LOCUS       NP_001412086             155 aa            linear   MAM 30-OCT-2023
DEFINITION  cathelicidin-1 precursor [Bos taurus].
ACCESSION   NP_001412086 XP_059736079
VERSION     NP_001412086.1
DBSOURCE    REFSEQ: accession NM_001425157.1
KEYWORDS    RefSeq.
SOURCE      Bos taurus (domestic cattle)
  ORGANISM  Bos taurus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Bovidae; Bovinae; Bos.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC114189.1.
            
            On Oct 30, 2023 this sequence version replaced XP_059736079.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC114189.1, DV800400.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN04019649 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Bos taurus"
                     /db_xref="taxon:9913"
                     /chromosome="22"
                     /map="22"
                     /breed="Hereford"
     Protein         1..155
                     /product="cathelicidin-1 precursor"
                     /calculated_mol_wt=14507
     sig_peptide     1..29
                     /inference="COORDINATES: ab initio prediction:SignalP:4.0"
                     /calculated_mol_wt=3111
     Region          30..130
                     /region_name="Cathelicidins"
                     /note="pfam00666"
                     /db_xref="CDD:395539"
     CDS             1..155
                     /gene="LOC132342071"
                     /coded_by="NM_001425157.1:14..481"
                     /db_xref="GeneID:132342071"
ORIGIN      
        1 metpraslsl grwslwllll glalpsasaq alsyreavlr avdqlneqss epniyrllel
       61 dqppqddedp dspkrvsfrv ketvcsrttq qppeqcdfke ngllkrcegt vtldqvrgnf
      121 ditcnnhqsi ritkqpwapp qaarlcrivv irvcr
//
LOCUS       NP_001077270             211 aa            linear   MAM 30-OCT-2023
DEFINITION  uncharacterized protein LOC789809 [Bos taurus].
ACCESSION   NP_001077270 XP_001255210
VERSION     NP_001077270.1
DBSOURCE    REFSEQ: accession NM_001083801.3
KEYWORDS    RefSeq.
SOURCE      Bos taurus (domestic cattle)
  ORGANISM  Bos taurus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Bovidae; Bovinae; Bos.
REFERENCE   1  (residues 1 to 211)
  AUTHORS   Kim J, Bergmann A, Lucas S, Stone R and Stubbs L.
  TITLE     Lineage-specific imprinting and evolution of the zinc-finger gene
            ZIM2
  JOURNAL   Genomics 84 (1), 47-58 (2004)
   PUBMED   15203203
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            NKLS02000018.1.
            
            On Apr 5, 2007 this sequence version replaced XP_001255210.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC134733.1, EV713028.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN02361203,
                                           SAMN03145413 [ECO:0006172]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Bos taurus"
                     /db_xref="taxon:9913"
                     /chromosome="18"
                     /map="18"
                     /breed="Hereford"
     Protein         1..211
                     /product="uncharacterized protein LOC789809"
                     /calculated_mol_wt=22737
     CDS             1..211
                     /gene="MGC157368"
                     /gene_synonym="Ast1"
                     /coded_by="NM_001083801.3:187..822"
                     /db_xref="GeneID:789809"
ORIGIN      
        1 mmlplstieg qeteevqtrp pekgvllsvk advprkkskr mkgtvsfrvl pfcpvvpwts
       61 sepalpappg havskparss pdaqtepgag gstcgammlp lstiegqete evqtrppekg
      121 allsenpdep rkkprgmkgr lsfnvlpfcp mpsvcftyyv epddpepepq vpsdgsksdp
      181 nctfvplpvl efrevkvcec plcclsfvta s
//
LOCUS       NP_001071446             425 aa            linear   MAM 30-OCT-2023
DEFINITION  kynurenine--oxoglutarate transaminase 1 [Bos taurus].
ACCESSION   NP_001071446 XP_607008 XP_872220 XP_884673 XP_884704 XP_884794
            XP_884825
VERSION     NP_001071446.2
DBSOURCE    REFSEQ: accession NM_001077978.2
KEYWORDS    RefSeq.
SOURCE      Bos taurus (domestic cattle)
  ORGANISM  Bos taurus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Bovidae; Bovinae; Bos.
REFERENCE   1  (residues 1 to 425)
  AUTHORS   Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D,
            Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Marcais G,
            Roberts M, Subramanian P, Yorke JA and Salzberg SL.
  TITLE     A whole-genome assembly of the domestic cow, Bos taurus
  JOURNAL   Genome Biol 10 (4), R42 (2009)
   PUBMED   19393038
REFERENCE   2  (residues 1 to 425)
  AUTHORS   Harhay GP, Sonstegard TS, Keele JW, Heaton MP, Clawson ML, Snelling
            WM, Wiedmann RT, Van Tassell CP and Smith TP.
  TITLE     Characterization of 954 bovine full-CDS cDNA sequences
  JOURNAL   BMC Genomics 6, 166 (2005)
   PUBMED   16305752
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 425)
  AUTHORS   Sonstegard TS, Capuco AV, White J, Van Tassell CP, Connor EE, Cho
            J, Sultana R, Shade L, Wray JE, Wells KD and Quackenbush J.
  TITLE     Analysis of bovine mammary gland EST and functional annotation of
            the Bos taurus gene index
  JOURNAL   Mamm Genome 13 (7), 373-379 (2002)
   PUBMED   12140684
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            NKLS02000011.1.
            
            On Oct 30, 2023 this sequence version replaced NP_001071446.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC126515.1, SRR5571265.17610.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA6648753,
                                           SAMEA6648754 [ECO:0006172]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Bos taurus"
                     /db_xref="taxon:9913"
                     /chromosome="11"
                     /map="11"
                     /breed="Hereford"
     Protein         1..425
                     /product="kynurenine--oxoglutarate transaminase 1"
                     /EC_number="2.6.1.64"
                     /note="glutamine transaminase K; kyneurenine
                     aminotransferase; cysteine conjugate-beta lyase,
                     cytoplasmic"
                     /calculated_mol_wt=47839
     Region          7..423
                     /region_name="AspB"
                     /note="Aspartate/methionine/tyrosine aminotransferase
                     [Amino acid transport and metabolism]; COG0436"
                     /db_xref="CDD:440205"
     CDS             1..425
                     /gene="KYAT1"
                     /gene_synonym="CCBL1"
                     /coded_by="NM_001077978.2:241..1518"
                     /db_xref="BGD:BT22786"
                     /db_xref="GeneID:528582"
ORIGIN      
        1 makrlqaqrl dgidysprve fvqlaseead vvnlgqgfpd fsppefavea fqhavsgdfm
       61 lnqytkafgy ppltkilanf fgkllgqeid plknvlvtvg aygalftafq alvdegdevi
      121 iiepffdcye pmtlmaggrp vfvslkpspt qkgepdsssn wqldptelas kftsrtkafi
      181 lntpnnplgk vfskeelelv aslcqqhdvv cisdevyqwm vfdgfqhisi aslpgmwert
      241 ltigsagktf svtgwkvgwv lgpdslmkhl rtvhqnsiyh catqgqaava qsfereqlhf
      301 grpssyfvql pqyiqrcrdh miqslqsmgf rpvipqgsyf litdisdfkn kmpdlpgaag
      361 epydrrfvkw miknkglvav pvsiffslph qkffdhyirf cfvkdestlr amdqklqkwk
      421 aeltp
//
LOCUS       NP_001096722             193 aa            linear   MAM 30-OCT-2023
DEFINITION  zinc finger protein 740 [Bos taurus].
ACCESSION   NP_001096722 XP_024847497 XP_594480
VERSION     NP_001096722.2
DBSOURCE    REFSEQ: accession NM_001103252.2
KEYWORDS    RefSeq.
SOURCE      Bos taurus (domestic cattle)
  ORGANISM  Bos taurus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Bovidae; Bovinae; Bos.
REFERENCE   1  (residues 1 to 193)
  AUTHORS   Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D,
            Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Marcais G,
            Roberts M, Subramanian P, Yorke JA and Salzberg SL.
  TITLE     A whole-genome assembly of the domestic cow, Bos taurus
  JOURNAL   Genome Biol 10 (4), R42 (2009)
   PUBMED   19393038
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            NKLS02000005.1.
            
            On or before Oct 30, 2023 this sequence version replaced
            XP_024847497.1, NP_001096722.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: GGUY01025228.1, SRR6764281.11699.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN04019642, SAMN04019647
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Bos taurus"
                     /db_xref="taxon:9913"
                     /chromosome="5"
                     /map="5"
                     /breed="Hereford"
     Protein         1..193
                     /product="zinc finger protein 740"
                     /calculated_mol_wt=21710
     Region          103..123
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(108,110,112,114..115,118..119,122,136,138,142..143,
                     146..147,150,164,166,168,170..171,174..175)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          115..140
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          131..151
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          143..168
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          159..177
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..193
                     /gene="ZNF740"
                     /coded_by="NM_001103252.2:436..1017"
                     /db_xref="BGD:BT26096"
                     /db_xref="GeneID:516327"
ORIGIN      
        1 maqasllace glagvslvpt aaskkmmlsq iaskqaenge ragspdvlrc ssqghrkdsd
       61 ksrsrkddds laeashskkt vkkvvvveqn gsfqvkipkn fvcehcfgaf rssyhlkrhi
      121 lihtgekpfe cdicdmrfiq kyhlerhkrv hsgekpyqce rchqcfsrtd rllrhkrmcq
      181 gcqsktsdgq fsl
//
LOCUS       NP_001012705             147 aa            linear   MAM 30-OCT-2023
DEFINITION  calcium-dependent phospholipase A2 PLA2G2D4 precursor [Bos taurus].
ACCESSION   NP_001012705 NP_001015888
VERSION     NP_001012705.3
DBSOURCE    REFSEQ: accession NM_001012687.4
KEYWORDS    RefSeq.
SOURCE      Bos taurus (domestic cattle)
  ORGANISM  Bos taurus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Bovidae; Bovinae; Bos.
REFERENCE   1  (residues 1 to 147)
  AUTHORS   Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D,
            Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Marcais G,
            Roberts M, Subramanian P, Yorke JA and Salzberg SL.
  TITLE     A whole-genome assembly of the domestic cow, Bos taurus
  JOURNAL   Genome Biol 10 (4), R42 (2009)
   PUBMED   19393038
REFERENCE   2  (residues 1 to 147)
  AUTHORS   Golik M, Cohen-Zinder M, Loor JJ, Drackley JK, Band MR, Lewin HA,
            Weller JI, Ron M and Seroussi E.
  TITLE     Accelerated expansion of group IID-like phospholipase A2 genes in
            Bos taurus
  JOURNAL   Genomics 87 (4), 527-533 (2006)
   PUBMED   16469480
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            NKLS02000002.1.
            
            On or before Oct 30, 2023 this sequence version replaced
            NP_001015888.1, NP_001012705.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AJ850105.1, BC102124.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN03145426, SAMN03145428
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Bos taurus"
                     /db_xref="taxon:9913"
                     /chromosome="2"
                     /map="2"
                     /breed="Hereford"
     Protein         1..147
                     /product="calcium-dependent phospholipase A2 PLA2G2D4
                     precursor"
                     /EC_number="3.1.1.4"
                     /note="putative calcium-dependent phospholipase A2;
                     calcium-dependent phospholipase A2 PLA2G2D5"
                     /calculated_mol_wt=14757
     sig_peptide     1..20
                     /inference="COORDINATES: ab initio prediction:SignalP:4.0"
                     /calculated_mol_wt=1946
     Region          21..136
                     /region_name="PLA2c"
                     /note="Phospholipase A2, a family of secretory and
                     cytosolic enzymes; the latter are either Ca dependent or
                     Ca independent. PLA2 cleaves the sn-2 position of the
                     glycerol backbone of phospholipids (PC or
                     phosphatidylethanolamine), usually in a
                     metal-dependent...; cd00125"
                     /db_xref="CDD:153091"
     Site            order(22,25,29,38,50,82)
                     /site_type="active"
                     /note="putative hydrophobic channel [active]"
                     /db_xref="CDD:153091"
     Site            order(47,49,51,68)
                     /site_type="other"
                     /note="primary metal binding site"
                     /db_xref="CDD:153091"
     Site            order(49,67..68,71,86,112)
                     /site_type="active"
                     /note="catalytic network [active]"
                     /db_xref="CDD:153091"
     CDS             1..147
                     /gene="PLA2G2D4"
                     /gene_synonym="PLA2G2D5"
                     /coded_by="NM_001012687.4:33..476"
                     /db_xref="BGD:BT10414"
                     /db_xref="GeneID:503625"
ORIGIN      
        1 mglsllcall vfagvapaea dildlnemvr qvtgkipiff yshygcycrk ggqgqprdat
       61 drccrehdcc yrhlksdncd isfdhydytf fqgkvqcstk gswceqqlca cdktlafclq
      121 rnlntyknhl rrlsrceget lacppss
//
LOCUS       NP_001101207            1036 aa            linear   ROD 30-OCT-2023
DEFINITION  integrin alpha-4 [Rattus norvegicus].
ACCESSION   NP_001101207 XP_001067316 XP_230033
VERSION     NP_001101207.1
DBSOURCE    REFSEQ: accession NM_001107737.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (residues 1 to 1036)
  AUTHORS   Fu C, Zhang Y, Xi WJ, Xu K, Meng F, Ma T, Li W, Wu L and Chen Z.
  TITLE     Dahuang Zhechong pill attenuates hepatic sinusoidal capillarization
            in liver cirrhosis and hepatocellular carcinoma rat model via the
            MK/integrin signaling pathway
  JOURNAL   J Ethnopharmacol 308, 116191 (2023)
   PUBMED   36731809
  REMARK    GeneRIF: Dahuang Zhechong pill attenuates hepatic sinusoidal
            capillarization in liver cirrhosis and hepatocellular carcinoma rat
            model via the MK/integrin signaling pathway.
REFERENCE   2  (residues 1 to 1036)
  AUTHORS   Ran Y, Dong Y, Li Y, Xie J, Zeng S, Liang C, Dai W, Tang W, Wu Y
            and Yu S.
  TITLE     Mesenchymal stem cell aggregation mediated by integrin
            alpha4/VCAM-1 after intrathecal transplantation in MCAO rats
  JOURNAL   Stem Cell Res Ther 13 (1), 507 (2022)
   PUBMED   36273220
  REMARK    GeneRIF: Mesenchymal stem cell aggregation mediated by integrin
            alpha4/VCAM-1 after intrathecal transplantation in MCAO rats.
            Publication Status: Online-Only
REFERENCE   3  (residues 1 to 1036)
  AUTHORS   Ma F, Li T, Zhang H and Wu G.
  TITLE     MiR-30s Family Inhibit the Proliferation and Apoptosis in Human
            Coronary Artery Endothelial Cells Through Targeting the 3'UTR
            Region of ITGA4 and PLCG1
  JOURNAL   J Cardiovasc Pharmacol 68 (5), 327-333 (2016)
   PUBMED   27464494
REFERENCE   4  (residues 1 to 1036)
  AUTHORS   Zhang K, Pan Y, Qi J, Yue J, Zhang M, Xu C, Li G and Chen J.
  TITLE     Disruption of disulfide restriction at integrin knees induces
            activation and ligand-independent signaling of alphabeta
  JOURNAL   J Cell Sci 126 (Pt 21), 5030-5041 (2013)
   PUBMED   23986478
REFERENCE   5  (residues 1 to 1036)
  AUTHORS   Kim SV, Xiang WV, Kwak C, Yang Y, Lin XW, Ota M, Sarpel U, Rifkin
            DB, Xu R and Littman DR.
  TITLE     GPR15-mediated homing controls immune homeostasis in the large
            intestine mucosa
  JOURNAL   Science 340 (6139), 1456-1459 (2013)
   PUBMED   23661644
REFERENCE   6  (residues 1 to 1036)
  AUTHORS   Yang JT, Rayburn H and Hynes RO.
  TITLE     Cell adhesion events mediated by alpha 4 integrins are essential in
            placental and cardiac development
  JOURNAL   Development 121 (2), 549-560 (1995)
   PUBMED   7539359
REFERENCE   7  (residues 1 to 1036)
  AUTHORS   Yang XD, Michie SA, Tisch R, Karin N, Steinman L and McDevitt HO.
  TITLE     A predominant role of integrin alpha 4 in the spontaneous
            development of autoimmune diabetes in nonobese diabetic mice
  JOURNAL   Proc Natl Acad Sci U S A 91 (26), 12604-12608 (1994)
   PUBMED   7528925
REFERENCE   8  (residues 1 to 1036)
  AUTHORS   Turunen JP, Ustinov J and Renkonen R.
  TITLE     Adhesion molecules involved in protein kinase A- and C-dependent
            lymphocyte adherence to microvascular endothelial cells
  JOURNAL   Scand J Immunol 37 (3), 282-288 (1993)
   PUBMED   7680140
REFERENCE   9  (residues 1 to 1036)
  AUTHORS   Mulligan MS, Johnson KJ, Todd RF 3rd, Issekutz TB, Miyasaka M,
            Tamatani T, Smith CW, Anderson DC and Ward PA.
  TITLE     Requirements for leukocyte adhesion molecules in nephrotoxic
            nephritis
  JOURNAL   J Clin Invest 91 (2), 577-587 (1993)
   PUBMED   7679412
REFERENCE   10 (residues 1 to 1036)
  AUTHORS   Ryan DH, Nuccie BL, Abboud CN and Winslow JM.
  TITLE     Vascular cell adhesion molecule-1 and the integrin VLA-4 mediate
            adhesion of human B cell precursors to cultured bone marrow
            adherent cells
  JOURNAL   J Clin Invest 88 (3), 995-1004 (1991)
   PUBMED   1715889
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473949.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XP_230033.4, XP_001067316.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760384,
                              SAMEA5760386 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1036
                     /organism="Rattus norvegicus"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q24"
     Protein         1..1036
                     /product="integrin alpha-4"
                     /note="integrin, alpha 4"
                     /calculated_mol_wt=115448
     Region          52..109
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          307..355
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          370..422
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          433..483
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          468..906
                     /region_name="Integrin_alpha2"
                     /note="Integrin alpha; pfam08441"
                     /db_xref="CDD:462478"
     CDS             1..1036
                     /gene="Itga4"
                     /coded_by="NM_001107737.1:236..3346"
                     /db_xref="GeneID:311144"
                     /db_xref="RGD:1593249"
ORIGIN      
        1 maaeamcrpr prgvalqeav mlllyfgvhf rvptghsynl dpesallyqg psgtlfgysv
       61 vlhshgtkrw livgaptasw lanasvvnpg aiyrcrigkn pnqiceqlql gspsgepcgk
      121 tcleerdnqw lgvtisrqpg engsivtcgh rwknifymkn nnklptgvcy gmpsdlrtel
      181 skrmapcyqd fvrkfgenfa scqagissfy tqdlivmgap gssywtgsvf vynittnkyk
      241 afvdrqnqvk fgsylgysvg aghfrnphtt evvggapqhe qigkayifsi deseltivye
      301 mkgkklgsyf gasvcavdln adgfsdllvg apmqstiree grvfvyinsg mgavmvemer
      361 vlvgsdkyaa rfgesmanlg didndgfedi aigapqeddl rgavyiyngr vdgisstysq
      421 riegrqisqs lrmfgqsisg qidadnngyv dvavgafqsd savllrtrpv viveaslshp
      481 esvnrtkfdc tengllsvcv dlklcfsykg kevpgyivlf ynvsldvhrk aespsrfyff
      541 sngtsdmitr sirvsssgek crthqafmrk dvrdiltpiq veatyhlghh vitkrnteef
      601 pplqpilqqk kekdiirkti nfarfcayen csadlqvsak vgflkpyenk tylavgsmkt
      661 imlnvslfna gddayettln vqlptglyfi kildleekqi ncdvtessgv vklacslgyi
      721 yvdrlsridi sflldvssls rahedlsinv hascenegkl dqvkdnrvtl viplryevml
      781 avhgfvtpts fvygsseene pemcmaekln ltfhvintgi smapnvsvki mvpnsflprn
      841 dklfnvldvq atmgqcqfeh ygrecalaqq kgiagtltdl vkflsktdkr llycmkadrh
      901 cldflcnfgk mesgkeasvh iqlegrpsvl emdetsslkf eikatafpep hpkvielnkd
      961 eniahvyleg lhhqrpkrhf tivivtisll lglivlllis cvmwkagffk rqyksilqee
     1021 nrrdswsyvn sksndd
//
LOCUS       NP_001019927             559 aa            linear   ROD 30-OCT-2023
DEFINITION  YTH domain-containing family protein 1 [Rattus norvegicus].
ACCESSION   NP_001019927 XP_215979
VERSION     NP_001019927.1
DBSOURCE    REFSEQ: accession NM_001024756.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (residues 1 to 559)
  AUTHORS   Huang Y, Yang Y, Ye C, Liu Z and Wei F.
  TITLE     The m6A Reader YTHDF1 Improves Sevoflurane-Induced Neuronal
            Pyroptosis and Cognitive Dysfunction Through Augmenting CREB-BDNF
            Signaling
  JOURNAL   Neurochem Res 48 (12), 3625-3638 (2023)
   PUBMED   37572160
  REMARK    GeneRIF: The m[6]A Reader YTHDF1 Improves Sevoflurane-Induced
            Neuronal Pyroptosis and Cognitive Dysfunction Through Augmenting
            CREB-BDNF Signaling.
REFERENCE   2  (residues 1 to 559)
  AUTHORS   Wang H, Fu L, Li Y, Wei L, Gu X, Li H, Li J and Wen S.
  TITLE     m6A methyltransferase WTAP regulates myocardial ischemia
            reperfusion injury through YTHDF1/FOXO3a signaling
  JOURNAL   Apoptosis 28 (5-6), 830-839 (2023)
   PUBMED   36894806
  REMARK    GeneRIF: m6A methyltransferase WTAP regulates myocardial ischemia
            reperfusion injury through YTHDF1/FOXO3a signaling.
REFERENCE   3  (residues 1 to 559)
  AUTHORS   Xing Y, Cheng D, Shi C and Shen Z.
  TITLE     The protective role of YTHDF1-knock down macrophages on the immune
            paralysis of severe sepsis rats with ECMO
  JOURNAL   Microvasc Res 137, 104178 (2021)
   PUBMED   34015275
  REMARK    GeneRIF: The protective role of YTHDF1-knock down macrophages on
            the immune paralysis of severe sepsis rats with ECMO.
REFERENCE   4  (residues 1 to 559)
  AUTHORS   Zeng Y, Huang T, Zuo W, Wang D, Xie Y, Wang X, Xiao Z, Chen Z, Liu
            Q, Liu N and Xiao Y.
  TITLE     Integrated analysis of m6A mRNA methylation in rats with
            monocrotaline-induced pulmonary arterial hypertension
  JOURNAL   Aging (Albany NY) 13 (14), 18238-18256 (2021)
   PUBMED   34310344
  REMARK    GeneRIF: Integrated analysis of m(6)A mRNA methylation in rats with
            monocrotaline-induced pulmonary arterial hypertension.
REFERENCE   5  (residues 1 to 559)
  AUTHORS   Zhuang M, Li X, Zhu J, Zhang J, Niu F, Liang F, Chen M, Li D, Han P
            and Ji SJ.
  TITLE     The m6A reader YTHDF1 regulates axon guidance through translational
            control of Robo3.1 expression
  JOURNAL   Nucleic Acids Res 47 (9), 4765-4777 (2019)
   PUBMED   30843071
REFERENCE   6  (residues 1 to 559)
  AUTHORS   Xu C, Liu K, Ahmed H, Loppnau P, Schapira M and Min J.
  TITLE     Structural Basis for the Discriminative Recognition of
            N6-Methyladenosine RNA by the Human YT521-B Homology Domain Family
            of Proteins
  JOURNAL   J Biol Chem 290 (41), 24902-24913 (2015)
   PUBMED   26318451
REFERENCE   7  (residues 1 to 559)
  AUTHORS   Wang X, Zhao BS, Roundtree IA, Lu Z, Han D, Ma H, Weng X, Chen K,
            Shi H and He C.
  TITLE     N(6)-methyladenosine Modulates Messenger RNA Translation Efficiency
  JOURNAL   Cell 161 (6), 1388-1399 (2015)
   PUBMED   26046440
REFERENCE   8  (residues 1 to 559)
  AUTHORS   Wang X, Lu Z, Gomez A, Hon GC, Yue Y, Han D, Fu Y, Parisien M, Dai
            Q, Jia G, Ren B, Pan T and He C.
  TITLE     N6-methyladenosine-dependent regulation of messenger RNA stability
  JOURNAL   Nature 505 (7481), 117-120 (2014)
   PUBMED   24284625
REFERENCE   9  (residues 1 to 559)
  AUTHORS   Baltz AG, Munschauer M, Schwanhausser B, Vasile A, Murakawa Y,
            Schueler M, Youngs N, Penfold-Brown D, Drew K, Milek M, Wyler E,
            Bonneau R, Selbach M, Dieterich C and Landthaler M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   10 (residues 1 to 559)
  AUTHORS   Castello A, Fischer B, Eichelbaum K, Horos R, Beckmann BM, Strein
            C, Davey NE, Humphreys DT, Preiss T, Steinmetz LM, Krijgsveld J and
            Hentze MW.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC097360.1.
            
            On Jun 10, 2005 this sequence version replaced XP_215979.3.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC097360.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760433
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Rattus norvegicus"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q43"
     Protein         1..559
                     /product="YTH domain-containing family protein 1"
                     /note="YTH domain family 1; YTH domain family protein 1;
                     YTH domain family, member 1; YTH N(6)-methyladenosine RNA
                     binding protein 1"
                     /calculated_mol_wt=60779
     Region          390..523
                     /region_name="YTH"
                     /note="YT521-B-like domain; pfam04146"
                     /db_xref="CDD:461195"
     CDS             1..559
                     /gene="Ythdf1"
                     /coded_by="NM_001024756.1:145..1824"
                     /db_xref="GeneID:296467"
                     /db_xref="RGD:1308932"
ORIGIN      
        1 msatsvdpqr tkgqenkvqn gslhqkdavh dndfepylsg qsnpsnsyps msdpylssyy
       61 ppsigfpysl seapwstagd ppipylttyg qlsngdhhfm hdavfgqpgg lgnniyqhrf
      121 nffpenpafs awgtsgsqgq qtqssaygss ytyppsslgg tvvdgqtgfh sdtlnkapgm
      181 nsleqgmvgl kigdvttsav ktvgsvvnsv altgvlsgng gtnvnmpvsk ptswaaiask
      241 pakpqpkmkt ksgpivggtl ppppikhnmd igtwdnkgpa pkasapqqtp spqaapqpqq
      301 vaqplpvqpp plvqpqyqsp qqplqprwva prnrnaafgq sggansdsns vgsaqptsap
      361 sveshpvlek lkaahsynpk efdwnlksgr vfiiksysed dihrsikysi wcstehgnkr
      421 ldgafrsmss kgpvyllfsv ngsghfcgva emkspvdygt sagvwsqdkw kgkfdvkwif
      481 vkdvpnnqlr hirlenndnk pvtnsrdtqe vplekakqvl kiiasykhtt sifddfshye
      541 krqeeeevvr kerqnrnkq
//
LOCUS       NP_001068611             146 aa            linear   MAM 31-OCT-2023
DEFINITION  granulysin precursor [Bos taurus].
ACCESSION   NP_001068611 XP_873398
VERSION     NP_001068611.1
DBSOURCE    REFSEQ: accession NM_001075143.2
KEYWORDS    RefSeq.
SOURCE      Bos taurus (domestic cattle)
  ORGANISM  Bos taurus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Bovidae; Bovinae; Bos.
REFERENCE   1  (residues 1 to 146)
  AUTHORS   Ohta T, Koshi K, Ushizawa K, Hosoe M, Takahashi T, Yamaguchi T,
            Kizaki K and Hashizume K.
  TITLE     Expression profiles of perforin, granzyme B and granulysin genes
            during the estrous cycle and gestation in the bovine endometrium
  JOURNAL   Anim Sci J 85 (7), 763-769 (2014)
   PUBMED   24798459
  REMARK    GeneRIF: Intercaruncular epithelium granulysin may play important
            roles in the establishment and maintenance of gestation during
            normal pregnancy.
REFERENCE   2  (residues 1 to 146)
  AUTHORS   Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D,
            Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Marcais G,
            Roberts M, Subramanian P, Yorke JA and Salzberg SL.
  TITLE     A whole-genome assembly of the domestic cow, Bos taurus
  JOURNAL   Genome Biol 10 (4), R42 (2009)
   PUBMED   19393038
REFERENCE   3  (residues 1 to 146)
  AUTHORS   Endsley JJ, Furrer JL, Endsley MA, McIntosh MA, Maue AC, Waters WR,
            Lee DR and Estes DM.
  TITLE     Characterization of bovine homologues of granulysin and NK-lysin
  JOURNAL   J Immunol 173 (4), 2607-2614 (2004)
   PUBMED   15294977
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            NKLS02000011.1.
            
            On Oct 4, 2006 this sequence version replaced XP_873398.1.
            
            ##Evidence-Data-START##
            CDS exon combination :: GGVE01069043.1, GGVC01121545.1
                                    [ECO:0000331]
            RNAseq introns       :: partial sample support SAMN02361203,
                                    SAMN03145413 [ECO:0000350]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Bos taurus"
                     /db_xref="taxon:9913"
                     /chromosome="11"
                     /map="11"
                     /breed="Hereford"
     Protein         1..146
                     /product="granulysin precursor"
                     /note="granulysin/NK-lysin-like protein"
                     /calculated_mol_wt=13834
     sig_peptide     1..20
                     /inference="COORDINATES: ab initio prediction:SignalP:4.0"
                     /calculated_mol_wt=2056
     Region          66..138
                     /region_name="SapB"
                     /note="Saposin (B) Domains; smart00741"
                     /db_xref="CDD:214797"
     CDS             1..146
                     /gene="GNLY"
                     /coded_by="NM_001075143.2:146..586"
                     /db_xref="BGD:BT22868"
                     /db_xref="GeneID:404173"
ORIGIN      
        1 mtswavllit svllvapgla fsgltpeshd qatahlcdgd elcqglaled pqgdlllqge
       61 elslrcgscr riiqhlmdkl gdqpdentvi eeaskvcskm rllkglcksi mkkflrtiae
      121 divagktsqv icvdikmcks kpvgfi
//
LOCUS       NP_001411724             678 aa            linear   ROD 31-OCT-2023
DEFINITION  predicted pseudogene 381 [Mus musculus].
ACCESSION   NP_001411724
VERSION     NP_001411724.1
DBSOURCE    REFSEQ: accession NM_001424795.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 678)
  AUTHORS   McKee AE, Minet E, Stern C, Riahi S, Stiles CD and Silver PA.
  TITLE     A genome-wide in situ hybridization map of RNA-binding proteins
            reveals anatomically restricted expression in the developing mouse
            brain
  JOURNAL   BMC Dev Biol 5, 14 (2005)
   PUBMED   16033648
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL732370.10.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5189685.244010.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X"
     Protein         1..678
                     /product="predicted pseudogene 381"
                     /note="high density lipoprotein (HDL) binding protein
                     pseudogene"
                     /calculated_mol_wt=75859
     Region          70..137
                     /region_name="KH-I"
                     /note="K homology (KH) RNA-binding domain, type I;
                     cl00098"
                     /db_xref="CDD:469614"
     Region          141..206
                     /region_name="KH-I"
                     /note="K homology (KH) RNA-binding domain, type I;
                     cl00098"
                     /db_xref="CDD:469614"
     Region          217..281
                     /region_name="KH-I"
                     /note="K homology (KH) RNA-binding domain, type I;
                     cl00098"
                     /db_xref="CDD:469614"
     Region          290..383
                     /region_name="KH-I"
                     /note="K homology (KH) RNA-binding domain, type I;
                     cl00098"
                     /db_xref="CDD:469614"
     Region          385..460
                     /region_name="KH-I"
                     /note="K homology (KH) RNA-binding domain, type I;
                     cl00098"
                     /db_xref="CDD:469614"
     Region          466..538
                     /region_name="KH-I"
                     /note="K homology (KH) RNA-binding domain, type I;
                     cl00098"
                     /db_xref="CDD:469614"
     Region          540..606
                     /region_name="KH-I"
                     /note="K homology (KH) RNA-binding domain, type I;
                     cl00098"
                     /db_xref="CDD:469614"
     CDS             1..678
                     /gene="Gm381"
                     /gene_synonym="Gm46686"
                     /coded_by="NM_001424795.1:319..2355"
                     /db_xref="GeneID:214308"
                     /db_xref="MGI:MGI:2685227"
ORIGIN      
        1 mtskrqyivy pnrslqrenh ltnlnsrrkv nfpssscnse nnisirkpen heichnwilp
       61 ipknaakdse veipispslh rsltdskksl igsiieecgk vhihfpsnnq gpqkviisgs
      121 meivektkkk llqlaeeeqa ksysvaipvk skyhqflmsk nggnlqkice ktgariifpt
      181 fknkdqesvt iigteeavkn vqkevevllk nledvvedsi lispkfhnyf vmqrgqllre
      241 iikeyggvfi tfsyvgkqst kvtikgakac veaakkhiqg ifdplgsqvt tqcvippkfh
      301 pfimgpicsr iqqiardckv qikfpdteka irkthpevqk mgkekggkni kkpastspkk
      361 sdtmsisgka enckeaaqal etlvpvtaev qvpfhlhpyi ighkgsglhk likdfevhiq
      421 vsqpggnfhi isimgleanv kqvktklqnq vkalqmeldd qplrnfrktf rldpkyhski
      481 fgnkgilisq icteydvtvh fskkgnnsiq dqitiagski nilgaydaim nllhkiektv
      541 skeiplnhhv canifgfgak siqkimeqfq vdvrvhskgs csnssivvsg sscnvqkaie
      601 yilslekhfl svgksdppld hhkhgglynt aartstsfgk rnslrnakpt typpradnse
      661 dfpklkhqts pkfqpwrp
//
LOCUS       NP_001411649             167 aa            linear   ROD 31-OCT-2023
DEFINITION  2-cell-stage, variable group, member 3-like [Mus musculus].
ACCESSION   NP_001411649 XP_006517795
VERSION     NP_001411649.1
DBSOURCE    REFSEQ: accession NM_001424720.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 167)
  AUTHORS   Katayama S, Tomaru Y, Kasukawa T, Waki K, Nakanishi M, Nakamura M,
            Nishida H, Yap CC, Suzuki M, Kawai J, Suzuki H, Carninci P,
            Hayashizaki Y, Wells C, Frith M, Ravasi T, Pang KC, Hallinan J,
            Mattick J, Hume DA, Lipovich L, Batalov S, Engstrom PG, Mizuno Y,
            Faghihi MA, Sandelin A, Chalk AM, Mottagui-Tabar S, Liang Z,
            Lenhard B and Wahlestedt C.
  CONSRTM   RIKEN Genome Exploration Research Group; Genome Science Group
            (Genome Network Project Core Group); FANTOM Consortium
  TITLE     Antisense transcription in the mammalian transcriptome
  JOURNAL   Science 309 (5740), 1564-1566 (2005)
   PUBMED   16141073
REFERENCE   2  (residues 1 to 167)
  AUTHORS   Carninci P, Kasukawa T, Katayama S, Gough J, Frith MC, Maeda N,
            Oyama R, Ravasi T, Lenhard B, Wells C, Kodzius R, Shimokawa K,
            Bajic VB, Brenner SE, Batalov S, Forrest AR, Zavolan M, Davis MJ,
            Wilming LG, Aidinis V, Allen JE, Ambesi-Impiombato A, Apweiler R,
            Aturaliya RN, Bailey TL, Bansal M, Baxter L, Beisel KW, Bersano T,
            Bono H, Chalk AM, Chiu KP, Choudhary V, Christoffels A, Clutterbuck
            DR, Crowe ML, Dalla E, Dalrymple BP, de Bono B, Della Gatta G, di
            Bernardo D, Down T, Engstrom P, Fagiolini M, Faulkner G, Fletcher
            CF, Fukushima T, Furuno M, Futaki S, Gariboldi M, Georgii-Hemming
            P, Gingeras TR, Gojobori T, Green RE, Gustincich S, Harbers M,
            Hayashi Y, Hensch TK, Hirokawa N, Hill D, Huminiecki L, Iacono M,
            Ikeo K, Iwama A, Ishikawa T, Jakt M, Kanapin A, Katoh M, Kawasawa
            Y, Kelso J, Kitamura H, Kitano H, Kollias G, Krishnan SP, Kruger A,
            Kummerfeld SK, Kurochkin IV, Lareau LF, Lazarevic D, Lipovich L,
            Liu J, Liuni S, McWilliam S, Madan Babu M, Madera M, Marchionni L,
            Matsuda H, Matsuzawa S, Miki H, Mignone F, Miyake S, Morris K,
            Mottagui-Tabar S, Mulder N, Nakano N, Nakauchi H, Ng P, Nilsson R,
            Nishiguchi S, Nishikawa S, Nori F, Ohara O, Okazaki Y, Orlando V,
            Pang KC, Pavan WJ, Pavesi G, Pesole G, Petrovsky N, Piazza S, Reed
            J, Reid JF, Ring BZ, Ringwald M, Rost B, Ruan Y, Salzberg SL,
            Sandelin A, Schneider C, Schonbach C, Sekiguchi K, Semple CA, Seno
            S, Sessa L, Sheng Y, Shibata Y, Shimada H, Shimada K, Silva D,
            Sinclair B, Sperling S, Stupka E, Sugiura K, Sultana R, Takenaka Y,
            Taki K, Tammoja K, Tan SL, Tang S, Taylor MS, Tegner J, Teichmann
            SA, Ueda HR, van Nimwegen E, Verardo R, Wei CL, Yagi K, Yamanishi
            H, Zabarovsky E, Zhu S, Zimmer A, Hide W, Bult C, Grimmond SM,
            Teasdale RD, Liu ET, Brusic V, Quackenbush J, Wahlestedt C, Mattick
            JS, Hume DA, Kai C, Sasaki D, Tomaru Y, Fukuda S, Kanamori-Katayama
            M, Suzuki M, Aoki J, Arakawa T, Iida J, Imamura K, Itoh M, Kato T,
            Kawaji H, Kawagashira N, Kawashima T, Kojima M, Kondo S, Konno H,
            Nakano K, Ninomiya N, Nishio T, Okada M, Plessy C, Shibata K,
            Shiraki T, Suzuki S, Tagami M, Waki K, Watahiki A, Okamura-Oho Y,
            Suzuki H, Kawai J and Hayashizaki Y.
  CONSRTM   FANTOM Consortium; RIKEN Genome Exploration Research Group and
            Genome Science Group (Genome Network Project Core Group)
  TITLE     The transcriptional landscape of the mammalian genome
  JOURNAL   Science 309 (5740), 1559-1563 (2005)
   PUBMED   16141072
  REMARK    Erratum:[Science. 2006 Mar 24;311(5768):1713]
REFERENCE   3  (residues 1 to 167)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   4  (residues 1 to 167)
  AUTHORS   Okazaki Y, Furuno M, Kasukawa T, Adachi J, Bono H, Kondo S, Nikaido
            I, Osato N, Saito R, Suzuki H, Yamanaka I, Kiyosawa H, Yagi K,
            Tomaru Y, Hasegawa Y, Nogami A, Schonbach C, Gojobori T, Baldarelli
            R, Hill DP, Bult C, Hume DA, Quackenbush J, Schriml LM, Kanapin A,
            Matsuda H, Batalov S, Beisel KW, Blake JA, Bradt D, Brusic V,
            Chothia C, Corbani LE, Cousins S, Dalla E, Dragani TA, Fletcher CF,
            Forrest A, Frazer KS, Gaasterland T, Gariboldi M, Gissi C, Godzik
            A, Gough J, Grimmond S, Gustincich S, Hirokawa N, Jackson IJ,
            Jarvis ED, Kanai A, Kawaji H, Kawasawa Y, Kedzierski RM, King BL,
            Konagaya A, Kurochkin IV, Lee Y, Lenhard B, Lyons PA, Maglott DR,
            Maltais L, Marchionni L, McKenzie L, Miki H, Nagashima T, Numata K,
            Okido T, Pavan WJ, Pertea G, Pesole G, Petrovsky N, Pillai R,
            Pontius JU, Qi D, Ramachandran S, Ravasi T, Reed JC, Reed DJ, Reid
            J, Ring BZ, Ringwald M, Sandelin A, Schneider C, Semple CA, Setou
            M, Shimada K, Sultana R, Takenaka Y, Taylor MS, Teasdale RD, Tomita
            M, Verardo R, Wagner L, Wahlestedt C, Wang Y, Watanabe Y, Wells C,
            Wilming LG, Wynshaw-Boris A, Yanagisawa M, Yang I, Yang L, Yuan Z,
            Zavolan M, Zhu Y, Zimmer A, Carninci P, Hayatsu N,
            Hirozane-Kishikawa T, Konno H, Nakamura M, Sakazume N, Sato K,
            Shiraki T, Waki K, Kawai J, Aizawa K, Arakawa T, Fukuda S, Hara A,
            Hashizume W, Imotani K, Ishii Y, Itoh M, Kagawa I, Miyazaki A,
            Sakai K, Sasaki D, Shibata K, Shinagawa A, Yasunishi A, Yoshino M,
            Waterston R, Lander ES, Rogers J, Birney E and Hayashizaki Y.
  CONSRTM   FANTOM Consortium; RIKEN Genome Exploration Research Group Phase I
            & II Team
  TITLE     Analysis of the mouse transcriptome based on functional annotation
            of 60,770 full-length cDNAs
  JOURNAL   Nature 420 (6915), 563-573 (2002)
   PUBMED   12466851
REFERENCE   5  (residues 1 to 167)
  AUTHORS   Kawai J, Shinagawa A, Shibata K, Yoshino M, Itoh M, Ishii Y,
            Arakawa T, Hara A, Fukunishi Y, Konno H, Adachi J, Fukuda S, Aizawa
            K, Izawa M, Nishi K, Kiyosawa H, Kondo S, Yamanaka I, Saito T,
            Okazaki Y, Gojobori T, Bono H, Kasukawa T, Saito R, Kadota K,
            Matsuda H, Ashburner M, Batalov S, Casavant T, Fleischmann W,
            Gaasterland T, Gissi C, King B, Kochiwa H, Kuehl P, Lewis S, Matsuo
            Y, Nikaido I, Pesole G, Quackenbush J, Schriml LM, Staubli F,
            Suzuki R, Tomita M, Wagner L, Washio T, Sakai K, Okido T, Furuno M,
            Aono H, Baldarelli R, Barsh G, Blake J, Boffelli D, Bojunga N,
            Carninci P, de Bonaldo MF, Brownstein MJ, Bult C, Fletcher C,
            Fujita M, Gariboldi M, Gustincich S, Hill D, Hofmann M, Hume DA,
            Kamiya M, Lee NH, Lyons P, Marchionni L, Mashima J, Mazzarelli J,
            Mombaerts P, Nordone P, Ring B, Ringwald M, Rodriguez I, Sakamoto
            N, Sasaki H, Sato K, Schonbach C, Seya T, Shibata Y, Storch KF,
            Suzuki H, Toyo-oka K, Wang KH, Weitz C, Whittaker C, Wilming L,
            Wynshaw-Boris A, Yoshida K, Hasegawa Y, Kawaji H, Kohtsuki S and
            Hayashizaki Y.
  CONSRTM   RIKEN Genome Exploration Research Group Phase II Team and the
            FANTOM Consortium
  TITLE     Functional annotation of a full-length mouse cDNA collection
  JOURNAL   Nature 409 (6821), 685-690 (2001)
   PUBMED   11217851
REFERENCE   6  (residues 1 to 167)
  AUTHORS   Shibata K, Itoh M, Aizawa K, Nagaoka S, Sasaki N, Carninci P, Konno
            H, Akiyama J, Nishi K, Kitsunai T, Tashiro H, Itoh M, Sumi N, Ishii
            Y, Nakamura S, Hazama M, Nishine T, Harada A, Yamamoto R, Matsumoto
            H, Sakaguchi S, Ikegami T, Kashiwagi K, Fujiwake S, Inoue K and
            Togawa Y.
  TITLE     RIKEN integrated sequence analysis (RISA) system--384-format
            sequencing pipeline with 384 multicapillary sequencer
  JOURNAL   Genome Res 10 (11), 1757-1771 (2000)
   PUBMED   11076861
REFERENCE   7  (residues 1 to 167)
  AUTHORS   Carninci P, Shibata Y, Hayatsu N, Sugahara Y, Shibata K, Itoh M,
            Konno H, Okazaki Y, Muramatsu M and Hayashizaki Y.
  TITLE     Normalization and subtraction of cap-trapper-selected cDNAs to
            prepare full-length cDNA libraries for rapid discovery of new genes
  JOURNAL   Genome Res 10 (10), 1617-1630 (2000)
   PUBMED   11042159
REFERENCE   8  (residues 1 to 167)
  AUTHORS   Carninci P and Hayashizaki Y.
  TITLE     High-efficiency full-length cDNA cloning
  JOURNAL   Methods Enzymol 303, 19-44 (1999)
   PUBMED   10349636
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC239678.2.
            
            On Oct 4, 2023 this sequence version replaced XP_006517795.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR13862062.160033.1,
                                           SRR13422600.831418.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849383, SAMN00849385
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13"
     Protein         1..167
                     /product="2-cell-stage, variable group, member 3-like"
                     /calculated_mol_wt=18839
     Region          7..154
                     /region_name="DUF1438"
                     /note="Protein of unknown function (DUF1438); pfam07270"
                     /db_xref="CDD:284642"
     CDS             1..167
                     /gene="Tcstv4"
                     /coded_by="NM_001424720.1:813..1316"
                     /db_xref="GeneID:625360"
                     /db_xref="MGI:MGI:4840510"
ORIGIN      
        1 mekakkmmls fpgfvkdtsd teehalpsah alaaqstrcs ksetfclske qshcsedgwv
       61 leweicvfes vdyldsyhkf nctmkkstev fqsecqresq vspgdvennk dkdteepdqp
      121 spsllrekgl evetcdggdc pdkdpasysa rhlgcwawlq rafrqkk
//
LOCUS       NP_001358022             170 aa            linear   ROD 31-OCT-2023
DEFINITION  uncharacterized protein LOC102640804 [Mus musculus].
ACCESSION   NP_001358022
VERSION     NP_001358022.1
DBSOURCE    REFSEQ: accession NM_001371093.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC238940.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13"
     Protein         1..170
                     /product="uncharacterized protein LOC102640804"
                     /calculated_mol_wt=19021
     Region          7..157
                     /region_name="DUF1438"
                     /note="Protein of unknown function (DUF1438); pfam07270"
                     /db_xref="CDD:284642"
     CDS             1..170
                     /gene="Tcstv1b"
                     /gene_synonym="Gm21818"
                     /coded_by="NM_001371093.1:215..727"
                     /db_xref="CCDS:CCDS88539.1"
                     /db_xref="GeneID:102640804"
                     /db_xref="MGI:MGI:5433982"
ORIGIN      
        1 mdkakkmmqs ipsfvkdtsd ieehalpsaq vlpaqstrcs ksetlclgke qshcsedgwi
       61 aewdlysfcv fesvdylrsy hrlnsamkkg tevfqsesqr npqvspgdvk nykdkdteep
      121 dqpspsllre kgldlvtcdg gdcpvqdpvs dssrhlgcwa wlqrafgqkk
//
LOCUS       NP_001297556             171 aa            linear   ROD 31-OCT-2023
DEFINITION  uncharacterized protein LOC236546 [Mus musculus].
ACCESSION   NP_001297556
VERSION     NP_001297556.1
DBSOURCE    REFSEQ: accession NM_001310627.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 171)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC239678.2.
            
            Transcript Variant: This variant (2) uses an alternate splice site
            in the 5' UTR, compared to variant 1. Both variants 1 and 2 encode
            the same protein.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF067061.1, AA545266.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849388 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13"
     Protein         1..171
                     /product="uncharacterized protein LOC236546"
                     /note="2-cell-stage gene family; clone L4 variable group
                     of 2-cell-stage gene family; clone L8 variable group of
                     2-cell-stage gene family"
                     /calculated_mol_wt=19179
     Region          7..157
                     /region_name="DUF1438"
                     /note="Protein of unknown function (DUF1438); pfam07270"
                     /db_xref="CDD:284642"
     CDS             1..171
                     /gene="Tcstv2a"
                     /coded_by="NM_001310627.1:166..681"
                     /db_xref="CCDS:CCDS84071.1"
                     /db_xref="GeneID:236546"
                     /db_xref="MGI:MGI:2681166"
ORIGIN      
        1 mdkakkmmqs ipsfvkdtsd ieehavpsaq vlpaqstrcs ksetlcfske qshcsedgwi
       61 anwdlysfcv fesvdylrsy rrlnsamkkg tevfqsesqr kpqvspgdve sykdkdteep
      121 dqpspsllre kgldlatcdg gdcpdqdpvs dssrhlgcwa wlqrafgqkk k
//
LOCUS       NP_001001449             163 aa            linear   ROD 31-OCT-2023
DEFINITION  uncharacterized protein LOC380878 [Mus musculus].
ACCESSION   NP_001001449 XP_354785
VERSION     NP_001001449.1
DBSOURCE    REFSEQ: accession NM_001001449.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 163)
  AUTHORS   Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, Magen
            A, Canidio E, Pagani M, Peluso I, Lin-Marq N, Koch M, Bilio M,
            Cantiello I, Verde R, De Masi C, Bianchi SA, Cicchini J, Perroud E,
            Mehmeti S, Dagand E, Schrinner S, Nurnberger A, Schmidt K, Metz K,
            Zwingmann C, Brieske N, Springer C, Hernandez AM, Herzog S, Grabbe
            F, Sieverding C, Fischer B, Schrader K, Brockmeyer M, Dettmer S,
            Helbig C, Alunni V, Battaini MA, Mura C, Henrichsen CN,
            Garcia-Lopez R, Echevarria D, Puelles E, Garcia-Calero E, Kruse S,
            Uhr M, Kauck C, Feng G, Milyaev N, Ong CK, Kumar L, Lam M, Semple
            CA, Gyenesei A, Mundlos S, Radelof U, Lehrach H, Sarmientos P,
            Reymond A, Davidson DR, Dolle P, Antonarakis SE, Yaspo ML, Martinez
            S, Baldock RA, Eichele G and Ballabio A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     PREDICTED REFSEQ: This record has not been reviewed and the
            function is unknown. The reference sequence was derived from
            AC231112.2.
            
            On Aug 30, 2004 this sequence version replaced XP_354785.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF067064.1, SRR17253011.2900140.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164132, SAMN02415131
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13"
     Protein         1..163
                     /product="uncharacterized protein LOC380878"
                     /note="uniform group of 2-cell-stage gene family"
                     /calculated_mol_wt=18543
     Region          1..150
                     /region_name="DUF1438"
                     /note="Protein of unknown function (DUF1438); pfam07270"
                     /db_xref="CDD:284642"
     CDS             1..163
                     /gene="Tcstv7a"
                     /coded_by="NM_001001449.3:189..680"
                     /db_xref="CCDS:CCDS56904.1"
                     /db_xref="GeneID:380878"
                     /db_xref="MGI:MGI:2687009"
ORIGIN      
        1 mkrfcpclvq dtshseehal qtsqelpalr prysrsepqc fcgepnhche ddwivdwepy
       61 ylpcvleswd clryhsglnc amkkgtevfq iesqrgpqvf pgdmdndkdt eepdqplpsl
      121 lrekglelet cdggdcpdqd pasdspkhlg cclwlqrafg qkk
//
LOCUS       NP_705743                169 aa            linear   ROD 31-OCT-2023
DEFINITION  2-cell-stage, variable group, member 3 [Mus musculus].
ACCESSION   NP_705743
VERSION     NP_705743.1
DBSOURCE    REFSEQ: accession NM_153523.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 169)
  AUTHORS   Shi F, Xu Y, Zhang S, Fu Z, Yu Q, Zhang S, Sun M, Zhao X and Feng
            X.
  TITLE     Decabromodiphenyl ethane affects embryonic development by
            interfering with nuclear F-actin in zygotes and leads to cognitive
            and social disorders in offspring mice
  JOURNAL   FASEB J 36 (8), e22445 (2022)
   PUBMED   35816173
REFERENCE   2  (residues 1 to 169)
  AUTHORS   Zhang Q, Dan J, Wang H, Guo R, Mao J, Fu H, Wei X and Liu L.
  TITLE     Tcstv1 and Tcstv3 elongate telomeres of mouse ES cells
  JOURNAL   Sci Rep 6, 19852 (2016)
   PUBMED   26816107
  REMARK    GeneRIF: data also suggests that Tcstv1/3 may co-operate and
            stabilize Zscan4 protein but the molecular bases remain to be
            determined.
            Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC225446.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF067060.1, BC125501.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13"
     Protein         1..169
                     /product="2-cell-stage, variable group, member 3"
                     /note="2-cell-stage, variable group, member 1; clone L3"
                     /calculated_mol_wt=19084
     Region          7..157
                     /region_name="DUF1438"
                     /note="Protein of unknown function (DUF1438); pfam07270"
                     /db_xref="CDD:284642"
     CDS             1..169
                     /gene="Tcstv3"
                     /coded_by="NM_153523.3:184..693"
                     /db_xref="CCDS:CCDS56911.1"
                     /db_xref="GeneID:236219"
                     /db_xref="MGI:MGI:2675349"
ORIGIN      
        1 mdkakkmmqs ipsfvkdtsd ieehalpsaq vlpaqstrcs nsetlcfske qshcsedgwi
       61 anwdlysfcv fesvdylksy rrlnsamkkg tevfqsesqr epqvspgdve nykdkdteep
      121 dqpslsllre kglelvtcdg gdcpdqdpas ysarhlgcwa wlqrafrqk
//
LOCUS       NP_001411651             167 aa            linear   ROD 31-OCT-2023
DEFINITION  2-cell-stage, variable group, member 3-like [Mus musculus].
ACCESSION   NP_001411651 XP_011242990
VERSION     NP_001411651.1
DBSOURCE    REFSEQ: accession NM_001424722.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 167)
  AUTHORS   Katayama S, Tomaru Y, Kasukawa T, Waki K, Nakanishi M, Nakamura M,
            Nishida H, Yap CC, Suzuki M, Kawai J, Suzuki H, Carninci P,
            Hayashizaki Y, Wells C, Frith M, Ravasi T, Pang KC, Hallinan J,
            Mattick J, Hume DA, Lipovich L, Batalov S, Engstrom PG, Mizuno Y,
            Faghihi MA, Sandelin A, Chalk AM, Mottagui-Tabar S, Liang Z,
            Lenhard B and Wahlestedt C.
  CONSRTM   RIKEN Genome Exploration Research Group; Genome Science Group
            (Genome Network Project Core Group); FANTOM Consortium
  TITLE     Antisense transcription in the mammalian transcriptome
  JOURNAL   Science 309 (5740), 1564-1566 (2005)
   PUBMED   16141073
REFERENCE   2  (residues 1 to 167)
  AUTHORS   Carninci P, Kasukawa T, Katayama S, Gough J, Frith MC, Maeda N,
            Oyama R, Ravasi T, Lenhard B, Wells C, Kodzius R, Shimokawa K,
            Bajic VB, Brenner SE, Batalov S, Forrest AR, Zavolan M, Davis MJ,
            Wilming LG, Aidinis V, Allen JE, Ambesi-Impiombato A, Apweiler R,
            Aturaliya RN, Bailey TL, Bansal M, Baxter L, Beisel KW, Bersano T,
            Bono H, Chalk AM, Chiu KP, Choudhary V, Christoffels A, Clutterbuck
            DR, Crowe ML, Dalla E, Dalrymple BP, de Bono B, Della Gatta G, di
            Bernardo D, Down T, Engstrom P, Fagiolini M, Faulkner G, Fletcher
            CF, Fukushima T, Furuno M, Futaki S, Gariboldi M, Georgii-Hemming
            P, Gingeras TR, Gojobori T, Green RE, Gustincich S, Harbers M,
            Hayashi Y, Hensch TK, Hirokawa N, Hill D, Huminiecki L, Iacono M,
            Ikeo K, Iwama A, Ishikawa T, Jakt M, Kanapin A, Katoh M, Kawasawa
            Y, Kelso J, Kitamura H, Kitano H, Kollias G, Krishnan SP, Kruger A,
            Kummerfeld SK, Kurochkin IV, Lareau LF, Lazarevic D, Lipovich L,
            Liu J, Liuni S, McWilliam S, Madan Babu M, Madera M, Marchionni L,
            Matsuda H, Matsuzawa S, Miki H, Mignone F, Miyake S, Morris K,
            Mottagui-Tabar S, Mulder N, Nakano N, Nakauchi H, Ng P, Nilsson R,
            Nishiguchi S, Nishikawa S, Nori F, Ohara O, Okazaki Y, Orlando V,
            Pang KC, Pavan WJ, Pavesi G, Pesole G, Petrovsky N, Piazza S, Reed
            J, Reid JF, Ring BZ, Ringwald M, Rost B, Ruan Y, Salzberg SL,
            Sandelin A, Schneider C, Schonbach C, Sekiguchi K, Semple CA, Seno
            S, Sessa L, Sheng Y, Shibata Y, Shimada H, Shimada K, Silva D,
            Sinclair B, Sperling S, Stupka E, Sugiura K, Sultana R, Takenaka Y,
            Taki K, Tammoja K, Tan SL, Tang S, Taylor MS, Tegner J, Teichmann
            SA, Ueda HR, van Nimwegen E, Verardo R, Wei CL, Yagi K, Yamanishi
            H, Zabarovsky E, Zhu S, Zimmer A, Hide W, Bult C, Grimmond SM,
            Teasdale RD, Liu ET, Brusic V, Quackenbush J, Wahlestedt C, Mattick
            JS, Hume DA, Kai C, Sasaki D, Tomaru Y, Fukuda S, Kanamori-Katayama
            M, Suzuki M, Aoki J, Arakawa T, Iida J, Imamura K, Itoh M, Kato T,
            Kawaji H, Kawagashira N, Kawashima T, Kojima M, Kondo S, Konno H,
            Nakano K, Ninomiya N, Nishio T, Okada M, Plessy C, Shibata K,
            Shiraki T, Suzuki S, Tagami M, Waki K, Watahiki A, Okamura-Oho Y,
            Suzuki H, Kawai J and Hayashizaki Y.
  CONSRTM   FANTOM Consortium; RIKEN Genome Exploration Research Group and
            Genome Science Group (Genome Network Project Core Group)
  TITLE     The transcriptional landscape of the mammalian genome
  JOURNAL   Science 309 (5740), 1559-1563 (2005)
   PUBMED   16141072
  REMARK    Erratum:[Science. 2006 Mar 24;311(5768):1713]
REFERENCE   3  (residues 1 to 167)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   4  (residues 1 to 167)
  AUTHORS   Okazaki Y, Furuno M, Kasukawa T, Adachi J, Bono H, Kondo S, Nikaido
            I, Osato N, Saito R, Suzuki H, Yamanaka I, Kiyosawa H, Yagi K,
            Tomaru Y, Hasegawa Y, Nogami A, Schonbach C, Gojobori T, Baldarelli
            R, Hill DP, Bult C, Hume DA, Quackenbush J, Schriml LM, Kanapin A,
            Matsuda H, Batalov S, Beisel KW, Blake JA, Bradt D, Brusic V,
            Chothia C, Corbani LE, Cousins S, Dalla E, Dragani TA, Fletcher CF,
            Forrest A, Frazer KS, Gaasterland T, Gariboldi M, Gissi C, Godzik
            A, Gough J, Grimmond S, Gustincich S, Hirokawa N, Jackson IJ,
            Jarvis ED, Kanai A, Kawaji H, Kawasawa Y, Kedzierski RM, King BL,
            Konagaya A, Kurochkin IV, Lee Y, Lenhard B, Lyons PA, Maglott DR,
            Maltais L, Marchionni L, McKenzie L, Miki H, Nagashima T, Numata K,
            Okido T, Pavan WJ, Pertea G, Pesole G, Petrovsky N, Pillai R,
            Pontius JU, Qi D, Ramachandran S, Ravasi T, Reed JC, Reed DJ, Reid
            J, Ring BZ, Ringwald M, Sandelin A, Schneider C, Semple CA, Setou
            M, Shimada K, Sultana R, Takenaka Y, Taylor MS, Teasdale RD, Tomita
            M, Verardo R, Wagner L, Wahlestedt C, Wang Y, Watanabe Y, Wells C,
            Wilming LG, Wynshaw-Boris A, Yanagisawa M, Yang I, Yang L, Yuan Z,
            Zavolan M, Zhu Y, Zimmer A, Carninci P, Hayatsu N,
            Hirozane-Kishikawa T, Konno H, Nakamura M, Sakazume N, Sato K,
            Shiraki T, Waki K, Kawai J, Aizawa K, Arakawa T, Fukuda S, Hara A,
            Hashizume W, Imotani K, Ishii Y, Itoh M, Kagawa I, Miyazaki A,
            Sakai K, Sasaki D, Shibata K, Shinagawa A, Yasunishi A, Yoshino M,
            Waterston R, Lander ES, Rogers J, Birney E and Hayashizaki Y.
  CONSRTM   FANTOM Consortium; RIKEN Genome Exploration Research Group Phase I
            & II Team
  TITLE     Analysis of the mouse transcriptome based on functional annotation
            of 60,770 full-length cDNAs
  JOURNAL   Nature 420 (6915), 563-573 (2002)
   PUBMED   12466851
REFERENCE   5  (residues 1 to 167)
  AUTHORS   Kawai J, Shinagawa A, Shibata K, Yoshino M, Itoh M, Ishii Y,
            Arakawa T, Hara A, Fukunishi Y, Konno H, Adachi J, Fukuda S, Aizawa
            K, Izawa M, Nishi K, Kiyosawa H, Kondo S, Yamanaka I, Saito T,
            Okazaki Y, Gojobori T, Bono H, Kasukawa T, Saito R, Kadota K,
            Matsuda H, Ashburner M, Batalov S, Casavant T, Fleischmann W,
            Gaasterland T, Gissi C, King B, Kochiwa H, Kuehl P, Lewis S, Matsuo
            Y, Nikaido I, Pesole G, Quackenbush J, Schriml LM, Staubli F,
            Suzuki R, Tomita M, Wagner L, Washio T, Sakai K, Okido T, Furuno M,
            Aono H, Baldarelli R, Barsh G, Blake J, Boffelli D, Bojunga N,
            Carninci P, de Bonaldo MF, Brownstein MJ, Bult C, Fletcher C,
            Fujita M, Gariboldi M, Gustincich S, Hill D, Hofmann M, Hume DA,
            Kamiya M, Lee NH, Lyons P, Marchionni L, Mashima J, Mazzarelli J,
            Mombaerts P, Nordone P, Ring B, Ringwald M, Rodriguez I, Sakamoto
            N, Sasaki H, Sato K, Schonbach C, Seya T, Shibata Y, Storch KF,
            Suzuki H, Toyo-oka K, Wang KH, Weitz C, Whittaker C, Wilming L,
            Wynshaw-Boris A, Yoshida K, Hasegawa Y, Kawaji H, Kohtsuki S and
            Hayashizaki Y.
  CONSRTM   RIKEN Genome Exploration Research Group Phase II Team and the
            FANTOM Consortium
  TITLE     Functional annotation of a full-length mouse cDNA collection
  JOURNAL   Nature 409 (6821), 685-690 (2001)
   PUBMED   11217851
REFERENCE   6  (residues 1 to 167)
  AUTHORS   Shibata K, Itoh M, Aizawa K, Nagaoka S, Sasaki N, Carninci P, Konno
            H, Akiyama J, Nishi K, Kitsunai T, Tashiro H, Itoh M, Sumi N, Ishii
            Y, Nakamura S, Hazama M, Nishine T, Harada A, Yamamoto R, Matsumoto
            H, Sakaguchi S, Ikegami T, Kashiwagi K, Fujiwake S, Inoue K and
            Togawa Y.
  TITLE     RIKEN integrated sequence analysis (RISA) system--384-format
            sequencing pipeline with 384 multicapillary sequencer
  JOURNAL   Genome Res 10 (11), 1757-1771 (2000)
   PUBMED   11076861
REFERENCE   7  (residues 1 to 167)
  AUTHORS   Carninci P, Shibata Y, Hayatsu N, Sugahara Y, Shibata K, Itoh M,
            Konno H, Okazaki Y, Muramatsu M and Hayashizaki Y.
  TITLE     Normalization and subtraction of cap-trapper-selected cDNAs to
            prepare full-length cDNA libraries for rapid discovery of new genes
  JOURNAL   Genome Res 10 (10), 1617-1630 (2000)
   PUBMED   11042159
REFERENCE   8  (residues 1 to 167)
  AUTHORS   Carninci P and Hayashizaki Y.
  TITLE     High-efficiency full-length cDNA cloning
  JOURNAL   Methods Enzymol 303, 19-44 (1999)
   PUBMED   10349636
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC239678.2.
            
            On Oct 5, 2023 this sequence version replaced XP_011242990.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5189679.125943.1,
                                           SRR13861890.230136.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849380
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13"
     Protein         1..167
                     /product="2-cell-stage, variable group, member 3-like"
                     /calculated_mol_wt=18839
     Region          7..154
                     /region_name="DUF1438"
                     /note="Protein of unknown function (DUF1438); pfam07270"
                     /db_xref="CDD:284642"
     CDS             1..167
                     /gene="Tcstv4"
                     /coded_by="NM_001424722.1:1054..1557"
                     /db_xref="GeneID:625360"
                     /db_xref="MGI:MGI:4840510"
ORIGIN      
        1 mekakkmmls fpgfvkdtsd teehalpsah alaaqstrcs ksetfclske qshcsedgwv
       61 leweicvfes vdyldsyhkf nctmkkstev fqsecqresq vspgdvennk dkdteepdqp
      121 spsllrekgl evetcdggdc pdkdpasysa rhlgcwawlq rafrqkk
//
LOCUS       NP_001033014             167 aa            linear   ROD 31-OCT-2023
DEFINITION  2-cell-stage, variable group, member 3-like [Mus musculus].
ACCESSION   NP_001033014 XP_895018 XP_919245
VERSION     NP_001033014.1
DBSOURCE    REFSEQ: accession NM_001037925.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 167)
  AUTHORS   Katayama S, Tomaru Y, Kasukawa T, Waki K, Nakanishi M, Nakamura M,
            Nishida H, Yap CC, Suzuki M, Kawai J, Suzuki H, Carninci P,
            Hayashizaki Y, Wells C, Frith M, Ravasi T, Pang KC, Hallinan J,
            Mattick J, Hume DA, Lipovich L, Batalov S, Engstrom PG, Mizuno Y,
            Faghihi MA, Sandelin A, Chalk AM, Mottagui-Tabar S, Liang Z,
            Lenhard B and Wahlestedt C.
  CONSRTM   RIKEN Genome Exploration Research Group; Genome Science Group
            (Genome Network Project Core Group); FANTOM Consortium
  TITLE     Antisense transcription in the mammalian transcriptome
  JOURNAL   Science 309 (5740), 1564-1566 (2005)
   PUBMED   16141073
REFERENCE   2  (residues 1 to 167)
  AUTHORS   Carninci P, Kasukawa T, Katayama S, Gough J, Frith MC, Maeda N,
            Oyama R, Ravasi T, Lenhard B, Wells C, Kodzius R, Shimokawa K,
            Bajic VB, Brenner SE, Batalov S, Forrest AR, Zavolan M, Davis MJ,
            Wilming LG, Aidinis V, Allen JE, Ambesi-Impiombato A, Apweiler R,
            Aturaliya RN, Bailey TL, Bansal M, Baxter L, Beisel KW, Bersano T,
            Bono H, Chalk AM, Chiu KP, Choudhary V, Christoffels A, Clutterbuck
            DR, Crowe ML, Dalla E, Dalrymple BP, de Bono B, Della Gatta G, di
            Bernardo D, Down T, Engstrom P, Fagiolini M, Faulkner G, Fletcher
            CF, Fukushima T, Furuno M, Futaki S, Gariboldi M, Georgii-Hemming
            P, Gingeras TR, Gojobori T, Green RE, Gustincich S, Harbers M,
            Hayashi Y, Hensch TK, Hirokawa N, Hill D, Huminiecki L, Iacono M,
            Ikeo K, Iwama A, Ishikawa T, Jakt M, Kanapin A, Katoh M, Kawasawa
            Y, Kelso J, Kitamura H, Kitano H, Kollias G, Krishnan SP, Kruger A,
            Kummerfeld SK, Kurochkin IV, Lareau LF, Lazarevic D, Lipovich L,
            Liu J, Liuni S, McWilliam S, Madan Babu M, Madera M, Marchionni L,
            Matsuda H, Matsuzawa S, Miki H, Mignone F, Miyake S, Morris K,
            Mottagui-Tabar S, Mulder N, Nakano N, Nakauchi H, Ng P, Nilsson R,
            Nishiguchi S, Nishikawa S, Nori F, Ohara O, Okazaki Y, Orlando V,
            Pang KC, Pavan WJ, Pavesi G, Pesole G, Petrovsky N, Piazza S, Reed
            J, Reid JF, Ring BZ, Ringwald M, Rost B, Ruan Y, Salzberg SL,
            Sandelin A, Schneider C, Schonbach C, Sekiguchi K, Semple CA, Seno
            S, Sessa L, Sheng Y, Shibata Y, Shimada H, Shimada K, Silva D,
            Sinclair B, Sperling S, Stupka E, Sugiura K, Sultana R, Takenaka Y,
            Taki K, Tammoja K, Tan SL, Tang S, Taylor MS, Tegner J, Teichmann
            SA, Ueda HR, van Nimwegen E, Verardo R, Wei CL, Yagi K, Yamanishi
            H, Zabarovsky E, Zhu S, Zimmer A, Hide W, Bult C, Grimmond SM,
            Teasdale RD, Liu ET, Brusic V, Quackenbush J, Wahlestedt C, Mattick
            JS, Hume DA, Kai C, Sasaki D, Tomaru Y, Fukuda S, Kanamori-Katayama
            M, Suzuki M, Aoki J, Arakawa T, Iida J, Imamura K, Itoh M, Kato T,
            Kawaji H, Kawagashira N, Kawashima T, Kojima M, Kondo S, Konno H,
            Nakano K, Ninomiya N, Nishio T, Okada M, Plessy C, Shibata K,
            Shiraki T, Suzuki S, Tagami M, Waki K, Watahiki A, Okamura-Oho Y,
            Suzuki H, Kawai J and Hayashizaki Y.
  CONSRTM   FANTOM Consortium; RIKEN Genome Exploration Research Group and
            Genome Science Group (Genome Network Project Core Group)
  TITLE     The transcriptional landscape of the mammalian genome
  JOURNAL   Science 309 (5740), 1559-1563 (2005)
   PUBMED   16141072
  REMARK    Erratum:[Science. 2006 Mar 24;311(5768):1713]
REFERENCE   3  (residues 1 to 167)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   4  (residues 1 to 167)
  AUTHORS   Okazaki Y, Furuno M, Kasukawa T, Adachi J, Bono H, Kondo S, Nikaido
            I, Osato N, Saito R, Suzuki H, Yamanaka I, Kiyosawa H, Yagi K,
            Tomaru Y, Hasegawa Y, Nogami A, Schonbach C, Gojobori T, Baldarelli
            R, Hill DP, Bult C, Hume DA, Quackenbush J, Schriml LM, Kanapin A,
            Matsuda H, Batalov S, Beisel KW, Blake JA, Bradt D, Brusic V,
            Chothia C, Corbani LE, Cousins S, Dalla E, Dragani TA, Fletcher CF,
            Forrest A, Frazer KS, Gaasterland T, Gariboldi M, Gissi C, Godzik
            A, Gough J, Grimmond S, Gustincich S, Hirokawa N, Jackson IJ,
            Jarvis ED, Kanai A, Kawaji H, Kawasawa Y, Kedzierski RM, King BL,
            Konagaya A, Kurochkin IV, Lee Y, Lenhard B, Lyons PA, Maglott DR,
            Maltais L, Marchionni L, McKenzie L, Miki H, Nagashima T, Numata K,
            Okido T, Pavan WJ, Pertea G, Pesole G, Petrovsky N, Pillai R,
            Pontius JU, Qi D, Ramachandran S, Ravasi T, Reed JC, Reed DJ, Reid
            J, Ring BZ, Ringwald M, Sandelin A, Schneider C, Semple CA, Setou
            M, Shimada K, Sultana R, Takenaka Y, Taylor MS, Teasdale RD, Tomita
            M, Verardo R, Wagner L, Wahlestedt C, Wang Y, Watanabe Y, Wells C,
            Wilming LG, Wynshaw-Boris A, Yanagisawa M, Yang I, Yang L, Yuan Z,
            Zavolan M, Zhu Y, Zimmer A, Carninci P, Hayatsu N,
            Hirozane-Kishikawa T, Konno H, Nakamura M, Sakazume N, Sato K,
            Shiraki T, Waki K, Kawai J, Aizawa K, Arakawa T, Fukuda S, Hara A,
            Hashizume W, Imotani K, Ishii Y, Itoh M, Kagawa I, Miyazaki A,
            Sakai K, Sasaki D, Shibata K, Shinagawa A, Yasunishi A, Yoshino M,
            Waterston R, Lander ES, Rogers J, Birney E and Hayashizaki Y.
  CONSRTM   FANTOM Consortium; RIKEN Genome Exploration Research Group Phase I
            & II Team
  TITLE     Analysis of the mouse transcriptome based on functional annotation
            of 60,770 full-length cDNAs
  JOURNAL   Nature 420 (6915), 563-573 (2002)
   PUBMED   12466851
REFERENCE   5  (residues 1 to 167)
  AUTHORS   Kawai J, Shinagawa A, Shibata K, Yoshino M, Itoh M, Ishii Y,
            Arakawa T, Hara A, Fukunishi Y, Konno H, Adachi J, Fukuda S, Aizawa
            K, Izawa M, Nishi K, Kiyosawa H, Kondo S, Yamanaka I, Saito T,
            Okazaki Y, Gojobori T, Bono H, Kasukawa T, Saito R, Kadota K,
            Matsuda H, Ashburner M, Batalov S, Casavant T, Fleischmann W,
            Gaasterland T, Gissi C, King B, Kochiwa H, Kuehl P, Lewis S, Matsuo
            Y, Nikaido I, Pesole G, Quackenbush J, Schriml LM, Staubli F,
            Suzuki R, Tomita M, Wagner L, Washio T, Sakai K, Okido T, Furuno M,
            Aono H, Baldarelli R, Barsh G, Blake J, Boffelli D, Bojunga N,
            Carninci P, de Bonaldo MF, Brownstein MJ, Bult C, Fletcher C,
            Fujita M, Gariboldi M, Gustincich S, Hill D, Hofmann M, Hume DA,
            Kamiya M, Lee NH, Lyons P, Marchionni L, Mashima J, Mazzarelli J,
            Mombaerts P, Nordone P, Ring B, Ringwald M, Rodriguez I, Sakamoto
            N, Sasaki H, Sato K, Schonbach C, Seya T, Shibata Y, Storch KF,
            Suzuki H, Toyo-oka K, Wang KH, Weitz C, Whittaker C, Wilming L,
            Wynshaw-Boris A, Yoshida K, Hasegawa Y, Kawaji H, Kohtsuki S and
            Hayashizaki Y.
  CONSRTM   RIKEN Genome Exploration Research Group Phase II Team and the
            FANTOM Consortium
  TITLE     Functional annotation of a full-length mouse cDNA collection
  JOURNAL   Nature 409 (6821), 685-690 (2001)
   PUBMED   11217851
REFERENCE   6  (residues 1 to 167)
  AUTHORS   Shibata K, Itoh M, Aizawa K, Nagaoka S, Sasaki N, Carninci P, Konno
            H, Akiyama J, Nishi K, Kitsunai T, Tashiro H, Itoh M, Sumi N, Ishii
            Y, Nakamura S, Hazama M, Nishine T, Harada A, Yamamoto R, Matsumoto
            H, Sakaguchi S, Ikegami T, Kashiwagi K, Fujiwake S, Inoue K and
            Togawa Y.
  TITLE     RIKEN integrated sequence analysis (RISA) system--384-format
            sequencing pipeline with 384 multicapillary sequencer
  JOURNAL   Genome Res 10 (11), 1757-1771 (2000)
   PUBMED   11076861
REFERENCE   7  (residues 1 to 167)
  AUTHORS   Carninci P, Shibata Y, Hayatsu N, Sugahara Y, Shibata K, Itoh M,
            Konno H, Okazaki Y, Muramatsu M and Hayashizaki Y.
  TITLE     Normalization and subtraction of cap-trapper-selected cDNAs to
            prepare full-length cDNA libraries for rapid discovery of new genes
  JOURNAL   Genome Res 10 (10), 1617-1630 (2000)
   PUBMED   11042159
REFERENCE   8  (residues 1 to 167)
  AUTHORS   Carninci P and Hayashizaki Y.
  TITLE     High-efficiency full-length cDNA cloning
  JOURNAL   Methods Enzymol 303, 19-44 (1999)
   PUBMED   10349636
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC239678.2.
            
            On or before Jan 26, 2006 this sequence version replaced
            XP_895018.1, XP_919245.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK132621.1, SRR13861890.169657.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849377
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13"
     Protein         1..167
                     /product="2-cell-stage, variable group, member 3-like"
                     /calculated_mol_wt=18839
     Region          7..154
                     /region_name="DUF1438"
                     /note="Protein of unknown function (DUF1438); pfam07270"
                     /db_xref="CDD:284642"
     CDS             1..167
                     /gene="Tcstv4"
                     /coded_by="NM_001037925.3:1057..1560"
                     /db_xref="CCDS:CCDS56910.1"
                     /db_xref="GeneID:625360"
                     /db_xref="MGI:MGI:4840510"
ORIGIN      
        1 mekakkmmls fpgfvkdtsd teehalpsah alaaqstrcs ksetfclske qshcsedgwv
       61 leweicvfes vdyldsyhkf nctmkkstev fqsecqresq vspgdvennk dkdteepdqp
      121 spsllrekgl evetcdggdc pdkdpasysa rhlgcwawlq rafrqkk
//
LOCUS       NP_001411650             167 aa            linear   ROD 31-OCT-2023
DEFINITION  2-cell-stage, variable group, member 3-like [Mus musculus].
ACCESSION   NP_001411650 XP_011242989
VERSION     NP_001411650.1
DBSOURCE    REFSEQ: accession NM_001424721.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 167)
  AUTHORS   Katayama S, Tomaru Y, Kasukawa T, Waki K, Nakanishi M, Nakamura M,
            Nishida H, Yap CC, Suzuki M, Kawai J, Suzuki H, Carninci P,
            Hayashizaki Y, Wells C, Frith M, Ravasi T, Pang KC, Hallinan J,
            Mattick J, Hume DA, Lipovich L, Batalov S, Engstrom PG, Mizuno Y,
            Faghihi MA, Sandelin A, Chalk AM, Mottagui-Tabar S, Liang Z,
            Lenhard B and Wahlestedt C.
  CONSRTM   RIKEN Genome Exploration Research Group; Genome Science Group
            (Genome Network Project Core Group); FANTOM Consortium
  TITLE     Antisense transcription in the mammalian transcriptome
  JOURNAL   Science 309 (5740), 1564-1566 (2005)
   PUBMED   16141073
REFERENCE   2  (residues 1 to 167)
  AUTHORS   Carninci P, Kasukawa T, Katayama S, Gough J, Frith MC, Maeda N,
            Oyama R, Ravasi T, Lenhard B, Wells C, Kodzius R, Shimokawa K,
            Bajic VB, Brenner SE, Batalov S, Forrest AR, Zavolan M, Davis MJ,
            Wilming LG, Aidinis V, Allen JE, Ambesi-Impiombato A, Apweiler R,
            Aturaliya RN, Bailey TL, Bansal M, Baxter L, Beisel KW, Bersano T,
            Bono H, Chalk AM, Chiu KP, Choudhary V, Christoffels A, Clutterbuck
            DR, Crowe ML, Dalla E, Dalrymple BP, de Bono B, Della Gatta G, di
            Bernardo D, Down T, Engstrom P, Fagiolini M, Faulkner G, Fletcher
            CF, Fukushima T, Furuno M, Futaki S, Gariboldi M, Georgii-Hemming
            P, Gingeras TR, Gojobori T, Green RE, Gustincich S, Harbers M,
            Hayashi Y, Hensch TK, Hirokawa N, Hill D, Huminiecki L, Iacono M,
            Ikeo K, Iwama A, Ishikawa T, Jakt M, Kanapin A, Katoh M, Kawasawa
            Y, Kelso J, Kitamura H, Kitano H, Kollias G, Krishnan SP, Kruger A,
            Kummerfeld SK, Kurochkin IV, Lareau LF, Lazarevic D, Lipovich L,
            Liu J, Liuni S, McWilliam S, Madan Babu M, Madera M, Marchionni L,
            Matsuda H, Matsuzawa S, Miki H, Mignone F, Miyake S, Morris K,
            Mottagui-Tabar S, Mulder N, Nakano N, Nakauchi H, Ng P, Nilsson R,
            Nishiguchi S, Nishikawa S, Nori F, Ohara O, Okazaki Y, Orlando V,
            Pang KC, Pavan WJ, Pavesi G, Pesole G, Petrovsky N, Piazza S, Reed
            J, Reid JF, Ring BZ, Ringwald M, Rost B, Ruan Y, Salzberg SL,
            Sandelin A, Schneider C, Schonbach C, Sekiguchi K, Semple CA, Seno
            S, Sessa L, Sheng Y, Shibata Y, Shimada H, Shimada K, Silva D,
            Sinclair B, Sperling S, Stupka E, Sugiura K, Sultana R, Takenaka Y,
            Taki K, Tammoja K, Tan SL, Tang S, Taylor MS, Tegner J, Teichmann
            SA, Ueda HR, van Nimwegen E, Verardo R, Wei CL, Yagi K, Yamanishi
            H, Zabarovsky E, Zhu S, Zimmer A, Hide W, Bult C, Grimmond SM,
            Teasdale RD, Liu ET, Brusic V, Quackenbush J, Wahlestedt C, Mattick
            JS, Hume DA, Kai C, Sasaki D, Tomaru Y, Fukuda S, Kanamori-Katayama
            M, Suzuki M, Aoki J, Arakawa T, Iida J, Imamura K, Itoh M, Kato T,
            Kawaji H, Kawagashira N, Kawashima T, Kojima M, Kondo S, Konno H,
            Nakano K, Ninomiya N, Nishio T, Okada M, Plessy C, Shibata K,
            Shiraki T, Suzuki S, Tagami M, Waki K, Watahiki A, Okamura-Oho Y,
            Suzuki H, Kawai J and Hayashizaki Y.
  CONSRTM   FANTOM Consortium; RIKEN Genome Exploration Research Group and
            Genome Science Group (Genome Network Project Core Group)
  TITLE     The transcriptional landscape of the mammalian genome
  JOURNAL   Science 309 (5740), 1559-1563 (2005)
   PUBMED   16141072
  REMARK    Erratum:[Science. 2006 Mar 24;311(5768):1713]
REFERENCE   3  (residues 1 to 167)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   4  (residues 1 to 167)
  AUTHORS   Okazaki Y, Furuno M, Kasukawa T, Adachi J, Bono H, Kondo S, Nikaido
            I, Osato N, Saito R, Suzuki H, Yamanaka I, Kiyosawa H, Yagi K,
            Tomaru Y, Hasegawa Y, Nogami A, Schonbach C, Gojobori T, Baldarelli
            R, Hill DP, Bult C, Hume DA, Quackenbush J, Schriml LM, Kanapin A,
            Matsuda H, Batalov S, Beisel KW, Blake JA, Bradt D, Brusic V,
            Chothia C, Corbani LE, Cousins S, Dalla E, Dragani TA, Fletcher CF,
            Forrest A, Frazer KS, Gaasterland T, Gariboldi M, Gissi C, Godzik
            A, Gough J, Grimmond S, Gustincich S, Hirokawa N, Jackson IJ,
            Jarvis ED, Kanai A, Kawaji H, Kawasawa Y, Kedzierski RM, King BL,
            Konagaya A, Kurochkin IV, Lee Y, Lenhard B, Lyons PA, Maglott DR,
            Maltais L, Marchionni L, McKenzie L, Miki H, Nagashima T, Numata K,
            Okido T, Pavan WJ, Pertea G, Pesole G, Petrovsky N, Pillai R,
            Pontius JU, Qi D, Ramachandran S, Ravasi T, Reed JC, Reed DJ, Reid
            J, Ring BZ, Ringwald M, Sandelin A, Schneider C, Semple CA, Setou
            M, Shimada K, Sultana R, Takenaka Y, Taylor MS, Teasdale RD, Tomita
            M, Verardo R, Wagner L, Wahlestedt C, Wang Y, Watanabe Y, Wells C,
            Wilming LG, Wynshaw-Boris A, Yanagisawa M, Yang I, Yang L, Yuan Z,
            Zavolan M, Zhu Y, Zimmer A, Carninci P, Hayatsu N,
            Hirozane-Kishikawa T, Konno H, Nakamura M, Sakazume N, Sato K,
            Shiraki T, Waki K, Kawai J, Aizawa K, Arakawa T, Fukuda S, Hara A,
            Hashizume W, Imotani K, Ishii Y, Itoh M, Kagawa I, Miyazaki A,
            Sakai K, Sasaki D, Shibata K, Shinagawa A, Yasunishi A, Yoshino M,
            Waterston R, Lander ES, Rogers J, Birney E and Hayashizaki Y.
  CONSRTM   FANTOM Consortium; RIKEN Genome Exploration Research Group Phase I
            & II Team
  TITLE     Analysis of the mouse transcriptome based on functional annotation
            of 60,770 full-length cDNAs
  JOURNAL   Nature 420 (6915), 563-573 (2002)
   PUBMED   12466851
REFERENCE   5  (residues 1 to 167)
  AUTHORS   Kawai J, Shinagawa A, Shibata K, Yoshino M, Itoh M, Ishii Y,
            Arakawa T, Hara A, Fukunishi Y, Konno H, Adachi J, Fukuda S, Aizawa
            K, Izawa M, Nishi K, Kiyosawa H, Kondo S, Yamanaka I, Saito T,
            Okazaki Y, Gojobori T, Bono H, Kasukawa T, Saito R, Kadota K,
            Matsuda H, Ashburner M, Batalov S, Casavant T, Fleischmann W,
            Gaasterland T, Gissi C, King B, Kochiwa H, Kuehl P, Lewis S, Matsuo
            Y, Nikaido I, Pesole G, Quackenbush J, Schriml LM, Staubli F,
            Suzuki R, Tomita M, Wagner L, Washio T, Sakai K, Okido T, Furuno M,
            Aono H, Baldarelli R, Barsh G, Blake J, Boffelli D, Bojunga N,
            Carninci P, de Bonaldo MF, Brownstein MJ, Bult C, Fletcher C,
            Fujita M, Gariboldi M, Gustincich S, Hill D, Hofmann M, Hume DA,
            Kamiya M, Lee NH, Lyons P, Marchionni L, Mashima J, Mazzarelli J,
            Mombaerts P, Nordone P, Ring B, Ringwald M, Rodriguez I, Sakamoto
            N, Sasaki H, Sato K, Schonbach C, Seya T, Shibata Y, Storch KF,
            Suzuki H, Toyo-oka K, Wang KH, Weitz C, Whittaker C, Wilming L,
            Wynshaw-Boris A, Yoshida K, Hasegawa Y, Kawaji H, Kohtsuki S and
            Hayashizaki Y.
  CONSRTM   RIKEN Genome Exploration Research Group Phase II Team and the
            FANTOM Consortium
  TITLE     Functional annotation of a full-length mouse cDNA collection
  JOURNAL   Nature 409 (6821), 685-690 (2001)
   PUBMED   11217851
REFERENCE   6  (residues 1 to 167)
  AUTHORS   Shibata K, Itoh M, Aizawa K, Nagaoka S, Sasaki N, Carninci P, Konno
            H, Akiyama J, Nishi K, Kitsunai T, Tashiro H, Itoh M, Sumi N, Ishii
            Y, Nakamura S, Hazama M, Nishine T, Harada A, Yamamoto R, Matsumoto
            H, Sakaguchi S, Ikegami T, Kashiwagi K, Fujiwake S, Inoue K and
            Togawa Y.
  TITLE     RIKEN integrated sequence analysis (RISA) system--384-format
            sequencing pipeline with 384 multicapillary sequencer
  JOURNAL   Genome Res 10 (11), 1757-1771 (2000)
   PUBMED   11076861
REFERENCE   7  (residues 1 to 167)
  AUTHORS   Carninci P, Shibata Y, Hayatsu N, Sugahara Y, Shibata K, Itoh M,
            Konno H, Okazaki Y, Muramatsu M and Hayashizaki Y.
  TITLE     Normalization and subtraction of cap-trapper-selected cDNAs to
            prepare full-length cDNA libraries for rapid discovery of new genes
  JOURNAL   Genome Res 10 (10), 1617-1630 (2000)
   PUBMED   11042159
REFERENCE   8  (residues 1 to 167)
  AUTHORS   Carninci P and Hayashizaki Y.
  TITLE     High-efficiency full-length cDNA cloning
  JOURNAL   Methods Enzymol 303, 19-44 (1999)
   PUBMED   10349636
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC239678.2.
            
            On Oct 4, 2023 this sequence version replaced XP_011242989.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR13861889.15650.1,
                                           SRR13422586.442459.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849383, SAMN00849388
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13"
     Protein         1..167
                     /product="2-cell-stage, variable group, member 3-like"
                     /calculated_mol_wt=18839
     Region          7..154
                     /region_name="DUF1438"
                     /note="Protein of unknown function (DUF1438); pfam07270"
                     /db_xref="CDD:284642"
     CDS             1..167
                     /gene="Tcstv4"
                     /coded_by="NM_001424721.1:1053..1556"
                     /db_xref="GeneID:625360"
                     /db_xref="MGI:MGI:4840510"
ORIGIN      
        1 mekakkmmls fpgfvkdtsd teehalpsah alaaqstrcs ksetfclske qshcsedgwv
       61 leweicvfes vdyldsyhkf nctmkkstev fqsecqresq vspgdvennk dkdteepdqp
      121 spsllrekgl evetcdggdc pdkdpasysa rhlgcwawlq rafrqkk
//
LOCUS       NP_001034737             169 aa            linear   ROD 31-OCT-2023
DEFINITION  2-cell-stage, variable group, member 1-like [Mus musculus].
ACCESSION   NP_001034737 XP_921631
VERSION     NP_001034737.2
DBSOURCE    REFSEQ: accession NM_001039648.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 169)
  AUTHORS   Zhang W, Walker E, Tamplin OJ, Rossant J, Stanford WL and Hughes
            TR.
  TITLE     Zfp206 regulates ES cell gene expression and differentiation
  JOURNAL   Nucleic Acids Res 34 (17), 4780-4790 (2006)
   PUBMED   16971461
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK139926.1 and BC147578.1.
            
            On Jul 3, 2012 this sequence version replaced NP_001034737.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK139926.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13"
     Protein         1..169
                     /product="2-cell-stage, variable group, member 1-like"
                     /calculated_mol_wt=19054
     Region          7..155
                     /region_name="DUF1438"
                     /note="Protein of unknown function (DUF1438); pfam07270"
                     /db_xref="CDD:284642"
     CDS             1..169
                     /gene="Tcstv2c"
                     /gene_synonym="Gm20767"
                     /coded_by="NM_001039648.3:719..1228"
                     /db_xref="CCDS:CCDS56908.1"
                     /db_xref="GeneID:639910"
                     /db_xref="MGI:MGI:5434123"
ORIGIN      
        1 mdkakkmmqs fsgfvkdtsd teehalpnaq vlpalstrcs ksetlcfske qshcsedgwi
       61 aewdlysfcv fesvdylrsy hrlnsamkkg tevfqsesqr kpqvspgdve nykdteepdq
      121 pfpsllrekg ldlatcdggd cpdqdpvsdn srhlgcwawl qrafgqkkk
//
LOCUS       NP_951015                171 aa            linear   ROD 31-OCT-2023
DEFINITION  uncharacterized protein LOC236546 [Mus musculus].
ACCESSION   NP_951015 XP_135720
VERSION     NP_951015.1
DBSOURCE    REFSEQ: accession NM_199060.2
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 171)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC239678.2.
            
            On Jan 1, 2004 this sequence version replaced XP_135720.1.
            
            Transcript Variant: This variant (1) represents the longer
            transcript. Both variants 1 and 2 encode the same protein.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF067062.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849388 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13"
     Protein         1..171
                     /product="uncharacterized protein LOC236546"
                     /note="2-cell-stage gene family; clone L4 variable group
                     of 2-cell-stage gene family; clone L8 variable group of
                     2-cell-stage gene family"
                     /calculated_mol_wt=19179
     Region          7..157
                     /region_name="DUF1438"
                     /note="Protein of unknown function (DUF1438); pfam07270"
                     /db_xref="CDD:284642"
     CDS             1..171
                     /gene="Tcstv2a"
                     /coded_by="NM_199060.2:185..700"
                     /db_xref="CCDS:CCDS84071.1"
                     /db_xref="GeneID:236546"
                     /db_xref="MGI:MGI:2681166"
ORIGIN      
        1 mdkakkmmqs ipsfvkdtsd ieehavpsaq vlpaqstrcs ksetlcfske qshcsedgwi
       61 anwdlysfcv fesvdylrsy rrlnsamkkg tevfqsesqr kpqvspgdve sykdkdteep
      121 dqpspsllre kgldlatcdg gdcpdqdpvs dssrhlgcwa wlqrafgqkk k
//
LOCUS       NP_766424               2094 aa            linear   ROD 31-OCT-2023
DEFINITION  uncharacterized protein KIAA2026 homolog [Mus musculus].
ACCESSION   NP_766424
VERSION     NP_766424.2
DBSOURCE    REFSEQ: accession NM_172836.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 2094)
  AUTHORS   Stryke D, Kawamoto M, Huang CC, Johns SJ, King LA, Harper CA, Meng
            EC, Lee RE, Yee A, L'Italien L, Chuang PT, Young SG, Skarnes WC,
            Babbitt PC and Ferrin TE.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   2  (residues 1 to 2094)
  AUTHORS   Piao Y, Ko NT, Lim MK and Ko MS.
  TITLE     Construction of long-transcript enriched cDNA libraries from
            submicrogram amounts of total RNAs by a universal PCR amplification
            method
  JOURNAL   Genome Res 11 (9), 1553-1558 (2001)
   PUBMED   11544199
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC120159.9.
            
            On Apr 27, 2010 this sequence version replaced NP_766424.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: ERR3363657.118744.1 [ECO:0000332]
            RNAseq introns              :: partial sample support SAMN01164139,
                                           SAMN01164141 [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2094
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="19"
                     /map="19 24.3 cM"
     Protein         1..2094
                     /product="uncharacterized protein KIAA2026 homolog"
                     /note="bromo domain"
                     /calculated_mol_wt=226395
     Region          <137..193
                     /region_name="Bromodomain"
                     /note="Bromodomains are found in many chromatin-associated
                     proteins and in nuclear histone acetyltransferases. They
                     interact specifically with acetylated lysine; cd04369"
                     /db_xref="CDD:99922"
     Region          <253..>292
                     /region_name="MAP7"
                     /note="MAP7 (E-MAP-115) family; pfam05672"
                     /db_xref="CDD:461709"
     Region          <770..>968
                     /region_name="PRK03918"
                     /note="DNA double-strand break repair ATPase Rad50"
                     /db_xref="CDD:235175"
     Region          <1120..>1375
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          <1641..1997
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     CDS             1..2094
                     /gene="Brd10"
                     /gene_synonym="9930021J03Rik; Gm9832; mKIAA2026"
                     /coded_by="NM_172836.4:517..6801"
                     /db_xref="GeneID:240613"
                     /db_xref="MGI:MGI:2444398"
ORIGIN      
        1 msvpeppgem eraaeeerpp pptgegneee vvvaaaaras glvrrrsass vdeeeeaaas
       61 ettvvagggc keqeltyelq qgyrilgefl qekhrgltap flqplggvaa geeevaegrr
      121 sggrgsrvpp qqpsqgmcll kmeekfssgq yrgitefvad frlmletcyr lhgvdhwisk
      181 qgqklemlle qklallsrhl rekttiavts rgyygleeek gtacpstrrr stprslaglt
      241 sgvfesimvq vlrqeeqlra keekrlreqe rkeaeeacqk eveewerkll aqaapacmen
      301 mweipaighf lclaqqilnl peivfyeler cllmpqcnaf lskimtslls pphrrptlhr
      361 rptlpyrtwe avlrqkvqqw ytavgqtenp dncaeklglc pqffkvlgev npleerpfhe
      421 lpfyqkvwll kglcdfvyet qkevqdavlg qpihecrevi lgydylenay vhfpqfcgad
      481 vriykqrpfq apefpvppik vkrvprikle kfkcdyants ngehrctkeg lplafkkeqe
      541 idfdpaccpt kmnfdnhdit lemevksncd ikvhrpceie ktdcckenlq kprspgevtg
      601 fgeplspgei rfienqekyg easkiktesn plkenalksc qihingshid hpdinchkvv
      661 rdillehslq shkklkltkm rakkkkkkkk klkdvlnenl qrkreglhsl pfksykpeiq
      721 nklliikkkg khkkhksgkk siskkaitkk rktvtkspav pefqlictnl delrelitki
      781 enelkdlens rkksgkwyhr rqavkelhst lirllnellp wepklmkafq rnrsrlkkdy
      841 ddfrrqpdhg qftrelwatd ecegnperea pkaevsksvd aaepldtlek eqegsddmkl
      901 seigfpmars kllkkelpsk divktlpktl krqskqssyl ddstkelspr kkaklstnet
      961 svenlevnmq ieclkeskpp elptpesfas kasvpvstlq kgtkpiqall aknignkvtl
     1021 tnqlppstgr svpavekpal spedtsplkp altcltstkg plqmvykmpc gqwlpvdlhs
     1081 ssvkiqmqpm vdsktgekim qqvlilpknf viqhkegkav ekeiaapqqk gpehcspgpq
     1141 tsascslvsv pvtsvstqlp ntvlsktstp ssnvsarsqp lspvasvsna ltspvktsqs
     1201 eagkvkstas sttlpqphts ptisstvqpl lpattlnest dpgssipcfs qqtvdsseak
     1261 qelktvcird sqsilvrtrg gntgvvkvqt npeqnspnsl ssssvftftp qfqaflvpks
     1321 tscsassqva gvtttsslps fsqastsvsi scgfhppmgk nlkstqgqtl ssgyvgpmie
     1381 ktsympsspl kpsvssssll psttnssvsv isistgnfgq tntnvihtst kpqqvdcitk
     1441 sypvtrseat tavngdvlge tpgqklmlvs apsglpsgsv psvntapept sagvstqkvv
     1501 finapvpgga sssaivaesl rqslpsplnk tyiknpeqpq ivlipstvga pikinssptv
     1561 sqikdvkigl nigqaiinpp gnlpamssin ilqsvmpkge dksskscisp ispnsnsapa
     1621 ssnivnhslp aasesartan tfsgigasvp lsslsvassp asagtrppvl vsgndtssri
     1681 mpvlsnrlcp snlgntvais tvktghlass vlisttqptv spkcltpalq ipvtvalptp
     1741 vttspkiint vpqsatipga trpvslskrq sqtslqfqsp gtttivptna ntnkppaels
     1801 psaspgkivn isnvtsmpnq hmspslvkst lgnnsiaggs aihtcsppsn itslagapfs
     1861 epciqqkivi ntstplapgt qimmngarfi vppqglgags hvllistnpk ygpplvlnsg
     1921 qsilatpvdn pvqkiiqtsn sslsgqplkp svrnspktvn slgspsslsa vhtpphiint
     1981 pakvcvppap paaltsviks spatllakts lvsaisssnp plpsstsvlh ldtsvkkllv
     2041 spegailnti ntaaakvssl psplppvvsa sqnpasvfpa fpssalekpd taas
//
LOCUS       NP_001107978             280 aa            linear   MAM 31-OCT-2023
DEFINITION  tumor necrosis factor ligand superfamily member 13B [Bos taurus].
ACCESSION   NP_001107978 NP_001306820 XP_010809291 XP_869635
VERSION     NP_001107978.1
DBSOURCE    REFSEQ: accession NM_001114506.2
KEYWORDS    RefSeq.
SOURCE      Bos taurus (domestic cattle)
  ORGANISM  Bos taurus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Bovidae; Bovinae; Bos.
REFERENCE   1  (residues 1 to 280)
  AUTHORS   Premzl M.
  TITLE     Comparative genomic analysis of eutherian tumor necrosis factor
            ligand genes
  JOURNAL   Immunogenetics 68 (2), 125-132 (2016)
   PUBMED   26646413
REFERENCE   2  (residues 1 to 280)
  AUTHORS   Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D,
            Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Marcais G,
            Roberts M, Subramanian P, Yorke JA and Salzberg SL.
  TITLE     A whole-genome assembly of the domestic cow, Bos taurus
  JOURNAL   Genome Biol 10 (4), R42 (2009)
   PUBMED   19393038
REFERENCE   3  (residues 1 to 280)
  AUTHORS   Guan ZB, Shui Y, Zhang JX and Zhang SQ.
  TITLE     Molecular cloning, genomic organization and expression analysis of
            the gene encoding bovine (Bos taurus) B-cell activating factor
            belonging to the TNF family (BAFF)
  JOURNAL   Gene 425 (1-2), 17-22 (2008)
   PUBMED   18786621
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            NKLS02000012.1.
            
            On or before Oct 31, 2023 this sequence version replaced
            NP_001306820.1, XP_010809291.1, XP_869635.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: EU213012.1, GGVE01024918.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA6648759, SAMEA6648760
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Bos taurus"
                     /db_xref="taxon:9913"
                     /chromosome="12"
                     /map="12"
                     /breed="Hereford"
     Protein         1..280
                     /product="tumor necrosis factor ligand superfamily member
                     13B"
                     /note="B-lymphocyte stimulator; B-cell activating factor;
                     tumor necrosis factor (ligand) superfamily, member 13b;
                     tumor necrosis factor ligand 7A"
                     /calculated_mol_wt=30325
     Region          141..277
                     /region_name="TNF"
                     /note="Tumor Necrosis Factor; TNF superfamily members
                     include the cytokines: TNF (TNF-alpha), LT
                     (lymphotoxin-alpha, TNF-beta), CD40 ligand, Apo2L (TRAIL),
                     Fas ligand, and osteoprotegerin (OPG) ligand. These
                     proteins generally have an intracellular N-terminal...;
                     cd00184"
                     /db_xref="CDD:238108"
     Site            order(143,189,191,241,246,273,277)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:238108"
     Site            order(164,166,204,211,220)
                     /site_type="active"
                     /note="receptor binding sites [active]"
                     /db_xref="CDD:238108"
     CDS             1..280
                     /gene="TNFSF13B"
                     /gene_synonym="TNLG7A"
                     /coded_by="NM_001114506.2:204..1046"
                     /db_xref="GeneID:504507"
                     /db_xref="VGNC:VGNC:107257"
ORIGIN      
        1 mddstgeqsr lscpqtreem klkeggsvlp qeespsgrcs kdgkllavtl llaasssclt
       61 vlafcwvasl qaelgslrae lrgrpgapqa gaaapreapg vtpalkqrif appapgesns
      121 sqsgrskral qeaeetvtqd clqliadsdt ptirkgaytf vpwllsfkrg raleekenki
      181 lvketgyffi ygqvlytdnt famghliqrk kvhvfgdels lvtlfrciqn mpetlpnnsc
      241 ysagiaklee gdelqlaipr edakisrdgd gtffgalkll
//
LOCUS       NP_001297561             171 aa            linear   ROD 31-OCT-2023
DEFINITION  2-cell-stage, variable group-like [Mus musculus].
ACCESSION   NP_001297561 XP_011242959
VERSION     NP_001297561.1
DBSOURCE    REFSEQ: accession NM_001310632.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC231112.2.
            
            On Jul 16, 2015 this sequence version replaced XP_011242959.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            CCDS Note: This Tcstv-like gene copy lacks best hit transcript
            support, and thus this CCDS representation is inferred based on
            paralogous transcript alignments and RNA-seq data.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN01164135
                              [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on single protein-coding
                                         transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13"
     Protein         1..171
                     /product="2-cell-stage, variable group-like"
                     /calculated_mol_wt=19337
     Region          7..157
                     /region_name="DUF1438"
                     /note="Protein of unknown function (DUF1438); pfam07270"
                     /db_xref="CDD:284642"
     CDS             1..171
                     /gene="Tcstv2b"
                     /gene_synonym="Gm21761"
                     /coded_by="NM_001310632.1:168..683"
                     /db_xref="CCDS:CCDS79246.1"
                     /db_xref="GeneID:106029237"
                     /db_xref="MGI:MGI:5433925"
ORIGIN      
        1 mdkakkmmqs ipsfvkdtsd ieehalptaq vlpaqstrcs ksetlcfske qshcsedgwi
       61 aewdlysfcv fesvdylrsy rrlnsamkkg tevfqsesqr kpqvspgdve nykdkdteep
      121 dqpfpsllre kgldlatcdg gdcpdqdpvs dnsrhlgcwa wlqrafgqkk k
//
LOCUS       NP_149066                596 aa            linear   ROD 31-OCT-2023
DEFINITION  MLV-related proviral Env polyprotein-like [Mus musculus].
ACCESSION   NP_149066
VERSION     NP_149066.2
DBSOURCE    REFSEQ: accession NM_033075.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 596)
  AUTHORS   Bedogni F and Hevner RF.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 596)
  AUTHORS   Rutledge EA and McMahon AP.
  TITLE     Mutational analysis of genes with ureteric progenitor cell-specific
            expression in branching morphogenesis of the mouse kidney
  JOURNAL   Dev Dyn 249 (6), 765-774 (2020)
   PUBMED   32017326
REFERENCE   3  (residues 1 to 596)
  AUTHORS   Rutledge EA, Benazet JD and McMahon AP.
  TITLE     Cellular heterogeneity in the ureteric progenitor niche and
            distinct profiles of branching morphogenesis in organ development
  JOURNAL   Development 144 (17), 3177-3188 (2017)
   PUBMED   28705898
REFERENCE   4  (residues 1 to 596)
  AUTHORS   Wiese CB, Ireland S, Fleming NL, Yu J, Valerius MT, Georgas K, Chiu
            HS, Brennan J, Armstrong J, Little MH, McMahon AP and
            Southard-Smith EM.
  TITLE     A genome-wide screen to identify transcription factors expressed in
            pelvic Ganglia of the lower urinary tract
  JOURNAL   Front Neurosci 6, 130 (2012)
   PUBMED   22988430
  REMARK    Publication Status: Online-Only
REFERENCE   5  (residues 1 to 596)
  AUTHORS   van Kooij M, de Groot K, van Vugt H, Aten J and Snoek M.
  TITLE     Genotype versus phenotype: conflicting results in mapping a lung
            tumor susceptibility locus to the G7c recombination interval in the
            mouse MHC class III region
  JOURNAL   Immunogenetics 53 (8), 656-661 (2001)
   PUBMED   11797099
REFERENCE   6  (residues 1 to 596)
  AUTHORS   Snoek M and van Vugt H.
  TITLE     The sequence and organization of the mouse valyl-tRNA synthetase
            gene G7a/Bat6 located in the MHC class III region
  JOURNAL   Immunogenetics 49 (5), 468-470 (1999)
   PUBMED   10199925
REFERENCE   7  (residues 1 to 596)
  AUTHORS   Snoek M, Teuscher C and van Vugt H.
  TITLE     Molecular analysis of the major MHC recombinational hot spot
            located within the G7c gene of the murine class III region that is
            involved in disease susceptibility
  JOURNAL   J Immunol 160 (1), 266-272 (1998)
   PUBMED   9551980
REFERENCE   8  (residues 1 to 596)
  AUTHORS   Bedian V, Adams T, Geiger EA, Bailey LC and Gasser DL.
  TITLE     A gene belonging to the Sm family of snRNP core proteins maps
            within the mouse MHC
  JOURNAL   Immunogenetics 46 (5), 427-430 (1997)
   PUBMED   9271633
REFERENCE   9  (residues 1 to 596)
  AUTHORS   Snoek M, van Dinten L and van Vugt H.
  TITLE     A novel gene, G7e, resembling a viral envelope gene, is located at
            the recombinational hot spot in the class III region of the mouse
            MHC
  JOURNAL   Genomics 38 (1), 5-12 (1996)
   PUBMED   8954773
REFERENCE   10 (residues 1 to 596)
  AUTHORS   Snoek M, Olavesen MG, van Vugt H, Milner CM, Teuscher C and
            Campbell RD.
  TITLE     Coding sequences and levels of expression of Hsc70t are identical
            in mice with different Orch-1 alleles
  JOURNAL   Immunogenetics 40 (2), 159-162 (1994)
   PUBMED   8026864
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC087117.9 and AK075966.1.
            
            On Feb 24, 2015 this sequence version replaced NP_149066.1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: L78788.1, AK037701.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 18.54 cM"
     Protein         1..596
                     /product="MLV-related proviral Env polyprotein-like"
                     /calculated_mol_wt=65790
     Region          38..573
                     /region_name="TLV_coat"
                     /note="ENV polyprotein (coat polyprotein); pfam00429"
                     /db_xref="CDD:306850"
     CDS             1..596
                     /gene="D17H6S56E-5"
                     /gene_synonym="G7e"
                     /coded_by="NM_033075.3:574..2364"
                     /db_xref="GeneID:110956"
                     /db_xref="MGI:MGI:1306799"
ORIGIN      
        1 mkgdevsitr remlpsapdg iktpmttirf pkaktlqilt llisigvvqt spmphephnl
       61 twvitntatg tvinstshla pigtwfpdlv fdlcaladgt wdplglvwgc qhpaqhselr
      121 rtpfyvcpge grspqqtatc ggpesyfcay wgcestgsis wtppikddli kvqrspgses
      181 qgwgyglqpk ldandlggpc ssncnpitvq ftpkgkesvg wekgktwglr lyvsgydygv
      241 mftiqlsarq gmplgpnpal ppvgltvtqs qitvpisqel rprsgpwdll katylvlnns
      301 kpeltskcwl cldaqppyye giavpgnytt stdnkdcrwq ypgkgrltle liqgkglcfg
      361 tiphthrhlc nsiqeapdrd ayiippintw wacttgltsc ihtqalnltn gfcvlvqlap
      421 rilrysdemg trlspfpaar akratvaeil gasafdfqde nykvlssaid adlmelgksl
      481 sksktsltsl reatlrnqre qdfqslqqdg lckplekrcc tfvdnlkhar ellakvrkrl
      541 edrkremeqg qpvwitviat lsgflglvil ivicklyvvn plmdssrtrs ppsdty
//
LOCUS       NP_899000                552 aa            linear   ROD 31-OCT-2023
DEFINITION  zinc finger protein 811 isoform 1 [Mus musculus].
ACCESSION   NP_899000
VERSION     NP_899000.2
DBSOURCE    REFSEQ: accession NM_183177.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 552)
  AUTHORS   Bedogni F and Hevner RF.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 552)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   3  (residues 1 to 552)
  AUTHORS   Zambrowicz BP, Abuin A, Ramirez-Solis R, Richter LJ, Piggott J,
            BeltrandelRio H, Buxton EC, Edwards J, Finch RA, Friddle CJ, Gupta
            A, Hansen G, Hu Y, Huang W, Jaing C, Key BW Jr, Kipp P, Kohlhauff
            B, Ma ZQ, Markesich D, Payne R, Potter DG, Qian N, Shaw J, Schrick
            J, Shi ZZ, Sparks MJ, Van Sligtenhorst I, Vogel P, Walke W, Xu N,
            Zhu Q, Person C and Sands AT.
  TITLE     Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap
            screen to identify potential targets for therapeutic intervention
  JOURNAL   Proc Natl Acad Sci U S A 100 (24), 14109-14114 (2003)
   PUBMED   14610273
REFERENCE   4  (residues 1 to 552)
  AUTHORS   Carninci P and Hayashizaki Y.
  TITLE     High-efficiency full-length cDNA cloning
  JOURNAL   Methods Enzymol 303, 19-44 (1999)
   PUBMED   10349636
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CT485613.9, BC052046.1, AK132056.1 and AI413693.1.
            
            On Nov 28, 2007 this sequence version replaced NP_899000.1.
            
            Transcript Variant: This variant (1) encodes the longer isoform
            (1).
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments. A downstream
            translational start codon is selected for this RefSeq based on its
            better conservation in mammalian species and strong Kozak signal.
            An upstream in-frame start codon is also present but has a weaker
            Kozak signal and is only present in mouse; use of the upstream
            start codon would result in a protein that is 4 aa longer. Leaky
            scanning by ribosomes may allow translation initiation at the
            downstream start codon.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC052046.1, BB652974.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164133, SAMN01164137
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            CDS uses downstream in-frame AUG :: upstream AUG and CDS extension
                                                is not conserved
            RefSeq Select criteria           :: based on expression, longest
                                                protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 17.98 cM"
     Protein         1..552
                     /product="zinc finger protein 811 isoform 1"
                     /calculated_mol_wt=62859
     Region          3..44
                     /region_name="KRAB"
                     /note="KRAB box; pfam01352"
                     /db_xref="CDD:460171"
     Region          195..215
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <222..371
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          223..243
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          251..271
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          279..299
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(284,286,288,290..291,294..295,298,312,314,318..319,
                     322..323,326,340,342,344,346..347,350..351,354)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          307..327
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          335..355
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          363..383
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          391..411
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(396,398,400,402..403,406..407,410,424,426,430..431,
                     434..435,438,452,454,456,458..459,462..463,466)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          419..439
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          447..467
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          475..495
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(480,482,484,486..487,490..491,494,508,510,514..515,
                     518..519,522,536,538,540,542..543,546..547,550)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          503..523
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          531..550
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..552
                     /gene="Zfp811"
                     /coded_by="NM_183177.3:148..1806"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /db_xref="CCDS:CCDS79528.1"
                     /db_xref="GeneID:240063"
                     /db_xref="MGI:MGI:2682944"
ORIGIN      
        1 melvtfedva vhftmeewal ldlsqkelyk dvmkeilrnv vsigdirkhq kidnkyqnsg
       61 rklrcqlvek lhdckeghec aeifkfsteg tvnhefypgv hickrngfvn vlighlainv
      121 rlkprpgqks nevqehgknv ytkesqgtss aspslqkhqs aepaeksdkt kqpdedlrlg
      181 qnhertpaee khhkckhcgk actslsslkr heqhyhakkc skckqcgkaf pfpsslqvhq
      241 rihtgekpya cktcgktfgh sssllrheri htgsspheck lckktftrln sllrhkiiht
      301 gekpyacnqc gkafsrsasl qrhtrlhtge kpyvckqcgk afitstylqv herthtgekp
      361 yvckecgstf mlwtqfqkhk ivhsgvnpfv ckqcgkaftr lgtlqiheri htgekpyvck
      421 qcakafmslt qlrrheiihs gikpymckqc gkgflcsttl rshekihsgs npyvcsqcek
      481 vvssesalrk hkmihtgekp cvckqcgktf thlsslqyha lmhsgekphe ckkcgkgfrs
      541 lshlkkhert qh
//
LOCUS       NP_001371177             444 aa            linear   ROD 31-OCT-2023
DEFINITION  transmembrane protein 44 isoform 5 [Mus musculus].
ACCESSION   NP_001371177 XP_030104936
VERSION     NP_001371177.1
DBSOURCE    REFSEQ: accession NM_001384248.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 444)
  AUTHORS   Bedogni F and Hevner RF.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 444)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC104885.8.
            
            On Jun 12, 2020 this sequence version replaced XP_030104936.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR11927932.2169942.1,
                                           SRR7652917.455689.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 21.34 cM"
     Protein         1..444
                     /product="transmembrane protein 44 isoform 5"
                     /calculated_mol_wt=49013
     CDS             1..444
                     /gene="Tmem44"
                     /gene_synonym="1700007N03Rik; 9330161C17Rik; B230220N21"
                     /coded_by="NM_001384248.1:80..1414"
                     /note="isoform 5 is encoded by transcript variant 8"
                     /db_xref="GeneID:224090"
                     /db_xref="MGI:MGI:1924489"
ORIGIN      
        1 meegasaapp llnwdylerc farrrvcisf glwicaaccw iaahtlilyl rctkkcsqdq
       61 stlcaafcll tslcdtvgai larqltiqvf tgaylaavdf mnfmftlfpv cgsksksksg
      121 qssrerrrrh lrasvfalal plslgpgwai wtaipkapap vrgpqrrllg sllqenpevf
      181 gyllgaiaaf gswasrippf snicrgksls yihlwtrfls alagllyasa ivahdrqpey
      241 llqatpwfli slgraaldla iiflscviks rmsrafrfat aearesadtq alltcaekee
      301 enqeartedk nsdwvpltsl shckplrtmt aisrymelti epaqqagcsa trlpgdgqts
      361 trdaasqepp syppiqviqa rvssssssev ssinsdleqk ywealnseqw dpedvnlerk
      421 kdgellrvqv rraslspvdl asdd
//
LOCUS       NP_001254512              64 aa            linear   ROD 31-OCT-2023
DEFINITION  zinc finger protein 811 isoform 2 [Mus musculus].
ACCESSION   NP_001254512
VERSION     NP_001254512.1
DBSOURCE    REFSEQ: accession NM_001267583.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 64)
  AUTHORS   Bedogni F and Hevner RF.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 64)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   3  (residues 1 to 64)
  AUTHORS   Zambrowicz BP, Abuin A, Ramirez-Solis R, Richter LJ, Piggott J,
            BeltrandelRio H, Buxton EC, Edwards J, Finch RA, Friddle CJ, Gupta
            A, Hansen G, Hu Y, Huang W, Jaing C, Key BW Jr, Kipp P, Kohlhauff
            B, Ma ZQ, Markesich D, Payne R, Potter DG, Qian N, Shaw J, Schrick
            J, Shi ZZ, Sparks MJ, Van Sligtenhorst I, Vogel P, Walke W, Xu N,
            Zhu Q, Person C and Sands AT.
  TITLE     Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap
            screen to identify potential targets for therapeutic intervention
  JOURNAL   Proc Natl Acad Sci U S A 100 (24), 14109-14114 (2003)
   PUBMED   14610273
REFERENCE   4  (residues 1 to 64)
  AUTHORS   Carninci P and Hayashizaki Y.
  TITLE     High-efficiency full-length cDNA cloning
  JOURNAL   Methods Enzymol 303, 19-44 (1999)
   PUBMED   10349636
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CT485613.9, BM951801.1, AK132056.1 and AI413693.1.
            
            Transcript Variant: This variant (2) uses an alternate splice site
            in the 3' region, which results in an early stop codon, compared to
            variant 1. The encoded isoform (2) has a shorter C-terminus,
            compared to isoform 1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments. A downstream
            translational start codon is selected for this RefSeq based on its
            better conservation in mammalian species and strong Kozak signal.
            An upstream in-frame start codon is also present but has a weaker
            Kozak signal and is only present in mouse; use of the upstream
            start codon would result in a protein that is 4 aa longer. Leaky
            scanning by ribosomes may allow translation initiation at the
            downstream start codon.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR7345562.448353.1, BM951801.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164141 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            CDS uses downstream in-frame AUG :: upstream AUG and CDS extension
                                                is not conserved
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..64
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 17.98 cM"
     Protein         1..64
                     /product="zinc finger protein 811 isoform 2"
                     /calculated_mol_wt=7520
     Region          3..44
                     /region_name="KRAB"
                     /note="KRAB box; pfam01352"
                     /db_xref="CDD:460171"
     CDS             1..64
                     /gene="Zfp811"
                     /coded_by="NM_001267583.1:148..342"
                     /note="isoform 2 is encoded by transcript variant 2"
                     /db_xref="CCDS:CCDS89068.1"
                     /db_xref="GeneID:240063"
                     /db_xref="MGI:MGI:2682944"
ORIGIN      
        1 melvtfedva vhftmeewal ldlsqkelyk dvmkeilrnv vsigdirkhq kidnkyqnsg
       61 rklr
//
LOCUS       NP_001398424             495 aa            linear   ROD 31-OCT-2023
DEFINITION  ankyrin repeat domain-containing protein 34A [Mus musculus].
ACCESSION   NP_001398424 XP_006501773
VERSION     NP_001398424.1
DBSOURCE    REFSEQ: accession NM_001411495.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 495)
  AUTHORS   Bedogni F and Hevner RF.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 495)
  AUTHORS   Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, Magen
            A, Canidio E, Pagani M, Peluso I, Lin-Marq N, Koch M, Bilio M,
            Cantiello I, Verde R, De Masi C, Bianchi SA, Cicchini J, Perroud E,
            Mehmeti S, Dagand E, Schrinner S, Nurnberger A, Schmidt K, Metz K,
            Zwingmann C, Brieske N, Springer C, Hernandez AM, Herzog S, Grabbe
            F, Sieverding C, Fischer B, Schrader K, Brockmeyer M, Dettmer S,
            Helbig C, Alunni V, Battaini MA, Mura C, Henrichsen CN,
            Garcia-Lopez R, Echevarria D, Puelles E, Garcia-Calero E, Kruse S,
            Uhr M, Kauck C, Feng G, Milyaev N, Ong CK, Kumar L, Lam M, Semple
            CA, Gyenesei A, Mundlos S, Radelof U, Lehrach H, Sarmientos P,
            Reymond A, Davidson DR, Dolle P, Antonarakis SE, Yaspo ML, Martinez
            S, Baldock RA, Eichele G and Ballabio A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC122037.2.
            
            On Aug 26, 2022 this sequence version replaced XP_006501773.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR7345562.4131327.1,
                                           SRR7974084.29132.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849380, SAMN00849382
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 41.93 cM"
     Protein         1..495
                     /product="ankyrin repeat domain-containing protein 34A"
                     /note="ankyrin repeat domain 34"
                     /calculated_mol_wt=52319
     Region          <8..>133
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          8..35
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(10..11,14..16,18..19,23,26,35,37,39,43..44,47..49,
                     51..52,62,65,74,76,78,83..84,87..89,91..92,96,99,108)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          37..74
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          76..108
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          110..136
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..495
                     /gene="Ankrd34a"
                     /gene_synonym="Ankrd34"
                     /coded_by="NM_001411495.1:248..1735"
                     /db_xref="GeneID:545554"
                     /db_xref="MGI:MGI:3617846"
ORIGIN      
        1 mlhteghall ravgqgklrl arllleggay vnegdaqget almaacrary ddpqnkarmv
       61 rylleqgadp niadrlgrta lmhacagggg aavaslllah gadpsvrdha gasalvhald
      121 rgdretlatl ldackakgte viiittdtsp sgtkktrqyl nsppspgved papappspgv
      181 ctspsevqlq tagggrglls praqeeeekr difefplpkp pddpspsepl pkpprhppkp
      241 lkrlnsepwg lvappqpvpp aegrpglerl aaefngltlt grprlsrrhs tegpedpppw
      301 aekvtgggpl srrntapeaq esglpsglrq klsrmepvel dtpghfcpds pessrlsler
      361 rrysaspltl ppagsvsspr qsqeslpgav splsgrrrsp gllerrgsgt llldhisqtr
      421 pgflpplnvs phppipdirp qpggrapslp apppsgapgs prtkrklvrr hsmqteqirl
      481 lggfqslggp gepgr
//
LOCUS       NP_853626               1095 aa            linear   ROD 31-OCT-2023
DEFINITION  neurabin-1 isoform 1 [Mus musculus].
ACCESSION   NP_853626
VERSION     NP_853626.1
DBSOURCE    REFSEQ: accession NM_181595.4
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 1095)
  AUTHORS   Salamon I, Park Y, Miskic T, Kopic J, Matteson P, Page NF, Roque A,
            McAuliffe GW, Favate J, Garcia-Forn M, Shah P, Judas M, Millonig
            JH, Kostovic I, De Rubeis S, Hart RP, Krsnik Z and Rasin MR.
  TITLE     Celf4 controls mRNA translation underlying synaptic development in
            the prenatal mammalian neocortex
  JOURNAL   Nat Commun 14 (1), 6025 (2023)
   PUBMED   37758766
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 1095)
  AUTHORS   Edler,M.C., Salek,A.B., Watkins,D.S., Kaur,H., Morris,C.W.,
            Yamamoto,B.K. and Baucum,A.J. 2nd.
  TITLE     Mechanisms Regulating the Association of Protein Phosphatase 1 with
            Spinophilin and Neurabin
  JOURNAL   ACS Chem Neurosci 9 (11), 2701-2712 (2018)
   PUBMED   29786422
REFERENCE   3  (residues 1 to 1095)
  AUTHORS   Wu H, Cottingham C, Chen L, Wang H, Che P, Liu K and Wang Q.
  TITLE     Age-dependent differential regulation of anxiety- and
            depression-related behaviors by neurabin and spinophilin
  JOURNAL   PLoS One 12 (7), e0180638 (2017)
   PUBMED   28700667
  REMARK    GeneRIF: two homologs neurabin and spinophilin play important yet
            distinct roles in the regulation of anxiety- and depression-like
            behaviors in an age-dependent manner.
            Publication Status: Online-Only
REFERENCE   4  (residues 1 to 1095)
  AUTHORS   Che P, Chen Y, Lu R, Peng N, Gannon M, Wyss JM, Jiao K and Wang Q.
  TITLE     Spinophilin Is Indispensable for the alpha2B Adrenergic
            Receptor-Elicited Hypertensive Response
  JOURNAL   PLoS One 10 (8), e0135030 (2015)
   PUBMED   26244553
  REMARK    GeneRIF: Data indicate that In arrestin 3 deficient mice, where the
            alpha2B adrenergic receptor has a stronger binding to spinophilin,
            the hypertensive response is enhanced.
            Publication Status: Online-Only
REFERENCE   5  (residues 1 to 1095)
  AUTHORS   Chen Y, Liu Y, Cottingham C, McMahon L, Jiao K, Greengard P and
            Wang Q.
  TITLE     Neurabin scaffolding of adenosine receptor and RGS4 regulates
            anti-seizure effect of endogenous adenosine
  JOURNAL   J Neurosci 32 (8), 2683-2695 (2012)
   PUBMED   22357852
REFERENCE   6  (residues 1 to 1095)
  AUTHORS   Orioli D, Colaluca IN, Stefanini M, Riva S, Dotti CG and Peverali
            FA.
  TITLE     Rac3-induced neuritogenesis requires binding to Neurabin I
  JOURNAL   Mol Biol Cell 17 (5), 2391-2400 (2006)
   PUBMED   16525025
  REMARK    GeneRIF: Neurabin I mediates Rac3-induced neuritogenesis, possibly
            by anchoring Rac3 to growth cone F-actin.
REFERENCE   7  (residues 1 to 1095)
  AUTHORS   Ono R, Nakamura K, Inoue K, Naruse M, Usami T, Wakisaka-Saito N,
            Hino T, Suzuki-Migishima R, Ogonuki N, Miki H, Kohda T, Ogura A,
            Yokoyama M, Kaneko-Ishino T and Ishino F.
  TITLE     Deletion of Peg10, an imprinted gene acquired from a
            retrotransposon, causes early embryonic lethality
  JOURNAL   Nat Genet 38 (1), 101-106 (2006)
   PUBMED   16341224
REFERENCE   8  (residues 1 to 1095)
  AUTHORS   Ryan XP, Alldritt J, Svenningsson P, Allen PB, Wu GY, Nairn AC and
            Greengard P.
  TITLE     The Rho-specific GEF Lfc interacts with neurabin and spinophilin to
            regulate dendritic spine morphology
  JOURNAL   Neuron 47 (1), 85-100 (2005)
   PUBMED   15996550
REFERENCE   9  (residues 1 to 1095)
  AUTHORS   Carmody LC, Bauman PA, Bass MA, Mavila N, DePaoli-Roach AA and
            Colbran RJ.
  TITLE     A protein phosphatase-1gamma1 isoform selectivity determinant in
            dendritic spine-associated neurabin
  JOURNAL   J Biol Chem 279 (21), 21714-21723 (2004)
   PUBMED   15016827
  REMARK    GeneRIF: there is a novel PP1gamma1-selective interaction domain in
            neurabin that may allow for selective regulation and/or subcellular
            targeting of PP1 isoforms
REFERENCE   10 (residues 1 to 1095)
  AUTHORS   Ono R, Shiura H, Aburatani H, Kohda T, Kaneko-Ishino T and Ishino
            F.
  TITLE     Identification of a large novel imprinted gene cluster on mouse
            proximal chromosome 6
  JOURNAL   Genome Res 13 (7), 1696-1705 (2003)
   PUBMED   12840045
  REMARK    GeneRIF: Ppp1r9a gene, found in a cluster of imprinted genes on
            chromosome 6, is preferentially expressed from the maternal allele
            at embryonic stages, but biallelically expressed in neonatal
            tissues.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC068500.4 and AC074225.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AB091828.1, SRR17784647.1222906.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN01164131
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            imprinted gene :: PMID: 12840045
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1095
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 1.86 cM"
     Protein         1..1095
                     /product="neurabin-1 isoform 1"
                     /note="neural tissue-specific F-actin binding protein;
                     protein phosphatase 1, regulatory (inhibitor) subunit 9A;
                     neurabin-1"
                     /calculated_mol_wt=122824
     Region          435..498
                     /region_name="PDZ_5"
                     /note="PDZ domain; pfam17817"
                     /db_xref="CDD:465518"
     Region          502..591
                     /region_name="PDZ_neurabin-like"
                     /note="PDZ domain of neurabin-1 and neurabin-2, and
                     related domains; cd06790"
                     /db_xref="CDD:467252"
     Site            order(514..520,538,541,571,575,578..579)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467252"
     Region          671..>824
                     /region_name="DR0291"
                     /note="Predicted nucleic acid-binding protein DR0291,
                     contains C4-type Zn-ribbon domain [General function
                     prediction only]; COG1579"
                     /db_xref="CDD:441187"
     Region          983..1052
                     /region_name="SAM_Neurabin-like"
                     /note="SAM domain of SAM_Neurabin-like subfamily; cd09512"
                     /db_xref="CDD:188911"
     CDS             1..1095
                     /gene="Ppp1r9a"
                     /gene_synonym="2810430P21Rik; 4930518N04Rik; 5330407E15;
                     A230094E16Rik; neurabin-I; NRB"
                     /coded_by="NM_181595.4:360..3647"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /db_xref="CCDS:CCDS19897.1"
                     /db_xref="GeneID:243725"
                     /db_xref="MGI:MGI:2442401"
ORIGIN      
        1 mlkaessger ttlrsasphr nayrtefqal kstfdkpksd geqktkegeg sqqsrgrkyg
       61 snvnriknlf mqmgmepsen aaiiaktrgk grpsspqrrm kpkefvektd gsvvklessv
      121 serisrfdtm hdgpsyakft etrkmfersv hesgqnhrys pkkekgggte pqdewggsks
      181 nrgssdslds lsprteavsp tvsqlsavfe nseppgalts gkaesadysv tghyplnlps
      241 vtvtnldtfg rlkdsnskpp snkqdtdted aqksdavpvp evaqkgtsla slpseesqls
      301 teaedvttaq pealdstdkd speepsaenq ampkshilsp rnepledaea nvvgseraqh
      361 qkkdltggdl tspdasassc grevpedsns fesshvymhs dynvyrvrsr ynsdwgetgt
      421 eqdeeedsde nnyyqpdmey seivglpeee eipanrkikf scapikvfnt ysnedydrrn
      481 ddvdpvaasa eyelekrvek lelfpvelek dedglgisii gmgvgadagl eklgifvktv
      541 tdggaaqrdg riqvndqive vdgislvgvt qnfaatvlrn tkgnvrfvig rekpgqvsev
      601 aqlisqtleq errqreller hyaqydaddd etgeyatdee edeggpilps gdvaievfel
      661 penedmfsps dldtsklshk fkelqikhav teaeiqklkt klqaaenekv rweleknqlq
      721 qnieenkerm lklesywiea qtlchtvneh lketqsqyqa lekkynkakk likdfqqkel
      781 dfikrqever kkreevekah llevqglqvr irdleaevfr llkqngtqvn nnnniferrp
      841 spgevskgdt menvevkqts cqdglsqdln eavpeterld skalktraql svknrrqrpt
      901 rtrlydsvss tdgedslerk nftfnddfsp sstssadlsg lgaepktpgl sqslalssde
      961 sldmiddeil ddgqspkhtq sqnravhews vqqvshwlms lsldqyvpef saqsisgeql
     1021 lqldgnklka lgmtssqdra lvkkklkemk mslekarkaq ekmekqrekl rrkeqeqmqr
     1081 kskksekmts tadqp
//
LOCUS       NP_001348226             333 aa            linear   ROD 31-OCT-2023
DEFINITION  transmembrane protein 44 isoform 4 [Mus musculus].
ACCESSION   NP_001348226 XP_006522134
VERSION     NP_001348226.1
DBSOURCE    REFSEQ: accession NM_001361297.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 333)
  AUTHORS   Bedogni F and Hevner RF.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 333)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK048655.1, CV562351.1, AK082652.1, BC059216.1 and BC080307.1.
            
            On Mar 28, 2018 this sequence version replaced XP_006522134.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC059216.1, SRR1660823.55642.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164139 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 21.34 cM"
     Protein         1..333
                     /product="transmembrane protein 44 isoform 4"
                     /calculated_mol_wt=36593
     CDS             1..333
                     /gene="Tmem44"
                     /gene_synonym="1700007N03Rik; 9330161C17Rik; B230220N21"
                     /coded_by="NM_001361297.1:1350..2351"
                     /note="isoform 4 is encoded by transcript variant 5"
                     /db_xref="GeneID:224090"
                     /db_xref="MGI:MGI:1924489"
ORIGIN      
        1 mnfmftlfpv cgsksksksg qssrerrrrh lrasvfalal plslgpgwai wtaipkapap
       61 vrgpqrrllg sllqenpevf gyllgaiaaf gswasrippf snicrgksls yihlwtrfls
      121 alagllyasa ivahdrqpey llqatpwfli slgraaldla iiflscviks rmsrafrfat
      181 aearesadtq alltcaekee enqeartedk nsdwvpltsl shckplrtmt aisrymelti
      241 epaqqagcsa trlpgdgqts trdaasqepp syppiqviqa rvssssssev ssinsdlewd
      301 pedvnlerkk dgellrvqvr raslspvdla sdd
//
LOCUS       NP_001186250             486 aa            linear   ROD 31-OCT-2023
DEFINITION  zinc finger protein 45 isoform 1 [Mus musculus].
ACCESSION   NP_001186250
VERSION     NP_001186250.1
DBSOURCE    REFSEQ: accession NM_001199321.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 486)
  AUTHORS   Bedogni F and Hevner RF.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 486)
  AUTHORS   Yokoyama S, Ito Y, Ueno-Kudoh H, Shimizu H, Uchibe K, Albini S,
            Mitsuoka K, Miyaki S, Kiso M, Nagai A, Hikata T, Osada T, Fukuda N,
            Yamashita S, Harada D, Mezzano V, Kasai M, Puri PL, Hayashizaki Y,
            Okado H, Hashimoto M and Asahara H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
REFERENCE   3  (residues 1 to 486)
  AUTHORS   Weissig H, Narisawa S, Sikstrom C, Olsson PG, McCarrey JR, Tsonis
            PA, Del Rio-Tsonis K and Millan JL.
  TITLE     Three novel spermatogenesis-specific zinc finger genes
  JOURNAL   FEBS Lett 547 (1-3), 61-68 (2003)
   PUBMED   12860387
  REMARK    GeneRIF: cloning and characterization of its expression during
            spermatogenesis
REFERENCE   4  (residues 1 to 486)
  AUTHORS   Shannon M and Stubbs L.
  TITLE     Analysis of homologous XRCC1-linked zinc-finger gene families in
            human and mouse: evidence for orthologous genes
  JOURNAL   Genomics 49 (1), 112-121 (1998)
   PUBMED   9570955
REFERENCE   5  (residues 1 to 486)
  AUTHORS   Stubbs L, Carver EA, Shannon ME, Kim J, Geisler J, Generoso EE,
            Stanford BG, Dunn WC, Mohrenweiser H, Zimmermann W, Watt SM and
            Ashworth LK.
  TITLE     Detailed comparative map of human chromosome 19q and related
            regions of the mouse genome
  JOURNAL   Genomics 35 (3), 499-508 (1996)
   PUBMED   8812484
REFERENCE   6  (residues 1 to 486)
  AUTHORS   Shannon M, Ashworth LK, Mucenski ML, Lamerdin JE, Branscomb E and
            Stubbs L.
  TITLE     Comparative analysis of a conserved zinc finger gene cluster on
            human chromosome 19q and mouse chromosome 7
  JOURNAL   Genomics 33 (1), 112-120 (1996)
   PUBMED   8617494
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC159140.10 and AK138205.1.
            
            Transcript Variant: This variant (1) encodes the longer protein
            (isoform 1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK138205.1, SRR9219379.29266.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164141, SAMN01164142
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 10.27 cM"
     Protein         1..486
                     /product="zinc finger protein 45 isoform 1"
                     /calculated_mol_wt=55420
     Region          7..48
                     /region_name="KRAB"
                     /note="KRAB box; pfam01352"
                     /db_xref="CDD:460171"
     Region          165..185
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          178..202
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          193..213
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          221..241
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <226..425
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          249..269
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(254,256,258,260..261,264..265,268,282,284,288..289,
                     292..293,296,310,312,314,316..317,320..321,324)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          277..297
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          305..325
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          333..353
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          361..381
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          389..409
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(394,396,398,400..401,404..405,408,422,424,428..429,
                     432..433,436,450,452,454,456..457,460..461,464)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          417..437
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          429..453
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          445..465
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..486
                     /gene="Zfp94"
                     /coded_by="NM_001199321.1:349..1809"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /db_xref="CCDS:CCDS57524.1"
                     /db_xref="GeneID:22756"
                     /db_xref="MGI:MGI:107610"
ORIGIN      
        1 mtkvkemvtf rdvavvfsee elglldaaqr klyhdvmlen frmllsvgdk npeemeslee
       61 vglrhlshea lfcsqiwqqv srdlmkagdc rvsiretgsp lkrddahgad rkyskhsgqk
      121 pwlqlhcgtd ggeepyreer sekdswdspl qangrppage kryrcekcdh afcrlsglqa
      181 hqvrhtgekp ykceecgkgf trastlldhq rghtgnkpyq chacwksfch ssefnnhirv
      241 htgekpyvce ecgkgfsqas hllahqrght gekpykcstc gkgfsrssdl nvhcrihtge
      301 kpykcetcgk afsrvsilqv hqrvhsedkp yqcaecgrgf tveshlqahq rshtgerpyq
      361 ceecgrgfcr asnflahrgv htgekpyrcd icgkrfrqrs ylhdhhriht gekpykceec
      421 gkvfswssyl kahqrvhtge kpyrceecgk gfswssslli hqrahaedeg rkdlpasegs
      481 qgkqtl
//
LOCUS       NP_001396439             274 aa            linear   ROD 31-OCT-2023
DEFINITION  transcription factor-like 5 protein isoform 5 [Mus musculus].
ACCESSION   NP_001396439
VERSION     NP_001396439.1
DBSOURCE    REFSEQ: accession NM_001409510.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 274)
  AUTHORS   Zhang FL, Feng YQ, Wang JY, Zhu KX, Wang L, Yan JM, Li XX, Wang JJ,
            Ge W, De Felici M and Shen W.
  TITLE     Single cell epigenomic and transcriptomic analysis uncovers
            potential transcription factors regulating mitotic/meiotic switch
  JOURNAL   Cell Death Dis 14 (2), 134 (2023)
   PUBMED   36797258
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 274)
  AUTHORS   Cecchini K, Biasini A, Yu T, Saflund M, Mou H, Arif A, Eghbali A,
            Colpan C, Gainetdinov I, de Rooij DG, Weng Z, Zamore PD and Ozata
            DM.
  TITLE     The transcription factor TCFL5 responds to A-MYB to elaborate the
            male meiotic program in mice
  JOURNAL   Reproduction 165 (2), 183-196 (2023)
   PUBMED   36395073
  REMARK    GeneRIF: The transcription factor TCFL5 responds to A-MYB to
            elaborate the male meiotic program in mice.
            Publication Status: Online-Only
REFERENCE   3  (residues 1 to 274)
  AUTHORS   Yu T, Biasini A, Cecchini K, Saflund M, Mou H, Arif A, Eghbali A,
            de Rooij D, Weng Z, Zamore PD and Ozata DM.
  TITLE     A-MYB/TCFL5 regulatory architecture ensures the production of
            pachytene piRNAs in placental mammals
  JOURNAL   RNA 29 (1), 30-43 (2022)
   PUBMED   36241367
  REMARK    Publication Status: Available-Online prior to print
REFERENCE   4  (residues 1 to 274)
  AUTHORS   Galan-Martinez J, Berenguer I, Del Carmen Maza M, Stamatakis K,
            Girones N and Fresno M.
  TITLE     TCFL5 deficiency impairs the pachytene to diplotene transition
            during spermatogenesis in the mouse
  JOURNAL   Sci Rep 12 (1), 10956 (2022)
   PUBMED   35768632
  REMARK    GeneRIF: TCFL5 deficiency impairs the pachytene to diplotene
            transition during spermatogenesis in the mouse.
            Publication Status: Online-Only
REFERENCE   5  (residues 1 to 274)
  AUTHORS   Xu W, Zhang Y, Qin D, Gui Y, Wang S, Du G, Yang F, Li L, Yuan S,
            Wang M and Wu X.
  TITLE     Transcription factor-like 5 is a potential DNA- and RNA-binding
            protein essential for maintaining male fertility in mice
  JOURNAL   J Cell Sci 135 (3) (2022)
   PUBMED   34931239
  REMARK    GeneRIF: Transcription factor-like 5 is a potential DNA- and
            RNA-binding protein essential for maintaining male fertility in
            mice.
REFERENCE   6  (residues 1 to 274)
  AUTHORS   Thompson CL, Ng L, Menon V, Martinez S, Lee CK, Glattfelder K,
            Sunkin SM, Henry A, Lau C, Dang C, Garcia-Lopez R, Martinez-Ferre
            A, Pombero A, Rubenstein JLR, Wakeman WB, Hohmann J, Dee N, Sodt
            AJ, Young R, Smith K, Nguyen TN, Kidney J, Kuan L, Jeromin A,
            Kaykas A, Miller J, Page D, Orta G, Bernard A, Riley Z, Smith S,
            Wohnoutka P, Hawrylycz MJ, Puelles L and Jones AR.
  TITLE     A high-resolution spatiotemporal atlas of gene expression of the
            developing mouse brain
  JOURNAL   Neuron 83 (2), 309-323 (2014)
   PUBMED   24952961
REFERENCE   7  (residues 1 to 274)
  AUTHORS   Gallardo TD, John GB, Shirley L, Contreras CM, Akbay EA, Haynie JM,
            Ward SE, Shidler MJ and Castrillon DH.
  TITLE     Genomewide discovery and classification of candidate ovarian
            fertility genes in the mouse
  JOURNAL   Genetics 177 (1), 179-194 (2007)
   PUBMED   17660561
  REMARK    GeneRIF: Transcripts highly enriched in ovary; gene identified as
            candidate female fertility factor.
REFERENCE   8  (residues 1 to 274)
  AUTHORS   Ballow D, Meistrich ML, Matzuk M and Rajkovic A.
  TITLE     Sohlh1 is essential for spermatogonial differentiation
  JOURNAL   Dev Biol 294 (1), 161-167 (2006)
   PUBMED   16564520
REFERENCE   9  (residues 1 to 274)
  AUTHORS   Willnow T, Antignac C, Brandli A, Christensen E, Cox R, Davidson D,
            Davies J, Devuyst O, Eichele G, Hastie N, Verroust P, Schedl A and
            Meij I.
  TITLE     The European renal genome project: an integrated approach towards
            understanding the genetics of kidney development and disease
  JOURNAL   Organogenesis 2 (2), 42-47 (2005)
   PUBMED   19521566
REFERENCE   10 (residues 1 to 274)
  AUTHORS   Siep M, Sleddens-Linkels E, Mulders S, van Eenennaam H, Wassenaar
            E, Van Cappellen WA, Hoogerbrugge J, Grootegoed JA and Baarends WM.
  TITLE     Basic helix-loop-helix transcription factor Tcfl5 interacts with
            the Calmegin gene promoter in mouse spermatogenesis
  JOURNAL   Nucleic Acids Res 32 (21), 6425-6436 (2004)
   PUBMED   15585666
  REMARK    GeneRIF: Tcfl5 is a testis-specific transcription factor that
            interacts with the calmegin gene promoter during spermatogenesis.
            Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL732560.11 and AL669926.6.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5189685.161931.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849381 [ECO:0006172]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 103.16 cM"
     Protein         1..274
                     /product="transcription factor-like 5 protein isoform 5"
                     /note="FIG beta; factor in the germline beta;
                     spermatogenesis- and oogenesis-specific bHLH-containing
                     protein 1"
                     /calculated_mol_wt=30417
     Region          174..233
                     /region_name="bHLH_TCFL5"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor-like 5 protein (TCFL5) and similar
                     proteins; cd18909"
                     /db_xref="CDD:381479"
     Site            order(175..180,183..184,186..187,209..210)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381479"
     Site            order(187,189..190,193..194,196..197,200,210..212,
                     214..215,217..218,220..222,224..225)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381479"
     CDS             1..274
                     /gene="Tcfl5"
                     /gene_synonym="Figlb; Sosf1"
                     /coded_by="NM_001409510.1:881..1705"
                     /note="isoform 5 is encoded by transcript variant 5"
                     /db_xref="GeneID:277353"
                     /db_xref="MGI:MGI:2672878"
ORIGIN      
        1 mnvplhqqqn kcttlvknkt aaattalqft yplftsacst ggnaslaqtq sssnscsile
       61 aakhqdiglp rafsfcyqqe iestkqtggs rnkalpeqvw ikvgeealck qainkrnrsr
      121 irqldtsver ralgeiqnvg egsstsqgtw qssessqsnl geqtqsgpqg grsqrrerhn
      181 rmerdrrrri riccdelnll vpfcnaetdk attlqwttaf lkyiqerhgd slkkefesvf
      241 cgktgrrlkl trpeslvtcp aqgslqsspa meik
//
LOCUS       NP_839985                489 aa            linear   ROD 31-OCT-2023
DEFINITION  transcription factor-like 5 protein isoform 2 [Mus musculus].
ACCESSION   NP_839985
VERSION     NP_839985.2
DBSOURCE    REFSEQ: accession NM_178254.4
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 489)
  AUTHORS   Zhang FL, Feng YQ, Wang JY, Zhu KX, Wang L, Yan JM, Li XX, Wang JJ,
            Ge W, De Felici M and Shen W.
  TITLE     Single cell epigenomic and transcriptomic analysis uncovers
            potential transcription factors regulating mitotic/meiotic switch
  JOURNAL   Cell Death Dis 14 (2), 134 (2023)
   PUBMED   36797258
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 489)
  AUTHORS   Cecchini K, Biasini A, Yu T, Saflund M, Mou H, Arif A, Eghbali A,
            Colpan C, Gainetdinov I, de Rooij DG, Weng Z, Zamore PD and Ozata
            DM.
  TITLE     The transcription factor TCFL5 responds to A-MYB to elaborate the
            male meiotic program in mice
  JOURNAL   Reproduction 165 (2), 183-196 (2023)
   PUBMED   36395073
  REMARK    GeneRIF: The transcription factor TCFL5 responds to A-MYB to
            elaborate the male meiotic program in mice.
            Publication Status: Online-Only
REFERENCE   3  (residues 1 to 489)
  AUTHORS   Yu T, Biasini A, Cecchini K, Saflund M, Mou H, Arif A, Eghbali A,
            de Rooij D, Weng Z, Zamore PD and Ozata DM.
  TITLE     A-MYB/TCFL5 regulatory architecture ensures the production of
            pachytene piRNAs in placental mammals
  JOURNAL   RNA 29 (1), 30-43 (2022)
   PUBMED   36241367
  REMARK    Publication Status: Available-Online prior to print
REFERENCE   4  (residues 1 to 489)
  AUTHORS   Galan-Martinez J, Berenguer I, Del Carmen Maza M, Stamatakis K,
            Girones N and Fresno M.
  TITLE     TCFL5 deficiency impairs the pachytene to diplotene transition
            during spermatogenesis in the mouse
  JOURNAL   Sci Rep 12 (1), 10956 (2022)
   PUBMED   35768632
  REMARK    GeneRIF: TCFL5 deficiency impairs the pachytene to diplotene
            transition during spermatogenesis in the mouse.
            Publication Status: Online-Only
REFERENCE   5  (residues 1 to 489)
  AUTHORS   Xu W, Zhang Y, Qin D, Gui Y, Wang S, Du G, Yang F, Li L, Yuan S,
            Wang M and Wu X.
  TITLE     Transcription factor-like 5 is a potential DNA- and RNA-binding
            protein essential for maintaining male fertility in mice
  JOURNAL   J Cell Sci 135 (3) (2022)
   PUBMED   34931239
  REMARK    GeneRIF: Transcription factor-like 5 is a potential DNA- and
            RNA-binding protein essential for maintaining male fertility in
            mice.
REFERENCE   6  (residues 1 to 489)
  AUTHORS   Thompson CL, Ng L, Menon V, Martinez S, Lee CK, Glattfelder K,
            Sunkin SM, Henry A, Lau C, Dang C, Garcia-Lopez R, Martinez-Ferre
            A, Pombero A, Rubenstein JLR, Wakeman WB, Hohmann J, Dee N, Sodt
            AJ, Young R, Smith K, Nguyen TN, Kidney J, Kuan L, Jeromin A,
            Kaykas A, Miller J, Page D, Orta G, Bernard A, Riley Z, Smith S,
            Wohnoutka P, Hawrylycz MJ, Puelles L and Jones AR.
  TITLE     A high-resolution spatiotemporal atlas of gene expression of the
            developing mouse brain
  JOURNAL   Neuron 83 (2), 309-323 (2014)
   PUBMED   24952961
REFERENCE   7  (residues 1 to 489)
  AUTHORS   Gallardo TD, John GB, Shirley L, Contreras CM, Akbay EA, Haynie JM,
            Ward SE, Shidler MJ and Castrillon DH.
  TITLE     Genomewide discovery and classification of candidate ovarian
            fertility genes in the mouse
  JOURNAL   Genetics 177 (1), 179-194 (2007)
   PUBMED   17660561
  REMARK    GeneRIF: Transcripts highly enriched in ovary; gene identified as
            candidate female fertility factor.
REFERENCE   8  (residues 1 to 489)
  AUTHORS   Ballow D, Meistrich ML, Matzuk M and Rajkovic A.
  TITLE     Sohlh1 is essential for spermatogonial differentiation
  JOURNAL   Dev Biol 294 (1), 161-167 (2006)
   PUBMED   16564520
REFERENCE   9  (residues 1 to 489)
  AUTHORS   Willnow T, Antignac C, Brandli A, Christensen E, Cox R, Davidson D,
            Davies J, Devuyst O, Eichele G, Hastie N, Verroust P, Schedl A and
            Meij I.
  TITLE     The European renal genome project: an integrated approach towards
            understanding the genetics of kidney development and disease
  JOURNAL   Organogenesis 2 (2), 42-47 (2005)
   PUBMED   19521566
REFERENCE   10 (residues 1 to 489)
  AUTHORS   Siep M, Sleddens-Linkels E, Mulders S, van Eenennaam H, Wassenaar
            E, Van Cappellen WA, Hoogerbrugge J, Grootegoed JA and Baarends WM.
  TITLE     Basic helix-loop-helix transcription factor Tcfl5 interacts with
            the Calmegin gene promoter in mouse spermatogenesis
  JOURNAL   Nucleic Acids Res 32 (21), 6425-6436 (2004)
   PUBMED   15585666
  REMARK    GeneRIF: Tcfl5 is a testis-specific transcription factor that
            interacts with the calmegin gene promoter during spermatogenesis.
            Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL732560.11 and AL669926.6.
            
            On Mar 17, 2009 this sequence version replaced NP_839985.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC108399.1, SRR15390195.552322.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN01164139
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 103.16 cM"
     Protein         1..489
                     /product="transcription factor-like 5 protein isoform 2"
                     /note="FIG beta; factor in the germline beta;
                     spermatogenesis- and oogenesis-specific bHLH-containing
                     protein 1"
                     /calculated_mol_wt=51826
     Region          389..448
                     /region_name="bHLH_TCFL5"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor-like 5 protein (TCFL5) and similar
                     proteins; cd18909"
                     /db_xref="CDD:381479"
     Site            order(390..395,398..399,401..402,424..425)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381479"
     Site            order(402,404..405,408..409,411..412,415,425..427,
                     429..430,432..433,435..437,439..440)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381479"
     CDS             1..489
                     /gene="Tcfl5"
                     /gene_synonym="Figlb; Sosf1"
                     /coded_by="NM_178254.4:159..1628"
                     /note="isoform 2 is encoded by transcript variant 2"
                     /db_xref="CCDS:CCDS17181.2"
                     /db_xref="GeneID:277353"
                     /db_xref="MGI:MGI:2672878"
ORIGIN      
        1 msgpgprepp peagatggea gpegagggda algepglsft ttdlslvemt eveytqlqhi
       61 lyshmeaadg elearlgsal lagpgagsga agslapappv ypvlcpplaa dapclghvdf
      121 qelrmmllge agaaektpgg adgtrtradg vakegaggag pdgapearak ptvrvrledr
      181 fnsmpaeppa prgaepaesg valnnlvtli rhpselmnvp lhqqqnkctt lvknktaaat
      241 talqftyplf tsacstggna slaqtqsssn scsileaakh qdiglprafs fcyqqeiest
      301 kqtggsrnka lpeqvwikvg ealckqaink rnrsrirqld tsverralge iqnvgegsst
      361 sqgtwqsses sqsnlgeqtq sgpqggrsqr rerhnrmerd rrrririccd elnllvpfcn
      421 aetdkattlq wttaflkyiq erhgdslkke fesvfcgktg rrlkltrpes lvtcpaqgsl
      481 qsspameik
//
LOCUS       NP_001344344             344 aa            linear   ROD 31-OCT-2023
DEFINITION  transmembrane protein 44 isoform 3 [Mus musculus].
ACCESSION   NP_001344344
VERSION     NP_001344344.1
DBSOURCE    REFSEQ: accession NM_001357415.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 344)
  AUTHORS   Bedogni F and Hevner RF.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 344)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC104885.8.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC080307.1, SRR7345562.2475313.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 21.34 cM"
     Protein         1..344
                     /product="transmembrane protein 44 isoform 3"
                     /calculated_mol_wt=37970
     CDS             1..344
                     /gene="Tmem44"
                     /gene_synonym="1700007N03Rik; 9330161C17Rik; B230220N21"
                     /coded_by="NM_001357415.1:445..1479"
                     /note="isoform 3 is encoded by transcript variant 4"
                     /db_xref="GeneID:224090"
                     /db_xref="MGI:MGI:1924489"
ORIGIN      
        1 mnfmftlfpv cgsksksksg qssrerrrrh lrasvfalal plslgpgwai wtaipkapap
       61 vrgpqrrllg sllqenpevf gyllgaiaaf gswasrippf snicrgksls yihlwtrfls
      121 alagllyasa ivahdrqpey llqatpwfli slgraaldla iiflscviks rmsrafrfat
      181 aearesadtq alltcaekee enqeartedk nsdwvpltsl shckplrtmt aisrymelti
      241 epaqqagcsa trlpgdgqts trdaasqepp syppiqviqa rvssssssev ssinsdleqk
      301 ywealnseqw dpedvnlerk kdgellrvqv rraslspvdl asdd
//
LOCUS       NP_001344342             344 aa            linear   ROD 31-OCT-2023
DEFINITION  transmembrane protein 44 isoform 3 [Mus musculus].
ACCESSION   NP_001344342 XP_006522133
VERSION     NP_001344342.1
DBSOURCE    REFSEQ: accession NM_001357413.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 344)
  AUTHORS   Bedogni F and Hevner RF.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 344)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC104885.8.
            
            On Oct 27, 2017 this sequence version replaced XP_006522133.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK045675.1, SRR7345562.4545464.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 21.34 cM"
     Protein         1..344
                     /product="transmembrane protein 44 isoform 3"
                     /calculated_mol_wt=37970
     CDS             1..344
                     /gene="Tmem44"
                     /gene_synonym="1700007N03Rik; 9330161C17Rik; B230220N21"
                     /coded_by="NM_001357413.1:449..1483"
                     /note="isoform 3 is encoded by transcript variant 3"
                     /db_xref="GeneID:224090"
                     /db_xref="MGI:MGI:1924489"
ORIGIN      
        1 mnfmftlfpv cgsksksksg qssrerrrrh lrasvfalal plslgpgwai wtaipkapap
       61 vrgpqrrllg sllqenpevf gyllgaiaaf gswasrippf snicrgksls yihlwtrfls
      121 alagllyasa ivahdrqpey llqatpwfli slgraaldla iiflscviks rmsrafrfat
      181 aearesadtq alltcaekee enqeartedk nsdwvpltsl shckplrtmt aisrymelti
      241 epaqqagcsa trlpgdgqts trdaasqepp syppiqviqa rvssssssev ssinsdleqk
      301 ywealnseqw dpedvnlerk kdgellrvqv rraslspvdl asdd
//
LOCUS       NP_001371178             333 aa            linear   ROD 31-OCT-2023
DEFINITION  transmembrane protein 44 isoform 4 [Mus musculus].
ACCESSION   NP_001371178 XP_030104944
VERSION     NP_001371178.1
DBSOURCE    REFSEQ: accession NM_001384249.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 333)
  AUTHORS   Bedogni F and Hevner RF.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 333)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC104885.8.
            
            On Jun 12, 2020 this sequence version replaced XP_030104944.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR9219383.25071.1,
                                           SRR7345562.872902.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164139 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 21.34 cM"
     Protein         1..333
                     /product="transmembrane protein 44 isoform 4"
                     /calculated_mol_wt=36593
     CDS             1..333
                     /gene="Tmem44"
                     /gene_synonym="1700007N03Rik; 9330161C17Rik; B230220N21"
                     /coded_by="NM_001384249.1:449..1450"
                     /note="isoform 4 is encoded by transcript variant 6"
                     /db_xref="GeneID:224090"
                     /db_xref="MGI:MGI:1924489"
ORIGIN      
        1 mnfmftlfpv cgsksksksg qssrerrrrh lrasvfalal plslgpgwai wtaipkapap
       61 vrgpqrrllg sllqenpevf gyllgaiaaf gswasrippf snicrgksls yihlwtrfls
      121 alagllyasa ivahdrqpey llqatpwfli slgraaldla iiflscviks rmsrafrfat
      181 aearesadtq alltcaekee enqeartedk nsdwvpltsl shckplrtmt aisrymelti
      241 epaqqagcsa trlpgdgqts trdaasqepp syppiqviqa rvssssssev ssinsdlewd
      301 pedvnlerkk dgellrvqvr raslspvdla sdd
//
LOCUS       NP_001371181             360 aa            linear   ROD 31-OCT-2023
DEFINITION  transmembrane protein 44 isoform 7 [Mus musculus].
ACCESSION   NP_001371181 XP_030104941
VERSION     NP_001371181.1
DBSOURCE    REFSEQ: accession NM_001384252.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 360)
  AUTHORS   Bedogni F and Hevner RF.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 360)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC104885.8.
            
            On Jun 12, 2020 this sequence version replaced XP_030104941.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR7652917.356943.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 21.34 cM"
     Protein         1..360
                     /product="transmembrane protein 44 isoform 7"
                     /calculated_mol_wt=39472
     CDS             1..360
                     /gene="Tmem44"
                     /gene_synonym="1700007N03Rik; 9330161C17Rik; B230220N21"
                     /coded_by="NM_001384252.1:449..1531"
                     /note="isoform 7 is encoded by transcript variant 10"
                     /db_xref="GeneID:224090"
                     /db_xref="MGI:MGI:1924489"
ORIGIN      
        1 mnfmftlfpv cgsksksksg qssrerrrrh lrasvfalal plslgpgwai wtaipkapap
       61 vrgpqrrllg sllqenpevf gyllgaiaaf gswasrippf snicrgksls yihlwtrfls
      121 alagllyasa ivahdrqpey llqatpwfli slgraaldla iiflscviks rmsrafrfat
      181 aearesadtq alltcaekee enqeartedk nsdwvpltsl shckplrtmt aisrymelti
      241 epaqqagcsa trlpgdgqts trdaasqepp syppiqviqa rvssssssev ssinsdleqk
      301 ywealnseqv swpssegrig pcfchrahgs edgetlmygk slqsqlcrkf aepqtgapeg
//
LOCUS       NP_001396441             416 aa            linear   ROD 31-OCT-2023
DEFINITION  transcription factor-like 5 protein isoform 4 [Mus musculus].
ACCESSION   NP_001396441 XP_036018167
VERSION     NP_001396441.1
DBSOURCE    REFSEQ: accession NM_001409512.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 416)
  AUTHORS   Zhang FL, Feng YQ, Wang JY, Zhu KX, Wang L, Yan JM, Li XX, Wang JJ,
            Ge W, De Felici M and Shen W.
  TITLE     Single cell epigenomic and transcriptomic analysis uncovers
            potential transcription factors regulating mitotic/meiotic switch
  JOURNAL   Cell Death Dis 14 (2), 134 (2023)
   PUBMED   36797258
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 416)
  AUTHORS   Cecchini K, Biasini A, Yu T, Saflund M, Mou H, Arif A, Eghbali A,
            Colpan C, Gainetdinov I, de Rooij DG, Weng Z, Zamore PD and Ozata
            DM.
  TITLE     The transcription factor TCFL5 responds to A-MYB to elaborate the
            male meiotic program in mice
  JOURNAL   Reproduction 165 (2), 183-196 (2023)
   PUBMED   36395073
  REMARK    GeneRIF: The transcription factor TCFL5 responds to A-MYB to
            elaborate the male meiotic program in mice.
            Publication Status: Online-Only
REFERENCE   3  (residues 1 to 416)
  AUTHORS   Yu T, Biasini A, Cecchini K, Saflund M, Mou H, Arif A, Eghbali A,
            de Rooij D, Weng Z, Zamore PD and Ozata DM.
  TITLE     A-MYB/TCFL5 regulatory architecture ensures the production of
            pachytene piRNAs in placental mammals
  JOURNAL   RNA 29 (1), 30-43 (2022)
   PUBMED   36241367
  REMARK    Publication Status: Available-Online prior to print
REFERENCE   4  (residues 1 to 416)
  AUTHORS   Galan-Martinez J, Berenguer I, Del Carmen Maza M, Stamatakis K,
            Girones N and Fresno M.
  TITLE     TCFL5 deficiency impairs the pachytene to diplotene transition
            during spermatogenesis in the mouse
  JOURNAL   Sci Rep 12 (1), 10956 (2022)
   PUBMED   35768632
  REMARK    GeneRIF: TCFL5 deficiency impairs the pachytene to diplotene
            transition during spermatogenesis in the mouse.
            Publication Status: Online-Only
REFERENCE   5  (residues 1 to 416)
  AUTHORS   Xu W, Zhang Y, Qin D, Gui Y, Wang S, Du G, Yang F, Li L, Yuan S,
            Wang M and Wu X.
  TITLE     Transcription factor-like 5 is a potential DNA- and RNA-binding
            protein essential for maintaining male fertility in mice
  JOURNAL   J Cell Sci 135 (3) (2022)
   PUBMED   34931239
  REMARK    GeneRIF: Transcription factor-like 5 is a potential DNA- and
            RNA-binding protein essential for maintaining male fertility in
            mice.
REFERENCE   6  (residues 1 to 416)
  AUTHORS   Thompson CL, Ng L, Menon V, Martinez S, Lee CK, Glattfelder K,
            Sunkin SM, Henry A, Lau C, Dang C, Garcia-Lopez R, Martinez-Ferre
            A, Pombero A, Rubenstein JLR, Wakeman WB, Hohmann J, Dee N, Sodt
            AJ, Young R, Smith K, Nguyen TN, Kidney J, Kuan L, Jeromin A,
            Kaykas A, Miller J, Page D, Orta G, Bernard A, Riley Z, Smith S,
            Wohnoutka P, Hawrylycz MJ, Puelles L and Jones AR.
  TITLE     A high-resolution spatiotemporal atlas of gene expression of the
            developing mouse brain
  JOURNAL   Neuron 83 (2), 309-323 (2014)
   PUBMED   24952961
REFERENCE   7  (residues 1 to 416)
  AUTHORS   Gallardo TD, John GB, Shirley L, Contreras CM, Akbay EA, Haynie JM,
            Ward SE, Shidler MJ and Castrillon DH.
  TITLE     Genomewide discovery and classification of candidate ovarian
            fertility genes in the mouse
  JOURNAL   Genetics 177 (1), 179-194 (2007)
   PUBMED   17660561
  REMARK    GeneRIF: Transcripts highly enriched in ovary; gene identified as
            candidate female fertility factor.
REFERENCE   8  (residues 1 to 416)
  AUTHORS   Ballow D, Meistrich ML, Matzuk M and Rajkovic A.
  TITLE     Sohlh1 is essential for spermatogonial differentiation
  JOURNAL   Dev Biol 294 (1), 161-167 (2006)
   PUBMED   16564520
REFERENCE   9  (residues 1 to 416)
  AUTHORS   Willnow T, Antignac C, Brandli A, Christensen E, Cox R, Davidson D,
            Davies J, Devuyst O, Eichele G, Hastie N, Verroust P, Schedl A and
            Meij I.
  TITLE     The European renal genome project: an integrated approach towards
            understanding the genetics of kidney development and disease
  JOURNAL   Organogenesis 2 (2), 42-47 (2005)
   PUBMED   19521566
REFERENCE   10 (residues 1 to 416)
  AUTHORS   Siep M, Sleddens-Linkels E, Mulders S, van Eenennaam H, Wassenaar
            E, Van Cappellen WA, Hoogerbrugge J, Grootegoed JA and Baarends WM.
  TITLE     Basic helix-loop-helix transcription factor Tcfl5 interacts with
            the Calmegin gene promoter in mouse spermatogenesis
  JOURNAL   Nucleic Acids Res 32 (21), 6425-6436 (2004)
   PUBMED   15585666
  REMARK    GeneRIF: Tcfl5 is a testis-specific transcription factor that
            interacts with the calmegin gene promoter during spermatogenesis.
            Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL732560.11 and AL669926.6.
            
            On Jul 19, 2022 this sequence version replaced XP_036018167.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN01164142
                              [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 103.16 cM"
     Protein         1..416
                     /product="transcription factor-like 5 protein isoform 4"
                     /note="FIG beta; factor in the germline beta;
                     spermatogenesis- and oogenesis-specific bHLH-containing
                     protein 1"
                     /calculated_mol_wt=43442
     Region          390..>408
                     /region_name="bHLH_SF"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     cl00081"
                     /db_xref="CDD:469605"
     CDS             1..416
                     /gene="Tcfl5"
                     /gene_synonym="Figlb; Sosf1"
                     /coded_by="NM_001409512.1:159..1409"
                     /note="isoform 4 is encoded by transcript variant 4"
                     /db_xref="GeneID:277353"
                     /db_xref="MGI:MGI:2672878"
ORIGIN      
        1 msgpgprepp peagatggea gpegagggda algepglsft ttdlslvemt eveytqlqhi
       61 lyshmeaadg elearlgsal lagpgagsga agslapappv ypvlcpplaa dapclghvdf
      121 qelrmmllge agaaektpgg adgtrtradg vakegaggag pdgapearak ptvrvrledr
      181 fnsmpaeppa prgaepaesg valnnlvtli rhpselmnvp lhqqqnkctt lvknktaaat
      241 talqftyplf tsacstggna slaqtqsssn scsileaakh qdiglprafs fcyqqeiest
      301 kqtggsrnka lpeqvwikvg eealckqain krnrsrirql dtsverralg eiqnvgegss
      361 tsqgtwqsse ssqsnlgeqt qsgpqggrsq rrerhnrmer drrnlracfa vklaeg
//
LOCUS       NP_001020022             495 aa            linear   ROD 31-OCT-2023
DEFINITION  ankyrin repeat domain-containing protein 34A [Mus musculus].
ACCESSION   NP_001020022 XP_619938 XP_623038
VERSION     NP_001020022.2
DBSOURCE    REFSEQ: accession NM_001024851.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 495)
  AUTHORS   Bedogni F and Hevner RF.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 495)
  AUTHORS   Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, Magen
            A, Canidio E, Pagani M, Peluso I, Lin-Marq N, Koch M, Bilio M,
            Cantiello I, Verde R, De Masi C, Bianchi SA, Cicchini J, Perroud E,
            Mehmeti S, Dagand E, Schrinner S, Nurnberger A, Schmidt K, Metz K,
            Zwingmann C, Brieske N, Springer C, Hernandez AM, Herzog S, Grabbe
            F, Sieverding C, Fischer B, Schrader K, Brockmeyer M, Dettmer S,
            Helbig C, Alunni V, Battaini MA, Mura C, Henrichsen CN,
            Garcia-Lopez R, Echevarria D, Puelles E, Garcia-Calero E, Kruse S,
            Uhr M, Kauck C, Feng G, Milyaev N, Ong CK, Kumar L, Lam M, Semple
            CA, Gyenesei A, Mundlos S, Radelof U, Lehrach H, Sarmientos P,
            Reymond A, Davidson DR, Dolle P, Antonarakis SE, Yaspo ML, Martinez
            S, Baldock RA, Eichele G and Ballabio A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC122037.2.
            
            On Jan 5, 2007 this sequence version replaced NP_001020022.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC052924.1, SRR17784644.1095310.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 41.93 cM"
     Protein         1..495
                     /product="ankyrin repeat domain-containing protein 34A"
                     /note="ankyrin repeat domain 34"
                     /calculated_mol_wt=52319
     Region          <8..>133
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          8..35
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(10..11,14..16,18..19,23,26,35,37,39,43..44,47..49,
                     51..52,62,65,74,76,78,83..84,87..89,91..92,96,99,108)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          37..74
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          76..108
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          110..136
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..495
                     /gene="Ankrd34a"
                     /gene_synonym="Ankrd34"
                     /coded_by="NM_001024851.4:324..1811"
                     /db_xref="CCDS:CCDS38556.1"
                     /db_xref="GeneID:545554"
                     /db_xref="MGI:MGI:3617846"
ORIGIN      
        1 mlhteghall ravgqgklrl arllleggay vnegdaqget almaacrary ddpqnkarmv
       61 rylleqgadp niadrlgrta lmhacagggg aavaslllah gadpsvrdha gasalvhald
      121 rgdretlatl ldackakgte viiittdtsp sgtkktrqyl nsppspgved papappspgv
      181 ctspsevqlq tagggrglls praqeeeekr difefplpkp pddpspsepl pkpprhppkp
      241 lkrlnsepwg lvappqpvpp aegrpglerl aaefngltlt grprlsrrhs tegpedpppw
      301 aekvtgggpl srrntapeaq esglpsglrq klsrmepvel dtpghfcpds pessrlsler
      361 rrysaspltl ppagsvsspr qsqeslpgav splsgrrrsp gllerrgsgt llldhisqtr
      421 pgflpplnvs phppipdirp qpggrapslp apppsgapgs prtkrklvrr hsmqteqirl
      481 lggfqslggp gepgr
//
LOCUS       NP_001239437              83 aa            linear   ROD 31-OCT-2023
DEFINITION  uncharacterized protein C14orf132 homolog [Mus musculus].
ACCESSION   NP_001239437
VERSION     NP_001239437.1
DBSOURCE    REFSEQ: accession NM_001252508.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 83)
  AUTHORS   Bedogni F and Hevner RF.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 83)
  AUTHORS   Piao Y, Ko NT, Lim MK and Ko MS.
  TITLE     Construction of long-transcript enriched cDNA libraries from
            submicrogram amounts of total RNAs by a universal PCR amplification
            method
  JOURNAL   Genome Res 11 (9), 1553-1558 (2001)
   PUBMED   11544199
REFERENCE   3  (residues 1 to 83)
  AUTHORS   Kagami Y and Furuichi T.
  TITLE     Investigation of differentially expressed genes during the
            development of mouse cerebellum
  JOURNAL   Brain Res Gene Expr Patterns 1 (1), 39-59 (2001)
   PUBMED   15018818
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK052429.1, AK081193.1 and BC058677.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK052429.1, SRR1660813.202855.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..83
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="12"
                     /map="12 55.61 cM"
     Protein         1..83
                     /product="uncharacterized protein C14orf132 homolog"
                     /calculated_mol_wt=8760
     CDS             1..83
                     /gene="D430019H16Rik"
                     /coded_by="NM_001252508.1:269..520"
                     /db_xref="CCDS:CCDS56861.1"
                     /db_xref="GeneID:268595"
                     /db_xref="MGI:MGI:2443127"
ORIGIN      
        1 mdlsfmaaql pmmggafmds snedfsteys lfnspgnvhs tsnghgqpee sprssndavl
       61 lwiaiiatlg nivvvgvvya ftf
//
LOCUS       NP_001344343             460 aa            linear   ROD 31-OCT-2023
DEFINITION  transmembrane protein 44 isoform 1 [Mus musculus].
ACCESSION   NP_001344343 XP_006522122
VERSION     NP_001344343.1
DBSOURCE    REFSEQ: accession NM_001357414.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 460)
  AUTHORS   Bedogni F and Hevner RF.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 460)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC104885.8.
            
            On Oct 27, 2017 this sequence version replaced XP_006522122.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR1660815.163816.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 21.34 cM"
     Protein         1..460
                     /product="transmembrane protein 44 isoform 1"
                     /calculated_mol_wt=50515
     CDS             1..460
                     /gene="Tmem44"
                     /gene_synonym="1700007N03Rik; 9330161C17Rik; B230220N21"
                     /coded_by="NM_001357414.1:80..1462"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /db_xref="GeneID:224090"
                     /db_xref="MGI:MGI:1924489"
ORIGIN      
        1 meegasaapp llnwdylerc farrrvcisf glwicaaccw iaahtlilyl rctkkcsqdq
       61 stlcaafcll tslcdtvgai larqltiqvf tgaylaavdf mnfmftlfpv cgsksksksg
      121 qssrerrrrh lrasvfalal plslgpgwai wtaipkapap vrgpqrrllg sllqenpevf
      181 gyllgaiaaf gswasrippf snicrgksls yihlwtrfls alagllyasa ivahdrqpey
      241 llqatpwfli slgraaldla iiflscviks rmsrafrfat aearesadtq alltcaekee
      301 enqeartedk nsdwvpltsl shckplrtmt aisrymelti epaqqagcsa trlpgdgqts
      361 trdaasqepp syppiqviqa rvssssssev ssinsdleqk ywealnseqv swpssegrig
      421 pcfchrahgs edgetlmygk slqsqlcrkf aepqtgapeg
//
LOCUS       NP_766202                433 aa            linear   ROD 31-OCT-2023
DEFINITION  transmembrane protein 44 isoform 2 [Mus musculus].
ACCESSION   NP_766202
VERSION     NP_766202.3
DBSOURCE    REFSEQ: accession NM_172614.3
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 433)
  AUTHORS   Bedogni F and Hevner RF.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 433)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK048655.1 and AC104885.8.
            
            On May 24, 2006 this sequence version replaced NP_766202.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK048655.1, SRR9219379.15116.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164139 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 21.34 cM"
     Protein         1..433
                     /product="transmembrane protein 44 isoform 2"
                     /calculated_mol_wt=47636
     CDS             1..433
                     /gene="Tmem44"
                     /gene_synonym="1700007N03Rik; 9330161C17Rik; B230220N21"
                     /coded_by="NM_172614.3:80..1381"
                     /note="isoform 2 is encoded by transcript variant 2"
                     /db_xref="CCDS:CCDS37310.1"
                     /db_xref="GeneID:224090"
                     /db_xref="MGI:MGI:1924489"
ORIGIN      
        1 meegasaapp llnwdylerc farrrvcisf glwicaaccw iaahtlilyl rctkkcsqdq
       61 stlcaafcll tslcdtvgai larqltiqvf tgaylaavdf mnfmftlfpv cgsksksksg
      121 qssrerrrrh lrasvfalal plslgpgwai wtaipkapap vrgpqrrllg sllqenpevf
      181 gyllgaiaaf gswasrippf snicrgksls yihlwtrfls alagllyasa ivahdrqpey
      241 llqatpwfli slgraaldla iiflscviks rmsrafrfat aearesadtq alltcaekee
      301 enqeartedk nsdwvpltsl shckplrtmt aisrymelti epaqqagcsa trlpgdgqts
      361 trdaasqepp syppiqviqa rvssssssev ssinsdlewd pedvnlerkk dgellrvqvr
      421 raslspvdla sdd
//
LOCUS       NP_033594                480 aa            linear   ROD 31-OCT-2023
DEFINITION  zinc finger protein 45 isoform 2 [Mus musculus].
ACCESSION   NP_033594
VERSION     NP_033594.1
DBSOURCE    REFSEQ: accession NM_009568.3
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 480)
  AUTHORS   Bedogni F and Hevner RF.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 480)
  AUTHORS   Yokoyama S, Ito Y, Ueno-Kudoh H, Shimizu H, Uchibe K, Albini S,
            Mitsuoka K, Miyaki S, Kiso M, Nagai A, Hikata T, Osada T, Fukuda N,
            Yamashita S, Harada D, Mezzano V, Kasai M, Puri PL, Hayashizaki Y,
            Okado H, Hashimoto M and Asahara H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
REFERENCE   3  (residues 1 to 480)
  AUTHORS   Weissig H, Narisawa S, Sikstrom C, Olsson PG, McCarrey JR, Tsonis
            PA, Del Rio-Tsonis K and Millan JL.
  TITLE     Three novel spermatogenesis-specific zinc finger genes
  JOURNAL   FEBS Lett 547 (1-3), 61-68 (2003)
   PUBMED   12860387
  REMARK    GeneRIF: cloning and characterization of its expression during
            spermatogenesis
REFERENCE   4  (residues 1 to 480)
  AUTHORS   Shannon M and Stubbs L.
  TITLE     Analysis of homologous XRCC1-linked zinc-finger gene families in
            human and mouse: evidence for orthologous genes
  JOURNAL   Genomics 49 (1), 112-121 (1998)
   PUBMED   9570955
REFERENCE   5  (residues 1 to 480)
  AUTHORS   Stubbs L, Carver EA, Shannon ME, Kim J, Geisler J, Generoso EE,
            Stanford BG, Dunn WC, Mohrenweiser H, Zimmermann W, Watt SM and
            Ashworth LK.
  TITLE     Detailed comparative map of human chromosome 19q and related
            regions of the mouse genome
  JOURNAL   Genomics 35 (3), 499-508 (1996)
   PUBMED   8812484
REFERENCE   6  (residues 1 to 480)
  AUTHORS   Shannon M, Ashworth LK, Mucenski ML, Lamerdin JE, Branscomb E and
            Stubbs L.
  TITLE     Comparative analysis of a conserved zinc finger gene cluster on
            human chromosome 19q and mouse chromosome 7
  JOURNAL   Genomics 33 (1), 112-120 (1996)
   PUBMED   8617494
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC159140.10 and CJ174209.1.
            
            Transcript Variant: This variant (2) lacks an alternate exon which
            results in the use of a downstream, in-frame, start codon, compared
            to variant 1. The resulting protein (isoform 2) has a shorter
            N-terminus when it is compared to isoform 1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC005437.1, U46187.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164135, SAMN01164141
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 10.27 cM"
     Protein         1..480
                     /product="zinc finger protein 45 isoform 2"
                     /calculated_mol_wt=54704
     Region          1..42
                     /region_name="KRAB"
                     /note="KRAB box; pfam01352"
                     /db_xref="CDD:460171"
     Region          159..179
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          172..196
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          187..207
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          215..235
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <220..419
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          243..263
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(248,250,252,254..255,258..259,262,276,278,282..283,
                     286..287,290,304,306,308,310..311,314..315,318)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          271..291
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          299..319
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          327..347
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          355..375
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          383..403
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(388,390,392,394..395,398..399,402,416,418,422..423,
                     426..427,430,444,446,448,450..451,454..455,458)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          411..431
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          423..447
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          439..459
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..480
                     /gene="Zfp94"
                     /coded_by="NM_009568.3:328..1770"
                     /note="isoform 2 is encoded by transcript variant 2"
                     /db_xref="CCDS:CCDS20945.1"
                     /db_xref="GeneID:22756"
                     /db_xref="MGI:MGI:107610"
ORIGIN      
        1 mvtfrdvavv fseeelglld aaqrklyhdv mlenfrmlls vgdknpeeme sleevglrhl
       61 shealfcsqi wqqvsrdlmk agdcrvsire tgsplkrdda hgadrkyskh sgqkpwlqlh
      121 cgtdggeepy reersekdsw dsplqangrp pagekryrce kcdhafcrls glqahqvrht
      181 gekpykceec gkgftrastl ldhqrghtgn kpyqchacwk sfchssefnn hirvhtgekp
      241 yvceecgkgf sqashllahq rghtgekpyk cstcgkgfsr ssdlnvhcri htgekpykce
      301 tcgkafsrvs ilqvhqrvhs edkpyqcaec grgftveshl qahqrshtge rpyqceecgr
      361 gfcrasnfla hrgvhtgekp yrcdicgkrf rqrsylhdhh rihtgekpyk ceecgkvfsw
      421 ssylkahqrv htgekpyrce ecgkgfswss sllihqraha edegrkdlpa segsqgkqtl
//
LOCUS       NP_001350738            1095 aa            linear   ROD 31-OCT-2023
DEFINITION  neurabin-1 isoform 1 [Mus musculus].
ACCESSION   NP_001350738 XP_006505142
VERSION     NP_001350738.1
DBSOURCE    REFSEQ: accession NM_001363809.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 1095)
  AUTHORS   Salamon I, Park Y, Miskic T, Kopic J, Matteson P, Page NF, Roque A,
            McAuliffe GW, Favate J, Garcia-Forn M, Shah P, Judas M, Millonig
            JH, Kostovic I, De Rubeis S, Hart RP, Krsnik Z and Rasin MR.
  TITLE     Celf4 controls mRNA translation underlying synaptic development in
            the prenatal mammalian neocortex
  JOURNAL   Nat Commun 14 (1), 6025 (2023)
   PUBMED   37758766
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 1095)
  AUTHORS   Edler,M.C., Salek,A.B., Watkins,D.S., Kaur,H., Morris,C.W.,
            Yamamoto,B.K. and Baucum,A.J. 2nd.
  TITLE     Mechanisms Regulating the Association of Protein Phosphatase 1 with
            Spinophilin and Neurabin
  JOURNAL   ACS Chem Neurosci 9 (11), 2701-2712 (2018)
   PUBMED   29786422
REFERENCE   3  (residues 1 to 1095)
  AUTHORS   Wu H, Cottingham C, Chen L, Wang H, Che P, Liu K and Wang Q.
  TITLE     Age-dependent differential regulation of anxiety- and
            depression-related behaviors by neurabin and spinophilin
  JOURNAL   PLoS One 12 (7), e0180638 (2017)
   PUBMED   28700667
  REMARK    GeneRIF: two homologs neurabin and spinophilin play important yet
            distinct roles in the regulation of anxiety- and depression-like
            behaviors in an age-dependent manner.
            Publication Status: Online-Only
REFERENCE   4  (residues 1 to 1095)
  AUTHORS   Che P, Chen Y, Lu R, Peng N, Gannon M, Wyss JM, Jiao K and Wang Q.
  TITLE     Spinophilin Is Indispensable for the alpha2B Adrenergic
            Receptor-Elicited Hypertensive Response
  JOURNAL   PLoS One 10 (8), e0135030 (2015)
   PUBMED   26244553
  REMARK    GeneRIF: Data indicate that In arrestin 3 deficient mice, where the
            alpha2B adrenergic receptor has a stronger binding to spinophilin,
            the hypertensive response is enhanced.
            Publication Status: Online-Only
REFERENCE   5  (residues 1 to 1095)
  AUTHORS   Chen Y, Liu Y, Cottingham C, McMahon L, Jiao K, Greengard P and
            Wang Q.
  TITLE     Neurabin scaffolding of adenosine receptor and RGS4 regulates
            anti-seizure effect of endogenous adenosine
  JOURNAL   J Neurosci 32 (8), 2683-2695 (2012)
   PUBMED   22357852
REFERENCE   6  (residues 1 to 1095)
  AUTHORS   Orioli D, Colaluca IN, Stefanini M, Riva S, Dotti CG and Peverali
            FA.
  TITLE     Rac3-induced neuritogenesis requires binding to Neurabin I
  JOURNAL   Mol Biol Cell 17 (5), 2391-2400 (2006)
   PUBMED   16525025
  REMARK    GeneRIF: Neurabin I mediates Rac3-induced neuritogenesis, possibly
            by anchoring Rac3 to growth cone F-actin.
REFERENCE   7  (residues 1 to 1095)
  AUTHORS   Ono R, Nakamura K, Inoue K, Naruse M, Usami T, Wakisaka-Saito N,
            Hino T, Suzuki-Migishima R, Ogonuki N, Miki H, Kohda T, Ogura A,
            Yokoyama M, Kaneko-Ishino T and Ishino F.
  TITLE     Deletion of Peg10, an imprinted gene acquired from a
            retrotransposon, causes early embryonic lethality
  JOURNAL   Nat Genet 38 (1), 101-106 (2006)
   PUBMED   16341224
REFERENCE   8  (residues 1 to 1095)
  AUTHORS   Ryan XP, Alldritt J, Svenningsson P, Allen PB, Wu GY, Nairn AC and
            Greengard P.
  TITLE     The Rho-specific GEF Lfc interacts with neurabin and spinophilin to
            regulate dendritic spine morphology
  JOURNAL   Neuron 47 (1), 85-100 (2005)
   PUBMED   15996550
REFERENCE   9  (residues 1 to 1095)
  AUTHORS   Carmody LC, Bauman PA, Bass MA, Mavila N, DePaoli-Roach AA and
            Colbran RJ.
  TITLE     A protein phosphatase-1gamma1 isoform selectivity determinant in
            dendritic spine-associated neurabin
  JOURNAL   J Biol Chem 279 (21), 21714-21723 (2004)
   PUBMED   15016827
  REMARK    GeneRIF: there is a novel PP1gamma1-selective interaction domain in
            neurabin that may allow for selective regulation and/or subcellular
            targeting of PP1 isoforms
REFERENCE   10 (residues 1 to 1095)
  AUTHORS   Ono R, Shiura H, Aburatani H, Kohda T, Kaneko-Ishino T and Ishino
            F.
  TITLE     Identification of a large novel imprinted gene cluster on mouse
            proximal chromosome 6
  JOURNAL   Genome Res 13 (7), 1696-1705 (2003)
   PUBMED   12840045
  REMARK    GeneRIF: Ppp1r9a gene, found in a cluster of imprinted genes on
            chromosome 6, is preferentially expressed from the maternal allele
            at embryonic stages, but biallelically expressed in neonatal
            tissues.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC068500.4 and AC074225.4.
            
            On Jun 3, 2018 this sequence version replaced XP_006505142.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK138313.1, SRR7652917.688881.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN01164131
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            imprinted gene :: PMID: 12840045
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1095
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 1.86 cM"
     Protein         1..1095
                     /product="neurabin-1 isoform 1"
                     /note="neural tissue-specific F-actin binding protein;
                     protein phosphatase 1, regulatory (inhibitor) subunit 9A;
                     neurabin-1"
                     /calculated_mol_wt=122824
     Region          435..498
                     /region_name="PDZ_5"
                     /note="PDZ domain; pfam17817"
                     /db_xref="CDD:465518"
     Region          502..591
                     /region_name="PDZ_neurabin-like"
                     /note="PDZ domain of neurabin-1 and neurabin-2, and
                     related domains; cd06790"
                     /db_xref="CDD:467252"
     Site            order(514..520,538,541,571,575,578..579)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467252"
     Region          671..>824
                     /region_name="DR0291"
                     /note="Predicted nucleic acid-binding protein DR0291,
                     contains C4-type Zn-ribbon domain [General function
                     prediction only]; COG1579"
                     /db_xref="CDD:441187"
     Region          983..1052
                     /region_name="SAM_Neurabin-like"
                     /note="SAM domain of SAM_Neurabin-like subfamily; cd09512"
                     /db_xref="CDD:188911"
     CDS             1..1095
                     /gene="Ppp1r9a"
                     /gene_synonym="2810430P21Rik; 4930518N04Rik; 5330407E15;
                     A230094E16Rik; neurabin-I; NRB"
                     /coded_by="NM_001363809.1:279..3566"
                     /note="isoform 1 is encoded by transcript variant 2"
                     /db_xref="CCDS:CCDS19897.1"
                     /db_xref="GeneID:243725"
                     /db_xref="MGI:MGI:2442401"
ORIGIN      
        1 mlkaessger ttlrsasphr nayrtefqal kstfdkpksd geqktkegeg sqqsrgrkyg
       61 snvnriknlf mqmgmepsen aaiiaktrgk grpsspqrrm kpkefvektd gsvvklessv
      121 serisrfdtm hdgpsyakft etrkmfersv hesgqnhrys pkkekgggte pqdewggsks
      181 nrgssdslds lsprteavsp tvsqlsavfe nseppgalts gkaesadysv tghyplnlps
      241 vtvtnldtfg rlkdsnskpp snkqdtdted aqksdavpvp evaqkgtsla slpseesqls
      301 teaedvttaq pealdstdkd speepsaenq ampkshilsp rnepledaea nvvgseraqh
      361 qkkdltggdl tspdasassc grevpedsns fesshvymhs dynvyrvrsr ynsdwgetgt
      421 eqdeeedsde nnyyqpdmey seivglpeee eipanrkikf scapikvfnt ysnedydrrn
      481 ddvdpvaasa eyelekrvek lelfpvelek dedglgisii gmgvgadagl eklgifvktv
      541 tdggaaqrdg riqvndqive vdgislvgvt qnfaatvlrn tkgnvrfvig rekpgqvsev
      601 aqlisqtleq errqreller hyaqydaddd etgeyatdee edeggpilps gdvaievfel
      661 penedmfsps dldtsklshk fkelqikhav teaeiqklkt klqaaenekv rweleknqlq
      721 qnieenkerm lklesywiea qtlchtvneh lketqsqyqa lekkynkakk likdfqqkel
      781 dfikrqever kkreevekah llevqglqvr irdleaevfr llkqngtqvn nnnniferrp
      841 spgevskgdt menvevkqts cqdglsqdln eavpeterld skalktraql svknrrqrpt
      901 rtrlydsvss tdgedslerk nftfnddfsp sstssadlsg lgaepktpgl sqslalssde
      961 sldmiddeil ddgqspkhtq sqnravhews vqqvshwlms lsldqyvpef saqsisgeql
     1021 lqldgnklka lgmtssqdra lvkkklkemk mslekarkaq ekmekqrekl rrkeqeqmqr
     1081 kskksekmts tadqp
//
LOCUS       NP_001388425            1322 aa            linear   ROD 31-OCT-2023
DEFINITION  neurabin-1 isoform 2 [Mus musculus].
ACCESSION   NP_001388425 XP_006505134
VERSION     NP_001388425.1
DBSOURCE    REFSEQ: accession NM_001401496.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 1322)
  AUTHORS   Salamon I, Park Y, Miskic T, Kopic J, Matteson P, Page NF, Roque A,
            McAuliffe GW, Favate J, Garcia-Forn M, Shah P, Judas M, Millonig
            JH, Kostovic I, De Rubeis S, Hart RP, Krsnik Z and Rasin MR.
  TITLE     Celf4 controls mRNA translation underlying synaptic development in
            the prenatal mammalian neocortex
  JOURNAL   Nat Commun 14 (1), 6025 (2023)
   PUBMED   37758766
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 1322)
  AUTHORS   Edler,M.C., Salek,A.B., Watkins,D.S., Kaur,H., Morris,C.W.,
            Yamamoto,B.K. and Baucum,A.J. 2nd.
  TITLE     Mechanisms Regulating the Association of Protein Phosphatase 1 with
            Spinophilin and Neurabin
  JOURNAL   ACS Chem Neurosci 9 (11), 2701-2712 (2018)
   PUBMED   29786422
REFERENCE   3  (residues 1 to 1322)
  AUTHORS   Wu H, Cottingham C, Chen L, Wang H, Che P, Liu K and Wang Q.
  TITLE     Age-dependent differential regulation of anxiety- and
            depression-related behaviors by neurabin and spinophilin
  JOURNAL   PLoS One 12 (7), e0180638 (2017)
   PUBMED   28700667
  REMARK    GeneRIF: two homologs neurabin and spinophilin play important yet
            distinct roles in the regulation of anxiety- and depression-like
            behaviors in an age-dependent manner.
            Publication Status: Online-Only
REFERENCE   4  (residues 1 to 1322)
  AUTHORS   Che P, Chen Y, Lu R, Peng N, Gannon M, Wyss JM, Jiao K and Wang Q.
  TITLE     Spinophilin Is Indispensable for the alpha2B Adrenergic
            Receptor-Elicited Hypertensive Response
  JOURNAL   PLoS One 10 (8), e0135030 (2015)
   PUBMED   26244553
  REMARK    GeneRIF: Data indicate that In arrestin 3 deficient mice, where the
            alpha2B adrenergic receptor has a stronger binding to spinophilin,
            the hypertensive response is enhanced.
            Publication Status: Online-Only
REFERENCE   5  (residues 1 to 1322)
  AUTHORS   Chen Y, Liu Y, Cottingham C, McMahon L, Jiao K, Greengard P and
            Wang Q.
  TITLE     Neurabin scaffolding of adenosine receptor and RGS4 regulates
            anti-seizure effect of endogenous adenosine
  JOURNAL   J Neurosci 32 (8), 2683-2695 (2012)
   PUBMED   22357852
REFERENCE   6  (residues 1 to 1322)
  AUTHORS   Orioli D, Colaluca IN, Stefanini M, Riva S, Dotti CG and Peverali
            FA.
  TITLE     Rac3-induced neuritogenesis requires binding to Neurabin I
  JOURNAL   Mol Biol Cell 17 (5), 2391-2400 (2006)
   PUBMED   16525025
  REMARK    GeneRIF: Neurabin I mediates Rac3-induced neuritogenesis, possibly
            by anchoring Rac3 to growth cone F-actin.
REFERENCE   7  (residues 1 to 1322)
  AUTHORS   Ono R, Nakamura K, Inoue K, Naruse M, Usami T, Wakisaka-Saito N,
            Hino T, Suzuki-Migishima R, Ogonuki N, Miki H, Kohda T, Ogura A,
            Yokoyama M, Kaneko-Ishino T and Ishino F.
  TITLE     Deletion of Peg10, an imprinted gene acquired from a
            retrotransposon, causes early embryonic lethality
  JOURNAL   Nat Genet 38 (1), 101-106 (2006)
   PUBMED   16341224
REFERENCE   8  (residues 1 to 1322)
  AUTHORS   Ryan XP, Alldritt J, Svenningsson P, Allen PB, Wu GY, Nairn AC and
            Greengard P.
  TITLE     The Rho-specific GEF Lfc interacts with neurabin and spinophilin to
            regulate dendritic spine morphology
  JOURNAL   Neuron 47 (1), 85-100 (2005)
   PUBMED   15996550
REFERENCE   9  (residues 1 to 1322)
  AUTHORS   Carmody LC, Bauman PA, Bass MA, Mavila N, DePaoli-Roach AA and
            Colbran RJ.
  TITLE     A protein phosphatase-1gamma1 isoform selectivity determinant in
            dendritic spine-associated neurabin
  JOURNAL   J Biol Chem 279 (21), 21714-21723 (2004)
   PUBMED   15016827
  REMARK    GeneRIF: there is a novel PP1gamma1-selective interaction domain in
            neurabin that may allow for selective regulation and/or subcellular
            targeting of PP1 isoforms
REFERENCE   10 (residues 1 to 1322)
  AUTHORS   Ono R, Shiura H, Aburatani H, Kohda T, Kaneko-Ishino T and Ishino
            F.
  TITLE     Identification of a large novel imprinted gene cluster on mouse
            proximal chromosome 6
  JOURNAL   Genome Res 13 (7), 1696-1705 (2003)
   PUBMED   12840045
  REMARK    GeneRIF: Ppp1r9a gene, found in a cluster of imprinted genes on
            chromosome 6, is preferentially expressed from the maternal allele
            at embryonic stages, but biallelically expressed in neonatal
            tissues.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC068500.4 and AC074225.4.
            
            On Feb 14, 2022 this sequence version replaced XP_006505134.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR11927935.2585122.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN00849390
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            imprinted gene         :: PMID: 12840045
            RefSeq Select criteria :: based on manual assertion, conservation,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1322
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 1.86 cM"
     Protein         1..1322
                     /product="neurabin-1 isoform 2"
                     /note="neural tissue-specific F-actin binding protein;
                     protein phosphatase 1, regulatory (inhibitor) subunit 9A;
                     neurabin-1"
                     /calculated_mol_wt=147578
     Region          435..498
                     /region_name="PDZ_5"
                     /note="PDZ domain; pfam17817"
                     /db_xref="CDD:465518"
     Region          502..591
                     /region_name="PDZ_neurabin-like"
                     /note="PDZ domain of neurabin-1 and neurabin-2, and
                     related domains; cd06790"
                     /db_xref="CDD:467252"
     Site            order(514..520,538,541,571,575,578..579)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467252"
     Region          693..>846
                     /region_name="DR0291"
                     /note="Predicted nucleic acid-binding protein DR0291,
                     contains C4-type Zn-ribbon domain [General function
                     prediction only]; COG1579"
                     /db_xref="CDD:441187"
     Region          1210..1279
                     /region_name="SAM_Neurabin-like"
                     /note="SAM domain of SAM_Neurabin-like subfamily; cd09512"
                     /db_xref="CDD:188911"
     CDS             1..1322
                     /gene="Ppp1r9a"
                     /gene_synonym="2810430P21Rik; 4930518N04Rik; 5330407E15;
                     A230094E16Rik; neurabin-I; NRB"
                     /coded_by="NM_001401496.1:279..4247"
                     /note="isoform 2 is encoded by transcript variant 4"
                     /db_xref="GeneID:243725"
                     /db_xref="MGI:MGI:2442401"
ORIGIN      
        1 mlkaessger ttlrsasphr nayrtefqal kstfdkpksd geqktkegeg sqqsrgrkyg
       61 snvnriknlf mqmgmepsen aaiiaktrgk grpsspqrrm kpkefvektd gsvvklessv
      121 serisrfdtm hdgpsyakft etrkmfersv hesgqnhrys pkkekgggte pqdewggsks
      181 nrgssdslds lsprteavsp tvsqlsavfe nseppgalts gkaesadysv tghyplnlps
      241 vtvtnldtfg rlkdsnskpp snkqdtdted aqksdavpvp evaqkgtsla slpseesqls
      301 teaedvttaq pealdstdkd speepsaenq ampkshilsp rnepledaea nvvgseraqh
      361 qkkdltggdl tspdasassc grevpedsns fesshvymhs dynvyrvrsr ynsdwgetgt
      421 eqdeeedsde nnyyqpdmey seivglpeee eipanrkikf scapikvfnt ysnedydrrn
      481 ddvdpvaasa eyelekrvek lelfpvelek dedglgisii gmgvgadagl eklgifvktv
      541 tdggaaqrdg riqvndqive vdgislvgvt qnfaatvlrn tkgnvrfvig rekpgqvsev
      601 aqlisqtleq errqreller hyaqydaddd entvaelqgv sgncnnnnnr flktgeyatd
      661 eeedeggpil psgdvaievf elpenedmfs psdldtskls hkfkelqikh avteaeiqkl
      721 ktklqaaene kvrweleknq lqqnieenke rmlklesywi eaqtlchtvn ehlketqsqy
      781 qalekkynka kklikdfqqk eldfikrqev erkkreevek ahllevqglq vrirdleaev
      841 frllkqngtq vnnnnnifer rpspgevskg dtmenvevkq tscqdglsqd lneavpeter
      901 ldskalktra qlsvknrrqr ptrtrlydsv sstdgedsle rkawrvsspe secgvtlltp
      961 vtsprafssh httespggsq hpegdpfssi sgdtssssts asdhdtedsp cchqatekal
     1021 qekdddkypk slrtsssfvv qrgkikqkfa dlgaplrrnp nkgkkrkdke keasrfsags
     1081 rifrsklenw kskpssaaqa strspcmpfs wfnesrkgsy sfrnlpsaps plqpspetqv
     1141 sdktgsknft fnddfspsst ssadlsglga epktpglsqs lalssdesld middeilddg
     1201 qspkhtqsqn ravhewsvqq vshwlmslsl dqyvpefsaq sisgeqllql dgnklkalgm
     1261 tssqdralvk kklkemkmsl ekarkaqekm ekqreklrrk eqeqmqrksk ksekmtstad
     1321 qp
//
LOCUS       NP_001396440             273 aa            linear   ROD 31-OCT-2023
DEFINITION  transcription factor-like 5 protein isoform 6 [Mus musculus].
ACCESSION   NP_001396440
VERSION     NP_001396440.1
DBSOURCE    REFSEQ: accession NM_001409511.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 273)
  AUTHORS   Zhang FL, Feng YQ, Wang JY, Zhu KX, Wang L, Yan JM, Li XX, Wang JJ,
            Ge W, De Felici M and Shen W.
  TITLE     Single cell epigenomic and transcriptomic analysis uncovers
            potential transcription factors regulating mitotic/meiotic switch
  JOURNAL   Cell Death Dis 14 (2), 134 (2023)
   PUBMED   36797258
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 273)
  AUTHORS   Cecchini K, Biasini A, Yu T, Saflund M, Mou H, Arif A, Eghbali A,
            Colpan C, Gainetdinov I, de Rooij DG, Weng Z, Zamore PD and Ozata
            DM.
  TITLE     The transcription factor TCFL5 responds to A-MYB to elaborate the
            male meiotic program in mice
  JOURNAL   Reproduction 165 (2), 183-196 (2023)
   PUBMED   36395073
  REMARK    GeneRIF: The transcription factor TCFL5 responds to A-MYB to
            elaborate the male meiotic program in mice.
            Publication Status: Online-Only
REFERENCE   3  (residues 1 to 273)
  AUTHORS   Yu T, Biasini A, Cecchini K, Saflund M, Mou H, Arif A, Eghbali A,
            de Rooij D, Weng Z, Zamore PD and Ozata DM.
  TITLE     A-MYB/TCFL5 regulatory architecture ensures the production of
            pachytene piRNAs in placental mammals
  JOURNAL   RNA 29 (1), 30-43 (2022)
   PUBMED   36241367
  REMARK    Publication Status: Available-Online prior to print
REFERENCE   4  (residues 1 to 273)
  AUTHORS   Galan-Martinez J, Berenguer I, Del Carmen Maza M, Stamatakis K,
            Girones N and Fresno M.
  TITLE     TCFL5 deficiency impairs the pachytene to diplotene transition
            during spermatogenesis in the mouse
  JOURNAL   Sci Rep 12 (1), 10956 (2022)
   PUBMED   35768632
  REMARK    GeneRIF: TCFL5 deficiency impairs the pachytene to diplotene
            transition during spermatogenesis in the mouse.
            Publication Status: Online-Only
REFERENCE   5  (residues 1 to 273)
  AUTHORS   Xu W, Zhang Y, Qin D, Gui Y, Wang S, Du G, Yang F, Li L, Yuan S,
            Wang M and Wu X.
  TITLE     Transcription factor-like 5 is a potential DNA- and RNA-binding
            protein essential for maintaining male fertility in mice
  JOURNAL   J Cell Sci 135 (3) (2022)
   PUBMED   34931239
  REMARK    GeneRIF: Transcription factor-like 5 is a potential DNA- and
            RNA-binding protein essential for maintaining male fertility in
            mice.
REFERENCE   6  (residues 1 to 273)
  AUTHORS   Thompson CL, Ng L, Menon V, Martinez S, Lee CK, Glattfelder K,
            Sunkin SM, Henry A, Lau C, Dang C, Garcia-Lopez R, Martinez-Ferre
            A, Pombero A, Rubenstein JLR, Wakeman WB, Hohmann J, Dee N, Sodt
            AJ, Young R, Smith K, Nguyen TN, Kidney J, Kuan L, Jeromin A,
            Kaykas A, Miller J, Page D, Orta G, Bernard A, Riley Z, Smith S,
            Wohnoutka P, Hawrylycz MJ, Puelles L and Jones AR.
  TITLE     A high-resolution spatiotemporal atlas of gene expression of the
            developing mouse brain
  JOURNAL   Neuron 83 (2), 309-323 (2014)
   PUBMED   24952961
REFERENCE   7  (residues 1 to 273)
  AUTHORS   Gallardo TD, John GB, Shirley L, Contreras CM, Akbay EA, Haynie JM,
            Ward SE, Shidler MJ and Castrillon DH.
  TITLE     Genomewide discovery and classification of candidate ovarian
            fertility genes in the mouse
  JOURNAL   Genetics 177 (1), 179-194 (2007)
   PUBMED   17660561
  REMARK    GeneRIF: Transcripts highly enriched in ovary; gene identified as
            candidate female fertility factor.
REFERENCE   8  (residues 1 to 273)
  AUTHORS   Ballow D, Meistrich ML, Matzuk M and Rajkovic A.
  TITLE     Sohlh1 is essential for spermatogonial differentiation
  JOURNAL   Dev Biol 294 (1), 161-167 (2006)
   PUBMED   16564520
REFERENCE   9  (residues 1 to 273)
  AUTHORS   Willnow T, Antignac C, Brandli A, Christensen E, Cox R, Davidson D,
            Davies J, Devuyst O, Eichele G, Hastie N, Verroust P, Schedl A and
            Meij I.
  TITLE     The European renal genome project: an integrated approach towards
            understanding the genetics of kidney development and disease
  JOURNAL   Organogenesis 2 (2), 42-47 (2005)
   PUBMED   19521566
REFERENCE   10 (residues 1 to 273)
  AUTHORS   Siep M, Sleddens-Linkels E, Mulders S, van Eenennaam H, Wassenaar
            E, Van Cappellen WA, Hoogerbrugge J, Grootegoed JA and Baarends WM.
  TITLE     Basic helix-loop-helix transcription factor Tcfl5 interacts with
            the Calmegin gene promoter in mouse spermatogenesis
  JOURNAL   Nucleic Acids Res 32 (21), 6425-6436 (2004)
   PUBMED   15585666
  REMARK    GeneRIF: Tcfl5 is a testis-specific transcription factor that
            interacts with the calmegin gene promoter during spermatogenesis.
            Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL732560.11 and AL669926.6.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5189685.290845.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN01164139
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 103.16 cM"
     Protein         1..273
                     /product="transcription factor-like 5 protein isoform 6"
                     /note="FIG beta; factor in the germline beta;
                     spermatogenesis- and oogenesis-specific bHLH-containing
                     protein 1"
                     /calculated_mol_wt=30288
     Region          173..232
                     /region_name="bHLH_TCFL5"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor-like 5 protein (TCFL5) and similar
                     proteins; cd18909"
                     /db_xref="CDD:381479"
     Site            order(174..179,182..183,185..186,208..209)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381479"
     Site            order(186,188..189,192..193,195..196,199,209..211,
                     213..214,216..217,219..221,223..224)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381479"
     CDS             1..273
                     /gene="Tcfl5"
                     /gene_synonym="Figlb; Sosf1"
                     /coded_by="NM_001409511.1:881..1702"
                     /note="isoform 6 is encoded by transcript variant 6"
                     /db_xref="GeneID:277353"
                     /db_xref="MGI:MGI:2672878"
ORIGIN      
        1 mnvplhqqqn kcttlvknkt aaattalqft yplftsacst ggnaslaqtq sssnscsile
       61 aakhqdiglp rafsfcyqqe iestkqtggs rnkalpeqvw ikvgealckq ainkrnrsri
      121 rqldtsverr algeiqnvge gsstsqgtwq ssessqsnlg eqtqsgpqgg rsqrrerhnr
      181 merdrrrrir iccdelnllv pfcnaetdka ttlqwttafl kyiqerhgds lkkefesvfc
      241 gktgrrlklt rpeslvtcpa qgslqsspam eik
//
LOCUS       NP_001371180             343 aa            linear   ROD 31-OCT-2023
DEFINITION  transmembrane protein 44 isoform 6 [Mus musculus].
ACCESSION   NP_001371180 XP_030104942
VERSION     NP_001371180.1
DBSOURCE    REFSEQ: accession NM_001384251.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 343)
  AUTHORS   Bedogni F and Hevner RF.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 343)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC104885.8.
            
            On Jun 12, 2020 this sequence version replaced XP_030104942.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR7345562.1022581.1,
                                           SRR14777535.3370950.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 21.34 cM"
     Protein         1..343
                     /product="transmembrane protein 44 isoform 6"
                     /calculated_mol_wt=37842
     CDS             1..343
                     /gene="Tmem44"
                     /gene_synonym="1700007N03Rik; 9330161C17Rik; B230220N21"
                     /coded_by="NM_001384251.1:445..1476"
                     /note="isoform 6 is encoded by transcript variant 9"
                     /db_xref="GeneID:224090"
                     /db_xref="MGI:MGI:1924489"
ORIGIN      
        1 mnfmftlfpv cgsksksksg qssrerrrrh lrasvfalal plslgpgwai wtaipkapap
       61 vrgpqrrllg sllqenpevf gyllgaiaaf gswasrippf snicrgksls yihlwtrfls
      121 alagllyasa ivahdrqpey llqatpwfli slgraaldla iiflscviks rmsrafrfat
      181 aearesadtq alltcaekee enqeartedk nsdwvpltsl shckplrtmt aisrymelti
      241 epaqqagcsa trlpgdgqts trdaasqepp syppiqviqa rvssssssev ssinsdleky
      301 wealnseqwd pedvnlerkk dgellrvqvr raslspvdla sdd
//
LOCUS       NP_001388423            1314 aa            linear   ROD 31-OCT-2023
DEFINITION  neurabin-1 isoform 3 [Mus musculus].
ACCESSION   NP_001388423
VERSION     NP_001388423.1
DBSOURCE    REFSEQ: accession NM_001401494.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 1314)
  AUTHORS   Salamon I, Park Y, Miskic T, Kopic J, Matteson P, Page NF, Roque A,
            McAuliffe GW, Favate J, Garcia-Forn M, Shah P, Judas M, Millonig
            JH, Kostovic I, De Rubeis S, Hart RP, Krsnik Z and Rasin MR.
  TITLE     Celf4 controls mRNA translation underlying synaptic development in
            the prenatal mammalian neocortex
  JOURNAL   Nat Commun 14 (1), 6025 (2023)
   PUBMED   37758766
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 1314)
  AUTHORS   Edler,M.C., Salek,A.B., Watkins,D.S., Kaur,H., Morris,C.W.,
            Yamamoto,B.K. and Baucum,A.J. 2nd.
  TITLE     Mechanisms Regulating the Association of Protein Phosphatase 1 with
            Spinophilin and Neurabin
  JOURNAL   ACS Chem Neurosci 9 (11), 2701-2712 (2018)
   PUBMED   29786422
REFERENCE   3  (residues 1 to 1314)
  AUTHORS   Wu H, Cottingham C, Chen L, Wang H, Che P, Liu K and Wang Q.
  TITLE     Age-dependent differential regulation of anxiety- and
            depression-related behaviors by neurabin and spinophilin
  JOURNAL   PLoS One 12 (7), e0180638 (2017)
   PUBMED   28700667
  REMARK    GeneRIF: two homologs neurabin and spinophilin play important yet
            distinct roles in the regulation of anxiety- and depression-like
            behaviors in an age-dependent manner.
            Publication Status: Online-Only
REFERENCE   4  (residues 1 to 1314)
  AUTHORS   Che P, Chen Y, Lu R, Peng N, Gannon M, Wyss JM, Jiao K and Wang Q.
  TITLE     Spinophilin Is Indispensable for the alpha2B Adrenergic
            Receptor-Elicited Hypertensive Response
  JOURNAL   PLoS One 10 (8), e0135030 (2015)
   PUBMED   26244553
  REMARK    GeneRIF: Data indicate that In arrestin 3 deficient mice, where the
            alpha2B adrenergic receptor has a stronger binding to spinophilin,
            the hypertensive response is enhanced.
            Publication Status: Online-Only
REFERENCE   5  (residues 1 to 1314)
  AUTHORS   Chen Y, Liu Y, Cottingham C, McMahon L, Jiao K, Greengard P and
            Wang Q.
  TITLE     Neurabin scaffolding of adenosine receptor and RGS4 regulates
            anti-seizure effect of endogenous adenosine
  JOURNAL   J Neurosci 32 (8), 2683-2695 (2012)
   PUBMED   22357852
REFERENCE   6  (residues 1 to 1314)
  AUTHORS   Orioli D, Colaluca IN, Stefanini M, Riva S, Dotti CG and Peverali
            FA.
  TITLE     Rac3-induced neuritogenesis requires binding to Neurabin I
  JOURNAL   Mol Biol Cell 17 (5), 2391-2400 (2006)
   PUBMED   16525025
  REMARK    GeneRIF: Neurabin I mediates Rac3-induced neuritogenesis, possibly
            by anchoring Rac3 to growth cone F-actin.
REFERENCE   7  (residues 1 to 1314)
  AUTHORS   Ono R, Nakamura K, Inoue K, Naruse M, Usami T, Wakisaka-Saito N,
            Hino T, Suzuki-Migishima R, Ogonuki N, Miki H, Kohda T, Ogura A,
            Yokoyama M, Kaneko-Ishino T and Ishino F.
  TITLE     Deletion of Peg10, an imprinted gene acquired from a
            retrotransposon, causes early embryonic lethality
  JOURNAL   Nat Genet 38 (1), 101-106 (2006)
   PUBMED   16341224
REFERENCE   8  (residues 1 to 1314)
  AUTHORS   Ryan XP, Alldritt J, Svenningsson P, Allen PB, Wu GY, Nairn AC and
            Greengard P.
  TITLE     The Rho-specific GEF Lfc interacts with neurabin and spinophilin to
            regulate dendritic spine morphology
  JOURNAL   Neuron 47 (1), 85-100 (2005)
   PUBMED   15996550
REFERENCE   9  (residues 1 to 1314)
  AUTHORS   Carmody LC, Bauman PA, Bass MA, Mavila N, DePaoli-Roach AA and
            Colbran RJ.
  TITLE     A protein phosphatase-1gamma1 isoform selectivity determinant in
            dendritic spine-associated neurabin
  JOURNAL   J Biol Chem 279 (21), 21714-21723 (2004)
   PUBMED   15016827
  REMARK    GeneRIF: there is a novel PP1gamma1-selective interaction domain in
            neurabin that may allow for selective regulation and/or subcellular
            targeting of PP1 isoforms
REFERENCE   10 (residues 1 to 1314)
  AUTHORS   Ono R, Shiura H, Aburatani H, Kohda T, Kaneko-Ishino T and Ishino
            F.
  TITLE     Identification of a large novel imprinted gene cluster on mouse
            proximal chromosome 6
  JOURNAL   Genome Res 13 (7), 1696-1705 (2003)
   PUBMED   12840045
  REMARK    GeneRIF: Ppp1r9a gene, found in a cluster of imprinted genes on
            chromosome 6, is preferentially expressed from the maternal allele
            at embryonic stages, but biallelically expressed in neonatal
            tissues.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC068500.4 and AC074225.4.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            CDS exon combination :: SRR11927936.2862958.1,
                                    SRR11927937.5486755.1 [ECO:0000331]
            RNAseq introns       :: single sample supports all introns
                                    SAMN00849381, SAMN00849390 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            imprinted gene :: PMID: 12840045
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1314
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 1.86 cM"
     Protein         1..1314
                     /product="neurabin-1 isoform 3"
                     /note="neural tissue-specific F-actin binding protein;
                     protein phosphatase 1, regulatory (inhibitor) subunit 9A;
                     neurabin-1"
                     /calculated_mol_wt=146659
     Region          435..498
                     /region_name="PDZ_5"
                     /note="PDZ domain; pfam17817"
                     /db_xref="CDD:465518"
     Region          502..591
                     /region_name="PDZ_neurabin-like"
                     /note="PDZ domain of neurabin-1 and neurabin-2, and
                     related domains; cd06790"
                     /db_xref="CDD:467252"
     Site            order(514..520,538,541,571,575,578..579)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467252"
     Region          693..>846
                     /region_name="DR0291"
                     /note="Predicted nucleic acid-binding protein DR0291,
                     contains C4-type Zn-ribbon domain [General function
                     prediction only]; COG1579"
                     /db_xref="CDD:441187"
     Region          1202..1271
                     /region_name="SAM_Neurabin-like"
                     /note="SAM domain of SAM_Neurabin-like subfamily; cd09512"
                     /db_xref="CDD:188911"
     CDS             1..1314
                     /gene="Ppp1r9a"
                     /gene_synonym="2810430P21Rik; 4930518N04Rik; 5330407E15;
                     A230094E16Rik; neurabin-I; NRB"
                     /coded_by="NM_001401494.1:279..4223"
                     /note="isoform 3 is encoded by transcript variant 5"
                     /db_xref="GeneID:243725"
                     /db_xref="MGI:MGI:2442401"
ORIGIN      
        1 mlkaessger ttlrsasphr nayrtefqal kstfdkpksd geqktkegeg sqqsrgrkyg
       61 snvnriknlf mqmgmepsen aaiiaktrgk grpsspqrrm kpkefvektd gsvvklessv
      121 serisrfdtm hdgpsyakft etrkmfersv hesgqnhrys pkkekgggte pqdewggsks
      181 nrgssdslds lsprteavsp tvsqlsavfe nseppgalts gkaesadysv tghyplnlps
      241 vtvtnldtfg rlkdsnskpp snkqdtdted aqksdavpvp evaqkgtsla slpseesqls
      301 teaedvttaq pealdstdkd speepsaenq ampkshilsp rnepledaea nvvgseraqh
      361 qkkdltggdl tspdasassc grevpedsns fesshvymhs dynvyrvrsr ynsdwgetgt
      421 eqdeeedsde nnyyqpdmey seivglpeee eipanrkikf scapikvfnt ysnedydrrn
      481 ddvdpvaasa eyelekrvek lelfpvelek dedglgisii gmgvgadagl eklgifvktv
      541 tdggaaqrdg riqvndqive vdgislvgvt qnfaatvlrn tkgnvrfvig rekpgqvsev
      601 aqlisqtleq errqreller hyaqydaddd entvaelqgv sgncnnnnnr flktgeyatd
      661 eeedeggpil psgdvaievf elpenedmfs psdldtskls hkfkelqikh avteaeiqkl
      721 ktklqaaene kvrweleknq lqqnieenke rmlklesywi eaqtlchtvn ehlketqsqy
      781 qalekkynka kklikdfqqk eldfikrqev erkkreevek ahllevqglq vrirdleaev
      841 frllkqngtq vnnnnnifer rpspgevskg dtmenvevkq tscqdglsqd lneavpeter
      901 ldskalktra qlsvknrrqr ptrtrlydsv sstdgedsle rkawrvsspe secgvtlltp
      961 vtsprafssh httespggsq hpegdpfssi sgdtssssts asdhdtedsp cchqatekal
     1021 qekdddkypk slrtsssfvv qrgkikqkfa dlgaplrrnp nkgkkrkdke keasrfsags
     1081 rifrsklenw kskpssaaqa strspcmpfs wfnesrkgsy sfrnlpsaps plqpspetqv
     1141 sdktgsknft fnddfspsst ssadlsglga epktpglsqs lalssdeild dgqspkhtqs
     1201 qnravhewsv qqvshwlmsl sldqyvpefs aqsisgeqll qldgnklkal gmtssqdral
     1261 vkkklkemkm slekarkaqe kmekqreklr rkeqeqmqrk skksekmtst adqp
//
LOCUS       NP_001396438             415 aa            linear   ROD 31-OCT-2023
DEFINITION  transcription factor-like 5 protein isoform 3 [Mus musculus].
ACCESSION   NP_001396438
VERSION     NP_001396438.1
DBSOURCE    REFSEQ: accession NM_001409509.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 415)
  AUTHORS   Zhang FL, Feng YQ, Wang JY, Zhu KX, Wang L, Yan JM, Li XX, Wang JJ,
            Ge W, De Felici M and Shen W.
  TITLE     Single cell epigenomic and transcriptomic analysis uncovers
            potential transcription factors regulating mitotic/meiotic switch
  JOURNAL   Cell Death Dis 14 (2), 134 (2023)
   PUBMED   36797258
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 415)
  AUTHORS   Cecchini K, Biasini A, Yu T, Saflund M, Mou H, Arif A, Eghbali A,
            Colpan C, Gainetdinov I, de Rooij DG, Weng Z, Zamore PD and Ozata
            DM.
  TITLE     The transcription factor TCFL5 responds to A-MYB to elaborate the
            male meiotic program in mice
  JOURNAL   Reproduction 165 (2), 183-196 (2023)
   PUBMED   36395073
  REMARK    GeneRIF: The transcription factor TCFL5 responds to A-MYB to
            elaborate the male meiotic program in mice.
            Publication Status: Online-Only
REFERENCE   3  (residues 1 to 415)
  AUTHORS   Yu T, Biasini A, Cecchini K, Saflund M, Mou H, Arif A, Eghbali A,
            de Rooij D, Weng Z, Zamore PD and Ozata DM.
  TITLE     A-MYB/TCFL5 regulatory architecture ensures the production of
            pachytene piRNAs in placental mammals
  JOURNAL   RNA 29 (1), 30-43 (2022)
   PUBMED   36241367
  REMARK    Publication Status: Available-Online prior to print
REFERENCE   4  (residues 1 to 415)
  AUTHORS   Galan-Martinez J, Berenguer I, Del Carmen Maza M, Stamatakis K,
            Girones N and Fresno M.
  TITLE     TCFL5 deficiency impairs the pachytene to diplotene transition
            during spermatogenesis in the mouse
  JOURNAL   Sci Rep 12 (1), 10956 (2022)
   PUBMED   35768632
  REMARK    GeneRIF: TCFL5 deficiency impairs the pachytene to diplotene
            transition during spermatogenesis in the mouse.
            Publication Status: Online-Only
REFERENCE   5  (residues 1 to 415)
  AUTHORS   Xu W, Zhang Y, Qin D, Gui Y, Wang S, Du G, Yang F, Li L, Yuan S,
            Wang M and Wu X.
  TITLE     Transcription factor-like 5 is a potential DNA- and RNA-binding
            protein essential for maintaining male fertility in mice
  JOURNAL   J Cell Sci 135 (3) (2022)
   PUBMED   34931239
  REMARK    GeneRIF: Transcription factor-like 5 is a potential DNA- and
            RNA-binding protein essential for maintaining male fertility in
            mice.
REFERENCE   6  (residues 1 to 415)
  AUTHORS   Thompson CL, Ng L, Menon V, Martinez S, Lee CK, Glattfelder K,
            Sunkin SM, Henry A, Lau C, Dang C, Garcia-Lopez R, Martinez-Ferre
            A, Pombero A, Rubenstein JLR, Wakeman WB, Hohmann J, Dee N, Sodt
            AJ, Young R, Smith K, Nguyen TN, Kidney J, Kuan L, Jeromin A,
            Kaykas A, Miller J, Page D, Orta G, Bernard A, Riley Z, Smith S,
            Wohnoutka P, Hawrylycz MJ, Puelles L and Jones AR.
  TITLE     A high-resolution spatiotemporal atlas of gene expression of the
            developing mouse brain
  JOURNAL   Neuron 83 (2), 309-323 (2014)
   PUBMED   24952961
REFERENCE   7  (residues 1 to 415)
  AUTHORS   Gallardo TD, John GB, Shirley L, Contreras CM, Akbay EA, Haynie JM,
            Ward SE, Shidler MJ and Castrillon DH.
  TITLE     Genomewide discovery and classification of candidate ovarian
            fertility genes in the mouse
  JOURNAL   Genetics 177 (1), 179-194 (2007)
   PUBMED   17660561
  REMARK    GeneRIF: Transcripts highly enriched in ovary; gene identified as
            candidate female fertility factor.
REFERENCE   8  (residues 1 to 415)
  AUTHORS   Ballow D, Meistrich ML, Matzuk M and Rajkovic A.
  TITLE     Sohlh1 is essential for spermatogonial differentiation
  JOURNAL   Dev Biol 294 (1), 161-167 (2006)
   PUBMED   16564520
REFERENCE   9  (residues 1 to 415)
  AUTHORS   Willnow T, Antignac C, Brandli A, Christensen E, Cox R, Davidson D,
            Davies J, Devuyst O, Eichele G, Hastie N, Verroust P, Schedl A and
            Meij I.
  TITLE     The European renal genome project: an integrated approach towards
            understanding the genetics of kidney development and disease
  JOURNAL   Organogenesis 2 (2), 42-47 (2005)
   PUBMED   19521566
REFERENCE   10 (residues 1 to 415)
  AUTHORS   Siep M, Sleddens-Linkels E, Mulders S, van Eenennaam H, Wassenaar
            E, Van Cappellen WA, Hoogerbrugge J, Grootegoed JA and Baarends WM.
  TITLE     Basic helix-loop-helix transcription factor Tcfl5 interacts with
            the Calmegin gene promoter in mouse spermatogenesis
  JOURNAL   Nucleic Acids Res 32 (21), 6425-6436 (2004)
   PUBMED   15585666
  REMARK    GeneRIF: Tcfl5 is a testis-specific transcription factor that
            interacts with the calmegin gene promoter during spermatogenesis.
            Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL732560.11 and AL669926.6.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR15390196.506011.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN01164139
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 103.16 cM"
     Protein         1..415
                     /product="transcription factor-like 5 protein isoform 3"
                     /note="FIG beta; factor in the germline beta;
                     spermatogenesis- and oogenesis-specific bHLH-containing
                     protein 1"
                     /calculated_mol_wt=43312
     Region          389..>407
                     /region_name="bHLH_SF"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     cl00081"
                     /db_xref="CDD:469605"
     CDS             1..415
                     /gene="Tcfl5"
                     /gene_synonym="Figlb; Sosf1"
                     /coded_by="NM_001409509.1:159..1406"
                     /note="isoform 3 is encoded by transcript variant 3"
                     /db_xref="GeneID:277353"
                     /db_xref="MGI:MGI:2672878"
ORIGIN      
        1 msgpgprepp peagatggea gpegagggda algepglsft ttdlslvemt eveytqlqhi
       61 lyshmeaadg elearlgsal lagpgagsga agslapappv ypvlcpplaa dapclghvdf
      121 qelrmmllge agaaektpgg adgtrtradg vakegaggag pdgapearak ptvrvrledr
      181 fnsmpaeppa prgaepaesg valnnlvtli rhpselmnvp lhqqqnkctt lvknktaaat
      241 talqftyplf tsacstggna slaqtqsssn scsileaakh qdiglprafs fcyqqeiest
      301 kqtggsrnka lpeqvwikvg ealckqaink rnrsrirqld tsverralge iqnvgegsst
      361 sqgtwqsses sqsnlgeqtq sgpqggrsqr rerhnrmerd rrnlracfav klaeg
//
LOCUS       NP_001371179             333 aa            linear   ROD 31-OCT-2023
DEFINITION  transmembrane protein 44 isoform 4 [Mus musculus].
ACCESSION   NP_001371179 XP_030104943
VERSION     NP_001371179.1
DBSOURCE    REFSEQ: accession NM_001384250.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 333)
  AUTHORS   Bedogni F and Hevner RF.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 333)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC104885.8.
            
            On Jun 12, 2020 this sequence version replaced XP_030104943.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR10662774.313444.1,
                                           SRR9219380.22884.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164139 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 21.34 cM"
     Protein         1..333
                     /product="transmembrane protein 44 isoform 4"
                     /calculated_mol_wt=36593
     CDS             1..333
                     /gene="Tmem44"
                     /gene_synonym="1700007N03Rik; 9330161C17Rik; B230220N21"
                     /coded_by="NM_001384250.1:445..1446"
                     /note="isoform 4 is encoded by transcript variant 7"
                     /db_xref="GeneID:224090"
                     /db_xref="MGI:MGI:1924489"
ORIGIN      
        1 mnfmftlfpv cgsksksksg qssrerrrrh lrasvfalal plslgpgwai wtaipkapap
       61 vrgpqrrllg sllqenpevf gyllgaiaaf gswasrippf snicrgksls yihlwtrfls
      121 alagllyasa ivahdrqpey llqatpwfli slgraaldla iiflscviks rmsrafrfat
      181 aearesadtq alltcaekee enqeartedk nsdwvpltsl shckplrtmt aisrymelti
      241 epaqqagcsa trlpgdgqts trdaasqepp syppiqviqa rvssssssev ssinsdlewd
      301 pedvnlerkk dgellrvqvr raslspvdla sdd
//
LOCUS       NP_766506                607 aa            linear   ROD 31-OCT-2023
DEFINITION  zinc finger protein 317 [Mus musculus].
ACCESSION   NP_766506
VERSION     NP_766506.4
DBSOURCE    REFSEQ: accession NM_172918.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 607)
  AUTHORS   Yao F, Huang S, Liu J, Tan C, Xu M, Wang D, Huang M, Zhu Y, Huang X
            and He S.
  TITLE     Deletion of ARGLU1 causes global defects in alternative splicing in
            vivo and mouse cortical malformations primarily via apoptosis
  JOURNAL   Cell Death Dis 14 (8), 543 (2023)
   PUBMED   37612280
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 607)
  AUTHORS   Agata Y, Matsuda E and Shimizu A.
  TITLE     Rapid and efficient cloning of cDNAs encoding Kruppel-like zinc
            finger proteins by degenerate PCR
  JOURNAL   Gene 213 (1-2), 55-64 (1998)
   PUBMED   9630514
REFERENCE   3  (residues 1 to 607)
  AUTHORS   Marine JC, Gilbert DJ, Bellefroid EJ, Martial JA, Ihle JN, Copeland
            NG and Jenkins NA.
  TITLE     Chromosomal location of fifteen unique mouse KRAB-containing zinc
            finger loci
  JOURNAL   Mamm Genome 7 (6), 413-416 (1996)
   PUBMED   8662221
REFERENCE   4  (residues 1 to 607)
  AUTHORS   Bellefroid EJ, Marine JC, Matera AG, Bourguignon C, Desai T, Healy
            KC, Bray-Ward P, Martial JA, Ihle JN and Ward DC.
  TITLE     Emergence of the ZNF91 Kruppel-associated box-containing zinc
            finger gene family in the last common ancestor of anthropoidea
  JOURNAL   Proc Natl Acad Sci U S A 92 (23), 10757-10761 (1995)
   PUBMED   7479878
REFERENCE   5  (residues 1 to 607)
  AUTHORS   Ihle JN, Smith-White B, Sisson B, Parker D, Blair DG, Schultz A,
            Kozak C, Lunsford RD, Askew D, Weinstein Y et al.
  TITLE     Activation of the c-H-ras proto-oncogene by retrovirus insertion
            and chromosomal rearrangement in a Moloney leukemia virus-induced
            T-cell leukemia
  JOURNAL   J Virol 63 (7), 2959-2966 (1989)
   PUBMED   2542606
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC132277.3, AK051946.1, AK045365.1 and BC059211.1.
            
            On Sep 3, 2009 this sequence version replaced NP_766506.3.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC059211.1, SRR9219380.70656.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 7.35 cM"
     Protein         1..607
                     /product="zinc finger protein 317"
                     /note="zinc finger protein 75"
                     /calculated_mol_wt=69388
     Region          60..118
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          223..570
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          225..245
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(225,228,241,245)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          253..273
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          281..301
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          309..329
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(314,316,318,320..321,324..325,328,342,344,348..349,
                     352..353,356,370,372,374,376..377,380..381,384)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          337..357
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(337,340,353,357)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          365..385
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          393..413
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          421..441
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(421,424,437,441)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          449..469
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          477..497
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          505..525
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(510,512,514,516..517,520..521,524,538,540,544..545,
                     548..549,552,566,568,570,572..573,576..577,580)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          533..553
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(533,536,549,553)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          561..581
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..607
                     /gene="Zfp317"
                     /gene_synonym="4932416G03; D230022C05Rik; KRAB9; mszf40;
                     Zfp67; Zfp75"
                     /coded_by="NM_172918.4:519..2342"
                     /db_xref="CCDS:CCDS22862.1"
                     /db_xref="GeneID:244713"
                     /db_xref="MGI:MGI:107775"
ORIGIN      
        1 matislspkf amssldsadn qesefslpsk ydscqqslgl fachapepdt parvcsqesv
       61 tfqdiavdft ekewplldss qrklykdvml enysnlsslg yqvgkprlis hleqeedlrm
      121 eergiqqgps pdwgttskvk wsilledifg keasddvrle tshlletsse fshlcevfdi
      181 gphlaqpvgr ptgkrpyhhh scgvknrihl tqhmsmndgr kwhkchqcqk afttsasltr
      241 hhrihtgekp yecsscgkaf ndpsalrsht rthlkekpfd csqcsnafrt lsalkihmrv
      301 htgerpykcd ecgkaygrsc hliahkrtht gerpyecqdc gkafqhpshl kehvrnhtge
      361 kpyectqcgk afrwksnfnl hkknhmvekt yeckecgksf sdllsrrkhm rihivkkpve
      421 chqcgktfrn qsilkthmns htgerpygcd lcgkafsass nltahrkiht qerhyectsc
      481 gkvfgdylsr rrhmsihlvk krvdcrqcgk afrnqstlkt hmrshtgekp yecdhcgkaf
      541 sigsnlnvhr rihtgekpye clicgkafsd hsslrshvkt hrgrsslrrl cgkgfseysn
      601 aeeawqt
//
LOCUS       NP_001347264             490 aa            linear   ROD 31-OCT-2023
DEFINITION  transcription factor-like 5 protein isoform 1 [Mus musculus].
ACCESSION   NP_001347264 XP_006500715
VERSION     NP_001347264.1
DBSOURCE    REFSEQ: accession NM_001360335.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 490)
  AUTHORS   Zhang FL, Feng YQ, Wang JY, Zhu KX, Wang L, Yan JM, Li XX, Wang JJ,
            Ge W, De Felici M and Shen W.
  TITLE     Single cell epigenomic and transcriptomic analysis uncovers
            potential transcription factors regulating mitotic/meiotic switch
  JOURNAL   Cell Death Dis 14 (2), 134 (2023)
   PUBMED   36797258
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 490)
  AUTHORS   Cecchini K, Biasini A, Yu T, Saflund M, Mou H, Arif A, Eghbali A,
            Colpan C, Gainetdinov I, de Rooij DG, Weng Z, Zamore PD and Ozata
            DM.
  TITLE     The transcription factor TCFL5 responds to A-MYB to elaborate the
            male meiotic program in mice
  JOURNAL   Reproduction 165 (2), 183-196 (2023)
   PUBMED   36395073
  REMARK    GeneRIF: The transcription factor TCFL5 responds to A-MYB to
            elaborate the male meiotic program in mice.
            Publication Status: Online-Only
REFERENCE   3  (residues 1 to 490)
  AUTHORS   Yu T, Biasini A, Cecchini K, Saflund M, Mou H, Arif A, Eghbali A,
            de Rooij D, Weng Z, Zamore PD and Ozata DM.
  TITLE     A-MYB/TCFL5 regulatory architecture ensures the production of
            pachytene piRNAs in placental mammals
  JOURNAL   RNA 29 (1), 30-43 (2022)
   PUBMED   36241367
  REMARK    Publication Status: Available-Online prior to print
REFERENCE   4  (residues 1 to 490)
  AUTHORS   Galan-Martinez J, Berenguer I, Del Carmen Maza M, Stamatakis K,
            Girones N and Fresno M.
  TITLE     TCFL5 deficiency impairs the pachytene to diplotene transition
            during spermatogenesis in the mouse
  JOURNAL   Sci Rep 12 (1), 10956 (2022)
   PUBMED   35768632
  REMARK    GeneRIF: TCFL5 deficiency impairs the pachytene to diplotene
            transition during spermatogenesis in the mouse.
            Publication Status: Online-Only
REFERENCE   5  (residues 1 to 490)
  AUTHORS   Xu W, Zhang Y, Qin D, Gui Y, Wang S, Du G, Yang F, Li L, Yuan S,
            Wang M and Wu X.
  TITLE     Transcription factor-like 5 is a potential DNA- and RNA-binding
            protein essential for maintaining male fertility in mice
  JOURNAL   J Cell Sci 135 (3) (2022)
   PUBMED   34931239
  REMARK    GeneRIF: Transcription factor-like 5 is a potential DNA- and
            RNA-binding protein essential for maintaining male fertility in
            mice.
REFERENCE   6  (residues 1 to 490)
  AUTHORS   Thompson CL, Ng L, Menon V, Martinez S, Lee CK, Glattfelder K,
            Sunkin SM, Henry A, Lau C, Dang C, Garcia-Lopez R, Martinez-Ferre
            A, Pombero A, Rubenstein JLR, Wakeman WB, Hohmann J, Dee N, Sodt
            AJ, Young R, Smith K, Nguyen TN, Kidney J, Kuan L, Jeromin A,
            Kaykas A, Miller J, Page D, Orta G, Bernard A, Riley Z, Smith S,
            Wohnoutka P, Hawrylycz MJ, Puelles L and Jones AR.
  TITLE     A high-resolution spatiotemporal atlas of gene expression of the
            developing mouse brain
  JOURNAL   Neuron 83 (2), 309-323 (2014)
   PUBMED   24952961
REFERENCE   7  (residues 1 to 490)
  AUTHORS   Gallardo TD, John GB, Shirley L, Contreras CM, Akbay EA, Haynie JM,
            Ward SE, Shidler MJ and Castrillon DH.
  TITLE     Genomewide discovery and classification of candidate ovarian
            fertility genes in the mouse
  JOURNAL   Genetics 177 (1), 179-194 (2007)
   PUBMED   17660561
  REMARK    GeneRIF: Transcripts highly enriched in ovary; gene identified as
            candidate female fertility factor.
REFERENCE   8  (residues 1 to 490)
  AUTHORS   Ballow D, Meistrich ML, Matzuk M and Rajkovic A.
  TITLE     Sohlh1 is essential for spermatogonial differentiation
  JOURNAL   Dev Biol 294 (1), 161-167 (2006)
   PUBMED   16564520
REFERENCE   9  (residues 1 to 490)
  AUTHORS   Willnow T, Antignac C, Brandli A, Christensen E, Cox R, Davidson D,
            Davies J, Devuyst O, Eichele G, Hastie N, Verroust P, Schedl A and
            Meij I.
  TITLE     The European renal genome project: an integrated approach towards
            understanding the genetics of kidney development and disease
  JOURNAL   Organogenesis 2 (2), 42-47 (2005)
   PUBMED   19521566
REFERENCE   10 (residues 1 to 490)
  AUTHORS   Siep M, Sleddens-Linkels E, Mulders S, van Eenennaam H, Wassenaar
            E, Van Cappellen WA, Hoogerbrugge J, Grootegoed JA and Baarends WM.
  TITLE     Basic helix-loop-helix transcription factor Tcfl5 interacts with
            the Calmegin gene promoter in mouse spermatogenesis
  JOURNAL   Nucleic Acids Res 32 (21), 6425-6436 (2004)
   PUBMED   15585666
  REMARK    GeneRIF: Tcfl5 is a testis-specific transcription factor that
            interacts with the calmegin gene promoter during spermatogenesis.
            Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL732560.11 and AL669926.6.
            
            On Jan 31, 2018 this sequence version replaced XP_006500715.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY234363.1, SRR15390195.729691.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164142 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 103.16 cM"
     Protein         1..490
                     /product="transcription factor-like 5 protein isoform 1"
                     /note="FIG beta; factor in the germline beta;
                     spermatogenesis- and oogenesis-specific bHLH-containing
                     protein 1"
                     /calculated_mol_wt=51955
     Region          390..449
                     /region_name="bHLH_TCFL5"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor-like 5 protein (TCFL5) and similar
                     proteins; cd18909"
                     /db_xref="CDD:381479"
     Site            order(391..396,399..400,402..403,425..426)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381479"
     Site            order(403,405..406,409..410,412..413,416,426..428,
                     430..431,433..434,436..438,440..441)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381479"
     CDS             1..490
                     /gene="Tcfl5"
                     /gene_synonym="Figlb; Sosf1"
                     /coded_by="NM_001360335.2:159..1631"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /db_xref="GeneID:277353"
                     /db_xref="MGI:MGI:2672878"
ORIGIN      
        1 msgpgprepp peagatggea gpegagggda algepglsft ttdlslvemt eveytqlqhi
       61 lyshmeaadg elearlgsal lagpgagsga agslapappv ypvlcpplaa dapclghvdf
      121 qelrmmllge agaaektpgg adgtrtradg vakegaggag pdgapearak ptvrvrledr
      181 fnsmpaeppa prgaepaesg valnnlvtli rhpselmnvp lhqqqnkctt lvknktaaat
      241 talqftyplf tsacstggna slaqtqsssn scsileaakh qdiglprafs fcyqqeiest
      301 kqtggsrnka lpeqvwikvg eealckqain krnrsrirql dtsverralg eiqnvgegss
      361 tsqgtwqsse ssqsnlgeqt qsgpqggrsq rrerhnrmer drrrriricc delnllvpfc
      421 naetdkattl qwttaflkyi qerhgdslkk efesvfcgkt grrlkltrpe slvtcpaqgs
      481 lqsspameik
//
LOCUS       NP_001132925             297 aa            linear   MAM 01-NOV-2023
DEFINITION  low affinity immunoglobulin gamma Fc region receptor II-b precursor
            [Ovis aries].
ACCESSION   NP_001132925
VERSION     NP_001132925.1
DBSOURCE    REFSEQ: accession NM_001139453.2
KEYWORDS    RefSeq.
SOURCE      Ovis aries (sheep)
  ORGANISM  Ovis aries
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Bovidae; Caprinae; Ovis.
REFERENCE   1  (residues 1 to 297)
  AUTHORS   Liu Y, Wang A, Qiao S, Zhang G, Xi J, You L, Tian X, Li Q, Zhang L
            and Guo J.
  TITLE     Cloning and characterization of ovine immunoglobulin G Fc receptor
            II (FcgammaRII)
  JOURNAL   Vet Immunol Immunopathol 133 (2-4), 243-249 (2010)
   PUBMED   19733401
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from EU589389.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: EU589389.1, ERR10860003.2054346.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA103992853, SAMEA103992854
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Ovis aries"
                     /db_xref="taxon:9940"
                     /chromosome="1"
                     /map="1"
     Protein         1..297
                     /product="low affinity immunoglobulin gamma Fc region
                     receptor II-b precursor"
                     /note="IgG Fc gamma receptor II; Fc fragment of IgG, low
                     affinity IIb, receptor (CD32)"
                     /calculated_mol_wt=28258
     sig_peptide     1..42
                     /inference="COORDINATES: ab initio prediction:SignalP:4.0"
                     /calculated_mol_wt=4773
     Region          49..127
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          66..70
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          80..84
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          96..100
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          109..114
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          120..123
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          131..213
                     /region_name="Ig2_FcgammaR_like"
                     /note="Second immunoglobulin (Ig)-like domain of
                     Fcgamma-receptors (FcgammaRs), and similar domains;
                     cd05753"
                     /db_xref="CDD:409411"
     Site            order(131,154,160..161)
                     /site_type="other"
                     /note="Fc binding site [polypeptide binding]"
                     /db_xref="CDD:409411"
     Region          131..135
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409411"
     Region          140..142
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409411"
     Site            order(144..146,155,160,199)
                     /site_type="other"
                     /note="pentraxin binding site [polypeptide binding]"
                     /db_xref="CDD:409411"
     Region          146..153
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409411"
     Region          160..166
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409411"
     Region          169..174
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409411"
     Region          178..182
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409411"
     Region          192..197
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409411"
     Region          203..213
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409411"
     CDS             1..297
                     /gene="FCGR2B"
                     /coded_by="NM_001139453.2:73..966"
                     /db_xref="GeneID:100192432"
ORIGIN      
        1 mgissflafp aawrnrahcm pwhpwghmll wtallfpapv pgkpdlpkav vniqpawinv
       61 lredhvtlmc qgtsfyagnl ttwfhngssi htqnqpsysf ransndsgsy rcqreqtsls
      121 dpvhldvisd wlllqtpslv fqegepimlr chswrnhpls kitfyqdgks ktfsylrsnf
      181 sipranlshs gqyrctaflg ktphssqpvn itvqessssd psstttavai gacfaavavv
      241 aaiaawfrlr rkpisagltd aetdaartea entityslls hpdvaeedpe sdyqkcl
//
LOCUS       NP_001293049             345 aa            linear   MAM 01-NOV-2023
DEFINITION  acetylserotonin O-methyltransferase [Ovis aries].
ACCESSION   NP_001293049 XP_012012318
VERSION     NP_001293049.1
DBSOURCE    REFSEQ: accession NM_001306120.2
KEYWORDS    RefSeq.
SOURCE      Ovis aries (sheep)
  ORGANISM  Ovis aries
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Bovidae; Caprinae; Ovis.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from KC290950.1.
            
            On Apr 14, 2015 this sequence version replaced XP_012012318.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: KC290950.1, JQ647512.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA103992853,
                                           SAMEA103992855 [ECO:0006172]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Ovis aries"
                     /db_xref="taxon:9940"
                     /chromosome="X"
                     /chromosome="Y"
                     /map="X"
                     /map="Y"
     Protein         1..345
                     /product="acetylserotonin O-methyltransferase"
                     /EC_number="2.1.1.4"
                     /note="hydroxyindole O-methyltransferase"
                     /calculated_mol_wt=38303
     Region          12..100
                     /region_name="dimerization2"
                     /note="dimerization domain; pfam16864"
                     /db_xref="CDD:465287"
     Region          117..327
                     /region_name="Methyltransf_2"
                     /note="O-methyltransferase domain; pfam00891"
                     /db_xref="CDD:395719"
     Site            order(186..192,210..211,235..237,252)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
     CDS             1..345
                     /gene="ASMT"
                     /gene_synonym="HIOMT"
                     /coded_by="NM_001306120.2:98..1135"
                     /db_xref="GeneID:101114754"
ORIGIN      
        1 mcsqegddyr llkeyangfm vsqvlfaace lgvfellaea lepldsaavs srlgssprgt
       61 ellldtcvsl kllqaavrgg kavyantela stylvrgspr sqrdmllysg rtayvcwrhl
      121 aeavregrnq ypkafripse elfsaiyrse derlrfmedl qdvwrlegas vlaafdlsps
      181 plicdlgggs galaracvsl yprcrdivfd ipgvvrmakr hfsawederi sfhegdffkd
      241 plpeadlyil arvlhdwtda kcchllqrly racrtgggvl vieslldadg rgplttllys
      301 lnmlvqtegr ertpaqyhal lapagfrdvq crrtggtyda vlgrk
//
LOCUS       NP_001397302              70 aa            linear   MAM 01-NOV-2023
DEFINITION  small leucine-rich protein 1 [Ovis aries].
ACCESSION   NP_001397302
VERSION     NP_001397302.1
DBSOURCE    REFSEQ: accession NM_001410373.1
KEYWORDS    RefSeq.
SOURCE      Ovis aries (sheep)
  ORGANISM  Ovis aries
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Bovidae; Caprinae; Ovis.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAEVFA010000139.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: EE781949.1, EE781087.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA104494985, SAMEA104495026
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..70
                     /organism="Ovis aries"
                     /db_xref="taxon:9940"
                     /chromosome="8"
                     /map="8"
     Protein         1..70
                     /product="small leucine-rich protein 1"
                     /calculated_mol_wt=8034
     CDS             1..70
                     /gene="SMLR1"
                     /coded_by="NM_001410373.1:88..300"
                     /db_xref="GeneID:101120501"
ORIGIN      
        1 mspvlsellr elpgwflfsg iflpvtllll lliayfrikl mevneelsqt pdhqhslnag
       61 sphyqrkkrm
//
LOCUS       NP_001132924             349 aa            linear   MAM 01-NOV-2023
DEFINITION  high affinity immunoglobulin gamma Fc receptor I precursor [Ovis
            aries].
ACCESSION   NP_001132924
VERSION     NP_001132924.1
DBSOURCE    REFSEQ: accession NM_001139452.1
KEYWORDS    RefSeq.
SOURCE      Ovis aries (sheep)
  ORGANISM  Ovis aries
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Bovidae; Caprinae; Ovis.
REFERENCE   1  (residues 1 to 349)
  AUTHORS   Qiao S, Liu Y, Zhang J, Yang S, Wan B, Shi P, Zhang H, Guo J and
            Zhang G.
  TITLE     Genetic characterization and ligand specificity of the ovine Fc
            gamma receptor I (ovFc gamma RI)
  JOURNAL   Vet Immunol Immunopathol 137 (3-4), 317-321 (2010)
   PUBMED   20598755
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from EU589388.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: EU589388.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA103992853, SAMEA103992854
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Ovis aries"
                     /db_xref="taxon:9940"
                     /chromosome="1"
                     /map="1"
     Protein         1..349
                     /product="high affinity immunoglobulin gamma Fc receptor I
                     precursor"
                     /note="IgG Fc gamma receptor I; Fc fragment of IgG, high
                     affinity Ia, receptor (CD64); Fc fragment of IgG receptor
                     Ia"
                     /calculated_mol_wt=37792
     sig_peptide     1..16
                     /inference="COORDINATES: ab initio prediction:SignalP:4.0"
                     /calculated_mol_wt=1756
     Region          22..100
                     /region_name="Ig1_FcgammaR_like"
                     /note="First immunoglobulin (Ig)-like domain of
                     Fcgamma-receptors (FcgammaRs), and similar domains;
                     cd05752"
                     /db_xref="CDD:409410"
     Region          23..26
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409410"
     Site            order(25..26,44,52..55)
                     /site_type="other"
                     /note="pentraxin binding site [polypeptide binding]"
                     /db_xref="CDD:409410"
     Region          31..34
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409410"
     Region          38..44
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409410"
     Region          54..59
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409410"
     Region          61..63
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409410"
     Region          68..73
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409410"
     Region          81..86
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409410"
     Region          94..100
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409410"
     Region          104..185
                     /region_name="Ig2_FcgammaR_like"
                     /note="Second immunoglobulin (Ig)-like domain of
                     Fcgamma-receptors (FcgammaRs), and similar domains;
                     cd05753"
                     /db_xref="CDD:409411"
     Site            order(104,127,133..134)
                     /site_type="other"
                     /note="Fc binding site [polypeptide binding]"
                     /db_xref="CDD:409411"
     Region          104..108
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409411"
     Region          113..115
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409411"
     Site            order(117..119,128,133)
                     /site_type="other"
                     /note="pentraxin binding site [polypeptide binding]"
                     /db_xref="CDD:409411"
     Region          119..126
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409411"
     Region          133..139
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409411"
     Region          142..147
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409411"
     Region          151..155
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409411"
     Region          165..170
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409411"
     Region          175..185
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409411"
     Region          204..268
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     CDS             1..349
                     /gene="FCGR1A"
                     /coded_by="NM_001139452.1:14..1063"
                     /db_xref="GeneID:100192431"
ORIGIN      
        1 mwlmialilg apvaeqvdpt kavitlkppw vsvfqeenvt llcegphlpg dtatqwflng
       61 taiktlapry singatfdds geykcqtgls mpsdpvqlev hsdwlllqvs srvflegdpl
      121 vlrchawknm evykmlfykd gtsfwfsnrd seftilktnl shngiyhcsg errrrytsag
      181 vsitikelfp apvlrtsfss phqegnlvnl scetklpsek pglqlyfsfy vgnktlmsrt
      241 tsseyqtfia ktedpglywc eaatedgnli krspelelpv lglqsttpiw fhflfylavg
      301 imflvdsalc ivihkelqrk kmwnleiyld sldsgygkkv pptfknidn
//
LOCUS       NP_001123443             304 aa            linear   MAM 03-NOV-2023
DEFINITION  homeobox protein NANOG [Sus scrofa].
ACCESSION   NP_001123443
VERSION     NP_001123443.2
DBSOURCE    REFSEQ: accession NM_001129971.2
KEYWORDS    RefSeq.
SOURCE      Sus scrofa (pig)
  ORGANISM  Sus scrofa
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae;
            Sus.
REFERENCE   1  (residues 1 to 304)
  AUTHORS   Yang F, Wang N, Wang Y, Yu T and Wang H.
  TITLE     Activin-SMAD signaling is required for maintenance of porcine iPS
            cell self-renewal through upregulation of NANOG and OCT4 expression
  JOURNAL   J Cell Physiol 232 (8), 2253-2262 (2017)
   PUBMED   27996082
  REMARK    GeneRIF: Activin A and overexpression of SMAD2/3 significantly
            promoted expressions of porcine NANOG and OCT4,maintaining induced
            pluripotent stem cell self-renewal through up-regulation of
            Nanog/OCT4 expression.
REFERENCE   2  (residues 1 to 304)
  AUTHORS   Shi R, Bai Y, Li S, Wei H, Zhang X, Li L, Tian XC, Jiang Q, Wang C,
            Qin L, Cai J and Zhang S.
  TITLE     Characteristics of spermatogonial stem cells derived from neonatal
            porcine testis
  JOURNAL   Andrologia 47 (7), 765-778 (2015)
   PUBMED   25251288
REFERENCE   3  (residues 1 to 304)
  AUTHORS   Yang F, Zhang J, Liu Y, Cheng D and Wang H.
  TITLE     Structure and functional evaluation of porcine NANOG that is a
            single-exon gene and has two pseudogenes
  JOURNAL   Int J Biochem Cell Biol 59, 142-152 (2015)
   PUBMED   25542179
  REMARK    GeneRIF: the functional porcine NANOG that is different in
            chromosomal structure from mouse and human genes is a single exon
            gene and encodes the functional NANOG protein.
REFERENCE   4  (residues 1 to 304)
  AUTHORS   Zhang L, Luo YB, Bou G, Kong QR, Huan YJ, Zhu J, Wang JY, Li H,
            Wang F, Shi YQ, Wei YC and Liu ZH.
  TITLE     Overexpression Nanog activates pluripotent genes in porcine fetal
            fibroblasts and nuclear transfer embryos
  JOURNAL   Anat Rec (Hoboken) 294 (11), 1809-1817 (2011)
   PUBMED   21972213
  REMARK    GeneRIF: Results demonstrate that Nanog could interact with and
            activate other pluripotent genes both in porcine fetal fibroblasts
            and embryos.
REFERENCE   5  (residues 1 to 304)
  AUTHORS   Wolf XA, Serup P and Hyttel P.
  TITLE     Three-dimensional localisation of NANOG, OCT4, and E-CADHERIN in
            porcine pre- and peri-implantation embryos
  JOURNAL   Dev Dyn 240 (1), 204-210 (2011)
   PUBMED   21089074
  REMARK    GeneRIF: Localisation of NANOG, OCT4, and E-CADHERIN in porcine
            pre- and peri-implantation embryos.
REFERENCE   6  (residues 1 to 304)
  AUTHORS   Miyamoto K, Tsukiyama T, Yang Y, Li N, Minami N, Yamada M and Imai
            H.
  TITLE     Cell-free extracts from mammalian oocytes partially induce nuclear
            reprogramming in somatic cells
  JOURNAL   Biol Reprod 80 (5), 935-943 (2009)
   PUBMED   19164171
REFERENCE   7  (residues 1 to 304)
  AUTHORS   Yang Y, Liu W, Liu ZL, Hu XX and Li N.
  TITLE     Mapping NANOG to chromosome 5 in swine
  JOURNAL   Anim Genet 35 (5), 411 (2004)
   PUBMED   15373748
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AEMK02000004.1.
            
            On Nov 3, 2023 this sequence version replaced NP_001123443.1.
            
            ##Evidence-Data-START##
            Transcript is intronless :: FJ882402.1, KM186171.1 [ECO:0000345]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Sus scrofa"
                     /db_xref="taxon:9823"
                     /chromosome="1"
                     /map="1"
                     /breed="Duroc"
     Protein         1..304
                     /product="homeobox protein NANOG"
                     /note="homeodomain transcription factor Nanog; nanog
                     homeodox protein"
                     /calculated_mol_wt=34742
     Region          97..152
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..304
                     /gene="NANOG"
                     /coded_by="NM_001129971.2:194..1108"
                     /db_xref="GeneID:100170132"
ORIGIN      
        1 msvdpacpqs llcpeasiss esspmpevyg peenyaslqm saaetldtet vsplpssmdl
       61 liqdspdsst sprvkplpts aekstdkeek vpvkkqkirt vfsqtqlcvl ndrfqrqkyl
      121 slqqmqelsn ilnlsykqvk twfqnqrmkc krwqknhwpr nsnsviqgsa steypgfysy
      181 hqgclvnasg nlpvwgnqsw nnpswsnqtw nsqswsnqtw nsqtwcpqaw nnqtwnsqln
      241 nyveeflqpq lqfqqnsisd leavletage nhnviqqtsk ycgtqqqimd lfpnysmniq
      301 pedm
//
LOCUS       NP_001121925             324 aa            linear   MAM 03-NOV-2023
DEFINITION  intelectin-2 precursor [Sus scrofa].
ACCESSION   NP_001121925
VERSION     NP_001121925.2
DBSOURCE    REFSEQ: accession NM_001128453.2
KEYWORDS    RefSeq.
SOURCE      Sus scrofa (pig)
  ORGANISM  Sus scrofa
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae;
            Sus.
REFERENCE   1  (residues 1 to 324)
  AUTHORS   Uenishi H, Eguchi-Ogawa T, Shinkai H, Okumura N, Suzuki K, Toki D,
            Hamasima N and Awata T.
  TITLE     PEDE (Pig EST Data Explorer) has been expanded into Pig Expression
            Data Explorer, including 10 147 porcine full-length cDNA sequences
  JOURNAL   Nucleic Acids Res 35 (Database issue), D650-D653 (2007)
   PUBMED   17145712
REFERENCE   2  (residues 1 to 324)
  AUTHORS   Jorgensen FG, Hobolth A, Hornshoj H, Bendixen C, Fredholm M and
            Schierup MH.
  TITLE     Comparative analysis of protein coding sequences from human, mouse
            and the domesticated pig
  JOURNAL   BMC Biol 3, 2 (2005)
   PUBMED   15679890
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 324)
  AUTHORS   Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H,
            Okumura N, Hamasima N and Awata T.
  TITLE     PEDE (Pig EST Data Explorer): construction of a database for ESTs
            derived from porcine full-length cDNA libraries
  JOURNAL   Nucleic Acids Res 32 (Database issue), D484-D488 (2004)
   PUBMED   14681463
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AEMK02000022.1.
            
            On Nov 3, 2023 this sequence version replaced NP_001121925.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns
                              SAMEA103886120, SAMEA103886121 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Sus scrofa"
                     /db_xref="taxon:9823"
                     /chromosome="4"
                     /map="4"
                     /breed="Duroc"
     Protein         1..324
                     /product="intelectin-2 precursor"
                     /note="omentin"
                     /calculated_mol_wt=33307
     sig_peptide     1..23
                     /inference="COORDINATES: ab initio prediction:SignalP:4.0"
                     /calculated_mol_wt=2542
     Region          51..93
                     /region_name="GGGWT_bact"
                     /note="fibrinogen-like bacterial YCDxxxxGGGW domain;
                     NF040941"
                     /db_xref="CDD:468872"
     CDS             1..324
                     /gene="ITLN2"
                     /coded_by="NM_001128453.2:146..1120"
                     /db_xref="GeneID:100144619"
ORIGIN      
        1 mpaqrsfgar fclllflsva trgqsaaatq svewfpenes capflsflpr sckeikesch
       61 ragdglyflr tengvvyqtf cdmtsggggw tlvasvhenl magkctlgdr wssqqgsrad
      121 ypegdgnwan yntfgsaeaa tsddyknpgy ydiqardlgi whvpnrsplq qwrnssllry
      181 rtntgffqsl ghnlfglyqk ypvkygigkc wtdngpaipv vydygdaqkt asyyspygqt
      241 efvagfvqfr vfnneraana lcagmrvtgc ntehhciggg gffpegnpaq cgdfsafdwn
      301 gygthtasss sreiteaavl lfyr
//
LOCUS       NP_001186818             346 aa            linear   MAM 03-NOV-2023
DEFINITION  CCAAT/enhancer-binding protein beta [Sus scrofa].
ACCESSION   NP_001186818 XP_003134545
VERSION     NP_001186818.1
DBSOURCE    REFSEQ: accession NM_001199889.2
KEYWORDS    RefSeq.
SOURCE      Sus scrofa (pig)
  ORGANISM  Sus scrofa
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae;
            Sus.
REFERENCE   1  (residues 1 to 346)
  AUTHORS   Zhu M, Li X, Sun R, Shi P, Cao A, Zhang L, Guo Y and Huang J.
  TITLE     The C/EBPbeta-Dependent Induction of TFDP2 Facilitates Porcine
            Reproductive and Respiratory Syndrome Virus Proliferation
  JOURNAL   Virol Sin 36 (6), 1341-1351 (2021)
   PUBMED   34138404
  REMARK    GeneRIF: The C/EBPbeta-Dependent Induction of TFDP2 Facilitates
            Porcine Reproductive and Respiratory Syndrome Virus Proliferation.
REFERENCE   2  (residues 1 to 346)
  AUTHORS   Chen K, Zhou JD, Zhang F, Zhang F, Zhang RR, Zhan MS, Tang XY, Deng
            B, Lei MG and Xiong YZ.
  TITLE     Transcription factor C/EBPbeta promotes the transcription of the
            porcine GPR120 gene
  JOURNAL   J Mol Endocrinol 56 (2), 91-100 (2016)
   PUBMED   26576644
  REMARK    GeneRIF: C/EBP-beta plays a vital role in regulating GPR120
            transcription.
REFERENCE   3  (residues 1 to 346)
  AUTHORS   Wu X, Ji P, Zhang L, Bu G, Gu H, Wang X, Xiong Y and Zuo B.
  TITLE     The Expression of Porcine Prdx6 Gene Is Up-Regulated by C/EBPbeta
            and CREB
  JOURNAL   PLoS One 10 (12), e0144851 (2015)
   PUBMED   26659441
  REMARK    GeneRIF: The expression of porcine Prdx6 gene is up-regulated by
            C/EBPbeta and CREB.
            Publication Status: Online-Only
REFERENCE   4  (residues 1 to 346)
  AUTHORS   Tang Y, Xiong K, Shen M, Mu Y, Li K and Liu H.
  TITLE     CCAAT-enhancer binding protein (C/EBP) beta regulates insulin-like
            growth factor (IGF) 1 expression in porcine liver during prenatal
            and postnatal development
  JOURNAL   Mol Cell Biochem 401 (1-2), 209-218 (2015)
   PUBMED   25543525
  REMARK    GeneRIF: Results show that expression changes of IGF1 genes were
            associated with C/EBP b expression during embryonic and postnatal
            development in porcine liver.
REFERENCE   5  (residues 1 to 346)
  AUTHORS   Yan X, Weijun P, Ning W, Yu W, Wenkai R and Gongshe Y.
  TITLE     Knockdown of both FoxO1 and C/EBPbeta promotes adipogenesis in
            porcine preadipocytes through feedback regulation
  JOURNAL   Cell Biol Int 37 (9), 905-916 (2013)
   PUBMED   23589423
  REMARK    GeneRIF: FoxO1 and C/EBPb regulate preadipocyte adipogenesis
            possibly through C/EBPb-> FoxO1-> C/EBPb feedback regulatory loop
            and FoxO1-C/EBPb protein complex.
REFERENCE   6  (residues 1 to 346)
  AUTHORS   Gao Y and Pan Y.
  TITLE     CCAAT/enhancer binding protein-beta negatively regulates the
            expression of glycerol-3-phosphate dehydrogenase 1 in pig PK-15
            cells
  JOURNAL   J Appl Genet 52 (4), 451-458 (2011)
   PUBMED   21584730
  REMARK    GeneRIF: the pig GPD1 gene is regulated negatively by C/EBP beta in
            cultured kidney cells
REFERENCE   7  (residues 1 to 346)
  AUTHORS   Gillio-Meina C, Hui YY and LaVoie HA.
  TITLE     Expression of CCAAT/enhancer binding proteins alpha and beta in the
            porcine ovary and regulation in primary cultures of granulosa cells
  JOURNAL   Biol Reprod 72 (5), 1194-1204 (2005)
   PUBMED   15647458
  REMARK    GeneRIF: The differential expression of specific CEBPA/B isoforms
            observed in maturing follicles and CL may contribute to changes in
            follicular cell differentiation and increasing steroidogenic
            capacity.
REFERENCE   8  (residues 1 to 346)
  AUTHORS   LaVoie HA, Singh D and Hui YY.
  TITLE     Concerted regulation of the porcine steroidogenic acute regulatory
            protein gene promoter activity by follicle-stimulating hormone and
            insulin-like growth factor I in granulosa cells involves GATA-4 and
            CCAAT/enhancer binding protein beta
  JOURNAL   Endocrinology 145 (7), 3122-3134 (2004)
   PUBMED   15059951
  REMARK    GeneRIF: GATA-4 and C/EBPbeta are both required for FSH +/- IGF-I
            stimulation of the porcine steroidogenic acute regulatory protein
            gene promoter in homologous granulosa cell cultures.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AEMK02000106.1.
            
            On Dec 28, 2010 this sequence version replaced XP_003134545.1.
            
            ##Evidence-Data-START##
            Transcript is intronless :: SRR5275317.189325.1, SRR5275382.89832.1
                                        [ECO:0000345]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Sus scrofa"
                     /db_xref="taxon:9823"
                     /chromosome="17"
                     /map="17"
                     /breed="Duroc"
     Protein         1..346
                     /product="CCAAT/enhancer-binding protein beta"
                     /note="CCAAT/enhancer binding protein (C/EBP), beta"
                     /calculated_mol_wt=36108
     Region          265..335
                     /region_name="bZIP_CEBPB"
                     /note="Basic leucine zipper (bZIP) domain of
                     CCAAT/enhancer-binding protein beta (CEBPB): a DNA-binding
                     and dimerization domain; cd14712"
                     /db_xref="CDD:269860"
     Site            order(270,275,279,281..283,285..290,292,294,296)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269860"
     Region          272..333
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269860"
     Site            order(297,300,303..304,307..308,310..311,313..315,
                     317..318,321..322,324..325,328..329)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269860"
     CDS             1..346
                     /gene="CEBPB"
                     /coded_by="NM_001199889.2:208..1248"
                     /db_xref="GeneID:397360"
                     /db_xref="VGNC:VGNC:95883"
ORIGIN      
        1 mqrlvawdpa clplppppaf ksmevanfyy eadclaaayg gkaapaappa arpgprppag
       61 elgsigdher aidfspylep lgapqapapa tatdtfeaap papapapass gqhhdflsdl
      121 fsddyggknc kkaaeygyvs lgrlgaakna lhpgcfaplh ppppppppqp aelkaepgfe
      181 padckrkeea gapgggaagm aagfpyalra ylgyqavpsg ssgslstsss ssppgtpspa
      241 dakappaacy agaapapsqv ksktkktvdk hsdeykirre rnniavrksr dkakmrnlet
      301 qhkvleltae nerlqkkveq lsrelstlrn lfkqlpepll assghc
//
LOCUS       NP_001301191             506 aa            linear   MAM 06-NOV-2023
DEFINITION  beta-1,4 N-acetylgalactosaminyltransferase 2 [Capra hircus].
ACCESSION   NP_001301191
VERSION     NP_001301191.1
DBSOURCE    REFSEQ: accession NM_001314262.1
KEYWORDS    RefSeq.
SOURCE      Capra hircus (goat)
  ORGANISM  Capra hircus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Bovidae; Caprinae; Capra.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from KP723684.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: KP723683.1, KP723684.1 [ECO:0000332]
            RNAseq introns              :: mixed/partial sample support
                                           SAMN01086873, SAMN01086875
                                           [ECO:0000350]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Capra hircus"
                     /db_xref="taxon:9925"
                     /chromosome="19"
                     /map="19"
     Protein         1..506
                     /product="beta-1,4 N-acetylgalactosaminyltransferase 2"
                     /function="increase ovulation rate"
                     /calculated_mol_wt=57199
     Region          264..>370
                     /region_name="Glycos_transf_2"
                     /note="Glycosyl transferase family 2; pfam00535"
                     /db_xref="CDD:425738"
     CDS             1..506
                     /gene="B4GALNT2"
                     /coded_by="NM_001314262.1:1..1521"
                     /db_xref="GeneID:102190989"
ORIGIN      
        1 mtsfgsrylw ilkmsvlfla lgivlfmfrs vslysefsiy kapllqpsva agmlkllpek
       61 hikslfthdg iwlfpknqck ceawklqqsy yfenaygqte lpavkmrrqa efehfqrreg
      121 lprpppllaq anlpfgypih gvevmplnti pipgvqfegp dapiykvtlk aslgtlntla
      181 dtpdtvvqgr gqkeltilts srtvlnfilq hvsytsteyq hprvdvvsle snssvakfpv
      241 tirfpvmpkl ydpgperklr nlvsiatktf lrphklktml rsireyypdl tvivaddske
      301 pleindshve yytmpygkgw fagrnlaisq vttkyvlwvd ddflfnektk ievlvdvlek
      361 teldvvggsv lgntfqfklf lehtkngdcl hrrtgsfgpl dgfpncvvts gvvnfflaht
      421 erlqrvgfdp rlqrvahsef fidglgslpv gscsdviigh qphssvadpe laalektygr
      481 yrantndkvq fklalhyfkn hlqctt
//
LOCUS       NP_001231259             502 aa            linear   MAM 06-NOV-2023
DEFINITION  beta-1,4 N-acetylgalactosaminyltransferase 2 [Sus scrofa].
ACCESSION   NP_001231259 XP_003358132
VERSION     NP_001231259.1
DBSOURCE    REFSEQ: accession NM_001244330.1
KEYWORDS    RefSeq.
SOURCE      Sus scrofa (pig)
  ORGANISM  Sus scrofa
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae;
            Sus.
REFERENCE   1  (residues 1 to 502)
  AUTHORS   Fischer K, Rieblinger B, Hein R, Sfriso R, Zuber J, Fischer A,
            Klinger B, Liang W, Flisikowski K, Kurome M, Zakhartchenko V,
            Kessler B, Wolf E, Rieben R, Schwinzer R, Kind A and Schnieke A.
  TITLE     Viable pigs after simultaneous inactivation of porcine MHC class I
            and three xenoreactive antigen genes GGTA1, CMAH and B4GALNT2
  JOURNAL   Xenotransplantation 27 (1), e12560 (2020)
   PUBMED   31591751
  REMARK    GeneRIF: Viable pigs after simultaneous inactivation of porcine MHC
            class I and three xenoreactive antigen genes GGTA1, CMAH and
            B4GALNT2.
REFERENCE   2  (residues 1 to 502)
  AUTHORS   Martens GR, Reyes LM, Li P, Butler JR, Ladowski JM, Estrada JL,
            Sidner RA, Eckhoff DE, Tector M and Tector AJ.
  TITLE     Humoral Reactivity of Renal Transplant-Waitlisted Patients to Cells
            From GGTA1/CMAH/B4GalNT2, and SLA Class I Knockout Pigs
  JOURNAL   Transplantation 101 (4), e86-e92 (2017)
   PUBMED   28114170
  REMARK    GeneRIF: Many waitlisted renal transplant patients have minimal
            xenoreactive antibody binding to the GGTA1/CMAH/B4GalNT2 knockout
            pig, but some HLA antibodies in sensitized patients cross-react
            with class I SLA.
            Erratum:[Transplantation. 2018 Feb;102(2):e88. PMID: 29381648]
REFERENCE   3  (residues 1 to 502)
  AUTHORS   Butler JR, Martens GR, Estrada JL, Reyes LM, Ladowski JM, Galli C,
            Perota A, Cunningham CM, Tector M and Joseph Tector A.
  TITLE     Silencing porcine genes significantly reduces human-anti-pig
            cytotoxicity profiles: an alternative to direct complement
            regulation
  JOURNAL   Transgenic Res 25 (5), 751-759 (2016)
   PUBMED   27100221
  REMARK    GeneRIF: Silencing the GGTA1, CMAH and B4GalNT2 genes in pigs
            achieved a significant antigen reduction. Changing the porcine
            carbohydrate profile effectively mediates human antibody-mediated
            complement dependent cytoxicity.
REFERENCE   4  (residues 1 to 502)
  AUTHORS   Uenishi H, Eguchi-Ogawa T, Shinkai H, Okumura N, Suzuki K, Toki D,
            Hamasima N and Awata T.
  TITLE     PEDE (Pig EST Data Explorer) has been expanded into Pig Expression
            Data Explorer, including 10 147 porcine full-length cDNA sequences
  JOURNAL   Nucleic Acids Res 35 (Database issue), D650-D653 (2007)
   PUBMED   17145712
REFERENCE   5  (residues 1 to 502)
  AUTHORS   Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H,
            Okumura N, Hamasima N and Awata T.
  TITLE     PEDE (Pig EST Data Explorer): construction of a database for ESTs
            derived from porcine full-length cDNA libraries
  JOURNAL   Nucleic Acids Res 32 (Database issue), D484-D488 (2004)
   PUBMED   14681463
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK236764.1.
            
            On Sep 16, 2011 this sequence version replaced XP_003358132.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK236764.1, AK234937.1 [ECO:0000332]
            RNAseq introns              :: mixed/partial sample support
                                           SAMEA1487441, SAMEA1876824
                                           [ECO:0000350]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Sus scrofa"
                     /db_xref="taxon:9823"
                     /chromosome="12"
                     /map="12"
     Protein         1..502
                     /product="beta-1,4 N-acetylgalactosaminyltransferase 2"
                     /note="beta 1,4 N-acetylgalactosaminyl transferase;
                     beta-1,4-N-acetyl-galactosaminyl transferase 2"
                     /calculated_mol_wt=56621
     Region          260..>367
                     /region_name="Glycos_transf_2"
                     /note="Glycosyl transferase family 2; pfam00535"
                     /db_xref="CDD:425738"
     Region          <318..>430
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
     CDS             1..502
                     /gene="B4GALNT2"
                     /coded_by="NM_001244330.1:53..1561"
                     /db_xref="GeneID:100621328"
ORIGIN      
        1 mtsysprcls ilkilmvllv lsvglfmfqs vfldtdfsll nspipsptld aqtlkllpek
       61 pdfygenglf pknqcqcdaf ghqesynled aydpqdlpav nlrrqaeleh fqrreglprp
      121 ppllaqpnlp fgypvhgvev mplhtipipg lrfegpdapi yevtltaslg tlntladvpd
      181 nvvkgrgqkq lniltssrel lnfilqhvty tsteyhlhrv dvvsleskss vakfpvtiry
      241 pvmpklydpg perklrdlvt iatktflrph klmtmlrsvr eyypdltviv addskeplki
      301 tdshveyytm pfgkgwfagr nlaisqvttk yvlwvdddfi fnsktrieal vdvlekteld
      361 vvggsvient fqfkllleqg kngdclhqqp gffrpvdgfp dcvvtsgvvn fflahterlq
      421 rigfdprlqr vahseffidg lgsllvgscp hviighqphl pvmdpelatl egnytsyran
      481 teaqikfkla lhyfknylqc vt
//
LOCUS       NP_001131109             678 aa            linear   MAM 06-NOV-2023
DEFINITION  protein DBF4 homolog A [Sus scrofa].
ACCESSION   NP_001131109
VERSION     NP_001131109.1
DBSOURCE    REFSEQ: accession NM_001137637.1
KEYWORDS    RefSeq.
SOURCE      Sus scrofa (pig)
  ORGANISM  Sus scrofa
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae;
            Sus.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from FJ211192.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FJ211192.1 [ECO:0000332]
            RNAseq introns              :: mixed/partial sample support
                                           SAMEA103886111, SAMEA103886112
                                           [ECO:0000350]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Sus scrofa"
                     /db_xref="taxon:9823"
                     /chromosome="9"
                     /map="9"
     Protein         1..678
                     /product="protein DBF4 homolog A"
                     /note="DBF4 homolog; DBF4 zinc finger"
                     /calculated_mol_wt=76882
     Region          42..109
                     /region_name="BRCT"
                     /note="BRCA1 C Terminus (BRCT) domain; pfam00533"
                     /db_xref="CDD:425736"
     Region          294..338
                     /region_name="ZnF_DBF"
                     /note="Zinc finger in DBF-like proteins; smart00586"
                     /db_xref="CDD:128854"
     CDS             1..678
                     /gene="DBF4"
                     /coded_by="NM_001137637.1:216..2252"
                     /db_xref="GeneID:100192446"
ORIGIN      
        1 mnsgamrihs rghfqggiqv kneknrpslk slktdnkpek skykplwgkv fyidlpsgal
       61 seklqkdikd lggrveefls kdinylisnk keakfaqtlg rispvpspes ayaaettsph
      121 pshdgssfks pdsvclsrgk llvekaikdh dfipsnsils nalswgvkil hiddiryyie
      181 qkkkelyllk ksstslrdvg krvgvgaqkg rtgglkkpfv kvedmsqlyr pfylqltnmp
      241 finysiqkps spfdadkppn tqkqtqvklr iqtdgdkcgg vpvqlqlkek kkkgyceccl
      301 qkyedldsvn hllseqhrnf aqsnhyqvvd divsklvfdf veyerdtpkk krikysvgsl
      361 spittnfprk sepkkklevq hnsqkdsren nipvmeqtll hketlepekr fvstsehiph
      421 psselrglek tsnkcsmlnp aendikqnft plpphknkke cildvseqkl iinekdleev
      481 kvdhrpcrpq isiqvsnfnt dnttsqpkqk sdtvllpakd lkekdfhsvf chdsdllgvn
      541 ssqehltiqa ktpsqsppee pnacdiknmd sspsgkihrk vkillgrnkk enlepnveln
      601 kkrteclttq eenricsspl qslrdlfqts eekseflgft syteksgicd vldiweeens
      661 nllsmffssp ststftgf
//
LOCUS       NP_001094497             469 aa            linear   MAM 08-NOV-2023
DEFINITION  24-hydroxycholesterol 7-alpha-hydroxylase isoform 1 [Sus scrofa].
ACCESSION   NP_001094497
VERSION     NP_001094497.2
DBSOURCE    REFSEQ: accession NM_001101027.2
KEYWORDS    RefSeq.
SOURCE      Sus scrofa (pig)
  ORGANISM  Sus scrofa
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae;
            Sus.
REFERENCE   1  (residues 1 to 469)
  AUTHORS   Uenishi H, Eguchi-Ogawa T, Shinkai H, Okumura N, Suzuki K, Toki D,
            Hamasima N and Awata T.
  TITLE     PEDE (Pig EST Data Explorer) has been expanded into Pig Expression
            Data Explorer, including 10 147 porcine full-length cDNA sequences
  JOURNAL   Nucleic Acids Res 35 (Database issue), D650-D653 (2007)
   PUBMED   17145712
REFERENCE   2  (residues 1 to 469)
  AUTHORS   Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H,
            Okumura N, Hamasima N and Awata T.
  TITLE     PEDE (Pig EST Data Explorer): construction of a database for ESTs
            derived from porcine full-length cDNA libraries
  JOURNAL   Nucleic Acids Res 32 (Database issue), D484-D488 (2004)
   PUBMED   14681463
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AEMK02000055.1.
            
            On Nov 8, 2023 this sequence version replaced NP_001094497.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK347836.1, KP687257.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA103886111,
                                           SAMEA103886114 [ECO:0006172]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Sus scrofa"
                     /db_xref="taxon:9823"
                     /chromosome="7"
                     /map="7"
                     /breed="Duroc"
     Protein         1..469
                     /product="24-hydroxycholesterol 7-alpha-hydroxylase
                     isoform 1"
                     /EC_number="1.14.14.26"
                     /note="cytochrome P450 39A1; cytochrome P450, family 39,
                     subfamily A, polypeptide 1"
                     /calculated_mol_wt=54220
     Region          49..462
                     /region_name="CYP39A1"
                     /note="cytochrome P450 family 39, subfamily A, polypeptide
                     1; cd20635"
                     /db_xref="CDD:410728"
     Site            order(96..97,100..101,115,119,250,269,272..274,277,
                     342..346,452..453)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:410728"
     Site            order(116,123,273..274,277..278,281,342,344,406..408,412,
                     414..416,419..420,454)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410728"
     CDS             1..469
                     /gene="CYP39A1"
                     /coded_by="NM_001101027.2:227..1636"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /db_xref="GeneID:100113410"
                     /db_xref="VGNC:VGNC:103375"
ORIGIN      
        1 mefispavii ilgcvtlllf lqwknlrgpp ciggwipwig agfefgkapl efiekariky
       61 gpiftvlamg trmtfvteee gmnvflkske vnfelavqnp vyrtasipkn iflklhekly
      121 vmmkgkmgtf nlyqftgqlt eelhkqlenl gthgtmdlnn lvrhllypvt vnvlfkkglf
      181 ptnerkiref hqhfqaydeg feygsqlper llrnwskskn wllalfekni pdiktyksak
      241 dhsqtimqdi ldllemetne qmspnyglll lwaslsnavp vtfwtlafil shpnihrtil
      301 egissvfgtt gkdkievsed nlkklpliqw ciletirlra pgvitrkvlk pvkilnytvp
      361 sgdllmlspf wlhrnpkyfp epdlfkperw kkanlekhaf ldwfmafgtg kyqcpgrwla
      421 lleiqmcvil ifyyydctll dplpkqsslh lvgvqqpegq crvefkqrk
//
LOCUS       NP_001302673              45 aa            linear   MAM 08-NOV-2023
DEFINITION  24-hydroxycholesterol 7-alpha-hydroxylase isoform 2 [Sus scrofa].
ACCESSION   NP_001302673 XP_013833455
VERSION     NP_001302673.2
DBSOURCE    REFSEQ: accession NM_001315744.2
KEYWORDS    RefSeq.
SOURCE      Sus scrofa (pig)
  ORGANISM  Sus scrofa
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae;
            Sus.
REFERENCE   1  (residues 1 to 45)
  AUTHORS   Uenishi H, Eguchi-Ogawa T, Shinkai H, Okumura N, Suzuki K, Toki D,
            Hamasima N and Awata T.
  TITLE     PEDE (Pig EST Data Explorer) has been expanded into Pig Expression
            Data Explorer, including 10 147 porcine full-length cDNA sequences
  JOURNAL   Nucleic Acids Res 35 (Database issue), D650-D653 (2007)
   PUBMED   17145712
REFERENCE   2  (residues 1 to 45)
  AUTHORS   Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H,
            Okumura N, Hamasima N and Awata T.
  TITLE     PEDE (Pig EST Data Explorer): construction of a database for ESTs
            derived from porcine full-length cDNA libraries
  JOURNAL   Nucleic Acids Res 32 (Database issue), D484-D488 (2004)
   PUBMED   14681463
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AEMK02000055.1.
            
            On Nov 8, 2023 this sequence version replaced NP_001302673.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: KP687248.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA103886111,
                                           SAMEA103886114 [ECO:0006172]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..45
                     /organism="Sus scrofa"
                     /db_xref="taxon:9823"
                     /chromosome="7"
                     /map="7"
                     /breed="Duroc"
     Protein         1..45
                     /product="24-hydroxycholesterol 7-alpha-hydroxylase
                     isoform 2"
                     /EC_number="1.14.14.26"
                     /note="cytochrome P450 39A1; cytochrome P450, family 39,
                     subfamily A, polypeptide 1"
                     /calculated_mol_wt=4557
     CDS             1..45
                     /gene="CYP39A1"
                     /coded_by="NM_001315744.2:114..251"
                     /note="isoform 2 is encoded by transcript variant 2"
                     /db_xref="GeneID:100113410"
                     /db_xref="VGNC:VGNC:103375"
ORIGIN      
        1 maeslggpld alfqtkgtst kaaglfasli qghagqkpwn sfpqq
//
LOCUS       NP_001033090             413 aa            linear   MAM 08-NOV-2023
DEFINITION  microphthalmia-associated transcription factor isoform 3 [Sus
            scrofa].
ACCESSION   NP_001033090 XP_003358545
VERSION     NP_001033090.1
DBSOURCE    REFSEQ: accession NM_001038001.2
KEYWORDS    RefSeq.
SOURCE      Sus scrofa (pig)
  ORGANISM  Sus scrofa
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae;
            Sus.
REFERENCE   1  (residues 1 to 413)
  AUTHORS   Hai T, Guo W, Yao J, Cao C, Luo A, Qi M, Wang X, Wang X, Huang J,
            Zhang Y, Zhang H, Wang D, Shang H, Hong Q, Zhang R, Jia Q, Zheng Q,
            Qin G, Li Y, Zhang T, Jin W, Chen ZY, Wang H, Zhou Q, Meng A, Wei
            H, Yang S and Zhao J.
  TITLE     Creation of miniature pig model of human Waardenburg syndrome type
            2A by ENU mutagenesis
  JOURNAL   Hum Genet 136 (11-12), 1463-1475 (2017)
   PUBMED   29094203
  REMARK    GeneRIF: Mutations in MITF gene is associated with Waardenburg
            syndrome type 2A .
REFERENCE   2  (residues 1 to 413)
  AUTHORS   Chen L, Guo W, Ren L, Yang M, Zhao Y, Guo Z, Yi H, Li M, Hu Y, Long
            X, Sun B, Li J, Zhai S, Zhang T, Tian S, Meng Q, Yu N, Zhu D, Tang
            G, Tang Q, Ren L, Liu K, Zhang S, Che T, Yu Z, Wu N, Jing L, Zhang
            R, Cong T, Chen S, Zhao Y, Zhang Y, Bai X, Guo Y, Zhao L, Zhang F,
            Zhao H, Zhang L, Hou Z, Zhao J, Li J, Zhang L, Sun W, Zou X, Wang
            T, Ge L, Liu Z, Hu X, Wang J, Yang S and Li N.
  TITLE     A de novo silencer causes elimination of MITF-M expression and
            profound hearing loss in pigs
  JOURNAL   BMC Biol 14, 52 (2016)
   PUBMED   27349893
  REMARK    GeneRIF: Elimination of the MITF-M isoform alone is sufficient to
            cause deafness and depigmentation.
            Publication Status: Online-Only
REFERENCE   3  (residues 1 to 413)
  AUTHORS   Bourneuf E, Du ZQ, Estelle J, Gilbert H, Crechet F, Piton G, Milan
            D, Geffrotin C, Lathrop M, Demenais F, Rogel-Gaillard C and
            Vincent-Naulleau S.
  TITLE     Genetic and functional evaluation of MITF as a candidate gene for
            cutaneous melanoma predisposition in pigs
  JOURNAL   Mamm Genome 22 (9-10), 602-612 (2011)
   PUBMED   21626174
  REMARK    GeneRIF: Although MITF does not seem to be the causal gene of the
            QTL initially observed, it can not be excluded that a prominent
            role of its transcription and function in the outbreak and
            evolution of the tumors observed in pigs.
REFERENCE   4  (residues 1 to 413)
  AUTHORS   Uenishi H, Eguchi-Ogawa T, Shinkai H, Okumura N, Suzuki K, Toki D,
            Hamasima N and Awata T.
  TITLE     PEDE (Pig EST Data Explorer) has been expanded into Pig Expression
            Data Explorer, including 10 147 porcine full-length cDNA sequences
  JOURNAL   Nucleic Acids Res 35 (Database issue), D650-D653 (2007)
   PUBMED   17145712
REFERENCE   5  (residues 1 to 413)
  AUTHORS   Okumura N, Hayashi T, Sekikawa H, Matsumoto T, Mikawa A, Hamasima N
            and Awata T.
  TITLE     Sequencing, mapping and nucleotide variation of porcine coat colour
            genes EDNRB, MYO5A, KITLG, SLC45A2, RAB27A, SILV and MITF
  JOURNAL   Anim Genet 37 (1), 80-82 (2006)
   PUBMED   16441305
REFERENCE   6  (residues 1 to 413)
  AUTHORS   Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H,
            Okumura N, Hamasima N and Awata T.
  TITLE     PEDE (Pig EST Data Explorer): construction of a database for ESTs
            derived from porcine full-length cDNA libraries
  JOURNAL   Nucleic Acids Res 32 (Database issue), D484-D488 (2004)
   PUBMED   14681463
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AEMK02000086.1.
            
            On Nov 5, 2011 this sequence version replaced XP_003358545.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AB209956.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA103886114, SAMEA103886124
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Sus scrofa"
                     /db_xref="taxon:9823"
                     /chromosome="13"
                     /map="13"
                     /breed="Duroc"
     Protein         1..413
                     /product="microphthalmia-associated transcription factor
                     isoform 3"
                     /note="microphtalmia-associated transcription factor;
                     microphthalmia-associated transcription factor;
                     melanogenesis associated transcription factor"
                     /calculated_mol_wt=46131
     Region          <9..87
                     /region_name="MITF_TFEB_C_3_N"
                     /note="MITF/TFEB/TFEC/TFE3 N-terminus; pfam15951"
                     /db_xref="CDD:464952"
     Region          187..290
                     /region_name="bHLHzip_MITF"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in microphthalmia-associated transcription factor
                     (MITF) and similar proteins; cd18926"
                     /db_xref="CDD:381496"
     Site            order(203..204,206..207,210..211,215,236..237)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381496"
     Site            order(213..214,217..218,220,224,237,241..242,245,247..249,
                     251..252,254..255,258,261..263)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381496"
     Region          284..403
                     /region_name="DUF3371"
                     /note="Domain of unknown function (DUF3371); pfam11851"
                     /db_xref="CDD:463372"
     CDS             1..413
                     /gene="MITF"
                     /coded_by="NM_001038001.2:89..1330"
                     /note="isoform 3 is encoded by transcript variant 3"
                     /db_xref="GeneID:414902"
                     /db_xref="VGNC:VGNC:90243"
ORIGIN      
        1 mlemleynhy qvqthlenpt kyhiqqaqrq qvkqylsttl ankhanqvls lpcpnqpgdh
       61 vmppvpgssa pnspmamltl nsncekegfy kfeeqnraes ecpsmnthsr ascmqmddvi
      121 ddiislessy neeilglmdp alqmantlpv sgnlidlygn qglpppglti snscpanlpn
      181 ikreltesea ralakerqkk dnhnlierrr rfnindrike lgtlipksnd pdmrwnkgti
      241 lkasvdyirk lqreqqrake lenrqkkleh anrhlllriq elemqarahg lslipstglc
      301 spdlvnriik qeptlencsq dllqhhadlt ctttldltdg titfnnnlgt gsegnpaysv
      361 ptkmgskled ilmddtlspv gitdpllssv spgasktssr rssmsmeete hac
//
LOCUS       NP_001412213             520 aa            linear   MAM 08-NOV-2023
DEFINITION  microphthalmia-associated transcription factor isoform 1 [Sus
            scrofa].
ACCESSION   NP_001412213 XP_020924244
VERSION     NP_001412213.1
DBSOURCE    REFSEQ: accession NM_001425284.1
KEYWORDS    RefSeq.
SOURCE      Sus scrofa (pig)
  ORGANISM  Sus scrofa
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae;
            Sus.
REFERENCE   1  (residues 1 to 520)
  AUTHORS   Hai T, Guo W, Yao J, Cao C, Luo A, Qi M, Wang X, Wang X, Huang J,
            Zhang Y, Zhang H, Wang D, Shang H, Hong Q, Zhang R, Jia Q, Zheng Q,
            Qin G, Li Y, Zhang T, Jin W, Chen ZY, Wang H, Zhou Q, Meng A, Wei
            H, Yang S and Zhao J.
  TITLE     Creation of miniature pig model of human Waardenburg syndrome type
            2A by ENU mutagenesis
  JOURNAL   Hum Genet 136 (11-12), 1463-1475 (2017)
   PUBMED   29094203
  REMARK    GeneRIF: Mutations in MITF gene is associated with Waardenburg
            syndrome type 2A .
REFERENCE   2  (residues 1 to 520)
  AUTHORS   Chen L, Guo W, Ren L, Yang M, Zhao Y, Guo Z, Yi H, Li M, Hu Y, Long
            X, Sun B, Li J, Zhai S, Zhang T, Tian S, Meng Q, Yu N, Zhu D, Tang
            G, Tang Q, Ren L, Liu K, Zhang S, Che T, Yu Z, Wu N, Jing L, Zhang
            R, Cong T, Chen S, Zhao Y, Zhang Y, Bai X, Guo Y, Zhao L, Zhang F,
            Zhao H, Zhang L, Hou Z, Zhao J, Li J, Zhang L, Sun W, Zou X, Wang
            T, Ge L, Liu Z, Hu X, Wang J, Yang S and Li N.
  TITLE     A de novo silencer causes elimination of MITF-M expression and
            profound hearing loss in pigs
  JOURNAL   BMC Biol 14, 52 (2016)
   PUBMED   27349893
  REMARK    GeneRIF: Elimination of the MITF-M isoform alone is sufficient to
            cause deafness and depigmentation.
            Publication Status: Online-Only
REFERENCE   3  (residues 1 to 520)
  AUTHORS   Bourneuf E, Du ZQ, Estelle J, Gilbert H, Crechet F, Piton G, Milan
            D, Geffrotin C, Lathrop M, Demenais F, Rogel-Gaillard C and
            Vincent-Naulleau S.
  TITLE     Genetic and functional evaluation of MITF as a candidate gene for
            cutaneous melanoma predisposition in pigs
  JOURNAL   Mamm Genome 22 (9-10), 602-612 (2011)
   PUBMED   21626174
  REMARK    GeneRIF: Although MITF does not seem to be the causal gene of the
            QTL initially observed, it can not be excluded that a prominent
            role of its transcription and function in the outbreak and
            evolution of the tumors observed in pigs.
REFERENCE   4  (residues 1 to 520)
  AUTHORS   Uenishi H, Eguchi-Ogawa T, Shinkai H, Okumura N, Suzuki K, Toki D,
            Hamasima N and Awata T.
  TITLE     PEDE (Pig EST Data Explorer) has been expanded into Pig Expression
            Data Explorer, including 10 147 porcine full-length cDNA sequences
  JOURNAL   Nucleic Acids Res 35 (Database issue), D650-D653 (2007)
   PUBMED   17145712
REFERENCE   5  (residues 1 to 520)
  AUTHORS   Okumura N, Hayashi T, Sekikawa H, Matsumoto T, Mikawa A, Hamasima N
            and Awata T.
  TITLE     Sequencing, mapping and nucleotide variation of porcine coat colour
            genes EDNRB, MYO5A, KITLG, SLC45A2, RAB27A, SILV and MITF
  JOURNAL   Anim Genet 37 (1), 80-82 (2006)
   PUBMED   16441305
REFERENCE   6  (residues 1 to 520)
  AUTHORS   Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H,
            Okumura N, Hamasima N and Awata T.
  TITLE     PEDE (Pig EST Data Explorer): construction of a database for ESTs
            derived from porcine full-length cDNA libraries
  JOURNAL   Nucleic Acids Res 32 (Database issue), D484-D488 (2004)
   PUBMED   14681463
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AEMK02000086.1.
            
            On Nov 8, 2023 this sequence version replaced XP_020924244.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5012866.59600.1,
                                           SRR5012866.170522.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA103886111, SAMEA103886112
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Sus scrofa"
                     /db_xref="taxon:9823"
                     /chromosome="13"
                     /map="13"
                     /breed="Duroc"
     Protein         1..520
                     /product="microphthalmia-associated transcription factor
                     isoform 1"
                     /note="microphtalmia-associated transcription factor;
                     microphthalmia-associated transcription factor;
                     melanogenesis associated transcription factor"
                     /calculated_mol_wt=58016
     Region          56..194
                     /region_name="MITF_TFEB_C_3_N"
                     /note="MITF/TFEB/TFEC/TFE3 N-terminus; pfam15951"
                     /db_xref="CDD:464952"
     Region          294..397
                     /region_name="bHLHzip_MITF"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in microphthalmia-associated transcription factor
                     (MITF) and similar proteins; cd18926"
                     /db_xref="CDD:381496"
     Site            order(310..311,313..314,317..318,322,343..344)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381496"
     Site            order(320..321,324..325,327,331,344,348..349,352,354..356,
                     358..359,361..362,365,368..370)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381496"
     Region          391..510
                     /region_name="DUF3371"
                     /note="Domain of unknown function (DUF3371); pfam11851"
                     /db_xref="CDD:463372"
     CDS             1..520
                     /gene="MITF"
                     /coded_by="NM_001425284.1:140..1702"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /db_xref="GeneID:414902"
                     /db_xref="VGNC:VGNC:90243"
ORIGIN      
        1 mqsesgivpd fevgeefhee pktyyelksq plksssseeh pgaskppiss ssmtsrillr
       61 qqlmreqmqe qerreqqqkl qaaqfmqqrv pvsptpainv svpttlpsat qvpmevlkvq
      121 thlenptkyh iqqaqrqqvk qylsttlank hanqvlslpc pnqpgdhvmp pvpgssapns
      181 pmamltlnsn cekegfykfe eqnraesecp smnthsrasc mqmddviddi islessynee
      241 ilglmdpalq mantlpvsgn lidlygnqgl pppgltisns cpanlpnikr eltesearal
      301 akerqkkdnh nlierrrrfn indrikelgt lipksndpdm rwnkgtilka svdyirklqr
      361 eqqrakelen rqkklehanr hlllriqele mqarahglsl ipstglcspd lvnriikqep
      421 tlencsqdll qhhadltctt tldltdgtit fnnnlgtgse gnpaysvptk mgskledilm
      481 ddtlspvgit dpllssvspg asktssrrss msmeetehac
//
LOCUS       NP_001302711             510 aa            linear   MAM 08-NOV-2023
DEFINITION  microphthalmia-associated transcription factor isoform 2 [Sus
            scrofa].
ACCESSION   NP_001302711 XP_020924245
VERSION     NP_001302711.2
DBSOURCE    REFSEQ: accession NM_001315782.2
KEYWORDS    RefSeq.
SOURCE      Sus scrofa (pig)
  ORGANISM  Sus scrofa
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae;
            Sus.
REFERENCE   1  (residues 1 to 510)
  AUTHORS   Hai T, Guo W, Yao J, Cao C, Luo A, Qi M, Wang X, Wang X, Huang J,
            Zhang Y, Zhang H, Wang D, Shang H, Hong Q, Zhang R, Jia Q, Zheng Q,
            Qin G, Li Y, Zhang T, Jin W, Chen ZY, Wang H, Zhou Q, Meng A, Wei
            H, Yang S and Zhao J.
  TITLE     Creation of miniature pig model of human Waardenburg syndrome type
            2A by ENU mutagenesis
  JOURNAL   Hum Genet 136 (11-12), 1463-1475 (2017)
   PUBMED   29094203
  REMARK    GeneRIF: Mutations in MITF gene is associated with Waardenburg
            syndrome type 2A .
REFERENCE   2  (residues 1 to 510)
  AUTHORS   Chen L, Guo W, Ren L, Yang M, Zhao Y, Guo Z, Yi H, Li M, Hu Y, Long
            X, Sun B, Li J, Zhai S, Zhang T, Tian S, Meng Q, Yu N, Zhu D, Tang
            G, Tang Q, Ren L, Liu K, Zhang S, Che T, Yu Z, Wu N, Jing L, Zhang
            R, Cong T, Chen S, Zhao Y, Zhang Y, Bai X, Guo Y, Zhao L, Zhang F,
            Zhao H, Zhang L, Hou Z, Zhao J, Li J, Zhang L, Sun W, Zou X, Wang
            T, Ge L, Liu Z, Hu X, Wang J, Yang S and Li N.
  TITLE     A de novo silencer causes elimination of MITF-M expression and
            profound hearing loss in pigs
  JOURNAL   BMC Biol 14, 52 (2016)
   PUBMED   27349893
  REMARK    GeneRIF: Elimination of the MITF-M isoform alone is sufficient to
            cause deafness and depigmentation.
            Publication Status: Online-Only
REFERENCE   3  (residues 1 to 510)
  AUTHORS   Bourneuf E, Du ZQ, Estelle J, Gilbert H, Crechet F, Piton G, Milan
            D, Geffrotin C, Lathrop M, Demenais F, Rogel-Gaillard C and
            Vincent-Naulleau S.
  TITLE     Genetic and functional evaluation of MITF as a candidate gene for
            cutaneous melanoma predisposition in pigs
  JOURNAL   Mamm Genome 22 (9-10), 602-612 (2011)
   PUBMED   21626174
  REMARK    GeneRIF: Although MITF does not seem to be the causal gene of the
            QTL initially observed, it can not be excluded that a prominent
            role of its transcription and function in the outbreak and
            evolution of the tumors observed in pigs.
REFERENCE   4  (residues 1 to 510)
  AUTHORS   Uenishi H, Eguchi-Ogawa T, Shinkai H, Okumura N, Suzuki K, Toki D,
            Hamasima N and Awata T.
  TITLE     PEDE (Pig EST Data Explorer) has been expanded into Pig Expression
            Data Explorer, including 10 147 porcine full-length cDNA sequences
  JOURNAL   Nucleic Acids Res 35 (Database issue), D650-D653 (2007)
   PUBMED   17145712
REFERENCE   5  (residues 1 to 510)
  AUTHORS   Okumura N, Hayashi T, Sekikawa H, Matsumoto T, Mikawa A, Hamasima N
            and Awata T.
  TITLE     Sequencing, mapping and nucleotide variation of porcine coat colour
            genes EDNRB, MYO5A, KITLG, SLC45A2, RAB27A, SILV and MITF
  JOURNAL   Anim Genet 37 (1), 80-82 (2006)
   PUBMED   16441305
REFERENCE   6  (residues 1 to 510)
  AUTHORS   Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H,
            Okumura N, Hamasima N and Awata T.
  TITLE     PEDE (Pig EST Data Explorer): construction of a database for ESTs
            derived from porcine full-length cDNA libraries
  JOURNAL   Nucleic Acids Res 32 (Database issue), D484-D488 (2004)
   PUBMED   14681463
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AEMK02000086.1.
            
            On or before Nov 8, 2023 this sequence version replaced
            XP_020924245.1, NP_001302711.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: GU097382.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA103886112, SAMEA103886114
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Sus scrofa"
                     /db_xref="taxon:9823"
                     /chromosome="13"
                     /map="13"
                     /breed="Duroc"
     Protein         1..510
                     /product="microphthalmia-associated transcription factor
                     isoform 2"
                     /note="microphtalmia-associated transcription factor;
                     microphthalmia-associated transcription factor;
                     melanogenesis associated transcription factor"
                     /calculated_mol_wt=56898
     Region          40..178
                     /region_name="MITF_TFEB_C_3_N"
                     /note="MITF/TFEB/TFEC/TFE3 N-terminus; pfam15951"
                     /db_xref="CDD:464952"
     Region          284..387
                     /region_name="bHLHzip_MITF"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in microphthalmia-associated transcription factor
                     (MITF) and similar proteins; cd18926"
                     /db_xref="CDD:381496"
     Site            order(300..301,303..304,307..308,312,333..334)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381496"
     Site            order(310..311,314..315,317,321,334,338..339,342,344..346,
                     348..349,351..352,355,358..360)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381496"
     Region          381..500
                     /region_name="DUF3371"
                     /note="Domain of unknown function (DUF3371); pfam11851"
                     /db_xref="CDD:463372"
     CDS             1..510
                     /gene="MITF"
                     /coded_by="NM_001315782.2:64..1596"
                     /note="isoform 2 is encoded by transcript variant 2"
                     /db_xref="GeneID:414902"
                     /db_xref="VGNC:VGNC:90243"
ORIGIN      
        1 mealrvqmfm pcsfeslyls seehpgaskp pissssmtsr illrqqlmre qmqeqerreq
       61 qqklqaaqfm qqrvpvsptp ainvsvpttl psatqvpmev lkvqthlenp tkyhiqqaqr
      121 qqvkqylstt lankhanqvl slpcpnqpgd hvmppvpgss apnspmamlt lnsncekegf
      181 ykfeeqnrae secpsmnths rascmqmddv iddiisless yneeilglmd palqmantlp
      241 vsgnlidlyg nqglpppglt isnscpanlp nikreltaci fptesearal akerqkkdnh
      301 nlierrrrfn indrikelgt lipksndpdm rwnkgtilka svdyirklqr eqqrakelen
      361 rqkklehanr hlllriqele mqarahglsl ipstglcspd lvnriikqep tlencsqdll
      421 qhhadltctt tldltdgtit fnnnlgtgse gnpaysvptk mgskledilm ddtlspvgit
      481 dpllssvspg asktssrrss msmeetehac
//
LOCUS       NP_001162539             490 aa            linear   PRI 08-NOV-2023
DEFINITION  katanin p60 ATPase-containing subunit A-like 1 [Papio anubis].
ACCESSION   NP_001162539
VERSION     NP_001162539.1
DBSOURCE    REFSEQ: accession NM_001169068.1
KEYWORDS    RefSeq.
SOURCE      Papio anubis (olive baboon)
  ORGANISM  Papio anubis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Cercopithecidae; Cercopithecinae; Papio.
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from DP000511.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN02045697,
                              SAMN02045698 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Papio anubis"
                     /db_xref="taxon:9555"
                     /chromosome="15"
                     /map="15"
     Protein         1..490
                     /product="katanin p60 ATPase-containing subunit A-like 1"
                     /EC_number="5.6.1.1"
                     /note="p60 katanin-like 1"
                     /calculated_mol_wt=55181
     Site            1
                     /site_type="acetylation"
                     /note="N-acetylmethionine.
                     /evidence=ECO:0000250|UniProtKB:Q9BW62; propagated from
                     UniProtKB/Swiss-Prot (A9RA82.1)"
     Region          4..72
                     /region_name="Kp60-NTD"
                     /note="N-terminal domain (NTD) found in katanin p60 (Kp60)
                     ATPase-containing subunit A1, and similar proteins;
                     cd21748"
                     /db_xref="CDD:439297"
     Site            order(7,14,17..20,22,29,51,55,58..59,61..62,65..66,68..69,
                     72)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:439297"
     Region          95..184
                     /region_name="Disordered.
                     /evidence=ECO:0000256|SAM:MobiDB-lite"
                     /note="propagated from UniProtKB/Swiss-Prot (A9RA82.1)"
     Site            174
                     /site_type="phosphorylation"
                     /note="Phosphoserine.
                     /evidence=ECO:0000250|UniProtKB:Q5XIK7; propagated from
                     UniProtKB/Swiss-Prot (A9RA82.1)"
     Region          209..378
                     /region_name="RecA-like_KTNA1"
                     /note="Katanin p60 ATPase-containing subunit A1; cd19522"
                     /db_xref="CDD:410930"
     Site            order(210..213,250..256)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:410930"
     Region          402..446
                     /region_name="AAA_lid_3"
                     /note="AAA+ lid domain; pfam17862"
                     /db_xref="CDD:465537"
     Region          <450..488
                     /region_name="Vps4_C"
                     /note="Vps4 C terminal oligomerization domain; pfam09336"
                     /db_xref="CDD:462762"
     CDS             1..490
                     /gene="KATNAL1"
                     /coded_by="NM_001169068.1:1..1473"
                     /db_xref="GeneID:100137574"
ORIGIN      
        1 mnlaeicdna kkgreyallg nydssmvyyq gviqqiqrhc qsvrdpaikg kwqqvrqell
       61 eeyeqvksiv stlesfkidr ppdfpvscqd epfrdpavwp ppvpaehrap pqirrpnrev
      121 rplrkemagv gargpvgrah pisksekpst srdkdcrarg rddkgrknmq dgasdgempk
      181 fdgagydkdl vealerdivs rnpsihwddi adleeakkll reavvlpmwm pdffkgirrp
      241 wkgvlmvgpp gtgktmlaka vatecgttff nvssstltsk yrgeseklvr llfemarfya
      301 pttifideid sicsrrgtsd eheasrrvks elliqmdgvg galenddpsk mvmvlaatnf
      361 pwdidealrr rlekriyipl ptakgraell kinlreveld pdiqlediae kiegysgadi
      421 tnvcrdaslm amrrringlg peeiralske elqmpvtkgd felalkkiak svsaadleky
      481 ekwmvefgsa
//
LOCUS       NP_001116122             278 aa            linear   MAM 08-NOV-2023
DEFINITION  thyroxine 5-deiodinase [Ovis aries].
ACCESSION   NP_001116122
VERSION     NP_001116122.1
DBSOURCE    REFSEQ: accession NM_001122650.1
KEYWORDS    RefSeq.
SOURCE      Ovis aries (sheep)
  ORGANISM  Ovis aries
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Bovidae; Caprinae; Ovis.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AY656759.1.
            
            ##RefSeq-Attributes-START##
            protein contains selenocysteine :: inferred from conservation
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Ovis aries"
                     /db_xref="taxon:9940"
                     /chromosome="18"
                     /map="18"
     Protein         1..278
                     /product="thyroxine 5-deiodinase"
                     /EC_number="1.21.99.3"
                     /note="type 3 iodothyronine deiodinase; Type 3 DI;
                     Type-III 5'-deiodinase; Type III iodothyronine deiodinase;
                     deiodinase, iodothyronine type III"
                     /calculated_mol_wt=31445
     Region          13..267
                     /region_name="T4_deiodinase"
                     /note="Iodothyronine deiodinase; pfam00837"
                     /db_xref="CDD:279210"
     Site            144
                     /site_type="other"
                     /note="Selenocysteine"
     CDS             1..278
                     /gene="DIO3"
                     /gene_synonym="5DIII; DIOIII"
                     /coded_by="NM_001122650.1:1..837"
                     /note="similar to Homo sapiens and Mus musculus type 3
                     iodothyronine deiodinases in GenBank Accession Numbers
                     S79854 and AF426023, respectively; also similar to Sus
                     scrofa type III iodothyronine deiodinase"
                     /db_xref="GeneID:100142657"
ORIGIN      
        1 mlrslllhsl rlcaqtascl vlfprflgta fmlwlldflc irkhllgrrr rgqpeievel
       61 nsdgeevppd dppvcvsddn rlctlaslra vwhgqkldff kqaheggpap nsevvlpdgf
      121 qnqhildyar gnrplvlnfg sctuppfmar msafqrlvtk yqrdvdflii yieeahpsdg
      181 wvttdspysi pqhrsledrv saarvlqqga pecalvldtm tnssssayga yferlyiiqs
      241 gtimyqggrg pdgyqvselr twlerydeql hgpqprrv
//
LOCUS       NP_001102447             977 aa            linear   ROD 08-NOV-2023
DEFINITION  ephrin type-A receptor 2 precursor [Rattus norvegicus].
ACCESSION   NP_001102447 XP_001072610 XP_345597
VERSION     NP_001102447.1
DBSOURCE    REFSEQ: accession NM_001108977.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (residues 1 to 977)
  AUTHORS   Ren L, Zhu X, Tan J, Lv X, Wang J and Hua F.
  TITLE     MiR-210 promotes bone formation in ovariectomized rats by
            regulating osteogenic/adipogenic differentiation of bone marrow
            mesenchymal stem cells through downregulation of EPHA2
  JOURNAL   J Orthop Surg Res 18 (1), 811 (2023)
   PUBMED   37904187
  REMARK    GeneRIF: MiR-210 promotes bone formation in ovariectomized rats by
            regulating osteogenic/adipogenic differentiation of bone marrow
            mesenchymal stem cells through downregulation of EPHA2.
            Publication Status: Online-Only
REFERENCE   2  (residues 1 to 977)
  AUTHORS   Han X, Zhu Y, Shen L, Zhou Y, Pang L, Zhou W, Gu H, Han K, Yang Y,
            Jiang C, Xie J, Zhang C and Ding L.
  TITLE     PTIP Inhibits Cell Invasion in Esophageal Squamous Cell Carcinoma
            via Modulation of EphA2 Expression
  JOURNAL   Front Oncol 11, 629916 (2021)
   PUBMED   33833989
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 977)
  AUTHORS   Zhao Y, Li W, Song J, Zhang M, Huang T and Wei X.
  TITLE     High expression of EphA2 led to secondary injury by destruction of
            BBB integrity though the ROCK pathway after diffuse axonal injury
  JOURNAL   Neurosci Lett 736, 135234 (2020)
   PUBMED   32721428
  REMARK    GeneRIF: High expression of EphA2 led to secondary injury by
            destruction of BBB integrity though the ROCK pathway after diffuse
            axonal injury.
REFERENCE   4  (residues 1 to 977)
  AUTHORS   Feng G, Sun B, Liu HX, Liu QH, Zhao L and Wang TL.
  TITLE     EphA2 antagonism alleviates LPS-induced acute lung injury via
            Nrf2/HO-1, TLR4/MyD88 and RhoA/ROCK pathways
  JOURNAL   Int Immunopharmacol 72, 176-185 (2019)
   PUBMED   30986645
  REMARK    GeneRIF: Our data indicate that EphA2 receptor plays an essential
            role in LPS-induced acute lung injury (ALI) and EphA2 antagonism
            has protective effects against LPS-induced ALI via Nrf2/HO-1,
            TLR4/MyD88 and RhoA/ROCK pathways.  These results suggest that
            antagonism of EphA2 may be an effective therapeutic strategy for
            the treatment of ALI.
REFERENCE   5  (residues 1 to 977)
  AUTHORS   Li G, Huang M, Cai Y, Ke Y, Yang Y and Sun X.
  TITLE     miR-141 inhibits glioma vasculogenic mimicry by controlling EphA2
            expression
  JOURNAL   Mol Med Rep 18 (2), 1395-1404 (2018)
   PUBMED   29901110
  REMARK    GeneRIF: miR-141 inhibits glioma neovascularization by controlling
            EphA2 expression.
REFERENCE   6  (residues 1 to 977)
  AUTHORS   Tanaka M, Ohashi R, Nakamura R, Shinmura K, Kamo T, Sakai R and
            Sugimura H.
  TITLE     Tiam1 mediates neurite outgrowth induced by ephrin-B1 and EphA2
  JOURNAL   EMBO J 23 (5), 1075-1088 (2004)
   PUBMED   14988728
REFERENCE   7  (residues 1 to 977)
  AUTHORS   Dobrzanski P, Hunter K, Jones-Bolin S, Chang H, Robinson C,
            Pritchard S, Zhao H and Ruggeri B.
  TITLE     Antiangiogenic and antitumor efficacy of EphA2 receptor antagonist
  JOURNAL   Cancer Res 64 (3), 910-919 (2004)
   PUBMED   14871820
REFERENCE   8  (residues 1 to 977)
  AUTHORS   Biervert C, Horvath E and Fahrig T.
  TITLE     Semiquantitative expression analysis of ephrine-receptor tyrosine
            kinase mRNA's in a rat model of traumatic brain injury
  JOURNAL   Neurosci Lett 315 (1-2), 25-28 (2001)
   PUBMED   11711206
REFERENCE   9  (residues 1 to 977)
  AUTHORS   Naruse-Nakajima C, Asano M and Iwakura Y.
  TITLE     Involvement of EphA2 in the formation of the tail notochord via
            interaction with ephrinA1
  JOURNAL   Mech Dev 102 (1-2), 95-105 (2001)
   PUBMED   11287184
REFERENCE   10 (residues 1 to 977)
  AUTHORS   Miao H, Burnett E, Kinch M, Simon E and Wang B.
  TITLE     Activation of EphA2 kinase suppresses integrin function and causes
            focal-adhesion-kinase dephosphorylation
  JOURNAL   Nat Cell Biol 2 (2), 62-69 (2000)
   PUBMED   10655584
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473968.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XP_345597.3, XP_001072610.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5756307,
                              SAMEA5760384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..977
                     /organism="Rattus norvegicus"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     Protein         1..977
                     /product="ephrin type-A receptor 2 precursor"
                     /EC_number="2.7.10.1"
                     /note="ephrin receptor EphA2; ephrin type-A receptor 2"
                     /calculated_mol_wt=106751
     sig_peptide     1..19
                     /inference="COORDINATES: ab initio prediction:SignalP:4.0"
                     /calculated_mol_wt=2009
     Region          27..200
                     /region_name="EphR_LBD_A2"
                     /note="Ligand Binding Domain of Ephrin type-A Receptor 2;
                     cd10480"
                     /db_xref="CDD:198448"
     Site            order(52,54..58,60,62,64..65,67..69,72,100,102,107,150,
                     154..155,158..160,187..189,191)
                     /site_type="other"
                     /note="ephrin binding site [polypeptide binding]"
                     /db_xref="CDD:198448"
     Site            128..132
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:198448"
     Site            order(330,405,418)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          331..419
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     Site            order(419..420,422..423)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          439..520
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     Site            order(516..517,519..520)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          <570..611
                     /region_name="EphA2_TM"
                     /note="Ephrin type-A receptor 2 transmembrane domain;
                     pfam14575"
                     /db_xref="CDD:464211"
     Region          608..876
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(620..623,626,628,645,647,677,693..696,740,744..745,
                     747,757..758)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:133194"
     Region          903..972
                     /region_name="SAM_EPH-A2"
                     /note="SAM domain of EPH-A2 family of tyrosine kinase
                     receptors; cd09543"
                     /db_xref="CDD:188942"
     Site            order(918,942,957..958,961)
                     /site_type="other"
                     /note="heterodimer interface EH [polypeptide binding]"
                     /db_xref="CDD:188942"
     Site            order(922,955)
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:188942"
     CDS             1..977
                     /gene="Epha2"
                     /coded_by="NM_001108977.1:111..3044"
                     /db_xref="GeneID:366492"
                     /db_xref="RGD:1307204"
ORIGIN      
        1 mklraagfcl allwgcalaa aaaqgkevvl ldfaamkgel gwlthpygkg wdlmqnimnd
       61 mpiymysvcn vvsgdqdnwl rtnwvyreea erifielkft vrdcnsfpgg asscketfnl
      121 yyaesdvdyg tnfqkrqftk idtiapdeit vssdfearnv klnveermvg pltrkgfyla
      181 fqdigacval lsvrvyykkc pemlqslarf petiavavsd aqplatvagt cvdhavvpyg
      241 gegplmhctv dgewlvpigq clcqegyekv edacqacspg ffkseasesp clqcpehtlp
      301 stegatscqc eegyfraped plsmpctrpp saphyltaig mgakvelrwt apqdtggrkd
      361 ivysvtceqc wpesgecgsc easvqysepp qaltrtsvtv sdlephmnyt ftvearngvs
      421 dlvnsrsfrt asvsinqtep pkvrledrst tslsvawsip vpqqsrvwky evtyrkkgda
      481 nsynvhrtdg fsvtldglap gttylvqvqa ltqegqgags kvhefqtlst egsatmavig
      541 gvavgvvlll vlagigffih rrrrnlrarq ssedvyfsks eqlkplktyv dphtyedpnq
      601 avlkftteih pscvsrqkvi gagefgevyk gtlksssgkk eipvaiktlk agytekqrvd
      661 flseasimgq fshhniirle gvvskykpmm iiteymenga ldkflrekdg efsvlqlvgm
      721 lrgiasgmky lanmnyvhrd laarnilvns nlvckvsdfg lsrvleddpe atyttsggki
      781 pirwtapeai syrkftsasd vwsygivmwe vmtygerpyw elsnhevmka indgfrlptp
      841 mdcpsaiyql mmqcwqqers rrpkfadivs ildklirapd slktladfdp rvsirlpsts
      901 gsegvpfrtv sewlesikmq qytehfmvag ytaiekvvqm snddikrigv rlpghqkria
      961 ysllglkdqv ntvgipi
//
LOCUS       NP_001272636             658 aa            linear   MAM 09-NOV-2023
DEFINITION  broad substrate specificity ATP-binding cassette transporter ABCG2
            [Capra hircus].
ACCESSION   NP_001272636 XP_005681503 XP_005681504 XP_005681505
VERSION     NP_001272636.1
DBSOURCE    REFSEQ: accession NM_001285707.1
KEYWORDS    RefSeq.
SOURCE      Capra hircus (goat)
  ORGANISM  Capra hircus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Bovidae; Caprinae; Capra.
REFERENCE   1  (residues 1 to 658)
  AUTHORS   Guerreiro DD, de Lima LF, Mbemya GT, Maside CM, Miranda AM, Tavares
            KCS, Alves BG, Faustino LR, Smitz J, de Figueiredo JR and Rodrigues
            APR.
  TITLE     ATP-binding cassette (ABC) transporters in caprine preantral
            follicles: gene and protein expression
  JOURNAL   Cell Tissue Res 372 (3), 611-620 (2018)
   PUBMED   29488001
  REMARK    GeneRIF: goat ovarian tissue expresses mRNA for the ABCB1, ABCC2
            and ABCG2 transporters and the expression of these proteins in the
            preantral follicles is a follicle-dependent stage.
REFERENCE   2  (residues 1 to 658)
  AUTHORS   Wassermann L, Halwachs S, Lindner S, Honscha KU and Honscha W.
  TITLE     Determination of functional ABCG2 activity and assessment of
            drug-ABCG2 interactions in dairy animals using a novel MDCKII in
            vitro model
  JOURNAL   J Pharm Sci 102 (2), 772-784 (2013)
   PUBMED   23192864
  REMARK    GeneRIF: Generated cell culture model allows rapid and
            high-throughput screening of potential ruminant ABCG2 substrate,
            increasing the understanding of carrier-associated secretion of
            xenobiotics into milk.
REFERENCE   3  (residues 1 to 658)
  AUTHORS   Wu HJ, Luo J, Wu N, Matand K, Zhang LJ, Han XF and Yang BJ.
  TITLE     Cloning, sequence and functional analysis of goat ATP-binding
            cassette transporter G2 (ABCG2)
  JOURNAL   Mol Biotechnol 39 (1), 21-27 (2008)
   PUBMED   18256940
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from GQ241418.1.
            
            On or before Oct 26, 2013 this sequence version replaced
            XP_005681503.1, XP_005681504.1, XP_005681505.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: GQ241418.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01831861, SAMN01831862
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..658
                     /organism="Capra hircus"
                     /db_xref="taxon:9925"
                     /chromosome="6"
                     /map="6"
     Protein         1..658
                     /product="broad substrate specificity ATP-binding cassette
                     transporter ABCG2"
                     /EC_number="7.6.2.2"
                     /note="breast cancer resistance protein; ATP-binding
                     cassette sub-family G member 2; ATP binding cassette
                     subfamily G member 2 (Junior blood group)"
                     /calculated_mol_wt=73053
     Region          56..652
                     /region_name="3a01204"
                     /note="The Eye Pigment Precursor Transporter (EPP) Family
                     protein; TIGR00955"
                     /db_xref="CDD:273361"
     CDS             1..658
                     /gene="ABCG2"
                     /coded_by="NM_001285707.1:150..2126"
                     /db_xref="GeneID:100860857"
ORIGIN      
        1 mlkmssnsye vsipmskkpn gipettskdl qtltegavls fhdicyrvkv ktgfllcrkt
       61 iekeilanin gvmkpglnai lgptgggkss lldilaarkd phglsgdvli ngaprpanfk
      121 cnsgyvvqdd vvmgtltvre nlqfsaalrl pttmtnyekn erinkviqel gldkvadskv
      181 gtqfirgvsg gerkrtsiam elitdpsilf ldepttglds stanavllll krmskqgrti
      241 ifsihqprys ifklfdsltl lasgrlmfhg paqealgyfe digfhcepyn npadffldii
      301 ngdssavvln redsddeake teepskndts lieklaefyv nssffketkv eldkfsgeqr
      361 rkklssykei tyatsfchql kwiskrsfkn llgnpqasia qlivtvflgl vigaifydlk
      421 ndpsgiqnra gvlfflttnq cfssvsavel lvvekklfih eyisgyyrvs syffgkllsd
      481 llpmrmlpsi iftcityfll glkpkveaff immftlmmva ysassmalai aagqsvvsia
      541 tllmtisfvf mmifsgllvn lktigawlsw lqylsipryg yaalqhnefl gqnfcpglnv
      601 tanntcsyai ctgeefltnq gidispwglw knhvalacmi vifltiaylk llflkkfs
//
LOCUS       NP_001277803             658 aa            linear   MAM 09-NOV-2023
DEFINITION  broad substrate specificity ATP-binding cassette transporter ABCG2
            [Bubalus bubalis].
ACCESSION   NP_001277803
VERSION     NP_001277803.1
DBSOURCE    REFSEQ: accession NM_001290874.1
KEYWORDS    RefSeq.
SOURCE      Bubalus bubalis (water buffalo)
  ORGANISM  Bubalus bubalis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Bovidae; Bovinae; Bubalus.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from HQ713395.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: HQ713395.1, JU765783.1 [ECO:0000332]
            RNAseq introns              :: mixed/partial sample support
                                           SAMEA1968690, SAMEA2142479
                                           [ECO:0000350]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..658
                     /organism="Bubalus bubalis"
                     /db_xref="taxon:89462"
                     /chromosome="7"
                     /map="7"
     Protein         1..658
                     /product="broad substrate specificity ATP-binding cassette
                     transporter ABCG2"
                     /EC_number="7.6.2.2"
                     /note="ATP-binding cassette sub-family G (WHITE) member 2;
                     ATP binding cassette superfamily G member 2 transporter;
                     breast cancer resistance protein; ATP binding cassette
                     subfamily G member 2 (Junior blood group)"
                     /calculated_mol_wt=72854
     Region          56..652
                     /region_name="3a01204"
                     /note="The Eye Pigment Precursor Transporter (EPP) Family
                     protein; TIGR00955"
                     /db_xref="CDD:273361"
     CDS             1..658
                     /gene="ABCG2"
                     /coded_by="NM_001290874.1:1..1977"
                     /db_xref="GeneID:102403900"
ORIGIN      
        1 mlkmssnsye vsipmskktn gipettskdl qtltegavls fhnicyrvkv ktgfllcrkt
       61 iekeilanin gvmkpglnai lgptgggkss lldilaarkd phglsgdvli ngaprpanfk
      121 cnsgyvvqdd vvmgtltvre nlqfsaalrl pttmtsyekn erinkviqel gldkvadskv
      181 gtqfirgvsg gerkrtsiam elitdpsilf ldeptgglds stadavllll krmskqgrti
      241 ifsihqprys ifklfdsltl lasgrlmfhg paqealgyfg aigfhcepyn npadffldii
      301 ngdssavvln redigdeane teepskkdtp lieklaefyi nssffketkv eldkfsgdqr
      361 rnklssykev tyatsfchql kwisrrsfkn llgnpqasia qlivtvflgl vigaifydlk
      421 ndpagiqnra gvlfflttnq cfssvsavel lvvekklfih eyisgyyrvs syffgkllsd
      481 llpmrmlpsi iftcityfll glkpkveaff immltlmiva ysassmalai aagqsvvsia
      541 tllmtisfvf mmifsgllvn lktvvswlsw lqylsipryg yaalqhnefl gqnfcpglnv
      601 ttnntcsyai ctgeefltnq gidispwglw knhvalacmi vifltiaylk llflkkfs
//
LOCUS       NP_001074207             716 aa            linear   MAM 10-NOV-2023
DEFINITION  leucine-rich repeat neuronal protein 1 precursor [Bos taurus].
ACCESSION   NP_001074207 XP_588383
VERSION     NP_001074207.1
DBSOURCE    REFSEQ: accession NM_001080738.1
KEYWORDS    RefSeq.
SOURCE      Bos taurus (domestic cattle)
  ORGANISM  Bos taurus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Bovidae; Bovinae; Bos.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from EF093509.1.
            
            On Jan 23, 2007 this sequence version replaced XP_588383.1.
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Bos taurus"
                     /db_xref="taxon:9913"
                     /chromosome="22"
                     /map="22"
     Protein         1..716
                     /product="leucine-rich repeat neuronal protein 1
                     precursor"
                     /note="leucine-rich repeat neuronal protein 1; neuronal
                     leucine-rich repeat protein 1; leucine-rich repeats and
                     calponin homology (CH) domain containing 4"
                     /calculated_mol_wt=78127
     sig_peptide     1..25
                     /note="/evidence=ECO:0000250; propagated from
                     UniProtKB/Swiss-Prot (A0N0X6.1)"
                     /calculated_mol_wt=2722
     mat_peptide     26..716
                     /product="Leucine-rich repeat neuronal protein 1.
                     /id=PRO_0000273549"
                     /note="propagated from UniProtKB/Swiss-Prot (A0N0X6.1)"
                     /calculated_mol_wt=78127
     Region          32..75
                     /region_name="LRRNT"
                     /note="Leucine rich repeat N-terminal domain; smart00013"
                     /db_xref="CDD:214470"
     Region          54..73
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Site            69
                     /site_type="glycosylation"
                     /note="N-linked (GlcNAc...) asparagine.
                     /evidence=ECO:0000255; propagated from
                     UniProtKB/Swiss-Prot (A0N0X6.1)"
     Region          73..95
                     /region_name="LRR 1"
                     /note="propagated from UniProtKB/Swiss-Prot (A0N0X6.1)"
     Region          74..96
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <89..>322
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          96..117
                     /region_name="LRR 2"
                     /note="propagated from UniProtKB/Swiss-Prot (A0N0X6.1)"
     Site            96
                     /site_type="glycosylation"
                     /note="N-linked (GlcNAc...) asparagine.
                     /evidence=ECO:0000255; propagated from
                     UniProtKB/Swiss-Prot (A0N0X6.1)"
     Region          97..120
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Site            106
                     /site_type="glycosylation"
                     /note="N-linked (GlcNAc...) asparagine.
                     /evidence=ECO:0000255; propagated from
                     UniProtKB/Swiss-Prot (A0N0X6.1)"
     Site            117
                     /site_type="glycosylation"
                     /note="N-linked (GlcNAc...) asparagine.
                     /evidence=ECO:0000255; propagated from
                     UniProtKB/Swiss-Prot (A0N0X6.1)"
     Region          120..141
                     /region_name="LRR 3"
                     /note="propagated from UniProtKB/Swiss-Prot (A0N0X6.1)"
     Region          121..144
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          144..165
                     /region_name="LRR 4"
                     /note="propagated from UniProtKB/Swiss-Prot (A0N0X6.1)"
     Region          145..168
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          168..189
                     /region_name="LRR 5"
                     /note="propagated from UniProtKB/Swiss-Prot (A0N0X6.1)"
     Region          169..192
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          192..213
                     /region_name="LRR 6"
                     /note="propagated from UniProtKB/Swiss-Prot (A0N0X6.1)"
     Region          193..216
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          216..237
                     /region_name="LRR 7"
                     /note="propagated from UniProtKB/Swiss-Prot (A0N0X6.1)"
     Region          217..240
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          240..261
                     /region_name="LRR 8"
                     /note="propagated from UniProtKB/Swiss-Prot (A0N0X6.1)"
     Region          241..264
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          264..285
                     /region_name="LRR 9"
                     /note="propagated from UniProtKB/Swiss-Prot (A0N0X6.1)"
     Region          265..288
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          289..313
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          312..373
                     /region_name="LRR_8"
                     /note="Leucine rich repeat; pfam13855"
                     /db_xref="CDD:404697"
     Region          314..335
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          339..362
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          363..375
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          371..419
                     /region_name="LRRCT"
                     /note="Leucine rich repeat C-terminal domain; smart00082"
                     /db_xref="CDD:214507"
     Site            385
                     /site_type="glycosylation"
                     /note="N-linked (GlcNAc...) asparagine.
                     /evidence=ECO:0000255; propagated from
                     UniProtKB/Swiss-Prot (A0N0X6.1)"
     Region          429..516
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          443..447
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409357"
     Region          456..460
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409357"
     Region          482..486
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409357"
     Region          496..501
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409357"
     Site            517
                     /site_type="glycosylation"
                     /note="N-linked (GlcNAc...) asparagine.
                     /evidence=ECO:0000255; propagated from
                     UniProtKB/Swiss-Prot (A0N0X6.1)"
     Region          531..600
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; smart00060"
                     /db_xref="CDD:214495"
     Site            582
                     /site_type="glycosylation"
                     /note="N-linked (GlcNAc...) asparagine.
                     /evidence=ECO:0000255; propagated from
                     UniProtKB/Swiss-Prot (A0N0X6.1)"
     Site            order(604..605,607..608)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Site            611
                     /site_type="glycosylation"
                     /note="N-linked (GlcNAc...) asparagine.
                     /evidence=ECO:0000255; propagated from
                     UniProtKB/Swiss-Prot (A0N0X6.1)"
     Site            632..652
                     /site_type="transmembrane region"
                     /note="propagated from UniProtKB/Swiss-Prot (A0N0X6.1)"
     Region          691..716
                     /region_name="Disordered.
                     /evidence=ECO:0000256|SAM:MobiDB-lite"
                     /note="propagated from UniProtKB/Swiss-Prot (A0N0X6.1)"
     CDS             1..716
                     /gene="LRRN1"
                     /gene_synonym="NLRR-1"
                     /coded_by="NM_001080738.1:264..2414"
                     /db_xref="BGD:BT18527"
                     /db_xref="GeneID:539619"
                     /db_xref="VGNC:VGNC:31039"
ORIGIN      
        1 marmsfvlaa yqmvlsllmt sltgsslqss ecpqlcvcei rpwftpqsty reattvdcnd
       61 lrltripsnl ssdtqvlllq snniaktvde lqqlfnltel dfsqnnftni kevglanltq
      121 lttlhleenq itemndyclq dlsnlqelyi nhnqistisa nafsglknll rlhlnsnklk
      181 vidsrwfdst pnleilmige npvigildmn fkplsnlrsl vlagmyltdi pgnalvglds
      241 leslsfydnk lvkvpqlalq kvpnlkfldl nknpihkiqe gdfknmlrlk elginnmgel
      301 vsvdryaldn lpeltkleat nnpklsyihr lafrsvpale slmlnnnaln avyqktvesl
      361 pnlreisihs nplrcdcvih winsnktnir fmeplsmfca mppeyrgqqv kevliqdsse
      421 qclpmishdt fpnhlnmdig ttvfldcram aepepeiywv tplgnkitve tlsekyklss
      481 egtleiskiq iedsgrytcv aqnvegadtr vvmikvngtl ldgaqvlkiy vkqteshsil
      541 vswkvnsnvm tsnlkwssat mkidnphity tarvpvdvhe ynlthlqpst dyevcltvsn
      601 ihqqtqkscv nvttknaafa ldisdqetst alaavmgsmf avislasiav yiakrfkrkn
      661 yhhslkkymq ktssiplnel ypplinlweg dsekdkdgta dtkptqvdts rsyymw
//
LOCUS       NP_001009300             191 aa            linear   MAM 10-NOV-2023
DEFINITION  prostaglandin-H2 D-isomerase precursor [Felis catus].
ACCESSION   NP_001009300
VERSION     NP_001009300.1
DBSOURCE    REFSEQ: accession NM_001009300.1
KEYWORDS    RefSeq.
SOURCE      Felis catus (domestic cat)
  ORGANISM  Felis catus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae;
            Felinae; Felis.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from D82048.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: D82048.1 [ECO:0000332]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Felis catus"
                     /db_xref="taxon:9685"
                     /chromosome="D4"
                     /map="D4"
     Protein         1..191
                     /product="prostaglandin-H2 D-isomerase precursor"
                     /EC_number="5.3.99.2"
                     /note="prostaglandin-H2 D-isomerase; PGDS; PGDS2; PGD2
                     synthase; glutathione-independent PGD synthetase;
                     lipocalin-type prostaglandin-D synthase;
                     glutathione-independent PGD synthase"
                     /calculated_mol_wt=19006
     sig_peptide     1..24
                     /note="/evidence=ECO:0000250|UniProtKB:P41222; propagated
                     from UniProtKB/Swiss-Prot (Q29487.1)"
                     /calculated_mol_wt=2564
     mat_peptide     25..191
                     /product="Prostaglandin-H2 D-isomerase.
                     /id=PRO_0000017942"
                     /note="propagated from UniProtKB/Swiss-Prot (Q29487.1)"
                     /calculated_mol_wt=19006
     Site            25
                     /site_type="pyrrolidone-carboxylic-acid"
                     /note="Pyrrolidone carboxylic acid.
                     /evidence=ECO:0000250|UniProtKB:P22057; propagated from
                     UniProtKB/Swiss-Prot (Q29487.1)"
     Region          31..187
                     /region_name="lipocalin_FABP"
                     /note="lipocalin/cytosolic fatty acid-binding protein
                     family; cl10502"
                     /db_xref="CDD:471979"
     Site            order(39,43,67,69,77,79,81,92,94,96,105,107,116,118,120,
                     129,131,133,145,147,149)
                     /site_type="other"
                     /note="ligand binding cavity [chemical binding]"
                     /db_xref="CDD:381182"
     Site            51
                     /site_type="glycosylation"
                     /note="N-linked (GlcNAc...) asparagine.
                     /evidence=ECO:0000250; propagated from
                     UniProtKB/Swiss-Prot (Q29487.1)"
     Site            78
                     /site_type="glycosylation"
                     /note="N-linked (GlcNAc...) asparagine.
                     /evidence=ECO:0000250; propagated from
                     UniProtKB/Swiss-Prot (Q29487.1)"
     CDS             1..191
                     /gene="PTGDS"
                     /coded_by="NM_001009300.1:64..639"
                     /db_xref="GeneID:493852"
ORIGIN      
        1 maalhtlwmg lvllgvlgvl qtraqaqvsr qpnfqqdkfl grwftsglas nsswfrekkn
       61 alsmcisvva psaegglnlt ttflrkdqce trtlllrpae tpgcysytsp hwgsthdvwv
      121 vatdyeeyal lytagtkspg qdfhmatlys rtqtpraevk ekfstfaktr gftedaivfl
      181 pktercmeeh r
//
LOCUS       NP_001036228             372 aa            linear   PRI 10-NOV-2023
DEFINITION  L-selectin precursor [Macaca mulatta].
ACCESSION   NP_001036228 XP_001094849
VERSION     NP_001036228.1
DBSOURCE    REFSEQ: accession NM_001042763.1
KEYWORDS    RefSeq.
SOURCE      Macaca mulatta (Rhesus monkey)
  ORGANISM  Macaca mulatta
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Cercopithecidae; Cercopithecinae; Macaca.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from U73730.1.
            
            On Aug 17, 2006 this sequence version replaced XP_001094849.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: U73730.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01830805 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Macaca mulatta"
                     /db_xref="taxon:9544"
                     /chromosome="1"
                     /map="1"
     Protein         1..372
                     /product="L-selectin precursor"
                     /note="L-selectin; LAM-1; LECAM1; lymph node homing
                     receptor; leukocyte adhesion molecule 1; CD62 antigen-like
                     family member L; leukocyte-endothelial cell adhesion
                     molecule 1"
                     /calculated_mol_wt=38621
     sig_peptide     1..28
                     /note="/evidence=ECO:0000250; propagated from
                     UniProtKB/Swiss-Prot (Q95198.1)"
                     /calculated_mol_wt=3506
     mat_peptide     39..372
                     /product="L-selectin. /id=PRO_0000017478"
                     /note="propagated from UniProtKB/Swiss-Prot (Q95198.1)"
                     /calculated_mol_wt=37524
     Region          39..157
                     /region_name="CLECT_selectins_like"
                     /note="C-type lectin-like domain (CTLD) of the type found
                     in the type 1 transmembrane proteins: P(platlet)-,
                     E(endothelial)-, and L(leukocyte)- selectins (sels);
                     cd03592"
                     /db_xref="CDD:153062"
     Site            60
                     /site_type="glycosylation"
                     /note="N-linked (GlcNAc...) asparagine.
                     /evidence=ECO:0000255; propagated from
                     UniProtKB/Swiss-Prot (Q95198.1)"
     Site            order(86,118,120..121,130,132,143..145)
                     /site_type="other"
                     /note="carbohydrate binding site [chemical binding]"
                     /db_xref="CDD:153062"
     Site            order(86,118,120,126,130,132,143..145)
                     /site_type="other"
                     /note="PSGL-1 peptide binding surface"
                     /db_xref="CDD:153062"
     Site            104
                     /site_type="glycosylation"
                     /note="N-linked (GlcNAc...) asparagine.
                     /evidence=ECO:0000255; propagated from
                     UniProtKB/Swiss-Prot (Q95198.1)"
     Region          <165..192
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            177
                     /site_type="glycosylation"
                     /note="N-linked (GlcNAc...) asparagine.
                     /evidence=ECO:0000255; propagated from
                     UniProtKB/Swiss-Prot (Q95198.1)"
     Region          197..255
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(207,228)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Site            226
                     /site_type="glycosylation"
                     /note="N-linked (GlcNAc...) asparagine.
                     /evidence=ECO:0000255; propagated from
                     UniProtKB/Swiss-Prot (Q95198.1)"
     Site            232
                     /site_type="glycosylation"
                     /note="N-linked (GlcNAc...) asparagine.
                     /evidence=ECO:0000255; propagated from
                     UniProtKB/Swiss-Prot (Q95198.1)"
     Site            246
                     /site_type="glycosylation"
                     /note="N-linked (GlcNAc...) asparagine.
                     /evidence=ECO:0000255; propagated from
                     UniProtKB/Swiss-Prot (Q95198.1)"
     Region          259..317
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(269,290)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Site            271
                     /site_type="glycosylation"
                     /note="N-linked (GlcNAc...) asparagine.
                     /evidence=ECO:0000255; propagated from
                     UniProtKB/Swiss-Prot (Q95198.1)"
     Site            333..355
                     /site_type="transmembrane region"
                     /note="propagated from UniProtKB/Swiss-Prot (Q95198.1)"
     CDS             1..372
                     /gene="SELL"
                     /coded_by="NM_001042763.1:1..1119"
                     /db_xref="GeneID:701419"
                     /db_xref="VGNC:VGNC:100138"
ORIGIN      
        1 mifprkcqst qrdlwnifkl wgwtmlccdf lahhgtdcwt yhysenpmnw qkarrfcren
       61 ytdlvaiqnk aeieylektl pfspsyywig irkiggiwtw vgtnksltqe aenwgdgepn
      121 nkknkedcve iyikrkkdag kwnddachkp kaalcytasc qpwscsghge cveiinnytc
      181 ncdvgyygpq cqfviqcepl eppklgtmdc thplgdfsfs sqcafncseg tnltgieett
      241 cgpfgnwssp eptcqviqce plsapdlgim ncshplasfs fssactfscs egteligekk
      301 ticessgiws npnpicqkld rsfsmikegd ynplfipvav mvtafsglaf iiwlarrlkk
      361 gkkskksmdd py
//
LOCUS       NP_001039407             634 aa            linear   MAM 10-NOV-2023
DEFINITION  uncharacterized protein KIAA2013 homolog precursor [Bos taurus].
ACCESSION   NP_001039407 XP_005217005 XP_582902 XP_871133
VERSION     NP_001039407.1
DBSOURCE    REFSEQ: accession NM_001045942.2
KEYWORDS    RefSeq.
SOURCE      Bos taurus (domestic cattle)
  ORGANISM  Bos taurus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Bovidae; Bovinae; Bos.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC112864.1.
            
            On or before Aug 31, 2013 this sequence version replaced
            XP_005217005.1, XP_871133.1, XP_582902.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC112864.1 [ECO:0000332]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Bos taurus"
                     /db_xref="taxon:9913"
                     /chromosome="16"
                     /map="16"
                     /breed="Hereford"
     Protein         1..634
                     /product="uncharacterized protein KIAA2013 homolog
                     precursor"
                     /calculated_mol_wt=65166
     sig_peptide     1..40
                     /note="/evidence=ECO:0000255; propagated from
                     UniProtKB/Swiss-Prot (Q2KHV9.1)"
                     /calculated_mol_wt=4438
     Region          6..629
                     /region_name="DUF2152"
                     /note="Uncharacterized conserved protein (DUF2152);
                     pfam10222"
                     /db_xref="CDD:431148"
     mat_peptide     41..634
                     /product="Uncharacterized protein KIAA2013 homolog.
                     /id=PRO_0000293467"
                     /note="propagated from UniProtKB/Swiss-Prot (Q2KHV9.1)"
                     /calculated_mol_wt=65166
     Site            363
                     /site_type="glycosylation"
                     /note="N-linked (GlcNAc...) asparagine.
                     /evidence=ECO:0000255; propagated from
                     UniProtKB/Swiss-Prot (Q2KHV9.1)"
     Site            590..610
                     /site_type="transmembrane region"
                     /note="propagated from UniProtKB/Swiss-Prot (Q2KHV9.1)"
     CDS             1..634
                     /gene="KIAA2013"
                     /coded_by="NM_001045942.2:88..1992"
                     /db_xref="BGD:BT22940"
                     /db_xref="GeneID:506454"
ORIGIN      
        1 mwlqqrlkgl pgllssswar rllcllgllv lllwfagsga rraagglqll pwphgepgaa
       61 epsacleaat hawrslrerg eavllgpgvp slvangflal dvvanrlwvt pgerepavap
      121 dfvpfvqlrp lsalpeages vlllregllr rvrclqlgts gpgpaaagpg pasasglltg
      181 sgrdcvllqe dflahrgrph vylqriqlnn ptervaalqt vgptagpapr aftstlekvg
      241 dhqfllysgr sppvptglvh lvvvaakklv drlqvaprtq ldetvlwvvh vsgplnpqvl
      301 kskaakelkv lqdlarkeml ellempaael lqdhqrlwaq lfspgvemkk itdahtpsgl
      361 tvnltlyyml scspapllsp dlshrerdqm estlnyedhc fsghatmhae nlwpgrlssv
      421 qqilqlwdlw rltlqkrgck glvragapgi lqgmvlsfgg lqftenhlqf qadpdvlhns
      481 yalhgirykn dhinlavlad aegkpylhvs vesrgqlvki yaceagclde pveltsapqg
      541 htfsvmvtqp itpllyistd lthlqdlrht lhlkailahd ehmaqqdpgl pflfwfsvas
      601 litlfhlflf kliyneycgp gakpffrnke dpsv
//
LOCUS       NP_001009232             341 aa            linear   MAM 10-NOV-2023
DEFINITION  KH domain-containing RNA-binding protein QKI [Felis catus].
ACCESSION   NP_001009232
VERSION     NP_001009232.1
DBSOURCE    REFSEQ: accession NM_001009232.1
KEYWORDS    RefSeq.
SOURCE      Felis catus (domestic cat)
  ORGANISM  Felis catus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae;
            Felinae; Felis.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AB061272.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AB061272.1 [ECO:0000332]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Felis catus"
                     /db_xref="taxon:9685"
                     /chromosome="B2"
                     /map="B2"
     Protein         1..341
                     /product="KH domain-containing RNA-binding protein QKI"
                     /note="protein quaking; quaking protein; fqkI; quaking
                     homolog, KH domain RNA binding"
                     /calculated_mol_wt=37540
     Region          10..64
                     /region_name="STAR_dimer"
                     /note="Homodimerization region of STAR domain protein;
                     pfam16544"
                     /db_xref="CDD:435414"
     Region          11..82
                     /region_name="Qua1 domain, involved in homodimerization.
                     /evidence=ECO:0000250|UniProtKB:Q17339"
                     /note="propagated from UniProtKB/Swiss-Prot (Q7JJZ8.1)"
     Region          81..183
                     /region_name="KH-I_Hqk"
                     /note="type I K homology (KH) RNA-binding domain found in
                     protein quaking (Hqk) and similar proteins; cd22465"
                     /db_xref="CDD:411893"
     Site            order(97,99..101,103..107,111,120..124,128,130,144)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:411893"
     Site            97
                     /site_type="other"
                     /note="Involved in RNA binding.
                     /evidence=ECO:0000250|UniProtKB:Q96PU8; propagated from
                     UniProtKB/Swiss-Prot (Q7JJZ8.1)"
     Site            120
                     /site_type="other"
                     /note="Involved in RNA binding.
                     /evidence=ECO:0000250|UniProtKB:Q96PU8; propagated from
                     UniProtKB/Swiss-Prot (Q7JJZ8.1)"
     Site            124
                     /site_type="other"
                     /note="Involved in RNA binding.
                     /evidence=ECO:0000250|UniProtKB:Q96PU8; propagated from
                     UniProtKB/Swiss-Prot (Q7JJZ8.1)"
     Site            130
                     /site_type="other"
                     /note="Involved in RNA binding.
                     /evidence=ECO:0000250|UniProtKB:Q96PU8; propagated from
                     UniProtKB/Swiss-Prot (Q7JJZ8.1)"
     Region          182..213
                     /region_name="Qua2 domain, involved in RNA binding.
                     /evidence=ECO:0000250|UniProtKB:Q96PU8"
                     /note="propagated from UniProtKB/Swiss-Prot (Q7JJZ8.1)"
     Site            188
                     /site_type="phosphorylation"
                     /note="Phosphoserine.
                     /evidence=ECO:0000250|UniProtKB:Q96PU8; propagated from
                     UniProtKB/Swiss-Prot (Q7JJZ8.1)"
     Site            190
                     /site_type="other"
                     /note="Involved in RNA binding.
                     /evidence=ECO:0000250|UniProtKB:Q96PU8; propagated from
                     UniProtKB/Swiss-Prot (Q7JJZ8.1)"
     Site            193
                     /site_type="other"
                     /note="Involved in RNA binding.
                     /evidence=ECO:0000250|UniProtKB:Q96PU8; propagated from
                     UniProtKB/Swiss-Prot (Q7JJZ8.1)"
     Region          <211..314
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Site            227
                     /site_type="methylation"
                     /note="Omega-N-methylarginine.
                     /evidence=ECO:0000250|UniProtKB:Q96PU8; propagated from
                     UniProtKB/Swiss-Prot (Q7JJZ8.1)"
     Site            242
                     /site_type="methylation"
                     /note="Asymmetric dimethylarginine, by CARM1, alternate.
                     /evidence=ECO:0000250|UniProtKB:Q96PU8;
                     Omega-N-methylarginine, alternate.
                     /evidence=ECO:0000250|UniProtKB:Q96PU8; propagated from
                     UniProtKB/Swiss-Prot (Q7JJZ8.1)"
     Site            256
                     /site_type="methylation"
                     /note="Omega-N-methylarginine.
                     /evidence=ECO:0000250|UniProtKB:Q9QYS9; propagated from
                     UniProtKB/Swiss-Prot (Q7JJZ8.1)"
     Region          276..279
                     /region_name="SH3-binding"
                     /note="propagated from UniProtKB/Swiss-Prot (Q7JJZ8.1)"
     Region          312..341
                     /region_name="Quaking_NLS"
                     /note="Putative nuclear localization signal of quaking;
                     pfam16551"
                     /db_xref="CDD:435421"
     Region          324..330
                     /region_name="Nuclear localization signal.
                     /evidence=ECO:0000250|UniProtKB:Q9QYS9"
                     /note="propagated from UniProtKB/Swiss-Prot (Q7JJZ8.1)"
     CDS             1..341
                     /gene="QKI"
                     /coded_by="NM_001009232.1:19..1044"
                     /db_xref="GeneID:493723"
                     /db_xref="VGNC:VGNC:64456"
ORIGIN      
        1 mvgemetkek pkptpdylmq lmndkklmss lpnfcgifnh lerlldeeis rvrkdmyndt
       61 lngstekrsa elpdavgpiv qlqeklyvpv keypdfnfvg rilgprglta kqleaetgck
      121 imvrgkgsmr dkkkeeqnrg kpnwehlned lhvlitveda qnraeiklkr aveevkkllv
      181 paaegedslk kmqlmelail ngtyrdanik spalafslaa taqaapriit gpapvlppaa
      241 lrtptpagpt implirqiqt avmpngtphp taaivppgpe agliytpyey pytlapatsi
      301 leypiepsgv lgavatkvrr hdmrvhpyqr ivtadraatg n
//
LOCUS       NP_001106110             165 aa            linear   PRI 11-NOV-2023
DEFINITION  interferon gamma precursor [Papio anubis].
ACCESSION   NP_001106110
VERSION     NP_001106110.1
DBSOURCE    REFSEQ: accession NM_001112640.1
KEYWORDS    RefSeq.
SOURCE      Papio anubis (olive baboon)
  ORGANISM  Papio anubis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Cercopithecidae; Cercopithecinae; Papio.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AF548378.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF548378.1, AY234217.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN02045698, SAMN02401340
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Papio anubis"
                     /db_xref="taxon:9555"
                     /chromosome="9"
                     /map="9"
     Protein         1..165
                     /product="interferon gamma precursor"
                     /note="IFN-gamma"
                     /calculated_mol_wt=16858
     sig_peptide     1..23
                     /note="/evidence=ECO:0000250; propagated from
                     UniProtKB/Swiss-Prot (Q865Y4.1)"
                     /calculated_mol_wt=2590
     Region          15..152
                     /region_name="IFN-gamma"
                     /note="Interferon gamma; pfam00714"
                     /db_xref="CDD:395581"
     mat_peptide     24..165
                     /product="Interferon gamma. /id=PRO_0000016454"
                     /note="propagated from UniProtKB/Swiss-Prot (Q865Y4.1)"
                     /calculated_mol_wt=16858
     Site            24
                     /site_type="pyrrolidone-carboxylic-acid"
                     /note="Pyrrolidone carboxylic acid.
                     /evidence=ECO:0000250|UniProtKB:P01579; propagated from
                     UniProtKB/Swiss-Prot (Q865Y4.1)"
     Site            48
                     /site_type="glycosylation"
                     /note="N-linked (GlcNAc...) asparagine.
                     /evidence=ECO:0000255; propagated from
                     UniProtKB/Swiss-Prot (Q865Y4.1)"
     Site            120
                     /site_type="glycosylation"
                     /note="N-linked (GlcNAc...) asparagine.
                     /evidence=ECO:0000255; propagated from
                     UniProtKB/Swiss-Prot (Q865Y4.1)"
     CDS             1..165
                     /gene="IFNG"
                     /coded_by="NM_001112640.1:1..498"
                     /db_xref="GeneID:100126724"
ORIGIN      
        1 mkytsyilaf qlcivlgslg cycqdpyvke aenlkkyfna vdpdvadngt lfldilrnwk
       61 eesdrkimqs qivsfyfklf knfkddqriq ksvetikedi nvkffnsnkk kwddfekltn
      121 ysvtdlnvqr kavheliqvm aelspaakig krkrsqmfrg rrasq
//
LOCUS       NP_001162430             267 aa            linear   PRI 11-NOV-2023
DEFINITION  large ribosomal subunit protein bL9m [Papio anubis].
ACCESSION   NP_001162430
VERSION     NP_001162430.1
DBSOURCE    REFSEQ: accession NM_001168959.1
KEYWORDS    RefSeq.
SOURCE      Papio anubis (olive baboon)
  ORGANISM  Papio anubis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Cercopithecidae; Cercopithecinae; Papio.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from DP000542.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN05440900
                              [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Papio anubis"
                     /db_xref="taxon:9555"
                     /chromosome="1"
                     /map="1"
     Protein         1..267
                     /product="large ribosomal subunit protein bL9m"
                     /note="39S ribosomal protein L9, mitochondrial; L9mt;
                     MRP-L9; mitochondrial ribosomal protein L9, nuclear gene
                     encoding mitochondrial protein"
                     /calculated_mol_wt=24913
     transit_peptide 1..52
                     /note="Mitochondrion.
                     /evidence=ECO:0000250|UniProtKB:Q2TBK2; propagated from
                     UniProtKB/Swiss-Prot (A9X1A9.1)"
                     /calculated_mol_wt=5638
     mat_peptide     53..267
                     /product="Large ribosomal subunit protein bL9m.
                     /id=PRO_0000319309"
                     /note="propagated from UniProtKB/Swiss-Prot (A9X1A9.1)"
                     /calculated_mol_wt=24913
     Region          94..225
                     /region_name="L9"
                     /note="ribosomal protein L9; TIGR00158"
                     /db_xref="CDD:129262"
     Region          95..140
                     /region_name="Ribosomal_L9_N"
                     /note="Ribosomal protein L9, N-terminal domain; pfam01281"
                     /db_xref="CDD:460146"
     CDS             1..267
                     /gene="MRPL9"
                     /coded_by="NM_001168959.1:1..804"
                     /db_xref="GeneID:100137425"
ORIGIN      
        1 maalvvtepg rallragter llrggiqell rprhegnspg lardfslsqn rgtviverww
       61 kvplagegrk prlhrrhrvy klvedtkhrp kenleliltq svenigvrgd lvsvrkslgr
      121 nallpqglav yaspenkklf eeekslrqeg kleklqtkag evtvkflksc rlevgmknnv
      181 kwelnpeiva rhffknlgvv vaphtlklpe epitrwgeyw cevtvngldt irvpmsvvnf
      241 ekpktkryky wlaqqtakrm aptspqi
//
LOCUS       NP_001233629             253 aa            linear   ROD 11-NOV-2023
DEFINITION  testis-expressed protein 101 precursor [Cricetulus griseus].
ACCESSION   NP_001233629
VERSION     NP_001233629.1
DBSOURCE    REFSEQ: accession NM_001246700.1
KEYWORDS    RefSeq.
SOURCE      Cricetulus griseus (Chinese hamster)
  ORGANISM  Cricetulus griseus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Cricetidae; Cricetinae; Cricetulus.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AY309070.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY309070.1 [ECO:0000332]
            RNAseq introns              :: mixed/partial sample support
                                           SAMN04275181, SAMN04501030
                                           [ECO:0000350]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Cricetulus griseus"
                     /db_xref="taxon:10029"
                     /chromosome="9"
                     /map="9"
     Protein         1..253
                     /product="testis-expressed protein 101 precursor"
                     /note="Testis-expressed protein 101; lipid raft-associated
                     glycoprotein TEC-21; testis-expressed sequence 101
                     protein"
                     /calculated_mol_wt=24328
     sig_peptide     1..24
                     /note="/evidence=ECO:0000250; propagated from
                     UniProtKB/Swiss-Prot (Q7TQN2.1)"
                     /calculated_mol_wt=2668
     mat_peptide     25..226
                     /product="Testis-expressed protein 101.
                     /id=PRO_0000247619"
                     /note="propagated from UniProtKB/Swiss-Prot (Q7TQN2.1)"
                     /calculated_mol_wt=21399
     Region          25..126
                     /region_name="TFP_LU_ECD_TEX101_rpt1"
                     /note="first extracellular domain (ECD) found in
                     testis-expressed protein 101 (TEX101) and similar
                     proteins; cd23622"
                     /db_xref="CDD:467142"
     Site            44
                     /site_type="glycosylation"
                     /note="N-linked (GlcNAc...) asparagine.
                     /evidence=ECO:0000255; propagated from
                     UniProtKB/Swiss-Prot (Q7TQN2.1)"
     Site            112
                     /site_type="glycosylation"
                     /note="N-linked (GlcNAc...) asparagine.
                     /evidence=ECO:0000255; propagated from
                     UniProtKB/Swiss-Prot (Q7TQN2.1)"
     Site            117
                     /site_type="glycosylation"
                     /note="N-linked (GlcNAc...) asparagine.
                     /evidence=ECO:0000255; propagated from
                     UniProtKB/Swiss-Prot (Q7TQN2.1)"
     Site            121
                     /site_type="glycosylation"
                     /note="N-linked (GlcNAc...) asparagine.
                     /evidence=ECO:0000255; propagated from
                     UniProtKB/Swiss-Prot (Q7TQN2.1)"
     Region          139..221
                     /region_name="TFP_LU_ECD_TEX101_rpt2"
                     /note="second extracellular domain (ECD) found in
                     testis-expressed protein 101 (TEX101) and similar
                     proteins; cd23634"
                     /db_xref="CDD:467798"
     Site            162
                     /site_type="glycosylation"
                     /note="N-linked (GlcNAc...) asparagine.
                     /evidence=ECO:0000255; propagated from
                     UniProtKB/Swiss-Prot (Q7TQN2.1)"
     Site            162
                     /site_type="other"
                     /note="N159 glycosylation site [posttranslational
                     modification]"
                     /db_xref="CDD:467798"
     CDS             1..253
                     /gene="Tex101"
                     /gene_synonym="testis"
                     /coded_by="NM_001246700.1:1..762"
                     /db_xref="GeneID:100689441"
ORIGIN      
        1 maacwvhyll llllgvshqt laqslqcavs kvlrleddps rtfnwtskpd kvetcnpgel
       61 cqetvllika egtktavvas kgcasreiea vtfiqytppp gviaisysny cnsslcnnsk
      121 nvslfwkppd ttatskilga lscptcvalg scssapsmpc ansttqcyqg kielsgggmd
      181 svlhikgctt aigcrlmaai tsvgpmtvke tcsyhsllqp rkaeesrasg rstslwvlel
      241 llpavlvalt hfp
//
LOCUS       NP_001073588             375 aa            linear   PRI 12-NOV-2023
DEFINITION  growth/differentiation factor 8 precursor [Macaca mulatta].
ACCESSION   NP_001073588 XP_001107874
VERSION     NP_001073588.1
DBSOURCE    REFSEQ: accession NM_001080119.1
KEYWORDS    RefSeq.
SOURCE      Macaca mulatta (Rhesus monkey)
  ORGANISM  Macaca mulatta
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Cercopithecidae; Cercopithecinae; Macaca.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from DQ927195.1.
            
            On Jan 11, 2007 this sequence version replaced XP_001107874.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA4688326,
                              SAMEA4688327 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Macaca mulatta"
                     /db_xref="taxon:9544"
                     /chromosome="12"
                     /map="12"
     Protein         1..375
                     /product="growth/differentiation factor 8 precursor"
                     /note="growth/differentiation factor 8; GDF-8"
                     /calculated_mol_wt=40069
     sig_peptide     1..23
                     /note="/evidence=ECO:0000255; propagated from
                     UniProtKB/Swiss-Prot (A1C2U6.1)"
                     /calculated_mol_wt=2671
     Region          49..253
                     /region_name="TGFb_propeptide"
                     /note="TGF-beta propeptide; cl46657"
                     /db_xref="CDD:480997"
     Site            71
                     /site_type="glycosylation"
                     /note="N-linked (GlcNAc...) asparagine.
                     /evidence=ECO:0000255; propagated from
                     UniProtKB/Swiss-Prot (A1C2U6.1)"
     Site            98..99
                     /site_type="cleavage"
                     /note="Cleavage. /evidence=ECO:0000250|UniProtKB:O08689;
                     propagated from UniProtKB/Swiss-Prot (A1C2U6.1)"
     mat_peptide     267..375
                     /product="Growth/differentiation factor 8.
                     /id=PRO_0000285563"
                     /note="propagated from UniProtKB/Swiss-Prot (A1C2U6.1)"
                     /calculated_mol_wt=12407
     Region          268..375
                     /region_name="TGF_beta_GDF8"
                     /note="transforming growth factor beta (TGF-beta) like
                     domain found in growth/differentiation factor 8 (GDF8) and
                     similar proteins; cd19388"
                     /db_xref="CDD:381658"
     Site            order(268..270,278,280,286,293..297,299,302,304..308,310,
                     315..318,321..323,325..327,329..330,332..334,339,341,345,
                     349..361,364..367,369,375)
                     /site_type="other"
                     /note="polypeptide substrate binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:381658"
     Site            order(286,288,290,293,295,297,304,306..310,318..319,
                     321..323,325..327,330..331,333..337,339..342,345,350,352,
                     364..367,369,375)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381658"
     Site            order(291,296..297,299..302,349,351,353,357..361)
                     /site_type="other"
                     /note="polypeptide substrate binding site 1 [polypeptide
                     binding]"
                     /db_xref="CDD:381658"
     CDS             1..375
                     /gene="MSTN"
                     /gene_synonym="GDF8"
                     /coded_by="NM_001080119.1:1..1128"
                     /db_xref="GeneID:710114"
                     /db_xref="VGNC:VGNC:74870"
ORIGIN      
        1 mqklqlcvyi ylfmlivagp vdlnenseqk envekeglcn actwrqntks srieaikiqi
       61 lsklrletap niskdairql lpkapplrel idqydvqrdd ssdgsleddd yhattetiit
      121 mptesdflmq vdgkpkccff kfsskiqynk vvkaqlwiyl rpvetpttvf vqilrlikpm
      181 kdgtrytgir slkldmnpgt giwqsidvkt vlqnwlkqpe snlgieikal denghdlavt
      241 fpgpgedgln pflevkvtdt pkrsrrdfgl dcdehstesr ccrypltvdf eafgwdwiia
      301 pkrykanycs gecefvflqk yphthlvhqa nprgsagpcc tptkmspinm lyfngkeqii
      361 ygkipamvvd rcgcs
//
LOCUS       NP_001162415             184 aa            linear   PRI 12-NOV-2023
DEFINITION  tumor necrosis factor alpha-induced protein 8-like protein 2 [Papio
            anubis].
ACCESSION   NP_001162415
VERSION     NP_001162415.1
DBSOURCE    REFSEQ: accession NM_001168944.1
KEYWORDS    RefSeq.
SOURCE      Papio anubis (olive baboon)
  ORGANISM  Papio anubis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Cercopithecidae; Cercopithecinae; Papio.
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from DP000542.1.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Papio anubis"
                     /db_xref="taxon:9555"
                     /chromosome="1"
                     /map="1"
     Protein         1..184
                     /product="tumor necrosis factor alpha-induced protein
                     8-like protein 2"
                     /note="TNFAIP8-like protein 2; Tumor necrosis factor,
                     alpha-induced protein 8-like protein 2; TNF alpha-induced
                     protein 8-like protein 2"
                     /calculated_mol_wt=20411
     Site            3
                     /site_type="phosphorylation"
                     /note="Phosphoserine.
                     /evidence=ECO:0000250|UniProtKB:Q6P589; propagated from
                     UniProtKB/Swiss-Prot (A9X192.1)"
     Region          25..182
                     /region_name="DUF758"
                     /note="Domain of unknown function (DUF758); pfam05527"
                     /db_xref="CDD:461672"
     CDS             1..184
                     /gene="TNFAIP8L2"
                     /gene_synonym="TIPE2"
                     /coded_by="NM_001168944.1:1..555"
                     /db_xref="GeneID:100137410"
ORIGIN      
        1 mesfssksla lqaekkllsk magrsvahlf idetssevld elyrvskeyt hsrpqaqrvi
       61 kdlikvavkv avlhrngsfg pselalatrf rqklrqgamt alsfgevdft feaavlagll
      121 tecrdvllel vehhltpksh grirhvfdhf sdpglltaly gpdftqhlgk icdglrklld
      181 egkl
//
LOCUS       NP_001069983             316 aa            linear   MAM 12-NOV-2023
DEFINITION  ecto-ADP-ribosyltransferase 5 precursor [Bos taurus].
ACCESSION   NP_001069983 XP_876085
VERSION     NP_001069983.1
DBSOURCE    REFSEQ: accession NM_001076515.1
KEYWORDS    RefSeq.
SOURCE      Bos taurus (domestic cattle)
  ORGANISM  Bos taurus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Bovidae; Bovinae; Bos.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC120389.1.
            
            On Oct 4, 2006 this sequence version replaced XP_876085.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC120389.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN03145418, SAMN03145445
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Bos taurus"
                     /db_xref="taxon:9913"
                     /chromosome="15"
                     /map="15"
                     /breed="L1 Hereford"
     Protein         1..316
                     /product="ecto-ADP-ribosyltransferase 5 precursor"
                     /EC_number="2.4.2.31"
                     /note="ecto-ADP-ribosyltransferase 5;
                     mono(ADP-ribosyl)transferase 5; ADP-ribosyltransferase C2
                     and C3 toxin-like 5; NAD(P)(+)--arginine
                     ADP-ribosyltransferase 5"
                     /calculated_mol_wt=32438
     sig_peptide     1..23
                     /note="/evidence=ECO:0000255; propagated from
                     UniProtKB/Swiss-Prot (Q0VC22.1)"
                     /calculated_mol_wt=2474
     mat_peptide     24..316
                     /product="Ecto-ADP-ribosyltransferase 5.
                     /id=PRO_0000379471"
                     /note="propagated from UniProtKB/Swiss-Prot (Q0VC22.1)"
                     /calculated_mol_wt=32438
     Region          36..262
                     /region_name="ART"
                     /note="NAD:arginine ADP-ribosyltransferase; pfam01129"
                     /db_xref="CDD:279473"
     Site            68
                     /site_type="glycosylation"
                     /note="N-linked (GlcNAc...) asparagine.
                     /evidence=ECO:0000255; propagated from
                     UniProtKB/Swiss-Prot (Q0VC22.1)"
     Site            109
                     /site_type="glycosylation"
                     /note="N-linked (GlcNAc...) asparagine.
                     /evidence=ECO:0000255; propagated from
                     UniProtKB/Swiss-Prot (Q0VC22.1)"
     Site            242
                     /site_type="glycosylation"
                     /note="N-linked (GlcNAc...) asparagine.
                     /evidence=ECO:0000255; propagated from
                     UniProtKB/Swiss-Prot (Q0VC22.1)"
     Site            248
                     /site_type="glycosylation"
                     /note="N-linked (GlcNAc...) asparagine.
                     /evidence=ECO:0000255; propagated from
                     UniProtKB/Swiss-Prot (Q0VC22.1)"
     CDS             1..316
                     /gene="LOC618664"
                     /gene_synonym="ART5; ARTC5"
                     /coded_by="NM_001076515.1:371..1321"
                     /db_xref="BGD:BT13339"
                     /db_xref="GeneID:618664"
ORIGIN      
        1 miqatllisl sclsfytlgs gvrrydpgqg vtiqylslap dtfddayvgc seemeekavl
       61 llekemanht rlreswetaq kaweqkragl tlppgfrsqh giaimvytns sntlyrelnq
      121 avrtgggswe symkhfpfka lhfyltralq llrggggcsr eprqevfrgv rrihfvpksv
      181 gdsirlgqfa sssldeavac gfgsatffsl rtcsgapiqa lsvfpeerev lippyevfvv
      241 snfskdgnks lmtlsssdqm cshfncaylg ekkrpscefv piggqgdsls kgafsllswk
      301 tlllaswgfq llgagl
//
LOCUS       NP_001253667             315 aa            linear   PRI 13-NOV-2023
DEFINITION  solute carrier family 25 member 32 [Macaca mulatta].
ACCESSION   NP_001253667 XP_001085498 XP_002805502
VERSION     NP_001253667.1
DBSOURCE    REFSEQ: accession NM_001266738.1
KEYWORDS    RefSeq.
SOURCE      Macaca mulatta (Rhesus monkey)
  ORGANISM  Macaca mulatta
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Cercopithecidae; Cercopithecinae; Macaca.
REFERENCE   1  (residues 1 to 315)
  AUTHORS   Zimin AV, Cornish AS, Maudhoo MD, Gibbs RM, Zhang X, Pandey S,
            Meehan DT, Wipfler K, Bosinger SE, Johnson ZP, Tharp GK, Marcais G,
            Roberts M, Ferguson B, Fox HS, Treangen T, Salzberg SL, Yorke JA
            and Norgren RB Jr.
  TITLE     A new rhesus macaque assembly and annotation for next-generation
            sequencing analyses
  JOURNAL   Biol Direct 9 (1), 20 (2014)
   PUBMED   25319552
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 315)
  AUTHORS   Yan G, Zhang G, Fang X, Zhang Y, Li C, Ling F, Cooper DN, Li Q, Li
            Y, van Gool AJ, Du H, Chen J, Chen R, Zhang P, Huang Z, Thompson
            JR, Meng Y, Bai Y, Wang J, Zhuo M, Wang T, Huang Y, Wei L, Li J,
            Wang Z, Hu H, Yang P, Le L, Stenson PD, Li B, Liu X, Ball EV, An N,
            Huang Q, Zhang Y, Fan W, Zhang X, Li Y, Wang W, Katze MG, Su B,
            Nielsen R, Yang H, Wang J, Wang X and Wang J.
  TITLE     Genome sequencing and comparison of two nonhuman primate animal
            models, the cynomolgus and Chinese rhesus macaques
  JOURNAL   Nat Biotechnol 29 (11), 1019-1023 (2011)
   PUBMED   22002653
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from JV044660.1.
            
            On or before May 25, 2012 this sequence version replaced
            XP_001085498.1, XP_002805502.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: JV044660.1, JV528984.1 [ECO:0000332]
            RNAseq introns              :: mixed/partial sample support
                                           SAMEA4688315, SAMEA4688316
                                           [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Macaca mulatta"
                     /db_xref="taxon:9544"
                     /chromosome="8"
                     /map="8"
     Protein         1..315
                     /product="solute carrier family 25 member 32"
                     /note="mitochondrial folate transporter/carrier; solute
                     carrier family 25 (mitochondrial folate carrier), member
                     32"
                     /calculated_mol_wt=35285
     Region          26..307
                     /region_name="PTZ00169"
                     /note="ADP/ATP transporter on adenylate translocase;
                     Provisional"
                     /db_xref="CDD:240302"
     CDS             1..315
                     /gene="SLC25A32"
                     /coded_by="NM_001266738.1:321..1268"
                     /db_xref="GeneID:694759"
                     /db_xref="VGNC:VGNC:84116"
ORIGIN      
        1 mtgqghsasg ssawstvfrh vryenlvagv sggvlsnlal hpldlvkirf avsdglelrp
       61 kyngilhclt tiwkldglrg lyqgvtpnvw gaglswglyf ffynaiksyk tegraerlea
      121 teylvsaaea gamtlcitnp lwvtktrlml qydavinsph rqykgmfdtl vkiykyegvr
      181 glykgfvpgl fgtshgalqf mayellklky nqhinrlpea qlstveyisv aalskifava
      241 atypyqvvra rlqdqhmfys gvidvitktw rkegiggfyk giapnlirvt paccitfvvy
      301 envshflldl rekrk
//
LOCUS       NP_001254778             456 aa            linear   MAM 13-NOV-2023
DEFINITION  solute carrier family 38 member 6 [Sus scrofa].
ACCESSION   NP_001254778 XP_003121895
VERSION     NP_001254778.1
DBSOURCE    REFSEQ: accession NM_001267849.1
KEYWORDS    RefSeq.
SOURCE      Sus scrofa (pig)
  ORGANISM  Sus scrofa
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae;
            Sus.
REFERENCE   1  (residues 1 to 456)
  AUTHORS   Uenishi H, Eguchi-Ogawa T, Shinkai H, Okumura N, Suzuki K, Toki D,
            Hamasima N and Awata T.
  TITLE     PEDE (Pig EST Data Explorer) has been expanded into Pig Expression
            Data Explorer, including 10 147 porcine full-length cDNA sequences
  JOURNAL   Nucleic Acids Res 35 (Database issue), D650-D653 (2007)
   PUBMED   17145712
REFERENCE   2  (residues 1 to 456)
  AUTHORS   Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H,
            Okumura N, Hamasima N and Awata T.
  TITLE     PEDE (Pig EST Data Explorer): construction of a database for ESTs
            derived from porcine full-length cDNA libraries
  JOURNAL   Nucleic Acids Res 32 (Database issue), D484-D488 (2004)
   PUBMED   14681463
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK344657.1.
            
            On Jun 23, 2012 this sequence version replaced XP_003121895.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK344657.1, SRR5012866.207107.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA103886111, SAMEA103886112
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Sus scrofa"
                     /db_xref="taxon:9823"
                     /chromosome="1"
                     /map="1"
     Protein         1..456
                     /product="solute carrier family 38 member 6"
                     /note="putative sodium-coupled neutral amino acid
                     transporter 6"
                     /calculated_mol_wt=50566
     Region          46..451
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
     CDS             1..456
                     /gene="SLC38A6"
                     /coded_by="NM_001267849.1:53..1423"
                     /db_xref="GeneID:100519583"
                     /db_xref="VGNC:VGNC:93098"
ORIGIN      
        1 meapwgtisa epgwfvstqq ieeaeaeels pllsnelhrq gspgvsfgfs vfnlmnaimg
       61 sgilglayvm ahtgilgfsl lllmvallas ysvhlllsmc iqtavtsyed lglfafglpg
      121 kvvvagtiii qnigamssyl liiktelpaa iseflsgdhs gswyldgetl liiicvgivf
      181 plallpkigf lgytsslsff fmvffaivii ikkwsipcpl tlnyieryfq isnvtddckp
      241 klfhfskesa yaiptmafsf lchtsilpiy celqspskkr mqnvtntaia lsfliyfisa
      301 lfgyltfydn vasellqgys kylphdvvvm tvklcilfav lltvplihfp arkalmmiff
      361 snfpfswirh flitlalnii ivllaiyvpd irnvfgvigs ststclifvf pglfylrlsr
      421 edflswkklg afvllifgil vgnfslalvi fnwink
//
LOCUS       NP_001182282             875 aa            linear   MAM 13-NOV-2023
DEFINITION  GATOR2 complex protein MIOS [Sus scrofa].
ACCESSION   NP_001182282
VERSION     NP_001182282.1
DBSOURCE    REFSEQ: accession NM_001195353.1
KEYWORDS    RefSeq.
SOURCE      Sus scrofa (pig)
  ORGANISM  Sus scrofa
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae;
            Sus.
REFERENCE   1  (residues 1 to 875)
  AUTHORS   Uenishi H, Eguchi-Ogawa T, Shinkai H, Okumura N, Suzuki K, Toki D,
            Hamasima N and Awata T.
  TITLE     PEDE (Pig EST Data Explorer) has been expanded into Pig Expression
            Data Explorer, including 10 147 porcine full-length cDNA sequences
  JOURNAL   Nucleic Acids Res 35 (Database issue), D650-D653 (2007)
   PUBMED   17145712
REFERENCE   2  (residues 1 to 875)
  AUTHORS   Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H,
            Okumura N, Hamasima N and Awata T.
  TITLE     PEDE (Pig EST Data Explorer): construction of a database for ESTs
            derived from porcine full-length cDNA libraries
  JOURNAL   Nucleic Acids Res 32 (Database issue), D484-D488 (2004)
   PUBMED   14681463
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from GU373700.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: GU373700.1, AK351584.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA1876824, SAMEA3179990
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..875
                     /organism="Sus scrofa"
                     /db_xref="taxon:9823"
                     /chromosome="9"
                     /map="9"
     Protein         1..875
                     /product="GATOR2 complex protein MIOS"
                     /note="missing oocyte, meiosis regulator-like protein"
                     /calculated_mol_wt=98398
     Region          64..105
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <84..327
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          116..176
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          188..220
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          227..264
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          270..318
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          325..347
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          782..858
                     /region_name="mRING-H2-C3H3C2_Mio"
                     /note="Modified RING finger, H2 subclass (C3H3C2-type),
                     found in WD repeat-containing protein mio and simialr
                     proteins; cd16691"
                     /db_xref="CDD:438352"
     CDS             1..875
                     /gene="MIOS"
                     /coded_by="NM_001195353.1:285..2912"
                     /db_xref="GeneID:100337662"
                     /db_xref="VGNC:VGNC:90234"
ORIGIN      
        1 msgtkpdilw aphqvdrfvv cdselslyhv estvnselka gslrlsedsa atllsinset
       61 pymkcvawyl nydpecllav gqangrvvlt slgqdhnskf kdligkefvp kharqcntla
      121 wnpldsnwla agldkhradf svliwdicsk ytpdivplek vrlsagetet tllvtkplye
      181 lgqndaclsl cwlprdqkll lagmhrnlai fdlrntsqkm fvntkavqgv tvdpyfhdrv
      241 asfyegqvai wdlrkfekpv ltlteqpkpl tkvawcptrt gllatltrds niirlydmqh
      301 tptpigdete ptiiersvqp cenyiasfaw hptsqnrmiv vtpnrtmsdf tvferislaw
      361 spitslmwac grhlyecaee endnslekdi atkmrlrals rygldteqvw rnhilagned
      421 pqlkslwytl hfmkqytedm dqkspgnkgs lvyagiksiv ksslgmvess rhswsgldkq
      481 tdiqnlneer ilalqlcgwi kkgtdvdvgp flnslvqege weraaavalf nldirraiqi
      541 lnegassekg dlnlnvvama lsgytdekns lwremcstlr lqlnnpylcv mfafltsdag
      601 sydgvlyenk vavrdrvafa ckflsdsqln ryiekltnem keagnlegil ltgltkdgvd
      661 lmesyvdrtg dvqtasycml qgspldvlkd ervqywieny rnlldawrfw hkraefdihr
      721 skldpsskpl aqvfvscnfc gksisyscst vphqgrgfsq ygvsgsptks kvtscpgcrk
      781 plprcalcli nmgtpvsscp ggsksdekvd lskdkklaqf nnwftwchnc rhgghaghml
      841 swfrdhaecp vsactckcmq ldttgnlvpa etvqp
//
LOCUS       NP_001230390             771 aa            linear   MAM 13-NOV-2023
DEFINITION  solute carrier family 7 member 14 [Sus scrofa].
ACCESSION   NP_001230390 XP_003132578
VERSION     NP_001230390.1
DBSOURCE    REFSEQ: accession NM_001243461.1
KEYWORDS    RefSeq.
SOURCE      Sus scrofa (pig)
  ORGANISM  Sus scrofa
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae;
            Sus.
REFERENCE   1  (residues 1 to 771)
  AUTHORS   Uenishi H, Eguchi-Ogawa T, Shinkai H, Okumura N, Suzuki K, Toki D,
            Hamasima N and Awata T.
  TITLE     PEDE (Pig EST Data Explorer) has been expanded into Pig Expression
            Data Explorer, including 10 147 porcine full-length cDNA sequences
  JOURNAL   Nucleic Acids Res 35 (Database issue), D650-D653 (2007)
   PUBMED   17145712
REFERENCE   2  (residues 1 to 771)
  AUTHORS   Gorodkin J, Cirera S, Hedegaard J, Gilchrist MJ, Panitz F,
            Jorgensen C, Scheibye-Knudsen K, Arvin T, Lumholdt S, Sawera M,
            Green T, Nielsen BJ, Havgaard JH, Rosenkilde C, Wang J, Li H, Li R,
            Liu B, Hu S, Dong W, Li W, Yu J, Wang J, Staefeldt HH, Wernersson
            R, Madsen LB, Thomsen B, Hornshoj H, Bujie Z, Wang X, Wang X,
            Bolund L, Brunak S, Yang H, Bendixen C and Fredholm M.
  TITLE     Porcine transcriptome analysis based on 97 non-normalized cDNA
            libraries and assembly of 1,021,891 expressed sequence tags
  JOURNAL   Genome Biol 8 (4), R45 (2007)
   PUBMED   17407547
REFERENCE   3  (residues 1 to 771)
  AUTHORS   Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H,
            Okumura N, Hamasima N and Awata T.
  TITLE     PEDE (Pig EST Data Explorer): construction of a database for ESTs
            derived from porcine full-length cDNA libraries
  JOURNAL   Nucleic Acids Res 32 (Database issue), D484-D488 (2004)
   PUBMED   14681463
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK349503.1, FS710052.1 and EW497662.2.
            
            On Aug 14, 2011 this sequence version replaced XP_003132578.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK349503.1, SRR5120058.166521.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA103886159 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Sus scrofa"
                     /db_xref="taxon:9823"
                     /chromosome="13"
                     /map="13"
     Protein         1..771
                     /product="solute carrier family 7 member 14"
                     /note="probable cationic amino acid transporter; solute
                     carrier family 7 (orphan transporter), member 14"
                     /calculated_mol_wt=84129
     Region          48..677
                     /region_name="2A0303"
                     /note="cationic amino acid transport permease; TIGR00906"
                     /db_xref="CDD:273330"
     CDS             1..771
                     /gene="SLC7A14"
                     /coded_by="NM_001243461.1:368..2683"
                     /db_xref="GeneID:100153975"
                     /db_xref="VGNC:VGNC:93173"
ORIGIN      
        1 msgfltsldp rrvqwgaawy amysrilrtk pvesmlegtg tttahgtkla qvlttmdlis
       61 lgvgscvgtg myvvsglvak emagpgvivs fiiaalasil sgvcyaefgv rvpkttgsay
      121 tysyvtvgef vaffigwnli leyligtaag asalssmfds lanhtisrwm vdsvgtlngl
      181 gkgeqsypdl lalviaiivt vivalgvkns vgfnnvlnvl nlavwvfimi agfffingky
      241 waegrflphg wsgvlqgaat cfyafigfdi iattgeeakn pntsipyait asliicltay
      301 vsvsmiltlm vpydaidtes plmemfvarg fyaakfvvai gsvagltvsl lgslfpmprv
      361 iyamagdgll frflahvssy tetpvvaciv sgflaallsl lvslrdliem msigtllayt
      421 lvsvcvlllr yqpesdidgf vkflseehtk kkegiladce kevcspvseg eefsgpatnt
      481 cgaknlpslg dnemligksd kstynvnhpn ygtvdmttgi eadeseniyl iklkkligpr
      541 yytmrirlgl pgkmdrptaa tghtvticvl llfilmfifc sfiifgsdyi seqswwaill
      601 vilmvllisa lvfvilqqpe npkklpymap clpfvpafam lvniylmlkl stitwirfav
      661 wcfvgmliyf gygiwnstle isareealhq smyqrydvdd pfsveegfsy ategesqenw
      721 ggpaedkgfy yqqmsdaqan trtsskaksk skhkqnseal iandeldysp e
//
LOCUS       NP_001239423            1606 aa            linear   ROD 13-NOV-2023
DEFINITION  rap guanine nucleotide exchange factor 6 isoform 1 [Mus musculus].
ACCESSION   NP_001239423
VERSION     NP_001239423.1
DBSOURCE    REFSEQ: accession NM_001252494.2
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 1606)
  AUTHORS   Ishihara S, Sato T, Du G, Guardavaccaro D, Nakajima A, Sawai S,
            Kataoka T and Katagiri K.
  TITLE     Phosphatidic acid-dependent localization and basal
            de-phosphorylation of RA-GEFs regulate lymphocyte trafficking
  JOURNAL   BMC Biol 18 (1), 75 (2020)
   PUBMED   32600317
  REMARK    GeneRIF: Phosphatidic acid-dependent localization and basal
            de-phosphorylation of RA-GEFs regulate lymphocyte trafficking.
            Publication Status: Online-Only
REFERENCE   2  (residues 1 to 1606)
  AUTHORS   Maeta K, Hattori S, Ikutomo J, Edamatsu H, Bilasy SE, Miyakawa T
            and Kataoka T.
  TITLE     Comprehensive behavioral analysis of mice deficient in Rapgef2 and
            Rapgef6, a subfamily of guanine nucleotide exchange factors for Rap
            small GTPases possessing the Ras/Rap-associating domain
  JOURNAL   Mol Brain 11 (1), 27 (2018)
   PUBMED   29747665
  REMARK    GeneRIF: Rapgef2-conditional knockout (cKO) mice and Rapgef6-KO
            mice exhibited hyperlocomotion phenotype and working-memory defect,
            both of which could be recognized as schizophrenia-like behavior.
            Publication Status: Online-Only
REFERENCE   3  (residues 1 to 1606)
  AUTHORS   Quesnel-Vallieres M, Dargaei Z, Irimia M, Gonatopoulos-Pournatzis
            T, Ip JY, Wu M, Sterne-Weiler T, Nakagawa S, Woodin MA, Blencowe BJ
            and Cordes SP.
  TITLE     Misregulation of an Activity-Dependent Splicing Network as a Common
            Mechanism Underlying Autism Spectrum Disorders
  JOURNAL   Mol Cell 64 (6), 1023-1034 (2016)
   PUBMED   27984743
REFERENCE   4  (residues 1 to 1606)
  AUTHORS   Maeta K, Edamatsu H, Nishihara K, Ikutomo J, Bilasy SE and Kataoka
            T.
  TITLE     Crucial Role of Rapgef2 and Rapgef6, a Family of Guanine Nucleotide
            Exchange Factors for Rap1 Small GTPase, in Formation of Apical
            Surface Adherens Junctions and Neural Progenitor Development in the
            Mouse Cerebral Cortex
  JOURNAL   eNeuro 3 (3) (2016)
   PUBMED   27390776
  REMARK    GeneRIF: Study show that double knockout of Rapgef6 in Rapgef2-cKO
            mice (Rapgef2/6-dKO) results in marked enlargement of the ectopic
            cortical mass. While Rapgef2-cKO affects late-born neurons only,
            Rapgef2/6-dKO affects both early-born and late-born neurons in the
            developing brain.
            Publication Status: Online-Only
REFERENCE   5  (residues 1 to 1606)
  AUTHORS   Levy RJ, Kvajo M, Li Y, Tsvetkov E, Dong W, Yoshikawa Y, Kataoka T,
            Bolshakov VY, Karayiorgou M and Gogos JA.
  TITLE     Deletion of Rapgef6, a candidate schizophrenia susceptibility gene,
            disrupts amygdala function in mice
  JOURNAL   Transl Psychiatry 5 (6), e577 (2015)
   PUBMED   26057047
  REMARK    GeneRIF: Rapgef6 deletion mice were impaired in hippocampal and
            amygdalar function and had reduced spine density and primary
            dendrite number in pyramidal neurons of the CA3 hippocampal region.
            Publication Status: Online-Only
REFERENCE   6  (residues 1 to 1606)
  AUTHORS   Okada K, Miyake H, Yamaguchi K, Chiba K, Maeta K, Bilasy SE,
            Edamatsu H, Kataoka T and Fujisawa M.
  TITLE     Critical function of RA-GEF-2/Rapgef6, a guanine nucleotide
            exchange factor for Rap1, in mouse spermatogenesis
  JOURNAL   Biochem Biophys Res Commun 445 (1), 89-94 (2014)
   PUBMED   24491570
  REMARK    GeneRIF: Data indicate that the testes of RA-GEF-2(-)knockout male
            mice were significantly smaller than those of wild-type mice and
            were markedly atrophied as well as hypospermatogenic.
REFERENCE   7  (residues 1 to 1606)
  AUTHORS   Nakano Y, Jahan I, Bonde G, Sun X, Hildebrand MS, Engelhardt JF,
            Smith RJ, Cornell RA, Fritzsch B and Banfi B.
  TITLE     A mutation in the Srrm4 gene causes alternative splicing defects
            and deafness in the Bronx waltzer mouse
  JOURNAL   PLoS Genet 8 (10), e1002966 (2012)
   PUBMED   23055939
REFERENCE   8  (residues 1 to 1606)
  AUTHORS   Yoshikawa Y, Satoh T, Tamura T, Wei P, Bilasy SE, Edamatsu H, Aiba
            A, Katagiri K, Kinashi T, Nakao K and Kataoka T.
  TITLE     The M-Ras-RA-GEF-2-Rap1 pathway mediates tumor necrosis
            factor-alpha dependent regulation of integrin activation in
            splenocytes
  JOURNAL   Mol Biol Cell 18 (8), 2949-2959 (2007)
   PUBMED   17538012
  REMARK    GeneRIF: These findings proved a crucial role of the cross-talk
            between two Ras-family GTPases M-Ras and Rap1, mediated by
            RA-GEF-2, in adhesion signaling.
REFERENCE   9  (residues 1 to 1606)
  AUTHORS   Stryke D, Kawamoto M, Huang CC, Johns SJ, King LA, Harper CA, Meng
            EC, Lee RE, Yee A, L'Italien L, Chuang PT, Young SG, Skarnes WC,
            Babbitt PC and Ferrin TE.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   10 (residues 1 to 1606)
  AUTHORS   Piao Y, Ko NT, Lim MK and Ko MS.
  TITLE     Construction of long-transcript enriched cDNA libraries from
            submicrogram amounts of total RNAs by a universal PCR amplification
            method
  JOURNAL   Genome Res 11 (9), 1553-1558 (2001)
   PUBMED   11544199
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL596127.12 and AL607091.12.
            
            Transcript Variant: This variant (1) encodes the longest isoform
            (1).
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC141182.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164131, SAMN01164132
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1606
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 32.13 cM"
     Protein         1..1606
                     /product="rap guanine nucleotide exchange factor 6 isoform
                     1"
                     /note="rap guanine nucleotide exchange factor 2; PDZ
                     domain containing guanine nucleotide exchange factor (GEF)
                     2; PDZ domain containing guanine nucleotide exchange
                     factor(GEF)1"
                     /calculated_mol_wt=179683
     Region          37..>82
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cl00047"
                     /db_xref="CDD:469590"
     Region          280..380
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(345..346,355..357)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Region          412..525
                     /region_name="RasGEFN"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     GTPases; N-terminal motif; smart00229"
                     /db_xref="CDD:214571"
     Site            order(431,468,472..473,476,479..480,515..516,519)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:100121"
     Region          529..611
                     /region_name="PDZ_RapGEF2_RapGEF6-like"
                     /note="PDZ domain of Rap guanine nucleotide exchange
                     factor 2 and Rap guanine nucleotide exchange factor 6, and
                     related domains; cd06755"
                     /db_xref="CDD:467237"
     Site            order(541..547,559,562,591,595,598..599)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467237"
     Region          756..838
                     /region_name="RA_PDZ-GEF1"
                     /note="Ras-associating (RA) domain found in PDZ
                     domain-containing guanine nucleotide exchange factor 1
                     (PDZ-GEF1) and similar proteins; cd01785"
                     /db_xref="CDD:340483"
     Region          862..1072
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases. Small GTP-binding proteins of the Ras
                     superfamily function as molecular switches in fundamental
                     events such as signal transduction, cytoskeleton dynamics
                     and intracellular trafficking; cd00155"
                     /db_xref="CDD:238087"
     Site            order(894..896,905..906,908..910,912..913,916..917,920,
                     953,956..957,959..961,963..966,968..969,989,992,997..999,
                     1002,1017..1019,1022..1024,1026..1028,1030..1033,1047,
                     1051)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     CDS             1..1606
                     /gene="Rapgef6"
                     /gene_synonym="A530068K01; C030018K18Rik; mKIAA4052;
                     PDZ-GEF2; Pdzgef2; RA-GEF-2; Ragef2"
                     /coded_by="NM_001252494.2:162..4982"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /db_xref="CCDS:CCDS83809.1"
                     /db_xref="GeneID:192786"
                     /db_xref="MGI:MGI:2384761"
ORIGIN      
        1 mnspvdpgar qalrkkpper tpedlniiys ylhgmeilsn lrehqlrlms traryerysg
       61 nqmlfcseti arcwyillsg svlvkdsmvl ppcsfgkqfg gkrgcdclvl epsemivven
      121 skdnedsilq reiparqsrr rfrkinykge rqtiidgvdi nnylslpadl tkmhltdnph
      181 pqvthvsssq sgcsiasdsg ssslsdiyqa tesevgdvdl trlpegpvds edeeeeeeei
      241 drtdplqgrd lvreclekep adktdddveq llefmhqlpa fanmtmsvrr elcsvmvfev
      301 veqagavile dgqeldswyv ilngtveish pdgkienlfm gnsfgivptl dkqhmhgavr
      361 tkvddcqfvc iaqqdywril nhveknthkv eeegeivmvh ehreldrsgt rkghivikat
      421 perlimhlie ehsivdptyi edflltyrtf letpldvgik llewfkidnl rdkvtrivll
      481 wvnnhfndfe gdpamtqfle efernledtk mnghlrllni acaakakwrq vvlqkasres
      541 plhfcltggs ekgfgvfvee vesgskaada glkrgdqvme vngqnfenit lakaleilrn
      601 nthlaltvkt nifvfkells rteqeksgvp hipkiaekks nrhsiqdvpg dmeqapqekg
      661 nkkikantvs ggrnkirkil dktrfsilpp klfsdgglsq sqddsivgtr hcrhslaimp
      721 ipgtlssssp dllqpttsml dfsnpsavgf yyipdqvirv fkadqqscyi iiskdttake
      781 vvcqavqefg ltgasdtysl cevsvtpegv ikqrrlpdqf skladriqln gryylknnme
      841 tetlcsdeda qellkesqls mlqlstieva tqlsmrdfdl frniepteyi ddlfkldskt
      901 gnthlkqfed ivnqetfwva seilsesnql krmkiikhfi kialhcreck nfnsmfaiis
      961 glnlapvarl rgtweklpsk yekhlqdlqd lfdpsrnmak yrnilssqsm qppiiplfpv
     1021 vkkdmtflhe gndskvdglv nfeklrmiak eirhiirmts anmdpammfr qrslsqgstn
     1081 snmldvqgga hkkrarrssl lnakklyeda qmarkvkqyl ssldidtdee kfqmmslqwe
     1141 paygtltknl tekrsaksse mspvplrsvg qtakvhlhqp hrvsqvlqvp avnlhpirkk
     1201 gqakdhvlst slpqkglgpt eevsvkkhte dtisvasslh ssppaspqns prkgytltps
     1261 skcdnlsdss hseissrssi vsngsvdsms aagqdercss hslavpeptg alektdhpsg
     1321 isdhsqlahg wmlskpclik gvavssslss eemshehvvl eaadsgrgsw tscsssshdn
     1381 fqslqnqksw dflnsyrhmh lddpiaevep tdcepcacpk gcsrtcgqck gsletnqlrq
     1441 swasssslsd tcepnygtvk rrvlesapae apdgleprdt tdpvyktvts stdkglivyc
     1501 vtspkkgdry reppptppgy lgisladlke gphphlkppd ysvavqrskm mlnslsrlpp
     1561 appsshtsaw vpskigsqpq rhshpkladv adadseaden eqvsav
//
LOCUS       NP_001361460             103 aa            linear   MAM 13-NOV-2023
DEFINITION  H4 clustered histone 3 [Bos taurus].
ACCESSION   NP_001361460
VERSION     NP_001361460.1
DBSOURCE    REFSEQ: accession NM_001374531.1
KEYWORDS    RefSeq.
SOURCE      Bos taurus (domestic cattle)
  ORGANISM  Bos taurus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Bovidae; Bovinae; Bos.
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from NKLS02000023.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
FEATURES             Location/Qualifiers
     source          1..103
                     /organism="Bos taurus"
                     /db_xref="taxon:9913"
                     /chromosome="23"
                     /map="23"
                     /breed="Hereford"
     Protein         1..103
                     /product="H4 clustered histone 3"
                     /note="histone H4"
                     /calculated_mol_wt=11236
     Region          1..103
                     /region_name="PLN00035"
                     /note="histone H4; Provisional"
                     /db_xref="CDD:177669"
     CDS             1..103
                     /gene="H4C3"
                     /coded_by="NM_001374531.1:18..329"
                     /db_xref="GeneID:115945166"
                     /db_xref="VGNC:VGNC:84553"
ORIGIN      
        1 msgrgkggkg lgkggakrhr kvlrdniqgi tkpairrlar rggvkrisgl iyeetrgvlk
       61 vflenvirda vtytehakrk tvtamdvvya lkrqgrtlyg fgg
//
LOCUS       NP_001099881             209 aa            linear   ROD 14-NOV-2023
DEFINITION  probable glutathione peroxidase 8 [Rattus norvegicus].
ACCESSION   NP_001099881 XP_001067684 XP_215486
VERSION     NP_001099881.1
DBSOURCE    REFSEQ: accession NM_001106411.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (residues 1 to 209)
  AUTHORS   Cueto-Urena C, Ramirez-Exposito MJ, Mayas MD, Carrera-Gonzalez MP,
            Godoy-Hurtado A and Martinez-Martos JM.
  TITLE     Glutathione Peroxidase gpx1 to gpx8 Genes Expression in
            Experimental Brain Tumors Reveals Gender-Dependent Patterns
  JOURNAL   Genes (Basel) 14 (9), 1674 (2023)
   PUBMED   37761814
  REMARK    GeneRIF: Glutathione Peroxidase gpx1 to gpx8 Genes Expression in
            Experimental Brain Tumors Reveals Gender-Dependent Patterns.
            Publication Status: Online-Only
REFERENCE   2  (residues 1 to 209)
  AUTHORS   Mehmeti I, Lortz S, Avezov E, Jorns A and Lenzen S.
  TITLE     ER-resident antioxidative GPx7 and GPx8 enzyme isoforms protect
            insulin-secreting INS-1E beta-cells against lipotoxicity by
            improving the ER antioxidative capacity
  JOURNAL   Free Radic Biol Med 112, 121-130 (2017)
   PUBMED   28751022
  REMARK    GeneRIF: Endoplasmic reticulum (ER)-resident antioxidative GPx7 and
            GPx8 enzyme isoforms protect insulin-secreting beta-cells against
            lipotoxicity by improving the ER antioxidative capacity.
REFERENCE   3  (residues 1 to 209)
  AUTHORS   Nguyen VD, Saaranen MJ, Karala AR, Lappi AK, Wang L, Raykhel IB,
            Alanen HI, Salo KE, Wang CC and Ruddock LW.
  TITLE     Two endoplasmic reticulum PDI peroxidases increase the efficiency
            of the use of peroxide during disulfide bond formation
  JOURNAL   J Mol Biol 406 (3), 503-515 (2011)
   PUBMED   21215271
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473955.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XP_215486.2, XP_001067684.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ229597.1, FQ220265.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760389, SAMEA5760393
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Rattus norvegicus"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q14"
     Protein         1..209
                     /product="probable glutathione peroxidase 8"
                     /EC_number="1.11.1.9"
                     /calculated_mol_wt=24012
     Region          46..198
                     /region_name="gpx7"
                     /note="putative glutathione peroxidase Gpx7; TIGR02540"
                     /db_xref="CDD:131592"
     Site            order(79,114,164)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:238207"
     Site            order(113,116,118,121,124,128)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238207"
     CDS             1..209
                     /gene="Gpx8"
                     /gene_synonym="RGD1307506"
                     /coded_by="NM_001106411.1:34..663"
                     /db_xref="GeneID:294744"
                     /db_xref="RGD:1307506"
ORIGIN      
        1 meplgayplk csgpkakifa vllsmvlctv mlfllqlkfl kprinsfysf evkdakgrmv
       61 slekfkgkas lvvnvasdcr ftdksyetlr elhkefgpyh fnvlafpcnq fgesepkssk
      121 evesfarkny gvtfpifhki kilgpeaepa frflvdsskk eprwnfwkyl vnpegqvvkf
      181 wrpeepleai rphvsqmigq iilkkkedl
//
LOCUS       NP_001361462             136 aa            linear   MAM 14-NOV-2023
DEFINITION  H3 clustered histone 6 [Bos taurus].
ACCESSION   NP_001361462
VERSION     NP_001361462.1
DBSOURCE    REFSEQ: accession NM_001374533.1
KEYWORDS    RefSeq.
SOURCE      Bos taurus (domestic cattle)
  ORGANISM  Bos taurus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Bovidae; Bovinae; Bos.
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from NKLS02000023.1.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Bos taurus"
                     /db_xref="taxon:9913"
                     /chromosome="23"
                     /map="23"
                     /breed="Hereford"
     Protein         1..136
                     /product="H3 clustered histone 6"
                     /note="histone H3"
                     /calculated_mol_wt=15273
     Region          1..136
                     /region_name="PTZ00018"
                     /note="histone H3; Provisional"
                     /db_xref="CDD:185400"
     Site            order(40..48,50,64..67,70,73,84..87,117..119,121)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:467036"
     Site            order(45,48,51..52,55..56,58,60,62..63,67..68,70..72,
                     74..75,77,79,82..86,88..89,92..93,96..98,100..102,
                     104..106,109,118..122,126,129)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:467036"
     Site            order(49,52..53,56..57,59,95,99,102,109,113,118)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467036"
     Site            order(107,110..111,114..115,117,123..124,127..128,
                     130..132)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:467036"
     CDS             1..136
                     /gene="H3C6"
                     /coded_by="NM_001374533.1:47..457"
                     /db_xref="GeneID:115945167"
                     /db_xref="VGNC:VGNC:84555"
ORIGIN      
        1 martkqtark stggkaprkq latkaarksa patggvkkph ryrpgtvalr eirryqkste
       61 llirklpfqr lvreiaqdfk tdlrfqssav malqeaceay lvglfedtnl caihakrvti
      121 mpkdiqlarr irgera
//
LOCUS       NP_001100143             186 aa            linear   ROD 14-NOV-2023
DEFINITION  glutathione peroxidase 7 precursor [Rattus norvegicus].
ACCESSION   NP_001100143 XP_001060175 XP_216473
VERSION     NP_001100143.1
DBSOURCE    REFSEQ: accession NM_001106673.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (residues 1 to 186)
  AUTHORS   Cueto-Urena C, Ramirez-Exposito MJ, Mayas MD, Carrera-Gonzalez MP,
            Godoy-Hurtado A and Martinez-Martos JM.
  TITLE     Glutathione Peroxidase gpx1 to gpx8 Genes Expression in
            Experimental Brain Tumors Reveals Gender-Dependent Patterns
  JOURNAL   Genes (Basel) 14 (9), 1674 (2023)
   PUBMED   37761814
  REMARK    GeneRIF: Glutathione Peroxidase gpx1 to gpx8 Genes Expression in
            Experimental Brain Tumors Reveals Gender-Dependent Patterns.
            Publication Status: Online-Only
REFERENCE   2  (residues 1 to 186)
  AUTHORS   Mehmeti I, Lortz S, Avezov E, Jorns A and Lenzen S.
  TITLE     ER-resident antioxidative GPx7 and GPx8 enzyme isoforms protect
            insulin-secreting INS-1E beta-cells against lipotoxicity by
            improving the ER antioxidative capacity
  JOURNAL   Free Radic Biol Med 112, 121-130 (2017)
   PUBMED   28751022
  REMARK    GeneRIF: Endoplasmic reticulum (ER)-resident antioxidative GPx7 and
            GPx8 enzyme isoforms protect insulin-secreting beta-cells against
            lipotoxicity by improving the ER antioxidative capacity.
REFERENCE   3  (residues 1 to 186)
  AUTHORS   Peng D, Belkhiri A, Hu T, Chaturvedi R, Asim M, Wilson KT, Zaika A
            and El-Rifai W.
  TITLE     Glutathione peroxidase 7 protects against oxidative DNA damage in
            oesophageal cells
  JOURNAL   Gut 61 (9), 1250-1260 (2012)
   PUBMED   22157330
REFERENCE   4  (residues 1 to 186)
  AUTHORS   Nguyen VD, Saaranen MJ, Karala AR, Lappi AK, Wang L, Raykhel IB,
            Alanen HI, Salo KE, Wang CC and Ruddock LW.
  TITLE     Two endoplasmic reticulum PDI peroxidases increase the efficiency
            of the use of peroxide during disulfide bond formation
  JOURNAL   J Mol Biol 406 (3), 503-515 (2011)
   PUBMED   21215271
REFERENCE   5  (residues 1 to 186)
  AUTHORS   Peng DF, Razvi M, Chen H, Washington K, Roessner A, Schneider-Stock
            R and El-Rifai W.
  TITLE     DNA hypermethylation regulates the expression of members of the
            Mu-class glutathione S-transferases and glutathione peroxidases in
            Barrett's adenocarcinoma
  JOURNAL   Gut 58 (1), 5-15 (2009)
   PUBMED   18664505
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474008.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XP_001060175.1, XP_216473.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ229888.1, AW142311.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16093045, SAMN16093046
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Rattus norvegicus"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q34"
     Protein         1..186
                     /product="glutathione peroxidase 7 precursor"
                     /EC_number="1.11.1.9"
                     /calculated_mol_wt=19030
     sig_peptide     1..20
                     /inference="COORDINATES: ab initio prediction:SignalP:4.0"
                     /calculated_mol_wt=2078
     Region          23..175
                     /region_name="gpx7"
                     /note="putative glutathione peroxidase Gpx7; TIGR02540"
                     /db_xref="CDD:131592"
     Site            order(56,91,141)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:238207"
     Site            order(90,93,95,98,101,105)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238207"
     CDS             1..186
                     /gene="Gpx7"
                     /coded_by="NM_001106673.1:59..619"
                     /db_xref="GeneID:298376"
                     /db_xref="RGD:1306999"
ORIGIN      
        1 mvaavatawl llwaaactqs eqdfydfkav nirgklvsle kyrgsvslvv nvasecgftd
       61 qnyralqqlq rdlgpyhfnv lafpcnqfgq qepdsnreie nfarrtysvs fpmfskiavt
      121 gtgahpafky ltqtsgkept wnfwkylvap dgkvvgawdp tvpveeikpr iteqvmklil
      181 qkredl
//
LOCUS       NP_001239425            1513 aa            linear   ROD 14-NOV-2023
DEFINITION  rap guanine nucleotide exchange factor 6 isoform 3 [Mus musculus].
ACCESSION   NP_001239425
VERSION     NP_001239425.1
DBSOURCE    REFSEQ: accession NM_001252496.2
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 1513)
  AUTHORS   Ishihara S, Sato T, Du G, Guardavaccaro D, Nakajima A, Sawai S,
            Kataoka T and Katagiri K.
  TITLE     Phosphatidic acid-dependent localization and basal
            de-phosphorylation of RA-GEFs regulate lymphocyte trafficking
  JOURNAL   BMC Biol 18 (1), 75 (2020)
   PUBMED   32600317
  REMARK    GeneRIF: Phosphatidic acid-dependent localization and basal
            de-phosphorylation of RA-GEFs regulate lymphocyte trafficking.
            Publication Status: Online-Only
REFERENCE   2  (residues 1 to 1513)
  AUTHORS   Maeta K, Hattori S, Ikutomo J, Edamatsu H, Bilasy SE, Miyakawa T
            and Kataoka T.
  TITLE     Comprehensive behavioral analysis of mice deficient in Rapgef2 and
            Rapgef6, a subfamily of guanine nucleotide exchange factors for Rap
            small GTPases possessing the Ras/Rap-associating domain
  JOURNAL   Mol Brain 11 (1), 27 (2018)
   PUBMED   29747665
  REMARK    GeneRIF: Rapgef2-conditional knockout (cKO) mice and Rapgef6-KO
            mice exhibited hyperlocomotion phenotype and working-memory defect,
            both of which could be recognized as schizophrenia-like behavior.
            Publication Status: Online-Only
REFERENCE   3  (residues 1 to 1513)
  AUTHORS   Quesnel-Vallieres M, Dargaei Z, Irimia M, Gonatopoulos-Pournatzis
            T, Ip JY, Wu M, Sterne-Weiler T, Nakagawa S, Woodin MA, Blencowe BJ
            and Cordes SP.
  TITLE     Misregulation of an Activity-Dependent Splicing Network as a Common
            Mechanism Underlying Autism Spectrum Disorders
  JOURNAL   Mol Cell 64 (6), 1023-1034 (2016)
   PUBMED   27984743
REFERENCE   4  (residues 1 to 1513)
  AUTHORS   Maeta K, Edamatsu H, Nishihara K, Ikutomo J, Bilasy SE and Kataoka
            T.
  TITLE     Crucial Role of Rapgef2 and Rapgef6, a Family of Guanine Nucleotide
            Exchange Factors for Rap1 Small GTPase, in Formation of Apical
            Surface Adherens Junctions and Neural Progenitor Development in the
            Mouse Cerebral Cortex
  JOURNAL   eNeuro 3 (3) (2016)
   PUBMED   27390776
  REMARK    GeneRIF: Study show that double knockout of Rapgef6 in Rapgef2-cKO
            mice (Rapgef2/6-dKO) results in marked enlargement of the ectopic
            cortical mass. While Rapgef2-cKO affects late-born neurons only,
            Rapgef2/6-dKO affects both early-born and late-born neurons in the
            developing brain.
            Publication Status: Online-Only
REFERENCE   5  (residues 1 to 1513)
  AUTHORS   Levy RJ, Kvajo M, Li Y, Tsvetkov E, Dong W, Yoshikawa Y, Kataoka T,
            Bolshakov VY, Karayiorgou M and Gogos JA.
  TITLE     Deletion of Rapgef6, a candidate schizophrenia susceptibility gene,
            disrupts amygdala function in mice
  JOURNAL   Transl Psychiatry 5 (6), e577 (2015)
   PUBMED   26057047
  REMARK    GeneRIF: Rapgef6 deletion mice were impaired in hippocampal and
            amygdalar function and had reduced spine density and primary
            dendrite number in pyramidal neurons of the CA3 hippocampal region.
            Publication Status: Online-Only
REFERENCE   6  (residues 1 to 1513)
  AUTHORS   Okada K, Miyake H, Yamaguchi K, Chiba K, Maeta K, Bilasy SE,
            Edamatsu H, Kataoka T and Fujisawa M.
  TITLE     Critical function of RA-GEF-2/Rapgef6, a guanine nucleotide
            exchange factor for Rap1, in mouse spermatogenesis
  JOURNAL   Biochem Biophys Res Commun 445 (1), 89-94 (2014)
   PUBMED   24491570
  REMARK    GeneRIF: Data indicate that the testes of RA-GEF-2(-)knockout male
            mice were significantly smaller than those of wild-type mice and
            were markedly atrophied as well as hypospermatogenic.
REFERENCE   7  (residues 1 to 1513)
  AUTHORS   Nakano Y, Jahan I, Bonde G, Sun X, Hildebrand MS, Engelhardt JF,
            Smith RJ, Cornell RA, Fritzsch B and Banfi B.
  TITLE     A mutation in the Srrm4 gene causes alternative splicing defects
            and deafness in the Bronx waltzer mouse
  JOURNAL   PLoS Genet 8 (10), e1002966 (2012)
   PUBMED   23055939
REFERENCE   8  (residues 1 to 1513)
  AUTHORS   Yoshikawa Y, Satoh T, Tamura T, Wei P, Bilasy SE, Edamatsu H, Aiba
            A, Katagiri K, Kinashi T, Nakao K and Kataoka T.
  TITLE     The M-Ras-RA-GEF-2-Rap1 pathway mediates tumor necrosis
            factor-alpha dependent regulation of integrin activation in
            splenocytes
  JOURNAL   Mol Biol Cell 18 (8), 2949-2959 (2007)
   PUBMED   17538012
  REMARK    GeneRIF: These findings proved a crucial role of the cross-talk
            between two Ras-family GTPases M-Ras and Rap1, mediated by
            RA-GEF-2, in adhesion signaling.
REFERENCE   9  (residues 1 to 1513)
  AUTHORS   Stryke D, Kawamoto M, Huang CC, Johns SJ, King LA, Harper CA, Meng
            EC, Lee RE, Yee A, L'Italien L, Chuang PT, Young SG, Skarnes WC,
            Babbitt PC and Ferrin TE.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   10 (residues 1 to 1513)
  AUTHORS   Piao Y, Ko NT, Lim MK and Ko MS.
  TITLE     Construction of long-transcript enriched cDNA libraries from
            submicrogram amounts of total RNAs by a universal PCR amplification
            method
  JOURNAL   Genome Res 11 (9), 1553-1558 (2001)
   PUBMED   11544199
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL596127.12 and AL607091.12.
            
            Transcript Variant: This variant (3) has multiple differences in
            the coding region but maintains the reading frame, compared to
            variant 1. The resulting isoform (3) is shorter than isoform 1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC145503.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164131, SAMN01164132
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1513
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 32.13 cM"
     Protein         1..1513
                     /product="rap guanine nucleotide exchange factor 6 isoform
                     3"
                     /note="rap guanine nucleotide exchange factor 2; PDZ
                     domain containing guanine nucleotide exchange factor (GEF)
                     2; PDZ domain containing guanine nucleotide exchange
                     factor(GEF)1"
                     /calculated_mol_wt=169769
     Region          37..>82
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cl00047"
                     /db_xref="CDD:469590"
     Region          280..380
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(345..346,355..357)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Region          412..525
                     /region_name="RasGEFN"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     GTPases; N-terminal motif; smart00229"
                     /db_xref="CDD:214571"
     Site            order(431,468,472..473,476,479..480,515..516,519)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:100121"
     Region          529..611
                     /region_name="PDZ_RapGEF2_RapGEF6-like"
                     /note="PDZ domain of Rap guanine nucleotide exchange
                     factor 2 and Rap guanine nucleotide exchange factor 6, and
                     related domains; cd06755"
                     /db_xref="CDD:467237"
     Site            order(541..547,559,562,591,595,598..599)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467237"
     Region          756..838
                     /region_name="RA_PDZ-GEF1"
                     /note="Ras-associating (RA) domain found in PDZ
                     domain-containing guanine nucleotide exchange factor 1
                     (PDZ-GEF1) and similar proteins; cd01785"
                     /db_xref="CDD:340483"
     Region          862..1086
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases. Small GTP-binding proteins of the Ras
                     superfamily function as molecular switches in fundamental
                     events such as signal transduction, cytoskeleton dynamics
                     and intracellular trafficking; cd00155"
                     /db_xref="CDD:238087"
     Site            order(894..896,905..906,908..910,912..913,916..917,920,
                     953,956..957,959..961,963..966,968..969,989,992,997..999,
                     1002,1017..1019,1022..1024,1026..1028,1030..1033,1047,
                     1051,1084)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     CDS             1..1513
                     /gene="Rapgef6"
                     /gene_synonym="A530068K01; C030018K18Rik; mKIAA4052;
                     PDZ-GEF2; Pdzgef2; RA-GEF-2; Ragef2"
                     /coded_by="NM_001252496.2:162..4703"
                     /note="isoform 3 is encoded by transcript variant 3"
                     /db_xref="GeneID:192786"
                     /db_xref="MGI:MGI:2384761"
ORIGIN      
        1 mnspvdpgar qalrkkpper tpedlniiys ylhgmeilsn lrehqlrlms traryerysg
       61 nqmlfcseti arcwyillsg svlvkdsmvl ppcsfgkqfg gkrgcdclvl epsemivven
      121 skdnedsilq reiparqsrr rfrkinykge rqtiidgvdi nnylslpadl tkmhltdnph
      181 pqvthvsssq sgcsiasdsg ssslsdiyqa tesevgdvdl trlpegpvds edeeeeeeei
      241 drtdplqgrd lvreclekep adktdddveq llefmhqlpa fanmtmsvrr elcsvmvfev
      301 veqagavile dgqeldswyv ilngtveish pdgkienlfm gnsfgivptl dkqhmhgavr
      361 tkvddcqfvc iaqqdywril nhveknthkv eeegeivmvh ehreldrsgt rkghivikat
      421 perlimhlie ehsivdptyi edflltyrtf letpldvgik llewfkidnl rdkvtrivll
      481 wvnnhfndfe gdpamtqfle efernledtk mnghlrllni acaakakwrq vvlqkasres
      541 plhfcltggs ekgfgvfvee vesgskaada glkrgdqvme vngqnfenit lakaleilrn
      601 nthlaltvkt nifvfkells rteqeksgvp hipkiaekks nrhsiqdvpg dmeqapqekg
      661 nkkikantvs ggrnkirkil dktrfsilpp klfsdgglsq sqddsivgtr hcrhslaimp
      721 ipgtlssssp dllqpttsml dfsnpsavgf yyipdqvirv fkadqqscyi iiskdttake
      781 vvcqavqefg ltgasdtysl cevsvtpegv ikqrrlpdqf skladriqln gryylknnme
      841 tetlcsdeda qellkesqls mlqlstieva tqlsmrdfdl frniepteyi ddlfkldskt
      901 gnthlkqfed ivnqetfwva seilsesnql krmkiikhfi kialhcreck nfnsmfaiis
      961 glnlapvarl rgtweklpsk yekhlqdlqd lfdpsrnmak yrnilssqsm qppiiplfpv
     1021 vkkdmtflhe gndskvdglv nfeklrmiak eirhiirmts anmdpammfr qrkkrwrslg
     1081 slsqgstnsn mldvqggahk krarrsslln akklyedaqm arkvkqylss ldidtdeekf
     1141 qmmslqwepa ygtltknlte krsakssems pvplrsvgqt akvhlhqphr vsqvlqvpav
     1201 nlhpirkkgq akdhvlstsl pqkglgptee vsvkkhtedt isvasslhss ppaspqnspr
     1261 kgytltpssk cdnlsdsshs eissrssivs ngsvdsmsaa gqdercsshs lavpeptgal
     1321 ektdhpsgis dhsqlahgwm lskpclikgv avssslssee mshehvvlea adsgrgswts
     1381 csssshdnfq slqnqkswdf lnsyrhmhld dpiaeveptd cepcacpkgc srtcgqckgs
     1441 letnqlrqsw asssslsdtc epnygtvkrr vlesapaeap dgleprdttd pvyktvtsst
     1501 dkglieneqv sav
//
LOCUS       NP_001412295             401 aa            linear   PRI 15-NOV-2023
DEFINITION  heat shock transcription factor, Y-linked [Macaca mulatta].
ACCESSION   NP_001412295 XP_014984150
VERSION     NP_001412295.1
DBSOURCE    REFSEQ: accession NM_001425366.1
KEYWORDS    RefSeq.
SOURCE      Macaca mulatta (Rhesus monkey)
  ORGANISM  Macaca mulatta
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Cercopithecidae; Cercopithecinae; Macaca.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC217130.4.
            
            On Nov 15, 2023 this sequence version replaced XP_014984150.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FJ527015.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA4688380, SAMEA4688385
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Macaca mulatta"
                     /db_xref="taxon:9544"
                     /chromosome="Y"
                     /map="Y"
     Protein         1..401
                     /product="heat shock transcription factor, Y-linked"
                     /note="heat shock transcription factor, Y-linked 1"
                     /calculated_mol_wt=45255
     Region          80..194
                     /region_name="HSF_DNA-bind"
                     /note="HSF-type DNA-binding; pfam00447"
                     /db_xref="CDD:459813"
     CDS             1..401
                     /gene="LOC100270696"
                     /gene_synonym="HSFY; HSFY1"
                     /coded_by="NM_001425366.1:69..1274"
                     /db_xref="GeneID:100270696"
ORIGIN      
        1 mehgssetqg fspkdeltvs eastrsplce htfsgdsdlr smieenafqv lsqgfllkrp
       61 cytvcvsepd kdndffsltf prklwkives dqfksvswde ngtciminee lfkkeilerk
      121 hpyrifqtds irsfvrqlni ygfskirqnf qrsaflptfl aeekessvlt klkcyynphf
      181 krgcpqllvr vkrridvkna sltptlfhed fnqkhfraga nmenhnpala aevseeslfa
      241 tstnlnmslt ressvgkiia sssdpiisgf lppsrstsig pseqsatdqr ailnqlstih
      301 mhshstymqa rgrivnfitt ttsqyhiisp fqncflgltl espavptryp vvsvnqaphp
      361 nllpagnrwl qmstiadiss splsrpatqp spldkyhtny n
//
LOCUS       NP_001412296             401 aa            linear   PRI 15-NOV-2023
DEFINITION  heat shock transcription factor, Y-linked-like [Macaca mulatta].
ACCESSION   NP_001412296 XP_014984149
VERSION     NP_001412296.1
DBSOURCE    REFSEQ: accession NM_001425367.1
KEYWORDS    RefSeq.
SOURCE      Macaca mulatta (Rhesus monkey)
  ORGANISM  Macaca mulatta
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Cercopithecidae; Cercopithecinae; Macaca.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC232762.8.
            
            On Nov 15, 2023 this sequence version replaced XP_014984149.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA4688479
                              [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Macaca mulatta"
                     /db_xref="taxon:9544"
                     /chromosome="Y"
                     /map="Y"
     Protein         1..401
                     /product="heat shock transcription factor, Y-linked-like"
                     /calculated_mol_wt=45638
     Region          80..194
                     /region_name="HSF_DNA-bind"
                     /note="HSF-type DNA-binding; pfam00447"
                     /db_xref="CDD:459813"
     CDS             1..401
                     /gene="LOC106995433"
                     /coded_by="NM_001425367.1:69..1274"
                     /db_xref="GeneID:106995433"
ORIGIN      
        1 mehvssetqd vspedeltds easnrsplce htfpedsdlr smieenafqv lsqgsslkrp
       61 rytacdsepd kdngffsltf prklwkives dqfksiswde ngtciminee lfkkeilerk
      121 apyrifqtds iksfirqlnl ygfskiqqnf qrsafvatfl aeekesfvls klkfyynphf
      181 krgcpqllvr vkrrigvknt slistlfned fnrkhfraga nmdnhnsala akaseeslfs
      241 tsknlnmplt ressvrqmta nssgpirsgf phpspstsvg psdeiatnqh silnqlttih
      301 mhsystymqa rghivnfitt ttshyhiisp lqnrylrllv epsaiprrch vvsvneapyp
      361 nllpagnpwl qmpvradtlt aprsrpalqp slldkyhpny n
//
LOCUS       NP_001357870            1413 aa            linear   ROD 15-NOV-2023
DEFINITION  uncharacterized protein LOC668894 [Mus musculus].
ACCESSION   NP_001357870 XP_006500577
VERSION     NP_001357870.1
DBSOURCE    REFSEQ: accession NM_001370941.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 1413)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (residues 1 to 1413)
  AUTHORS   Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, Magen
            A, Canidio E, Pagani M, Peluso I, Lin-Marq N, Koch M, Bilio M,
            Cantiello I, Verde R, De Masi C, Bianchi SA, Cicchini J, Perroud E,
            Mehmeti S, Dagand E, Schrinner S, Nurnberger A, Schmidt K, Metz K,
            Zwingmann C, Brieske N, Springer C, Hernandez AM, Herzog S, Grabbe
            F, Sieverding C, Fischer B, Schrader K, Brockmeyer M, Dettmer S,
            Helbig C, Alunni V, Battaini MA, Mura C, Henrichsen CN,
            Garcia-Lopez R, Echevarria D, Puelles E, Garcia-Calero E, Kruse S,
            Uhr M, Kauck C, Feng G, Milyaev N, Ong CK, Kumar L, Lam M, Semple
            CA, Gyenesei A, Mundlos S, Radelof U, Lehrach H, Sarmientos P,
            Reymond A, Davidson DR, Dolle P, Antonarakis SE, Yaspo ML, Martinez
            S, Baldock RA, Eichele G and Ballabio A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 1413)
  AUTHORS   Katayama S, Tomaru Y, Kasukawa T, Waki K, Nakanishi M, Nakamura M,
            Nishida H, Yap CC, Suzuki M, Kawai J, Suzuki H, Carninci P,
            Hayashizaki Y, Wells C, Frith M, Ravasi T, Pang KC, Hallinan J,
            Mattick J, Hume DA, Lipovich L, Batalov S, Engstrom PG, Mizuno Y,
            Faghihi MA, Sandelin A, Chalk AM, Mottagui-Tabar S, Liang Z,
            Lenhard B and Wahlestedt C.
  CONSRTM   RIKEN Genome Exploration Research Group; Genome Science Group
            (Genome Network Project Core Group); FANTOM Consortium
  TITLE     Antisense transcription in the mammalian transcriptome
  JOURNAL   Science 309 (5740), 1564-1566 (2005)
   PUBMED   16141073
REFERENCE   4  (residues 1 to 1413)
  AUTHORS   Carninci P, Kasukawa T, Katayama S, Gough J, Frith MC, Maeda N,
            Oyama R, Ravasi T, Lenhard B, Wells C, Kodzius R, Shimokawa K,
            Bajic VB, Brenner SE, Batalov S, Forrest AR, Zavolan M, Davis MJ,
            Wilming LG, Aidinis V, Allen JE, Ambesi-Impiombato A, Apweiler R,
            Aturaliya RN, Bailey TL, Bansal M, Baxter L, Beisel KW, Bersano T,
            Bono H, Chalk AM, Chiu KP, Choudhary V, Christoffels A, Clutterbuck
            DR, Crowe ML, Dalla E, Dalrymple BP, de Bono B, Della Gatta G, di
            Bernardo D, Down T, Engstrom P, Fagiolini M, Faulkner G, Fletcher
            CF, Fukushima T, Furuno M, Futaki S, Gariboldi M, Georgii-Hemming
            P, Gingeras TR, Gojobori T, Green RE, Gustincich S, Harbers M,
            Hayashi Y, Hensch TK, Hirokawa N, Hill D, Huminiecki L, Iacono M,
            Ikeo K, Iwama A, Ishikawa T, Jakt M, Kanapin A, Katoh M, Kawasawa
            Y, Kelso J, Kitamura H, Kitano H, Kollias G, Krishnan SP, Kruger A,
            Kummerfeld SK, Kurochkin IV, Lareau LF, Lazarevic D, Lipovich L,
            Liu J, Liuni S, McWilliam S, Madan Babu M, Madera M, Marchionni L,
            Matsuda H, Matsuzawa S, Miki H, Mignone F, Miyake S, Morris K,
            Mottagui-Tabar S, Mulder N, Nakano N, Nakauchi H, Ng P, Nilsson R,
            Nishiguchi S, Nishikawa S, Nori F, Ohara O, Okazaki Y, Orlando V,
            Pang KC, Pavan WJ, Pavesi G, Pesole G, Petrovsky N, Piazza S, Reed
            J, Reid JF, Ring BZ, Ringwald M, Rost B, Ruan Y, Salzberg SL,
            Sandelin A, Schneider C, Schonbach C, Sekiguchi K, Semple CA, Seno
            S, Sessa L, Sheng Y, Shibata Y, Shimada H, Shimada K, Silva D,
            Sinclair B, Sperling S, Stupka E, Sugiura K, Sultana R, Takenaka Y,
            Taki K, Tammoja K, Tan SL, Tang S, Taylor MS, Tegner J, Teichmann
            SA, Ueda HR, van Nimwegen E, Verardo R, Wei CL, Yagi K, Yamanishi
            H, Zabarovsky E, Zhu S, Zimmer A, Hide W, Bult C, Grimmond SM,
            Teasdale RD, Liu ET, Brusic V, Quackenbush J, Wahlestedt C, Mattick
            JS, Hume DA, Kai C, Sasaki D, Tomaru Y, Fukuda S, Kanamori-Katayama
            M, Suzuki M, Aoki J, Arakawa T, Iida J, Imamura K, Itoh M, Kato T,
            Kawaji H, Kawagashira N, Kawashima T, Kojima M, Kondo S, Konno H,
            Nakano K, Ninomiya N, Nishio T, Okada M, Plessy C, Shibata K,
            Shiraki T, Suzuki S, Tagami M, Waki K, Watahiki A, Okamura-Oho Y,
            Suzuki H, Kawai J and Hayashizaki Y.
  CONSRTM   FANTOM Consortium; RIKEN Genome Exploration Research Group and
            Genome Science Group (Genome Network Project Core Group)
  TITLE     The transcriptional landscape of the mammalian genome
  JOURNAL   Science 309 (5740), 1559-1563 (2005)
   PUBMED   16141072
  REMARK    Erratum:[Science. 2006 Mar 24;311(5768):1713]
REFERENCE   5  (residues 1 to 1413)
  AUTHORS   Okazaki Y, Furuno M, Kasukawa T, Adachi J, Bono H, Kondo S, Nikaido
            I, Osato N, Saito R, Suzuki H, Yamanaka I, Kiyosawa H, Yagi K,
            Tomaru Y, Hasegawa Y, Nogami A, Schonbach C, Gojobori T, Baldarelli
            R, Hill DP, Bult C, Hume DA, Quackenbush J, Schriml LM, Kanapin A,
            Matsuda H, Batalov S, Beisel KW, Blake JA, Bradt D, Brusic V,
            Chothia C, Corbani LE, Cousins S, Dalla E, Dragani TA, Fletcher CF,
            Forrest A, Frazer KS, Gaasterland T, Gariboldi M, Gissi C, Godzik
            A, Gough J, Grimmond S, Gustincich S, Hirokawa N, Jackson IJ,
            Jarvis ED, Kanai A, Kawaji H, Kawasawa Y, Kedzierski RM, King BL,
            Konagaya A, Kurochkin IV, Lee Y, Lenhard B, Lyons PA, Maglott DR,
            Maltais L, Marchionni L, McKenzie L, Miki H, Nagashima T, Numata K,
            Okido T, Pavan WJ, Pertea G, Pesole G, Petrovsky N, Pillai R,
            Pontius JU, Qi D, Ramachandran S, Ravasi T, Reed JC, Reed DJ, Reid
            J, Ring BZ, Ringwald M, Sandelin A, Schneider C, Semple CA, Setou
            M, Shimada K, Sultana R, Takenaka Y, Taylor MS, Teasdale RD, Tomita
            M, Verardo R, Wagner L, Wahlestedt C, Wang Y, Watanabe Y, Wells C,
            Wilming LG, Wynshaw-Boris A, Yanagisawa M, Yang I, Yang L, Yuan Z,
            Zavolan M, Zhu Y, Zimmer A, Carninci P, Hayatsu N,
            Hirozane-Kishikawa T, Konno H, Nakamura M, Sakazume N, Sato K,
            Shiraki T, Waki K, Kawai J, Aizawa K, Arakawa T, Fukuda S, Hara A,
            Hashizume W, Imotani K, Ishii Y, Itoh M, Kagawa I, Miyazaki A,
            Sakai K, Sasaki D, Shibata K, Shinagawa A, Yasunishi A, Yoshino M,
            Waterston R, Lander ES, Rogers J, Birney E and Hayashizaki Y.
  CONSRTM   FANTOM Consortium; RIKEN Genome Exploration Research Group Phase I
            & II Team
  TITLE     Analysis of the mouse transcriptome based on functional annotation
            of 60,770 full-length cDNAs
  JOURNAL   Nature 420 (6915), 563-573 (2002)
   PUBMED   12466851
REFERENCE   6  (residues 1 to 1413)
  AUTHORS   Kawai J, Shinagawa A, Shibata K, Yoshino M, Itoh M, Ishii Y,
            Arakawa T, Hara A, Fukunishi Y, Konno H, Adachi J, Fukuda S, Aizawa
            K, Izawa M, Nishi K, Kiyosawa H, Kondo S, Yamanaka I, Saito T,
            Okazaki Y, Gojobori T, Bono H, Kasukawa T, Saito R, Kadota K,
            Matsuda H, Ashburner M, Batalov S, Casavant T, Fleischmann W,
            Gaasterland T, Gissi C, King B, Kochiwa H, Kuehl P, Lewis S, Matsuo
            Y, Nikaido I, Pesole G, Quackenbush J, Schriml LM, Staubli F,
            Suzuki R, Tomita M, Wagner L, Washio T, Sakai K, Okido T, Furuno M,
            Aono H, Baldarelli R, Barsh G, Blake J, Boffelli D, Bojunga N,
            Carninci P, de Bonaldo MF, Brownstein MJ, Bult C, Fletcher C,
            Fujita M, Gariboldi M, Gustincich S, Hill D, Hofmann M, Hume DA,
            Kamiya M, Lee NH, Lyons P, Marchionni L, Mashima J, Mazzarelli J,
            Mombaerts P, Nordone P, Ring B, Ringwald M, Rodriguez I, Sakamoto
            N, Sasaki H, Sato K, Schonbach C, Seya T, Shibata Y, Storch KF,
            Suzuki H, Toyo-oka K, Wang KH, Weitz C, Whittaker C, Wilming L,
            Wynshaw-Boris A, Yoshida K, Hasegawa Y, Kawaji H, Kohtsuki S and
            Hayashizaki Y.
  CONSRTM   RIKEN Genome Exploration Research Group Phase II Team and the
            FANTOM Consortium
  TITLE     Functional annotation of a full-length mouse cDNA collection
  JOURNAL   Nature 409 (6821), 685-690 (2001)
   PUBMED   11217851
REFERENCE   7  (residues 1 to 1413)
  AUTHORS   Shibata K, Itoh M, Aizawa K, Nagaoka S, Sasaki N, Carninci P, Konno
            H, Akiyama J, Nishi K, Kitsunai T, Tashiro H, Itoh M, Sumi N, Ishii
            Y, Nakamura S, Hazama M, Nishine T, Harada A, Yamamoto R, Matsumoto
            H, Sakaguchi S, Ikegami T, Kashiwagi K, Fujiwake S, Inoue K and
            Togawa Y.
  TITLE     RIKEN integrated sequence analysis (RISA) system--384-format
            sequencing pipeline with 384 multicapillary sequencer
  JOURNAL   Genome Res 10 (11), 1757-1771 (2000)
   PUBMED   11076861
REFERENCE   8  (residues 1 to 1413)
  AUTHORS   Carninci P, Shibata Y, Hayatsu N, Sugahara Y, Shibata K, Itoh M,
            Konno H, Okazaki Y, Muramatsu M and Hayashizaki Y.
  TITLE     Normalization and subtraction of cap-trapper-selected cDNAs to
            prepare full-length cDNA libraries for rapid discovery of new genes
  JOURNAL   Genome Res 10 (10), 1617-1630 (2000)
   PUBMED   11042159
REFERENCE   9  (residues 1 to 1413)
  AUTHORS   Carninci P and Hayashizaki Y.
  TITLE     High-efficiency full-length cDNA cloning
  JOURNAL   Methods Enzymol 303, 19-44 (1999)
   PUBMED   10349636
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL833780.6.
            
            On Jun 15, 2019 this sequence version replaced XP_006500577.1.
            
            ##Evidence-Data-START##
            CDS exon combination :: SRR14995047.530662.1 [ECO:0000331]
            RNAseq introns       :: mixed sample support SAMN00849374,
                                    SAMN00849376 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on conservation, expression,
                                         longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1413
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 62.63 cM"
     Protein         1..1413
                     /product="uncharacterized protein LOC668894"
                     /calculated_mol_wt=155694
     Region          15..>610
                     /region_name="Vinculin"
                     /note="Vinculin family; pfam01044"
                     /db_xref="CDD:460040"
     Region          <1224..1375
                     /region_name="Vinculin"
                     /note="Vinculin family; pfam01044"
                     /db_xref="CDD:460040"
     CDS             1..1413
                     /gene="Vinac1"
                     /gene_synonym="Gm14025"
                     /coded_by="NM_001370941.1:3838..8079"
                     /db_xref="CCDS:CCDS89554.1"
                     /db_xref="GeneID:668894"
                     /db_xref="MGI:MGI:3649276"
ORIGIN      
        1 mkmdsslgdd fgptiqnram eqiitpmtvq lchllisver kevqnkalas lqkvaeqlan
       61 aseefvhvas rlagdseekw lreemkpvae slilsgrnil rvaeklhlqp esqrhweelv
      121 ataqqvlvdt kkvlllddaa avrktrtaan wcltcveale eaedttslrt slddlaaalf
      181 rlggltarwa wdqhlgrarh rlgccvpall aaahghlrhp rdpqlvasrr rvfaltrqsl
      241 eelldalqpg vgvvgtgvls qngalarglc klrkvledpg pghllldapl aavvwhclrl
      301 aacsapqerm hlvsrcrqlm qlrpgvhslp rsspgtdcea lraatdalfr avragllrqi
      361 ldtftdtqsp letlvqaala tstirfrcds ealaetvqil ldafhnqakq mirvahlvwv
      421 ccpqqqtgrd leaavaglqr lvikvkelfs qspqtlgldw spatlqalle awaresehll
      481 scfdvvlnip eflsvsiqem tkhldlstia lrsgasrefs rsvaflrgra thivqvmsry
      541 vgqdpdpifr ngmrvvvqql aqssvtlgaa tegsraedsa qdtdvfltma khlihaaqqv
      601 regldgsnhp dilsplrvqv qrfdmtkgws yfilpspqhp taseikyqrv pglwksgpnt
      661 sllpveqlsy tvvpgtcihg wrfplpavsk gvttmenrnh qvvtlpctnt peqnstvdtv
      721 qetqageetl gpermtglqe vstlapsiid larkevhsan tgseellrvs fqqsqgtred
      781 rwglvaragd wyplcqqlfc hnletelpgs maafvelqqd lalmvqvaak sgpvnvdkkn
      841 pdlmghprll lelqdrsekt eihakqlldq vlssdglqep tlreenidng cllwavavqd
      901 lmqcmerfsr rqglfllplr qavknqqglq kglgqaaeis qrlqeaakls svlcgdaqvk
      961 geisflcrev hvltdallev ahilvsspkp cpslstrfel lclelslrak altdyltsin
     1021 aayehmfqdv iskssqnrie gmlstiqavq giiaggqese tvqkdllvsl esiltltkev
     1081 vrkvpvlqev qslhtldwlq wewaakvhha vtqlqalegs hmeawrllvq ylkprgeqak
     1141 pleedlvqpp phcnegtagt tsgvsvdsqg avpkdtpess vgtcadepat trtttadrsm
     1201 hqsgslslpp aqmdqpaped ssadsenrit qitqematev llmarslrks gqvltkdqli
     1261 asarkvsasg kdftrlihii akncidqrcs qellcmveqi qtmssqlsii ssvkasltrs
     1321 ksseellvdn aqrllqavsk tvsaveaacl rglrwpssdp eelevaafct qwkrkllqhr
     1381 lqeasnedcd elglrkrstr klpalaalvq eal
//
LOCUS       NP_080611                140 aa            linear   ROD 16-NOV-2023
DEFINITION  late cornified envelope 1H [Mus musculus].
ACCESSION   NP_080611
VERSION     NP_080611.1
DBSOURCE    REFSEQ: accession NM_026335.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 140)
  AUTHORS   Schwartz B, Levi H, Menon G, Maria R, Upcher A, Kotlovski Y,
            Oss-Ronen L and Cohen I.
  TITLE     ZNF750 Regulates Skin Barrier Function by Driving Cornified
            Envelope and Lipid Processing Pathways
  JOURNAL   J Invest Dermatol (2023) In press
   PUBMED   37660780
  REMARK    Publication Status: Available-Online prior to print
REFERENCE   2  (residues 1 to 140)
  AUTHORS   Abdallah BM, Ditzel N, Mahmood A, Isa A, Traustadottir GA,
            Schilling AF, Ruiz-Hidalgo MJ, Laborda J, Amling M and Kassem M.
  TITLE     DLK1 is a novel regulator of bone mass that mediates estrogen
            deficiency-induced bone loss in mice
  JOURNAL   J Bone Miner Res 26 (7), 1457-1471 (2011)
   PUBMED   21308776
REFERENCE   3  (residues 1 to 140)
  AUTHORS   Brown,S.J., Tilli,C.M., Jackson,B., Avilion,A.A., MacLeod,M.C.,
            Maltais,L.J., Lovering,R.C. and Byrne,C.
  TITLE     Rodent Lce gene clusters; new nomenclature, gene organization, and
            divergence of human and rodent genes
  JOURNAL   J Invest Dermatol 127 (7), 1782-1786 (2007)
   PUBMED   17410201
REFERENCE   4  (residues 1 to 140)
  AUTHORS   Jonker L, Kist R, Aw A, Wappler I and Peters H.
  TITLE     Pax9 is required for filiform papilla development and suppresses
            skin-specific differentiation of the mammalian tongue epithelium
  JOURNAL   Mech Dev 121 (11), 1313-1322 (2004)
   PUBMED   15454262
REFERENCE   5  (residues 1 to 140)
  AUTHORS   Marshall D, Hardman MJ, Nield KM and Byrne C.
  TITLE     Differentially expressed late constituents of the epidermal
            cornified envelope
  JOURNAL   Proc Natl Acad Sci U S A 98 (23), 13031-13036 (2001)
   PUBMED   11698679
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK010064.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK010064.1, BY709611.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849376
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 40.14 cM"
     Protein         1..140
                     /product="late cornified envelope 1H"
                     /note="small proline rich-like 9"
                     /calculated_mol_wt=13175
     CDS             1..140
                     /gene="Lce1h"
                     /gene_synonym="2310066F03Rik; Sprrl9"
                     /coded_by="NM_026335.2:78..500"
                     /db_xref="CCDS:CCDS17570.1"
                     /db_xref="GeneID:67718"
                     /db_xref="MGI:MGI:1914968"
ORIGIN      
        1 mscqqsqqqc qapakcppkc qtpkcppkcp pkcppkcppv ssccslgsgg ccgsssggcc
       61 gsssggccss ggccssgggg cclshhrphr slrrhrhssg ccssggnsgc cgssggssgc
      121 cgssgssgcc gssqqsggcc
//
LOCUS       NP_082904                135 aa            linear   ROD 16-NOV-2023
DEFINITION  late cornified envelope 1L [Mus musculus].
ACCESSION   NP_082904
VERSION     NP_082904.1
DBSOURCE    REFSEQ: accession NM_028628.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 135)
  AUTHORS   Schwartz B, Levi H, Menon G, Maria R, Upcher A, Kotlovski Y,
            Oss-Ronen L and Cohen I.
  TITLE     ZNF750 Regulates Skin Barrier Function by Driving Cornified
            Envelope and Lipid Processing Pathways
  JOURNAL   J Invest Dermatol (2023) In press
   PUBMED   37660780
  REMARK    Publication Status: Available-Online prior to print
REFERENCE   2  (residues 1 to 135)
  AUTHORS   Miyai M, Hamada M, Moriguchi T, Hiruma J, Kamitani-Kawamoto A,
            Watanabe H, Hara-Chikuma M, Takahashi K, Takahashi S and Kataoka K.
  TITLE     Transcription Factor MafB Coordinates Epidermal Keratinocyte
            Differentiation
  JOURNAL   J Invest Dermatol 136 (9), 1848-1857 (2016)
   PUBMED   27208706
  REMARK    Review article
REFERENCE   3  (residues 1 to 135)
  AUTHORS   Brown,S.J., Tilli,C.M., Jackson,B., Avilion,A.A., MacLeod,M.C.,
            Maltais,L.J., Lovering,R.C. and Byrne,C.
  TITLE     Rodent Lce gene clusters; new nomenclature, gene organization, and
            divergence of human and rodent genes
  JOURNAL   J Invest Dermatol 127 (7), 1782-1786 (2007)
   PUBMED   17410201
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK003585.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK003585.1, BY703841.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849376
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 40.14 cM"
     Protein         1..135
                     /product="late cornified envelope 1L"
                     /calculated_mol_wt=13079
     CDS             1..135
                     /gene="Lce1l"
                     /gene_synonym="1110008K04Rik"
                     /coded_by="NM_028628.2:70..477"
                     /db_xref="CCDS:CCDS38518.1"
                     /db_xref="GeneID:73730"
                     /db_xref="MGI:MGI:1920980"
ORIGIN      
        1 mscqqsqqqc qpppkctpkc ppkcqtpkcp pkcppkcppk cppvssccsl gsggccgsss
       61 ggccssggcc ssggccssgg ggcclshhrp hrslrrhrhs sgccssggss dccgssgccg
      121 ssgccggnqq sgdcc
//
LOCUS       NP_001025059             105 aa            linear   PRI 16-NOV-2023
DEFINITION  protein FAM24A precursor [Homo sapiens].
ACCESSION   NP_001025059 XP_058332
VERSION     NP_001025059.1
DBSOURCE    REFSEQ: accession NM_001029888.3
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC073585.8 and BX109949.1.
            
            On Jul 27, 2005 this sequence version replaced XP_058332.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5189667.282778.1, BX109949.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA1968968, SAMEA2148093
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000368894.2/ ENSP00000357889.1
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Homo sapiens"
                     /db_xref="taxon:9606"
                     /chromosome="10"
                     /map="10q26.13"
     Protein         1..105
                     /product="protein FAM24A precursor"
                     /note="protein FAM24A"
                     /calculated_mol_wt=7817
     sig_peptide     1..32
                     /note="/evidence=ECO:0000255; propagated from
                     UniProtKB/Swiss-Prot (A6NFZ4.1)"
                     /calculated_mol_wt=3459
     mat_peptide     33..105
                     /product="Protein FAM24A. /id=PRO_0000317244"
                     /note="propagated from UniProtKB/Swiss-Prot (A6NFZ4.1)"
                     /calculated_mol_wt=7817
     Region          33..105
                     /region_name="FAM24"
                     /note="FAM24 family; pfam15193"
                     /db_xref="CDD:464556"
     CDS             1..105
                     /gene="FAM24A"
                     /coded_by="NM_001029888.3:213..530"
                     /db_xref="CCDS:CCDS31304.1"
                     /db_xref="GeneID:118670"
                     /db_xref="HGNC:HGNC:23470"
ORIGIN      
        1 makmfdlrtk imigigssll vaamvllsvv fclyfkvaka lkaakdpdav avknhnpdkv
       61 cwatnsqaka ttmescpslq ccegcrmhas sdslppcccd inegl
//
LOCUS       NP_001342502             255 aa            linear   PRI 18-NOV-2023
DEFINITION  coiled-coil domain-containing 92B isoform 1 [Homo sapiens].
ACCESSION   NP_001342502
VERSION     NP_001342502.1
DBSOURCE    REFSEQ: accession NM_001355573.2
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC005696.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA1968968,
                              SAMEA2154665 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            MANE Ensembl match        :: ENST00000614400.2/ ENSP00000509343.1
            RefSeq Select criteria    :: based on manual assertion,
                                         conservation, longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Homo sapiens"
                     /db_xref="taxon:9606"
                     /chromosome="17"
                     /map="17p13.3"
     Protein         1..255
                     /product="coiled-coil domain-containing 92B isoform 1"
                     /calculated_mol_wt=28534
     Region          <6..>153
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          7..63
                     /region_name="CCDC92"
                     /note="Coiled-coil domain of unknown function; pfam14916"
                     /db_xref="CDD:464372"
     Region          149..255
                     /region_name="Disordered.
                     /evidence=ECO:0000256|SAM:MobiDB-lite"
                     /note="propagated from UniProtKB/Swiss-Prot
                     (A0A8I5KY20.1)"
     CDS             1..255
                     /gene="CCDC92B"
                     /coded_by="NM_001355573.2:266..1033"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /db_xref="CCDS:CCDS92222.1"
                     /db_xref="GeneID:101928991"
                     /db_xref="HGNC:HGNC:52279"
ORIGIN      
        1 mdtvslehqi qsvqrhisfl kkeqmallrd lhleilrlqk rcselthdle mreaqshqqe
       61 aasreleskc ralesqlear aaanaelrre vaqrealvsa lrcslrteer rfleelrrrs
      121 hratvlgtel qkhteaaayl scqlhaarqr lqaprpgpga taeprprrra lrarrppaah
      181 eaaakgpgrd waawdrgaga lddadpmpdp alflyarrpl rpsarsprqp ppqeppdrag
      241 pqpapsqpsa pgdpe
//
LOCUS       NP_001295395              86 aa            linear   ROD 19-NOV-2023
DEFINITION  ubiquinol-cytochrome c reductase complex assembly factor 5 isoform
            3 [Mus musculus].
ACCESSION   NP_001295395
VERSION     NP_001295395.1
DBSOURCE    REFSEQ: accession NM_001308466.2
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 86)
  AUTHORS   Liang C, Zhang S, Robinson D, Ploeg MV, Wilson R, Nah J, Taylor D,
            Beh S, Lim R, Sun L, Muoio DM, Stroud DA and Ho L.
  TITLE     Mitochondrial microproteins link metabolic cues to respiratory
            chain biogenesis
  JOURNAL   Cell Rep 40 (7), 111204 (2022)
   PUBMED   35977508
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC154446.2.
            
            Transcript Variant: This variant (3) contains two alternate
            internal exons, resulting in a distinct 3' coding region and a
            different 3' UTR, compared to variant 1. The encoded isoform (3)
            has a shorter and distinct C-terminus, compared to isoform 1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CX238554.1, ERR3363658.1102089.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164136 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="14"
                     /map="14"
     Protein         1..86
                     /product="ubiquinol-cytochrome c reductase complex
                     assembly factor 5 isoform 3"
                     /note="small nucleolar RNA host gene 8; small integral
                     membrane protein 4"
                     /calculated_mol_wt=10338
     Region          4..68
                     /region_name="UPF0640"
                     /note="Uncharacterized protein family UPF0640; pfam15114"
                     /db_xref="CDD:464511"
     CDS             1..86
                     /gene="Uqcc5"
                     /gene_synonym="2010107H07Rik; Gm41122; Smim4"
                     /coded_by="NM_001308466.2:155..415"
                     /note="isoform 3 is encoded by transcript variant 3"
                     /db_xref="CCDS:CCDS84106.1"
                     /db_xref="GeneID:66487"
                     /db_xref="MGI:MGI:1913737"
ORIGIN      
        1 mfsraqvrra lqrvpgkqrf giyrflpfff vlggamewim ikvrvgqetf ydvyrrkase
       61 rqyqrrledt setnlhklik iptpwq
//
LOCUS       NP_001162459             339 aa            linear   PRI 20-NOV-2023
DEFINITION  STEAP1 protein [Papio anubis].
ACCESSION   NP_001162459
VERSION     NP_001162459.1
DBSOURCE    REFSEQ: accession NM_001168988.1
KEYWORDS    RefSeq.
SOURCE      Papio anubis (olive baboon)
  ORGANISM  Papio anubis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Cercopithecidae; Cercopithecinae; Papio.
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from DP000509.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN02045697,
                              SAMN02045698 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Papio anubis"
                     /db_xref="taxon:9555"
                     /chromosome="4"
                     /map="4"
     Protein         1..339
                     /product="STEAP1 protein"
                     /calculated_mol_wt=39701
     Region          118..265
                     /region_name="Ferric_reduct"
                     /note="Ferric reductase like transmembrane component;
                     pfam01794"
                     /db_xref="CDD:426438"
     CDS             1..339
                     /gene="STEAP1"
                     /coded_by="NM_001168988.1:1..1020"
                     /db_xref="GeneID:100137457"
ORIGIN      
        1 mesrkditne eelwkmkprr nleeddylhk dtgetsmlkr pvllhlhqta hadefdcpse
       61 lqhtqelfpq whlpikiaai iasltflytl lrevihplat shqqyfykip ilvinkvlpm
      121 vsitllalvy lpgviaaivq lhngtkykkf phwldkwmlt rkqfgllsff favlhaiysl
      181 sypmrrsyry kllnwayqqv qqnkedawie hdvwrmeiyv slgivglail allavtsips
      241 vsdsltwref hyiqsklgiv slllatihal ifawnkwidi kqfvwytppt fmiavflpvv
      301 vlilksilfl pclrkkilki rhgwedvtki nkmeissql
//
LOCUS       NP_001182525              66 aa            linear   ROD 20-NOV-2023
DEFINITION  small leucine-rich protein 1 [Mus musculus].
ACCESSION   NP_001182525 XP_905921 XP_924455
VERSION     NP_001182525.1
DBSOURCE    REFSEQ: accession NM_001195596.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 66)
  AUTHORS   van Zwol W, Rimbert A, Wolters JC, Smit M, Bloks VW, Kloosterhuis
            NJ, Huijkman NCA, Koster MH, Tharehalli U, de Neck SM, Bournez C,
            Fuh MM, Kuipers J, Rajan S, de Bruin A, Ginsberg HN, van Westen
            GJP, Hussain MM, Scheja L, Heeren J, Zimmerman P, van de Sluis B
            and Kuivenhoven JA.
  TITLE     Loss of hepatic SMLR1 causes hepatosteatosis and protects against
            atherosclerosis due to decreased hepatic VLDL secretion
  JOURNAL   Hepatology 78 (5), 1418-1432 (2023)
   PUBMED   36053190
  REMARK    GeneRIF: Loss of hepatic SMLR1 causes hepatosteatosis and protects
            against atherosclerosis due to decreased hepatic VLDL secretion.
REFERENCE   2  (residues 1 to 66)
  AUTHORS   Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, Magen
            A, Canidio E, Pagani M, Peluso I, Lin-Marq N, Koch M, Bilio M,
            Cantiello I, Verde R, De Masi C, Bianchi SA, Cicchini J, Perroud E,
            Mehmeti S, Dagand E, Schrinner S, Nurnberger A, Schmidt K, Metz K,
            Zwingmann C, Brieske N, Springer C, Hernandez AM, Herzog S, Grabbe
            F, Sieverding C, Fischer B, Schrader K, Brockmeyer M, Dettmer S,
            Helbig C, Alunni V, Battaini MA, Mura C, Henrichsen CN,
            Garcia-Lopez R, Echevarria D, Puelles E, Garcia-Calero E, Kruse S,
            Uhr M, Kauck C, Feng G, Milyaev N, Ong CK, Kumar L, Lam M, Semple
            CA, Gyenesei A, Mundlos S, Radelof U, Lehrach H, Sarmientos P,
            Reymond A, Davidson DR, Dolle P, Antonarakis SE, Yaspo ML, Martinez
            S, Baldock RA, Eichele G and Ballabio A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC153547.3 and AK008073.1.
            
            On or before Sep 19, 2010 this sequence version replaced
            XP_924455.1, XP_905921.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BY034367.1, AK008073.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164134 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..66
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 12.26 cM"
     Protein         1..66
                     /product="small leucine-rich protein 1"
                     /calculated_mol_wt=7367
     CDS             1..66
                     /gene="Smlr1"
                     /gene_synonym="2010003K15Rik"
                     /coded_by="NM_001195596.1:186..386"
                     /db_xref="CCDS:CCDS56698.1"
                     /db_xref="GeneID:100504474"
                     /db_xref="MGI:MGI:1922856"
ORIGIN      
        1 mssvlaiflq elpgpvlvlg iflpvtllll lllayfrikl maveeelaht sdrqnkfgss
       61 lrkrmr
//
LOCUS       NP_001382150             241 aa            linear   PRI 22-NOV-2023
DEFINITION  coiled-coil domain-containing protein 194 isoform 1 precursor [Homo
            sapiens].
ACCESSION   NP_001382150
VERSION     NP_001382150.1
DBSOURCE    REFSEQ: accession NM_001395221.1
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC010319.10.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMEA1968968, SAMEA2142348
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Homo sapiens"
                     /db_xref="taxon:9606"
                     /chromosome="19"
                     /map="19p13.11"
     Protein         1..241
                     /product="coiled-coil domain-containing protein 194
                     isoform 1 precursor"
                     /note="coiled-coil domain-containing protein 194"
                     /calculated_mol_wt=21679
     sig_peptide     1..42
                     /note="/evidence=ECO:0000255; propagated from
                     UniProtKB/Swiss-Prot (A0A1B0GVG4.1)"
                     /calculated_mol_wt=4078
     mat_peptide     43..234
                     /product="Coiled-coil domain-containing protein 194.
                     /evidence=ECO:0000255. /id=PRO_0000441407"
                     /note="propagated from UniProtKB/Swiss-Prot
                     (A0A1B0GVG4.1)"
                     /calculated_mol_wt=20894
     Region          44..67
                     /region_name="Disordered.
                     /evidence=ECO:0000256|SAM:MobiDB-lite"
                     /note="propagated from UniProtKB/Swiss-Prot
                     (A0A1B0GVG4.1)"
     Region          187..234
                     /region_name="Disordered.
                     /evidence=ECO:0000256|SAM:MobiDB-lite"
                     /note="propagated from UniProtKB/Swiss-Prot
                     (A0A1B0GVG4.1)"
     CDS             1..241
                     /gene="CCDC194"
                     /coded_by="NM_001395221.1:39..764"
                     /note="isoform 1 precursor is encoded by transcript
                     variant 1"
                     /db_xref="GeneID:110806280"
                     /db_xref="HGNC:HGNC:53438"
ORIGIN      
        1 maepgpepgr awrvlalcgv avflaaaaag galvawnlaa saargprcpe pganatappg
       61 dpppgvddlr rrlaeaaere ealarqldqa esirheleka lkacegrqsr lqtqlttlki
      121 emdeakaqgt qmgaengalt ealarweaaa testrrldea lrragvaeae geacaareaa
      181 lrerlnvlea emspqrrvpr prprsgsrpr psprsrsrsg psggcrrpar rargltenlv
      241 d
//
LOCUS       NP_062311               1004 aa            linear   ROD 22-NOV-2023
DEFINITION  condensin complex subunit 3 [Mus musculus].
ACCESSION   NP_062311 XP_485604
VERSION     NP_062311.1
DBSOURCE    REFSEQ: accession NM_019438.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 1004)
  AUTHORS   Hou J, Huang P, Xu M, Wang H, Shao Y, Weng X, Liu Y, Chang H, Zhang
            L and Cui H.
  TITLE     Nonstructural maintenance of chromatin condensin I complex subunit
            G promotes the progression of glioblastoma by facilitating Poly
            (ADP-ribose) polymerase 1-mediated E2F1 transactivation
  JOURNAL   Neuro Oncol 25 (11), 2015-2027 (2023)
   PUBMED   37422706
  REMARK    GeneRIF: Nonstructural maintenance of chromatin condensin I complex
            subunit G promotes the progression of glioblastoma by facilitating
            Poly (ADP-ribose) polymerase 1-mediated E2F1 transactivation.
REFERENCE   2  (residues 1 to 1004)
  AUTHORS   Zhang R, Ai J, Wang J, Sun C, Lu H, He A, Li M, Liao Y, Lei J, Zhou
            F, Wu L and Liao W.
  TITLE     NCAPG promotes the proliferation of hepatocellular carcinoma
            through the CKII-dependent regulation of PTEN
  JOURNAL   J Transl Med 20 (1), 325 (2022)
   PUBMED   35864529
  REMARK    GeneRIF: NCAPG promotes the proliferation of hepatocellular
            carcinoma through the CKII-dependent regulation of PTEN.
            Publication Status: Online-Only
REFERENCE   3  (residues 1 to 1004)
  AUTHORS   Bedogni F and Hevner RF.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   4  (residues 1 to 1004)
  AUTHORS   Ulmke PA, Sakib MS, Ditte P, Sokpor G, Kerimoglu C, Pham L, Xie Y,
            Mao X, Rosenbusch J, Teichmann U, Nguyen HP, Fischer A, Eichele G,
            Staiger JF and Tuoc T.
  TITLE     Molecular Profiling Reveals Involvement of ESCO2 in Intermediate
            Progenitor Cell Maintenance in the Developing Mouse Cortex
  JOURNAL   Stem Cell Reports 16 (4), 968-984 (2021)
   PUBMED   33798452
REFERENCE   5  (residues 1 to 1004)
  AUTHORS   Simonson L, Vold S, Mowers C, Massey RJ, Ong IM, Longley BJ and
            Chang H.
  TITLE     Keratin 13 deficiency causes white sponge nevus in mice
  JOURNAL   Dev Biol 468 (1-2), 146-153 (2020)
   PUBMED   32758484
REFERENCE   6  (residues 1 to 1004)
  AUTHORS   Oeschger FM, Wang WZ, Lee S, Garcia-Moreno F, Goffinet AM, Arbones
            ML, Rakic S and Molnar Z.
  TITLE     Gene expression analysis of the embryonic subplate
  JOURNAL   Cereb Cortex 22 (6), 1343-1359 (2012)
   PUBMED   21862448
REFERENCE   7  (residues 1 to 1004)
  AUTHORS   Lee J, Ogushi S, Saitou M and Hirano T.
  TITLE     Condensins I and II are essential for construction of bivalent
            chromosomes in mouse oocytes
  JOURNAL   Mol Biol Cell 22 (18), 3465-3477 (2011)
   PUBMED   21795393
REFERENCE   8  (residues 1 to 1004)
  AUTHORS   Onn I, Aono N, Hirano M and Hirano T.
  TITLE     Reconstitution and subunit geometry of human condensin complexes
  JOURNAL   EMBO J 26 (4), 1024-1034 (2007)
   PUBMED   17268547
REFERENCE   9  (residues 1 to 1004)
  AUTHORS   Stryke D, Kawamoto M, Huang CC, Johns SJ, King LA, Harper CA, Meng
            EC, Lee RE, Yee A, L'Italien L, Chuang PT, Young SG, Skarnes WC,
            Babbitt PC and Ferrin TE.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   10 (residues 1 to 1004)
  AUTHORS   Carrier A, Nguyen C, Victorero G, Granjeaud S, Rocha D, Bernard K,
            Miazek A, Ferrier P, Malissen M, Naquet P, Malissen B and Jordan
            BR.
  TITLE     Differential gene expression in CD3epsilon- and RAG1-deficient
            thymuses: definition of a set of genes potentially involved in
            thymocyte maturation
  JOURNAL   Immunogenetics 50 (5-6), 255-270 (1999)
   PUBMED   10630289
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC093341.5.
            
            On Mar 2, 2008 this sequence version replaced XP_485604.3.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR7652917.619610.1,
                                           SRR9219380.13500.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849383, SAMN00849384
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 25.23 cM"
     Protein         1..1004
                     /product="condensin complex subunit 3"
                     /note="on-SMC condensin I complex, subunit G; chromosome
                     condensation protein G"
                     /calculated_mol_wt=112738
     Region          9..856
                     /region_name="YCG1"
                     /note="Chromosome condensation complex Condensin, subunit
                     G [Chromatin structure and dynamics / Cell division and
                     chromosome partitioning]; COG5218"
                     /db_xref="CDD:227543"
     Region          212..234
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          557..857
                     /region_name="Cnd3"
                     /note="Nuclear condensing complex subunits, C-term domain;
                     pfam12719"
                     /db_xref="CDD:463678"
     CDS             1..1004
                     /gene="Ncapg"
                     /gene_synonym="5730507H05Rik; Hcapg; MFT.M05.13"
                     /coded_by="NM_019438.2:103..3117"
                     /db_xref="CCDS:CCDS51498.1"
                     /db_xref="GeneID:54392"
                     /db_xref="MGI:MGI:1930197"
ORIGIN      
        1 maaqkkrlsv keafqlaqqp hqnqaklvva lsrtygamdd ktafqeefih ylkyamvvyk
       61 repavervmd ftakfvtsfh qsdeeeeeee ndggilnylf tfllqshean ssavrfrvcq
      121 ltnkllgnmp enaqidddlf dkineamlir lkdkipnvri qavlalsrlq dpkdddcpvv
      181 dayvnviend snpevrravl sciapsaktl skivgrtkdi kdtvrklayq vlaekvhmra
      241 msiaqrvlll qqglndrsda vkqavqkhll qgwlrftegn ileflhrldv enssdvavsv
      301 lhslfsmtpl selvgicknd dgrklipvet ltpeialywc tlceylrskg degeefleqi
      361 lpepavyaey llsyiqgfpv vneeqkgdft figdlmkref igqqlilimk sldtseeggr
      421 krllailqet lilpttpisl vsliverllh iirddneriq ivteiiseir apivnvvvdp
      481 sdtrkkelkm aeikvkliea kealenciav qdfdqasklk eeikiledak inllketeql
      541 eikevhtekn daetlqkclv lcyellkqms tstgitatmn giieslilpg iisvhpivrn
      601 lavlclgccg lqnrdfaskh fmlflqvlqi ddvtikisal kaiidqlmmf giepfktqkv
      661 kgvqcegeei nchdkqeend agetdpaksv lkllsdflds evselrtgaa eglaklmfsg
      721 llvssrilsr lillwynpvt eedvrlrhcl gvffpmfaya nrtnqecfee afiptvqtla
      781 napvssplae vdvtnvvell vdltrpsrln pkaknsqdyq altvhdnlai kicneiltsp
      841 cspenrvytk alslvelssn vtkdllllld eilehvtdrt clralekiks qlgkggkesd
      901 pgvvtqdvnt ttavlqnene ymtpvrdgkg tqtskstqgk skrgcrkapv ssktnrrrqi
      961 agpdsesdhe ppsemkmrlp rraktaalqk sklnlaefln edts
//
LOCUS       NP_001382151             234 aa            linear   PRI 22-NOV-2023
DEFINITION  coiled-coil domain-containing protein 194 isoform 2 precursor [Homo
            sapiens].
ACCESSION   NP_001382151
VERSION     NP_001382151.1
DBSOURCE    REFSEQ: accession NM_001395222.1
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC010319.10.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR14038192.1653125.1,
                                           SRR14038194.2564754.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA1968968,
                                           SAMEA2142348 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000636079.2/ ENSP00000490504.1
            RefSeq Select criteria :: based on manual assertion, conservation,
                                      expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Homo sapiens"
                     /db_xref="taxon:9606"
                     /chromosome="19"
                     /map="19p13.11"
     Protein         1..234
                     /product="coiled-coil domain-containing protein 194
                     isoform 2 precursor"
                     /note="coiled-coil domain-containing protein 194"
                     /calculated_mol_wt=20894
     sig_peptide     1..42
                     /note="/evidence=ECO:0000255; propagated from
                     UniProtKB/Swiss-Prot (A0A1B0GVG4.1)"
                     /calculated_mol_wt=4078
     mat_peptide     43..234
                     /product="Coiled-coil domain-containing protein 194.
                     /evidence=ECO:0000255. /id=PRO_0000441407"
                     /note="propagated from UniProtKB/Swiss-Prot
                     (A0A1B0GVG4.1)"
                     /calculated_mol_wt=20894
     Region          44..67
                     /region_name="Disordered.
                     /evidence=ECO:0000256|SAM:MobiDB-lite"
                     /note="propagated from UniProtKB/Swiss-Prot
                     (A0A1B0GVG4.1)"
     Region          187..234
                     /region_name="Disordered.
                     /evidence=ECO:0000256|SAM:MobiDB-lite"
                     /note="propagated from UniProtKB/Swiss-Prot
                     (A0A1B0GVG4.1)"
     CDS             1..234
                     /gene="CCDC194"
                     /coded_by="NM_001395222.1:39..743"
                     /note="isoform 2 precursor is encoded by transcript
                     variant 2"
                     /db_xref="CCDS:CCDS92556.1"
                     /db_xref="GeneID:110806280"
                     /db_xref="HGNC:HGNC:53438"
ORIGIN      
        1 maepgpepgr awrvlalcgv avflaaaaag galvawnlaa saargprcpe pganatappg
       61 dpppgvddlr rrlaeaaere ealarqldqa esirheleka lkacegrqsr lqtqlttlki
      121 emdeakaqgt qmgaengalt ealarweaaa testrrldea lrragvaeae geacaareaa
      181 lrerlnvlea emspqrrvpr prprsgsrpr psprsrsrsg psggcrrpar rarg
//
LOCUS       NP_001382940             334 aa            linear   PRI 22-NOV-2023
DEFINITION  stabilizer of axonemal microtubules 3 [Homo sapiens].
ACCESSION   NP_001382940
VERSION     NP_001382940.1
DBSOURCE    REFSEQ: accession NM_001396011.1
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC008687.5.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA1968968,
                              SAMEA2148093 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000637680.2/ ENSP00000489727.1
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Homo sapiens"
                     /db_xref="taxon:9606"
                     /chromosome="19"
                     /map="19q13.33"
     Protein         1..334
                     /product="stabilizer of axonemal microtubules 3"
                     /note="CTB-60B18.10"
                     /calculated_mol_wt=37004
     Region          81..105
                     /region_name="Disordered.
                     /evidence=ECO:0000256|SAM:MobiDB-lite"
                     /note="propagated from UniProtKB/Swiss-Prot
                     (A0A1B0GTJ6.1)"
     Region          128..153
                     /region_name="Disordered.
                     /evidence=ECO:0000256|SAM:MobiDB-lite"
                     /note="propagated from UniProtKB/Swiss-Prot
                     (A0A1B0GTJ6.1)"
     Region          233..260
                     /region_name="Disordered.
                     /evidence=ECO:0000256|SAM:MobiDB-lite"
                     /note="propagated from UniProtKB/Swiss-Prot
                     (A0A1B0GTJ6.1)"
     CDS             1..334
                     /gene="SAXO3"
                     /coded_by="NM_001396011.1:35..1039"
                     /db_xref="CCDS:CCDS92661.1"
                     /db_xref="GeneID:101059948"
                     /db_xref="HGNC:HGNC:56771"
ORIGIN      
        1 masgtlapgc risatevpgs rpnchltssy fshriippip ftpptvqstv adplpqvakq
       61 dshnwafdev lsrwettsgs ayvpkthggp caqprapepa dptrtvgikd lgeklrhrgw
      121 rlplttkyqs setraqytgs psgdprapey fgpqppqlad hhrggpsqal iawtknpels
      181 grpftvsdrg vldrrqlylt tsardfrfyp ktelsgyprk dsltywsfee tpqvwshgpq
      241 rppcprssrp prpprvrvpr vspvtsamph rgalslaqes yspllhplrr ldrfcpleap
      301 wggphwkplr giysvpkays tenssygslk palv
//
LOCUS       NP_064399                320 aa            linear   ROD 23-NOV-2023
DEFINITION  melanoma antigen family A, 1 [Mus musculus].
ACCESSION   NP_064399 XP_001006950
VERSION     NP_064399.1
DBSOURCE    REFSEQ: accession NM_020015.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 320)
  AUTHORS   Fon Tacer K, Montoya MC, Oatley MJ, Lord T, Oatley JM, Klein J,
            Ravichandran R, Tillman H, Kim M, Connelly JP, Pruett-Miller SM,
            Bookout AL, Binshtock E, Kaminski MM and Potts PR.
  TITLE     MAGE cancer-testis antigens protect the mammalian germline under
            environmental stress
  JOURNAL   Sci Adv 5 (5), eaav4832 (2019)
   PUBMED   31149633
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 320)
  AUTHORS   Gao X, Nan Y, Yuan Y, Gong X, Sun Y, Zhou H, Zong Y, Zhang L and Yu
            M.
  TITLE     Gas-filled ultrasound microbubbles enhance the immunoactivity of
            the HSP70-MAGEA1 fusion protein against MAGEA1-expressing tumours
  JOURNAL   Mol Med Rep 18 (1), 315-321 (2018)
   PUBMED   29749485
  REMARK    GeneRIF: HSP70MAGEA1 delivered via microbubbles clearly inhibited
            and delayed the growth of MAGEA1expressing B16 melanomas in mice
            and improved the survival times of these animals compared with the
            fusion protein alone.
REFERENCE   3  (residues 1 to 320)
  AUTHORS   Jiang J, Xie D, Zhang W, Xiao G and Wen J.
  TITLE     Fusion of Hsp70 to Mage-a1 enhances the potency of vaccine-specific
            immune responses
  JOURNAL   J Transl Med 11, 300 (2013)
   PUBMED   24314011
  REMARK    GeneRIF: results indicate that the fusion of Hsp70 to Mage-a1 can
            enhance immune responses and anti-tumor effects against
            Mage-a1-expressing tumors
            Publication Status: Online-Only
REFERENCE   4  (residues 1 to 320)
  AUTHORS   Chomez P, De Backer O, Bertrand M, De Plaen E, Boon T and Lucas S.
  TITLE     An overview of the MAGE gene family with the identification of all
            human members of the family
  JOURNAL   Cancer Res 61 (14), 5544-5551 (2001)
   PUBMED   11454705
REFERENCE   5  (residues 1 to 320)
  AUTHORS   De Plaen E, De Backer O, Arnaud D, Bonjean B, Chomez P, Martelange
            V, Avner P, Baldacci P, Babinet C, Hwang SY, Knowles B and Boon T.
  TITLE     A new family of mouse genes homologous to the human MAGE genes
  JOURNAL   Genomics 55 (2), 176-184 (1999)
   PUBMED   9933564
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC116904.1 and CJ223782.1.
            
            On May 4, 2006 this sequence version replaced XP_001006950.1.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Mus musculus"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 72.38 cM"
     Protein         1..320
                     /product="melanoma antigen family A, 1"
                     /note="melanoma antigen, family A, 1"
                     /calculated_mol_wt=35965
     Region          <43..78
                     /region_name="MAGE_N"
                     /note="Melanoma associated antigen family N terminal;
                     pfam12440"
                     /db_xref="CDD:463582"
     Region          134..271
                     /region_name="MAGE"
                     /note="MAGE homology domain; pfam01454"
                     /db_xref="CDD:426270"
     CDS             1..320
                     /gene="Magea1"
                     /gene_synonym="Mage-a1"
                     /coded_by="NM_020015.2:63..1025"
                     /db_xref="CCDS:CCDS30493.1"
                     /db_xref="GeneID:17137"
                     /db_xref="MGI:MGI:1333834"
ORIGIN      
        1 madsrntqyc slqesaqaqq eldndqetme tseeeedttt snkvygsgip sppqspqray
       61 spcvalasip dspseeasik gsggledply llhnaqntkv ydlvdflvln yqmkafttka
      121 emlesigrey eeyyplifse aseclkmvfg ldmvevdpsv hsyilvtalg itydgmmtdv
      181 qgmpktgili avlsvifmkg nyvseeiiwe mvnniglcgg rdpyihkdpr kliseefvqe
      241 gclkyrqvpn sdppsygflw gprafaetsk mkvlqffasi nkthpraype kyaealrdei
      301 yrtkawilnr csnfsdlltf
//
LOCUS       NP_064403                325 aa            linear   ROD 23-NOV-2023
DEFINITION  melanoma antigen family A, 6 [Mus musculus].
ACCESSION   NP_064403
VERSION     NP_064403.1
DBSOURCE    REFSEQ: accession NM_020019.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 325)
  AUTHORS   Aghamajidi A, Ousati Ashtiani Z, Mohsenzadegan M, Tajik N, Ghafoori
            Yazdi M, Sharifi L and Nowroozi MR.
  TITLE     Molecular Characteristics of Bladder Tumor: Increased Gene
            Expression of MAGE-A6 and MAGE-A11 with Decreased MicroRNA-34a and
            MicroRNA-125b
  JOURNAL   Iran J Allergy Asthma Immunol 21 (5), 561-573 (2022)
   PUBMED   36341564
  REMARK    GeneRIF: Molecular Characteristics of Bladder Tumor: Increased Gene
            Expression of MAGE-A6 and MAGE-A11 with Decreased MicroRNA-34a and
            MicroRNA-125b.
            Publication Status: Online-Only
REFERENCE   2  (residues 1 to 325)
  AUTHORS   Fon Tacer K, Montoya MC, Oatley MJ, Lord T, Oatley JM, Klein J,
            Ravichandran R, Tillman H, Kim M, Connelly JP, Pruett-Miller SM,
            Bookout AL, Binshtock E, Kaminski MM and Potts PR.
  TITLE     MAGE cancer-testis antigens protect the mammalian germline under
            environmental stress
  JOURNAL   Sci Adv 5 (5), eaav4832 (2019)
   PUBMED   31149633
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 325)
  AUTHORS   Gordeeva O, Gordeev A and Khaydukov S.
  TITLE     Expression dynamics of Mage family genes during self-renewal and
            differentiation of mouse pluripotent stem and teratocarcinoma cells
  JOURNAL   Oncotarget 10 (35), 3248-3266 (2019)
   PUBMED   31143371
  REMARK    Publication Status: Online-Only
REFERENCE   4  (residues 1 to 325)
  AUTHORS   Chomez P, De Backer O, Bertrand M, De Plaen E, Boon T and Lucas S.
  TITLE     An overview of the MAGE gene family with the identification of all
            human members of the family
  JOURNAL   Cancer Res 61 (14), 5544-5551 (2001)
   PUBMED   11454705
REFERENCE   5  (residues 1 to 325)
  AUTHORS   De Plaen E, De Backer O, Arnaud D, Bonjean B, Chomez P, Martelange
            V, Avner P, Baldacci P, Babinet C, Hwang SY, Knowles B and Boon T.
  TITLE     A new family of mouse genes homologous to the human MAGE genes
  JOURNAL   Genomics 55 (2), 176-184 (1999)
   PUBMED   9933564
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC109339.2 and BX294161.8.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC109339.2 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN01164134
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Mus musculus"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 72.38 cM"
     Protein         1..325
                     /product="melanoma antigen family A, 6"
                     /note="melanoma antigen, family A, 6"
                     /calculated_mol_wt=36509
     Region          <43..78
                     /region_name="MAGE_N"
                     /note="Melanoma associated antigen family N terminal;
                     pfam12440"
                     /db_xref="CDD:463582"
     Region          134..271
                     /region_name="MAGE"
                     /note="MAGE homology domain; pfam01454"
                     /db_xref="CDD:426270"
     CDS             1..325
                     /gene="Magea6"
                     /gene_synonym="Mage-a6"
                     /coded_by="NM_020019.3:155..1132"
                     /db_xref="CCDS:CCDS30488.1"
                     /db_xref="GeneID:17142"
                     /db_xref="MGI:MGI:1333837"
ORIGIN      
        1 madfhntqyc nleesaqaqq esdndqetme tseeeedttt snkvygsaip sppqspqray
       61 spcvalasip dspseeasik gsggledply llhsaqntkv ydlvdflvln yemkafptka
      121 emlesigrey eeyfpvifse aseclkmvfg ldmvevdpsv hsymlvtalg itydgmmtdv
      181 qgmpktgili avlsvifmkg nyvseeviwe mlnniglcgg rdpyihkdpr kliseefvqe
      241 gyleyrqvpn sdppiygflw gpralaetsk mkvlqffasi nkthpraype kyaealrdei
      301 ertkawilsr csnfsdhssv lpfpf
//
LOCUS       NP_064400                320 aa            linear   ROD 23-NOV-2023
DEFINITION  melanoma antigen family A, 2 [Mus musculus].
ACCESSION   NP_064400
VERSION     NP_064400.1
DBSOURCE    REFSEQ: accession NM_020016.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 320)
  AUTHORS   Fon Tacer K, Montoya MC, Oatley MJ, Lord T, Oatley JM, Klein J,
            Ravichandran R, Tillman H, Kim M, Connelly JP, Pruett-Miller SM,
            Bookout AL, Binshtock E, Kaminski MM and Potts PR.
  TITLE     MAGE cancer-testis antigens protect the mammalian germline under
            environmental stress
  JOURNAL   Sci Adv 5 (5), eaav4832 (2019)
   PUBMED   31149633
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 320)
  AUTHORS   Gordeeva O, Gordeev A and Khaydukov S.
  TITLE     Expression dynamics of Mage family genes during self-renewal and
            differentiation of mouse pluripotent stem and teratocarcinoma cells
  JOURNAL   Oncotarget 10 (35), 3248-3266 (2019)
   PUBMED   31143371
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 320)
  AUTHORS   Chomez P, De Backer O, Bertrand M, De Plaen E, Boon T and Lucas S.
  TITLE     An overview of the MAGE gene family with the identification of all
            human members of the family
  JOURNAL   Cancer Res 61 (14), 5544-5551 (2001)
   PUBMED   11454705
REFERENCE   4  (residues 1 to 320)
  AUTHORS   Van Pel A, De Plaen E, Duffour MT, Warnier G, Uyttenhove C,
            Perricaudet M and Boon T.
  TITLE     Induction of cytolytic T lymphocytes by immunization of mice with
            an adenovirus containing a mouse homolog of the human MAGE-A genes
  JOURNAL   Cancer Immunol Immunother 49 (11), 593-602 (2001)
   PUBMED   11225990
REFERENCE   5  (residues 1 to 320)
  AUTHORS   De Plaen E, De Backer O, Arnaud D, Bonjean B, Chomez P, Martelange
            V, Avner P, Baldacci P, Babinet C, Hwang SY, Knowles B and Boon T.
  TITLE     A new family of mouse genes homologous to the human MAGE genes
  JOURNAL   Genomics 55 (2), 176-184 (1999)
   PUBMED   9933564
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AJ005526.1.
            
            ##Evidence-Data-START##
            CDS exon combination :: BC106842.2, AA562292.1 [ECO:0000331]
            RNAseq introns       :: single sample supports all introns
                                    SAMN00849384, SAMN01164134 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Mus musculus"
                     /strain="129"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 72.38 cM"
     Protein         1..320
                     /product="melanoma antigen family A, 2"
                     /note="melanoma antigen, family A, 2"
                     /calculated_mol_wt=35795
     Region          <43..78
                     /region_name="MAGE_N"
                     /note="Melanoma associated antigen family N terminal;
                     pfam12440"
                     /db_xref="CDD:463582"
     Region          134..271
                     /region_name="MAGE"
                     /note="MAGE homology domain; pfam01454"
                     /db_xref="CDD:426270"
     CDS             1..320
                     /gene="Magea2"
                     /gene_synonym="Mage-a2"
                     /coded_by="NM_020016.1:300..1262"
                     /db_xref="CCDS:CCDS30491.1"
                     /db_xref="GeneID:17138"
                     /db_xref="MGI:MGI:1333793"
ORIGIN      
        1 madshntqyc slqesaqaqq eldndqetme tseeeedttt snkvygsgip sppqspqray
       61 spcvalasip dspseeasik gsggledply llhnaqntkv ydlvdflvln yqmkafttka
      121 emlesigrey eeyyplifse aseclkmvfg ldmvevdpsv hsyilvtalg itydgmmtdv
      181 lgmpktgili avlsvifmkg nyvseeiiwe mvnniglcgg rdpyihkdpr kliseefvqe
      241 gclkyrqvpn sdppsygflw gprafaetsk mkvlqffasi nkthpraype kyaealqdei
      301 drtkawilnr csnssdlltf
//
LOCUS       NP_001078975             325 aa            linear   ROD 23-NOV-2023
DEFINITION  melanoma-associated antigen 10 [Mus musculus].
ACCESSION   NP_001078975 XP_001474676 XP_913729
VERSION     NP_001078975.1
DBSOURCE    REFSEQ: accession NM_001085506.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 325)
  AUTHORS   Fon Tacer K, Montoya MC, Oatley MJ, Lord T, Oatley JM, Klein J,
            Ravichandran R, Tillman H, Kim M, Connelly JP, Pruett-Miller SM,
            Bookout AL, Binshtock E, Kaminski MM and Potts PR.
  TITLE     MAGE cancer-testis antigens protect the mammalian germline under
            environmental stress
  JOURNAL   Sci Adv 5 (5), eaav4832 (2019)
   PUBMED   31149633
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 325)
  AUTHORS   Gordeeva O, Gordeev A and Khaydukov S.
  TITLE     Expression dynamics of Mage family genes during self-renewal and
            differentiation of mouse pluripotent stem and teratocarcinoma cells
  JOURNAL   Oncotarget 10 (35), 3248-3266 (2019)
   PUBMED   31143371
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 325)
  AUTHORS   Hou S, Xian L, Shi P, Li C, Lin Z and Gao X.
  TITLE     The Magea gene cluster regulates male germ cell apoptosis without
            affecting the fertility in mice
  JOURNAL   Sci Rep 6, 26735 (2016)
   PUBMED   27226137
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK136064.1.
            
            On or before Jul 25, 2007 this sequence version replaced
            XP_913729.1, XP_001474676.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK136064.1, DV662442.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 37.23 cM"
     Protein         1..325
                     /product="melanoma-associated antigen 10"
                     /note="melanoma antigen family A, 10"
                     /calculated_mol_wt=35724
     Region          6..101
                     /region_name="MAGE_N"
                     /note="Melanoma associated antigen family N terminal;
                     pfam12440"
                     /db_xref="CDD:463582"
     Region          138..293
                     /region_name="MAGE"
                     /note="MAGE homology domain; pfam01454"
                     /db_xref="CDD:426270"
     CDS             1..325
                     /gene="Magea10"
                     /coded_by="NM_001085506.1:305..1282"
                     /db_xref="CCDS:CCDS41002.1"
                     /db_xref="GeneID:236852"
                     /db_xref="MGI:MGI:3588211"
ORIGIN      
        1 mprprkrrrc mvegqpeaqs vavtmeedss sssstysssf pssfsstsss yaltsgnsee
       61 gcaasrassp hsppgagssc tamissprsq vsadsegeds pgssqalpcg tslstgeidv
      121 kvdelvkyll lkylmqepvs kaeilsniir nyqdhfavif realecmqlv fglelkeidp
      181 ashtyiltia leltydgmmt dvqgipktgl limvlsiifm egncvsedmv wsilnnigly
      241 agnehfiyge prklitdnfv qegyleyrhv pgsnppfyef lwgprayaet tkmkiltflt
      301 singsdprsf pvwyaealrd eeqqe
//
LOCUS       NP_064402                320 aa            linear   ROD 23-NOV-2023
DEFINITION  melanoma antigen family A, 5 [Mus musculus].
ACCESSION   NP_064402
VERSION     NP_064402.1
DBSOURCE    REFSEQ: accession NM_020018.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 320)
  AUTHORS   Fon Tacer K, Montoya MC, Oatley MJ, Lord T, Oatley JM, Klein J,
            Ravichandran R, Tillman H, Kim M, Connelly JP, Pruett-Miller SM,
            Bookout AL, Binshtock E, Kaminski MM and Potts PR.
  TITLE     MAGE cancer-testis antigens protect the mammalian germline under
            environmental stress
  JOURNAL   Sci Adv 5 (5), eaav4832 (2019)
   PUBMED   31149633
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 320)
  AUTHORS   Chomez P, De Backer O, Bertrand M, De Plaen E, Boon T and Lucas S.
  TITLE     An overview of the MAGE gene family with the identification of all
            human members of the family
  JOURNAL   Cancer Res 61 (14), 5544-5551 (2001)
   PUBMED   11454705
REFERENCE   3  (residues 1 to 320)
  AUTHORS   Wang PJ, McCarrey JR, Yang F and Page DC.
  TITLE     An abundance of X-linked genes expressed in spermatogonia
  JOURNAL   Nat Genet 27 (4), 422-426 (2001)
   PUBMED   11279525
REFERENCE   4  (residues 1 to 320)
  AUTHORS   De Plaen E, De Backer O, Arnaud D, Bonjean B, Chomez P, Martelange
            V, Avner P, Baldacci P, Babinet C, Hwang SY, Knowles B and Boon T.
  TITLE     A new family of mouse genes homologous to the human MAGE genes
  JOURNAL   Genomics 55 (2), 176-184 (1999)
   PUBMED   9933564
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AJ005529.1.
            
            ##Evidence-Data-START##
            CDS exon combination :: BC109340.2, BY385101.1 [ECO:0000331]
            RNAseq introns       :: single sample supports all introns
                                    SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Mus musculus"
                     /strain="129"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 72.38 cM"
     Protein         1..320
                     /product="melanoma antigen family A, 5"
                     /note="melanoma antigen, family A, 5"
                     /calculated_mol_wt=36131
     Region          <43..78
                     /region_name="MAGE_N"
                     /note="Melanoma associated antigen family N terminal;
                     pfam12440"
                     /db_xref="CDD:463582"
     Region          134..271
                     /region_name="MAGE"
                     /note="MAGE homology domain; pfam01454"
                     /db_xref="CDD:426270"
     CDS             1..320
                     /gene="Magea5"
                     /gene_synonym="Mage-a5"
                     /coded_by="NM_020018.1:230..1192"
                     /db_xref="CCDS:CCDS30492.1"
                     /db_xref="GeneID:17141"
                     /db_xref="MGI:MGI:1333838"
ORIGIN      
        1 madfhntqyc nlqesaqaqq eldndqetme tseeeedttt snkvygsgip sppqspqray
       61 spcvalasip dspseeasik gsegledply llhnaqntkv ydlvdflvlk yqmkafttka
      121 emlesigrey eeyyplifse aseclkmvfg ldmveidpsv hsyilvtalg itydgmmtdv
      181 qgmpktgili avlsvifmkg nyvseeiiwe mlnniglygg rnpyihkdpr kliseefvqe
      241 gyleyrqvpn sdppsygflw gprafaetsk mkvlqffasi nkthpraype kyaealqdei
      301 drtkawilnr csnssdlltf
//
LOCUS       NP_064404                320 aa            linear   ROD 23-NOV-2023
DEFINITION  melanoma antigen family A, 8 [Mus musculus].
ACCESSION   NP_064404
VERSION     NP_064404.1
DBSOURCE    REFSEQ: accession NM_020020.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 320)
  AUTHORS   Fon Tacer K, Montoya MC, Oatley MJ, Lord T, Oatley JM, Klein J,
            Ravichandran R, Tillman H, Kim M, Connelly JP, Pruett-Miller SM,
            Bookout AL, Binshtock E, Kaminski MM and Potts PR.
  TITLE     MAGE cancer-testis antigens protect the mammalian germline under
            environmental stress
  JOURNAL   Sci Adv 5 (5), eaav4832 (2019)
   PUBMED   31149633
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 320)
  AUTHORS   Gordeeva O, Gordeev A and Khaydukov S.
  TITLE     Expression dynamics of Mage family genes during self-renewal and
            differentiation of mouse pluripotent stem and teratocarcinoma cells
  JOURNAL   Oncotarget 10 (35), 3248-3266 (2019)
   PUBMED   31143371
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 320)
  AUTHORS   Chomez P, De Backer O, Bertrand M, De Plaen E, Boon T and Lucas S.
  TITLE     An overview of the MAGE gene family with the identification of all
            human members of the family
  JOURNAL   Cancer Res 61 (14), 5544-5551 (2001)
   PUBMED   11454705
REFERENCE   4  (residues 1 to 320)
  AUTHORS   De Plaen E, De Backer O, Arnaud D, Bonjean B, Chomez P, Martelange
            V, Avner P, Baldacci P, Babinet C, Hwang SY, Knowles B and Boon T.
  TITLE     A new family of mouse genes homologous to the human MAGE genes
  JOURNAL   Genomics 55 (2), 176-184 (1999)
   PUBMED   9933564
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK145480.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK145480.1, BY735830.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 72.38 cM"
     Protein         1..320
                     /product="melanoma antigen family A, 8"
                     /note="melanoma antigen, family A, 8"
                     /calculated_mol_wt=36083
     Region          17..78
                     /region_name="MAGE_N"
                     /note="Melanoma associated antigen family N terminal;
                     pfam12440"
                     /db_xref="CDD:463582"
     Region          134..271
                     /region_name="MAGE"
                     /note="MAGE homology domain; pfam01454"
                     /db_xref="CDD:426270"
     CDS             1..320
                     /gene="Magea8"
                     /gene_synonym="Mage-a8"
                     /coded_by="NM_020020.4:310..1272"
                     /db_xref="CCDS:CCDS30490.1"
                     /db_xref="GeneID:17144"
                     /db_xref="MGI:MGI:1333827"
ORIGIN      
        1 madshniqyc nlqesaqaqq eldndqetmv tsqeeevttt snkvygsgip sppqspqray
       61 spcvalasip dspseeasik gsegledply llhnaqntkv ydlvdflvln yemkafptka
      121 emlesigrey eeyyplifse aseclkmvfg ldmvevdpfv hsymlvtalg itydgmmtdv
      181 qgmpktgili avlsvifmkg nyvseeiiwe mlnniglcgg rnpyihkdpr kliseefvqe
      241 gyleyrqvpn sdppsygflw gprafaetsk mkvlqffasi nkthpraype kyaealqdei
      301 drtkawilnr csnfsdlltf
//
LOCUS       NP_064401                320 aa            linear   ROD 23-NOV-2023
DEFINITION  melanoma antigen family A, 3 [Mus musculus].
ACCESSION   NP_064401 XP_001005253
VERSION     NP_064401.2
DBSOURCE    REFSEQ: accession NM_020017.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 320)
  AUTHORS   Fon Tacer K, Montoya MC, Oatley MJ, Lord T, Oatley JM, Klein J,
            Ravichandran R, Tillman H, Kim M, Connelly JP, Pruett-Miller SM,
            Bookout AL, Binshtock E, Kaminski MM and Potts PR.
  TITLE     MAGE cancer-testis antigens protect the mammalian germline under
            environmental stress
  JOURNAL   Sci Adv 5 (5), eaav4832 (2019)
   PUBMED   31149633
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 320)
  AUTHORS   Chomez P, De Backer O, Bertrand M, De Plaen E, Boon T and Lucas S.
  TITLE     An overview of the MAGE gene family with the identification of all
            human members of the family
  JOURNAL   Cancer Res 61 (14), 5544-5551 (2001)
   PUBMED   11454705
REFERENCE   3  (residues 1 to 320)
  AUTHORS   De Plaen E, De Backer O, Arnaud D, Bonjean B, Chomez P, Martelange
            V, Avner P, Baldacci P, Babinet C, Hwang SY, Knowles B and Boon T.
  TITLE     A new family of mouse genes homologous to the human MAGE genes
  JOURNAL   Genomics 55 (2), 176-184 (1999)
   PUBMED   9933564
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC119064.1.
            
            On Oct 21, 2009 this sequence version replaced NP_064401.1.
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC119064.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Mus musculus"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 72.38 cM"
     Protein         1..320
                     /product="melanoma antigen family A, 3"
                     /note="melanoma antigen, family A, 3"
                     /calculated_mol_wt=36076
     Region          <43..78
                     /region_name="MAGE_N"
                     /note="Melanoma associated antigen family N terminal;
                     pfam12440"
                     /db_xref="CDD:463582"
     Region          134..271
                     /region_name="MAGE"
                     /note="MAGE homology domain; pfam01454"
                     /db_xref="CDD:426270"
     CDS             1..320
                     /gene="Magea3"
                     /gene_synonym="Mage-a3"
                     /coded_by="NM_020017.2:65..1027"
                     /db_xref="CCDS:CCDS30489.1"
                     /db_xref="GeneID:17139"
                     /db_xref="MGI:MGI:1333832"
ORIGIN      
        1 madshntqyc nleesaqaqq eldndqetme tseeeedttt snkvygsaip sppqspqray
       61 spcvalasip dspseeasik gsegledplh llhnaqntkv ydlvdflvln yqmkafttka
      121 emlenigrey eeyyplifse aseclkmvfg ldmvevdssv htymlvtalg itydgmmtdv
      181 qgmpktgili avlsvifmkg nyvseeiiwe mlnniglcgg rdpyihkdpr kliseefvqe
      241 gyleyrqvpn sdppsygflw gprafaetsk mkvlqffasi nkthpraype kyaealqdei
      301 drtktwilnr csnssdlhtf
//
LOCUS       NP_035019               7152 aa            linear   ROD 23-NOV-2023
DEFINITION  nebulin [Mus musculus].
ACCESSION   NP_035019 XP_130232 XP_981613
VERSION     NP_035019.1
DBSOURCE    REFSEQ: accession NM_010889.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 7152)
  AUTHORS   Lindqvist J and Granzier H.
  TITLE     Pharmacological Inhibition of Myostatin in a Mouse Model of Typical
            Nemaline Myopathy Increases Muscle Size and Force
  JOURNAL   Int J Mol Sci 24 (20), 15124 (2023)
   PUBMED   37894805
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 7152)
  AUTHORS   Slick RA, Tinklenberg JA, Sutton J, Zhang L, Meng H, Beatka MJ,
            Vanden Avond M, Prom MJ, Ott E, Montanaro F, Heisner J, Toro R,
            Granzier H, Geurts AM, Stowe DF, Hill RB and Lawlor MW.
  TITLE     Aberrations in Energetic Metabolism and Stress-Related Pathways
            Contribute to Pathophysiology in the Neb Conditional Knockout Mouse
            Model of Nemaline Myopathy
  JOURNAL   Am J Pathol 193 (10), 1528-1547 (2023)
   PUBMED   37422147
  REMARK    GeneRIF: Aberrations in Energetic Metabolism and Stress-Related
            Pathways Contribute to Pathophysiology in the Neb Conditional
            Knockout Mouse Model of Nemaline Myopathy.
REFERENCE   3  (residues 1 to 7152)
  AUTHORS   Ranu N, Laitila J, Dugdale HF, Mariano J, Kolb JS,
            Wallgren-Pettersson C, Witting N, Vissing J, Vilchez JJ, Fiorillo
            C, Zanoteli E, Auranen M, Jokela M, Tasca G, Claeys KG, Voermans
            NC, Palmio J, Huovinen S, Moggio M, Beck TN,
            Kontrogianni-Konstantopoulos A, Granzier H and Ochala J.
  TITLE     NEB mutations disrupt the super-relaxed state of myosin and remodel
            the muscle metabolic proteome in nemaline myopathy
  JOURNAL   Acta Neuropathol Commun 10 (1), 185 (2022)
   PUBMED   36528760
  REMARK    GeneRIF: NEB mutations disrupt the super-relaxed state of myosin
            and remodel the muscle metabolic proteome in nemaline myopathy.
            Publication Status: Online-Only
REFERENCE   4  (residues 1 to 7152)
  AUTHORS   Wang Z, Grange M, Pospich S, Wagner T, Kho AL, Gautel M and Raunser
            S.
  TITLE     Structures from intact myofibrils reveal mechanism of thin filament
            regulation through nebulin
  JOURNAL   Science 375 (6582), eabn1934 (2022)
   PUBMED   35175800
  REMARK    GeneRIF: Structures from intact myofibrils reveal mechanism of thin
            filament regulation through nebulin.
REFERENCE   5  (residues 1 to 7152)
  AUTHORS   Zhang X, Wang Z, Xu Q, Chen Y, Liu W, Zhong T, Li H, Quan C, Zhang
            L and Cui CP.
  TITLE     Splicing factor Srsf5 deletion disrupts alternative splicing and
            causes noncompaction of ventricular myocardium
  JOURNAL   iScience 24 (10), 103097 (2021)
   PUBMED   34622152
  REMARK    Publication Status: Online-Only
REFERENCE   6  (residues 1 to 7152)
  AUTHORS   Miner JH, Miller JB and Wold BJ.
  TITLE     Skeletal muscle phenotypes initiated by ectopic MyoD in transgenic
            mouse heart
  JOURNAL   Development 114 (4), 853-860 (1992)
   PUBMED   1618148
REFERENCE   7  (residues 1 to 7152)
  AUTHORS   Askew DS, Bartholomew C, Buchberg AM, Valentine MB, Jenkins NA,
            Copeland NG and Ihle JN.
  TITLE     His-1 and His-2: identification and chromosomal mapping of two
            commonly rearranged sites of viral integration in a myeloid
            leukemia
  JOURNAL   Oncogene 6 (11), 2041-2047 (1991)
   PUBMED   1682866
REFERENCE   8  (residues 1 to 7152)
  AUTHORS   Siracusa LD, Alvord WG, Bickmore WA, Jenkins NA and Copeland NG.
  TITLE     Interspecific backcross mice show sex-specific differences in
            allelic inheritance
  JOURNAL   Genetics 128 (4), 813-821 (1991)
   PUBMED   1916246
REFERENCE   9  (residues 1 to 7152)
  AUTHORS   Malo D, Schurr E, Dorfman J, Canfield V, Levenson R and Gros P.
  TITLE     Three brain sodium channel alpha-subunit genes are clustered on the
            proximal segment of mouse chromosome 2
  JOURNAL   Genomics 10 (3), 666-672 (1991)
   PUBMED   1679748
REFERENCE   10 (residues 1 to 7152)
  AUTHORS   Schurr E, Skamene E and Gros P.
  TITLE     Mapping of the gene coding for the muscle protein nebulin (Neb) to
            the proximal region of mouse chromosome 2
  JOURNAL   Cytogenet Cell Genet 57 (4), 214-216 (1991)
   PUBMED   1683831
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL845355.11 and AL844571.8.
            
            On or before Jul 25, 2007 this sequence version replaced
            XP_981613.2, XP_130232.7.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            RNAseq introns :: partial sample support SAMN00849374, SAMN00849375
                              [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on conservation
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..7152
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 29.98 cM"
     Protein         1..7152
                     /product="nebulin"
                     /calculated_mol_wt=828535
     Region          78..104
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          178..207
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          248..278
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          532..562
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          573..600
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          611..638
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          784..811
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          820..847
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          858..885
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          888..918
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          919..948
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          1102..1129
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          1163..1192
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          1232..1262
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          1267..1297
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          1308..1335
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          1346..1373
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          1476..1506
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          1511..1541
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          1590..1617
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          1756..1785
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          1834..1861
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          1895..1923
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          1964..1993
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          2000..2029
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          2078..2105
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          2244..2273
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          2322..2349
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          2451..2481
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          2491..2518
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          2565..2592
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          2734..2761
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          2808..2835
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          3051..3078
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          3180..3210
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          3294..3321
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          3423..3453
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          3463..3490
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          3567..3597
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          3603..3630
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          3780..3807
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          3909..3938
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          3945..3974
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          3985..4012
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          4152..4182
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          4188..4217
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          4228..4254
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          4266..4293
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          4395..4425
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          4431..4460
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          4886..4913
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          5341..5368
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          5728..5755
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          5933..5963
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          6359..6389
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          6469..6497
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          6546..6572
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          6612..6638
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          6767..6792
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          6900..6927
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          7095..7152
                     /region_name="SH3_Nebulin_C"
                     /note="C-terminal Src Homology 3 domain of Nebulin;
                     cd11933"
                     /db_xref="CDD:212866"
     Site            order(7102,7104,7107,7111,7129..7130,7145,7147..7148)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212866"
     CDS             1..7152
                     /gene="Neb"
                     /coded_by="NM_010889.1:420..21878"
                     /db_xref="CCDS:CCDS50584.1"
                     /db_xref="GeneID:17996"
                     /db_xref="MGI:MGI:97292"
ORIGIN      
        1 madeeeyeev ieyyteetvy eevpgetite vyettttrts dygqsetatp alaqpqpakp
       61 verkkvirkk vdsskfmtpy iqhsqkmqdl fssnkykeny ekakgqpyai tsdtpelrri
      121 kkvqdqlsev kyrmdgdvak tichvdekak diehakkvsq qvskvlykqn wedtkdkyll
      181 ppdapelvqa vkntamfskk lytedweadk alfypyndsp elrrvaqaqk alsdiaykkg
      241 lteqqtqfts lpdppevefa kkvtnqvskq kykedyekkv kgkwsetpcf eiatarmnad
      301 nlssrkyqed fenmkdqiyf mqtetpeykm nkqagvaask vkykqdyekn kgkadynvlp
      361 asenpllrql ktagnvlsdk lykenyektk arsinycetp kfqldtvlqn fssdtkykds
      421 ylknilghyv gsfedpyhth cmkvtaqnsd knykaeyeed rgkgffpqti tqeyeaikkl
      481 dqckdhaykv hpdktkftqv tdspvlvqaq vnskqlsdln ykakhesekf kchippdapa
      541 fiqhrvnayn lsdnvykqdw ekskakkfdi kvdaipllaa kansknasdv mykkdyeksk
      601 gkmigalsin ddpkmlhslk taknqsdrly renyektkak smnycetpky qldtllknfs
      661 eakykdsyvk nmlghyvgsf edpyhthcmk vsaqnsdksy kaeyeedkgk cyfpqtitqe
      721 yesikkldqc kdhtykvhpd ktrftavtdt pvllqaqlnt kqlsdlnyka khegekfkcs
      781 vpadapefiq hrvnaynlsd nvykhdweks kakkfdikvd aipllaakan sknasdvmyk
      841 kdyekskgkm igalsinddp kmlhslktak nqsdreyrkd yeksktiyta pldmiqvtqa
      901 kksqaiasdv dykhvlhnys yppdsinvdl akkayalqsd veykadynsw mkgcgwvpfg
      961 slemekakra seilnekkyr qhpdtlkfts iedapitvqs kinqaqrsdi aykakgeeil
     1021 hkynlpadlp qfiqakvnay nisenmykad lkdlskkgyd lridaipika akaarqaasd
     1081 ihykkdyeka kgkmvgfqsl qddpklvhym nvakiqsdre ykkdyektkt kyntphdmfd
     1141 vvaakkaqdv isntnykhsl hhytylpdam dlelsknmmh iqsdnayked yntwmkgigw
     1201 ipigsldqek vkkagdalse kkyrqhpdtl kftsivdspv mvqakqntqq asdilykakg
     1261 edvkhkytln pdlpqflqak cnaynisdvc ykrdwhdlia kgnnvladai pitaakssrn
     1321 iasdykykea yekakgkhvg frslqddpkl vhymnvaklq sdreykknye ntktsyhtpg
     1381 dmvsitaarm aqdvatnvny kqplhhytyl pdalslehtr nanqiqsdnv ykdeynsffk
     1441 gigwipigsl evekakkage alnerkyrqh pdtikftsvp dsmgmvlaqq ntkqlsdlny
     1501 kvegekmkhk ytmdpelpqf iqakvnainm sdahykadwk ktlakgydlr pdaipivaak
     1561 ssrniasdck ykeayekarg kqigflslqd dpklvhymnv akiqsdreyk kgyeasktry
     1621 htpldmfsvt aakksqevat nsnyrqpyhn ytllpdalnv ehsrnamqiq sdnlyksdft
     1681 hwmkgigwvp idslevekak kageilserk yrqhpeklkf tysmdtmeqa lnksnkltmd
     1741 krlytekwnk dktsihvmpd tpdillsrvn qitmsdklyk agweeektkg ydlkpdaiai
     1801 kaakasrdia sdykykqaye qskgkhigfr sleddpklvh fmqvakiqsd reykkgyeks
     1861 ktsfhtpvdm fsvvaakksq evatnanyrn iihtynmlpd amsfelaknm mqiqsdnqyk
     1921 adyadfmkgi gwlplgslea eknkkameii sekkyrqhpd tlkystlmds mnmvlaqnna
     1981 kimnknlykq aweadktkih impdipeivl akanainmsd klyklslees rkkgydlrtd
     2041 aipikaakas rdiasdykyk hsyekekgkm vgfrsleddp klvhsmqvak mqsdreykkn
     2101 yektktsyht padmlsvtaa kdaqanitnt nykrlihkyi llpdamniel trnmnhiqsd
     2161 neykqdyrew yrglgwspag slevekakka teyasdqkyr qhpstfqfkk ltdsmdmvla
     2221 kqnahtmnkh lytidwnkdk tkihvmpdtp dilqakqnqt lysqksyrlg weealkkgyd
     2281 lpvdaisvql aktsrdiasd fkykqgyrkq lghhigflsv qddpklvlsm nvakmqsdre
     2341 ykkdfekwkt kytspvdmlg vvlakkcqal vsdadyrnyl hqwtclpdqn dviqakkvye
     2401 lqsenmyksd lewlrgigws plgsleaekn kraseiisek kyrqppdrnk ftsipdamdi
     2461 vlaktnaknr sdrlyreawd kdktqihimp dtpdiilaka nlintsdkly kmgyeelkkk
     2521 gydlpvdaip ikaakasrei aseykykegf rkqlghhiga rnikddpkmm wsmhvakiqs
     2581 dreykkdfek wktkysspvd mlgvvlakkc qtlvsdadyr nylhqwtclp dqndviharq
     2641 aydlqsdnvy kadlqwlkgi gwipsgsled eknkratqil sdhvyrqhpn kfkfsslmds
     2701 mpmvlaknna itmnhhlyte awnkdkttvh impdtpevil akqnkvnyse klyklgleea
     2761 krkgydmrld aipiktakas rdiasdfkyk egyrkqlghh igargihddp kmmwsmhvak
     2821 iqsdreykkd fekwktkyss pvdmlgvvla kkcqtlvsda dyrnylhqwt clpdqndvih
     2881 arqaydlqsd nmyksdlqwm rgigwvpigs ldvekckrat eilsdkiyrq ppdkfkftsv
     2941 tdsleqvlak nnaitmnkrl yteawdkdkt qihimpdtpe imlarmnkvn yseslyklan
     3001 eeakkkgydl rsdaipivaa kasrdiasdy kykdgyrkql ghhigarnik ddpkmmwsmh
     3061 vakiqsdrey kkdfekwktk ysspvdmlgv vlakkcqilv sdidykhplh ewtclpdqnd
     3121 viharqaydl qsdnvyksdl qwmrgigwvp igsldvvkck raaeilsdni yrqppnkfkf
     3181 tsvtdsleqv laksnalnmn krlyteawdk dkiqihvmpd tpeimlarqn rinyseslyk
     3241 laneeakkkg ydlrvdaipi vaakasrdia sdykykvgyr kqlghhigar nieddpkmmw
     3301 smhvakiqsd reykkdfekw ktkysspvdm lgvvlakkcq tlvsdvdyrn ylhqwtclpd
     3361 qndviharqa ydlqsdnvyk sdlqwmrgig wvpigsldvv kckraaeils dniyrqppnk
     3421 fkftsvtdsl eqvlaksnal nmnkrlytea wdkdktqihi mpdtpeimla rqnkinyses
     3481 lyrqameeak kegydlrsda ipivaakasr diasdykyke ayrkqlghhi garaihddpk
     3541 mmwslhiakv qsdreykkef ekyktryssp vdmlgivlak kcqtlvsdvd ykhplhewtc
     3601 lpdqndviqa rkaydlqsdn lykadlewmk gigwvpigsl evvkakrate ilsdniyrqr
     3661 pdtlkftsit dsleqvlakn naitmnkrly teawdndkkt ihvmpdtpei mlaklnriny
     3721 sdklykvsle earrqgydlr vdaipirsak asreiasdyk ykegyrkqlg hhigarnikd
     3781 dpkmmwsmhv akiqsdreyk kdfekwktky sspvdmlgvv lakkcqilvs didykhplhe
     3841 wtclpdqndv iqarkaydlq sdavykadle wlrgigwvpi gsvevekvkr ageilsdrky
     3901 rqpadqlkft citdtpeivl aksnaitmsk hlyteawdad kasihvmpdt peillaksns
     3961 anishklytk gwdeskmkdy dlredaisik sakasrdias dykykeayek qkghhigaqs
     4021 veddprilca mhagkiysdr eykkefqkwk tkfsspvdml gvvlakkcqt lvsdvdyrny
     4081 lhnwtclpdq ndiiqakkay elqsdsvyka dlewlrgigw mpegsiemtr vkgaqdlvne
     4141 rlyrtrpeal kftsivdtpe vvlakanslq mserlyqeaw nkdktnislp ldtpamlqaq
     4201 inalqisnkl yqkdwdeakq kgydlradai eikhakasre iaseykykeg yrkqlghhvg
     4261 frslqddpkl vwsihaakiq sdreykkaye kskgiyntpl dmmsivqakk cqvlvsdvdy
     4321 rnylhqwtcl pdqndviqak kayelqsdai ykadlewlrg igwmpegspe vlrvknaqei
     4381 lcdsvyrtpv vklkytsivd tpevvlaksn aenisipkyr evwdkdktsi himpdtpein
     4441 laranalnvs nklyregwde vkmscdvrld aipiqaakas reiasdykyk ldhekqkghy
     4501 vgtltarddn kirwaliagk iqnereyrlq wakwktkfqs pvdmlsilhs kkcqtlvsdi
     4561 dyrnylhewt cmpdqndviq akkayelqsd avykadlewl rgigwmpnds vsvnhakhaa
     4621 difsekkyrt kietlnftpv ddrvdyvtak qsseirddik yrkdwnaiks kytltetpll
     4681 htaqeaaril dqylykegwe kqkatgyilp pdavpfvhah hssdvqselk ykaehvkqrg
     4741 hyvgvptmrd dpklvwfeha gqiqndrlyk esyhkskaki nipadmvsvv aakegqnlvs
     4801 didyrqylhq wtchpdqndv iqakiaydlq sdnvykadle wlrgigwipl dsvdhvrvtk
     4861 nqemvnqiky kkdalanypn ftsvedppei vlakinsvnq sdvkyketfn kakgkyifsp
     4921 dtpyishskd mgklystily kgawegtkay gytlderyip ivgakhadlv nselkykety
     4981 ekqkghylag keisefpgvv hcldfqqmrs alnyrrdyed tkanvhipnd mmnhvlakrc
     5041 qyilsdleyr hyfhqwtslp eepnvirarn aqeilsdnvy kddlnwlkgi gcyvwdtpqi
     5101 lhakksydlq sqlqytaask enlqnynlvt dtpvyvtalq sginasevky kenyhqikdk
     5161 yttvletady drtkhlksly ssniykeawd kvkatsynlp tstlslthak nqkhlashik
     5221 yreeyekfka lytlpksvdd dpntarclrv gklnidrlyr svyeknkmki nivpdmvemv
     5281 takdsqkkvs eidyrlhlhe wichpdlqvn shvrkvtdqi sdivykddlt wlkgigcyvw
     5341 dtpeilhakh aydlrndiky kahvqktrnd yklvtdtpvy vqavksgkql sdavyhydyv
     5401 hsvrgkvapt tktvdldral hayklqsenl ykkglrflpt gyrlpvdtph fnhtkdtrym
     5461 ssyfkykeay ehikangytl gpkdvpfvhv rrvnnvtser lyrelyhklk dkihttpdtp
     5521 eirqvkktqe avseliyksd ffkmqghmis lpytpqvlhc ryvgditsdi kykedlqilk
     5581 glgcflydtp dmvrsrhlrk lwsnylytdn arkmrdkykv vldtpeyrkv qelkthlsel
     5641 vyrasgkkqk siftsvpdtp dllrakrgqk lqsqylyvel atkerphhha gnqttalqha
     5701 kdvkdmvsek kykiqyekmk dkytpvadtp ilirakrayw nasdlryket fqktkgryht
     5761 vkdaldivyh rkvtddiskv kykenymsql giwssipdrp ehfhhravtd avsdvkyked
     5821 ltwlkgigcy aydtpdltla eqnktlysky kykevfertk snfkyvadcp inrhfkyatq
     5881 lmnekkyrad yeqrkdkyhl vvdeprhlla ktagdqisqi kyrkkyeksk dkftsvvdtp
     5941 ehlrttkvnk qisdilykle ynkarprgyt tihdtpmllh vrkvkdevsd lkykevyqrn
     6001 ksnctikpda vhikaakday kvntnldykk qyeankaywk wtpdrpdfiq aaksslqqsd
     6061 feykldrefl kgcklsvtdd kdmvlalrns liesdlkyke khvkergsch avpdtpqill
     6121 aktvsnlvse nkykdhvkkh laqgsyttlp etrdtvhvka vtkhvsdtny kkkfvkekgk
     6181 snysimqepp evkhamevak kqsdvaykkd akenlhyttv adrpdikkat qaakqaseve
     6241 yrakhrkegs hglsmlgrpd iemakkaakl ssqvkyrenf dkekgktpky npkdsqlykt
     6301 mkdannlase vkykadlkkl hkpvtdmkes limhhvlnts qlassyqykk nyekskghyh
     6361 tipdnleqlh hreatelqsi vkykekyeke rgkpmldfet ptyitakesq qmqsgkeyrk
     6421 dyeesikgrn ltglevtpal lhvrhatkia sekeyrkdle esirgrglte medtpdmlra
     6481 knatqilnek eykrdlelev kgrglnaman etpdfmrarn atdiasqiky kqsaemekan
     6541 ftsvvdtpei ihaqqvknls sqkkykedae ksmsyyetvl dtpemqrvre nqknfsllqy
     6601 qcdlknskgk itvvqdtpei lrvkenqknf ssvlykedvs pgtaigktpe mlrvkqtqdh
     6661 issvkykeai gqgtpipdlp evkrvketqk hissvmyken pgtgipttvt peiervkrnq
     6721 enfssvlyke slgkgtptai tpemervkrn qenfssvlyk enmgkgtplp vtpemervkh
     6781 nqenissvly kenvgkatpt pvtpemqrvk rnqenissvl ykenmgkatp tpftpemerv
     6841 krnqenfssv lykenmrkat ptpvtpdmer akrnqeniss vlysdsfrkq iqgkaayvld
     6901 tpemrrvret qrhistvkyh edfekhkgcf tpvvtdpite rvkkntqdfs dinyrgiqrk
     6961 vvemeqkrnd qdqdtitglr vwrtnpgsvf dydpaedniq srslhminvq aqrrsrdqsr
     7021 sasalsisgg eeksehseaa dqrlstysdg gaffsatsta ykhvkttqlp qqrsssvatq
     7081 qttlssipsh pstagkifra iydyiaadad evsfkdgdai vnaqaidegw mygtvqrtgr
     7141 tgmlpanyve ai
//
LOCUS       NP_001349161             117 aa            linear   ROD 24-NOV-2023
DEFINITION  Putative protein T-ENOL-like [Mus musculus].
ACCESSION   NP_001349161
VERSION     NP_001349161.1
DBSOURCE    REFSEQ: accession NM_001362232.2
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 117)
  AUTHORS   Xia A, Yuan W, Wang Q, Xu J, Gu Y, Zhang L, Chen C, Wang Z, Wu D,
            He Q, Yu W, Wang F, Xue C, Zhang Y, Bao G, Tao X, Liu S, Wang S, Hu
            Z and Sun B.
  TITLE     The cancer-testis lncRNA lnc-CTHCC promotes hepatocellular
            carcinogenesis by binding hnRNP K and activating YAP1 transcription
  JOURNAL   Nat Cancer 3 (2), 203-218 (2022)
   PUBMED   35122073
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC122863.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CA466438.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 69.26 cM"
     Protein         1..117
                     /product="Putative protein T-ENOL-like"
                     /calculated_mol_wt=12601
     CDS             1..117
                     /gene="Cdiptos"
                     /gene_synonym="D830044I16Rik"
                     /coded_by="NM_001362232.2:17..370"
                     /db_xref="CCDS:CCDS90331.1"
                     /db_xref="GeneID:381922"
                     /db_xref="MGI:MGI:2443610"
ORIGIN      
        1 mastsarsgd kkdirssqaa aslgggqkls cseefltris teltdealfi arsrlsplpn
       61 kekntkdqgt qisrhvfftk trgtdtrsdk nrtrtkahll psprekgplp nslttgg
//
LOCUS       NP_001406537             117 aa            linear   ROD 24-NOV-2023
DEFINITION  Putative protein T-ENOL-like [Mus musculus].
ACCESSION   NP_001406537
VERSION     NP_001406537.1
DBSOURCE    REFSEQ: accession NM_001419608.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 117)
  AUTHORS   Xia A, Yuan W, Wang Q, Xu J, Gu Y, Zhang L, Chen C, Wang Z, Wu D,
            He Q, Yu W, Wang F, Xue C, Zhang Y, Bao G, Tao X, Liu S, Wang S, Hu
            Z and Sun B.
  TITLE     The cancer-testis lncRNA lnc-CTHCC promotes hepatocellular
            carcinogenesis by binding hnRNP K and activating YAP1 transcription
  JOURNAL   Nat Cancer 3 (2), 203-218 (2022)
   PUBMED   35122073
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC122863.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR17784648.115768.1,
                                           SRR13862051.3322083.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 69.26 cM"
     Protein         1..117
                     /product="Putative protein T-ENOL-like"
                     /calculated_mol_wt=12601
     CDS             1..117
                     /gene="Cdiptos"
                     /gene_synonym="D830044I16Rik"
                     /coded_by="NM_001419608.1:35..388"
                     /db_xref="GeneID:381922"
                     /db_xref="MGI:MGI:2443610"
ORIGIN      
        1 mastsarsgd kkdirssqaa aslgggqkls cseefltris teltdealfi arsrlsplpn
       61 kekntkdqgt qisrhvfftk trgtdtrsdk nrtrtkahll psprekgplp nslttgg
//
LOCUS       NP_001406536             117 aa            linear   ROD 24-NOV-2023
DEFINITION  Putative protein T-ENOL-like [Mus musculus].
ACCESSION   NP_001406536 XP_030098585
VERSION     NP_001406536.1
DBSOURCE    REFSEQ: accession NM_001419607.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 117)
  AUTHORS   Xia A, Yuan W, Wang Q, Xu J, Gu Y, Zhang L, Chen C, Wang Z, Wu D,
            He Q, Yu W, Wang F, Xue C, Zhang Y, Bao G, Tao X, Liu S, Wang S, Hu
            Z and Sun B.
  TITLE     The cancer-testis lncRNA lnc-CTHCC promotes hepatocellular
            carcinogenesis by binding hnRNP K and activating YAP1 transcription
  JOURNAL   Nat Cancer 3 (2), 203-218 (2022)
   PUBMED   35122073
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC122863.4.
            
            On Apr 12, 2023 this sequence version replaced XP_030098585.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5189685.97705.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on manual assertion, conservation,
                                      expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 69.26 cM"
     Protein         1..117
                     /product="Putative protein T-ENOL-like"
                     /calculated_mol_wt=12601
     CDS             1..117
                     /gene="Cdiptos"
                     /gene_synonym="D830044I16Rik"
                     /coded_by="NM_001419607.1:329..682"
                     /db_xref="GeneID:381922"
                     /db_xref="MGI:MGI:2443610"
ORIGIN      
        1 mastsarsgd kkdirssqaa aslgggqkls cseefltris teltdealfi arsrlsplpn
       61 kekntkdqgt qisrhvfftk trgtdtrsdk nrtrtkahll psprekgplp nslttgg
//
LOCUS       NP_001412663             238 aa            linear   ROD 24-NOV-2023
DEFINITION  methyltransferase-like protein 27 isoform 1 [Mus musculus].
ACCESSION   NP_001412663 XP_036021512
VERSION     NP_001412663.1
DBSOURCE    REFSEQ: accession NM_001425734.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 238)
  AUTHORS   Kole C, Berdugo N, Da Silva C, Ait-Ali N, Millet-Puel G, Pagan D,
            Blond F, Poidevin L, Ripp R, Fontaine V, Wincker P, Zack DJ, Sahel
            JA, Poch O and Leveillard T.
  TITLE     Identification of an Alternative Splicing Product of the Otx2 Gene
            Expressed in the Neural Retina and Retinal Pigmented Epithelial
            Cells
  JOURNAL   PLoS One 11 (3), e0150758 (2016)
   PUBMED   26985665
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 238)
  AUTHORS   DeSilva U, Elnitski L, Idol JR, Doyle JL, Gan W, Thomas JW,
            Schwartz S, Dietrich NL, Beckstrom-Sternberg SM, McDowell JC,
            Blakesley RW, Bouffard GG, Thomas PJ, Touchman JW, Miller W and
            Green ED.
  TITLE     Generation and comparative analysis of approximately 3.3 Mb of
            mouse genomic sequence orthologous to the region of human
            chromosome 7q11.23 implicated in Williams syndrome
  JOURNAL   Genome Res 12 (1), 3-15 (2002)
   PUBMED   11779826
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC079938.3.
            
            On Nov 24, 2023 this sequence version replaced XP_036021512.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5189682.19739.1,
                                           SRR13861894.779017.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 74.89 cM"
     Protein         1..238
                     /product="methyltransferase-like protein 27 isoform 1"
                     /note="Williams-Beuren syndrome chromosome region 27
                     homolog; Williams Beuren syndrome chromosome region 27"
                     /calculated_mol_wt=25734
     Region          32..192
                     /region_name="COG4976"
                     /note="Predicted methyltransferase, contains TPR repeat
                     [General function prediction only]"
                     /db_xref="CDD:444001"
     CDS             1..238
                     /gene="Mettl27"
                     /gene_synonym="Wbscr27"
                     /coded_by="NM_001425734.1:43..759"
                     /note="isoform 1 is encoded by transcript variant 10"
                     /db_xref="GeneID:79565"
                     /db_xref="MGI:MGI:1933146"
ORIGIN      
        1 mtqeeagrlp qvlarvgtsh gitdlacklr fyddwapeyd qdvaalkyra prlavdclsr
       61 afrgsphdal ildvacgtgl vavelqargf lqvqgvdgsp emlkqararg lyhhlslctl
      121 gqeplpdpeg tfdaviivga lsegqvpcsa ipellrvtkp gglvclttrt npsnlpyket
      181 leatldsler agvweclvtq pvdhwelats eqetglgtca ndgfisgiiy lyrkqetv
//
LOCUS       NP_001412661             207 aa            linear   ROD 24-NOV-2023
DEFINITION  methyltransferase-like protein 27 isoform 2 [Mus musculus].
ACCESSION   NP_001412661 XP_030110775
VERSION     NP_001412661.1
DBSOURCE    REFSEQ: accession NM_001425732.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 207)
  AUTHORS   Kole C, Berdugo N, Da Silva C, Ait-Ali N, Millet-Puel G, Pagan D,
            Blond F, Poidevin L, Ripp R, Fontaine V, Wincker P, Zack DJ, Sahel
            JA, Poch O and Leveillard T.
  TITLE     Identification of an Alternative Splicing Product of the Otx2 Gene
            Expressed in the Neural Retina and Retinal Pigmented Epithelial
            Cells
  JOURNAL   PLoS One 11 (3), e0150758 (2016)
   PUBMED   26985665
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 207)
  AUTHORS   DeSilva U, Elnitski L, Idol JR, Doyle JL, Gan W, Thomas JW,
            Schwartz S, Dietrich NL, Beckstrom-Sternberg SM, McDowell JC,
            Blakesley RW, Bouffard GG, Thomas PJ, Touchman JW, Miller W and
            Green ED.
  TITLE     Generation and comparative analysis of approximately 3.3 Mb of
            mouse genomic sequence orthologous to the region of human
            chromosome 7q11.23 implicated in Williams syndrome
  JOURNAL   Genome Res 12 (1), 3-15 (2002)
   PUBMED   11779826
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC079938.3.
            
            On Nov 24, 2023 this sequence version replaced XP_030110775.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: ERR3363658.5179199.1,
                                           SRR7652917.971846.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 74.89 cM"
     Protein         1..207
                     /product="methyltransferase-like protein 27 isoform 2"
                     /note="Williams-Beuren syndrome chromosome region 27
                     homolog; Williams Beuren syndrome chromosome region 27"
                     /calculated_mol_wt=22571
     Region          32..>127
                     /region_name="COG4976"
                     /note="Predicted methyltransferase, contains TPR repeat
                     [General function prediction only]"
                     /db_xref="CDD:444001"
     CDS             1..207
                     /gene="Mettl27"
                     /gene_synonym="Wbscr27"
                     /coded_by="NM_001425732.1:142..765"
                     /note="isoform 2 is encoded by transcript variant 8"
                     /db_xref="GeneID:79565"
                     /db_xref="MGI:MGI:1933146"
ORIGIN      
        1 mtqeeagrlp qvlarvgtsh gitdlacklr fyddwapeyd qdvaalkyra prlavdclsr
       61 afrgsphdal ildvacgtgl vavelqargf lqvqgvdgsp emlkqararg lyhhlslctl
      121 gqeplpdpeg glvclttrtn psnlpyketl eatldslera gvweclvtqp vdhwelatse
      181 qetglgtcan dgfisgiiyl yrkqetv
//
LOCUS       NP_001412662             207 aa            linear   ROD 24-NOV-2023
DEFINITION  methyltransferase-like protein 27 isoform 2 [Mus musculus].
ACCESSION   NP_001412662 XP_036021514
VERSION     NP_001412662.1
DBSOURCE    REFSEQ: accession NM_001425733.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 207)
  AUTHORS   Kole C, Berdugo N, Da Silva C, Ait-Ali N, Millet-Puel G, Pagan D,
            Blond F, Poidevin L, Ripp R, Fontaine V, Wincker P, Zack DJ, Sahel
            JA, Poch O and Leveillard T.
  TITLE     Identification of an Alternative Splicing Product of the Otx2 Gene
            Expressed in the Neural Retina and Retinal Pigmented Epithelial
            Cells
  JOURNAL   PLoS One 11 (3), e0150758 (2016)
   PUBMED   26985665
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 207)
  AUTHORS   DeSilva U, Elnitski L, Idol JR, Doyle JL, Gan W, Thomas JW,
            Schwartz S, Dietrich NL, Beckstrom-Sternberg SM, McDowell JC,
            Blakesley RW, Bouffard GG, Thomas PJ, Touchman JW, Miller W and
            Green ED.
  TITLE     Generation and comparative analysis of approximately 3.3 Mb of
            mouse genomic sequence orthologous to the region of human
            chromosome 7q11.23 implicated in Williams syndrome
  JOURNAL   Genome Res 12 (1), 3-15 (2002)
   PUBMED   11779826
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC079938.3.
            
            On Nov 24, 2023 this sequence version replaced XP_036021514.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: ERR3363658.4597270.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 74.89 cM"
     Protein         1..207
                     /product="methyltransferase-like protein 27 isoform 2"
                     /note="Williams-Beuren syndrome chromosome region 27
                     homolog; Williams Beuren syndrome chromosome region 27"
                     /calculated_mol_wt=22571
     Region          32..>127
                     /region_name="COG4976"
                     /note="Predicted methyltransferase, contains TPR repeat
                     [General function prediction only]"
                     /db_xref="CDD:444001"
     CDS             1..207
                     /gene="Mettl27"
                     /gene_synonym="Wbscr27"
                     /coded_by="NM_001425733.1:43..666"
                     /note="isoform 2 is encoded by transcript variant 9"
                     /db_xref="GeneID:79565"
                     /db_xref="MGI:MGI:1933146"
ORIGIN      
        1 mtqeeagrlp qvlarvgtsh gitdlacklr fyddwapeyd qdvaalkyra prlavdclsr
       61 afrgsphdal ildvacgtgl vavelqargf lqvqgvdgsp emlkqararg lyhhlslctl
      121 gqeplpdpeg glvclttrtn psnlpyketl eatldslera gvweclvtqp vdhwelatse
      181 qetglgtcan dgfisgiiyl yrkqetv
//
LOCUS       NP_001412660             207 aa            linear   ROD 24-NOV-2023
DEFINITION  methyltransferase-like protein 27 isoform 2 [Mus musculus].
ACCESSION   NP_001412660 XP_036021513
VERSION     NP_001412660.1
DBSOURCE    REFSEQ: accession NM_001425731.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 207)
  AUTHORS   Kole C, Berdugo N, Da Silva C, Ait-Ali N, Millet-Puel G, Pagan D,
            Blond F, Poidevin L, Ripp R, Fontaine V, Wincker P, Zack DJ, Sahel
            JA, Poch O and Leveillard T.
  TITLE     Identification of an Alternative Splicing Product of the Otx2 Gene
            Expressed in the Neural Retina and Retinal Pigmented Epithelial
            Cells
  JOURNAL   PLoS One 11 (3), e0150758 (2016)
   PUBMED   26985665
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 207)
  AUTHORS   DeSilva U, Elnitski L, Idol JR, Doyle JL, Gan W, Thomas JW,
            Schwartz S, Dietrich NL, Beckstrom-Sternberg SM, McDowell JC,
            Blakesley RW, Bouffard GG, Thomas PJ, Touchman JW, Miller W and
            Green ED.
  TITLE     Generation and comparative analysis of approximately 3.3 Mb of
            mouse genomic sequence orthologous to the region of human
            chromosome 7q11.23 implicated in Williams syndrome
  JOURNAL   Genome Res 12 (1), 3-15 (2002)
   PUBMED   11779826
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC079938.3.
            
            On Nov 24, 2023 this sequence version replaced XP_036021513.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR13861890.129042.1,
                                           ERR3363658.1757876.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 74.89 cM"
     Protein         1..207
                     /product="methyltransferase-like protein 27 isoform 2"
                     /note="Williams-Beuren syndrome chromosome region 27
                     homolog; Williams Beuren syndrome chromosome region 27"
                     /calculated_mol_wt=22571
     Region          32..>127
                     /region_name="COG4976"
                     /note="Predicted methyltransferase, contains TPR repeat
                     [General function prediction only]"
                     /db_xref="CDD:444001"
     CDS             1..207
                     /gene="Mettl27"
                     /gene_synonym="Wbscr27"
                     /coded_by="NM_001425731.1:180..803"
                     /note="isoform 2 is encoded by transcript variant 7"
                     /db_xref="GeneID:79565"
                     /db_xref="MGI:MGI:1933146"
ORIGIN      
        1 mtqeeagrlp qvlarvgtsh gitdlacklr fyddwapeyd qdvaalkyra prlavdclsr
       61 afrgsphdal ildvacgtgl vavelqargf lqvqgvdgsp emlkqararg lyhhlslctl
      121 gqeplpdpeg glvclttrtn psnlpyketl eatldslera gvweclvtqp vdhwelatse
      181 qetglgtcan dgfisgiiyl yrkqetv
//
LOCUS       NP_001231366             193 aa            linear   MAM 27-NOV-2023
DEFINITION  transforming protein RhoA [Sus scrofa].
ACCESSION   NP_001231366 XP_003358480
VERSION     NP_001231366.1
DBSOURCE    REFSEQ: accession NM_001244437.1
KEYWORDS    RefSeq.
SOURCE      Sus scrofa (pig)
  ORGANISM  Sus scrofa
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae;
            Sus.
REFERENCE   1  (residues 1 to 193)
  AUTHORS   Li XM, Wang SP, Wang JY, Tang T, Wan B, Zeng L, Wang J, Chu BB,
            Yang GY and Pan JJ.
  TITLE     RhoA suppresses pseudorabies virus replication in vitro
  JOURNAL   Virol J 20 (1), 264 (2023)
   PUBMED   37968757
  REMARK    GeneRIF: RhoA suppresses pseudorabies virus replication in vitro.
            Publication Status: Online-Only
REFERENCE   2  (residues 1 to 193)
  AUTHORS   Jacob T, Broeke CVD, Waesberghe CV, Troys LV and Favoreel HW.
  TITLE     Pseudorabies virus US3 triggers RhoA phosphorylation to reorganize
            the actin cytoskeleton
  JOURNAL   J Gen Virol 96 (8), 2328-2335 (2015)
   PUBMED   25883194
  REMARK    GeneRIF: Pseudorabies virus US3 expression led to RhoA
            phosphorylation at serine 188 to induce actin rearrangements.
REFERENCE   3  (residues 1 to 193)
  AUTHORS   Waheed F, Dan Q, Amoozadeh Y, Zhang Y, Tanimura S, Speight P, Kapus
            A and Szaszi K.
  TITLE     Central role of the exchange factor GEF-H1 in TNF-alpha-induced
            sequential activation of Rac, ADAM17/TACE, and RhoA in tubular
            epithelial cells
  JOURNAL   Mol Biol Cell 24 (7), 1068-1082 (2013)
   PUBMED   23389627
  REMARK    GeneRIF: Data indicate that TNF-alpha stimulates Rac, ADAM17/TACE,
            and RhoA through the guanine nucleotide exchange factor (GEF)-H1.
REFERENCE   4  (residues 1 to 193)
  AUTHORS   Fediuk J, Gutsol A, Nolette N and Dakshinamurti S.
  TITLE     Thromboxane-induced actin polymerization in hypoxic pulmonary
            artery is independent of Rho
  JOURNAL   Am J Physiol Lung Cell Mol Physiol 302 (1), L13-L26 (2012)
   PUBMED   21926266
  REMARK    GeneRIF: Contractile pulmonary arterial myocytes exhibit marked
            Rho-dependent actin polymerization in hypoxia, with increased
            active RhoA and LIMK phosphorylation.
REFERENCE   5  (residues 1 to 193)
  AUTHORS   Martin K, Weiss S, Metharom P, Schmeckpeper J, Hynes B, O'Sullivan
            J and Caplice N.
  TITLE     Thrombin stimulates smooth muscle cell differentiation from
            peripheral blood mononuclear cells via protease-activated
            receptor-1, RhoA, and myocardin
  JOURNAL   Circ Res 105 (3), 214-218 (2009)
   PUBMED   19574550
  REMARK    GeneRIF: Thrombin stimulates swine smooth muscle cell
            differentiation from peripheral blood mononuclear cells via
            protease-activated receptor-1, RhoA, and myocardin.
REFERENCE   6  (residues 1 to 193)
  AUTHORS   Varon C, Basoni C, Reuzeau E, Moreau V, Kramer IJ and Genot E.
  TITLE     TGFbeta1-induced aortic endothelial morphogenesis requires
            signaling by small GTPases Rac1 and RhoA
  JOURNAL   Exp Cell Res 312 (18), 3604-3619 (2006)
   PUBMED   16978608
  REMARK    GeneRIF: Results suggest that Rac1 and RhoA are regulated by
            TGFbeta1 in the process of endothelial tube formation in collagen I
            gels.
REFERENCE   7  (residues 1 to 193)
  AUTHORS   Wojciak-Stothard B, Tsang LY, Paleolog E, Hall SM and Haworth SG.
  TITLE     Rac1 and RhoA as regulators of endothelial phenotype and barrier
            function in hypoxia-induced neonatal pulmonary hypertension
  JOURNAL   Am J Physiol Lung Cell Mol Physiol 290 (6), L1173-L1182 (2006)
   PUBMED   16428270
REFERENCE   8  (residues 1 to 193)
  AUTHORS   Jorgensen FG, Hobolth A, Hornshoj H, Bendixen C, Fredholm M and
            Schierup MH.
  TITLE     Comparative analysis of protein coding sequences from human, mouse
            and the domesticated pig
  JOURNAL   BMC Biol 3, 2 (2005)
   PUBMED   15679890
  REMARK    Publication Status: Online-Only
REFERENCE   9  (residues 1 to 193)
  AUTHORS   Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H,
            Okumura N, Hamasima N and Awata T.
  TITLE     PEDE (Pig EST Data Explorer): construction of a database for ESTs
            derived from porcine full-length cDNA libraries
  JOURNAL   Nucleic Acids Res 32 (Database issue), D484-D488 (2004)
   PUBMED   14681463
REFERENCE   10 (residues 1 to 193)
  AUTHORS   Nishimura J, Sakihara C, Zhou Y and Kanaide H.
  TITLE     Expression of rho A and rho kinase mRNAs in porcine vascular smooth
            muscle
  JOURNAL   Biochem Biophys Res Commun 227 (3), 750-754 (1996)
   PUBMED   8886005
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK231928.1, EH007776.1, DB807234.1, EV970410.2 and EW113459.2.
            
            On Sep 17, 2011 this sequence version replaced XP_003358480.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA1487441,
                              SAMEA1487446 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Sus scrofa"
                     /db_xref="taxon:9823"
                     /chromosome="13"
                     /map="13"
                     /breed="Landrace"
     Protein         1..193
                     /product="transforming protein RhoA"
                     /EC_number="3.6.5.2"
                     /note="Rho A; ras homolog gene family, member A"
                     /calculated_mol_wt=21637
     Region          5..179
                     /region_name="RhoA_like"
                     /note="Ras homology family A (RhoA)-like includes RhoA,
                     RhoB and RhoC; cd01870"
                     /db_xref="CDD:206662"
     Site            order(5,34,37..38,41,43,45,54,58..59,61..63,66,68,72)
                     /site_type="other"
                     /note="GEF (guanine nucleotide exchange factor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206662"
     Site            12..19
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206662"
     Site            order(15..20,34..35,37,59..60,118,120,161..162)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206662"
     Site            order(23,25..29,42..43,45..47,52..54,163..164,168..169,
                     172)
                     /site_type="active"
                     /note="PKN/PRK1 effector interaction site [active]"
                     /db_xref="CDD:206662"
     Site            order(34,36,38..39,63..66,69,72,94)
                     /site_type="other"
                     /note="GAP (GTPase-activating protein) interaction site
                     [polypeptide binding]"
                     /db_xref="CDD:206662"
     Site            34..42
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206662"
     Site            order(37..38,61,66,68..69,71..72,75,105..106,108)
                     /site_type="other"
                     /note="GDI (guanine nucleotide dissociation inhibitor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206662"
     Site            37
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206662"
     Site            order(39,65..69,72,97,101,105)
                     /site_type="active"
                     /note="Mdia effector interaction site [active]"
                     /db_xref="CDD:206662"
     Site            order(39..40,65..66,68..69,72)
                     /site_type="other"
                     /note="Rho kinase (ROCK) effector interaction site
                     [polypeptide binding]"
                     /db_xref="CDD:206662"
     Site            59..62
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206662"
     Site            62..79
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206662"
     Site            117..120
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206662"
     Site            160..162
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206662"
     CDS             1..193
                     /gene="RHOA"
                     /coded_by="NM_001244437.1:277..858"
                     /db_xref="GeneID:396849"
                     /db_xref="VGNC:VGNC:92284"
ORIGIN      
        1 maairkklvi vgdgacgktc llivfskdqf pevyvptvfe nyvadievdg kqvelalwdt
       61 agqedydrlr plsypdtdvi lmcfsidspd slenipekwt pevkhfcpnv piilvgnkkd
      121 lrndehtrre lakmkqepvk peegrdmanr igafgymecs aktkdgvrev fematraalq
      181 arrgkkksgc lvl
//
LOCUS       NP_001006970             421 aa            linear   ROD 27-NOV-2023
DEFINITION  interferon regulatory factor 3 [Rattus norvegicus].
ACCESSION   NP_001006970 XP_214921
VERSION     NP_001006970.1
DBSOURCE    REFSEQ: accession NM_001006969.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (residues 1 to 421)
  AUTHORS   Zeng Y, Ng JPL, Wang L, Xu X, Law BYK, Chen G, Lo HH, Yang L, Yang
            J, Zhang L, Qu L, Yun X, Zhong J, Chen R, Zhang D, Wang Y, Luo W,
            Qiu C, Huang B, Liu W, Liu L and Wong VKW.
  TITLE     Mutant p53R211* ameliorates inflammatory arthritis in AIA rats via
            inhibition of TBK1-IRF3 innate immune response
  JOURNAL   Inflamm Res 72 (12), 2199-2219 (2023)
   PUBMED   37935918
  REMARK    GeneRIF: Mutant p53[R211*] ameliorates inflammatory arthritis in
            AIA rats via inhibition of TBK1-IRF3 innate immune response.
REFERENCE   2  (residues 1 to 421)
  AUTHORS   Guo H, Chen R, Li P, Yang Q and He Y.
  TITLE     ZBP1 mediates the progression of Alzheimer's disease via pyroptosis
            by regulating IRF3
  JOURNAL   Mol Cell Biochem 478 (12), 2849-2860 (2023)
   PUBMED   36964897
  REMARK    GeneRIF: ZBP1 mediates the progression of Alzheimer's disease via
            pyroptosis by regulating IRF3.
REFERENCE   3  (residues 1 to 421)
  AUTHORS   Shi C, Wang Y, Zhuang G, Qi Z, Li Y and Yin P.
  TITLE     Tumor necrosis factor-alpha-induced protein-8 like 2 regulates
            lipopolysaccharide-induced rat rheumatoid arthritis immune
            responses and is associated with Rac activation and interferon
            regulatory factor 3 phosphorylation
  JOURNAL   Mol Med Rep 16 (5), 6346-6353 (2017)
   PUBMED   28849230
  REMARK    GeneRIF: TIPE2 regulates lipopolysaccharide-induced rat rheumatoid
            arthritis immune responses and is associated with Rac1 activation
            and IRF3 phosphorylation.
REFERENCE   4  (residues 1 to 421)
  AUTHORS   Li R, Wang LG, Wang Q, Li ZH, Ma YL and Guo QD.
  TITLE     Silencing of IRF3 alleviates chronic neuropathic pain following
            chronic constriction injury
  JOURNAL   Biomed Pharmacother 88, 403-408 (2017)
   PUBMED   28122305
  REMARK    GeneRIF: knockdown of IRF3 may alleviate neuropathic pain by
            inhibiting the activation of NF-kappaB signaling pathway.
REFERENCE   5  (residues 1 to 421)
  AUTHORS   Hasan M, Gonugunta VK, Dobbs N, Ali A, Palchik G, Calvaruso MA,
            DeBerardinis RJ and Yan N.
  TITLE     Chronic innate immune activation of TBK1 suppresses mTORC1 activity
            and dysregulates cellular metabolism
  JOURNAL   Proc Natl Acad Sci U S A 114 (4), 746-751 (2017)
   PUBMED   28069950
REFERENCE   6  (residues 1 to 421)
  AUTHORS   Hoebe K, Du X, Georgel P, Janssen E, Tabeta K, Kim SO, Goode J, Lin
            P, Mann N, Mudd S, Crozat K, Sovath S, Han J and Beutler B.
  TITLE     Identification of Lps2 as a key transducer of MyD88-independent TIR
            signalling
  JOURNAL   Nature 424 (6950), 743-748 (2003)
   PUBMED   12872135
REFERENCE   7  (residues 1 to 421)
  AUTHORS   Yamamoto M, Sato S, Hemmi H, Hoshino K, Kaisho T, Sanjo H, Takeuchi
            O, Sugiyama M, Okabe M, Takeda K and Akira S.
  TITLE     Role of adaptor TRIF in the MyD88-independent toll-like receptor
            signaling pathway
  JOURNAL   Science 301 (5633), 640-643 (2003)
   PUBMED   12855817
REFERENCE   8  (residues 1 to 421)
  AUTHORS   Shinobu N, Iwamura T, Yoneyama M, Yamaguchi K, Suhara W, Fukuhara
            Y, Amano F and Fujita T.
  TITLE     Involvement of TIRAP/MAL in signaling for the activation of
            interferon regulatory factor 3 by lipopolysaccharide
  JOURNAL   FEBS Lett 517 (1-3), 251-256 (2002)
   PUBMED   12062447
REFERENCE   9  (residues 1 to 421)
  AUTHORS   Lin CH, Hare BJ, Wagner G, Harrison SC, Maniatis T and Fraenkel E.
  TITLE     A small domain of CBP/p300 binds diverse proteins: solution
            structure and functional studies
  JOURNAL   Mol Cell 8 (3), 581-590 (2001)
   PUBMED   11583620
REFERENCE   10 (residues 1 to 421)
  AUTHORS   Wathelet MG, Lin CH, Parekh BS, Ronco LV, Howley PM and Maniatis T.
  TITLE     Virus infection induces the assembly of coordinately activated
            transcription factors on the IFN-beta enhancer in vivo
  JOURNAL   Mol Cell 1 (4), 507-518 (1998)
   PUBMED   9660935
  REMARK    Erratum:[Mol Cell 1999 Jun;3(6):813]
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC083776.1.
            
            On Nov 22, 2004 this sequence version replaced XP_214921.2.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC083776.1, FQ213393.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132263
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Rattus norvegicus"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q22"
     Protein         1..421
                     /product="interferon regulatory factor 3"
                     /calculated_mol_wt=47148
     Region          7..110
                     /region_name="IRF"
                     /note="Interferon regulatory factor transcription factor;
                     pfam00605"
                     /db_xref="CDD:459863"
     Site            order(40,79,81..82,85)
                     /site_type="other"
                     /note="DNA sequence recognition sites [nucleotide
                     binding]"
                     /db_xref="CDD:238051"
     Site            order(84..85,87,90)
                     /site_type="metal-binding"
                     /db_xref="CDD:238051"
     Region          197..375
                     /region_name="IRF-3"
                     /note="Interferon-regulatory factor 3; pfam10401"
                     /db_xref="CDD:463076"
     CDS             1..421
                     /gene="Irf3"
                     /coded_by="NM_001006969.1:137..1402"
                     /db_xref="GeneID:292892"
                     /db_xref="RGD:1549774"
ORIGIN      
        1 mgtpkplilp wlvsqldlgq lkgvawldes rtkfripwkh glrqdaqmad fgifqawaea
       61 sgaytpgkdk pdlstwkrnf rsalnrkevl rlaedrskdp fdphkvyefv tpggardfvh
      121 ldtspdtngk sslsdhqedl lelldhmalg plpdegssdl piasdpsqpp lspivnnfpn
      181 papqenplrq llaeeqwefe vtafyrgrqv fqqtlfcpgg lrlvgstsdn gtlpwqpvtl
      241 pdpeefltdr lvreyvrqvl kglgkglvlw ragqclwaqr lghshsfwal geellpdsgr
      301 gpdgevpkdk ngvvfdlrpf vadliafmeg srhsprytlw fcvgeswpqd qpwvkrlvmv
      361 kvvptclkel lemareggas slktvdlhis nsqpisltsd qykaclqdlv edmdfqatge
      421 t
//
LOCUS       NP_001186890             135 aa            linear   ROD 28-NOV-2023
DEFINITION  chemokine (C-C motif) ligand 27b isoform 1 [Mus musculus].
ACCESSION   NP_001186890
VERSION     NP_001186890.1
DBSOURCE    REFSEQ: accession NM_001199961.2
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 135)
  AUTHORS   Davila ML, Xu M, Huang C, Gaddes ER, Winter L, Cantorna MT, Wang Y
            and Xiong N.
  TITLE     CCL27 is a crucial regulator of immune homeostasis of the skin and
            mucosal tissues
  JOURNAL   iScience 25 (6), 104426 (2022)
   PUBMED   35663027
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 135)
  CONSRTM   IUIS/WHO Subcommittee on Chemokine Nomenclature
  TITLE     Chemokine/chemokine receptor nomenclature
  JOURNAL   J Immunol Methods 262 (1-2), 1-3 (2002)
   PUBMED   12080938
REFERENCE   3  (residues 1 to 135)
  AUTHORS   Piao Y, Ko NT, Lim MK and Ko MS.
  TITLE     Construction of long-transcript enriched cDNA libraries from
            submicrogram amounts of total RNAs by a universal PCR amplification
            method
  JOURNAL   Genome Res 11 (9), 1553-1558 (2001)
   PUBMED   11544199
REFERENCE   4  (residues 1 to 135)
  AUTHORS   Nakano H and Gunn MD.
  TITLE     Gene duplications at the chemokine locus on mouse chromosome 4:
            multiple strain-specific haplotypes and the deletion of secondary
            lymphoid-organ chemokine and EBI-1 ligand chemokine genes in the
            plt mutation
  JOURNAL   J Immunol 166 (1), 361-369 (2001)
   PUBMED   11123313
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BX548253.32.
            
            Sequence Note:.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR17784650.902783.1,
                                           SRR17784648.698598.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849384
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 22.73 cM"
     Protein         1..135
                     /product="chemokine (C-C motif) ligand 27b isoform 1"
                     /note="small inducible cytokine A27b; chemokine (C-C
                     motif) ligand 27b"
                     /calculated_mol_wt=15643
     Region          47..107
                     /region_name="IL8"
                     /note="Small cytokines (intecrine/chemokine),
                     interleukin-8 like; pfam00048"
                     /db_xref="CDD:459650"
     CDS             1..135
                     /gene="Ccl27b"
                     /gene_synonym="Ctack; Scya27b"
                     /coded_by="NM_001199961.2:247..654"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /db_xref="GeneID:100040048"
                     /db_xref="MGI:MGI:1891389"
ORIGIN      
        1 mwrrerspms ptsqrlslea pslplrswhp wnktkqkqea lplpsstscc tqlyrqplps
       61 rllrrivhme lqeadgdchl qavvlhlarr svcvhpqnrs larwlerqgk rlqgtvpsln
      121 lvlqkkmysh pqqqn
//
LOCUS       NP_001186889             127 aa            linear   ROD 28-NOV-2023
DEFINITION  chemokine (C-C motif) ligand 27b isoform 3 [Mus musculus].
ACCESSION   NP_001186889 XP_001474048 XP_030108857
VERSION     NP_001186889.1
DBSOURCE    REFSEQ: accession NM_001199960.2
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 127)
  AUTHORS   Davila ML, Xu M, Huang C, Gaddes ER, Winter L, Cantorna MT, Wang Y
            and Xiong N.
  TITLE     CCL27 is a crucial regulator of immune homeostasis of the skin and
            mucosal tissues
  JOURNAL   iScience 25 (6), 104426 (2022)
   PUBMED   35663027
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 127)
  CONSRTM   IUIS/WHO Subcommittee on Chemokine Nomenclature
  TITLE     Chemokine/chemokine receptor nomenclature
  JOURNAL   J Immunol Methods 262 (1-2), 1-3 (2002)
   PUBMED   12080938
REFERENCE   3  (residues 1 to 127)
  AUTHORS   Piao Y, Ko NT, Lim MK and Ko MS.
  TITLE     Construction of long-transcript enriched cDNA libraries from
            submicrogram amounts of total RNAs by a universal PCR amplification
            method
  JOURNAL   Genome Res 11 (9), 1553-1558 (2001)
   PUBMED   11544199
REFERENCE   4  (residues 1 to 127)
  AUTHORS   Nakano H and Gunn MD.
  TITLE     Gene duplications at the chemokine locus on mouse chromosome 4:
            multiple strain-specific haplotypes and the deletion of secondary
            lymphoid-organ chemokine and EBI-1 ligand chemokine genes in the
            plt mutation
  JOURNAL   J Immunol 166 (1), 361-369 (2001)
   PUBMED   11123313
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BX548253.32.
            
            On or before Nov 28, 2023 this sequence version replaced
            XP_030108857.1, XP_001474048.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR17784647.697151.1,
                                           SRR7345562.2078047.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849384
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 22.73 cM"
     Protein         1..127
                     /product="chemokine (C-C motif) ligand 27b isoform 3"
                     /note="small inducible cytokine A27b; chemokine (C-C
                     motif) ligand 27b"
                     /calculated_mol_wt=14544
     Region          39..99
                     /region_name="IL8"
                     /note="Small cytokines (intecrine/chemokine),
                     interleukin-8 like; pfam00048"
                     /db_xref="CDD:459650"
     CDS             1..127
                     /gene="Ccl27b"
                     /gene_synonym="Ctack; Scya27b"
                     /coded_by="NM_001199960.2:211..594"
                     /note="isoform 3 is encoded by transcript variant 3"
                     /db_xref="GeneID:100040048"
                     /db_xref="MGI:MGI:1891389"
ORIGIN      
        1 msptsqrlsl eapslplrsw hpwnktkqkq ealplpssts cctqlyrqpl psrllrrivh
       61 melqeadgdc hlqavvlhla rrsvcvhpqn rslarwlerq gkrlqgtvps lnlvlqkkmy
      121 shpqqqn
//
LOCUS       NP_001186888             120 aa            linear   ROD 28-NOV-2023
DEFINITION  chemokine (C-C motif) ligand 27b isoform 2 precursor [Mus
            musculus].
ACCESSION   NP_001186888 XP_003085473
VERSION     NP_001186888.1
DBSOURCE    REFSEQ: accession NM_001199959.2
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 120)
  AUTHORS   Davila ML, Xu M, Huang C, Gaddes ER, Winter L, Cantorna MT, Wang Y
            and Xiong N.
  TITLE     CCL27 is a crucial regulator of immune homeostasis of the skin and
            mucosal tissues
  JOURNAL   iScience 25 (6), 104426 (2022)
   PUBMED   35663027
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 120)
  CONSRTM   IUIS/WHO Subcommittee on Chemokine Nomenclature
  TITLE     Chemokine/chemokine receptor nomenclature
  JOURNAL   J Immunol Methods 262 (1-2), 1-3 (2002)
   PUBMED   12080938
REFERENCE   3  (residues 1 to 120)
  AUTHORS   Piao Y, Ko NT, Lim MK and Ko MS.
  TITLE     Construction of long-transcript enriched cDNA libraries from
            submicrogram amounts of total RNAs by a universal PCR amplification
            method
  JOURNAL   Genome Res 11 (9), 1553-1558 (2001)
   PUBMED   11544199
REFERENCE   4  (residues 1 to 120)
  AUTHORS   Nakano H and Gunn MD.
  TITLE     Gene duplications at the chemokine locus on mouse chromosome 4:
            multiple strain-specific haplotypes and the deletion of secondary
            lymphoid-organ chemokine and EBI-1 ligand chemokine genes in the
            plt mutation
  JOURNAL   J Immunol 166 (1), 361-369 (2001)
   PUBMED   11123313
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BX548253.32.
            
            On Jan 4, 2011 this sequence version replaced XP_003085473.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BY705727.1, CF617655.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849376
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 22.73 cM"
     Protein         1..120
                     /product="chemokine (C-C motif) ligand 27b isoform 2
                     precursor"
                     /note="small inducible cytokine A27b; chemokine (C-C
                     motif) ligand 27b"
                     /calculated_mol_wt=10960
     sig_peptide     1..25
                     /inference="COORDINATES: ab initio prediction:SignalP:4.0"
                     /calculated_mol_wt=2522
     Region          32..92
                     /region_name="IL8"
                     /note="Small cytokines (intecrine/chemokine),
                     interleukin-8 like; pfam00048"
                     /db_xref="CDD:459650"
     CDS             1..120
                     /gene="Ccl27b"
                     /gene_synonym="Ctack; Scya27b"
                     /coded_by="NM_001199959.2:36..398"
                     /note="isoform 2 precursor is encoded by transcript
                     variant 2"
                     /db_xref="CCDS:CCDS51159.1"
                     /db_xref="GeneID:100040048"
                     /db_xref="MGI:MGI:1891389"
ORIGIN      
        1 mmeglspass lpllllllsp apeaalplps stscctqlyr qplpsrllrr ivhmelqead
       61 gdchlqavvl hlarrsvcvh pqnrslarwl erqgkrlqgt vpslnlvlqk kmyshpqqqn
//
LOCUS       NP_852086               4418 aa            linear   ROD 28-NOV-2023
DEFINITION  probable E3 ubiquitin-protein ligase HECTD4 [Mus musculus].
ACCESSION   NP_852086 XP_132325 XP_995545
VERSION     NP_852086.3
DBSOURCE    REFSEQ: accession NM_181421.5
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 4418)
  AUTHORS   Bedogni F and Hevner RF.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 4418)
  AUTHORS   Zaitoun I, Downs KM, Rosa GJ and Khatib H.
  TITLE     Upregulation of imprinted genes in mice: an insight into the
            intensity of gene expression and the evolution of genomic
            imprinting
  JOURNAL   Epigenetics 5 (2), 149-158 (2010)
   PUBMED   20168089
REFERENCE   3  (residues 1 to 4418)
  AUTHORS   Sharov AA, Piao Y, Matoba R, Dudekula DB, Qian Y, VanBuren V, Falco
            G, Martin PR, Stagg CA, Bassey UC, Wang Y, Carter MG, Hamatani T,
            Aiba K, Akutsu H, Sharova L, Tanaka TS, Kimber WL, Yoshikawa T,
            Jaradat SA, Pantano S, Nagaraja R, Boheler KR, Taub D, Hodes RJ,
            Longo DL, Schlessinger D, Keller J, Klotz E, Kelsoe G, Umezawa A,
            Vescovi AL, Rossant J, Kunath T, Hogan BL, Curci A, D'Urso M, Kelso
            J, Hide W and Ko MS.
  TITLE     Transcriptome analysis of mouse stem cells and early embryos
  JOURNAL   PLoS Biol 1 (3), E74 (2003)
   PUBMED   14691545
REFERENCE   4  (residues 1 to 4418)
  AUTHORS   Okazaki N, Kikuno R, Ohara R, Inamoto S, Koseki H, Hiraoka S, Saga
            Y, Nagase T, Ohara O and Koga H.
  TITLE     Prediction of the coding sequences of mouse homologues of KIAA
            gene: III. the complete nucleotide sequences of 500 mouse
            KIAA-homologous cDNAs identified by screening of terminal sequences
            of cDNA clones randomly sampled from size-fractionated libraries
  JOURNAL   DNA Res 10 (4), 167-180 (2003)
   PUBMED   14621295
REFERENCE   5  (residues 1 to 4418)
  AUTHORS   Stryke D, Kawamoto M, Huang CC, Johns SJ, King LA, Harper CA, Meng
            EC, Lee RE, Yee A, L'Italien L, Chuang PT, Young SG, Skarnes WC,
            Babbitt PC and Ferrin TE.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC110037.13 and AC126938.2.
            
            On Dec 8, 2011 this sequence version replaced NP_852086.2.
            
            Sequence Note:.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN00849375,
                              SAMN00849377 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..4418
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 61.72 cM"
     Protein         1..4418
                     /product="probable E3 ubiquitin-protein ligase HECTD4"
                     /EC_number="2.3.2.26"
                     /calculated_mol_wt=484000
     Region          2400..2555
                     /region_name="SPRY_HECT_like"
                     /note="SPRY domain in HECT E3; cd13735"
                     /db_xref="CDD:293970"
     Region          4020..4413
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cl27008"
                     /db_xref="CDD:474882"
     Site            order(4025,4065,4076,4141,4336,4380..4381,4384..4388,4408)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Site            order(4170,4173..4174,4176..4177,4180,4194,4196,
                     4200..4201,4203,4219,4224,4241,4245)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..4418
                     /gene="Hectd4"
                     /gene_synonym="A130010L24; EG545802; Gm15800; mKIAA0614"
                     /coded_by="NM_181421.5:266..13522"
                     /db_xref="CCDS:CCDS57377.1"
                     /db_xref="GeneID:269700"
                     /db_xref="MGI:MGI:3647820"
ORIGIN      
        1 mgssaaaaaa aaaaaaaads aqwlsvkeet iflhdglirv tdlaelpsei lgapeaadtd
       61 leiltfetkn ptelaerlrs vcgnqsnaya rlleyrlnal rglwnaqrql aleeqhereg
      121 sgdeetlall krqgllqqpe qapftsrvgl llvfpliqsq srtdpslcni taevllnclr
      181 dcqplsltke padclngiet llcswleets dtgrhiphkq kenaaaalva lacargslkt
      241 fvhtvhllqr qtelgslpva dvlyrlllle ggpgspscll ggkhivswgy edmlpapdsn
      301 tgsssenkda dlgrcltadg hylyttnsag rgvsklgsgl hgtlrgfvyc rneelepgwv
      361 aygnghllhr pvsfdnkphs lfqvidqntl qvcqtvpmpa splpvgstms tvhlssdgty
      421 fywiwspasl nektpkghsv fmdifelvve ngvfvanplq ertilmrkeg esaksineml
      481 lsrlsryras psatlaaltg stisntlked qaantscglp lkmlrktpmy tcgtylvmlv
      541 pppggsgssa trslfggtsg lsslkilass lvynisdgqf asradlidaa gsslgrgalv
      601 pglgacydtm nnmlwtcsnd yidqwcnpgn qafhyvcqrl gvshiitepk eeaistnevi
      661 nqllhhvgam cihqlnllat npnlpitsvl gkqhpiearh lssicdimek amvngdtciv
      721 rcilvvfqvv fkfffspqte rnrdiirrsg lllwqllmap kdqicpeiqk evclaissgl
      781 nilypgetei nnllklvlte gernsglsql rdviltnlae qlqnnrfgsd eddhyrlnde
      841 llhyilkivv rescilitkc qtvskddfqk llstvpaass clrylmavqn hllsntvlik
      901 pdenedsdss lqgetlkelk tsilalatqi ltgcdevlem lqqvttalin sdipdreqrl
      961 kgleqvtkat mlghllpvll tslmhpnlqt ltmadalmpq lvqlvlytsq talllktqcp
     1021 afaemscspc gtsdqkcrlf pdermleeke epgfltglki papwaagktv etvhpvrdny
     1081 kfketvhipg arclylrfdt rcssqydydk lviyagpntn srkvaeyggn tlgygsrsvl
     1141 gtgwpkdlvk vegdtvtfsf emrsgrehnt pdkamwgfac tvraqessed vsgglpflvd
     1201 lalglsvlac smlrilyngp eitkeeeacq dllrskllqr cqwqveangv ispaltpsps
     1261 plpltieedr eftypadvlv ppvgnyfdlp rirlppgimi klreisgrar pqfrpsikev
     1321 iqpdvmeemv vscvikhlnl vdalqslinf qyqeehaeey dllckimget fkklnamerq
     1381 lqsvaeleqk wqseaedamq gklennmpff ydyhfnenkm kelellcsmk evsfdgndle
     1441 nmvlslrekf lqevnslaqk pshplaktkt lvrslmnrae lllhvtiaaq agltrsisgt
     1501 paetpacksa setkvashav rqpvflrsms apsdlemign edleftranq rrrhvtshrs
     1561 ssftllqsla iedsrdkpty svllgqlfaf igtnpdqavs sssfllaaqt rwrrgntrkq
     1621 alvhmrellt aavrvggvth lvgpvtmvlq ggprieeltc ggmveqvqea fgetmtsvvs
     1681 lcarypiaca nsigllctip ytrseekclv rsglvqlmdr lcslssqtes sssekqtkkq
     1741 kvatmawaaf qvlanrcvew ekeeggstea vhsglarqvs slltnhlara teccgnqaag
     1801 ndalqdvlsl lndlsrshig kailsqpacv skllsllldq rpspklvlii lqlcraalpl
     1861 msvedcgnve lppwsysvps lnseqedpsd paskiaslll akladyvvpg cqtvlsptas
     1921 epdttltkts pknslkgdkd pgeeseavdg klsifihkre dqsshevlqp llsssegrpf
     1981 rlgtganmek vvkmdrdmtk ggccevitee asaalrkatk waqsglivsv gppvesinpe
     2041 tvsglstgdk kktaqtsicr ernselartd pvrpfisghv ansmaaevia llhsllmape
     2101 snaaqiwttt aekvlsralm yipqlgkyae silengsssg rklaklqria rqavaalcal
     2161 ggfketikig sevqvlgrgi sgsigvvasi neqegiatvr fppvdcrrts qaadtltipl
     2221 srlcvprsea lplhklsite kvvqavqsml lpqegslsih tslpatgdgs apvmavvrll
     2281 aeirtraclv maqlledslf ceefiqqcpa avevlnlvaq ecsagerlav vemqcerlrm
     2341 lyrdcarppp pplqadrrqp keitwspsrv fppvracmfs shltsvtfla dpsaggglpr
     2401 gtfiyatspl pvqapsfywe ieivsygdtd ddtgpivsfg fateaekrdg awtnpvgtcl
     2461 fhnngravhy ngssllqwks vrldvtlspg dvagigwert egtppppgqp akgrvyftyc
     2521 gqrltpyled vsggmwpvvh iqkkntktra nfgsrpfaya egqahrnaad lctdlaeeis
     2581 anfealpfam asdsdndagt siasdpgthg ppcriaavat aqqqydsdts chykvelsye
     2641 nfitsgpdph pppiaddesd ddddddipqe dhyallvkaw etkvfptirr rfrneaerks
     2701 gldqikgalq lgmvdiarqt veflyeengg iprdlylpti edikdeankf tidkvrkglt
     2761 vvtrspdssn vasstvgtal pkfairgmlk tfslhgvvld vdsvnelvqv etylrsegvl
     2821 vrywypidml erppagyrrt atnglvtldn tnlqihrell rceaalarly crmallnifa
     2881 pklphlftrl fhipairdit lehlqllsnq llapplpdgt issssillaq slqhcihsqs
     2941 csatdlfyqg ssqtlrewls vaitrtlhqg edslleltkq icaflqtape qfpseefpvs
     3001 eskvsmdvnf pgaafvvvsc kesqsgfrkd sslykapwar vlvyglghkv krtgqlnlie
     3061 aacyprdasp antglapppt adqypsvvls tdkvhiklgv spppgavlvl hslplefpla
     3121 mafaeqllsw ksedsdgkse depdsipasv llhvvellgn flwttdmaac vkelvfhlla
     3181 ellrtvhtle qrkhpaglss sialqlnpcl amlmalqsel hklydeetqs wvsssacggs
     3241 gaaavgdqgr fstyfhalme gclavaevtl ptnisvtasg vtstttpnls dssssssssp
     3301 gqtpqspsll skrkkvkmkr ekasssnkrq ssrasdadst vlsiggskpe dmlwfhralt
     3361 lliilrhltk kdpqglgvts daiadacqal vgptahsrll visgipthld eavvrgairk
     3421 acnahggvfk deiyiplqde dpkkpkdkae gsdskvesek llgfpsvdsl egstssslap
     3481 amsisasast sqasvcssqc vsqtasdlsv dplpsglelp vppvllephv vssqesldis
     3541 lcstgslgsl gslgepldnp etasvsdvgs mytvtsldtq platrpikgf avveirsrak
     3601 iekiraslfn nndliglssl dgedelmems teeiltvsvv nqslfdtqgs pgledyfsdk
     3661 sikgeklvpg arevlteifk scahseqtls ltpakpirvs diylskeqin sqtpgnllhl
     3721 fftnvrppkk vledqltqil rkygvpkpkl dkskyskagk eqhpvkvvst krpvtkppak
     3781 dkavlsslsr talsekkptv kpkspekskp dekdpekspt kkqevpeeky ltlegfhkfv
     3841 idrakqdirs vwrailscgy dlhfercaci dvrhaqkasr kwtlemdval vqyinrlcrh
     3901 laitparlhp hevyldpada adprmaclsn vpieslrlrf allqslnttl etfflplvel
     3961 rqtpmyahsi aallkeakgl ifydtkvtvm nrvlnatvqr tadhaapeit ldpleivgge
     4021 irasensyfc qaarqlasvp ssqlcvklas ggdptyafni rftgeevhgt sgsfrhflwq
     4081 vckelqsssl sllllcpssa vnknkgkyil tpspitygee qllhflgqll giairadvpl
     4141 pldllpsfwk tlvgepldpd qdlqeadilt ynyvkkfesi ndeselealc aeiasqhlat
     4201 espegpkpcc rftyltmtge evelcsrgrh ipvawenkdi yaaairslrl relqnmecvt
     4261 avraglgsii plqllttlsp lemelrtcgl pyinleflka htmyqvglme tdqhielfwg
     4321 alemftqeel ckfikfacnq eripftcpck dggpdtahvp pypmkiappd gtagppdsry
     4381 irvetcmfmi klpqysslet mleklrcaih yredplsg
//
LOCUS       NP_082310                407 aa            linear   ROD 28-NOV-2023
DEFINITION  putative ATP-dependent RNA helicase TDRD12 isoform 1 [Mus
            musculus].
ACCESSION   NP_082310 XP_001000417
VERSION     NP_082310.1
DBSOURCE    REFSEQ: accession NM_028034.2
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 407)
  AUTHORS   Schimenti JC and Handel MA.
  TITLE     Unpackaging the genetics of mammalian fertility: strategies to
            identify the 'reproductive genome'
  JOURNAL   Biol Reprod 99 (6), 1119-1128 (2018)
   PUBMED   29878059
  REMARK    Review article
REFERENCE   2  (residues 1 to 407)
  AUTHORS   Pandey RR, Homolka D, Olotu O, Sachidanandam R, Kotaja N and Pillai
            RS.
  TITLE     Exonuclease Domain-Containing 1 Enhances MIWI2 piRNA Biogenesis via
            Its Interaction with TDRD12
  JOURNAL   Cell Rep 24 (13), 3423-3432 (2018)
   PUBMED   30257204
REFERENCE   3  (residues 1 to 407)
  AUTHORS   Yang Z, Chen KM, Pandey RR, Homolka D, Reuter M, Janeiro BK,
            Sachidanandam R, Fauvarque MO, McCarthy AA and Pillai RS.
  TITLE     PIWI Slicing and EXD1 Drive Biogenesis of Nuclear piRNAs from
            Cytosolic Targets of the Mouse piRNA Pathway
  JOURNAL   Mol Cell 61 (1), 138-152 (2016)
   PUBMED   26669262
REFERENCE   4  (residues 1 to 407)
  AUTHORS   Pandey RR, Tokuzawa Y, Yang Z, Hayashi E, Ichisaka T, Kajita S,
            Asano Y, Kunieda T, Sachidanandam R, Chuma S, Yamanaka S and Pillai
            RS.
  TITLE     Tudor domain containing 12 (TDRD12) is essential for secondary PIWI
            interacting RNA biogenesis in mice
  JOURNAL   Proc Natl Acad Sci U S A 110 (41), 16492-16497 (2013)
   PUBMED   24067652
  REMARK    GeneRIF: Tudor domain containing 12 (TDRD12) is essential for
            secondary PIWI interacting RNA biogenesis in mice.
REFERENCE   5  (residues 1 to 407)
  AUTHORS   Asano Y, Akiyama K, Tsuji T, Takahashi S, Noguchi J and Kunieda T.
  TITLE     Characterization and linkage mapping of an ENU-induced mutant mouse
            with defective spermatogenesis
  JOURNAL   Exp Anim 58 (5), 525-532 (2009)
   PUBMED   19897936
REFERENCE   6  (residues 1 to 407)
  AUTHORS   McKee AE, Minet E, Stern C, Riahi S, Stiles CD and Silver PA.
  TITLE     A genome-wide in situ hybridization map of RNA-binding proteins
            reveals anatomically restricted expression in the developing mouse
            brain
  JOURNAL   BMC Dev Biol 5, 14 (2005)
   PUBMED   16033648
  REMARK    Publication Status: Online-Only
REFERENCE   7  (residues 1 to 407)
  AUTHORS   Mitsui K, Tokuzawa Y, Itoh H, Segawa K, Murakami M, Takahashi K,
            Maruyama M, Maeda M and Yamanaka S.
  TITLE     The homeoprotein Nanog is required for maintenance of pluripotency
            in mouse epiblast and ES cells
  JOURNAL   Cell 113 (5), 631-642 (2003)
   PUBMED   12787504
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CJ078592.1, AK010386.1 and AK010714.1.
            
            On May 4, 2006 this sequence version replaced XP_001000417.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AB211061.1, AK010386.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 21.37 cM"
     Protein         1..407
                     /product="putative ATP-dependent RNA helicase TDRD12
                     isoform 1"
                     /EC_number="3.6.4.13"
                     /note="tudor domain-containing protein 12; ES cell
                     associated transcript 8; ES cell-associated transcript 8
                     protein; putative ATP-dependent RNA helicase TDRD12"
                     /calculated_mol_wt=46388
     Region          4..165
                     /region_name="Tudor_TDRD12_rpt1"
                     /note="first Tudor domain found in Tudor domain-containing
                     protein 12 (TDRD12) and similar proteins; cd20434"
                     /db_xref="CDD:410505"
     Site            order(67,74,94,97,99)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410505"
     CDS             1..407
                     /gene="Tdrd12"
                     /gene_synonym="2410004F06Rik; 2410070K17Rik; ECAT8;
                     EG434165; G1-476-14; repro23"
                     /coded_by="NM_028034.2:208..1431"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /db_xref="CCDS:CCDS21151.1"
                     /db_xref="GeneID:71981"
                     /db_xref="MGI:MGI:1919231"
ORIGIN      
        1 mfevlvlkie dpgcfwviik gcshfleqev dyqklntamn dfynsmcqdv emkplmleeg
       61 qvcvvycqel kcwcraliks iissadhyla ecflvdfaky ipvksknirv avesfmqlpy
      121 rakkfrlygt kpvtlhidfc ednaeivpat kwdsaaiqyf qnllrattqv eaklcaveed
      181 tfevylyati knekvcvndd lvaknfayyv spmgnknlnp lekprqslns vtcssklsps
      241 ltlwpmllqg kdyhrmenka lnykdsltds pkmmlekqqq slplkhtekc tessvywptk
      301 rgitiyadpd vpsvsgssqr pnekplrlte kkdcdekngc vkllqflnpd plradgtsdl
      361 hqlqkvklgt lqpgvvlrnr iepcltleks plsadlkkvn mflkpds
//
LOCUS       NP_001355316            1277 aa            linear   ROD 28-NOV-2023
DEFINITION  putative ATP-dependent RNA helicase TDRD12 isoform 2 [Mus
            musculus].
ACCESSION   NP_001355316 XP_011249000
VERSION     NP_001355316.1
DBSOURCE    REFSEQ: accession NM_001368387.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 1277)
  AUTHORS   Schimenti JC and Handel MA.
  TITLE     Unpackaging the genetics of mammalian fertility: strategies to
            identify the 'reproductive genome'
  JOURNAL   Biol Reprod 99 (6), 1119-1128 (2018)
   PUBMED   29878059
  REMARK    Review article
REFERENCE   2  (residues 1 to 1277)
  AUTHORS   Pandey RR, Homolka D, Olotu O, Sachidanandam R, Kotaja N and Pillai
            RS.
  TITLE     Exonuclease Domain-Containing 1 Enhances MIWI2 piRNA Biogenesis via
            Its Interaction with TDRD12
  JOURNAL   Cell Rep 24 (13), 3423-3432 (2018)
   PUBMED   30257204
REFERENCE   3  (residues 1 to 1277)
  AUTHORS   Yang Z, Chen KM, Pandey RR, Homolka D, Reuter M, Janeiro BK,
            Sachidanandam R, Fauvarque MO, McCarthy AA and Pillai RS.
  TITLE     PIWI Slicing and EXD1 Drive Biogenesis of Nuclear piRNAs from
            Cytosolic Targets of the Mouse piRNA Pathway
  JOURNAL   Mol Cell 61 (1), 138-152 (2016)
   PUBMED   26669262
REFERENCE   4  (residues 1 to 1277)
  AUTHORS   Pandey RR, Tokuzawa Y, Yang Z, Hayashi E, Ichisaka T, Kajita S,
            Asano Y, Kunieda T, Sachidanandam R, Chuma S, Yamanaka S and Pillai
            RS.
  TITLE     Tudor domain containing 12 (TDRD12) is essential for secondary PIWI
            interacting RNA biogenesis in mice
  JOURNAL   Proc Natl Acad Sci U S A 110 (41), 16492-16497 (2013)
   PUBMED   24067652
  REMARK    GeneRIF: Tudor domain containing 12 (TDRD12) is essential for
            secondary PIWI interacting RNA biogenesis in mice.
REFERENCE   5  (residues 1 to 1277)
  AUTHORS   Asano Y, Akiyama K, Tsuji T, Takahashi S, Noguchi J and Kunieda T.
  TITLE     Characterization and linkage mapping of an ENU-induced mutant mouse
            with defective spermatogenesis
  JOURNAL   Exp Anim 58 (5), 525-532 (2009)
   PUBMED   19897936
REFERENCE   6  (residues 1 to 1277)
  AUTHORS   McKee AE, Minet E, Stern C, Riahi S, Stiles CD and Silver PA.
  TITLE     A genome-wide in situ hybridization map of RNA-binding proteins
            reveals anatomically restricted expression in the developing mouse
            brain
  JOURNAL   BMC Dev Biol 5, 14 (2005)
   PUBMED   16033648
  REMARK    Publication Status: Online-Only
REFERENCE   7  (residues 1 to 1277)
  AUTHORS   Mitsui K, Tokuzawa Y, Itoh H, Segawa K, Murakami M, Takahashi K,
            Maruyama M, Maeda M and Yamanaka S.
  TITLE     The homeoprotein Nanog is required for maintenance of pluripotency
            in mouse epiblast and ES cells
  JOURNAL   Cell 113 (5), 631-642 (2003)
   PUBMED   12787504
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC151535.2.
            
            On Feb 9, 2019 this sequence version replaced XP_011249000.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMN00849374, SAMN00849375
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on conservation, expression,
                                         longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1277
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 21.37 cM"
     Protein         1..1277
                     /product="putative ATP-dependent RNA helicase TDRD12
                     isoform 2"
                     /EC_number="3.6.4.13"
                     /note="tudor domain-containing protein 12; ES cell
                     associated transcript 8; ES cell-associated transcript 8
                     protein; putative ATP-dependent RNA helicase TDRD12"
                     /calculated_mol_wt=144453
     Region          4..165
                     /region_name="Tudor_TDRD12_rpt1"
                     /note="first Tudor domain found in Tudor domain-containing
                     protein 12 (TDRD12) and similar proteins; cd20434"
                     /db_xref="CDD:410505"
     Site            order(67,74,94,97,99)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410505"
     Region          396..601
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Region          <507..810
                     /region_name="SrmB"
                     /note="Superfamily II DNA and RNA helicase [Replication,
                     recombination and repair]; COG0513"
                     /db_xref="CDD:440279"
     Region          863..985
                     /region_name="Tudor_TDRD12_rpt2"
                     /note="second Tudor domain found in Tudor
                     domain-containing protein 12 (TDRD12) and similar
                     proteins; cd20435"
                     /db_xref="CDD:410506"
     Site            order(913,917,940,943,945)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410506"
     Region          1138..1242
                     /region_name="alpha-crystallin domain (ACD) found in
                     alpha-crystallin-type small heat shock proteins, and a
                     similar domain found in p23 (a cochaperone for Hsp90) and
                     in other p23-like proteins."
                     /note="The alpha-crystallin-Hsps_p23-like superfamily
                     includes the alpha-crystallin domain (ACD) of
                     alpha-crystallin-type small heat shock proteins (sHsps)
                     and a similar domain found in p23-like proteins. sHsps are
                     small stress induced proteins with monomeric...; cl00175"
                     /db_xref="CDD:469641"
     CDS             1..1277
                     /gene="Tdrd12"
                     /gene_synonym="2410004F06Rik; 2410070K17Rik; ECAT8;
                     EG434165; G1-476-14; repro23"
                     /coded_by="NM_001368387.1:179..4012"
                     /note="isoform 2 is encoded by transcript variant 2"
                     /db_xref="GeneID:71981"
                     /db_xref="MGI:MGI:1919231"
ORIGIN      
        1 mfevlvlkie dpgcfwviik gcshfleqev dyqklntamn dfynsmcqdv emkplmleeg
       61 qvcvvycqel kcwcraliks iissadhyla ecflvdfaky ipvksknirv avesfmqlpy
      121 rakkfrlygt kpvtlhidfc ednaeivpat kwdsaaiqyf qnllrattqv eaklcaveed
      181 tfevylyati knekvcvndd lvaknfayyv spmgnknlnp lekprqslns vtcssklsps
      241 ltlwpmllqg kdyhrmenka lnykdsltds pkmmlekqqq slplkhtekc tessvywptk
      301 rgitiyadpd vpsvsgssqr pnekplrlte kkdcdekngc vkllqflnpd plradgtsdl
      361 hqlqkvklgt lqpgvvlrnr iepcltleks plsadlkkal qrnkfpgpsh tasyswppia
      421 rgcdmvvish cgndpllylp plltilqmgg cykslpsrng plavivcpgw kkaqfifell
      481 gdysmssrpl hpvlltiglh kdeaknmklp rgcdvivttp hsllrlltyr sllflrlchl
      541 vldevhmlff eaneqmfail dnfkknveve eresaphqiv avgvhwnkhi dhlvrefmkd
      601 pcvvitalee aalygsvqqv vhlclecekt stllqvldfv psqaqktlif tcsvaetetv
      661 ckvvesnsif clkmhkemaf nlksileqwk kklspgshiv ltltddcipl laitdatcvv
      721 hfsfpsspkv lggrlycmsd hfqslteqgs paeqgdkktk svlllterna shavgilryl
      781 eradakipse lyeftagvle akedkkarrp lcpylkafgf ckdkricpdr hhinpemdip
      841 rklsnktlpv fghirvipfy isnatnyfgr iidkhvdlye tlnaemneyf kessnktsae
      901 kvenlglygl eektlfqrvq vlevsqkedt wglgsilvkl idegrtklit rdqllllpek
      961 fhtlppqave fivcrvkpad seiewnpkvt ryihhkivgk mhdakvvlal gntlwidpmv
     1021 hvtklsnlkt siidynvrae ilsmgmgidn sehleqlkkl ykeaklpafe dlpcqtsipt
     1081 tvedtvclqg tqqgdggter gagsqedsdn qkpgvlsedi gsetissapq phgrsfhpqi
     1141 kwfqkddvvi lkikirnvkd ykckfftdrv ifsawvgdkf yladlelqgd irkddckcii
     1201 kddeplitla kekqecwcgl lkqrnpnvaf dfdhweecee dspfskvvns knlsckvaal
     1261 aessgsssdt tdgsese
//
LOCUS       NP_077132                113 aa            linear   ROD 28-NOV-2023
DEFINITION  mammalian retrotransposon derived 8b [Mus musculus].
ACCESSION   NP_077132
VERSION     NP_077132.1
DBSOURCE    REFSEQ: accession NM_024170.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 113)
  AUTHORS   Mohan HM, Trzeciakiewicz H, Pithadia A, Crowley EV, Pacitto R,
            Safren N, Trotter B, Zhang C, Zhou X, Zhang Y, Basrur V, Paulson HL
            and Sharkey LM.
  TITLE     RTL8 promotes nuclear localization of UBQLN2 to subnuclear
            compartments associated with protein quality control
  JOURNAL   Cell Mol Life Sci 79 (3), 176 (2022)
   PUBMED   35247097
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 113)
  AUTHORS   Bedogni F and Hevner RF.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 113)
  AUTHORS   Brandt J, Veith AM and Volff JN.
  TITLE     A family of neofunctionalized Ty3/gypsy retrotransposon genes in
            mammalian genomes
  JOURNAL   Cytogenet Genome Res 110 (1-4), 307-317 (2005)
   PUBMED   16093683
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL807398.8.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC003436.1, BE626696.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 29.87 cM"
     Protein         1..113
                     /product="mammalian retrotransposon derived 8b"
                     /note="CAAX box 1 homolog A; CAAX box 1A"
                     /calculated_mol_wt=13470
     Region          <26..113
                     /region_name="Retrotrans_gag"
                     /note="Retrotransposon gag protein; cl46289"
                     /db_xref="CDD:480629"
     CDS             1..113
                     /gene="Rtl8a"
                     /gene_synonym="1110012O05Rik; Cxx1a; Mar8.2A/B; Mart8b"
                     /coded_by="NM_024170.2:143..484"
                     /db_xref="CCDS:CCDS30134.1"
                     /db_xref="GeneID:66158"
                     /db_xref="MGI:MGI:1913408"
ORIGIN      
        1 megqgkvkrp kaymlrhnrr rrrrnpipfp elfdgemdkl pefivqtgsy mlvddrtfdt
       61 delkvtflit rlkgralqwv ipyikidspl lndyngflne mkrvfgweed edf
//
LOCUS       NP_033152                387 aa            linear   ROD 28-NOV-2023
DEFINITION  serine peptidase inhibitor, clade B, member 3A [Mus musculus].
ACCESSION   NP_033152 XP_484905
VERSION     NP_033152.3
DBSOURCE    REFSEQ: accession NM_009126.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 387)
  AUTHORS   Qiu T, Huteckova B, Seppala M, Cobourne MT, Chen Z, Hovorakova M,
            Buchtova M and Tucker AS.
  TITLE     Molecular profiling of the vestibular lamina highlights a key role
            for Hedgehog signalling
  JOURNAL   Development 150 (7) (2023)
   PUBMED   36971701
REFERENCE   2  (residues 1 to 387)
  AUTHORS   Novo E, Cappon A, Villano G, Quarta S, Cannito S, Bocca C, Turato
            C, Guido M, Maggiora M, Protopapa F, Sutti S, Provera A, Ruvoletto
            M, Biasiolo A, Foglia B, Albano E, Pontisso P and Parola M.
  TITLE     SerpinB3 as a Pro-Inflammatory Mediator in the Progression of
            Experimental Non-Alcoholic Fatty Liver Disease
  JOURNAL   Front Immunol 13, 910526 (2022)
   PUBMED   35874657
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 387)
  AUTHORS   Luke CJ, Markovina S, Good M, Wight IE, Thomas BJ, Linneman JM,
            Lanik WE, Koroleva O, Coffman MR, Miedel MT, Gong Q, Andress A,
            Campos Guerrero M, Wang S, Chen L, Beatty WL, Hausmann KN, White
            FV, Fitzpatrick JAJ, Orvedahl A, Pak SC and Silverman GA.
  TITLE     Lysoptosis is an evolutionarily conserved cell death pathway
            moderated by intracellular serpins
  JOURNAL   Commun Biol 5 (1), 47 (2022)
   PUBMED   35022507
  REMARK    GeneRIF: Lysoptosis is an evolutionarily conserved cell death
            pathway moderated by intracellular serpins.
            Publication Status: Online-Only
REFERENCE   4  (residues 1 to 387)
  AUTHORS   Zieman AG, Poll BG, Ma J and Coulombe PA.
  TITLE     Altered keratinocyte differentiation is an early driver of keratin
            mutation-based palmoplantar keratoderma
  JOURNAL   Hum Mol Genet 28 (13), 2255-2270 (2019)
   PUBMED   31220272
REFERENCE   5  (residues 1 to 387)
  AUTHORS   Sivaprasad U, Kinker KG, Ericksen MB, Lindsey M, Gibson AM, Bass
            SA, Hershey NS, Deng J, Medvedovic M and Khurana Hershey GK.
  TITLE     SERPINB3/B4 contributes to early inflammation and barrier
            dysfunction in an experimental murine model of atopic dermatitis
  JOURNAL   J Invest Dermatol 135 (1), 160-169 (2015)
   PUBMED   25111616
  REMARK    GeneRIF: Serpinb3a deficiency attenuates barrier dysfunction and
            the early inflammatory response following cutaneous allergen
            exposure, supporting a role for Serpinb3a (mice) and SERPINB3/B4
            (humans) early in atopic dermatitis.
REFERENCE   6  (residues 1 to 387)
  AUTHORS   Sakata Y, Arima K, Takeshita K, Takai T, Aoki S, Ogawa H, Sugihara
            H, Fujimoto K and Izuhara K.
  TITLE     Characterization of novel squamous cell carcinoma antigen-related
            molecules in mice
  JOURNAL   Biochem Biophys Res Commun 324 (4), 1340-1345 (2004)
   PUBMED   15504361
  REMARK    GeneRIF: Characerization of the functional properties of Serpinb3c.
REFERENCE   7  (residues 1 to 387)
  AUTHORS   Askew DJ, Askew YS, Kato Y, Turner RF, Dewar K, Lehoczky J and
            Silverman GA.
  TITLE     Comparative genomic analysis of the clade B serpin cluster at human
            chromosome 18q21: amplification within the mouse squamous cell
            carcinoma antigen gene locus
  JOURNAL   Genomics 84 (1), 176-184 (2004)
   PUBMED   15203215
REFERENCE   8  (residues 1 to 387)
  AUTHORS   Gariboldi M, Peissel B, Fabbri A, Saran A, Zaffaroni D, Falvella
            FS, Spinola M, Tanuma J, Pazzaglia S, Mancuso MT, Maurichi A,
            Bartoli C, Cataltepe S, Silverman GA, Pilotti S, Hayashizaki Y,
            Okazaki Y and Dragani TA.
  TITLE     SCCA2-like serpins mediate genetic predisposition to skin tumors
  JOURNAL   Cancer Res 63 (8), 1871-1875 (2003)
   PUBMED   12702576
  REMARK    GeneRIF: SCCA2-like serpins mediate genetic predisposition to skin
            cancer in a mouse model and in humans.
REFERENCE   9  (residues 1 to 387)
  AUTHORS   Al-Khunaizi M, Luke CJ, Askew YS, Pak SC, Askew DJ, Cataltepe S,
            Miller D, Mills DR, Tsu C, Bromme D, Irving JA, Whisstock JC and
            Silverman GA.
  TITLE     The serpin SQN-5 is a dual mechanistic-class inhibitor of serine
            and cysteine proteinases
  JOURNAL   Biochemistry 41 (9), 3189-3199 (2002)
   PUBMED   11863458
  REMARK    GeneRIF: SQN-5 employed different reactive centers to neutralize
            the serine and cysteine proteinases.
REFERENCE   10 (residues 1 to 387)
  AUTHORS   Bartuski AJ, Kamachi Y, Schick C, Massa H, Trask BJ and Silverman
            GA.
  TITLE     A murine ortholog of the human serpin SCCA2 maps to chromosome 1
            and inhibits chymotrypsin-like serine proteinases
  JOURNAL   Genomics 54 (2), 297-306 (1998)
   PUBMED   9828132
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC063756.1, AC125111.3 and BB699605.1.
            
            On Apr 18, 2009 this sequence version replaced NP_033152.2.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC063756.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849387 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 50.34 cM"
     Protein         1..387
                     /product="serine peptidase inhibitor, clade B, member 3A"
                     /note="serine (or cysteine) proteinase inhibitor, clade B
                     (ovalbumin), member 3A; squamous cell carcinoma antigen 2"
                     /calculated_mol_wt=44322
     Region          1..387
                     /region_name="serpin"
                     /note="SERine Proteinase INhibitors (serpin) family;
                     cl38926"
                     /db_xref="CDD:476815"
     Site            order(338..348,365)
                     /site_type="other"
                     /note="reactive center loop (RCL)"
                     /db_xref="CDD:381000"
     CDS             1..387
                     /gene="Serpinb3a"
                     /gene_synonym="1110001H02Rik; 1110013A16Rik; Scca2;
                     Serpinb4; Sqn5"
                     /coded_by="NM_009126.3:37..1200"
                     /db_xref="CCDS:CCDS15214.1"
                     /db_xref="GeneID:20248"
                     /db_xref="MGI:MGI:3573933"
ORIGIN      
        1 mhlfaeattk ftlelyrqlr esdnnifysp ismmtalaml qlgakgntek qiekvlqfne
       61 ttkktteksa hchdeenvhe qfqklmtqln ksndaydlka ansiygakgf pfvqtfledi
      121 keyyqanves ldfehaaees ekkinswves qtngkikdlf pngslnrsti mvlvnavyfk
      181 gqwnhkfdek htteekfwln kntskpvqmm kqniefnfmf ledvqakive ipykgkelsm
      241 ivllpveing lkqleeqlta dkllewtrae nmhmtelyls lprfkvdeky dlpiplehmg
      301 mvdafdpqka dfsgmsstqg lvvskvlhks fvevneegte aaaatgvevs ltsaqiaedf
      361 ccdhpflffi ihrktnsilf fgrissp
//
LOCUS       NP_997150                 80 aa            linear   ROD 28-NOV-2023
DEFINITION  Tmsb15b1-Tmsb15b2 protein [Mus musculus].
ACCESSION   NP_997150
VERSION     NP_997150.1
DBSOURCE    REFSEQ: accession NM_207267.4
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 80)
  AUTHORS   Bedogni F and Hevner RF.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 80)
  AUTHORS   Dhaese S, Vandepoele K, Waterschoot D, Vanloo B, Vandekerckhove J,
            Ampe C and Van Troys M.
  TITLE     The mouse thymosin beta15 gene family displays unique complexity
            and encodes a functional thymosin repeat
  JOURNAL   J Mol Biol 387 (4), 809-825 (2009)
   PUBMED   19233202
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL672008.8 and BE625563.1.
            
            Summary: This record represents readthrough transcripts derived
            from two adjacent genes, represented by GeneIDs 100034363 and
            666244. Each gene has three exons. The readthrough transcripts
            include two exons from each gene, such that the second exon is
            represented twice, although not identically, in the readthrough
            transcripts. [provided by RefSeq, Jul 2008].
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##RefSeq-Attributes-START##
            readthrough transcript :: includes exons from GeneID 666244,
                                      100034363
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..80
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 59.1 cM"
     Protein         1..80
                     /product="Tmsb15b1-Tmsb15b2 protein"
                     /note="Tmsb15b1-Tmsb15b2 readthrough transcript"
                     /calculated_mol_wt=9094
     Region          3..39
                     /region_name="Thymosin"
                     /note="Thymosin beta-4 family; cl27586"
                     /db_xref="CDD:421525"
     Region          38..76
                     /region_name="Thymosin"
                     /note="Thymosin beta-4 family; pfam01290"
                     /db_xref="CDD:396038"
     CDS             1..80
                     /gene="Tmsb15l"
                     /gene_synonym="4930488E11Rik; Tb15r; Tmsb15b1-Tmsb15b2;
                     Tmsb15r"
                     /coded_by="NM_207267.4:122..364"
                     /db_xref="GeneID:399591"
                     /db_xref="MGI:MGI:3026988"
ORIGIN      
        1 msdkpdlsev etfdksklkk tntevkntlp snenkmsdkp dlsevetfdk aklkktntev
       61 kntlpsketi qqekehnert
//
LOCUS       NP_997128                561 aa            linear   ROD 29-NOV-2023
DEFINITION  zinc finger protein 870 isoform 2 [Mus musculus].
ACCESSION   NP_997128 XP_139874
VERSION     NP_997128.1
DBSOURCE    REFSEQ: accession NM_207245.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 561)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CT033772.6.
            
            On Aug 30, 2004 this sequence version replaced XP_139874.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC066107.1, SRR9219381.135871.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164138, SAMN01164142
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 17.98 cM"
     Protein         1..561
                     /product="zinc finger protein 870 isoform 2"
                     /calculated_mol_wt=63904
     Region          3..44
                     /region_name="KRAB"
                     /note="KRAB box; pfam01352"
                     /db_xref="CDD:460171"
     Region          199..216
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          209..233
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          224..244
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          280..300
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          292..316
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          308..328
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          336..356
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <360..548
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          364..384
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(369,371,373,375..376,379..380,383,397,399,403..404,
                     407..408,411,425,427,429,431..432,435..436,439)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          392..412
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          420..440
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          448..468
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          476..496
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          504..524
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          532..552
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..561
                     /gene="Zfp870"
                     /coded_by="NM_207245.3:186..1871"
                     /note="isoform 2 is encoded by transcript variant 2"
                     /db_xref="CCDS:CCDS89069.1"
                     /db_xref="GeneID:240066"
                     /db_xref="MGI:MGI:3029586"
ORIGIN      
        1 mesvsfedva vkftqeewav ldpsqkklyk dvmqetlknl asignksgkq kvineygklw
       61 rklsshlagk fsdynenhqc adifncspgh svslqscpgr atfeknlcee grighsslgv
      121 plnhlvgpye dqehgqplyk hkefesssns lslqmhtnth tgekpsknkg feedlpcvrs
      181 gqtykqndys kksyvhrpcg kgfthpsplq rhekshsvkk pyvcelcgkg farfgnllrh
      241 qrtdtgekif lpghyartlp rsaclrrrts vrngekpyvc eqcgktflds tyfrihrrih
      301 tgvkpyvckq cgkaftasry lrshelthtr eksyvcelcg gaftfwyqfq khkvahsgvn
      361 pyvckqcgkg fpyssslkth erihtgqkpy vckhcgktfg ssgnlkrhgs thtgerlyic
      421 kqcgksfnnh ssfqfhnrmh tganpykckq cgkdlassss lqshernhsg ekpyaclqcg
      481 kafssdsslr khkimhseek pyvckhcgks frrffevrvh erihsserpy ecetcgrgfl
      541 ssthlrrhvp ihsraekdas k
//
LOCUS       NP_001412857             563 aa            linear   ROD 29-NOV-2023
DEFINITION  zinc finger protein 870 isoform 1 [Mus musculus].
ACCESSION   NP_001412857 XP_006524315
VERSION     NP_001412857.1
DBSOURCE    REFSEQ: accession NM_001425928.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 563)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CT033772.6.
            
            On Nov 29, 2023 this sequence version replaced XP_006524315.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR10223970.19174.1,
                                           SRR9219382.220393.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164138, SAMN01164142
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 17.98 cM"
     Protein         1..563
                     /product="zinc finger protein 870 isoform 1"
                     /calculated_mol_wt=64163
     Region          5..46
                     /region_name="KRAB"
                     /note="KRAB box; pfam01352"
                     /db_xref="CDD:460171"
     Region          201..218
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          211..235
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          226..246
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          282..302
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          294..318
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          310..330
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          338..358
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <362..550
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          366..386
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(371,373,375,377..378,381..382,385,399,401,405..406,
                     409..410,413,427,429,431,433..434,437..438,441)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          394..414
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          422..442
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          450..470
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          478..498
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          506..526
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          534..554
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..563
                     /gene="Zfp870"
                     /coded_by="NM_001425928.1:505..2196"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /db_xref="GeneID:240066"
                     /db_xref="MGI:MGI:3029586"
ORIGIN      
        1 mmkesvsfed vavkftqeew avldpsqkkl ykdvmqetlk nlasignksg kqkvineygk
       61 lwrklsshla gkfsdynenh qcadifncsp ghsvslqscp gratfeknlc eegrighssl
      121 gvplnhlvgp yedqehgqpl ykhkefesss nslslqmhtn thtgekpskn kgfeedlpcv
      181 rsgqtykqnd yskksyvhrp cgkgfthpsp lqrhekshsv kkpyvcelcg kgfarfgnll
      241 rhqrtdtgek iflpghyart lprsaclrrr tsvrngekpy vceqcgktfl dstyfrihrr
      301 ihtgvkpyvc kqcgkaftas rylrshelth treksyvcel cggaftfwyq fqkhkvahsg
      361 vnpyvckqcg kgfpyssslk therihtgqk pyvckhcgkt fgssgnlkrh gsthtgerly
      421 ickqcgksfn nhssfqfhnr mhtganpykc kqcgkdlass sslqshernh sgekpyaclq
      481 cgkafssdss lrkhkimhse ekpyvckhcg ksfrrffevr vherihsser pyecetcgrg
      541 flssthlrrh vpihsraekd ask
//
LOCUS       XP_060994170             454 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box/WD repeat-containing protein 2-like [Dama dama].
ACCESSION   XP_060994170
VERSION     XP_060994170.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138187.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870875) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..454
                     /product="F-box/WD repeat-containing protein 2-like"
                     /calculated_mol_wt=51209
     Region          55..94
                     /region_name="F-box_FBXW2"
                     /note="F-box domain found in F-box/WD repeat-containing
                     protein 2 (FBXW2) and similar proteins; cd22131"
                     /db_xref="CDD:438903"
     Site            order(60,64,67..68,71..72,76,78..79,83..85,87)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438903"
     Region          140..447
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(147,163,167,173..174,186..187,201,205,211..212,
                     224..225,242,247,253..254,267,294,297,304..305,320..321,
                     340,344,350..351,362,379,384,390..391,418..419,437,442)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          151..185
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          188..223
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          229..265
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          281..319
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          327..362
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          377..417
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          423..445
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..454
                     /gene="LOC133053670"
                     /coded_by="XM_061138187.1:22..1386"
                     /db_xref="GeneID:133053670"
ORIGIN      
        1 merkdfetwl dnisvtflsl tdlqknetld hlislsgavq lrhlsnnlet llkrdfltll
       61 plelsfyllk wldpqtlltc clvskqwnkv isactevwqt acknlgwqid dsvqdalhwk
      121 kvylkailrm kqledheafe tsslighsar vyalyykdgl lctgsddlsa klwdvstgqc
      181 vygiqthtca avkfdeqklv tgsfdntvac wewssgartq hfrghtgavf svdyndeldv
      241 lvsgsadftv kvwalsagtc lntltghtew vtkvvlqkck vksllhspgd yillsadkye
      301 ikiwpigrei nckclktlsv sedrsiclqp rlhfdgkyiv cssalglyqw dfasydilrv
      361 iktpeianla llgfgdifal lfdncylyil dlpteslisr wplpeyrksk rgssflagea
      421 swlngldghn dtglvfatsm pdhsihlvlw kqhg
//
LOCUS       XP_060994172             363 aa            linear   MAM 02-DEC-2023
DEFINITION  cyclin-Y-like protein 1 isoform X1 [Dama dama].
ACCESSION   XP_060994172
VERSION     XP_060994172.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138189.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870878) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..363
                     /product="cyclin-Y-like protein 1 isoform X1"
                     /calculated_mol_wt=40916
     Region          188..284
                     /region_name="CYCLIN_CCNY_like"
                     /note="cyclin box found in cyclin-Y (CCNY) family;
                     cd20540"
                     /db_xref="CDD:410243"
     CDS             1..363
                     /gene="LOC133053672"
                     /coded_by="XM_061138189.1:172..1263"
                     /db_xref="GeneID:133053672"
ORIGIN      
        1 mgntltccvc pnaspklgrr agpaepdyef evyeaaagda vavapapaav epteldfrag
       61 eghhlqhisd rempedlale snpsdhpras tiflsksqtd vqekrksnhl nhvspgqltk
      121 kysscptvfl ddstvsqpnl rttikcvila iyyhiknrda nksldifder shpltrervp
      181 eeyfkhdpeh kfiyrfvhtl fsaaqltaec aivtlvyler lltyaeidic ptnwkrivlg
      241 aillaskvwd dqavwnvdys qilkditved mnemerhfle llqfninvsa svyakyyfdl
      301 csladdnnls fliaplsker aqsleaisrl cedkykdlgr vavrrsfsad nfigiqrsna
      361 ils
//
LOCUS       XP_060994173             312 aa            linear   MAM 02-DEC-2023
DEFINITION  cyclin-Y-like protein 1 isoform X2 [Dama dama].
ACCESSION   XP_060994173
VERSION     XP_060994173.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138190.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870878) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..312
                     /product="cyclin-Y-like protein 1 isoform X2"
                     /calculated_mol_wt=35173
     Region          137..233
                     /region_name="CYCLIN_CCNY_like"
                     /note="cyclin box found in cyclin-Y (CCNY) family;
                     cd20540"
                     /db_xref="CDD:410243"
     CDS             1..312
                     /gene="LOC133053672"
                     /coded_by="XM_061138190.1:174..1112"
                     /db_xref="GeneID:133053672"
ORIGIN      
        1 mgntltccvc pnaspklgrr agpaepdyef evyeaaagda vavapapaav epteldfrag
       61 eghhlqhisd rempedlale snpsdhpras tiflsksqtd vqekrksnhl nhcdlsnilp
      121 hkeqrervpe eyfkhdpehk fiyrfvhtlf saaqltaeca ivtlvylerl ltyaeidicp
      181 tnwkrivlga illaskvwdd qavwnvdysq ilkditvedm nemerhflel lqfninvsas
      241 vyakyyfdlc sladdnnlsf liaplskera qsleaisrlc edkykdlgrv avrrsfsadn
      301 figiqrsnai ls
//
LOCUS       XP_060994174             365 aa            linear   MAM 02-DEC-2023
DEFINITION  cyclin-Y-like protein 1 isoform X1 [Dama dama].
ACCESSION   XP_060994174
VERSION     XP_060994174.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138191.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870879) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..365
                     /product="cyclin-Y-like protein 1 isoform X1"
                     /calculated_mol_wt=41188
     Region          190..286
                     /region_name="CYCLIN_CCNY_like"
                     /note="cyclin box found in cyclin-Y (CCNY) family;
                     cd20540"
                     /db_xref="CDD:410243"
     CDS             1..365
                     /gene="LOC133053673"
                     /coded_by="XM_061138191.1:187..1284"
                     /db_xref="GeneID:133053673"
ORIGIN      
        1 mgntltccls pnaspklgrr agpaepdyes evyeaaagda vavapapapa avepteldfr
       61 ageghhlqhi sdrempedla lesnpsdhpr astiflsksq tdvrekrksn hlnhvpsgql
      121 tkkyslcpti flddstvsqp nlrttikcvi laiyyhiknr danrsldifd ershpltrer
      181 vpeeylkhdp ehkfiyrfvh tlfsaaqltd ecaivtlvyl erlltyaeid icptnwkriv
      241 wgavllaskv wddqavwnvd ysqilkditv edmnemerhf lellqfninv sasvyakyyf
      301 dlcsladdnn lsfliaplsk eraqsleais rlcedkykdl grvavrrsfs adnfigiqrs
      361 nails
//
LOCUS       XP_060994175             252 aa            linear   MAM 02-DEC-2023
DEFINITION  cyclin-Y-like protein 1 isoform X2 [Dama dama].
ACCESSION   XP_060994175
VERSION     XP_060994175.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138192.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870879) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..252
                     /product="cyclin-Y-like protein 1 isoform X2"
                     /calculated_mol_wt=29083
     Region          77..173
                     /region_name="CYCLIN_CCNY_like"
                     /note="cyclin box found in cyclin-Y (CCNY) family;
                     cd20540"
                     /db_xref="CDD:410243"
     CDS             1..252
                     /gene="LOC133053673"
                     /coded_by="XM_061138192.1:48..806"
                     /db_xref="GeneID:133053673"
ORIGIN      
        1 mvpsgqltkk yslcptifld dstvsqpnlr ttikcvilai yyhiknrdan rsldifders
       61 hpltrervpe eylkhdpehk fiyrfvhtlf saaqltdeca ivtlvylerl ltyaeidicp
      121 tnwkrivwga vllaskvwdd qavwnvdysq ilkditvedm nemerhflel lqfninvsas
      181 vyakyyfdlc sladdnnlsf liaplskera qsleaisrlc edkykdlgrv avrrsfsadn
      241 figiqrsnai ls
//
LOCUS       XP_060994176             314 aa            linear   MAM 02-DEC-2023
DEFINITION  cyclin-Y-like protein 1 isoform X3 [Dama dama].
ACCESSION   XP_060994176
VERSION     XP_060994176.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138193.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870879) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..314
                     /product="cyclin-Y-like protein 1 isoform X3"
                     /calculated_mol_wt=35376
     Region          139..235
                     /region_name="CYCLIN_CCNY_like"
                     /note="cyclin box found in cyclin-Y (CCNY) family;
                     cd20540"
                     /db_xref="CDD:410243"
     CDS             1..314
                     /gene="LOC133053673"
                     /coded_by="XM_061138193.1:186..1130"
                     /db_xref="GeneID:133053673"
ORIGIN      
        1 mgntltccls pnaspklgrr agpaepdyes evyeaaagda vavapapapa avepteldfr
       61 ageghhlqhi sdrempedla lesnpsdhpr astiflsksq tdvrekrksn hlnhcdlsni
      121 lphkeqrerv peeylkhdpe hkfiyrfvht lfsaaqltde caivtlvyle rlltyaeidi
      181 cptnwkrivw gavllaskvw ddqavwnvdy sqilkditve dmnemerhfl ellqfninvs
      241 asvyakyyfd lcsladdnnl sfliaplske raqsleaisr lcedkykdlg rvavrrsfsa
      301 dnfigiqrsn ails
//
LOCUS       XP_060994177             462 aa            linear   MAM 02-DEC-2023
DEFINITION  elongation factor 1-alpha 1 [Dama dama].
ACCESSION   XP_060994177
VERSION     XP_060994177.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138194.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870882) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..462
                     /product="elongation factor 1-alpha 1"
                     /calculated_mol_wt=50010
     Region          1..460
                     /region_name="PTZ00141"
                     /note="elongation factor 1- alpha; Provisional"
                     /db_xref="CDD:185474"
     Site            14..21
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206670"
     Site            order(15,17,21..22,25,28..29,76..77,95..96,119..120,169,
                     173)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206670"
     Site            order(17,19..22,153..154,156,194..196)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206670"
     Site            order(21,64,67..68,70,72,74..76,78,89,91,93..95,97,100)
                     /site_type="other"
                     /note="EF1Balpha binding site [polypeptide binding]"
                     /db_xref="CDD:206670"
     Site            66..76
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206670"
     Site            72
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206670"
     Site            91..94
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206670"
     Site            93..111
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206670"
     Site            153..156
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206670"
     Site            194..196
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206670"
     CDS             1..462
                     /gene="LOC133053674"
                     /coded_by="XM_061138194.1:69..1457"
                     /db_xref="GeneID:133053674"
ORIGIN      
        1 mgkekthini vvighvdsgk stttghliyk cggidkrtie kfekeaaemg kgsfkyawvl
       61 dklkaererg itidislwkf etskyyvtii dapghrdfik nmitgtsqad cavlivaagv
      121 gefeagiskn gqtrehalla ytlgvkqliv gvnkmdstep pysqkryeei vkevstyikk
      181 igynpdtvaf vpisgwngdn mlepsanmpw fkgwkvtrkd gnasgttlle aldcilpptr
      241 ptdkplrlpl qdvykiggig tvpvgrvetg vlkpgmvvtf apvnvttevk svemhheals
      301 ealpgdnvgf nvknvsvkdv rrgnvagdsk ndppmeaagf taqviilnhp gqisagyapv
      361 ldchtahiac kfaelkekid rrsgkkledg pkflksgdaa ivdmvpgkpm cvesfsdypp
      421 lgrfavrdmr qtvavgvika vdkkaagagk vtksaqkaqk ak
//
LOCUS       XP_060994178             454 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box/WD repeat-containing protein 2-like [Dama dama].
ACCESSION   XP_060994178
VERSION     XP_060994178.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138195.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870885) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..454
                     /product="F-box/WD repeat-containing protein 2-like"
                     /calculated_mol_wt=51367
     Region          55..94
                     /region_name="F-box_FBXW2"
                     /note="F-box domain found in F-box/WD repeat-containing
                     protein 2 (FBXW2) and similar proteins; cd22131"
                     /db_xref="CDD:438903"
     Site            order(60,64,67..68,71..72,76,78..79,83..85,87)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438903"
     Region          140..447
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(147,163,167,173..174,186..187,201,205,211..212,
                     224..225,242,247,253..254,267,294,297,304..305,320..321,
                     340,344,350..351,362,379,384,390..391,418..419,437,442)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          151..185
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          188..223
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          229..265
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          281..319
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          327..362
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          377..417
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          423..445
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..454
                     /gene="LOC133053675"
                     /coded_by="XM_061138195.1:31..1395"
                     /db_xref="GeneID:133053675"
ORIGIN      
        1 merkdfetwl dnisvtflsl tdlqknetld hlislsgavq lrhlsnnlet llnrdfltll
       61 plelsfyllk wldpqtllmc clvskqwnkv isactevwqt acknlgwqid dsvqdalhwk
      121 kvylkailrm kqledheafe tsslighsar vyalyykdgl lctgsddlsa klwdvstgqc
      181 vygiqthtca avkfdeqklv tgsfdntvac wewssgartq hfrghtgavf svdyndeldv
      241 lvsgsadftv kvwalsagtc lntltghtew vtkvvlqkck vksllhspgd yillsadkye
      301 ikiwpigrei nckclktlsv sedrsiclqp rlhfdgkyiv cssalglyqw dfasydilrv
      361 iktpeianla llgfgdifal lfdnrylyil dlwteslisr wplpeyrksk rgssflagea
      421 swlngldghn dtglvfatsm pdhsihlvlw kqhg
//
LOCUS       XP_060994179             454 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box/WD repeat-containing protein 2-like [Dama dama].
ACCESSION   XP_060994179
VERSION     XP_060994179.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138196.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870889) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..454
                     /product="F-box/WD repeat-containing protein 2-like"
                     /calculated_mol_wt=51360
     Region          55..94
                     /region_name="F-box_FBXW2"
                     /note="F-box domain found in F-box/WD repeat-containing
                     protein 2 (FBXW2) and similar proteins; cd22131"
                     /db_xref="CDD:438903"
     Site            order(60,64,67..68,71..72,76,78..79,83..85,87)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438903"
     Region          140..447
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(147,163,167,173..174,186..187,201,205,211..212,
                     224..225,242,247,253..254,267,294,297,304..305,320..321,
                     340,344,350..351,362,379,384,390..391,418..419,437,442)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          151..185
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          188..223
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          229..265
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          281..319
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          327..362
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          377..417
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          423..445
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..454
                     /gene="LOC133053677"
                     /coded_by="XM_061138196.1:22..1386"
                     /db_xref="GeneID:133053677"
ORIGIN      
        1 merkdfetwl dnisvtflsl tdlqknetld hlislsgavq lrhlshnlet llnrdfltll
       61 plelsfyllk wldpqtlltc clvskqwnkv isactevwqt acknlgwqid dsvqdalhwk
      121 kvylkailrm kqledheafe tsslighsar vyalyykdgl lctgsddlsa klwdvstgqc
      181 vygiqthtca avkfdeqklv tgsfdntvac wewssgartq hfrghtgavf svdyndeldv
      241 lvsgsadftv kvwalsagtc lntltghtew vtkvvlqkck vksllhspgd yillsadkye
      301 ikiwpigrei nckclktlsv sedrsiclqp rlhfdgkyiv cssalglyqw dfasydilrv
      361 iktpeianla llgfgdifal lfdnrylyil dlwteslisr wplpeyrksk rgssflagea
      421 swlngldghn dtglvfatsm pdhsihlvlw kqhg
//
LOCUS       XP_060994180             454 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box/WD repeat-containing protein 2-like [Dama dama].
ACCESSION   XP_060994180
VERSION     XP_060994180.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138197.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870892) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..454
                     /product="F-box/WD repeat-containing protein 2-like"
                     /calculated_mol_wt=51287
     Region          55..94
                     /region_name="F-box_FBXW2"
                     /note="F-box domain found in F-box/WD repeat-containing
                     protein 2 (FBXW2) and similar proteins; cd22131"
                     /db_xref="CDD:438903"
     Site            order(60,64,67..68,71..72,76,78..79,83..85,87)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438903"
     Region          140..447
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(147,163,167,173..174,186..187,201,205,211..212,
                     224..225,242,247,253..254,267,294,297,304..305,320..321,
                     340,344,350..351,362,379,384,390..391,418..419,437,442)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          151..185
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          188..223
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          229..265
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          281..319
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          327..362
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          377..417
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          423..445
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..454
                     /gene="LOC133053678"
                     /coded_by="XM_061138197.1:67..1431"
                     /db_xref="GeneID:133053678"
ORIGIN      
        1 merkdfetwl dnisvtflsl tdlqknetld hlislsgavq lrhlsnnlet llkrdfltll
       61 plelsfyllk wldpqtlltc clvskqwnkv isactevwqt acknlgwqid dsvqdalhwk
      121 kvylkailrm kqledheafe tsslighsar vyalyykdgl lctgsddlsa klwdvstgqc
      181 vygiqthtca avkfdeqklv tgsfdntvac wewssgartq hfrghtgavf svdyndeldv
      241 lvsgsadftv kvwalsagtc lntltghtew vtkvvlqkck vksllhspgd yillsadkye
      301 ikiwpigrei nckclktlsv sedrsiclqp rlhfdgkyiv cssalglyqw dfasydilrv
      361 iktpeianla llgigdifal lfdnrylyil dlrteslisr wplpeyrksk rgssflagea
      421 swlngldghn dtglvfatsm pdhsihlvlw kqhg
//
LOCUS       XP_060994181             454 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box/WD repeat-containing protein 2-like [Dama dama].
ACCESSION   XP_060994181
VERSION     XP_060994181.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138198.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870899) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..454
                     /product="F-box/WD repeat-containing protein 2-like"
                     /calculated_mol_wt=51367
     Region          55..94
                     /region_name="F-box_FBXW2"
                     /note="F-box domain found in F-box/WD repeat-containing
                     protein 2 (FBXW2) and similar proteins; cd22131"
                     /db_xref="CDD:438903"
     Site            order(60,64,67..68,71..72,76,78..79,83..85,87)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438903"
     Region          140..447
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(147,163,167,173..174,186..187,201,205,211..212,
                     224..225,242,247,253..254,267,294,297,304..305,320..321,
                     340,344,350..351,362,379,384,390..391,418..419,437,442)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          151..185
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          188..223
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          229..265
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          281..319
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          327..362
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          377..417
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          423..445
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..454
                     /gene="LOC133053679"
                     /coded_by="XM_061138198.1:31..1395"
                     /db_xref="GeneID:133053679"
ORIGIN      
        1 merkdfetwl dnisvtflsl tdlqknetld hlislsgavq lrhlsnnlet llnrdfltll
       61 plelsfyllk wldpqtllmc clvskqwnkv isactevwqt acknlgwqid dsvqdalhwk
      121 kvylkailrm kqledheafe tsslighsar vyalyykdgl lctgsddlsa klwdvstgqc
      181 vygiqthtca avkfdeqklv tgsfdntvac wewssgartq hfrghtgavf svdyndeldv
      241 lvsgsadftv kvwalsagtc lntltghtew vtkvvlqkck vksllhspgd yillsadkye
      301 ikiwpigrei nckclktlsv sedrsiclqp rlhfdgkyiv cssalglyqw dfasydilrv
      361 iktpeianla llgfgdifal lfdnrylyil dlwteslisr wplpeyrksk rgssflagea
      421 swlngldghn dtglvfatsm pdhsihlvlw kqhg
//
LOCUS       XP_060994183             454 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box/WD repeat-containing protein 2-like [Dama dama].
ACCESSION   XP_060994183
VERSION     XP_060994183.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138200.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870900) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..454
                     /product="F-box/WD repeat-containing protein 2-like"
                     /calculated_mol_wt=51321
     Region          55..94
                     /region_name="F-box_FBXW2"
                     /note="F-box domain found in F-box/WD repeat-containing
                     protein 2 (FBXW2) and similar proteins; cd22131"
                     /db_xref="CDD:438903"
     Site            order(60,64,67..68,71..72,76,78..79,83..85,87)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438903"
     Region          140..447
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(147,163,167,173..174,186..187,201,205,211..212,
                     224..225,242,247,253..254,267,294,297,304..305,320..321,
                     340,344,350..351,362,379,384,390..391,418..419,437,442)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          151..185
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          188..223
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          229..265
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          281..319
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          327..362
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          377..417
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          423..445
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..454
                     /gene="LOC133053680"
                     /coded_by="XM_061138200.1:139..1503"
                     /db_xref="GeneID:133053680"
ORIGIN      
        1 merkdfetwl dnisvtflsl tdlqknetld hlislsgavq lrhlsnnlet llkrdfltll
       61 plelsfyllk wldpqtlltc clvskqwnkv isactevwqt acknlgwqid dsvqdalhwk
      121 kvylkailrm kqledheafe tsslighsar vyalyykdgl lctgsddlsa klwdvstgqc
      181 vygiqthtca avkfdeqklv tgsfdntvac wewssgartq hfrghtgavf svdyndeldv
      241 lvsgsadftv kvwalsagtc lntltghtew vtkvvlqkck vksllhspgd yillsadkye
      301 ikiwpigrei nckclktlsv sedrsiclqp rlhfdgkyiv cssalglyqw dfasydilrv
      361 iktpeianla llgfgdifal lfdnrylyil dlrteslisr wplpeyrksk rgssflagea
      421 swlngldghn dtglvfatsm pdhsihlvlw kqhg
//
LOCUS       XP_060994184             454 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box/WD repeat-containing protein 2-like [Dama dama].
ACCESSION   XP_060994184
VERSION     XP_060994184.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138201.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870900) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..454
                     /product="F-box/WD repeat-containing protein 2-like"
                     /calculated_mol_wt=51321
     Region          55..94
                     /region_name="F-box_FBXW2"
                     /note="F-box domain found in F-box/WD repeat-containing
                     protein 2 (FBXW2) and similar proteins; cd22131"
                     /db_xref="CDD:438903"
     Site            order(60,64,67..68,71..72,76,78..79,83..85,87)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438903"
     Region          140..447
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(147,163,167,173..174,186..187,201,205,211..212,
                     224..225,242,247,253..254,267,294,297,304..305,320..321,
                     340,344,350..351,362,379,384,390..391,418..419,437,442)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          151..185
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          188..223
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          229..265
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          281..319
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          327..362
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          377..417
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          423..445
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..454
                     /gene="LOC133053681"
                     /coded_by="XM_061138201.1:139..1503"
                     /db_xref="GeneID:133053681"
ORIGIN      
        1 merkdfetwl dnisvtflsl tdlqknetld hlislsgavq lrhlsnnlet llkrdfltll
       61 plelsfyllk wldpqtlltc clvskqwnkv isactevwqt acknlgwqid dsvqdalhwk
      121 kvylkailrm kqledheafe tsslighsar vyalyykdgl lctgsddlsa klwdvstgqc
      181 vygiqthtca avkfdeqklv tgsfdntvac wewssgartq hfrghtgavf svdyndeldv
      241 lvsgsadftv kvwalsagtc lntltghtew vtkvvlqkck vksllhspgd yillsadkye
      301 ikiwpigrei nckclktlsv sedrsiclqp rlhfdgkyiv cssalglyqw dfasydilrv
      361 iktpeianla llgfgdifal lfdnrylyil dlrteslisr wplpeyrksk rgssflagea
      421 swlngldghn dtglvfatsm pdhsihlvlw kqhg
//
LOCUS       XP_060994185             454 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box/WD repeat-containing protein 2-like [Dama dama].
ACCESSION   XP_060994185
VERSION     XP_060994185.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138202.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870900) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..454
                     /product="F-box/WD repeat-containing protein 2-like"
                     /calculated_mol_wt=51321
     Region          55..94
                     /region_name="F-box_FBXW2"
                     /note="F-box domain found in F-box/WD repeat-containing
                     protein 2 (FBXW2) and similar proteins; cd22131"
                     /db_xref="CDD:438903"
     Site            order(60,64,67..68,71..72,76,78..79,83..85,87)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438903"
     Region          140..447
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(147,163,167,173..174,186..187,201,205,211..212,
                     224..225,242,247,253..254,267,294,297,304..305,320..321,
                     340,344,350..351,362,379,384,390..391,418..419,437,442)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          151..185
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          188..223
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          229..265
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          281..319
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          327..362
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          377..417
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          423..445
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..454
                     /gene="LOC133053682"
                     /coded_by="XM_061138202.1:139..1503"
                     /db_xref="GeneID:133053682"
ORIGIN      
        1 merkdfetwl dnisvtflsl tdlqknetld hlislsgavq lrhlsnnlet llkrdfltll
       61 plelsfyllk wldpqtlltc clvskqwnkv isactevwqt acknlgwqid dsvqdalhwk
      121 kvylkailrm kqledheafe tsslighsar vyalyykdgl lctgsddlsa klwdvstgqc
      181 vygiqthtca avkfdeqklv tgsfdntvac wewssgartq hfrghtgavf svdyndeldv
      241 lvsgsadftv kvwalsagtc lntltghtew vtkvvlqkck vksllhspgd yillsadkye
      301 ikiwpigrei nckclktlsv sedrsiclqp rlhfdgkyiv cssalglyqw dfasydilrv
      361 iktpeianla llgfgdifal lfdnrylyil dlrteslisr wplpeyrksk rgssflagea
      421 swlngldghn dtglvfatsm pdhsihlvlw kqhg
//
LOCUS       XP_060994186             454 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box/WD repeat-containing protein 2-like [Dama dama].
ACCESSION   XP_060994186
VERSION     XP_060994186.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138203.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870900) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..454
                     /product="F-box/WD repeat-containing protein 2-like"
                     /calculated_mol_wt=51311
     Region          55..94
                     /region_name="F-box_FBXW2"
                     /note="F-box domain found in F-box/WD repeat-containing
                     protein 2 (FBXW2) and similar proteins; cd22131"
                     /db_xref="CDD:438903"
     Site            order(60,64,67..68,71..72,76,78..79,83..85,87)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438903"
     Region          140..447
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(147,163,167,173..174,186..187,201,205,211..212,
                     224..225,242,247,253..254,267,294,297,304..305,320..321,
                     340,344,350..351,362,379,384,390..391,418..419,437,442)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          151..185
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          188..223
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          229..265
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          281..319
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          327..362
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          377..417
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          423..445
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..454
                     /gene="LOC133053683"
                     /coded_by="XM_061138203.1:22..1386"
                     /db_xref="GeneID:133053683"
ORIGIN      
        1 merkdfetwl dnisvtflsl tdlqknetld hlislsgavq lrhlsnnlet llkrdfltll
       61 plelsfyllk wldpqtlltc clvskqwnkv isactevwqt acknlgwqid dsvqdalhwk
      121 kvylkailrm kqledheafe tsslighsar vyalyykdgl lctgsddlsa klwdvstgqc
      181 vygiqthtca avkfdeqklv tgsfdntvac wewssgartq hfrghtgavf svdyndeldv
      241 lvsgsadftv kvwalsagtc lntltghtew vtkvvlqkck vksllhspgd yillsadkye
      301 ikiwpigrei nckclktlsv sedrsiclqp rlhfdgkyiv cssalglyqw dfasydilrv
      361 iktpeianla llgfgdifal lfdnrylyil dlrteslisr wplseyrksk rgssflagea
      421 swlngldghn dtglvfatsm pdhsihlvlw kqhg
//
LOCUS       XP_060994187             462 aa            linear   MAM 02-DEC-2023
DEFINITION  elongation factor 1-alpha 1 [Dama dama].
ACCESSION   XP_060994187
VERSION     XP_060994187.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138204.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870902) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..462
                     /product="elongation factor 1-alpha 1"
                     /calculated_mol_wt=50010
     Region          1..460
                     /region_name="PTZ00141"
                     /note="elongation factor 1- alpha; Provisional"
                     /db_xref="CDD:185474"
     Site            14..21
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206670"
     Site            order(15,17,21..22,25,28..29,76..77,95..96,119..120,169,
                     173)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206670"
     Site            order(17,19..22,153..154,156,194..196)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206670"
     Site            order(21,64,67..68,70,72,74..76,78,89,91,93..95,97,100)
                     /site_type="other"
                     /note="EF1Balpha binding site [polypeptide binding]"
                     /db_xref="CDD:206670"
     Site            66..76
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206670"
     Site            72
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206670"
     Site            91..94
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206670"
     Site            93..111
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206670"
     Site            153..156
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206670"
     Site            194..196
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206670"
     CDS             1..462
                     /gene="LOC133053684"
                     /coded_by="XM_061138204.1:69..1457"
                     /db_xref="GeneID:133053684"
ORIGIN      
        1 mgkekthini vvighvdsgk stttghliyk cggidkrtie kfekeaaemg kgsfkyawvl
       61 dklkaererg itidislwkf etskyyvtii dapghrdfik nmitgtsqad cavlivaagv
      121 gefeagiskn gqtrehalla ytlgvkqliv gvnkmdstep pysqkryeei vkevstyikk
      181 igynpdtvaf vpisgwngdn mlepsanmpw fkgwkvtrkd gnasgttlle aldcilpptr
      241 ptdkplrlpl qdvykiggig tvpvgrvetg vlkpgmvvtf apvnvttevk svemhheals
      301 ealpgdnvgf nvknvsvkdv rrgnvagdsk ndppmeaagf taqviilnhp gqisagyapv
      361 ldchtahiac kfaelkekid rrsgkkledg pkflksgdaa ivdmvpgkpm cvesfsdypp
      421 lgrfavrdmr qtvavgvika vdkkaagagk vtksaqkaqk ak
//
LOCUS       XP_060994188             462 aa            linear   MAM 02-DEC-2023
DEFINITION  elongation factor 1-alpha 1-like [Dama dama].
ACCESSION   XP_060994188
VERSION     XP_060994188.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138205.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870902) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..462
                     /product="elongation factor 1-alpha 1-like"
                     /calculated_mol_wt=50040
     Region          1..460
                     /region_name="PTZ00141"
                     /note="elongation factor 1- alpha; Provisional"
                     /db_xref="CDD:185474"
     Site            14..21
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206670"
     Site            order(15,17,21..22,25,28..29,76..77,95..96,119..120,169,
                     173)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206670"
     Site            order(17,19..22,153..154,156,194..196)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206670"
     Site            order(21,64,67..68,70,72,74..76,78,89,91,93..95,97,100)
                     /site_type="other"
                     /note="EF1Balpha binding site [polypeptide binding]"
                     /db_xref="CDD:206670"
     Site            66..76
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206670"
     Site            72
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206670"
     Site            91..94
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206670"
     Site            93..111
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206670"
     Site            153..156
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206670"
     Site            194..196
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206670"
     CDS             1..462
                     /gene="LOC133053685"
                     /coded_by="XM_061138205.1:69..1457"
                     /db_xref="GeneID:133053685"
ORIGIN      
        1 mgkekthini vvighvdsgk stttghliyk cggidkrtie kfekeaaemg kgsfkyawvl
       61 dklkaererg itidislwkf etskyyvtii dapghrdfik nmitgtsqad cavlivaagv
      121 gefeasiskn gqtrehalla ytlgvkqliv gvnkmdstep pysqkryeei vkevstyikk
      181 igynpdtvaf vpisgwngdn mlepsanmpw fkgwkvtrkd gnasgttlle aldcilpptr
      241 ptdkplrlpl qdvykiggig tvpvgrvetg vlkpgmvvtf apvnvttevk svemhheals
      301 ealpgdnvgf nvknvsvkdv rrgnvagdsk ndppmeaagf taqviilnhp gqisagyapv
      361 ldchtahiac kfaelkekid rrsgkkledg pkflksgdaa ivdmvpgkpm cvesfsdypp
      421 lgrfavrdmr qtvavgvika vdkkaagagk vtksaqkaqk ak
//
LOCUS       XP_060994189             462 aa            linear   MAM 02-DEC-2023
DEFINITION  elongation factor 1-alpha 1-like [Dama dama].
ACCESSION   XP_060994189
VERSION     XP_060994189.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138206.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870902) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..462
                     /product="elongation factor 1-alpha 1-like"
                     /calculated_mol_wt=49967
     Region          1..460
                     /region_name="PTZ00141"
                     /note="elongation factor 1- alpha; Provisional"
                     /db_xref="CDD:185474"
     Site            14..21
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206670"
     Site            order(15,17,21..22,25,28..29,76..77,95..96,119..120,169,
                     173)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206670"
     Site            order(17,19..22,153..154,156,194..196)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206670"
     Site            order(21,64,67..68,70,72,74..76,78,89,91,93..95,97,100)
                     /site_type="other"
                     /note="EF1Balpha binding site [polypeptide binding]"
                     /db_xref="CDD:206670"
     Site            66..76
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206670"
     Site            72
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206670"
     Site            91..94
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206670"
     Site            93..111
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206670"
     Site            153..156
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206670"
     Site            194..196
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206670"
     CDS             1..462
                     /gene="LOC133053686"
                     /coded_by="XM_061138206.1:34..1422"
                     /db_xref="GeneID:133053686"
ORIGIN      
        1 mgkekthini vvighvdsgk stttghliyk cggidkrtie kfekeaaemg kgsfkyawvl
       61 dklkaererg itidislwkf etskyyvtii dapghrdfik nmitgtsqad cavlivaagv
      121 gefeagiskn gqtrehalla ytlgvkqliv gvnkmdstep pysqkryeei vkevstyikk
      181 igynpdtvaf vpisgwngdn mlepsanmpw fkgwkvtrkd gnasgttlle aldcilpptr
      241 ptdkplrlpl qdvykiggig tvpvgrvetg vlkpgmvvtf apvnvttevk svemhheals
      301 ealpgdnvgf nvknvsvkdv rrgnvagdsk ndppmeaagf taqviilnhp gqisagyapv
      361 ldchtahiac kfaelkekid rlsgkkledg pkflksgdaa ivdmvpgkpm cvesfsdypp
      421 lgrfavrdmr qtvavgvika vdkkaagagk vtksaqkaqk ak
//
LOCUS       XP_060994191             402 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 322 [Dama dama].
ACCESSION   XP_060994191
VERSION     XP_060994191.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138208.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870905) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..402
                     /product="zinc finger protein 322"
                     /calculated_mol_wt=47025
     Region          45..65
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <69..219
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          73..93
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(73,76,89,93)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          101..121
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          129..149
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(134,136,138,140..141,144..145,148,162,164,168..169,
                     172..173,176,190,192,194,196..197,200..201,204)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          157..177
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(157,160,173,177)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          185..205
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <207..291
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     Region          213..233
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          241..261
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          269..289
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          295..315
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          353..373
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(353,356,369,373)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     CDS             1..402
                     /gene="LOC133053687"
                     /coded_by="XM_061138208.1:548..1756"
                     /db_xref="GeneID:133053687"
ORIGIN      
        1 mytseerenq rtqkrkiyhv cpqkgkkifi hvheitqidd qiyqclereq nfcenlalim
       61 certhtgekp yrcdmcektf iqssdlishq rihsyekpyk cskceksfwh hlalsghqrt
      121 hagkkfytcd icgknfgqss dllvhqrsht gekpylcsec dkcfsrstnl irhrrthtge
      181 kpfkclecek afsgksdlis hqrthtgerp ykcskceksy rhrsafivhk rvhtgekpyk
      241 cgacekcfgq ksdlivhqrv htgekpykcl ecmrsftrsa nlirhqatht htfkcleyek
      301 sfscssdliv hqrihmeekp hqwsacesgf llgmdfvaqq kmrtqteelh ykysvcdksf
      361 hqssalfqhq tihigekpyi cnvaekdlel spphvseasq ms
//
LOCUS       XP_060994192             402 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 322-like [Dama dama].
ACCESSION   XP_060994192
VERSION     XP_060994192.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138209.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870908) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..402
                     /product="zinc finger protein 322-like"
                     /calculated_mol_wt=46995
     Region          45..65
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <69..219
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          73..93
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(73,76,89,93)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          101..121
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          129..149
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(134,136,138,140..141,144..145,148,162,164,168..169,
                     172..173,176,190,192,194,196..197,200..201,204)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          157..177
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(157,160,173,177)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          185..205
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <207..291
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     Region          213..233
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          241..261
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          269..289
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          295..315
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          353..373
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(353,356,369,373)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     CDS             1..402
                     /gene="LOC133053688"
                     /coded_by="XM_061138209.1:549..1757"
                     /db_xref="GeneID:133053688"
ORIGIN      
        1 mytseerenq rtqkrkiyhv cpqkgkkifi hvheitqidd qiyqclereq nfcenlalim
       61 certhtgekp yrcdmcektf iqssdlishq rihsyekpyk cskceksfrh hlalsghqrt
      121 hagkkfytcd icgknfgqss dllvhqrsht gekpylcsec dkcfsrstnl irhrrthtge
      181 kpfkclecek afsgksdlis hqrthtgerp ykcskceksy rhrsafivhk rvhtgekpyk
      241 cgacekcfgq ksdlivhqrv htgekpykcl ecmrsftrsa nlirhqatht htfkcleyek
      301 sfscssdliv hqrihmeekp hqwsacesgf llgmdfvaqq kmrtqteelh ykysvcdksf
      361 hqssalfqhq tihigekpyi cnvaekdlel spphvseasq ms
//
LOCUS       XP_060994193             454 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box/WD repeat-containing protein 2-like [Dama dama].
ACCESSION   XP_060994193
VERSION     XP_060994193.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138210.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870909) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..454
                     /product="F-box/WD repeat-containing protein 2-like"
                     /calculated_mol_wt=51321
     Region          55..94
                     /region_name="F-box_FBXW2"
                     /note="F-box domain found in F-box/WD repeat-containing
                     protein 2 (FBXW2) and similar proteins; cd22131"
                     /db_xref="CDD:438903"
     Site            order(60,64,67..68,71..72,76,78..79,83..85,87)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438903"
     Region          140..447
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(147,163,167,173..174,186..187,201,205,211..212,
                     224..225,242,247,253..254,267,294,297,304..305,320..321,
                     340,344,350..351,362,379,384,390..391,418..419,437,442)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          151..185
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          188..223
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          229..265
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          281..319
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          327..362
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          377..417
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          423..445
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..454
                     /gene="LOC133053689"
                     /coded_by="XM_061138210.1:158..1522"
                     /db_xref="GeneID:133053689"
ORIGIN      
        1 merkdfetwl dnisvtflsl tdlqknetld hlislsgavq lrhlsnnlet llkrdfltll
       61 plelsfyllk wldpqtlltc clvskqwnkv isactevwqt acknlgwqid dsvqdalhwk
      121 kvylkailrm kqledheafe tsslighsar vyalyykdgl lctgsddlsa klwdvstgqc
      181 vygiqthtca avkfdeqklv tgsfdntvac wewssgartq hfrghtgavf svdyndeldv
      241 lvsgsadftv kvwalsagtc lntltghtew vtkvvlqkck vksllhspgd yillsadkye
      301 ikiwpigrei nckclktlsv sedrsiclqp rlhfdgkyiv cssalglyqw dfasydilrv
      361 iktpeianla llgfgdifal lfdnrylyil dlrteslisr wplpeyrksk rgssflagea
      421 swlngldghn dtglvfatsm pdhsihlvlw kqhg
//
LOCUS       XP_060994194             454 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box/WD repeat-containing protein 2-like [Dama dama].
ACCESSION   XP_060994194
VERSION     XP_060994194.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138211.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870910) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..454
                     /product="F-box/WD repeat-containing protein 2-like"
                     /calculated_mol_wt=51395
     Region          55..94
                     /region_name="F-box_FBXW2"
                     /note="F-box domain found in F-box/WD repeat-containing
                     protein 2 (FBXW2) and similar proteins; cd22131"
                     /db_xref="CDD:438903"
     Site            order(60,64,67..68,71..72,76,78..79,83..85,87)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438903"
     Region          140..447
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(147,163,167,173..174,186..187,201,205,211..212,
                     224..225,242,247,253..254,267,294,297,304..305,320..321,
                     340,344,350..351,362,379,384,390..391,418..419,437,442)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          151..185
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          188..223
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          229..265
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          281..319
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          327..362
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          377..417
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          423..445
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..454
                     /gene="LOC133053690"
                     /coded_by="XM_061138211.1:32..1396"
                     /db_xref="GeneID:133053690"
ORIGIN      
        1 merkdfetwl dnisvtflsl tdlqknetld hlislsgavq lrhlsnnlet llnrdfltll
       61 plelsfyllk wldpqtlltc clvskqwnkv isactevwqt acknlgwqid dsvqdalhwk
      121 kvylkailrm kqledheafe tsslighsar vyalyykdgl lctgsddlsa klwdvstgqc
      181 vygiqthtca avkfdeqklv tgsfdntvac wewssgartq hfrghtgavf svdyndeldv
      241 lvsgsadftv kvwalsagtc lntltghtew vtkvvlqkck vksllhspgd yillsadkye
      301 ikiwpigrei nckclktlsv sedrsiclqp rlhfdgkyiv cssalglyqw dfasydilrv
      361 iktpeianla llgfgdifal lfdnrylyil dlwteslisr wplpeyrksk rgssflegea
      421 swlngldghn dtglvfatsm pdhsihlvlw kqhg
//
LOCUS       XP_060994195             454 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box/WD repeat-containing protein 2-like [Dama dama].
ACCESSION   XP_060994195
VERSION     XP_060994195.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138212.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870920) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..454
                     /product="F-box/WD repeat-containing protein 2-like"
                     /calculated_mol_wt=51298
     Region          55..94
                     /region_name="F-box_FBXW2"
                     /note="F-box domain found in F-box/WD repeat-containing
                     protein 2 (FBXW2) and similar proteins; cd22131"
                     /db_xref="CDD:438903"
     Site            order(60,64,67..68,71..72,76,78..79,83..85,87)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438903"
     Region          140..447
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(147,163,167,173..174,186..187,201,205,211..212,
                     224..225,242,247,253..254,267,294,297,304..305,320..321,
                     340,344,350..351,362,379,384,390..391,418..419,437,442)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          151..185
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          188..223
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          229..265
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          281..319
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          377..417
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          423..445
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..454
                     /gene="LOC133053691"
                     /coded_by="XM_061138212.1:31..1395"
                     /db_xref="GeneID:133053691"
ORIGIN      
        1 merkdfetwl dnisvtflsl tdlqknetld hlislsgavq lrhlsnnlet llnrdfltll
       61 plelsfyllk wldpqtllmc clvskqwnkv isactevwqt acknlgwqid dsvqdalhwk
      121 kvylkailrm kqledheafe tsslighsar vyalyykdgl lctgsddlsa klwdvstgqc
      181 vygiqthtca avkfdeqklv tgsfdntvac wewssgartq hfrghtgavf svdyndeldv
      241 lvsgsadftv kvwalsagtc lntltghtew vtkvvlqkck vksllhspgd yillsadkye
      301 ikiwpigrei nckclktlsv sedrsiclqp slhfdgkyiv cssalglyqw dfasydilrv
      361 iktpeianla llgfgdifal lfdnrylyil dlwteslisr wplpeyrksk rgssflagea
      421 swlngldghn dtglvfatsm pdhsihlvlw kqhg
//
LOCUS       XP_060994196             423 aa            linear   MAM 02-DEC-2023
DEFINITION  S100P-binding protein-like [Dama dama].
ACCESSION   XP_060994196
VERSION     XP_060994196.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138213.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870926) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..423
                     /product="S100P-binding protein-like"
                     /calculated_mol_wt=47420
     Region          21..409
                     /region_name="S100PBPR"
                     /note="S100P-binding protein; pfam15427"
                     /db_xref="CDD:464711"
     CDS             1..423
                     /gene="LOC133053692"
                     /coded_by="XM_061138213.1:179..1450"
                     /db_xref="GeneID:133053692"
ORIGIN      
        1 mmcslvpseq ssgtsllpkd napfswssld edelddslle lsdgeddghf sfteeqiqel
       61 lkdddlsneh fpwggglpnd dsrnvekgek gsqipldtpq ekdspynmgp eaetpdtfkl
      121 pqlttsvghg ptptkplnrr faleknlikv tvapfdptvc dvvldkdkty vskvtsrvte
      181 kpsslgeemr eddlspnest lctesegisp nnsaydgppl pssnnnfqht vsdknisnsk
      241 kptpvfsqil dhsetsntgs swrngsykss femklpvsss sskqdvldkd sgklkvhekr
      301 lgkvipvlqt ktrtnvptfs psdlekqkqs ylrnviahie dpvdsnqgtl gelcalmdqv
      361 hhmhnqkwqh psdltrrnya rfrqrnlqry sltqwvdqnk rshhrfqrlp dfpygplvss
      421 hqq
//
LOCUS       XP_060994198             454 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box/WD repeat-containing protein 2-like [Dama dama].
ACCESSION   XP_060994198
VERSION     XP_060994198.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138215.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870932) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..454
                     /product="F-box/WD repeat-containing protein 2-like"
                     /calculated_mol_wt=51381
     Region          55..94
                     /region_name="F-box_FBXW2"
                     /note="F-box domain found in F-box/WD repeat-containing
                     protein 2 (FBXW2) and similar proteins; cd22131"
                     /db_xref="CDD:438903"
     Site            order(60,64,67..68,71..72,76,78..79,83..85,87)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438903"
     Region          140..447
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(147,163,167,173..174,186..187,201,205,211..212,
                     224..225,242,247,253..254,267,294,297,304..305,320..321,
                     340,344,350..351,362,379,384,390..391,418..419,437,442)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          151..185
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          188..223
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          229..265
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          281..319
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          367..402
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..454
                     /gene="LOC133053693"
                     /coded_by="XM_061138215.1:88..1452"
                     /db_xref="GeneID:133053693"
ORIGIN      
        1 merkdfetwl dnisvtflsl tdlqknetld hlislsgavq lrhlsnnlet llkrdfltll
       61 plelsfyllk wldpqtlltc clvskqwnkv isactevwqt acknlgwqid dsvqdalhwk
      121 kvylkailrm kqledheafe tsslighsar vyalyykdgl lctgsddlsa klwdvstgqc
      181 vygiqthtca avkfdeqklv tgsfdntvac wewssgartq hfrghtgavf svdyndeldv
      241 lvsgsadftv kvwalsagtc lntltghtew vtkvvlqkck vksllhspgd yillsadkye
      301 ikiwpigrei nckclktlsv sedrsiclqp rlhfdgkyiv cssalglyqw dfasydilrv
      361 iktpeianla llgfgdifal lfdnrylyil dlrteslisr wplpeyrksk rgssflagea
      421 fwlngldghn dtglvfatsm pdhsihlvlw kqhg
//
LOCUS       XP_060994199             454 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box/WD repeat-containing protein 2-like [Dama dama].
ACCESSION   XP_060994199
VERSION     XP_060994199.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138216.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870934) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..454
                     /product="F-box/WD repeat-containing protein 2-like"
                     /calculated_mol_wt=51351
     Region          55..94
                     /region_name="F-box_FBXW2"
                     /note="F-box domain found in F-box/WD repeat-containing
                     protein 2 (FBXW2) and similar proteins; cd22131"
                     /db_xref="CDD:438903"
     Site            order(60,64,67..68,71..72,76,78..79,83..85,87)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438903"
     Region          140..447
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(147,163,167,173..174,186..187,201,205,211..212,
                     224..225,242,247,253..254,267,294,297,304..305,320..321,
                     340,344,350..351,362,379,384,390..391,418..419,437,442)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          151..185
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          188..223
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          229..265
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          281..319
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          327..362
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          377..417
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          423..445
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..454
                     /gene="LOC133053694"
                     /coded_by="XM_061138216.1:22..1386"
                     /db_xref="GeneID:133053694"
ORIGIN      
        1 merkdfetwl dnisvtflsl tdlqknetld hlislsgavq lrhlsnnlet llkrdfltll
       61 plelsfyllk wldpqtlltc clvskqwnkv isactevwqt acknlgwqid dsvqdalhwk
      121 kvylkailrm kqledheafe tsslighsar vyalyykdgl lctgsddlsa klwdvstgqc
      181 vygiqthtca avkfdeqklv tgsfdntvac wewssgartq hfwghtgavf svdyndeldv
      241 lvsgsadftv kvwalsagtc lntltghtew vtkvvlqkck vksllhspgd yillsadkye
      301 ikiwpigrei nckclktlsv sedrsiclqp rlhfdgkyiv cssalglyqw dfasydilrv
      361 iktpeianla llgfgdifal lfdnrylyil dlrteslisr wplpeyrksk rgssflagea
      421 swlngldghn dtglvfatsm pdhsihlvlw kqhg
//
LOCUS       XP_060994200             454 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box/WD repeat-containing protein 2-like [Dama dama].
ACCESSION   XP_060994200
VERSION     XP_060994200.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138217.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870934) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..454
                     /product="F-box/WD repeat-containing protein 2-like"
                     /calculated_mol_wt=51321
     Region          55..94
                     /region_name="F-box_FBXW2"
                     /note="F-box domain found in F-box/WD repeat-containing
                     protein 2 (FBXW2) and similar proteins; cd22131"
                     /db_xref="CDD:438903"
     Site            order(60,64,67..68,71..72,76,78..79,83..85,87)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438903"
     Region          140..447
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(147,163,167,173..174,186..187,201,205,211..212,
                     224..225,242,247,253..254,267,294,297,304..305,320..321,
                     340,344,350..351,362,379,384,390..391,418..419,437,442)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          151..185
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          188..223
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          229..265
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          281..319
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          327..362
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          377..417
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          423..445
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..454
                     /gene="LOC133053695"
                     /coded_by="XM_061138217.1:22..1386"
                     /db_xref="GeneID:133053695"
ORIGIN      
        1 merkdfetwl dnisvtflsl tdlqknetld hlislsgavq lrhlsnnlet llkrdfltll
       61 plelsfyllk wldpqtlltc clvskqwnkv isactevwqt acknlgwqid dsvqdalhwk
      121 kvylkailrm kqledheafe tsslighsar vyalyykdgl lctgsddlsa klwdvstgqc
      181 vygiqthtca avkfdeqklv tgsfdntvac wewssgartq hfrghtgavf svdyndeldv
      241 lvsgsadftv kvwalsagtc lntltghtew vtkvvlqkck vksllhspgd yillsadkye
      301 ikiwpigrei nckclktlsv sedrsiclqp rlhfdgkyiv cssalglyqw dfasydilrv
      361 iktpeianla llgfgdifal lfdnrylyil dlrteslisr wplpeyrksk rgssflagea
      421 swlngldghn dtglvfatsm pdhsihlvlw kqhg
//
LOCUS       XP_060994201             402 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 322 [Dama dama].
ACCESSION   XP_060994201
VERSION     XP_060994201.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138218.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870935) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..402
                     /product="zinc finger protein 322"
                     /calculated_mol_wt=47025
     Region          45..65
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <69..219
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          73..93
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(73,76,89,93)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          101..121
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          129..149
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(134,136,138,140..141,144..145,148,162,164,168..169,
                     172..173,176,190,192,194,196..197,200..201,204)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          157..177
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(157,160,173,177)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          185..205
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <207..291
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     Region          213..233
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          241..261
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          269..289
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          295..315
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          353..373
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(353,356,369,373)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     CDS             1..402
                     /gene="LOC133053696"
                     /coded_by="XM_061138218.1:549..1757"
                     /db_xref="GeneID:133053696"
ORIGIN      
        1 mytseerenq rtqkrkiyhv cpqkgkkifi hvheitqidd qiyqclereq nfcenlalim
       61 certhtgekp yrcdmcektf iqssdlishq rihsyekpyk cskceksfwh hlalsghqrt
      121 hagkkfytcd icgknfgqss dllvhqrsht gekpylcsec dkcfsrstnl irhrrthtge
      181 kpfkclecek afsgksdlis hqrthtgerp ykcskceksy rhrsafivhk rvhtgekpyk
      241 cgacekcfgq ksdlivhqrv htgekpykcl ecmrsftrsa nlirhqatht htfkcleyek
      301 sfscssdliv hqrihmeekp hqwsacesgf llgmdfvaqq kmrtqteelh ykysvcdksf
      361 hqssalfqhq tihigekpyi cnvaekdlel spphvseasq ms
//
LOCUS       XP_060994203             402 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 322 [Dama dama].
ACCESSION   XP_060994203
VERSION     XP_060994203.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138220.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870935) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..402
                     /product="zinc finger protein 322"
                     /calculated_mol_wt=47025
     Region          45..65
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <69..219
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          73..93
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(73,76,89,93)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          101..121
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          129..149
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(134,136,138,140..141,144..145,148,162,164,168..169,
                     172..173,176,190,192,194,196..197,200..201,204)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          157..177
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(157,160,173,177)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          185..205
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <207..291
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     Region          213..233
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          241..261
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          269..289
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          295..315
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          353..373
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(353,356,369,373)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     CDS             1..402
                     /gene="LOC133053697"
                     /coded_by="XM_061138220.1:549..1757"
                     /db_xref="GeneID:133053697"
ORIGIN      
        1 mytseerenq rtqkrkiyhv cpqkgkkifi hvheitqidd qiyqclereq nfcenlalim
       61 certhtgekp yrcdmcektf iqssdlishq rihsyekpyk cskceksfwh hlalsghqrt
      121 hagkkfytcd icgknfgqss dllvhqrsht gekpylcsec dkcfsrstnl irhrrthtge
      181 kpfkclecek afsgksdlis hqrthtgerp ykcskceksy rhrsafivhk rvhtgekpyk
      241 cgacekcfgq ksdlivhqrv htgekpykcl ecmrsftrsa nlirhqatht htfkcleyek
      301 sfscssdliv hqrihmeekp hqwsacesgf llgmdfvaqq kmrtqteelh ykysvcdksf
      361 hqssalfqhq tihigekpyi cnvaekdlel spphvseasq ms
//
LOCUS       XP_060994204             402 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 322-like [Dama dama].
ACCESSION   XP_060994204
VERSION     XP_060994204.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138221.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870935) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..402
                     /product="zinc finger protein 322-like"
                     /calculated_mol_wt=46926
     Region          45..65
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <69..219
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          73..93
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(73,76,89,93)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          101..121
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          129..149
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(134,136,138,140..141,144..145,148,162,164,168..169,
                     172..173,176,190,192,194,196..197,200..201,204)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          157..177
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(157,160,173,177)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          185..205
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <207..291
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     Region          213..233
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          241..261
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          269..289
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          295..315
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          353..373
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(353,356,369,373)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     CDS             1..402
                     /gene="LOC133053698"
                     /coded_by="XM_061138221.1:549..1757"
                     /db_xref="GeneID:133053698"
ORIGIN      
        1 mytseerenq rtqkrkiyhv cpqkgkkifi hvheitqidd qiyqclereq nfcenlalim
       61 certhtgekp yrcdmcektf iqssdlishq rihsyekpyk cskceksfsh hlalsghqrt
      121 hagkkfytcd icgknfgqss dllvhqrsht gekpylcsec dkcfsrstnl irhrrthtge
      181 kpfkclecek afsgksdlis hqrthtgerp ykcskceksy rhrsafivhk rvhtgekpyk
      241 cgacekcfgq ksdlivhqrv htgekpykcl ecmrsftrsa nlirhqatht htfkcleyek
      301 sfscssdliv hqrihmeekp hqwsacesgf llgmdfvaqq kmrtqteelh ykysvcdksf
      361 hqssalfqhq tihigekpyi cnvaekdlel spphvseasq ms
//
LOCUS       XP_060994205             402 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 322-like [Dama dama].
ACCESSION   XP_060994205
VERSION     XP_060994205.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138222.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870935) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..402
                     /product="zinc finger protein 322-like"
                     /calculated_mol_wt=46926
     Region          45..65
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <69..219
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          73..93
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(73,76,89,93)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          101..121
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          129..149
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(134,136,138,140..141,144..145,148,162,164,168..169,
                     172..173,176,190,192,194,196..197,200..201,204)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          157..177
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(157,160,173,177)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          185..205
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <207..291
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     Region          213..233
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          241..261
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          269..289
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          295..315
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          353..373
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(353,356,369,373)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     CDS             1..402
                     /gene="LOC133053699"
                     /coded_by="XM_061138222.1:549..1757"
                     /db_xref="GeneID:133053699"
ORIGIN      
        1 mytseerenq rtqkrkiyhv cpqkgkkifi hvheitqidd qiyqclereq nfcenlalim
       61 certhtgekp yrcdmcektf iqssdlishq rihsyekpyk cskceksfsh hlalsghqrt
      121 hagkkfytcd icgknfgqss dllvhqrsht gekpylcsec dkcfsrstnl irhrrthtge
      181 kpfkclecek afsgksdlis hqrthtgerp ykcskceksy rhrsafivhk rvhtgekpyk
      241 cgacekcfgq ksdlivhqrv htgekpykcl ecmrsftrsa nlirhqatht htfkcleyek
      301 sfscssdliv hqrihmeekp hqwsacesgf llgmdfvaqq kmrtqteelh ykysvcdksf
      361 hqssalfqhq tihigekpyi cnvaekdlel spphvseasq ms
//
LOCUS       XP_060994207             209 aa            linear   MAM 02-DEC-2023
DEFINITION  phospholipase A2 inhibitor and Ly6/PLAUR domain-containing
            protein-like [Dama dama].
ACCESSION   XP_060994207
VERSION     XP_060994207.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138224.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870966) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..209
                     /product="phospholipase A2 inhibitor and Ly6/PLAUR
                     domain-containing protein-like"
                     /calculated_mol_wt=21855
     Region          24..109
                     /region_name="TFP_LU_ECD_PINLYP_rpt1"
                     /note="first extracellular domain (ECD) found in
                     phospholipase A2 inhibitor and Ly6/PLAUR domain-containing
                     protein (PINLYP) and similar proteins; cd23571"
                     /db_xref="CDD:467101"
     Region          122..198
                     /region_name="TFP_LU_ECD_PINLYP_rpt2"
                     /note="second extracellular domain (ECD) found in
                     phospholipase A2 inhibitor and Ly6/PLAUR domain-containing
                     protein (PINLYP) and similar proteins; cd23572"
                     /db_xref="CDD:467102"
     CDS             1..209
                     /gene="LOC133053700"
                     /coded_by="XM_061138224.1:1..630"
                     /db_xref="GeneID:133053700"
ORIGIN      
        1 mkpsmkpetf llgsallctl lglgyplsce vctsdgpncs gklqtcapde dscmvvltes
       61 yrkgslavts ykgcakssec dsgsfaitmn tenymgsrrr ccqddgcnke pmpaivrnht
      121 englrcpsci aaftetctst qeavcvgeet hcvavsglaq pgikfaargc gtetachikp
      181 gtlvpsgsrl ltikktscrp spqasgkae
//
LOCUS       XP_060994208             209 aa            linear   MAM 02-DEC-2023
DEFINITION  phospholipase A2 inhibitor and Ly6/PLAUR domain-containing
            protein-like [Dama dama].
ACCESSION   XP_060994208
VERSION     XP_060994208.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138225.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870966) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..209
                     /product="phospholipase A2 inhibitor and Ly6/PLAUR
                     domain-containing protein-like"
                     /calculated_mol_wt=21855
     Region          24..109
                     /region_name="TFP_LU_ECD_PINLYP_rpt1"
                     /note="first extracellular domain (ECD) found in
                     phospholipase A2 inhibitor and Ly6/PLAUR domain-containing
                     protein (PINLYP) and similar proteins; cd23571"
                     /db_xref="CDD:467101"
     Region          122..198
                     /region_name="TFP_LU_ECD_PINLYP_rpt2"
                     /note="second extracellular domain (ECD) found in
                     phospholipase A2 inhibitor and Ly6/PLAUR domain-containing
                     protein (PINLYP) and similar proteins; cd23572"
                     /db_xref="CDD:467102"
     CDS             1..209
                     /gene="LOC133053701"
                     /coded_by="XM_061138225.1:1..630"
                     /db_xref="GeneID:133053701"
ORIGIN      
        1 mkpsmkpetf llgsallctl lglgyplsce vctsdgpncs gklqtcapde dscmvvltes
       61 yrkgslavts ykgcakssec dsgsfaitmn tenymgsrrr ccqddgcnke pmpaivrnht
      121 englrcpsci aaftetctst qeavcvgeet hcvavsglaq pgikfaargc gtetachikp
      181 gtlvpsgsrl ltikktscrp spqasgkae
//
LOCUS       XP_060994209             209 aa            linear   MAM 02-DEC-2023
DEFINITION  phospholipase A2 inhibitor and Ly6/PLAUR domain-containing
            protein-like [Dama dama].
ACCESSION   XP_060994209
VERSION     XP_060994209.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138226.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870966) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..209
                     /product="phospholipase A2 inhibitor and Ly6/PLAUR
                     domain-containing protein-like"
                     /calculated_mol_wt=21853
     Region          25..109
                     /region_name="TFP_LU_ECD_PINLYP_rpt1"
                     /note="first extracellular domain (ECD) found in
                     phospholipase A2 inhibitor and Ly6/PLAUR domain-containing
                     protein (PINLYP) and similar proteins; cd23571"
                     /db_xref="CDD:467101"
     Region          122..198
                     /region_name="TFP_LU_ECD_PINLYP_rpt2"
                     /note="second extracellular domain (ECD) found in
                     phospholipase A2 inhibitor and Ly6/PLAUR domain-containing
                     protein (PINLYP) and similar proteins; cd23572"
                     /db_xref="CDD:467102"
     CDS             1..209
                     /gene="LOC133053702"
                     /coded_by="XM_061138226.1:1..630"
                     /db_xref="GeneID:133053702"
ORIGIN      
        1 mkpsmkpetf llastllctl lglgyplsce vctsdgpncs gklqtcapde dscmvvltes
       61 nrkgslavts ykgcakssec dsgsfaitmn tenymgsrrr cckndgcnke pmpaivrnht
      121 englrcpsci aaftetctst qeavcvgeet hcvtvsglaq pgikfaargc gtetachskp
      181 gtlvpsgsrl ltikktscrp spqasgkae
//
LOCUS       XP_060994210             261 aa            linear   MAM 02-DEC-2023
DEFINITION  testis-specific Y-encoded protein 3-like [Dama dama].
ACCESSION   XP_060994210
VERSION     XP_060994210.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138227.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870975) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..261
                     /product="testis-specific Y-encoded protein 3-like"
                     /calculated_mol_wt=29993
     Region          117..261
                     /region_name="PTZ00007"
                     /note="(NAP-L) nucleosome assembly protein -L;
                     Provisional; cl08298"
                     /db_xref="CDD:471807"
     CDS             1..261
                     /gene="LOC133053703"
                     /coded_by="XM_061138227.1:1..786"
                     /db_xref="GeneID:133053703"
ORIGIN      
        1 mqapggvpse eatlywveav eegatleege isgigqevql lvldvmeeve lvvyeeqeqv
       61 sseeqcqehp rpgapsdrpa lealatlqle lepvnkkaqr vharlkhknc qrrmlnlehr
      121 saitqgirgf wikvftnhpk msclmtkqdq dmlhfmtnlk veelqhpthh cmitlsfqrn
      181 tyfqkevivk kylinvtgkr yqvscstpiq shqgferkay shrnhkssvn ffnwlsdhsf
      241 tgsdqiaevi ikdlwpnplq y
//
LOCUS       XP_060994211             261 aa            linear   MAM 02-DEC-2023
DEFINITION  testis-specific Y-encoded protein 3-like [Dama dama].
ACCESSION   XP_060994211
VERSION     XP_060994211.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138228.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870975) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..261
                     /product="testis-specific Y-encoded protein 3-like"
                     /calculated_mol_wt=30125
     Region          117..261
                     /region_name="PTZ00007"
                     /note="(NAP-L) nucleosome assembly protein -L;
                     Provisional; cl08298"
                     /db_xref="CDD:471807"
     CDS             1..261
                     /gene="LOC133053704"
                     /coded_by="XM_061138228.1:1..786"
                     /db_xref="GeneID:133053704"
ORIGIN      
        1 mqapggvpse eatlywveav eegatleege isgigqevql lvldvmeeve lvvyeeqeqv
       61 sseeqcqehp rpgapsdrpa lealatlqle lepvnkkaqr vharlkhknc qrrmlnlehr
      121 saitqgirgf wikvftnhpk msclmtkqdq dmlhfmtnlk veelqhpthh cmitlsfqrn
      181 tyfqkelivk kylinvtgkr yqvscstpiq whqgferkay srrnhkssvn ffnwlsdhsf
      241 tgsdqiaevi ikdlwpnplq y
//
LOCUS       XP_060994213             415 aa            linear   MAM 02-DEC-2023
DEFINITION  heat shock transcription factor, Y-linked-like [Dama dama].
ACCESSION   XP_060994213
VERSION     XP_060994213.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138230.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870975) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..415
                     /product="heat shock transcription factor, Y-linked-like"
                     /calculated_mol_wt=46724
     Region          80..194
                     /region_name="HSF_DNA-bind"
                     /note="HSF-type DNA-binding; pfam00447"
                     /db_xref="CDD:459813"
     CDS             1..415
                     /gene="LOC133053707"
                     /coded_by="XM_061138230.1:1..1248"
                     /db_xref="GeneID:133053707"
ORIGIN      
        1 mahisseiqd vppkdestgs etsirsslyd ctltgdkvlr smveeyafqa lyeevvikrp
       61 rytfsvsetd evnaplppgf pqklwaives dqfesiwwde sgtcivinee lfkkevlerk
      121 apfrvletns mkslvrqlnl ygfskkrptf qrsaslpdfl eeennislls klhiyynpnf
      181 krgypqllvr mkrrvginnv spisslvrdy ktkhvkarvn tddhnsdllp etsgesafsa
      241 stslsvpfiq kpytsqrvan tsalppcdlp spssisvrqt eqivvdqpav lnqvsifnwh
      301 syssytqvng hlediatttt ptsqnpivsp sqssysglmv epskfpvtys dmsahdspyp
      361 kqqqrgnsws smptttytsa sslssqliks hhymktmlik tdlsnkcqim epned
//
LOCUS       XP_060994214             415 aa            linear   MAM 02-DEC-2023
DEFINITION  heat shock transcription factor, Y-linked-like [Dama dama].
ACCESSION   XP_060994214
VERSION     XP_060994214.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138231.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870975) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..415
                     /product="heat shock transcription factor, Y-linked-like"
                     /calculated_mol_wt=46724
     Region          80..194
                     /region_name="HSF_DNA-bind"
                     /note="HSF-type DNA-binding; pfam00447"
                     /db_xref="CDD:459813"
     CDS             1..415
                     /gene="LOC133053708"
                     /coded_by="XM_061138231.1:1..1248"
                     /db_xref="GeneID:133053708"
ORIGIN      
        1 mahisseiqd vppkdestgs etsirsslyd ctltgdkvlr smveeyafqa lyeevvikrp
       61 rytfsvsetd evnaplppgf pqklwaives dqfesiwwde sgtcivinee lfkkevlerk
      121 apfrvletns mkslvrqlnl ygfskkrptf qrsaslpdfl eeennislls klhiyynpnf
      181 krgypqllvr mkrrvginnv spisslvrdy ktkhvkarvn tddhnsdllp etsgesafsa
      241 stslsvpfiq kpytsqrvan tsalppcdlp spssisvrqt eqivvdqpav lnqvsifnwh
      301 syssytqvng hlediatttt ptsqnpivsp sqssysglmv epskfpvtys dmsahdspyp
      361 kqqqrgnsws smptttytsa sslssqliks hhymktmlik tdlsnkcqim epned
//
LOCUS       XP_060994215             544 aa            linear   MAM 02-DEC-2023
DEFINITION  chromodomain Y-like protein isoform X1 [Dama dama].
ACCESSION   XP_060994215
VERSION     XP_060994215.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138232.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870975) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..544
                     /product="chromodomain Y-like protein isoform X1"
                     /calculated_mol_wt=60587
     Region          6..57
                     /region_name="CD_CDY"
                     /note="chromodomain of the Chromodomain Y-like protein
                     family; cd18634"
                     /db_xref="CDD:349284"
     Site            order(7..11,27,29..32,36,38..41,43..44,51,54..55)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:349284"
     Region          290..486
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cd06558"
                     /db_xref="CDD:119339"
     Site            order(310,312,343,347..351,394,396..398,420..421,424)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:119339"
     Site            order(349,398)
                     /site_type="active"
                     /note="oxyanion hole (OAH) forming residues [active]"
                     /db_xref="CDD:119339"
     Site            order(378,386,407..410,422..425,431,433..435,437..438,
                     443..444,446..447,449..450,453,464,467,482,485..486)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:119339"
     CDS             1..544
                     /gene="LOC133053709"
                     /coded_by="XM_061138232.1:1..1635"
                     /db_xref="GeneID:133053709"
ORIGIN      
        1 maseelydve rvidkrqnkk gkteyvvqwk gygredatwe peqhlvscee cihdfnrqht
       61 gkqkegtltr akrtspnngq nqisrsinss fsktapkalv vdkeheakss ppftasqkfq
      121 essarglaty kymdlaqlgn rilvpkspik sgtvldsfqd espenpdpmk qgpedtaape
      181 aaaekqigdl lspgaepvmm gsrpwihpll prasgpvkaa matglamkgn gtsdlvdalp
      241 vnctsplqts vmgmkagkkk fmkdrqdqpf nkqlrfsvrq restyryrdi vvrkqdgfth
      301 illstkssen nslnpevmke lqralsmana ddsklvllsa vgsvfccgld flyfirrlpd
      361 nrkresarma eairnfvntf iqfkkpivva vngpaiglga silplcdvvw anekawfqtp
      421 yttfgqspdg cstvmfpkim ggasanemlf rgrkltaqea cskglvsqvf wpgtftqevm
      481 vriqelascn rvvleeskal vrcnmrlele ranerecevl kkiwgsaqgi dsmrkylkck
      541 tddf
//
LOCUS       XP_060994216             522 aa            linear   MAM 02-DEC-2023
DEFINITION  chromodomain Y-like protein isoform X2 [Dama dama].
ACCESSION   XP_060994216
VERSION     XP_060994216.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138233.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870975) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..522
                     /product="chromodomain Y-like protein isoform X2"
                     /calculated_mol_wt=58370
     Region          6..57
                     /region_name="CD_CDY"
                     /note="chromodomain of the Chromodomain Y-like protein
                     family; cd18634"
                     /db_xref="CDD:349284"
     Site            order(7..11,27,29..32,36,38..41,43..44,51,54..55)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:349284"
     Region          268..464
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cd06558"
                     /db_xref="CDD:119339"
     Site            order(288,290,321,325..329,372,374..376,398..399,402)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:119339"
     Site            order(327,376)
                     /site_type="active"
                     /note="oxyanion hole (OAH) forming residues [active]"
                     /db_xref="CDD:119339"
     Site            order(356,364,385..388,400..403,409,411..413,415..416,
                     421..422,424..425,427..428,431,442,445,460,463..464)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:119339"
     CDS             1..522
                     /gene="LOC133053709"
                     /coded_by="XM_061138233.1:1..1569"
                     /db_xref="GeneID:133053709"
ORIGIN      
        1 maseelydve rvidkrqnkk gkteyvvqwk gygredatwe peqhlvscee cihdfnrqht
       61 gkqkegtltr akrtspnngq nqisrsinss fsktapkalv vdkeheakss ppftasqkfq
      121 essarglaty kymdlaqlgn rilvpkspik sgtvldsfqd espenpdpmk qgpedtaape
      181 aaaekqigdl lspgaepvmm gsrpwihpll prasgpvkaa matglamkgk gmkagkkkfm
      241 kdrqdqpfnk qlrfsvrqre styryrdivv rkqdgfthil lstkssenns lnpevmkelq
      301 ralsmanadd sklvllsavg svfccgldfl yfirrlpdnr kresarmaea irnfvntfiq
      361 fkkpivvavn gpaiglgasi lplcdvvwan ekawfqtpyt tfgqspdgcs tvmfpkimgg
      421 asanemlfrg rkltaqeacs kglvsqvfwp gtftqevmvr iqelascnrv vleeskalvr
      481 cnmrlelera nerecevlkk iwgsaqgids mrkylkcktd df
//
LOCUS       XP_060994217             544 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: chromodomain Y-like protein [Dama dama].
ACCESSION   XP_060994217
VERSION     XP_060994217.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138234.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870975) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..544
                     /product="LOW QUALITY PROTEIN: chromodomain Y-like
                     protein"
                     /calculated_mol_wt=60452
     Region          6..57
                     /region_name="CD_CDY"
                     /note="chromodomain of the Chromodomain Y-like protein
                     family; cd18634"
                     /db_xref="CDD:349284"
     Site            order(7..11,27,29..32,36,38..41,43..44,51,54..55)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:349284"
     Region          290..486
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cd06558"
                     /db_xref="CDD:119339"
     Site            order(310,312,343,347..351,394,396..398,420..421,424)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:119339"
     Site            order(349,398)
                     /site_type="active"
                     /note="oxyanion hole (OAH) forming residues [active]"
                     /db_xref="CDD:119339"
     Site            order(378,386,407..410,422..425,431,433..435,437..438,
                     443..444,446..447,449..450,453,464,467,482,485..486)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:119339"
     CDS             1..544
                     /gene="LOC133053710"
                     /coded_by="XM_061138234.1:1..1635"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /db_xref="GeneID:133053710"
ORIGIN      
        1 maseelydve rvidkrqnkk gkteyvvqwk gygredatwe peqhlvncee cihdfnrqht
       61 gkqkxgnltr akqttpnngq nqisrstnss fskaapkalv vgkeheakss ppftasqkfq
      121 essarglaty kymdlarlgn rilvpkspik sgtvldsfqd espenpdpvk qgpedtaape
      181 aaaekqigdl lspepepvmm gsrpwihpll prasgpvkat matglamkgn gtsdlvdalp
      241 vnctsplqts vmgmkagkkk fmkdrqdqpf nkqlrfsvwq rksayryrdi vvrkqdgfth
      301 illstkssen nslnpevmke lqralsmana ddsnlvllsa vgsvfccgld flyfirrlpd
      361 nckresarma eairnfvnif iqfkkpivva vngpaiglga silplcdvvw anekawfqtp
      421 yttfgqspdg cstvmfpkim ggasanemlf rgrkltaqea cskglvsqvf wpgtftqevm
      481 vrikelascn rvvleeskal vrcnmrlele ranerecevl kkiwgsaqgi dsmrkylkck
      541 tddf
//
LOCUS       XP_060994218             454 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box/WD repeat-containing protein 2-like [Dama dama].
ACCESSION   XP_060994218
VERSION     XP_060994218.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138235.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870980) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..454
                     /product="F-box/WD repeat-containing protein 2-like"
                     /calculated_mol_wt=51268
     Region          55..94
                     /region_name="F-box_FBXW2"
                     /note="F-box domain found in F-box/WD repeat-containing
                     protein 2 (FBXW2) and similar proteins; cd22131"
                     /db_xref="CDD:438903"
     Site            order(60,64,67..68,71..72,76,78..79,83..85,87)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438903"
     Region          140..447
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(147,163,167,173..174,186..187,201,205,211..212,
                     224..225,242,247,253..254,267,294,297,304..305,320..321,
                     340,344,350..351,362,379,384,390..391,418..419,437,442)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          151..185
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          188..223
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          229..265
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          281..319
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          377..417
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          423..445
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..454
                     /gene="LOC133053711"
                     /coded_by="XM_061138235.1:32..1396"
                     /db_xref="GeneID:133053711"
ORIGIN      
        1 merkdfetwl dnisvtflsl tdlqknetld hlislsgavq lrhlsnnlet llnrdfltll
       61 plelsfyllk wldpqtlltc clvskqwnkv isactevwqt acknlgwqid dsvqdalhwk
      121 kvylkailrm kqledheafe tsslighsar vyalyykdgl lctgsddlsa klwdvstgqc
      181 vygiqthtca avkfdeqklv tgsfdntvac wewssgartq hfrghtgavf svdyndeldv
      241 lvsgsadftv kvwalsagtc lntltghtew vtkvvlqkck vksllhspgd yillsadkye
      301 ikiwpigrei nckclktlsv sedrsiclqp slhfdgkyiv cssalglyqw dfasydilrv
      361 iktpeianla llgfgdifal lfdnrylyil dlwteslisr wplpeyrksk rgssflagea
      421 swlngldghn dtglvfatsm pdhsihlvlw kqhg
//
LOCUS       XP_060994219             462 aa            linear   MAM 02-DEC-2023
DEFINITION  elongation factor 1-alpha 1 [Dama dama].
ACCESSION   XP_060994219
VERSION     XP_060994219.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138236.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870982) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..462
                     /product="elongation factor 1-alpha 1"
                     /calculated_mol_wt=50010
     Region          1..460
                     /region_name="PTZ00141"
                     /note="elongation factor 1- alpha; Provisional"
                     /db_xref="CDD:185474"
     Site            14..21
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206670"
     Site            order(15,17,21..22,25,28..29,76..77,95..96,119..120,169,
                     173)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206670"
     Site            order(17,19..22,153..154,156,194..196)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206670"
     Site            order(21,64,67..68,70,72,74..76,78,89,91,93..95,97,100)
                     /site_type="other"
                     /note="EF1Balpha binding site [polypeptide binding]"
                     /db_xref="CDD:206670"
     Site            66..76
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206670"
     Site            72
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206670"
     Site            91..94
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206670"
     Site            93..111
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206670"
     Site            153..156
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206670"
     Site            194..196
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206670"
     CDS             1..462
                     /gene="LOC133053712"
                     /coded_by="XM_061138236.1:69..1457"
                     /db_xref="GeneID:133053712"
ORIGIN      
        1 mgkekthini vvighvdsgk stttghliyk cggidkrtie kfekeaaemg kgsfkyawvl
       61 dklkaererg itidislwkf etskyyvtii dapghrdfik nmitgtsqad cavlivaagv
      121 gefeagiskn gqtrehalla ytlgvkqliv gvnkmdstep pysqkryeei vkevstyikk
      181 igynpdtvaf vpisgwngdn mlepsanmpw fkgwkvtrkd gnasgttlle aldcilpptr
      241 ptdkplrlpl qdvykiggig tvpvgrvetg vlkpgmvvtf apvnvttevk svemhheals
      301 ealpgdnvgf nvknvsvkdv rrgnvagdsk ndppmeaagf taqviilnhp gqisagyapv
      361 ldchtahiac kfaelkekid rrsgkkledg pkflksgdaa ivdmvpgkpm cvesfsdypp
      421 lgrfavrdmr qtvavgvika vdkkaagagk vtksaqkaqk ak
//
LOCUS       XP_060994220             462 aa            linear   MAM 02-DEC-2023
DEFINITION  elongation factor 1-alpha 1 [Dama dama].
ACCESSION   XP_060994220
VERSION     XP_060994220.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138237.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870982) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..462
                     /product="elongation factor 1-alpha 1"
                     /calculated_mol_wt=50010
     Region          1..460
                     /region_name="PTZ00141"
                     /note="elongation factor 1- alpha; Provisional"
                     /db_xref="CDD:185474"
     Site            14..21
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206670"
     Site            order(15,17,21..22,25,28..29,76..77,95..96,119..120,169,
                     173)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206670"
     Site            order(17,19..22,153..154,156,194..196)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206670"
     Site            order(21,64,67..68,70,72,74..76,78,89,91,93..95,97,100)
                     /site_type="other"
                     /note="EF1Balpha binding site [polypeptide binding]"
                     /db_xref="CDD:206670"
     Site            66..76
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206670"
     Site            72
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206670"
     Site            91..94
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206670"
     Site            93..111
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206670"
     Site            153..156
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206670"
     Site            194..196
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206670"
     CDS             1..462
                     /gene="LOC133053714"
                     /coded_by="XM_061138237.1:69..1457"
                     /db_xref="GeneID:133053714"
ORIGIN      
        1 mgkekthini vvighvdsgk stttghliyk cggidkrtie kfekeaaemg kgsfkyawvl
       61 dklkaererg itidislwkf etskyyvtii dapghrdfik nmitgtsqad cavlivaagv
      121 gefeagiskn gqtrehalla ytlgvkqliv gvnkmdstep pysqkryeei vkevstyikk
      181 igynpdtvaf vpisgwngdn mlepsanmpw fkgwkvtrkd gnasgttlle aldcilpptr
      241 ptdkplrlpl qdvykiggig tvpvgrvetg vlkpgmvvtf apvnvttevk svemhheals
      301 ealpgdnvgf nvknvsvkdv rrgnvagdsk ndppmeaagf taqviilnhp gqisagyapv
      361 ldchtahiac kfaelkekid rrsgkkledg pkflksgdaa ivdmvpgkpm cvesfsdypp
      421 lgrfavrdmr qtvavgvika vdkkaagagk vtksaqkaqk ak
//
LOCUS       XP_060994221             268 aa            linear   MAM 02-DEC-2023
DEFINITION  testis-specific Y-encoded protein 3-like [Dama dama].
ACCESSION   XP_060994221
VERSION     XP_060994221.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138238.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870983) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..268
                     /product="testis-specific Y-encoded protein 3-like"
                     /calculated_mol_wt=31001
     Region          117..261
                     /region_name="PTZ00007"
                     /note="(NAP-L) nucleosome assembly protein -L;
                     Provisional; cl08298"
                     /db_xref="CDD:471807"
     CDS             1..268
                     /gene="LOC133053715"
                     /coded_by="XM_061138238.1:1..807"
                     /db_xref="GeneID:133053715"
ORIGIN      
        1 mqapggvpse eatlywveav eegatleege isgigqevql lvldvmeeve lvvyeeqeqv
       61 sseeqcqehp rpgapsdqpa lealatlqle lepvnkkaqr vharlkhknc qrrmlnlehr
      121 saitqgirgf wikvftnpqm sclmtkqeqd mlhfmtnlkv eelwhpthhc mitlsfqrnr
      181 yfqkevivkk ylinvtgkry qvscstpiqw hqgferkays rrnhnssvnf fnwlsdhsft
      241 gsdqiaevii kdlwpnplqy yvrrkapa
//
LOCUS       XP_060994222             415 aa            linear   MAM 02-DEC-2023
DEFINITION  heat shock transcription factor, Y-linked-like [Dama dama].
ACCESSION   XP_060994222
VERSION     XP_060994222.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138239.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870983) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..415
                     /product="heat shock transcription factor, Y-linked-like"
                     /calculated_mol_wt=46896
     Region          80..194
                     /region_name="HSF_DNA-bind"
                     /note="HSF-type DNA-binding; pfam00447"
                     /db_xref="CDD:459813"
     CDS             1..415
                     /gene="LOC133053716"
                     /coded_by="XM_061138239.1:1..1248"
                     /db_xref="GeneID:133053716"
ORIGIN      
        1 mahisseiqd vppkdestgs etsirsslyd ctltgdkvlr smveeyafqa lyeevvikrp
       61 rytfsvsetd evnaplppgf pqklwaives dqfesiwwde sgtcivinee hfkkevlerk
      121 apfrvletns mkslvqqlnl ygfskkrptf qrsaslpyfl eeennislls klhiyynpnf
      181 krgypqllvr mkrrvginnv spisslvrdy ktkhvkarvn tddhnsdflp etsgesafsa
      241 stslsvpfiq npytsqrvan tsalppcdlp spssisvrqr eqivvdqpav lnqvsifnwh
      301 shssytqvng qlediatttt ptsqnpivsp sqssysglmv epskfpvtyn dmsahespyp
      361 nqqqrgnsws smptttytsa sslsnqfiks hhymktmlik tdlsnkcqim epned
//
LOCUS       XP_060994224             543 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: chromodomain Y-like protein [Dama dama].
ACCESSION   XP_060994224
VERSION     XP_060994224.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138241.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870983) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..543
                     /product="LOW QUALITY PROTEIN: chromodomain Y-like
                     protein"
                     /calculated_mol_wt=60422
     Region          6..56
                     /region_name="CD_CDY"
                     /note="chromodomain of the Chromodomain Y-like protein
                     family; cd18634"
                     /db_xref="CDD:349284"
     Site            order(7..11,27,29..32,36,38..41,43..44,51,54..55)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:349284"
     Region          289..485
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cd06558"
                     /db_xref="CDD:119339"
     Site            order(309,311,342,346..350,393,395..397,419..420,423)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:119339"
     Site            order(348,397)
                     /site_type="active"
                     /note="oxyanion hole (OAH) forming residues [active]"
                     /db_xref="CDD:119339"
     Site            order(377,385,406..409,421..424,430,432..434,436..437,
                     442..443,445..446,448..449,452,463,466,481,484..485)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:119339"
     CDS             1..543
                     /gene="LOC133053720"
                     /coded_by="XM_061138241.1:1..1632"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /db_xref="GeneID:133053720"
ORIGIN      
        1 maseelyeve riidkrqnkk gkteyvvqwk gygredatwe peqhlvncee cihdfnwqht
       61 gkqkegtltr akwtspnngq nqisrstnss fskaapkalv vgkeheakss plftasqkfq
      121 essarglaty knmdlarlgn rilvpkspik sgtvldsfqd espenpdpme qgpedtvape
      181 aaaekwigal lslgaeqvmm rsrpwihpll pqasgpvkaa matglamkgn gtsdlvdalp
      241 vnctrllqts vmgmkagkkf mkdrrdqpfn kqlrfsvrqr esayryrdiv vqkqdgfthi
      301 llstkssenn slnpevveel qsalsmanay dsklvllsav gsvfccsldf lyfiqrlpdd
      361 rkresatmae airnfvntfi qfkkpivvav ngpaiglgas ilplcdvvwa nekawfxtpy
      421 ttfgqspdgc stvmfpkimg gastnemlfr grkltaqeac skglvsqvfw lgtftqevmv
      481 rikeltscnr vvleeskalv hcnmrlkler anerecevlk kiwgsaqgid smlkylkskm
      541 dgf
//
LOCUS       XP_060994225             543 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: chromodomain Y-like protein [Dama dama].
ACCESSION   XP_060994225
VERSION     XP_060994225.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138242.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870983) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..543
                     /product="LOW QUALITY PROTEIN: chromodomain Y-like
                     protein"
                     /calculated_mol_wt=60322
     Region          6..56
                     /region_name="CD_CDY"
                     /note="chromodomain of the Chromodomain Y-like protein
                     family; cd18634"
                     /db_xref="CDD:349284"
     Site            order(7..11,27,29..32,36,38..41,43..44,51,54..55)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:349284"
     Region          289..485
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cd06558"
                     /db_xref="CDD:119339"
     Site            order(309,311,342,346..350,393,395..397,419..420,423)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:119339"
     Site            order(348,397)
                     /site_type="active"
                     /note="oxyanion hole (OAH) forming residues [active]"
                     /db_xref="CDD:119339"
     Site            order(377,385,406..409,421..424,430,432..434,436..437,
                     442..443,445..446,448..449,452,463,466,481,484..485)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:119339"
     CDS             1..543
                     /gene="LOC133053721"
                     /coded_by="XM_061138242.1:1..1632"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /db_xref="GeneID:133053721"
ORIGIN      
        1 maseelyeve riidkrqnkk gkteyvvqwk gygredatwe peqhlvncee cihdfnwqht
       61 gkqkegtltr akwtspnngq nqisrstnss fskaapkalv vgkeheakss plftasqkfq
      121 essarglaty knmdlarlgn rilvpkspik sgtvldsfqd espenpdpme qgpedtvape
      181 aaaekwigal lslgaeqvmm rsrpwihpll pqasgpvkaa matglamkgn gtsdlvdalp
      241 vnctrllqts vmgmkagkkf mkdrrdqpfn kqlcfsvrqr esayryqdiv vqkqdgfthi
      301 llstkssenn slnpevveel qsalsmanay dsklvllsav gsvfccsldf lyfiqrlpdd
      361 rkresatmae airnfvntfi qfkkpivvav ngpaiglgas ilplcdvvwa nekawfxtpy
      421 ttfgqspdgc stvmfpkimg gastnemlfr grkltaqeac skglvsqvfw lgtftqevmv
      481 rikeltscnr vvleeskalv hcnmrlkler anerecevlk kiwgsaqgid smlkylkski
      541 dgf
//
LOCUS       XP_060994226            1107 aa            linear   MAM 02-DEC-2023
DEFINITION  histone-lysine N-methyltransferase PRDM9-like [Dama dama].
ACCESSION   XP_060994226
VERSION     XP_060994226.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138243.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870984) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 22% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1107
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1107
                     /product="histone-lysine N-methyltransferase PRDM9-like"
                     /calculated_mol_wt=124702
     Region          27..85
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          171..201
                     /region_name="SSXRD"
                     /note="SSXRD motif; pfam09514"
                     /db_xref="CDD:430657"
     Region          240..368
                     /region_name="PR-SET_PRDM7_9"
                     /note="PR-SET domain found in PR domain zinc finger
                     protein 7 (PRDM7) and 9 (PRDM9) and similar proteins;
                     cd19193"
                     /db_xref="CDD:380970"
     Site            order(253,256..258,276,287..288,290..294,304,317..321,323,
                     332..333,357..358,360..361,364..365)
                     /site_type="active"
                     /db_xref="CDD:380970"
     Site            order(253,256..258,290..291,317..321,323,357,361,365)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380970"
     Region          <370..679
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          524..543
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          547..>874
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          551..571
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          579..599
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          607..627
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(612,614,616,618..619,622..623,626,640,642,646..647,
                     650..651,654,668,670,672,674..675,678..679,682)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          635..655
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(635,638,651,655)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          663..683
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          691..711
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          719..739
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(724,726,728,730..731,734..735,738,752,754,758..759,
                     762..763,766,780,782,784,786..787,790..791,794)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          747..767
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(747,750,763,767)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          775..795
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          803..823
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          831..851
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..1107
                     /gene="LOC133053722"
                     /coded_by="XM_061138243.1:1..3324"
                     /db_xref="GeneID:133053722"
ORIGIN      
        1 mrpnrspees tegdakrtew kpmvrdafkd isvyfskeew eemgewekir yrnvkrnyev
       61 liaigfratq ptfmhhrrqv ikpqvddted sdeewtprqq gipssmafrv ehskhqkrms
      121 raplskessl kelpgaakll ktsgskqaqk pvphhrkart pgqhprqnve lrrketgvkr
      181 yslqerkghm yqeviepqdd dylyceecqn ffidscaahg pptfvkdcav ekghanrsal
      241 tlppglsirl sgipdaglgv wngasdlplg lhfgpyegqi tddeeaansg yawlitkrrn
      301 cykyvdgkdm swanwmryvn cardneeqnl vafqyhgqif yrtcqvirpg cellvwyrde
      361 ygqdlgikwn srgkselatg repkpkshpc ascslafssq kflsphfqrs hpsqtllrps
      421 erdllqpedp cpgnqnqrys nphspsdkpe gqeakdrpqq llksirlkri srassysprg
      481 qmggsgvher mkdepstsqk lnpedtgtll tgagvsgiir vtykecgqgs kdrpsltthe
      541 rthtgekpyv cgecgrsfhh gsvlirhqrt htgekpyvcg ecgqsfhhgs nfithqrtht
      601 gekpyvcgec grsfsknfnl ithqrthtge kpyvcgecgr sfsqksdfit hqrthtgekp
      661 yvcggcgqsf sqksdfirhq rthtgekpyv cgeggqsfsq ksafiihqrt htgekpyvcg
      721 ecgrsfrqks aliihqrtht gekpyvcgec grsfsdksnl ishqrthtge kpyvctecgr
      781 sfiqksvlir hqrthtgekp yvcrecgrsf srksilirhq rthtgektyv crecgqsfsq
      841 ksllithqrt htgekpyghh siwtpdstte vqfsalpsaa agqappdtgt alhghtrhqq
      901 swdgqpvasa acstlttaap rlyqprlcaa lldcqglgtl afslyraphq pllcsprrlc
      961 fglmtkflfe lreeeeqgcv aggifwpsve vllppvptwv sgggretgls fpspaqrmtk
     1021 arsqkweqgg qseswvsqgp ceegftaawi plgwfsfcvv ftsnhkdeav qvptaslvqv
     1081 lttlliyygq gdrvagvtlp wtreetp
//
LOCUS       XP_060994227             308 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4C3D-like [Dama dama].
ACCESSION   XP_060994227
VERSION     XP_060994227.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138244.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870984) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..308
                     /product="olfactory receptor 4C3D-like"
                     /calculated_mol_wt=34582
     Region          39..292
                     /region_name="7tmA_OR4A-like"
                     /note="olfactory receptor 4A and related proteins, member
                     of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15939"
                     /db_xref="CDD:320605"
     Region          60..86
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320605"
     Site            order(82,85..86,98..103,105..106,109,154,156..160,196,
                     199..201,203..205,207..208,252,255..256,258..259,262,
                     266..267,269..271,274,277..278)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320605"
     Region          98..128
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320605"
     Region          141..162
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320605"
     Region          196..226
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320605"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320605"
     Region          267..292
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320605"
     CDS             1..308
                     /gene="LOC133053723"
                     /coded_by="XM_061138244.1:1..927"
                     /db_xref="GeneID:133053723"
ORIGIN      
        1 mdvlrppnnv tefvllgltq nphlqnilfi vflfiflftv vanlliviti sfsptlsapm
       61 yffltylafi dtfytsattp kmtidllyqr rtiswhgcla qlflvhflgg seitvlivma
      121 ydryvgickp lhymtitrqe vcqllavval iggilhatvq ilftvdltfc ghhvmdhfmc
      181 dffslldiac shthtlgmvv aansgamcll ifflllisyi vilsslkshg segrrkalst
      241 cgsdftvval yfvpcifsym rpvttypgdk lvsvffiilt pmlnpiiytv rntdvknamw
      301 sllkrrva
//
LOCUS       XP_060994228             307 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4C3D-like [Dama dama].
ACCESSION   XP_060994228
VERSION     XP_060994228.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138245.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870984) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..307
                     /product="olfactory receptor 4C3D-like"
                     /calculated_mol_wt=34291
     Region          25..291
                     /region_name="7tmA_OR4A-like"
                     /note="olfactory receptor 4A and related proteins, member
                     of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15939"
                     /db_xref="CDD:320605"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320605"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320605"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320605"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320605"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320605"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320605"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320605"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320605"
     CDS             1..307
                     /gene="LOC133053724"
                     /coded_by="XM_061138245.1:1..924"
                     /db_xref="GeneID:133053724"
ORIGIN      
        1 mdpmsphnvt kfvllgltqn phlqkilfiv flfillftvl anllivitis lsptlsapmy
       61 fflthlsfld asltsvttpk liidllyqrt tiswgacltq lfmehflags evtilivmay
      121 dryvaickpl hyttimrqgl crllvvvvwt ggilhatvqi lftmdlifcg pnvidhfmcd
      181 ffsllelacn styrlgivva antggmclli fsmllisyav ilsslkshgs egrrkalstc
      241 aahftvvvms fvpciftytr pvavyptdkw vtvffailtp mfnpiiytvr nievktairn
      301 llkrgvi
//
LOCUS       XP_060994229             755 aa            linear   MAM 02-DEC-2023
DEFINITION  collagen alpha-1(I) chain-like [Dama dama].
ACCESSION   XP_060994229
VERSION     XP_060994229.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138246.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870984) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..755
                     /product="collagen alpha-1(I) chain-like"
                     /calculated_mol_wt=78720
     CDS             1..755
                     /gene="LOC133053728"
                     /coded_by="XM_061138246.1:1..2268"
                     /db_xref="GeneID:133053728"
ORIGIN      
        1 mhglifetsi cywqdqpgrg astrsrvcre qgggwwpgtr ascssgraqk trearkrgeg
       61 gvvgkaptrp tgphtrgeda rsrtqpsvhe ghsaprrppp regtrggarr aplllrtppp
      121 prrgparpgg pgsragdprp ghaadgrral krpsvpptpe grgtpgsedt atgpreadrg
      181 pdprsgqrig aggaaggagg rvgggrgrsp spsprrrrrt ggggkagnrs gprqargset
      241 rqgaapgssr wgadrggrtd grrrartgcs hvtptpqnrr wrrgwprata rgmaqndpge
      301 asqppgrtag ahpsrgltpt anpthpepqp aqenalpprt ggphsphtrn pavrakappa
      361 pppsqgsegp appgdatgrr rpgddthvrr grlgprprgt gvegdtggrt rgtrrkagsg
      421 gegpastrkq gsrdggegaa rrpentrtqp ghqenqrgip ppptheggpt tpgtpaapgh
      481 pwsgphtpap ppgpacrppt flhpsilnrs vfrlsltprl nilgthsrar aaqtggpphr
      541 hrlrlrgkgg hdrlllttaa glgepgptrq shpnppafpl gshhgagcah taharpptrr
      601 tpggarrdpp ptqrgearaa vgnksstrph rgagapitpl phrgeggfsa hvlwqsprwp
      661 lhtregqqlg gpepplnwag gvcgigkrat tqervrgsgp pgkaspvsrh negsaqcfsy
      721 rldpppmght httaagtrgg hrvkgkrhhh sasgt
//
LOCUS       XP_060994230             351 aa            linear   MAM 02-DEC-2023
DEFINITION  testis-specific Y-encoded protein 3-like [Dama dama].
ACCESSION   XP_060994230
VERSION     XP_060994230.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138247.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870984) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 9% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..351
                     /product="testis-specific Y-encoded protein 3-like"
                     /calculated_mol_wt=39011
     CDS             1..351
                     /gene="LOC133053729"
                     /coded_by="XM_061138247.1:1..1056"
                     /db_xref="GeneID:133053729"
ORIGIN      
        1 mesetgpgeg sitpgswilv vsagpqegga lgpsspvgaa esmqapggvp gveatlywve
       61 aveegaalee gevsgmgqdv qllvldvmee velvvyeeqe qvsseeqgqe larpgapsdr
      121 palealaalq lemepvnkqa eraharlkhk nchrrtlhle hrsaiirgir gfwvevftnh
      181 pqrsrmmtnq erdmrhfmtk lkveevrhpt hhctftlyfq rnryfpnevv vkeyliilsl
      241 slhpiplpiq whqgfeckac ccrhhnssvn ffnwlsdhsf tgsdwiaeii ikdlwpnplq
      301 ycvsrkappq evlggreilq regnmgralt gyappslgmg ecsgepgkel p
//
LOCUS       XP_060994231             305 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4A15-like [Dama dama].
ACCESSION   XP_060994231
VERSION     XP_060994231.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138248.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870984) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..305
                     /product="olfactory receptor 4A15-like"
                     /calculated_mol_wt=34350
     Region          23..289
                     /region_name="7tmA_OR4A-like"
                     /note="olfactory receptor 4A and related proteins, member
                     of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15939"
                     /db_xref="CDD:320605"
     Region          24..50
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320605"
     Region          57..83
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320605"
     Site            order(79,82..83,95..100,102..103,106,151,153..157,193,
                     196..198,200..202,204..205,249,252..253,255..256,259,
                     263..264,266..268,271,274..275)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320605"
     Region          95..125
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320605"
     Region          138..159
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320605"
     Region          193..223
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320605"
     Region          229..259
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320605"
     Region          264..289
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320605"
     CDS             1..305
                     /gene="LOC133053733"
                     /coded_by="XM_061138248.1:1..918"
                     /db_xref="GeneID:133053733"
ORIGIN      
        1 meqrnnvtef vllgltqsvq gqrilfvvfl liylvtmmgn lliiltvvfs ptlhvpmyff
       61 lgylsfldgv ysttvtpnmi idllcekkti sfqacmiqlf ighlfggadi illvvmaydr
      121 yvaickplhy ltimnkqvci llllltlvgg flhgvlhplf vynlrycgpn vidhficdmy
      181 pliklacsdt yitvltvlan dgaislvift lllisygvil hslknvsqeg rhkalstcgs
      241 hitvvllffv pstftyvrpp ctlpidkylt vfytivtpml npliytlrng emknamkklw
      301 irkgk
//
LOCUS       XP_060994232             389 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA-binding motif protein, X chromosome-like [Dama dama].
ACCESSION   XP_060994232
VERSION     XP_060994232.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138249.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870984) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..389
                     /product="RNA-binding motif protein, X chromosome-like"
                     /calculated_mol_wt=42763
     Region          7..86
                     /region_name="RRM_RBMX_like"
                     /note="RNA recognition motif (RRM) found in heterogeneous
                     nuclear ribonucleoprotein G (hnRNP G), Y chromosome RNA
                     recognition motif 1 (hRBMY), testis-specific heterogeneous
                     nuclear ribonucleoprotein G-T (hnRNP G-T) and similar
                     proteins; cd12382"
                     /db_xref="CDD:409816"
     Site            order(9,11,13..17,38,40..43,45..51,53,78,80,82..86)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:409816"
     Region          <10..202
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     CDS             1..389
                     /gene="LOC133053735"
                     /coded_by="XM_061138249.1:1..1170"
                     /db_xref="GeneID:133053735"
ORIGIN      
        1 mmeadrpgkl figglsaett kkcleaefgk ygrivevlli kdrntnksrg fafitfespa
       61 dgkdaakemn gkfldgkaik veqankpsfe sggrqrqrps arnrghprnq rcqrgrigga
      121 rgrvsrgghf gddgyslnms ssrvpypvkr gpssscegps pkrsapsaqg rsssgmrgqg
      181 pelrrenyrg gprrklvssr rdnyvsprdd gyatkdgysg rdypssrdtk dyappsrdya
      241 yrdyghsssr ddhssrghsd rdgyggsrdr dysehrsggs ykdsyksygg shgapsgrgp
      301 plsygrssry ddysttrdry gggwksysss rsdaylsgrd rggrqergfp sskdrvypap
      361 hesysssgre assgghggsr servgrnry
//
LOCUS       XP_060994233             305 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4A15-like [Dama dama].
ACCESSION   XP_060994233
VERSION     XP_060994233.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138250.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870984) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..305
                     /product="olfactory receptor 4A15-like"
                     /calculated_mol_wt=34153
     Region          23..289
                     /region_name="7tmA_OR4A-like"
                     /note="olfactory receptor 4A and related proteins, member
                     of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15939"
                     /db_xref="CDD:320605"
     Region          24..50
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320605"
     Region          57..83
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320605"
     Site            order(79,82..83,95..100,102..103,106,151,153..157,193,
                     196..198,200..202,204..205,249,252..253,255..256,259,
                     263..264,266..268,271,274..275)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320605"
     Region          95..125
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320605"
     Region          138..159
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320605"
     Region          193..223
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320605"
     Region          229..259
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320605"
     Region          264..289
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320605"
     CDS             1..305
                     /gene="LOC133053736"
                     /coded_by="XM_061138250.1:1..918"
                     /db_xref="GeneID:133053736"
ORIGIN      
        1 meqrnnvtef vllglsqsvq gqkilfvifl liyivtmvgn llivmnvvvs smrnapmyff
       61 lgylsfmnav ysttvtpnmi iallcekkti sfqacmtklf ighlfggadl cplvvmaydr
      121 yvaickplhy ltimnkrvca lllllawvgg llhavihpls vynlpycgpn vidhficdry
      181 lllelactdt hvialialan dgaicmaift lllisygvil yslknlsqeg rrkasstcgs
      241 hitvvllffv pciftyvrpp stlsidkslt vfytiitpml npliytlrng elknamkklw
      301 irkrk
//
LOCUS       XP_060994234             308 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4C3D-like [Dama dama].
ACCESSION   XP_060994234
VERSION     XP_060994234.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138251.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870984) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..308
                     /product="olfactory receptor 4C3D-like"
                     /calculated_mol_wt=34267
     Region          26..292
                     /region_name="7tmA_OR4A-like"
                     /note="olfactory receptor 4A and related proteins, member
                     of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15939"
                     /db_xref="CDD:320605"
     Region          27..53
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320605"
     Region          60..86
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320605"
     Site            order(82,85..86,98..103,105..106,109,154,156..160,196,
                     199..201,203..205,207..208,252,255..256,258..259,262,
                     266..267,269..271,274,277..278)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320605"
     Region          98..128
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320605"
     Region          141..162
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320605"
     Region          196..226
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320605"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320605"
     Region          267..292
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320605"
     CDS             1..308
                     /gene="LOC133053738"
                     /coded_by="XM_061138251.1:1..927"
                     /db_xref="GeneID:133053738"
ORIGIN      
        1 mepltssnnm tkflllgltq npqlqkilfv vllpiflftv lanlliviti slsptlsapm
       61 yfflthlsfi daiftsvttp klitdllhqr rtiswggclt qlfvehflgg vevivlivma
      121 ydryvaickp lhyatimqqg lckllavvaw iggtlhatvq ilftvdltfc gsnvidrfmc
      181 dffsllklac shtytlgmvv aantggmcll ifflllisyi vilsclkshg skgrrkalst
      241 cgshftvvvl lfvpcifthm rpvatypadk wvtvfyailc pmlnpiiytv rnaevkvamr
      301 sllkrrvt
//
LOCUS       XP_060994235             309 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4C46-like [Dama dama].
ACCESSION   XP_060994235
VERSION     XP_060994235.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138252.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026870984) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..309
                     /product="olfactory receptor 4C46-like"
                     /calculated_mol_wt=34620
     Region          23..289
                     /region_name="7tmA_OR4A-like"
                     /note="olfactory receptor 4A and related proteins, member
                     of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15939"
                     /db_xref="CDD:320605"
     Region          24..50
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320605"
     Region          57..83
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320605"
     Site            order(79,82..83,95..100,102..103,106,151,153..157,193,
                     196..198,200..202,204..205,249,252..253,255..256,259,
                     263..264,266..268,271,274..275)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320605"
     Region          95..125
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320605"
     Region          138..159
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320605"
     Region          193..223
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320605"
     Region          229..259
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320605"
     Region          264..289
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320605"
     CDS             1..309
                     /gene="LOC133053739"
                     /coded_by="XM_061138252.1:1..930"
                     /db_xref="GeneID:133053739"
ORIGIN      
        1 menrnnvtef vllglsqnpk mqktifvvfl ivyivsivgn vltmvsikas sllespmyyf
       61 lvhlsfidac yscvntskvi idslyekkrs pfyecmmqif gehlfagadi illtamaydr
      121 yvaickplhy ttimnwqvcg llvgvsrvgg flhatiqilf imklpfcgpn vidhfmcdln
      181 plldlactdt htlglfvaan sgficllnfl lligsyavil hslktqslea rqkalstcvs
      241 hitavvfffl pcifeylrpa tslpidkava ifytmitpml npliytlrnd qmknairklc
      301 srkvisgdq
//
LOCUS       XP_060994236             261 aa            linear   MAM 02-DEC-2023
DEFINITION  testis-specific Y-encoded protein 3-like [Dama dama].
ACCESSION   XP_060994236
VERSION     XP_060994236.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138253.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026871000) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..261
                     /product="testis-specific Y-encoded protein 3-like"
                     /calculated_mol_wt=29993
     Region          117..261
                     /region_name="PTZ00007"
                     /note="(NAP-L) nucleosome assembly protein -L;
                     Provisional; cl08298"
                     /db_xref="CDD:471807"
     CDS             1..261
                     /gene="LOC133053743"
                     /coded_by="XM_061138253.1:1..786"
                     /db_xref="GeneID:133053743"
ORIGIN      
        1 mqapggvpse eatlywveav eegatleege isgigqevql lvldvmeeve lvvyeeqeqv
       61 sseeqcqehp rpgapsdrpa lealatlqle lepvnkkaqr vharlkhknc qrrmlnlehr
      121 saitqgirgf wikvftnhpq msclmtkqdq dmlhfmtnlk veelqhpthh cmitlsfqrn
      181 tyfqkevivk kylinvtgkr yqvscstpiq shqgferkay shrnhkssvn ffnwlsdhsf
      241 tgsdqiaevi ikdlwpnplq y
//
LOCUS       XP_060994237             415 aa            linear   MAM 02-DEC-2023
DEFINITION  heat shock transcription factor, Y-linked-like [Dama dama].
ACCESSION   XP_060994237
VERSION     XP_060994237.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138254.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026871000) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..415
                     /product="heat shock transcription factor, Y-linked-like"
                     /calculated_mol_wt=46798
     Region          80..194
                     /region_name="HSF_DNA-bind"
                     /note="HSF-type DNA-binding; pfam00447"
                     /db_xref="CDD:459813"
     CDS             1..415
                     /gene="LOC133053747"
                     /coded_by="XM_061138254.1:1..1248"
                     /db_xref="GeneID:133053747"
ORIGIN      
        1 mahisseiqd vppkdestgs etsirsslyd ctltgdkvlr smveeyafqa lyeevvikrp
       61 rytfsvsetd evnaplppgf pqklwaives dqfesiwwde sgtcivinee lfkkevlerk
      121 apfrvletns mkslvrqlnl ygfskkrptf qrsaslpdfl eeennislls klhiyynpnf
      181 krgypqllvr mkrrvginnv spisslvrdy ktkhvkarvn tddhnsdflp etsgesafsa
      241 stslsvpfiq kpytsqrvan tsalppcdlp spssisvrqt eqilvdqppv lnqvsifnwh
      301 syssytqvng hlediatttt ptsqnpivsp sqssysglmv epskfpvtys dmsahdspyp
      361 kqqqrgnsws smptttytsa sslssqliks hhymktmlik tdlsnkcqim epned
//
LOCUS       XP_060994238             543 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: chromodomain Y-like protein [Dama dama].
ACCESSION   XP_060994238
VERSION     XP_060994238.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138255.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026871000) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..543
                     /product="LOW QUALITY PROTEIN: chromodomain Y-like
                     protein"
                     /calculated_mol_wt=60367
     Region          6..56
                     /region_name="CD_CDY"
                     /note="chromodomain of the Chromodomain Y-like protein
                     family; cd18634"
                     /db_xref="CDD:349284"
     Site            order(7..11,27,29..32,36,38..41,43..44,51,54..55)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:349284"
     Region          289..485
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cd06558"
                     /db_xref="CDD:119339"
     Site            order(309,311,342,346..350,393,395..397,419..420,423)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:119339"
     Site            order(348,397)
                     /site_type="active"
                     /note="oxyanion hole (OAH) forming residues [active]"
                     /db_xref="CDD:119339"
     Site            order(377,385,406..409,421..424,430,432..434,436..437,
                     442..443,445..446,448..449,452,463,466,481,484..485)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:119339"
     CDS             1..543
                     /gene="LOC133053749"
                     /coded_by="XM_061138255.1:1..1632"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /db_xref="GeneID:133053749"
ORIGIN      
        1 maseelyeve riidkrqnkk rkteyvvqwk gygredatwe peqhlvncee cihdfnwqht
       61 gkqkegtltr akwtspnngq nqisrstnss fskaapkalv vgeeheakss plftasqkfq
      121 essarglaty knmdlarlgn rilvpkspik sgtvldsfqd espenpdpme qgpedtvape
      181 aaaekwigal lslgaeqvmm gsrpwihplf pqasgpvkaa matglamkgn gtsdlvdalp
      241 vnctrplqts vmgmkagkkf mkdrrdqpfn kqlrfsvrqr esayryrdiv vqkqdgfthi
      301 llstkssenn slnpevvkel qsalsmanad dsnlvllsav gsvfccsldf lyfiqrlsdd
      361 rkresatmae airnfvntfi qfkkpivvav ngpaiglgas ilplcdvvwa nekawfxtpy
      421 ttfgqspdgc stvmfpkimg gastnemlfr grkltaqeac skglvsqvfw lgtftqevmv
      481 rikeltscnr vvleeskalv hcnmrlkler anerecevlk kiwgsaqgid smlkylkskm
      541 dgf
//
LOCUS       XP_060994239             544 aa            linear   MAM 02-DEC-2023
DEFINITION  chromodomain Y-like protein isoform X1 [Dama dama].
ACCESSION   XP_060994239
VERSION     XP_060994239.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138256.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026871000) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..544
                     /product="chromodomain Y-like protein isoform X1"
                     /calculated_mol_wt=60751
     Region          6..57
                     /region_name="CD_CDY"
                     /note="chromodomain of the Chromodomain Y-like protein
                     family; cd18634"
                     /db_xref="CDD:349284"
     Site            order(7..11,27,29..32,36,38..41,43..44,51,54..55)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:349284"
     Region          290..486
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cd06558"
                     /db_xref="CDD:119339"
     Site            order(310,312,343,347..351,394,396..398,420..421,424)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:119339"
     Site            order(349,398)
                     /site_type="active"
                     /note="oxyanion hole (OAH) forming residues [active]"
                     /db_xref="CDD:119339"
     Site            order(378,386,407..410,422..425,431,433..435,437..438,
                     443..444,446..447,449..450,453,464,467,482,485..486)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:119339"
     CDS             1..544
                     /gene="LOC133053750"
                     /coded_by="XM_061138256.1:1..1635"
                     /db_xref="GeneID:133053750"
ORIGIN      
        1 maseelydve rvidkrqnkk gkteyvvqwk gygredatwe peqhlvncee cihdfnrqht
       61 gkqkegtltr akrtspnngq nqisrstnss fskaapkalv vgkeheakss ppftasqkfq
      121 essarglaty kymdlarlgn rilvpkspik sgtvldsfqd espenpdpmk qgpedtaape
      181 aaaekqigdl lspepeplmm gsrpwihpll prasgpvkat matglamkgn gtsdlvdalp
      241 vnctsplqts vmgmkagkkk fmkdrqdqpf nkqlrfsvwq rerayryrdi vvrkqdgfth
      301 illstkssen nslnpevmke lqralsmana ddsnlvllsa vgsvfccgld flyfirrlpd
      361 nrkresarma eairnfvnif iqfkkpivva vngpaiglga silplcdvvw anekawfqtp
      421 yttfgqspdg cstvmfpkim ggasanemlf rgrkltaqea cskglvsqvf wpgtftqevm
      481 vrikelascn rvvleeskal vrcnmrlele ranerecevl kkiwgsaqgi dsmrkylkck
      541 tddf
//
LOCUS       XP_060994240             522 aa            linear   MAM 02-DEC-2023
DEFINITION  chromodomain Y-like protein isoform X2 [Dama dama].
ACCESSION   XP_060994240
VERSION     XP_060994240.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138257.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026871000) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..522
                     /product="chromodomain Y-like protein isoform X2"
                     /calculated_mol_wt=58534
     Region          6..57
                     /region_name="CD_CDY"
                     /note="chromodomain of the Chromodomain Y-like protein
                     family; cd18634"
                     /db_xref="CDD:349284"
     Site            order(7..11,27,29..32,36,38..41,43..44,51,54..55)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:349284"
     Region          268..464
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cd06558"
                     /db_xref="CDD:119339"
     Site            order(288,290,321,325..329,372,374..376,398..399,402)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:119339"
     Site            order(327,376)
                     /site_type="active"
                     /note="oxyanion hole (OAH) forming residues [active]"
                     /db_xref="CDD:119339"
     Site            order(356,364,385..388,400..403,409,411..413,415..416,
                     421..422,424..425,427..428,431,442,445,460,463..464)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:119339"
     CDS             1..522
                     /gene="LOC133053750"
                     /coded_by="XM_061138257.1:1..1569"
                     /db_xref="GeneID:133053750"
ORIGIN      
        1 maseelydve rvidkrqnkk gkteyvvqwk gygredatwe peqhlvncee cihdfnrqht
       61 gkqkegtltr akrtspnngq nqisrstnss fskaapkalv vgkeheakss ppftasqkfq
      121 essarglaty kymdlarlgn rilvpkspik sgtvldsfqd espenpdpmk qgpedtaape
      181 aaaekqigdl lspepeplmm gsrpwihpll prasgpvkat matglamkgk gmkagkkkfm
      241 kdrqdqpfnk qlrfsvwqre rayryrdivv rkqdgfthil lstkssenns lnpevmkelq
      301 ralsmanadd snlvllsavg svfccgldfl yfirrlpdnr kresarmaea irnfvnifiq
      361 fkkpivvavn gpaiglgasi lplcdvvwan ekawfqtpyt tfgqspdgcs tvmfpkimgg
      421 asanemlfrg rkltaqeacs kglvsqvfwp gtftqevmvr ikelascnrv vleeskalvr
      481 cnmrlelera nerecevlkk iwgsaqgids mrkylkcktd df
//
LOCUS       XP_060994241             544 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: chromodomain Y-like protein [Dama dama].
ACCESSION   XP_060994241
VERSION     XP_060994241.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138258.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026871000) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..544
                     /product="LOW QUALITY PROTEIN: chromodomain Y-like
                     protein"
                     /calculated_mol_wt=60570
     Region          6..57
                     /region_name="CD_CDY"
                     /note="chromodomain of the Chromodomain Y-like protein
                     family; cd18634"
                     /db_xref="CDD:349284"
     Site            order(7..11,27,29..32,36,38..41,43..44,51,54..55)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:349284"
     Region          290..486
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cd06558"
                     /db_xref="CDD:119339"
     Site            order(310,312,343,347..351,394,396..398,420..421,424)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:119339"
     Site            order(349,398)
                     /site_type="active"
                     /note="oxyanion hole (OAH) forming residues [active]"
                     /db_xref="CDD:119339"
     Site            order(378,386,407..410,422..425,431,433..435,437..438,
                     443..444,446..447,449..450,453,464,467,482,485..486)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:119339"
     CDS             1..544
                     /gene="LOC133053751"
                     /coded_by="XM_061138258.1:1..1635"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /db_xref="GeneID:133053751"
ORIGIN      
        1 maseelydve rvidkrqnkk gkteyvvqwk gygredatwe peqhlvncee cihdfnrqht
       61 gkqkegtltr akrtspnngq nqisrstnss fskaapkalv vgkeheakss ppftasqkfq
      121 essarglaty kymdlarlgn rilvpkspik sgtvldsfqd espenpdpmk qgpedtaape
      181 aaaekqigdl lspepeplmm gsrpwihpll prasgpvkat matglamkgn gtsdlvdalp
      241 vnctsplqts vmgmkagkkk fmkdrqdqpf nkqlrfsvwq resayryrdi vvrkqdgfth
      301 illstkssen nslnpevmke lqralsmana ddsnlvllsa vgsvfccgld flyfirrlpd
      361 nrkressrma eairnfvnif iqfkkpivva vngpaiglga silplcdvvw anekawfqtp
      421 yttfgxspdg cstvmfpkim ggasanemlf rgrkltaqea cskglvsqvf wpgtftqevm
      481 vrikelascn rvvleeskal vrcnmrlele ranerecevl kkiwgsaqgi dsmrkylkck
      541 tddf
//
LOCUS       XP_060994242             261 aa            linear   MAM 02-DEC-2023
DEFINITION  testis-specific Y-encoded protein 3-like [Dama dama].
ACCESSION   XP_060994242
VERSION     XP_060994242.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138259.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026871000) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..261
                     /product="testis-specific Y-encoded protein 3-like"
                     /calculated_mol_wt=30011
     Region          117..261
                     /region_name="PTZ00007"
                     /note="(NAP-L) nucleosome assembly protein -L;
                     Provisional; cl08298"
                     /db_xref="CDD:471807"
     CDS             1..261
                     /gene="LOC133053755"
                     /coded_by="XM_061138259.1:1..786"
                     /db_xref="GeneID:133053755"
ORIGIN      
        1 mqapggvpse eatlywveav eegatleege isgigqevql lvldvmeeve lvvyeeqeqv
       61 sseeqcqehp rpgapsdqpa lealatlqle lepvnkkaqr vharlkhknc qrrmlnlehr
      121 saitqgirgf wikvftnhpq msclmtkqdq dmlhfmtnlk veelqhpthh cmitlsfqrn
      181 tyfqkgvivk kylinvtgkr yqvscstpiq whqgferkay srrnhkssvn ffnwlsdhsf
      241 tgsdqiaevi ikdlwpnplq y
//
LOCUS       XP_060994244             187 aa            linear   MAM 02-DEC-2023
DEFINITION  cyclin-Y-like protein 1 [Dama dama].
ACCESSION   XP_060994244
VERSION     XP_060994244.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138261.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026871005) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 20% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..187
                     /product="cyclin-Y-like protein 1"
                     /calculated_mol_wt=21101
     Region          <33..108
                     /region_name="CYCLIN_CCNY_like"
                     /note="cyclin box found in cyclin-Y (CCNY) family;
                     cd20540"
                     /db_xref="CDD:410243"
     CDS             1..187
                     /gene="LOC133053757"
                     /coded_by="XM_061138261.1:1..564"
                     /db_xref="GeneID:133053757"
ORIGIN      
        1 mvhvlsaake flrayigtkc lpvsrfsvlg ieessclsev ylerlltyae idvcptnwkr
       61 ivlgaillas kvwddqavwn vdysqilkdm tvedmnemer hflellqfni nvpasvyaky
      121 yfdlcsladd nnlsfltapl skeraqslea isrlcedkyk dlgrvavrrs fsadnsigiq
      181 rsnatls
//
LOCUS       XP_060994245             423 aa            linear   MAM 02-DEC-2023
DEFINITION  S100P-binding protein-like [Dama dama].
ACCESSION   XP_060994245
VERSION     XP_060994245.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138262.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026871011) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..423
                     /product="S100P-binding protein-like"
                     /calculated_mol_wt=47420
     Region          21..409
                     /region_name="S100PBPR"
                     /note="S100P-binding protein; pfam15427"
                     /db_xref="CDD:464711"
     CDS             1..423
                     /gene="LOC133053758"
                     /coded_by="XM_061138262.1:179..1450"
                     /db_xref="GeneID:133053758"
ORIGIN      
        1 mmcslvpseq ssgtsllpkd napfswssld edelddslle lsdgeddghf sfteeqiqel
       61 lkdddlsneh fpwggglpnd dsrnvekgek gsqipldtpq ekdspynmgp eaetpdtfkl
      121 pqlttsvghg ptptkplnrr faleknlikv tvapfdptvc dvvldkdkty vskvtsrvte
      181 kpsslgeemr eddlspnest lctesegisp nnsaydgppl pssnnnfqht vsdknisnsk
      241 kptpvfsqil dhsetsntgs swrngsykss femklpvsss sskqdvldkd sgklkvhekr
      301 lgkvipvlqt ktrtnvptfs psdlekqkqs ylrnviahie dpvdsnqgtl gelcalmdqv
      361 hhmhnqkwqh psdltrrnya rfrqrnlqry sltqwvdqnk rshhrfqrlp dfpygplvss
      421 hqq
//
LOCUS       XP_060994246            1128 aa            linear   MAM 02-DEC-2023
DEFINITION  collagen alpha-1(I) chain-like [Dama dama].
ACCESSION   XP_060994246
VERSION     XP_060994246.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138263.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026871036) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1128
                     /product="collagen alpha-1(I) chain-like"
                     /calculated_mol_wt=117118
     Region          <295..625
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <517..960
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1128
                     /gene="LOC133053760"
                     /coded_by="XM_061138263.1:1..3387"
                     /db_xref="GeneID:133053760"
ORIGIN      
        1 mhglifetsi cywqdqpgrg astrsrvcre qgggggpgrg ravaageprr parrgsgekg
       61 vwsgrrppdp paptpaartp drahnprstr dtarragrhr veergegrgg ppsssaphpl
      121 pvagppapaa pgagpgtpgr atprtadaps sarpsrppqr gggrraartr rpargrqtgd
      181 ptraresase qgarrgggww egrgggrgrs pspsprrrrr tggggkagng sgprqargse
      241 trqgaapgss rwgadrggrt ekgtdgvrpr dtnatepave avvaarhreg dgskrpggse
      301 saarahrgis ppeasqhrgg pegahpsrgl tptanpthpe pqpaqenalp prtggphsph
      361 trnpavraka ppapppsqgs egpappgdat grrrpgddth vrrgqlgprp rgtgvegdtg
      421 grtrgtrrka gsggegpast rkqgsrdgge gaarrpentr tqpghqgnqr gipppptheg
      481 gpttpgtpaa pghpwsgpht papppgpacr pptflhpsih pqqirlpsks dpeaqhpgdt
      541 lsseggpdrg pttpppaaaq gqgrarqapp hhgcgaggag adqavapqpp rlppgltprg
      601 rlrahstrta phppntrrgp agpspnsegg gagriatvat ahsggaaagg sgtprlplgs
      661 lekafsprvh rpspnrlsfg pteahqeppl nwaggvcgig krattqervr ghlrddlehs
      721 rgttegptrh ahtpmrgarg maaaqpsppq ggplagstpg rrskriccvq sptaptrhpk
      781 agdgrpkvra gghtptpafl tlpdgqggkt gegprgqtek sghvhwerps lvrhglgpar
      841 estttphqsv esrwrvgggg ekagrrhrrg qspegpalnl tgnlppvpah nltpqaraan
      901 dprrrtpdtw hgayragvvp attgcpqrga qgqrptppcp talgsprggt tswvgqttph
      961 rragaqaqag gssskgrtrr qlaahrprap rasrdpkssv adtkgdrvst ylvakntyfg
     1021 rqndsrrqrg psttrkegpr nldpatcpqh ypmntrpgal gghlayrsvr vsergfdfdv
     1081 hkekrrknrq rgasnktsgp rpgptpgaqt vlhraprtar agphpppd
//
LOCUS       XP_060994247            1128 aa            linear   MAM 02-DEC-2023
DEFINITION  collagen alpha-1(I) chain-like [Dama dama].
ACCESSION   XP_060994247
VERSION     XP_060994247.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138264.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026871036) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1128
                     /product="collagen alpha-1(I) chain-like"
                     /calculated_mol_wt=117118
     Region          <295..625
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <517..960
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1128
                     /gene="LOC133053761"
                     /coded_by="XM_061138264.1:1..3387"
                     /db_xref="GeneID:133053761"
ORIGIN      
        1 mhglifetsi cywqdqpgrg astrsrvcre qgggggpgrg ravaageprr parrgsgekg
       61 vwsgrrppdp paptpaartp drahnprstr dtarragrhr veergegrgg ppsssaphpl
      121 pvagppapaa pgagpgtpgr atprtadaps sarpsrppqr gggrraartr rpargrqtgd
      181 ptraresase qgarrgggww egrgggrgrs pspsprrrrr tggggkagng sgprqargse
      241 trqgaapgss rwgadrggrt ekgtdgvrpr dtnatepave avvaarhreg dgskrpggse
      301 saarahrgis ppeasqhrgg pegahpsrgl tptanpthpe pqpaqenalp prtggphsph
      361 trnpavraka ppapppsqgs egpappgdat grrrpgddth vrrgqlgprp rgtgvegdtg
      421 grtrgtrrka gsggegpast rkqgsrdgge gaarrpentr tqpghqgnqr gipppptheg
      481 gpttpgtpaa pghpwsgpht papppgpacr pptflhpsih pqqirlpsks dpeaqhpgdt
      541 lsseggpdrg pttpppaaaq gqgrarqapp hhgcgaggag adqavapqpp rlppgltprg
      601 rlrahstrta phppntrrgp agpspnsegg gagriatvat ahsggaaagg sgtprlplgs
      661 lekafsprvh rpspnrlsfg pteahqeppl nwaggvcgig krattqervr ghlrddlehs
      721 rgttegptrh ahtpmrgarg maaaqpsppq ggplagstpg rrskriccvq sptaptrhpk
      781 agdgrpkvra gghtptpafl tlpdgqggkt gegprgqtek sghvhwerps lvrhglgpar
      841 estttphqsv esrwrvgggg ekagrrhrrg qspegpalnl tgnlppvpah nltpqaraan
      901 dprrrtpdtw hgayragvvp attgcpqrga qgqrptppcp talgsprggt tswvgqttph
      961 rragaqaqag gssskgrtrr qlaahrprap rasrdpkssv adtkgdrvst ylvakntyfg
     1021 rqndsrrqrg psttrkegpr nldpatcpqh ypmntrpgal gghlayrsvr vsergfdfdv
     1081 hkekrrknrq rgasnktsgp rpgptpgaqt vlhraprtar agphpppd
//
LOCUS       XP_060994249             209 aa            linear   MAM 02-DEC-2023
DEFINITION  protein Shroom2-like [Dama dama].
ACCESSION   XP_060994249
VERSION     XP_060994249.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138266.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026871048) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 13% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..209
                     /product="protein Shroom2-like"
                     /calculated_mol_wt=23376
     Region          <31..203
                     /region_name="ASD2"
                     /note="Apx/Shroom domain ASD2; pfam08687"
                     /db_xref="CDD:462561"
     CDS             1..209
                     /gene="LOC133053780"
                     /coded_by="XM_061138266.1:1..630"
                     /db_xref="GeneID:133053780"
ORIGIN      
        1 mgpqagrcgw vqggarvsga vtesrtlypq qelieslgrk lqvlreares lledvqansa
       61 lgdevealvk avckpnefdk frmfigdldk vvnlllslsg rlarvenaln nlddstppgd
      121 rqsllekqrv liqqhedare lkenldrreg ivfdilasyl gpesladyeh fvkmksalii
      181 eqreledkih lgeeqlkcll dslqpergk
//
LOCUS       XP_060994250            1128 aa            linear   MAM 02-DEC-2023
DEFINITION  collagen alpha-1(I) chain-like [Dama dama].
ACCESSION   XP_060994250
VERSION     XP_060994250.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138267.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026871050) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1128
                     /product="collagen alpha-1(I) chain-like"
                     /calculated_mol_wt=117118
     Region          <295..625
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <517..960
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1128
                     /gene="LOC133053782"
                     /coded_by="XM_061138267.1:1..3387"
                     /db_xref="GeneID:133053782"
ORIGIN      
        1 mhglifetsi cywqdqpgrg astrsrvcre qgggggpgrg ravaageprr parrgsgekg
       61 vwsgrrppdp paptpaartp drahnprstr dtarragrhr veergegrgg ppsssaphpl
      121 pvagppapaa pgagpgtpgr atprtadaps sarpsrppqr gggrraartr rpargrqtgd
      181 ptraresase qgarrgggww egrgggrgrs pspsprrrrr tggggkagng sgprqargse
      241 trqgaapgss rwgadrggrt ekgtdgvrpr dtnatepave avvaarhreg dgskrpggse
      301 saarahrgis ppeasqhrgg pegahpsrgl tptanpthpe pqpaqenalp prtggphsph
      361 trnpavraka ppapppsqgs egpappgdat grrrpgddth vrrgqlgprp rgtgvegdtg
      421 grtrgtrrka gsggegpast rkqgsrdgge gaarrpentr tqpghqgnqr gipppptheg
      481 gpttpgtpaa pghpwsgpht papppgpacr pptflhpsih pqqirlpsks dpeaqhpgdt
      541 lsseggpdrg pttpppaaaq gqgrarqapp hhgcgaggag adqavapqpp rlppgltprg
      601 rlrahstrta phppntrrgp agpspnsegg gagriatvat ahsggaaagg sgtprlplgs
      661 lekafsprvh rpspnrlsfg pteahqeppl nwaggvcgig krattqervr ghlrddlehs
      721 rgttegptrh ahtpmrgarg maaaqpsppq ggplagstpg rrskriccvq sptaptrhpk
      781 agdgrpkvra gghtptpafl tlpdgqggkt gegprgqtek sghvhwerps lvrhglgpar
      841 estttphqsv esrwrvgggg ekagrrhrrg qspegpalnl tgnlppvpah nltpqaraan
      901 dprrrtpdtw hgayragvvp attgcpqrga qgqrptppcp talgsprggt tswvgqttph
      961 rragaqaqag gssskgrtrr qlaahrprap rasrdpkssv adtkgdrvst ylvakntyfg
     1021 rqndsrrqrg psttrkegpr nldpatcpqh ypmntrpgal gghlayrsvr vsergfdfdv
     1081 hkekrrknrq rgasnktsgp rpgptpgaqt vlhraprtar agphpppd
//
LOCUS       XP_060994251            1128 aa            linear   MAM 02-DEC-2023
DEFINITION  collagen alpha-1(I) chain-like [Dama dama].
ACCESSION   XP_060994251
VERSION     XP_060994251.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138268.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026871050) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1128
                     /product="collagen alpha-1(I) chain-like"
                     /calculated_mol_wt=117118
     Region          <295..625
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <517..960
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1128
                     /gene="LOC133053783"
                     /coded_by="XM_061138268.1:1..3387"
                     /db_xref="GeneID:133053783"
ORIGIN      
        1 mhglifetsi cywqdqpgrg astrsrvcre qgggggpgrg ravaageprr parrgsgekg
       61 vwsgrrppdp paptpaartp drahnprstr dtarragrhr veergegrgg ppsssaphpl
      121 pvagppapaa pgagpgtpgr atprtadaps sarpsrppqr gggrraartr rpargrqtgd
      181 ptraresase qgarrgggww egrgggrgrs pspsprrrrr tggggkagng sgprqargse
      241 trqgaapgss rwgadrggrt ekgtdgvrpr dtnatepave avvaarhreg dgskrpggse
      301 saarahrgis ppeasqhrgg pegahpsrgl tptanpthpe pqpaqenalp prtggphsph
      361 trnpavraka ppapppsqgs egpappgdat grrrpgddth vrrgqlgprp rgtgvegdtg
      421 grtrgtrrka gsggegpast rkqgsrdgge gaarrpentr tqpghqgnqr gipppptheg
      481 gpttpgtpaa pghpwsgpht papppgpacr pptflhpsih pqqirlpsks dpeaqhpgdt
      541 lsseggpdrg pttpppaaaq gqgrarqapp hhgcgaggag adqavapqpp rlppgltprg
      601 rlrahstrta phppntrrgp agpspnsegg gagriatvat ahsggaaagg sgtprlplgs
      661 lekafsprvh rpspnrlsfg pteahqeppl nwaggvcgig krattqervr ghlrddlehs
      721 rgttegptrh ahtpmrgarg maaaqpsppq ggplagstpg rrskriccvq sptaptrhpk
      781 agdgrpkvra gghtptpafl tlpdgqggkt gegprgqtek sghvhwerps lvrhglgpar
      841 estttphqsv esrwrvgggg ekagrrhrrg qspegpalnl tgnlppvpah nltpqaraan
      901 dprrrtpdtw hgayragvvp attgcpqrga qgqrptppcp talgsprggt tswvgqttph
      961 rragaqaqag gssskgrtrr qlaahrprap rasrdpkssv adtkgdrvst ylvakntyfg
     1021 rqndsrrqrg psttrkegpr nldpatcpqh ypmntrpgal gghlayrsvr vsergfdfdv
     1081 hkekrrknrq rgasnktsgp rpgptpgaqt vlhraprtar agphpppd
//
LOCUS       XP_060994253             963 aa            linear   MAM 02-DEC-2023
DEFINITION  spermatogenesis-associated protein 31E1-like [Dama dama].
ACCESSION   XP_060994253
VERSION     XP_060994253.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138270.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026871074) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..963
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..963
                     /product="spermatogenesis-associated protein 31E1-like"
                     /calculated_mol_wt=107444
     Region          <4..282
                     /region_name="FAM75"
                     /note="FAM75 family; pfam14650"
                     /db_xref="CDD:464237"
     CDS             1..963
                     /gene="LOC133053797"
                     /coded_by="XM_061138270.1:144..3035"
                     /db_xref="GeneID:133053797"
ORIGIN      
        1 meiqaqpqfl tptipqyhpq pqaqlettvh lspsplvqss ssqrqigiek sfetscttvp
       61 nkassfssna ienqechfwk kqlesrrtlp slvknsqqvf sqvtlnpsqe trssqahgsv
      121 pilpghlisp evrkklehhi sqrfmqqqsg lpcriqasqk lmqpqdqypr pcqaqdregp
      181 srssagrgkm sqdvqkmrsk cpaqilpgtd lchevgqsve kivkdlymfp anppvkdpra
      241 klaseielsl drkqpevsgv lterkaeqic eseipvnvch lrlvdnlvlg tlgetnapmk
      301 testqssqdg kasmttshes lvlspyteqe leahiirfrv rhrwslffkv lkfifrlklk
      361 kvqvptlkvt cesgyqstal ltkglgkppq phageklkrt eavpplerpl pvpsqvteea
      421 rgalggrtpg dthkppeapl tgqedkpppq aptysfvgrm whsmsvvead kgslepspss
      481 amarneaqke trgqaspasc snvivvdlde cspssraqev vegdsagkgt repsvqvkyl
      541 dinidlgrsr sprssespsl nttsaasnte dllfetqsrk lesqgfadqq apaqgratsv
      601 llqdcetgvl lqdcatdvll kdchsnmfla tnilasqesl ssfqilssgd kcnsqklyda
      661 tssegssqgq qvdmrrqlky kshckesvpk dgrekyirpk lrqikkglae rrvyqaqgms
      721 hpgqkkette slrskfrqlv lkkrqipses fkeriklllq wifpskgrep eeplqkgrpe
      781 iatvqsqesi kskstmdsra veaqtlmtav gqilkermvf hqgphateln wyqaefqgpr
      841 glhychhril syqeerrmrr dtpryhqatp tghsfskkwt sprdsrwafs prepgplpgi
      901 vcqhgsrvtr vtghslhcps hglpqkftss gesehafhsi pgrqtllqek nachadkyif
      961 lqc
//
LOCUS       XP_060994254             710 aa            linear   MAM 02-DEC-2023
DEFINITION  spermatogenesis-associated protein 31E1-like [Dama dama].
ACCESSION   XP_060994254
VERSION     XP_060994254.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138271.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026871074) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..710
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..710
                     /product="spermatogenesis-associated protein 31E1-like"
                     /calculated_mol_wt=78127
     Region          79..158
                     /region_name="DUF4599"
                     /note="Domain of unknown function (DUF4599); pfam15371"
                     /db_xref="CDD:464680"
     Region          390..>510
                     /region_name="FAM75"
                     /note="FAM75 family; pfam14650"
                     /db_xref="CDD:464237"
     Region          466..>704
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     CDS             1..710
                     /gene="LOC133053798"
                     /coded_by="XM_061138271.1:28..2160"
                     /db_xref="GeneID:133053798"
ORIGIN      
        1 mmenllfslk stfdtwlnss spfwvidtil aflcglglfl lilpylennp sfapprkhgn
       61 irkhrkerrg rsrssrrnga lkacrdclee leevwdltsl lqrhlgrfpd kdsfhqiswq
      121 dspgevckav pagahppcre eaaptispap ltkqplpcts aispgsvsty sesylsaspt
      181 pepffpldsl sswplavsps ppspphgrac pplpapcstp tpsgsmlslt qgdsttrtlg
      241 tiphrssphs pwrpaipgiv hssspgsala wwqeaataws fspsthlesq keslplyppe
      301 asfwedprng qgeagglafv npnvqellei litkrvelks weekekdkea gyhlnslgkr
      361 ieslghkqdt lghqdfgnit gkhdqllgpe kpqypdtlgg clqktcsqlf wglpflhses
      421 liaavtvpgs alelcpvlfn erskakplhi pakvtsqlsl akhltqpvaq aqpqsltptm
      481 pqlqpsplgh mktqaqplpl tpimpqcqps sevsletqss sqivastmph slpptrahme
      541 aqarpqllvp tlphfqpppq thmetqarpp pwtpltpqfq psprahmetq vrsqllaqtm
      601 shfqlplrah mktqvpplvq tpsmsqcqsp qpqahmeiqd qslpwtpnmp qfqplvqahv
      661 etqgrslpwt atmpqcppss eismevqdhq qpsaptmpqf qppprayvei
//
LOCUS       XP_060994255             175 aa            linear   MAM 02-DEC-2023
DEFINITION  poly(U)-binding-splicing factor PUF60-like [Dama dama].
ACCESSION   XP_060994255
VERSION     XP_060994255.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138272.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026871077) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 26% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..175
                     /product="poly(U)-binding-splicing factor PUF60-like"
                     /calculated_mol_wt=18774
     Region          49..126
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..175
                     /gene="LOC133053799"
                     /coded_by="XM_061138272.1:1..528"
                     /db_xref="GeneID:133053799"
ORIGIN      
        1 mtravdvvyv hwarlwsgll atnqttvltp dqqlmqqqlm qqqqqvannr vyignvpfgf
       61 ssedlkkifv vfgpimscql lpsqenpqqh rgygfieyat peaaklaiet mngfevagkq
      121 lkvnfatamr nspaaaaasa anvaaaamgl pgaaaaanpa aaeqqqeqqq slvrl
//
LOCUS       XP_060994256             404 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: uncharacterized protein LOC133053806 [Dama
            dama].
ACCESSION   XP_060994256
VERSION     XP_060994256.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138273.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026871097) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 11% of CDS bases
            frameshifts :: corrected 2 indels
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..404
                     /product="LOW QUALITY PROTEIN: uncharacterized protein
                     LOC133053806"
                     /calculated_mol_wt=43159
     Region          <5..226
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          87..>376
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          93..131
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          136..192
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          202..234
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          241..290
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          298..354
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          361..386
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..404
                     /gene="LOC133053806"
                     /coded_by="XM_061138273.1:1..1215"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 3 bases in 2 codons"
                     /db_xref="GeneID:133053806"
ORIGIN      
        1 mpaytdkstg flrghkmpvt cvaapgmgda seqphdkdfs aaaaanafsl drhiytggkd
       61 ccilrwdlqe ekksvfrgrr ndfncgghfr pvlglcvapd esffcsggad qllriwdyrs
      121 sttkcvaalr ghsgaiccvk lnnwpsavag gepgpvctqt qsyssagdve vltcgadksi
      181 klwnltvrac lnsyyghtap infmdvmlpn kpltagddct vrswklvqdt hlvfspqltp
      241 vdaccyltps lfacgtqggv islcsvlqkk piaavqqlpp lskmrgahad ssssrrgita
      301 maalrrsevl fagseggavq awrakrrkkt kerkesggnl aggstaasle lvsevrvagv
      361 vtslcltpse htlaaavake nrlgrwtvdk earngialfg lvrr
//
LOCUS       XP_060994257             320 aa            linear   MAM 02-DEC-2023
DEFINITION  neuroblastoma breakpoint family member 4-like, partial [Dama dama].
ACCESSION   XP_060994257
VERSION     XP_060994257.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138274.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026871098) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 29% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..>320
                     /product="neuroblastoma breakpoint family member 4-like"
     Region          183..243
                     /region_name="Olduvai"
                     /note="Olduvai domain; pfam06758"
                     /db_xref="CDD:429104"
     CDS             1..320
                     /gene="LOC133053807"
                     /coded_by="XM_061138274.1:1..>960"
                     /db_xref="GeneID:133053807"
ORIGIN      
        1 mavclpslsd lraqctlmei nqelqlqlek ykqdfrdlte kflvsqatay slanhlqkyn
       61 ckackdives vlgeklpvev rrpaeklaek ptlderlrts dvlirsqare ltqlrqtlqd
      121 gkddsvllkq hlkdllthsd ldnhqgqgfr eslsegyrla erlacklspe tdededevde
      181 qaqetptprf srqmpqmved gvpqnslddy yltysvlpnl sdsfwpyrst aifspedldv
      241 syardvtsdt wedchqepvs fpgsevptsq aqlqksthvt dclqwqldqh leceldvsir
      301 mknppklege gstastqehp
//
LOCUS       XP_060994258             276 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133053809, partial [Dama dama].
ACCESSION   XP_060994258
VERSION     XP_060994258.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138275.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026871099) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         <1..276
                     /product="uncharacterized protein LOC133053809"
     Region          <7..266
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..276
                     /gene="LOC133053809"
                     /coded_by="XM_061138275.1:<1..831"
                     /db_xref="GeneID:133053809"
ORIGIN      
        1 rvsvgeplgm gtrgfspswl rqtvllrpsr vippplpfrl rytkavfcra sqrpepqpta
       61 epeqpaapra rvartltrqp ahtacsptts ltpqppqghr lpsasparpq arapstrhrp
      121 paapghpsha lpcpgvhqcg passsadppl ppahpdrtpv pashgclarr rhrlhasaea
      181 llewpahlsa rsprvpclpf ppalhadatp khpwaclpep gslppplpam alprslilvg
      241 aptshgprql rpalspthad ahgpgrgvee tscgdg
//
LOCUS       XP_060994261             205 aa            linear   MAM 02-DEC-2023
DEFINITION  phosducin-like protein 2, partial [Dama dama].
ACCESSION   XP_060994261
VERSION     XP_060994261.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138278.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026871104) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..>205
                     /product="phosducin-like protein 2"
     Region          11..205
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
     CDS             1..205
                     /gene="LOC133053851"
                     /coded_by="XM_061138278.1:1..>616"
                     /db_xref="GeneID:133053851"
ORIGIN      
        1 msttnpevre tewdslqrkf gnlpplppre teeqltrrav naaesidtla hkslrelanl
       61 eddvdedile kyrrrriaei rrkkqlerfg evyhvgkddf vsevtqtgsl kgssncggtw
      121 vvvhvyrdsv pasealnnil pevarrhkev kfvkaraedv ipdypdnkip tvllyrggsc
      181 ltqligrqre wgaekatiak fekvl
//
LOCUS       XP_060994263             505 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: LETM1 domain-containing protein LETM2,
            mitochondrial-like, partial [Dama dama].
ACCESSION   XP_060994263
VERSION     XP_060994263.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138280.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026871106) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 38% of CDS bases
            frameshifts :: corrected 3 indels
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         <1..505
                     /product="LOW QUALITY PROTEIN: LETM1 domain-containing
                     protein LETM2, mitochondrial-like"
     Region          145..386
                     /region_name="LETM1_RBD"
                     /note="LETM1-like, RBD; pfam07766"
                     /db_xref="CDD:462258"
     CDS             1..505
                     /gene="LOC133053852"
                     /coded_by="XM_061138280.1:<1..1520"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 3 bases in 3 codons"
                     /codon_start=3
                     /db_xref="GeneID:133053852"
ORIGIN      
        1 gaaastctql clsgvlffml lllllrllrl llrllrlllp altllllrpp lllllgplll
       61 llllhllrll lllqrllqrl lllllsllqp lfllllpmvv kkfwkkgkes aihtwrwtvt
      121 gfslfyanvr vsyqllkkki xghplryneh kllvrttada lklipfslmi viplgelllp
      181 vmlrlfpnml pstffekqvd naylsrklka kqelaaffqe lvrehxkhii ehesndalkd
      241 rakalrefqe xllrkdqkdv npflslkdil sfaklfkqef vlekldlqtl qvmckllgie
      301 pyslqshvil qlryhlnniq redrefmweg vetlshdelv eackdrammf hnipdedmre
      361 qmrqwleiss hkdippllll wcrcitlthr pipppaqqqq qrrqlqeeeq qqlltrlllv
      421 prlplpdscg sssetqqqqe ekeqevdsfl titlllrsqm saeqlpqqqq rkaarqqqqr
      481 frcsnrrkqq qsettrrmlk tkmkk
//
LOCUS       XP_060994264             307 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4C3D-like [Dama dama].
ACCESSION   XP_060994264
VERSION     XP_060994264.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138281.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026871109) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..307
                     /product="olfactory receptor 4C3D-like"
                     /calculated_mol_wt=34377
     Region          25..291
                     /region_name="7tmA_OR4A-like"
                     /note="olfactory receptor 4A and related proteins, member
                     of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15939"
                     /db_xref="CDD:320605"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320605"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320605"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320605"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320605"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320605"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320605"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320605"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320605"
     CDS             1..307
                     /gene="LOC133053853"
                     /coded_by="XM_061138281.1:1..924"
                     /db_xref="GeneID:133053853"
ORIGIN      
        1 mdpmsphnvt kfvllgltqn phlqkilfiv flfillftvl anllivitis lsptlsapmy
       61 fflthlsfld asltsvttpk liidllyqrt tiswgacltq lfmehflags evtilivmay
      121 dryvaickpl hyttimrqgl crllvvvvwt grilhatvqi lftmdlifcg pnvidhfmcd
      181 ffsllelacn styrlgivva antggmclli fsmllvsyav ilsslkshgs egrrkalstc
      241 aahftvvvms fvpciftytr pvavyptdkw vtvffailtp mfnpiiytvr nievktairn
      301 llkrgvi
//
LOCUS       XP_060994265             307 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4C3D-like [Dama dama].
ACCESSION   XP_060994265
VERSION     XP_060994265.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138282.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026871112) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..307
                     /product="olfactory receptor 4C3D-like"
                     /calculated_mol_wt=34377
     Region          25..291
                     /region_name="7tmA_OR4A-like"
                     /note="olfactory receptor 4A and related proteins, member
                     of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15939"
                     /db_xref="CDD:320605"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320605"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320605"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320605"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320605"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320605"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320605"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320605"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320605"
     CDS             1..307
                     /gene="LOC133053857"
                     /coded_by="XM_061138282.1:1..924"
                     /db_xref="GeneID:133053857"
ORIGIN      
        1 mdpmsphnvt kfvllgltqn phlqkilfiv flfillftvl anllivitis lsptlsapmy
       61 fflthlsfld asltsvttpk liidllyqrt tiswgacltq lfmehflags evtilivmay
      121 dryvaickpl hyttimrqgl crllvvvvwt grilhatvqi lftmdlifcg pnvidhfmcd
      181 ffsllelacn styrlgivva antggmclli fsmllvsyav ilsslkshgs egrrkalstc
      241 aahftvvvms fvpciftytr pvavyptdkw vtvffailtp mfnpiiytvr nievktairn
      301 llkrgvi
//
LOCUS       XP_060994266             283 aa            linear   MAM 02-DEC-2023
DEFINITION  metastasis-associated protein MTA3-like isoform X1 [Dama dama].
ACCESSION   XP_060994266
VERSION     XP_060994266.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138283.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026871113) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..283
                     /product="metastasis-associated protein MTA3-like isoform
                     X1"
                     /calculated_mol_wt=31636
     Region          65..114
                     /region_name="ZnF_GATA"
                     /note="zinc finger binding to DNA consensus sequence
                     [AT]GATA[AG]; smart00401"
                     /db_xref="CDD:214648"
     Region          150..226
                     /region_name="MTA_R1"
                     /note="MTA R1 domain; pfam17226"
                     /db_xref="CDD:465388"
     CDS             1..283
                     /gene="LOC133053858"
                     /coded_by="XM_061138283.1:1753..2604"
                     /db_xref="GeneID:133053858"
ORIGIN      
        1 mwkttdryvq qkrlkaaeae sklkqvyipt yskpnpnqis tsngkpgavn gavgttfqpq
       61 npllgraces cyatqshqwy swgppnmqcr lcatcwlywk kygglkmptq seeeklppsp
      121 atedprarsh msrqamqgmp vrnsgspksa vktrqafflh ttyftkfarq vckntlrlrq
      181 aarrpfvpin yaairaeyad rhadlsgspl kskstrkpla ciigyleihp skkpnvirst
      241 pslqtpttkr mlatpnhtsl silgkrnysh hngldggtdk sar
//
LOCUS       XP_060994267             282 aa            linear   MAM 02-DEC-2023
DEFINITION  metastasis-associated protein MTA3-like isoform X2 [Dama dama].
ACCESSION   XP_060994267
VERSION     XP_060994267.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061138284.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026871113) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..282
                     /product="metastasis-associated protein MTA3-like isoform
                     X2"
                     /calculated_mol_wt=31549
     Region          64..113
                     /region_name="ZnF_GATA"
                     /note="zinc finger binding to DNA consensus sequence
                     [AT]GATA[AG]; smart00401"
                     /db_xref="CDD:214648"
     Region          149..225
                     /region_name="MTA_R1"
                     /note="MTA R1 domain; pfam17226"
                     /db_xref="CDD:465388"
     CDS             1..282
                     /gene="LOC133053858"
                     /coded_by="XM_061138284.1:1752..2600"
                     /db_xref="GeneID:133053858"
ORIGIN      
        1 mwkttdryvq qkrlkaaeae sklkqvyipt ykpnpnqist sngkpgavng avgttfqpqn
       61 pllgracesc yatqshqwys wgppnmqcrl catcwlywkk ygglkmptqs eeeklppspa
      121 tedprarshm srqamqgmpv rnsgspksav ktrqafflht tyftkfarqv ckntlrlrqa
      181 arrpfvpiny aairaeyadr hadlsgsplk skstrkplac iigyleihps kkpnvirstp
      241 slqtpttkrm latpnhtsls ilgkrnyshh ngldggtdks ar
//
LOCUS       XP_061008263             207 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: fibroblast growth factor 12-like [Dama dama].
ACCESSION   XP_061008263
VERSION     XP_061008263.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152280.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 2 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..207
                     /product="LOW QUALITY PROTEIN: fibroblast growth factor
                     12-like"
                     /calculated_mol_wt=22859
     Region          32..170
                     /region_name="beta-trefoil_FGF"
                     /note="FGF domain, beta-trefoil fold, found in acidic and
                     basic fibroblast growth factor (FGF) superfamily; cl00060"
                     /db_xref="CDD:469595"
     CDS             1..207
                     /gene="LOC133063162"
                     /coded_by="XM_061152280.1:93..716"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 2 bases at 2
                     genomic stop codons"
                     /db_xref="GeneID:133063162"
ORIGIN      
        1 mkilelslkk gvhmlqclcg rslrssssls epqlkgivtr lfsqqgyflq mhpdgtidgt
       61 kdensdytlf nlipvglrav aiqgvkasly vamngedyly ssdvftpeck fkesvfenyy
      121 viyssilyhq qesgxaxflg lnkegqimkg nrakktkpss hfvpklievc myrepslhei
      181 gekqrrsrks sgsptmnggk vvnqdst
//
LOCUS       XP_061008264             262 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 270 [Dama dama].
ACCESSION   XP_061008264
VERSION     XP_061008264.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152281.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..262
                     /product="transmembrane protein 270"
                     /calculated_mol_wt=28473
     Region          1..262
                     /region_name="WBS28"
                     /note="Williams-Beuren syndrome chromosomal region 28
                     protein homolog; pfam15164"
                     /db_xref="CDD:464540"
     CDS             1..262
                     /gene="TMEM270"
                     /coded_by="XM_061152281.1:1..789"
                     /db_xref="GeneID:133063163"
ORIGIN      
        1 meavppvrss lsgtllvvvk lstllvqnra hlynflllki flfnhwlsgl tleaqgshpp
       61 pkitgcpmgr vlragltlle vpvclalrvp rlvwagllgc ahalglapkw lgvweqlgls
      121 aatwtdlfls clhglmlaal lllllvwrly rkaqccslgr lprkallenr vvrrslallk
      181 slyswvestl altswhlayi itwttclash llqaafehta qlaqaqeaep qkalglssep
      241 pppgppapea rpvlpepgtp ge
//
LOCUS       XP_061008265             270 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: methyltransferase-like protein 27 [Dama dama].
ACCESSION   XP_061008265
VERSION     XP_061008265.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152282.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..270
                     /product="LOW QUALITY PROTEIN: methyltransferase-like
                     protein 27"
                     /calculated_mol_wt=28384
     Region          30..198
                     /region_name="COG4976"
                     /note="Predicted methyltransferase, contains TPR repeat
                     [General function prediction only]"
                     /db_xref="CDD:444001"
     CDS             1..270
                     /gene="METTL27"
                     /coded_by="XM_061152282.1:696..1508"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon"
                     /db_xref="GeneID:133063164"
ORIGIN      
        1 maegrslsev ralvgashgi tdlarklhfy dqwapnydqd vaalqycapr lavdcltqal
       61 pgpphaalil dvacgtglva aelqargfrq lhgvdgspgm ldqarargly qclslctlgr
      121 eplpsaegtf davlmvgals dgqvpcsaip ellrvtksgg lvclttrtnp snlrykeale
      181 atldrleqag awerlvarpv drxgnwppps srwglappta tasslasstc tgsrrqprlr
      241 egglvprpql asdppvasar pnlgppllcl
//
LOCUS       XP_061008266             251 aa            linear   MAM 02-DEC-2023
DEFINITION  vacuolar protein sorting-associated protein 37D [Dama dama].
ACCESSION   XP_061008266
VERSION     XP_061008266.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152283.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..251
                     /product="vacuolar protein sorting-associated protein 37D"
                     /calculated_mol_wt=27586
     Region          22..165
                     /region_name="Mod_r"
                     /note="Modifier of rudimentary (Mod(r)) protein;
                     pfam07200"
                     /db_xref="CDD:462117"
     CDS             1..251
                     /gene="VPS37D"
                     /coded_by="XM_061152283.1:9..764"
                     /db_xref="GeneID:133063165"
ORIGIN      
        1 myraraarag pepgspgrfg ilstgqlrdl lqdepkldri vrlsrkfqgl qlereaclas
       61 nyalakenla lrprlemgrt alaikyqelr evaescadkl qrleesmhrw sphcalgwlq
      121 aeleeaeqea eeqmeqlllg eqsleaflpa fqrgralahl rrtqaeklqe llrrrersgq
      181 paptaaaepp ksfpaaavlp tgaargppav prslppldsr pvpplkgspg cplgpaplls
      241 prpsqpepph r
//
LOCUS       XP_061008268             589 aa            linear   MAM 02-DEC-2023
DEFINITION  frizzled-9 [Dama dama].
ACCESSION   XP_061008268
VERSION     XP_061008268.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152285.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..589
                     /product="frizzled-9"
                     /calculated_mol_wt=64524
     Region          35..161
                     /region_name="CRD_FZ"
                     /note="CRD_domain cysteine-rich domain, also known as Fz
                     (frizzled) domain; cl02447"
                     /db_xref="CDD:470581"
     Site            order(46,48..49,52..54)
                     /site_type="other"
                     /note="putative Wnt binding site [polypeptide binding]"
                     /db_xref="CDD:143572"
     Region          219..539
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          229..253
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320164"
     Region          262..283
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320164"
     Region          312..334
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320164"
     Region          355..371
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320164"
     Region          393..416
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320164"
     Region          447..469
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320164"
     Region          501..526
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320164"
     CDS             1..589
                     /gene="FZD9"
                     /coded_by="XM_061152285.1:1..1770"
                     /db_xref="GeneID:133063167"
ORIGIN      
        1 mavpplrral llwqllaagg aaleigrfdp ergrgpapcq vveipmcrgi gynltrmpnl
       61 lghtsqgeaa aelaefaplv qygchshlrf flcslyapmc tdqvstpipa crpmceqarl
      121 rcapimeqfn fgwpdsldca rlptrndpha lcmeapenat agptephkgl gmlpvaprpa
      181 rppgdalpga ggtcenpekf qyveksrsca prcgpgvevf wsrrdkdfal vwmavwsalc
      241 ffstaftvlt fllephrfqy perpiiflsm cynvyslafl iravagaqsv acdqeagaly
      301 viqeglentg ctlvflllyy fgmasslwwv vltltwflaa gkkwgheaie ahgsyfhmaa
      361 wglpalktiv iltlrkvagd eltglcyvas mdaaaltgfv lvplscylvl gtsflltgfv
      421 alfhirkimk tggtntekle klmvkigvfs ilytvpatcv ivcyvyerln mdfwrlrate
      481 qaclaaptpg grrdcslqgg svptvavfml kifmslvvgi tsgvwvwssk tfqtwqslch
      541 rkmaagrara kacrapggyg rgshghykap tvvlhmtktd pslenpthl
//
LOCUS       XP_061008269             327 aa            linear   MAM 02-DEC-2023
DEFINITION  inactive peptidyl-prolyl cis-trans isomerase FKBP6 [Dama dama].
ACCESSION   XP_061008269
VERSION     XP_061008269.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152286.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..327
                     /product="inactive peptidyl-prolyl cis-trans isomerase
                     FKBP6"
                     /calculated_mol_wt=37406
     Region          49..140
                     /region_name="FKBP_C"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
                     pfam00254"
                     /db_xref="CDD:459735"
     Region          178..>293
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Site            order(179..180,182,220,223..224,227..228,230..231,254,
                     257..258,261..262,265)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          204..248
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          253..279
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..327
                     /gene="FKBP6"
                     /coded_by="XM_061152286.1:1..984"
                     /db_xref="GeneID:133063168"
ORIGIN      
        1 mggsarnpgv lqrddspsqs pyqrlsqrml disgdrgvlk dviregagel vtpdasvlvk
       61 ysgylehmdk pfdsncfrkt prlmklgedi tlwgmelgll smrrgelarf lfkptyaygt
      121 lgcpplippn ttvlfeiell dfldsaesdk fcalsaeqqg qfplqkvlkv aaterefgny
      181 lfrqnrfyda ktrykralml lhrraapaee rhlvetakll vflnlsftyl klerptmalr
      241 ygeqaliidq knakalfrcg qacllmteyq kardflvraq reqpfnhdin nelkklasyy
      301 rdymdkerem chrmfapgdn gstigen
//
LOCUS       XP_061008270             487 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase TRIM50 [Dama dama].
ACCESSION   XP_061008270
VERSION     XP_061008270.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152287.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..487
                     /product="E3 ubiquitin-protein ligase TRIM50"
                     /calculated_mol_wt=54601
     Region          14..58
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(16,19,31,33,36,39,53,56)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     Region          87..125
                     /region_name="Bbox2_TRIM50-like"
                     /note="B-box-type 2 zinc finger found in tripartite
                     motif-containing protein TRIM50, TRIM73, TRIM74 and
                     similar proteins; cd19787"
                     /db_xref="CDD:380845"
     Region          283..471
                     /region_name="SPRY_PRY_TRIM50"
                     /note="PRY/SPRY domain in tripartite motif-binding protein
                     50 (TRIM50); cd13743"
                     /db_xref="CDD:293977"
     CDS             1..487
                     /gene="LOC133063169"
                     /coded_by="XM_061152287.1:1..1464"
                     /db_xref="GeneID:133063169"
ORIGIN      
        1 mawqvsvpel edrlqcpmcl evfkeplmlq cghsyckgcl aalsrhlasa lrcpvcrrev
       61 dysssppnvs lakviealql pgdpepqvcv hhrnplslfc ekdqelicgl cgllgahqhh
      121 rvtpvstvys rmkeelaali sdlkqeqkkv deqmaklvnn rtrivnesdv fswvirrefq
      181 elhhlvdeek arclegvegh trglvasldm qleqargare rliqaagvle qfgneshhef
      241 irkyhamass pelqqarlse gafspisfkp glhqadiklt vwkrlfrkvl papeslkldp
      301 atahpllels kgntvvqcgl larrrasqpe rfdystcvla srgfscgrhy wevavgsksd
      361 wrlgvikgta srkgklsksp ehgvwliglk egrvyeafsc prvplpvagh phrigvylhy
      421 eqgeltffda drpddlrply sfqadfqgkl ypildtcwhe rgsnslpmvl pppsgpsqls
      481 plqptkl
//
LOCUS       XP_061008271             647 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/arginine repetitive matrix protein 3 [Dama dama].
ACCESSION   XP_061008271
VERSION     XP_061008271.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152288.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..647
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..647
                     /product="serine/arginine repetitive matrix protein 3"
                     /calculated_mol_wt=70829
     Region          34..100
                     /region_name="cwf21_SRRM3"
                     /note="cwf21 domain found in serine/arginine repetitive
                     matrix protein 3 and similar proteins; cd21376"
                     /db_xref="CDD:410602"
     Region          527..579
                     /region_name="SRRM_C"
                     /note="Serine/arginine repetitive matrix protein
                     C-terminus; pfam15230"
                     /db_xref="CDD:464573"
     CDS             1..647
                     /gene="SRRM3"
                     /coded_by="XM_061152288.1:1..1944"
                     /db_xref="GeneID:133063171"
ORIGIN      
        1 msstvnngaa svpsppdaan gfpqpgassg awpraeeelr aaepglvkra hreildherk
       61 rrvelkcmel qemmeeqgys eeetrqkvrt frqmlmekeg mltredrpgg hivaetprli
      121 egaelgleya pfdeddgpvd cdcpascyrg hrgdrtkhws sssaspppkk kkkkkgghrr
      181 srkkrrldse cscgsssplr kkkksvkkhr rdrsesgsrr krrhrsrspk skrkeknker
      241 krphaespgr rshrhssgss hspslsshys nsrspsrlsp khrddgrktg sqrssgsrsp
      301 spsggsgwgs pqqnggsrqr sgahggrpgs aqspldkpss psprardqae agaatpparg
      361 kespsprsap ssrgrggraa ggaarrrrrr rrrrrsrssa saprrrgrrr arpaqlrgss
      421 rslsrarsss dsgggapgpg pepgserghg ghgkrakera prarpastsp spgrhggpeg
      481 rsssrspgph prswsssrsa sksrsrsaek rarspsrsps pkktlgrdkd aesrarhaea
      541 eaararrrsr syspirkrrr dspsfmeprr itsarkrpip yyrpspssss sclssdyssr
      601 spshspspgh shgsyssrsr trsrtrspsq tptpsyhsrs ssesggf
//
LOCUS       XP_061008272             583 aa            linear   MAM 02-DEC-2023
DEFINITION  scavenger receptor cysteine-rich domain-containing group B protein
            [Dama dama].
ACCESSION   XP_061008272
VERSION     XP_061008272.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152289.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..583
                     /product="scavenger receptor cysteine-rich
                     domain-containing group B protein"
                     /calculated_mol_wt=61502
     Region          69..168
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          200..299
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          355..455
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          481..581
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     CDS             1..583
                     /gene="SSC4D"
                     /coded_by="XM_061152289.1:1..1752"
                     /db_xref="GeneID:133063172"
ORIGIN      
        1 mgplerppig wthkeaemht gpqpdersrg wgprdkttap splppalsfl lllplagalq
       61 ptslpfpelr lvggpsrcrg rlevlhggsw gsvcdddwdv vdanvvcrql gcglalpvpr
      121 plafgqgrgp illdnvecrg qeaalsecss rgwgvhncfh yedvavlcde flptqpptrr
      181 vltsrapptt pqngkgegsv rlvggagpcq grveilhggl wgtvcdddwg lpdaavvcrq
      241 lgcgaalaat tnaffgygtg hilldnvhce ggepslavcl slgwgvhncg hhedagalca
      301 vlghptltap pllatradwa whtepeatgv galpsreptr lttaawaark ksgrlrlvgg
      361 pgpcrgrvev lyaggwgtvc dddwdfadar vacreagcgp algatglghf gygrgpvlld
      421 nvgcagtear lsdcfhlgwg qhncghheda galcsgpeel vqqegaettr vptprprdgh
      481 lrlvngahrc egrvelflgq rwgticddaw dlraagvlcr qlgcgqalaa pgeahfgpgr
      541 gpilldnvkc rgdegalllc shirwdahnc dhsedasvlc qpa
//
LOCUS       XP_061008273             421 aa            linear   MAM 02-DEC-2023
DEFINITION  zona pellucida sperm-binding protein 3 [Dama dama].
ACCESSION   XP_061008273
VERSION     XP_061008273.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152290.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..421
                     /product="zona pellucida sperm-binding protein 3"
                     /calculated_mol_wt=46625
     Region          44..302
                     /region_name="ZP"
                     /note="Zona pellucida (ZP) domain; smart00241"
                     /db_xref="CDD:214579"
     CDS             1..421
                     /gene="ZP3"
                     /coded_by="XM_061152290.1:15..1280"
                     /db_xref="GeneID:133063173"
ORIGIN      
        1 mgprsrlflc fllwgstelc spqpfwddet ehfkpskppt vmvecqeaql vvtvekdlfg
       61 tgklirpadl tlgpnncepl asadtdgvvr fevglhecgn ilqvtddalv ystfllhtpr
      121 pagnlsilrt nraevpiecr yprqgnvssw aiqptwvpfr ttvfseeklv fslrlmeenw
      181 stekmmptfq lgdrahlqaq vhtgshvplr lfvdhcvatl tpdwstspyh tivdfhgclv
      241 dgltdassaf kaprprpevl qfivdmfhfa ndsrntiyit chlkvtpvdr vpdqlnkacs
      301 frkssnrwsp vegptdicrc cskgrcgisg rsmrlshreg qpvprsrrhv teeadvtvgp
      361 liflgkmrdr gvegptsspp lvmlglglat vmtltlaaiv lgltgrrraa shpvcpvsas
      421 q
//
LOCUS       XP_061008275             279 aa            linear   MAM 02-DEC-2023
DEFINITION  uroplakin-3b [Dama dama].
ACCESSION   XP_061008275
VERSION     XP_061008275.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152292.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..279
                     /product="uroplakin-3b"
                     /calculated_mol_wt=30494
     Region          28..207
                     /region_name="UP_IIIb"
                     /note="Uroplakin IIIb; cd09969"
                     /db_xref="CDD:197378"
     CDS             1..279
                     /gene="UPK3B"
                     /coded_by="XM_061152292.1:800..1639"
                     /db_xref="GeneID:133063174"
ORIGIN      
        1 mglparqprp wllllvvlgw sqpclsleli pytprittwd legkvtattf sleqprcvld
       61 ghsraadivw lvvafsnasr vfqnpqtlae ipasprlltd ghymtlpltm dqlpcedpag
      121 gsgrapvlrv gndagcladl hqprycnapl pgpgpyrvkf llmnsrgspq aetrwsdpit
      181 lhqgkspgsi dtwprrrsgd mivitsilss lagllllafl aassmrfssl wwpeeapeql
      241 rigsfmgkry mthhippsea atlpvgcepg lerfpslsp
//
LOCUS       XP_061008276             253 aa            linear   MAM 02-DEC-2023
DEFINITION  uroplakin-3b-like protein 1 [Dama dama].
ACCESSION   XP_061008276
VERSION     XP_061008276.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152293.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..253
                     /product="uroplakin-3b-like protein 1"
                     /calculated_mol_wt=27145
     Region          28..197
                     /region_name="UP_IIIb"
                     /note="Uroplakin IIIb; cd09969"
                     /db_xref="CDD:197378"
     CDS             1..253
                     /gene="LOC133063175"
                     /coded_by="XM_061152293.1:148..909"
                     /db_xref="GeneID:133063175"
ORIGIN      
        1 mglgrgqspl lmallplltc lqtgmsleri gyvpqlssat lggrltqstf tleqprgqfs
       61 hpsisdsdai wlvvahsnat qkftapqkve dtpvpadfpq ggyyltlras ralypggqps
      121 nqlrvlrvgn dtrcsprtrg cnrplpgpgp yrvkflvmsd rgpmaetews sethlqqaev
      181 lqaapgpqta gtvviiails vllaillaal ltlliftwyd tcgstpisgp gelvfmrkyd
      241 thhmsrpsam ggs
//
LOCUS       XP_061008277             148 aa            linear   MAM 02-DEC-2023
DEFINITION  myosin regulatory light chain 10 [Dama dama].
ACCESSION   XP_061008277
VERSION     XP_061008277.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152294.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..148
                     /product="myosin regulatory light chain 10"
                     /calculated_mol_wt=16688
     Region          10..138
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..148
                     /gene="MYL10"
                     /coded_by="XM_061152294.1:76..522"
                     /db_xref="GeneID:133063176"
ORIGIN      
        1 mtrcqtaste vaeaftimdq nrdgfidked lrdtfaalgr invkneelea mvkeapgpin
       61 ftvfltmfge klkgtdpeet ilhafkvfdt egkgfvkadf ikeklmtqad rfseeevkqm
      121 faafppdvcg nldyrnlcyv ithgeekd
//
LOCUS       XP_061008278             243 aa            linear   MAM 02-DEC-2023
DEFINITION  2-acylglycerol O-acyltransferase 3-like [Dama dama].
ACCESSION   XP_061008278
VERSION     XP_061008278.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152295.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..243
                     /product="2-acylglycerol O-acyltransferase 3-like"
                     /calculated_mol_wt=26846
     Region          34..>216
                     /region_name="LPLAT"
                     /note="Lysophospholipid acyltransferases (LPLATs) of
                     glycerophospholipid biosynthesis; cl17185"
                     /db_xref="CDD:473073"
     Site            order(104,107,130..133,181..183)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153249"
     CDS             1..243
                     /gene="LOC133063177"
                     /coded_by="XM_061152295.1:1..732"
                     /db_xref="GeneID:133063177"
ORIGIN      
        1 mktlkkqwle vlsiyqyvlc fvflgpvfsl lgvfllftsl wcfsllylvw lfldwdtpqq
       61 ggrryqwlkn ctvwkhlsdy fpiklvrtve lppdrnyvlg shphgiigig sfcnfategt
      121 gssqqfpglr fslavlncll ylpghreyfl scgvcsvnrq sldfvlsepq lgravvivvg
      181 ganealyavp gehrltlrnr kgfvrlalrh ggpphpgapv paahrgaggp lshavhegsg
      241 atv
//
LOCUS       XP_061008279             262 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133063178 isoform X1 [Dama dama].
ACCESSION   XP_061008279
VERSION     XP_061008279.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152296.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..262
                     /product="uncharacterized protein LOC133063178 isoform X1"
                     /calculated_mol_wt=28231
     Region          <109..207
                     /region_name="LPLAT"
                     /note="Lysophospholipid acyltransferases (LPLATs) of
                     glycerophospholipid biosynthesis; cl17185"
                     /db_xref="CDD:473073"
     CDS             1..262
                     /gene="LOC133063178"
                     /coded_by="XM_061152296.1:48..836"
                     /db_xref="GeneID:133063178"
ORIGIN      
        1 macsaaqsve tmlcpvvrpg lsdgrqphln pervvpahhp pqalglnidq ahrggqevil
       61 kqvscilagr gavrhadwgt garfckppep gfysvaapar pgcshpgwgs pegpayhpre
      121 hyltlrnhqd svllalrhga slvpvypfge ndvfrvkaya pdswqclfqv tfkkflgisp
      181 ctfwgrgglf sakswglvpl arpitivgec lspgkkgahq lgrqprpsqh lcprslqwaa
      241 psrcpsagsp prsrwttitg st
//
LOCUS       XP_061008280             253 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133063178 isoform X2 [Dama dama].
ACCESSION   XP_061008280
VERSION     XP_061008280.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152297.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..253
                     /product="uncharacterized protein LOC133063178 isoform X2"
                     /calculated_mol_wt=27251
     Region          <100..198
                     /region_name="LPLAT"
                     /note="Lysophospholipid acyltransferases (LPLATs) of
                     glycerophospholipid biosynthesis; cl17185"
                     /db_xref="CDD:473073"
     CDS             1..253
                     /gene="LOC133063178"
                     /coded_by="XM_061152297.1:48..809"
                     /db_xref="GeneID:133063178"
ORIGIN      
        1 macsaaqsve tmlcpvvrpg lsdgrqphln pervvpahhp pqalglnidq ahrggqevil
       61 kqvscilagr gaarfckppe pgfysvaapa rpgcshpgwg spegpayhpr ehyltlrnhq
      121 dsvllalrhg aslvpvypfg endvfrvkay apdswqclfq vtfkkflgis pctfwgrggl
      181 fsakswglvp larpitivge clspgkkgah qlgrqprpsq hlcprslqwa apsrcpsags
      241 pprsrwttit gst
//
LOCUS       XP_061008281             238 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133063178 isoform X3 [Dama dama].
ACCESSION   XP_061008281
VERSION     XP_061008281.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152298.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..238
                     /product="uncharacterized protein LOC133063178 isoform X3"
                     /calculated_mol_wt=25820
     Region          <109..207
                     /region_name="LPLAT"
                     /note="Lysophospholipid acyltransferases (LPLATs) of
                     glycerophospholipid biosynthesis; cl17185"
                     /db_xref="CDD:473073"
     CDS             1..238
                     /gene="LOC133063178"
                     /coded_by="XM_061152298.1:48..764"
                     /db_xref="GeneID:133063178"
ORIGIN      
        1 macsaaqsve tmlcpvvrpg lsdgrqphln pervvpahhp pqalglnidq ahrggqevil
       61 kqvscilagr gavrhadwgt garfckppep gfysvaapar pgcshpgwgs pegpayhpre
      121 hyltlrnhqd svllalrhga slvpvypfge ndvfrvkaya pdswqclfqv tfkkflgisp
      181 ctfwgrgglf sakswglvpl arpitivert cwsvtecnsl ssavlenlfg grifffpg
//
LOCUS       XP_061008283             243 aa            linear   MAM 02-DEC-2023
DEFINITION  2-acylglycerol O-acyltransferase 3-like [Dama dama].
ACCESSION   XP_061008283
VERSION     XP_061008283.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152300.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..243
                     /product="2-acylglycerol O-acyltransferase 3-like"
                     /calculated_mol_wt=27139
     Region          34..>216
                     /region_name="LPLAT"
                     /note="Lysophospholipid acyltransferases (LPLATs) of
                     glycerophospholipid biosynthesis; cl17185"
                     /db_xref="CDD:473073"
     Site            order(104,107,130..133,181..183)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153249"
     CDS             1..243
                     /gene="LOC133063180"
                     /coded_by="XM_061152300.1:1..732"
                     /db_xref="GeneID:133063180"
ORIGIN      
        1 mkilqkqqle vlstykyvsc flfmgpffsl lgvfllftsl wwlsvlytvw lfldwdtpcq
       61 ggrrsqwirn wvlwkhmrdy fpikliktae lpsnrnyvlv thphgilsvg vfcnfctevt
      121 gssqqfpglr fslailnslf ylpvyrdyim sygacsvnrq sldfilsqpq lgqavlilvg
      181 gahealhavp gehcltlrnr kgfvrlalrh ggpphpgapv paahrgaggp lshavhegsg
      241 atv
//
LOCUS       XP_061008284             212 aa            linear   MAM 02-DEC-2023
DEFINITION  probable N-acetyltransferase 16 isoform X1 [Dama dama].
ACCESSION   XP_061008284
VERSION     XP_061008284.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152301.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..212
                     /product="probable N-acetyltransferase 16 isoform X1"
                     /calculated_mol_wt=23252
     CDS             1..212
                     /gene="NAT16"
                     /coded_by="XM_061152301.1:235..873"
                     /db_xref="GeneID:133063181"
ORIGIN      
        1 mmlgascdga tsevskpekd vepdaepltq lalgsgpqss agqvqrtgsr irdpgaeess
       61 lgrsrvwpga pggwrrsaqr vrrgesfepr aplesnphrq qwprlqiare svhgidaget
      121 appergerva rllehfcsql vrdstrgirv arlsrddqlg prklkkfrli tkqnkggrra
      181 rpllkgppgf vpspavshrl sfaarsaqwr rp
//
LOCUS       XP_061008285             212 aa            linear   MAM 02-DEC-2023
DEFINITION  probable N-acetyltransferase 16 isoform X1 [Dama dama].
ACCESSION   XP_061008285
VERSION     XP_061008285.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152302.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..212
                     /product="probable N-acetyltransferase 16 isoform X1"
                     /calculated_mol_wt=23252
     CDS             1..212
                     /gene="NAT16"
                     /coded_by="XM_061152302.1:27..665"
                     /db_xref="GeneID:133063181"
ORIGIN      
        1 mmlgascdga tsevskpekd vepdaepltq lalgsgpqss agqvqrtgsr irdpgaeess
       61 lgrsrvwpga pggwrrsaqr vrrgesfepr aplesnphrq qwprlqiare svhgidaget
      121 appergerva rllehfcsql vrdstrgirv arlsrddqlg prklkkfrli tkqnkggrra
      181 rpllkgppgf vpspavshrl sfaarsaqwr rp
//
LOCUS       XP_061008286             171 aa            linear   MAM 02-DEC-2023
DEFINITION  probable N-acetyltransferase 16 isoform X2 [Dama dama].
ACCESSION   XP_061008286
VERSION     XP_061008286.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152303.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..171
                     /product="probable N-acetyltransferase 16 isoform X2"
                     /calculated_mol_wt=18494
     CDS             1..171
                     /gene="NAT16"
                     /coded_by="XM_061152303.1:235..750"
                     /db_xref="GeneID:133063181"
ORIGIN      
        1 mmlgascdga tsevskpekd vepdaepltq lalgsgpqss agqvqrtgsr irdpgaeess
       61 lgrsrvwpga pggwrrsaqr vrrgesfepr aplesnphrq qwprlqiare svhgidaget
      121 appergerva rllehfcsql gillvqfnss allglrrlle aapegrmggw w
//
LOCUS       XP_061008287             619 aa            linear   MAM 02-DEC-2023
DEFINITION  neurosecretory protein VGF [Dama dama].
ACCESSION   XP_061008287
VERSION     XP_061008287.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152304.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..619
                     /product="neurosecretory protein VGF"
                     /calculated_mol_wt=67577
     CDS             1..619
                     /gene="VGF"
                     /coded_by="XM_061152304.1:676..2535"
                     /db_xref="GeneID:133063182"
ORIGIN      
        1 mkslrlpati lfcllllikg lgaappghpe aqppppsseh kepvagdavl gpkdvsapev
       61 raarnsepqd egelfqgvdp ralaavllqa ldrpasppap ggsqqrpeee taeslltetv
      121 rsqthslpap etqapaappr pqtqengaea vdpseeleal asllqelrdf spssakrqqe
      181 taaaetetrt htltrvnles pgpervwras wgefqarvpe raplpppapp qfqarvpesg
      241 plpdvhqfge ggsspkthlg ealaplskay qglaapfpka rrpetsllgg teagerllqq
      301 glaqveagrr qaeatrqaaa qeerladlas dlllqyllqg garqrglggr glqeeegggq
      361 etarqqeeae qerrggeerv geedeeaaea eaeaeeaera rqnallfaee edgeagaedk
      421 rsqeetpghr rkeaegaeeg gaededddee mdpqtidsli elstklhlpa ddvvsiieev
      481 eekrkrkkna ppepvpppra apaptharsp qppppapapa reelpdwnev lppwdreede
      541 vfspgpyrpf pnyirprtlq ppaasrrrhy hhalppsrhy pdreaqarra qeaaeaeerr
      601 lqeqeeleny iehvllrrp
//
LOCUS       XP_061008288             193 aa            linear   MAM 02-DEC-2023
DEFINITION  erythropoietin [Dama dama].
ACCESSION   XP_061008288
VERSION     XP_061008288.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152305.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..193
                     /product="erythropoietin"
                     /calculated_mol_wt=21186
     Region          30..191
                     /region_name="EPO_TPO"
                     /note="Erythropoietin/thrombopoietin; pfam00758"
                     /db_xref="CDD:459927"
     CDS             1..193
                     /gene="EPO"
                     /coded_by="XM_061152305.1:1..582"
                     /db_xref="GeneID:133063183"
ORIGIN      
        1 mgardctprl lllsfllfpl glpvlgappr licdsrvler yileareaen atmgcvegcs
       61 fnenitvpdt kvnfyawkrm evqqqalevw qglaqlseai lrgqvllana sqpcealrlh
      121 vdkavsglrs ltsllralga qkeaiplpda tpsaaplrtf tvdalsklfr iysnflrgkl
      181 tlytgeacrr gdr
//
LOCUS       XP_061008290             140 aa            linear   MAM 02-DEC-2023
DEFINITION  ribonuclease P protein subunit p20 [Dama dama].
ACCESSION   XP_061008290
VERSION     XP_061008290.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152307.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..140
                     /product="ribonuclease P protein subunit p20"
                     /calculated_mol_wt=15586
     Region          33..133
                     /region_name="Rpp20"
                     /note="Rpp20 subunit of nuclear RNase MRP and P;
                     pfam12328"
                     /db_xref="CDD:372048"
     CDS             1..140
                     /gene="POP7"
                     /coded_by="XM_061152307.1:270..692"
                     /db_xref="GeneID:133063184"
ORIGIN      
        1 maenreprgt veaeldpvey tlrkrlphrl prrpndiyvn mktdfkaqla rcqklldgga
       61 rgqnacseiy ihglglainr ainialqlqa gsfgslqvaa ntstvelvde lepetdsrep
      121 ltrirnnsai hirvfrvtpk
//
LOCUS       XP_061008291             140 aa            linear   MAM 02-DEC-2023
DEFINITION  ribonuclease P protein subunit p20 [Dama dama].
ACCESSION   XP_061008291
VERSION     XP_061008291.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152308.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..140
                     /product="ribonuclease P protein subunit p20"
                     /calculated_mol_wt=15586
     Region          33..133
                     /region_name="Rpp20"
                     /note="Rpp20 subunit of nuclear RNase MRP and P;
                     pfam12328"
                     /db_xref="CDD:372048"
     CDS             1..140
                     /gene="POP7"
                     /coded_by="XM_061152308.1:319..741"
                     /db_xref="GeneID:133063184"
ORIGIN      
        1 maenreprgt veaeldpvey tlrkrlphrl prrpndiyvn mktdfkaqla rcqklldgga
       61 rgqnacseiy ihglglainr ainialqlqa gsfgslqvaa ntstvelvde lepetdsrep
      121 ltrirnnsai hirvfrvtpk
//
LOCUS       XP_061008292             140 aa            linear   MAM 02-DEC-2023
DEFINITION  ribonuclease P protein subunit p20 [Dama dama].
ACCESSION   XP_061008292
VERSION     XP_061008292.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152309.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..140
                     /product="ribonuclease P protein subunit p20"
                     /calculated_mol_wt=15586
     Region          33..133
                     /region_name="Rpp20"
                     /note="Rpp20 subunit of nuclear RNase MRP and P;
                     pfam12328"
                     /db_xref="CDD:372048"
     CDS             1..140
                     /gene="POP7"
                     /coded_by="XM_061152309.1:70..492"
                     /db_xref="GeneID:133063184"
ORIGIN      
        1 maenreprgt veaeldpvey tlrkrlphrl prrpndiyvn mktdfkaqla rcqklldgga
       61 rgqnacseiy ihglglainr ainialqlqa gsfgslqvaa ntstvelvde lepetdsrep
      121 ltrirnnsai hirvfrvtpk
//
LOCUS       XP_061008293             140 aa            linear   MAM 02-DEC-2023
DEFINITION  ribonuclease P protein subunit p20 [Dama dama].
ACCESSION   XP_061008293
VERSION     XP_061008293.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152310.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..140
                     /product="ribonuclease P protein subunit p20"
                     /calculated_mol_wt=15586
     Region          33..133
                     /region_name="Rpp20"
                     /note="Rpp20 subunit of nuclear RNase MRP and P;
                     pfam12328"
                     /db_xref="CDD:372048"
     CDS             1..140
                     /gene="POP7"
                     /coded_by="XM_061152310.1:132..554"
                     /db_xref="GeneID:133063184"
ORIGIN      
        1 maenreprgt veaeldpvey tlrkrlphrl prrpndiyvn mktdfkaqla rcqklldgga
       61 rgqnacseiy ihglglainr ainialqlqa gsfgslqvaa ntstvelvde lepetdsrep
      121 ltrirnnsai hirvfrvtpk
//
LOCUS       XP_061008294             426 aa            linear   MAM 02-DEC-2023
DEFINITION  actin-like protein 6B [Dama dama].
ACCESSION   XP_061008294
VERSION     XP_061008294.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152311.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..426
                     /product="actin-like protein 6B"
                     /calculated_mol_wt=46761
     Region          8..417
                     /region_name="ASKHA_NBD_Arp4_ACTL6-like"
                     /note="nucleotide-binding domain (NBD) of the
                     actin-related protein 4 (Arp4)-like subfamily; cd13395"
                     /db_xref="CDD:466846"
     CDS             1..426
                     /gene="ACTL6B"
                     /coded_by="XM_061152311.1:74..1354"
                     /db_xref="GeneID:133063185"
ORIGIN      
        1 msggvyggde vgalvfdigs fsvragyage dcpkadfptt vgllaaeegg glelegekek
       61 kgkifhidtn alhvprdgae vmsplkngmi edwecfrail dhtyskhvks epnlhpvlms
      121 eapwntrakr ekltelmfeq ynipafflck tavltafang rstglvldsg athttaipvh
      181 dgyvlqqgiv ksplagdfis mqcrelfqem aidiippymi aakepvrega ppnwkkkekl
      241 pqvskswhny mcneviqdfq asvlqvsdsp ydeqvaaqmp tvhyempngy ntdygaerlr
      301 ipeglfdpsn vkglsgntml gvghvvttsi gmcdidirpg lygsvivtgg ntllqgftdr
      361 lnrelsqktp psmrlklias nstmerkfsp wiggsilasl gtfqqmwisk qeyeeggkqc
      421 verkcp
//
LOCUS       XP_061008295             524 aa            linear   MAM 02-DEC-2023
DEFINITION  insulin receptor substrate 1-like isoform X1 [Dama dama].
ACCESSION   XP_061008295
VERSION     XP_061008295.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152312.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..524
                     /product="insulin receptor substrate 1-like isoform X1"
                     /calculated_mol_wt=55390
     Region          29..130
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          146..256
                     /region_name="PTB_IRS"
                     /note="Insulin receptor substrate phosphotyrosine-binding
                     domain (PTBi); cd01204"
                     /db_xref="CDD:269915"
     Site            order(155,157,163)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:269915"
     Site            order(205..215,219,223..224,234,244,247,251,254..255)
                     /site_type="other"
                     /note="phosphopeptide binding site [polypeptide binding]"
                     /db_xref="CDD:269915"
     CDS             1..524
                     /gene="LOC133063187"
                     /coded_by="XM_061152312.1:166..1740"
                     /db_xref="GeneID:133063187"
ORIGIN      
        1 mkpgdptttp eaqsaavalg pprpwvcpad vrlcghlrkq ksqrrrffvl radpprlecy
       61 esekkfragr tppkfsvslg gactiskrmd arqrhlivly trdrslgvaa aseaeqqawy
      121 sallearaaa gpsspedpga wilapfqdvw pvtlrpkglg rarglgsggy clclgsgvls
      181 llrkpggrss gatgaspppa lrlsllsvrr cghadsfffl elgrsaptgp gelwlqapda
      241 vvaqsiheav laamkrtgdt gavgraeplp rkpptgafrp sapqsyetpd saaqtselnr
      301 rdgpsetseq atktlarlee aasnpvrler gggyitmgag sdyepmkggq aggyvvmepp
      361 glpastkaap rqplqdggvt eyvtmsccap rsfsssflpl ssgagepgpg lqgaplsird
      421 gwrragaqpc lqppselage yvcieyaaad yigmgtaipe ppdrglnyvd ldlvpplevr
      481 ghapgarprp hsyarlefqn ladtrsscsi tpdsqvrfgp ppcp
//
LOCUS       XP_061008296             520 aa            linear   MAM 02-DEC-2023
DEFINITION  insulin receptor substrate 1-like isoform X2 [Dama dama].
ACCESSION   XP_061008296
VERSION     XP_061008296.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152313.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..520
                     /product="insulin receptor substrate 1-like isoform X2"
                     /calculated_mol_wt=54921
     Region          29..130
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          146..256
                     /region_name="PTB_IRS"
                     /note="Insulin receptor substrate phosphotyrosine-binding
                     domain (PTBi); cd01204"
                     /db_xref="CDD:269915"
     Site            order(155,157,163)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:269915"
     Site            order(205..215,219,223..224,234,244,247,251,254..255)
                     /site_type="other"
                     /note="phosphopeptide binding site [polypeptide binding]"
                     /db_xref="CDD:269915"
     CDS             1..520
                     /gene="LOC133063187"
                     /coded_by="XM_061152313.1:166..1728"
                     /db_xref="GeneID:133063187"
ORIGIN      
        1 mkpgdptttp eaqsaavalg pprpwvcpad vrlcghlrkq ksqrrrffvl radpprlecy
       61 esekkfragr tppkfsvslg gactiskrmd arqrhlivly trdrslgvaa aseaeqqawy
      121 sallearaaa gpsspedpga wilapfqdvw pvtlrpkglg rarglgsggy clclgsgvls
      181 llrkpggrss gatgaspppa lrlsllsvrr cghadsfffl elgrsaptgp gelwlqapda
      241 vvaqsiheav laamkrtgdt gavgraeplp rkpptgafrp sapqsyetpd saaqtselnr
      301 rdgpsetseq atktlarlee aasnpvrler gggyitmgag sdyepmkggq aggyvvmepp
      361 glpastkaap rqplqdggvt eyvtmsccap rsfsssflpl ssgagepgpg lqgaplsird
      421 gwrragaqpc lqppselage yvcieyaaad yigmgtaipe ppdrglnyvd ldlvpplevr
      481 ghapgarprp hsyarlefqn ladtracrvy aspgtpaqeg
//
LOCUS       XP_061008297             843 aa            linear   MAM 02-DEC-2023
DEFINITION  neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter
            1 [Dama dama].
ACCESSION   XP_061008297
VERSION     XP_061008297.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152314.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..843
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..843
                     /product="neuronal tyrosine-phosphorylated
                     phosphoinositide-3-kinase adapter 1"
                     /calculated_mol_wt=87632
     Region          4..418
                     /region_name="NYAP_N"
                     /note="Neuronal tyrosine-phosphorylated
                     phosphoinositide-3-kinase adapter; pfam15439"
                     /db_xref="CDD:464717"
     Region          580..843
                     /region_name="NYAP_C"
                     /note="Neuronal tyrosine-phosphorylated
                     phosphoinositide-3-kinase adapter; pfam15452"
                     /db_xref="CDD:464724"
     CDS             1..843
                     /gene="NYAP1"
                     /coded_by="XM_061152314.1:155..2686"
                     /db_xref="GeneID:133063188"
ORIGIN      
        1 mnllyrktkl ewrqhkeeea krssskevap agpaagpgag pgpgvrvrdi aslrrslrmg
       61 fmtmpasqeh tphpcrsama prslschsvg smdsvggapg aggggltedg gtrrppakpr
      121 rhpstklsma gsgaetppsk kagsqkpape gresgrkvpp qkprrspntq lsvsfdescp
      181 papsprggnl plqrlsrgsc vagdpeagaq eeepvyiemv gdvfkgggrs gggltgpplg
      241 gggptppaga dsdsdeseai yeemkyplpe eagegranga paltaastph qphalqplth
      301 rrpasalpsr rdgtptkttp ceipppfpnl lqhrppllaf pqaksasrtp gdgvsrlpvl
      361 chskepagst papqvparer etpplppppp aanllllgps grarshstpl ppqgsgqprg
      421 erelpnshsm icpkaagapa appapaallp gapkdkavsy tmvysavkvt thsvlpagpp
      481 lgagepktek eiavlhgmlc tssrppvpgk ssphsgalga aagvlhhrac lasphslpdp
      541 tagpltplwt ypaaaaglkr ppayeslkag gvlnkgcgmg apapmvkiql qeqgtdggaf
      601 asiscahvia sagtpeeeed mgastfgagw alqrkvlygg rkakeldkie dsarawngsa
      661 eglgkvered rgpmasgipv rsqgaeglla rihhggdrgg grtalpipcq tfpachrngd
      721 ftggyrlgrs astsgvrqaa lhsprpcsqp rdalsqtqpa lplplplppp pqparerdgk
      781 llevierkrc vckeikarhr pdrglckqes mpilpswrrg peprksgtpp crrqhtvlwd
      841 tai
//
LOCUS       XP_061008299             576 aa            linear   MAM 02-DEC-2023
DEFINITION  glypican-2 [Dama dama].
ACCESSION   XP_061008299
VERSION     XP_061008299.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152316.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..576
                     /product="glypican-2"
                     /calculated_mol_wt=62710
     Region          29..576
                     /region_name="Glypican"
                     /note="pfam01153"
                     /db_xref="CDD:460084"
     CDS             1..576
                     /gene="GPC2"
                     /coded_by="XM_061152316.1:184..1914"
                     /db_xref="GeneID:133063190"
ORIGIN      
        1 myalrsllll llplcpgpgp gpgieakvtr sctetrqilg argyslsvlp palisgehlr
       61 icpqeytccs seieqrltwe teatfrglve engsflvhtl aarhrkfdev fremlssaeh
      121 slsmlfhrsf grlyaqhtpl fsglfsrlrd yyersgegld dalvdfwaql lekmfpllhp
      181 qyifspdylf cltrlassad dslkpfgdsp rrlrlqitra lvaarafvqg letgrnvvse
      241 tlkmplsegc kravmrltgc plcrgvpslp pcrgfclnva ygcigsqgld pdwgpyldgl
      301 lfladkiqgp fsfelaaqsi gvkiseglmh lqensvgvsa qvfqecgspq parararrap
      361 apredvgrfw saavaeeerp ttaagaslpr lvwelrerlg rvrgiwaglp qtvcgdprva
      421 adlsqeaapc wtgagpgryl spvvgsqagq ldnpeldaea sspdlqtrrr rlqlraattr
      481 mkaaalgrdl eledwedasg sgegqhyadd wmagaaavap paraprpprr egaggkggvi
      541 irhsqdrsrt ggtsvgchtq pllilflsal allgpr
//
LOCUS       XP_061008300             139 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM136A-like [Dama dama].
ACCESSION   XP_061008300
VERSION     XP_061008300.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152317.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..139
                     /product="protein FAM136A-like"
                     /calculated_mol_wt=15717
     Region          6..128
                     /region_name="DUF842"
                     /note="Eukaryotic protein of unknown function (DUF842);
                     pfam05811"
                     /db_xref="CDD:461747"
     CDS             1..139
                     /gene="LOC133063191"
                     /coded_by="XM_061152317.1:1..420"
                     /db_xref="GeneID:133063191"
ORIGIN      
        1 madlqqqlrv qevvdsmvks lerenirkmq glmfrcsaac ceesqasmqq vhqciercha
       61 plaqaqalvt sklekfqdrl awctmycndk akgsidagsk efhvkrqlet cvtkcvddhm
      121 nliptmtrkm keslssmgk
//
LOCUS       XP_061008301             307 aa            linear   MAM 02-DEC-2023
DEFINITION  paired immunoglobulin-like type 2 receptor beta isoform X1 [Dama
            dama].
ACCESSION   XP_061008301
VERSION     XP_061008301.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152318.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..307
                     /product="paired immunoglobulin-like type 2 receptor beta
                     isoform X1"
                     /calculated_mol_wt=33706
     Region          29..146
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          45..49
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          64..72
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          104..108
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          118..123
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..307
                     /gene="LOC133063192"
                     /coded_by="XM_061152318.1:145..1068"
                     /db_xref="GeneID:133063192"
ORIGIN      
        1 mglplllpll llvslqaghw aqrnpeplfe mkqrrhlsap eggfihipfs fsyrgklakd
       61 pnvriswrwk hfhgefiykm tppfihenfk nriflnwkkg qktgslwisd lqredqsvyf
      121 chvaldtlty gkqrwqsieg tnltvtpgrk tttwgpittt ttaglggseg krssklwslt
      181 meatvglala svvllkipiv gltvylwwkr skgaqteart parmtlespm ppslspagph
      241 qlssasppps plgtpgrdpv lclkglssgt ewgppssqlr tgisaphnlp gqtqtaqrpa
      301 gagpprt
//
LOCUS       XP_061008302             277 aa            linear   MAM 02-DEC-2023
DEFINITION  paired immunoglobulin-like type 2 receptor beta isoform X2 [Dama
            dama].
ACCESSION   XP_061008302
VERSION     XP_061008302.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152319.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..277
                     /product="paired immunoglobulin-like type 2 receptor beta
                     isoform X2"
                     /calculated_mol_wt=30357
     Region          5..116
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          15..19
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          34..42
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          74..78
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          88..93
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..277
                     /gene="LOC133063192"
                     /coded_by="XM_061152319.1:133..966"
                     /db_xref="GeneID:133063192"
ORIGIN      
        1 mkqrrhlsap eggfihipfs fsyrgklakd pnvriswrwk hfhgefiykm tppfihenfk
       61 nriflnwkkg qktgslwisd lqredqsvyf chvaldtlty gkqrwqsieg tnltvtpgrk
      121 tttwgpittt ttaglggseg krssklwslt meatvglala svvllkipiv gltvylwwkr
      181 skgaqteart parmtlespm ppslspagph qlssasppps plgtpgrdpv lclkglssgt
      241 ewgppssqlr tgisaphnlp gqtqtaqrpa gagpprt
//
LOCUS       XP_061008303             267 aa            linear   MAM 02-DEC-2023
DEFINITION  paired immunoglobulin-like type 2 receptor beta isoform X3 [Dama
            dama].
ACCESSION   XP_061008303
VERSION     XP_061008303.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152320.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..267
                     /product="paired immunoglobulin-like type 2 receptor beta
                     isoform X3"
                     /calculated_mol_wt=29001
     Region          <20..>79
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          24..32
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          64..68
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..267
                     /gene="LOC133063192"
                     /coded_by="XM_061152320.1:145..948"
                     /db_xref="GeneID:133063192"
ORIGIN      
        1 mglplllpll llvslqaakd pnvriswrwk hfhgefiykm tppfihenfk nriflnwkkg
       61 qktgslwisd lqredqsvyf chvaldtlty gkqrwqsieg tnltvtpgrk tttwgpittt
      121 ttaglggseg krssklwslt meatvglala svvllkipiv gltvylwwkr skgaqteart
      181 parmtlespm ppslspagph qlssasppps plgtpgrdpv lclkglssgt ewgppssqlr
      241 tgisaphnlp gqtqtaqrpa gagpprt
//
LOCUS       XP_061008304             246 aa            linear   MAM 02-DEC-2023
DEFINITION  paired immunoglobulin-like type 2 receptor beta isoform X4 [Dama
            dama].
ACCESSION   XP_061008304
VERSION     XP_061008304.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152321.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..246
                     /product="paired immunoglobulin-like type 2 receptor beta
                     isoform X4"
                     /calculated_mol_wt=27715
     Region          29..146
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          45..49
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          64..72
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          104..108
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          118..123
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..246
                     /gene="LOC133063192"
                     /coded_by="XM_061152321.1:145..885"
                     /db_xref="GeneID:133063192"
ORIGIN      
        1 mglplllpll llvslqaghw aqrnpeplfe mkqrrhlsap eggfihipfs fsyrgklakd
       61 pnvriswrwk hfhgefiykm tppfihenfk nriflnwkkg qktgslwisd lqredqsvyf
      121 chvaldtlty gkqrwqsieg tnltvtpgrk tttwgpittt ttaglggseg krssklwslt
      181 meatvglala svvllkipiv gltvylwwkr skgaqteart pasvlpgplp rwrllgdqgl
      241 staqrt
//
LOCUS       XP_061008306             503 aa            linear   MAM 02-DEC-2023
DEFINITION  cytochrome P450 3A24-like [Dama dama].
ACCESSION   XP_061008306
VERSION     XP_061008306.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152323.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..503
                     /product="cytochrome P450 3A24-like"
                     /calculated_mol_wt=57124
     Region          67..492
                     /region_name="CYP3A"
                     /note="cytochrome P450 family 3, subfamily A; cd20650"
                     /db_xref="CDD:410743"
     Site            order(76,105..108,119..120,210,212..213,215,220,241,301,
                     304..305,309,370..372,374,481..482)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410743"
     Site            order(105,118..119,126,130,137,302,305..306,309,370,373,
                     375,434..437,440..444,448)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410743"
     CDS             1..503
                     /gene="LOC133063194"
                     /coded_by="XM_061152323.1:1..1512"
                     /db_xref="GeneID:133063194"
ORIGIN      
        1 melipsfsme twvllatslv llyvygtysh glfkklgvpg prplplfgni lsyrkgicef
       61 deecfkkygk mwgifegkhp llvitdpdvi ktvlvkecys vftnrrifgp lgimknavsv
      121 aedeqwkrir tllsptftsg klkemfpiir qygdvlvrnl rkeaekgmav dikevfgays
      181 mdvitstsfg vnidslgnpq dpfvdnakkl lrfdildpll fsvalfpfli pifevlnism
      241 fpksavsfft tsvkkikesr lkdiqkprvd flqlminsqn sketdnhkal sdqelvaqsi
      301 ififggyett sstlsfiiye lathpdvqqk lqeeidatfp nkapptydvl aqmeyldmvv
      361 netlrmfpia vridrfckkd veihgvsipk gtavtvpisv lhrdpefwpe peefrperfs
      421 kknkdsinpy vylpfgsgpr ncigmrfaim nmklavvril qnfsfkpcke tqiplkinsq
      481 gllrpekpiv lkvvlrdeti sga
//
LOCUS       XP_061008307             522 aa            linear   MAM 02-DEC-2023
DEFINITION  importin subunit alpha-8 [Dama dama].
ACCESSION   XP_061008307
VERSION     XP_061008307.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152324.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..522
                     /product="importin subunit alpha-8"
                     /calculated_mol_wt=57147
     Region          7..488
                     /region_name="SRP1"
                     /note="Karyopherin (importin) alpha [Intracellular
                     trafficking and secretion]; COG5064"
                     /db_xref="CDD:227396"
     Region          69..95
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          106..138
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(129,133,137,171,175,179,214,218,222)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          146..182
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          188..223
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          240..265
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(256,260,264,298,302,306,340,344,348)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          273..309
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          315..349
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          357..390
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          400..432
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          451..481
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     CDS             1..522
                     /gene="KPNA7"
                     /coded_by="XM_061152324.1:1..1569"
                     /db_xref="GeneID:133063196"
ORIGIN      
        1 mptldapeer lrkfkyrgkd asarrqqria vslelrkakk deqalkrrni tnvspdpadq
       61 qtkgdsltlq eiisgvnasd pelcfqatqa arkmlsrekn pplklvvdag liprlvellk
      121 sslhprlqfe aawaltnias gateltravv dggaiqplve llssphmtvc eqavwalgni
      181 agdgpefrdn vissdaiphl ltlvsssipv pflrniawtl snlcrnknpy psdhavkqml
      241 palfyllghp drevlsdtcw alsyltdgcd arigqvvdag vlprlvelms sselnvltps
      301 lrtvgnivtg tdhqtqlald agilsvlpql lthprssiqk eaawalsnva agprqhiqql
      361 iacgalpplv avlkngefkv qkeavwtvan fttggsvdql iqlvqagvle plinlltipd
      421 nkiviiildv lffilqaaek isqkenmcll ieglggldri ealqlhenrq valtalniie
      481 rhfseeeetv talpardqdh kflkdltnty hccttpkrgp rp
//
LOCUS       XP_061008308             423 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 130 [Dama dama].
ACCESSION   XP_061008308
VERSION     XP_061008308.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152325.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..423
                     /product="transmembrane protein 130"
                     /calculated_mol_wt=46399
     Region          144..>210
                     /region_name="PKD"
                     /note="polycystic kidney disease I (PKD) domain; similar
                     to other cell-surface modules, with an IG-like fold;
                     domain probably functions as a ligand binding site in
                     protein-protein or protein-carbohydrate interactions; a
                     single instance of the repeat is...; cd00146"
                     /db_xref="CDD:238084"
     Region          267..312
                     /region_name="PKAT_KLD"
                     /note="PKAT, KLD domain; pfam20433"
                     /db_xref="CDD:466582"
     CDS             1..423
                     /gene="TMEM130"
                     /coded_by="XM_061152325.1:47..1318"
                     /db_xref="GeneID:133063197"
ORIGIN      
        1 mapalwprlg rilwlacllp laparvaagl yelqlttdgp attgaevtit aslvaddngs
       61 lalpastsly rfhwihtpll ltgkvdeafs stirvvgsvp gdfpvsvwvt aadcgmcqpv
      121 arsllvlpvt eflvgnlvvt qntslpwpss yltktvlkvs fllhdpsnff knasflyswd
      181 fgdgtqmvtr dgtvyynysi igsftvkvkv vagweqvtsd agrgilqktg dfsaslklqe
      241 tlrgiqvlgp tliqtfqkmv vtlnflgspp lnvcwrlkpe clpleegecl pvavdstayn
      301 lthifrdpgd ycfsiqaenv iskthqyhkv qvwpssiqpa vfafpcatli tmmlafimym
      361 tlrnathqkd mvenpepptg vkcccqmccg pflletpsey levvrenhgl lpplyksvkt
      421 ytv
//
LOCUS       XP_061008309             431 aa            linear   MAM 02-DEC-2023
DEFINITION  neuronal pentraxin-2 [Dama dama].
ACCESSION   XP_061008309
VERSION     XP_061008309.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152326.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..431
                     /product="neuronal pentraxin-2"
                     /calculated_mol_wt=47096
     Region          56..>214
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     Region          219..424
                     /region_name="PTX"
                     /note="Pentraxin / C-reactive protein / pentaxin family;
                     smart00159"
                     /db_xref="CDD:128463"
     Site            order(277,355,357,364,367)
                     /site_type="active"
                     /note="calcium mediated ligand binding site [active]"
                     /db_xref="CDD:238086"
     Site            order(317,334,372,419)
                     /site_type="active"
                     /note="intermolecular salt bridges [active]"
                     /db_xref="CDD:238086"
     CDS             1..431
                     /gene="NPTX2"
                     /coded_by="XM_061152326.1:1..1296"
                     /db_xref="GeneID:133063198"
ORIGIN      
        1 mlallaagva lavaagaqdg papgnrfvct alppeaarag cplpampmqg galspeeelr
       61 aavlqlretv vqqketlgsq reaireltak larceglaeg kvpgraasgk dtmgdlprdp
      121 ghvveqlsrs lqtlkdrles lehqlranvs namlpgdfre vlqrrlgele rqllrkvael
      181 edeksllhne tsahrqktes alnallqrvt elergnsafk spdafkvslp lrtnylygki
      241 kktlpelyaf ticlwlrssa spgigtpfsy avpgqaneiv liewgnnpie llindkvaql
      301 plfvsdgkwh hicvtwttrd gmweafqdge klgtgenlap whpikpggvl ilgqeqdtvg
      361 grfdatqafv gelsqfniwd rvlraqeiin iancstnmpg niipwvdnnv dvfggaskwp
      421 vetceerlld l
//
LOCUS       XP_061008311             808 aa            linear   MAM 02-DEC-2023
DEFINITION  protein ELFN1 [Dama dama].
ACCESSION   XP_061008311
VERSION     XP_061008311.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152328.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..808
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..808
                     /product="protein ELFN1"
                     /calculated_mol_wt=87548
     Region          41..>191
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          66..86
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          87..110
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          111..134
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          135..158
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          159..172
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          163..>234
                     /region_name="PCC"
                     /note="polycystin cation channel protein; TIGR00864"
                     /db_xref="CDD:188093"
     CDS             1..808
                     /gene="ELFN1"
                     /coded_by="XM_061152328.1:1..2427"
                     /db_xref="GeneID:133063202"
ORIGIN      
        1 maacgrgapw vwacvaaall qvgglvrgdc wliegdkgfv wlaicsqnqp pyeaipqqin
       61 stivdlrlne nrirsvqyaa lsrfgnltyl nltkneigyi edgafsgqfn lqvlqlgynr
      121 lrnltegvlr glgkleylyl qanlieavap gafwecpniv nvdlsmnriq rlhsatfagl
      181 arlsvcelys npfycscell gflrwlaafa natqahdrvq cespplysgy fllgqgrhgq
      241 rsilgklqsv ctdspyaaet rpvpgrpppg rspppppapp aepseapcad decfsgdgtt
      301 plvalptlgp qaearplikv kqltqnsati tvqlpspftr mytlehfnns ksstvsrltr
      361 aqeeirltnl yaltnytycv vssssglhhn htclticlpq ppsppgpvps pstathyimt
      421 vlgclfgmvl vlgavyyclr rrrrregqqk qaaaaagslk ktiielkygp eleapglapl
      481 sqgpllgpea vtripylpag pgeveqyqla egggtpkgsk ggymevraae qverrdgepg
      541 rpgpdsqssv aeistiakev dkvnqiinnc idalkaests fqgskpgavs taeplaskrg
      601 flaptyqdtc glqrhhslea apgaprasss ssgsarsprp yraeptalhe akyiekgspa
      661 aeailtvtpa aavlraepek grqygehrhs ypgphpaepp appappeslg grkasilepl
      721 trprprdlay aplspqyhhl syasspeyac rasrslwgrf rlsrrrhrda gecvaaghal
      781 rrkvqfakde dlhdildywk gvsaqhks
//
LOCUS       XP_061008312             122 aa            linear   MAM 02-DEC-2023
DEFINITION  proteasome assembly chaperone 3 [Dama dama].
ACCESSION   XP_061008312
VERSION     XP_061008312.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152329.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..122
                     /product="proteasome assembly chaperone 3"
                     /calculated_mol_wt=12937
     Region          34..119
                     /region_name="PAC3"
                     /note="Proteasome assembly chaperone 3; pfam10178"
                     /db_xref="CDD:462980"
     CDS             1..122
                     /gene="PSMG3"
                     /coded_by="XM_061152329.1:66..434"
                     /db_xref="GeneID:133063205"
ORIGIN      
        1 megkplvtsk qktavvcgvp tqvvctafss hilvvvtqlg kmgtlvslep ssvtsdigkp
       61 vlttkvllgk deplvhvfar nlvafvsqea gnravllala vkdrnmevvk alreviqtcq
      121 vw
//
LOCUS       XP_061008313             534 aa            linear   MAM 02-DEC-2023
DEFINITION  homeobox protein unc-4 homolog [Dama dama].
ACCESSION   XP_061008313
VERSION     XP_061008313.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152330.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..534
                     /product="homeobox protein unc-4 homolog"
                     /calculated_mol_wt=53843
     Region          110..166
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..534
                     /gene="UNCX"
                     /coded_by="XM_061152330.1:1..1605"
                     /db_xref="GeneID:133063206"
ORIGIN      
        1 mmdgrllehp haqfggslgg vvgfpyplgh hhvyelaghq lqsaaaaaaa asvpfsidgl
       61 lsgscaaaaa svvnpapllp aacgvggdsq pfklsdsgdp dkespgckrr rtrtnftgwq
      121 leelekafne shypdvfmre alalrldlve srvqvwfqnr rakwrkkent kkgpgrpahn
      181 shpttcsgep mdpeeiarke lekmekkkrk hekkllksqs rhlhspggls lhsapssdsd
      241 sgggglspep pepppsaaaa kgpgahnaga aaaapappge ppapgtcdpa ffpsqrsgag
      301 pqprlgrpvd keaapcapga gaaergaagp pkaspfsves llsdspprrk appanaaaag
      361 ldfapglpca prtligkghf llypitqplg flvpqaalkg gaspepapkd appapsvppa
      421 ppaqasfgaf qgpggapdsa farrspdava spgaptpapf rdaaasaegg ggdcadagta
      481 cpaalppppp plapspgpgl rapspaaepa vggapepgas tgpsardgee vdmd
//
LOCUS       XP_061008314             381 aa            linear   MAM 02-DEC-2023
DEFINITION  cAMP-dependent protein kinase type I-beta regulatory subunit [Dama
            dama].
ACCESSION   XP_061008314
VERSION     XP_061008314.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152331.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..381
                     /product="cAMP-dependent protein kinase type I-beta
                     regulatory subunit"
                     /calculated_mol_wt=42928
     Region          11..64
                     /region_name="DD_RIbeta_PKA"
                     /note="dimerization/docking (D/D) domain of the Type I
                     beta Regulatory subunit of cAMP-dependent protein kinase;
                     cd12102"
                     /db_xref="CDD:438523"
     Site            order(15,18..19,28..29,31..32,35..36)
                     /site_type="other"
                     /note="putative AKAP interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:438523"
     Site            order(17..18,21,25,27,30..31,35,38..39,42..48,50..51,
                     54..55,57..58,61..62)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:438523"
     Region          137..246
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(201..202,211..213)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(233..235,239..241)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          255..370
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(325..326,335..337)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(357..359,363..365)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     CDS             1..381
                     /gene="PRKAR1B"
                     /coded_by="XM_061152331.1:174..1319"
                     /db_xref="GeneID:133063207"
ORIGIN      
        1 maapgaqqld eddglracel yvqrrgiqqv lkdcivqlcl akperpmrfl rehferleke
       61 enrqilaqqk sasqsdlqde dvsplppnpv vkarhrrggv saevyteeda vsyvrkvipk
      121 dyktmtalak aisknvlfsh lddnersdif damfpvthia getviqqgde gdnfyvidqg
      181 evdvyvngew vtsiseggsf gelaliygtp raatvkaktd lklwgidrds yrrilmgstl
      241 rkrrmyeefl skvsilasle kwerltvada lepvqfedge kivvqgepgd dffiitegta
      301 svlqrrspne eyvevgrlgp sdyfgeiall lnrpraatvv argplkcvkl drprfervlg
      361 pcseilkrni qrynsfislt v
//
LOCUS       XP_061008316             381 aa            linear   MAM 02-DEC-2023
DEFINITION  cAMP-dependent protein kinase type I-beta regulatory subunit [Dama
            dama].
ACCESSION   XP_061008316
VERSION     XP_061008316.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152333.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..381
                     /product="cAMP-dependent protein kinase type I-beta
                     regulatory subunit"
                     /calculated_mol_wt=42928
     Region          11..64
                     /region_name="DD_RIbeta_PKA"
                     /note="dimerization/docking (D/D) domain of the Type I
                     beta Regulatory subunit of cAMP-dependent protein kinase;
                     cd12102"
                     /db_xref="CDD:438523"
     Site            order(15,18..19,28..29,31..32,35..36)
                     /site_type="other"
                     /note="putative AKAP interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:438523"
     Site            order(17..18,21,25,27,30..31,35,38..39,42..48,50..51,
                     54..55,57..58,61..62)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:438523"
     Region          137..246
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(201..202,211..213)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(233..235,239..241)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          255..370
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(325..326,335..337)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(357..359,363..365)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     CDS             1..381
                     /gene="PRKAR1B"
                     /coded_by="XM_061152333.1:75..1220"
                     /db_xref="GeneID:133063207"
ORIGIN      
        1 maapgaqqld eddglracel yvqrrgiqqv lkdcivqlcl akperpmrfl rehferleke
       61 enrqilaqqk sasqsdlqde dvsplppnpv vkarhrrggv saevyteeda vsyvrkvipk
      121 dyktmtalak aisknvlfsh lddnersdif damfpvthia getviqqgde gdnfyvidqg
      181 evdvyvngew vtsiseggsf gelaliygtp raatvkaktd lklwgidrds yrrilmgstl
      241 rkrrmyeefl skvsilasle kwerltvada lepvqfedge kivvqgepgd dffiitegta
      301 svlqrrspne eyvevgrlgp sdyfgeiall lnrpraatvv argplkcvkl drprfervlg
      361 pcseilkrni qrynsfislt v
//
LOCUS       XP_061008317             228 aa            linear   MAM 02-DEC-2023
DEFINITION  forkhead box L3 [Dama dama].
ACCESSION   XP_061008317
VERSION     XP_061008317.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152334.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..228
                     /product="forkhead box L3"
                     /calculated_mol_wt=25479
     Region          32..115
                     /region_name="Forkhead"
                     /note="Forkhead domain; pfam00250"
                     /db_xref="CDD:459732"
     CDS             1..228
                     /gene="FOXL3"
                     /coded_by="XM_061152334.1:1..687"
                     /db_xref="GeneID:133063208"
ORIGIN      
        1 mfdssqypyn cfnydaddyp agssdeekrl trpaysyial iamaiqqspt grvtlsgiyd
       61 fimrrfpyyr anqrawqnsi rhnlslnscf vkvprtdghe kgkgnywtfa ggceslldlf
      121 engnfrrrrr rrgpvgaegr gargtdagph pgppdpasap atpipprepp tpaspavlgr
      181 eahrdikfsi dyilstpdpl pgcrsphvqe grhpplevrq vnlhlwtm
//
LOCUS       XP_061008318             159 aa            linear   MAM 02-DEC-2023
DEFINITION  group 10 secretory phospholipase A2-like [Dama dama].
ACCESSION   XP_061008318
VERSION     XP_061008318.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152335.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..159
                     /product="group 10 secretory phospholipase A2-like"
                     /calculated_mol_wt=17496
     Region          37..151
                     /region_name="PLA2c"
                     /note="Phospholipase A2, a family of secretory and
                     cytosolic enzymes; the latter are either Ca dependent or
                     Ca independent. PLA2 cleaves the sn-2 position of the
                     glycerol backbone of phospholipids (PC or
                     phosphatidylethanolamine), usually in a
                     metal-dependent...; cd00125"
                     /db_xref="CDD:153091"
     Site            order(38,41,45,54,65,97)
                     /site_type="active"
                     /note="putative hydrophobic channel [active]"
                     /db_xref="CDD:153091"
     Site            order(62,64,66,83)
                     /site_type="other"
                     /note="primary metal binding site"
                     /db_xref="CDD:153091"
     Site            order(64,82..83,86,101,127)
                     /site_type="active"
                     /note="catalytic network [active]"
                     /db_xref="CDD:153091"
     CDS             1..159
                     /gene="LOC133063210"
                     /coded_by="XM_061152335.1:1..480"
                     /db_xref="GeneID:133063210"
ORIGIN      
        1 maplplcptv glllllllgs gpglraapqr shvhrrgllg lagaidcvgp rpalvylnyg
       61 cfcglgghgq pqdaidwcch ahdccythae nygcnpklqp yswncvnqrv mceptedkcq
      121 elmckcdqef ayclaqakyn ikylfyphfl cknsspkcd
//
LOCUS       XP_061008320            1526 aa            linear   MAM 02-DEC-2023
DEFINITION  phospholipid-transporting ATPase ABCA3-like [Dama dama].
ACCESSION   XP_061008320
VERSION     XP_061008320.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152337.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1526
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1526
                     /product="phospholipid-transporting ATPase ABCA3-like"
                     /calculated_mol_wt=173071
     Region          <32..1518
                     /region_name="rim_protein"
                     /note="retinal-specific rim ABC transporter; TIGR01257"
                     /db_xref="CDD:130324"
     CDS             1..1526
                     /gene="LOC133063214"
                     /coded_by="XM_061152337.1:124..4704"
                     /db_xref="GeneID:133063214"
ORIGIN      
        1 mptlkvkyrl rfrsekntpw ftellfpipp ssgprnpvsp qggnpayykd gfllvqhald
       61 kaiivyhngr aaemlfenvt ifvtrfpypa yykddfflsf islfplevll ifslteftli
      121 rtivmeketr lkeyqfmigl sngmlwasyf vtfllmfsii vcilcvvlca kiapivvlkn
      181 sdpslifvff lcfvtatitf gflisaffnk ttlavsiggf lfyltffpfv ivitmygmls
      241 htgklascli sniavalgit tiskmemked gakwnnflsq vspddeltla qimgmllfda
      301 flyglltwyi davfpgkygv pkpwyffmqk gywlgrptsi rkkedmhvvs tvqnayfeee
      361 pvgltagiri qhlykeftlq nmtvlavqdl slnlyegqit vllghngagk tttlsiltgl
      421 yrptsgkvyi rgydiskdiv qarrnlglcp qedilfrhlt vsehlyfycv ikgvppeirs
      481 keinkmlisf dliekrdals kslsggmkrk lsiiialigg skvvildept sgmdpvsrrf
      541 twdvlqkhke nrtilltthh mdeadilgdr iaimtkgtlq ccgstiflkk vygvgyhlim
      601 vkdrhcdvke iskmikyhvp earlesnvaa elsfilpkey anrfkdllte mtdrqeelgi
      661 asfgisittm eevfikvsql hnptlqalpn edesedtnqn mnvprnferp ysssnlskrs
      721 nitfntgwtl ysqqffamfi kramftwrnw nlillqilaf vgifyflmsd veisisgekl
      781 dremdleqyg qtivpfsvsg nseftmnftk nleillkakk qklhkvngnl maylansqec
      841 iysciiafsi evngsenivn fwfnnqayhs splslavldn iifmslsgpd asititnrpq
      901 ptrssgghen raltglqlal nlyfgvsilv sgfclltvne rvtkakhiqf lsgvyavnfw
      961 lsallwdfli fftscclllv vftfsdlkil vtnyhfldtm liftvfgwsv ipftylisfl
     1021 fsshtsaytk lvifnycagi fgatadlvis aiqgekaask nillkammvl pihnfgmsis
     1081 ryydieytkf acaspekvsp lmncskavte rsiytlehda vgryllamav tgllffllif
     1141 llettlwkvk tfvfryilfg ifkklfkerv skelsgesed edvqnernri lehsqeslna
     1201 tvlikeltkv yfsspivlav rnisvtiqkq ecfgllglng agktttfeil tgeevassgd
     1261 vfverlsitk nilkvrskig ycpqfdalld ymtareimim yarlwgipet kinnyikksm
     1321 qalnlesyad kyiytysggn krrlstaial mgnpsvifld epstgmdpva rrllwnavtq
     1381 tresgkaiii tshsmeecda lctklaimvk gkfmclgspq hlknkfgnvy ilkvkintde
     1441 kenkledfkt fmettfpgse lkdenqgiin yyvpsknnsw gemfgileea keefnledys
     1501 isqitleevf ltfagqqnpe aenkas
//
LOCUS       XP_061008321            1670 aa            linear   MAM 02-DEC-2023
DEFINITION  phospholipid-transporting ATPase ABCA3-like [Dama dama].
ACCESSION   XP_061008321
VERSION     XP_061008321.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152338.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1670
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1670
                     /product="phospholipid-transporting ATPase ABCA3-like"
                     /calculated_mol_wt=190793
     Region          <104..1665
                     /region_name="rim_protein"
                     /note="retinal-specific rim ABC transporter; TIGR01257"
                     /db_xref="CDD:130324"
     CDS             1..1670
                     /gene="LOC133063215"
                     /coded_by="XM_061152338.1:1..5013"
                     /db_xref="GeneID:133063215"
ORIGIN      
        1 mdlltlnqlt vllwknftlk rrqffnlile vlttlvfpvm llllravihi tvagpysfts
       61 qpistlpsfl qndetweliy vpsnidvvke itenvkrnln isikvqgfss eiefekyiky
      121 dyrahkvlaa ivfdcdfknr hdplplqvky rlrfaaiqrt iiwpdeigwk ttllfpnrps
      181 vgprnpdhhd gggpgyireg flaiqhaldk aiivyhessa kqlfdnvsif vqrfpypayp
      241 ddgvllltgs flplmfilmf sptvlsiirs ivwekekrlk eyqltvglrs wmiwaayfft
      301 ffffyifivs licvlvfaki fndpvfcysd ysfifvflmc yatasiffgf mvstffdkah
      361 laasagsliy fasffpfnsi aqhygrinla mkvaaclspn ialalgikll vkfetkqngv
      421 nwnniwtpas ledtltfgym mgmlvidafl yglvtwyiea vfpgqygipq pwyfflmhsy
      481 wfkpskprik ikkekmkdsg itqnkyfeae ptglvtgiki khlykelgdk vvinnmslnl
      541 ykgqitillg qngtgkttal siltghyppt rgevfidgyd itkniteire nlgfcpqgdl
      601 lfndltlseh lffysmvksi hqkmspnein hmlsafdmle kcdtfsksls ggmkrklsii
      661 iallggskvv ildepssgmd pvsrratwdv lqqfkrdrti lltthymdea dilgdriaim
      721 vkgtlqccgs siflkktyga gyhifmekep ycdlekicai iqshipdail esclgaelsf
      781 ilpkkhahrf ealfnvlemk keelgianfg asittmeevf lkvnkladse vesqsiqslh
      841 lmsqrsqnrn rskrvfrnye rpvitrlnei anikfntgfp lyrqqfhsmf lkralfnwrs
      901 wkltllhisi ilfvttyllt tlnlyytmpa remdlsqygr tivpysisgk svlalnlikn
      961 leiflklknq elrevqgnvm kyikeskeyr dfsliafsie veknntvfti ffnneayhsa
     1021 atslavfdnv lfmsvsgpna sikvsnkpqp lprygsntvp tsgsqvvlcl afglavvigs
     1081 fcvqtvtert tkakhiqfvs gvylltywls allwdliyfs itccfllgvf vycgvdafva
     1141 nfhfldtmmi fmlygwsvvp lmylgsllfs sstaayiklt lfnyfstvfs ivihiimkfy
     1201 dddisdftrt lmnnalmvlp synfamsisk ffddhevkkl canqfqniyv dcsdsfknnn
     1261 vysfgehgia nflissaalg lifllllfcl estfwnlrnf vfhkivfnvy kifmnnkkat
     1321 dsiqvikeyg dkdvinerkr vqrllprlta apllfneltk iyykcpvvka vrnisllvsk
     1381 yecfgllgln gagktttfkm ltgeeittsg vvlidginit enigkirsri gycpqsdpml
     1441 shmtgrevli myarlrgvpe pdigmyvetf lhsvhmetha dklvctysgg nkrklntaia
     1501 lmgkssvifl depstgmdpv arrhmwdtvt wicnsgkaii isshsmeece alctrlaimv
     1561 kgqfrclgsp rhlknkfgni ytltakinid dnedkleefk efieinfpgn iinqdhqgii
     1621 gyyipskgic wgkvfrimee aktlfnlvdy fisqitleqi fltfanidkk
//
LOCUS       XP_061008322            1171 aa            linear   MAM 02-DEC-2023
DEFINITION  von Willebrand factor A domain-containing protein 3A [Dama dama].
ACCESSION   XP_061008322
VERSION     XP_061008322.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152339.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1171
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1171
                     /product="von Willebrand factor A domain-containing
                     protein 3A"
                     /calculated_mol_wt=132000
     Region          156..311
                     /region_name="VWA_3"
                     /note="von Willebrand factor type A domain; pfam13768"
                     /db_xref="CDD:372716"
     Region          497..>605
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Site            order(504,572,604)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238119"
     Region          943..1112
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Site            order(952,1021,1046)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238119"
     CDS             1..1171
                     /gene="VWA3A"
                     /coded_by="XM_061152339.1:1..3516"
                     /db_xref="GeneID:133063216"
ORIGIN      
        1 matqisdvfh gqdstflenh cmrrnndrdp kkqlnqknin elgqkldngl lvthvnqtqd
       61 llrlqgdetq psvwensedw lsmhslkskk ltladlicqg tavleeassv pkkmhlptqt
      121 ahqfeaklse aielyqqriq wltenskkaf glikgarvgi lidvsavssg pqkeefqndl
      181 mnlideqlsc kdklyilsfg attsalwpsp tevsasslqe lklwvkklkp drgsnllqal
      241 kkvfvlkgln slvtimgscp dqpseilsdy iqqsttgrdl ithiitykcd dqvppavlkn
      301 lvegfggyyh cyspeteics srevdellae iqkaqslrdh vqalqpdapr eeptgamqei
      361 stevaksslm sllpkppkhe dplmiefpnl dmtstewlkt hslkakklsl yqvlapnafs
      421 pveefvpilr ktvsstihek amvqfewhdg tvknihvdlp flyeyqkqls ramrmyerri
      481 ewlslasrri wgtvcekrvv illdvsvtns myiihiqhsl rrlleeqlsn kdcfniiafg
      541 stieswrpem vaashsnlqs awrwvlslqc qgsrnvlsal rkavevdfkd kedqqsqgiy
      601 lftggipdqd mamlsaymae acggcdfhln vclfyvgesq tdtmppacya srtdtaaayr
      661 evtraaggrf hwfgdtgiye sddinaitse mekalnysqk callvsslkn rsgkgqesaa
      721 llkekpnvlq prsqprkfcp skptapsvar msvkddpdre krpplkalpw cplsgkagip
      781 aaaappvkkg taerrkktqs rdaetalllf ytetgnnvgs vykkypqrrg lrrtrssiel
      841 prkdtvcssq ewvanyglkk lkmevsrylg pncthqksvq tsasakycsv fpsieingtv
      901 rhiectprem evyithldkl mrryvqrlqw llsgsrrlfg vilerkvcvl ldtsgsmgpy
      961 lqqvkmeltl liweqlrkhc dsfnllsfae glqpwqdtll ettdaachka mrwvtclhaq
     1021 gstsvleall kafsfpdveg lylltdgkpd tscslilsev qrlkekrdvk vhtislncsc
     1081 rtaanflrdl aaltggryhc pvsedsllem qglltrgflh qrdpalplfe gddlrrlaqe
     1141 itkargflwq aqsirsqlqk knnpepkvap f
//
LOCUS       XP_061008323             456 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 180-like [Dama dama].
ACCESSION   XP_061008323
VERSION     XP_061008323.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152340.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..456
                     /product="transmembrane protein 180-like"
                     /calculated_mol_wt=51811
     Region          12..447
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(20..21,24..25,28,61,125..126,128..130,133,154,
                     157..158,161,251,254..255,258..260,263,291,295,347..348,
                     352,356,380,383..384,387..388,391)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:341034"
     CDS             1..456
                     /gene="LOC133063218"
                     /coded_by="XM_061152340.1:118..1488"
                     /db_xref="GeneID:133063218"
ORIGIN      
        1 mtflnikpia wafslitlgt emlnsvfsfy yvklflhlyk vsevafyqaq milmiwnaln
       61 dltgyfhnns kadccsnrhs svlygaplya aafllpwfpw kyyhegdwls glhlvvslca
      121 fdstltfvqq aqcvlfaeif tryesrlqli kinqvaslvg stsilfcgli sdnmeillnf
      181 qviavvvail ataslytgmc hlshlepkrs peenlfsetv qdlpwtsvvs lmrqiltqkn
      241 frlflivnff qvfhltffsn fmmifvdnli ptdvlpssir simygagfic pqclvlisqs
      301 wlrkfgyyki ilfsfylegt asivmlllgq qyyyflalyl tvimvivqas fclfnlplad
      361 mvdadllkfn rqsplssmvf ginalftkpa qslapmvils rlnqfgygnp nkstildlhd
      421 amfnliclvp lgiaaiqilv wspfsirkkt dytgvf
//
LOCUS       XP_061008324             336 aa            linear   MAM 02-DEC-2023
DEFINITION  basic proline-rich protein-like [Dama dama].
ACCESSION   XP_061008324
VERSION     XP_061008324.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152341.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..336
                     /product="basic proline-rich protein-like"
                     /calculated_mol_wt=34993
     CDS             1..336
                     /gene="LOC133063220"
                     /coded_by="XM_061152341.1:1..1011"
                     /db_xref="GeneID:133063220"
ORIGIN      
        1 maelppgrrs prppprrgrl vapgpkaaal agsqapeprr slpptrdpgk ckagpraags
       61 agrarttggf iprlrgragr gcaglgpppp rarplrraas ppalgsvpnp rgsssgsedp
      121 plpppagrpr ppgsvprppp rvhfpprvrf spiaglspps agppppkirp hlprrgsisp
      181 prvhlppprr gsappeggpp apecspprfg stfppqgppp prvrpsstvr ptpsrgsvar
      241 qrvhpqsres asppresafp rslghrpais rpgrpsqpga spvlksnarg pdllhlqres
      301 klfwevgggw ggerdtlvpi pegpslgplp rqgerp
//
LOCUS       XP_061008326             783 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: thyroid receptor-interacting protein 11-like
            [Dama dama].
ACCESSION   XP_061008326
VERSION     XP_061008326.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152343.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 26% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..783
                     /product="LOW QUALITY PROTEIN: thyroid
                     receptor-interacting protein 11-like"
                     /calculated_mol_wt=87315
     Region          <414..>778
                     /region_name="SCP-1"
                     /note="Synaptonemal complex protein 1 (SCP-1); pfam05483"
                     /db_xref="CDD:114219"
     CDS             1..783
                     /gene="LOC133063221"
                     /coded_by="XM_061152343.1:1..2352"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon"
                     /db_xref="GeneID:133063221"
ORIGIN      
        1 maaaaaarga ragqdggrpg gsyiasrprr gggggtapqa rspalaaslp aappacpags
       61 grarneerqa pggarsglrr ppggrvvppp pggslgpatr grlgrrgppa prrvcasaqr
      121 sparvififn slprldrkha vgkadtksgd pksrqkvtlg trppgralwg areakwngkg
      181 algrwkwfks lsgpslcagq irsvlrpgtm swfgglgltl ghslgqvggt vasltdyvss
      241 ftkdvlrkga ekveelpdsa rqevvdfesi lkseierlri lcsdleekye aselqlklqt
      301 asyrhqlhqk dieiklltar qaamkdellk lqsvtnsvnl qdsfqpstpa pfslgydvyq
      361 halpfqnddm dfadliwsqq einrlsnevl rleadvshwr hfaqtstaqg adsfnlkeiy
      421 klqntikele enrnkeiddh qlemavlqei hqqklaeisg rhrkqlkdye emihdmqkat
      481 qvlaaekvas tkkikgleir vkylkkklss vekemdalvr dqdqvnetnk rfkrgelkps
      541 ikkhsdavte nekvlpqrts leeasrqqqp lsdaenemmr lsslkqnknl ieenlklqkr
      601 aqvlekensl lnrekeelql slvklsneye piksstighm nldsevhhlr ydleikegkl
      661 nenttekkll ipelgeldrq kqkmtmcvvl mkdxqknegd siinklkqdl krkkkrvcql
      721 egdkmnitke ldgqkeklih lkmqkgqlea elcqaeqrll eerrkseqai kepsstenad
      781 ssa
//
LOCUS       XP_061008327             184 aa            linear   MAM 02-DEC-2023
DEFINITION  protein TNT [Dama dama].
ACCESSION   XP_061008327
VERSION     XP_061008327.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152344.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 15% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..184
                     /product="protein TNT"
                     /calculated_mol_wt=19828
     Region          29..184
                     /region_name="DUF4694"
                     /note="Domain of unknown function (DUF4694); pfam15765"
                     /db_xref="CDD:434919"
     CDS             1..184
                     /gene="C10H16orf82"
                     /coded_by="XM_061152344.1:1..555"
                     /db_xref="GeneID:133063222"
ORIGIN      
        1 mnkatksniq gwwrhttsnt qrppgpllle kpsqlpltfl qgrqgespsg eaqepgaglq
       61 sprlepqspa wpchdaeatq eplrdssghl gstvshdssv lssllhssle rcidisrlss
      121 gyagdeense vslpgshqim rlsrrlhtqa ggaqtnqvca vyspkqlkrr lacqanstsq
      181 tgre
//
LOCUS       XP_061008328             104 aa            linear   MAM 02-DEC-2023
DEFINITION  fertilization-influencing membrane protein [Dama dama].
ACCESSION   XP_061008328
VERSION     XP_061008328.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152345.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..104
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..104
                     /product="fertilization-influencing membrane protein"
                     /calculated_mol_wt=11697
     Region          22..104
                     /region_name="FIMP"
                     /note="fertilization-influencing membrane protein;
                     pfam17672"
                     /db_xref="CDD:465449"
     CDS             1..104
                     /gene="C10H16orf92"
                     /coded_by="XM_061152345.1:1..315"
                     /db_xref="GeneID:133063223"
ORIGIN      
        1 mrprqwvwvw mwllglgple sapsleraka sgqgaesplf ldrpdffdyp dsdqvkllav
       61 aqfigekpvi fansgsdsrl fhhilvgall vafffllfqf cthm
//
LOCUS       XP_061008329             738 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: zinc finger protein 304-like [Dama dama].
ACCESSION   XP_061008329
VERSION     XP_061008329.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152346.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 11% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..738
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..738
                     /product="LOW QUALITY PROTEIN: zinc finger protein
                     304-like"
                     /calculated_mol_wt=83252
     Region          90..130
                     /region_name="KRAB"
                     /note="KRAB box; pfam01352"
                     /db_xref="CDD:460171"
     Region          335..352
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          356..712
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          360..380
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          388..408
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          416..436
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(421,423,425,427..428,431..432,435,449,451,455..456,
                     459..460,463,477,479,481,483..484,487..488,491)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          444..464
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(444,447,460,464)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          472..492
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          500..520
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          528..548
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          556..576
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(561,563,565,567..568,571..572,575,589,591,595..596,
                     599..600,603,617,619,621,623..624,627..628,631)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          584..604
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(584,587,600,604)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          612..632
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          640..660
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          668..688
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(668,671,684,688)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          696..716
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..738
                     /gene="LOC133063224"
                     /coded_by="XM_061152346.1:1..2217"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:133063224"
ORIGIN      
        1 mgfegpspsl svlvrfrrrh pepvrrfdre etkarsstiv qgpphpggvr vpllprsssn
       61 hqfldqpvgg rldrcirlrn ilckyleggv tfedvfvyfs leewelleep qrllyrsvml
      121 enfahvaalg cwceadneea pseqsvcveg vsevrtpgsc pfiqkvhpye rsdpllkdif
      181 hlaehqgscp aqnldtrdpc grgfllsenf hqhqkphggn nxiqgdgdea scvkscatye
      241 lgrpltcrgk gmdvldsssl fqhqsthsgl spcrraefve sfahksslrr hqgdsdelmf
      301 fnctddekaf mnaftlldnq itqavevrsf rflpcgnlsk ekstlihhrk lhdgetshvc
      361 tecgkafihl shlkthqkfh tgkrqyacse cgkafsrkdt lvqhqrvhtg ersydctecg
      421 kaysrsshlv qhqrihtger pykcsecgka fsrkdtlvqh qrfhtgerpy ecsecgkffs
      481 qsshliehwr ihtgarpyec iecgkffshn sslikhrrvh tgaksyvcgk cgkafgckdt
      541 lvqhqiihtg arpyecsecg kafsckdtlv qhrkihtger pyecndcgkf fshssnlivh
      601 qrihtgakpy ecsecgkcfs hnsslilhqr vhsgarpyvc secgkayiss shlvqhqkvh
      661 tgvrpyecse cgkffsrnss lilhqrvhtg ekpyvcsecg kaysrsahlv qhqkahpgeg
      721 rhecnsfgdp laaslklv
//
LOCUS       XP_061008330            1017 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 48 [Dama dama].
ACCESSION   XP_061008330
VERSION     XP_061008330.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152347.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1017
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1017
                     /product="zinc finger protein 48"
                     /calculated_mol_wt=112130
     Region          125..146
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          126..146
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(131,133,135,137..138,141..142,145,159,161,165..166,
                     169..170,173,211,213,215,217..218,221..222,225)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          138..161
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          154..174
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(154,157,170,174)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          202..618
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          206..226
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          234..254
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          289..309
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          317..337
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(322,324,326,328..329,332..333,336,350,352,356..357,
                     360..361,364,378,380,382,384..385,388..389,392)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          345..365
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(345,348,361,365)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          373..393
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          467..924
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          472..492
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(477,479,481,483..484,487..488,491,505,507,511..512,
                     515..516,519,569,571,573,575..576,579..580,583)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          500..520
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(500,503,516,520)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          564..584
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          592..612
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(592,595,608,612)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          768..788
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(773,775,777,779..780,783..784,787,801,803,807..808,
                     811..812,815,829,831,833,835..836,839..840,843)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          796..816
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(796,799,812,816)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          824..844
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          852..872
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          880..900
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          908..928
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          920..943
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          936..956
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          948..971
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     CDS             1..1017
                     /gene="ZNF48"
                     /coded_by="XM_061152347.1:148..3201"
                     /db_xref="GeneID:133063225"
ORIGIN      
        1 meravgpwgp dlrgseereq lrgartgegr sgappwaglg nehaeisqpd efehapqedd
       61 lefkeeedla pghevgnasl kpegiqtwdd lwvqregpgk pqardrgprl lgeprwgqas
      121 draavcgecg ksfrqmsdlv khqrthtgek pykcgvcgkg fgdssarikh qrthsgekpy
      181 rarapaqgpp kiprsripag erpticgecg ksfrqssdlv khqrthtgek pykcgicgkg
      241 fgdssarikh qrthrgeqpp rpvvprrqps raataaaqgp kaqekpyict dcgkrfvlsc
      301 sllshqrshl gpkpfgcdvc gkefargsdl vkhlrvhtge kpylcpecgk gfadssarvk
      361 hlrthsgerp hacpecdrtf slsstllrhr lthmepqdfs fpgyplapli pspppssspp
      421 ppplgtsppl tprspshsgd gpfglpglep epggpqagep ppplagdkph kcpecgkgfr
      481 rssdlvkhhr vhtgekpylc pecgkgfads sarvkhlrth rgerarpppp stllrphnpp
      541 gpaptasrsr vraqpsgpsq phvcgfcgke fprssdlvkh rrthtgekpy kcaecgkgfg
      601 dssarikhqr ghlilrpfgt gdgrakplke epstglewqf gpdawvlwpl plgggvcvln
      661 qwpvaseatp tprprsrgva ecptarrpgl gqrerpnlrl dtkmpgeqqt eeeeeeemqe
      721 emvllvkgee eegeekyevv klkipmdnke vpseapapsa dparphacrd cgrafarrst
      781 lakhvrihtg erpfactecg rrfsqksalt khsrthtger pyecpecdkr fsaasnlrqh
      841 rrrhtgekpy acaqcgrrfa qssnyaqhlr vhtgekpyac pdcgrafggs sclarhrrth
      901 tgerpyacad cgtrfaqssa lakhrrvhtg ekphrcpvcg rgfghrsnla eharthtger
      961 pypcsecgrr frlsshfirh rrahmrrrly icagcgrdfk lpagatater cpdcegs
//
LOCUS       XP_061008331             145 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133063226 [Dama dama].
ACCESSION   XP_061008331
VERSION     XP_061008331.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152348.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..145
                     /product="uncharacterized protein LOC133063226"
                     /calculated_mol_wt=14072
     CDS             1..145
                     /gene="LOC133063226"
                     /coded_by="XM_061152348.1:1..438"
                     /db_xref="GeneID:133063226"
ORIGIN      
        1 mlrffptlat tararghflg spmpspaaar asasaptags papevnvarv svsgptrtsr
       61 wgpaetsgar wspkadkaas psegatpdea vgsrkgvtad tpaaapvama pvpapassps
      121 lvitvpsasp stasvkgpaa dptah
//
LOCUS       XP_061008332             205 aa            linear   MAM 02-DEC-2023
DEFINITION  cardiotrophin-2-like [Dama dama].
ACCESSION   XP_061008332
VERSION     XP_061008332.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152349.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..205
                     /product="cardiotrophin-2-like"
                     /calculated_mol_wt=22703
     Region          25..198
                     /region_name="LIF_OSM"
                     /note="LIF / OSM family; cl21565"
                     /db_xref="CDD:419736"
     CDS             1..205
                     /gene="LOC133063227"
                     /coded_by="XM_061152349.1:1..618"
                     /db_xref="GeneID:133063227"
ORIGIN      
        1 mtshlmapfc lltlllppls lgaptstaes itqaynlald mqmqtsallq tylehqgrpf
       61 sgpgfsipel slrtlpstdm plekwnglee rvrlsltqqa fwsfsqhlll avrdqndisp
      121 lndnsivvdq lwearlkakg laiklvsimt alglhtppan plgtvpygds afhkkcrgyv
      181 iirdysfwtd ravtflgelk akyse
//
LOCUS       XP_061008333             204 aa            linear   MAM 02-DEC-2023
DEFINITION  cardiotrophin-2-like [Dama dama].
ACCESSION   XP_061008333
VERSION     XP_061008333.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152350.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..204
                     /product="cardiotrophin-2-like"
                     /calculated_mol_wt=22268
     Region          25..197
                     /region_name="LIF_OSM"
                     /note="LIF / OSM family; cl21565"
                     /db_xref="CDD:419736"
     CDS             1..204
                     /gene="LOC133063229"
                     /coded_by="XM_061152350.1:1..615"
                     /db_xref="GeneID:133063229"
ORIGIN      
        1 mtshlmapfc lltlllppls lgaptstaes itqaynlald mqmqtsallq tylehqgtpf
       61 sdpdfsspgl slitlpstdm pfeiwhgled gerlsltqea fwsfsqhfql akddqsdlnp
      121 gnsivvgqle earlkakgla gnlagimtal dlltppentp lgsvplgdsv ferkcrgyvi
      181 irdysfwtdr avtflgelka kyse
//
LOCUS       XP_061008334             855 aa            linear   MAM 02-DEC-2023
DEFINITION  polyserase-2 [Dama dama].
ACCESSION   XP_061008334
VERSION     XP_061008334.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152351.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..855
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..855
                     /product="polyserase-2"
                     /calculated_mol_wt=91898
     Region          47..289
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            47
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(87,139,243)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(237,262,264)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     Region          326..527
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cl21584"
                     /db_xref="CDD:473915"
     Region          601..783
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cl21584"
                     /db_xref="CDD:473915"
     CDS             1..855
                     /gene="PRSS36"
                     /coded_by="XM_061152351.1:1..2568"
                     /db_xref="GeneID:133063230"
ORIGIN      
        1 msqhlllplv ilaispipga fqdsalsptq eepedldcgr pepsarivgg sdsqpgtwpw
       61 qvslhhgggh icggsliaps wvlsaahcfv tngtlepaae wsvvlgvhsq dgpldgahvr
      121 avaailvpdn yssvergadv allrlaspar lgpsarpvcl prashrfahg tacwatgwgd
      181 vqeedplplp wvlqevelrl lgeaacqcly srpgpfnltf qllpgmlcag ypegrrdtcq
      241 gdsggplvce eggrwfqagi tsfgfgcgrr nrpgvftava pyeawireqv sgsepgpafp
      301 tqpleaqsgl pepmnencti alpecgkarr pgawpweaqv mvpgsrpcyg alvseswvla
      361 pascfpghis sdrppsdldy wrvqlpsrpr aeqvarlvph enaswddasn lallqlrapv
      421 nlsaaprpvc lphpehyflp gsrcrlarwg rgepapgass lleaellgaw wchclygrqg
      481 asvpppgepp qalcpayqee eaegscwnys hwsllcreeg twflagirdf psdclrprvf
      541 yplqthgpwi shvtrgayle dqlawdwgpe geeteaqtcp phtengacgl rpepalmgvl
      601 wpwlaevhva gervcagilv apgwvlaath cvlrpgsttv pyievylgra gasplpqshq
      661 vsrlvisirl prhlglrppl allelssrve pspsalpicl hpggtplgas cwvlgwkdpq
      721 drvpvaaavs ilmprlchcl yqgllppgtl cvlyaegqed rcevtsappl lcqteggswv
      781 lvgmavrgsr elfaatgpee awisqtvgea pflpssgfph wltegsdlcp pdmarasgsp
      841 raalfllllt pliqg
//
LOCUS       XP_061008335             322 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 7A17-like [Dama dama].
ACCESSION   XP_061008335
VERSION     XP_061008335.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152352.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..322
                     /product="olfactory receptor 7A17-like"
                     /calculated_mol_wt=35665
     Region          26..301
                     /region_name="7tmA_OR7-like"
                     /note="olfactory receptor family 7 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15234"
                     /db_xref="CDD:320362"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320362"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320362"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,252,255..256,258..259,262,
                     268..269,271..273,276,279..280)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320362"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320362"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320362"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320362"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320362"
     Region          269..294
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320362"
     CDS             1..322
                     /gene="LOC133063231"
                     /coded_by="XM_061152352.1:1..969"
                     /db_xref="GeneID:133063231"
ORIGIN      
        1 mepwnltgvs efillgfske pelqtlifvi flsmylitvf gnlliilatv ydshlhtpmy
       61 fflsnlsfad icfttttvpk mlvniqtqsk vityagcitq myfflffsgl diylltvmay
      121 drfvaichpl hyvvimnprl cgllllvtwi isvlhsllqs lmvlrlsfct dveiphffce
      181 lnqmvqlacc dtflnnvvmy faavllaggp laailfsysk ivssirgiss aqgkqaafst
      241 cvshlsivsl ffctslgvyl ssaathrshs sakasvmyav vtpmlnpfiy slrnkdikga
      301 lkrflgmavi kgtvvtglks cl
//
LOCUS       XP_061008337             312 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 7A10-like [Dama dama].
ACCESSION   XP_061008337
VERSION     XP_061008337.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152354.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..312
                     /product="olfactory receptor 7A10-like"
                     /calculated_mol_wt=35016
     Region          25..301
                     /region_name="7tmA_OR7-like"
                     /note="olfactory receptor family 7 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15234"
                     /db_xref="CDD:320362"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320362"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320362"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,252,255..256,258..259,262,
                     268..269,271..273,276,279..280)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320362"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320362"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320362"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320362"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320362"
     Region          269..294
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320362"
     CDS             1..312
                     /gene="LOC133063232"
                     /coded_by="XM_061152354.1:1..939"
                     /db_xref="GeneID:133063232"
ORIGIN      
        1 mqqenhtqfs gflllglsde aelqpllfwl flsmylitis gnlliiltti ydshlhtpmy
       61 fflsnlsfsd icftsttipk mllnlyiqnk gityegcltq lyffilfael difllsamay
      121 drfvaichpl hyttkmnpql cvllllaswi lsvldsllrg llvlqlsfct dveiphffce
      181 inqviqlaws dnllnitemy fatvlmgiip fsgivvsysr ivssvlrits argkykafst
      241 cgshlsvvcl fygtglgvyl ssattqnsrt saiasvmytv vtpmlnpfiy slrnkdikga
      301 lkslvstvtf ne
//
LOCUS       XP_061008338              81 aa            linear   MAM 02-DEC-2023
DEFINITION  cytochrome c oxidase subunit NDUFA4-like [Dama dama].
ACCESSION   XP_061008338
VERSION     XP_061008338.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152355.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..81
                     /product="cytochrome c oxidase subunit NDUFA4-like"
                     /calculated_mol_wt=8999
     Region          12..79
                     /region_name="B12D"
                     /note="NADH-ubiquinone reductase complex 1 MLRQ subunit;
                     pfam06522"
                     /db_xref="CDD:461937"
     CDS             1..81
                     /gene="LOC133063234"
                     /coded_by="XM_061152355.1:1..246"
                     /db_xref="GeneID:133063234"
ORIGIN      
        1 mstypsvgqa kkhpsltpff ifigaggtaa slyvlhlalf npdiswdrqn npetwnklgs
       61 dgqyksysvn adyrklkked f
//
LOCUS       XP_061008340             163 aa            linear   MAM 02-DEC-2023
DEFINITION  BICD family-like cargo adapter 1 [Dama dama].
ACCESSION   XP_061008340
VERSION     XP_061008340.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152357.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..163
                     /product="BICD family-like cargo adapter 1"
                     /calculated_mol_wt=18283
     Region          <46..>137
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..163
                     /gene="LOC133063235"
                     /coded_by="XM_061152357.1:1..492"
                     /db_xref="GeneID:133063235"
ORIGIN      
        1 mlqdqngvpg qegrakghvl rlphpadksl srqatlsvwg prgspesqaa ealgdtqtep
       61 sldqvlrerd daiakkrave aeldtcrakl raveaqllev leeklrlrqe veaweedmqr
      121 lvrqqvesql qresqsapga ptdpgtarnp wirfplsrwg hwr
//
LOCUS       XP_061008341             436 aa            linear   MAM 02-DEC-2023
DEFINITION  beta/gamma crystallin domain-containing protein 1-like [Dama dama].
ACCESSION   XP_061008341
VERSION     XP_061008341.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152358.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 20% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..436
                     /product="beta/gamma crystallin domain-containing protein
                     1-like"
                     /calculated_mol_wt=47437
     CDS             1..436
                     /gene="LOC133063236"
                     /coded_by="XM_061152358.1:4162..5472"
                     /db_xref="GeneID:133063236"
ORIGIN      
        1 mlpeseaalp vraqsednrk plkaestatn fpdyrsylet pqrpsqsvvn gqgspaslln
       61 isagsddsvf dsspdmekft eiikkmdstv cmpqkkkkpr lpsfpaphfa mwpiqedsle
      121 kvfdpsvftf glgkknegql emsaashlmq nldtksklgp krssteqsvl fkslqthtng
      181 kgeppaapev ndkenkdvpn ggvkrsrlek svlfstllss lpqdkifsps vtsvntmtts
      241 fstahssfsr psmlqpvaes apscgsekeq pslpasnlkl fnfnssdtsh sglkslspme
      301 kclqkeetkk dldqrsnlpt pgtkfsefsk letngdrsnh tesvlklnlp sygsgdtdft
      361 glfkasrfdp sisfsgmals dtttlrgsvq nkinlqpgkv viysepsvse acievfsdve
      421 dcsswtlspv iqvkvi
//
LOCUS       XP_061008343             327 aa            linear   MAM 02-DEC-2023
DEFINITION  nascent polypeptide-associated complex subunit alpha,
            muscle-specific form-like [Dama dama].
ACCESSION   XP_061008343
VERSION     XP_061008343.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152360.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..327
                     /product="nascent polypeptide-associated complex subunit
                     alpha, muscle-specific form-like"
                     /calculated_mol_wt=34469
     Region          <53..307
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..327
                     /gene="LOC133063238"
                     /coded_by="XM_061152360.1:1..984"
                     /db_xref="GeneID:133063238"
ORIGIN      
        1 mfvrrtgicr slevlelpek rlrgaggvmw fqpwpeyrea letvckpgqd vntakfqkvf
       61 ssspcmrdpr aetppqdgsl qrsrvegtpa drrlpqsppg gpfrlhlvcp gstaagagpa
      121 sallqagftp aadscdpsrv lvprtagepq prllrgpspk grtesplrcl wrpacewgsr
      181 mqglgvagtc sptqsrgrag erggatfepp plgfgsqrge gsesketker gsgarpettp
      241 vsaphlrsrg ptpsaptvca pstrsphvls lpvldrpapp apnptlpspk lhlrapspgq
      301 prvprppvld ppaspapaar apnpptp
//
LOCUS       XP_061008344             867 aa            linear   MAM 02-DEC-2023
DEFINITION  multifunctional procollagen lysine hydroxylase and
            glycosyltransferase LH3 [Dama dama].
ACCESSION   XP_061008344
VERSION     XP_061008344.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152361.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..867
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..867
                     /product="multifunctional procollagen lysine hydroxylase
                     and glycosyltransferase LH3"
                     /calculated_mol_wt=97984
     Region          166..395
                     /region_name="GT_LH3"
                     /note="catalytic glycosyltransferase (GT) domain found in
                     lysyl hydroxylase 3 (LH3) and similar proteins; cd23002"
                     /db_xref="CDD:438558"
     Site            order(173..175,204,218,241..242,244,382,384)
                     /site_type="other"
                     /note="UDP binding site [chemical binding]"
                     /db_xref="CDD:438558"
     Site            order(241,244,382)
                     /site_type="other"
                     /note="Mn binding site [ion binding]"
                     /db_xref="CDD:438558"
     Region          415..>545
                     /region_name="BcsA"
                     /note="Glycosyltransferase, catalytic subunit of cellulose
                     synthase and poly-beta-1,6-N-acetylglucosamine synthase
                     [Cell motility]; COG1215"
                     /db_xref="CDD:440828"
     Region          702..865
                     /region_name="P4Hc"
                     /note="Prolyl 4-hydroxylase alpha subunit homologues;
                     smart00702"
                     /db_xref="CDD:214780"
     CDS             1..867
                     /gene="PLOD3"
                     /coded_by="XM_061152361.1:1..2604"
                     /db_xref="GeneID:133063239"
ORIGIN      
        1 mtsgdecsca caessrrnlg sgspaavpal ppppgrappp lvqlcrrpgt ilalsrapas
       61 gvfcnlrlrl fffffffppp grspnrapps cwpysspgpf sespspelgs kadsqsrvra
      121 cmqlgplsam asgpglrpll lllllspspa asasdrprgs dpvnpekllv itvatakteg
      181 yrrflqsaef fnytvrtlgl geewrggdva rtvgggqkvr wlkkemekya eredmvimfv
      241 dsydvvlags psellkkfvq sgsrllfsae sfcwpewala eqypevgtgk rflnsggfig
      301 faptihqivr qwkykddddd qlfytrlyld pglreklgln ldhksrifqn lngaldevvl
      361 kfgrnrvrir nvaydtlpvv vhgngptklq lnylgnyvpn gwtpeggcgf cnqdrrllpg
      421 gqppprvlla vfveqptpfl prflqrllll dyppdrvtlf lhnnevyhep hiddswpqlq
      481 dhfsavklvg peealtpgea rdmamdicrq dpkcefyfsl dadtvltnpq tlrilieanr
      541 kviapmlsrh gklwsnfwga lspdeyyars edyvelvqrk rvgvwnvpyi sqayvirget
      601 lrtelpqrev fsgsdtdpdm afckslrdkg iflhlsnqne fgrllatsry dtdhlhpdlw
      661 qifdnpldwk eqyihenysr alegeglveq pcpdvywfpl lseqmcdelv eemehygqws
      721 ggrhedsrla ggyenvptvd ihmkqvgyed qwlqllrtyv gpmteslfpg yhtktravmn
      781 fvvryrpdeq pslrphhdss tftlnvalnh kgldyegggc rflrydcvis sprkgwgllh
      841 pgrlthyheg lpttrgtryi mvsfvdp
//
LOCUS       XP_061008345             629 aa            linear   MAM 02-DEC-2023
DEFINITION  mucin-2-like [Dama dama].
ACCESSION   XP_061008345
VERSION     XP_061008345.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152362.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..629
                     /product="mucin-2-like"
                     /calculated_mol_wt=63131
     Region          <42..>338
                     /region_name="ser_rich_anae_1"
                     /note="serine-rich protein; NF033849"
                     /db_xref="CDD:468206"
     Region          <332..>615
                     /region_name="ser_rich_anae_1"
                     /note="serine-rich protein; NF033849"
                     /db_xref="CDD:468206"
     CDS             1..629
                     /gene="LOC133063244"
                     /coded_by="XM_061152362.1:151..2040"
                     /db_xref="GeneID:133063244"
ORIGIN      
        1 mlvtwilpmv fwlwvpntas ssatatstss gttttdyait tsttvsenst ttsgplkssv
       61 ssasplttal gsstttsgqs kstvssedak aavqlsyttt fdqsestdss esahstsgql
      121 kstvsskgpl ttvlesspnt sgqsestiss qgsptrvtgs sattsvlses tqsesshtts
      181 gqseftvsse ssfttvpwss istsgqsept vsseasptgi pgsstttsvl sestvssegs
      241 lttvlwsstt tfdqtgstvs seaspttspg sfittsdqse ptvssesths tsgqsestvs
      301 segspttvpg sftttsvlse ptvspessht ttgqsestds seaspttvpv tfittsgqse
      361 stvssevspt rvtgsstttl vlsestvyse sshmtsgqse htvsseassa tvpgsftsts
      421 aqsestvfse sfpttalggv tttsvlsept vspesshtss dqsestvssd tspttvpgtf
      481 ittsgqsest vssdsslttv tgnstitsvl sestvspess httsdqsest vssegsqttv
      541 llsstttfdh septfssess httsgqsest vstewsptag pgtstttsvl septvspess
      601 httsgqsest vssdaspttv sgsstttlf
//
LOCUS       XP_061008347            2883 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: zonadhesin [Dama dama].
ACCESSION   XP_061008347
VERSION     XP_061008347.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152364.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 7% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2883
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2883
                     /product="LOW QUALITY PROTEIN: zonadhesin"
                     /calculated_mol_wt=314842
     Region          41..202
                     /region_name="MAM"
                     /note="Meprin, A5 protein, and protein tyrosine
                     phosphatase Mu (MAM) domain. MAM is an extracellular
                     domain which mediates protein-protein interactions and is
                     found in a diverse set of proteins, many of which are
                     known to function in cell adhesion. Members...; cd06263"
                     /db_xref="CDD:99706"
     Region          211..365
                     /region_name="MAM"
                     /note="Meprin, A5 protein, and protein tyrosine
                     phosphatase Mu (MAM) domain. MAM is an extracellular
                     domain which mediates protein-protein interactions and is
                     found in a diverse set of proteins, many of which are
                     known to function in cell adhesion. Members...; cd06263"
                     /db_xref="CDD:99706"
     Region          369..534
                     /region_name="MAM"
                     /note="Domain in meprin, A5, receptor protein tyrosine
                     phosphatase mu (and others); smart00137"
                     /db_xref="CDD:214533"
     Region          <532..836
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          <752..>1006
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          1024..1073
                     /region_name="TIL"
                     /note="Trypsin Inhibitor like cysteine rich domain;
                     pfam01826"
                     /db_xref="CDD:460351"
     Site            order(1033,1035,1046,1050)
                     /site_type="other"
                     /note="reactive site [polypeptide binding]"
                     /db_xref="CDD:410995"
     Region          1075..1128
                     /region_name="TILa"
                     /note="TILa domain; pfam12714"
                     /db_xref="CDD:432736"
     Region          1135..1287
                     /region_name="VWD"
                     /note="von Willebrand factor type D domain; pfam00094"
                     /db_xref="CDD:459671"
     Region          1328..1401
                     /region_name="C8"
                     /note="This domain contains 8 conserved cysteine residues;
                     smart00832"
                     /db_xref="CDD:214843"
     Region          1404..1457
                     /region_name="TIL"
                     /note="trypsin inhibitor-like cysteine rich domain;
                     cd19941"
                     /db_xref="CDD:410995"
     Site            order(1413,1417,1430,1434)
                     /site_type="other"
                     /note="reactive site [polypeptide binding]"
                     /db_xref="CDD:410995"
     Region          1459..1513
                     /region_name="VWC"
                     /note="von Willebrand factor type C domain; cl17735"
                     /db_xref="CDD:450195"
     Region          1520..1673
                     /region_name="VWD"
                     /note="von Willebrand factor type D domain; pfam00094"
                     /db_xref="CDD:459671"
     Region          1720..1787
                     /region_name="C8"
                     /note="This domain contains 8 conserved cysteine residues;
                     smart00832"
                     /db_xref="CDD:214843"
     Region          1790..1845
                     /region_name="TIL"
                     /note="Trypsin Inhibitor like cysteine rich domain;
                     pfam01826"
                     /db_xref="CDD:460351"
     Site            order(1799,1803,1816,1822)
                     /site_type="other"
                     /note="reactive site [polypeptide binding]"
                     /db_xref="CDD:410995"
     Region          1847..1902
                     /region_name="TILa"
                     /note="TILa domain; pfam12714"
                     /db_xref="CDD:432736"
     Region          1909..2061
                     /region_name="VWD"
                     /note="von Willebrand factor type D domain; pfam00094"
                     /db_xref="CDD:459671"
     Region          2113..2180
                     /region_name="C8"
                     /note="C8 domain; pfam08742"
                     /db_xref="CDD:462584"
     Region          2184..2240
                     /region_name="TIL"
                     /note="trypsin inhibitor-like cysteine rich domain;
                     cd19941"
                     /db_xref="CDD:410995"
     Site            order(2193,2197,2208,2217)
                     /site_type="other"
                     /note="reactive site [polypeptide binding]"
                     /db_xref="CDD:410995"
     Region          2242..2295
                     /region_name="TILa"
                     /note="TILa domain; pfam12714"
                     /db_xref="CDD:432736"
     Region          2303..2456
                     /region_name="VWD"
                     /note="von Willebrand factor type D domain; pfam00094"
                     /db_xref="CDD:459671"
     Region          2515..2589
                     /region_name="C8"
                     /note="This domain contains 8 conserved cysteine residues;
                     smart00832"
                     /db_xref="CDD:214843"
     Region          2592..>2635
                     /region_name="TIL"
                     /note="Trypsin Inhibitor like cysteine rich domain;
                     pfam01826"
                     /db_xref="CDD:460351"
     Site            order(2601,2605,2618,2622)
                     /site_type="other"
                     /note="reactive site [polypeptide binding]"
                     /db_xref="CDD:410995"
     Region          <2690..2733
                     /region_name="VWC"
                     /note="von Willebrand factor type C domain; cl17735"
                     /db_xref="CDD:450195"
     Region          2738..2768
                     /region_name="EGF"
                     /note="EGF-like domain; pfam00008"
                     /db_xref="CDD:394967"
     CDS             1..2883
                     /gene="ZAN"
                     /coded_by="XM_061152364.1:1..8652"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /db_xref="GeneID:133063245"
ORIGIN      
        1 mappvwtlvl llgaalprke kppdwkpltr ssrensilth cdfeddsrpl cdwsqatkdd
       61 gdwtresqps pasgtgppgg ypsgegyylh mdssafhpgg varlrsppiw eqgplcmrfa
      121 yymfglswga qlklwlvsda kgkhpnllwk hvntqspswi ptavtvplgl vlpsrlifeg
      181 twgsttyldi aldaisirrg scnrvcmmqt cnfdtlkdlc gwswistpsg akwvqkkgpt
      241 gvqnvgpegd fsspgdgyym lldpknakas qksvllspli qssgclslsf hyvlrgrspg
      301 agfiayasvl gsirkhtifs gqpgpnwqpv svnytgqgqi qftlvgvfak ipepavavda
      361 isiapcgesf pqcdfedkdh pfcdwvqvlq dgghwtqgsa ntlihgtgpf gislsgeshf
      421 vyleadkfsq egqsyklvsr pfcapgaicv aftyhmdgrg kgtklrlqlg spagsppssl
      481 wervgsqgpd wlnesttips ghqqpmqlmf evergshaaf vvalgfifis qgtcrgktgp
      541 qapergpcsg msrsastall pkplgpptgp setpahtekp vtpeetptts seispvhtek
      601 pvtpeetstt sseispvhte kpvtpeetst tsseifpvht ekpvaatekp tvpsetppvp
      661 tekpvvpaek ptvpterptv ptekptilpe eptflpewpf vppegptipt ekptvptekt
      721 ttptkkttip tekptiltee ptflpewpfs psewppvpte kptipaektt iptekttipt
      781 ektmvptekt tiptekttvp tkkttiptek ttistekttv ptekttipte kttvptektt
      841 fptekttvst kkttiptekt aiptekttis iekttvptek ttiltkktti ptekttiste
      901 kttiptektt iptekttvpt ekttiptekt tvptkkttip tkkttiptek ttvptkktti
      961 ptkkttiptg kpavpterpt tpmtpqpspa lvptqptvft mpstsmtpvt pattttprpt
     1021 pamcppnahy ercacpascq spkptcgllc kpgcvcnsgf lfndsrcina sscncfynen
     1081 yyksgtewfs pnctehcrcq pgsqiecqpy tcgthtvcql khgqygchpy gtatcfvygd
     1141 phyftfdgry fnfmgkctyv laqpcgnste pffrvtvkne ergqegascl skvsvtlset
     1201 titllkgrht lvggqrvtlp aipsegvflt psgrfvqlqt afglrvrwdg dqqlyvrvps
     1261 tfssklcgfc gnydgdssnd nqkpdgrpaq dekelgnswq tsededqacq enqaslpscn
     1321 tdlkntlsgp eycgrlavdy gafqaclphl kvssfydncm ldmcnfqglq qilcahmsal
     1381 tetcqeagya vkpwrgpqfc placppnsry tlcaklcpdt chstfsgmac qnrcvegcec
     1441 nqgfvlsglq cvpqsecgcl dptagyfkig erwfkpgcrr lcicegtnrt rcvpwqcqaq
     1501 etcgrqdgty gchpqgsatc tvwgdphylt fdgalhhfmg tctyiltrpc llkslenyff
     1561 vsatnefrgg nleasyvkav qvqafgirvw mlkgrkvmld grqvalplwf ahsrmtvrss
     1621 gsfillytdf glqvrydgyh lvevtapssy agrlcgmcgn ynnnslddnl qpdkrpavns
     1681 vrlgaswkln elsesgcfaa darpprclek natdpwsknc dilvnpqgpf skchrvvape
     1741 asftscvygq cgtmgdaftl crslqayaal caragqvlaw rnstfcplkc psgstyspca
     1801 dpcpatclsl stqsycpssl pcaegcecqr ghilsgttcv plgecgctsp gsayhpvger
     1861 wytdntcsrl ctcsihnnis clqtackpgq mcwprdglmr crgagmgvcr iqdrsqyisf
     1921 dgsyhavrga ctyvlaktch stmdlpffki sgkngkqqdq phtfylrtvy vhvfnslvtl
     1981 kkdhalingt wvplpatsqi rgvkvisrdg ymvltisigv evkfdgngfl eieipkayyg
     2041 ktcgmcgnfn geeedellmp ndelapddvt yvdswqdkei dpncrdddki keeseeepet
     2101 acqpadlera qeqcravfqt pgwarcasrv ilspflvkct dslcefggls salcqslqaf
     2161 saacqargir ppiwrnssfc pldcpthyvy tncfphcppt cdnpegrckg asgpsicqeg
     2221 cvcepgyvqk qrrcvprsqc gcrdargrdl pegnawfsss csqrctcrag aiqcrpfacp
     2281 agsqcktded gkeickphks erctvygdpt yrtfdglgyr fqgrmtyylv ktvdvlpngv
     2341 epfivegrnk myashtpvfl heiivmvygy tvqlqhelel vvngqkvtap yepvdqlrvs
     2401 lrsdrlfvit dfelvvsfng knnavislpv tyrklvlglc gncdqnkrnd fmlpngavtq
     2461 nllafgnswe vkmtegsfpr vsravheeev keeaalgfrg msgchpeelq linrtqacgv
     2521 lvdpegpfaa chqtvapepf lehcvsdlca ardpkeqeel rcqvlsgyai icqeagatpa
     2581 swrdhthcal scpantvyqs cmtpcpasca tlaaprgctg pcvegcaslp gyvysgaqsl
     2641 pwptaaartt asttrsgigr prgsagakgq talearqtpr fpgllrlqqg dgfvnddcsq
     2701 rctcartgll lceplgcspg evctvgnltr gcfrdspclq npcqndgrcr eqgthftcec
     2761 epgyggdrct eprdvpppee pgksftpdly phklltfptn ngrriktsnf asillpllvp
     2821 mvvivpaavt recisrkkrr rekmqsqtrd kppgtgpaal qgegghlgal tgdrreavei
     2881 lpn
//
LOCUS       XP_061008348             610 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box only protein 24 [Dama dama].
ACCESSION   XP_061008348
VERSION     XP_061008348.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152365.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..610
                     /product="F-box only protein 24"
                     /calculated_mol_wt=67555
     Region          62..107
                     /region_name="F-box_FBXO24"
                     /note="F-box domain found in F-box only protein 24
                     (FBXO24) and similar proteins; cd22098"
                     /db_xref="CDD:438870"
     Site            order(66,70,73..74,77..78,82,84..85,89..91,93)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438870"
     Region          <388..>447
                     /region_name="ATS1"
                     /note="Alpha-tubulin suppressor ATS1 and related RCC1
                     domain-containing proteins [Cell cycle control, cell
                     division, chromosome partitioning, Cytoskeleton]; COG5184"
                     /db_xref="CDD:444065"
     CDS             1..610
                     /gene="FBXO24"
                     /coded_by="XM_061152365.1:1..1833"
                     /db_xref="GeneID:133063246"
ORIGIN      
        1 mgektapfak eeagelelfe teikeskrga lgrlqavvkr scpscgpsep ggeekgrgnp
       61 vsvqlfppel vehivsflpv rdvvalgqtc hyfhqvcdae gvwrrichrl sprlreqgsg
      121 vrpwkraail nytkglyfqa fggrrrclsk svapqlahgy rrflptkdhv fildyagtlf
      181 flknalvsst lgqmqwkrac ryvvlcrgak dfasdprcdt vyrkylyvla treqpgvvgt
      241 tssracdcve vylqssgqrv fkmtfhhsms fkqivlvgqe tqrallllte egkiyslvvn
      301 etqldqprsy tvqlalrkvs rclphlrvac masnqsstly itdqggvyfe vhtpgvyrdl
      361 fgtlqafdpl dqqmplalsl pakilfcalg ynhlglvdef grifmqgnnr ygqlgtgdkm
      421 drgeptqvry lqrpialwcg lnhslvlsqg sdfskellgc gcgaggrlpg wpkgsasfvk
      481 lhikvraqap vplcacslcs treclymlss hdiehhpayr dlpaskavgn pepslgagap
      541 qdpggvawac eeylsqihnc ptlqdrmekm keivgwmplm aaqkdffwea ldmlqraagg
      601 agqgppppes
//
LOCUS       XP_061008349            1134 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein with KRAB and SCAN domains 1 [Dama dama].
ACCESSION   XP_061008349
VERSION     XP_061008349.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152366.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1134
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1134
                     /product="zinc finger protein with KRAB and SCAN domains
                     1"
                     /calculated_mol_wt=128560
     Region          52..162
                     /region_name="SCAN"
                     /note="leucine rich region; smart00431"
                     /db_xref="CDD:128708"
     Region          227..266
                     /region_name="KRAB_A-box"
                     /note="KRAB (Kruppel-associated box) domain -A box;
                     cd07765"
                     /db_xref="CDD:143639"
     Region          355..371
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <357..537
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          379..399
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          407..427
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          435..455
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(440,442,444,446..447,450..451,454,468,470,474..475,
                     478..479,482,496,498,500,502..503,506..507,510)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          463..483
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(463,466,479,483)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          491..511
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          519..539
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          701..812
                     /region_name="SCAN"
                     /note="leucine rich region; smart00431"
                     /db_xref="CDD:128708"
     Region          <937..1114
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          940..960
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          968..988
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(968,971,984,988)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          998..1015
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1023..1043
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1051..1071
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1056,1058,1060,1062..1063,1066..1067,1070,1084,1086,
                     1090..1091,1094..1095,1098,1112,1114,1116,1118..1119,
                     1122..1123,1126)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          1079..1099
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1079,1082,1095,1099)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          1107..1127
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1107..1127
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     CDS             1..1134
                     /gene="ZKSCAN1"
                     /coded_by="XM_061152366.1:235..3639"
                     /db_xref="GeneID:133063247"
ORIGIN      
        1 mmtaesreat glspqaaqek dgivivkvee edeeehmwgq daslqesppp dpeifrqrfr
       61 hfcyqntfgp realsrlkel chqwlrpeih tkeqilellv leqflsilpr elqawlqeyr
      121 pdsgeeavtl ledleldlsg qqvpgqvhgp emlargmvpl dpvqesssfd lpheptqshf
      181 khssrkprll qpralpathv paphpegapr dqamasalfs adsqamvkie dmavslilee
      241 wgcqnlarrn lnrdarqeny gnvisqgcen rdeteestsk aesaedsasr getagkfqkd
      301 vgekreqqgr vverqqrnpe ekagkekrds gpatvkekkp sagergprek gkglgrsfsl
      361 ssnfttteev ptgtkshrcd ecgkcftrss slirhkiiht gekpyecsec gkafslnsnl
      421 vlhqrihtge kphecnecgk afshssnlil hqrihsgekp yecnecgkaf sqssdltkhq
      481 rihtgekpye csecgkafnr nsylilhrri htrekpykct kcgkaftrss tltlhhriht
      541 reraseyspa sldafgaflk scvaqfeifr qelklirhlf vnqqpklgrd hrrtrdtemq
      601 krppeflegl lrplaalrgr sydvlpaapa arvalknqkp tgtnipaprn pvcsdscfws
      661 asemkvlgma tvlgprppqe qgpvivkiee eeekgkrlpm eifrqrfrqf gyhdtpgpre
      721 alsqlrvlcc ewlrpeihtk eqilellvle qfltilpqel qawvqehcpe saeeavtlle
      781 dlereldepa pqaspppreq krswekmsps gtaeeslssp qlesvetshr yeswgplyiq
      841 etgeeekftp alrkvrdrks ktqneestdk egsseeshae gfrrdtlpmi iadkcearle
      901 rqwvnpeker gtktplqdkg sakgrevvtk papgerryic aecgkafsns snltkhrrth
      961 tgekpyvctk cgkafshssn ltlhyrthlv drpydckcgk afgqssdllk hqrmhteeap
     1021 yqckdcgkaf sgkgslirhy rihtgekpyq cnecgksfsq haglsshqrl htgekpykck
     1081 ecgkafnhss nfnkhhriht gekpywcsdc gktfcsksnl skhqkvhtae gegs
//
LOCUS       XP_061008350             288 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 2AE1 [Dama dama].
ACCESSION   XP_061008350
VERSION     XP_061008350.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152367.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 28% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..288
                     /product="olfactory receptor 2AE1"
                     /calculated_mol_wt=32150
     Region          1..270
                     /region_name="7tmA_OR2T-like"
                     /note="olfactory receptor subfamily 2T and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15421"
                     /db_xref="CDD:320543"
     Region          28..54
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320543"
     Site            order(50,53..54,66..71,73..74,77,122,124..128,164,
                     167..169,171..173,175..176,221,224..225,227..228,231,
                     237..238,240..242,245,248..249)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320543"
     Region          66..96
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320543"
     Region          109..130
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320543"
     Region          164..194
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320543"
     Region          201..231
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320543"
     Region          238..263
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320543"
     CDS             1..288
                     /gene="LOC133063248"
                     /coded_by="XM_061152367.1:3137..4003"
                     /db_xref="GeneID:133063248"
ORIGIN      
        1 mvvfliavsg ntltlllica dprlhtpmyl llsqlslmdl mhvsttipkm atnylsgqks
       61 isfvgcatqh flyltlggae clllafmsyd ryvaichplr ytvlmnrkvt lmmaamswlg
      121 aslnsliyta slmhfpfcgp rqihhfycef pavvklvcgd ipvyeatvyi stlfllllpi
      181 llisasyvfi lhsviqmraa gskrnafatc sshltvvslw fgacifsymr prsqrtplqd
      241 kvgsvfysii tptlnpliyt lrnkdvakal rrvlgrdlit qrsqvqls
//
LOCUS       XP_061008351             205 aa            linear   MAM 02-DEC-2023
DEFINITION  putative olfactory receptor 1F12P [Dama dama].
ACCESSION   XP_061008351
VERSION     XP_061008351.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152368.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..205
                     /product="putative olfactory receptor 1F12P"
                     /calculated_mol_wt=22250
     Region          <1..185
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          34..50
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320584"
     Region          87..110
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320584"
     Region          129..151
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320584"
     Region          160..185
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320584"
     CDS             1..205
                     /gene="LOC133063249"
                     /coded_by="XM_061152368.1:1..618"
                     /db_xref="GeneID:133063249"
ORIGIN      
        1 mdnflltama ydryvaicqp lhysttmslp acalmlgsaw lianlhsllh tllmarldfc
       61 asnvipyffc dlvpllqlsc sntlpnqlmi llaggpivli pflsilvsyi hivsavlrvp
      121 sargkqkafs tcgshlavvi lfygtitgvy lspspshsad kdslasvmym vvtptlnpfi
      181 yclrnkdmkg alwklvsvka alhgl
//
LOCUS       XP_061008352             237 aa            linear   MAM 02-DEC-2023
DEFINITION  salivary gland specific protein SAGSIN1 [Dama dama].
ACCESSION   XP_061008352
VERSION     XP_061008352.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152369.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 38% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..237
                     /product="salivary gland specific protein SAGSIN1"
                     /calculated_mol_wt=25765
     Region          106..166
                     /region_name="DUF4560"
                     /note="Domain of unknown function (DUF4560); pfam15118"
                     /db_xref="CDD:434473"
     CDS             1..237
                     /gene="LOC133063253"
                     /coded_by="XM_061152369.1:1..714"
                     /db_xref="GeneID:133063253"
ORIGIN      
        1 mrfspgarsr sragtrrrla ealpdrvtrr lpsprparpp arlpaspppp slpqrgpaag
       61 aevrgrrgae raggrasahp aarvqrpvga lraggrrrrr apvymaaals glavrlsrsa
      121 aarsygvfck gltrtlliff dlawrlrinf pylyivasmm lnvrlqnvgv ypgmwctvli
      181 htdlslpaar klvhvtvlsl slrsleskll edrscfvhlv hrphpcaqns tgvasal
//
LOCUS       XP_061008354             342 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 10AC1-like [Dama dama].
ACCESSION   XP_061008354
VERSION     XP_061008354.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152371.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..342
                     /product="olfactory receptor 10AC1-like"
                     /calculated_mol_wt=36402
     Region          61..324
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          81..103
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320353"
     Region          121..143
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320353"
     Region          166..182
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320353"
     Region          219..242
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320353"
     Region          261..283
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320353"
     Region          292..317
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320353"
     CDS             1..342
                     /gene="LOC133063254"
                     /coded_by="XM_061152371.1:1..1029"
                     /db_xref="GeneID:133063254"
ORIGIN      
        1 msqgeekapl llaqvptmsh wpesngsvpw efvilgfsgw ppelrvllfa lllplylaml
       61 tgnllivgla vvdtalhtpm yfflgalsav evaytlvltp pmlagfllpp ggqavgpstc
      121 aaqmglfval ggseclllaa maldrylaic hplyypqlmt tglcwclltc cglggsllal
      181 glttaifqlp fchgglvnhv fcdlpavlvl acgdrdlqer vllaacllll vlplalills
      241 ytrvlavilg msgaagrrka fstvashltv avlhygcata myarplcsrs leedklvsli
      301 yinltpllyp aiytlrnrdv qgalwravgp rtpgathqad vt
//
LOCUS       XP_061008355             542 aa            linear   MAM 02-DEC-2023
DEFINITION  nascent polypeptide-associated complex subunit alpha,
            muscle-specific form-like [Dama dama].
ACCESSION   XP_061008355
VERSION     XP_061008355.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152372.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..542
                     /product="nascent polypeptide-associated complex subunit
                     alpha, muscle-specific form-like"
                     /calculated_mol_wt=56921
     Region          <34..395
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..542
                     /gene="LOC133063255"
                     /coded_by="XM_061152372.1:1..1629"
                     /db_xref="GeneID:133063255"
ORIGIN      
        1 mviasaltpg htpntgfrtl tcahrvawsp lhrqaccphs ppqspslrts flkpepaess
       61 qgssaeectr spgssplers dsvlpvrgrg aqswlgspsd pseaptkptt gafpmglpgq
      121 vrssgshttr appesryppq kcptrapgdp lsagltptdt rltssaaprh psprgpperq
      181 argtprfwgl dsegrrgrwp qvtswnprar ppsppaaglr dpppetapgp prascfhdnr
      241 rslawaaqet pragpaapar aprpgaspps qpprpgvpda terplpplla hpspptqpaa
      301 aaaafprgsh prrwpepvsr trawrdascr ppngrgrafg ggarwagprg grggrredgs
      361 assscgqpet rsgpregagp prdeplaqwt rpdssrshga npgthrspsr nglsghrrdg
      421 rlpsdhhher trrfkspsrg qgspagrqpg lqqqalllas vvtiasglte qvvngrpaqr
      481 rgmpggapqp pllpssptft papplalpwk cppnsgavae vpecptghsa anpslprllg
      541 tq
//
LOCUS       XP_061008356             939 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: kinesin-like protein KIF19 [Dama dama].
ACCESSION   XP_061008356
VERSION     XP_061008356.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152373.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 35% of CDS bases
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..939
                     /product="LOW QUALITY PROTEIN: kinesin-like protein KIF19"
                     /calculated_mol_wt=103888
     Region          10..347
                     /region_name="KISc_KIP3_like"
                     /note="Kinesin motor domain, KIP3-like subgroup; cd01370"
                     /db_xref="CDD:276821"
     Site            order(18,103,106,108..111,249)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276821"
     Site            order(300,303,306)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276821"
     Region          342..>610
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          661..>905
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..939
                     /gene="LOC133063256"
                     /coded_by="XM_061152373.1:1..2820"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /db_xref="GeneID:133063256"
ORIGIN      
        1 mremepkdqq lmvalrirpl ndteleegaa viahkvgdqm vvlmdpsedp edplrthrsr
       61 ektfifdvvf dqhasqedvy lattqqlveg vvsgynatvf aygpsgagkt htmlgmdtep
      121 giylqmlsdl fqaieetrdn tdcsvsmsyl eiynevirdl lspssgfldl redsrgsiqi
      181 agitevstsn aqeimqlltk gnrqrtqept atnktssrsh avlqvtvrrr grgahlaeev
      241 rvgrlfmvdl agserasqtq nqgkrmkega hinrsllalg ncinalsekg gsraqyvnfr
      301 dskltrllkd alggnsrtvm iahispasth feesrttlly ayrakniktr vkrnllsvsy
      361 hiaqytdvis dlrgqiqrlk akverqerer rggpsgrdaq dlexemaths sedsrlqmnr
      421 iraqligafk eqlemrrslv elentnielh vdtsrhllti adwerekthh vtrrvgtpek
      481 deevleagpe gdegqpaeph evalareevn mllaeqrkta alkagleqrl anakkkasem
      541 eellpsqavs edqrevlrll craheleven aelqarrlrg gsllcqkdll iqrcqqhrll
      601 ceriireqrr lirdsglvvp ealeqryrlf srelgagtln rllllhavma sslrdgsvln
      661 ispppeepsr dqlddredlp wgaqfelppm lldpdsdgyk sskatpskkl dkkdsllphs
      721 slhillspva hevgvcgang pkalkpssqs mktlvsklcs pagrepgtpt prtaaeagls
      781 aqalkemavg tksialiaat rrsraqdreg gsgrsslhpa eevapdpkdp kpsvtpettl
      841 anrkwpqasp gralsaerka rgkpsplltr svqlsspgps rapllprdir dvvghhamay
      901 tihpltsgav tsvhdylqhd ssltpphlnc cdsvnvylt
//
LOCUS       XP_061008357             633 aa            linear   MAM 02-DEC-2023
DEFINITION  collagen alpha-1(I) chain-like [Dama dama].
ACCESSION   XP_061008357
VERSION     XP_061008357.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152374.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..633
                     /product="collagen alpha-1(I) chain-like"
                     /calculated_mol_wt=65869
     Region          <12..486
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..633
                     /gene="LOC133063257"
                     /coded_by="XM_061152374.1:1..1902"
                     /db_xref="GeneID:133063257"
ORIGIN      
        1 mprgwvgaga eaklpqeplv qlltapapat pqlapqtsag gtvltrrdrt gpgpdcpvfp
       61 pphhhpswsv stagfwslrp essgpgrggv hllcvlpqgp vgsrpwpcgl ppsvsrnrdf
      121 lrpprsrqrs pnascqpaqa vgkphvkraf lghdpegaeq nfkascgeas prtppgkpsr
      181 apgwmrqrtg awarltaapw sevssscdsg prgepssgyc akrkvgrphv papsapcpss
      241 rapalvhqpl kadpgpggpt ssgreslsql pgygampqng aggvpgvsgc papcplgpqq
      301 etqgtpspqp lakasvghrl ssgapappem giqewgsper rwsccelrdm pragpnpwat
      361 aahdqppqrw lpypqsrsnl panveqswhh lwkvpsgqga pslgpsglqd qgteqreplp
      421 slrlpssgrv ggghekapgl lpafqprppp pasvvdrwrw cpgagggsal adplplaprt
      481 grsaprpvpl aacqlpgtpv eccsahlmeg etevpgagie pvadgadtgl ltleatsdha
      541 rlrrcraltg hthgtyyvpe qsscwrlskt ggsshrqdvg satcqdgklg erppapgpta
      601 tqsvvaaacs shptrrpfpp apscqppggt cre
//
LOCUS       XP_061008358             326 aa            linear   MAM 02-DEC-2023
DEFINITION  basic salivary proline-rich protein 3-like [Dama dama].
ACCESSION   XP_061008358
VERSION     XP_061008358.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152375.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..326
                     /product="basic salivary proline-rich protein 3-like"
                     /calculated_mol_wt=33226
     CDS             1..326
                     /gene="LOC133063260"
                     /coded_by="XM_061152375.1:1..981"
                     /db_xref="GeneID:133063260"
ORIGIN      
        1 mavaaggmld gavgadlkle rrqealqqaa ppggpdippc grsilvlpvp qladpggsvq
       61 pqthrpalel lgelgrrslt srlcpgrpda ppdlggghsp iagprrlpga rdppeagaac
      121 sarplrpppg sprslgtprg ggalsvagpg lqsiagrgrg eekgdsgvgp gsrdassanl
      181 raltrgaapr rsdicppaga pggerlgreg aahgerplhl prtspaapra lppsaplpps
      241 prsqrpralv phqvltwgpk rararerral pwepplrlar rppsaaheav etapslgsdc
      301 aarlpppppg rrawagmgls vrslra
//
LOCUS       XP_061008359            1091 aa            linear   MAM 02-DEC-2023
DEFINITION  patched domain-containing protein 3-like [Dama dama].
ACCESSION   XP_061008359
VERSION     XP_061008359.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152376.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 23% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1091
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1091
                     /product="patched domain-containing protein 3-like"
                     /calculated_mol_wt=120768
     Region          310..1091
                     /region_name="Patched"
                     /note="Patched family; pfam02460"
                     /db_xref="CDD:308203"
     CDS             1..1091
                     /gene="LOC133063261"
                     /coded_by="XM_061152376.1:1..3276"
                     /db_xref="GeneID:133063261"
ORIGIN      
        1 mgdtaspppp prtpvrphhr tpssplnhrg pyprprprhp sppttkgrgk glrreawrqv
       61 grghdrgera repdktaagg vgsggweqaa rlggrgeapg deqratrrsr hsvqgqrrea
      121 tgrhadpqrg aatrqaaqpa rrhrrirtvr saaggkavva gatgkgawga emslnpskva
      181 pepepereae qepgseaqgp gperesgppa gpgpepepps aagpsaeppp gpeappplpa
      241 sqsenlrapr prchtnclea plsrafrrlg rkvgahhwif lllpmaltav lgtglmylpr
      301 dgeedleeey tpigspakae rrfvqghfta ndslvfsisr ksaevpyasi lvvsnaetll
      361 epdileeisk vddtvqaltv tqdngtqipy revcaknqgs cvppnpllfa wkrnkglnlr
      421 titfpiysla gqivslanil ggtvlgesmg psqlllqaka mrlqyyletg geenerskaw
      481 mihfltkass leeslalkki qvvyfsslsr qlefeatsmt viplfhlayl liilfaivsc
      541 yrcdcvqnkm wvavfgvisv alavvsgfgl mlyigvpfvl ivanspflil gvgvddmfim
      601 isawqktslm dnisermsdv yskvavsiti ttvtnvlafy tgimtsfrsv qyfciytgtt
      661 llfcyfynit cfgafmaldg krevvclrwl kkpetpdqkc sslkkscclp cnslqdeyka
      721 dihpmnlffr dyfgpflist kskifvvlly vsyiiasvyg cfhvqegldl rnlasddsyi
      781 tpyfnveedh fstygprvmv ivteaidywd kdarkklenc ladfenseyv denltefwlq
      841 eyikymenlr qdindktsfl sniptflmdf plfaydinit ssqeiicsra fvqtigisss
      901 tnkklmllqf rnmaekcevp lmvynpafiy fdqysaiven tvrnvvvasa amfivsllli
      961 phplcslwvt faiasvivgv tgfmafwnvn ldsisminlv icigfsfdfs ahisyafvss
     1021 sepsvdrkai ealyllgypv lqsavstiig vcvlsaanay ifrtffkimf lvmifgaahg
     1081 lvfipvfltf f
//
LOCUS       XP_061008361             363 aa            linear   MAM 02-DEC-2023
DEFINITION  cyclin-Y-like protein 1 [Dama dama].
ACCESSION   XP_061008361
VERSION     XP_061008361.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152378.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..363
                     /product="cyclin-Y-like protein 1"
                     /calculated_mol_wt=40806
     Region          188..284
                     /region_name="CYCLIN_CCNY_like"
                     /note="cyclin box found in cyclin-Y (CCNY) family;
                     cd20540"
                     /db_xref="CDD:410243"
     CDS             1..363
                     /gene="LOC133063263"
                     /coded_by="XM_061152378.1:156..1247"
                     /db_xref="GeneID:133063263"
ORIGIN      
        1 mgntltccvc psaspklgrr agpaepdyes evyeaaagda vavapapaav eptevdfrag
       61 egrhlqhisd rempedlale snpsdhpras tiflsksqtd vrekrksnhl nhvssgqltk
      121 kysscptvfl ddstvsqpnl rttikcvila iyyhiknrda nrsldifder shpltrervp
      181 eeyfqhdpeh kfiyrfvhtl fsaaqltaec avvtlvyler lltyaeidvc ptnwkrivlg
      241 avlhaskvwd dqavwnvdcc qivkdmtved mnemerhfle llqfninvpa svyakyhfdl
      301 csladdnnls fliaplsker aqsleaisrl cedkykdlgr vavrrsfsad nfigiqrsna
      361 ils
//
LOCUS       XP_061008362             363 aa            linear   MAM 02-DEC-2023
DEFINITION  cyclin-Y-like protein 1 [Dama dama].
ACCESSION   XP_061008362
VERSION     XP_061008362.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152379.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..363
                     /product="cyclin-Y-like protein 1"
                     /calculated_mol_wt=40867
     Region          188..284
                     /region_name="CYCLIN_CCNY_like"
                     /note="cyclin box found in cyclin-Y (CCNY) family;
                     cd20540"
                     /db_xref="CDD:410243"
     CDS             1..363
                     /gene="LOC133063264"
                     /coded_by="XM_061152379.1:156..1247"
                     /db_xref="GeneID:133063264"
ORIGIN      
        1 mgntltccvc psaspklgrr agpaepdyes evyeaaagda vavapapaav eptevdfrag
       61 egrhlqhisd rempedlale snpsdhpras tiflsksqtd vrekrksnhl nhvssgqltk
      121 kysscptvfl ddstvsqpnl rttikcvila iyyhiknrda nrsldifder shpltrervp
      181 eeyfqhdpeh kfiyrfvhtl fsaaqltaec avvtlvyler lltyaeidic ptnwkrivlg
      241 aillaskvwd dqavwnvdys qilkdmtved mnemerhfle llqfninvpa svyakyhfnl
      301 csladdnnls fliaplsker aqsleaisrl cedkykdlgr vavrrsfsad nfigiqrsna
      361 ils
//
LOCUS       XP_061008363             433 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-9 receptor isoform X1 [Dama dama].
ACCESSION   XP_061008363
VERSION     XP_061008363.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152380.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..433
                     /product="interleukin-9 receptor isoform X1"
                     /calculated_mol_wt=46497
     Region          144..250
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(241..242,244..245)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     CDS             1..433
                     /gene="IL9R"
                     /coded_by="XM_061152380.1:50..1351"
                     /db_xref="GeneID:133063265"
ORIGIN      
        1 mgagsciwrg wtlqsevlmr eagicfllca wlglgvpvlg drggpgpgaf tcynnnilri
       61 ecrwpgpapg qgagswllft snlalgsehk cvfwagvctv elppeevlvp adnftitfhr
      121 hvsgkeqvsl vdpqylprrh vkldppldlq snvssehcvl twsispalep latllsyela
      181 fkrqeeawew arhkdhivgv twlkleaael dpgsayearl rvqmatlege vaeeegydgv
      241 wsdwsqpacf aapsrrgrlv palgqadstl vavsifllls sltyllfkls prmktalyqd
      301 vpspgpffqp lysvhngdfq twigacgagp eagrdhvgpp rgallearvr eavallhcdp
      361 adawpsagle eeggpgpglp agvlpaghve qaapspaylp qedrasaghp wlappqcegi
      421 sgdycaldcs ags
//
LOCUS       XP_061008364             399 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-9 receptor isoform X2 [Dama dama].
ACCESSION   XP_061008364
VERSION     XP_061008364.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152381.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..399
                     /product="interleukin-9 receptor isoform X2"
                     /calculated_mol_wt=42854
     Region          110..216
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(207..208,210..211)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     CDS             1..399
                     /gene="IL9R"
                     /coded_by="XM_061152381.1:45..1244"
                     /db_xref="GeneID:133063265"
ORIGIN      
        1 mgagsciwrg pgpgaftcyn nnilriecrw pgpapgqgag swllftsnla lgsehkcvfw
       61 agvctvelpp eevlvpadnf titfhrhvsg keqvslvdpq ylprrhvkld ppldlqsnvs
      121 sehcvltwsi spaleplatl lsyelafkrq eeawewarhk dhivgvtwlk leaaeldpgs
      181 ayearlrvqm atlegevaee egydgvwsdw sqpacfaaps rrgrlvpalg qadstlvavs
      241 iflllsslty llfklsprmk talyqdvpsp gpffqplysv hngdfqtwig acgagpeagr
      301 dhvgpprgal learvreava llhcdpadaw psagleeegg pgpglpagvl paghveqaap
      361 spaylpqedr asaghpwlap pqcegisgdy caldcsags
//
LOCUS       XP_061008365             108 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA-directed RNA polymerase III subunit RPC10 [Dama dama].
ACCESSION   XP_061008365
VERSION     XP_061008365.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152382.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..108
                     /product="DNA-directed RNA polymerase III subunit RPC10"
                     /calculated_mol_wt=12185
     Region          4..107
                     /region_name="RPB9"
                     /note="DNA-directed RNA polymerase, subunit
                     M/Transcription elongation factor TFIIS [Transcription];
                     COG1594"
                     /db_xref="CDD:441202"
     Region          61..108
                     /region_name="Zn-ribbon_RPC11"
                     /note="C-terminal zinc ribbon domain of RPC11 subunit of
                     RNA polymerase III; cd10509"
                     /db_xref="CDD:259794"
     Site            order(69,72,97,102)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:259794"
     CDS             1..108
                     /gene="POLR3K"
                     /coded_by="XM_061152382.1:48..374"
                     /db_xref="GeneID:133063266"
ORIGIN      
        1 mllfcpgcgn gliveegqrc hrfacntcpy vhnvtrkvtn rkypklkevd dvlggaaawe
       61 nvdstaepcp kcehprayfm qlqtrsadep mttfykccna qcghrwrd
//
LOCUS       XP_061008366             856 aa            linear   MAM 02-DEC-2023
DEFINITION  inactive rhomboid protein 1 [Dama dama].
ACCESSION   XP_061008366
VERSION     XP_061008366.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152383.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..856
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..856
                     /product="inactive rhomboid protein 1"
                     /calculated_mol_wt=97224
     Region          91..285
                     /region_name="Rhomboid_SP"
                     /note="Rhomboid serine protease; pfam12595"
                     /db_xref="CDD:463639"
     Region          648..791
                     /region_name="Rhomboid"
                     /note="Rhomboid family; pfam01694"
                     /db_xref="CDD:426384"
     CDS             1..856
                     /gene="RHBDF1"
                     /coded_by="XM_061152383.1:109..2679"
                     /db_xref="GeneID:133063267"
ORIGIN      
        1 mgearrdsss slqhkkppwl kldipavvpp aaeepsflqp lrrqaflrsv smpaeparvp
       61 sphqeprrpa lqrqmsitqt irrgtadwfg vskdsdstqk wqrksirhcs qrygklkpqv
      121 ireldlpsqd nvsltstetp pplyvgpcql gmqkiidpla rgrafrladd aadgpsapht
      181 pvtpgaaslc sfsssrsgfn rlprrrkres vakmsfraaa alvkgrsvrd gtlrraqrrs
      241 ftpasfleed tadfpdeldt sffaregvlh eelstypdev fespseaalk dwerapeqvd
      301 ltggaldrse lershlmlpl ergwrkqkeg gaaapqpkvr lrqevvstag qrrgqriamp
      361 vrklfarekr pyglgmvgrl tnrtyrkrid syvkrqiedm ddhrpfftyw ltfvhslvti
      421 lavciygvap vgfsqhetvd svlrnrgvye nvkyvqqenf wigpsseali hlgakfspcm
      481 rqdpqvhsfi haarerekhs accvrndrsg cvqtseeecs stlavwvkwp lhptapdlag
      541 qkrrygsvch qdprvcdeps sedphewpdd itkwpictkn sagnhtnhlh mdcvitgrpc
      601 cigtkgrcei tsreycdfmr gyfheeatlc sqvhcmddvc gllpflnpev pdqfyrlwls
      661 lflhagvlhc lvsvcfqmtv lrdleklagw hriaiiylls gvtgnlasai flpyraevgp
      721 agsqfgilac lfvelfqswq ilarpwraff kllavvlflf tfgllpwidn fahisgfisg
      781 lflsfaflpy isfgrfdlyr krcqiivfql vflgllaglv vlfyfypirc ewcefltcip
      841 ftdkfcekye ldaqlh
//
LOCUS       XP_061008368             634 aa            linear   MAM 02-DEC-2023
DEFINITION  GATOR1 complex protein NPRL3 isoform X1 [Dama dama].
ACCESSION   XP_061008368
VERSION     XP_061008368.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152385.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..634
                     /product="GATOR1 complex protein NPRL3 isoform X1"
                     /calculated_mol_wt=70258
     Region          64..440
                     /region_name="NPR3"
                     /note="Nitrogen Permease regulator of amino acid transport
                     activity 3; cl24021"
                     /db_xref="CDD:451662"
     CDS             1..634
                     /gene="NPRL3"
                     /coded_by="XM_061152385.1:354..2258"
                     /db_xref="GeneID:133063268"
ORIGIN      
        1 mgdntspisv ilvssgsrgn kllfrypfqr sqehpasqts kprsryavns tgehaedqdg
       61 dprfsdvila tilatksemc gqkfelkidn vrfvghptll qhtlgqvskt dpspkreapt
      121 milfnvvfal rahadpsvis clhtlsrria tvlqheerrc qyltreakli lalqdevsam
      181 adandgpqsp fhhilpkckl ardlkdaydr revlsvslpv agravstasc efwlrnsidr
      241 gqeglllsra qdrwelgaar ragaraglgl pqlrslctsg vvrlhvnswl evsfclphki
      301 hyaasslipp eaierslkai rpyhalllls deksllselp vdcspalvrv ikttsavknl
      361 qqlaqdadla llqvfqlaah lvywgkaivi yplcennvym lspnasvcly splaeqfsrq
      421 fpshdlpsvl akfslpvsls efrnplappv qetqlvqmvv wllqrrllvq lhtyvclmaa
      481 psedeprpre ddaplaarvg grslstpnal sfgsptssdd mtltspsmdn ssaellpsgd
      541 splnrrmtes llaslseher aailsvpaaq npedlrmfar llhyfrgrhh leeimynent
      601 rrsqllalvd kfrsvlvvtt hedpviavfq allt
//
LOCUS       XP_061008369             556 aa            linear   MAM 02-DEC-2023
DEFINITION  GATOR1 complex protein NPRL3 isoform X2 [Dama dama].
ACCESSION   XP_061008369
VERSION     XP_061008369.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152386.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..556
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..556
                     /product="GATOR1 complex protein NPRL3 isoform X2"
                     /calculated_mol_wt=61724
     Region          1..362
                     /region_name="NPR3"
                     /note="Nitrogen Permease regulator of amino acid transport
                     activity 3; cl24021"
                     /db_xref="CDD:451662"
     CDS             1..556
                     /gene="NPRL3"
                     /coded_by="XM_061152386.1:67..1737"
                     /db_xref="GeneID:133063268"
ORIGIN      
        1 mcgqkfelki dnvrfvghpt llqhtlgqvs ktdpspkrea ptmilfnvvf alrahadpsv
       61 isclhtlsrr iatvlqheer rcqyltreak lilalqdevs amadandgpq spfhhilpkc
      121 klardlkday drrevlsvsl pvagravsta scefwlrnsi drgqegllls raqdrwelga
      181 arragaragl glpqlrslct sgvvrlhvns wlevsfclph kihyaassli ppeaierslk
      241 airpyhalll lsdeksllse lpvdcspalv rvikttsavk nlqqlaqdad lallqvfqla
      301 ahlvywgkai viyplcennv ymlspnasvc lysplaeqfs rqfpshdlps vlakfslpvs
      361 lsefrnplap pvqetqlvqm vvwllqrrll vqlhtyvclm aapsedeprp reddaplaar
      421 vggrslstpn alsfgsptss ddmtltspsm dnssaellps gdsplnrrmt esllaslseh
      481 eraailsvpa aqnpedlrmf arllhyfrgr hhleeimyne ntrrsqllal vdkfrsvlvv
      541 tthedpviav fqallt
//
LOCUS       XP_061008370             569 aa            linear   MAM 02-DEC-2023
DEFINITION  GATOR1 complex protein NPRL3 isoform X3 [Dama dama].
ACCESSION   XP_061008370
VERSION     XP_061008370.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152387.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..569
                     /product="GATOR1 complex protein NPRL3 isoform X3"
                     /calculated_mol_wt=63174
     Region          64..375
                     /region_name="NPR3"
                     /note="Nitrogen Permease regulator of amino acid transport
                     activity 3; cl24021"
                     /db_xref="CDD:451662"
     CDS             1..569
                     /gene="NPRL3"
                     /coded_by="XM_061152387.1:352..2061"
                     /db_xref="GeneID:133063268"
ORIGIN      
        1 mgdntspisv ilvssgsrgn kllfrypfqr sqehpasqts kprsryavns tgehaedqdg
       61 dprfsdvila tilatksemc gqkfelkidn vrfvghptll qhtlgqvskt dpspkreapt
      121 milfnvvfal rahadpsvis clhtlsrria tvlqheerrc qyltreakli lalqdevsam
      181 adandgpqsp fhhilpkckl ardlkdayds lctsgvvrlh vnswlevsfc lphkihyaas
      241 slippeaier slkairpyha llllsdeksl lselpvdcsp alvrviktts avknlqqlaq
      301 dadlallqvf qlaahlvywg kaiviyplce nnvymlspna svclysplae qfsrqfpshd
      361 lpsvlakfsl pvslsefrnp lappvqetql vqmvvwllqr rllvqlhtyv clmaapsede
      421 prpreddapl aarvggrsls tpnalsfgsp tssddmtlts psmdnssael lpsgdsplnr
      481 rmtesllasl seheraails vpaaqnpedl rmfarllhyf rgrhhleeim ynentrrsql
      541 lalvdkfrsv lvvtthedpv iavfqallt
//
LOCUS       XP_061008371             556 aa            linear   MAM 02-DEC-2023
DEFINITION  GATOR1 complex protein NPRL3 isoform X2 [Dama dama].
ACCESSION   XP_061008371
VERSION     XP_061008371.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152388.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..556
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..556
                     /product="GATOR1 complex protein NPRL3 isoform X2"
                     /calculated_mol_wt=61724
     Region          1..362
                     /region_name="NPR3"
                     /note="Nitrogen Permease regulator of amino acid transport
                     activity 3; cl24021"
                     /db_xref="CDD:451662"
     CDS             1..556
                     /gene="NPRL3"
                     /coded_by="XM_061152388.1:179..1849"
                     /db_xref="GeneID:133063268"
ORIGIN      
        1 mcgqkfelki dnvrfvghpt llqhtlgqvs ktdpspkrea ptmilfnvvf alrahadpsv
       61 isclhtlsrr iatvlqheer rcqyltreak lilalqdevs amadandgpq spfhhilpkc
      121 klardlkday drrevlsvsl pvagravsta scefwlrnsi drgqegllls raqdrwelga
      181 arragaragl glpqlrslct sgvvrlhvns wlevsfclph kihyaassli ppeaierslk
      241 airpyhalll lsdeksllse lpvdcspalv rvikttsavk nlqqlaqdad lallqvfqla
      301 ahlvywgkai viyplcennv ymlspnasvc lysplaeqfs rqfpshdlps vlakfslpvs
      361 lsefrnplap pvqetqlvqm vvwllqrrll vqlhtyvclm aapsedeprp reddaplaar
      421 vggrslstpn alsfgsptss ddmtltspsm dnssaellps gdsplnrrmt esllaslseh
      481 eraailsvpa aqnpedlrmf arllhyfrgr hhleeimyne ntrrsqllal vdkfrsvlvv
      541 tthedpviav fqallt
//
LOCUS       XP_061008372             530 aa            linear   MAM 02-DEC-2023
DEFINITION  GATOR1 complex protein NPRL3 isoform X4 [Dama dama].
ACCESSION   XP_061008372
VERSION     XP_061008372.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152389.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..530
                     /product="GATOR1 complex protein NPRL3 isoform X4"
                     /calculated_mol_wt=58663
     Region          <43..336
                     /region_name="NPR3"
                     /note="Nitrogen Permease regulator of amino acid transport
                     activity 3; cl24021"
                     /db_xref="CDD:451662"
     CDS             1..530
                     /gene="NPRL3"
                     /coded_by="XM_061152389.1:748..2340"
                     /db_xref="GeneID:133063268"
ORIGIN      
        1 mpvpphwgrh ravcaavraa apcppwnaha dpsvisclht lsrriatvlq heerrcqylt
       61 reaklilalq devsamadan dgpqspfhhi lpkcklardl kdaydrrevl svslpvagra
      121 vstascefwl rnsidrgqeg lllsraqdrw elgaarraga raglglpqlr slctsgvvrl
      181 hvnswlevsf clphkihyaa sslippeaie rslkairpyh allllsdeks llselpvdcs
      241 palvrviktt savknlqqla qdadlallqv fqlaahlvyw gkaiviyplc ennvymlspn
      301 asvclyspla eqfsrqfpsh dlpsvlakfs lpvslsefrn plappvqetq lvqmvvwllq
      361 rrllvqlhty vclmaapsed eprpreddap laarvggrsl stpnalsfgs ptssddmtlt
      421 spsmdnssae llpsgdspln rrmtesllas lseheraail svpaaqnped lrmfarllhy
      481 frgrhhleei mynentrrsq llalvdkfrs vlvvtthedp viavfqallt
//
LOCUS       XP_061008373             514 aa            linear   MAM 02-DEC-2023
DEFINITION  GATOR1 complex protein NPRL3 isoform X5 [Dama dama].
ACCESSION   XP_061008373
VERSION     XP_061008373.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152390.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..514
                     /product="GATOR1 complex protein NPRL3 isoform X5"
                     /calculated_mol_wt=57037
     Region          <1..320
                     /region_name="NPR3"
                     /note="Nitrogen Permease regulator of amino acid transport
                     activity 3; cl24021"
                     /db_xref="CDD:451662"
     CDS             1..514
                     /gene="NPRL3"
                     /coded_by="XM_061152390.1:158..1702"
                     /db_xref="GeneID:133063268"
ORIGIN      
        1 milfnvvfal rahadpsvis clhtlsrria tvlqheerrc qyltreakli lalqdevsam
       61 adandgpqsp fhhilpkckl ardlkdaydr revlsvslpv agravstasc efwlrnsidr
      121 gqeglllsra qdrwelgaar ragaraglgl pqlrslctsg vvrlhvnswl evsfclphki
      181 hyaasslipp eaierslkai rpyhalllls deksllselp vdcspalvrv ikttsavknl
      241 qqlaqdadla llqvfqlaah lvywgkaivi yplcennvym lspnasvcly splaeqfsrq
      301 fpshdlpsvl akfslpvsls efrnplappv qetqlvqmvv wllqrrllvq lhtyvclmaa
      361 psedeprpre ddaplaarvg grslstpnal sfgsptssdd mtltspsmdn ssaellpsgd
      421 splnrrmtes llaslseher aailsvpaaq npedlrmfar llhyfrgrhh leeimynent
      481 rrsqllalvd kfrsvlvvtt hedpviavfq allt
//
LOCUS       XP_061008374             295 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA-3-methyladenine glycosylase [Dama dama].
ACCESSION   XP_061008374
VERSION     XP_061008374.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152391.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..295
                     /product="DNA-3-methyladenine glycosylase"
                     /calculated_mol_wt=32374
     Region          71..267
                     /region_name="AAG"
                     /note="Alkyladenine DNA glycosylase catalyzes the first
                     step in base excision repair; cd00540"
                     /db_xref="CDD:187726"
     Site            order(106,108,117,138,143,150,161,163,243)
                     /site_type="active"
                     /db_xref="CDD:187726"
     Site            order(108,115,117,122,125,127,140,143,146,150,161,163,174,
                     198..201,210,243..244)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:187726"
     CDS             1..295
                     /gene="MPG"
                     /coded_by="XM_061152391.1:101..988"
                     /db_xref="GeneID:133063269"
ORIGIN      
        1 mptrrgaqls ctmrqkkqrl learrhqsps dgtqkpspke lhlgppatlg ptrsiyfssp
       61 eghparlgsa ffdqpavsla raflgqilvr rlddgtelrg riveteaylg pedeaahsrg
      121 grqtprncsm fmkpgtlyvy liygmyfcmn vssrgdgacv llraleplgg leamrqlrht
      181 lrkgtagral kdrelcngps klcqalaidr sfdqrdlard esvwleqgpp tpsepavvva
      241 arvgigqage waqkplrfyv rgspwvsvvd raaerdtqag atacshkdfn clqtk
//
LOCUS       XP_061008375             154 aa            linear   MAM 02-DEC-2023
DEFINITION  hemoglobin subunit theta-1-like isoform X1 [Dama dama].
ACCESSION   XP_061008375
VERSION     XP_061008375.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152392.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..154
                     /product="hemoglobin subunit theta-1-like isoform X1"
                     /calculated_mol_wt=16684
     Region          3..138
                     /region_name="Hb-alpha-like"
                     /note="Hemoglobin alpha, zeta, mu, theta, and related Hb
                     subunits; cd08927"
                     /db_xref="CDD:381263"
     Site            order(32,35..36,42..43,93,95..96,104,108,111..112,
                     118..120,123..124,127)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:381263"
     Site            order(33,43..44,59,62..63,66,84,88,98..99,102,137)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:381263"
     CDS             1..154
                     /gene="LOC133063270"
                     /coded_by="XM_061152392.1:226..690"
                     /db_xref="GeneID:133063270"
ORIGIN      
        1 mvlapadraa vlalwrklgt nvgiytteal erifvafpss ktyflhlnls pgsaqvrahg
       61 qkvaealsla mnhlddlpht lsalrelhah klrvdpvffk qlchcllvtl arhypgdfsp
      121 nmhaslvkfl nhvisalaps sgqigrvdae gscv
//
LOCUS       XP_061008376             153 aa            linear   MAM 02-DEC-2023
DEFINITION  hemoglobin subunit theta-1-like isoform X2 [Dama dama].
ACCESSION   XP_061008376
VERSION     XP_061008376.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152393.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..153
                     /product="hemoglobin subunit theta-1-like isoform X2"
                     /calculated_mol_wt=16556
     Region          3..137
                     /region_name="Globin-like"
                     /note="Globin-like protein superfamily; cl21461"
                     /db_xref="CDD:473869"
     Site            order(33,59,62..63,66,84,87..88,99,101)
                     /site_type="other"
                     /note="cofactor binding site [chemical binding]"
                     /db_xref="CDD:381255"
     CDS             1..153
                     /gene="LOC133063270"
                     /coded_by="XM_061152393.1:237..698"
                     /db_xref="GeneID:133063270"
ORIGIN      
        1 mvlapadraa vlalwrklgt nvgiytteal erifvafpss ktyflhlnls pgsaqvrahg
       61 qkvaealsla mnhlddlpht lsalrelhah klrvdpvffk lchcllvtla rhypgdfspn
      121 mhaslvkfln hvisalapss gqigrvdaeg scv
//
LOCUS       XP_061008378             141 aa            linear   MAM 02-DEC-2023
DEFINITION  hemoglobin subunit mu [Dama dama].
ACCESSION   XP_061008378
VERSION     XP_061008378.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152395.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..141
                     /product="hemoglobin subunit mu"
                     /calculated_mol_wt=15909
     Region          2..141
                     /region_name="Hb-alpha-like"
                     /note="Hemoglobin alpha, zeta, mu, theta, and related Hb
                     subunits; cd08927"
                     /db_xref="CDD:381263"
     Site            order(31,34..35,41..42,92,94..95,103,107,110..111,
                     117..119,122..123,126,140..141)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:381263"
     Site            order(32,42..43,58,61..62,65,83,87,97..98,101,136)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:381263"
     CDS             1..141
                     /gene="HBM"
                     /coded_by="XM_061152395.1:10..435"
                     /db_xref="GeneID:133063271"
ORIGIN      
        1 mlsaqerahi aqvwdliagh ealfgaellr rlftvypstk vyfrhlgdhp devqllnhgq
       61 rmlqavgvav qymdnlravl spladlhaqv lrvdptnfpl viqcfqvvla shlqdeftve
      121 mqaawdkflt gmavvlteky r
//
LOCUS       XP_061008379             371 aa            linear   MAM 02-DEC-2023
DEFINITION  putative RNA-binding protein Luc7-like 1 isoform X1 [Dama dama].
ACCESSION   XP_061008379
VERSION     XP_061008379.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152396.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..371
                     /product="putative RNA-binding protein Luc7-like 1 isoform
                     X1"
                     /calculated_mol_wt=43588
     Region          5..242
                     /region_name="LUC7"
                     /note="LUC7 N_terminus; pfam03194"
                     /db_xref="CDD:460842"
     CDS             1..371
                     /gene="LUC7L"
                     /coded_by="XM_061152396.1:142..1257"
                     /db_xref="GeneID:133063273"
ORIGIN      
        1 msaqaqmral ldqlmgtard gdetrqrvkf tddrvckshl ldccphdila gtrmdlgect
       61 kihdlalrad yeiaskerdl ffeldamdhl esfiaecdrr telakkrlae tqeeisaevs
      121 akaekvheln eeigkllaka eqlgaegnvd esqkilmeve kvrakkkeae eeyrnsmpas
      181 sfqqqklrvc evcsaylglh dndrrladhf ggklhlgfiq irekldqlrk tvaekqekrn
      241 qdrlrrreer ereerlsrrs gsrtrdrrrs rsrdrrrrrs rstsrerrks srsrsrdrhr
      301 rhrsrsrshs rghrrasrdr sskykfsrer tsreeswerg rsergatdwr lesangkaas
      361 rrseekeage i
//
LOCUS       XP_061008380             318 aa            linear   MAM 02-DEC-2023
DEFINITION  putative RNA-binding protein Luc7-like 1 isoform X2 [Dama dama].
ACCESSION   XP_061008380
VERSION     XP_061008380.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152397.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..318
                     /product="putative RNA-binding protein Luc7-like 1 isoform
                     X2"
                     /calculated_mol_wt=37630
     Region          <1..189
                     /region_name="LUC7"
                     /note="LUC7 N_terminus; pfam03194"
                     /db_xref="CDD:460842"
     CDS             1..318
                     /gene="LUC7L"
                     /coded_by="XM_061152397.1:377..1333"
                     /db_xref="GeneID:133063273"
ORIGIN      
        1 mdlgectkih dlalradyei askerdlffe ldamdhlesf iaecdrrtel akkrlaetqe
       61 eisaevsaka ekvhelneei gkllakaeql gaegnvdesq kilmevekvr akkkeaeeey
      121 rnsmpassfq qqklrvcevc saylglhdnd rrladhfggk lhlgfiqire kldqlrktva
      181 ekqekrnqdr lrrreerere erlsrrsgsr trdrrrsrsr drrrrrsrst srerrkssrs
      241 rsrdrhrrhr srsrshsrgh rrasrdrssk ykfsrertsr eeswergrse rgatdwrles
      301 angkaasrrs eekeagei
//
LOCUS       XP_061008381             552 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM234A isoform X1 [Dama dama].
ACCESSION   XP_061008381
VERSION     XP_061008381.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152398.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..552
                     /product="protein FAM234A isoform X1"
                     /calculated_mol_wt=58513
     Region          137..411
                     /region_name="PQQ_2"
                     /note="PQQ-like domain; pfam13360"
                     /db_xref="CDD:433144"
     CDS             1..552
                     /gene="FAM234A"
                     /coded_by="XM_061152398.1:109..1767"
                     /db_xref="GeneID:133063274"
ORIGIN      
        1 mtdgkdleae ihplksenrk vpentggpag keprgtpapq trlsrcrtaa fflslftcll
       61 vvfvvsfiip cpdrpasqgv wridynaava ydflatedvn kdkiqdilfl ykktnssrgn
      121 sslscadegf scpctfvaav sgangsilwe rpvaqdgafv ecgvlqprgs aapsacivlg
      181 rpgpliavdt ltgktlwsqp ssfggnasil spllrvpdld adgapdllvl vqeenqvngy
      241 iysggtgqqv sppdslgveg tsgsilhvtr agahyvlipc gtalcsrsvk glyekvsgrd
      301 sslksdplwe dmlsatshrl lvhssgairy lmnvpgkagd dlllvsaeac mlldgqdltp
      361 rwtfgttqvl rkpvlghykp ntpavlveng tgsdrqvlll dlgsgailws qalpglpgdp
      421 psaslptadh rsafffwgvh ktngsnqtep gatgrrlyml hptlpgvlle ldsvsspiva
      481 fqvvllelgr haacvlltgp aspnppglvs vtkqkvqdlv lggrvvrlae ggpesdqavr
      541 drlshlryrs ka
//
LOCUS       XP_061008382             552 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM234A isoform X1 [Dama dama].
ACCESSION   XP_061008382
VERSION     XP_061008382.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152399.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..552
                     /product="protein FAM234A isoform X1"
                     /calculated_mol_wt=58513
     Region          137..411
                     /region_name="PQQ_2"
                     /note="PQQ-like domain; pfam13360"
                     /db_xref="CDD:433144"
     CDS             1..552
                     /gene="FAM234A"
                     /coded_by="XM_061152399.1:105..1763"
                     /db_xref="GeneID:133063274"
ORIGIN      
        1 mtdgkdleae ihplksenrk vpentggpag keprgtpapq trlsrcrtaa fflslftcll
       61 vvfvvsfiip cpdrpasqgv wridynaava ydflatedvn kdkiqdilfl ykktnssrgn
      121 sslscadegf scpctfvaav sgangsilwe rpvaqdgafv ecgvlqprgs aapsacivlg
      181 rpgpliavdt ltgktlwsqp ssfggnasil spllrvpdld adgapdllvl vqeenqvngy
      241 iysggtgqqv sppdslgveg tsgsilhvtr agahyvlipc gtalcsrsvk glyekvsgrd
      301 sslksdplwe dmlsatshrl lvhssgairy lmnvpgkagd dlllvsaeac mlldgqdltp
      361 rwtfgttqvl rkpvlghykp ntpavlveng tgsdrqvlll dlgsgailws qalpglpgdp
      421 psaslptadh rsafffwgvh ktngsnqtep gatgrrlyml hptlpgvlle ldsvsspiva
      481 fqvvllelgr haacvlltgp aspnppglvs vtkqkvqdlv lggrvvrlae ggpesdqavr
      541 drlshlryrs ka
//
LOCUS       XP_061008383             552 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM234A isoform X1 [Dama dama].
ACCESSION   XP_061008383
VERSION     XP_061008383.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152400.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..552
                     /product="protein FAM234A isoform X1"
                     /calculated_mol_wt=58513
     Region          137..411
                     /region_name="PQQ_2"
                     /note="PQQ-like domain; pfam13360"
                     /db_xref="CDD:433144"
     CDS             1..552
                     /gene="FAM234A"
                     /coded_by="XM_061152400.1:75..1733"
                     /db_xref="GeneID:133063274"
ORIGIN      
        1 mtdgkdleae ihplksenrk vpentggpag keprgtpapq trlsrcrtaa fflslftcll
       61 vvfvvsfiip cpdrpasqgv wridynaava ydflatedvn kdkiqdilfl ykktnssrgn
      121 sslscadegf scpctfvaav sgangsilwe rpvaqdgafv ecgvlqprgs aapsacivlg
      181 rpgpliavdt ltgktlwsqp ssfggnasil spllrvpdld adgapdllvl vqeenqvngy
      241 iysggtgqqv sppdslgveg tsgsilhvtr agahyvlipc gtalcsrsvk glyekvsgrd
      301 sslksdplwe dmlsatshrl lvhssgairy lmnvpgkagd dlllvsaeac mlldgqdltp
      361 rwtfgttqvl rkpvlghykp ntpavlveng tgsdrqvlll dlgsgailws qalpglpgdp
      421 psaslptadh rsafffwgvh ktngsnqtep gatgrrlyml hptlpgvlle ldsvsspiva
      481 fqvvllelgr haacvlltgp aspnppglvs vtkqkvqdlv lggrvvrlae ggpesdqavr
      541 drlshlryrs ka
//
LOCUS       XP_061008385             552 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM234A isoform X1 [Dama dama].
ACCESSION   XP_061008385
VERSION     XP_061008385.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152402.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..552
                     /product="protein FAM234A isoform X1"
                     /calculated_mol_wt=58513
     Region          137..411
                     /region_name="PQQ_2"
                     /note="PQQ-like domain; pfam13360"
                     /db_xref="CDD:433144"
     CDS             1..552
                     /gene="FAM234A"
                     /coded_by="XM_061152402.1:90..1748"
                     /db_xref="GeneID:133063274"
ORIGIN      
        1 mtdgkdleae ihplksenrk vpentggpag keprgtpapq trlsrcrtaa fflslftcll
       61 vvfvvsfiip cpdrpasqgv wridynaava ydflatedvn kdkiqdilfl ykktnssrgn
      121 sslscadegf scpctfvaav sgangsilwe rpvaqdgafv ecgvlqprgs aapsacivlg
      181 rpgpliavdt ltgktlwsqp ssfggnasil spllrvpdld adgapdllvl vqeenqvngy
      241 iysggtgqqv sppdslgveg tsgsilhvtr agahyvlipc gtalcsrsvk glyekvsgrd
      301 sslksdplwe dmlsatshrl lvhssgairy lmnvpgkagd dlllvsaeac mlldgqdltp
      361 rwtfgttqvl rkpvlghykp ntpavlveng tgsdrqvlll dlgsgailws qalpglpgdp
      421 psaslptadh rsafffwgvh ktngsnqtep gatgrrlyml hptlpgvlle ldsvsspiva
      481 fqvvllelgr haacvlltgp aspnppglvs vtkqkvqdlv lggrvvrlae ggpesdqavr
      541 drlshlryrs ka
//
LOCUS       XP_061008386             552 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM234A isoform X1 [Dama dama].
ACCESSION   XP_061008386
VERSION     XP_061008386.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152403.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..552
                     /product="protein FAM234A isoform X1"
                     /calculated_mol_wt=58513
     Region          137..411
                     /region_name="PQQ_2"
                     /note="PQQ-like domain; pfam13360"
                     /db_xref="CDD:433144"
     CDS             1..552
                     /gene="FAM234A"
                     /coded_by="XM_061152403.1:171..1829"
                     /db_xref="GeneID:133063274"
ORIGIN      
        1 mtdgkdleae ihplksenrk vpentggpag keprgtpapq trlsrcrtaa fflslftcll
       61 vvfvvsfiip cpdrpasqgv wridynaava ydflatedvn kdkiqdilfl ykktnssrgn
      121 sslscadegf scpctfvaav sgangsilwe rpvaqdgafv ecgvlqprgs aapsacivlg
      181 rpgpliavdt ltgktlwsqp ssfggnasil spllrvpdld adgapdllvl vqeenqvngy
      241 iysggtgqqv sppdslgveg tsgsilhvtr agahyvlipc gtalcsrsvk glyekvsgrd
      301 sslksdplwe dmlsatshrl lvhssgairy lmnvpgkagd dlllvsaeac mlldgqdltp
      361 rwtfgttqvl rkpvlghykp ntpavlveng tgsdrqvlll dlgsgailws qalpglpgdp
      421 psaslptadh rsafffwgvh ktngsnqtep gatgrrlyml hptlpgvlle ldsvsspiva
      481 fqvvllelgr haacvlltgp aspnppglvs vtkqkvqdlv lggrvvrlae ggpesdqavr
      541 drlshlryrs ka
//
LOCUS       XP_061008387             552 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM234A isoform X1 [Dama dama].
ACCESSION   XP_061008387
VERSION     XP_061008387.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152404.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..552
                     /product="protein FAM234A isoform X1"
                     /calculated_mol_wt=58513
     Region          137..411
                     /region_name="PQQ_2"
                     /note="PQQ-like domain; pfam13360"
                     /db_xref="CDD:433144"
     CDS             1..552
                     /gene="FAM234A"
                     /coded_by="XM_061152404.1:122..1780"
                     /db_xref="GeneID:133063274"
ORIGIN      
        1 mtdgkdleae ihplksenrk vpentggpag keprgtpapq trlsrcrtaa fflslftcll
       61 vvfvvsfiip cpdrpasqgv wridynaava ydflatedvn kdkiqdilfl ykktnssrgn
      121 sslscadegf scpctfvaav sgangsilwe rpvaqdgafv ecgvlqprgs aapsacivlg
      181 rpgpliavdt ltgktlwsqp ssfggnasil spllrvpdld adgapdllvl vqeenqvngy
      241 iysggtgqqv sppdslgveg tsgsilhvtr agahyvlipc gtalcsrsvk glyekvsgrd
      301 sslksdplwe dmlsatshrl lvhssgairy lmnvpgkagd dlllvsaeac mlldgqdltp
      361 rwtfgttqvl rkpvlghykp ntpavlveng tgsdrqvlll dlgsgailws qalpglpgdp
      421 psaslptadh rsafffwgvh ktngsnqtep gatgrrlyml hptlpgvlle ldsvsspiva
      481 fqvvllelgr haacvlltgp aspnppglvs vtkqkvqdlv lggrvvrlae ggpesdqavr
      541 drlshlryrs ka
//
LOCUS       XP_061008388             456 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM234A isoform X2 [Dama dama].
ACCESSION   XP_061008388
VERSION     XP_061008388.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152405.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..456
                     /product="protein FAM234A isoform X2"
                     /calculated_mol_wt=47879
     Region          41..315
                     /region_name="PQQ_2"
                     /note="PQQ-like domain; pfam13360"
                     /db_xref="CDD:433144"
     CDS             1..456
                     /gene="FAM234A"
                     /coded_by="XM_061152405.1:251..1621"
                     /db_xref="GeneID:133063274"
ORIGIN      
        1 mkifssfsry ssrsaietns srgnsslsca degfscpctf vaavsgangs ilwerpvaqd
       61 gafvecgvlq prgsaapsac ivlgrpgpli avdtltgktl wsqpssfggn asilspllrv
      121 pdldadgapd llvlvqeenq vngyiysggt gqqvsppdsl gvegtsgsil hvtragahyv
      181 lipcgtalcs rsvkglyekv sgrdsslksd plwedmlsat shrllvhssg airylmnvpg
      241 kagddlllvs aeacmlldgq dltprwtfgt tqvlrkpvlg hykpntpavl vengtgsdrq
      301 vllldlgsga ilwsqalpgl pgdppsaslp tadhrsafff wgvhktngsn qtepgatgrr
      361 lymlhptlpg vlleldsvss pivafqvvll elgrhaacvl ltgpaspnpp glvsvtkqkv
      421 qdlvlggrvv rlaeggpesd qavrdrlshl ryrska
//
LOCUS       XP_061008389             868 aa            linear   MAM 02-DEC-2023
DEFINITION  axin-1 isoform X1 [Dama dama].
ACCESSION   XP_061008389
VERSION     XP_061008389.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152406.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..868
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..868
                     /product="axin-1 isoform X1"
                     /calculated_mol_wt=95687
     Region          11..80
                     /region_name="Axin_TNKS_binding"
                     /note="Tankyrase binding N-terminal segment of axin;
                     cd11582"
                     /db_xref="CDD:211424"
     Region          89..209
                     /region_name="RGS_Axin"
                     /note="Regulator of G protein signaling (RGS) domain found
                     in the Axin protein; cd08707"
                     /db_xref="CDD:188662"
     Site            order(93..96,99,116,119..120,123..124,126,139..140,
                     142..144,146..147)
                     /site_type="other"
                     /note="APC binding site [polypeptide binding]"
                     /db_xref="CDD:188662"
     Region          467..498
                     /region_name="Axin_b-cat_bind"
                     /note="Axin beta-catenin binding motif; pfam08833"
                     /db_xref="CDD:462616"
     Region          788..864
                     /region_name="DIX"
                     /note="DIX domain; pfam00778"
                     /db_xref="CDD:459936"
     CDS             1..868
                     /gene="AXIN1"
                     /coded_by="XM_061152406.1:129..2735"
                     /db_xref="GeneID:133063275"
ORIGIN      
        1 mniqeqgfpl dlgasfteda prppvpgeeg elvstdprpv shsfcsgkga gikgetstat
       61 prrsdldlgy epegsasptp pylkwaeslh sllddqdgin lfrtflkqed cadlldfwfa
      121 csgfrklepc dsneekrlkl araiyrkyil dnngivsrqt kpatksfikd ciskqqidpa
      181 mfdqaqtevq stmeentyps flksdiyley trtgsespkl csdqssgsga gkgvpgylpt
      241 lnedeewkcd revdeaggrd pappgrltqk llletaapra sssrrysegr efsrcgswre
      301 pvnpyyvnsg yalapatsan dseqqslssd adslsltdss vdgvppyrtr rqhrremqes
      361 vqangrvplp hiprtyrmpk evrvepqkfa aelihrleav qrtreaeeel eerlkrvrmq
      421 eeegedgdmp sgpqgtshkl psapawhhfp sryadvgcag lrdaheenpe sildehvqrv
      481 mrtpgcqspg pghrspdsth vpkigvlgga mpghgkhapk lgakldpagl hlhrhghhhg
      541 hhgaarpkep aeaeatrrvp ssfawgpelh ghtakprshv estgapptas dslayggkvg
      601 ttskrsskka elgkssstea pgpsedaekn qkimqwiieg ekeisrhrka ghgssgakkq
      661 qahessrpls ierpgavhpw vsaqlrssvq pshlfiqdpt mppnpapnpl tqleearrrl
      721 eeeekraska pskqryvqev iqrgrccvrp actpvlsavp avsdlelset etksqrktgg
      781 gsaqpcdsiv vayyfcgepi pyrtlvrgra vtlgqfkell tkkgnyrfyf kkvsdefecg
      841 vvfeevredt avlpvfeeki igkvekvd
//
LOCUS       XP_061008390             867 aa            linear   MAM 02-DEC-2023
DEFINITION  axin-1 isoform X2 [Dama dama].
ACCESSION   XP_061008390
VERSION     XP_061008390.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152407.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..867
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..867
                     /product="axin-1 isoform X2"
                     /calculated_mol_wt=95600
     Region          11..80
                     /region_name="Axin_TNKS_binding"
                     /note="Tankyrase binding N-terminal segment of axin;
                     cd11582"
                     /db_xref="CDD:211424"
     Region          89..209
                     /region_name="RGS_Axin"
                     /note="Regulator of G protein signaling (RGS) domain found
                     in the Axin protein; cd08707"
                     /db_xref="CDD:188662"
     Site            order(93..96,99,116,119..120,123..124,126,139..140,
                     142..144,146..147)
                     /site_type="other"
                     /note="APC binding site [polypeptide binding]"
                     /db_xref="CDD:188662"
     Region          466..497
                     /region_name="Axin_b-cat_bind"
                     /note="Axin beta-catenin binding motif; pfam08833"
                     /db_xref="CDD:462616"
     Region          787..863
                     /region_name="DIX"
                     /note="DIX domain; pfam00778"
                     /db_xref="CDD:459936"
     CDS             1..867
                     /gene="AXIN1"
                     /coded_by="XM_061152407.1:127..2730"
                     /db_xref="GeneID:133063275"
ORIGIN      
        1 mniqeqgfpl dlgasfteda prppvpgeeg elvstdprpv shsfcsgkga gikgetstat
       61 prrsdldlgy epegsasptp pylkwaeslh sllddqdgin lfrtflkqed cadlldfwfa
      121 csgfrklepc dsneekrlkl araiyrkyil dnngivsrqt kpatksfikd ciskqqidpa
      181 mfdqaqtevq stmeentyps flksdiyley trtgsespkl csdqssgsga gkgvpgylpt
      241 lnedeewkcd revdeaggrd pappgrltqk llletaapra sssrrysegr efrcgswrep
      301 vnpyyvnsgy alapatsand seqqslssda dslsltdssv dgvppyrtrr qhrremqesv
      361 qangrvplph iprtyrmpke vrvepqkfaa elihrleavq rtreaeeele erlkrvrmqe
      421 eegedgdmps gpqgtshklp sapawhhfps ryadvgcagl rdaheenpes ildehvqrvm
      481 rtpgcqspgp ghrspdsthv pkigvlggam pghgkhapkl gakldpaglh lhrhghhhgh
      541 hgaarpkepa eaeatrrvps sfawgpelhg htakprshve stgapptasd slayggkvgt
      601 tskrsskkae lgksssteap gpsedaeknq kimqwiiege keisrhrkag hgssgakkqq
      661 ahessrplsi erpgavhpwv saqlrssvqp shlfiqdptm ppnpapnplt qleearrrle
      721 eeekraskap skqryvqevi qrgrccvrpa ctpvlsavpa vsdlelsete tksqrktggg
      781 saqpcdsivv ayyfcgepip yrtlvrgrav tlgqfkellt kkgnyrfyfk kvsdefecgv
      841 vfeevredta vlpvfeekii gkvekvd
//
LOCUS       XP_061008391             867 aa            linear   MAM 02-DEC-2023
DEFINITION  axin-1 isoform X3 [Dama dama].
ACCESSION   XP_061008391
VERSION     XP_061008391.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152408.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..867
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..867
                     /product="axin-1 isoform X3"
                     /calculated_mol_wt=95559
     Region          11..80
                     /region_name="Axin_TNKS_binding"
                     /note="Tankyrase binding N-terminal segment of axin;
                     cd11582"
                     /db_xref="CDD:211424"
     Region          89..209
                     /region_name="RGS_Axin"
                     /note="Regulator of G protein signaling (RGS) domain found
                     in the Axin protein; cd08707"
                     /db_xref="CDD:188662"
     Site            order(93..96,99,116,119..120,123..124,126,139..140,
                     142..144,146..147)
                     /site_type="other"
                     /note="APC binding site [polypeptide binding]"
                     /db_xref="CDD:188662"
     Region          466..497
                     /region_name="Axin_b-cat_bind"
                     /note="Axin beta-catenin binding motif; pfam08833"
                     /db_xref="CDD:462616"
     Region          787..863
                     /region_name="DIX"
                     /note="DIX domain; pfam00778"
                     /db_xref="CDD:459936"
     CDS             1..867
                     /gene="AXIN1"
                     /coded_by="XM_061152408.1:129..2732"
                     /db_xref="GeneID:133063275"
ORIGIN      
        1 mniqeqgfpl dlgasfteda prppvpgeeg elvstdprpv shsfcsgkga gikgetstat
       61 prrsdldlgy epegsasptp pylkwaeslh sllddqdgin lfrtflkqed cadlldfwfa
      121 csgfrklepc dsneekrlkl araiyrkyil dnngivsrqt kpatksfikd ciskqqidpa
      181 mfdqaqtevq stmeentyps flksdiyley trtgsespkl csdqssgsga gkgvpgylpt
      241 lnedeewkcd revdeaggrd pappgrltqk llletaapra sssrrysegr efsrcgswre
      301 pvnpyyvnsg yalapatsan dseqqslssd adslsltdss vdgvppyrtr rqhrremqes
      361 vqangrvplp hiprtyrmpk evrvepqkfa aelihrleav qrtreaeeel eerlkrvrme
      421 eegedgdmps gpqgtshklp sapawhhfps ryadvgcagl rdaheenpes ildehvqrvm
      481 rtpgcqspgp ghrspdsthv pkigvlggam pghgkhapkl gakldpaglh lhrhghhhgh
      541 hgaarpkepa eaeatrrvps sfawgpelhg htakprshve stgapptasd slayggkvgt
      601 tskrsskkae lgksssteap gpsedaeknq kimqwiiege keisrhrkag hgssgakkqq
      661 ahessrplsi erpgavhpwv saqlrssvqp shlfiqdptm ppnpapnplt qleearrrle
      721 eeekraskap skqryvqevi qrgrccvrpa ctpvlsavpa vsdlelsete tksqrktggg
      781 saqpcdsivv ayyfcgepip yrtlvrgrav tlgqfkellt kkgnyrfyfk kvsdefecgv
      841 vfeevredta vlpvfeekii gkvekvd
//
LOCUS       XP_061008392             866 aa            linear   MAM 02-DEC-2023
DEFINITION  axin-1 isoform X4 [Dama dama].
ACCESSION   XP_061008392
VERSION     XP_061008392.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152409.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..866
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..866
                     /product="axin-1 isoform X4"
                     /calculated_mol_wt=95472
     Region          11..80
                     /region_name="Axin_TNKS_binding"
                     /note="Tankyrase binding N-terminal segment of axin;
                     cd11582"
                     /db_xref="CDD:211424"
     Region          89..209
                     /region_name="RGS_Axin"
                     /note="Regulator of G protein signaling (RGS) domain found
                     in the Axin protein; cd08707"
                     /db_xref="CDD:188662"
     Site            order(93..96,99,116,119..120,123..124,126,139..140,
                     142..144,146..147)
                     /site_type="other"
                     /note="APC binding site [polypeptide binding]"
                     /db_xref="CDD:188662"
     Region          465..496
                     /region_name="Axin_b-cat_bind"
                     /note="Axin beta-catenin binding motif; pfam08833"
                     /db_xref="CDD:462616"
     Region          786..862
                     /region_name="DIX"
                     /note="DIX domain; pfam00778"
                     /db_xref="CDD:459936"
     CDS             1..866
                     /gene="AXIN1"
                     /coded_by="XM_061152409.1:127..2727"
                     /db_xref="GeneID:133063275"
ORIGIN      
        1 mniqeqgfpl dlgasfteda prppvpgeeg elvstdprpv shsfcsgkga gikgetstat
       61 prrsdldlgy epegsasptp pylkwaeslh sllddqdgin lfrtflkqed cadlldfwfa
      121 csgfrklepc dsneekrlkl araiyrkyil dnngivsrqt kpatksfikd ciskqqidpa
      181 mfdqaqtevq stmeentyps flksdiyley trtgsespkl csdqssgsga gkgvpgylpt
      241 lnedeewkcd revdeaggrd pappgrltqk llletaapra sssrrysegr efrcgswrep
      301 vnpyyvnsgy alapatsand seqqslssda dslsltdssv dgvppyrtrr qhrremqesv
      361 qangrvplph iprtyrmpke vrvepqkfaa elihrleavq rtreaeeele erlkrvrmee
      421 egedgdmpsg pqgtshklps apawhhfpsr yadvgcaglr daheenpesi ldehvqrvmr
      481 tpgcqspgpg hrspdsthvp kigvlggamp ghgkhapklg akldpaglhl hrhghhhghh
      541 gaarpkepae aeatrrvpss fawgpelhgh takprshves tgapptasds layggkvgtt
      601 skrsskkael gksssteapg psedaeknqk imqwiiegek eisrhrkagh gssgakkqqa
      661 hessrplsie rpgavhpwvs aqlrssvqps hlfiqdptmp pnpapnpltq leearrrlee
      721 eekraskaps kqryvqeviq rgrccvrpac tpvlsavpav sdlelsetet ksqrktgggs
      781 aqpcdsivva yyfcgepipy rtlvrgravt lgqfkelltk kgnyrfyfkk vsdefecgvv
      841 feevredtav lpvfeekiig kvekvd
//
LOCUS       XP_061008393             832 aa            linear   MAM 02-DEC-2023
DEFINITION  axin-1 isoform X5 [Dama dama].
ACCESSION   XP_061008393
VERSION     XP_061008393.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152410.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..832
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..832
                     /product="axin-1 isoform X5"
                     /calculated_mol_wt=91786
     Region          11..80
                     /region_name="Axin_TNKS_binding"
                     /note="Tankyrase binding N-terminal segment of axin;
                     cd11582"
                     /db_xref="CDD:211424"
     Region          89..209
                     /region_name="RGS_Axin"
                     /note="Regulator of G protein signaling (RGS) domain found
                     in the Axin protein; cd08707"
                     /db_xref="CDD:188662"
     Site            order(93..96,99,116,119..120,123..124,126,139..140,
                     142..144,146..147)
                     /site_type="other"
                     /note="APC binding site [polypeptide binding]"
                     /db_xref="CDD:188662"
     Region          467..498
                     /region_name="Axin_b-cat_bind"
                     /note="Axin beta-catenin binding motif; pfam08833"
                     /db_xref="CDD:462616"
     Region          752..828
                     /region_name="DIX"
                     /note="DIX domain; pfam00778"
                     /db_xref="CDD:459936"
     CDS             1..832
                     /gene="AXIN1"
                     /coded_by="XM_061152410.1:127..2625"
                     /db_xref="GeneID:133063275"
ORIGIN      
        1 mniqeqgfpl dlgasfteda prppvpgeeg elvstdprpv shsfcsgkga gikgetstat
       61 prrsdldlgy epegsasptp pylkwaeslh sllddqdgin lfrtflkqed cadlldfwfa
      121 csgfrklepc dsneekrlkl araiyrkyil dnngivsrqt kpatksfikd ciskqqidpa
      181 mfdqaqtevq stmeentyps flksdiyley trtgsespkl csdqssgsga gkgvpgylpt
      241 lnedeewkcd revdeaggrd pappgrltqk llletaapra sssrrysegr efsrcgswre
      301 pvnpyyvnsg yalapatsan dseqqslssd adslsltdss vdgvppyrtr rqhrremqes
      361 vqangrvplp hiprtyrmpk evrvepqkfa aelihrleav qrtreaeeel eerlkrvrmq
      421 eeegedgdmp sgpqgtshkl psapawhhfp sryadvgcag lrdaheenpe sildehvqrv
      481 mrtpgcqspg pghrspdsth vpkigvlgga mpghgkhapk lgakldpagl hlhrhghhhg
      541 hhgaarpkep aeaeatrrvp ssfawgpelh ghtakprshv estgapptas dslayggkvg
      601 ttskrsskka elgkssstea pgpsedaekn qkimqwiieg ekeisrhrka ghgssgakkq
      661 qahessrpls ierpgavhpw vsaqlrssvq pshlfiqdpt mppnpapnpl tqleearrrl
      721 eeeekraska pskqrtksqr ktgggsaqpc dsivvayyfc gepipyrtlv rgravtlgqf
      781 kelltkkgny rfyfkkvsde fecgvvfeev redtavlpvf eekiigkvek vd
//
LOCUS       XP_061008394             830 aa            linear   MAM 02-DEC-2023
DEFINITION  axin-1 isoform X6 [Dama dama].
ACCESSION   XP_061008394
VERSION     XP_061008394.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152411.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..830
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..830
                     /product="axin-1 isoform X6"
                     /calculated_mol_wt=91571
     Region          11..80
                     /region_name="Axin_TNKS_binding"
                     /note="Tankyrase binding N-terminal segment of axin;
                     cd11582"
                     /db_xref="CDD:211424"
     Region          89..209
                     /region_name="RGS_Axin"
                     /note="Regulator of G protein signaling (RGS) domain found
                     in the Axin protein; cd08707"
                     /db_xref="CDD:188662"
     Site            order(93..96,99,116,119..120,123..124,126,139..140,
                     142..144,146..147)
                     /site_type="other"
                     /note="APC binding site [polypeptide binding]"
                     /db_xref="CDD:188662"
     Region          465..496
                     /region_name="Axin_b-cat_bind"
                     /note="Axin beta-catenin binding motif; pfam08833"
                     /db_xref="CDD:462616"
     Region          750..826
                     /region_name="DIX"
                     /note="DIX domain; pfam00778"
                     /db_xref="CDD:459936"
     CDS             1..830
                     /gene="AXIN1"
                     /coded_by="XM_061152411.1:125..2617"
                     /db_xref="GeneID:133063275"
ORIGIN      
        1 mniqeqgfpl dlgasfteda prppvpgeeg elvstdprpv shsfcsgkga gikgetstat
       61 prrsdldlgy epegsasptp pylkwaeslh sllddqdgin lfrtflkqed cadlldfwfa
      121 csgfrklepc dsneekrlkl araiyrkyil dnngivsrqt kpatksfikd ciskqqidpa
      181 mfdqaqtevq stmeentyps flksdiyley trtgsespkl csdqssgsga gkgvpgylpt
      241 lnedeewkcd revdeaggrd pappgrltqk llletaapra sssrrysegr efrcgswrep
      301 vnpyyvnsgy alapatsand seqqslssda dslsltdssv dgvppyrtrr qhrremqesv
      361 qangrvplph iprtyrmpke vrvepqkfaa elihrleavq rtreaeeele erlkrvrmee
      421 egedgdmpsg pqgtshklps apawhhfpsr yadvgcaglr daheenpesi ldehvqrvmr
      481 tpgcqspgpg hrspdsthvp kigvlggamp ghgkhapklg akldpaglhl hrhghhhghh
      541 gaarpkepae aeatrrvpss fawgpelhgh takprshves tgapptasds layggkvgtt
      601 skrsskkael gksssteapg psedaeknqk imqwiiegek eisrhrkagh gssgakkqqa
      661 hessrplsie rpgavhpwvs aqlrssvqps hlfiqdptmp pnpapnpltq leearrrlee
      721 eekraskaps kqrtksqrkt gggsaqpcds ivvayyfcge pipyrtlvrg ravtlgqfke
      781 lltkkgnyrf yfkkvsdefe cgvvfeevre dtavlpvfee kiigkvekvd
//
LOCUS       XP_061008395             764 aa            linear   MAM 02-DEC-2023
DEFINITION  post-GPI attachment to proteins factor 6 [Dama dama].
ACCESSION   XP_061008395
VERSION     XP_061008395.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152412.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..764
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..764
                     /product="post-GPI attachment to proteins factor 6"
                     /calculated_mol_wt=83824
     Region          539..720
                     /region_name="DUF3522"
                     /note="Protein of unknown function (DUF3522); pfam12036"
                     /db_xref="CDD:463441"
     CDS             1..764
                     /gene="PGAP6"
                     /coded_by="XM_061152412.1:43..2337"
                     /db_xref="GeneID:133063277"
ORIGIN      
        1 mrgagtgtgg aavavvmsll llllsrsppa aagdgrksds rlvseqfsqa pqklafyswy
       61 gsarlfhfrv psdtvllrwl lqvtqgsgst cnnvettvyf rygappvinp lgtsfansts
      121 vqpsfllkml qgnasvnvsy papgdwfvaa hlppsshnie vkdfiptcay ifqpdmlvvr
      181 vvemsilkpd vplplvllsq psylkvfvpk htrelrlelq gcvsngslgc pvhltvgsat
      241 lpgnfqkvlt csdpttacrl llpsppwerw lqvtakslag prvlvtfsav aaltacrpwt
      301 vnlqhplqss pnqssnastg ppppspntqd rdqsgeagsg pfclrsfpvl redmdvvsvr
      361 frpldrvsvl vqsdmpsvmq lylntgmdsg gslsisvnin qtviadntsv vacvtagspf
      421 lsfntslnct taffqgypls lsassptanl sipypetdnw ylslqvlcpe rpeecvqasv
      481 lvdttlylvp clndcgpygq clllrrhgyl yagcscragw rgwsctdnst aqtvaqqkva
      541 tllltlsnlv flapiaisvq rrllleasvy aytmffstfy hacdqpgdav lcilnydalq
      601 ycdflgsgvs vwvtvlcmar lkaslkyvlf mlgtlifams lqldrraawn tmgpclfaiv
      661 vmvtmwvyrc grrrhcypps wqrwvfyllp gfslaalalt iytsmmtsen yyythsiwhm
      721 llagsaafll pprdqhtepw acaqkltchy eicknhrdel ytvt
//
LOCUS       XP_061008396             351 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein bL28m [Dama dama].
ACCESSION   XP_061008396
VERSION     XP_061008396.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152413.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..351
                     /product="large ribosomal subunit protein bL28m"
                     /calculated_mol_wt=40165
     Region          173..231
                     /region_name="Ribosomal_L28"
                     /note="Ribosomal L28 family; pfam00830"
                     /db_xref="CDD:459953"
     CDS             1..351
                     /gene="MRPL28"
                     /coded_by="XM_061152413.1:928..1983"
                     /db_xref="GeneID:133063278"
ORIGIN      
        1 mmfqgkssyi vfcalsgrre ggteidkppq lptvpraaaf sagsflpsvk agkgagrggv
       61 drqplqpasq rrvegpmlrr dfrfrrgrds gklaamplhk vpvglwkrlr lregicsrlp
      121 phylrsleea rtptpvhfrp hgakfkinpk ngqrervedv aipvhyppes qlglwggegw
      181 lkgyryvnnd kfskrvkkvw kpqlfqrely seildtrftv tvtmrtldli deaygfdfyi
      241 lktpkedlcs kfgmdlkrgm llrlarqdpq lhpddperra aiydkykefv ipeaeaewvg
      301 ltldeavekq rlleekdpvp lfkvyveelv eqlqqqalse pavvqkranr t
//
LOCUS       XP_061008397             202 aa            linear   MAM 02-DEC-2023
DEFINITION  nucleoside diphosphate kinase, mitochondrial isoform X1 [Dama
            dama].
ACCESSION   XP_061008397
VERSION     XP_061008397.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152414.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..202
                     /product="nucleoside diphosphate kinase, mitochondrial
                     isoform X1"
                     /calculated_mol_wt=22107
     Region          53..182
                     /region_name="NDPk_I"
                     /note="Nucleoside diphosphate kinase Group I
                     (NDPk_I)-like: NDP kinase domains are present in a large
                     family of structurally and functionally conserved proteins
                     from bacteria to humans that generally catalyze the
                     transfer of gamma-phosphates of a nucleoside...; cd04413"
                     /db_xref="CDD:239876"
     Site            order(60,100,108,136,142,153,163,166,168..169,177)
                     /site_type="active"
                     /db_xref="CDD:239876"
     Site            order(64,69..71,74,77,86..88)
                     /site_type="other"
                     /note="multimer interface [polypeptide binding]"
                     /db_xref="CDD:239876"
     CDS             1..202
                     /gene="NME4"
                     /coded_by="XM_061152414.1:153..761"
                     /db_xref="GeneID:133063279"
ORIGIN      
        1 mntpilrrls arhipawsla virgssapaa gpralpeswg sntgeggpsw trertlvavk
       61 pdgvqrrlvg dviqrferrg fklvgmkmlq aperilaehy hdlqrkpfyp alisymssgp
      121 vvamvwegpn vvctsramig htnsakaapg tirgdfsthv srnvihasds vegaqreiql
      181 wfqsselvdw vdeghlssiy aa
//
LOCUS       XP_061008399             187 aa            linear   MAM 02-DEC-2023
DEFINITION  nucleoside diphosphate kinase, mitochondrial isoform X2 [Dama
            dama].
ACCESSION   XP_061008399
VERSION     XP_061008399.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152416.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..187
                     /product="nucleoside diphosphate kinase, mitochondrial
                     isoform X2"
                     /calculated_mol_wt=20372
     Region          38..167
                     /region_name="NDPk_I"
                     /note="Nucleoside diphosphate kinase Group I
                     (NDPk_I)-like: NDP kinase domains are present in a large
                     family of structurally and functionally conserved proteins
                     from bacteria to humans that generally catalyze the
                     transfer of gamma-phosphates of a nucleoside...; cd04413"
                     /db_xref="CDD:239876"
     Site            order(45,85,93,121,127,138,148,151,153..154,162)
                     /site_type="active"
                     /db_xref="CDD:239876"
     Site            order(49,54..56,59,62,71..73)
                     /site_type="other"
                     /note="multimer interface [polypeptide binding]"
                     /db_xref="CDD:239876"
     CDS             1..187
                     /gene="NME4"
                     /coded_by="XM_061152416.1:68..631"
                     /db_xref="GeneID:133063279"
ORIGIN      
        1 mrclsglaal rgllcgaral gpsllarscs ggpswtrert lvavkpdgvq rrlvgdviqr
       61 ferrgfklvg mkmlqaperi laehyhdlqr kpfypalisy mssgpvvamv wegpnvvcts
      121 ramightnsa kaapgtirgd fsthvsrnvi hasdsvegaq reiqlwfqss elvdwvdegh
      181 lssiyaa
//
LOCUS       XP_061008400             291 aa            linear   MAM 02-DEC-2023
DEFINITION  peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]
            isoform X1 [Dama dama].
ACCESSION   XP_061008400
VERSION     XP_061008400.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152417.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..291
                     /product="peroxisomal 2,4-dienoyl-CoA reductase
                     [(3E)-enoyl-CoA-producing] isoform X1"
                     /calculated_mol_wt=30634
     Region          26..273
                     /region_name="TER_DECR_SDR_a"
                     /note="Trans-2-enoyl-CoA reductase (TER) and
                     2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR;
                     cd05369"
                     /db_xref="CDD:187627"
     Site            order(35,38..40,59..61,85..88,113..115,136,163..165,182,
                     208..211,213)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187627"
     Site            order(60,88,115..118,126,128..129,132,165,167,178,210)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:187627"
     Site            order(90,121..123,125..127,130..131,134,138..139,142..143,
                     146,150,153,157,167,171..174,176,179..180,183..184,
                     187..188,190..197,199,210,234..236,238..240,244,247..248,
                     251,256,258..263,265..273)
                     /site_type="other"
                     /note="homotetramer interface [polypeptide binding]"
                     /db_xref="CDD:187627"
     Site            order(117,167,178,182)
                     /site_type="active"
                     /db_xref="CDD:187627"
     Site            order(121..123,125,130..131,134,139,142..143,171..174,176,
                     179..180,183..184,187..188,191,194..195)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:187627"
     CDS             1..291
                     /gene="DECR2"
                     /coded_by="XM_061152417.1:114..989"
                     /db_xref="GeneID:133063280"
ORIGIN      
        1 maqppadvse ddclpeyhhl fcpdllqdkv afitgggsgi gfriaeifmr hgchtviasr
       61 slprvsmaar klatatgrrc lplsldvrap lavaaaveqa lqefgkidil incaagnflc
      121 passlssnaf ktvmdidtlg tfnvsrvlye kffrdhggvi vnitatlgar gqvlqvhags
      181 akaavdamtr hlavewgpqn irvnslapgp isgteglrrl gapqaslran vlasplqrlg
      241 nkteiahsal flasplasfv tgallvvdgg twltfpndvq sladfspsak l
//
LOCUS       XP_061008401             258 aa            linear   MAM 02-DEC-2023
DEFINITION  peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]
            isoform X2 [Dama dama].
ACCESSION   XP_061008401
VERSION     XP_061008401.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152418.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..258
                     /product="peroxisomal 2,4-dienoyl-CoA reductase
                     [(3E)-enoyl-CoA-producing] isoform X2"
                     /calculated_mol_wt=27365
     Region          26..227
                     /region_name="TER_DECR_SDR_a"
                     /note="Trans-2-enoyl-CoA reductase (TER) and
                     2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR;
                     cd05369"
                     /db_xref="CDD:187627"
     Site            order(35,38..40,59..61,85..88,113..115,136,163..165,182,
                     208..211,213)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187627"
     Site            order(60,88,115..118,126,128..129,132,165,167,178,210)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:187627"
     Site            order(117,167,178,182)
                     /site_type="active"
                     /db_xref="CDD:187627"
     Site            order(121..123,125,130..131,134,139,142..143,171..174,176,
                     179..180,183..184,187..188,191,194..195)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:187627"
     CDS             1..258
                     /gene="DECR2"
                     /coded_by="XM_061152418.1:116..892"
                     /db_xref="GeneID:133063280"
ORIGIN      
        1 maqppadvse ddclpeyhhl fcpdllqdkv afitgggsgi gfriaeifmr hgchtviasr
       61 slprvsmaar klatatgrrc lplsldvrap lavaaaveqa lqefgkidil incaagnflc
      121 passlssnaf ktvmdidtlg tfnvsrvlye kffrdhggvi vnitatlgar gqvlqvhags
      181 akaavdamtr hlavewgpqn irvnslapgp isgteglrrl gsgqraarlv hsplsdprpa
      241 trppaqpecq tqqsqpsi
//
LOCUS       XP_061008402             696 aa            linear   MAM 02-DEC-2023
DEFINITION  rab11 family-interacting protein 3 isoform X1 [Dama dama].
ACCESSION   XP_061008402
VERSION     XP_061008402.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152419.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..696
                     /product="rab11 family-interacting protein 3 isoform X1"
                     /calculated_mol_wt=76892
     Region          <164..218
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     Region          <409..682
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          656..696
                     /region_name="RBD-FIP"
                     /note="FIP domain; pfam09457"
                     /db_xref="CDD:462805"
     CDS             1..696
                     /gene="RAB11FIP3"
                     /coded_by="XM_061152419.1:44..2134"
                     /db_xref="GeneID:133063281"
ORIGIN      
        1 mkmepgrpas paggpgpdpe pggpgapsap vrspglgpqd paagvdagrs pgwerrpqha
       61 grepypdpdp dsdpdlalpe lgslfswtme pegdgpahsa svraqefsrs hhlrgevdff
      121 psfaapevgd palelgpgdp dgpsdfsqth pltsepagcp edsprlravf daldgdgdgf
      181 vriedfvqfa tvygaeqvtd ltryldpsgl gvisfedfyr gieairngdp dgplcgvtpa
      241 pdeelpacpe efddfvtfea nevtdsaymg sestysecet ftdedtgtlv ppecldaaee
      301 pghgallllp grshlqgqsv vaviggeehf edygegsete lspetlcggd hgcrdpaflt
      361 psptkrlssk kvarhlqqsg altmdalqdp ppgpvegvde diadkvvfle krvselekdt
      421 aangeqhsrl rqenlqlvhr analeeqlke qelracemvl eetrkqkell ckmereksie
      481 ienlqarlqq ldeenselrs ctpclkanie rleeekqkll deieelsvrl sneqenrrkl
      541 gdrlsherhq fqrdkeatqe liedlrkqle hlqlfkleae qrrgrsssvg lqeyhsrtre
      601 seleqevrrl kqdnrslkeq ndelngqiin lsiqgarslf stafseslaa eissvsrdel
      661 mdaiqkqeei nfrlqdyidr iivaimetnp silevk
//
LOCUS       XP_061008403             596 aa            linear   MAM 02-DEC-2023
DEFINITION  rab11 family-interacting protein 3 isoform X2 [Dama dama].
ACCESSION   XP_061008403
VERSION     XP_061008403.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152420.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..596
                     /product="rab11 family-interacting protein 3 isoform X2"
                     /calculated_mol_wt=66686
     Region          <76..130
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     Region          <309..582
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          556..596
                     /region_name="RBD-FIP"
                     /note="FIP domain; pfam09457"
                     /db_xref="CDD:462805"
     CDS             1..596
                     /gene="RAB11FIP3"
                     /coded_by="XM_061152420.1:138..1928"
                     /db_xref="GeneID:133063281"
ORIGIN      
        1 mepegdgpah sasvraqefs rshhlrgevd ffpsfaapev gdpalelgpg dpdgpsdfsq
       61 thpltsepag cpedsprlra vfdaldgdgd gfvriedfvq fatvygaeqv tdltryldps
      121 glgvisfedf yrgieairng dpdgplcgvt papdeelpac peefddfvtf eanevtdsay
      181 mgsestysec etftdedtgt lvppecldaa eepghgalll lpgrshlqgq svvaviggee
      241 hfedygegse telspetlcg gdhgcrdpaf ltprhlqqsg altmdalqdp ppgpvegvde
      301 diadkvvfle krvselekdt aangeqhsrl rqenlqlvhr analeeqlke qelracemvl
      361 eetrkqkell ckmereksie ienlqarlqq ldeenselrs ctpclkanie rleeekqkll
      421 deieelsvrl sneqenrrkl gdrlsherhq fqrdkeatqe liedlrkqle hlqlfkleae
      481 qrrgrsssvg lqeyhsrtre seleqevrrl kqdnrslkeq ndelngqiin lsiqgarslf
      541 stafseslaa eissvsrdel mdaiqkqeei nfrlqdyidr iivaimetnp silevk
//
LOCUS       XP_061008404            1015 aa            linear   MAM 02-DEC-2023
DEFINITION  calpain-15 isoform X1 [Dama dama].
ACCESSION   XP_061008404
VERSION     XP_061008404.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152421.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1015
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1015
                     /product="calpain-15 isoform X1"
                     /calculated_mol_wt=108822
     Region          5..29
                     /region_name="ZnF_RBZ"
                     /note="Zinc finger domain; smart00547"
                     /db_xref="CDD:197784"
     Region          7..26
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          48..67
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          <86..442
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          133..152
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          334..353
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          402..421
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          463..777
                     /region_name="CysPc"
                     /note="Calpains, domains IIa, IIb; calcium-dependent
                     cytoplasmic cysteine proteinases, papain-like. Functions
                     in cytoskeletal remodeling processes, cell
                     differentiation, apoptosis and signal transduction;
                     cd00044"
                     /db_xref="CDD:238004"
     Site            order(538,703,723)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:238004"
     CDS             1..1015
                     /gene="CAPN15"
                     /coded_by="XM_061152421.1:23..3070"
                     /db_xref="GeneID:133063282"
ORIGIN      
        1 maavgewaca rctflnpagq rqcsiceapr hkpdldqilr lsveeqkwpc arctfrnllg
       61 rgacevcgfa pepgpgappl piingappep pgscrdevgp lrtagpvave pvggrpaeae
      121 gqeggaatpg sgwacqrctl hntpvasscs acggprklsl prippealvv pevvapagfp
      181 gvpapaqpge gaeanppsav dqepprgppf spfsptlqnn pvprsrrevp pqlqppvpea
      241 aqpspsagsk gppqglgrpa agasrlaell sgkrlsflee eaaeggptlr lpgpaspahc
      301 eagnttpgsd iidlggdsvr ytpaspsspd fttwscarct lrnptatprc tvcgcsklhg
      361 fqehgdapar cpdcsadrpg pcpahkagrp lpvapserpg qwacpactll naprakhcat
      421 chtpqllaaq rrgvaplrrr esvlvekrrq tdegeakalw edivafcren svnfvddsfp
      481 pgpasvgfpa gdsvqqrvrq wlrpheincs vfrdhgtsws vfhtlrpsdi lqgllgncwf
      541 lsalavlaer pdlvervmvt rslcaegayq vrlckdgtwt tvlvddmlpc deagfllfsq
      601 aqrkqlwval iekalaklhg syfalqagra ieglatltga pceslalqvs stnpreepvd
      661 tdliwakmls skeagflmga scgggnmkvd davyeslglr prhaysildv rdvqgsrllr
      721 lrnpwgrfsw ngswsdewph wpghlrselm phgssegvfw meysdfvryf dsvdickvhs
      781 dwqearvqgs fpssasgpvg vtaltvlera slefalfqeg srradsvdsh lldmcvlvfr
      841 asfgsggrls lgrllahskr avkkfvncdv mlepgeyavv ccafnhwgpv pgppalqgss
      901 psagasrstp eapghvlavy ssrlvmvepv eaqpttlada iilltesrge rhegregmtc
      961 yylthgwagl ivvvenrhpk sylhvqcdcs dsfnvvstrg slrtqdsvpp lhrsw
//
LOCUS       XP_061008405            1071 aa            linear   MAM 02-DEC-2023
DEFINITION  calpain-15 isoform X2 [Dama dama].
ACCESSION   XP_061008405
VERSION     XP_061008405.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152422.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1071
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1071
                     /product="calpain-15 isoform X2"
                     /calculated_mol_wt=114698
     Region          5..29
                     /region_name="ZnF_RBZ"
                     /note="Zinc finger domain; smart00547"
                     /db_xref="CDD:197784"
     Region          7..26
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          48..67
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          <86..442
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          133..152
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          334..353
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          402..421
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          463..777
                     /region_name="CysPc"
                     /note="Calpains, domains IIa, IIb; calcium-dependent
                     cytoplasmic cysteine proteinases, papain-like. Functions
                     in cytoskeletal remodeling processes, cell
                     differentiation, apoptosis and signal transduction;
                     cd00044"
                     /db_xref="CDD:238004"
     Site            order(538,703,723)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:238004"
     CDS             1..1071
                     /gene="CAPN15"
                     /coded_by="XM_061152422.1:174..3389"
                     /db_xref="GeneID:133063282"
ORIGIN      
        1 maavgewaca rctflnpagq rqcsiceapr hkpdldqilr lsveeqkwpc arctfrnllg
       61 rgacevcgfa pepgpgappl piingappep pgscrdevgp lrtagpvave pvggrpaeae
      121 gqeggaatpg sgwacqrctl hntpvasscs acggprklsl prippealvv pevvapagfp
      181 gvpapaqpge gaeanppsav dqepprgppf spfsptlqnn pvprsrrevp pqlqppvpea
      241 aqpspsagsk gppqglgrpa agasrlaell sgkrlsflee eaaeggptlr lpgpaspahc
      301 eagnttpgsd iidlggdsvr ytpaspsspd fttwscarct lrnptatprc tvcgcsklhg
      361 fqehgdapar cpdcsadrpg pcpahkagrp lpvapserpg qwacpactll naprakhcat
      421 chtpqllaaq rrgvaplrrr esvlvekrrq tdegeakalw edivafcren svnfvddsfp
      481 pgpasvgfpa gdsvqqrvrq wlrpheincs vfrdhgtsws vfhtlrpsdi lqgllgncwf
      541 lsalavlaer pdlvervmvt rslcaegayq vrlckdgtwt tvlvddmlpc deagfllfsq
      601 aqrkqlwval iekalaklhg syfalqagra ieglatltga pceslalqvs stnpreepvd
      661 tdliwakmls skeagflmga scgggnmkvd davyeslglr prhaysildv rdvqgsrllr
      721 lrnpwgrfsw ngswsdewph wpghlrselm phgssegvfw meysdfvryf dsvdickvhs
      781 dwqearvqgs fpssasgpvg vtaltvlera slefalfqeg srradsvdsh lldmcvlvfr
      841 asfgsggrls lgrllahskr avkkfvncdv mlepgeyavv ccafnhwgpv pgppalqgss
      901 psagasrstp eapghvlavy ssrlvmvepv eaqpttlada iilltesrge rhegregmtc
      961 yylthgwagl ivvvenrhpk sylhvqcdcs dsfnvvstrg slrtqdsvpp lhrqvlvils
     1021 qlegnagfsi thrlahrkaa qaflsdwtas kgshsppltp evaglhgprp l
//
LOCUS       XP_061008406            1071 aa            linear   MAM 02-DEC-2023
DEFINITION  calpain-15 isoform X2 [Dama dama].
ACCESSION   XP_061008406
VERSION     XP_061008406.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152423.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1071
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1071
                     /product="calpain-15 isoform X2"
                     /calculated_mol_wt=114698
     Region          5..29
                     /region_name="ZnF_RBZ"
                     /note="Zinc finger domain; smart00547"
                     /db_xref="CDD:197784"
     Region          7..26
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          48..67
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          <86..442
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          133..152
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          334..353
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          402..421
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          463..777
                     /region_name="CysPc"
                     /note="Calpains, domains IIa, IIb; calcium-dependent
                     cytoplasmic cysteine proteinases, papain-like. Functions
                     in cytoskeletal remodeling processes, cell
                     differentiation, apoptosis and signal transduction;
                     cd00044"
                     /db_xref="CDD:238004"
     Site            order(538,703,723)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:238004"
     CDS             1..1071
                     /gene="CAPN15"
                     /coded_by="XM_061152423.1:730..3945"
                     /db_xref="GeneID:133063282"
ORIGIN      
        1 maavgewaca rctflnpagq rqcsiceapr hkpdldqilr lsveeqkwpc arctfrnllg
       61 rgacevcgfa pepgpgappl piingappep pgscrdevgp lrtagpvave pvggrpaeae
      121 gqeggaatpg sgwacqrctl hntpvasscs acggprklsl prippealvv pevvapagfp
      181 gvpapaqpge gaeanppsav dqepprgppf spfsptlqnn pvprsrrevp pqlqppvpea
      241 aqpspsagsk gppqglgrpa agasrlaell sgkrlsflee eaaeggptlr lpgpaspahc
      301 eagnttpgsd iidlggdsvr ytpaspsspd fttwscarct lrnptatprc tvcgcsklhg
      361 fqehgdapar cpdcsadrpg pcpahkagrp lpvapserpg qwacpactll naprakhcat
      421 chtpqllaaq rrgvaplrrr esvlvekrrq tdegeakalw edivafcren svnfvddsfp
      481 pgpasvgfpa gdsvqqrvrq wlrpheincs vfrdhgtsws vfhtlrpsdi lqgllgncwf
      541 lsalavlaer pdlvervmvt rslcaegayq vrlckdgtwt tvlvddmlpc deagfllfsq
      601 aqrkqlwval iekalaklhg syfalqagra ieglatltga pceslalqvs stnpreepvd
      661 tdliwakmls skeagflmga scgggnmkvd davyeslglr prhaysildv rdvqgsrllr
      721 lrnpwgrfsw ngswsdewph wpghlrselm phgssegvfw meysdfvryf dsvdickvhs
      781 dwqearvqgs fpssasgpvg vtaltvlera slefalfqeg srradsvdsh lldmcvlvfr
      841 asfgsggrls lgrllahskr avkkfvncdv mlepgeyavv ccafnhwgpv pgppalqgss
      901 psagasrstp eapghvlavy ssrlvmvepv eaqpttlada iilltesrge rhegregmtc
      961 yylthgwagl ivvvenrhpk sylhvqcdcs dsfnvvstrg slrtqdsvpp lhrqvlvils
     1021 qlegnagfsi thrlahrkaa qaflsdwtas kgshsppltp evaglhgprp l
//
LOCUS       XP_061008407            1071 aa            linear   MAM 02-DEC-2023
DEFINITION  calpain-15 isoform X2 [Dama dama].
ACCESSION   XP_061008407
VERSION     XP_061008407.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152424.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1071
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1071
                     /product="calpain-15 isoform X2"
                     /calculated_mol_wt=114698
     Region          5..29
                     /region_name="ZnF_RBZ"
                     /note="Zinc finger domain; smart00547"
                     /db_xref="CDD:197784"
     Region          7..26
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          48..67
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          <86..442
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          133..152
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          334..353
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          402..421
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          463..777
                     /region_name="CysPc"
                     /note="Calpains, domains IIa, IIb; calcium-dependent
                     cytoplasmic cysteine proteinases, papain-like. Functions
                     in cytoskeletal remodeling processes, cell
                     differentiation, apoptosis and signal transduction;
                     cd00044"
                     /db_xref="CDD:238004"
     Site            order(538,703,723)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:238004"
     CDS             1..1071
                     /gene="CAPN15"
                     /coded_by="XM_061152424.1:187..3402"
                     /db_xref="GeneID:133063282"
ORIGIN      
        1 maavgewaca rctflnpagq rqcsiceapr hkpdldqilr lsveeqkwpc arctfrnllg
       61 rgacevcgfa pepgpgappl piingappep pgscrdevgp lrtagpvave pvggrpaeae
      121 gqeggaatpg sgwacqrctl hntpvasscs acggprklsl prippealvv pevvapagfp
      181 gvpapaqpge gaeanppsav dqepprgppf spfsptlqnn pvprsrrevp pqlqppvpea
      241 aqpspsagsk gppqglgrpa agasrlaell sgkrlsflee eaaeggptlr lpgpaspahc
      301 eagnttpgsd iidlggdsvr ytpaspsspd fttwscarct lrnptatprc tvcgcsklhg
      361 fqehgdapar cpdcsadrpg pcpahkagrp lpvapserpg qwacpactll naprakhcat
      421 chtpqllaaq rrgvaplrrr esvlvekrrq tdegeakalw edivafcren svnfvddsfp
      481 pgpasvgfpa gdsvqqrvrq wlrpheincs vfrdhgtsws vfhtlrpsdi lqgllgncwf
      541 lsalavlaer pdlvervmvt rslcaegayq vrlckdgtwt tvlvddmlpc deagfllfsq
      601 aqrkqlwval iekalaklhg syfalqagra ieglatltga pceslalqvs stnpreepvd
      661 tdliwakmls skeagflmga scgggnmkvd davyeslglr prhaysildv rdvqgsrllr
      721 lrnpwgrfsw ngswsdewph wpghlrselm phgssegvfw meysdfvryf dsvdickvhs
      781 dwqearvqgs fpssasgpvg vtaltvlera slefalfqeg srradsvdsh lldmcvlvfr
      841 asfgsggrls lgrllahskr avkkfvncdv mlepgeyavv ccafnhwgpv pgppalqgss
      901 psagasrstp eapghvlavy ssrlvmvepv eaqpttlada iilltesrge rhegregmtc
      961 yylthgwagl ivvvenrhpk sylhvqcdcs dsfnvvstrg slrtqdsvpp lhrqvlvils
     1021 qlegnagfsi thrlahrkaa qaflsdwtas kgshsppltp evaglhgprp l
//
LOCUS       XP_061008409             882 aa            linear   MAM 02-DEC-2023
DEFINITION  calpain-15 isoform X3 [Dama dama].
ACCESSION   XP_061008409
VERSION     XP_061008409.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152426.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..882
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..882
                     /product="calpain-15 isoform X3"
                     /calculated_mol_wt=93559
     Region          5..29
                     /region_name="ZnF_RBZ"
                     /note="Zinc finger domain; smart00547"
                     /db_xref="CDD:197784"
     Region          7..26
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          48..67
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          <86..442
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          133..152
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          334..353
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          402..421
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          463..768
                     /region_name="CysPc"
                     /note="Calpains, domains IIa, IIb; calcium-dependent
                     cytoplasmic cysteine proteinases, papain-like. Functions
                     in cytoskeletal remodeling processes, cell
                     differentiation, apoptosis and signal transduction;
                     cd00044"
                     /db_xref="CDD:238004"
     Site            order(538,703,723)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:238004"
     CDS             1..882
                     /gene="CAPN15"
                     /coded_by="XM_061152426.1:23..2671"
                     /db_xref="GeneID:133063282"
ORIGIN      
        1 maavgewaca rctflnpagq rqcsiceapr hkpdldqilr lsveeqkwpc arctfrnllg
       61 rgacevcgfa pepgpgappl piingappep pgscrdevgp lrtagpvave pvggrpaeae
      121 gqeggaatpg sgwacqrctl hntpvasscs acggprklsl prippealvv pevvapagfp
      181 gvpapaqpge gaeanppsav dqepprgppf spfsptlqnn pvprsrrevp pqlqppvpea
      241 aqpspsagsk gppqglgrpa agasrlaell sgkrlsflee eaaeggptlr lpgpaspahc
      301 eagnttpgsd iidlggdsvr ytpaspsspd fttwscarct lrnptatprc tvcgcsklhg
      361 fqehgdapar cpdcsadrpg pcpahkagrp lpvapserpg qwacpactll naprakhcat
      421 chtpqllaaq rrgvaplrrr esvlvekrrq tdegeakalw edivafcren svnfvddsfp
      481 pgpasvgfpa gdsvqqrvrq wlrpheincs vfrdhgtsws vfhtlrpsdi lqgllgncwf
      541 lsalavlaer pdlvervmvt rslcaegayq vrlckdgtwt tvlvddmlpc deagfllfsq
      601 aqrkqlwval iekalaklhg syfalqagra ieglatltga pceslalqvs stnpreepvd
      661 tdliwakmls skeagflmga scgggnmkvd davyeslglr prhaysildv rdvqgsrllr
      721 lrnpwgrfsw ngswsdewph wpghlrselm phgssegvfw meysdfvrfq elpaaeracc
      781 ghpaqgrmpc rqlgggrsag yplaaqvlrl rgylqgalrl aggsgarqlp qlsqraggrd
      841 gphgagarlp gvcplpggqq arglsgqspp ghvclgvpgl lr
//
LOCUS       XP_061008410             581 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphatidylinositol N-acetylglucosaminyltransferase subunit Q
            isoform X1 [Dama dama].
ACCESSION   XP_061008410
VERSION     XP_061008410.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152427.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..581
                     /product="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit Q isoform X1"
                     /calculated_mol_wt=65373
     Region          <316..509
                     /region_name="Gpi1"
                     /note="N-acetylglucosaminyl transferase component (Gpi1);
                     pfam05024"
                     /db_xref="CDD:461527"
     CDS             1..581
                     /gene="PIGQ"
                     /coded_by="XM_061152427.1:83..1828"
                     /db_xref="GeneID:133063284"
ORIGIN      
        1 mvlkaffptc casadsgllv grwvpeqssa vvlavvhfpf ipvqvkella qvqqasrvgv
       61 avlgtwchrr qepeeslghf leglgalfsh epwlqlcrer gskswsckat rrqgpgplap
      121 acedpvmlif ydqrkvllsq lhppaalper qagdatasag glaavfdtva rsevlfqsdr
      181 fdegpvrlth wqsegmeasi lvelakraag pvclllacll slvstasacr vfrlwplsfi
      241 wsklstceql rhrldqltlv vsarraegpa qlmrkantlv svlldmalgl lllswlhrkd
      301 rfaqlaealv pvadrvaeel qhllqwlmga paglkmnral dqvlgrffly hihlwisyih
      361 lmspfiehil whlglsaclg ltvalsilsd iislltfhiy cfyvygarly clkihglssl
      421 wrlfrgkkwn vlrqrvdscs ydldqlfigt llftilifll pttalyylvf tllrllvvtv
      481 qglvhllvdl inslplyslg lrlcrpyrla agvkfrvleh eagrplrllm qinplpfshv
      541 vrtyrlpscg chpkhswgsl crklffgeli ypwrqrgdkq d
//
LOCUS       XP_061008411             581 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphatidylinositol N-acetylglucosaminyltransferase subunit Q
            isoform X1 [Dama dama].
ACCESSION   XP_061008411
VERSION     XP_061008411.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152428.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..581
                     /product="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit Q isoform X1"
                     /calculated_mol_wt=65373
     Region          <316..509
                     /region_name="Gpi1"
                     /note="N-acetylglucosaminyl transferase component (Gpi1);
                     pfam05024"
                     /db_xref="CDD:461527"
     CDS             1..581
                     /gene="PIGQ"
                     /coded_by="XM_061152428.1:106..1851"
                     /db_xref="GeneID:133063284"
ORIGIN      
        1 mvlkaffptc casadsgllv grwvpeqssa vvlavvhfpf ipvqvkella qvqqasrvgv
       61 avlgtwchrr qepeeslghf leglgalfsh epwlqlcrer gskswsckat rrqgpgplap
      121 acedpvmlif ydqrkvllsq lhppaalper qagdatasag glaavfdtva rsevlfqsdr
      181 fdegpvrlth wqsegmeasi lvelakraag pvclllacll slvstasacr vfrlwplsfi
      241 wsklstceql rhrldqltlv vsarraegpa qlmrkantlv svlldmalgl lllswlhrkd
      301 rfaqlaealv pvadrvaeel qhllqwlmga paglkmnral dqvlgrffly hihlwisyih
      361 lmspfiehil whlglsaclg ltvalsilsd iislltfhiy cfyvygarly clkihglssl
      421 wrlfrgkkwn vlrqrvdscs ydldqlfigt llftilifll pttalyylvf tllrllvvtv
      481 qglvhllvdl inslplyslg lrlcrpyrla agvkfrvleh eagrplrllm qinplpfshv
      541 vrtyrlpscg chpkhswgsl crklffgeli ypwrqrgdkq d
//
LOCUS       XP_061008412             527 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphatidylinositol N-acetylglucosaminyltransferase subunit Q
            isoform X2 [Dama dama].
ACCESSION   XP_061008412
VERSION     XP_061008412.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152429.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..527
                     /product="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit Q isoform X2"
                     /calculated_mol_wt=57078
     Region          <316..>357
                     /region_name="Gpi1"
                     /note="N-acetylglucosaminyl transferase component (Gpi1);
                     pfam05024"
                     /db_xref="CDD:461527"
     CDS             1..527
                     /gene="PIGQ"
                     /coded_by="XM_061152429.1:11..1594"
                     /db_xref="GeneID:133063284"
ORIGIN      
        1 mvlkaffptc casadsgllv grwvpeqssa vvlavvhfpf ipvqvkella qvqqasrvgv
       61 avlgtwchrr qepeeslghf leglgalfsh epwlqlcrer gskswsckat rrqgpgplap
      121 acedpvmlif ydqrkvllsq lhppaalper qagdatasag glaavfdtva rsevlfqsdr
      181 fdegpvrlth wqsegmeasi lvelakraag pvclllacll slvstasacr vfrlwplsfi
      241 wsklstceql rhrldqltlv vsarraegpa qlmrkantlv svlldmalgl lllswlhrkd
      301 rfaqlaealv pvadrvaeel qhllqwlmga paglkmnral dqvlgrffly hihlwisecp
      361 papwlhpphv pihrahpval gslglpgpdg cpvhpvghhf psylphllll rlrrqallpe
      421 dprpvlavap vpreevecpa pacgllllrp gpavhrylal hhpdfsaahh gpvlpgvhpa
      481 papgghragl gpsargphql aaavlarppa vpalqargrc evpgpga
//
LOCUS       XP_061008413             281 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-related protein Rab-40C isoform X1 [Dama dama].
ACCESSION   XP_061008413
VERSION     XP_061008413.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152430.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..281
                     /product="ras-related protein Rab-40C isoform X1"
                     /calculated_mol_wt=31187
     Region          9..281
                     /region_name="Rab40"
                     /note="Rab GTPase family 40 (Rab40) contains Rab40a,
                     Rab40b and Rab40c; cd04121"
                     /db_xref="CDD:133321"
     Site            15..16
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:133321"
     Site            21..28
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:133321"
     Site            order(23..29,39,46,72,126..127,129,156..158)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:133321"
     Site            29..39
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:133321"
     Site            order(39,46..52)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:133321"
     Site            46
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:133321"
     Site            order(47,49..51,66,68,75..76,79,83,88)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:133321"
     Site            order(47..48,50,68..69,76,78,80..82)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:133321"
     Site            47..51
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:133321"
     Site            order(48..55,62,64)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:133321"
     Site            64..68
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:133321"
     Site            69..72
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:133321"
     Site            order(72,74..84)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:133321"
     Site            75..80
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:133321"
     Site            83..87
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:133321"
     Site            92..97
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:133321"
     Site            115..123
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:133321"
     Site            126..129
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:133321"
     Site            156..158
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:133321"
     Site            172..178
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:133321"
     Region          187..229
                     /region_name="SOCS_Rab40"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     Rab40-like proteins. Rab40 is part of the Rab family of
                     small GTP-binding proteins that form the largest family
                     within the Ras superfamily. Rab proteins regulate
                     vesicular trafficking pathways, behaving as...; cd03742"
                     /db_xref="CDD:239711"
     Site            order(188..193,199,206,212,217)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239711"
     Site            278..281
                     /site_type="other"
                     /note="putative lipid modification site [posttranslational
                     modification]"
                     /db_xref="CDD:133321"
     CDS             1..281
                     /gene="RAB40C"
                     /coded_by="XM_061152430.1:317..1162"
                     /db_xref="GeneID:133063285"
ORIGIN      
        1 mgtqgspvks ydyllkfllv gdsdvgkgei leslqdgaae spyaysngid yktttilldg
       61 rrvklelwdt sgqgrfctif rsysrgaqgi llvyditnrw sfdgidrwik eidehapgvp
      121 rilvgnrlhl afkrqvpteq arayaekncm tffevsplcn fnviesftel srivlmrhgm
      181 ekiwrpnrvf slqdlccrai vsctpvhlid klplpvtiks hlksfsmang mnavmmhgrs
      241 yslasgaggg gskgnslkrs ksirppqspp qncsrsncki s
//
LOCUS       XP_061008414             281 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-related protein Rab-40C isoform X1 [Dama dama].
ACCESSION   XP_061008414
VERSION     XP_061008414.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152431.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..281
                     /product="ras-related protein Rab-40C isoform X1"
                     /calculated_mol_wt=31187
     Region          9..281
                     /region_name="Rab40"
                     /note="Rab GTPase family 40 (Rab40) contains Rab40a,
                     Rab40b and Rab40c; cd04121"
                     /db_xref="CDD:133321"
     Site            15..16
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:133321"
     Site            21..28
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:133321"
     Site            order(23..29,39,46,72,126..127,129,156..158)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:133321"
     Site            29..39
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:133321"
     Site            order(39,46..52)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:133321"
     Site            46
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:133321"
     Site            order(47,49..51,66,68,75..76,79,83,88)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:133321"
     Site            order(47..48,50,68..69,76,78,80..82)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:133321"
     Site            47..51
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:133321"
     Site            order(48..55,62,64)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:133321"
     Site            64..68
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:133321"
     Site            69..72
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:133321"
     Site            order(72,74..84)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:133321"
     Site            75..80
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:133321"
     Site            83..87
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:133321"
     Site            92..97
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:133321"
     Site            115..123
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:133321"
     Site            126..129
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:133321"
     Site            156..158
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:133321"
     Site            172..178
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:133321"
     Region          187..229
                     /region_name="SOCS_Rab40"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     Rab40-like proteins. Rab40 is part of the Rab family of
                     small GTP-binding proteins that form the largest family
                     within the Ras superfamily. Rab proteins regulate
                     vesicular trafficking pathways, behaving as...; cd03742"
                     /db_xref="CDD:239711"
     Site            order(188..193,199,206,212,217)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239711"
     Site            278..281
                     /site_type="other"
                     /note="putative lipid modification site [posttranslational
                     modification]"
                     /db_xref="CDD:133321"
     CDS             1..281
                     /gene="RAB40C"
                     /coded_by="XM_061152431.1:92..937"
                     /db_xref="GeneID:133063285"
ORIGIN      
        1 mgtqgspvks ydyllkfllv gdsdvgkgei leslqdgaae spyaysngid yktttilldg
       61 rrvklelwdt sgqgrfctif rsysrgaqgi llvyditnrw sfdgidrwik eidehapgvp
      121 rilvgnrlhl afkrqvpteq arayaekncm tffevsplcn fnviesftel srivlmrhgm
      181 ekiwrpnrvf slqdlccrai vsctpvhlid klplpvtiks hlksfsmang mnavmmhgrs
      241 yslasgaggg gskgnslkrs ksirppqspp qncsrsncki s
//
LOCUS       XP_061008415             245 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-related protein Rab-40C isoform X2 [Dama dama].
ACCESSION   XP_061008415
VERSION     XP_061008415.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152432.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..245
                     /product="ras-related protein Rab-40C isoform X2"
                     /calculated_mol_wt=27102
     Region          <49..245
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            90..93
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            120..122
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     Region          151..193
                     /region_name="SOCS_Rab40"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     Rab40-like proteins. Rab40 is part of the Rab family of
                     small GTP-binding proteins that form the largest family
                     within the Ras superfamily. Rab proteins regulate
                     vesicular trafficking pathways, behaving as...; cd03742"
                     /db_xref="CDD:239711"
     Site            order(152..157,163,170,176,181)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239711"
     CDS             1..245
                     /gene="RAB40C"
                     /coded_by="XM_061152432.1:121..858"
                     /db_xref="GeneID:133063285"
ORIGIN      
        1 mrcvtcdpaa tptdepgarv aaagkgpgvp gglhqdplwv rrrlwalerq qqgillvydi
       61 tnrwsfdgid rwikeideha pgvprilvgn rlhlafkrqv pteqarayae kncmtffevs
      121 plcnfnvies ftelsrivlm rhgmekiwrp nrvfslqdlc craivsctpv hlidklplpv
      181 tikshlksfs mangmnavmm hgrsyslasg aggggskgns lkrsksirpp qsppqncsrs
      241 nckis
//
LOCUS       XP_061008416             550 aa            linear   MAM 02-DEC-2023
DEFINITION  WAP, Kazal, immunoglobulin, Kunitz and NTR domain-containing
            protein 1 [Dama dama].
ACCESSION   XP_061008416
VERSION     XP_061008416.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152433.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..550
                     /product="WAP, Kazal, immunoglobulin, Kunitz and NTR
                     domain-containing protein 1"
                     /calculated_mol_wt=58667
     Region          43..78
                     /region_name="WAP"
                     /note="WAP-type (Whey Acidic Protein) 'four-disulfide
                     core'; pfam00095"
                     /db_xref="CDD:459672"
     Region          121..156
                     /region_name="KAZAL_FS"
                     /note="Kazal type serine protease inhibitors and
                     follistatin-like domains. Kazal inhibitors inhibit serine
                     proteases, such as, trypsin, chyomotrypsin, avian
                     ovomucoids, and elastases. The inhibitory domain has one
                     reactive site peptide bond, which serves the...; cd00104"
                     /db_xref="CDD:238052"
     Region          187..281
                     /region_name="IgI_3_WFIKKN-like"
                     /note="Third immunoglobulin-like domain of the human
                     WFIKKN (WAP, follistatin, immunoglobulin, Kunitz and NTR
                     domain-containing protein), and similar domains; member of
                     the I-set of Ig superfamily (IgSF) domains; cd05765"
                     /db_xref="CDD:409422"
     Region          187..190
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409422"
     Region          195..198
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409422"
     Region          203..210
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409422"
     Region          217..222
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409422"
     Region          223..225
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409422"
     Region          227..232
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409422"
     Region          240..246
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409422"
     Region          260..268
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409422"
     Region          271..281
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409422"
     Region          300..352
                     /region_name="Kunitz-type"
                     /note="Kunitz/Bovine pancreatic trypsin inhibitor (BPTI)
                     domain; cl00101"
                     /db_xref="CDD:444694"
     Site            order(307..311,314..316,331,335)
                     /site_type="other"
                     /note="putative serine protease binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438633"
     Region          359..411
                     /region_name="Kunitz_WFIKKN_2-like"
                     /note="second Kunitz domain of WAP, Kazal, immunoglobulin,
                     Kunitz and NTR domain-containing proteins; cd22606"
                     /db_xref="CDD:438649"
     Site            order(366..370,372..374,389,393)
                     /site_type="other"
                     /note="putative serine protease binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438649"
     Region          428..539
                     /region_name="NTR_like"
                     /note="NTR_like domain; a beta barrel with an
                     oligosaccharide/oligonucleotide-binding fold found in
                     netrins, complement proteins, tissue inhibitors of
                     metalloproteases (TIMP), and procollagen C-proteinase
                     enhancers (PCOLCE), amongst others. In netrins, the...;
                     cl02512"
                     /db_xref="CDD:470599"
     CDS             1..550
                     /gene="WFIKKN1"
                     /coded_by="XM_061152433.1:1150..2802"
                     /db_xref="GeneID:133063286"
ORIGIN      
        1 mpalrpllpl lllagltvga slppgpgghp gvcpnqlspn lwvdaqstce recvgdqdca
       61 atekcctnvc glqscvaarf pdggpaaprl aascegfvca qqgsdcdiwd gqpvcrcrdr
      121 cekepsftca sdgltyynrc ymdaeaclrg lrlhvvpckh vlswppsspr ppettarptp
      181 gdapvppaly sspspqavyv ggtaslhcdv sgrpppavtw ekqsdqrenl imrpdqmygn
      241 vvvtsigqlv lynaqpedag lytctarnaa gllradfpls vvqrdparag aheaatapaq
      301 clpstqacvg ppsgrvlwhf dpqrrgcmtf pvgscaggaq gfetyeacqq acardpgdac
      361 alpavqgpcq gweprwaysp llqhchpfey sgcegngnnf esrescehac pvprtppcra
      421 crlrsklals lcrsdfaivg rltevleepe agggsiarva ldevlkddkm glrllgtkyl
      481 evtlvgvdra cpcpnvtagd gplvimgevr dgvamldags yvrtasekrv kkitellerk
      541 acellnrfqd
//
LOCUS       XP_061008418             227 aa            linear   MAM 02-DEC-2023
DEFINITION  MAPK regulated corepressor interacting protein 2 isoform X1 [Dama
            dama].
ACCESSION   XP_061008418
VERSION     XP_061008418.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152435.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..227
                     /product="MAPK regulated corepressor interacting protein 2
                     isoform X1"
                     /calculated_mol_wt=25094
     Region          128..224
                     /region_name="FAM195"
                     /note="FAM195 family; pfam14799"
                     /db_xref="CDD:464321"
     CDS             1..227
                     /gene="MCRIP2"
                     /coded_by="XM_061152435.1:16..699"
                     /db_xref="GeneID:133063287"
ORIGIN      
        1 mlpagaegae padparlqla tatprfrltw hlagsegigl gvrdtppspg apctqrreea
       61 drlldfrgsr rlsqlrtddl rvvplsaeee praavghlsp gwragrrdre claewhvqpr
      121 tpgshlllpg prlvfnrvng rrppatspsf egtqepytla heenvrfvse awqqveqqlg
      181 ggpagesgpr pvqyvertpn prlqnfvpid ldewwaqqfl aritncs
//
LOCUS       XP_061008419             207 aa            linear   MAM 02-DEC-2023
DEFINITION  MAPK regulated corepressor interacting protein 2 isoform X2 [Dama
            dama].
ACCESSION   XP_061008419
VERSION     XP_061008419.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152436.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..207
                     /product="MAPK regulated corepressor interacting protein 2
                     isoform X2"
                     /calculated_mol_wt=23188
     Region          108..204
                     /region_name="FAM195"
                     /note="FAM195 family; pfam14799"
                     /db_xref="CDD:464321"
     CDS             1..207
                     /gene="MCRIP2"
                     /coded_by="XM_061152436.1:92..715"
                     /db_xref="GeneID:133063287"
ORIGIN      
        1 mytitkgpsk lvaqrrtgpt qqqvesrlge llkcrhsapi pqhpraqppg pwplsrmllf
       61 ilvplsaeee praavghlsp gwragrrdre claewhvqpr tpgshlllpg prlvfnrvng
      121 rrppatspsf egtqepytla heenvrfvse awqqveqqlg ggpagesgpr pvqyvertpn
      181 prlqnfvpid ldewwaqqfl aritncs
//
LOCUS       XP_061008420             193 aa            linear   MAM 02-DEC-2023
DEFINITION  MAPK regulated corepressor interacting protein 2 isoform X3 [Dama
            dama].
ACCESSION   XP_061008420
VERSION     XP_061008420.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152437.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..193
                     /product="MAPK regulated corepressor interacting protein 2
                     isoform X3"
                     /calculated_mol_wt=21382
     Region          128..190
                     /region_name="FAM195"
                     /note="FAM195 family; pfam14799"
                     /db_xref="CDD:464321"
     CDS             1..193
                     /gene="MCRIP2"
                     /coded_by="XM_061152437.1:38..619"
                     /db_xref="GeneID:133063287"
ORIGIN      
        1 mlpagaegae padparlqla tatprfrltw hlagsegigl gvrdtppspg apctqrreea
       61 drlldfrgsr rlsqlrtddl rvvplsaeee praavghlsp gwragrrdre claewhvqpr
      121 tpgshlllpg prlvfnrvng rrppatspsf egtqepytla heenvrfvse dfvpidldew
      181 waqqflarit ncs
//
LOCUS       XP_061008421             172 aa            linear   MAM 02-DEC-2023
DEFINITION  MAPK regulated corepressor interacting protein 2 isoform X4 [Dama
            dama].
ACCESSION   XP_061008421
VERSION     XP_061008421.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152438.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..172
                     /product="MAPK regulated corepressor interacting protein 2
                     isoform X4"
                     /calculated_mol_wt=19154
     Region          73..169
                     /region_name="FAM195"
                     /note="FAM195 family; pfam14799"
                     /db_xref="CDD:464321"
     CDS             1..172
                     /gene="MCRIP2"
                     /coded_by="XM_061152438.1:116..634"
                     /db_xref="GeneID:133063287"
ORIGIN      
        1 mrdavsgrld snwgrgnhsn rgipevvvpl saeeepraav ghlspgwrag rrdreclaew
       61 hvqprtpgsh lllpgprlvf nrvngrrppa tspsfegtqe pytlaheenv rfvseawqqv
      121 eqqlgggpag esgprpvqyv ertpnprlqn fvpidldeww aqqflaritn cs
//
LOCUS       XP_061008422             155 aa            linear   MAM 02-DEC-2023
DEFINITION  MAPK regulated corepressor interacting protein 2 isoform X5 [Dama
            dama].
ACCESSION   XP_061008422
VERSION     XP_061008422.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152439.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..155
                     /product="MAPK regulated corepressor interacting protein 2
                     isoform X5"
                     /calculated_mol_wt=17267
     Region          56..152
                     /region_name="FAM195"
                     /note="FAM195 family; pfam14799"
                     /db_xref="CDD:464321"
     CDS             1..155
                     /gene="MCRIP2"
                     /coded_by="XM_061152439.1:92..559"
                     /db_xref="GeneID:133063287"
ORIGIN      
        1 mytitkgpsk lvaqrrtgpt qqqvesrlge llkcrhsapi pqhpraqppg pwplsspgpr
       61 lvfnrvngrr ppatspsfeg tqepytlahe envrfvseaw qqveqqlggg pagesgprpv
      121 qyvertpnpr lqnfvpidld ewwaqqflar itncs
//
LOCUS       XP_061008423             122 aa            linear   MAM 02-DEC-2023
DEFINITION  MAPK regulated corepressor interacting protein 2 isoform X6 [Dama
            dama].
ACCESSION   XP_061008423
VERSION     XP_061008423.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152440.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..122
                     /product="MAPK regulated corepressor interacting protein 2
                     isoform X6"
                     /calculated_mol_wt=13288
     CDS             1..122
                     /gene="MCRIP2"
                     /coded_by="XM_061152440.1:78..446"
                     /db_xref="GeneID:133063287"
ORIGIN      
        1 mlpagaegae padparlqla tatprfrltw hlagsegigl gvrdtppspg apctqrreea
       61 drlldfrgsr rlsqlrtddl rvgkswglcc capstcpppq yrpempqcps qlrrnparrw
      121 gt
//
LOCUS       XP_061008424             121 aa            linear   MAM 02-DEC-2023
DEFINITION  MAPK regulated corepressor interacting protein 2 isoform X7 [Dama
            dama].
ACCESSION   XP_061008424
VERSION     XP_061008424.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152441.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..121
                     /product="MAPK regulated corepressor interacting protein 2
                     isoform X7"
                     /calculated_mol_wt=13555
     Region          56..118
                     /region_name="FAM195"
                     /note="FAM195 family; pfam14799"
                     /db_xref="CDD:464321"
     CDS             1..121
                     /gene="MCRIP2"
                     /coded_by="XM_061152441.1:92..457"
                     /db_xref="GeneID:133063287"
ORIGIN      
        1 mytitkgpsk lvaqrrtgpt qqqvesrlge llkcrhsapi pqhpraqppg pwplsspgpr
       61 lvfnrvngrr ppatspsfeg tqepytlahe envrfvsedf vpidldewwa qqflaritnc
      121 s
//
LOCUS       XP_061008425            1852 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 90 isoform X1 [Dama dama].
ACCESSION   XP_061008425
VERSION     XP_061008425.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152442.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1852
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1852
                     /product="WD repeat-containing protein 90 isoform X1"
                     /calculated_mol_wt=199067
     Region          2..178
                     /region_name="CFA20_dom"
                     /note="CFA20 domain; pfam05018"
                     /db_xref="CDD:461521"
     Region          <419..745
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          432..470
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          477..520
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          527..567
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          575..629
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          605..1020
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          676..712
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          717..755
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          762..795
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          801..841
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          849..894
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          901..925
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          945..990
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1220..1686
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          1242..1284
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1289..1325
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1333..1371
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1383..1418
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1479..1515
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1509..1849
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(1516,1534,1538,1544..1545,1557,1606,1624,1628,
                     1645..1646,1658..1659,1676,1680,1686,1689,1711,1743,1748,
                     1766..1767,1779..1780,1797,1801,1807..1808,1819..1820,
                     1837,1847..1848)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          1520..1556
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1563..1603
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1610..1657
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..1852
                     /gene="WDR90"
                     /coded_by="XM_061152442.1:77..5635"
                     /db_xref="GeneID:133063288"
ORIGIN      
        1 marvwqqpfl nvfrhfkvde wkrstkegdv aavtdktlkc tvyrvrgsvs asnyiqlpkt
       61 stqslglngr ylyvlfrplp akhfvihldv stedsqvirv sfsnlfkefk statwlqfpf
      121 vceagttreg vafpgarwtc lqldlhdill vylhrcyshl kgvrlcasml vrslytsdls
      181 fdpaitvaea rraklpvtpi premafpvpk geswhdryvh irfpsgsshv pselvqksgf
      241 ppeaaghmpw llpspaacsk pardpralvv qkhdpttasr wapamprplp evrvscerse
      301 vssvadpggc sqepsawvet teehaasdgl hvfahqamdp tapedaaphe ppgrkqnlpe
      361 aalgkkcfqe rsflpdpilr lkgvigfggh stkwalwtpd gaavvypcha vivvlhietr
      421 eqrlflghte kvsalaldgs gsllasaqaw phsmlrlwdf htgsclalfr spvhticsls
      481 fsssgellcg vgkdrhgrtt vlvwdvaqlg rggeavilak ahsdadvqaf qvaffdearm
      541 ascgrgsvrl wrlrggalrs cavdlgehha leftdlafgp aqdghtlyvc srsghileid
      601 hqhmavrhar rllplqnprd plaqkqtfsl gpgiaissls vsrsvcavgs edgylrlwpl
      661 dfssvlleae hegpvtsvhv spgglrvlst tssghlgfld vpsqaysvlv rshtapvlal
      721 atersrgqla tvsqdhtvrv wdlvtlqqly dfalpeeapr avafhptqpt ffcgfssgav
      781 rsfsleaaev lvehrchrga itglatspdg rflfstcsrg tlaqyhsgap rcrvlrvaan
      841 vvcqeacpss svlvvsgdsr llafvgpsky tvsvvdaasl dellrvdvsa ldlagsclds
      901 pvalcfgssp pghllvstss ntiavldars grvvrelscg rpaacaslal sadgrfllta
      961 aeravrlwdy avqaspscqv catpppqvyi ghsepvrava ftpdqqqlls vgdaiflwdi
     1021 lvpregcppe svqgapgapl tceadpdaeq legvasgarg plqqvsvspp alpprpglca
     1081 gppegfdgtl fpsdeshgpe dprqasgpsv mvqkeagrag egacgvtgsp rdlgrrphpc
     1141 gwpsacstgg arawppahpn syrhftaryk asspaqglsl ppagdeqlrl kavvgyngng
     1201 ranlvwrpdt gffaytcgcl vvvedlhsga qqhwlghpee istlalshda qvlasasgrs
     1261 saasccqirl wdvprgscrq llghhdtvvq alafspddrl lvtlggygdd tlalwsmatc
     1321 elvssthlpe pvhgvafnpw dagkltcvgr gvltlqllwg ragdvslqah repvpkeagg
     1381 welsslcyga tpllycgsse gqvcvwdtra grcflawead dgeigvllcs gtwlvsgsnt
     1441 rrlrlwavga vpelrrrgsg arsssvfler eltldgaivs avfhdsmdmg vvgttagtlw
     1501 yiswaegtst rlisghrskv nevafspdes hcatcsddgs vrvwcvaste lliqfqvlnq
     1561 sclclawspl scrrpeeqyv aagysdgalr ifsiprtave lkmyphaaal talafsadgq
     1621 tivsgdkdgl vavshpctgm tfrvlsdhrg apictlqstr kecgdfgaeg tdlwlaasgd
     1681 qrvsvwasdw lrdhcelvdw lsfpapgltg vsvlaapwar cpgrppctvp pqapgclpps
     1741 laafcpwdpa llvcaglgvh pevvfyslrq kqvvekiplp ffavsmslsp gahlvaigfs
     1801 ermvrlldcs sgavqdfagh ddsvqlcrfa psaqllftaa yseilvwevt gr
//
LOCUS       XP_061008426            1844 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 90 isoform X2 [Dama dama].
ACCESSION   XP_061008426
VERSION     XP_061008426.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152443.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1844
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1844
                     /product="WD repeat-containing protein 90 isoform X2"
                     /calculated_mol_wt=198274
     Region          2..178
                     /region_name="CFA20_dom"
                     /note="CFA20 domain; pfam05018"
                     /db_xref="CDD:461521"
     Region          <419..745
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          432..470
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          477..520
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          527..567
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          575..629
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          605..1012
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          676..712
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          717..755
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          762..795
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          801..841
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          849..894
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          901..925
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          945..982
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1212..1678
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          1234..1276
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1281..1317
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1325..1363
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1375..1410
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1471..1507
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1501..1841
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(1508,1526,1530,1536..1537,1549,1598,1616,1620,
                     1637..1638,1650..1651,1668,1672,1678,1681,1703,1735,1740,
                     1758..1759,1771..1772,1789,1793,1799..1800,1811..1812,
                     1829,1839..1840)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          1512..1548
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1555..1595
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1602..1649
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..1844
                     /gene="WDR90"
                     /coded_by="XM_061152443.1:77..5611"
                     /db_xref="GeneID:133063288"
ORIGIN      
        1 marvwqqpfl nvfrhfkvde wkrstkegdv aavtdktlkc tvyrvrgsvs asnyiqlpkt
       61 stqslglngr ylyvlfrplp akhfvihldv stedsqvirv sfsnlfkefk statwlqfpf
      121 vceagttreg vafpgarwtc lqldlhdill vylhrcyshl kgvrlcasml vrslytsdls
      181 fdpaitvaea rraklpvtpi premafpvpk geswhdryvh irfpsgsshv pselvqksgf
      241 ppeaaghmpw llpspaacsk pardpralvv qkhdpttasr wapamprplp evrvscerse
      301 vssvadpggc sqepsawvet teehaasdgl hvfahqamdp tapedaaphe ppgrkqnlpe
      361 aalgkkcfqe rsflpdpilr lkgvigfggh stkwalwtpd gaavvypcha vivvlhietr
      421 eqrlflghte kvsalaldgs gsllasaqaw phsmlrlwdf htgsclalfr spvhticsls
      481 fsssgellcg vgkdrhgrtt vlvwdvaqlg rggeavilak ahsdadvqaf qvaffdearm
      541 ascgrgsvrl wrlrggalrs cavdlgehha leftdlafgp aqdghtlyvc srsghileid
      601 hqhmavrhar rllplqnprd plaqkqtfsl gpgiaissls vsrsvcavgs edgylrlwpl
      661 dfssvlleae hegpvtsvhv spgglrvlst tssghlgfld vpsqaysvlv rshtapvlal
      721 atersrgqla tvsqdhtvrv wdlvtlqqly dfalpeeapr avafhptqpt ffcgfssgav
      781 rsfsleaaev lvehrchrga itglatspdg rflfstcsrg tlaqyhsgap rcrvlrvaan
      841 vvcqeacpss svlvvsgdsr llafvgpsky tvsvvdaasl dellrvdvsa ldlagsclds
      901 pvalcfgssp pghllvstss ntiavldars grvvrelscg rpaacaslal sadgrfllta
      961 aeravrlwdy avqaspscqv yighsepvra vaftpdqqql lsvgdaiflw dilvpregcp
     1021 pesvqgapga pltceadpda eqlegvasga rgplqqvsvs ppalpprpgl cagppegfdg
     1081 tlfpsdeshg pedprqasgp svmvqkeagr agegacgvtg sprdlgrrph pcgwpsacst
     1141 ggarawppah pnsyrhftar ykasspaqgl slppagdeql rlkavvgyng ngranlvwrp
     1201 dtgffaytcg clvvvedlhs gaqqhwlghp eeistlalsh daqvlasasg rssaasccqi
     1261 rlwdvprgsc rqllghhdtv vqalafspdd rllvtlggyg ddtlalwsma tcelvssthl
     1321 pepvhgvafn pwdagkltcv grgvltlqll wgragdvslq ahrepvpkea ggwelsslcy
     1381 gatpllycgs segqvcvwdt ragrcflawe addgeigvll csgtwlvsgs ntrrlrlwav
     1441 gavpelrrrg sgarsssvfl ereltldgai vsavfhdsmd mgvvgttagt lwyiswaegt
     1501 strlisghrs kvnevafspd eshcatcsdd gsvrvwcvas telliqfqvl nqsclclaws
     1561 plscrrpeeq yvaagysdga lrifsiprta velkmyphaa altalafsad gqtivsgdkd
     1621 glvavshpct gmtfrvlsdh rgapictlqs trkecgdfga egtdlwlaas gdqrvsvwas
     1681 dwlrdhcelv dwlsfpapgl tgvsvlaapw arcpgrppct vppqapgclp pslaafcpwd
     1741 pallvcaglg vhpevvfysl rqkqvvekip lpffavsmsl spgahlvaig fsermvrlld
     1801 cssgavqdfa ghddsvqlcr fapsaqllft aayseilvwe vtgr
//
LOCUS       XP_061008428             622 aa            linear   MAM 02-DEC-2023
DEFINITION  mitochondrial Rho GTPase 2 [Dama dama].
ACCESSION   XP_061008428
VERSION     XP_061008428.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152445.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..622
                     /product="mitochondrial Rho GTPase 2"
                     /calculated_mol_wt=68269
     Region          3..169
                     /region_name="Miro1"
                     /note="Mitochondrial Rho family 1 (Miro1), N-terminal;
                     cd01893"
                     /db_xref="CDD:206680"
     Site            order(6,35..36,38..39,41,43,52,56..57,59..61,68,71)
                     /site_type="other"
                     /note="putative GEF (guanine nucleotide exchange factor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206680"
     Site            11..18
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206680"
     Site            order(14..19,57..58,60,119,121,149..150)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206680"
     Site            34..40
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206680"
     Site            35
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206680"
     Site            order(36,59,68,70)
                     /site_type="active"
                     /note="putative GDI (guanine nucleotide dissociation
                     inhibitor) interaction [active]"
                     /db_xref="CDD:206680"
     Site            order(36..37,61,68)
                     /site_type="other"
                     /note="putative GAP (GTPase-activating protein)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206680"
     Site            order(37..38,68,71)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206680"
     Site            57..60
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206680"
     Site            order(60..61,68..71,75..77)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206680"
     Site            118..121
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206680"
     Site            148..150
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206680"
     Region          220..303
                     /region_name="EF_assoc_2"
                     /note="EF hand associated; pfam08356"
                     /db_xref="CDD:462444"
     Region          <307..>336
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     Region          341..409
                     /region_name="EF_assoc_1"
                     /note="EF hand associated; pfam08355"
                     /db_xref="CDD:462443"
     Region          414..593
                     /region_name="Miro2"
                     /note="Mitochondrial Rho family 2 (Miro2), C-terminal;
                     cd01892"
                     /db_xref="CDD:206679"
     Site            424..431
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206679"
     Site            order(427..432,474..475,477,529,531,560..561)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206679"
     Site            order(448..451,453..457)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206679"
     Site            449
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206679"
     Site            474..477
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206679"
     Site            order(476..487,490..492)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206679"
     Site            528..531
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206679"
     Site            559..561
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206679"
     CDS             1..622
                     /gene="RHOT2"
                     /coded_by="XM_061152445.1:109..1977"
                     /db_xref="GeneID:133063289"
ORIGIN      
        1 mkrdvrilll geaqvgktsl ilslvgeefp eevparaeei tipadvtpek vpthivdyse
       61 teqtveelqg eidkadvvcv vydvseeatv ekirtkwipl vngdtkrgpr vpiilvgnka
      121 dlrpggsmea vlpimsqfpe ietcvecsak nlkniselfy yaqkavlhpt aplydpeakq
      181 lrpacaqalt rifklsdqdm dqalsdqeln afqtscfghp lapqaledvk mvvsknvagg
      241 vrddrltldg flflntlfiq rgrhettwti lrrfgygdsl eltadylcpp lhvppgcsae
      301 lnhrgyqfvq rmfekhdqdr dgalslaelq slfsvfpaap wgpqlpstvr tkagrlplhg
      361 ylcqwtlvty ldvrrslehl gylgyptlce qdsqahaitv trekrldqek gqtqrnvllc
      421 kvvgahgvgk ssflqaflgh glghqdawep agepsvyaid tvqvngqeky lilcevaads
      481 lltasadasc dvaclmfdgs dprsfalcas vykqhymdgq tpclfvcska dlpggvplpg
      541 lspaefcrrh rlpapapfsc agpveprlgi ftrlatmatf phlvhgqlqa tsfwlrvalg
      601 avgaavaavl sfslyrvlvk sr
//
LOCUS       XP_061008429             373 aa            linear   MAM 02-DEC-2023
DEFINITION  rhomboid-related protein 1 [Dama dama].
ACCESSION   XP_061008429
VERSION     XP_061008429.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152446.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..373
                     /product="rhomboid-related protein 1"
                     /calculated_mol_wt=41764
     Region          174..328
                     /region_name="Rhomboid"
                     /note="Rhomboid family; pfam01694"
                     /db_xref="CDD:426384"
     CDS             1..373
                     /gene="RHBDL1"
                     /coded_by="XM_061152446.1:72..1193"
                     /db_xref="GeneID:133063290"
ORIGIN      
        1 mdrssllqli qeqqldpent gfigadtftg lvhrhelpld pakldmlval aqsnergqvc
       61 yqelvdliss krsssfkrai angqralprd glldepglgv ykrfvryvay eilprevdrh
      121 wyfyrhrscp ppvfmasvtl aqiivflcyg arlnkwvlqt yhpeymkspl vyhpghrara
      181 wrfltymfmh vgleqlgfna llqlmigvpl emvhgllris llylagvlag sltvsitdmr
      241 apvvggsggv yalcsahlan vvmnwagmrc pykllrmvla lvcmssevgr avwlrfsppl
      301 pasgpqpsfm ahlagavvgv smgltilrsy eerlrdqcgw wvvllaygtf llfaifwnif
      361 aydllgahip ppp
//
LOCUS       XP_061008430             232 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133063291 [Dama dama].
ACCESSION   XP_061008430
VERSION     XP_061008430.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152447.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..232
                     /product="uncharacterized protein LOC133063291"
                     /calculated_mol_wt=25088
     Region          115..>152
                     /region_name="HHH_5"
                     /note="Helix-hairpin-helix domain; pfam14520"
                     /db_xref="CDD:434010"
     CDS             1..232
                     /gene="LOC133063291"
                     /coded_by="XM_061152447.1:33..731"
                     /db_xref="GeneID:133063291"
ORIGIN      
        1 maaagglwsc adpsrwaavl echgavlrar agpqgrleal drwyreelpa aiearaekhv
       61 tqdelerlla wklargrfrp rlrqlvaans pelvvqrsaa afrllpdmha avmalctlrg
      121 vgpatasavl aagapevaaf mseeavaavp glpalqytvk hyllylsrmq eratalsrgs
      181 asglwtphhv etalwtwavg rkmcpnllpn lgpspvpaed irpakkrrtq ae
//
LOCUS       XP_061008431             790 aa            linear   MAM 02-DEC-2023
DEFINITION  GATOR2 complex protein WDR24 [Dama dama].
ACCESSION   XP_061008431
VERSION     XP_061008431.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152448.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..790
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..790
                     /product="GATOR2 complex protein WDR24"
                     /calculated_mol_wt=88163
     Region          <6..324
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          75..118
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          124..161
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          166..203
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          211..247
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          254..294
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          742..787
                     /region_name="mRING-H2-C3H3C2_WDR24"
                     /note="Modified RING finger, H2 subclass (C3H3C2-type),
                     found in WD repeat-containing protein 24 (WDR24) and
                     similar proteins; cd16693"
                     /db_xref="CDD:438354"
     CDS             1..790
                     /gene="WDR24"
                     /coded_by="XM_061152448.1:623..2995"
                     /db_xref="GeneID:133063292"
ORIGIN      
        1 mekmsrvtta lsgsvltgrt mhchldapan aisvcrdaaq vvvagrsifk iyaieeeqfv
       61 eklnlrvgrk pslnlscadv vwhqmdenll ataatngvvv twnlgrpsrn kqdqlftehk
      121 rtvnkvcfhp teahvllsgs qdgfmkcfdl rrkdsvstfs gqsesvrdvq fsirdyftfa
      181 stfengnvql wdirrpdrce rmftahngpv fccdwhpedr gwlatggrdk mvkvwdmath
      241 rakevhcvqt iasvarvkwr pecrhhlatc smmvdhnvyv wdvrrpfvpa amfeehrdvt
      301 tgiawrhphd psfllsgskd stlcqhlfrd asqpveranp eglcyglfgd lafaakeslv
      361 atesgrkpya gdrrhpiffk rkldpaepfa glassalnvf eiepgsgsms wfvdtaerya
      421 lagrplaelc dhnakvarel grnqvaqtwt mlriiycspg lvpttnlnhs vgkgsscglp
      481 lmnsfnlkdm apglgsetrl drskgdtrsd tvlldssatl itnedneete gsdvptdyll
      541 gdvegeddel ylldpehahs eepeyvlpqe afplrheivd tppgpehlqd kadsphvsgs
      601 eadaaslmpv dssfslisvs halcdsrlpp dffsalvcdm lrfyaeqgdv qmavsvlivl
      661 gervrkdide qtqehwytsy idllqrfclw nvsnqvvkls tsraisclnq asttlhvncs
      721 hckrpmssrg wvcdrcrrca smcavchhvv kglfvwcqgc shgghlqhim kwlegsshcp
      781 agcghlceys
//
LOCUS       XP_061008432             482 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box/LRR-repeat protein 16 [Dama dama].
ACCESSION   XP_061008432
VERSION     XP_061008432.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152449.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..482
                     /product="F-box/LRR-repeat protein 16"
                     /calculated_mol_wt=51851
     Region          98..139
                     /region_name="F-box_FBXL16"
                     /note="F-box domain found in F-box/LRR-repeat protein 16
                     (FBXL16) and similar proteins; cd22127"
                     /db_xref="CDD:438899"
     Site            order(100,104,107..108,111..112,116,118..119,123..125,127)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438899"
     Region          204..416
                     /region_name="AMN1"
                     /note="Antagonist of mitotic exit network protein 1;
                     cd09293"
                     /db_xref="CDD:187754"
     Region          223..246
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          247..272
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          273..298
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          299..324
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          325..350
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          351..376
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          377..401
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          402..421
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          427..451
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          452..477
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..482
                     /gene="FBXL16"
                     /coded_by="XM_061152449.1:119..1567"
                     /db_xref="GeneID:133063293"
ORIGIN      
        1 msspgidgdp kppclprngl vklpgqpngl gaasitkgtp aaknrpcqpp pptlpppsla
       61 apppraalag glcpqaglpl ggpalapvsg ppaerpplat dekilnglfw yfsacekcvl
      121 aqvckawrrv lyqpkfwagl tpvlhakely tvlpggekef vnlqgfaarg fegfclvgvs
      181 dldicefidn yalskkgvka mslkrstitd aglevmleqm qgvvrlelsg cndfteaglw
      241 sslsaritsl svsdcinvad daiaaisqll pnlaelslqa yhvtdtalay ftarqghsth
      301 tlrllscwei tnhgvvnvvh slpnltalsl sgcskvtddg velvaenlrk lrsldlswcp
      361 ritdmaleyv acdlhrleel vldrcvritd tglsylstms slrslylrwc cqvqdfglkh
      421 llamrslrll slagcpllta tglsglvqlq dleeleltnc pgatpelfky fsqhlprclv
      481 ve
//
LOCUS       XP_061008433             303 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase CHIP [Dama dama].
ACCESSION   XP_061008433
VERSION     XP_061008433.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152450.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..303
                     /product="E3 ubiquitin-protein ligase CHIP"
                     /calculated_mol_wt=34817
     Region          25..>124
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          26..54
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(27,30..31,34..35,37,61,64..65,68..69,71..72,95,
                     98..99,102..103,106)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          59..89
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          94..121
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          142..225
                     /region_name="CHIP_TPR_N"
                     /note="CHIP N-terminal tetratricopeptide repeat domain;
                     pfam18391"
                     /db_xref="CDD:436460"
     Region          227..297
                     /region_name="RING-Ubox_CHIP"
                     /note="U-box domain, a modified RING finger, found in
                     carboxyl terminus of HSP70-interacting protein (CHIP) and
                     similar proteins; cd16654"
                     /db_xref="CDD:438316"
     Site            order(227,229..230,234..235,237,246..247,249,251,259..260,
                     263..264,269..270,272,281..286,288..289,292)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:438316"
     CDS             1..303
                     /gene="STUB1"
                     /coded_by="XM_061152450.1:91..1002"
                     /db_xref="GeneID:133063294"
ORIGIN      
        1 mkgkeekegg arlgagggsp ekspsaqelk eqgnrlfvgr kypeaaacyg raitrnplva
       61 vyytnralcy lkmqqheqal adcrraleld gqsvkahffl gqcqlemesy deaianlqra
      121 ynlakeqrln fgddipsalr iakkkrwnsi eerrihqene lhsyltrliv aerereleec
      181 qrnhegdedd shiraqqaci eakhdkylad mdelfsqvde krkkrdipdy lcgkisfelm
      241 repcitpsgi tydrkdieeh lqrvghfdpv trspltqeql ipnlamkevi dafisengwv
      301 edy
//
LOCUS       XP_061008434             269 aa            linear   MAM 02-DEC-2023
DEFINITION  jmjC domain-containing protein 8 isoform X1 [Dama dama].
ACCESSION   XP_061008434
VERSION     XP_061008434.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152451.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..269
                     /product="jmjC domain-containing protein 8 isoform X1"
                     /calculated_mol_wt=30426
     Region          59..253
                     /region_name="Cupin_8"
                     /note="Cupin-like domain; pfam13621"
                     /db_xref="CDD:463936"
     CDS             1..269
                     /gene="JMJD8"
                     /coded_by="XM_061152451.1:90..899"
                     /db_xref="GeneID:133063295"
ORIGIN      
        1 malgarpllw lalwtlavpa rssredadgg wrrpgpgapa avteeehctv erradlsyae
       61 fvqryafsrp vilrgltdns rfrdlctrqk llasfgdsvv rlstantysy qkvdlpfqky
      121 veqmlhpqdp ismgndtlyf fgdnnftewa slfqhysppp fsllgttpay sfgiagagsg
      181 vpfhwhgpgf seviygrkrw flyppektpe fhpnkttlaw lrdtypaltp strplectiq
      241 agemlyfpdr wwhatlnldt svfistfls
//
LOCUS       XP_061008436             263 aa            linear   MAM 02-DEC-2023
DEFINITION  jmjC domain-containing protein 8 isoform X2 [Dama dama].
ACCESSION   XP_061008436
VERSION     XP_061008436.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152453.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..263
                     /product="jmjC domain-containing protein 8 isoform X2"
                     /calculated_mol_wt=29709
     Region          59..247
                     /region_name="Cupin_8"
                     /note="Cupin-like domain; pfam13621"
                     /db_xref="CDD:463936"
     CDS             1..263
                     /gene="JMJD8"
                     /coded_by="XM_061152453.1:91..882"
                     /db_xref="GeneID:133063295"
ORIGIN      
        1 malgarpllw lalwtlavpa rssredadgg wrrpgpgapa avteeehctv erradlsyae
       61 fvqryafsrp vilrgltdns rfrdlctrqk llasfgdsvv rlstantysy qkvdlpfqky
      121 veqmlhpqdp ismgndtlyf fgdnnftewa slfqhysppp fsllgttpay sfgiagagsg
      181 vpfhwhgpgf serwflyppe ktpefhpnkt tlawlrdtyp altpstrple ctiqagemly
      241 fpdrwwhatl nldtsvfist fls
//
LOCUS       XP_061008437             236 aa            linear   MAM 02-DEC-2023
DEFINITION  jmjC domain-containing protein 8 isoform X3 [Dama dama].
ACCESSION   XP_061008437
VERSION     XP_061008437.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152454.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..236
                     /product="jmjC domain-containing protein 8 isoform X3"
                     /calculated_mol_wt=26661
     Region          35..220
                     /region_name="Cupin_8"
                     /note="Cupin-like domain; pfam13621"
                     /db_xref="CDD:463936"
     CDS             1..236
                     /gene="JMJD8"
                     /coded_by="XM_061152454.1:90..800"
                     /db_xref="GeneID:133063295"
ORIGIN      
        1 malgarpllw lalwtlavpa rssredadgg cyafsrpvil rgltdnsrfr dlctrqklla
       61 sfgdsvvrls tantysyqkv dlpfqkyveq mlhpqdpism gndtlyffgd nnftewaslf
      121 qhyspppfsl lgttpaysfg iagagsgvpf hwhgpgfsev iygrkrwfly ppektpefhp
      181 nkttlawlrd typaltpstr plectiqage mlyfpdrwwh atlnldtsvf istfls
//
LOCUS       XP_061008438             229 aa            linear   MAM 02-DEC-2023
DEFINITION  jmjC domain-containing protein 8 isoform X4 [Dama dama].
ACCESSION   XP_061008438
VERSION     XP_061008438.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152455.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..229
                     /product="jmjC domain-containing protein 8 isoform X4"
                     /calculated_mol_wt=25923
     Region          <110..213
                     /region_name="Cupin_8"
                     /note="Cupin-like domain; pfam13621"
                     /db_xref="CDD:463936"
     CDS             1..229
                     /gene="JMJD8"
                     /coded_by="XM_061152455.1:91..780"
                     /db_xref="GeneID:133063295"
ORIGIN      
        1 malgarpllw lalwtlavpa rssredadgg wrrpgpgapa avteeehctv erradlsyae
       61 fvqryafsrp vilrgltdns rfrdlctrqk llasfgdsvv rlstantysy qkvdlpfqky
      121 veqmlhpqdp ismgngagsg vpfhwhgpgf seviygrkrw flyppektpe fhpnkttlaw
      181 lrdtypaltp strplectiq agemlyfpdr wwhatlnldt svfistfls
//
LOCUS       XP_061008439             223 aa            linear   MAM 02-DEC-2023
DEFINITION  jmjC domain-containing protein 8 isoform X5 [Dama dama].
ACCESSION   XP_061008439
VERSION     XP_061008439.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152456.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..223
                     /product="jmjC domain-containing protein 8 isoform X5"
                     /calculated_mol_wt=25206
     Region          <110..207
                     /region_name="Cupin_8"
                     /note="Cupin-like domain; pfam13621"
                     /db_xref="CDD:463936"
     CDS             1..223
                     /gene="JMJD8"
                     /coded_by="XM_061152456.1:92..763"
                     /db_xref="GeneID:133063295"
ORIGIN      
        1 malgarpllw lalwtlavpa rssredadgg wrrpgpgapa avteeehctv erradlsyae
       61 fvqryafsrp vilrgltdns rfrdlctrqk llasfgdsvv rlstantysy qkvdlpfqky
      121 veqmlhpqdp ismgngagsg vpfhwhgpgf serwflyppe ktpefhpnkt tlawlrdtyp
      181 altpstrple ctiqagemly fpdrwwhatl nldtsvfist fls
//
LOCUS       XP_061008440             482 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 78 [Dama dama].
ACCESSION   XP_061008440
VERSION     XP_061008440.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152457.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..482
                     /product="coiled-coil domain-containing protein 78"
                     /calculated_mol_wt=52906
     Region          50..155
                     /region_name="DUF4472"
                     /note="Domain of unknown function (DUF4472); pfam14739"
                     /db_xref="CDD:464291"
     Region          163..>442
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..482
                     /gene="CCDC78"
                     /coded_by="XM_061152457.1:34..1482"
                     /db_xref="GeneID:133063296"
ORIGIN      
        1 mehvaapgpp pratenvlpr aeawlpgvpg gapgwatnlg telpsdlels eeqqlqvcke
       61 lvdlqiknqr lqeqhdaeif elksevlwle srvlelelqg araapaeadp grrpalaqel
      121 ghkaggqgqs ysrrlqaqst dfltpknkqq dlgdgtgvqp pspklpaeak qaqehhrarq
      181 kalethmaal grqlqgawee artagqrlaa qavvlsacrg qlhqaeaena rlqlqlkkln
      241 eayairlqhc artvagyadg agpkptaaal rtflettled iraahhsreq qlaraarsyr
      301 kcladlsrrh eelliahsvq qmlvdpvgap gtpraafgaa psdvallplh tvtefshwte
      361 dqamlekqlq klkaqkgsse vsqggtlepq gleaaswaqi rqnlqefarg tqaelerera
      421 qllvratmae eqlselqeyv dqhlgrykqe ilrlrklvgt gdpwkvgaip sdkpqhprtc
      481 sh
//
LOCUS       XP_061008441             226 aa            linear   MAM 02-DEC-2023
DEFINITION  adenine nucleotide translocase lysine N-methyltransferase isoform
            X1 [Dama dama].
ACCESSION   XP_061008441
VERSION     XP_061008441.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152458.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..226
                     /product="adenine nucleotide translocase lysine
                     N-methyltransferase isoform X1"
                     /calculated_mol_wt=24142
     Region          66..>163
                     /region_name="UbiE"
                     /note="Ubiquinone/menaquinone biosynthesis C-methylase
                     UbiE/MenG [Coenzyme transport and metabolism]; COG2226"
                     /db_xref="CDD:441828"
     CDS             1..226
                     /gene="ANTKMT"
                     /coded_by="XM_061152458.1:177..857"
                     /db_xref="GeneID:133063297"
ORIGIN      
        1 meqddpaeal telrerqpsp lellqvaags glavygvwal llqpgfrrvp lrlqvpyvga
       61 sarqvehvls llrgrpgktv dlgsgdgriv laahrcglrp avgyelnpwl vglarlrawr
      121 agcvgsvrfh redlwkvslr dchnvsvfla psvlplledk lqaelpagar vvsgrfplpt
      181 wqpvavvgeg ldrvwaydih rggpagqavp gpgsasvlgt pnsqtg
//
LOCUS       XP_061008442             217 aa            linear   MAM 02-DEC-2023
DEFINITION  adenine nucleotide translocase lysine N-methyltransferase isoform
            X2 [Dama dama].
ACCESSION   XP_061008442
VERSION     XP_061008442.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152459.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..217
                     /product="adenine nucleotide translocase lysine
                     N-methyltransferase isoform X2"
                     /calculated_mol_wt=22664
     Region          74..>147
                     /region_name="UbiE"
                     /note="Ubiquinone/menaquinone biosynthesis C-methylase
                     UbiE/MenG [Coenzyme transport and metabolism]; COG2226"
                     /db_xref="CDD:441828"
     CDS             1..217
                     /gene="ANTKMT"
                     /coded_by="XM_061152459.1:939..1592"
                     /db_xref="GeneID:133063297"
ORIGIN      
        1 mhtsssresv gfatssggae ragvgvvnrt kgaprcsgrs qeglgqelha cspgsgqret
       61 vwvpyvgasa rqvehvlsll rgrpgktvdl gsgdgrivla ahrcglrpav gyelnpwlvg
      121 larlrawrag cvgsvrfhre dlwklplled klqaelpaga rvvsgrfplp twqpvavvge
      181 gldrvwaydi hrggpagqav pgpgsasvlg tpnsqtg
//
LOCUS       XP_061008443             209 aa            linear   MAM 02-DEC-2023
DEFINITION  adenine nucleotide translocase lysine N-methyltransferase isoform
            X3 [Dama dama].
ACCESSION   XP_061008443
VERSION     XP_061008443.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152460.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..209
                     /product="adenine nucleotide translocase lysine
                     N-methyltransferase isoform X3"
                     /calculated_mol_wt=22317
     Region          66..>139
                     /region_name="UbiE"
                     /note="Ubiquinone/menaquinone biosynthesis C-methylase
                     UbiE/MenG [Coenzyme transport and metabolism]; COG2226"
                     /db_xref="CDD:441828"
     CDS             1..209
                     /gene="ANTKMT"
                     /coded_by="XM_061152460.1:177..806"
                     /db_xref="GeneID:133063297"
ORIGIN      
        1 meqddpaeal telrerqpsp lellqvaags glavygvwal llqpgfrrvp lrlqvpyvga
       61 sarqvehvls llrgrpgktv dlgsgdgriv laahrcglrp avgyelnpwl vglarlrawr
      121 agcvgsvrfh redlwklpll edklqaelpa garvvsgrfp lptwqpvavv gegldrvway
      181 dihrggpagq avpgpgsasv lgtpnsqtg
//
LOCUS       XP_061008445             476 aa            linear   MAM 02-DEC-2023
DEFINITION  cytosolic iron-sulfur assembly component 3 isoform X1 [Dama dama].
ACCESSION   XP_061008445
VERSION     XP_061008445.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152462.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..476
                     /product="cytosolic iron-sulfur assembly component 3
                     isoform X1"
                     /calculated_mol_wt=52487
     Region          110..403
                     /region_name="Fe_hyd_lg_C"
                     /note="Iron only hydrogenase large subunit, C-terminal
                     domain; pfam02906"
                     /db_xref="CDD:397172"
     Region          418..466
                     /region_name="Fe_hyd_SSU"
                     /note="Iron hydrogenase small subunit; smart00902"
                     /db_xref="CDD:214899"
     CDS             1..476
                     /gene="CIAO3"
                     /coded_by="XM_061152462.1:63..1493"
                     /db_xref="GeneID:133063298"
ORIGIN      
        1 maspfsgalq ltdlddfiap sqdcikpmkv dkrsgsgvak ihieddgsyf qvsqdggmkk
       61 lekakisldd clacsgcvts aetvlitqqs heelrkvlga nktaapdqqk lvvisvspqs
      121 raslavrfql nptdtarklt affkkigahy vfdtafsrnf sllesqrefv wrfrgqanpk
      181 qalpvltsac pgwicyaekt hgstllphis tarspqqvmg slvkdffaqq qrltpdkvyh
      241 atvmpcydkk leasrpdffs qehqtrdvdc vittgevfkl leeegvslse lepapldslc
      301 ssasaqepts hrgggsggyl ehvfrhaaqe lfgihvtevt yrplrnkdlq evilerdgqv
      361 llhfaaaygf rniqnlvqkl krgrcpyhfv evmacpagcl ngggqlkapd mpgkellqqv
      421 erlyglvrte apedapgvqe lyerwlqgag seragrllht syravekags glsirw
//
LOCUS       XP_061008446             470 aa            linear   MAM 02-DEC-2023
DEFINITION  cytosolic iron-sulfur assembly component 3 isoform X2 [Dama dama].
ACCESSION   XP_061008446
VERSION     XP_061008446.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152463.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..470
                     /product="cytosolic iron-sulfur assembly component 3
                     isoform X2"
                     /calculated_mol_wt=51776
     Region          110..397
                     /region_name="Fe_hyd_lg_C"
                     /note="Iron only hydrogenase large subunit, C-terminal
                     domain; pfam02906"
                     /db_xref="CDD:397172"
     Region          412..460
                     /region_name="Fe_hyd_SSU"
                     /note="Iron hydrogenase small subunit; smart00902"
                     /db_xref="CDD:214899"
     CDS             1..470
                     /gene="CIAO3"
                     /coded_by="XM_061152463.1:23..1435"
                     /db_xref="GeneID:133063298"
ORIGIN      
        1 maspfsgalq ltdlddfiap sqdcikpmkv dkrsgsgvak ihieddgsyf qvsqdggmkk
       61 lekakisldd clacsgcvts aetvlitqqs heelrkvlga nktaapdqqk lvvisvspqs
      121 raslavrfql nptdtarklt affkkigahy vfdtafsrnf sllesqrefv wrfrgqanpk
      181 qalpvltsac pgwicyaekt hgstllphis tarspqqvmg slvkdffaqq qvyhatvmpc
      241 ydkkleasrp dffsqehqtr dvdcvittge vfklleeegv slselepapl dslcssasaq
      301 eptshrgggs ggylehvfrh aaqelfgihv tevtyrplrn kdlqeviler dgqvllhfaa
      361 aygfrniqnl vqklkrgrcp yhfvevmacp agclngggql kapdmpgkel lqqverlygl
      421 vrteapedap gvqelyerwl qgagseragr llhtsyrave kagsglsirw
//
LOCUS       XP_061008447             283 aa            linear   MAM 02-DEC-2023
DEFINITION  hydroxyacylglutathione hydrolase-like protein isoform X1 [Dama
            dama].
ACCESSION   XP_061008447
VERSION     XP_061008447.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152464.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..283
                     /product="hydroxyacylglutathione hydrolase-like protein
                     isoform X1"
                     /calculated_mol_wt=31422
     Region          1..245
                     /region_name="PLN02469"
                     /note="hydroxyacylglutathione hydrolase"
                     /db_xref="CDD:178088"
     CDS             1..283
                     /gene="HAGHL"
                     /coded_by="XM_061152464.1:213..1064"
                     /db_xref="GeneID:133063299"
ORIGIN      
        1 mkvkvipvle dnymylviee rtreavavdv avpkrlleiv gregvslttv ltthhhwdha
       61 rgnaelvrll pglvvlgade ricaltrrla hgeelrfgai hvrclltpgh tlghmsyflw
      121 eeecpdppav fsgdalsmag cgsrlegtaq qmyqslvetl gtlppetkvf cghehtlgnl
      181 efaqkvepyn dhvkaklswa kqrdeddvpt vpatlgeell ynpflrvaee pvreftgkva
      241 padvldvlcr erasferaae plqpqarall alqwgllstp rqk
//
LOCUS       XP_061008448             283 aa            linear   MAM 02-DEC-2023
DEFINITION  hydroxyacylglutathione hydrolase-like protein isoform X1 [Dama
            dama].
ACCESSION   XP_061008448
VERSION     XP_061008448.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152465.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..283
                     /product="hydroxyacylglutathione hydrolase-like protein
                     isoform X1"
                     /calculated_mol_wt=31422
     Region          1..245
                     /region_name="PLN02469"
                     /note="hydroxyacylglutathione hydrolase"
                     /db_xref="CDD:178088"
     CDS             1..283
                     /gene="HAGHL"
                     /coded_by="XM_061152465.1:248..1099"
                     /db_xref="GeneID:133063299"
ORIGIN      
        1 mkvkvipvle dnymylviee rtreavavdv avpkrlleiv gregvslttv ltthhhwdha
       61 rgnaelvrll pglvvlgade ricaltrrla hgeelrfgai hvrclltpgh tlghmsyflw
      121 eeecpdppav fsgdalsmag cgsrlegtaq qmyqslvetl gtlppetkvf cghehtlgnl
      181 efaqkvepyn dhvkaklswa kqrdeddvpt vpatlgeell ynpflrvaee pvreftgkva
      241 padvldvlcr erasferaae plqpqarall alqwgllstp rqk
//
LOCUS       XP_061008449             282 aa            linear   MAM 02-DEC-2023
DEFINITION  hydroxyacylglutathione hydrolase-like protein isoform X2 [Dama
            dama].
ACCESSION   XP_061008449
VERSION     XP_061008449.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152466.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..282
                     /product="hydroxyacylglutathione hydrolase-like protein
                     isoform X2"
                     /calculated_mol_wt=31294
     Region          1..244
                     /region_name="PLN02469"
                     /note="hydroxyacylglutathione hydrolase"
                     /db_xref="CDD:178088"
     CDS             1..282
                     /gene="HAGHL"
                     /coded_by="XM_061152466.1:213..1061"
                     /db_xref="GeneID:133063299"
ORIGIN      
        1 mkvkvipvle dnymylviee rtreavavdv avpkrlleiv gregvslttv ltthhhwdha
       61 rgnaelvrll pglvvlgade ricaltrrla hgeelrfgai hvrclltpgh tlghmsyflw
      121 eeecpdppav fsgdalsmag cgsrlegtaq qmyqslvetl gtlppetkvf cghehtlgnl
      181 efaqkvepyn dhvkaklswa krdeddvptv patlgeelly npflrvaeep vreftgkvap
      241 advldvlcre rasferaaep lqpqaralla lqwgllstpr qk
//
LOCUS       XP_061008450             282 aa            linear   MAM 02-DEC-2023
DEFINITION  hydroxyacylglutathione hydrolase-like protein isoform X3 [Dama
            dama].
ACCESSION   XP_061008450
VERSION     XP_061008450.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152467.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..282
                     /product="hydroxyacylglutathione hydrolase-like protein
                     isoform X3"
                     /calculated_mol_wt=31294
     Region          1..244
                     /region_name="PLN02469"
                     /note="hydroxyacylglutathione hydrolase"
                     /db_xref="CDD:178088"
     CDS             1..282
                     /gene="HAGHL"
                     /coded_by="XM_061152467.1:213..1061"
                     /db_xref="GeneID:133063299"
ORIGIN      
        1 mkvkvipvle dnymylviee rtreavavdv avpkrlleiv gregvslttv ltthhhwdha
       61 rgnaelvrll pglvvlgade ricaltrrla hgeelrfgai hvrclltpgh tlghmsyflw
      121 eeecpdppav fsgdalsmag cgsrlegtaq qmyqslvetl gtlppetvfc ghehtlgnle
      181 faqkvepynd hvkaklswak qrdeddvptv patlgeelly npflrvaeep vreftgkvap
      241 advldvlcre rasferaaep lqpqaralla lqwgllstpr qk
//
LOCUS       XP_061008451             261 aa            linear   MAM 02-DEC-2023
DEFINITION  hydroxyacylglutathione hydrolase-like protein isoform X4 [Dama
            dama].
ACCESSION   XP_061008451
VERSION     XP_061008451.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152468.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..261
                     /product="hydroxyacylglutathione hydrolase-like protein
                     isoform X4"
                     /calculated_mol_wt=28996
     Region          1..227
                     /region_name="PLN02469"
                     /note="hydroxyacylglutathione hydrolase"
                     /db_xref="CDD:178088"
     CDS             1..261
                     /gene="HAGHL"
                     /coded_by="XM_061152468.1:213..998"
                     /db_xref="GeneID:133063299"
ORIGIN      
        1 mkvkvipvle dnymylviee rtreavavdv avpkrlleiv gregvslttv ltthhhwdha
       61 rgnaelvrll pglvvlgade ricaltrrla hgeelrfgai hvrclltpgh tlghmsyflw
      121 eeecpdppav fsgdalsmag cgsrlegtaq qmyqslvetl gtlppetkvf cghehtlgnl
      181 efaqkvepyn dhvkaklswa kqrdeddvpt vpatlgeell ynpflrvaer asferaaepl
      241 qpqarallal qwgllstprq k
//
LOCUS       XP_061008452             258 aa            linear   MAM 02-DEC-2023
DEFINITION  hydroxyacylglutathione hydrolase-like protein isoform X5 [Dama
            dama].
ACCESSION   XP_061008452
VERSION     XP_061008452.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152469.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..258
                     /product="hydroxyacylglutathione hydrolase-like protein
                     isoform X5"
                     /calculated_mol_wt=28473
     Region          4..>132
                     /region_name="hydroxyacylglutathione_hydrolase_MBL-fold"
                     /note="hydroxyacylglutathione hydrolase, MBL-fold
                     metallo-hydrolase domain; cd07723"
                     /db_xref="CDD:293809"
     Region          <176..230
                     /region_name="HAGH_C"
                     /note="Hydroxyacylglutathione hydrolase C-terminus;
                     pfam16123"
                     /db_xref="CDD:465030"
     CDS             1..258
                     /gene="HAGHL"
                     /coded_by="XM_061152469.1:213..989"
                     /db_xref="GeneID:133063299"
ORIGIN      
        1 mkvkvipvle dnymylviee rtreavavdv avpkrlleiv gregvslttv ltthhhwdha
       61 rgnaelvrll pglvvlgade ricaltrrla hgeelrfgai hvrclltpgh tlghmsyflw
      121 eeecpdppav fsegvlwsra htgqprvcte sgalqrpreg qavmgqgvaa pplsgkqrde
      181 ddvptvpatl geellynpfl rvaeepvref tgkvapadvl dvlcrerasf eraaeplqpq
      241 arallalqwg llstprqk
//
LOCUS       XP_061008453             234 aa            linear   MAM 02-DEC-2023
DEFINITION  hydroxyacylglutathione hydrolase-like protein isoform X6 [Dama
            dama].
ACCESSION   XP_061008453
VERSION     XP_061008453.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152470.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..234
                     /product="hydroxyacylglutathione hydrolase-like protein
                     isoform X6"
                     /calculated_mol_wt=26040
     Region          1..>201
                     /region_name="PLN02469"
                     /note="hydroxyacylglutathione hydrolase"
                     /db_xref="CDD:178088"
     CDS             1..234
                     /gene="HAGHL"
                     /coded_by="XM_061152470.1:213..917"
                     /db_xref="GeneID:133063299"
ORIGIN      
        1 mkvkvipvle dnymylviee rtreavavdv avpkrlleiv gregvslttv ltthhhwdha
       61 rgnaelvrll pglvvlgade ricaltrrla hgeelrfgai hvrclltpgh tlghmsyflw
      121 eeecpdppav fsgdalsmag cgsrlegtaq qmyqslvetl gtlppetkvf cghehtlgnl
      181 efaqkvepyn dhvkaklswa kvwpllhsva srgmrmmcpr clqpwarnsf ttps
//
LOCUS       XP_061008454             234 aa            linear   MAM 02-DEC-2023
DEFINITION  hydroxyacylglutathione hydrolase-like protein isoform X6 [Dama
            dama].
ACCESSION   XP_061008454
VERSION     XP_061008454.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152471.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..234
                     /product="hydroxyacylglutathione hydrolase-like protein
                     isoform X6"
                     /calculated_mol_wt=26040
     Region          1..>201
                     /region_name="PLN02469"
                     /note="hydroxyacylglutathione hydrolase"
                     /db_xref="CDD:178088"
     CDS             1..234
                     /gene="HAGHL"
                     /coded_by="XM_061152471.1:213..917"
                     /db_xref="GeneID:133063299"
ORIGIN      
        1 mkvkvipvle dnymylviee rtreavavdv avpkrlleiv gregvslttv ltthhhwdha
       61 rgnaelvrll pglvvlgade ricaltrrla hgeelrfgai hvrclltpgh tlghmsyflw
      121 eeecpdppav fsgdalsmag cgsrlegtaq qmyqslvetl gtlppetkvf cghehtlgnl
      181 efaqkvepyn dhvkaklswa kvwpllhsva srgmrmmcpr clqpwarnsf ttps
//
LOCUS       XP_061008456             978 aa            linear   MAM 02-DEC-2023
DEFINITION  chromosome transmission fidelity protein 18 homolog [Dama dama].
ACCESSION   XP_061008456
VERSION     XP_061008456.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152473.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..978
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..978
                     /product="chromosome transmission fidelity protein 18
                     homolog"
                     /calculated_mol_wt=108368
     Region          348..>595
                     /region_name="PRK04195"
                     /note="replication factor C large subunit; Provisional"
                     /db_xref="CDD:235250"
     CDS             1..978
                     /gene="CHTF18"
                     /coded_by="XM_061152473.1:66..3002"
                     /db_xref="GeneID:133063300"
ORIGIN      
        1 medyerelyg veddfdnqfa aelevlaele gtaalspsrd prptvgrprl tfeeaiagge
       61 taihcspggp prsskgsvrk rqlasdiqgd rylpptpqik rsrlqavrrl nfrseemeem
      121 tppdsptldi tpppspeipd elwgegplda gadagltqas lathnpvlrr ppvledyvnv
      181 tstggdrafl vlradpvgtg vqspfrdtrw rgrgqldllg vpfaslkekv dserrqrlle
      241 eaqrlsdtlc slrsqemeee tqpsgapeee padsqdasqh clwvdefapq rytellsddf
      301 tnrcllkwlk lwdlvvfgqe kparkprpgv eparggkett asskwksheq vleemleael
      361 dpsgrprqkv allcgspglg kttlahviar hagycvvemn asddrspeaf rsrieaatqm
      421 esvlgaggrp nclvideidg aptaainvll svldrkgpqq aepggpsvlt gggrrrraeg
      481 gllmrpiici cndpfvpslr qlkqqalllh fpptlpsrlt qrlqeislrr gmradpgala
      541 alcektdndi racinalqfl hrrgqrelsi qaiqsthigl kdqrkglfsv wqevfqlpra
      601 qrrrmgqdpt lpthmlllgd rlsgsgplaa eipltaaaqr fyhilhiaas agehdkvvqg
      661 lfdnflrlrl rdsslgavct aldwlafddl lgraalhsqs fqlmrylpfl lpafhllfas
      721 shvpriafps sqqeaqnrmn qtqnliqtlv sgitpatrsr aapqalildt lcllldiltp
      781 klrpvstqly sarekqqlas lvgtmlaysl tyrqdrtpdg qyvyrlepnv eevcrfpelp
      841 vrkpltyqak qliareveve kmrrveasar ardgpqvdgg plggtgekev qppapcdhkq
      901 rlecilkraa leeqperdff grvvvkraaa qsagheasea dtaerrvgta vgrsdvwfrf
      961 kegvsnavrr slyirdll
//
LOCUS       XP_061008457             147 aa            linear   MAM 02-DEC-2023
DEFINITION  guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-13
            isoform X1 [Dama dama].
ACCESSION   XP_061008457
VERSION     XP_061008457.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152474.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..147
                     /product="guanine nucleotide-binding protein
                     G(I)/G(S)/G(O) subunit gamma-13 isoform X1"
                     /calculated_mol_wt=15651
     Region          86..142
                     /region_name="GGL"
                     /note="G protein gamma subunit-like motifs, the
                     alpha-helical G-gamma chain dimerizes with the G-beta
                     propeller subunit as part of the heterotrimeric G-protein
                     complex; involved in signal transduction via
                     G-protein-coupled receptors; cd00068"
                     /db_xref="CDD:238024"
     Site            order(86,89,93,96,100,105,107,110..111,114..115,118,
                     127..128,138)
                     /site_type="other"
                     /note="beta subunit binding site [polypeptide binding]"
                     /db_xref="CDD:238024"
     CDS             1..147
                     /gene="GNG13"
                     /coded_by="XM_061152474.1:591..1034"
                     /db_xref="GeneID:133063301"
ORIGIN      
        1 mkpapqgqps peeggqrvga vpgpgpgggm ggapaqalpa carlarpslr prhpvavlis
       61 vlavtvqgsp rlatseapda meewdvpqmk keveslkyql afkremsskt ipellkwiee
      121 gipkdpflnp dlmknnpwve kgkctil
//
LOCUS       XP_061008458              67 aa            linear   MAM 02-DEC-2023
DEFINITION  guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-13
            isoform X2 [Dama dama].
ACCESSION   XP_061008458
VERSION     XP_061008458.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152475.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..67
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..67
                     /product="guanine nucleotide-binding protein
                     G(I)/G(S)/G(O) subunit gamma-13 isoform X2"
                     /calculated_mol_wt=7848
     Region          6..62
                     /region_name="GGL"
                     /note="G protein gamma subunit-like motifs, the
                     alpha-helical G-gamma chain dimerizes with the G-beta
                     propeller subunit as part of the heterotrimeric G-protein
                     complex; involved in signal transduction via
                     G-protein-coupled receptors; cd00068"
                     /db_xref="CDD:238024"
     Site            order(6,9,13,16,20,25,27,30..31,34..35,38,47..48,58)
                     /site_type="other"
                     /note="beta subunit binding site [polypeptide binding]"
                     /db_xref="CDD:238024"
     CDS             1..67
                     /gene="GNG13"
                     /coded_by="XM_061152475.1:108..311"
                     /db_xref="GeneID:133063301"
ORIGIN      
        1 meewdvpqmk keveslkyql afkremsskt ipellkwiee gipkdpflnp dlmknnpwve
       61 kgkctil
//
LOCUS       XP_061008459              67 aa            linear   MAM 02-DEC-2023
DEFINITION  guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-13
            isoform X2 [Dama dama].
ACCESSION   XP_061008459
VERSION     XP_061008459.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152476.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..67
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..67
                     /product="guanine nucleotide-binding protein
                     G(I)/G(S)/G(O) subunit gamma-13 isoform X2"
                     /calculated_mol_wt=7848
     Region          6..62
                     /region_name="GGL"
                     /note="G protein gamma subunit-like motifs, the
                     alpha-helical G-gamma chain dimerizes with the G-beta
                     propeller subunit as part of the heterotrimeric G-protein
                     complex; involved in signal transduction via
                     G-protein-coupled receptors; cd00068"
                     /db_xref="CDD:238024"
     Site            order(6,9,13,16,20,25,27,30..31,34..35,38,47..48,58)
                     /site_type="other"
                     /note="beta subunit binding site [polypeptide binding]"
                     /db_xref="CDD:238024"
     CDS             1..67
                     /gene="GNG13"
                     /coded_by="XM_061152476.1:49..252"
                     /db_xref="GeneID:133063301"
ORIGIN      
        1 meewdvpqmk keveslkyql afkremsskt ipellkwiee gipkdpflnp dlmknnpwve
       61 kgkctil
//
LOCUS       XP_061008460             471 aa            linear   MAM 02-DEC-2023
DEFINITION  lipase maturation factor 1 isoform X1 [Dama dama].
ACCESSION   XP_061008460
VERSION     XP_061008460.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152477.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..471
                     /product="lipase maturation factor 1 isoform X1"
                     /calculated_mol_wt=53226
     Region          73..449
                     /region_name="LMF1"
                     /note="Lipase maturation factor; pfam06762"
                     /db_xref="CDD:462004"
     CDS             1..471
                     /gene="LMF1"
                     /coded_by="XM_061152477.1:16..1431"
                     /db_xref="GeneID:133063302"
ORIGIN      
        1 mpppggawtc iphpqpapph qgcwdrgllc aqhltpgarl srpwpprgwl hpawaagsat
       61 gapgscysra lcssgwesql letgflgifl cplwtlsalp rgtptsrviv wgfrwlifri
      121 mlgaglikir gdrcwrdltc mdfhyetqpv pnpvayflhr spwwfhrfet lsnhflellv
      181 pffvflgrrm civhgalqvl fqvvliisgn lsflnwltiv pslacfddat lgglfpsgpg
      241 rlkdqvlkiq eeeargagap rtrgcvarst vnlvlgilva wlsipvvlnl lsprqvmnss
      301 fnplrivnty gafgsitrer tevilqgtas anasapdaaw edyefkckpg dlrrrpclis
      361 pyhhrldwlm wfaafqtyeh newiihlagk llandaqals llahnpfegr apprwvrgeh
      421 yrykfsrpgg rhaaegkwwi rrrlgpyfpp lnlqdlrgyf tsrewpypep e
//
LOCUS       XP_061008461             569 aa            linear   MAM 02-DEC-2023
DEFINITION  lipase maturation factor 1 isoform X2 [Dama dama].
ACCESSION   XP_061008461
VERSION     XP_061008461.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152478.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..569
                     /product="lipase maturation factor 1 isoform X2"
                     /calculated_mol_wt=64566
     Region          169..547
                     /region_name="LMF1"
                     /note="Lipase maturation factor; pfam06762"
                     /db_xref="CDD:462004"
     CDS             1..569
                     /gene="LMF1"
                     /coded_by="XM_061152478.1:1..1710"
                     /db_xref="GeneID:133063302"
ORIGIN      
        1 mrhagpamaa pgeslrrrka gagdpepeap pgqerdlkgr parlrvgtfw ltrivllral
       61 afvyfvaflv afhqnkqlig drgllpcrly lqsvqrhfgg rvswdalsya ptilwlldws
      121 qmdanldala llglgissfi lvsgcanmvl mtalwvlyms lvnvgqiwys fgwesqllet
      181 gflgiflcpl wtlsalprgt ptsrvivwgf rwlifrimlg aglikirgdr cwrdltcmdf
      241 hyetqpvpnp vayflhrspw wfhrfetlsn hflellvpff vflgrrmciv hgalqvlfqv
      301 vliisgnlsf lnwltivpsl acfddatlgg lfpsgpgrlk dqvlkiqeee argagaprtr
      361 agcvarstvn lvlgilvawl sipvvlnlls prqvmnssfn plrivntyga fgsitrerte
      421 vilqgtasan asapdaawed yefkckpgdl rrrpclispy hhrldwlmwf aafqtyehne
      481 wiihlagkll andaqalsll ahnpfegrap prwvrgehyr ykfsrpggrh aaegkwwirr
      541 rlgpyfppln lqdlrgyfts rewpypepe
//
LOCUS       XP_061008462             158 aa            linear   MAM 02-DEC-2023
DEFINITION  SUMO-conjugating enzyme UBC9 [Dama dama].
ACCESSION   XP_061008462
VERSION     XP_061008462.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152479.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..158
                     /product="SUMO-conjugating enzyme UBC9"
                     /calculated_mol_wt=17876
     Region          4..155
                     /region_name="UBCc_UBE2I"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain of ubiquitin-conjugating enzyme E2 I and related
                     proteins; cd23798"
                     /db_xref="CDD:467418"
     CDS             1..158
                     /gene="UBE2I"
                     /coded_by="XM_061152479.1:140..616"
                     /db_xref="GeneID:133063304"
ORIGIN      
        1 msgialsrla qerkawrkdh pfgfvavptk npdgtmnlmn wecaipgkkg tpwegglfkl
       61 rmlfkddyps sppkckfepp lfhpnvypsg tvclsileed kdwrpaitik qillgiqell
      121 nepniqdpaq aeaytiycqn rveyekrvra qakkfaps
//
LOCUS       XP_061008464            1152 aa            linear   MAM 02-DEC-2023
DEFINITION  BAI1-associated protein 3 [Dama dama].
ACCESSION   XP_061008464
VERSION     XP_061008464.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152481.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1152
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1152
                     /product="BAI1-associated protein 3"
                     /calculated_mol_wt=128515
     Region          133..332
                     /region_name="C2A_Munc13-like"
                     /note="C2 domain first repeat in Munc13 (mammalian
                     uncoordinated)-like proteins; cd08676"
                     /db_xref="CDD:176058"
     Site            order(176,182,260,262)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176058"
     Region          975..1109
                     /region_name="C2B_Munc13-like"
                     /note="C2 domain second repeat in Munc13 (mammalian
                     uncoordinated)-like proteins; cd04009"
                     /db_xref="CDD:175976"
     Site            order(1006,1012,1070,1072,1078)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175976"
     CDS             1..1152
                     /gene="BAIAP3"
                     /coded_by="XM_061152481.1:37..3495"
                     /db_xref="GeneID:133063305"
ORIGIN      
        1 mstlleikss vlrqvqvcps frrrteeepa sssadppepa agawkpgdgv effaqmrlil
       61 kkgegrqglp cpevllrsrs papaepvdps rglrtlsqee vdmlyeealy tvlhragtmg
      121 pdqvddeeal lsylqqvfgt speehaaave rvkkakapty alkvsvmrak nllakdpngf
      181 sdpycmlgil pasgavqeps phkeqrfsfr kgskrggplp akciqvtevk nstlnpvwke
      241 hflfeiedvg tdqlhldiwd hdddvslvea crklnevigl kgmsryfkqi vksarangta
      301 gptedhtddf lgclnipvre vpvagedrwf kleprssasr vqgdcqlvlk littqrdtnm
      361 sqrgrsgfls yllllsrllq fehraeepns sswrgelsgp aatvlclhga qnnlsalqla
      421 vlhwqvssrh hqtrtldygy llglledlqa hweeagslpq eqeegladsf safsefglql
      481 lrqlrdyfpa snstavyrle lllkclgklq ifqpsfeicp fetelnmdia aalkrgnrew
      541 fdrllntqsp reqpgpqrlt glvkladavy edlqscygiy aslfhsiikv dfftltfrql
      601 erlvaeeawv lteelspkmt levasglfel yltladiqrf wssipgrdsr slalagihap
      661 flpavklwlq vlrdqtkwrl qgavevdtle pmdasskhss saataslcfs hiqelwacla
      721 wpdpaqaqtl gaqlsqdlce aalfytellr kkvdaqpgaa geavseplcv vlndvellrk
      781 aagqalrgla wpegaagleg tlprpllsct qaldedlqre artvtahlts kmvgdvrkyv
      841 qhvslspdsi qndeavapll kyldeklall naslvkenls rvlealwell lqailqalga
      901 nrdvsadfyg rfhftlealv nffhaegqgl pleslrdgsy krleeelrlh qcstrecieq
      961 yyldklkqrs lehnrfgrls vrchyeaaeq rlavevlhaa dllpldangl sdpfvivelg
     1021 pphlfplvrs qrtqvksrtl hpvydelfyf svpaeacrrr gacvlftvmd hdwlstndfa
     1081 geaalglgsv sgvarpqvgg saragqpvtl hlrrpraqvr salrmlegrp nkeaqefvkr
     1141 lrelekymea dp
//
LOCUS       XP_061008465             315 aa            linear   MAM 02-DEC-2023
DEFINITION  18S rRNA aminocarboxypropyltransferase [Dama dama].
ACCESSION   XP_061008465
VERSION     XP_061008465.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152482.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..315
                     /product="18S rRNA aminocarboxypropyltransferase"
                     /calculated_mol_wt=34303
     Region          60..92
                     /region_name="RLI"
                     /note="Possible Fer4-like domain in RNase L inhibitor,
                     RLI; pfam04068"
                     /db_xref="CDD:427689"
     Region          96..222
                     /region_name="Ribo_biogen_C"
                     /note="Ribosome biogenesis protein, C-terminal; pfam04034"
                     /db_xref="CDD:461139"
     CDS             1..315
                     /gene="TSR3"
                     /coded_by="XM_061152482.1:16..963"
                     /db_xref="GeneID:133063306"
ORIGIN      
        1 mgrrraargp gaeggrarrp agrsleafae evgaalrasv epespedqgg pgpaqlpctl
       61 amwelghcdp rrctgrklar lglvrclrlg hrfgglvlsp vgsqyvspad rhlvaqsgva
      121 vidcswarld etpfgkmrgs hlrllphlva anpvnygrpc rlscveafaa tfcilgfsdl
      181 avillrkfkw gkgfldlnrq lldkyaacsg peevlqaeqe flahakehpe eeeidpfdvd
      241 sgrefanpnr lvtdsrlprd gadrdtedes eelgpdtddg gdsssspeee etaeqgaear
      301 vpteiwkgik krqrd
//
LOCUS       XP_061008466             733 aa            linear   MAM 02-DEC-2023
DEFINITION  putative E3 ubiquitin-protein ligase UNKL isoform X1 [Dama dama].
ACCESSION   XP_061008466
VERSION     XP_061008466.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152483.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..733
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..733
                     /product="putative E3 ubiquitin-protein ligase UNKL
                     isoform X1"
                     /calculated_mol_wt=79200
     Region          25..60
                     /region_name="zf_CCCH_5"
                     /note="Unkempt Zinc finger domain 1 (Znf1); pfam18384"
                     /db_xref="CDD:375810"
     Region          286..312
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     Region          <569..>642
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          691..733
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(693,696,707,709,713,716,723,726)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438428"
     CDS             1..733
                     /gene="UNKL"
                     /coded_by="XM_061152483.1:28..2229"
                     /db_xref="GeneID:133063307"
ORIGIN      
        1 mpsvskaaaa alsgsppqte kpthyrylke frteqcslfv qhkctqhrpf tcfhwhflnq
       61 rrrrplrrrd gtfnyspdvy cskydeasgv cpdgdecpyl hrttgdterk yhlryyktgt
      121 cihetdargh cakngphcaf ahgpldlrpp vcdvrelqaq ealqngqlga gdgvpdlqpg
      181 vlasqalmek ilgedprwqd tnfvlgsykt eqcpkpprlc rqgyacphfh nsrdrrrdpr
      241 rfqyrstpcp svkhgdewge psrcasgdsc aychsrteqq fhpeiykstk cndmrqtghc
      301 prgpfcafah vdteslgmag dwgcrdialt sipatpsgqp ghakqrespa dgsqkaseqd
      361 gkqshlavla vghplapsvs sslasslass tgsggsspta lpalsarthp ldpsgsageg
      421 vpgstldlhl sdislappdk dleehdgrdl gprgqrslgg sapvaipgcl prspslhsss
      481 slsasplgsf sqslpgplis samtppqqpp plksepralg paassynsfg lngvpgsiwd
      541 fvsgsfspsp spilnagpaa ssgvspssae larvrrqlde akrkirqwee swqqvkqacd
      601 awqreakeak eralaadsar qlalqkkeev eaqfrrlqee legrglasal pglrgcgdig
      661 aiplpklhsl qsqlrldlea vdgvifqlra kqcvvcgera gavlrpcqhr vlcepcaasa
      721 pecaycagqp lpw
//
LOCUS       XP_061008467             732 aa            linear   MAM 02-DEC-2023
DEFINITION  putative E3 ubiquitin-protein ligase UNKL isoform X2 [Dama dama].
ACCESSION   XP_061008467
VERSION     XP_061008467.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152484.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..732
                     /product="putative E3 ubiquitin-protein ligase UNKL
                     isoform X2"
                     /calculated_mol_wt=79098
     Region          25..60
                     /region_name="zf_CCCH_5"
                     /note="Unkempt Zinc finger domain 1 (Znf1); pfam18384"
                     /db_xref="CDD:375810"
     Region          286..312
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     Region          <568..>641
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          690..732
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(692,695,706,708,712,715,722,725)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438428"
     CDS             1..732
                     /gene="UNKL"
                     /coded_by="XM_061152484.1:28..2226"
                     /db_xref="GeneID:133063307"
ORIGIN      
        1 mpsvskaaaa alsgsppqte kpthyrylke frteqcslfv qhkctqhrpf tcfhwhflnq
       61 rrrrplrrrd gtfnyspdvy cskydeasgv cpdgdecpyl hrttgdterk yhlryyktgt
      121 cihetdargh cakngphcaf ahgpldlrpp vcdvrelqaq ealqngqlga gdgvpdlqpg
      181 vlasqalmek ilgedprwqd tnfvlgsykt eqcpkpprlc rqgyacphfh nsrdrrrdpr
      241 rfqyrstpcp svkhgdewge psrcasgdsc aychsrteqq fhpeiykstk cndmrqtghc
      301 prgpfcafah vdkslgmagd wgcrdialts ipatpsgqpg hakqrespad gsqkaseqdg
      361 kqshlavlav ghplapsvss slasslasst gsggssptal palsarthpl dpsgsagegv
      421 pgstldlhls dislappdkd leehdgrdlg prgqrslggs apvaipgclp rspslhssss
      481 lsasplgsfs qslpgpliss amtppqqppp lksepralgp aassynsfgl ngvpgsiwdf
      541 vsgsfspsps pilnagpaas sgvspssael arvrrqldea krkirqwees wqqvkqacda
      601 wqreakeake ralaadsarq lalqkkeeve aqfrrlqeel egrglasalp glrgcgdiga
      661 iplpklhslq sqlrldleav dgvifqlrak qcvvcgerag avlrpcqhrv lcepcaasap
      721 ecaycagqpl pw
//
LOCUS       XP_061008468             663 aa            linear   MAM 02-DEC-2023
DEFINITION  putative E3 ubiquitin-protein ligase UNKL isoform X3 [Dama dama].
ACCESSION   XP_061008468
VERSION     XP_061008468.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152485.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..663
                     /product="putative E3 ubiquitin-protein ligase UNKL
                     isoform X3"
                     /calculated_mol_wt=70658
     Region          216..242
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     Region          <499..>572
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          621..663
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(623,626,637,639,643,646,653,656)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438428"
     CDS             1..663
                     /gene="UNKL"
                     /coded_by="XM_061152485.1:59..2050"
                     /db_xref="GeneID:133063307"
ORIGIN      
        1 mpsvskaaaa alsgsppqte kpthyrcpyl hrttgdterk yhlryyktgt cihetdargh
       61 cakngphcaf ahgpldlrpp vcdvrelqaq ealqngqlga gdgvpdlqpg vlasqalmek
      121 ilgedprwqd tnfvlgsykt eqcpkpprlc rqgyacphfh nsrdrrrdpr rfqyrstpcp
      181 svkhgdewge psrcasgdsc aychsrteqq fhpeiykstk cndmrqtghc prgpfcafah
      241 vdteslgmag dwgcrdialt sipatpsgqp ghakqrespa dgsqkaseqd gkqshlavla
      301 vghplapsvs sslasslass tgsggsspta lpalsarthp ldpsgsageg vpgstldlhl
      361 sdislappdk dleehdgrdl gprgqrslgg sapvaipgcl prspslhsss slsasplgsf
      421 sqslpgplis samtppqqpp plksepralg paassynsfg lngvpgsiwd fvsgsfspsp
      481 spilnagpaa ssgvspssae larvrrqlde akrkirqwee swqqvkqacd awqreakeak
      541 eralaadsar qlalqkkeev eaqfrrlqee legrglasal pglrgcgdig aiplpklhsl
      601 qsqlrldlea vdgvifqlra kqcvvcgera gavlrpcqhr vlcepcaasa pecaycagqp
      661 lpw
//
LOCUS       XP_061008469             546 aa            linear   MAM 02-DEC-2023
DEFINITION  putative E3 ubiquitin-protein ligase UNKL isoform X4 [Dama dama].
ACCESSION   XP_061008469
VERSION     XP_061008469.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152486.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..546
                     /product="putative E3 ubiquitin-protein ligase UNKL
                     isoform X4"
                     /calculated_mol_wt=58103
     Region          99..125
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     Region          <382..>455
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          504..546
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(506,509,520,522,526,529,536,539)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438428"
     CDS             1..546
                     /gene="UNKL"
                     /coded_by="XM_061152486.1:459..2099"
                     /db_xref="GeneID:133063307"
ORIGIN      
        1 mekilgedpr wqdtnfvlgs ykteqcpkpp rlcrqgyacp hfhnsrdrrr dprrfqyrst
       61 pcpsvkhgde wgepsrcasg dscaychsrt eqqfhpeiyk stkcndmrqt ghcprgpfca
      121 fahvdteslg magdwgcrdi altsipatps gqpghakqre spadgsqkas eqdgkqshla
      181 vlavghplap svssslassl asstgsggss ptalpalsar thpldpsgsa gegvpgstld
      241 lhlsdislap pdkdleehdg rdlgprgqrs lggsapvaip gclprspslh sssslsaspl
      301 gsfsqslpgp lissamtppq qppplksepr algpaassyn sfglngvpgs iwdfvsgsfs
      361 pspspilnag paassgvsps saelarvrrq ldeakrkirq weeswqqvkq acdawqreak
      421 eakeralaad sarqlalqkk eeveaqfrrl qeelegrgla salpglrgcg digaiplpkl
      481 hslqsqlrld leavdgvifq lrakqcvvcg eragavlrpc qhrvlcepca asapecayca
      541 gqplpw
//
LOCUS       XP_061008470             231 aa            linear   MAM 02-DEC-2023
DEFINITION  putative E3 ubiquitin-protein ligase UNKL isoform X5 [Dama dama].
ACCESSION   XP_061008470
VERSION     XP_061008470.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152487.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..231
                     /product="putative E3 ubiquitin-protein ligase UNKL
                     isoform X5"
                     /calculated_mol_wt=24812
     Region          <67..>140
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          189..231
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(191,194,205,207,211,214,221,224)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438428"
     CDS             1..231
                     /gene="UNKL"
                     /coded_by="XM_061152487.1:310..1005"
                     /db_xref="GeneID:133063307"
ORIGIN      
        1 mtppqqpppl ksepralgpa assynsfgln gvpgsiwdfv sgsfspspsp ilnagpaass
       61 gvspssaela rvrrqldeak rkirqweesw qqvkqacdaw qreakeaker alaadsarql
      121 alqkkeevea qfrrlqeele grglasalpg lrgcgdigai plpklhslqs qlrldleavd
      181 gvifqlrakq cvvcgeraga vlrpcqhrvl cepcaasape caycagqplp w
//
LOCUS       XP_061008471             231 aa            linear   MAM 02-DEC-2023
DEFINITION  putative E3 ubiquitin-protein ligase UNKL isoform X5 [Dama dama].
ACCESSION   XP_061008471
VERSION     XP_061008471.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152488.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..231
                     /product="putative E3 ubiquitin-protein ligase UNKL
                     isoform X5"
                     /calculated_mol_wt=24812
     Region          <67..>140
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          189..231
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(191,194,205,207,211,214,221,224)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438428"
     CDS             1..231
                     /gene="UNKL"
                     /coded_by="XM_061152488.1:531..1226"
                     /db_xref="GeneID:133063307"
ORIGIN      
        1 mtppqqpppl ksepralgpa assynsfgln gvpgsiwdfv sgsfspspsp ilnagpaass
       61 gvspssaela rvrrqldeak rkirqweesw qqvkqacdaw qreakeaker alaadsarql
      121 alqkkeevea qfrrlqeele grglasalpg lrgcgdigai plpklhslqs qlrldleavd
      181 gvifqlrakq cvvcgeraga vlrpcqhrvl cepcaasape caycagqplp w
//
LOCUS       XP_061008473             231 aa            linear   MAM 02-DEC-2023
DEFINITION  putative E3 ubiquitin-protein ligase UNKL isoform X5 [Dama dama].
ACCESSION   XP_061008473
VERSION     XP_061008473.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152490.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..231
                     /product="putative E3 ubiquitin-protein ligase UNKL
                     isoform X5"
                     /calculated_mol_wt=24812
     Region          <67..>140
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          189..231
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(191,194,205,207,211,214,221,224)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438428"
     CDS             1..231
                     /gene="UNKL"
                     /coded_by="XM_061152490.1:528..1223"
                     /db_xref="GeneID:133063307"
ORIGIN      
        1 mtppqqpppl ksepralgpa assynsfgln gvpgsiwdfv sgsfspspsp ilnagpaass
       61 gvspssaela rvrrqldeak rkirqweesw qqvkqacdaw qreakeaker alaadsarql
      121 alqkkeevea qfrrlqeele grglasalpg lrgcgdigai plpklhslqs qlrldleavd
      181 gvifqlrakq cvvcgeraga vlrpcqhrvl cepcaasape caycagqplp w
//
LOCUS       XP_061008474             231 aa            linear   MAM 02-DEC-2023
DEFINITION  putative E3 ubiquitin-protein ligase UNKL isoform X5 [Dama dama].
ACCESSION   XP_061008474
VERSION     XP_061008474.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152491.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..231
                     /product="putative E3 ubiquitin-protein ligase UNKL
                     isoform X5"
                     /calculated_mol_wt=24812
     Region          <67..>140
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          189..231
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(191,194,205,207,211,214,221,224)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438428"
     CDS             1..231
                     /gene="UNKL"
                     /coded_by="XM_061152491.1:494..1189"
                     /db_xref="GeneID:133063307"
ORIGIN      
        1 mtppqqpppl ksepralgpa assynsfgln gvpgsiwdfv sgsfspspsp ilnagpaass
       61 gvspssaela rvrrqldeak rkirqweesw qqvkqacdaw qreakeaker alaadsarql
      121 alqkkeevea qfrrlqeele grglasalpg lrgcgdigai plpklhslqs qlrldleavd
      181 gvifqlrakq cvvcgeraga vlrpcqhrvl cepcaasape caycagqplp w
//
LOCUS       XP_061008475             306 aa            linear   MAM 02-DEC-2023
DEFINITION  N-acetylglucosamine-1-phosphotransferase subunit gamma isoform X1
            [Dama dama].
ACCESSION   XP_061008475
VERSION     XP_061008475.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152492.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..306
                     /product="N-acetylglucosamine-1-phosphotransferase subunit
                     gamma isoform X1"
                     /calculated_mol_wt=33671
     Region          69..129
                     /region_name="PRKCSH"
                     /note="Glucosidase II beta subunit-like protein;
                     pfam07915"
                     /db_xref="CDD:400321"
     Region          178..>258
                     /region_name="DMAP_binding"
                     /note="DMAP1-binding Domain; pfam06464"
                     /db_xref="CDD:368923"
     CDS             1..306
                     /gene="GNPTG"
                     /coded_by="XM_061152492.1:18..938"
                     /db_xref="GeneID:133063308"
ORIGIN      
        1 maarlaglav llglgargpa pagaakmkvv eepntfglnn pflpqtsrlq pkrdpspvsg
       61 pahlsrlsgk cfslvestyk yelcpfhnvt qheqtfrwna ysgilgiwhe weitnntfrg
      121 mwmrdgdacq srsrqskvel tcgksnrlah vsepstcvya ltfetplvch phsllvyptl
      181 pavlqqrwdq leqdladeli taqgyekslr aifedagylk tsepsesaqr egatkdlqfe
      241 tlescqeahk alsqeierlq gvlthhgipy gkpaetpsse hwgpqtptag iaeplrgdpg
      301 lrgdtl
//
LOCUS       XP_061008476             257 aa            linear   MAM 02-DEC-2023
DEFINITION  N-acetylglucosamine-1-phosphotransferase subunit gamma isoform X2
            [Dama dama].
ACCESSION   XP_061008476
VERSION     XP_061008476.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152493.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..257
                     /product="N-acetylglucosamine-1-phosphotransferase subunit
                     gamma isoform X2"
                     /calculated_mol_wt=28325
     Region          69..129
                     /region_name="PRKCSH"
                     /note="Glucosidase II beta subunit-like protein;
                     pfam07915"
                     /db_xref="CDD:400321"
     CDS             1..257
                     /gene="GNPTG"
                     /coded_by="XM_061152493.1:18..791"
                     /db_xref="GeneID:133063308"
ORIGIN      
        1 maarlaglav llglgargpa pagaakmkvv eepntfglnn pflpqtsrlq pkrdpspvsg
       61 pahlsrlsgk cfslvestyk yelcpfhnvt qheqtfrwna ysgilgiwhe weitnntfrg
      121 mwmrdgdacq srsrqskrwd qleqdladel itaqgyeksl raifedagyl ktsepsesaq
      181 regatkdlqf etlescqeah kalsqeierl qgvlthhgip ygkpaetpss ehwgpqtpta
      241 giaeplrgdp glrgdtl
//
LOCUS       XP_061008477             135 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquinol-cytochrome c reductase complex assembly factor 4 [Dama
            dama].
ACCESSION   XP_061008477
VERSION     XP_061008477.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152494.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..135
                     /product="ubiquinol-cytochrome c reductase complex
                     assembly factor 4"
                     /calculated_mol_wt=14913
     Region          49..122
                     /region_name="CCSMST1"
                     /note="CCSMST1 family; pfam15013"
                     /db_xref="CDD:464445"
     CDS             1..135
                     /gene="LOC133063309"
                     /coded_by="XM_061152494.1:77..484"
                     /db_xref="GeneID:133063309"
ORIGIN      
        1 msgvlcapaa gafqalrlvr wasrsppppp sgraraqisa egdeeddphr plrfsssraa
       61 plrwtvkqsl gteqqrpwwv vlpfslslma lviwcffrqe tsadrwlrrm lleevpepsd
      121 asedpgvpva hgart
//
LOCUS       XP_061008478             809 aa            linear   MAM 02-DEC-2023
DEFINITION  H(+)/Cl(-) exchange transporter 7 [Dama dama].
ACCESSION   XP_061008478
VERSION     XP_061008478.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152495.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..809
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..809
                     /product="H(+)/Cl(-) exchange transporter 7"
                     /calculated_mol_wt=88604
     Region          99..624
                     /region_name="ClC_6_like"
                     /note="ClC-6-like chloride channel proteins. This CD
                     includes ClC-6, ClC-7 and ClC-B, C, D in plants. Proteins
                     in this family are ubiquitous in eukarotes and their
                     functions are unclear. They are expressed in intracellular
                     organelles membranes. This family...; cd03685"
                     /db_xref="CDD:239657"
     Site            order(207..211,249..253,516..520,606)
                     /site_type="active"
                     /note="putative Cl- selectivity filter [active]"
                     /db_xref="CDD:239657"
     Site            251
                     /site_type="active"
                     /note="putative pore gating glutamate residue [active]"
                     /db_xref="CDD:239657"
     Site            318
                     /site_type="active"
                     /note="putative H+/Cl- coupling transport residue
                     [active]"
                     /db_xref="CDD:239657"
     Region          630..794
                     /region_name="CBS_pair_voltage-gated_CLC_euk_bac"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains associated with the
                     voltage gated CLC (chloride channel) in eukaryotes and
                     bacteria; cd04591"
                     /db_xref="CDD:341367"
     Site            order(636,638..640,664..666,772,785,787,789..790,793)
                     /site_type="other"
                     /note="ligand binding site II [chemical binding]"
                     /db_xref="CDD:341367"
     Region          636..744
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341367"
     Site            order(664,682,686..687,690,750,772..774,789)
                     /site_type="other"
                     /note="putative ligand binding site I [chemical binding]"
                     /db_xref="CDD:341367"
     Region          750..793
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341367"
     CDS             1..809
                     /gene="CLCN7"
                     /coded_by="XM_061152495.1:38..2467"
                     /db_xref="GeneID:133063310"
ORIGIN      
        1 manvskkvsw sgrdldddea apllrraarp gapageaapl lngagpaaar asphsaffri
       61 gqlssveldd elldpdmdpp hpfpreiphn ekllslkyes ldydnsenql fleeerrinh
      121 tafrtveikr wvicamvgil tglvacfidi vveklaglky rlvkdnidrf tergglsfsl
      181 llwavlnaaf vllgsaivaf vepvaagsgi pqikcflngv kiphvvrlkt lvikvsgvil
      241 svvgglavgk egpmihsgsv iaagisqgrs tslkrdfkif eyfrrdtekr dfvsagaaag
      301 vsaafgapvg gvlfsleega sfwnqfltwr iffasmistf tlnfvlsiyh gnawdlsspg
      361 linfgrfdte tmvyviheip ifiamgvvgg ilgavfnaln ywltmfriry vhrpclqvve
      421 atlvaavtat aafvliyssr dcqplrgssv syplqlfcad geynsmaaaf fntpeksvvs
      481 lfhdppgsyn pvtlglftlv yfflacwtyg ltvsagvfip slligaawgr lfgislsyit
      541 gaavwadpgk yalmgaaaql ggivrmtlsl tvimmeatsn vtygfpimlv lmtakivgdv
      601 fieglydmhi qlqsvpflhw eapvtshslt arevmstpvt clrrrekvgv ivdvlsstas
      661 nhngfpvved adgtqparlq glvlrsqliv llkhkvfver ssmgllrrrl rlkdfrdayp
      721 rfppiqsihv sqderectmd lsefmnpspy tvpqeaslpr vfklfralgl rhlvvvdncn
      781 qvvgmvtrkd laryrlgkgg leelslaqt
//
LOCUS       XP_061008479             226 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 204 [Dama dama].
ACCESSION   XP_061008479
VERSION     XP_061008479.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152496.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..226
                     /product="transmembrane protein 204"
                     /calculated_mol_wt=24334
     CDS             1..226
                     /gene="TMEM204"
                     /coded_by="XM_061152496.1:532..1212"
                     /db_xref="GeneID:133063311"
ORIGIN      
        1 mtvrkvvata vlvalvslvl nnaaaftpnw vyqtledgrr rsvglwracw laerprgapg
       61 pgarpgpada rdcealgwgs eaagfqesrg tvklqfdmmr acnlvataal aagqltfvlg
      121 ltglpllspd aqcweeamaa afqlasfvlv iglvtfyrig pytslswscy lnigacllat
      181 laaamliwnv lhrredctap rvivisrslt arfrrgldnd yvespc
//
LOCUS       XP_061008480            1457 aa            linear   MAM 02-DEC-2023
DEFINITION  intraflagellar transport protein 140 homolog isoform X1 [Dama
            dama].
ACCESSION   XP_061008480
VERSION     XP_061008480.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152497.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1457
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1457
                     /product="intraflagellar transport protein 140 homolog
                     isoform X1"
                     /calculated_mol_wt=163616
     Region          6..375
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          18..56
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          64..100
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          107..147
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          152..207
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          215..250
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          327..351
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          381..410
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          798..832
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(800..801,804..805,807,839,842..843,846..847,
                     849..850,892,900..901,904..905,908)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          <829..1072
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          837..886
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          891..921
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          949..998
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          968..>1222
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          1005..1031
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..1457
                     /gene="IFT140"
                     /coded_by="XM_061152497.1:156..4529"
                     /db_xref="GeneID:133063312"
ORIGIN      
        1 malyfdhrie apdtvgspsh igwhpvhpll avasvsttsg gsvdmyleqg ervpdthver
       61 sfrvtslcwh ptrlilaigw esgevvmfnk qdkeqhavpa thtadiaila wspngnclvs
      121 gdrlgilllw rldqrgrvqg mpllrheygq plthcifllp ppgedlvqla raavsgdeka
      181 ldmfnwrksg fgsilkmgsq eglsffvslt dgtmhhvdek grtaqvastd ssiqtlfyle
      241 qrgalvavtd slllclftvt pegtaeevmk vklsgktghr aditlidgsl lvtalgetal
      301 rfwdlerges yvlspeekfg fekgenincv syckvkglla agtdkgrvam wrkvpglpng
      361 hgaegkekwt lqthtelegn imqikwgsrk sllavnsiss vlilreqams shfhqqvaav
      421 qvspsllsvy flstgvthsl rtdmhvsgvf atkdavavwn gkqvvifeps gatlrsagsf
      481 lcespvlamh eenvytvepn rvqvrtwqgt vkqllpfses egnpcfldic gtflvvgtdl
      541 ayfksfdlsr reakvhcsck slaelvpgvg gltslrcnas gskislllsk adnspdsric
      601 fydvdmdtvt ildlktgqid qretlsingq etkksqaled erltalvpmn hfwdqseprl
      661 fvceavrevp sappqptdrs mpaeadvlvl sffvseehgf llqdsfprpp afqtllgiqv
      721 phyyftrkpg eanledqlds gsqcipqavg rrplrdfvgl edcdkptrda mlnfsfflai
      781 gdmdeafrsi kliksqavwe nmarmcvktq rldvarvclg hmghaqgara lreaqqepep
      841 earvamlavq lgmledaeql ykrcgrydll nrllqasgqw qraievaerh drvhlrttyy
      901 nyarhleang dcslalsyye ksdthrfevp rmlaedlqal klyvskmkdk tlwrwwaqyl
      961 esqakmdaal hyyelaqdyf slvrvhcfqg niqraaeias etgnwaasyh larqyesqne
     1021 vrqavhfytr aqafnnairl ckehglddql mnlallsspe dmleaaryye ergeqmdrav
     1081 mlyhkaghfs kalelafatq qfaalqlvae dldeksdpal larcsdffle hgqyekavel
     1141 llaakkyqea lqlcleqnlt iteemaekmt vpkdckelse earralleqv asccmrqgsy
     1201 hlatkkytqa gnrlkamral lksgdtekiv ffagvsrqke iyimaanylq sldwqkdpev
     1261 mksiisfytk graldllagf ydacaqvevd eyqnydkahg alteaykcls kakarspldq
     1321 earlaqlqsr mtlvkrfmqa rrtytedpee sirqcqllle ephldssvrv gdvysflver
     1381 hvhagdlqaa ykyleemrrr lpsanmsyyv sqhivdavhq glglpltcea permrhnsve
     1441 ehkgadeeva eevesgp
//
LOCUS       XP_061008482            1457 aa            linear   MAM 02-DEC-2023
DEFINITION  intraflagellar transport protein 140 homolog isoform X1 [Dama
            dama].
ACCESSION   XP_061008482
VERSION     XP_061008482.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152499.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1457
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1457
                     /product="intraflagellar transport protein 140 homolog
                     isoform X1"
                     /calculated_mol_wt=163616
     Region          6..375
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          18..56
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          64..100
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          107..147
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          152..207
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          215..250
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          327..351
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          381..410
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          798..832
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(800..801,804..805,807,839,842..843,846..847,
                     849..850,892,900..901,904..905,908)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          <829..1072
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          837..886
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          891..921
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          949..998
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          968..>1222
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          1005..1031
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..1457
                     /gene="IFT140"
                     /coded_by="XM_061152499.1:153..4526"
                     /db_xref="GeneID:133063312"
ORIGIN      
        1 malyfdhrie apdtvgspsh igwhpvhpll avasvsttsg gsvdmyleqg ervpdthver
       61 sfrvtslcwh ptrlilaigw esgevvmfnk qdkeqhavpa thtadiaila wspngnclvs
      121 gdrlgilllw rldqrgrvqg mpllrheygq plthcifllp ppgedlvqla raavsgdeka
      181 ldmfnwrksg fgsilkmgsq eglsffvslt dgtmhhvdek grtaqvastd ssiqtlfyle
      241 qrgalvavtd slllclftvt pegtaeevmk vklsgktghr aditlidgsl lvtalgetal
      301 rfwdlerges yvlspeekfg fekgenincv syckvkglla agtdkgrvam wrkvpglpng
      361 hgaegkekwt lqthtelegn imqikwgsrk sllavnsiss vlilreqams shfhqqvaav
      421 qvspsllsvy flstgvthsl rtdmhvsgvf atkdavavwn gkqvvifeps gatlrsagsf
      481 lcespvlamh eenvytvepn rvqvrtwqgt vkqllpfses egnpcfldic gtflvvgtdl
      541 ayfksfdlsr reakvhcsck slaelvpgvg gltslrcnas gskislllsk adnspdsric
      601 fydvdmdtvt ildlktgqid qretlsingq etkksqaled erltalvpmn hfwdqseprl
      661 fvceavrevp sappqptdrs mpaeadvlvl sffvseehgf llqdsfprpp afqtllgiqv
      721 phyyftrkpg eanledqlds gsqcipqavg rrplrdfvgl edcdkptrda mlnfsfflai
      781 gdmdeafrsi kliksqavwe nmarmcvktq rldvarvclg hmghaqgara lreaqqepep
      841 earvamlavq lgmledaeql ykrcgrydll nrllqasgqw qraievaerh drvhlrttyy
      901 nyarhleang dcslalsyye ksdthrfevp rmlaedlqal klyvskmkdk tlwrwwaqyl
      961 esqakmdaal hyyelaqdyf slvrvhcfqg niqraaeias etgnwaasyh larqyesqne
     1021 vrqavhfytr aqafnnairl ckehglddql mnlallsspe dmleaaryye ergeqmdrav
     1081 mlyhkaghfs kalelafatq qfaalqlvae dldeksdpal larcsdffle hgqyekavel
     1141 llaakkyqea lqlcleqnlt iteemaekmt vpkdckelse earralleqv asccmrqgsy
     1201 hlatkkytqa gnrlkamral lksgdtekiv ffagvsrqke iyimaanylq sldwqkdpev
     1261 mksiisfytk graldllagf ydacaqvevd eyqnydkahg alteaykcls kakarspldq
     1321 earlaqlqsr mtlvkrfmqa rrtytedpee sirqcqllle ephldssvrv gdvysflver
     1381 hvhagdlqaa ykyleemrrr lpsanmsyyv sqhivdavhq glglpltcea permrhnsve
     1441 ehkgadeeva eevesgp
//
LOCUS       XP_061008483            1441 aa            linear   MAM 02-DEC-2023
DEFINITION  intraflagellar transport protein 140 homolog isoform X2 [Dama
            dama].
ACCESSION   XP_061008483
VERSION     XP_061008483.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152500.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1441
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1441
                     /product="intraflagellar transport protein 140 homolog
                     isoform X2"
                     /calculated_mol_wt=161954
     Region          6..375
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          18..56
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          64..100
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          107..147
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          152..207
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          215..250
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          327..351
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          381..410
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          762..873
                     /region_name="BepA"
                     /note="Outer membrane protein chaperone/metalloprotease
                     BepA/YfgC, contains M48 and TPR domains [Cell
                     wall/membrane/envelope biogenesis, Posttranslational
                     modification, protein turnover, chaperones]; COG4783"
                     /db_xref="CDD:443813"
     Region          782..816
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(784..785,788..789,791,823,826..827,830..831,
                     833..834,876,884..885,888..889,892)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          821..870
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          854..1128
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          875..905
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          933..982
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          989..1015
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..1441
                     /gene="IFT140"
                     /coded_by="XM_061152500.1:156..4481"
                     /db_xref="GeneID:133063312"
ORIGIN      
        1 malyfdhrie apdtvgspsh igwhpvhpll avasvsttsg gsvdmyleqg ervpdthver
       61 sfrvtslcwh ptrlilaigw esgevvmfnk qdkeqhavpa thtadiaila wspngnclvs
      121 gdrlgilllw rldqrgrvqg mpllrheygq plthcifllp ppgedlvqla raavsgdeka
      181 ldmfnwrksg fgsilkmgsq eglsffvslt dgtmhhvdek grtaqvastd ssiqtlfyle
      241 qrgalvavtd slllclftvt pegtaeevmk vklsgktghr aditlidgsl lvtalgetal
      301 rfwdlerges yvlspeekfg fekgenincv syckvkglla agtdkgrvam wrkvpglpng
      361 hgaegkekwt lqthtelegn imqikwgsrk sllavnsiss vlilreqams shfhqqvaav
      421 qvspsllsvy flstgvthsl rtdmhvsgvf atkdavavwn gkqvvifeps gatlrsagsf
      481 lcespvlamh eenvytvepn rvqvrtwqgt vkqllpfses egnpcfldic gtflvvgtdl
      541 ayfksfdlsr reakvhcsck slaelvpgvg gltslrcnas gskislllsk adnspdsric
      601 fydvdmdtvt ildlktgqid qretlsingq etkksqaled erltalvpmn hfwdqseprl
      661 fvceavread vlvlsffvse ehgfllqdsf prppafqtll giqvphyyft rkpgeanled
      721 qldsgsqcip qavgrrplrd fvgledcdkp trdamlnfsf flaigdmdea frsikliksq
      781 avwenmarmc vktqrldvar vclghmghaq garalreaqq epepearvam lavqlgmled
      841 aeqlykrcgr ydllnrllqa sgqwqraiev aerhdrvhlr ttyynyarhl eangdcslal
      901 syyeksdthr fevprmlaed lqalklyvsk mkdktlwrww aqylesqakm daalhyyela
      961 qdyfslvrvh cfqgniqraa eiasetgnwa asyhlarqye sqnevrqavh fytraqafnn
     1021 airlckehgl ddqlmnlall sspedmleaa ryyeergeqm dravmlyhka ghfskalela
     1081 fatqqfaalq lvaedldeks dpallarcsd fflehgqyek avelllaakk yqealqlcle
     1141 qnltiteema ekmtvpkdck elseearral leqvasccmr qgsyhlatkk ytqagnrlka
     1201 mrallksgdt ekivffagvs rqkeiyimaa nylqsldwqk dpevmksiis fytkgraldl
     1261 lagfydacaq vevdeyqnyd kahgalteay kclskakars pldqearlaq lqsrmtlvkr
     1321 fmqarrtyte dpeesirqcq llleephlds svrvgdvysf lverhvhagd lqaaykylee
     1381 mrrrlpsanm syyvsqhivd avhqglglpl tceapermrh nsveehkgad eevaeevesg
     1441 p
//
LOCUS       XP_061008484             826 aa            linear   MAM 02-DEC-2023
DEFINITION  telomere length regulation protein TEL2 homolog isoform X1 [Dama
            dama].
ACCESSION   XP_061008484
VERSION     XP_061008484.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152501.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..826
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..826
                     /product="telomere length regulation protein TEL2 homolog
                     isoform X1"
                     /calculated_mol_wt=90330
     Region          509..617
                     /region_name="Telomere_reg-2"
                     /note="Telomere length regulation protein; pfam10193"
                     /db_xref="CDD:462990"
     CDS             1..826
                     /gene="TELO2"
                     /coded_by="XM_061152501.1:245..2725"
                     /db_xref="GeneID:133063313"
ORIGIN      
        1 mdpvasavrl evqeavhils ssedgghivs tlqslrrylg emetqappge qeefsrthfs
       61 tvlrclvgkl spdwldllpd gqleelwasf flegpadqaf lvlmesiega aspsfrlmkm
      121 aqllarflsa grmaavmegq cgqqagpacr llqetlltrv vglpdrlgnc lqretlaaff
      181 pqnyfpllge evlrvlqavv dslrggldcs vsflsqvlgk acvhgrqkei lgvlvprltv
      241 ltqgnclwqr vcwrlvecvp drameavlkg lveaapgpev lsrllgnlvt kskkaqfvmt
      301 rkllflqysc stpvlqsllg ylamdsqrrp llvqalkell etwgsssair hvpleqqcyv
      361 skavliclah lgeaelracr eellaslmdg vknrldsslp pvrrlgmtva evasarlhpe
      421 gpslkfqyee deltreilal aapwlapdgp seaglpvapv grespdqetv dgggpqagre
      481 gsdseldsdd elvpydmsgd keqrnsktpa yvrdclealt asedwerwea alqaleglvl
      541 kspaatrevs lelakvllhl eektavagfe glrqralvav tvtdparvae ylavqfyaln
      601 yslrqrmdil dvlalaaqel srpgrlrraa qqgspgpgsq psvaavpawq avveervrck
      661 trrfckqgsa gwaaaagpne fnavagyfff pllqrfdrpv vtfdllgddq lvlgrlahtl
      721 galmylavnt vvavpmgkal lefvwalrfh gdayvrrgll saissvllsv paerlladlp
      781 dellearswl advaeqdade dcrllavkal llleklrdrl lplssp
//
LOCUS       XP_061008485             826 aa            linear   MAM 02-DEC-2023
DEFINITION  telomere length regulation protein TEL2 homolog isoform X1 [Dama
            dama].
ACCESSION   XP_061008485
VERSION     XP_061008485.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152502.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..826
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..826
                     /product="telomere length regulation protein TEL2 homolog
                     isoform X1"
                     /calculated_mol_wt=90330
     Region          509..617
                     /region_name="Telomere_reg-2"
                     /note="Telomere length regulation protein; pfam10193"
                     /db_xref="CDD:462990"
     CDS             1..826
                     /gene="TELO2"
                     /coded_by="XM_061152502.1:134..2614"
                     /db_xref="GeneID:133063313"
ORIGIN      
        1 mdpvasavrl evqeavhils ssedgghivs tlqslrrylg emetqappge qeefsrthfs
       61 tvlrclvgkl spdwldllpd gqleelwasf flegpadqaf lvlmesiega aspsfrlmkm
      121 aqllarflsa grmaavmegq cgqqagpacr llqetlltrv vglpdrlgnc lqretlaaff
      181 pqnyfpllge evlrvlqavv dslrggldcs vsflsqvlgk acvhgrqkei lgvlvprltv
      241 ltqgnclwqr vcwrlvecvp drameavlkg lveaapgpev lsrllgnlvt kskkaqfvmt
      301 rkllflqysc stpvlqsllg ylamdsqrrp llvqalkell etwgsssair hvpleqqcyv
      361 skavliclah lgeaelracr eellaslmdg vknrldsslp pvrrlgmtva evasarlhpe
      421 gpslkfqyee deltreilal aapwlapdgp seaglpvapv grespdqetv dgggpqagre
      481 gsdseldsdd elvpydmsgd keqrnsktpa yvrdclealt asedwerwea alqaleglvl
      541 kspaatrevs lelakvllhl eektavagfe glrqralvav tvtdparvae ylavqfyaln
      601 yslrqrmdil dvlalaaqel srpgrlrraa qqgspgpgsq psvaavpawq avveervrck
      661 trrfckqgsa gwaaaagpne fnavagyfff pllqrfdrpv vtfdllgddq lvlgrlahtl
      721 galmylavnt vvavpmgkal lefvwalrfh gdayvrrgll saissvllsv paerlladlp
      781 dellearswl advaeqdade dcrllavkal llleklrdrl lplssp
//
LOCUS       XP_061008486             826 aa            linear   MAM 02-DEC-2023
DEFINITION  telomere length regulation protein TEL2 homolog isoform X1 [Dama
            dama].
ACCESSION   XP_061008486
VERSION     XP_061008486.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152503.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..826
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..826
                     /product="telomere length regulation protein TEL2 homolog
                     isoform X1"
                     /calculated_mol_wt=90330
     Region          509..617
                     /region_name="Telomere_reg-2"
                     /note="Telomere length regulation protein; pfam10193"
                     /db_xref="CDD:462990"
     CDS             1..826
                     /gene="TELO2"
                     /coded_by="XM_061152503.1:103..2583"
                     /db_xref="GeneID:133063313"
ORIGIN      
        1 mdpvasavrl evqeavhils ssedgghivs tlqslrrylg emetqappge qeefsrthfs
       61 tvlrclvgkl spdwldllpd gqleelwasf flegpadqaf lvlmesiega aspsfrlmkm
      121 aqllarflsa grmaavmegq cgqqagpacr llqetlltrv vglpdrlgnc lqretlaaff
      181 pqnyfpllge evlrvlqavv dslrggldcs vsflsqvlgk acvhgrqkei lgvlvprltv
      241 ltqgnclwqr vcwrlvecvp drameavlkg lveaapgpev lsrllgnlvt kskkaqfvmt
      301 rkllflqysc stpvlqsllg ylamdsqrrp llvqalkell etwgsssair hvpleqqcyv
      361 skavliclah lgeaelracr eellaslmdg vknrldsslp pvrrlgmtva evasarlhpe
      421 gpslkfqyee deltreilal aapwlapdgp seaglpvapv grespdqetv dgggpqagre
      481 gsdseldsdd elvpydmsgd keqrnsktpa yvrdclealt asedwerwea alqaleglvl
      541 kspaatrevs lelakvllhl eektavagfe glrqralvav tvtdparvae ylavqfyaln
      601 yslrqrmdil dvlalaaqel srpgrlrraa qqgspgpgsq psvaavpawq avveervrck
      661 trrfckqgsa gwaaaagpne fnavagyfff pllqrfdrpv vtfdllgddq lvlgrlahtl
      721 galmylavnt vvavpmgkal lefvwalrfh gdayvrrgll saissvllsv paerlladlp
      781 dellearswl advaeqdade dcrllavkal llleklrdrl lplssp
//
LOCUS       XP_061008487             825 aa            linear   MAM 02-DEC-2023
DEFINITION  telomere length regulation protein TEL2 homolog isoform X2 [Dama
            dama].
ACCESSION   XP_061008487
VERSION     XP_061008487.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152504.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..825
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..825
                     /product="telomere length regulation protein TEL2 homolog
                     isoform X2"
                     /calculated_mol_wt=90201
     Region          509..617
                     /region_name="Telomere_reg-2"
                     /note="Telomere length regulation protein; pfam10193"
                     /db_xref="CDD:462990"
     CDS             1..825
                     /gene="TELO2"
                     /coded_by="XM_061152504.1:245..2722"
                     /db_xref="GeneID:133063313"
ORIGIN      
        1 mdpvasavrl evqeavhils ssedgghivs tlqslrrylg emetqappge qeefsrthfs
       61 tvlrclvgkl spdwldllpd gqleelwasf flegpadqaf lvlmesiega aspsfrlmkm
      121 aqllarflsa grmaavmegq cgqqagpacr llqetlltrv vglpdrlgnc lqretlaaff
      181 pqnyfpllge evlrvlqavv dslrggldcs vsflsqvlgk acvhgrqkei lgvlvprltv
      241 ltqgnclwqr vcwrlvecvp drameavlkg lveaapgpev lsrllgnlvt kskkaqfvmt
      301 rkllflqysc stpvlqsllg ylamdsqrrp llvqalkell etwgsssair hvpleqqcyv
      361 skavliclah lgeaelracr eellaslmdg vknrldsslp pvrrlgmtva evasarlhpe
      421 gpslkfqyee deltreilal aapwlapdgp seaglpvapv grespdqetv dgggpqagre
      481 gsdseldsdd elvpydmsgd keqrnsktpa yvrdclealt asedwerwea alqaleglvl
      541 kspaatrevs lelakvllhl eektavagfe glrqralvav tvtdparvae ylavqfyaln
      601 yslrqrmdil dvlalaaqel srpgrlrraa qqgspgpgsq psvaavpawq avveervrck
      661 trrfckgsag waaaagpnef navagyfffp llqrfdrpvv tfdllgddql vlgrlahtlg
      721 almylavntv vavpmgkall efvwalrfhg dayvrrglls aissvllsvp aerlladlpd
      781 ellearswla dvaeqdaded crllavkall lleklrdrll plssp
//
LOCUS       XP_061008488             792 aa            linear   MAM 02-DEC-2023
DEFINITION  telomere length regulation protein TEL2 homolog isoform X3 [Dama
            dama].
ACCESSION   XP_061008488
VERSION     XP_061008488.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152505.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..792
                     /product="telomere length regulation protein TEL2 homolog
                     isoform X3"
                     /calculated_mol_wt=86938
     Region          475..583
                     /region_name="Telomere_reg-2"
                     /note="Telomere length regulation protein; pfam10193"
                     /db_xref="CDD:462990"
     CDS             1..792
                     /gene="TELO2"
                     /coded_by="XM_061152505.1:245..2623"
                     /db_xref="GeneID:133063313"
ORIGIN      
        1 mdpvasavrl evqeavhils ssedgghivs tlqslrrylg emetqappge qeefsrthfs
       61 tvlrclvgkl spdwldllpd gqleelwasf flegpadqaf lvlmesiega aspsfrlmkm
      121 aqllarflsa grmaavmegq cgqqagpacr llqetlltrv vglpdrlgnc lqretlaaff
      181 pqnyfpllge evlrvlqavv dslrggldcs vsflsqvlgk acvhgrqkei lgvlvprltv
      241 ltqgnclwqr vcwrlvecvp drameavlkg lveaapgpev lsrllgnlvt kskkaqfvmt
      301 rkllflqysc stpvlqsllg ylamdsqrrp llvqalkell etwgsssair hvpleqqcyv
      361 skavliclah lgeaelracr eellaslmdg vknrldsslp pvrrlgmtva evasarlhpe
      421 gpslkfqyee deltreilal aapwlapdgp seagddelvp ydmsgdkeqr nsktpayvrd
      481 clealtased werweaalqa leglvlkspa atrevslela kvllhleekt avagfeglrq
      541 ralvavtvtd parvaeylav qfyalnyslr qrmdildvla laaqelsrpg rlrraaqqgs
      601 pgpgsqpsva avpawqavve ervrcktrrf ckqgsagwaa aagpnefnav agyfffpllq
      661 rfdrpvvtfd llgddqlvlg rlahtlgalm ylavntvvav pmgkallefv walrfhgday
      721 vrrgllsais svllsvpaer lladlpdell earswladva eqdadedcrl lavkalllle
      781 klrdrllpls sp
//
LOCUS       XP_061008489             779 aa            linear   MAM 02-DEC-2023
DEFINITION  telomere length regulation protein TEL2 homolog isoform X4 [Dama
            dama].
ACCESSION   XP_061008489
VERSION     XP_061008489.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152506.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..779
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..779
                     /product="telomere length regulation protein TEL2 homolog
                     isoform X4"
                     /calculated_mol_wt=85264
     Region          462..570
                     /region_name="Telomere_reg-2"
                     /note="Telomere length regulation protein; pfam10193"
                     /db_xref="CDD:462990"
     CDS             1..779
                     /gene="TELO2"
                     /coded_by="XM_061152506.1:245..2584"
                     /db_xref="GeneID:133063313"
ORIGIN      
        1 mdpvasavrl evqeavhils ssedgghivs tlqslrrylg emetqappge qeefsrthfs
       61 tvlrclvgkl spdwldllpd gqleelwasf flegpadqaf lvlmesiega arvvglpdrl
      121 gnclqretla affpqnyfpl lgeevlrvlq avvdslrggl dcsvsflsqv lgkacvhgrq
      181 keilgvlvpr ltvltqgncl wqrvcwrlve cvpdrameav lkglveaapg pevlsrllgn
      241 lvtkskkaqf vmtrkllflq yscstpvlqs llgylamdsq rrpllvqalk elletwgsss
      301 airhvpleqq cyvskavlic lahlgeaelr acreellasl mdgvknrlds slppvrrlgm
      361 tvaevasarl hpegpslkfq yeedeltrei lalaapwlap dgpseaglpv apvgrespdq
      421 etvdgggpqa gregsdseld sddelvpydm sgdkeqrnsk tpayvrdcle altasedwer
      481 weaalqaleg lvlkspaatr evslelakvl lhleektava gfeglrqral vavtvtdpar
      541 vaeylavqfy alnyslrqrm dildvlalaa qelsrpgrlr raaqqgspgp gsqpsvaavp
      601 awqavveerv rcktrrfckq gsagwaaaag pnefnavagy fffpllqrfd rpvvtfdllg
      661 ddqlvlgrla htlgalmyla vntvvavpmg kallefvwal rfhgdayvrr gllsaissvl
      721 lsvpaerlla dlpdellear swladvaeqd adedcrllav kalllleklr drllplssp
//
LOCUS       XP_061008491            1274 aa            linear   MAM 02-DEC-2023
DEFINITION  protein cramped-like [Dama dama].
ACCESSION   XP_061008491
VERSION     XP_061008491.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152508.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1274
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1274
                     /product="protein cramped-like"
                     /calculated_mol_wt=135045
     Region          165..222
                     /region_name="SANT"
                     /note="'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains.
                     Tandem copies of the domain bind telomeric DNA tandem
                     repeatsas part of the capping complex. Binding is sequence
                     dependent for repeats which contain the G/C rich motif
                     [C2-3 A (CA)1-6]. The domain is...; cl21498"
                     /db_xref="CDD:473887"
     Site            order(166,197,201,203..204,206,214..215,217,219..220)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212559"
     Region          <464..1091
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1274
                     /gene="CRAMP1"
                     /coded_by="XM_061152508.1:313..4137"
                     /db_xref="GeneID:133063314"
ORIGIN      
        1 mtvklgdggg gedglkrlgk rsaeedsleg egpgggdaae esggtkrdgk tprdggdgpq
       61 apsggpqaps pppacpqdqh hflrssvrpq skrlrkdssc aggsssagss gprgkgadgg
      121 gssaangpgv aptapaggsr sssrnlgsss gekeegkkvr rqweswsted kntffeglye
      181 hgkdfeaiqn nialkyrkkg kpasmvknke qvrhfyyrtw hkitkyidfd nvfsrglkks
      241 sqelyglicy gelrkkiggc mddknatkln eliqagattv rykgrnlrik apmcralkkl
      301 cdpdglsdee dqkpvrlplr vpvelqprnn hawarvqsla qnprlrmive lhrkvsslie
      361 flkqkwalhe vrirktleer qlqdsfseps qekvalhlfp genctltplp gvarvvhska
      421 fctvhwqegg rckqsakdth alppaqilgi qsgqgtargq lkcpravsea kaggrpppst
      481 dasqssgess pesapgegaa tsfsspdasd rlppglqdag grlektpaaa aaeggdspaq
      541 epgapvcacg qlpdledels lldpfprymk scqdliipeq grradprpaa wpspearvtd
      601 gadlsrarap spvrgppgpe pqpspglqpd vctkdladap aeepqekvsp sdpppqgqpa
      661 tkppkdvpas rlaqqlreeg wnlqtseslt laevylmmgk psklqleydw lavlgpdapg
      721 phaspppaaf hkqrllscll klistevnpr lapetntgst tsvrpaqeeq sttppgkvvt
      781 vssrsprcpr nqaalrhska fspssvpcss glrnpprpll vaspastgss dsdgglfavp
      841 ttlppnsrhg klffpnkete ltfrqhlssi smqsdfflpk prklrnrhlr kplvvqrtll
      901 prpsenqshn vcsfsilsns svtgrgsfrp vqsslakaav srpivpkvlp pqatgplasa
      961 idlaaksagi ipgsplpvld tdglsgiapl ssdevtaavt gpdstghhqn edplpavgat
     1021 sdpfisvpsr qepmadgfqn ppvlslsels kapvhnglst plppsdasst rlsppnvsal
     1081 ldislpgppe dvlsqgepat hisdsiieia issgqygegv plspaklngs dsskslpsps
     1141 sspqpdwias pthdpqwcps dptdsslssl fasfispeks rkmlptpvgt ssgtsllgps
     1201 lldgnsrdsf vsrsladvae vvdsqlvcmm nensvdyisr fndlaqelsi aepsrrealf
     1261 dgggggppvt dlsq
//
LOCUS       XP_061008492             239 aa            linear   MAM 02-DEC-2023
DEFINITION  jupiter microtubule associated homolog 2 isoform X1 [Dama dama].
ACCESSION   XP_061008492
VERSION     XP_061008492.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152509.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..239
                     /product="jupiter microtubule associated homolog 2 isoform
                     X1"
                     /calculated_mol_wt=25130
     CDS             1..239
                     /gene="JPT2"
                     /coded_by="XM_061152509.1:69..788"
                     /db_xref="GeneID:133063315"
ORIGIN      
        1 mfrapdsegg rpgpraakpp ggepgdrpee aapprkpdrm asnifgptea pqnvpkrtnp
       61 pggkgsgifd esgpvqtrpr lnppggkasd ifgspvaaas ptahpnkpkd hmllcegedt
      121 pdlrasaspr qepgepggpr eaacvqepap tidsheprlg prprshnkvl nppgavnrkp
      181 kccvpsyalw rdlapcfcpl kprpglnvgi safcpretgl dstlqavllv scsfyphqp
//
LOCUS       XP_061008493             182 aa            linear   MAM 02-DEC-2023
DEFINITION  jupiter microtubule associated homolog 2 isoform X2 [Dama dama].
ACCESSION   XP_061008493
VERSION     XP_061008493.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152510.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..182
                     /product="jupiter microtubule associated homolog 2 isoform
                     X2"
                     /calculated_mol_wt=18885
     CDS             1..182
                     /gene="JPT2"
                     /coded_by="XM_061152510.1:69..617"
                     /db_xref="GeneID:133063315"
ORIGIN      
        1 mfrapdsegg rpgpraakpp ggepgdrpee aapprkpdrm asnifgptea pqnvpkrtnp
       61 pggkgsgifd esgpvqtrpr lnppggkasd ifgspvaaas ptahpnkpkd hmllcegedt
      121 pdlrasaspr qepgepggpr eaacvqepap tidsheprlg prprshnkvl nppggkssis
      181 fy
//
LOCUS       XP_061008494            1332 aa            linear   MAM 02-DEC-2023
DEFINITION  C-Jun-amino-terminal kinase-interacting protein 3 isoform X1 [Dama
            dama].
ACCESSION   XP_061008494
VERSION     XP_061008494.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152511.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1332
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1332
                     /product="C-Jun-amino-terminal kinase-interacting protein
                     3 isoform X1"
                     /calculated_mol_wt=146503
     Region          29..184
                     /region_name="Jnk-SapK_ap_N"
                     /note="JNK_SAPK-associated protein-1; pfam09744"
                     /db_xref="CDD:462875"
     Region          <63..310
                     /region_name="CwlO1"
                     /note="Uncharacterized N-terminal coiled-coil domain of
                     peptidoglycan hydrolase CwlO [Function unknown]; COG3883"
                     /db_xref="CDD:443091"
     Region          414..482
                     /region_name="JIP_LZII"
                     /note="JNK-interacting protein leucine zipper II;
                     pfam16471"
                     /db_xref="CDD:465127"
     Region          <425..>551
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <878..>975
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          947..>1168
                     /region_name="WD40_2"
                     /note="WD40 repeated domain; pfam19056"
                     /db_xref="CDD:465964"
     CDS             1..1332
                     /gene="MAPK8IP3"
                     /coded_by="XM_061152511.1:77..4075"
                     /db_xref="GeneID:133063316"
ORIGIN      
        1 mmeiqmdegg gvvvyqddyc sgsvmservs glagsiyref erlihcydee vvkelmplvv
       61 nvlenldsvl senqehevel ellredneql ltqyerekal rkqaeekfie fedaleqekk
      121 elqiqvehye fqtrqlelka knyadqisrl eeresemkke ynalhqrhte miqtyvehie
      181 rskmqqvggn sqtegslpgr sprqswrrsr kerptslsvf pladgsvraq mggkpapagd
      241 hwrlsdlgql qlsssyqcpq demsesgqss aaatpsttgt ksntptssvp saavtplseg
      301 pqplgdhggs rnskrarekr nsrnmevqvt qemrnvsigm gssdewsdvq diidstpeld
      361 mgreprldrt gssptqgivn kafgintdsl yhelstagse vigdvdegad llgmgkevgn
      421 lllensqlle tknalnvvkn dliakvdqls geqealkgdl eaarqaklrl enrikdleee
      481 lrrvkseait ahrepkeeve dvssclctel dkipmaqrrr ftrvemarvl mernqykerl
      541 melqeavrwt emirasrehp svqekkksti wqffsrlfss ssspppakrs ypsvnihyks
      601 pttagfsqrr nhgmcqssag srpleffpdd dctssarreq kreqyrqvre hvrnddgrlq
      661 acgwslpaky kqlspnggqe dtrmknvpvp vycrplvekd ptmklwcaag vnlsgwklse
      721 dgpgngvkpa pgrdpltcdr evegetksnh aspekkkake lpeadatssr vwiltstltt
      781 skvvvidanq pgtvvdqftv cnahvlciss ipaasdgdyp pgeifldsdv npedsgadgv
      841 lagitlvgca trcnvprsnc ssrgdtpvld kgqgevsava ngkvnpapst eeateatevp
      901 dagpseaeaa avrpgplteh vftdpaptpp psaqpdseng peadmssaqp epepsgdpag
      961 stsaaptmwl gaqngwlyvh savanwkkcl hsiklkdsvl slvhvkgrvl valadgtlai
     1021 fhrgedgqwd lsnyhlmdlg hphhsircma vvhdrvwcgy knkvhviqpk tmqieksfda
     1081 hprresqvrq lawigdgvwv sirldstlrl yhahthqhlq dvdiepyvsk mlgtgklgfs
     1141 fvritallia gnrlwvgtgn gvvisiplte tvvlhrgqll glranktspt sgegarpggv
     1201 ihvygddssd raassfipyc smaqaqlcfh ghrdavkffv svpgnvlatl ngsvldspse
     1261 gpgpaapada eaqklknvlv lsggegyidf rigdgeddep eegvgdvsqv kpvlskaers
     1321 hiivwqvsyt pe
//
LOCUS       XP_061008495            1331 aa            linear   MAM 02-DEC-2023
DEFINITION  C-Jun-amino-terminal kinase-interacting protein 3 isoform X2 [Dama
            dama].
ACCESSION   XP_061008495
VERSION     XP_061008495.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152512.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1331
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1331
                     /product="C-Jun-amino-terminal kinase-interacting protein
                     3 isoform X2"
                     /calculated_mol_wt=146416
     Region          29..184
                     /region_name="Jnk-SapK_ap_N"
                     /note="JNK_SAPK-associated protein-1; pfam09744"
                     /db_xref="CDD:462875"
     Region          <63..312
                     /region_name="CwlO1"
                     /note="Uncharacterized N-terminal coiled-coil domain of
                     peptidoglycan hydrolase CwlO [Function unknown]; COG3883"
                     /db_xref="CDD:443091"
     Region          413..481
                     /region_name="JIP_LZII"
                     /note="JNK-interacting protein leucine zipper II;
                     pfam16471"
                     /db_xref="CDD:465127"
     Region          <424..>550
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <877..>974
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          946..>1167
                     /region_name="WD40_2"
                     /note="WD40 repeated domain; pfam19056"
                     /db_xref="CDD:465964"
     CDS             1..1331
                     /gene="MAPK8IP3"
                     /coded_by="XM_061152512.1:77..4072"
                     /db_xref="GeneID:133063316"
ORIGIN      
        1 mmeiqmdegg gvvvyqddyc sgsvmservs glagsiyref erlihcydee vvkelmplvv
       61 nvlenldsvl senqehevel ellredneql ltqyerekal rkqaeekfie fedaleqekk
      121 elqiqvehye fqtrqlelka knyadqisrl eeresemkke ynalhqrhte miqtyvehie
      181 rskmqqvggn sqtegslpgr sprqswrrrk erptslsvfp ladgsvraqm ggkpapagdh
      241 wrlsdlgqlq lsssyqcpqd emsesgqssa aatpsttgtk sntptssvps aavtplsegp
      301 qplgdhggsr nskrarekrn srnmevqvtq emrnvsigmg ssdewsdvqd iidstpeldm
      361 greprldrtg ssptqgivnk afgintdsly helstagsev igdvdegadl lgmgkevgnl
      421 llensqllet knalnvvknd liakvdqlsg eqealkgdle aarqaklrle nrikdleeel
      481 rrvkseaita hrepkeeved vssclcteld kipmaqrrrf trvemarvlm ernqykerlm
      541 elqeavrwte mirasrehps vqekkkstiw qffsrlfsss sspppakrsy psvnihyksp
      601 ttagfsqrrn hgmcqssags rpleffpddd ctssarreqk reqyrqvreh vrnddgrlqa
      661 cgwslpakyk qlspnggqed trmknvpvpv ycrplvekdp tmklwcaagv nlsgwklsed
      721 gpgngvkpap grdpltcdre vegetksnha spekkkakel peadatssrv wiltstltts
      781 kvvvidanqp gtvvdqftvc nahvlcissi paasdgdypp geifldsdvn pedsgadgvl
      841 agitlvgcat rcnvprsncs srgdtpvldk gqgevsavan gkvnpapste eateatevpd
      901 agpseaeaaa vrpgpltehv ftdpaptppp saqpdsengp eadmssaqpe pepsgdpags
      961 tsaaptmwlg aqngwlyvhs avanwkkclh siklkdsvls lvhvkgrvlv aladgtlaif
     1021 hrgedgqwdl snyhlmdlgh phhsircmav vhdrvwcgyk nkvhviqpkt mqieksfdah
     1081 prresqvrql awigdgvwvs irldstlrly hahthqhlqd vdiepyvskm lgtgklgfsf
     1141 vritalliag nrlwvgtgng vvisipltet vvlhrgqllg lranktspts gegarpggvi
     1201 hvygddssdr aassfipycs maqaqlcfhg hrdavkffvs vpgnvlatln gsvldspseg
     1261 pgpaapadae aqklknvlvl sggegyidfr igdgeddepe egvgdvsqvk pvlskaersh
     1321 iivwqvsytp e
//
LOCUS       XP_061008496            1324 aa            linear   MAM 02-DEC-2023
DEFINITION  C-Jun-amino-terminal kinase-interacting protein 3 isoform X3 [Dama
            dama].
ACCESSION   XP_061008496
VERSION     XP_061008496.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152513.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1324
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1324
                     /product="C-Jun-amino-terminal kinase-interacting protein
                     3 isoform X3"
                     /calculated_mol_wt=145448
     Region          29..184
                     /region_name="Jnk-SapK_ap_N"
                     /note="JNK_SAPK-associated protein-1; pfam09744"
                     /db_xref="CDD:462875"
     Region          406..474
                     /region_name="JIP_LZII"
                     /note="JNK-interacting protein leucine zipper II;
                     pfam16471"
                     /db_xref="CDD:465127"
     Region          <417..>543
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <870..>967
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          939..>1160
                     /region_name="WD40_2"
                     /note="WD40 repeated domain; pfam19056"
                     /db_xref="CDD:465964"
     CDS             1..1324
                     /gene="MAPK8IP3"
                     /coded_by="XM_061152513.1:77..4051"
                     /db_xref="GeneID:133063316"
ORIGIN      
        1 mmeiqmdegg gvvvyqddyc sgsvmservs glagsiyref erlihcydee vvkelmplvv
       61 nvlenldsvl senqehevel ellredneql ltqyerekal rkqaeekfie fedaleqekk
      121 elqiqvehye fqtrqlelka knyadqisrl eeresemkke ynalhqrhte miqtyvehie
      181 rskmqqvggn sqtegslpgr srkerptsls vfpladgsvr aqmggkpapa gdhwrlsdlg
      241 qlqlsssyqc pqdemsesgq ssaaatpstt gtksntptss vpsaavtpls egpqplgdhg
      301 gsrnskrare krnsrnmevq vtqemrnvsi gmgssdewsd vqdiidstpe ldmgreprld
      361 rtgssptqgi vnkafgintd slyhelstag sevigdvdeg adllgmgkev gnlllensql
      421 letknalnvv kndliakvdq lsgeqealkg dleaarqakl rlenrikdle eelrrvksea
      481 itahrepkee vedvssclct eldkipmaqr rrftrvemar vlmernqyke rlmelqeavr
      541 wtemirasre hpsvqekkks tiwqffsrlf ssssspppak rsypsvnihy kspttagfsq
      601 rrnhgmcqss agsrpleffp dddctssarr eqkreqyrqv rehvrnddgr lqacgwslpa
      661 kykqlspngg qedtrmknvp vpvycrplve kdptmklwca agvnlsgwkl sedgpgngvk
      721 papgrdpltc drevegetks nhaspekkka kelpeadats srvwiltstl ttskvvvida
      781 nqpgtvvdqf tvcnahvlci ssipaasdgd yppgeiflds dvnpedsgad gvlagitlvg
      841 catrcnvprs ncssrgdtpv ldkgqgevsa vangkvnpap steeateate vpdagpseae
      901 aaavrpgplt ehvftdpapt pppsaqpdse ngpeadmssa qpepepsgdp agstsaaptm
      961 wlgaqngwly vhsavanwkk clhsiklkds vlslvhvkgr vlvaladgtl aifhrgedgq
     1021 wdlsnyhlmd lghphhsirc mavvhdrvwc gyknkvhviq pktmqieksf dahprresqv
     1081 rqlawigdgv wvsirldstl rlyhahthqh lqdvdiepyv skmlgtgklg fsfvritall
     1141 iagnrlwvgt gngvvisipl tetvvlhrgq llglrankts ptsgegarpg gvihvygdds
     1201 sdraassfip ycsmaqaqlc fhghrdavkf fvsvpgnvla tlngsvldsp segpgpaapa
     1261 daeaqklknv lvlsggegyi dfrigdgedd epeegvgdvs qvkpvlskae rshiivwqvs
     1321 ytpe
//
LOCUS       XP_061008497            1323 aa            linear   MAM 02-DEC-2023
DEFINITION  C-Jun-amino-terminal kinase-interacting protein 3 isoform X4 [Dama
            dama].
ACCESSION   XP_061008497
VERSION     XP_061008497.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152514.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1323
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1323
                     /product="C-Jun-amino-terminal kinase-interacting protein
                     3 isoform X4"
                     /calculated_mol_wt=145361
     Region          29..184
                     /region_name="Jnk-SapK_ap_N"
                     /note="JNK_SAPK-associated protein-1; pfam09744"
                     /db_xref="CDD:462875"
     Region          <80..300
                     /region_name="CwlO1"
                     /note="Uncharacterized N-terminal coiled-coil domain of
                     peptidoglycan hydrolase CwlO [Function unknown]; COG3883"
                     /db_xref="CDD:443091"
     Region          405..473
                     /region_name="JIP_LZII"
                     /note="JNK-interacting protein leucine zipper II;
                     pfam16471"
                     /db_xref="CDD:465127"
     Region          <416..>542
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <869..>966
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          938..>1159
                     /region_name="WD40_2"
                     /note="WD40 repeated domain; pfam19056"
                     /db_xref="CDD:465964"
     CDS             1..1323
                     /gene="MAPK8IP3"
                     /coded_by="XM_061152514.1:77..4048"
                     /db_xref="GeneID:133063316"
ORIGIN      
        1 mmeiqmdegg gvvvyqddyc sgsvmservs glagsiyref erlihcydee vvkelmplvv
       61 nvlenldsvl senqehevel ellredneql ltqyerekal rkqaeekfie fedaleqekk
      121 elqiqvehye fqtrqlelka knyadqisrl eeresemkke ynalhqrhte miqtyvehie
      181 rskmqqvggn sqtegslpgr rkerptslsv fpladgsvra qmggkpapag dhwrlsdlgq
      241 lqlsssyqcp qdemsesgqs saaatpsttg tksntptssv psaavtplse gpqplgdhgg
      301 srnskrarek rnsrnmevqv tqemrnvsig mgssdewsdv qdiidstpel dmgreprldr
      361 tgssptqgiv nkafgintds lyhelstags evigdvdega dllgmgkevg nlllensqll
      421 etknalnvvk ndliakvdql sgeqealkgd leaarqaklr lenrikdlee elrrvkseai
      481 tahrepkeev edvssclcte ldkipmaqrr rftrvemarv lmernqyker lmelqeavrw
      541 temirasreh psvqekkkst iwqffsrlfs sssspppakr sypsvnihyk spttagfsqr
      601 rnhgmcqssa gsrpleffpd ddctssarre qkreqyrqvr ehvrnddgrl qacgwslpak
      661 ykqlspnggq edtrmknvpv pvycrplvek dptmklwcaa gvnlsgwkls edgpgngvkp
      721 apgrdpltcd revegetksn haspekkkak elpeadatss rvwiltstlt tskvvvidan
      781 qpgtvvdqft vcnahvlcis sipaasdgdy ppgeifldsd vnpedsgadg vlagitlvgc
      841 atrcnvprsn cssrgdtpvl dkgqgevsav angkvnpaps teeateatev pdagpseaea
      901 aavrpgplte hvftdpaptp ppsaqpdsen gpeadmssaq pepepsgdpa gstsaaptmw
      961 lgaqngwlyv hsavanwkkc lhsiklkdsv lslvhvkgrv lvaladgtla ifhrgedgqw
     1021 dlsnyhlmdl ghphhsircm avvhdrvwcg yknkvhviqp ktmqieksfd ahprresqvr
     1081 qlawigdgvw vsirldstlr lyhahthqhl qdvdiepyvs kmlgtgklgf sfvritalli
     1141 agnrlwvgtg ngvvisiplt etvvlhrgql lglranktsp tsgegarpgg vihvygddss
     1201 draassfipy csmaqaqlcf hghrdavkff vsvpgnvlat lngsvldsps egpgpaapad
     1261 aeaqklknvl vlsggegyid frigdgedde peegvgdvsq vkpvlskaer shiivwqvsy
     1321 tpe
//
LOCUS       XP_061008498            1301 aa            linear   MAM 02-DEC-2023
DEFINITION  C-Jun-amino-terminal kinase-interacting protein 3 isoform X5 [Dama
            dama].
ACCESSION   XP_061008498
VERSION     XP_061008498.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152515.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1301
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1301
                     /product="C-Jun-amino-terminal kinase-interacting protein
                     3 isoform X5"
                     /calculated_mol_wt=143166
     Region          29..184
                     /region_name="Jnk-SapK_ap_N"
                     /note="JNK_SAPK-associated protein-1; pfam09744"
                     /db_xref="CDD:462875"
     Region          63..518
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     Region          383..451
                     /region_name="JIP_LZII"
                     /note="JNK-interacting protein leucine zipper II;
                     pfam16471"
                     /db_xref="CDD:465127"
     Region          <847..>944
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          916..>1137
                     /region_name="WD40_2"
                     /note="WD40 repeated domain; pfam19056"
                     /db_xref="CDD:465964"
     CDS             1..1301
                     /gene="MAPK8IP3"
                     /coded_by="XM_061152515.1:77..3982"
                     /db_xref="GeneID:133063316"
ORIGIN      
        1 mmeiqmdegg gvvvyqddyc sgsvmservs glagsiyref erlihcydee vvkelmplvv
       61 nvlenldsvl senqehevel ellredneql ltqyerekal rkqaeekfie fedaleqekk
      121 elqiqvehye fqtrqlelka knyadqisrl eeresemkke ynalhqrhte miqtyvehie
      181 rskmqqvggn sqtegslpgr sprqswrrsr kerptslsvf pladgscpqd emsesgqssa
      241 aatpsttgtk sntptssvps aavtplsegp qplgdhggsr nskrarekrn srnmevqvtq
      301 emrnvsigmg ssdewsdvqd iidstpeldm greprldrtg ssptqgivnk afgintdsly
      361 helstagsev igdvdegadl lgmgkevgnl llensqllet knalnvvknd liakvdqlsg
      421 eqealkgdle aarqaklrle nrikdleeel rrvkseaita hrepkeeved vssclcteld
      481 kipmaqrrrf trvemarvlm ernqykerlm elqeavrwte mirasrehps vqekkkstiw
      541 qffsrlfsss sspppakrsy psvnihyksp ttagfsqrrn hgmcqssags rpleffpddd
      601 ctssarreqk reqyrqvreh vrnddgrlqa cgwslpakyk qlspnggqed trmknvpvpv
      661 ycrplvekdp tmklwcaagv nlsgwklsed gpgngvkpap grdpltcdre vegetksnha
      721 spekkkakel peadatssrv wiltstltts kvvvidanqp gtvvdqftvc nahvlcissi
      781 paasdgdypp geifldsdvn pedsgadgvl agitlvgcat rcnvprsncs srgdtpvldk
      841 gqgevsavan gkvnpapste eateatevpd agpseaeaaa vrpgpltehv ftdpaptppp
      901 saqpdsengp eadmssaqpe pepsgdpags tsaaptmwlg aqngwlyvhs avanwkkclh
      961 siklkdsvls lvhvkgrvlv aladgtlaif hrgedgqwdl snyhlmdlgh phhsircmav
     1021 vhdrvwcgyk nkvhviqpkt mqieksfdah prresqvrql awigdgvwvs irldstlrly
     1081 hahthqhlqd vdiepyvskm lgtgklgfsf vritalliag nrlwvgtgng vvisipltet
     1141 vvlhrgqllg lranktspts gegarpggvi hvygddssdr aassfipycs maqaqlcfhg
     1201 hrdavkffvs vpgnvlatln gsvldspseg pgpaapadae aqklknvlvl sggegyidfr
     1261 igdgeddepe egvgdvsqvk pvlskaersh iivwqvsytp e
//
LOCUS       XP_061008499            1300 aa            linear   MAM 02-DEC-2023
DEFINITION  C-Jun-amino-terminal kinase-interacting protein 3 isoform X6 [Dama
            dama].
ACCESSION   XP_061008499
VERSION     XP_061008499.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152516.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1300
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1300
                     /product="C-Jun-amino-terminal kinase-interacting protein
                     3 isoform X6"
                     /calculated_mol_wt=143079
     Region          29..184
                     /region_name="Jnk-SapK_ap_N"
                     /note="JNK_SAPK-associated protein-1; pfam09744"
                     /db_xref="CDD:462875"
     Region          63..517
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     Region          382..450
                     /region_name="JIP_LZII"
                     /note="JNK-interacting protein leucine zipper II;
                     pfam16471"
                     /db_xref="CDD:465127"
     Region          <846..>943
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          915..>1136
                     /region_name="WD40_2"
                     /note="WD40 repeated domain; pfam19056"
                     /db_xref="CDD:465964"
     CDS             1..1300
                     /gene="MAPK8IP3"
                     /coded_by="XM_061152516.1:77..3979"
                     /db_xref="GeneID:133063316"
ORIGIN      
        1 mmeiqmdegg gvvvyqddyc sgsvmservs glagsiyref erlihcydee vvkelmplvv
       61 nvlenldsvl senqehevel ellredneql ltqyerekal rkqaeekfie fedaleqekk
      121 elqiqvehye fqtrqlelka knyadqisrl eeresemkke ynalhqrhte miqtyvehie
      181 rskmqqvggn sqtegslpgr sprqswrrrk erptslsvfp ladgscpqde msesgqssaa
      241 atpsttgtks ntptssvpsa avtplsegpq plgdhggsrn skrarekrns rnmevqvtqe
      301 mrnvsigmgs sdewsdvqdi idstpeldmg reprldrtgs sptqgivnka fgintdslyh
      361 elstagsevi gdvdegadll gmgkevgnll lensqlletk nalnvvkndl iakvdqlsge
      421 qealkgdlea arqaklrlen rikdleeelr rvkseaitah repkeevedv ssclcteldk
      481 ipmaqrrrft rvemarvlme rnqykerlme lqeavrwtem irasrehpsv qekkkstiwq
      541 ffsrlfssss spppakrsyp svnihykspt tagfsqrrnh gmcqssagsr pleffpdddc
      601 tssarreqkr eqyrqvrehv rnddgrlqac gwslpakykq lspnggqedt rmknvpvpvy
      661 crplvekdpt mklwcaagvn lsgwklsedg pgngvkpapg rdpltcdrev egetksnhas
      721 pekkkakelp eadatssrvw iltstlttsk vvvidanqpg tvvdqftvcn ahvlcissip
      781 aasdgdyppg eifldsdvnp edsgadgvla gitlvgcatr cnvprsncss rgdtpvldkg
      841 qgevsavang kvnpapstee ateatevpda gpseaeaaav rpgpltehvf tdpaptppps
      901 aqpdsengpe admssaqpep epsgdpagst saaptmwlga qngwlyvhsa vanwkkclhs
      961 iklkdsvlsl vhvkgrvlva ladgtlaifh rgedgqwdls nyhlmdlghp hhsircmavv
     1021 hdrvwcgykn kvhviqpktm qieksfdahp rresqvrqla wigdgvwvsi rldstlrlyh
     1081 ahthqhlqdv diepyvskml gtgklgfsfv ritalliagn rlwvgtgngv visipltetv
     1141 vlhrgqllgl ranktsptsg egarpggvih vygddssdra assfipycsm aqaqlcfhgh
     1201 rdavkffvsv pgnvlatlng svldspsegp gpaapadaea qklknvlvls ggegyidfri
     1261 gdgeddepee gvgdvsqvkp vlskaershi ivwqvsytpe
//
LOCUS       XP_061008501            1293 aa            linear   MAM 02-DEC-2023
DEFINITION  C-Jun-amino-terminal kinase-interacting protein 3 isoform X7 [Dama
            dama].
ACCESSION   XP_061008501
VERSION     XP_061008501.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152518.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1293
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1293
                     /product="C-Jun-amino-terminal kinase-interacting protein
                     3 isoform X7"
                     /calculated_mol_wt=142112
     Region          29..184
                     /region_name="Jnk-SapK_ap_N"
                     /note="JNK_SAPK-associated protein-1; pfam09744"
                     /db_xref="CDD:462875"
     Region          63..510
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     Region          375..443
                     /region_name="JIP_LZII"
                     /note="JNK-interacting protein leucine zipper II;
                     pfam16471"
                     /db_xref="CDD:465127"
     Region          <839..>936
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          908..>1129
                     /region_name="WD40_2"
                     /note="WD40 repeated domain; pfam19056"
                     /db_xref="CDD:465964"
     CDS             1..1293
                     /gene="MAPK8IP3"
                     /coded_by="XM_061152518.1:77..3958"
                     /db_xref="GeneID:133063316"
ORIGIN      
        1 mmeiqmdegg gvvvyqddyc sgsvmservs glagsiyref erlihcydee vvkelmplvv
       61 nvlenldsvl senqehevel ellredneql ltqyerekal rkqaeekfie fedaleqekk
      121 elqiqvehye fqtrqlelka knyadqisrl eeresemkke ynalhqrhte miqtyvehie
      181 rskmqqvggn sqtegslpgr srkerptsls vfpladgscp qdemsesgqs saaatpsttg
      241 tksntptssv psaavtplse gpqplgdhgg srnskrarek rnsrnmevqv tqemrnvsig
      301 mgssdewsdv qdiidstpel dmgreprldr tgssptqgiv nkafgintds lyhelstags
      361 evigdvdega dllgmgkevg nlllensqll etknalnvvk ndliakvdql sgeqealkgd
      421 leaarqaklr lenrikdlee elrrvkseai tahrepkeev edvssclcte ldkipmaqrr
      481 rftrvemarv lmernqyker lmelqeavrw temirasreh psvqekkkst iwqffsrlfs
      541 sssspppakr sypsvnihyk spttagfsqr rnhgmcqssa gsrpleffpd ddctssarre
      601 qkreqyrqvr ehvrnddgrl qacgwslpak ykqlspnggq edtrmknvpv pvycrplvek
      661 dptmklwcaa gvnlsgwkls edgpgngvkp apgrdpltcd revegetksn haspekkkak
      721 elpeadatss rvwiltstlt tskvvvidan qpgtvvdqft vcnahvlcis sipaasdgdy
      781 ppgeifldsd vnpedsgadg vlagitlvgc atrcnvprsn cssrgdtpvl dkgqgevsav
      841 angkvnpaps teeateatev pdagpseaea aavrpgplte hvftdpaptp ppsaqpdsen
      901 gpeadmssaq pepepsgdpa gstsaaptmw lgaqngwlyv hsavanwkkc lhsiklkdsv
      961 lslvhvkgrv lvaladgtla ifhrgedgqw dlsnyhlmdl ghphhsircm avvhdrvwcg
     1021 yknkvhviqp ktmqieksfd ahprresqvr qlawigdgvw vsirldstlr lyhahthqhl
     1081 qdvdiepyvs kmlgtgklgf sfvritalli agnrlwvgtg ngvvisiplt etvvlhrgql
     1141 lglranktsp tsgegarpgg vihvygddss draassfipy csmaqaqlcf hghrdavkff
     1201 vsvpgnvlat lngsvldsps egpgpaapad aeaqklknvl vlsggegyid frigdgedde
     1261 peegvgdvsq vkpvlskaer shiivwqvsy tpe
//
LOCUS       XP_061008502            1292 aa            linear   MAM 02-DEC-2023
DEFINITION  C-Jun-amino-terminal kinase-interacting protein 3 isoform X8 [Dama
            dama].
ACCESSION   XP_061008502
VERSION     XP_061008502.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152519.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1292
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1292
                     /product="C-Jun-amino-terminal kinase-interacting protein
                     3 isoform X8"
                     /calculated_mol_wt=142025
     Region          29..184
                     /region_name="Jnk-SapK_ap_N"
                     /note="JNK_SAPK-associated protein-1; pfam09744"
                     /db_xref="CDD:462875"
     Region          63..509
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     Region          374..442
                     /region_name="JIP_LZII"
                     /note="JNK-interacting protein leucine zipper II;
                     pfam16471"
                     /db_xref="CDD:465127"
     Region          <838..>935
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          907..>1128
                     /region_name="WD40_2"
                     /note="WD40 repeated domain; pfam19056"
                     /db_xref="CDD:465964"
     CDS             1..1292
                     /gene="MAPK8IP3"
                     /coded_by="XM_061152519.1:77..3955"
                     /db_xref="GeneID:133063316"
ORIGIN      
        1 mmeiqmdegg gvvvyqddyc sgsvmservs glagsiyref erlihcydee vvkelmplvv
       61 nvlenldsvl senqehevel ellredneql ltqyerekal rkqaeekfie fedaleqekk
      121 elqiqvehye fqtrqlelka knyadqisrl eeresemkke ynalhqrhte miqtyvehie
      181 rskmqqvggn sqtegslpgr rkerptslsv fpladgscpq demsesgqss aaatpsttgt
      241 ksntptssvp saavtplseg pqplgdhggs rnskrarekr nsrnmevqvt qemrnvsigm
      301 gssdewsdvq diidstpeld mgreprldrt gssptqgivn kafgintdsl yhelstagse
      361 vigdvdegad llgmgkevgn lllensqlle tknalnvvkn dliakvdqls geqealkgdl
      421 eaarqaklrl enrikdleee lrrvkseait ahrepkeeve dvssclctel dkipmaqrrr
      481 ftrvemarvl mernqykerl melqeavrwt emirasrehp svqekkksti wqffsrlfss
      541 ssspppakrs ypsvnihyks pttagfsqrr nhgmcqssag srpleffpdd dctssarreq
      601 kreqyrqvre hvrnddgrlq acgwslpaky kqlspnggqe dtrmknvpvp vycrplvekd
      661 ptmklwcaag vnlsgwklse dgpgngvkpa pgrdpltcdr evegetksnh aspekkkake
      721 lpeadatssr vwiltstltt skvvvidanq pgtvvdqftv cnahvlciss ipaasdgdyp
      781 pgeifldsdv npedsgadgv lagitlvgca trcnvprsnc ssrgdtpvld kgqgevsava
      841 ngkvnpapst eeateatevp dagpseaeaa avrpgplteh vftdpaptpp psaqpdseng
      901 peadmssaqp epepsgdpag stsaaptmwl gaqngwlyvh savanwkkcl hsiklkdsvl
      961 slvhvkgrvl valadgtlai fhrgedgqwd lsnyhlmdlg hphhsircma vvhdrvwcgy
     1021 knkvhviqpk tmqieksfda hprresqvrq lawigdgvwv sirldstlrl yhahthqhlq
     1081 dvdiepyvsk mlgtgklgfs fvritallia gnrlwvgtgn gvvisiplte tvvlhrgqll
     1141 glranktspt sgegarpggv ihvygddssd raassfipyc smaqaqlcfh ghrdavkffv
     1201 svpgnvlatl ngsvldspse gpgpaapada eaqklknvlv lsggegyidf rigdgeddep
     1261 eegvgdvsqv kpvlskaers hiivwqvsyt pe
//
LOCUS       XP_061008503             218 aa            linear   MAM 02-DEC-2023
DEFINITION  small ribosomal subunit protein mS34 [Dama dama].
ACCESSION   XP_061008503
VERSION     XP_061008503.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152520.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..218
                     /product="small ribosomal subunit protein mS34"
                     /calculated_mol_wt=25807
     Region          61..187
                     /region_name="MRP-S34"
                     /note="Mitochondrial 28S ribosomal protein S34; pfam16053"
                     /db_xref="CDD:464995"
     CDS             1..218
                     /gene="MRPS34"
                     /coded_by="XM_061152520.1:36..692"
                     /db_xref="GeneID:133063317"
ORIGIN      
        1 markkvrprl iaelarrvra lreqrerprd svryaldyet lmrphsgrkl pmrawidvrr
       61 esrllqllgr lpffglgrlv trkswlwqhd epcywrltrv rpdytaqnld hgkawgiltf
      121 kgkteseare ieqvmyhdwr lvpkheeeaf tsftpapeet prpvpyppll ramilaerqk
      181 ngdpsteepm lslerirtdp wdypenqeak kktkgtav
//
LOCUS       XP_061008504             169 aa            linear   MAM 02-DEC-2023
DEFINITION  nucleoside diphosphate kinase 3 [Dama dama].
ACCESSION   XP_061008504
VERSION     XP_061008504.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152521.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..169
                     /product="nucleoside diphosphate kinase 3"
                     /calculated_mol_wt=18934
     Region          22..151
                     /region_name="NDPk_I"
                     /note="Nucleoside diphosphate kinase Group I
                     (NDPk_I)-like: NDP kinase domains are present in a large
                     family of structurally and functionally conserved proteins
                     from bacteria to humans that generally catalyze the
                     transfer of gamma-phosphates of a nucleoside...; cd04413"
                     /db_xref="CDD:239876"
     Site            order(29,69,77,105,111,122,132,135,137..138,146)
                     /site_type="active"
                     /db_xref="CDD:239876"
     Site            order(33,38..40,43,46,55..57)
                     /site_type="other"
                     /note="multimer interface [polypeptide binding]"
                     /db_xref="CDD:239876"
     CDS             1..169
                     /gene="NME3"
                     /coded_by="XM_061152521.1:41..550"
                     /db_xref="GeneID:133063318"
ORIGIN      
        1 miclmltifa nlfpaaytgv hertflavkp dgvqrrlvge ivrrferkgf klvalklvqa
       61 seellrehya elrerpffgr lvkymgsgpv vamvwqgldv vrasraliga tnpadaapgt
      121 irgdfcievg knvihgsdsv esarreialw frtdellcwe dsaghwlye
//
LOCUS       XP_061008505             372 aa            linear   MAM 02-DEC-2023
DEFINITION  probable crossover junction endonuclease EME2 isoform X1 [Dama
            dama].
ACCESSION   XP_061008505
VERSION     XP_061008505.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152522.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..372
                     /product="probable crossover junction endonuclease EME2
                     isoform X1"
                     /calculated_mol_wt=40644
     Region          61..253
                     /region_name="XPF_nuclease_EME2"
                     /note="XPF-like nuclease domain of crossover junction
                     endonuclease EME2; cd20082"
                     /db_xref="CDD:410858"
     Site            order(172,209,213..214,217..218,220..221,225..226,228,
                     238..239,242..243,245..246,253)
                     /site_type="other"
                     /note="putative heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:410858"
     Site            order(245,253)
                     /site_type="other"
                     /note="putative nucleic acid substrate binding site
                     [nucleotide binding]"
                     /db_xref="CDD:410858"
     CDS             1..372
                     /gene="EME2"
                     /coded_by="XM_061152522.1:2..1120"
                     /db_xref="GeneID:133063319"
ORIGIN      
        1 maragpgrag garrgreqrr pptweisdsd aegpasaetp attrdpvger rpaaealrwl
       61 rpwqavrrla vlvdpavled agadtlmeal halgceprve pqrparslrw sraspdpcpr
      121 gvppevwaed ephvllllep eefvrgvvql tqvcgptcsv pwvtpespac lhlaviglda
      181 ylwsqqpraq etrqpgrpav trtngavgwp eveealvhlq lwanvdvllv aswqelsqhv
      241 caftkalaqr pfkqaqesga fpfctsgrwa agervardga glrgawwrqv rqfnrvspav
      301 adtvvsafps prllqqayma cgteqerlal ladlpvktgk gvlprrvgpd lsrriclflt
      361 ttdpdllldl gs
//
LOCUS       XP_061008506             366 aa            linear   MAM 02-DEC-2023
DEFINITION  probable crossover junction endonuclease EME2 isoform X2 [Dama
            dama].
ACCESSION   XP_061008506
VERSION     XP_061008506.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152523.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..366
                     /product="probable crossover junction endonuclease EME2
                     isoform X2"
                     /calculated_mol_wt=39983
     Region          61..247
                     /region_name="XPF_nuclease-like"
                     /note="nuclease domain of XPF/MUS81 family proteins;
                     cl41760"
                     /db_xref="CDD:425391"
     CDS             1..366
                     /gene="EME2"
                     /coded_by="XM_061152523.1:2..1102"
                     /db_xref="GeneID:133063319"
ORIGIN      
        1 maragpgrag garrgreqrr pptweisdsd aegpasaetp attrdpvger rpaaealrwl
       61 rpwqavrrla vlvdpavled agadtlmeal halgceprve pqrparslrw sraspdpcpr
      121 gvppevwaed ephvllllep eefvrgvvql tqvcgptcsv pwvtpespac lhlaviglda
      181 ylwsqqpraq etrqpgrpav trtngavgwp eveelwanvd vllvaswqel sqhvcaftka
      241 laqrpfkqaq esgafpfcts grwaagerva rdgaglrgaw wrqvrqfnrv spavadtvvs
      301 afpsprllqq aymacgteqe rlalladlpv ktgkgvlprr vgpdlsrric lfltttdpdl
      361 lldlgs
//
LOCUS       XP_061008507             345 aa            linear   MAM 02-DEC-2023
DEFINITION  SPRY domain-containing SOCS box protein 3 [Dama dama].
ACCESSION   XP_061008507
VERSION     XP_061008507.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152524.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..345
                     /product="SPRY domain-containing SOCS box protein 3"
                     /calculated_mol_wt=38050
     Region          103..285
                     /region_name="SPRY_SOCS3"
                     /note="SPRY domain in the suppressor of cytokine signaling
                     3 (SOCS3) family; cd12876"
                     /db_xref="CDD:293936"
     Region          272..309
                     /region_name="SOCS_SOCS_like"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     SOCS-like proteins. The CIS/SOCS family of proteins is
                     characterized by the presence of a C-terminal SOCS box and
                     a central SH2 domain. These intracellular proteins
                     regulate the responses of immune cells to...; cd03717"
                     /db_xref="CDD:239687"
     Site            order(272..277,283,292,298)
                     /site_type="active"
                     /note="elongin B/C interaction [active]"
                     /db_xref="CDD:239687"
     CDS             1..345
                     /gene="SPSB3"
                     /coded_by="XM_061152524.1:152..1189"
                     /db_xref="GeneID:133063320"
ORIGIN      
        1 marrprssra whfvlsaarr dadaravala gtanwgydsd gqhsdsdsdp ectslpssip
       61 savpvtgesf cdcdsqseaf cgslhtahrg rdcrcgeede yfdwvwddln kssatllscd
      121 nrkvsfhmey scgtaairgt kelgegqhfw eikmtspvyg tdmmvgigts dvdldkyhht
      181 fcsllgrded swglsytgll hhkgdktsfs srfgqgsiig vhldtwhgtl tffknrkcig
      241 vaatqlqnkr fypmvcstaa kssmkvirsc asvtslqylc cyrlrqlrpg sgdtleglpl
      301 ppglkqvlhh klgwvlsmsr qppapspaas gpeprhcqrk rcrrt
//
LOCUS       XP_061008508             611 aa            linear   MAM 02-DEC-2023
DEFINITION  insulin-like growth factor-binding protein complex acid labile
            subunit isoform X1 [Dama dama].
ACCESSION   XP_061008508
VERSION     XP_061008508.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152525.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..611
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..611
                     /product="insulin-like growth factor-binding protein
                     complex acid labile subunit isoform X1"
                     /calculated_mol_wt=65894
     Region          45..83
                     /region_name="LRRNT"
                     /note="Leucine rich repeat N-terminal domain; smart00013"
                     /db_xref="CDD:214470"
     Region          62..83
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          84..104
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          90..541
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          105..128
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          129..152
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          153..176
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          177..200
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          201..224
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          225..248
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          249..272
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          273..320
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          321..344
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          345..368
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          369..390
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          393..414
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          417..440
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          441..464
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          465..486
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          489..512
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..611
                     /gene="IGFALS"
                     /coded_by="XM_061152525.1:423..2258"
                     /db_xref="GeneID:133063321"
ORIGIN      
        1 maprraplpa gglalvvllv swaalgpcgl egveptapad pegpqcpavc scghddhtde
       61 lnvfcssrnl trlpgglppg tkalwldgnn fssipaaafr nlsglgflnl qgsglaslep
      121 qallglrglc hlhlehnrlr alaahtflht pglaslglsn nllsrldegl frglahlwdl
      181 nlgwnslavl pdtafqglag lrelvlagnk laylqpalfc glgelreldl srnalrsvka
      241 nvfiklpklq klyldhnlva avapgaflgm kalrwldlsh nrvgglleds fpgllglrvl
      301 rlshnalasl rprtfkdlhf leelqlghnr lrqlpeeaft glgqlevlal nnnqlqelrp
      361 ggflgllnla vlnlsgnclr dlpeqafqgl aklhslhleg gclarlgpla faglsglrrl
      421 flkgnsiadv derslgglae lleldltanq lthlpgrlfq dlgrleylll arnrlsalpv
      481 dalgplkrtf wldishnhle mlptavlapl shlrflslqn nslrtfvpqp pglerlwleg
      541 npwdcgcalg alwafalqqp asvprfvqal aegdddrqpp vltynnitca sppglagldl
      601 rdvgeahfah c
//
LOCUS       XP_061008510             606 aa            linear   MAM 02-DEC-2023
DEFINITION  insulin-like growth factor-binding protein complex acid labile
            subunit isoform X2 [Dama dama].
ACCESSION   XP_061008510
VERSION     XP_061008510.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152527.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..606
                     /product="insulin-like growth factor-binding protein
                     complex acid labile subunit isoform X2"
                     /calculated_mol_wt=65444
     Region          40..78
                     /region_name="LRRNT"
                     /note="Leucine rich repeat N-terminal domain; smart00013"
                     /db_xref="CDD:214470"
     Region          57..78
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          79..99
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          85..536
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          100..123
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          124..147
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          148..171
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          172..195
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          196..219
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          220..243
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          244..267
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          268..315
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          316..339
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          340..363
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          364..385
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          388..409
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          412..459
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          460..481
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          484..507
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..606
                     /gene="IGFALS"
                     /coded_by="XM_061152527.1:425..2245"
                     /db_xref="GeneID:133063321"
ORIGIN      
        1 maprrgglal vvllvswaal gpcglegvep tapadpegpq cpavcscghd dhtdelnvfc
       61 ssrnltrlpg glppgtkalw ldgnnfssip aaafrnlsgl gflnlqgsgl aslepqallg
      121 lrglchlhle hnrlralaah tflhtpglas lglsnnllsr ldeglfrgla hlwdlnlgwn
      181 slavlpdtaf qglaglrelv lagnklaylq palfcglgel reldlsrnal rsvkanvfik
      241 lpklqklyld hnlvaavapg aflgmkalrw ldlshnrvgg lledsfpgll glrvlrlshn
      301 alaslrprtf kdlhfleelq lghnrlrqlp eeaftglgql evlalnnnql qelrpggflg
      361 llnlavlnls gnclrdlpeq afqglaklhs lhleggclar lgplafagls glrrlflkgn
      421 siadvdersl gglaelleld ltanqlthlp grlfqdlgrl eylllarnrl salpvdalgp
      481 lkrtfwldis hnhlemlpta vlaplshlrf lslqnnslrt fvpqppgler lwlegnpwdc
      541 gcalgalwaf alqqpasvpr fvqalaegdd drqppvltyn nitcasppgl agldlrdvge
      601 ahfahc
//
LOCUS       XP_061008511             272 aa            linear   MAM 02-DEC-2023
DEFINITION  cytosolic Fe-S cluster assembly factor NUBP2 isoform X1 [Dama
            dama].
ACCESSION   XP_061008511
VERSION     XP_061008511.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152528.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..272
                     /product="cytosolic Fe-S cluster assembly factor NUBP2
                     isoform X1"
                     /calculated_mol_wt=28950
     Region          12..264
                     /region_name="ParA"
                     /note="NUBPL iron-transfer P-loop NTPase; pfam10609"
                     /db_xref="CDD:431392"
     Site            order(23..30,164,166,191..192,228..230,233..234)
                     /site_type="active"
                     /db_xref="CDD:349757"
     Site            order(23..25,55..56,58,61..62,107..108,138,140,143,170,
                     173,229,231..232,234)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:349757"
     CDS             1..272
                     /gene="NUBP2"
                     /coded_by="XM_061152528.1:61..879"
                     /db_xref="GeneID:133063322"
ORIGIN      
        1 meavaepgnl agvryivlvl sgkggvgkst istelalalr hagkkqvgil dvdlcgpsip
       61 rmlrvqgrav hqgdsgwvpv fvdreqsisl msvgflleqp dealvwrgpr knalikqfvs
      121 dvawgqldyl vvdtppgtsd ehmavvdalr pysplgalvv ttpqavsvgd vrreltfcrk
      181 vglrviglve nmsgfvcphc sectnvfskg ggeelarhag vpflgsvpld peltrsledg
      241 rdfiqdfpds pafpalssia qkilsetpvg ls
//
LOCUS       XP_061008512             271 aa            linear   MAM 02-DEC-2023
DEFINITION  cytosolic Fe-S cluster assembly factor NUBP2 isoform X2 [Dama
            dama].
ACCESSION   XP_061008512
VERSION     XP_061008512.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152529.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..271
                     /product="cytosolic Fe-S cluster assembly factor NUBP2
                     isoform X2"
                     /calculated_mol_wt=28822
     Region          12..263
                     /region_name="ParA"
                     /note="NUBPL iron-transfer P-loop NTPase; pfam10609"
                     /db_xref="CDD:431392"
     Site            order(23..30,163,165,190..191,227..229,232..233)
                     /site_type="active"
                     /db_xref="CDD:349757"
     Site            order(23..25,54..55,57,60..61,106..107,137,139,142,169,
                     172,228,230..231,233)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:349757"
     CDS             1..271
                     /gene="NUBP2"
                     /coded_by="XM_061152529.1:61..876"
                     /db_xref="GeneID:133063322"
ORIGIN      
        1 meavaepgnl agvryivlvl sgkggvgkst istelalalr hagkkvgild vdlcgpsipr
       61 mlrvqgravh qgdsgwvpvf vdreqsislm svgflleqpd ealvwrgprk nalikqfvsd
      121 vawgqldylv vdtppgtsde hmavvdalrp ysplgalvvt tpqavsvgdv rreltfcrkv
      181 glrviglven msgfvcphcs ectnvfskgg geelarhagv pflgsvpldp eltrsledgr
      241 dfiqdfpdsp afpalssiaq kilsetpvgl s
//
LOCUS       XP_061008513             225 aa            linear   MAM 02-DEC-2023
DEFINITION  cytosolic Fe-S cluster assembly factor NUBP2 isoform X3 [Dama
            dama].
ACCESSION   XP_061008513
VERSION     XP_061008513.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152530.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..225
                     /product="cytosolic Fe-S cluster assembly factor NUBP2
                     isoform X3"
                     /calculated_mol_wt=23658
     Region          12..>116
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     CDS             1..225
                     /gene="NUBP2"
                     /coded_by="XM_061152530.1:61..738"
                     /db_xref="GeneID:133063322"
ORIGIN      
        1 meavaepgnl agvryivlvl sgkggvgkst istelalalr hagkkqvgil dvdlcgpsip
       61 rmlrvqgrav hqgdsgwvpv fvdreqsisl msvgflleqp dealvwrgpr knggvrggre
      121 agadllqegg aagdrargeh erlclspllg vhqrllqgrr rgagktrrrp lpglgasgpr
      181 anaepggrpg lhpglprqpr vpcallhrpe dsqrdargal ltkag
//
LOCUS       XP_061008514             308 aa            linear   MAM 02-DEC-2023
DEFINITION  hydroxyacylglutathione hydrolase, mitochondrial isoform X1 [Dama
            dama].
ACCESSION   XP_061008514
VERSION     XP_061008514.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152531.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..308
                     /product="hydroxyacylglutathione hydrolase, mitochondrial
                     isoform X1"
                     /calculated_mol_wt=33846
     Region          49..304
                     /region_name="PLN02469"
                     /note="hydroxyacylglutathione hydrolase"
                     /db_xref="CDD:178088"
     CDS             1..308
                     /gene="HAGH"
                     /coded_by="XM_061152531.1:56..982"
                     /db_xref="GeneID:133063323"
ORIGIN      
        1 mvlgrgllgc wsvaelgaac arlglgpall gslyhlglrk sltvdqgamk vellpaltdn
       61 ymyllidedt keaaivdpvq pqkvvetvrk hgvklttvlt thhhwdhagg neklvklepg
      121 lkvyggddri galthkvthl stlqvgslsv kclstpchts ghicyfvtkp nspeppavft
      181 gdtlfvagcg kfyegtadem ykallevlgr lppdtrvycg heytinnlkf arhvepnnta
      241 iqeklawake kysigeptvp stiaeeftyn pfmrvrektv qqhagetdpv ttmrairkek
      301 dqfkvprd
//
LOCUS       XP_061008515             260 aa            linear   MAM 02-DEC-2023
DEFINITION  hydroxyacylglutathione hydrolase, mitochondrial isoform X2 [Dama
            dama].
ACCESSION   XP_061008515
VERSION     XP_061008515.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152532.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..260
                     /product="hydroxyacylglutathione hydrolase, mitochondrial
                     isoform X2"
                     /calculated_mol_wt=28998
     Region          1..256
                     /region_name="PLN02469"
                     /note="hydroxyacylglutathione hydrolase"
                     /db_xref="CDD:178088"
     CDS             1..260
                     /gene="HAGH"
                     /coded_by="XM_061152532.1:332..1114"
                     /db_xref="GeneID:133063323"
ORIGIN      
        1 mkvellpalt dnymyllide dtkeaaivdp vqpqkvvetv rkhgvklttv ltthhhwdha
       61 ggneklvkle pglkvyggdd rigalthkvt hlstlqvgsl svkclstpch tsghicyfvt
      121 kpnspeppav ftgdtlfvag cgkfyegtad emykallevl grlppdtrvy cgheytinnl
      181 kfarhvepnn taiqeklawa kekysigept vpstiaeeft ynpfmrvrek tvqqhagetd
      241 pvttmrairk ekdqfkvprd
//
LOCUS       XP_061008516             221 aa            linear   MAM 02-DEC-2023
DEFINITION  acylpyruvase FAHD1, mitochondrial [Dama dama].
ACCESSION   XP_061008516
VERSION     XP_061008516.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152533.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..221
                     /product="acylpyruvase FAHD1, mitochondrial"
                     /calculated_mol_wt=24366
     Region          16..216
                     /region_name="YcgM"
                     /note="2-keto-4-pentenoate
                     hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase
                     (catechol pathway) [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG0179"
                     /db_xref="CDD:439949"
     CDS             1..221
                     /gene="FAHD1"
                     /coded_by="XM_061152533.1:259..924"
                     /db_xref="GeneID:133063324"
ORIGIN      
        1 maagrpmsrf wewgknivcv grnyadhvre mqsavpsepv lflkpstaya pegspvlvpa
       61 ytrnlhhele lavvmgkrcr avpeaaamdy vagyalcldm tardvqdeck kkglpwtlak
      121 sftascpvsa fvpkekipdp hnlklwlkvn gelrqegets smifsipyii syvskimtle
      181 egdiiltgtp kgvgpvkend eiqagihgvl smkfkvekpe y
//
LOCUS       XP_061008517             342 aa            linear   MAM 02-DEC-2023
DEFINITION  heparan sulfate glucosamine 3-O-sulfotransferase 6 [Dama dama].
ACCESSION   XP_061008517
VERSION     XP_061008517.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152534.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..342
                     /product="heparan sulfate glucosamine 3-O-sulfotransferase
                     6"
                     /calculated_mol_wt=37107
     Region          91..326
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; pfam00685"
                     /db_xref="CDD:425820"
     CDS             1..342
                     /gene="HS3ST6"
                     /coded_by="XM_061152534.1:1..1029"
                     /db_xref="GeneID:133063325"
ORIGIN      
        1 magsgglagg aggsqgtagg pgaalrasra pllfavlvlg syclcalpgr cppagrvpap
       61 aparaepprv srspgapglp vasgsgrrrf pqalivgvkk ggtrallefl rlhpdiralg
      121 sephffdrcy erglawyrsl mprtldgqit lektpsyfvt reaprrihsm spatklivvv
      181 rnpvtraisd yaqtlsktpg lpsfgtlafr rglgpvdtaw savriglyaq hldnwlryfp
      241 lsrflfvsge rlvsdpagel grvqdflglr rvvtdkhfyf natkgfpclk kaqgsgrprc
      301 lgkskgrphp rvpeavvqrl rafyrpfnrk fyqmtgqdfg wd
//
LOCUS       XP_061008519             116 aa            linear   MAM 02-DEC-2023
DEFINITION  methionine-R-sulfoxide reductase B1 [Dama dama].
ACCESSION   XP_061008519
VERSION     XP_061008519.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152536.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..116
                     /product="methionine-R-sulfoxide reductase B1"
                     /calculated_mol_wt=12688
     Region          <7..108
                     /region_name="SelR"
                     /note="SelR domain; cl15841"
                     /db_xref="CDD:472838"
     CDS             1..116
                     /gene="MSRB1"
                     /coded_by="XM_061152536.1:139..489"
                     /db_xref="GeneID:133063326"
ORIGIN      
        1 msfcsffgge ifqnhfepgi yvcakcgyel fssrskyahs spwpafteti hadsvakrpe
       61 hnrpgaikvs cgrcgnglgh eflndgpkrg qsrfuifsss lkfipkgeet sasqgq
//
LOCUS       XP_061008520             816 aa            linear   MAM 02-DEC-2023
DEFINITION  transducin beta-like protein 3 [Dama dama].
ACCESSION   XP_061008520
VERSION     XP_061008520.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152537.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..816
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..816
                     /product="transducin beta-like protein 3"
                     /calculated_mol_wt=89363
     Region          83..120
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          86..607
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          125..161
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          170..206
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          212..258
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          263..299
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          351..387
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          392..431
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          439..489
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          495..531
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          537..573
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          579..603
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <589..>645
                     /region_name="PLN00181"
                     /note="protein SPA1-RELATED; Provisional"
                     /db_xref="CDD:177776"
     Region          621..647
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          667..799
                     /region_name="Utp13"
                     /note="Utp13 specific WD40 associated domain; pfam08625"
                     /db_xref="CDD:462540"
     CDS             1..816
                     /gene="TBL3"
                     /coded_by="XM_061152537.1:71..2521"
                     /db_xref="GeneID:133063327"
ORIGIN      
        1 mahgspsrgg tgdmaevaag vgrfksnyav erkiepfykg gkvqldqtgq hlfcvcgtrv
       61 nildvasgav lrsleqedqe ditafdlspd dkvlvtasra lllaqwawqe gsvtrlwkai
      121 htapvatmaf dptstllatg gcdgavrvwd vvryygthhf rgspgvvhlv afhpdparll
      181 lfssaadtsv rvwslqersc lavltahysa vtsltfsadg htmlssgrdk icvvwdlrsl
      241 qatrtvpvfe sveaavllpe epapelgvks aglhfltagd qgtlrvweva sgrcvhaqqr
      301 lpgpgrelth ctlaraagll lsvtadhnll lydarslqlw kqfagyseev ldvrflgped
      361 shvvvasnsp clkvfdlqts acqilhghtd iilaldvfrk grlfascakd qsirlwrmnk
      421 agevacvahg sghthsvgti ccsrlketfl vtgsqdctvk fwplpealls kgtgpeggpv
      481 llqaqatqrc hdkdinsvav apndkllatg sqdrtaklwa lpqcqllgvf sghrrglwcv
      541 qfspmdqvla tasadgtvkl walqdfsclk tfeghdasvl kvafvsrgtq llssgsdgll
      601 klwtiknnec vrtldahedk vwglhcsrld draltgasds cvvlwkdvte aeqaeeqakk
      661 eeqvvkqqel dnllhekryl ralglaisld rphtvltviq airrdpesce klettvlrlr
      721 rdqkeallrf cvtwntnsrh cheaqavlgv llrheapdel laydgvrasl egllpyterh
      781 fqrlsrmlqa atfldflwhn mklptlpaat tapaal
//
LOCUS       XP_061008521             362 aa            linear   MAM 02-DEC-2023
DEFINITION  NADPH oxidase organizer 1 isoform X1 [Dama dama].
ACCESSION   XP_061008521
VERSION     XP_061008521.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152538.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..362
                     /product="NADPH oxidase organizer 1 isoform X1"
                     /calculated_mol_wt=39298
     Region          3..124
                     /region_name="PX_domain"
                     /note="The Phox Homology domain, a phosphoinositide
                     binding module; cl02563"
                     /db_xref="CDD:470617"
     Site            order(42..44,77..78,93)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132768"
     Region          163..218
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
     Site            order(168,170,173,179,197..198,212,214..215)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212956"
     Region          237..288
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
     Site            order(242,244,247,251,269..270,283,285..286)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212957"
     CDS             1..362
                     /gene="NOXO1"
                     /coded_by="XM_061152538.1:249..1337"
                     /db_xref="GeneID:133063328"
ORIGIN      
        1 magarhpvcv sgaalvqter lqqmfafsvc wsddsdsfvr rswedfrklh ktlketfpve
       61 agllrrsdrv lpklpadapw lvhrgrtsrg larlqlleay lrallaager vsrspvltgf
      121 lapqpadlep mlppgslvil pplqepppgp sgspairtle aqslrclqpf stqdtrgqpf
      181 htqaqealdv llrhpsgwwl vanedqqmaw fpapyleeva phqgqgggqp lgingpqfca
      241 vrayessrad elsvpagarv rvleasdrgw wlcrfrgrtg llpaatlqrd glgtllsgpw
      301 lhhgagtaeg gegkahgspr spqaamlppp vptrpplsti qsrcctitrk alqrdpgrqg
      361 al
//
LOCUS       XP_061008522             361 aa            linear   MAM 02-DEC-2023
DEFINITION  NADPH oxidase organizer 1 isoform X2 [Dama dama].
ACCESSION   XP_061008522
VERSION     XP_061008522.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152539.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..361
                     /product="NADPH oxidase organizer 1 isoform X2"
                     /calculated_mol_wt=39170
     Region          3..123
                     /region_name="PX_domain"
                     /note="The Phox Homology domain, a phosphoinositide
                     binding module; cl02563"
                     /db_xref="CDD:470617"
     Site            order(41..43,76..77,92)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132768"
     Region          162..217
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
     Site            order(167,169,172,178,196..197,211,213..214)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212956"
     Region          236..287
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
     Site            order(241,243,246,250,268..269,282,284..285)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212957"
     CDS             1..361
                     /gene="NOXO1"
                     /coded_by="XM_061152539.1:247..1332"
                     /db_xref="GeneID:133063328"
ORIGIN      
        1 magarhpvcv sgaalvqter lqmfafsvcw sddsdsfvrr swedfrklhk tlketfpvea
       61 gllrrsdrvl pklpadapwl vhrgrtsrgl arlqlleayl rallaagerv srspvltgfl
      121 apqpadlepm lppgslvilp plqepppgps gspairtlea qslrclqpfs tqdtrgqpfh
      181 tqaqealdvl lrhpsgwwlv anedqqmawf papyleevap hqgqgggqpl gingpqfcav
      241 rayessrade lsvpagarvr vleasdrgww lcrfrgrtgl lpaatlqrdg lgtllsgpwl
      301 hhgagtaegg egkahgsprs pqaamlpppv ptrpplstiq srcctitrka lqrdpgrqga
      361 l
//
LOCUS       XP_061008523             324 aa            linear   MAM 02-DEC-2023
DEFINITION  NADPH oxidase organizer 1 isoform X3 [Dama dama].
ACCESSION   XP_061008523
VERSION     XP_061008523.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152540.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..324
                     /product="NADPH oxidase organizer 1 isoform X3"
                     /calculated_mol_wt=35123
     Region          3..124
                     /region_name="PX_domain"
                     /note="The Phox Homology domain, a phosphoinositide
                     binding module; cl02563"
                     /db_xref="CDD:470617"
     Site            order(42..44,77..78,93)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132768"
     Region          163..>197
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
     Region          199..250
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
     Site            order(204,206,209,213,231..232,245,247..248)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212957"
     CDS             1..324
                     /gene="NOXO1"
                     /coded_by="XM_061152540.1:251..1225"
                     /db_xref="GeneID:133063328"
ORIGIN      
        1 magarhpvcv sgaalvqter lqqmfafsvc wsddsdsfvr rswedfrklh ktlketfpve
       61 agllrrsdrv lpklpadapw lvhrgrtsrg larlqlleay lrallaager vsrspvltgf
      121 lapqpadlep mlppgslvil pplqepppgp sgspairtle aqslrclqpf stqdtrgqpf
      181 htqaqealdv llrhpsgpqf cavrayessr adelsvpaga rvrvleasdr gwwlcrfrgr
      241 tgllpaatlq rdglgtllsg pwlhhgagta eggegkahgs prspqaamlp ppvptrppls
      301 tiqsrcctit rkalqrdpgr qgal
//
LOCUS       XP_061008524             293 aa            linear   MAM 02-DEC-2023
DEFINITION  small ribosomal subunit protein uS5 [Dama dama].
ACCESSION   XP_061008524
VERSION     XP_061008524.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152541.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..293
                     /product="small ribosomal subunit protein uS5"
                     /calculated_mol_wt=31104
     Region          54..273
                     /region_name="PTZ00070"
                     /note="40S ribosomal protein S2; Provisional"
                     /db_xref="CDD:240255"
     CDS             1..293
                     /gene="RPS2"
                     /coded_by="XM_061152541.1:23..904"
                     /db_xref="GeneID:133063329"
ORIGIN      
        1 maddagaagg pggpggpgmg grggfrggfg sgvrgrgrgr grgrgrgrga rggkaedkew
       61 lpvtklgrlv kdmkikslee iylfslpike seiidfflga slkdevlkim pvqkqtragq
      121 rtrfkafvai gdynghvglg vkcskevata irgaiilakl sivpvrrgyw gnkigkphtv
      181 pckvtgrcgs vlvrlipapr gtgivsapvp kkllmmagid dcytsargct atlgnfakat
      241 fdaisktysy ltpdlwketv ftkspyqeft dhlvkthtrv svqrtqapav att
//
LOCUS       XP_061008525             261 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: RING finger protein 151 [Dama dama].
ACCESSION   XP_061008525
VERSION     XP_061008525.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152542.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..261
                     /product="LOW QUALITY PROTEIN: RING finger protein 151"
                     /calculated_mol_wt=29037
     Region          34..82
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(39,42,54,56,59,62,73,76)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     Region          91..>163
                     /region_name="Sina"
                     /note="Seven in absentia protein family; pfam03145"
                     /db_xref="CDD:460824"
     CDS             1..261
                     /gene="RNF151"
                     /coded_by="XM_061152542.1:1358..2143"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon"
                     /db_xref="GeneID:133063330"
ORIGIN      
        1 mkwrllspgf sgaavqtqim sggydlnlft sppdcnflcs vchgvlktpv rlpcshifck
       61 kcilrwlsrq ktcpccrkev rrrkivhvnk lqkiigrlev kcrnaeagcq vtcplahrkg
      121 hqdscpfelm vcpnegctlr vprgalaehr qncqhgahqr cslgcgatlg paeranhncy
      181 qelreawcqr qqrsrtlvlc llrhlrkmhr ttglirrqla efleeddpll vgapqeeaea
      241 tpegsigaev xggpraklpc k
//
LOCUS       XP_061008527             176 aa            linear   MAM 02-DEC-2023
DEFINITION  NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 [Dama
            dama].
ACCESSION   XP_061008527
VERSION     XP_061008527.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152544.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..176
                     /product="NADH dehydrogenase [ubiquinone] 1 beta
                     subcomplex subunit 10"
                     /calculated_mol_wt=20763
     Region          42..164
                     /region_name="NDUFB10"
                     /note="NADH-ubiquinone oxidoreductase subunit 10;
                     pfam10249"
                     /db_xref="CDD:431170"
     CDS             1..176
                     /gene="NDUFB10"
                     /coded_by="XM_061152544.1:94..624"
                     /db_xref="GeneID:133063331"
ORIGIN      
        1 mpdswdkdvy pepprrtpap spqtslpnpi tyltkafdll vdrpvtlvre fiegqhaknk
       61 yyyyhrefrr vpditecqek dvlcmfeaem qwrrdykvdq eivniiqerl kacqqreges
      121 hrqncakele qftqvvkayq dryhdlgahy sarkclakqk rrmlaerkaa keaaaa
//
LOCUS       XP_061008528             931 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase ZNF598 isoform X1 [Dama dama].
ACCESSION   XP_061008528
VERSION     XP_061008528.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152545.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..931
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..931
                     /product="E3 ubiquitin-protein ligase ZNF598 isoform X1"
                     /calculated_mol_wt=101132
     Region          32..>273
                     /region_name="COG5236"
                     /note="Uncharacterized conserved protein, contains RING
                     Zn-finger [General function prediction only]"
                     /db_xref="CDD:227561"
     Region          <398..>661
                     /region_name="PRK07003"
                     /note="DNA polymerase III subunit gamma/tau"
                     /db_xref="CDD:235906"
     CDS             1..931
                     /gene="ZNF598"
                     /coded_by="XM_061152545.1:13..2808"
                     /db_xref="GeneID:133063332"
ORIGIN      
        1 maaaaaagpe grhaaqeaaa aaaaperggg scvlccgdle atalgrcdhp vcyrcstkmr
       61 vlceqrycav creelrqvvf gktlpafati plhqlqhekk ydiyfmdgrv falyrqllqh
      121 ecprcperpp fslfgdleqh mrkqhelfcc klclrhlqif therkwysrk dlarhrmqgd
      181 pddtshrghp lckfcderyl dndellkhlr rdhyfchfcd adgaqdyysd yaylrehfre
      241 khflceegrc steqfthafr teidlkahrt achsrsraea rqnrqidlqf syaprhsrrn
      301 egviggedye eldrynrqgr tgrasgrgaq qsrrgswryk reeedrevaa airasvaaqq
      361 qqqqqethrt edqeeggrpk keetglrgpe eacgprrpar tpgegpgeql pcrqahpgpt
      421 grtqapdnka gpkeasangp vnqdtfsttg paagatlpna lppptsklkd edfpslcasa
      481 lssssaaaap gpvglalays vsargrttfq eedfpalvps askpssapts lisawnsgas
      541 kkvahpapgs qstsggsqpp rksgkggkgg kkggpspaee aeedgraglt tqelrsvptt
      601 vavssllaga atqtftkagk kkkvgseksg aasppppdre gppgaelapt appgraegpa
      661 avivnghseg paparstpke ppglprplgp ppcptpqedf palcgpcppr mppppgfntv
      721 vllkgtpppp glappvskpp pgfsslpssp hpacvpsttt ttkaprptpv praylvpenf
      781 rernlqliqs irdflqcdea rfskfksysg efrqgvisaa qyykscrdll genfekifne
      841 llvllpdtak qqelllahtd frgrekppgt kakknrksaw qastqqvgld ccvcptcqqv
      901 lahgdvgshq alhaardddf pslqalaril t
//
LOCUS       XP_061008529             928 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase ZNF598 isoform X2 [Dama dama].
ACCESSION   XP_061008529
VERSION     XP_061008529.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152546.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..928
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..928
                     /product="E3 ubiquitin-protein ligase ZNF598 isoform X2"
                     /calculated_mol_wt=100685
     Region          32..>341
                     /region_name="COG5236"
                     /note="Uncharacterized conserved protein, contains RING
                     Zn-finger [General function prediction only]"
                     /db_xref="CDD:227561"
     Region          <395..>658
                     /region_name="PRK07003"
                     /note="DNA polymerase III subunit gamma/tau"
                     /db_xref="CDD:235906"
     CDS             1..928
                     /gene="ZNF598"
                     /coded_by="XM_061152546.1:13..2799"
                     /db_xref="GeneID:133063332"
ORIGIN      
        1 maaaaaagpe grhaaqeaaa aaaaperggg scvlccgdle atalgrcdhp vcyrcstkmr
       61 vlceqrycav creelrqvvf gktlpafati plhqlqhekk ydiyfmdgrv falyrqllqh
      121 ecprcperpp fslfgdleqh mrkqhelfcc klclrhlqif therkwysrk dlarhrmqgd
      181 pddtshrghp lckfcderyl dndellkhlr rdhyfchfcd adgaqdyysd yaylrehfre
      241 khflceegrc steqfthafr teidlkahrt achsrsraea rqnrqidlqf syaprhsrrn
      301 egviggedye eldrynrqgr tgrasgrgaq qsrrgswree edrevaaair asvaaqqqqq
      361 qqethrtedq eeggrpkkee tglrgpeeac gprrpartpg egpgeqlpcr qahpgptgrt
      421 qapdnkagpk easangpvnq dtfsttgpaa gatlpnalpp ptsklkdedf pslcasalss
      481 ssaaaapgpv glalaysvsa rgrttfqeed fpalvpsask pssaptslis awnsgaskkv
      541 ahpapgsqst sggsqpprks gkggkggkkg gpspaeeaee dgraglttqe lrsvpttvav
      601 ssllagaatq tftkagkkkk vgseksgaas ppppdregpp gaelaptapp graegpaavi
      661 vnghsegpap arstpkeppg lprplgpppc ptpqedfpal cgpcpprmpp ppgfntvvll
      721 kgtppppgla ppvskpppgf sslpssphpa cvpstttttk aprptpvpra ylvpenfrer
      781 nlqliqsird flqcdearfs kfksysgefr qgvisaaqyy kscrdllgen fekifnellv
      841 llpdtakqqe lllahtdfrg rekppgtkak knrksawqas tqqvgldccv cptcqqvlah
      901 gdvgshqalh aardddfpsl qalarilt
//
LOCUS       XP_061008530             907 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase ZNF598 isoform X3 [Dama dama].
ACCESSION   XP_061008530
VERSION     XP_061008530.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152547.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..907
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..907
                     /product="E3 ubiquitin-protein ligase ZNF598 isoform X3"
                     /calculated_mol_wt=98620
     Region          32..>273
                     /region_name="COG5236"
                     /note="Uncharacterized conserved protein, contains RING
                     Zn-finger [General function prediction only]"
                     /db_xref="CDD:227561"
     Region          <495..>754
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     CDS             1..907
                     /gene="ZNF598"
                     /coded_by="XM_061152547.1:13..2736"
                     /db_xref="GeneID:133063332"
ORIGIN      
        1 maaaaaagpe grhaaqeaaa aaaaperggg scvlccgdle atalgrcdhp vcyrcstkmr
       61 vlceqrycav creelrqvvf gktlpafati plhqlqhekk ydiyfmdgrv falyrqllqh
      121 ecprcperpp fslfgdleqh mrkqhelfcc klclrhlqif therkwysrk dlarhrmqgd
      181 pddtshrghp lckfcderyl dndellkhlr rdhyfchfcd adgaqdyysd yaylrehfre
      241 khflceegrc steqfthafr teidlkahrt achsrsraea rqnrqidlqf syaprhsrrn
      301 egviggedye eldrynrqgr tgrasgrgaq qsrrgswryk reeedrevaa airasvaaqq
      361 qqqqqethrt edqeeggrpk keetglrgpe eacgprrpar tpgegpgpke asangpvnqd
      421 tfsttgpaag atlpnalppp tsklkdedfp slcasalsss saaaapgpvg lalaysvsar
      481 grttfqeedf palvpsaskp ssaptslisa wnsgaskkva hpapgsqsts ggsqpprksg
      541 kggkggkkgg pspaeeaeed graglttqel rsvpttvavs sllagaatqt ftkagkkkkv
      601 gseksgaasp pppdregppg aelaptappg raegpaaviv nghsegpapa rstpkeppgl
      661 prplgpppcp tpqedfpalc gpcpprmppp pgfntvvllk gtppppglap pvskpppgfs
      721 slpssphpac vpstttttka prptpvpray lvpenfrern lqliqsirdf lqcdearfsk
      781 fksysgefrq gvisaaqyyk scrdllgenf ekifnellvl lpdtakqqel llahtdfrgr
      841 ekppgtkakk nrksawqast qqvgldccvc ptcqqvlahg dvgshqalha ardddfpslq
      901 alarilt
//
LOCUS       XP_061008531             904 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase ZNF598 isoform X4 [Dama dama].
ACCESSION   XP_061008531
VERSION     XP_061008531.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152548.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..904
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..904
                     /product="E3 ubiquitin-protein ligase ZNF598 isoform X4"
                     /calculated_mol_wt=98376
     Region          32..>273
                     /region_name="COG5236"
                     /note="Uncharacterized conserved protein, contains RING
                     Zn-finger [General function prediction only]"
                     /db_xref="CDD:227561"
     Region          <398..>661
                     /region_name="PRK07003"
                     /note="DNA polymerase III subunit gamma/tau"
                     /db_xref="CDD:235906"
     CDS             1..904
                     /gene="ZNF598"
                     /coded_by="XM_061152548.1:13..2727"
                     /db_xref="GeneID:133063332"
ORIGIN      
        1 maaaaaagpe grhaaqeaaa aaaaperggg scvlccgdle atalgrcdhp vcyrcstkmr
       61 vlceqrycav creelrqvvf gktlpafati plhqlqhekk ydiyfmdgrv falyrqllqh
      121 ecprcperpp fslfgdleqh mrkqhelfcc klclrhlqif therkwysrk dlarhrmqgd
      181 pddtshrghp lckfcderyl dndellkhlr rdhyfchfcd adgaqdyysd yaylrehfre
      241 khflceegrc steqfthafr teidlkahrt achsrsraea rqnrqidlqf syaprhsrrn
      301 egviggedye eldrynrqgr tgrasgrgaq qsrrgswryk reeedrevaa airasvaaqq
      361 qqqqqethrt edqeeggrpk keetglrgpe eacgprrpar tpgegpgeql pcrqahpgpt
      421 grtqapdnka gpkeasangp vnqdtfsttg paagatlpna lppptsklkd edfpslcasa
      481 lssssaaaap gpvglalays vsargrttfq eedfpalvps askpssapts lisawnsgas
      541 kkvahpapgs qstsggsqpp rksgkggkgg kkggpspaee aeedgraglt tqelrsvptt
      601 vavssllaga atqtftkagk kkkvgseksg aasppppdre gppgaelapt appgraegpa
      661 avivnghseg paparstpke ppglprplgp ppcptpqedf palcgpcppr mppppgfntv
      721 vllkgtpppp glappvskpp pgfsslpssp hpacvpsttt ttkaprptpv praylvpenf
      781 rernlqliqs irdflqcdea rfskfksysg efrqgvisaa qyykscrdll genfekifne
      841 llvllpdtak qqelllahtd frgrekppgt kakknrksaw qastqqgcee atcvpyhmee
      901 aphs
//
LOCUS       XP_061008532             826 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase ZNF598 isoform X5 [Dama dama].
ACCESSION   XP_061008532
VERSION     XP_061008532.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152549.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..826
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..826
                     /product="E3 ubiquitin-protein ligase ZNF598 isoform X5"
                     /calculated_mol_wt=89849
     Region          <12..>168
                     /region_name="COG5236"
                     /note="Uncharacterized conserved protein, contains RING
                     Zn-finger [General function prediction only]"
                     /db_xref="CDD:227561"
     Region          <293..>556
                     /region_name="PRK07003"
                     /note="DNA polymerase III subunit gamma/tau"
                     /db_xref="CDD:235906"
     CDS             1..826
                     /gene="ZNF598"
                     /coded_by="XM_061152549.1:439..2919"
                     /db_xref="GeneID:133063332"
ORIGIN      
        1 mdgrvfalyr qllqhecprc perppfslfg dleqhmrkqh elfccklclr hlqiftherk
       61 wysrkdlarh rmqgdpddts hrghplckfc deryldndel lkhlrrdhyf chfcdadgaq
      121 dyysdyaylr ehfrekhflc eegrcsteqf thafrteidl kahrtachsr sraearqnrq
      181 idlqfsyapr hsrrnegvig gedyeeldry nrqgrtgras grgaqqsrrg swrykreeed
      241 revaaairas vaaqqqqqqq ethrtedqee ggrpkkeetg lrgpeeacgp rrpartpgeg
      301 pgeqlpcrqa hpgptgrtqa pdnkagpkea sangpvnqdt fsttgpaaga tlpnalpppt
      361 sklkdedfps lcasalssss aaaapgpvgl alaysvsarg rttfqeedfp alvpsaskps
      421 saptslisaw nsgaskkvah papgsqstsg gsqpprksgk ggkggkkggp spaeeaeedg
      481 raglttqelr svpttvavss llagaatqtf tkagkkkkvg seksgaaspp ppdregppga
      541 elaptappgr aegpaavivn ghsegpapar stpkeppglp rplgpppcpt pqedfpalcg
      601 pcpprmpppp gfntvvllkg tppppglapp vskpppgfss lpssphpacv pstttttkap
      661 rptpvprayl vpenfrernl qliqsirdfl qcdearfskf ksysgefrqg visaaqyyks
      721 crdllgenfe kifnellvll pdtakqqell lahtdfrgre kppgtkakkn rksawqastq
      781 qvgldccvcp tcqqvlahgd vgshqalhaa rdddfpslqa larilt
//
LOCUS       XP_061008533             229 aa            linear   MAM 02-DEC-2023
DEFINITION  synaptogyrin-3 isoform X1 [Dama dama].
ACCESSION   XP_061008533
VERSION     XP_061008533.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152550.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..229
                     /product="synaptogyrin-3 isoform X1"
                     /calculated_mol_wt=24306
     Region          20..165
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     CDS             1..229
                     /gene="SYNGR3"
                     /coded_by="XM_061152550.1:116..805"
                     /db_xref="GeneID:133063333"
ORIGIN      
        1 meggsfgagr agaaldpvsf arrpqtllrv aswvfsiavf gpivnegyvn adsgpelrci
       61 fngnagacrf gvalglgafl acagfllldv rfqqissvrd rrravlldlg fsglwsflwf
      121 vgfcfltnqw qrtapgpgta qagdaaraai tfsffsilsw valtvkalqr frlgtdmslf
      181 ateqlgagag qtypgypvgs gvegtetyqs ppftetldts pkgyqvpay
//
LOCUS       XP_061008534             197 aa            linear   MAM 02-DEC-2023
DEFINITION  synaptogyrin-3 isoform X2 [Dama dama].
ACCESSION   XP_061008534
VERSION     XP_061008534.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152551.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..197
                     /product="synaptogyrin-3 isoform X2"
                     /calculated_mol_wt=21022
     Region          1..133
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     CDS             1..197
                     /gene="SYNGR3"
                     /coded_by="XM_061152551.1:173..766"
                     /db_xref="GeneID:133063333"
ORIGIN      
        1 mvfsiavfgp ivnegyvnad sgpelrcifn gnagacrfgv alglgaflac agfllldvrf
       61 qqissvrdrr ravlldlgfs glwsflwfvg fcfltnqwqr tapgpgtaqa gdaaraaitf
      121 sffsilswva ltvkalqrfr lgtdmslfat eqlgagagqt ypgypvgsgv egtetyqspp
      181 ftetldtspk gyqvpay
//
LOCUS       XP_061008535             189 aa            linear   MAM 02-DEC-2023
DEFINITION  synaptogyrin-3 isoform X3 [Dama dama].
ACCESSION   XP_061008535
VERSION     XP_061008535.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152552.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..189
                     /product="synaptogyrin-3 isoform X3"
                     /calculated_mol_wt=20335
     Region          20..161
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     CDS             1..189
                     /gene="SYNGR3"
                     /coded_by="XM_061152552.1:116..685"
                     /db_xref="GeneID:133063333"
ORIGIN      
        1 meggsfgagr agaaldpvsf arrpqtllrv aswvfsiavf gpivnegyvn adsgpelrci
       61 fngnagacrf gvalglgafl acagfllldv rfqqissvrd rrravlldlg fsglwsflwf
      121 vgfcfltnqw qrtapgpgta qagdaaraai tfsffsilsw vknlthassg aphrspefpr
      181 htphfrrar
//
LOCUS       XP_061008537             337 aa            linear   MAM 02-DEC-2023
DEFINITION  Na(+)/H(+) exchange regulatory cofactor NHE-RF2 isoform X1 [Dama
            dama].
ACCESSION   XP_061008537
VERSION     XP_061008537.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152554.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..337
                     /product="Na(+)/H(+) exchange regulatory cofactor NHE-RF2
                     isoform X1"
                     /calculated_mol_wt=37335
     Region          10..89
                     /region_name="PDZ_NHERF-like"
                     /note="PDZ domains of the Na+/H+ exchange regulatory
                     cofactor (NHERF) family (NHERF1-4), and related domains;
                     cd06768"
                     /db_xref="CDD:467249"
     Site            order(20..26,37,40,69,73,76..77)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467249"
     Region          150..229
                     /region_name="PDZ_NHERF-like"
                     /note="PDZ domains of the Na+/H+ exchange regulatory
                     cofactor (NHERF) family (NHERF1-4), and related domains;
                     cd06768"
                     /db_xref="CDD:467249"
     Site            order(160..166,177,180,209,213,216..217)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467249"
     Region          232..337
                     /region_name="EBP50_C"
                     /note="EBP50, C-terminal; pfam09007"
                     /db_xref="CDD:462654"
     CDS             1..337
                     /gene="NHERF2"
                     /coded_by="XM_061152554.1:121..1134"
                     /db_xref="GeneID:133063334"
ORIGIN      
        1 maspeplrpr lcrlvrgehg ygfhlhgekg rrgqfirrve pgspaeaagl ragdrlvevn
       61 gvnvegethh qvvqrikame gqtcllvvdk etdeelrrrq ltcteemarr glppahdpwe
      121 pkpdwaqags lsseatqeda ngplrelrpr lchlrkgpqg ygfnlhsdks rpgqyirsvd
      181 pgspaahsgl raqdrlievn gqnveglrha evvasikare deaqllvvdp etdehfkrlr
      241 vtpteehveg plpspvtngt ssvqlnggsv cssrsdlpgl dkdtedgstw krdpfqesgl
      301 hlsptaaeak ekaratrvnk rapqmdwnrk reifsnf
//
LOCUS       XP_061008538             316 aa            linear   MAM 02-DEC-2023
DEFINITION  Na(+)/H(+) exchange regulatory cofactor NHE-RF2 isoform X2 [Dama
            dama].
ACCESSION   XP_061008538
VERSION     XP_061008538.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152555.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..316
                     /product="Na(+)/H(+) exchange regulatory cofactor NHE-RF2
                     isoform X2"
                     /calculated_mol_wt=35202
     Region          10..89
                     /region_name="PDZ_NHERF-like"
                     /note="PDZ domains of the Na+/H+ exchange regulatory
                     cofactor (NHERF) family (NHERF1-4), and related domains;
                     cd06768"
                     /db_xref="CDD:467249"
     Site            order(20..26,37,40,69,73,76..77)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467249"
     Region          150..229
                     /region_name="PDZ_NHERF-like"
                     /note="PDZ domains of the Na+/H+ exchange regulatory
                     cofactor (NHERF) family (NHERF1-4), and related domains;
                     cd06768"
                     /db_xref="CDD:467249"
     Site            order(160..166,177,180,209,213,216..217)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467249"
     Region          232..316
                     /region_name="EBP50_C"
                     /note="EBP50, C-terminal; pfam09007"
                     /db_xref="CDD:462654"
     CDS             1..316
                     /gene="NHERF2"
                     /coded_by="XM_061152555.1:128..1078"
                     /db_xref="GeneID:133063334"
ORIGIN      
        1 maspeplrpr lcrlvrgehg ygfhlhgekg rrgqfirrve pgspaeaagl ragdrlvevn
       61 gvnvegethh qvvqrikame gqtcllvvdk etdeelrrrq ltcteemarr glppahdpwe
      121 pkpdwaqags lsseatqeda ngplrelrpr lchlrkgpqg ygfnlhsdks rpgqyirsvd
      181 pgspaahsgl raqdrlievn gqnveglrha evvasikare deaqllvvdp etdehfkrlr
      241 vtpteehveg plpspvtngt ssvqdgstwk rdpfqesglh lsptaaeake karatrvnkr
      301 apqmdwnrkr eifsnf
//
LOCUS       XP_061008539             276 aa            linear   MAM 02-DEC-2023
DEFINITION  Na(+)/H(+) exchange regulatory cofactor NHE-RF2 isoform X3 [Dama
            dama].
ACCESSION   XP_061008539
VERSION     XP_061008539.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152556.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..276
                     /product="Na(+)/H(+) exchange regulatory cofactor NHE-RF2
                     isoform X3"
                     /calculated_mol_wt=30726
     Region          89..168
                     /region_name="PDZ_NHERF-like"
                     /note="PDZ domains of the Na+/H+ exchange regulatory
                     cofactor (NHERF) family (NHERF1-4), and related domains;
                     cd06768"
                     /db_xref="CDD:467249"
     Site            order(99..105,116,119,148,152,155..156)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467249"
     Region          171..276
                     /region_name="EBP50_C"
                     /note="EBP50, C-terminal; pfam09007"
                     /db_xref="CDD:462654"
     CDS             1..276
                     /gene="NHERF2"
                     /coded_by="XM_061152556.1:16..846"
                     /db_xref="GeneID:133063334"
ORIGIN      
        1 myicacvhdw vvqrikameg qtcllvvdke tdeelrrrql tcteemarrg lppahdpwep
       61 kpdwaqagsl sseatqedan gplrelrprl chlrkgpqgy gfnlhsdksr pgqyirsvdp
      121 gspaahsglr aqdrlievng qnveglrhae vvasikared eaqllvvdpe tdehfkrlrv
      181 tpteehvegp lpspvtngts svqlnggsvc ssrsdlpgld kdtedgstwk rdpfqesglh
      241 lsptaaeake karatrvnkr apqmdwnrkr eifsnf
//
LOCUS       XP_061008540             226 aa            linear   MAM 02-DEC-2023
DEFINITION  Na(+)/H(+) exchange regulatory cofactor NHE-RF2 isoform X4 [Dama
            dama].
ACCESSION   XP_061008540
VERSION     XP_061008540.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152557.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..226
                     /product="Na(+)/H(+) exchange regulatory cofactor NHE-RF2
                     isoform X4"
                     /calculated_mol_wt=24459
     Region          39..118
                     /region_name="PDZ_NHERF-like"
                     /note="PDZ domains of the Na+/H+ exchange regulatory
                     cofactor (NHERF) family (NHERF1-4), and related domains;
                     cd06768"
                     /db_xref="CDD:467249"
     Site            order(49..55,66,69,98,102,105..106)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467249"
     Region          121..226
                     /region_name="EBP50_C"
                     /note="EBP50, C-terminal; pfam09007"
                     /db_xref="CDD:462654"
     CDS             1..226
                     /gene="NHERF2"
                     /coded_by="XM_061152557.1:133..813"
                     /db_xref="GeneID:133063334"
ORIGIN      
        1 marsgnaaps apapgtppqs psqglvqdan gplrelrprl chlrkgpqgy gfnlhsdksr
       61 pgqyirsvdp gspaahsglr aqdrlievng qnveglrhae vvasikared eaqllvvdpe
      121 tdehfkrlrv tpteehvegp lpspvtngts svqlnggsvc ssrsdlpgld kdtedgstwk
      181 rdpfqesglh lsptaaeake karatrvnkr apqmdwnrkr eifsnf
//
LOCUS       XP_061008541            4305 aa            linear   MAM 02-DEC-2023
DEFINITION  polycystin-1 [Dama dama].
ACCESSION   XP_061008541
VERSION     XP_061008541.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152558.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4305
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..4305
                     /product="polycystin-1"
                     /calculated_mol_wt=459702
     Region          <49..>128
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          70..92
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          93..116
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          97..2732
                     /region_name="PCC"
                     /note="polycystin cation channel protein; TIGR00864"
                     /db_xref="CDD:188093"
     Region          117..129
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          3012..3061
                     /region_name="GPS"
                     /note="GPCR proteolysis site, GPS, motif; cl02559"
                     /db_xref="CDD:470616"
     Region          3119..3238
                     /region_name="PLAT_polycystin"
                     /note="PLAT/LH2 domain of polycystin-1 like proteins.
                     Polycystins are a large family of membrane proteins
                     composed of multiple domains, present in fish,
                     invertebrates, mammals, and humans that are widely
                     expressed in various cell types and whose biological...;
                     cd01752"
                     /db_xref="CDD:238850"
     Region          3712..3892
                     /region_name="Polycystin_dom"
                     /note="Polycystin domain; pfam20519"
                     /db_xref="CDD:466668"
     Region          3894..4114
                     /region_name="PKD_channel"
                     /note="Polycystin cation channel; pfam08016"
                     /db_xref="CDD:462341"
     CDS             1..4305
                     /gene="PKD1"
                     /coded_by="XM_061152558.1:1..12918"
                     /db_xref="GeneID:133063335"
ORIGIN      
        1 mppaaparla lalglglwlg alagvpgrgc gpcappclcg papgaaclvn csghglrtlg
       61 palripadat aldvshnllr aldfgllanl salteldisn nkistleegi fanlfnlsei
      121 nlggnplecd cglawlprwv egqrvrvvqp eaatcagpgp lagqpllsga lldgacgeey
      181 vacvpddssg avalvafsaa pegplapeac galcfaagqt laalseqgqc lcgaarppnt
      241 ssaclpscsg pslppapacr gpsllqhifp aspgaallgp rgplasgqpa afhvtaslpv
      301 sstrwdfgdg spevdvagpd athryvlpgr ypvtavlalg agsarlgaev qveaapaale
      361 lvcvasvhsn etlqlgvrnr ggsgleatys imalgeepvq vvhplcpldt eifpgnghcy
      421 rlqaekaswa qaqeqcrawa gaalamvdsp avqrflvsrv trsldvwigf savegaaagp
      481 apqggafsle scqnwlpgep hpataercvr lgpagqcntd lcsaphsyvc elrpggpvwd
      541 aenflvgaps gdlqgplspl eqqeallapq epvevmvfpg lspsrevflt taefatqelg
      601 rpaqlrlqvf ragcgagale nssepqgrsl enrtelapac tpegplcpqv nvclpldnpc
      661 hpgacangst pgpglpgvsy alwkeflfsv psgppaqysv pfhgqdvtll pgdlvslqhd
      721 agpgallhcp ptlgfpgset pyfsanasaw larlpaqlea apagpacalr llaaterltp
      781 llglglgpnp glrrpgryev ratvgngvsr hnltcsfdvl spvaglqaiy papqdgrlyv
      841 ptsgsalvlq vdsganatam ahwpggnasa pfeaacpaav aalapgcaea angslfsvlt
      901 lpglregehe vevvvengag ranlsllvta eepirglram pspearvlqg vlvryspvve
      961 agsdvvfrwt iddkqsltfh nvvfnviyqs aavfklslta snhvssvsah fnvtvepmhr
     1021 mrglqvsavp svlapnatla laahvlvdsa vevaflwtfg dgeqavgqfk ppydesfevp
     1081 dptvaqvlve hntshtypvp geynltllvs tafenltqqv pvsvraalpa vavavgsqvl
     1141 vagwpvtffp hplpspggvl ytwdfgdgsp avsqpqpevn htfasrgtyh vrlevnntvs
     1201 hvvaavsvrv feelrgltvs lsptveqgap vvvsaaldsg dnvtwtfdmg dgtvltgpes
     1261 tvehvyrraq nctvtvgass pagrlahslp vhvfvlevlw iepvaciasq pharltahvt
     1321 gdpahyvfdw tfgdgssnis irgdptvthn ftrsgtfpla lvlasrvnra hyfssvcvep
     1381 elgnvtlrpe rqfvrlgdea rlaahawppf pyrytwdfga edaaariggp eatftyrlvg
     1441 sylvtvtaan nisaandsal vevqepvevt girvnsshal elqqpylfsa vghgrpasyl
     1501 welgdggrlq gpavthaygs tgcfqvqvas wnevsrgear lnvtvqrrvr glsvnasrtv
     1561 lplngsvsfs taleagsdvr yswvlcdrct pipggptisy tfrsvgtfni ivtaenevga
     1621 aqdsifvyvl qhieglqvvg cgccfptnrt lqlqatvrdg tnisyswaaq rdsgpalags
     1681 gkafsltvle agtyhvqlra tnmlgsasan ctvdfvepvg wlavtaspnp aavnasitlr
     1741 aelaggsgvt yswsleegpr wetpepsttl sfpspglrpv tvtaknqlgs anasvevvvq
     1801 vpvsglsiqa reldggfvva gstvpfwgql aagtdvswhw avpggsrqgq hvtvvlsdag
     1861 lvsvqlnasn avswvvathn ltvqepivgl vlwasrkvve pgqpvhfqil laagsavrfl
     1921 lqvgggglev lpaphfsrsf prvgdytvsv haenrvsraq aqvrisvlea vgglqvpdcc
     1981 glaiatgaer nfsarvqrgs rvayawyfsl qkvqgdslvi lsgrdvtytp vaaglleihv
     2041 rafnelggvn ctlrvevqda iqhvalrgpr cfanrsahfe aatspsarrv tyrwdfgdga
     2101 pvedtevpwa ahsylqpgdy rvqvnasnlv sflvaqatvt vhvlacrepa vdvalppqvl
     2161 mrrsqrnyle ahvdlrdcvs yqteyrwevy raascqrpgr aarvalpgvd vsrpqlvlpr
     2221 lalpvghycf vflvsfgdtp larsiqanvt vaaerlvpiv eggssrvwsd sqdlvldgsk
     2281 sydpnledgd qtplsfhwac vsatqsetgg calnfgprgs svvtiprerl ragveytfnl
     2341 tvwkagrkee vtsqtvlvrs grlpivslec vsckaqavya vsrssyvyle grcdncdggs
     2401 erglwaarsf snetlvldat ttstgsagmr lvvrqgvlrd gegytftltv lgrlgqeqgc
     2461 asirlapnrp prggscrlfp ledvralttk lhfecagwqd aedagaplvy vlqlrrcrqg
     2521 hceefcvykg slasygavlp pgfaphfvvg lavlvqdqlg aavvalnrsl titlpdpped
     2581 padgppdltg wlhslagstl pgllrqadpq hvmeyslali avlneyeqtl pmlvepdprq
     2641 elraqirkni tetlvslrvn tvddiqqvaa alaqctvssr elvcrsclkk tlhrledmmr
     2701 ilqaetatga gtptaiadsi lnitgdlihv assdvqgpqp selgaeppsl lvasrayqls
     2761 salvgiltrs rvlneepltl ageeilaqgk rsdprsllcq gdapgpgchf sipeafsaal
     2821 pnlsdvvqli llvdsnpfpf gyisnytvst kvasmafqtq agaqipirql aseraitvkv
     2881 pnnsdqaaqg qrvpagsavi qprasvsvvv tpensnpeag lhlqltftvl deqylpeepe
     2941 pflaaylhse prpnehncsa skrisleala grdhrpytff iapgsrdlgt syylnlsshf
     3001 rwsalavsvg lytslcqyfs eedmawrteg lvpleetspr eavcltrhlt afgaslfvpa
     3061 srvefsfpep asgvnhvvll tcavclltym vmavilrkld qldvrrvrai pfcgkggrfk
     3121 yeilvktgwg rgsgttahvg imlygadgrs ghrhldgdga fqrnsldvfq iatphslgrl
     3181 wkirvwhdnk glspawflqh vivrdlqsar stfflvndwl sveteanggl vekevlaasd
     3241 aalrrfkrll vaelqrgffd khvwlsiwdr lprsrftrvq ratccvllig lflganavwy
     3301 gavgdsthsq gpvsslapls ldtvavglvs slvvypvyla ilflfrmsrs kvaggpsptp
     3361 agpqaldvds cldssvldss mlafpglgae afagqvrqds fledskslvc wpssegtlsw
     3421 pdllsdpsvm gsalqrlarg rmgltpgped slslvspssp akyfsasded lirqilaega
     3481 gslaptqhtq getdllaglc sapgektqpv mlrspgdtgl pspgltweqp pparlpktgl
     3541 veglrkrllp awcaplahgl slllvavavg vsgwvgasfp psvsvmwlls sgssflasfl
     3601 cwepfkvlle alyfslvakr lhpdeddtlv espavtpvse rvprvrpphg falflakeea
     3661 rkvkrlhgml rgllvymffl lvtllanygd tschnhayrl qsaikqelds qaflaitrsd
     3721 efwpwmshvl lpyihgnqsr pelgpprlrq vrlqealcph ppgsrdpacs aasgsfstsn
     3781 ysvgwgsaal nsseiwaysa pdllgvwswg scavydsggy vqelgpslee sraqlgflql
     3841 hnwidnrsra vfveltrysp avglhaavtl rlefpaagha vaalsvrpfv lrqlsaglsl
     3901 plltsvslll falyfsaaev rawrregrtr atrsgtwarw llvaltaaaa lvrlaqlgaa
     3961 drqwtrflrr rprrftsfeq vaqlsavarg ltasllflll vkaaqqlrfv rqwsvfgktl
     4021 cralpelaga alglvvlaaa yaqlavllvs scvdslrsaa qaflvlcpgt ggpalcpaes
     4081 wrlspmlctg lwalrlwgvl rlgsvllrwr yhtlhgelyr pawepqdyem velflrrlrl
     4141 wmgfskvkef rhkvrfegme plpsrssrgs kasaevppps ggsdtsrpst sssqleglsv
     4201 vlgrpgprel epepsrlhav feallaqfdr lnqatedvyq lerrlqrlqg hrsnvppasp
     4261 spgpspglrp vlpsrlaras rgiglaagps raslrarnki hpsss
//
LOCUS       XP_061008542            1812 aa            linear   MAM 02-DEC-2023
DEFINITION  tuberin isoform X1 [Dama dama].
ACCESSION   XP_061008542
VERSION     XP_061008542.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152559.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1812
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1812
                     /product="tuberin isoform X1"
                     /calculated_mol_wt=200969
     Region          54..419
                     /region_name="DUF3384"
                     /note="Domain of unknown function (DUF3384); pfam11864"
                     /db_xref="CDD:463376"
     Region          555..903
                     /region_name="Tuberin"
                     /note="pfam03542"
                     /db_xref="CDD:460965"
     Region          1142..>1507
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          1565..1751
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     CDS             1..1812
                     /gene="TSC2"
                     /coded_by="XM_061152559.1:150..5588"
                     /db_xref="GeneID:133063336"
ORIGIN      
        1 makpaskdsg lkekfkillg lgtprpnprs aegkqtefii taeilrelsv ecglnnrirv
       61 igqicevart kkfeehavea lwkavsdllq perppearha vlallkaivq gqgdrlgvlr
      121 alffkvikdy psnedlherl evfkaltdng rhityleeel adfvlqwmdv glssefllvl
      181 vnlvkfnscy ldeyiasmvh mvcllcvqtv ssvdievslq vldavvcync lpaeslplfi
      241 vtlcrtinvk elcepcwklm rnllgthlgh saiyhmcrim edraymedap llrgavffvg
      301 malwgahrly slknsptsvl psfyeamtcp nevvsyeivl sitrlikkyr rdlqavtwdi
      361 llniierllq qlqsldspel saivhdllst veelcdqnef hgsqeryfel vercadqrpe
      421 ssllnlityr aqsihpakdg wihnlqllme rffrsesrsa vrikvldvls fvllinrqfy
      481 eeelinsvvi sqlshipedr dhqvrklatq llvdlaegch thhfnslldi iekviarsls
      541 pppeleerdv aaysasledv ktavlgllvi lqtklyalpa shatrvyetl vghiqlhykh
      601 sytlpiassi rlqafdfllq lradslhrlg lpskdglvrf spycvcdyle terssekkag
      661 gplspptgpp gpapagpavr lgslpysllf rvllqclkqe sdwkvlklvl sklpeslryk
      721 vliftspcsv dqlsaalcsm lsgpktlerl rgtpegfsrt dlhlavvpvl talisyhnyl
      781 dktrqremvy cleqgliyrc asqcvvalav csvempdvil kalpvlvvkl thisatasma
      841 iplleflstl arlphlyrnf aaeqyasvfa islpytnpsk fnqyivclah hviamwfirc
      901 rlpfrkdfvp yitkglrsnv llsfddtpek dsfrarstsl nerpkslria rppkqglnns
      961 ppmkelkess aadafrcrsi svsehvvrri qtsltsaslg sadessmaqa ddnlknlhle
     1021 ltetcldmma ryvfsnftav pkrspvgefl laggrtktwl vgnklvtvtt svgtgtrsll
     1081 gldsgelqgg pelssdpgvh vrqtkeapak lesqagqqvy hgardrvrsm sgghglrvga
     1141 ldtaashfps sptspgsqta pagqpekasa gsplpaqkek tnlaayvpll tqgwaeilvr
     1201 rptgntswlm slenplspfs sdinsmplqe lsnalmaaer fkerrdtaly kslsvpaags
     1261 akppppprsn tvasfsslcq srcqgrlhrs iswadsavvl eeggpgeavl saeppeledf
     1321 eatlgsderc rrsdafsrss stssqeeksf haeelppggi pieravsseg srasvdlafq
     1381 psqplsksss spelqtlqdi lgdpgdkaev grlspeakar sqsgildgeg vawsapgeer
     1441 rgpaqpegpl psscprspsg lrprgytisd sapsrrgkrv erdafksrag tsntekvpgi
     1501 npsfvflqly hspffgdesn kpillpnesf ersvqlldqi psydthkiav lyvgegqsns
     1561 elailsnehg syrytefltg lgklielkdc qpdkvylggl dvcgedgqft ycwhddimqa
     1621 vfhiatlmpt kdvdkhrcdk krhlgndfvs ivyndsgedf klgtikgqfn fvhviitpld
     1681 yecnlvslqc rkdmeglvdt smakivsdrn lpfvarqmal hanmasqvhh srsnptdiyp
     1741 skwiarlrhi krlrqriree ahyssanlpl mqthppghak apaqapaept payetgqrkr
     1801 lvssvddfte fv
//
LOCUS       XP_061008543            1790 aa            linear   MAM 02-DEC-2023
DEFINITION  tuberin isoform X2 [Dama dama].
ACCESSION   XP_061008543
VERSION     XP_061008543.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152560.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1790
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1790
                     /product="tuberin isoform X2"
                     /calculated_mol_wt=198494
     Region          54..419
                     /region_name="DUF3384"
                     /note="Domain of unknown function (DUF3384); pfam11864"
                     /db_xref="CDD:463376"
     Region          555..903
                     /region_name="Tuberin"
                     /note="pfam03542"
                     /db_xref="CDD:460965"
     Region          1543..1729
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     CDS             1..1790
                     /gene="TSC2"
                     /coded_by="XM_061152560.1:150..5522"
                     /db_xref="GeneID:133063336"
ORIGIN      
        1 makpaskdsg lkekfkillg lgtprpnprs aegkqtefii taeilrelsv ecglnnrirv
       61 igqicevart kkfeehavea lwkavsdllq perppearha vlallkaivq gqgdrlgvlr
      121 alffkvikdy psnedlherl evfkaltdng rhityleeel adfvlqwmdv glssefllvl
      181 vnlvkfnscy ldeyiasmvh mvcllcvqtv ssvdievslq vldavvcync lpaeslplfi
      241 vtlcrtinvk elcepcwklm rnllgthlgh saiyhmcrim edraymedap llrgavffvg
      301 malwgahrly slknsptsvl psfyeamtcp nevvsyeivl sitrlikkyr rdlqavtwdi
      361 llniierllq qlqsldspel saivhdllst veelcdqnef hgsqeryfel vercadqrpe
      421 ssllnlityr aqsihpakdg wihnlqllme rffrsesrsa vrikvldvls fvllinrqfy
      481 eeelinsvvi sqlshipedr dhqvrklatq llvdlaegch thhfnslldi iekviarsls
      541 pppeleerdv aaysasledv ktavlgllvi lqtklyalpa shatrvyetl vghiqlhykh
      601 sytlpiassi rlqafdfllq lradslhrlg lpskdglvrf spycvcdyle terssekkag
      661 gplspptgpp gpapagpavr lgslpysllf rvllqclkqe sdwkvlklvl sklpeslryk
      721 vliftspcsv dqlsaalcsm lsgpktlerl rgtpegfsrt dlhlavvpvl talisyhnyl
      781 dktrqremvy cleqgliyrc asqcvvalav csvempdvil kalpvlvvkl thisatasma
      841 iplleflstl arlphlyrnf aaeqyasvfa islpytnpsk fnqyivclah hviamwfirc
      901 rlpfrkdfvp yitkglrsnv llsfddtpek dsfrarstsl nerpkslria rppkqglnns
      961 ppmkelkess aadafrcrsi svsehvvrsr iqtsltsasl gsadessmaq addnlknlhl
     1021 eltetcldmm aryvfsnfta vpkrspvgef llaggrtktw lvgnklvtvt tsvgtgtrsl
     1081 lgldsgelqg gpelssdpgv hvrqtkeapa klesqagqqv yhgardrvrs msgghglrvg
     1141 aldtaashfp ssptspgsqt apagqpekas agsplpaqke ktnlaayvpl ltqgwaeilv
     1201 rrptgntswl mslenplspf ssdinsmplq elsnalmaae rfkerrdtal ykslsvpaag
     1261 sakppppprs ntdsavvlee ggpgeavlsa eppeledfea tlgsdercrr sdafsrssst
     1321 ssqeeksfha eelppggipi eravssegsr asvdlafqps qplskssssp elqtlqdilg
     1381 dpgdkaevgr lspeakarsq sgildgegva wsapgeerrg paqpegplps scprspsglr
     1441 prgytisdsa psrrgkrver dafksragts ntekvpginp sfvflqlyhs pffgdesnkp
     1501 illpnesfer svqlldqips ydthkiavly vgegqsnsel ailsnehgsy rytefltglg
     1561 klielkdcqp dkvylggldv cgedgqftyc whddimqavf hiatlmptkd vdkhrcdkkr
     1621 hlgndfvsiv yndsgedfkl gtikgqfnfv hviitpldye cnlvslqcrk dmeglvdtsm
     1681 akivsdrnlp fvarqmalha nmasqvhhsr snptdiypsk wiarlrhikr lrqrireeah
     1741 yssanlplmq thppghakap aqapaeptpa yetgqrkrlv ssvddftefv
//
LOCUS       XP_061008544            1789 aa            linear   MAM 02-DEC-2023
DEFINITION  tuberin isoform X3 [Dama dama].
ACCESSION   XP_061008544
VERSION     XP_061008544.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152561.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1789
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1789
                     /product="tuberin isoform X3"
                     /calculated_mol_wt=198407
     Region          54..419
                     /region_name="DUF3384"
                     /note="Domain of unknown function (DUF3384); pfam11864"
                     /db_xref="CDD:463376"
     Region          555..903
                     /region_name="Tuberin"
                     /note="pfam03542"
                     /db_xref="CDD:460965"
     Region          1542..1728
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     CDS             1..1789
                     /gene="TSC2"
                     /coded_by="XM_061152561.1:150..5519"
                     /db_xref="GeneID:133063336"
ORIGIN      
        1 makpaskdsg lkekfkillg lgtprpnprs aegkqtefii taeilrelsv ecglnnrirv
       61 igqicevart kkfeehavea lwkavsdllq perppearha vlallkaivq gqgdrlgvlr
      121 alffkvikdy psnedlherl evfkaltdng rhityleeel adfvlqwmdv glssefllvl
      181 vnlvkfnscy ldeyiasmvh mvcllcvqtv ssvdievslq vldavvcync lpaeslplfi
      241 vtlcrtinvk elcepcwklm rnllgthlgh saiyhmcrim edraymedap llrgavffvg
      301 malwgahrly slknsptsvl psfyeamtcp nevvsyeivl sitrlikkyr rdlqavtwdi
      361 llniierllq qlqsldspel saivhdllst veelcdqnef hgsqeryfel vercadqrpe
      421 ssllnlityr aqsihpakdg wihnlqllme rffrsesrsa vrikvldvls fvllinrqfy
      481 eeelinsvvi sqlshipedr dhqvrklatq llvdlaegch thhfnslldi iekviarsls
      541 pppeleerdv aaysasledv ktavlgllvi lqtklyalpa shatrvyetl vghiqlhykh
      601 sytlpiassi rlqafdfllq lradslhrlg lpskdglvrf spycvcdyle terssekkag
      661 gplspptgpp gpapagpavr lgslpysllf rvllqclkqe sdwkvlklvl sklpeslryk
      721 vliftspcsv dqlsaalcsm lsgpktlerl rgtpegfsrt dlhlavvpvl talisyhnyl
      781 dktrqremvy cleqgliyrc asqcvvalav csvempdvil kalpvlvvkl thisatasma
      841 iplleflstl arlphlyrnf aaeqyasvfa islpytnpsk fnqyivclah hviamwfirc
      901 rlpfrkdfvp yitkglrsnv llsfddtpek dsfrarstsl nerpkslria rppkqglnns
      961 ppmkelkess aadafrcrsi svsehvvrri qtsltsaslg sadessmaqa ddnlknlhle
     1021 ltetcldmma ryvfsnftav pkrspvgefl laggrtktwl vgnklvtvtt svgtgtrsll
     1081 gldsgelqgg pelssdpgvh vrqtkeapak lesqagqqvy hgardrvrsm sgghglrvga
     1141 ldtaashfps sptspgsqta pagqpekasa gsplpaqkek tnlaayvpll tqgwaeilvr
     1201 rptgntswlm slenplspfs sdinsmplqe lsnalmaaer fkerrdtaly kslsvpaags
     1261 akppppprsn tdsavvleeg gpgeavlsae ppeledfeat lgsdercrrs dafsrsssts
     1321 sqeeksfhae elppggipie ravssegsra svdlafqpsq plsksssspe lqtlqdilgd
     1381 pgdkaevgrl speakarsqs gildgegvaw sapgeerrgp aqpegplpss cprspsglrp
     1441 rgytisdsap srrgkrverd afksragtsn tekvpginps fvflqlyhsp ffgdesnkpi
     1501 llpnesfers vqlldqipsy dthkiavlyv gegqsnsela ilsnehgsyr ytefltglgk
     1561 lielkdcqpd kvylggldvc gedgqftycw hddimqavfh iatlmptkdv dkhrcdkkrh
     1621 lgndfvsivy ndsgedfklg tikgqfnfvh viitpldyec nlvslqcrkd meglvdtsma
     1681 kivsdrnlpf varqmalhan masqvhhsrs nptdiypskw iarlrhikrl rqrireeahy
     1741 ssanlplmqt hppghakapa qapaeptpay etgqrkrlvs svddftefv
//
LOCUS       XP_061008546            1770 aa            linear   MAM 02-DEC-2023
DEFINITION  tuberin isoform X4 [Dama dama].
ACCESSION   XP_061008546
VERSION     XP_061008546.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152563.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1770
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1770
                     /product="tuberin isoform X4"
                     /calculated_mol_wt=196311
     Region          54..419
                     /region_name="DUF3384"
                     /note="Domain of unknown function (DUF3384); pfam11864"
                     /db_xref="CDD:463376"
     Region          555..903
                     /region_name="Tuberin"
                     /note="pfam03542"
                     /db_xref="CDD:460965"
     Region          1100..>1465
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          1523..1709
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     CDS             1..1770
                     /gene="TSC2"
                     /coded_by="XM_061152563.1:150..5462"
                     /db_xref="GeneID:133063336"
ORIGIN      
        1 makpaskdsg lkekfkillg lgtprpnprs aegkqtefii taeilrelsv ecglnnrirv
       61 igqicevart kkfeehavea lwkavsdllq perppearha vlallkaivq gqgdrlgvlr
      121 alffkvikdy psnedlherl evfkaltdng rhityleeel adfvlqwmdv glssefllvl
      181 vnlvkfnscy ldeyiasmvh mvcllcvqtv ssvdievslq vldavvcync lpaeslplfi
      241 vtlcrtinvk elcepcwklm rnllgthlgh saiyhmcrim edraymedap llrgavffvg
      301 malwgahrly slknsptsvl psfyeamtcp nevvsyeivl sitrlikkyr rdlqavtwdi
      361 llniierllq qlqsldspel saivhdllst veelcdqnef hgsqeryfel vercadqrpe
      421 ssllnlityr aqsihpakdg wihnlqllme rffrsesrsa vrikvldvls fvllinrqfy
      481 eeelinsvvi sqlshipedr dhqvrklatq llvdlaegch thhfnslldi iekviarsls
      541 pppeleerdv aaysasledv ktavlgllvi lqtklyalpa shatrvyetl vghiqlhykh
      601 sytlpiassi rlqafdfllq lradslhrlg lpskdglvrf spycvcdyle terssekkag
      661 gplspptgpp gpapagpavr lgslpysllf rvllqclkqe sdwkvlklvl sklpeslryk
      721 vliftspcsv dqlsaalcsm lsgpktlerl rgtpegfsrt dlhlavvpvl talisyhnyl
      781 dktrqremvy cleqgliyrc asqcvvalav csvempdvil kalpvlvvkl thisatasma
      841 iplleflstl arlphlyrnf aaeqyasvfa islpytnpsk fnqyivclah hviamwfirc
      901 rlpfrkdfvp yitkglrsnv llsfddtpek dsfrarstsl nerpksriqt sltsaslgsa
      961 dessmaqadd nlknlhlelt etcldmmary vfsnftavpk rspvgeflla ggrtktwlvg
     1021 nklvtvttsv gtgtrsllgl dsgelqggpe lssdpgvhvr qtkeapakle sqagqqvyhg
     1081 ardrvrsmsg ghglrvgald taashfpssp tspgsqtapa gqpekasags plpaqkektn
     1141 laayvplltq gwaeilvrrp tgntswlmsl enplspfssd insmplqels nalmaaerfk
     1201 errdtalyks lsvpaagsak ppppprsntv asfsslcqsr cqgrlhrsis wadsavvlee
     1261 ggpgeavlsa eppeledfea tlgsdercrr sdafsrssst ssqeeksfha eelppggipi
     1321 eravssegsr asvdlafqps qplskssssp elqtlqdilg dpgdkaevgr lspeakarsq
     1381 sgildgegva wsapgeerrg paqpegplps scprspsglr prgytisdsa psrrgkrver
     1441 dafksragts ntekvpginp sfvflqlyhs pffgdesnkp illpnesfer svqlldqips
     1501 ydthkiavly vgegqsnsel ailsnehgsy rytefltglg klielkdcqp dkvylggldv
     1561 cgedgqftyc whddimqavf hiatlmptkd vdkhrcdkkr hlgndfvsiv yndsgedfkl
     1621 gtikgqfnfv hviitpldye cnlvslqcrk dmeglvdtsm akivsdrnlp fvarqmalha
     1681 nmasqvhhsr snptdiypsk wiarlrhikr lrqrireeah yssanlplmq thppghakap
     1741 aqapaeptpa yetgqrkrlv ssvddftefv
//
LOCUS       XP_061008547            1769 aa            linear   MAM 02-DEC-2023
DEFINITION  tuberin isoform X5 [Dama dama].
ACCESSION   XP_061008547
VERSION     XP_061008547.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152564.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1769
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1769
                     /product="tuberin isoform X5"
                     /calculated_mol_wt=196224
     Region          54..419
                     /region_name="DUF3384"
                     /note="Domain of unknown function (DUF3384); pfam11864"
                     /db_xref="CDD:463376"
     Region          555..903
                     /region_name="Tuberin"
                     /note="pfam03542"
                     /db_xref="CDD:460965"
     Region          1099..>1464
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          1522..1708
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     CDS             1..1769
                     /gene="TSC2"
                     /coded_by="XM_061152564.1:150..5459"
                     /db_xref="GeneID:133063336"
ORIGIN      
        1 makpaskdsg lkekfkillg lgtprpnprs aegkqtefii taeilrelsv ecglnnrirv
       61 igqicevart kkfeehavea lwkavsdllq perppearha vlallkaivq gqgdrlgvlr
      121 alffkvikdy psnedlherl evfkaltdng rhityleeel adfvlqwmdv glssefllvl
      181 vnlvkfnscy ldeyiasmvh mvcllcvqtv ssvdievslq vldavvcync lpaeslplfi
      241 vtlcrtinvk elcepcwklm rnllgthlgh saiyhmcrim edraymedap llrgavffvg
      301 malwgahrly slknsptsvl psfyeamtcp nevvsyeivl sitrlikkyr rdlqavtwdi
      361 llniierllq qlqsldspel saivhdllst veelcdqnef hgsqeryfel vercadqrpe
      421 ssllnlityr aqsihpakdg wihnlqllme rffrsesrsa vrikvldvls fvllinrqfy
      481 eeelinsvvi sqlshipedr dhqvrklatq llvdlaegch thhfnslldi iekviarsls
      541 pppeleerdv aaysasledv ktavlgllvi lqtklyalpa shatrvyetl vghiqlhykh
      601 sytlpiassi rlqafdfllq lradslhrlg lpskdglvrf spycvcdyle terssekkag
      661 gplspptgpp gpapagpavr lgslpysllf rvllqclkqe sdwkvlklvl sklpeslryk
      721 vliftspcsv dqlsaalcsm lsgpktlerl rgtpegfsrt dlhlavvpvl talisyhnyl
      781 dktrqremvy cleqgliyrc asqcvvalav csvempdvil kalpvlvvkl thisatasma
      841 iplleflstl arlphlyrnf aaeqyasvfa islpytnpsk fnqyivclah hviamwfirc
      901 rlpfrkdfvp yitkglrsnv llsfddtpek dsfrarstsl nerpkriqts ltsaslgsad
      961 essmaqaddn lknlhlelte tcldmmaryv fsnftavpkr spvgefllag grtktwlvgn
     1021 klvtvttsvg tgtrsllgld sgelqggpel ssdpgvhvrq tkeapakles qagqqvyhga
     1081 rdrvrsmsgg hglrvgaldt aashfpsspt spgsqtapag qpekasagsp lpaqkektnl
     1141 aayvplltqg waeilvrrpt gntswlmsle nplspfssdi nsmplqelsn almaaerfke
     1201 rrdtalyksl svpaagsakp pppprsntva sfsslcqsrc qgrlhrsisw adsavvleeg
     1261 gpgeavlsae ppeledfeat lgsdercrrs dafsrsssts sqeeksfhae elppggipie
     1321 ravssegsra svdlafqpsq plsksssspe lqtlqdilgd pgdkaevgrl speakarsqs
     1381 gildgegvaw sapgeerrgp aqpegplpss cprspsglrp rgytisdsap srrgkrverd
     1441 afksragtsn tekvpginps fvflqlyhsp ffgdesnkpi llpnesfers vqlldqipsy
     1501 dthkiavlyv gegqsnsela ilsnehgsyr ytefltglgk lielkdcqpd kvylggldvc
     1561 gedgqftycw hddimqavfh iatlmptkdv dkhrcdkkrh lgndfvsivy ndsgedfklg
     1621 tikgqfnfvh viitpldyec nlvslqcrkd meglvdtsma kivsdrnlpf varqmalhan
     1681 masqvhhsrs nptdiypskw iarlrhikrl rqrireeahy ssanlplmqt hppghakapa
     1741 qapaeptpay etgqrkrlvs svddftefv
//
LOCUS       XP_061008548            1748 aa            linear   MAM 02-DEC-2023
DEFINITION  tuberin isoform X6 [Dama dama].
ACCESSION   XP_061008548
VERSION     XP_061008548.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152565.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1748
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1748
                     /product="tuberin isoform X6"
                     /calculated_mol_wt=193732
     Region          13..354
                     /region_name="DUF3384"
                     /note="Domain of unknown function (DUF3384); pfam11864"
                     /db_xref="CDD:463376"
     Region          490..838
                     /region_name="Tuberin"
                     /note="pfam03542"
                     /db_xref="CDD:460965"
     Region          1078..>1443
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          1501..1687
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     CDS             1..1748
                     /gene="TSC2"
                     /coded_by="XM_061152565.1:193..5439"
                     /db_xref="GeneID:133063336"
ORIGIN      
        1 mgrgslvaql havealwkav sdllqperpp earhavlall kaivqgqgdr lgvlralffk
       61 vikdypsned lherlevfka ltdngrhity leeeladfvl qwmdvglsse fllvlvnlvk
      121 fnscyldeyi asmvhmvcll cvqtvssvdi evslqvldav vcynclpaes lplfivtlcr
      181 tinvkelcep cwklmrnllg thlghsaiyh mcrimedray medapllrga vffvgmalwg
      241 ahrlyslkns ptsvlpsfye amtcpnevvs yeivlsitrl ikkyrrdlqa vtwdillnii
      301 erllqqlqsl dspelsaivh dllstveelc dqnefhgsqe ryfelverca dqrpesslln
      361 lityraqsih pakdgwihnl qllmerffrs esrsavrikv ldvlsfvlli nrqfyeeeli
      421 nsvvisqlsh ipedrdhqvr klatqllvdl aegchthhfn slldiiekvi arslspppel
      481 eerdvaaysa sledvktavl gllvilqtkl yalpashatr vyetlvghiq lhykhsytlp
      541 iassirlqaf dfllqlrads lhrlglpskd glvrfspycv cdyleterss ekkaggplsp
      601 ptgppgpapa gpavrlgslp ysllfrvllq clkqesdwkv lklvlsklpe slrykvlift
      661 spcsvdqlsa alcsmlsgpk tlerlrgtpe gfsrtdlhla vvpvltalis yhnyldktrq
      721 remvycleqg liyrcasqcv valavcsvem pdvilkalpv lvvklthisa tasmaiplle
      781 flstlarlph lyrnfaaeqy asvfaislpy tnpskfnqyi vclahhviam wfircrlpfr
      841 kdfvpyitkg lrsnvllsfd dtpekdsfra rstslnerpk slriarppkq glnnsppmke
      901 lkessaadaf rcrsisvseh vvrsriqtsl tsaslgsade ssmaqaddnl knlhleltet
      961 cldmmaryvf snftavpkrs pvgefllagg rtktwlvgnk lvtvttsvgt gtrsllglds
     1021 gelqggpels sdpgvhvrqt keapaklesq agqqvyhgar drvrsmsggh glrvgaldta
     1081 ashfpsspts pgsqtapagq pekasagspl paqkektnla ayvplltqgw aeilvrrptg
     1141 ntswlmslen plspfssdin smplqelsna lmaaerfker rdtalyksls vpaagsakpp
     1201 ppprsntvas fsslcqsrcq grlhrsiswa dsavvleegg pgeavlsaep peledfeatl
     1261 gsdercrrsd afsrssstss qeeksfhaee lppggipier avssegsras vdlafqpsqp
     1321 lsksssspel qtlqdilgdp gdkaevgrls peakarsqsg ildgegvaws apgeerrgpa
     1381 qpegplpssc prspsglrpr gytisdsaps rrgkrverda fksragtsnt ekvpginpsf
     1441 vflqlyhspf fgdesnkpil lpnesfersv qlldqipsyd thkiavlyvg egqsnselai
     1501 lsnehgsyry tefltglgkl ielkdcqpdk vylggldvcg edgqftycwh ddimqavfhi
     1561 atlmptkdvd khrcdkkrhl gndfvsivyn dsgedfklgt ikgqfnfvhv iitpldyecn
     1621 lvslqcrkdm eglvdtsmak ivsdrnlpfv arqmalhanm asqvhhsrsn ptdiypskwi
     1681 arlrhikrlr qrireeahys sanlplmqth ppghakapaq apaeptpaye tgqrkrlvss
     1741 vddftefv
//
LOCUS       XP_061008549            1748 aa            linear   MAM 02-DEC-2023
DEFINITION  tuberin isoform X6 [Dama dama].
ACCESSION   XP_061008549
VERSION     XP_061008549.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152566.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1748
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1748
                     /product="tuberin isoform X6"
                     /calculated_mol_wt=193732
     Region          13..354
                     /region_name="DUF3384"
                     /note="Domain of unknown function (DUF3384); pfam11864"
                     /db_xref="CDD:463376"
     Region          490..838
                     /region_name="Tuberin"
                     /note="pfam03542"
                     /db_xref="CDD:460965"
     Region          1078..>1443
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          1501..1687
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     CDS             1..1748
                     /gene="TSC2"
                     /coded_by="XM_061152566.1:252..5498"
                     /db_xref="GeneID:133063336"
ORIGIN      
        1 mgrgslvaql havealwkav sdllqperpp earhavlall kaivqgqgdr lgvlralffk
       61 vikdypsned lherlevfka ltdngrhity leeeladfvl qwmdvglsse fllvlvnlvk
      121 fnscyldeyi asmvhmvcll cvqtvssvdi evslqvldav vcynclpaes lplfivtlcr
      181 tinvkelcep cwklmrnllg thlghsaiyh mcrimedray medapllrga vffvgmalwg
      241 ahrlyslkns ptsvlpsfye amtcpnevvs yeivlsitrl ikkyrrdlqa vtwdillnii
      301 erllqqlqsl dspelsaivh dllstveelc dqnefhgsqe ryfelverca dqrpesslln
      361 lityraqsih pakdgwihnl qllmerffrs esrsavrikv ldvlsfvlli nrqfyeeeli
      421 nsvvisqlsh ipedrdhqvr klatqllvdl aegchthhfn slldiiekvi arslspppel
      481 eerdvaaysa sledvktavl gllvilqtkl yalpashatr vyetlvghiq lhykhsytlp
      541 iassirlqaf dfllqlrads lhrlglpskd glvrfspycv cdyleterss ekkaggplsp
      601 ptgppgpapa gpavrlgslp ysllfrvllq clkqesdwkv lklvlsklpe slrykvlift
      661 spcsvdqlsa alcsmlsgpk tlerlrgtpe gfsrtdlhla vvpvltalis yhnyldktrq
      721 remvycleqg liyrcasqcv valavcsvem pdvilkalpv lvvklthisa tasmaiplle
      781 flstlarlph lyrnfaaeqy asvfaislpy tnpskfnqyi vclahhviam wfircrlpfr
      841 kdfvpyitkg lrsnvllsfd dtpekdsfra rstslnerpk slriarppkq glnnsppmke
      901 lkessaadaf rcrsisvseh vvrsriqtsl tsaslgsade ssmaqaddnl knlhleltet
      961 cldmmaryvf snftavpkrs pvgefllagg rtktwlvgnk lvtvttsvgt gtrsllglds
     1021 gelqggpels sdpgvhvrqt keapaklesq agqqvyhgar drvrsmsggh glrvgaldta
     1081 ashfpsspts pgsqtapagq pekasagspl paqkektnla ayvplltqgw aeilvrrptg
     1141 ntswlmslen plspfssdin smplqelsna lmaaerfker rdtalyksls vpaagsakpp
     1201 ppprsntvas fsslcqsrcq grlhrsiswa dsavvleegg pgeavlsaep peledfeatl
     1261 gsdercrrsd afsrssstss qeeksfhaee lppggipier avssegsras vdlafqpsqp
     1321 lsksssspel qtlqdilgdp gdkaevgrls peakarsqsg ildgegvaws apgeerrgpa
     1381 qpegplpssc prspsglrpr gytisdsaps rrgkrverda fksragtsnt ekvpginpsf
     1441 vflqlyhspf fgdesnkpil lpnesfersv qlldqipsyd thkiavlyvg egqsnselai
     1501 lsnehgsyry tefltglgkl ielkdcqpdk vylggldvcg edgqftycwh ddimqavfhi
     1561 atlmptkdvd khrcdkkrhl gndfvsivyn dsgedfklgt ikgqfnfvhv iitpldyecn
     1621 lvslqcrkdm eglvdtsmak ivsdrnlpfv arqmalhanm asqvhhsrsn ptdiypskwi
     1681 arlrhikrlr qrireeahys sanlplmqth ppghakapaq apaeptpaye tgqrkrlvss
     1741 vddftefv
//
LOCUS       XP_061008550            1747 aa            linear   MAM 02-DEC-2023
DEFINITION  tuberin isoform X7 [Dama dama].
ACCESSION   XP_061008550
VERSION     XP_061008550.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152567.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1747
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1747
                     /product="tuberin isoform X7"
                     /calculated_mol_wt=193749
     Region          54..419
                     /region_name="DUF3384"
                     /note="Domain of unknown function (DUF3384); pfam11864"
                     /db_xref="CDD:463376"
     Region          555..903
                     /region_name="Tuberin"
                     /note="pfam03542"
                     /db_xref="CDD:460965"
     Region          1098..>1438
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          1500..1686
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     CDS             1..1747
                     /gene="TSC2"
                     /coded_by="XM_061152567.1:150..5393"
                     /db_xref="GeneID:133063336"
ORIGIN      
        1 makpaskdsg lkekfkillg lgtprpnprs aegkqtefii taeilrelsv ecglnnrirv
       61 igqicevart kkfeehavea lwkavsdllq perppearha vlallkaivq gqgdrlgvlr
      121 alffkvikdy psnedlherl evfkaltdng rhityleeel adfvlqwmdv glssefllvl
      181 vnlvkfnscy ldeyiasmvh mvcllcvqtv ssvdievslq vldavvcync lpaeslplfi
      241 vtlcrtinvk elcepcwklm rnllgthlgh saiyhmcrim edraymedap llrgavffvg
      301 malwgahrly slknsptsvl psfyeamtcp nevvsyeivl sitrlikkyr rdlqavtwdi
      361 llniierllq qlqsldspel saivhdllst veelcdqnef hgsqeryfel vercadqrpe
      421 ssllnlityr aqsihpakdg wihnlqllme rffrsesrsa vrikvldvls fvllinrqfy
      481 eeelinsvvi sqlshipedr dhqvrklatq llvdlaegch thhfnslldi iekviarsls
      541 pppeleerdv aaysasledv ktavlgllvi lqtklyalpa shatrvyetl vghiqlhykh
      601 sytlpiassi rlqafdfllq lradslhrlg lpskdglvrf spycvcdyle terssekkag
      661 gplspptgpp gpapagpavr lgslpysllf rvllqclkqe sdwkvlklvl sklpeslryk
      721 vliftspcsv dqlsaalcsm lsgpktlerl rgtpegfsrt dlhlavvpvl talisyhnyl
      781 dktrqremvy cleqgliyrc asqcvvalav csvempdvil kalpvlvvkl thisatasma
      841 iplleflstl arlphlyrnf aaeqyasvfa islpytnpsk fnqyivclah hviamwfirc
      901 rlpfrkdfvp yitkglrsnv llsfddtpek dsfrarstsl nerpksriqt sltsaslgsa
      961 dessmaqadd nlknlhlelt etcldmmary vfsnftavpk rspvgeflla ggrtktwlvg
     1021 nklvtvttsv gtgtrsllgl dsgelqggpe lssdpgvhvr qtkeapakle sqagqqvyhg
     1081 ardrvrsmsg ghglrvgald taashfpssp tspgsqtapa gqpekasags plpaqkektn
     1141 laayvplltq gwaeilvrrp tgntswlmsl enplspfssd insmplqels nalmaaerfk
     1201 errdtalyks lsvpaagsak ppppprsntd savvleeggp geavlsaepp eledfeatlg
     1261 sdercrrsda fsrssstssq eeksfhaeel ppggipiera vssegsrasv dlafqpsqpl
     1321 sksssspelq tlqdilgdpg dkaevgrlsp eakarsqsgi ldgegvawsa pgeerrgpaq
     1381 pegplpsscp rspsglrprg ytisdsapsr rgkrverdaf ksragtsnte kvpginpsfv
     1441 flqlyhspff gdesnkpill pnesfersvq lldqipsydt hkiavlyvge gqsnselail
     1501 snehgsyryt efltglgkli elkdcqpdkv ylggldvcge dgqftycwhd dimqavfhia
     1561 tlmptkdvdk hrcdkkrhlg ndfvsivynd sgedfklgti kgqfnfvhvi itpldyecnl
     1621 vslqcrkdme glvdtsmaki vsdrnlpfva rqmalhanma sqvhhsrsnp tdiypskwia
     1681 rlrhikrlrq rireeahyss anlplmqthp pghakapaqa paeptpayet gqrkrlvssv
     1741 ddftefv
//
LOCUS       XP_061008551            1813 aa            linear   MAM 02-DEC-2023
DEFINITION  tuberin isoform X8 [Dama dama].
ACCESSION   XP_061008551
VERSION     XP_061008551.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152568.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1813
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1813
                     /product="tuberin isoform X8"
                     /calculated_mol_wt=201056
     Region          54..419
                     /region_name="DUF3384"
                     /note="Domain of unknown function (DUF3384); pfam11864"
                     /db_xref="CDD:463376"
     Region          555..903
                     /region_name="Tuberin"
                     /note="pfam03542"
                     /db_xref="CDD:460965"
     Region          1143..>1508
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          1566..1752
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     CDS             1..1813
                     /gene="TSC2"
                     /coded_by="XM_061152568.1:174..5615"
                     /db_xref="GeneID:133063336"
ORIGIN      
        1 makpaskdsg lkekfkillg lgtprpnprs aegkqtefii taeilrelsv ecglnnrirv
       61 igqicevart kkfeehavea lwkavsdllq perppearha vlallkaivq gqgdrlgvlr
      121 alffkvikdy psnedlherl evfkaltdng rhityleeel adfvlqwmdv glssefllvl
      181 vnlvkfnscy ldeyiasmvh mvcllcvqtv ssvdievslq vldavvcync lpaeslplfi
      241 vtlcrtinvk elcepcwklm rnllgthlgh saiyhmcrim edraymedap llrgavffvg
      301 malwgahrly slknsptsvl psfyeamtcp nevvsyeivl sitrlikkyr rdlqavtwdi
      361 llniierllq qlqsldspel saivhdllst veelcdqnef hgsqeryfel vercadqrpe
      421 ssllnlityr aqsihpakdg wihnlqllme rffrsesrsa vrikvldvls fvllinrqfy
      481 eeelinsvvi sqlshipedr dhqvrklatq llvdlaegch thhfnslldi iekviarsls
      541 pppeleerdv aaysasledv ktavlgllvi lqtklyalpa shatrvyetl vghiqlhykh
      601 sytlpiassi rlqafdfllq lradslhrlg lpskdglvrf spycvcdyle terssekkag
      661 gplspptgpp gpapagpavr lgslpysllf rvllqclkqe sdwkvlklvl sklpeslryk
      721 vliftspcsv dqlsaalcsm lsgpktlerl rgtpegfsrt dlhlavvpvl talisyhnyl
      781 dktrqremvy cleqgliyrc asqcvvalav csvempdvil kalpvlvvkl thisatasma
      841 iplleflstl arlphlyrnf aaeqyasvfa islpytnpsk fnqyivclah hviamwfirc
      901 rlpfrkdfvp yitkglrsnv llsfddtpek dsfrarstsl nerpkslria rppkqglnns
      961 ppmkelkess aadafrcrsi svsehvvrsr iqtsltsasl gsadessmaq addnlknlhl
     1021 eltetcldmm aryvfsnfta vpkrspvgef llaggrtktw lvgnklvtvt tsvgtgtrsl
     1081 lgldsgelqg gpelssdpgv hvrqtkeapa klesqagqqv yhgardrvrs msgghglrvg
     1141 aldtaashfp ssptspgsqt apagqpekas agsplpaqke ktnlaayvpl ltqgwaeilv
     1201 rrptgntswl mslenplspf ssdinsmplq elsnalmaae rfkerrdtal ykslsvpaag
     1261 sakppppprs ntvasfsslc qsrcqgrlhr siswadsavv leeggpgeav lsaeppeled
     1321 featlgsder crrsdafsrs sstssqeeks fhaeelppgg ipieravsse gsrasvdlaf
     1381 qpsqplskss sspelqtlqd ilgdpgdkae vgrlspeaka rsqsgildge gvawsapgee
     1441 rrgpaqpegp lpsscprsps glrprgytis dsapsrrgkr verdafksra gtsntekvpg
     1501 inpsfvflql yhspffgdes nkpillpnes fersvqlldq ipsydthkia vlyvgegqsn
     1561 selailsneh gsyryteflt glgklielkd cqpdkvylgg ldvcgedgqf tycwhddimq
     1621 avfhiatlmp tkdvdkhrcd kkrhlgndfv sivyndsged fklgtikgqf nfvhviitpl
     1681 dyecnlvslq crkdmeglvd tsmakivsdr nlpfvarqma lhanmasqvh hsrsnptdiy
     1741 pskwiarlrh ikrlrqrire eahyssanlp lmqthppgha kapaqapaep tpayetgqrk
     1801 rlvssvddft efv
//
LOCUS       XP_061008552            1746 aa            linear   MAM 02-DEC-2023
DEFINITION  tuberin isoform X9 [Dama dama].
ACCESSION   XP_061008552
VERSION     XP_061008552.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152569.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1746
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1746
                     /product="tuberin isoform X9"
                     /calculated_mol_wt=193662
     Region          54..419
                     /region_name="DUF3384"
                     /note="Domain of unknown function (DUF3384); pfam11864"
                     /db_xref="CDD:463376"
     Region          555..903
                     /region_name="Tuberin"
                     /note="pfam03542"
                     /db_xref="CDD:460965"
     Region          1097..>1437
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          1499..1685
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     CDS             1..1746
                     /gene="TSC2"
                     /coded_by="XM_061152569.1:173..5413"
                     /db_xref="GeneID:133063336"
ORIGIN      
        1 makpaskdsg lkekfkillg lgtprpnprs aegkqtefii taeilrelsv ecglnnrirv
       61 igqicevart kkfeehavea lwkavsdllq perppearha vlallkaivq gqgdrlgvlr
      121 alffkvikdy psnedlherl evfkaltdng rhityleeel adfvlqwmdv glssefllvl
      181 vnlvkfnscy ldeyiasmvh mvcllcvqtv ssvdievslq vldavvcync lpaeslplfi
      241 vtlcrtinvk elcepcwklm rnllgthlgh saiyhmcrim edraymedap llrgavffvg
      301 malwgahrly slknsptsvl psfyeamtcp nevvsyeivl sitrlikkyr rdlqavtwdi
      361 llniierllq qlqsldspel saivhdllst veelcdqnef hgsqeryfel vercadqrpe
      421 ssllnlityr aqsihpakdg wihnlqllme rffrsesrsa vrikvldvls fvllinrqfy
      481 eeelinsvvi sqlshipedr dhqvrklatq llvdlaegch thhfnslldi iekviarsls
      541 pppeleerdv aaysasledv ktavlgllvi lqtklyalpa shatrvyetl vghiqlhykh
      601 sytlpiassi rlqafdfllq lradslhrlg lpskdglvrf spycvcdyle terssekkag
      661 gplspptgpp gpapagpavr lgslpysllf rvllqclkqe sdwkvlklvl sklpeslryk
      721 vliftspcsv dqlsaalcsm lsgpktlerl rgtpegfsrt dlhlavvpvl talisyhnyl
      781 dktrqremvy cleqgliyrc asqcvvalav csvempdvil kalpvlvvkl thisatasma
      841 iplleflstl arlphlyrnf aaeqyasvfa islpytnpsk fnqyivclah hviamwfirc
      901 rlpfrkdfvp yitkglrsnv llsfddtpek dsfrarstsl nerpkriqts ltsaslgsad
      961 essmaqaddn lknlhlelte tcldmmaryv fsnftavpkr spvgefllag grtktwlvgn
     1021 klvtvttsvg tgtrsllgld sgelqggpel ssdpgvhvrq tkeapakles qagqqvyhga
     1081 rdrvrsmsgg hglrvgaldt aashfpsspt spgsqtapag qpekasagsp lpaqkektnl
     1141 aayvplltqg waeilvrrpt gntswlmsle nplspfssdi nsmplqelsn almaaerfke
     1201 rrdtalyksl svpaagsakp pppprsntds avvleeggpg eavlsaeppe ledfeatlgs
     1261 dercrrsdaf srssstssqe eksfhaeelp pggipierav ssegsrasvd lafqpsqpls
     1321 ksssspelqt lqdilgdpgd kaevgrlspe akarsqsgil dgegvawsap geerrgpaqp
     1381 egplpsscpr spsglrprgy tisdsapsrr gkrverdafk sragtsntek vpginpsfvf
     1441 lqlyhspffg desnkpillp nesfersvql ldqipsydth kiavlyvgeg qsnselails
     1501 nehgsyryte fltglgklie lkdcqpdkvy lggldvcged gqftycwhdd imqavfhiat
     1561 lmptkdvdkh rcdkkrhlgn dfvsivynds gedfklgtik gqfnfvhvii tpldyecnlv
     1621 slqcrkdmeg lvdtsmakiv sdrnlpfvar qmalhanmas qvhhsrsnpt diypskwiar
     1681 lrhikrlrqr ireeahyssa nlplmqthpp ghakapaqap aeptpayetg qrkrlvssvd
     1741 dftefv
//
LOCUS       XP_061008553            1646 aa            linear   MAM 02-DEC-2023
DEFINITION  tuberin isoform X10 [Dama dama].
ACCESSION   XP_061008553
VERSION     XP_061008553.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152570.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1646
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1646
                     /product="tuberin isoform X10"
                     /calculated_mol_wt=182177
     Region          <7..252
                     /region_name="DUF3384"
                     /note="Domain of unknown function (DUF3384); pfam11864"
                     /db_xref="CDD:463376"
     Region          388..736
                     /region_name="Tuberin"
                     /note="pfam03542"
                     /db_xref="CDD:460965"
     Region          976..>1341
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          1399..1585
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     CDS             1..1646
                     /gene="TSC2"
                     /coded_by="XM_061152570.1:456..5396"
                     /db_xref="GeneID:133063336"
ORIGIN      
        1 mdvglssefl lvlvnlvkfn scyldeyias mvhmvcllcv qtvssvdiev slqvldavvc
       61 ynclpaeslp lfivtlcrti nvkelcepcw klmrnllgth lghsaiyhmc rimedrayme
      121 dapllrgavf fvgmalwgah rlyslknspt svlpsfyeam tcpnevvsye ivlsitrlik
      181 kyrrdlqavt wdillniier llqqlqslds pelsaivhdl lstveelcdq nefhgsqery
      241 felvercadq rpessllnli tyraqsihpa kdgwihnlql lmerffrses rsavrikvld
      301 vlsfvllinr qfyeeelins vvisqlship edrdhqvrkl atqllvdlae gchthhfnsl
      361 ldiiekviar slspppelee rdvaaysasl edvktavlgl lvilqtklya lpashatrvy
      421 etlvghiqlh ykhsytlpia ssirlqafdf llqlradslh rlglpskdgl vrfspycvcd
      481 yleterssek kaggplsppt gppgpapagp avrlgslpys llfrvllqcl kqesdwkvlk
      541 lvlsklpesl rykvliftsp csvdqlsaal csmlsgpktl erlrgtpegf srtdlhlavv
      601 pvltalisyh nyldktrqre mvycleqgli yrcasqcvva lavcsvempd vilkalpvlv
      661 vklthisata smaipllefl stlarlphly rnfaaeqyas vfaislpytn pskfnqyivc
      721 lahhviamwf ircrlpfrkd fvpyitkglr snvllsfddt pekdsfrars tslnerpksl
      781 riarppkqgl nnsppmkelk essaadafrc rsisvsehvv rsriqtslts aslgsadess
      841 maqaddnlkn lhleltetcl dmmaryvfsn ftavpkrspv gefllaggrt ktwlvgnklv
      901 tvttsvgtgt rsllgldsge lqggpelssd pgvhvrqtke apaklesqag qqvyhgardr
      961 vrsmsgghgl rvgaldtaas hfpssptspg sqtapagqpe kasagsplpa qkektnlaay
     1021 vplltqgwae ilvrrptgnt swlmslenpl spfssdinsm plqelsnalm aaerfkerrd
     1081 talykslsvp aagsakpppp prsntvasfs slcqsrcqgr lhrsiswads avvleeggpg
     1141 eavlsaeppe ledfeatlgs dercrrsdaf srssstssqe eksfhaeelp pggipierav
     1201 ssegsrasvd lafqpsqpls ksssspelqt lqdilgdpgd kaevgrlspe akarsqsgil
     1261 dgegvawsap geerrgpaqp egplpsscpr spsglrprgy tisdsapsrr gkrverdafk
     1321 sragtsntek vpginpsfvf lqlyhspffg desnkpillp nesfersvql ldqipsydth
     1381 kiavlyvgeg qsnselails nehgsyryte fltglgklie lkdcqpdkvy lggldvcged
     1441 gqftycwhdd imqavfhiat lmptkdvdkh rcdkkrhlgn dfvsivynds gedfklgtik
     1501 gqfnfvhvii tpldyecnlv slqcrkdmeg lvdtsmakiv sdrnlpfvar qmalhanmas
     1561 qvhhsrsnpt diypskwiar lrhikrlrqr ireeahyssa nlplmqthpp ghakapaqap
     1621 aeptpayetg qrkrlvssvd dftefv
//
LOCUS       XP_061008554            1646 aa            linear   MAM 02-DEC-2023
DEFINITION  tuberin isoform X10 [Dama dama].
ACCESSION   XP_061008554
VERSION     XP_061008554.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152571.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1646
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1646
                     /product="tuberin isoform X10"
                     /calculated_mol_wt=182177
     Region          <7..252
                     /region_name="DUF3384"
                     /note="Domain of unknown function (DUF3384); pfam11864"
                     /db_xref="CDD:463376"
     Region          388..736
                     /region_name="Tuberin"
                     /note="pfam03542"
                     /db_xref="CDD:460965"
     Region          976..>1341
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          1399..1585
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     CDS             1..1646
                     /gene="TSC2"
                     /coded_by="XM_061152571.1:296..5236"
                     /db_xref="GeneID:133063336"
ORIGIN      
        1 mdvglssefl lvlvnlvkfn scyldeyias mvhmvcllcv qtvssvdiev slqvldavvc
       61 ynclpaeslp lfivtlcrti nvkelcepcw klmrnllgth lghsaiyhmc rimedrayme
      121 dapllrgavf fvgmalwgah rlyslknspt svlpsfyeam tcpnevvsye ivlsitrlik
      181 kyrrdlqavt wdillniier llqqlqslds pelsaivhdl lstveelcdq nefhgsqery
      241 felvercadq rpessllnli tyraqsihpa kdgwihnlql lmerffrses rsavrikvld
      301 vlsfvllinr qfyeeelins vvisqlship edrdhqvrkl atqllvdlae gchthhfnsl
      361 ldiiekviar slspppelee rdvaaysasl edvktavlgl lvilqtklya lpashatrvy
      421 etlvghiqlh ykhsytlpia ssirlqafdf llqlradslh rlglpskdgl vrfspycvcd
      481 yleterssek kaggplsppt gppgpapagp avrlgslpys llfrvllqcl kqesdwkvlk
      541 lvlsklpesl rykvliftsp csvdqlsaal csmlsgpktl erlrgtpegf srtdlhlavv
      601 pvltalisyh nyldktrqre mvycleqgli yrcasqcvva lavcsvempd vilkalpvlv
      661 vklthisata smaipllefl stlarlphly rnfaaeqyas vfaislpytn pskfnqyivc
      721 lahhviamwf ircrlpfrkd fvpyitkglr snvllsfddt pekdsfrars tslnerpksl
      781 riarppkqgl nnsppmkelk essaadafrc rsisvsehvv rsriqtslts aslgsadess
      841 maqaddnlkn lhleltetcl dmmaryvfsn ftavpkrspv gefllaggrt ktwlvgnklv
      901 tvttsvgtgt rsllgldsge lqggpelssd pgvhvrqtke apaklesqag qqvyhgardr
      961 vrsmsgghgl rvgaldtaas hfpssptspg sqtapagqpe kasagsplpa qkektnlaay
     1021 vplltqgwae ilvrrptgnt swlmslenpl spfssdinsm plqelsnalm aaerfkerrd
     1081 talykslsvp aagsakpppp prsntvasfs slcqsrcqgr lhrsiswads avvleeggpg
     1141 eavlsaeppe ledfeatlgs dercrrsdaf srssstssqe eksfhaeelp pggipierav
     1201 ssegsrasvd lafqpsqpls ksssspelqt lqdilgdpgd kaevgrlspe akarsqsgil
     1261 dgegvawsap geerrgpaqp egplpsscpr spsglrprgy tisdsapsrr gkrverdafk
     1321 sragtsntek vpginpsfvf lqlyhspffg desnkpillp nesfersvql ldqipsydth
     1381 kiavlyvgeg qsnselails nehgsyryte fltglgklie lkdcqpdkvy lggldvcged
     1441 gqftycwhdd imqavfhiat lmptkdvdkh rcdkkrhlgn dfvsivynds gedfklgtik
     1501 gqfnfvhvii tpldyecnlv slqcrkdmeg lvdtsmakiv sdrnlpfvar qmalhanmas
     1561 qvhhsrsnpt diypskwiar lrhikrlrqr ireeahyssa nlplmqthpp ghakapaqap
     1621 aeptpayetg qrkrlvssvd dftefv
//
LOCUS       XP_061008555             305 aa            linear   MAM 02-DEC-2023
DEFINITION  endonuclease III-like protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061008555
VERSION     XP_061008555.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152572.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..305
                     /product="endonuclease III-like protein 1 isoform X1"
                     /calculated_mol_wt=33463
     Region          123..300
                     /region_name="Nth"
                     /note="Endonuclease III [Replication, recombination and
                     repair]; COG0177"
                     /db_xref="CDD:439947"
     CDS             1..305
                     /gene="NTHL1"
                     /coded_by="XM_061152572.1:1..918"
                     /db_xref="GeneID:133063338"
ORIGIN      
        1 mnaagvrmvv trarnrgtga slqgggekaa plrsgeaaae grksygpvkr qrktrrlsva
       61 yeasesekge vperlqapsw epqdwrrqld nirtmrsgkd apvdqlgaeh cfdpsaspkv
      121 rryqvllslm lssqtkdqvt agamqrlrar gltvdsilqt ddstlgaliy pvgfwrskvk
      181 yikqtseilq qryggdipas vaelvalpgv gpkmahlama vawgtvsgia vdthvhrian
      241 rlrwtkkatr spedtrrale ewlprelwhe ingllvgfgq qtclpvhprc qaclnralcp
      301 aaegl
//
LOCUS       XP_061008557             299 aa            linear   MAM 02-DEC-2023
DEFINITION  endonuclease III-like protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061008557
VERSION     XP_061008557.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152574.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..299
                     /product="endonuclease III-like protein 1 isoform X2"
                     /calculated_mol_wt=32892
     Region          117..294
                     /region_name="Nth"
                     /note="Endonuclease III [Replication, recombination and
                     repair]; COG0177"
                     /db_xref="CDD:439947"
     CDS             1..299
                     /gene="NTHL1"
                     /coded_by="XM_061152574.1:17..916"
                     /db_xref="GeneID:133063338"
ORIGIN      
        1 mvvtrarnrg tgaslqggge kaaplrsgea aaegrksygp vkrqrktrrl svayeasese
       61 kgevperlqa pswepqdwrr qldnirtmrs gkdapvdqlg aehcfdpsas pkqvrryqvl
      121 lslmlssqtk dqvtagamqr lrargltvds ilqtddstlg aliypvgfwr skvkyikqts
      181 eilqqryggd ipasvaelva lpgvgpkmah lamavawgtv sgiavdthvh rianrlrwtk
      241 katrspedtr raleewlpre lwheingllv gfgqqtclpv hprcqaclnr alcpaaegl
//
LOCUS       XP_061008558             298 aa            linear   MAM 02-DEC-2023
DEFINITION  endonuclease III-like protein 1 isoform X3 [Dama dama].
ACCESSION   XP_061008558
VERSION     XP_061008558.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152575.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..298
                     /product="endonuclease III-like protein 1 isoform X3"
                     /calculated_mol_wt=32763
     Region          116..293
                     /region_name="Nth"
                     /note="Endonuclease III [Replication, recombination and
                     repair]; COG0177"
                     /db_xref="CDD:439947"
     CDS             1..298
                     /gene="NTHL1"
                     /coded_by="XM_061152575.1:11..907"
                     /db_xref="GeneID:133063338"
ORIGIN      
        1 mvvtrarnrg tgaslqggge kaaplrsgea aagrksygpv krqrktrrls vayeasesek
       61 gevperlqap swepqdwrrq ldnirtmrsg kdapvdqlga ehcfdpsasp kqvrryqvll
      121 slmlssqtkd qvtagamqrl rargltvdsi lqtddstlga liypvgfwrs kvkyikqtse
      181 ilqqryggdi pasvaelval pgvgpkmahl amavawgtvs giavdthvhr ianrlrwtkk
      241 atrspedtrr aleewlprel wheingllvg fgqqtclpvh prcqaclnra lcpaaegl
//
LOCUS       XP_061008559             308 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-related protein Rab-26 isoform X1 [Dama dama].
ACCESSION   XP_061008559
VERSION     XP_061008559.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152576.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..308
                     /product="ras-related protein Rab-26 isoform X1"
                     /calculated_mol_wt=33650
     Region          79..306
                     /region_name="Rab26"
                     /note="Rab GTPase family 26 (Rab26); cd04112"
                     /db_xref="CDD:206695"
     Site            84..91
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206695"
     Site            order(86..92,102,109..110,174,229..230,232,259..261)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206695"
     Site            order(92..103,108..109)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206695"
     Site            order(102,108..116)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206695"
     Site            order(108,112..116,155..157,164,166)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206695"
     Site            110
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206695"
     Site            order(111,113..115,168,170,177..178,181,185,187..190,277)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206695"
     Site            order(111..112,114,170..171,178,180,182..184)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206695"
     Site            111..115
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206695"
     Site            166..170
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206695"
     Site            171..174
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206695"
     Site            order(174,176..186)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206695"
     Site            177..182
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206695"
     Site            185..189
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206695"
     Site            194..199
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206695"
     Site            222..226
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206695"
     Site            229..232
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206695"
     Site            259..261
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206695"
     Site            275..279
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206695"
     Site            303..306
                     /site_type="other"
                     /note="putative lipid modification site [posttranslational
                     modification]"
                     /db_xref="CDD:206695"
     CDS             1..308
                     /gene="RAB26"
                     /coded_by="XM_061152576.1:483..1409"
                     /db_xref="GeneID:133063339"
ORIGIN      
        1 mkaaapalpl mergqnllee avrgpgpmsp qallhlqtfs tpaphpraps gqassgetgp
       61 spggvprypg alcpfpvpqv mlvgdsgvgk tcllvrfkdg aflagtfist vgidfrvegr
      121 rwseenqevg lrtepdqrrr gvvdsgvhrs sspqnkvvdv dgmkvklqiw dtagqerfrs
      181 vthayyrdah allllydvtn kasfdsiqaw lmeiqehaqd dvvlmllgnk vdsaqeravk
      241 redaeklakd yglpfmetsa ktglnvdlaf taiakelkqr ctkapseprf rlhdyikkeg
      301 rgasccrp
//
LOCUS       XP_061008560             294 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-related protein Rab-26 isoform X2 [Dama dama].
ACCESSION   XP_061008560
VERSION     XP_061008560.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152577.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..294
                     /product="ras-related protein Rab-26 isoform X2"
                     /calculated_mol_wt=32040
     Region          64..292
                     /region_name="Rab26"
                     /note="Rab GTPase family 26 (Rab26); cd04112"
                     /db_xref="CDD:206695"
     Site            64..65
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206695"
     Site            70..77
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206695"
     Site            order(72..78,88,95..96,160,215..216,218,245..247)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206695"
     Site            order(78..89,94..95)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206695"
     Site            order(88,94..102)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206695"
     Site            order(94,98..102,141..143,150,152)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206695"
     Site            96
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206695"
     Site            order(97,99..101,154,156,163..164,167,171,173..176,263)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206695"
     Site            order(97..98,100,156..157,164,166,168..170)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206695"
     Site            97..101
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206695"
     Site            152..156
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206695"
     Site            157..160
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206695"
     Site            order(160,162..172)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206695"
     Site            163..168
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206695"
     Site            171..175
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206695"
     Site            180..185
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206695"
     Site            208..212
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206695"
     Site            215..218
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206695"
     Site            245..247
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206695"
     Site            261..265
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206695"
     Site            289..292
                     /site_type="other"
                     /note="putative lipid modification site [posttranslational
                     modification]"
                     /db_xref="CDD:206695"
     CDS             1..294
                     /gene="RAB26"
                     /coded_by="XM_061152577.1:134..1018"
                     /db_xref="GeneID:133063339"
ORIGIN      
        1 msrkktpksk agsapatsal paangprpvr pgtarpgpea ppngppqpgr ssiggggdfy
       61 dvafkvmlvg dsgvgktcll vrfkdgafla gtfistvgid frvegrrwse enqevglrte
      121 pdqrrrgvvd sgvhrssspq nkvvdvdgmk vklqiwdtag qerfrsvtha yyrdahalll
      181 lydvtnkasf dsiqawlmei qehaqddvvl mllgnkvdsa qeravkreda eklakdyglp
      241 fmetsaktgl nvdlaftaia kelkqrctka pseprfrlhd yikkegrgas ccrp
//
LOCUS       XP_061008561             270 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-related protein Rab-26 isoform X3 [Dama dama].
ACCESSION   XP_061008561
VERSION     XP_061008561.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152578.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..270
                     /product="ras-related protein Rab-26 isoform X3"
                     /calculated_mol_wt=29291
     Region          79..268
                     /region_name="Rab26"
                     /note="Rab GTPase family 26 (Rab26); cd04112"
                     /db_xref="CDD:206695"
     Site            84..91
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206695"
     Site            order(86..92,102,109..110,136,191..192,194,221..223)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206695"
     Site            order(92..103,108..109)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206695"
     Site            order(102,108..116)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206695"
     Site            order(108,112..119,126,128)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206695"
     Site            110
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206695"
     Site            order(111,113..115,130,132,139..140,143,147,149..152,239)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206695"
     Site            order(111..112,114,132..133,140,142,144..146)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206695"
     Site            111..115
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206695"
     Site            128..132
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206695"
     Site            133..136
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206695"
     Site            order(136,138..148)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206695"
     Site            139..144
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206695"
     Site            147..151
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206695"
     Site            156..161
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206695"
     Site            184..188
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206695"
     Site            191..194
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206695"
     Site            221..223
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206695"
     Site            237..241
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206695"
     Site            265..268
                     /site_type="other"
                     /note="putative lipid modification site [posttranslational
                     modification]"
                     /db_xref="CDD:206695"
     CDS             1..270
                     /gene="RAB26"
                     /coded_by="XM_061152578.1:476..1288"
                     /db_xref="GeneID:133063339"
ORIGIN      
        1 mkaaapalpl mergqnllee avrgpgpmsp qallhlqtfs tpaphpraps gqassgetgp
       61 spggvprypg alcpfpvpqv mlvgdsgvgk tcllvrfkdg aflagtfist vgidfrnkvv
      121 dvdgmkvklq iwdtagqerf rsvthayyrd ahallllydv tnkasfdsiq awlmeiqeha
      181 qddvvlmllg nkvdsaqera vkredaekla kdyglpfmet saktglnvdl aftaiakelk
      241 qrctkapsep rfrlhdyikk egrgasccrp
//
LOCUS       XP_061008562             267 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-related protein Rab-26 isoform X4 [Dama dama].
ACCESSION   XP_061008562
VERSION     XP_061008562.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152579.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..267
                     /product="ras-related protein Rab-26 isoform X4"
                     /calculated_mol_wt=28817
     Region          79..>249
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            84..91
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206648"
     Site            110
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            114..116
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            171..174
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            order(173..174,190..191)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     Site            229..232
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     CDS             1..267
                     /gene="RAB26"
                     /coded_by="XM_061152579.1:495..1298"
                     /db_xref="GeneID:133063339"
ORIGIN      
        1 mkaaapalpl mergqnllee avrgpgpmsp qallhlqtfs tpaphpraps gqassgetgp
       61 spggvprypg alcpfpvpqv mlvgdsgvgk tcllvrfkdg aflagtfist vgidfrvegr
      121 rwseenqevg lrtepdqrrr gvvdsgvhrs sspqnkvvdv dgmkvklqiw dtagqerfrs
      181 vthayyrdah allllydvtn kasfdsiqaw lmeiqehaqd dvvlmllgnk vdsaqeravk
      241 redaeklakg aetalhqgpq raplpaa
//
LOCUS       XP_061008563             258 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-related protein Rab-26 isoform X5 [Dama dama].
ACCESSION   XP_061008563
VERSION     XP_061008563.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152580.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..258
                     /product="ras-related protein Rab-26 isoform X5"
                     /calculated_mol_wt=28671
     Region          29..256
                     /region_name="Rab26"
                     /note="Rab GTPase family 26 (Rab26); cd04112"
                     /db_xref="CDD:206695"
     Site            34..41
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206695"
     Site            order(36..42,52,59..60,124,179..180,182,209..211)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206695"
     Site            order(42..53,58..59)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206695"
     Site            order(52,58..66)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206695"
     Site            order(58,62..66,105..107,114,116)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206695"
     Site            60
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206695"
     Site            order(61,63..65,118,120,127..128,131,135,137..140,227)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206695"
     Site            order(61..62,64,120..121,128,130,132..134)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206695"
     Site            61..65
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206695"
     Site            116..120
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206695"
     Site            121..124
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206695"
     Site            order(124,126..136)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206695"
     Site            127..132
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206695"
     Site            135..139
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206695"
     Site            144..149
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206695"
     Site            172..176
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206695"
     Site            179..182
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206695"
     Site            209..211
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206695"
     Site            225..229
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206695"
     Site            253..256
                     /site_type="other"
                     /note="putative lipid modification site [posttranslational
                     modification]"
                     /db_xref="CDD:206695"
     CDS             1..258
                     /gene="RAB26"
                     /coded_by="XM_061152580.1:16..792"
                     /db_xref="GeneID:133063339"
ORIGIN      
        1 marlpsappr ptpggqgrtr gpaevrawqv mlvgdsgvgk tcllvrfkdg aflagtfist
       61 vgidfrvegr rwseenqevg lrtepdqrrr gvvdsgvhrs sspqnkvvdv dgmkvklqiw
      121 dtagqerfrs vthayyrdah allllydvtn kasfdsiqaw lmeiqehaqd dvvlmllgnk
      181 vdsaqeravk redaeklakd yglpfmetsa ktglnvdlaf taiakelkqr ctkapseprf
      241 rlhdyikkeg rgasccrp
//
LOCUS       XP_061008564             256 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-related protein Rab-26 isoform X6 [Dama dama].
ACCESSION   XP_061008564
VERSION     XP_061008564.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152581.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..256
                     /product="ras-related protein Rab-26 isoform X6"
                     /calculated_mol_wt=27681
     Region          <6..>52
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          64..254
                     /region_name="Rab26"
                     /note="Rab GTPase family 26 (Rab26); cd04112"
                     /db_xref="CDD:206695"
     Site            64..65
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206695"
     Site            70..77
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206695"
     Site            order(72..78,88,95..96,122,177..178,180,207..209)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206695"
     Site            order(78..89,94..95)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206695"
     Site            order(88,94..102)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206695"
     Site            order(94,98..105,112,114)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206695"
     Site            96
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206695"
     Site            order(97,99..101,116,118,125..126,129,133,135..138,225)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206695"
     Site            order(97..98,100,118..119,126,128,130..132)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206695"
     Site            97..101
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206695"
     Site            114..118
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206695"
     Site            119..122
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206695"
     Site            order(122,124..134)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206695"
     Site            125..130
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206695"
     Site            133..137
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206695"
     Site            142..147
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206695"
     Site            170..174
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206695"
     Site            177..180
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206695"
     Site            207..209
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206695"
     Site            223..227
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206695"
     Site            251..254
                     /site_type="other"
                     /note="putative lipid modification site [posttranslational
                     modification]"
                     /db_xref="CDD:206695"
     CDS             1..256
                     /gene="RAB26"
                     /coded_by="XM_061152581.1:134..904"
                     /db_xref="GeneID:133063339"
ORIGIN      
        1 msrkktpksk agsapatsal paangprpvr pgtarpgpea ppngppqpgr ssiggggdfy
       61 dvafkvmlvg dsgvgktcll vrfkdgafla gtfistvgid frnkvvdvdg mkvklqiwdt
      121 agqerfrsvt hayyrdahal lllydvtnka sfdsiqawlm eiqehaqddv vlmllgnkvd
      181 saqeravkre daeklakdyg lpfmetsakt glnvdlafta iakelkqrct kapseprfrl
      241 hdyikkegrg asccrp
//
LOCUS       XP_061008566             669 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase TRAF7 isoform X1 [Dama dama].
ACCESSION   XP_061008566
VERSION     XP_061008566.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152583.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..669
                     /product="E3 ubiquitin-protein ligase TRAF7 isoform X1"
                     /calculated_mol_wt=74307
     Region          123..167
                     /region_name="mRING-HC-C3HC3D_TRAF7"
                     /note="Modified RING finger, HC subclass (C3HC3D-type),
                     found in tumor necrosis factor (TNF) receptor-associated
                     factor 7 (TRAF7) and similar proteins; cd16644"
                     /db_xref="CDD:438306"
     Region          207..>268
                     /region_name="Sina"
                     /note="Seven in absentia protein family; pfam03145"
                     /db_xref="CDD:460824"
     Region          281..321
                     /region_name="DD_cGKI"
                     /note="Dimerization/Docking domain of Cyclic GMP-dependent
                     Protein Kinase I; cl17044"
                     /db_xref="CDD:473057"
     Region          282..>372
                     /region_name="PRK03918"
                     /note="DNA double-strand break repair ATPase Rad50"
                     /db_xref="CDD:235175"
     Site            order(282..283,286,289..290,293..294,297,300..301,304,
                     307..308,311,314..315,318..319,321)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:213373"
     Site            order(298..299,301,303)
                     /site_type="other"
                     /note="putative GKAP docking site [polypeptide binding]"
                     /db_xref="CDD:213373"
     Region          <386..667
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          442..476
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          481..516
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          526..555
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          561..595
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          603..638
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          645..667
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..669
                     /gene="TRAF7"
                     /coded_by="XM_061152583.1:197..2206"
                     /db_xref="GeneID:133063341"
ORIGIN      
        1 mssgkgaryn rfsggpsnlp tpdtagtrme ttfgpafsav ttitkadgts tykqhrrtps
       61 sssslayspr deedsmppis tprrsdsais vrslhsessm slrstfslpe eeeepeplvf
      121 aeqpsvklcc qlccsvfkdp vittcghtfc rrcalksekc pvdnakltvv vnniavaeqi
      181 gelfihcrhg cravgggkps vfevdprgcp ftiklsarkd hegscdyrpv rcpnnpncpp
      241 llkmnleahl kecehikcph skygctfign qdtyethlet crfeglkefl qqtddrfhem
      301 hvalaqkdqe iaflrsmlgk lsekidqlek slelkfdvld enqsklsedl mefrrdasml
      361 ndelshinar lnmgilgsyd pqqifkckgt fvghqgpvwc lcvysmgdll fsgssdktik
      421 vwdtcttykc qktleghdgi vlalciqgck lysgsadcti ivwdiqnlqk vntirahdnp
      481 vctlvsshnm lfsgslkaik vwdivgtelk lkkeltglnh wvralvaaqs ylysgsyqti
      541 kiwdirtldc ihvlqtsggs vysiavtnhh ivcgtyenli hvwdieskeq vrtltghvgt
      601 vyalavistp dqtkvfsasy drslrvwsmd nmictqtllr hqgsvtalav srgrlfsgav
      661 dstvkvwtc
//
LOCUS       XP_061008567             669 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase TRAF7 isoform X1 [Dama dama].
ACCESSION   XP_061008567
VERSION     XP_061008567.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152584.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..669
                     /product="E3 ubiquitin-protein ligase TRAF7 isoform X1"
                     /calculated_mol_wt=74307
     Region          123..167
                     /region_name="mRING-HC-C3HC3D_TRAF7"
                     /note="Modified RING finger, HC subclass (C3HC3D-type),
                     found in tumor necrosis factor (TNF) receptor-associated
                     factor 7 (TRAF7) and similar proteins; cd16644"
                     /db_xref="CDD:438306"
     Region          207..>268
                     /region_name="Sina"
                     /note="Seven in absentia protein family; pfam03145"
                     /db_xref="CDD:460824"
     Region          281..321
                     /region_name="DD_cGKI"
                     /note="Dimerization/Docking domain of Cyclic GMP-dependent
                     Protein Kinase I; cl17044"
                     /db_xref="CDD:473057"
     Region          282..>372
                     /region_name="PRK03918"
                     /note="DNA double-strand break repair ATPase Rad50"
                     /db_xref="CDD:235175"
     Site            order(282..283,286,289..290,293..294,297,300..301,304,
                     307..308,311,314..315,318..319,321)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:213373"
     Site            order(298..299,301,303)
                     /site_type="other"
                     /note="putative GKAP docking site [polypeptide binding]"
                     /db_xref="CDD:213373"
     Region          <386..667
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          442..476
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          481..516
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          526..555
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          561..595
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          603..638
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          645..667
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..669
                     /gene="TRAF7"
                     /coded_by="XM_061152584.1:166..2175"
                     /db_xref="GeneID:133063341"
ORIGIN      
        1 mssgkgaryn rfsggpsnlp tpdtagtrme ttfgpafsav ttitkadgts tykqhrrtps
       61 sssslayspr deedsmppis tprrsdsais vrslhsessm slrstfslpe eeeepeplvf
      121 aeqpsvklcc qlccsvfkdp vittcghtfc rrcalksekc pvdnakltvv vnniavaeqi
      181 gelfihcrhg cravgggkps vfevdprgcp ftiklsarkd hegscdyrpv rcpnnpncpp
      241 llkmnleahl kecehikcph skygctfign qdtyethlet crfeglkefl qqtddrfhem
      301 hvalaqkdqe iaflrsmlgk lsekidqlek slelkfdvld enqsklsedl mefrrdasml
      361 ndelshinar lnmgilgsyd pqqifkckgt fvghqgpvwc lcvysmgdll fsgssdktik
      421 vwdtcttykc qktleghdgi vlalciqgck lysgsadcti ivwdiqnlqk vntirahdnp
      481 vctlvsshnm lfsgslkaik vwdivgtelk lkkeltglnh wvralvaaqs ylysgsyqti
      541 kiwdirtldc ihvlqtsggs vysiavtnhh ivcgtyenli hvwdieskeq vrtltghvgt
      601 vyalavistp dqtkvfsasy drslrvwsmd nmictqtllr hqgsvtalav srgrlfsgav
      661 dstvkvwtc
//
LOCUS       XP_061008568             669 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase TRAF7 isoform X1 [Dama dama].
ACCESSION   XP_061008568
VERSION     XP_061008568.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152585.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..669
                     /product="E3 ubiquitin-protein ligase TRAF7 isoform X1"
                     /calculated_mol_wt=74307
     Region          123..167
                     /region_name="mRING-HC-C3HC3D_TRAF7"
                     /note="Modified RING finger, HC subclass (C3HC3D-type),
                     found in tumor necrosis factor (TNF) receptor-associated
                     factor 7 (TRAF7) and similar proteins; cd16644"
                     /db_xref="CDD:438306"
     Region          207..>268
                     /region_name="Sina"
                     /note="Seven in absentia protein family; pfam03145"
                     /db_xref="CDD:460824"
     Region          281..321
                     /region_name="DD_cGKI"
                     /note="Dimerization/Docking domain of Cyclic GMP-dependent
                     Protein Kinase I; cl17044"
                     /db_xref="CDD:473057"
     Region          282..>372
                     /region_name="PRK03918"
                     /note="DNA double-strand break repair ATPase Rad50"
                     /db_xref="CDD:235175"
     Site            order(282..283,286,289..290,293..294,297,300..301,304,
                     307..308,311,314..315,318..319,321)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:213373"
     Site            order(298..299,301,303)
                     /site_type="other"
                     /note="putative GKAP docking site [polypeptide binding]"
                     /db_xref="CDD:213373"
     Region          <386..667
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          442..476
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          481..516
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          526..555
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          561..595
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          603..638
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          645..667
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..669
                     /gene="TRAF7"
                     /coded_by="XM_061152585.1:217..2226"
                     /db_xref="GeneID:133063341"
ORIGIN      
        1 mssgkgaryn rfsggpsnlp tpdtagtrme ttfgpafsav ttitkadgts tykqhrrtps
       61 sssslayspr deedsmppis tprrsdsais vrslhsessm slrstfslpe eeeepeplvf
      121 aeqpsvklcc qlccsvfkdp vittcghtfc rrcalksekc pvdnakltvv vnniavaeqi
      181 gelfihcrhg cravgggkps vfevdprgcp ftiklsarkd hegscdyrpv rcpnnpncpp
      241 llkmnleahl kecehikcph skygctfign qdtyethlet crfeglkefl qqtddrfhem
      301 hvalaqkdqe iaflrsmlgk lsekidqlek slelkfdvld enqsklsedl mefrrdasml
      361 ndelshinar lnmgilgsyd pqqifkckgt fvghqgpvwc lcvysmgdll fsgssdktik
      421 vwdtcttykc qktleghdgi vlalciqgck lysgsadcti ivwdiqnlqk vntirahdnp
      481 vctlvsshnm lfsgslkaik vwdivgtelk lkkeltglnh wvralvaaqs ylysgsyqti
      541 kiwdirtldc ihvlqtsggs vysiavtnhh ivcgtyenli hvwdieskeq vrtltghvgt
      601 vyalavistp dqtkvfsasy drslrvwsmd nmictqtllr hqgsvtalav srgrlfsgav
      661 dstvkvwtc
//
LOCUS       XP_061008569             667 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase TRAF7 isoform X2 [Dama dama].
ACCESSION   XP_061008569
VERSION     XP_061008569.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152586.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..667
                     /product="E3 ubiquitin-protein ligase TRAF7 isoform X2"
                     /calculated_mol_wt=74087
     Region          123..167
                     /region_name="mRING-HC-C3HC3D_TRAF7"
                     /note="Modified RING finger, HC subclass (C3HC3D-type),
                     found in tumor necrosis factor (TNF) receptor-associated
                     factor 7 (TRAF7) and similar proteins; cd16644"
                     /db_xref="CDD:438306"
     Region          207..>276
                     /region_name="Sina"
                     /note="Seven in absentia protein family; pfam03145"
                     /db_xref="CDD:460824"
     Region          279..319
                     /region_name="DD_cGKI"
                     /note="Dimerization/Docking domain of Cyclic GMP-dependent
                     Protein Kinase I; cl17044"
                     /db_xref="CDD:473057"
     Region          280..>370
                     /region_name="PRK03918"
                     /note="DNA double-strand break repair ATPase Rad50"
                     /db_xref="CDD:235175"
     Site            order(280..281,284,287..288,291..292,295,298..299,302,
                     305..306,309,312..313,316..317,319)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:213373"
     Site            order(296..297,299,301)
                     /site_type="other"
                     /note="putative GKAP docking site [polypeptide binding]"
                     /db_xref="CDD:213373"
     Region          <384..665
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          440..474
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          479..514
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          524..553
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          559..593
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          601..636
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          643..665
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..667
                     /gene="TRAF7"
                     /coded_by="XM_061152586.1:197..2200"
                     /db_xref="GeneID:133063341"
ORIGIN      
        1 mssgkgaryn rfsggpsnlp tpdtagtrme ttfgpafsav ttitkadgts tykqhrrtps
       61 sssslayspr deedsmppis tprrsdsais vrslhsessm slrstfslpe eeeepeplvf
      121 aeqpsvklcc qlccsvfkdp vittcghtfc rrcalksekc pvdnakltvv vnniavaeqi
      181 gelfihcrhg cravgggkps vfevdprgcp ftiklsarkd hegscdyrpv rcpnnpncpp
      241 llkmnleahl kecehikcph skctfignqd tyethletcr feglkeflqq tddrfhemhv
      301 alaqkdqeia flrsmlgkls ekidqleksl elkfdvlden qsklsedlme frrdasmlnd
      361 elshinarln mgilgsydpq qifkckgtfv ghqgpvwclc vysmgdllfs gssdktikvw
      421 dtcttykcqk tleghdgivl alciqgckly sgsadctiiv wdiqnlqkvn tirahdnpvc
      481 tlvsshnmlf sgslkaikvw divgtelklk keltglnhwv ralvaaqsyl ysgsyqtiki
      541 wdirtldcih vlqtsggsvy siavtnhhiv cgtyenlihv wdieskeqvr tltghvgtvy
      601 alavistpdq tkvfsasydr slrvwsmdnm ictqtllrhq gsvtalavsr grlfsgavds
      661 tvkvwtc
//
LOCUS       XP_061008570             570 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase TRAF7 isoform X3 [Dama dama].
ACCESSION   XP_061008570
VERSION     XP_061008570.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152587.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..570
                     /product="E3 ubiquitin-protein ligase TRAF7 isoform X3"
                     /calculated_mol_wt=63780
     Region          24..68
                     /region_name="mRING-HC-C3HC3D_TRAF7"
                     /note="Modified RING finger, HC subclass (C3HC3D-type),
                     found in tumor necrosis factor (TNF) receptor-associated
                     factor 7 (TRAF7) and similar proteins; cd16644"
                     /db_xref="CDD:438306"
     Region          108..>169
                     /region_name="Sina"
                     /note="Seven in absentia protein family; pfam03145"
                     /db_xref="CDD:460824"
     Region          183..>273
                     /region_name="PRK03918"
                     /note="DNA double-strand break repair ATPase Rad50"
                     /db_xref="CDD:235175"
     Region          <287..568
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          343..377
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          382..417
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          427..456
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          462..496
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          504..539
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          546..568
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..570
                     /gene="TRAF7"
                     /coded_by="XM_061152587.1:209..1921"
                     /db_xref="GeneID:133063341"
ORIGIN      
        1 mslrstfslp eeeeepeplv faeqpsvklc cqlccsvfkd pvittcghtf crrcalksek
       61 cpvdnakltv vvnniavaeq igelfihcrh gcravgggkp svfevdprgc pftiklsark
      121 dhegscdyrp vrcpnnpncp pllkmnleah lkecehikcp hskygctfig nqdtyethle
      181 tcrfeglkef lqqtddrfhe mhvalaqkdq eiaflrsmlg klsekidqle kslelkfdvl
      241 denqsklsed lmefrrdasm lndelshina rlnmgilgsy dpqqifkckg tfvghqgpvw
      301 clcvysmgdl lfsgssdkti kvwdtcttyk cqktleghdg ivlalciqgc klysgsadct
      361 iivwdiqnlq kvntirahdn pvctlvsshn mlfsgslkai kvwdivgtel klkkeltgln
      421 hwvralvaaq sylysgsyqt ikiwdirtld cihvlqtsgg svysiavtnh hivcgtyenl
      481 ihvwdieske qvrtltghvg tvyalavist pdqtkvfsas ydrslrvwsm dnmictqtll
      541 rhqgsvtala vsrgrlfsga vdstvkvwtc
//
LOCUS       XP_061008571             328 aa            linear   MAM 02-DEC-2023
DEFINITION  target of rapamycin complex subunit LST8 isoform X1 [Dama dama].
ACCESSION   XP_061008571
VERSION     XP_061008571.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152588.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..328
                     /product="target of rapamycin complex subunit LST8 isoform
                     X1"
                     /calculated_mol_wt=36032
     Region          <10..322
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          49..85
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          91..129
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          133..169
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          176..219
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          226..260
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          275..301
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..328
                     /gene="MLST8"
                     /coded_by="XM_061152588.1:126..1112"
                     /db_xref="GeneID:133063342"
ORIGIN      
        1 mntspgtvgs dpvilatagy dhtvrfwqah sgictrtvqh qdstqqvnal eitpdrtmia
       61 aagyqhirmy dlnsnnpnpi isydgvnkni asvgfhedgr wmytggedct ariwdlrsrn
      121 lqcqrifqvn apincvclhp nqaelivgdq sgaihiwdlk tdhneqlipe pevsitsahi
      181 dpdasymaav nstgncyvwn ltggigdevt qlipktkipa htryalqcrf spdstllatc
      241 sadqtckiwr tsnfslmtel sikssnpges srgwmwgcaf sgdsqyivta ssdnlarlwc
      301 vetgeikrey gghqkavvcl afndsvlg
//
LOCUS       XP_061008572             328 aa            linear   MAM 02-DEC-2023
DEFINITION  target of rapamycin complex subunit LST8 isoform X1 [Dama dama].
ACCESSION   XP_061008572
VERSION     XP_061008572.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152589.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..328
                     /product="target of rapamycin complex subunit LST8 isoform
                     X1"
                     /calculated_mol_wt=36032
     Region          <10..322
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          49..85
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          91..129
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          133..169
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          176..219
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          226..260
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          275..301
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..328
                     /gene="MLST8"
                     /coded_by="XM_061152589.1:54..1040"
                     /db_xref="GeneID:133063342"
ORIGIN      
        1 mntspgtvgs dpvilatagy dhtvrfwqah sgictrtvqh qdstqqvnal eitpdrtmia
       61 aagyqhirmy dlnsnnpnpi isydgvnkni asvgfhedgr wmytggedct ariwdlrsrn
      121 lqcqrifqvn apincvclhp nqaelivgdq sgaihiwdlk tdhneqlipe pevsitsahi
      181 dpdasymaav nstgncyvwn ltggigdevt qlipktkipa htryalqcrf spdstllatc
      241 sadqtckiwr tsnfslmtel sikssnpges srgwmwgcaf sgdsqyivta ssdnlarlwc
      301 vetgeikrey gghqkavvcl afndsvlg
//
LOCUS       XP_061008573             326 aa            linear   MAM 02-DEC-2023
DEFINITION  target of rapamycin complex subunit LST8 isoform X2 [Dama dama].
ACCESSION   XP_061008573
VERSION     XP_061008573.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152590.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..326
                     /product="target of rapamycin complex subunit LST8 isoform
                     X2"
                     /calculated_mol_wt=35803
     Region          <10..320
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          47..83
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          89..127
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          131..167
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          174..217
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          224..258
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          273..299
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..326
                     /gene="MLST8"
                     /coded_by="XM_061152590.1:126..1106"
                     /db_xref="GeneID:133063342"
ORIGIN      
        1 mntspgtvgs dpvilatagy dhtvrfwqah sgictrtvqh qdsqvnalei tpdrtmiaaa
       61 gyqhirmydl nsnnpnpiis ydgvnknias vgfhedgrwm ytggedctar iwdlrsrnlq
      121 cqrifqvnap incvclhpnq aelivgdqsg aihiwdlktd hneqlipepe vsitsahidp
      181 dasymaavns tgncyvwnlt ggigdevtql ipktkipaht ryalqcrfsp dstllatcsa
      241 dqtckiwrts nfslmtelsi kssnpgessr gwmwgcafsg dsqyivtass dnlarlwcve
      301 tgeikreygg hqkavvclaf ndsvlg
//
LOCUS       XP_061008574             325 aa            linear   MAM 02-DEC-2023
DEFINITION  target of rapamycin complex subunit LST8 isoform X3 [Dama dama].
ACCESSION   XP_061008574
VERSION     XP_061008574.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152591.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..325
                     /product="target of rapamycin complex subunit LST8 isoform
                     X3"
                     /calculated_mol_wt=35675
     Region          <10..319
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          46..82
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          88..126
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          130..166
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          173..216
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          223..257
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          272..298
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..325
                     /gene="MLST8"
                     /coded_by="XM_061152591.1:126..1103"
                     /db_xref="GeneID:133063342"
ORIGIN      
        1 mntspgtvgs dpvilatagy dhtvrfwqah sgictrtvqh qdsvnaleit pdrtmiaaag
       61 yqhirmydln snnpnpiisy dgvnkniasv gfhedgrwmy tggedctari wdlrsrnlqc
      121 qrifqvnapi ncvclhpnqa elivgdqsga ihiwdlktdh neqlipepev sitsahidpd
      181 asymaavnst gncyvwnltg gigdevtqli pktkipahtr yalqcrfspd stllatcsad
      241 qtckiwrtsn fslmtelsik ssnpgessrg wmwgcafsgd sqyivtassd nlarlwcvet
      301 geikreyggh qkavvclafn dsvlg
//
LOCUS       XP_061008576             321 aa            linear   MAM 02-DEC-2023
DEFINITION  glycerol-3-phosphate phosphatase [Dama dama].
ACCESSION   XP_061008576
VERSION     XP_061008576.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152593.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..321
                     /product="glycerol-3-phosphate phosphatase"
                     /calculated_mol_wt=34205
     Region          28..319
                     /region_name="HAD_Pase_UmpH-like"
                     /note="UmpH/NagD family phosphatase, similar to human PGP
                     phosphoglycolate phosphatase and Schizosaccharomyces pombe
                     PHO2 p-nitrophenylphosphatase; cd07510"
                     /db_xref="CDD:319813"
     Site            order(34..38,66..69,172,201,204,235,259..261,264..265)
                     /site_type="active"
                     /db_xref="CDD:319813"
     CDS             1..321
                     /gene="PGP"
                     /coded_by="XM_061152593.1:32..997"
                     /db_xref="GeneID:133063343"
ORIGIN      
        1 maeaeaggdd grcvrlnaer aqalladvdt llfdcdgvlw rgetavpgap etltalrarg
       61 krlgfitnns sktreayaek lrslgfggpt gpdacrevfg tayctalylr qrlvgppapk
      121 ayvlgsvala aeleavgisc vgvgpeplpg egpgawldap leadvravvv gfdphfsymk
      181 ltkavrylqq pdcllvgtnm dnrlplengr fiagtgclvr avemaaqrqa diigkpsrfi
      241 fdcvsqeygi hpertvmvgd rldtdillgv tcglktiltl tgvsslrdvk snqesdcmak
      301 kkmvpdfyvd siadllpalq g
//
LOCUS       XP_061008577             781 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor E4F1 isoform X1 [Dama dama].
ACCESSION   XP_061008577
VERSION     XP_061008577.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152594.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..781
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..781
                     /product="transcription factor E4F1 isoform X1"
                     /calculated_mol_wt=83146
     Region          182..592
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          193..213
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(198,200,202,204..205,208..209,212,226,228,232..233,
                     236..237,240,254,256,258,260..261,264..265)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          221..241
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(221,224,237,241)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          249..267
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          434..454
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(434,437,450,454)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          462..482
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          490..510
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(490,493,506,510)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          518..538
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(523,525,527,529..530,533..534,537,551,553,557..558,
                     561..562,565,579,581,583,585..586,589..590,593)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          546..566
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(546,549,562,566)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          574..593
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..781
                     /gene="E4F1"
                     /coded_by="XM_061152594.1:62..2407"
                     /db_xref="GeneID:133063344"
ORIGIN      
        1 megamavrvt aahtaearae agreageggv aaaaaalapg gflglpapfs eededdvhrc
       61 grcqaeftal edfvqhklqk acqrapqeal patpaaallg revaagaags eepitvahiv
      121 veaaalagdi shspdivggg hikevivase aepgdsevae gpgspsrrgp glsaegeqaq
      181 vkllvnkdgr yvcmlchktf ktgsilkahm vthssrkdhe cklcgasfrt kgslirhhrr
      241 htderpykca kcgksfresg altrhlkslt pctekirfsm skdmvvsked vpagssastv
      301 gavtpssvag epmetspvih lvtdakgtvi hevhvqmqel plgmkalape ppgpqelpcs
      361 seggrenllh qamqnsgivl erapgeegtl gpatptvssp qppgdaapel plleveqvet
      421 vageassvpr thpcpqcset fptaatleah krghagprpf tcpqcgkafp kayllkkhqe
      481 vhvherrfrc gdcgklykti ahvrghrrvh sderpypcpe cgkryktkna qqvhfrthle
      541 ekphvcpfcs rgfrekgslv rhvrhhtgek pfkcykcgrg faehgtlnrh lrtkggclle
      601 veellvsees paaaaavlte dphtvlvefs svvadtqeyi ieataddaet seateiiegt
      661 qtevdshimk vvqqivhqas aghqiivqnv tmdqearlgp eaaaadtiti atpeslteqv
      721 amtlasaise gtvltarsgt sgaeqatvtm vssedieile hagelviasp egqlevqtvi
      781 v
//
LOCUS       XP_061008578             778 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor E4F1 isoform X2 [Dama dama].
ACCESSION   XP_061008578
VERSION     XP_061008578.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152595.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..778
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..778
                     /product="transcription factor E4F1 isoform X2"
                     /calculated_mol_wt=82817
     Region          182..589
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          193..213
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(198,200,202,204..205,208..209,212,226,228,232..233,
                     236..237,240,254,256,258,260..261,264..265)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          221..241
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(221,224,237,241)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          249..267
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          431..451
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(431,434,447,451)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          459..479
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          487..507
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(487,490,503,507)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          515..535
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(520,522,524,526..527,530..531,534,548,550,554..555,
                     558..559,562,576,578,580,582..583,586..587,590)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          543..563
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(543,546,559,563)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          571..590
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..778
                     /gene="E4F1"
                     /coded_by="XM_061152595.1:62..2398"
                     /db_xref="GeneID:133063344"
ORIGIN      
        1 megamavrvt aahtaearae agreageggv aaaaaalapg gflglpapfs eededdvhrc
       61 grcqaeftal edfvqhklqk acqrapqeal patpaaallg revaagaags eepitvahiv
      121 veaaalagdi shspdivggg hikevivase aepgdsevae gpgspsrrgp glsaegeqaq
      181 vkllvnkdgr yvcmlchktf ktgsilkahm vthssrkdhe cklcgasfrt kgslirhhrr
      241 htderpykca kcgksfresg altrhlkslt pctekirfsm skdmvvsked vpagssastv
      301 gavtpssvag epmetspvih lvtdakgtvi hevhvqmqel plgmkalape ppgpqelpcs
      361 seggrenllh qamqnsgivl erapgeegtl gpatptvssp qppgdaapel plleveqvag
      421 eassvprthp cpqcsetfpt aatleahkrg hagprpftcp qcgkafpkay llkkhqevhv
      481 herrfrcgdc gklyktiahv rghrrvhsde rpypcpecgk ryktknaqqv hfrthleekp
      541 hvcpfcsrgf rekgslvrhv rhhtgekpfk cykcgrgfae hgtlnrhlrt kggcllevee
      601 llvseespaa aaavltedph tvlvefssvv adtqeyiiea taddaetsea teiiegtqte
      661 vdshimkvvq qivhqasagh qiivqnvtmd qearlgpeaa aadtitiatp eslteqvamt
      721 lasaisegtv ltarsgtsga eqatvtmvss edieilehag elviaspegq levqtviv
//
LOCUS       XP_061008579             750 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor E4F1 isoform X3 [Dama dama].
ACCESSION   XP_061008579
VERSION     XP_061008579.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152596.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..750
                     /product="transcription factor E4F1 isoform X3"
                     /calculated_mol_wt=79680
     Region          182..561
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          193..213
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          221..241
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(221,224,237,241)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          403..423
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(403,406,419,423)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          431..451
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          459..479
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(459,462,475,479)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          487..507
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(492,494,496,498..499,502..503,506,520,522,526..527,
                     530..531,534,548,550,552,554..555,558..559,562)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          515..535
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(515,518,531,535)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          543..562
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..750
                     /gene="E4F1"
                     /coded_by="XM_061152596.1:62..2314"
                     /db_xref="GeneID:133063344"
ORIGIN      
        1 megamavrvt aahtaearae agreageggv aaaaaalapg gflglpapfs eededdvhrc
       61 grcqaeftal edfvqhklqk acqrapqeal patpaaallg revaagaags eepitvahiv
      121 veaaalagdi shspdivggg hikevivase aepgdsevae gpgspsrrgp glsaegeqaq
      181 vkllvnkdgr yvcmlchktf ktgsilkahm vthssrkdhe cklcgasfrt kgslirhhrr
      241 htekirfsms kdmvvskedv pagssastvg avtpssvage pmetspvihl vtdakgtvih
      301 evhvqmqelp lgmkalapep pgpqelpcss eggrenllhq amqnsgivle rapgeegtlg
      361 patptvsspq ppgdaapelp lleveqvetv ageassvprt hpcpqcsetf ptaatleahk
      421 rghagprpft cpqcgkafpk ayllkkhqev hvherrfrcg dcgklyktia hvrghrrvhs
      481 derpypcpec gkryktknaq qvhfrthlee kphvcpfcsr gfrekgslvr hvrhhtgekp
      541 fkcykcgrgf aehgtlnrhl rtkggcllev eellvseesp aaaaavlted phtvlvefss
      601 vvadtqeyii eataddaets eateiiegtq tevdshimkv vqqivhqasa ghqiivqnvt
      661 mdqearlgpe aaaadtitia tpeslteqva mtlasaiseg tvltarsgts gaeqatvtmv
      721 ssedieileh agelviaspe gqlevqtviv
//
LOCUS       XP_061008580             303 aa            linear   MAM 02-DEC-2023
DEFINITION  enoyl-CoA delta isomerase 1, mitochondrial [Dama dama].
ACCESSION   XP_061008580
VERSION     XP_061008580.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152597.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..303
                     /product="enoyl-CoA delta isomerase 1, mitochondrial"
                     /calculated_mol_wt=33120
     Region          56..300
                     /region_name="ECH_1"
                     /note="Enoyl-CoA hydratase/isomerase; pfam00378"
                     /db_xref="CDD:395302"
     Site            order(68,70,103,107..111,150,152..154,178..179,182)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:119339"
     Site            order(109,154)
                     /site_type="active"
                     /note="oxyanion hole (OAH) forming residues [active]"
                     /db_xref="CDD:119339"
     Site            order(134,142,163..166,180..183,189,191..193,195..196,
                     201..202,204..205,207..208,211,222,225,240,243..244)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:119339"
     CDS             1..303
                     /gene="ECI1"
                     /coded_by="XM_061152597.1:55..966"
                     /db_xref="GeneID:133063345"
ORIGIN      
        1 malasgvrvp arallrpwal lwgttlgrre paaggggdge rrfgsqrvlv epdaaagvav
       61 mklrnppvns lslelltelv isleklendk tfrgviltsn cprvfsagld ltevcgrnpa
      121 hyteywkavq elwlrtylss lvlvaainga cpaggciial scdfrvladn pkyhiglnet
      181 llgivapfwl kdayvntigh raseqalqlg llfppaealq vglvdqvvpe dqvlgtalsa
      241 marwlavpdh arqltknmmr katadrllrq rdadiqnfvs ficrdsiqks lqvyleklrq
      301 rkg
//
LOCUS       XP_061008581             303 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: deoxyribonuclease-1-like 2 [Dama dama].
ACCESSION   XP_061008581
VERSION     XP_061008581.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152598.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..303
                     /product="LOW QUALITY PROTEIN: deoxyribonuclease-1-like 2"
                     /calculated_mol_wt=32759
     Region          23..301
                     /region_name="EEP"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; cl00490"
                     /db_xref="CDD:469791"
     Site            order(28..29,31,35,60,62..64,96..97,99,127,175,178,209,
                     211,216,248,252..253,292..293)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197337"
     Site            order(28,60,99,175,209,211,253,292..293)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197337"
     Site            order(28,60,292)
                     /site_type="other"
                     /note="putative Mg binding site IVb [ion binding]"
                     /db_xref="CDD:197337"
     Site            order(30,175,209,211,293)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197337"
     Site            30
                     /site_type="other"
                     /note="actin binding site [polypeptide binding]"
                     /db_xref="CDD:197337"
     Site            order(31,35,62..64,96..97,99,127,175,178,209,211,216,252,
                     293)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197337"
     Site            order(120,128)
                     /site_type="other"
                     /note="Ca binding site II [ion binding]"
                     /db_xref="CDD:197337"
     Site            order(209,253,293)
                     /site_type="other"
                     /note="putative Mg binding site IVa [ion binding]"
                     /db_xref="CDD:197337"
     Site            order(213,239)
                     /site_type="metal-binding"
                     /note="metal binding site III [ion binding]"
                     /db_xref="CDD:197337"
     Site            order(242,244)
                     /site_type="other"
                     /note="Ca binding site I [ion binding]"
                     /db_xref="CDD:197337"
     CDS             1..303
                     /gene="DNASE1L2"
                     /coded_by="XM_061152598.1:1..912"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /db_xref="GeneID:133063346"
ORIGIN      
        1 mggpltllaa lwalgaagaq alrigafniq sfgdskvsdt gccgviaqil agydvmlvqe
       61 vrdpdlsavs almeqinsvs rheysfvsse plgrdqykem ylfvyrkdtv svvdtyqypd
      121 tedafsrepf vvkfsvpgcg eaprpapasg papaagpxhp aplaaakelv liplhaaphh
      181 avaeidalyd vyldvidkwg tddilflgdf nadckyvraq dwpairlrss evfkwlipds
      241 adttvgnsdc aydrivvcgs rlrkslkhls atvhdfqeef gldqsqalti sdhfpvevtl
      301 ksh
//
LOCUS       XP_061008582             305 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA-binding protein with serine-rich domain 1 isoform X1 [Dama
            dama].
ACCESSION   XP_061008582
VERSION     XP_061008582.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152599.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..305
                     /product="RNA-binding protein with serine-rich domain 1
                     isoform X1"
                     /calculated_mol_wt=34049
     Region          163..236
                     /region_name="RRM_RNPS1"
                     /note="RNA recognition motif (RRM) found in RNA-binding
                     protein with serine-rich domain 1 (RNPS1) and similar
                     proteins; cd12365"
                     /db_xref="CDD:409800"
     Site            order(169..173,175..176,179..180,183..184,195,200..201,
                     221..231)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:409800"
     CDS             1..305
                     /gene="RNPS1"
                     /coded_by="XM_061152599.1:240..1157"
                     /db_xref="GeneID:133063347"
ORIGIN      
        1 mdlsgvkkks llgvkennkk sstrapsptk rkdrsdeksk drskdkgatk essekdrgrd
       61 ktrkrrsass gssstrsrss stsssgssts tgsssgssss sassrsgsss tsrsssssss
      121 sgspspsrrr hdnrrrsrsk skppkrdeke rkrrspspkp tkvhigrltr nvtkdhimei
      181 fstygkikmi dmpvermhph lskgyayvef enpdeaekal khmdggqidg qeitatavla
      241 pwprppprrf spprrmlppp pmwrrspprm rrrsrsprrr sparrrsrsp grrrhrsrss
      301 snssr
//
LOCUS       XP_061008583             305 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA-binding protein with serine-rich domain 1 isoform X1 [Dama
            dama].
ACCESSION   XP_061008583
VERSION     XP_061008583.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152600.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..305
                     /product="RNA-binding protein with serine-rich domain 1
                     isoform X1"
                     /calculated_mol_wt=34049
     Region          163..236
                     /region_name="RRM_RNPS1"
                     /note="RNA recognition motif (RRM) found in RNA-binding
                     protein with serine-rich domain 1 (RNPS1) and similar
                     proteins; cd12365"
                     /db_xref="CDD:409800"
     Site            order(169..173,175..176,179..180,183..184,195,200..201,
                     221..231)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:409800"
     CDS             1..305
                     /gene="RNPS1"
                     /coded_by="XM_061152600.1:257..1174"
                     /db_xref="GeneID:133063347"
ORIGIN      
        1 mdlsgvkkks llgvkennkk sstrapsptk rkdrsdeksk drskdkgatk essekdrgrd
       61 ktrkrrsass gssstrsrss stsssgssts tgsssgssss sassrsgsss tsrsssssss
      121 sgspspsrrr hdnrrrsrsk skppkrdeke rkrrspspkp tkvhigrltr nvtkdhimei
      181 fstygkikmi dmpvermhph lskgyayvef enpdeaekal khmdggqidg qeitatavla
      241 pwprppprrf spprrmlppp pmwrrspprm rrrsrsprrr sparrrsrsp grrrhrsrss
      301 snssr
//
LOCUS       XP_061008585             282 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA-binding protein with serine-rich domain 1 isoform X2 [Dama
            dama].
ACCESSION   XP_061008585
VERSION     XP_061008585.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152602.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..282
                     /product="RNA-binding protein with serine-rich domain 1
                     isoform X2"
                     /calculated_mol_wt=31550
     Region          140..213
                     /region_name="RRM_RNPS1"
                     /note="RNA recognition motif (RRM) found in RNA-binding
                     protein with serine-rich domain 1 (RNPS1) and similar
                     proteins; cd12365"
                     /db_xref="CDD:409800"
     Site            order(146..150,152..153,156..157,160..161,172,177..178,
                     198..208)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:409800"
     CDS             1..282
                     /gene="RNPS1"
                     /coded_by="XM_061152602.1:131..979"
                     /db_xref="GeneID:133063347"
ORIGIN      
        1 mapsptkrkd rsdekskdrs kdkgatkess ekdrgrdktr krrsassgss strsrsssts
       61 ssgsststgs ssgsssssas srsgssstsr ssssssssgs pspsrrrhdn rrrsrskskp
      121 pkrdekerkr rspspkptkv higrltrnvt kdhimeifst ygkikmidmp vermhphlsk
      181 gyayvefenp deaekalkhm dggqidgqei tatavlapwp rppprrfspp rrmlppppmw
      241 rrspprmrrr srsprrrspa rrrsrspgrr rhrsrsssns sr
//
LOCUS       XP_061008586            1704 aa            linear   MAM 02-DEC-2023
DEFINITION  phospholipid-transporting ATPase ABCA3 [Dama dama].
ACCESSION   XP_061008586
VERSION     XP_061008586.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152603.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1704
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1704
                     /product="phospholipid-transporting ATPase ABCA3"
                     /calculated_mol_wt=190879
     Region          <206..1701
                     /region_name="rim_protein"
                     /note="retinal-specific rim ABC transporter; TIGR01257"
                     /db_xref="CDD:130324"
     CDS             1..1704
                     /gene="ABCA3"
                     /coded_by="XM_061152603.1:569..5683"
                     /db_xref="GeneID:133063348"
ORIGIN      
        1 mavlrqlall lwknytlqkr kvlvtllelf lpllfsgili wlrlkiqsen vpnatlypsq
       61 sirelplffs fpppgatwel ayipsqseav rtvvenvqra lvinlrargf asekdfedyi
      121 rydnrsanvl aalvfehtfn hsrdplplav ryhlrfsytr rnymwtqtgs fflketegwh
      181 ttslfplfpn pgpreptspd ggepgyireg flavqhavdr aimhyhanas ahqlfekltv
      241 iakrfpyppf isdpflvaiq yqlplllmls ftytslsiir aivqekekkl keymrmmgls
      301 swllwtawfl lffllllvav sfmtllfcvk vkkdvavlah sdpalvlvfl acfaissisf
      361 sfmvstffsk anmaaaiggf lyffsyipyf fvaprynwmt lsqklfscll snvamamgaq
      421 ligkfeakgt giqwrdllsp vnvdddftfg qvlgmlllds ilyglvtwyv eavlpgqfgv
      481 pqpwyffilp sywcgrprta lgkeeedddp ekvlrteyfe aepedlvagi kikhvtkvfr
      541 vgnkgkaavr dlnlnlyegq itvllghnga gktttlsmlt glfpptsgra yisgyevsqd
      601 mdqirkslgl cpqhdvlfdn ltvaehlyfy aqlkglprqk cpeevkrmlh vlgleekrds
      661 rskflsggmr rklsigiali agskvlmlde ptsgvdaisr raiwdllqqh ksdrtilltt
      721 hfmdeadllg driaimakge lqccgsslfl kekygagyhm tlvkephcnp egisrlvqhh
      781 vpnatlessa gaelsfilpk esthrfeslf aklekkqkel giasfgasvt tmeevflrvg
      841 klvdtsmdiq aiqlpalqyq herrasdwav dghlcgtmdp tdgvgaliee ectavrlntg
      901 lalhcqqfwa mflkkatysw rewkvvaaqv lvpvtcltla llainyssei fddpllkltl
      961 geygrtvvpf svpgtsrldq qlsehlkdml qaegqeprev lgdleeflif rasvegggfn
     1021 erclvaasfr dtgehtvvta lfnnqayhsp atalavvdnl lfkllcgpra sitvsnfpqp
     1081 rsalqaakdq fnegrkgfdi alnllfamaf lastfsilav seravqakhv qfvsgvhvat
     1141 fwlsallwdl lsflvpslll lvvfkafdvh aftrdghvad alllltlygw aiiplmylms
     1201 fffsgaatay trltifnils giatflvvti mripavklee lsrtldrvfl vlpnhclgma
     1261 vsnfyqnyet rryctssdva ahycrkyniq yqenfyawst pgvgrfvtsm aasgfayltl
     1321 lflveadllw rlktclcafr rrraltevyt rtaalpedqd vmdernrvls psldslldtp
     1381 liikelskvy ehrvpllavd kvslavqkge cfgllgfnga gktttfkmlt geetitcgda
     1441 fvggysissd igkvrqrigy cpqfdalldh mtgretlvmf arlrgiperh igacventlr
     1501 glllephank lvrtysggnk rklstgiall gepaviflde pstgmdpvar rllwdtvara
     1561 resgkaiiit shsmeeceal ctrlaimvqg qfkclgspqh lkskfgsgys lrakirsdgq
     1621 qetleefkaf vgltfpgsvl edehqgmvhy hlpgddlswa kvfgvlekak ekygvddysv
     1681 sqtsleqvfl sfahlqpsaq dagp
//
LOCUS       XP_061008587            1704 aa            linear   MAM 02-DEC-2023
DEFINITION  phospholipid-transporting ATPase ABCA3 [Dama dama].
ACCESSION   XP_061008587
VERSION     XP_061008587.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152604.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1704
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1704
                     /product="phospholipid-transporting ATPase ABCA3"
                     /calculated_mol_wt=190879
     Region          <206..1701
                     /region_name="rim_protein"
                     /note="retinal-specific rim ABC transporter; TIGR01257"
                     /db_xref="CDD:130324"
     CDS             1..1704
                     /gene="ABCA3"
                     /coded_by="XM_061152604.1:456..5570"
                     /db_xref="GeneID:133063348"
ORIGIN      
        1 mavlrqlall lwknytlqkr kvlvtllelf lpllfsgili wlrlkiqsen vpnatlypsq
       61 sirelplffs fpppgatwel ayipsqseav rtvvenvqra lvinlrargf asekdfedyi
      121 rydnrsanvl aalvfehtfn hsrdplplav ryhlrfsytr rnymwtqtgs fflketegwh
      181 ttslfplfpn pgpreptspd ggepgyireg flavqhavdr aimhyhanas ahqlfekltv
      241 iakrfpyppf isdpflvaiq yqlplllmls ftytslsiir aivqekekkl keymrmmgls
      301 swllwtawfl lffllllvav sfmtllfcvk vkkdvavlah sdpalvlvfl acfaissisf
      361 sfmvstffsk anmaaaiggf lyffsyipyf fvaprynwmt lsqklfscll snvamamgaq
      421 ligkfeakgt giqwrdllsp vnvdddftfg qvlgmlllds ilyglvtwyv eavlpgqfgv
      481 pqpwyffilp sywcgrprta lgkeeedddp ekvlrteyfe aepedlvagi kikhvtkvfr
      541 vgnkgkaavr dlnlnlyegq itvllghnga gktttlsmlt glfpptsgra yisgyevsqd
      601 mdqirkslgl cpqhdvlfdn ltvaehlyfy aqlkglprqk cpeevkrmlh vlgleekrds
      661 rskflsggmr rklsigiali agskvlmlde ptsgvdaisr raiwdllqqh ksdrtilltt
      721 hfmdeadllg driaimakge lqccgsslfl kekygagyhm tlvkephcnp egisrlvqhh
      781 vpnatlessa gaelsfilpk esthrfeslf aklekkqkel giasfgasvt tmeevflrvg
      841 klvdtsmdiq aiqlpalqyq herrasdwav dghlcgtmdp tdgvgaliee ectavrlntg
      901 lalhcqqfwa mflkkatysw rewkvvaaqv lvpvtcltla llainyssei fddpllkltl
      961 geygrtvvpf svpgtsrldq qlsehlkdml qaegqeprev lgdleeflif rasvegggfn
     1021 erclvaasfr dtgehtvvta lfnnqayhsp atalavvdnl lfkllcgpra sitvsnfpqp
     1081 rsalqaakdq fnegrkgfdi alnllfamaf lastfsilav seravqakhv qfvsgvhvat
     1141 fwlsallwdl lsflvpslll lvvfkafdvh aftrdghvad alllltlygw aiiplmylms
     1201 fffsgaatay trltifnils giatflvvti mripavklee lsrtldrvfl vlpnhclgma
     1261 vsnfyqnyet rryctssdva ahycrkyniq yqenfyawst pgvgrfvtsm aasgfayltl
     1321 lflveadllw rlktclcafr rrraltevyt rtaalpedqd vmdernrvls psldslldtp
     1381 liikelskvy ehrvpllavd kvslavqkge cfgllgfnga gktttfkmlt geetitcgda
     1441 fvggysissd igkvrqrigy cpqfdalldh mtgretlvmf arlrgiperh igacventlr
     1501 glllephank lvrtysggnk rklstgiall gepaviflde pstgmdpvar rllwdtvara
     1561 resgkaiiit shsmeeceal ctrlaimvqg qfkclgspqh lkskfgsgys lrakirsdgq
     1621 qetleefkaf vgltfpgsvl edehqgmvhy hlpgddlswa kvfgvlekak ekygvddysv
     1681 sqtsleqvfl sfahlqpsaq dagp
//
LOCUS       XP_061008588            1704 aa            linear   MAM 02-DEC-2023
DEFINITION  phospholipid-transporting ATPase ABCA3 [Dama dama].
ACCESSION   XP_061008588
VERSION     XP_061008588.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152605.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1704
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1704
                     /product="phospholipid-transporting ATPase ABCA3"
                     /calculated_mol_wt=190879
     Region          <206..1701
                     /region_name="rim_protein"
                     /note="retinal-specific rim ABC transporter; TIGR01257"
                     /db_xref="CDD:130324"
     CDS             1..1704
                     /gene="ABCA3"
                     /coded_by="XM_061152605.1:833..5947"
                     /db_xref="GeneID:133063348"
ORIGIN      
        1 mavlrqlall lwknytlqkr kvlvtllelf lpllfsgili wlrlkiqsen vpnatlypsq
       61 sirelplffs fpppgatwel ayipsqseav rtvvenvqra lvinlrargf asekdfedyi
      121 rydnrsanvl aalvfehtfn hsrdplplav ryhlrfsytr rnymwtqtgs fflketegwh
      181 ttslfplfpn pgpreptspd ggepgyireg flavqhavdr aimhyhanas ahqlfekltv
      241 iakrfpyppf isdpflvaiq yqlplllmls ftytslsiir aivqekekkl keymrmmgls
      301 swllwtawfl lffllllvav sfmtllfcvk vkkdvavlah sdpalvlvfl acfaissisf
      361 sfmvstffsk anmaaaiggf lyffsyipyf fvaprynwmt lsqklfscll snvamamgaq
      421 ligkfeakgt giqwrdllsp vnvdddftfg qvlgmlllds ilyglvtwyv eavlpgqfgv
      481 pqpwyffilp sywcgrprta lgkeeedddp ekvlrteyfe aepedlvagi kikhvtkvfr
      541 vgnkgkaavr dlnlnlyegq itvllghnga gktttlsmlt glfpptsgra yisgyevsqd
      601 mdqirkslgl cpqhdvlfdn ltvaehlyfy aqlkglprqk cpeevkrmlh vlgleekrds
      661 rskflsggmr rklsigiali agskvlmlde ptsgvdaisr raiwdllqqh ksdrtilltt
      721 hfmdeadllg driaimakge lqccgsslfl kekygagyhm tlvkephcnp egisrlvqhh
      781 vpnatlessa gaelsfilpk esthrfeslf aklekkqkel giasfgasvt tmeevflrvg
      841 klvdtsmdiq aiqlpalqyq herrasdwav dghlcgtmdp tdgvgaliee ectavrlntg
      901 lalhcqqfwa mflkkatysw rewkvvaaqv lvpvtcltla llainyssei fddpllkltl
      961 geygrtvvpf svpgtsrldq qlsehlkdml qaegqeprev lgdleeflif rasvegggfn
     1021 erclvaasfr dtgehtvvta lfnnqayhsp atalavvdnl lfkllcgpra sitvsnfpqp
     1081 rsalqaakdq fnegrkgfdi alnllfamaf lastfsilav seravqakhv qfvsgvhvat
     1141 fwlsallwdl lsflvpslll lvvfkafdvh aftrdghvad alllltlygw aiiplmylms
     1201 fffsgaatay trltifnils giatflvvti mripavklee lsrtldrvfl vlpnhclgma
     1261 vsnfyqnyet rryctssdva ahycrkyniq yqenfyawst pgvgrfvtsm aasgfayltl
     1321 lflveadllw rlktclcafr rrraltevyt rtaalpedqd vmdernrvls psldslldtp
     1381 liikelskvy ehrvpllavd kvslavqkge cfgllgfnga gktttfkmlt geetitcgda
     1441 fvggysissd igkvrqrigy cpqfdalldh mtgretlvmf arlrgiperh igacventlr
     1501 glllephank lvrtysggnk rklstgiall gepaviflde pstgmdpvar rllwdtvara
     1561 resgkaiiit shsmeeceal ctrlaimvqg qfkclgspqh lkskfgsgys lrakirsdgq
     1621 qetleefkaf vgltfpgsvl edehqgmvhy hlpgddlswa kvfgvlekak ekygvddysv
     1681 sqtsleqvfl sfahlqpsaq dagp
//
LOCUS       XP_061008589            1704 aa            linear   MAM 02-DEC-2023
DEFINITION  phospholipid-transporting ATPase ABCA3 [Dama dama].
ACCESSION   XP_061008589
VERSION     XP_061008589.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152606.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1704
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1704
                     /product="phospholipid-transporting ATPase ABCA3"
                     /calculated_mol_wt=190879
     Region          <206..1701
                     /region_name="rim_protein"
                     /note="retinal-specific rim ABC transporter; TIGR01257"
                     /db_xref="CDD:130324"
     CDS             1..1704
                     /gene="ABCA3"
                     /coded_by="XM_061152606.1:566..5680"
                     /db_xref="GeneID:133063348"
ORIGIN      
        1 mavlrqlall lwknytlqkr kvlvtllelf lpllfsgili wlrlkiqsen vpnatlypsq
       61 sirelplffs fpppgatwel ayipsqseav rtvvenvqra lvinlrargf asekdfedyi
      121 rydnrsanvl aalvfehtfn hsrdplplav ryhlrfsytr rnymwtqtgs fflketegwh
      181 ttslfplfpn pgpreptspd ggepgyireg flavqhavdr aimhyhanas ahqlfekltv
      241 iakrfpyppf isdpflvaiq yqlplllmls ftytslsiir aivqekekkl keymrmmgls
      301 swllwtawfl lffllllvav sfmtllfcvk vkkdvavlah sdpalvlvfl acfaissisf
      361 sfmvstffsk anmaaaiggf lyffsyipyf fvaprynwmt lsqklfscll snvamamgaq
      421 ligkfeakgt giqwrdllsp vnvdddftfg qvlgmlllds ilyglvtwyv eavlpgqfgv
      481 pqpwyffilp sywcgrprta lgkeeedddp ekvlrteyfe aepedlvagi kikhvtkvfr
      541 vgnkgkaavr dlnlnlyegq itvllghnga gktttlsmlt glfpptsgra yisgyevsqd
      601 mdqirkslgl cpqhdvlfdn ltvaehlyfy aqlkglprqk cpeevkrmlh vlgleekrds
      661 rskflsggmr rklsigiali agskvlmlde ptsgvdaisr raiwdllqqh ksdrtilltt
      721 hfmdeadllg driaimakge lqccgsslfl kekygagyhm tlvkephcnp egisrlvqhh
      781 vpnatlessa gaelsfilpk esthrfeslf aklekkqkel giasfgasvt tmeevflrvg
      841 klvdtsmdiq aiqlpalqyq herrasdwav dghlcgtmdp tdgvgaliee ectavrlntg
      901 lalhcqqfwa mflkkatysw rewkvvaaqv lvpvtcltla llainyssei fddpllkltl
      961 geygrtvvpf svpgtsrldq qlsehlkdml qaegqeprev lgdleeflif rasvegggfn
     1021 erclvaasfr dtgehtvvta lfnnqayhsp atalavvdnl lfkllcgpra sitvsnfpqp
     1081 rsalqaakdq fnegrkgfdi alnllfamaf lastfsilav seravqakhv qfvsgvhvat
     1141 fwlsallwdl lsflvpslll lvvfkafdvh aftrdghvad alllltlygw aiiplmylms
     1201 fffsgaatay trltifnils giatflvvti mripavklee lsrtldrvfl vlpnhclgma
     1261 vsnfyqnyet rryctssdva ahycrkyniq yqenfyawst pgvgrfvtsm aasgfayltl
     1321 lflveadllw rlktclcafr rrraltevyt rtaalpedqd vmdernrvls psldslldtp
     1381 liikelskvy ehrvpllavd kvslavqkge cfgllgfnga gktttfkmlt geetitcgda
     1441 fvggysissd igkvrqrigy cpqfdalldh mtgretlvmf arlrgiperh igacventlr
     1501 glllephank lvrtysggnk rklstgiall gepaviflde pstgmdpvar rllwdtvara
     1561 resgkaiiit shsmeeceal ctrlaimvqg qfkclgspqh lkskfgsgys lrakirsdgq
     1621 qetleefkaf vgltfpgsvl edehqgmvhy hlpgddlswa kvfgvlekak ekygvddysv
     1681 sqtsleqvfl sfahlqpsaq dagp
//
LOCUS       XP_061008590             143 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA polymerase epsilon subunit 3-like [Dama dama].
ACCESSION   XP_061008590
VERSION     XP_061008590.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152607.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..143
                     /product="DNA polymerase epsilon subunit 3-like"
                     /calculated_mol_wt=16150
     Region          6..92
                     /region_name="HFD_POLE3_DPB4"
                     /note="histone-fold domain found in DNA polymerase epsilon
                     subunit 3 (POLE3) and similar proteins; cd22928"
                     /db_xref="CDD:467053"
     Site            order(6..7,39,43,46..47,50..51,66..67,75,80,86..87,90)
                     /site_type="other"
                     /note="catalytic subunit binding site [polypeptide
                     binding]"
                     /db_xref="CDD:467053"
     Site            order(14,18..19,21,29..30,32..33,36..37,39..41,43..49,
                     62..66,69,76..78,81,84..85,88..89,91..92)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:467053"
     CDS             1..143
                     /gene="LOC133063349"
                     /coded_by="XM_061152607.1:1..432"
                     /db_xref="GeneID:133063349"
ORIGIN      
        1 maerpedlnl pnavitriik ealldgvnss keaqsaisra asvfvlyats cannfvmkgk
       61 cktlnasdvl stmeemefqr fvtplkeale ayrreqkgkk easeqkkkdk dkktdseeqd
      121 ksrdedegrl eeeeqneeee vdn
//
LOCUS       XP_061008591             787 aa            linear   MAM 02-DEC-2023
DEFINITION  cyclin-F [Dama dama].
ACCESSION   XP_061008591
VERSION     XP_061008591.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152608.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..787
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..787
                     /product="cyclin-F"
                     /calculated_mol_wt=87385
     Region          31..82
                     /region_name="F-box_FBXO1"
                     /note="F-box domain found in F-box only protein 1 (FBXO1)
                     and similar proteins; cd22082"
                     /db_xref="CDD:438854"
     Site            order(35,39,42..43,46..47,51,53..54,58..60,62)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438854"
     Region          <88..138
                     /region_name="TPR"
                     /note="TPR repeat [General function prediction only];
                     COG0790"
                     /db_xref="CDD:440553"
     Region          88..112
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     Region          307..401
                     /region_name="CYCLIN_CCNF_rpt1"
                     /note="first cyclin box found in G2/mitotic-specific
                     cyclin-F (CCNF) and similar proteins; cd20521"
                     /db_xref="CDD:410225"
     Region          429..540
                     /region_name="CYCLIN_SF"
                     /note="Cyclin box fold superfamily; cl40454"
                     /db_xref="CDD:477360"
     CDS             1..787
                     /gene="CCNF"
                     /coded_by="XM_061152608.1:76..2439"
                     /db_xref="GeneID:133063350"
ORIGIN      
        1 mgsggvihcr cakcfcypsk rrirrrprnl tilnlpedal fhilkwlsvg dilavravhs
       61 hlkylvdnha svwacasfqe lwpspgnlkl feraaekgnf eaavklgiay lyneglsvsd
      121 earaevnglk asryfslaer lnvgaapfiw lfirppwsvs gscckavvhe slraecqlqk
      181 thrasilhcl grvlslfede ekqkqarnlf eesanqgclt ssyllwesdr rmdmldpgrc
      241 lhsfrklrdf aakgcweaql slakacahgh qlgleakass eivcqlfqas havnkqrvfs
      301 vqkglndtmr yilidwlvev atmkdfsslc lhltvecvdr ylrrrlvpry rlqllgiacm
      361 victrfiske iltireavwl tdntykyedl vrmmgeiisa ldgkirvptv vdykdvlltl
      421 vpmaprtqhl cgflcelsll htslaayapa hlaaaallla rlthgqtqpw ttqlwdltgf
      481 scedlipcvl slhqkcfhdd apkdyrqvsl tavkqrfedk ryeeisleev lsygqlcaal
      541 gvkqespepa pflsagdiha flsspsgrra krkrenslqe drgsfvttpt aelssqeetl
      601 lgsfldwsld ycsgyegdqe segekegdvt apsgvldvtv vylspeehcc qessdeeacp
      661 eeawgaqdtq alapscqalr tpgpepplcg rrglgkdvtt sgyssvssas ptdsghasgg
      721 apqstselpt gsslntqpch hhtrksclqc rppsppesca pqqqvkrknl sapseeeedm
      781 nlgflkl
//
LOCUS       XP_061008592             433 aa            linear   MAM 02-DEC-2023
DEFINITION  tubulin epsilon and delta complex protein 2 [Dama dama].
ACCESSION   XP_061008592
VERSION     XP_061008592.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152609.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..433
                     /product="tubulin epsilon and delta complex protein 2"
                     /calculated_mol_wt=46948
     Region          146..426
                     /region_name="DUF4693"
                     /note="Domain of unknown function (DUF4693); pfam15764"
                     /db_xref="CDD:464854"
     CDS             1..433
                     /gene="TEDC2"
                     /coded_by="XM_061152609.1:106..1407"
                     /db_xref="GeneID:133063351"
ORIGIN      
        1 mlpaecsrrl vaelrdalds caerqrqleq slrvsrrllr awepaetpap eptpgpeine
       61 eapssacpps pqdlkelell tqalekavrv rkslsktgkg vkahslkfgs tspatrasap
      121 hstshcagsc apetkppggv rhpwvpakdl pgrrlllvgd gahmgkgaga nkpeaglrdq
      181 qiipqaapqv peaftlkdkg allrlpeafr katsrnarlw aqlsamqtgd svdvaaatak
      241 tqflqkmqta agqpgsrlsl aevgrlqkac sllrlrmree ltadpkdwmq eyrslltleg
      301 lqalaeqclh glqelrsavv eqprgpwpeg ppraaspcgg gtdpmwspql llyssteelq
      361 tlaalrlrva mldqqvhlek vlmaellpll seqeplgrpw lalcraahcl lceggqrflt
      421 vlrdepadrl spp
//
LOCUS       XP_061008594             563 aa            linear   MAM 02-DEC-2023
DEFINITION  TBC1 domain family member 24 [Dama dama].
ACCESSION   XP_061008594
VERSION     XP_061008594.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152611.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..563
                     /product="TBC1 domain family member 24"
                     /calculated_mol_wt=63169
     Region          49..253
                     /region_name="RabGAP-TBC"
                     /note="Rab-GTPase-TBC domain; pfam00566"
                     /db_xref="CDD:459855"
     Region          336..558
                     /region_name="TLDc"
                     /note="domain in TBC and LysM domain containing proteins;
                     smart00584"
                     /db_xref="CDD:214733"
     CDS             1..563
                     /gene="TBC1D24"
                     /coded_by="XM_061152611.1:289..1980"
                     /db_xref="GeneID:133063353"
ORIGIN      
        1 mnppayscfv drdkmdsaip dlgpkelscm elpelkqlar qgywarsyal rgqvyqrlir
       61 dipcrtvtpd asvyrdivgk ivgkhssasl plpefvdntq vpsyclnskg egavrkillc
      121 isnqfpdvsf cpalpavval llhysadeae cfekacrila ckdpsrklvd qsflafessc
      181 mtfgdlvnky cqaahqlmva vsedvlqvya dwqrwlfgel plsyfarvfd vflvegykvl
      241 yrvalailkf fhkaragqpl esdsvkqdir tfvrdiaktv spekllekaf airlfsrkei
      301 qllqmaneka lkqkgitvkq krqfvhlavh adnfhseivg vkemrdiwsw vperfalcqp
      361 lllfsslqhg ysltrfyfqc egreptvlli kttqkevcga ylstdwsern kfggklgffg
      421 tgecfvfrlq pevqryewvv ikhpeltkpa slestslest slesatvsss pshslssess
      481 drlspflatr hfnlpsktes lfmaggsdcl iigggggqal yidgdlnrgr tghcdtfnnq
      541 plcsenflia aveawgfqdp diq
//
LOCUS       XP_061008595             563 aa            linear   MAM 02-DEC-2023
DEFINITION  TBC1 domain family member 24 [Dama dama].
ACCESSION   XP_061008595
VERSION     XP_061008595.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152612.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..563
                     /product="TBC1 domain family member 24"
                     /calculated_mol_wt=63169
     Region          49..253
                     /region_name="RabGAP-TBC"
                     /note="Rab-GTPase-TBC domain; pfam00566"
                     /db_xref="CDD:459855"
     Region          336..558
                     /region_name="TLDc"
                     /note="domain in TBC and LysM domain containing proteins;
                     smart00584"
                     /db_xref="CDD:214733"
     CDS             1..563
                     /gene="TBC1D24"
                     /coded_by="XM_061152612.1:299..1990"
                     /db_xref="GeneID:133063353"
ORIGIN      
        1 mnppayscfv drdkmdsaip dlgpkelscm elpelkqlar qgywarsyal rgqvyqrlir
       61 dipcrtvtpd asvyrdivgk ivgkhssasl plpefvdntq vpsyclnskg egavrkillc
      121 isnqfpdvsf cpalpavval llhysadeae cfekacrila ckdpsrklvd qsflafessc
      181 mtfgdlvnky cqaahqlmva vsedvlqvya dwqrwlfgel plsyfarvfd vflvegykvl
      241 yrvalailkf fhkaragqpl esdsvkqdir tfvrdiaktv spekllekaf airlfsrkei
      301 qllqmaneka lkqkgitvkq krqfvhlavh adnfhseivg vkemrdiwsw vperfalcqp
      361 lllfsslqhg ysltrfyfqc egreptvlli kttqkevcga ylstdwsern kfggklgffg
      421 tgecfvfrlq pevqryewvv ikhpeltkpa slestslest slesatvsss pshslssess
      481 drlspflatr hfnlpsktes lfmaggsdcl iigggggqal yidgdlnrgr tghcdtfnnq
      541 plcsenflia aveawgfqdp diq
//
LOCUS       XP_061008596             563 aa            linear   MAM 02-DEC-2023
DEFINITION  TBC1 domain family member 24 [Dama dama].
ACCESSION   XP_061008596
VERSION     XP_061008596.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152613.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..563
                     /product="TBC1 domain family member 24"
                     /calculated_mol_wt=63169
     Region          49..253
                     /region_name="RabGAP-TBC"
                     /note="Rab-GTPase-TBC domain; pfam00566"
                     /db_xref="CDD:459855"
     Region          336..558
                     /region_name="TLDc"
                     /note="domain in TBC and LysM domain containing proteins;
                     smart00584"
                     /db_xref="CDD:214733"
     CDS             1..563
                     /gene="TBC1D24"
                     /coded_by="XM_061152613.1:635..2326"
                     /db_xref="GeneID:133063353"
ORIGIN      
        1 mnppayscfv drdkmdsaip dlgpkelscm elpelkqlar qgywarsyal rgqvyqrlir
       61 dipcrtvtpd asvyrdivgk ivgkhssasl plpefvdntq vpsyclnskg egavrkillc
      121 isnqfpdvsf cpalpavval llhysadeae cfekacrila ckdpsrklvd qsflafessc
      181 mtfgdlvnky cqaahqlmva vsedvlqvya dwqrwlfgel plsyfarvfd vflvegykvl
      241 yrvalailkf fhkaragqpl esdsvkqdir tfvrdiaktv spekllekaf airlfsrkei
      301 qllqmaneka lkqkgitvkq krqfvhlavh adnfhseivg vkemrdiwsw vperfalcqp
      361 lllfsslqhg ysltrfyfqc egreptvlli kttqkevcga ylstdwsern kfggklgffg
      421 tgecfvfrlq pevqryewvv ikhpeltkpa slestslest slesatvsss pshslssess
      481 drlspflatr hfnlpsktes lfmaggsdcl iigggggqal yidgdlnrgr tghcdtfnnq
      541 plcsenflia aveawgfqdp diq
//
LOCUS       XP_061008597             563 aa            linear   MAM 02-DEC-2023
DEFINITION  TBC1 domain family member 24 [Dama dama].
ACCESSION   XP_061008597
VERSION     XP_061008597.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152614.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..563
                     /product="TBC1 domain family member 24"
                     /calculated_mol_wt=63169
     Region          49..253
                     /region_name="RabGAP-TBC"
                     /note="Rab-GTPase-TBC domain; pfam00566"
                     /db_xref="CDD:459855"
     Region          336..558
                     /region_name="TLDc"
                     /note="domain in TBC and LysM domain containing proteins;
                     smart00584"
                     /db_xref="CDD:214733"
     CDS             1..563
                     /gene="TBC1D24"
                     /coded_by="XM_061152614.1:744..2435"
                     /db_xref="GeneID:133063353"
ORIGIN      
        1 mnppayscfv drdkmdsaip dlgpkelscm elpelkqlar qgywarsyal rgqvyqrlir
       61 dipcrtvtpd asvyrdivgk ivgkhssasl plpefvdntq vpsyclnskg egavrkillc
      121 isnqfpdvsf cpalpavval llhysadeae cfekacrila ckdpsrklvd qsflafessc
      181 mtfgdlvnky cqaahqlmva vsedvlqvya dwqrwlfgel plsyfarvfd vflvegykvl
      241 yrvalailkf fhkaragqpl esdsvkqdir tfvrdiaktv spekllekaf airlfsrkei
      301 qllqmaneka lkqkgitvkq krqfvhlavh adnfhseivg vkemrdiwsw vperfalcqp
      361 lllfsslqhg ysltrfyfqc egreptvlli kttqkevcga ylstdwsern kfggklgffg
      421 tgecfvfrlq pevqryewvv ikhpeltkpa slestslest slesatvsss pshslssess
      481 drlspflatr hfnlpsktes lfmaggsdcl iigggggqal yidgdlnrgr tghcdtfnnq
      541 plcsenflia aveawgfqdp diq
//
LOCUS       XP_061008598             563 aa            linear   MAM 02-DEC-2023
DEFINITION  TBC1 domain family member 24 [Dama dama].
ACCESSION   XP_061008598
VERSION     XP_061008598.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152615.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..563
                     /product="TBC1 domain family member 24"
                     /calculated_mol_wt=63169
     Region          49..253
                     /region_name="RabGAP-TBC"
                     /note="Rab-GTPase-TBC domain; pfam00566"
                     /db_xref="CDD:459855"
     Region          336..558
                     /region_name="TLDc"
                     /note="domain in TBC and LysM domain containing proteins;
                     smart00584"
                     /db_xref="CDD:214733"
     CDS             1..563
                     /gene="TBC1D24"
                     /coded_by="XM_061152615.1:330..2021"
                     /db_xref="GeneID:133063353"
ORIGIN      
        1 mnppayscfv drdkmdsaip dlgpkelscm elpelkqlar qgywarsyal rgqvyqrlir
       61 dipcrtvtpd asvyrdivgk ivgkhssasl plpefvdntq vpsyclnskg egavrkillc
      121 isnqfpdvsf cpalpavval llhysadeae cfekacrila ckdpsrklvd qsflafessc
      181 mtfgdlvnky cqaahqlmva vsedvlqvya dwqrwlfgel plsyfarvfd vflvegykvl
      241 yrvalailkf fhkaragqpl esdsvkqdir tfvrdiaktv spekllekaf airlfsrkei
      301 qllqmaneka lkqkgitvkq krqfvhlavh adnfhseivg vkemrdiwsw vperfalcqp
      361 lllfsslqhg ysltrfyfqc egreptvlli kttqkevcga ylstdwsern kfggklgffg
      421 tgecfvfrlq pevqryewvv ikhpeltkpa slestslest slesatvsss pshslssess
      481 drlspflatr hfnlpsktes lfmaggsdcl iigggggqal yidgdlnrgr tghcdtfnnq
      541 plcsenflia aveawgfqdp diq
//
LOCUS       XP_061008599             563 aa            linear   MAM 02-DEC-2023
DEFINITION  TBC1 domain family member 24 [Dama dama].
ACCESSION   XP_061008599
VERSION     XP_061008599.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152616.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..563
                     /product="TBC1 domain family member 24"
                     /calculated_mol_wt=63169
     Region          49..253
                     /region_name="RabGAP-TBC"
                     /note="Rab-GTPase-TBC domain; pfam00566"
                     /db_xref="CDD:459855"
     Region          336..558
                     /region_name="TLDc"
                     /note="domain in TBC and LysM domain containing proteins;
                     smart00584"
                     /db_xref="CDD:214733"
     CDS             1..563
                     /gene="TBC1D24"
                     /coded_by="XM_061152616.1:397..2088"
                     /db_xref="GeneID:133063353"
ORIGIN      
        1 mnppayscfv drdkmdsaip dlgpkelscm elpelkqlar qgywarsyal rgqvyqrlir
       61 dipcrtvtpd asvyrdivgk ivgkhssasl plpefvdntq vpsyclnskg egavrkillc
      121 isnqfpdvsf cpalpavval llhysadeae cfekacrila ckdpsrklvd qsflafessc
      181 mtfgdlvnky cqaahqlmva vsedvlqvya dwqrwlfgel plsyfarvfd vflvegykvl
      241 yrvalailkf fhkaragqpl esdsvkqdir tfvrdiaktv spekllekaf airlfsrkei
      301 qllqmaneka lkqkgitvkq krqfvhlavh adnfhseivg vkemrdiwsw vperfalcqp
      361 lllfsslqhg ysltrfyfqc egreptvlli kttqkevcga ylstdwsern kfggklgffg
      421 tgecfvfrlq pevqryewvv ikhpeltkpa slestslest slesatvsss pshslssess
      481 drlspflatr hfnlpsktes lfmaggsdcl iigggggqal yidgdlnrgr tghcdtfnnq
      541 plcsenflia aveawgfqdp diq
//
LOCUS       XP_061008600             155 aa            linear   MAM 02-DEC-2023
DEFINITION  V-type proton ATPase 16 kDa proteolipid subunit c [Dama dama].
ACCESSION   XP_061008600
VERSION     XP_061008600.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152617.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..155
                     /product="V-type proton ATPase 16 kDa proteolipid subunit
                     c"
                     /calculated_mol_wt=15562
     Region          13..118
                     /region_name="V_ATP_synt_C"
                     /note="vacuolar ATP synthase 16 kDa proteolipid subunit;
                     TIGR01100"
                     /db_xref="CDD:130170"
     Region          86..153
                     /region_name="ATP-synt_Vo_c_ATP6C_rpt2"
                     /note="V-type proton ATPase 16 kDa proteolipid subunit
                     (ATP6C/ATP6V0C/ATP6L/ATPL) and similar proteins; cd18176"
                     /db_xref="CDD:349416"
     CDS             1..155
                     /gene="ATP6V0C"
                     /coded_by="XM_061152617.1:163..630"
                     /db_xref="GeneID:133063354"
ORIGIN      
        1 mseaksgpey asffavmgas aamvfsalga aygtaksgtg iaamsvmrpe mimksiipvv
       61 magiiaiygl vvavliansl ndgislyrsf lqlgaglsvg lsglaagfai givgdagvrg
      121 taqqprlfvg mililifaev lglyglival ilstk
//
LOCUS       XP_061008602             409 aa            linear   MAM 02-DEC-2023
DEFINITION  N-acetylglucosamine-6-phosphate deacetylase isoform X1 [Dama dama].
ACCESSION   XP_061008602
VERSION     XP_061008602.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152619.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..409
                     /product="N-acetylglucosamine-6-phosphate deacetylase
                     isoform X1"
                     /calculated_mol_wt=43424
     Region          13..398
                     /region_name="NagA"
                     /note="N-acetylglucosamine-6-phosphate deacetylase, NagA,
                     catalyzes the hydrolysis of the N-acetyl group of
                     N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to
                     glucosamine 6-phosphate and acetate. This is the first
                     committed step in the biosynthetic pathway to...; cd00854"
                     /db_xref="CDD:238434"
     Site            order(71,73,143,154,211,232,235..236,272,294,328)
                     /site_type="active"
                     /db_xref="CDD:238434"
     Site            order(234,240,242..243,245,252..253,271..274,276..277,
                     279..280,283)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238434"
     CDS             1..409
                     /gene="AMDHD2"
                     /coded_by="XM_061152619.1:53..1282"
                     /db_xref="GeneID:133063355"
ORIGIN      
        1 mrggqgaara pviqftncri lrggallred lwvrggrild peklffeerr vadqqrdcgg
       61 cilapgfidv qinggfgvdf sqasedvgsg ialvarrils hgvtsfcptl vtsplevyhk
      121 vlpqipvksg gphgagvlgv hlegpfisre krgahpeahl rsfeadafqd vlatyggldn
      181 vrivtlapel dhsheviral talgicvslg hsvadlgtae kavqsgatfi thlfnamlpf
      241 hhrdpgivgl ltsdrlpagr rifygmiadg ihtnpaalri ahrahpkglv lvtdavpalg
      301 lgngrhtlgq qevevdglta yvagtstlsg siapmdtcvr hflqatgcsv ecaleaaslh
      361 paqllglekr kgtldfgada dfvvlddslh vratyisgel vwqaeearp
//
LOCUS       XP_061008603             387 aa            linear   MAM 02-DEC-2023
DEFINITION  N-acetylglucosamine-6-phosphate deacetylase isoform X2 [Dama dama].
ACCESSION   XP_061008603
VERSION     XP_061008603.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152620.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..387
                     /product="N-acetylglucosamine-6-phosphate deacetylase
                     isoform X2"
                     /calculated_mol_wt=41097
     Region          13..347
                     /region_name="NagA"
                     /note="N-acetylglucosamine-6-phosphate deacetylase, NagA,
                     catalyzes the hydrolysis of the N-acetyl group of
                     N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to
                     glucosamine 6-phosphate and acetate. This is the first
                     committed step in the biosynthetic pathway to...; cd00854"
                     /db_xref="CDD:238434"
     Site            order(71,73,143,154,211,232,235..236,272,294,328)
                     /site_type="active"
                     /db_xref="CDD:238434"
     Site            order(234,240,242..243,245,252..253,271..274,276..277,
                     279..280,283)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238434"
     CDS             1..387
                     /gene="AMDHD2"
                     /coded_by="XM_061152620.1:53..1216"
                     /db_xref="GeneID:133063355"
ORIGIN      
        1 mrggqgaara pviqftncri lrggallred lwvrggrild peklffeerr vadqqrdcgg
       61 cilapgfidv qinggfgvdf sqasedvgsg ialvarrils hgvtsfcptl vtsplevyhk
      121 vlpqipvksg gphgagvlgv hlegpfisre krgahpeahl rsfeadafqd vlatyggldn
      181 vrivtlapel dhsheviral talgicvslg hsvadlgtae kavqsgatfi thlfnamlpf
      241 hhrdpgivgl ltsdrlpagr rifygmiadg ihtnpaalri ahrahpkglv lvtdavpalg
      301 lgngrhtlgq qevevdglta yvagtstlsg siapmdtcvr hflqatgmwp gsrlqevrse
      361 gesganqqga gtqsdwpwsh stqgwgl
//
LOCUS       XP_061008604             557 aa            linear   MAM 02-DEC-2023
DEFINITION  3-phosphoinositide-dependent protein kinase 1 [Dama dama].
ACCESSION   XP_061008604
VERSION     XP_061008604.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152621.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..557
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..557
                     /product="3-phosphoinositide-dependent protein kinase 1"
                     /calculated_mol_wt=63095
     Region          81..343
                     /region_name="STKc_PDK1"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Phosphoinositide-dependent kinase 1; cd05581"
                     /db_xref="CDD:270733"
     Site            order(89..93,97,110,112,144,160..161,163,167,169,206,208,
                     210..211,213,223..224,227,243..248,275,281,284)
                     /site_type="active"
                     /db_xref="CDD:270733"
     Site            order(89..92,95,97,110,112,131,144,160..163,166..167,
                     210..211,213,223..224)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270733"
     Site            order(93,167,169,206,208,210,227,243..248,275,281,284)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270733"
     Site            order(223..233,240..248)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270733"
     Region          442..548
                     /region_name="PH_PDK1"
                     /note="3-Phosphoinositide dependent protein kinase 1
                     (PDK1) pleckstrin homology (PH) domain; cd01262"
                     /db_xref="CDD:241293"
     Site            order(466,468,473,475,487,496,522)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:241293"
     CDS             1..557
                     /gene="PDPK1"
                     /coded_by="XM_061152621.1:110..1783"
                     /db_xref="GeneID:133063356"
ORIGIN      
        1 marttsqlyd tvpiqssvvl cscpspsmvr tqtesstapg vpsggsrqgp amdgtaaqpr
       61 asasalqhaa qppqprkkrp edfkfgkilg egsfstvvla relatsreya ikilekrhii
      121 kenkvpyvtr erdvmsrldh pffvklyftf qddeklyfgl syakngellk yirkigsfde
      181 tctrfytaem vsaleylhgk gvihrdlkpe nillnedmhi qitdfgtakv lspeskqara
      241 nsfvgtaqyv spellteksa ckssdlwalg ciiyqlvagl ppfragneyl ifqkiikley
      301 dfpekffpka rdlvekllvl datkrlgcee megygplkah pffesitwed lhqqtppklt
      361 aylpamsedd edcygnydnl lsqfgcmqvs asssshslsa vdagppqrag snieqyihdl
      421 dtnsfeldlq fsedekrlll ekqasgnpwh qfvennlilk mgpvdkrkgl farrrqlllt
      481 egphlyyvdp vnkvlkgeip wsqelrpeak nfktffvhtp nrtyylmdps gnahkwcrki
      541 qevwrhryqs hpdaavq
//
LOCUS       XP_061008605             239 aa            linear   MAM 02-DEC-2023
DEFINITION  BTB/POZ domain-containing protein KCTD5 isoform X1 [Dama dama].
ACCESSION   XP_061008605
VERSION     XP_061008605.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152622.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..239
                     /product="BTB/POZ domain-containing protein KCTD5 isoform
                     X1"
                     /calculated_mol_wt=26163
     Region          40..151
                     /region_name="BTB_POZ_KCTD5"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in potassium
                     channel tetramerization domain-containing protein 5
                     (KCTD5); cd18390"
                     /db_xref="CDD:349698"
     Site            order(43,45,49,51..52,55..58,61,83,91..95,98,104,107..108,
                     110,112..119,121,124)
                     /site_type="other"
                     /note="pentamer interface [polypeptide binding]"
                     /db_xref="CDD:349698"
     CDS             1..239
                     /gene="KCTD5"
                     /coded_by="XM_061152622.1:26..745"
                     /db_xref="GeneID:133063357"
ORIGIN      
        1 maenhcellp papgglgagl ggglcrrcsa glgalaqrpg svskwvrlnv ggtyflttrq
       61 tlcrdpksfl yrlcqadpdl dsdkdetgay lidrdptyfg pvlnylrhgk lvinkdlaee
      121 gvleeaefyn itsliklvkd kirerdskts qvpvkhvyrv lqcqeeeltq mvstmsdgwk
      181 feqlvsigss ynygsedqae flcvvskelh nsphgpasep sekaksdded tgpgdsdsd
//
LOCUS       XP_061008606             234 aa            linear   MAM 02-DEC-2023
DEFINITION  BTB/POZ domain-containing protein KCTD5 isoform X2 [Dama dama].
ACCESSION   XP_061008606
VERSION     XP_061008606.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152623.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..234
                     /product="BTB/POZ domain-containing protein KCTD5 isoform
                     X2"
                     /calculated_mol_wt=25841
     Region          40..151
                     /region_name="BTB_POZ_KCTD5"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in potassium
                     channel tetramerization domain-containing protein 5
                     (KCTD5); cd18390"
                     /db_xref="CDD:349698"
     Site            order(43,45,49,51..52,55..58,61,83,91..95,98,104,107..108,
                     110,112..119,121,124)
                     /site_type="other"
                     /note="pentamer interface [polypeptide binding]"
                     /db_xref="CDD:349698"
     CDS             1..234
                     /gene="KCTD5"
                     /coded_by="XM_061152623.1:18..722"
                     /db_xref="GeneID:133063357"
ORIGIN      
        1 maenhcellp papgglgagl ggglcrrcsa glgalaqrpg svskwvrlnv ggtyflttrq
       61 tlcrdpksfl yrlcqadpdl dsdkdetgay lidrdptyfg pvlnylrhgk lvinkdlaee
      121 gvleeaefyn itsliklvkd kirerdskts qvpvkhvyrv lqcqeeeltq mvstmsdgwk
      181 feqlvsigss ynygsedqae flcvvskelh nsphgpasep sekakilqer gsrm
//
LOCUS       XP_061008607             325 aa            linear   MAM 02-DEC-2023
DEFINITION  brain-specific serine protease 4 [Dama dama].
ACCESSION   XP_061008607
VERSION     XP_061008607.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152624.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..325
                     /product="brain-specific serine protease 4"
                     /calculated_mol_wt=34990
     Region          50..288
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            50
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(90,141,242)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(236,261,263)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..325
                     /gene="PRSS22"
                     /coded_by="XM_061152624.1:153..1130"
                     /db_xref="GeneID:133063358"
ORIGIN      
        1 mvvpatppll gapclrvlas llilaapatl davktagppa cgkrlqlnri vggedsldae
       61 wpwvvsirkn gthhcagsll tsrwvltaah cfkdnldkpt qfsvllgawq lgnpgprsqe
      121 vgiawaqphp vyswkegsra dialvrlera iqfservlpi clpdstvqls sdtdcwiagw
      181 gsihdgvplp hpqtlqklkv piidsatcsr lywrgagqga itedmlcagy legardaclg
      241 dsggplmcqv egtwllagvi swgegcaern rpgvyislaa hrswvqrivq gvqlrgrsqq
      301 ggpagrrgwa lgarrprrae rhhtd
//
LOCUS       XP_061008608             314 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protease serine 11D-like isoform X1 [Dama dama].
ACCESSION   XP_061008608
VERSION     XP_061008608.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152625.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..314
                     /product="transmembrane protease serine 11D-like isoform
                     X1"
                     /calculated_mol_wt=34526
     Region          28..>164
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            28
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     CDS             1..314
                     /gene="LOC133063359"
                     /coded_by="XM_061152625.1:51..995"
                     /db_xref="GeneID:133063359"
ORIGIN      
        1 mslpptaqpg vrlsipgpcg lqgiqvrvmg gneaklgrwp wqgslrwnkv hscgasllnr
       61 rwvlsaahcf qknsypsdws vqfgelsatp siwslraflr rygvqdiitf pqfrrksqhd
      121 ialvklsspv tfnkhvqpic ivssseefkn rndcwvtgwg diseiesevg drragegsgi
      181 rqalcrpahq lqgpclslcp lcprffpsav gphllphrra glsahtlssp slpeaplptp
      241 aapacrgvsf gvhevlgctf qkstglfffl eiqftkhknh pfkvynsgts lvvwwlrlcp
      301 stagghgfnp wlgn
//
LOCUS       XP_061008609             302 aa            linear   MAM 02-DEC-2023
DEFINITION  serine protease 41-like isoform X2 [Dama dama].
ACCESSION   XP_061008609
VERSION     XP_061008609.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152626.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..302
                     /product="serine protease 41-like isoform X2"
                     /calculated_mol_wt=33867
     Region          28..265
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            28
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(68,120,221)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(215,240,242)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..302
                     /gene="LOC133063359"
                     /coded_by="XM_061152626.1:51..959"
                     /db_xref="GeneID:133063359"
ORIGIN      
        1 mslpptaqpg vrlsipgpcg lqgiqvrvmg gneaklgrwp wqgslrwnkv hscgasllnr
       61 rwvlsaahcf qknsypsdws vqfgelsatp siwslraflr rygvqdiitf pqfrrksqhd
      121 ialvklsspv tfnkhvqpic ivssseefkn rndcwvtgwg diseieklpp pynlqevqvs
      181 iinksrcsyl fqqpyyrsni nydmicagse dgdadsckgd sggplvcekn grwiqigivs
      241 wgvgcgrrnr pgvytnvsly fnwiqlltar stprpgpsrw llplallwtp fllrmacahl
      301 sp
//
LOCUS       XP_061008610             255 aa            linear   MAM 02-DEC-2023
DEFINITION  testisin-like isoform X3 [Dama dama].
ACCESSION   XP_061008610
VERSION     XP_061008610.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152627.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..255
                     /product="testisin-like isoform X3"
                     /calculated_mol_wt=28674
     Region          28..>218
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            28
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     CDS             1..255
                     /gene="LOC133063359"
                     /coded_by="XM_061152627.1:51..818"
                     /db_xref="GeneID:133063359"
ORIGIN      
        1 mslpptaqpg vrlsipgpcg lqgiqvrvmg gneaklgrwp wqgslrwnkv hscgasllnr
       61 rwvlsaahcf qknsypsdws vqfgelsatp siwslraflr rygvqdiitf pqfrrksqhd
      121 ialvklsspv tfnkhvqpic ivssseefkn rndcwvtgwg diseieklpp pynlqevqvs
      181 iinksrcsyl fqqpyyrsni nydmicagse dgdadsckll tarstprpgp srwllplall
      241 wtpfllrmac ahlsp
//
LOCUS       XP_061008611             157 aa            linear   MAM 02-DEC-2023
DEFINITION  zymogen granule protein 16 homolog B-like [Dama dama].
ACCESSION   XP_061008611
VERSION     XP_061008611.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152628.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..157
                     /product="zymogen granule protein 16 homolog B-like"
                     /calculated_mol_wt=17527
     Region          22..150
                     /region_name="Jacalin_ZG16_like"
                     /note="Jacalin-like lectin domain of the zymogen granule
                     protein 16 and related proteins; cd09611"
                     /db_xref="CDD:187707"
     Site            order(25..26,47..48,51,53,71..72,93..95,97,115,138,141,
                     143)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:187707"
     CDS             1..157
                     /gene="LOC133063361"
                     /coded_by="XM_061152628.1:129..602"
                     /db_xref="GeneID:133063361"
ORIGIN      
        1 mllwltlall wsptcwagev ygsgggtyfs tsrdfqndit girvfigplg liksiqvryg
       61 sswsakygap ggtpqetilq peehivgiyg syknflryla iytnqgrqfp fgkedgntfi
      121 efpddsdkvl trvyghyrll gitsigfewg ypsflnk
//
LOCUS       XP_061008612            2743 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/arginine repetitive matrix protein 2 isoform X1 [Dama dama].
ACCESSION   XP_061008612
VERSION     XP_061008612.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152629.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2743
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2743
                     /product="serine/arginine repetitive matrix protein 2
                     isoform X1"
                     /calculated_mol_wt=297727
     Region          39..102
                     /region_name="cwf21_SRRM2"
                     /note="cwf21 domain found in serine/arginine repetitive
                     matrix protein 2; cd21375"
                     /db_xref="CDD:410601"
     Region          <317..>400
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          <2013..2445
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <2308..2743
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..2743
                     /gene="SRRM2"
                     /coded_by="XM_061152629.1:183..8414"
                     /db_xref="GeneID:133063362"
ORIGIN      
        1 myngiglptp rgsgtngyvq rnlslvrgrr gerpdykgee elrrleaalv krpnpdildh
       61 erkrrvelrc leleemmeeq gyeeqqiqek vatfrlmlle kdvnpggkee npgqrpavte
      121 thqlaelnek knerlraafg isdsyvdgss fdpqrrarea kqpapeppkp yslvressss
      181 rsptpkqkkk kkkkdrgrrs esssprrerk ksskkkkhrs eseskkrkhr sptpkskrks
      241 kdkkrkrsrs ttpapksrra hrstsadsas ssdtsrsrsr saaakthtta ltgrspspal
      301 grrgegdvpp reagtanigq psspepstkq psspcedkdk dkkeksavrp spspersntg
      361 peppaptlll aeqhggspqp lattplsqep vnppseaspa qghsppkspe kppqsssesc
      421 ppspqptkvs rhassspesp kpapapgsrr essspasksr shgrakraks hshtpsrrvg
      481 rsrsptttkr grsrsrtptk rghsrsrspq wrrsrsaqrw grsrspqrrg rsrspqrpgw
      541 srsrnaqrrg rsrsarrgrs hsrspatrgr srsrtparrg rsrsrtptrr rsrsrtparr
      601 rsrsrtparr grsrsrtpar rrsrtrspvr rrsrsrspar rsgrsrsrtp arrgrsrsrt
      661 parrsgrsrs rtptrrsgrs rsrtpnrrgr sqsrtparrg rsrsrslvrr grshsrtppr
      721 rgrsgssser knksrtsqrr srsnsspemk ksrlssrrsr slssprskak srlsvrrsls
      781 esspcpkqks qtpprrsrsg ssqrkaksrt plrrsrsgss ppgnqksktp srqshssssp
      841 qpkmksgtpp rqgsitspqv neesatpqrr srsesspdpe vksrtpsrhs csgsspsrvk
      901 sgtpprrsrs gssspqpkvk avtspvqshs gfsspspsrm tsktpprqsr svspcsktes
      961 rllqrhshsr ssspdtkvkp gtpprqshsg stspcpkaks qtppghnlhg skspcsqeks
     1021 kdslaqscsg sfslcpgvks stppsflqqk gqsptspdsr sgtsspemrp sysespylqs
     1081 ksqtppksic srssspvael tprsptrgel saspklksgi speqrrsqsd sfsypaidsk
     1141 pllgqsrlep seskektglv lqedvsaspl rprdklsppp vqnrpesspi lrdtprtpsr
     1201 erggvgsspd tkdqssalak psqdeelmev vekpeessnq vlphlspelk emagsnvess
     1261 peierpavpl tldqsqlqas seevpamasa wsgphfspeh kelsnsppre nsfgsplefr
     1321 nsggpvaemn tgfspegkdl ngpfpnqlet dpsldvkeqs trssrhssse lspdvvekag
     1381 mssnqsvssp vldtiprtps rersssassp elkdglprtp srrsrsgssp glrdgsgtps
     1441 rhslsgsspg mkdiprtpsr grsecdsspe pkalpqtprp rsrspsspel nnkcltpqre
     1501 rsgsessveq ktvartplgq rrrsgssqel dgkpsaspqe rsesdsspds kaktrmplrq
     1561 rshsgsspev dsksrpsprr srsgsspevk ekpraapraq sgsdsspepk apaprvlprr
     1621 srsgssskgr gpspegssss esspehppks rtarrssrss pepktksrtp prrrssrssp
     1681 eltrkarlsr rsrsassspe trsrtpprrr rspsvsspep aeksrssrrr rsassprakt
     1741 asrrgrspsp kprglqrsrs rsrrektrat rrrdrsgssq stsrrrqrsr srsrvtrrrr
     1801 ggsgyhsrsp arqessrtss rrrrgrsrtp ptsrkrsrsr tspapwkrsr sraspathrr
     1861 srsrtplvsr rrsrsrtspv srrrsrsrts vtrrrsrsra spvsrrrsrs rtppvtrrrs
     1921 rsrtptrrrs rsrtppvtrr rsrsrtppvt rrrsrsrtsp itrrrsrsrt spvtrrrsrs
     1981 rtspvtrrrs rsrtspvtrr rsrsrtppai rrrsrsrtpl lprkrsrsrs plairrrsrs
     2041 rtprttrgkr sltrsppair rrsasgsssd rsrsatppat rnhsgsrtpp valnssrmgc
     2101 fsrpsmsptp ldrcrspgvl eplgssrtpm svlqqaggsm mdgpgpripd hprasvpenh
     2161 aqsrialalt aislgtarpp psmsaaglaa rmsqvpapvp lmslrtapaa slasripaas
     2221 aaamnlasar tpalpsavnl adsrtpaaaa amnlasprta vapsavnlad prtptapavn
     2281 lagartpaal aalsltgsgt aptaanypss srapqapapa nlvgprsaha tapvniassr
     2341 tppalapanl tsarmapals ganltsprvp lsayervsgr tspplldrar srtppggpgs
     2401 rtppsapsqs rvtserapsp asrmvqapsq salppaqdrp rspvpsafsd qsrsllaqtp
     2461 avagsqslss gtvakttssa gdhngmlsgp vpgvshpegg dppacagaqq pstlaalqpa
     2521 kerrssssss ssssssssss sssssssssg ssssdsegss lpaqpevalk rvpspapapk
     2581 eavregrpqe papakrkrrs ssssssssss ssssssssss ssssssssss sssssstsss
     2641 pspakpgpqa lpkpaspkka ppgerrsrsp rkpidslrds rslsyspaer rrpspqpspr
     2701 dqqsssergs rrsqrgdsrs pghkrrketp sprpvrhrss rsp
//
LOCUS       XP_061008613            2743 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/arginine repetitive matrix protein 2 isoform X1 [Dama dama].
ACCESSION   XP_061008613
VERSION     XP_061008613.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152630.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2743
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2743
                     /product="serine/arginine repetitive matrix protein 2
                     isoform X1"
                     /calculated_mol_wt=297727
     Region          39..102
                     /region_name="cwf21_SRRM2"
                     /note="cwf21 domain found in serine/arginine repetitive
                     matrix protein 2; cd21375"
                     /db_xref="CDD:410601"
     Region          <317..>400
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          <2013..2445
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <2308..2743
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..2743
                     /gene="SRRM2"
                     /coded_by="XM_061152630.1:204..8435"
                     /db_xref="GeneID:133063362"
ORIGIN      
        1 myngiglptp rgsgtngyvq rnlslvrgrr gerpdykgee elrrleaalv krpnpdildh
       61 erkrrvelrc leleemmeeq gyeeqqiqek vatfrlmlle kdvnpggkee npgqrpavte
      121 thqlaelnek knerlraafg isdsyvdgss fdpqrrarea kqpapeppkp yslvressss
      181 rsptpkqkkk kkkkdrgrrs esssprrerk ksskkkkhrs eseskkrkhr sptpkskrks
      241 kdkkrkrsrs ttpapksrra hrstsadsas ssdtsrsrsr saaakthtta ltgrspspal
      301 grrgegdvpp reagtanigq psspepstkq psspcedkdk dkkeksavrp spspersntg
      361 peppaptlll aeqhggspqp lattplsqep vnppseaspa qghsppkspe kppqsssesc
      421 ppspqptkvs rhassspesp kpapapgsrr essspasksr shgrakraks hshtpsrrvg
      481 rsrsptttkr grsrsrtptk rghsrsrspq wrrsrsaqrw grsrspqrrg rsrspqrpgw
      541 srsrnaqrrg rsrsarrgrs hsrspatrgr srsrtparrg rsrsrtptrr rsrsrtparr
      601 rsrsrtparr grsrsrtpar rrsrtrspvr rrsrsrspar rsgrsrsrtp arrgrsrsrt
      661 parrsgrsrs rtptrrsgrs rsrtpnrrgr sqsrtparrg rsrsrslvrr grshsrtppr
      721 rgrsgssser knksrtsqrr srsnsspemk ksrlssrrsr slssprskak srlsvrrsls
      781 esspcpkqks qtpprrsrsg ssqrkaksrt plrrsrsgss ppgnqksktp srqshssssp
      841 qpkmksgtpp rqgsitspqv neesatpqrr srsesspdpe vksrtpsrhs csgsspsrvk
      901 sgtpprrsrs gssspqpkvk avtspvqshs gfsspspsrm tsktpprqsr svspcsktes
      961 rllqrhshsr ssspdtkvkp gtpprqshsg stspcpkaks qtppghnlhg skspcsqeks
     1021 kdslaqscsg sfslcpgvks stppsflqqk gqsptspdsr sgtsspemrp sysespylqs
     1081 ksqtppksic srssspvael tprsptrgel saspklksgi speqrrsqsd sfsypaidsk
     1141 pllgqsrlep seskektglv lqedvsaspl rprdklsppp vqnrpesspi lrdtprtpsr
     1201 erggvgsspd tkdqssalak psqdeelmev vekpeessnq vlphlspelk emagsnvess
     1261 peierpavpl tldqsqlqas seevpamasa wsgphfspeh kelsnsppre nsfgsplefr
     1321 nsggpvaemn tgfspegkdl ngpfpnqlet dpsldvkeqs trssrhssse lspdvvekag
     1381 mssnqsvssp vldtiprtps rersssassp elkdglprtp srrsrsgssp glrdgsgtps
     1441 rhslsgsspg mkdiprtpsr grsecdsspe pkalpqtprp rsrspsspel nnkcltpqre
     1501 rsgsessveq ktvartplgq rrrsgssqel dgkpsaspqe rsesdsspds kaktrmplrq
     1561 rshsgsspev dsksrpsprr srsgsspevk ekpraapraq sgsdsspepk apaprvlprr
     1621 srsgssskgr gpspegssss esspehppks rtarrssrss pepktksrtp prrrssrssp
     1681 eltrkarlsr rsrsassspe trsrtpprrr rspsvsspep aeksrssrrr rsassprakt
     1741 asrrgrspsp kprglqrsrs rsrrektrat rrrdrsgssq stsrrrqrsr srsrvtrrrr
     1801 ggsgyhsrsp arqessrtss rrrrgrsrtp ptsrkrsrsr tspapwkrsr sraspathrr
     1861 srsrtplvsr rrsrsrtspv srrrsrsrts vtrrrsrsra spvsrrrsrs rtppvtrrrs
     1921 rsrtptrrrs rsrtppvtrr rsrsrtppvt rrrsrsrtsp itrrrsrsrt spvtrrrsrs
     1981 rtspvtrrrs rsrtspvtrr rsrsrtppai rrrsrsrtpl lprkrsrsrs plairrrsrs
     2041 rtprttrgkr sltrsppair rrsasgsssd rsrsatppat rnhsgsrtpp valnssrmgc
     2101 fsrpsmsptp ldrcrspgvl eplgssrtpm svlqqaggsm mdgpgpripd hprasvpenh
     2161 aqsrialalt aislgtarpp psmsaaglaa rmsqvpapvp lmslrtapaa slasripaas
     2221 aaamnlasar tpalpsavnl adsrtpaaaa amnlasprta vapsavnlad prtptapavn
     2281 lagartpaal aalsltgsgt aptaanypss srapqapapa nlvgprsaha tapvniassr
     2341 tppalapanl tsarmapals ganltsprvp lsayervsgr tspplldrar srtppggpgs
     2401 rtppsapsqs rvtserapsp asrmvqapsq salppaqdrp rspvpsafsd qsrsllaqtp
     2461 avagsqslss gtvakttssa gdhngmlsgp vpgvshpegg dppacagaqq pstlaalqpa
     2521 kerrssssss ssssssssss sssssssssg ssssdsegss lpaqpevalk rvpspapapk
     2581 eavregrpqe papakrkrrs ssssssssss ssssssssss ssssssssss sssssstsss
     2641 pspakpgpqa lpkpaspkka ppgerrsrsp rkpidslrds rslsyspaer rrpspqpspr
     2701 dqqsssergs rrsqrgdsrs pghkrrketp sprpvrhrss rsp
//
LOCUS       XP_061008615            2743 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/arginine repetitive matrix protein 2 isoform X1 [Dama dama].
ACCESSION   XP_061008615
VERSION     XP_061008615.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152632.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2743
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2743
                     /product="serine/arginine repetitive matrix protein 2
                     isoform X1"
                     /calculated_mol_wt=297727
     Region          39..102
                     /region_name="cwf21_SRRM2"
                     /note="cwf21 domain found in serine/arginine repetitive
                     matrix protein 2; cd21375"
                     /db_xref="CDD:410601"
     Region          <317..>400
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          <2013..2445
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <2308..2743
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..2743
                     /gene="SRRM2"
                     /coded_by="XM_061152632.1:114..8345"
                     /db_xref="GeneID:133063362"
ORIGIN      
        1 myngiglptp rgsgtngyvq rnlslvrgrr gerpdykgee elrrleaalv krpnpdildh
       61 erkrrvelrc leleemmeeq gyeeqqiqek vatfrlmlle kdvnpggkee npgqrpavte
      121 thqlaelnek knerlraafg isdsyvdgss fdpqrrarea kqpapeppkp yslvressss
      181 rsptpkqkkk kkkkdrgrrs esssprrerk ksskkkkhrs eseskkrkhr sptpkskrks
      241 kdkkrkrsrs ttpapksrra hrstsadsas ssdtsrsrsr saaakthtta ltgrspspal
      301 grrgegdvpp reagtanigq psspepstkq psspcedkdk dkkeksavrp spspersntg
      361 peppaptlll aeqhggspqp lattplsqep vnppseaspa qghsppkspe kppqsssesc
      421 ppspqptkvs rhassspesp kpapapgsrr essspasksr shgrakraks hshtpsrrvg
      481 rsrsptttkr grsrsrtptk rghsrsrspq wrrsrsaqrw grsrspqrrg rsrspqrpgw
      541 srsrnaqrrg rsrsarrgrs hsrspatrgr srsrtparrg rsrsrtptrr rsrsrtparr
      601 rsrsrtparr grsrsrtpar rrsrtrspvr rrsrsrspar rsgrsrsrtp arrgrsrsrt
      661 parrsgrsrs rtptrrsgrs rsrtpnrrgr sqsrtparrg rsrsrslvrr grshsrtppr
      721 rgrsgssser knksrtsqrr srsnsspemk ksrlssrrsr slssprskak srlsvrrsls
      781 esspcpkqks qtpprrsrsg ssqrkaksrt plrrsrsgss ppgnqksktp srqshssssp
      841 qpkmksgtpp rqgsitspqv neesatpqrr srsesspdpe vksrtpsrhs csgsspsrvk
      901 sgtpprrsrs gssspqpkvk avtspvqshs gfsspspsrm tsktpprqsr svspcsktes
      961 rllqrhshsr ssspdtkvkp gtpprqshsg stspcpkaks qtppghnlhg skspcsqeks
     1021 kdslaqscsg sfslcpgvks stppsflqqk gqsptspdsr sgtsspemrp sysespylqs
     1081 ksqtppksic srssspvael tprsptrgel saspklksgi speqrrsqsd sfsypaidsk
     1141 pllgqsrlep seskektglv lqedvsaspl rprdklsppp vqnrpesspi lrdtprtpsr
     1201 erggvgsspd tkdqssalak psqdeelmev vekpeessnq vlphlspelk emagsnvess
     1261 peierpavpl tldqsqlqas seevpamasa wsgphfspeh kelsnsppre nsfgsplefr
     1321 nsggpvaemn tgfspegkdl ngpfpnqlet dpsldvkeqs trssrhssse lspdvvekag
     1381 mssnqsvssp vldtiprtps rersssassp elkdglprtp srrsrsgssp glrdgsgtps
     1441 rhslsgsspg mkdiprtpsr grsecdsspe pkalpqtprp rsrspsspel nnkcltpqre
     1501 rsgsessveq ktvartplgq rrrsgssqel dgkpsaspqe rsesdsspds kaktrmplrq
     1561 rshsgsspev dsksrpsprr srsgsspevk ekpraapraq sgsdsspepk apaprvlprr
     1621 srsgssskgr gpspegssss esspehppks rtarrssrss pepktksrtp prrrssrssp
     1681 eltrkarlsr rsrsassspe trsrtpprrr rspsvsspep aeksrssrrr rsassprakt
     1741 asrrgrspsp kprglqrsrs rsrrektrat rrrdrsgssq stsrrrqrsr srsrvtrrrr
     1801 ggsgyhsrsp arqessrtss rrrrgrsrtp ptsrkrsrsr tspapwkrsr sraspathrr
     1861 srsrtplvsr rrsrsrtspv srrrsrsrts vtrrrsrsra spvsrrrsrs rtppvtrrrs
     1921 rsrtptrrrs rsrtppvtrr rsrsrtppvt rrrsrsrtsp itrrrsrsrt spvtrrrsrs
     1981 rtspvtrrrs rsrtspvtrr rsrsrtppai rrrsrsrtpl lprkrsrsrs plairrrsrs
     2041 rtprttrgkr sltrsppair rrsasgsssd rsrsatppat rnhsgsrtpp valnssrmgc
     2101 fsrpsmsptp ldrcrspgvl eplgssrtpm svlqqaggsm mdgpgpripd hprasvpenh
     2161 aqsrialalt aislgtarpp psmsaaglaa rmsqvpapvp lmslrtapaa slasripaas
     2221 aaamnlasar tpalpsavnl adsrtpaaaa amnlasprta vapsavnlad prtptapavn
     2281 lagartpaal aalsltgsgt aptaanypss srapqapapa nlvgprsaha tapvniassr
     2341 tppalapanl tsarmapals ganltsprvp lsayervsgr tspplldrar srtppggpgs
     2401 rtppsapsqs rvtserapsp asrmvqapsq salppaqdrp rspvpsafsd qsrsllaqtp
     2461 avagsqslss gtvakttssa gdhngmlsgp vpgvshpegg dppacagaqq pstlaalqpa
     2521 kerrssssss ssssssssss sssssssssg ssssdsegss lpaqpevalk rvpspapapk
     2581 eavregrpqe papakrkrrs ssssssssss ssssssssss ssssssssss sssssstsss
     2641 pspakpgpqa lpkpaspkka ppgerrsrsp rkpidslrds rslsyspaer rrpspqpspr
     2701 dqqsssergs rrsqrgdsrs pghkrrketp sprpvrhrss rsp
//
LOCUS       XP_061008616            2742 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/arginine repetitive matrix protein 2 isoform X2 [Dama dama].
ACCESSION   XP_061008616
VERSION     XP_061008616.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152633.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2742
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2742
                     /product="serine/arginine repetitive matrix protein 2
                     isoform X2"
                     /calculated_mol_wt=297639
     Region          39..102
                     /region_name="cwf21_SRRM2"
                     /note="cwf21 domain found in serine/arginine repetitive
                     matrix protein 2; cd21375"
                     /db_xref="CDD:410601"
     Region          <317..>400
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          <2013..2445
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <2308..2733
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..2742
                     /gene="SRRM2"
                     /coded_by="XM_061152633.1:184..8412"
                     /db_xref="GeneID:133063362"
ORIGIN      
        1 myngiglptp rgsgtngyvq rnlslvrgrr gerpdykgee elrrleaalv krpnpdildh
       61 erkrrvelrc leleemmeeq gyeeqqiqek vatfrlmlle kdvnpggkee npgqrpavte
      121 thqlaelnek knerlraafg isdsyvdgss fdpqrrarea kqpapeppkp yslvressss
      181 rsptpkqkkk kkkkdrgrrs esssprrerk ksskkkkhrs eseskkrkhr sptpkskrks
      241 kdkkrkrsrs ttpapksrra hrstsadsas ssdtsrsrsr saaakthtta ltgrspspal
      301 grrgegdvpp reagtanigq psspepstkq psspcedkdk dkkeksavrp spspersntg
      361 peppaptlll aeqhggspqp lattplsqep vnppseaspa qghsppkspe kppqsssesc
      421 ppspqptkvs rhassspesp kpapapgsrr essspasksr shgrakraks hshtpsrrvg
      481 rsrsptttkr grsrsrtptk rghsrsrspq wrrsrsaqrw grsrspqrrg rsrspqrpgw
      541 srsrnaqrrg rsrsarrgrs hsrspatrgr srsrtparrg rsrsrtptrr rsrsrtparr
      601 rsrsrtparr grsrsrtpar rrsrtrspvr rrsrsrspar rsgrsrsrtp arrgrsrsrt
      661 parrsgrsrs rtptrrsgrs rsrtpnrrgr sqsrtparrg rsrsrslvrr grshsrtppr
      721 rgrsgssser knksrtsqrr srsnsspemk ksrlssrrsr slssprskak srlsvrrsls
      781 esspcpkqks qtpprrsrsg ssqrkaksrt plrrsrsgss ppgnqksktp srqshssssp
      841 qpkmksgtpp rqgsitspqv neesatpqrr srsesspdpe vksrtpsrhs csgsspsrvk
      901 sgtpprrsrs gssspqpkvk avtspvqshs gfsspspsrm tsktpprqsr svspcsktes
      961 rllqrhshsr ssspdtkvkp gtpprqshsg stspcpkaks qtppghnlhg skspcsqeks
     1021 kdslaqscsg sfslcpgvks stppsflqqk gqsptspdsr sgtsspemrp sysespylqs
     1081 ksqtppksic srssspvael tprsptrgel saspklksgi speqrrsqsd sfsypaidsk
     1141 pllgqsrlep seskektglv lqedvsaspl rprdklsppp vqnrpesspi lrdtprtpsr
     1201 erggvgsspd tkdqssalak psqdeelmev vekpeessnq vlphlspelk emagsnvess
     1261 peierpavpl tldqsqlqas seevpamasa wsgphfspeh kelsnsppre nsfgsplefr
     1321 nsggpvaemn tgfspegkdl ngpfpnqlet dpsldvkeqs trssrhssse lspdvvekag
     1381 mssnqsvssp vldtiprtps rersssassp elkdglprtp srrsrsgssp glrdgsgtps
     1441 rhslsgsspg mkdiprtpsr grsecdsspe pkalpqtprp rsrspsspel nnkcltpqre
     1501 rsgsessveq ktvartplgq rrrsgssqel dgkpsaspqe rsesdsspds kaktrmplrq
     1561 rshsgsspev dsksrpsprr srsgsspevk ekpraapraq sgsdsspepk apaprvlprr
     1621 srsgssskgr gpspegssss esspehppks rtarrssrss pepktksrtp prrrssrssp
     1681 eltrkarlsr rsrsassspe trsrtpprrr rspsvsspep aeksrssrrr rsassprakt
     1741 asrrgrspsp kprglqrsrs rsrrektrat rrrdrsgssq stsrrrqrsr srsrvtrrrr
     1801 ggsgyhsrsp arqessrtss rrrrgrsrtp ptsrkrsrsr tspapwkrsr sraspathrr
     1861 srsrtplvsr rrsrsrtspv srrrsrsrts vtrrrsrsra spvsrrrsrs rtppvtrrrs
     1921 rsrtptrrrs rsrtppvtrr rsrsrtppvt rrrsrsrtsp itrrrsrsrt spvtrrrsrs
     1981 rtspvtrrrs rsrtspvtrr rsrsrtppai rrrsrsrtpl lprkrsrsrs plairrrsrs
     2041 rtprttrgkr sltrsppair rrsasgsssd rsrsatppat rnhsgsrtpp valnssrmgc
     2101 fsrpsmsptp ldrcrspgvl eplgssrtpm svlqqaggsm mdgpgpripd hprasvpenh
     2161 aqsrialalt aislgtarpp psmsaaglaa rmsqvpapvp lmslrtapaa slasripaas
     2221 aaamnlasar tpalpsavnl adsrtpaaaa amnlasprta vapsavnlad prtptapavn
     2281 lagartpaal aalsltgsgt aptaanypss srapqapapa nlvgprsaha tapvniassr
     2341 tppalapanl tsarmapals ganltsprvp lsayervsgr tspplldrar srtppggpgs
     2401 rtppsapsqs rvtserapsp asrmvqapsq salppaqdrp rspvpsafsd qsrsllaqtp
     2461 avagsqslss gtvakttssa gdhngmlsgp vpgvshpegg dppacagaqq pstlaalqpa
     2521 kerrssssss ssssssssss sssssssssg ssssdsegss lpaqpevalk rvpspapapk
     2581 eavregrpqe papakrkrrs ssssssssss ssssssssss ssssssssss sssssstsss
     2641 pspakpgpqa lpkpaspkka ppgerrsrsp rkpidslrds rslsyspaer rrpspqpspr
     2701 dqqssergsr rsqrgdsrsp ghkrrketps prpvrhrssr sp
//
LOCUS       XP_061008617            2742 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/arginine repetitive matrix protein 2 isoform X3 [Dama dama].
ACCESSION   XP_061008617
VERSION     XP_061008617.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152634.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2742
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2742
                     /product="serine/arginine repetitive matrix protein 2
                     isoform X3"
                     /calculated_mol_wt=297570
     Region          39..102
                     /region_name="cwf21_SRRM2"
                     /note="cwf21 domain found in serine/arginine repetitive
                     matrix protein 2; cd21375"
                     /db_xref="CDD:410601"
     Region          <316..>399
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          <2012..2444
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <2307..2742
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..2742
                     /gene="SRRM2"
                     /coded_by="XM_061152634.1:184..8412"
                     /db_xref="GeneID:133063362"
ORIGIN      
        1 myngiglptp rgsgtngyvq rnlslvrgrr gerpdykgee elrrleaalv krpnpdildh
       61 erkrrvelrc leleemmeeq gyeeqqiqek vatfrlmlle kdvnpggkee npgqrpavte
      121 thqlaelnek knerlraafg isdsyvdgss fdpqrrarea kqpapeppkp yslvressss
      181 rsptpkqkkk kkkkdrgrse sssprrerkk sskkkkhrse seskkrkhrs ptpkskrksk
      241 dkkrkrsrst tpapksrrah rstsadsass sdtsrsrsrs aaakthttal tgrspspalg
      301 rrgegdvppr eagtanigqp sspepstkqp sspcedkdkd kkeksavrps pspersntgp
      361 eppaptllla eqhggspqpl attplsqepv nppseaspaq ghsppkspek ppqsssescp
      421 pspqptkvsr hassspespk papapgsrre ssspasksrs hgrakraksh shtpsrrvgr
      481 srsptttkrg rsrsrtptkr ghsrsrspqw rrsrsaqrwg rsrspqrrgr srspqrpgws
      541 rsrnaqrrgr srsarrgrsh srspatrgrs rsrtparrgr srsrtptrrr srsrtparrr
      601 srsrtparrg rsrsrtparr rsrtrspvrr rsrsrsparr sgrsrsrtpa rrgrsrsrtp
      661 arrsgrsrsr tptrrsgrsr srtpnrrgrs qsrtparrgr srsrslvrrg rshsrtpprr
      721 grsgssserk nksrtsqrrs rsnsspemkk srlssrrsrs lssprskaks rlsvrrslse
      781 sspcpkqksq tpprrsrsgs sqrkaksrtp lrrsrsgssp pgnqksktps rqshsssspq
      841 pkmksgtppr qgsitspqvn eesatpqrrs rsesspdpev ksrtpsrhsc sgsspsrvks
      901 gtpprrsrsg ssspqpkvka vtspvqshsg fsspspsrmt sktpprqsrs vspcsktesr
      961 llqrhshsrs sspdtkvkpg tpprqshsgs tspcpkaksq tppghnlhgs kspcsqeksk
     1021 dslaqscsgs fslcpgvkss tppsflqqkg qsptspdsrs gtsspemrps ysespylqsk
     1081 sqtppksics rssspvaelt prsptrgels aspklksgis peqrrsqsds fsypaidskp
     1141 llgqsrleps eskektglvl qedvsasplr prdklspppv qnrpesspil rdtprtpsre
     1201 rggvgsspdt kdqssalakp sqdeelmevv ekpeessnqv lphlspelke magsnvessp
     1261 eierpavplt ldqsqlqass eevpamasaw sgphfspehk elsnsppren sfgsplefrn
     1321 sggpvaemnt gfspegkdln gpfpnqletd psldvkeqst rssrhsssel spdvvekagm
     1381 ssnqsvsspv ldtiprtpsr ersssasspe lkdglprtps rrsrsgsspg lrdgsgtpsr
     1441 hslsgsspgm kdiprtpsrg rsecdsspep kalpqtprpr srspsspeln nkcltpqrer
     1501 sgsessveqk tvartplgqr rrsgssqeld gkpsaspqer sesdsspdsk aktrmplrqr
     1561 shsgsspevd sksrpsprrs rsgsspevke kpraapraqs gsdsspepka paprvlprrs
     1621 rsgssskgrg pspegsssse sspehppksr tarrssrssp epktksrtpp rrrssrsspe
     1681 ltrkarlsrr srsassspet rsrtpprrrr spsvsspepa eksrssrrrr sassprakta
     1741 srrgrspspk prglqrsrsr srrektratr rrdrsgssqs tsrrrqrsrs rsrvtrrrrg
     1801 gsgyhsrspa rqessrtssr rrrgrsrtpp tsrkrsrsrt spapwkrsrs raspathrrs
     1861 rsrtplvsrr rsrsrtspvs rrrsrsrtsv trrrsrsras pvsrrrsrsr tppvtrrrsr
     1921 srtptrrrsr srtppvtrrr srsrtppvtr rrsrsrtspi trrrsrsrts pvtrrrsrsr
     1981 tspvtrrrsr srtspvtrrr srsrtppair rrsrsrtpll prkrsrsrsp lairrrsrsr
     2041 tprttrgkrs ltrsppairr rsasgsssdr srsatppatr nhsgsrtppv alnssrmgcf
     2101 srpsmsptpl drcrspgvle plgssrtpms vlqqaggsmm dgpgpripdh prasvpenha
     2161 qsrialalta islgtarppp smsaaglaar msqvpapvpl mslrtapaas lasripaasa
     2221 aamnlasart palpsavnla dsrtpaaaaa mnlasprtav apsavnladp rtptapavnl
     2281 agartpaala alsltgsgta ptaanypsss rapqapapan lvgprsahat apvniassrt
     2341 ppalapanlt sarmapalsg anltsprvpl sayervsgrt spplldrars rtppggpgsr
     2401 tppsapsqsr vtserapspa srmvqapsqs alppaqdrpr spvpsafsdq srsllaqtpa
     2461 vagsqslssg tvakttssag dhngmlsgpv pgvshpeggd ppacagaqqp stlaalqpak
     2521 errsssssss ssssssssss ssssssssgs sssdsegssl paqpevalkr vpspapapke
     2581 avregrpqep apakrkrrss ssssssssss ssssssssss ssssssssss ssssstsssp
     2641 spakpgpqal pkpaspkkap pgerrsrspr kpidslrdsr slsyspaerr rpspqpsprd
     2701 qqsssergsr rsqrgdsrsp ghkrrketps prpvrhrssr sp
//
LOCUS       XP_061008618            2709 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/arginine repetitive matrix protein 2 isoform X4 [Dama dama].
ACCESSION   XP_061008618
VERSION     XP_061008618.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152635.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2709
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2709
                     /product="serine/arginine repetitive matrix protein 2
                     isoform X4"
                     /calculated_mol_wt=293707
     Region          39..102
                     /region_name="cwf21_SRRM2"
                     /note="cwf21 domain found in serine/arginine repetitive
                     matrix protein 2; cd21375"
                     /db_xref="CDD:410601"
     Region          <317..>400
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          <2013..2445
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <2276..2679
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     CDS             1..2709
                     /gene="SRRM2"
                     /coded_by="XM_061152635.1:185..8314"
                     /db_xref="GeneID:133063362"
ORIGIN      
        1 myngiglptp rgsgtngyvq rnlslvrgrr gerpdykgee elrrleaalv krpnpdildh
       61 erkrrvelrc leleemmeeq gyeeqqiqek vatfrlmlle kdvnpggkee npgqrpavte
      121 thqlaelnek knerlraafg isdsyvdgss fdpqrrarea kqpapeppkp yslvressss
      181 rsptpkqkkk kkkkdrgrrs esssprrerk ksskkkkhrs eseskkrkhr sptpkskrks
      241 kdkkrkrsrs ttpapksrra hrstsadsas ssdtsrsrsr saaakthtta ltgrspspal
      301 grrgegdvpp reagtanigq psspepstkq psspcedkdk dkkeksavrp spspersntg
      361 peppaptlll aeqhggspqp lattplsqep vnppseaspa qghsppkspe kppqsssesc
      421 ppspqptkvs rhassspesp kpapapgsrr essspasksr shgrakraks hshtpsrrvg
      481 rsrsptttkr grsrsrtptk rghsrsrspq wrrsrsaqrw grsrspqrrg rsrspqrpgw
      541 srsrnaqrrg rsrsarrgrs hsrspatrgr srsrtparrg rsrsrtptrr rsrsrtparr
      601 rsrsrtparr grsrsrtpar rrsrtrspvr rrsrsrspar rsgrsrsrtp arrgrsrsrt
      661 parrsgrsrs rtptrrsgrs rsrtpnrrgr sqsrtparrg rsrsrslvrr grshsrtppr
      721 rgrsgssser knksrtsqrr srsnsspemk ksrlssrrsr slssprskak srlsvrrsls
      781 esspcpkqks qtpprrsrsg ssqrkaksrt plrrsrsgss ppgnqksktp srqshssssp
      841 qpkmksgtpp rqgsitspqv neesatpqrr srsesspdpe vksrtpsrhs csgsspsrvk
      901 sgtpprrsrs gssspqpkvk avtspvqshs gfsspspsrm tsktpprqsr svspcsktes
      961 rllqrhshsr ssspdtkvkp gtpprqshsg stspcpkaks qtppghnlhg skspcsqeks
     1021 kdslaqscsg sfslcpgvks stppsflqqk gqsptspdsr sgtsspemrp sysespylqs
     1081 ksqtppksic srssspvael tprsptrgel saspklksgi speqrrsqsd sfsypaidsk
     1141 pllgqsrlep seskektglv lqedvsaspl rprdklsppp vqnrpesspi lrdtprtpsr
     1201 erggvgsspd tkdqssalak psqdeelmev vekpeessnq vlphlspelk emagsnvess
     1261 peierpavpl tldqsqlqas seevpamasa wsgphfspeh kelsnsppre nsfgsplefr
     1321 nsggpvaemn tgfspegkdl ngpfpnqlet dpsldvkeqs trssrhssse lspdvvekag
     1381 mssnqsvssp vldtiprtps rersssassp elkdglprtp srrsrsgssp glrdgsgtps
     1441 rhslsgsspg mkdiprtpsr grsecdsspe pkalpqtprp rsrspsspel nnkcltpqre
     1501 rsgsessveq ktvartplgq rrrsgssqel dgkpsaspqe rsesdsspds kaktrmplrq
     1561 rshsgsspev dsksrpsprr srsgsspevk ekpraapraq sgsdsspepk apaprvlprr
     1621 srsgssskgr gpspegssss esspehppks rtarrssrss pepktksrtp prrrssrssp
     1681 eltrkarlsr rsrsassspe trsrtpprrr rspsvsspep aeksrssrrr rsassprakt
     1741 asrrgrspsp kprglqrsrs rsrrektrat rrrdrsgssq stsrrrqrsr srsrvtrrrr
     1801 ggsgyhsrsp arqessrtss rrrrgrsrtp ptsrkrsrsr tspapwkrsr sraspathrr
     1861 srsrtplvsr rrsrsrtspv srrrsrsrts vtrrrsrsra spvsrrrsrs rtppvtrrrs
     1921 rsrtptrrrs rsrtppvtrr rsrsrtppvt rrrsrsrtsp itrrrsrsrt spvtrrrsrs
     1981 rtspvtrrrs rsrtspvtrr rsrsrtppai rrrsrsrtpl lprkrsrsrs plairrrsrs
     2041 rtprttrgkr sltrsppair rrsasgsssd rsrsatppat rnhsgsrtpp valnssrmgc
     2101 fsrpsmsptp ldrcrspgvl eplgssrtpm svlqqaggsm mdgpgpripd hprasvpenh
     2161 aqsrialalt aislgtarpp psmsaaglaa rmsqvpapvp lmslrtapaa slasripaas
     2221 aaamnlasar tpalpsavnl adsrtpaaaa amnlasprta vapsavnlad prtptapavn
     2281 lagartpaal aalsltgsgt aptaanypss srapqapapa nlvgprsaha tapvniassr
     2341 tppalapanl tsarmapals ganltsprvp lsayervsgr tspplldrar srtppggpgs
     2401 rtppsapsqs rvtserapsp asrmvqapsq salppaqdrp rspvpsafsd qsrsllaqtp
     2461 avagsqslss gtvakttssa gdhngmlsgp vpgvshpegg dppacagaqq pstlaalqpa
     2521 kerrssssss ssssssssss sssssssssg ssssdsegss lpaqpevalk rvpspapapk
     2581 eavregrpqe papakrkrrs ssssssssss ssssssssss ssssssssss sssssstsss
     2641 pspakpgpqa lpkpaspkka ppgerslfpv slpprhslph vargiflkph iwllpslhks
     2701 frdalwpag
//
LOCUS       XP_061008619            2709 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/arginine repetitive matrix protein 2 isoform X4 [Dama dama].
ACCESSION   XP_061008619
VERSION     XP_061008619.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152636.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2709
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2709
                     /product="serine/arginine repetitive matrix protein 2
                     isoform X4"
                     /calculated_mol_wt=293707
     Region          39..102
                     /region_name="cwf21_SRRM2"
                     /note="cwf21 domain found in serine/arginine repetitive
                     matrix protein 2; cd21375"
                     /db_xref="CDD:410601"
     Region          <317..>400
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          <2013..2445
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <2276..2679
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     CDS             1..2709
                     /gene="SRRM2"
                     /coded_by="XM_061152636.1:185..8314"
                     /db_xref="GeneID:133063362"
ORIGIN      
        1 myngiglptp rgsgtngyvq rnlslvrgrr gerpdykgee elrrleaalv krpnpdildh
       61 erkrrvelrc leleemmeeq gyeeqqiqek vatfrlmlle kdvnpggkee npgqrpavte
      121 thqlaelnek knerlraafg isdsyvdgss fdpqrrarea kqpapeppkp yslvressss
      181 rsptpkqkkk kkkkdrgrrs esssprrerk ksskkkkhrs eseskkrkhr sptpkskrks
      241 kdkkrkrsrs ttpapksrra hrstsadsas ssdtsrsrsr saaakthtta ltgrspspal
      301 grrgegdvpp reagtanigq psspepstkq psspcedkdk dkkeksavrp spspersntg
      361 peppaptlll aeqhggspqp lattplsqep vnppseaspa qghsppkspe kppqsssesc
      421 ppspqptkvs rhassspesp kpapapgsrr essspasksr shgrakraks hshtpsrrvg
      481 rsrsptttkr grsrsrtptk rghsrsrspq wrrsrsaqrw grsrspqrrg rsrspqrpgw
      541 srsrnaqrrg rsrsarrgrs hsrspatrgr srsrtparrg rsrsrtptrr rsrsrtparr
      601 rsrsrtparr grsrsrtpar rrsrtrspvr rrsrsrspar rsgrsrsrtp arrgrsrsrt
      661 parrsgrsrs rtptrrsgrs rsrtpnrrgr sqsrtparrg rsrsrslvrr grshsrtppr
      721 rgrsgssser knksrtsqrr srsnsspemk ksrlssrrsr slssprskak srlsvrrsls
      781 esspcpkqks qtpprrsrsg ssqrkaksrt plrrsrsgss ppgnqksktp srqshssssp
      841 qpkmksgtpp rqgsitspqv neesatpqrr srsesspdpe vksrtpsrhs csgsspsrvk
      901 sgtpprrsrs gssspqpkvk avtspvqshs gfsspspsrm tsktpprqsr svspcsktes
      961 rllqrhshsr ssspdtkvkp gtpprqshsg stspcpkaks qtppghnlhg skspcsqeks
     1021 kdslaqscsg sfslcpgvks stppsflqqk gqsptspdsr sgtsspemrp sysespylqs
     1081 ksqtppksic srssspvael tprsptrgel saspklksgi speqrrsqsd sfsypaidsk
     1141 pllgqsrlep seskektglv lqedvsaspl rprdklsppp vqnrpesspi lrdtprtpsr
     1201 erggvgsspd tkdqssalak psqdeelmev vekpeessnq vlphlspelk emagsnvess
     1261 peierpavpl tldqsqlqas seevpamasa wsgphfspeh kelsnsppre nsfgsplefr
     1321 nsggpvaemn tgfspegkdl ngpfpnqlet dpsldvkeqs trssrhssse lspdvvekag
     1381 mssnqsvssp vldtiprtps rersssassp elkdglprtp srrsrsgssp glrdgsgtps
     1441 rhslsgsspg mkdiprtpsr grsecdsspe pkalpqtprp rsrspsspel nnkcltpqre
     1501 rsgsessveq ktvartplgq rrrsgssqel dgkpsaspqe rsesdsspds kaktrmplrq
     1561 rshsgsspev dsksrpsprr srsgsspevk ekpraapraq sgsdsspepk apaprvlprr
     1621 srsgssskgr gpspegssss esspehppks rtarrssrss pepktksrtp prrrssrssp
     1681 eltrkarlsr rsrsassspe trsrtpprrr rspsvsspep aeksrssrrr rsassprakt
     1741 asrrgrspsp kprglqrsrs rsrrektrat rrrdrsgssq stsrrrqrsr srsrvtrrrr
     1801 ggsgyhsrsp arqessrtss rrrrgrsrtp ptsrkrsrsr tspapwkrsr sraspathrr
     1861 srsrtplvsr rrsrsrtspv srrrsrsrts vtrrrsrsra spvsrrrsrs rtppvtrrrs
     1921 rsrtptrrrs rsrtppvtrr rsrsrtppvt rrrsrsrtsp itrrrsrsrt spvtrrrsrs
     1981 rtspvtrrrs rsrtspvtrr rsrsrtppai rrrsrsrtpl lprkrsrsrs plairrrsrs
     2041 rtprttrgkr sltrsppair rrsasgsssd rsrsatppat rnhsgsrtpp valnssrmgc
     2101 fsrpsmsptp ldrcrspgvl eplgssrtpm svlqqaggsm mdgpgpripd hprasvpenh
     2161 aqsrialalt aislgtarpp psmsaaglaa rmsqvpapvp lmslrtapaa slasripaas
     2221 aaamnlasar tpalpsavnl adsrtpaaaa amnlasprta vapsavnlad prtptapavn
     2281 lagartpaal aalsltgsgt aptaanypss srapqapapa nlvgprsaha tapvniassr
     2341 tppalapanl tsarmapals ganltsprvp lsayervsgr tspplldrar srtppggpgs
     2401 rtppsapsqs rvtserapsp asrmvqapsq salppaqdrp rspvpsafsd qsrsllaqtp
     2461 avagsqslss gtvakttssa gdhngmlsgp vpgvshpegg dppacagaqq pstlaalqpa
     2521 kerrssssss ssssssssss sssssssssg ssssdsegss lpaqpevalk rvpspapapk
     2581 eavregrpqe papakrkrrs ssssssssss ssssssssss ssssssssss sssssstsss
     2641 pspakpgpqa lpkpaspkka ppgerslfpv slpprhslph vargiflkph iwllpslhks
     2701 frdalwpag
//
LOCUS       XP_061008620            2705 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/arginine repetitive matrix protein 2 isoform X5 [Dama dama].
ACCESSION   XP_061008620
VERSION     XP_061008620.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152637.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2705
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2705
                     /product="serine/arginine repetitive matrix protein 2
                     isoform X5"
                     /calculated_mol_wt=293297
     Region          39..102
                     /region_name="cwf21_SRRM2"
                     /note="cwf21 domain found in serine/arginine repetitive
                     matrix protein 2; cd21375"
                     /db_xref="CDD:410601"
     Region          <317..>400
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          <2013..2445
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <2308..2705
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..2705
                     /gene="SRRM2"
                     /coded_by="XM_061152637.1:184..8301"
                     /db_xref="GeneID:133063362"
ORIGIN      
        1 myngiglptp rgsgtngyvq rnlslvrgrr gerpdykgee elrrleaalv krpnpdildh
       61 erkrrvelrc leleemmeeq gyeeqqiqek vatfrlmlle kdvnpggkee npgqrpavte
      121 thqlaelnek knerlraafg isdsyvdgss fdpqrrarea kqpapeppkp yslvressss
      181 rsptpkqkkk kkkkdrgrrs esssprrerk ksskkkkhrs eseskkrkhr sptpkskrks
      241 kdkkrkrsrs ttpapksrra hrstsadsas ssdtsrsrsr saaakthtta ltgrspspal
      301 grrgegdvpp reagtanigq psspepstkq psspcedkdk dkkeksavrp spspersntg
      361 peppaptlll aeqhggspqp lattplsqep vnppseaspa qghsppkspe kppqsssesc
      421 ppspqptkvs rhassspesp kpapapgsrr essspasksr shgrakraks hshtpsrrvg
      481 rsrsptttkr grsrsrtptk rghsrsrspq wrrsrsaqrw grsrspqrrg rsrspqrpgw
      541 srsrnaqrrg rsrsarrgrs hsrspatrgr srsrtparrg rsrsrtptrr rsrsrtparr
      601 rsrsrtparr grsrsrtpar rrsrtrspvr rrsrsrspar rsgrsrsrtp arrgrsrsrt
      661 parrsgrsrs rtptrrsgrs rsrtpnrrgr sqsrtparrg rsrsrslvrr grshsrtppr
      721 rgrsgssser knksrtsqrr srsnsspemk ksrlssrrsr slssprskak srlsvrrsls
      781 esspcpkqks qtpprrsrsg ssqrkaksrt plrrsrsgss ppgnqksktp srqshssssp
      841 qpkmksgtpp rqgsitspqv neesatpqrr srsesspdpe vksrtpsrhs csgsspsrvk
      901 sgtpprrsrs gssspqpkvk avtspvqshs gfsspspsrm tsktpprqsr svspcsktes
      961 rllqrhshsr ssspdtkvkp gtpprqshsg stspcpkaks qtppghnlhg skspcsqeks
     1021 kdslaqscsg sfslcpgvks stppsflqqk gqsptspdsr sgtsspemrp sysespylqs
     1081 ksqtppksic srssspvael tprsptrgel saspklksgi speqrrsqsd sfsypaidsk
     1141 pllgqsrlep seskektglv lqedvsaspl rprdklsppp vqnrpesspi lrdtprtpsr
     1201 erggvgsspd tkdqssalak psqdeelmev vekpeessnq vlphlspelk emagsnvess
     1261 peierpavpl tldqsqlqas seevpamasa wsgphfspeh kelsnsppre nsfgsplefr
     1321 nsggpvaemn tgfspegkdl ngpfpnqlet dpsldvkeqs trssrhssse lspdvvekag
     1381 mssnqsvssp vldtiprtps rersssassp elkdglprtp srrsrsgssp glrdgsgtps
     1441 rhslsgsspg mkdiprtpsr grsecdsspe pkalpqtprp rsrspsspel nnkcltpqre
     1501 rsgsessveq ktvartplgq rrrsgssqel dgkpsaspqe rsesdsspds kaktrmplrq
     1561 rshsgsspev dsksrpsprr srsgsspevk ekpraapraq sgsdsspepk apaprvlprr
     1621 srsgssskgr gpspegssss esspehppks rtarrssrss pepktksrtp prrrssrssp
     1681 eltrkarlsr rsrsassspe trsrtpprrr rspsvsspep aeksrssrrr rsassprakt
     1741 asrrgrspsp kprglqrsrs rsrrektrat rrrdrsgssq stsrrrqrsr srsrvtrrrr
     1801 ggsgyhsrsp arqessrtss rrrrgrsrtp ptsrkrsrsr tspapwkrsr sraspathrr
     1861 srsrtplvsr rrsrsrtspv srrrsrsrts vtrrrsrsra spvsrrrsrs rtppvtrrrs
     1921 rsrtptrrrs rsrtppvtrr rsrsrtppvt rrrsrsrtsp itrrrsrsrt spvtrrrsrs
     1981 rtspvtrrrs rsrtspvtrr rsrsrtppai rrrsrsrtpl lprkrsrsrs plairrrsrs
     2041 rtprttrgkr sltrsppair rrsasgsssd rsrsatppat rnhsgsrtpp valnssrmgc
     2101 fsrpsmsptp ldrcrspgvl eplgssrtpm svlqqaggsm mdgpgpripd hprasvpenh
     2161 aqsrialalt aislgtarpp psmsaaglaa rmsqvpapvp lmslrtapaa slasripaas
     2221 aaamnlasar tpalpsavnl adsrtpaaaa amnlasprta vapsavnlad prtptapavn
     2281 lagartpaal aalsltgsgt aptaanypss srapqapapa nlvgprsaha tapvniassr
     2341 tppalapanl tsarmapals ganltsprvp lsayervsgr tspplldrar srtppggpgs
     2401 rtppsapsqs rvtserapsp asrmvqapsq salppaqdrp rspvpsafsd qsrsllaqtp
     2461 avagsqslss gtvakttssa gdhngmlsgp vpgvshpegg dppacagaqq pstlaalqpa
     2521 kerrssssss ssssssssss sssssssssg ssssdsegss lpaqpevalk rvpspapapk
     2581 eavregrpqe papakrkrrs ssssssssss ssssssssss ssssssssss sssssstsss
     2641 pspakpgpqa lpkpaspkka ppgerssser gsrrsqrgds rspghkrrke tpsprpvrhr
     2701 ssrsp
//
LOCUS       XP_061008621            2704 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/arginine repetitive matrix protein 2 isoform X6 [Dama dama].
ACCESSION   XP_061008621
VERSION     XP_061008621.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152638.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2704
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2704
                     /product="serine/arginine repetitive matrix protein 2
                     isoform X6"
                     /calculated_mol_wt=293210
     Region          39..102
                     /region_name="cwf21_SRRM2"
                     /note="cwf21 domain found in serine/arginine repetitive
                     matrix protein 2; cd21375"
                     /db_xref="CDD:410601"
     Region          <317..>400
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          <2013..2445
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <2308..2704
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..2704
                     /gene="SRRM2"
                     /coded_by="XM_061152638.1:184..8298"
                     /db_xref="GeneID:133063362"
ORIGIN      
        1 myngiglptp rgsgtngyvq rnlslvrgrr gerpdykgee elrrleaalv krpnpdildh
       61 erkrrvelrc leleemmeeq gyeeqqiqek vatfrlmlle kdvnpggkee npgqrpavte
      121 thqlaelnek knerlraafg isdsyvdgss fdpqrrarea kqpapeppkp yslvressss
      181 rsptpkqkkk kkkkdrgrrs esssprrerk ksskkkkhrs eseskkrkhr sptpkskrks
      241 kdkkrkrsrs ttpapksrra hrstsadsas ssdtsrsrsr saaakthtta ltgrspspal
      301 grrgegdvpp reagtanigq psspepstkq psspcedkdk dkkeksavrp spspersntg
      361 peppaptlll aeqhggspqp lattplsqep vnppseaspa qghsppkspe kppqsssesc
      421 ppspqptkvs rhassspesp kpapapgsrr essspasksr shgrakraks hshtpsrrvg
      481 rsrsptttkr grsrsrtptk rghsrsrspq wrrsrsaqrw grsrspqrrg rsrspqrpgw
      541 srsrnaqrrg rsrsarrgrs hsrspatrgr srsrtparrg rsrsrtptrr rsrsrtparr
      601 rsrsrtparr grsrsrtpar rrsrtrspvr rrsrsrspar rsgrsrsrtp arrgrsrsrt
      661 parrsgrsrs rtptrrsgrs rsrtpnrrgr sqsrtparrg rsrsrslvrr grshsrtppr
      721 rgrsgssser knksrtsqrr srsnsspemk ksrlssrrsr slssprskak srlsvrrsls
      781 esspcpkqks qtpprrsrsg ssqrkaksrt plrrsrsgss ppgnqksktp srqshssssp
      841 qpkmksgtpp rqgsitspqv neesatpqrr srsesspdpe vksrtpsrhs csgsspsrvk
      901 sgtpprrsrs gssspqpkvk avtspvqshs gfsspspsrm tsktpprqsr svspcsktes
      961 rllqrhshsr ssspdtkvkp gtpprqshsg stspcpkaks qtppghnlhg skspcsqeks
     1021 kdslaqscsg sfslcpgvks stppsflqqk gqsptspdsr sgtsspemrp sysespylqs
     1081 ksqtppksic srssspvael tprsptrgel saspklksgi speqrrsqsd sfsypaidsk
     1141 pllgqsrlep seskektglv lqedvsaspl rprdklsppp vqnrpesspi lrdtprtpsr
     1201 erggvgsspd tkdqssalak psqdeelmev vekpeessnq vlphlspelk emagsnvess
     1261 peierpavpl tldqsqlqas seevpamasa wsgphfspeh kelsnsppre nsfgsplefr
     1321 nsggpvaemn tgfspegkdl ngpfpnqlet dpsldvkeqs trssrhssse lspdvvekag
     1381 mssnqsvssp vldtiprtps rersssassp elkdglprtp srrsrsgssp glrdgsgtps
     1441 rhslsgsspg mkdiprtpsr grsecdsspe pkalpqtprp rsrspsspel nnkcltpqre
     1501 rsgsessveq ktvartplgq rrrsgssqel dgkpsaspqe rsesdsspds kaktrmplrq
     1561 rshsgsspev dsksrpsprr srsgsspevk ekpraapraq sgsdsspepk apaprvlprr
     1621 srsgssskgr gpspegssss esspehppks rtarrssrss pepktksrtp prrrssrssp
     1681 eltrkarlsr rsrsassspe trsrtpprrr rspsvsspep aeksrssrrr rsassprakt
     1741 asrrgrspsp kprglqrsrs rsrrektrat rrrdrsgssq stsrrrqrsr srsrvtrrrr
     1801 ggsgyhsrsp arqessrtss rrrrgrsrtp ptsrkrsrsr tspapwkrsr sraspathrr
     1861 srsrtplvsr rrsrsrtspv srrrsrsrts vtrrrsrsra spvsrrrsrs rtppvtrrrs
     1921 rsrtptrrrs rsrtppvtrr rsrsrtppvt rrrsrsrtsp itrrrsrsrt spvtrrrsrs
     1981 rtspvtrrrs rsrtspvtrr rsrsrtppai rrrsrsrtpl lprkrsrsrs plairrrsrs
     2041 rtprttrgkr sltrsppair rrsasgsssd rsrsatppat rnhsgsrtpp valnssrmgc
     2101 fsrpsmsptp ldrcrspgvl eplgssrtpm svlqqaggsm mdgpgpripd hprasvpenh
     2161 aqsrialalt aislgtarpp psmsaaglaa rmsqvpapvp lmslrtapaa slasripaas
     2221 aaamnlasar tpalpsavnl adsrtpaaaa amnlasprta vapsavnlad prtptapavn
     2281 lagartpaal aalsltgsgt aptaanypss srapqapapa nlvgprsaha tapvniassr
     2341 tppalapanl tsarmapals ganltsprvp lsayervsgr tspplldrar srtppggpgs
     2401 rtppsapsqs rvtserapsp asrmvqapsq salppaqdrp rspvpsafsd qsrsllaqtp
     2461 avagsqslss gtvakttssa gdhngmlsgp vpgvshpegg dppacagaqq pstlaalqpa
     2521 kerrssssss ssssssssss sssssssssg ssssdsegss lpaqpevalk rvpspapapk
     2581 eavregrpqe papakrkrrs ssssssssss ssssssssss ssssssssss sssssstsss
     2641 pspakpgpqa lpkpaspkka ppgersserg srrsqrgdsr spghkrrket psprpvrhrs
     2701 srsp
//
LOCUS       XP_061008622            2674 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/arginine repetitive matrix protein 2 isoform X7 [Dama dama].
ACCESSION   XP_061008622
VERSION     XP_061008622.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152639.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2674
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2674
                     /product="serine/arginine repetitive matrix protein 2
                     isoform X7"
                     /calculated_mol_wt=289753
     Region          39..102
                     /region_name="cwf21_SRRM2"
                     /note="cwf21 domain found in serine/arginine repetitive
                     matrix protein 2; cd21375"
                     /db_xref="CDD:410601"
     Region          <317..>400
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          <2013..2445
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <2308..2662
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..2674
                     /gene="SRRM2"
                     /coded_by="XM_061152639.1:184..8208"
                     /db_xref="GeneID:133063362"
ORIGIN      
        1 myngiglptp rgsgtngyvq rnlslvrgrr gerpdykgee elrrleaalv krpnpdildh
       61 erkrrvelrc leleemmeeq gyeeqqiqek vatfrlmlle kdvnpggkee npgqrpavte
      121 thqlaelnek knerlraafg isdsyvdgss fdpqrrarea kqpapeppkp yslvressss
      181 rsptpkqkkk kkkkdrgrrs esssprrerk ksskkkkhrs eseskkrkhr sptpkskrks
      241 kdkkrkrsrs ttpapksrra hrstsadsas ssdtsrsrsr saaakthtta ltgrspspal
      301 grrgegdvpp reagtanigq psspepstkq psspcedkdk dkkeksavrp spspersntg
      361 peppaptlll aeqhggspqp lattplsqep vnppseaspa qghsppkspe kppqsssesc
      421 ppspqptkvs rhassspesp kpapapgsrr essspasksr shgrakraks hshtpsrrvg
      481 rsrsptttkr grsrsrtptk rghsrsrspq wrrsrsaqrw grsrspqrrg rsrspqrpgw
      541 srsrnaqrrg rsrsarrgrs hsrspatrgr srsrtparrg rsrsrtptrr rsrsrtparr
      601 rsrsrtparr grsrsrtpar rrsrtrspvr rrsrsrspar rsgrsrsrtp arrgrsrsrt
      661 parrsgrsrs rtptrrsgrs rsrtpnrrgr sqsrtparrg rsrsrslvrr grshsrtppr
      721 rgrsgssser knksrtsqrr srsnsspemk ksrlssrrsr slssprskak srlsvrrsls
      781 esspcpkqks qtpprrsrsg ssqrkaksrt plrrsrsgss ppgnqksktp srqshssssp
      841 qpkmksgtpp rqgsitspqv neesatpqrr srsesspdpe vksrtpsrhs csgsspsrvk
      901 sgtpprrsrs gssspqpkvk avtspvqshs gfsspspsrm tsktpprqsr svspcsktes
      961 rllqrhshsr ssspdtkvkp gtpprqshsg stspcpkaks qtppghnlhg skspcsqeks
     1021 kdslaqscsg sfslcpgvks stppsflqqk gqsptspdsr sgtsspemrp sysespylqs
     1081 ksqtppksic srssspvael tprsptrgel saspklksgi speqrrsqsd sfsypaidsk
     1141 pllgqsrlep seskektglv lqedvsaspl rprdklsppp vqnrpesspi lrdtprtpsr
     1201 erggvgsspd tkdqssalak psqdeelmev vekpeessnq vlphlspelk emagsnvess
     1261 peierpavpl tldqsqlqas seevpamasa wsgphfspeh kelsnsppre nsfgsplefr
     1321 nsggpvaemn tgfspegkdl ngpfpnqlet dpsldvkeqs trssrhssse lspdvvekag
     1381 mssnqsvssp vldtiprtps rersssassp elkdglprtp srrsrsgssp glrdgsgtps
     1441 rhslsgsspg mkdiprtpsr grsecdsspe pkalpqtprp rsrspsspel nnkcltpqre
     1501 rsgsessveq ktvartplgq rrrsgssqel dgkpsaspqe rsesdsspds kaktrmplrq
     1561 rshsgsspev dsksrpsprr srsgsspevk ekpraapraq sgsdsspepk apaprvlprr
     1621 srsgssskgr gpspegssss esspehppks rtarrssrss pepktksrtp prrrssrssp
     1681 eltrkarlsr rsrsassspe trsrtpprrr rspsvsspep aeksrssrrr rsassprakt
     1741 asrrgrspsp kprglqrsrs rsrrektrat rrrdrsgssq stsrrrqrsr srsrvtrrrr
     1801 ggsgyhsrsp arqessrtss rrrrgrsrtp ptsrkrsrsr tspapwkrsr sraspathrr
     1861 srsrtplvsr rrsrsrtspv srrrsrsrts vtrrrsrsra spvsrrrsrs rtppvtrrrs
     1921 rsrtptrrrs rsrtppvtrr rsrsrtppvt rrrsrsrtsp itrrrsrsrt spvtrrrsrs
     1981 rtspvtrrrs rsrtspvtrr rsrsrtppai rrrsrsrtpl lprkrsrsrs plairrrsrs
     2041 rtprttrgkr sltrsppair rrsasgsssd rsrsatppat rnhsgsrtpp valnssrmgc
     2101 fsrpsmsptp ldrcrspgvl eplgssrtpm svlqqaggsm mdgpgpripd hprasvpenh
     2161 aqsrialalt aislgtarpp psmsaaglaa rmsqvpapvp lmslrtapaa slasripaas
     2221 aaamnlasar tpalpsavnl adsrtpaaaa amnlasprta vapsavnlad prtptapavn
     2281 lagartpaal aalsltgsgt aptaanypss srapqapapa nlvgprsaha tapvniassr
     2341 tppalapanl tsarmapals ganltsprvp lsayervsgr tspplldrar srtppggpgs
     2401 rtppsapsqs rvtserapsp asrmvqapsq salppaqdrp rspvpsafsd qsrsllaqtp
     2461 avagsqslss gtvakttssa gdhngmlsgp vpgvshpegg dppacagaqq pstlaalqpa
     2521 kerrssssss ssssssssss sssssssssg ssssdsegss lpaqpevalk rvpspapapk
     2581 eavregrpqe papakrkrrs ssssssssss ssssssssss ssssssssss sssssstsss
     2641 pspakpgpqa lpkpaspkka ppgershtqq rlav
//
LOCUS       XP_061008623            2664 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/arginine repetitive matrix protein 2 isoform X8 [Dama dama].
ACCESSION   XP_061008623
VERSION     XP_061008623.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152640.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2664
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2664
                     /product="serine/arginine repetitive matrix protein 2
                     isoform X8"
                     /calculated_mol_wt=288596
     Region          <3..23
                     /region_name="cwf21"
                     /note="cwf21 domain; cl40451"
                     /db_xref="CDD:424082"
     Region          <238..>321
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          <1934..2366
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <2229..2664
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..2664
                     /gene="SRRM2"
                     /coded_by="XM_061152640.1:16..8010"
                     /db_xref="GeneID:133063362"
ORIGIN      
        1 mryeeqqiqe kvatfrlmll ekdvnpggke enpgqrpavt ethqlaelne kknerlraaf
       61 gisdsyvdgs sfdpqrrare akqpapeppk pyslvresss srsptpkqkk kkkkkdrgrr
      121 sesssprrer kksskkkkhr seseskkrkh rsptpkskrk skdkkrkrsr sttpapksrr
      181 ahrstsadsa sssdtsrsrs rsaaakthtt altgrspspa lgrrgegdvp preagtanig
      241 qpsspepstk qpsspcedkd kdkkeksavr pspspersnt gpeppaptll laeqhggspq
      301 plattplsqe pvnppseasp aqghsppksp ekppqssses cppspqptkv srhassspes
      361 pkpapapgsr ressspasks rshgrakrak shshtpsrrv grsrsptttk rgrsrsrtpt
      421 krghsrsrsp qwrrsrsaqr wgrsrspqrr grsrspqrpg wsrsrnaqrr grsrsarrgr
      481 shsrspatrg rsrsrtparr grsrsrtptr rrsrsrtpar rrsrsrtpar rgrsrsrtpa
      541 rrrsrtrspv rrrsrsrspa rrsgrsrsrt parrgrsrsr tparrsgrsr srtptrrsgr
      601 srsrtpnrrg rsqsrtparr grsrsrslvr rgrshsrtpp rrgrsgssse rknksrtsqr
      661 rsrsnsspem kksrlssrrs rslssprska ksrlsvrrsl sesspcpkqk sqtpprrsrs
      721 gssqrkaksr tplrrsrsgs sppgnqkskt psrqshssss pqpkmksgtp prqgsitspq
      781 vneesatpqr rsrsesspdp evksrtpsrh scsgsspsrv ksgtpprrsr sgssspqpkv
      841 kavtspvqsh sgfsspspsr mtsktpprqs rsvspcskte srllqrhshs rssspdtkvk
      901 pgtpprqshs gstspcpkak sqtppghnlh gskspcsqek skdslaqscs gsfslcpgvk
      961 sstppsflqq kgqsptspds rsgtsspemr psysespylq sksqtppksi csrssspvae
     1021 ltprsptrge lsaspklksg ispeqrrsqs dsfsypaids kpllgqsrle pseskektgl
     1081 vlqedvsasp lrprdklspp pvqnrpessp ilrdtprtps rerggvgssp dtkdqssala
     1141 kpsqdeelme vvekpeessn qvlphlspel kemagsnves speierpavp ltldqsqlqa
     1201 sseevpamas awsgphfspe hkelsnsppr ensfgsplef rnsggpvaem ntgfspegkd
     1261 lngpfpnqle tdpsldvkeq strssrhsss elspdvveka gmssnqsvss pvldtiprtp
     1321 srersssass pelkdglprt psrrsrsgss pglrdgsgtp srhslsgssp gmkdiprtps
     1381 rgrsecdssp epkalpqtpr prsrspsspe lnnkcltpqr ersgsessve qktvartplg
     1441 qrrrsgssqe ldgkpsaspq ersesdsspd skaktrmplr qrshsgsspe vdsksrpspr
     1501 rsrsgsspev kekpraapra qsgsdsspep kapaprvlpr rsrsgssskg rgpspegsss
     1561 sesspehppk srtarrssrs spepktksrt pprrrssrss peltrkarls rrsrsasssp
     1621 etrsrtpprr rrspsvsspe paeksrssrr rrsassprak tasrrgrsps pkprglqrsr
     1681 srsrrektra trrrdrsgss qstsrrrqrs rsrsrvtrrr rggsgyhsrs parqessrts
     1741 srrrrgrsrt pptsrkrsrs rtspapwkrs rsraspathr rsrsrtplvs rrrsrsrtsp
     1801 vsrrrsrsrt svtrrrsrsr aspvsrrrsr srtppvtrrr srsrtptrrr srsrtppvtr
     1861 rrsrsrtppv trrrsrsrts pitrrrsrsr tspvtrrrsr srtspvtrrr srsrtspvtr
     1921 rrsrsrtppa irrrsrsrtp llprkrsrsr splairrrsr srtprttrgk rsltrsppai
     1981 rrrsasgsss drsrsatppa trnhsgsrtp pvalnssrmg cfsrpsmspt pldrcrspgv
     2041 leplgssrtp msvlqqaggs mmdgpgprip dhprasvpen haqsrialal taislgtarp
     2101 ppsmsaagla armsqvpapv plmslrtapa aslasripaa saaamnlasa rtpalpsavn
     2161 ladsrtpaaa aamnlasprt avapsavnla dprtptapav nlagartpaa laalsltgsg
     2221 taptaanyps ssrapqapap anlvgprsah atapvniass rtppalapan ltsarmapal
     2281 sganltsprv plsayervsg rtspplldra rsrtppggpg srtppsapsq srvtseraps
     2341 pasrmvqaps qsalppaqdr prspvpsafs dqsrsllaqt pavagsqsls sgtvakttss
     2401 agdhngmlsg pvpgvshpeg gdppacagaq qpstlaalqp akerrsssss ssssssssss
     2461 ssssssssss gssssdsegs slpaqpeval krvpspapap keavregrpq epapakrkrr
     2521 ssssssssss ssssssssss ssssssssss ssssssstss spspakpgpq alpkpaspkk
     2581 appgerrsrs prkpidslrd srslsyspae rrrpspqpsp rdqqssserg srrsqrgdsr
     2641 spghkrrket psprpvrhrs srsp
//
LOCUS       XP_061008624            2647 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/arginine repetitive matrix protein 2 isoform X9 [Dama dama].
ACCESSION   XP_061008624
VERSION     XP_061008624.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152641.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2647
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2647
                     /product="serine/arginine repetitive matrix protein 2
                     isoform X9"
                     /calculated_mol_wt=286445
     Region          <221..>304
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          <1917..2349
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <2212..2647
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..2647
                     /gene="SRRM2"
                     /coded_by="XM_061152641.1:200..8143"
                     /db_xref="GeneID:133063362"
ORIGIN      
        1 mllekdvnpg gkeenpgqrp avtethqlae lnekknerlr aafgisdsyv dgssfdpqrr
       61 areakqpape ppkpyslvre ssssrsptpk qkkkkkkkdr grrsessspr rerkksskkk
      121 khrseseskk rkhrsptpks krkskdkkrk rsrsttpapk srrahrstsa dsasssdtsr
      181 srsrsaaakt httaltgrsp spalgrrgeg dvppreagta nigqpsspep stkqpsspce
      241 dkdkdkkeks avrpspsper sntgpeppap tlllaeqhgg spqplattpl sqepvnppse
      301 aspaqghspp kspekppqss sescppspqp tkvsrhasss pespkpapap gsrressspa
      361 sksrshgrak rakshshtps rrvgrsrspt ttkrgrsrsr tptkrghsrs rspqwrrsrs
      421 aqrwgrsrsp qrrgrsrspq rpgwsrsrna qrrgrsrsar rgrshsrspa trgrsrsrtp
      481 arrgrsrsrt ptrrrsrsrt parrrsrsrt parrgrsrsr tparrrsrtr spvrrrsrsr
      541 sparrsgrsr srtparrgrs rsrtparrsg rsrsrtptrr sgrsrsrtpn rrgrsqsrtp
      601 arrgrsrsrs lvrrgrshsr tpprrgrsgs sserknksrt sqrrsrsnss pemkksrlss
      661 rrsrslsspr skaksrlsvr rslsesspcp kqksqtpprr srsgssqrka ksrtplrrsr
      721 sgssppgnqk sktpsrqshs ssspqpkmks gtpprqgsit spqvneesat pqrrsrsess
      781 pdpevksrtp srhscsgssp srvksgtppr rsrsgssspq pkvkavtspv qshsgfssps
      841 psrmtsktpp rqsrsvspcs ktesrllqrh shsrssspdt kvkpgtpprq shsgstspcp
      901 kaksqtppgh nlhgskspcs qekskdslaq scsgsfslcp gvksstppsf lqqkgqspts
      961 pdsrsgtssp emrpsysesp ylqsksqtpp ksicsrsssp vaeltprspt rgelsaspkl
     1021 ksgispeqrr sqsdsfsypa idskpllgqs rlepseskek tglvlqedvs asplrprdkl
     1081 spppvqnrpe sspilrdtpr tpsrerggvg sspdtkdqss alakpsqdee lmevvekpee
     1141 ssnqvlphls pelkemagsn vesspeierp avpltldqsq lqasseevpa masawsgphf
     1201 spehkelsns pprensfgsp lefrnsggpv aemntgfspe gkdlngpfpn qletdpsldv
     1261 keqstrssrh ssselspdvv ekagmssnqs vsspvldtip rtpsrersss asspelkdgl
     1321 prtpsrrsrs gsspglrdgs gtpsrhslsg sspgmkdipr tpsrgrsecd sspepkalpq
     1381 tprprsrsps spelnnkclt pqrersgses sveqktvart plgqrrrsgs sqeldgkpsa
     1441 spqersesds spdskaktrm plrqrshsgs spevdsksrp sprrsrsgss pevkekpraa
     1501 praqsgsdss pepkapaprv lprrsrsgss skgrgpspeg ssssesspeh ppksrtarrs
     1561 srsspepktk srtpprrrss rsspeltrka rlsrrsrsas sspetrsrtp prrrrspsvs
     1621 spepaeksrs srrrrsassp raktasrrgr spspkprglq rsrsrsrrek tratrrrdrs
     1681 gssqstsrrr qrsrsrsrvt rrrrggsgyh srsparqess rtssrrrrgr srtpptsrkr
     1741 srsrtspapw krsrsraspa thrrsrsrtp lvsrrrsrsr tspvsrrrsr srtsvtrrrs
     1801 rsraspvsrr rsrsrtppvt rrrsrsrtpt rrrsrsrtpp vtrrrsrsrt ppvtrrrsrs
     1861 rtspitrrrs rsrtspvtrr rsrsrtspvt rrrsrsrtsp vtrrrsrsrt ppairrrsrs
     1921 rtpllprkrs rsrsplairr rsrsrtprtt rgkrsltrsp pairrrsasg sssdrsrsat
     1981 ppatrnhsgs rtppvalnss rmgcfsrpsm sptpldrcrs pgvleplgss rtpmsvlqqa
     2041 ggsmmdgpgp ripdhprasv penhaqsria laltaislgt arpppsmsaa glaarmsqvp
     2101 apvplmslrt apaaslasri paasaaamnl asartpalps avnladsrtp aaaaamnlas
     2161 prtavapsav nladprtpta pavnlagart paalaalslt gsgtaptaan ypsssrapqa
     2221 papanlvgpr sahatapvni assrtppala panltsarma palsganlts prvplsayer
     2281 vsgrtsppll drarsrtppg gpgsrtppsa psqsrvtser apspasrmvq apsqsalppa
     2341 qdrprspvps afsdqsrsll aqtpavagsq slssgtvakt tssagdhngm lsgpvpgvsh
     2401 peggdppaca gaqqpstlaa lqpakerrss ssssssssss ssssssssss sssgssssds
     2461 egsslpaqpe valkrvpspa papkeavreg rpqepapakr krrsssssss ssssssssss
     2521 ssssssssss ssssssssss tssspspakp gpqalpkpas pkkappgerr srsprkpids
     2581 lrdsrslsys paerrrpspq psprdqqsss ergsrrsqrg dsrspghkrr ketpsprpvr
     2641 hrssrsp
//
LOCUS       XP_061008626            2647 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/arginine repetitive matrix protein 2 isoform X9 [Dama dama].
ACCESSION   XP_061008626
VERSION     XP_061008626.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152643.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2647
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2647
                     /product="serine/arginine repetitive matrix protein 2
                     isoform X9"
                     /calculated_mol_wt=286445
     Region          <221..>304
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          <1917..2349
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <2212..2647
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..2647
                     /gene="SRRM2"
                     /coded_by="XM_061152643.1:221..8164"
                     /db_xref="GeneID:133063362"
ORIGIN      
        1 mllekdvnpg gkeenpgqrp avtethqlae lnekknerlr aafgisdsyv dgssfdpqrr
       61 areakqpape ppkpyslvre ssssrsptpk qkkkkkkkdr grrsessspr rerkksskkk
      121 khrseseskk rkhrsptpks krkskdkkrk rsrsttpapk srrahrstsa dsasssdtsr
      181 srsrsaaakt httaltgrsp spalgrrgeg dvppreagta nigqpsspep stkqpsspce
      241 dkdkdkkeks avrpspsper sntgpeppap tlllaeqhgg spqplattpl sqepvnppse
      301 aspaqghspp kspekppqss sescppspqp tkvsrhasss pespkpapap gsrressspa
      361 sksrshgrak rakshshtps rrvgrsrspt ttkrgrsrsr tptkrghsrs rspqwrrsrs
      421 aqrwgrsrsp qrrgrsrspq rpgwsrsrna qrrgrsrsar rgrshsrspa trgrsrsrtp
      481 arrgrsrsrt ptrrrsrsrt parrrsrsrt parrgrsrsr tparrrsrtr spvrrrsrsr
      541 sparrsgrsr srtparrgrs rsrtparrsg rsrsrtptrr sgrsrsrtpn rrgrsqsrtp
      601 arrgrsrsrs lvrrgrshsr tpprrgrsgs sserknksrt sqrrsrsnss pemkksrlss
      661 rrsrslsspr skaksrlsvr rslsesspcp kqksqtpprr srsgssqrka ksrtplrrsr
      721 sgssppgnqk sktpsrqshs ssspqpkmks gtpprqgsit spqvneesat pqrrsrsess
      781 pdpevksrtp srhscsgssp srvksgtppr rsrsgssspq pkvkavtspv qshsgfssps
      841 psrmtsktpp rqsrsvspcs ktesrllqrh shsrssspdt kvkpgtpprq shsgstspcp
      901 kaksqtppgh nlhgskspcs qekskdslaq scsgsfslcp gvksstppsf lqqkgqspts
      961 pdsrsgtssp emrpsysesp ylqsksqtpp ksicsrsssp vaeltprspt rgelsaspkl
     1021 ksgispeqrr sqsdsfsypa idskpllgqs rlepseskek tglvlqedvs asplrprdkl
     1081 spppvqnrpe sspilrdtpr tpsrerggvg sspdtkdqss alakpsqdee lmevvekpee
     1141 ssnqvlphls pelkemagsn vesspeierp avpltldqsq lqasseevpa masawsgphf
     1201 spehkelsns pprensfgsp lefrnsggpv aemntgfspe gkdlngpfpn qletdpsldv
     1261 keqstrssrh ssselspdvv ekagmssnqs vsspvldtip rtpsrersss asspelkdgl
     1321 prtpsrrsrs gsspglrdgs gtpsrhslsg sspgmkdipr tpsrgrsecd sspepkalpq
     1381 tprprsrsps spelnnkclt pqrersgses sveqktvart plgqrrrsgs sqeldgkpsa
     1441 spqersesds spdskaktrm plrqrshsgs spevdsksrp sprrsrsgss pevkekpraa
     1501 praqsgsdss pepkapaprv lprrsrsgss skgrgpspeg ssssesspeh ppksrtarrs
     1561 srsspepktk srtpprrrss rsspeltrka rlsrrsrsas sspetrsrtp prrrrspsvs
     1621 spepaeksrs srrrrsassp raktasrrgr spspkprglq rsrsrsrrek tratrrrdrs
     1681 gssqstsrrr qrsrsrsrvt rrrrggsgyh srsparqess rtssrrrrgr srtpptsrkr
     1741 srsrtspapw krsrsraspa thrrsrsrtp lvsrrrsrsr tspvsrrrsr srtsvtrrrs
     1801 rsraspvsrr rsrsrtppvt rrrsrsrtpt rrrsrsrtpp vtrrrsrsrt ppvtrrrsrs
     1861 rtspitrrrs rsrtspvtrr rsrsrtspvt rrrsrsrtsp vtrrrsrsrt ppairrrsrs
     1921 rtpllprkrs rsrsplairr rsrsrtprtt rgkrsltrsp pairrrsasg sssdrsrsat
     1981 ppatrnhsgs rtppvalnss rmgcfsrpsm sptpldrcrs pgvleplgss rtpmsvlqqa
     2041 ggsmmdgpgp ripdhprasv penhaqsria laltaislgt arpppsmsaa glaarmsqvp
     2101 apvplmslrt apaaslasri paasaaamnl asartpalps avnladsrtp aaaaamnlas
     2161 prtavapsav nladprtpta pavnlagart paalaalslt gsgtaptaan ypsssrapqa
     2221 papanlvgpr sahatapvni assrtppala panltsarma palsganlts prvplsayer
     2281 vsgrtsppll drarsrtppg gpgsrtppsa psqsrvtser apspasrmvq apsqsalppa
     2341 qdrprspvps afsdqsrsll aqtpavagsq slssgtvakt tssagdhngm lsgpvpgvsh
     2401 peggdppaca gaqqpstlaa lqpakerrss ssssssssss ssssssssss sssgssssds
     2461 egsslpaqpe valkrvpspa papkeavreg rpqepapakr krrsssssss ssssssssss
     2521 ssssssssss ssssssssss tssspspakp gpqalpkpas pkkappgerr srsprkpids
     2581 lrdsrslsys paerrrpspq psprdqqsss ergsrrsqrg dsrspghkrr ketpsprpvr
     2641 hrssrsp
//
LOCUS       XP_061008627            2574 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/arginine repetitive matrix protein 2 isoform X10 [Dama
            dama].
ACCESSION   XP_061008627
VERSION     XP_061008627.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152644.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2574
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2574
                     /product="serine/arginine repetitive matrix protein 2
                     isoform X10"
                     /calculated_mol_wt=279902
     Region          39..102
                     /region_name="cwf21_SRRM2"
                     /note="cwf21 domain found in serine/arginine repetitive
                     matrix protein 2; cd21375"
                     /db_xref="CDD:410601"
     Region          <317..>400
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          <2013..2445
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..2574
                     /gene="SRRM2"
                     /coded_by="XM_061152644.1:184..7908"
                     /db_xref="GeneID:133063362"
ORIGIN      
        1 myngiglptp rgsgtngyvq rnlslvrgrr gerpdykgee elrrleaalv krpnpdildh
       61 erkrrvelrc leleemmeeq gyeeqqiqek vatfrlmlle kdvnpggkee npgqrpavte
      121 thqlaelnek knerlraafg isdsyvdgss fdpqrrarea kqpapeppkp yslvressss
      181 rsptpkqkkk kkkkdrgrrs esssprrerk ksskkkkhrs eseskkrkhr sptpkskrks
      241 kdkkrkrsrs ttpapksrra hrstsadsas ssdtsrsrsr saaakthtta ltgrspspal
      301 grrgegdvpp reagtanigq psspepstkq psspcedkdk dkkeksavrp spspersntg
      361 peppaptlll aeqhggspqp lattplsqep vnppseaspa qghsppkspe kppqsssesc
      421 ppspqptkvs rhassspesp kpapapgsrr essspasksr shgrakraks hshtpsrrvg
      481 rsrsptttkr grsrsrtptk rghsrsrspq wrrsrsaqrw grsrspqrrg rsrspqrpgw
      541 srsrnaqrrg rsrsarrgrs hsrspatrgr srsrtparrg rsrsrtptrr rsrsrtparr
      601 rsrsrtparr grsrsrtpar rrsrtrspvr rrsrsrspar rsgrsrsrtp arrgrsrsrt
      661 parrsgrsrs rtptrrsgrs rsrtpnrrgr sqsrtparrg rsrsrslvrr grshsrtppr
      721 rgrsgssser knksrtsqrr srsnsspemk ksrlssrrsr slssprskak srlsvrrsls
      781 esspcpkqks qtpprrsrsg ssqrkaksrt plrrsrsgss ppgnqksktp srqshssssp
      841 qpkmksgtpp rqgsitspqv neesatpqrr srsesspdpe vksrtpsrhs csgsspsrvk
      901 sgtpprrsrs gssspqpkvk avtspvqshs gfsspspsrm tsktpprqsr svspcsktes
      961 rllqrhshsr ssspdtkvkp gtpprqshsg stspcpkaks qtppghnlhg skspcsqeks
     1021 kdslaqscsg sfslcpgvks stppsflqqk gqsptspdsr sgtsspemrp sysespylqs
     1081 ksqtppksic srssspvael tprsptrgel saspklksgi speqrrsqsd sfsypaidsk
     1141 pllgqsrlep seskektglv lqedvsaspl rprdklsppp vqnrpesspi lrdtprtpsr
     1201 erggvgsspd tkdqssalak psqdeelmev vekpeessnq vlphlspelk emagsnvess
     1261 peierpavpl tldqsqlqas seevpamasa wsgphfspeh kelsnsppre nsfgsplefr
     1321 nsggpvaemn tgfspegkdl ngpfpnqlet dpsldvkeqs trssrhssse lspdvvekag
     1381 mssnqsvssp vldtiprtps rersssassp elkdglprtp srrsrsgssp glrdgsgtps
     1441 rhslsgsspg mkdiprtpsr grsecdsspe pkalpqtprp rsrspsspel nnkcltpqre
     1501 rsgsessveq ktvartplgq rrrsgssqel dgkpsaspqe rsesdsspds kaktrmplrq
     1561 rshsgsspev dsksrpsprr srsgsspevk ekpraapraq sgsdsspepk apaprvlprr
     1621 srsgssskgr gpspegssss esspehppks rtarrssrss pepktksrtp prrrssrssp
     1681 eltrkarlsr rsrsassspe trsrtpprrr rspsvsspep aeksrssrrr rsassprakt
     1741 asrrgrspsp kprglqrsrs rsrrektrat rrrdrsgssq stsrrrqrsr srsrvtrrrr
     1801 ggsgyhsrsp arqessrtss rrrrgrsrtp ptsrkrsrsr tspapwkrsr sraspathrr
     1861 srsrtplvsr rrsrsrtspv srrrsrsrts vtrrrsrsra spvsrrrsrs rtppvtrrrs
     1921 rsrtptrrrs rsrtppvtrr rsrsrtppvt rrrsrsrtsp itrrrsrsrt spvtrrrsrs
     1981 rtspvtrrrs rsrtspvtrr rsrsrtppai rrrsrsrtpl lprkrsrsrs plairrrsrs
     2041 rtprttrgkr sltrsppair rrsasgsssd rsrsatppat rnhsgsrtpp valnssrmgc
     2101 fsrpsmsptp ldrcrspgvl eplgssrtpm svlqqaggsm mdgpgpripd hprasvpenh
     2161 aqsrialalt aislgtarpp psmsaaglaa rmsqvpapvp lmslrtapaa slasripaas
     2221 aaamnlasar tpalpsavnl adsrtpaaaa amnlasprta vapsavnlad prtptapavn
     2281 lagartpaal aalsltgsgt aptaanypss srapqapapa nlvgprsaha tapvniassr
     2341 tppalapanl tsarmapals ganltsprvp lsayervsgr tspplldrar srtppggpgs
     2401 rtppsapsqs rvtserapsp asrmvqapsq salppaqdrp rspvpsafsd qsrsllaqtp
     2461 avagsqslss gtvakttssa gdhngmlsgp vpgvshpegg dppacagaqq pstlaalqpa
     2521 kerrssssss ssssssssss sssssssssg ssssdsegss lpaqpevalk rgqn
//
LOCUS       XP_061008628             291 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/arginine repetitive matrix protein 2 isoform X11 [Dama
            dama].
ACCESSION   XP_061008628
VERSION     XP_061008628.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152645.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..291
                     /product="serine/arginine repetitive matrix protein 2
                     isoform X11"
                     /calculated_mol_wt=33304
     Region          39..102
                     /region_name="cwf21_SRRM2"
                     /note="cwf21 domain found in serine/arginine repetitive
                     matrix protein 2; cd21375"
                     /db_xref="CDD:410601"
     CDS             1..291
                     /gene="SRRM2"
                     /coded_by="XM_061152645.1:198..1073"
                     /db_xref="GeneID:133063362"
ORIGIN      
        1 myngiglptp rgsgtngyvq rnlslvrgrr gerpdykgee elrrleaalv krpnpdildh
       61 erkrrvelrc leleemmeeq gyeeqqiqek vatfrlmlle kdvnpggkee npgqrpavte
      121 thqlaelnek knerlraafg isdsyvdgss fdpqrrarea kqpapeppkp yslvressss
      181 rsptpkqkkk kkkkdrgrrs esssprrerk ksskkkkhrs eseskkrkhr sptpkskrks
      241 kdkkrkrsrs ttpapksrra hrstsadsas ssdtsrsrrc tdhsedtvpa l
//
LOCUS       XP_061008629             118 aa            linear   MAM 02-DEC-2023
DEFINITION  elongin-B [Dama dama].
ACCESSION   XP_061008629
VERSION     XP_061008629.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152646.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..118
                     /product="elongin-B"
                     /calculated_mol_wt=13039
     Region          2..102
                     /region_name="Ubl_ElonginB"
                     /note="ubiquitin-like (Ubl) domain found in transcription
                     elongation factor B (Elongin B) and similar proteins;
                     cd01788"
                     /db_xref="CDD:340486"
     Site            order(4,6,8,11..17,34,43,45,47..49,59,61,66,68..74,80,
                     85..86,88,91..99)
                     /site_type="other"
                     /note="elongin C interaction site [polypeptide binding]"
                     /db_xref="CDD:340486"
     Site            order(4,6,8,11..17,34,43,45,47..49,59,61,66,68..74,80,
                     85..86,88,91..99)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:340486"
     CDS             1..118
                     /gene="ELOB"
                     /coded_by="XM_061152646.1:66..422"
                     /db_xref="GeneID:133063363"
ORIGIN      
        1 mdvflmirrh kttiftdake sstvfelkri vegilkrppd eqrlykddql lddgktlgec
       61 gftsqtarpq apatvglafr adeafealri epfssppelp dvmkpqdsgs saneqavq
//
LOCUS       XP_061008630             144 aa            linear   MAM 02-DEC-2023
DEFINITION  FLYWCH family member 2 [Dama dama].
ACCESSION   XP_061008630
VERSION     XP_061008630.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152647.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..144
                     /product="FLYWCH family member 2"
                     /calculated_mol_wt=14862
     Region          1..109
                     /region_name="FLYWCH_N"
                     /note="FLYWCH-type zinc finger-containing protein;
                     pfam15423"
                     /db_xref="CDD:405997"
     CDS             1..144
                     /gene="FLYWCH2"
                     /coded_by="XM_061152647.1:294..728"
                     /db_xref="GeneID:133063365"
ORIGIN      
        1 mplpepseqe sesvkagqep speppepgtd vvpaapkkpr kfsklvllta skdsakvega
       61 krkgvhcims lgvpgpatla kallkihpea qraieaapqe peqkrskldt dgkedgslag
      121 ppapspsvdg eestsgpvep reap
//
LOCUS       XP_061008631             144 aa            linear   MAM 02-DEC-2023
DEFINITION  FLYWCH family member 2 [Dama dama].
ACCESSION   XP_061008631
VERSION     XP_061008631.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152648.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..144
                     /product="FLYWCH family member 2"
                     /calculated_mol_wt=14862
     Region          1..109
                     /region_name="FLYWCH_N"
                     /note="FLYWCH-type zinc finger-containing protein;
                     pfam15423"
                     /db_xref="CDD:405997"
     CDS             1..144
                     /gene="FLYWCH2"
                     /coded_by="XM_061152648.1:183..617"
                     /db_xref="GeneID:133063365"
ORIGIN      
        1 mplpepseqe sesvkagqep speppepgtd vvpaapkkpr kfsklvllta skdsakvega
       61 krkgvhcims lgvpgpatla kallkihpea qraieaapqe peqkrskldt dgkedgslag
      121 ppapspsvdg eestsgpvep reap
//
LOCUS       XP_061008632             716 aa            linear   MAM 02-DEC-2023
DEFINITION  FLYWCH-type zinc finger-containing protein 1 isoform X1 [Dama
            dama].
ACCESSION   XP_061008632
VERSION     XP_061008632.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152649.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..716
                     /product="FLYWCH-type zinc finger-containing protein 1
                     isoform X1"
                     /calculated_mol_wt=79537
     Region          1..110
                     /region_name="FLYWCH_N"
                     /note="FLYWCH-type zinc finger-containing protein;
                     pfam15423"
                     /db_xref="CDD:405997"
     Region          118..176
                     /region_name="FLYWCH"
                     /note="FLYWCH zinc finger domain; pfam04500"
                     /db_xref="CDD:461332"
     Region          272..330
                     /region_name="FLYWCH"
                     /note="FLYWCH zinc finger domain; pfam04500"
                     /db_xref="CDD:461332"
     Region          331..391
                     /region_name="FLYWCH_u"
                     /note="FLYWCH-type zinc finger-containing protein 1;
                     pfam16662"
                     /db_xref="CDD:406949"
     Region          417..475
                     /region_name="FLYWCH"
                     /note="FLYWCH zinc finger domain; pfam04500"
                     /db_xref="CDD:461332"
     Region          505..563
                     /region_name="FLYWCH"
                     /note="FLYWCH zinc finger domain; pfam04500"
                     /db_xref="CDD:461332"
     Region          596..654
                     /region_name="FLYWCH"
                     /note="FLYWCH zinc finger domain; pfam04500"
                     /db_xref="CDD:461332"
     CDS             1..716
                     /gene="FLYWCH1"
                     /coded_by="XM_061152649.1:447..2597"
                     /db_xref="GeneID:133063366"
ORIGIN      
        1 mplpepseqe gesvkagqep speppepgtd vvleaptkpm efselvllaa stesgdgvdp
       61 qseevhcvlt lemadpdtla gtpqilpvee qrgvvqprpq tqalkpskpn ivtqpleflr
      121 tpfggrllvl esflykqeka vgdkvywkcr eraelgcrar aitrgprati mrghchppde
      181 eglearrqrq klpcpalpeg lagsqgpgsr veeplegagp wlcpvepept pgpllsnpal
      241 eedeglrala llrlppkkrs tlgsrgpppl eflrtcyggs flvhqsflyk rekavgdkvy
      301 wtcrdhtqhg crsraitqgh rvtvmrghch apdveglkar rqqeramaal raqpggpggp
      361 edkplqgvds llyrrgpgpl tltrprprkr ptandkdlpa epqgeedkde dpggpeflrt
      421 plggsflvye sflyrrekaa gekvywtcrd qarmgcrsra itqgrrvtvm rghchppdlg
      481 glealrqrek rpgtaqrgsp ggpeflrtpl ggsflvyesf lyrrekaage kvywtcrdqa
      541 rmgcrsrait qgprvmvmrr hchppdlggl ealrqreqlp spaqregsea pqpleflrts
      601 lggrflvyes flyrkekaag ekvywmcrdq arkgcrsrai tqgpqvtimr shchppdlag
      661 lealrqrerl pspaqqedpe kvkllpevql cfetcapecq qsygkvesiq lnsesq
//
LOCUS       XP_061008634             715 aa            linear   MAM 02-DEC-2023
DEFINITION  FLYWCH-type zinc finger-containing protein 1 isoform X2 [Dama
            dama].
ACCESSION   XP_061008634
VERSION     XP_061008634.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152651.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..715
                     /product="FLYWCH-type zinc finger-containing protein 1
                     isoform X2"
                     /calculated_mol_wt=79408
     Region          1..110
                     /region_name="FLYWCH_N"
                     /note="FLYWCH-type zinc finger-containing protein;
                     pfam15423"
                     /db_xref="CDD:405997"
     Region          118..176
                     /region_name="FLYWCH"
                     /note="FLYWCH zinc finger domain; pfam04500"
                     /db_xref="CDD:461332"
     Region          272..330
                     /region_name="FLYWCH"
                     /note="FLYWCH zinc finger domain; pfam04500"
                     /db_xref="CDD:461332"
     Region          331..391
                     /region_name="FLYWCH_u"
                     /note="FLYWCH-type zinc finger-containing protein 1;
                     pfam16662"
                     /db_xref="CDD:406949"
     Region          417..475
                     /region_name="FLYWCH"
                     /note="FLYWCH zinc finger domain; pfam04500"
                     /db_xref="CDD:461332"
     Region          505..563
                     /region_name="FLYWCH"
                     /note="FLYWCH zinc finger domain; pfam04500"
                     /db_xref="CDD:461332"
     Region          595..653
                     /region_name="FLYWCH"
                     /note="FLYWCH zinc finger domain; pfam04500"
                     /db_xref="CDD:461332"
     CDS             1..715
                     /gene="FLYWCH1"
                     /coded_by="XM_061152651.1:448..2595"
                     /db_xref="GeneID:133063366"
ORIGIN      
        1 mplpepseqe gesvkagqep speppepgtd vvleaptkpm efselvllaa stesgdgvdp
       61 qseevhcvlt lemadpdtla gtpqilpvee qrgvvqprpq tqalkpskpn ivtqpleflr
      121 tpfggrllvl esflykqeka vgdkvywkcr eraelgcrar aitrgprati mrghchppde
      181 eglearrqrq klpcpalpeg lagsqgpgsr veeplegagp wlcpvepept pgpllsnpal
      241 eedeglrala llrlppkkrs tlgsrgpppl eflrtcyggs flvhqsflyk rekavgdkvy
      301 wtcrdhtqhg crsraitqgh rvtvmrghch apdveglkar rqqeramaal raqpggpggp
      361 edkplqgvds llyrrgpgpl tltrprprkr ptandkdlpa epqgeedkde dpggpeflrt
      421 plggsflvye sflyrrekaa gekvywtcrd qarmgcrsra itqgrrvtvm rghchppdlg
      481 glealrqrek rpgtaqrgsp ggpeflrtpl ggsflvyesf lyrrekaage kvywtcrdqa
      541 rmgcrsrait qgprvmvmrr hchppdlggl ealrqreqlp spaqregsap qpleflrtsl
      601 ggrflvyesf lyrkekaage kvywmcrdqa rkgcrsrait qgpqvtimrs hchppdlagl
      661 ealrqrerlp spaqqedpek vkllpevqlc fetcapecqq sygkvesiql nsesq
//
LOCUS       XP_061008635             497 aa            linear   MAM 02-DEC-2023
DEFINITION  membrane-associated tyrosine- and threonine-specific
            cdc2-inhibitory kinase [Dama dama].
ACCESSION   XP_061008635
VERSION     XP_061008635.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152652.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..497
                     /product="membrane-associated tyrosine- and
                     threonine-specific cdc2-inhibitory kinase"
                     /calculated_mol_wt=54032
     Region          99..348
                     /region_name="PKc_Myt1"
                     /note="Catalytic domain of the Dual-specificity protein
                     kinase, Myt1; cd14050"
                     /db_xref="CDD:270952"
     Site            order(107..111,115,128,130,162,178..181,184,186,224,226,
                     228..229,231,242,245,260..263)
                     /site_type="active"
                     /db_xref="CDD:270952"
     Site            order(107..111,115,128,130,162,178..181,184,224,226,
                     228..229,231,242)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270952"
     Site            order(111,184,186,224,226,228,245,260..263)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270952"
     Site            241..263
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270952"
     CDS             1..497
                     /gene="PKMYT1"
                     /coded_by="XM_061152652.1:373..1866"
                     /db_xref="GeneID:133063367"
ORIGIN      
        1 mlmpaegtpp plggtpvpvp ayfrhaepgf slkrprglsq slpprppakg sipvsrlfpp
       61 rtpgwhqpha rrvsfrdqas eplqspgydp srpesffqqs fhrlgrlghg sygevfkvrs
      121 kedgrlyavk rsmspfrgpk drtrklaevg ghekvgqhpr cvrleqawee ggilylqtel
      181 cgpslqqhce awgaglpeaq vwgylrdtll alahlhgqgl vhldvkpani flgprgrckl
      241 gdfgllvelg asgaseaqeg dprymapell qgsygtaadv fslgltilev acnmelprgg
      301 egwqrlrqgy lppeftagls selrsvlvtm lepdpnlrat aeallalpvl rqprpwsvlw
      361 fmaaealsrg walwqallsl lcwlwhglah paswlqppgp patppgsppc sllldrslss
      421 twgddsigps lspeailara asststprng spapqsrhpp rdaldlsdid sepprgtfpa
      481 feprnllslf edslgps
//
LOCUS       XP_061008636             497 aa            linear   MAM 02-DEC-2023
DEFINITION  membrane-associated tyrosine- and threonine-specific
            cdc2-inhibitory kinase [Dama dama].
ACCESSION   XP_061008636
VERSION     XP_061008636.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152653.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..497
                     /product="membrane-associated tyrosine- and
                     threonine-specific cdc2-inhibitory kinase"
                     /calculated_mol_wt=54032
     Region          99..348
                     /region_name="PKc_Myt1"
                     /note="Catalytic domain of the Dual-specificity protein
                     kinase, Myt1; cd14050"
                     /db_xref="CDD:270952"
     Site            order(107..111,115,128,130,162,178..181,184,186,224,226,
                     228..229,231,242,245,260..263)
                     /site_type="active"
                     /db_xref="CDD:270952"
     Site            order(107..111,115,128,130,162,178..181,184,224,226,
                     228..229,231,242)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270952"
     Site            order(111,184,186,224,226,228,245,260..263)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270952"
     Site            241..263
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270952"
     CDS             1..497
                     /gene="PKMYT1"
                     /coded_by="XM_061152653.1:361..1854"
                     /db_xref="GeneID:133063367"
ORIGIN      
        1 mlmpaegtpp plggtpvpvp ayfrhaepgf slkrprglsq slpprppakg sipvsrlfpp
       61 rtpgwhqpha rrvsfrdqas eplqspgydp srpesffqqs fhrlgrlghg sygevfkvrs
      121 kedgrlyavk rsmspfrgpk drtrklaevg ghekvgqhpr cvrleqawee ggilylqtel
      181 cgpslqqhce awgaglpeaq vwgylrdtll alahlhgqgl vhldvkpani flgprgrckl
      241 gdfgllvelg asgaseaqeg dprymapell qgsygtaadv fslgltilev acnmelprgg
      301 egwqrlrqgy lppeftagls selrsvlvtm lepdpnlrat aeallalpvl rqprpwsvlw
      361 fmaaealsrg walwqallsl lcwlwhglah paswlqppgp patppgsppc sllldrslss
      421 twgddsigps lspeailara asststprng spapqsrhpp rdaldlsdid sepprgtfpa
      481 feprnllslf edslgps
//
LOCUS       XP_061008637             497 aa            linear   MAM 02-DEC-2023
DEFINITION  membrane-associated tyrosine- and threonine-specific
            cdc2-inhibitory kinase [Dama dama].
ACCESSION   XP_061008637
VERSION     XP_061008637.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152654.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..497
                     /product="membrane-associated tyrosine- and
                     threonine-specific cdc2-inhibitory kinase"
                     /calculated_mol_wt=54032
     Region          99..348
                     /region_name="PKc_Myt1"
                     /note="Catalytic domain of the Dual-specificity protein
                     kinase, Myt1; cd14050"
                     /db_xref="CDD:270952"
     Site            order(107..111,115,128,130,162,178..181,184,186,224,226,
                     228..229,231,242,245,260..263)
                     /site_type="active"
                     /db_xref="CDD:270952"
     Site            order(107..111,115,128,130,162,178..181,184,224,226,
                     228..229,231,242)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270952"
     Site            order(111,184,186,224,226,228,245,260..263)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270952"
     Site            241..263
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270952"
     CDS             1..497
                     /gene="PKMYT1"
                     /coded_by="XM_061152654.1:1495..2988"
                     /db_xref="GeneID:133063367"
ORIGIN      
        1 mlmpaegtpp plggtpvpvp ayfrhaepgf slkrprglsq slpprppakg sipvsrlfpp
       61 rtpgwhqpha rrvsfrdqas eplqspgydp srpesffqqs fhrlgrlghg sygevfkvrs
      121 kedgrlyavk rsmspfrgpk drtrklaevg ghekvgqhpr cvrleqawee ggilylqtel
      181 cgpslqqhce awgaglpeaq vwgylrdtll alahlhgqgl vhldvkpani flgprgrckl
      241 gdfgllvelg asgaseaqeg dprymapell qgsygtaadv fslgltilev acnmelprgg
      301 egwqrlrqgy lppeftagls selrsvlvtm lepdpnlrat aeallalpvl rqprpwsvlw
      361 fmaaealsrg walwqallsl lcwlwhglah paswlqppgp patppgsppc sllldrslss
      421 twgddsigps lspeailara asststprng spapqsrhpp rdaldlsdid sepprgtfpa
      481 feprnllslf edslgps
//
LOCUS       XP_061008638             273 aa            linear   MAM 02-DEC-2023
DEFINITION  progestin and adipoQ receptor family member 4 isoform X1 [Dama
            dama].
ACCESSION   XP_061008638
VERSION     XP_061008638.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152655.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..273
                     /product="progestin and adipoQ receptor family member 4
                     isoform X1"
                     /calculated_mol_wt=29321
     Region          43..254
                     /region_name="HlyIII"
                     /note="Haemolysin-III related; cl03831"
                     /db_xref="CDD:470885"
     CDS             1..273
                     /gene="PAQR4"
                     /coded_by="XM_061152655.1:301..1122"
                     /db_xref="GeneID:133063368"
ORIGIN      
        1 maflagprll dwasspphlq fnkfvltgyr passgsgclr slfymhnelg niythglall
       61 gflvllpmtm pwgqlgedgw lwgthcvacl appagsvlyh lfmchkggsp vytrllaldm
      121 cgvclintlg alpiihctla crpwlrpaal lgytllsgva gwraltapst sarlrafgwq
      181 agarllvfga rgaglgsgap gslrcylrmd alallgglvn varlperwvp grfdywgnsh
      241 qimhllsvgs ilqlhagvvp dllwaarhtc lpd
//
LOCUS       XP_061008639             199 aa            linear   MAM 02-DEC-2023
DEFINITION  progestin and adipoQ receptor family member 4 isoform X2 [Dama
            dama].
ACCESSION   XP_061008639
VERSION     XP_061008639.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152656.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..199
                     /product="progestin and adipoQ receptor family member 4
                     isoform X2"
                     /calculated_mol_wt=21394
     Region          <57..180
                     /region_name="HlyIII"
                     /note="Haemolysin-III related; cl03831"
                     /db_xref="CDD:470885"
     CDS             1..199
                     /gene="PAQR4"
                     /coded_by="XM_061152656.1:308..907"
                     /db_xref="GeneID:133063368"
ORIGIN      
        1 maflagprll dwasspphlq fnkfvltgyr passgsgclr slfymhnelg niythgalpi
       61 ihctlacrpw lrpaallgyt llsgvagwra ltapstsarl rafgwqagar llvfgargag
      121 lgsgapgslr cylrmdalal lgglvnvarl perwvpgrfd ywgnshqimh llsvgsilql
      181 hagvvpdllw aarhtclpd
//
LOCUS       XP_061008640             505 aa            linear   MAM 02-DEC-2023
DEFINITION  BICD family-like cargo adapter 2 isoform X1 [Dama dama].
ACCESSION   XP_061008640
VERSION     XP_061008640.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152657.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..505
                     /product="BICD family-like cargo adapter 2 isoform X1"
                     /calculated_mol_wt=57206
     Region          <49..>309
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          <209..>489
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..505
                     /gene="BICDL2"
                     /coded_by="XM_061152657.1:286..1803"
                     /db_xref="GeneID:133063369"
ORIGIN      
        1 mnspegpsfp agllsggasp sgdegffpfv lerrdsflgg gpgpeepedl alqlqqkekd
       61 lllaaelgkm llerneelqr qldtlntqha ereeqlqqen helrrglaar gaewearave
      121 lerdvealra qlgeqrseqq dsgreraral selgeqnlrl sqqlaqasqt eqelqrelds
      181 lqgqcqaqal aaaelrtrle slqgenqmlq srrqdleaqi rglreelekg rgrlqathee
      241 llllrrerre hglelerars eteealsalr rlqrrvsele eesrlqdadl sgaslqlela
      301 hslhrdqdqn qntdrsgdpl ttlsletqea ssqqrspqer lepprkgasl speeilgeee
      361 eevvrlqvem alqqaelqsl reelqrqkel rvqdpeeals salsdrdeam kkvlelslel
      421 srvsverdsl srellrtirq kvaltqelea wqddmqvvig qqlrsqrqqe lsaaasaprp
      481 aptrfslrls prpagsffst lfrrt
//
LOCUS       XP_061008641             505 aa            linear   MAM 02-DEC-2023
DEFINITION  BICD family-like cargo adapter 2 isoform X1 [Dama dama].
ACCESSION   XP_061008641
VERSION     XP_061008641.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152658.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..505
                     /product="BICD family-like cargo adapter 2 isoform X1"
                     /calculated_mol_wt=57206
     Region          <49..>309
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          <209..>489
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..505
                     /gene="BICDL2"
                     /coded_by="XM_061152658.1:160..1677"
                     /db_xref="GeneID:133063369"
ORIGIN      
        1 mnspegpsfp agllsggasp sgdegffpfv lerrdsflgg gpgpeepedl alqlqqkekd
       61 lllaaelgkm llerneelqr qldtlntqha ereeqlqqen helrrglaar gaewearave
      121 lerdvealra qlgeqrseqq dsgreraral selgeqnlrl sqqlaqasqt eqelqrelds
      181 lqgqcqaqal aaaelrtrle slqgenqmlq srrqdleaqi rglreelekg rgrlqathee
      241 llllrrerre hglelerars eteealsalr rlqrrvsele eesrlqdadl sgaslqlela
      301 hslhrdqdqn qntdrsgdpl ttlsletqea ssqqrspqer lepprkgasl speeilgeee
      361 eevvrlqvem alqqaelqsl reelqrqkel rvqdpeeals salsdrdeam kkvlelslel
      421 srvsverdsl srellrtirq kvaltqelea wqddmqvvig qqlrsqrqqe lsaaasaprp
      481 aptrfslrls prpagsffst lfrrt
//
LOCUS       XP_061008642             505 aa            linear   MAM 02-DEC-2023
DEFINITION  BICD family-like cargo adapter 2 isoform X1 [Dama dama].
ACCESSION   XP_061008642
VERSION     XP_061008642.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152659.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..505
                     /product="BICD family-like cargo adapter 2 isoform X1"
                     /calculated_mol_wt=57206
     Region          <49..>309
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          <209..>489
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..505
                     /gene="BICDL2"
                     /coded_by="XM_061152659.1:76..1593"
                     /db_xref="GeneID:133063369"
ORIGIN      
        1 mnspegpsfp agllsggasp sgdegffpfv lerrdsflgg gpgpeepedl alqlqqkekd
       61 lllaaelgkm llerneelqr qldtlntqha ereeqlqqen helrrglaar gaewearave
      121 lerdvealra qlgeqrseqq dsgreraral selgeqnlrl sqqlaqasqt eqelqrelds
      181 lqgqcqaqal aaaelrtrle slqgenqmlq srrqdleaqi rglreelekg rgrlqathee
      241 llllrrerre hglelerars eteealsalr rlqrrvsele eesrlqdadl sgaslqlela
      301 hslhrdqdqn qntdrsgdpl ttlsletqea ssqqrspqer lepprkgasl speeilgeee
      361 eevvrlqvem alqqaelqsl reelqrqkel rvqdpeeals salsdrdeam kkvlelslel
      421 srvsverdsl srellrtirq kvaltqelea wqddmqvvig qqlrsqrqqe lsaaasaprp
      481 aptrfslrls prpagsffst lfrrt
//
LOCUS       XP_061008644             504 aa            linear   MAM 02-DEC-2023
DEFINITION  BICD family-like cargo adapter 2 isoform X2 [Dama dama].
ACCESSION   XP_061008644
VERSION     XP_061008644.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152661.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..504
                     /product="BICD family-like cargo adapter 2 isoform X2"
                     /calculated_mol_wt=57077
     Region          <50..>470
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..504
                     /gene="BICDL2"
                     /coded_by="XM_061152661.1:287..1801"
                     /db_xref="GeneID:133063369"
ORIGIN      
        1 mnspegpsfp agllsggasp sgdegffpfv lerrdsflgg gpgpeepedl alqlqqkekd
       61 lllaaelgkm llerneelqr qldtlntqha ereelqqenh elrrglaarg aewearavel
      121 erdvealraq lgeqrseqqd sgrerarals elgeqnlrls qqlaqasqte qelqreldsl
      181 qgqcqaqala aaelrtrles lqgenqmlqs rrqdleaqir glreelekgr grlqatheel
      241 lllrrerreh glelerarse teealsalrr lqrrvselee esrlqdadls gaslqlelah
      301 slhrdqdqnq ntdrsgdplt tlsletqeas sqqrspqerl epprkgasls peeilgeeee
      361 evvrlqvema lqqaelqslr eelqrqkelr vqdpeealss alsdrdeamk kvlelslels
      421 rvsverdsls rellrtirqk valtqeleaw qddmqvvigq qlrsqrqqel saaasaprpa
      481 ptrfslrlsp rpagsffstl frrt
//
LOCUS       XP_061008645             503 aa            linear   MAM 02-DEC-2023
DEFINITION  BICD family-like cargo adapter 2 isoform X3 [Dama dama].
ACCESSION   XP_061008645
VERSION     XP_061008645.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152662.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..503
                     /product="BICD family-like cargo adapter 2 isoform X3"
                     /calculated_mol_wt=56977
     Region          <74..>486
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..503
                     /gene="BICDL2"
                     /coded_by="XM_061152662.1:286..1797"
                     /db_xref="GeneID:133063369"
ORIGIN      
        1 mnspegpsfp agllsggasp sgdegffpfv lerrdsflgg gpgpeepedl alqlqqkekd
       61 lllaaelgkm llerneelqr qldtlntqha ereeqlqqen helrrglaar gaewearave
      121 lerdvealra qlgeqrseqq dsgreraral selgeqnlrl sqqlaqasqt eqelqrelds
      181 lqgqcqaqal aaaelrtrle slqgenqmlq srrqdleaqi rglreelekg rgrlqathee
      241 llllrrerre hglelerars eteealsalr rlqrrvsele eesrlqdadl sgaslqlela
      301 hslhrdqdqn qntdrsgdpl ttlsletqea ssqqrspqer lepprkgasl speeilgeee
      361 eevvrlqmal qqaelqslre elqrqkelrv qdpeealssa lsdrdeamkk vlelslelsr
      421 vsverdslsr ellrtirqkv altqeleawq ddmqvvigqq lrsqrqqels aaasaprpap
      481 trfslrlspr pagsffstlf rrt
//
LOCUS       XP_061008646             341 aa            linear   MAM 02-DEC-2023
DEFINITION  THO complex subunit 6 homolog isoform X1 [Dama dama].
ACCESSION   XP_061008646
VERSION     XP_061008646.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152663.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..341
                     /product="THO complex subunit 6 homolog isoform X1"
                     /calculated_mol_wt=37482
     Region          28..74
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <31..287
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          79..115
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          130..165
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          171..210
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..341
                     /gene="THOC6"
                     /coded_by="XM_061152663.1:95..1120"
                     /db_xref="GeneID:133063370"
ORIGIN      
        1 meraaqqavp lgqmevfqal qrlhmtifsq svspcgkfla agnnygqiai fslsaalsse
       61 akeeskkpmv tfqahdgpvy smvstdrhll sagdgevkaw lwaeilkkgc kelwrrqppy
      121 rtslevpein alllvpkenl lilaggdcql hamdletgtf mwalrghtdy ihclalrers
      181 pevlsggedg avrlwdlrta kevqtievyk heecsrphng rwigclatds dwmvcgggpa
      241 ltlwhlrsst pttvfpmrap qkhvtfyqdl ilsagqgrcv nqwqlsgelk aqvpgsspgl
      301 lslslnqqpa apeckvltaa gnscrvdvft nlgyrafsls f
//
LOCUS       XP_061008647             328 aa            linear   MAM 02-DEC-2023
DEFINITION  THO complex subunit 6 homolog isoform X2 [Dama dama].
ACCESSION   XP_061008647
VERSION     XP_061008647.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152664.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..328
                     /product="THO complex subunit 6 homolog isoform X2"
                     /calculated_mol_wt=36102
     Region          15..61
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <18..274
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          66..102
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          117..152
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          158..197
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..328
                     /gene="THOC6"
                     /coded_by="XM_061152664.1:72..1058"
                     /db_xref="GeneID:133063370"
ORIGIN      
        1 mevfqalqrl hmtifsqsvs pcgkflaagn nygqiaifsl saalsseake eskkpmvtfq
       61 ahdgpvysmv stdrhllsag dgevkawlwa eilkkgckel wrrqppyrts levpeinall
      121 lvpkenllil aggdcqlham dletgtfmwa lrghtdyihc lalrerspev lsggedgavr
      181 lwdlrtakev qtievykhee csrphngrwi gclatdsdwm vcgggpaltl whlrsstptt
      241 vfpmrapqkh vtfyqdlils agqgrcvnqw qlsgelkaqv pgsspgllsl slnqqpaape
      301 ckvltaagns crvdvftnlg yrafslsf
//
LOCUS       XP_061008648             138 aa            linear   MAM 02-DEC-2023
DEFINITION  host cell factor C1 regulator 1 isoform X1 [Dama dama].
ACCESSION   XP_061008648
VERSION     XP_061008648.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152665.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..138
                     /product="host cell factor C1 regulator 1 isoform X1"
                     /calculated_mol_wt=15196
     Region          2..134
                     /region_name="HPIP"
                     /note="HCF-1 beta-propeller-interacting protein family;
                     pfam15226"
                     /db_xref="CDD:373659"
     CDS             1..138
                     /gene="HCFC1R1"
                     /coded_by="XM_061152665.1:139..555"
                     /db_xref="GeneID:133063371"
ORIGIN      
        1 milqqplerg pqgraqrdpr aasgasggld assplrgavp mstkrrleee qeplrkqfls
       61 eenmathfsr lslhndhpyc spprafppal pplrspcsel llwrypgnli pealrllrlg
      121 dtptphypat pagdmmel
//
LOCUS       XP_061008649             119 aa            linear   MAM 02-DEC-2023
DEFINITION  host cell factor C1 regulator 1 isoform X2 [Dama dama].
ACCESSION   XP_061008649
VERSION     XP_061008649.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152666.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..119
                     /product="host cell factor C1 regulator 1 isoform X2"
                     /calculated_mol_wt=13099
     Region          2..115
                     /region_name="HPIP"
                     /note="HCF-1 beta-propeller-interacting protein family;
                     pfam15226"
                     /db_xref="CDD:373659"
     CDS             1..119
                     /gene="HCFC1R1"
                     /coded_by="XM_061152666.1:139..498"
                     /db_xref="GeneID:133063371"
ORIGIN      
        1 milqqplerg pqgraqrdpr aasgasggld areplrkqfl seenmathfs rlslhndhpy
       61 cspprafppa lpplrspcse lllwrypgnl ipealrllrl gdtptphypa tpagdmmel
//
LOCUS       XP_061008650             129 aa            linear   MAM 02-DEC-2023
DEFINITION  tumor necrosis factor receptor superfamily member 12A [Dama dama].
ACCESSION   XP_061008650
VERSION     XP_061008650.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152667.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..129
                     /product="tumor necrosis factor receptor superfamily
                     member 12A"
                     /calculated_mol_wt=13464
     Region          <28..129
                     /region_name="TNFRSF"
                     /note="Tumor necrosis factor receptor superfamily
                     (TNFRSF); cl22855"
                     /db_xref="CDD:473981"
     Region          36..104
                     /region_name="CRD2"
                     /note="CRD2 [structural motif]"
                     /db_xref="CDD:276900"
     CDS             1..129
                     /gene="TNFRSF12A"
                     /coded_by="XM_061152667.1:40..429"
                     /db_xref="GeneID:133063372"
ORIGIN      
        1 mapcplrpll rllvlglgla llraaagerv pgttpcsrgs swsadldkcm dcascparph
       61 sdfclgcaaa ppapfrllwp ilggalglal vlgllsgflv wrrcrrrekf ttpieetgge
      121 gcpgvaliq
//
LOCUS       XP_061008651             558 aa            linear   MAM 02-DEC-2023
DEFINITION  matrix metalloproteinase-25 [Dama dama].
ACCESSION   XP_061008651
VERSION     XP_061008651.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152668.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..558
                     /product="matrix metalloproteinase-25"
                     /calculated_mol_wt=61649
     Region          22..82
                     /region_name="PG_binding_1"
                     /note="Putative peptidoglycan binding domain; pfam01471"
                     /db_xref="CDD:460223"
     Region          112..277
                     /region_name="ZnMc_MMP"
                     /note="Zinc-dependent metalloprotease, matrix
                     metalloproteinase (MMP) sub-family. MMPs are responsible
                     for a great deal of pericellular proteolysis of
                     extracellular matrix and cell surface molecules, playing
                     crucial roles in morphogenesis, cell fate...; cd04278"
                     /db_xref="CDD:239805"
     Site            order(168,180,187..193,203,230..231,240,250..252)
                     /site_type="active"
                     /note="TIMP-binding surface [active]"
                     /db_xref="CDD:239805"
     Site            order(230..231,234,240)
                     /site_type="active"
                     /db_xref="CDD:239805"
     Region          313..505
                     /region_name="HX"
                     /note="Hemopexin-like repeats.; Hemopexin is a
                     heme-binding protein that transports heme to the liver.
                     Hemopexin-like repeats occur in vitronectin and some
                     matrix metalloproteinases family (matrixins). The HX
                     repeats of some matrixins bind tissue inhibitor of...;
                     cd00094"
                     /db_xref="CDD:238046"
     Site            order(319,321,368,370,414,416,462,464)
                     /site_type="metal-binding"
                     /note="Metal binding sites [ion binding]"
                     /db_xref="CDD:238046"
     CDS             1..558
                     /gene="MMP25"
                     /coded_by="XM_061152668.1:295..1971"
                     /db_xref="GeneID:133063373"
ORIGIN      
        1 mlrllalllp llqpparaqe psaqdvslgv dwltrygylp pphpaqaqlq spaklrdaik
       61 vmqrfaglpe tgvldletma mmhkprcslp dvlgaaglvr rrrryalsgs vwkkrtltwr
      121 vnsfpqgsal sqetvrtlmh halttwgtes dlrfqevgsq gptepdilid farayhqdsy
      181 pfdgqggtla haffpgehpi sgdthfddee twtfgskdge gtdlfavavh efghalglgh
      241 ssapdsimrp fyqgpvgnpa eyrlsqddrd glqqlygrap qtpydkptrk plappppppa
      301 lppdsppqpl pdrcdgnfda ianirgetff fkgpwfwrlq psgqlvsprp arlhrfwegl
      361 paqvkviqaa yarhpdgril lfsgpqfwsf qdrllegaar pltelglpqg eevdavfswp
      421 lngktylirg rqywrydeaa arpdpgyprd lslwegappa pddvtvsntg dtyffkgvhy
      481 wrfpkgsika epdspqpmgp kfldcpapsv rppvlrppra tlkpgdcdcq ceisqaagrp
      541 svlllpllsl lvgglasp
//
LOCUS       XP_061008652             161 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-32 isoform X1 [Dama dama].
ACCESSION   XP_061008652
VERSION     XP_061008652.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152669.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..161
                     /product="interleukin-32 isoform X1"
                     /calculated_mol_wt=18097
     Region          63..160
                     /region_name="IL32"
                     /note="Interleukin 32; pfam15225"
                     /db_xref="CDD:434548"
     CDS             1..161
                     /gene="IL32"
                     /coded_by="XM_061152669.1:213..698"
                     /db_xref="GeneID:133063375"
ORIGIN      
        1 manawgvphd aaslraqmhs rvdylfdlle nqpgeaqgrl sediveyldv riqanlpesq
       61 qessplllea rpevrhriqr psvsaslevq npeesiwara wrrflgflqs lrqwcrdvlt
      121 wlrekaaail eaicsaveav wgllsgfsfs agqlfgnliq v
//
LOCUS       XP_061008653             141 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-32 isoform X2 [Dama dama].
ACCESSION   XP_061008653
VERSION     XP_061008653.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152670.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..141
                     /product="interleukin-32 isoform X2"
                     /calculated_mol_wt=15814
     Region          43..140
                     /region_name="IL32"
                     /note="Interleukin 32; pfam15225"
                     /db_xref="CDD:434548"
     CDS             1..141
                     /gene="IL32"
                     /coded_by="XM_061152670.1:204..629"
                     /db_xref="GeneID:133063375"
ORIGIN      
        1 manawgvphd aaslraqmhs rvdylfdlle nqpgeaqesq qessplllea rpevrhriqr
       61 psvsaslevq npeesiwara wrrflgflqs lrqwcrdvlt wlrekaaail eaicsaveav
      121 wgllsgfsfs agqlfgnliq v
//
LOCUS       XP_061008654             247 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133063376 isoform X1 [Dama dama].
ACCESSION   XP_061008654
VERSION     XP_061008654.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152671.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..247
                     /product="uncharacterized protein LOC133063376 isoform X1"
                     /calculated_mol_wt=28019
     CDS             1..247
                     /gene="LOC133063376"
                     /coded_by="XM_061152671.1:137..880"
                     /db_xref="GeneID:133063376"
ORIGIN      
        1 mslarrvlsh lallrvqmqg eessffyssp slftaqveaa qgemegalie diveyldvri
       61 qenlpdfeds idilqgrmhq lvdnfcetll wkskdevcsd ltelestcsa dvadavdaqv
      121 nnnsgvprnl dslraqihsr vdyfcdmmgd qpekaqmeaa laemeealmr dilefvedsi
      181 qenlpesspl lcetqqefrr rvcepsgsys ppsgsysppg pnqpfdssts rswydwiler
      241 fyyfnff
//
LOCUS       XP_061008655             210 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133063376 isoform X2 [Dama dama].
ACCESSION   XP_061008655
VERSION     XP_061008655.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152672.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..210
                     /product="uncharacterized protein LOC133063376 isoform X2"
                     /calculated_mol_wt=23919
     CDS             1..210
                     /gene="LOC133063376"
                     /coded_by="XM_061152672.1:258..890"
                     /db_xref="GeneID:133063376"
ORIGIN      
        1 mfafkrtfqs rslrsrswlw ggvpaggqdf edsidilqgr mhqlvdnfce tllwkskdev
       61 csdltelest csadvadavd aqvnnnsgvp rnldslraqi hsrvdyfcdm mgdqpekaqm
      121 eaalaemeea lmrdilefve dsiqenlpes spllcetqqe frrrvcepsg sysppsgsys
      181 ppgpnqpfds stsrswydwi lerfyyfnff
//
LOCUS       XP_061008656             204 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133063376 isoform X3 [Dama dama].
ACCESSION   XP_061008656
VERSION     XP_061008656.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152673.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..204
                     /product="uncharacterized protein LOC133063376 isoform X3"
                     /calculated_mol_wt=23264
     CDS             1..204
                     /gene="LOC133063376"
                     /coded_by="XM_061152673.1:218..832"
                     /db_xref="GeneID:133063376"
ORIGIN      
        1 megaliediv eyldvriqen lpdfedsidi lqgrmhqlvd nfcetllwks kdevcsdlte
       61 lestcsadva davdaqvnnn sgvprnldsl raqihsrvdy fcdmmgdqpe kaqmeaalae
      121 meealmrdil efvedsiqen lpesspllce tqqefrrrvc epsgsyspps gsysppgpnq
      181 pfdsstsrsw ydwilerfyy fnff
//
LOCUS       XP_061008657             550 aa            linear   MAM 02-DEC-2023
DEFINITION  transcriptional repressor RHIT isoform X1 [Dama dama].
ACCESSION   XP_061008657
VERSION     XP_061008657.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152674.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..550
                     /product="transcriptional repressor RHIT isoform X1"
                     /calculated_mol_wt=60393
     Region          124..183
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          <248..484
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          308..328
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(313,315,317,319..320,323..324,327,341,343,347..348,
                     351..352,355,369,371,373,375..376,379..380,383)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          336..356
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(336,339,352,356)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          364..384
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          392..412
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(392,395,408,412)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          420..440
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(425,427,429,431..432,435..436,439,453,455,459..460,
                     463..464,467,481,483,485,487..488,491..492,495)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          448..468
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(448,451,464,468)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          474..496
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          476..496
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          502..524
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          504..524
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..550
                     /gene="ZNF205"
                     /coded_by="XM_061152674.1:323..1975"
                     /db_xref="GeneID:133063378"
ORIGIN      
        1 msaddrgira tqdkergret pghghscqem lsesegtvpl gearesphik mepeelhheg
       61 msqearaqga rgwmplsqga kekvcflpgg alpapqipll sregrtrdrq maaalltaws
      121 qmpvtfddva lylsreewgr ldhtqqsyre vlqkrsglsl agfpfsrpfw asqvqgkgea
      181 pgssrqlghe eeekrgavea dkeelavslg algdvksfks rvgraqveap rcgqraasgq
      241 nsgpakddvq prpveeaqpe sappdtdlpk tqeghfpeqp reggtaapks geeglaldse
      301 agkktykceq cgkafswhsh lvthrrthtg ekpyactdcg krfgrsshli qhqiihtgek
      361 pytcpscwks fshhstliqh qrihtgekpy vcdrcakrft rrsdlvthqg thtgakphkc
      421 picgkcftqs salvthqrth tgvkpypcpe cgkcfsqrsn liahnrthtg ekpyhcldcg
      481 ksfshsshlt ahqrthrgvr pyscplcgks fsrrsnlhrh ekihtagpka lamlmlgaag
      541 tlaapppapt
//
LOCUS       XP_061008658             550 aa            linear   MAM 02-DEC-2023
DEFINITION  transcriptional repressor RHIT isoform X1 [Dama dama].
ACCESSION   XP_061008658
VERSION     XP_061008658.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152675.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..550
                     /product="transcriptional repressor RHIT isoform X1"
                     /calculated_mol_wt=60393
     Region          124..183
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          <248..484
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          308..328
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(313,315,317,319..320,323..324,327,341,343,347..348,
                     351..352,355,369,371,373,375..376,379..380,383)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          336..356
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(336,339,352,356)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          364..384
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          392..412
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(392,395,408,412)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          420..440
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(425,427,429,431..432,435..436,439,453,455,459..460,
                     463..464,467,481,483,485,487..488,491..492,495)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          448..468
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(448,451,464,468)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          474..496
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          476..496
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          502..524
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          504..524
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..550
                     /gene="ZNF205"
                     /coded_by="XM_061152675.1:204..1856"
                     /db_xref="GeneID:133063378"
ORIGIN      
        1 msaddrgira tqdkergret pghghscqem lsesegtvpl gearesphik mepeelhheg
       61 msqearaqga rgwmplsqga kekvcflpgg alpapqipll sregrtrdrq maaalltaws
      121 qmpvtfddva lylsreewgr ldhtqqsyre vlqkrsglsl agfpfsrpfw asqvqgkgea
      181 pgssrqlghe eeekrgavea dkeelavslg algdvksfks rvgraqveap rcgqraasgq
      241 nsgpakddvq prpveeaqpe sappdtdlpk tqeghfpeqp reggtaapks geeglaldse
      301 agkktykceq cgkafswhsh lvthrrthtg ekpyactdcg krfgrsshli qhqiihtgek
      361 pytcpscwks fshhstliqh qrihtgekpy vcdrcakrft rrsdlvthqg thtgakphkc
      421 picgkcftqs salvthqrth tgvkpypcpe cgkcfsqrsn liahnrthtg ekpyhcldcg
      481 ksfshsshlt ahqrthrgvr pyscplcgks fsrrsnlhrh ekihtagpka lamlmlgaag
      541 tlaapppapt
//
LOCUS       XP_061008659             549 aa            linear   MAM 02-DEC-2023
DEFINITION  transcriptional repressor RHIT isoform X2 [Dama dama].
ACCESSION   XP_061008659
VERSION     XP_061008659.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152676.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..549
                     /product="transcriptional repressor RHIT isoform X2"
                     /calculated_mol_wt=60322
     Region          124..182
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          <247..483
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          307..327
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(312,314,316,318..319,322..323,326,340,342,346..347,
                     350..351,354,368,370,372,374..375,378..379,382)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          335..355
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(335,338,351,355)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          363..383
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          391..411
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(391,394,407,411)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          419..439
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(424,426,428,430..431,434..435,438,452,454,458..459,
                     462..463,466,480,482,484,486..487,490..491,494)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          447..467
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(447,450,463,467)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          473..495
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          475..495
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          501..523
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          503..523
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..549
                     /gene="ZNF205"
                     /coded_by="XM_061152676.1:323..1972"
                     /db_xref="GeneID:133063378"
ORIGIN      
        1 msaddrgira tqdkergret pghghscqem lsesegtvpl gearesphik mepeelhheg
       61 msqearaqga rgwmplsqga kekvcflpgg alpapqipll sregrtrdrq maaalltaws
      121 qmpvtfddva lylsreewgr ldhtqqsyre vlqkrsglsl gfpfsrpfwa sqvqgkgeap
      181 gssrqlghee eekrgavead keelavslga lgdvksfksr vgraqveapr cgqraasgqn
      241 sgpakddvqp rpveeaqpes appdtdlpkt qeghfpeqpr eggtaapksg eeglaldsea
      301 gkktykceqc gkafswhshl vthrrthtge kpyactdcgk rfgrsshliq hqiihtgekp
      361 ytcpscwksf shhstliqhq rihtgekpyv cdrcakrftr rsdlvthqgt htgakphkcp
      421 icgkcftqss alvthqrtht gvkpypcpec gkcfsqrsnl iahnrthtge kpyhcldcgk
      481 sfshsshlta hqrthrgvrp yscplcgksf srrsnlhrhe kihtagpkal amlmlgaagt
      541 laapppapt
//
LOCUS       XP_061008661             375 aa            linear   MAM 02-DEC-2023
DEFINITION  endogenous retrovirus group K member 6 Gag polyprotein-like [Dama
            dama].
ACCESSION   XP_061008661
VERSION     XP_061008661.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152678.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..375
                     /product="endogenous retrovirus group K member 6 Gag
                     polyprotein-like"
                     /calculated_mol_wt=41118
     Region          <1..40
                     /region_name="Gag_p24"
                     /note="gag protein p24 N-terminal domain; pfam00607"
                     /db_xref="CDD:459864"
     Region          43..112
                     /region_name="Gag_p24_C"
                     /note="Gag protein p24 C-terminal domain; pfam19317"
                     /db_xref="CDD:466038"
     Region          150..>230
                     /region_name="PTZ00368"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional"
                     /db_xref="CDD:173561"
     Region          203..>231
                     /region_name="zf-CCHC_5"
                     /note="GAG-polyprotein viral zinc-finger; pfam14787"
                     /db_xref="CDD:373297"
     CDS             1..375
                     /gene="LOC133063379"
                     /coded_by="XM_061152678.1:523..1650"
                     /db_xref="GeneID:133063379"
ORIGIN      
        1 mlagtdefes vrgqmnldkk aleqvtacal gawrslpqgk eltsslsnik qkpeepyedf
       61 isrliegihr vipseqaaei likqlafena nstcqaihrp ikksgdigdy ikqcsdvgpa
      121 mmqgiaiaaa ikgsfyqqai qsfftgkgnp qkghsnsqgq nanlakacfs cgqmghfsra
      181 cphkatntpl lnststvmap nlpktpcprc qkgyhwakdc kskfhkngtl lvsgqqpgng
      241 lrrqsqvptt ivattlnpfi psvppqnsse qpqavqdwts lpppqqkgrh ksikmfgkep
      301 skiivpynke qlnallllne dwqiaignyp gqilhhlpas pllnffsrhp vifqercqvs
      361 piegamlvft igwvf
//
LOCUS       XP_061008662             375 aa            linear   MAM 02-DEC-2023
DEFINITION  endogenous retrovirus group K member 6 Gag polyprotein-like [Dama
            dama].
ACCESSION   XP_061008662
VERSION     XP_061008662.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152679.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..375
                     /product="endogenous retrovirus group K member 6 Gag
                     polyprotein-like"
                     /calculated_mol_wt=41118
     Region          <1..40
                     /region_name="Gag_p24"
                     /note="gag protein p24 N-terminal domain; pfam00607"
                     /db_xref="CDD:459864"
     Region          43..112
                     /region_name="Gag_p24_C"
                     /note="Gag protein p24 C-terminal domain; pfam19317"
                     /db_xref="CDD:466038"
     Region          150..>230
                     /region_name="PTZ00368"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional"
                     /db_xref="CDD:173561"
     Region          203..>231
                     /region_name="zf-CCHC_5"
                     /note="GAG-polyprotein viral zinc-finger; pfam14787"
                     /db_xref="CDD:373297"
     CDS             1..375
                     /gene="LOC133063379"
                     /coded_by="XM_061152679.1:523..1650"
                     /db_xref="GeneID:133063379"
ORIGIN      
        1 mlagtdefes vrgqmnldkk aleqvtacal gawrslpqgk eltsslsnik qkpeepyedf
       61 isrliegihr vipseqaaei likqlafena nstcqaihrp ikksgdigdy ikqcsdvgpa
      121 mmqgiaiaaa ikgsfyqqai qsfftgkgnp qkghsnsqgq nanlakacfs cgqmghfsra
      181 cphkatntpl lnststvmap nlpktpcprc qkgyhwakdc kskfhkngtl lvsgqqpgng
      241 lrrqsqvptt ivattlnpfi psvppqnsse qpqavqdwts lpppqqkgrh ksikmfgkep
      301 skiivpynke qlnallllne dwqiaignyp gqilhhlpas pllnffsrhp vifqercqvs
      361 piegamlvft igwvf
//
LOCUS       XP_061008663             698 aa            linear   MAM 02-DEC-2023
DEFINITION  pyrin isoform X1 [Dama dama].
ACCESSION   XP_061008663
VERSION     XP_061008663.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152680.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..698
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..698
                     /product="pyrin isoform X1"
                     /calculated_mol_wt=76949
     Region          6..88
                     /region_name="Pyrin_ASC-like"
                     /note="Pyrin Death Domain found in ASC; cd08321"
                     /db_xref="CDD:260033"
     Region          <139..366
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          369..422
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(375,378,390,392,395,397,414,417)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     Region          446..485
                     /region_name="Bbox2_TRIM20"
                     /note="B-box-type 2 zinc finger found in tripartite
                     motif-containing protein TRIM20 and similar proteins;
                     cd19771"
                     /db_xref="CDD:380829"
     CDS             1..698
                     /gene="MEFV"
                     /coded_by="XM_061152680.1:331..2427"
                     /db_xref="GeneID:133063381"
ORIGIN      
        1 martrsdhll ysleellpyd fekfkfklqn tslekehtri prgqlqtaep vklasllvnh
       61 ygeeyavqlt lqvlrainqh llaeelhrvi specwiqesd tdssatsgss gemkpkslkt
      121 sdglegdkqr qsadgagcpp ssqpeagrgp qkkplgkqrd qkgseglevq gklgartttl
      181 sskrspvlpk vprekekgsy pgvrlrrnas sagrlqglts gsfagspgrr etktsevclp
      241 sgkkrpksle ftispeetgp lhpetlllqe kmntenpssa ttasevatlk tgpaatlekg
      301 srnpehattl egtalrntpl svplagktri gehleptapa ersgtgalka ssvphepsdp
      361 evspsagrlq dkavcplcra qegdpvggsc vhiscscsaa srnpeaslsr ssscprcqdl
      421 lpgkshgsre wqeglqmasl npknlpqcer hmkqvqllfc edhgelicli crlsqehrgh
      481 rvrpieeaal eykeqiqkql ehlkelrksg eeqisqgdkk tvnslkqaet qkqriqcqle
      541 qlcqfleqqe rlfvawleel gqtigqvret ygtrgtrdia vldkligele akqcqpewef
      601 mkdigvtlhr akmvtvpelw atppevkeki hllyqksefv ekrmkhflgr wacgrmggap
      661 spalrsrvaw apwhffsisl vlsvlpsasp rsvpiwgt
//
LOCUS       XP_061008664             676 aa            linear   MAM 02-DEC-2023
DEFINITION  pyrin isoform X2 [Dama dama].
ACCESSION   XP_061008664
VERSION     XP_061008664.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152681.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..676
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..676
                     /product="pyrin isoform X2"
                     /calculated_mol_wt=74652
     Region          6..88
                     /region_name="Pyrin_ASC-like"
                     /note="Pyrin Death Domain found in ASC; cd08321"
                     /db_xref="CDD:260033"
     Region          <139..366
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          369..422
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(375,378,390,392,395,397,414,417)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     Region          446..485
                     /region_name="Bbox2_TRIM20"
                     /note="B-box-type 2 zinc finger found in tripartite
                     motif-containing protein TRIM20 and similar proteins;
                     cd19771"
                     /db_xref="CDD:380829"
     CDS             1..676
                     /gene="MEFV"
                     /coded_by="XM_061152681.1:330..2360"
                     /db_xref="GeneID:133063381"
ORIGIN      
        1 martrsdhll ysleellpyd fekfkfklqn tslekehtri prgqlqtaep vklasllvnh
       61 ygeeyavqlt lqvlrainqh llaeelhrvi specwiqesd tdssatsgss gemkpkslkt
      121 sdglegdkqr qsadgagcpp ssqpeagrgp qkkplgkqrd qkgseglevq gklgartttl
      181 sskrspvlpk vprekekgsy pgvrlrrnas sagrlqglts gsfagspgrr etktsevclp
      241 sgkkrpksle ftispeetgp lhpetlllqe kmntenpssa ttasevatlk tgpaatlekg
      301 srnpehattl egtalrntpl svplagktri gehleptapa ersgtgalka ssvphepsdp
      361 evspsagrlq dkavcplcra qegdpvggsc vhiscscsaa srnpeaslsr ssscprcqdl
      421 lpgkshgsre wqeglqmasl npknlpqcer hmkqvqllfc edhgelicli crlsqehrgh
      481 rvrpieeaal eykeqiqkql ehlkelrksg eeqisqgdkk tvnslkqaet qkqriqcqle
      541 qlcqfleqqe rlfvawleel gqtigqvret ygtrgtrdia vldkligele akqcqpewef
      601 mkdigvtlhr akmvtvpelw atppevkeki hllyqksefv ekrmkhflet lrsevemfng
      661 eygggslcwp gvpcdf
//
LOCUS       XP_061008665             669 aa            linear   MAM 02-DEC-2023
DEFINITION  pyrin isoform X3 [Dama dama].
ACCESSION   XP_061008665
VERSION     XP_061008665.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152682.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..669
                     /product="pyrin isoform X3"
                     /calculated_mol_wt=73862
     Region          6..88
                     /region_name="Pyrin_ASC-like"
                     /note="Pyrin Death Domain found in ASC; cd08321"
                     /db_xref="CDD:260033"
     Region          <139..366
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          369..422
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(375,378,390,392,395,397,414,417)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     Region          446..485
                     /region_name="Bbox2_TRIM20"
                     /note="B-box-type 2 zinc finger found in tripartite
                     motif-containing protein TRIM20 and similar proteins;
                     cd19771"
                     /db_xref="CDD:380829"
     CDS             1..669
                     /gene="MEFV"
                     /coded_by="XM_061152682.1:328..2337"
                     /db_xref="GeneID:133063381"
ORIGIN      
        1 martrsdhll ysleellpyd fekfkfklqn tslekehtri prgqlqtaep vklasllvnh
       61 ygeeyavqlt lqvlrainqh llaeelhrvi specwiqesd tdssatsgss gemkpkslkt
      121 sdglegdkqr qsadgagcpp ssqpeagrgp qkkplgkqrd qkgseglevq gklgartttl
      181 sskrspvlpk vprekekgsy pgvrlrrnas sagrlqglts gsfagspgrr etktsevclp
      241 sgkkrpksle ftispeetgp lhpetlllqe kmntenpssa ttasevatlk tgpaatlekg
      301 srnpehattl egtalrntpl svplagktri gehleptapa ersgtgalka ssvphepsdp
      361 evspsagrlq dkavcplcra qegdpvggsc vhiscscsaa srnpeaslsr ssscprcqdl
      421 lpgkshgsre wqeglqmasl npknlpqcer hmkqvqllfc edhgelicli crlsqehrgh
      481 rvrpieeaal eykeqiqkql ehlkelrksg eeqisqgdkk tvnslkqaet qkqriqcqle
      541 qlcqfleqqe rlfvawleel gqtigqvret ygtrgtrdia vldkligele akqcqpewef
      601 mkdigvtlhr akmvtvpelw atppevkeki hllyqksefv ekrmkhflet lrsevemfnv
      661 aeliggqap
//
LOCUS       XP_061008666             609 aa            linear   MAM 02-DEC-2023
DEFINITION  pyrin isoform X4 [Dama dama].
ACCESSION   XP_061008666
VERSION     XP_061008666.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152683.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..609
                     /product="pyrin isoform X4"
                     /calculated_mol_wt=66806
     Region          6..88
                     /region_name="Pyrin_ASC-like"
                     /note="Pyrin Death Domain found in ASC; cd08321"
                     /db_xref="CDD:260033"
     Region          <139..366
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          369..422
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(375,378,390,392,395,397,414,417)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     Region          446..485
                     /region_name="Bbox2_TRIM20"
                     /note="B-box-type 2 zinc finger found in tripartite
                     motif-containing protein TRIM20 and similar proteins;
                     cd19771"
                     /db_xref="CDD:380829"
     CDS             1..609
                     /gene="MEFV"
                     /coded_by="XM_061152683.1:330..2159"
                     /db_xref="GeneID:133063381"
ORIGIN      
        1 martrsdhll ysleellpyd fekfkfklqn tslekehtri prgqlqtaep vklasllvnh
       61 ygeeyavqlt lqvlrainqh llaeelhrvi specwiqesd tdssatsgss gemkpkslkt
      121 sdglegdkqr qsadgagcpp ssqpeagrgp qkkplgkqrd qkgseglevq gklgartttl
      181 sskrspvlpk vprekekgsy pgvrlrrnas sagrlqglts gsfagspgrr etktsevclp
      241 sgkkrpksle ftispeetgp lhpetlllqe kmntenpssa ttasevatlk tgpaatlekg
      301 srnpehattl egtalrntpl svplagktri gehleptapa ersgtgalka ssvphepsdp
      361 evspsagrlq dkavcplcra qegdpvggsc vhiscscsaa srnpeaslsr ssscprcqdl
      421 lpgkshgsre wqeglqmasl npknlpqcer hmkqvqllfc edhgelicli crlsqehrgh
      481 rvrpieeaal eykeqiqkql ehlkelrksg eeqisqgdkk tvnslkqaet qkqriqcqle
      541 qlcqfleqqe rlfvawleel gqtigqvret ygtrgtrdia vldkligele akqcqpewef
      601 mkgqdgdcp
//
LOCUS       XP_061008667             394 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 200 isoform X1 [Dama dama].
ACCESSION   XP_061008667
VERSION     XP_061008667.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152684.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..394
                     /product="zinc finger protein 200 isoform X1"
                     /calculated_mol_wt=45248
     Region          115..>137
                     /region_name="KRAB_A-box"
                     /note="KRAB (Kruppel-associated box) domain -A box;
                     cl02581"
                     /db_xref="CDD:470626"
     Region          253..>394
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          253..273
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(258,260,262,264..265,268..269,272,286,288,292..293,
                     296..297,300,314,316,318,320..321,324..325,328)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          281..301
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(281,284,297,301)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          309..329
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          337..357
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          365..385
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(365,368,381,385)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     CDS             1..394
                     /gene="ZNF200"
                     /coded_by="XM_061152684.1:242..1426"
                     /db_xref="GeneID:133063382"
ORIGIN      
        1 maakvvpmpp kpkrsfilrv ppnsklgqdl lrdatsgpkt ihqlvlehfl tflpkpslvq
       61 psqkiketlv ivkdvssdlq nrvqprplvt llpregtqqk qetvslclks eseklvvfed
      121 lnvfhsqeec vsldpvqqpt semeedsige mmllavsgnn pegeelqtep vededhrees
      181 sdcdemdcam vpkqspdcqk eerlntsipk erkmrnllvt iendtpleel skyvdinvia
      241 ltrnrrtrrw ytcplcgkqf nessylishq rthtgekpyd cshcgksfnh ktnlnkheri
      301 htgekpyscs qcgknfrqns hrsrhegihi rekifkcpec gktfpenref vvhlqshktk
      361 rpygckkcgr rfgrlsnctr hekthsackt rkqk
//
LOCUS       XP_061008668             393 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 200 isoform X2 [Dama dama].
ACCESSION   XP_061008668
VERSION     XP_061008668.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152685.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..393
                     /product="zinc finger protein 200 isoform X2"
                     /calculated_mol_wt=45177
     Region          115..>137
                     /region_name="KRAB_A-box"
                     /note="KRAB (Kruppel-associated box) domain -A box;
                     cl02581"
                     /db_xref="CDD:470626"
     Region          252..>393
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          252..272
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(257,259,261,263..264,267..268,271,285,287,291..292,
                     295..296,299,313,315,317,319..320,323..324,327)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          280..300
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(280,283,296,300)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          308..328
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          336..356
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          364..384
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(364,367,380,384)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     CDS             1..393
                     /gene="ZNF200"
                     /coded_by="XM_061152685.1:244..1425"
                     /db_xref="GeneID:133063382"
ORIGIN      
        1 maakvvpmpp kpkrsfilrv ppnsklgqdl lrdatsgpkt ihqlvlehfl tflpkpslvq
       61 psqkiketlv ivkdvssdlq nrvqprplvt llpregtqqk qetvslclks eseklvvfed
      121 lnvfhsqeec vsldpvqqpt semeedsige mmllvsgnnp egeelqtepv ededhreess
      181 dcdemdcamv pkqspdcqke erlntsipke rkmrnllvti endtpleels kyvdinvial
      241 trnrrtrrwy tcplcgkqfn essylishqr thtgekpydc shcgksfnhk tnlnkherih
      301 tgekpyscsq cgknfrqnsh rsrhegihir ekifkcpecg ktfpenrefv vhlqshktkr
      361 pygckkcgrr fgrlsnctrh ekthsacktr kqk
//
LOCUS       XP_061008669             374 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1361-like isoform X1 [Dama dama].
ACCESSION   XP_061008669
VERSION     XP_061008669.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152686.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..374
                     /product="olfactory receptor 1361-like isoform X1"
                     /calculated_mol_wt=41502
     Region          95..356
                     /region_name="7tmA_OR1_7-like"
                     /note="olfactory receptor families 1, 7, and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15918"
                     /db_xref="CDD:320584"
     Region          121..147
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320584"
     Site            order(143,146..147,159..164,166..167,170,215,217..221,257,
                     260..262,264..266,268..269,314,317..318,320..321,324,
                     330..331,333..335,338,341..342)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320584"
     Region          159..189
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320584"
     Region          202..223
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320584"
     Region          257..287
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320584"
     Region          294..324
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320584"
     Region          331..356
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320584"
     CDS             1..374
                     /gene="LOC133063384"
                     /coded_by="XM_061152686.1:318..1442"
                     /db_xref="GeneID:133063384"
ORIGIN      
        1 mslafpvrmw vtrcsgflsp aararncrks tpefqsgcpf krrgglgsqh rknqctllrs
       61 gpmgeanqsr vseflllgls rqpqqqqllf llfltmylat vlgnllilla isvdsrlhvp
      121 myfflcnlsf vdtcfssttv pkvlanhvlg sqtisfsgcl tqmyfvfmfm didnfllavm
      181 aydrfvavch plhysakmtp qlcallvtgs wvtasldmll htllmarlsf cadnaiphff
      241 cdvtpllkls csdthlnelm ilieagpimi apficilvsy vlitcavlrv psakgrwkaf
      301 stcgshlavv flfystiifl yfnplsshaa etdvaaavmf svvtpmlnpf iyslrnqdik
      361 kalgkvvaik ffsv
//
LOCUS       XP_061008670             320 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1361-like isoform X2 [Dama dama].
ACCESSION   XP_061008670
VERSION     XP_061008670.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152687.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..320
                     /product="olfactory receptor 1361-like isoform X2"
                     /calculated_mol_wt=35414
     Region          41..302
                     /region_name="7tmA_OR1_7-like"
                     /note="olfactory receptor families 1, 7, and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15918"
                     /db_xref="CDD:320584"
     Region          67..93
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320584"
     Site            order(89,92..93,105..110,112..113,116,161,163..167,203,
                     206..208,210..212,214..215,260,263..264,266..267,270,
                     276..277,279..281,284,287..288)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320584"
     Region          105..135
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320584"
     Region          148..169
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320584"
     Region          203..233
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320584"
     Region          240..270
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320584"
     Region          277..302
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320584"
     CDS             1..320
                     /gene="LOC133063384"
                     /coded_by="XM_061152687.1:178..1140"
                     /db_xref="GeneID:133063384"
ORIGIN      
        1 mfsdvsgpmg eanqsrvsef lllglsrqpq qqqllfllfl tmylatvlgn llillaisvd
       61 srlhvpmyff lcnlsfvdtc fssttvpkvl anhvlgsqti sfsgcltqmy fvfmfmdidn
      121 fllavmaydr fvavchplhy sakmtpqlca llvtgswvta sldmllhtll marlsfcadn
      181 aiphffcdvt pllklscsdt hlnelmilie agpimiapfi cilvsyvlit cavlrvpsak
      241 grwkafstcg shlavvflfy stiiflyfnp lsshaaetdv aaavmfsvvt pmlnpfiysl
      301 rnqdikkalg kvvaikffsv
//
LOCUS       XP_061008671             312 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1361-like isoform X3 [Dama dama].
ACCESSION   XP_061008671
VERSION     XP_061008671.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152688.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..312
                     /product="olfactory receptor 1361-like isoform X3"
                     /calculated_mol_wt=34593
     Region          33..294
                     /region_name="7tmA_OR1_7-like"
                     /note="olfactory receptor families 1, 7, and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15918"
                     /db_xref="CDD:320584"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320584"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,252,255..256,258..259,262,
                     268..269,271..273,276,279..280)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320584"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320584"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320584"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320584"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320584"
     Region          269..294
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320584"
     CDS             1..312
                     /gene="LOC133063384"
                     /coded_by="XM_061152688.1:651..1589"
                     /db_xref="GeneID:133063384"
ORIGIN      
        1 mgeanqsrvs eflllglsrq pqqqqllfll fltmylatvl gnllillais vdsrlhvpmy
       61 fflcnlsfvd tcfssttvpk vlanhvlgsq tisfsgcltq myfvfmfmdi dnfllavmay
      121 drfvavchpl hysakmtpql callvtgswv tasldmllht llmarlsfca dnaiphffcd
      181 vtpllklscs dthlnelmil ieagpimiap ficilvsyvl itcavlrvps akgrwkafst
      241 cgshlavvfl fystiiflyf nplsshaaet dvaaavmfsv vtpmlnpfiy slrnqdikka
      301 lgkvvaikff sv
//
LOCUS       XP_061008673             685 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 263 isoform X1 [Dama dama].
ACCESSION   XP_061008673
VERSION     XP_061008673.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152690.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..685
                     /product="zinc finger protein 263 isoform X1"
                     /calculated_mol_wt=77879
     Region          37..149
                     /region_name="SCAN"
                     /note="leucine rich region; smart00431"
                     /db_xref="CDD:128708"
     Region          218..278
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          381..401
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          381..401
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          435..>685
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          437..457
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(442,444,446,448..449,452..453,456,470,472,476..477,
                     480..481,484,498,500,502,504..505,508..509,512)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          465..485
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(465,468,481,485)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          493..513
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          521..541
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          579..599
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(584,586,588,590..591,594..595,598,612,614,618..619,
                     622..623,626,640,642,644,646..647,650..651,654)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          607..627
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(607,610,623,627)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          635..655
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          663..683
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..685
                     /gene="ZNF263"
                     /coded_by="XM_061152690.1:577..2634"
                     /db_xref="GeneID:133063386"
ORIGIN      
        1 masgpgfqdr egllivklee dsawsqelpq pdpgpspeas hlrfrrfrfq eaagpreals
       61 rlqelchgwl qpemrtkeqi lellvleqfl tilpqeiqsr vqelhpesge eavtlvedmq
      121 kelgrlrqkv tnrgqgtevl leeplpleta qespsfklep meterspgrr lqellgpgpk
      181 rdpqtvkera lsapwlslfp pegnmedkel tgpqlpesle dvamyisqee wgrqhpskra
      241 lsrdtvqesy envdslesqv psqealstqv ehggrpwhps vqtckeglss rtpapgeekf
      301 enqeecaqsv spesihrqal lagqargevp wspeqgrprd raeklweppt edrleqplvg
      361 atsckklgrp kelqpkklhl cplcgknfsn nsnlirhqri haaerlcmgv ecaeifggnp
      421 hflslhrahl geeahkclec gksfsqnthl trhqrthtge kpyqcnvcgk sfscnsnlhr
      481 hqrthtgekp ykcpecgeif ahssnllrhq rihtgerpyk caecgksfsr sshlvihert
      541 hekerlypfs ecgeavrdst lfltnpgthp kaekklfqcl tcgksfrqgm hltrhqrtht
      601 gekpykcnlc genfshrsnl irhqrihtge kpytchecgd sfshssnrir hlrthtgekp
      661 ykcsecgesf srssrlmshq rthtg
//
LOCUS       XP_061008674             618 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 263 isoform X2 [Dama dama].
ACCESSION   XP_061008674
VERSION     XP_061008674.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152691.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..618
                     /product="zinc finger protein 263 isoform X2"
                     /calculated_mol_wt=70292
     Region          37..149
                     /region_name="SCAN"
                     /note="leucine rich region; smart00431"
                     /db_xref="CDD:128708"
     Region          314..334
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          314..334
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          368..>618
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          370..390
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(375,377,379,381..382,385..386,389,403,405,409..410,
                     413..414,417,431,433,435,437..438,441..442,445)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          398..418
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(398,401,414,418)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          426..446
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          454..474
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          512..532
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(517,519,521,523..524,527..528,531,545,547,551..552,
                     555..556,559,573,575,577,579..580,583..584,587)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          540..560
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(540,543,556,560)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          568..588
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          596..616
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..618
                     /gene="ZNF263"
                     /coded_by="XM_061152691.1:577..2433"
                     /db_xref="GeneID:133063386"
ORIGIN      
        1 masgpgfqdr egllivklee dsawsqelpq pdpgpspeas hlrfrrfrfq eaagpreals
       61 rlqelchgwl qpemrtkeqi lellvleqfl tilpqeiqsr vqelhpesge eavtlvedmq
      121 kelgrlrqkv tnrgqgtevl leeplpleta qespsfklep meterspgrr lqellgpgpk
      181 rdpqtvkere sqvpsqeals tqvehggrpw hpsvqtckeg lssrtpapge ekfenqeeca
      241 qsvspesihr qallagqarg evpwspeqgr prdraeklwe pptedrleqp lvgatsckkl
      301 grpkelqpkk lhlcplcgkn fsnnsnlirh qrihaaerlc mgvecaeifg gnphflslhr
      361 ahlgeeahkc lecgksfsqn thltrhqrth tgekpyqcnv cgksfscnsn lhrhqrthtg
      421 ekpykcpecg eifahssnll rhqrihtger pykcaecgks fsrsshlvih erthekerly
      481 pfsecgeavr dstlfltnpg thpkaekklf qcltcgksfr qgmhltrhqr thtgekpykc
      541 nlcgenfshr snlirhqrih tgekpytche cgdsfshssn rirhlrthtg ekpykcsecg
      601 esfsrssrlm shqrthtg
//
LOCUS       XP_061008675             600 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 263 isoform X3 [Dama dama].
ACCESSION   XP_061008675
VERSION     XP_061008675.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152692.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..600
                     /product="zinc finger protein 263 isoform X3"
                     /calculated_mol_wt=68433
     Region          37..131
                     /region_name="SCAN"
                     /note="leucine rich region; smart00431"
                     /db_xref="CDD:128708"
     Region          133..193
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          296..316
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          296..316
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          350..>597
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          352..372
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(357,359,361,363..364,367..368,371,385,387,391..392,
                     395..396,399,413,415,417,419..420,423..424,427)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          380..400
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(380,383,396,400)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          408..428
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          436..456
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          494..514
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(499,501,503,505..506,509..510,513,527,529,533..534,
                     537..538,541,555,557,559,561..562,565..566,569)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          522..542
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(522,525,538,542)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          550..570
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          578..598
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..600
                     /gene="ZNF263"
                     /coded_by="XM_061152692.1:577..2379"
                     /db_xref="GeneID:133063386"
ORIGIN      
        1 masgpgfqdr egllivklee dsawsqelpq pdpgpspeas hlrfrrfrfq eaagpreals
       61 rlqelchgwl qpemrtkeqi lellvleqfl tilpqeiqsr vqelhpesge eavtlvedmq
      121 kelgrlrqkl pesledvamy isqeewgrqh pskralsrdt vqesyenvds lesqvpsqea
      181 lstqvehggr pwhpsvqtck eglssrtpap geekfenqee caqsvspesi hrqallagqa
      241 rgevpwspeq grprdraekl wepptedrle qplvgatsck klgrpkelqp kklhlcplcg
      301 knfsnnsnli rhqrihaaer lcmgvecaei fggnphflsl hrahlgeeah kclecgksfs
      361 qnthltrhqr thtgekpyqc nvcgksfscn snlhrhqrth tgekpykcpe cgeifahssn
      421 llrhqrihtg erpykcaecg ksfsrsshlv ihertheker lypfsecgea vrdstlfltn
      481 pgthpkaekk lfqcltcgks frqgmhltrh qrthtgekpy kcnlcgenfs hrsnlirhqr
      541 ihtgekpytc hecgdsfshs snrirhlrth tgekpykcse cgesfsrssr lmshqrthtg
//
LOCUS       XP_061008676             612 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 75D-like isoform X1 [Dama dama].
ACCESSION   XP_061008676
VERSION     XP_061008676.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152693.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..612
                     /product="zinc finger protein 75D-like isoform X1"
                     /calculated_mol_wt=70544
     Region          45..133
                     /region_name="SCAN"
                     /note="SCAN domain; pfam02023"
                     /db_xref="CDD:460417"
     Region          235..275
                     /region_name="KRAB"
                     /note="KRAB box; pfam01352"
                     /db_xref="CDD:460171"
     Region          309..370
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          <469..612
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          479..499
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          507..527
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(512,514,516,518..519,522..523,526,540,542,546..547,
                     550..551,554,568,570,572,574..575,578..579,582)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          535..555
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(535,538,551,555)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          563..583
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          591..611
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..612
                     /gene="LOC133063388"
                     /coded_by="XM_061152693.1:315..2153"
                     /db_xref="GeneID:133063388"
ORIGIN      
        1 mmtvdlkvae flnpqiralw etkgpvaent sqhkkhapqt dslspershq hfrnflyhea
       61 agprevvdql qelcrrwlrp eihskeqile lvvleqflti lpgdtqtlik khhpqsieea
      121 vvlvehlqse tgqtrngvav qelgkeavll geaaeapgfq lkpaesqpvg msweeelwsi
      181 hqglqeplsr nthkepepvc ervvpahril afpeqtdtkd wtvapevvlp esqslltfee
      241 vamyfsqeew elldptqkal yndvmqenye tvislavpah qllafpeqtn tsewtvapel
      301 ilpesqsllt feevamyfsq eewellnptq kalyndvmqe nyetvislal fvlpkpkvis
      361 cleqgeepwv qrplefkdss eelptaglel kndteniqsl clsdleiqap vaiasrkakl
      421 kvpqktigke nhgdvhrvgk lhrdfpvkkk kklstwkqel lklmdlqkke raaerpfkcq
      481 ecgksfrvss dlikhqrvht eekpykcqqc dkrfrwssdl nkhltthqgi kpykcswcgk
      541 gfsqktnlht hqrthtgekp ftchecgkkf nqnchlikhr rthtgeqpyt cstcrrnfsr
      601 rssllrhqkl hq
//
LOCUS       XP_061008677             538 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 75A-like isoform X2 [Dama dama].
ACCESSION   XP_061008677
VERSION     XP_061008677.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152694.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..538
                     /product="zinc finger protein 75A-like isoform X2"
                     /calculated_mol_wt=62073
     Region          45..133
                     /region_name="SCAN"
                     /note="SCAN domain; pfam02023"
                     /db_xref="CDD:460417"
     Region          236..297
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          <395..538
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          405..425
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          433..453
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(438,440,442,444..445,448..449,452,466,468,472..473,
                     476..477,480,494,496,498,500..501,504..505,508)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          461..481
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(461,464,477,481)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          489..509
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          517..537
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..538
                     /gene="LOC133063388"
                     /coded_by="XM_061152694.1:314..1930"
                     /db_xref="GeneID:133063388"
ORIGIN      
        1 mmtvdlkvae flnpqiralw etkgpvaent sqhkkhapqt dslspershq hfrnflyhea
       61 agprevvdql qelcrrwlrp eihskeqile lvvleqflti lpgdtqtlik khhpqsieea
      121 vvlvehlqse tgqtrngvav qelgkeavll geaaeapgfq lkpaesqpvg msweeelwsi
      181 hqglqeplsr nthkepepvc ervvpahril afpeqtdtkd wtvapevvlp esqslltfee
      241 vamyfsqeew elldptqkal yndvmqenye tvislalfvl pkpkviscle qgeepwvqrp
      301 lefkdsseel ptglelkndt eniqslclsd leiqapvaia srkaklkvpq ktigkenhgd
      361 vhrvgklhrd fpvkkkkkls twkqellklm dlqkkeraae rpfkcqecgk sfrvssdlik
      421 hqrvhteekp ykcqqcdkrf rwssdlnkhl tthqgikpyk cswcgkgfsq ktnlhthqrt
      481 htgekpftch ecgkkfnqnc hlikhrrtht geqpytcstc rrnfsrrssl lrhqklhq
//
LOCUS       XP_061008678             357 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 75D-like isoform X3 [Dama dama].
ACCESSION   XP_061008678
VERSION     XP_061008678.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152695.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..357
                     /product="zinc finger protein 75D-like isoform X3"
                     /calculated_mol_wt=40676
     Region          45..133
                     /region_name="SCAN"
                     /note="SCAN domain; pfam02023"
                     /db_xref="CDD:460417"
     Region          236..275
                     /region_name="KRAB_A-box"
                     /note="KRAB (Kruppel-associated box) domain -A box;
                     cd07765"
                     /db_xref="CDD:143639"
     Region          308..349
                     /region_name="KRAB"
                     /note="KRAB box; pfam01352"
                     /db_xref="CDD:460171"
     CDS             1..357
                     /gene="LOC133063388"
                     /coded_by="XM_061152695.1:316..1389"
                     /db_xref="GeneID:133063388"
ORIGIN      
        1 mmtvdlkvae flnpqiralw etkgpvaent sqhkkhapqt dslspershq hfrnflyhea
       61 agprevvdql qelcrrwlrp eihskeqile lvvleqflti lpgdtqtlik khhpqsieea
      121 vvlvehlqse tgqtrngvav qelgkeavll geaaeapgfq lkpaesqpvg msweeelwsi
      181 hqglqeplsr nthkepepvc ervvpahril afpeqtdtkd wtvapevvlp esqslltfee
      241 vamyfsqeew elldptqkal yndvmqenye tvislavpah qllafpeqtn tsewtvapel
      301 ilpesqsllt feevamyfsq eewellnptq kalyndvmqe nyetvislgk vsplhfa
//
LOCUS       XP_061008679             548 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: tigger transposable element-derived protein 7
            [Dama dama].
ACCESSION   XP_061008679
VERSION     XP_061008679.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152696.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..548
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..548
                     /product="LOW QUALITY PROTEIN: tigger transposable
                     element-derived protein 7"
                     /calculated_mol_wt=63047
     Region          4..55
                     /region_name="CENP-B_N"
                     /note="CENP-B N-terminal DNA-binding domain; pfam04218"
                     /db_xref="CDD:461229"
     Region          77..135
                     /region_name="HTH_Tnp_Tc5"
                     /note="Tc5 transposase DNA-binding domain; pfam03221"
                     /db_xref="CDD:460850"
     Region          207..399
                     /region_name="DDE_3"
                     /note="DDE superfamily endonuclease; cl46863"
                     /db_xref="CDD:481203"
     CDS             1..548
                     /gene="TIGD7"
                     /coded_by="XM_061152696.1:423..2069"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon"
                     /db_xref="GeneID:133063389"
ORIGIN      
        1 mnkrgkyttl nleekmkvls rieagrslks vmdefgisks tfydikknkk lildfvlkqd
       61 mplvgaekrk rttgakygdl ddavymwyqq kcsagvpvrg velqaaaekf axclgrtdfk
      121 astgwlfrfr nrhaignrkv caeqvlssas envesfrqkl smlikeeklc laqlysgdem
      181 dlfwksmten tqasrkaicl pgrkinkerl sallcanays thklksiiig ksklpksvke
      241 dtctlpviyk lskdvwftre lfsewffqnf vpevkhfqln vlrfheedvk alllldsspv
      301 hpstelltse dgrikciffp hntstliqpm nqgvilsckr lyrwkqlees lvifeesdde
      361 qekgekvask ikiynpkrav fnwakswdev kqitianawg nllykkehey dlqgledgdy
      421 reifekcrel etklddnrvw fnggeeekgs ppkikggitk kvvqkgakee agefklsavg
      481 ksldylldfv dvthefqrfh ftlkevqqei ikkqfqnrfh srigsflkpr shnikysfsm
      541 pstsgcnn
//
LOCUS       XP_061008681             439 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 174 isoform X1 [Dama dama].
ACCESSION   XP_061008681
VERSION     XP_061008681.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152698.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..439
                     /product="zinc finger protein 174 isoform X1"
                     /calculated_mol_wt=49682
     Region          44..154
                     /region_name="SCAN"
                     /note="leucine rich region; smart00431"
                     /db_xref="CDD:128708"
     Region          <157..306
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          358..380
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          360..380
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(365,367,369,371..372,375..376,379,393,395,399..400,
                     403..404,407,421,423,425,427..428,431..432,435)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          372..395
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          388..408
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(388,391,404,408)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          401..425
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          416..436
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..439
                     /gene="ZNF174"
                     /coded_by="XM_061152698.1:369..1688"
                     /db_xref="GeneID:133063390"
ORIGIN      
        1 maakmeitls sqshiqassk qerhiiakle ekrepplqkd wpdpelsrqs frrfcyqeas
       61 gpqealshlr qlcrqwlqpe vhtkeqilel lvleqflnil paeiqararh rcpvsskeiv
      121 tlvedfhraa kgpkqwvavc megqkvllek tgsqleeqel pdfqpqtprr hpreetsqag
      181 sqdqpspspr hwekslllqe ptsrlaetgd lpnpgikprs palqvdslpa epqgkpgsye
      241 tprmksdnke npqqegakga kpgalsvgrp kgsglqspep rgaslseprl sqrqvsapsa
      301 qkpfahyqrh creleyigap lkshplrelk kskgsrrsls srlqrlshqp arsakkpykc
      361 decgksftwn selkrhqrvh tgerpytcge cgncfgrqst lklhqrihtg ekpyqcgqcg
      421 ksfrqssnlh qhyrlhhgd
//
LOCUS       XP_061008682             408 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 174 isoform X2 [Dama dama].
ACCESSION   XP_061008682
VERSION     XP_061008682.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152699.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..408
                     /product="zinc finger protein 174 isoform X2"
                     /calculated_mol_wt=46514
     Region          44..154
                     /region_name="SCAN"
                     /note="leucine rich region; smart00431"
                     /db_xref="CDD:128708"
     Region          327..349
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          329..349
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(334,336,338,340..341,344..345,348,362,364,368..369,
                     372..373,376,390,392,394,396..397,400..401,404)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          341..364
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          357..377
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(357,360,373,377)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          370..394
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          385..405
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..408
                     /gene="ZNF174"
                     /coded_by="XM_061152699.1:731..1957"
                     /db_xref="GeneID:133063390"
ORIGIN      
        1 maakmeitls sqshiqassk qerhiiakle ekrepplqkd wpdpelsrqs frrfcyqeas
       61 gpqealshlr qlcrqwlqpe vhtkeqilel lvleqflnil paeiqararh rcpvsskeiv
      121 tlvedfhraa kgpkqwvavc megqkvllek tgsqleeqel pdfqpqtprr hpreetsqag
      181 sqdqpspspr hwekslllqe ptsrlaetet prmksdnken pqqegakgak pgalsvgrpk
      241 gsglqspepr gaslseprls qrqvsapsaq kpfahyqrhc releyigapl kshplrelkk
      301 skgsrrslss rlqrlshqpa rsakkpykcd ecgksftwns elkrhqrvht gerpytcgec
      361 gncfgrqstl klhqrihtge kpyqcgqcgk sfrqssnlhq hyrlhhgd
//
LOCUS       XP_061008683             234 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 174 isoform X3 [Dama dama].
ACCESSION   XP_061008683
VERSION     XP_061008683.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152700.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..234
                     /product="zinc finger protein 174 isoform X3"
                     /calculated_mol_wt=27036
     Region          44..154
                     /region_name="SCAN"
                     /note="leucine rich region; smart00431"
                     /db_xref="CDD:128708"
     CDS             1..234
                     /gene="ZNF174"
                     /coded_by="XM_061152700.1:731..1435"
                     /db_xref="GeneID:133063390"
ORIGIN      
        1 maakmeitls sqshiqassk qerhiiakle ekrepplqkd wpdpelsrqs frrfcyqeas
       61 gpqealshlr qlcrqwlqpe vhtkeqilel lvleqflnil paeiqararh rcpvsskeiv
      121 tlvedfhraa kgpkqwvavc megqkvllek tgsqleeqel pdfqpqtprr hpreetsqag
      181 sqdqpspspr hwekslllqe ptsrlaetel limktnshmt tdelpfklwl sfit
//
LOCUS       XP_061008684             242 aa            linear   MAM 02-DEC-2023
DEFINITION  N-alpha-acetyltransferase 60 [Dama dama].
ACCESSION   XP_061008684
VERSION     XP_061008684.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152701.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..242
                     /product="N-alpha-acetyltransferase 60"
                     /calculated_mol_wt=27353
     Region          23..155
                     /region_name="Acetyltransf_1"
                     /note="Acetyltransferase (GNAT) family; pfam00583"
                     /db_xref="CDD:395465"
     Region          92..171
                     /region_name="RimI"
                     /note="Ribosomal protein S18 acetylase RimI and related
                     acetyltransferases [Translation, ribosomal structure and
                     biogenesis]; COG0456"
                     /db_xref="CDD:440224"
     Region          <139..>223
                     /region_name="TIM-like beta/alpha barrel domains"
                     /note="A large family of domains similar to triose
                     phosphate isomerase (TIM) which, in general, share an
                     eight beta/alpha closed barrel structure; cl21457"
                     /db_xref="CDD:473867"
     CDS             1..242
                     /gene="NAA60"
                     /coded_by="XM_061152701.1:157..885"
                     /db_xref="GeneID:133063393"
ORIGIN      
        1 mteavpssal sevslrllch ddidtvkhlc gdwfpieypd swyrditsnk kffslaatyr
       61 gdivgmivae iknrtkihke dgdilastfs ldtqvayils lgvvkefrkh gigslllesl
      121 kdhisttaqd hckaiylhvl ttnntainfy enrdfkqhhy lpyyysirgv lkdgftyvly
      181 ingghppwti ldyiqhlgsa lanlspcsip hriyrqaqsl lcsflpwssi sakggieysr
      241 tm
//
LOCUS       XP_061008685            1173 aa            linear   MAM 02-DEC-2023
DEFINITION  NLR family CARD domain-containing protein 3 isoform X1 [Dama dama].
ACCESSION   XP_061008685
VERSION     XP_061008685.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152702.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1173
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1173
                     /product="NLR family CARD domain-containing protein 3
                     isoform X1"
                     /calculated_mol_wt=125718
     Region          <21..199
                     /region_name="PHA03378"
                     /note="EBNA-3B; Provisional"
                     /db_xref="CDD:223065"
     Region          247..413
                     /region_name="NACHT"
                     /note="NACHT domain; pfam05729"
                     /db_xref="CDD:428606"
     Region          503..561
                     /region_name="NOD2_WH"
                     /note="NOD2 winged helix domain; pfam17779"
                     /db_xref="CDD:465501"
     Region          563..690
                     /region_name="NLRC4_HD2"
                     /note="NLRC4 helical domain HD2; pfam17776"
                     /db_xref="CDD:465499"
     Region          744..775
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          774..1163
                     /region_name="RNA1"
                     /note="Ran GTPase-activating protein (RanGAP) involved in
                     mRNA processing and transport [Translation, ribosomal
                     structure and biogenesis]; COG5238"
                     /db_xref="CDD:444072"
     Region          777..803
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          804..831
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          832..859
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          860..887
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          888..913
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          916..943
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          944..971
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          972..999
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1000..1027
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1056..1083
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1084..1104
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1112..1139
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1140..1159
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1173
                     /gene="NLRC3"
                     /coded_by="XM_061152702.1:389..3910"
                     /db_xref="GeneID:133063394"
ORIGIN      
        1 mrtprhrelr rpvqchtdge wqssdsspgs papgdapgsr aycghpgpnp swrpdrgpaa
       61 rhpgrergwa fippgprglv tcprplgrtt eaagpglspq platvpdsmr kqelrpcgea
      121 gqghaasspa eqvkalvdll agkggqgsqa pqppnrtpec plkphgndlr iqrhrealls
      181 rtgggpelgs psprltslll vegltdlqlr ehdftqveat rggwcsakti tldrlflpls
      241 rvsipprisi tigvagvgkt tlvrnfvhlw argqvgkdfs lvlpltfrdl ntheklsadr
      301 llrsvfphag eaglasaals kallvldgld ecktpldfsn tvactdpkke iqvdhlitni
      361 irgnlfpevs vwitsrpgaa gqipgglvdr mteirgfsee eiktcleqmf pedpvltgwv
      421 lsqvqadral ylmctvpafc rlagaalghl hrhrpgppda elwpprtlce lyswyfrmal
      481 ggegqektka sprieqlahs grklvgtlgr lafhglvrkk yvfyepdlkv lgvdltllqt
      541 alcsrflqre etlasaaayc fthlslqefv aaayycsask raifdlfteg gvswprlgfl
      601 thfrsaaqra mqaedgrldv flrflsglls prvnallags lltqgehqgy raqvaellqg
      661 clrpdvavca ravnvlhclr elqhielars vegavasggl arltspphra alayllqvsd
      721 vctpeaplal rlgpgvlqsl lpqllycrsl rldtnqlqdp vmdllgsvls gkdcriqris
      781 laenqisnkg akalarsllv nrslttldlr snsigpqgak aladalkinr tlaslslqsn
      841 rirddgarsm aealaanril cvlhlqknsi gpvgtqqmad alkqnrslke lmfssnsigd
      901 ggakalaeal mvnqglksld lqsnsisdpg vaalmgalct nqtllslnlr ensispegaq
      961 dlaralrtns tlrsldltan llhdqgaqav aeavrenral tslhlqwnfi qagaakalgq
     1021 alqlntslts ldlqenaigd egasavasal kvntaltaly lqvasigapg aqalgealav
     1081 nrtleildlr gntievagak alanalkvns slqrlnlqen slgmegaicv atalsgnhgl
     1141 rhinlqgnhi gesgarmise aiktnaplct vem
//
LOCUS       XP_061008687            1173 aa            linear   MAM 02-DEC-2023
DEFINITION  NLR family CARD domain-containing protein 3 isoform X1 [Dama dama].
ACCESSION   XP_061008687
VERSION     XP_061008687.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152704.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1173
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1173
                     /product="NLR family CARD domain-containing protein 3
                     isoform X1"
                     /calculated_mol_wt=125718
     Region          <21..199
                     /region_name="PHA03378"
                     /note="EBNA-3B; Provisional"
                     /db_xref="CDD:223065"
     Region          247..413
                     /region_name="NACHT"
                     /note="NACHT domain; pfam05729"
                     /db_xref="CDD:428606"
     Region          503..561
                     /region_name="NOD2_WH"
                     /note="NOD2 winged helix domain; pfam17779"
                     /db_xref="CDD:465501"
     Region          563..690
                     /region_name="NLRC4_HD2"
                     /note="NLRC4 helical domain HD2; pfam17776"
                     /db_xref="CDD:465499"
     Region          744..775
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          774..1163
                     /region_name="RNA1"
                     /note="Ran GTPase-activating protein (RanGAP) involved in
                     mRNA processing and transport [Translation, ribosomal
                     structure and biogenesis]; COG5238"
                     /db_xref="CDD:444072"
     Region          777..803
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          804..831
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          832..859
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          860..887
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          888..913
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          916..943
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          944..971
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          972..999
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1000..1027
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1056..1083
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1084..1104
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1112..1139
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1140..1159
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1173
                     /gene="NLRC3"
                     /coded_by="XM_061152704.1:651..4172"
                     /db_xref="GeneID:133063394"
ORIGIN      
        1 mrtprhrelr rpvqchtdge wqssdsspgs papgdapgsr aycghpgpnp swrpdrgpaa
       61 rhpgrergwa fippgprglv tcprplgrtt eaagpglspq platvpdsmr kqelrpcgea
      121 gqghaasspa eqvkalvdll agkggqgsqa pqppnrtpec plkphgndlr iqrhrealls
      181 rtgggpelgs psprltslll vegltdlqlr ehdftqveat rggwcsakti tldrlflpls
      241 rvsipprisi tigvagvgkt tlvrnfvhlw argqvgkdfs lvlpltfrdl ntheklsadr
      301 llrsvfphag eaglasaals kallvldgld ecktpldfsn tvactdpkke iqvdhlitni
      361 irgnlfpevs vwitsrpgaa gqipgglvdr mteirgfsee eiktcleqmf pedpvltgwv
      421 lsqvqadral ylmctvpafc rlagaalghl hrhrpgppda elwpprtlce lyswyfrmal
      481 ggegqektka sprieqlahs grklvgtlgr lafhglvrkk yvfyepdlkv lgvdltllqt
      541 alcsrflqre etlasaaayc fthlslqefv aaayycsask raifdlfteg gvswprlgfl
      601 thfrsaaqra mqaedgrldv flrflsglls prvnallags lltqgehqgy raqvaellqg
      661 clrpdvavca ravnvlhclr elqhielars vegavasggl arltspphra alayllqvsd
      721 vctpeaplal rlgpgvlqsl lpqllycrsl rldtnqlqdp vmdllgsvls gkdcriqris
      781 laenqisnkg akalarsllv nrslttldlr snsigpqgak aladalkinr tlaslslqsn
      841 rirddgarsm aealaanril cvlhlqknsi gpvgtqqmad alkqnrslke lmfssnsigd
      901 ggakalaeal mvnqglksld lqsnsisdpg vaalmgalct nqtllslnlr ensispegaq
      961 dlaralrtns tlrsldltan llhdqgaqav aeavrenral tslhlqwnfi qagaakalgq
     1021 alqlntslts ldlqenaigd egasavasal kvntaltaly lqvasigapg aqalgealav
     1081 nrtleildlr gntievagak alanalkvns slqrlnlqen slgmegaicv atalsgnhgl
     1141 rhinlqgnhi gesgarmise aiktnaplct vem
//
LOCUS       XP_061008688            1173 aa            linear   MAM 02-DEC-2023
DEFINITION  NLR family CARD domain-containing protein 3 isoform X1 [Dama dama].
ACCESSION   XP_061008688
VERSION     XP_061008688.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152705.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1173
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1173
                     /product="NLR family CARD domain-containing protein 3
                     isoform X1"
                     /calculated_mol_wt=125718
     Region          <21..199
                     /region_name="PHA03378"
                     /note="EBNA-3B; Provisional"
                     /db_xref="CDD:223065"
     Region          247..413
                     /region_name="NACHT"
                     /note="NACHT domain; pfam05729"
                     /db_xref="CDD:428606"
     Region          503..561
                     /region_name="NOD2_WH"
                     /note="NOD2 winged helix domain; pfam17779"
                     /db_xref="CDD:465501"
     Region          563..690
                     /region_name="NLRC4_HD2"
                     /note="NLRC4 helical domain HD2; pfam17776"
                     /db_xref="CDD:465499"
     Region          744..775
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          774..1163
                     /region_name="RNA1"
                     /note="Ran GTPase-activating protein (RanGAP) involved in
                     mRNA processing and transport [Translation, ribosomal
                     structure and biogenesis]; COG5238"
                     /db_xref="CDD:444072"
     Region          777..803
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          804..831
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          832..859
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          860..887
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          888..913
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          916..943
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          944..971
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          972..999
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1000..1027
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1056..1083
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1084..1104
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1112..1139
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1140..1159
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1173
                     /gene="NLRC3"
                     /coded_by="XM_061152705.1:401..3922"
                     /db_xref="GeneID:133063394"
ORIGIN      
        1 mrtprhrelr rpvqchtdge wqssdsspgs papgdapgsr aycghpgpnp swrpdrgpaa
       61 rhpgrergwa fippgprglv tcprplgrtt eaagpglspq platvpdsmr kqelrpcgea
      121 gqghaasspa eqvkalvdll agkggqgsqa pqppnrtpec plkphgndlr iqrhrealls
      181 rtgggpelgs psprltslll vegltdlqlr ehdftqveat rggwcsakti tldrlflpls
      241 rvsipprisi tigvagvgkt tlvrnfvhlw argqvgkdfs lvlpltfrdl ntheklsadr
      301 llrsvfphag eaglasaals kallvldgld ecktpldfsn tvactdpkke iqvdhlitni
      361 irgnlfpevs vwitsrpgaa gqipgglvdr mteirgfsee eiktcleqmf pedpvltgwv
      421 lsqvqadral ylmctvpafc rlagaalghl hrhrpgppda elwpprtlce lyswyfrmal
      481 ggegqektka sprieqlahs grklvgtlgr lafhglvrkk yvfyepdlkv lgvdltllqt
      541 alcsrflqre etlasaaayc fthlslqefv aaayycsask raifdlfteg gvswprlgfl
      601 thfrsaaqra mqaedgrldv flrflsglls prvnallags lltqgehqgy raqvaellqg
      661 clrpdvavca ravnvlhclr elqhielars vegavasggl arltspphra alayllqvsd
      721 vctpeaplal rlgpgvlqsl lpqllycrsl rldtnqlqdp vmdllgsvls gkdcriqris
      781 laenqisnkg akalarsllv nrslttldlr snsigpqgak aladalkinr tlaslslqsn
      841 rirddgarsm aealaanril cvlhlqknsi gpvgtqqmad alkqnrslke lmfssnsigd
      901 ggakalaeal mvnqglksld lqsnsisdpg vaalmgalct nqtllslnlr ensispegaq
      961 dlaralrtns tlrsldltan llhdqgaqav aeavrenral tslhlqwnfi qagaakalgq
     1021 alqlntslts ldlqenaigd egasavasal kvntaltaly lqvasigapg aqalgealav
     1081 nrtleildlr gntievagak alanalkvns slqrlnlqen slgmegaicv atalsgnhgl
     1141 rhinlqgnhi gesgarmise aiktnaplct vem
//
LOCUS       XP_061008689            1173 aa            linear   MAM 02-DEC-2023
DEFINITION  NLR family CARD domain-containing protein 3 isoform X1 [Dama dama].
ACCESSION   XP_061008689
VERSION     XP_061008689.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152706.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1173
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1173
                     /product="NLR family CARD domain-containing protein 3
                     isoform X1"
                     /calculated_mol_wt=125718
     Region          <21..199
                     /region_name="PHA03378"
                     /note="EBNA-3B; Provisional"
                     /db_xref="CDD:223065"
     Region          247..413
                     /region_name="NACHT"
                     /note="NACHT domain; pfam05729"
                     /db_xref="CDD:428606"
     Region          503..561
                     /region_name="NOD2_WH"
                     /note="NOD2 winged helix domain; pfam17779"
                     /db_xref="CDD:465501"
     Region          563..690
                     /region_name="NLRC4_HD2"
                     /note="NLRC4 helical domain HD2; pfam17776"
                     /db_xref="CDD:465499"
     Region          744..775
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          774..1163
                     /region_name="RNA1"
                     /note="Ran GTPase-activating protein (RanGAP) involved in
                     mRNA processing and transport [Translation, ribosomal
                     structure and biogenesis]; COG5238"
                     /db_xref="CDD:444072"
     Region          777..803
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          804..831
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          832..859
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          860..887
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          888..913
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          916..943
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          944..971
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          972..999
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1000..1027
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1056..1083
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1084..1104
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1112..1139
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1140..1159
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1173
                     /gene="NLRC3"
                     /coded_by="XM_061152706.1:453..3974"
                     /db_xref="GeneID:133063394"
ORIGIN      
        1 mrtprhrelr rpvqchtdge wqssdsspgs papgdapgsr aycghpgpnp swrpdrgpaa
       61 rhpgrergwa fippgprglv tcprplgrtt eaagpglspq platvpdsmr kqelrpcgea
      121 gqghaasspa eqvkalvdll agkggqgsqa pqppnrtpec plkphgndlr iqrhrealls
      181 rtgggpelgs psprltslll vegltdlqlr ehdftqveat rggwcsakti tldrlflpls
      241 rvsipprisi tigvagvgkt tlvrnfvhlw argqvgkdfs lvlpltfrdl ntheklsadr
      301 llrsvfphag eaglasaals kallvldgld ecktpldfsn tvactdpkke iqvdhlitni
      361 irgnlfpevs vwitsrpgaa gqipgglvdr mteirgfsee eiktcleqmf pedpvltgwv
      421 lsqvqadral ylmctvpafc rlagaalghl hrhrpgppda elwpprtlce lyswyfrmal
      481 ggegqektka sprieqlahs grklvgtlgr lafhglvrkk yvfyepdlkv lgvdltllqt
      541 alcsrflqre etlasaaayc fthlslqefv aaayycsask raifdlfteg gvswprlgfl
      601 thfrsaaqra mqaedgrldv flrflsglls prvnallags lltqgehqgy raqvaellqg
      661 clrpdvavca ravnvlhclr elqhielars vegavasggl arltspphra alayllqvsd
      721 vctpeaplal rlgpgvlqsl lpqllycrsl rldtnqlqdp vmdllgsvls gkdcriqris
      781 laenqisnkg akalarsllv nrslttldlr snsigpqgak aladalkinr tlaslslqsn
      841 rirddgarsm aealaanril cvlhlqknsi gpvgtqqmad alkqnrslke lmfssnsigd
      901 ggakalaeal mvnqglksld lqsnsisdpg vaalmgalct nqtllslnlr ensispegaq
      961 dlaralrtns tlrsldltan llhdqgaqav aeavrenral tslhlqwnfi qagaakalgq
     1021 alqlntslts ldlqenaigd egasavasal kvntaltaly lqvasigapg aqalgealav
     1081 nrtleildlr gntievagak alanalkvns slqrlnlqen slgmegaicv atalsgnhgl
     1141 rhinlqgnhi gesgarmise aiktnaplct vem
//
LOCUS       XP_061008690            1117 aa            linear   MAM 02-DEC-2023
DEFINITION  NLR family CARD domain-containing protein 3 isoform X2 [Dama dama].
ACCESSION   XP_061008690
VERSION     XP_061008690.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152707.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1117
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1117
                     /product="NLR family CARD domain-containing protein 3
                     isoform X2"
                     /calculated_mol_wt=119629
     Region          <21..199
                     /region_name="PHA03378"
                     /note="EBNA-3B; Provisional"
                     /db_xref="CDD:223065"
     Region          247..413
                     /region_name="NACHT"
                     /note="NACHT domain; pfam05729"
                     /db_xref="CDD:428606"
     Region          503..561
                     /region_name="NOD2_WH"
                     /note="NOD2 winged helix domain; pfam17779"
                     /db_xref="CDD:465501"
     Region          563..690
                     /region_name="NLRC4_HD2"
                     /note="NLRC4 helical domain HD2; pfam17776"
                     /db_xref="CDD:465499"
     Region          <736..1022
                     /region_name="RNA1"
                     /note="Ran GTPase-activating protein (RanGAP) involved in
                     mRNA processing and transport [Translation, ribosomal
                     structure and biogenesis]; COG5238"
                     /db_xref="CDD:444072"
     Region          747..771
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          777..803
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          804..831
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          832..859
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          860..885
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          888..908
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          916..943
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          972..999
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1000..1027
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1026..1094
                     /region_name="LRR_8"
                     /note="Leucine rich repeat; pfam13855"
                     /db_xref="CDD:404697"
     Region          1028..1055
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1056..1083
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1084..1103
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1117
                     /gene="NLRC3"
                     /coded_by="XM_061152707.1:389..3742"
                     /db_xref="GeneID:133063394"
ORIGIN      
        1 mrtprhrelr rpvqchtdge wqssdsspgs papgdapgsr aycghpgpnp swrpdrgpaa
       61 rhpgrergwa fippgprglv tcprplgrtt eaagpglspq platvpdsmr kqelrpcgea
      121 gqghaasspa eqvkalvdll agkggqgsqa pqppnrtpec plkphgndlr iqrhrealls
      181 rtgggpelgs psprltslll vegltdlqlr ehdftqveat rggwcsakti tldrlflpls
      241 rvsipprisi tigvagvgkt tlvrnfvhlw argqvgkdfs lvlpltfrdl ntheklsadr
      301 llrsvfphag eaglasaals kallvldgld ecktpldfsn tvactdpkke iqvdhlitni
      361 irgnlfpevs vwitsrpgaa gqipgglvdr mteirgfsee eiktcleqmf pedpvltgwv
      421 lsqvqadral ylmctvpafc rlagaalghl hrhrpgppda elwpprtlce lyswyfrmal
      481 ggegqektka sprieqlahs grklvgtlgr lafhglvrkk yvfyepdlkv lgvdltllqt
      541 alcsrflqre etlasaaayc fthlslqefv aaayycsask raifdlfteg gvswprlgfl
      601 thfrsaaqra mqaedgrldv flrflsglls prvnallags lltqgehqgy raqvaellqg
      661 clrpdvavca ravnvlhclr elqhielars vegavasggl arltspphra alayllqvsd
      721 vctpeaplal rlgpgvlqsl lpqllycrsl rldtnqlqdp vmdllgsvls gkdcriqris
      781 laenqisnkg akalarsllv nrslttldlr snsigpqgak aladalkinr tlaslrfssn
      841 sigdggakal aealmvnqgl ksldlqsnsi sdpgvaalmg alctnqtlls lnlrensisp
      901 egaqdlaral rtnstlrsld ltanllhdqg aqavaeavre nraltslhlq wnfiqagaak
      961 algqalqlnt sltsldlqen aigdegasav asalkvntal talylqvasi gapgaqalge
     1021 alavnrtlei ldlrgntiev agakalanal kvnsslqrln lqenslgmeg aicvatalsg
     1081 nhglrhinlq gnhigesgar miseaiktna plctvem
//
LOCUS       XP_061008691            1065 aa            linear   MAM 02-DEC-2023
DEFINITION  NLR family CARD domain-containing protein 3 isoform X3 [Dama dama].
ACCESSION   XP_061008691
VERSION     XP_061008691.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152708.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1065
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1065
                     /product="NLR family CARD domain-containing protein 3
                     isoform X3"
                     /calculated_mol_wt=114238
     Region          139..305
                     /region_name="NACHT"
                     /note="NACHT domain; pfam05729"
                     /db_xref="CDD:428606"
     Region          395..453
                     /region_name="NOD2_WH"
                     /note="NOD2 winged helix domain; pfam17779"
                     /db_xref="CDD:465501"
     Region          455..582
                     /region_name="NLRC4_HD2"
                     /note="NLRC4 helical domain HD2; pfam17776"
                     /db_xref="CDD:465499"
     Region          636..667
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          666..1055
                     /region_name="RNA1"
                     /note="Ran GTPase-activating protein (RanGAP) involved in
                     mRNA processing and transport [Translation, ribosomal
                     structure and biogenesis]; COG5238"
                     /db_xref="CDD:444072"
     Region          669..695
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          696..723
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          724..751
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          752..779
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          780..805
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          808..835
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          836..863
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          864..891
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          892..919
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          948..975
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          976..996
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1004..1031
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1032..1051
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1065
                     /gene="NLRC3"
                     /coded_by="XM_061152708.1:468..3665"
                     /db_xref="GeneID:133063394"
ORIGIN      
        1 mrkqelrpcg eagqghaass paeqvkalvd llagkggqgs qapqppnrtp ecplkphgnd
       61 lriqrhreal lsrtgggpel gspsprltsl llvegltdlq lrehdftqve atrggwcsak
      121 titldrlflp lsrvsippri sitigvagvg kttlvrnfvh lwargqvgkd fslvlpltfr
      181 dlntheklsa drllrsvfph ageaglasaa lskallvldg ldecktpldf sntvactdpk
      241 keiqvdhlit niirgnlfpe vsvwitsrpg aagqipgglv drmteirgfs eeeiktcleq
      301 mfpedpvltg wvlsqvqadr alylmctvpa fcrlagaalg hlhrhrpgpp daelwpprtl
      361 celyswyfrm alggegqekt kasprieqla hsgrklvgtl grlafhglvr kkyvfyepdl
      421 kvlgvdltll qtalcsrflq reetlasaaa ycfthlslqe fvaaayycsa skraifdlft
      481 eggvswprlg flthfrsaaq ramqaedgrl dvflrflsgl lsprvnalla gslltqgehq
      541 gyraqvaell qgclrpdvav caravnvlhc lrelqhiela rsvegavasg glarltspph
      601 raalayllqv sdvctpeapl alrlgpgvlq sllpqllycr slrldtnqlq dpvmdllgsv
      661 lsgkdcriqr islaenqisn kgakalarsl lvnrslttld lrsnsigpqg akaladalki
      721 nrtlaslslq snrirddgar smaealaanr ilcvlhlqkn sigpvgtqqm adalkqnrsl
      781 kelmfssnsi gdggakalae almvnqglks ldlqsnsisd pgvaalmgal ctnqtllsln
      841 lrensispeg aqdlaralrt nstlrsldlt anllhdqgaq avaeavrenr altslhlqwn
      901 fiqagaakal gqalqlntsl tsldlqenai gdegasavas alkvntalta lylqvasiga
      961 pgaqalgeal avnrtleild lrgntievag akalanalkv nsslqrlnlq enslgmegai
     1021 cvatalsgnh glrhinlqgn higesgarmi seaiktnapl ctvem
//
LOCUS       XP_061008692            1065 aa            linear   MAM 02-DEC-2023
DEFINITION  NLR family CARD domain-containing protein 3 isoform X3 [Dama dama].
ACCESSION   XP_061008692
VERSION     XP_061008692.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152709.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1065
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1065
                     /product="NLR family CARD domain-containing protein 3
                     isoform X3"
                     /calculated_mol_wt=114238
     Region          139..305
                     /region_name="NACHT"
                     /note="NACHT domain; pfam05729"
                     /db_xref="CDD:428606"
     Region          395..453
                     /region_name="NOD2_WH"
                     /note="NOD2 winged helix domain; pfam17779"
                     /db_xref="CDD:465501"
     Region          455..582
                     /region_name="NLRC4_HD2"
                     /note="NLRC4 helical domain HD2; pfam17776"
                     /db_xref="CDD:465499"
     Region          636..667
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          666..1055
                     /region_name="RNA1"
                     /note="Ran GTPase-activating protein (RanGAP) involved in
                     mRNA processing and transport [Translation, ribosomal
                     structure and biogenesis]; COG5238"
                     /db_xref="CDD:444072"
     Region          669..695
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          696..723
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          724..751
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          752..779
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          780..805
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          808..835
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          836..863
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          864..891
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          892..919
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          948..975
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          976..996
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1004..1031
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1032..1051
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1065
                     /gene="NLRC3"
                     /coded_by="XM_061152709.1:480..3677"
                     /db_xref="GeneID:133063394"
ORIGIN      
        1 mrkqelrpcg eagqghaass paeqvkalvd llagkggqgs qapqppnrtp ecplkphgnd
       61 lriqrhreal lsrtgggpel gspsprltsl llvegltdlq lrehdftqve atrggwcsak
      121 titldrlflp lsrvsippri sitigvagvg kttlvrnfvh lwargqvgkd fslvlpltfr
      181 dlntheklsa drllrsvfph ageaglasaa lskallvldg ldecktpldf sntvactdpk
      241 keiqvdhlit niirgnlfpe vsvwitsrpg aagqipgglv drmteirgfs eeeiktcleq
      301 mfpedpvltg wvlsqvqadr alylmctvpa fcrlagaalg hlhrhrpgpp daelwpprtl
      361 celyswyfrm alggegqekt kasprieqla hsgrklvgtl grlafhglvr kkyvfyepdl
      421 kvlgvdltll qtalcsrflq reetlasaaa ycfthlslqe fvaaayycsa skraifdlft
      481 eggvswprlg flthfrsaaq ramqaedgrl dvflrflsgl lsprvnalla gslltqgehq
      541 gyraqvaell qgclrpdvav caravnvlhc lrelqhiela rsvegavasg glarltspph
      601 raalayllqv sdvctpeapl alrlgpgvlq sllpqllycr slrldtnqlq dpvmdllgsv
      661 lsgkdcriqr islaenqisn kgakalarsl lvnrslttld lrsnsigpqg akaladalki
      721 nrtlaslslq snrirddgar smaealaanr ilcvlhlqkn sigpvgtqqm adalkqnrsl
      781 kelmfssnsi gdggakalae almvnqglks ldlqsnsisd pgvaalmgal ctnqtllsln
      841 lrensispeg aqdlaralrt nstlrsldlt anllhdqgaq avaeavrenr altslhlqwn
      901 fiqagaakal gqalqlntsl tsldlqenai gdegasavas alkvntalta lylqvasiga
      961 pgaqalgeal avnrtleild lrgntievag akalanalkv nsslqrlnlq enslgmegai
     1021 cvatalsgnh glrhinlqgn higesgarmi seaiktnapl ctvem
//
LOCUS       XP_061008693             703 aa            linear   MAM 02-DEC-2023
DEFINITION  heat shock protein 75 kDa, mitochondrial [Dama dama].
ACCESSION   XP_061008693
VERSION     XP_061008693.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152710.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..703
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..703
                     /product="heat shock protein 75 kDa, mitochondrial"
                     /calculated_mol_wt=79112
     Region          83..701
                     /region_name="PRK05218"
                     /note="heat shock protein 90; Provisional"
                     /db_xref="CDD:235366"
     CDS             1..703
                     /gene="TRAP1"
                     /coded_by="XM_061152710.1:40..2151"
                     /db_xref="GeneID:133063395"
ORIGIN      
        1 marelrtlll wgrrlrapal aaacggkpvl cpwrppaqsw gprqslassf hvgqpfssqa
       61 aedqaeagpl hsiisssetv qgsatkhefq aetkklldiv arslysekev firelisnas
      121 daleklrhkl vsegqalpdm eihlqtdadr gtitiqdtgv gmsreelvsn lgtiarsgsk
      181 afldalqsqa eaggkiigqf gvgfysafmv adrvevyscs vdagspgyrw lsdgsgvfev
      241 aeasgvrtgt kiiihlkads refasearvr dvvtkysnfv sfplylngrr mntlqaiwmm
      301 dpkdvgegqh eefyryiaqa hdrprytlhy rtdaplsirs ifyvpdakps mfdvsrelgs
      361 svslysrkvl iqtkatnilp awlrfvrgvv dsediplnls rellqesvli rklqgvlqqr
      421 likffidqsk kdaekyakff edyglfvreg ivttaeqevk ediakllrye ssalpagqlt
      481 slpdyagrmq agtrniyylc apsrhlaehs pyyeamkrkn tevlfcyeqf deltllhlre
      541 fdkkklisve tdivvdhyke ekfedgapag drlseketed lmawmrnalg srvtdvkvtl
      601 rldthpamit vlemgaarhf lrmrqlaktq eeraqllqpt leinprhili kklsqlrdse
      661 pdlaqllvdq iyenamitag lvddprpmvg rlnhllvkal erh
//
LOCUS       XP_061008694             457 aa            linear   MAM 02-DEC-2023
DEFINITION  clusterin-associated protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061008694
VERSION     XP_061008694.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152711.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..457
                     /product="clusterin-associated protein 1 isoform X1"
                     /calculated_mol_wt=52004
     Region          33..302
                     /region_name="Cluap1"
                     /note="Clusterin-associated protein-1; pfam10234"
                     /db_xref="CDD:463013"
     CDS             1..457
                     /gene="CLUAP1"
                     /coded_by="XM_061152711.1:255..1628"
                     /db_xref="GeneID:133063396"
ORIGIN      
        1 mcegslhatp appasrftpp agrprsdfte mmralgyprh ismenfrtpn fglvsevllw
       61 lvkryepqnd ipsdveteqd rvffikaiaq fmatkahikl ntkklyqadg yavkellkit
      121 svlynamktk gmegsklgee dvskfkfdlg skiadlkaar qlaseitskg aslydllgke
      181 velrelrtea varpleinet ekvmkiaikd ilaqvqktkd llnnvasdea nleakiekrk
      241 lelernrkrl qtlqsvrpaf mdeyekieee lqkqyeiyle kfrnlayleq qledhhrmeq
      301 erfeetentl rlmqnklkee gkrvlksgsq pgvhdaalsd kpawsvspse rpstgnddsd
      361 idiqeddesd sdveerrlsk lhtamevlmq gqpskrvvgt mqggdtddde dledseidme
      421 ddeedddled esvalspakp srrgrkpepl desdsdf
//
LOCUS       XP_061008695             438 aa            linear   MAM 02-DEC-2023
DEFINITION  clusterin-associated protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061008695
VERSION     XP_061008695.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152712.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..438
                     /product="clusterin-associated protein 1 isoform X2"
                     /calculated_mol_wt=50235
     Region          14..283
                     /region_name="Cluap1"
                     /note="Clusterin-associated protein-1; pfam10234"
                     /db_xref="CDD:463013"
     CDS             1..438
                     /gene="CLUAP1"
                     /coded_by="XM_061152712.1:131..1447"
                     /db_xref="GeneID:133063396"
ORIGIN      
        1 msfrdlrnft emmralgypr hismenfrtp nfglvsevll wlvkryepqn dipsdveteq
       61 drvffikaia qfmatkahik lntkklyqad gyavkellki tsvlynamkt kgmegsklge
      121 edvskfkfdl gskiadlkaa rqlaseitsk gaslydllgk evelrelrte avarpleine
      181 tekvmkiaik dilaqvqktk dllnnvasde anleakiekr klelernrkr lqtlqsvrpa
      241 fmdeyekiee elqkqyeiyl ekfrnlayle qqledhhrme qerfeetent lrlmqnklke
      301 egkrvlksgs qpgvhdaals dkpawsvsps erpstgndds didiqeddes dsdveerrls
      361 klhtamevlm qgqpskrvvg tmqggdtddd edledseidm eddeedddle desvalspak
      421 psrrgrkpep ldesdsdf
//
LOCUS       XP_061008697             427 aa            linear   MAM 02-DEC-2023
DEFINITION  clusterin-associated protein 1 isoform X3 [Dama dama].
ACCESSION   XP_061008697
VERSION     XP_061008697.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152714.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..427
                     /product="clusterin-associated protein 1 isoform X3"
                     /calculated_mol_wt=48837
     Region          3..272
                     /region_name="Cluap1"
                     /note="Clusterin-associated protein-1; pfam10234"
                     /db_xref="CDD:463013"
     CDS             1..427
                     /gene="CLUAP1"
                     /coded_by="XM_061152714.1:129..1412"
                     /db_xref="GeneID:133063396"
ORIGIN      
        1 mmralgyprh ismenfrtpn fglvsevllw lvkryepqnd ipsdveteqd rvffikaiaq
       61 fmatkahikl ntkklyqadg yavkellkit svlynamktk gmegsklgee dvskfkfdlg
      121 skiadlkaar qlaseitskg aslydllgke velrelrtea varpleinet ekvmkiaikd
      181 ilaqvqktkd llnnvasdea nleakiekrk lelernrkrl qtlqsvrpaf mdeyekieee
      241 lqkqyeiyle kfrnlayleq qledhhrmeq erfeetentl rlmqnklkee gkrvlksgsq
      301 pgvhdaalsd kpawsvspse rpstgnddsd idiqeddesd sdveerrlsk lhtamevlmq
      361 gqpskrvvgt mqggdtddde dledseidme ddeedddled esvalspakp srrgrkpepl
      421 desdsdf
//
LOCUS       XP_061008698             397 aa            linear   MAM 02-DEC-2023
DEFINITION  clusterin-associated protein 1 isoform X4 [Dama dama].
ACCESSION   XP_061008698
VERSION     XP_061008698.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152715.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..397
                     /product="clusterin-associated protein 1 isoform X4"
                     /calculated_mol_wt=45355
     Region          33..242
                     /region_name="Cluap1"
                     /note="Clusterin-associated protein-1; pfam10234"
                     /db_xref="CDD:463013"
     CDS             1..397
                     /gene="CLUAP1"
                     /coded_by="XM_061152715.1:257..1450"
                     /db_xref="GeneID:133063396"
ORIGIN      
        1 mcegslhatp appasrftpp agrprsdfte mmralgyprh ismenfrtpn fglvsevllw
       61 lvkryepqnd ipsdveteqd rvffikaiaq fmiadlkaar qlaseitskg aslydllgke
      121 velrelrtea varpleinet ekvmkiaikd ilaqvqktkd llnnvasdea nleakiekrk
      181 lelernrkrl qtlqsvrpaf mdeyekieee lqkqyeiyle kfrnlayleq qledhhrmeq
      241 erfeetentl rlmqnklkee gkrvlksgsq pgvhdaalsd kpawsvspse rpstgnddsd
      301 idiqeddesd sdveerrlsk lhtamevlmq gqpskrvvgt mqggdtddde dledseidme
      361 ddeedddled esvalspakp srrgrkpepl desdsdf
//
LOCUS       XP_061008699             282 aa            linear   MAM 02-DEC-2023
DEFINITION  deoxyribonuclease-1 isoform X1 [Dama dama].
ACCESSION   XP_061008699
VERSION     XP_061008699.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152716.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..282
                     /product="deoxyribonuclease-1 isoform X1"
                     /calculated_mol_wt=31074
     Region          25..282
                     /region_name="DNaseIc"
                     /note="deoxyribonuclease I; smart00476"
                     /db_xref="CDD:128752"
     Site            order(29..30,32,61,63..64,100,133,156,190,192,233..234,
                     273..274)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197309"
     Site            order(29,61,100,156,190,192,234,273..274)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197309"
     Site            order(29,61,273)
                     /site_type="other"
                     /note="putative Mg binding site IVb [ion binding]"
                     /db_xref="CDD:197309"
     Site            order(31,156,190,192,274)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197309"
     Site            order(32,63..64,100,133,156,190,192,233,274)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197309"
     Site            order(121,134)
                     /site_type="other"
                     /note="Ca binding site II [ion binding]"
                     /db_xref="CDD:197309"
     Site            order(190,234,274)
                     /site_type="other"
                     /note="putative Mg binding site IVa [ion binding]"
                     /db_xref="CDD:197309"
     Site            order(223,225)
                     /site_type="other"
                     /note="Ca binding site I [ion binding]"
                     /db_xref="CDD:197309"
     CDS             1..282
                     /gene="DNASE1"
                     /coded_by="XM_061152716.1:5281..6129"
                     /db_xref="GeneID:133063397"
ORIGIN      
        1 mrgtrltgll lalagllqlg lsleiaafni rtfgetkmsn atlssyivri vsrydivliq
       61 evrdshlvav gklldrlnqd dpnnyhyvvs eplgrnsyke rylfvfrpnk vsvldtyqyd
      121 dgcescgnds fsrepavvkf sspstkvkef aivalhsaps davaeinsly dvyldvrqkw
      181 dlndimlmgd fnadcsyvts sqwssirlrt ssafqwlipd sadttatstn caydrivvag
      241 sllqssvvpg saapfdfqaa yglsnemala isdhypvevt lt
//
LOCUS       XP_061008700             282 aa            linear   MAM 02-DEC-2023
DEFINITION  deoxyribonuclease-1 isoform X1 [Dama dama].
ACCESSION   XP_061008700
VERSION     XP_061008700.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152717.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..282
                     /product="deoxyribonuclease-1 isoform X1"
                     /calculated_mol_wt=31074
     Region          25..282
                     /region_name="DNaseIc"
                     /note="deoxyribonuclease I; smart00476"
                     /db_xref="CDD:128752"
     Site            order(29..30,32,61,63..64,100,133,156,190,192,233..234,
                     273..274)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197309"
     Site            order(29,61,100,156,190,192,234,273..274)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197309"
     Site            order(29,61,273)
                     /site_type="other"
                     /note="putative Mg binding site IVb [ion binding]"
                     /db_xref="CDD:197309"
     Site            order(31,156,190,192,274)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197309"
     Site            order(32,63..64,100,133,156,190,192,233,274)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197309"
     Site            order(121,134)
                     /site_type="other"
                     /note="Ca binding site II [ion binding]"
                     /db_xref="CDD:197309"
     Site            order(190,234,274)
                     /site_type="other"
                     /note="putative Mg binding site IVa [ion binding]"
                     /db_xref="CDD:197309"
     Site            order(223,225)
                     /site_type="other"
                     /note="Ca binding site I [ion binding]"
                     /db_xref="CDD:197309"
     CDS             1..282
                     /gene="DNASE1"
                     /coded_by="XM_061152717.1:1842..2690"
                     /db_xref="GeneID:133063397"
ORIGIN      
        1 mrgtrltgll lalagllqlg lsleiaafni rtfgetkmsn atlssyivri vsrydivliq
       61 evrdshlvav gklldrlnqd dpnnyhyvvs eplgrnsyke rylfvfrpnk vsvldtyqyd
      121 dgcescgnds fsrepavvkf sspstkvkef aivalhsaps davaeinsly dvyldvrqkw
      181 dlndimlmgd fnadcsyvts sqwssirlrt ssafqwlipd sadttatstn caydrivvag
      241 sllqssvvpg saapfdfqaa yglsnemala isdhypvevt lt
//
LOCUS       XP_061008701             282 aa            linear   MAM 02-DEC-2023
DEFINITION  deoxyribonuclease-1 isoform X1 [Dama dama].
ACCESSION   XP_061008701
VERSION     XP_061008701.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152718.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..282
                     /product="deoxyribonuclease-1 isoform X1"
                     /calculated_mol_wt=31074
     Region          25..282
                     /region_name="DNaseIc"
                     /note="deoxyribonuclease I; smart00476"
                     /db_xref="CDD:128752"
     Site            order(29..30,32,61,63..64,100,133,156,190,192,233..234,
                     273..274)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197309"
     Site            order(29,61,100,156,190,192,234,273..274)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197309"
     Site            order(29,61,273)
                     /site_type="other"
                     /note="putative Mg binding site IVb [ion binding]"
                     /db_xref="CDD:197309"
     Site            order(31,156,190,192,274)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197309"
     Site            order(32,63..64,100,133,156,190,192,233,274)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197309"
     Site            order(121,134)
                     /site_type="other"
                     /note="Ca binding site II [ion binding]"
                     /db_xref="CDD:197309"
     Site            order(190,234,274)
                     /site_type="other"
                     /note="putative Mg binding site IVa [ion binding]"
                     /db_xref="CDD:197309"
     Site            order(223,225)
                     /site_type="other"
                     /note="Ca binding site I [ion binding]"
                     /db_xref="CDD:197309"
     CDS             1..282
                     /gene="DNASE1"
                     /coded_by="XM_061152718.1:1826..2674"
                     /db_xref="GeneID:133063397"
ORIGIN      
        1 mrgtrltgll lalagllqlg lsleiaafni rtfgetkmsn atlssyivri vsrydivliq
       61 evrdshlvav gklldrlnqd dpnnyhyvvs eplgrnsyke rylfvfrpnk vsvldtyqyd
      121 dgcescgnds fsrepavvkf sspstkvkef aivalhsaps davaeinsly dvyldvrqkw
      181 dlndimlmgd fnadcsyvts sqwssirlrt ssafqwlipd sadttatstn caydrivvag
      241 sllqssvvpg saapfdfqaa yglsnemala isdhypvevt lt
//
LOCUS       XP_061008702             282 aa            linear   MAM 02-DEC-2023
DEFINITION  deoxyribonuclease-1 isoform X1 [Dama dama].
ACCESSION   XP_061008702
VERSION     XP_061008702.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152719.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..282
                     /product="deoxyribonuclease-1 isoform X1"
                     /calculated_mol_wt=31074
     Region          25..282
                     /region_name="DNaseIc"
                     /note="deoxyribonuclease I; smart00476"
                     /db_xref="CDD:128752"
     Site            order(29..30,32,61,63..64,100,133,156,190,192,233..234,
                     273..274)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197309"
     Site            order(29,61,100,156,190,192,234,273..274)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197309"
     Site            order(29,61,273)
                     /site_type="other"
                     /note="putative Mg binding site IVb [ion binding]"
                     /db_xref="CDD:197309"
     Site            order(31,156,190,192,274)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197309"
     Site            order(32,63..64,100,133,156,190,192,233,274)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197309"
     Site            order(121,134)
                     /site_type="other"
                     /note="Ca binding site II [ion binding]"
                     /db_xref="CDD:197309"
     Site            order(190,234,274)
                     /site_type="other"
                     /note="putative Mg binding site IVa [ion binding]"
                     /db_xref="CDD:197309"
     Site            order(223,225)
                     /site_type="other"
                     /note="Ca binding site I [ion binding]"
                     /db_xref="CDD:197309"
     CDS             1..282
                     /gene="DNASE1"
                     /coded_by="XM_061152719.1:4754..5602"
                     /db_xref="GeneID:133063397"
ORIGIN      
        1 mrgtrltgll lalagllqlg lsleiaafni rtfgetkmsn atlssyivri vsrydivliq
       61 evrdshlvav gklldrlnqd dpnnyhyvvs eplgrnsyke rylfvfrpnk vsvldtyqyd
      121 dgcescgnds fsrepavvkf sspstkvkef aivalhsaps davaeinsly dvyldvrqkw
      181 dlndimlmgd fnadcsyvts sqwssirlrt ssafqwlipd sadttatstn caydrivvag
      241 sllqssvvpg saapfdfqaa yglsnemala isdhypvevt lt
//
LOCUS       XP_061008703             282 aa            linear   MAM 02-DEC-2023
DEFINITION  deoxyribonuclease-1 isoform X1 [Dama dama].
ACCESSION   XP_061008703
VERSION     XP_061008703.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152720.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..282
                     /product="deoxyribonuclease-1 isoform X1"
                     /calculated_mol_wt=31074
     Region          25..282
                     /region_name="DNaseIc"
                     /note="deoxyribonuclease I; smart00476"
                     /db_xref="CDD:128752"
     Site            order(29..30,32,61,63..64,100,133,156,190,192,233..234,
                     273..274)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197309"
     Site            order(29,61,100,156,190,192,234,273..274)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197309"
     Site            order(29,61,273)
                     /site_type="other"
                     /note="putative Mg binding site IVb [ion binding]"
                     /db_xref="CDD:197309"
     Site            order(31,156,190,192,274)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197309"
     Site            order(32,63..64,100,133,156,190,192,233,274)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197309"
     Site            order(121,134)
                     /site_type="other"
                     /note="Ca binding site II [ion binding]"
                     /db_xref="CDD:197309"
     Site            order(190,234,274)
                     /site_type="other"
                     /note="putative Mg binding site IVa [ion binding]"
                     /db_xref="CDD:197309"
     Site            order(223,225)
                     /site_type="other"
                     /note="Ca binding site I [ion binding]"
                     /db_xref="CDD:197309"
     CDS             1..282
                     /gene="DNASE1"
                     /coded_by="XM_061152720.1:415..1263"
                     /db_xref="GeneID:133063397"
ORIGIN      
        1 mrgtrltgll lalagllqlg lsleiaafni rtfgetkmsn atlssyivri vsrydivliq
       61 evrdshlvav gklldrlnqd dpnnyhyvvs eplgrnsyke rylfvfrpnk vsvldtyqyd
      121 dgcescgnds fsrepavvkf sspstkvkef aivalhsaps davaeinsly dvyldvrqkw
      181 dlndimlmgd fnadcsyvts sqwssirlrt ssafqwlipd sadttatstn caydrivvag
      241 sllqssvvpg saapfdfqaa yglsnemala isdhypvevt lt
//
LOCUS       XP_061008704             282 aa            linear   MAM 02-DEC-2023
DEFINITION  deoxyribonuclease-1 isoform X1 [Dama dama].
ACCESSION   XP_061008704
VERSION     XP_061008704.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152721.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..282
                     /product="deoxyribonuclease-1 isoform X1"
                     /calculated_mol_wt=31074
     Region          25..282
                     /region_name="DNaseIc"
                     /note="deoxyribonuclease I; smart00476"
                     /db_xref="CDD:128752"
     Site            order(29..30,32,61,63..64,100,133,156,190,192,233..234,
                     273..274)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197309"
     Site            order(29,61,100,156,190,192,234,273..274)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197309"
     Site            order(29,61,273)
                     /site_type="other"
                     /note="putative Mg binding site IVb [ion binding]"
                     /db_xref="CDD:197309"
     Site            order(31,156,190,192,274)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197309"
     Site            order(32,63..64,100,133,156,190,192,233,274)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197309"
     Site            order(121,134)
                     /site_type="other"
                     /note="Ca binding site II [ion binding]"
                     /db_xref="CDD:197309"
     Site            order(190,234,274)
                     /site_type="other"
                     /note="putative Mg binding site IVa [ion binding]"
                     /db_xref="CDD:197309"
     Site            order(223,225)
                     /site_type="other"
                     /note="Ca binding site I [ion binding]"
                     /db_xref="CDD:197309"
     CDS             1..282
                     /gene="DNASE1"
                     /coded_by="XM_061152721.1:5093..5941"
                     /db_xref="GeneID:133063397"
ORIGIN      
        1 mrgtrltgll lalagllqlg lsleiaafni rtfgetkmsn atlssyivri vsrydivliq
       61 evrdshlvav gklldrlnqd dpnnyhyvvs eplgrnsyke rylfvfrpnk vsvldtyqyd
      121 dgcescgnds fsrepavvkf sspstkvkef aivalhsaps davaeinsly dvyldvrqkw
      181 dlndimlmgd fnadcsyvts sqwssirlrt ssafqwlipd sadttatstn caydrivvag
      241 sllqssvvpg saapfdfqaa yglsnemala isdhypvevt lt
//
LOCUS       XP_061008705             282 aa            linear   MAM 02-DEC-2023
DEFINITION  deoxyribonuclease-1 isoform X1 [Dama dama].
ACCESSION   XP_061008705
VERSION     XP_061008705.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152722.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..282
                     /product="deoxyribonuclease-1 isoform X1"
                     /calculated_mol_wt=31074
     Region          25..282
                     /region_name="DNaseIc"
                     /note="deoxyribonuclease I; smart00476"
                     /db_xref="CDD:128752"
     Site            order(29..30,32,61,63..64,100,133,156,190,192,233..234,
                     273..274)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197309"
     Site            order(29,61,100,156,190,192,234,273..274)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197309"
     Site            order(29,61,273)
                     /site_type="other"
                     /note="putative Mg binding site IVb [ion binding]"
                     /db_xref="CDD:197309"
     Site            order(31,156,190,192,274)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197309"
     Site            order(32,63..64,100,133,156,190,192,233,274)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197309"
     Site            order(121,134)
                     /site_type="other"
                     /note="Ca binding site II [ion binding]"
                     /db_xref="CDD:197309"
     Site            order(190,234,274)
                     /site_type="other"
                     /note="putative Mg binding site IVa [ion binding]"
                     /db_xref="CDD:197309"
     Site            order(223,225)
                     /site_type="other"
                     /note="Ca binding site I [ion binding]"
                     /db_xref="CDD:197309"
     CDS             1..282
                     /gene="DNASE1"
                     /coded_by="XM_061152722.1:123..971"
                     /db_xref="GeneID:133063397"
ORIGIN      
        1 mrgtrltgll lalagllqlg lsleiaafni rtfgetkmsn atlssyivri vsrydivliq
       61 evrdshlvav gklldrlnqd dpnnyhyvvs eplgrnsyke rylfvfrpnk vsvldtyqyd
      121 dgcescgnds fsrepavvkf sspstkvkef aivalhsaps davaeinsly dvyldvrqkw
      181 dlndimlmgd fnadcsyvts sqwssirlrt ssafqwlipd sadttatstn caydrivvag
      241 sllqssvvpg saapfdfqaa yglsnemala isdhypvevt lt
//
LOCUS       XP_061008707             249 aa            linear   MAM 02-DEC-2023
DEFINITION  deoxyribonuclease-1 isoform X2 [Dama dama].
ACCESSION   XP_061008707
VERSION     XP_061008707.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152724.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..249
                     /product="deoxyribonuclease-1 isoform X2"
                     /calculated_mol_wt=26865
     Region          <112..249
                     /region_name="EEP"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; cl00490"
                     /db_xref="CDD:469791"
     Site            order(123,159,241)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197306"
     CDS             1..249
                     /gene="DNASE1"
                     /coded_by="XM_061152724.1:596..1345"
                     /db_xref="GeneID:133063397"
ORIGIN      
        1 melltadqsc rglkapaqrt gappwgpqrr geleedeghq adraaarpgw paaagpvpgd
       61 sslqhphlwg dqdvqrytlq lhcagmtrtt tttwsvsrwa atatrsatsl csevkefaiv
      121 alhsapsdav aeinslydvy ldvrqkwdln dimlmgdfna dcsyvtssqw ssirlrtssa
      181 fqwlipdsad ttatstncay drivvagsll qssvvpgsaa pfdfqaaygl snemalaisd
      241 hypvevtlt
//
LOCUS       XP_061008708             249 aa            linear   MAM 02-DEC-2023
DEFINITION  deoxyribonuclease-1 isoform X2 [Dama dama].
ACCESSION   XP_061008708
VERSION     XP_061008708.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152725.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..249
                     /product="deoxyribonuclease-1 isoform X2"
                     /calculated_mol_wt=26865
     Region          <112..249
                     /region_name="EEP"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; cl00490"
                     /db_xref="CDD:469791"
     Site            order(123,159,241)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197306"
     CDS             1..249
                     /gene="DNASE1"
                     /coded_by="XM_061152725.1:689..1438"
                     /db_xref="GeneID:133063397"
ORIGIN      
        1 melltadqsc rglkapaqrt gappwgpqrr geleedeghq adraaarpgw paaagpvpgd
       61 sslqhphlwg dqdvqrytlq lhcagmtrtt tttwsvsrwa atatrsatsl csevkefaiv
      121 alhsapsdav aeinslydvy ldvrqkwdln dimlmgdfna dcsyvtssqw ssirlrtssa
      181 fqwlipdsad ttatstncay drivvagsll qssvvpgsaa pfdfqaaygl snemalaisd
      241 hypvevtlt
//
LOCUS       XP_061008709             249 aa            linear   MAM 02-DEC-2023
DEFINITION  deoxyribonuclease-1 isoform X2 [Dama dama].
ACCESSION   XP_061008709
VERSION     XP_061008709.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152726.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..249
                     /product="deoxyribonuclease-1 isoform X2"
                     /calculated_mol_wt=26865
     Region          <112..249
                     /region_name="EEP"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; cl00490"
                     /db_xref="CDD:469791"
     Site            order(123,159,241)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197306"
     CDS             1..249
                     /gene="DNASE1"
                     /coded_by="XM_061152726.1:766..1515"
                     /db_xref="GeneID:133063397"
ORIGIN      
        1 melltadqsc rglkapaqrt gappwgpqrr geleedeghq adraaarpgw paaagpvpgd
       61 sslqhphlwg dqdvqrytlq lhcagmtrtt tttwsvsrwa atatrsatsl csevkefaiv
      121 alhsapsdav aeinslydvy ldvrqkwdln dimlmgdfna dcsyvtssqw ssirlrtssa
      181 fqwlipdsad ttatstncay drivvagsll qssvvpgsaa pfdfqaaygl snemalaisd
      241 hypvevtlt
//
LOCUS       XP_061008710             230 aa            linear   MAM 02-DEC-2023
DEFINITION  deoxyribonuclease-1 isoform X3 [Dama dama].
ACCESSION   XP_061008710
VERSION     XP_061008710.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152727.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..230
                     /product="deoxyribonuclease-1 isoform X3"
                     /calculated_mol_wt=25394
     Region          <27..230
                     /region_name="EEP"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; cl00490"
                     /db_xref="CDD:469791"
     Site            order(69,82)
                     /site_type="other"
                     /note="Ca binding site II [ion binding]"
                     /db_xref="CDD:197337"
     Site            order(104,138,140,222)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197337"
     Site            order(138,182,222)
                     /site_type="other"
                     /note="putative Mg binding site IVa [ion binding]"
                     /db_xref="CDD:197337"
     Site            order(142,168)
                     /site_type="metal-binding"
                     /note="metal binding site III [ion binding]"
                     /db_xref="CDD:197337"
     Site            order(171,173)
                     /site_type="other"
                     /note="Ca binding site I [ion binding]"
                     /db_xref="CDD:197337"
     CDS             1..230
                     /gene="DNASE1"
                     /coded_by="XM_061152727.1:154..846"
                     /db_xref="GeneID:133063397"
ORIGIN      
        1 mtssssrrse tatwwpwgsc wtvltsgddp nnyhyvvsep lgrnsykery lfvfrpnkvs
       61 vldtyqyddg cescgndsfs repavvkfss pstkvkefai valhsapsda vaeinslydv
      121 yldvrqkwdl ndimlmgdfn adcsyvtssq wssirlrtss afqwlipdsa dttatstnca
      181 ydrivvagsl lqssvvpgsa apfdfqaayg lsnemalais dhypvevtlt
//
LOCUS       XP_061008711             185 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C16orf90 homolog isoform X1 [Dama dama].
ACCESSION   XP_061008711
VERSION     XP_061008711.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152728.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..185
                     /product="uncharacterized protein C16orf90 homolog isoform
                     X1"
                     /calculated_mol_wt=19588
     Region          17..176
                     /region_name="DUF4644"
                     /note="Domain of unknown function (DUF4644); pfam15486"
                     /db_xref="CDD:406048"
     CDS             1..185
                     /gene="C10H16orf90"
                     /coded_by="XM_061152728.1:1..558"
                     /db_xref="GeneID:133063398"
ORIGIN      
        1 mealvcafse lriredavsw aqghtshpdt ppniyegglg aqqqqcpsaq gskpknfrlr
       61 hlrglalylp ghlqpagqce shwlgrllag gclpqpeglv wpldlaqgtl grgnshhsal
      121 leaqlprdsr antassssmd pakgapsqsg hpeglglrpk rswgapeett cplckrtrsg
      181 glegp
//
LOCUS       XP_061008712             175 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C16orf90 homolog isoform X2 [Dama dama].
ACCESSION   XP_061008712
VERSION     XP_061008712.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152729.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..175
                     /product="uncharacterized protein C16orf90 homolog isoform
                     X2"
                     /calculated_mol_wt=18431
     Region          7..166
                     /region_name="DUF4644"
                     /note="Domain of unknown function (DUF4644); pfam15486"
                     /db_xref="CDD:406048"
     CDS             1..175
                     /gene="C10H16orf90"
                     /coded_by="XM_061152729.1:13..540"
                     /db_xref="GeneID:133063398"
ORIGIN      
        1 mealvyavsw aqghtshpdt ppniyegglg aqqqqcpsaq gskpknfrlr hlrglalylp
       61 ghlqpagqce shwlgrllag gclpqpeglv wpldlaqgtl grgnshhsal leaqlprdsr
      121 antassssmd pakgapsqsg hpeglglrpk rswgapeett cplckrtrsg glegp
//
LOCUS       XP_061008713            2432 aa            linear   MAM 02-DEC-2023
DEFINITION  CREB-binding protein [Dama dama].
ACCESSION   XP_061008713
VERSION     XP_061008713.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152730.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2432
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2432
                     /product="CREB-binding protein"
                     /calculated_mol_wt=263328
     Region          363..430
                     /region_name="zf-TAZ"
                     /note="TAZ zinc finger; pfam02135"
                     /db_xref="CDD:460457"
     Region          587..667
                     /region_name="KIX"
                     /note="KIX domain; pfam02172"
                     /db_xref="CDD:366953"
     Region          <680..1022
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          964..>1196
                     /region_name="COG5076"
                     /note="Transcription factor involved in chromatin
                     remodeling, contains bromodomain [Chromatin structure and
                     dynamics / Transcription]"
                     /db_xref="CDD:227408"
     Region          1090..1197
                     /region_name="Bromo_cbp_like"
                     /note="Bromodomain, cbp_like subfamily. Cbp (CREB binding
                     protein or CREBBP) is an acetyltransferase acting on
                     histone, which gives a specific tag for transcriptional
                     activation and also acetylates non-histone proteins.
                     CREBBP binds specifically to...; cd05495"
                     /db_xref="CDD:99927"
     Site            order(1118,1125,1128,1167,1171,1177)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99927"
     Region          1209..1281
                     /region_name="RING_CBP-p300"
                     /note="atypical RING domain found in CREB-binding protein
                     and p300 histone acetyltransferases; cd15802"
                     /db_xref="CDD:276805"
     Site            order(1209,1212..1213,1279,1281)
                     /site_type="other"
                     /note="HAT interface [polypeptide binding]"
                     /db_xref="CDD:276805"
     Region          1283..1314
                     /region_name="PHD_CBP_p300"
                     /note="PHD finger found in CREB-binding protein (CBP) and
                     histone acetyltransferase p300; cd15557"
                     /db_xref="CDD:277032"
     Site            order(1283..1286,1290,1309)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277032"
     Region          1345..1652
                     /region_name="HAT_KAT11"
                     /note="Histone acetylation protein; pfam08214"
                     /db_xref="CDD:400497"
     Region          1708..1748
                     /region_name="ZZ_CBP"
                     /note="Zinc finger, ZZ type. Zinc finger present in
                     CBP/p300 and related proteins. The ZZ motif coordinates
                     two zinc ions and most likely participates in ligand
                     binding or molecular scaffolding. CREB-binding protein
                     (CBP) is a large multidomain protein that...; cd02337"
                     /db_xref="CDD:239077"
     Site            order(1710,1713,1723,1726,1732,1735,1741,1743)
                     /site_type="other"
                     /note="Zinc-binding sites [ion binding]"
                     /db_xref="CDD:239077"
     Site            order(1710,1713,1732,1735)
                     /site_type="other"
                     /note="zinc cluster 1 [ion binding]"
                     /db_xref="CDD:239077"
     Site            order(1711,1720,1722,1728,1730)
                     /site_type="active"
                     /note="putative charged binding surface [active]"
                     /db_xref="CDD:239077"
     Site            order(1721,1736,1745,1748)
                     /site_type="active"
                     /note="putative hydrophobic binding surface [active]"
                     /db_xref="CDD:239077"
     Site            order(1723,1726,1741,1743)
                     /site_type="other"
                     /note="zinc cluster 2 [ion binding]"
                     /db_xref="CDD:239077"
     Region          1775..1843
                     /region_name="zf-TAZ"
                     /note="TAZ zinc finger; pfam02135"
                     /db_xref="CDD:460457"
     Region          2037..2117
                     /region_name="Creb_binding"
                     /note="Creb binding; pfam09030"
                     /db_xref="CDD:462659"
     Region          2150..>2342
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     CDS             1..2432
                     /gene="CREBBP"
                     /coded_by="XM_061152730.1:124..7422"
                     /db_xref="GeneID:133063399"
ORIGIN      
        1 maenlldgpp npkraklssp gfsandstdf gslfdlendl pdelipngge lsllnsgnlv
       61 pdaaskhkql sellrggsss sinpgignvs asspaqqglg gqaqgqpssa nmaslgamgk
      121 splnqgdssa pslpkqaast sgptppasqa lnpqaqkqvg lvtsspatsq tgpgicmntn
      181 fnqthpglln snsghslmnq aqqgqaqvmn gslgaagrgr gagmpyptpa mqgatssvla
      241 etltqvspqm ashaglntaq aggmskmgmt gntspfgqpf sqtggqqmga pgvnpqlpsk
      301 qsmvnslppf aadiknasvt nvpnmsqmqt svgivpaqai atgptadpek rkliqqqlvl
      361 llhahkcqrr eqangevrac slphcrtmkn vlnhmthcqa gkacqvahca ssrqiishwk
      421 nctrhdcpvc lplknasdkr nqqtilgspa sgiqntigsv gtgqqnatsl snpnpidpss
      481 mqrayaalgl pylnqpqtql qpqvpgqqpa qpqthqqmrs lnplgnnpmn ipaggittdq
      541 qppnlisesa lptslgatnp lmndgsnsgn igtlstipaa appsstgvrk swhehvtqdl
      601 rshlvhklvq aifptpdpaa lkdrrmenlv ayakkvegdm yesansrdey yhllaekiyk
      661 iqkeleekrr srlhkqgilg nqpalpapgt qppgipqaqp vrppngpmpl pvnrmqvsqg
      721 mnsfnpislg nvqlpqapmg praaspmnhs vpmnsmgsvp gmaispsrmp qppnmmgaha
      781 nsmmaqapaq sqflpqsqfp sssgalsvss vgmgqpaaqa gvpqgqvpgt alpnplnmlg
      841 pqasqlpcpp vtqpplhqtp ppastaagmp slqhpaapgv tppqpaaptq pstpasssgq
      901 tptptpgsvp sasqtqstpt vqaaaqaqvt pqpqtpvqpp svatpqssqq qptpvhtqpp
      961 gtplsqtaas idnrvptpss vasaetnsqq pgpevpllem kaeiktedte pdagepkgep
     1021 gavmmeedlq gssqvkeetd pteqkseame vdekkaevkv eakeeeegsa ngavsqstsp
     1081 sqprrkifkp eelrqalmpt lealyrqdpe slpfrqpvdp qllgipdyfd ivknpmdlst
     1141 ikrkldtgqy qepwqyvddv wlmfnnawly nrktsrvykf csklaevfeq eidpvmqslg
     1201 yccgrkyefs pqtlccygkq lctiprdaay ysyqnryhfc ekcfteiqge nvtlgddpsq
     1261 pqttiskdqf ekkkndtldp epfvdckecg rkmhqicvlh ydiiwpsgfv cdnclkktgr
     1321 trkenkfsak rlqttrlgnh ledrvnkflr rqnhpeagev fvrvvassdk tvevkpgmks
     1381 rfvdsgemse sfpyrtkalf afeeidgvdv cffgmhvqey gsdcpppntr rvyisyldsi
     1441 hffrprclrt avyheiligy leyvkklgyv tghiwacpps egddyifhch ppdqkipkpk
     1501 rlqewykkml dkafaeriih dykdilkqat edrltsakel pyfegdfwpn vleesikele
     1561 qeeeerkkee staasetteg sqgdsknakk knnkktnknk ssisrankkk psmpnvsndl
     1621 sqklyatmek hkevffvihl hagpvintlp pivdpdplls cdlmdgrdaf ltlardkhwe
     1681 fsslrrskws tlcmlvelht qgqdrfvytc neckhhvetr whctvcedyd lcincyntks
     1741 hthkmvkwgl glddeggsqg epqskspqes rrlsiqrciq slvhacqcrn ancslpscqk
     1801 mkrvvqhtkg ckrktnggcp vckqlialcc yhakhcqenk cpvpfclnik hklrqqqiqh
     1861 rlqqaqlmrr rmatmntrnv pqqslpspts appgtptqqp stpqtpqppa qpqpspvsms
     1921 pagfpsvart qppttvstgk ptsqvpappp paqpppaave aarqiereaq qqqhlyrvni
     1981 nngmppgrtg mvtpvsqmap vglnvprpgq vsgpvvptlp agqwqqapip qqqpmpgmpr
     2041 pvmsmqaqpa vagprmsgvq pprsispgal qdllrtlksp sspqqqqqvl nilksnpqlm
     2101 aafikqrtak yvasqpglqp qpglqaqpgl hqqpglqnln amqaggprpg vppqqqamgg
     2161 lnpqgqalni mspghnpsma smnpqyreml rrqllqqqqq qqqqqqqgga gmaggmaghg
     2221 qfqqppgptg yppampqqrm qqhlpmqgsa mgpmaaqmgq lgqmgqpglg adstpniqqa
     2281 lqqrilqqqq mkqqmgspgq pnpmspqqhm lsgqpqashl pgqqmatsls sqvrspapvq
     2341 sprpqsqpph sspspriqpq psphhvspqt gsphpglavt massidqghl gnpeqsamlp
     2401 qlntpnrsal sselslvgdt tgdtlekfve gl
//
LOCUS       XP_061008714            1354 aa            linear   MAM 02-DEC-2023
DEFINITION  adenylate cyclase type 9 isoform X1 [Dama dama].
ACCESSION   XP_061008714
VERSION     XP_061008714.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152731.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1354
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1354
                     /product="adenylate cyclase type 9 isoform X1"
                     /calculated_mol_wt=150977
     Region          169..576
                     /region_name="AcyC"
                     /note="Adenylate cyclase, class 3 [Signal transduction
                     mechanisms]; COG2114"
                     /db_xref="CDD:441717"
     Region          385..573
                     /region_name="Guanylate_cyc"
                     /note="Adenylate and Guanylate cyclase catalytic domain;
                     pfam00211"
                     /db_xref="CDD:425528"
     Site            order(397,399..404,439,441..443,446,508..510,514..515,
                     518..519)
                     /site_type="active"
                     /note="nucleotidyl binding site [active]"
                     /db_xref="CDD:143636"
     Site            order(399,443)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143636"
     Site            order(404,416,419..420,423,427,439..440,496,499,509..512,
                     515)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143636"
     Region          1051..1242
                     /region_name="Guanylate_cyc"
                     /note="Adenylate and Guanylate cyclase catalytic domain;
                     pfam00211"
                     /db_xref="CDD:425528"
     Site            order(1062,1064..1069,1109,1111..1113,1116,1186..1188,
                     1192..1193,1196..1197,1233)
                     /site_type="active"
                     /note="nucleotidyl binding site [active]"
                     /db_xref="CDD:143636"
     Site            order(1064,1113)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143636"
     Site            order(1069,1083,1086..1087,1090,1094,1109..1110,1174,1177,
                     1187..1190,1193,1233)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143636"
     CDS             1..1354
                     /gene="ADCY9"
                     /coded_by="XM_061152731.1:198..4262"
                     /db_xref="GeneID:133063400"
ORIGIN      
        1 maspphqqll qhhstevscd ssgdsnsvrv rinpkqpssn shpkhckysi ssscsssgds
       61 ggvprrmgag grlrrrkklp qlferassrw wdpkfdsvnl eeacmercfp qtqrrfryal
      121 fyigfacllw siyfgvhmks klivmvvpal cflvvcvgff lftftkmyar hyvwtslvlt
      181 llvfaltlaa qfqvltplsg rvdsfnhtra vrptdtclsq vgsfsmciev lfllytvmhl
      241 plylslilgv aysvlfetfg yhfqdeacfp spgaealhwe llsrallhlc ihaigihlfi
      301 msqvrsrstf lkvgqsimhg kdlevekalk ermihsvmpr iiaddlmkqg dedsensvkr
      361 hatsspknrk kkssiqkapi afrpfkmqqi eevsilfadi vgftkmsank sahalvglln
      421 dlfgrfdrlc eetkcekist lgdcyycvag cpepradhay cciemglgmi raieqfcqek
      481 kemvnmrvgv htgtvlcgil gmrrfkfdvw sndvnlanlm eqlgvagkvh iseatakyld
      541 dryemedgkv terlgqsvva dqlkglktyl iagqrakesh cscseallsg fevldgsrvs
      601 sgprgqgtas pgsvsdlaqt vktfdnlktc pscgitftpk seagaeggav qngcqeepkn
      661 sakasggpss ktqngllspp peekltnsqt slceilqekg rwagvsldqs allplrfkni
      721 rektdahfvd vikedslmkd yffkppinqf slnfldpele rayrtsyqee viknspvktf
      781 asatfsslld vflsttvfli lsitcflkyg aastppppaa lavfgaalll ellslvvsvr
      841 mvffledvma ctkrllewia gwlprhfiga ilvslpalav yshvtsefet nihstvftgs
      901 avltavvqyc nfcqlsswmr sslatavgag plllllyvsl cpdsstvish ldsvqnfsst
      961 rklcntslph dsrspaslig qevilvffll lllvwflnre fevsyrlhyh gdveadlhrt
     1021 kiqsmrdqad wllrniipyh vaeqlkvsqt ysknhdsggv ifasivnfse fyeenyeggk
     1081 ecyrvlneli gdfdellskp dyssiekikt igatymaasg lnatqcrdss hpqehlqilf
     1141 efakemmrvv ddfnnnmlwf nfklrvgfnh gpltagvigt tkllydiwgd tvniasrmdt
     1201 tgvecriqvs eesyrvlskm gyefdyrgtv nvkgkgqmkt ylypkctdsg lvpqhqlsis
     1261 pdirvqvdgs igrsptdeia nlvpsiqnpd qvslgsenna qtrdahpsak rpwkepirae
     1321 ercrfgkaie ksdceevgme eaneltklnv skra
//
LOCUS       XP_061008715            1340 aa            linear   MAM 02-DEC-2023
DEFINITION  adenylate cyclase type 9 isoform X2 [Dama dama].
ACCESSION   XP_061008715
VERSION     XP_061008715.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152732.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1340
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1340
                     /product="adenylate cyclase type 9 isoform X2"
                     /calculated_mol_wt=149462
     Region          169..576
                     /region_name="AcyC"
                     /note="Adenylate cyclase, class 3 [Signal transduction
                     mechanisms]; COG2114"
                     /db_xref="CDD:441717"
     Region          385..573
                     /region_name="Guanylate_cyc"
                     /note="Adenylate and Guanylate cyclase catalytic domain;
                     pfam00211"
                     /db_xref="CDD:425528"
     Site            order(397,399..404,439,441..443,446,508..510,514..515,
                     518..519)
                     /site_type="active"
                     /note="nucleotidyl binding site [active]"
                     /db_xref="CDD:143636"
     Site            order(399,443)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143636"
     Site            order(404,416,419..420,423,427,439..440,496,499,509..512,
                     515)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143636"
     Region          1037..1228
                     /region_name="Guanylate_cyc"
                     /note="Adenylate and Guanylate cyclase catalytic domain;
                     pfam00211"
                     /db_xref="CDD:425528"
     Site            order(1048,1050..1055,1095,1097..1099,1102,1172..1174,
                     1178..1179,1182..1183,1219)
                     /site_type="active"
                     /note="nucleotidyl binding site [active]"
                     /db_xref="CDD:143636"
     Site            order(1050,1099)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143636"
     Site            order(1055,1069,1072..1073,1076,1080,1095..1096,1160,1163,
                     1173..1176,1179,1219)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143636"
     CDS             1..1340
                     /gene="ADCY9"
                     /coded_by="XM_061152732.1:198..4220"
                     /db_xref="GeneID:133063400"
ORIGIN      
        1 maspphqqll qhhstevscd ssgdsnsvrv rinpkqpssn shpkhckysi ssscsssgds
       61 ggvprrmgag grlrrrkklp qlferassrw wdpkfdsvnl eeacmercfp qtqrrfryal
      121 fyigfacllw siyfgvhmks klivmvvpal cflvvcvgff lftftkmyar hyvwtslvlt
      181 llvfaltlaa qfqvltplsg rvdsfnhtra vrptdtclsq vgsfsmciev lfllytvmhl
      241 plylslilgv aysvlfetfg yhfqdeacfp spgaealhwe llsrallhlc ihaigihlfi
      301 msqvrsrstf lkvgqsimhg kdlevekalk ermihsvmpr iiaddlmkqg dedsensvkr
      361 hatsspknrk kkssiqkapi afrpfkmqqi eevsilfadi vgftkmsank sahalvglln
      421 dlfgrfdrlc eetkcekist lgdcyycvag cpepradhay cciemglgmi raieqfcqek
      481 kemvnmrvgv htgtvlcgil gmrrfkfdvw sndvnlanlm eqlgvagkvh iseatakyld
      541 dryemedgkv terlgqsvva dqlkglktyl iagqrakesh cscseallsg fevldgsrvs
      601 sgprgqgtas pgsvsdlaqt vktfdnlktc pscgitftpk seagaeggav qngcqeepkn
      661 sakasggpss ktqngllspp peekltnsqt slceilqekg rwagvsldqs allplrfkni
      721 rektdahfvd vikedslmkd yffkppinqf slnfldpele rayrtsyqee viknspvktf
      781 asatfsslld vflsttvfli lsitcflkyg aastppppaa lavfgaalll ellslvvsvr
      841 mvffledvma ctkrllewia gwlprhfiga ilvslpalav yshvtsefet nihstvftgs
      901 avltavvqyc nfcqlsswmr sslatavgag plllllyvsl cpdsstrklc ntslphdsrs
      961 pasligqevi lvfflllllv wflnrefevs yrlhyhgdve adlhrtkiqs mrdqadwllr
     1021 niipyhvaeq lkvsqtyskn hdsggvifas ivnfsefyee nyeggkecyr vlneligdfd
     1081 ellskpdyss iekiktigat ymaasglnat qcrdsshpqe hlqilfefak emmrvvddfn
     1141 nnmlwfnfkl rvgfnhgplt agvigttkll ydiwgdtvni asrmdttgve criqvseesy
     1201 rvlskmgyef dyrgtvnvkg kgqmktylyp kctdsglvpq hqlsispdir vqvdgsigrs
     1261 ptdeianlvp siqnpdqvsl gsennaqtrd ahpsakrpwk epiraeercr fgkaieksdc
     1321 eevgmeeane ltklnvskra
//
LOCUS       XP_061008717             335 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor AP-4 isoform X1 [Dama dama].
ACCESSION   XP_061008717
VERSION     XP_061008717.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152734.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..335
                     /product="transcription factor AP-4 isoform X1"
                     /calculated_mol_wt=38000
     Region          46..106
                     /region_name="bHLHzip_TFAP4"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in transcription factor AP-4 (TFAP4) and similar
                     proteins; cd11419"
                     /db_xref="CDD:381425"
     Site            order(50,54,56..58,60,65,84..85)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381425"
     Site            order(63..64,67..68,70..71,74,78,86,89,93,96,99..104)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381425"
     CDS             1..335
                     /gene="TFAP4"
                     /coded_by="XM_061152734.1:173..1180"
                     /db_xref="GeneID:133063401"
ORIGIN      
        1 meyfmvptqk vpslqhfrkt ekevigglcs lanipltpet qrdqerrirr eiansnerrr
       61 mqsinagfqs lktliphtdg eklskaailq qtaeyifsle qektrllqqn tqlkrfiqel
      121 sgsspkrrra edkdegigsp diwedekaed lrremielrq qldkersvrm mleeqvrsle
      181 ahmypeklkv iaqqvqlqqq qeqvrllhqe klereqqhlr tqllptpapt hhptvivpap
      241 apppshhinv vtmgpssvin svstsrqnld tivqaiqhie gtqgqeeeqr ravivkpvrg
      301 cpeahasdta sdseasdsda mdqgreepag ngglp
//
LOCUS       XP_061008718             316 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor AP-4 isoform X2 [Dama dama].
ACCESSION   XP_061008718
VERSION     XP_061008718.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152735.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..316
                     /product="transcription factor AP-4 isoform X2"
                     /calculated_mol_wt=35777
     Region          46..106
                     /region_name="bHLHzip_TFAP4"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in transcription factor AP-4 (TFAP4) and similar
                     proteins; cd11419"
                     /db_xref="CDD:381425"
     Site            order(50,54,56..58,60,65,84..85)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381425"
     Site            order(63..64,67..68,70..71,74,78,86,89,93,96,99..104)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381425"
     CDS             1..316
                     /gene="TFAP4"
                     /coded_by="XM_061152735.1:177..1127"
                     /db_xref="GeneID:133063401"
ORIGIN      
        1 meyfmvptqk vpslqhfrkt ekevigglcs lanipltpet qrdqerrirr eiansnerrr
       61 mqsinagfqs lktliphtdg eklskaailq qtaeyifsle qektrllqqn tqlkrfiqel
      121 sgsspkrrra edkdegigsp diwedekaed lrremielrq qldkersvrm mleeqvqlqq
      181 qqeqvrllhq eklereqqhl rtqllptpap thhptvivpa papppshhin vvtmgpssvi
      241 nsvstsrqnl dtivqaiqhi egtqgqeeeq rravivkpvr gcpeahasdt asdseasdsd
      301 amdqgreepa gngglp
//
LOCUS       XP_061008719             307 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor AP-4 isoform X3 [Dama dama].
ACCESSION   XP_061008719
VERSION     XP_061008719.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152736.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..307
                     /product="transcription factor AP-4 isoform X3"
                     /calculated_mol_wt=34752
     Region          18..78
                     /region_name="bHLHzip_TFAP4"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in transcription factor AP-4 (TFAP4) and similar
                     proteins; cd11419"
                     /db_xref="CDD:381425"
     Site            order(22,26,28..30,32,37,56..57)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381425"
     Site            order(35..36,39..40,42..43,46,50,58,61,65,68,71..76)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381425"
     CDS             1..307
                     /gene="TFAP4"
                     /coded_by="XM_061152736.1:294..1217"
                     /db_xref="GeneID:133063401"
ORIGIN      
        1 mslanipltp etqrdqerri rreiansner rrmqsinagf qslktlipht dgeklskaai
       61 lqqtaeyifs leqektrllq qntqlkrfiq elsgsspkrr raedkdegig spdiwedeka
      121 edlrremiel rqqldkersv rmmleeqvrs leahmypekl kviaqqvqlq qqqeqvrllh
      181 qeklereqqh lrtqllptpa pthhptvivp apapppshhi nvvtmgpssv insvstsrqn
      241 ldtivqaiqh iegtqgqeee qrravivkpv rgcpeahasd tasdseasds damdqgreep
      301 agngglp
//
LOCUS       XP_061008720             922 aa            linear   MAM 02-DEC-2023
DEFINITION  coronin-7 isoform X1 [Dama dama].
ACCESSION   XP_061008720
VERSION     XP_061008720.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152737.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..922
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..922
                     /product="coronin-7 isoform X1"
                     /calculated_mol_wt=99867
     Region          6..>386
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          81..124
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          129..164
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          172..208
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          215..256
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          264..302
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          469..878
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          545..582
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          596..632
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          638..675
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..922
                     /gene="CORO7"
                     /coded_by="XM_061152737.1:112..2880"
                     /db_xref="GeneID:133063402"
ORIGIN      
        1 mnrfkvskfr htearpsrre awisdiragt apscgnhika scsliafnsd rpgvlgivpl
       61 esqgedkrqv thlgchsdlv tdldfspfdd fllatasadr tvklwrlpas gqalppgpgl
      121 llgpedaqve vlqfhptadg vllsvagraa kvwdatkqqp ltelathgdl vqgaawsrdg
      181 allgttckdk qlrifdprak peaaqstqah ennrdgrlvw tgtqehlvst gfnqtrerev
      241 klwdtrlfsg altsltldts prslmplldp dsgllvlagk genqlycyea apqqpalspv
      301 tqcllesalr gaalvprral avmgcevlrv lqlsdtaivp isyhvprkta efhedlfpdt
      361 agcvpasdph awwagsdrqv qrvslhparr ahpsftscla ppaeptpaaa rpagtpvgds
      421 dpsegfsspp ssltspstps slgpsltsts gigtspsqrs lqsllgpssk frhaqgtvlh
      481 rdshitnlkg lnlttpgesd gfcanqlhva vpllssggqv avlelrkpgr lpdtalptlq
      541 ngvavtdlaw dpfdphrlav agedarirlw rvppeglqev lttpeavltg htekiyslrf
      601 hplaadvlas ssydltvriw dlkvgaerlr lqghrdqifg lawspdgqql atvckdgrlr
      661 iyeprgssep lqegpgpega rgarvvwvcd ghyllvsgfd srserqllly saealaggps
      721 avlgldvaps tllpsydrdt glvlltgkgd trvflyellp espfflecns ftspdphkgf
      781 illpktecdv revefarclr lrqtslepva frlprvrkef fqddvfpdta vswepalsae
      841 awlggangqp rllslqppgm tpvsqaprea parrapssvy leeksdqqkk eellsamvak
      901 lgnredplpq dsfegvdede wd
//
LOCUS       XP_061008721            1045 aa            linear   MAM 02-DEC-2023
DEFINITION  coronin-7 isoform X2 [Dama dama].
ACCESSION   XP_061008721
VERSION     XP_061008721.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152738.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1045
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1045
                     /product="coronin-7 isoform X2"
                     /calculated_mol_wt=113484
     Region          6..>386
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          81..124
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          129..164
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          172..208
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          215..256
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          264..302
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          469..878
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          545..582
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          596..632
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          638..675
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          922..1045
                     /region_name="Pam16"
                     /note="pfam03656"
                     /db_xref="CDD:252088"
     CDS             1..1045
                     /gene="CORO7"
                     /coded_by="XM_061152738.1:111..3248"
                     /db_xref="GeneID:133063402"
ORIGIN      
        1 mnrfkvskfr htearpsrre awisdiragt apscgnhika scsliafnsd rpgvlgivpl
       61 esqgedkrqv thlgchsdlv tdldfspfdd fllatasadr tvklwrlpas gqalppgpgl
      121 llgpedaqve vlqfhptadg vllsvagraa kvwdatkqqp ltelathgdl vqgaawsrdg
      181 allgttckdk qlrifdprak peaaqstqah ennrdgrlvw tgtqehlvst gfnqtrerev
      241 klwdtrlfsg altsltldts prslmplldp dsgllvlagk genqlycyea apqqpalspv
      301 tqcllesalr gaalvprral avmgcevlrv lqlsdtaivp isyhvprkta efhedlfpdt
      361 agcvpasdph awwagsdrqv qrvslhparr ahpsftscla ppaeptpaaa rpagtpvgds
      421 dpsegfsspp ssltspstps slgpsltsts gigtspsqrs lqsllgpssk frhaqgtvlh
      481 rdshitnlkg lnlttpgesd gfcanqlhva vpllssggqv avlelrkpgr lpdtalptlq
      541 ngvavtdlaw dpfdphrlav agedarirlw rvppeglqev lttpeavltg htekiyslrf
      601 hplaadvlas ssydltvriw dlkvgaerlr lqghrdqifg lawspdgqql atvckdgrlr
      661 iyeprgssep lqegpgpega rgarvvwvcd ghyllvsgfd srserqllly saealaggps
      721 avlgldvaps tllpsydrdt glvlltgkgd trvflyellp espfflecns ftspdphkgf
      781 illpktecdv revefarclr lrqtslepva frlprvrkef fqddvfpdta vswepalsae
      841 awlggangqp rllslqppgm tpvsqaprea parrapssvy leeksdqqkk eellsamvak
      901 lgnredplpq dsfegvdede wakylaqilv mgaqvvgraf aralrqefaa sraaadargr
      961 aghqsaaasn lsglslqeaq qilnvsklsp eeiqknyehl fkvndksvgg sfylqskvvr
     1021 akerleeelr iqaqedrerq qppkt
//
LOCUS       XP_061008722             673 aa            linear   MAM 02-DEC-2023
DEFINITION  vasorin [Dama dama].
ACCESSION   XP_061008722
VERSION     XP_061008722.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152739.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..673
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..673
                     /product="vasorin"
                     /calculated_mol_wt=71457
     Region          26..57
                     /region_name="LRRNT"
                     /note="Leucine rich repeat N-terminal domain; smart00013"
                     /db_xref="CDD:214470"
     Region          37..59
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          60..80
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <66..>347
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          81..104
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          105..128
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          129..152
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          153..196
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          197..220
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          221..243
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          244..268
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          273..>578
                     /region_name="PCC"
                     /note="polycystin cation channel protein; TIGR00864"
                     /db_xref="CDD:188093"
     CDS             1..673
                     /gene="VASN"
                     /coded_by="XM_061152739.1:136..2157"
                     /db_xref="GeneID:133063403"
ORIGIN      
        1 mrsraplcll lplllllpal gpgvqgcpsg cqcnqpqtvf ctarqgttvp ldvppdtvgl
       61 yifengittl dtgsfaglpg lqlldlsqnq iaslpggvfq planlsnldl tanrlreitn
      121 etfrglrrle rlylgknrir hiqpgafdal srllelklqd nelrvlpplr lprlllldls
      181 hnglpalepg tldtanveal rlaglglrhl deglfsrlrn lhdldvadnq lervppavrg
      241 lrgltrlrla gntriaqlrp edlaglaalq eldlsnlslq alphelsalf prlrllaaar
      301 npfncvcpls wfgpwvresr ltlaspeetr chfppknagr llldldyadf gcpattttat
      361 apttrapvre ptlppsspap trlrptelat eapsrpppap ptagpvpppr dcpasiclng
      421 gtchlgargh leclchqgft glycegrvrp gprpspapat prplplgiep asptslrvgl
      481 qrfqqgsslq lrslrltyrn lsgpdkrpvt lrlpaslaey tvtqlrpnat ysicvralga
      541 grvpegeeac geartppaar snhapvtqar egnlplliap alaavflavl aavgaafcvr
      601 rgraaaavaq gkgqvgpgag plelegvkap lepdpkaleg ggeappggle cevplmgysg
      661 pgpqgplpak pyi
//
LOCUS       XP_061008723             524 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein GLIS2 [Dama dama].
ACCESSION   XP_061008723
VERSION     XP_061008723.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152740.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..524
                     /product="zinc finger protein GLIS2"
                     /calculated_mol_wt=55480
     Region          213..229
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(214,216,218,220..221,224..225,228,242,244,248..249,
                     252..253,256,272,274,276,278..279,282..283,286)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          233..>325
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          237..257
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          265..287
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          295..317
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..524
                     /gene="GLIS2"
                     /coded_by="XM_061152740.1:292..1866"
                     /db_xref="GeneID:133063404"
ORIGIN      
        1 mhsldepldl klsitklraa rekrertlsa arhralhrel gladdsptpg spgsppsgfl
       61 lnpkfpekve grfsaaplvd lslsppsgld spngssslsp erqgngdlpt apagpdlqpl
      121 ryldgvpssf qfflplgsgg alhlpassfl tppkdkclsp elplpkqlvc rwakcnqpfe
      181 llqdlvdhvn dyhvkpekda gycchwegca rhgrgfnary kmlihirtht nekphrcptc
      241 sksfsrlenl kihnrshtge kpyvcpyegc nkrysnssdr fkhtrthyvd kpyyckmpgc
      301 hkrytdpssl rkhikahghf vsheqhellq lrpppkpplp apdgspyvsg aqiiipnpaa
      361 lfggpglpgl plplapgpld lsalacgngg gaggaggmgp glpgpvlpln laknpllpsp
      421 fgagglglpv vsllagsagg kaegekgrga vqaralgseg rktplerteg grsrpspdgl
      481 pllpgtvldl stgvnsaass pealapgwvv ippgsvllkp avvn
//
LOCUS       XP_061008725             479 aa            linear   MAM 02-DEC-2023
DEFINITION  dnaJ homolog subfamily A member 3, mitochondrial isoform X1 [Dama
            dama].
ACCESSION   XP_061008725
VERSION     XP_061008725.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152742.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..479
                     /product="dnaJ homolog subfamily A member 3, mitochondrial
                     isoform X1"
                     /calculated_mol_wt=51724
     Region          93..429
                     /region_name="DnaJ_bact"
                     /note="chaperone protein DnaJ; TIGR02349"
                     /db_xref="CDD:274090"
     CDS             1..479
                     /gene="DNAJA3"
                     /coded_by="XM_061152742.1:34..1473"
                     /db_xref="GeneID:133063405"
ORIGIN      
        1 maarcstrwl lvavgtprlp aaagrgarpp mggvvgaslg rslsvtafpp slggrgpgal
       61 ltlrpgvsft gvkrypfvct asfhtsthla kedyyqilgv prsasqkeik kayyqlakky
      121 hpdtnkddpk akekfsqlae ayevlsdevk rkqydtygsa gfdpgagssg qsywkggptv
      181 dpeelfrkif gefssssfgd fqsvfnqpqe yimeltfnqa akgvnkeftv nitdtcercd
      241 gkgnepgtkv qhchycggsg metintgpfv mrstcrrcgg rgsiitspcv vcrgagqakq
      301 kkkvvipvpa gvedgqtvrm pvgkreifit frvqkspvfr rdgadihsdl fisiaqailg
      361 gtartqglye tinvtippgt qsdqkirmsg kgiprinsyg ygdhyihiki rvpkrltsrq
      421 qslilsyaed etdvegtvng vtntstggst mdssaggkar peagedegfl sklkrmfts
//
LOCUS       XP_061008726             453 aa            linear   MAM 02-DEC-2023
DEFINITION  dnaJ homolog subfamily A member 3, mitochondrial isoform X2 [Dama
            dama].
ACCESSION   XP_061008726
VERSION     XP_061008726.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152743.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..453
                     /product="dnaJ homolog subfamily A member 3, mitochondrial
                     isoform X2"
                     /calculated_mol_wt=49037
     Region          93..429
                     /region_name="DnaJ_bact"
                     /note="chaperone protein DnaJ; TIGR02349"
                     /db_xref="CDD:274090"
     CDS             1..453
                     /gene="DNAJA3"
                     /coded_by="XM_061152743.1:33..1394"
                     /db_xref="GeneID:133063405"
ORIGIN      
        1 maarcstrwl lvavgtprlp aaagrgarpp mggvvgaslg rslsvtafpp slggrgpgal
       61 ltlrpgvsft gvkrypfvct asfhtsthla kedyyqilgv prsasqkeik kayyqlakky
      121 hpdtnkddpk akekfsqlae ayevlsdevk rkqydtygsa gfdpgagssg qsywkggptv
      181 dpeelfrkif gefssssfgd fqsvfnqpqe yimeltfnqa akgvnkeftv nitdtcercd
      241 gkgnepgtkv qhchycggsg metintgpfv mrstcrrcgg rgsiitspcv vcrgagqakq
      301 kkkvvipvpa gvedgqtvrm pvgkreifit frvqkspvfr rdgadihsdl fisiaqailg
      361 gtartqglye tinvtippgt qsdqkirmsg kgiprinsyg ygdhyihiki rvpkrltsrq
      421 qslilsyaed etdvegtvng vtntstgkrs tgn
//
LOCUS       XP_061008727             334 aa            linear   MAM 02-DEC-2023
DEFINITION  heme oxygenase 2 [Dama dama].
ACCESSION   XP_061008727
VERSION     XP_061008727.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152744.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..334
                     /product="heme oxygenase 2"
                     /calculated_mol_wt=37648
     Region          31..236
                     /region_name="Heme_oxygenase"
                     /note="Heme oxygenase; pfam01126"
                     /db_xref="CDD:395895"
     Site            order(38,45,48..49,54,58,154..156,162..163,167,199,203,
                     227,230,234)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:350856"
     Region          147..174
                     /region_name="kinked helix"
                     /note="kinked helix [structural motif]"
                     /db_xref="CDD:350856"
     CDS             1..334
                     /gene="HMOX2"
                     /coded_by="XM_061152744.1:165..1169"
                     /db_xref="GeneID:133063406"
ORIGIN      
        1 msaeletseg ldepekkisg vpekdnhtrm adlsellkeg tkeshdraen tqfvkdflkg
       61 nirkelfkla ttalyftysa leeeidrnkd hpafaplyfp melhrkkali rdmeylygeh
      121 weeqakcsea trkyverihe vgqnepellv ahaytrymgd lsggqvlkkv aqralklpst
      181 gegtqfylfe nvdnaqqfkq lyrarmnald lnletkekiv eeankafefn mqvfneldqa
      241 gsllaketle drlpahdglp thsrlptqdg lpvhdgkgdv rkcpyyaaql dkgalegssc
      301 pfgaalamlr rpslqfllaa svalaaglla wysm
//
LOCUS       XP_061008728             299 aa            linear   MAM 02-DEC-2023
DEFINITION  nmrA-like family domain-containing protein 1 isoform X1 [Dama
            dama].
ACCESSION   XP_061008728
VERSION     XP_061008728.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152745.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..299
                     /product="nmrA-like family domain-containing protein 1
                     isoform X1"
                     /calculated_mol_wt=32594
     Region          7..237
                     /region_name="NmrA_like_SDR_a"
                     /note="NmrA (a transcriptional regulator) and HSCARG (an
                     NADPH sensor) like proteins, atypical (a) SDRs; cd05251"
                     /db_xref="CDD:187561"
     Site            order(11,13..16,37,79..80,82,114,133,152..155,158)
                     /site_type="other"
                     /note="NADP binding site [chemical binding]"
                     /db_xref="CDD:187561"
     Site            order(129,133)
                     /site_type="active"
                     /db_xref="CDD:187561"
     Site            198
                     /site_type="other"
                     /note="regulatory binding site [polypeptide binding]"
                     /db_xref="CDD:187561"
     CDS             1..299
                     /gene="NMRAL1"
                     /coded_by="XM_061152745.1:77..976"
                     /db_xref="GeneID:133063407"
ORIGIN      
        1 madkklvvvf gatgaqggsv artlledgtf rvrvvtrdpg qraakqlglq gaevvqgdqd
       61 deasmelals gahaafivtn ywencspeqe vkqgklladl akrlglcyvv ysglenikkl
      121 tggrltaghf dgkgeveeyf rdigvpmtsv rlpcyfenll syflpqkapd grsyllslpm
      181 gdvpidgmav adlgpvvlsl lktpeeyvgr niglstcrht aeeyaallak htgkavrdak
      241 tspedyeklg fpgardlanm frfyalkpdr nieltlklnp kartldqwle qhkgdfagl
//
LOCUS       XP_061008729             299 aa            linear   MAM 02-DEC-2023
DEFINITION  nmrA-like family domain-containing protein 1 isoform X1 [Dama
            dama].
ACCESSION   XP_061008729
VERSION     XP_061008729.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152746.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..299
                     /product="nmrA-like family domain-containing protein 1
                     isoform X1"
                     /calculated_mol_wt=32594
     Region          7..237
                     /region_name="NmrA_like_SDR_a"
                     /note="NmrA (a transcriptional regulator) and HSCARG (an
                     NADPH sensor) like proteins, atypical (a) SDRs; cd05251"
                     /db_xref="CDD:187561"
     Site            order(11,13..16,37,79..80,82,114,133,152..155,158)
                     /site_type="other"
                     /note="NADP binding site [chemical binding]"
                     /db_xref="CDD:187561"
     Site            order(129,133)
                     /site_type="active"
                     /db_xref="CDD:187561"
     Site            198
                     /site_type="other"
                     /note="regulatory binding site [polypeptide binding]"
                     /db_xref="CDD:187561"
     CDS             1..299
                     /gene="NMRAL1"
                     /coded_by="XM_061152746.1:237..1136"
                     /db_xref="GeneID:133063407"
ORIGIN      
        1 madkklvvvf gatgaqggsv artlledgtf rvrvvtrdpg qraakqlglq gaevvqgdqd
       61 deasmelals gahaafivtn ywencspeqe vkqgklladl akrlglcyvv ysglenikkl
      121 tggrltaghf dgkgeveeyf rdigvpmtsv rlpcyfenll syflpqkapd grsyllslpm
      181 gdvpidgmav adlgpvvlsl lktpeeyvgr niglstcrht aeeyaallak htgkavrdak
      241 tspedyeklg fpgardlanm frfyalkpdr nieltlklnp kartldqwle qhkgdfagl
//
LOCUS       XP_061008730             193 aa            linear   MAM 02-DEC-2023
DEFINITION  nmrA-like family domain-containing protein 1 isoform X2 [Dama
            dama].
ACCESSION   XP_061008730
VERSION     XP_061008730.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152747.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..193
                     /product="nmrA-like family domain-containing protein 1
                     isoform X2"
                     /calculated_mol_wt=20732
     Region          7..>183
                     /region_name="NmrA_like_SDR_a"
                     /note="NmrA (a transcriptional regulator) and HSCARG (an
                     NADPH sensor) like proteins, atypical (a) SDRs; cd05251"
                     /db_xref="CDD:187561"
     Site            order(11,13..16,37,79..80,82,114,133,152..155,158)
                     /site_type="other"
                     /note="NADP binding site [chemical binding]"
                     /db_xref="CDD:187561"
     Site            order(129,133)
                     /site_type="active"
                     /db_xref="CDD:187561"
     CDS             1..193
                     /gene="NMRAL1"
                     /coded_by="XM_061152747.1:165..746"
                     /db_xref="GeneID:133063407"
ORIGIN      
        1 madkklvvvf gatgaqggsv artlledgtf rvrvvtrdpg qraakqlglq gaevvqgdqd
       61 deasmelals gahaafivtn ywencspeqe vkqgklladl akrlglcyvv ysglenikkl
      121 tggrltaghf dgkgeveeyf rdigvpmtsv rlpcyfenll syflpqkapd grsyllslmg
      181 grpgvlpspa pri
//
LOCUS       XP_061008731             208 aa            linear   MAM 02-DEC-2023
DEFINITION  cell death-inducing p53-target protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061008731
VERSION     XP_061008731.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152748.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..208
                     /product="cell death-inducing p53-target protein 1 isoform
                     X1"
                     /calculated_mol_wt=21713
     Region          137..205
                     /region_name="zf-LITAF-like"
                     /note="LITAF-like zinc ribbon domain; pfam10601"
                     /db_xref="CDD:463165"
     CDS             1..208
                     /gene="CDIP1"
                     /coded_by="XM_061152748.1:222..848"
                     /db_xref="GeneID:133063408"
ORIGIN      
        1 msndppppyp ggptapllee ksgapptpgr tspavmqppp gmslppadig pppyeppghp
       61 tpqpgfipph vnadgtympp gfypppgphp pmgyyppgpy ppgpyagpgg htatvlvpsg
      121 aattvtvlqg eifegapvqt vcphcqqait tkisyeiglm nfvlgffccf mgcdlgccli
      181 pclindfkdv thtcpsckay iytykrlc
//
LOCUS       XP_061008732             208 aa            linear   MAM 02-DEC-2023
DEFINITION  cell death-inducing p53-target protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061008732
VERSION     XP_061008732.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152749.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..208
                     /product="cell death-inducing p53-target protein 1 isoform
                     X1"
                     /calculated_mol_wt=21713
     Region          137..205
                     /region_name="zf-LITAF-like"
                     /note="LITAF-like zinc ribbon domain; pfam10601"
                     /db_xref="CDD:463165"
     CDS             1..208
                     /gene="CDIP1"
                     /coded_by="XM_061152749.1:255..881"
                     /db_xref="GeneID:133063408"
ORIGIN      
        1 msndppppyp ggptapllee ksgapptpgr tspavmqppp gmslppadig pppyeppghp
       61 tpqpgfipph vnadgtympp gfypppgphp pmgyyppgpy ppgpyagpgg htatvlvpsg
      121 aattvtvlqg eifegapvqt vcphcqqait tkisyeiglm nfvlgffccf mgcdlgccli
      181 pclindfkdv thtcpsckay iytykrlc
//
LOCUS       XP_061008733             189 aa            linear   MAM 02-DEC-2023
DEFINITION  cell death-inducing p53-target protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061008733
VERSION     XP_061008733.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152750.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..189
                     /product="cell death-inducing p53-target protein 1 isoform
                     X2"
                     /calculated_mol_wt=19840
     Region          118..186
                     /region_name="zf-LITAF-like"
                     /note="LITAF-like zinc ribbon domain; pfam10601"
                     /db_xref="CDD:463165"
     CDS             1..189
                     /gene="CDIP1"
                     /coded_by="XM_061152750.1:222..791"
                     /db_xref="GeneID:133063408"
ORIGIN      
        1 msndppppyp ggptapllee ksgapptpdi gpppyeppgh ptpqpgfipp hvnadgtymp
       61 pgfypppgph ppmgyyppgp yppgpyagpg ghtatvlvps gaattvtvlq geifegapvq
      121 tvcphcqqai ttkisyeigl mnfvlgffcc fmgcdlgccl ipclindfkd vthtcpscka
      181 yiytykrlc
//
LOCUS       XP_061008735             178 aa            linear   MAM 02-DEC-2023
DEFINITION  UBA-like domain-containing protein 1 [Dama dama].
ACCESSION   XP_061008735
VERSION     XP_061008735.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152752.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..178
                     /product="UBA-like domain-containing protein 1"
                     /calculated_mol_wt=18820
     Region          10..48
                     /region_name="UBA_F100B_like"
                     /note="UBA-like domain found in protein FAM100B; cd14343"
                     /db_xref="CDD:270528"
     Region          <80..>170
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..178
                     /gene="UBALD1"
                     /coded_by="XM_061152752.1:109..645"
                     /db_xref="GeneID:133063410"
ORIGIN      
        1 msvnmdelkh qvminqfvlt agcaadqakq llqaahwqfe talsaffqet nipyshhhhq
       61 mmctpantpa tppnfpdalt mfsrlkases fhsggsgspm aatatsppph fpltatgsfa
      121 apgwpaaasp pggaqhhqpp qpplwtpapp spasdwppla pqqaasepra hpameaer
//
LOCUS       XP_061008736             575 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase MGRN1 isoform X1 [Dama dama].
ACCESSION   XP_061008736
VERSION     XP_061008736.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152753.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..575
                     /product="E3 ubiquitin-protein ligase MGRN1 isoform X1"
                     /calculated_mol_wt=62586
     Region          272..331
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(278,281,293,295,299,302,313,316)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438466"
     CDS             1..575
                     /gene="MGRN1"
                     /coded_by="XM_061152753.1:97..1824"
                     /db_xref="GeneID:133063411"
ORIGIN      
        1 mgsilsrria gvedidiqan sayryppksg nyfashffmg gekfdtphpe gylfgenmdl
       61 nflgnrpvqf pyvtpaphep vktlrslvni rkdslrlvry kdgadspted gekprvlysl
      121 eftfdadarv aitvycqave eflngtaays pkspalqset vhykrgvsqq fslpsfkidf
      181 sewkddelnf dldrgvfpvv iqamvdegdv vevtghahvl laafekhmdg sfsvkplkqk
      241 qivdrvsyll qeiygienkn nqetkpsdee nsdnssecvv clsdlrdtli lpcrhlclcn
      301 scadtlryqa sncpicrlpf rallqiravr kkpgalspis fspvlaqsmd hdehscpfkk
      361 skshpaslas kkpkretsad sippgyepis llealnglra vppagppavp taplyeeity
      421 sgvsdglsqa scplagidrr vesslqkgkp rskspdstlr spsspiheed dsealpppgg
      481 aglalssspe sfvtetvdet ssvkqgsrvp sienvlqdgs pepcgrsqpg apadvylpgw
      541 stsmetprsl hatghprppl ggpspdpraa eltpl
//
LOCUS       XP_061008737             553 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase MGRN1 isoform X2 [Dama dama].
ACCESSION   XP_061008737
VERSION     XP_061008737.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152754.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..553
                     /product="E3 ubiquitin-protein ligase MGRN1 isoform X2"
                     /calculated_mol_wt=60148
     Region          272..331
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(278,281,293,295,299,302,313,316)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438466"
     CDS             1..553
                     /gene="MGRN1"
                     /coded_by="XM_061152754.1:98..1759"
                     /db_xref="GeneID:133063411"
ORIGIN      
        1 mgsilsrria gvedidiqan sayryppksg nyfashffmg gekfdtphpe gylfgenmdl
       61 nflgnrpvqf pyvtpaphep vktlrslvni rkdslrlvry kdgadspted gekprvlysl
      121 eftfdadarv aitvycqave eflngtaays pkspalqset vhykrgvsqq fslpsfkidf
      181 sewkddelnf dldrgvfpvv iqamvdegdv vevtghahvl laafekhmdg sfsvkplkqk
      241 qivdrvsyll qeiygienkn nqetkpsdee nsdnssecvv clsdlrdtli lpcrhlclcn
      301 scadtlryqa sncpicrlpf rallqiravr kkpgalspis fspvlaqsmd hdehssadsi
      361 ppgyepisll ealnglravp pagppavpta plyeeitysg vsdglsqasc plagidrrve
      421 sslqkgkprs kspdstlrsp sspiheedds ealpppggag lalssspesf vtetvdetss
      481 vkqgsrvpsi envlqdgspe pcgrsqpgap advylpgwst smetprslha tghprpplgg
      541 pspdpraael tpl
//
LOCUS       XP_061008738             551 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase MGRN1 isoform X3 [Dama dama].
ACCESSION   XP_061008738
VERSION     XP_061008738.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152755.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..551
                     /product="E3 ubiquitin-protein ligase MGRN1 isoform X3"
                     /calculated_mol_wt=59901
     Region          272..331
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(278,281,293,295,299,302,313,316)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438466"
     CDS             1..551
                     /gene="MGRN1"
                     /coded_by="XM_061152755.1:97..1752"
                     /db_xref="GeneID:133063411"
ORIGIN      
        1 mgsilsrria gvedidiqan sayryppksg nyfashffmg gekfdtphpe gylfgenmdl
       61 nflgnrpvqf pyvtpaphep vktlrslvni rkdslrlvry kdgadspted gekprvlysl
      121 eftfdadarv aitvycqave eflngtaays pkspalqset vhykrgvsqq fslpsfkidf
      181 sewkddelnf dldrgvfpvv iqamvdegdv vevtghahvl laafekhmdg sfsvkplkqk
      241 qivdrvsyll qeiygienkn nqetkpsdee nsdnssecvv clsdlrdtli lpcrhlclcn
      301 scadtlryqa sncpicrlpf rallqiravr kkpgalspis fspvlaqsmd hdehscpfkk
      361 skshpaslas kkpkretsad sippgyepis llealnglra vppagppavp taplyeeity
      421 sgvsdglsqa scplagidrr vesslqkgkp rskspdstlr spsspiheed dsealpppgg
      481 aglalssspe sfvtetvdet ssvkqgsrvp sienvlqdgs pepcgrsqpg apadvylpal
      541 gpgscsagle e
//
LOCUS       XP_061008739             529 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase MGRN1 isoform X4 [Dama dama].
ACCESSION   XP_061008739
VERSION     XP_061008739.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152756.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..529
                     /product="E3 ubiquitin-protein ligase MGRN1 isoform X4"
                     /calculated_mol_wt=57463
     Region          272..331
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(278,281,293,295,299,302,313,316)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438466"
     CDS             1..529
                     /gene="MGRN1"
                     /coded_by="XM_061152756.1:98..1687"
                     /db_xref="GeneID:133063411"
ORIGIN      
        1 mgsilsrria gvedidiqan sayryppksg nyfashffmg gekfdtphpe gylfgenmdl
       61 nflgnrpvqf pyvtpaphep vktlrslvni rkdslrlvry kdgadspted gekprvlysl
      121 eftfdadarv aitvycqave eflngtaays pkspalqset vhykrgvsqq fslpsfkidf
      181 sewkddelnf dldrgvfpvv iqamvdegdv vevtghahvl laafekhmdg sfsvkplkqk
      241 qivdrvsyll qeiygienkn nqetkpsdee nsdnssecvv clsdlrdtli lpcrhlclcn
      301 scadtlryqa sncpicrlpf rallqiravr kkpgalspis fspvlaqsmd hdehssadsi
      361 ppgyepisll ealnglravp pagppavpta plyeeitysg vsdglsqasc plagidrrve
      421 sslqkgkprs kspdstlrsp sspiheedds ealpppggag lalssspesf vtetvdetss
      481 vkqgsrvpsi envlqdgspe pcgrsqpgap advylpalgp gscsaglee
//
LOCUS       XP_061008740             657 aa            linear   MAM 02-DEC-2023
DEFINITION  ankyrin repeat and SAM domain-containing protein 3 isoform X1 [Dama
            dama].
ACCESSION   XP_061008740
VERSION     XP_061008740.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152757.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..657
                     /product="ankyrin repeat and SAM domain-containing protein
                     3 isoform X1"
                     /calculated_mol_wt=71966
     Region          38..224
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          39..66
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          69..99
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(70,74..75,78..80,82..83,87,90,99,101,103,107..108,
                     111..113,115..116,120,123,132,134,136,140..141,144..146,
                     148..149,153,156)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          101..132
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          134..164
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          168..199
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          424..487
                     /region_name="SAM_ANKS3"
                     /note="SAM domain of ANKS3 subfamily; cd09519"
                     /db_xref="CDD:188918"
     CDS             1..657
                     /gene="ANKS3"
                     /coded_by="XM_061152757.1:305..2278"
                     /db_xref="GeneID:133063412"
ORIGIN      
        1 mselsdease pelldrslsm whglgtqvsr eelavpldlh taasigqyev vkecvqrrel
       61 dlnkkngggw tplmyasyig hdtivhllle agvsvnvptp egqtplmlas scgnesiayf
      121 llqqgaelem kdiqgwtalf hctsaghqqm vkflldsgan anvrepvygf tplmeaaaag
      181 heiivqyfln hgvrvdtrdh sgatarmlar qyghmkivgl idahspslpk slyrgpgkky
      241 edlsssdecg svpprqrpcr kkglsihegp ralaritaig lggraqqpry eqvpprgyvs
      301 fnssdehple ggglcyrdvt spinerdves sssssreeqa fsanpgvvrs ssseglarap
      361 glsseasles nedsdhvrrs svrkqtksyv ktknrysssd sqwapstats capgtspqtd
      421 rppysgpqdl atlleqigcl kylqvfeeqd vdlrifltlt esdlkeigit lfgpkrkmts
      481 aiarwhssar ppsdalelay adrleaemqe laiqlhkrce eveamrglvs qeqelravve
      541 sclleqdgar kdvhaqlqet walakdaalv ldqlracqae lsarvrrdes lreaplspgl
      601 paadpkgwqa slqalslpel sgaleervre mgrvlcsvtq sleklqalsg keswrep
//
LOCUS       XP_061008741             657 aa            linear   MAM 02-DEC-2023
DEFINITION  ankyrin repeat and SAM domain-containing protein 3 isoform X1 [Dama
            dama].
ACCESSION   XP_061008741
VERSION     XP_061008741.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152758.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..657
                     /product="ankyrin repeat and SAM domain-containing protein
                     3 isoform X1"
                     /calculated_mol_wt=71966
     Region          38..224
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          39..66
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          69..99
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(70,74..75,78..80,82..83,87,90,99,101,103,107..108,
                     111..113,115..116,120,123,132,134,136,140..141,144..146,
                     148..149,153,156)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          101..132
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          134..164
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          168..199
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          424..487
                     /region_name="SAM_ANKS3"
                     /note="SAM domain of ANKS3 subfamily; cd09519"
                     /db_xref="CDD:188918"
     CDS             1..657
                     /gene="ANKS3"
                     /coded_by="XM_061152758.1:305..2278"
                     /db_xref="GeneID:133063412"
ORIGIN      
        1 mselsdease pelldrslsm whglgtqvsr eelavpldlh taasigqyev vkecvqrrel
       61 dlnkkngggw tplmyasyig hdtivhllle agvsvnvptp egqtplmlas scgnesiayf
      121 llqqgaelem kdiqgwtalf hctsaghqqm vkflldsgan anvrepvygf tplmeaaaag
      181 heiivqyfln hgvrvdtrdh sgatarmlar qyghmkivgl idahspslpk slyrgpgkky
      241 edlsssdecg svpprqrpcr kkglsihegp ralaritaig lggraqqpry eqvpprgyvs
      301 fnssdehple ggglcyrdvt spinerdves sssssreeqa fsanpgvvrs ssseglarap
      361 glsseasles nedsdhvrrs svrkqtksyv ktknrysssd sqwapstats capgtspqtd
      421 rppysgpqdl atlleqigcl kylqvfeeqd vdlrifltlt esdlkeigit lfgpkrkmts
      481 aiarwhssar ppsdalelay adrleaemqe laiqlhkrce eveamrglvs qeqelravve
      541 sclleqdgar kdvhaqlqet walakdaalv ldqlracqae lsarvrrdes lreaplspgl
      601 paadpkgwqa slqalslpel sgaleervre mgrvlcsvtq sleklqalsg keswrep
//
LOCUS       XP_061008743             656 aa            linear   MAM 02-DEC-2023
DEFINITION  ankyrin repeat and SAM domain-containing protein 3 isoform X2 [Dama
            dama].
ACCESSION   XP_061008743
VERSION     XP_061008743.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152760.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..656
                     /product="ankyrin repeat and SAM domain-containing protein
                     3 isoform X2"
                     /calculated_mol_wt=71910
     Region          38..224
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          39..66
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          69..99
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(70,74..75,78..80,82..83,87,90,99,101,103,107..108,
                     111..113,115..116,120,123,132,134,136,140..141,144..146,
                     148..149,153,156)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          101..132
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          134..164
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          168..199
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          423..486
                     /region_name="SAM_ANKS3"
                     /note="SAM domain of ANKS3 subfamily; cd09519"
                     /db_xref="CDD:188918"
     CDS             1..656
                     /gene="ANKS3"
                     /coded_by="XM_061152760.1:305..2275"
                     /db_xref="GeneID:133063412"
ORIGIN      
        1 mselsdease pelldrslsm whglgtqvsr eelavpldlh taasigqyev vkecvqrrel
       61 dlnkkngggw tplmyasyig hdtivhllle agvsvnvptp egqtplmlas scgnesiayf
      121 llqqgaelem kdiqgwtalf hctsaghqqm vkflldsgan anvrepvygf tplmeaaaag
      181 heiivqyfln hgvrvdtrdh sgatarmlar qyghmkivgl idahspslpk slyrgpekye
      241 dlsssdecgs vpprqrpcrk kglsihegpr alaritaigl ggraqqprye qvpprgyvsf
      301 nssdehpleg gglcyrdvts pinerdvess ssssreeqaf sanpgvvrss sseglarapg
      361 lsseaslesn edsdhvrrss vrkqtksyvk tknrysssds qwapstatsc apgtspqtdr
      421 ppysgpqdla tlleqigclk ylqvfeeqdv dlrifltlte sdlkeigitl fgpkrkmtsa
      481 iarwhssarp psdalelaya drleaemqel aiqlhkrcee veamrglvsq eqelravves
      541 clleqdgark dvhaqlqetw alakdaalvl dqlracqael sarvrrdesl reaplspglp
      601 aadpkgwqas lqalslpels galeervrem grvlcsvtqs leklqalsgk eswrep
//
LOCUS       XP_061008744             656 aa            linear   MAM 02-DEC-2023
DEFINITION  ankyrin repeat and SAM domain-containing protein 3 isoform X3 [Dama
            dama].
ACCESSION   XP_061008744
VERSION     XP_061008744.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152761.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..656
                     /product="ankyrin repeat and SAM domain-containing protein
                     3 isoform X3"
                     /calculated_mol_wt=71837
     Region          38..224
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          39..66
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          69..99
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(70,74..75,78..80,82..83,87,90,99,101,103,107..108,
                     111..113,115..116,120,123,132,134,136,140..141,144..146,
                     148..149,153,156)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          101..132
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          134..164
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          168..199
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          423..486
                     /region_name="SAM_ANKS3"
                     /note="SAM domain of ANKS3 subfamily; cd09519"
                     /db_xref="CDD:188918"
     CDS             1..656
                     /gene="ANKS3"
                     /coded_by="XM_061152761.1:305..2275"
                     /db_xref="GeneID:133063412"
ORIGIN      
        1 mselsdease pelldrslsm whglgtqvsr eelavpldlh taasigqyev vkecvqrrel
       61 dlnkkngggw tplmyasyig hdtivhllle agvsvnvptp egqtplmlas scgnesiayf
      121 llqqgaelem kdiqgwtalf hctsaghqqm vkflldsgan anvrepvygf tplmeaaaag
      181 heiivqyfln hgvrvdtrdh sgatarmlar qyghmkivgl idahspslpk slyrgpgkky
      241 edlsssdecg svpprqrpcr kkglsihegp ralaritaig lggraqqpry eqvpprgyvs
      301 fnssdehple ggglcyrdvt spinerdves sssssreqaf sanpgvvrss sseglarapg
      361 lsseaslesn edsdhvrrss vrkqtksyvk tknrysssds qwapstatsc apgtspqtdr
      421 ppysgpqdla tlleqigclk ylqvfeeqdv dlrifltlte sdlkeigitl fgpkrkmtsa
      481 iarwhssarp psdalelaya drleaemqel aiqlhkrcee veamrglvsq eqelravves
      541 clleqdgark dvhaqlqetw alakdaalvl dqlracqael sarvrrdesl reaplspglp
      601 aadpkgwqas lqalslpels galeervrem grvlcsvtqs leklqalsgk eswrep
//
LOCUS       XP_061008745             211 aa            linear   MAM 02-DEC-2023
DEFINITION  tudor-interacting repair regulator protein isoform X1 [Dama dama].
ACCESSION   XP_061008745
VERSION     XP_061008745.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152762.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..211
                     /product="tudor-interacting repair regulator protein
                     isoform X1"
                     /calculated_mol_wt=23297
     Region          23..184
                     /region_name="NUDIX_U8_SnoRNA_DE_Nudt16"
                     /note="nucleoside diphosphate-linked moiety X)) motif 16;
                     cd18869"
                     /db_xref="CDD:467581"
     CDS             1..211
                     /gene="NUDT16L1"
                     /coded_by="XM_061152762.1:22..657"
                     /db_xref="GeneID:133063413"
ORIGIN      
        1 msatavpelk risrveamrl gpgwshscha mlyaanpgql fgripmrfsv lmqmrfdgll
       61 gfpggfvdrr fwsledglnr vlglglgclr lteadylssh ltegphrvva hlyarqltle
      121 qlhaveisav hsrdhglevl glvrvplytq kdrvggfpnf lsnafistak yqllfalkvl
      181 nmmpeeklae alaaatekqk kalekllpss s
//
LOCUS       XP_061008746             171 aa            linear   MAM 02-DEC-2023
DEFINITION  tudor-interacting repair regulator protein isoform X2 [Dama dama].
ACCESSION   XP_061008746
VERSION     XP_061008746.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152763.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..171
                     /product="tudor-interacting repair regulator protein
                     isoform X2"
                     /calculated_mol_wt=18829
     Region          23..>142
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
     CDS             1..171
                     /gene="NUDT16L1"
                     /coded_by="XM_061152763.1:22..537"
                     /db_xref="GeneID:133063413"
ORIGIN      
        1 msatavpelk risrveamrl gpgwshscha mlyaanpgql fgripmrfsv lmqmrfdgll
       61 gfpggfvdrr fwsledglnr vlglglgclr lteadylssh ltegphrvva hlyarqltle
      121 qlhaveisav hsrdhglevl nmmpeeklae alaaatekqk kalekllpss s
//
LOCUS       XP_061008747             607 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 500 isoform X1 [Dama dama].
ACCESSION   XP_061008747
VERSION     XP_061008747.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152764.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..607
                     /product="zinc finger protein 500 isoform X1"
                     /calculated_mol_wt=66223
     Region          149..255
                     /region_name="SCAN"
                     /note="leucine rich region; smart00431"
                     /db_xref="CDD:128708"
     Region          333..381
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          432..>575
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          455..475
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(460,462,464,466..467,470..471,474,488,490,494..495,
                     498..499,502,516,518,520,522..523,526..527,530)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          483..503
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(483,486,499,503)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          511..531
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          539..559
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          565..587
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          567..587
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..607
                     /gene="ZNF500"
                     /coded_by="XM_061152764.1:126..1949"
                     /db_xref="GeneID:133063414"
ORIGIN      
        1 mlpvggprgl alqldarlsq wslpsvrvcd arilvlvsgp prppyplshs gstpqhrpaa
       61 tsprvavlss penifpsvwp evqgetgvis rpgkgqgppg amatapgcqs lapleqegdv
      121 legdilvvkv eddycweeep sseaedpspe tfrqlfrlfc yqevagprea lsrlwelccr
      181 wlrpelrtke qilellvleq fltvlpgeiq arvreqqpes geeavvlveg lqreprkqrp
      241 rdpellpdda lshgteewfs khqveaqpee lslgegaqds sqpppaqlsh rprgdpslwp
      301 krgpaasrhq etaalatsfl sawsqvpval ggvamylsqe ewgcldlaqq dhscdvlled
      361 aglptpgpcl talqgrgegp wdparaasgp revsggassg rgrrleaged agedaslstg
      421 waharpdlgp gpgqtrpqqp qdragplgvr kphacpecgk afrktshlak hqrthtgerp
      481 yqcqvcgkrf gdrsncsthq rvhtgekpya caecgkrfsq ssslvihrrt htgerpyqcq
      541 lcgkrfnnss hfsahrrtht gekphtcpac grgfrrgtdl rkhqrthgge qpphrpaglq
      601 dtpgawa
//
LOCUS       XP_061008748             506 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 500 isoform X2 [Dama dama].
ACCESSION   XP_061008748
VERSION     XP_061008748.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152765.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..506
                     /product="zinc finger protein 500 isoform X2"
                     /calculated_mol_wt=55695
     Region          48..154
                     /region_name="SCAN"
                     /note="leucine rich region; smart00431"
                     /db_xref="CDD:128708"
     Region          232..280
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          331..>474
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          354..374
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(359,361,363,365..366,369..370,373,387,389,393..394,
                     397..398,401,415,417,419,421..422,425..426,429)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          382..402
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(382,385,398,402)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          410..430
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          438..458
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          464..486
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          466..486
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..506
                     /gene="ZNF500"
                     /coded_by="XM_061152765.1:3519..5039"
                     /db_xref="GeneID:133063414"
ORIGIN      
        1 matapgcqsl apleqegdvl egdilvvkve ddycweeeps seaedpspet frqlfrlfcy
       61 qevagpreal srlwelccrw lrpelrtkeq ilellvleqf ltvlpgeiqa rvreqqpesg
      121 eeavvlvegl qreprkqrpr dpellpddal shgteewfsk hqveaqpeel slgegaqdss
      181 qpppaqlshr prgdpslwpk rgpaasrhqe taalatsfls awsqvpvalg gvamylsqee
      241 wgcldlaqqd hscdvlleda glptpgpclt alqgrgegpw dparaasgpr evsggassgr
      301 grrleageda gedaslstgw aharpdlgpg pgqtrpqqpq dragplgvrk phacpecgka
      361 frktshlakh qrthtgerpy qcqvcgkrfg drsncsthqr vhtgekpyac aecgkrfsqs
      421 sslvihrrth tgerpyqcql cgkrfnnssh fsahrrthtg ekphtcpacg rgfrrgtdlr
      481 khqrthggeq pphrpaglqd tpgawa
//
LOCUS       XP_061008749             506 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 500 isoform X2 [Dama dama].
ACCESSION   XP_061008749
VERSION     XP_061008749.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152766.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..506
                     /product="zinc finger protein 500 isoform X2"
                     /calculated_mol_wt=55695
     Region          48..154
                     /region_name="SCAN"
                     /note="leucine rich region; smart00431"
                     /db_xref="CDD:128708"
     Region          232..280
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          331..>474
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          354..374
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(359,361,363,365..366,369..370,373,387,389,393..394,
                     397..398,401,415,417,419,421..422,425..426,429)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          382..402
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(382,385,398,402)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          410..430
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          438..458
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          464..486
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          466..486
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..506
                     /gene="ZNF500"
                     /coded_by="XM_061152766.1:662..2182"
                     /db_xref="GeneID:133063414"
ORIGIN      
        1 matapgcqsl apleqegdvl egdilvvkve ddycweeeps seaedpspet frqlfrlfcy
       61 qevagpreal srlwelccrw lrpelrtkeq ilellvleqf ltvlpgeiqa rvreqqpesg
      121 eeavvlvegl qreprkqrpr dpellpddal shgteewfsk hqveaqpeel slgegaqdss
      181 qpppaqlshr prgdpslwpk rgpaasrhqe taalatsfls awsqvpvalg gvamylsqee
      241 wgcldlaqqd hscdvlleda glptpgpclt alqgrgegpw dparaasgpr evsggassgr
      301 grrleageda gedaslstgw aharpdlgpg pgqtrpqqpq dragplgvrk phacpecgka
      361 frktshlakh qrthtgerpy qcqvcgkrfg drsncsthqr vhtgekpyac aecgkrfsqs
      421 sslvihrrth tgerpyqcql cgkrfnnssh fsahrrthtg ekphtcpacg rgfrrgtdlr
      481 khqrthggeq pphrpaglqd tpgawa
//
LOCUS       XP_061008750             506 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 500 isoform X2 [Dama dama].
ACCESSION   XP_061008750
VERSION     XP_061008750.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152767.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..506
                     /product="zinc finger protein 500 isoform X2"
                     /calculated_mol_wt=55695
     Region          48..154
                     /region_name="SCAN"
                     /note="leucine rich region; smart00431"
                     /db_xref="CDD:128708"
     Region          232..280
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          331..>474
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          354..374
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(359,361,363,365..366,369..370,373,387,389,393..394,
                     397..398,401,415,417,419,421..422,425..426,429)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          382..402
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(382,385,398,402)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          410..430
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          438..458
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          464..486
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          466..486
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..506
                     /gene="ZNF500"
                     /coded_by="XM_061152767.1:864..2384"
                     /db_xref="GeneID:133063414"
ORIGIN      
        1 matapgcqsl apleqegdvl egdilvvkve ddycweeeps seaedpspet frqlfrlfcy
       61 qevagpreal srlwelccrw lrpelrtkeq ilellvleqf ltvlpgeiqa rvreqqpesg
      121 eeavvlvegl qreprkqrpr dpellpddal shgteewfsk hqveaqpeel slgegaqdss
      181 qpppaqlshr prgdpslwpk rgpaasrhqe taalatsfls awsqvpvalg gvamylsqee
      241 wgcldlaqqd hscdvlleda glptpgpclt alqgrgegpw dparaasgpr evsggassgr
      301 grrleageda gedaslstgw aharpdlgpg pgqtrpqqpq dragplgvrk phacpecgka
      361 frktshlakh qrthtgerpy qcqvcgkrfg drsncsthqr vhtgekpyac aecgkrfsqs
      421 sslvihrrth tgerpyqcql cgkrfnnssh fsahrrthtg ekphtcpacg rgfrrgtdlr
      481 khqrthggeq pphrpaglqd tpgawa
//
LOCUS       XP_061008751             506 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 500 isoform X2 [Dama dama].
ACCESSION   XP_061008751
VERSION     XP_061008751.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152768.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..506
                     /product="zinc finger protein 500 isoform X2"
                     /calculated_mol_wt=55695
     Region          48..154
                     /region_name="SCAN"
                     /note="leucine rich region; smart00431"
                     /db_xref="CDD:128708"
     Region          232..280
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          331..>474
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          354..374
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(359,361,363,365..366,369..370,373,387,389,393..394,
                     397..398,401,415,417,419,421..422,425..426,429)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          382..402
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(382,385,398,402)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          410..430
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          438..458
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          464..486
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          466..486
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..506
                     /gene="ZNF500"
                     /coded_by="XM_061152768.1:269..1789"
                     /db_xref="GeneID:133063414"
ORIGIN      
        1 matapgcqsl apleqegdvl egdilvvkve ddycweeeps seaedpspet frqlfrlfcy
       61 qevagpreal srlwelccrw lrpelrtkeq ilellvleqf ltvlpgeiqa rvreqqpesg
      121 eeavvlvegl qreprkqrpr dpellpddal shgteewfsk hqveaqpeel slgegaqdss
      181 qpppaqlshr prgdpslwpk rgpaasrhqe taalatsfls awsqvpvalg gvamylsqee
      241 wgcldlaqqd hscdvlleda glptpgpclt alqgrgegpw dparaasgpr evsggassgr
      301 grrleageda gedaslstgw aharpdlgpg pgqtrpqqpq dragplgvrk phacpecgka
      361 frktshlakh qrthtgerpy qcqvcgkrfg drsncsthqr vhtgekpyac aecgkrfsqs
      421 sslvihrrth tgerpyqcql cgkrfnnssh fsahrrthtg ekphtcpacg rgfrrgtdlr
      481 khqrthggeq pphrpaglqd tpgawa
//
LOCUS       XP_061008752             323 aa            linear   MAM 02-DEC-2023
DEFINITION  endogenous retrovirus group PABLB member 1 Env polyprotein-like
            [Dama dama].
ACCESSION   XP_061008752
VERSION     XP_061008752.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152769.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..323
                     /product="endogenous retrovirus group PABLB member 1 Env
                     polyprotein-like"
                     /calculated_mol_wt=36964
     CDS             1..323
                     /gene="LOC133063416"
                     /coded_by="XM_061152769.1:525..1496"
                     /db_xref="GeneID:133063416"
ORIGIN      
        1 msllamlrlc tfqmgliiyv slllltpeil slpfdpqdna flswahsyaa fhnqsncwvc
       61 galpsssveg fpwwtaplqg kdflqvckyl rqqsrvmpll hhlmtsnspg mdwcntlyln
      121 yghnvtfnfn ytlsqfndyf aahktnrsrs dgflpdvyqi wdeviwltpe kgrlistapi
      181 cweqiepspk vgqqlnyndw ktvgflsqei cnviipvfsn pssgspfvwp gtnwdwisqs
      241 rwlapngtyw icgsylwawl ppgwigrctl glafthgfif selperpanl phlktrwars
      301 vfhwydylaa vfvpslgtad vml
//
LOCUS       XP_061008753             287 aa            linear   MAM 02-DEC-2023
DEFINITION  protein rogdi homolog isoform X1 [Dama dama].
ACCESSION   XP_061008753
VERSION     XP_061008753.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152770.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..287
                     /product="protein rogdi homolog isoform X1"
                     /calculated_mol_wt=32155
     Region          18..276
                     /region_name="Rogdi_lz"
                     /note="Rogdi leucine zipper containing protein; pfam10259"
                     /db_xref="CDD:463031"
     CDS             1..287
                     /gene="ROGDI"
                     /coded_by="XM_061152770.1:58..921"
                     /db_xref="GeneID:133063417"
ORIGIN      
        1 matvmaataa eravleeefr wllhdevhav lrqlqdilke aslrftlpgp gtegptkqen
       61 fvlgscgtdq vkgvltlqgd alsqadvnlk mprnnqllhf afredkqwkl qqiqdarnhv
      121 sqaiyllanr desyqfrtga evlklmdavm lqltrarnrl ttpatltlpe iaasgltrmf
      181 aptlpsdllv nvyinlnklc ltvyqlhalq pnstknfrpa ggavlhspga mfewgtqrle
      241 vshvhkvesv ipwlndalvf ftvslqlcqq lkdkisvfss ywscrpf
//
LOCUS       XP_061008754             266 aa            linear   MAM 02-DEC-2023
DEFINITION  protein rogdi homolog isoform X2 [Dama dama].
ACCESSION   XP_061008754
VERSION     XP_061008754.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152771.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..266
                     /product="protein rogdi homolog isoform X2"
                     /calculated_mol_wt=29774
     Region          17..255
                     /region_name="Rogdi_lz"
                     /note="Rogdi leucine zipper containing protein; pfam10259"
                     /db_xref="CDD:463031"
     CDS             1..266
                     /gene="ROGDI"
                     /coded_by="XM_061152771.1:52..852"
                     /db_xref="GeneID:133063417"
ORIGIN      
        1 mghvvgpqgm wkervwvqea slrftlpgpg tegptkqenf vlgscgtdqv kgvltlqgda
       61 lsqadvnlkm prnnqllhfa fredkqwklq qiqdarnhvs qaiyllanrd esyqfrtgae
      121 vlklmdavml qltrarnrlt tpatltlpei aasgltrmfa ptlpsdllvn vyinlnklcl
      181 tvyqlhalqp nstknfrpag gavlhspgam fewgtqrlev shvhkvesvi pwlndalvff
      241 tvslqlcqql kdkisvfssy wscrpf
//
LOCUS       XP_061008756            1755 aa            linear   MAM 02-DEC-2023
DEFINITION  periplakin [Dama dama].
ACCESSION   XP_061008756
VERSION     XP_061008756.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152773.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1755
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1755
                     /product="periplakin"
                     /calculated_mol_wt=202789
     Region          211..385
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            315..320
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          386..449
                     /region_name="SH3_10"
                     /note="SH3 domain; pfam17902"
                     /db_xref="CDD:407754"
     Region          <462..1102
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          <942..>1488
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          <1360..>1673
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..1755
                     /gene="PPL"
                     /coded_by="XM_061152773.1:60..5327"
                     /db_xref="GeneID:133063418"
ORIGIN      
        1 mnslfrkrnk gkysptvrtr svsnkelsel ieqlqknadq vernivdtea kmqsdlarlq
       61 egrqpeyrdv alqkvsdsek llyvleadaa iakhmkhpqg dmiaedirql kervtnlrgk
      121 hkqiynlvvk evdpqvnwea lveekldkls sqsfgtdlpl vdqqveqhni fhnevkaigp
      181 hlakeqnsel qakyqkllaa sqarqrhlss lqdymqrctn elywldqqar griqydwsdr
      241 nlsypsrrrq yenfihrnle akeerinklh segdqllaae hpgrnsieah meavhadwke
      301 ylnllicees hlkymedyhq fhkdmkdaqe llrkvdsdln qkyspdfkdr yqielllrel
      361 ddqekaldky ehvvrglqkr gqqvvplkfr retplkpipv ealcdfecdq glisrgysyt
      421 lqknngeswd ltdsagnelt apavcfmipp tdpealalad slgsqyqslr qkaagsrkvl
      481 qqrhevlkae ssgdasdlqg rqllasldkv asdldrqeka itailrpple qgravqdsae
      541 rakdlknitn ellriepeka rstaegeafv ralpdsgsta llrtrvedtq rryqrlvqll
      601 eaaqekvdia nrlekslqqg remlatyetq laqedtvpes gqaldsrrqe ltamaselqa
      661 rkallgevqr nlqaakqcsg slasrfqehc pdlerqeaev qklcqrfdgl cqqaelraqs
      721 lqsaraehda fcsgrdrllq flshipsyep qetdglgqve tklnnqknll deiarreeev
      781 qkvhmhsqqy qqavkdyele aeklrslldl engrnshvsk rarlqspaak vreeeaalaa
      841 kftevnainr qrlqnlefal illrqqpeag asqealpgsk pgpgaeetwk iqkeldeete
      901 rrqqlehevr saqeeiralr sqspqeavvt kevlrkvpdp vleesfqqaq qtlaeeqrkn
      961 rllqgeveal rlrlraleee araggqeyvv kevlriepdr aqadevlrlr gelealrrqk
     1021 gareaealll qqrvaalaee kqrarevvte kevvkvhndp qleaefrqlq edqrreqglr
     1081 ekqeeelgfl qdklkrleke ramaegkitv kevlkvekda aaerevgalq rqyedeaara
     1141 rasqrektel lrkiwaleee nakvvvqekv reivrpdpka esevanlrle lveqerkyrg
     1201 aeeqlksyqs elealrrrgp qvevkevtke vikyttdpet ekelqrlree ivdktrlier
     1261 cdleiyqlkq eiqslkeakp qvqtkevvqe ilqfqedpqt keevvalrar laeehkkqvd
     1321 lererasqee kiqekeeela rgkevvvqqe vvryeeepgl raevsafaes idaelrqids
     1381 lrgelrrlqr rraelerqle elererqarh aaelevqrlk qrlaqleaqe gearekvtlt
     1441 qkvvlqqdpq qarehallar qleeerhrrq gleheletlk qqlerlekme vkekvvfses
     1501 vqlekgdteq eiqrlrgsle aesrgkreld aevsrleakl selefcnsks skeldflree
     1561 nhklqlerqs lqlearrlqs eiemaaaeaq glrslpatag adpgaqldsr lrslereldd
     1621 lrrlsrdkdq eieelqrrlg svavkreqre nhlrrsivvi dpdsgrelsp eeahriglid
     1681 wnmfvklrsq ecdweeisvk gpggessvih drksgkkfsi eealqsgrlt paqydryvnk
     1741 smsiqelavl vsgqk
//
LOCUS       XP_061008757            1135 aa            linear   MAM 02-DEC-2023
DEFINITION  ubinuclein-1 isoform X1 [Dama dama].
ACCESSION   XP_061008757
VERSION     XP_061008757.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152774.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1135
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1135
                     /product="ubinuclein-1 isoform X1"
                     /calculated_mol_wt=121445
     Region          117..168
                     /region_name="HUN"
                     /note="HPC2 and ubinuclein domain; pfam08729"
                     /db_xref="CDD:462581"
     Region          353..573
                     /region_name="UBN_AB"
                     /note="Ubinuclein conserved middle domain; pfam14075"
                     /db_xref="CDD:464081"
     Region          <788..995
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     CDS             1..1135
                     /gene="UBN1"
                     /coded_by="XM_061152774.1:190..3597"
                     /db_xref="GeneID:133063419"
ORIGIN      
        1 msephrvqft slpgslnpaf lkksrkeevg gaeqhqdsep aaaavritlt lfepdhkrcp
       61 effypelvkn lrgkvkglqp adkkkdlldp fndeekerhk vealarkfee kyggkkrrkd
      121 riqdlidmgy gydesdsfid nseaydelvp aslttkyggf yinsgtlqfr qaseseddfi
      181 kekkkkspkk rklkeggeki kkkkkddtyd kekkskkskf skagftalna skekkkkkys
      241 aalsvkemlk kfqkekeaqr krdeehkpia vssaeaqglr elegasdpll slfgsasdnd
      301 llqaatamds ltdldleqll sespegspfh dmddesdslg vgldqefrqp sslpeglpap
      361 lekrvkelaq aaraaegesr qkfftqding illdieaqtr elssqtrsgv yaylasflpc
      421 skdtlvkrar klhlceqqgg rlkeplqklk eaigrampeq makyqdecqa htqakvakml
      481 eeekdkeqre rvcsdeeede ekggrrimgp rkkfqwsdei rellcqvvki klesfdleks
      541 kaqswedyvk afldaevkpl wpkgwmqart lfkesrrghg hltsvlakkk vmasskmkvk
      601 essakpdkkv sissgqmgsp lalpsehlgg glgmgaasre lssqasgsla hpapinleds
      661 ldgdlvhnsa ssleamskel avlnsraggs sefplpapvk vpaekvagvl cpeekrnfpk
      721 pspssappps sslqsplnfl aeqalalgqs sqekkaessg ykelscqaal gkgppegqql
      781 kakhhglprt shappagttm pspqvkvfha gsqpqksftp papfinklqg pkpgspqchr
      841 sllqlvktat ksqsfhastp assggtpass ssshktpasc saavshpakp hsasssgpty
      901 ktspflgsas khgvsscsps sggtpvqspa sgnllpaaqp pstgqsagrp ipgpavkkpp
      961 vpqkltlvap pggpngdssg gtqgvakllt sslkpsavss vtsstslpkg asgavlltgs
     1021 splnllsssy kagspklpga lnssplgiis qlplhvisfs adssakagvs kdaivtgpap
     1081 gtfhhglghs llagvhsspp raaplphtav sahlpqslpd asqlhgkgps vprkl
//
LOCUS       XP_061008758            1135 aa            linear   MAM 02-DEC-2023
DEFINITION  ubinuclein-1 isoform X1 [Dama dama].
ACCESSION   XP_061008758
VERSION     XP_061008758.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152775.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1135
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1135
                     /product="ubinuclein-1 isoform X1"
                     /calculated_mol_wt=121445
     Region          117..168
                     /region_name="HUN"
                     /note="HPC2 and ubinuclein domain; pfam08729"
                     /db_xref="CDD:462581"
     Region          353..573
                     /region_name="UBN_AB"
                     /note="Ubinuclein conserved middle domain; pfam14075"
                     /db_xref="CDD:464081"
     Region          <788..995
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     CDS             1..1135
                     /gene="UBN1"
                     /coded_by="XM_061152775.1:264..3671"
                     /db_xref="GeneID:133063419"
ORIGIN      
        1 msephrvqft slpgslnpaf lkksrkeevg gaeqhqdsep aaaavritlt lfepdhkrcp
       61 effypelvkn lrgkvkglqp adkkkdlldp fndeekerhk vealarkfee kyggkkrrkd
      121 riqdlidmgy gydesdsfid nseaydelvp aslttkyggf yinsgtlqfr qaseseddfi
      181 kekkkkspkk rklkeggeki kkkkkddtyd kekkskkskf skagftalna skekkkkkys
      241 aalsvkemlk kfqkekeaqr krdeehkpia vssaeaqglr elegasdpll slfgsasdnd
      301 llqaatamds ltdldleqll sespegspfh dmddesdslg vgldqefrqp sslpeglpap
      361 lekrvkelaq aaraaegesr qkfftqding illdieaqtr elssqtrsgv yaylasflpc
      421 skdtlvkrar klhlceqqgg rlkeplqklk eaigrampeq makyqdecqa htqakvakml
      481 eeekdkeqre rvcsdeeede ekggrrimgp rkkfqwsdei rellcqvvki klesfdleks
      541 kaqswedyvk afldaevkpl wpkgwmqart lfkesrrghg hltsvlakkk vmasskmkvk
      601 essakpdkkv sissgqmgsp lalpsehlgg glgmgaasre lssqasgsla hpapinleds
      661 ldgdlvhnsa ssleamskel avlnsraggs sefplpapvk vpaekvagvl cpeekrnfpk
      721 pspssappps sslqsplnfl aeqalalgqs sqekkaessg ykelscqaal gkgppegqql
      781 kakhhglprt shappagttm pspqvkvfha gsqpqksftp papfinklqg pkpgspqchr
      841 sllqlvktat ksqsfhastp assggtpass ssshktpasc saavshpakp hsasssgpty
      901 ktspflgsas khgvsscsps sggtpvqspa sgnllpaaqp pstgqsagrp ipgpavkkpp
      961 vpqkltlvap pggpngdssg gtqgvakllt sslkpsavss vtsstslpkg asgavlltgs
     1021 splnllsssy kagspklpga lnssplgiis qlplhvisfs adssakagvs kdaivtgpap
     1081 gtfhhglghs llagvhsspp raaplphtav sahlpqslpd asqlhgkgps vprkl
//
LOCUS       XP_061008759            1134 aa            linear   MAM 02-DEC-2023
DEFINITION  ubinuclein-1 isoform X2 [Dama dama].
ACCESSION   XP_061008759
VERSION     XP_061008759.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152776.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1134
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1134
                     /product="ubinuclein-1 isoform X2"
                     /calculated_mol_wt=121317
     Region          117..168
                     /region_name="HUN"
                     /note="HPC2 and ubinuclein domain; pfam08729"
                     /db_xref="CDD:462581"
     Region          353..572
                     /region_name="UBN_AB"
                     /note="Ubinuclein conserved middle domain; pfam14075"
                     /db_xref="CDD:464081"
     Region          <792..994
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     CDS             1..1134
                     /gene="UBN1"
                     /coded_by="XM_061152776.1:190..3594"
                     /db_xref="GeneID:133063419"
ORIGIN      
        1 msephrvqft slpgslnpaf lkksrkeevg gaeqhqdsep aaaavritlt lfepdhkrcp
       61 effypelvkn lrgkvkglqp adkkkdlldp fndeekerhk vealarkfee kyggkkrrkd
      121 riqdlidmgy gydesdsfid nseaydelvp aslttkyggf yinsgtlqfr qaseseddfi
      181 kekkkkspkk rklkeggeki kkkkkddtyd kekkskkskf skagftalna skekkkkkys
      241 aalsvkemlk kfqkekeaqr krdeehkpia vssaeaqglr elegasdpll slfgsasdnd
      301 llqaatamds ltdldleqll sespegspfh dmddesdslg vgldqefrqp sslpeglpap
      361 lekrvkelaq aaraaegesr qkfftqding illdieaqtr elssqtrsgv yaylasflpc
      421 skdtlvkrar klhlceqggr lkeplqklke aigrampeqm akyqdecqah tqakvakmle
      481 eekdkeqrer vcsdeeedee kggrrimgpr kkfqwsdeir ellcqvvkik lesfdleksk
      541 aqswedyvka fldaevkplw pkgwmqartl fkesrrghgh ltsvlakkkv masskmkvke
      601 ssakpdkkvs issgqmgspl alpsehlggg lgmgaasrel ssqasgslah papinledsl
      661 dgdlvhnsas sleamskela vlnsraggss efplpapvkv paekvagvlc peekrnfpkp
      721 spssapppss slqsplnfla eqalalgqss qekkaessgy kelscqaalg kgppegqqlk
      781 akhhglprts happagttmp spqvkvfhag sqpqksftpp apfinklqgp kpgspqchrs
      841 llqlvktatk sqsfhastpa ssggtpasss sshktpascs aavshpakph sasssgptyk
      901 tspflgsask hgvsscspss ggtpvqspas gnllpaaqpp stgqsagrpi pgpavkkppv
      961 pqkltlvapp ggpngdssgg tqgvakllts slkpsavssv tsstslpkga sgavlltgss
     1021 plnllsssyk agspklpgal nssplgiisq lplhvisfsa dssakagvsk daivtgpapg
     1081 tfhhglghsl lagvhssppr aaplphtavs ahlpqslpda sqlhgkgpsv prkl
//
LOCUS       XP_061008760            1015 aa            linear   MAM 02-DEC-2023
DEFINITION  ubinuclein-1 isoform X3 [Dama dama].
ACCESSION   XP_061008760
VERSION     XP_061008760.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152777.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1015
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1015
                     /product="ubinuclein-1 isoform X3"
                     /calculated_mol_wt=109659
     Region          117..168
                     /region_name="HUN"
                     /note="HPC2 and ubinuclein domain; pfam08729"
                     /db_xref="CDD:462581"
     Region          353..573
                     /region_name="UBN_AB"
                     /note="Ubinuclein conserved middle domain; pfam14075"
                     /db_xref="CDD:464081"
     Region          <788..995
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     CDS             1..1015
                     /gene="UBN1"
                     /coded_by="XM_061152777.1:190..3237"
                     /db_xref="GeneID:133063419"
ORIGIN      
        1 msephrvqft slpgslnpaf lkksrkeevg gaeqhqdsep aaaavritlt lfepdhkrcp
       61 effypelvkn lrgkvkglqp adkkkdlldp fndeekerhk vealarkfee kyggkkrrkd
      121 riqdlidmgy gydesdsfid nseaydelvp aslttkyggf yinsgtlqfr qaseseddfi
      181 kekkkkspkk rklkeggeki kkkkkddtyd kekkskkskf skagftalna skekkkkkys
      241 aalsvkemlk kfqkekeaqr krdeehkpia vssaeaqglr elegasdpll slfgsasdnd
      301 llqaatamds ltdldleqll sespegspfh dmddesdslg vgldqefrqp sslpeglpap
      361 lekrvkelaq aaraaegesr qkfftqding illdieaqtr elssqtrsgv yaylasflpc
      421 skdtlvkrar klhlceqqgg rlkeplqklk eaigrampeq makyqdecqa htqakvakml
      481 eeekdkeqre rvcsdeeede ekggrrimgp rkkfqwsdei rellcqvvki klesfdleks
      541 kaqswedyvk afldaevkpl wpkgwmqart lfkesrrghg hltsvlakkk vmasskmkvk
      601 essakpdkkv sissgqmgsp lalpsehlgg glgmgaasre lssqasgsla hpapinleds
      661 ldgdlvhnsa ssleamskel avlnsraggs sefplpapvk vpaekvagvl cpeekrnfpk
      721 pspssappps sslqsplnfl aeqalalgqs sqekkaessg ykelscqaal gkgppegqql
      781 kakhhglprt shappagttm pspqvkvfha gsqpqksftp papfinklqg pkpgspqchr
      841 sllqlvktat ksqsfhastp assggtpass ssshktpasc saavshpakp hsasssgpty
      901 ktspflgsas khgvsscsps sggtpvqspa sgnllpaaqp pstgqsagrp ipgpavkkpp
      961 vpqkltlvap pggpngdssg gtqgvakllt sslkpsavss vtsstslper vglcc
//
LOCUS       XP_061008761             553 aa            linear   MAM 02-DEC-2023
DEFINITION  cytokine-like nuclear factor N-PAC isoform X1 [Dama dama].
ACCESSION   XP_061008761
VERSION     XP_061008761.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152778.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..553
                     /product="cytokine-like nuclear factor N-PAC isoform X1"
                     /calculated_mol_wt=60426
     Region          6..90
                     /region_name="PWWP_GLYR1"
                     /note="PWWP domain found in glyoxylate reductase 1 (GLYR1)
                     and similar proteins; cd05836"
                     /db_xref="CDD:438961"
     Site            order(19,22,46)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438961"
     Site            20..23
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438961"
     Region          268..551
                     /region_name="MmsB"
                     /note="3-hydroxyisobutyrate dehydrogenase or related
                     beta-hydroxyacid dehydrogenase [Lipid transport and
                     metabolism]; COG2084"
                     /db_xref="CDD:441687"
     CDS             1..553
                     /gene="GLYR1"
                     /coded_by="XM_061152778.1:83..1744"
                     /db_xref="GeneID:133063420"
ORIGIN      
        1 maavslrlgd lvwgklgryp pwpgkivnpp kdlkkprgkk cffvkffgte dhawikveql
       61 kpyhahkeem ikinkgkrfq qavdaveefl rrakgkdqts shssaddknr rnsseersrp
      121 isgdekrkls lsegkvkknm gegkkrvpsg ssergskspl kraqeqsprk rgrppkdekd
      181 lsipesstvk gmmagpmatf kwqpnvsepv kdadphfhhf llsqtekpav cyqaitkklk
      241 iceeetgsts iqaadstavn gsvtptdkki gflglglmgs givsnllkmg htvtvwnrta
      301 ekcdlfiqeg arlgrtpaev vstcditfac vsdpkaakdl vlgpsgvlqg irpgkcyvdm
      361 stvdadtvte laqvivsrgg rfleapvsgn qqlsndgmlv ilaagdrgly edcsscfqam
      421 gktsfflgev gnaakmmliv nmvqgsfmat iaegltlaqv tgqsqqtlld ilnqgqlasi
      481 fldqkcqnil qgnfkpdfyl kyiqkdlrla ialgdavnhp tpmaaaanev ykrakaldqs
      541 dndmsavyra yih
//
LOCUS       XP_061008762             547 aa            linear   MAM 02-DEC-2023
DEFINITION  cytokine-like nuclear factor N-PAC isoform X2 [Dama dama].
ACCESSION   XP_061008762
VERSION     XP_061008762.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152779.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..547
                     /product="cytokine-like nuclear factor N-PAC isoform X2"
                     /calculated_mol_wt=59706
     Region          6..90
                     /region_name="PWWP_GLYR1"
                     /note="PWWP domain found in glyoxylate reductase 1 (GLYR1)
                     and similar proteins; cd05836"
                     /db_xref="CDD:438961"
     Site            order(19,22,46)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438961"
     Site            20..23
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438961"
     Region          268..545
                     /region_name="MmsB"
                     /note="3-hydroxyisobutyrate dehydrogenase or related
                     beta-hydroxyacid dehydrogenase [Lipid transport and
                     metabolism]; COG2084"
                     /db_xref="CDD:441687"
     CDS             1..547
                     /gene="GLYR1"
                     /coded_by="XM_061152779.1:83..1726"
                     /db_xref="GeneID:133063420"
ORIGIN      
        1 maavslrlgd lvwgklgryp pwpgkivnpp kdlkkprgkk cffvkffgte dhawikveql
       61 kpyhahkeem ikinkgkrfq qavdaveefl rrakgkdqts shssaddknr rnsseersrp
      121 isgdekrkls lsegkvkknm gegkkrvpsg ssergskspl kraqeqsprk rgrppkdekd
      181 lsipesstvk gmmagpmatf kwqpnvsepv kdadphfhhf llsqtekpav cyqaitkklk
      241 iceeetgsts iqaadstavn gsvtptdkki gflglglmgs givsnllkmg htvtvwnrta
      301 ekegarlgrt paevvstcdi tfacvsdpka akdlvlgpsg vlqgirpgkc yvdmstvdad
      361 tvtelaqviv srggrfleap vsgnqqlsnd gmlvilaagd rglyedcssc fqamgktsff
      421 lgevgnaakm mlivnmvqgs fmatiaeglt laqvtgqsqq tlldilnqgq lasifldqkc
      481 qnilqgnfkp dfylkyiqkd lrlaialgda vnhptpmaaa anevykraka ldqsdndmsa
      541 vyrayih
//
LOCUS       XP_061008763             536 aa            linear   MAM 02-DEC-2023
DEFINITION  cytokine-like nuclear factor N-PAC isoform X3 [Dama dama].
ACCESSION   XP_061008763
VERSION     XP_061008763.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152780.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..536
                     /product="cytokine-like nuclear factor N-PAC isoform X3"
                     /calculated_mol_wt=58506
     Region          6..90
                     /region_name="PWWP_GLYR1"
                     /note="PWWP domain found in glyoxylate reductase 1 (GLYR1)
                     and similar proteins; cd05836"
                     /db_xref="CDD:438961"
     Site            order(19,22,46)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438961"
     Site            20..23
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438961"
     Region          251..534
                     /region_name="MmsB"
                     /note="3-hydroxyisobutyrate dehydrogenase or related
                     beta-hydroxyacid dehydrogenase [Lipid transport and
                     metabolism]; COG2084"
                     /db_xref="CDD:441687"
     CDS             1..536
                     /gene="GLYR1"
                     /coded_by="XM_061152780.1:83..1693"
                     /db_xref="GeneID:133063420"
ORIGIN      
        1 maavslrlgd lvwgklgryp pwpgkivnpp kdlkkprgkk cffvkffgte dhawikveql
       61 kpyhahkeem ikinkgkrfq qavdaveefl rrakgkdqts shssaddknr rnsseersrp
      121 isgdekrkls lsegkvkknm gegkkrvpsg ssergskspl kraqeqsprk rgrppkdekd
      181 lsipesstvk gmmagpmatf kwqpnvsepv kdadphfhhf llsqteketg stsiqaadst
      241 avngsvtptd kkigflglgl mgsgivsnll kmghtvtvwn rtaekcdlfi qegarlgrtp
      301 aevvstcdit facvsdpkaa kdlvlgpsgv lqgirpgkcy vdmstvdadt vtelaqvivs
      361 rggrfleapv sgnqqlsndg mlvilaagdr glyedcsscf qamgktsffl gevgnaakmm
      421 livnmvqgsf matiaegltl aqvtgqsqqt lldilnqgql asifldqkcq nilqgnfkpd
      481 fylkyiqkdl rlaialgdav nhptpmaaaa nevykrakal dqsdndmsav yrayih
//
LOCUS       XP_061008764             472 aa            linear   MAM 02-DEC-2023
DEFINITION  cytokine-like nuclear factor N-PAC isoform X4 [Dama dama].
ACCESSION   XP_061008764
VERSION     XP_061008764.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152781.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..472
                     /product="cytokine-like nuclear factor N-PAC isoform X4"
                     /calculated_mol_wt=51412
     Region          6..90
                     /region_name="PWWP_GLYR1"
                     /note="PWWP domain found in glyoxylate reductase 1 (GLYR1)
                     and similar proteins; cd05836"
                     /db_xref="CDD:438961"
     Site            order(19,22,46)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438961"
     Site            20..23
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438961"
     Region          <129..>221
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Region          187..470
                     /region_name="MmsB"
                     /note="3-hydroxyisobutyrate dehydrogenase or related
                     beta-hydroxyacid dehydrogenase [Lipid transport and
                     metabolism]; COG2084"
                     /db_xref="CDD:441687"
     CDS             1..472
                     /gene="GLYR1"
                     /coded_by="XM_061152781.1:83..1501"
                     /db_xref="GeneID:133063420"
ORIGIN      
        1 maavslrlgd lvwgklgryp pwpgkivnpp kdlkkprgkk cffvkffgte dhawikveql
       61 kpyhahkeem ikinkgkrfq qavdaveefl rrakgkdqdl sipesstvkg mmagpmatfk
      121 wqpnvsepvk dadphfhhfl lsqtekpavc yqaitkklki ceeetgstsi qaadstavng
      181 svtptdkkig flglglmgsg ivsnllkmgh tvtvwnrtae kcdlfiqega rlgrtpaevv
      241 stcditfacv sdpkaakdlv lgpsgvlqgi rpgkcyvdms tvdadtvtel aqvivsrggr
      301 fleapvsgnq qlsndgmlvi laagdrglye dcsscfqamg ktsfflgevg naakmmlivn
      361 mvqgsfmati aegltlaqvt gqsqqtlldi lnqgqlasif ldqkcqnilq gnfkpdfylk
      421 yiqkdlrlai algdavnhpt pmaaaanevy krakaldqsd ndmsavyray ih
//
LOCUS       XP_061008766             466 aa            linear   MAM 02-DEC-2023
DEFINITION  cytokine-like nuclear factor N-PAC isoform X5 [Dama dama].
ACCESSION   XP_061008766
VERSION     XP_061008766.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152783.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..466
                     /product="cytokine-like nuclear factor N-PAC isoform X5"
                     /calculated_mol_wt=50692
     Region          6..90
                     /region_name="PWWP_GLYR1"
                     /note="PWWP domain found in glyoxylate reductase 1 (GLYR1)
                     and similar proteins; cd05836"
                     /db_xref="CDD:438961"
     Site            order(19,22,46)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438961"
     Site            20..23
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438961"
     Region          187..464
                     /region_name="MmsB"
                     /note="3-hydroxyisobutyrate dehydrogenase or related
                     beta-hydroxyacid dehydrogenase [Lipid transport and
                     metabolism]; COG2084"
                     /db_xref="CDD:441687"
     CDS             1..466
                     /gene="GLYR1"
                     /coded_by="XM_061152783.1:83..1483"
                     /db_xref="GeneID:133063420"
ORIGIN      
        1 maavslrlgd lvwgklgryp pwpgkivnpp kdlkkprgkk cffvkffgte dhawikveql
       61 kpyhahkeem ikinkgkrfq qavdaveefl rrakgkdqdl sipesstvkg mmagpmatfk
      121 wqpnvsepvk dadphfhhfl lsqtekpavc yqaitkklki ceeetgstsi qaadstavng
      181 svtptdkkig flglglmgsg ivsnllkmgh tvtvwnrtae kegarlgrtp aevvstcdit
      241 facvsdpkaa kdlvlgpsgv lqgirpgkcy vdmstvdadt vtelaqvivs rggrfleapv
      301 sgnqqlsndg mlvilaagdr glyedcsscf qamgktsffl gevgnaakmm livnmvqgsf
      361 matiaegltl aqvtgqsqqt lldilnqgql asifldqkcq nilqgnfkpd fylkyiqkdl
      421 rlaialgdav nhptpmaaaa nevykrakal dqsdndmsav yrayih
//
LOCUS       XP_061008767             695 aa            linear   MAM 02-DEC-2023
DEFINITION  SEC14-like protein 5 [Dama dama].
ACCESSION   XP_061008767
VERSION     XP_061008767.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152784.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..695
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..695
                     /product="SEC14-like protein 5"
                     /calculated_mol_wt=78697
     Region          17..173
                     /region_name="PRELI"
                     /note="PRELI-like family; pfam04707"
                     /db_xref="CDD:398400"
     Region          243..288
                     /region_name="CRAL_TRIO_N"
                     /note="CRAL/TRIO, N-terminal domain; smart01100"
                     /db_xref="CDD:215024"
     Region          314..476
                     /region_name="CRAL_TRIO"
                     /note="CRAL/TRIO domain; pfam00650"
                     /db_xref="CDD:459890"
     CDS             1..695
                     /gene="SEC14L5"
                     /coded_by="XM_061152784.1:322..2409"
                     /db_xref="GeneID:133063421"
ORIGIN      
        1 mvqkyqspvr vykhpfelvm vayekrfptc pqipvflgse vlresrsadg avhvverscr
       61 lrveaprllr kiagvehvvf vqrnvlnrke rtllieahne tfanrvvvke ncsyrvhpen
      121 edwtcfeqsa sldirsffgf esalekiamr qytanvkrgk eviehylnel isqgtshipr
      181 wtpalareed alsqagqrdp sslevcgpss aqdpapesvs tdgdkldvdy ierclghltp
      241 mqesclvqlr rwlqethkgk ipkdehilrf lrardfhldr aremlcqsls wrerhqvdll
      301 letwrppall eefyaggwhy hdidgrplyi lrlghmdtkg lmkavgeevl lkhilsvnee
      361 gqkrcegntk qfgrpisswt clvdleglsl rhlwrpgvka llrmievveg nypetlgrll
      421 ivraprvfpv lwtlispfin entrqkfliy sgsnyqgpgg lvdyldkdvi pdflggeclc
      481 nvpegglvpk slylmeedqe hedqlrqwre tyhsasvlrg aphevaveil eresvitwdf
      541 dilrgdvvfs lyhakqaltp gpqepgarag gqltdrgwal gadfscmeap licregesiq
      601 gshvtrwpgv yllqwrmhsp pahtacslpg vedvltavhs pgprckllyy yevlasedfr
      661 gsmsslesca srfsqlsaat ssssapshss slasr
//
LOCUS       XP_061008768             569 aa            linear   MAM 02-DEC-2023
DEFINITION  N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase
            [Dama dama].
ACCESSION   XP_061008768
VERSION     XP_061008768.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152785.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..569
                     /product="N-acetylglucosamine-1-phosphodiester
                     alpha-N-acetylglucosaminidase"
                     /calculated_mol_wt=61278
     Region          130..325
                     /region_name="NAGPA"
                     /note="Phosphodiester glycosidase; pfam09992"
                     /db_xref="CDD:430971"
     Region          406..451
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(406,408,414,421,423,432)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     CDS             1..569
                     /gene="NAGPA"
                     /coded_by="XM_061152785.1:69..1778"
                     /db_xref="GeneID:133063422"
ORIGIN      
        1 massmgrfll ffiglrgcll easgdfgsga srdddvllpy srararlprd ctrvhagrle
       61 heswppaapt asahrpsvrt fvsyfadrav pghltrapep lrtfsvlepg gpggcesrrr
      121 atveetarpa gctvaqnggf frmetgeclg nvvsggrrvs sagglqnaqf girrdgtlvt
      181 gylseeevld tenpfvqlls gvvwlirsgs iyinesqaae cedtqetgsf srfvnvisar
      241 tavghdrkgq lvllhvdgqt eqrginlwem aefllkqdvv nainldgggs atfvlngtla
      301 sypsdhcqdn mwrcprrvst vvcvheprcq ppdcsghgtc vegrcqctgr fwrgaacdel
      361 dcgpancsqh rlctetgcrc eagwtgsncs eactsgffge dcaqkcqchn gatcdpvqgt
      421 cacppgftgd tcvqecplgw ygpgcqspck cehqcpcdpq tgncsvnwsp tlsslfsrvk
      481 ecfpppevtv ragelslftr ttwlaitlal afllllstva nvslflgsra arsrhldgay
      541 vyhplqevng eppaaekeql gdscnpfkd
//
LOCUS       XP_061008769             465 aa            linear   MAM 02-DEC-2023
DEFINITION  chitobiosyldiphosphodolichol beta-mannosyltransferase isoform X1
            [Dama dama].
ACCESSION   XP_061008769
VERSION     XP_061008769.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152786.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..465
                     /product="chitobiosyldiphosphodolichol
                     beta-mannosyltransferase isoform X1"
                     /calculated_mol_wt=51967
     Region          31..462
                     /region_name="GT33_ALG1-like"
                     /note="chitobiosyldiphosphodolichol
                     beta-mannosyltransferase and similar proteins; cd03816"
                     /db_xref="CDD:340843"
     CDS             1..465
                     /gene="ALG1"
                     /coded_by="XM_061152786.1:20..1417"
                     /db_xref="GeneID:133063423"
ORIGIN      
        1 maasyvalla lsvflpllll lvawkhwrwe raarhvivvv lgdlgrsprm qyhalslaks
       61 gfsvtllgfc nskphdellq sdriqivslt dlqrlavgph ilqygvkvvf qavhllwklm
      121 cvepaayifl qnppglpaia vcwfagclcg sklvvdwhny gysimglvhg pshplvllak
      181 wyeklcgrls hlnlcvtnam qedlaenwgi kavtvydkpa sffketpldl qhqlfmklsr
      241 typvfrarse ssdpgtersa fteqdalsga vthlcgrpal lvsstswted edfsillaal
      301 ekfeqlidsg eslpslvcvi tgkgplkdyy srlihqkrfq hiqvctpwle aedyplllgs
      361 adlgvclhrs ssgldlpmkv vdmfgcclpv cavnfqclhe lvkhgdnglv fedseelaaq
      421 lqtlfsrfpd pagklhqfre slreseqlrw deswertvlp lisat
//
LOCUS       XP_061008770             465 aa            linear   MAM 02-DEC-2023
DEFINITION  chitobiosyldiphosphodolichol beta-mannosyltransferase isoform X2
            [Dama dama].
ACCESSION   XP_061008770
VERSION     XP_061008770.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152787.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..465
                     /product="chitobiosyldiphosphodolichol
                     beta-mannosyltransferase isoform X2"
                     /calculated_mol_wt=51293
     Region          31..426
                     /region_name="GT33_ALG1-like"
                     /note="chitobiosyldiphosphodolichol
                     beta-mannosyltransferase and similar proteins; cd03816"
                     /db_xref="CDD:340843"
     CDS             1..465
                     /gene="ALG1"
                     /coded_by="XM_061152787.1:20..1417"
                     /db_xref="GeneID:133063423"
ORIGIN      
        1 maasyvalla lsvflpllll lvawkhwrwe raarhvivvv lgdlgrsprm qyhalslaks
       61 gfsvtllgfc nskphdellq sdriqivslt dlqrlavgph ilqygvkvvf qavhllwklm
      121 cvepaayifl qnppglpaia vcwfagclcg sklvvdwhny gysimglvhg pshplvllak
      181 wyeklcgrls hlnlcvtnam qedlaenwgi kavtvydkpa sffketpldl qhqlfmklsr
      241 typvfrarse ssdpgtersa fteqdalsga vthlcgrpal lvsstswted edfsillaal
      301 ekfeqlidsg eslpslvcvi tgkgplkdyy srlihqkrfq hiqvctpwle aedyplllgs
      361 adlgvclhrs ssgldlpmkv vdmfgcclpv cavnfqclhe lvkhgdnglv fedseelaaq
      421 lqvalsvcct pglagfdtfl evsrscwqta pvpreppgvr aaplg
//
LOCUS       XP_061008771             340 aa            linear   MAM 02-DEC-2023
DEFINITION  protein-lysine N-methyltransferase EEF2KMT [Dama dama].
ACCESSION   XP_061008771
VERSION     XP_061008771.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152788.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..340
                     /product="protein-lysine N-methyltransferase EEF2KMT"
                     /calculated_mol_wt=37473
     Region          6..99
                     /region_name="FAM86"
                     /note="Family of unknown function; pfam14904"
                     /db_xref="CDD:464362"
     Region          135..296
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     CDS             1..340
                     /gene="EEF2KMT"
                     /coded_by="XM_061152788.1:15..1037"
                     /db_xref="GeneID:133063424"
ORIGIN      
        1 mapeeradaa rllrgferrf laaralrsfp wqsleeklrd ssgsellldi lqktvkhplc
       61 vkhppsvkyv rsflselirk heaahtepsd elyqalaevl taeepthchr syllpsgdsv
      121 tlcestaivs hgttglitwn aalylaewav enpavfahrt alelgsgagl tglaickacq
      181 psayvfsdch srvleqlrgn vllngfslap gtdaraqhpg prtpkaerpr vtvaqldwdt
      241 vtapqlaafq pdvvlaadvl ycpetvlslv gvlrklsacr kdqrapdayi aftirnpetc
      301 qlfttelgra gipweevphh dqklfpyeeh semailkltl
//
LOCUS       XP_061008773             479 aa            linear   MAM 02-DEC-2023
DEFINITION  ectonucleotide pyrophosphatase/phosphodiesterase family member
            7-like [Dama dama].
ACCESSION   XP_061008773
VERSION     XP_061008773.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152790.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..479
                     /product="ectonucleotide pyrophosphatase/phosphodiesterase
                     family member 7-like"
                     /calculated_mol_wt=54366
     Region          30..395
                     /region_name="Enpp"
                     /note="Ectonucleotide pyrophosphatase/phosphodiesterase,
                     also called autotaxin; cd16018"
                     /db_xref="CDD:293742"
     Site            order(38,73..74,95,198,202,245..246,352)
                     /site_type="active"
                     /db_xref="CDD:293742"
     Site            order(38,73..74,95,198,202,246,352)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:293742"
     Site            377..379
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:293742"
     CDS             1..479
                     /gene="LOC133063426"
                     /coded_by="XM_061152790.1:50..1489"
                     /db_xref="GeneID:133063426"
ORIGIN      
        1 mtgpralmll lpvllgwasg hpvpgtksfr klllisfdgf rwdydqdvdt pnmdrlaqeg
       61 vkakyltppf vtmtspshft tisgrwiedh gvihnmmfnt etlskysfkt tqnktewwdn
      121 gvlplwitaq rqgrktasfh ypgggakyqg eavqrslves ythpngnete wrqnidivmn
      181 wftkedfdfv tlyygepdsv ghlygpdtek rramiqqidr tigylleaig shsltehlnv
      241 iitsdhgmtt mkkkpnitei llsnyisfkd lvqfdivdyg gfgmllpklg qeeavyqalk
      301 nahphlnvyk keefperfhf akhervlpiv myadsgysis grfilyfnkg dhgfdnvymd
      361 mktifrafgp dfkknhlaep fdsihiyplm ckllgvtpep hngslavtqe mlvdtydqht
      421 gaemkrasal qntaigltvv tgvlvvlfva gvtftvfcrk ktqradqnst skpvhltel
//
LOCUS       XP_061008774             372 aa            linear   MAM 02-DEC-2023
DEFINITION  methyltransferase-like protein 22 isoform X1 [Dama dama].
ACCESSION   XP_061008774
VERSION     XP_061008774.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152791.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..372
                     /product="methyltransferase-like protein 22 isoform X1"
                     /calculated_mol_wt=40751
     Region          <164..>312
                     /region_name="Nnt1"
                     /note="Protein N-terminal and lysine N-methylase,
                     NNT1/EFM7 family [Posttranslational modification, protein
                     turnover, chaperones]; COG3897"
                     /db_xref="CDD:443104"
     CDS             1..372
                     /gene="METTL22"
                     /coded_by="XM_061152791.1:275..1393"
                     /db_xref="GeneID:133063427"
ORIGIN      
        1 mdeitfrsdt vlsdvhlytp nqrrlmvrln gmgqpvflsq fkllwdrdsq tdsgakggnh
       61 tegtppagtv cshvgaslqa gadtttpegl aaqldedgdl dvvrrpraas aseppgpprd
      121 kvhpviltqe eddvlgdeap esspynviki ehtmatpled vgkqvwrgal lladyilfqr
      181 dlfqgrtvle lgagtglasi iaatvaqtvy ctdvgadlla mcqrnialns hllasgggvv
      241 kvkeldwlrd nlctdpeapf swseedishl ysnttillaa evfydddltd avfktlsrla
      301 hklknactai lsvekrlnft lrhldvtcea ydhfrawlrr leglaggrlr favepvdasf
      361 pqllvyeriq ql
//
LOCUS       XP_061008775             452 aa            linear   MAM 02-DEC-2023
DEFINITION  methyltransferase-like protein 22 isoform X2 [Dama dama].
ACCESSION   XP_061008775
VERSION     XP_061008775.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152792.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..452
                     /product="methyltransferase-like protein 22 isoform X2"
                     /calculated_mol_wt=49348
     Region          <164..>312
                     /region_name="Nnt1"
                     /note="Protein N-terminal and lysine N-methylase,
                     NNT1/EFM7 family [Posttranslational modification, protein
                     turnover, chaperones]; COG3897"
                     /db_xref="CDD:443104"
     CDS             1..452
                     /gene="METTL22"
                     /coded_by="XM_061152792.1:180..1538"
                     /db_xref="GeneID:133063427"
ORIGIN      
        1 mdeitfrsdt vlsdvhlytp nqrrlmvrln gmgqpvflsq fkllwdrdsq tdsgakggnh
       61 tegtppagtv cshvgaslqa gadtttpegl aaqldedgdl dvvrrpraas aseppgpprd
      121 kvhpviltqe eddvlgdeap esspynviki ehtmatpled vgkqvwrgal lladyilfqr
      181 dlfqgrtvle lgagtglasi iaatvaqtvy ctdvgadlla mcqrnialns hllasgggvv
      241 kvkeldwlrd nlctdpeapf swseedishl ysnttillaa evfydddltd avfktlsrla
      301 hklknactai lsvekrlnft lrhldvtcea ydhfrawlrr leglaggrlr favepvdasf
      361 pqllvyeriq qlqaqrwacc sqkqelcdll pssslrprgs lslsdpcwds arspsteepr
      421 avrgaacpps sfhaaqcspl vgaslwpiyt pl
//
LOCUS       XP_061008776             397 aa            linear   MAM 02-DEC-2023
DEFINITION  methyltransferase-like protein 22 isoform X3 [Dama dama].
ACCESSION   XP_061008776
VERSION     XP_061008776.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152793.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..397
                     /product="methyltransferase-like protein 22 isoform X3"
                     /calculated_mol_wt=43580
     Region          <164..>312
                     /region_name="Nnt1"
                     /note="Protein N-terminal and lysine N-methylase,
                     NNT1/EFM7 family [Posttranslational modification, protein
                     turnover, chaperones]; COG3897"
                     /db_xref="CDD:443104"
     CDS             1..397
                     /gene="METTL22"
                     /coded_by="XM_061152793.1:180..1373"
                     /db_xref="GeneID:133063427"
ORIGIN      
        1 mdeitfrsdt vlsdvhlytp nqrrlmvrln gmgqpvflsq fkllwdrdsq tdsgakggnh
       61 tegtppagtv cshvgaslqa gadtttpegl aaqldedgdl dvvrrpraas aseppgpprd
      121 kvhpviltqe eddvlgdeap esspynviki ehtmatpled vgkqvwrgal lladyilfqr
      181 dlfqgrtvle lgagtglasi iaatvaqtvy ctdvgadlla mcqrnialns hllasgggvv
      241 kvkeldwlrd nlctdpeapf swseedishl ysnttillaa evfydddltd avfktlsrla
      301 hklknactai lsvekrlnft lrhldvtcea ydhfrawlrr leglaggrlr favepvdasf
      361 pqllvyeriq qlelwkifve pvtepivsvd tasrpfs
//
LOCUS       XP_061008777             500 aa            linear   MAM 02-DEC-2023
DEFINITION  4-aminobutyrate aminotransferase, mitochondrial [Dama dama].
ACCESSION   XP_061008777
VERSION     XP_061008777.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152794.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..500
                     /product="4-aminobutyrate aminotransferase, mitochondrial"
                     /calculated_mol_wt=56414
     Region          34..496
                     /region_name="GABAtrns_euk"
                     /note="4-aminobutyrate aminotransferase, eukaryotic type;
                     TIGR00699"
                     /db_xref="CDD:129782"
     Site            order(163..165,217..218,220,293,326,328..329,357)
                     /site_type="active"
                     /note="inhibitor-cofactor binding pocket [active]"
                     /db_xref="CDD:99735"
     Site            order(164..165,217..218,293,326,329,357)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]"
                     /db_xref="CDD:99735"
     Site            357
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99735"
     CDS             1..500
                     /gene="ABAT"
                     /coded_by="XM_061152794.1:154..1656"
                     /db_xref="GeneID:133063428"
ORIGIN      
        1 masmllsqrl vcsfqhnyrl lvpgsrhisq aaakvdvefd ydgplmktev pgprsrelmk
       61 qlniiqnaea vhffcnyees rgnylvdvdg nrmldlysqi ssvpigynhp almklvqqpq
      121 nmstfinrpa lgilppenfv eklresllsv apkgmsqlit macgscsnen afktifmwyr
      181 gkergqssfs keeletcmvn qapgcpdysi lsfmgafhgr tmgclatths kaihkidips
      241 fdwpiapfpr lkypleefvk enqqeearcl eevedlivky rkkkrtvagi ivepiqsegg
      301 dnhasddffr klrdisrkhg caflvdevqt gggctgkfwa hehwglddpa dvmtfskkmm
      361 tggffhkeel rpnapyrifn twlgdpsknl llaevinvik redllnnaah agkvlltgll
      421 dlqarfpqli srvrgrgtfc sfdtpdesvr nklisiarnk glmlggcgdk svrfrptlvf
      481 rdhhahlfln ifsdiladfk
//
LOCUS       XP_061008778             500 aa            linear   MAM 02-DEC-2023
DEFINITION  4-aminobutyrate aminotransferase, mitochondrial [Dama dama].
ACCESSION   XP_061008778
VERSION     XP_061008778.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152795.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..500
                     /product="4-aminobutyrate aminotransferase, mitochondrial"
                     /calculated_mol_wt=56414
     Region          34..496
                     /region_name="GABAtrns_euk"
                     /note="4-aminobutyrate aminotransferase, eukaryotic type;
                     TIGR00699"
                     /db_xref="CDD:129782"
     Site            order(163..165,217..218,220,293,326,328..329,357)
                     /site_type="active"
                     /note="inhibitor-cofactor binding pocket [active]"
                     /db_xref="CDD:99735"
     Site            order(164..165,217..218,293,326,329,357)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]"
                     /db_xref="CDD:99735"
     Site            357
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99735"
     CDS             1..500
                     /gene="ABAT"
                     /coded_by="XM_061152795.1:459..1961"
                     /db_xref="GeneID:133063428"
ORIGIN      
        1 masmllsqrl vcsfqhnyrl lvpgsrhisq aaakvdvefd ydgplmktev pgprsrelmk
       61 qlniiqnaea vhffcnyees rgnylvdvdg nrmldlysqi ssvpigynhp almklvqqpq
      121 nmstfinrpa lgilppenfv eklresllsv apkgmsqlit macgscsnen afktifmwyr
      181 gkergqssfs keeletcmvn qapgcpdysi lsfmgafhgr tmgclatths kaihkidips
      241 fdwpiapfpr lkypleefvk enqqeearcl eevedlivky rkkkrtvagi ivepiqsegg
      301 dnhasddffr klrdisrkhg caflvdevqt gggctgkfwa hehwglddpa dvmtfskkmm
      361 tggffhkeel rpnapyrifn twlgdpsknl llaevinvik redllnnaah agkvlltgll
      421 dlqarfpqli srvrgrgtfc sfdtpdesvr nklisiarnk glmlggcgdk svrfrptlvf
      481 rdhhahlfln ifsdiladfk
//
LOCUS       XP_061008779             219 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 186 isoform X1 [Dama dama].
ACCESSION   XP_061008779
VERSION     XP_061008779.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152796.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..219
                     /product="transmembrane protein 186 isoform X1"
                     /calculated_mol_wt=24366
     CDS             1..219
                     /gene="TMEM186"
                     /coded_by="XM_061152796.1:544..1203"
                     /db_xref="GeneID:133063430"
ORIGIN      
        1 mvslspfqaa llravarspg paawgrplhr lccyggqnpr rglgsgtpps kekppgpeae
       61 kfqmvyrfda ikafgylsrl kvtqtaltva alppglycys qglmpfsslc laggvagfal
      121 amlywmshff rrlvgilyvn eagtvlrvah ltfwgrrqdt ycpvadvipm tesrdrpqel
      181 fvriqqysgk qtfyltlryg rvldqdrftq vfgmldalk
//
LOCUS       XP_061008780             212 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 186 isoform X2 [Dama dama].
ACCESSION   XP_061008780
VERSION     XP_061008780.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152797.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..212
                     /product="transmembrane protein 186 isoform X2"
                     /calculated_mol_wt=23607
     CDS             1..212
                     /gene="TMEM186"
                     /coded_by="XM_061152797.1:38..676"
                     /db_xref="GeneID:133063430"
ORIGIN      
        1 maallravar spgpaawgrp lhrlccyggq nprrglgsgt ppskekppgp eaekfqmvyr
       61 fdaikafgyl srlkvtqtal tvaalppgly cysqglmpfs slclaggvag falamlywms
      121 hffrrlvgil yvneagtvlr vahltfwgrr qdtycpvadv ipmtesrdrp qelfvriqqy
      181 sgkqtfyltl rygrvldqdr ftqvfgmlda lk
//
LOCUS       XP_061008782             246 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphomannomutase 2 isoform X1 [Dama dama].
ACCESSION   XP_061008782
VERSION     XP_061008782.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152799.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..246
                     /product="phosphomannomutase 2 isoform X1"
                     /calculated_mol_wt=27926
     Region          8..244
                     /region_name="HAD_PMM"
                     /note="phosphomannomutase, similar to human PMM1 and PMM2,
                     Saccharomyces Sec53p, and Arabidopsis thaliana PMM;
                     cd02585"
                     /db_xref="CDD:319784"
     Site            order(12..16,21,45..47,51,123,128,134,141,176..179,181,
                     189,208..209,216..217)
                     /site_type="active"
                     /db_xref="CDD:319784"
     CDS             1..246
                     /gene="PMM2"
                     /coded_by="XM_061152799.1:120..860"
                     /db_xref="GeneID:133063431"
ORIGIN      
        1 maapgpalcl fdvdgtltap rqkitkdmdc flqklrqkik igvvggsdfe kvqeqlgddv
       61 ikkydyvfpe nglvayrdgk llckqniqgh lgealiqdli nyclsyiski klpkkrgtfi
      121 efrngmlnvs pigrscsqee riefyeldqk ekirqkfved lrkefagkgl tfsiggqisf
      181 dvfpdgwdkr yclghvekdg yktiyffgdk tmpggndhei ftdprtvgyt vtapedtrri
      241 ceelfc
//
LOCUS       XP_061008783             219 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphomannomutase 2 isoform X2 [Dama dama].
ACCESSION   XP_061008783
VERSION     XP_061008783.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152800.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..219
                     /product="phosphomannomutase 2 isoform X2"
                     /calculated_mol_wt=25114
     Region          1..218
                     /region_name="PMM"
                     /note="Eukaryotic phosphomannomutase; pfam03332"
                     /db_xref="CDD:397425"
     CDS             1..219
                     /gene="PMM2"
                     /coded_by="XM_061152800.1:356..1015"
                     /db_xref="GeneID:133063431"
ORIGIN      
        1 mdcflqklrq kikigvvggs dfekvqeqlg ddvikkydyv fpenglvayr dgkllckqni
       61 qghlgealiq dlinyclsyi skiklpkkrg tfiefrngml nvspigrscs qeeriefyel
      121 dqkekirqkf vedlrkefag kgltfsiggq isfdvfpdgw dkryclghve kdgyktiyff
      181 gdktmpggnd heiftdprtv gytvtapedt rriceelfc
//
LOCUS       XP_061008784             147 aa            linear   MAM 02-DEC-2023
DEFINITION  calcium-regulated heat-stable protein 1 [Dama dama].
ACCESSION   XP_061008784
VERSION     XP_061008784.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152801.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..147
                     /product="calcium-regulated heat-stable protein 1"
                     /calculated_mol_wt=15730
     Region          63..128
                     /region_name="CSP_CDS"
                     /note="Cold-Shock Protein (CSP) contains an S1-like
                     cold-shock domain (CSD) that is found in eukaryotes,
                     prokaryotes, and archaea. CSP's include the major
                     cold-shock proteins CspA and CspB in bacteria and the
                     eukaryotic gene regulatory factor Y-box protein; cd04458"
                     /db_xref="CDD:239905"
     Site            order(69,78,89,119)
                     /site_type="DNA binding"
                     /note="DNA-binding site [nucleotide binding]"
                     /db_xref="CDD:239905"
     Site            order(75..81,88..91)
                     /site_type="active"
                     /note="RNA-binding motif [active]"
                     /db_xref="CDD:239905"
     CDS             1..147
                     /gene="CARHSP1"
                     /coded_by="XM_061152801.1:99..542"
                     /db_xref="GeneID:133063432"
ORIGIN      
        1 msseppppsq ppthqssagl ldtqqardrs psplrgnvvp splptrrtrt fsatvrasqg
       61 pvykgvckcf crskghgfit padggpdifl hisdvegeyv pmegdevtyk mcsippknek
      121 lqavevvith lapgtkhetw sghvvss
//
LOCUS       XP_061008785            1104 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin carboxyl-terminal hydrolase 7 isoform X1 [Dama dama].
ACCESSION   XP_061008785
VERSION     XP_061008785.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152802.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1104
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1104
                     /product="ubiquitin carboxyl-terminal hydrolase 7 isoform
                     X1"
                     /calculated_mol_wt=128511
     Region          58..1102
                     /region_name="Peptidase_C19"
                     /note="Peptidase C19 contains ubiquitinyl hydrolases. They
                     are intracellular peptidases that remove ubiquitin
                     molecules from polyubiquinated peptides by cleavage of
                     isopeptide bonds. They hydrolyse bonds involving the
                     carboxyl group of the C-terminal Gly...; cl02553"
                     /db_xref="CDD:470612"
     Site            order(220,225,466,484)
                     /site_type="active"
                     /db_xref="CDD:239124"
     CDS             1..1104
                     /gene="USP7"
                     /coded_by="XM_061152802.1:71..3385"
                     /db_xref="GeneID:133063433"
ORIGIN      
        1 mnhqqqqqqq qqkageqqls epedmemeag dtddppritq npvingnvam sdghsnteed
       61 meddtswrse atfqftverf srlsesvlsp pcfvrnlpwk imvmprfypd rphqksvgff
      121 lqcnaesdst swschaqavl kiinyrddek sfsrrishlf fhkendwgfs nfmawsevtd
      181 pekgfidddk vtfevfvqad aphgvawdsk khtgyvglkn qgatcymnsl lqtlfftnql
      241 rkavymmpte gddssksvpl alqrvfyelq hsdkpvgtkk ltksfgwetl dsfmqhdvqe
      301 lcrvlldnve nkmkgtcveg tipklfrgkm vsyiqckevd yrsdrredyy diqlsikgkk
      361 nifesfvdyv aveqldgdnk ydagehglqe aekgvkfltl ppvlhlqlmr fmydpqtdqn
      421 ikindrfefp eqlpldeflq ktdpkdpany ilhavlvhsg dnhgghyvvy lnpkgdgkwc
      481 kfdddvvsrc tkeeaiehny gghdddlsvr hctnaymlvy iresklsevl qavtdqdipq
      541 qlverlqeek rieaqkrker qeahlymqvq ivaedqfcgh qgndmydeek vrytvfkvlk
      601 nsslsefvqn lsqtmgfpqd qirlwpmqar sngtkrpaml dneadgsktm ielsdnenpw
      661 tifletvdpe laasgatlpk fdkdhdvmlf lkmydpktrs lnycghiytp isckirdllp
      721 vmcdragfiq dtslilyeev kpnlteriqd ydvsldkald elmdgdiivf qkddpendns
      781 elptakeyfr dlyhrvdvif cdktipndpg fvvtlsnrmn yfqvaktvaq rlntdpmllq
      841 ffksqgyrdg pgnplrhnye gtlrdllqff kprqpkklyy qqlkmkitdf enrrsfkciw
      901 lnsqfreeei tlypdkhgcv rdlleeckka velgekasgk lrlleivsyk iigvhqedel
      961 leclspatsr tfrieeipld qvdidkenem litvahfhke vfgtfgipfl lrihqgehfr
     1021 evmkriqsll diqekefekf kfaivmmgrh qyinedeyev nlkdfepqpg nmshprpwlg
     1081 ldhfnkapkr srytylekai kihn
//
LOCUS       XP_061008786            1003 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin carboxyl-terminal hydrolase 7 isoform X2 [Dama dama].
ACCESSION   XP_061008786
VERSION     XP_061008786.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152803.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1003
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1003
                     /product="ubiquitin carboxyl-terminal hydrolase 7 isoform
                     X2"
                     /calculated_mol_wt=116917
     Region          6..1001
                     /region_name="Peptidase_C19"
                     /note="Peptidase C19 contains ubiquitinyl hydrolases. They
                     are intracellular peptidases that remove ubiquitin
                     molecules from polyubiquinated peptides by cleavage of
                     isopeptide bonds. They hydrolyse bonds involving the
                     carboxyl group of the C-terminal Gly...; cl02553"
                     /db_xref="CDD:470612"
     Site            order(119,124,365,383)
                     /site_type="active"
                     /db_xref="CDD:239124"
     CDS             1..1003
                     /gene="USP7"
                     /coded_by="XM_061152803.1:394..3405"
                     /db_xref="GeneID:133063433"
ORIGIN      
        1 mvmprfypdr phqksvgffl qcnaesdsts wschaqavlk iinyrddeks fsrrishlff
       61 hkendwgfsn fmawsevtdp ekgfidddkv tfevfvqada phgvawdskk htgyvglknq
      121 gatcymnsll qtlfftnqlr kavymmpteg ddssksvpla lqrvfyelqh sdkpvgtkkl
      181 tksfgwetld sfmqhdvqel crvlldnven kmkgtcvegt ipklfrgkmv syiqckevdy
      241 rsdrredyyd iqlsikgkkn ifesfvdyva veqldgdnky dagehglqea ekgvkfltlp
      301 pvlhlqlmrf mydpqtdqni kindrfefpe qlpldeflqk tdpkdpanyi lhavlvhsgd
      361 nhgghyvvyl npkgdgkwck fdddvvsrct keeaiehnyg ghdddlsvrh ctnaymlvyi
      421 resklsevlq avtdqdipqq lverlqeekr ieaqkrkerq eahlymqvqi vaedqfcghq
      481 gndmydeekv rytvfkvlkn sslsefvqnl sqtmgfpqdq irlwpmqars ngtkrpamld
      541 neadgsktmi elsdnenpwt ifletvdpel aasgatlpkf dkdhdvmlfl kmydpktrsl
      601 nycghiytpi sckirdllpv mcdragfiqd tslilyeevk pnlteriqdy dvsldkalde
      661 lmdgdiivfq kddpendnse lptakeyfrd lyhrvdvifc dktipndpgf vvtlsnrmny
      721 fqvaktvaqr lntdpmllqf fksqgyrdgp gnplrhnyeg tlrdllqffk prqpkklyyq
      781 qlkmkitdfe nrrsfkciwl nsqfreeeit lypdkhgcvr dlleeckkav elgekasgkl
      841 rlleivsyki igvhqedell eclspatsrt frieeipldq vdidkeneml itvahfhkev
      901 fgtfgipfll rihqgehfre vmkriqslld iqekefekfk faivmmgrhq yinedeyevn
      961 lkdfepqpgn mshprpwlgl dhfnkapkrs rytylekaik ihn
//
LOCUS       XP_061008787             275 aa            linear   MAM 02-DEC-2023
DEFINITION  HUWE1-associated protein modifying stress responses 1 [Dama dama].
ACCESSION   XP_061008787
VERSION     XP_061008787.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152804.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..275
                     /product="HUWE1-associated protein modifying stress
                     responses 1"
                     /calculated_mol_wt=30794
     Region          25..273
                     /region_name="DUF4588"
                     /note="Domain of unknown function (DUF4588); pfam15251"
                     /db_xref="CDD:464591"
     CDS             1..275
                     /gene="HAPSTR1"
                     /coded_by="XM_061152804.1:18..845"
                     /db_xref="GeneID:133063434"
ORIGIN      
        1 meerkeegea eiqehgpehw fskwerqcla eaeqdeqlpp elqeeaaaaa qpehkqqklw
       61 hlfqnsatav aqlykdrvcq qpglslwvpf qnaatavtnl ykesvdthqr sfdigiqigy
      121 qrrnkdvlaw vkkrrrtirr edlisflcgk vppprnsrap prltvvspnr atstetsssv
      181 etdlqpfrea ialhglsgam asisvrsstp gspthvssgs nasrrrnglh dvdlntfise
      241 emalhldngg trkrtsaqcg dvitdspthk rnrmi
//
LOCUS       XP_061008788            1464 aa            linear   MAM 02-DEC-2023
DEFINITION  glutamate receptor ionotropic, NMDA 2A isoform X1 [Dama dama].
ACCESSION   XP_061008788
VERSION     XP_061008788.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152805.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1464
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1464
                     /product="glutamate receptor ionotropic, NMDA 2A isoform
                     X1"
                     /calculated_mol_wt=164539
     Region          32..387
                     /region_name="PBP1_iGluR_NMDA_NR2"
                     /note="N-terminal leucine-isoleucine-valine-binding
                     protein (LIVBP)-like domain of the NR2 subunit of NMDA
                     receptor family; cd06378"
                     /db_xref="CDD:380601"
     Site            order(32,78..80,115,136,176,178,193,208..209,310..311)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:380601"
     Site            order(76..81,83..84,119..120,176,180,207,209,310..316,
                     320..322,333)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:380601"
     Region          403..802
                     /region_name="PBP2_iGluR_NMDA_Nr2"
                     /note="The ligand-binding domain of the NR2 subunit of
                     ionotropic NMDA (N-methyl-D-aspartate) glutamate
                     receptors, a member of the type 2 periplasmic binding fold
                     protein superfamily; cd13718"
                     /db_xref="CDD:270436"
     Site            order(511..514,516,518..520,666,688..689,693,731,756..758,
                     761,767,783..786,789)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:270436"
     Site            order(511..513,518,688..690,730..731)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:270436"
     Region          839..1464
                     /region_name="NMDAR2_C"
                     /note="N-methyl D-aspartate receptor 2B3 C-terminus;
                     pfam10565"
                     /db_xref="CDD:463148"
     CDS             1..1464
                     /gene="GRIN2A"
                     /coded_by="XM_061152805.1:76..4470"
                     /db_xref="GeneID:133063435"
ORIGIN      
        1 mgrlgywtll vlpallvwrg paqgaaaekg ppalniavll ghshdvtere lrnlwgpeha
       61 aglpldvnvv allmnrtdpk slithvcdlm sgarihglvf gddtdqeava qmldfissqt
      121 fipilgihgg asmimadkdp tstffqfgas iqqqatvmlk imqdydwhvf slvttifpgy
      181 rdfisfiktt vdnsfvgwdm qnvitldtsf edaktqvqlk kihssvilly cskdeavlil
      241 searslgltg ydffwivpsl vsgntelipk efpsglisvs yddwdyslea rvrdglgilt
      301 taassmldkf syipeakasc ygqtekleap lhtlhqfmvn vtwdgkdlsf teegyqvhpr
      361 lvvivlnkdr ewekvgkwen qtlslrhavw pryksfsdce pddnhlsivt leeapfvive
      421 didpltetcv rntvpcrkfv kinnstnegm nvkkcckgfc idilkklsrt vkftydlylv
      481 tngkhgkkvn nvwngmigev vyhravmavg sltineerse vvdfsvpfve tgisvmvsrs
      541 ngtvspsafl epfsasvwvm mfvmllivsa iavfvfeyfs pvgynrnlak gkaphgpsft
      601 igkaiwllwg lvfnnsvpvq npkgttskim vsvwaffavi flasytanla afmiqeefvd
      661 qvtglsdkkf qrphdysppf rfgtvpngst ernirnnypy mhqymtkfnq kgvedalvsl
      721 ktgkldafiy daavlnykag rdegcklvti gsgyifattg ygialqkgsp wkrqidlall
      781 qfvgdgemee letlwltgic hneknevmss qldidnmagv fymlaaamal slitfiwehl
      841 fywklrfcft gvcsdrpgll fsisrgiysc ihgvhieekk kspdfnltgs qsnmlkllrs
      901 aknisnlsnm nssrmdspkr aadfiqrgsl imdmvsdkgn lvysdnrsfq gkdsifgdnm
      961 nelqtfvanr hkdnlnnyvf qgqhpltlne snpntvevav steskgnsrp rqlwkksmes
     1021 lrqdsltqnp isqrdegpve nrthslkspr ylpeevahsd vsetssraac hrepdnnknh
     1081 kakdnfkrsm askypkdcse aersylktka ssprdkiyti dgekepsfhl dpppfaesia
     1141 lpenvdfpdt yqergesfrk gdstlplnrn alheedvlsn nepyklyskh fslkdkssph
     1201 segsdryrqn sthcrsclsn lptyaghftm rspfkcdacl rmgnlydide dqmlqetgnp
     1261 aaqeevyqqd wapnsalqlq knklrisrqh sydnildkpr evdlsrpsrs islkdrerll
     1321 egnlygslfs vpssklagnk gslfpqglev gkrsksllpd htsenpflhs ygddqrlvig
     1381 rcpsdpykhs lpsqaandgy lrsslrstas ycsrdsrghs dvyisehvmp yaanknnmys
     1441 aprvlnscsn rrvykkmpsi esdv
//
LOCUS       XP_061008789            1262 aa            linear   MAM 02-DEC-2023
DEFINITION  glutamate receptor ionotropic, NMDA 2A isoform X2 [Dama dama].
ACCESSION   XP_061008789
VERSION     XP_061008789.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152806.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1262
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1262
                     /product="glutamate receptor ionotropic, NMDA 2A isoform
                     X2"
                     /calculated_mol_wt=141772
     Region          32..387
                     /region_name="PBP1_iGluR_NMDA_NR2"
                     /note="N-terminal leucine-isoleucine-valine-binding
                     protein (LIVBP)-like domain of the NR2 subunit of NMDA
                     receptor family; cd06378"
                     /db_xref="CDD:380601"
     Site            order(32,78..80,115,136,176,178,193,208..209,310..311)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:380601"
     Site            order(76..81,83..84,119..120,176,180,207,209,310..316,
                     320..322,333)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:380601"
     Region          403..802
                     /region_name="PBP2_iGluR_NMDA_Nr2"
                     /note="The ligand-binding domain of the NR2 subunit of
                     ionotropic NMDA (N-methyl-D-aspartate) glutamate
                     receptors, a member of the type 2 periplasmic binding fold
                     protein superfamily; cd13718"
                     /db_xref="CDD:270436"
     Site            order(511..514,516,518..520,666,688..689,693,731,756..758,
                     761,767,783..786,789)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:270436"
     Site            order(511..513,518,688..690,730..731)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:270436"
     Region          839..>1258
                     /region_name="NMDAR2_C"
                     /note="N-methyl D-aspartate receptor 2B3 C-terminus;
                     pfam10565"
                     /db_xref="CDD:463148"
     CDS             1..1262
                     /gene="GRIN2A"
                     /coded_by="XM_061152806.1:1..3789"
                     /db_xref="GeneID:133063435"
ORIGIN      
        1 mgrlgywtll vlpallvwrg paqgaaaekg ppalniavll ghshdvtere lrnlwgpeha
       61 aglpldvnvv allmnrtdpk slithvcdlm sgarihglvf gddtdqeava qmldfissqt
      121 fipilgihgg asmimadkdp tstffqfgas iqqqatvmlk imqdydwhvf slvttifpgy
      181 rdfisfiktt vdnsfvgwdm qnvitldtsf edaktqvqlk kihssvilly cskdeavlil
      241 searslgltg ydffwivpsl vsgntelipk efpsglisvs yddwdyslea rvrdglgilt
      301 taassmldkf syipeakasc ygqtekleap lhtlhqfmvn vtwdgkdlsf teegyqvhpr
      361 lvvivlnkdr ewekvgkwen qtlslrhavw pryksfsdce pddnhlsivt leeapfvive
      421 didpltetcv rntvpcrkfv kinnstnegm nvkkcckgfc idilkklsrt vkftydlylv
      481 tngkhgkkvn nvwngmigev vyhravmavg sltineerse vvdfsvpfve tgisvmvsrs
      541 ngtvspsafl epfsasvwvm mfvmllivsa iavfvfeyfs pvgynrnlak gkaphgpsft
      601 igkaiwllwg lvfnnsvpvq npkgttskim vsvwaffavi flasytanla afmiqeefvd
      661 qvtglsdkkf qrphdysppf rfgtvpngst ernirnnypy mhqymtkfnq kgvedalvsl
      721 ktgkldafiy daavlnykag rdegcklvti gsgyifattg ygialqkgsp wkrqidlall
      781 qfvgdgemee letlwltgic hneknevmss qldidnmagv fymlaaamal slitfiwehl
      841 fywklrfcft gvcsdrpgll fsisrgiysc ihgvhieekk kspdfnltgs qsnmlkllrs
      901 aknisnlsnm nssrmdspkr aadfiqrgsl imdmvsdkgn lvysdnrsfq gkdsifgdnm
      961 nelqtfvanr hkdnlnnyvf qgqhpltlne snpntvevav steskgnsrp rqlwkksmes
     1021 lrqdsltqnp isqrdegpve nrthslkspr ylpeevahsd vsetssraac hrepdnnknh
     1081 kakdnfkrsm askypkdcse aersylktka ssprdkiyti dgekepsfhl dpppfaesia
     1141 lpenvdfpdt yqergesfrk gdstlplnrn alheedvlsn nepyklyskh fslkdkssph
     1201 segsdryrqn sthcrsclsn lptyaghftm rspfkcdacl rmgnlydide dqmlqetgmt
     1261 na
//
LOCUS       XP_061008790             167 aa            linear   MAM 02-DEC-2023
DEFINITION  epithelial membrane protein 2 [Dama dama].
ACCESSION   XP_061008790
VERSION     XP_061008790.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152807.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..167
                     /product="epithelial membrane protein 2"
                     /calculated_mol_wt=18924
     Region          1..160
                     /region_name="PMP22_Claudin"
                     /note="PMP-22/EMP/MP20/Claudin family; pfam00822"
                     /db_xref="CDD:395662"
     CDS             1..167
                     /gene="EMP2"
                     /coded_by="XM_061152807.1:210..713"
                     /db_xref="GeneID:133063437"
ORIGIN      
        1 mlvllafiii fhitsaallf vatidnawwv geeffadiwr vcvnntncte lndavedfst
       61 vqavqatmil stilcciafl ifvlqlfrlk qgerfvltsi iqlmaclcvm iaasiytdrr
      121 kdihehnrel yaqtsggsfg ysfilawvaf aftfisglmy lilrkrk
//
LOCUS       XP_061008791             320 aa            linear   MAM 02-DEC-2023
DEFINITION  cytosolic Fe-S cluster assembly factor NUBP1 [Dama dama].
ACCESSION   XP_061008791
VERSION     XP_061008791.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152808.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..320
                     /product="cytosolic Fe-S cluster assembly factor NUBP1"
                     /calculated_mol_wt=33979
     Region          53..303
                     /region_name="ParA"
                     /note="NUBPL iron-transfer P-loop NTPase; pfam10609"
                     /db_xref="CDD:431392"
     Site            order(63..70,202,204,229..230,268..270,273..274)
                     /site_type="active"
                     /db_xref="CDD:349757"
     Site            order(63..65,95..96,98,101..102,145..146,176,178,181,208,
                     211,269,271..272,274)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:349757"
     CDS             1..320
                     /gene="NUBP1"
                     /coded_by="XM_061152808.1:55..1017"
                     /db_xref="GeneID:133063438"
ORIGIN      
        1 meevphdcpg adsaqagrga scqgcpnqrl casgagaaad paieeikekm ktvkhkilvl
       61 sgkggvgkst fsahlahgla edentqvall didicgpsip kimglegeqv hqsgsgwspv
      121 flednlgvms vgfllsspdd aviwrgpkkn gmikqflrdv dwgevdyliv dtppgtsdeh
      181 lsvvqylaaa hidgavvitt pqevslqdvr kevsfchkvk lpvigvvenm sgficpkcqk
      241 esqifppttg gaeamcqdlk ipllgkvpld prigkscdkg qsflveapds patvayrsii
      301 qriqefcsqr lpegenlvgs
//
LOCUS       XP_061008793             319 aa            linear   MAM 02-DEC-2023
DEFINITION  Golgi apparatus membrane protein TVP23 homolog A isoform X1 [Dama
            dama].
ACCESSION   XP_061008793
VERSION     XP_061008793.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152810.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..319
                     /product="Golgi apparatus membrane protein TVP23 homolog A
                     isoform X1"
                     /calculated_mol_wt=36450
     Region          72..213
                     /region_name="DUF846"
                     /note="Eukaryotic protein of unknown function (DUF846);
                     pfam05832"
                     /db_xref="CDD:461754"
     CDS             1..319
                     /gene="TVP23A"
                     /coded_by="XM_061152810.1:484..1443"
                     /db_xref="GeneID:133063439"
ORIGIN      
        1 mgkywilrgw ekcwcdedgf essrrvmlsl scalvesglk raenmwvvet tehvwplslg
       61 pwserasgff prhpvatffh lffrvsaiit yvgcdwfsks fvgcfvtvll llsfdfwsvk
      121 nvtgrlmvgl rwwnqidedg kshwifeark vspdtvaate aearvfwlgl ivcpmiwivf
      181 ffsslfslkl kwlalviagi slqaanlygy vlckmggesd iskvtasfls qtvfqtvsys
      241 sltpgplisr hlkvqeacwl wqfmffcisq aasvswgfvf vvkirttkft llaifkctvq
      301 ythiimppql fhpsklcth
//
LOCUS       XP_061008794             255 aa            linear   MAM 02-DEC-2023
DEFINITION  Golgi apparatus membrane protein TVP23 homolog A isoform X2 [Dama
            dama].
ACCESSION   XP_061008794
VERSION     XP_061008794.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152811.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..255
                     /product="Golgi apparatus membrane protein TVP23 homolog A
                     isoform X2"
                     /calculated_mol_wt=28963
     Region          72..213
                     /region_name="DUF846"
                     /note="Eukaryotic protein of unknown function (DUF846);
                     pfam05832"
                     /db_xref="CDD:461754"
     CDS             1..255
                     /gene="TVP23A"
                     /coded_by="XM_061152811.1:484..1251"
                     /db_xref="GeneID:133063439"
ORIGIN      
        1 mgkywilrgw ekcwcdedgf essrrvmlsl scalvesglk raenmwvvet tehvwplslg
       61 pwserasgff prhpvatffh lffrvsaiit yvgcdwfsks fvgcfvtvll llsfdfwsvk
      121 nvtgrlmvgl rwwnqidedg kshwifeark vspdtvaate aearvfwlgl ivcpmiwivf
      181 ffsslfslkl kwlalviagi slqaanlygy vlckmggesd iskvtasfls qtvfqtacps
      241 dfqkpglegl eihkh
//
LOCUS       XP_061008795             213 aa            linear   MAM 02-DEC-2023
DEFINITION  Golgi apparatus membrane protein TVP23 homolog A isoform X3 [Dama
            dama].
ACCESSION   XP_061008795
VERSION     XP_061008795.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152812.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..213
                     /product="Golgi apparatus membrane protein TVP23 homolog A
                     isoform X3"
                     /calculated_mol_wt=24006
     Region          30..171
                     /region_name="DUF846"
                     /note="Eukaryotic protein of unknown function (DUF846);
                     pfam05832"
                     /db_xref="CDD:461754"
     CDS             1..213
                     /gene="TVP23A"
                     /coded_by="XM_061152812.1:49..690"
                     /db_xref="GeneID:133063439"
ORIGIN      
        1 mkqalvddte dvsldfgnee elafrkakir hpvatffhlf frvsaiityv gcdwfsksfv
       61 gcfvtvllll sfdfwsvknv tgrlmvglrw wnqidedgks hwifearkvs pdtvaateae
      121 arvfwlgliv cpmiwivfff sslfslklkw lalviagisl qaanlygyvl ckmggesdis
      181 kvtasflsqt vfqtacpsdf qkpgleglei hkh
//
LOCUS       XP_061008796             193 aa            linear   MAM 02-DEC-2023
DEFINITION  Golgi apparatus membrane protein TVP23 homolog A isoform X4 [Dama
            dama].
ACCESSION   XP_061008796
VERSION     XP_061008796.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152813.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..193
                     /product="Golgi apparatus membrane protein TVP23 homolog A
                     isoform X4"
                     /calculated_mol_wt=21840
     Region          <1..87
                     /region_name="DUF846"
                     /note="Eukaryotic protein of unknown function (DUF846);
                     pfam05832"
                     /db_xref="CDD:461754"
     CDS             1..193
                     /gene="TVP23A"
                     /coded_by="XM_061152813.1:242..823"
                     /db_xref="GeneID:133063439"
ORIGIN      
        1 mvglrwwnqi dedgkshwif earkvspdtv aateaearvf wlglivcpmi wivfffsslf
       61 slklkwlalv iagislqaan lygyvlckmg gesdiskvta sflsqtvfqt vsyssltpgp
      121 lisrhlkvqe acwlwqfmff cisqaasvsw gfvfvvkirt tkftllaifk ctvqythiim
      181 ppqlfhpskl cth
//
LOCUS       XP_061008797            1209 aa            linear   MAM 02-DEC-2023
DEFINITION  MHC class II transactivator isoform X1 [Dama dama].
ACCESSION   XP_061008797
VERSION     XP_061008797.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152814.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1209
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1209
                     /product="MHC class II transactivator isoform X1"
                     /calculated_mol_wt=131627
     Region          <338..483
                     /region_name="PHA02682"
                     /note="ORF080 virion core protein; Provisional"
                     /db_xref="CDD:177464"
     Region          490..661
                     /region_name="NACHT"
                     /note="NACHT domain; pfam05729"
                     /db_xref="CDD:428606"
     Region          868..1193
                     /region_name="LRR_RI"
                     /note="Leucine-rich repeats (LRRs), ribonuclease inhibitor
                     (RI)-like subfamily. LRRs are 20-29 residue sequence
                     motifs present in many proteins that participate in
                     protein-protein interactions and have different functions
                     and cellular locations. LRRs correspond...; cd00116"
                     /db_xref="CDD:238064"
     Site            order(870,872,875,877,892,898,900,903,905,923,926,928,931,
                     933,958,961,963,966,968,984,986,989,991,1010,1013,1015,
                     1018,1020,1036,1039,1041,1044,1047,1065,1068,1070,1076,
                     1078,1096,1099,1101,1104,1106,1125,1128,1130,1133,1135,
                     1153,1156,1158,1161,1163,1183,1186,1188,1191,1193)
                     /site_type="active"
                     /note="Leucine-rich repeats [active]"
                     /db_xref="CDD:238064"
     Site            order(901..902,965,1017,1043,1103,1129,1131,1157,1187)
                     /site_type="other"
                     /note="Substrate binding site [chemical binding]"
                     /db_xref="CDD:238064"
     Region          1065..1095
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1209
                     /gene="CIITA"
                     /coded_by="XM_061152814.1:224..3853"
                     /db_xref="GeneID:133063440"
ORIGIN      
        1 mnhfqtiltq vrmllsshrp sqvqalldnl laeellsrey hyallhesdg ealarkislt
       61 llekgdpdla lfgwiwsglq aptaerdpsy kdpggseqcp tmelgplegs ylellnssad
      121 plqlyhlydr mdltgeeeie lcsepdtdti nceqfsrllc dmegddetre ayaniaeldq
      181 yvfqdtqleg lskdifiehi gleemisesv evleeagqks qkrpfpeelp adlkhrklae
      241 pltmpvvtgt flvgpvsdsl aqpcppppal fntepassqt rlkdpappss sllsclslpa
      301 gsiqiiptlp tlpqglwpis gtgtgvssil iyqgemlpas qtppssdpav qslpkspdrp
      361 gsaspfapsa adlpsmpepa ltsranlted emsptkcpaa drassklpkw pesveqfyqs
      421 lrdkyqaqpa gpegtlveme lvrvrlekss gksqerelat ldwaerqpaq gglaevllaa
      481 rdrrqpretr viavlgkagh gkshwaravs rawargqlpq ydfvfcipch cldrpgtsyr
      541 lqdllsslgp qalpvddevf syivrrpnrv llildafeel eahdgslhsa ggpgsaeprs
      601 lrgllagllq rkllrgctll ltarprgrla qslskadalf evagfsaqqa etyvrhyfes
      661 egtaehqera lallraqpfl lshshsptic ravcqlaeal lqrsgeaqlp stltglyvgl
      721 lgpaardspp galaglarla welgrahqsg lkedcfpsae arawavaqgw lrptpgapet
      781 elafssfllq cflgavwlal sgeikdkelp qylaltprkk rpydnwlegv prflvglvfq
      841 phagclgalg alagpaassl adrkqkvltr ylkrlqpgtl qagrllellh cahealdpgl
      901 wqhvlqglpa rlsflgtrlt ppdthvlgra leaagrdfsl dlrstgvdps glgslvglrc
      961 vagfraalsd tvelweslqe rgeakllrav eekftiepfk aksmkdvedl snlvqiqrtr
     1021 ssseeaagel pavrdlkkle falgpvlgpq vfpklvkile aftslqhldl dslsenkigd
     1081 egvaqlattf pqlkaletln lsqnnitdvg acklaealpa laasllrlsl ynncicdaga
     1141 eslahvlpdm vslrvvdvqy nkftaagaqq laaglrkcpq vktlamwtpt ipfgvqehlq
     1201 qldpriilr
//
LOCUS       XP_061008798            1182 aa            linear   MAM 02-DEC-2023
DEFINITION  MHC class II transactivator isoform X2 [Dama dama].
ACCESSION   XP_061008798
VERSION     XP_061008798.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152815.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1182
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1182
                     /product="MHC class II transactivator isoform X2"
                     /calculated_mol_wt=128579
     Region          <311..456
                     /region_name="PHA02682"
                     /note="ORF080 virion core protein; Provisional"
                     /db_xref="CDD:177464"
     Region          463..634
                     /region_name="NACHT"
                     /note="NACHT domain; pfam05729"
                     /db_xref="CDD:428606"
     Region          841..1166
                     /region_name="LRR_RI"
                     /note="Leucine-rich repeats (LRRs), ribonuclease inhibitor
                     (RI)-like subfamily. LRRs are 20-29 residue sequence
                     motifs present in many proteins that participate in
                     protein-protein interactions and have different functions
                     and cellular locations. LRRs correspond...; cd00116"
                     /db_xref="CDD:238064"
     Site            order(843,845,848,850,865,871,873,876,878,896,899,901,904,
                     906,931,934,936,939,941,957,959,962,964,983,986,988,991,
                     993,1009,1012,1014,1017,1020,1038,1041,1043,1049,1051,
                     1069,1072,1074,1077,1079,1098,1101,1103,1106,1108,1126,
                     1129,1131,1134,1136,1156,1159,1161,1164,1166)
                     /site_type="active"
                     /note="Leucine-rich repeats [active]"
                     /db_xref="CDD:238064"
     Site            order(874..875,938,990,1016,1076,1102,1104,1130,1160)
                     /site_type="other"
                     /note="Substrate binding site [chemical binding]"
                     /db_xref="CDD:238064"
     Region          1038..1068
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1182
                     /gene="CIITA"
                     /coded_by="XM_061152815.1:224..3772"
                     /db_xref="GeneID:133063440"
ORIGIN      
        1 mnhfqtiltq vrmllsshrp sqvqalldnl laeellsrey hyallhesdg ealarkislt
       61 llekgdpdla lfgwiwsglq aptaerdpsy kdpggseqcp tmelgplegs ylellnssad
      121 plqlyhlydr mdltgeeeie lcsepdtdti nceqfsrllc dmegddetre ayaniaeldq
      181 yvfqdtqleg lskdiftfpe elpadlkhrk laepltmpvv tgtflvgpvs dslaqpcppp
      241 palfntepas sqtrlkdpap psssllscls lpagsiqiip tlptlpqglw pisgtgtgvs
      301 siliyqgeml pasqtppssd pavqslpksp drpgsaspfa psaadlpsmp epaltsranl
      361 tedemsptkc paadrasskl pkwpesveqf yqslrdkyqa qpagpegtlv emelvrvrle
      421 kssgksqere latldwaerq paqgglaevl laardrrqpr etrviavlgk aghgkshwar
      481 avsrawargq lpqydfvfci pchcldrpgt syrlqdllss lgpqalpvdd evfsyivrrp
      541 nrvllildaf eeleahdgsl hsaggpgsae prslrgllag llqrkllrgc tllltarprg
      601 rlaqslskad alfevagfsa qqaetyvrhy fesegtaehq eralallraq pfllshshsp
      661 ticravcqla eallqrsgea qlpstltgly vgllgpaard sppgalagla rlawelgrah
      721 qsglkedcfp saearawava qgwlrptpga petelafssf llqcflgavw lalsgeikdk
      781 elpqylaltp rkkrpydnwl egvprflvgl vfqphagclg algalagpaa ssladrkqkv
      841 ltrylkrlqp gtlqagrlle llhcaheald pglwqhvlqg lparlsflgt rltppdthvl
      901 graleaagrd fsldlrstgv dpsglgslvg lrcvagfraa lsdtvelwes lqergeakll
      961 raveekftie pfkaksmkdv edlsnlvqiq rtrssseeaa gelpavrdlk klefalgpvl
     1021 gpqvfpklvk ileaftslqh ldldslsenk igdegvaqla ttfpqlkale tlnlsqnnit
     1081 dvgacklaea lpalaasllr lslynncicd agaeslahvl pdmvslrvvd vqynkftaag
     1141 aqqlaaglrk cpqvktlamw tptipfgvqe hlqqldprii lr
//
LOCUS       XP_061008799            1181 aa            linear   MAM 02-DEC-2023
DEFINITION  MHC class II transactivator isoform X3 [Dama dama].
ACCESSION   XP_061008799
VERSION     XP_061008799.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152816.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1181
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1181
                     /product="MHC class II transactivator isoform X3"
                     /calculated_mol_wt=128682
     Region          <338..483
                     /region_name="PHA02682"
                     /note="ORF080 virion core protein; Provisional"
                     /db_xref="CDD:177464"
     Region          490..661
                     /region_name="NACHT"
                     /note="NACHT domain; pfam05729"
                     /db_xref="CDD:428606"
     Region          868..1157
                     /region_name="LRR_RI"
                     /note="Leucine-rich repeats (LRRs), ribonuclease inhibitor
                     (RI)-like subfamily. LRRs are 20-29 residue sequence
                     motifs present in many proteins that participate in
                     protein-protein interactions and have different functions
                     and cellular locations. LRRs correspond...; cd00116"
                     /db_xref="CDD:238064"
     Site            order(870,872,875,877,892,898,900,903,905,923,926,928,931,
                     933,958,961,963,966,968,984,986,989,991,1010,1013,1015,
                     1018,1020,1036,1039,1041,1044,1047,1065,1068,1070,1076,
                     1078,1096,1099,1101,1104,1106,1125,1128,1130,1133,1135,
                     1153,1156)
                     /site_type="active"
                     /note="Leucine-rich repeats [active]"
                     /db_xref="CDD:238064"
     Site            order(901..902,965,1017,1043,1103,1129,1131,1157)
                     /site_type="other"
                     /note="Substrate binding site [chemical binding]"
                     /db_xref="CDD:238064"
     Region          1065..1095
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1181
                     /gene="CIITA"
                     /coded_by="XM_061152816.1:226..3771"
                     /db_xref="GeneID:133063440"
ORIGIN      
        1 mnhfqtiltq vrmllsshrp sqvqalldnl laeellsrey hyallhesdg ealarkislt
       61 llekgdpdla lfgwiwsglq aptaerdpsy kdpggseqcp tmelgplegs ylellnssad
      121 plqlyhlydr mdltgeeeie lcsepdtdti nceqfsrllc dmegddetre ayaniaeldq
      181 yvfqdtqleg lskdifiehi gleemisesv evleeagqks qkrpfpeelp adlkhrklae
      241 pltmpvvtgt flvgpvsdsl aqpcppppal fntepassqt rlkdpappss sllsclslpa
      301 gsiqiiptlp tlpqglwpis gtgtgvssil iyqgemlpas qtppssdpav qslpkspdrp
      361 gsaspfapsa adlpsmpepa ltsranlted emsptkcpaa drassklpkw pesveqfyqs
      421 lrdkyqaqpa gpegtlveme lvrvrlekss gksqerelat ldwaerqpaq gglaevllaa
      481 rdrrqpretr viavlgkagh gkshwaravs rawargqlpq ydfvfcipch cldrpgtsyr
      541 lqdllsslgp qalpvddevf syivrrpnrv llildafeel eahdgslhsa ggpgsaeprs
      601 lrgllagllq rkllrgctll ltarprgrla qslskadalf evagfsaqqa etyvrhyfes
      661 egtaehqera lallraqpfl lshshsptic ravcqlaeal lqrsgeaqlp stltglyvgl
      721 lgpaardspp galaglarla welgrahqsg lkedcfpsae arawavaqgw lrptpgapet
      781 elafssfllq cflgavwlal sgeikdkelp qylaltprkk rpydnwlegv prflvglvfq
      841 phagclgalg alagpaassl adrkqkvltr ylkrlqpgtl qagrllellh cahealdpgl
      901 wqhvlqglpa rlsflgtrlt ppdthvlgra leaagrdfsl dlrstgvdps glgslvglrc
      961 vagfraalsd tvelweslqe rgeakllrav eekftiepfk aksmkdvedl snlvqiqrtr
     1021 ssseeaagel pavrdlkkle falgpvlgpq vfpklvkile aftslqhldl dslsenkigd
     1081 egvaqlattf pqlkaletln lsqnnitdvg acklaealpa laasllrlsl ynncicdaga
     1141 eslahvlpdm vslrvvemwt ptipfgvqeh lqqldpriil r
//
LOCUS       XP_061008800            1162 aa            linear   MAM 02-DEC-2023
DEFINITION  MHC class II transactivator isoform X4 [Dama dama].
ACCESSION   XP_061008800
VERSION     XP_061008800.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152817.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1162
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1162
                     /product="MHC class II transactivator isoform X4"
                     /calculated_mol_wt=126769
     Region          <282..>353
                     /region_name="PLN02983"
                     /note="biotin carboxyl carrier protein of acetyl-CoA
                     carboxylase"
                     /db_xref="CDD:215533"
     Region          443..614
                     /region_name="NACHT"
                     /note="NACHT domain; pfam05729"
                     /db_xref="CDD:428606"
     Region          821..1146
                     /region_name="LRR_RI"
                     /note="Leucine-rich repeats (LRRs), ribonuclease inhibitor
                     (RI)-like subfamily. LRRs are 20-29 residue sequence
                     motifs present in many proteins that participate in
                     protein-protein interactions and have different functions
                     and cellular locations. LRRs correspond...; cd00116"
                     /db_xref="CDD:238064"
     Site            order(823,825,828,830,845,851,853,856,858,876,879,881,884,
                     886,911,914,916,919,921,937,939,942,944,963,966,968,971,
                     973,989,992,994,997,1000,1018,1021,1023,1029,1031,1049,
                     1052,1054,1057,1059,1078,1081,1083,1086,1088,1106,1109,
                     1111,1114,1116,1136,1139,1141,1144,1146)
                     /site_type="active"
                     /note="Leucine-rich repeats [active]"
                     /db_xref="CDD:238064"
     Site            order(854..855,918,970,996,1056,1082,1084,1110,1140)
                     /site_type="other"
                     /note="Substrate binding site [chemical binding]"
                     /db_xref="CDD:238064"
     Region          1018..1048
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1162
                     /gene="CIITA"
                     /coded_by="XM_061152817.1:224..3712"
                     /db_xref="GeneID:133063440"
ORIGIN      
        1 mnhfqtiltq vrmllsshrp sqvqalldnl laeellsrey hyallhesdg ealarkislt
       61 llekgdpdla lfgwiwsglq aptaerdpsy kdpggseqcp tmelgplegs ylellnssad
      121 plqlyhlydr mdltgeeeie lcsepdtdti nceqfsrllc dmegddetre ayaniaeldq
      181 yvfqdtqleg lskdifiehi gleemisesv evleeagqks qkrpfpeelp adlkhrklap
      241 psssllscls lpagsiqiip tlptlpqglw pisgtgtgvs siliyqgeml pasqtppssd
      301 pavqslpksp drpgsaspfa psaadlpsmp epaltsranl tedemsptkc paadrasskl
      361 pkwpesveqf yqslrdkyqa qpagpegtlv emelvrvrle kssgksqere latldwaerq
      421 paqgglaevl laardrrqpr etrviavlgk aghgkshwar avsrawargq lpqydfvfci
      481 pchcldrpgt syrlqdllss lgpqalpvdd evfsyivrrp nrvllildaf eeleahdgsl
      541 hsaggpgsae prslrgllag llqrkllrgc tllltarprg rlaqslskad alfevagfsa
      601 qqaetyvrhy fesegtaehq eralallraq pfllshshsp ticravcqla eallqrsgea
      661 qlpstltgly vgllgpaard sppgalagla rlawelgrah qsglkedcfp saearawava
      721 qgwlrptpga petelafssf llqcflgavw lalsgeikdk elpqylaltp rkkrpydnwl
      781 egvprflvgl vfqphagclg algalagpaa ssladrkqkv ltrylkrlqp gtlqagrlle
      841 llhcaheald pglwqhvlqg lparlsflgt rltppdthvl graleaagrd fsldlrstgv
      901 dpsglgslvg lrcvagfraa lsdtvelwes lqergeakll raveekftie pfkaksmkdv
      961 edlsnlvqiq rtrssseeaa gelpavrdlk klefalgpvl gpqvfpklvk ileaftslqh
     1021 ldldslsenk igdegvaqla ttfpqlkale tlnlsqnnit dvgacklaea lpalaasllr
     1081 lslynncicd agaeslahvl pdmvslrvvd vqynkftaag aqqlaaglrk cpqvktlamw
     1141 tptipfgvqe hlqqldprii lr
//
LOCUS       XP_061008801            1108 aa            linear   MAM 02-DEC-2023
DEFINITION  MHC class II transactivator isoform X5 [Dama dama].
ACCESSION   XP_061008801
VERSION     XP_061008801.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152818.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1108
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1108
                     /product="MHC class II transactivator isoform X5"
                     /calculated_mol_wt=120313
     Region          <237..382
                     /region_name="PHA02682"
                     /note="ORF080 virion core protein; Provisional"
                     /db_xref="CDD:177464"
     Region          389..560
                     /region_name="NACHT"
                     /note="NACHT domain; pfam05729"
                     /db_xref="CDD:428606"
     Region          767..1092
                     /region_name="LRR_RI"
                     /note="Leucine-rich repeats (LRRs), ribonuclease inhibitor
                     (RI)-like subfamily. LRRs are 20-29 residue sequence
                     motifs present in many proteins that participate in
                     protein-protein interactions and have different functions
                     and cellular locations. LRRs correspond...; cd00116"
                     /db_xref="CDD:238064"
     Site            order(769,771,774,776,791,797,799,802,804,822,825,827,830,
                     832,857,860,862,865,867,883,885,888,890,909,912,914,917,
                     919,935,938,940,943,946,964,967,969,975,977,995,998,1000,
                     1003,1005,1024,1027,1029,1032,1034,1052,1055,1057,1060,
                     1062,1082,1085,1087,1090,1092)
                     /site_type="active"
                     /note="Leucine-rich repeats [active]"
                     /db_xref="CDD:238064"
     Site            order(800..801,864,916,942,1002,1028,1030,1056,1086)
                     /site_type="other"
                     /note="Substrate binding site [chemical binding]"
                     /db_xref="CDD:238064"
     Region          964..994
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1108
                     /gene="CIITA"
                     /coded_by="XM_061152818.1:81..3407"
                     /db_xref="GeneID:133063440"
ORIGIN      
        1 melgplegsy lellnssadp lqlyhlydrm dltgeeeiel csepdtdtin ceqfsrllcd
       61 megddetrea yaniaeldqy vfqdtqlegl skdifiehig leemisesve vleeagqksq
      121 krpfpeelpa dlkhrklaep ltmpvvtgtf lvgpvsdsla qpcppppalf ntepassqtr
      181 lkdpappsss llsclslpag siqiiptlpt lpqglwpisg tgtgvssili yqgemlpasq
      241 tppssdpavq slpkspdrpg saspfapsaa dlpsmpepal tsranltede msptkcpaad
      301 rassklpkwp esveqfyqsl rdkyqaqpag pegtlvemel vrvrlekssg ksqerelatl
      361 dwaerqpaqg glaevllaar drrqpretrv iavlgkaghg kshwaravsr awargqlpqy
      421 dfvfcipchc ldrpgtsyrl qdllsslgpq alpvddevfs yivrrpnrvl lildafeele
      481 ahdgslhsag gpgsaeprsl rgllagllqr kllrgctlll tarprgrlaq slskadalfe
      541 vagfsaqqae tyvrhyfese gtaehqeral allraqpfll shshspticr avcqlaeall
      601 qrsgeaqlps tltglyvgll gpaardsppg alaglarlaw elgrahqsgl kedcfpsaea
      661 rawavaqgwl rptpgapete lafssfllqc flgavwlals geikdkelpq ylaltprkkr
      721 pydnwlegvp rflvglvfqp hagclgalga lagpaassla drkqkvltry lkrlqpgtlq
      781 agrllellhc ahealdpglw qhvlqglpar lsflgtrltp pdthvlgral eaagrdfsld
      841 lrstgvdpsg lgslvglrcv agfraalsdt velweslqer geakllrave ekftiepfka
      901 ksmkdvedls nlvqiqrtrs sseeaagelp avrdlkklef algpvlgpqv fpklvkilea
      961 ftslqhldld slsenkigde gvaqlattfp qlkaletlnl sqnnitdvga cklaealpal
     1021 aasllrlsly nncicdagae slahvlpdmv slrvvdvqyn kftaagaqql aaglrkcpqv
     1081 ktlamwtpti pfgvqehlqq ldpriilr
//
LOCUS       XP_061008802            1135 aa            linear   MAM 02-DEC-2023
DEFINITION  MHC class II transactivator isoform X6 [Dama dama].
ACCESSION   XP_061008802
VERSION     XP_061008802.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152819.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1135
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1135
                     /product="MHC class II transactivator isoform X6"
                     /calculated_mol_wt=123722
     Region          <255..>326
                     /region_name="PLN02983"
                     /note="biotin carboxyl carrier protein of acetyl-CoA
                     carboxylase"
                     /db_xref="CDD:215533"
     Region          416..587
                     /region_name="NACHT"
                     /note="NACHT domain; pfam05729"
                     /db_xref="CDD:428606"
     Region          794..1119
                     /region_name="LRR_RI"
                     /note="Leucine-rich repeats (LRRs), ribonuclease inhibitor
                     (RI)-like subfamily. LRRs are 20-29 residue sequence
                     motifs present in many proteins that participate in
                     protein-protein interactions and have different functions
                     and cellular locations. LRRs correspond...; cd00116"
                     /db_xref="CDD:238064"
     Site            order(796,798,801,803,818,824,826,829,831,849,852,854,857,
                     859,884,887,889,892,894,910,912,915,917,936,939,941,944,
                     946,962,965,967,970,973,991,994,996,1002,1004,1022,1025,
                     1027,1030,1032,1051,1054,1056,1059,1061,1079,1082,1084,
                     1087,1089,1109,1112,1114,1117,1119)
                     /site_type="active"
                     /note="Leucine-rich repeats [active]"
                     /db_xref="CDD:238064"
     Site            order(827..828,891,943,969,1029,1055,1057,1083,1113)
                     /site_type="other"
                     /note="Substrate binding site [chemical binding]"
                     /db_xref="CDD:238064"
     Region          991..1021
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1135
                     /gene="CIITA"
                     /coded_by="XM_061152819.1:225..3632"
                     /db_xref="GeneID:133063440"
ORIGIN      
        1 mnhfqtiltq vrmllsshrp sqvqalldnl laeellsrey hyallhesdg ealarkislt
       61 llekgdpdla lfgwiwsglq aptaerdpsy kdpggseqcp tmelgplegs ylellnssad
      121 plqlyhlydr mdltgeeeie lcsepdtdti nceqfsrllc dmegddetre ayaniaeldq
      181 yvfqdtqleg lskdiftfpe elpadlkhrk lappssslls clslpagsiq iiptlptlpq
      241 glwpisgtgt gvssiliyqg emlpasqtpp ssdpavqslp kspdrpgsas pfapsaadlp
      301 smpepaltsr anltedemsp tkcpaadras sklpkwpesv eqfyqslrdk yqaqpagpeg
      361 tlvemelvrv rlekssgksq erelatldwa erqpaqggla evllaardrr qpretrviav
      421 lgkaghgksh waravsrawa rgqlpqydfv fcipchcldr pgtsyrlqdl lsslgpqalp
      481 vddevfsyiv rrpnrvllil dafeeleahd gslhsaggpg saeprslrgl lagllqrkll
      541 rgctllltar prgrlaqsls kadalfevag fsaqqaetyv rhyfesegta ehqeralall
      601 raqpfllshs hspticravc qlaeallqrs geaqlpstlt glyvgllgpa ardsppgala
      661 glarlawelg rahqsglked cfpsaearaw avaqgwlrpt pgapetelaf ssfllqcflg
      721 avwlalsgei kdkelpqyla ltprkkrpyd nwlegvprfl vglvfqphag clgalgalag
      781 paassladrk qkvltrylkr lqpgtlqagr llellhcahe aldpglwqhv lqglparlsf
      841 lgtrltppdt hvlgraleaa grdfsldlrs tgvdpsglgs lvglrcvagf raalsdtvel
      901 weslqergea kllraveekf tiepfkaksm kdvedlsnlv qiqrtrssse eaagelpavr
      961 dlkklefalg pvlgpqvfpk lvkileafts lqhldldsls enkigdegva qlattfpqlk
     1021 aletlnlsqn nitdvgackl aealpalaas llrlslynnc icdagaesla hvlpdmvslr
     1081 vvdvqynkft aagaqqlaag lrkcpqvktl amwtptipfg vqehlqqldp riilr
//
LOCUS       XP_061008803            1132 aa            linear   MAM 02-DEC-2023
DEFINITION  MHC class II transactivator isoform X7 [Dama dama].
ACCESSION   XP_061008803
VERSION     XP_061008803.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152820.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1132
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1132
                     /product="MHC class II transactivator isoform X7"
                     /calculated_mol_wt=122884
     Region          <261..406
                     /region_name="PHA02682"
                     /note="ORF080 virion core protein; Provisional"
                     /db_xref="CDD:177464"
     Region          413..584
                     /region_name="NACHT"
                     /note="NACHT domain; pfam05729"
                     /db_xref="CDD:428606"
     Region          791..1116
                     /region_name="LRR_RI"
                     /note="Leucine-rich repeats (LRRs), ribonuclease inhibitor
                     (RI)-like subfamily. LRRs are 20-29 residue sequence
                     motifs present in many proteins that participate in
                     protein-protein interactions and have different functions
                     and cellular locations. LRRs correspond...; cd00116"
                     /db_xref="CDD:238064"
     Site            order(793,795,798,800,815,821,823,826,828,846,849,851,854,
                     856,881,884,886,889,891,907,909,912,914,933,936,938,941,
                     943,959,962,964,967,970,988,991,993,999,1001,1019,1022,
                     1024,1027,1029,1048,1051,1053,1056,1058,1076,1079,1081,
                     1084,1086,1106,1109,1111,1114,1116)
                     /site_type="active"
                     /note="Leucine-rich repeats [active]"
                     /db_xref="CDD:238064"
     Site            order(824..825,888,940,966,1026,1052,1054,1080,1110)
                     /site_type="other"
                     /note="Substrate binding site [chemical binding]"
                     /db_xref="CDD:238064"
     Region          988..1018
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1132
                     /gene="CIITA"
                     /coded_by="XM_061152820.1:153..3551"
                     /db_xref="GeneID:133063440"
ORIGIN      
        1 mrclaprpag sylpepqgse qcptmelgpl egsylellns sadplqlyhl ydrmdltgee
       61 eielcsepdt dtinceqfsr llcdmegdde treayaniae ldqyvfqdtq leglskdifi
      121 ehigleemis esvevleeag qksqkrpfpe elpadlkhrk laepltmpvv tgtflvgpvs
      181 dslaqpcppp palfntepas sqtrlkdpap psssllscls lpagsiqiip tlptlpqglw
      241 pisgtgtgvs siliyqgeml pasqtppssd pavqslpksp drpgsaspfa psaadlpsmp
      301 epaltsranl tedemsptkc paadrasskl pkwpesveqf yqslrdkyqa qpagpegtlv
      361 emelvrvrle kssgksqere latldwaerq paqgglaevl laardrrqpr etrviavlgk
      421 aghgkshwar avsrawargq lpqydfvfci pchcldrpgt syrlqdllss lgpqalpvdd
      481 evfsyivrrp nrvllildaf eeleahdgsl hsaggpgsae prslrgllag llqrkllrgc
      541 tllltarprg rlaqslskad alfevagfsa qqaetyvrhy fesegtaehq eralallraq
      601 pfllshshsp ticravcqla eallqrsgea qlpstltgly vgllgpaard sppgalagla
      661 rlawelgrah qsglkedcfp saearawava qgwlrptpga petelafssf llqcflgavw
      721 lalsgeikdk elpqylaltp rkkrpydnwl egvprflvgl vfqphagclg algalagpaa
      781 ssladrkqkv ltrylkrlqp gtlqagrlle llhcaheald pglwqhvlqg lparlsflgt
      841 rltppdthvl graleaagrd fsldlrstgv dpsglgslvg lrcvagfraa lsdtvelwes
      901 lqergeakll raveekftie pfkaksmkdv edlsnlvqiq rtrssseeaa gelpavrdlk
      961 klefalgpvl gpqvfpklvk ileaftslqh ldldslsenk igdegvaqla ttfpqlkale
     1021 tlnlsqnnit dvgacklaea lpalaasllr lslynncicd agaeslahvl pdmvslrvvd
     1081 vqynkftaag aqqlaaglrk cpqvktlamw tptipfgvqe hlqqldprii lr
//
LOCUS       XP_061008804            1121 aa            linear   MAM 02-DEC-2023
DEFINITION  MHC class II transactivator isoform X8 [Dama dama].
ACCESSION   XP_061008804
VERSION     XP_061008804.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152821.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1121
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1121
                     /product="MHC class II transactivator isoform X8"
                     /calculated_mol_wt=121725
     Region          <250..395
                     /region_name="PHA02682"
                     /note="ORF080 virion core protein; Provisional"
                     /db_xref="CDD:177464"
     Region          402..573
                     /region_name="NACHT"
                     /note="NACHT domain; pfam05729"
                     /db_xref="CDD:428606"
     Region          780..1105
                     /region_name="LRR_RI"
                     /note="Leucine-rich repeats (LRRs), ribonuclease inhibitor
                     (RI)-like subfamily. LRRs are 20-29 residue sequence
                     motifs present in many proteins that participate in
                     protein-protein interactions and have different functions
                     and cellular locations. LRRs correspond...; cd00116"
                     /db_xref="CDD:238064"
     Site            order(782,784,787,789,804,810,812,815,817,835,838,840,843,
                     845,870,873,875,878,880,896,898,901,903,922,925,927,930,
                     932,948,951,953,956,959,977,980,982,988,990,1008,1011,
                     1013,1016,1018,1037,1040,1042,1045,1047,1065,1068,1070,
                     1073,1075,1095,1098,1100,1103,1105)
                     /site_type="active"
                     /note="Leucine-rich repeats [active]"
                     /db_xref="CDD:238064"
     Site            order(813..814,877,929,955,1015,1041,1043,1069,1099)
                     /site_type="other"
                     /note="Substrate binding site [chemical binding]"
                     /db_xref="CDD:238064"
     Region          977..1007
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1121
                     /gene="CIITA"
                     /coded_by="XM_061152821.1:255..3620"
                     /db_xref="GeneID:133063440"
ORIGIN      
        1 macqfqgseq cptmelgple gsylellnss adplqlyhly drmdltgeee ielcsepdtd
       61 tinceqfsrl lcdmegddet reayaniael dqyvfqdtql eglskdifie higleemise
      121 svevleeagq ksqkrpfpee lpadlkhrkl aepltmpvvt gtflvgpvsd slaqpcpppp
      181 alfntepass qtrlkdpapp sssllsclsl pagsiqiipt lptlpqglwp isgtgtgvss
      241 iliyqgemlp asqtppssdp avqslpkspd rpgsaspfap saadlpsmpe paltsranlt
      301 edemsptkcp aadrassklp kwpesveqfy qslrdkyqaq pagpegtlve melvrvrlek
      361 ssgksqerel atldwaerqp aqgglaevll aardrrqpre trviavlgka ghgkshwara
      421 vsrawargql pqydfvfcip chcldrpgts yrlqdllssl gpqalpvdde vfsyivrrpn
      481 rvllildafe eleahdgslh saggpgsaep rslrgllagl lqrkllrgct llltarprgr
      541 laqslskada lfevagfsaq qaetyvrhyf esegtaehqe ralallraqp fllshshspt
      601 icravcqlae allqrsgeaq lpstltglyv gllgpaards ppgalaglar lawelgrahq
      661 sglkedcfps aearawavaq gwlrptpgap etelafssfl lqcflgavwl alsgeikdke
      721 lpqylaltpr kkrpydnwle gvprflvglv fqphagclga lgalagpaas sladrkqkvl
      781 trylkrlqpg tlqagrllel lhcahealdp glwqhvlqgl parlsflgtr ltppdthvlg
      841 raleaagrdf sldlrstgvd psglgslvgl rcvagfraal sdtvelwesl qergeakllr
      901 aveekftiep fkaksmkdve dlsnlvqiqr trssseeaag elpavrdlkk lefalgpvlg
      961 pqvfpklvki leaftslqhl dldslsenki gdegvaqlat tfpqlkalet lnlsqnnitd
     1021 vgacklaeal palaasllrl slynncicda gaeslahvlp dmvslrvvdv qynkftaaga
     1081 qqlaaglrkc pqvktlamwt ptipfgvqeh lqqldpriil r
//
LOCUS       XP_061008805             120 aa            linear   MAM 02-DEC-2023
DEFINITION  dexamethasone-induced protein isoform X1 [Dama dama].
ACCESSION   XP_061008805
VERSION     XP_061008805.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152822.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..120
                     /product="dexamethasone-induced protein isoform X1"
                     /calculated_mol_wt=12776
     CDS             1..120
                     /gene="DEXI"
                     /coded_by="XM_061152822.1:66..428"
                     /db_xref="GeneID:133063442"
ORIGIN      
        1 mpllliegta wpgmgppgrg plrpprpacs pqklranrev pvraqnggte rlrrnakvrk
       61 ahaptrrvrq gcpetspacg vvhtasswll tfcllsgclh epsqsqppcf pppaasaypt
//
LOCUS       XP_061008807              95 aa            linear   MAM 02-DEC-2023
DEFINITION  dexamethasone-induced protein isoform X2 [Dama dama].
ACCESSION   XP_061008807
VERSION     XP_061008807.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152824.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..95
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..95
                     /product="dexamethasone-induced protein isoform X2"
                     /calculated_mol_wt=10192
     Region          1..95
                     /region_name="Dexa_ind"
                     /note="Dexamethasone-induced; pfam15198"
                     /db_xref="CDD:291852"
     CDS             1..95
                     /gene="DEXI"
                     /coded_by="XM_061152824.1:36..323"
                     /db_xref="GeneID:133063442"
ORIGIN      
        1 mpgarvaahl dalgplvpsv pppllpsmfy vglffvnvli lyyaflmeyi vlnvglvflp
       61 edmdqalvdl gvlsdpgsgl ydadseldvf dgyle
//
LOCUS       XP_061008808            1087 aa            linear   MAM 02-DEC-2023
DEFINITION  protein CLEC16A isoform X1 [Dama dama].
ACCESSION   XP_061008808
VERSION     XP_061008808.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152825.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1087
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1087
                     /product="protein CLEC16A isoform X1"
                     /calculated_mol_wt=120641
     Region          51..198
                     /region_name="FPL"
                     /note="Uncharacterized conserved protein; pfam09758"
                     /db_xref="CDD:462884"
     Region          243..1057
                     /region_name="CLEC16A_C"
                     /note="CLEC16A C-terminal; pfam19439"
                     /db_xref="CDD:466083"
     CDS             1..1087
                     /gene="CLEC16A"
                     /coded_by="XM_061152825.1:170..3433"
                     /db_xref="GeneID:133063445"
ORIGIN      
        1 mfgrsrswvg gghgkssrni hsldhlkyly hvltknttvt eqnrnllvet irsiteiliw
       61 gdqndssvfd ffleknmfvf flnilrqksg ryvcvqllqt lnilfenish etslyyllsn
      121 nyvnsiivhk fdfsdeeima yyisflktls lklnnhtvhf fynehtndfa lyteaikffn
      181 hpesmvriav rtitlnvykv dnqamlhyir dktavpyfsn lvwfigshvi eldncvqtde
      241 ehrnrgklsd lvaehldhlh ylndiliinc eflndvltdh llnrlflply vyslenqdeg
      301 gerpkislpv slyllsqvfl iihhaplvns laevilngdl setyakpeqd vqrscakpsi
      361 rcfikptetl erslemnkhk gkrrvqkrpn yknvgeeede ekgpaedaqe daekakgteg
      421 gskgiktsge neeiemvime rsklpelaas tsvqeqnttd eeksaatgld svqwsrpfld
      481 mvyhaldspd ddyhalfvlc llyamshnkg mdpekleriq lpvptaaekt tynhllaerl
      541 irimnnaaqp dgkirlatle lsclllkqqv vastgciikd vhlaclegar eesvhlarhf
      601 ykgeeifldm fedeyrsmtm kpmnveylmm dasillpptg tpltgidfvk rlpcgdvekt
      661 rrairvffml rslslqlrge petqlpltre edliktddvl dlnnsdliac tvvtkdggml
      721 qrflavdiyq mslvepdvsr lgwgvvkfag llqdmqvtgv eddsralnit ihkpassphs
      781 kpfpilqatf ifsdhircii akqrlakgri qarrmkmqri aalldlpiqp ttevlgfglg
      841 sssaqhlpfr fydqcrrgss dptvqrsvfa svdrvpgfav aqcinqhsss slsspspsas
      901 gspsgsgsts hcdsggasss stpsaaqspa gvagkdagec sacrrptvta atgfsasigs
      961 chgtsgsvte ddpmiteqpq pnlpdqlviv deteaearpg kslarsadve tvtlspslip
     1021 tqqptisllc edaadtlsve sltlvppvdr hslhaltgip ppppavvgte apgsgagrpe
     1081 padpaep
//
LOCUS       XP_061008809            1071 aa            linear   MAM 02-DEC-2023
DEFINITION  protein CLEC16A isoform X2 [Dama dama].
ACCESSION   XP_061008809
VERSION     XP_061008809.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152826.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1071
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1071
                     /product="protein CLEC16A isoform X2"
                     /calculated_mol_wt=119108
     Region          51..198
                     /region_name="FPL"
                     /note="Uncharacterized conserved protein; pfam09758"
                     /db_xref="CDD:462884"
     Region          243..1041
                     /region_name="CLEC16A_C"
                     /note="CLEC16A C-terminal; pfam19439"
                     /db_xref="CDD:466083"
     CDS             1..1071
                     /gene="CLEC16A"
                     /coded_by="XM_061152826.1:170..3385"
                     /db_xref="GeneID:133063445"
ORIGIN      
        1 mfgrsrswvg gghgkssrni hsldhlkyly hvltknttvt eqnrnllvet irsiteiliw
       61 gdqndssvfd ffleknmfvf flnilrqksg ryvcvqllqt lnilfenish etslyyllsn
      121 nyvnsiivhk fdfsdeeima yyisflktls lklnnhtvhf fynehtndfa lyteaikffn
      181 hpesmvriav rtitlnvykv dnqamlhyir dktavpyfsn lvwfigshvi eldncvqtde
      241 ehrnrgklsd lvaehldhlh ylndiliinc eflndvltdh llnrlflply vyslenqdeg
      301 gerpkislpv slyllsqvfl iihhaplvns laevilngdl setyakpeqd vqrscakpsi
      361 rcfikptetl erslemnkhk gkrrvqkrpn yknvgeeede ekgpaedaqe daekakeiem
      421 vimersklpe laastsvqeq nttdeeksaa tgldsvqwsr pfldmvyhal dspdddyhal
      481 fvlcllyams hnkgmdpekl eriqlpvpta aekttynhll aerlirimnn aaqpdgkirl
      541 atlelsclll kqqvvastgc iikdvhlacl egareesvhl arhfykgeei fldmfedeyr
      601 smtmkpmnve ylmmdasill pptgtpltgi dfvkrlpcgd vektrrairv ffmlrslslq
      661 lrgepetqlp ltreedlikt ddvldlnnsd liactvvtkd ggmlqrflav diyqmslvep
      721 dvsrlgwgvv kfagllqdmq vtgveddsra lnitihkpas sphskpfpil qatfifsdhi
      781 rciiakqrla kgriqarrmk mqriaalldl piqpttevlg fglgsssaqh lpfrfydqcr
      841 rgssdptvqr svfasvdrvp gfavaqcinq hsssslssps psasgspsgs gstshcdsgg
      901 asssstpsaa qspagvagkd agecsacrrp tvtaatgfsa sigschgtsg svteddpmit
      961 eqpqpnlpdq lvivdeteae arpgkslars advetvtlsp sliptqqpti sllcedaadt
     1021 lsvesltlvp pvdrhslhal tgipppppav vgteapgsga grpepadpae p
//
LOCUS       XP_061008810            1047 aa            linear   MAM 02-DEC-2023
DEFINITION  protein CLEC16A isoform X3 [Dama dama].
ACCESSION   XP_061008810
VERSION     XP_061008810.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152827.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1047
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1047
                     /product="protein CLEC16A isoform X3"
                     /calculated_mol_wt=116871
     Region          51..198
                     /region_name="FPL"
                     /note="Uncharacterized conserved protein; pfam09758"
                     /db_xref="CDD:462884"
     Region          243..1017
                     /region_name="CLEC16A_C"
                     /note="CLEC16A C-terminal; pfam19439"
                     /db_xref="CDD:466083"
     CDS             1..1047
                     /gene="CLEC16A"
                     /coded_by="XM_061152827.1:170..3313"
                     /db_xref="GeneID:133063445"
ORIGIN      
        1 mfgrsrswvg gghgkssrni hsldhlkyly hvltknttvt eqnrnllvet irsiteiliw
       61 gdqndssvfd ffleknmfvf flnilrqksg ryvcvqllqt lnilfenish etslyyllsn
      121 nyvnsiivhk fdfsdeeima yyisflktls lklnnhtvhf fynehtndfa lyteaikffn
      181 hpesmvriav rtitlnvykv dnqamlhyir dktavpyfsn lvwfigshvi eldncvqtde
      241 ehrnrgklsd lvaehldhlh ylndiliinc eflndvltdh llnrlflply vyslenqdeg
      301 gerpkislpv slyllsqvfl iihhaplvns laevilngdl setyakpeqd vqrscakpsi
      361 rcfikptetl erslemnkhk gkrrvqkrpn yknvgeeede ekgpaedaqe daekakgteg
      421 gskgiktsge neeiemvime rsklpelaas tsvqeqnttd eeksaatgld svqwsrpfld
      481 mvyhaldspd ddyhalfvlc llyamshnkg mdpekleriq lpvptaaekt tynhllaerl
      541 irimnnaaqp dgkirlatle lsclllkqqv vastgciikd vhlaclegar eesvhlarhf
      601 ykgeeifldm fedeyrsmtm kpmnveylmm dasillpptg tpltgidfvk rlpcgdvekt
      661 rrairvffml rslslqlrge petqlpltre edliktddvl dlnnsdliac tvvtkdggml
      721 qrflavdiyq mslvepdvsr lgwgvvkfag llqdmqvtgv eddsralnit ihkpassphs
      781 kpfpilqatf ifsdhircii akqrlakgri qarrmkmqri aalldlpiqp ttevlgfglg
      841 sssaqhlpfr fydqcrrgss dptvqrsvfa svdrvpgfav aqcinqhsss slsspspsas
      901 gspsgsgsts hcdsggasss stpsaaqspa ddpmiteqpq pnlpdqlviv deteaearpg
      961 kslarsadve tvtlspslip tqqptisllc edaadtlsve sltlvppvdr hslhaltgip
     1021 ppppavvgte apgsgagrpe padpaep
//
LOCUS       XP_061008811            1032 aa            linear   MAM 02-DEC-2023
DEFINITION  protein CLEC16A isoform X4 [Dama dama].
ACCESSION   XP_061008811
VERSION     XP_061008811.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152828.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1032
                     /product="protein CLEC16A isoform X4"
                     /calculated_mol_wt=114638
     Region          51..198
                     /region_name="FPL"
                     /note="Uncharacterized conserved protein; pfam09758"
                     /db_xref="CDD:462884"
     Region          243..1002
                     /region_name="CLEC16A_C"
                     /note="CLEC16A C-terminal; pfam19439"
                     /db_xref="CDD:466083"
     CDS             1..1032
                     /gene="CLEC16A"
                     /coded_by="XM_061152828.1:170..3268"
                     /db_xref="GeneID:133063445"
ORIGIN      
        1 mfgrsrswvg gghgkssrni hsldhlkyly hvltknttvt eqnrnllvet irsiteiliw
       61 gdqndssvfd ffleknmfvf flnilrqksg ryvcvqllqt lnilfenish etslyyllsn
      121 nyvnsiivhk fdfsdeeima yyisflktls lklnnhtvhf fynehtndfa lyteaikffn
      181 hpesmvriav rtitlnvykv dnqamlhyir dktavpyfsn lvwfigshvi eldncvqtde
      241 ehrnrgklsd lvaehldhlh ylndiliinc eflndvltdh llnrlflply vyslenqdeg
      301 gerpkislpv slyllsqvfl iihhaplvns laevilngdl setyakpeqd vqrscakpsi
      361 rcfikptetl erslemnkhk gkrrvqkrpn yknvgeeede ekgpaedaqe daekakgteg
      421 gskgiktsge neeiemvime rsklpelaas tsvqeqnttd eeksaatgld svqwsrpfld
      481 mvyhaldspd ddyhalfvlc llyamshnkg mdpekleriq lpvptaaekt tynhllaerl
      541 irimnnaaqp dgkirlatle lsclllkqqv vastgciikd vhlaclegar eesvhlarhf
      601 ykgeeifldm fedeyrsmtm kpmnveylmm dasillpptg tpltgidfvk rlpcgdvekt
      661 rrairvffml rslslqlrge petqlpltre edliktddvl dlnnsdliac tvvtkdggml
      721 qrflavdiyq mslvepdvsr lgwgvvkfag llqdmqvtgv eddsralnit ihkpassphs
      781 kpfpilqatf ifsdhircii akqrlakgri qarrmkmqri agfavaqcin qhsssslssp
      841 spsasgspsg sgstshcdsg gasssstpsa aqspagvagk dagecsacrr ptvtaatgfs
      901 asigschgts gsvteddpmi teqpqpnlpd qlvivdetea earpgkslar sadvetvtls
      961 psliptqqpt isllcedaad tlsvesltlv ppvdrhslha ltgipppppa vvgteapgsg
     1021 agrpepadpa ep
//
LOCUS       XP_061008812            1031 aa            linear   MAM 02-DEC-2023
DEFINITION  protein CLEC16A isoform X5 [Dama dama].
ACCESSION   XP_061008812
VERSION     XP_061008812.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152829.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1031
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1031
                     /product="protein CLEC16A isoform X5"
                     /calculated_mol_wt=115339
     Region          51..198
                     /region_name="FPL"
                     /note="Uncharacterized conserved protein; pfam09758"
                     /db_xref="CDD:462884"
     Region          243..1001
                     /region_name="CLEC16A_C"
                     /note="CLEC16A C-terminal; pfam19439"
                     /db_xref="CDD:466083"
     CDS             1..1031
                     /gene="CLEC16A"
                     /coded_by="XM_061152829.1:170..3265"
                     /db_xref="GeneID:133063445"
ORIGIN      
        1 mfgrsrswvg gghgkssrni hsldhlkyly hvltknttvt eqnrnllvet irsiteiliw
       61 gdqndssvfd ffleknmfvf flnilrqksg ryvcvqllqt lnilfenish etslyyllsn
      121 nyvnsiivhk fdfsdeeima yyisflktls lklnnhtvhf fynehtndfa lyteaikffn
      181 hpesmvriav rtitlnvykv dnqamlhyir dktavpyfsn lvwfigshvi eldncvqtde
      241 ehrnrgklsd lvaehldhlh ylndiliinc eflndvltdh llnrlflply vyslenqdeg
      301 gerpkislpv slyllsqvfl iihhaplvns laevilngdl setyakpeqd vqrscakpsi
      361 rcfikptetl erslemnkhk gkrrvqkrpn yknvgeeede ekgpaedaqe daekakeiem
      421 vimersklpe laastsvqeq nttdeeksaa tgldsvqwsr pfldmvyhal dspdddyhal
      481 fvlcllyams hnkgmdpekl eriqlpvpta aekttynhll aerlirimnn aaqpdgkirl
      541 atlelsclll kqqvvastgc iikdvhlacl egareesvhl arhfykgeei fldmfedeyr
      601 smtmkpmnve ylmmdasill pptgtpltgi dfvkrlpcgd vektrrairv ffmlrslslq
      661 lrgepetqlp ltreedlikt ddvldlnnsd liactvvtkd ggmlqrflav diyqmslvep
      721 dvsrlgwgvv kfagllqdmq vtgveddsra lnitihkpas sphskpfpil qatfifsdhi
      781 rciiakqrla kgriqarrmk mqriaalldl piqpttevlg fglgsssaqh lpfrfydqcr
      841 rgssdptvqr svfasvdrvp gfavaqcinq hsssslssps psasgspsgs gstshcdsgg
      901 asssstpsaa qspaddpmit eqpqpnlpdq lvivdeteae arpgkslars advetvtlsp
      961 sliptqqpti sllcedaadt lsvesltlvp pvdrhslhal tgipppppav vgteapgsga
     1021 grpepadpae p
//
LOCUS       XP_061008813             993 aa            linear   MAM 02-DEC-2023
DEFINITION  protein CLEC16A isoform X6 [Dama dama].
ACCESSION   XP_061008813
VERSION     XP_061008813.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152830.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..993
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..993
                     /product="protein CLEC16A isoform X6"
                     /calculated_mol_wt=111948
     Region          51..198
                     /region_name="FPL"
                     /note="Uncharacterized conserved protein; pfam09758"
                     /db_xref="CDD:462884"
     Region          243..963
                     /region_name="CLEC16A_C"
                     /note="CLEC16A C-terminal; pfam19439"
                     /db_xref="CDD:466083"
     CDS             1..993
                     /gene="CLEC16A"
                     /coded_by="XM_061152830.1:170..3151"
                     /db_xref="GeneID:133063445"
ORIGIN      
        1 mfgrsrswvg gghgkssrni hsldhlkyly hvltknttvt eqnrnllvet irsiteiliw
       61 gdqndssvfd ffleknmfvf flnilrqksg ryvcvqllqt lnilfenish etslyyllsn
      121 nyvnsiivhk fdfsdeeima yyisflktls lklnnhtvhf fynehtndfa lyteaikffn
      181 hpesmvriav rtitlnvykv dnqamlhyir dktavpyfsn lvwfigshvi eldncvqtde
      241 ehrnrgklsd lvaehldhlh ylndiliinc eflndvltdh llnrlflply vyslenqdeg
      301 gerpkislpv slyllsqvfl iihhaplvns laevilngdl setyakpeqd vqrscakpsi
      361 rcfikptetl erslemnkhk gkrrvqkrpn yknvgeeede ekgpaedaqe daekakgteg
      421 gskgiktsge neeiemvime rsklpelaas tsvqeqnttd eeksaatgld svqwsrpfld
      481 mvyhaldspd ddyhalfvlc llyamshnkg mdpekleriq lpvptaaekt tynhllaerl
      541 irimnnaaqp dgkirlatle lsclllkqqv vastgciikd vhlaclegar eesvhlarhf
      601 ykgeeifldm fedeyrsmtm kpmnveylmm dasillpptg tpltgidfvk rlpcgdvekt
      661 rrairvffml rslslqlrge petqlpltre edliktddvl dlnnsdliac tvvtkdggml
      721 qrflavdiyq mslvepdvsr lgwgvvkfag llqdmqvtgv eddsralnit ihkpassphs
      781 kpfpilqatf ifsdhircii akqrlakgri qarrmkmqri aalldlpiqp ttevlgfglg
      841 sssaqhlpfr fydqcrrgss dptvqrsvfa svdrvpddpm iteqpqpnlp dqlvivdete
      901 aearpgksla rsadvetvtl spsliptqqp tisllcedaa dtlsvesltl vppvdrhslh
      961 altgippppp avvgteapgs gagrpepadp aep
//
LOCUS       XP_061008814             955 aa            linear   MAM 02-DEC-2023
DEFINITION  protein CLEC16A isoform X7 [Dama dama].
ACCESSION   XP_061008814
VERSION     XP_061008814.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152831.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..955
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..955
                     /product="protein CLEC16A isoform X7"
                     /calculated_mol_wt=107599
     Region          51..198
                     /region_name="FPL"
                     /note="Uncharacterized conserved protein; pfam09758"
                     /db_xref="CDD:462884"
     Region          243..887
                     /region_name="CLEC16A_C"
                     /note="CLEC16A C-terminal; pfam19439"
                     /db_xref="CDD:466083"
     CDS             1..955
                     /gene="CLEC16A"
                     /coded_by="XM_061152831.1:170..3037"
                     /db_xref="GeneID:133063445"
ORIGIN      
        1 mfgrsrswvg gghgkssrni hsldhlkyly hvltknttvt eqnrnllvet irsiteiliw
       61 gdqndssvfd ffleknmfvf flnilrqksg ryvcvqllqt lnilfenish etslyyllsn
      121 nyvnsiivhk fdfsdeeima yyisflktls lklnnhtvhf fynehtndfa lyteaikffn
      181 hpesmvriav rtitlnvykv dnqamlhyir dktavpyfsn lvwfigshvi eldncvqtde
      241 ehrnrgklsd lvaehldhlh ylndiliinc eflndvltdh llnrlflply vyslenqdeg
      301 gerpkislpv slyllsqvfl iihhaplvns laevilngdl setyakpeqd vqrscakpsi
      361 rcfikptetl erslemnkhk gkrrvqkrpn yknvgeeede ekgpaedaqe daekakgteg
      421 gskgiktsge neeiemvime rsklpelaas tsvqeqnttd eeksaatgld svqwsrpfld
      481 mvyhaldspd ddyhalfvlc llyamshnkg mdpekleriq lpvptaaekt tynhllaerl
      541 irimnnaaqp dgkirlatle lsclllkqqv vastgciikd vhlaclegar eesvhlarhf
      601 ykgeeifldm fedeyrsmtm kpmnveylmm dasillpptg tpltgidfvk rlpcgdvekt
      661 rrairvffml rslslqlrge petqlpltre edliktddvl dlnnsdliac tvvtkdggml
      721 qrflavdiyq mslvepdvsr lgwgvvkfag llqdmqvtgv eddsralnit ihkpassphs
      781 kpfpilqatf ifsdhircii akqrlakgri qarrmkmqri aalldlpiqp ttevlgfglg
      841 sssaqhlpfr fydqcrrgss dptvqrsvfa svdrvpgfav aqcinqhsss slsspspsas
      901 gspsgsgsts hcdsggasss stpsaaqspa vrsgrkgrrr vfslseadsh gghwv
//
LOCUS       XP_061008815             925 aa            linear   MAM 02-DEC-2023
DEFINITION  protein CLEC16A isoform X8 [Dama dama].
ACCESSION   XP_061008815
VERSION     XP_061008815.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152832.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..925
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..925
                     /product="protein CLEC16A isoform X8"
                     /calculated_mol_wt=105010
     Region          51..198
                     /region_name="FPL"
                     /note="Uncharacterized conserved protein; pfam09758"
                     /db_xref="CDD:462884"
     Region          243..904
                     /region_name="CLEC16A_C"
                     /note="CLEC16A C-terminal; pfam19439"
                     /db_xref="CDD:466083"
     CDS             1..925
                     /gene="CLEC16A"
                     /coded_by="XM_061152832.1:170..2947"
                     /db_xref="GeneID:133063445"
ORIGIN      
        1 mfgrsrswvg gghgkssrni hsldhlkyly hvltknttvt eqnrnllvet irsiteiliw
       61 gdqndssvfd ffleknmfvf flnilrqksg ryvcvqllqt lnilfenish etslyyllsn
      121 nyvnsiivhk fdfsdeeima yyisflktls lklnnhtvhf fynehtndfa lyteaikffn
      181 hpesmvriav rtitlnvykv dnqamlhyir dktavpyfsn lvwfigshvi eldncvqtde
      241 ehrnrgklsd lvaehldhlh ylndiliinc eflndvltdh llnrlflply vyslenqdeg
      301 gerpkislpv slyllsqvfl iihhaplvns laevilngdl setyakpeqd vqrscakpsi
      361 rcfikptetl erslemnkhk gkrrvqkrpn yknvgeeede ekgpaedaqe daekakgteg
      421 gskgiktsge neeiemvime rsklpelaas tsvqeqnttd eeksaatgld svqwsrpfld
      481 mvyhaldspd ddyhalfvlc llyamshnkg mdpekleriq lpvptaaekt tynhllaerl
      541 irimnnaaqp dgkirlatle lsclllkqqv vastgciikd vhlaclegar eesvhlarhf
      601 ykgeeifldm fedeyrsmtm kpmnveylmm dasillpptg tpltgidfvk rlpcgdvekt
      661 rrairvffml rslslqlrge petqlpltre edliktddvl dlnnsdliac tvvtkdggml
      721 qrflavdiyq mslvepdvsr lgwgvvkfag llqdmqvtgv eddsralnit ihkpassphs
      781 kpfpilqatf ifsdhircii akqrlakgri qarrmkmqri aalldlpiqp ttevlgfglg
      841 sssaqhlpfr fydqcrrgss dptvqrsvfa svdrvpgggk ektsigcssp fnileehlpt
      901 spfgkrknpp spcappppps pifdr
//
LOCUS       XP_061008816             903 aa            linear   MAM 02-DEC-2023
DEFINITION  protein CLEC16A isoform X9 [Dama dama].
ACCESSION   XP_061008816
VERSION     XP_061008816.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152833.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..903
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..903
                     /product="protein CLEC16A isoform X9"
                     /calculated_mol_wt=98906
     Region          59..873
                     /region_name="CLEC16A_C"
                     /note="CLEC16A C-terminal; pfam19439"
                     /db_xref="CDD:466083"
     CDS             1..903
                     /gene="CLEC16A"
                     /coded_by="XM_061152833.1:177..2888"
                     /db_xref="GeneID:133063445"
ORIGIN      
        1 mvriavrtit lnvykvdnqa mlhyirdkta vpyfsnlvwf igshvieldn cvqtdeehrn
       61 rgklsdlvae hldhlhylnd iliincefln dvltdhllnr lflplyvysl enqdeggerp
      121 kislpvslyl lsqvfliihh aplvnslaev ilngdlsety akpeqdvqrs cakpsircfi
      181 kptetlersl emnkhkgkrr vqkrpnyknv geeedeekgp aedaqedaek akgteggskg
      241 iktsgeneei emvimerskl pelaastsvq eqnttdeeks aatgldsvqw srpfldmvyh
      301 aldspdddyh alfvlcllya mshnkgmdpe kleriqlpvp taaekttynh llaerlirim
      361 nnaaqpdgki rlatlelscl llkqqvvast gciikdvhla clegareesv hlarhfykge
      421 eifldmfede yrsmtmkpmn veylmmdasi llpptgtplt gidfvkrlpc gdvektrrai
      481 rvffmlrsls lqlrgepetq lpltreedli ktddvldlnn sdliactvvt kdggmlqrfl
      541 avdiyqmslv epdvsrlgwg vvkfagllqd mqvtgvedds ralnitihkp assphskpfp
      601 ilqatfifsd hirciiakqr lakgriqarr mkmqriaall dlpiqpttev lgfglgsssa
      661 qhlpfrfydq crrgssdptv qrsvfasvdr vpgfavaqci nqhsssslss pspsasgsps
      721 gsgstshcds ggasssstps aaqspagvag kdagecsacr rptvtaatgf sasigschgt
      781 sgsvteddpm iteqpqpnlp dqlvivdete aearpgksla rsadvetvtl spsliptqqp
      841 tisllcedaa dtlsvesltl vppvdrhslh altgippppp avvgteapgs gagrpepadp
      901 aep
//
LOCUS       XP_061008818             898 aa            linear   MAM 02-DEC-2023
DEFINITION  protein CLEC16A isoform X10 [Dama dama].
ACCESSION   XP_061008818
VERSION     XP_061008818.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152835.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..898
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..898
                     /product="protein CLEC16A isoform X10"
                     /calculated_mol_wt=102061
     Region          51..198
                     /region_name="FPL"
                     /note="Uncharacterized conserved protein; pfam09758"
                     /db_xref="CDD:462884"
     Region          243..877
                     /region_name="CLEC16A_C"
                     /note="CLEC16A C-terminal; pfam19439"
                     /db_xref="CDD:466083"
     CDS             1..898
                     /gene="CLEC16A"
                     /coded_by="XM_061152835.1:170..2866"
                     /db_xref="GeneID:133063445"
ORIGIN      
        1 mfgrsrswvg gghgkssrni hsldhlkyly hvltknttvt eqnrnllvet irsiteiliw
       61 gdqndssvfd ffleknmfvf flnilrqksg ryvcvqllqt lnilfenish etslyyllsn
      121 nyvnsiivhk fdfsdeeima yyisflktls lklnnhtvhf fynehtndfa lyteaikffn
      181 hpesmvriav rtitlnvykv dnqamlhyir dktavpyfsn lvwfigshvi eldncvqtde
      241 ehrnrgklsd lvaehldhlh ylndiliinc eflndvltdh llnrlflply vyslenqdeg
      301 gerpkislpv slyllsqvfl iihhaplvns laevilngdl setyakpeqd vqrscakpsi
      361 rcfikptetl erslemnkhk gkrrvqkrpn yknvgeeede ekgpaedaqe daekakgteg
      421 gskgiktsge neeiemvime rsklpelaas tsvqeqnttd eeksaatgld svqwsrpfld
      481 mvyhaldspd ddyhalfvlc llyamshnkg mdpekleriq lpvptaaekt tynhllaerl
      541 irimnnaaqp dgkirlatle lsclllkqqv vastgciikd vhlaclegar eesvhlarhf
      601 ykgeeifldm fedeyrsmtm kpmnveylmm dasillpptg tpltgidfvk rlpcgdvekt
      661 rrairvffml rslslqlrge petqlpltre edliktddvl dlnnsdliac tvvtkdggml
      721 qrflavdiyq mslvepdvsr lgwgvvkfag llqdmqvtgv eddsralnit ihkpassphs
      781 kpfpilqatf ifsdhircii akqrlakgri qarrmkmqri aalldlpiqp ttevlgfglg
      841 sssaqhlpfr fydqcrrgss dptvqrsvfa svdrvpgdsg sipgretgip hateqlsl
//
LOCUS       XP_061008819             889 aa            linear   MAM 02-DEC-2023
DEFINITION  protein CLEC16A isoform X11 [Dama dama].
ACCESSION   XP_061008819
VERSION     XP_061008819.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152836.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..889
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..889
                     /product="protein CLEC16A isoform X11"
                     /calculated_mol_wt=101327
     Region          51..198
                     /region_name="FPL"
                     /note="Uncharacterized conserved protein; pfam09758"
                     /db_xref="CDD:462884"
     Region          243..883
                     /region_name="CLEC16A_C"
                     /note="CLEC16A C-terminal; pfam19439"
                     /db_xref="CDD:466083"
     CDS             1..889
                     /gene="CLEC16A"
                     /coded_by="XM_061152836.1:170..2839"
                     /db_xref="GeneID:133063445"
ORIGIN      
        1 mfgrsrswvg gghgkssrni hsldhlkyly hvltknttvt eqnrnllvet irsiteiliw
       61 gdqndssvfd ffleknmfvf flnilrqksg ryvcvqllqt lnilfenish etslyyllsn
      121 nyvnsiivhk fdfsdeeima yyisflktls lklnnhtvhf fynehtndfa lyteaikffn
      181 hpesmvriav rtitlnvykv dnqamlhyir dktavpyfsn lvwfigshvi eldncvqtde
      241 ehrnrgklsd lvaehldhlh ylndiliinc eflndvltdh llnrlflply vyslenqdeg
      301 gerpkislpv slyllsqvfl iihhaplvns laevilngdl setyakpeqd vqrscakpsi
      361 rcfikptetl erslemnkhk gkrrvqkrpn yknvgeeede ekgpaedaqe daekakgteg
      421 gskgiktsge neeiemvime rsklpelaas tsvqeqnttd eeksaatgld svqwsrpfld
      481 mvyhaldspd ddyhalfvlc llyamshnkg mdpekleriq lpvptaaekt tynhllaerl
      541 irimnnaaqp dgkirlatle lsclllkqqv vastgciikd vhlaclegar eesvhlarhf
      601 ykgeeifldm fedeyrsmtm kpmnveylmm dasillpptg tpltgidfvk rlpcgdvekt
      661 rrairvffml rslslqlrge petqlpltre edliktddvl dlnnsdliac tvvtkdggml
      721 qrflavdiyq mslvepdvsr lgwgvvkfag llqdmqvtgv eddsralnit ihkpassphs
      781 kpfpilqatf ifsdhircii akqrlakgri qarrmkmqri aalldlpiqp ttevlgfglg
      841 sssaqhlpfr fydqcrrgss dptvqrsvfa svdrvpgiel rlcqalclr
//
LOCUS       XP_061008820             880 aa            linear   MAM 02-DEC-2023
DEFINITION  protein CLEC16A isoform X12 [Dama dama].
ACCESSION   XP_061008820
VERSION     XP_061008820.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152837.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..880
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..880
                     /product="protein CLEC16A isoform X12"
                     /calculated_mol_wt=100288
     Region          51..198
                     /region_name="FPL"
                     /note="Uncharacterized conserved protein; pfam09758"
                     /db_xref="CDD:462884"
     Region          243..880
                     /region_name="CLEC16A_C"
                     /note="CLEC16A C-terminal; pfam19439"
                     /db_xref="CDD:466083"
     CDS             1..880
                     /gene="CLEC16A"
                     /coded_by="XM_061152837.1:170..2812"
                     /db_xref="GeneID:133063445"
ORIGIN      
        1 mfgrsrswvg gghgkssrni hsldhlkyly hvltknttvt eqnrnllvet irsiteiliw
       61 gdqndssvfd ffleknmfvf flnilrqksg ryvcvqllqt lnilfenish etslyyllsn
      121 nyvnsiivhk fdfsdeeima yyisflktls lklnnhtvhf fynehtndfa lyteaikffn
      181 hpesmvriav rtitlnvykv dnqamlhyir dktavpyfsn lvwfigshvi eldncvqtde
      241 ehrnrgklsd lvaehldhlh ylndiliinc eflndvltdh llnrlflply vyslenqdeg
      301 gerpkislpv slyllsqvfl iihhaplvns laevilngdl setyakpeqd vqrscakpsi
      361 rcfikptetl erslemnkhk gkrrvqkrpn yknvgeeede ekgpaedaqe daekakgteg
      421 gskgiktsge neeiemvime rsklpelaas tsvqeqnttd eeksaatgld svqwsrpfld
      481 mvyhaldspd ddyhalfvlc llyamshnkg mdpekleriq lpvptaaekt tynhllaerl
      541 irimnnaaqp dgkirlatle lsclllkqqv vastgciikd vhlaclegar eesvhlarhf
      601 ykgeeifldm fedeyrsmtm kpmnveylmm dasillpptg tpltgidfvk rlpcgdvekt
      661 rrairvffml rslslqlrge petqlpltre edliktddvl dlnnsdliac tvvtkdggml
      721 qrflavdiyq mslvepdvsr lgwgvvkfag llqdmqvtgv eddsralnit ihkpassphs
      781 kpfpilqatf ifsdhircii akqrlakgri qarrmkmqri aalldlpiqp ttevlgfglg
      841 sssaqhlpfr fydqcrrgss dptvqrsvfa svdrvpgfqv
//
LOCUS       XP_061008821             260 aa            linear   MAM 02-DEC-2023
DEFINITION  suppressor of cytokine signaling 1 isoform X1 [Dama dama].
ACCESSION   XP_061008821
VERSION     XP_061008821.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152838.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..260
                     /product="suppressor of cytokine signaling 1 isoform X1"
                     /calculated_mol_wt=28824
     Region          117..214
                     /region_name="SH2_SOCS1"
                     /note="Src homology 2 (SH2) domain found in suppressor of
                     cytokine signaling (SOCS) proteins; cd10382"
                     /db_xref="CDD:198245"
     Site            order(135,153,155,163,176)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198245"
     Site            order(186,188,203)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198245"
     Region          218..260
                     /region_name="SOCS"
                     /note="SOCS (suppressors of cytokine signaling) box. The
                     SOCS box is found in the C-terminal region of CIS/SOCS
                     family proteins (in combination with a SH2 domain), ASBs
                     (ankyrin repeat-containing proteins with a SOCS box), SSBs
                     (SPRY domain-containing proteins...; cl02533"
                     /db_xref="CDD:470605"
     Site            order(219..224,230,237,243)
                     /site_type="active"
                     /note="elongin B/C interaction [active]"
                     /db_xref="CDD:239641"
     CDS             1..260
                     /gene="SOCS1"
                     /coded_by="XM_061152838.1:411..1193"
                     /db_xref="GeneID:133063447"
ORIGIN      
        1 mrrrpsrgsg trwagrwrqq srgvpahprt lwptppagpa crmvahnqva adnaistaae
       61 prrrpessss sssssstssp ssaaparlrp cpaapapapg dthfrtfrsh aeyrritras
      121 alldacgfyw gplsvhgahe rlraepvgtf lvrdsrqrnc ffalsvkmas gptsirvhfq
      181 agrfhldgsr esfdclfell ehyvaaprrm lgaplrqrrv rplqelcrqr ivatvgrenl
      241 ariplnpvlr dylssfpfqi
//
LOCUS       XP_061008822             218 aa            linear   MAM 02-DEC-2023
DEFINITION  suppressor of cytokine signaling 1 isoform X2 [Dama dama].
ACCESSION   XP_061008822
VERSION     XP_061008822.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152839.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..218
                     /product="suppressor of cytokine signaling 1 isoform X2"
                     /calculated_mol_wt=24049
     Region          75..172
                     /region_name="SH2_SOCS1"
                     /note="Src homology 2 (SH2) domain found in suppressor of
                     cytokine signaling (SOCS) proteins; cd10382"
                     /db_xref="CDD:198245"
     Site            order(93,111,113,121,134)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198245"
     Site            order(144,146,161)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198245"
     Region          176..218
                     /region_name="SOCS"
                     /note="SOCS (suppressors of cytokine signaling) box. The
                     SOCS box is found in the C-terminal region of CIS/SOCS
                     family proteins (in combination with a SH2 domain), ASBs
                     (ankyrin repeat-containing proteins with a SOCS box), SSBs
                     (SPRY domain-containing proteins...; cl02533"
                     /db_xref="CDD:470605"
     Site            order(177..182,188,195,201)
                     /site_type="active"
                     /note="elongin B/C interaction [active]"
                     /db_xref="CDD:239641"
     CDS             1..218
                     /gene="SOCS1"
                     /coded_by="XM_061152839.1:234..890"
                     /db_xref="GeneID:133063447"
ORIGIN      
        1 mvahnqvaad naistaaepr rrpessssss sssstsspss aaparlrpcp aapapapgdt
       61 hfrtfrshae yrritrasal ldacgfywgp lsvhgaherl raepvgtflv rdsrqrncff
      121 alsvkmasgp tsirvhfqag rfhldgsres fdclfelleh yvaaprrmlg aplrqrrvrp
      181 lqelcrqriv atvgrenlar iplnpvlrdy lssfpfqi
//
LOCUS       XP_061008823             218 aa            linear   MAM 02-DEC-2023
DEFINITION  suppressor of cytokine signaling 1 isoform X2 [Dama dama].
ACCESSION   XP_061008823
VERSION     XP_061008823.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152840.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..218
                     /product="suppressor of cytokine signaling 1 isoform X2"
                     /calculated_mol_wt=24049
     Region          75..172
                     /region_name="SH2_SOCS1"
                     /note="Src homology 2 (SH2) domain found in suppressor of
                     cytokine signaling (SOCS) proteins; cd10382"
                     /db_xref="CDD:198245"
     Site            order(93,111,113,121,134)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198245"
     Site            order(144,146,161)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198245"
     Region          176..218
                     /region_name="SOCS"
                     /note="SOCS (suppressors of cytokine signaling) box. The
                     SOCS box is found in the C-terminal region of CIS/SOCS
                     family proteins (in combination with a SH2 domain), ASBs
                     (ankyrin repeat-containing proteins with a SOCS box), SSBs
                     (SPRY domain-containing proteins...; cl02533"
                     /db_xref="CDD:470605"
     Site            order(177..182,188,195,201)
                     /site_type="active"
                     /note="elongin B/C interaction [active]"
                     /db_xref="CDD:239641"
     CDS             1..218
                     /gene="SOCS1"
                     /coded_by="XM_061152840.1:168..824"
                     /db_xref="GeneID:133063447"
ORIGIN      
        1 mvahnqvaad naistaaepr rrpessssss sssstsspss aaparlrpcp aapapapgdt
       61 hfrtfrshae yrritrasal ldacgfywgp lsvhgaherl raepvgtflv rdsrqrncff
      121 alsvkmasgp tsirvhfqag rfhldgsres fdclfelleh yvaaprrmlg aplrqrrvrp
      181 lqelcrqriv atvgrenlar iplnpvlrdy lssfpfqi
//
LOCUS       XP_061008824             148 aa            linear   MAM 02-DEC-2023
DEFINITION  recQ-mediated genome instability protein 2 [Dama dama].
ACCESSION   XP_061008824
VERSION     XP_061008824.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152841.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..148
                     /product="recQ-mediated genome instability protein 2"
                     /calculated_mol_wt=15870
     Region          22..144
                     /region_name="RMI2"
                     /note="RecQ-mediated genome instability protein 2;
                     pfam16100"
                     /db_xref="CDD:465022"
     CDS             1..148
                     /gene="RMI2"
                     /coded_by="XM_061152841.1:17..463"
                     /db_xref="GeneID:133063448"
ORIGIN      
        1 maapteslps sgptavrlpr lpplkvlaeq lrrdaeggpg swrlsraaag repleltavw
       61 mqgtvveagg gearlrdpsg ffsvrglerv prgrpclvpg kyvmvmgvvq acspepclqa
      121 vkmtdlsdnp lheslwelev edlhklip
//
LOCUS       XP_061008826             161 aa            linear   MAM 02-DEC-2023
DEFINITION  lipopolysaccharide-induced tumor necrosis factor-alpha factor [Dama
            dama].
ACCESSION   XP_061008826
VERSION     XP_061008826.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152843.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..161
                     /product="lipopolysaccharide-induced tumor necrosis
                     factor-alpha factor"
                     /calculated_mol_wt=16834
     Region          89..159
                     /region_name="zf-LITAF-like"
                     /note="LITAF-like zinc ribbon domain; pfam10601"
                     /db_xref="CDD:463165"
     CDS             1..161
                     /gene="LITAF"
                     /coded_by="XM_061152843.1:113..598"
                     /db_xref="GeneID:133063450"
ORIGIN      
        1 msvpgsyqaa agpsavptap psyeetvavn syyptppapt pgpntglmtg pdgkgmnppa
       61 yytqpvpvpn anaiavqtvy vqqpvsfydr pvqmccpscn kmivtqlsyn agaltwlscg
      121 slcllgciag ccfipfcvda lqdvdhhcpn ckallgtykr l
//
LOCUS       XP_061008827             161 aa            linear   MAM 02-DEC-2023
DEFINITION  lipopolysaccharide-induced tumor necrosis factor-alpha factor [Dama
            dama].
ACCESSION   XP_061008827
VERSION     XP_061008827.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152844.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..161
                     /product="lipopolysaccharide-induced tumor necrosis
                     factor-alpha factor"
                     /calculated_mol_wt=16834
     Region          89..159
                     /region_name="zf-LITAF-like"
                     /note="LITAF-like zinc ribbon domain; pfam10601"
                     /db_xref="CDD:463165"
     CDS             1..161
                     /gene="LITAF"
                     /coded_by="XM_061152844.1:113..598"
                     /db_xref="GeneID:133063450"
ORIGIN      
        1 msvpgsyqaa agpsavptap psyeetvavn syyptppapt pgpntglmtg pdgkgmnppa
       61 yytqpvpvpn anaiavqtvy vqqpvsfydr pvqmccpscn kmivtqlsyn agaltwlscg
      121 slcllgciag ccfipfcvda lqdvdhhcpn ckallgtykr l
//
LOCUS       XP_061008828             955 aa            linear   MAM 02-DEC-2023
DEFINITION  thioredoxin domain-containing protein 11 isoform X1 [Dama dama].
ACCESSION   XP_061008828
VERSION     XP_061008828.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152845.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..955
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..955
                     /product="thioredoxin domain-containing protein 11 isoform
                     X1"
                     /calculated_mol_wt=106917
     Region          94..206
                     /region_name="PDI_a_EFP1_N"
                     /note="PDIa family, N-terminal EFP1 subfamily; EFP1 is a
                     binding partner protein of thyroid oxidase (ThOX), also
                     called Duox. ThOX proteins are responsible for the
                     generation of hydrogen peroxide, a crucial substrate of
                     thyroperoxidase, which functions to...; cd03006"
                     /db_xref="CDD:239304"
     Site            134
                     /site_type="active"
                     /note="putative catalytic residue [active]"
                     /db_xref="CDD:239304"
     Region          213..320
                     /region_name="PDI_b_family"
                     /note="Protein Disulfide Isomerase (PDIb) family, redox
                     inactive TRX-like domain b; composed of eukaryotic
                     proteins involved in oxidative protein folding in the
                     endoplasmic reticulum (ER) by acting as catalysts and
                     folding assistants. Members of this family...; cd02981"
                     /db_xref="CDD:239279"
     Region          261..398
                     /region_name="Thioredoxin_6"
                     /note="Thioredoxin-like domain; pfam13848"
                     /db_xref="CDD:463999"
     Region          <477..768
                     /region_name="PTZ00102"
                     /note="disulphide isomerase; Provisional"
                     /db_xref="CDD:240266"
     Region          662..764
                     /region_name="PDI_a_PDI_a'_C"
                     /note="PDIa family, C-terminal TRX domain (a') subfamily;
                     composed of the C-terminal redox active a' domains of PDI,
                     ERp72, ERp57 (or ERp60) and EFP1. PDI, ERp72 and ERp57 are
                     endoplasmic reticulum (ER)-resident eukaryotic proteins
                     involved in oxidative protein...; cd02995"
                     /db_xref="CDD:239293"
     Site            order(689,692,755)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239293"
     Region          <786..>903
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..955
                     /gene="TXNDC11"
                     /coded_by="XM_061152845.1:85..2952"
                     /db_xref="GeneID:133063453"
ORIGIN      
        1 msecggrggg gssssddaed egggggpags gslspapaas segrlrrglr gaslmarrrp
       61 ellcgavalg calllalkft csrakdviip akppvsffss rspvldlfqg qldyaehirr
      121 dsevvllffy apwcgqsiaa raeieqaasr lsdqvlfvai ncwwnqgkcr kqkhffyfpv
      181 iylyhrsfgp ieykgpmsav yiekfvrrvm kpvlyipsqs elldflsnye pgvlgyfefn
      241 gspqppgylt fftsalhslk kdylgtvrfg vitnkhlakl vslvhsgsvy lhrhfntslv
      301 fprevinyta eniykwalen retllrwlrp hggkslllnn elkkgpalfv fipfnplaes
      361 hplideitev aleynnchgd qvverllqhl rrvdtpvfks lapepparlp dpplitaspc
      421 cntvvlprwh sisrthnvce lcvnqtagsl rpssvtvpqc sffemaaald sfylkeqtfy
      481 hvasgsiecs nflsfyspfs yytaccrtin rgvagfidse qgvfetppia fsslekkcev
      541 eslgsvphie enrylfpele ansssftgls crtnktlniy lldsnlfwly aerlgapsaa
      601 rvkefaaivd vkeeshyild pkqalmkftl esfiqnfsvl ysplkrhlig sdstqftsqr
      661 litevttdtf wevvlqkqdv lllyyaqwcg fcpalnhvfi qlarllpsdt ftvaridvsq
      721 ndlpwefmvd rlptvlffpc nrkdlsvkyp edlpitlpnl lrfilhhsdp asargnlagp
      781 ptaeclqsea alqqghiahl erevrklrae igalqraqaq vearlagarr dehrllrqqh
      841 tlerqhgllr lhseqlraly eqktreldgv arrlqelada setlltentw lkilvaamer
      901 klegrdgadd rvppsrarse hpeppgaprl ptstpppanv sstlasersp enrtd
//
LOCUS       XP_061008829             877 aa            linear   MAM 02-DEC-2023
DEFINITION  thioredoxin domain-containing protein 11 isoform X2 [Dama dama].
ACCESSION   XP_061008829
VERSION     XP_061008829.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152846.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..877
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..877
                     /product="thioredoxin domain-containing protein 11 isoform
                     X2"
                     /calculated_mol_wt=99543
     Region          16..128
                     /region_name="PDI_a_EFP1_N"
                     /note="PDIa family, N-terminal EFP1 subfamily; EFP1 is a
                     binding partner protein of thyroid oxidase (ThOX), also
                     called Duox. ThOX proteins are responsible for the
                     generation of hydrogen peroxide, a crucial substrate of
                     thyroperoxidase, which functions to...; cd03006"
                     /db_xref="CDD:239304"
     Site            56
                     /site_type="active"
                     /note="putative catalytic residue [active]"
                     /db_xref="CDD:239304"
     Region          135..242
                     /region_name="PDI_b_family"
                     /note="Protein Disulfide Isomerase (PDIb) family, redox
                     inactive TRX-like domain b; composed of eukaryotic
                     proteins involved in oxidative protein folding in the
                     endoplasmic reticulum (ER) by acting as catalysts and
                     folding assistants. Members of this family...; cd02981"
                     /db_xref="CDD:239279"
     Region          183..320
                     /region_name="Thioredoxin_6"
                     /note="Thioredoxin-like domain; pfam13848"
                     /db_xref="CDD:463999"
     Region          <399..690
                     /region_name="PTZ00102"
                     /note="disulphide isomerase; Provisional"
                     /db_xref="CDD:240266"
     Region          584..686
                     /region_name="PDI_a_PDI_a'_C"
                     /note="PDIa family, C-terminal TRX domain (a') subfamily;
                     composed of the C-terminal redox active a' domains of PDI,
                     ERp72, ERp57 (or ERp60) and EFP1. PDI, ERp72 and ERp57 are
                     endoplasmic reticulum (ER)-resident eukaryotic proteins
                     involved in oxidative protein...; cd02995"
                     /db_xref="CDD:239293"
     Site            order(611,614,677)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239293"
     Region          <708..>825
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..877
                     /gene="TXNDC11"
                     /coded_by="XM_061152846.1:16..2649"
                     /db_xref="GeneID:133063453"
ORIGIN      
        1 miifrakdvi ipakppvsff ssrspvldlf qgqldyaehi rrdsevvllf fyapwcgqsi
       61 aaraeieqaa srlsdqvlfv aincwwnqgk crkqkhffyf pviylyhrsf gpieykgpms
      121 avyiekfvrr vmkpvlyips qselldflsn yepgvlgyfe fngspqppgy ltfftsalhs
      181 lkkdylgtvr fgvitnkhla klvslvhsgs vylhrhfnts lvfpreviny taeniykwal
      241 enretllrwl rphggkslll nnelkkgpal fvfipfnpla eshplideit evaleynnch
      301 gdqvverllq hlrrvdtpvf kslapeppar lpdpplitas pccntvvlpr whsisrthnv
      361 celcvnqtag slrpssvtvp qcsffemaaa ldsfylkeqt fyhvasgsie csnflsfysp
      421 fsyytaccrt inrgvagfid seqgvfetpp iafsslekkc eveslgsvph ieenrylfpe
      481 leansssftg lscrtnktln iylldsnlfw lyaerlgaps aarvkefaai vdvkeeshyi
      541 ldpkqalmkf tlesfiqnfs vlysplkrhl igsdstqfts qrlitevttd tfwevvlqkq
      601 dvlllyyaqw cgfcpalnhv fiqlarllps dtftvaridv sqndlpwefm vdrlptvlff
      661 pcnrkdlsvk ypedlpitlp nllrfilhhs dpasargnla gpptaeclqs eaalqqghia
      721 hlerevrklr aeigalqraq aqvearlaga rrdehrllrq qhtlerqhgl lrlhseqlra
      781 lyeqktreld gvarrlqela dasetllten twlkilvaam erklegrdga ddrvppsrar
      841 sehpeppgap rlptstpppa nvsstlaser spenrtd
//
LOCUS       XP_061008830             825 aa            linear   MAM 02-DEC-2023
DEFINITION  thioredoxin domain-containing protein 11 isoform X3 [Dama dama].
ACCESSION   XP_061008830
VERSION     XP_061008830.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152847.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..825
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..825
                     /product="thioredoxin domain-containing protein 11 isoform
                     X3"
                     /calculated_mol_wt=92785
     Region          40..>100
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
     Region          131..268
                     /region_name="Thioredoxin_6"
                     /note="Thioredoxin-like domain; pfam13848"
                     /db_xref="CDD:463999"
     Region          <347..638
                     /region_name="PTZ00102"
                     /note="disulphide isomerase; Provisional"
                     /db_xref="CDD:240266"
     Region          532..634
                     /region_name="PDI_a_PDI_a'_C"
                     /note="PDIa family, C-terminal TRX domain (a') subfamily;
                     composed of the C-terminal redox active a' domains of PDI,
                     ERp72, ERp57 (or ERp60) and EFP1. PDI, ERp72 and ERp57 are
                     endoplasmic reticulum (ER)-resident eukaryotic proteins
                     involved in oxidative protein...; cd02995"
                     /db_xref="CDD:239293"
     Site            order(559,562,625)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239293"
     Region          <656..>773
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..825
                     /gene="TXNDC11"
                     /coded_by="XM_061152847.1:77..2554"
                     /db_xref="GeneID:133063453"
ORIGIN      
        1 marrrpellc gavalgcall lalkftcsra kdviipakpp vsffssrspv ldlfqgqldy
       61 aehirrdsev vllffyapwc gqsiaaraei eqaasrlsdq pgvlgyfefn gspqppgylt
      121 fftsalhslk kdylgtvrfg vitnkhlakl vslvhsgsvy lhrhfntslv fprevinyta
      181 eniykwalen retllrwlrp hggkslllnn elkkgpalfv fipfnplaes hplideitev
      241 aleynnchgd qvverllqhl rrvdtpvfks lapepparlp dpplitaspc cntvvlprwh
      301 sisrthnvce lcvnqtagsl rpssvtvpqc sffemaaald sfylkeqtfy hvasgsiecs
      361 nflsfyspfs yytaccrtin rgvagfidse qgvfetppia fsslekkcev eslgsvphie
      421 enrylfpele ansssftgls crtnktlniy lldsnlfwly aerlgapsaa rvkefaaivd
      481 vkeeshyild pkqalmkftl esfiqnfsvl ysplkrhlig sdstqftsqr litevttdtf
      541 wevvlqkqdv lllyyaqwcg fcpalnhvfi qlarllpsdt ftvaridvsq ndlpwefmvd
      601 rlptvlffpc nrkdlsvkyp edlpitlpnl lrfilhhsdp asargnlagp ptaeclqsea
      661 alqqghiahl erevrklrae igalqraqaq vearlagarr dehrllrqqh tlerqhgllr
      721 lhseqlraly eqktreldgv arrlqelada setlltentw lkilvaamer klegrdgadd
      781 rvppsrarse hpeppgaprl ptstpppanv sstlasersp enrtd
//
LOCUS       XP_061008832             744 aa            linear   MAM 02-DEC-2023
DEFINITION  thioredoxin domain-containing protein 11 isoform X4 [Dama dama].
ACCESSION   XP_061008832
VERSION     XP_061008832.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152849.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..744
                     /product="thioredoxin domain-containing protein 11 isoform
                     X4"
                     /calculated_mol_wt=83881
     Region          50..187
                     /region_name="Thioredoxin_6"
                     /note="Thioredoxin-like domain; pfam13848"
                     /db_xref="CDD:463999"
     Region          <266..557
                     /region_name="PTZ00102"
                     /note="disulphide isomerase; Provisional"
                     /db_xref="CDD:240266"
     Region          451..553
                     /region_name="PDI_a_PDI_a'_C"
                     /note="PDIa family, C-terminal TRX domain (a') subfamily;
                     composed of the C-terminal redox active a' domains of PDI,
                     ERp72, ERp57 (or ERp60) and EFP1. PDI, ERp72 and ERp57 are
                     endoplasmic reticulum (ER)-resident eukaryotic proteins
                     involved in oxidative protein...; cd02995"
                     /db_xref="CDD:239293"
     Site            order(478,481,544)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239293"
     Region          <575..>692
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..744
                     /gene="TXNDC11"
                     /coded_by="XM_061152849.1:463..2697"
                     /db_xref="GeneID:133063453"
ORIGIN      
        1 mqktetlflf scnisvssep gvlgyfefng spqppgyltf ftsalhslkk dylgtvrfgv
       61 itnkhlaklv slvhsgsvyl hrhfntslvf previnytae niykwalenr etllrwlrph
      121 ggkslllnne lkkgpalfvf ipfnplaesh plideiteva leynnchgdq vverllqhlr
      181 rvdtpvfksl apepparlpd pplitaspcc ntvvlprwhs isrthnvcel cvnqtagslr
      241 pssvtvpqcs ffemaaalds fylkeqtfyh vasgsiecsn flsfyspfsy ytaccrtinr
      301 gvagfidseq gvfetppiaf sslekkceve slgsvphiee nrylfpelea nsssftglsc
      361 rtnktlniyl ldsnlfwlya erlgapsaar vkefaaivdv keeshyildp kqalmkftle
      421 sfiqnfsvly splkrhligs dstqftsqrl itevttdtfw evvlqkqdvl llyyaqwcgf
      481 cpalnhvfiq larllpsdtf tvaridvsqn dlpwefmvdr lptvlffpcn rkdlsvkype
      541 dlpitlpnll rfilhhsdpa sargnlagpp taeclqseaa lqqghiahle revrklraei
      601 galqraqaqv earlagarrd ehrllrqqht lerqhgllrl hseqlralye qktreldgva
      661 rrlqeladas etlltentwl kilvaamerk legrdgaddr vppsrarseh peppgaprlp
      721 tstpppanvs stlaserspe nrtd
//
LOCUS       XP_061008833              87 aa            linear   MAM 02-DEC-2023
DEFINITION  stannin [Dama dama].
ACCESSION   XP_061008833
VERSION     XP_061008833.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152850.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..87
                     /product="stannin"
                     /calculated_mol_wt=9235
     Region          4..87
                     /region_name="Stannin"
                     /note="cd20257"
                     /db_xref="CDD:380774"
     Site            39..45
                     /site_type="other"
                     /note="putative 14-3-3zeta binding site [polypeptide
                     binding]"
                     /db_xref="CDD:380774"
     CDS             1..87
                     /gene="SNN"
                     /coded_by="XM_061152850.1:184..447"
                     /db_xref="GeneID:133063454"
ORIGIN      
        1 msimdhsptt gvvtvivili aiaalgalil gcwcylrlqr isqsedeesi vgdgetkepf
       61 llvqysakgp cverkakltp ngpevhg
//
LOCUS       XP_061008834              87 aa            linear   MAM 02-DEC-2023
DEFINITION  stannin [Dama dama].
ACCESSION   XP_061008834
VERSION     XP_061008834.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152851.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..87
                     /product="stannin"
                     /calculated_mol_wt=9235
     Region          4..87
                     /region_name="Stannin"
                     /note="cd20257"
                     /db_xref="CDD:380774"
     Site            39..45
                     /site_type="other"
                     /note="putative 14-3-3zeta binding site [polypeptide
                     binding]"
                     /db_xref="CDD:380774"
     CDS             1..87
                     /gene="SNN"
                     /coded_by="XM_061152851.1:105..368"
                     /db_xref="GeneID:133063454"
ORIGIN      
        1 msimdhsptt gvvtvivili aiaalgalil gcwcylrlqr isqsedeesi vgdgetkepf
       61 llvqysakgp cverkakltp ngpevhg
//
LOCUS       XP_061008835             972 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger CCCH domain-containing protein 7A [Dama dama].
ACCESSION   XP_061008835
VERSION     XP_061008835.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152852.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..972
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..972
                     /product="zinc finger CCCH domain-containing protein 7A"
                     /calculated_mol_wt=110223
     Region          6..>169
                     /region_name="3a0801s09"
                     /note="mitochondrial precursor proteins import receptor
                     (72 kDa mitochondrial outermembrane protein)
                     (mitochondrial import receptor for the ADP/ATP carrier)
                     (translocase of outermembrane tom70); TIGR00990"
                     /db_xref="CDD:273380"
     Region          46..71
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(47..48,51..52,54,90,93..94,97..98,100..101,124,
                     127..128,131..132,135)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          86..118
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          123..149
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          858..883
                     /region_name="zf-C2H2_jaz"
                     /note="Zinc-finger double-stranded RNA-binding; pfam12171"
                     /db_xref="CDD:432381"
     Region          860..882
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          907..927
                     /region_name="ZnF_C3H1"
                     /note="zinc finger; smart00356"
                     /db_xref="CDD:214632"
     CDS             1..972
                     /gene="ZC3H7A"
                     /coded_by="XM_061152852.1:141..3059"
                     /db_xref="GeneID:133063455"
ORIGIN      
        1 mssvseerrk rqqnikeglq fiqsplsypg tqeqyavylr alvrnlfneg ndvyrerdwn
       61 hsisqyseal siadyaksee ilipkeiiek lyinriacys nmgfhdkvle dcdtvlslna
      121 snykalyrks kalsdlgrfr eaydavakcs lavpqdehvi kltqelaqkl gfkirkayvr
      181 aelslksvpg dgatkalncs vediepdllt prqealsvvs ipassfshqv gnelasvsim
      241 pltsvlplqv eesslpstvl anggkipfst peaflddgdm vlgdeiddll dsapetnetv
      301 mpsalvrgpl paasvgpsvp fsaasllgal pigaryapap sfselypplt ssledfcssl
      361 nsfsmseskr dlststsreg talnnsnssl llmngpgslf apenflgisn hprndfgnff
      421 gsavtkpass vtprhplegt helrqacqic fiksgpklmd ftyhanldhk ckkdiligri
      481 knvedkswkk irprptktny egpyyickdv aaeeecrysg hctfaycqee idvwtlerkg
      541 afsreaffgg ngkisftvfk lfqehlgefi flcekcfdhk prmiskrnkd nstscshpvt
      601 khefednkcl vhilrettvk yskirsfhgq cqldlcrhev rygclredec fyahslvelk
      661 vwilqnetgi shddiaqesk rywqnleani pgaqvlgnqi mpgslnmkik fvcaqclrng
      721 qviepdknrk ycsakarhsw tkdrramrvm sierkkwmni rplptkkqmp lqfdlcnhia
      781 sgkkcqyvgn csfahspeer evwtymkeng iqdmeqfyel wlksqkneks ddaasqsske
      841 ngkqihmptd yaevtvdfhc wmcgkncnse kqwqghisse khkekvfhte ddqycwqhrf
      901 ptgyfsicdr ymngtctegs sckfahgnae lheweerrda lkmklnkark dhliapndnd
      961 fgkysflfkd ln
//
LOCUS       XP_061008836             972 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger CCCH domain-containing protein 7A [Dama dama].
ACCESSION   XP_061008836
VERSION     XP_061008836.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152853.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..972
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..972
                     /product="zinc finger CCCH domain-containing protein 7A"
                     /calculated_mol_wt=110223
     Region          6..>169
                     /region_name="3a0801s09"
                     /note="mitochondrial precursor proteins import receptor
                     (72 kDa mitochondrial outermembrane protein)
                     (mitochondrial import receptor for the ADP/ATP carrier)
                     (translocase of outermembrane tom70); TIGR00990"
                     /db_xref="CDD:273380"
     Region          46..71
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(47..48,51..52,54,90,93..94,97..98,100..101,124,
                     127..128,131..132,135)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          86..118
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          123..149
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          858..883
                     /region_name="zf-C2H2_jaz"
                     /note="Zinc-finger double-stranded RNA-binding; pfam12171"
                     /db_xref="CDD:432381"
     Region          860..882
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          907..927
                     /region_name="ZnF_C3H1"
                     /note="zinc finger; smart00356"
                     /db_xref="CDD:214632"
     CDS             1..972
                     /gene="ZC3H7A"
                     /coded_by="XM_061152853.1:55..2973"
                     /db_xref="GeneID:133063455"
ORIGIN      
        1 mssvseerrk rqqnikeglq fiqsplsypg tqeqyavylr alvrnlfneg ndvyrerdwn
       61 hsisqyseal siadyaksee ilipkeiiek lyinriacys nmgfhdkvle dcdtvlslna
      121 snykalyrks kalsdlgrfr eaydavakcs lavpqdehvi kltqelaqkl gfkirkayvr
      181 aelslksvpg dgatkalncs vediepdllt prqealsvvs ipassfshqv gnelasvsim
      241 pltsvlplqv eesslpstvl anggkipfst peaflddgdm vlgdeiddll dsapetnetv
      301 mpsalvrgpl paasvgpsvp fsaasllgal pigaryapap sfselypplt ssledfcssl
      361 nsfsmseskr dlststsreg talnnsnssl llmngpgslf apenflgisn hprndfgnff
      421 gsavtkpass vtprhplegt helrqacqic fiksgpklmd ftyhanldhk ckkdiligri
      481 knvedkswkk irprptktny egpyyickdv aaeeecrysg hctfaycqee idvwtlerkg
      541 afsreaffgg ngkisftvfk lfqehlgefi flcekcfdhk prmiskrnkd nstscshpvt
      601 khefednkcl vhilrettvk yskirsfhgq cqldlcrhev rygclredec fyahslvelk
      661 vwilqnetgi shddiaqesk rywqnleani pgaqvlgnqi mpgslnmkik fvcaqclrng
      721 qviepdknrk ycsakarhsw tkdrramrvm sierkkwmni rplptkkqmp lqfdlcnhia
      781 sgkkcqyvgn csfahspeer evwtymkeng iqdmeqfyel wlksqkneks ddaasqsske
      841 ngkqihmptd yaevtvdfhc wmcgkncnse kqwqghisse khkekvfhte ddqycwqhrf
      901 ptgyfsicdr ymngtctegs sckfahgnae lheweerrda lkmklnkark dhliapndnd
      961 fgkysflfkd ln
//
LOCUS       XP_061008837             638 aa            linear   MAM 02-DEC-2023
DEFINITION  eukaryotic peptide chain release factor GTP-binding subunit ERF3A
            isoform X1 [Dama dama].
ACCESSION   XP_061008837
VERSION     XP_061008837.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152854.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..638
                     /product="eukaryotic peptide chain release factor
                     GTP-binding subunit ERF3A isoform X1"
                     /calculated_mol_wt=68672
     Region          64..80
                     /region_name="PAM2"
                     /note="Ataxin-2 C-terminal region; pfam07145"
                     /db_xref="CDD:429316"
     Region          208..637
                     /region_name="TEF1"
                     /note="Translation elongation factor EF-1alpha (GTPase)
                     [Translation, ribosomal structure and biogenesis];
                     COG5256"
                     /db_xref="CDD:444074"
     CDS             1..638
                     /gene="GSPT1"
                     /coded_by="XM_061152854.1:289..2205"
                     /db_xref="GeneID:133063457"
ORIGIN      
        1 mdpgsggggg ggggggssss sdsapdcwdq admeapgpgp cggaggplaa aaaeaqrehl
       61 saafsrqlnv nakpfvpnvh aaefvpsflr gpaqspaspa gaaannhgag sgaggpsapv
      121 essqeeqsll cegsnsavsm elsepiveng etemspeesw ehkeeiseae pdggslgdgr
      181 pteegaqemm eeeeeipkpk svvappgapk kehvnvvfig hvdagkstig gqimyltgmv
      241 dkrtlekyer eakeknretw ylswaldtnq eerdkgktve vgrayfetdk khftildapg
      301 hksfvpnmig gasqadlavl visarkgefe tgfekggqtr ehamlaktag vkhlivlink
      361 mddptvnwsn eryeeckekl vpflkkvgfn pkkdihfmpc sgltganlke qsdfcpwyig
      421 lpfipyldnl pnfnrsvdgp irlpivdkyk dmgtvvlgkl esgsickgqq lvmmpnkhnv
      481 evlgilsddv etdsvapgen lkirlkgiee eeilpgfilc dpnnlchsgr tfdaqiviie
      541 hksiicpgyn avlhihtcie eveitalicl vdkksgeksk trprfvkqdq vciarlrtag
      601 ticletfkdf pqmgrftlrd egktiaigkv lklvpekd
//
LOCUS       XP_061008838             637 aa            linear   MAM 02-DEC-2023
DEFINITION  eukaryotic peptide chain release factor GTP-binding subunit ERF3A
            isoform X2 [Dama dama].
ACCESSION   XP_061008838
VERSION     XP_061008838.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152855.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..637
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..637
                     /product="eukaryotic peptide chain release factor
                     GTP-binding subunit ERF3A isoform X2"
                     /calculated_mol_wt=68573
     Region          64..80
                     /region_name="PAM2"
                     /note="Ataxin-2 C-terminal region; pfam07145"
                     /db_xref="CDD:429316"
     Region          207..636
                     /region_name="TEF1"
                     /note="Translation elongation factor EF-1alpha (GTPase)
                     [Translation, ribosomal structure and biogenesis];
                     COG5256"
                     /db_xref="CDD:444074"
     CDS             1..637
                     /gene="GSPT1"
                     /coded_by="XM_061152855.1:289..2202"
                     /db_xref="GeneID:133063457"
ORIGIN      
        1 mdpgsggggg ggggggssss sdsapdcwdq admeapgpgp cggaggplaa aaaeaqrehl
       61 saafsrqlnv nakpfvpnvh aaefvpsflr gpaqspaspa gaaannhgag sgaggpsapv
      121 essqeeqsll cegsnsavsm elsepienge temspeeswe hkeeiseaep dggslgdgrp
      181 teegaqemme eeeeipkpks vvappgapkk ehvnvvfigh vdagkstigg qimyltgmvd
      241 krtlekyere akeknretwy lswaldtnqe erdkgktvev grayfetdkk hftildapgh
      301 ksfvpnmigg asqadlavlv isarkgefet gfekggqtre hamlaktagv khlivlinkm
      361 ddptvnwsne ryeeckeklv pflkkvgfnp kkdihfmpcs gltganlkeq sdfcpwyigl
      421 pfipyldnlp nfnrsvdgpi rlpivdkykd mgtvvlgkle sgsickgqql vmmpnkhnve
      481 vlgilsddve tdsvapgenl kirlkgieee eilpgfilcd pnnlchsgrt fdaqiviieh
      541 ksiicpgyna vlhihtciee veitaliclv dkksgekskt rprfvkqdqv ciarlrtagt
      601 icletfkdfp qmgrftlrde gktiaigkvl klvpekd
//
LOCUS       XP_061008840             499 aa            linear   MAM 02-DEC-2023
DEFINITION  eukaryotic peptide chain release factor GTP-binding subunit ERF3A
            isoform X3 [Dama dama].
ACCESSION   XP_061008840
VERSION     XP_061008840.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152857.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..499
                     /product="eukaryotic peptide chain release factor
                     GTP-binding subunit ERF3A isoform X3"
                     /calculated_mol_wt=55620
     Region          69..498
                     /region_name="TEF1"
                     /note="Translation elongation factor EF-1alpha (GTPase)
                     [Translation, ribosomal structure and biogenesis];
                     COG5256"
                     /db_xref="CDD:444074"
     CDS             1..499
                     /gene="GSPT1"
                     /coded_by="XM_061152857.1:103..1602"
                     /db_xref="GeneID:133063457"
ORIGIN      
        1 melsepiven getemspees wehkeeisea epdggslgdg rpteegaqem meeeeeipkp
       61 ksvvappgap kkehvnvvfi ghvdagksti ggqimyltgm vdkrtlekye reakeknret
      121 wylswaldtn qeerdkgktv evgrayfetd kkhftildap ghksfvpnmi ggasqadlav
      181 lvisarkgef etgfekggqt rehamlakta gvkhlivlin kmddptvnws neryeeckek
      241 lvpflkkvgf npkkdihfmp csgltganlk eqsdfcpwyi glpfipyldn lpnfnrsvdg
      301 pirlpivdky kdmgtvvlgk lesgsickgq qlvmmpnkhn vevlgilsdd vetdsvapge
      361 nlkirlkgie eeeilpgfil cdpnnlchsg rtfdaqivii ehksiicpgy navlhihtci
      421 eeveitalic lvdkksgeks ktrprfvkqd qvciarlrta gticletfkd fpqmgrftlr
      481 degktiaigk vlklvpekd
//
LOCUS       XP_061008841             482 aa            linear   MAM 02-DEC-2023
DEFINITION  ribosomal L1 domain-containing protein 1 [Dama dama].
ACCESSION   XP_061008841
VERSION     XP_061008841.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152858.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..482
                     /product="ribosomal L1 domain-containing protein 1"
                     /calculated_mol_wt=52864
     Region          41..257
                     /region_name="Ribosomal_L1"
                     /note="Ribosomal protein L1p/L10e family; pfam00687"
                     /db_xref="CDD:459905"
     Region          <313..479
                     /region_name="PLN03237"
                     /note="DNA topoisomerase 2; Provisional"
                     /db_xref="CDD:215641"
     CDS             1..482
                     /gene="RSL1D1"
                     /coded_by="XM_061152858.1:77..1525"
                     /db_xref="GeneID:133063458"
ORIGIN      
        1 measastpps tstetsvstp etpagpeqld keqvkkavea llahsrsrkn anglllnene
       61 nfflmvvlwk ipskelrvrl slphgirsdl advclftkde pnlsseqter fykkllnkhg
      121 iktisqiipl rtlkkeykay eaklrllgsf dffitdarir rllpshlgrh fynrkkvpvs
      181 vnlqsktlsr eindciggtv lnisksgscs tirightgmp tehivenvva vaerlsqklp
      241 ekwesvkllf vktersvslp vfssfvscqg eaqglhardl lkkvskksrk kksralkrqq
      301 ekkekkllkq agkakpaptt dtvapktgga paqdpapqke tggvsalpka qddsedeipl
      361 lvplketpaa gstkiqkaaa gkkslkkspg pstargkkrk aspaletpva aetktpgkgp
      421 gkkarvkeev ekernsslgk kdprqtpkkp eakffttask sakkaprtlt qrpkkpkvrq
      481 st
//
LOCUS       XP_061008842             817 aa            linear   MAM 02-DEC-2023
DEFINITION  sorting nexin-29 isoform X1 [Dama dama].
ACCESSION   XP_061008842
VERSION     XP_061008842.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152859.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..817
                     /product="sorting nexin-29 isoform X1"
                     /calculated_mol_wt=91273
     Region          17..179
                     /region_name="RUN_SNX29"
                     /note="RUN domain found in sorting nexin-29 (SNX29) and
                     similar proteins; cd17689"
                     /db_xref="CDD:439051"
     Region          468..633
                     /region_name="COG1340"
                     /note="Uncharacterized coiled-coil protein, contains
                     DUF342 domain [Function unknown]"
                     /db_xref="CDD:440951"
     Region          660..777
                     /region_name="PX_RUN"
                     /note="The phosphoinositide binding Phox Homology domain
                     of uncharacterized proteins containing PX and RUN domains;
                     cd07277"
                     /db_xref="CDD:132810"
     Site            order(696..698,722..723,736)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132810"
     CDS             1..817
                     /gene="SNX29"
                     /coded_by="XM_061152859.1:78..2531"
                     /db_xref="GeneID:133063460"
ORIGIN      
        1 msgtqnndmk rqfllerlld avkqcqirfg grkeiasdsd srvtclcaqf eavlqhglkr
       61 srglaltaaa ikqaagfask tetepvfwfy vkevlskhel qrfyalrhia sdvgrgrawl
      121 rcalnensle rylhmlladr grlstfyedw afvmdeerss mlptmaagln silfainidn
      181 kdlngqskfa ptvsdllkes tqnvtsllke stqgvsslfr eitassavsi lsraeqetdp
      241 lpvvskhvsa dakckrerkk kkkvtniisf ddeedeqspg dvfkkipgag esseensdrs
      301 sinimsafes pfgpnsngsq gsnswkidsl slngefgyqk ldvksidded vdeneddvyg
      361 stpgrkrpgh sespekprdg gaclsqmhgw aplqvlhgha evlfpvsgvg sygpadaplg
      421 slengtgped hilpepgpry sveasppgqe splssllpsa svpesmtvse lrqaivammn
      481 rkdeleeenr slrnlldsem ehsaalrqev dslkrkvaeq edrhvtkvqa larenevlkv
      541 qlkkyvgavq mlkregqtae vvpnlwnvdg evtvpeqkpg evaeelassy erklievaem
      601 hgeliefner lhralvakea lvsqmrqeli dlrgpvpgdl sqtsedqsls dfeisnrali
      661 nvwipsvflr gkaanafhvy qvyirikdde wnvyrryaef rslhhklqnk ypqvrafnfp
      721 pkkaignkda kfveerrkql qtylrsvmnk viqavpefta spqketltql mpffvditpp
      781 gealtnnsrp kvasrfpkls rghpretrnv epqsgdl
//
LOCUS       XP_061008843             809 aa            linear   MAM 02-DEC-2023
DEFINITION  sorting nexin-29 isoform X2 [Dama dama].
ACCESSION   XP_061008843
VERSION     XP_061008843.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152860.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..809
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..809
                     /product="sorting nexin-29 isoform X2"
                     /calculated_mol_wt=90425
     Region          9..171
                     /region_name="RUN_SNX29"
                     /note="RUN domain found in sorting nexin-29 (SNX29) and
                     similar proteins; cd17689"
                     /db_xref="CDD:439051"
     Region          460..625
                     /region_name="COG1340"
                     /note="Uncharacterized coiled-coil protein, contains
                     DUF342 domain [Function unknown]"
                     /db_xref="CDD:440951"
     Region          652..769
                     /region_name="PX_RUN"
                     /note="The phosphoinositide binding Phox Homology domain
                     of uncharacterized proteins containing PX and RUN domains;
                     cd07277"
                     /db_xref="CDD:132810"
     Site            order(688..690,714..715,728)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132810"
     CDS             1..809
                     /gene="SNX29"
                     /coded_by="XM_061152860.1:55..2484"
                     /db_xref="GeneID:133063460"
ORIGIN      
        1 mkrqfllerl ldavkqcqir fggrkeiasd sdsrvtclca qfeavlqhgl krsrglalta
       61 aaikqaagfa sktetepvfw fyvkevlskh elqrfyalrh iasdvgrgra wlrcalnens
      121 lerylhmlla drgrlstfye dwafvmdeer ssmlptmaag lnsilfaini dnkdlngqsk
      181 faptvsdllk estqnvtsll kestqgvssl freitassav silsraeqet dplpvvskhv
      241 sadakckrer kkkkkvtnii sfddeedeqs pgdvfkkipg agesseensd rssinimsaf
      301 espfgpnsng sqgsnswkid slslngefgy qkldvksidd edvdeneddv ygstpgrkrp
      361 ghsespekpr dggaclsqmh gwaplqvlhg haevlfpvsg vgsygpadap lgslengtgp
      421 edhilpepgp rysveasppg qesplssllp sasvpesmtv selrqaivam mnrkdeleee
      481 nrslrnllds emehsaalrq evdslkrkva eqedrhvtkv qalarenevl kvqlkkyvga
      541 vqmlkregqt aevvpnlwnv dgevtvpeqk pgevaeelas syerklieva emhgeliefn
      601 erlhralvak ealvsqmrqe lidlrgpvpg dlsqtsedqs lsdfeisnra linvwipsvf
      661 lrgkaanafh vyqvyirikd dewnvyrrya efrslhhklq nkypqvrafn fppkkaignk
      721 dakfveerrk qlqtylrsvm nkviqavpef taspqketlt qlmpffvdit ppgealtnns
      781 rpkvasrfpk lsrghpretr nvepqsgdl
//
LOCUS       XP_061008844             683 aa            linear   MAM 02-DEC-2023
DEFINITION  sorting nexin-29 isoform X3 [Dama dama].
ACCESSION   XP_061008844
VERSION     XP_061008844.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152861.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..683
                     /product="sorting nexin-29 isoform X3"
                     /calculated_mol_wt=76017
     Region          <1..45
                     /region_name="RUN"
                     /note="RUN domain; cl45896"
                     /db_xref="CDD:459241"
     Region          334..499
                     /region_name="COG1340"
                     /note="Uncharacterized coiled-coil protein, contains
                     DUF342 domain [Function unknown]"
                     /db_xref="CDD:440951"
     Region          526..643
                     /region_name="PX_RUN"
                     /note="The phosphoinositide binding Phox Homology domain
                     of uncharacterized proteins containing PX and RUN domains;
                     cd07277"
                     /db_xref="CDD:132810"
     Site            order(562..564,588..589,602)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132810"
     CDS             1..683
                     /gene="SNX29"
                     /coded_by="XM_061152861.1:292..2343"
                     /db_xref="GeneID:133063460"
ORIGIN      
        1 mlladrgrls tfyedwafvm deerssmlpt maaglnsilf ainidnkdln gqskfaptvs
       61 dllkestqnv tsllkestqg vsslfreita ssavsilsra eqetdplpvv skhvsadakc
      121 krerkkkkkv tniisfddee deqspgdvfk kipgagesse ensdrssini msafespfgp
      181 nsngsqgsns wkidslslng efgyqkldvk siddedvden eddvygstpg rkrpghsesp
      241 ekprdggacl sqmhgwaplq vlhghaevlf pvsgvgsygp adaplgslen gtgpedhilp
      301 epgprysvea sppgqespls sllpsasvpe smtvselrqa ivammnrkde leeenrslrn
      361 lldsemehsa alrqevdslk rkvaeqedrh vtkvqalare nevlkvqlkk yvgavqmlkr
      421 egqtaevvpn lwnvdgevtv peqkpgevae elassyerkl ievaemhgel iefnerlhra
      481 lvakealvsq mrqelidlrg pvpgdlsqts edqslsdfei snralinvwi psvflrgkaa
      541 nafhvyqvyi rikddewnvy rryaefrslh hklqnkypqv rafnfppkka ignkdakfve
      601 errkqlqtyl rsvmnkviqa vpeftaspqk etltqlmpff vditppgeal tnnsrpkvas
      661 rfpklsrghp retrnvepqs gdl
//
LOCUS       XP_061008846             313 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein phosphatase CPPED1 [Dama dama].
ACCESSION   XP_061008846
VERSION     XP_061008846.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152863.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..313
                     /product="serine/threonine-protein phosphatase CPPED1"
                     /calculated_mol_wt=35269
     Region          29..294
                     /region_name="MPP_CSTP1"
                     /note="Homo sapiens CSTP1 and related proteins,
                     metallophosphatase domain; cd07395"
                     /db_xref="CDD:277340"
     Site            order(40,42,90,127..128,205,246,248)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:277340"
     Site            order(40,42,90,127,205,246,248)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:277340"
     CDS             1..313
                     /gene="CPPED1"
                     /coded_by="XM_061152863.1:179..1120"
                     /db_xref="GeneID:133063462"
ORIGIN      
        1 msaaeaggvf hrargrtlda fssekerewk gpfyfiqgad pqfglmkawa tgdcdnggde
       61 weqeirlaeq avqainklnp kpkffvlcgd lvhampgrpw rkeqtedlqr vlrtvdsdip
      121 lvlvsgnhdv gnaptpetia efqrtwgddy fsfwvggvlf lvlnsqflyd asrcpalkqe
      181 hdrwleqqlr tagqracrha vvfqhiplfl qsigedddyf nltksvrkem adkfveagvk
      241 avfsghyhrn aggtyrnldm vvssaigcql gkdahglrvv mvtaekivhr yysldelsek
      301 gieddlmdll ken
//
LOCUS       XP_061008847             916 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA repair endonuclease XPF isoform X1 [Dama dama].
ACCESSION   XP_061008847
VERSION     XP_061008847.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152864.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..916
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..916
                     /product="DNA repair endonuclease XPF isoform X1"
                     /calculated_mol_wt=103929
     Region          97..907
                     /region_name="rad1"
                     /note="DNA repair protein (rad1); TIGR00596"
                     /db_xref="CDD:273163"
     CDS             1..916
                     /gene="ERCC4"
                     /coded_by="XM_061152864.1:23..2773"
                     /db_xref="GeneID:133063463"
ORIGIN      
        1 mepgsparat amaplleyer qlvlelldad glvvcarglg adrllyhflr lhchpaclvl
       61 vlntqpaeee yfinqlkieg vehlprrvtn eitssnryev ytqggvifat srilvvdflt
      121 dripsdlitg ilvyrahrii escqeafilr lfrqknkrgf ikaftdnava fdtgfchver
      181 vmrnlfvrkl ylwprfhvav nsflelhkpe vveihvsmtp amlaiqtail dilnaclkel
      241 kchnpsleve dlslenaigk pfdktirhyl dplwhqlgak tkslvqdlki lrtllqylsq
      301 ydcitflnll eslratekaf gqnsgwlfld sstsmfvnar arvyhvpdak mskkikvpek
      361 leikeeqetk kelvlesnpk waaltevlke ieaenkesev lggpgqvlic asddrtcsql
      421 reyltvgaev fllrlyrktf ekdskaedvw mrlrkeddsk rimksnkrpk dlrdkdrppa
      481 kekalrkkkp rltltqmvgr teelegeagv eegsprelts slesctgdsk heesdvnvss
      541 daaygilkdp ltiihpllgc sdpyaltrvl hevepryvvl ydaeltfvrq leiyrasrpg
      601 kplrvyfliy ggsteeqryl talrkekeaf eklirekasm vipeeregrd etnldlvrgc
      661 vsasaptdtr kaggqeqngt qqsivvdmre frselpslih rrgidiepvt levgdyiltp
      721 emcverksis dligslnngr lysqcismsr yykrpvllie fdptkpfslm srgalyqeis
      781 gndvsskltl ltlhfprlri lwcpsphata elfealkqnk pqpdastama vtadsetlpe
      841 aekynpgpqd fllkmpgina kncrslmnhv kniaelaslp fdqlasllgn tgsarqlydf
      901 ihtsyaevls rgrvrk
//
LOCUS       XP_061008848             879 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA repair endonuclease XPF isoform X2 [Dama dama].
ACCESSION   XP_061008848
VERSION     XP_061008848.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152865.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..879
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..879
                     /product="DNA repair endonuclease XPF isoform X2"
                     /calculated_mol_wt=99837
     Region          97..870
                     /region_name="rad1"
                     /note="DNA repair protein (rad1); TIGR00596"
                     /db_xref="CDD:273163"
     CDS             1..879
                     /gene="ERCC4"
                     /coded_by="XM_061152865.1:23..2662"
                     /db_xref="GeneID:133063463"
ORIGIN      
        1 mepgsparat amaplleyer qlvlelldad glvvcarglg adrllyhflr lhchpaclvl
       61 vlntqpaeee yfinqlkieg vehlprrvtn eitssnryev ytqggvifat srilvvdflt
      121 dripsdlitg ilvyrahrii escqeafilr lfrqknkrgf ikaftdnava fdtgfchver
      181 vmrnlfvrkl ylwprfhvav nsflelhkpe vveihvsmtp amlaiqtail dilnaclkel
      241 kchnpsleve dlslenaigk pfdktirhyl dplwhqlgak tkslvqdlki lrtllqylsq
      301 ydcitflnll eslratekaf gqnsgwlfld sstsmfvnar arvyhvpdak mskkikvpek
      361 leikeeqgqv licasddrtc sqlreyltvg aevfllrlyr ktfekdskae dvwmrlrked
      421 dskrimksnk rpkdlrdkdr ppakekalrk kkprltltqm vgrteelege agveegspre
      481 ltsslesctg dskheesdvn vssdaaygil kdpltiihpl lgcsdpyalt rvlhevepry
      541 vvlydaeltf vrqleiyras rpgkplrvyf liyggsteeq ryltalrkek eafeklirek
      601 asmvipeere grdetnldlv rgcvsasapt dtrkaggqeq ngtqqsivvd mrefrselps
      661 lihrrgidie pvtlevgdyi ltpemcverk sisdligsln ngrlysqcis msryykrpvl
      721 liefdptkpf slmsrgalyq eisgndvssk ltlltlhfpr lrilwcpsph ataelfealk
      781 qnkpqpdast amavtadset lpeaekynpg pqdfllkmpg inakncrslm nhvkniaela
      841 slpfdqlasl lgntgsarql ydfihtsyae vlsrgrvrk
//
LOCUS       XP_061008849            1124 aa            linear   MAM 02-DEC-2023
DEFINITION  myocardin-related transcription factor B isoform X1 [Dama dama].
ACCESSION   XP_061008849
VERSION     XP_061008849.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152866.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1124
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1124
                     /product="myocardin-related transcription factor B isoform
                     X1"
                     /calculated_mol_wt=121494
     Region          104..128
                     /region_name="RPEL"
                     /note="RPEL repeat; cl29414"
                     /db_xref="CDD:475195"
     Region          148..171
                     /region_name="RPEL"
                     /note="RPEL repeat; pfam02755"
                     /db_xref="CDD:460677"
     Region          191..216
                     /region_name="RPEL"
                     /note="Repeat in Drosophila CG10860, human KIAA0680 and C.
                     elegans F26H9.2; smart00707"
                     /db_xref="CDD:128947"
     Region          <263..462
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          451..484
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     Region          619..>654
                     /region_name="DUF2130"
                     /note="Uncharacterized protein conserved in bacteria
                     (DUF2130); pfam09903"
                     /db_xref="CDD:430914"
     Region          <664..980
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1124
                     /gene="MRTFB"
                     /coded_by="XM_061152866.1:78..3452"
                     /db_xref="GeneID:133063464"
ORIGIN      
        1 mcfdqlwryk agnlinqvlf vngtdwkftl ksleqttfkr rlipaaasgr dtmdhtgald
       61 tedelgplah lapspqseav ahefqelslq ssqhlpplne rknvlqlrlq qrrtreqlvd
      121 qgimpplksp aafheqiksl erartenflk hkirsrpdrs elvrmhilee tfaepslqat
      181 qmklkrarla ddlnekiaqr pgpmelvekn ilpvdssvke aiigvgkedy pqtqgdfsfd
      241 edssdalspd qpasqesqgs aaspsepkvs espspvttnt paqftpvspa vpeflktpta
      301 dqppprstap vlppsttssa kpgpalvkqs hpknpndkhr skkckdpkpr vkklkyhqyi
      361 ppdqkgerne pqmdsnyarl lqqqqlflql qilsqqqqhy nyqtilpapl kplndknsss
      421 gnpalnttts ntprqntpap vrkpgplpss lddlkvselk telklrglpv sgtkldlier
      481 lkpyqevnsg gpaasgiiav ptpavvpsnp evtvalpvtt lqnsvtssgs tfkadlppag
      541 gssaahvdsg ssplpispap seqsslsaed tsmadtftei mtmmspsqfl cssplratst
      601 edslsptsst lstleldaae kdrklqekek qieelkrkle qeqklvevlk mqlevekrgq
      661 qqqrpleppa psvskadptr attasttkde aplpdgpgpv agqtlvakka vvikqevpva
      721 paeppslvpq fyvssqgqpp agvaqpqall ttqtaqlllp vsiqgsgvts vqlpvgslql
      781 qtppqtgiqt qpqiatatls sglaqaapqk qdafpahvls qpqqvrkvft ssasstvlpy
      841 qrppapavqq pfinkannsi lqprstplps lqngpsppnk pgsppppqqf vvqhslfgsp
      901 vpktkdppry eeaikqtrsa qsslpeisna hsqqmddlfd iliksgeisl pikeepspis
      961 kmrpvtasit tmpvstvvsr pppqvqmapp islepmssls aslenqleaf ldgtlpsane
     1021 vtplqsgsed repfsliedl qndllshsgv ldpshspmet aeaqfaastp clsldlsdsn
     1081 ldnmewldit mpgtssgltp lsattpsmfs adfldpqdlp lpwd
//
LOCUS       XP_061008850            1094 aa            linear   MAM 02-DEC-2023
DEFINITION  myocardin-related transcription factor B isoform X2 [Dama dama].
ACCESSION   XP_061008850
VERSION     XP_061008850.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152867.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1094
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1094
                     /product="myocardin-related transcription factor B isoform
                     X2"
                     /calculated_mol_wt=117892
     Region          74..98
                     /region_name="RPEL"
                     /note="RPEL repeat; cl29414"
                     /db_xref="CDD:475195"
     Region          118..141
                     /region_name="RPEL"
                     /note="RPEL repeat; pfam02755"
                     /db_xref="CDD:460677"
     Region          161..186
                     /region_name="RPEL"
                     /note="Repeat in Drosophila CG10860, human KIAA0680 and C.
                     elegans F26H9.2; smart00707"
                     /db_xref="CDD:128947"
     Region          <233..432
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          421..454
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     Region          589..>624
                     /region_name="DUF2130"
                     /note="Uncharacterized protein conserved in bacteria
                     (DUF2130); pfam09903"
                     /db_xref="CDD:430914"
     Region          <634..950
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1094
                     /gene="MRTFB"
                     /coded_by="XM_061152867.1:98..3382"
                     /db_xref="GeneID:133063464"
ORIGIN      
        1 msleqttfkr rlipaaasgr dtmdhtgald tedelgplah lapspqseav ahefqelslq
       61 ssqhlpplne rknvlqlrlq qrrtreqlvd qgimpplksp aafheqiksl erartenflk
      121 hkirsrpdrs elvrmhilee tfaepslqat qmklkrarla ddlnekiaqr pgpmelvekn
      181 ilpvdssvke aiigvgkedy pqtqgdfsfd edssdalspd qpasqesqgs aaspsepkvs
      241 espspvttnt paqftpvspa vpeflktpta dqppprstap vlppsttssa kpgpalvkqs
      301 hpknpndkhr skkckdpkpr vkklkyhqyi ppdqkgerne pqmdsnyarl lqqqqlflql
      361 qilsqqqqhy nyqtilpapl kplndknsss gnpalnttts ntprqntpap vrkpgplpss
      421 lddlkvselk telklrglpv sgtkldlier lkpyqevnsg gpaasgiiav ptpavvpsnp
      481 evtvalpvtt lqnsvtssgs tfkadlppag gssaahvdsg ssplpispap seqsslsaed
      541 tsmadtftei mtmmspsqfl cssplratst edslsptsst lstleldaae kdrklqekek
      601 qieelkrkle qeqklvevlk mqlevekrgq qqqrpleppa psvskadptr attasttkde
      661 aplpdgpgpv agqtlvakka vvikqevpva paeppslvpq fyvssqgqpp agvaqpqall
      721 ttqtaqlllp vsiqgsgvts vqlpvgslql qtppqtgiqt qpqiatatls sglaqaapqk
      781 qdafpahvls qpqqvrkvft ssasstvlpy qrppapavqq pfinkannsi lqprstplps
      841 lqngpsppnk pgsppppqqf vvqhslfgsp vpktkdppry eeaikqtrsa qsslpeisna
      901 hsqqmddlfd iliksgeisl pikeepspis kmrpvtasit tmpvstvvsr pppqvqmapp
      961 islepmssls aslenqleaf ldgtlpsane vtplqsgsed repfsliedl qndllshsgv
     1021 ldpshspmet aeaqfaastp clsldlsdsn ldnmewldit mpgtssgltp lsattpsmfs
     1081 adfldpqdlp lpwd
//
LOCUS       XP_061008851            1075 aa            linear   MAM 02-DEC-2023
DEFINITION  myocardin-related transcription factor B isoform X3 [Dama dama].
ACCESSION   XP_061008851
VERSION     XP_061008851.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152868.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1075
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1075
                     /product="myocardin-related transcription factor B isoform
                     X3"
                     /calculated_mol_wt=116617
     Region          104..128
                     /region_name="RPEL"
                     /note="RPEL repeat; cl29414"
                     /db_xref="CDD:475195"
     Region          148..171
                     /region_name="RPEL"
                     /note="RPEL repeat; pfam02755"
                     /db_xref="CDD:460677"
     Region          191..216
                     /region_name="RPEL"
                     /note="Repeat in Drosophila CG10860, human KIAA0680 and C.
                     elegans F26H9.2; smart00707"
                     /db_xref="CDD:128947"
     Region          <243..738
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <263..462
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          451..484
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     Region          <670..941
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     CDS             1..1075
                     /gene="MRTFB"
                     /coded_by="XM_061152868.1:79..3306"
                     /db_xref="GeneID:133063464"
ORIGIN      
        1 mcfdqlwryk agnlinqvlf vngtdwkftl ksleqttfkr rlipaaasgr dtmdhtgald
       61 tedelgplah lapspqseav ahefqelslq ssqhlpplne rknvlqlrlq qrrtreqlvd
      121 qgimpplksp aafheqiksl erartenflk hkirsrpdrs elvrmhilee tfaepslqat
      181 qmklkrarla ddlnekiaqr pgpmelvekn ilpvdssvke aiigvgkedy pqtqgdfsfd
      241 edssdalspd qpasqesqgs aaspsepkvs espspvttnt paqftpvspa vpeflktpta
      301 dqppprstap vlppsttssa kpgpalvkqs hpknpndkhr skkckdpkpr vkklkyhqyi
      361 ppdqkgerne pqmdsnyarl lqqqqlflql qilsqqqqhy nyqtilpapl kplndknsss
      421 gnpalnttts ntprqntpap vrkpgplpss lddlkvselk telklrglpv sgtkldlier
      481 lkpyqevnsg gpaasgiiav ptpavvpsnp evtvalpvtt lqnsvtssgs tfkadlppag
      541 gssaahvdsg ssplpispap seqsslsaed tsmadtftei mtmmspsqfl cssplratst
      601 edslsptsst lstleldaae kdrklqekek qieelkrkle qeqklvevlk mqlevekrgq
      661 qqqrpleppa psvskadptr attasttkde aplpdgpgpv agqtlvakka vvikqevpva
      721 paeppslvpq fytppqtgiq tqpqiatatl ssglaqaapq kqdafpahvl sqpqqvrkvf
      781 tssasstvlp yqrppapavq qpfinkanns ilqprstplp slqngpsppn kpgsppppqq
      841 fvvqhslfgs pvpktkdppr yeeaikqtrs aqsslpeisn ahsqqmddlf diliksgeis
      901 lpikeepspi skmrpvtasi ttmpvstvvs rpppqvqmap pislepmssl saslenqlea
      961 fldgtlpsan evtplqsgse drepfslied lqndllshsg vldpshspme taeaqfaast
     1021 pclsldlsds nldnmewldi tmpgtssglt plsattpsmf sadfldpqdl plpwd
//
LOCUS       XP_061008852            1072 aa            linear   MAM 02-DEC-2023
DEFINITION  myocardin-related transcription factor B isoform X4 [Dama dama].
ACCESSION   XP_061008852
VERSION     XP_061008852.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152869.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1072
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1072
                     /product="myocardin-related transcription factor B isoform
                     X4"
                     /calculated_mol_wt=115461
     Region          52..76
                     /region_name="RPEL"
                     /note="RPEL repeat; cl29414"
                     /db_xref="CDD:475195"
     Region          96..119
                     /region_name="RPEL"
                     /note="RPEL repeat; pfam02755"
                     /db_xref="CDD:460677"
     Region          139..164
                     /region_name="RPEL"
                     /note="Repeat in Drosophila CG10860, human KIAA0680 and C.
                     elegans F26H9.2; smart00707"
                     /db_xref="CDD:128947"
     Region          <211..410
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          399..432
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     Region          567..>602
                     /region_name="DUF2130"
                     /note="Uncharacterized protein conserved in bacteria
                     (DUF2130); pfam09903"
                     /db_xref="CDD:430914"
     Region          <612..928
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1072
                     /gene="MRTFB"
                     /coded_by="XM_061152869.1:200..3418"
                     /db_xref="GeneID:133063464"
ORIGIN      
        1 mdhtgaldte delgplahla pspqseavah efqelslqss qhlpplnerk nvlqlrlqqr
       61 rtreqlvdqg impplkspaa fheqiksler artenflkhk irsrpdrsel vrmhileetf
      121 aepslqatqm klkrarladd lnekiaqrpg pmelveknil pvdssvkeai igvgkedypq
      181 tqgdfsfded ssdalspdqp asqesqgsaa spsepkvses pspvttntpa qftpvspavp
      241 eflktptadq ppprstapvl ppsttssakp gpalvkqshp knpndkhrsk kckdpkprvk
      301 klkyhqyipp dqkgernepq mdsnyarllq qqqlflqlqi lsqqqqhyny qtilpaplkp
      361 lndknsssgn palntttsnt prqntpapvr kpgplpssld dlkvselkte lklrglpvsg
      421 tkldlierlk pyqevnsggp aasgiiavpt pavvpsnpev tvalpvttlq nsvtssgstf
      481 kadlppaggs saahvdsgss plpispapse qsslsaedts madtfteimt mmspsqflcs
      541 splratsted slsptsstls tleldaaekd rklqekekqi eelkrkleqe qklvevlkmq
      601 levekrgqqq qrpleppaps vskadptrat tasttkdeap lpdgpgpvag qtlvakkavv
      661 ikqevpvapa eppslvpqfy vssqgqppag vaqpqalltt qtaqlllpvs iqgsgvtsvq
      721 lpvgslqlqt ppqtgiqtqp qiatatlssg laqaapqkqd afpahvlsqp qqvrkvftss
      781 asstvlpyqr ppapavqqpf inkannsilq prstplpslq ngpsppnkpg sppppqqfvv
      841 qhslfgspvp ktkdppryee aikqtrsaqs slpeisnahs qqmddlfdil iksgeislpi
      901 keepspiskm rpvtasittm pvstvvsrpp pqvqmappis lepmsslsas lenqleafld
      961 gtlpsanevt plqsgsedre pfsliedlqn dllshsgvld pshspmetae aqfaastpcl
     1021 sldlsdsnld nmewlditmp gtssgltpls attpsmfsad fldpqdlplp wd
//
LOCUS       XP_061008853            1072 aa            linear   MAM 02-DEC-2023
DEFINITION  myocardin-related transcription factor B isoform X4 [Dama dama].
ACCESSION   XP_061008853
VERSION     XP_061008853.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152870.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1072
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1072
                     /product="myocardin-related transcription factor B isoform
                     X4"
                     /calculated_mol_wt=115461
     Region          52..76
                     /region_name="RPEL"
                     /note="RPEL repeat; cl29414"
                     /db_xref="CDD:475195"
     Region          96..119
                     /region_name="RPEL"
                     /note="RPEL repeat; pfam02755"
                     /db_xref="CDD:460677"
     Region          139..164
                     /region_name="RPEL"
                     /note="Repeat in Drosophila CG10860, human KIAA0680 and C.
                     elegans F26H9.2; smart00707"
                     /db_xref="CDD:128947"
     Region          <211..410
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          399..432
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     Region          567..>602
                     /region_name="DUF2130"
                     /note="Uncharacterized protein conserved in bacteria
                     (DUF2130); pfam09903"
                     /db_xref="CDD:430914"
     Region          <612..928
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1072
                     /gene="MRTFB"
                     /coded_by="XM_061152870.1:174..3392"
                     /db_xref="GeneID:133063464"
ORIGIN      
        1 mdhtgaldte delgplahla pspqseavah efqelslqss qhlpplnerk nvlqlrlqqr
       61 rtreqlvdqg impplkspaa fheqiksler artenflkhk irsrpdrsel vrmhileetf
      121 aepslqatqm klkrarladd lnekiaqrpg pmelveknil pvdssvkeai igvgkedypq
      181 tqgdfsfded ssdalspdqp asqesqgsaa spsepkvses pspvttntpa qftpvspavp
      241 eflktptadq ppprstapvl ppsttssakp gpalvkqshp knpndkhrsk kckdpkprvk
      301 klkyhqyipp dqkgernepq mdsnyarllq qqqlflqlqi lsqqqqhyny qtilpaplkp
      361 lndknsssgn palntttsnt prqntpapvr kpgplpssld dlkvselkte lklrglpvsg
      421 tkldlierlk pyqevnsggp aasgiiavpt pavvpsnpev tvalpvttlq nsvtssgstf
      481 kadlppaggs saahvdsgss plpispapse qsslsaedts madtfteimt mmspsqflcs
      541 splratsted slsptsstls tleldaaekd rklqekekqi eelkrkleqe qklvevlkmq
      601 levekrgqqq qrpleppaps vskadptrat tasttkdeap lpdgpgpvag qtlvakkavv
      661 ikqevpvapa eppslvpqfy vssqgqppag vaqpqalltt qtaqlllpvs iqgsgvtsvq
      721 lpvgslqlqt ppqtgiqtqp qiatatlssg laqaapqkqd afpahvlsqp qqvrkvftss
      781 asstvlpyqr ppapavqqpf inkannsilq prstplpslq ngpsppnkpg sppppqqfvv
      841 qhslfgspvp ktkdppryee aikqtrsaqs slpeisnahs qqmddlfdil iksgeislpi
      901 keepspiskm rpvtasittm pvstvvsrpp pqvqmappis lepmsslsas lenqleafld
      961 gtlpsanevt plqsgsedre pfsliedlqn dllshsgvld pshspmetae aqfaastpcl
     1021 sldlsdsnld nmewlditmp gtssgltpls attpsmfsad fldpqdlplp wd
//
LOCUS       XP_061008854            1072 aa            linear   MAM 02-DEC-2023
DEFINITION  myocardin-related transcription factor B isoform X4 [Dama dama].
ACCESSION   XP_061008854
VERSION     XP_061008854.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152871.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1072
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1072
                     /product="myocardin-related transcription factor B isoform
                     X4"
                     /calculated_mol_wt=115461
     Region          52..76
                     /region_name="RPEL"
                     /note="RPEL repeat; cl29414"
                     /db_xref="CDD:475195"
     Region          96..119
                     /region_name="RPEL"
                     /note="RPEL repeat; pfam02755"
                     /db_xref="CDD:460677"
     Region          139..164
                     /region_name="RPEL"
                     /note="Repeat in Drosophila CG10860, human KIAA0680 and C.
                     elegans F26H9.2; smart00707"
                     /db_xref="CDD:128947"
     Region          <211..410
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          399..432
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     Region          567..>602
                     /region_name="DUF2130"
                     /note="Uncharacterized protein conserved in bacteria
                     (DUF2130); pfam09903"
                     /db_xref="CDD:430914"
     Region          <612..928
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1072
                     /gene="MRTFB"
                     /coded_by="XM_061152871.1:169..3387"
                     /db_xref="GeneID:133063464"
ORIGIN      
        1 mdhtgaldte delgplahla pspqseavah efqelslqss qhlpplnerk nvlqlrlqqr
       61 rtreqlvdqg impplkspaa fheqiksler artenflkhk irsrpdrsel vrmhileetf
      121 aepslqatqm klkrarladd lnekiaqrpg pmelveknil pvdssvkeai igvgkedypq
      181 tqgdfsfded ssdalspdqp asqesqgsaa spsepkvses pspvttntpa qftpvspavp
      241 eflktptadq ppprstapvl ppsttssakp gpalvkqshp knpndkhrsk kckdpkprvk
      301 klkyhqyipp dqkgernepq mdsnyarllq qqqlflqlqi lsqqqqhyny qtilpaplkp
      361 lndknsssgn palntttsnt prqntpapvr kpgplpssld dlkvselkte lklrglpvsg
      421 tkldlierlk pyqevnsggp aasgiiavpt pavvpsnpev tvalpvttlq nsvtssgstf
      481 kadlppaggs saahvdsgss plpispapse qsslsaedts madtfteimt mmspsqflcs
      541 splratsted slsptsstls tleldaaekd rklqekekqi eelkrkleqe qklvevlkmq
      601 levekrgqqq qrpleppaps vskadptrat tasttkdeap lpdgpgpvag qtlvakkavv
      661 ikqevpvapa eppslvpqfy vssqgqppag vaqpqalltt qtaqlllpvs iqgsgvtsvq
      721 lpvgslqlqt ppqtgiqtqp qiatatlssg laqaapqkqd afpahvlsqp qqvrkvftss
      781 asstvlpyqr ppapavqqpf inkannsilq prstplpslq ngpsppnkpg sppppqqfvv
      841 qhslfgspvp ktkdppryee aikqtrsaqs slpeisnahs qqmddlfdil iksgeislpi
      901 keepspiskm rpvtasittm pvstvvsrpp pqvqmappis lepmsslsas lenqleafld
      961 gtlpsanevt plqsgsedre pfsliedlqn dllshsgvld pshspmetae aqfaastpcl
     1021 sldlsdsnld nmewlditmp gtssgltpls attpsmfsad fldpqdlplp wd
//
LOCUS       XP_061008856            1072 aa            linear   MAM 02-DEC-2023
DEFINITION  myocardin-related transcription factor B isoform X4 [Dama dama].
ACCESSION   XP_061008856
VERSION     XP_061008856.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152873.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1072
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1072
                     /product="myocardin-related transcription factor B isoform
                     X4"
                     /calculated_mol_wt=115461
     Region          52..76
                     /region_name="RPEL"
                     /note="RPEL repeat; cl29414"
                     /db_xref="CDD:475195"
     Region          96..119
                     /region_name="RPEL"
                     /note="RPEL repeat; pfam02755"
                     /db_xref="CDD:460677"
     Region          139..164
                     /region_name="RPEL"
                     /note="Repeat in Drosophila CG10860, human KIAA0680 and C.
                     elegans F26H9.2; smart00707"
                     /db_xref="CDD:128947"
     Region          <211..410
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          399..432
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     Region          567..>602
                     /region_name="DUF2130"
                     /note="Uncharacterized protein conserved in bacteria
                     (DUF2130); pfam09903"
                     /db_xref="CDD:430914"
     Region          <612..928
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1072
                     /gene="MRTFB"
                     /coded_by="XM_061152873.1:199..3417"
                     /db_xref="GeneID:133063464"
ORIGIN      
        1 mdhtgaldte delgplahla pspqseavah efqelslqss qhlpplnerk nvlqlrlqqr
       61 rtreqlvdqg impplkspaa fheqiksler artenflkhk irsrpdrsel vrmhileetf
      121 aepslqatqm klkrarladd lnekiaqrpg pmelveknil pvdssvkeai igvgkedypq
      181 tqgdfsfded ssdalspdqp asqesqgsaa spsepkvses pspvttntpa qftpvspavp
      241 eflktptadq ppprstapvl ppsttssakp gpalvkqshp knpndkhrsk kckdpkprvk
      301 klkyhqyipp dqkgernepq mdsnyarllq qqqlflqlqi lsqqqqhyny qtilpaplkp
      361 lndknsssgn palntttsnt prqntpapvr kpgplpssld dlkvselkte lklrglpvsg
      421 tkldlierlk pyqevnsggp aasgiiavpt pavvpsnpev tvalpvttlq nsvtssgstf
      481 kadlppaggs saahvdsgss plpispapse qsslsaedts madtfteimt mmspsqflcs
      541 splratsted slsptsstls tleldaaekd rklqekekqi eelkrkleqe qklvevlkmq
      601 levekrgqqq qrpleppaps vskadptrat tasttkdeap lpdgpgpvag qtlvakkavv
      661 ikqevpvapa eppslvpqfy vssqgqppag vaqpqalltt qtaqlllpvs iqgsgvtsvq
      721 lpvgslqlqt ppqtgiqtqp qiatatlssg laqaapqkqd afpahvlsqp qqvrkvftss
      781 asstvlpyqr ppapavqqpf inkannsilq prstplpslq ngpsppnkpg sppppqqfvv
      841 qhslfgspvp ktkdppryee aikqtrsaqs slpeisnahs qqmddlfdil iksgeislpi
      901 keepspiskm rpvtasittm pvstvvsrpp pqvqmappis lepmsslsas lenqleafld
      961 gtlpsanevt plqsgsedre pfsliedlqn dllshsgvld pshspmetae aqfaastpcl
     1021 sldlsdsnld nmewlditmp gtssgltpls attpsmfsad fldpqdlplp wd
//
LOCUS       XP_061008857            1061 aa            linear   MAM 02-DEC-2023
DEFINITION  myocardin-related transcription factor B isoform X5 [Dama dama].
ACCESSION   XP_061008857
VERSION     XP_061008857.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152874.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1061
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1061
                     /product="myocardin-related transcription factor B isoform
                     X5"
                     /calculated_mol_wt=114409
     Region          40..65
                     /region_name="RPEL"
                     /note="RPEL repeat; cl29414"
                     /db_xref="CDD:475195"
     Region          85..108
                     /region_name="RPEL"
                     /note="RPEL repeat; pfam02755"
                     /db_xref="CDD:460677"
     Region          128..153
                     /region_name="RPEL"
                     /note="Repeat in Drosophila CG10860, human KIAA0680 and C.
                     elegans F26H9.2; smart00707"
                     /db_xref="CDD:128947"
     Region          <200..399
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          388..421
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     Region          556..>591
                     /region_name="DUF2130"
                     /note="Uncharacterized protein conserved in bacteria
                     (DUF2130); pfam09903"
                     /db_xref="CDD:430914"
     Region          <601..917
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1061
                     /gene="MRTFB"
                     /coded_by="XM_061152874.1:221..3406"
                     /db_xref="GeneID:133063464"
ORIGIN      
        1 midsskkqqq gfpeiltagd feplkekecl egshqkslke vlqlrlqqrr treqlvdqgi
       61 mpplkspaaf heqikslera rtenflkhki rsrpdrselv rmhileetfa epslqatqmk
      121 lkrarladdl nekiaqrpgp melveknilp vdssvkeaii gvgkedypqt qgdfsfdeds
      181 sdalspdqpa sqesqgsaas psepkvsesp spvttntpaq ftpvspavpe flktptadqp
      241 pprstapvlp psttssakpg palvkqshpk npndkhrskk ckdpkprvkk lkyhqyippd
      301 qkgernepqm dsnyarllqq qqlflqlqil sqqqqhynyq tilpaplkpl ndknsssgnp
      361 alntttsntp rqntpapvrk pgplpssldd lkvselktel klrglpvsgt kldlierlkp
      421 yqevnsggpa asgiiavptp avvpsnpevt valpvttlqn svtssgstfk adlppaggss
      481 aahvdsgssp lpispapseq sslsaedtsm adtfteimtm mspsqflcss plratsteds
      541 lsptsstlst leldaaekdr klqekekqie elkrkleqeq klvevlkmql evekrgqqqq
      601 rpleppapsv skadptratt asttkdeapl pdgpgpvagq tlvakkavvi kqevpvapae
      661 ppslvpqfyv ssqgqppagv aqpqallttq taqlllpvsi qgsgvtsvql pvgslqlqtp
      721 pqtgiqtqpq iatatlssgl aqaapqkqda fpahvlsqpq qvrkvftssa sstvlpyqrp
      781 papavqqpfi nkannsilqp rstplpslqn gpsppnkpgs ppppqqfvvq hslfgspvpk
      841 tkdppryeea ikqtrsaqss lpeisnahsq qmddlfdili ksgeislpik eepspiskmr
      901 pvtasittmp vstvvsrppp qvqmappisl epmsslsasl enqleafldg tlpsanevtp
      961 lqsgsedrep fsliedlqnd llshsgvldp shspmetaea qfaastpcls ldlsdsnldn
     1021 mewlditmpg tssgltplsa ttpsmfsadf ldpqdlplpw d
//
LOCUS       XP_061008858             637 aa            linear   MAM 02-DEC-2023
DEFINITION  poly(A)-specific ribonuclease PARN isoform X1 [Dama dama].
ACCESSION   XP_061008858
VERSION     XP_061008858.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152875.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..637
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..637
                     /product="poly(A)-specific ribonuclease PARN isoform X1"
                     /calculated_mol_wt=73026
     Region          5..390
                     /region_name="CAF1"
                     /note="CAF1 family ribonuclease; pfam04857"
                     /db_xref="CDD:461457"
     Region          438..512
                     /region_name="RNA_bind"
                     /note="RNA binding domain; pfam08675"
                     /db_xref="CDD:400835"
     Site            order(454,456..458,475,477..478)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:409862"
     CDS             1..637
                     /gene="PARN"
                     /coded_by="XM_061152875.1:120..2033"
                     /db_xref="GeneID:133063466"
ORIGIN      
        1 meiirsnfks nlhkvyqaie eadffaidge fsgisdgpsv taltngfdtp eeryqklkkh
       61 smdfllfqfg lctfkydytd skyitksfnf yvfpkpfnrs spdvkfvcqs ssidflasqg
      121 fdfnkvfrng ipylnqeeer qlreqydekr sqsngagals ytspntskcp vtipddqkkf
      181 idqvvkkied llqseedknl dlepctgfqr kliyqtlswk ypkgihvetl etekkeryiv
      241 iskvdeeerr rreqqkhake qeelndavgf srvihaians gklvighnml ldvmhtvhqf
      301 ycplpadlne fkemttcvfp rlldtklmas tqpfkdiinn tslaelekrl ketpfnppkv
      361 esaegfpsyd taseqlheag ydayitglcf ismanylgsf lsppkshvsa rskliepffn
      421 klflmrvmdi pylnlegpdl qpkrdhvlhv tfpkewktsd lyqlfsafgn iqiswiddts
      481 afvslsqpeq vpiavntsky aesyriqtya dyvgkkreek qmkrkwteds wkevepkrln
      541 tqcvsyglqn hhytnsltat stvgkrnlsp sraeaglear vsgeisdtel eqtdpcaepl
      601 segrkkakkl krmkkdlspt gtisdssakl fevpdtw
//
LOCUS       XP_061008859             576 aa            linear   MAM 02-DEC-2023
DEFINITION  poly(A)-specific ribonuclease PARN isoform X2 [Dama dama].
ACCESSION   XP_061008859
VERSION     XP_061008859.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152876.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..576
                     /product="poly(A)-specific ribonuclease PARN isoform X2"
                     /calculated_mol_wt=66135
     Region          1..329
                     /region_name="CAF1"
                     /note="CAF1 family ribonuclease; pfam04857"
                     /db_xref="CDD:461457"
     Region          377..451
                     /region_name="RNA_bind"
                     /note="RNA binding domain; pfam08675"
                     /db_xref="CDD:400835"
     Site            order(393,395..397,414,416..417)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:409862"
     CDS             1..576
                     /gene="PARN"
                     /coded_by="XM_061152876.1:368..2098"
                     /db_xref="GeneID:133063466"
ORIGIN      
        1 mdfllfqfgl ctfkydytds kyitksfnfy vfpkpfnrss pdvkfvcqss sidflasqgf
       61 dfnkvfrngi pylnqeeerq lreqydekrs qsngagalsy tspntskcpv tipddqkkfi
      121 dqvvkkiedl lqseedknld lepctgfqrk liyqtlswky pkgihvetle tekkeryivi
      181 skvdeeerrr reqqkhakeq eelndavgfs rvihaiansg klvighnmll dvmhtvhqfy
      241 cplpadlnef kemttcvfpr lldtklmast qpfkdiinnt slaelekrlk etpfnppkve
      301 saegfpsydt aseqlheagy dayitglcfi smanylgsfl sppkshvsar skliepffnk
      361 lflmrvmdip ylnlegpdlq pkrdhvlhvt fpkewktsdl yqlfsafgni qiswiddtsa
      421 fvslsqpeqv piavntskya esyriqtyad yvgkkreekq mkrkwtedsw kevepkrlnt
      481 qcvsyglqnh hytnsltats tvgkrnlsps raeaglearv sgeisdtele qtdpcaepls
      541 egrkkakklk rmkkdlsptg tisdssaklf evpdtw
//
LOCUS       XP_061008860             570 aa            linear   MAM 02-DEC-2023
DEFINITION  poly(A)-specific ribonuclease PARN isoform X3 [Dama dama].
ACCESSION   XP_061008860
VERSION     XP_061008860.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152877.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..570
                     /product="poly(A)-specific ribonuclease PARN isoform X3"
                     /calculated_mol_wt=65323
     Region          11..323
                     /region_name="CAF1"
                     /note="CAF1 family ribonuclease; pfam04857"
                     /db_xref="CDD:461457"
     Region          371..445
                     /region_name="RNA_bind"
                     /note="RNA binding domain; pfam08675"
                     /db_xref="CDD:400835"
     Site            order(387,389..391,408,410..411)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:409862"
     CDS             1..570
                     /gene="PARN"
                     /coded_by="XM_061152877.1:318..2030"
                     /db_xref="GeneID:133063466"
ORIGIN      
        1 mvltlqkkgi rslkryitks fnfyvfpkpf nrsspdvkfv cqsssidfla sqgfdfnkvf
       61 rngipylnqe eerqlreqyd ekrsqsngag alsytspnts kcpvtipddq kkfidqvvkk
      121 iedllqseed knldlepctg fqrkliyqtl swkypkgihv etletekker yiviskvdee
      181 errrreqqkh akeqeelnda vgfsrvihai ansgklvigh nmlldvmhtv hqfycplpad
      241 lnefkemttc vfprlldtkl mastqpfkdi inntslaele krlketpfnp pkvesaegfp
      301 sydtaseqlh eagydayitg lcfismanyl gsflsppksh vsarskliep ffnklflmrv
      361 mdipylnleg pdlqpkrdhv lhvtfpkewk tsdlyqlfsa fgniqiswid dtsafvslsq
      421 peqvpiavnt skyaesyriq tyadyvgkkr eekqmkrkwt edswkevepk rlntqcvsyg
      481 lqnhhytnsl tatstvgkrn lspsraeagl earvsgeisd teleqtdpca eplsegrkka
      541 kklkrmkkdl sptgtisdss aklfevpdtw
//
LOCUS       XP_061008861             570 aa            linear   MAM 02-DEC-2023
DEFINITION  poly(A)-specific ribonuclease PARN isoform X3 [Dama dama].
ACCESSION   XP_061008861
VERSION     XP_061008861.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152878.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..570
                     /product="poly(A)-specific ribonuclease PARN isoform X3"
                     /calculated_mol_wt=65323
     Region          11..323
                     /region_name="CAF1"
                     /note="CAF1 family ribonuclease; pfam04857"
                     /db_xref="CDD:461457"
     Region          371..445
                     /region_name="RNA_bind"
                     /note="RNA binding domain; pfam08675"
                     /db_xref="CDD:400835"
     Site            order(387,389..391,408,410..411)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:409862"
     CDS             1..570
                     /gene="PARN"
                     /coded_by="XM_061152878.1:193..1905"
                     /db_xref="GeneID:133063466"
ORIGIN      
        1 mvltlqkkgi rslkryitks fnfyvfpkpf nrsspdvkfv cqsssidfla sqgfdfnkvf
       61 rngipylnqe eerqlreqyd ekrsqsngag alsytspnts kcpvtipddq kkfidqvvkk
      121 iedllqseed knldlepctg fqrkliyqtl swkypkgihv etletekker yiviskvdee
      181 errrreqqkh akeqeelnda vgfsrvihai ansgklvigh nmlldvmhtv hqfycplpad
      241 lnefkemttc vfprlldtkl mastqpfkdi inntslaele krlketpfnp pkvesaegfp
      301 sydtaseqlh eagydayitg lcfismanyl gsflsppksh vsarskliep ffnklflmrv
      361 mdipylnleg pdlqpkrdhv lhvtfpkewk tsdlyqlfsa fgniqiswid dtsafvslsq
      421 peqvpiavnt skyaesyriq tyadyvgkkr eekqmkrkwt edswkevepk rlntqcvsyg
      481 lqnhhytnsl tatstvgkrn lspsraeagl earvsgeisd teleqtdpca eplsegrkka
      541 kklkrmkkdl sptgtisdss aklfevpdtw
//
LOCUS       XP_061008863             450 aa            linear   MAM 02-DEC-2023
DEFINITION  bifunctional apoptosis regulator isoform X1 [Dama dama].
ACCESSION   XP_061008863
VERSION     XP_061008863.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152880.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..450
                     /product="bifunctional apoptosis regulator isoform X1"
                     /calculated_mol_wt=52522
     Region          31..82
                     /region_name="RING-HC_BAR"
                     /note="RING finger, HC subclass, found in bifunctional
                     apoptosis regulator (BAR); cd16497"
                     /db_xref="CDD:438160"
     Region          179..249
                     /region_name="SAM_BAR"
                     /note="SAM domain of BAR subfamily; cd09513"
                     /db_xref="CDD:188912"
     CDS             1..450
                     /gene="BFAR"
                     /coded_by="XM_061152880.1:269..1621"
                     /db_xref="GeneID:133063467"
ORIGIN      
        1 meespqndld aaslekndpl esaspqisin efschccydi lvnpttlncg hsfcrhclal
       61 wwasskktec pecrerwegf pkvnillrda veklfpdair mrfediqqnn divqslaafq
      121 kfgndqtpsa phpgrgnqhr gggfysgvlt altgvavvll vyhwssrese rhllvhkava
      181 rwtaeevvlw leqlgpwasl yrdrflserv ngrllltlte eefskapyti essshrrail
      241 telervkalg vkppqnlwey kavnpgrslf llyalksspr lgllylylfd ytdtflpfih
      301 ticplqedgs rediisklld lreptwkqwr eflikysflp yqliaefawd wlevhywtsr
      361 flivnamlls vlelfsfwri wsrselktvp qrmwshfwkv stqglfvamf wplipqfvcn
      421 clfywalyfn piinidlvvk evrrletqvl
//
LOCUS       XP_061008864             427 aa            linear   MAM 02-DEC-2023
DEFINITION  bifunctional apoptosis regulator isoform X2 [Dama dama].
ACCESSION   XP_061008864
VERSION     XP_061008864.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152881.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..427
                     /product="bifunctional apoptosis regulator isoform X2"
                     /calculated_mol_wt=49495
     Region          31..82
                     /region_name="RING-HC_BAR"
                     /note="RING finger, HC subclass, found in bifunctional
                     apoptosis regulator (BAR); cd16497"
                     /db_xref="CDD:438160"
     Region          179..249
                     /region_name="SAM_BAR"
                     /note="SAM domain of BAR subfamily; cd09513"
                     /db_xref="CDD:188912"
     CDS             1..427
                     /gene="BFAR"
                     /coded_by="XM_061152881.1:270..1553"
                     /db_xref="GeneID:133063467"
ORIGIN      
        1 meespqndld aaslekndpl esaspqisin efschccydi lvnpttlncg hsfcrhclal
       61 wwasskktec pecrerwegf pkvnillrda veklfpdair mrfediqqnn divqslaafq
      121 kfgndqtpsa phpgrgnqhr gggfysgvlt altgvavvll vyhwssrese rhllvhkava
      181 rwtaeevvlw leqlgpwasl yrdrflserv ngrllltlte eefskapyti essshrrail
      241 telervkalg vkppqnlwey kavnpgrslf llyalksspr lgllylylfd ytdtflpfih
      301 ticplqedgs rediisklll iaefawdwle vhywtsrfli vnamllsvle lfsfwriwsr
      361 selktvpqrm wshfwkvstq glfvamfwpl ipqfvcnclf ywalyfnpii nidlvvkevr
      421 rletqvl
//
LOCUS       XP_061008865             664 aa            linear   MAM 02-DEC-2023
DEFINITION  MAGE-like protein 2 [Dama dama].
ACCESSION   XP_061008865
VERSION     XP_061008865.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152882.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..664
                     /product="MAGE-like protein 2"
                     /calculated_mol_wt=70859
     Region          18..81
                     /region_name="TMEM238"
                     /note="TMEM238 protein family; pfam15125"
                     /db_xref="CDD:464516"
     Region          <209..653
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..664
                     /gene="LOC133063468"
                     /coded_by="XM_061152882.1:168..2162"
                     /db_xref="GeneID:133063468"
ORIGIN      
        1 mevsvnhvsk tkersclgrc khffwlgvtf dtvgaatlft gvfsrlhyyd iflylgasmi
       61 flsllwwtfw ysgnielsse ealnspyrlp sastlevlsq tinnrftfti gsvsntfmrm
      121 rrrrrrrlrq rflegqtsld mtvtgqvenq ldqdkdreeg aaekgeaqdf cskdlpkpea
      181 iksfkeacsq vpdagdlgre aslpkfvkgp stslvqpftp spldqpptpv iltskslpvv
      241 slasmsqtap iltsksqpvv alastsqpla vtlvsmsqla aplasasqpp plltsksqsv
      301 vslavvssts qppavtlast rqpavpltst tqpqvvfask slpvvslsfa sqpltirtsq
      361 nyplmpvtsq sqlpvpvase ghplvpvase ghplvpvase ghplvprvsq syplvprtsp
      421 gqplvprvsq syplvlpasq nqlpvpvase ghplapvape ghplapvape ghplapvape
      481 ghplapvase ghplapvape ghplvpvase ghplvpvtsq rqlqnllevc qtgppplqas
      541 qspslstisl lqvlpteslq tqpmdlqvaq avlelqtmyh tqrasqstsl vqeirpsqpp
      601 saqefhtepv aletpppadq elsqdrpdaa alspqspapa aqaqqsepsg lvptlaqerk
      661 srsi
//
LOCUS       XP_061008866             787 aa            linear   MAM 02-DEC-2023
DEFINITION  pyridoxal-dependent decarboxylase domain-containing protein 1 [Dama
            dama].
ACCESSION   XP_061008866
VERSION     XP_061008866.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152883.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..787
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..787
                     /product="pyridoxal-dependent decarboxylase
                     domain-containing protein 1"
                     /calculated_mol_wt=86393
     Region          <173..481
                     /region_name="GadA"
                     /note="Glutamate or tyrosine decarboxylase or a related
                     PLP-dependent protein [Amino acid transport and
                     metabolism]; COG0076"
                     /db_xref="CDD:439846"
     CDS             1..787
                     /gene="PDXDC1"
                     /coded_by="XM_061152883.1:138..2501"
                     /db_xref="GeneID:133063469"
ORIGIN      
        1 mdaslekkia dptlaemgkn lkeamkmled sqrrteeeng kkllsgdipg plqgsgqdmv
       61 silqlvqnlm hgdedeepqs triqnigeqg hisllghslg ayistldkek lrklttrils
      121 dttlwlcrif ryengcayfh eeereglaki crlaihsrye dfvvdgfnvl ynrkpviyls
      181 aaarpglgqy lcnqlglpfp clcrvpcntv fgsqhqmdva fleklikddi ergklplllv
      241 anagtaavgh tdkigrlkel ceqygiwlhv egvnlatlal gyvsssvlaa tkcdsmvltp
      301 gpwlglpavp avtlykhddp altlvsglts nkpadklral plwlslqylg ldgiverikh
      361 acqlsqrlqe slkkvnhiki lvedelsspv vvfrffqelp gsdpglnatp apsaapsavg
      421 rerhscdaln rwlgeqlkql vpvsgltvmd levegtcmrf splmtaavlg trgedvdqlv
      481 acvqsklpvl tctlqlreef kqevmatagl lyvddpnwpg igvvryehan ddksslkldp
      541 egekihagll kklnelesdl tfkmgpeyks mksciyigma sddidvselv etiavtarei
      601 eensrllenm tevvrkgiqe aqvqlqkane erlleegvlr qipvvgsvln wfspvqasqk
      661 grtfnltags lestehtyvy kvqgsgvtpp qtptgtrtkq rlpgqkpfrr slrgsdaise
      721 tssvshiedl ekmeqlsggq easeansper hpgapaplea eppgapqdga qglqgdhpqv
      781 eepeslr
//
LOCUS       XP_061008867             651 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA polymerase I-specific transcription initiation factor RRN3
            [Dama dama].
ACCESSION   XP_061008867
VERSION     XP_061008867.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152884.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..651
                     /product="RNA polymerase I-specific transcription
                     initiation factor RRN3"
                     /calculated_mol_wt=73941
     Region          60..585
                     /region_name="RRN3"
                     /note="RNA polymerase I specific transcription initiation
                     factor RRN3; pfam05327"
                     /db_xref="CDD:461623"
     CDS             1..651
                     /gene="RRN3"
                     /coded_by="XM_061152884.1:50..2005"
                     /db_xref="GeneID:133063470"
ORIGIN      
        1 maapllhtrl pgdaaasasa vktlgssrtg lsdmltlend ffsspprktv rfggtvtevl
       61 lkykkgetnd fellknqlsd peikddqiin wllefrssim yltkdfeqli nillrlqwln
      121 rsqtvveeyl sflgnlvsaq tvflrpclsm iashfvpprv vikegdvdvs dsddedenlp
      181 anfdtchral qiiaryvpst pwflmpilve kfpfvrkser tlecyvhnll risvyfptlr
      241 heilelvvek llkldvnasr qdiedaeeaa aqtgggadat ealfnmdede eadhetkadp
      301 grldqmvhpm aerldillsl llsyikdvcy vdgkidnnkt kdlyrdliti fdklllptha
      361 schvqffmfy lcsfklgfae aflehlwkkl qdpnnpaiir qaaanyigsf larakfipli
      421 tvkscldllv nwlhvylnnq dsgtkafcdv alhgpfysac qavfytfvfr hkqllsgnlk
      481 eglrylqsln ferivmsqln plkiclpsvv nffaaitnky qlvfcytlie rnnrqmlpvi
      541 rntaggdsvq tctnpldtff pfdpcvlkrs kkfidplyqi wedmsaeelq efkkpikkev
      601 vedeeddflk gevgitpssf dahfrspsss vgsppvlylp dqsplvtric d
//
LOCUS       XP_061008868             310 aa            linear   MAM 02-DEC-2023
DEFINITION  protein N-terminal asparagine amidohydrolase isoform X1 [Dama
            dama].
ACCESSION   XP_061008868
VERSION     XP_061008868.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152885.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..310
                     /product="protein N-terminal asparagine amidohydrolase
                     isoform X1"
                     /calculated_mol_wt=34526
     Region          36..304
                     /region_name="N_Asn_amidohyd"
                     /note="Protein N-terminal asparagine amidohydrolase;
                     pfam14736"
                     /db_xref="CDD:464288"
     CDS             1..310
                     /gene="NTAN1"
                     /coded_by="XM_061152885.1:60..992"
                     /db_xref="GeneID:133063471"
ORIGIN      
        1 mpllvdgrrv rlpqsagdlv rahplleera rllrgqsvqq vgpqgllyvq qrelavtspk
       61 dgsisilgsd dattchivvl rhtgngatcl thcdgsdtka evplimnaik sfsdhtrcgr
      121 leahlvggfn ddrqlsqklt hqllsefdrq eddihlvtlc vtelndreen eshfpviygi
      181 avnvktaeiy rasfqdrgpe eelraaralt ggpmisiyda kteqlrigpy swtpfphvdf
      241 wlqqedkqil enlstsplae pphfvehirs tlmflkkhps pantlfpgnk allykknedg
      301 lwekisspgs
//
LOCUS       XP_061008869             205 aa            linear   MAM 02-DEC-2023
DEFINITION  protein N-terminal asparagine amidohydrolase isoform X2 [Dama
            dama].
ACCESSION   XP_061008869
VERSION     XP_061008869.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152886.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..205
                     /product="protein N-terminal asparagine amidohydrolase
                     isoform X2"
                     /calculated_mol_wt=23269
     Region          <1..199
                     /region_name="N_Asn_amidohyd"
                     /note="Protein N-terminal asparagine amidohydrolase;
                     pfam14736"
                     /db_xref="CDD:464288"
     CDS             1..205
                     /gene="NTAN1"
                     /coded_by="XM_061152886.1:253..870"
                     /db_xref="GeneID:133063471"
ORIGIN      
        1 mnaiksfsdh trcgrleahl vggfnddrql sqklthqlls efdrqeddih lvtlcvteln
       61 dreeneshfp viygiavnvk taeiyrasfq drgpeeelra araltggpmi siydakteql
      121 rigpyswtpf phvdfwlqqe dkqilenlst splaepphfv ehirstlmfl kkhpspantl
      181 fpgnkallyk knedglweki sspgs
//
LOCUS       XP_061008870             205 aa            linear   MAM 02-DEC-2023
DEFINITION  protein N-terminal asparagine amidohydrolase isoform X2 [Dama
            dama].
ACCESSION   XP_061008870
VERSION     XP_061008870.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152887.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..205
                     /product="protein N-terminal asparagine amidohydrolase
                     isoform X2"
                     /calculated_mol_wt=23269
     Region          <1..199
                     /region_name="N_Asn_amidohyd"
                     /note="Protein N-terminal asparagine amidohydrolase;
                     pfam14736"
                     /db_xref="CDD:464288"
     CDS             1..205
                     /gene="NTAN1"
                     /coded_by="XM_061152887.1:190..807"
                     /db_xref="GeneID:133063471"
ORIGIN      
        1 mnaiksfsdh trcgrleahl vggfnddrql sqklthqlls efdrqeddih lvtlcvteln
       61 dreeneshfp viygiavnvk taeiyrasfq drgpeeelra araltggpmi siydakteql
      121 rigpyswtpf phvdfwlqqe dkqilenlst splaepphfv ehirstlmfl kkhpspantl
      181 fpgnkallyk knedglweki sspgs
//
LOCUS       XP_061008871             204 aa            linear   MAM 02-DEC-2023
DEFINITION  bMERB domain-containing protein 1 [Dama dama].
ACCESSION   XP_061008871
VERSION     XP_061008871.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152888.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..204
                     /product="bMERB domain-containing protein 1"
                     /calculated_mol_wt=23427
     Region          <51..148
                     /region_name="bMERB_dom"
                     /note="Bivalent Mical/EHBP Rab binding domain; pfam12130"
                     /db_xref="CDD:463467"
     CDS             1..204
                     /gene="BMERB1"
                     /coded_by="XM_061152888.1:111..725"
                     /db_xref="GeneID:133063473"
ORIGIN      
        1 melkqslsih leaekplrry gaveetawka eglgrnqldi ismaettmrp eeielemaki
       61 qrlrevlvrr eselrfmmdd iqlcndimdl kqelqnlvai pekektklqk qredeliqki
      121 hklvqkrdfl vddaeverlr eqeedkemad flriklkpld kvtkssassr aekkaeppps
      181 kptvaktgla likdccgaaq csim
//
LOCUS       XP_061008872             196 aa            linear   MAM 02-DEC-2023
DEFINITION  mpv17-like protein isoform X1 [Dama dama].
ACCESSION   XP_061008872
VERSION     XP_061008872.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152889.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..196
                     /product="mpv17-like protein isoform X1"
                     /calculated_mol_wt=22184
     Region          106..165
                     /region_name="Mpv17_PMP22"
                     /note="Mpv17 / PMP22 family; pfam04117"
                     /db_xref="CDD:461182"
     CDS             1..196
                     /gene="MPV17L"
                     /coded_by="XM_061152889.1:26..616"
                     /db_xref="GeneID:133063474"
ORIGIN      
        1 mvrwwqaltr aagrypwpan vllyagffsg gdalqqllrg gpadwqhtqh vatvavafha
       61 nfnyvwlsll eralpgrapr tilakvlcdq alggpvyvst fyagmsilqg kddifldmrq
      121 kfwntyksgl mywpfvqltn fslipvrwrt aytglcgflw atflcfsqqd gdgtfksaft
      181 fhrtkgtnev erppek
//
LOCUS       XP_061008873             147 aa            linear   MAM 02-DEC-2023
DEFINITION  mpv17-like protein isoform X2 [Dama dama].
ACCESSION   XP_061008873
VERSION     XP_061008873.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152890.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..147
                     /product="mpv17-like protein isoform X2"
                     /calculated_mol_wt=16351
     CDS             1..147
                     /gene="MPV17L"
                     /coded_by="XM_061152890.1:26..469"
                     /db_xref="GeneID:133063474"
ORIGIN      
        1 mvrwwqaltr aagrypwpan vllyagffsg gdalqqllrg gpadwqhtqh vatvavafha
       61 nfnyvwlsll eralpgrapr tilakvlcdq alggpvyvst fyaewsdvla fctadqlqph
      121 srslanslhw tlwfsvghlp llfttgw
//
LOCUS       XP_061008875            1741 aa            linear   MAM 02-DEC-2023
DEFINITION  meiosis regulator and mRNA stability factor 1 isoform X1 [Dama
            dama].
ACCESSION   XP_061008875
VERSION     XP_061008875.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152892.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1741
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1741
                     /product="meiosis regulator and mRNA stability factor 1
                     isoform X1"
                     /calculated_mol_wt=192162
     Region          351..473
                     /region_name="PIN_limkain_b1_N_like"
                     /note="N-terminal LabA-like PIN domain of limkain b1 and
                     similar proteins; cd10910"
                     /db_xref="CDD:350234"
     Region          508..580
                     /region_name="RRM1_LKAP"
                     /note="RNA recognition motif 1 (RRM1) found in Limkain-b1
                     (LKAP) and similar proteins; cd12255"
                     /db_xref="CDD:409700"
     Region          785..873
                     /region_name="RRM2_LKAP"
                     /note="RNA recognition motif 2 (RRM2) found in Limkain-b1
                     (LKAP) and similar proteins; cd12256"
                     /db_xref="CDD:409701"
     Region          876..1087
                     /region_name="MARF1_LOTUS"
                     /note="MARF1 LOTUS domain; pfam19687"
                     /db_xref="CDD:437519"
     Region          1099..1170
                     /region_name="LOTUS_3_Limkain_b1"
                     /note="The third LOTUS domain on Limkain b1(LKAP);
                     cd09979"
                     /db_xref="CDD:193593"
     Region          1175..1246
                     /region_name="LOTUS_4_Limkain_b1"
                     /note="The fourth LOTUS domain on Limkain b1(LKAP);
                     cd09980"
                     /db_xref="CDD:193594"
     Region          1259..1329
                     /region_name="LOTUS_5_Limkain_b1"
                     /note="The fifth LOTUS domain on Limkain b1(LKAP);
                     cd09981"
                     /db_xref="CDD:193595"
     Region          1335..1405
                     /region_name="LOTUS_6_Limkain_b1"
                     /note="The sixth LOTUS domain on Limkain b1(LKAP);
                     cd09982"
                     /db_xref="CDD:193596"
     Region          1411..1483
                     /region_name="LOTUS_7_Limkain_b1"
                     /note="The seventh LOTUS domain on Limkain b1(LKAP);
                     cd09983"
                     /db_xref="CDD:193597"
     Region          1486..1561
                     /region_name="LOTUS_8_Limkain_b1"
                     /note="The eighth LOTUS domain on Limkain b1(LKAP);
                     cd09984"
                     /db_xref="CDD:193598"
     CDS             1..1741
                     /gene="MARF1"
                     /coded_by="XM_061152892.1:176..5401"
                     /db_xref="GeneID:133063476"
ORIGIN      
        1 mmegngaenp csrtigwlqq dndakpwlwk fsncfsrpeq tlplspqtkd ymenkkvave
       61 lkdvpsplha gsklfpavpl pdihslqqpk vqlstvpkvs ccahctndps tspvrfgggs
      121 gggtgslvpp galldsqstr titcqvgsgl afqsapplqn asarntlagv asdfpsmcle
      181 snlssckhlp ccgklhfqsc hgnahklhqf palqgcsssa gyfpcsdfts gapghleehi
      241 sqseltphlc tnslhlnvvp pvclkgslyc edclnkparn siidaakvwp nipppntqta
      301 pvtvplcngc gtkgagkett lllattlgta askfgspevt lagqmlenlp pigvfwdien
      361 csvpsgrsat avvqrirekf fkghreaefi cvcdiskenk eviqelnncq vtvahinata
      421 knaaddklrq slrrfantht apatvvlvst dvnfalelsd lrhrhgfhii lvhknqasea
      481 llhhanelir feefisdlpp rlplkmpcht llyvynlpan kdgksisnrl rrlsdncggk
      541 vlnitgcsai lrfinrdsae ralkrmened vfgnriivsf tpksgelcet kssnaiadkv
      601 kspkklknpk lclikdises pssakaapgk gsqansgsap kntnvkslqe lcrlesktst
      661 rssepqqghl rpgvpphrnl saaapasktp glaesvyktn pkkenlsars vtsspvekke
      721 reetlfqvsy psafsklias rqvsplltaq pwssrslspn llnrasplaf navhssvgad
      781 cpdpfahgvd vqisnldyrl srkelqqlmq eafsrhgkvk svelsphtdy qlkavvqmen
      841 lqeaigavns lhrhkigskk ilvslatgaa nkslsllsae tmsilqdapa cclplfkftd
      901 iyekkfghrl nvsdlykltd tvaireqgng rlvcllpssq arqsplgssq shdgsstncs
      961 piifeeleyh epvcrqhcpn kdfsehefdp dsykipfvil slktfapqvh sllqthegtv
     1021 pllsfpdcya aefgeleivq enrgggvple hlitcvpgvn iataqngvkv vkwihnkppp
     1081 pntdpwllrs kspvgnpqli qfsrevidll knqpscvipi snfipsyhhh fakqcrvsdy
     1141 gysklielle avphvlqilg mgskrlltlt hraqvkrftq dllkllksqa skqvivrefa
     1201 qayhwcfskd wdvteygvce lidiiseipd tticlsqqds eaviciprre rtqdeiertk
     1261 qfskdvvdll rhqphfrmpf nkfipsyhhh fgrqcklayy gftkllelfe aipdilqvle
     1321 cgeekiltlt everfkalaa qfvkllrsqk dnclmmtdll keyaktfgyt frlqdydvss
     1381 vsaltqklch vvkvadmesg kqiqlinrks lraltaqllv llmswegtth lsvdelkrhy
     1441 esthstplnp ceygfmtlte llkslpylve vftndkteec vkltslylfa knvrsllhty
     1501 hyqqlflhef smaytkyvge tlqpktygfg sveellgaip qvvwikghgh krivvlkndm
     1561 ksrvsslglp pashetqpsa perilevpes ppaselrlgv ggdgphpaeq ellrlandsp
     1621 vdllcapvps clpspqlrpd pvvlqasdli wfeehpqeps eimilnqeek ieipvpikne
     1681 nlpphpsspg vlaavpapps pssetpeslh skdpmespak kqpknrvkla anfsfapitk
     1741 l
//
LOCUS       XP_061008876            1732 aa            linear   MAM 02-DEC-2023
DEFINITION  meiosis regulator and mRNA stability factor 1 isoform X2 [Dama
            dama].
ACCESSION   XP_061008876
VERSION     XP_061008876.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152893.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1732
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1732
                     /product="meiosis regulator and mRNA stability factor 1
                     isoform X2"
                     /calculated_mol_wt=191167
     Region          351..473
                     /region_name="PIN_limkain_b1_N_like"
                     /note="N-terminal LabA-like PIN domain of limkain b1 and
                     similar proteins; cd10910"
                     /db_xref="CDD:350234"
     Region          508..580
                     /region_name="RRM1_LKAP"
                     /note="RNA recognition motif 1 (RRM1) found in Limkain-b1
                     (LKAP) and similar proteins; cd12255"
                     /db_xref="CDD:409700"
     Region          776..864
                     /region_name="RRM2_LKAP"
                     /note="RNA recognition motif 2 (RRM2) found in Limkain-b1
                     (LKAP) and similar proteins; cd12256"
                     /db_xref="CDD:409701"
     Region          867..1078
                     /region_name="MARF1_LOTUS"
                     /note="MARF1 LOTUS domain; pfam19687"
                     /db_xref="CDD:437519"
     Region          1090..1161
                     /region_name="LOTUS_3_Limkain_b1"
                     /note="The third LOTUS domain on Limkain b1(LKAP);
                     cd09979"
                     /db_xref="CDD:193593"
     Region          1166..1237
                     /region_name="LOTUS_4_Limkain_b1"
                     /note="The fourth LOTUS domain on Limkain b1(LKAP);
                     cd09980"
                     /db_xref="CDD:193594"
     Region          1250..1320
                     /region_name="LOTUS_5_Limkain_b1"
                     /note="The fifth LOTUS domain on Limkain b1(LKAP);
                     cd09981"
                     /db_xref="CDD:193595"
     Region          1326..1396
                     /region_name="LOTUS_6_Limkain_b1"
                     /note="The sixth LOTUS domain on Limkain b1(LKAP);
                     cd09982"
                     /db_xref="CDD:193596"
     Region          1402..1474
                     /region_name="LOTUS_7_Limkain_b1"
                     /note="The seventh LOTUS domain on Limkain b1(LKAP);
                     cd09983"
                     /db_xref="CDD:193597"
     Region          1477..1552
                     /region_name="LOTUS_8_Limkain_b1"
                     /note="The eighth LOTUS domain on Limkain b1(LKAP);
                     cd09984"
                     /db_xref="CDD:193598"
     CDS             1..1732
                     /gene="MARF1"
                     /coded_by="XM_061152893.1:176..5374"
                     /db_xref="GeneID:133063476"
ORIGIN      
        1 mmegngaenp csrtigwlqq dndakpwlwk fsncfsrpeq tlplspqtkd ymenkkvave
       61 lkdvpsplha gsklfpavpl pdihslqqpk vqlstvpkvs ccahctndps tspvrfgggs
      121 gggtgslvpp galldsqstr titcqvgsgl afqsapplqn asarntlagv asdfpsmcle
      181 snlssckhlp ccgklhfqsc hgnahklhqf palqgcsssa gyfpcsdfts gapghleehi
      241 sqseltphlc tnslhlnvvp pvclkgslyc edclnkparn siidaakvwp nipppntqta
      301 pvtvplcngc gtkgagkett lllattlgta askfgspevt lagqmlenlp pigvfwdien
      361 csvpsgrsat avvqrirekf fkghreaefi cvcdiskenk eviqelnncq vtvahinata
      421 knaaddklrq slrrfantht apatvvlvst dvnfalelsd lrhrhgfhii lvhknqasea
      481 llhhanelir feefisdlpp rlplkmpcht llyvynlpan kdgksisnrl rrlsdncggk
      541 vlnitgcsai lrfinrdsae ralkrmened vfgnriivsf tpksgelcet kssnaiadkv
      601 kspkklknpk lclikdises pssakaapgk gsqansgsap kntnvkslqe lcrlesktst
      661 rssepqqghl rpgvpphrnl saaapasktp glaesvyktn pkkenlsars vtsspvekke
      721 reetlfqvsy psafsklias rqvsplltaq pwssraspla fnavhssvga dcpdpfahgv
      781 dvqisnldyr lsrkelqqlm qeafsrhgkv ksvelsphtd yqlkavvqme nlqeaigavn
      841 slhrhkigsk kilvslatga ankslsllsa etmsilqdap acclplfkft diyekkfghr
      901 lnvsdlyklt dtvaireqgn grlvcllpss qarqsplgss qshdgsstnc spiifeeley
      961 hepvcrqhcp nkdfsehefd pdsykipfvi lslktfapqv hsllqthegt vpllsfpdcy
     1021 aaefgeleiv qenrgggvpl ehlitcvpgv niataqngvk vvkwihnkpp ppntdpwllr
     1081 skspvgnpql iqfsrevidl lknqpscvip isnfipsyhh hfakqcrvsd ygyskliell
     1141 eavphvlqil gmgskrlltl thraqvkrft qdllkllksq askqvivref aqayhwcfsk
     1201 dwdvteygvc elidiiseip dtticlsqqd seaviciprr ertqdeiert kqfskdvvdl
     1261 lrhqphfrmp fnkfipsyhh hfgrqcklay ygftkllelf eaipdilqvl ecgeekiltl
     1321 teverfkala aqfvkllrsq kdnclmmtdl lkeyaktfgy tfrlqdydvs svsaltqklc
     1381 hvvkvadmes gkqiqlinrk slraltaqll vllmswegtt hlsvdelkrh yesthstpln
     1441 pceygfmtlt ellkslpylv evftndktee cvkltslylf aknvrsllht yhyqqlflhe
     1501 fsmaytkyvg etlqpktygf gsveellgai pqvvwikghg hkrivvlknd mksrvsslgl
     1561 ppashetqps aperilevpe sppaselrlg vggdgphpae qellrlands pvdllcapvp
     1621 sclpspqlrp dpvvlqasdl iwfeehpqep seimilnqee kieipvpikn enlpphpssp
     1681 gvlaavpapp spssetpesl hskdpmespa kkqpknrvkl aanfsfapit kl
//
LOCUS       XP_061008877            1563 aa            linear   MAM 02-DEC-2023
DEFINITION  meiosis regulator and mRNA stability factor 1 isoform X3 [Dama
            dama].
ACCESSION   XP_061008877
VERSION     XP_061008877.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152894.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1563
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1563
                     /product="meiosis regulator and mRNA stability factor 1
                     isoform X3"
                     /calculated_mol_wt=173777
     Region          173..295
                     /region_name="PIN_limkain_b1_N_like"
                     /note="N-terminal LabA-like PIN domain of limkain b1 and
                     similar proteins; cd10910"
                     /db_xref="CDD:350234"
     Region          330..402
                     /region_name="RRM1_LKAP"
                     /note="RNA recognition motif 1 (RRM1) found in Limkain-b1
                     (LKAP) and similar proteins; cd12255"
                     /db_xref="CDD:409700"
     Region          607..695
                     /region_name="RRM2_LKAP"
                     /note="RNA recognition motif 2 (RRM2) found in Limkain-b1
                     (LKAP) and similar proteins; cd12256"
                     /db_xref="CDD:409701"
     Region          698..909
                     /region_name="MARF1_LOTUS"
                     /note="MARF1 LOTUS domain; pfam19687"
                     /db_xref="CDD:437519"
     Region          921..992
                     /region_name="LOTUS_3_Limkain_b1"
                     /note="The third LOTUS domain on Limkain b1(LKAP);
                     cd09979"
                     /db_xref="CDD:193593"
     Region          997..1068
                     /region_name="LOTUS_4_Limkain_b1"
                     /note="The fourth LOTUS domain on Limkain b1(LKAP);
                     cd09980"
                     /db_xref="CDD:193594"
     Region          1081..1151
                     /region_name="LOTUS_5_Limkain_b1"
                     /note="The fifth LOTUS domain on Limkain b1(LKAP);
                     cd09981"
                     /db_xref="CDD:193595"
     Region          1157..1227
                     /region_name="LOTUS_6_Limkain_b1"
                     /note="The sixth LOTUS domain on Limkain b1(LKAP);
                     cd09982"
                     /db_xref="CDD:193596"
     Region          1233..1305
                     /region_name="LOTUS_7_Limkain_b1"
                     /note="The seventh LOTUS domain on Limkain b1(LKAP);
                     cd09983"
                     /db_xref="CDD:193597"
     Region          1308..1383
                     /region_name="LOTUS_8_Limkain_b1"
                     /note="The eighth LOTUS domain on Limkain b1(LKAP);
                     cd09984"
                     /db_xref="CDD:193598"
     CDS             1..1563
                     /gene="MARF1"
                     /coded_by="XM_061152894.1:176..4867"
                     /db_xref="GeneID:133063476"
ORIGIN      
        1 mmegngaenp csrtigwlqq dndakpwlwk fsncfsrpeq tlplspqtkd ymenkkvave
       61 lkdvpsplha gsklfpavpl pdihslqqpk vqlstvpkpa rnsiidaakv wpnipppntq
      121 tapvtvplcn gcgtkgagke ttlllattlg taaskfgspe vtlagqmlen lppigvfwdi
      181 encsvpsgrs atavvqrire kffkghreae ficvcdiske nkeviqelnn cqvtvahina
      241 taknaaddkl rqslrrfant htapatvvlv stdvnfalel sdlrhrhgfh iilvhknqas
      301 eallhhanel irfeefisdl pprlplkmpc htllyvynlp ankdgksisn rlrrlsdncg
      361 gkvlnitgcs ailrfinrds aeralkrmen edvfgnriiv sftpksgelc etkssnaiad
      421 kvkspkklkn pklclikdis espssakaap gkgsqansgs apkntnvksl qelcrleskt
      481 strssepqqg hlrpgvpphr nlsaaapask tpglaesvyk tnpkkenlsa rsvtsspvek
      541 kereetlfqv sypsafskli asrqvspllt aqpwssrsls pnllnraspl afnavhssvg
      601 adcpdpfahg vdvqisnldy rlsrkelqql mqeafsrhgk vksvelspht dyqlkavvqm
      661 enlqeaigav nslhrhkigs kkilvslatg aankslslls aetmsilqda pacclplfkf
      721 tdiyekkfgh rlnvsdlykl tdtvaireqg ngrlvcllps sqarqsplgs sqshdgsstn
      781 cspiifeele yhepvcrqhc pnkdfsehef dpdsykipfv ilslktfapq vhsllqtheg
      841 tvpllsfpdc yaaefgelei vqenrgggvp lehlitcvpg vniataqngv kvvkwihnkp
      901 pppntdpwll rskspvgnpq liqfsrevid llknqpscvi pisnfipsyh hhfakqcrvs
      961 dygyskliel leavphvlqi lgmgskrllt lthraqvkrf tqdllkllks qaskqvivre
     1021 faqayhwcfs kdwdvteygv celidiisei pdtticlsqq dseavicipr rertqdeier
     1081 tkqfskdvvd llrhqphfrm pfnkfipsyh hhfgrqckla yygftkllel feaipdilqv
     1141 lecgeekilt lteverfkal aaqfvkllrs qkdnclmmtd llkeyaktfg ytfrlqdydv
     1201 ssvsaltqkl chvvkvadme sgkqiqlinr kslraltaql lvllmswegt thlsvdelkr
     1261 hyesthstpl npceygfmtl tellkslpyl vevftndkte ecvkltslyl faknvrsllh
     1321 tyhyqqlflh efsmaytkyv getlqpktyg fgsveellga ipqvvwikgh ghkrivvlkn
     1381 dmksrvsslg lppashetqp saperilevp esppaselrl gvggdgphpa eqellrland
     1441 spvdllcapv psclpspqlr pdpvvlqasd liwfeehpqe pseimilnqe ekieipvpik
     1501 nenlpphpss pgvlaavpap pspssetpes lhskdpmesp akkqpknrvk laanfsfapi
     1561 tkl
//
LOCUS       XP_061008878            1979 aa            linear   MAM 02-DEC-2023
DEFINITION  myosin-11 isoform X1 [Dama dama].
ACCESSION   XP_061008878
VERSION     XP_061008878.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152895.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1979
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1979
                     /product="myosin-11 isoform X1"
                     /calculated_mol_wt=228280
     Region          31..76
                     /region_name="Myosin_N"
                     /note="Myosin N-terminal SH3-like domain; pfam02736"
                     /db_xref="CDD:460670"
     Region          99..778
                     /region_name="MYSc_class_II"
                     /note="class II myosins, motor domain; cd01377"
                     /db_xref="CDD:276951"
     Site            order(126..134,178..185,238..248,466..471)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276951"
     Site            126..134
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276951"
     Site            178..185
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276951"
     Site            238..248
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276951"
     Site            466..471
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276951"
     Site            495..518
                     /site_type="other"
                     /note="relay loop"
                     /db_xref="CDD:276951"
     Site            710..719
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276951"
     Site            order(722..738,767..778)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276951"
     Region          855..1935
                     /region_name="Myosin_tail_1"
                     /note="Myosin tail; pfam01576"
                     /db_xref="CDD:460256"
     CDS             1..1979
                     /gene="MYH11"
                     /coded_by="XM_061152895.1:175..6114"
                     /db_xref="GeneID:133063477"
ORIGIN      
        1 maqkdqlsdd ekflfvdknf innpvaqadw aakklvwvps ekqgfeaasi keekgdeviv
       61 elvengkkvt vgkddiqkmn ppkfskvedm aeltclneas vlhnlreryf sgliytysgl
      121 fcvvvnpykq lpiysekiie mykgkkrhem pphiyaiadt ayrsmlqdre dqsilctges
      181 gagktentkk viqylamvas shkgkkdtsi tqgpsfayge lekqllqanp ileafgnakt
      241 vkndnssrfg kfirinfdvt gyivganiet ylleksrair qardertfhi fyyliagake
      301 kmrndllleg fnnytflsng fvpipaaqdd emfnetveam aimgfteeeq lsilrvvssv
      361 lqlgnivfkk erntdqasmp dntaaqkvch lmginvtdft rsiltprikv grdvvqkaqt
      421 keqadfavea lakatyerlf rwiltrvnka ldkthrqgas flgildiagf eifevnsfeq
      481 lcinytnekl qqlfnhtmfi leqeeyqreg iewnfidfgl dlqpcielie rpnnppgvla
      541 lldeecwfpk atdksfvekl cseqgshpkf qkpkqlkdkt efsiihyagk vdynasawlt
      601 knmdplndnv tsllnassdk fvadlwkdvd rivgldqmak mtesslpsas ktkkgmfrtv
      661 gqlykeqlgk lmttlrnttp nfvrciipnh ekrsgkldaf lvleqlrcng vlegiricrq
      721 gfpnrivfqe frqryeilaa naipkgfmdg kqacilmika leldpnlyri gqskiffrtg
      781 vlahleeerd lkitdvimaf qamcrgylar kafakrqqql tamkviqrnc aaylklrnwq
      841 wwrlftkvkp llqvtrqeee mqakedelqk tkerqqkaes elkeleqkhs qlteeknllq
      901 eqlqaetely aeaeemrvrl aakkqeleei lhemearlee eedrgqqlqa erkkmaqqml
      961 dleeqleeee aarqklqlek vtaeakikkl eddilvmddq nnklskerkl leerisdltt
     1021 nlaeeeekak nltklknkhe smiselevrl kkeeksrqel eklkrkldge asdlheqiae
     1081 lqaqiaelkm qlakkeeelq aalgrlddem aqknnalkki releghisdl qedldseraa
     1141 rnkaekqkrd lgeelealkt eledtldsta aqqelrakre qevtmlkkal deetrshecq
     1201 vqemrqkhtq vveelteqle qfkrakanld knkqaleken adlsgelrvl sqakqevehk
     1261 kkklevqlqe lqskysdger vraelndkvh klqnevesvt gmlneaegka iklakdvasl
     1321 gsqlqdtqel lqeetrqkln vstklrqled ernslqeqld eemeakqnle rhistlniql
     1381 sdskkklqdf astvefleeg kkkfqkeieg ltqqyeekaa aydklektkn rlqqelddlv
     1441 vdldnqrqlv snlekkqkkf dqllaeekni sskyaderdr aeaeareket kalslarale
     1501 ealeakeele rtnkmlkaem edlvsskddv gknvheleks kraletqmee mktqleeled
     1561 elqatedakl rlevnmqalk vqferdlqar deqneekrrq lqrqlheyet elederkqra
     1621 lavaakkkle gdlkdlelqa dsavkgreea ikqlrklqaq mkdfqreled artsrdeifa
     1681 takenekkak sleadlmqlq edlaaaerar kqadlekdel aeelassvsg rntlqdekrr
     1741 leariaqlee eleeeqgnte amsdrvrkat qqaeqlsnel aterstaqkn enarqqlerq
     1801 nkelrsklqe megavkskfk stiaaleaki aqleeqveqe arekqaaaks lkqkdkklke
     1861 allqvederk maeqykeqae kgnvrvrqlk rqleeaeees qrinanrrkl qreldeates
     1921 neamgrevta lksklrrgne tsfvptrrsg grrvienadg seeemdarda dfngtkase
//
LOCUS       XP_061008879            1972 aa            linear   MAM 02-DEC-2023
DEFINITION  myosin-11 isoform X2 [Dama dama].
ACCESSION   XP_061008879
VERSION     XP_061008879.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152896.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1972
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1972
                     /product="myosin-11 isoform X2"
                     /calculated_mol_wt=227530
     Region          31..76
                     /region_name="Myosin_N"
                     /note="Myosin N-terminal SH3-like domain; pfam02736"
                     /db_xref="CDD:460670"
     Region          99..771
                     /region_name="MYSc_Myh11"
                     /note="class II myosin heavy chain 11, motor domain;
                     cd14921"
                     /db_xref="CDD:276885"
     Site            order(126..134,178..185,231..241,459..464)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276885"
     Site            126..134
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276885"
     Site            178..185
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276885"
     Site            231..241
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276885"
     Site            459..464
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276885"
     Site            order(488..499,502..511)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276885"
     Site            703..713
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276885"
     Site            715..771
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276885"
     Region          848..1928
                     /region_name="Myosin_tail_1"
                     /note="Myosin tail; pfam01576"
                     /db_xref="CDD:460256"
     CDS             1..1972
                     /gene="MYH11"
                     /coded_by="XM_061152896.1:175..6093"
                     /db_xref="GeneID:133063477"
ORIGIN      
        1 maqkdqlsdd ekflfvdknf innpvaqadw aakklvwvps ekqgfeaasi keekgdeviv
       61 elvengkkvt vgkddiqkmn ppkfskvedm aeltclneas vlhnlreryf sgliytysgl
      121 fcvvvnpykq lpiysekiie mykgkkrhem pphiyaiadt ayrsmlqdre dqsilctges
      181 gagktentkk viqylamvas shkgkkdtsi tgelekqllq anpileafgn aktvkndnss
      241 rfgkfirinf dvtgyivgan ietylleksr airqardert fhifyyliag akekmrndll
      301 legfnnytfl sngfvpipaa qddemfnetv eamaimgfte eeqlsilrvv ssvlqlgniv
      361 fkkerntdqa smpdntaaqk vchlmginvt dftrsiltpr ikvgrdvvqk aqtkeqadfa
      421 vealakatye rlfrwiltrv nkaldkthrq gasflgildi agfeifevns feqlcinytn
      481 eklqqlfnht mfileqeeyq regiewnfid fgldlqpcie lierpnnppg vlalldeecw
      541 fpkatdksfv eklcseqgsh pkfqkpkqlk dktefsiihy agkvdynasa wltknmdpln
      601 dnvtsllnas sdkfvadlwk dvdrivgldq makmtesslp sasktkkgmf rtvgqlykeq
      661 lgklmttlrn ttpnfvrcii pnhekrsgkl daflvleqlr cngvlegiri crqgfpnriv
      721 fqefrqryei laanaipkgf mdgkqacilm ikaleldpnl yrigqskiff rtgvlahlee
      781 erdlkitdvi mafqamcrgy larkafakrq qqltamkviq rncaaylklr nwqwwrlftk
      841 vkpllqvtrq eeemqakede lqktkerqqk aeselkeleq khsqlteekn llqeqlqaet
      901 elyaeaeemr vrlaakkqel eeilhemear leeeedrgqq lqaerkkmaq qmldleeqle
      961 eeeaarqklq lekvtaeaki kkleddilvm ddqnnklske rklleerisd lttnlaeeee
     1021 kaknltklkn khesmisele vrlkkeeksr qeleklkrkl dgeasdlheq iaelqaqiae
     1081 lkmqlakkee elqaalgrld demaqknnal kkireleghi sdlqedldse raarnkaekq
     1141 krdlgeelea lkteledtld staaqqelra kreqevtmlk kaldeetrsh ecqvqemrqk
     1201 htqvveelte qleqfkraka nldknkqale kenadlsgel rvlsqakqev ehkkkklevq
     1261 lqelqskysd gervraelnd kvhklqneve svtgmlneae gkaiklakdv aslgsqlqdt
     1321 qellqeetrq klnvstklrq ledernslqe qldeemeakq nlerhistln iqlsdskkkl
     1381 qdfastvefl eegkkkfqke iegltqqyee kaaaydklek tknrlqqeld dlvvdldnqr
     1441 qlvsnlekkq kkfdqllaee knisskyade rdraeaeare ketkalslar aleealeake
     1501 elertnkmlk aemedlvssk ddvgknvhel ekskraletq meemktqlee ledelqated
     1561 aklrlevnmq alkvqferdl qardeqneek rrqlqrqlhe yetelederk qralavaakk
     1621 klegdlkdle lqadsavkgr eeaikqlrkl qaqmkdfqre ledartsrde ifatakenek
     1681 kaksleadlm qlqedlaaae rarkqadlek delaeelass vsgrntlqde krrleariaq
     1741 leeeleeeqg nteamsdrvr katqqaeqls nelatersta qknenarqql erqnkelrsk
     1801 lqemegavks kfkstiaale akiaqleeqv eqearekqaa akslkqkdkk lkeallqved
     1861 erkmaeqyke qaekgnvrvr qlkrqleeae eesqrinanr rklqreldea tesneamgre
     1921 vtalksklrr gnetsfvptr rsggrrvien adgseeemda rdadfngtka se
//
LOCUS       XP_061008880            1945 aa            linear   MAM 02-DEC-2023
DEFINITION  myosin-11 isoform X3 [Dama dama].
ACCESSION   XP_061008880
VERSION     XP_061008880.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152897.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1945
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1945
                     /product="myosin-11 isoform X3"
                     /calculated_mol_wt=224501
     Region          31..76
                     /region_name="Myosin_N"
                     /note="Myosin N-terminal SH3-like domain; pfam02736"
                     /db_xref="CDD:460670"
     Region          99..778
                     /region_name="MYSc_class_II"
                     /note="class II myosins, motor domain; cd01377"
                     /db_xref="CDD:276951"
     Site            order(126..134,178..185,238..248,466..471)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276951"
     Site            126..134
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276951"
     Site            178..185
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276951"
     Site            238..248
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276951"
     Site            466..471
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276951"
     Site            495..518
                     /site_type="other"
                     /note="relay loop"
                     /db_xref="CDD:276951"
     Site            710..719
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276951"
     Site            order(722..738,767..778)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276951"
     Region          855..1935
                     /region_name="Myosin_tail_1"
                     /note="Myosin tail; pfam01576"
                     /db_xref="CDD:460256"
     CDS             1..1945
                     /gene="MYH11"
                     /coded_by="XM_061152897.1:175..6012"
                     /db_xref="GeneID:133063477"
ORIGIN      
        1 maqkdqlsdd ekflfvdknf innpvaqadw aakklvwvps ekqgfeaasi keekgdeviv
       61 elvengkkvt vgkddiqkmn ppkfskvedm aeltclneas vlhnlreryf sgliytysgl
      121 fcvvvnpykq lpiysekiie mykgkkrhem pphiyaiadt ayrsmlqdre dqsilctges
      181 gagktentkk viqylamvas shkgkkdtsi tqgpsfayge lekqllqanp ileafgnakt
      241 vkndnssrfg kfirinfdvt gyivganiet ylleksrair qardertfhi fyyliagake
      301 kmrndllleg fnnytflsng fvpipaaqdd emfnetveam aimgfteeeq lsilrvvssv
      361 lqlgnivfkk erntdqasmp dntaaqkvch lmginvtdft rsiltprikv grdvvqkaqt
      421 keqadfavea lakatyerlf rwiltrvnka ldkthrqgas flgildiagf eifevnsfeq
      481 lcinytnekl qqlfnhtmfi leqeeyqreg iewnfidfgl dlqpcielie rpnnppgvla
      541 lldeecwfpk atdksfvekl cseqgshpkf qkpkqlkdkt efsiihyagk vdynasawlt
      601 knmdplndnv tsllnassdk fvadlwkdvd rivgldqmak mtesslpsas ktkkgmfrtv
      661 gqlykeqlgk lmttlrnttp nfvrciipnh ekrsgkldaf lvleqlrcng vlegiricrq
      721 gfpnrivfqe frqryeilaa naipkgfmdg kqacilmika leldpnlyri gqskiffrtg
      781 vlahleeerd lkitdvimaf qamcrgylar kafakrqqql tamkviqrnc aaylklrnwq
      841 wwrlftkvkp llqvtrqeee mqakedelqk tkerqqkaes elkeleqkhs qlteeknllq
      901 eqlqaetely aeaeemrvrl aakkqeleei lhemearlee eedrgqqlqa erkkmaqqml
      961 dleeqleeee aarqklqlek vtaeakikkl eddilvmddq nnklskerkl leerisdltt
     1021 nlaeeeekak nltklknkhe smiselevrl kkeeksrqel eklkrkldge asdlheqiae
     1081 lqaqiaelkm qlakkeeelq aalgrlddem aqknnalkki releghisdl qedldseraa
     1141 rnkaekqkrd lgeelealkt eledtldsta aqqelrakre qevtmlkkal deetrshecq
     1201 vqemrqkhtq vveelteqle qfkrakanld knkqaleken adlsgelrvl sqakqevehk
     1261 kkklevqlqe lqskysdger vraelndkvh klqnevesvt gmlneaegka iklakdvasl
     1321 gsqlqdtqel lqeetrqkln vstklrqled ernslqeqld eemeakqnle rhistlniql
     1381 sdskkklqdf astvefleeg kkkfqkeieg ltqqyeekaa aydklektkn rlqqelddlv
     1441 vdldnqrqlv snlekkqkkf dqllaeekni sskyaderdr aeaeareket kalslarale
     1501 ealeakeele rtnkmlkaem edlvsskddv gknvheleks kraletqmee mktqleeled
     1561 elqatedakl rlevnmqalk vqferdlqar deqneekrrq lqrqlheyet elederkqra
     1621 lavaakkkle gdlkdlelqa dsavkgreea ikqlrklqaq mkdfqreled artsrdeifa
     1681 takenekkak sleadlmqlq edlaaaerar kqadlekdel aeelassvsg rntlqdekrr
     1741 leariaqlee eleeeqgnte amsdrvrkat qqaeqlsnel aterstaqkn enarqqlerq
     1801 nkelrsklqe megavkskfk stiaaleaki aqleeqveqe arekqaaaks lkqkdkklke
     1861 allqvederk maeqykeqae kgnvrvrqlk rqleeaeees qrinanrrkl qreldeates
     1921 neamgrevta lksklrgplp qeapq
//
LOCUS       XP_061008881             346 aa            linear   MAM 02-DEC-2023
DEFINITION  nuclear distribution protein nudE homolog 1 isoform X1 [Dama dama].
ACCESSION   XP_061008881
VERSION     XP_061008881.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152898.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..346
                     /product="nuclear distribution protein nudE homolog 1
                     isoform X1"
                     /calculated_mol_wt=38460
     Region          <26..>186
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          134..297
                     /region_name="NUDE_C"
                     /note="NUDE protein, C-terminal conserved region;
                     pfam04880"
                     /db_xref="CDD:461464"
     CDS             1..346
                     /gene="NDE1"
                     /coded_by="XM_061152898.1:127..1167"
                     /db_xref="GeneID:133063478"
ORIGIN      
        1 madsgktfss eeeeanywkd lamtykqrae ntqeelrefq eesreyeael etqlqqtesk
       61 nrdllmennh lrmeletike kfktqhsegy rqisaleddl aqtkaikdkl qkyireleqa
      121 nddlerakra timsledfeq rlnqaierna fleseldeke nllesvqrlk deardlrqel
      181 avqqkqekpr tpmpssvdae ridtavqatg svpstpiahr gpssslntpg alrrglddsa
      241 ggtpltpaar isalnivgdl lrkvgalesk lascrnfvyd qspsrasgpa sgrgsknrds
      301 vdrrpggssv plgdkglgkr lefgkppssv sspslpsaqg vvkmll
//
LOCUS       XP_061008882             319 aa            linear   MAM 02-DEC-2023
DEFINITION  nuclear distribution protein nudE homolog 1 isoform X2 [Dama dama].
ACCESSION   XP_061008882
VERSION     XP_061008882.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152899.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..319
                     /product="nuclear distribution protein nudE homolog 1
                     isoform X2"
                     /calculated_mol_wt=35781
     Region          <26..>186
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          134..297
                     /region_name="NUDE_C"
                     /note="NUDE protein, C-terminal conserved region;
                     pfam04880"
                     /db_xref="CDD:461464"
     CDS             1..319
                     /gene="NDE1"
                     /coded_by="XM_061152899.1:127..1086"
                     /db_xref="GeneID:133063478"
ORIGIN      
        1 madsgktfss eeeeanywkd lamtykqrae ntqeelrefq eesreyeael etqlqqtesk
       61 nrdllmennh lrmeletike kfktqhsegy rqisaleddl aqtkaikdkl qkyireleqa
      121 nddlerakra timsledfeq rlnqaierna fleseldeke nllesvqrlk deardlrqel
      181 avqqkqekpr tpmpssvdae ridtavqatg svpstpiahr gpssslntpg alrrglddsa
      241 ggtpltpaar isalnivgdl lrkvgalesk lascrnfvyd qspsrasgpa sgrgsknrds
      301 vdrrpggssv plgdkgreq
//
LOCUS       XP_061008884             174 aa            linear   MAM 02-DEC-2023
DEFINITION  centrosomal protein 20 isoform X1 [Dama dama].
ACCESSION   XP_061008884
VERSION     XP_061008884.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152901.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..174
                     /product="centrosomal protein 20 isoform X1"
                     /calculated_mol_wt=19630
     Region          43..113
                     /region_name="LisH_2"
                     /note="cl29685"
                     /db_xref="CDD:475244"
     CDS             1..174
                     /gene="CEP20"
                     /coded_by="XM_061152901.1:52..576"
                     /db_xref="GeneID:133063479"
ORIGIN      
        1 matvaelkav lkdtlekrgv lghlkarira evfnalddes eprpslshen flinelirey
       61 lefnkykyta svliaesgqp vvpldrqfli helnafedsk dntipllygi lahflhgtkd
      121 dnqntflkgs sfqppnpnlg rqpsgrkqme dhlrkeqgrg tdtenlhtsp svkr
//
LOCUS       XP_061008885             115 aa            linear   MAM 02-DEC-2023
DEFINITION  centrosomal protein 20 isoform X2 [Dama dama].
ACCESSION   XP_061008885
VERSION     XP_061008885.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152902.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..115
                     /product="centrosomal protein 20 isoform X2"
                     /calculated_mol_wt=12829
     Region          43..109
                     /region_name="LisH_2"
                     /note="cl29685"
                     /db_xref="CDD:475244"
     CDS             1..115
                     /gene="CEP20"
                     /coded_by="XM_061152902.1:52..399"
                     /db_xref="GeneID:133063479"
ORIGIN      
        1 matvaelkav lkdtlekrgv lghlkarira evfnalddes eprpslshen flinelirey
       61 lefnkykyta svliaesgqp vvpldrqfli helnafedsk dntirplaeg agegh
//
LOCUS       XP_061008886            1222 aa            linear   MAM 02-DEC-2023
DEFINITION  BOS complex subunit NOMO1 [Dama dama].
ACCESSION   XP_061008886
VERSION     XP_061008886.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152903.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1222
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1222
                     /product="BOS complex subunit NOMO1"
                     /calculated_mol_wt=133961
     Region          102..>479
                     /region_name="ClfA"
                     /note="Clumping factor A-related surface protein, MSCRAMM
                     (microbial surface components recognizing adhesive matrix
                     molecules) family, DEv-IgG fold [Cell
                     wall/membrane/envelope biogenesis]; COG4932"
                     /db_xref="CDD:443959"
     Region          <811..>1011
                     /region_name="ClfA"
                     /note="Clumping factor A-related surface protein, MSCRAMM
                     (microbial surface components recognizing adhesive matrix
                     molecules) family, DEv-IgG fold [Cell
                     wall/membrane/envelope biogenesis]; COG4932"
                     /db_xref="CDD:443959"
     CDS             1..1222
                     /gene="LOC133063480"
                     /coded_by="XM_061152903.1:86..3754"
                     /db_xref="GeneID:133063480"
ORIGIN      
        1 mrgrramgpp glavvaatvl lllsavepar gsedivvgcg gfvksdvein yslieiklyt
       61 khgtlkyqtd capnngyfmi plydkgdfil kiepplgwsf epttvelyvd gvsdictkgg
      121 dinfvftgfs vngkvlskgq plgpagvqvs lrntgteaki qstvtqpggk faffkvlpgd
      181 yeilathptw plkeasttvr vtnsnanaag plivagynvs gsvrsdgepm kgvkfllfss
      241 lvakedvlgc nlspvpgfqt qdesleylch avsredgsfs ffslpsggyt vipfyrgeri
      301 tfdvapsrld ftvehdslki epvfhvmgfs vtgrvlngpe gegvpdavvt lnnqikvktk
      361 adgsfrleni ttgtytihaq kehlyfetvt ikiapntpql adiiatgfsv cgqisiirfp
      421 davkqmskyk vvlasqdkdk slvtvetdaq gsfcfkakpg tykvqvmvpe aetragltlk
      481 pqmlllavtd rpvmdvafvq flasvsgkvs cldtcgdllv tlqslsrqge krslqlsgkv
      541 nsmtfmfdnv lpgkykisil hedwcwknks levevleddv pavefrqtgy mlrcslshai
      601 tlefyqdgng penvgiynls kgvnrfclsk pgvykvtprs chrfeqafyt ydtsspsilt
      661 ltairhhvlg tittdkmmdv tvtikssids epalvlgplk svqelrreqq laeiesrrqe
      721 reksgeeags egrtkppvqe mvdelqgpfs ydfsywarsg ekitvtpssk ellfyppsme
      781 atisgescpg klieiqgkag lflegqihpe legveivise kgassplitv ftddkgaysv
      841 gplhsdleyt vssqkegyvl tavegtigdf kayalagvsf eikaeddqpl pgvllslsgg
      901 vfrsnlltqd ngiltfsnls pgqyyfkpmm kefrfepssq mievqegqnl kititgyrta
      961 yscygtvssl ngepeqgvav eavgqsdcsi ygedtvtdee gkfrlrgllp gcvyhvqlka
     1021 egndhieral phhrvivvgn ndiddvniiv frqinqfdls gnvitsseyl ptlwvklyks
     1081 dnldnpiqtv slgqslffhf ppllrdgqny vvlldstlpr sqydfvlpqv sftaagyhkh
     1141 itlvfnptrk lpeqdiaqgs yialpltllv llagynhdkl iplllqltsr lqgvralgqt
     1201 asdnsgpeda krqakkqktr rt
//
LOCUS       XP_061008887            1530 aa            linear   MAM 02-DEC-2023
DEFINITION  multidrug resistance-associated protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061008887
VERSION     XP_061008887.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152904.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1530
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1530
                     /product="multidrug resistance-associated protein 1
                     isoform X1"
                     /calculated_mol_wt=171109
     Region          7..1529
                     /region_name="MRP_assoc_pro"
                     /note="multi drug resistance-associated protein (MRP);
                     TIGR00957"
                     /db_xref="CDD:188098"
     CDS             1..1530
                     /gene="ABCC1"
                     /coded_by="XM_061152904.1:62..4654"
                     /db_xref="GeneID:133063481"
ORIGIN      
        1 malqdfcsvd gsdpfwewnv twntsnpdft kcfqntvlvw vpcsylwvcf pfysvylshh
       61 drgyiqmthl nkaktalgfl lwivcwadlf ysfwersvgk llapvflvsp tllgvtmlla
      121 tfliqierrr gvqssgimlt fwliallcal vilrskimta lkedaqvdvf rdvtfyiyfs
      181 lvliqlvlsc fsdcsplfse tvndpnpcpe ssasflsrit fwwitgmmvq gyrqplestd
      241 lwslnkedms eqvvpvlvkn wkkecaksrk qpvkivyssk dptkpkgssk vdvneeaeal
      301 ivkspqkerd pslfkvlykt fgpyflmsfl fkavhdlmmf agpeilklli nfvndkkapd
      361 wqgyfytall fvsaclqtlv lhqyfhicfv sgmriktavi gavyrkalvi tnaarktstv
      421 geivnlmsvd aqrfmdlaty inmiwsaplq vilalyllwl nlgpsvlagv avmilmvpln
      481 avmamktkty qvahmkskdn riklmneiln gikvlklyaw elafkdkvla irqeelkvlk
      541 ksaylaavgt ftwvctpflv alstfavyvt vdennildaq kafvslalfn ilrfplnilp
      601 mvissivqas vslkrlrvfl sheeldpdsi qrrpikdaga tnsitvknat ftwarndppt
      661 lhgitfsvpe gslvavvgqv gcgkssllsa llaemdkveg hvtvkgsvay vpqqawiqnv
      721 slrenilfgr qlqeryykav ieacallpdl eilpsgdrte igekgvnlsg gqkqrvslar
      781 avycdsdvyl lddplsavda hvgkhifenv vgprgllknk trllvthgis ylpqmdfiiv
      841 msggkisemg syqellardg afaeflrtya saeqeqgqad dglagvggpg kevkqmengm
      901 lvtdtagkqm qrqlsssssy ggdvsrhhts taelqkpgpt edtwklvead kaqtgqvkls
      961 vywdymkaig lfisflsifl flcnhvasla snywlslwtd dpivngtqeh tqvrlsvyga
     1021 lgisqgisvf gysmavsigg ilasrrlhld llhnvlrspi sffertpsgn lvnrfskeld
     1081 tvdsmipqvi kmfmgslfnv igaciiilla tpmaaviipp lgliyffvqr fyvassrqlk
     1141 rlesvsrspv yshfnetllg vsvirafeeq erfirqsdlk vdenqkayyp sivanrwlav
     1201 rlecvgnciv lfaslfavis rhslsaglvg lsvsyslqvt tylnwlvrms semetnivav
     1261 erlkeysete keapwqiqdm appsdwpqvg rvefrdyglr yredldlvlk hinvtidgge
     1321 kvgivgrtga gkssltlglf rinesaegei iiddiniaei glhdlrfkit iipqdpvlfs
     1381 gslrmnldpf sqysdeevwt slelahlkgf vsalpdklnh ecaeggenls vgqrqlvcla
     1441 rallrktkil vldeataavd letddliqst irtqfddctv ltiahrlnti mdytrvivld
     1501 kgevrewgsp sdllqrrgvf ysmakdaglv
//
LOCUS       XP_061008888            1471 aa            linear   MAM 02-DEC-2023
DEFINITION  multidrug resistance-associated protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061008888
VERSION     XP_061008888.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152905.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1471
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1471
                     /product="multidrug resistance-associated protein 1
                     isoform X2"
                     /calculated_mol_wt=164008
     Region          17..1470
                     /region_name="MRP_assoc_pro"
                     /note="multi drug resistance-associated protein (MRP);
                     TIGR00957"
                     /db_xref="CDD:188098"
     CDS             1..1471
                     /gene="ABCC1"
                     /coded_by="XM_061152905.1:62..4477"
                     /db_xref="GeneID:133063481"
ORIGIN      
        1 malqdfcsvd gsdpfwalgf llwivcwadl fysfwersvg kllapvflvs ptllgvtmll
       61 atfliqierr rgvqssgiml tfwliallca lvilrskimt alkedaqvdv frdvtfyiyf
      121 slvliqlvls cfsdcsplfs etvndpnpcp essasflsri tfwwitgmmv qgyrqplest
      181 dlwslnkedm seqvvpvlvk nwkkecaksr kqpvkivyss kdptkpkgss kvdvneeaea
      241 livkspqker dpslfkvlyk tfgpyflmsf lfkavhdlmm fagpeilkll infvndkkap
      301 dwqgyfytal lfvsaclqtl vlhqyfhicf vsgmriktav igavyrkalv itnaarktst
      361 vgeivnlmsv daqrfmdlat yinmiwsapl qvilalyllw lnlgpsvlag vavmilmvpl
      421 navmamktkt yqvahmkskd nriklmneil ngikvlklya welafkdkvl airqeelkvl
      481 kksaylaavg tftwvctpfl valstfavyv tvdennilda qkafvslalf nilrfplnil
      541 pmvissivqa svslkrlrvf lsheeldpds iqrrpikdag atnsitvkna tftwarndpp
      601 tlhgitfsvp egslvavvgq vgcgksslls allaemdkve ghvtvkgsva yvpqqawiqn
      661 vslrenilfg rqlqeryyka vieacallpd leilpsgdrt eigekgvnls ggqkqrvsla
      721 ravycdsdvy llddplsavd ahvgkhifen vvgprgllkn ktrllvthgi sylpqmdfii
      781 vmsggkisem gsyqellard gafaeflrty asaeqeqgqa ddglagvggp gkevkqmeng
      841 mlvtdtagkq mqrqlsssss yggdvsrhht staelqkpgp tedtwklvea dkaqtgqvkl
      901 svywdymkai glfisflsif lflcnhvasl asnywlslwt ddpivngtqe htqvrlsvyg
      961 algisqgisv fgysmavsig gilasrrlhl dllhnvlrsp isffertpsg nlvnrfskel
     1021 dtvdsmipqv ikmfmgslfn vigaciiill atpmaaviip plgliyffvq rfyvassrql
     1081 krlesvsrsp vyshfnetll gvsvirafee qerfirqsdl kvdenqkayy psivanrwla
     1141 vrlecvgnci vlfaslfavi srhslsaglv glsvsyslqv ttylnwlvrm ssemetniva
     1201 verlkeyset ekeapwqiqd mappsdwpqv grvefrdygl ryredldlvl khinvtidgg
     1261 ekvgivgrtg agkssltlgl frinesaege iiiddiniae iglhdlrfki tiipqdpvlf
     1321 sgslrmnldp fsqysdeevw tslelahlkg fvsalpdkln hecaeggenl svgqrqlvcl
     1381 arallrktki lvldeataav dletddliqs tirtqfddct vltiahrlnt imdytrvivl
     1441 dkgevrewgs psdllqrrgv fysmakdagl v
//
LOCUS       XP_061008889            1504 aa            linear   MAM 02-DEC-2023
DEFINITION  ATP-binding cassette sub-family C member 6 isoform X1 [Dama dama].
ACCESSION   XP_061008889
VERSION     XP_061008889.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152906.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1504
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1504
                     /product="ATP-binding cassette sub-family C member 6
                     isoform X1"
                     /calculated_mol_wt=164712
     Region          14..1503
                     /region_name="MRP_assoc_pro"
                     /note="multi drug resistance-associated protein (MRP);
                     TIGR00957"
                     /db_xref="CDD:188098"
     CDS             1..1504
                     /gene="ABCC6"
                     /coded_by="XM_061152906.1:96..4610"
                     /db_xref="GeneID:133063482"
ORIGIN      
        1 magpgepcag pgvwnqtepe paaarllslc flktagvwvp pmylwvlgpi hllyihrhdk
       61 gyiqmsrlfk akmvfgfalv ilcissvsvt lwriqqgtpq aleflihptv wlttmsfavf
      121 lihaerkkgv qasgvlfgyw llcflfpats atqqasqgdf qsdpfrhlsd ylylslvmaq
      181 falscladqa plfpkrppqa npcpksgasf pskamfwwvs glvwkgyrrp lgpkdlwslg
      241 senssgelvs qlekewtrnr satprhtkat afkrkgsgnk eapetetllq qqrgkrgpll
      301 raiwqvgrst fllgtlsliv sdvfrftvpk llslflefig dpntpawkgy llavlmflsa
      361 clqtlfeqqh myrlkvlqmr lrtavtglvy rkvlalssss rkssavgdvv nlvsvdvqrl
      421 tesvtylngl wlplvwiivc fvylwqllgp saltaiavfv sllplnffit kkrnhhqeeq
      481 mrqkdcrarl tscilrnvrt vkyhgwegaf ldrvlhiraq elgalktssl lfsvslvsfq
      541 vstflvalvv favhtlvaee namdaekafv tltvlnilnk aqaflpfsih svvqarvsfd
      601 rlaaflslee tdpgavdssp srcaagedci riqegtfaws qesapclhri nltvpqgcll
      661 avvgpvgagk ssllsallge lakvegsvsi kgpvayvpqe awvqnmsvvd nvcfgqelda
      721 pwletvleac alwpdvdgfp agvhtrtgeq gmnlsggqkq rlslaravyr kadvyllddp
      781 laaldacvgq hvfnqvigpd gllrgttril vthalhilpq adwivvledg aiaemgsfqe
      841 llhrkgalvg lldgarqpgd ggegeaeppa sakdprgsaa ggrpeggser fmklvpekds
      901 aaseaqtglp lddperpgwp kgedrtqygr vkaamyltyl ravgtplcly alflflcqqv
      961 asfcrgywls lwaddptmdg rqthaalrgw vfgllgclqa iglfasmatv llggirassl
     1021 lfqgllwdva rspigffert pignllnrfs ketdivdvdi pdklrsllmy afgllevglv
     1081 vtvttplavv ailpllllya gfqslyvass cqlrrlesar yscvcshvae tfqggpvvra
     1141 frvqgpfvaq ndahvdesqr vsfprlvadr wlaanlelvg nglvfvaalc avlskahlsp
     1201 glvgfsvsaa lqvtqtlqwa vrswtdless ivsverlkdy aqtpkeapwk pltcaahppw
     1261 prrgqiefrd fglryrpelp lavrgvsfki hagekvgivg rtgagkssla ggllrlveaa
     1321 eggiwidgvp iaqvglhtlr sritiipqdp ilfpgslrmn ldmlhehtde aiwevlemvq
     1381 lraavaslpg qlhyecadqg nnlsvgqkql lclarallrk tqilildeam aavdpgterq
     1441 mqaalgswfa qctvlliahr lrsvldcarv lvmdegqvae sgspaqllaq kglfyrlaqe
     1501 sglv
//
LOCUS       XP_061008890            1470 aa            linear   MAM 02-DEC-2023
DEFINITION  ATP-binding cassette sub-family C member 6 isoform X2 [Dama dama].
ACCESSION   XP_061008890
VERSION     XP_061008890.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152907.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1470
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1470
                     /product="ATP-binding cassette sub-family C member 6
                     isoform X2"
                     /calculated_mol_wt=161069
     Region          14..1466
                     /region_name="MRP_assoc_pro"
                     /note="multi drug resistance-associated protein (MRP);
                     TIGR00957"
                     /db_xref="CDD:188098"
     CDS             1..1470
                     /gene="ABCC6"
                     /coded_by="XM_061152907.1:96..4508"
                     /db_xref="GeneID:133063482"
ORIGIN      
        1 magpgepcag pgvwnqtepe paaarllslc flktagvwvp pmylwvlgpi hllyihrhdk
       61 gyiqmsrlfk akmvfgfalv ilcissvsvt lwriqqgtpq aleflihptv wlttmsfavf
      121 lihaerkkgv qasgvlfgyw llcflfpats atqqasqgdf qsdpfrhlsd ylylslvmaq
      181 falscladqa plfpkrppqa npcpksgasf pskamfwwvs glvwkgyrrp lgpkdlwslg
      241 senssgelvs qlekewtrnr satprhtkat afkrkgsgnk eapetetllq qqrgkrgpll
      301 raiwqvgrst fllgtlsliv sdvfrftvpk llslflefig dpntpawkgy llavlmflsa
      361 clqtlfeqqh myrlkvlqmr lrtavtglvy rkvlalssss rkssavgdvv nlvsvdvqrl
      421 tesvtylngl wlplvwiivc fvylwqllgp saltaiavfv sllplnffit kkrnhhqeeq
      481 mrqkdcrarl tscilrnvrt vkyhgwegaf ldrvlhiraq elgalktssl lfsvslvsfq
      541 vstflvalvv favhtlvaee namdaekafv tltvlnilnk aqaflpfsih svvqarvsfd
      601 rlaaflslee tdpgavdssp srcaagedci riqegtfaws qesapclhri nltvpqgcll
      661 avvgpvgagk ssllsallge lakvegsvsi kgpvayvpqe awvqnmsvvd nvcfgqelda
      721 pwletvleac alwpdvdgfp agvhtrtgeq gmnlsggqkq rlslaravyr kadvyllddp
      781 laaldacvgq hvfnqvigpd gllrgttril vthalhilpq adwivvledg aiaemgsfqe
      841 llhrkgalvg lldgarqpgd ggegeaeppa sakdprgsaa ggrpeggser fmklvpekds
      901 aaseaqtglp lddperpgwp kgedrtqygr vkaamyltyl ravgtplcly alflflcqqv
      961 asfcrgywls lwaddptmdg rqthaalrgw vfgllgclqa iglfasmatv llggirassl
     1021 lfqgllwdva rspigffert pignllnrfs ketdivdvdi pdklrsllmy afgllevglv
     1081 vtvttplavv ailpllllya gfqslyvass cqlrrlesar yscvcshvae tfqggpvvra
     1141 frvqgpfvaq ndahvdesqr vsfprlvadr wlaanlelvg nglvfvaalc avlskahlsp
     1201 glvgfsvsaa lqvtqtlqwa vrswtdless ivsverlkdy aqtpkeapwk pltcaahppw
     1261 prrgqiefrd fglryrpelp lavrgvsfki hagekvgivg rtgagkssla ggllrlveaa
     1321 eggiwidgvp iaqvglhtlr sritiipqdp ilfpgslrmn ldmlhehtde aiwevlemvq
     1381 lraavaslpg qlhyecadqg nnlsvgqkql lclarallrk tqilildeam aavdpgterq
     1441 mqaalgswfa qctvlliahr lrsvldcasl
//
LOCUS       XP_061008891            1462 aa            linear   MAM 02-DEC-2023
DEFINITION  ATP-binding cassette sub-family C member 6 isoform X3 [Dama dama].
ACCESSION   XP_061008891
VERSION     XP_061008891.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152908.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1462
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1462
                     /product="ATP-binding cassette sub-family C member 6
                     isoform X3"
                     /calculated_mol_wt=159932
     Region          14..1461
                     /region_name="MRP_assoc_pro"
                     /note="multi drug resistance-associated protein (MRP);
                     TIGR00957"
                     /db_xref="CDD:188098"
     CDS             1..1462
                     /gene="ABCC6"
                     /coded_by="XM_061152908.1:96..4484"
                     /db_xref="GeneID:133063482"
ORIGIN      
        1 magpgepcag pgvwnqtepe paaarllslc flktagvwvp pmylwvlgpi hllyihrhdk
       61 gyiqmsrlfk akmvfgfalv ilcissvsvt lwriqqgtpq aleflihptv wlttmsfavf
      121 lihaerkkgv qasgvlfgyw llcflfpats atqqasqgnp cpksgasfps kamfwwvsgl
      181 vwkgyrrplg pkdlwslgse nssgelvsql ekewtrnrsa tprhtkataf krkgsgnkea
      241 petetllqqq rgkrgpllra iwqvgrstfl lgtlslivsd vfrftvpkll slflefigdp
      301 ntpawkgyll avlmflsacl qtlfeqqhmy rlkvlqmrlr tavtglvyrk vlalssssrk
      361 ssavgdvvnl vsvdvqrlte svtylnglwl plvwiivcfv ylwqllgpsa ltaiavfvsl
      421 lplnffitkk rnhhqeeqmr qkdcrarlts cilrnvrtvk yhgwegafld rvlhiraqel
      481 galktssllf svslvsfqvs tflvalvvfa vhtlvaeena mdaekafvtl tvlnilnkaq
      541 aflpfsihsv vqarvsfdrl aaflsleetd pgavdsspsr caagedciri qegtfawsqe
      601 sapclhrinl tvpqgcllav vgpvgagkss llsallgela kvegsvsikg pvayvpqeaw
      661 vqnmsvvdnv cfgqeldapw letvleacal wpdvdgfpag vhtrtgeqgm nlsggqkqrl
      721 slaravyrka dvyllddpla aldacvgqhv fnqvigpdgl lrgttrilvt halhilpqad
      781 wivvledgai aemgsfqell hrkgalvgll dgarqpgdgg egeaeppasa kdprgsaagg
      841 rpeggserfm klvpekdsaa seaqtglpld dperpgwpkg edrtqygrvk aamyltylra
      901 vgtplclyal flflcqqvas fcrgywlslw addptmdgrq thaalrgwvf gllgclqaig
      961 lfasmatvll ggirassllf qgllwdvars pigffertpi gnllnrfske tdivdvdipd
     1021 klrsllmyaf gllevglvvt vttplavvai lpllllyagf qslyvasscq lrrlesarys
     1081 cvcshvaetf qggpvvrafr vqgpfvaqnd ahvdesqrvs fprlvadrwl aanlelvgng
     1141 lvfvaalcav lskahlspgl vgfsvsaalq vtqtlqwavr swtdlessiv sverlkdyaq
     1201 tpkeapwkpl tcaahppwpr rgqiefrdfg lryrpelpla vrgvsfkiha gekvgivgrt
     1261 gagksslagg llrlveaaeg giwidgvpia qvglhtlrsr itiipqdpil fpgslrmnld
     1321 mlhehtdeai wevlemvqlr aavaslpgql hyecadqgnn lsvgqkqllc larallrktq
     1381 ilildeamaa vdpgterqmq aalgswfaqc tvlliahrlr svldcarvlv mdegqvaesg
     1441 spaqllaqkg lfyrlaqesg lv
//
LOCUS       XP_061008893            1395 aa            linear   MAM 02-DEC-2023
DEFINITION  ATP-binding cassette sub-family C member 6 isoform X4 [Dama dama].
ACCESSION   XP_061008893
VERSION     XP_061008893.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152910.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1395
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1395
                     /product="ATP-binding cassette sub-family C member 6
                     isoform X4"
                     /calculated_mol_wt=153085
     Region          14..1394
                     /region_name="MRP_assoc_pro"
                     /note="multi drug resistance-associated protein (MRP);
                     TIGR00957"
                     /db_xref="CDD:188098"
     CDS             1..1395
                     /gene="ABCC6"
                     /coded_by="XM_061152910.1:96..4283"
                     /db_xref="GeneID:133063482"
ORIGIN      
        1 magpgepcag pgvwnqtepe paaarllslc flktagvwvp pmylwvlgpi hllyihrhdk
       61 gyiqmsrlfk akmvfgfalv ilcissvsvt lwriqqgtpq aleflihptv wlttmsfavf
      121 lihaerkkgv qasgvlfgyw llcflfpats atqqasqgdf qsdpfrhlsd ylylslvmaq
      181 falscladqa plfpkrppqa npcpksgasf pskamfwwvs glvwkgyrrp lgpkdlwslg
      241 senssgelvs qlekewtrnr satprhtkat afkrkgsgnk eapetetllq qqrgkrgpll
      301 raiwqvgrst fllgtlsliv sdvfrftvpk llslflefig dpntpawkgy llavlmflsa
      361 clqtlfeqqh myrlkvlqmr lrtavtglvy rkvlalssss rkssavgdvv nlvsvdvqrl
      421 tesvtylngl wlplvwiivc fvylwqllgp saltaiavfv sllplnffit kkrnhhqeeq
      481 mrqkdcrarl tscilrnvrt vkyhgwegaf ldrvlhiraq elgalktssl lfsvslvsfq
      541 vstflvalvv favhtlvaee namdaekafv tltvlnilnk aqaflpfsih svvqarvsfd
      601 rlaaflslee tdpgavdssp srcaagedci riqegtfaws qesapclhri nltvpqgcll
      661 avvgpvgagk ssllsallge lakvegsvsi kgpvayvpqe awvqnmsvvd nvcfgqelda
      721 pwletvleac alwpdvdgfp agvhtrtgeq gmnlsggqkq rlslaravyr kadvyllddp
      781 laaldacvgq hvfnqvigpd gllrgttril vthalhilpq adwivvledg aiaemgsfqe
      841 llhrkgalvg lldgarqpgd ggegeaeppa sakdprgsaa ggrpeggser fmklvpekds
      901 aaseaqtglp lddperpgwp kgedrtqygr vkaamyltyl ravgtplcly alflflcqqv
      961 asfcrgywls lwaddptmdg rqthaalrgw vfgllgclqa iglfasmatv llggirassl
     1021 lfqgllwdva rspigffert pignllnrfs ketdivdvdi pdklrsllmy afgllevglv
     1081 vtvttplavv ailpllllya gfqvtqtlqw avrswtdles sivsverlkd yaqtpkeapw
     1141 kpltcaahpp wprrgqiefr dfglryrpel plavrgvsfk ihagekvgiv grtgagkssl
     1201 aggllrlvea aeggiwidgv piaqvglhtl rsritiipqd pilfpgslrm nldmlhehtd
     1261 eaiwevlemv qlraavaslp gqlhyecadq gnnlsvgqkq llclarallr ktqilildea
     1321 maavdpgter qmqaalgswf aqctvlliah rlrsvldcar vlvmdegqva esgspaqlla
     1381 qkglfyrlaq esglv
//
LOCUS       XP_061008894            1386 aa            linear   MAM 02-DEC-2023
DEFINITION  ATP-binding cassette sub-family C member 6 isoform X5 [Dama dama].
ACCESSION   XP_061008894
VERSION     XP_061008894.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152911.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1386
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1386
                     /product="ATP-binding cassette sub-family C member 6
                     isoform X5"
                     /calculated_mol_wt=151132
     Region          14..1297
                     /region_name="MRP_assoc_pro"
                     /note="multi drug resistance-associated protein (MRP);
                     TIGR00957"
                     /db_xref="CDD:188098"
     CDS             1..1386
                     /gene="ABCC6"
                     /coded_by="XM_061152911.1:96..4256"
                     /db_xref="GeneID:133063482"
ORIGIN      
        1 magpgepcag pgvwnqtepe paaarllslc flktagvwvp pmylwvlgpi hllyihrhdk
       61 gyiqmsrlfk akmvfgfalv ilcissvsvt lwriqqgtpq aleflihptv wlttmsfavf
      121 lihaerkkgv qasgvlfgyw llcflfpats atqqasqgdf qsdpfrhlsd ylylslvmaq
      181 falscladqa plfpkrppqa npcpksgasf pskamfwwvs glvwkgyrrp lgpkdlwslg
      241 senssgelvs qlekewtrnr satprhtkat afkrkgsgnk eapetetllq qqrgkrgpll
      301 raiwqvgrst fllgtlsliv sdvfrftvpk llslflefig dpntpawkgy llavlmflsa
      361 clqtlfeqqh myrlkvlqmr lrtavtglvy rkvlalssss rkssavgdvv nlvsvdvqrl
      421 tesvtylngl wlplvwiivc fvylwqllgp saltaiavfv sllplnffit kkrnhhqeeq
      481 mrqkdcrarl tscilrnvrt vkyhgwegaf ldrvlhiraq elgalktssl lfsvslvsfq
      541 vstflvalvv favhtlvaee namdaekafv tltvlnilnk aqaflpfsih svvqarvsfd
      601 rlaaflslee tdpgavdssp srcaagedci riqegtfaws qesapclhri nltvpqgcll
      661 avvgpvgagk ssllsallge lakvegsvsi kgpvayvpqe awvqnmsvvd nvcfgqelda
      721 pwletvleac alwpdvdgfp agvhtrtgeq gmnlsggqkq rlslaravyr kadvyllddp
      781 laaldacvgq hvfnqvigpd gllrgttril vthalhilpq adwivvledg aiaemgsfqe
      841 llhrkgalvg lldgarqpgd ggegeaeppa sakdprgsaa ggrpeggser fmklvpekds
      901 aaseaqtglp lddperpgwp kgedrtqygr vkaamyltyl ravgtplcly alflflcqqv
      961 asfcrgywls lwaddptmdg rqthaalrgw vfgllgclqa iglfasmatv llggirassl
     1021 lfqgllwdva rspigffert pignllnrfs ketdivdvdi pdklrsllmy afgllevglv
     1081 vtvttplavv ailpllllya gfqslyvass cqlrrlesar yscvcshvae tfqggpvvra
     1141 frvqgpfvaq ndahvdesqr vsfprlvadr wlaanlelvg nglvfvaalc avlskahlsp
     1201 glvgfsvsaa lqvtqtlqwa vrswtdless ivsverlkdy aqtpkeapwk pltcaahppw
     1261 prrgqiefrd fglryrpelp lavrgvsfki hagekcgpea apvfgtcssp enpdphsgrg
     1321 hgccgprdra pdagrpgelv cavhstahcp ppalcaglcq gsghgrgagg rewqpgpaag
     1381 pegpvl
//
LOCUS       XP_061008895            1370 aa            linear   MAM 02-DEC-2023
DEFINITION  ATP-binding cassette sub-family C member 6 isoform X6 [Dama dama].
ACCESSION   XP_061008895
VERSION     XP_061008895.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152912.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1370
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1370
                     /product="ATP-binding cassette sub-family C member 6
                     isoform X6"
                     /calculated_mol_wt=149702
     Region          14..1297
                     /region_name="MRP_assoc_pro"
                     /note="multi drug resistance-associated protein (MRP);
                     TIGR00957"
                     /db_xref="CDD:188098"
     CDS             1..1370
                     /gene="ABCC6"
                     /coded_by="XM_061152912.1:96..4208"
                     /db_xref="GeneID:133063482"
ORIGIN      
        1 magpgepcag pgvwnqtepe paaarllslc flktagvwvp pmylwvlgpi hllyihrhdk
       61 gyiqmsrlfk akmvfgfalv ilcissvsvt lwriqqgtpq aleflihptv wlttmsfavf
      121 lihaerkkgv qasgvlfgyw llcflfpats atqqasqgdf qsdpfrhlsd ylylslvmaq
      181 falscladqa plfpkrppqa npcpksgasf pskamfwwvs glvwkgyrrp lgpkdlwslg
      241 senssgelvs qlekewtrnr satprhtkat afkrkgsgnk eapetetllq qqrgkrgpll
      301 raiwqvgrst fllgtlsliv sdvfrftvpk llslflefig dpntpawkgy llavlmflsa
      361 clqtlfeqqh myrlkvlqmr lrtavtglvy rkvlalssss rkssavgdvv nlvsvdvqrl
      421 tesvtylngl wlplvwiivc fvylwqllgp saltaiavfv sllplnffit kkrnhhqeeq
      481 mrqkdcrarl tscilrnvrt vkyhgwegaf ldrvlhiraq elgalktssl lfsvslvsfq
      541 vstflvalvv favhtlvaee namdaekafv tltvlnilnk aqaflpfsih svvqarvsfd
      601 rlaaflslee tdpgavdssp srcaagedci riqegtfaws qesapclhri nltvpqgcll
      661 avvgpvgagk ssllsallge lakvegsvsi kgpvayvpqe awvqnmsvvd nvcfgqelda
      721 pwletvleac alwpdvdgfp agvhtrtgeq gmnlsggqkq rlslaravyr kadvyllddp
      781 laaldacvgq hvfnqvigpd gllrgttril vthalhilpq adwivvledg aiaemgsfqe
      841 llhrkgalvg lldgarqpgd ggegeaeppa sakdprgsaa ggrpeggser fmklvpekds
      901 aaseaqtglp lddperpgwp kgedrtqygr vkaamyltyl ravgtplcly alflflcqqv
      961 asfcrgywls lwaddptmdg rqthaalrgw vfgllgclqa iglfasmatv llggirassl
     1021 lfqgllwdva rspigffert pignllnrfs ketdivdvdi pdklrsllmy afgllevglv
     1081 vtvttplavv ailpllllya gfqslyvass cqlrrlesar yscvcshvae tfqggpvvra
     1141 frvqgpfvaq ndahvdesqr vsfprlvadr wlaanlelvg nglvfvaalc avlskahlsp
     1201 glvgfsvsaa lqvtqtlqwa vrswtdless ivsverlkdy aqtpkeapwk pltcaahppw
     1261 prrgqiefrd fglryrpelp lavrgvsfki hagekcgpea apvfgtcssp enpdphsgrg
     1321 hgccgprdra pdagrpgelv cavhstahcp ppalcaglcq smrslgsqgc
//
LOCUS       XP_061008896             216 aa            linear   MAM 02-DEC-2023
DEFINITION  GTP-binding nuclear protein Ran [Dama dama].
ACCESSION   XP_061008896
VERSION     XP_061008896.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152913.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..216
                     /product="GTP-binding nuclear protein Ran"
                     /calculated_mol_wt=24292
     Region          16..215
                     /region_name="RAN"
                     /note="Ran (Ras-related nuclear proteins) /TC4 subfamily
                     of small GTPases; smart00176"
                     /db_xref="CDD:128473"
     CDS             1..216
                     /gene="LOC133063483"
                     /coded_by="XM_061152913.1:44..694"
                     /db_xref="GeneID:133063483"
ORIGIN      
        1 maaqgepqvq fklvlvgdgg tgkttfvkrh ltgefekkyv atlgvevhpl vfhtnrgpik
       61 fnvwdtagqe kfgglrdgyy iqaqcaiimf dvtsrvtykn vpnwhrdlvr vcenipivlc
      121 gnkvdikdrk vkaksivfhr kknlqyydis aksnynfekp flwlarklig dpnlefvamp
      181 alappevvmd palaaqyehd levaqttalp dedddl
//
LOCUS       XP_061008897             435 aa            linear   MAM 02-DEC-2023
DEFINITION  AP-2 complex subunit mu [Dama dama].
ACCESSION   XP_061008897
VERSION     XP_061008897.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152914.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..435
                     /product="AP-2 complex subunit mu"
                     /calculated_mol_wt=49524
     Region          1..140
                     /region_name="AP2_Mu_N"
                     /note="AP-2 complex subunit mu N-terminal domain; cd14836"
                     /db_xref="CDD:341440"
     Site            order(1,18..19,21..22,45..49,52,54,56,58,60,71..77,79..81,
                     83..84,105,109..110,113..114,117..118,120..123,125,
                     131..132,134..136)
                     /site_type="other"
                     /note="AP2 beta interface [polypeptide binding]"
                     /db_xref="CDD:341440"
     Region          168..434
                     /region_name="AP-2_Mu2_Cterm"
                     /note="C-terminal domain of medium Mu2 subunit in
                     ubiquitously expressed clathrin-associated adaptor protein
                     (AP) complex AP-2; cd09251"
                     /db_xref="CDD:271159"
     Site            order(174..176,203,318,391,393,401..402,420..423,425)
                     /site_type="signal peptide"
                     /note="signal peptide binding site [polypeptide binding]"
                     /db_xref="CDD:271159"
     Site            order(192..193,245..250,254..255,276,278,382,384,430,432)
                     /site_type="other"
                     /note="AP-2 beta subunit interface [polypeptide binding]"
                     /db_xref="CDD:271159"
     CDS             1..435
                     /gene="LOC133063484"
                     /coded_by="XM_061152914.1:117..1424"
                     /db_xref="GeneID:133063484"
ORIGIN      
        1 migglfiynh kgevlisrvy rddigrnavd afrvnvihar qqvrspvtni artsffhvkr
       61 sniwlaavtk qnvnaamvfe flykmcdvma ayfgkiseen iknnfvliye lldeildfgy
      121 pqnsetgalk tfitqqgiks qhqtkeeqsq itsqvtgqig wrregikyrr nelfldvles
      181 vnllmspqgq vlsahvsgrv vmksylsgmp eckfgmndki viekqgkgta detsksgkqs
      241 iaiddctfhq cvrlskfdse rsisfippdg efelmryrtt kdiilpfrvi plvrevgrtk
      301 levkvviksn fkpsllaqki evriptplnt sgvqvicmkg kakykasena ivwkikrmag
      361 mkesqisaei ellptndkkk warppismnf evpfapsglk vrylkvfepk lnysdhdvik
      421 wvryigrsgi yetrc
//
LOCUS       XP_061008898             959 aa            linear   MAM 02-DEC-2023
DEFINITION  xylosyltransferase 1 [Dama dama].
ACCESSION   XP_061008898
VERSION     XP_061008898.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152915.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..959
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..959
                     /product="xylosyltransferase 1"
                     /calculated_mol_wt=107394
     Region          328..581
                     /region_name="Branch"
                     /note="Core-2/I-Branching enzyme; cl27418"
                     /db_xref="CDD:452742"
     Region          613..792
                     /region_name="Xylo_C"
                     /note="Xylosyltransferase C terminal; pfam12529"
                     /db_xref="CDD:463618"
     CDS             1..959
                     /gene="XYLT1"
                     /coded_by="XM_061152915.1:1..2880"
                     /db_xref="GeneID:133063485"
ORIGIN      
        1 mvaapcarrl arrshsalla altvlllqtl vvwnfsslds gagerrggaa aggaeqpppa
       61 paprrerrdl paepaaarge gggggggggg rgpparargg gpgapraqqp asrgalasra
      121 ldpqpspvit letqdgyfsh rpkekvrtds nnensvpkdf envdnsnfap raqkqkhqpe
      181 ltkkpprgqk ellkrkreqe ekgrgrpspg kgpnevlppg ervavngshs kdaprlphgr
      241 ksggsspeak pdqplrcdis gkeaisalsr skskhcrqei getycrhklg llmpekvtrf
      301 cplegkankn vqwdedsvey mlanpvriaf vlvvhgrasr qlqrmfkaiy hkdhfyyihv
      361 dkrsnylhrq vlqfarqygn vrvtpwrmat iwggasllst ylqtmrdlle mtdwpwdffi
      421 nlsaadypir tndqlvafls ryrdmnflks hgrdnarfir kqgldrlfle cdahmwrlgd
      481 rripegiavd ggsdwfllnr kfveyvtfst ddlvtkmkqf ysytllpaes ffhtvlensp
      541 hcdtmvdnnl ritnwnrklg ckcqykhivd wcgcspndfk pqdfhrfqqt arptffarkf
      601 eavvsqeiig qldyylygny pagtpglrsy wenvydepdg ihslsdvalt lyhsfsrlgl
      661 rraeaslrap gesscryypm ghpasvhlyf ladrfqgfli khhatnlavs kletletwvm
      721 pkkvfkiasp psdfgrlqfs evgtdwdake rlfrnfggll gpmdepvgmq kwgkgpnvtv
      781 tviwvdpvni iaatydilie staefthykp plnlplrpgv wtvkilhhwv pvaetkflva
      841 pltfsnrqpi kpeealrlhn gplrsaymeq sfqslnpvls lpinpaqveq arrnaasaga
      901 tlerwldslv ggmwtamdic atgpsacpvm qtcsqtawss fspdpkselg avkpdgrlr
//
LOCUS       XP_061008899             212 aa            linear   MAM 02-DEC-2023
DEFINITION  high mobility group protein B1-like [Dama dama].
ACCESSION   XP_061008899
VERSION     XP_061008899.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152916.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..212
                     /product="high mobility group protein B1-like"
                     /calculated_mol_wt=24388
     Region          8..76
                     /region_name="HMG-box_HMGB_rpt1"
                     /note="first high mobility group (HMG)-box found in the
                     high mobility group protein B (HMGB) family; cd21978"
                     /db_xref="CDD:438794"
     Site            order(8..10,13,16..17,19..21,25,28,35..36,38..39,41..43,
                     45..46,50)
                     /site_type="other"
                     /note="p53 binding site [polypeptide binding]"
                     /db_xref="CDD:438794"
     Site            order(8,10..11,13..17,20..21,36,38..39,41..43,46,49)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438794"
     Region          93..163
                     /region_name="HMG-box_HMGB_rpt2"
                     /note="second high mobility group (HMG)-box found in the
                     high mobility group protein B (HMGB) family; cd21979"
                     /db_xref="CDD:438795"
     Site            order(94..100,102..104,106..107,110,122..123,125..127,130,
                     133,152,155..156,159,162..163)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438795"
     CDS             1..212
                     /gene="LOC133063486"
                     /coded_by="XM_061152916.1:101..739"
                     /db_xref="GeneID:133063486"
ORIGIN      
        1 mgkgdpkkpr gkmssyaffv qtcreehkkk hpdasvnfse fskkcserwk tmsakekgkf
       61 edmakadkar yeremktyip pkgetkkkfk dpnapkrpps afflfcseyr pkikgehpgl
      121 sigdvakklg emwnntaand kqpyekkaak lkekyekdia ayrakgkpda akkgvvkaek
      181 skkkkedeed eedeeeeede edeeeeeddd de
//
LOCUS       XP_061008901             130 aa            linear   MAM 02-DEC-2023
DEFINITION  small ribosomal subunit protein uS8 [Dama dama].
ACCESSION   XP_061008901
VERSION     XP_061008901.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152918.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..130
                     /product="small ribosomal subunit protein uS8"
                     /calculated_mol_wt=14708
     Region          1..130
                     /region_name="PTZ00158"
                     /note="40S ribosomal protein S15A; Provisional"
                     /db_xref="CDD:185487"
     CDS             1..130
                     /gene="RPS15A"
                     /coded_by="XM_061152918.1:118..510"
                     /db_xref="GeneID:133063487"
ORIGIN      
        1 mvrmnvlada lksinnaekr gkrqvlirpc skvivrfltv mmkhgyigef eiiddhragk
       61 ivvnltgrln kcgvisprfd vqlkdlekwq nnllpsrqfg fivlttsagi mdheearrkh
      121 tggkilgfff
//
LOCUS       XP_061008902             203 aa            linear   MAM 02-DEC-2023
DEFINITION  ADP-ribosylation factor-like protein 6-interacting protein 1
            isoform X1 [Dama dama].
ACCESSION   XP_061008902
VERSION     XP_061008902.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152919.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..203
                     /product="ADP-ribosylation factor-like protein
                     6-interacting protein 1 isoform X1"
                     /calculated_mol_wt=23254
     Region          34..200
                     /region_name="Arl6IP1"
                     /note="ADP-ribosylation factor-like protein 6-interacting
                     protein 1; cd22559"
                     /db_xref="CDD:411698"
     CDS             1..203
                     /gene="ARL6IP1"
                     /coded_by="XM_061152919.1:116..727"
                     /db_xref="GeneID:133063488"
ORIGIN      
        1 maegdnrstn llaaetasle eqlqgwgevm lmadkvlrwe rawfppaimg vvslvfltiy
       61 yldpsvlsgv scfvmflcla dylvpilapr ifgsnkwtte qqqrfheics nlvktrrrav
      121 gwwkrlftlk eekpkmyfmt mivslaavaw vgqqvhnlll tylivtflll lpglnqhgii
      181 skyigmakre inkllkqkek kne
//
LOCUS       XP_061008903             163 aa            linear   MAM 02-DEC-2023
DEFINITION  ADP-ribosylation factor-like protein 6-interacting protein 1
            isoform X2 [Dama dama].
ACCESSION   XP_061008903
VERSION     XP_061008903.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152920.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..163
                     /product="ADP-ribosylation factor-like protein
                     6-interacting protein 1 isoform X2"
                     /calculated_mol_wt=18758
     Region          34..160
                     /region_name="Arl6IP1"
                     /note="ADP-ribosylation factor-like protein 6-interacting
                     protein 1; cd22559"
                     /db_xref="CDD:411698"
     CDS             1..163
                     /gene="ARL6IP1"
                     /coded_by="XM_061152920.1:116..607"
                     /db_xref="GeneID:133063488"
ORIGIN      
        1 maegdnrstn llaaetasle eqlqgwgevm lmadkvlrwe rawfppaimg vvslvfltte
       61 qqqrfheics nlvktrrrav gwwkrlftlk eekpkmyfmt mivslaavaw vgqqvhnlll
      121 tylivtflll lpglnqhgii skyigmakre inkllkqkek kne
//
LOCUS       XP_061008904            3658 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase SMG1 isoform X1 [Dama dama].
ACCESSION   XP_061008904
VERSION     XP_061008904.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152921.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3658
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3658
                     /product="serine/threonine-protein kinase SMG1 isoform X1"
                     /calculated_mol_wt=409837
     Region          30..138
                     /region_name="SMG1_N"
                     /note="Serine/threonine-protein kinase SMG1 N-terminal;
                     pfam17229"
                     /db_xref="CDD:435799"
     Region          629..1239
                     /region_name="SMG1"
                     /note="Serine/threonine-protein kinase smg-1; pfam15785"
                     /db_xref="CDD:464869"
     Region          2118..2423
                     /region_name="PIKKc_SMG1"
                     /note="Catalytic domain of Suppressor of Morphogenetic
                     effect on Genitalia-1; cd05170"
                     /db_xref="CDD:270714"
     Site            order(2128,2130..2132,2134,2150,2152,2155,2190,2202..2205,
                     2210,2337,2339,2350..2351)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270714"
     Site            2329..2337
                     /site_type="active"
                     /note="catalytic loop [active]"
                     /db_xref="CDD:270714"
     Site            2351..2373
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270714"
     Region          3628..3657
                     /region_name="FATC"
                     /note="FATC domain; pfam02260"
                     /db_xref="CDD:460514"
     CDS             1..3658
                     /gene="SMG1"
                     /coded_by="XM_061152921.1:283..11259"
                     /db_xref="GeneID:133063489"
ORIGIN      
        1 msrrapgsrl ssggggtkyp rswndwqprt dsasadpdnl kysssrdrgg sssyglqpsn
       61 savvsrqrhd dtrihadiqn dekggysvng gsgentygrk slgqelrvnn vtspeftsiq
      121 hgsralaikd mrksqersms ysdesrlsnl lrritreddr drrlatvkql kefiqqpenk
      181 lvlvkqldni laavhdvlne sskllqelrq egacclgllc aslsyeaeki fkwifskfss
      241 sakdevklly lcatykalet vgekkafssv mqlvmtslqs ilenvdtpel lckcvkcill
      301 varcyphifs tnfrdtvdil vgwhidhtqk psltqqvsgw lqslepfwva dlafsttllg
      361 qfledmeaya edlshvasge svdedvppps vslpklaall rvfstvvrsi gerfspirgp
      421 piteayvtdv lyrvmrcvta anqvffseav ltaanecvgv llgsldpsmt ihcdmvityg
      481 ldqlencqtc gtdyiisvln lltliveqin tklpssfvek lfipsskllf lryhkekevv
      541 avahavyqav lslknipvle tayklilgem tcalnnllhs lqlpdacsei kheafknhvf
      601 nvdnakfvvi fdlsalttig naknsligmw alsptvfall sknlmvvhge lavhfpaiqy
      661 avlytlyshc trhdhfisss lsssspslfd gavistvtta tkkhfsiiln llgillkkdn
      721 lnqdtrnllm twalevavlm kksetyaplf slpsfhkfck gllantlved vniclqacss
      781 lhalssslpd dllqrcvdvc rvqlvhsgtr irqafgkllk sipldvvlsn nnhteiqeis
      841 lalrshmska psntfhpqdf sdvisfilyg nshrtgkdnw lerlfyscqr ldkrdqstip
      901 rnllktdavl wqwaiweaaq ftvlsklrtp lgraqdtfqt iegiirslaa htlnpdqdvs
      961 qwttadndeg hssnqlrlvl llqylenlek lmynayegca naltsppkvi rtffytnrqt
     1021 cqdwltrirl simrvgllag qpavtvrhgf dlltemktnp sqgnelevti mmvvealcel
     1081 hcpeaiqgia vwsssvvgkn llwinsvaqq aegrfekasv eyqehlcamt gvdccisgfd
     1141 ksvltlantg rnsaspkhsl ngesrktlls kptdsspevi nylgnkacec yisiadwaav
     1201 qewqnaihdl kkstsstsln lkadfnyiks lssfesgefv ecteqlellp genisllagg
     1261 skekidmkkl lpnmlspdpr elqksievql lrssvclata lnhieqdqkw qsitenvvky
     1321 lkqtsriavg plrlstltvs qslpvlstlq lycssalent vsnrlstedc liplfsealr
     1381 sckqhdvrpw mqalrytmyq sqllekikeq tvpvrshlme lgltaakfar krgnvslatr
     1441 llaqcsevql gktttaqdlv qhfkklstqg qvdekwgpel diektkllyt agqsthamem
     1501 lsscaisfck sakaehavak siltlakwvq aewkeisgql kqvyraqqqq nstglstlsk
     1561 niltlielps vnameeeypr iesestvhig vgepdfilgq lyhlssvqap evakswaala
     1621 swayrwgrkv vdnasqgegv rllpreksev qnllpdtite eekeriygil gqavcrpagi
     1681 qdeditlqit esedneeddm vdviwrqlis scpwlselde sategvikvw rkvvdrifsl
     1741 yklscsayft flklnagqip ldeddprlhl shrveqstdd mivmatlrll rllvkhagel
     1801 rqylehglet tptapwrgii pqlfsrlnhp evyvrqsicn llcrvaqdsp hlilypaivg
     1861 tislssesqa sgnkfssaip tllgniqgee llvseceggs ppasqdsnkd epksglnedq
     1921 ammqdcyski vdklssanpt mvlqvqmlva elrrvtvlwd elwlgvllqq hmyvlrriqq
     1981 ledevkrvqn nntlrkeeki aimrekhtal mkpivfaleh vrsitaapae tphekwfqdn
     2041 ygdaienale klktpsnpak pgsswipfke imlslqqraq krasyilrle eispwlaamt
     2101 steialpgev sardtvtihs vggtitilpt ktkpkkllfl gsdgksypyl fkgledlhld
     2161 erimqflsiv ntmfatinrq etprfharhy svtplgtrsg liqwvdgatp lfglykrwqq
     2221 reaalqaqka qdsyqtpqnp givprpsely yskigpalka vglsldvsrr dwplhvmkav
     2281 leelmeatpp nllakelwss cttpdewwrv tqsyarstav msmvgyiigl gdrhldnvli
     2341 dmttgevvhi dynvcfekgk slrvpekvpf rmtqnietal gvtgvegvfr lsceqvlhim
     2401 rrgretlltl leafvydplv dwtaggeagf agavyggggq qaeskqskre mereitrslf
     2461 ssrvaeikvn wfknrdemlv vlpkldssld eylslqeqlt dveklqgkll eeieflegae
     2521 gvdhpshtlq hrysehtqlq tqqravqeai qvklnefeqw ithyqaafsn leatqlasll
     2581 qeistqmdlg ppsyvpataf lqnagqahli sqceqlegev gallqqrrsv lrgcleqlhh
     2641 yatvalqypk aifqkhrieq wktwmeelic nttvercqel yrkyemqyap qppptvcqfi
     2701 tatemtlqry aadinsrlir qverlkqeav tvpvcedqlk eiercikvfl hengeegsls
     2761 lasviisalc tltrrnlmme gaassageql vdltsrdgaw fleelcsmsg nvtclvqllk
     2821 qchlvpqdld ipnpmeasea vhlangvyts lqelnsnfrq iifpealrcl mkgeytlesm
     2881 lheldslieq ttdgvplqtl veslqaylrn aamgleeeth ahyidvarml haqygeliqp
     2941 rngsvdetpk msagqmllva fdgmfaqvet afgllvekln kmeipiawrk idiirearst
     3001 qvnffdddnh rqvleeiffl krlqtikeff rlcgtfsktl sgsssledqn tvngpvqivn
     3061 vktlfrnscf sedqmakpik aftadfvrql liglpnqalg ltlcsfisal gvdiiaqvea
     3121 kdfgaeskvs vddlckkave hniqigkfsq lvmnratvla ssydtawkkh dlvrrletsi
     3181 sscktslqrv qlhiamfqwq hedllinrpq amsvtppprs ailtsmkkkl htlsqietsi
     3241 atvqeklaal easieqrlkw agganpalap vlqdfeatia errnlvlkes qrasqvtflc
     3301 sniihfeslr trtaealnld aalfelikrc qqmcsfasqf nssvselelr llqrvdttle
     3361 hpigssewll sahkqltqdm stqraiqtek eqqietvcet iqnlvdnikt vltghnrqlg
     3421 dvkhllkama kdeeaaladg edvpyensvr qflgeykswq dniqtvlftl vqamgqvrsq
     3481 ehvemlqeit ptlkelktqs qsvynnlvsf asplvtdatn ecssptssat yqpsfaaavr
     3541 sntgqktqpd vmsqnarkli qknlatsadt ppsaipgtgk svacspkkav rdpktgkavq
     3601 ernsyavsvw krvkaklegr dvdpsrrmsv aeqvdyvike atnldnlaql yegwtawv
//
LOCUS       XP_061008905            3646 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase SMG1 isoform X2 [Dama dama].
ACCESSION   XP_061008905
VERSION     XP_061008905.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152922.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3646
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3646
                     /product="serine/threonine-protein kinase SMG1 isoform X2"
                     /calculated_mol_wt=408721
     Region          18..126
                     /region_name="SMG1_N"
                     /note="Serine/threonine-protein kinase SMG1 N-terminal;
                     pfam17229"
                     /db_xref="CDD:435799"
     Region          617..1227
                     /region_name="SMG1"
                     /note="Serine/threonine-protein kinase smg-1; pfam15785"
                     /db_xref="CDD:464869"
     Region          2106..2411
                     /region_name="PIKKc_SMG1"
                     /note="Catalytic domain of Suppressor of Morphogenetic
                     effect on Genitalia-1; cd05170"
                     /db_xref="CDD:270714"
     Site            order(2116,2118..2120,2122,2138,2140,2143,2178,2190..2193,
                     2198,2325,2327,2338..2339)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270714"
     Site            2317..2325
                     /site_type="active"
                     /note="catalytic loop [active]"
                     /db_xref="CDD:270714"
     Site            2339..2361
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270714"
     Region          3616..3645
                     /region_name="FATC"
                     /note="FATC domain; pfam02260"
                     /db_xref="CDD:460514"
     CDS             1..3646
                     /gene="SMG1"
                     /coded_by="XM_061152922.1:378..11318"
                     /db_xref="GeneID:133063489"
ORIGIN      
        1 mqkhhkgsil ysmrflrtds asadpdnlky sssrdrggss syglqpsnsa vvsrqrhddt
       61 rihadiqnde kggysvnggs gentygrksl gqelrvnnvt speftsiqhg sralaikdmr
      121 ksqersmsys desrlsnllr ritreddrdr rlatvkqlke fiqqpenklv lvkqldnila
      181 avhdvlness kllqelrqeg acclgllcas lsyeaekifk wifskfsssa kdevkllylc
      241 atykaletvg ekkafssvmq lvmtslqsil envdtpellc kcvkcillva rcyphifstn
      301 frdtvdilvg whidhtqkps ltqqvsgwlq slepfwvadl afsttllgqf ledmeayaed
      361 lshvasgesv dedvpppsvs lpklaallrv fstvvrsige rfspirgppi teayvtdvly
      421 rvmrcvtaan qvffseavlt aanecvgvll gsldpsmtih cdmvitygld qlencqtcgt
      481 dyiisvlnll tliveqintk lpssfveklf ipsskllflr yhkekevvav ahavyqavls
      541 lknipvleta yklilgemtc alnnllhslq lpdacseikh eafknhvfnv dnakfvvifd
      601 lsalttigna knsligmwal sptvfallsk nlmvvhgela vhfpaiqyav lytlyshctr
      661 hdhfisssls ssspslfdga vistvttatk khfsiilnll gillkkdnln qdtrnllmtw
      721 alevavlmkk setyaplfsl psfhkfckgl lantlvedvn iclqacsslh alssslpddl
      781 lqrcvdvcrv qlvhsgtrir qafgkllksi pldvvlsnnn hteiqeisla lrshmskaps
      841 ntfhpqdfsd visfilygns hrtgkdnwle rlfyscqrld krdqstiprn llktdavlwq
      901 waiweaaqft vlsklrtplg raqdtfqtie giirslaaht lnpdqdvsqw ttadndeghs
      961 snqlrlvlll qylenleklm ynayegcana ltsppkvirt ffytnrqtcq dwltrirlsi
     1021 mrvgllagqp avtvrhgfdl ltemktnpsq gnelevtimm vvealcelhc peaiqgiavw
     1081 sssvvgknll winsvaqqae grfekasvey qehlcamtgv dccisgfdks vltlantgrn
     1141 saspkhslng esrktllskp tdsspeviny lgnkacecyi siadwaavqe wqnaihdlkk
     1201 stsstslnlk adfnyiksls sfesgefvec teqlellpge nisllaggsk ekidmkkllp
     1261 nmlspdprel qksievqllr ssvclataln hieqdqkwqs itenvvkylk qtsriavgpl
     1321 rlstltvsqs lpvlstlqly cssalentvs nrlstedcli plfsealrsc kqhdvrpwmq
     1381 alrytmyqsq llekikeqtv pvrshlmelg ltaakfarkr gnvslatrll aqcsevqlgk
     1441 tttaqdlvqh fkklstqgqv dekwgpeldi ektkllytag qsthamemls scaisfcksa
     1501 kaehavaksi ltlakwvqae wkeisgqlkq vyraqqqqns tglstlskni ltlielpsvn
     1561 ameeeyprie sestvhigvg epdfilgqly hlssvqapev akswaalasw ayrwgrkvvd
     1621 nasqgegvrl lpreksevqn llpdtiteee keriygilgq avcrpagiqd editlqites
     1681 edneeddmvd viwrqlissc pwlseldesa tegvikvwrk vvdrifslyk lscsayftfl
     1741 klnagqipld eddprlhlsh rveqstddmi vmatlrllrl lvkhagelrq ylehglettp
     1801 tapwrgiipq lfsrlnhpev yvrqsicnll crvaqdsphl ilypaivgti slssesqasg
     1861 nkfssaiptl lgniqgeell vseceggspp asqdsnkdep ksglnedqam mqdcyskivd
     1921 klssanptmv lqvqmlvael rrvtvlwdel wlgvllqqhm yvlrriqqle devkrvqnnn
     1981 tlrkeekiai mrekhtalmk pivfalehvr sitaapaetp hekwfqdnyg daienalekl
     2041 ktpsnpakpg sswipfkeim lslqqraqkr asyilrleei spwlaamtst eialpgevsa
     2101 rdtvtihsvg gtitilptkt kpkkllflgs dgksypylfk gledlhlder imqflsivnt
     2161 mfatinrqet prfharhysv tplgtrsgli qwvdgatplf glykrwqqre aalqaqkaqd
     2221 syqtpqnpgi vprpselyys kigpalkavg lsldvsrrdw plhvmkavle elmeatppnl
     2281 lakelwssct tpdewwrvtq syarstavms mvgyiiglgd rhldnvlidm ttgevvhidy
     2341 nvcfekgksl rvpekvpfrm tqnietalgv tgvegvfrls ceqvlhimrr gretlltlle
     2401 afvydplvdw taggeagfag avyggggqqa eskqskreme reitrslfss rvaeikvnwf
     2461 knrdemlvvl pkldssldey lslqeqltdv eklqgkllee ieflegaegv dhpshtlqhr
     2521 ysehtqlqtq qravqeaiqv klnefeqwit hyqaafsnle atqlasllqe istqmdlgpp
     2581 syvpataflq nagqahlisq ceqlegevga llqqrrsvlr gcleqlhhya tvalqypkai
     2641 fqkhrieqwk twmeelicnt tvercqelyr kyemqyapqp pptvcqfita temtlqryaa
     2701 dinsrlirqv erlkqeavtv pvcedqlkei ercikvflhe ngeegslsla sviisalctl
     2761 trrnlmmega assageqlvd ltsrdgawfl eelcsmsgnv tclvqllkqc hlvpqdldip
     2821 npmeaseavh langvytslq elnsnfrqii fpealrclmk geytlesmlh eldslieqtt
     2881 dgvplqtlve slqaylrnaa mgleeethah yidvarmlha qygeliqprn gsvdetpkms
     2941 agqmllvafd gmfaqvetaf gllveklnkm eipiawrkid iirearstqv nffdddnhrq
     3001 vleeifflkr lqtikeffrl cgtfsktlsg sssledqntv ngpvqivnvk tlfrnscfse
     3061 dqmakpikaf tadfvrqlli glpnqalglt lcsfisalgv diiaqveakd fgaeskvsvd
     3121 dlckkavehn iqigkfsqlv mnratvlass ydtawkkhdl vrrletsiss cktslqrvql
     3181 hiamfqwqhe dllinrpqam svtppprsai ltsmkkklht lsqietsiat vqeklaalea
     3241 sieqrlkwag ganpalapvl qdfeatiaer rnlvlkesqr asqvtflcsn iihfeslrtr
     3301 taealnldaa lfelikrcqq mcsfasqfns svselelrll qrvdttlehp igssewllsa
     3361 hkqltqdmst qraiqtekeq qietvcetiq nlvdniktvl tghnrqlgdv khllkamakd
     3421 eeaaladged vpyensvrqf lgeykswqdn iqtvlftlvq amgqvrsqeh vemlqeitpt
     3481 lkelktqsqs vynnlvsfas plvtdatnec ssptssatyq psfaaavrsn tgqktqpdvm
     3541 sqnarkliqk nlatsadtpp saipgtgksv acspkkavrd pktgkavqer nsyavsvwkr
     3601 vkaklegrdv dpsrrmsvae qvdyvikeat nldnlaqlye gwtawv
//
LOCUS       XP_061008906            3606 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase SMG1 isoform X3 [Dama dama].
ACCESSION   XP_061008906
VERSION     XP_061008906.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152923.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3606
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3606
                     /product="serine/threonine-protein kinase SMG1 isoform X3"
                     /calculated_mol_wt=404271
     Region          30..>83
                     /region_name="SMG1_N"
                     /note="Serine/threonine-protein kinase SMG1 N-terminal;
                     pfam17229"
                     /db_xref="CDD:435799"
     Region          577..1187
                     /region_name="SMG1"
                     /note="Serine/threonine-protein kinase smg-1; pfam15785"
                     /db_xref="CDD:464869"
     Region          2066..2371
                     /region_name="PIKKc_SMG1"
                     /note="Catalytic domain of Suppressor of Morphogenetic
                     effect on Genitalia-1; cd05170"
                     /db_xref="CDD:270714"
     Site            order(2076,2078..2080,2082,2098,2100,2103,2138,2150..2153,
                     2158,2285,2287,2298..2299)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270714"
     Site            2277..2285
                     /site_type="active"
                     /note="catalytic loop [active]"
                     /db_xref="CDD:270714"
     Site            2299..2321
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270714"
     Region          3576..3605
                     /region_name="FATC"
                     /note="FATC domain; pfam02260"
                     /db_xref="CDD:460514"
     CDS             1..3606
                     /gene="SMG1"
                     /coded_by="XM_061152923.1:283..11103"
                     /db_xref="GeneID:133063489"
ORIGIN      
        1 msrrapgsrl ssggggtkyp rswndwqprt dsasadpdnl kysssrdrgg sssyglqpsn
       61 savvsrqrhd dtrihadiqn dekersmsys desrlsnllr ritreddrdr rlatvkqlke
      121 fiqqpenklv lvkqldnila avhdvlness kllqelrqeg acclgllcas lsyeaekifk
      181 wifskfsssa kdevkllylc atykaletvg ekkafssvmq lvmtslqsil envdtpellc
      241 kcvkcillva rcyphifstn frdtvdilvg whidhtqkps ltqqvsgwlq slepfwvadl
      301 afsttllgqf ledmeayaed lshvasgesv dedvpppsvs lpklaallrv fstvvrsige
      361 rfspirgppi teayvtdvly rvmrcvtaan qvffseavlt aanecvgvll gsldpsmtih
      421 cdmvitygld qlencqtcgt dyiisvlnll tliveqintk lpssfveklf ipsskllflr
      481 yhkekevvav ahavyqavls lknipvleta yklilgemtc alnnllhslq lpdacseikh
      541 eafknhvfnv dnakfvvifd lsalttigna knsligmwal sptvfallsk nlmvvhgela
      601 vhfpaiqyav lytlyshctr hdhfisssls ssspslfdga vistvttatk khfsiilnll
      661 gillkkdnln qdtrnllmtw alevavlmkk setyaplfsl psfhkfckgl lantlvedvn
      721 iclqacsslh alssslpddl lqrcvdvcrv qlvhsgtrir qafgkllksi pldvvlsnnn
      781 hteiqeisla lrshmskaps ntfhpqdfsd visfilygns hrtgkdnwle rlfyscqrld
      841 krdqstiprn llktdavlwq waiweaaqft vlsklrtplg raqdtfqtie giirslaaht
      901 lnpdqdvsqw ttadndeghs snqlrlvlll qylenleklm ynayegcana ltsppkvirt
      961 ffytnrqtcq dwltrirlsi mrvgllagqp avtvrhgfdl ltemktnpsq gnelevtimm
     1021 vvealcelhc peaiqgiavw sssvvgknll winsvaqqae grfekasvey qehlcamtgv
     1081 dccisgfdks vltlantgrn saspkhslng esrktllskp tdsspeviny lgnkacecyi
     1141 siadwaavqe wqnaihdlkk stsstslnlk adfnyiksls sfesgefvec teqlellpge
     1201 nisllaggsk ekidmkkllp nmlspdprel qksievqllr ssvclataln hieqdqkwqs
     1261 itenvvkylk qtsriavgpl rlstltvsqs lpvlstlqly cssalentvs nrlstedcli
     1321 plfsealrsc kqhdvrpwmq alrytmyqsq llekikeqtv pvrshlmelg ltaakfarkr
     1381 gnvslatrll aqcsevqlgk tttaqdlvqh fkklstqgqv dekwgpeldi ektkllytag
     1441 qsthamemls scaisfcksa kaehavaksi ltlakwvqae wkeisgqlkq vyraqqqqns
     1501 tglstlskni ltlielpsvn ameeeyprie sestvhigvg epdfilgqly hlssvqapev
     1561 akswaalasw ayrwgrkvvd nasqgegvrl lpreksevqn llpdtiteee keriygilgq
     1621 avcrpagiqd editlqites edneeddmvd viwrqlissc pwlseldesa tegvikvwrk
     1681 vvdrifslyk lscsayftfl klnagqipld eddprlhlsh rveqstddmi vmatlrllrl
     1741 lvkhagelrq ylehglettp tapwrgiipq lfsrlnhpev yvrqsicnll crvaqdsphl
     1801 ilypaivgti slssesqasg nkfssaiptl lgniqgeell vseceggspp asqdsnkdep
     1861 ksglnedqam mqdcyskivd klssanptmv lqvqmlvael rrvtvlwdel wlgvllqqhm
     1921 yvlrriqqle devkrvqnnn tlrkeekiai mrekhtalmk pivfalehvr sitaapaetp
     1981 hekwfqdnyg daienalekl ktpsnpakpg sswipfkeim lslqqraqkr asyilrleei
     2041 spwlaamtst eialpgevsa rdtvtihsvg gtitilptkt kpkkllflgs dgksypylfk
     2101 gledlhlder imqflsivnt mfatinrqet prfharhysv tplgtrsgli qwvdgatplf
     2161 glykrwqqre aalqaqkaqd syqtpqnpgi vprpselyys kigpalkavg lsldvsrrdw
     2221 plhvmkavle elmeatppnl lakelwssct tpdewwrvtq syarstavms mvgyiiglgd
     2281 rhldnvlidm ttgevvhidy nvcfekgksl rvpekvpfrm tqnietalgv tgvegvfrls
     2341 ceqvlhimrr gretlltlle afvydplvdw taggeagfag avyggggqqa eskqskreme
     2401 reitrslfss rvaeikvnwf knrdemlvvl pkldssldey lslqeqltdv eklqgkllee
     2461 ieflegaegv dhpshtlqhr ysehtqlqtq qravqeaiqv klnefeqwit hyqaafsnle
     2521 atqlasllqe istqmdlgpp syvpataflq nagqahlisq ceqlegevga llqqrrsvlr
     2581 gcleqlhhya tvalqypkai fqkhrieqwk twmeelicnt tvercqelyr kyemqyapqp
     2641 pptvcqfita temtlqryaa dinsrlirqv erlkqeavtv pvcedqlkei ercikvflhe
     2701 ngeegslsla sviisalctl trrnlmmega assageqlvd ltsrdgawfl eelcsmsgnv
     2761 tclvqllkqc hlvpqdldip npmeaseavh langvytslq elnsnfrqii fpealrclmk
     2821 geytlesmlh eldslieqtt dgvplqtlve slqaylrnaa mgleeethah yidvarmlha
     2881 qygeliqprn gsvdetpkms agqmllvafd gmfaqvetaf gllveklnkm eipiawrkid
     2941 iirearstqv nffdddnhrq vleeifflkr lqtikeffrl cgtfsktlsg sssledqntv
     3001 ngpvqivnvk tlfrnscfse dqmakpikaf tadfvrqlli glpnqalglt lcsfisalgv
     3061 diiaqveakd fgaeskvsvd dlckkavehn iqigkfsqlv mnratvlass ydtawkkhdl
     3121 vrrletsiss cktslqrvql hiamfqwqhe dllinrpqam svtppprsai ltsmkkklht
     3181 lsqietsiat vqeklaalea sieqrlkwag ganpalapvl qdfeatiaer rnlvlkesqr
     3241 asqvtflcsn iihfeslrtr taealnldaa lfelikrcqq mcsfasqfns svselelrll
     3301 qrvdttlehp igssewllsa hkqltqdmst qraiqtekeq qietvcetiq nlvdniktvl
     3361 tghnrqlgdv khllkamakd eeaaladged vpyensvrqf lgeykswqdn iqtvlftlvq
     3421 amgqvrsqeh vemlqeitpt lkelktqsqs vynnlvsfas plvtdatnec ssptssatyq
     3481 psfaaavrsn tgqktqpdvm sqnarkliqk nlatsadtpp saipgtgksv acspkkavrd
     3541 pktgkavqer nsyavsvwkr vkaklegrdv dpsrrmsvae qvdyvikeat nldnlaqlye
     3601 gwtawv
//
LOCUS       XP_061008907             261 aa            linear   MAM 02-DEC-2023
DEFINITION  acidic leucine-rich nuclear phosphoprotein 32 family member B-like
            [Dama dama].
ACCESSION   XP_061008907
VERSION     XP_061008907.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152924.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..261
                     /product="acidic leucine-rich nuclear phosphoprotein 32
                     family member B-like"
                     /calculated_mol_wt=29785
     Region          <71..146
                     /region_name="LRR_9"
                     /note="Leucine-rich repeat; pfam14580"
                     /db_xref="CDD:405295"
     Region          90..114
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          115..141
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..261
                     /gene="LOC133063490"
                     /coded_by="XM_061152924.1:64..849"
                     /db_xref="GeneID:133063490"
ORIGIN      
        1 mdmkrrihle lrnrtpaavr elvldncksn dgetegltae fvnleflsli nvglisvsdl
       61 pklpklkkle lsdnricggl dmlaeklpnl thlnlsgnkl kdistleplk kleclkrldl
      121 fncevtnlnd yresvfkllp qltyldgydr edreapdsda evdgvdeeed deegededke
      181 ededgeeeef ddeedddede daegeedede vsgeeeefgq dgevdedded ededededee
      241 eeesgkgekr kretddeged h
//
LOCUS       XP_061008908             532 aa            linear   MAM 02-DEC-2023
DEFINITION  inositol 1,4,5-trisphosphate receptor-interacting protein-like 2
            [Dama dama].
ACCESSION   XP_061008908
VERSION     XP_061008908.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152925.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..532
                     /product="inositol 1,4,5-trisphosphate
                     receptor-interacting protein-like 2"
                     /calculated_mol_wt=58028
     Region          371..>450
                     /region_name="Mab-21_C"
                     /note="Mab-21 protein HhH/H2TH-like domain; pfam20266"
                     /db_xref="CDD:466416"
     CDS             1..532
                     /gene="ITPRIPL2"
                     /coded_by="XM_061152925.1:206..1804"
                     /db_xref="GeneID:133063491"
ORIGIN      
        1 msvhytlnlr vfwplvtglc talvclyhvl rgnggartep pdgadggfpl lkvavllllg
       61 yillrcrhav rqrflpgppr lgghsafssk hfpepsldil lesyyehevr lsphvlghsk
      121 ahvsrivgel vragrargsp gpipggalal afrgdfiqvg sayeqhkirr pdgfdvlvpl
      181 rlpplvslep rslgaepela pafhgcfvca lkappgasgg hwlrdckpfs dgfcvdvrgr
      241 rllsatlvlr wfqahlqrsl atvryslegr crvsltpggl eqpptlhilp crtdygccrl
      301 smavrlipav hlgdsvflva pppppspagp lselpgglrg dalwgvntar qeqkllswlq
      361 erappgacyl kclqllkalr dlgargldpt aaaqwgrlls syvlksalla vlqregapap
      421 gwdeahlger leelvlflrd cllrrrtlfh cvlgpggaat evgplpkvlr eaapvdllaa
      481 fdrqfrelaa arllstwrrl pqllrayggp rylvrcpppr sqrtqgfped ep
//
LOCUS       XP_061008910             217 aa            linear   MAM 02-DEC-2023
DEFINITION  5-demethoxyubiquinone hydroxylase, mitochondrial [Dama dama].
ACCESSION   XP_061008910
VERSION     XP_061008910.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152927.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..217
                     /product="5-demethoxyubiquinone hydroxylase,
                     mitochondrial"
                     /calculated_mol_wt=24387
     Region          47..214
                     /region_name="COQ7"
                     /note="Ubiquinone biosynthesis protein COQ7; pfam03232"
                     /db_xref="CDD:460854"
     CDS             1..217
                     /gene="COQ7"
                     /coded_by="XM_061152927.1:88..741"
                     /db_xref="GeneID:133063492"
ORIGIN      
        1 mscvraaaac clwrlrtsal qplsaygrri svrfcssrmt ldninreavd riirvdhage
       61 yganriyagq mailgrtsvg pviqkmwdqe kdhlkkfnel mvafrvrpti lmpfwnvvgf
      121 algagtallg kegamactva veesiahhyn nqirtlmeke pekyeellqv irkfrdeele
      181 hhdiglehda elapayavlk sviqagcrva iylserl
//
LOCUS       XP_061008911             726 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane channel-like protein 7 isoform X1 [Dama dama].
ACCESSION   XP_061008911
VERSION     XP_061008911.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152928.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..726
                     /product="transmembrane channel-like protein 7 isoform X1"
                     /calculated_mol_wt=84196
     Region          486..597
                     /region_name="TMC"
                     /note="TMC domain; pfam07810"
                     /db_xref="CDD:462275"
     CDS             1..726
                     /gene="TMC7"
                     /coded_by="XM_061152928.1:83..2263"
                     /db_xref="GeneID:133063493"
ORIGIN      
        1 msessistlp pgrpsrqpfi hqeslsldss cfssppvnfl qelpsyrsia rkrttilsrd
       61 kqngtllkpt dsynfqlege itedldnqsi rkyalnisek rrlrdiqetq mkylsewdqw
      121 krysskswkr fiekaremtt hlelwredir siegkfgtgi qsyfsflrfl vllnlvifli
      181 ifmvvllpvl ltrykitnss filipskdvd iqctvypiss sgliyfysyv idllsgtgfl
      241 edtylfyghy tidgvkfqnf iydlplayll stiaylalsl vwivkrsveg fkinlirsee
      301 hfqsycnkif agwdfcitnr smadlkhssl ryelradlee erirqkiaer tseetiriys
      361 lrlflncivl avlaacfyai ykatifsqeh mkkeidkmvf genllilylp sivitlanfi
      421 tpiifakiih yedyspgfei rltilrcvfm rlaticvlvf tlgskitscd nylcelcgyn
      481 qklypcwetq vgqemyklmi fdliiilavt lfvdfprkil vtycsswklf qcwgeqefai
      541 pdnvlgivyg qticwigaff spllpaiatl kfiiifyvke isllytcrps prqfrasnsn
      601 fffllvllig lclaiiplti smaripsska cgpftnfntt wevvpktvst fpnslqtlvy
      661 gitseafavp ffmiiclimf yfialagahk rvvvqlreql nlesrdkryl iqklteaqrd
      721 lrnrld
//
LOCUS       XP_061008912             695 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane channel-like protein 7 isoform X2 [Dama dama].
ACCESSION   XP_061008912
VERSION     XP_061008912.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152929.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..695
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..695
                     /product="transmembrane channel-like protein 7 isoform X2"
                     /calculated_mol_wt=80017
     Region          486..597
                     /region_name="TMC"
                     /note="TMC domain; pfam07810"
                     /db_xref="CDD:462275"
     CDS             1..695
                     /gene="TMC7"
                     /coded_by="XM_061152929.1:83..2170"
                     /db_xref="GeneID:133063493"
ORIGIN      
        1 msessistlp pgrpsrqpfi hqeslsldss cfssppvnfl qelpsyrsia rkrttilsrd
       61 kqngtllkpt dsynfqlege itedldnqsi rkyalnisek rrlrdiqetq mkylsewdqw
      121 krysskswkr fiekaremtt hlelwredir siegkfgtgi qsyfsflrfl vllnlvifli
      181 ifmvvllpvl ltrykitnss filipskdvd iqctvypiss sgliyfysyv idllsgtgfl
      241 edtylfyghy tidgvkfqnf iydlplayll stiaylalsl vwivkrsveg fkinlirsee
      301 hfqsycnkif agwdfcitnr smadlkhssl ryelradlee erirqkiaer tseetiriys
      361 lrlflncivl avlaacfyai ykatifsqeh mkkeidkmvf genllilylp sivitlanfi
      421 tpiifakiih yedyspgfei rltilrcvfm rlaticvlvf tlgskitscd nylcelcgyn
      481 qklypcwetq vgqemyklmi fdliiilavt lfvdfprkil vtycsswklf qcwgeqefai
      541 pdnvlgivyg qticwigaff spllpaiatl kfiiifyvke isllytcrps prqfrasnsn
      601 fffllvllig lclaiiplti smaripsska cgpftnfntt wevvpktvst fpnslqtlvy
      661 gitseafavp ffmiicrsaq aggrpapraa epgks
//
LOCUS       XP_061008913             661 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane channel-like protein 7 isoform X3 [Dama dama].
ACCESSION   XP_061008913
VERSION     XP_061008913.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152930.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..661
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..661
                     /product="transmembrane channel-like protein 7 isoform X3"
                     /calculated_mol_wt=76421
     Region          486..579
                     /region_name="TMC"
                     /note="TMC domain; pfam07810"
                     /db_xref="CDD:462275"
     CDS             1..661
                     /gene="TMC7"
                     /coded_by="XM_061152930.1:83..2068"
                     /db_xref="GeneID:133063493"
ORIGIN      
        1 msessistlp pgrpsrqpfi hqeslsldss cfssppvnfl qelpsyrsia rkrttilsrd
       61 kqngtllkpt dsynfqlege itedldnqsi rkyalnisek rrlrdiqetq mkylsewdqw
      121 krysskswkr fiekaremtt hlelwredir siegkfgtgi qsyfsflrfl vllnlvifli
      181 ifmvvllpvl ltrykitnss filipskdvd iqctvypiss sgliyfysyv idllsgtgfl
      241 edtylfyghy tidgvkfqnf iydlplayll stiaylalsl vwivkrsveg fkinlirsee
      301 hfqsycnkif agwdfcitnr smadlkhssl ryelradlee erirqkiaer tseetiriys
      361 lrlflncivl avlaacfyai ykatifsqeh mkkeidkmvf genllilylp sivitlanfi
      421 tpiifakiih yedyspgfei rltilrcvfm rlaticvlvf tlgskitscd nylcelcgyn
      481 qklypcwetq vgqemyklmi fdliiilavt lfvdfprkil vtycsswklf qcwgeqefai
      541 pdnvlgivyg qticwigaff spllpaiatl kfiiifyvke hpflqslwav hqlqhhlggg
      601 pqdsehlpql aadtglwhhf gslrgaffhd hlpdyvllhr psrsaqaggr papraaepgk
      661 s
//
LOCUS       XP_061008914             646 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane channel-like protein 7 isoform X4 [Dama dama].
ACCESSION   XP_061008914
VERSION     XP_061008914.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152931.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..646
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..646
                     /product="transmembrane channel-like protein 7 isoform X4"
                     /calculated_mol_wt=74862
     Region          486..579
                     /region_name="TMC"
                     /note="TMC domain; pfam07810"
                     /db_xref="CDD:462275"
     CDS             1..646
                     /gene="TMC7"
                     /coded_by="XM_061152931.1:83..2023"
                     /db_xref="GeneID:133063493"
ORIGIN      
        1 msessistlp pgrpsrqpfi hqeslsldss cfssppvnfl qelpsyrsia rkrttilsrd
       61 kqngtllkpt dsynfqlege itedldnqsi rkyalnisek rrlrdiqetq mkylsewdqw
      121 krysskswkr fiekaremtt hlelwredir siegkfgtgi qsyfsflrfl vllnlvifli
      181 ifmvvllpvl ltrykitnss filipskdvd iqctvypiss sgliyfysyv idllsgtgfl
      241 edtylfyghy tidgvkfqnf iydlplayll stiaylalsl vwivkrsveg fkinlirsee
      301 hfqsycnkif agwdfcitnr smadlkhssl ryelradlee erirqkiaer tseetiriys
      361 lrlflncivl avlaacfyai ykatifsqeh mkkeidkmvf genllilylp sivitlanfi
      421 tpiifakiih yedyspgfei rltilrcvfm rlaticvlvf tlgskitscd nylcelcgyn
      481 qklypcwetq vgqemyklmi fdliiilavt lfvdfprkil vtycsswklf qcwgeqefai
      541 pdnvlgivyg qticwigaff spllpaiatl kfiiifyvke hpflqslwav hqlqhhlggg
      601 pqdsehlpql aadtglwhhf gslrgaffhd hlpertsgws sssess
//
LOCUS       XP_061008915             616 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane channel-like protein 7 isoform X5 [Dama dama].
ACCESSION   XP_061008915
VERSION     XP_061008915.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152932.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..616
                     /product="transmembrane channel-like protein 7 isoform X5"
                     /calculated_mol_wt=71584
     Region          376..487
                     /region_name="TMC"
                     /note="TMC domain; pfam07810"
                     /db_xref="CDD:462275"
     CDS             1..616
                     /gene="TMC7"
                     /coded_by="XM_061152932.1:405..2255"
                     /db_xref="GeneID:133063493"
ORIGIN      
        1 mkylsewdqw krysskswkr fiekaremtt hlelwredir siegkfgtgi qsyfsflrfl
       61 vllnlvifli ifmvvllpvl ltrykitnss filipskdvd iqctvypiss sgliyfysyv
      121 idllsgtgfl edtylfyghy tidgvkfqnf iydlplayll stiaylalsl vwivkrsveg
      181 fkinlirsee hfqsycnkif agwdfcitnr smadlkhssl ryelradlee erirqkiaer
      241 tseetiriys lrlflncivl avlaacfyai ykatifsqeh mkkeidkmvf genllilylp
      301 sivitlanfi tpiifakiih yedyspgfei rltilrcvfm rlaticvlvf tlgskitscd
      361 nylcelcgyn qklypcwetq vgqemyklmi fdliiilavt lfvdfprkil vtycsswklf
      421 qcwgeqefai pdnvlgivyg qticwigaff spllpaiatl kfiiifyvke isllytcrps
      481 prqfrasnsn fffllvllig lclaiiplti smaripsska cgpftnfntt wevvpktvst
      541 fpnslqtlvy gitseafavp ffmiiclimf yfialagahk rvvvqlreql nlesrdkryl
      601 iqklteaqrd lrnrld
//
LOCUS       XP_061008916             993 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane channel-like protein 5 isoform X1 [Dama dama].
ACCESSION   XP_061008916
VERSION     XP_061008916.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152933.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..993
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..993
                     /product="transmembrane channel-like protein 5 isoform X1"
                     /calculated_mol_wt=113705
     Region          711..817
                     /region_name="TMC"
                     /note="TMC domain; pfam07810"
                     /db_xref="CDD:462275"
     CDS             1..993
                     /gene="TMC5"
                     /coded_by="XM_061152933.1:381..3362"
                     /db_xref="GeneID:133063494"
ORIGIN      
        1 msayrnsaye edpdypdyse srnhtqgylk tpgslnnsdd lrtrsnpypa esrtssdyle
       61 slaepdypgs rsnpdypgtr shpysagtdy pkplaepeyi gsqrnpyqpg ssgepdysqs
      121 qrnpdfpgsk grgnytgsri npdyleslge pdypgaqenl nssgpratsn hpgsrrnpeh
      181 asprvkayid slgepdypga esqsnhphff gepdypgaed yrnstnfwge pdypgaengh
      241 dygssedpem arqmlsrtss vqplfhhegv sslgilgred vdypesiemk svgmanlypg
      301 apgngyvnpa yvgddglgps ygdpplsghd wlsspqgqkl ieslipmtfr drikairnqp
      361 rtmeekrnlr kmvdkekskq srrllelncc aqclnsisla yrrfknnlse lldsislwqk
      421 tlkviggkfg tsvlsyfnfl rwllkfnmfs fivtfsfiii pqltmtqenh lqftgleflt
      481 gagyftntvm yygfytnsti rhgnsrasyn mqlayiftig gclvvcffsl lfsmaryfrn
      541 nfinphiysr giaklifcwd ftvthesavk lrqknlstev renlseirqe nvkltfnqqf
      601 vrfsahvaaw vvssgvaitc cvavyylaen nlqflanhsn pgavlllpfv vscinlvmpr
      661 fysmfrlver yemprhevyt llirniflki siigilcyyw lkivalnsee cwetligqei
      721 yrlllmdfvf sladsflgef lrriigmrli tslglpefdi arnvleliya qtlvwigtff
      781 cpllpfiqmi tlfimfyvkn islmmnfqpp skawrasqmm tffifllffp sftgvlctla
      841 itiwrlkpsa dcgpfrglss fiesiyswid tlnksssyew vvwiyqnlig svhfffiltl
      901 ivliitylyw qitegrkimi rllheqiine gkdkmflidk liklqgmekr anptlftler
      961 rdlepwgplh vrqhdaaqdl rfrrsfqedn pka
//
LOCUS       XP_061008917             976 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane channel-like protein 5 isoform X2 [Dama dama].
ACCESSION   XP_061008917
VERSION     XP_061008917.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152934.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..976
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..976
                     /product="transmembrane channel-like protein 5 isoform X2"
                     /calculated_mol_wt=111593
     Region          694..800
                     /region_name="TMC"
                     /note="TMC domain; pfam07810"
                     /db_xref="CDD:462275"
     CDS             1..976
                     /gene="TMC5"
                     /coded_by="XM_061152934.1:282..3212"
                     /db_xref="GeneID:133063494"
ORIGIN      
        1 msayrnsaye edpdypdyse srnhtqgylk tpgslnnsdd lrtrsnpypa esrtssdyle
       61 slaepdypgs rsnpdypgtr shpysagtdy pkplaepeyi gsqrnpyqpg ssgepdysqs
      121 qrnpdfpgsk grgnytgsri npdyleslge pdypgaqenl nssgpratsn hpgsrrnpeh
      181 asprvkayid slgepdypga esqsnhphff gepdypgaed yrnstnfwge pdypgaengh
      241 dygssedpem arqmlsrtss vqplfhhegv sslgilgred vdypesiemk svgmanlypg
      301 apgngyvnpa yvgddglgps ygdpplsghd wlsspqgqkl ieslipmtfr drikairnqp
      361 rtmeekrnlr kmvdkekskq srrllelncc aqclnsisla yrrfknnlse lldsislwqk
      421 tlkviggkfg tsvlsyfnfl rwllkfnmfs fivtfsfiii pqltmtqenh lqftgleflt
      481 gagyftntvm yygfytnsti rhgnsrasyn mqlayiftig gclvvcffsl lfrgiaklif
      541 cwdftvthes avklrqknls tevrenlsei rqenvkltfn qqfvrfsahv aawvvssgva
      601 itccvavyyl aennlqflan hsnpgavlll pfvvscinlv mprfysmfrl veryemprhe
      661 vytllirnif lkisiigilc yywlkivaln seecwetlig qeiyrlllmd fvfsladsfl
      721 geflrriigm rlitslglpe fdiarnvlel iyaqtlvwig tffcpllpfi qmitlfimfy
      781 vknislmmnf qppskawras qmmtffifll ffpsftgvlc tlaitiwrlk psadcgpfrg
      841 lssfiesiys widtlnksss yewvvwiyqn ligsvhfffi ltlivliity lywqitegrk
      901 imirllheqi inegkdkmfl idkliklqgm ekranptlft lerrdlepwg plhvrqhdaa
      961 qdlrfrrsfq ednpka
//
LOCUS       XP_061008919             331 aa            linear   MAM 02-DEC-2023
DEFINITION  glycerophosphodiester phosphodiesterase 1 isoform X1 [Dama dama].
ACCESSION   XP_061008919
VERSION     XP_061008919.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152936.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..331
                     /product="glycerophosphodiester phosphodiesterase 1
                     isoform X1"
                     /calculated_mol_wt=37352
     Region          68..323
                     /region_name="GDPD_GDE1"
                     /note="Glycerophosphodiester phosphodiesterase domain of
                     mammalian glycerophosphodiester phosphodiesterase GDE1 and
                     similar proteins; cd08573"
                     /db_xref="CDD:176515"
     Site            order(70,97,99,112,174,203,299)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176515"
     Site            order(70,112)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176515"
     Site            order(97,99,174)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:176515"
     CDS             1..331
                     /gene="GDE1"
                     /coded_by="XM_061152936.1:148..1143"
                     /db_xref="GeneID:133063496"
ORIGIN      
        1 mwlwedqggl mgpfsflllv lllltrspfn aclftgslyl llrlfsfepv psrramqvlk
       61 prdrvsaiah rggshdapen tlaairqaak ngaagveldl eftsdgipvi mhdntvdrtt
      121 dgtgrlcdlt feqirklnaa anhrlrndfp nekiptlrea vaeclnhnlt iffdvkghas
      181 katdalkkvy mefpklynns ivcsflpevi ykmrqtdqnv vtalihrpws lsrtgdgkpr
      241 fdtfwkqsmf valdilldws mhnilwylcg vsaflaqkdf ispdyvkkws akgiqvvgwt
      301 vntfdeksyy eshlgssyit dsmledcapg f
//
LOCUS       XP_061008920             221 aa            linear   MAM 02-DEC-2023
DEFINITION  glycerophosphodiester phosphodiesterase 1 isoform X2 [Dama dama].
ACCESSION   XP_061008920
VERSION     XP_061008920.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152937.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..221
                     /product="glycerophosphodiester phosphodiesterase 1
                     isoform X2"
                     /calculated_mol_wt=25288
     Region          1..213
                     /region_name="GDPD_GDE1"
                     /note="Glycerophosphodiester phosphodiesterase domain of
                     mammalian glycerophosphodiester phosphodiesterase GDE1 and
                     similar proteins; cd08573"
                     /db_xref="CDD:176515"
     CDS             1..221
                     /gene="GDE1"
                     /coded_by="XM_061152937.1:206..871"
                     /db_xref="GeneID:133063496"
ORIGIN      
        1 mhdntvdrtt dgtgrlcdlt feqirklnaa anhrlrndfp nekiptlrea vaeclnhnlt
       61 iffdvkghas katdalkkvy mefpklynns ivcsflpevi ykmrqtdqnv vtalihrpws
      121 lsrtgdgkpr fdtfwkqsmf valdilldws mhnilwylcg vsaflaqkdf ispdyvkkws
      181 akgiqvvgwt vntfdeksyy eshlgssyit dsmledcapg f
//
LOCUS       XP_061008921            1009 aa            linear   MAM 02-DEC-2023
DEFINITION  centriolar coiled-coil protein of 110 kDa isoform X1 [Dama dama].
ACCESSION   XP_061008921
VERSION     XP_061008921.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152938.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1009
                     /product="centriolar coiled-coil protein of 110 kDa
                     isoform X1"
                     /calculated_mol_wt=113244
     Region          29..106
                     /region_name="CaM_bind"
                     /note="Calcium-dependent calmodulin binding; pfam16025"
                     /db_xref="CDD:464981"
     Region          <607..691
                     /region_name="GBP_C"
                     /note="Guanylate-binding protein, C-terminal domain;
                     pfam02841"
                     /db_xref="CDD:460721"
     CDS             1..1009
                     /gene="CCP110"
                     /coded_by="XM_061152938.1:338..3367"
                     /db_xref="GeneID:133063497"
ORIGIN      
        1 meeyekfcek slsriqeasv stesflpvqs esislirfhg vavlspllni ekrkemqqek
       61 qkaldvearr qvnrkkallt rvqeilenvq vrkapnasdf hqwetetvys nsevrnlnvp
      121 aalpnilpsp tehstlakfe nitgvlplnn edqfngidla rdseefsylk qcdssnisqa
      181 eneaslktss aaaqetltsd vlfptnedqd pslleevtpd pyimslqnlm kkskeyiere
      241 qsrrslrsnv krsvneshsd kendavkvtd cgkeksqlig khcgsvipdk pslnksnvll
      301 qgaftqassm ntsvlgnfsk vdisirtghs tvletdsnfk giptfvtdnn viksltgsya
      361 kipspepsls pkmhrrrsrp ssachilinn pinaselspk gkeqavelvv qetdektnvp
      421 etvpklpvdl agvcsskvyv sknteaiqem vlgksnqvcq psgnqlenkv ihglaimegq
      481 lisdargphr mdstciager lhepyaarec vlsqnfdtvs gvkstnvlek nscnlqmeln
      541 ksydvknpsp llmqnqntrq qmdtptvscg keqfldnsfe kvkrrldldi dnlqkenypy
      601 vvttgiteqe rqhlpekrys kgsvyiknkm lessskegee ilkskmlafe emrkrleeqh
      661 aqqlslliae qereqerlqk dieeqekmlk ekkvitaeas eldisnavdl ewrkisdsgl
      721 ldtmlsqvds lhtsnsnssg ftssalqhsf gsanevpfyl wgsstsgltk lsvtrpfgra
      781 rtkwsqvfsp evqakfnkvt avakgfltrr lmqtdklkql qqtvkdtmef irsfqseapl
      841 krgvvsaqda slqervlaql raalygihdi ffvmdaaerm silhhdrevr kekmlrqmdk
      901 mrsprvalsa atqksldrkk ymkaaemgmp skkfmvkqnp setrvlqpnq gqnapvhrll
      961 srqgtpktsv kgvvqsrqks sqsrvphrap vsgvyagkiq rkrpnvati
//
LOCUS       XP_061008922            1009 aa            linear   MAM 02-DEC-2023
DEFINITION  centriolar coiled-coil protein of 110 kDa isoform X1 [Dama dama].
ACCESSION   XP_061008922
VERSION     XP_061008922.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152939.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1009
                     /product="centriolar coiled-coil protein of 110 kDa
                     isoform X1"
                     /calculated_mol_wt=113244
     Region          29..106
                     /region_name="CaM_bind"
                     /note="Calcium-dependent calmodulin binding; pfam16025"
                     /db_xref="CDD:464981"
     Region          <607..691
                     /region_name="GBP_C"
                     /note="Guanylate-binding protein, C-terminal domain;
                     pfam02841"
                     /db_xref="CDD:460721"
     CDS             1..1009
                     /gene="CCP110"
                     /coded_by="XM_061152939.1:301..3330"
                     /db_xref="GeneID:133063497"
ORIGIN      
        1 meeyekfcek slsriqeasv stesflpvqs esislirfhg vavlspllni ekrkemqqek
       61 qkaldvearr qvnrkkallt rvqeilenvq vrkapnasdf hqwetetvys nsevrnlnvp
      121 aalpnilpsp tehstlakfe nitgvlplnn edqfngidla rdseefsylk qcdssnisqa
      181 eneaslktss aaaqetltsd vlfptnedqd pslleevtpd pyimslqnlm kkskeyiere
      241 qsrrslrsnv krsvneshsd kendavkvtd cgkeksqlig khcgsvipdk pslnksnvll
      301 qgaftqassm ntsvlgnfsk vdisirtghs tvletdsnfk giptfvtdnn viksltgsya
      361 kipspepsls pkmhrrrsrp ssachilinn pinaselspk gkeqavelvv qetdektnvp
      421 etvpklpvdl agvcsskvyv sknteaiqem vlgksnqvcq psgnqlenkv ihglaimegq
      481 lisdargphr mdstciager lhepyaarec vlsqnfdtvs gvkstnvlek nscnlqmeln
      541 ksydvknpsp llmqnqntrq qmdtptvscg keqfldnsfe kvkrrldldi dnlqkenypy
      601 vvttgiteqe rqhlpekrys kgsvyiknkm lessskegee ilkskmlafe emrkrleeqh
      661 aqqlslliae qereqerlqk dieeqekmlk ekkvitaeas eldisnavdl ewrkisdsgl
      721 ldtmlsqvds lhtsnsnssg ftssalqhsf gsanevpfyl wgsstsgltk lsvtrpfgra
      781 rtkwsqvfsp evqakfnkvt avakgfltrr lmqtdklkql qqtvkdtmef irsfqseapl
      841 krgvvsaqda slqervlaql raalygihdi ffvmdaaerm silhhdrevr kekmlrqmdk
      901 mrsprvalsa atqksldrkk ymkaaemgmp skkfmvkqnp setrvlqpnq gqnapvhrll
      961 srqgtpktsv kgvvqsrqks sqsrvphrap vsgvyagkiq rkrpnvati
//
LOCUS       XP_061008923            1009 aa            linear   MAM 02-DEC-2023
DEFINITION  centriolar coiled-coil protein of 110 kDa isoform X1 [Dama dama].
ACCESSION   XP_061008923
VERSION     XP_061008923.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152940.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1009
                     /product="centriolar coiled-coil protein of 110 kDa
                     isoform X1"
                     /calculated_mol_wt=113244
     Region          29..106
                     /region_name="CaM_bind"
                     /note="Calcium-dependent calmodulin binding; pfam16025"
                     /db_xref="CDD:464981"
     Region          <607..691
                     /region_name="GBP_C"
                     /note="Guanylate-binding protein, C-terminal domain;
                     pfam02841"
                     /db_xref="CDD:460721"
     CDS             1..1009
                     /gene="CCP110"
                     /coded_by="XM_061152940.1:274..3303"
                     /db_xref="GeneID:133063497"
ORIGIN      
        1 meeyekfcek slsriqeasv stesflpvqs esislirfhg vavlspllni ekrkemqqek
       61 qkaldvearr qvnrkkallt rvqeilenvq vrkapnasdf hqwetetvys nsevrnlnvp
      121 aalpnilpsp tehstlakfe nitgvlplnn edqfngidla rdseefsylk qcdssnisqa
      181 eneaslktss aaaqetltsd vlfptnedqd pslleevtpd pyimslqnlm kkskeyiere
      241 qsrrslrsnv krsvneshsd kendavkvtd cgkeksqlig khcgsvipdk pslnksnvll
      301 qgaftqassm ntsvlgnfsk vdisirtghs tvletdsnfk giptfvtdnn viksltgsya
      361 kipspepsls pkmhrrrsrp ssachilinn pinaselspk gkeqavelvv qetdektnvp
      421 etvpklpvdl agvcsskvyv sknteaiqem vlgksnqvcq psgnqlenkv ihglaimegq
      481 lisdargphr mdstciager lhepyaarec vlsqnfdtvs gvkstnvlek nscnlqmeln
      541 ksydvknpsp llmqnqntrq qmdtptvscg keqfldnsfe kvkrrldldi dnlqkenypy
      601 vvttgiteqe rqhlpekrys kgsvyiknkm lessskegee ilkskmlafe emrkrleeqh
      661 aqqlslliae qereqerlqk dieeqekmlk ekkvitaeas eldisnavdl ewrkisdsgl
      721 ldtmlsqvds lhtsnsnssg ftssalqhsf gsanevpfyl wgsstsgltk lsvtrpfgra
      781 rtkwsqvfsp evqakfnkvt avakgfltrr lmqtdklkql qqtvkdtmef irsfqseapl
      841 krgvvsaqda slqervlaql raalygihdi ffvmdaaerm silhhdrevr kekmlrqmdk
      901 mrsprvalsa atqksldrkk ymkaaemgmp skkfmvkqnp setrvlqpnq gqnapvhrll
      961 srqgtpktsv kgvvqsrqks sqsrvphrap vsgvyagkiq rkrpnvati
//
LOCUS       XP_061008924             988 aa            linear   MAM 02-DEC-2023
DEFINITION  centriolar coiled-coil protein of 110 kDa isoform X2 [Dama dama].
ACCESSION   XP_061008924
VERSION     XP_061008924.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152941.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..988
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..988
                     /product="centriolar coiled-coil protein of 110 kDa
                     isoform X2"
                     /calculated_mol_wt=111085
     Region          29..106
                     /region_name="CaM_bind"
                     /note="Calcium-dependent calmodulin binding; pfam16025"
                     /db_xref="CDD:464981"
     Region          <607..691
                     /region_name="GBP_C"
                     /note="Guanylate-binding protein, C-terminal domain;
                     pfam02841"
                     /db_xref="CDD:460721"
     CDS             1..988
                     /gene="CCP110"
                     /coded_by="XM_061152941.1:337..3303"
                     /db_xref="GeneID:133063497"
ORIGIN      
        1 meeyekfcek slsriqeasv stesflpvqs esislirfhg vavlspllni ekrkemqqek
       61 qkaldvearr qvnrkkallt rvqeilenvq vrkapnasdf hqwetetvys nsevrnlnvp
      121 aalpnilpsp tehstlakfe nitgvlplnn edqfngidla rdseefsylk qcdssnisqa
      181 eneaslktss aaaqetltsd vlfptnedqd pslleevtpd pyimslqnlm kkskeyiere
      241 qsrrslrsnv krsvneshsd kendavkvtd cgkeksqlig khcgsvipdk pslnksnvll
      301 qgaftqassm ntsvlgnfsk vdisirtghs tvletdsnfk giptfvtdnn viksltgsya
      361 kipspepsls pkmhrrrsrp ssachilinn pinaselspk gkeqavelvv qetdektnvp
      421 etvpklpvdl agvcsskvyv sknteaiqem vlgksnqvcq psgnqlenkv ihglaimegq
      481 lisdargphr mdstciager lhepyaarec vlsqnfdtvs gvkstnvlek nscnlqmeln
      541 ksydvknpsp llmqnqntrq qmdtptvscg keqfldnsfe kvkrrldldi dnlqkenypy
      601 vvttgiteqe rqhlpekrys kgsvyiknkm lessskegee ilkskmlafe emrkrleeqh
      661 aqqlslliae qereqerlqk dieeqekmlk ekkvitaeas eldisnavdl ewrkisdsgl
      721 ldtmlsqvds lhtsnsnssg ftssalqhsf gsanevpfyl wgsstsgltk lsvtrpfgra
      781 rtkwsqvfsp evqakfnkvt avakgfltrr lmqtdklkql qqtvkdtmef irsfqseapl
      841 krgvvsaqda slqervlaql raalygihdi ffvmdaaerm silhhdrevr kekmlrqmdk
      901 mrsprvalsa atqksldrkk ymkaaemgmp skkfmvkqnp setrvlqpnq gqnapvhrll
      961 srqgsicrkn pkkaakccdn lrrqhslg
//
LOCUS       XP_061008925             978 aa            linear   MAM 02-DEC-2023
DEFINITION  VPS35 endosomal protein-sorting factor-like isoform X1 [Dama dama].
ACCESSION   XP_061008925
VERSION     XP_061008925.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152942.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..978
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..978
                     /product="VPS35 endosomal protein-sorting factor-like
                     isoform X1"
                     /calculated_mol_wt=111134
     CDS             1..978
                     /gene="VPS35L"
                     /coded_by="XM_061152942.1:30..2966"
                     /db_xref="GeneID:133063498"
ORIGIN      
        1 mkkwrqkdea vqcyslqgal rhsrnrnyka efascrleav plefgdyhpl kpitvteskt
       61 kkvsrkgsts stsssssssv vdplssvldg tdplsmfaas adpatlaaam dnsrkkrdrd
      121 dnsivgsdfe pwaskrgeil arytttekls inlfmgsekg kagtatsams ekvrtrleel
      181 ddfeegsqke llnltqqdyv nrieelnqsl kdawasdqkv kalkiviqcs kllsdtsviq
      241 fypskfvlit dildtfgklv yerifsmcvd nrsvlpdhfs penvndtake tclnwffkia
      301 sireliprfy veasilkcnk flsktgisec lprltcmvrg igdplasvya raylcrvgme
      361 vaphlkesln knffdflltf kqihgdtvqn qlvlqgvelp sylplyspam dwvfqcvsyr
      421 apealltemm erckklgnna lllnsvmsaf raefiatrsm dfigmikecd esgfpkhllf
      481 rslglnlala dppesdrlqi lneawkvitk lknpqdyinc aevwveytck hftkrevntv
      541 ladvikhmtp drafedsypq lqsiikkvia hfhdfsvlfs vekflpfldm fqkesvrvev
      601 ckcimevfik hqqeptkdpv ilnallhvck tmhdsvnalt ledekrmlay lingfikmvs
      661 fgrdfeqqls fyvetrsmfc nlepvlvqli hsvnrlamet rkvmkgnhsr ktaafvracv
      721 aycfitipsl vgiftrlnly lhsgqvalan qcfsqadaff kaaislvpev pkminidgkm
      781 rpsesfllef lcnffstlli vpdhpehgvl flvrellnvv qdyaweensd ekiriytcvl
      841 hllsamsqet ylyhvdkvds ndslyggdak flaennklce tvmaqilehl ktlakdealk
      901 rqsslglsff nsilahgdlr nnrlnqlsvs lwhlaqrhgc vdtrtmvktl eyikkqskqp
      961 nmghltelal rlplqtrt
//
LOCUS       XP_061008926             976 aa            linear   MAM 02-DEC-2023
DEFINITION  VPS35 endosomal protein-sorting factor-like isoform X2 [Dama dama].
ACCESSION   XP_061008926
VERSION     XP_061008926.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152943.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..976
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..976
                     /product="VPS35 endosomal protein-sorting factor-like
                     isoform X2"
                     /calculated_mol_wt=110873
     CDS             1..976
                     /gene="VPS35L"
                     /coded_by="XM_061152943.1:62..2992"
                     /db_xref="GeneID:133063498"
ORIGIN      
        1 micgpyleqp evrpssewrh srnrnykaef ascrleavpl efgdyhplkp itvtesktkk
       61 vsrkgstsst sssssssvvd plssvldgtd plsmfaasad patlaaamdn srkkrdrddn
      121 sivgsdfepw askrgeilar yttteklsin lfmgsekgka gtatsamsek vrtrleeldd
      181 feegsqkell nltqqdyvnr ieelnqslkd awasdqkvka lkiviqcskl lsdtsviqfy
      241 pskfvlitdi ldtfgklvye rifsmcvdnr svlpdhfspe nvndtaketc lnwffkiasi
      301 reliprfyve asilkcnkfl sktgiseclp rltcmvrgig dplasvyara ylcrvgmeva
      361 phlkeslnkn ffdflltfkq ihgdtvqnql vlqgvelpsy lplyspamdw vfqcvsyrap
      421 ealltemmer ckklgnnall lnsvmsafra efiatrsmdf igmikecdes gfpkhllfrs
      481 lglnlaladp pesdrlqiln eawkvitklk npqdyincae vwveytckhf tkrevntvla
      541 dvikhmtpdr afedsypqlq siikkviahf hdfsvlfsve kflpfldmfq kesvrvevck
      601 cimevfikhq qeptkdpvil nallhvcktm hdsvnaltle dekrmlayli ngfikmvsfg
      661 rdfeqqlsfy vetrsmfcnl epvlvqlihs vnrlametrk vmkgnhsrkt aafvracvay
      721 cfitipslvg iftrlnlylh sgqvalanqc fsqadaffka aislvpevpk minidgkmrp
      781 sesflleflc nffstllivp dhpehgvlfl vrellnvvqd yaweensdek iriytcvlhl
      841 lsamsqetyl yhvdkvdsnd slyggdakfl aennklcetv maqilehlkt lakdealkrq
      901 sslglsffns ilahgdlrnn rlnqlsvslw hlaqrhgcvd trtmvktley ikkqskqpnm
      961 ghltelalrl plqtrt
//
LOCUS       XP_061008928             963 aa            linear   MAM 02-DEC-2023
DEFINITION  VPS35 endosomal protein-sorting factor-like isoform X3 [Dama dama].
ACCESSION   XP_061008928
VERSION     XP_061008928.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152945.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..963
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..963
                     /product="VPS35 endosomal protein-sorting factor-like
                     isoform X3"
                     /calculated_mol_wt=109317
     CDS             1..963
                     /gene="VPS35L"
                     /coded_by="XM_061152945.1:22..2913"
                     /db_xref="GeneID:133063498"
ORIGIN      
        1 maafpwhsrn rnykaefasc rleavplefg dyhplkpitv tesktkkvsr kgstsstsss
       61 ssssvvdpls svldgtdpls mfaasadpat laaamdnsrk krdrddnsiv gsdfepwask
      121 rgeilarytt teklsinlfm gsekgkagta tsamsekvrt rleelddfee gsqkellnlt
      181 qqdyvnriee lnqslkdawa sdqkvkalki viqcskllsd tsviqfypsk fvlitdildt
      241 fgklvyerif smcvdnrsvl pdhfspenvn dtaketclnw ffkiasirel iprfyveasi
      301 lkcnkflskt giseclprlt cmvrgigdpl asvyaraylc rvgmevaphl keslnknffd
      361 flltfkqihg dtvqnqlvlq gvelpsylpl yspamdwvfq cvsyrapeal ltemmerckk
      421 lgnnalllns vmsafraefi atrsmdfigm ikecdesgfp khllfrslgl nlaladppes
      481 drlqilneaw kvitklknpq dyincaevwv eytckhftkr evntvladvi khmtpdrafe
      541 dsypqlqsii kkviahfhdf svlfsvekfl pfldmfqkes vrvevckcim evfikhqqep
      601 tkdpvilnal lhvcktmhds vnaltledek rmlaylingf ikmvsfgrdf eqqlsfyvet
      661 rsmfcnlepv lvqlihsvnr lametrkvmk gnhsrktaaf vracvaycfi tipslvgift
      721 rlnlylhsgq valanqcfsq adaffkaais lvpevpkmin idgkmrpses flleflcnff
      781 stllivpdhp ehgvlflvre llnvvqdyaw eensdekiri ytcvlhllsa msqetylyhv
      841 dkvdsndsly ggdakflaen nklcetvmaq ilehlktlak dealkrqssl glsffnsila
      901 hgdlrnnrln qlsvslwhla qrhgcvdtrt mvktleyikk qskqpnmghl telalrlplq
      961 trt
//
LOCUS       XP_061008929             883 aa            linear   MAM 02-DEC-2023
DEFINITION  VPS35 endosomal protein-sorting factor-like isoform X4 [Dama dama].
ACCESSION   XP_061008929
VERSION     XP_061008929.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152946.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..883
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..883
                     /product="VPS35 endosomal protein-sorting factor-like
                     isoform X4"
                     /calculated_mol_wt=100672
     CDS             1..883
                     /gene="VPS35L"
                     /coded_by="XM_061152946.1:267..2918"
                     /db_xref="GeneID:133063498"
ORIGIN      
        1 mfaasadpat laaamdnsrk krdrddnsiv gsdfepwask rgeilarytt teklsinlfm
       61 gsekgkagta tsamsekvrt rleelddfee gsqkellnlt qqdyvnriee lnqslkdawa
      121 sdqkvkalki viqcskllsd tsviqfypsk fvlitdildt fgklvyerif smcvdnrsvl
      181 pdhfspenvn dtaketclnw ffkiasirel iprfyveasi lkcnkflskt giseclprlt
      241 cmvrgigdpl asvyaraylc rvgmevaphl keslnknffd flltfkqihg dtvqnqlvlq
      301 gvelpsylpl yspamdwvfq cvsyrapeal ltemmerckk lgnnalllns vmsafraefi
      361 atrsmdfigm ikecdesgfp khllfrslgl nlaladppes drlqilneaw kvitklknpq
      421 dyincaevwv eytckhftkr evntvladvi khmtpdrafe dsypqlqsii kkviahfhdf
      481 svlfsvekfl pfldmfqkes vrvevckcim evfikhqqep tkdpvilnal lhvcktmhds
      541 vnaltledek rmlaylingf ikmvsfgrdf eqqlsfyvet rsmfcnlepv lvqlihsvnr
      601 lametrkvmk gnhsrktaaf vracvaycfi tipslvgift rlnlylhsgq valanqcfsq
      661 adaffkaais lvpevpkmin idgkmrpses flleflcnff stllivpdhp ehgvlflvre
      721 llnvvqdyaw eensdekiri ytcvlhllsa msqetylyhv dkvdsndsly ggdakflaen
      781 nklcetvmaq ilehlktlak dealkrqssl glsffnsila hgdlrnnrln qlsvslwhla
      841 qrhgcvdtrt mvktleyikk qskqpnmghl telalrlplq trt
//
LOCUS       XP_061008930             533 aa            linear   MAM 02-DEC-2023
DEFINITION  lysine-rich nucleolar protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061008930
VERSION     XP_061008930.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152947.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..533
                     /product="lysine-rich nucleolar protein 1 isoform X1"
                     /calculated_mol_wt=59351
     Region          437..510
                     /region_name="SMAP"
                     /note="Small acidic protein family; pfam15477"
                     /db_xref="CDD:464738"
     CDS             1..533
                     /gene="KNOP1"
                     /coded_by="XM_061152947.1:65..1666"
                     /db_xref="GeneID:133063499"
ORIGIN      
        1 mhdsletvps krwalrptap gaamaavmaa vstatagpkr prpgrnriwq grtaesrlts
       61 gsrrrglsrg ggehwplgmi kahkgevglg lpekkkkkkk kvvkepetqy svlnsdsyfa
      121 evcprvtppl kdviqeqapk mslvkkkkkk kghstvceeh lepeitlrag qtewsrsprt
      181 qapglsesls aerkkrksvs pgsrvktspd prqdeevtra gkklkkhkke kkakeatafs
      241 ggdpwfceag nalythpvgk dgvqeqaasg qkrkqgspre hsvkmkkkkk kkkihwegdp
      301 alahpecsws lesspakgsk kkpvrveape yipigdgpta svkkkvkskk rveqadtees
      361 alkrkkkkrq eskvaeepwe eepdtdlevv lekkgnmdea hidqvrrkal qeeidresgk
      421 teasdtktwt gtqfgqwdta gfeneeqklk flklmggfkn lppsfsrpst tearpnmals
      481 kkaadtlqrn lqqdydrals wkysrgaglg fssapakvfy idrnasksik fed
//
LOCUS       XP_061008931             455 aa            linear   MAM 02-DEC-2023
DEFINITION  lysine-rich nucleolar protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061008931
VERSION     XP_061008931.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152948.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..455
                     /product="lysine-rich nucleolar protein 1 isoform X2"
                     /calculated_mol_wt=51024
     Region          359..432
                     /region_name="SMAP"
                     /note="Small acidic protein family; pfam15477"
                     /db_xref="CDD:464738"
     CDS             1..455
                     /gene="KNOP1"
                     /coded_by="XM_061152948.1:214..1581"
                     /db_xref="GeneID:133063499"
ORIGIN      
        1 mikahkgevg lglpekkkkk kkkvvkepet qysvlnsdsy faevcprvtp plkdviqeqa
       61 pkmslvkkkk kkkghstvce ehlepeitlr agqtewsrsp rtqapglses lsaerkkrks
      121 vspgsrvkts pdprqdeevt ragkklkkhk kekkakeata fsggdpwfce agnalythpv
      181 gkdgvqeqaa sgqkrkqgsp rehsvkmkkk kkkkkihweg dpalahpecs wslesspakg
      241 skkkpvrvea peyipigdgp tasvkkkvks kkrveqadte esalkrkkkk rqeskvaeep
      301 weeepdtdle vvlekkgnmd eahidqvrrk alqeeidres gkteasdtkt wtgtqfgqwd
      361 tagfeneeqk lkflklmggf knlppsfsrp sttearpnma lskkaadtlq rnlqqdydra
      421 lswkysrgag lgfssapakv fyidrnasks ikfed
//
LOCUS       XP_061008932             455 aa            linear   MAM 02-DEC-2023
DEFINITION  lysine-rich nucleolar protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061008932
VERSION     XP_061008932.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152949.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..455
                     /product="lysine-rich nucleolar protein 1 isoform X2"
                     /calculated_mol_wt=51024
     Region          359..432
                     /region_name="SMAP"
                     /note="Small acidic protein family; pfam15477"
                     /db_xref="CDD:464738"
     CDS             1..455
                     /gene="KNOP1"
                     /coded_by="XM_061152949.1:279..1646"
                     /db_xref="GeneID:133063499"
ORIGIN      
        1 mikahkgevg lglpekkkkk kkkvvkepet qysvlnsdsy faevcprvtp plkdviqeqa
       61 pkmslvkkkk kkkghstvce ehlepeitlr agqtewsrsp rtqapglses lsaerkkrks
      121 vspgsrvkts pdprqdeevt ragkklkkhk kekkakeata fsggdpwfce agnalythpv
      181 gkdgvqeqaa sgqkrkqgsp rehsvkmkkk kkkkkihweg dpalahpecs wslesspakg
      241 skkkpvrvea peyipigdgp tasvkkkvks kkrveqadte esalkrkkkk rqeskvaeep
      301 weeepdtdle vvlekkgnmd eahidqvrrk alqeeidres gkteasdtkt wtgtqfgqwd
      361 tagfeneeqk lkflklmggf knlppsfsrp sttearpnma lskkaadtlq rnlqqdydra
      421 lswkysrgag lgfssapakv fyidrnasks ikfed
//
LOCUS       XP_061008933             418 aa            linear   MAM 02-DEC-2023
DEFINITION  G-protein coupled receptor family C group 5 member B isoform X1
            [Dama dama].
ACCESSION   XP_061008933
VERSION     XP_061008933.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152950.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..418
                     /product="G-protein coupled receptor family C group 5
                     member B isoform X1"
                     /calculated_mol_wt=46575
     Region          77..320
                     /region_name="7tmC_RAIG2_GPRC5B"
                     /note="retinoic acid-inducible orphan G-protein-coupled
                     receptor 2; class C family of seven-transmembrane G
                     protein-coupled receptors, group 5, member B; cd15278"
                     /db_xref="CDD:320405"
     Region          77..102
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320405"
     Site            order(80,83..84,87..88,90..91,127,131,134..135,143,147)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:320405"
     Region          116..137
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320405"
     Site            order(136,148..149,152..153,156,218,223,226..227,230,266,
                     269..270,273,277,291..292,295,298,302)
                     /site_type="other"
                     /note="putative allosteric modulator binding site
                     [chemical binding]"
                     /db_xref="CDD:320405"
     Region          146..170
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320405"
     Region          187..203
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320405"
     Region          219..242
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320405"
     Region          255..278
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320405"
     Region          289..314
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320405"
     CDS             1..418
                     /gene="GPRC5B"
                     /coded_by="XM_061152950.1:55..1311"
                     /db_xref="GeneID:133063501"
ORIGIN      
        1 mamgmqhefh qqafqcvels sesisrdher kmrthqalaf lllfviasga senastsrgc
       61 gldllpqyvs lcdldtiwgi vveavagaga litlllmlil lvrlpfikdk ekkdpvglhf
      121 lfllgtlglf gltfafiire deticsvrrf lwgvlfalcf scllsqawrv rrlvrhgksp
      181 sgwqllgmal clmlvqviia iewlvltvlr dakpacayep mdfamaliyd mvllvatlgl
      241 affslcgkfk kwkqngvcil vtaflsvliw vawmtmylfg naelqqgdaw gdptlaitlv
      301 asgwvfvifh aipeihctil papqentpny fdtsqprmre tafeedvqlp rtymenkafs
      361 mdehnaalrt agfrngslgn rpsapfrsnv yqptemavvl nggtiptapp sytgrhlw
//
LOCUS       XP_061008934             401 aa            linear   MAM 02-DEC-2023
DEFINITION  G-protein coupled receptor family C group 5 member B isoform X2
            [Dama dama].
ACCESSION   XP_061008934
VERSION     XP_061008934.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152951.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..401
                     /product="G-protein coupled receptor family C group 5
                     member B isoform X2"
                     /calculated_mol_wt=44748
     Region          60..303
                     /region_name="7tmC_RAIG2_GPRC5B"
                     /note="retinoic acid-inducible orphan G-protein-coupled
                     receptor 2; class C family of seven-transmembrane G
                     protein-coupled receptors, group 5, member B; cd15278"
                     /db_xref="CDD:320405"
     Region          60..85
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320405"
     Site            order(63,66..67,70..71,73..74,110,114,117..118,126,130)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:320405"
     Region          99..120
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320405"
     Site            order(119,131..132,135..136,139,201,206,209..210,213,249,
                     252..253,256,260,274..275,278,281,285)
                     /site_type="other"
                     /note="putative allosteric modulator binding site
                     [chemical binding]"
                     /db_xref="CDD:320405"
     Region          129..153
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320405"
     Region          170..186
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320405"
     Region          202..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320405"
     Region          238..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320405"
     Region          272..297
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320405"
     CDS             1..401
                     /gene="GPRC5B"
                     /coded_by="XM_061152951.1:137..1342"
                     /db_xref="GeneID:133063501"
ORIGIN      
        1 mrrynlekis kerkmrthqa laflllfvia sgasenasts rgcgldllpq yvslcdldti
       61 wgivveavag agalitlllm lillvrlpfi kdkekkdpvg lhflfllgtl glfgltfafi
      121 iredeticsv rrflwgvlfa lcfscllsqa wrvrrlvrhg kspsgwqllg malclmlvqv
      181 iiaiewlvlt vlrdakpaca yepmdfamal iydmvllvat lglaffslcg kfkkwkqngv
      241 cilvtaflsv liwvawmtmy lfgnaelqqg dawgdptlai tlvasgwvfv ifhaipeihc
      301 tilpapqent pnyfdtsqpr mretafeedv qlprtymenk afsmdehnaa lrtagfrngs
      361 lgnrpsapfr snvyqptema vvlnggtipt appsytgrhl w
//
LOCUS       XP_061008935             399 aa            linear   MAM 02-DEC-2023
DEFINITION  G-protein coupled receptor family C group 5 member B isoform X3
            [Dama dama].
ACCESSION   XP_061008935
VERSION     XP_061008935.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152952.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..399
                     /product="G-protein coupled receptor family C group 5
                     member B isoform X3"
                     /calculated_mol_wt=44490
     Region          58..301
                     /region_name="7tmC_RAIG2_GPRC5B"
                     /note="retinoic acid-inducible orphan G-protein-coupled
                     receptor 2; class C family of seven-transmembrane G
                     protein-coupled receptors, group 5, member B; cd15278"
                     /db_xref="CDD:320405"
     Region          58..83
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320405"
     Site            order(61,64..65,68..69,71..72,108,112,115..116,124,128)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:320405"
     Region          97..118
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320405"
     Site            order(117,129..130,133..134,137,199,204,207..208,211,247,
                     250..251,254,258,272..273,276,279,283)
                     /site_type="other"
                     /note="putative allosteric modulator binding site
                     [chemical binding]"
                     /db_xref="CDD:320405"
     Region          127..151
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320405"
     Region          168..184
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320405"
     Region          200..223
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320405"
     Region          236..259
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320405"
     Region          270..295
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320405"
     CDS             1..399
                     /gene="GPRC5B"
                     /coded_by="XM_061152952.1:16..1215"
                     /db_xref="GeneID:133063501"
ORIGIN      
        1 mterlnwtee rkmrthqala flllfviasg asenastsrg cgldllpqyv slcdldtiwg
       61 ivveavagag alitlllmli llvrlpfikd kekkdpvglh flfllgtlgl fgltfafiir
      121 edeticsvrr flwgvlfalc fscllsqawr vrrlvrhgks psgwqllgma lclmlvqvii
      181 aiewlvltvl rdakpacaye pmdfamaliy dmvllvatlg laffslcgkf kkwkqngvci
      241 lvtaflsvli wvawmtmylf gnaelqqgda wgdptlaitl vasgwvfvif haipeihcti
      301 lpapqentpn yfdtsqprmr etafeedvql prtymenkaf smdehnaalr tagfrngslg
      361 nrpsapfrsn vyqptemavv lnggtiptap psytgrhlw
//
LOCUS       XP_061008936             387 aa            linear   MAM 02-DEC-2023
DEFINITION  G-protein coupled receptor family C group 5 member B isoform X4
            [Dama dama].
ACCESSION   XP_061008936
VERSION     XP_061008936.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152953.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..387
                     /product="G-protein coupled receptor family C group 5
                     member B isoform X4"
                     /calculated_mol_wt=42915
     Region          46..289
                     /region_name="7tmC_RAIG2_GPRC5B"
                     /note="retinoic acid-inducible orphan G-protein-coupled
                     receptor 2; class C family of seven-transmembrane G
                     protein-coupled receptors, group 5, member B; cd15278"
                     /db_xref="CDD:320405"
     Region          46..71
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320405"
     Site            order(49,52..53,56..57,59..60,96,100,103..104,112,116)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:320405"
     Region          85..106
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320405"
     Site            order(105,117..118,121..122,125,187,192,195..196,199,235,
                     238..239,242,246,260..261,264,267,271)
                     /site_type="other"
                     /note="putative allosteric modulator binding site
                     [chemical binding]"
                     /db_xref="CDD:320405"
     Region          115..139
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320405"
     Region          156..172
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320405"
     Region          188..211
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320405"
     Region          224..247
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320405"
     Region          258..283
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320405"
     CDS             1..387
                     /gene="GPRC5B"
                     /coded_by="XM_061152953.1:114..1277"
                     /db_xref="GeneID:133063501"
ORIGIN      
        1 mrthqalafl llfviasgas enastsrgcg ldllpqyvsl cdldtiwgiv veavagagal
       61 itlllmlill vrlpfikdke kkdpvglhfl fllgtlglfg ltfafiired eticsvrrfl
      121 wgvlfalcfs cllsqawrvr rlvrhgksps gwqllgmalc lmlvqviiai ewlvltvlrd
      181 akpacayepm dfamaliydm vllvatlgla ffslcgkfkk wkqngvcilv taflsvliwv
      241 awmtmylfgn aelqqgdawg dptlaitlva sgwvfvifha ipeihctilp apqentpnyf
      301 dtsqprmret afeedvqlpr tymenkafsm dehnaalrta gfrngslgnr psapfrsnvy
      361 qptemavvln ggtiptapps ytgrhlw
//
LOCUS       XP_061008937             643 aa            linear   MAM 02-DEC-2023
DEFINITION  uromodulin [Dama dama].
ACCESSION   XP_061008937
VERSION     XP_061008937.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152954.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..643
                     /product="uromodulin"
                     /calculated_mol_wt=69296
     Region          37..65
                     /region_name="EGF_3"
                     /note="EGF domain; pfam12947"
                     /db_xref="CDD:463759"
     Region          67..99
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF domain; pfam07645"
                     /db_xref="CDD:429571"
     Site            order(67,70,87)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          110..151
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(110,113,130)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          336..585
                     /region_name="ZP"
                     /note="Zona pellucida (ZP) domain; smart00241"
                     /db_xref="CDD:214579"
     CDS             1..643
                     /gene="UMOD"
                     /coded_by="XM_061152954.1:1..1932"
                     /db_xref="GeneID:133063503"
ORIGIN      
        1 mkclfsptlm wmavavtswv iipaatdass akscsechan atctvdgaat tcacqegfsg
       61 dglecadlde caipgahncs tssscvntlg sytcvcpegf llspglgcvd vdecaepgls
      121 rchalatcvn gegnyscvcp agyrgdgrhc ecspgscgpg ldcvqegdal vcadpcqahr
      181 ildeywrsae ygpgyvcdvs lggwyrfvgq ggvrlpetcv ptlhcntaap mwlngthpss
      241 degivnrvac ahwsgdcclw dapvqvkaca ggyyvynlta ppechlayct dpssvegtce
      301 ecrvdedcks dngewhcrcq qdsnvtdlsl lerrlecgvd diklslskcq lkslgfekvf
      361 mylhdsqcsg fpergdrdwm svvtparagp cgtvmtrnet hatysntlyl adeiiirdln
      421 irinfacsyp ldmkvslkts lqpmvsalni smggtgtftv rmalfqspay tqpyqgssvt
      481 lsteaflyvg tmldggdlsr fvllmtncya tpssnatdpl kyfiiqdrcp rtadstiqve
      541 engespqgrf svqmfrfagn ydlvylhcev ylcdtvnekc rptcpetrfr sgsiidqtrv
      601 lnlgpitrkg gqaavsraap sslgllqvwl plllsatltl tpp
//
LOCUS       XP_061008938             579 aa            linear   MAM 02-DEC-2023
DEFINITION  pancreatic secretory granule membrane major glycoprotein GP2
            isoform X1 [Dama dama].
ACCESSION   XP_061008938
VERSION     XP_061008938.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152955.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..579
                     /product="pancreatic secretory granule membrane major
                     glycoprotein GP2 isoform X1"
                     /calculated_mol_wt=63631
     Region          269..520
                     /region_name="Zona_pellucida"
                     /note="Zona pellucida-like domain; pfam00100"
                     /db_xref="CDD:459673"
     CDS             1..579
                     /gene="GP2"
                     /coded_by="XM_061152955.1:16..1755"
                     /db_xref="GeneID:133063504"
ORIGIN      
        1 mlllfiekhl hggetagrvt crgvvgrgcg nkgtfpsppf lratwmgngn krtvhsrcaf
       61 pqsekeehst fsppgysnst dtgsyeedld cgapgtpdaq fcfdpcqnyt llnepfrste
      121 ntedlqgcds dkhgwyrfvg dggvrmpesc vptfrcqtsa plwlngthps lgegivsrta
      181 cahwsanccl wktevlvkac pgpyhvyqle gtpqcnlryc tdpatsedkc drtcrpeeec
      241 rlvsgtwgcf credlnvsdv hslqpqldcg dreikvsldk cllgslgfgd evhaylrdgn
      301 wncsslgqse eenwisvtnp tqagacgnil esnqthaiyk ntlslvndfi irdtilsisf
      361 qcaypldmkv slqtalqpiv sslnitmdge geftvrmalf qdqdyrspye gtavvlsves
      421 mlyvgailer gdtsrfnlvl kncyatptgd ktdpvkyfii rnscpnqrds tisveengvs
      481 aesrfsvqmf rfagnydlvf lhcevslcdf ikeecqpscs rsqlrsegva idparvldlg
      541 pitrkgaqal gvmsgtpsta gflvvwsmvl lpvllagll
//
LOCUS       XP_061008939             534 aa            linear   MAM 02-DEC-2023
DEFINITION  pancreatic secretory granule membrane major glycoprotein GP2
            isoform X2 [Dama dama].
ACCESSION   XP_061008939
VERSION     XP_061008939.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152956.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..534
                     /product="pancreatic secretory granule membrane major
                     glycoprotein GP2 isoform X2"
                     /calculated_mol_wt=58849
     Region          224..475
                     /region_name="Zona_pellucida"
                     /note="Zona pellucida-like domain; pfam00100"
                     /db_xref="CDD:459673"
     CDS             1..534
                     /gene="GP2"
                     /coded_by="XM_061152956.1:248..1852"
                     /db_xref="GeneID:133063504"
ORIGIN      
        1 msqllermts ilwlalasyi ltlssteqqg ysnstdtgsy eedldcgapg tpdaqfcfdp
       61 cqnytllnep frstentedl qgcdsdkhgw yrfvgdggvr mpescvptfr cqtsaplwln
      121 gthpslgegi vsrtacahws ancclwktev lvkacpgpyh vyqlegtpqc nlryctdpat
      181 sedkcdrtcr peeecrlvsg twgcfcredl nvsdvhslqp qldcgdreik vsldkcllgs
      241 lgfgdevhay lrdgnwncss lgqseeenwi svtnptqaga cgnilesnqt haiykntlsl
      301 vndfiirdti lsisfqcayp ldmkvslqta lqpivsslni tmdgegeftv rmalfqdqdy
      361 rspyegtavv lsvesmlyvg ailergdtsr fnlvlkncya tptgdktdpv kyfiirnscp
      421 nqrdstisve engvsaesrf svqmfrfagn ydlvflhcev slcdfikeec qpscsrsqlr
      481 segvaidpar vldlgpitrk gaqalgvmsg tpstagflvv wsmvllpvll agll
//
LOCUS       XP_061008940             534 aa            linear   MAM 02-DEC-2023
DEFINITION  pancreatic secretory granule membrane major glycoprotein GP2
            isoform X2 [Dama dama].
ACCESSION   XP_061008940
VERSION     XP_061008940.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152957.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..534
                     /product="pancreatic secretory granule membrane major
                     glycoprotein GP2 isoform X2"
                     /calculated_mol_wt=58849
     Region          224..475
                     /region_name="Zona_pellucida"
                     /note="Zona pellucida-like domain; pfam00100"
                     /db_xref="CDD:459673"
     CDS             1..534
                     /gene="GP2"
                     /coded_by="XM_061152957.1:233..1837"
                     /db_xref="GeneID:133063504"
ORIGIN      
        1 msqllermts ilwlalasyi ltlssteqqg ysnstdtgsy eedldcgapg tpdaqfcfdp
       61 cqnytllnep frstentedl qgcdsdkhgw yrfvgdggvr mpescvptfr cqtsaplwln
      121 gthpslgegi vsrtacahws ancclwktev lvkacpgpyh vyqlegtpqc nlryctdpat
      181 sedkcdrtcr peeecrlvsg twgcfcredl nvsdvhslqp qldcgdreik vsldkcllgs
      241 lgfgdevhay lrdgnwncss lgqseeenwi svtnptqaga cgnilesnqt haiykntlsl
      301 vndfiirdti lsisfqcayp ldmkvslqta lqpivsslni tmdgegeftv rmalfqdqdy
      361 rspyegtavv lsvesmlyvg ailergdtsr fnlvlkncya tptgdktdpv kyfiirnscp
      421 nqrdstisve engvsaesrf svqmfrfagn ydlvflhcev slcdfikeec qpscsrsqlr
      481 segvaidpar vldlgpitrk gaqalgvmsg tpstagflvv wsmvllpvll agll
//
LOCUS       XP_061008942             534 aa            linear   MAM 02-DEC-2023
DEFINITION  pancreatic secretory granule membrane major glycoprotein GP2
            isoform X2 [Dama dama].
ACCESSION   XP_061008942
VERSION     XP_061008942.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152959.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..534
                     /product="pancreatic secretory granule membrane major
                     glycoprotein GP2 isoform X2"
                     /calculated_mol_wt=58849
     Region          224..475
                     /region_name="Zona_pellucida"
                     /note="Zona pellucida-like domain; pfam00100"
                     /db_xref="CDD:459673"
     CDS             1..534
                     /gene="GP2"
                     /coded_by="XM_061152959.1:229..1833"
                     /db_xref="GeneID:133063504"
ORIGIN      
        1 msqllermts ilwlalasyi ltlssteqqg ysnstdtgsy eedldcgapg tpdaqfcfdp
       61 cqnytllnep frstentedl qgcdsdkhgw yrfvgdggvr mpescvptfr cqtsaplwln
      121 gthpslgegi vsrtacahws ancclwktev lvkacpgpyh vyqlegtpqc nlryctdpat
      181 sedkcdrtcr peeecrlvsg twgcfcredl nvsdvhslqp qldcgdreik vsldkcllgs
      241 lgfgdevhay lrdgnwncss lgqseeenwi svtnptqaga cgnilesnqt haiykntlsl
      301 vndfiirdti lsisfqcayp ldmkvslqta lqpivsslni tmdgegeftv rmalfqdqdy
      361 rspyegtavv lsvesmlyvg ailergdtsr fnlvlkncya tptgdktdpv kyfiirnscp
      421 nqrdstisve engvsaesrf svqmfrfagn ydlvflhcev slcdfikeec qpscsrsqlr
      481 segvaidpar vldlgpitrk gaqalgvmsg tpstagflvv wsmvllpvll agll
//
LOCUS       XP_061008943             534 aa            linear   MAM 02-DEC-2023
DEFINITION  pancreatic secretory granule membrane major glycoprotein GP2
            isoform X2 [Dama dama].
ACCESSION   XP_061008943
VERSION     XP_061008943.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152960.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..534
                     /product="pancreatic secretory granule membrane major
                     glycoprotein GP2 isoform X2"
                     /calculated_mol_wt=58849
     Region          224..475
                     /region_name="Zona_pellucida"
                     /note="Zona pellucida-like domain; pfam00100"
                     /db_xref="CDD:459673"
     CDS             1..534
                     /gene="GP2"
                     /coded_by="XM_061152960.1:229..1833"
                     /db_xref="GeneID:133063504"
ORIGIN      
        1 msqllermts ilwlalasyi ltlssteqqg ysnstdtgsy eedldcgapg tpdaqfcfdp
       61 cqnytllnep frstentedl qgcdsdkhgw yrfvgdggvr mpescvptfr cqtsaplwln
      121 gthpslgegi vsrtacahws ancclwktev lvkacpgpyh vyqlegtpqc nlryctdpat
      181 sedkcdrtcr peeecrlvsg twgcfcredl nvsdvhslqp qldcgdreik vsldkcllgs
      241 lgfgdevhay lrdgnwncss lgqseeenwi svtnptqaga cgnilesnqt haiykntlsl
      301 vndfiirdti lsisfqcayp ldmkvslqta lqpivsslni tmdgegeftv rmalfqdqdy
      361 rspyegtavv lsvesmlyvg ailergdtsr fnlvlkncya tptgdktdpv kyfiirnscp
      421 nqrdstisve engvsaesrf svqmfrfagn ydlvflhcev slcdfikeec qpscsrsqlr
      481 segvaidpar vldlgpitrk gaqalgvmsg tpstagflvv wsmvllpvll agll
//
LOCUS       XP_061008944             534 aa            linear   MAM 02-DEC-2023
DEFINITION  pancreatic secretory granule membrane major glycoprotein GP2
            isoform X2 [Dama dama].
ACCESSION   XP_061008944
VERSION     XP_061008944.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152961.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..534
                     /product="pancreatic secretory granule membrane major
                     glycoprotein GP2 isoform X2"
                     /calculated_mol_wt=58849
     Region          224..475
                     /region_name="Zona_pellucida"
                     /note="Zona pellucida-like domain; pfam00100"
                     /db_xref="CDD:459673"
     CDS             1..534
                     /gene="GP2"
                     /coded_by="XM_061152961.1:207..1811"
                     /db_xref="GeneID:133063504"
ORIGIN      
        1 msqllermts ilwlalasyi ltlssteqqg ysnstdtgsy eedldcgapg tpdaqfcfdp
       61 cqnytllnep frstentedl qgcdsdkhgw yrfvgdggvr mpescvptfr cqtsaplwln
      121 gthpslgegi vsrtacahws ancclwktev lvkacpgpyh vyqlegtpqc nlryctdpat
      181 sedkcdrtcr peeecrlvsg twgcfcredl nvsdvhslqp qldcgdreik vsldkcllgs
      241 lgfgdevhay lrdgnwncss lgqseeenwi svtnptqaga cgnilesnqt haiykntlsl
      301 vndfiirdti lsisfqcayp ldmkvslqta lqpivsslni tmdgegeftv rmalfqdqdy
      361 rspyegtavv lsvesmlyvg ailergdtsr fnlvlkncya tptgdktdpv kyfiirnscp
      421 nqrdstisve engvsaesrf svqmfrfagn ydlvflhcev slcdfikeec qpscsrsqlr
      481 segvaidpar vldlgpitrk gaqalgvmsg tpstagflvv wsmvllpvll agll
//
LOCUS       XP_061008945             534 aa            linear   MAM 02-DEC-2023
DEFINITION  pancreatic secretory granule membrane major glycoprotein GP2
            isoform X3 [Dama dama].
ACCESSION   XP_061008945
VERSION     XP_061008945.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152962.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..534
                     /product="pancreatic secretory granule membrane major
                     glycoprotein GP2 isoform X3"
                     /calculated_mol_wt=58780
     Region          224..475
                     /region_name="Zona_pellucida"
                     /note="Zona pellucida-like domain; pfam00100"
                     /db_xref="CDD:459673"
     CDS             1..534
                     /gene="GP2"
                     /coded_by="XM_061152962.1:142..1746"
                     /db_xref="GeneID:133063504"
ORIGIN      
        1 mgngnkrtvh srcafpqsek eehstfsppg ysnstdtgsy eedldcgapg tpdaqfcfdp
       61 cqnytllnep frstentedl qgcdsdkhgw yrfvgdggvr mpescvptfr cqtsaplwln
      121 gthpslgegi vsrtacahws ancclwktev lvkacpgpyh vyqlegtpqc nlryctdpat
      181 sedkcdrtcr peeecrlvsg twgcfcredl nvsdvhslqp qldcgdreik vsldkcllgs
      241 lgfgdevhay lrdgnwncss lgqseeenwi svtnptqaga cgnilesnqt haiykntlsl
      301 vndfiirdti lsisfqcayp ldmkvslqta lqpivsslni tmdgegeftv rmalfqdqdy
      361 rspyegtavv lsvesmlyvg ailergdtsr fnlvlkncya tptgdktdpv kyfiirnscp
      421 nqrdstisve engvsaesrf svqmfrfagn ydlvflhcev slcdfikeec qpscsrsqlr
      481 segvaidpar vldlgpitrk gaqalgvmsg tpstagflvv wsmvllpvll agll
//
LOCUS       XP_061008946             534 aa            linear   MAM 02-DEC-2023
DEFINITION  pancreatic secretory granule membrane major glycoprotein GP2
            isoform X3 [Dama dama].
ACCESSION   XP_061008946
VERSION     XP_061008946.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152963.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..534
                     /product="pancreatic secretory granule membrane major
                     glycoprotein GP2 isoform X3"
                     /calculated_mol_wt=58780
     Region          224..475
                     /region_name="Zona_pellucida"
                     /note="Zona pellucida-like domain; pfam00100"
                     /db_xref="CDD:459673"
     CDS             1..534
                     /gene="GP2"
                     /coded_by="XM_061152963.1:108..1712"
                     /db_xref="GeneID:133063504"
ORIGIN      
        1 mgngnkrtvh srcafpqsek eehstfsppg ysnstdtgsy eedldcgapg tpdaqfcfdp
       61 cqnytllnep frstentedl qgcdsdkhgw yrfvgdggvr mpescvptfr cqtsaplwln
      121 gthpslgegi vsrtacahws ancclwktev lvkacpgpyh vyqlegtpqc nlryctdpat
      181 sedkcdrtcr peeecrlvsg twgcfcredl nvsdvhslqp qldcgdreik vsldkcllgs
      241 lgfgdevhay lrdgnwncss lgqseeenwi svtnptqaga cgnilesnqt haiykntlsl
      301 vndfiirdti lsisfqcayp ldmkvslqta lqpivsslni tmdgegeftv rmalfqdqdy
      361 rspyegtavv lsvesmlyvg ailergdtsr fnlvlkncya tptgdktdpv kyfiirnscp
      421 nqrdstisve engvsaesrf svqmfrfagn ydlvflhcev slcdfikeec qpscsrsqlr
      481 segvaidpar vldlgpitrk gaqalgvmsg tpstagflvv wsmvllpvll agll
//
LOCUS       XP_061008947             580 aa            linear   MAM 02-DEC-2023
DEFINITION  acyl-coenzyme A synthetase ACSM4, mitochondrial [Dama dama].
ACCESSION   XP_061008947
VERSION     XP_061008947.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152964.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..580
                     /product="acyl-coenzyme A synthetase ACSM4, mitochondrial"
                     /calculated_mol_wt=64798
     Region          48..577
                     /region_name="MACS_euk"
                     /note="Eukaryotic Medium-chain acyl-CoA synthetase (MACS
                     or ACSM); cd05928"
                     /db_xref="CDD:341251"
     Site            order(147,274..276,300,320,322,326,346..349,368..373,
                     376..377,392,455,467,470,476,478..481,510,541,546..547,
                     549,551)
                     /site_type="active"
                     /db_xref="CDD:341251"
     Site            order(226,229..234,236..237)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341251"
     Site            order(270,322..323,326,346,478..480,541,547)
                     /site_type="other"
                     /note="putative CoA binding site [chemical binding]"
                     /db_xref="CDD:341251"
     Site            order(346..349,368..373,392,455,467,470,476,481)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341251"
     CDS             1..580
                     /gene="LOC133063506"
                     /coded_by="XM_061152964.1:170..1912"
                     /db_xref="GeneID:133063506"
ORIGIN      
        1 mkiffryqtf rfvwltkpsg qrfhkshqpg apltladfea inrcerslpk nfnfagdvld
       61 qwsqkektge rpanpalwwv ngkgdevkws fgelgslsrk aanvltkpcg lergdrvavi
      121 lpripewwli svacmrtglv fmpgttqlta kdilyrlqas kakcivasde vipavesivs
      181 ecpdlktkll vsphsqngwl sfpelfqtas aehscvetgs qepmaiyfts gttgspkmaq
      241 hsqsslgigy tlcgrywldl kstdiiwnms dtgwikaaig smfsswlhga cvfvhrmaqf
      301 dtdafldtlt typittlcsa ptvyrmlvqk dlnrykfkkl rhcltggepl npevleqwkv
      361 qtglelyegy gqtevgiica nqkgqeikpg smgkgvlpyd vqiidengni lppgkegeia
      421 lrltstrpfc ffseyvdnpe ktaatirgnf yvtgdrgvmd sdgyfwfvgr addviissgy
      481 rigpfevesa liehpavves avvsspdpvr gevvkafvvl sapfksfnpe kltlelqdhv
      541 kkstapykyp rkvefvkelp ktitgkikrn vlrdhewgrt
//
LOCUS       XP_061008948             358 aa            linear   MAM 02-DEC-2023
DEFINITION  THUMP domain-containing protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061008948
VERSION     XP_061008948.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152965.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..358
                     /product="THUMP domain-containing protein 1 isoform X1"
                     /calculated_mol_wt=39635
     Region          45..255
                     /region_name="THUMP_THUMPD1_like"
                     /note="THUMP domain-containing protein 1-like; cd11717"
                     /db_xref="CDD:212586"
     CDS             1..358
                     /gene="THUMPD1"
                     /coded_by="XM_061152965.1:66..1142"
                     /db_xref="GeneID:133063507"
ORIGIN      
        1 maariqqspq pgggkrkgka qyvqakrarr wdgggprqle pglqgilitc nmnerkcvee
       61 aysllneygd dmygpekqfa dkdqqpsgse gedddveaal kkevgdikas temrlrrfqs
      121 vesgannvvf irtlgiepek lvhhilqdiy ktkkkktrvi lrmlpisgtc kafledmkky
      181 aetflepwfk apnkgtfqiv yksrnnshmn reevikelag ivgslnsenk vdltnpqytv
      241 vveiikavcc lsvvkdymlf rkynlqevvk sakdlsqlnp kqaaqtgngk eaklesgdks
      301 sqndpaegkn nqqvvpense elgptgsise thvvnegvak pelasqvteg sasnendl
//
LOCUS       XP_061008949             357 aa            linear   MAM 02-DEC-2023
DEFINITION  THUMP domain-containing protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061008949
VERSION     XP_061008949.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152966.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..357
                     /product="THUMP domain-containing protein 1 isoform X2"
                     /calculated_mol_wt=39507
     Region          45..254
                     /region_name="THUMP_THUMPD1_like"
                     /note="THUMP domain-containing protein 1-like; cd11717"
                     /db_xref="CDD:212586"
     CDS             1..357
                     /gene="THUMPD1"
                     /coded_by="XM_061152966.1:66..1139"
                     /db_xref="GeneID:133063507"
ORIGIN      
        1 maariqqspq pgggkrkgka qyvqakrarr wdgggprqle pglqgilitc nmnerkcvee
       61 aysllneygd dmygpekfad kdqqpsgseg edddveaalk kevgdikast emrlrrfqsv
      121 esgannvvfi rtlgiepekl vhhilqdiyk tkkkktrvil rmlpisgtck afledmkkya
      181 etflepwfka pnkgtfqivy ksrnnshmnr eevikelagi vgslnsenkv dltnpqytvv
      241 veiikavccl svvkdymlfr kynlqevvks akdlsqlnpk qaaqtgngke aklesgdkss
      301 qndpaegknn qqvvpensee lgptgsiset hvvnegvakp elasqvtegs asnendl
//
LOCUS       XP_061008950            4081 aa            linear   MAM 02-DEC-2023
DEFINITION  dynein axonemal heavy chain 3 [Dama dama].
ACCESSION   XP_061008950
VERSION     XP_061008950.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152967.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4081
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..4081
                     /product="dynein axonemal heavy chain 3"
                     /calculated_mol_wt=467830
     Region          824..1228
                     /region_name="DHC_N2"
                     /note="Dynein heavy chain, N-terminal region 2; pfam08393"
                     /db_xref="CDD:462462"
     Region          1027..3708
                     /region_name="DYN1"
                     /note="Dynein, heavy chain [Cytoskeleton]; COG5245"
                     /db_xref="CDD:227570"
     Region          1356..1682
                     /region_name="AAA_6"
                     /note="Hydrolytic ATP binding site of dynein motor region;
                     pfam12774"
                     /db_xref="CDD:463697"
     Region          2369..2629
                     /region_name="AAA_8"
                     /note="P-loop containing dynein motor region D4;
                     pfam12780"
                     /db_xref="CDD:463701"
     Region          3017..3238
                     /region_name="AAA_9"
                     /note="ATP-binding dynein motor region; pfam12781"
                     /db_xref="CDD:463702"
     Region          3776..4077
                     /region_name="Dynein_C"
                     /note="Dynein heavy chain C-terminal domain; pfam18199"
                     /db_xref="CDD:465677"
     CDS             1..4081
                     /gene="DNAH3"
                     /coded_by="XM_061152967.1:115..12360"
                     /db_xref="GeneID:133063509"
ORIGIN      
        1 msetgelagp vrmdnmndtd cssqkipksd siyymshsqm rpelpplpas aneepselyr
       61 tvmshsfypp lmqrtswtla apfkeqqhhc gpsdsianny sltardlklk dllkvyqpvt
      121 vsvprekivq glpsanksss epnkkkmkfs pkdkedltgm ksasttlpmk kevvtsltfp
      181 gsrpmspeeq idvmlqqeme iesketkpse sdleryyyyl tsgirkdmia peedkvmvri
      241 sklisntllt spfleplmaa lveekesdyy sslmksivdy ilmdpmerkr lfiqsipraf
      301 pqrvirapvp whsvyrnakk wneehlhtvn pmmlslkqlw fsefkdlrfv rtaellagkl
      361 plqpheyqdv iqkhcmetrq illnkwiptc aqlfvsrkeq wihfapksdy dssrnieeyf
      421 asvasfmslq lrelvinslk dlvsffmihk dgndfeepyq emeffipqli iiklevnepi
      481 ivfnpsfddc welirnsfle iiknskgipk vesilfpelk gynlilgtvn adeklvsdfv
      541 dqtfevfqkn qvgpykylnv ykkyddlldn taeqnitafl kenheiedfv mrinnikkrr
      601 neiasmhitv plamfcldtm tlnydlcera qnlkdrliqf qvdvnrdtnt sicnqyslia
      661 dkvseipint gelvfliefl kkssdvtvfk lrrqlrdaae rleflmdyad lpqediklns
      721 tlflwpdqie difensrnll lskrdqaemd likrcsefev klegyskele gfrkrevmtt
      781 eemknnvekl nelsknleqa lvefelinke eellekekst fpllqtvmin kvpyeqlwvt
      841 ayefstksee wmngplflln aeeiaeeign mwrtiykltk tladvpaprr laenvkikid
      901 kfkqhipilt iscnpgmkdr hwqqiseivg yeikptettc lsnmlefgfg kfieklepig
      961 aaaskeysle knlekmkldw vnmtfnfvky rdtdtsilca vddiqllldd hviktqtmcg
     1021 spfvkpiete crkweeklvr vqeildawlk cqvtwlylep ifssediiaq mpeegrkfai
     1081 vdnywkslms qavkdtrvlm aadqprmaer lqeanllled iqkglndyle kkrlffprff
     1141 flsndellei lsetkdplrv qphlkkcfeg iakleftdsl eivgmissek eivpfkqkiy
     1201 pvqakgmvek wlqqveqmml asmqeviklg ieayvqvprn qwvlqwpgqv vicvssifwt
     1261 kevsqaliek tlpdflkksn dqiaqivqlv rgklssgarl tlgaltvidv hardvvakls
     1321 ednvcdlndf qwisqlryyw dskdvqvqmi ttealygyey lgnsprlvit pltdrcyrtl
     1381 mgalklnlgg apegpagtgk tettkdlaka lakqcvvfnc sdgldykamg kffkglaqag
     1441 awacfdefnr ievevlsvva qqilsiqqai irklktfife gtelslnptc avfitmnpgy
     1501 agraelpdnl kalfrtvamm vpdyaligei slysmgflds rslaqkivat yrlcseqlss
     1561 qhhydygmra vksvltaagn lklkypeene svlllralld vnlakflaqd vplfqgiisd
     1621 lfpgvilpqp dyevfmevln anikkmklqp vpwfigkiiq iyemmlvrhg ymivgdpmgg
     1681 ktcaykvlaa algdlyeanq meefaveyki inpkaitmgq lygcfdqvsh ewtdgvlana
     1741 freqasslsd drkwiifdgp vdavwienmn tvlddnkklc lmsgeiiqms pkmslifepa
     1801 dleqaspatv srcgmiymep hqlgwkplkd symdtlpssl teehkelvnd mfmwlvqpcl
     1861 dftrlhckfv vqtspihlaf smmrlyssll deireaeeee selfegltsq qiflwlqglf
     1921 lfalvwtvag tinadsrkkf dlffrnlimg mdnnnprpks vkltknnifp ergsiydfyf
     1981 lkqasghwyt wteyitkeee nisanakvse liiptmetar qsfflktyld heipmlfvgp
     2041 tgtgksvitn nfllrlpknt ylpncinfsa rtsanqtqdi imskldrrrk glfgppigkk
     2101 avvfvddlnm pakevygaqp piellrqwid hgywfdkkdt nklditdvll vtamgppggg
     2161 rnditgrftr hlniisinaf eddiltkifs siadwhfgkg fdvvflrygk mmvqatmtiy
     2221 raavenflpt pskshyvfnl rdfsrviqgv llcphthlqd vekfirlwih evyrvfydrl
     2281 idhedrqvff nmvrettsnc fkqsvekvli hlsptgkivd dnirslffgd ffkpesdqki
     2341 ydeitdlkql tvvmeyylee fnniskapms lvmfrfaieh isricrvlkq dkghlllvgi
     2401 ggsgrqsask lstfmnsyel yqieitksys gndwredlkk imlqvgvatk stvflfadnq
     2461 ikdesfiedi nmllntgdvp nifpadekad ivekmqmaar tegekievtp lsmynffier
     2521 vkknlhivla mspigdafrn rlrmfpslin cctidwfqsw ptdalelvan kfledveldd
     2581 dirtevifmc kyfqesvkkl sldyynilrr hnyvtptsyl eliltfktll nkkrqevdmm
     2641 rnryltglqk lefaasqvav mqveltalqp qliqtseeta kmmvkieaet readakkllv
     2701 qadekeanaa aaiaqgikne cegdlaeamp aleaalaald tlnqtdislv ksmqnppgpv
     2761 klvmesicvm kglrperkpd psgsgkmied ywgvsrkilg dlkfleslkt ydkdnippvi
     2821 mkrirerfid hpdfqpavik nvssaceglc kwvramevyd rvakvvapkr erlkeaegkl
     2881 dtqmqklnqk raelklvedr lqalnddfee mntkkktleg nieicsqkli raeklisglg
     2941 gekdrwteaa rqlgirytnl tgdvllssgt vaylgaftvd yraecqkqwl aqckdrvipg
     3001 ssdfslsntl gdpvkirawq iaglpidsfs idngiivsns rrwalmidpq gqankwiknm
     3061 ekanklsvik fsdtnyvrtl ehalqfgapv llenvgeeld afiepillks tfkqqgveym
     3121 rlgeniieys rdfklyittr lrnphylpev avkvcllnfm itplglqdql lgivaakekp
     3181 eleekknkli vesaknkkhl keiedkilev lslsegnile detaikilss skvlseeise
     3241 kqeiasvtet qidetrmgyk pvavhsatif fcisdlahie pmyqysltwf inlymqslah
     3301 skkseelelr ieyiidhftl siynnvcrsl fekdkllfsl lltigimkek kqineeiwyf
     3361 lltggialdn pfpnpvsewl sekawaevvr asalpnlkgl mehleqngne wkliydsawp
     3421 haetfpgswk fldglermvi lrclrpdkmi pairefiaeh mgnvyieapt fdlqgsynds
     3481 sccaplifvl spgadpmagl lkfaddlgmg gtktqtislg qgqgpiaakm insaikdgtw
     3541 vvlqnchlat swmpalekic eevivpestn mgfrlwltsy psekfpvsil qngikmtnep
     3601 pkglranllr sylndpisdp vffqsctkav mwqkllfglc ffhaivqerr nfgplgwnip
     3661 yefnesdlri smrqiqmfln dykevpfdal tyltgecnyg grvtddkdrr lllsllstfy
     3721 cteieqdhyf lapgdtyyip phgsyqsyid ylrtlpitah pevfglhena ditkdnqetn
     3781 qlfqgvlltl prqsggsgks pqevveelaq dilsklpndf dlelvmklyp vvyeesmntv
     3841 lrqelirfnr ltevvhrsli dlgraikgqv lmsseledvf ssmlvgkvpa mwmaksypsl
     3901 kplggyvadl larlaffqdw idngppvvfw isgfyftqsf ltgvsqnyar kytipidhig
     3961 fefevttqet vmesnpedga yikglflega rwdrkkmqig esfpkilydp lpiiwlkpge
     4021 samflhqniy vcpvyktsar rgtlsttghs tnyvlsielp tdrpqkhwin rgvaslcqld
     4081 n
//
LOCUS       XP_061008951             771 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA exonuclease 5 isoform X1 [Dama dama].
ACCESSION   XP_061008951
VERSION     XP_061008951.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152968.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..771
                     /product="RNA exonuclease 5 isoform X1"
                     /calculated_mol_wt=86897
     Region          231..379
                     /region_name="REX1_like"
                     /note="DEDDh 3'-5' exonuclease domain of RNA exonuclease
                     1, -3 and similar eukaryotic proteins; cd06145"
                     /db_xref="CDD:99848"
     Site            order(234..237,239,312..313,315..317,365,370)
                     /site_type="active"
                     /db_xref="CDD:99848"
     Site            order(234..237,239,312..313,315..316,365,370)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:99848"
     Site            order(234,236,317,365,370)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:99848"
     Region          504..574
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          600..670
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..771
                     /gene="REXO5"
                     /coded_by="XM_061152968.1:144..2459"
                     /db_xref="GeneID:133063510"
ORIGIN      
        1 meperqrsgr tlkkgrkrsr ipsklvgaae amrsrwdlee kqqpvakkar lstilfaenc
       61 eithgqlcel lkyavlgkss fpkpswcqlf hqnhlnnvvv filqglsqlh fykfylefgf
      121 lrkafkhkfr lpppssdfla diiglqkkqi ignlpkameg slpsasskvs inlqkdpiiq
      181 kygskkvglt rclltkeemk tyhfplqgfp ncenfvptkc ngsvtdnspl fgldcemclt
      241 skgreltris lvaeggscvm delvkpdnki vdyltsfsgi tkkilnpvtt klkdvqrqlk
      301 mllppdavlv ghsldldlra lkmihpyvid tsllyvrghg rrfklkflak ailgkdiqcp
      361 drlghdated arttlelary flkygpkkia elnlealssh qesqeprnta elvqqlntsv
      421 lecldsvgqk llfltreada salssspncq tikclsnkev leqarveipl fpfsivqfsf
      481 epfspnltee mkkrikikwt emstvyagpf nkncnlralk rlfksfgpvr smtfvlethq
      541 phlciqyevl eaaqlaiesl ddilvegsci kvqrpvtelt ldcdtlvnel eqdsenrgti
      601 ylsgvsetfk ehlfqqsslf lgleavilpk dlksgkqkry cflrfktfss aqralsiltg
      661 kdwklkgrha ltprhlhswl rglpresrlp gvrvippple qealqmlkvd hpkiaawhwg
      721 rkigklyhnl csgtlclill pgtksthgsl sglglmgikd eeesttpntc l
//
LOCUS       XP_061008952             771 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA exonuclease 5 isoform X1 [Dama dama].
ACCESSION   XP_061008952
VERSION     XP_061008952.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152969.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..771
                     /product="RNA exonuclease 5 isoform X1"
                     /calculated_mol_wt=86897
     Region          231..379
                     /region_name="REX1_like"
                     /note="DEDDh 3'-5' exonuclease domain of RNA exonuclease
                     1, -3 and similar eukaryotic proteins; cd06145"
                     /db_xref="CDD:99848"
     Site            order(234..237,239,312..313,315..317,365,370)
                     /site_type="active"
                     /db_xref="CDD:99848"
     Site            order(234..237,239,312..313,315..316,365,370)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:99848"
     Site            order(234,236,317,365,370)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:99848"
     Region          504..574
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          600..670
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..771
                     /gene="REXO5"
                     /coded_by="XM_061152969.1:141..2456"
                     /db_xref="GeneID:133063510"
ORIGIN      
        1 meperqrsgr tlkkgrkrsr ipsklvgaae amrsrwdlee kqqpvakkar lstilfaenc
       61 eithgqlcel lkyavlgkss fpkpswcqlf hqnhlnnvvv filqglsqlh fykfylefgf
      121 lrkafkhkfr lpppssdfla diiglqkkqi ignlpkameg slpsasskvs inlqkdpiiq
      181 kygskkvglt rclltkeemk tyhfplqgfp ncenfvptkc ngsvtdnspl fgldcemclt
      241 skgreltris lvaeggscvm delvkpdnki vdyltsfsgi tkkilnpvtt klkdvqrqlk
      301 mllppdavlv ghsldldlra lkmihpyvid tsllyvrghg rrfklkflak ailgkdiqcp
      361 drlghdated arttlelary flkygpkkia elnlealssh qesqeprnta elvqqlntsv
      421 lecldsvgqk llfltreada salssspncq tikclsnkev leqarveipl fpfsivqfsf
      481 epfspnltee mkkrikikwt emstvyagpf nkncnlralk rlfksfgpvr smtfvlethq
      541 phlciqyevl eaaqlaiesl ddilvegsci kvqrpvtelt ldcdtlvnel eqdsenrgti
      601 ylsgvsetfk ehlfqqsslf lgleavilpk dlksgkqkry cflrfktfss aqralsiltg
      661 kdwklkgrha ltprhlhswl rglpresrlp gvrvippple qealqmlkvd hpkiaawhwg
      721 rkigklyhnl csgtlclill pgtksthgsl sglglmgikd eeesttpntc l
//
LOCUS       XP_061008953             723 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA exonuclease 5 isoform X2 [Dama dama].
ACCESSION   XP_061008953
VERSION     XP_061008953.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152970.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..723
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..723
                     /product="RNA exonuclease 5 isoform X2"
                     /calculated_mol_wt=81550
     Region          183..331
                     /region_name="REX1_like"
                     /note="DEDDh 3'-5' exonuclease domain of RNA exonuclease
                     1, -3 and similar eukaryotic proteins; cd06145"
                     /db_xref="CDD:99848"
     Site            order(186..189,191,264..265,267..269,317,322)
                     /site_type="active"
                     /db_xref="CDD:99848"
     Site            order(186..189,191,264..265,267..268,317,322)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:99848"
     Site            order(186,188,269,317,322)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:99848"
     Region          456..526
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          552..622
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..723
                     /gene="REXO5"
                     /coded_by="XM_061152970.1:144..2315"
                     /db_xref="GeneID:133063510"
ORIGIN      
        1 meperqrsgr tlkkgrkrsr ipsklvgaae amrsrwdlee kqqpvakkar lstilfaenc
       61 eithgqlcel lkyavlgkss fpkpswcqlf hqnhlnnvvv filqglsqlh fykfylefgf
      121 lrkafkhkfr lpppssdfla diiglqkkqi ignlpkameg fpncenfvpt kcngsvtdns
      181 plfgldcemc ltskgreltr islvaeggsc vmdelvkpdn kivdyltsfs gitkkilnpv
      241 ttklkdvqrq lkmllppdav lvghsldldl ralkmihpyv idtsllyvrg hgrrfklkfl
      301 akailgkdiq cpdrlghdat edarttlela ryflkygpkk iaelnleals shqesqeprn
      361 taelvqqlnt svlecldsvg qkllfltrea dasalssspn cqtikclsnk evleqarvei
      421 plfpfsivqf sfepfspnlt eemkkrikik wtemstvyag pfnkncnlra lkrlfksfgp
      481 vrsmtfvlet hqphlciqye vleaaqlaie slddilvegs cikvqrpvte ltldcdtlvn
      541 eleqdsenrg tiylsgvset fkehlfqqss lflgleavil pkdlksgkqk rycflrfktf
      601 ssaqralsil tgkdwklkgr haltprhlhs wlrglpresr lpgvrvippp leqealqmlk
      661 vdhpkiaawh wgrkigklyh nlcsgtlcli llpgtksthg slsglglmgi kdeeesttpn
      721 tcl
//
LOCUS       XP_061008955             686 aa            linear   MAM 02-DEC-2023
DEFINITION  ERI1 exoribonuclease 2 isoform X1 [Dama dama].
ACCESSION   XP_061008955
VERSION     XP_061008955.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152972.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..686
                     /product="ERI1 exoribonuclease 2 isoform X1"
                     /calculated_mol_wt=76925
     Region          37..230
                     /region_name="ERI-1_3'hExo_like"
                     /note="DEDDh 3'-5' exonuclease domain of Caenorhabditis
                     elegans ERI-1, human 3' exonuclease, and similar proteins;
                     cd06133"
                     /db_xref="CDD:99836"
     Site            order(41..44,46,92,152..156,160,213,218)
                     /site_type="active"
                     /db_xref="CDD:99836"
     Site            order(41..44,46,92,152..156,160,213,218)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:99836"
     Site            order(41,43,156,213,218)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:99836"
     Region          590..638
                     /region_name="zf-GRF"
                     /note="GRF zinc finger; pfam06839"
                     /db_xref="CDD:462017"
     CDS             1..686
                     /gene="ERI2"
                     /coded_by="XM_061152972.1:116..2176"
                     /db_xref="GeneID:133063511"
ORIGIN      
        1 matkrlarql glirrksipp angnlgrsks kqlfdylivl dfestcwndg khhrsqeiie
       61 fpavllntst geiesefhay vqpqehpils efcmeltgir qaqvdegvpl kiclsqfckw
      121 iqkiqqqkki ifattvsdss taevklcafv twsdwdlgvc leyeckrkql lkpvflnswi
      181 dlrvtykify rrkpkglsga lqevgmqflg rehfglddsr ntallawkmi rdgclmkitr
      241 slnkvstkrn pniftrnlnt dqvketsact nnthdpsiyg repknsiksy kkiqmksvgv
      301 nspikdqlqq kdsikaglcn vrscfslfna tkswtslgql qssswntpmq kqinqhlafn
      361 insktstvds elvpvsttis sfnnvsdmev ssaldclpml adwedvallp asqpeqniyc
      421 ippvsdsnvd tslnsgervm vleesemlsh enfggteetp qksvtsksiv yksphttiyn
      481 ikeakdpgsd tfgfklpeck ssnlnsvnsn vshplvlgkh plclddskrn psspplfppa
      541 kkqtftihee kpassndspg aisswkilps vltstvnlqe pwksgkitpp lckcgrrskr
      601 ltvsnngpnh gkvfyccpvg kyqekrkccg yfkweqtlqk eransivlsh spggltfssl
      661 etnlicdrnv nfstknslrl rpsmrn
//
LOCUS       XP_061008956             679 aa            linear   MAM 02-DEC-2023
DEFINITION  ERI1 exoribonuclease 2 isoform X2 [Dama dama].
ACCESSION   XP_061008956
VERSION     XP_061008956.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152973.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..679
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..679
                     /product="ERI1 exoribonuclease 2 isoform X2"
                     /calculated_mol_wt=76178
     Region          37..223
                     /region_name="ERI-1_3'hExo_like"
                     /note="DEDDh 3'-5' exonuclease domain of Caenorhabditis
                     elegans ERI-1, human 3' exonuclease, and similar proteins;
                     cd06133"
                     /db_xref="CDD:99836"
     Site            order(41..44,46,92,138..140,148..149,153,206,211)
                     /site_type="active"
                     /db_xref="CDD:99836"
     Site            order(41..44,46,92,138..140,148..149,153,206,211)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:99836"
     Site            order(41,43,149,206,211)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:99836"
     Region          583..631
                     /region_name="zf-GRF"
                     /note="GRF zinc finger; pfam06839"
                     /db_xref="CDD:462017"
     CDS             1..679
                     /gene="ERI2"
                     /coded_by="XM_061152973.1:116..2155"
                     /db_xref="GeneID:133063511"
ORIGIN      
        1 matkrlarql glirrksipp angnlgrsks kqlfdylivl dfestcwndg khhrsqeiie
       61 fpavllntst geiesefhay vqpqehpils efcmeltgir qaqvdegvpl kiclsqfckw
      121 iqkiqqqkki ifattvsdss taevklywdl gvcleyeckr kqllkpvfln swidlrvtyk
      181 ifyrrkpkgl sgalqevgmq flgrehfgld dsrntallaw kmirdgclmk itrslnkvst
      241 krnpniftrn lntdqvkets actnnthdps iygrepknsi ksykkiqmks vgvnspikdq
      301 lqqkdsikag lcnvrscfsl fnatkswtsl gqlqssswnt pmqkqinqhl afninsktst
      361 vdselvpvst tissfnnvsd mevssaldcl pmladwedva llpasqpeqn iycippvsds
      421 nvdtslnsge rvmvleesem lshenfggte etpqksvtsk sivyksphtt iynikeakdp
      481 gsdtfgfklp eckssnlnsv nsnvshplvl gkhplcldds krnpsspplf ppakkqtfti
      541 heekpassnd spgaisswki lpsvltstvn lqepwksgki tpplckcgrr skrltvsnng
      601 pnhgkvfycc pvgkyqekrk ccgyfkweqt lqkeransiv lshspggltf ssletnlicd
      661 rnvnfstkns lrlrpsmrn
//
LOCUS       XP_061008957             593 aa            linear   MAM 02-DEC-2023
DEFINITION  ERI1 exoribonuclease 2 isoform X3 [Dama dama].
ACCESSION   XP_061008957
VERSION     XP_061008957.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152974.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..593
                     /product="ERI1 exoribonuclease 2 isoform X3"
                     /calculated_mol_wt=66289
     Region          <2..137
                     /region_name="ERI-1_3'hExo_like"
                     /note="DEDDh 3'-5' exonuclease domain of Caenorhabditis
                     elegans ERI-1, human 3' exonuclease, and similar proteins;
                     cd06133"
                     /db_xref="CDD:99836"
     Region          497..545
                     /region_name="zf-GRF"
                     /note="GRF zinc finger; pfam06839"
                     /db_xref="CDD:462017"
     CDS             1..593
                     /gene="ERI2"
                     /coded_by="XM_061152974.1:303..2084"
                     /db_xref="GeneID:133063511"
ORIGIN      
        1 meltgirqaq vdegvplkic lsqfckwiqk iqqqkkiifa ttvsdsstae vklcafvtws
       61 dwdlgvcley eckrkqllkp vflnswidlr vtykifyrrk pkglsgalqe vgmqflgreh
      121 fglddsrnta llawkmirdg clmkitrsln kvstkrnpni ftrnlntdqv ketsactnnt
      181 hdpsiygrep knsiksykki qmksvgvnsp ikdqlqqkds ikaglcnvrs cfslfnatks
      241 wtslgqlqss swntpmqkqi nqhlafnins ktstvdselv pvsttissfn nvsdmevssa
      301 ldclpmladw edvallpasq peqniycipp vsdsnvdtsl nsgervmvle esemlshenf
      361 ggteetpqks vtsksivyks phttiynike akdpgsdtfg fklpeckssn lnsvnsnvsh
      421 plvlgkhplc lddskrnpss pplfppakkq tftiheekpa ssndspgais swkilpsvlt
      481 stvnlqepwk sgkitpplck cgrrskrltv snngpnhgkv fyccpvgkyq ekrkccgyfk
      541 weqtlqkera nsivlshspg gltfssletn licdrnvnfs tknslrlrps mrn
//
LOCUS       XP_061008958             260 aa            linear   MAM 02-DEC-2023
DEFINITION  ERI1 exoribonuclease 2 isoform X4 [Dama dama].
ACCESSION   XP_061008958
VERSION     XP_061008958.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152975.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..260
                     /product="ERI1 exoribonuclease 2 isoform X4"
                     /calculated_mol_wt=29691
     Region          37..230
                     /region_name="ERI-1_3'hExo_like"
                     /note="DEDDh 3'-5' exonuclease domain of Caenorhabditis
                     elegans ERI-1, human 3' exonuclease, and similar proteins;
                     cd06133"
                     /db_xref="CDD:99836"
     Site            order(41..44,46,92,152..156,160,213,218)
                     /site_type="active"
                     /db_xref="CDD:99836"
     Site            order(41..44,46,92,152..156,160,213,218)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:99836"
     Site            order(41,43,156,213,218)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:99836"
     CDS             1..260
                     /gene="ERI2"
                     /coded_by="XM_061152975.1:116..898"
                     /db_xref="GeneID:133063511"
ORIGIN      
        1 matkrlarql glirrksipp angnlgrsks kqlfdylivl dfestcwndg khhrsqeiie
       61 fpavllntst geiesefhay vqpqehpils efcmeltgir qaqvdegvpl kiclsqfckw
      121 iqkiqqqkki ifattvsdss taevklcafv twsdwdlgvc leyeckrkql lkpvflnswi
      181 dlrvtykify rrkpkglsga lqevgmqflg rehfglddsr ntallawkmi rdgclmkitr
      241 slnkarilel vaisysrgss
//
LOCUS       XP_061008959             252 aa            linear   MAM 02-DEC-2023
DEFINITION  ERI1 exoribonuclease 2 isoform X5 [Dama dama].
ACCESSION   XP_061008959
VERSION     XP_061008959.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152976.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..252
                     /product="ERI1 exoribonuclease 2 isoform X5"
                     /calculated_mol_wt=28873
     Region          37..230
                     /region_name="ERI-1_3'hExo_like"
                     /note="DEDDh 3'-5' exonuclease domain of Caenorhabditis
                     elegans ERI-1, human 3' exonuclease, and similar proteins;
                     cd06133"
                     /db_xref="CDD:99836"
     Site            order(41..44,46,92,152..156,160,213,218)
                     /site_type="active"
                     /db_xref="CDD:99836"
     Site            order(41..44,46,92,152..156,160,213,218)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:99836"
     Site            order(41,43,156,213,218)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:99836"
     CDS             1..252
                     /gene="ERI2"
                     /coded_by="XM_061152976.1:116..874"
                     /db_xref="GeneID:133063511"
ORIGIN      
        1 matkrlarql glirrksipp angnlgrsks kqlfdylivl dfestcwndg khhrsqeiie
       61 fpavllntst geiesefhay vqpqehpils efcmeltgir qaqvdegvpl kiclsqfckw
      121 iqkiqqqkki ifattvsdss taevklcafv twsdwdlgvc leyeckrkql lkpvflnswi
      181 dlrvtykify rrkpkglsga lqevgmqflg rehfglddsr ntallawkmi rdgclmkitr
      241 slnkvwlsla cl
//
LOCUS       XP_061008960             581 aa            linear   MAM 02-DEC-2023
DEFINITION  acyl-coenzyme A synthetase ACSM3, mitochondrial [Dama dama].
ACCESSION   XP_061008960
VERSION     XP_061008960.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152977.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..581
                     /product="acyl-coenzyme A synthetase ACSM3, mitochondrial"
                     /calculated_mol_wt=65680
     Region          48..578
                     /region_name="MACS_euk"
                     /note="Eukaryotic Medium-chain acyl-CoA synthetase (MACS
                     or ACSM); cd05928"
                     /db_xref="CDD:341251"
     Site            order(147,274..276,300,320,322,326,347..350,369..374,
                     377..378,393,456,468,471,477,479..482,511,542,547..548,
                     550,552)
                     /site_type="active"
                     /db_xref="CDD:341251"
     Site            order(226,229..234,236..237)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341251"
     Site            order(270,322..323,326,347,479..481,542,548)
                     /site_type="other"
                     /note="putative CoA binding site [chemical binding]"
                     /db_xref="CDD:341251"
     Site            order(347..350,369..374,393,456,468,471,477,482)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341251"
     CDS             1..581
                     /gene="ACSM3"
                     /coded_by="XM_061152977.1:228..1973"
                     /db_xref="GeneID:133063512"
ORIGIN      
        1 mkillcakyf qclaipgsmr alhkdyrtvt pqnfsnyesm kqdfkleipe yfnfakdvld
       61 qwtnvekagk rpsnpafwwi ngngeevrws feelgslsrk fanilteacg lqrgdrvivl
      121 lpripewwla iiaclrtgtv lipgttqmtq kdilyrlqss kakciitnev lapavdavas
      181 kcenlhskli vsqspregwe nlkemmkhas dnhtcvktkh nemmaiffts gtsgypkmtg
      241 hthssfglgl singrfwldl tpldvmwnts dtgwaksaws svyspwiqga cvfahylpqf
      301 eptsilqtls kfpitvfcsa ptayrmlvqn dkarnykfks lkhcvtagep inpevteqwr
      361 nrtgldiyeg ygqtetvlvc gnfkgmkikp gsmgkpspaf dvkildvngn vlppgkegdi
      421 girvqpnrpv glfthyidnp tktastlrgn fyitgdrgym dedgyfwfvs raddiilssg
      481 yrigpfeves aliehpavae savvsspdpi rgevvkafiv lnpdykshdq eqlkkeiqeh
      541 vkrntapyky prkvefiqel pktisgkikr nelrkkewet t
//
LOCUS       XP_061008961             177 aa            linear   MAM 02-DEC-2023
DEFINITION  lipid droplet assembly factor 1 isoform X1 [Dama dama].
ACCESSION   XP_061008961
VERSION     XP_061008961.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152978.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..177
                     /product="lipid droplet assembly factor 1 isoform X1"
                     /calculated_mol_wt=19140
     Region          57..144
                     /region_name="Promethin"
                     /note="pfam16015"
                     /db_xref="CDD:464974"
     CDS             1..177
                     /gene="LDAF1"
                     /coded_by="XM_061152978.1:201..734"
                     /db_xref="GeneID:133063513"
ORIGIN      
        1 makeeppsts kdlrelqrkl slliasvqsn skapdleevk kkldflrtvv sfmkspvgqy
       61 ldrhpfltlt llvflavsav pvgfflllvv ltslaafvgv illeglvisv gglsllcvlc
      121 glgfvslvis gtimvsymvv sslinywfsl rllpqhnssg dcplamksah veglyqe
//
LOCUS       XP_061008963             161 aa            linear   MAM 02-DEC-2023
DEFINITION  lipid droplet assembly factor 1 isoform X2 [Dama dama].
ACCESSION   XP_061008963
VERSION     XP_061008963.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152980.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..161
                     /product="lipid droplet assembly factor 1 isoform X2"
                     /calculated_mol_wt=17256
     Region          18..128
                     /region_name="Promethin"
                     /note="pfam16015"
                     /db_xref="CDD:464974"
     CDS             1..161
                     /gene="LDAF1"
                     /coded_by="XM_061152980.1:201..686"
                     /db_xref="GeneID:133063513"
ORIGIN      
        1 makeeppsts kdlrelqrkl slliasvqsn skvvsfmksp vgqyldrhpf ltltllvfla
       61 vsavpvgffl llvvltslaa fvgvillegl visvgglsll cvlcglgfvs lvisgtimvs
      121 ymvvssliny wfslrllpqh nssgdcplam ksahveglyq e
//
LOCUS       XP_061008964             156 aa            linear   MAM 02-DEC-2023
DEFINITION  LYR motif-containing protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061008964
VERSION     XP_061008964.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152981.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..156
                     /product="LYR motif-containing protein 1 isoform X1"
                     /calculated_mol_wt=17904
     Region          42..117
                     /region_name="Complex1_LYR_LYRM1"
                     /note="LYR (leucine-tyrosine-arginine) motif found in LYR
                     motif-containing protein 1 (LYRM1) and similar proteins;
                     cd20261"
                     /db_xref="CDD:380756"
     CDS             1..156
                     /gene="LYRM1"
                     /coded_by="XM_061152981.1:372..842"
                     /db_xref="GeneID:133063514"
ORIGIN      
        1 mgfsrqeyws glpvpspgdl pdpgieprsp alqkmtmatr qevlglyrri frlarkwqaa
       61 sgqmedtike kqyilneart lfqknknltd tdlikqcide ctarieiglh yqipyprpih
      121 lppmgltplr grglrsqekl rkfskpiylk shdevs
//
LOCUS       XP_061008965             122 aa            linear   MAM 02-DEC-2023
DEFINITION  LYR motif-containing protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061008965
VERSION     XP_061008965.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152982.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..122
                     /product="LYR motif-containing protein 1 isoform X2"
                     /calculated_mol_wt=14212
     Region          8..83
                     /region_name="Complex1_LYR_LYRM1"
                     /note="LYR (leucine-tyrosine-arginine) motif found in LYR
                     motif-containing protein 1 (LYRM1) and similar proteins;
                     cd20261"
                     /db_xref="CDD:380756"
     CDS             1..122
                     /gene="LYRM1"
                     /coded_by="XM_061152982.1:268..636"
                     /db_xref="GeneID:133063514"
ORIGIN      
        1 mtmatrqevl glyrrifrla rkwqaasgqm edtikekqyi lneartlfqk nknltdtdli
       61 kqcidectar ieiglhyqip yprpihlppm gltplrgrgl rsqeklrkfs kpiylkshde
      121 vs
//
LOCUS       XP_061008966             122 aa            linear   MAM 02-DEC-2023
DEFINITION  LYR motif-containing protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061008966
VERSION     XP_061008966.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152983.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..122
                     /product="LYR motif-containing protein 1 isoform X2"
                     /calculated_mol_wt=14212
     Region          8..83
                     /region_name="Complex1_LYR_LYRM1"
                     /note="LYR (leucine-tyrosine-arginine) motif found in LYR
                     motif-containing protein 1 (LYRM1) and similar proteins;
                     cd20261"
                     /db_xref="CDD:380756"
     CDS             1..122
                     /gene="LYRM1"
                     /coded_by="XM_061152983.1:273..641"
                     /db_xref="GeneID:133063514"
ORIGIN      
        1 mtmatrqevl glyrrifrla rkwqaasgqm edtikekqyi lneartlfqk nknltdtdli
       61 kqcidectar ieiglhyqip yprpihlppm gltplrgrgl rsqeklrkfs kpiylkshde
      121 vs
//
LOCUS       XP_061008967             122 aa            linear   MAM 02-DEC-2023
DEFINITION  LYR motif-containing protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061008967
VERSION     XP_061008967.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152984.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..122
                     /product="LYR motif-containing protein 1 isoform X2"
                     /calculated_mol_wt=14212
     Region          8..83
                     /region_name="Complex1_LYR_LYRM1"
                     /note="LYR (leucine-tyrosine-arginine) motif found in LYR
                     motif-containing protein 1 (LYRM1) and similar proteins;
                     cd20261"
                     /db_xref="CDD:380756"
     CDS             1..122
                     /gene="LYRM1"
                     /coded_by="XM_061152984.1:1870..2238"
                     /db_xref="GeneID:133063514"
ORIGIN      
        1 mtmatrqevl glyrrifrla rkwqaasgqm edtikekqyi lneartlfqk nknltdtdli
       61 kqcidectar ieiglhyqip yprpihlppm gltplrgrgl rsqeklrkfs kpiylkshde
      121 vs
//
LOCUS       XP_061008968             122 aa            linear   MAM 02-DEC-2023
DEFINITION  LYR motif-containing protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061008968
VERSION     XP_061008968.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152985.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..122
                     /product="LYR motif-containing protein 1 isoform X2"
                     /calculated_mol_wt=14212
     Region          8..83
                     /region_name="Complex1_LYR_LYRM1"
                     /note="LYR (leucine-tyrosine-arginine) motif found in LYR
                     motif-containing protein 1 (LYRM1) and similar proteins;
                     cd20261"
                     /db_xref="CDD:380756"
     CDS             1..122
                     /gene="LYRM1"
                     /coded_by="XM_061152985.1:22..390"
                     /db_xref="GeneID:133063514"
ORIGIN      
        1 mtmatrqevl glyrrifrla rkwqaasgqm edtikekqyi lneartlfqk nknltdtdli
       61 kqcidectar ieiglhyqip yprpihlppm gltplrgrgl rsqeklrkfs kpiylkshde
      121 vs
//
LOCUS       XP_061008969             304 aa            linear   MAM 02-DEC-2023
DEFINITION  DCN1-like protein 3 [Dama dama].
ACCESSION   XP_061008969
VERSION     XP_061008969.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152986.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..304
                     /product="DCN1-like protein 3"
                     /calculated_mol_wt=34143
     Region          164..276
                     /region_name="Cullin_binding"
                     /note="Cullin binding; pfam03556"
                     /db_xref="CDD:460971"
     CDS             1..304
                     /gene="DCUN1D3"
                     /coded_by="XM_061152986.1:280..1194"
                     /db_xref="GeneID:133063515"
ORIGIN      
        1 mgqcvtkckn psstlgskng drdpsskshg rrsashreeq lpacgkpggd ilvngtkkae
       61 aapeacqlpt ssgdagrepk snaeesslqr leelfrrykd eredaileeg merfcndlcv
      121 dptefrvlll awkfqaatmc kftrkeffdg ckaisadsid gicarfpsll teakqedkfk
      181 dlyrftfqfg ldseegqrsl hreiaialwk lvftqnnppv ldqwlnflte npsgikgisr
      241 dtwnmflnft qvigpdlsny sedeawpslf dtfvewemer rkregegrga lssgpeglcp
      301 eeqt
//
LOCUS       XP_061008970             727 aa            linear   MAM 02-DEC-2023
DEFINITION  zona pellucida sperm-binding protein 2 [Dama dama].
ACCESSION   XP_061008970
VERSION     XP_061008970.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152987.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..727
                     /product="zona pellucida sperm-binding protein 2"
                     /calculated_mol_wt=81344
     Region          381..643
                     /region_name="Zona_pellucida"
                     /note="Zona pellucida-like domain; pfam00100"
                     /db_xref="CDD:459673"
     CDS             1..727
                     /gene="ZP2"
                     /coded_by="XM_061152987.1:1616..3799"
                     /db_xref="GeneID:133063516"
ORIGIN      
        1 mpfclvdwvv ssvmacrqrg dsrrpsswfh adwrsfflff alltsvnsid vnqlvdpafp
       61 gtvtcyedrm vvefkrtlgn kiqhasvvds lglkmlncty vldpekltlk apyesctkrv
      121 lgqhqmtitf mndnaafrqg nvlyhvscpl mqagrheqhs gsticskdfm sftfhffpgm
      181 addtegprpe mgwtitvgdg eraqnltlpe altqgynili enqkmsiqvl fhatgvtrys
      241 qgnshlymvp lklthvspgq tiilssrlic vsdpvtcnat hmtltipefp gklksmsfen
      301 kniavnqlhn sgivmeiang lrlhfsktll ktkfsekclp yqfylsslkl tfytqletvs
      361 mviypecvce stvsivsgel ctqdgfmdve vyrhqtkpal nldtirvgds scqptftapf
      421 qglvkfhipl ngcgtrhkfe ndkviyenei halwadlpps tisrdsefrm tvrcyysssn
      481 mlintnvesl pppvasvkpg plaltlqtyp dnsylrpygd kdypvvrylr qpiylevrvl
      541 nrtdpniklv lddcwatstk dpaslpqwni ivdgceynld nhrttfhpvg ssvtypnhyq
      601 rfdvktfafv seapvfphlv yfhcsalicn qlssnlplcs asclvssrsr ratgateeek
      661 mivslpgpil llsdgssfrd avgskghgtp gyvafktmva vvalagvvat lslisylrkk
      721 ritmlnh
//
LOCUS       XP_061008971             412 aa            linear   MAM 02-DEC-2023
DEFINITION  ankyrin repeat and SAM domain-containing protein 4B [Dama dama].
ACCESSION   XP_061008971
VERSION     XP_061008971.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152988.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..412
                     /product="ankyrin repeat and SAM domain-containing protein
                     4B"
                     /calculated_mol_wt=46202
     Region          <1..>117
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          3..29
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(6..7,10..12,14..15,19,22,29,31,33,37..38,41..43,
                     45..46,50,53,62,64,66,70..71,74..76,78..79,83,86,95)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          31..62
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          64..95
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          97..128
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          255..>281
                     /region_name="CEN_USH1G_ANKS4B"
                     /note="central domain found in usher syndrome type-1G
                     protein, ankyrin repeat and SAM domain-containing protein
                     4B, and similar proteins; cl41746"
                     /db_xref="CDD:425377"
     Site            order(264..265,268..269,271..276)
                     /site_type="other"
                     /note="myosin tail binding site [polypeptide binding]"
                     /db_xref="CDD:409641"
     Region          340..405
                     /region_name="SAM_HARP"
                     /note="SAM domain of HARP subfamily; cd09587"
                     /db_xref="CDD:188986"
     Site            order(340,342,344..346,348..349,351,396..397,401)
                     /site_type="other"
                     /note="putative polypeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:188986"
     CDS             1..412
                     /gene="ANKS4B"
                     /coded_by="XM_061152988.1:67..1305"
                     /db_xref="GeneID:133063517"
ORIGIN      
        1 mstryhqaas dsylellkea tkrdlnlsde dgmtptllaa yhgnlealei icsrggdpnk
       61 cdiwgntplh yaasnghahc vsflinfgan ifaldndlqs pldaaasrer necvalldka
      121 atsqnimnpk kvtrqkeqaq knvkkqikec erlqekhqnk martyskees gtlssskgtf
      181 srsplsnasa sntfgslskg ikdtlklkfk knkdtaeqlg ngsrsgqknv mevfredeed
      241 efsgdfiekl qlsaegdscm qhesilnrpg lgnvvfgrnr ifspedisds rrelgftmps
      301 ellqrqgeae adeegeennh eddlpwdede vdweedvvda tplevflqsh yleeflpifm
      361 reqidleall lcsdedlqsi qmqlgprkkv lnainrrkqv lqqpgqlvdt nl
//
LOCUS       XP_061008972             314 aa            linear   MAM 02-DEC-2023
DEFINITION  ketimine reductase mu-crystallin [Dama dama].
ACCESSION   XP_061008972
VERSION     XP_061008972.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152989.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..314
                     /product="ketimine reductase mu-crystallin"
                     /calculated_mol_wt=33514
     Region          5..313
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     CDS             1..314
                     /gene="CRYM"
                     /coded_by="XM_061152989.1:1021..1965"
                     /db_xref="GeneID:133063519"
ORIGIN      
        1 mssrpvflsa advqdhlrss slliapleta lanfssgpdg gvvqpvrtvv pvakhsgflg
       61 vmpaysaaed alttklvtfy eghsntsavp shqatvllfq pnngsllavm dgnvitakrt
      121 aavsaiatkf lkppnsevlc ilgagvqays hyeifteqff fkevriwnrt kenaekfvns
      181 vpgevrvcss vqeavtgadv iitvtmatep ilfgewvkpg ahinaigasr pdwrelddel
      241 mkqavlyvds qeaalkesgd vllsgaeifa elgevvkgvk pahcekttvf kslgmavedm
      301 vaaklvydsw ssgk
//
LOCUS       XP_061008973             453 aa            linear   MAM 02-DEC-2023
DEFINITION  cytochrome b-c1 complex subunit 2, mitochondrial [Dama dama].
ACCESSION   XP_061008973
VERSION     XP_061008973.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152990.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..453
                     /product="cytochrome b-c1 complex subunit 2,
                     mitochondrial"
                     /calculated_mol_wt=47944
     Region          31..437
                     /region_name="PqqL"
                     /note="Predicted Zn-dependent peptidase, M16 family
                     [General function prediction only]; COG0612"
                     /db_xref="CDD:440377"
     CDS             1..453
                     /gene="LOC133063520"
                     /coded_by="XM_061152990.1:125..1486"
                     /db_xref="GeneID:133063520"
ORIGIN      
        1 mklltragpl srfyslkvap kakaaaapag vplhpqdlef trlpnglvia slenyapasr
       61 iglfikagsr yensnnlgts hllrlasslt tkgassfkit rgieavggkl svtstrenma
      121 ytveclrddv dilmefllnv ttapefrrwe vaalqsqlri dkavafqnpq ahiienlhat
      181 ayrnalansl ycpdyrigkv tpdelhdfvq nhftsarmal iglgvshpvl kqvaeqflni
      241 rgglglsgak akyhggeire qngdslvhaa lvaesaaigs aeanafsvlq hvlgagphvk
      301 rgsnatscly qavakgvhqp fdvsafnasy sdsglfgfyt isqaasagdv ikaaynqvkt
      361 iaqgnlsnad vqaaknklka gylmsvesse gfldevgsqa laagsytpps tvlqqidava
      421 dadvinaakk fvsgqksmaa sgnlghtpfi ddl
//
LOCUS       XP_061008974             263 aa            linear   MAM 02-DEC-2023
DEFINITION  PDZ domain-containing protein 9 [Dama dama].
ACCESSION   XP_061008974
VERSION     XP_061008974.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152991.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..263
                     /product="PDZ domain-containing protein 9"
                     /calculated_mol_wt=29583
     Region          28..109
                     /region_name="PDZ_canonical"
                     /note="canonical PDZ domain; cl49608"
                     /db_xref="CDD:483948"
     Site            order(39..45,54,57,87,91,94..95)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467153"
     CDS             1..263
                     /gene="PDZD9"
                     /coded_by="XM_061152991.1:84..875"
                     /db_xref="GeneID:133063521"
ORIGIN      
        1 mkksvpknvk gkqvnlkvkp svhdlsktlq tkltvgslgl gliiiqhgpy lqithlitkg
       61 aaardgtlqp gdvlisvgya nvlgytlref lkllqhitig tilqikvyrd fidipqewqe
      121 iydlipetkf pitrttkkte eakdgsvtss dddeafdtrl kyykyprstg hypvrrpmsi
      181 srewhgykkk nhvmrvgkdi ncdvmihrdh kkevrapspy wtmvkqdnei sssssassts
      241 dafwledctp vekgsgepvs rvg
//
LOCUS       XP_061008975             167 aa            linear   MAM 02-DEC-2023
DEFINITION  modulator of smoothened protein [Dama dama].
ACCESSION   XP_061008975
VERSION     XP_061008975.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152992.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..167
                     /product="modulator of smoothened protein"
                     /calculated_mol_wt=18119
     Region          25..166
                     /region_name="Atthog"
                     /note="Attenuator of Hedgehog; pfam18800"
                     /db_xref="CDD:436747"
     CDS             1..167
                     /gene="MOSMO"
                     /coded_by="XM_061152992.1:10..513"
                     /db_xref="GeneID:133063522"
ORIGIN      
        1 mdkltiisgc lflaadifai asianpdwin tgesagaltv glvrqcqtih grdrtcippr
       61 lppewvttlf fiimgiislt vtcgllvash wrreatkyar wiaftgmilf cmaalifpig
      121 fyinevggqp yklpnntvvg ssyvlfvlsi fftivgllfa gkvclpg
//
LOCUS       XP_061008976             723 aa            linear   MAM 02-DEC-2023
DEFINITION  eukaryotic elongation factor 2 kinase isoform X1 [Dama dama].
ACCESSION   XP_061008976
VERSION     XP_061008976.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152993.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..723
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..723
                     /product="eukaryotic elongation factor 2 kinase isoform
                     X1"
                     /calculated_mol_wt=81564
     Region          101..316
                     /region_name="Alpha_kinase_eEF2K"
                     /note="Alpha-kinase domain of eukaryotic elongation
                     factor-2 kinase; cd16967"
                     /db_xref="CDD:341217"
     Site            order(137..142,144,166,168,208,227..230,272,274,282)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:341217"
     Region          <530..693
                     /region_name="TPR"
                     /note="TPR repeat [General function prediction only];
                     COG0790"
                     /db_xref="CDD:440553"
     Region          541..574
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     Region          591..620
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     CDS             1..723
                     /gene="EEF2K"
                     /coded_by="XM_061152993.1:227..2398"
                     /db_xref="GeneID:133063523"
ORIGIN      
        1 maeedlifrl egvdgspasr agdsdtdsdd deegyficsi tddpgahqnv nfkvnnchsn
       61 lakserygss gspagsfhfk eawkhaieka khmpdpwaef hledvateca trhrynavtg
      121 ewvedevlik masqpfgrga mrecfrtkkl snflhtqqwk gasnyvakry iesvdrdvyf
      181 edvrlqmeak lwgeeynrhk ppkqvdimqm cvielkerpg rplfhlehyi egkyikynsn
      241 sgfvrddnvr ltpqafshft fersghqliv vdiqgvgdly tdpqihterg tdfgdgnlgv
      301 rgmalffhsh acnricksmg lapfdlspre rdavnqntkl lqsaktilrg teekcgsprv
      361 rtlsgsrppl llrlsensgd dnmsdvtfds lpsspssatp hsqkldhlhw pvfsdldnma
      421 prdqdpldnh rdsensgdsg ypsekrgdld dpepkehghs ngnrryesde dslgssgrvc
      481 vekwnlfnss rlhlprpsav alevqrlnal dlekkigksi lgkvhlamvr yheagrfcek
      541 deewdresav fhlehaadlg eleaivglgl mysqlphhil advslketee nktkgfdyll
      601 kaaeagdrqc milvarafdt gqnlspdrsq swpealhwyn talettdcde ggeydgmqde
      661 prymllarea emlftggcgl ekdpqrsgdl ytqaaeaame amkgrlanqy yekaeeawaq
      721 mee
//
LOCUS       XP_061008977             722 aa            linear   MAM 02-DEC-2023
DEFINITION  eukaryotic elongation factor 2 kinase isoform X2 [Dama dama].
ACCESSION   XP_061008977
VERSION     XP_061008977.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152994.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..722
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..722
                     /product="eukaryotic elongation factor 2 kinase isoform
                     X2"
                     /calculated_mol_wt=81436
     Region          101..316
                     /region_name="Alpha_kinase_eEF2K"
                     /note="Alpha-kinase domain of eukaryotic elongation
                     factor-2 kinase; cd16967"
                     /db_xref="CDD:341217"
     Site            order(137..142,144,166,168,208,227..230,272,274,282)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:341217"
     Region          <529..692
                     /region_name="TPR"
                     /note="TPR repeat [General function prediction only];
                     COG0790"
                     /db_xref="CDD:440553"
     Region          540..573
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     Region          590..619
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     CDS             1..722
                     /gene="EEF2K"
                     /coded_by="XM_061152994.1:227..2395"
                     /db_xref="GeneID:133063523"
ORIGIN      
        1 maeedlifrl egvdgspasr agdsdtdsdd deegyficsi tddpgahqnv nfkvnnchsn
       61 lakserygss gspagsfhfk eawkhaieka khmpdpwaef hledvateca trhrynavtg
      121 ewvedevlik masqpfgrga mrecfrtkkl snflhtqqwk gasnyvakry iesvdrdvyf
      181 edvrlqmeak lwgeeynrhk ppkqvdimqm cvielkerpg rplfhlehyi egkyikynsn
      241 sgfvrddnvr ltpqafshft fersghqliv vdiqgvgdly tdpqihterg tdfgdgnlgv
      301 rgmalffhsh acnricksmg lapfdlspre rdavnqntkl lsaktilrgt eekcgsprvr
      361 tlsgsrppll lrlsensgdd nmsdvtfdsl psspssatph sqkldhlhwp vfsdldnmap
      421 rdqdpldnhr dsensgdsgy psekrgdldd pepkehghsn gnrryesded slgssgrvcv
      481 ekwnlfnssr lhlprpsava levqrlnald lekkigksil gkvhlamvry heagrfcekd
      541 eewdresavf hlehaadlge leaivglglm ysqlphhila dvslketeen ktkgfdyllk
      601 aaeagdrqcm ilvarafdtg qnlspdrsqs wpealhwynt alettdcdeg geydgmqdep
      661 rymllareae mlftggcgle kdpqrsgdly tqaaeaamea mkgrlanqyy ekaeeawaqm
      721 ee
//
LOCUS       XP_061008978             711 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Dama
            dama].
ACCESSION   XP_061008978
VERSION     XP_061008978.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152995.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..711
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..711
                     /product="DNA-directed RNA polymerase III subunit RPC5
                     isoform X1"
                     /calculated_mol_wt=79896
     Region          5..432
                     /region_name="RPC5"
                     /note="RPC5 protein; pfam04801"
                     /db_xref="CDD:461434"
     Region          443..711
                     /region_name="RPC5_C"
                     /note="DNA-directed RNA polymerase III subunit RPC5
                     C-terminal; pfam19725"
                     /db_xref="CDD:466161"
     CDS             1..711
                     /gene="POLR3E"
                     /coded_by="XM_061152995.1:183..2318"
                     /db_xref="GeneID:133063524"
ORIGIN      
        1 maneeddpvv qeidvylaks laeklylfqy pvrpasmtyd diphlsakik pkqqkvelem
       61 aidtlnpnyc rskgeqialn vdgacadets tyssklmdkq tfcssqttsn tsryaaalyr
      121 qgelhltplh gilqlrpsfs yldkadakhr ereaaneagd ssqdeaeedv kqitvrfsrp
      181 eseqarqrrv qsyeflqkkh aeepwvhlhy yglrdsrseh erqyllcqgs sgventelvk
      241 spseylmmlm ppsqeeekdk pvapsnvlsm aqlrtlplad qikilmknvk vmpfanlmsl
      301 lgpsvdsvav lrgiqkvaml vqgnwvvksd ilypkdsssp hsgvpaevlc rgrdfvmwkf
      361 tqsrwvvrke vaavtklcte dvkdflehma vvrinkgwef ilpydgefik khpdvvqrqh
      421 mlwtgiqakl ekvynlvkea mpkkldgqsg pvglvsgdqr vqvakrqaqq nhallerelq
      481 rrkeqlqasa vlpgvrikee pmseegedee erevedeeep mdtspggglh sglanglpag
      541 raaggdsfng hppsgsagnp varelrafvq atfqkqfvlt lselkrlfnl hlaslppghm
      601 lfsgisdrml qdtvlaagck qilvpfppqt aaspdeqkvf alwesgdisd qhrqvlleif
      661 sknyrvrrnm iqarltqecg edlskqevdk vlkdccvsyg gmwylkgtvq s
//
LOCUS       XP_061008979             710 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA-directed RNA polymerase III subunit RPC5 isoform X2 [Dama
            dama].
ACCESSION   XP_061008979
VERSION     XP_061008979.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152996.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..710
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..710
                     /product="DNA-directed RNA polymerase III subunit RPC5
                     isoform X2"
                     /calculated_mol_wt=79825
     Region          5..431
                     /region_name="RPC5"
                     /note="RPC5 protein; pfam04801"
                     /db_xref="CDD:461434"
     Region          442..710
                     /region_name="RPC5_C"
                     /note="DNA-directed RNA polymerase III subunit RPC5
                     C-terminal; pfam19725"
                     /db_xref="CDD:466161"
     CDS             1..710
                     /gene="POLR3E"
                     /coded_by="XM_061152996.1:183..2315"
                     /db_xref="GeneID:133063524"
ORIGIN      
        1 maneeddpvv qeidvylaks laeklylfqy pvrpasmtyd diphlsakik pkqqkvelem
       61 aidtlnpnyc rskgeqialn vdgacadets tyssklmdkq tfcssqttsn tsryaaalyr
      121 qgelhltplh gilqlrpsfs yldkadakhr ereaanegds sqdeaeedvk qitvrfsrpe
      181 seqarqrrvq syeflqkkha eepwvhlhyy glrdsrsehe rqyllcqgss gventelvks
      241 pseylmmlmp psqeeekdkp vapsnvlsma qlrtlpladq ikilmknvkv mpfanlmsll
      301 gpsvdsvavl rgiqkvamlv qgnwvvksdi lypkdsssph sgvpaevlcr grdfvmwkft
      361 qsrwvvrkev aavtklcted vkdflehmav vrinkgwefi lpydgefikk hpdvvqrqhm
      421 lwtgiqakle kvynlvkeam pkkldgqsgp vglvsgdqrv qvakrqaqqn hallerelqr
      481 rkeqlqasav lpgvrikeep mseegedeee revedeeepm dtspggglhs glanglpagr
      541 aaggdsfngh ppsgsagnpv arelrafvqa tfqkqfvltl selkrlfnlh laslppghml
      601 fsgisdrmlq dtvlaagckq ilvpfppqta aspdeqkvfa lwesgdisdq hrqvlleifs
      661 knyrvrrnmi qarltqecge dlskqevdkv lkdccvsygg mwylkgtvqs
//
LOCUS       XP_061008980             675 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA-directed RNA polymerase III subunit RPC5 isoform X3 [Dama
            dama].
ACCESSION   XP_061008980
VERSION     XP_061008980.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152997.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..675
                     /product="DNA-directed RNA polymerase III subunit RPC5
                     isoform X3"
                     /calculated_mol_wt=75772
     Region          1..396
                     /region_name="RPC5"
                     /note="RPC5 protein; pfam04801"
                     /db_xref="CDD:461434"
     Region          407..675
                     /region_name="RPC5_C"
                     /note="DNA-directed RNA polymerase III subunit RPC5
                     C-terminal; pfam19725"
                     /db_xref="CDD:466161"
     CDS             1..675
                     /gene="POLR3E"
                     /coded_by="XM_061152997.1:152..2179"
                     /db_xref="GeneID:133063524"
ORIGIN      
        1 mtyddiphls akikpkqqkv elemaidtln pnycrskgeq ialnvdgaca detstysskl
       61 mdkqtfcssq ttsntsryaa alyrqgelhl tplhgilqlr psfsyldkad akhrereaan
      121 eagdssqdea eedvkqitvr fsrpeseqar qrrvqsyefl qkkhaeepwv hlhyyglrds
      181 rseherqyll cqgssgvent elvkspseyl mmlmppsqee ekdkpvapsn vlsmaqlrtl
      241 pladqikilm knvkvmpfan lmsllgpsvd svavlrgiqk vamlvqgnwv vksdilypkd
      301 sssphsgvpa evlcrgrdfv mwkftqsrwv vrkevaavtk lctedvkdfl ehmavvrink
      361 gwefilpydg efikkhpdvv qrqhmlwtgi qaklekvynl vkeampkkld gqsgpvglvs
      421 gdqrvqvakr qaqqnhalle relqrrkeql qasavlpgvr ikeepmseeg edeeereved
      481 eeepmdtspg gglhsglang lpagraaggd sfnghppsgs agnpvarelr afvqatfqkq
      541 fvltlselkr lfnlhlaslp pghmlfsgis drmlqdtvla agckqilvpf ppqtaaspde
      601 qkvfalwesg disdqhrqvl leifsknyrv rrnmiqarlt qecgedlskq evdkvlkdcc
      661 vsyggmwylk gtvqs
//
LOCUS       XP_061008981             456 aa            linear   MAM 02-DEC-2023
DEFINITION  cerebellar degeneration-related protein 2 [Dama dama].
ACCESSION   XP_061008981
VERSION     XP_061008981.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152998.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..456
                     /product="cerebellar degeneration-related protein 2"
                     /calculated_mol_wt=51819
     Region          <8..>263
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..456
                     /gene="CDR2"
                     /coded_by="XM_061152998.1:103..1473"
                     /db_xref="GeneID:133063525"
ORIGIN      
        1 mlaenlveef emkedepwyd hqdlqqdlql aaelgktlld rnteledslq qmyttnqeql
       61 qeieyltkqv ellrqmneqh akvyeqldvt areleetnqk lvadskasqq kilsltetie
      121 clqmnvdhlq sqveelksss qrrrsqgrhd qeesapsvss lkelydlrqh fvydhvfaek
      181 itslpsqqsp deeenehlkk tvtmlqaqls lerqkrvtve eeyglvlken seleqqlgat
      241 dayraralel eaevaemrqm lraehpfvng veklvpdslf vpfkepgqsl ldemlltvpe
      301 alrkplkrss setvlsslag sdlvrgheet cirraravrq rgvsllhevd tqygalkaky
      361 eellgrcqra egglahkavq tsrapakdpa apsaqpepgp rswgpasvsp epvsspttst
      421 ppeyralfke ifscikktkq eideqrskyr slsshs
//
LOCUS       XP_061008982             318 aa            linear   MAM 02-DEC-2023
DEFINITION  protein-L-histidine N-pros-methyltransferase isoform X1 [Dama
            dama].
ACCESSION   XP_061008982
VERSION     XP_061008982.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061152999.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..318
                     /product="protein-L-histidine N-pros-methyltransferase
                     isoform X1"
                     /calculated_mol_wt=36405
     Region          56..317
                     /region_name="DREV"
                     /note="DREV methyltransferase; pfam05219"
                     /db_xref="CDD:253097"
     Site            order(152..158,174..175,193,208)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
     CDS             1..318
                     /gene="METTL9"
                     /coded_by="XM_061152999.1:153..1109"
                     /db_xref="GeneID:133063526"
ORIGIN      
        1 mrllagwlcl slasvwlarr mwtlrspltr slyvnmtsgp ggpaaaaggr kenhqwyvcn
       61 reklceslqa vfvqsyldqg tqiflnnsie ksgwlfiqly hsfvssvfsl fmsrtsingl
      121 lgrgsmfvfs pdqfqrllki npdwkthrll dlgagdgevt kimsphfeei yatelsetmi
      181 wqlqkkkyrv lginewqktg fqydviscln lldrcdqplt llkdirsvle ptrgrvilal
      241 vlpfhpyven vggkwdkpse ileikgqnwe eqvnslpevf rkagfvieaf trlpylcegd
      301 myndyyvldd avfvlkpv
//
LOCUS       XP_061008983             317 aa            linear   MAM 02-DEC-2023
DEFINITION  protein-L-histidine N-pros-methyltransferase isoform X2 [Dama
            dama].
ACCESSION   XP_061008983
VERSION     XP_061008983.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153000.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..317
                     /product="protein-L-histidine N-pros-methyltransferase
                     isoform X2"
                     /calculated_mol_wt=36306
     Region          56..316
                     /region_name="DREV"
                     /note="DREV methyltransferase; pfam05219"
                     /db_xref="CDD:253097"
     Site            order(152..158,174..175,193,208)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
     CDS             1..317
                     /gene="METTL9"
                     /coded_by="XM_061153000.1:208..1161"
                     /db_xref="GeneID:133063526"
ORIGIN      
        1 mrllagwlcl slasvwlarr mwtlrspltr slyvnmtsgp ggpaaaaggr kenhqwyvcn
       61 reklceslqa vfvqsyldqg tqiflnnsie ksgwlfiqly hsfvssvfsl fmsrtsingl
      121 lgrgsmfvfs pdqfqrllki npdwkthrll dlgagdgevt kimsphfeei yatelsetmi
      181 wqlqkkkyrv lginewqktg fqydviscln lldrcdqplt llkdirsvle ptrgrvilal
      241 vlpfhpyven ggkwdkpsei leikgqnwee qvnslpevfr kagfvieaft rlpylcegdm
      301 yndyyvldda vfvlkpv
//
LOCUS       XP_061008984             238 aa            linear   MAM 02-DEC-2023
DEFINITION  immunoglobulin superfamily member 6 [Dama dama].
ACCESSION   XP_061008984
VERSION     XP_061008984.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153001.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..238
                     /product="immunoglobulin superfamily member 6"
                     /calculated_mol_wt=26808
     Region          47..117
                     /region_name="IGv"
                     /note="Immunoglobulin V-Type; smart00406"
                     /db_xref="CDD:214650"
     Region          47..51
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          100..104
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          114..122
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          133..136
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..238
                     /gene="IGSF6"
                     /coded_by="XM_061153001.1:2436..3152"
                     /db_xref="GeneID:133063527"
ORIGIN      
        1 metvnrgkii lglelnlilf yvgvaddctv svsqlpelev dyrqkvvtlt csfstvgcpa
       61 ekptrlwfry gthepenlcs ngcssetdky tlkypaqnqv sltvnrltfn dsaiyicgia
      121 frsskqprak qtgggtvlvv retkvlskel qsvliallvl fsiyiisvlv ilivltelks
      181 ntqrkketee sqkkksarri fqeiaqelyn krhaetsqpt ekdntyenrt alsnyerp
//
LOCUS       XP_061008985             367 aa            linear   MAM 02-DEC-2023
DEFINITION  heparan sulfate glucosamine 3-O-sulfotransferase 2 [Dama dama].
ACCESSION   XP_061008985
VERSION     XP_061008985.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153002.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..367
                     /product="heparan sulfate glucosamine 3-O-sulfotransferase
                     2"
                     /calculated_mol_wt=41129
     Region          114..351
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; pfam00685"
                     /db_xref="CDD:425820"
     CDS             1..367
                     /gene="HS3ST2"
                     /coded_by="XM_061153002.1:53..1156"
                     /db_xref="GeneID:133063528"
ORIGIN      
        1 mayrvlgrag ppqprrarrl lfaftlslsc tylcysllcc cddlgqsrll gaprclrgpg
       61 aggqkllqes rpcdpsgpap gepgapsapa agapsprlsg snhsgspklg tkrlpqaliv
      121 gvkkggtrav lefirvhpdv ralgtephff drnygrgldw yrslmprtle sqitlektps
      181 yfvtqeaprr ifnmsrdtkl ivvvrnpvtr aisdytqtls kkpdiptfeg lsfrnrtlgl
      241 vdvswnairi gmyalhlesw lryfplaqih fvsgerlitd pagemgrvqd flgikrlitd
      301 khfyfnktkg fpclkktess llprclgksk grthvqidpe vidqlrefyr pynikfyetv
      361 gqdfrwe
//
LOCUS       XP_061008986            1369 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin carboxyl-terminal hydrolase 31 isoform X1 [Dama dama].
ACCESSION   XP_061008986
VERSION     XP_061008986.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153003.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1369
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1369
                     /product="ubiquitin carboxyl-terminal hydrolase 31 isoform
                     X1"
                     /calculated_mol_wt=148361
     Region          <123..784
                     /region_name="UBP12"
                     /note="Ubiquitin C-terminal hydrolase [Posttranslational
                     modification, protein turnover, chaperones]; COG5560"
                     /db_xref="CDD:227847"
     Region          981..>1231
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..1369
                     /gene="USP31"
                     /coded_by="XM_061153003.1:1..4110"
                     /db_xref="GeneID:133063530"
ORIGIN      
        1 msqvtapgpg ppaaaaggke krsfskrlfr sgraggsgga ggpgpaapss pssarsvgsf
       61 msrvlktlst lshlssegaa pdrgglrscf ppgpaaaptp pppcppppas pappacaaep
      121 vpgvaglrnh gntcfmnatl qclsntelfa eylalgqyra grpepspdpe qpagrgaqgq
      181 gevteqlahl vralwtleyt pqhsrdfksi vsknalqyrg nsqhdaqefl lwlldrvhed
      241 lnhavkqggq pplkppsetd mmpegpsfpv cstfvqelfq aqyrssltcp hcqkqsntfd
      301 pflcislpip lphtrplyvt vvyqgkcshc mrvgvavpls gtvarlreav svetkiptdq
      361 ivltemyydg fhrsfcdtdd letvhesdci fafetpeifr pegilsqrgi hlnnnlnhlk
      421 fgldhyrlss ptqaaakqgk adlppsrags dkivllvcnr actgqqgrrf glpfvlhlek
      481 tiawdllqke ilekmkyflr ptvciqvcpf slrvvsvvgi tyllpqeeqp lchptveral
      541 kscgpggtah vklvvewdke tkdflfvnte deyipdaesv rlqrerhhqp qtctlsqcfq
      601 lytkeerlap ddawrcphck qlqqgsitls lwtlpdvlii hlkrfrqegd krmklqnmvk
      661 fpltgldmtp hvvkrsqssw slpshwspwr rpyglgrdpe dyiydlyavc nhhgtmqggh
      721 ytghnisetc wkrktisasv fresfcknsv dglwycfdds dvqqlsedev ctqtayilfy
      781 qrrtaipsws anssvagsts sslcehwvsr lpgskqasvt saassrrtsl aslsesvemt
      841 gerseddggf strpfvrsvq rqslssrpsv tsplavnesc irpswslsak lqmrssspsr
      901 fsgdspihts astlekigea vddkvsiscf gslrnlsssh qdssdshsrr ehkavgrapl
      961 avmegvfrde sdsrklnssv adaqsrssah gdhlppvsdp fdnnnqiayv dqsdsvdssp
     1021 vkevkppshp gslakkpest tkrapstrgt peperslrkg rpalasqess lsstspsspv
     1081 pvkvsgkpsr srskadsssr asgrhsspap apkkesspks hesvsspslq kqksasslay
     1141 tasstsakka sgpaprgpfp pgksrtsdrs lsregsrhsl vsdrasvtss skpnsprvsq
     1201 aragdgradg khvrsssmas lrspsmsvka glkrdsksed kglsffksal rqketrrstd
     1261 lgkttllskk pgggsvksvc kstvddkaek gsqvpgtqqp nasavgkepl askdpasakh
     1321 sllsarkskt sqldsmapss pgcrqsaeks skklpssmqt sarpsqkpq
//
LOCUS       XP_061008987            1348 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin carboxyl-terminal hydrolase 31 isoform X2 [Dama dama].
ACCESSION   XP_061008987
VERSION     XP_061008987.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153004.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1348
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1348
                     /product="ubiquitin carboxyl-terminal hydrolase 31 isoform
                     X2"
                     /calculated_mol_wt=145914
     Region          <123..763
                     /region_name="UBP12"
                     /note="Ubiquitin C-terminal hydrolase [Posttranslational
                     modification, protein turnover, chaperones]; COG5560"
                     /db_xref="CDD:227847"
     Region          960..>1210
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..1348
                     /gene="USP31"
                     /coded_by="XM_061153004.1:1..4047"
                     /db_xref="GeneID:133063530"
ORIGIN      
        1 msqvtapgpg ppaaaaggke krsfskrlfr sgraggsgga ggpgpaapss pssarsvgsf
       61 msrvlktlst lshlssegaa pdrgglrscf ppgpaaaptp pppcppppas pappacaaep
      121 vpgvaglrnh gntcfmnatl qclsntelfa eylalgqyra grpepspdpe qpagrgaqgq
      181 gevteqlahl vralwtleyt pqhsrdfksi vsknalqyrg nsqhdaqefl lwlldrvhed
      241 lnhavkqggq pplkppsetd mmpegpsfpv cstfvqelfq aqyrssltcp hcqkqsntfd
      301 pflcislpip lphtrplyvt vvyqgkcshc mrvgvavpls gtvarlreav svetkiptdq
      361 ivltemyydg fhrsfcdtdd letvhesdci fafetpeifr pegilsqrgi hlnnnlnhlk
      421 fgldhyrlss ptqaaakqgk adlppsrags dkivllvcnr actgqqgrrf glpfvlhlek
      481 tiawdllqke ilekmkyflr ptvciqvcpf slrvvsvvgi tyllpqeeqp lchptveral
      541 kscgpggtah vklvvewdke tkdflfvnte deyipdaesv rlqrerhhqp qtctlsqcfq
      601 lytkeerlap ddawrcphck qlqqgsitls lwtlpdvlii hlkrfrqegd krmklqnmvk
      661 fpltgldmtp hvvkrsqssw slpshwspwr rpyglgrdpe dyiydlyavc nhhgtmqggh
      721 ytafcknsvd glwycfddsd vqqlsedevc tqtayilfyq rrtaipswsa nssvagstss
      781 slcehwvsrl pgskqasvts aassrrtsla slsesvemtg erseddggfs trpfvrsvqr
      841 qslssrpsvt splavnesci rpswslsakl qmrssspsrf sgdspihtsa stlekigeav
      901 ddkvsiscfg slrnlssshq dssdshsrre hkavgrapla vmegvfrdes dsrklnssva
      961 daqsrssahg dhlppvsdpf dnnnqiayvd qsdsvdsspv kevkppshpg slakkpestt
     1021 krapstrgtp eperslrkgr palasqessl sstspsspvp vkvsgkpsrs rskadsssra
     1081 sgrhsspapa pkkesspksh esvsspslqk qksasslayt asstsakkas gpaprgpfpp
     1141 gksrtsdrsl sregsrhslv sdrasvtsss kpnsprvsqa ragdgradgk hvrsssmasl
     1201 rspsmsvkag lkrdsksedk glsffksalr qketrrstdl gkttllskkp gggsvksvck
     1261 stvddkaekg sqvpgtqqpn asavgkepla skdpasakhs llsarkskts qldsmapssp
     1321 gcrqsaekss kklpssmqts arpsqkpq
//
LOCUS       XP_061008988             770 aa            linear   MAM 02-DEC-2023
DEFINITION  conserved oligomeric Golgi complex subunit 7 [Dama dama].
ACCESSION   XP_061008988
VERSION     XP_061008988.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153005.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..770
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..770
                     /product="conserved oligomeric Golgi complex subunit 7"
                     /calculated_mol_wt=86363
     Region          2..766
                     /region_name="COG7"
                     /note="Golgi complex component 7 (COG7); pfam10191"
                     /db_xref="CDD:431125"
     CDS             1..770
                     /gene="COG7"
                     /coded_by="XM_061153005.1:182..2494"
                     /db_xref="GeneID:133063531"
ORIGIN      
        1 mdfskflaed fdvkewinaa fragpkeaaa gkadshaatl vmklqlfiqe vnhaveetsh
       61 qalqnmpkvl rdvealkqea sflkeqmilv kedikkfeqd tsqsmqvlve idqvksrmql
      121 aaeslqeadk wstlsadiee tfktqdiavi sakltgmqns lmmlvdtpdy sekcvhleal
      181 knrlealasp qivaaftsqs idqskmfvkv fseidrmpql layyykchkv qllaawqelc
      241 qsdlpldrql tglydallga whaqiqwasq vfknphdvvt vlliqtlgal vpslpvslss
      301 gveragpele lvkllefyda tahfakglem allpyaheqn lvkvmelvda vygpykpyql
      361 kygdmeekyl liqfsevple hgevidcvqe lshsvnklfg lssaavdrci rftnglgtcg
      421 lltalkslfa kyvsdftstl hsirkkyrld diplnslfqe dwtafqnsir iiatcgellr
      481 qcgdfeqqla nrilstagky lsdsfsprsl tgfqdsiltd kkssaknpwq eynylqkdsp
      541 aeygslmeil ytlkekgssn hhllsasrsa ltrlnqqahq lafdsvflri kqqlllipkm
      601 dswntagige tltddlptfs ltpleyisni gqyimslpln lepfvtqeds alelalhagk
      661 lpfppeqgde lpeldnmadn wlgsiaratm qtycdailqi peltphstkq latdidylin
      721 vmdalglqps rtlqnivmll kakpedyrqv skglprrlat tvaamrsvdy
//
LOCUS       XP_061008990             616 aa            linear   MAM 02-DEC-2023
DEFINITION  ADP-ribosylation factor-binding protein GGA2 [Dama dama].
ACCESSION   XP_061008990
VERSION     XP_061008990.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153007.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..616
                     /product="ADP-ribosylation factor-binding protein GGA2"
                     /calculated_mol_wt=67023
     Region          30..167
                     /region_name="VHS_GGA2"
                     /note="VHS (Vps27/Hrs/STAM) domain of ADP-ribosylation
                     factor-binding protein GGA2; cd17010"
                     /db_xref="CDD:340807"
     Site            order(31,35,40,69..70,72..74,76..79,113,126)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:340807"
     Site            order(47..48,51,55,95..96)
                     /site_type="other"
                     /note="putative intraprotein/interprotein binding site
                     [polypeptide binding]"
                     /db_xref="CDD:340807"
     Site            order(107..109,112,121..122,151,158,162)
                     /site_type="other"
                     /note="acidic-cluster-dileucine motif interaction site
                     [polypeptide binding]"
                     /db_xref="CDD:340807"
     Region          189..228
                     /region_name="GGA_N-GAT"
                     /note="N-terminal extension of GAT domain; pfam18308"
                     /db_xref="CDD:465702"
     Region          231..318
                     /region_name="GAT_GGA1_GGA2"
                     /note="canonical GAT domain found in ADP-ribosylation
                     factor (Arf)-binding proteins GGA1 and GGA2; cd14239"
                     /db_xref="CDD:410586"
     Site            order(241,244..245,248,251..252,255,264..265,267..268,
                     271..272,275)
                     /site_type="other"
                     /note="putative ubiquitin binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410586"
     Site            order(277,280..281,283..285,287..288,290,292,294,301,
                     304..305,308)
                     /site_type="other"
                     /note="Rabaptin5 binding site [polypeptide binding]"
                     /db_xref="CDD:410586"
     Region          396..>582
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          494..608
                     /region_name="Alpha_adaptinC2"
                     /note="Adaptin C-terminal domain; smart00809"
                     /db_xref="CDD:197886"
     CDS             1..616
                     /gene="GGA2"
                     /coded_by="XM_061153007.1:16..1866"
                     /db_xref="GeneID:133063533"
ORIGIN      
        1 matatavaag agaaagaesa egprgptpal elwlnkatdp smseqdwsai qnfcdqvntd
       61 pngsthapwl lahkiqspqe kealyaltvl etcvnhcgek fhnevakfrf lnelikvlsp
      121 kylgswttek vkgriieilf swtvwfpedi kirdayqmlk kqgiikqdpk lpvdkilppp
      181 spwpkssifd adeekskllt rllksnhped lqaanrlikn lvkeeqekse kvskrvsave
      241 evrshvkvlq emlstyrrpg qappdqaalq vvyerceklr ptlfrlasdt tdddealaei
      301 lqandlltqg vllykqvmeg rvtfgntvas svgdipvsrv fqnptgcmkn cplidledsg
      361 peqagtvaps llhqdlaalg isdapvtskv agqnccqekt dpassalpag gaqspsaern
      421 lldllspqpp pgslnyipqk sipkevppgt ksspgwswea gplapspssq ntplaqvfvp
      481 lesvkpsslp plivydrngf rillhfsqtg apghpelqvl lltmmstatq pvwdimfqva
      541 vpksmrvklq passsklpaf spltppavis qmllldnphk epirlryklt fnqggqpfse
      601 vgevkdfpdl avlgaa
//
LOCUS       XP_061008991             523 aa            linear   MAM 02-DEC-2023
DEFINITION  probable glutamate--tRNA ligase, mitochondrial isoform X1 [Dama
            dama].
ACCESSION   XP_061008991
VERSION     XP_061008991.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153008.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..523
                     /product="probable glutamate--tRNA ligase, mitochondrial
                     isoform X1"
                     /calculated_mol_wt=57843
     Region          37..521
                     /region_name="GlnS"
                     /note="Glutamyl- or glutaminyl-tRNA synthetase
                     [Translation, ribosomal structure and biogenesis];
                     COG0008"
                     /db_xref="CDD:439779"
     CDS             1..523
                     /gene="EARS2"
                     /coded_by="XM_061153008.1:29..1600"
                     /db_xref="GeneID:133063534"
ORIGIN      
        1 mavllkrllh pgrspaalgr lmgrreaslg adpgaavrvr fapsptgflh lgglrtalyn
       61 yifakkhqgs filrledtdq trlvpgaaen iedmlewagv ppdesprrgg pagpylqsqr
      121 lvlysqaaea llksgaaypc fcspqrlell kkealrnrqt prydnrcrsl sqaqvaqkla
      181 tdpkpairfr legeapafqd lvygwnrhev asvegdpvil ksdgfptyhl acvvddhhmg
      241 ishvlrgsew lvstakhlll yqalgwqpph fahlplllnr dgsklskrqg diflehfaat
      301 gflpdalldi itncgsgfae nqmgrtlpel itqfdlsrvt chsalldlek lpefnrlhlh
      361 rlvgdetqrc qlvgqlqalv eeafgsqlqd revldpayve riillrqghi crlqdlvspa
      421 ysylwtrpav graqlgaise kvdiiarrvl gllegpgtnl tqdmlngelk klsdglegik
      481 hsnvmkllrv alsgqqqgpp vaemmvslgp kevreriqkv lcs
//
LOCUS       XP_061008992             492 aa            linear   MAM 02-DEC-2023
DEFINITION  probable glutamate--tRNA ligase, mitochondrial isoform X2 [Dama
            dama].
ACCESSION   XP_061008992
VERSION     XP_061008992.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153009.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..492
                     /product="probable glutamate--tRNA ligase, mitochondrial
                     isoform X2"
                     /calculated_mol_wt=54939
     Region          16..490
                     /region_name="GlnS"
                     /note="Glutamyl- or glutaminyl-tRNA synthetase
                     [Translation, ribosomal structure and biogenesis];
                     COG0008"
                     /db_xref="CDD:439779"
     CDS             1..492
                     /gene="EARS2"
                     /coded_by="XM_061153009.1:72..1550"
                     /db_xref="GeneID:133063534"
ORIGIN      
        1 micsktwvff hfqdegflhl gglrtalyny ifakkhqgsf ilrledtdqt rlvpgaaeni
       61 edmlewagvp pdesprrggp agpylqsqrl vlysqaaeal lksgaaypcf cspqrlellk
      121 kealrnrqtp rydnrcrsls qaqvaqklat dpkpairfrl egeapafqdl vygwnrheva
      181 svegdpvilk sdgfptyhla cvvddhhmgi shvlrgsewl vstakhllly qalgwqpphf
      241 ahlplllnrd gsklskrqgd iflehfaatg flpdalldii tncgsgfaen qmgrtlpeli
      301 tqfdlsrvtc hsalldlekl pefnrlhlhr lvgdetqrcq lvgqlqalve eafgsqlqdr
      361 evldpayver iillrqghic rlqdlvspay sylwtrpavg raqlgaisek vdiiarrvlg
      421 llegpgtnlt qdmlngelkk lsdglegikh snvmkllrva lsgqqqgppv aemmvslgpk
      481 evreriqkvl cs
//
LOCUS       XP_061008993             430 aa            linear   MAM 02-DEC-2023
DEFINITION  probable glutamate--tRNA ligase, mitochondrial isoform X3 [Dama
            dama].
ACCESSION   XP_061008993
VERSION     XP_061008993.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153010.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..430
                     /product="probable glutamate--tRNA ligase, mitochondrial
                     isoform X3"
                     /calculated_mol_wt=47767
     Region          2..428
                     /region_name="GlnS"
                     /note="Glutamyl- or glutaminyl-tRNA synthetase
                     [Translation, ribosomal structure and biogenesis];
                     COG0008"
                     /db_xref="CDD:439779"
     CDS             1..430
                     /gene="EARS2"
                     /coded_by="XM_061153010.1:331..1623"
                     /db_xref="GeneID:133063534"
ORIGIN      
        1 mlewagvppd esprrggpag pylqsqrlvl ysqaaeallk sgaaypcfcs pqrlellkke
       61 alrnrqtpry dnrcrslsqa qvaqklatdp kpairfrleg eapafqdlvy gwnrhevasv
      121 egdpvilksd gfptyhlacv vddhhmgish vlrgsewlvs takhlllyqa lgwqpphfah
      181 lplllnrdgs klskrqgdif lehfaatgfl pdalldiitn cgsgfaenqm grtlpelitq
      241 fdlsrvtchs alldleklpe fnrlhlhrlv gdetqrcqlv gqlqalveea fgsqlqdrev
      301 ldpayverii llrqghicrl qdlvspaysy lwtrpavgra qlgaisekvd iiarrvlgll
      361 egpgtnltqd mlngelkkls dglegikhsn vmkllrvals gqqqgppvae mmvslgpkev
      421 reriqkvlcs
//
LOCUS       XP_061008994            1186 aa            linear   MAM 02-DEC-2023
DEFINITION  partner and localizer of BRCA2 isoform X1 [Dama dama].
ACCESSION   XP_061008994
VERSION     XP_061008994.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153011.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1186
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1186
                     /product="partner and localizer of BRCA2 isoform X1"
                     /calculated_mol_wt=130713
     Region          838..1185
                     /region_name="PALB2_WD40"
                     /note="Partner and localizer of BRCA2 WD40 domain;
                     pfam16756"
                     /db_xref="CDD:435563"
     CDS             1..1186
                     /gene="PALB2"
                     /coded_by="XM_061153011.1:164..3724"
                     /db_xref="GeneID:133063535"
ORIGIN      
        1 meeppgktls ceekeklkek laflkreytk tlarlqraqr aekfknsirr tveeqdsslq
       61 qevstqltht epknivsprd tlqinihvde etgektpssl diepgsfssg rvsvegsriq
      121 gsdynqehfp frvngpdakk rqskllgrrk keertcisqe resvsdtdsl ilsgkrlkeq
      181 eeinrenpri pvtelrtypl sspksaipns papvtetnvg svlilpstkp qrdvdallrg
      241 ndfpkvttlp lptlsdsssg qrlehkhpks nckltthslr nissaspvnl evekkkmtvs
      301 tdnpevnkag rtssqaarsp nleadnshfi neltcdnlve nenrnlkeqn htemslksps
      361 dalggrnesl lekevlsqsk nlslevispv stedqihsct vlegllfpae yyvrttrrms
      421 scqrkvalda viqshlgvrk kgcknkrtes akklnvsnek tkqseikvsg tqaeqpssrs
      481 pqkllsltev ssstgstedd fsrktvtkps grkcrgkrks actspldhhe lllptsgtsg
      541 vnkskkeial hkdqnekavi hskkrvkgke ghcqregsls csdyayfsse ddafsapfhr
      601 semlslkhls sflkitdfql pdedfgslkl eklkscsekl mepsgskvhg eghlkgesyi
      661 vveepspkqs niekedveee liilpgkahs kmqsqrsqpr rkdlsssill ftplntvasd
      721 dndrltadlc spafpilgat pafgsqahre kvsaevvgqt cspphlshfk atvslassrk
      781 qcdswssppk ldsgqhvagr aghpscdpgs gpqattlpte sltyeasqlq esprhsaeqt
      841 eiaevpawds lnpgtlqlvs klknpsgscs vdvsatwwei agfkepcivt aceyvvslwk
      901 pldawqweki yswhftevpv lqivvvpdvc nlvcvalgnl eireiralfc spdgksekqv
      961 llssgnikav lglakrrlvs ssgtlcdqqv eittfgedgg skekqllmpp eetiltfaev
     1021 qgmqeallgt timnniviwn lktgqllkkm hiddsyqasv chkaysemgl lfvvlshpca
     1081 kenellgspv fqlivinpkt alsmgvmlyc lphgqagrfl egdvkdhfaa avltsgtiav
     1141 wdlllghcta llppvsgqnw sfvkwsgtds hllagqkdgn ifvyry
//
LOCUS       XP_061008995            1132 aa            linear   MAM 02-DEC-2023
DEFINITION  partner and localizer of BRCA2 isoform X2 [Dama dama].
ACCESSION   XP_061008995
VERSION     XP_061008995.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153012.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1132
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1132
                     /product="partner and localizer of BRCA2 isoform X2"
                     /calculated_mol_wt=124449
     Region          838..1131
                     /region_name="PALB2_WD40"
                     /note="Partner and localizer of BRCA2 WD40 domain;
                     pfam16756"
                     /db_xref="CDD:435563"
     CDS             1..1132
                     /gene="PALB2"
                     /coded_by="XM_061153012.1:164..3562"
                     /db_xref="GeneID:133063535"
ORIGIN      
        1 meeppgktls ceekeklkek laflkreytk tlarlqraqr aekfknsirr tveeqdsslq
       61 qevstqltht epknivsprd tlqinihvde etgektpssl diepgsfssg rvsvegsriq
      121 gsdynqehfp frvngpdakk rqskllgrrk keertcisqe resvsdtdsl ilsgkrlkeq
      181 eeinrenpri pvtelrtypl sspksaipns papvtetnvg svlilpstkp qrdvdallrg
      241 ndfpkvttlp lptlsdsssg qrlehkhpks nckltthslr nissaspvnl evekkkmtvs
      301 tdnpevnkag rtssqaarsp nleadnshfi neltcdnlve nenrnlkeqn htemslksps
      361 dalggrnesl lekevlsqsk nlslevispv stedqihsct vlegllfpae yyvrttrrms
      421 scqrkvalda viqshlgvrk kgcknkrtes akklnvsnek tkqseikvsg tqaeqpssrs
      481 pqkllsltev ssstgstedd fsrktvtkps grkcrgkrks actspldhhe lllptsgtsg
      541 vnkskkeial hkdqnekavi hskkrvkgke ghcqregsls csdyayfsse ddafsapfhr
      601 semlslkhls sflkitdfql pdedfgslkl eklkscsekl mepsgskvhg eghlkgesyi
      661 vveepspkqs niekedveee liilpgkahs kmqsqrsqpr rkdlsssill ftplntvasd
      721 dndrltadlc spafpilgat pafgsqahre kvsaevvgqt cspphlshfk atvslassrk
      781 qcdswssppk ldsgqhvagr aghpscdpgs gpqattlpte sltyeasqlq esprhsaeqt
      841 eiaevpawds lnpgtlqlvs klkvpvlqiv vvpdvcnlvc valgnleire iralfcspdg
      901 ksekqvllss gnikavlgla krrlvsssgt lcdqqveitt fgedggskek qllmppeeti
      961 ltfaevqgmq eallgttimn niviwnlktg qllkkmhidd syqasvchka ysemgllfvv
     1021 lshpcakene llgspvfqli vinpktalsm gvmlyclphg qagrflegdv kdhfaaavlt
     1081 sgtiavwdll lghctallpp vsgqnwsfvk wsgtdshlla gqkdgnifvy ry
//
LOCUS       XP_061008996             309 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin domain-containing protein UBFD1 [Dama dama].
ACCESSION   XP_061008996
VERSION     XP_061008996.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153013.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..309
                     /product="ubiquitin domain-containing protein UBFD1"
                     /calculated_mol_wt=33271
     Region          86..155
                     /region_name="Ubl_UBFD1"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin
                     domain-containing protein UBFD1 and similar proteins;
                     cd17047"
                     /db_xref="CDD:340567"
     CDS             1..309
                     /gene="UBFD1"
                     /coded_by="XM_061153013.1:221..1150"
                     /db_xref="GeneID:133063536"
ORIGIN      
        1 maaagapdgm eepgmdmeae tvateapars lncveaeaaa gaaaedssaa rgslqpapaq
       61 ppgdpaaqas vsngedaggg agrelvdlki iwnktkhdvk fpldstgsel kqkihsitgl
      121 ppamqkvmyk glvpedktlr eikvtsgaki mvvgstindv lavntpkdaa qqdakaeenk
      181 keplcrqkqh rkvldkgkpe dvmpsvkgaq erlpavplsg mynksggkvr ltfkleqdql
      241 wigtkertek lpmgsiknvv sepieghedy hmmafqlgpt easyywvywv ptqyvdaikd
      301 tvlgkwqyf
//
LOCUS       XP_061008997             156 aa            linear   MAM 02-DEC-2023
DEFINITION  acyl carrier protein, mitochondrial [Dama dama].
ACCESSION   XP_061008997
VERSION     XP_061008997.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153014.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..156
                     /product="acyl carrier protein, mitochondrial"
                     /calculated_mol_wt=17318
     Region          <66..152
                     /region_name="PP-binding"
                     /note="Phosphopantetheine attachment site; cl09936"
                     /db_xref="CDD:447865"
     CDS             1..156
                     /gene="NDUFAB1"
                     /coded_by="XM_061153014.1:38..508"
                     /db_xref="GeneID:133063537"
ORIGIN      
        1 maarvlcacv rrlptaftpl prlptlaaar plsttlfaae trkrpgaplp afvlaqvpgr
       61 vtqpcrqysd appltlegik drvlyvlkly dkidpeklsv nshfmkdlgl dsldqveiim
      121 amedefgfei pdidaeklmc pqeivdyiad kkdvye
//
LOCUS       XP_061008999             182 aa            linear   MAM 02-DEC-2023
DEFINITION  dynactin subunit 5 isoform X1 [Dama dama].
ACCESSION   XP_061008999
VERSION     XP_061008999.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153016.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..182
                     /product="dynactin subunit 5 isoform X1"
                     /calculated_mol_wt=20009
     Region          13..173
                     /region_name="LbH_Dynactin_5"
                     /note="Dynactin 5 (or subunit p25); Dynactin is a major
                     component of the activator complex that stimulates
                     dynein-mediated vesicle transport. Dynactin is a
                     heterocomplex of at least eight subunits, including a
                     150,000-MW protein called Glued, the actin-capping...;
                     cd03359"
                     /db_xref="CDD:100049"
     CDS             1..182
                     /gene="DCTN5"
                     /coded_by="XM_061153016.1:108..656"
                     /db_xref="GeneID:133063539"
ORIGIN      
        1 melgellynk seyietasgn kvsrqsvlcg sqnivlngkt ivmndciirg dlanvrvgrh
       61 cvvksrsvir ppfkkfskgv affplhigdh vfieedcvvn aaqigsyvhv gkncvigrrc
      121 vlkdcckild ntvlppetvv ppftifsgcp glfsgelpec tqelmidvtk syyqkflplt
      181 qv
//
LOCUS       XP_061009000             159 aa            linear   MAM 02-DEC-2023
DEFINITION  dynactin subunit 5 isoform X2 [Dama dama].
ACCESSION   XP_061009000
VERSION     XP_061009000.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153017.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..159
                     /product="dynactin subunit 5 isoform X2"
                     /calculated_mol_wt=17668
     Region          17..150
                     /region_name="LbH_Dynactin_5"
                     /note="Dynactin 5 (or subunit p25); Dynactin is a major
                     component of the activator complex that stimulates
                     dynein-mediated vesicle transport. Dynactin is a
                     heterocomplex of at least eight subunits, including a
                     150,000-MW protein called Glued, the actin-capping...;
                     cd03359"
                     /db_xref="CDD:100049"
     CDS             1..159
                     /gene="DCTN5"
                     /coded_by="XM_061153017.1:102..581"
                     /db_xref="GeneID:133063539"
ORIGIN      
        1 melgellynk seyiettivm ndciirgdla nvrvgrhcvv ksrsvirppf kkfskgvaff
       61 plhigdhvfi eedcvvnaaq igsyvhvgkn cvigrrcvlk dcckildntv lppetvvppf
      121 tifsgcpglf sgelpectqe lmidvtksyy qkflpltqv
//
LOCUS       XP_061009001             976 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase/endoribonuclease IRE2 isoform X1
            [Dama dama].
ACCESSION   XP_061009001
VERSION     XP_061009001.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153018.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..976
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..976
                     /product="serine/threonine-protein kinase/endoribonuclease
                     IRE2 isoform X1"
                     /calculated_mol_wt=107213
     Region          35..363
                     /region_name="Luminal_IRE1"
                     /note="The Luminal domain, a dimerization domain, of the
                     Serine/Threonine protein kinase, Inositol-requiring
                     protein 1; cd09769"
                     /db_xref="CDD:188875"
     Site            order(111..115,121,123..126,128..130,142,144..146,
                     157..158,166,168,183,185..187)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:188875"
     Region          542..832
                     /region_name="STKc_IRE1"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Inositol-requiring protein 1; cd13982"
                     /db_xref="CDD:270884"
     Site            order(542,565..566,568,591..592,594,596,601..605,617,648,
                     651..652,655..656,705,823,826)
                     /site_type="other"
                     /note="dimer interface (back-to-back) [polypeptide
                     binding]"
                     /db_xref="CDD:270884"
     Site            order(548,562,722..723,752,796..798,821)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:270884"
     Site            order(551..555,560,571,573,600,616..619,622,624,687,689,
                     691..692,694,710,713,732..735)
                     /site_type="active"
                     /db_xref="CDD:270884"
     Site            order(551..555,558,560,571,573,600,616..617,619,622,
                     691..692,694,710)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270884"
     Site            order(553,556..557,559,574,576,608,610..611,778..779,
                     781..782,785)
                     /site_type="other"
                     /note="dimer interface (face-to-face) [polypeptide
                     binding]"
                     /db_xref="CDD:270884"
     Site            order(555,622,624,687,689,691,713,732..735)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270884"
     Site            order(709..724,728..735)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270884"
     Region          835..960
                     /region_name="RNase_Ire1"
                     /note="RNase domain (also known as the kinase extension
                     nuclease domain) of Ire1; cd10422"
                     /db_xref="CDD:199217"
     Site            order(835..836,839,843,907,925,955,958..959)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:199217"
     Site            order(837,933,937,940..941,945)
                     /site_type="other"
                     /note="kinase interface [polypeptide binding]"
                     /db_xref="CDD:199217"
     Site            order(839,843,846..847,904,907..908,911,924..926,954..955,
                     958)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:199217"
     CDS             1..976
                     /gene="ERN2"
                     /coded_by="XM_061153018.1:56..2986"
                     /db_xref="GeneID:133063540"
ORIGIN      
        1 masaargsgp wpplllqlaa llgtlrpqvq sftpenllfv stldgslhal skqtgdlkwt
       61 lkddpiiqgp myvtetvfls dpadgslyil gtqkqqglmr lpftipelvh aspcrssdgv
      121 fytgrkqdaw fvvdpesgkt qmtltterps tprlyigrtq ytvtmhdprt palrwnttfr
      181 rysappvdgs pgkymsylas cgmgllltvd pgsgavlwtq dlgvpvvgiy twhqenlrql
      241 phltlardtl hflalrwghi rlpasgpqdt athfsaldtq llmtlyvgkd eagfyvskal
      301 vhtgvalvpr gltlaptdgp tteevtlqvs geregspsta vrypsgsval psqwllighh
      361 epppllhttm lrvhpapgsg asgarpsesi qaptlflell slsreetpnl elhpekktse
      421 lypglgpqdl laasltalll ggwilflmss sswqrssstr ppwhlqallt slrilspspp
      481 tppfrarrgf rvpqskashw ktlkvdtiim lilwkrklka erfmtlppqt hkateqltvv
      541 gkisfnpkdv lgrgasgtfv frgqfegrav avkrllrecf slvrrevqll qesdrhpnvl
      601 ryfctergpq fhyialelcr aslreyvehp epdgwglepg talqqlmagl ahlhslhigt
      661 gasrppsepl paslssqlcs altvhrdlkp gnvliagpds qglgrvvlsd fglckklpag
      721 rcsfslrsgi pgtegwmape llqvpppdsp tsavdifsag cvfyyvlsgg shpfgeslyr
      781 qanilagapr lahleeeahd kvvarslvea mlsplpqarp aarqvlahpf fwsrakqlqf
      841 fqdvsdwlek epeqgplvta leaggsevvr sdwhkhisvp lqtdlrrfrs ykgtsvrdll
      901 ravrnkkhhy relpeevrqt lgavpdsfvq yftnrfprll lhthsamrsc aseslflpyy
      961 ppatgvggps pgaags
//
LOCUS       XP_061009002             951 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase/endoribonuclease IRE2 isoform X2
            [Dama dama].
ACCESSION   XP_061009002
VERSION     XP_061009002.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153019.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..951
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..951
                     /product="serine/threonine-protein kinase/endoribonuclease
                     IRE2 isoform X2"
                     /calculated_mol_wt=104804
     Region          35..363
                     /region_name="Luminal_IRE1"
                     /note="The Luminal domain, a dimerization domain, of the
                     Serine/Threonine protein kinase, Inositol-requiring
                     protein 1; cd09769"
                     /db_xref="CDD:188875"
     Site            order(111..115,121,123..126,128..130,142,144..146,
                     157..158,166,168,183,185..187)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:188875"
     Region          542..807
                     /region_name="STKc_IRE1"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Inositol-requiring protein 1; cd13982"
                     /db_xref="CDD:270884"
     Site            order(542,565..566,568,591..592,594,596,601..605,617,648,
                     651..652,655..656,680,798,801)
                     /site_type="other"
                     /note="dimer interface (back-to-back) [polypeptide
                     binding]"
                     /db_xref="CDD:270884"
     Site            order(548,562,697..698,727,771..773,796)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:270884"
     Site            order(551..555,560,571,573,600,616..619,622,624,662,664,
                     666..667,669,685,688,707..710)
                     /site_type="active"
                     /db_xref="CDD:270884"
     Site            order(551..555,558,560,571,573,600,616..617,619,622,
                     666..667,669,685)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270884"
     Site            order(553,556..557,559,574,576,608,610..611,753..754,
                     756..757,760)
                     /site_type="other"
                     /note="dimer interface (face-to-face) [polypeptide
                     binding]"
                     /db_xref="CDD:270884"
     Site            order(555,622,624,662,664,666,688,707..710)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270884"
     Site            order(684..699,703..710)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270884"
     Region          810..935
                     /region_name="RNase_Ire1"
                     /note="RNase domain (also known as the kinase extension
                     nuclease domain) of Ire1; cd10422"
                     /db_xref="CDD:199217"
     Site            order(810..811,814,818,882,900,930,933..934)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:199217"
     Site            order(812,908,912,915..916,920)
                     /site_type="other"
                     /note="kinase interface [polypeptide binding]"
                     /db_xref="CDD:199217"
     Site            order(814,818,821..822,879,882..883,886,899..901,929..930,
                     933)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:199217"
     CDS             1..951
                     /gene="ERN2"
                     /coded_by="XM_061153019.1:56..2911"
                     /db_xref="GeneID:133063540"
ORIGIN      
        1 masaargsgp wpplllqlaa llgtlrpqvq sftpenllfv stldgslhal skqtgdlkwt
       61 lkddpiiqgp myvtetvfls dpadgslyil gtqkqqglmr lpftipelvh aspcrssdgv
      121 fytgrkqdaw fvvdpesgkt qmtltterps tprlyigrtq ytvtmhdprt palrwnttfr
      181 rysappvdgs pgkymsylas cgmgllltvd pgsgavlwtq dlgvpvvgiy twhqenlrql
      241 phltlardtl hflalrwghi rlpasgpqdt athfsaldtq llmtlyvgkd eagfyvskal
      301 vhtgvalvpr gltlaptdgp tteevtlqvs geregspsta vrypsgsval psqwllighh
      361 epppllhttm lrvhpapgsg asgarpsesi qaptlflell slsreetpnl elhpekktse
      421 lypglgpqdl laasltalll ggwilflmss sswqrssstr ppwhlqallt slrilspspp
      481 tppfrarrgf rvpqskashw ktlkvdtiim lilwkrklka erfmtlppqt hkateqltvv
      541 gkisfnpkdv lgrgasgtfv frgqfegrav avkrllrecf slvrrevqll qesdrhpnvl
      601 ryfctergpq fhyialelcr aslreyvehp epdgwglepg talqqlmagl ahlhslhivh
      661 rdlkpgnvli agpdsqglgr vvlsdfglck klpagrcsfs lrsgipgteg wmapellqvp
      721 ppdsptsavd ifsagcvfyy vlsggshpfg eslyrqanil agaprlahle eeahdkvvar
      781 slveamlspl pqarpaarqv lahpffwsra kqlqffqdvs dwlekepeqg plvtaleagg
      841 sevvrsdwhk hisvplqtdl rrfrsykgts vrdllravrn kkhhyrelpe evrqtlgavp
      901 dsfvqyftnr fprlllhths amrscasesl flpyyppatg vggpspgaag s
//
LOCUS       XP_061009003             949 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase/endoribonuclease IRE2 isoform X3
            [Dama dama].
ACCESSION   XP_061009003
VERSION     XP_061009003.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153020.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..949
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..949
                     /product="serine/threonine-protein kinase/endoribonuclease
                     IRE2 isoform X3"
                     /calculated_mol_wt=103759
     Region          35..363
                     /region_name="Luminal_IRE1"
                     /note="The Luminal domain, a dimerization domain, of the
                     Serine/Threonine protein kinase, Inositol-requiring
                     protein 1; cd09769"
                     /db_xref="CDD:188875"
     Site            order(111..115,121,123..126,128..130,142,144..146,
                     157..158,166,168,183,185..187)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:188875"
     Region          515..805
                     /region_name="STKc_IRE1"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Inositol-requiring protein 1; cd13982"
                     /db_xref="CDD:270884"
     Site            order(515,538..539,541,564..565,567,569,574..578,590,621,
                     624..625,628..629,678,796,799)
                     /site_type="other"
                     /note="dimer interface (back-to-back) [polypeptide
                     binding]"
                     /db_xref="CDD:270884"
     Site            order(521,535,695..696,725,769..771,794)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:270884"
     Site            order(524..528,533,544,546,573,589..592,595,597,660,662,
                     664..665,667,683,686,705..708)
                     /site_type="active"
                     /db_xref="CDD:270884"
     Site            order(524..528,531,533,544,546,573,589..590,592,595,
                     664..665,667,683)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270884"
     Site            order(526,529..530,532,547,549,581,583..584,751..752,
                     754..755,758)
                     /site_type="other"
                     /note="dimer interface (face-to-face) [polypeptide
                     binding]"
                     /db_xref="CDD:270884"
     Site            order(528,595,597,660,662,664,686,705..708)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270884"
     Site            order(682..697,701..708)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270884"
     Region          808..933
                     /region_name="RNase_Ire1"
                     /note="RNase domain (also known as the kinase extension
                     nuclease domain) of Ire1; cd10422"
                     /db_xref="CDD:199217"
     Site            order(808..809,812,816,880,898,928,931..932)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:199217"
     Site            order(810,906,910,913..914,918)
                     /site_type="other"
                     /note="kinase interface [polypeptide binding]"
                     /db_xref="CDD:199217"
     Site            order(812,816,819..820,877,880..881,884,897..899,927..928,
                     931)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:199217"
     CDS             1..949
                     /gene="ERN2"
                     /coded_by="XM_061153020.1:56..2905"
                     /db_xref="GeneID:133063540"
ORIGIN      
        1 masaargsgp wpplllqlaa llgtlrpqvq sftpenllfv stldgslhal skqtgdlkwt
       61 lkddpiiqgp myvtetvfls dpadgslyil gtqkqqglmr lpftipelvh aspcrssdgv
      121 fytgrkqdaw fvvdpesgkt qmtltterps tprlyigrtq ytvtmhdprt palrwnttfr
      181 rysappvdgs pgkymsylas cgmgllltvd pgsgavlwtq dlgvpvvgiy twhqenlrql
      241 phltlardtl hflalrwghi rlpasgpqdt athfsaldtq llmtlyvgkd eagfyvskal
      301 vhtgvalvpr gltlaptdgp tteevtlqvs geregspsta vrypsgsval psqwllighh
      361 epppllhttm lrvhpapgsg asgarpsesi qaptlflell slsreetpnl elhpekktse
      421 lypglgpqdl laasltalll ggwilflmrq qqqqlaekqq hqaplapagp shisqdtqpq
      481 psnatlqsqk rlqsppeqgq pledpeaeql tvvgkisfnp kdvlgrgasg tfvfrgqfeg
      541 ravavkrllr ecfslvrrev qllqesdrhp nvlryfcter gpqfhyiale lcraslreyv
      601 ehpepdgwgl epgtalqqlm aglahlhslh igtgasrpps eplpaslssq lcsaltvhrd
      661 lkpgnvliag pdsqglgrvv lsdfglckkl pagrcsfslr sgipgtegwm apellqvppp
      721 dsptsavdif sagcvfyyvl sggshpfges lyrqanilag aprlahleee ahdkvvarsl
      781 veamlsplpq arpaarqvla hpffwsrakq lqffqdvsdw lekepeqgpl vtaleaggse
      841 vvrsdwhkhi svplqtdlrr frsykgtsvr dllravrnkk hhyrelpeev rqtlgavpds
      901 fvqyftnrfp rlllhthsam rscaseslfl pyyppatgvg gpspgaags
//
LOCUS       XP_061009004             948 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase/endoribonuclease IRE2 isoform X4
            [Dama dama].
ACCESSION   XP_061009004
VERSION     XP_061009004.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153021.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..948
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..948
                     /product="serine/threonine-protein kinase/endoribonuclease
                     IRE2 isoform X4"
                     /calculated_mol_wt=103631
     Region          35..363
                     /region_name="Luminal_IRE1"
                     /note="The Luminal domain, a dimerization domain, of the
                     Serine/Threonine protein kinase, Inositol-requiring
                     protein 1; cd09769"
                     /db_xref="CDD:188875"
     Site            order(111..115,121,123..126,128..130,142,144..146,
                     157..158,166,168,183,185..187)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:188875"
     Region          514..804
                     /region_name="STKc_IRE1"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Inositol-requiring protein 1; cd13982"
                     /db_xref="CDD:270884"
     Site            order(514,537..538,540,563..564,566,568,573..577,589,620,
                     623..624,627..628,677,795,798)
                     /site_type="other"
                     /note="dimer interface (back-to-back) [polypeptide
                     binding]"
                     /db_xref="CDD:270884"
     Site            order(520,534,694..695,724,768..770,793)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:270884"
     Site            order(523..527,532,543,545,572,588..591,594,596,659,661,
                     663..664,666,682,685,704..707)
                     /site_type="active"
                     /db_xref="CDD:270884"
     Site            order(523..527,530,532,543,545,572,588..589,591,594,
                     663..664,666,682)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270884"
     Site            order(525,528..529,531,546,548,580,582..583,750..751,
                     753..754,757)
                     /site_type="other"
                     /note="dimer interface (face-to-face) [polypeptide
                     binding]"
                     /db_xref="CDD:270884"
     Site            order(527,594,596,659,661,663,685,704..707)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270884"
     Site            order(681..696,700..707)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270884"
     Region          807..932
                     /region_name="RNase_Ire1"
                     /note="RNase domain (also known as the kinase extension
                     nuclease domain) of Ire1; cd10422"
                     /db_xref="CDD:199217"
     Site            order(807..808,811,815,879,897,927,930..931)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:199217"
     Site            order(809,905,909,912..913,917)
                     /site_type="other"
                     /note="kinase interface [polypeptide binding]"
                     /db_xref="CDD:199217"
     Site            order(811,815,818..819,876,879..880,883,896..898,926..927,
                     930)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:199217"
     CDS             1..948
                     /gene="ERN2"
                     /coded_by="XM_061153021.1:56..2902"
                     /db_xref="GeneID:133063540"
ORIGIN      
        1 masaargsgp wpplllqlaa llgtlrpqvq sftpenllfv stldgslhal skqtgdlkwt
       61 lkddpiiqgp myvtetvfls dpadgslyil gtqkqqglmr lpftipelvh aspcrssdgv
      121 fytgrkqdaw fvvdpesgkt qmtltterps tprlyigrtq ytvtmhdprt palrwnttfr
      181 rysappvdgs pgkymsylas cgmgllltvd pgsgavlwtq dlgvpvvgiy twhqenlrql
      241 phltlardtl hflalrwghi rlpasgpqdt athfsaldtq llmtlyvgkd eagfyvskal
      301 vhtgvalvpr gltlaptdgp tteevtlqvs geregspsta vrypsgsval psqwllighh
      361 epppllhttm lrvhpapgsg asgarpsesi qaptlflell slsreetpnl elhpekktse
      421 lypglgpqdl laasltalll ggwilflmrq qqqlaekqqh qaplapagps hisqdtqpqp
      481 snatlqsqkr lqsppeqgqp ledpeaeqlt vvgkisfnpk dvlgrgasgt fvfrgqfegr
      541 avavkrllre cfslvrrevq llqesdrhpn vlryfcterg pqfhyialel craslreyve
      601 hpepdgwgle pgtalqqlma glahlhslhi gtgasrppse plpaslssql csaltvhrdl
      661 kpgnvliagp dsqglgrvvl sdfglckklp agrcsfslrs gipgtegwma pellqvpppd
      721 sptsavdifs agcvfyyvls ggshpfgesl yrqanilaga prlahleeea hdkvvarslv
      781 eamlsplpqa rpaarqvlah pffwsrakql qffqdvsdwl ekepeqgplv taleaggsev
      841 vrsdwhkhis vplqtdlrrf rsykgtsvrd llravrnkkh hyrelpeevr qtlgavpdsf
      901 vqyftnrfpr lllhthsamr scaseslflp yyppatgvgg pspgaags
//
LOCUS       XP_061009005             924 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase/endoribonuclease IRE2 isoform X5
            [Dama dama].
ACCESSION   XP_061009005
VERSION     XP_061009005.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153022.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..924
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..924
                     /product="serine/threonine-protein kinase/endoribonuclease
                     IRE2 isoform X5"
                     /calculated_mol_wt=101349
     Region          35..363
                     /region_name="Luminal_IRE1"
                     /note="The Luminal domain, a dimerization domain, of the
                     Serine/Threonine protein kinase, Inositol-requiring
                     protein 1; cd09769"
                     /db_xref="CDD:188875"
     Site            order(111..115,121,123..126,128..130,142,144..146,
                     157..158,166,168,183,185..187)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:188875"
     Region          515..780
                     /region_name="STKc_IRE1"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Inositol-requiring protein 1; cd13982"
                     /db_xref="CDD:270884"
     Site            order(515,538..539,541,564..565,567,569,574..578,590,621,
                     624..625,628..629,653,771,774)
                     /site_type="other"
                     /note="dimer interface (back-to-back) [polypeptide
                     binding]"
                     /db_xref="CDD:270884"
     Site            order(521,535,670..671,700,744..746,769)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:270884"
     Site            order(524..528,533,544,546,573,589..592,595,597,635,637,
                     639..640,642,658,661,680..683)
                     /site_type="active"
                     /db_xref="CDD:270884"
     Site            order(524..528,531,533,544,546,573,589..590,592,595,
                     639..640,642,658)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270884"
     Site            order(526,529..530,532,547,549,581,583..584,726..727,
                     729..730,733)
                     /site_type="other"
                     /note="dimer interface (face-to-face) [polypeptide
                     binding]"
                     /db_xref="CDD:270884"
     Site            order(528,595,597,635,637,639,661,680..683)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270884"
     Site            order(657..672,676..683)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270884"
     Region          783..908
                     /region_name="RNase_Ire1"
                     /note="RNase domain (also known as the kinase extension
                     nuclease domain) of Ire1; cd10422"
                     /db_xref="CDD:199217"
     Site            order(783..784,787,791,855,873,903,906..907)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:199217"
     Site            order(785,881,885,888..889,893)
                     /site_type="other"
                     /note="kinase interface [polypeptide binding]"
                     /db_xref="CDD:199217"
     Site            order(787,791,794..795,852,855..856,859,872..874,902..903,
                     906)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:199217"
     CDS             1..924
                     /gene="ERN2"
                     /coded_by="XM_061153022.1:56..2830"
                     /db_xref="GeneID:133063540"
ORIGIN      
        1 masaargsgp wpplllqlaa llgtlrpqvq sftpenllfv stldgslhal skqtgdlkwt
       61 lkddpiiqgp myvtetvfls dpadgslyil gtqkqqglmr lpftipelvh aspcrssdgv
      121 fytgrkqdaw fvvdpesgkt qmtltterps tprlyigrtq ytvtmhdprt palrwnttfr
      181 rysappvdgs pgkymsylas cgmgllltvd pgsgavlwtq dlgvpvvgiy twhqenlrql
      241 phltlardtl hflalrwghi rlpasgpqdt athfsaldtq llmtlyvgkd eagfyvskal
      301 vhtgvalvpr gltlaptdgp tteevtlqvs geregspsta vrypsgsval psqwllighh
      361 epppllhttm lrvhpapgsg asgarpsesi qaptlflell slsreetpnl elhpekktse
      421 lypglgpqdl laasltalll ggwilflmrq qqqqlaekqq hqaplapagp shisqdtqpq
      481 psnatlqsqk rlqsppeqgq pledpeaeql tvvgkisfnp kdvlgrgasg tfvfrgqfeg
      541 ravavkrllr ecfslvrrev qllqesdrhp nvlryfcter gpqfhyiale lcraslreyv
      601 ehpepdgwgl epgtalqqlm aglahlhslh ivhrdlkpgn vliagpdsqg lgrvvlsdfg
      661 lckklpagrc sfslrsgipg tegwmapell qvpppdspts avdifsagcv fyyvlsggsh
      721 pfgeslyrqa nilagaprla hleeeahdkv varslveaml splpqarpaa rqvlahpffw
      781 srakqlqffq dvsdwlekep eqgplvtale aggsevvrsd whkhisvplq tdlrrfrsyk
      841 gtsvrdllra vrnkkhhyre lpeevrqtlg avpdsfvqyf tnrfprlllh thsamrscas
      901 eslflpyypp atgvggpspg aags
//
LOCUS       XP_061009006             923 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase/endoribonuclease IRE2 isoform X6
            [Dama dama].
ACCESSION   XP_061009006
VERSION     XP_061009006.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153023.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..923
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..923
                     /product="serine/threonine-protein kinase/endoribonuclease
                     IRE2 isoform X6"
                     /calculated_mol_wt=101221
     Region          35..363
                     /region_name="Luminal_IRE1"
                     /note="The Luminal domain, a dimerization domain, of the
                     Serine/Threonine protein kinase, Inositol-requiring
                     protein 1; cd09769"
                     /db_xref="CDD:188875"
     Site            order(111..115,121,123..126,128..130,142,144..146,
                     157..158,166,168,183,185..187)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:188875"
     Region          514..779
                     /region_name="STKc_IRE1"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Inositol-requiring protein 1; cd13982"
                     /db_xref="CDD:270884"
     Site            order(514,537..538,540,563..564,566,568,573..577,589,620,
                     623..624,627..628,652,770,773)
                     /site_type="other"
                     /note="dimer interface (back-to-back) [polypeptide
                     binding]"
                     /db_xref="CDD:270884"
     Site            order(520,534,669..670,699,743..745,768)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:270884"
     Site            order(523..527,532,543,545,572,588..591,594,596,634,636,
                     638..639,641,657,660,679..682)
                     /site_type="active"
                     /db_xref="CDD:270884"
     Site            order(523..527,530,532,543,545,572,588..589,591,594,
                     638..639,641,657)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270884"
     Site            order(525,528..529,531,546,548,580,582..583,725..726,
                     728..729,732)
                     /site_type="other"
                     /note="dimer interface (face-to-face) [polypeptide
                     binding]"
                     /db_xref="CDD:270884"
     Site            order(527,594,596,634,636,638,660,679..682)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270884"
     Site            order(656..671,675..682)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270884"
     Region          782..907
                     /region_name="RNase_Ire1"
                     /note="RNase domain (also known as the kinase extension
                     nuclease domain) of Ire1; cd10422"
                     /db_xref="CDD:199217"
     Site            order(782..783,786,790,854,872,902,905..906)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:199217"
     Site            order(784,880,884,887..888,892)
                     /site_type="other"
                     /note="kinase interface [polypeptide binding]"
                     /db_xref="CDD:199217"
     Site            order(786,790,793..794,851,854..855,858,871..873,901..902,
                     905)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:199217"
     CDS             1..923
                     /gene="ERN2"
                     /coded_by="XM_061153023.1:56..2827"
                     /db_xref="GeneID:133063540"
ORIGIN      
        1 masaargsgp wpplllqlaa llgtlrpqvq sftpenllfv stldgslhal skqtgdlkwt
       61 lkddpiiqgp myvtetvfls dpadgslyil gtqkqqglmr lpftipelvh aspcrssdgv
      121 fytgrkqdaw fvvdpesgkt qmtltterps tprlyigrtq ytvtmhdprt palrwnttfr
      181 rysappvdgs pgkymsylas cgmgllltvd pgsgavlwtq dlgvpvvgiy twhqenlrql
      241 phltlardtl hflalrwghi rlpasgpqdt athfsaldtq llmtlyvgkd eagfyvskal
      301 vhtgvalvpr gltlaptdgp tteevtlqvs geregspsta vrypsgsval psqwllighh
      361 epppllhttm lrvhpapgsg asgarpsesi qaptlflell slsreetpnl elhpekktse
      421 lypglgpqdl laasltalll ggwilflmrq qqqlaekqqh qaplapagps hisqdtqpqp
      481 snatlqsqkr lqsppeqgqp ledpeaeqlt vvgkisfnpk dvlgrgasgt fvfrgqfegr
      541 avavkrllre cfslvrrevq llqesdrhpn vlryfcterg pqfhyialel craslreyve
      601 hpepdgwgle pgtalqqlma glahlhslhi vhrdlkpgnv liagpdsqgl grvvlsdfgl
      661 ckklpagrcs fslrsgipgt egwmapellq vpppdsptsa vdifsagcvf yyvlsggshp
      721 fgeslyrqan ilagaprlah leeeahdkvv arslveamls plpqarpaar qvlahpffws
      781 rakqlqffqd vsdwlekepe qgplvtalea ggsevvrsdw hkhisvplqt dlrrfrsykg
      841 tsvrdllrav rnkkhhyrel peevrqtlga vpdsfvqyft nrfprlllht hsamrscase
      901 slflpyyppa tgvggpspga ags
//
LOCUS       XP_061009007             878 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase/endoribonuclease IRE2 isoform X7
            [Dama dama].
ACCESSION   XP_061009007
VERSION     XP_061009007.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153024.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..878
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..878
                     /product="serine/threonine-protein kinase/endoribonuclease
                     IRE2 isoform X7"
                     /calculated_mol_wt=96694
     Region          <1..265
                     /region_name="Luminal_IRE1_like"
                     /note="The Luminal domain, a dimerization domain, of
                     Inositol-requiring protein 1-like proteins; cl14874"
                     /db_xref="CDD:276097"
     Site            order(13..17,23,25..28,30..32,44,46..48,59..60,68,70,85,
                     87..89)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:188873"
     Region          444..734
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(453..456,460,462,473,475,502,518..521,589,593..594,
                     596,611..612)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          737..862
                     /region_name="RNase_Ire1"
                     /note="RNase domain (also known as the kinase extension
                     nuclease domain) of Ire1; cd10422"
                     /db_xref="CDD:199217"
     Site            order(737..738,741,745,809,827,857,860..861)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:199217"
     Site            order(739,835,839,842..843,847)
                     /site_type="other"
                     /note="kinase interface [polypeptide binding]"
                     /db_xref="CDD:199217"
     Site            order(741,745,748..749,806,809..810,813,826..828,856..857,
                     860)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:199217"
     CDS             1..878
                     /gene="ERN2"
                     /coded_by="XM_061153024.1:92..2728"
                     /db_xref="GeneID:133063540"
ORIGIN      
        1 mrlpftipel vhaspcrssd gvfytgrkqd awfvvdpesg ktqmtltter pstprlyigr
       61 tqytvtmhdp rtpalrwntt frrysappvd gspgkymsyl ascgmglllt vdpgsgavlw
      121 tqdlgvpvvg iytwhqenlr qlphltlard tlhflalrwg hirlpasgpq dtathfsald
      181 tqllmtlyvg kdeagfyvsk alvhtgvalv prgltlaptd gptteevtlq vsgeregsps
      241 tavrypsgsv alpsqwllig hhepppllht tmlrvhpapg sgasgarpse siqaptlfle
      301 llslsreetp nlelhpekkt selypglgpq dllaasltal llggwilflm sssswqrsss
      361 trppwhlqal ltslrilsps pptppfrarr gfrvpqskas hwktlkvdti imlilwkrkl
      421 kaerfmtlpp qthkateqlt vvgkisfnpk dvlgrgasgt fvfrgqfegr avavkrllre
      481 cfslvrrevq llqesdrhpn vlryfcterg pqfhyialel craslreyve hpepdgwgle
      541 pgtalqqlma glahlhslhi gtgasrppse plpaslssql csaltvhrdl kpgnvliagp
      601 dsqglgrvvl sdfglckklp agrcsfslrs gipgtegwma pellqvpppd sptsavdifs
      661 agcvfyyvls ggshpfgesl yrqanilaga prlahleeea hdkvvarslv eamlsplpqa
      721 rpaarqvlah pffwsrakql qffqdvsdwl ekepeqgplv taleaggsev vrsdwhkhis
      781 vplqtdlrrf rsykgtsvrd llravrnkkh hyrelpeevr qtlgavpdsf vqyftnrfpr
      841 lllhthsamr scaseslflp yyppatgvgg pspgaags
//
LOCUS       XP_061009008             602 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase PLK1 [Dama dama].
ACCESSION   XP_061009008
VERSION     XP_061009008.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153025.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..602
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..602
                     /product="serine/threonine-protein kinase PLK1"
                     /calculated_mol_wt=67819
     Region          43..307
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(57..60,63,65,78,80,112,128..131,174,178..179,181,
                     191..192)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          405..492
                     /region_name="POLO_box_1"
                     /note="First polo-box domain (PBD) of polo-like kinases
                     Plk1, Plk2, Plk3, and Plk5; cd13118"
                     /db_xref="CDD:240561"
     Site            order(411..414,483,485..489)
                     /site_type="other"
                     /note="phosphopeptide binding site [polypeptide binding]"
                     /db_xref="CDD:240561"
     Region          507..588
                     /region_name="POLO_box_2"
                     /note="Second polo-box domain (PBD) of polo-like kinases
                     Plk1, Plk2, Plk3, and Plk5; cd13117"
                     /db_xref="CDD:240560"
     Site            order(514,533,536,538)
                     /site_type="other"
                     /note="phosphopeptide binding site [polypeptide binding]"
                     /db_xref="CDD:240560"
     CDS             1..602
                     /gene="PLK1"
                     /coded_by="XM_061153025.1:630..2438"
                     /db_xref="GeneID:133063542"
ORIGIN      
        1 msaaatagkl arapadpgka pgvaapgapa aappakeipe vlvdprsrrr ylrgrflgkg
       61 gfakcfeisd adtkevfagk ivpkslllkp hqkekmsmei sihrslahqh vvgfhgffed
      121 ndfvfvvlel crrrsllelh krrkaltepe aryylrqivl gcqylhgnrv ihrdlklgnl
      181 flnedlevki gdfglatkve ydgerkktlc gtpnyiapev lskkghsfev dvwsigcimy
      241 tllvgkppfe tsclketylr iknneysipk hinpvatsli kkmlqpdpta rptihellnd
      301 efftsgyipa rlpitcltip prfsiapssl dpsnrkpltv lnkgmenpmp erprekeepv
      361 vreasepvdc hladmlqqlh svnaskpser glvrqeeaed pacipifwvs kwvdysdkyg
      421 lgyqlcdnsv gvlfndstrl ilysdgdslq yierdgaesy ltvsshptsl vkkitllkyf
      481 rnymsehllk aganitpreg delarlpylr twfrtrsaii lhlsngcvqi nffqdhtkli
      541 lcplmaavty idekrdfrty rlslleeygc skelasrlry aramvdklls srsaanrlka
      601 ss
//
LOCUS       XP_061009009             196 aa            linear   MAM 02-DEC-2023
DEFINITION  calcineurin B homologous protein 2 [Dama dama].
ACCESSION   XP_061009009
VERSION     XP_061009009.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153026.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..196
                     /product="calcineurin B homologous protein 2"
                     /calculated_mol_wt=22377
     Region          30..184
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..196
                     /gene="CHP2"
                     /coded_by="XM_061153026.1:168..758"
                     /db_xref="GeneID:133063543"
ORIGIN      
        1 mgsrsshaar ipdvdsirre tgfsqasllr lyhrfraldr tgkgylsrid lqqiealavn
       61 plgdriidsf fpdgslrldf pgfvrvlahf rpvdeeedgn rdpkepepln srmnklrfaf
      121 qlydldrdgk isrhemlqvl rlmvgvqvte eqlesiadrt vqeadedgdg avsfleftks
      181 lekmnieqkm sirilk
//
LOCUS       XP_061009011             673 aa            linear   MAM 02-DEC-2023
DEFINITION  protein kinase C beta type isoform X1 [Dama dama].
ACCESSION   XP_061009011
VERSION     XP_061009011.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153028.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..673
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..673
                     /product="protein kinase C beta type isoform X1"
                     /calculated_mol_wt=76830
     Region          35..92
                     /region_name="C1_cPKC_rpt1"
                     /note="first protein kinase C conserved region 1 (C1
                     domain) found in the classical (or conventional) protein
                     kinase C (cPKC) family; cd20833"
                     /db_xref="CDD:410383"
     Site            order(42..48,56..60,63)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410383"
     Region          102..155
                     /region_name="C1_cPKC_rpt2"
                     /note="second protein kinase C conserved region 1 (C1
                     domain) found in the classical (or conventional) protein
                     kinase C (cPKC) family; cd20836"
                     /db_xref="CDD:410386"
     Site            order(107..113,121..125,128)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410386"
     Region          159..289
                     /region_name="C2_PKC_alpha_gamma"
                     /note="C2 domain in Protein Kinase C (PKC) alpha and
                     gamma; cd04026"
                     /db_xref="CDD:175992"
     Site            order(187,193,246,248,254)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175992"
     Region          341..663
                     /region_name="STKc_cPKC_beta"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Classical Protein Kinase C beta; cd05616"
                     /db_xref="CDD:270767"
     Site            order(348..352,356,369,371,404,420..421,423,427,429,466,
                     468,470..471,473,483..484,487,501..506,533,539,542)
                     /site_type="active"
                     /db_xref="CDD:270767"
     Site            order(348..352,356,369,371,404,421..423,427,466,468,
                     470..471,473,483..484)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270767"
     Site            order(352,427,429,466,468,470,487,501..506,533,539,542)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270767"
     Site            483..506
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270767"
     Site            641
                     /site_type="other"
                     /note="turn motif phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:270767"
     Site            656..661
                     /site_type="other"
                     /note="hydrophobic motif (HM)"
                     /db_xref="CDD:270767"
     CDS             1..673
                     /gene="PRKCB"
                     /coded_by="XM_061153028.1:136..2157"
                     /db_xref="GeneID:133063544"
ORIGIN      
        1 madpavgppp segeestvrf arkgalrqkn vhevknhkft arffkqptfc shctdfiwgf
       61 gkqgfqcqvc cfvvhkrche fvtfscpgad kgpasddprs khkfkihtys sptfcdhcgs
      121 llyglihqgm kcdtcmmnvh krcvmnvpsl cgtdhterrg riyiqahier evlivvvrda
      181 knlvpmdpng lsdpyvklkl ipdpkseskq ktktikcsln pewnetfrfq lkesdkdrrl
      241 sveiwdwdlt srndfmgsls fgiselqkag vdgwfkllsq eegeyfnvpv ppegsegnee
      301 lrqkferaki gpgpktpeek ttntiskfdn ngnrdrmklt dfnflmvlgk gsfgkvmlse
      361 rkgtdelyav kilkkdvviq dddvectmve krvlalpgkp pfltqlhscf qtmdrlyfvm
      421 eyvnggdlmy hiqqvgrfke phavfyaaei aiglfflqsk giiyrdlkld nvmldseghi
      481 kiadfgmcke niwdgvttkt fcgtpdyiap eiiayqpygk svdwwafgvl lyemlagqap
      541 fegededelf qsimehnvay pksmskeava ickglmtkhp gkrlgcgpeg erdikehaff
      601 ryidwekler keiqppykpk acgrnaenfd rfftrhppvl tppdqevirn idqsefegfs
      661 fvnseflkpe vks
//
LOCUS       XP_061009012             671 aa            linear   MAM 02-DEC-2023
DEFINITION  protein kinase C beta type isoform X2 [Dama dama].
ACCESSION   XP_061009012
VERSION     XP_061009012.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153029.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..671
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..671
                     /product="protein kinase C beta type isoform X2"
                     /calculated_mol_wt=76687
     Region          35..92
                     /region_name="C1_cPKC_rpt1"
                     /note="first protein kinase C conserved region 1 (C1
                     domain) found in the classical (or conventional) protein
                     kinase C (cPKC) family; cd20833"
                     /db_xref="CDD:410383"
     Site            order(42..48,56..60,63)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410383"
     Region          102..155
                     /region_name="C1_cPKC_rpt2"
                     /note="second protein kinase C conserved region 1 (C1
                     domain) found in the classical (or conventional) protein
                     kinase C (cPKC) family; cd20836"
                     /db_xref="CDD:410386"
     Site            order(107..113,121..125,128)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410386"
     Region          159..289
                     /region_name="C2_PKC_alpha_gamma"
                     /note="C2 domain in Protein Kinase C (PKC) alpha and
                     gamma; cd04026"
                     /db_xref="CDD:175992"
     Site            order(187,193,246,248,254)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175992"
     Region          341..664
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(348..351,354,356,369,371,404,420..423,466,470..471,
                     473,483..484)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..671
                     /gene="PRKCB"
                     /coded_by="XM_061153029.1:133..2148"
                     /db_xref="GeneID:133063544"
ORIGIN      
        1 madpavgppp segeestvrf arkgalrqkn vhevknhkft arffkqptfc shctdfiwgf
       61 gkqgfqcqvc cfvvhkrche fvtfscpgad kgpasddprs khkfkihtys sptfcdhcgs
      121 llyglihqgm kcdtcmmnvh krcvmnvpsl cgtdhterrg riyiqahier evlivvvrda
      181 knlvpmdpng lsdpyvklkl ipdpkseskq ktktikcsln pewnetfrfq lkesdkdrrl
      241 sveiwdwdlt srndfmgsls fgiselqkag vdgwfkllsq eegeyfnvpv ppegsegnee
      301 lrqkferaki gpgpktpeek ttntiskfdn ngnrdrmklt dfnflmvlgk gsfgkvmlse
      361 rkgtdelyav kilkkdvviq dddvectmve krvlalpgkp pfltqlhscf qtmdrlyfvm
      421 eyvnggdlmy hiqqvgrfke phavfyaaei aiglfflqsk giiyrdlkld nvmldseghi
      481 kiadfgmcke niwdgvttkt fcgtpdyiap eiiayqpygk svdwwafgvl lyemlagqap
      541 fegededelf qsimehnvay pksmskeava ickglmtkhp gkrlgcgpeg erdikehaff
      601 ryidwekler keiqppykpk ardkrdtsnf dkeftrqpve ltptdklfim nldqnefagf
      661 sytnpefvin v
//
LOCUS       XP_061009013             633 aa            linear   MAM 02-DEC-2023
DEFINITION  protein kinase C beta type isoform X3 [Dama dama].
ACCESSION   XP_061009013
VERSION     XP_061009013.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153030.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..633
                     /product="protein kinase C beta type isoform X3"
                     /calculated_mol_wt=72146
     Region          35..92
                     /region_name="C1_cPKC_rpt1"
                     /note="first protein kinase C conserved region 1 (C1
                     domain) found in the classical (or conventional) protein
                     kinase C (cPKC) family; cd20833"
                     /db_xref="CDD:410383"
     Site            order(42..48,56..60,63)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410383"
     Region          102..155
                     /region_name="C1_cPKC_rpt2"
                     /note="second protein kinase C conserved region 1 (C1
                     domain) found in the classical (or conventional) protein
                     kinase C (cPKC) family; cd20836"
                     /db_xref="CDD:410386"
     Site            order(107..113,121..125,128)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410386"
     Region          159..289
                     /region_name="C2_PKC_alpha_gamma"
                     /note="C2 domain in Protein Kinase C (PKC) alpha and
                     gamma; cd04026"
                     /db_xref="CDD:175992"
     Site            order(187,193,246,248,254)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175992"
     Region          341..621
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(348..351,354,356,369,371,404,420..423,466,470..471,
                     473,483..484)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..633
                     /gene="PRKCB"
                     /coded_by="XM_061153030.1:139..2040"
                     /db_xref="GeneID:133063544"
ORIGIN      
        1 madpavgppp segeestvrf arkgalrqkn vhevknhkft arffkqptfc shctdfiwgf
       61 gkqgfqcqvc cfvvhkrche fvtfscpgad kgpasddprs khkfkihtys sptfcdhcgs
      121 llyglihqgm kcdtcmmnvh krcvmnvpsl cgtdhterrg riyiqahier evlivvvrda
      181 knlvpmdpng lsdpyvklkl ipdpkseskq ktktikcsln pewnetfrfq lkesdkdrrl
      241 sveiwdwdlt srndfmgsls fgiselqkag vdgwfkllsq eegeyfnvpv ppegsegnee
      301 lrqkferaki gpgpktpeek ttntiskfdn ngnrdrmklt dfnflmvlgk gsfgkvmlse
      361 rkgtdelyav kilkkdvviq dddvectmve krvlalpgkp pfltqlhscf qtmdrlyfvm
      421 eyvnggdlmy hiqqvgrfke phavfyaaei aiglfflqsk giiyrdlkld nvmldseghi
      481 kiadfgmcke niwdgvttkt fcgtpdyiap eiiayqpygk svdwwafgvl lyemlagqap
      541 fegededelf qsimehnvay pksmskeava ickglmtkhp gkrlgcgpeg erdikehaff
      601 ryidwekler keiqppykpk aglahrrysr svs
//
LOCUS       XP_061009014            1798 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase RBBP6 isoform X1 [Dama dama].
ACCESSION   XP_061009014
VERSION     XP_061009014.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153031.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1798
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1798
                     /product="E3 ubiquitin-protein ligase RBBP6 isoform X1"
                     /calculated_mol_wt=201441
     Region          2..419
                     /region_name="COG5222"
                     /note="Uncharacterized conserved protein, contains RING
                     Zn-finger [General function prediction only]"
                     /db_xref="CDD:227547"
     Region          <943..1619
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     CDS             1..1798
                     /gene="RBBP6"
                     /coded_by="XM_061153031.1:1106..6502"
                     /db_xref="GeneID:133063545"
ORIGIN      
        1 mscvhykfss klnydtvtfd glhislcdlk kqimgreklk aadcdlqitn aqtkeeytdd
       61 nalipknssv ivrripiggv kstsktyvis rtepvmgtsk aiddssasis laqltktanl
      121 aeanaseedk ikammsqsgh eydpinymkk plgppppsyt cfrcgkpghy ikncptngdk
      181 nfesgprikk stgiprsfmm evkdpnmkga mltntgkyai ptidaeayai gkkekppflp
      241 eepsssseed dpipdellcl ickdimtdav vipccgnsyc decirtalle sdehtcptch
      301 qndvspdali ankflrqavn nfknetgytk rlrkqlpppp ppippprpli qrnlqplmrs
      361 pisrqqdplm ipvtsssthp apsmssltsn qsslappvpg npssasapvp ditatvsisv
      421 hseksdgpfr dsdnkilpaa alasehskga ssiaitalme ekgyqvpvlg tpsllgqsll
      481 hgqlipttgp vrinaarpgg grpgwehsnk lgylvsppqq irrgerscyr sinrgrhhse
      541 rsqrtqgpsl patpvfvpvp ppplypppph tlplapgvpp pqfspqfppg qpppagysvp
      601 ppgfppapan lsapwvssgv qtahsntipt tqapplsree fyreqrrlke eekkksklde
      661 ftndfakelm eykkiqkerr rsfsrskspy sgssysrssy tysksrsgst rsrsysrsfs
      721 rshsrsysrs ppyprrgrgk srnyrsrsrs hgyhrsrsrs ppyrryhsrs rspqafrgqs
      781 pnkrnvpqge tereyfnrfr evpppydvka yygrsvdfrd pfekeryrew erkyrewyek
      841 yykgyatgaq prpsanrenf sperflplnl rnspftrgrr edysggqshr srnvggnype
      901 klssrdshnq kdnakskdke genapgdgkg nkhkkhrkrr kgeesegfln pelldtsrks
      961 reptsgeenk tdslfvlpsr ddatpvrdep mdaesitfks vsekdkrekd kpkakgdktk
     1021 rkndgstvsk ketvvkpakg pqekldgere ksprsepplk kakeetpktd nvksssssqk
     1081 dektvgtprk ahsksvkehq etkpvkeekv kkdyskdiks ekitskeekt rkpnekskpl
     1141 dskgekrkrk teeksvdkdf esssmkvskl evteivkpsp krkmeldiek mdrtpekdkt
     1201 sssaapakki klnretgkki gstenvsntk epseklests skvkqekikg kvrrkvtgte
     1261 gssstlvdyt stsstggspv rkseektdtk rtviktmeey nndntapaed viimiqvpqs
     1321 kwdkddfese eedvkstsqp vssvgkpasv iknvstkppn avkyaekese ssekiqkltk
     1381 evsheiaqhe vrssknsass ekgktkdreh svlekenpek rknnstqpek dgnldrlneq
     1441 gnfkslsqss ketrtsgked khdsirgssn kdftpnrdkk tdydnreyss skrrdernel
     1501 trrkdspsrs kdsasgqkak preerdlpkk gtgeskksns sptrdkkphd hkatydtkrl
     1561 seetksvdkn pckdrekhml eaknnkessg nkslyilnpp dpqiekeqvt gqidkntikp
     1621 kpqlshssrl ssdltretde aafepdynes dsesnvsike eetagkvske lkdkvvekak
     1681 esldtaavsq agvprsqsqs spsvspsrsh spsgsqtrsh sssassaesq dskkkkkkke
     1741 kkkhkkhkkh kkhkkhagae aeleksqkhk hkkkkskksk dkekekekdd qkvksvtv
//
LOCUS       XP_061009015            1764 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase RBBP6 isoform X2 [Dama dama].
ACCESSION   XP_061009015
VERSION     XP_061009015.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153032.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1764
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1764
                     /product="E3 ubiquitin-protein ligase RBBP6 isoform X2"
                     /calculated_mol_wt=197164
     Region          2..419
                     /region_name="COG5222"
                     /note="Uncharacterized conserved protein, contains RING
                     Zn-finger [General function prediction only]"
                     /db_xref="CDD:227547"
     Region          <909..1585
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     CDS             1..1764
                     /gene="RBBP6"
                     /coded_by="XM_061153032.1:1106..6400"
                     /db_xref="GeneID:133063545"
ORIGIN      
        1 mscvhykfss klnydtvtfd glhislcdlk kqimgreklk aadcdlqitn aqtkeeytdd
       61 nalipknssv ivrripiggv kstsktyvis rtepvmgtsk aiddssasis laqltktanl
      121 aeanaseedk ikammsqsgh eydpinymkk plgppppsyt cfrcgkpghy ikncptngdk
      181 nfesgprikk stgiprsfmm evkdpnmkga mltntgkyai ptidaeayai gkkekppflp
      241 eepsssseed dpipdellcl ickdimtdav vipccgnsyc decirtalle sdehtcptch
      301 qndvspdali ankflrqavn nfknetgytk rlrkqlpppp ppippprpli qrnlqplmrs
      361 pisrqqdplm ipvtsssthp apsmssltsn qsslappvpg npssasapvp ditatvsisv
      421 hseksdgpfr dsdnkilpaa alasehskga ssiaitalme ekgyqvpvlg tpsllgqsll
      481 hgqlipttgp vrinaarpgg grpgwehsnk lgylvsppqq irrgerscyr sinrgrhhse
      541 rsqrtqgpsl patpvfvpvp ppplypppph tlplapgvpp pqfspqfppg qpppagysvp
      601 ppgfppapan lsapwvssgv qtahsntipt tqapplsree fyreqrrlke eskspysgss
      661 ysrssytysk srsgstrsrs ysrsfsrshs rsysrsppyp rrgrgksrny rsrsrshgyh
      721 rsrsrsppyr ryhsrsrspq afrgqspnkr nvpqgetere yfnrfrevpp pydvkayygr
      781 svdfrdpfek eryrewerky rewyekyykg yatgaqprps anrenfsper flplnlrnsp
      841 ftrgrredys ggqshrsrnv ggnypeklss rdshnqkdna kskdkegena pgdgkgnkhk
      901 khrkrrkgee segflnpell dtsrksrept sgeenktdsl fvlpsrddat pvrdepmdae
      961 sitfksvsek dkrekdkpka kgdktkrknd gstvskketv vkpakgpqek ldgerekspr
     1021 sepplkkake etpktdnvks ssssqkdekt vgtprkahsk svkehqetkp vkeekvkkdy
     1081 skdiksekit skeektrkpn ekskpldskg ekrkrkteek svdkdfesss mkvsklevte
     1141 ivkpspkrkm eldiekmdrt pekdktsssa apakkiklnr etgkkigste nvsntkepse
     1201 klestsskvk qekikgkvrr kvtgtegsss tlvdytstss tggspvrkse ektdtkrtvi
     1261 ktmeeynndn tapaedviim iqvpqskwdk ddfeseeedv kstsqpvssv gkpasviknv
     1321 stkppnavky aekesessek iqkltkevsh eiaqhevrss knsassekgk tkdrehsvle
     1381 kenpekrknn stqpekdgnl drlneqgnfk slsqssketr tsgkedkhds irgssnkdft
     1441 pnrdkktdyd nreyssskrr derneltrrk dspsrskdsa sgqkakpree rdlpkkgtge
     1501 skksnssptr dkkphdhkat ydtkrlseet ksvdknpckd rekhmleakn nkessgnksl
     1561 yilnppdpqi ekeqvtgqid kntikpkpql shssrlssdl tretdeaafe pdynesdses
     1621 nvsikeeeta gkvskelkdk vvekakesld taavsqagvp rsqsqsspsv spsrshspsg
     1681 sqtrshsssa ssaesqdskk kkkkkekkkh kkhkkhkkhk khagaeaele ksqkhkhkkk
     1741 kskkskdkek ekekddqkvk svtv
//
LOCUS       XP_061009016            1901 aa            linear   MAM 02-DEC-2023
DEFINITION  trinucleotide repeat-containing gene 6A protein isoform X1 [Dama
            dama].
ACCESSION   XP_061009016
VERSION     XP_061009016.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153033.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1901
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1901
                     /product="trinucleotide repeat-containing gene 6A protein
                     isoform X1"
                     /calculated_mol_wt=203549
     Region          <487..>681
                     /region_name="ser_rich_anae_1"
                     /note="serine-rich protein; NF033849"
                     /db_xref="CDD:468206"
     Region          <610..>858
                     /region_name="ser_rich_anae_1"
                     /note="serine-rich protein; NF033849"
                     /db_xref="CDD:468206"
     Region          1063..1190
                     /region_name="Ago_hook"
                     /note="Argonaute hook; pfam10427"
                     /db_xref="CDD:463088"
     Region          <1268..1420
                     /region_name="M_domain"
                     /note="M domain of GW182; pfam12938"
                     /db_xref="CDD:432890"
     Region          1445..1706
                     /region_name="TNRC6-PABC_bdg"
                     /note="TNRC6-PABC binding domain; pfam16608"
                     /db_xref="CDD:465195"
     Region          1714..1805
                     /region_name="RRM_TNRC6A"
                     /note="RNA recognition motif (RRM) found in vertebrate
                     GW182 autoantigen; cd12711"
                     /db_xref="CDD:410110"
     CDS             1..1901
                     /gene="TNRC6A"
                     /coded_by="XM_061153033.1:165..5870"
                     /db_xref="GeneID:133063546"
ORIGIN      
        1 mreleakatk dvernlsrdl vqeeeqlmee kkkkkddkkk keaaqkkate qkikvpeqik
       61 psvsqpqpan snngtstats tnnnakrata nnqqqqpqpq pqpqqhpqqp pqpqpptqal
      121 pryprevppr frhqehkqll krgqhfpvia anlgsavkvl ssqsessalt nqqpqnngev
      181 qisknqsdin hntsgshyen serglvssts dsstncknav vndspekeaw psvpgsepel
      241 vsecmdadsa ssseserhit imasgsagge ndglrnstgl gsqnkfvvgs ssnnvghgss
      301 tgpwgfshga iistcqvsvd apesksessn nrmnawgtvs sssngglnps tlnsasnhga
      361 wpvlensgla lkgpvgsgss giniqcstlg qmpnnqsins kvggasthgt wgslqetces
      421 evsgtqkvsf sgqpqnitte mtgpnnttnf mtsslpnsgs vqnnelpsnt gawrvstmnh
      481 pqiqapsvvn gtslshlsng esksggsygt twgaygsnys gdkcsspngq angdtvnatl
      541 mqpgingpvg tnfqvntnkg ggvwesgavn sqsaswgnga nsggsrrgwg tpaqntgtni
      601 psvewnklps nqhsndsang ngkkftngwk steeedqgsa tsqtneqnsv waktggaves
      661 egstestgrl eekgtgenqs rdrrkmdqht llqsivnrtd ldprvlsnsg wgqtpikqnt
      721 awdtetsprg erktdngtea wgssatqtfn sgacvdktsp ssndtssvsg wgdpkpalrw
      781 gdskgsscqg gweddsaatg mvksnqwgnc keeksawnds qknkqgwgdg qksnqgwsvs
      841 asdnwgetsr snhwgeankk sssggsdsdr svsgwnelgk tssftwgnni npnnssgwde
      901 sskpnpsqgw gdppksnqsl gwgdsskpvs spdwnkqqdi vgswgippat gkppgtgwlg
      961 gpmpapakee eptgweepsp esirrkmeid dgtsawgdps kynyknvnmw nknvpngssr
     1021 sdqqaqvhql lpsagaisnk eassgsgwge pwgetstpat tvdngtsawg kpvdsgpswg
     1081 epiaaassts twgsssvgpq tlsksgpksm qdgwcgddmp lpgnrptgwe eeedveigmw
     1141 nsnssqelns slnwppytkk msskglsgkk rrrergmmkg gnkqeeawin pfvkqfsnis
     1201 fsrdspeenv qsnkmdlsgg mlqdkrmeid khslnigdyn rtvgkgpgsr pqiskessme
     1261 rnpyfdkngn psmfgvgnta aqprgmqqpp aqplsssqpn lraqvpppll spqvpvsllk
     1321 yapnngglnp lfgpqqvaml nqlsqlnqls qisqlqrlla qqqraqsqrs vpsgnrqqqd
     1381 qqgrplsvqq qmmqqsrqld pnllvkqqtp psqqqslhqp amksflenvm phttpelqkg
     1441 pspinafsnf piglnsnlnv nmdmssikep qsrlrkwttv dsisvntsld qnsskhgais
     1501 sgfrleespf vpydymnsst spasppgsig dgwprakspn gsssvnwppe frpgepwkgy
     1561 pnidpetdpy vtpgsvinnl sintvrevdh lrdrnsgsss slnttlpsts awssirasnh
     1621 svplsstaqs asarnsdskl twspgsvtnt slahelwkvp lppknitaps rpppgltgqk
     1681 pplsswdnsp lrvgggwgns darytpgssw gesssgritn wlvlknltpq idgstlrtlc
     1741 mqhgplitfh lnlphgnalv rysskeevvk aqkslhmcvl gnttilaefa seeeisrffa
     1801 qsqsltpsps wqslgssqsr lgsldcshsf ssrtdlnhwn gaglsgtncg dlhgtslwgt
     1861 phystslwgp psssdprgis spspinafls vdhlgggges m
//
LOCUS       XP_061009017            1893 aa            linear   MAM 02-DEC-2023
DEFINITION  trinucleotide repeat-containing gene 6A protein isoform X2 [Dama
            dama].
ACCESSION   XP_061009017
VERSION     XP_061009017.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153034.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1893
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1893
                     /product="trinucleotide repeat-containing gene 6A protein
                     isoform X2"
                     /calculated_mol_wt=202638
     Region          <479..>673
                     /region_name="ser_rich_anae_1"
                     /note="serine-rich protein; NF033849"
                     /db_xref="CDD:468206"
     Region          <602..>850
                     /region_name="ser_rich_anae_1"
                     /note="serine-rich protein; NF033849"
                     /db_xref="CDD:468206"
     Region          1055..1182
                     /region_name="Ago_hook"
                     /note="Argonaute hook; pfam10427"
                     /db_xref="CDD:463088"
     Region          <1260..1412
                     /region_name="M_domain"
                     /note="M domain of GW182; pfam12938"
                     /db_xref="CDD:432890"
     Region          1437..1698
                     /region_name="TNRC6-PABC_bdg"
                     /note="TNRC6-PABC binding domain; pfam16608"
                     /db_xref="CDD:465195"
     Region          1706..1797
                     /region_name="RRM_TNRC6A"
                     /note="RNA recognition motif (RRM) found in vertebrate
                     GW182 autoantigen; cd12711"
                     /db_xref="CDD:410110"
     CDS             1..1893
                     /gene="TNRC6A"
                     /coded_by="XM_061153034.1:77..5758"
                     /db_xref="GeneID:133063546"
ORIGIN      
        1 mteqqycttm dlvqeeeqlm eekkkkkddk kkkeaaqkka teqkikvpeq ikpsvsqpqp
       61 ansnngtsta tstnnnakra tannqqqqpq pqpqpqqhpq qppqpqpptq alpryprevp
      121 prfrhqehkq llkrgqhfpv iaanlgsavk vlssqsessa ltnqqpqnng evqisknqsd
      181 inhntsgshy enserglvss tsdsstnckn avvndspeke awpsvpgsep elvsecmdad
      241 sassseserh itimasgsag gendglrnst glgsqnkfvv gsssnnvghg sstgpwgfsh
      301 gaiistcqvs vdapeskses snnrmnawgt vssssnggln pstlnsasnh gawpvlensg
      361 lalkgpvgsg ssginiqcst lgqmpnnqsi nskvggasth gtwgslqetc esevsgtqkv
      421 sfsgqpqnit temtgpnntt nfmtsslpns gsvqnnelps ntgawrvstm nhpqiqapsv
      481 vngtslshls ngesksggsy gttwgaygsn ysgdkcsspn gqangdtvna tlmqpgingp
      541 vgtnfqvntn kgggvwesga vnsqsaswgn gansggsrrg wgtpaqntgt nipsvewnkl
      601 psnqhsndsa ngngkkftng wksteeedqg satsqtneqn svwaktggav esegstestg
      661 rleekgtgen qsrdrrkmdq htllqsivnr tdldprvlsn sgwgqtpikq ntawdtetsp
      721 rgerktdngt eawgssatqt fnsgacvdkt spssndtssv sgwgdpkpal rwgdskgssc
      781 qggweddsaa tgmvksnqwg nckeeksawn dsqknkqgwg dgqksnqgws vsasdnwget
      841 srsnhwgean kksssggsds drsvsgwnel gktssftwgn ninpnnssgw desskpnpsq
      901 gwgdppksnq slgwgdsskp vsspdwnkqq divgswgipp atgkppgtgw lggpmpapak
      961 eeeptgweep spesirrkme iddgtsawgd pskynyknvn mwnknvpngs srsdqqaqvh
     1021 qllpsagais nkeassgsgw gepwgetstp attvdngtsa wgkpvdsgps wgepiaaass
     1081 tstwgsssvg pqtlsksgpk smqdgwcgdd mplpgnrptg weeeedveig mwnsnssqel
     1141 nsslnwppyt kkmsskglsg kkrrrergmm kggnkqeeaw inpfvkqfsn isfsrdspee
     1201 nvqsnkmdls ggmlqdkrme idkhslnigd ynrtvgkgpg srpqiskess mernpyfdkn
     1261 gnpsmfgvgn taaqprgmqq ppaqplsssq pnlraqvppp llspqvpvsl lkyapnnggl
     1321 nplfgpqqva mlnqlsqlnq lsqisqlqrl laqqqraqsq rsvpsgnrqq qdqqgrplsv
     1381 qqqmmqqsrq ldpnllvkqq tppsqqqslh qpamksflen vmphttpelq kgpspinafs
     1441 nfpiglnsnl nvnmdmssik epqsrlrkwt tvdsisvnts ldqnsskhga issgfrlees
     1501 pfvpydymns stspasppgs igdgwpraks pngsssvnwp pefrpgepwk gypnidpetd
     1561 pyvtpgsvin nlsintvrev dhlrdrnsgs ssslnttlps tsawssiras nhsvplssta
     1621 qsasarnsds kltwspgsvt ntslahelwk vplppknita psrpppgltg qkpplsswdn
     1681 splrvgggwg nsdarytpgs swgesssgri tnwlvlknlt pqidgstlrt lcmqhgplit
     1741 fhlnlphgna lvrysskeev vkaqkslhmc vlgnttilae faseeeisrf faqsqsltps
     1801 pswqslgssq srlgsldcsh sfssrtdlnh wngaglsgtn cgdlhgtslw gtphystslw
     1861 gppsssdprg isspspinaf lsvdhlgggg esm
//
LOCUS       XP_061009018            1874 aa            linear   MAM 02-DEC-2023
DEFINITION  trinucleotide repeat-containing gene 6A protein isoform X3 [Dama
            dama].
ACCESSION   XP_061009018
VERSION     XP_061009018.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153035.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1874
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1874
                     /product="trinucleotide repeat-containing gene 6A protein
                     isoform X3"
                     /calculated_mol_wt=200336
     Region          <460..>654
                     /region_name="ser_rich_anae_1"
                     /note="serine-rich protein; NF033849"
                     /db_xref="CDD:468206"
     Region          <583..>831
                     /region_name="ser_rich_anae_1"
                     /note="serine-rich protein; NF033849"
                     /db_xref="CDD:468206"
     Region          1036..1127
                     /region_name="Ago_hook"
                     /note="Argonaute hook; pfam10427"
                     /db_xref="CDD:463088"
     Region          <1241..1393
                     /region_name="M_domain"
                     /note="M domain of GW182; pfam12938"
                     /db_xref="CDD:432890"
     Region          1418..1679
                     /region_name="TNRC6-PABC_bdg"
                     /note="TNRC6-PABC binding domain; pfam16608"
                     /db_xref="CDD:465195"
     Region          1687..1778
                     /region_name="RRM_TNRC6A"
                     /note="RNA recognition motif (RRM) found in vertebrate
                     GW182 autoantigen; cd12711"
                     /db_xref="CDD:410110"
     CDS             1..1874
                     /gene="TNRC6A"
                     /coded_by="XM_061153035.1:384..6008"
                     /db_xref="GeneID:133063546"
ORIGIN      
        1 meekkkkkdd kkkkeaaqkk ateqkikvpe qikpsvsqpq pansnngtst atstnnnakr
       61 atannqqqqp qpqpqpqqhp qqppqpqppt qalpryprev pprfrhqehk qllkrgqhfp
      121 viaanlgsav kvlssqsess altnqqpqnn gevqisknqs dinhntsgsh yenserglvs
      181 stsdsstnck navvndspek eawpsvpgse pelvsecmda dsassseser hitimasgsa
      241 ggendglrns tglgsqnkfv vgsssnnvgh gsstgpwgfs hgaiistcqv svdapeskse
      301 ssnnrmnawg tvssssnggl npstlnsasn hgawpvlens glalkgpvgs gssginiqcs
      361 tlgqmpnnqs inskvggast hgtwgslqet cesevsgtqk vsfsgqpqni ttemtgpnnt
      421 tnfmtsslpn sgsvqnnelp sntgawrvst mnhpqiqaps vvngtslshl sngesksggs
      481 ygttwgaygs nysgdkcssp ngqangdtvn atlmqpging pvgtnfqvnt nkgggvwesg
      541 avnsqsaswg ngansggsrr gwgtpaqntg tnipsvewnk lpsnqhsnds angngkkftn
      601 gwksteeedq gsatsqtneq nsvwaktgga vesegstest grleekgtge nqsrdrrkmd
      661 qhtllqsivn rtdldprvls nsgwgqtpik qntawdtets prgerktdng teawgssatq
      721 tfnsgacvdk tspssndtss vsgwgdpkpa lrwgdskgss cqggweddsa atgmvksnqw
      781 gnckeeksaw ndsqknkqgw gdgqksnqgw svsasdnwge tsrsnhwgea nkksssggsd
      841 sdrsvsgwne lgktssftwg nninpnnssg wdesskpnps qgwgdppksn qslgwgdssk
      901 pvsspdwnkq qdivgswgip patgkppgtg wlggpmpapa keeeptgwee pspesirrkm
      961 eiddgtsawg dpskynyknv nmwnknvpng ssrsdqqaqv hqllpsagai snkeassgsg
     1021 wgepwgetst pattvdngts awgkpvdsgp swgepiaaas ststwgsssv gpqtlsksgp
     1081 ksmqdgwcgd dmplpgnrpt gweeeedvei gmwnsnssqe lnsslnwppy tkkmsskgls
     1141 gkkrrrergm mkggnkqeea winpfvkqfs nisfsrdspe envqsnkmdl sggmlqdkrm
     1201 eidkhslnig dynrtvgkgp gsrpqiskes smernpyfdk ngnpsmfgvg ntaaqprgmq
     1261 qppaqplsss qpnlraqvpp pllspqvpvs llkyapnngg lnplfgpqqv amlnqlsqln
     1321 qlsqisqlqr llaqqqraqs qrsvpsgnrq qqdqqgrpls vqqqmmqqsr qldpnllvkq
     1381 qtppsqqqsl hqpamksfle nvmphttpel qkgpspinaf snfpiglnsn lnvnmdmssi
     1441 kepqsrlrkw ttvdsisvnt sldqnsskhg aissgfrlee spfvpydymn sstspasppg
     1501 sigdgwprak spngsssvnw ppefrpgepw kgypnidpet dpyvtpgsvi nnlsintvre
     1561 vdhlrdrnsg sssslnttlp stsawssira snhsvplsst aqsasarnsd skltwspgsv
     1621 tntslahelw kvplppknit apsrpppglt gqkpplsswd nsplrvgggw gnsdarytpg
     1681 sswgesssgr itnwlvlknl tpqidgstlr tlcmqhgpli tfhlnlphgn alvrysskee
     1741 vvkaqkslhm cvlgnttila efaseeeisr ffaqsqsltp spswqslgss qsrlgsldcs
     1801 hsfssrtdln hwngaglsgt ncgdlhgtsl wgtphystsl wgppsssdpr gisspspina
     1861 flsvdhlggg gesm
//
LOCUS       XP_061009019            1842 aa            linear   MAM 02-DEC-2023
DEFINITION  trinucleotide repeat-containing gene 6A protein isoform X4 [Dama
            dama].
ACCESSION   XP_061009019
VERSION     XP_061009019.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153036.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1842
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1842
                     /product="trinucleotide repeat-containing gene 6A protein
                     isoform X4"
                     /calculated_mol_wt=197673
     Region          <487..>681
                     /region_name="ser_rich_anae_1"
                     /note="serine-rich protein; NF033849"
                     /db_xref="CDD:468206"
     Region          <610..>858
                     /region_name="ser_rich_anae_1"
                     /note="serine-rich protein; NF033849"
                     /db_xref="CDD:468206"
     Region          <1209..1361
                     /region_name="M_domain"
                     /note="M domain of GW182; pfam12938"
                     /db_xref="CDD:432890"
     Region          1386..1647
                     /region_name="TNRC6-PABC_bdg"
                     /note="TNRC6-PABC binding domain; pfam16608"
                     /db_xref="CDD:465195"
     Region          1655..1746
                     /region_name="RRM_TNRC6A"
                     /note="RNA recognition motif (RRM) found in vertebrate
                     GW182 autoantigen; cd12711"
                     /db_xref="CDD:410110"
     CDS             1..1842
                     /gene="TNRC6A"
                     /coded_by="XM_061153036.1:165..5693"
                     /db_xref="GeneID:133063546"
ORIGIN      
        1 mreleakatk dvernlsrdl vqeeeqlmee kkkkkddkkk keaaqkkate qkikvpeqik
       61 psvsqpqpan snngtstats tnnnakrata nnqqqqpqpq pqpqqhpqqp pqpqpptqal
      121 pryprevppr frhqehkqll krgqhfpvia anlgsavkvl ssqsessalt nqqpqnngev
      181 qisknqsdin hntsgshyen serglvssts dsstncknav vndspekeaw psvpgsepel
      241 vsecmdadsa ssseserhit imasgsagge ndglrnstgl gsqnkfvvgs ssnnvghgss
      301 tgpwgfshga iistcqvsvd apesksessn nrmnawgtvs sssngglnps tlnsasnhga
      361 wpvlensgla lkgpvgsgss giniqcstlg qmpnnqsins kvggasthgt wgslqetces
      421 evsgtqkvsf sgqpqnitte mtgpnnttnf mtsslpnsgs vqnnelpsnt gawrvstmnh
      481 pqiqapsvvn gtslshlsng esksggsygt twgaygsnys gdkcsspngq angdtvnatl
      541 mqpgingpvg tnfqvntnkg ggvwesgavn sqsaswgnga nsggsrrgwg tpaqntgtni
      601 psvewnklps nqhsndsang ngkkftngwk steeedqgsa tsqtneqnsv waktggaves
      661 egstestgrl eekgtgenqs rdrrkmdqht llqsivnrtd ldprvlsnsg wgqtpikqnt
      721 awdtetsprg erktdngtea wgssatqtfn sgacvdktsp ssndtssvsg wgdpkpalrw
      781 gdskgsscqg gweddsaatg mvksnqwgnc keeksawnds qknkqgwgdg qksnqgwsvs
      841 asdnwgetsr snhwgeankk sssggsdsdr svsgwnelgk tssftwgnni npnnssgwde
      901 sskpnpsqgw gdppksnqsl gwgdsskpvs spdwnkqqdi vgswgippat gkppgtgwlg
      961 gpmpapakee eptgweepsp esirrkmeid dgtsawgdps kynyknvnmw nknvpngssr
     1021 sdqqaqvhql lpsagaisnk eassgsgpks mqdgwcgddm plpgnrptgw eeeedveigm
     1081 wnsnssqeln sslnwppytk kmsskglsgk krrrergmmk ggnkqeeawi npfvkqfsni
     1141 sfsrdspeen vqsnkmdlsg gmlqdkrmei dkhslnigdy nrtvgkgpgs rpqiskessm
     1201 ernpyfdkng npsmfgvgnt aaqprgmqqp paqplsssqp nlraqvpppl lspqvpvsll
     1261 kyapnnggln plfgpqqvam lnqlsqlnql sqisqlqrll aqqqraqsqr svpsgnrqqq
     1321 dqqgrplsvq qqmmqqsrql dpnllvkqqt ppsqqqslhq pamksflenv mphttpelqk
     1381 gpspinafsn fpiglnsnln vnmdmssike pqsrlrkwtt vdsisvntsl dqnsskhgai
     1441 ssgfrleesp fvpydymnss tspasppgsi gdgwpraksp ngsssvnwpp efrpgepwkg
     1501 ypnidpetdp yvtpgsvinn lsintvrevd hlrdrnsgss sslnttlpst sawssirasn
     1561 hsvplsstaq sasarnsdsk ltwspgsvtn tslahelwkv plppknitap srpppgltgq
     1621 kpplsswdns plrvgggwgn sdarytpgss wgesssgrit nwlvlknltp qidgstlrtl
     1681 cmqhgplitf hlnlphgnal vrysskeevv kaqkslhmcv lgnttilaef aseeeisrff
     1741 aqsqsltpsp swqslgssqs rlgsldcshs fssrtdlnhw ngaglsgtnc gdlhgtslwg
     1801 tphystslwg ppsssdprgi sspspinafl svdhlgggge sm
//
LOCUS       XP_061009021            1768 aa            linear   MAM 02-DEC-2023
DEFINITION  trinucleotide repeat-containing gene 6A protein isoform X5 [Dama
            dama].
ACCESSION   XP_061009021
VERSION     XP_061009021.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153038.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1768
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1768
                     /product="trinucleotide repeat-containing gene 6A protein
                     isoform X5"
                     /calculated_mol_wt=188943
     Region          <354..>548
                     /region_name="ser_rich_anae_1"
                     /note="serine-rich protein; NF033849"
                     /db_xref="CDD:468206"
     Region          <477..>725
                     /region_name="ser_rich_anae_1"
                     /note="serine-rich protein; NF033849"
                     /db_xref="CDD:468206"
     Region          930..1021
                     /region_name="Ago_hook"
                     /note="Argonaute hook; pfam10427"
                     /db_xref="CDD:463088"
     Region          <1135..1287
                     /region_name="M_domain"
                     /note="M domain of GW182; pfam12938"
                     /db_xref="CDD:432890"
     Region          1312..1573
                     /region_name="TNRC6-PABC_bdg"
                     /note="TNRC6-PABC binding domain; pfam16608"
                     /db_xref="CDD:465195"
     Region          1581..1672
                     /region_name="RRM_TNRC6A"
                     /note="RNA recognition motif (RRM) found in vertebrate
                     GW182 autoantigen; cd12711"
                     /db_xref="CDD:410110"
     CDS             1..1768
                     /gene="TNRC6A"
                     /coded_by="XM_061153038.1:164..5470"
                     /db_xref="GeneID:133063546"
ORIGIN      
        1 mreleakatk dvernlsrdl vqeeeqlmee kkkkkddkkk keaaqkkate qkikdinhnt
       61 sgshyenser glvsstsdss tncknavvnd spekeawpsv pgsepelvse cmdadsasss
      121 eserhitima sgsaggendg lrnstglgsq nkfvvgsssn nvghgsstgp wgfshgaiis
      181 tcqvsvdape sksessnnrm nawgtvssss ngglnpstln sasnhgawpv lensglalkg
      241 pvgsgssgin iqcstlgqmp nnqsinskvg gasthgtwgs lqetcesevs gtqkvsfsgq
      301 pqnittemtg pnnttnfmts slpnsgsvqn nelpsntgaw rvstmnhpqi qapsvvngts
      361 lshlsngesk sggsygttwg aygsnysgdk csspngqang dtvnatlmqp gingpvgtnf
      421 qvntnkgggv wesgavnsqs aswgngansg gsrrgwgtpa qntgtnipsv ewnklpsnqh
      481 sndsangngk kftngwkste eedqgsatsq tneqnsvwak tggavesegs testgrleek
      541 gtgenqsrdr rkmdqhtllq sivnrtdldp rvlsnsgwgq tpikqntawd tetsprgerk
      601 tdngteawgs satqtfnsga cvdktspssn dtssvsgwgd pkpalrwgds kgsscqggwe
      661 ddsaatgmvk snqwgnckee ksawndsqkn kqgwgdgqks nqgwsvsasd nwgetsrsnh
      721 wgeankksss ggsdsdrsvs gwnelgktss ftwgnninpn nssgwdessk pnpsqgwgdp
      781 pksnqslgwg dsskpvsspd wnkqqdivgs wgippatgkp pgtgwlggpm papakeeept
      841 gweepspesi rrkmeiddgt sawgdpskyn yknvnmwnkn vpngssrsdq qaqvhqllps
      901 agaisnkeas sgsgwgepwg etstpattvd ngtsawgkpv dsgpswgepi aaasststwg
      961 sssvgpqtls ksgpksmqdg wcgddmplpg nrptgweeee dveigmwnsn ssqelnssln
     1021 wppytkkmss kglsgkkrrr ergmmkggnk qeeawinpfv kqfsnisfsr dspeenvqsn
     1081 kmdlsggmlq dkrmeidkhs lnigdynrtv gkgpgsrpqi skessmernp yfdkngnpsm
     1141 fgvgntaaqp rgmqqppaqp lsssqpnlra qvpppllspq vpvsllkyap nngglnplfg
     1201 pqqvamlnql sqlnqlsqis qlqrllaqqq raqsqrsvps gnrqqqdqqg rplsvqqqmm
     1261 qqsrqldpnl lvkqqtppsq qqslhqpamk sflenvmpht tpelqkgpsp inafsnfpig
     1321 lnsnlnvnmd mssikepqsr lrkwttvdsi svntsldqns skhgaissgf rleespfvpy
     1381 dymnsstspa sppgsigdgw prakspngss svnwppefrp gepwkgypni dpetdpyvtp
     1441 gsvinnlsin tvrevdhlrd rnsgssssln ttlpstsaws sirasnhsvp lsstaqsasa
     1501 rnsdskltws pgsvtntsla helwkvplpp knitapsrpp pgltgqkppl sswdnsplrv
     1561 gggwgnsdar ytpgsswges ssgritnwlv lknltpqidg stlrtlcmqh gplitfhlnl
     1621 phgnalvrys skeevvkaqk slhmcvlgnt tilaefasee eisrffaqsq sltpspswqs
     1681 lgssqsrlgs ldcshsfssr tdlnhwngag lsgtncgdlh gtslwgtphy stslwgppss
     1741 sdprgissps pinaflsvdh lggggesm
//
LOCUS       XP_061009022            1950 aa            linear   MAM 02-DEC-2023
DEFINITION  trinucleotide repeat-containing gene 6A protein isoform X6 [Dama
            dama].
ACCESSION   XP_061009022
VERSION     XP_061009022.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153039.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1950
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1950
                     /product="trinucleotide repeat-containing gene 6A protein
                     isoform X6"
                     /calculated_mol_wt=208695
     Region          <487..>681
                     /region_name="ser_rich_anae_1"
                     /note="serine-rich protein; NF033849"
                     /db_xref="CDD:468206"
     Region          <610..>858
                     /region_name="ser_rich_anae_1"
                     /note="serine-rich protein; NF033849"
                     /db_xref="CDD:468206"
     Region          1063..1190
                     /region_name="Ago_hook"
                     /note="Argonaute hook; pfam10427"
                     /db_xref="CDD:463088"
     Region          1283..1469
                     /region_name="M_domain"
                     /note="M domain of GW182; pfam12938"
                     /db_xref="CDD:432890"
     Region          1494..1755
                     /region_name="TNRC6-PABC_bdg"
                     /note="TNRC6-PABC binding domain; pfam16608"
                     /db_xref="CDD:465195"
     Region          1763..1854
                     /region_name="RRM_TNRC6A"
                     /note="RNA recognition motif (RRM) found in vertebrate
                     GW182 autoantigen; cd12711"
                     /db_xref="CDD:410110"
     CDS             1..1950
                     /gene="TNRC6A"
                     /coded_by="XM_061153039.1:166..6018"
                     /db_xref="GeneID:133063546"
ORIGIN      
        1 mreleakatk dvernlsrdl vqeeeqlmee kkkkkddkkk keaaqkkate qkikvpeqik
       61 psvsqpqpan snngtstats tnnnakrata nnqqqqpqpq pqpqqhpqqp pqpqpptqal
      121 pryprevppr frhqehkqll krgqhfpvia anlgsavkvl ssqsessalt nqqpqnngev
      181 qisknqsdin hntsgshyen serglvssts dsstncknav vndspekeaw psvpgsepel
      241 vsecmdadsa ssseserhit imasgsagge ndglrnstgl gsqnkfvvgs ssnnvghgss
      301 tgpwgfshga iistcqvsvd apesksessn nrmnawgtvs sssngglnps tlnsasnhga
      361 wpvlensgla lkgpvgsgss giniqcstlg qmpnnqsins kvggasthgt wgslqetces
      421 evsgtqkvsf sgqpqnitte mtgpnnttnf mtsslpnsgs vqnnelpsnt gawrvstmnh
      481 pqiqapsvvn gtslshlsng esksggsygt twgaygsnys gdkcsspngq angdtvnatl
      541 mqpgingpvg tnfqvntnkg ggvwesgavn sqsaswgnga nsggsrrgwg tpaqntgtni
      601 psvewnklps nqhsndsang ngkkftngwk steeedqgsa tsqtneqnsv waktggaves
      661 egstestgrl eekgtgenqs rdrrkmdqht llqsivnrtd ldprvlsnsg wgqtpikqnt
      721 awdtetsprg erktdngtea wgssatqtfn sgacvdktsp ssndtssvsg wgdpkpalrw
      781 gdskgsscqg gweddsaatg mvksnqwgnc keeksawnds qknkqgwgdg qksnqgwsvs
      841 asdnwgetsr snhwgeankk sssggsdsdr svsgwnelgk tssftwgnni npnnssgwde
      901 sskpnpsqgw gdppksnqsl gwgdsskpvs spdwnkqqdi vgswgippat gkppgtgwlg
      961 gpmpapakee eptgweepsp esirrkmeid dgtsawgdps kynyknvnmw nknvpngssr
     1021 sdqqaqvhql lpsagaisnk eassgsgwge pwgetstpat tvdngtsawg kpvdsgpswg
     1081 epiaaassts twgsssvgpq tlsksgpksm qdgwcgddmp lpgnrptgwe eeedveigmw
     1141 nsnssqelns slnwppytkk msskglsgkk rrrergmmkg gnkqeeawin pfvkqfsnis
     1201 fsrdspeenv qsnkmdlsgg mlqdkrmeid khslnigdyn rtvgkgpgsr pqiskessme
     1261 rnpyfdkdgi vadesqnmqf mssqsmklpp snsalpnqal gsiaglgmqn lnsvrqngnp
     1321 smfgvgntaa qprgmqqppa qplsssqpnl raqvppplls pqvpvsllky apnngglnpl
     1381 fgpqqvamln qlsqlnqlsq isqlqrllaq qqraqsqrsv psgnrqqqdq qgrplsvqqq
     1441 mmqqsrqldp nllvkqqtpp sqqqslhqpa mksflenvmp httpelqkgp spinafsnfp
     1501 iglnsnlnvn mdmssikepq srlrkwttvd sisvntsldq nsskhgaiss gfrleespfv
     1561 pydymnssts pasppgsigd gwprakspng sssvnwppef rpgepwkgyp nidpetdpyv
     1621 tpgsvinnls intvrevdhl rdrnsgssss lnttlpstsa wssirasnhs vplsstaqsa
     1681 sarnsdsklt wspgsvtnts lahelwkvpl ppknitapsr pppgltgqkp plsswdnspl
     1741 rvgggwgnsd arytpgsswg esssgritnw lvlknltpqi dgstlrtlcm qhgplitfhl
     1801 nlphgnalvr ysskeevvka qkslhmcvlg nttilaefas eeeisrffaq sqsltpspsw
     1861 qslgssqsrl gsldcshsfs srtdlnhwng aglsgtncgd lhgtslwgtp hystslwgpp
     1921 sssdprgiss pspinaflsv dhlggggesm
//
LOCUS       XP_061009023             674 aa            linear   MAM 02-DEC-2023
DEFINITION  sodium/myo-inositol cotransporter 2 isoform X1 [Dama dama].
ACCESSION   XP_061009023
VERSION     XP_061009023.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153040.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..674
                     /product="sodium/myo-inositol cotransporter 2 isoform X1"
                     /calculated_mol_wt=73874
     Region          28..674
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
     Site            order(76,79,384,387..388)
                     /site_type="other"
                     /note="Na binding site [ion binding]"
                     /db_xref="CDD:271356"
     CDS             1..674
                     /gene="SLC5A11"
                     /coded_by="XM_061153040.1:309..2333"
                     /db_xref="GeneID:133063547"
ORIGIN      
        1 messtssppp tqsdpleaft rrtleagdia vlilyflfvl avglwstvkt krdtvkgyfl
       61 aggnmlwwpv gaslfasnvg sghfvglags gaaaglsvta yelnglffvl mlswiflpiy
      121 itgqvttmpe ylwkrfggnr ipiilavlyl fiyiftkisv dmyagaifiq qslhvnlyla
      181 vvgllavtal ytiagglaav iytdalqtli mligalilmg ysfaavggle gleekyflam
      241 asnrsgnssc glpredafhi frdpvtsdlp wpgilfgmsi pslwywctdq vivqrtlaak
      301 nlshakggsl maaylkvlpl fimvfpgmvs rvlfpdevac adpeicrevc snpagcsdia
      361 ypklvlellp tglrglmmav mvaaltsslt sifnsastif tmdlwnhlrp rasekelmiv
      421 grvfvlllvl vsilwipvvq asqggqlfiy iqsissylqp pvavvfimgc fwkranekga
      481 ffglvlglll glvrlildfi yvqprcdqld erpavvkdvh ylyfsmilss vtlitvcavs
      541 wfteppskem vsrltwftrh dpvvqkeqvp satpppltls hngtpeasgt niqfemvqen
      601 mskthscdmt tkrskvvkai lwlcgmenkg kepapsradp vivsleenpl vktlldlsli
      661 iciscaiflw gyfa
//
LOCUS       XP_061009024             650 aa            linear   MAM 02-DEC-2023
DEFINITION  sodium/myo-inositol cotransporter 2 isoform X2 [Dama dama].
ACCESSION   XP_061009024
VERSION     XP_061009024.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153041.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..650
                     /product="sodium/myo-inositol cotransporter 2 isoform X2"
                     /calculated_mol_wt=71136
     Region          28..650
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
     Site            order(52,55,360,363..364)
                     /site_type="other"
                     /note="Na binding site [ion binding]"
                     /db_xref="CDD:271356"
     CDS             1..650
                     /gene="SLC5A11"
                     /coded_by="XM_061153041.1:310..2262"
                     /db_xref="GeneID:133063547"
ORIGIN      
        1 messtssppp tqsdpleaft rrtleagdia vlilyflfvl avglwvgasl fasnvgsghf
       61 vglagsgaaa glsvtayeln glffvlmlsw iflpiyitgq vttmpeylwk rfggnripii
      121 lavlylfiyi ftkisvdmya gaifiqqslh vnlylavvgl lavtalytia gglaaviytd
      181 alqtlimlig alilmgysfa avggleglee kyflamasnr sgnsscglpr edafhifrdp
      241 vtsdlpwpgi lfgmsipslw ywctdqvivq rtlaaknlsh akggslmaay lkvlplfimv
      301 fpgmvsrvlf pdevacadpe icrevcsnpa gcsdiaypkl vlellptglr glmmavmvaa
      361 ltssltsifn sastiftmdl wnhlrprase kelmivgrvf vlllvlvsil wipvvqasqg
      421 gqlfiyiqsi ssylqppvav vfimgcfwkr anekgaffgl vlglllglvr lildfiyvqp
      481 rcdqlderpa vvkdvhylyf smilssvtli tvcavswfte ppskemvsrl twftrhdpvv
      541 qkeqvpsatp ppltlshngt peasgtniqf emvqenmskt hscdmttkrs kvvkailwlc
      601 gmenkgkepa psradpvivs leenplvktl ldlsliicis caiflwgyfa
//
LOCUS       XP_061009025             639 aa            linear   MAM 02-DEC-2023
DEFINITION  sodium/myo-inositol cotransporter 2 isoform X3 [Dama dama].
ACCESSION   XP_061009025
VERSION     XP_061009025.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153042.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..639
                     /product="sodium/myo-inositol cotransporter 2 isoform X3"
                     /calculated_mol_wt=69870
     Region          28..639
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
     Site            order(76,79,384,387..388)
                     /site_type="other"
                     /note="Na binding site [ion binding]"
                     /db_xref="CDD:271356"
     CDS             1..639
                     /gene="SLC5A11"
                     /coded_by="XM_061153042.1:311..2230"
                     /db_xref="GeneID:133063547"
ORIGIN      
        1 messtssppp tqsdpleaft rrtleagdia vlilyflfvl avglwstvkt krdtvkgyfl
       61 aggnmlwwpv gaslfasnvg sghfvglags gaaaglsvta yelnglffvl mlswiflpiy
      121 itgqvttmpe ylwkrfggnr ipiilavlyl fiyiftkisv dmyagaifiq qslhvnlyla
      181 vvgllavtal ytiagglaav iytdalqtli mligalilmg ysfaavggle gleekyflam
      241 asnrsgnssc glpredafhi frdpvtsdlp wpgilfgmsi pslwywctdq vivqrtlaak
      301 nlshakggsl maaylkvlpl fimvfpgmvs rvlfpdevac adpeicrevc snpagcsdia
      361 ypklvlellp tglrglmmav mvaaltsslt sifnsastif tmdlwnhlrp rasekelmiv
      421 grvfvlllvl vsilwipvvq asqggqlfiy iqsissylqp pvavvfimgc fwkranekga
      481 ffglvlglll glvrlildfi yvqprcdqld erpavvsrlt wftrhdpvvq keqvpsatpp
      541 pltlshngtp easgtniqfe mvqenmskth scdmttkrsk vvkailwlcg menkgkepap
      601 sradpvivsl eenplvktll dlsliicisc aiflwgyfa
//
LOCUS       XP_061009026             619 aa            linear   MAM 02-DEC-2023
DEFINITION  sodium/myo-inositol cotransporter 2 isoform X4 [Dama dama].
ACCESSION   XP_061009026
VERSION     XP_061009026.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153043.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..619
                     /product="sodium/myo-inositol cotransporter 2 isoform X4"
                     /calculated_mol_wt=68299
     Region          28..619
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
     CDS             1..619
                     /gene="SLC5A11"
                     /coded_by="XM_061153043.1:310..2169"
                     /db_xref="GeneID:133063547"
ORIGIN      
        1 messtssppp tqsdpleaft rrtleagdia vlilyflfvl avglwstvkt krdtvkgyfl
       61 aggnmlwwpv ttmpeylwkr fggnripiil avlylfiyif tkisvdmyag aifiqqslhv
      121 nlylavvgll avtalytiag glaaviytda lqtlimliga lilmgysfaa vgglegleek
      181 yflamasnrs gnsscglpre dafhifrdpv tsdlpwpgil fgmsipslwy wctdqvivqr
      241 tlaaknlsha kggslmaayl kvlplfimvf pgmvsrvlfp devacadpei crevcsnpag
      301 csdiaypklv lellptglrg lmmavmvaal tssltsifns astiftmdlw nhlrprasek
      361 elmivgrvfv lllvlvsilw ipvvqasqgg qlfiyiqsis sylqppvavv fimgcfwkra
      421 nekgaffglv lglllglvrl ildfiyvqpr cdqlderpav vkdvhylyfs milssvtlit
      481 vcavswftep pskemvsrlt wftrhdpvvq keqvpsatpp pltlshngtp easgtniqfe
      541 mvqenmskth scdmttkrsk vvkailwlcg menkgkepap sradpvivsl eenplvktll
      601 dlsliicisc aiflwgyfa
//
LOCUS       XP_061009027             874 aa            linear   MAM 02-DEC-2023
DEFINITION  rho GTPase-activating protein 17 isoform X1 [Dama dama].
ACCESSION   XP_061009027
VERSION     XP_061009027.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153044.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..874
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..874
                     /product="rho GTPase-activating protein 17 isoform X1"
                     /calculated_mol_wt=93715
     Region          13..257
                     /region_name="BAR_Rich1"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of RhoGAP
                     interacting with CIP4 homologs protein 1; cd07618"
                     /db_xref="CDD:153302"
     Site            order(21,24..25,32,34..35,38..39,41..42,70..71,73..74,
                     77..78,80..81,84,97,100..101,199,202..203,205,209,
                     212..213,215..216,219..220,223..224,226..227,230..231,
                     233..234)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153302"
     Region          246..446
                     /region_name="RhoGAP_nadrin"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain of Nadrin-like proteins. Nadrin,
                     also named Rich-1, has been shown to be involved in the
                     regulation of Ca2+-dependent exocytosis in neurons and
                     recently has been implicated in...; cd04386"
                     /db_xref="CDD:239851"
     Site            order(288,325,329,398,401..402,428)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239851"
     Site            288
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239851"
     Region          <520..706
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..874
                     /gene="ARHGAP17"
                     /coded_by="XM_061153044.1:95..2719"
                     /db_xref="GeneID:133063549"
ORIGIN      
        1 mkkqfnrmkq lanqtvgrae ktevlsedll qierrldtvr smchhshkrl macfqgqhgt
       61 daerrhkklp ltalaqnmqe astqledsll gkmletcgda enqlalelsq hevfvekeiv
      121 dplygiaeve ipniqkqrkq laklvldwds vrarwnqahk ssgtnfqglp skidtlkeem
      181 deagnkveqc kdqlaadmyn fmakegeygk ffvtlleaqa dyhrkalavl ekalpelrah
      241 qdkwaekpaf gtpleehlkr sgreialpie acvmllletg mkeeglfrig agasklkklk
      301 aaldcstshl defysdphav agalksylre lpeplmtfnl yeewtqvasv qdqdkklqdl
      361 wrtcqklppq nfvnfrylik flaklaqtsd inkmtpsnia ivlgpnllwa knegtlaema
      421 aatsvhvvav iepiiqhanw ffpeevefnv seafvplttp nsnhsshtgn dpvdsgtler
      481 krpasmavme gdlvkkesfg vklmdfqahr rggtlnrkha spafqpplpp tdgstlapag
      541 pepppqssra esstgggtgp ssagileqgp spgdgsppkp kdsvaapapg rnssqappgp
      601 sqapaaagsh qlsvgpahns agpsphtvrr avkkpapapp kpgnpppshp ggqsspgasq
      661 hppslspkps trspspptqp pgqapgqpca tsqlsaprry ssslppiqap shpppqpptq
      721 aappaaltkp gsqgppapga pgepgleqss htppqtptpp stpplgkqnp gqavsnpeta
      781 qphagtlprp rpvpkprnrp nvpppphppg ahpagdgnls iaaptaskvv tdansrvsep
      841 lrsifpemhs dsaskdvpgr illdmdndte stal
//
LOCUS       XP_061009028             846 aa            linear   MAM 02-DEC-2023
DEFINITION  rho GTPase-activating protein 17 isoform X2 [Dama dama].
ACCESSION   XP_061009028
VERSION     XP_061009028.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153045.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..846
                     /product="rho GTPase-activating protein 17 isoform X2"
                     /calculated_mol_wt=90489
     Region          13..257
                     /region_name="BAR_Rich1"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of RhoGAP
                     interacting with CIP4 homologs protein 1; cd07618"
                     /db_xref="CDD:153302"
     Site            order(21,24..25,32,34..35,38..39,41..42,70..71,73..74,
                     77..78,80..81,84,97,100..101,199,202..203,205,209,
                     212..213,215..216,219..220,223..224,226..227,230..231,
                     233..234)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153302"
     Region          246..446
                     /region_name="RhoGAP_nadrin"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain of Nadrin-like proteins. Nadrin,
                     also named Rich-1, has been shown to be involved in the
                     regulation of Ca2+-dependent exocytosis in neurons and
                     recently has been implicated in...; cd04386"
                     /db_xref="CDD:239851"
     Site            order(288,325,329,398,401..402,428)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239851"
     Site            288
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239851"
     Region          517..>703
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..846
                     /gene="ARHGAP17"
                     /coded_by="XM_061153045.1:95..2635"
                     /db_xref="GeneID:133063549"
ORIGIN      
        1 mkkqfnrmkq lanqtvgrae ktevlsedll qierrldtvr smchhshkrl macfqgqhgt
       61 daerrhkklp ltalaqnmqe astqledsll gkmletcgda enqlalelsq hevfvekeiv
      121 dplygiaeve ipniqkqrkq laklvldwds vrarwnqahk ssgtnfqglp skidtlkeem
      181 deagnkveqc kdqlaadmyn fmakegeygk ffvtlleaqa dyhrkalavl ekalpelrah
      241 qdkwaekpaf gtpleehlkr sgreialpie acvmllletg mkeeglfrig agasklkklk
      301 aaldcstshl defysdphav agalksylre lpeplmtfnl yeewtqvasv qdqdkklqdl
      361 wrtcqklppq nfvnfrylik flaklaqtsd inkmtpsnia ivlgpnllwa knegtlaema
      421 aatsvhvvav iepiiqhanw ffpeevefnv seafvplttp nsnhsshtgn dpvdsgtler
      481 krpasmavme gdlvkkesfg vklmdfqahr rggtlnrkha spafqpplpp tdgstlapag
      541 pepppqssra esstgggtgp ssagileqgp spgdgsppkp kdsvaapapg rnssqappgp
      601 sqapaaagsh qlsvgpahns agpsphtvrr avkkpapapp kpgnpppshp ggqsspgasq
      661 hppslspkps trspspptqp pgqapgqpca tsqlsaprry ssslppiqap shpppqpptq
      721 aappaaltkp gsqgppapga pgepgleqss htppqtptpp stpplgkqnp gqavsnpeta
      781 qphagtlprp rpvpkprnrp nvpppphppg ahpagdgnls iaaptaskvv tdalpsaltg
      841 gegfqe
//
LOCUS       XP_061009030             833 aa            linear   MAM 02-DEC-2023
DEFINITION  rho GTPase-activating protein 17 isoform X3 [Dama dama].
ACCESSION   XP_061009030
VERSION     XP_061009030.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153047.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..833
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..833
                     /product="rho GTPase-activating protein 17 isoform X3"
                     /calculated_mol_wt=89229
     Region          13..257
                     /region_name="BAR_Rich1"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of RhoGAP
                     interacting with CIP4 homologs protein 1; cd07618"
                     /db_xref="CDD:153302"
     Site            order(21,24..25,32,34..35,38..39,41..42,70..71,73..74,
                     77..78,80..81,84,97,100..101,199,202..203,205,209,
                     212..213,215..216,219..220,223..224,226..227,230..231,
                     233..234)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153302"
     Region          246..446
                     /region_name="RhoGAP_nadrin"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain of Nadrin-like proteins. Nadrin,
                     also named Rich-1, has been shown to be involved in the
                     regulation of Ca2+-dependent exocytosis in neurons and
                     recently has been implicated in...; cd04386"
                     /db_xref="CDD:239851"
     Site            order(288,325,329,398,401..402,428)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239851"
     Site            288
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239851"
     Region          <520..706
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..833
                     /gene="ARHGAP17"
                     /coded_by="XM_061153047.1:95..2596"
                     /db_xref="GeneID:133063549"
ORIGIN      
        1 mkkqfnrmkq lanqtvgrae ktevlsedll qierrldtvr smchhshkrl macfqgqhgt
       61 daerrhkklp ltalaqnmqe astqledsll gkmletcgda enqlalelsq hevfvekeiv
      121 dplygiaeve ipniqkqrkq laklvldwds vrarwnqahk ssgtnfqglp skidtlkeem
      181 deagnkveqc kdqlaadmyn fmakegeygk ffvtlleaqa dyhrkalavl ekalpelrah
      241 qdkwaekpaf gtpleehlkr sgreialpie acvmllletg mkeeglfrig agasklkklk
      301 aaldcstshl defysdphav agalksylre lpeplmtfnl yeewtqvasv qdqdkklqdl
      361 wrtcqklppq nfvnfrylik flaklaqtsd inkmtpsnia ivlgpnllwa knegtlaema
      421 aatsvhvvav iepiiqhanw ffpeevefnv seafvplttp nsnhsshtgn dpvdsgtler
      481 krpasmavme gdlvkkesfg vklmdfqahr rggtlnrkha spafqpplpp tdgstlapag
      541 pepppqssra esstgggtgp ssagileqgp spgdgsppkp kdsvaapapg rnssqappgp
      601 sqapaaagsh qlsvgpahns agpsphtvrr avkkpapapp kpgnpppshp ggqsspgasq
      661 hppslspkps trspspptqp pgqapgqpca tsqlsaprry ssslppiqap shpppqpptq
      721 aappaaltkp gsqgppapga pgepgleqss htppqtptpp stpplgkqnp gqavsnpeta
      781 qphagtlprp rpvpkprnrp nvpppphppg ahpagdgnls iaaptaskvv tdv
//
LOCUS       XP_061009031             796 aa            linear   MAM 02-DEC-2023
DEFINITION  rho GTPase-activating protein 17 isoform X4 [Dama dama].
ACCESSION   XP_061009031
VERSION     XP_061009031.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153048.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..796
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..796
                     /product="rho GTPase-activating protein 17 isoform X4"
                     /calculated_mol_wt=85972
     Region          13..257
                     /region_name="BAR_Rich1"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of RhoGAP
                     interacting with CIP4 homologs protein 1; cd07618"
                     /db_xref="CDD:153302"
     Site            order(21,24..25,32,34..35,38..39,41..42,70..71,73..74,
                     77..78,80..81,84,97,100..101,199,202..203,205,209,
                     212..213,215..216,219..220,223..224,226..227,230..231,
                     233..234)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153302"
     Region          246..446
                     /region_name="RhoGAP_nadrin"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain of Nadrin-like proteins. Nadrin,
                     also named Rich-1, has been shown to be involved in the
                     regulation of Ca2+-dependent exocytosis in neurons and
                     recently has been implicated in...; cd04386"
                     /db_xref="CDD:239851"
     Site            order(288,325,329,398,401..402,428)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239851"
     Site            288
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239851"
     Region          <505..>620
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     CDS             1..796
                     /gene="ARHGAP17"
                     /coded_by="XM_061153048.1:95..2485"
                     /db_xref="GeneID:133063549"
ORIGIN      
        1 mkkqfnrmkq lanqtvgrae ktevlsedll qierrldtvr smchhshkrl macfqgqhgt
       61 daerrhkklp ltalaqnmqe astqledsll gkmletcgda enqlalelsq hevfvekeiv
      121 dplygiaeve ipniqkqrkq laklvldwds vrarwnqahk ssgtnfqglp skidtlkeem
      181 deagnkveqc kdqlaadmyn fmakegeygk ffvtlleaqa dyhrkalavl ekalpelrah
      241 qdkwaekpaf gtpleehlkr sgreialpie acvmllletg mkeeglfrig agasklkklk
      301 aaldcstshl defysdphav agalksylre lpeplmtfnl yeewtqvasv qdqdkklqdl
      361 wrtcqklppq nfvnfrylik flaklaqtsd inkmtpsnia ivlgpnllwa knegtlaema
      421 aatsvhvvav iepiiqhanw ffpeevefnv seafvplttp nsnhsshtgn dpvdsgtler
      481 krpasmavme gdlvkkespp kpkdsvaapa pgrnssqapp gpsqapaaag shqlsvgpah
      541 nsagpsphtv rravkkpapa ppkpgnppps hpggqsspga sqhppslspk pstrspsppt
      601 qppgqapgqp catsqlsapr ryssslppiq apshpppqpp tqaappaalt kpgsqgppap
      661 gapgepgleq sshtppqtpt ppstpplgkq npgqavsnpe taqphagtlp rprpvpkprn
      721 rpnvpppphp pgahpagdgn lsiaaptask vvtdansrvs eplrsifpem hsdsaskdvp
      781 grilldmdnd testal
//
LOCUS       XP_061009032             332 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine carboxyl methyltransferase 1 [Dama dama].
ACCESSION   XP_061009032
VERSION     XP_061009032.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153049.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..332
                     /product="leucine carboxyl methyltransferase 1"
                     /calculated_mol_wt=37979
     Region          24..215
                     /region_name="LCM"
                     /note="Leucine carboxyl methyltransferase; pfam04072"
                     /db_xref="CDD:427692"
     CDS             1..332
                     /gene="LCMT1"
                     /coded_by="XM_061153049.1:124..1122"
                     /db_xref="GeneID:133063550"
ORIGIN      
        1 maaslrrpsf ttcssptdtd degvrgtced asickrfavs igywqdpyiq hlvrlskerk
       61 apeinrgyfa rvhgvsqltk aflrktecnc qilnlgagmd ttfwtlkded llprkyfeid
      121 fpmivtrklh siklkpllsk pildlhsedt lqmdghmlds tryaiigadl rdipdleekl
      181 kkcnmstqlp tlliaecvlv ymtpeqsanl lkwaassfet amfinyeqvn mddrfgqimi
      241 enlrrrqcdl agvetcksle sqrerlltsg wesvsaidmm elysklprae virieslefl
      301 demelleqlm qhyclcwatk ggselglkei ty
//
LOCUS       XP_061009033             969 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein with KRAB and SCAN domains 2 [Dama dama].
ACCESSION   XP_061009033
VERSION     XP_061009033.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153050.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..969
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..969
                     /product="zinc finger protein with KRAB and SCAN domains
                     2"
                     /calculated_mol_wt=110420
     Region          43..150
                     /region_name="SCAN"
                     /note="leucine rich region; smart00431"
                     /db_xref="CDD:128708"
     Region          232..291
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          342..423
                     /region_name="Myb_DNA-bind_4"
                     /note="Myb/SANT-like DNA-binding domain; pfam13837"
                     /db_xref="CDD:463994"
     Region          499..580
                     /region_name="Myb_DNA-bind_4"
                     /note="Myb/SANT-like DNA-binding domain; pfam13837"
                     /db_xref="CDD:463994"
     Region          773..>835
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          779..799
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(784,786,788,790..791,794..795,798,812,814,818..819,
                     822..823,826,840,842,844,846..847,850..851,854)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          807..827
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(807,810,823,827)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          833..855
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          835..855
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          847..872
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          863..883
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          879..900
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          891..911
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          903..928
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          919..939
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(919,922,935,939)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     CDS             1..969
                     /gene="ZKSCAN2"
                     /coded_by="XM_061153050.1:76..2985"
                     /db_xref="GeneID:133063551"
ORIGIN      
        1 maasldpqtd aplgvegcli mkvekepewi sepilegsds sesetfrrcf rqfcyedvtg
       61 pheafsklwe lccrwlkpem rskeqilell vieqfltilp ekiqlwaqkq cpesgeeava
      121 lvihleketg glrqqvsspv hsekqtllga awevadiqpe pveaqprvms qeeaeslqsg
      181 hqeqpnqkre lrplpknarp spwvpspane wntidqevta trvpvgsqgp vkdvhmargf
      241 sykksvhqip ahkdlyrdir kesvgnmvsl gstvpaanki aqleprkepw tiglqssnkr
      301 tvlrsnyike ksvhaiqipa rnagktwreq qqwgledeki agvhwsyeet ktflailkes
      361 rfyetlqacp rnsqvygava ewlrecgflr tpeqcrtkfk slqksyrkvr nghvlepcaf
      421 fedmdallnp aahasstdkp reilslprlk rigisakeqi nlveeeeaae esdgdemgve
      481 firkpelhgg pvifqnlsgv hwgyeetktf ldilhetrfy ealqachrks klygavaeql
      541 recgflrtpe qcrtkfkslq ksyrkvkngh vlescafyke mdalinsras atptsspeea
      601 pspsvqerdd meiepqeptv wepeedsqea lvedsgserm seeeilqepe fqgppgllqs
      661 pndfeiessi kedatqvick dmeqhrafie kskrvisqnv dpgkyhkrdc isgrqwenlh
      721 giqqgklmpq prdlgkavvh qrplvgkrpf rllrygesfg rsarlmcrmt hqkenpskcs
      781 vcgkcfgrsr slvrhqriht gekpfrclnc gksfndssnf gahqrihtge kpyrcgecgk
      841 cfsqssslvi hqrthtgekp yqcgecgrsf tnsshfsahr rvhtgenpyk cadceksfnn
      901 ctrfrehrrv htgekpygci qcgrrfskss vltkhrevhv rekllppppa fcspenplkg
      961 ktddfrqtl
//
LOCUS       XP_061009034             406 aa            linear   MAM 02-DEC-2023
DEFINITION  bifunctional peptidase and arginyl-hydroxylase JMJD5 [Dama dama].
ACCESSION   XP_061009034
VERSION     XP_061009034.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153051.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..406
                     /product="bifunctional peptidase and arginyl-hydroxylase
                     JMJD5"
                     /calculated_mol_wt=45859
     Region          189..406
                     /region_name="Cupin_8"
                     /note="Cupin-like domain; pfam13621"
                     /db_xref="CDD:463936"
     CDS             1..406
                     /gene="KDM8"
                     /coded_by="XM_061153051.1:162..1382"
                     /db_xref="GeneID:133063553"
ORIGIN      
        1 magpsalwea lqallphtke elklelgekv egsvvmllqe aaelfhggqr reclqtcevl
       61 ldysweklnt gpwqhvdkdw rrvyafgcll kavclceppg daasvaaalk acdmgllmga
      121 ailgdillkv atvlqkhlls gkrpapglsq elpsikkard dhvpipdvtt ertvprlhcp
      181 slqyfkkhfl vpgrpvileg vanhwpcmkk wsleyiqeva gcrtvpvevg srytdeewsq
      241 tlmtvnefin kyvrnepkdv gylaqhqlfd qipelkqdis ipdycclgdg eeeeitinaw
      301 fgpqgtispl hqdpqqnflv qvmgrkyirl yspresealy phdthllhnt sqvdvenpdl
      361 ekfprfaeap flscvlspge vlfipvkhwh yvraldlsfs vsfwws
//
LOCUS       XP_061009036             406 aa            linear   MAM 02-DEC-2023
DEFINITION  bifunctional peptidase and arginyl-hydroxylase JMJD5 [Dama dama].
ACCESSION   XP_061009036
VERSION     XP_061009036.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153053.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..406
                     /product="bifunctional peptidase and arginyl-hydroxylase
                     JMJD5"
                     /calculated_mol_wt=45859
     Region          189..406
                     /region_name="Cupin_8"
                     /note="Cupin-like domain; pfam13621"
                     /db_xref="CDD:463936"
     CDS             1..406
                     /gene="KDM8"
                     /coded_by="XM_061153053.1:262..1482"
                     /db_xref="GeneID:133063553"
ORIGIN      
        1 magpsalwea lqallphtke elklelgekv egsvvmllqe aaelfhggqr reclqtcevl
       61 ldysweklnt gpwqhvdkdw rrvyafgcll kavclceppg daasvaaalk acdmgllmga
      121 ailgdillkv atvlqkhlls gkrpapglsq elpsikkard dhvpipdvtt ertvprlhcp
      181 slqyfkkhfl vpgrpvileg vanhwpcmkk wsleyiqeva gcrtvpvevg srytdeewsq
      241 tlmtvnefin kyvrnepkdv gylaqhqlfd qipelkqdis ipdycclgdg eeeeitinaw
      301 fgpqgtispl hqdpqqnflv qvmgrkyirl yspresealy phdthllhnt sqvdvenpdl
      361 ekfprfaeap flscvlspge vlfipvkhwh yvraldlsfs vsfwws
//
LOCUS       XP_061009037             406 aa            linear   MAM 02-DEC-2023
DEFINITION  bifunctional peptidase and arginyl-hydroxylase JMJD5 [Dama dama].
ACCESSION   XP_061009037
VERSION     XP_061009037.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153054.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..406
                     /product="bifunctional peptidase and arginyl-hydroxylase
                     JMJD5"
                     /calculated_mol_wt=45859
     Region          189..406
                     /region_name="Cupin_8"
                     /note="Cupin-like domain; pfam13621"
                     /db_xref="CDD:463936"
     CDS             1..406
                     /gene="KDM8"
                     /coded_by="XM_061153054.1:3835..5055"
                     /db_xref="GeneID:133063553"
ORIGIN      
        1 magpsalwea lqallphtke elklelgekv egsvvmllqe aaelfhggqr reclqtcevl
       61 ldysweklnt gpwqhvdkdw rrvyafgcll kavclceppg daasvaaalk acdmgllmga
      121 ailgdillkv atvlqkhlls gkrpapglsq elpsikkard dhvpipdvtt ertvprlhcp
      181 slqyfkkhfl vpgrpvileg vanhwpcmkk wsleyiqeva gcrtvpvevg srytdeewsq
      241 tlmtvnefin kyvrnepkdv gylaqhqlfd qipelkqdis ipdycclgdg eeeeitinaw
      301 fgpqgtispl hqdpqqnflv qvmgrkyirl yspresealy phdthllhnt sqvdvenpdl
      361 ekfprfaeap flscvlspge vlfipvkhwh yvraldlsfs vsfwws
//
LOCUS       XP_061009038             266 aa            linear   MAM 02-DEC-2023
DEFINITION  non-structural maintenance of chromosomes element 1 homolog [Dama
            dama].
ACCESSION   XP_061009038
VERSION     XP_061009038.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153055.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..266
                     /product="non-structural maintenance of chromosomes
                     element 1 homolog"
                     /calculated_mol_wt=30604
     Region          16..175
                     /region_name="SMC_Nse1"
                     /note="Nse1 non-SMC component of SMC5-6 complex;
                     pfam07574"
                     /db_xref="CDD:462214"
     Region          189..235
                     /region_name="RING-CH-C4HC3_NSE1"
                     /note="RING-CH finger, H2 subclass (C4HC3-type), found in
                     non-structural maintenance of chromosomes (SMC) element 1
                     homolog (NSE1) and similar proteins; cd16493"
                     /db_xref="CDD:438156"
     CDS             1..266
                     /gene="NSMCE1"
                     /coded_by="XM_061153055.1:75..875"
                     /db_xref="GeneID:133063554"
ORIGIN      
        1 mqgstrrmgv mtdvhrrflq llmthgvlee cdvkrlqkhc ykvhdcnatv ekledfinni
       61 nsvleslyie ikkgvteddg rpiyalvnla ttsiskmasd faeneldlfr kaleliidsd
      121 tgfasstnil nlvdqlkgkk mrkkeaehvl qkfvqnkwli ekegeftlhg railemeqyi
      181 retypdavkv cnicrglliq gqscetcgir mhlpcvakyf qsstephcph cndywphevp
      241 evfdpekere tgmsrsnkrs lrsrqh
//
LOCUS       XP_061009039             339 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM50A-like [Dama dama].
ACCESSION   XP_061009039
VERSION     XP_061009039.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153056.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..339
                     /product="protein FAM50A-like"
                     /calculated_mol_wt=39983
     Region          <152..338
                     /region_name="XAP5"
                     /note="circadian clock regulator; pfam04921"
                     /db_xref="CDD:461480"
     CDS             1..339
                     /gene="LOC133063555"
                     /coded_by="XM_061153056.1:225..1244"
                     /db_xref="GeneID:133063555"
ORIGIN      
        1 maqykgaase agramhlmkk rekqreqmeq mkqriaeeni mksnidkkfs ahydaveael
       61 ksstvglvtl ndmkakqeal vkerekqlak keqskelqlk leklrekerk keakrkissl
      121 sftleeeeea geeeeeaavd eeelereeit tkkrkmgknp dvdtsflpdr dreeeenrlr
      181 eelrqeweak qekikseeie itfsywdgsg hrrsvkmkkg ntmqqflqka leilrkdfse
      241 lrsagveqlm yikedliiph hhsfydfivt kargksgplf nfdvhddvrl lsdatvekne
      301 shagkvvlrs wyeknkhifp asrwepydpe kkwdkytir
//
LOCUS       XP_061009040             876 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-4 receptor subunit alpha isoform X1 [Dama dama].
ACCESSION   XP_061009040
VERSION     XP_061009040.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153057.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..876
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..876
                     /product="interleukin-4 receptor subunit alpha isoform X1"
                     /calculated_mol_wt=95025
     Region          96..192
                     /region_name="IL4Ra_N"
                     /note="Interleukin-4 receptor alpha chain, N-terminal;
                     pfam09238"
                     /db_xref="CDD:462720"
     Site            order(194,264,279)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          194..274
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; smart00060"
                     /db_xref="CDD:214495"
     Site            order(280..281,283..284)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          <504..728
                     /region_name="PLN03209"
                     /note="translocon at the inner envelope of chloroplast
                     subunit 62; Provisional"
                     /db_xref="CDD:178748"
     CDS             1..876
                     /gene="IL4R"
                     /coded_by="XM_061153057.1:16..2646"
                     /db_xref="GeneID:133063556"
ORIGIN      
        1 mraawgtrla gavrmqssch sfavsrhlsq dlyrreraad wpsqvlcptq drgavgspdg
       61 aaslctrvps elpnpivggr fccsevscvs pgsmrvlqdp tcfsdyitfs tcewemsrpt
      121 ncqaelrlty qlnfyfsein kcipenkaga gdtvcichml idnvvredty qvdlwggeql
      181 lwnssfkpse hvkplaprnl tvqadishtw lltwsnpyps enllnselsy lvnisnendp
      241 tdfriynvty lgyslrvtas tlksgasysa rvkawaqsyn stwsewspst kwlnyngetl
      301 eqrlqlgvgi scviilavcv scyisvikik kewwdqipnp ahsplvavvi qdsqmplwrk
      361 rsrgqepakc phwktclakl lpcllehgmd rdedfskaar nepsqgpgkv awrpvevskt
      421 ilrpesisvv rcvelfeaqv ekeeedveed kgsfcsspen srglfqegre divarltesm
      481 flhllrdetg gfspqgvges clpplenesa pkpwaefprv gpqeassedk eqplnpessp
      541 patptqnpag lalpempaii sdnpayrsfs tflsqslgpg eldsdpqlae hlgegdpdip
      601 tapqpepetw eqilrqrvlq hsvapgptla pssgyrefvq avkeggaqds glasfgpsee
      661 agykafssll assdscptts gvepsgeegg ykpfqslasg cpgtstpipi plftfgldvd
      721 pphspqdsdw pelepavkgd dgrkslfapv latdplrddl gngiiysalt chlcghlkqc
      781 hgqeeagkvq ivaspccgcc cgdrssplls plkapdslaq gdpleasfst aslaplgvse
      841 egkcplfnap shaqssgqtp avaavlspgp tcmdas
//
LOCUS       XP_061009041             831 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-4 receptor subunit alpha isoform X2 [Dama dama].
ACCESSION   XP_061009041
VERSION     XP_061009041.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153058.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..831
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..831
                     /product="interleukin-4 receptor subunit alpha isoform X2"
                     /calculated_mol_wt=89853
     Region          51..147
                     /region_name="IL4Ra_N"
                     /note="Interleukin-4 receptor alpha chain, N-terminal;
                     pfam09238"
                     /db_xref="CDD:462720"
     Site            order(149,219,234)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          149..229
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; smart00060"
                     /db_xref="CDD:214495"
     Site            order(235..236,238..239)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          <459..683
                     /region_name="PLN03209"
                     /note="translocon at the inner envelope of chloroplast
                     subunit 62; Provisional"
                     /db_xref="CDD:178748"
     CDS             1..831
                     /gene="IL4R"
                     /coded_by="XM_061153058.1:96..2591"
                     /db_xref="GeneID:133063556"
ORIGIN      
        1 mdperaagav gspdgaaslc trvpselpnp ivggrfccse vscvspgsmr vlqdptcfsd
       61 yitfstcewe msrptncqae lrltyqlnfy fseinkcipe nkagagdtvc ichmlidnvv
      121 redtyqvdlw ggeqllwnss fkpsehvkpl aprnltvqad ishtwlltws npypsenlln
      181 selsylvnis nendptdfri ynvtylgysl rvtastlksg asysarvkaw aqsynstwse
      241 wspstkwlny ngetleqrlq lgvgiscvii lavcvscyis vikikkewwd qipnpahspl
      301 vavviqdsqm plwrkrsrgq epakcphwkt clakllpcll ehgmdrdedf skaarnepsq
      361 gpgkvawrpv evsktilrpe sisvvrcvel feaqvekeee dveedkgsfc sspensrglf
      421 qegredivar ltesmflhll rdetggfspq gvgesclppl enesapkpwa efprvgpqea
      481 ssedkeqpln pessppatpt qnpaglalpe mpaiisdnpa yrsfstflsq slgpgeldsd
      541 pqlaehlgeg dpdiptapqp epetweqilr qrvlqhsvap gptlapssgy refvqavkeg
      601 gaqdsglasf gpseeagyka fssllassds cpttsgveps geeggykpfq slasgcpgts
      661 tpipiplftf gldvdpphsp qdsdwpelep avkgddgrks lfapvlatdp lrddlgngii
      721 ysaltchlcg hlkqchgqee agkvqivasp ccgcccgdrs spllsplkap dslaqgdple
      781 asfstaslap lgvseegkcp lfnapshaqs sgqtpavaav lspgptcmda s
//
LOCUS       XP_061009042             830 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-4 receptor subunit alpha isoform X3 [Dama dama].
ACCESSION   XP_061009042
VERSION     XP_061009042.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153059.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..830
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..830
                     /product="interleukin-4 receptor subunit alpha isoform X3"
                     /calculated_mol_wt=89782
     Region          50..146
                     /region_name="IL4Ra_N"
                     /note="Interleukin-4 receptor alpha chain, N-terminal;
                     pfam09238"
                     /db_xref="CDD:462720"
     Site            order(148,218,233)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          148..228
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; smart00060"
                     /db_xref="CDD:214495"
     Site            order(234..235,237..238)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          <458..682
                     /region_name="PLN03209"
                     /note="translocon at the inner envelope of chloroplast
                     subunit 62; Provisional"
                     /db_xref="CDD:178748"
     CDS             1..830
                     /gene="IL4R"
                     /coded_by="XM_061153059.1:105..2597"
                     /db_xref="GeneID:133063556"
ORIGIN      
        1 mdperagavg spdgaaslct rvpselpnpi vggrfccsev scvspgsmrv lqdptcfsdy
       61 itfstcewem srptncqael rltyqlnfyf seinkcipen kagagdtvci chmlidnvvr
      121 edtyqvdlwg geqllwnssf kpsehvkpla prnltvqadi shtwlltwsn pypsenllns
      181 elsylvnisn endptdfriy nvtylgyslr vtastlksga sysarvkawa qsynstwsew
      241 spstkwlnyn getleqrlql gvgiscviil avcvscyisv ikikkewwdq ipnpahsplv
      301 avviqdsqmp lwrkrsrgqe pakcphwktc lakllpclle hgmdrdedfs kaarnepsqg
      361 pgkvawrpve vsktilrpes isvvrcvelf eaqvekeeed veedkgsfcs spensrglfq
      421 egredivarl tesmflhllr detggfspqg vgesclpple nesapkpwae fprvgpqeas
      481 sedkeqplnp essppatptq npaglalpem paiisdnpay rsfstflsqs lgpgeldsdp
      541 qlaehlgegd pdiptapqpe petweqilrq rvlqhsvapg ptlapssgyr efvqavkegg
      601 aqdsglasfg pseeagykaf ssllassdsc pttsgvepsg eeggykpfqs lasgcpgtst
      661 pipiplftfg ldvdpphspq dsdwpelepa vkgddgrksl fapvlatdpl rddlgngiiy
      721 saltchlcgh lkqchgqeea gkvqivaspc cgcccgdrss pllsplkapd slaqgdplea
      781 sfstaslapl gvseegkcpl fnapshaqss gqtpavaavl spgptcmdas
//
LOCUS       XP_061009043             808 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-4 receptor subunit alpha isoform X4 [Dama dama].
ACCESSION   XP_061009043
VERSION     XP_061009043.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153060.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..808
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..808
                     /product="interleukin-4 receptor subunit alpha isoform X4"
                     /calculated_mol_wt=87736
     Region          28..124
                     /region_name="IL4Ra_N"
                     /note="Interleukin-4 receptor alpha chain, N-terminal;
                     pfam09238"
                     /db_xref="CDD:462720"
     Site            order(126,196,211)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          126..206
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; smart00060"
                     /db_xref="CDD:214495"
     Site            order(212..213,215..216)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          <436..660
                     /region_name="PLN03209"
                     /note="translocon at the inner envelope of chloroplast
                     subunit 62; Provisional"
                     /db_xref="CDD:178748"
     CDS             1..808
                     /gene="IL4R"
                     /coded_by="XM_061153060.1:148..2574"
                     /db_xref="GeneID:133063556"
ORIGIN      
        1 mgrllsvlvf pvsclillwv agsgsmrvlq dptcfsdyit fstcewemsr ptncqaelrl
       61 tyqlnfyfse inkcipenka gagdtvcich mlidnvvred tyqvdlwgge qllwnssfkp
      121 sehvkplapr nltvqadish twlltwsnpy psenllnsel sylvnisnen dptdfriynv
      181 tylgyslrvt astlksgasy sarvkawaqs ynstwsewsp stkwlnynge tleqrlqlgv
      241 giscviilav cvscyisvik ikkewwdqip npahsplvav viqdsqmplw rkrsrgqepa
      301 kcphwktcla kllpcllehg mdrdedfska arnepsqgpg kvawrpvevs ktilrpesis
      361 vvrcvelfea qvekeeedve edkgsfcssp ensrglfqeg redivarlte smflhllrde
      421 tggfspqgvg esclpplene sapkpwaefp rvgpqeasse dkeqplnpes sppatptqnp
      481 aglalpempa iisdnpayrs fstflsqslg pgeldsdpql aehlgegdpd iptapqpepe
      541 tweqilrqrv lqhsvapgpt lapssgyref vqavkeggaq dsglasfgps eeagykafss
      601 llassdscpt tsgvepsgee ggykpfqsla sgcpgtstpi piplftfgld vdpphspqds
      661 dwpelepavk gddgrkslfa pvlatdplrd dlgngiiysa ltchlcghlk qchgqeeagk
      721 vqivaspccg cccgdrsspl lsplkapdsl aqgdpleasf staslaplgv seegkcplfn
      781 apshaqssgq tpavaavlsp gptcmdas
//
LOCUS       XP_061009044             808 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-4 receptor subunit alpha isoform X4 [Dama dama].
ACCESSION   XP_061009044
VERSION     XP_061009044.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153061.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..808
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..808
                     /product="interleukin-4 receptor subunit alpha isoform X4"
                     /calculated_mol_wt=87736
     Region          28..124
                     /region_name="IL4Ra_N"
                     /note="Interleukin-4 receptor alpha chain, N-terminal;
                     pfam09238"
                     /db_xref="CDD:462720"
     Site            order(126,196,211)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          126..206
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; smart00060"
                     /db_xref="CDD:214495"
     Site            order(212..213,215..216)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          <436..660
                     /region_name="PLN03209"
                     /note="translocon at the inner envelope of chloroplast
                     subunit 62; Provisional"
                     /db_xref="CDD:178748"
     CDS             1..808
                     /gene="IL4R"
                     /coded_by="XM_061153061.1:138..2564"
                     /db_xref="GeneID:133063556"
ORIGIN      
        1 mgrllsvlvf pvsclillwv agsgsmrvlq dptcfsdyit fstcewemsr ptncqaelrl
       61 tyqlnfyfse inkcipenka gagdtvcich mlidnvvred tyqvdlwgge qllwnssfkp
      121 sehvkplapr nltvqadish twlltwsnpy psenllnsel sylvnisnen dptdfriynv
      181 tylgyslrvt astlksgasy sarvkawaqs ynstwsewsp stkwlnynge tleqrlqlgv
      241 giscviilav cvscyisvik ikkewwdqip npahsplvav viqdsqmplw rkrsrgqepa
      301 kcphwktcla kllpcllehg mdrdedfska arnepsqgpg kvawrpvevs ktilrpesis
      361 vvrcvelfea qvekeeedve edkgsfcssp ensrglfqeg redivarlte smflhllrde
      421 tggfspqgvg esclpplene sapkpwaefp rvgpqeasse dkeqplnpes sppatptqnp
      481 aglalpempa iisdnpayrs fstflsqslg pgeldsdpql aehlgegdpd iptapqpepe
      541 tweqilrqrv lqhsvapgpt lapssgyref vqavkeggaq dsglasfgps eeagykafss
      601 llassdscpt tsgvepsgee ggykpfqsla sgcpgtstpi piplftfgld vdpphspqds
      661 dwpelepavk gddgrkslfa pvlatdplrd dlgngiiysa ltchlcghlk qchgqeeagk
      721 vqivaspccg cccgdrsspl lsplkapdsl aqgdpleasf staslaplgv seegkcplfn
      781 apshaqssgq tpavaavlsp gptcmdas
//
LOCUS       XP_061009045             808 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-4 receptor subunit alpha isoform X4 [Dama dama].
ACCESSION   XP_061009045
VERSION     XP_061009045.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153062.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..808
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..808
                     /product="interleukin-4 receptor subunit alpha isoform X4"
                     /calculated_mol_wt=87736
     Region          28..124
                     /region_name="IL4Ra_N"
                     /note="Interleukin-4 receptor alpha chain, N-terminal;
                     pfam09238"
                     /db_xref="CDD:462720"
     Site            order(126,196,211)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          126..206
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; smart00060"
                     /db_xref="CDD:214495"
     Site            order(212..213,215..216)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          <436..660
                     /region_name="PLN03209"
                     /note="translocon at the inner envelope of chloroplast
                     subunit 62; Provisional"
                     /db_xref="CDD:178748"
     CDS             1..808
                     /gene="IL4R"
                     /coded_by="XM_061153062.1:139..2565"
                     /db_xref="GeneID:133063556"
ORIGIN      
        1 mgrllsvlvf pvsclillwv agsgsmrvlq dptcfsdyit fstcewemsr ptncqaelrl
       61 tyqlnfyfse inkcipenka gagdtvcich mlidnvvred tyqvdlwgge qllwnssfkp
      121 sehvkplapr nltvqadish twlltwsnpy psenllnsel sylvnisnen dptdfriynv
      181 tylgyslrvt astlksgasy sarvkawaqs ynstwsewsp stkwlnynge tleqrlqlgv
      241 giscviilav cvscyisvik ikkewwdqip npahsplvav viqdsqmplw rkrsrgqepa
      301 kcphwktcla kllpcllehg mdrdedfska arnepsqgpg kvawrpvevs ktilrpesis
      361 vvrcvelfea qvekeeedve edkgsfcssp ensrglfqeg redivarlte smflhllrde
      421 tggfspqgvg esclpplene sapkpwaefp rvgpqeasse dkeqplnpes sppatptqnp
      481 aglalpempa iisdnpayrs fstflsqslg pgeldsdpql aehlgegdpd iptapqpepe
      541 tweqilrqrv lqhsvapgpt lapssgyref vqavkeggaq dsglasfgps eeagykafss
      601 llassdscpt tsgvepsgee ggykpfqsla sgcpgtstpi piplftfgld vdpphspqds
      661 dwpelepavk gddgrkslfa pvlatdplrd dlgngiiysa ltchlcghlk qchgqeeagk
      721 vqivaspccg cccgdrsspl lsplkapdsl aqgdpleasf staslaplgv seegkcplfn
      781 apshaqssgq tpavaavlsp gptcmdas
//
LOCUS       XP_061009046             808 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-4 receptor subunit alpha isoform X4 [Dama dama].
ACCESSION   XP_061009046
VERSION     XP_061009046.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153063.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..808
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..808
                     /product="interleukin-4 receptor subunit alpha isoform X4"
                     /calculated_mol_wt=87736
     Region          28..124
                     /region_name="IL4Ra_N"
                     /note="Interleukin-4 receptor alpha chain, N-terminal;
                     pfam09238"
                     /db_xref="CDD:462720"
     Site            order(126,196,211)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          126..206
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; smart00060"
                     /db_xref="CDD:214495"
     Site            order(212..213,215..216)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          <436..660
                     /region_name="PLN03209"
                     /note="translocon at the inner envelope of chloroplast
                     subunit 62; Provisional"
                     /db_xref="CDD:178748"
     CDS             1..808
                     /gene="IL4R"
                     /coded_by="XM_061153063.1:44..2470"
                     /db_xref="GeneID:133063556"
ORIGIN      
        1 mgrllsvlvf pvsclillwv agsgsmrvlq dptcfsdyit fstcewemsr ptncqaelrl
       61 tyqlnfyfse inkcipenka gagdtvcich mlidnvvred tyqvdlwgge qllwnssfkp
      121 sehvkplapr nltvqadish twlltwsnpy psenllnsel sylvnisnen dptdfriynv
      181 tylgyslrvt astlksgasy sarvkawaqs ynstwsewsp stkwlnynge tleqrlqlgv
      241 giscviilav cvscyisvik ikkewwdqip npahsplvav viqdsqmplw rkrsrgqepa
      301 kcphwktcla kllpcllehg mdrdedfska arnepsqgpg kvawrpvevs ktilrpesis
      361 vvrcvelfea qvekeeedve edkgsfcssp ensrglfqeg redivarlte smflhllrde
      421 tggfspqgvg esclpplene sapkpwaefp rvgpqeasse dkeqplnpes sppatptqnp
      481 aglalpempa iisdnpayrs fstflsqslg pgeldsdpql aehlgegdpd iptapqpepe
      541 tweqilrqrv lqhsvapgpt lapssgyref vqavkeggaq dsglasfgps eeagykafss
      601 llassdscpt tsgvepsgee ggykpfqsla sgcpgtstpi piplftfgld vdpphspqds
      661 dwpelepavk gddgrkslfa pvlatdplrd dlgngiiysa ltchlcghlk qchgqeeagk
      721 vqivaspccg cccgdrsspl lsplkapdsl aqgdpleasf staslaplgv seegkcplfn
      781 apshaqssgq tpavaavlsp gptcmdas
//
LOCUS       XP_061009047             783 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-4 receptor subunit alpha isoform X5 [Dama dama].
ACCESSION   XP_061009047
VERSION     XP_061009047.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153064.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..783
                     /product="interleukin-4 receptor subunit alpha isoform X5"
                     /calculated_mol_wt=85136
     Region          3..99
                     /region_name="IL4Ra_N"
                     /note="Interleukin-4 receptor alpha chain, N-terminal;
                     pfam09238"
                     /db_xref="CDD:462720"
     Site            order(101,171,186)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          101..181
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; smart00060"
                     /db_xref="CDD:214495"
     Site            order(187..188,190..191)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          <411..635
                     /region_name="PLN03209"
                     /note="translocon at the inner envelope of chloroplast
                     subunit 62; Provisional"
                     /db_xref="CDD:178748"
     CDS             1..783
                     /gene="IL4R"
                     /coded_by="XM_061153064.1:191..2542"
                     /db_xref="GeneID:133063556"
ORIGIN      
        1 mrvlqdptcf sdyitfstce wemsrptncq aelrltyqln fyfseinkci penkagagdt
       61 vcichmlidn vvredtyqvd lwggeqllwn ssfkpsehvk plaprnltvq adishtwllt
      121 wsnpypsenl lnselsylvn isnendptdf riynvtylgy slrvtastlk sgasysarvk
      181 awaqsynstw sewspstkwl nyngetleqr lqlgvgiscv iilavcvscy isvikikkew
      241 wdqipnpahs plvavviqds qmplwrkrsr gqepakcphw ktclakllpc llehgmdrde
      301 dfskaarnep sqgpgkvawr pvevsktilr pesisvvrcv elfeaqveke eedveedkgs
      361 fcsspensrg lfqegrediv arltesmflh llrdetggfs pqgvgesclp plenesapkp
      421 waefprvgpq eassedkeqp lnpessppat ptqnpaglal pempaiisdn payrsfstfl
      481 sqslgpgeld sdpqlaehlg egdpdiptap qpepetweqi lrqrvlqhsv apgptlapss
      541 gyrefvqavk eggaqdsgla sfgpseeagy kafssllass dscpttsgve psgeeggykp
      601 fqslasgcpg tstpipiplf tfgldvdpph spqdsdwpel epavkgddgr kslfapvlat
      661 dplrddlgng iiysaltchl cghlkqchgq eeagkvqiva spccgcccgd rsspllsplk
      721 apdslaqgdp leasfstasl aplgvseegk cplfnapsha qssgqtpava avlspgptcm
      781 das
//
LOCUS       XP_061009048             531 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-21 receptor isoform X1 [Dama dama].
ACCESSION   XP_061009048
VERSION     XP_061009048.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153065.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..531
                     /product="interleukin-21 receptor isoform X1"
                     /calculated_mol_wt=57844
     CDS             1..531
                     /gene="IL21R"
                     /coded_by="XM_061153065.1:615..2210"
                     /db_xref="GeneID:133063558"
ORIGIN      
        1 mpsawaatll llmlqgawgc snlvcytdyv etitciletw agqpdsltlt wydtyeelqd
       61 evtscsllrs thnathaeyt crmnvflfmg ddlfnvsmtd psgnysqecr sfllaenikp
      121 sppfnvtvnf sgcynvswss dssfiprdrv yalkdklqye lryrkvgepw alspgrklvs
      181 edsrsilllp lefhngtsye lqvragpspg ssfqgtwsew sdpvvfhtqp eerkgdlylq
      241 lvpillipvc filvffglkv pwrpwekvwl qvsspkpffq plyvghsgdf kkwvgtpfta
      301 sslelrpwgp gvhlalemcs scplqgaakg lvptelpepa dlveadgape pgswgpvpst
      361 agslgssvys qekdrlyglv sidtvtvvda eglcawpctc eddgypalnl dsglepgpgt
      421 edpllstgat ilscgcvsas gpvrpgslld rlrlpcedea dwtpgpsdse agsppvgldm
      481 ntfdsgfads dcgspvgsdf ssprdeeppr sylrqwvvma ppptppgsqa s
//
LOCUS       XP_061009050             449 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-21 receptor isoform X2 [Dama dama].
ACCESSION   XP_061009050
VERSION     XP_061009050.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153067.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..449
                     /product="interleukin-21 receptor isoform X2"
                     /calculated_mol_wt=48591
     CDS             1..449
                     /gene="IL21R"
                     /coded_by="XM_061153067.1:759..2108"
                     /db_xref="GeneID:133063558"
ORIGIN      
        1 mnvflfmgdd lfnvsmtdps gnysqecrsf llaenikpsp pfnvtvnfsg cynvswssds
       61 sfiprdrvya lkdklqyelr yrkvgepwal spgrklvsed srsilllple fhngtsyelq
      121 vragpspgss fqgtwsewsd pvvfhtqpee rkgdlylqlv pillipvcfi lvffglkvpw
      181 rpwekvwlqv sspkpffqpl yvghsgdfkk wvgtpftass lelrpwgpgv hlalemcssc
      241 plqgaakglv ptelpepadl veadgapepg swgpvpstag slgssvysqe kdrlyglvsi
      301 dtvtvvdaeg lcawpctced dgypalnlds glepgpgted pllstgatil scgcvsasgp
      361 vrpgslldrl rlpcedeadw tpgpsdseag sppvgldmnt fdsgfadsdc gspvgsdfss
      421 prdeepprsy lrqwvvmapp ptppgsqas
//
LOCUS       XP_061009051             447 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-21 receptor isoform X3 [Dama dama].
ACCESSION   XP_061009051
VERSION     XP_061009051.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153068.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..447
                     /product="interleukin-21 receptor isoform X3"
                     /calculated_mol_wt=48208
     CDS             1..447
                     /gene="IL21R"
                     /coded_by="XM_061153068.1:619..1962"
                     /db_xref="GeneID:133063558"
ORIGIN      
        1 mpsawaatll llmlqgawgc snlvcytdyv etitciletw agqpdsltlt wydtyeelqd
       61 evtscsllrs thnathaeyt crmnvflfmg ddlfnvsmtd psgnysqecr sfllaenksr
      121 ekaglrglqk hpspplgvpq rhklraaerk gdlylqlvpi llipvcfilv ffglkvpwrp
      181 wekvwlqvss pkpffqplyv ghsgdfkkwv gtpftassle lrpwgpgvhl alemcsscpl
      241 qgaakglvpt elpepadlve adgapepgsw gpvpstagsl gssvysqekd rlyglvsidt
      301 vtvvdaeglc awpctceddg ypalnldsgl epgpgtedpl lstgatilsc gcvsasgpvr
      361 pgslldrlrl pcedeadwtp gpsdseagsp pvgldmntfd sgfadsdcgs pvgsdfsspr
      421 deepprsylr qwvvmapppt ppgsqas
//
LOCUS       XP_061009052            2096 aa            linear   MAM 02-DEC-2023
DEFINITION  general transcription factor 3C polypeptide 1 isoform X1 [Dama
            dama].
ACCESSION   XP_061009052
VERSION     XP_061009052.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153069.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2096
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2096
                     /product="general transcription factor 3C polypeptide 1
                     isoform X1"
                     /calculated_mol_wt=235872
     Region          174..248
                     /region_name="B-block_TFIIIC"
                     /note="B-block binding subunit of TFIIIC; pfam04182"
                     /db_xref="CDD:367858"
     Region          610..706
                     /region_name="Tau138_eWH"
                     /note="extended winged-helix domain of tau138 and related
                     proteins; cd16169"
                     /db_xref="CDD:320085"
     Region          <1809..>1946
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     CDS             1..2096
                     /gene="GTF3C1"
                     /coded_by="XM_061153069.1:68..6358"
                     /db_xref="GeneID:133063559"
ORIGIN      
        1 mdalesllde valegldglc lpalwsrlet rvppfplple pytqeflwra latnpgisfy
       61 eeprerpdlq lqdryeeidl etgivesrrd pvpledvypi hmilenkdgi qgscryfker
      121 knitndirtk mlqprctmve afgrwgkkli ivasqdmryr aligfegdpd lklpdfsyci
      181 lerlgrsrwq gelqrdlhst afkvdagklh yhrkilnkng litmqshvir lptgaqqhsi
      241 llllnrfhmd rrskydilme klstllsarn nrtetlgklr eelglcertf krlyqymlna
      301 glakvvplpl keihpergpc ktkkgtdvmv rclrllkefk rkvdddddde dviskgvppv
      361 divferdmlt qtyelierrg tkgisqaeir vamnvgklea rmlcrllqrf kvvkgfmede
      421 grqrttkyis cvfaeesdls rqyerekarn ellttvslas vqeesllpeg edaflselds
      481 deeggggsrk rkgrraprda rsfsngglrt qphhstpskg gwkvinlhpl kkqpssgaae
      541 erasrgtfgg dnldtsgsse lgmslgphcv dshsgdiavi eevrlenske sggsqkagkh
      601 gpgqdkphet yrllkrrnli ieavtnlrli eslftiqkmi mdqekqegvs tkcckksiir
      661 lvqnlseegl lrlyrttviq dgikkkvdlv vhpsmdqndp lvrsaieqvr frmsnsstan
      721 rmkapqppvp qeeaeeesqg eegpsgsgda qpsasskpeg grvkktqekm gvtqlknyhp
      781 vvvpglgrsl gflpkmprlr vihmflwyli yghpttveel sfserkagvp cssgsnleas
      841 fdaaakdtqd aatwegevel atetvfvdea swrryvppip ihkdfgfgwa lvsdlllclp
      901 lsiftqivqv sykvdhleef lndplkkhtl irflprsirq qllykrrfif svvenlqrlc
      961 fmgllqfgpt ekfqdkdqvf vylkknvgiv dtttcdphyn varssrpfer rsyvlnsmqd
     1021 venywfdlqc vclntplgvv rcprarkssg pdqgsdeegr mqkeqenamd khtlerkcam
     1081 meytmgsrev vdegiipgdg lgaagldssf yahlkrnwiw tsyimdkakk ettasenglt
     1141 mrlqtflskr pmplgaggng rltvwgdara gsglcaerde hvevereptl ernqkvkggk
     1201 sqkrkrlkkd pgkkikrkkk eelpedknkr ryhdeadqsa lqrmtrlrvt wslqedgllm
     1261 lcriasnvln tkvkgpfvpw qvvrdilhst leesldktsl svgrraryii knpqaylnyk
     1321 vclaevyqdk alvgeflsrk gdygnpkvca sefkefvakl rekfssalkn pnleipdtle
     1381 elfaryrvlv igdrkdqvmk edelksvddi hflvlqnliq stlalsdrqm eicqsfqtfr
     1441 lyrdykeqvl vkafvdyqrr slvnrrrvnh tlgpkknral pfapmsyqls qayhriftwr
     1501 fpstvctesf rffsrllaag kqdqadhfsf kdqncsepas dlvafsldgp ggncvtalil
     1561 fslglvsvdv ripeqivvvd ssmvenevik slgkdstlee dedeeedlde gsgakrrsie
     1621 vkahqashtn yllmkgycvp givsnrnlsp ndnivvnscl vkfrlrctpk ptrlmladps
     1681 leeltvgpsc lpdtftrlin sqedtcslee fvhqvalsgy qpgdvfaale iqeaiaaagc
     1741 fgvdlleltk qfsplartds ertrtftdyv qdllehqqvl evggstarlv tmanahpwll
     1801 hsvrlkdkee gtdphredpr agppegpsse dnpregqapp sqstkrrgsw agadassqgg
     1861 sadpkgalep pakrpalldi rsapspgpra eeelgtlapa llvapedgga setgpgdqeg
     1921 vgvpsfpgqe qlscqaqlpe tpedprglad gsaagnlsqv awerdcesvr figrpwrivd
     1981 grlntpvvkg mmeavlyhim trpgvpescl lqhyrgvlqp lavlellqgl etlgcikkcv
     2041 lrkpaavslf skppvgeapp sldespvvfy eptldctirl grvfpnevnw nkwvhl
//
LOCUS       XP_061009053            1680 aa            linear   MAM 02-DEC-2023
DEFINITION  general transcription factor 3C polypeptide 1 isoform X2 [Dama
            dama].
ACCESSION   XP_061009053
VERSION     XP_061009053.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153070.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1680
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1680
                     /product="general transcription factor 3C polypeptide 1
                     isoform X2"
                     /calculated_mol_wt=187536
     Region          194..290
                     /region_name="Tau138_eWH"
                     /note="extended winged-helix domain of tau138 and related
                     proteins; cd16169"
                     /db_xref="CDD:320085"
     Region          <1393..>1530
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     CDS             1..1680
                     /gene="GTF3C1"
                     /coded_by="XM_061153070.1:134..5176"
                     /db_xref="GeneID:133063559"
ORIGIN      
        1 medegrqrtt kyiscvfaee sdlsrqyere karnellttv slasvqeesl lpegedafls
       61 eldsdeeggg gsrkrkgrra prdarsfsng glrtqphhst pskggwkvin lhplkkqpss
      121 gaaeerasrg tfggdnldts gsselgmslg phcvdshsgd iavieevrle nskesggsqk
      181 agkhgpgqdk phetyrllkr rnliieavtn lrlieslfti qkmimdqekq egvstkcckk
      241 siirlvqnls eegllrlyrt tviqdgikkk vdlvvhpsmd qndplvrsai eqvrfrmsns
      301 stanrmkapq ppvpqeeaee esqgeegpsg sgdaqpsass kpeggrvkkt qekmgvtqlk
      361 nyhpvvvpgl grslgflpkm prlrvihmfl wyliyghptt veelsfserk agvpcssgsn
      421 leasfdaaak dtqdaatweg evelatetvf vdeaswrryv ppipihkdfg fgwalvsdll
      481 lclplsiftq ivqvsykvdh leeflndplk khtlirflpr sirqqllykr rfifsvvenl
      541 qrlcfmgllq fgptekfqdk dqvfvylkkn vgivdtttcd phynvarssr pferrsyvln
      601 smqdvenywf dlqcvclntp lgvvrcprar kssgpdqgsd eegrmqkeqe namdkhtler
      661 kcammeytmg srevvdegii pgdglgaagl dssfyahlkr nwiwtsyimd kakkettase
      721 ngltmrlqtf lskrpmplga ggngrltvwg daragsglca erdehvever eptlernqkv
      781 kggksqkrkr lkkdpgkkik rkkkeelped knkrryhdea dqsalqrmtr lrvtwslqed
      841 gllmlcrias nvlntkvkgp fvpwqvvrdi lhstleesld ktslsvgrra ryiiknpqay
      901 lnykvclaev yqdkalvgef lsrkgdygnp kvcasefkef vaklrekfss alknpnleip
      961 dtleelfary rvlvigdrkd qvmkedelks vddihflvlq nliqstlals drqmeicqsf
     1021 qtfrlyrdyk eqvlvkafvd yqrrslvnrr rvnhtlgpkk nralpfapms yqlsqayhri
     1081 ftwrfpstvc tesfrffsrl laagkqdqad hfsfkdqncs epasdlvafs ldgpggncvt
     1141 alilfslglv svdvripeqi vvvdssmven evikslgkds tleededeee dldegsgakr
     1201 rsievkahqa shtnyllmkg ycvpgivsnr nlspndnivv nsclvkfrlr ctpkptrlml
     1261 adpsleeltv gpsclpdtft rlinsqedtc sleefvhqva lsgyqpgdvf aaleiqeaia
     1321 aagcfgvdll eltkqfspla rtdsertrtf tdyvqdlleh qqvlevggst arlvtmanah
     1381 pwllhsvrlk dkeegtdphr edpragppeg pssednpreg qappsqstkr rgswagadas
     1441 sqggsadpkg aleppakrpa lldirsapsp gpraeeelgt lapallvape dggasetgpg
     1501 dqegvgvpsf pgqeqlscqa qlpetpedpr gladgsaagn lsqvawerdc esvrfigrpw
     1561 rivdgrlntp vvkgmmeavl yhimtrpgvp escllqhyrg vlqplavlel lqgletlgci
     1621 kkcvlrkpaa vslfskppvg eappsldesp vvfyeptldc tirlgrvfpn evnwnkwvhl
//
LOCUS       XP_061009054            1657 aa            linear   MAM 02-DEC-2023
DEFINITION  katanin-interacting protein isoform X1 [Dama dama].
ACCESSION   XP_061009054
VERSION     XP_061009054.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153071.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1657
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1657
                     /product="katanin-interacting protein isoform X1"
                     /calculated_mol_wt=184051
     Region          <523..648
                     /region_name="DUF4457"
                     /note="Domain of unknown function (DUF4457); pfam14652"
                     /db_xref="CDD:464238"
     Region          668..>922
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          <1003..1147
                     /region_name="DUF4457"
                     /note="Domain of unknown function (DUF4457); pfam14652"
                     /db_xref="CDD:464238"
     Region          1252..1571
                     /region_name="DUF4457"
                     /note="Domain of unknown function (DUF4457); pfam14652"
                     /db_xref="CDD:464238"
     CDS             1..1657
                     /gene="KATNIP"
                     /coded_by="XM_061153071.1:37..5010"
                     /db_xref="GeneID:133063560"
ORIGIN      
        1 mdgqtlrkae rsrscsrekk egytkdmvtd fdekhdeyli llqqknrilk hlktkdpvql
       61 rlehleqgfs vyvngansel kasprkavha dfsrsashte gthdcgrrtl fqeaeealrr
      121 sartapskvq rrgwhqksvq irteagprly iqpppdyaed sepcgdvtvk vkdasgdcpq
      181 dtksptstta cdfnfslpna kgrsdlpsst drerilltiq dvmelrksle lsvnlqrkek
      241 dgssdeydsi eedvlsepep edqvlvgcpr ddsplsrrys vqkdfpedqe tegrlpqgpd
      301 tlvvlefnpa sksnkkernl sakrkdnaev fipskpephl spqpptmfpd qdracsrpgs
      361 rrerplsatr kpvreaedre edasavlrai qvenealqra ilsrkaeppa sppqdtegpr
      421 akpwtsllke gtpelppitt atsteepara aggaravsea idrigllgsr qqqkllkvlq
      481 aiesdsahls rvvspteeqv ldpedksgpk aeeikdaiyv tmeilsnwgs aswvgiteve
      541 ffdlnntkly vsphdvdirn tdmpgdlghl vnrnlagkkd pslwtcpfhp plqlffvirn
      601 tgqlrdfglt kikvwnywta dgdfdigakn vklyvnkkli fdgkldkggg eapnsilvgl
      661 qdermeksda alleesrgvr etpgtegdee lrtshsepag aaedakvssq gnlfggrmss
      721 pdgvkdslsr seeelsvsaa pssvggepsg pphsppvecp appdqelsll rqlgnltgrk
      781 vseppgktps wlqpspagkg rkpggpklkp lwlspekpld grdglpsddv igegpgvsea
      841 rdkgprreqg rlsswnviaa eraqrttpkv hgddfdifnq pphreqpasg rrglrrdals
      901 lshgdgqpas sedtwstqmp prprwhseqe htlheswdsl tafdrshrgr isnmefqgdi
      961 ldeflqqqks srqsdqpppw keekpepvkg qdhgsletdd ggdfkipvlp ygqhlvidik
     1021 stwgdrhyvg lngieifssk gepvrveniq adppdinilp aygrdprvvs nlidgvnrtq
     1081 ddmhvwlapf tpgkshsism dfaqpcqval iriwnynksr ihsfrgvkdi tmlldaqcif
     1141 kgeiakasgt ltgapehfgd tilfttdddi leaifcsdat fdldveslcs lqseealrrp
     1201 stadgqgeer pytqagswad drglepelpp gppvpdvttp epgvyygicl qlnftaswgd
     1261 lhylgltgle vvgqdgqalp inpqqisasp rdlndlpeyt ddsrtldkli dganitmede
     1321 hmwlipfspg ldhvvtirfd raesiaglrf wnynkspedt yrgakivhvs ldglcvsppe
     1381 gflirkgpgh chfdfaqeil fvdylqarpl pppvqrldtk slerasmdye appmpcgfif
     1441 qfqlltswgd pyyigltgle lydergekip lsenniaafp dsvnslegvc gdvrtpdkli
     1501 dqvnntsdgr hmwlapilpg lvnrvyvifd lpttvsmikl wnyaktphrg vkefgllvdd
     1561 llvyngilam vghliggilp tceptlpyht ilftedtdic hqekhttisn qvedqdvqmm
     1621 nenqivtnsk rkqnaadpal rpktciseke tarrwrc
//
LOCUS       XP_061009055            1637 aa            linear   MAM 02-DEC-2023
DEFINITION  katanin-interacting protein isoform X2 [Dama dama].
ACCESSION   XP_061009055
VERSION     XP_061009055.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153072.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1637
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1637
                     /product="katanin-interacting protein isoform X2"
                     /calculated_mol_wt=181856
     Region          <503..628
                     /region_name="DUF4457"
                     /note="Domain of unknown function (DUF4457); pfam14652"
                     /db_xref="CDD:464238"
     Region          648..>902
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          <983..1127
                     /region_name="DUF4457"
                     /note="Domain of unknown function (DUF4457); pfam14652"
                     /db_xref="CDD:464238"
     Region          1232..1551
                     /region_name="DUF4457"
                     /note="Domain of unknown function (DUF4457); pfam14652"
                     /db_xref="CDD:464238"
     CDS             1..1637
                     /gene="KATNIP"
                     /coded_by="XM_061153072.1:37..4950"
                     /db_xref="GeneID:133063560"
ORIGIN      
        1 mdgqtlrkae rsrscsrekk egytkdmvtd fdekhdeyli llqqknrilk hlktkdpvql
       61 rlehleqgfs vyvngansel kasprkavha dfsrsashte gthdcgrrtl fqeaeealrr
      121 sartapskvq rrgwhqksvq irteagprly iqpppdyaed sepcgdvtvk vkdasgdcpq
      181 dtksptstta cdfnfslpna kgrsdlpsst drerilltiq dvmelrksle lsvnlqrkek
      241 dgssdeydsi eedvlsepep edqvlvgcpr ddsplsrrys vqkdfpedqe tegrlpqgpd
      301 tlvvlefnpa sksnkkernl sakrkdnaev fipskpephl spqpptmfpd qdracsrpgs
      361 rrerplsatr kpvreaedre edasavlrai qvenealqra ilsrkaeppa sppqlppitt
      421 atsteepara aggaravsea idrigllgsr qqqkllkvlq aiesdsahls rvvspteeqv
      481 ldpedksgpk aeeikdaiyv tmeilsnwgs aswvgiteve ffdlnntkly vsphdvdirn
      541 tdmpgdlghl vnrnlagkkd pslwtcpfhp plqlffvirn tgqlrdfglt kikvwnywta
      601 dgdfdigakn vklyvnkkli fdgkldkggg eapnsilvgl qdermeksda alleesrgvr
      661 etpgtegdee lrtshsepag aaedakvssq gnlfggrmss pdgvkdslsr seeelsvsaa
      721 pssvggepsg pphsppvecp appdqelsll rqlgnltgrk vseppgktps wlqpspagkg
      781 rkpggpklkp lwlspekpld grdglpsddv igegpgvsea rdkgprreqg rlsswnviaa
      841 eraqrttpkv hgddfdifnq pphreqpasg rrglrrdals lshgdgqpas sedtwstqmp
      901 prprwhseqe htlheswdsl tafdrshrgr isnmefqgdi ldeflqqqks srqsdqpppw
      961 keekpepvkg qdhgsletdd ggdfkipvlp ygqhlvidik stwgdrhyvg lngieifssk
     1021 gepvrveniq adppdinilp aygrdprvvs nlidgvnrtq ddmhvwlapf tpgkshsism
     1081 dfaqpcqval iriwnynksr ihsfrgvkdi tmlldaqcif kgeiakasgt ltgapehfgd
     1141 tilfttdddi leaifcsdat fdldveslcs lqseealrrp stadgqgeer pytqagswad
     1201 drglepelpp gppvpdvttp epgvyygicl qlnftaswgd lhylgltgle vvgqdgqalp
     1261 inpqqisasp rdlndlpeyt ddsrtldkli dganitmede hmwlipfspg ldhvvtirfd
     1321 raesiaglrf wnynkspedt yrgakivhvs ldglcvsppe gflirkgpgh chfdfaqeil
     1381 fvdylqarpl pppvqrldtk slerasmdye appmpcgfif qfqlltswgd pyyigltgle
     1441 lydergekip lsenniaafp dsvnslegvc gdvrtpdkli dqvnntsdgr hmwlapilpg
     1501 lvnrvyvifd lpttvsmikl wnyaktphrg vkefgllvdd llvyngilam vghliggilp
     1561 tceptlpyht ilftedtdic hqekhttisn qvedqdvqmm nenqivtnsk rkqnaadpal
     1621 rpktciseke tarrwrc
//
LOCUS       XP_061009056            1637 aa            linear   MAM 02-DEC-2023
DEFINITION  katanin-interacting protein isoform X3 [Dama dama].
ACCESSION   XP_061009056
VERSION     XP_061009056.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153073.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1637
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1637
                     /product="katanin-interacting protein isoform X3"
                     /calculated_mol_wt=181977
     Region          <503..628
                     /region_name="DUF4457"
                     /note="Domain of unknown function (DUF4457); pfam14652"
                     /db_xref="CDD:464238"
     Region          648..>902
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          <983..1127
                     /region_name="DUF4457"
                     /note="Domain of unknown function (DUF4457); pfam14652"
                     /db_xref="CDD:464238"
     Region          1232..1551
                     /region_name="DUF4457"
                     /note="Domain of unknown function (DUF4457); pfam14652"
                     /db_xref="CDD:464238"
     CDS             1..1637
                     /gene="KATNIP"
                     /coded_by="XM_061153073.1:37..4950"
                     /db_xref="GeneID:133063560"
ORIGIN      
        1 mdgqtlrkae rsrscsrekk egytkdmvtd fdekhdeyli llqqknrilk hlktkdpvql
       61 rlehleqgfs vyvngansel kasprkavha dfsrsashte gthdcgrrtl fqeaeealrr
      121 sartapskvq rrgwhqksvq irteagprly iqpppdyaed sepcgdvtvk vkdasgdcpq
      181 elrkslelsv nlqrkekdgs sdeydsieed vlsepepedq vlvgcprdds plsrrysvqk
      241 dfpedqeteg rlpqgpdtlv vlefnpasks nkkernlsak rkdnaevfip skpephlspq
      301 pptmfpdqdr acsrpgsrre rplsatrkpv reaedreeda savlraiqve nealqrails
      361 rkaeppaspp qiwlmaprnq rgflvarlsv evaedtegpr akpwtsllke gtpelppitt
      421 atsteepara aggaravsea idrigllgsr qqqkllkvlq aiesdsahls rvvspteeqv
      481 ldpedksgpk aeeikdaiyv tmeilsnwgs aswvgiteve ffdlnntkly vsphdvdirn
      541 tdmpgdlghl vnrnlagkkd pslwtcpfhp plqlffvirn tgqlrdfglt kikvwnywta
      601 dgdfdigakn vklyvnkkli fdgkldkggg eapnsilvgl qdermeksda alleesrgvr
      661 etpgtegdee lrtshsepag aaedakvssq gnlfggrmss pdgvkdslsr seeelsvsaa
      721 pssvggepsg pphsppvecp appdqelsll rqlgnltgrk vseppgktps wlqpspagkg
      781 rkpggpklkp lwlspekpld grdglpsddv igegpgvsea rdkgprreqg rlsswnviaa
      841 eraqrttpkv hgddfdifnq pphreqpasg rrglrrdals lshgdgqpas sedtwstqmp
      901 prprwhseqe htlheswdsl tafdrshrgr isnmefqgdi ldeflqqqks srqsdqpppw
      961 keekpepvkg qdhgsletdd ggdfkipvlp ygqhlvidik stwgdrhyvg lngieifssk
     1021 gepvrveniq adppdinilp aygrdprvvs nlidgvnrtq ddmhvwlapf tpgkshsism
     1081 dfaqpcqval iriwnynksr ihsfrgvkdi tmlldaqcif kgeiakasgt ltgapehfgd
     1141 tilfttdddi leaifcsdat fdldveslcs lqseealrrp stadgqgeer pytqagswad
     1201 drglepelpp gppvpdvttp epgvyygicl qlnftaswgd lhylgltgle vvgqdgqalp
     1261 inpqqisasp rdlndlpeyt ddsrtldkli dganitmede hmwlipfspg ldhvvtirfd
     1321 raesiaglrf wnynkspedt yrgakivhvs ldglcvsppe gflirkgpgh chfdfaqeil
     1381 fvdylqarpl pppvqrldtk slerasmdye appmpcgfif qfqlltswgd pyyigltgle
     1441 lydergekip lsenniaafp dsvnslegvc gdvrtpdkli dqvnntsdgr hmwlapilpg
     1501 lvnrvyvifd lpttvsmikl wnyaktphrg vkefgllvdd llvyngilam vghliggilp
     1561 tceptlpyht ilftedtdic hqekhttisn qvedqdvqmm nenqivtnsk rkqnaadpal
     1621 rpktciseke tarrwrc
//
LOCUS       XP_061009057            1614 aa            linear   MAM 02-DEC-2023
DEFINITION  katanin-interacting protein isoform X4 [Dama dama].
ACCESSION   XP_061009057
VERSION     XP_061009057.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153074.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1614
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1614
                     /product="katanin-interacting protein isoform X4"
                     /calculated_mol_wt=179338
     Region          <480..605
                     /region_name="DUF4457"
                     /note="Domain of unknown function (DUF4457); pfam14652"
                     /db_xref="CDD:464238"
     Region          625..>879
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          <960..1104
                     /region_name="DUF4457"
                     /note="Domain of unknown function (DUF4457); pfam14652"
                     /db_xref="CDD:464238"
     Region          1209..1528
                     /region_name="DUF4457"
                     /note="Domain of unknown function (DUF4457); pfam14652"
                     /db_xref="CDD:464238"
     CDS             1..1614
                     /gene="KATNIP"
                     /coded_by="XM_061153074.1:37..4881"
                     /db_xref="GeneID:133063560"
ORIGIN      
        1 mdgqtlrkae rsrscsrekk egytkdmvtd fdekhdeyli llqqknrilk hlktkdpvql
       61 rlehleqgfs vyvngansel kasprkavha dfsrsashte gthdcgrrtl fqeaeealrr
      121 sartapskvq rrgwhqksvq irteagprly iqpppdyaed sepcgdvtvk vkdasgdcpq
      181 elrkslelsv nlqrkekdgs sdeydsieed vlsepepedq vlvgcprdds plsrrysvqk
      241 dfpedqeteg rlpqgpdtlv vlefnpasks nkkernlsak rkdnaevfip skpephlspq
      301 pptmfpdqdr acsrpgsrre rplsatrkpv reaedreeda savlraiqve nealqrails
      361 rkaeppaspp qdtegprakp wtsllkegtp elppittats teeparaagg aravseaidr
      421 igllgsrqqq kllkvlqaie sdsahlsrvv spteeqvldp edksgpkaee ikdaiyvtme
      481 ilsnwgsasw vgiteveffd lnntklyvsp hdvdirntdm pgdlghlvnr nlagkkdpsl
      541 wtcpfhpplq lffvirntgq lrdfgltkik vwnywtadgd fdigaknvkl yvnkklifdg
      601 kldkgggeap nsilvglqde rmeksdaall eesrgvretp gtegdeelrt shsepagaae
      661 dakvssqgnl fggrmsspdg vkdslsrsee elsvsaapss vggepsgpph sppvecpapp
      721 dqelsllrql gnltgrkvse ppgktpswlq pspagkgrkp ggpklkplwl spekpldgrd
      781 glpsddvige gpgvseardk gprreqgrls swnviaaera qrttpkvhgd dfdifnqpph
      841 reqpasgrrg lrrdalslsh gdgqpassed twstqmpprp rwhseqehtl heswdsltaf
      901 drshrgrisn mefqgdilde flqqqkssrq sdqpppwkee kpepvkgqdh gsletddggd
      961 fkipvlpygq hlvidikstw gdrhyvglng ieifsskgep vrveniqadp pdinilpayg
     1021 rdprvvsnli dgvnrtqddm hvwlapftpg kshsismdfa qpcqvaliri wnynksrihs
     1081 frgvkditml ldaqcifkge iakasgtltg apehfgdtil fttdddilea ifcsdatfdl
     1141 dveslcslqs eealrrpsta dgqgeerpyt qagswaddrg lepelppgpp vpdvttpepg
     1201 vyygiclqln ftaswgdlhy lgltglevvg qdgqalpinp qqisasprdl ndlpeytdds
     1261 rtldklidga nitmedehmw lipfspgldh vvtirfdrae siaglrfwny nkspedtyrg
     1321 akivhvsldg lcvsppegfl irkgpghchf dfaqeilfvd ylqarplppp vqrldtksle
     1381 rasmdyeapp mpcgfifqfq lltswgdpyy igltglelyd ergekiplse nniaafpdsv
     1441 nslegvcgdv rtpdklidqv nntsdgrhmw lapilpglvn rvyvifdlpt tvsmiklwny
     1501 aktphrgvke fgllvddllv yngilamvgh liggilptce ptlpyhtilf tedtdichqe
     1561 khttisnqve dqdvqmmnen qivtnskrkq naadpalrpk tciseketar rwrc
//
LOCUS       XP_061009058            1125 aa            linear   MAM 02-DEC-2023
DEFINITION  exportin-6 isoform X1 [Dama dama].
ACCESSION   XP_061009058
VERSION     XP_061009058.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153075.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1125
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1125
                     /product="exportin-6 isoform X1"
                     /calculated_mol_wt=128752
     Region          31..96
                     /region_name="IBN_N"
                     /note="Importin-beta N-terminal domain; smart00913"
                     /db_xref="CDD:197981"
     Region          103..253
                     /region_name="Xpo1"
                     /note="Exportin 1-like protein; pfam08389"
                     /db_xref="CDD:462459"
     CDS             1..1125
                     /gene="XPO6"
                     /coded_by="XM_061153075.1:538..3915"
                     /db_xref="GeneID:133063561"
ORIGIN      
        1 maseeaslra lenlmteffh dcttnerkre ieellnnfaq qigawrfcly flsstrndyv
       61 mmysltvfen linkmwlgvp sqdkmeirsc lpklllahhk tlpyfirnkl ckvivdigrq
      121 dwpmfyhdff tnilqliqsp vttplgliml kttseelacp redlsvarke elrkllldqv
      181 qtvlglltgi letvwdkhsv taatpppspt sgesgdllsn llqspssakl lnqpipilda
      241 eseyicslal eclahlfswi plsasitpsl lttifhfarf gcdirarkma svngssqncv
      301 lgqergrlgv lamscinelm skncvpmefe eyllrmfqqt fyllqkitkd nnahtvksrl
      361 eeldesyiek ftdflrlfvs vhlrriesys qfpvvefltl lfkytfhqpt hegyfscldi
      421 wtlfldylts kiksrlgdke avlnryedal vllltevlnr iqfrynqaql eelddetldd
      481 dqqtewqryl rqslevvakv mellpthafs tlfpvlqdnl evylglqqfi vtsgsgprln
      541 itaendcrrl hcslrdlssl lqavgrlaey figdvfaarf sdaltvverl vkvtlygsqi
      601 klynietavp svlkpdlidv haqslaalqa yshwlaqycs eahrqntqqf islisttmda
      661 vtplittkvq dklllsachl lvslattvrp vflisipavq kvfnritdas sqrlvdkaqv
      721 lvcralsnil llpwpnlpen eqqwpvrsmn haslisalsr dyrnlkpsav tpqrkmpldd
      781 tkviihqtls vledivenis gestksrqic yqslqesvqv slalfpafih qsdvtdemls
      841 ffltlfrglr vqmgvpfteq iiqtflnmft reqlaesilh egstgcrvve kflkilqvvv
      901 qepgqvfkpf lpsiialcme qvypiiaerp spdvkaelfe llfrtlhhnw ryffkstvla
      961 svqrgmaeeq menqpqfsai mqafgqsflq pdihlfkqnl fyletlntkq klyhkkifrs
     1021 amlfqfvnvl lqvlvhrshd llqedigiav ynmasvdfdg fftgflpefl sscdgvdanq
     1081 knvlgrnfkm drdlpsftqs vhrlvndlry yrlcndslpp gtvkl
//
LOCUS       XP_061009059            1124 aa            linear   MAM 02-DEC-2023
DEFINITION  exportin-6 isoform X2 [Dama dama].
ACCESSION   XP_061009059
VERSION     XP_061009059.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153076.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1124
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1124
                     /product="exportin-6 isoform X2"
                     /calculated_mol_wt=128624
     Region          31..96
                     /region_name="IBN_N"
                     /note="Importin-beta N-terminal domain; smart00913"
                     /db_xref="CDD:197981"
     Region          103..253
                     /region_name="Xpo1"
                     /note="Exportin 1-like protein; pfam08389"
                     /db_xref="CDD:462459"
     CDS             1..1124
                     /gene="XPO6"
                     /coded_by="XM_061153076.1:538..3912"
                     /db_xref="GeneID:133063561"
ORIGIN      
        1 maseeaslra lenlmteffh dcttnerkre ieellnnfaq qigawrfcly flsstrndyv
       61 mmysltvfen linkmwlgvp sqdkmeirsc lpklllahhk tlpyfirnkl ckvivdigrq
      121 dwpmfyhdff tnilqliqsp vttplgliml kttseelacp redlsvarke elrkllldqv
      181 qtvlglltgi letvwdkhsv taatpppspt sgesgdllsn llqspssakl lnqpipilda
      241 eseyicslal eclahlfswi plsasitpsl lttifhfarf gcdirarkma svngssqncv
      301 lgqergrlgv lamscinelm skncvpmefe eyllrmfqqt fyllqkitkd nnahtvksrl
      361 eeldesyiek ftdflrlfvs vhlrriesys qfpvvefltl lfkytfhqpt hegyfscldi
      421 wtlfldylts kiksrlgdke avlnryedal vllltevlnr iqfrynqaql eelddetldd
      481 dqtewqrylr qslevvakvm ellpthafst lfpvlqdnle vylglqqfiv tsgsgprlni
      541 taendcrrlh cslrdlssll qavgrlaeyf igdvfaarfs daltvverlv kvtlygsqik
      601 lynietavps vlkpdlidvh aqslaalqay shwlaqycse ahrqntqqfi slisttmdav
      661 tplittkvqd klllsachll vslattvrpv flisipavqk vfnritdass qrlvdkaqvl
      721 vcralsnill lpwpnlpene qqwpvrsmnh aslisalsrd yrnlkpsavt pqrkmplddt
      781 kviihqtlsv ledivenisg estksrqicy qslqesvqvs lalfpafihq sdvtdemlsf
      841 fltlfrglrv qmgvpfteqi iqtflnmftr eqlaesilhe gstgcrvvek flkilqvvvq
      901 epgqvfkpfl psiialcmeq vypiiaerps pdvkaelfel lfrtlhhnwr yffkstvlas
      961 vqrgmaeeqm enqpqfsaim qafgqsflqp dihlfkqnlf yletlntkqk lyhkkifrsa
     1021 mlfqfvnvll qvlvhrshdl lqedigiavy nmasvdfdgf ftgflpefls scdgvdanqk
     1081 nvlgrnfkmd rdlpsftqsv hrlvndlryy rlcndslppg tvkl
//
LOCUS       XP_061009060            1059 aa            linear   MAM 02-DEC-2023
DEFINITION  exportin-6 isoform X3 [Dama dama].
ACCESSION   XP_061009060
VERSION     XP_061009060.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153077.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1059
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1059
                     /product="exportin-6 isoform X3"
                     /calculated_mol_wt=120841
     Region          58..187
                     /region_name="Xpo1"
                     /note="Exportin 1-like protein; pfam08389"
                     /db_xref="CDD:462459"
     CDS             1..1059
                     /gene="XPO6"
                     /coded_by="XM_061153077.1:539..3718"
                     /db_xref="GeneID:133063561"
ORIGIN      
        1 maseeaslra lenlmteffh dcttnerkre ieellnnfaq qigawrfcly flsstrndyv
       61 mmysltvfel iqspvttplg limlkttsee lacpredlsv arkeelrkll ldqvqtvlgl
      121 ltgiletvwd khsvtaatpp psptsgesgd llsnllqsps sakllnqpip ildaeseyic
      181 slaleclahl fswiplsasi tpsllttifh farfgcdira rkmasvngss qncvlgqerg
      241 rlgvlamsci nelmskncvp mefeeyllrm fqqtfyllqk itkdnnahtv ksrleeldes
      301 yiekftdflr lfvsvhlrri esysqfpvve fltllfkytf hqpthegyfs cldiwtlfld
      361 yltskiksrl gdkeavlnry edalvlllte vlnriqfryn qaqleeldde tldddqqtew
      421 qrylrqslev vakvmellpt hafstlfpvl qdnlevylgl qqfivtsgsg prlnitaend
      481 crrlhcslrd lssllqavgr laeyfigdvf aarfsdaltv verlvkvtly gsqiklynie
      541 tavpsvlkpd lidvhaqsla alqayshwla qycseahrqn tqqfislist tmdavtplit
      601 tkvqdkllls achllvslat tvrpvflisi pavqkvfnri tdassqrlvd kaqvlvcral
      661 snilllpwpn lpeneqqwpv rsmnhaslis alsrdyrnlk psavtpqrkm plddtkviih
      721 qtlsvlediv enisgestks rqicyqslqe svqvslalfp afihqsdvtd emlsffltlf
      781 rglrvqmgvp fteqiiqtfl nmftreqlae silhegstgc rvvekflkil qvvvqepgqv
      841 fkpflpsiia lcmeqvypii aerpspdvka elfellfrtl hhnwryffks tvlasvqrgm
      901 aeeqmenqpq fsaimqafgq sflqpdihlf kqnlfyletl ntkqklyhkk ifrsamlfqf
      961 vnvllqvlvh rshdllqedi giavynmasv dfdgfftgfl peflsscdgv danqknvlgr
     1021 nfkmdrdlps ftqsvhrlvn dlryyrlcnd slppgtvkl
//
LOCUS       XP_061009061             278 aa            linear   MAM 02-DEC-2023
DEFINITION  linker for activation of T-cells family member 1 isoform X1 [Dama
            dama].
ACCESSION   XP_061009061
VERSION     XP_061009061.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153078.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..278
                     /product="linker for activation of T-cells family member 1
                     isoform X1"
                     /calculated_mol_wt=29258
     Region          1..278
                     /region_name="LAT"
                     /note="Linker for activation of T-cells; pfam15234"
                     /db_xref="CDD:464576"
     CDS             1..278
                     /gene="LAT"
                     /coded_by="XM_061153078.1:326..1162"
                     /db_xref="GeneID:133063564"
ORIGIN      
        1 meavslavyv lgplllplla vllmalcvrc relpdaespi lhhplpssps fpasralssp
       61 gsydtavsds ltpssimikl pptlvprpsa tpyplqsqpd llpiprspqp lggshrmass
      121 rqdsdsansv asyenegvtg tpvapagrrl rpvlgstdpv slppeaaced adeddddynn
      181 egylvvlpdr dpatstgnav spapasskpg lrdsafsmes gedyvnvpes eesadaslng
      241 sreyvnvsqe lqpgaktkpd tqnsqevede eapdyenl
//
LOCUS       XP_061009062             277 aa            linear   MAM 02-DEC-2023
DEFINITION  linker for activation of T-cells family member 1 isoform X2 [Dama
            dama].
ACCESSION   XP_061009062
VERSION     XP_061009062.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153079.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..277
                     /product="linker for activation of T-cells family member 1
                     isoform X2"
                     /calculated_mol_wt=29102
     Region          1..277
                     /region_name="LAT"
                     /note="Linker for activation of T-cells; pfam15234"
                     /db_xref="CDD:464576"
     CDS             1..277
                     /gene="LAT"
                     /coded_by="XM_061153079.1:327..1160"
                     /db_xref="GeneID:133063564"
ORIGIN      
        1 meavslavyv lgplllplla vllmalcvrc relpdaespi lhhplpssps fpasralssp
       61 gsydtavsds ltpssimikl pptlvprpsa tpyplqsqpd llpipspqpl ggshrmassr
      121 qdsdsansva syenegvtgt pvapagrrlr pvlgstdpvs lppeaaceda deddddynne
      181 gylvvlpdrd patstgnavs papasskpgl rdsafsmesg edyvnvpese esadaslngs
      241 reyvnvsqel qpgaktkpdt qnsqevedee apdyenl
//
LOCUS       XP_061009063             252 aa            linear   MAM 02-DEC-2023
DEFINITION  linker for activation of T-cells family member 1 isoform X3 [Dama
            dama].
ACCESSION   XP_061009063
VERSION     XP_061009063.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153080.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..252
                     /product="linker for activation of T-cells family member 1
                     isoform X3"
                     /calculated_mol_wt=26578
     Region          27..252
                     /region_name="LAT"
                     /note="Linker for activation of T-cells; pfam15234"
                     /db_xref="CDD:464576"
     CDS             1..252
                     /gene="LAT"
                     /coded_by="XM_061153080.1:325..1083"
                     /db_xref="GeneID:133063564"
ORIGIN      
        1 meavslavyv lgplllplla vllmalcvrc relpgsydta vsdsltpssi miklpptlvp
       61 rpsatpyplq sqpdllpipr spqplggshr massrqdsds ansvasyene gvtgtpvapa
      121 grrlrpvlgs tdpvslppea acedadeddd dynnegylvv lpdrdpatst gnavspapas
      181 skpglrdsaf smesgedyvn vpeseesada slngsreyvn vsqelqpgak tkpdtqnsqe
      241 vedeeapdye nl
//
LOCUS       XP_061009064             250 aa            linear   MAM 02-DEC-2023
DEFINITION  linker for activation of T-cells family member 1 isoform X4 [Dama
            dama].
ACCESSION   XP_061009064
VERSION     XP_061009064.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153081.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..250
                     /product="linker for activation of T-cells family member 1
                     isoform X4"
                     /calculated_mol_wt=26508
     Region          27..250
                     /region_name="LAT"
                     /note="Linker for activation of T-cells; pfam15234"
                     /db_xref="CDD:464576"
     CDS             1..250
                     /gene="LAT"
                     /coded_by="XM_061153081.1:328..1080"
                     /db_xref="GeneID:133063564"
ORIGIN      
        1 meavslavyv lgplllplla vllmalcvrc relpdaespi lhhplpssps fpasralssp
       61 gsydtavsds ltpssimikl pptlvprpsa tpyplqsqpd llpiprspqp lggshrmass
      121 rqdsdsansv asyeneeaac edadeddddy nnegylvvlp drdpatstgn avspapassk
      181 pglrdsafsm esgedyvnvp eseesadasl ngsreyvnvs qelqpgaktk pdtqnsqeve
      241 deeapdyenl
//
LOCUS       XP_061009065             249 aa            linear   MAM 02-DEC-2023
DEFINITION  linker for activation of T-cells family member 1 isoform X5 [Dama
            dama].
ACCESSION   XP_061009065
VERSION     XP_061009065.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153082.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..249
                     /product="linker for activation of T-cells family member 1
                     isoform X5"
                     /calculated_mol_wt=26352
     Region          27..249
                     /region_name="LAT"
                     /note="Linker for activation of T-cells; pfam15234"
                     /db_xref="CDD:464576"
     CDS             1..249
                     /gene="LAT"
                     /coded_by="XM_061153082.1:328..1077"
                     /db_xref="GeneID:133063564"
ORIGIN      
        1 meavslavyv lgplllplla vllmalcvrc relpdaespi lhhplpssps fpasralssp
       61 gsydtavsds ltpssimikl pptlvprpsa tpyplqsqpd llpipspqpl ggshrmassr
      121 qdsdsansva syeneeaace dadeddddyn negylvvlpd rdpatstgna vspapasskp
      181 glrdsafsme sgedyvnvpe seesadasln gsreyvnvsq elqpgaktkp dtqnsqeved
      241 eeapdyenl
//
LOCUS       XP_061009066             528 aa            linear   MAM 02-DEC-2023
DEFINITION  protein spinster homolog 1 [Dama dama].
ACCESSION   XP_061009066
VERSION     XP_061009066.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153083.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..528
                     /product="protein spinster homolog 1"
                     /calculated_mol_wt=56528
     Region          62..479
                     /region_name="MFS_spinster_like"
                     /note="Protein spinster and spinster homologs of the Major
                     Facilitator Superfamily of transporters; cd17328"
                     /db_xref="CDD:340886"
     Site            order(72..73,76..77,80,112,164..165,167..169,172,192,
                     195..196,199,280,283..284,287..289,292,333,337,390..391,
                     395,399,419,422..423,426..427,430)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340886"
     CDS             1..528
                     /gene="SPNS1"
                     /coded_by="XM_061153083.1:373..1959"
                     /db_xref="GeneID:133063565"
ORIGIN      
        1 msgsdtapfl sqaddtddgp apgtpglpgs mgnpksedpe vpdqeglqri tglssgrsal
       61 ivavlcyinl lnymdrftva gvlpdieqff digdgssgli qtvfissymv lapvfgylgd
      121 rynrkylmcg giafwslvtl gssfiprerf wlllltrglv gvgeasysti aptliadlfv
      181 adqrsrmlsv fyfaipvgsg lgyiagskvk dvagdwhwal rvtpglgvla vvllflvvre
      241 pprgaverhs dspplnptsw wadlralarn psfilsslgf tavafvtgsl alwapafllr
      301 srvvlgetpp clpgdscsss dslifglitc ltgvlgvglg veisrrlrrs npradplvca
      361 agllgsapfl flslacargs ivatyififi getllsmnwa ivadillyvv iptrrstaea
      421 fqivlshllg dagspyligs isdrlrrdwp psflsefral qfslmlcafv galggaaflg
      481 taifiesdrr qaqlhvqgll peaestddri vvpqrgrstr vpvssvli
//
LOCUS       XP_061009067             417 aa            linear   MAM 02-DEC-2023
DEFINITION  NFATC2-interacting protein [Dama dama].
ACCESSION   XP_061009067
VERSION     XP_061009067.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153084.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..417
                     /product="NFATC2-interacting protein"
                     /calculated_mol_wt=45285
     Region          261..333
                     /region_name="Ubl_SLD1_NFATC2ip"
                     /note="SUMO-like domain 1 (SLD1), structurally similar to
                     a beta-grasp ubiquitin-like fold, found in nuclear factor
                     of activated T-cells 2 interacting protein (NFATC2ip) and
                     similar proteins; cd17078"
                     /db_xref="CDD:340598"
     Region          344..416
                     /region_name="Ubl_SLD2_NFATC2ip"
                     /note="SUMO-like domain 2 (SLD2), structurally similar to
                     a beta-grasp ubiquitin-like fold, found in nuclear factor
                     of activated T-cells 2 interacting protein (NFATC2ip) and
                     similar proteins; cd17079"
                     /db_xref="CDD:340599"
     CDS             1..417
                     /gene="NFATC2IP"
                     /coded_by="XM_061153084.1:55..1308"
                     /db_xref="GeneID:133063567"
ORIGIN      
        1 maepvrrrgc prgggvgrra rgsrggrsrr pgaqrsparh tldsvlvdlv sdsdedvlev
       61 atargaaaaa evplpespvp aasrddsdsd segadaepgg aprvlvrrrr rllldpgeap
      121 avpvysekvk sslhlipdnv sllklcppea eeeadveeas sphtvdfpcp sspwkkklrs
      181 kdgeekkkml laqdtsplps plprtkskkh tqalrklrev nkrlqdlrsc lspkqsqgqd
      241 hlsqedevvl veeptlpehp rllplkircr adlvrlpirm seplksvvdh maahlgvsps
      301 rilllfgete lsptatpktl klgvadiidc vvlasspeaa etsqllqlrv qgkekhqtle
      361 vslphdsplk tlmsryeeam glsghklsff fdgtklsgke lpadlgmesg dlievwg
//
LOCUS       XP_061009068             566 aa            linear   MAM 02-DEC-2023
DEFINITION  B-lymphocyte antigen CD19 [Dama dama].
ACCESSION   XP_061009068
VERSION     XP_061009068.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153085.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..566
                     /product="B-lymphocyte antigen CD19"
                     /calculated_mol_wt=61715
     Region          22..120
                     /region_name="CD19_protodomain_1_2"
                     /note="CD19 (Cluster of Differentiation 19), a unique
                     double immunoglobulin (Ig)-fold protodomain 1 and 2;
                     cd23999"
                     /db_xref="CDD:467826"
     Region          22..64
                     /region_name="protodomain 1"
                     /note="protodomain 1 [structural motif]"
                     /db_xref="CDD:467826"
     Region          22..27
                     /region_name="strand A'"
                     /note="strand A' [structural motif]"
                     /db_xref="CDD:467826"
     Region          29..36
                     /region_name="strand B"
                     /note="strand B [structural motif]"
                     /db_xref="CDD:467826"
     Site            order(31,33,35,86,88,90,116)
                     /site_type="other"
                     /note="CD81 binding site [polypeptide binding]"
                     /db_xref="CDD:467826"
     Region          37..46
                     /region_name="CDR1"
                     /note="CDR1 [structural motif]"
                     /db_xref="CDD:467826"
     Region          46..53
                     /region_name="strand C"
                     /note="strand C [structural motif]"
                     /db_xref="CDD:467826"
     Region          60..64
                     /region_name="strand C'"
                     /note="strand C' [structural motif]"
                     /db_xref="CDD:467826"
     Region          65..68
                     /region_name="CDR2"
                     /note="CDR2 [structural motif]"
                     /db_xref="CDD:467826"
     Region          68..120
                     /region_name="protodomain 2"
                     /note="protodomain 2 [structural motif]"
                     /db_xref="CDD:467826"
     Region          68..72
                     /region_name="strand D"
                     /note="strand D [structural motif]"
                     /db_xref="CDD:467826"
     Region          85..90
                     /region_name="strand E"
                     /note="strand E [structural motif]"
                     /db_xref="CDD:467826"
     Region          96..104
                     /region_name="strand F"
                     /note="strand F [structural motif]"
                     /db_xref="CDD:467826"
     Site            101
                     /site_type="other"
                     /note="antibody binding site [polypeptide binding]"
                     /db_xref="CDD:467826"
     Region          105..112
                     /region_name="CDR3"
                     /note="CDR3 [structural motif]"
                     /db_xref="CDD:467826"
     Region          115..120
                     /region_name="strand G"
                     /note="strand G [structural motif]"
                     /db_xref="CDD:467826"
     Region          192..285
                     /region_name="CD19_double_Ig"
                     /note="CD19 (Cluster of Differentiation 19), a unique
                     double immunoglobulin (Ig)-fold domain; cl49627"
                     /db_xref="CDD:483967"
     Region          192..237
                     /region_name="protodomain 1+3"
                     /note="protodomain 1+3 [structural motif]"
                     /db_xref="CDD:467824"
     Region          192..196
                     /region_name="strand A'"
                     /note="strand A' [structural motif]"
                     /db_xref="CDD:467824"
     Region          198..205
                     /region_name="strand B"
                     /note="strand B [structural motif]"
                     /db_xref="CDD:467824"
     Site            order(200,202,204,237,256,258,260,265,281)
                     /site_type="other"
                     /note="CD81 binding site [polypeptide binding]"
                     /db_xref="CDD:467824"
     Region          206..215
                     /region_name="CDR1"
                     /note="CDR1 [structural motif]"
                     /db_xref="CDD:467824"
     Region          215..222
                     /region_name="strand C"
                     /note="strand C [structural motif]"
                     /db_xref="CDD:467824"
     Site            order(222,271)
                     /site_type="other"
                     /note="antibody binding site [polypeptide binding]"
                     /db_xref="CDD:467824"
     Region          232..236
                     /region_name="strand C'"
                     /note="strand C' [structural motif]"
                     /db_xref="CDD:467824"
     Region          237..244
                     /region_name="CDR2"
                     /note="CDR2 [structural motif]"
                     /db_xref="CDD:467824"
     Region          244..285
                     /region_name="protodomain 2+4"
                     /note="protodomain 2+4 [structural motif]"
                     /db_xref="CDD:467824"
     Region          244..248
                     /region_name="strand D"
                     /note="strand D [structural motif]"
                     /db_xref="CDD:467824"
     Region          255..260
                     /region_name="strand E"
                     /note="strand E [structural motif]"
                     /db_xref="CDD:467824"
     Region          266..274
                     /region_name="strand F"
                     /note="strand F [structural motif]"
                     /db_xref="CDD:467824"
     Region          274..280
                     /region_name="CDR3"
                     /note="CDR3 [structural motif]"
                     /db_xref="CDD:467824"
     Region          280..285
                     /region_name="strand G"
                     /note="strand G [structural motif]"
                     /db_xref="CDD:467824"
     CDS             1..566
                     /gene="CD19"
                     /coded_by="XM_061153085.1:61..1761"
                     /db_xref="GeneID:133063569"
ORIGIN      
        1 mpppllfllf ltpmgvrped prlveakegg navlpclegs sdgppehlaw frgsqlkpfl
       61 elslglpglg ihvgplgtlk epqgtllflf nvskhmggfy lcqsglpseq gwqpgwtvsv
      121 kdsgklfrwn asdlsdlgcd sgnistgrkp ssghltksql hvwgwdhfke ishtetacap
      181 snstlnqsnn rdltvapgst lllscgasrt slvrgsvswi hkypmkpdvk llslnvseha
      241 qhremwvmgt lggkvvlllp eataqdadty rcnhgnkttq mqlkvtaqsv whwlletgvw
      301 kvpvatliyl ifcltslvgf lyfrralilr rkrkrmtdpt rrffkvtppp gngassqygn
      361 mlslsmphsg tgralrwaag lgaaapsygn prsdvqeara agsrsppgtg peeeegeaye
      421 epdseegsef yendsklgqd qlsqdgsgye npeegsldpq dedsfsngae syenedeela
      481 ptvtrttdfl sphgsawdps reatslgsqs yedmrgilya apqlrfvraq pganheedad
      541 syenmdnpdg pepawgggar igwstr
//
LOCUS       XP_061009070             566 aa            linear   MAM 02-DEC-2023
DEFINITION  B-lymphocyte antigen CD19 [Dama dama].
ACCESSION   XP_061009070
VERSION     XP_061009070.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153087.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..566
                     /product="B-lymphocyte antigen CD19"
                     /calculated_mol_wt=61715
     Region          22..120
                     /region_name="CD19_protodomain_1_2"
                     /note="CD19 (Cluster of Differentiation 19), a unique
                     double immunoglobulin (Ig)-fold protodomain 1 and 2;
                     cd23999"
                     /db_xref="CDD:467826"
     Region          22..64
                     /region_name="protodomain 1"
                     /note="protodomain 1 [structural motif]"
                     /db_xref="CDD:467826"
     Region          22..27
                     /region_name="strand A'"
                     /note="strand A' [structural motif]"
                     /db_xref="CDD:467826"
     Region          29..36
                     /region_name="strand B"
                     /note="strand B [structural motif]"
                     /db_xref="CDD:467826"
     Site            order(31,33,35,86,88,90,116)
                     /site_type="other"
                     /note="CD81 binding site [polypeptide binding]"
                     /db_xref="CDD:467826"
     Region          37..46
                     /region_name="CDR1"
                     /note="CDR1 [structural motif]"
                     /db_xref="CDD:467826"
     Region          46..53
                     /region_name="strand C"
                     /note="strand C [structural motif]"
                     /db_xref="CDD:467826"
     Region          60..64
                     /region_name="strand C'"
                     /note="strand C' [structural motif]"
                     /db_xref="CDD:467826"
     Region          65..68
                     /region_name="CDR2"
                     /note="CDR2 [structural motif]"
                     /db_xref="CDD:467826"
     Region          68..120
                     /region_name="protodomain 2"
                     /note="protodomain 2 [structural motif]"
                     /db_xref="CDD:467826"
     Region          68..72
                     /region_name="strand D"
                     /note="strand D [structural motif]"
                     /db_xref="CDD:467826"
     Region          85..90
                     /region_name="strand E"
                     /note="strand E [structural motif]"
                     /db_xref="CDD:467826"
     Region          96..104
                     /region_name="strand F"
                     /note="strand F [structural motif]"
                     /db_xref="CDD:467826"
     Site            101
                     /site_type="other"
                     /note="antibody binding site [polypeptide binding]"
                     /db_xref="CDD:467826"
     Region          105..112
                     /region_name="CDR3"
                     /note="CDR3 [structural motif]"
                     /db_xref="CDD:467826"
     Region          115..120
                     /region_name="strand G"
                     /note="strand G [structural motif]"
                     /db_xref="CDD:467826"
     Region          192..285
                     /region_name="CD19_double_Ig"
                     /note="CD19 (Cluster of Differentiation 19), a unique
                     double immunoglobulin (Ig)-fold domain; cl49627"
                     /db_xref="CDD:483967"
     Region          192..237
                     /region_name="protodomain 1+3"
                     /note="protodomain 1+3 [structural motif]"
                     /db_xref="CDD:467824"
     Region          192..196
                     /region_name="strand A'"
                     /note="strand A' [structural motif]"
                     /db_xref="CDD:467824"
     Region          198..205
                     /region_name="strand B"
                     /note="strand B [structural motif]"
                     /db_xref="CDD:467824"
     Site            order(200,202,204,237,256,258,260,265,281)
                     /site_type="other"
                     /note="CD81 binding site [polypeptide binding]"
                     /db_xref="CDD:467824"
     Region          206..215
                     /region_name="CDR1"
                     /note="CDR1 [structural motif]"
                     /db_xref="CDD:467824"
     Region          215..222
                     /region_name="strand C"
                     /note="strand C [structural motif]"
                     /db_xref="CDD:467824"
     Site            order(222,271)
                     /site_type="other"
                     /note="antibody binding site [polypeptide binding]"
                     /db_xref="CDD:467824"
     Region          232..236
                     /region_name="strand C'"
                     /note="strand C' [structural motif]"
                     /db_xref="CDD:467824"
     Region          237..244
                     /region_name="CDR2"
                     /note="CDR2 [structural motif]"
                     /db_xref="CDD:467824"
     Region          244..285
                     /region_name="protodomain 2+4"
                     /note="protodomain 2+4 [structural motif]"
                     /db_xref="CDD:467824"
     Region          244..248
                     /region_name="strand D"
                     /note="strand D [structural motif]"
                     /db_xref="CDD:467824"
     Region          255..260
                     /region_name="strand E"
                     /note="strand E [structural motif]"
                     /db_xref="CDD:467824"
     Region          266..274
                     /region_name="strand F"
                     /note="strand F [structural motif]"
                     /db_xref="CDD:467824"
     Region          274..280
                     /region_name="CDR3"
                     /note="CDR3 [structural motif]"
                     /db_xref="CDD:467824"
     Region          280..285
                     /region_name="strand G"
                     /note="strand G [structural motif]"
                     /db_xref="CDD:467824"
     CDS             1..566
                     /gene="CD19"
                     /coded_by="XM_061153087.1:61..1761"
                     /db_xref="GeneID:133063569"
ORIGIN      
        1 mpppllfllf ltpmgvrped prlveakegg navlpclegs sdgppehlaw frgsqlkpfl
       61 elslglpglg ihvgplgtlk epqgtllflf nvskhmggfy lcqsglpseq gwqpgwtvsv
      121 kdsgklfrwn asdlsdlgcd sgnistgrkp ssghltksql hvwgwdhfke ishtetacap
      181 snstlnqsnn rdltvapgst lllscgasrt slvrgsvswi hkypmkpdvk llslnvseha
      241 qhremwvmgt lggkvvlllp eataqdadty rcnhgnkttq mqlkvtaqsv whwlletgvw
      301 kvpvatliyl ifcltslvgf lyfrralilr rkrkrmtdpt rrffkvtppp gngassqygn
      361 mlslsmphsg tgralrwaag lgaaapsygn prsdvqeara agsrsppgtg peeeegeaye
      421 epdseegsef yendsklgqd qlsqdgsgye npeegsldpq dedsfsngae syenedeela
      481 ptvtrttdfl sphgsawdps reatslgsqs yedmrgilya apqlrfvraq pganheedad
      541 syenmdnpdg pepawgggar igwstr
//
LOCUS       XP_061009071             566 aa            linear   MAM 02-DEC-2023
DEFINITION  B-lymphocyte antigen CD19 [Dama dama].
ACCESSION   XP_061009071
VERSION     XP_061009071.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153088.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..566
                     /product="B-lymphocyte antigen CD19"
                     /calculated_mol_wt=61715
     Region          22..120
                     /region_name="CD19_protodomain_1_2"
                     /note="CD19 (Cluster of Differentiation 19), a unique
                     double immunoglobulin (Ig)-fold protodomain 1 and 2;
                     cd23999"
                     /db_xref="CDD:467826"
     Region          22..64
                     /region_name="protodomain 1"
                     /note="protodomain 1 [structural motif]"
                     /db_xref="CDD:467826"
     Region          22..27
                     /region_name="strand A'"
                     /note="strand A' [structural motif]"
                     /db_xref="CDD:467826"
     Region          29..36
                     /region_name="strand B"
                     /note="strand B [structural motif]"
                     /db_xref="CDD:467826"
     Site            order(31,33,35,86,88,90,116)
                     /site_type="other"
                     /note="CD81 binding site [polypeptide binding]"
                     /db_xref="CDD:467826"
     Region          37..46
                     /region_name="CDR1"
                     /note="CDR1 [structural motif]"
                     /db_xref="CDD:467826"
     Region          46..53
                     /region_name="strand C"
                     /note="strand C [structural motif]"
                     /db_xref="CDD:467826"
     Region          60..64
                     /region_name="strand C'"
                     /note="strand C' [structural motif]"
                     /db_xref="CDD:467826"
     Region          65..68
                     /region_name="CDR2"
                     /note="CDR2 [structural motif]"
                     /db_xref="CDD:467826"
     Region          68..120
                     /region_name="protodomain 2"
                     /note="protodomain 2 [structural motif]"
                     /db_xref="CDD:467826"
     Region          68..72
                     /region_name="strand D"
                     /note="strand D [structural motif]"
                     /db_xref="CDD:467826"
     Region          85..90
                     /region_name="strand E"
                     /note="strand E [structural motif]"
                     /db_xref="CDD:467826"
     Region          96..104
                     /region_name="strand F"
                     /note="strand F [structural motif]"
                     /db_xref="CDD:467826"
     Site            101
                     /site_type="other"
                     /note="antibody binding site [polypeptide binding]"
                     /db_xref="CDD:467826"
     Region          105..112
                     /region_name="CDR3"
                     /note="CDR3 [structural motif]"
                     /db_xref="CDD:467826"
     Region          115..120
                     /region_name="strand G"
                     /note="strand G [structural motif]"
                     /db_xref="CDD:467826"
     Region          192..285
                     /region_name="CD19_double_Ig"
                     /note="CD19 (Cluster of Differentiation 19), a unique
                     double immunoglobulin (Ig)-fold domain; cl49627"
                     /db_xref="CDD:483967"
     Region          192..237
                     /region_name="protodomain 1+3"
                     /note="protodomain 1+3 [structural motif]"
                     /db_xref="CDD:467824"
     Region          192..196
                     /region_name="strand A'"
                     /note="strand A' [structural motif]"
                     /db_xref="CDD:467824"
     Region          198..205
                     /region_name="strand B"
                     /note="strand B [structural motif]"
                     /db_xref="CDD:467824"
     Site            order(200,202,204,237,256,258,260,265,281)
                     /site_type="other"
                     /note="CD81 binding site [polypeptide binding]"
                     /db_xref="CDD:467824"
     Region          206..215
                     /region_name="CDR1"
                     /note="CDR1 [structural motif]"
                     /db_xref="CDD:467824"
     Region          215..222
                     /region_name="strand C"
                     /note="strand C [structural motif]"
                     /db_xref="CDD:467824"
     Site            order(222,271)
                     /site_type="other"
                     /note="antibody binding site [polypeptide binding]"
                     /db_xref="CDD:467824"
     Region          232..236
                     /region_name="strand C'"
                     /note="strand C' [structural motif]"
                     /db_xref="CDD:467824"
     Region          237..244
                     /region_name="CDR2"
                     /note="CDR2 [structural motif]"
                     /db_xref="CDD:467824"
     Region          244..285
                     /region_name="protodomain 2+4"
                     /note="protodomain 2+4 [structural motif]"
                     /db_xref="CDD:467824"
     Region          244..248
                     /region_name="strand D"
                     /note="strand D [structural motif]"
                     /db_xref="CDD:467824"
     Region          255..260
                     /region_name="strand E"
                     /note="strand E [structural motif]"
                     /db_xref="CDD:467824"
     Region          266..274
                     /region_name="strand F"
                     /note="strand F [structural motif]"
                     /db_xref="CDD:467824"
     Region          274..280
                     /region_name="CDR3"
                     /note="CDR3 [structural motif]"
                     /db_xref="CDD:467824"
     Region          280..285
                     /region_name="strand G"
                     /note="strand G [structural motif]"
                     /db_xref="CDD:467824"
     CDS             1..566
                     /gene="CD19"
                     /coded_by="XM_061153088.1:61..1761"
                     /db_xref="GeneID:133063569"
ORIGIN      
        1 mpppllfllf ltpmgvrped prlveakegg navlpclegs sdgppehlaw frgsqlkpfl
       61 elslglpglg ihvgplgtlk epqgtllflf nvskhmggfy lcqsglpseq gwqpgwtvsv
      121 kdsgklfrwn asdlsdlgcd sgnistgrkp ssghltksql hvwgwdhfke ishtetacap
      181 snstlnqsnn rdltvapgst lllscgasrt slvrgsvswi hkypmkpdvk llslnvseha
      241 qhremwvmgt lggkvvlllp eataqdadty rcnhgnkttq mqlkvtaqsv whwlletgvw
      301 kvpvatliyl ifcltslvgf lyfrralilr rkrkrmtdpt rrffkvtppp gngassqygn
      361 mlslsmphsg tgralrwaag lgaaapsygn prsdvqeara agsrsppgtg peeeegeaye
      421 epdseegsef yendsklgqd qlsqdgsgye npeegsldpq dedsfsngae syenedeela
      481 ptvtrttdfl sphgsawdps reatslgsqs yedmrgilya apqlrfvraq pganheedad
      541 syenmdnpdg pepawgggar igwstr
//
LOCUS       XP_061009072             566 aa            linear   MAM 02-DEC-2023
DEFINITION  B-lymphocyte antigen CD19 [Dama dama].
ACCESSION   XP_061009072
VERSION     XP_061009072.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153089.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..566
                     /product="B-lymphocyte antigen CD19"
                     /calculated_mol_wt=61715
     Region          22..120
                     /region_name="CD19_protodomain_1_2"
                     /note="CD19 (Cluster of Differentiation 19), a unique
                     double immunoglobulin (Ig)-fold protodomain 1 and 2;
                     cd23999"
                     /db_xref="CDD:467826"
     Region          22..64
                     /region_name="protodomain 1"
                     /note="protodomain 1 [structural motif]"
                     /db_xref="CDD:467826"
     Region          22..27
                     /region_name="strand A'"
                     /note="strand A' [structural motif]"
                     /db_xref="CDD:467826"
     Region          29..36
                     /region_name="strand B"
                     /note="strand B [structural motif]"
                     /db_xref="CDD:467826"
     Site            order(31,33,35,86,88,90,116)
                     /site_type="other"
                     /note="CD81 binding site [polypeptide binding]"
                     /db_xref="CDD:467826"
     Region          37..46
                     /region_name="CDR1"
                     /note="CDR1 [structural motif]"
                     /db_xref="CDD:467826"
     Region          46..53
                     /region_name="strand C"
                     /note="strand C [structural motif]"
                     /db_xref="CDD:467826"
     Region          60..64
                     /region_name="strand C'"
                     /note="strand C' [structural motif]"
                     /db_xref="CDD:467826"
     Region          65..68
                     /region_name="CDR2"
                     /note="CDR2 [structural motif]"
                     /db_xref="CDD:467826"
     Region          68..120
                     /region_name="protodomain 2"
                     /note="protodomain 2 [structural motif]"
                     /db_xref="CDD:467826"
     Region          68..72
                     /region_name="strand D"
                     /note="strand D [structural motif]"
                     /db_xref="CDD:467826"
     Region          85..90
                     /region_name="strand E"
                     /note="strand E [structural motif]"
                     /db_xref="CDD:467826"
     Region          96..104
                     /region_name="strand F"
                     /note="strand F [structural motif]"
                     /db_xref="CDD:467826"
     Site            101
                     /site_type="other"
                     /note="antibody binding site [polypeptide binding]"
                     /db_xref="CDD:467826"
     Region          105..112
                     /region_name="CDR3"
                     /note="CDR3 [structural motif]"
                     /db_xref="CDD:467826"
     Region          115..120
                     /region_name="strand G"
                     /note="strand G [structural motif]"
                     /db_xref="CDD:467826"
     Region          192..285
                     /region_name="CD19_double_Ig"
                     /note="CD19 (Cluster of Differentiation 19), a unique
                     double immunoglobulin (Ig)-fold domain; cl49627"
                     /db_xref="CDD:483967"
     Region          192..237
                     /region_name="protodomain 1+3"
                     /note="protodomain 1+3 [structural motif]"
                     /db_xref="CDD:467824"
     Region          192..196
                     /region_name="strand A'"
                     /note="strand A' [structural motif]"
                     /db_xref="CDD:467824"
     Region          198..205
                     /region_name="strand B"
                     /note="strand B [structural motif]"
                     /db_xref="CDD:467824"
     Site            order(200,202,204,237,256,258,260,265,281)
                     /site_type="other"
                     /note="CD81 binding site [polypeptide binding]"
                     /db_xref="CDD:467824"
     Region          206..215
                     /region_name="CDR1"
                     /note="CDR1 [structural motif]"
                     /db_xref="CDD:467824"
     Region          215..222
                     /region_name="strand C"
                     /note="strand C [structural motif]"
                     /db_xref="CDD:467824"
     Site            order(222,271)
                     /site_type="other"
                     /note="antibody binding site [polypeptide binding]"
                     /db_xref="CDD:467824"
     Region          232..236
                     /region_name="strand C'"
                     /note="strand C' [structural motif]"
                     /db_xref="CDD:467824"
     Region          237..244
                     /region_name="CDR2"
                     /note="CDR2 [structural motif]"
                     /db_xref="CDD:467824"
     Region          244..285
                     /region_name="protodomain 2+4"
                     /note="protodomain 2+4 [structural motif]"
                     /db_xref="CDD:467824"
     Region          244..248
                     /region_name="strand D"
                     /note="strand D [structural motif]"
                     /db_xref="CDD:467824"
     Region          255..260
                     /region_name="strand E"
                     /note="strand E [structural motif]"
                     /db_xref="CDD:467824"
     Region          266..274
                     /region_name="strand F"
                     /note="strand F [structural motif]"
                     /db_xref="CDD:467824"
     Region          274..280
                     /region_name="CDR3"
                     /note="CDR3 [structural motif]"
                     /db_xref="CDD:467824"
     Region          280..285
                     /region_name="strand G"
                     /note="strand G [structural motif]"
                     /db_xref="CDD:467824"
     CDS             1..566
                     /gene="CD19"
                     /coded_by="XM_061153089.1:61..1761"
                     /db_xref="GeneID:133063569"
ORIGIN      
        1 mpppllfllf ltpmgvrped prlveakegg navlpclegs sdgppehlaw frgsqlkpfl
       61 elslglpglg ihvgplgtlk epqgtllflf nvskhmggfy lcqsglpseq gwqpgwtvsv
      121 kdsgklfrwn asdlsdlgcd sgnistgrkp ssghltksql hvwgwdhfke ishtetacap
      181 snstlnqsnn rdltvapgst lllscgasrt slvrgsvswi hkypmkpdvk llslnvseha
      241 qhremwvmgt lggkvvlllp eataqdadty rcnhgnkttq mqlkvtaqsv whwlletgvw
      301 kvpvatliyl ifcltslvgf lyfrralilr rkrkrmtdpt rrffkvtppp gngassqygn
      361 mlslsmphsg tgralrwaag lgaaapsygn prsdvqeara agsrsppgtg peeeegeaye
      421 epdseegsef yendsklgqd qlsqdgsgye npeegsldpq dedsfsngae syenedeela
      481 ptvtrttdfl sphgsawdps reatslgsqs yedmrgilya apqlrfvraq pganheedad
      541 syenmdnpdg pepawgggar igwstr
//
LOCUS       XP_061009073             993 aa            linear   MAM 02-DEC-2023
DEFINITION  sarcoplasmic/endoplasmic reticulum calcium ATPase 1 [Dama dama].
ACCESSION   XP_061009073
VERSION     XP_061009073.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153090.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..993
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..993
                     /product="sarcoplasmic/endoplasmic reticulum calcium
                     ATPase 1"
                     /calculated_mol_wt=109307
     Region          5..988
                     /region_name="P-type_ATPase_SERCA"
                     /note="sarco/endoplasmic reticulum Ca(2+)-ATPase (SERCA),
                     similar to mammalian ATP2A1-3/SERCA1-3; cd02083"
                     /db_xref="CDD:319778"
     Site            order(309,795,799)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:319778"
     Site            order(351..353,442,487,489,492,494,514..516,559,561,
                     624..626,677,683,702,705)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:319778"
     Site            order(767,770,798..799,907)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:319778"
     CDS             1..993
                     /gene="ATP2A1"
                     /coded_by="XM_061153090.1:174..3155"
                     /db_xref="GeneID:133063570"
ORIGIN      
        1 meaahsktte eclayfgvse ttgltpdqvk rhlekyghne lpteegkslw elvleqfedl
       61 lvrilllaac isfvlawfee geetvtafve pfvillilia naivgvwqer naenaiealk
      121 eyepemgkvy radrksvqri kardivpgdi vevavgdkvp adiriltiks ttlrvdqsil
      181 tgesvsvikh tepvpdprav nqdkknmlfs gtniaagkai givattgvgt eigkirdqma
      241 ateqdktplq qkldefgeql skvislicva vwlinighfn dpvhggswir gaiyyfkiav
      301 alavaaipeg lpavittcla lgtrrmakkn aivrslpsve tlgctsvics dktgtlttnq
      361 msvckmfiid rvdgdlclln efsitgstya pegevlkndk pvrsgqydgl velaticalc
      421 ndssldfnet kgvyekvgea tetalttlve kmnvfntevr nlskverana cnsvirqlmk
      481 keftlefsrd rksmsvycsp aksraavgnk mfvkgapegv idrcnyvrvg ttrvpmtgpv
      541 kekilsvike wgtgrdtlrc lalatrdtpp kreemvldds trfmeyetdl tfvgvvgmld
      601 pprkevmgsi qlcrdagirv imitgdnkgt aiaicrrigi fgenedvadr aytgrefddl
      661 plaeqreacr raccfarvep shkskiveyl qsydeitamt gdgvndapal kkaeigiamg
      721 sgtavaktas emvladdnfs tivaaveegr aiynnmkqfi rylissnvge vvcifltaal
      781 glpealipvq llwvnlvtdg lpatalgfnp pdldimdrpp rtpkeplisg wlffrymaig
      841 gyvgaatvga aawwflyaed gphvtynqlt hfmkcsehnp dfegvdcevf eapepmtmal
      901 svlvtiemcn alnslsenqs lvrmppwvni wlvgsiclsm slhflilyvd plpmifklqa
      961 ldlyhwlmvl kislpvigid eilkfvarny leg
//
LOCUS       XP_061009074             585 aa            linear   MAM 02-DEC-2023
DEFINITION  rab GTPase-binding effector protein 2 [Dama dama].
ACCESSION   XP_061009074
VERSION     XP_061009074.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153091.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..585
                     /product="rab GTPase-binding effector protein 2"
                     /calculated_mol_wt=65408
     Region          27..>180
                     /region_name="Rabaptin"
                     /note="pfam03528"
                     /db_xref="CDD:367545"
     Region          288..562
                     /region_name="Rab5-bind"
                     /note="Rabaptin-like protein; pfam09311"
                     /db_xref="CDD:462752"
     CDS             1..585
                     /gene="RABEP2"
                     /coded_by="XM_061153091.1:170..1927"
                     /db_xref="GeneID:133063571"
ORIGIN      
        1 maaaapaaag edgrrrlpra amdiqpqega kveaesgelv rlraelagal aemetmkava
       61 evsestkaea vaavqrqcqe evaslqailk dsissyeaqi tslkqerqqq qqdceekere
      121 lgrlkqllsr ahpldslekq mekahedsek lreivlpmeq eieelkakll raeeliqeiq
      181 rrprhppslh gstelllsrd psppleplee lsedggpaae afahncddsa sissfslgmg
      241 asgsaslprs rqglspeqee taslvstgtl vpegiylppp gyqlvpdnqw eqlqlegrql
      301 qkdlesvtre rdelqeglrr snedcakqmq vllaqvqnse qllrtlqgtv sqaqervqlq
      361 maelatshkc lshevkrlte enqglraeql pssaprgleq deggeeslps slpelqqlvh
      421 rtqqeararq qaqeheaerl rieivtlrea ldeetaaras legqlrvqre etevleaslc
      481 slriemervq eeqskakrqe vlrppqgsgr teeaqltdll seqrakmlrl qaeletseqv
      541 qrdfvrlsqa lqvrlerirq aesleqvrgi ideaplrdvr dikdt
//
LOCUS       XP_061009075             683 aa            linear   MAM 02-DEC-2023
DEFINITION  SH2B adapter protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061009075
VERSION     XP_061009075.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153092.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..683
                     /product="SH2B adapter protein 1 isoform X1"
                     /calculated_mol_wt=72066
     Region          26..81
                     /region_name="Phe_ZIP"
                     /note="Phenylalanine zipper; pfam08916"
                     /db_xref="CDD:462631"
     Region          247..377
                     /region_name="PH_SH2B_family"
                     /note="SH2B adapter protein 1, 2, and 3 Pleckstrin
                     homology (PH) domain; cd01231"
                     /db_xref="CDD:269938"
     Region          517..613
                     /region_name="SH2_SH2B_family"
                     /note="Src homology 2 (SH2) domain found in SH2B adapter
                     protein family; cd10346"
                     /db_xref="CDD:198209"
     Site            order(533,554,575,577)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198209"
     Site            order(576,603)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198209"
     CDS             1..683
                     /gene="SH2B1"
                     /coded_by="XM_061153092.1:236..2287"
                     /db_xref="GeneID:133063572"
ORIGIN      
        1 mndapspedg aspsppslpp ppppcwrefc esharaaald facrfrlyla shpqyagpga
       61 eaafsrrfae lflqhfeaev arasgflspp lraplspgve vpphdlsles craggplavl
      121 gpsrssedla gplpssvsss satsskpklk krfslrsvgr svrgsvrgil qwrgtvdpps
      181 pagpletasg ppalggnsns nssggagtvs rglvsdgtsp gdrwthrfer lrlsrgggal
      241 kdgtgvvqre ellsfmgaee aapdpagvgr gggaagptsg gggqpqwqkc rlllrsegeg
      301 ggswleffvp pkasrprlsi pcstitdvrt ttalempdre ntfvvkvegp leyiletada
      361 lhvkawvsdi qeclspgpyp atsprpmtlp lapgtsfltr entdsleppc lnhseslpsq
      421 glllgpsess nrlsqgaygg lsdrpsasis pssasiaash fdsmellppe lppripieeg
      481 ppagtvhpla apyppldtpe tatgsllfqg epeggegdqp lsgypwfhgm lsrlkaaqlv
      541 laggpgshgv flvrqsetrr geyvltfnfq gkakhlrlsl neegqcrvqh lwfqsifdml
      601 ehfrmhpipl esggssdvvl vsyvvssqrq qgeqsrsage evpvhprsee agsrpgtmqg
      661 careidatpm ppppscpser vtv
//
LOCUS       XP_061009076             683 aa            linear   MAM 02-DEC-2023
DEFINITION  SH2B adapter protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061009076
VERSION     XP_061009076.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153093.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..683
                     /product="SH2B adapter protein 1 isoform X1"
                     /calculated_mol_wt=72066
     Region          26..81
                     /region_name="Phe_ZIP"
                     /note="Phenylalanine zipper; pfam08916"
                     /db_xref="CDD:462631"
     Region          247..377
                     /region_name="PH_SH2B_family"
                     /note="SH2B adapter protein 1, 2, and 3 Pleckstrin
                     homology (PH) domain; cd01231"
                     /db_xref="CDD:269938"
     Region          517..613
                     /region_name="SH2_SH2B_family"
                     /note="Src homology 2 (SH2) domain found in SH2B adapter
                     protein family; cd10346"
                     /db_xref="CDD:198209"
     Site            order(533,554,575,577)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198209"
     Site            order(576,603)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198209"
     CDS             1..683
                     /gene="SH2B1"
                     /coded_by="XM_061153093.1:1630..3681"
                     /db_xref="GeneID:133063572"
ORIGIN      
        1 mndapspedg aspsppslpp ppppcwrefc esharaaald facrfrlyla shpqyagpga
       61 eaafsrrfae lflqhfeaev arasgflspp lraplspgve vpphdlsles craggplavl
      121 gpsrssedla gplpssvsss satsskpklk krfslrsvgr svrgsvrgil qwrgtvdpps
      181 pagpletasg ppalggnsns nssggagtvs rglvsdgtsp gdrwthrfer lrlsrgggal
      241 kdgtgvvqre ellsfmgaee aapdpagvgr gggaagptsg gggqpqwqkc rlllrsegeg
      301 ggswleffvp pkasrprlsi pcstitdvrt ttalempdre ntfvvkvegp leyiletada
      361 lhvkawvsdi qeclspgpyp atsprpmtlp lapgtsfltr entdsleppc lnhseslpsq
      421 glllgpsess nrlsqgaygg lsdrpsasis pssasiaash fdsmellppe lppripieeg
      481 ppagtvhpla apyppldtpe tatgsllfqg epeggegdqp lsgypwfhgm lsrlkaaqlv
      541 laggpgshgv flvrqsetrr geyvltfnfq gkakhlrlsl neegqcrvqh lwfqsifdml
      601 ehfrmhpipl esggssdvvl vsyvvssqrq qgeqsrsage evpvhprsee agsrpgtmqg
      661 careidatpm ppppscpser vtv
//
LOCUS       XP_061009077             683 aa            linear   MAM 02-DEC-2023
DEFINITION  SH2B adapter protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061009077
VERSION     XP_061009077.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153094.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..683
                     /product="SH2B adapter protein 1 isoform X1"
                     /calculated_mol_wt=72066
     Region          26..81
                     /region_name="Phe_ZIP"
                     /note="Phenylalanine zipper; pfam08916"
                     /db_xref="CDD:462631"
     Region          247..377
                     /region_name="PH_SH2B_family"
                     /note="SH2B adapter protein 1, 2, and 3 Pleckstrin
                     homology (PH) domain; cd01231"
                     /db_xref="CDD:269938"
     Region          517..613
                     /region_name="SH2_SH2B_family"
                     /note="Src homology 2 (SH2) domain found in SH2B adapter
                     protein family; cd10346"
                     /db_xref="CDD:198209"
     Site            order(533,554,575,577)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198209"
     Site            order(576,603)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198209"
     CDS             1..683
                     /gene="SH2B1"
                     /coded_by="XM_061153094.1:380..2431"
                     /db_xref="GeneID:133063572"
ORIGIN      
        1 mndapspedg aspsppslpp ppppcwrefc esharaaald facrfrlyla shpqyagpga
       61 eaafsrrfae lflqhfeaev arasgflspp lraplspgve vpphdlsles craggplavl
      121 gpsrssedla gplpssvsss satsskpklk krfslrsvgr svrgsvrgil qwrgtvdpps
      181 pagpletasg ppalggnsns nssggagtvs rglvsdgtsp gdrwthrfer lrlsrgggal
      241 kdgtgvvqre ellsfmgaee aapdpagvgr gggaagptsg gggqpqwqkc rlllrsegeg
      301 ggswleffvp pkasrprlsi pcstitdvrt ttalempdre ntfvvkvegp leyiletada
      361 lhvkawvsdi qeclspgpyp atsprpmtlp lapgtsfltr entdsleppc lnhseslpsq
      421 glllgpsess nrlsqgaygg lsdrpsasis pssasiaash fdsmellppe lppripieeg
      481 ppagtvhpla apyppldtpe tatgsllfqg epeggegdqp lsgypwfhgm lsrlkaaqlv
      541 laggpgshgv flvrqsetrr geyvltfnfq gkakhlrlsl neegqcrvqh lwfqsifdml
      601 ehfrmhpipl esggssdvvl vsyvvssqrq qgeqsrsage evpvhprsee agsrpgtmqg
      661 careidatpm ppppscpser vtv
//
LOCUS       XP_061009078             670 aa            linear   MAM 02-DEC-2023
DEFINITION  SH2B adapter protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061009078
VERSION     XP_061009078.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153095.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..670
                     /product="SH2B adapter protein 1 isoform X2"
                     /calculated_mol_wt=70699
     Region          26..81
                     /region_name="Phe_ZIP"
                     /note="Phenylalanine zipper; pfam08916"
                     /db_xref="CDD:462631"
     Region          247..377
                     /region_name="PH_SH2B_family"
                     /note="SH2B adapter protein 1, 2, and 3 Pleckstrin
                     homology (PH) domain; cd01231"
                     /db_xref="CDD:269938"
     Region          517..613
                     /region_name="SH2_SH2B_family"
                     /note="Src homology 2 (SH2) domain found in SH2B adapter
                     protein family; cd10346"
                     /db_xref="CDD:198209"
     Site            order(533,554,575,577)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198209"
     Site            order(576,603)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198209"
     CDS             1..670
                     /gene="SH2B1"
                     /coded_by="XM_061153095.1:236..2248"
                     /db_xref="GeneID:133063572"
ORIGIN      
        1 mndapspedg aspsppslpp ppppcwrefc esharaaald facrfrlyla shpqyagpga
       61 eaafsrrfae lflqhfeaev arasgflspp lraplspgve vpphdlsles craggplavl
      121 gpsrssedla gplpssvsss satsskpklk krfslrsvgr svrgsvrgil qwrgtvdpps
      181 pagpletasg ppalggnsns nssggagtvs rglvsdgtsp gdrwthrfer lrlsrgggal
      241 kdgtgvvqre ellsfmgaee aapdpagvgr gggaagptsg gggqpqwqkc rlllrsegeg
      301 ggswleffvp pkasrprlsi pcstitdvrt ttalempdre ntfvvkvegp leyiletada
      361 lhvkawvsdi qeclspgpyp atsprpmtlp lapgtsfltr entdsleppc lnhseslpsq
      421 glllgpsess nrlsqgaygg lsdrpsasis pssasiaash fdsmellppe lppripieeg
      481 ppagtvhpla apyppldtpe tatgsllfqg epeggegdqp lsgypwfhgm lsrlkaaqlv
      541 laggpgshgv flvrqsetrr geyvltfnfq gkakhlrlsl neegqcrvqh lwfqsifdml
      601 ehfrmhpipl esggssdvvl vsyvvssqrq qgreqagnha gvcegdrcyp dasstlmpfg
      661 asdcviehlp
//
LOCUS       XP_061009079             756 aa            linear   MAM 02-DEC-2023
DEFINITION  SH2B adapter protein 1 isoform X3 [Dama dama].
ACCESSION   XP_061009079
VERSION     XP_061009079.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153096.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..756
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..756
                     /product="SH2B adapter protein 1 isoform X3"
                     /calculated_mol_wt=79196
     Region          26..81
                     /region_name="Phe_ZIP"
                     /note="Phenylalanine zipper; pfam08916"
                     /db_xref="CDD:462631"
     Region          247..377
                     /region_name="PH_SH2B_family"
                     /note="SH2B adapter protein 1, 2, and 3 Pleckstrin
                     homology (PH) domain; cd01231"
                     /db_xref="CDD:269938"
     Region          517..613
                     /region_name="SH2_SH2B_family"
                     /note="Src homology 2 (SH2) domain found in SH2B adapter
                     protein family; cd10346"
                     /db_xref="CDD:198209"
     Site            order(533,554,575,577)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198209"
     Site            order(576,603)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198209"
     CDS             1..756
                     /gene="SH2B1"
                     /coded_by="XM_061153096.1:232..2502"
                     /db_xref="GeneID:133063572"
ORIGIN      
        1 mndapspedg aspsppslpp ppppcwrefc esharaaald facrfrlyla shpqyagpga
       61 eaafsrrfae lflqhfeaev arasgflspp lraplspgve vpphdlsles craggplavl
      121 gpsrssedla gplpssvsss satsskpklk krfslrsvgr svrgsvrgil qwrgtvdpps
      181 pagpletasg ppalggnsns nssggagtvs rglvsdgtsp gdrwthrfer lrlsrgggal
      241 kdgtgvvqre ellsfmgaee aapdpagvgr gggaagptsg gggqpqwqkc rlllrsegeg
      301 ggswleffvp pkasrprlsi pcstitdvrt ttalempdre ntfvvkvegp leyiletada
      361 lhvkawvsdi qeclspgpyp atsprpmtlp lapgtsfltr entdsleppc lnhseslpsq
      421 glllgpsess nrlsqgaygg lsdrpsasis pssasiaash fdsmellppe lppripieeg
      481 ppagtvhpla apyppldtpe tatgsllfqg epeggegdqp lsgypwfhgm lsrlkaaqlv
      541 laggpgshgv flvrqsetrr geyvltfnfq gkakhlrlsl neegqcrvqh lwfqsifdml
      601 ehfrmhpipl esggssdvvl vsyvvssqrq qesstshdpp qppeppswtd pphpgaeeas
      661 gapevaaaaa aaakerqeke kagsggiqee lvpvvelvpv veleeavapg teaqgvagsa
      721 gapgatlmvq lqqlplggdg eegghprain nqysfv
//
LOCUS       XP_061009080            1078 aa            linear   MAM 02-DEC-2023
DEFINITION  ataxin-2-like protein isoform X1 [Dama dama].
ACCESSION   XP_061009080
VERSION     XP_061009080.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153097.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1078
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1078
                     /product="ataxin-2-like protein isoform X1"
                     /calculated_mol_wt=113147
     Region          124..197
                     /region_name="SM-ATX"
                     /note="Ataxin 2 SM domain; pfam14438"
                     /db_xref="CDD:464173"
     Region          265..327
                     /region_name="LsmAD"
                     /note="LsmAD domain; pfam06741"
                     /db_xref="CDD:461998"
     Region          <437..944
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          753..>972
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     CDS             1..1078
                     /gene="ATXN2L"
                     /coded_by="XM_061153097.1:539..3775"
                     /db_xref="GeneID:133063574"
ORIGIN      
        1 mlkpqppqqt sqpqqppptq qavarrppgg tsppngglpg plastsappg ppaaaspclg
       61 paaaagsglr rgaegilapq ppppqqqhqe rqgaaaigsa rgqstgkgpp qspvfegvyn
      121 nsrmlhflta vvgstcdvkv kngttyegif ktlsskfela vdavhrkvse paggprredi
      181 vdtmvfkpsd vmlvhfrnvd fnyatkdkft dsaiamnskv ngehkekvlq rweggdsnsd
      241 dydlesdmsn gwdpnemfkf neenygvktt ydsslssytv plekdnseef rqrelraaql
      301 areiesspqy rlriamendd grteeekhsa vqrqgsgres pslaaregky iplpqrvreg
      361 prggvrcsss rggrpglssl pprgphhldn sspgpgsear ginggpsrms pkaqrplrga
      421 kslsspssrp sgeasvpppp avgrmypprs pksaapapis ascpeppigs avltssasip
      481 vtsavgdpgv gsvspaspki slaptdvkel pakepgrtle sqelsriagk vpglqneqkr
      541 sqleelrkfg aqfklqpsss petsldpfpp rilkeeakgk ekevdgllas eplgspvssk
      601 aesvsdkedk pplppaggae gpeqppppcp sqtgsppvgl ikgddkdegp vaeqvkkstl
      661 npnakefnpt kpllsvnkst stptspgprt hstpsipvlt agqsglyspq yisyipqihm
      721 gpavqapqmy pypvsnsvpg qqgkyrgakg slppqrsdqh qpasappmmq aaaaaagppl
      781 vaatpyssyi pynpqqfpgq pammqpmahy psqpvfapml qsnprmltsg shpqaivsss
      841 tpqypsaeqp tpqalyatvh qsyphhatql hahqpqpatt ptgsqppsqh aapspvqhqa
      901 gqaphlgsgq pqqnlyhpga ltgtppslpp gpsaqspqss fpqpaavyai hahqqlphgf
      961 tnmahvtqah vqtgitaapp phpgaphppq vmllhppqsh ggppqgavpq sgvpalsast
     1021 pspypyighp qgeqpgqapg fpggaddrir efslaggiwh gradglqvgq darvlgge
//
LOCUS       XP_061009082            1065 aa            linear   MAM 02-DEC-2023
DEFINITION  ataxin-2-like protein isoform X2 [Dama dama].
ACCESSION   XP_061009082
VERSION     XP_061009082.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153099.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1065
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1065
                     /product="ataxin-2-like protein isoform X2"
                     /calculated_mol_wt=111878
     Region          124..197
                     /region_name="SM-ATX"
                     /note="Ataxin 2 SM domain; pfam14438"
                     /db_xref="CDD:464173"
     Region          265..327
                     /region_name="LsmAD"
                     /note="LsmAD domain; pfam06741"
                     /db_xref="CDD:461998"
     Region          <437..944
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          753..>972
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     CDS             1..1065
                     /gene="ATXN2L"
                     /coded_by="XM_061153099.1:539..3736"
                     /db_xref="GeneID:133063574"
ORIGIN      
        1 mlkpqppqqt sqpqqppptq qavarrppgg tsppngglpg plastsappg ppaaaspclg
       61 paaaagsglr rgaegilapq ppppqqqhqe rqgaaaigsa rgqstgkgpp qspvfegvyn
      121 nsrmlhflta vvgstcdvkv kngttyegif ktlsskfela vdavhrkvse paggprredi
      181 vdtmvfkpsd vmlvhfrnvd fnyatkdkft dsaiamnskv ngehkekvlq rweggdsnsd
      241 dydlesdmsn gwdpnemfkf neenygvktt ydsslssytv plekdnseef rqrelraaql
      301 areiesspqy rlriamendd grteeekhsa vqrqgsgres pslaaregky iplpqrvreg
      361 prggvrcsss rggrpglssl pprgphhldn sspgpgsear ginggpsrms pkaqrplrga
      421 kslsspssrp sgeasvpppp avgrmypprs pksaapapis ascpeppigs avltssasip
      481 vtsavgdpgv gsvspaspki slaptdvkel pakepgrtle sqelsriagk vpglqneqkr
      541 sqleelrkfg aqfklqpsss petsldpfpp rilkeeakgk ekevdgllas eplgspvssk
      601 aesvsdkedk pplppaggae gpeqppppcp sqtgsppvgl ikgddkdegp vaeqvkkstl
      661 npnakefnpt kpllsvnkst stptspgprt hstpsipvlt agqsglyspq yisyipqihm
      721 gpavqapqmy pypvsnsvpg qqgkyrgakg slppqrsdqh qpasappmmq aaaaaagppl
      781 vaatpyssyi pynpqqfpgq pammqpmahy psqpvfapml qsnprmltsg shpqaivsss
      841 tpqypsaeqp tpqalyatvh qsyphhatql hahqpqpatt ptgsqppsqh aapspvqhqa
      901 gqaphlgsgq pqqnlyhpga ltgtppslpp gpsaqspqss fpqpaavyai hahqqlphgf
      961 tnmahvtqah vqtgitaapp phpgaphppq vmllhppqsh ggppqgavpq sgvpalsast
     1021 pspypyighp qgeqpgqapg fpggaddril qshpsqqlpf hppgn
//
LOCUS       XP_061009083            1065 aa            linear   MAM 02-DEC-2023
DEFINITION  ataxin-2-like protein isoform X3 [Dama dama].
ACCESSION   XP_061009083
VERSION     XP_061009083.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153100.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1065
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1065
                     /product="ataxin-2-like protein isoform X3"
                     /calculated_mol_wt=111707
     Region          124..197
                     /region_name="SM-ATX"
                     /note="Ataxin 2 SM domain; pfam14438"
                     /db_xref="CDD:464173"
     Region          265..327
                     /region_name="LsmAD"
                     /note="LsmAD domain; pfam06741"
                     /db_xref="CDD:461998"
     Region          <437..944
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          753..>972
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     CDS             1..1065
                     /gene="ATXN2L"
                     /coded_by="XM_061153100.1:539..3736"
                     /db_xref="GeneID:133063574"
ORIGIN      
        1 mlkpqppqqt sqpqqppptq qavarrppgg tsppngglpg plastsappg ppaaaspclg
       61 paaaagsglr rgaegilapq ppppqqqhqe rqgaaaigsa rgqstgkgpp qspvfegvyn
      121 nsrmlhflta vvgstcdvkv kngttyegif ktlsskfela vdavhrkvse paggprredi
      181 vdtmvfkpsd vmlvhfrnvd fnyatkdkft dsaiamnskv ngehkekvlq rweggdsnsd
      241 dydlesdmsn gwdpnemfkf neenygvktt ydsslssytv plekdnseef rqrelraaql
      301 areiesspqy rlriamendd grteeekhsa vqrqgsgres pslaaregky iplpqrvreg
      361 prggvrcsss rggrpglssl pprgphhldn sspgpgsear ginggpsrms pkaqrplrga
      421 kslsspssrp sgeasvpppp avgrmypprs pksaapapis ascpeppigs avltssasip
      481 vtsavgdpgv gsvspaspki slaptdvkel pakepgrtle sqelsriagk vpglqneqkr
      541 sqleelrkfg aqfklqpsss petsldpfpp rilkeeakgk ekevdgllas eplgspvssk
      601 aesvsdkedk pplppaggae gpeqppppcp sqtgsppvgl ikgddkdegp vaeqvkkstl
      661 npnakefnpt kpllsvnkst stptspgprt hstpsipvlt agqsglyspq yisyipqihm
      721 gpavqapqmy pypvsnsvpg qqgkyrgakg slppqrsdqh qpasappmmq aaaaaagppl
      781 vaatpyssyi pynpqqfpgq pammqpmahy psqpvfapml qsnprmltsg shpqaivsss
      841 tpqypsaeqp tpqalyatvh qsyphhatql hahqpqpatt ptgsqppsqh aapspvqhqa
      901 gqaphlgsgq pqqnlyhpga ltgtppslpp gpsaqspqss fpqpaavyai hahqqlphgf
      961 tnmahvtqah vqtgitaapp phpgaphppq vmllhppqsh ggppqgavpq sgvpalsast
     1021 pspypyighp qgeqpgqapg fpggaddrip plpppgelki vlaat
//
LOCUS       XP_061009084            1059 aa            linear   MAM 02-DEC-2023
DEFINITION  ataxin-2-like protein isoform X4 [Dama dama].
ACCESSION   XP_061009084
VERSION     XP_061009084.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153101.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1059
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1059
                     /product="ataxin-2-like protein isoform X4"
                     /calculated_mol_wt=111168
     Region          124..197
                     /region_name="SM-ATX"
                     /note="Ataxin 2 SM domain; pfam14438"
                     /db_xref="CDD:464173"
     Region          265..327
                     /region_name="LsmAD"
                     /note="LsmAD domain; pfam06741"
                     /db_xref="CDD:461998"
     Region          <437..944
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          753..>972
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     CDS             1..1059
                     /gene="ATXN2L"
                     /coded_by="XM_061153101.1:539..3718"
                     /db_xref="GeneID:133063574"
ORIGIN      
        1 mlkpqppqqt sqpqqppptq qavarrppgg tsppngglpg plastsappg ppaaaspclg
       61 paaaagsglr rgaegilapq ppppqqqhqe rqgaaaigsa rgqstgkgpp qspvfegvyn
      121 nsrmlhflta vvgstcdvkv kngttyegif ktlsskfela vdavhrkvse paggprredi
      181 vdtmvfkpsd vmlvhfrnvd fnyatkdkft dsaiamnskv ngehkekvlq rweggdsnsd
      241 dydlesdmsn gwdpnemfkf neenygvktt ydsslssytv plekdnseef rqrelraaql
      301 areiesspqy rlriamendd grteeekhsa vqrqgsgres pslaaregky iplpqrvreg
      361 prggvrcsss rggrpglssl pprgphhldn sspgpgsear ginggpsrms pkaqrplrga
      421 kslsspssrp sgeasvpppp avgrmypprs pksaapapis ascpeppigs avltssasip
      481 vtsavgdpgv gsvspaspki slaptdvkel pakepgrtle sqelsriagk vpglqneqkr
      541 sqleelrkfg aqfklqpsss petsldpfpp rilkeeakgk ekevdgllas eplgspvssk
      601 aesvsdkedk pplppaggae gpeqppppcp sqtgsppvgl ikgddkdegp vaeqvkkstl
      661 npnakefnpt kpllsvnkst stptspgprt hstpsipvlt agqsglyspq yisyipqihm
      721 gpavqapqmy pypvsnsvpg qqgkyrgakg slppqrsdqh qpasappmmq aaaaaagppl
      781 vaatpyssyi pynpqqfpgq pammqpmahy psqpvfapml qsnprmltsg shpqaivsss
      841 tpqypsaeqp tpqalyatvh qsyphhatql hahqpqpatt ptgsqppsqh aapspvqhqa
      901 gqaphlgsgq pqqnlyhpga ltgtppslpp gpsaqspqss fpqpaavyai hahqqlphgf
      961 tnmahvtqah vqtgitaapp phpgaphppq vmllhppqsh ggppqgavpq sgvpalsast
     1021 pspypyighp qgeqpgqapg fpggaddrip lsdpdcllt
//
LOCUS       XP_061009085            1059 aa            linear   MAM 02-DEC-2023
DEFINITION  ataxin-2-like protein isoform X4 [Dama dama].
ACCESSION   XP_061009085
VERSION     XP_061009085.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153102.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1059
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1059
                     /product="ataxin-2-like protein isoform X4"
                     /calculated_mol_wt=111168
     Region          124..197
                     /region_name="SM-ATX"
                     /note="Ataxin 2 SM domain; pfam14438"
                     /db_xref="CDD:464173"
     Region          265..327
                     /region_name="LsmAD"
                     /note="LsmAD domain; pfam06741"
                     /db_xref="CDD:461998"
     Region          <437..944
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          753..>972
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     CDS             1..1059
                     /gene="ATXN2L"
                     /coded_by="XM_061153102.1:539..3718"
                     /db_xref="GeneID:133063574"
ORIGIN      
        1 mlkpqppqqt sqpqqppptq qavarrppgg tsppngglpg plastsappg ppaaaspclg
       61 paaaagsglr rgaegilapq ppppqqqhqe rqgaaaigsa rgqstgkgpp qspvfegvyn
      121 nsrmlhflta vvgstcdvkv kngttyegif ktlsskfela vdavhrkvse paggprredi
      181 vdtmvfkpsd vmlvhfrnvd fnyatkdkft dsaiamnskv ngehkekvlq rweggdsnsd
      241 dydlesdmsn gwdpnemfkf neenygvktt ydsslssytv plekdnseef rqrelraaql
      301 areiesspqy rlriamendd grteeekhsa vqrqgsgres pslaaregky iplpqrvreg
      361 prggvrcsss rggrpglssl pprgphhldn sspgpgsear ginggpsrms pkaqrplrga
      421 kslsspssrp sgeasvpppp avgrmypprs pksaapapis ascpeppigs avltssasip
      481 vtsavgdpgv gsvspaspki slaptdvkel pakepgrtle sqelsriagk vpglqneqkr
      541 sqleelrkfg aqfklqpsss petsldpfpp rilkeeakgk ekevdgllas eplgspvssk
      601 aesvsdkedk pplppaggae gpeqppppcp sqtgsppvgl ikgddkdegp vaeqvkkstl
      661 npnakefnpt kpllsvnkst stptspgprt hstpsipvlt agqsglyspq yisyipqihm
      721 gpavqapqmy pypvsnsvpg qqgkyrgakg slppqrsdqh qpasappmmq aaaaaagppl
      781 vaatpyssyi pynpqqfpgq pammqpmahy psqpvfapml qsnprmltsg shpqaivsss
      841 tpqypsaeqp tpqalyatvh qsyphhatql hahqpqpatt ptgsqppsqh aapspvqhqa
      901 gqaphlgsgq pqqnlyhpga ltgtppslpp gpsaqspqss fpqpaavyai hahqqlphgf
      961 tnmahvtqah vqtgitaapp phpgaphppq vmllhppqsh ggppqgavpq sgvpalsast
     1021 pspypyighp qgeqpgqapg fpggaddrip lsdpdcllt
//
LOCUS       XP_061009086            1059 aa            linear   MAM 02-DEC-2023
DEFINITION  ataxin-2-like protein isoform X4 [Dama dama].
ACCESSION   XP_061009086
VERSION     XP_061009086.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153103.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1059
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1059
                     /product="ataxin-2-like protein isoform X4"
                     /calculated_mol_wt=111168
     Region          124..197
                     /region_name="SM-ATX"
                     /note="Ataxin 2 SM domain; pfam14438"
                     /db_xref="CDD:464173"
     Region          265..327
                     /region_name="LsmAD"
                     /note="LsmAD domain; pfam06741"
                     /db_xref="CDD:461998"
     Region          <437..944
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          753..>972
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     CDS             1..1059
                     /gene="ATXN2L"
                     /coded_by="XM_061153103.1:539..3718"
                     /db_xref="GeneID:133063574"
ORIGIN      
        1 mlkpqppqqt sqpqqppptq qavarrppgg tsppngglpg plastsappg ppaaaspclg
       61 paaaagsglr rgaegilapq ppppqqqhqe rqgaaaigsa rgqstgkgpp qspvfegvyn
      121 nsrmlhflta vvgstcdvkv kngttyegif ktlsskfela vdavhrkvse paggprredi
      181 vdtmvfkpsd vmlvhfrnvd fnyatkdkft dsaiamnskv ngehkekvlq rweggdsnsd
      241 dydlesdmsn gwdpnemfkf neenygvktt ydsslssytv plekdnseef rqrelraaql
      301 areiesspqy rlriamendd grteeekhsa vqrqgsgres pslaaregky iplpqrvreg
      361 prggvrcsss rggrpglssl pprgphhldn sspgpgsear ginggpsrms pkaqrplrga
      421 kslsspssrp sgeasvpppp avgrmypprs pksaapapis ascpeppigs avltssasip
      481 vtsavgdpgv gsvspaspki slaptdvkel pakepgrtle sqelsriagk vpglqneqkr
      541 sqleelrkfg aqfklqpsss petsldpfpp rilkeeakgk ekevdgllas eplgspvssk
      601 aesvsdkedk pplppaggae gpeqppppcp sqtgsppvgl ikgddkdegp vaeqvkkstl
      661 npnakefnpt kpllsvnkst stptspgprt hstpsipvlt agqsglyspq yisyipqihm
      721 gpavqapqmy pypvsnsvpg qqgkyrgakg slppqrsdqh qpasappmmq aaaaaagppl
      781 vaatpyssyi pynpqqfpgq pammqpmahy psqpvfapml qsnprmltsg shpqaivsss
      841 tpqypsaeqp tpqalyatvh qsyphhatql hahqpqpatt ptgsqppsqh aapspvqhqa
      901 gqaphlgsgq pqqnlyhpga ltgtppslpp gpsaqspqss fpqpaavyai hahqqlphgf
      961 tnmahvtqah vqtgitaapp phpgaphppq vmllhppqsh ggppqgavpq sgvpalsast
     1021 pspypyighp qgeqpgqapg fpggaddrip lsdpdcllt
//
LOCUS       XP_061009087            1047 aa            linear   MAM 02-DEC-2023
DEFINITION  ataxin-2-like protein isoform X5 [Dama dama].
ACCESSION   XP_061009087
VERSION     XP_061009087.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153104.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1047
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1047
                     /product="ataxin-2-like protein isoform X5"
                     /calculated_mol_wt=110113
     Region          124..197
                     /region_name="SM-ATX"
                     /note="Ataxin 2 SM domain; pfam14438"
                     /db_xref="CDD:464173"
     Region          265..327
                     /region_name="LsmAD"
                     /note="LsmAD domain; pfam06741"
                     /db_xref="CDD:461998"
     Region          <437..944
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          753..>972
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     CDS             1..1047
                     /gene="ATXN2L"
                     /coded_by="XM_061153104.1:539..3682"
                     /db_xref="GeneID:133063574"
ORIGIN      
        1 mlkpqppqqt sqpqqppptq qavarrppgg tsppngglpg plastsappg ppaaaspclg
       61 paaaagsglr rgaegilapq ppppqqqhqe rqgaaaigsa rgqstgkgpp qspvfegvyn
      121 nsrmlhflta vvgstcdvkv kngttyegif ktlsskfela vdavhrkvse paggprredi
      181 vdtmvfkpsd vmlvhfrnvd fnyatkdkft dsaiamnskv ngehkekvlq rweggdsnsd
      241 dydlesdmsn gwdpnemfkf neenygvktt ydsslssytv plekdnseef rqrelraaql
      301 areiesspqy rlriamendd grteeekhsa vqrqgsgres pslaaregky iplpqrvreg
      361 prggvrcsss rggrpglssl pprgphhldn sspgpgsear ginggpsrms pkaqrplrga
      421 kslsspssrp sgeasvpppp avgrmypprs pksaapapis ascpeppigs avltssasip
      481 vtsavgdpgv gsvspaspki slaptdvkel pakepgrtle sqelsriagk vpglqneqkr
      541 sqleelrkfg aqfklqpsss petsldpfpp rilkeeakgk ekevdgllas eplgspvssk
      601 aesvsdkedk pplppaggae gpeqppppcp sqtgsppvgl ikgddkdegp vaeqvkkstl
      661 npnakefnpt kpllsvnkst stptspgprt hstpsipvlt agqsglyspq yisyipqihm
      721 gpavqapqmy pypvsnsvpg qqgkyrgakg slppqrsdqh qpasappmmq aaaaaagppl
      781 vaatpyssyi pynpqqfpgq pammqpmahy psqpvfapml qsnprmltsg shpqaivsss
      841 tpqypsaeqp tpqalyatvh qsyphhatql hahqpqpatt ptgsqppsqh aapspvqhqa
      901 gqaphlgsgq pqqnlyhpga ltgtppslpp gpsaqspqss fpqpaavyai hahqqlphgf
      961 tnmahvtqah vqtgitaapp phpgaphppq vmllhppqsh ggppqgavpq sgvpalsast
     1021 pspypyighp qvqshpsqql pfhppgn
//
LOCUS       XP_061009088            1047 aa            linear   MAM 02-DEC-2023
DEFINITION  ataxin-2-like protein isoform X6 [Dama dama].
ACCESSION   XP_061009088
VERSION     XP_061009088.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153105.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1047
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1047
                     /product="ataxin-2-like protein isoform X6"
                     /calculated_mol_wt=109930
     Region          124..197
                     /region_name="SM-ATX"
                     /note="Ataxin 2 SM domain; pfam14438"
                     /db_xref="CDD:464173"
     Region          265..327
                     /region_name="LsmAD"
                     /note="LsmAD domain; pfam06741"
                     /db_xref="CDD:461998"
     Region          <437..944
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          753..>972
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     CDS             1..1047
                     /gene="ATXN2L"
                     /coded_by="XM_061153105.1:539..3682"
                     /db_xref="GeneID:133063574"
ORIGIN      
        1 mlkpqppqqt sqpqqppptq qavarrppgg tsppngglpg plastsappg ppaaaspclg
       61 paaaagsglr rgaegilapq ppppqqqhqe rqgaaaigsa rgqstgkgpp qspvfegvyn
      121 nsrmlhflta vvgstcdvkv kngttyegif ktlsskfela vdavhrkvse paggprredi
      181 vdtmvfkpsd vmlvhfrnvd fnyatkdkft dsaiamnskv ngehkekvlq rweggdsnsd
      241 dydlesdmsn gwdpnemfkf neenygvktt ydsslssytv plekdnseef rqrelraaql
      301 areiesspqy rlriamendd grteeekhsa vqrqgsgres pslaaregky iplpqrvreg
      361 prggvrcsss rggrpglssl pprgphhldn sspgpgsear ginggpsrms pkaqrplrga
      421 kslsspssrp sgeasvpppp avgrmypprs pksaapapis ascpeppigs avltssasip
      481 vtsavgdpgv gsvspaspki slaptdvkel pakepgrtle sqelsriagk vpglqneqkr
      541 sqleelrkfg aqfklqpsss petsldpfpp rilkeeakgk ekevdgllas eplgspvssk
      601 aesvsdkedk pplppaggae gpeqppppcp sqtgsppvgl ikgddkdegp vaeqvkkstl
      661 npnakefnpt kpllsvnkst stptspgprt hstpsipvlt agqsglyspq yisyipqihm
      721 gpavqapqmy pypvsnsvpg qqgkyrgakg slppqrsdqh qpasappmmq aaaaaagppl
      781 vaatpyssyi pynpqqfpgq pammqpmahy psqpvfapml qsnprmltsg shpqaivsss
      841 tpqypsaeqp tpqalyatvh qsyphhatql hahqpqpatt ptgsqppsqh aapspvqhqa
      901 gqaphlgsgq pqqnlyhpga ltgtppslpp gpsaqspqss fpqpaavyai hahqqlphgf
      961 tnmahvtqah vqtgitaapp phpgaphppq vmllhppqsh ggppqgavpq sgvpalsast
     1021 pspypyighp qaplpppgel kivlaat
//
LOCUS       XP_061009089            1041 aa            linear   MAM 02-DEC-2023
DEFINITION  ataxin-2-like protein isoform X7 [Dama dama].
ACCESSION   XP_061009089
VERSION     XP_061009089.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153106.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1041
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1041
                     /product="ataxin-2-like protein isoform X7"
                     /calculated_mol_wt=109391
     Region          124..197
                     /region_name="SM-ATX"
                     /note="Ataxin 2 SM domain; pfam14438"
                     /db_xref="CDD:464173"
     Region          265..327
                     /region_name="LsmAD"
                     /note="LsmAD domain; pfam06741"
                     /db_xref="CDD:461998"
     Region          <437..944
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          753..>972
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     CDS             1..1041
                     /gene="ATXN2L"
                     /coded_by="XM_061153106.1:539..3664"
                     /db_xref="GeneID:133063574"
ORIGIN      
        1 mlkpqppqqt sqpqqppptq qavarrppgg tsppngglpg plastsappg ppaaaspclg
       61 paaaagsglr rgaegilapq ppppqqqhqe rqgaaaigsa rgqstgkgpp qspvfegvyn
      121 nsrmlhflta vvgstcdvkv kngttyegif ktlsskfela vdavhrkvse paggprredi
      181 vdtmvfkpsd vmlvhfrnvd fnyatkdkft dsaiamnskv ngehkekvlq rweggdsnsd
      241 dydlesdmsn gwdpnemfkf neenygvktt ydsslssytv plekdnseef rqrelraaql
      301 areiesspqy rlriamendd grteeekhsa vqrqgsgres pslaaregky iplpqrvreg
      361 prggvrcsss rggrpglssl pprgphhldn sspgpgsear ginggpsrms pkaqrplrga
      421 kslsspssrp sgeasvpppp avgrmypprs pksaapapis ascpeppigs avltssasip
      481 vtsavgdpgv gsvspaspki slaptdvkel pakepgrtle sqelsriagk vpglqneqkr
      541 sqleelrkfg aqfklqpsss petsldpfpp rilkeeakgk ekevdgllas eplgspvssk
      601 aesvsdkedk pplppaggae gpeqppppcp sqtgsppvgl ikgddkdegp vaeqvkkstl
      661 npnakefnpt kpllsvnkst stptspgprt hstpsipvlt agqsglyspq yisyipqihm
      721 gpavqapqmy pypvsnsvpg qqgkyrgakg slppqrsdqh qpasappmmq aaaaaagppl
      781 vaatpyssyi pynpqqfpgq pammqpmahy psqpvfapml qsnprmltsg shpqaivsss
      841 tpqypsaeqp tpqalyatvh qsyphhatql hahqpqpatt ptgsqppsqh aapspvqhqa
      901 gqaphlgsgq pqqnlyhpga ltgtppslpp gpsaqspqss fpqpaavyai hahqqlphgf
      961 tnmahvtqah vqtgitaapp phpgaphppq vmllhppqsh ggppqgavpq sgvpalsast
     1021 pspypyighp qalsdpdcll t
//
LOCUS       XP_061009090            1041 aa            linear   MAM 02-DEC-2023
DEFINITION  ataxin-2-like protein isoform X7 [Dama dama].
ACCESSION   XP_061009090
VERSION     XP_061009090.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153107.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1041
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1041
                     /product="ataxin-2-like protein isoform X7"
                     /calculated_mol_wt=109391
     Region          124..197
                     /region_name="SM-ATX"
                     /note="Ataxin 2 SM domain; pfam14438"
                     /db_xref="CDD:464173"
     Region          265..327
                     /region_name="LsmAD"
                     /note="LsmAD domain; pfam06741"
                     /db_xref="CDD:461998"
     Region          <437..944
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          753..>972
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     CDS             1..1041
                     /gene="ATXN2L"
                     /coded_by="XM_061153107.1:539..3664"
                     /db_xref="GeneID:133063574"
ORIGIN      
        1 mlkpqppqqt sqpqqppptq qavarrppgg tsppngglpg plastsappg ppaaaspclg
       61 paaaagsglr rgaegilapq ppppqqqhqe rqgaaaigsa rgqstgkgpp qspvfegvyn
      121 nsrmlhflta vvgstcdvkv kngttyegif ktlsskfela vdavhrkvse paggprredi
      181 vdtmvfkpsd vmlvhfrnvd fnyatkdkft dsaiamnskv ngehkekvlq rweggdsnsd
      241 dydlesdmsn gwdpnemfkf neenygvktt ydsslssytv plekdnseef rqrelraaql
      301 areiesspqy rlriamendd grteeekhsa vqrqgsgres pslaaregky iplpqrvreg
      361 prggvrcsss rggrpglssl pprgphhldn sspgpgsear ginggpsrms pkaqrplrga
      421 kslsspssrp sgeasvpppp avgrmypprs pksaapapis ascpeppigs avltssasip
      481 vtsavgdpgv gsvspaspki slaptdvkel pakepgrtle sqelsriagk vpglqneqkr
      541 sqleelrkfg aqfklqpsss petsldpfpp rilkeeakgk ekevdgllas eplgspvssk
      601 aesvsdkedk pplppaggae gpeqppppcp sqtgsppvgl ikgddkdegp vaeqvkkstl
      661 npnakefnpt kpllsvnkst stptspgprt hstpsipvlt agqsglyspq yisyipqihm
      721 gpavqapqmy pypvsnsvpg qqgkyrgakg slppqrsdqh qpasappmmq aaaaaagppl
      781 vaatpyssyi pynpqqfpgq pammqpmahy psqpvfapml qsnprmltsg shpqaivsss
      841 tpqypsaeqp tpqalyatvh qsyphhatql hahqpqpatt ptgsqppsqh aapspvqhqa
      901 gqaphlgsgq pqqnlyhpga ltgtppslpp gpsaqspqss fpqpaavyai hahqqlphgf
      961 tnmahvtqah vqtgitaapp phpgaphppq vmllhppqsh ggppqgavpq sgvpalsast
     1021 pspypyighp qalsdpdcll t
//
LOCUS       XP_061009091            1041 aa            linear   MAM 02-DEC-2023
DEFINITION  ataxin-2-like protein isoform X7 [Dama dama].
ACCESSION   XP_061009091
VERSION     XP_061009091.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153108.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1041
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1041
                     /product="ataxin-2-like protein isoform X7"
                     /calculated_mol_wt=109391
     Region          124..197
                     /region_name="SM-ATX"
                     /note="Ataxin 2 SM domain; pfam14438"
                     /db_xref="CDD:464173"
     Region          265..327
                     /region_name="LsmAD"
                     /note="LsmAD domain; pfam06741"
                     /db_xref="CDD:461998"
     Region          <437..944
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          753..>972
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     CDS             1..1041
                     /gene="ATXN2L"
                     /coded_by="XM_061153108.1:539..3664"
                     /db_xref="GeneID:133063574"
ORIGIN      
        1 mlkpqppqqt sqpqqppptq qavarrppgg tsppngglpg plastsappg ppaaaspclg
       61 paaaagsglr rgaegilapq ppppqqqhqe rqgaaaigsa rgqstgkgpp qspvfegvyn
      121 nsrmlhflta vvgstcdvkv kngttyegif ktlsskfela vdavhrkvse paggprredi
      181 vdtmvfkpsd vmlvhfrnvd fnyatkdkft dsaiamnskv ngehkekvlq rweggdsnsd
      241 dydlesdmsn gwdpnemfkf neenygvktt ydsslssytv plekdnseef rqrelraaql
      301 areiesspqy rlriamendd grteeekhsa vqrqgsgres pslaaregky iplpqrvreg
      361 prggvrcsss rggrpglssl pprgphhldn sspgpgsear ginggpsrms pkaqrplrga
      421 kslsspssrp sgeasvpppp avgrmypprs pksaapapis ascpeppigs avltssasip
      481 vtsavgdpgv gsvspaspki slaptdvkel pakepgrtle sqelsriagk vpglqneqkr
      541 sqleelrkfg aqfklqpsss petsldpfpp rilkeeakgk ekevdgllas eplgspvssk
      601 aesvsdkedk pplppaggae gpeqppppcp sqtgsppvgl ikgddkdegp vaeqvkkstl
      661 npnakefnpt kpllsvnkst stptspgprt hstpsipvlt agqsglyspq yisyipqihm
      721 gpavqapqmy pypvsnsvpg qqgkyrgakg slppqrsdqh qpasappmmq aaaaaagppl
      781 vaatpyssyi pynpqqfpgq pammqpmahy psqpvfapml qsnprmltsg shpqaivsss
      841 tpqypsaeqp tpqalyatvh qsyphhatql hahqpqpatt ptgsqppsqh aapspvqhqa
      901 gqaphlgsgq pqqnlyhpga ltgtppslpp gpsaqspqss fpqpaavyai hahqqlphgf
      961 tnmahvtqah vqtgitaapp phpgaphppq vmllhppqsh ggppqgavpq sgvpalsast
     1021 pspypyighp qalsdpdcll t
//
LOCUS       XP_061009092             990 aa            linear   MAM 02-DEC-2023
DEFINITION  ataxin-2-like protein isoform X8 [Dama dama].
ACCESSION   XP_061009092
VERSION     XP_061009092.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153109.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..990
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..990
                     /product="ataxin-2-like protein isoform X8"
                     /calculated_mol_wt=104682
     Region          36..109
                     /region_name="SM-ATX"
                     /note="Ataxin 2 SM domain; pfam14438"
                     /db_xref="CDD:464173"
     Region          177..239
                     /region_name="LsmAD"
                     /note="LsmAD domain; pfam06741"
                     /db_xref="CDD:461998"
     Region          <349..856
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          665..>884
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     CDS             1..990
                     /gene="ATXN2L"
                     /coded_by="XM_061153109.1:47..3019"
                     /db_xref="GeneID:133063574"
ORIGIN      
        1 mlclmtrpfs slggqstgkg ppqspvfegv ynnsrmlhfl tavvgstcdv kvkngttyeg
       61 ifktlsskfe lavdavhrkv sepaggprre divdtmvfkp sdvmlvhfrn vdfnyatkdk
      121 ftdsaiamns kvngehkekv lqrweggdsn sddydlesdm sngwdpnemf kfneenygvk
      181 ttydsslssy tvplekdnse efrqrelraa qlareiessp qyrlriamen ddgrteeekh
      241 savqrqgsgr espslaareg kyiplpqrvr egprggvrcs ssrggrpgls slpprgphhl
      301 dnsspgpgse arginggpsr mspkaqrplr gakslsspss rpsgeasvpp ppavgrmypp
      361 rspksaapap isascpeppi gsavltssas ipvtsavgdp gvgsvspasp kislaptdvk
      421 elpakepgrt lesqelsria gkvpglqneq krsqleelrk fgaqfklqps sspetsldpf
      481 pprilkeeak gkekevdgll aseplgspvs skaesvsdke dkpplppagg aegpeqpppp
      541 cpsqtgsppv glikgddkde gpvaeqvkks tlnpnakefn ptkpllsvnk ststptspgp
      601 rthstpsipv ltagqsglys pqyisyipqi hmgpavqapq mypypvsnsv pgqqgkyrga
      661 kgslppqrsd qhqpasappm mqaaaaaagp plvaatpyss yipynpqqfp gqpammqpma
      721 hypsqpvfap mlqsnprmlt sgshpqaivs sstpqypsae qptpqalyat vhqsyphhat
      781 qlhahqpqpa ttptgsqpps qhaapspvqh qagqaphlgs gqpqqnlyhp galtgtppsl
      841 ppgpsaqspq ssfpqpaavy aihahqqlph gftnmahvtq ahvqtgitaa ppphpgaphp
      901 pqvmllhppq shggppqgav pqsgvpalsa stpspypyig hpqgeqpgqa pgfpggaddr
      961 irefslaggi whgradglqv gqdarvlgge
//
LOCUS       XP_061009093             955 aa            linear   MAM 02-DEC-2023
DEFINITION  ataxin-2-like protein isoform X9 [Dama dama].
ACCESSION   XP_061009093
VERSION     XP_061009093.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153110.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..955
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..955
                     /product="ataxin-2-like protein isoform X9"
                     /calculated_mol_wt=100956
     Region          1..74
                     /region_name="SM-ATX"
                     /note="Ataxin 2 SM domain; pfam14438"
                     /db_xref="CDD:464173"
     Region          142..204
                     /region_name="LsmAD"
                     /note="LsmAD domain; pfam06741"
                     /db_xref="CDD:461998"
     Region          <314..821
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          630..>849
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     CDS             1..955
                     /gene="ATXN2L"
                     /coded_by="XM_061153110.1:185..3052"
                     /db_xref="GeneID:133063574"
ORIGIN      
        1 mlhfltavvg stcdvkvkng ttyegifktl sskfelavda vhrkvsepag gprredivdt
       61 mvfkpsdvml vhfrnvdfny atkdkftdsa iamnskvnge hkekvlqrwe ggdsnsddyd
      121 lesdmsngwd pnemfkfnee nygvkttyds slssytvple kdnseefrqr elraaqlare
      181 iesspqyrlr iamenddgrt eeekhsavqr qgsgrespsl aaregkyipl pqrvregprg
      241 gvrcsssrgg rpglsslppr gphhldnssp gpgseargin ggpsrmspka qrplrgaksl
      301 sspssrpsge asvppppavg rmypprspks aapapisasc peppigsavl tssasipvts
      361 avgdpgvgsv spaspkisla ptdvkelpak epgrtlesqe lsriagkvpg lqneqkrsql
      421 eelrkfgaqf klqpssspet sldpfppril keeakgkeke vdgllasepl gspvsskaes
      481 vsdkedkppl ppaggaegpe qppppcpsqt gsppvglikg ddkdegpvae qvkkstlnpn
      541 akefnptkpl lsvnkststp tspgprthst psipvltagq sglyspqyis yipqihmgpa
      601 vqapqmypyp vsnsvpgqqg kyrgakgslp pqrsdqhqpa sappmmqaaa aaagpplvaa
      661 tpyssyipyn pqqfpgqpam mqpmahypsq pvfapmlqsn prmltsgshp qaivssstpq
      721 ypsaeqptpq alyatvhqsy phhatqlhah qpqpattptg sqppsqhaap spvqhqagqa
      781 phlgsgqpqq nlyhpgaltg tppslppgps aqspqssfpq paavyaihah qqlphgftnm
      841 ahvtqahvqt gitaappphp gaphppqvml lhppqshggp pqgavpqsgv palsastpsp
      901 ypyighpqge qpgqapgfpg gaddrirefs laggiwhgra dglqvgqdar vlgge
//
LOCUS       XP_061009094             955 aa            linear   MAM 02-DEC-2023
DEFINITION  ataxin-2-like protein isoform X9 [Dama dama].
ACCESSION   XP_061009094
VERSION     XP_061009094.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153111.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..955
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..955
                     /product="ataxin-2-like protein isoform X9"
                     /calculated_mol_wt=100956
     Region          1..74
                     /region_name="SM-ATX"
                     /note="Ataxin 2 SM domain; pfam14438"
                     /db_xref="CDD:464173"
     Region          142..204
                     /region_name="LsmAD"
                     /note="LsmAD domain; pfam06741"
                     /db_xref="CDD:461998"
     Region          <314..821
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          630..>849
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     CDS             1..955
                     /gene="ATXN2L"
                     /coded_by="XM_061153111.1:142..3009"
                     /db_xref="GeneID:133063574"
ORIGIN      
        1 mlhfltavvg stcdvkvkng ttyegifktl sskfelavda vhrkvsepag gprredivdt
       61 mvfkpsdvml vhfrnvdfny atkdkftdsa iamnskvnge hkekvlqrwe ggdsnsddyd
      121 lesdmsngwd pnemfkfnee nygvkttyds slssytvple kdnseefrqr elraaqlare
      181 iesspqyrlr iamenddgrt eeekhsavqr qgsgrespsl aaregkyipl pqrvregprg
      241 gvrcsssrgg rpglsslppr gphhldnssp gpgseargin ggpsrmspka qrplrgaksl
      301 sspssrpsge asvppppavg rmypprspks aapapisasc peppigsavl tssasipvts
      361 avgdpgvgsv spaspkisla ptdvkelpak epgrtlesqe lsriagkvpg lqneqkrsql
      421 eelrkfgaqf klqpssspet sldpfppril keeakgkeke vdgllasepl gspvsskaes
      481 vsdkedkppl ppaggaegpe qppppcpsqt gsppvglikg ddkdegpvae qvkkstlnpn
      541 akefnptkpl lsvnkststp tspgprthst psipvltagq sglyspqyis yipqihmgpa
      601 vqapqmypyp vsnsvpgqqg kyrgakgslp pqrsdqhqpa sappmmqaaa aaagpplvaa
      661 tpyssyipyn pqqfpgqpam mqpmahypsq pvfapmlqsn prmltsgshp qaivssstpq
      721 ypsaeqptpq alyatvhqsy phhatqlhah qpqpattptg sqppsqhaap spvqhqagqa
      781 phlgsgqpqq nlyhpgaltg tppslppgps aqspqssfpq paavyaihah qqlphgftnm
      841 ahvtqahvqt gitaappphp gaphppqvml lhppqshggp pqgavpqsgv palsastpsp
      901 ypyighpqge qpgqapgfpg gaddrirefs laggiwhgra dglqvgqdar vlgge
//
LOCUS       XP_061009095             955 aa            linear   MAM 02-DEC-2023
DEFINITION  ataxin-2-like protein isoform X9 [Dama dama].
ACCESSION   XP_061009095
VERSION     XP_061009095.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153112.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..955
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..955
                     /product="ataxin-2-like protein isoform X9"
                     /calculated_mol_wt=100956
     Region          1..74
                     /region_name="SM-ATX"
                     /note="Ataxin 2 SM domain; pfam14438"
                     /db_xref="CDD:464173"
     Region          142..204
                     /region_name="LsmAD"
                     /note="LsmAD domain; pfam06741"
                     /db_xref="CDD:461998"
     Region          <314..821
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          630..>849
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     CDS             1..955
                     /gene="ATXN2L"
                     /coded_by="XM_061153112.1:159..3026"
                     /db_xref="GeneID:133063574"
ORIGIN      
        1 mlhfltavvg stcdvkvkng ttyegifktl sskfelavda vhrkvsepag gprredivdt
       61 mvfkpsdvml vhfrnvdfny atkdkftdsa iamnskvnge hkekvlqrwe ggdsnsddyd
      121 lesdmsngwd pnemfkfnee nygvkttyds slssytvple kdnseefrqr elraaqlare
      181 iesspqyrlr iamenddgrt eeekhsavqr qgsgrespsl aaregkyipl pqrvregprg
      241 gvrcsssrgg rpglsslppr gphhldnssp gpgseargin ggpsrmspka qrplrgaksl
      301 sspssrpsge asvppppavg rmypprspks aapapisasc peppigsavl tssasipvts
      361 avgdpgvgsv spaspkisla ptdvkelpak epgrtlesqe lsriagkvpg lqneqkrsql
      421 eelrkfgaqf klqpssspet sldpfppril keeakgkeke vdgllasepl gspvsskaes
      481 vsdkedkppl ppaggaegpe qppppcpsqt gsppvglikg ddkdegpvae qvkkstlnpn
      541 akefnptkpl lsvnkststp tspgprthst psipvltagq sglyspqyis yipqihmgpa
      601 vqapqmypyp vsnsvpgqqg kyrgakgslp pqrsdqhqpa sappmmqaaa aaagpplvaa
      661 tpyssyipyn pqqfpgqpam mqpmahypsq pvfapmlqsn prmltsgshp qaivssstpq
      721 ypsaeqptpq alyatvhqsy phhatqlhah qpqpattptg sqppsqhaap spvqhqagqa
      781 phlgsgqpqq nlyhpgaltg tppslppgps aqspqssfpq paavyaihah qqlphgftnm
      841 ahvtqahvqt gitaappphp gaphppqvml lhppqshggp pqgavpqsgv palsastpsp
      901 ypyighpqge qpgqapgfpg gaddrirefs laggiwhgra dglqvgqdar vlgge
//
LOCUS       XP_061009096            1100 aa            linear   MAM 02-DEC-2023
DEFINITION  ataxin-2-like protein isoform X10 [Dama dama].
ACCESSION   XP_061009096
VERSION     XP_061009096.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153113.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1100
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1100
                     /product="ataxin-2-like protein isoform X10"
                     /calculated_mol_wt=115370
     Region          124..197
                     /region_name="SM-ATX"
                     /note="Ataxin 2 SM domain; pfam14438"
                     /db_xref="CDD:464173"
     Region          265..327
                     /region_name="LsmAD"
                     /note="LsmAD domain; pfam06741"
                     /db_xref="CDD:461998"
     Region          <437..944
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          753..>972
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     CDS             1..1100
                     /gene="ATXN2L"
                     /coded_by="XM_061153113.1:540..3842"
                     /db_xref="GeneID:133063574"
ORIGIN      
        1 mlkpqppqqt sqpqqppptq qavarrppgg tsppngglpg plastsappg ppaaaspclg
       61 paaaagsglr rgaegilapq ppppqqqhqe rqgaaaigsa rgqstgkgpp qspvfegvyn
      121 nsrmlhflta vvgstcdvkv kngttyegif ktlsskfela vdavhrkvse paggprredi
      181 vdtmvfkpsd vmlvhfrnvd fnyatkdkft dsaiamnskv ngehkekvlq rweggdsnsd
      241 dydlesdmsn gwdpnemfkf neenygvktt ydsslssytv plekdnseef rqrelraaql
      301 areiesspqy rlriamendd grteeekhsa vqrqgsgres pslaaregky iplpqrvreg
      361 prggvrcsss rggrpglssl pprgphhldn sspgpgsear ginggpsrms pkaqrplrga
      421 kslsspssrp sgeasvpppp avgrmypprs pksaapapis ascpeppigs avltssasip
      481 vtsavgdpgv gsvspaspki slaptdvkel pakepgrtle sqelsriagk vpglqneqkr
      541 sqleelrkfg aqfklqpsss petsldpfpp rilkeeakgk ekevdgllas eplgspvssk
      601 aesvsdkedk pplppaggae gpeqppppcp sqtgsppvgl ikgddkdegp vaeqvkkstl
      661 npnakefnpt kpllsvnkst stptspgprt hstpsipvlt agqsglyspq yisyipqihm
      721 gpavqapqmy pypvsnsvpg qqgkyrgakg slppqrsdqh qpasappmmq aaaaaagppl
      781 vaatpyssyi pynpqqfpgq pammqpmahy psqpvfapml qsnprmltsg shpqaivsss
      841 tpqypsaeqp tpqalyatvh qsyphhatql hahqpqpatt ptgsqppsqh aapspvqhqa
      901 gqaphlgsgq pqqnlyhpga ltgtppslpp gpsaqspqss fpqpaavyai hahqqlphgf
      961 tnmahvtqah vqtgitaapp phpgaphppq vmllhppqsh ggppqgavpq sgvpalsast
     1021 pspypyighp qgeqpgqapg fpggaddril crvgrshsrr rqglapgsvl cfppsslscd
     1081 paaplptasp alsdpdcllt
//
LOCUS       XP_061009098            1015 aa            linear   MAM 02-DEC-2023
DEFINITION  ataxin-2-like protein isoform X11 [Dama dama].
ACCESSION   XP_061009098
VERSION     XP_061009098.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153115.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1015
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1015
                     /product="ataxin-2-like protein isoform X11"
                     /calculated_mol_wt=105697
     Region          124..197
                     /region_name="SM-ATX"
                     /note="Ataxin 2 SM domain; pfam14438"
                     /db_xref="CDD:464173"
     Region          <370..881
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          690..>909
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     CDS             1..1015
                     /gene="ATXN2L"
                     /coded_by="XM_061153115.1:547..3594"
                     /db_xref="GeneID:133063574"
ORIGIN      
        1 mlkpqppqqt sqpqqppptq qavarrppgg tsppngglpg plastsappg ppaaaspclg
       61 paaaagsglr rgaegilapq ppppqqqhqe rqgaaaigsa rgqstgkgpp qspvfegvyn
      121 nsrmlhflta vvgstcdvkv kngttyegif ktlsskfela vdavhrkvse paggprredi
      181 vdtmvfkpsd vmlvhfrnvd fnyatkdkft dsaiamnskv ngehkekrrt iqknsvsgsf
      241 vlpswperln rapstacgsp wrmmtgaqrr rstvrfsdra qgvrapawqp grgsislyps
      301 efgkvpgeaf aavvlgaagl alalcrlval tiltiaalaq vlrhavsmea qrplrgaksl
      361 sspssrpsge asvppppavg rmypprspks aapapisasc peppigsavl tssasipvts
      421 avgdpgvgsv spaspkisla ptdvkelpak epgrtlesqe lsriagkvpg lqneqkrsql
      481 eelrkfgaqf klqpssspet sldpfppril keeakgkeke vdgllasepl gspvsskaes
      541 vsdkedkppl ppaggaegpe qppppcpsqt gsppvglikg ddkdegpvae qvkkstlnpn
      601 akefnptkpl lsvnkststp tspgprthst psipvltagq sglyspqyis yipqihmgpa
      661 vqapqmypyp vsnsvpgqqg kyrgakgslp pqrsdqhqpa sappmmqaaa aaagpplvaa
      721 tpyssyipyn pqqfpgqpam mqpmahypsq pvfapmlqsn prmltsgshp qaivssstpq
      781 ypsaeqptpq alyatvhqsy phhatqlhah qpqpattptg sqppsqhaap spvqhqagqa
      841 phlgsgqpqq nlyhpgaltg tppslppgps aqspqssfpq paavyaihah qqlphgftnm
      901 ahvtqahvqt gitaappphp gaphppqvml lhppqshggp pqgavpqsgv palsastpsp
      961 ypyighpqge qpgqapgfpg gaddrirefs laggiwhgra dglqvgqdar vlgge
//
LOCUS       XP_061009099             994 aa            linear   MAM 02-DEC-2023
DEFINITION  ataxin-2-like protein isoform X12 [Dama dama].
ACCESSION   XP_061009099
VERSION     XP_061009099.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153116.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..994
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..994
                     /product="ataxin-2-like protein isoform X12"
                     /calculated_mol_wt=104989
     Region          124..197
                     /region_name="SM-ATX"
                     /note="Ataxin 2 SM domain; pfam14438"
                     /db_xref="CDD:464173"
     Region          265..327
                     /region_name="LsmAD"
                     /note="LsmAD domain; pfam06741"
                     /db_xref="CDD:461998"
     Region          <437..944
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          753..>981
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     CDS             1..994
                     /gene="ATXN2L"
                     /coded_by="XM_061153116.1:539..3523"
                     /db_xref="GeneID:133063574"
ORIGIN      
        1 mlkpqppqqt sqpqqppptq qavarrppgg tsppngglpg plastsappg ppaaaspclg
       61 paaaagsglr rgaegilapq ppppqqqhqe rqgaaaigsa rgqstgkgpp qspvfegvyn
      121 nsrmlhflta vvgstcdvkv kngttyegif ktlsskfela vdavhrkvse paggprredi
      181 vdtmvfkpsd vmlvhfrnvd fnyatkdkft dsaiamnskv ngehkekvlq rweggdsnsd
      241 dydlesdmsn gwdpnemfkf neenygvktt ydsslssytv plekdnseef rqrelraaql
      301 areiesspqy rlriamendd grteeekhsa vqrqgsgres pslaaregky iplpqrvreg
      361 prggvrcsss rggrpglssl pprgphhldn sspgpgsear ginggpsrms pkaqrplrga
      421 kslsspssrp sgeasvpppp avgrmypprs pksaapapis ascpeppigs avltssasip
      481 vtsavgdpgv gsvspaspki slaptdvkel pakepgrtle sqelsriagk vpglqneqkr
      541 sqleelrkfg aqfklqpsss petsldpfpp rilkeeakgk ekevdgllas eplgspvssk
      601 aesvsdkedk pplppaggae gpeqppppcp sqtgsppvgl ikgddkdegp vaeqvkkstl
      661 npnakefnpt kpllsvnkst stptspgprt hstpsipvlt agqsglyspq yisyipqihm
      721 gpavqapqmy pypvsnsvpg qqgkyrgakg slppqrsdqh qpasappmmq aaaaaagppl
      781 vaatpyssyi pynpqqfpgq pammqpmahy psqpvfapml qsnprmltsg shpqaivsss
      841 tpqypsaeqp tpqalyatvh qsyphhatql hahqpqpatt ptgsqppsqh aapspvqhqa
      901 gqaphlgsgq pqqnlyhpga ltgtppslpp gpsaqspqss fpqpaavyai hahqqlphgf
      961 tnmahvtqvs slarrldfqe epmtgflpfh ppgn
//
LOCUS       XP_061009100             504 aa            linear   MAM 02-DEC-2023
DEFINITION  elongation factor Tu, mitochondrial, partial [Dama dama].
ACCESSION   XP_061009100
VERSION     XP_061009100.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153117.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         <1..504
                     /product="elongation factor Tu, mitochondrial"
     Region          99..489
                     /region_name="TufA"
                     /note="Translation elongation factor EF-Tu, a GTPase
                     [Translation, ribosomal structure and biogenesis];
                     COG0050"
                     /db_xref="CDD:439820"
     CDS             1..504
                     /gene="TUFM"
                     /coded_by="XM_061153117.1:<1..1515"
                     /db_xref="GeneID:133063576"
ORIGIN      
        1 qghrnwrlea prlalsalts agsavhpqlp fryctrrrpc pvhlstgast ttmaaatllr
       61 atplfsglga gpapllqgll rplkapalpi lcrglaveak kayvrdkphv nvgtighvdh
      121 gkttltaait kilaegggak fkkyeeidna peerargiti naahveysta arhyahtdcp
      181 ghadyvknmi tgtapldgci lvvaandgpm pqtrehllla rqigvehvvv yvnkadavqd
      241 semvelvele irelltefgy kgeetpiivg salcaleqrd pelglksvqk lldavdtyip
      301 vptrdlekpf llpvesvysi pgrgtvvtgt lergilkkgd eceflghskn irtvvtgiem
      361 fhksldraea gdnlgalvrg lkredlrrgl vmakpgsiqp hqkveaqvyi lskeeggrhk
      421 pfvshfmpvm fsltwdmacr iilppgkela mpgedlkltl ilrqpmilek gqrftlrdgn
      481 rtigtglvtd tpamteedkn ikws
//
LOCUS       XP_061009101             912 aa            linear   MAM 02-DEC-2023
DEFINITION  eukaryotic translation initiation factor 3 subunit C [Dama dama].
ACCESSION   XP_061009101
VERSION     XP_061009101.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153118.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..912
                     /product="eukaryotic translation initiation factor 3
                     subunit C"
                     /calculated_mol_wt=105249
     Region          29..704
                     /region_name="eIF-3c_N"
                     /note="Eukaryotic translation initiation factor 3 subunit
                     8 N-terminus; pfam05470"
                     /db_xref="CDD:428482"
     Region          777..865
                     /region_name="PINT"
                     /note="motif in proteasome subunits, Int-6, Nip-1 and
                     TRIP-15; smart00088"
                     /db_xref="CDD:214509"
     CDS             1..912
                     /gene="LOC133063577"
                     /coded_by="XM_061153118.1:140..2878"
                     /db_xref="GeneID:133063577"
ORIGIN      
        1 msrffttgsd sesesslsge elvtkpvggn ygkqplllse deedtkrvvr sakdkrfeel
       61 tnlirtirna mkirdvtkcl eefellgkay gkaksivdke gvprfyiril adledylnel
      121 wedkegkkkm nknnakalst lrqkirkynr dfeshitnyk qnpeqsaded aekneedseg
      181 ssdededddg vtaaaflkkk seapsgesrk flkkededed sedsedseaw dtsstssdsd
      241 seeeegkqtv lasrflkkap tteedkkaae kkredkakkk hdrksrrpde eeedneggew
      301 ervrggvplv kekpkmfakg teithavvik klneilqarg kkgtdraaqi ellqllvqia
      361 sennlgegvi vkikfniias lydynpnlat ymkpemwqkc ldcinelmdi lfanpnifvg
      421 enileesenl hnadqplrvr gciltlverm deeftkimqn tdphsqeyve hlkdeaqvca
      481 iiervqryle ekgtteeicr iylrrilhty ykfdykahqr qltppegssk seqdqaeneg
      541 edsavlmerl ckyiyakdrt drirtcailc hiyhhalhsr wyqardlmlm shlqdniqha
      601 dppvqilynr tmvqlgicaf rqgltkdahn alldiqssgr akellgqgll lrslqernqe
      661 qekverrrqv pfhlhinlel lecvylvsam lleipymaah esdarrrmis kqfhhqlrvg
      721 erqpllgppe smrehvvaas kamkmgdwkt chsfiinekm ngkvwdlfpe adkvrtmlvr
      781 kiqeeslrty lftyssvyds ismetlsdmf eldlptvhsi iskmiineel masldqptqt
      841 vvmhrtepta qqnlalqlae klgslvenne rvfdhkqgty ggyfrdqkdg yrknegymrr
      901 ggyrqqqsqt ay
//
LOCUS       XP_061009103             912 aa            linear   MAM 02-DEC-2023
DEFINITION  eukaryotic translation initiation factor 3 subunit C [Dama dama].
ACCESSION   XP_061009103
VERSION     XP_061009103.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153120.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..912
                     /product="eukaryotic translation initiation factor 3
                     subunit C"
                     /calculated_mol_wt=105249
     Region          29..704
                     /region_name="eIF-3c_N"
                     /note="Eukaryotic translation initiation factor 3 subunit
                     8 N-terminus; pfam05470"
                     /db_xref="CDD:428482"
     Region          777..865
                     /region_name="PINT"
                     /note="motif in proteasome subunits, Int-6, Nip-1 and
                     TRIP-15; smart00088"
                     /db_xref="CDD:214509"
     CDS             1..912
                     /gene="LOC133063577"
                     /coded_by="XM_061153120.1:132..2870"
                     /db_xref="GeneID:133063577"
ORIGIN      
        1 msrffttgsd sesesslsge elvtkpvggn ygkqplllse deedtkrvvr sakdkrfeel
       61 tnlirtirna mkirdvtkcl eefellgkay gkaksivdke gvprfyiril adledylnel
      121 wedkegkkkm nknnakalst lrqkirkynr dfeshitnyk qnpeqsaded aekneedseg
      181 ssdededddg vtaaaflkkk seapsgesrk flkkededed sedsedseaw dtsstssdsd
      241 seeeegkqtv lasrflkkap tteedkkaae kkredkakkk hdrksrrpde eeedneggew
      301 ervrggvplv kekpkmfakg teithavvik klneilqarg kkgtdraaqi ellqllvqia
      361 sennlgegvi vkikfniias lydynpnlat ymkpemwqkc ldcinelmdi lfanpnifvg
      421 enileesenl hnadqplrvr gciltlverm deeftkimqn tdphsqeyve hlkdeaqvca
      481 iiervqryle ekgtteeicr iylrrilhty ykfdykahqr qltppegssk seqdqaeneg
      541 edsavlmerl ckyiyakdrt drirtcailc hiyhhalhsr wyqardlmlm shlqdniqha
      601 dppvqilynr tmvqlgicaf rqgltkdahn alldiqssgr akellgqgll lrslqernqe
      661 qekverrrqv pfhlhinlel lecvylvsam lleipymaah esdarrrmis kqfhhqlrvg
      721 erqpllgppe smrehvvaas kamkmgdwkt chsfiinekm ngkvwdlfpe adkvrtmlvr
      781 kiqeeslrty lftyssvyds ismetlsdmf eldlptvhsi iskmiineel masldqptqt
      841 vvmhrtepta qqnlalqlae klgslvenne rvfdhkqgty ggyfrdqkdg yrknegymrr
      901 ggyrqqqsqt ay
//
LOCUS       XP_061009104             912 aa            linear   MAM 02-DEC-2023
DEFINITION  eukaryotic translation initiation factor 3 subunit C [Dama dama].
ACCESSION   XP_061009104
VERSION     XP_061009104.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153121.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..912
                     /product="eukaryotic translation initiation factor 3
                     subunit C"
                     /calculated_mol_wt=105249
     Region          29..704
                     /region_name="eIF-3c_N"
                     /note="Eukaryotic translation initiation factor 3 subunit
                     8 N-terminus; pfam05470"
                     /db_xref="CDD:428482"
     Region          777..865
                     /region_name="PINT"
                     /note="motif in proteasome subunits, Int-6, Nip-1 and
                     TRIP-15; smart00088"
                     /db_xref="CDD:214509"
     CDS             1..912
                     /gene="LOC133063577"
                     /coded_by="XM_061153121.1:91..2829"
                     /db_xref="GeneID:133063577"
ORIGIN      
        1 msrffttgsd sesesslsge elvtkpvggn ygkqplllse deedtkrvvr sakdkrfeel
       61 tnlirtirna mkirdvtkcl eefellgkay gkaksivdke gvprfyiril adledylnel
      121 wedkegkkkm nknnakalst lrqkirkynr dfeshitnyk qnpeqsaded aekneedseg
      181 ssdededddg vtaaaflkkk seapsgesrk flkkededed sedsedseaw dtsstssdsd
      241 seeeegkqtv lasrflkkap tteedkkaae kkredkakkk hdrksrrpde eeedneggew
      301 ervrggvplv kekpkmfakg teithavvik klneilqarg kkgtdraaqi ellqllvqia
      361 sennlgegvi vkikfniias lydynpnlat ymkpemwqkc ldcinelmdi lfanpnifvg
      421 enileesenl hnadqplrvr gciltlverm deeftkimqn tdphsqeyve hlkdeaqvca
      481 iiervqryle ekgtteeicr iylrrilhty ykfdykahqr qltppegssk seqdqaeneg
      541 edsavlmerl ckyiyakdrt drirtcailc hiyhhalhsr wyqardlmlm shlqdniqha
      601 dppvqilynr tmvqlgicaf rqgltkdahn alldiqssgr akellgqgll lrslqernqe
      661 qekverrrqv pfhlhinlel lecvylvsam lleipymaah esdarrrmis kqfhhqlrvg
      721 erqpllgppe smrehvvaas kamkmgdwkt chsfiinekm ngkvwdlfpe adkvrtmlvr
      781 kiqeeslrty lftyssvyds ismetlsdmf eldlptvhsi iskmiineel masldqptqt
      841 vvmhrtepta qqnlalqlae klgslvenne rvfdhkqgty ggyfrdqkdg yrknegymrr
      901 ggyrqqqsqt ay
//
LOCUS       XP_061009105            1014 aa            linear   MAM 02-DEC-2023
DEFINITION  apolipoprotein B receptor [Dama dama].
ACCESSION   XP_061009105
VERSION     XP_061009105.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153122.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1014
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1014
                     /product="apolipoprotein B receptor"
                     /calculated_mol_wt=108615
     Region          <32..530
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          <658..>900
                     /region_name="2A1904"
                     /note="K+-dependent Na+/Ca+ exchanger; TIGR00927"
                     /db_xref="CDD:273344"
     CDS             1..1014
                     /gene="APOBR"
                     /coded_by="XM_061153122.1:79..3123"
                     /db_xref="GeneID:133063578"
ORIGIN      
        1 mdflrlhlpg lhqalrgald slntfvsyli gdevptverk eacaaeelre vaagrplgkv
       61 eeeaqealeg lggsqskedg glrqpgetgr cweessateq tsgggegssh gsqaerqdte
      121 dweaakairc qdsgiplear kkseagqdrr sqalesqehd eqevkreetl rtweweeeev
      181 ratepgvvgg veserawhke pegkagadgh kvagdgkese qvvseaaaee iqgpgakgag
      241 reegvvvvrc grspralgtq epgaesedge asgreeadlp gveeaeygav pekripegtg
      301 rvwaleetsk rdqeeevden retevslfpe qtqvlgtrrv eaeakgqaag reteegprsv
      361 gevregfegq adraeeeavg rqdsevkagq aslkavvqte eakeqkkesc sateaelpqa
      421 kvaneakgda dleatpearp qqfnggreee etqtgdeale eergglehkv tggqepelmg
      481 gpqttteqle egpvgkeelq silalsreet grslqeyprh vghvnpnssv teawenrrkd
      541 verddaqeek gdaeegeeea trgqasvvea aggrelarpa ipeaggewme awhgaeeaea
      601 pgaenqeqgr rhgaeagtgq flgeldiret qeeeveapgp fgedrpsgrg wrleavavnp
      661 qssegpeans laiemvedka aldggalgpg eepereagda fgrawdlegr eeahrgelve
      721 aaegekrrgq efglegsaee evpgqgrqae apeatlegkp egevtglges agaegicevd
      781 dfplgpqalr akdlpggqal wegeaggwra reqgqsgegq hgnqhpeegk aqrpldveda
      841 gvtggqkaea aetdpdgled iqvledvqal edqstnegpa eaepgprgea dgsagqdadg
      901 kwgeallpgs rldvsvsrsr vflsrsssqr rsrpsfrrtp apeppeepps ppteeepsap
      961 eqriqpeqpp eprpprpegt plparrsplg qgfglahpgm mqelrarlgq pkpq
//
LOCUS       XP_061009106             542 aa            linear   MAM 02-DEC-2023
DEFINITION  battenin isoform X1 [Dama dama].
ACCESSION   XP_061009106
VERSION     XP_061009106.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153123.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..542
                     /product="battenin isoform X1"
                     /calculated_mol_wt=59787
     Region          147..541
                     /region_name="CLN3"
                     /note="CLN3 protein; pfam02487"
                     /db_xref="CDD:460570"
     CDS             1..542
                     /gene="CLN3"
                     /coded_by="XM_061153123.1:371..1999"
                     /db_xref="GeneID:133063579"
ORIGIN      
        1 mllyhleevl nrwfqdspsl ylsyapklgr sktkaerrpg sgedlearde gthrcchvtl
       61 clrvrvrnvq lllktlirpt gakfelslts dsrgdqnlkp weavrarrga friprgrrqt
      121 rhlglrcktv rapigrtrwa sgewpellgl cnnfsyvvml saahdilshq rtpgnqshvd
      181 pdstptshns ssrfdcnpvs taavlladil ptliikllap lglhllpysp rvltsgicaa
      241 gsfllvafsh svtislcgvv lasissglge vtflsltafy praviscwss gtggagllga
      301 lsylgltqag lspqhtllsm lgipalllas yfllltspgp qdlrgeedsd psarqplinn
      361 esseskpgsg splslqerwt vfkgllhyiv plvlvyfaey finqglfell ffrntfltha
      421 qqyrwyqmly qagvfasrss lrccrirhtw ilallqclnl afllvdvwls flpsiylifl
      481 iivyegllgg aayvntfhni avetsdehre famatacisd tlgislsgll alplhdflcq
      541 ls
//
LOCUS       XP_061009108             531 aa            linear   MAM 02-DEC-2023
DEFINITION  battenin isoform X2 [Dama dama].
ACCESSION   XP_061009108
VERSION     XP_061009108.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153125.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..531
                     /product="battenin isoform X2"
                     /calculated_mol_wt=58468
     Region          136..530
                     /region_name="CLN3"
                     /note="CLN3 protein; pfam02487"
                     /db_xref="CDD:460570"
     CDS             1..531
                     /gene="CLN3"
                     /coded_by="XM_061153125.1:360..1955"
                     /db_xref="GeneID:133063579"
ORIGIN      
        1 mllyhleevl nrwfqdspsl ylsyapklgr sktkaerrpg sgedlearde gthrcchvtl
       61 clrtlirptg akfelsltsd srgdqnlkpw eavrarrgaf riprgrrqtr hlglrcktvr
      121 apigrtrwas gewpellglc nnfsyvvmls aahdilshqr tpgnqshvdp dstptshnss
      181 srfdcnpvst aavlladilp tliikllapl glhllpyspr vltsgicaag sfllvafshs
      241 vtislcgvvl asissglgev tflsltafyp raviscwssg tggagllgal sylgltqagl
      301 spqhtllsml gipalllasy fllltspgpq dlrgeedsdp sarqplinne sseskpgsgs
      361 plslqerwtv fkgllhyivp lvlvyfaeyf inqglfellf frntflthaq qyrwyqmlyq
      421 agvfasrssl rccrirhtwi lallqclnla fllvdvwlsf lpsiylifli ivyegllgga
      481 ayvntfhnia vetsdehref amatacisdt lgislsglla lplhdflcql s
//
LOCUS       XP_061009109             508 aa            linear   MAM 02-DEC-2023
DEFINITION  battenin isoform X3 [Dama dama].
ACCESSION   XP_061009109
VERSION     XP_061009109.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153126.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..508
                     /product="battenin isoform X3"
                     /calculated_mol_wt=55701
     Region          113..507
                     /region_name="CLN3"
                     /note="CLN3 protein; pfam02487"
                     /db_xref="CDD:460570"
     CDS             1..508
                     /gene="CLN3"
                     /coded_by="XM_061153126.1:344..1870"
                     /db_xref="GeneID:133063579"
ORIGIN      
        1 mkkmqnaalp prgrilpasi sptprswegl krrpredpev tlirptgakf elsltsdsrg
       61 dqnlkpweav rarrgafrip rgrrqtrhlg lrcktvrapi grtrwasgew pellglcnnf
      121 syvvmlsaah dilshqrtpg nqshvdpdst ptshnsssrf dcnpvstaav lladilptli
      181 ikllaplglh llpysprvlt sgicaagsfl lvafshsvti slcgvvlasi ssglgevtfl
      241 sltafyprav iscwssgtgg agllgalsyl gltqaglspq htllsmlgip alllasyfll
      301 ltspgpqdlr geedsdpsar qplinnesse skpgsgspls lqerwtvfkg llhyivplvl
      361 vyfaeyfinq glfellffrn tflthaqqyr wyqmlyqagv fasrsslrcc rirhtwilal
      421 lqclnlafll vdvwlsflps iylifliivy egllggaayv ntfhniavet sdehrefama
      481 tacisdtlgi slsgllalpl hdflcqls
//
LOCUS       XP_061009110             438 aa            linear   MAM 02-DEC-2023
DEFINITION  battenin isoform X4 [Dama dama].
ACCESSION   XP_061009110
VERSION     XP_061009110.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153127.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..438
                     /product="battenin isoform X4"
                     /calculated_mol_wt=47395
     Region          39..437
                     /region_name="CLN3"
                     /note="CLN3 protein; pfam02487"
                     /db_xref="CDD:460570"
     CDS             1..438
                     /gene="CLN3"
                     /coded_by="XM_061153127.1:252..1568"
                     /db_xref="GeneID:133063579"
ORIGIN      
        1 mggctgsprr lsdsegeetd paprpplqds qgahwknavg fwllglcnnf syvvmlsaah
       61 dilshqrtpg nqshvdpdst ptshnsssrf dcnpvstaav lladilptli ikllaplglh
      121 llpysprvlt sgicaagsfl lvafshsvti slcgvvlasi ssglgevtfl sltafyprav
      181 iscwssgtgg agllgalsyl gltqaglspq htllsmlgip alllasyfll ltspgpqdlr
      241 geedsdpsar qplinnesse skpgsgspls lqerwtvfkg llhyivplvl vyfaeyfinq
      301 glfellffrn tflthaqqyr wyqmlyqagv fasrsslrcc rirhtwilal lqclnlafll
      361 vdvwlsflps iylifliivy egllggaayv ntfhniavet sdehrefama tacisdtlgi
      421 slsgllalpl hdflcqls
//
LOCUS       XP_061009111             438 aa            linear   MAM 02-DEC-2023
DEFINITION  battenin isoform X4 [Dama dama].
ACCESSION   XP_061009111
VERSION     XP_061009111.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153128.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..438
                     /product="battenin isoform X4"
                     /calculated_mol_wt=47395
     Region          39..437
                     /region_name="CLN3"
                     /note="CLN3 protein; pfam02487"
                     /db_xref="CDD:460570"
     CDS             1..438
                     /gene="CLN3"
                     /coded_by="XM_061153128.1:219..1535"
                     /db_xref="GeneID:133063579"
ORIGIN      
        1 mggctgsprr lsdsegeetd paprpplqds qgahwknavg fwllglcnnf syvvmlsaah
       61 dilshqrtpg nqshvdpdst ptshnsssrf dcnpvstaav lladilptli ikllaplglh
      121 llpysprvlt sgicaagsfl lvafshsvti slcgvvlasi ssglgevtfl sltafyprav
      181 iscwssgtgg agllgalsyl gltqaglspq htllsmlgip alllasyfll ltspgpqdlr
      241 geedsdpsar qplinnesse skpgsgspls lqerwtvfkg llhyivplvl vyfaeyfinq
      301 glfellffrn tflthaqqyr wyqmlyqagv fasrsslrcc rirhtwilal lqclnlafll
      361 vdvwlsflps iylifliivy egllggaayv ntfhniavet sdehrefama tacisdtlgi
      421 slsgllalpl hdflcqls
//
LOCUS       XP_061009112             438 aa            linear   MAM 02-DEC-2023
DEFINITION  battenin isoform X4 [Dama dama].
ACCESSION   XP_061009112
VERSION     XP_061009112.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153129.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..438
                     /product="battenin isoform X4"
                     /calculated_mol_wt=47395
     Region          39..437
                     /region_name="CLN3"
                     /note="CLN3 protein; pfam02487"
                     /db_xref="CDD:460570"
     CDS             1..438
                     /gene="CLN3"
                     /coded_by="XM_061153129.1:177..1493"
                     /db_xref="GeneID:133063579"
ORIGIN      
        1 mggctgsprr lsdsegeetd paprpplqds qgahwknavg fwllglcnnf syvvmlsaah
       61 dilshqrtpg nqshvdpdst ptshnsssrf dcnpvstaav lladilptli ikllaplglh
      121 llpysprvlt sgicaagsfl lvafshsvti slcgvvlasi ssglgevtfl sltafyprav
      181 iscwssgtgg agllgalsyl gltqaglspq htllsmlgip alllasyfll ltspgpqdlr
      241 geedsdpsar qplinnesse skpgsgspls lqerwtvfkg llhyivplvl vyfaeyfinq
      301 glfellffrn tflthaqqyr wyqmlyqagv fasrsslrcc rirhtwilal lqclnlafll
      361 vdvwlsflps iylifliivy egllggaayv ntfhniavet sdehrefama tacisdtlgi
      421 slsgllalpl hdflcqls
//
LOCUS       XP_061009113             432 aa            linear   MAM 02-DEC-2023
DEFINITION  battenin isoform X5 [Dama dama].
ACCESSION   XP_061009113
VERSION     XP_061009113.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153130.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..432
                     /product="battenin isoform X5"
                     /calculated_mol_wt=48500
     Region          147..431
                     /region_name="CLN3"
                     /note="CLN3 protein; pfam02487"
                     /db_xref="CDD:460570"
     CDS             1..432
                     /gene="CLN3"
                     /coded_by="XM_061153130.1:360..1658"
                     /db_xref="GeneID:133063579"
ORIGIN      
        1 mllyhleevl nrwfqdspsl ylsyapklgr sktkaerrpg sgedlearde gthrcchvtl
       61 clrvrvrnvq lllktlirpt gakfelslts dsrgdqnlkp weavrarrga friprgrrqt
      121 rhlglrcktv rapigrtrwa sgewpellgl cnnfsyvvml saahdilshq rtpgnqshvd
      181 pdstptshns ssrfdcnpvs taavlladil ptliikllap lglhllpysp rvltsgicaa
      241 gsfllvafsh svtislcgsg splslqerwt vfkgllhyiv plvlvyfaey finqglfell
      301 ffrntfltha qqyrwyqmly qagvfasrss lrccrirhtw ilallqclnl afllvdvwls
      361 flpsiylifl iivyegllgg aayvntfhni avetsdehre famatacisd tlgislsgll
      421 alplhdflcq ls
//
LOCUS       XP_061009114             270 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-27 subunit alpha isoform X1 [Dama dama].
ACCESSION   XP_061009114
VERSION     XP_061009114.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153131.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..270
                     /product="interleukin-27 subunit alpha isoform X1"
                     /calculated_mol_wt=30084
     CDS             1..270
                     /gene="IL27"
                     /coded_by="XM_061153131.1:528..1340"
                     /db_xref="GeneID:133063580"
ORIGIN      
        1 mciivtavpa gwqewcphlv ekpgtgmfpa lskviletle aakglsllll flllaragvw
       61 gfprppgrpp lslhelqref kvslhlarkl lsavrvqahh faeshlpgvn ldllplgeql
      121 pdvsttfraw rglsdperlc flsltlhpfr tllgglgrqe fwtssermql qvtrldlrdl
      181 qqhlrfqvla agfnlpeehe neeekgllpg algaplqisa qvswsrflyt yrllhslelv
      241 lsrtvrdlll lsragnsiqa lgfptpssqp
//
LOCUS       XP_061009115             253 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-27 subunit alpha isoform X2 [Dama dama].
ACCESSION   XP_061009115
VERSION     XP_061009115.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153132.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..253
                     /product="interleukin-27 subunit alpha isoform X2"
                     /calculated_mol_wt=28125
     CDS             1..253
                     /gene="IL27"
                     /coded_by="XM_061153132.1:1887..2648"
                     /db_xref="GeneID:133063580"
ORIGIN      
        1 mvpsflrpss pqahpsscsl pspispglsl lllflllara gvwgfprppg rpplslhelq
       61 refkvslhla rkllsavrvq ahhfaeshlp gvnldllplg eqlpdvsttf rawrglsdpe
      121 rlcflsltlh pfrtllgglg rqefwtsser mqlqvtrldl rdlqqhlrfq vlaagfnlpe
      181 eheneeekgl lpgalgaplq isaqvswsrf lytyrllhsl elvlsrtvrd llllsragns
      241 iqalgfptps sqp
//
LOCUS       XP_061009116             237 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-27 subunit alpha isoform X3 [Dama dama].
ACCESSION   XP_061009116
VERSION     XP_061009116.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153133.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..237
                     /product="interleukin-27 subunit alpha isoform X3"
                     /calculated_mol_wt=26552
     CDS             1..237
                     /gene="IL27"
                     /coded_by="XM_061153133.1:131..844"
                     /db_xref="GeneID:133063580"
ORIGIN      
        1 mgqtagdlgw rlsllllfll laragvwgfp rppgrpplsl helqrefkvs lhlarkllsa
       61 vrvqahhfae shlpgvnldl lplgeqlpdv sttfrawrgl sdperlcfls ltlhpfrtll
      121 gglgrqefwt ssermqlqvt rldlrdlqqh lrfqvlaagf nlpeehenee ekgllpgalg
      181 aplqisaqvs wsrflytyrl lhslelvlsr tvrdllllsr agnsiqalgf ptpssqp
//
LOCUS       XP_061009117             293 aa            linear   MAM 02-DEC-2023
DEFINITION  SAGA-associated factor 29 [Dama dama].
ACCESSION   XP_061009117
VERSION     XP_061009117.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153134.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..293
                     /product="SAGA-associated factor 29"
                     /calculated_mol_wt=33123
     Region          158..288
                     /region_name="DUF1325"
                     /note="SGF29 tudor-like domain; pfam07039"
                     /db_xref="CDD:462071"
     CDS             1..293
                     /gene="SGF29"
                     /coded_by="XM_061153134.1:217..1098"
                     /db_xref="GeneID:133063582"
ORIGIN      
        1 malvsadsri aelltelhql ikqtqeersr sehnlvniqk thermqtenk ispyyrtklr
       61 glyttakada eaecnilrka ldkiaeiksl leerriaaki aglyndsepp rktmrrgvlm
      121 tllqqsamtl plwigkpgdk ppplcgaipa sgdyvakpgd kvaarvkavd gdeqwilaev
      181 vsyshatnky evddideegk erhtlsrrri iplpqwkanp etdpealfqk eqlvlalypq
      241 ttcfyralih tppqrpqddy svlfedtsya dgyspplnva qryvvackep kkk
//
LOCUS       XP_061009118             461 aa            linear   MAM 02-DEC-2023
DEFINITION  coronin-1A [Dama dama].
ACCESSION   XP_061009118
VERSION     XP_061009118.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153135.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..461
                     /product="coronin-1A"
                     /calculated_mol_wt=50848
     Region          9..461
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          37..79
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          85..129
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          134..171
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          180..215
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          224..263
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          270..311
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..461
                     /gene="CORO1A"
                     /coded_by="XM_061153135.1:161..1546"
                     /db_xref="GeneID:133063583"
ORIGIN      
        1 msrqvvrssk frhvfgqpak adqcyedvrv sqntwdsgfc avnpkfvali ceasgggafl
       61 vlplsktgrv dknvpmvcgh tapvldiawc phndnviasg sedcsvmvwe ipdggltlpl
      121 repvvtlegh tkrvgivawh ptaqnvllsa gcdnvilvwd vgtgaavltl gsdvhpdtiy
      181 svdwsrdgal ictscrdkrv riieprkgti vaekdrpheg trpvravfvs dgkilttgfs
      241 rmserqvalw dtkhleepls lqeldtssgv llpffdpdtn ivylcgkgds siryfeitse
      301 apflhylsmf sskesqrgmg ympkrglevn kceiarfykl herkcepiam tvprksdlfq
      361 edlypptagp daaltaeewl ggrdagplli slkdgyvppk srelrvnrgl dtarkrtape
      421 atgapssdai srleeemrkl qatvqelqkr ldrleetvqa k
//
LOCUS       XP_061009119             461 aa            linear   MAM 02-DEC-2023
DEFINITION  coronin-1A [Dama dama].
ACCESSION   XP_061009119
VERSION     XP_061009119.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153136.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..461
                     /product="coronin-1A"
                     /calculated_mol_wt=50848
     Region          9..461
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          37..79
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          85..129
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          134..171
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          180..215
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          224..263
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          270..311
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..461
                     /gene="CORO1A"
                     /coded_by="XM_061153136.1:137..1522"
                     /db_xref="GeneID:133063583"
ORIGIN      
        1 msrqvvrssk frhvfgqpak adqcyedvrv sqntwdsgfc avnpkfvali ceasgggafl
       61 vlplsktgrv dknvpmvcgh tapvldiawc phndnviasg sedcsvmvwe ipdggltlpl
      121 repvvtlegh tkrvgivawh ptaqnvllsa gcdnvilvwd vgtgaavltl gsdvhpdtiy
      181 svdwsrdgal ictscrdkrv riieprkgti vaekdrpheg trpvravfvs dgkilttgfs
      241 rmserqvalw dtkhleepls lqeldtssgv llpffdpdtn ivylcgkgds siryfeitse
      301 apflhylsmf sskesqrgmg ympkrglevn kceiarfykl herkcepiam tvprksdlfq
      361 edlypptagp daaltaeewl ggrdagplli slkdgyvppk srelrvnrgl dtarkrtape
      421 atgapssdai srleeemrkl qatvqelqkr ldrleetvqa k
//
LOCUS       XP_061009120             295 aa            linear   MAM 02-DEC-2023
DEFINITION  sulfotransferase 1A1 [Dama dama].
ACCESSION   XP_061009120
VERSION     XP_061009120.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153137.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..295
                     /product="sulfotransferase 1A1"
                     /calculated_mol_wt=34350
     Region          38..287
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; pfam00685"
                     /db_xref="CDD:425820"
     CDS             1..295
                     /gene="LOC133063584"
                     /coded_by="XM_061153137.1:425..1312"
                     /db_xref="GeneID:133063584"
ORIGIN      
        1 meliqdtsrp pakyvkgipl ikyfaealep lqsfeawpdd llistypksg ttwvseildl
       61 iyqdgdlekc qrapvfmrvp flefkvpgvp tgvelledtp aprllkthlp lallpktlld
      121 qnvkviyiar nakdvavsyy hfyrmakvhp dpgtwdsfle kfmagevcyg swyqhvreww
      181 elshthpvly lfyedikedp kreiqkilef lgrslpeetv dhiiqhtsfk emkknpmtny
      241 stipteimdh nisafmrkgi tgdwkstftv aqnerfeahy aekmagcklr frwel
//
LOCUS       XP_061009121             295 aa            linear   MAM 02-DEC-2023
DEFINITION  sulfotransferase 1A1 [Dama dama].
ACCESSION   XP_061009121
VERSION     XP_061009121.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153138.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..295
                     /product="sulfotransferase 1A1"
                     /calculated_mol_wt=34350
     Region          38..287
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; pfam00685"
                     /db_xref="CDD:425820"
     CDS             1..295
                     /gene="LOC133063584"
                     /coded_by="XM_061153138.1:465..1352"
                     /db_xref="GeneID:133063584"
ORIGIN      
        1 meliqdtsrp pakyvkgipl ikyfaealep lqsfeawpdd llistypksg ttwvseildl
       61 iyqdgdlekc qrapvfmrvp flefkvpgvp tgvelledtp aprllkthlp lallpktlld
      121 qnvkviyiar nakdvavsyy hfyrmakvhp dpgtwdsfle kfmagevcyg swyqhvreww
      181 elshthpvly lfyedikedp kreiqkilef lgrslpeetv dhiiqhtsfk emkknpmtny
      241 stipteimdh nisafmrkgi tgdwkstftv aqnerfeahy aekmagcklr frwel
//
LOCUS       XP_061009122             295 aa            linear   MAM 02-DEC-2023
DEFINITION  sulfotransferase 1A1 [Dama dama].
ACCESSION   XP_061009122
VERSION     XP_061009122.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153139.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..295
                     /product="sulfotransferase 1A1"
                     /calculated_mol_wt=34350
     Region          38..287
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; pfam00685"
                     /db_xref="CDD:425820"
     CDS             1..295
                     /gene="LOC133063584"
                     /coded_by="XM_061153139.1:341..1228"
                     /db_xref="GeneID:133063584"
ORIGIN      
        1 meliqdtsrp pakyvkgipl ikyfaealep lqsfeawpdd llistypksg ttwvseildl
       61 iyqdgdlekc qrapvfmrvp flefkvpgvp tgvelledtp aprllkthlp lallpktlld
      121 qnvkviyiar nakdvavsyy hfyrmakvhp dpgtwdsfle kfmagevcyg swyqhvreww
      181 elshthpvly lfyedikedp kreiqkilef lgrslpeetv dhiiqhtsfk emkknpmtny
      241 stipteimdh nisafmrkgi tgdwkstftv aqnerfeahy aekmagcklr frwel
//
LOCUS       XP_061009123             295 aa            linear   MAM 02-DEC-2023
DEFINITION  sulfotransferase 1A1 [Dama dama].
ACCESSION   XP_061009123
VERSION     XP_061009123.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153140.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..295
                     /product="sulfotransferase 1A1"
                     /calculated_mol_wt=34350
     Region          38..287
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; pfam00685"
                     /db_xref="CDD:425820"
     CDS             1..295
                     /gene="LOC133063584"
                     /coded_by="XM_061153140.1:461..1348"
                     /db_xref="GeneID:133063584"
ORIGIN      
        1 meliqdtsrp pakyvkgipl ikyfaealep lqsfeawpdd llistypksg ttwvseildl
       61 iyqdgdlekc qrapvfmrvp flefkvpgvp tgvelledtp aprllkthlp lallpktlld
      121 qnvkviyiar nakdvavsyy hfyrmakvhp dpgtwdsfle kfmagevcyg swyqhvreww
      181 elshthpvly lfyedikedp kreiqkilef lgrslpeetv dhiiqhtsfk emkknpmtny
      241 stipteimdh nisafmrkgi tgdwkstftv aqnerfeahy aekmagcklr frwel
//
LOCUS       XP_061009124             295 aa            linear   MAM 02-DEC-2023
DEFINITION  sulfotransferase 1A1 [Dama dama].
ACCESSION   XP_061009124
VERSION     XP_061009124.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153141.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..295
                     /product="sulfotransferase 1A1"
                     /calculated_mol_wt=34350
     Region          38..287
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; pfam00685"
                     /db_xref="CDD:425820"
     CDS             1..295
                     /gene="LOC133063584"
                     /coded_by="XM_061153141.1:317..1204"
                     /db_xref="GeneID:133063584"
ORIGIN      
        1 meliqdtsrp pakyvkgipl ikyfaealep lqsfeawpdd llistypksg ttwvseildl
       61 iyqdgdlekc qrapvfmrvp flefkvpgvp tgvelledtp aprllkthlp lallpktlld
      121 qnvkviyiar nakdvavsyy hfyrmakvhp dpgtwdsfle kfmagevcyg swyqhvreww
      181 elshthpvly lfyedikedp kreiqkilef lgrslpeetv dhiiqhtsfk emkknpmtny
      241 stipteimdh nisafmrkgi tgdwkstftv aqnerfeahy aekmagcklr frwel
//
LOCUS       XP_061009125             295 aa            linear   MAM 02-DEC-2023
DEFINITION  sulfotransferase 1A1 [Dama dama].
ACCESSION   XP_061009125
VERSION     XP_061009125.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153142.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..295
                     /product="sulfotransferase 1A1"
                     /calculated_mol_wt=34350
     Region          38..287
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; pfam00685"
                     /db_xref="CDD:425820"
     CDS             1..295
                     /gene="LOC133063584"
                     /coded_by="XM_061153142.1:421..1308"
                     /db_xref="GeneID:133063584"
ORIGIN      
        1 meliqdtsrp pakyvkgipl ikyfaealep lqsfeawpdd llistypksg ttwvseildl
       61 iyqdgdlekc qrapvfmrvp flefkvpgvp tgvelledtp aprllkthlp lallpktlld
      121 qnvkviyiar nakdvavsyy hfyrmakvhp dpgtwdsfle kfmagevcyg swyqhvreww
      181 elshthpvly lfyedikedp kreiqkilef lgrslpeetv dhiiqhtsfk emkknpmtny
      241 stipteimdh nisafmrkgi tgdwkstftv aqnerfeahy aekmagcklr frwel
//
LOCUS       XP_061009126             295 aa            linear   MAM 02-DEC-2023
DEFINITION  sulfotransferase 1A1 [Dama dama].
ACCESSION   XP_061009126
VERSION     XP_061009126.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153143.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..295
                     /product="sulfotransferase 1A1"
                     /calculated_mol_wt=34350
     Region          38..287
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; pfam00685"
                     /db_xref="CDD:425820"
     CDS             1..295
                     /gene="LOC133063584"
                     /coded_by="XM_061153143.1:216..1103"
                     /db_xref="GeneID:133063584"
ORIGIN      
        1 meliqdtsrp pakyvkgipl ikyfaealep lqsfeawpdd llistypksg ttwvseildl
       61 iyqdgdlekc qrapvfmrvp flefkvpgvp tgvelledtp aprllkthlp lallpktlld
      121 qnvkviyiar nakdvavsyy hfyrmakvhp dpgtwdsfle kfmagevcyg swyqhvreww
      181 elshthpvly lfyedikedp kreiqkilef lgrslpeetv dhiiqhtsfk emkknpmtny
      241 stipteimdh nisafmrkgi tgdwkstftv aqnerfeahy aekmagcklr frwel
//
LOCUS       XP_061009127             295 aa            linear   MAM 02-DEC-2023
DEFINITION  sulfotransferase 1A1 [Dama dama].
ACCESSION   XP_061009127
VERSION     XP_061009127.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153144.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..295
                     /product="sulfotransferase 1A1"
                     /calculated_mol_wt=34350
     Region          38..287
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; pfam00685"
                     /db_xref="CDD:425820"
     CDS             1..295
                     /gene="LOC133063584"
                     /coded_by="XM_061153144.1:176..1063"
                     /db_xref="GeneID:133063584"
ORIGIN      
        1 meliqdtsrp pakyvkgipl ikyfaealep lqsfeawpdd llistypksg ttwvseildl
       61 iyqdgdlekc qrapvfmrvp flefkvpgvp tgvelledtp aprllkthlp lallpktlld
      121 qnvkviyiar nakdvavsyy hfyrmakvhp dpgtwdsfle kfmagevcyg swyqhvreww
      181 elshthpvly lfyedikedp kreiqkilef lgrslpeetv dhiiqhtsfk emkknpmtny
      241 stipteimdh nisafmrkgi tgdwkstftv aqnerfeahy aekmagcklr frwel
//
LOCUS       XP_061009128             274 aa            linear   MAM 02-DEC-2023
DEFINITION  structure-specific endonuclease subunit SLX1 [Dama dama].
ACCESSION   XP_061009128
VERSION     XP_061009128.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153145.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..274
                     /product="structure-specific endonuclease subunit SLX1"
                     /calculated_mol_wt=30527
     Region          13..88
                     /region_name="GIY-YIG_SLX1"
                     /note="Catalytic GIY-YIG domain of yeast
                     structure-specific endonuclease subunit SLX1 and its
                     eukaryotic homologs; cd10455"
                     /db_xref="CDD:198402"
     Site            order(15..17,31..33)
                     /site_type="other"
                     /note="GIY-YIG motif/motif A"
                     /db_xref="CDD:198402"
     Site            order(17,31,33,41,45,82)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:198402"
     Site            82
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:198402"
     CDS             1..274
                     /gene="SLX1A"
                     /coded_by="XM_061153145.1:3..827"
                     /db_xref="GeneID:133063585"
ORIGIN      
        1 mgpaggaars grffgvylly clnprhrgrv yvgftvnpar rvqqhnggrk kggawrtsgr
       61 gpwemvlivh gfpsavaalr fewawqhpqa srrlthvgrr lrgeatfafh lrvlahmlra
      121 ppwarlpltl rwlrvdfrqd lcppppphmp lafgppppra palrsqagps ddtgcepeld
      181 vdarctlcar alqdeesplc cphpgcslra hviclaeefl qeepgqllpl egacpgckns
      241 llwgdliwlc rmgteedsed seleeehwtd mlet
//
LOCUS       XP_061009129             101 aa            linear   MAM 02-DEC-2023
DEFINITION  non-histone chromosomal protein HMG-14 [Dama dama].
ACCESSION   XP_061009129
VERSION     XP_061009129.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153146.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..101
                     /product="non-histone chromosomal protein HMG-14"
                     /calculated_mol_wt=10700
     Region          2..96
                     /region_name="HMG14_17"
                     /note="HMG14 and HMG17; pfam01101"
                     /db_xref="CDD:460064"
     CDS             1..101
                     /gene="LOC133063586"
                     /coded_by="XM_061153146.1:144..449"
                     /db_xref="GeneID:133063586"
ORIGIN      
        1 mpkrkvssae gaakeepkrr sarlsakpap akvetkpkka agkdkssdkk vqtkgkrgak
       61 gkqaevanqe tkedlpaeng etkneespas deaeekeaks d
//
LOCUS       XP_061009130              86 aa            linear   MAM 02-DEC-2023
DEFINITION  bolA-like protein 2 [Dama dama].
ACCESSION   XP_061009130
VERSION     XP_061009130.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153147.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..86
                     /product="bolA-like protein 2"
                     /calculated_mol_wt=9969
     Region          12..79
                     /region_name="BolA"
                     /note="BolA-like protein; pfam01722"
                     /db_xref="CDD:460305"
     CDS             1..86
                     /gene="BOLA2B"
                     /coded_by="XM_061153147.1:137..397"
                     /db_xref="GeneID:133063588"
ORIGIN      
        1 melsaeylre klqrdleaeh vevedttpnr cassfrvlvv sakfegkpll qrhrlvntcl
       61 aeellhihaf eqktltpeqw areqqk
//
LOCUS       XP_061009131             380 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase 3 [Dama dama].
ACCESSION   XP_061009131
VERSION     XP_061009131.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153148.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..380
                     /product="mitogen-activated protein kinase 3"
                     /calculated_mol_wt=42985
     Region          37..371
                     /region_name="STKc_ERK1_2_like"
                     /note="Catalytic domain of Extracellular signal-Regulated
                     Kinase 1 and 2-like Serine/Threonine Kinases; cd07849"
                     /db_xref="CDD:270839"
     Site            order(49..52,54..55,57,70,72,88,102,123..126,129,131..132,
                     167,169,171..172,174,184..185,188,203,205..208,210,248)
                     /site_type="active"
                     /db_xref="CDD:270839"
     Site            order(49..52,54..55,57,70,72,102,123..126,129,132,
                     171..172,174,184..185)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270839"
     Site            order(88,131,167,169,188,203,205..208,210,248)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270839"
     Site            order(99,127..128,132..133,136..137,142..143,146,149,153,
                     175..180,334,336,339)
                     /site_type="other"
                     /note="KIM docking site [polypeptide binding]"
                     /db_xref="CDD:270839"
     Site            184..210
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270839"
     CDS             1..380
                     /gene="MAPK3"
                     /coded_by="XM_061153148.1:16..1158"
                     /db_xref="GeneID:133063589"
ORIGIN      
        1 maaaaaaqgg gggeprgtdg vgpgvpgeve ivkgqpfdvg prytqlqyig egaygmvssa
       61 ydhvrktrva ikkispfehq tycqrtlrei qillrfrhen vigirdilra ptleamrdvy
      121 ivqdlmetdl ykllksqqls ndhvcyflyq ilrglkyihs anvlhrdlkp snllinttcd
      181 lkicdfglar iadpehdhtg flteyvatrw yrapeimlns kgytksidiw svgcilaeml
      241 snrpifpgkh yldqlnhilg ilgspsqedl nciinmkarn ylqslpsktk vawaklfpks
      301 dpkaldlldr mltfnpnkri tveealahpy leqyydptde pvaeepftfd melddlpker
      361 lkelifqeta rfqpgvleas
//
LOCUS       XP_061009132             318 aa            linear   MAM 02-DEC-2023
DEFINITION  lysophospholipase D GDPD3 isoform X1 [Dama dama].
ACCESSION   XP_061009132
VERSION     XP_061009132.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153149.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..318
                     /product="lysophospholipase D GDPD3 isoform X1"
                     /calculated_mol_wt=36505
     Region          13..310
                     /region_name="GDPD_GDE4"
                     /note="Glycerophosphodiester phosphodiesterase domain of
                     mammalian glycerophosphodiester phosphodiesterase GDE4 and
                     similar proteins; cd08612"
                     /db_xref="CDD:176553"
     Site            order(44,71,73,86,150,178,277)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176553"
     Site            order(44,86)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176553"
     Site            order(71,73,150)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:176553"
     CDS             1..318
                     /gene="GDPD3"
                     /coded_by="XM_061153149.1:634..1590"
                     /db_xref="GeneID:133063590"
ORIGIN      
        1 mspllyyalp algsyvmlsf fflrrprllh tpwvpafrpr lgahrggage rlentmeame
       61 namaqradll eldcqltrdg vvvvshdknl srqtgvnrdv dslnfedlpl lkeelevyfs
      121 pgrfargadr hmvrledlfr rfprtpmsve vkerneelih kiaglvrhyd rneitvwase
      181 kssimkkcka anpemptsft lsrgfwvllf yylgllpfis ipekflicfl ptiinrtyfp
      241 fsrsrlnqla avvakwlimr ksliqhlqqr gvqvvfwcln eesdfevafn lgatgvitdy
      301 ptllrcylds rgppalas
//
LOCUS       XP_061009134             256 aa            linear   MAM 02-DEC-2023
DEFINITION  lysophospholipase D GDPD3 isoform X2 [Dama dama].
ACCESSION   XP_061009134
VERSION     XP_061009134.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153151.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..256
                     /product="lysophospholipase D GDPD3 isoform X2"
                     /calculated_mol_wt=29444
     Region          1..248
                     /region_name="GDPD_GDE4"
                     /note="Glycerophosphodiester phosphodiesterase domain of
                     mammalian glycerophosphodiester phosphodiesterase GDE4 and
                     similar proteins; cd08612"
                     /db_xref="CDD:176553"
     Site            order(9,11,24,88,116,215)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176553"
     Site            order(9,11,88)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:176553"
     CDS             1..256
                     /gene="GDPD3"
                     /coded_by="XM_061153151.1:463..1233"
                     /db_xref="GeneID:133063590"
ORIGIN      
        1 maqradllel dcqltrdgvv vvshdknlsr qtgvnrdvds lnfedlpllk eelevyfspg
       61 rfargadrhm vrledlfrrf prtpmsvevk erneelihki aglvrhydrn eitvwaseks
      121 simkkckaan pemptsftls rgfwvllfyy lgllpfisip ekflicflpt iinrtyfpfs
      181 rsrlnqlaav vakwlimrks liqhlqqrgv qvvfwclnee sdfevafnlg atgvitdypt
      241 llrcyldsrg ppalas
//
LOCUS       XP_061009135             211 aa            linear   MAM 02-DEC-2023
DEFINITION  protein yippee-like 3 isoform X1 [Dama dama].
ACCESSION   XP_061009135
VERSION     XP_061009135.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153152.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..211
                     /product="protein yippee-like 3 isoform X1"
                     /calculated_mol_wt=22830
     Region          113..202
                     /region_name="RLR_C_like"
                     /note="C-terminal domain of Retinoic acid-inducible gene
                     (RIG)-I-like Receptors, Cereblon (CRBN), and similar
                     protein domains; cl13152"
                     /db_xref="CDD:472430"
     CDS             1..211
                     /gene="YPEL3"
                     /coded_by="XM_061153152.1:16..651"
                     /db_xref="GeneID:133063591"
ORIGIN      
        1 mlhadwsrrp pgtrgrpppp paaaaaaagl gvnksrrlrt raggdgahqe rpplpgqatp
       61 adrtparpge algslcspwa aprvgplppa pamvriskpk tfqaylddch rryscahcra
      121 hlanhddlis ksfqgsqgra ylfnsvvnvg cgpaeervll tglhavadih cenckttlgw
      181 kyeqafessq kykegkyiie lnhmikdngw d
//
LOCUS       XP_061009136             178 aa            linear   MAM 02-DEC-2023
DEFINITION  protein yippee-like 3 isoform X2 [Dama dama].
ACCESSION   XP_061009136
VERSION     XP_061009136.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153153.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..178
                     /product="protein yippee-like 3 isoform X2"
                     /calculated_mol_wt=19403
     Region          80..169
                     /region_name="RLR_C_like"
                     /note="C-terminal domain of Retinoic acid-inducible gene
                     (RIG)-I-like Receptors, Cereblon (CRBN), and similar
                     protein domains; cl13152"
                     /db_xref="CDD:472430"
     CDS             1..178
                     /gene="YPEL3"
                     /coded_by="XM_061153153.1:16..552"
                     /db_xref="GeneID:133063591"
ORIGIN      
        1 mlhadwsrrp pgtrgrpppp paaaaaaagl gvnksrrlrt raggdgahqe rpplpgqatp
       61 adrtparpge aylddchrry scahcrahla nhddlisksf qgsqgraylf nsvvnvgcgp
      121 aeervlltgl havadihcen ckttlgwkye qafessqkyk egkyiielnh mikdngwd
//
LOCUS       XP_061009137             307 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein phosphatase 4 catalytic subunit isoform X1
            [Dama dama].
ACCESSION   XP_061009137
VERSION     XP_061009137.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153154.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..307
                     /product="serine/threonine-protein phosphatase 4 catalytic
                     subunit isoform X1"
                     /calculated_mol_wt=34949
     Region          6..290
                     /region_name="MPP_PP2A_PP4_PP6"
                     /note="PP2A, PP4, and PP6 phosphoprotein phosphatases,
                     metallophosphatase domain; cd07415"
                     /db_xref="CDD:277360"
     Site            order(48,64,67..68,70..71,73,75..76,88,103..107,118..119,
                     122..123,127..128,131..132,140,265,274,284,290)
                     /site_type="other"
                     /note="heterotrimer interface [polypeptide binding]"
                     /db_xref="CDD:277360"
     Site            order(54,56,82,86,114..115,119..120,124,164,186..188,197,
                     210..212,238,240,264..266)
                     /site_type="active"
                     /db_xref="CDD:277360"
     Site            order(54,56,82,114,164,238)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277360"
     CDS             1..307
                     /gene="PPP4C"
                     /coded_by="XM_061153154.1:186..1109"
                     /db_xref="GeneID:133063592"
ORIGIN      
        1 maeisdldrq ieqlrrceli kesevkalca kareilvees nvqrvdspvt vcgdihgqfy
       61 dlkelfrvgg dvpetnylfm gdfvdrgfys vetfllllal kvrypdritl irgnhesrqi
      121 tqvygfydec lrkygsvtvw rycteifdyl slsaiidgki fcvhgglsps iqtldqirti
      181 drkqevphdg pmcdllwsdp edttgwgvsp rgagylfgsd vvaqfnaand idmicrahql
      241 vmegykwhfn etvltvwsap nycyrcgnva aileldehlq kdfiifeaap qetrgipskk
      301 pvadyfl
//
LOCUS       XP_061009138             294 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein phosphatase 4 catalytic subunit isoform X2
            [Dama dama].
ACCESSION   XP_061009138
VERSION     XP_061009138.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153155.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..294
                     /product="serine/threonine-protein phosphatase 4 catalytic
                     subunit isoform X2"
                     /calculated_mol_wt=33609
     Region          6..277
                     /region_name="MPP_PP2A_PP4_PP6"
                     /note="PP2A, PP4, and PP6 phosphoprotein phosphatases,
                     metallophosphatase domain; cd07415"
                     /db_xref="CDD:277360"
     Site            order(48,64,67..68,70..71,73,75..76,88,103..107,118..119,
                     122..123,127..128,131..132,140,252,261,271,277)
                     /site_type="other"
                     /note="heterotrimer interface [polypeptide binding]"
                     /db_xref="CDD:277360"
     Site            order(54,56,82,86,114..115,119..120,124,173..175,184,
                     197..199,225,227,251..253)
                     /site_type="active"
                     /db_xref="CDD:277360"
     Site            order(54,56,82,114,225)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277360"
     CDS             1..294
                     /gene="PPP4C"
                     /coded_by="XM_061153155.1:186..1070"
                     /db_xref="GeneID:133063592"
ORIGIN      
        1 maeisdldrq ieqlrrceli kesevkalca kareilvees nvqrvdspvt vcgdihgqfy
       61 dlkelfrvgg dvpetnylfm gdfvdrgfys vetfllllal kvrypdritl irgnhesrqi
      121 tqvygfydec lrkygsvtvw rycteifdyl slsaiidgkt ldqirtidrk qevphdgpmc
      181 dllwsdpedt tgwgvsprga gylfgsdvva qfnaandidm icrahqlvme gykwhfnetv
      241 ltvwsapnyc yrcgnvaail eldehlqkdf iifeaapqet rgipskkpva dyfl
//
LOCUS       XP_061009139             364 aa            linear   MAM 02-DEC-2023
DEFINITION  fructose-bisphosphate aldolase A [Dama dama].
ACCESSION   XP_061009139
VERSION     XP_061009139.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153156.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..364
                     /product="fructose-bisphosphate aldolase A"
                     /calculated_mol_wt=39305
     Region          15..364
                     /region_name="Glycolytic"
                     /note="Fructose-bisphosphate aldolase class-I; pfam00274"
                     /db_xref="CDD:459742"
     CDS             1..364
                     /gene="ALDOA"
                     /coded_by="XM_061153156.1:186..1280"
                     /db_xref="GeneID:133063593"
ORIGIN      
        1 mphqypaltp eqkkelcdia hrivapgkgi laadestgsi akrlqsigte nteenrrfyr
       61 qllltaddrv npciggvilf hetlyqkadd grpfpqvika kggvvgikvd kgvvplagtn
      121 getttqgldg lsercaqykk dgadfakwrc vlkigehtps slaimenanv laryasicqq
      181 ngivpivepe ilpdgdhdlk rcqyvtekvl aavykalsdh hiylegtllk pnmvtpghac
      241 tqkysheeia matvtalrrt vppavpgitf lsggqseeea sinlnainkc pllkpwaltf
      301 sygralqasa lkawggkken lkaaqeeyvk ralanslacq gkytpsgkag aaaseslfis
      361 nhay
//
LOCUS       XP_061009140             364 aa            linear   MAM 02-DEC-2023
DEFINITION  fructose-bisphosphate aldolase A [Dama dama].
ACCESSION   XP_061009140
VERSION     XP_061009140.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153157.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..364
                     /product="fructose-bisphosphate aldolase A"
                     /calculated_mol_wt=39305
     Region          15..364
                     /region_name="Glycolytic"
                     /note="Fructose-bisphosphate aldolase class-I; pfam00274"
                     /db_xref="CDD:459742"
     CDS             1..364
                     /gene="ALDOA"
                     /coded_by="XM_061153157.1:131..1225"
                     /db_xref="GeneID:133063593"
ORIGIN      
        1 mphqypaltp eqkkelcdia hrivapgkgi laadestgsi akrlqsigte nteenrrfyr
       61 qllltaddrv npciggvilf hetlyqkadd grpfpqvika kggvvgikvd kgvvplagtn
      121 getttqgldg lsercaqykk dgadfakwrc vlkigehtps slaimenanv laryasicqq
      181 ngivpivepe ilpdgdhdlk rcqyvtekvl aavykalsdh hiylegtllk pnmvtpghac
      241 tqkysheeia matvtalrrt vppavpgitf lsggqseeea sinlnainkc pllkpwaltf
      301 sygralqasa lkawggkken lkaaqeeyvk ralanslacq gkytpsgkag aaaseslfis
      361 nhay
//
LOCUS       XP_061009141             142 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133063594 isoform X1 [Dama dama].
ACCESSION   XP_061009141
VERSION     XP_061009141.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153158.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..142
                     /product="uncharacterized protein LOC133063594 isoform X1"
                     /calculated_mol_wt=15038
     CDS             1..142
                     /gene="LOC133063594"
                     /coded_by="XM_061153158.1:99..527"
                     /db_xref="GeneID:133063594"
ORIGIN      
        1 mdpssspwtp tpapvsgpsl llpipaivvl svgiyllllg lvlltrhcll aqgcctdcss
       61 pcrkqgasrp qdccqtcaea cdfplpspar yldaccpqpt eavssrpgsw plsphpgils
      121 afiffffrfn kiyygapilg qa
//
LOCUS       XP_061009143             139 aa            linear   MAM 02-DEC-2023
DEFINITION  keratin-associated protein 10-10 isoform X2 [Dama dama].
ACCESSION   XP_061009143
VERSION     XP_061009143.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153160.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..139
                     /product="keratin-associated protein 10-10 isoform X2"
                     /calculated_mol_wt=14742
     CDS             1..139
                     /gene="LOC133063594"
                     /coded_by="XM_061153160.1:99..518"
                     /db_xref="GeneID:133063594"
ORIGIN      
        1 mdpssspwtp tpapvsgpsl llpipaivvl svgiyllllg lvlltrhcll aqgcctdcss
       61 pcrkqgasrp qdccqtcaea cdfplpspar yldaccpqpt eadwaprcpr ccplcdcaca
      121 cqlpdcqsln clcfeiklr
//
LOCUS       XP_061009144            1236 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase TAO2 isoform X1 [Dama dama].
ACCESSION   XP_061009144
VERSION     XP_061009144.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153161.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1236
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1236
                     /product="serine/threonine-protein kinase TAO2 isoform X1"
                     /calculated_mol_wt=138395
     Region          12..319
                     /region_name="STKc_TAO2"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Thousand-and-One Amino acids 2; cd06634"
                     /db_xref="CDD:270804"
     Site            order(34..38,42,55,57,89,105..108,110..111,114,155..156,
                     158,169,314)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270804"
     Site            order(34..38,42,55,57,89,105..108,110..111,114,151,
                     153..156,158,168..169,172,182..185,187,217,226)
                     /site_type="active"
                     /db_xref="CDD:270804"
     Site            order(37..38,151,153..155,172,182..185,187,217,226)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270804"
     Site            168..187
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270804"
     Region          <467..>862
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..1236
                     /gene="TAOK2"
                     /coded_by="XM_061153161.1:778..4488"
                     /db_xref="GeneID:133063595"
ORIGIN      
        1 mpaggragsl kdpdvaelff kddpeklfsd lreighgsfg avyfardvrn sevvaikkms
       61 ysgkqsnekw qdiikevrfl qklrhpntiq yrgcylreht awlvmeyclg sasdllevhk
      121 kplqeveiaa vthgalqgla ylhshnmihr dvkagnills epglvklgdf gsasimapan
      181 sfvgtpywma pevilamdeg qydgkvdvws lgitcielae rkpplfnmna msalyhiaqn
      241 espvlqsghw seyfrnfvds clqkipqdrp tsevllkhrf vlrerpptvi mdliqrtkda
      301 vreldnlqyr kmkkilfqea pngpgaeape eeeeaepymh ragtltsles shsvpsmsis
      361 assqsssvns ladasdneee eeeeeeeeee eegpearema mmqegehtvt shssiihrlp
      421 gsdnlyddpy qpemtpgplq ppaapaptst tssarrrayc rnrdhfatir taslvsrqiq
      481 eheqdsalre qlsgykrmrr qhqkqllale srlrgereeh sarlqrelea qragfgaeae
      541 klsrrhqaig ekearaaqae erkfqqhilg qqkkelaall eaqkrtyklr keqlkeelqe
      601 npstpkreka ewllrqkeql qqcqaeeeag llrrqrqyfe lqcrqykrkm llarhsldqd
      661 llredlnkkq tqkdlecall lrqheatrel elrqlqavqr traeltrlqh qtelgnqley
      721 nkrreqelrq khaaqvrqqp kslkvragqr ppglplpvpg avgppntgal reeqpcspgq
      781 eavldqrmlg eeeeavperr ilgkegaale peeqrilgee sgtaspcpqn heslvdeevw
      841 glpeedteel rvpspapqer sivgqeasve wrlwgkedgs llgeefeldw vqgpaltpvp
      901 eeeeeeeega pfrtprdpgd gcpspdippe pppthlrpgt tsqlpgllsh gllaglsfav
      961 gsssgllpll lllllpllaa qgggglqaal lalevglvgl gasylllcta lhlppslfll
     1021 laqgtalgav lslswrrgll gvplglgaaw llawpglalp laalaaggkw vrqqgprmrr
     1081 gisrlwlral lrlspmvfra lqgcgavgdr glfalypktn kdgfrsripv pgprrgnprt
     1141 arhplallar fwalckgwnw rlarasqsla trlppwavht laswgllrge rpsriprllp
     1201 rsqrrmgspa shqpppgmlv grrprarqsr alppwr
//
LOCUS       XP_061009145            1236 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase TAO2 isoform X1 [Dama dama].
ACCESSION   XP_061009145
VERSION     XP_061009145.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153162.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1236
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1236
                     /product="serine/threonine-protein kinase TAO2 isoform X1"
                     /calculated_mol_wt=138395
     Region          12..319
                     /region_name="STKc_TAO2"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Thousand-and-One Amino acids 2; cd06634"
                     /db_xref="CDD:270804"
     Site            order(34..38,42,55,57,89,105..108,110..111,114,155..156,
                     158,169,314)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270804"
     Site            order(34..38,42,55,57,89,105..108,110..111,114,151,
                     153..156,158,168..169,172,182..185,187,217,226)
                     /site_type="active"
                     /db_xref="CDD:270804"
     Site            order(37..38,151,153..155,172,182..185,187,217,226)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270804"
     Site            168..187
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270804"
     Region          <467..>862
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..1236
                     /gene="TAOK2"
                     /coded_by="XM_061153162.1:116..3826"
                     /db_xref="GeneID:133063595"
ORIGIN      
        1 mpaggragsl kdpdvaelff kddpeklfsd lreighgsfg avyfardvrn sevvaikkms
       61 ysgkqsnekw qdiikevrfl qklrhpntiq yrgcylreht awlvmeyclg sasdllevhk
      121 kplqeveiaa vthgalqgla ylhshnmihr dvkagnills epglvklgdf gsasimapan
      181 sfvgtpywma pevilamdeg qydgkvdvws lgitcielae rkpplfnmna msalyhiaqn
      241 espvlqsghw seyfrnfvds clqkipqdrp tsevllkhrf vlrerpptvi mdliqrtkda
      301 vreldnlqyr kmkkilfqea pngpgaeape eeeeaepymh ragtltsles shsvpsmsis
      361 assqsssvns ladasdneee eeeeeeeeee eegpearema mmqegehtvt shssiihrlp
      421 gsdnlyddpy qpemtpgplq ppaapaptst tssarrrayc rnrdhfatir taslvsrqiq
      481 eheqdsalre qlsgykrmrr qhqkqllale srlrgereeh sarlqrelea qragfgaeae
      541 klsrrhqaig ekearaaqae erkfqqhilg qqkkelaall eaqkrtyklr keqlkeelqe
      601 npstpkreka ewllrqkeql qqcqaeeeag llrrqrqyfe lqcrqykrkm llarhsldqd
      661 llredlnkkq tqkdlecall lrqheatrel elrqlqavqr traeltrlqh qtelgnqley
      721 nkrreqelrq khaaqvrqqp kslkvragqr ppglplpvpg avgppntgal reeqpcspgq
      781 eavldqrmlg eeeeavperr ilgkegaale peeqrilgee sgtaspcpqn heslvdeevw
      841 glpeedteel rvpspapqer sivgqeasve wrlwgkedgs llgeefeldw vqgpaltpvp
      901 eeeeeeeega pfrtprdpgd gcpspdippe pppthlrpgt tsqlpgllsh gllaglsfav
      961 gsssgllpll lllllpllaa qgggglqaal lalevglvgl gasylllcta lhlppslfll
     1021 laqgtalgav lslswrrgll gvplglgaaw llawpglalp laalaaggkw vrqqgprmrr
     1081 gisrlwlral lrlspmvfra lqgcgavgdr glfalypktn kdgfrsripv pgprrgnprt
     1141 arhplallar fwalckgwnw rlarasqsla trlppwavht laswgllrge rpsriprllp
     1201 rsqrrmgspa shqpppgmlv grrprarqsr alppwr
//
LOCUS       XP_061009146            1049 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase TAO2 isoform X2 [Dama dama].
ACCESSION   XP_061009146
VERSION     XP_061009146.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153163.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1049
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1049
                     /product="serine/threonine-protein kinase TAO2 isoform X2"
                     /calculated_mol_wt=119083
     Region          12..319
                     /region_name="STKc_TAO2"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Thousand-and-One Amino acids 2; cd06634"
                     /db_xref="CDD:270804"
     Site            order(34..38,42,55,57,89,105..108,110..111,114,155..156,
                     158,169,314)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270804"
     Site            order(34..38,42,55,57,89,105..108,110..111,114,151,
                     153..156,158,168..169,172,182..185,187,217,226)
                     /site_type="active"
                     /db_xref="CDD:270804"
     Site            order(37..38,151,153..155,172,182..185,187,217,226)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270804"
     Site            168..187
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270804"
     Region          <467..>922
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..1049
                     /gene="TAOK2"
                     /coded_by="XM_061153163.1:778..3927"
                     /db_xref="GeneID:133063595"
ORIGIN      
        1 mpaggragsl kdpdvaelff kddpeklfsd lreighgsfg avyfardvrn sevvaikkms
       61 ysgkqsnekw qdiikevrfl qklrhpntiq yrgcylreht awlvmeyclg sasdllevhk
      121 kplqeveiaa vthgalqgla ylhshnmihr dvkagnills epglvklgdf gsasimapan
      181 sfvgtpywma pevilamdeg qydgkvdvws lgitcielae rkpplfnmna msalyhiaqn
      241 espvlqsghw seyfrnfvds clqkipqdrp tsevllkhrf vlrerpptvi mdliqrtkda
      301 vreldnlqyr kmkkilfqea pngpgaeape eeeeaepymh ragtltsles shsvpsmsis
      361 assqsssvns ladasdneee eeeeeeeeee eegpearema mmqegehtvt shssiihrlp
      421 gsdnlyddpy qpemtpgplq ppaapaptst tssarrrayc rnrdhfatir taslvsrqiq
      481 eheqdsalre qlsgykrmrr qhqkqllale srlrgereeh sarlqrelea qragfgaeae
      541 klsrrhqaig ekearaaqae erkfqqhilg qqkkelaall eaqkrtyklr keqlkeelqe
      601 npstpkreka ewllrqkeql qqcqaeeeag llrrqrqyfe lqcrqykrkm llarhsldqd
      661 llredlnkkq tqkdlecall lrqheatrel elrqlqavqr traeltrlqh qtelgnqley
      721 nkrreqelrq khaaqvrqqp kslkskelqi kkqfqetcki qtrqykalra hllettpkaq
      781 hksllkrlke eqtrklaila eqydqsisem lssqalrlde tqeaefqalr qqlqqelell
      841 nayqskikir tesqherelr eleqrvalrr alleqrveee llalqtgrse rirsllerqa
      901 reieafdaes mrlgfssmal ggipaeaaaq gypapppapa wpsrpvprsg ahwshgpppl
      961 gmpppawrqp allappgppn wlgppaqsgt prggallllr nspqplrraa sggsgsdsvg
     1021 ppaaavpgpl srstsvashi lngsshfys
//
LOCUS       XP_061009147             978 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase TAO2 isoform X3 [Dama dama].
ACCESSION   XP_061009147
VERSION     XP_061009147.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153164.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..978
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..978
                     /product="serine/threonine-protein kinase TAO2 isoform X3"
                     /calculated_mol_wt=110758
     Region          12..319
                     /region_name="STKc_TAO2"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Thousand-and-One Amino acids 2; cd06634"
                     /db_xref="CDD:270804"
     Site            order(34..38,42,55,57,89,105..108,110..111,114,155..156,
                     158,169,314)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270804"
     Site            order(34..38,42,55,57,89,105..108,110..111,114,151,
                     153..156,158,168..169,172,182..185,187,217,226)
                     /site_type="active"
                     /db_xref="CDD:270804"
     Site            order(37..38,151,153..155,172,182..185,187,217,226)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270804"
     Site            168..187
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270804"
     Region          <467..>838
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..978
                     /gene="TAOK2"
                     /coded_by="XM_061153164.1:778..3714"
                     /db_xref="GeneID:133063595"
ORIGIN      
        1 mpaggragsl kdpdvaelff kddpeklfsd lreighgsfg avyfardvrn sevvaikkms
       61 ysgkqsnekw qdiikevrfl qklrhpntiq yrgcylreht awlvmeyclg sasdllevhk
      121 kplqeveiaa vthgalqgla ylhshnmihr dvkagnills epglvklgdf gsasimapan
      181 sfvgtpywma pevilamdeg qydgkvdvws lgitcielae rkpplfnmna msalyhiaqn
      241 espvlqsghw seyfrnfvds clqkipqdrp tsevllkhrf vlrerpptvi mdliqrtkda
      301 vreldnlqyr kmkkilfqea pngpgaeape eeeeaepymh ragtltsles shsvpsmsis
      361 assqsssvns ladasdneee eeeeeeeeee eegpearema mmqegehtvt shssiihrlp
      421 gsdnlyddpy qpemtpgplq ppaapaptst tssarrrayc rnrdhfatir taslvsrqiq
      481 eheqdsalre qlsgykrmrr qhqkqllale srlrgereeh sarlqrelea qragfgaeae
      541 klsrrhqaig ekearaaqae erkfqqhilg qqkkelaall eaqkrtyklr keqlkeelqe
      601 npstpkreka ewllrqkeql qqcqaeeeag llrrqrqyfe lqcrqykrkm llarhsldqd
      661 llredlnkkq tqkdlecall lrqheatrel elrqlqavqr traeltrlqh qtelgnqley
      721 nkrreqelrq khaaqvrqqp kslklrldet qeaefqalrq qlqqelelln ayqskikirt
      781 esqherelre leqrvalrra lleqrveeel lalqtgrser irsllerqar eieafdaesm
      841 rlgfssmalg gipaeaaaqg ypapppapaw psrpvprsga hwshgppplg mpppawrqpa
      901 llappgppnw lgppaqsgtp rggallllrn spqplrraas ggsgsdsvgp paaavpgpls
      961 rstsvashil ngsshfys
//
LOCUS       XP_061009148             845 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase TAO2 isoform X4 [Dama dama].
ACCESSION   XP_061009148
VERSION     XP_061009148.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153165.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..845
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..845
                     /product="serine/threonine-protein kinase TAO2 isoform X4"
                     /calculated_mol_wt=97224
     Region          12..319
                     /region_name="STKc_TAO2"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Thousand-and-One Amino acids 2; cd06634"
                     /db_xref="CDD:270804"
     Site            order(34..38,42,55,57,89,105..108,110..111,114,155..156,
                     158,169,314)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270804"
     Site            order(34..38,42,55,57,89,105..108,110..111,114,151,
                     153..156,158,168..169,172,182..185,187,217,226)
                     /site_type="active"
                     /db_xref="CDD:270804"
     Site            order(37..38,151,153..155,172,182..185,187,217,226)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270804"
     Site            168..187
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270804"
     Region          <467..>753
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..845
                     /gene="TAOK2"
                     /coded_by="XM_061153165.1:778..3315"
                     /db_xref="GeneID:133063595"
ORIGIN      
        1 mpaggragsl kdpdvaelff kddpeklfsd lreighgsfg avyfardvrn sevvaikkms
       61 ysgkqsnekw qdiikevrfl qklrhpntiq yrgcylreht awlvmeyclg sasdllevhk
      121 kplqeveiaa vthgalqgla ylhshnmihr dvkagnills epglvklgdf gsasimapan
      181 sfvgtpywma pevilamdeg qydgkvdvws lgitcielae rkpplfnmna msalyhiaqn
      241 espvlqsghw seyfrnfvds clqkipqdrp tsevllkhrf vlrerpptvi mdliqrtkda
      301 vreldnlqyr kmkkilfqea pngpgaeape eeeeaepymh ragtltsles shsvpsmsis
      361 assqsssvns ladasdneee eeeeeeeeee eegpearema mmqegehtvt shssiihrlp
      421 gsdnlyddpy qpemtpgplq ppaapaptst tssarrrayc rnrdhfatir taslvsrqiq
      481 eheqdsalre qlsgykrmrr qhqkqllale srlrgereeh sarlqrelea qragfgaeae
      541 klsrrhqaig ekearaaqae erkfqqhilg qqkkelaall eaqkrtyklr keqlkeelqe
      601 npstpkreka ewllrqkeql qqcqaeeeag llrrqrqyfe lqcrqykrkm llarhsldqd
      661 llredlnkkq tqkdlecall lrqheatrel elrqlqavqr traeltrlqh qtelgnqley
      721 nkrreqelrq khaaqvrqqp kslkskelqi kkqfqetcki qtrqykalra hllettpkaq
      781 hksllkrlke eqtrklaila eqydqsisem lssqavvssi lllqrfsehl rahvqvyvgd
      841 kflev
//
LOCUS       XP_061009149             845 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase TAO2 isoform X4 [Dama dama].
ACCESSION   XP_061009149
VERSION     XP_061009149.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153166.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..845
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..845
                     /product="serine/threonine-protein kinase TAO2 isoform X4"
                     /calculated_mol_wt=97224
     Region          12..319
                     /region_name="STKc_TAO2"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Thousand-and-One Amino acids 2; cd06634"
                     /db_xref="CDD:270804"
     Site            order(34..38,42,55,57,89,105..108,110..111,114,155..156,
                     158,169,314)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270804"
     Site            order(34..38,42,55,57,89,105..108,110..111,114,151,
                     153..156,158,168..169,172,182..185,187,217,226)
                     /site_type="active"
                     /db_xref="CDD:270804"
     Site            order(37..38,151,153..155,172,182..185,187,217,226)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270804"
     Site            168..187
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270804"
     Region          <467..>753
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..845
                     /gene="TAOK2"
                     /coded_by="XM_061153166.1:778..3315"
                     /db_xref="GeneID:133063595"
ORIGIN      
        1 mpaggragsl kdpdvaelff kddpeklfsd lreighgsfg avyfardvrn sevvaikkms
       61 ysgkqsnekw qdiikevrfl qklrhpntiq yrgcylreht awlvmeyclg sasdllevhk
      121 kplqeveiaa vthgalqgla ylhshnmihr dvkagnills epglvklgdf gsasimapan
      181 sfvgtpywma pevilamdeg qydgkvdvws lgitcielae rkpplfnmna msalyhiaqn
      241 espvlqsghw seyfrnfvds clqkipqdrp tsevllkhrf vlrerpptvi mdliqrtkda
      301 vreldnlqyr kmkkilfqea pngpgaeape eeeeaepymh ragtltsles shsvpsmsis
      361 assqsssvns ladasdneee eeeeeeeeee eegpearema mmqegehtvt shssiihrlp
      421 gsdnlyddpy qpemtpgplq ppaapaptst tssarrrayc rnrdhfatir taslvsrqiq
      481 eheqdsalre qlsgykrmrr qhqkqllale srlrgereeh sarlqrelea qragfgaeae
      541 klsrrhqaig ekearaaqae erkfqqhilg qqkkelaall eaqkrtyklr keqlkeelqe
      601 npstpkreka ewllrqkeql qqcqaeeeag llrrqrqyfe lqcrqykrkm llarhsldqd
      661 llredlnkkq tqkdlecall lrqheatrel elrqlqavqr traeltrlqh qtelgnqley
      721 nkrreqelrq khaaqvrqqp kslkskelqi kkqfqetcki qtrqykalra hllettpkaq
      781 hksllkrlke eqtrklaila eqydqsisem lssqavvssi lllqrfsehl rahvqvyvgd
      841 kflev
//
LOCUS       XP_061009150             572 aa            linear   MAM 02-DEC-2023
DEFINITION  HIRA-interacting protein 3 [Dama dama].
ACCESSION   XP_061009150
VERSION     XP_061009150.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153167.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..572
                     /product="HIRA-interacting protein 3"
                     /calculated_mol_wt=63804
     Region          500..536
                     /region_name="CHZ"
                     /note="Histone chaperone domain CHZ; smart01082"
                     /db_xref="CDD:198150"
     CDS             1..572
                     /gene="HIRIP3"
                     /coded_by="XM_061153167.1:60..1778"
                     /db_xref="GeneID:133063596"
ORIGIN      
        1 marenemqef trsffqghpd lstlthsivr rrflahagrd hlepeekqal krlveeellk
       61 mqvdeasake erlhvgkkak rsptscrdpe rkrfrfnses epssaasspd clnpsakngm
      121 vayvtptede spnqtskkat essdeeqqrd ltakirleke vvkesseeee egsarkrkvw
      181 keesseeeee keskgrtrkk pgtntkqapg kasgsrkqar eesedseeep aqgpgkkpeg
      241 kkgakshqes dkeseeeetl tkkkenreek edwkataqss ggkrsvreer sckqkrraar
      301 llgdrgdree qmekaaassg dsseedeell vhrqrkdrtq geggkrqsgs sedgedsprk
      361 vkpttgktak egsisgeasd sekevsnsea easpkerknr sskmsskkgr trspsssstd
      421 gsperkggka gsdrsgedhp avrrlkryir acgahrnykk llgscrsrke rlsvlraele
      481 algmkgnpsl ekcralkeqr eeaaevasld itniisssgr prrrtawnps geaappgely
      541 rrtldsdeer prppppdwsh lrgiissdge sn
//
LOCUS       XP_061009152             401 aa            linear   MAM 02-DEC-2023
DEFINITION  double C2-like domain-containing protein alpha [Dama dama].
ACCESSION   XP_061009152
VERSION     XP_061009152.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153169.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..401
                     /product="double C2-like domain-containing protein alpha"
                     /calculated_mol_wt=44069
     Region          91..214
                     /region_name="C2A_Rabphilin_Doc2"
                     /note="C2 domain first repeat present in Rabphilin and
                     Double C2 domain; cd04035"
                     /db_xref="CDD:176000"
     Site            order(121,127,182,184,190)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176000"
     Region          255..387
                     /region_name="C2B_Rabphilin_Doc2"
                     /note="C2 domain second repeat present in Rabphilin and
                     Double C2 domain; cd08384"
                     /db_xref="CDD:176030"
     Site            order(283,289,343,345,351)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176030"
     CDS             1..401
                     /gene="DOC2A"
                     /coded_by="XM_061153169.1:221..1426"
                     /db_xref="GeneID:133063597"
ORIGIN      
        1 mrgrrgdrma iniqehmain vcpgpirpir qisdyfprrg pgfegggggf geapahlapl
       61 alappaallg attpeegaev dsydsddtta lgtlefdlly dqasctlhcs ilrakglkpm
      121 dfngladpyv klhllpgack anklktktqr ntlnpvwned ltysgitvdd ithkvlrisv
      181 cdedklshne figeirvplr rlkpsqkkhf niclerqvpl aspssmsaal rgiscylkel
      241 eqaeqgpgll eergrillsl syssrrrgll vgivrcahla amdvngysdp yvktylrpdv
      301 dkkskhktcv kkktlnpefn eeffydmels tlatktlevt vwdydigksn dfiggvslgs
      361 gargearrhw sdclqqpdaa lerwhtltsq lppaagalps a
//
LOCUS       XP_061009153             247 aa            linear   MAM 02-DEC-2023
DEFINITION  INO80 complex subunit E isoform X1 [Dama dama].
ACCESSION   XP_061009153
VERSION     XP_061009153.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153170.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..247
                     /product="INO80 complex subunit E isoform X1"
                     /calculated_mol_wt=26587
     CDS             1..247
                     /gene="INO80E"
                     /coded_by="XM_061153170.1:124..867"
                     /db_xref="GeneID:133063598"
ORIGIN      
        1 mngpadgevd ykkkyrnlkr klkfliyehe cfqeelrkaq rkllkvsrdk sflldrllqy
       61 envdedssge qdsdatassd nsetegtpkl sdtpapkrkr spplggtpsp sslslppstg
      121 fplqasraps pylsslaspt yppfpsdyla lqlpepsplr pkrekrprlp rklkmavgpp
      181 dcpvggpltf sgrgsgagvg aalaplpppk mppptilsav prqmfsdags gddaldgddd
      241 lvidipe
//
LOCUS       XP_061009154             244 aa            linear   MAM 02-DEC-2023
DEFINITION  INO80 complex subunit E isoform X2 [Dama dama].
ACCESSION   XP_061009154
VERSION     XP_061009154.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153171.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..244
                     /product="INO80 complex subunit E isoform X2"
                     /calculated_mol_wt=26273
     CDS             1..244
                     /gene="INO80E"
                     /coded_by="XM_061153171.1:124..858"
                     /db_xref="GeneID:133063598"
ORIGIN      
        1 mngpadgevd ykkkyrnlkr klkfliyehe cfqeelrkaq rkllkvsrdk sflldrllqy
       61 envdedssds datassdnse tegtpklsdt papkrkrspp lggtpspssl slppstgfpl
      121 qasrapspyl sslasptypp fpsdylalql pepsplrpkr ekrprlprkl kmavgppdcp
      181 vggpltfsgr gsgagvgaal aplpppkmpp ptilsavprq mfsdagsgdd aldgdddlvi
      241 dipe
//
LOCUS       XP_061009155             208 aa            linear   MAM 02-DEC-2023
DEFINITION  INO80 complex subunit E isoform X3 [Dama dama].
ACCESSION   XP_061009155
VERSION     XP_061009155.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153172.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..208
                     /product="INO80 complex subunit E isoform X3"
                     /calculated_mol_wt=22051
     CDS             1..208
                     /gene="INO80E"
                     /coded_by="XM_061153172.1:124..750"
                     /db_xref="GeneID:133063598"
ORIGIN      
        1 mngpadgevd ykkkyrnlkr klkfliyehe cfqeelrkaq rkllkvsrdk sflldrllqy
       61 envdedssge qdsdatassd nsetegtpkl sdtpapkrkr spplggtpsp sslslppstg
      121 fplqasraps pylssmavgp pdcpvggplt fsgrgsgagv gaalaplppp kmppptilsa
      181 vprqmfsdag sgddaldgdd dlvidipe
//
LOCUS       XP_061009156             205 aa            linear   MAM 02-DEC-2023
DEFINITION  INO80 complex subunit E isoform X4 [Dama dama].
ACCESSION   XP_061009156
VERSION     XP_061009156.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153173.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..205
                     /product="INO80 complex subunit E isoform X4"
                     /calculated_mol_wt=21736
     CDS             1..205
                     /gene="INO80E"
                     /coded_by="XM_061153173.1:124..741"
                     /db_xref="GeneID:133063598"
ORIGIN      
        1 mngpadgevd ykkkyrnlkr klkfliyehe cfqeelrkaq rkllkvsrdk sflldrllqy
       61 envdedssds datassdnse tegtpklsdt papkrkrspp lggtpspssl slppstgfpl
      121 qasrapspyl ssmavgppdc pvggpltfsg rgsgagvgaa laplpppkmp pptilsavpr
      181 qmfsdagsgd daldgdddlv idipe
//
LOCUS       XP_061009157             198 aa            linear   MAM 02-DEC-2023
DEFINITION  INO80 complex subunit E isoform X5 [Dama dama].
ACCESSION   XP_061009157
VERSION     XP_061009157.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153174.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..198
                     /product="INO80 complex subunit E isoform X5"
                     /calculated_mol_wt=21917
     CDS             1..198
                     /gene="INO80E"
                     /coded_by="XM_061153174.1:124..720"
                     /db_xref="GeneID:133063598"
ORIGIN      
        1 mngpadgevd ykkkyrnlkr klkfliyehe cfqeelrkaq rkllkvsrdk sflldrllqy
       61 envdedssge qdsdatassd nsetegtpkl sdtpapkrkr spplggtpsp sslslppstg
      121 fplqasraps pylsslaspt yppfpsdyla lqlpepsplr pkrekrprlp rklkmfsdag
      181 sgddaldgdd dlvidipe
//
LOCUS       XP_061009158             197 aa            linear   MAM 02-DEC-2023
DEFINITION  INO80 complex subunit E isoform X6 [Dama dama].
ACCESSION   XP_061009158
VERSION     XP_061009158.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153175.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..197
                     /product="INO80 complex subunit E isoform X6"
                     /calculated_mol_wt=21840
     CDS             1..197
                     /gene="INO80E"
                     /coded_by="XM_061153175.1:124..717"
                     /db_xref="GeneID:133063598"
ORIGIN      
        1 mngpadgevd ykkkyrnlkr klkfliyehe cfqeelrkaq rkllkvsrdk sflldrllqy
       61 envdedssge qdsdatassd nsetegtpkl sdtpapkrkr spplggtpsp sslslppstg
      121 fplqasraps pylsslaspt yppfpsdyla lqlpepsplr pkrekrprlp rklkrahsgc
      181 saeeeldlge aegrdss
//
LOCUS       XP_061009159             194 aa            linear   MAM 02-DEC-2023
DEFINITION  INO80 complex subunit E isoform X7 [Dama dama].
ACCESSION   XP_061009159
VERSION     XP_061009159.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153176.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..194
                     /product="INO80 complex subunit E isoform X7"
                     /calculated_mol_wt=21525
     CDS             1..194
                     /gene="INO80E"
                     /coded_by="XM_061153176.1:124..708"
                     /db_xref="GeneID:133063598"
ORIGIN      
        1 mngpadgevd ykkkyrnlkr klkfliyehe cfqeelrkaq rkllkvsrdk sflldrllqy
       61 envdedssds datassdnse tegtpklsdt papkrkrspp lggtpspssl slppstgfpl
      121 qasrapspyl sslasptypp fpsdylalql pepsplrpkr ekrprlprkl krahsgcsae
      181 eeldlgeaeg rdss
//
LOCUS       XP_061009160             177 aa            linear   MAM 02-DEC-2023
DEFINITION  INO80 complex subunit E isoform X8 [Dama dama].
ACCESSION   XP_061009160
VERSION     XP_061009160.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153177.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..177
                     /product="INO80 complex subunit E isoform X8"
                     /calculated_mol_wt=19374
     CDS             1..177
                     /gene="INO80E"
                     /coded_by="XM_061153177.1:124..657"
                     /db_xref="GeneID:133063598"
ORIGIN      
        1 mngpadgevd ykkkyrnlkr klkfliyehe cfqeelrkaq rkllkvsrdk sflldrllqy
       61 envdedssge qdsdatassd nsetegtpkl sdtpapkrvs psglegplpi peldgggtpr
      121 lpcgraadll rpglwgwggg slgpptptqd appydpecrs sadvqrrgqr grrpgrg
//
LOCUS       XP_061009161             174 aa            linear   MAM 02-DEC-2023
DEFINITION  INO80 complex subunit E isoform X9 [Dama dama].
ACCESSION   XP_061009161
VERSION     XP_061009161.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153178.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..174
                     /product="INO80 complex subunit E isoform X9"
                     /calculated_mol_wt=19059
     CDS             1..174
                     /gene="INO80E"
                     /coded_by="XM_061153178.1:124..648"
                     /db_xref="GeneID:133063598"
ORIGIN      
        1 mngpadgevd ykkkyrnlkr klkfliyehe cfqeelrkaq rkllkvsrdk sflldrllqy
       61 envdedssds datassdnse tegtpklsdt papkrvspsg legplpipel dgggtprlpc
      121 graadllrpg lwgwgggslg pptptqdapp ydpecrssad vqrrgqrgrr pgrg
//
LOCUS       XP_061009163             271 aa            linear   MAM 02-DEC-2023
DEFINITION  insulin-like growth factor-binding protein 3 receptor isoform X1
            [Dama dama].
ACCESSION   XP_061009163
VERSION     XP_061009163.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153180.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..271
                     /product="insulin-like growth factor-binding protein 3
                     receptor isoform X1"
                     /calculated_mol_wt=28989
     Region          78..201
                     /region_name="TMEM219"
                     /note="Transmembrane 219; pfam14940"
                     /db_xref="CDD:464388"
     CDS             1..271
                     /gene="TMEM219"
                     /coded_by="XM_061153180.1:310..1125"
                     /db_xref="GeneID:133063599"
ORIGIN      
        1 mgkclltgrl lssspflsss rlfpeaqtpl lpmgscqagh ylhlclahnp plvcatlill
       61 llglsglglg gfllthrtdl rspdipqdwv sflrsfgqlt lcpvngtvtg kgrgshvvgl
      121 lttlnfgdgp drnktqtfqa qvqgsrmglk gsfagelvlv tarvttertp giclyfsaap
      181 qilpssqppi pcseegagna tlsprmaeec vsvwsheglv ltklltseel tlcgsrllvl
      241 gfflilfcgl ccltaacfhp rreshwsrtr l
//
LOCUS       XP_061009164             239 aa            linear   MAM 02-DEC-2023
DEFINITION  insulin-like growth factor-binding protein 3 receptor isoform X2
            [Dama dama].
ACCESSION   XP_061009164
VERSION     XP_061009164.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153181.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..239
                     /product="insulin-like growth factor-binding protein 3
                     receptor isoform X2"
                     /calculated_mol_wt=25559
     Region          46..169
                     /region_name="TMEM219"
                     /note="Transmembrane 219; pfam14940"
                     /db_xref="CDD:464388"
     CDS             1..239
                     /gene="TMEM219"
                     /coded_by="XM_061153181.1:171..890"
                     /db_xref="GeneID:133063599"
ORIGIN      
        1 mgscqaghyl hlclahnppl vcatlillll glsglglggf llthrtdlrs pdipqdwvsf
       61 lrsfgqltlc pvngtvtgkg rgshvvgllt tlnfgdgpdr nktqtfqaqv qgsrmglkgs
      121 fagelvlvta rvttertpgi clyfsaapqi lpssqppipc seegagnatl sprmaeecvs
      181 vwsheglvlt klltseeltl cgsrllvlgf flilfcglcc ltaacfhprr eshwsrtrl
//
LOCUS       XP_061009165             239 aa            linear   MAM 02-DEC-2023
DEFINITION  insulin-like growth factor-binding protein 3 receptor isoform X2
            [Dama dama].
ACCESSION   XP_061009165
VERSION     XP_061009165.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153182.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..239
                     /product="insulin-like growth factor-binding protein 3
                     receptor isoform X2"
                     /calculated_mol_wt=25559
     Region          46..169
                     /region_name="TMEM219"
                     /note="Transmembrane 219; pfam14940"
                     /db_xref="CDD:464388"
     CDS             1..239
                     /gene="TMEM219"
                     /coded_by="XM_061153182.1:174..893"
                     /db_xref="GeneID:133063599"
ORIGIN      
        1 mgscqaghyl hlclahnppl vcatlillll glsglglggf llthrtdlrs pdipqdwvsf
       61 lrsfgqltlc pvngtvtgkg rgshvvgllt tlnfgdgpdr nktqtfqaqv qgsrmglkgs
      121 fagelvlvta rvttertpgi clyfsaapqi lpssqppipc seegagnatl sprmaeecvs
      181 vwsheglvlt klltseeltl cgsrllvlgf flilfcglcc ltaacfhprr eshwsrtrl
//
LOCUS       XP_061009166             329 aa            linear   MAM 02-DEC-2023
DEFINITION  BTB/POZ domain-containing adapter for CUL3-mediated RhoA
            degradation protein 1 [Dama dama].
ACCESSION   XP_061009166
VERSION     XP_061009166.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153183.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..329
                     /product="BTB/POZ domain-containing adapter for
                     CUL3-mediated RhoA degradation protein 1"
                     /calculated_mol_wt=36246
     Region          40..142
                     /region_name="BTB_POZ_KCTD13_BACURD1"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in potassium
                     channel tetramerization domain-containing protein 13
                     (KCTD13); cd18400"
                     /db_xref="CDD:349708"
     Site            order(41..42,46,48..55,58,79,81,83,85,89..92,95,98,
                     101..102,106..109,117)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:349708"
     CDS             1..329
                     /gene="KCTD13"
                     /coded_by="XM_061153183.1:175..1164"
                     /db_xref="GeneID:133063602"
ORIGIN      
        1 msaeasgpaa aeapslevak psglepgsva yglkplttns kyvklnvggs lhyttlrtlt
       61 gqdsrlkamf sgraevltda ggwvlidrsg rhfgtilnyl rdgsvplpes trelgellge
      121 aryylvqgli edcqlalqqk renvsplcli ptvtspreeq qllastskpv vkllhnrsnn
      181 kysytstsdd nllknielfd klalrfhgrl lflkdvlgde iccwsfygqg rkiaevccts
      241 ivyatekkqt kvefpearif eetlniliye tprgpdpall eatggaaggg gagrgedeen
      301 rehrvrrihv rrhithderp hgqqivfkd
//
LOCUS       XP_061009167             445 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 13-like [Dama
            dama].
ACCESSION   XP_061009167
VERSION     XP_061009167.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153184.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..445
                     /product="LOW QUALITY PROTEIN: DDB1- and CUL4-associated
                     factor 13-like"
                     /calculated_mol_wt=51023
     Region          59..353
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(65,84,88,94..95,107..108,126,130,136..137,155,172,
                     177,183..184,212,218,224..225,236..237,255,260,266..267,
                     280..281,298,303,309..310,321,342,346,352..353)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          70..107
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          112..154
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          162..197
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          199..236
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          244..278
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          285..309
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          328..364
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          354..440
                     /region_name="Sof1"
                     /note="Sof1-like domain; pfam04158"
                     /db_xref="CDD:427753"
     CDS             1..445
                     /gene="LOC133063603"
                     /coded_by="XM_061153184.1:72..1409"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /db_xref="GeneID:133063603"
ORIGIN      
        1 mkvkmlsrnp dhyvretkld lhrvprnydp tlhpfevpre yiralnatkl ervfakpfla
       61 sldghrdgvn claknpksla tvlsgacdge vkiwnltrrk cirtiqaheg fvrgictrfc
      121 gtsfftvgdd ktvkqwkmdg pscgeeeepl htilgktvyt gidhhwkeav fatcgqqvdi
      181 wdeqrtnpic smtwgfdsis svkfnpietf llgscasdrn ivlydmrqat plkkvildmr
      241 tnticwnpme afiftaaned ynlytfdmra ldtpvmvhmd hvsavldvdy sptgrefvsa
      301 sfdksixifp vdksrsrevy htkrmqhvic vkwtadskci mcgsdemnis lwkanasekl
      361 gvltsrekaa tdynqklkek fqyhphikci crhrhlpksi ysqiqeqrim kearrrkeln
      421 rikhskpgsv qmvseekkhi vavvk
//
LOCUS       XP_061009168             213 aa            linear   MAM 02-DEC-2023
DEFINITION  CDP-diacylglycerol--inositol 3-phosphatidyltransferase [Dama dama].
ACCESSION   XP_061009168
VERSION     XP_061009168.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153185.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..213
                     /product="CDP-diacylglycerol--inositol
                     3-phosphatidyltransferase"
                     /calculated_mol_wt=23466
     Region          7..>103
                     /region_name="PgsA"
                     /note="Phosphatidylglycerophosphate synthase [Lipid
                     transport and metabolism]; COG0558"
                     /db_xref="CDD:440324"
     CDS             1..213
                     /gene="CDIPT"
                     /coded_by="XM_061153185.1:400..1041"
                     /db_xref="GeneID:133063605"
ORIGIN      
        1 maseniflfv pnligyariv faiisfyfmp ccpltassfy llsglldafd ghaarvlnqg
       61 trfgamldml tdrcstmcll vnlallypra tllfqlsmsl dvashwlhlh ssvvrgsesh
      121 kmidlsgnpv lriyytsrpa lftlcagnel fycllylfnf segplvgsvg lfrmglwita
      181 piallkslis vihlitaarn maaldaadra krk
//
LOCUS       XP_061009169             120 aa            linear   MAM 02-DEC-2023
DEFINITION  putative protein T-ENOL [Dama dama].
ACCESSION   XP_061009169
VERSION     XP_061009169.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153186.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..120
                     /product="putative protein T-ENOL"
                     /calculated_mol_wt=13196
     CDS             1..120
                     /gene="LOC133063606"
                     /coded_by="XM_061153186.1:130..492"
                     /db_xref="GeneID:133063606"
ORIGIN      
        1 msstfarnee kkgsrpsqpt tpatslgcdl kvsrseeflt risteltdea lfvaachmnp
       61 vsikekqtqd rgtqiykhvf ftktrgtdtr sdrnrtrtka hllpsprekg alpsnltsgg
//
LOCUS       XP_061009170             890 aa            linear   MAM 02-DEC-2023
DEFINITION  major vault protein [Dama dama].
ACCESSION   XP_061009170
VERSION     XP_061009170.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153187.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..890
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..890
                     /product="major vault protein"
                     /calculated_mol_wt=98755
     Region          2..850
                     /region_name="PTZ00491"
                     /note="major vault protein; Provisional"
                     /db_xref="CDD:240439"
     CDS             1..890
                     /gene="MVP"
                     /coded_by="XM_061153187.1:165..2837"
                     /db_xref="GeneID:133063607"
ORIGIN      
        1 mameesiiri ppyhyihvld qnsnvsrvev gpktyirqdn erilftpvrm vtipprhycm
       61 vanpvardaq gtvlfdvtgq vrlrhadlei rlaqdpfplf pgevlekdit plqvvlpnta
      121 lhlkalldfe dkngqkvvag dewlfegpgt yipqkevevi eiiqatvikq nqalrlrark
      181 ecldrdgker vtgeewlvrs vgaylpavfe evldvvdavi ltektalhlr alqnfrdvrg
      241 vtrrtgeewl vtvqdteahv pdvyeevmgv vsvttlgphn ycvildpvgp dgknqlgqkl
      301 vfkgeqsffl qpgeklergi qnvyvlseqq glllralqpl eegdgkekvt hqagdrwlir
      361 gpleyvppak vevveerqai pldenegiyv qdvktgrvra vigstymltq devlwekelp
      421 pgveellnkg qdpladrgek etsktpklst prnktrvvsy rvphnaavqv ydyrekkarv
      481 vfgpelvllg peeqftvlsl sagrpkrpha rrtlclllgp dfftdvitie tadharlqlq
      541 laynwhfels drkdpqetak lfsvpdfvgd ackaiasrvr gavasvtfdd fhknsariir
      601 tavfgfetqe tkgpesmalp qprdravfpq nglvvssvdv qsvepvdqrt rdalqrsvql
      661 aieittnsqe aaakheaqrl eqeargrler qkildqseae karrellele alstavestg
      721 takaeaesra eaariegega vlqarlkada laieteaele rvkkvrelel vyaraqlele
      781 vskaqqlaev evkkfkqmte algpstirdl avagpemqvk llqslglkst litdgstpin
      841 lfntalgllg lgaeaqapak kptggpsvqe gllpvstaap ltlgnnqvvp
//
LOCUS       XP_061009172             442 aa            linear   MAM 02-DEC-2023
DEFINITION  proline-rich transmembrane protein 2 isoform X1 [Dama dama].
ACCESSION   XP_061009172
VERSION     XP_061009172.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153189.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..442
                     /product="proline-rich transmembrane protein 2 isoform X1"
                     /calculated_mol_wt=45698
     Region          <24..302
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          349..415
                     /region_name="CD225"
                     /note="Interferon-induced transmembrane protein;
                     pfam04505"
                     /db_xref="CDD:461336"
     CDS             1..442
                     /gene="PRRT2"
                     /coded_by="XM_061153189.1:479..1807"
                     /db_xref="GeneID:133063608"
ORIGIN      
        1 mshpkaketp tflpfprrqs ktgpekgalp swaallkatf slftpslspp lagfaavfaa
       61 apsfpqrpsp lsclkmaass sevseikgve egpqtqgegp ghsegrtgsp qvpagvsdep
      121 etlqpgpdvm gapvdsepkv glapettetp tgapeaaqar dlssspggea kanssteetc
      181 qelaskpevs keatadpesn lesaaplepa sepapqpepq sepqpepqsa sqststpalq
      241 pepptqeept seilsesmge kqengavvpl qagdgdgeeg papqphspps tktppangap
      301 prvlqqlvee drlgrahsgh sgsprgslsr hpssqlagsg veggegtqkp rdyiilails
      361 cfcpmwpvni vafayavmsr nslqqgdvdg aqrlgrvakl lsivalvggi liiiascvin
      421 lggewgsgtg weewkgwqgr ly
//
LOCUS       XP_061009173             425 aa            linear   MAM 02-DEC-2023
DEFINITION  proline-rich transmembrane protein 2 isoform X2 [Dama dama].
ACCESSION   XP_061009173
VERSION     XP_061009173.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153190.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..425
                     /product="proline-rich transmembrane protein 2 isoform X2"
                     /calculated_mol_wt=43737
     Region          <24..302
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          349..415
                     /region_name="CD225"
                     /note="Interferon-induced transmembrane protein;
                     pfam04505"
                     /db_xref="CDD:461336"
     CDS             1..425
                     /gene="PRRT2"
                     /coded_by="XM_061153190.1:479..1756"
                     /db_xref="GeneID:133063608"
ORIGIN      
        1 mshpkaketp tflpfprrqs ktgpekgalp swaallkatf slftpslspp lagfaavfaa
       61 apsfpqrpsp lsclkmaass sevseikgve egpqtqgegp ghsegrtgsp qvpagvsdep
      121 etlqpgpdvm gapvdsepkv glapettetp tgapeaaqar dlssspggea kanssteetc
      181 qelaskpevs keatadpesn lesaaplepa sepapqpepq sepqpepqsa sqststpalq
      241 pepptqeept seilsesmge kqengavvpl qagdgdgeeg papqphspps tktppangap
      301 prvlqqlvee drlgrahsgh sgsprgslsr hpssqlagsg veggegtqkp rdyiilails
      361 cfcpmwpvni vafayavmsr nslqqgdvdg aqrlgrvakl lsivalvggi liiiascvin
      421 lgvyk
//
LOCUS       XP_061009174             254 aa            linear   MAM 02-DEC-2023
DEFINITION  PAXIP1-associated glutamate-rich protein 1 [Dama dama].
ACCESSION   XP_061009174
VERSION     XP_061009174.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153191.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..254
                     /product="PAXIP1-associated glutamate-rich protein 1"
                     /calculated_mol_wt=27775
     Region          86..218
                     /region_name="PAXIP1_C"
                     /note="PAXIP1-associated-protein-1 C term PTIP binding
                     protein; pfam15364"
                     /db_xref="CDD:464674"
     CDS             1..254
                     /gene="PAGR1"
                     /coded_by="XM_061153191.1:131..895"
                     /db_xref="GeneID:133063609"
ORIGIN      
        1 mslvrghgdi aattapplse egevtsglqa lavedtggps asadqaeeeg eggreeaehe
       61 gpgaeevqge apspegeera kgesedwcvp csdeevelpa dgqswmppps eiqrlyella
      121 ahgtlelqae ilprrpptpe aqseeersde epeakeeeeq kphmptefdf ddepmtpkds
      181 lidrrrtpgs sarsqkrear ldkvlsdmkr hkkleeqilr tgrdlfslds edaspasppl
      241 rssggslfpr qrky
//
LOCUS       XP_061009175             532 aa            linear   MAM 02-DEC-2023
DEFINITION  myc-associated zinc finger protein isoform X1 [Dama dama].
ACCESSION   XP_061009175
VERSION     XP_061009175.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153192.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..532
                     /product="myc-associated zinc finger protein isoform X1"
                     /calculated_mol_wt=54161
     Region          194..214
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          283..303
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(288,290,292,294..295,298..299,302,316,318,322..323,
                     326..327,330,346,348,350,352..353,356..357)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          <305..362
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     Region          311..331
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(311,314,327,331)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          341..359
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          370..390
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          396..415
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(396,399,411,415)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     CDS             1..532
                     /gene="MAZ"
                     /coded_by="XM_061153192.1:48..1646"
                     /db_xref="GeneID:133063610"
ORIGIN      
        1 mfpvfpctll appfpvlgld srgvgglmns fpppqghaqn plqvgaelqs rffasqgcaq
       61 spfqaapapp ptpqapaaep lqvdllpvla aaqesaaaaa aaaaaaaaaa vaaappapaa
      121 astvdtaalk qppapppppp pvsapaaeaa ppvsaatiaa aaatavvapt stvavapvas
      181 alekktkskg pyicalcake fkngynlrrh eaihtgakag rvpsgamkmp tmvplsllsv
      241 pqlsgagggg geagagggaa avaaggvvtt tasgkrirkn hacemcgkaf rdvyhlnrhk
      301 lshsdekpyq cpvcqqrfkr kdrmsyhvrs hdgavhkpyn cshcgksfsr pdhlnshvrq
      361 vhsterpfkc ekceaafatk drlrahtvrh eekvpchvcg kmlssayisd hmkvhsqgph
      421 hvcelcnkgt gevcpmagev cpmaaaaaaa aaaaaavaap ptavgslsga egvpvssqpl
      481 psqpcsspgl ffsslsptte avalamsscs gvpcmfptlh plllrgphyn kf
//
LOCUS       XP_061009176             509 aa            linear   MAM 02-DEC-2023
DEFINITION  myc-associated zinc finger protein isoform X2 [Dama dama].
ACCESSION   XP_061009176
VERSION     XP_061009176.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153193.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..509
                     /product="myc-associated zinc finger protein isoform X2"
                     /calculated_mol_wt=51889
     Region          171..191
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          256..>304
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          260..280
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(265,267,269,271..272,275..276,279,293,295,299..300,
                     303..304,307,323,325,327,329..330,333..334)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          <282..339
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     Region          288..308
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(288,291,304,308)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          318..336
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          347..367
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          373..392
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(373,376,388,392)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     CDS             1..509
                     /gene="MAZ"
                     /coded_by="XM_061153193.1:52..1581"
                     /db_xref="GeneID:133063610"
ORIGIN      
        1 mdpgnwssfi fqghaqnplq vgaelqsrff asqgcaqspf qaapappptp qapaaeplqv
       61 dllpvlaaaq esaaaaaaaa aaaaaaavaa appapaaast vdtaalkqpp apppppppvs
      121 apaaeaappv saatiaaaaa tavvaptstv avapvasale kktkskgpyi calcakefkn
      181 gynlrrheai htgakagrvp sgamkmptmv plsllsvpql sgagggggea gagggaaava
      241 aggvvtttas gkrirknhac emcgkafrdv yhlnrhklsh sdekpyqcpv cqqrfkrkdr
      301 msyhvrshdg avhkpyncsh cgksfsrpdh lnshvrqvhs terpfkcekc eaafatkdrl
      361 rahtvrheek vpchvcgkml ssayisdhmk vhsqgphhvc elcnkgtgev cpmagevcpm
      421 aaaaaaaaaa aaavaappta vgslsgaegv pvssqplpsq pcsspglffs slsptteava
      481 lamsscsgvp cmfptlhpll lrgphynkf
//
LOCUS       XP_061009177             495 aa            linear   MAM 02-DEC-2023
DEFINITION  myc-associated zinc finger protein isoform X3 [Dama dama].
ACCESSION   XP_061009177
VERSION     XP_061009177.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153194.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..495
                     /product="myc-associated zinc finger protein isoform X3"
                     /calculated_mol_wt=51112
     Region          194..214
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          283..303
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(288,290,292,294..295,298..299,302,316,318,322..323,
                     326..327,330,346,348,350,352..353,356..357)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          <305..362
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     Region          311..331
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          341..359
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          370..390
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          396..415
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <402..>453
                     /region_name="KREPA"
                     /note="Kinetoplastid RNA Editing Protein A (KREPA);
                     cl49620"
                     /db_xref="CDD:483960"
     Region          423..439
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          456..476
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..495
                     /gene="MAZ"
                     /coded_by="XM_061153194.1:47..1534"
                     /db_xref="GeneID:133063610"
ORIGIN      
        1 mfpvfpctll appfpvlgld srgvgglmns fpppqghaqn plqvgaelqs rffasqgcaq
       61 spfqaapapp ptpqapaaep lqvdllpvla aaqesaaaaa aaaaaaaaaa vaaappapaa
      121 astvdtaalk qppapppppp pvsapaaeaa ppvsaatiaa aaatavvapt stvavapvas
      181 alekktkskg pyicalcake fkngynlrrh eaihtgakag rvpsgamkmp tmvplsllsv
      241 pqlsgagggg geagagggaa avaaggvvtt tasgkrirkn hacemcgkaf rdvyhlnrhk
      301 lshsdekpyq cpvcqqrfkr kdrmsyhvrs hdgavhkpyn cshcgksfsr pdhlnshvrq
      361 vhsterpfkc ekceaafatk drlrahtvrh eekvpchvcg kmlssayisd hmkvhsqgph
      421 hvcelcnkgf ttaaylriha vkdhglqapr adrilcklcs vhcktpaqla ghmqthlgga
      481 appvpgdapq pqptc
//
LOCUS       XP_061009178             485 aa            linear   MAM 02-DEC-2023
DEFINITION  myc-associated zinc finger protein isoform X4 [Dama dama].
ACCESSION   XP_061009178
VERSION     XP_061009178.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153195.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..485
                     /product="myc-associated zinc finger protein isoform X4"
                     /calculated_mol_wt=49264
     Region          194..214
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          283..303
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(288,290,292,294..295,298..299,302,316,318,322..323,
                     326..327,330,346,348,350,352..353,356..357)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          <305..362
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     Region          311..331
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          341..359
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          370..390
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          396..415
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..485
                     /gene="MAZ"
                     /coded_by="XM_061153195.1:47..1504"
                     /db_xref="GeneID:133063610"
ORIGIN      
        1 mfpvfpctll appfpvlgld srgvgglmns fpppqghaqn plqvgaelqs rffasqgcaq
       61 spfqaapapp ptpqapaaep lqvdllpvla aaqesaaaaa aaaaaaaaaa vaaappapaa
      121 astvdtaalk qppapppppp pvsapaaeaa ppvsaatiaa aaatavvapt stvavapvas
      181 alekktkskg pyicalcake fkngynlrrh eaihtgakag rvpsgamkmp tmvplsllsv
      241 pqlsgagggg geagagggaa avaaggvvtt tasgkrirkn hacemcgkaf rdvyhlnrhk
      301 lshsdekpyq cpvcqqrfkr kdrmsyhvrs hdgavhkpyn cshcgksfsr pdhlnshvrq
      361 vhsterpfkc ekceaafatk drlrahtvrh eekvpchvcg kmlssayisd hmkvhsqgph
      421 hvcelcnkgt gevcpmagev cpmaaaaaaa aaaaaavaap ptavgslsga egvpvssqpl
      481 psqpw
//
LOCUS       XP_061009179             484 aa            linear   MAM 02-DEC-2023
DEFINITION  myc-associated zinc finger protein isoform X5 [Dama dama].
ACCESSION   XP_061009179
VERSION     XP_061009179.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153196.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..484
                     /product="myc-associated zinc finger protein isoform X5"
                     /calculated_mol_wt=49078
     Region          194..214
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          283..303
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(288,290,292,294..295,298..299,302,316,318,322..323,
                     326..327,330,346,348,350,352..353,356..357)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          <305..362
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     Region          311..331
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          341..359
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          370..390
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          396..415
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..484
                     /gene="MAZ"
                     /coded_by="XM_061153196.1:48..1502"
                     /db_xref="GeneID:133063610"
ORIGIN      
        1 mfpvfpctll appfpvlgld srgvgglmns fpppqghaqn plqvgaelqs rffasqgcaq
       61 spfqaapapp ptpqapaaep lqvdllpvla aaqesaaaaa aaaaaaaaaa vaaappapaa
      121 astvdtaalk qppapppppp pvsapaaeaa ppvsaatiaa aaatavvapt stvavapvas
      181 alekktkskg pyicalcake fkngynlrrh eaihtgakag rvpsgamkmp tmvplsllsv
      241 pqlsgagggg geagagggaa avaaggvvtt tasgkrirkn hacemcgkaf rdvyhlnrhk
      301 lshsdekpyq cpvcqqrfkr kdrmsyhvrs hdgavhkpyn cshcgksfsr pdhlnshvrq
      361 vhsterpfkc ekceaafatk drlrahtvrh eekvpchvcg kmlssayisd hmkvhsqgph
      421 hvcelcnkgt gevcpmagev cpmaaaaaaa aaaaaavaap ptavgslsga egvpvssqpl
      481 psqp
//
LOCUS       XP_061009181             484 aa            linear   MAM 02-DEC-2023
DEFINITION  myc-associated zinc finger protein isoform X6 [Dama dama].
ACCESSION   XP_061009181
VERSION     XP_061009181.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153198.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..484
                     /product="myc-associated zinc finger protein isoform X6"
                     /calculated_mol_wt=49078
     Region          194..214
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          283..303
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(288,290,292,294..295,298..299,302,316,318,322..323,
                     326..327,330,346,348,350,352..353,356..357)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          <305..362
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     Region          311..331
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          341..359
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          370..390
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          396..415
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..484
                     /gene="MAZ"
                     /coded_by="XM_061153198.1:48..1502"
                     /db_xref="GeneID:133063610"
ORIGIN      
        1 mfpvfpctll appfpvlgld srgvgglmns fpppqghaqn plqvgaelqs rffasqgcaq
       61 spfqaapapp ptpqapaaep lqvdllpvla aaqesaaaaa aaaaaaaaaa vaaappapaa
      121 astvdtaalk qppapppppp pvsapaaeaa ppvsaatiaa aaatavvapt stvavapvas
      181 alekktkskg pyicalcake fkngynlrrh eaihtgakag rvpsgamkmp tmvplsllsv
      241 pqlsgagggg geagagggaa avaaggvvtt tasgkrirkn hacemcgkaf rdvyhlnrhk
      301 lshsdekpyq cpvcqqrfkr kdrmsyhvrs hdgavhkpyn cshcgksfsr pdhlnshvrq
      361 vhsterpfkc ekceaafatk drlrahtvrh eekvpchvcg kmlssayisd hmkvhsqgph
      421 hvcelcnkgt gevcpmagev cpmaaaaaaa aaaaaavaap ptavgslsga egvpvssqpl
      481 psqp
//
LOCUS       XP_061009182             462 aa            linear   MAM 02-DEC-2023
DEFINITION  myc-associated zinc finger protein isoform X7 [Dama dama].
ACCESSION   XP_061009182
VERSION     XP_061009182.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153199.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..462
                     /product="myc-associated zinc finger protein isoform X7"
                     /calculated_mol_wt=46992
     Region          171..191
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          260..280
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(265,267,269,271..272,275..276,279,293,295,299..300,
                     303..304,307,323,325,327,329..330,333..334)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          <282..339
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     Region          288..308
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          318..336
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          347..367
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          373..392
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..462
                     /gene="MAZ"
                     /coded_by="XM_061153199.1:49..1437"
                     /db_xref="GeneID:133063610"
ORIGIN      
        1 mdpgnwssfi fqghaqnplq vgaelqsrff asqgcaqspf qaapappptp qapaaeplqv
       61 dllpvlaaaq esaaaaaaaa aaaaaaavaa appapaaast vdtaalkqpp apppppppvs
      121 apaaeaappv saatiaaaaa tavvaptstv avapvasale kktkskgpyi calcakefkn
      181 gynlrrheai htgakagrvp sgamkmptmv plsllsvpql sgagggggea gagggaaava
      241 aggvvtttas gkrirknhac emcgkafrdv yhlnrhklsh sdekpyqcpv cqqrfkrkdr
      301 msyhvrshdg avhkpyncsh cgksfsrpdh lnshvrqvhs terpfkcekc eaafatkdrl
      361 rahtvrheek vpchvcgkml ssayisdhmk vhsqgphhvc elcnkgtgev cpmagevcpm
      421 aaaaaaaaaa aaavaappta vgslsgaegv pvssqplpsq pw
//
LOCUS       XP_061009183             698 aa            linear   MAM 02-DEC-2023
DEFINITION  kinesin-like protein KIF22 [Dama dama].
ACCESSION   XP_061009183
VERSION     XP_061009183.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153200.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..698
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..698
                     /product="kinesin-like protein KIF22"
                     /calculated_mol_wt=77333
     Region          73..396
                     /region_name="KISc_KID_like"
                     /note="Kinesin motor domain, KIF22/Kid-like subgroup;
                     cd01376"
                     /db_xref="CDD:276827"
     Site            order(81,157,160,162..165,304)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276827"
     Site            order(351,354,357)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276827"
     Region          629..679
                     /region_name="ComEA"
                     /note="DNA uptake protein ComE or related DNA-binding
                     protein [Replication, recombination and repair]; COG1555"
                     /db_xref="CDD:441164"
     CDS             1..698
                     /gene="KIF22"
                     /coded_by="XM_061153200.1:9..2105"
                     /db_xref="GeneID:133063611"
ORIGIN      
        1 mqelpatssr dwwnpverag qreirierrt qegsgmdagv parrrremaa avsgagrcrl
       61 skvgagrrpp parvrvavrl rpfvdgtage ndtpcvrgld scsleianwr nhqetlkyqf
      121 dafygerssq qdiyagsvqp ilrhllegqn asvlaygptg agkthtmlgs peqpgvipra
      181 lmdllqltre egaegrpwal svtmsyleiy qekvldllep ssgdlvired crgnilipgl
      241 tqkpitsfad ferhflpasr nrtvgatrln qrssrshavl lvkvdqrerl apfrqregkl
      301 ylidlagsed nrrtgnkglr lkesgaints lfvlgkvvda lnqglprvpy rdskltrllq
      361 dslggsahsi lianiaperr fyldtvsaln faarskevin rpftneslql pvlapvklsq
      421 kellgpseak rargpeeeet rspklpvapa sasqklsplq klssmdpaml erllsldrll
      481 gsqgsqgtpl lstpkrermv lmktveekdl eierlkmkqk eleakvlaqe aadpkekeny
      541 sptmlrplar rivtvakplk kavvmplqli qeqaaspnae ihilkkksrk rklesldasq
      601 peekaedgwe lqispellah grqkildlln egsardlrsl qrigqkkaql ivgwrelhgp
      661 fsqvedlerv egisgkqmes flkanilgla agqgcgps
//
LOCUS       XP_061009184             547 aa            linear   MAM 02-DEC-2023
DEFINITION  leukosialin [Dama dama].
ACCESSION   XP_061009184
VERSION     XP_061009184.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153201.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..547
                     /product="leukosialin"
                     /calculated_mol_wt=55432
     Region          <16..390
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     CDS             1..547
                     /gene="SPN"
                     /coded_by="XM_061153201.1:118..1761"
                     /db_xref="GeneID:133063612"
ORIGIN      
        1 milllllfgs vgaknmteas pnsaplwisk titrslssvs giptfnsmtt slttnkvpem
       61 gdnpgnqtfp lsstpdtanv vsspetspaa srgnpvsest isqedstkks tmpmkipdgp
      121 sipgvsvmkt tgfptmtget matsplettn gtsgtpvtma tspletssgt sgtpvtmats
      181 plettngtng tpvtmatspl etssgtsgtp vtmatsplet tngkngtpvt matspletss
      241 gtsgtpvtma tsplettngt ngtpvtmats pletssgask llltmaassl eisggtsrpp
      301 vtmatsslet ssgtreplvt tasnslktis mtsgspvimk tsspeiskgt sgllvtmpat
      361 slktpmgtsg spspgvttss pnistkvskr dklipaqgtk gtllvavlva llvvivlval
      421 illwrrrqkr ktgvltlsrs gkrngvvdaw agvarvsdee amtategasg gnsdsngphr
      481 egsgqrptlt tffgrrksrq gsvaleelka gpasslkgee eplvgnedeg aeaptsngpe
      541 akevktp
//
LOCUS       XP_061009185             218 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein C16orf54 homolog [Dama dama].
ACCESSION   XP_061009185
VERSION     XP_061009185.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153202.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..218
                     /product="transmembrane protein C16orf54 homolog"
                     /calculated_mol_wt=23409
     Region          1..217
                     /region_name="DUF4689"
                     /note="Domain of unknown function (DUF4689); pfam15755"
                     /db_xref="CDD:406240"
     CDS             1..218
                     /gene="C10H16orf54"
                     /coded_by="XM_061153202.1:375..1031"
                     /db_xref="GeneID:133063613"
ORIGIN      
        1 mpptpalpsg qteasswvpl pcgpcipimv alaalaavfl latavlaerl frrslppdps
       61 iraptlvwrp ggelwieprg tprersedwy gsevplltdg apdppaqggt learatappa
      121 astprsppss lvpqtppnap tqstfwgpqv weerpqapgl vswaeperrp easvypgspq
      181 arrvrpgspd lewglqprvt leqisafwrr egrssvgf
//
LOCUS       XP_061009186             218 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein C16orf54 homolog [Dama dama].
ACCESSION   XP_061009186
VERSION     XP_061009186.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153203.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..218
                     /product="transmembrane protein C16orf54 homolog"
                     /calculated_mol_wt=23409
     Region          1..217
                     /region_name="DUF4689"
                     /note="Domain of unknown function (DUF4689); pfam15755"
                     /db_xref="CDD:406240"
     CDS             1..218
                     /gene="C10H16orf54"
                     /coded_by="XM_061153203.1:698..1354"
                     /db_xref="GeneID:133063613"
ORIGIN      
        1 mpptpalpsg qteasswvpl pcgpcipimv alaalaavfl latavlaerl frrslppdps
       61 iraptlvwrp ggelwieprg tprersedwy gsevplltdg apdppaqggt learatappa
      121 astprsppss lvpqtppnap tqstfwgpqv weerpqapgl vswaeperrp easvypgspq
      181 arrvrpgspd lewglqprvt leqisafwrr egrssvgf
//
LOCUS       XP_061009187             218 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein C16orf54 homolog [Dama dama].
ACCESSION   XP_061009187
VERSION     XP_061009187.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153204.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..218
                     /product="transmembrane protein C16orf54 homolog"
                     /calculated_mol_wt=23409
     Region          1..217
                     /region_name="DUF4689"
                     /note="Domain of unknown function (DUF4689); pfam15755"
                     /db_xref="CDD:406240"
     CDS             1..218
                     /gene="C10H16orf54"
                     /coded_by="XM_061153204.1:426..1082"
                     /db_xref="GeneID:133063613"
ORIGIN      
        1 mpptpalpsg qteasswvpl pcgpcipimv alaalaavfl latavlaerl frrslppdps
       61 iraptlvwrp ggelwieprg tprersedwy gsevplltdg apdppaqggt learatappa
      121 astprsppss lvpqtppnap tqstfwgpqv weerpqapgl vswaeperrp easvypgspq
      181 arrvrpgspd lewglqprvt leqisafwrr egrssvgf
//
LOCUS       XP_061009188             218 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein C16orf54 homolog [Dama dama].
ACCESSION   XP_061009188
VERSION     XP_061009188.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153205.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..218
                     /product="transmembrane protein C16orf54 homolog"
                     /calculated_mol_wt=23409
     Region          1..217
                     /region_name="DUF4689"
                     /note="Domain of unknown function (DUF4689); pfam15755"
                     /db_xref="CDD:406240"
     CDS             1..218
                     /gene="C10H16orf54"
                     /coded_by="XM_061153205.1:457..1113"
                     /db_xref="GeneID:133063613"
ORIGIN      
        1 mpptpalpsg qteasswvpl pcgpcipimv alaalaavfl latavlaerl frrslppdps
       61 iraptlvwrp ggelwieprg tprersedwy gsevplltdg apdppaqggt learatappa
      121 astprsppss lvpqtppnap tqstfwgpqv weerpqapgl vswaeperrp easvypgspq
      181 arrvrpgspd lewglqprvt leqisafwrr egrssvgf
//
LOCUS       XP_061009189             218 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein C16orf54 homolog [Dama dama].
ACCESSION   XP_061009189
VERSION     XP_061009189.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153206.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..218
                     /product="transmembrane protein C16orf54 homolog"
                     /calculated_mol_wt=23409
     Region          1..217
                     /region_name="DUF4689"
                     /note="Domain of unknown function (DUF4689); pfam15755"
                     /db_xref="CDD:406240"
     CDS             1..218
                     /gene="C10H16orf54"
                     /coded_by="XM_061153206.1:408..1064"
                     /db_xref="GeneID:133063613"
ORIGIN      
        1 mpptpalpsg qteasswvpl pcgpcipimv alaalaavfl latavlaerl frrslppdps
       61 iraptlvwrp ggelwieprg tprersedwy gsevplltdg apdppaqggt learatappa
      121 astprsppss lvpqtppnap tqstfwgpqv weerpqapgl vswaeperrp easvypgspq
      181 arrvrpgspd lewglqprvt leqisafwrr egrssvgf
//
LOCUS       XP_061009191             218 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein C16orf54 homolog [Dama dama].
ACCESSION   XP_061009191
VERSION     XP_061009191.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153208.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..218
                     /product="transmembrane protein C16orf54 homolog"
                     /calculated_mol_wt=23409
     Region          1..217
                     /region_name="DUF4689"
                     /note="Domain of unknown function (DUF4689); pfam15755"
                     /db_xref="CDD:406240"
     CDS             1..218
                     /gene="C10H16orf54"
                     /coded_by="XM_061153208.1:502..1158"
                     /db_xref="GeneID:133063613"
ORIGIN      
        1 mpptpalpsg qteasswvpl pcgpcipimv alaalaavfl latavlaerl frrslppdps
       61 iraptlvwrp ggelwieprg tprersedwy gsevplltdg apdppaqggt learatappa
      121 astprsppss lvpqtppnap tqstfwgpqv weerpqapgl vswaeperrp easvypgspq
      181 arrvrpgspd lewglqprvt leqisafwrr egrssvgf
//
LOCUS       XP_061009192             114 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein P1-like [Dama dama].
ACCESSION   XP_061009192
VERSION     XP_061009192.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153209.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..114
                     /product="large ribosomal subunit protein P1-like"
                     /calculated_mol_wt=11383
     Region          6..>63
                     /region_name="Ribosomal_P1"
                     /note="Ribosomal protein P1. This subfamily represents the
                     eukaryotic large ribosomal protein P1. Eukaryotic P1 and
                     P2 are functionally equivalent to the bacterial protein
                     L7/L12, but are not homologous to L7/L12. P1 is located in
                     the L12 stalk, with proteins...; cd05831"
                     /db_xref="CDD:100109"
     CDS             1..114
                     /gene="LOC133063615"
                     /coded_by="XM_061153209.1:295..639"
                     /db_xref="GeneID:133063615"
ORIGIN      
        1 masvselaci ysalilhdde vtvtedkina likaagvnve lfwpglfaka lanvnigsli
       61 cnvgaggpap aagaapaggp apataaapae ekkveakkee seesdddmgf glfd
//
LOCUS       XP_061009193             114 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein P1-like [Dama dama].
ACCESSION   XP_061009193
VERSION     XP_061009193.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153210.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..114
                     /product="large ribosomal subunit protein P1-like"
                     /calculated_mol_wt=11383
     Region          6..>63
                     /region_name="Ribosomal_P1"
                     /note="Ribosomal protein P1. This subfamily represents the
                     eukaryotic large ribosomal protein P1. Eukaryotic P1 and
                     P2 are functionally equivalent to the bacterial protein
                     L7/L12, but are not homologous to L7/L12. P1 is located in
                     the L12 stalk, with proteins...; cd05831"
                     /db_xref="CDD:100109"
     CDS             1..114
                     /gene="LOC133063615"
                     /coded_by="XM_061153210.1:231..575"
                     /db_xref="GeneID:133063615"
ORIGIN      
        1 masvselaci ysalilhdde vtvtedkina likaagvnve lfwpglfaka lanvnigsli
       61 cnvgaggpap aagaapaggp apataaapae ekkveakkee seesdddmgf glfd
//
LOCUS       XP_061009194             802 aa            linear   MAM 02-DEC-2023
DEFINITION  TBC1 domain family member 10B [Dama dama].
ACCESSION   XP_061009194
VERSION     XP_061009194.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153211.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..802
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..802
                     /product="TBC1 domain family member 10B"
                     /calculated_mol_wt=86894
     Region          <4..257
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          349..554
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     CDS             1..802
                     /gene="TBC1D10B"
                     /coded_by="XM_061153211.1:16..2424"
                     /db_xref="GeneID:133063616"
ORIGIN      
        1 metgpaplva pprrhgapaa psppprgsra gpvlvvapgp pvttatsapv tlvapgearp
       61 awvpgptqts dsapgpmvtg stevgqtlea spdapraqvs speplvpeav agaemsvaqa
      121 pgadppktee aitspdpgpg tltrtpsrta pgaltakppl apkpgttvas gvtarvaavt
      181 agqvtsghga aaatsastgq apedpsgpgi gssgtceaqv avvtvtpape paensqdlgs
      241 msslgpgisg prgqapdtls yldsvslmsg tlesladdvs smgsdseing lalrktdkyg
      301 flggsqysgs lessipvdva rqrelkwlem fshwdkwlsr rfqkvklrcr kgipsslrak
      361 awqylsnske lleqnpgkfe elerapgdpk wldviekdlh rqfpfhemfa argghgqqdl
      421 yrilkaytiy rpdegycqaq apvaavllmh mpaeqafwcl vqicdkylpg yysagleaiq
      481 ldgeiffall rrasplahrh lrrqridpvl ymtewfmcif artlpwasvl rvwdmffceg
      541 vkiifrvalv llrhtlgsve klrscqgmye tmeqlrnlpq qcmqedflvh evtnlqvtea
      601 lierenaaql kkwletrgel qyrpsrrlhg sraiheerrr qlpplgpsss llslpglksr
      661 gsragggvps ppppvrrasa gpapgpvvta eglhpslpsp tgnsaplaps skearrqeke
      721 rqkqekerek erqkqekere kqekerqkqe keqqkqeker qkqekkaqgr klslrrkadg
      781 ppapqdsgdr ssasearqda yf
//
LOCUS       XP_061009195             340 aa            linear   MAM 02-DEC-2023
DEFINITION  CD2 antigen cytoplasmic tail-binding protein 2 [Dama dama].
ACCESSION   XP_061009195
VERSION     XP_061009195.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153212.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..340
                     /product="CD2 antigen cytoplasmic tail-binding protein 2"
                     /calculated_mol_wt=37447
     Region          279..339
                     /region_name="GYF"
                     /note="GYF domain: contains conserved Gly-Tyr-Phe
                     residues; Proline-binding domain in CD2-binding and other
                     proteins. Involved in signaling lymphocyte activity. Also
                     present in other unrelated proteins (mainly unknown)
                     derived from diverse eukaryotic species; cd00072"
                     /db_xref="CDD:238027"
     Site            296..312
                     /site_type="active"
                     /note="proline binding motif [active]"
                     /db_xref="CDD:238027"
     Site            order(306,311..312)
                     /site_type="active"
                     /note="proline interaction residues [active]"
                     /db_xref="CDD:238027"
     CDS             1..340
                     /gene="CD2BP2"
                     /coded_by="XM_061153212.1:152..1174"
                     /db_xref="GeneID:133063617"
ORIGIN      
        1 mpkrkvtfqg vgdddedeig apkkklvdpi agvggpgsrf kgkhsldsde eeeedegssk
       61 ydilasedve gqeaatlpse ggvritpfnl qeemeeghfd adgnyflnrd aqirdswldn
      121 idwvkirerp pdqrppsdse eddslgqtpm stqallegll elmlpretva galrrlgarg
      181 ggkegskgpg rpsspqrldr lsgladqmva qgnlgvyqet rerlamrlkg lgcqtqgprd
      241 ptpppsldmf aeevaegele tptpaqreet espgdgladv mweykwentg daelygpfts
      301 tqmqtwvneg yfpdgvycrk ldppggqfyn skridfdlyt
//
LOCUS       XP_061009196             340 aa            linear   MAM 02-DEC-2023
DEFINITION  CD2 antigen cytoplasmic tail-binding protein 2 [Dama dama].
ACCESSION   XP_061009196
VERSION     XP_061009196.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153213.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..340
                     /product="CD2 antigen cytoplasmic tail-binding protein 2"
                     /calculated_mol_wt=37447
     Region          279..339
                     /region_name="GYF"
                     /note="GYF domain: contains conserved Gly-Tyr-Phe
                     residues; Proline-binding domain in CD2-binding and other
                     proteins. Involved in signaling lymphocyte activity. Also
                     present in other unrelated proteins (mainly unknown)
                     derived from diverse eukaryotic species; cd00072"
                     /db_xref="CDD:238027"
     Site            296..312
                     /site_type="active"
                     /note="proline binding motif [active]"
                     /db_xref="CDD:238027"
     Site            order(306,311..312)
                     /site_type="active"
                     /note="proline interaction residues [active]"
                     /db_xref="CDD:238027"
     CDS             1..340
                     /gene="CD2BP2"
                     /coded_by="XM_061153213.1:158..1180"
                     /db_xref="GeneID:133063617"
ORIGIN      
        1 mpkrkvtfqg vgdddedeig apkkklvdpi agvggpgsrf kgkhsldsde eeeedegssk
       61 ydilasedve gqeaatlpse ggvritpfnl qeemeeghfd adgnyflnrd aqirdswldn
      121 idwvkirerp pdqrppsdse eddslgqtpm stqallegll elmlpretva galrrlgarg
      181 ggkegskgpg rpsspqrldr lsgladqmva qgnlgvyqet rerlamrlkg lgcqtqgprd
      241 ptpppsldmf aeevaegele tptpaqreet espgdgladv mweykwentg daelygpfts
      301 tqmqtwvneg yfpdgvycrk ldppggqfyn skridfdlyt
//
LOCUS       XP_061009197             209 aa            linear   MAM 02-DEC-2023
DEFINITION  sesquipedalian-1-like [Dama dama].
ACCESSION   XP_061009197
VERSION     XP_061009197.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153214.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..209
                     /product="sesquipedalian-1-like"
                     /calculated_mol_wt=23415
     Region          13..133
                     /region_name="PH_Ses"
                     /note="Sesquipedalian family Pleckstrin homology (PH)
                     domain; cd13288"
                     /db_xref="CDD:270105"
     CDS             1..209
                     /gene="LOC133063618"
                     /coded_by="XM_061153214.1:144..773"
                     /db_xref="GeneID:133063618"
ORIGIN      
        1 mklhqksvlr ffrgyrtqap dregillkkg arntsyqrrw filrgnllfy lehqadhtpl
       61 glillencqv eprlgatepy aftirtpggg rrayklaaet peelrawlwa lagatwtrla
      121 vllrpleaqy relcqaagqe pgsppedcss patprtlfsf qelhehfgke irmlqavhrq
      181 fqeasdnggs rspagegeag aqqllmsgd
//
LOCUS       XP_061009198             428 aa            linear   MAM 02-DEC-2023
DEFINITION  septin-1 [Dama dama].
ACCESSION   XP_061009198
VERSION     XP_061009198.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153215.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..428
                     /product="septin-1"
                     /calculated_mol_wt=48415
     Region          84..357
                     /region_name="Septin"
                     /note="pfam00735"
                     /db_xref="CDD:395596"
     Site            93..100
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206649"
     Site            order(95..101,150,153,231..232,234,290..291)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206649"
     Site            125..133
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206649"
     Site            127
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206649"
     Site            150..153
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206649"
     Site            order(152..187,188..197)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206649"
     Site            231..234
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206649"
     Site            290..292
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206649"
     CDS             1..428
                     /gene="SEPTIN1"
                     /coded_by="XM_061153215.1:16..1302"
                     /db_xref="GeneID:133063619"
ORIGIN      
        1 mgkgtqesrt srsrswfspl lwaswsisap ivpaplfaal nflphqrkwg epsgaataig
       61 amdkeyvgfa alpnqlhrks vkkgfdftlm vagesglgks tlinslfltn lyedrqipea
      121 sarltqtlti errgveieeg gikvkltvvd tpgfgdsvdc sdcwlpvvrf ieeqfeqylr
      181 desglnrkni qdsrvhccly fispfgrglr pldvaflrav hekvniipvi gkadalmpke
      241 tqalkqkire qlkeeeiniy qfpecdsded edfkrqdaem kesipfavvg scevvrdggp
      301 rpvrgrhysw gtvevenphh cdflnlrrml vqthlqdlke vthdllyegy rarclqslar
      361 pgardrasrs klsrqsatei plpmlpladt eklirekdee lrrmqemlek mqaqmqlsqa
      421 qgeqsdal
//
LOCUS       XP_061009199             151 aa            linear   MAM 02-DEC-2023
DEFINITION  dCTP pyrophosphatase 1 [Dama dama].
ACCESSION   XP_061009199
VERSION     XP_061009199.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153216.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..151
                     /product="dCTP pyrophosphatase 1"
                     /calculated_mol_wt=16702
     Region          34..124
                     /region_name="NTP-PPase_RS21-C6_like"
                     /note="Nucleoside Triphosphate Pyrophosphohydrolase (EC
                     3.6.1.8) MazG-like domain found in mouse RS21-C6 protein
                     and its homologs; cd11537"
                     /db_xref="CDD:212144"
     Site            order(36..37,40,43..44,46,52..53,56..57,59..60,63,66..67,
                     70..71,91..93,95..97,99..100,102,105..106,108..109,111,
                     113..114,116..118,120..121,123..124)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:212144"
     Site            order(37,62,65,94,97,101)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:212144"
     Site            order(49,53..54,56..58,60..61,64..65,67,70..71,101)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:212144"
     CDS             1..151
                     /gene="DCTPP1"
                     /coded_by="XM_061153216.1:83..538"
                     /db_xref="GeneID:133063621"
ORIGIN      
        1 msaseetrgg argestaapg sfsfsseptl edirrlhaef aaerdweqfh qprnlllalv
       61 gevgelaelf qwkpdeepgp qawspreraa lqeelsdvli ylvalaarcr vdlpqavlsk
      121 mdinrrrypa hlsrgsacky tdlphgatse n
//
LOCUS       XP_061009200             451 aa            linear   MAM 02-DEC-2023
DEFINITION  selenide, water dikinase 2 [Dama dama].
ACCESSION   XP_061009200
VERSION     XP_061009200.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153217.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..451
                     /product="selenide, water dikinase 2"
                     /calculated_mol_wt=47727
     Region          54..410
                     /region_name="SelD"
                     /note="Selenophosphate synthetase (SelD) catalyzes the
                     conversion of selenium to selenophosphate which is
                     required by a number of bacterial, archaeal and eukaryotic
                     organisms for synthesis of Secys-tRNA, the precursor of
                     selenocysteine in selenoenzymes. The...; cd02195"
                     /db_xref="CDD:100031"
     Site            order(135..138,140,142,164,175,178,181,217,224..225,229,
                     331)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:100031"
     Site            order(160,164,215..217)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:100031"
     CDS             1..451
                     /gene="SEPHS2"
                     /coded_by="XM_061153217.1:197..1552"
                     /db_xref="GeneID:133063622"
ORIGIN      
        1 maevaatgag geamaavaag esssgpvclp lgrgfsnyrp fepqalglsp swrltgfsgm
       61 kgugckvpqe tllkllaglt rpevlpapgr glvggpeeta qeaglpmrse psppfptlgi
      121 gmdscviplr hgglslvqtt dffyplvedp ymmgriacan vlsdlyamgv tecdnmlmll
      181 svsqsmpeee rekitplmik gfrdaaeegg tavtggqtvv npwiiiggva tvvcqpnefi
      241 lpdsavvgdv lvltkplgtq vavnahqwld nperwnkikm vvsreevelg yqeamfnmat
      301 lnriaaglmh tfnahaatdi tgfgilghsq nlakqqrnev sfvihnlpii akmaaiskas
      361 grfgllqgts aetsggllic lpreqaarfc seiksskyge ghqawivgiv ekgnrtarii
      421 dkprvievlp rgataatlap enssasseps l
//
LOCUS       XP_061009201            1170 aa            linear   MAM 02-DEC-2023
DEFINITION  integrin alpha-L isoform X1 [Dama dama].
ACCESSION   XP_061009201
VERSION     XP_061009201.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153218.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1170
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1170
                     /product="integrin alpha-L isoform X1"
                     /calculated_mol_wt=129204
     Region          152..320
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Site            order(159,228,261)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238119"
     Region          454..>494
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          514..566
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          576..621
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          610..1008
                     /region_name="Integrin_alpha2"
                     /note="Integrin alpha; pfam08441"
                     /db_xref="CDD:462478"
     Region          1109..1123
                     /region_name="Integrin_alpha"
                     /note="Integrin alpha cytoplasmic region; pfam00357"
                     /db_xref="CDD:459778"
     CDS             1..1170
                     /gene="ITGAL"
                     /coded_by="XM_061153218.1:184..3696"
                     /db_xref="GeneID:133063623"
ORIGIN      
        1 mnsciivmrl llsgpflfap awsynldvrh vqnfsfplag rhfgyrvlqv gsrvvvgaps
       61 egnsrgnlyq cqpetgeclq vtlssnytsk ylgmtlatdp tsgnvlacdp glsrtcdqni
      121 ylsglcylmh qnlrgpvlqg hpgyqecikg nvdlvflfdg srslqqdefe kivdfmkdvm
      181 kklsnssyqf aavqfstdfk teftfldyir hkdpdsllag vkhmrlltnt fgainyvake
      241 vfrqdlgarp datkvliiit dgeatdehni daakdiiryi igigknfqtk esqealhqfa
      301 skpaeefvki ldtfeklkdl ftelqkkiyv iegtskqdlt sfnmelsssg isadlsedhg
      361 ivgavgakdw aggfldlkad lesstfvgne pltvesragy lgytvtwlps rgtmsllatg
      421 apryqhvgrv llfqqpkggg pwsqiqeidg sqvgsyfgge lcgvdmdrdg etellliaap
      481 lyygeqrggr vfiyqkkqle fqmvselqge tgyplgrfga aiaaltding deltdvavga
      541 pleeqgavyi fngqqgglsp rpsqriegtq mfsgiqwfgr sihgvkdlgg dgladvavga
      601 egqvvvlssr pvvdiitsms fspaeipvhe vecsystsnq kkegvnitvc fqvkslistf
      661 qghlvanlty tlqldghrtr srglfpggkh eltrntavts vkscfmfwfh fplciqdlis
      721 pinvslsysl weeegtprdp raqgrdippi lkpsphsetk eipfekncge dktceadlkl
      781 tfsdmgskil rltpsaslsv rltlrntaed aywvqvilif phglsfrkve mlkphshvpv
      841 gceelpeeit lqsralscnv sspifgadsv vdiqvmfhtl qkdswgdfie leasvscnne
      901 dlsllednsv sasipvmypi niltkdqens tlyisftpes pktqyvkhiy qvriqptnyd
      961 nvpplealvr iprlhsegli thewsiqmep pvncspqnle spsdvaepcs fgaefrcpvd
     1021 frqeilvqvi gkvelrgkie asstlslcss lsisfnsskh fhlygsnasm aqvvmkvdlv
     1081 yekemlylyv lsgiggllll llifialykv gffkrnlkek meanvdasse ipgedagqpe
     1141 mekefkdpsc leplqkndac pededgsggd
//
LOCUS       XP_061009203            1169 aa            linear   MAM 02-DEC-2023
DEFINITION  integrin alpha-L isoform X2 [Dama dama].
ACCESSION   XP_061009203
VERSION     XP_061009203.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153220.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1169
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1169
                     /product="integrin alpha-L isoform X2"
                     /calculated_mol_wt=129076
     Region          152..320
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Site            order(159,228,261)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238119"
     Region          454..>494
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          514..566
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          576..621
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          610..1007
                     /region_name="Integrin_alpha2"
                     /note="Integrin alpha; pfam08441"
                     /db_xref="CDD:462478"
     Region          1108..1122
                     /region_name="Integrin_alpha"
                     /note="Integrin alpha cytoplasmic region; pfam00357"
                     /db_xref="CDD:459778"
     CDS             1..1169
                     /gene="ITGAL"
                     /coded_by="XM_061153220.1:184..3693"
                     /db_xref="GeneID:133063623"
ORIGIN      
        1 mnsciivmrl llsgpflfap awsynldvrh vqnfsfplag rhfgyrvlqv gsrvvvgaps
       61 egnsrgnlyq cqpetgeclq vtlssnytsk ylgmtlatdp tsgnvlacdp glsrtcdqni
      121 ylsglcylmh qnlrgpvlqg hpgyqecikg nvdlvflfdg srslqqdefe kivdfmkdvm
      181 kklsnssyqf aavqfstdfk teftfldyir hkdpdsllag vkhmrlltnt fgainyvake
      241 vfrqdlgarp datkvliiit dgeatdehni daakdiiryi igigknfqtk esqealhqfa
      301 skpaeefvki ldtfeklkdl ftelqkkiyv iegtskqdlt sfnmelsssg isadlsedhg
      361 ivgavgakdw aggfldlkad lesstfvgne pltvesragy lgytvtwlps rgtmsllatg
      421 apryqhvgrv llfqqpkggg pwsqiqeidg sqvgsyfgge lcgvdmdrdg etellliaap
      481 lyygeqrggr vfiyqkkqle fqmvselqge tgyplgrfga aiaaltding deltdvavga
      541 pleeqgavyi fngqqgglsp rpsqriegtq mfsgiqwfgr sihgvkdlgg dgladvavga
      601 egqvvvlssr pvvdiitsms fspaeipvhe vecsystsnq kkegvnitvc fqvkslistf
      661 qghlvanlty tlqldghrtr srglfpggkh eltrntavts vkscfmfwfh fplciqdlis
      721 pinvslsysl weeegtprdp ragrdippil kpsphsetke ipfekncged ktceadlklt
      781 fsdmgskilr ltpsaslsvr ltlrntaeda ywvqvilifp hglsfrkvem lkphshvpvg
      841 ceelpeeitl qsralscnvs spifgadsvv diqvmfhtlq kdswgdfiel easvscnned
      901 lsllednsvs asipvmypin iltkdqenst lyisftpesp ktqyvkhiyq vriqptnydn
      961 vpplealvri prlhseglit hewsiqmepp vncspqnles psdvaepcsf gaefrcpvdf
     1021 rqeilvqvig kvelrgkiea sstlslcssl sisfnsskhf hlygsnasma qvvmkvdlvy
     1081 ekemlylyvl sgigglllll lifialykvg ffkrnlkekm eanvdassei pgedagqpem
     1141 ekefkdpscl eplqkndacp ededgsggd
//
LOCUS       XP_061009204             239 aa            linear   MAM 02-DEC-2023
DEFINITION  proteasome activator complex subunit 2-like [Dama dama].
ACCESSION   XP_061009204
VERSION     XP_061009204.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153221.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..239
                     /product="proteasome activator complex subunit 2-like"
                     /calculated_mol_wt=27463
     Region          12..71
                     /region_name="PA28_alpha"
                     /note="Proteasome activator pa28 alpha subunit; pfam02251"
                     /db_xref="CDD:460507"
     Region          93..237
                     /region_name="PA28_beta"
                     /note="Proteasome activator pa28 beta subunit; pfam02252"
                     /db_xref="CDD:460508"
     CDS             1..239
                     /gene="LOC133063624"
                     /coded_by="XM_061153221.1:27..746"
                     /db_xref="GeneID:133063624"
ORIGIN      
        1 makpcwvrls gearkqvdvf rqnlfqeaee flyrflpqki iylnqllqed sftvtdlnsl
       61 qapldipipe pppkddemet dkqekkevpk cgflpgnekv lvllalvkpe vwtlkekcil
      121 vitwiqhlip kiedgndfvv aiqekvlerv navktkvgaf qttiskyfse rgdavakask
      181 ethvmdyral vherdeavyg elramvldlr afyaelyhii ssnlkkivnp kdeekpsmy
//
LOCUS       XP_061009205             561 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 768 [Dama dama].
ACCESSION   XP_061009205
VERSION     XP_061009205.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153222.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..561
                     /product="zinc finger protein 768"
                     /calculated_mol_wt=62161
     Region          <17..>182
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     Region          284..304
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(289,291,293,295..296,299..300,303,317,319,323..324,
                     327..328,331,345,347,349,351..352,355..356,359)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          <297..525
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          312..332
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(312,315,328,332)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          340..360
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          368..388
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          396..416
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          424..444
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          452..472
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          480..500
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(485,487,489,491..492,495..496,499,513,515,519..520,
                     523..524,527,541,543,545,547..548,551..552,555)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          508..528
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(508,511,524,528)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          534..556
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          536..556
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..561
                     /gene="ZNF768"
                     /coded_by="XM_061153222.1:196..1881"
                     /db_xref="GeneID:133063625"
ORIGIN      
        1 mereaspwgl eprdmqspde mgspegslkg nmseneeeei sqqegtgdye veeisfglep
       61 qspgfgpqsp efepqsprfe pespgfesrs pgfvppspef aprspesdsq spdfepqspr
      121 yepqspgyep kspgyeprsp gyepkspgye prspgyesqs pryesqspgy epqnpefktq
      181 spefeaessk fqegaemlln peeknplsip lgvhpldaft qgfgeqpagg mplgppfemp
      241 tgallappqf emlqnplglt gtlrgpgrrg grarggqgpr pnicgicgks fgrgstliqh
      301 qrihtgekpy kcevcskafs qssdlikhqr thtgerpykc prcgkafads syllrhqrth
      361 sgqkpykcph cgkafgdssy llrhqrthsh erpyscpecg kcysqnsslr shqrvhtgqr
      421 pfscgicgks fsqrsaliph arsharekpf kcpecgkrfg qssvlaihar thlpgrtysc
      481 pdcgktfnrs stliqhqrsh tgerpyrcav cgkgfcrsst llqhhrvhsg erpykcddcg
      541 kafsqssdli rhqrthaagr r
//
LOCUS       XP_061009206             981 aa            linear   MAM 02-DEC-2023
DEFINITION  probable fibrosin-1 [Dama dama].
ACCESSION   XP_061009206
VERSION     XP_061009206.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153223.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..981
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..981
                     /product="probable fibrosin-1"
                     /calculated_mol_wt=103607
     Region          601..802
                     /region_name="Auts2"
                     /note="Autism susceptibility gene 2 protein; pfam15336"
                     /db_xref="CDD:464656"
     CDS             1..981
                     /gene="FBRS"
                     /coded_by="XM_061153223.1:1105..4050"
                     /db_xref="GeneID:133063626"
ORIGIN      
        1 metaaaaapg pgwategerr rrrcsrrdrd reqrrrrgpg gdaprallaa prgssssssp
       61 ppparpwssa ssgerpggpr rrrprprprp prprarkrpa gsgsrgeede eeeeggaddg
      121 eaeeepeeee eeeedlidgf aiasfaslea lqkdaslqpp erlehrmkhs gkrkrggssg
      181 atgepgdssd repgrpsgdr arkwpnkrrr keassrhsle agyicdaesd ldervsdddl
      241 dpsftvstsk asgphgafng nceaklsvvp kvsglersqe qppgpdpllv pfppkepppp
      301 paprppvspp aplpaapslp pppqpqlqlr vspfglrtsp ygssldlstg sssrpppkap
      361 appvaqppps ssssssssss assssaqlth rpptpslplp lsthsfpppg lrppppphhp
      421 slfspgptlp ppppllqvpg hpgasaanal seqdligqdl nsrylnaqgg pevvgaggsa
      481 rplafqfhqh nhqhqhthqh thqhftpypp gllpphgphm fekypgkmeg lfrhnpytaf
      541 ppavpglppg lppavsfgsl qgafqpkstn pelpprlgpv psglpqkgtq ipdhfrpplr
      601 kpgkwcamhv rvaymilrhq ekmkgdshkl dfrndllpcl pgpygalppg qelshsaasl
      661 ftatgavhaa anpftaapga hgpflspsth idpfgrptsf aslaalsnga fgglgsptfn
      721 sgavfaqkes pgappafasp pdpwgrlhrs plafpawvrp peaartpgsd kerpverrep
      781 sltkeekdrd lpfsrpqlrv spatpkarag eegarptkes vrvkeerkee aaaaaaaaaa
      841 aaaaaaaaat tgpqglhllf erprpppflg psppercagf leptwlagpp rlarpprfye
      901 ageeltgpga vaaarlygld pahpllysrl appppptaap gtphllsktp pgallgappp
      961 lvpaprpssp prapgparad r
//
LOCUS       XP_061009207             679 aa            linear   MAM 02-DEC-2023
DEFINITION  proline-rich protein 14 isoform X1 [Dama dama].
ACCESSION   XP_061009207
VERSION     XP_061009207.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153224.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..679
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..679
                     /product="proline-rich protein 14 isoform X1"
                     /calculated_mol_wt=73829
     Region          113..>300
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     Region          550..607
                     /region_name="Tantalus"
                     /note="Drosophila Tantalus-like; pfam15386"
                     /db_xref="CDD:464693"
     CDS             1..679
                     /gene="PRR14"
                     /coded_by="XM_061153224.1:145..2184"
                     /db_xref="GeneID:133063627"
ORIGIN      
        1 maavpnwllt prddgrqaas lsfspprktg tgdwavprgs kkkvfggwav lgkasfkgag
       61 ggsrrrpgic grrrlepgip qglpgaaasp mdlpgdsstp grqrlcrqpl agalwgaksp
      121 krpklqplga psplekasrr vlavvledvm aarmvplasq eenstpwhhs nrrdsvhsqp
      181 paspprqatw spqarppdpl hlcreplsrv hrppstprrr srttpgpeeg psqkvdqvhq
      241 ptlvvmlqdi assrpraegf adeapnfivp arraepkvmv hqskppskdl palshpsals
      301 vnplaspppa pdpvleppst pppssllrpr lspwglaplf hsvrsklesf adifltpnka
      361 prppppsppm klelkiaise agqsgaaegt vavsprppir qwrtqdqnpp apltkpslgr
      421 shscpdlgpp gpdpcswppv pappswprpr rhtvgggema kapppprpcl rkevfplggv
      481 ggspplvtsc sstastssfs epaeprlsst krkepraped qvlsdpetkt igkvsrfrir
      541 rtparsqinl tpmglprpvr lnkkefslee iytnknyqsp ttrrtfetif eeprerngtl
      601 iftssrklrr tvefrdsslp rsrrpsrgar aaagrtlppn lapspdvepl lqqrlqelda
      661 slleeeeeee gdqdrpyrt
//
LOCUS       XP_061009208             655 aa            linear   MAM 02-DEC-2023
DEFINITION  proline-rich protein 14 isoform X2 [Dama dama].
ACCESSION   XP_061009208
VERSION     XP_061009208.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153225.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..655
                     /product="proline-rich protein 14 isoform X2"
                     /calculated_mol_wt=71570
     Region          89..>276
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     Region          526..583
                     /region_name="Tantalus"
                     /note="Drosophila Tantalus-like; pfam15386"
                     /db_xref="CDD:464693"
     CDS             1..655
                     /gene="PRR14"
                     /coded_by="XM_061153225.1:160..2127"
                     /db_xref="GeneID:133063627"
ORIGIN      
        1 maavpnwllt prddgrqaas lsfspprktg tgdwavprgs kkkvfggwav lgkasfkgag
       61 ggsrrrpgic grrrtpgrqr lcrqplagal wgakspkrpk lqplgapspl ekasrrvlav
      121 vledvmaarm vplasqeens tpwhhsnrrd svhsqppasp prqatwspqa rppdplhlcr
      181 eplsrvhrpp stprrrsrtt pgpeegpsqk vdqvhqptlv vmlqdiassr praegfadea
      241 pnfivparra epkvmvhqsk ppskdlpals hpsalsvnpl aspppapdpv leppstppps
      301 sllrprlspw glaplfhsvr sklesfadif ltpnkaprpp ppsppmklel kiaiseagqs
      361 gaaegtvavs prppirqwrt qdqnppaplt kpslgrshsc pdlgppgpdp cswppvpapp
      421 swprprrhtv gggemakapp pprpclrkev fplggvggsp plvtscssta stssfsepae
      481 prlsstkrke prapedqvls dpetktigkv srfrirrtpa rsqinltpmg lprpvrlnkk
      541 efsleeiytn knyqspttrr tfetifeepr erngtlifts srklrrtvef rdsslprsrr
      601 psrgaraaag rtlppnlaps pdvepllqqr lqeldaslle eeeeeegdqd rpyrt
//
LOCUS       XP_061009209             589 aa            linear   MAM 02-DEC-2023
DEFINITION  proline-rich protein 14 isoform X3 [Dama dama].
ACCESSION   XP_061009209
VERSION     XP_061009209.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153226.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..589
                     /product="proline-rich protein 14 isoform X3"
                     /calculated_mol_wt=64539
     Region          23..>210
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     Region          460..517
                     /region_name="Tantalus"
                     /note="Drosophila Tantalus-like; pfam15386"
                     /db_xref="CDD:464693"
     CDS             1..589
                     /gene="PRR14"
                     /coded_by="XM_061153226.1:108..1877"
                     /db_xref="GeneID:133063627"
ORIGIN      
        1 mdlpgdsstp grqrlcrqpl agalwgaksp krpklqplga psplekasrr vlavvledvm
       61 aarmvplasq eenstpwhhs nrrdsvhsqp paspprqatw spqarppdpl hlcreplsrv
      121 hrppstprrr srttpgpeeg psqkvdqvhq ptlvvmlqdi assrpraegf adeapnfivp
      181 arraepkvmv hqskppskdl palshpsals vnplaspppa pdpvleppst pppssllrpr
      241 lspwglaplf hsvrsklesf adifltpnka prppppsppm klelkiaise agqsgaaegt
      301 vavsprppir qwrtqdqnpp apltkpslgr shscpdlgpp gpdpcswppv pappswprpr
      361 rhtvgggema kapppprpcl rkevfplggv ggspplvtsc sstastssfs epaeprlsst
      421 krkepraped qvlsdpetkt igkvsrfrir rtparsqinl tpmglprpvr lnkkefslee
      481 iytnknyqsp ttrrtfetif eeprerngtl iftssrklrr tvefrdsslp rsrrpsrgar
      541 aaagrtlppn lapspdvepl lqqrlqelda slleeeeeee gdqdrpyrt
//
LOCUS       XP_061009211             498 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 689 [Dama dama].
ACCESSION   XP_061009211
VERSION     XP_061009211.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153228.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..498
                     /product="zinc finger protein 689"
                     /calculated_mol_wt=56506
     Region          29..88
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          149..169
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          177..197
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(182,184,186,188..189,192..193,196,210,212,216..217,
                     220..221,224,238,240,242,244..245,248..249,252)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          202..>464
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          205..225
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(205,208,221,225)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          233..253
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          261..281
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(266,268,270,272..273,276..277,280,294,296,300..301,
                     304..305,308,322,324,326,328..329,332..333,336)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          289..309
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(289,292,305,309)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          317..337
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          345..365
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(345,348,361,365)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          373..393
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          401..421
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(401,404,417,421)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          429..449
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          457..477
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..498
                     /gene="ZNF689"
                     /coded_by="XM_061153228.1:340..1836"
                     /db_xref="GeneID:133063628"
ORIGIN      
        1 marpsallpa rgpgearpgr rrgrrpravk fgdvalyfsr eewgclrpaq ralyrdvmqe
       61 tyghlgalgc agpkpalisw lerntddwep aaldpqecpk gvavqrktrk kneekevfpp
      121 keaprkgkrg rrpskprlip rqtsggpicp dcgctfpdhl alqshkcaqn lkkpypcpdc
      181 grrfsypsll vshrrahsge cpyvcdqcgk rfsqrknlsq hqvihtgekp yhcpdcgrcf
      241 rrsrslanhr tthtgekphq cascgrrfay psllaihqrt htgekpytcl ecnrrfrqrt
      301 alvihqriht gekpypcpdc errfssssrl vshrrvhsge rpyacehcea rfsqrstllq
      361 hqllhtgekp ypcpdcgraf rrsgslaihr sthteeklha cddcgrrfay psllashrrv
      421 hsgerpyacd lcskrfaqws hlaqhqllht gekpfpclec grcfrqrwsl avhkcshgvq
      481 ncgprsaiga psqkgqal
//
LOCUS       XP_061009212             409 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 764 isoform X1 [Dama dama].
ACCESSION   XP_061009212
VERSION     XP_061009212.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153229.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..409
                     /product="zinc finger protein 764 isoform X1"
                     /calculated_mol_wt=44686
     Region          27..86
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          178..198
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <181..306
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          206..226
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(211,213,215,217..218,221..222,225,239,241,245..246,
                     249..250,253,267,269,271,273..274,277..278,281)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          234..254
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(234,237,250,254)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          262..282
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          290..310
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          302..327
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          318..338
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          334..353
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          346..366
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..409
                     /gene="ZNF764"
                     /coded_by="XM_061153229.1:350..1579"
                     /db_xref="GeneID:133063629"
ORIGIN      
        1 mmapppvplp arepnevgpq rgtsepvsfa dvavyfspee wgclqpaqra lyrdvmrety
       61 ghlgalgfrg tkpaliswve eeaemwgpda gppemgeclt eadtagsrnq pekgerggre
      121 algkilsvda qlpeltalkp lsagfpygcq qppkvprrgr pplsahppvp radrrhgcyv
      181 cgksfawrst lvehlythtg ekpfgcpdcg kgfsqassls khraihrger phrcpdcgra
      241 ftqrsaltth lrvhtgekpy rcadcgrcfs qssalyqhqr vhsgetpfpc pncgrafaha
      301 sdlrrhvrth tgekpyacpd cgrcfrqsse maahrrthsg erpyacpqcg rcfgqksama
      361 khqwvhrpga gvrrgggaag lpvslasarg dldppvgfqh ypeifqecg
//
LOCUS       XP_061009213             409 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 764 isoform X2 [Dama dama].
ACCESSION   XP_061009213
VERSION     XP_061009213.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153230.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..409
                     /product="zinc finger protein 764 isoform X2"
                     /calculated_mol_wt=44607
     Region          178..198
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <181..306
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          206..226
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(211,213,215,217..218,221..222,225,239,241,245..246,
                     249..250,253,267,269,271,273..274,277..278,281)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          234..254
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(234,237,250,254)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          262..282
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          290..310
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          302..327
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          318..338
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          334..353
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          346..366
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..409
                     /gene="ZNF764"
                     /coded_by="XM_061153230.1:493..1722"
                     /db_xref="GeneID:133063629"
ORIGIN      
        1 mssvnrlfpa vlegphykll pvawarrdpp ppctggrvar vspgrsvggr mtppwapsgv
       61 geerreegfr gtkpaliswv eeeaemwgpd agppemgecl teadtgsrnq pekgerggre
      121 algkilsvda qlpeltalkp lsagfpygcq qppkvprrgr pplsahppvp radrrhgcyv
      181 cgksfawrst lvehlythtg ekpfgcpdcg kgfsqassls khraihrger phrcpdcgra
      241 ftqrsaltth lrvhtgekpy rcadcgrcfs qssalyqhqr vhsgetpfpc pncgrafaha
      301 sdlrrhvrth tgekpyacpd cgrcfrqsse maahrrthsg erpyacpqcg rcfgqksama
      361 khqwvhrpga gvrrgggaag lpvslasarg dldppvgfqh ypeifqecg
//
LOCUS       XP_061009214             408 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 764 isoform X3 [Dama dama].
ACCESSION   XP_061009214
VERSION     XP_061009214.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153231.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..408
                     /product="zinc finger protein 764 isoform X3"
                     /calculated_mol_wt=44615
     Region          27..86
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          177..197
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <180..305
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          205..225
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(210,212,214,216..217,220..221,224,238,240,244..245,
                     248..249,252,266,268,270,272..273,276..277,280)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          233..253
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(233,236,249,253)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          261..281
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          289..309
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          301..326
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          317..337
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          333..352
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          345..365
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..408
                     /gene="ZNF764"
                     /coded_by="XM_061153231.1:350..1576"
                     /db_xref="GeneID:133063629"
ORIGIN      
        1 mmapppvplp arepnevgpq rgtsepvsfa dvavyfspee wgclqpaqra lyrdvmrety
       61 ghlgalgfrg tkpaliswve eeaemwgpda gppemgeclt eadtgsrnqp ekgerggrea
      121 lgkilsvdaq lpeltalkpl sagfpygcqq ppkvprrgrp plsahppvpr adrrhgcyvc
      181 gksfawrstl vehlythtge kpfgcpdcgk gfsqasslsk hraihrgerp hrcpdcgraf
      241 tqrsaltthl rvhtgekpyr cadcgrcfsq ssalyqhqrv hsgetpfpcp ncgrafahas
      301 dlrrhvrtht gekpyacpdc grcfrqssem aahrrthsge rpyacpqcgr cfgqksamak
      361 hqwvhrpgag vrrgggaagl pvslasargd ldppvgfqhy peifqecg
//
LOCUS       XP_061009215             276 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 688 isoform X1 [Dama dama].
ACCESSION   XP_061009215
VERSION     XP_061009215.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153232.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..276
                     /product="zinc finger protein 688 isoform X1"
                     /calculated_mol_wt=30092
     Region          26..86
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          183..205
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          185..205
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(185,188,201,205)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          198..222
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          213..233
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..276
                     /gene="ZNF688"
                     /coded_by="XM_061153232.1:321..1151"
                     /db_xref="GeneID:133063630"
ORIGIN      
        1 mapppapllv lrpgetgpgc kkllavrfad vavyfspeew gcllpaqral yrdvmretyg
       61 hlgalgfpgp kpaliswmeq eseawspaaq dpeegeslgg alrgatpnkr eeepeaglga
      121 kaprkapgke rpeelvkhsp gttvsktsar aqppkqaawd qgagpqppap lpsadaqasq
      181 rrhvcadcgr rftypsllvs hrrmhsgerp fpcpecgmrf krkfaveahq wihrscsggr
      241 rgrrpgirav prapvrgdrd ppvlfrhypd ifeecg
//
LOCUS       XP_061009216             238 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 688 isoform X2 [Dama dama].
ACCESSION   XP_061009216
VERSION     XP_061009216.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153233.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..238
                     /product="zinc finger protein 688 isoform X2"
                     /calculated_mol_wt=26084
     Region          26..77
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          145..167
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          147..167
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(147,150,163,167)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          160..184
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          175..195
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..238
                     /gene="ZNF688"
                     /coded_by="XM_061153233.1:321..1037"
                     /db_xref="GeneID:133063630"
ORIGIN      
        1 mapppapllv lrpgetgpgc kkllavrfad vavyfspeew gcllpaqral yrdvmretyg
       61 hlgalgatpn kreeepeagl gakaprkapg kerpeelvkh spgttvskts araqppkqaa
      121 wdqgagpqpp aplpsadaqa sqrrhvcadc grrftypsll vshrrmhsge rpfpcpecgm
      181 rfkrkfavea hqwihrscsg grrgrrpgir avprapvrgd rdppvlfrhy pdifeecg
//
LOCUS       XP_061009217             114 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein P1-like [Dama dama].
ACCESSION   XP_061009217
VERSION     XP_061009217.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153234.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..114
                     /product="large ribosomal subunit protein P1-like"
                     /calculated_mol_wt=11482
     Region          6..>63
                     /region_name="Ribosomal_P1"
                     /note="Ribosomal protein P1. This subfamily represents the
                     eukaryotic large ribosomal protein P1. Eukaryotic P1 and
                     P2 are functionally equivalent to the bacterial protein
                     L7/L12, but are not homologous to L7/L12. P1 is located in
                     the L12 stalk, with proteins...; cd05831"
                     /db_xref="CDD:100109"
     CDS             1..114
                     /gene="LOC133063631"
                     /coded_by="XM_061153234.1:39..383"
                     /db_xref="GeneID:133063631"
ORIGIN      
        1 masvselaci ysalilhdde vtvtedkina likaagvnve pfwpglfaka lanvnigsli
       61 cnvgaggpap aagaalagrp apataaapae ekkveakkee seesdddmgf glfd
//
LOCUS       XP_061009218            3240 aa            linear   MAM 02-DEC-2023
DEFINITION  helicase SRCAP isoform X1 [Dama dama].
ACCESSION   XP_061009218
VERSION     XP_061009218.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153235.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3240
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3240
                     /product="helicase SRCAP isoform X1"
                     /calculated_mol_wt=344722
     Region          88..>228
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     Region          127..193
                     /region_name="HSA"
                     /note="HSA domain; pfam07529"
                     /db_xref="CDD:462194"
     Region          392..>915
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
     Region          624..846
                     /region_name="DEXQc_SRCAP"
                     /note="DEXH/Q-box helicase domain of SRCAP; cd18003"
                     /db_xref="CDD:350761"
     Site            order(651..657,691,752..753)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350761"
     Region          <1037..1521
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1349..1858
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          2040..2175
                     /region_name="SF2_C_SNF"
                     /note="C-terminal helicase domain of the SNF family
                     helicases; cd18793"
                     /db_xref="CDD:350180"
     Site            order(2076..2077,2085,2127,2148..2149)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350180"
     Site            order(2133..2134,2136,2159,2162)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350180"
     Region          2249..>2370
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     Region          <2408..2813
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..3240
                     /gene="SRCAP"
                     /coded_by="XM_061153235.1:424..10146"
                     /db_xref="GeneID:133063632"
ORIGIN      
        1 mqscpspahp qlpilqtqmv sdgmtgsnpv spasssspas sgaggispqh iaqdssldgp
       61 pgppdgatvp leglslpqpa dlanrgpkwe kshaeiaeqa kheaeietri aelrkegfws
      121 lkrlpkvpep prpkghwdyl ceemqwlsad faqerrwkrg varkvvrmvi rhheeqrqke
      181 erarreeqak lrriasamak dvrqfwsnve kvvqfkqqsr leekrkkald lhldfivgqt
      241 ekysdllsqs lnqplasska gsspclgsss aassppppgs rmddedgdfq pqeeeeedde
      301 etieveeqqe gndaetqrre iellrregel pleellrslp pqllggpssp srtpsshdsd
      361 trdgpeegge eepsqvlkvk pppsvtqrnk qpwhpdedde eftanedeae deedtiaaee
      421 qlegevdham elselarege lsmeellqqy agayasdasa pgsgsseeed edeveanssd
      481 cepegateae ealqedsssq sdsaeeqsed edeehseeee tsessesees eseeseesqs
      541 qsqadeeeee dddfgveyll ardeeqsead ggsgpptpgp tttlgpkkei tdiaaaaesl
      601 qpkgytlatt qvktpiplll rgqlreyqhi gldwlvtmye kklngilade mglgktiqti
      661 sllahlacek gnwgphliiv ptsvmlnwem elkrwcpsfk iltyygaqke rklkrqgwtk
      721 pnafhvcits yklvlqdhqa frrknwryli ldeaqniknf ksqrwqslln fnsqrrlllt
      781 gtplqnslme lwslmhflmp hvfqshrefk ewfsnpltgm iegsqeyneg lvkrlhkvlr
      841 pfllrrvkvd vekqmpkkye hvircrlskr qrclyddfma qtttketlat ghfmsvinil
      901 mqlrkvcnhp nlfdprpvts pfitpgicfs taslvlratd vhplqridmg rfdliglegr
      961 vsryeadtfl pqyrlsrrvl levatapdpp prpkpvkmkv nrmlqpvpkq egrtvvvvns
     1021 prtplgpvpv rpppvpelsa qpspgltppv lpaplmvsas psgpplipas rppgpvllpp
     1081 lqpnsgplpq vlpsplgvls gtsrpptptl slkpappapv rlspapppgs snllkpltvp
     1141 pgytfpnaav tttstttvta pttavpapta pqrlilspdm qarlpsgevv sigqlasltq
     1201 rpvastggsk pltfqiqgnk ltltgaqvrq lavgqprplq rnvvhlvsag gqhhlisqpa
     1261 hvaliqavap tpgptpvsvl psstpsttpa ptglslplaa nqvpptmvnn tgvvkivvrq
     1321 aprdgltpvp plapaprpps sglpavltpr ptltpgrlst pslgtarapi ptstlvrpll
     1381 klvhspspev sasapgaapl tissplpvps slpgpasspv pvpnssplas pvsstvsvpv
     1441 ssslpisvst tlpspasapl tipisaplpv sasgptlltn vtpalapvvs aapgppslap
     1501 vgaspsasal tlglastpsl spsqapghpl llapasshvp glnsavapac spvlvpasal
     1561 aspfpatpnp apaqasllap aptasqalat slapmvapqt ailapspapp laplpvlaps
     1621 pgptsvlass qtsvpvlass stpgtplapa sslgpapaaa lapssaqtvv papvpsplps
     1681 lastqtlalp palastlggs spsqtlslgt gnpqnpfpaq tlsltpassl vpapaqtlsm
     1741 apgpplgpsq tlslapaptl apvspmgpap ahtltlapvs ssasllapas vqtltlspaq
     1801 vavptlgpaa aqtlalapas tqspasqass lvvsasgaap lpvtmvsrlp vskdepetlt
     1861 lrsgppspps tatsfsgprp rrqppppprs pfyldsleek rkrqrserle rifqlseahg
     1921 alapvygtev ldfctlpqpv aspigprspg pshptfwtyt eaarqavlfp qqrldqlsei
     1981 ierfifvmpp veapppslha chpppwlapr qaafqeqlah elwprarplh rivcnmrtqf
     2041 pdlrliqydc gklqtlavll rqlkaeghrv liftqmtrml dvleqfltyh ghlylrldgs
     2101 trveqrqalm erfnadkrif cfilstrsgg vgvnltgadt vvfydsdwnp tmdaqaqdrc
     2161 hrigqtrdvh iyrlisertv eenilkkanq krmlgdmaie ggnfttayfk qqtirelfdm
     2221 pleepsgssv psapddeeet vaskqthile qalcraedee diraatqaka eqvaelaefn
     2281 endgfpageg eeagrpgaed eemsraeqei aalveqltpi eryamkflea sleevsreel
     2341 kqaeeqveaa rkdldqakee vfrlpqeeee gpgagdevsc gtgggshrrs kkakaperpg
     2401 trvserlrga raetqganht pvpsthhtrs tstpprcspa rervprpapr prpppasapa
     2461 aipapipvpi sapipisapn pvtmlpvhil pspplpsaqi ppscssactp ppactpppaq
     2521 tpppaqtsll tpssplllgl psvpisppvt nlplglgpea elcaqamast esleladmas
     2581 setspvtlvp pkdllpvave ilpvseknls ltssapsptl aagsvpngqe qevpepaeat
     2641 ilsvlpdgee mpsclsennk lelppsaasd ellpepletd knseelveaq tptstpekpq
     2701 elvsaeatap stsssatstp egssparppr rrtsadieir gqgagrpgqp pgpkvlrklp
     2761 grlvtvveek elvrrrrqqr gtastlvpgv setgtspgsp sarsmlgpes spptscpcev
     2821 appstlptpt qqpfiarrri elgvtgggss engegallai tppavkrrrg rppkknrspv
     2881 dagrgvdeap sstskgktng adpvpgaetl ivaepvlspq lipgpqplgp qpvhrpepii
     2941 lspvekrrrg rppkardlpl pgttsspgdg nlesrtqplp lppplpplps llscptatva
     3001 ntvttlsist sppkrkrgrp pknppsprps qlpvldrdss svlescglgk qrqpqgqges
     3061 egsssdedgs rpltrlarlr leaegmrgrk segsmvvavi qddldladsg pggleltspv
     3121 vslapklrst rlrpgslvpp letekvprkr agapvssgpg lakrsrlqpp splgpegsve
     3181 eseaeasgee eegdgtsrrr pgprrlggat tqgdqrilrs sapphlagpt ishrgrkakt
//
LOCUS       XP_061009220            3240 aa            linear   MAM 02-DEC-2023
DEFINITION  helicase SRCAP isoform X1 [Dama dama].
ACCESSION   XP_061009220
VERSION     XP_061009220.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153237.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3240
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3240
                     /product="helicase SRCAP isoform X1"
                     /calculated_mol_wt=344722
     Region          88..>228
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     Region          127..193
                     /region_name="HSA"
                     /note="HSA domain; pfam07529"
                     /db_xref="CDD:462194"
     Region          392..>915
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
     Region          624..846
                     /region_name="DEXQc_SRCAP"
                     /note="DEXH/Q-box helicase domain of SRCAP; cd18003"
                     /db_xref="CDD:350761"
     Site            order(651..657,691,752..753)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350761"
     Region          <1037..1521
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1349..1858
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          2040..2175
                     /region_name="SF2_C_SNF"
                     /note="C-terminal helicase domain of the SNF family
                     helicases; cd18793"
                     /db_xref="CDD:350180"
     Site            order(2076..2077,2085,2127,2148..2149)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350180"
     Site            order(2133..2134,2136,2159,2162)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350180"
     Region          2249..>2370
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     Region          <2408..2813
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..3240
                     /gene="SRCAP"
                     /coded_by="XM_061153237.1:549..10271"
                     /db_xref="GeneID:133063632"
ORIGIN      
        1 mqscpspahp qlpilqtqmv sdgmtgsnpv spasssspas sgaggispqh iaqdssldgp
       61 pgppdgatvp leglslpqpa dlanrgpkwe kshaeiaeqa kheaeietri aelrkegfws
      121 lkrlpkvpep prpkghwdyl ceemqwlsad faqerrwkrg varkvvrmvi rhheeqrqke
      181 erarreeqak lrriasamak dvrqfwsnve kvvqfkqqsr leekrkkald lhldfivgqt
      241 ekysdllsqs lnqplasska gsspclgsss aassppppgs rmddedgdfq pqeeeeedde
      301 etieveeqqe gndaetqrre iellrregel pleellrslp pqllggpssp srtpsshdsd
      361 trdgpeegge eepsqvlkvk pppsvtqrnk qpwhpdedde eftanedeae deedtiaaee
      421 qlegevdham elselarege lsmeellqqy agayasdasa pgsgsseeed edeveanssd
      481 cepegateae ealqedsssq sdsaeeqsed edeehseeee tsessesees eseeseesqs
      541 qsqadeeeee dddfgveyll ardeeqsead ggsgpptpgp tttlgpkkei tdiaaaaesl
      601 qpkgytlatt qvktpiplll rgqlreyqhi gldwlvtmye kklngilade mglgktiqti
      661 sllahlacek gnwgphliiv ptsvmlnwem elkrwcpsfk iltyygaqke rklkrqgwtk
      721 pnafhvcits yklvlqdhqa frrknwryli ldeaqniknf ksqrwqslln fnsqrrlllt
      781 gtplqnslme lwslmhflmp hvfqshrefk ewfsnpltgm iegsqeyneg lvkrlhkvlr
      841 pfllrrvkvd vekqmpkkye hvircrlskr qrclyddfma qtttketlat ghfmsvinil
      901 mqlrkvcnhp nlfdprpvts pfitpgicfs taslvlratd vhplqridmg rfdliglegr
      961 vsryeadtfl pqyrlsrrvl levatapdpp prpkpvkmkv nrmlqpvpkq egrtvvvvns
     1021 prtplgpvpv rpppvpelsa qpspgltppv lpaplmvsas psgpplipas rppgpvllpp
     1081 lqpnsgplpq vlpsplgvls gtsrpptptl slkpappapv rlspapppgs snllkpltvp
     1141 pgytfpnaav tttstttvta pttavpapta pqrlilspdm qarlpsgevv sigqlasltq
     1201 rpvastggsk pltfqiqgnk ltltgaqvrq lavgqprplq rnvvhlvsag gqhhlisqpa
     1261 hvaliqavap tpgptpvsvl psstpsttpa ptglslplaa nqvpptmvnn tgvvkivvrq
     1321 aprdgltpvp plapaprpps sglpavltpr ptltpgrlst pslgtarapi ptstlvrpll
     1381 klvhspspev sasapgaapl tissplpvps slpgpasspv pvpnssplas pvsstvsvpv
     1441 ssslpisvst tlpspasapl tipisaplpv sasgptlltn vtpalapvvs aapgppslap
     1501 vgaspsasal tlglastpsl spsqapghpl llapasshvp glnsavapac spvlvpasal
     1561 aspfpatpnp apaqasllap aptasqalat slapmvapqt ailapspapp laplpvlaps
     1621 pgptsvlass qtsvpvlass stpgtplapa sslgpapaaa lapssaqtvv papvpsplps
     1681 lastqtlalp palastlggs spsqtlslgt gnpqnpfpaq tlsltpassl vpapaqtlsm
     1741 apgpplgpsq tlslapaptl apvspmgpap ahtltlapvs ssasllapas vqtltlspaq
     1801 vavptlgpaa aqtlalapas tqspasqass lvvsasgaap lpvtmvsrlp vskdepetlt
     1861 lrsgppspps tatsfsgprp rrqppppprs pfyldsleek rkrqrserle rifqlseahg
     1921 alapvygtev ldfctlpqpv aspigprspg pshptfwtyt eaarqavlfp qqrldqlsei
     1981 ierfifvmpp veapppslha chpppwlapr qaafqeqlah elwprarplh rivcnmrtqf
     2041 pdlrliqydc gklqtlavll rqlkaeghrv liftqmtrml dvleqfltyh ghlylrldgs
     2101 trveqrqalm erfnadkrif cfilstrsgg vgvnltgadt vvfydsdwnp tmdaqaqdrc
     2161 hrigqtrdvh iyrlisertv eenilkkanq krmlgdmaie ggnfttayfk qqtirelfdm
     2221 pleepsgssv psapddeeet vaskqthile qalcraedee diraatqaka eqvaelaefn
     2281 endgfpageg eeagrpgaed eemsraeqei aalveqltpi eryamkflea sleevsreel
     2341 kqaeeqveaa rkdldqakee vfrlpqeeee gpgagdevsc gtgggshrrs kkakaperpg
     2401 trvserlrga raetqganht pvpsthhtrs tstpprcspa rervprpapr prpppasapa
     2461 aipapipvpi sapipisapn pvtmlpvhil pspplpsaqi ppscssactp ppactpppaq
     2521 tpppaqtsll tpssplllgl psvpisppvt nlplglgpea elcaqamast esleladmas
     2581 setspvtlvp pkdllpvave ilpvseknls ltssapsptl aagsvpngqe qevpepaeat
     2641 ilsvlpdgee mpsclsennk lelppsaasd ellpepletd knseelveaq tptstpekpq
     2701 elvsaeatap stsssatstp egssparppr rrtsadieir gqgagrpgqp pgpkvlrklp
     2761 grlvtvveek elvrrrrqqr gtastlvpgv setgtspgsp sarsmlgpes spptscpcev
     2821 appstlptpt qqpfiarrri elgvtgggss engegallai tppavkrrrg rppkknrspv
     2881 dagrgvdeap sstskgktng adpvpgaetl ivaepvlspq lipgpqplgp qpvhrpepii
     2941 lspvekrrrg rppkardlpl pgttsspgdg nlesrtqplp lppplpplps llscptatva
     3001 ntvttlsist sppkrkrgrp pknppsprps qlpvldrdss svlescglgk qrqpqgqges
     3061 egsssdedgs rpltrlarlr leaegmrgrk segsmvvavi qddldladsg pggleltspv
     3121 vslapklrst rlrpgslvpp letekvprkr agapvssgpg lakrsrlqpp splgpegsve
     3181 eseaeasgee eegdgtsrrr pgprrlggat tqgdqrilrs sapphlagpt ishrgrkakt
//
LOCUS       XP_061009221            3240 aa            linear   MAM 02-DEC-2023
DEFINITION  helicase SRCAP isoform X1 [Dama dama].
ACCESSION   XP_061009221
VERSION     XP_061009221.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153238.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3240
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3240
                     /product="helicase SRCAP isoform X1"
                     /calculated_mol_wt=344722
     Region          88..>228
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     Region          127..193
                     /region_name="HSA"
                     /note="HSA domain; pfam07529"
                     /db_xref="CDD:462194"
     Region          392..>915
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
     Region          624..846
                     /region_name="DEXQc_SRCAP"
                     /note="DEXH/Q-box helicase domain of SRCAP; cd18003"
                     /db_xref="CDD:350761"
     Site            order(651..657,691,752..753)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350761"
     Region          <1037..1521
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1349..1858
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          2040..2175
                     /region_name="SF2_C_SNF"
                     /note="C-terminal helicase domain of the SNF family
                     helicases; cd18793"
                     /db_xref="CDD:350180"
     Site            order(2076..2077,2085,2127,2148..2149)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350180"
     Site            order(2133..2134,2136,2159,2162)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350180"
     Region          2249..>2370
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     Region          <2408..2813
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..3240
                     /gene="SRCAP"
                     /coded_by="XM_061153238.1:453..10175"
                     /db_xref="GeneID:133063632"
ORIGIN      
        1 mqscpspahp qlpilqtqmv sdgmtgsnpv spasssspas sgaggispqh iaqdssldgp
       61 pgppdgatvp leglslpqpa dlanrgpkwe kshaeiaeqa kheaeietri aelrkegfws
      121 lkrlpkvpep prpkghwdyl ceemqwlsad faqerrwkrg varkvvrmvi rhheeqrqke
      181 erarreeqak lrriasamak dvrqfwsnve kvvqfkqqsr leekrkkald lhldfivgqt
      241 ekysdllsqs lnqplasska gsspclgsss aassppppgs rmddedgdfq pqeeeeedde
      301 etieveeqqe gndaetqrre iellrregel pleellrslp pqllggpssp srtpsshdsd
      361 trdgpeegge eepsqvlkvk pppsvtqrnk qpwhpdedde eftanedeae deedtiaaee
      421 qlegevdham elselarege lsmeellqqy agayasdasa pgsgsseeed edeveanssd
      481 cepegateae ealqedsssq sdsaeeqsed edeehseeee tsessesees eseeseesqs
      541 qsqadeeeee dddfgveyll ardeeqsead ggsgpptpgp tttlgpkkei tdiaaaaesl
      601 qpkgytlatt qvktpiplll rgqlreyqhi gldwlvtmye kklngilade mglgktiqti
      661 sllahlacek gnwgphliiv ptsvmlnwem elkrwcpsfk iltyygaqke rklkrqgwtk
      721 pnafhvcits yklvlqdhqa frrknwryli ldeaqniknf ksqrwqslln fnsqrrlllt
      781 gtplqnslme lwslmhflmp hvfqshrefk ewfsnpltgm iegsqeyneg lvkrlhkvlr
      841 pfllrrvkvd vekqmpkkye hvircrlskr qrclyddfma qtttketlat ghfmsvinil
      901 mqlrkvcnhp nlfdprpvts pfitpgicfs taslvlratd vhplqridmg rfdliglegr
      961 vsryeadtfl pqyrlsrrvl levatapdpp prpkpvkmkv nrmlqpvpkq egrtvvvvns
     1021 prtplgpvpv rpppvpelsa qpspgltppv lpaplmvsas psgpplipas rppgpvllpp
     1081 lqpnsgplpq vlpsplgvls gtsrpptptl slkpappapv rlspapppgs snllkpltvp
     1141 pgytfpnaav tttstttvta pttavpapta pqrlilspdm qarlpsgevv sigqlasltq
     1201 rpvastggsk pltfqiqgnk ltltgaqvrq lavgqprplq rnvvhlvsag gqhhlisqpa
     1261 hvaliqavap tpgptpvsvl psstpsttpa ptglslplaa nqvpptmvnn tgvvkivvrq
     1321 aprdgltpvp plapaprpps sglpavltpr ptltpgrlst pslgtarapi ptstlvrpll
     1381 klvhspspev sasapgaapl tissplpvps slpgpasspv pvpnssplas pvsstvsvpv
     1441 ssslpisvst tlpspasapl tipisaplpv sasgptlltn vtpalapvvs aapgppslap
     1501 vgaspsasal tlglastpsl spsqapghpl llapasshvp glnsavapac spvlvpasal
     1561 aspfpatpnp apaqasllap aptasqalat slapmvapqt ailapspapp laplpvlaps
     1621 pgptsvlass qtsvpvlass stpgtplapa sslgpapaaa lapssaqtvv papvpsplps
     1681 lastqtlalp palastlggs spsqtlslgt gnpqnpfpaq tlsltpassl vpapaqtlsm
     1741 apgpplgpsq tlslapaptl apvspmgpap ahtltlapvs ssasllapas vqtltlspaq
     1801 vavptlgpaa aqtlalapas tqspasqass lvvsasgaap lpvtmvsrlp vskdepetlt
     1861 lrsgppspps tatsfsgprp rrqppppprs pfyldsleek rkrqrserle rifqlseahg
     1921 alapvygtev ldfctlpqpv aspigprspg pshptfwtyt eaarqavlfp qqrldqlsei
     1981 ierfifvmpp veapppslha chpppwlapr qaafqeqlah elwprarplh rivcnmrtqf
     2041 pdlrliqydc gklqtlavll rqlkaeghrv liftqmtrml dvleqfltyh ghlylrldgs
     2101 trveqrqalm erfnadkrif cfilstrsgg vgvnltgadt vvfydsdwnp tmdaqaqdrc
     2161 hrigqtrdvh iyrlisertv eenilkkanq krmlgdmaie ggnfttayfk qqtirelfdm
     2221 pleepsgssv psapddeeet vaskqthile qalcraedee diraatqaka eqvaelaefn
     2281 endgfpageg eeagrpgaed eemsraeqei aalveqltpi eryamkflea sleevsreel
     2341 kqaeeqveaa rkdldqakee vfrlpqeeee gpgagdevsc gtgggshrrs kkakaperpg
     2401 trvserlrga raetqganht pvpsthhtrs tstpprcspa rervprpapr prpppasapa
     2461 aipapipvpi sapipisapn pvtmlpvhil pspplpsaqi ppscssactp ppactpppaq
     2521 tpppaqtsll tpssplllgl psvpisppvt nlplglgpea elcaqamast esleladmas
     2581 setspvtlvp pkdllpvave ilpvseknls ltssapsptl aagsvpngqe qevpepaeat
     2641 ilsvlpdgee mpsclsennk lelppsaasd ellpepletd knseelveaq tptstpekpq
     2701 elvsaeatap stsssatstp egssparppr rrtsadieir gqgagrpgqp pgpkvlrklp
     2761 grlvtvveek elvrrrrqqr gtastlvpgv setgtspgsp sarsmlgpes spptscpcev
     2821 appstlptpt qqpfiarrri elgvtgggss engegallai tppavkrrrg rppkknrspv
     2881 dagrgvdeap sstskgktng adpvpgaetl ivaepvlspq lipgpqplgp qpvhrpepii
     2941 lspvekrrrg rppkardlpl pgttsspgdg nlesrtqplp lppplpplps llscptatva
     3001 ntvttlsist sppkrkrgrp pknppsprps qlpvldrdss svlescglgk qrqpqgqges
     3061 egsssdedgs rpltrlarlr leaegmrgrk segsmvvavi qddldladsg pggleltspv
     3121 vslapklrst rlrpgslvpp letekvprkr agapvssgpg lakrsrlqpp splgpegsve
     3181 eseaeasgee eegdgtsrrr pgprrlggat tqgdqrilrs sapphlagpt ishrgrkakt
//
LOCUS       XP_061009222            3240 aa            linear   MAM 02-DEC-2023
DEFINITION  helicase SRCAP isoform X1 [Dama dama].
ACCESSION   XP_061009222
VERSION     XP_061009222.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153239.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3240
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3240
                     /product="helicase SRCAP isoform X1"
                     /calculated_mol_wt=344722
     Region          88..>228
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     Region          127..193
                     /region_name="HSA"
                     /note="HSA domain; pfam07529"
                     /db_xref="CDD:462194"
     Region          392..>915
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
     Region          624..846
                     /region_name="DEXQc_SRCAP"
                     /note="DEXH/Q-box helicase domain of SRCAP; cd18003"
                     /db_xref="CDD:350761"
     Site            order(651..657,691,752..753)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350761"
     Region          <1037..1521
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1349..1858
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          2040..2175
                     /region_name="SF2_C_SNF"
                     /note="C-terminal helicase domain of the SNF family
                     helicases; cd18793"
                     /db_xref="CDD:350180"
     Site            order(2076..2077,2085,2127,2148..2149)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350180"
     Site            order(2133..2134,2136,2159,2162)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350180"
     Region          2249..>2370
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     Region          <2408..2813
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..3240
                     /gene="SRCAP"
                     /coded_by="XM_061153239.1:350..10072"
                     /db_xref="GeneID:133063632"
ORIGIN      
        1 mqscpspahp qlpilqtqmv sdgmtgsnpv spasssspas sgaggispqh iaqdssldgp
       61 pgppdgatvp leglslpqpa dlanrgpkwe kshaeiaeqa kheaeietri aelrkegfws
      121 lkrlpkvpep prpkghwdyl ceemqwlsad faqerrwkrg varkvvrmvi rhheeqrqke
      181 erarreeqak lrriasamak dvrqfwsnve kvvqfkqqsr leekrkkald lhldfivgqt
      241 ekysdllsqs lnqplasska gsspclgsss aassppppgs rmddedgdfq pqeeeeedde
      301 etieveeqqe gndaetqrre iellrregel pleellrslp pqllggpssp srtpsshdsd
      361 trdgpeegge eepsqvlkvk pppsvtqrnk qpwhpdedde eftanedeae deedtiaaee
      421 qlegevdham elselarege lsmeellqqy agayasdasa pgsgsseeed edeveanssd
      481 cepegateae ealqedsssq sdsaeeqsed edeehseeee tsessesees eseeseesqs
      541 qsqadeeeee dddfgveyll ardeeqsead ggsgpptpgp tttlgpkkei tdiaaaaesl
      601 qpkgytlatt qvktpiplll rgqlreyqhi gldwlvtmye kklngilade mglgktiqti
      661 sllahlacek gnwgphliiv ptsvmlnwem elkrwcpsfk iltyygaqke rklkrqgwtk
      721 pnafhvcits yklvlqdhqa frrknwryli ldeaqniknf ksqrwqslln fnsqrrlllt
      781 gtplqnslme lwslmhflmp hvfqshrefk ewfsnpltgm iegsqeyneg lvkrlhkvlr
      841 pfllrrvkvd vekqmpkkye hvircrlskr qrclyddfma qtttketlat ghfmsvinil
      901 mqlrkvcnhp nlfdprpvts pfitpgicfs taslvlratd vhplqridmg rfdliglegr
      961 vsryeadtfl pqyrlsrrvl levatapdpp prpkpvkmkv nrmlqpvpkq egrtvvvvns
     1021 prtplgpvpv rpppvpelsa qpspgltppv lpaplmvsas psgpplipas rppgpvllpp
     1081 lqpnsgplpq vlpsplgvls gtsrpptptl slkpappapv rlspapppgs snllkpltvp
     1141 pgytfpnaav tttstttvta pttavpapta pqrlilspdm qarlpsgevv sigqlasltq
     1201 rpvastggsk pltfqiqgnk ltltgaqvrq lavgqprplq rnvvhlvsag gqhhlisqpa
     1261 hvaliqavap tpgptpvsvl psstpsttpa ptglslplaa nqvpptmvnn tgvvkivvrq
     1321 aprdgltpvp plapaprpps sglpavltpr ptltpgrlst pslgtarapi ptstlvrpll
     1381 klvhspspev sasapgaapl tissplpvps slpgpasspv pvpnssplas pvsstvsvpv
     1441 ssslpisvst tlpspasapl tipisaplpv sasgptlltn vtpalapvvs aapgppslap
     1501 vgaspsasal tlglastpsl spsqapghpl llapasshvp glnsavapac spvlvpasal
     1561 aspfpatpnp apaqasllap aptasqalat slapmvapqt ailapspapp laplpvlaps
     1621 pgptsvlass qtsvpvlass stpgtplapa sslgpapaaa lapssaqtvv papvpsplps
     1681 lastqtlalp palastlggs spsqtlslgt gnpqnpfpaq tlsltpassl vpapaqtlsm
     1741 apgpplgpsq tlslapaptl apvspmgpap ahtltlapvs ssasllapas vqtltlspaq
     1801 vavptlgpaa aqtlalapas tqspasqass lvvsasgaap lpvtmvsrlp vskdepetlt
     1861 lrsgppspps tatsfsgprp rrqppppprs pfyldsleek rkrqrserle rifqlseahg
     1921 alapvygtev ldfctlpqpv aspigprspg pshptfwtyt eaarqavlfp qqrldqlsei
     1981 ierfifvmpp veapppslha chpppwlapr qaafqeqlah elwprarplh rivcnmrtqf
     2041 pdlrliqydc gklqtlavll rqlkaeghrv liftqmtrml dvleqfltyh ghlylrldgs
     2101 trveqrqalm erfnadkrif cfilstrsgg vgvnltgadt vvfydsdwnp tmdaqaqdrc
     2161 hrigqtrdvh iyrlisertv eenilkkanq krmlgdmaie ggnfttayfk qqtirelfdm
     2221 pleepsgssv psapddeeet vaskqthile qalcraedee diraatqaka eqvaelaefn
     2281 endgfpageg eeagrpgaed eemsraeqei aalveqltpi eryamkflea sleevsreel
     2341 kqaeeqveaa rkdldqakee vfrlpqeeee gpgagdevsc gtgggshrrs kkakaperpg
     2401 trvserlrga raetqganht pvpsthhtrs tstpprcspa rervprpapr prpppasapa
     2461 aipapipvpi sapipisapn pvtmlpvhil pspplpsaqi ppscssactp ppactpppaq
     2521 tpppaqtsll tpssplllgl psvpisppvt nlplglgpea elcaqamast esleladmas
     2581 setspvtlvp pkdllpvave ilpvseknls ltssapsptl aagsvpngqe qevpepaeat
     2641 ilsvlpdgee mpsclsennk lelppsaasd ellpepletd knseelveaq tptstpekpq
     2701 elvsaeatap stsssatstp egssparppr rrtsadieir gqgagrpgqp pgpkvlrklp
     2761 grlvtvveek elvrrrrqqr gtastlvpgv setgtspgsp sarsmlgpes spptscpcev
     2821 appstlptpt qqpfiarrri elgvtgggss engegallai tppavkrrrg rppkknrspv
     2881 dagrgvdeap sstskgktng adpvpgaetl ivaepvlspq lipgpqplgp qpvhrpepii
     2941 lspvekrrrg rppkardlpl pgttsspgdg nlesrtqplp lppplpplps llscptatva
     3001 ntvttlsist sppkrkrgrp pknppsprps qlpvldrdss svlescglgk qrqpqgqges
     3061 egsssdedgs rpltrlarlr leaegmrgrk segsmvvavi qddldladsg pggleltspv
     3121 vslapklrst rlrpgslvpp letekvprkr agapvssgpg lakrsrlqpp splgpegsve
     3181 eseaeasgee eegdgtsrrr pgprrlggat tqgdqrilrs sapphlagpt ishrgrkakt
//
LOCUS       XP_061009223            3240 aa            linear   MAM 02-DEC-2023
DEFINITION  helicase SRCAP isoform X1 [Dama dama].
ACCESSION   XP_061009223
VERSION     XP_061009223.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153240.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3240
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3240
                     /product="helicase SRCAP isoform X1"
                     /calculated_mol_wt=344722
     Region          88..>228
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     Region          127..193
                     /region_name="HSA"
                     /note="HSA domain; pfam07529"
                     /db_xref="CDD:462194"
     Region          392..>915
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
     Region          624..846
                     /region_name="DEXQc_SRCAP"
                     /note="DEXH/Q-box helicase domain of SRCAP; cd18003"
                     /db_xref="CDD:350761"
     Site            order(651..657,691,752..753)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350761"
     Region          <1037..1521
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1349..1858
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          2040..2175
                     /region_name="SF2_C_SNF"
                     /note="C-terminal helicase domain of the SNF family
                     helicases; cd18793"
                     /db_xref="CDD:350180"
     Site            order(2076..2077,2085,2127,2148..2149)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350180"
     Site            order(2133..2134,2136,2159,2162)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350180"
     Region          2249..>2370
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     Region          <2408..2813
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..3240
                     /gene="SRCAP"
                     /coded_by="XM_061153240.1:578..10300"
                     /db_xref="GeneID:133063632"
ORIGIN      
        1 mqscpspahp qlpilqtqmv sdgmtgsnpv spasssspas sgaggispqh iaqdssldgp
       61 pgppdgatvp leglslpqpa dlanrgpkwe kshaeiaeqa kheaeietri aelrkegfws
      121 lkrlpkvpep prpkghwdyl ceemqwlsad faqerrwkrg varkvvrmvi rhheeqrqke
      181 erarreeqak lrriasamak dvrqfwsnve kvvqfkqqsr leekrkkald lhldfivgqt
      241 ekysdllsqs lnqplasska gsspclgsss aassppppgs rmddedgdfq pqeeeeedde
      301 etieveeqqe gndaetqrre iellrregel pleellrslp pqllggpssp srtpsshdsd
      361 trdgpeegge eepsqvlkvk pppsvtqrnk qpwhpdedde eftanedeae deedtiaaee
      421 qlegevdham elselarege lsmeellqqy agayasdasa pgsgsseeed edeveanssd
      481 cepegateae ealqedsssq sdsaeeqsed edeehseeee tsessesees eseeseesqs
      541 qsqadeeeee dddfgveyll ardeeqsead ggsgpptpgp tttlgpkkei tdiaaaaesl
      601 qpkgytlatt qvktpiplll rgqlreyqhi gldwlvtmye kklngilade mglgktiqti
      661 sllahlacek gnwgphliiv ptsvmlnwem elkrwcpsfk iltyygaqke rklkrqgwtk
      721 pnafhvcits yklvlqdhqa frrknwryli ldeaqniknf ksqrwqslln fnsqrrlllt
      781 gtplqnslme lwslmhflmp hvfqshrefk ewfsnpltgm iegsqeyneg lvkrlhkvlr
      841 pfllrrvkvd vekqmpkkye hvircrlskr qrclyddfma qtttketlat ghfmsvinil
      901 mqlrkvcnhp nlfdprpvts pfitpgicfs taslvlratd vhplqridmg rfdliglegr
      961 vsryeadtfl pqyrlsrrvl levatapdpp prpkpvkmkv nrmlqpvpkq egrtvvvvns
     1021 prtplgpvpv rpppvpelsa qpspgltppv lpaplmvsas psgpplipas rppgpvllpp
     1081 lqpnsgplpq vlpsplgvls gtsrpptptl slkpappapv rlspapppgs snllkpltvp
     1141 pgytfpnaav tttstttvta pttavpapta pqrlilspdm qarlpsgevv sigqlasltq
     1201 rpvastggsk pltfqiqgnk ltltgaqvrq lavgqprplq rnvvhlvsag gqhhlisqpa
     1261 hvaliqavap tpgptpvsvl psstpsttpa ptglslplaa nqvpptmvnn tgvvkivvrq
     1321 aprdgltpvp plapaprpps sglpavltpr ptltpgrlst pslgtarapi ptstlvrpll
     1381 klvhspspev sasapgaapl tissplpvps slpgpasspv pvpnssplas pvsstvsvpv
     1441 ssslpisvst tlpspasapl tipisaplpv sasgptlltn vtpalapvvs aapgppslap
     1501 vgaspsasal tlglastpsl spsqapghpl llapasshvp glnsavapac spvlvpasal
     1561 aspfpatpnp apaqasllap aptasqalat slapmvapqt ailapspapp laplpvlaps
     1621 pgptsvlass qtsvpvlass stpgtplapa sslgpapaaa lapssaqtvv papvpsplps
     1681 lastqtlalp palastlggs spsqtlslgt gnpqnpfpaq tlsltpassl vpapaqtlsm
     1741 apgpplgpsq tlslapaptl apvspmgpap ahtltlapvs ssasllapas vqtltlspaq
     1801 vavptlgpaa aqtlalapas tqspasqass lvvsasgaap lpvtmvsrlp vskdepetlt
     1861 lrsgppspps tatsfsgprp rrqppppprs pfyldsleek rkrqrserle rifqlseahg
     1921 alapvygtev ldfctlpqpv aspigprspg pshptfwtyt eaarqavlfp qqrldqlsei
     1981 ierfifvmpp veapppslha chpppwlapr qaafqeqlah elwprarplh rivcnmrtqf
     2041 pdlrliqydc gklqtlavll rqlkaeghrv liftqmtrml dvleqfltyh ghlylrldgs
     2101 trveqrqalm erfnadkrif cfilstrsgg vgvnltgadt vvfydsdwnp tmdaqaqdrc
     2161 hrigqtrdvh iyrlisertv eenilkkanq krmlgdmaie ggnfttayfk qqtirelfdm
     2221 pleepsgssv psapddeeet vaskqthile qalcraedee diraatqaka eqvaelaefn
     2281 endgfpageg eeagrpgaed eemsraeqei aalveqltpi eryamkflea sleevsreel
     2341 kqaeeqveaa rkdldqakee vfrlpqeeee gpgagdevsc gtgggshrrs kkakaperpg
     2401 trvserlrga raetqganht pvpsthhtrs tstpprcspa rervprpapr prpppasapa
     2461 aipapipvpi sapipisapn pvtmlpvhil pspplpsaqi ppscssactp ppactpppaq
     2521 tpppaqtsll tpssplllgl psvpisppvt nlplglgpea elcaqamast esleladmas
     2581 setspvtlvp pkdllpvave ilpvseknls ltssapsptl aagsvpngqe qevpepaeat
     2641 ilsvlpdgee mpsclsennk lelppsaasd ellpepletd knseelveaq tptstpekpq
     2701 elvsaeatap stsssatstp egssparppr rrtsadieir gqgagrpgqp pgpkvlrklp
     2761 grlvtvveek elvrrrrqqr gtastlvpgv setgtspgsp sarsmlgpes spptscpcev
     2821 appstlptpt qqpfiarrri elgvtgggss engegallai tppavkrrrg rppkknrspv
     2881 dagrgvdeap sstskgktng adpvpgaetl ivaepvlspq lipgpqplgp qpvhrpepii
     2941 lspvekrrrg rppkardlpl pgttsspgdg nlesrtqplp lppplpplps llscptatva
     3001 ntvttlsist sppkrkrgrp pknppsprps qlpvldrdss svlescglgk qrqpqgqges
     3061 egsssdedgs rpltrlarlr leaegmrgrk segsmvvavi qddldladsg pggleltspv
     3121 vslapklrst rlrpgslvpp letekvprkr agapvssgpg lakrsrlqpp splgpegsve
     3181 eseaeasgee eegdgtsrrr pgprrlggat tqgdqrilrs sapphlagpt ishrgrkakt
//
LOCUS       XP_061009224            3240 aa            linear   MAM 02-DEC-2023
DEFINITION  helicase SRCAP isoform X1 [Dama dama].
ACCESSION   XP_061009224
VERSION     XP_061009224.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153241.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3240
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3240
                     /product="helicase SRCAP isoform X1"
                     /calculated_mol_wt=344722
     Region          88..>228
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     Region          127..193
                     /region_name="HSA"
                     /note="HSA domain; pfam07529"
                     /db_xref="CDD:462194"
     Region          392..>915
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
     Region          624..846
                     /region_name="DEXQc_SRCAP"
                     /note="DEXH/Q-box helicase domain of SRCAP; cd18003"
                     /db_xref="CDD:350761"
     Site            order(651..657,691,752..753)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350761"
     Region          <1037..1521
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1349..1858
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          2040..2175
                     /region_name="SF2_C_SNF"
                     /note="C-terminal helicase domain of the SNF family
                     helicases; cd18793"
                     /db_xref="CDD:350180"
     Site            order(2076..2077,2085,2127,2148..2149)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350180"
     Site            order(2133..2134,2136,2159,2162)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350180"
     Region          2249..>2370
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     Region          <2408..2813
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..3240
                     /gene="SRCAP"
                     /coded_by="XM_061153241.1:446..10168"
                     /db_xref="GeneID:133063632"
ORIGIN      
        1 mqscpspahp qlpilqtqmv sdgmtgsnpv spasssspas sgaggispqh iaqdssldgp
       61 pgppdgatvp leglslpqpa dlanrgpkwe kshaeiaeqa kheaeietri aelrkegfws
      121 lkrlpkvpep prpkghwdyl ceemqwlsad faqerrwkrg varkvvrmvi rhheeqrqke
      181 erarreeqak lrriasamak dvrqfwsnve kvvqfkqqsr leekrkkald lhldfivgqt
      241 ekysdllsqs lnqplasska gsspclgsss aassppppgs rmddedgdfq pqeeeeedde
      301 etieveeqqe gndaetqrre iellrregel pleellrslp pqllggpssp srtpsshdsd
      361 trdgpeegge eepsqvlkvk pppsvtqrnk qpwhpdedde eftanedeae deedtiaaee
      421 qlegevdham elselarege lsmeellqqy agayasdasa pgsgsseeed edeveanssd
      481 cepegateae ealqedsssq sdsaeeqsed edeehseeee tsessesees eseeseesqs
      541 qsqadeeeee dddfgveyll ardeeqsead ggsgpptpgp tttlgpkkei tdiaaaaesl
      601 qpkgytlatt qvktpiplll rgqlreyqhi gldwlvtmye kklngilade mglgktiqti
      661 sllahlacek gnwgphliiv ptsvmlnwem elkrwcpsfk iltyygaqke rklkrqgwtk
      721 pnafhvcits yklvlqdhqa frrknwryli ldeaqniknf ksqrwqslln fnsqrrlllt
      781 gtplqnslme lwslmhflmp hvfqshrefk ewfsnpltgm iegsqeyneg lvkrlhkvlr
      841 pfllrrvkvd vekqmpkkye hvircrlskr qrclyddfma qtttketlat ghfmsvinil
      901 mqlrkvcnhp nlfdprpvts pfitpgicfs taslvlratd vhplqridmg rfdliglegr
      961 vsryeadtfl pqyrlsrrvl levatapdpp prpkpvkmkv nrmlqpvpkq egrtvvvvns
     1021 prtplgpvpv rpppvpelsa qpspgltppv lpaplmvsas psgpplipas rppgpvllpp
     1081 lqpnsgplpq vlpsplgvls gtsrpptptl slkpappapv rlspapppgs snllkpltvp
     1141 pgytfpnaav tttstttvta pttavpapta pqrlilspdm qarlpsgevv sigqlasltq
     1201 rpvastggsk pltfqiqgnk ltltgaqvrq lavgqprplq rnvvhlvsag gqhhlisqpa
     1261 hvaliqavap tpgptpvsvl psstpsttpa ptglslplaa nqvpptmvnn tgvvkivvrq
     1321 aprdgltpvp plapaprpps sglpavltpr ptltpgrlst pslgtarapi ptstlvrpll
     1381 klvhspspev sasapgaapl tissplpvps slpgpasspv pvpnssplas pvsstvsvpv
     1441 ssslpisvst tlpspasapl tipisaplpv sasgptlltn vtpalapvvs aapgppslap
     1501 vgaspsasal tlglastpsl spsqapghpl llapasshvp glnsavapac spvlvpasal
     1561 aspfpatpnp apaqasllap aptasqalat slapmvapqt ailapspapp laplpvlaps
     1621 pgptsvlass qtsvpvlass stpgtplapa sslgpapaaa lapssaqtvv papvpsplps
     1681 lastqtlalp palastlggs spsqtlslgt gnpqnpfpaq tlsltpassl vpapaqtlsm
     1741 apgpplgpsq tlslapaptl apvspmgpap ahtltlapvs ssasllapas vqtltlspaq
     1801 vavptlgpaa aqtlalapas tqspasqass lvvsasgaap lpvtmvsrlp vskdepetlt
     1861 lrsgppspps tatsfsgprp rrqppppprs pfyldsleek rkrqrserle rifqlseahg
     1921 alapvygtev ldfctlpqpv aspigprspg pshptfwtyt eaarqavlfp qqrldqlsei
     1981 ierfifvmpp veapppslha chpppwlapr qaafqeqlah elwprarplh rivcnmrtqf
     2041 pdlrliqydc gklqtlavll rqlkaeghrv liftqmtrml dvleqfltyh ghlylrldgs
     2101 trveqrqalm erfnadkrif cfilstrsgg vgvnltgadt vvfydsdwnp tmdaqaqdrc
     2161 hrigqtrdvh iyrlisertv eenilkkanq krmlgdmaie ggnfttayfk qqtirelfdm
     2221 pleepsgssv psapddeeet vaskqthile qalcraedee diraatqaka eqvaelaefn
     2281 endgfpageg eeagrpgaed eemsraeqei aalveqltpi eryamkflea sleevsreel
     2341 kqaeeqveaa rkdldqakee vfrlpqeeee gpgagdevsc gtgggshrrs kkakaperpg
     2401 trvserlrga raetqganht pvpsthhtrs tstpprcspa rervprpapr prpppasapa
     2461 aipapipvpi sapipisapn pvtmlpvhil pspplpsaqi ppscssactp ppactpppaq
     2521 tpppaqtsll tpssplllgl psvpisppvt nlplglgpea elcaqamast esleladmas
     2581 setspvtlvp pkdllpvave ilpvseknls ltssapsptl aagsvpngqe qevpepaeat
     2641 ilsvlpdgee mpsclsennk lelppsaasd ellpepletd knseelveaq tptstpekpq
     2701 elvsaeatap stsssatstp egssparppr rrtsadieir gqgagrpgqp pgpkvlrklp
     2761 grlvtvveek elvrrrrqqr gtastlvpgv setgtspgsp sarsmlgpes spptscpcev
     2821 appstlptpt qqpfiarrri elgvtgggss engegallai tppavkrrrg rppkknrspv
     2881 dagrgvdeap sstskgktng adpvpgaetl ivaepvlspq lipgpqplgp qpvhrpepii
     2941 lspvekrrrg rppkardlpl pgttsspgdg nlesrtqplp lppplpplps llscptatva
     3001 ntvttlsist sppkrkrgrp pknppsprps qlpvldrdss svlescglgk qrqpqgqges
     3061 egsssdedgs rpltrlarlr leaegmrgrk segsmvvavi qddldladsg pggleltspv
     3121 vslapklrst rlrpgslvpp letekvprkr agapvssgpg lakrsrlqpp splgpegsve
     3181 eseaeasgee eegdgtsrrr pgprrlggat tqgdqrilrs sapphlagpt ishrgrkakt
//
LOCUS       XP_061009225            3178 aa            linear   MAM 02-DEC-2023
DEFINITION  helicase SRCAP isoform X2 [Dama dama].
ACCESSION   XP_061009225
VERSION     XP_061009225.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153242.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3178
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3178
                     /product="helicase SRCAP isoform X2"
                     /calculated_mol_wt=338612
     Region          88..>228
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     Region          127..193
                     /region_name="HSA"
                     /note="HSA domain; pfam07529"
                     /db_xref="CDD:462194"
     Region          392..>915
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
     Region          624..846
                     /region_name="DEXQc_SRCAP"
                     /note="DEXH/Q-box helicase domain of SRCAP; cd18003"
                     /db_xref="CDD:350761"
     Site            order(651..657,691,752..753)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350761"
     Region          <1037..1531
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1287..1796
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1978..2113
                     /region_name="SF2_C_SNF"
                     /note="C-terminal helicase domain of the SNF family
                     helicases; cd18793"
                     /db_xref="CDD:350180"
     Site            order(2014..2015,2023,2065,2086..2087)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350180"
     Site            order(2071..2072,2074,2097,2100)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350180"
     Region          2187..>2308
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     Region          <2346..2751
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..3178
                     /gene="SRCAP"
                     /coded_by="XM_061153242.1:424..9960"
                     /db_xref="GeneID:133063632"
ORIGIN      
        1 mqscpspahp qlpilqtqmv sdgmtgsnpv spasssspas sgaggispqh iaqdssldgp
       61 pgppdgatvp leglslpqpa dlanrgpkwe kshaeiaeqa kheaeietri aelrkegfws
      121 lkrlpkvpep prpkghwdyl ceemqwlsad faqerrwkrg varkvvrmvi rhheeqrqke
      181 erarreeqak lrriasamak dvrqfwsnve kvvqfkqqsr leekrkkald lhldfivgqt
      241 ekysdllsqs lnqplasska gsspclgsss aassppppgs rmddedgdfq pqeeeeedde
      301 etieveeqqe gndaetqrre iellrregel pleellrslp pqllggpssp srtpsshdsd
      361 trdgpeegge eepsqvlkvk pppsvtqrnk qpwhpdedde eftanedeae deedtiaaee
      421 qlegevdham elselarege lsmeellqqy agayasdasa pgsgsseeed edeveanssd
      481 cepegateae ealqedsssq sdsaeeqsed edeehseeee tsessesees eseeseesqs
      541 qsqadeeeee dddfgveyll ardeeqsead ggsgpptpgp tttlgpkkei tdiaaaaesl
      601 qpkgytlatt qvktpiplll rgqlreyqhi gldwlvtmye kklngilade mglgktiqti
      661 sllahlacek gnwgphliiv ptsvmlnwem elkrwcpsfk iltyygaqke rklkrqgwtk
      721 pnafhvcits yklvlqdhqa frrknwryli ldeaqniknf ksqrwqslln fnsqrrlllt
      781 gtplqnslme lwslmhflmp hvfqshrefk ewfsnpltgm iegsqeyneg lvkrlhkvlr
      841 pfllrrvkvd vekqmpkkye hvircrlskr qrclyddfma qtttketlat ghfmsvinil
      901 mqlrkvcnhp nlfdprpvts pfitpgicfs taslvlratd vhplqridmg rfdliglegr
      961 vsryeadtfl pqyrlsrrvl levatapdpp prpkpvkmkv nrmlqpvpkq egrtvvvvns
     1021 prtplgpvpv rpppvpelsa qpspgltppv lpaplmvsas psgpplipas rppgpvllpp
     1081 lqpnsgplpq vlpsplgvls gtsrpptptl slkpappapv rlspapppgs snllkpltvp
     1141 pgytfpnaav tttstttvta pttavpapta pqrlilspdm qarlpsgevv sigqlasltq
     1201 rpvastggsk pltfqiqgnk ltltgaqvrq lavgqprplq mpptmvnntg vvkivvrqap
     1261 rdgltpvppl apaprppssg lpavltprpt ltpgrlstps lgtarapipt stlvrpllkl
     1321 vhspspevsa sapgaaplti ssplpvpssl pgpasspvpv pnssplaspv sstvsvpvss
     1381 slpisvsttl pspasaplti pisaplpvsa sgptlltnvt palapvvsaa pgppslapvg
     1441 aspsasaltl glastpslsp sqapghplll apasshvpgl nsavapacsp vlvpasalas
     1501 pfpatpnpap aqasllapap tasqalatsl apmvapqtai lapspappla plpvlapspg
     1561 ptsvlassqt svpvlassst pgtplapass lgpapaaala pssaqtvvpa pvpsplpsla
     1621 stqtlalppa lastlggssp sqtlslgtgn pqnpfpaqtl sltpasslvp apaqtlsmap
     1681 gpplgpsqtl slapaptlap vspmgpapah tltlapvsss asllapasvq tltlspaqva
     1741 vptlgpaaaq tlalapastq spasqasslv vsasgaaplp vtmvsrlpvs kdepetltlr
     1801 sgppsppsta tsfsgprprr qppppprspf yldsleekrk rqrserleri fqlseahgal
     1861 apvygtevld fctlpqpvas pigprspgps hptfwtytea arqavlfpqq rldqlseiie
     1921 rfifvmppve apppslhach pppwlaprqa afqeqlahel wprarplhri vcnmrtqfpd
     1981 lrliqydcgk lqtlavllrq lkaeghrvli ftqmtrmldv leqfltyhgh lylrldgstr
     2041 veqrqalmer fnadkrifcf ilstrsggvg vnltgadtvv fydsdwnptm daqaqdrchr
     2101 igqtrdvhiy rlisertvee nilkkanqkr mlgdmaiegg nfttayfkqq tirelfdmpl
     2161 eepsgssvps apddeeetva skqthileqa lcraedeedi raatqakaeq vaelaefnen
     2221 dgfpagegee agrpgaedee msraeqeiaa lveqltpier yamkfleasl eevsreelkq
     2281 aeeqveaark dldqakeevf rlpqeeeegp gagdevscgt gggshrrskk akaperpgtr
     2341 vserlrgara etqganhtpv psthhtrsts tpprcspare rvprpaprpr pppasapaai
     2401 papipvpisa pipisapnpv tmlpvhilps pplpsaqipp scssactppp actpppaqtp
     2461 ppaqtslltp ssplllglps vpisppvtnl plglgpeael caqamastes leladmasse
     2521 tspvtlvppk dllpvaveil pvseknlslt ssapsptlaa gsvpngqeqe vpepaeatil
     2581 svlpdgeemp sclsennkle lppsaasdel lpepletdkn seelveaqtp tstpekpqel
     2641 vsaeatapst sssatstpeg ssparpprrr tsadieirgq gagrpgqppg pkvlrklpgr
     2701 lvtvveekel vrrrrqqrgt astlvpgvse tgtspgspsa rsmlgpessp ptscpcevap
     2761 pstlptptqq pfiarrriel gvtgggssen gegallaitp pavkrrrgrp pkknrspvda
     2821 grgvdeapss tskgktngad pvpgaetliv aepvlspqli pgpqplgpqp vhrpepiils
     2881 pvekrrrgrp pkardlplpg ttsspgdgnl esrtqplplp pplpplpsll scptatvant
     2941 vttlsistsp pkrkrgrppk nppsprpsql pvldrdsssv lescglgkqr qpqgqgeseg
     3001 sssdedgsrp ltrlarlrle aegmrgrkse gsmvvaviqd dldladsgpg gleltspvvs
     3061 lapklrstrl rpgslvpple tekvprkrag apvssgpgla krsrlqppsp lgpegsvees
     3121 eaeasgeeee gdgtsrrrpg prrlggattq gdqrilrssa pphlagptis hrgrkakt
//
LOCUS       XP_061009226            1001 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase BRE1B [Dama dama].
ACCESSION   XP_061009226
VERSION     XP_061009226.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153243.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1001
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1001
                     /product="E3 ubiquitin-protein ligase BRE1B"
                     /calculated_mol_wt=113603
     Region          224..947
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          923..1000
                     /region_name="RING-HC_RNF40"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 40 (RNF40); cd16815"
                     /db_xref="CDD:438464"
     CDS             1..1001
                     /gene="RNF40"
                     /coded_by="XM_061153243.1:208..3213"
                     /db_xref="GeneID:133063633"
ORIGIN      
        1 msgpgnkraa gdggsgppek klsreekttt tliepirlgg issteemdlk vlqfknkkla
       61 erleqrqace delreriekl ekrqatddat llivnrywaq ldetveallr hhesqgelss
      121 gteapgtqeg ptrdetplte pgtselrepl pmqlrpplse palafvvalg assseevelq
      181 lqgrmefska avsrvveasd rlqrrveelc qrvysrgdse ppsevaqart relgrenrrl
      241 qdlatqlqek hhrisleyse lqdkvtsaet kvlemettve dlqwdieklr kreqklnkhl
      301 aealeqlnsg yyvsgsssgf qggqitlsmq kfemlnaele enqelansrm aeleklqael
      361 qgavrtnerl kvalrslpee vvretgeyrm lqaqfsllyn eslqvktqld earglllatk
      421 nshlrhiehm esdelglqkk lrteviqled tlaqvrkeye mlriefeqnl aaneqagpin
      481 remrhlissl qnhnhqlkgd aqrykrklre vqaeiaklra qasgsthsip slghpedssl
      541 gasvpgkeeg gpgpvgapdt rkemasmpga aittssakke dlvpseeetq altpgtqgps
      601 srgrepearp krelreregp vlgppsvasa lsradrekak veeakrkese llkglrvelk
      661 kaqesqkemk llldmyksap keqrdkvqlm aaerkakaev delrgrirel eerdrreskk
      721 iadedalrri rqaeeqiehl qrklgatkqe eeallsemdv tgqafedmqe qngrllqqlr
      781 ekddanfklm serikanqih kllreekdel geqvlglksq vdaqlltvqk leekeralqg
      841 slggvekelt lrsqalelnk rkaveaaqla edlkvqlehv qtrlreiqpc laesraarek
      901 esfnlkraqe disrlrrkle kqrkvevyad adeilqeeik eykarltcpc cntrkkdavl
      961 tkcfhvfcfe cvrgryearq rkcpkcnaaf gahdfhrvyi s
//
LOCUS       XP_061009227             406 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphorylase b kinase gamma catalytic chain, liver/testis isoform
            [Dama dama].
ACCESSION   XP_061009227
VERSION     XP_061009227.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153244.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..406
                     /product="phosphorylase b kinase gamma catalytic chain,
                     liver/testis isoform"
                     /calculated_mol_wt=46362
     Region          13..291
                     /region_name="STKc_PhKG2"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Phosphorylase kinase Gamma 2 subunit; cd14181"
                     /db_xref="CDD:271083"
     Site            order(30..31,33..34,36,38,51,53,91,107..108,110,114,116,
                     152..153,155,157..158,160,171,174,186..192,194)
                     /site_type="active"
                     /db_xref="CDD:271083"
     Site            order(30..31,33..34,36,38,51,53,91,107..108,110,114,153,
                     155,157..158,160,171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271083"
     Site            order(34,114,116,152..153,155,157,174,186..192,194)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271083"
     Site            170..192
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271083"
     CDS             1..406
                     /gene="PHKG2"
                     /coded_by="XM_061153244.1:130..1350"
                     /db_xref="GeneID:133063634"
ORIGIN      
        1 mtldvgpede lpdwaaakef yqkydpkdvi grgvssvvrr cvhratgqef avkimevtae
       61 rlspeqleev reatrrethi lrqvaghphi itlidsyess sfmflvfdlm rkgelfdylt
      121 ekvalseket rsimrsllea vsflhnnniv hrdlkpenil ldddmqirls dfgfschlep
      181 geklrelcgt pgylapeilk csmdethpgy gkevdlwacg vilftllags ppfwhrrqil
      241 mlrmimegqy qfsspewddr sdtvkdlisr llqvdpverl taeqalqhpf fercegsqaw
      301 nltprqrfrv avwtvlaagr valsahrvrp ltksallrdp yalrpvrrli dncafrlygh
      361 wvkkgeqqnr aalfqhrppg pfpilgpeee gdsatiaede amlvlg
//
LOCUS       XP_061009228             406 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphorylase b kinase gamma catalytic chain, liver/testis isoform
            [Dama dama].
ACCESSION   XP_061009228
VERSION     XP_061009228.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153245.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..406
                     /product="phosphorylase b kinase gamma catalytic chain,
                     liver/testis isoform"
                     /calculated_mol_wt=46362
     Region          13..291
                     /region_name="STKc_PhKG2"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Phosphorylase kinase Gamma 2 subunit; cd14181"
                     /db_xref="CDD:271083"
     Site            order(30..31,33..34,36,38,51,53,91,107..108,110,114,116,
                     152..153,155,157..158,160,171,174,186..192,194)
                     /site_type="active"
                     /db_xref="CDD:271083"
     Site            order(30..31,33..34,36,38,51,53,91,107..108,110,114,153,
                     155,157..158,160,171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271083"
     Site            order(34,114,116,152..153,155,157,174,186..192,194)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271083"
     Site            170..192
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271083"
     CDS             1..406
                     /gene="PHKG2"
                     /coded_by="XM_061153245.1:111..1331"
                     /db_xref="GeneID:133063634"
ORIGIN      
        1 mtldvgpede lpdwaaakef yqkydpkdvi grgvssvvrr cvhratgqef avkimevtae
       61 rlspeqleev reatrrethi lrqvaghphi itlidsyess sfmflvfdlm rkgelfdylt
      121 ekvalseket rsimrsllea vsflhnnniv hrdlkpenil ldddmqirls dfgfschlep
      181 geklrelcgt pgylapeilk csmdethpgy gkevdlwacg vilftllags ppfwhrrqil
      241 mlrmimegqy qfsspewddr sdtvkdlisr llqvdpverl taeqalqhpf fercegsqaw
      301 nltprqrfrv avwtvlaagr valsahrvrp ltksallrdp yalrpvrrli dncafrlygh
      361 wvkkgeqqnr aalfqhrppg pfpilgpeee gdsatiaede amlvlg
//
LOCUS       XP_061009229             332 aa            linear   MAM 02-DEC-2023
DEFINITION  cilia- and flagella-associated protein 119 [Dama dama].
ACCESSION   XP_061009229
VERSION     XP_061009229.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153246.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..332
                     /product="cilia- and flagella-associated protein 119"
                     /calculated_mol_wt=38023
     Region          127..225
                     /region_name="CLAMP"
                     /note="Flagellar C1a complex subunit C1a-32; pfam14769"
                     /db_xref="CDD:464306"
     CDS             1..332
                     /gene="CFAP119"
                     /coded_by="XM_061153246.1:307..1305"
                     /db_xref="GeneID:133063636"
ORIGIN      
        1 mirrkssqfq glkmqselvq hyelrreper dlssldesat rmgtgvrtes rtvasvdvdn
       61 dpaanlfppp lpqpriciwk yldihsmhrl ektasteemr evlaellglg spekslrdai
      121 tldlfshali fcrqqgfsle qtstacallq dlhkacietp lgnveecyry ftsvlfchgv
      181 rrppfsidlf keeqllalad yvvntyfrhf klykyvftpq vrldlsltyt glkapnlwse
      241 detekekgge veqqgvikqe vepetviqpe pepsqvsilr ayiktqmnke lrqlqqlvee
      301 rlkaseerls sklttlerpl qlppgkgknk ik
//
LOCUS       XP_061009230             109 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 265 [Dama dama].
ACCESSION   XP_061009230
VERSION     XP_061009230.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153247.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..109
                     /product="transmembrane protein 265"
                     /calculated_mol_wt=11787
     Region          33..86
                     /region_name="CD225"
                     /note="Interferon-induced transmembrane protein;
                     pfam04505"
                     /db_xref="CDD:461336"
     CDS             1..109
                     /gene="TMEM265"
                     /coded_by="XM_061153247.1:438..767"
                     /db_xref="GeneID:133063637"
ORIGIN      
        1 medeenaaes lvcnteaacs pspirccwlr lrclaatsii cgcsclgiva lvfaikaeer
       61 hkagrleeav hwgararrfi lasfavwltv lvlgplllwl vsyaiaqae
//
LOCUS       XP_061009231             868 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 629 [Dama dama].
ACCESSION   XP_061009231
VERSION     XP_061009231.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153248.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..868
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..868
                     /product="zinc finger protein 629"
                     /calculated_mol_wt=95816
     Region          150..172
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          152..172
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          179..200
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          180..200
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(185,187,189,191..192,195..196,199,213,215,219..220,
                     223..224,227,241,243,245,247..248,251..252,255)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          204..512
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          208..228
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(208,211,224,228)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          236..256
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          264..284
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          292..312
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(297,299,301,303..304,307..308,311,325,327,331..332,
                     335..336,339,353,355,357,359..360,363..364,367)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          320..340
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(320,323,336,340)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          348..368
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          376..396
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          400..790
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          404..424
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          432..452
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(437,439,441,443..444,447..448,451,465,467,471..472,
                     475..476,479,493,495,497,499..500,503..504,507)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          460..480
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(460,463,476,480)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          488..508
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          516..536
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          571..591
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          664..684
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(669,671,673,675..676,679..680,683,721,723,727..728,
                     731..732,735,774,776,778,780..781,784..785,788)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          716..736
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(716,719,732,736)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          769..789
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          843..863
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..868
                     /gene="ZNF629"
                     /coded_by="XM_061153248.1:854..3460"
                     /db_xref="GeneID:133063638"
ORIGIN      
        1 mepetalwgp dlqdpgqspd dahpgaesgn eeesaqqess geevilgdpd qspefkdpse
       61 mpletpsqda sgaqdapapl ghpspsdhqt pldaptpevv ptpsdwtkac easwqwgtlt
      121 twnsppvvpa sepslrelvq grpagaekpy icnecgksfs qwskllrhqr ihtgerpntc
      181 secgksftqs shlvqhqrth tgekpykcpd cgkcfswssn lvqhqrthtg ekpykctece
      241 kaftqstnli khqrshtgek pykcgecrra fyrssdliqh qathtgekpy kcpecgkrfg
      301 qnhnllkhqk ihagekpyrc tecgksfiqs seltqhqrth tgekpyecle cgksfghsst
      361 likhqrthlr edpfkcpvcg ktftlsatll rhqrthtger pykcpecgks fsvssnlinh
      421 qrihrgerpy icadcgksfi msstlirhqr ihtgekpykc sdcgksfirs shliqhrrth
      481 tgekpykcpe cgksfsqssn lithvrthmd enlfvcsdcg kafleahele qhrvihergk
      541 tparraqgdg llglgdpall tpppgakphk clvcgkgfnd egifmqhqri higenpykns
      601 dglpahpaak spqfrsprlp fggnsfpgaa egradppgqp fkmpdgqesf shrlglpssk
      661 syicshcges fldrsvllqh qvthgsekpf lfpdyriglg egagpspfls gkpfkcpeck
      721 ksfalssell lhqkvhargk aqkspelgks ssvllehlrs plgarpyscs dcgasfldrl
      781 alirhqetht reksptpedp lpepatlsts qegegeapap tesssheegg spktsleekp
      841 ylcpecgdgf tevsalllhr schpgvtl
//
LOCUS       XP_061009232             868 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 629 [Dama dama].
ACCESSION   XP_061009232
VERSION     XP_061009232.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153249.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..868
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..868
                     /product="zinc finger protein 629"
                     /calculated_mol_wt=95816
     Region          150..172
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          152..172
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          179..200
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          180..200
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(185,187,189,191..192,195..196,199,213,215,219..220,
                     223..224,227,241,243,245,247..248,251..252,255)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          204..512
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          208..228
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(208,211,224,228)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          236..256
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          264..284
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          292..312
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(297,299,301,303..304,307..308,311,325,327,331..332,
                     335..336,339,353,355,357,359..360,363..364,367)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          320..340
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(320,323,336,340)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          348..368
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          376..396
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          400..790
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          404..424
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          432..452
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(437,439,441,443..444,447..448,451,465,467,471..472,
                     475..476,479,493,495,497,499..500,503..504,507)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          460..480
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(460,463,476,480)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          488..508
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          516..536
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          571..591
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          664..684
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(669,671,673,675..676,679..680,683,721,723,727..728,
                     731..732,735,774,776,778,780..781,784..785,788)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          716..736
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(716,719,732,736)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          769..789
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          843..863
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..868
                     /gene="ZNF629"
                     /coded_by="XM_061153249.1:196..2802"
                     /db_xref="GeneID:133063638"
ORIGIN      
        1 mepetalwgp dlqdpgqspd dahpgaesgn eeesaqqess geevilgdpd qspefkdpse
       61 mpletpsqda sgaqdapapl ghpspsdhqt pldaptpevv ptpsdwtkac easwqwgtlt
      121 twnsppvvpa sepslrelvq grpagaekpy icnecgksfs qwskllrhqr ihtgerpntc
      181 secgksftqs shlvqhqrth tgekpykcpd cgkcfswssn lvqhqrthtg ekpykctece
      241 kaftqstnli khqrshtgek pykcgecrra fyrssdliqh qathtgekpy kcpecgkrfg
      301 qnhnllkhqk ihagekpyrc tecgksfiqs seltqhqrth tgekpyecle cgksfghsst
      361 likhqrthlr edpfkcpvcg ktftlsatll rhqrthtger pykcpecgks fsvssnlinh
      421 qrihrgerpy icadcgksfi msstlirhqr ihtgekpykc sdcgksfirs shliqhrrth
      481 tgekpykcpe cgksfsqssn lithvrthmd enlfvcsdcg kafleahele qhrvihergk
      541 tparraqgdg llglgdpall tpppgakphk clvcgkgfnd egifmqhqri higenpykns
      601 dglpahpaak spqfrsprlp fggnsfpgaa egradppgqp fkmpdgqesf shrlglpssk
      661 syicshcges fldrsvllqh qvthgsekpf lfpdyriglg egagpspfls gkpfkcpeck
      721 ksfalssell lhqkvhargk aqkspelgks ssvllehlrs plgarpyscs dcgasfldrl
      781 alirhqetht reksptpedp lpepatlsts qegegeapap tesssheegg spktsleekp
      841 ylcpecgdgf tevsalllhr schpgvtl
//
LOCUS       XP_061009236             868 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 629 [Dama dama].
ACCESSION   XP_061009236
VERSION     XP_061009236.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153253.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..868
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..868
                     /product="zinc finger protein 629"
                     /calculated_mol_wt=95816
     Region          150..172
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          152..172
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          179..200
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          180..200
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(185,187,189,191..192,195..196,199,213,215,219..220,
                     223..224,227,241,243,245,247..248,251..252,255)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          204..512
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          208..228
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(208,211,224,228)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          236..256
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          264..284
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          292..312
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(297,299,301,303..304,307..308,311,325,327,331..332,
                     335..336,339,353,355,357,359..360,363..364,367)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          320..340
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(320,323,336,340)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          348..368
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          376..396
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          400..790
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          404..424
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          432..452
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(437,439,441,443..444,447..448,451,465,467,471..472,
                     475..476,479,493,495,497,499..500,503..504,507)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          460..480
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(460,463,476,480)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          488..508
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          516..536
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          571..591
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          664..684
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(669,671,673,675..676,679..680,683,721,723,727..728,
                     731..732,735,774,776,778,780..781,784..785,788)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          716..736
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(716,719,732,736)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          769..789
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          843..863
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..868
                     /gene="ZNF629"
                     /coded_by="XM_061153253.1:608..3214"
                     /db_xref="GeneID:133063638"
ORIGIN      
        1 mepetalwgp dlqdpgqspd dahpgaesgn eeesaqqess geevilgdpd qspefkdpse
       61 mpletpsqda sgaqdapapl ghpspsdhqt pldaptpevv ptpsdwtkac easwqwgtlt
      121 twnsppvvpa sepslrelvq grpagaekpy icnecgksfs qwskllrhqr ihtgerpntc
      181 secgksftqs shlvqhqrth tgekpykcpd cgkcfswssn lvqhqrthtg ekpykctece
      241 kaftqstnli khqrshtgek pykcgecrra fyrssdliqh qathtgekpy kcpecgkrfg
      301 qnhnllkhqk ihagekpyrc tecgksfiqs seltqhqrth tgekpyecle cgksfghsst
      361 likhqrthlr edpfkcpvcg ktftlsatll rhqrthtger pykcpecgks fsvssnlinh
      421 qrihrgerpy icadcgksfi msstlirhqr ihtgekpykc sdcgksfirs shliqhrrth
      481 tgekpykcpe cgksfsqssn lithvrthmd enlfvcsdcg kafleahele qhrvihergk
      541 tparraqgdg llglgdpall tpppgakphk clvcgkgfnd egifmqhqri higenpykns
      601 dglpahpaak spqfrsprlp fggnsfpgaa egradppgqp fkmpdgqesf shrlglpssk
      661 syicshcges fldrsvllqh qvthgsekpf lfpdyriglg egagpspfls gkpfkcpeck
      721 ksfalssell lhqkvhargk aqkspelgks ssvllehlrs plgarpyscs dcgasfldrl
      781 alirhqetht reksptpedp lpepatlsts qegegeapap tesssheegg spktsleekp
      841 ylcpecgdgf tevsalllhr schpgvtl
//
LOCUS       XP_061009237             868 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 629 [Dama dama].
ACCESSION   XP_061009237
VERSION     XP_061009237.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153254.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..868
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..868
                     /product="zinc finger protein 629"
                     /calculated_mol_wt=95816
     Region          150..172
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          152..172
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          179..200
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          180..200
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(185,187,189,191..192,195..196,199,213,215,219..220,
                     223..224,227,241,243,245,247..248,251..252,255)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          204..512
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          208..228
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(208,211,224,228)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          236..256
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          264..284
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          292..312
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(297,299,301,303..304,307..308,311,325,327,331..332,
                     335..336,339,353,355,357,359..360,363..364,367)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          320..340
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(320,323,336,340)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          348..368
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          376..396
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          400..790
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          404..424
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          432..452
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(437,439,441,443..444,447..448,451,465,467,471..472,
                     475..476,479,493,495,497,499..500,503..504,507)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          460..480
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(460,463,476,480)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          488..508
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          516..536
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          571..591
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          664..684
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(669,671,673,675..676,679..680,683,721,723,727..728,
                     731..732,735,774,776,778,780..781,784..785,788)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          716..736
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(716,719,732,736)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          769..789
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          843..863
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..868
                     /gene="ZNF629"
                     /coded_by="XM_061153254.1:505..3111"
                     /db_xref="GeneID:133063638"
ORIGIN      
        1 mepetalwgp dlqdpgqspd dahpgaesgn eeesaqqess geevilgdpd qspefkdpse
       61 mpletpsqda sgaqdapapl ghpspsdhqt pldaptpevv ptpsdwtkac easwqwgtlt
      121 twnsppvvpa sepslrelvq grpagaekpy icnecgksfs qwskllrhqr ihtgerpntc
      181 secgksftqs shlvqhqrth tgekpykcpd cgkcfswssn lvqhqrthtg ekpykctece
      241 kaftqstnli khqrshtgek pykcgecrra fyrssdliqh qathtgekpy kcpecgkrfg
      301 qnhnllkhqk ihagekpyrc tecgksfiqs seltqhqrth tgekpyecle cgksfghsst
      361 likhqrthlr edpfkcpvcg ktftlsatll rhqrthtger pykcpecgks fsvssnlinh
      421 qrihrgerpy icadcgksfi msstlirhqr ihtgekpykc sdcgksfirs shliqhrrth
      481 tgekpykcpe cgksfsqssn lithvrthmd enlfvcsdcg kafleahele qhrvihergk
      541 tparraqgdg llglgdpall tpppgakphk clvcgkgfnd egifmqhqri higenpykns
      601 dglpahpaak spqfrsprlp fggnsfpgaa egradppgqp fkmpdgqesf shrlglpssk
      661 syicshcges fldrsvllqh qvthgsekpf lfpdyriglg egagpspfls gkpfkcpeck
      721 ksfalssell lhqkvhargk aqkspelgks ssvllehlrs plgarpyscs dcgasfldrl
      781 alirhqetht reksptpedp lpepatlsts qegegeapap tesssheegg spktsleekp
      841 ylcpecgdgf tevsalllhr schpgvtl
//
LOCUS       XP_061009238             217 aa            linear   MAM 02-DEC-2023
DEFINITION  B-cell CLL/lymphoma 7 protein family member C isoform X1 [Dama
            dama].
ACCESSION   XP_061009238
VERSION     XP_061009238.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153255.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..217
                     /product="B-cell CLL/lymphoma 7 protein family member C
                     isoform X1"
                     /calculated_mol_wt=23337
     Region          4..50
                     /region_name="BCL_N"
                     /note="BCL7, N-terminal conserver region; pfam04714"
                     /db_xref="CDD:461406"
     Region          <113..>217
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..217
                     /gene="BCL7C"
                     /coded_by="XM_061153255.1:132..785"
                     /db_xref="GeneID:133063639"
ORIGIN      
        1 magrtvraet rsrakddikk vmatiekvrr wekrwvtvgd tslrifkwvp vvdpqeeerr
       61 ragggaersr grerrgrgas prgggplill dlndensnqs fhsegslqkg tepspggtpq
      121 psrpvspagp pegvpedaqp pqlgqerdpg gipagstdep pmltkeepvp elleaeapea
      181 ypvfepvpsv peaaqgdped segapplkri ypnapdp
//
LOCUS       XP_061009239             243 aa            linear   MAM 02-DEC-2023
DEFINITION  B-cell CLL/lymphoma 7 protein family member C isoform X2 [Dama
            dama].
ACCESSION   XP_061009239
VERSION     XP_061009239.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153256.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..243
                     /product="B-cell CLL/lymphoma 7 protein family member C
                     isoform X2"
                     /calculated_mol_wt=26216
     Region          4..50
                     /region_name="BCL_N"
                     /note="BCL7, N-terminal conserver region; pfam04714"
                     /db_xref="CDD:461406"
     CDS             1..243
                     /gene="BCL7C"
                     /coded_by="XM_061153256.1:144..875"
                     /db_xref="GeneID:133063639"
ORIGIN      
        1 magrtvraet rsrakddikk vmatiekvrr wekrwvtvgd tslrifkwvp vvdpqeeerr
       61 ragggaersr grerrgrgas prgggplill dlndensnqs fhsegslqkg tepspggtpq
      121 psrpvspagp pegvpedaqp pqlgqerdpg gipagstdep pmltkeepvp elleaedsgv
      181 rvtrralhek glkteplrrl lprrglrtna rpssagpppe prapgggska praprtipqg
      241 kgr
//
LOCUS       XP_061009240             674 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box/LRR-repeat protein 19 isoform X1 [Dama dama].
ACCESSION   XP_061009240
VERSION     XP_061009240.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153257.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..674
                     /product="F-box/LRR-repeat protein 19 isoform X1"
                     /calculated_mol_wt=73610
     Region          <30..57
                     /region_name="zf-CXXC"
                     /note="CXXC zinc finger domain; pfam02008"
                     /db_xref="CDD:366873"
     Region          67..128
                     /region_name="PHD_FXL19"
                     /note="PHD finger found in F-box and leucine-rich repeat
                     protein 19 (FBXL19); cd15645"
                     /db_xref="CDD:277115"
     Site            order(67,90..94,98,123)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277115"
     Region          401..443
                     /region_name="F-box_JHDM"
                     /note="F-box domain found in the JmjC domain-containing
                     histone demethylation protein (JHDM) family; cd22122"
                     /db_xref="CDD:438894"
     Site            order(404..405,407..409,411..412,414..416,418..419,
                     422..423,425..427,431)
                     /site_type="other"
                     /note="Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438894"
     Region          441..465
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          446..645
                     /region_name="AMN1"
                     /note="Antagonist of mitotic exit network protein 1;
                     cd09293"
                     /db_xref="CDD:187754"
     Region          466..488
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          490..513
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          514..553
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          554..578
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          579..603
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          609..633
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          634..666
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..674
                     /gene="FBXL19"
                     /coded_by="XM_061153257.1:340..2364"
                     /db_xref="GeneID:133063642"
ORIGIN      
        1 mssssrgpga garrrrtrcr rcracvrtec gdchfcrdmk kfggpgrmkq scllrqctap
       61 vlphtavcll cgeagkedtv egeeekfgls lmecticnei vhpgclkmgk aegvinaeip
      121 ncwecprctq egrtskdsge gpgrrradng eegaslgsgw klteepplpp ppprrkgplp
      181 agpppedvpg ppkrkereag nepptprkkv kggrerhlkk vggdacllrg sdpggpgllp
      241 prvlnpsqaf sschpglppe nwekpkppla saegpavpsp spqreklerf krmcqllerv
      301 pdtsssssds dsdsdssgts lsedeapgea rngrrpargs sgekenrggr ravrpggggp
      361 llswplgpap pprppqlerh vvrppprspe pdtlplaags dhplpraawl rvfqhlgpre
      421 lcicmrvcrt wsrwcydkrl wprmdlsrrk sltppmlsgv vrrqpraldl swtgvskkql
      481 mwllnrlqgl qelvlsgcsw lsvsalgsap lpalrlldlr wiedvkdsql relllpppdt
      541 kpgqtesrgr lqgvaelrla gleltdaslr lllrhapqls aldlshcahv gdpsvhllta
      601 ptsplretlv hlnlagchrl tdhclplfrr cprlrrldlr scrqlspeac arlaaagppg
      661 pfrcpeekll lkds
//
LOCUS       XP_061009241             631 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box/LRR-repeat protein 19 isoform X2 [Dama dama].
ACCESSION   XP_061009241
VERSION     XP_061009241.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153258.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..631
                     /product="F-box/LRR-repeat protein 19 isoform X2"
                     /calculated_mol_wt=69232
     Region          <30..57
                     /region_name="zf-CXXC"
                     /note="CXXC zinc finger domain; pfam02008"
                     /db_xref="CDD:366873"
     Region          67..128
                     /region_name="PHD_FXL19"
                     /note="PHD finger found in F-box and leucine-rich repeat
                     protein 19 (FBXL19); cd15645"
                     /db_xref="CDD:277115"
     Site            order(67,90..94,98,123)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277115"
     Region          358..400
                     /region_name="F-box_JHDM"
                     /note="F-box domain found in the JmjC domain-containing
                     histone demethylation protein (JHDM) family; cd22122"
                     /db_xref="CDD:438894"
     Site            order(361..362,364..366,368..369,371..373,375..376,
                     379..380,382..384,388)
                     /site_type="other"
                     /note="Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438894"
     Region          398..422
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          403..602
                     /region_name="AMN1"
                     /note="Antagonist of mitotic exit network protein 1;
                     cd09293"
                     /db_xref="CDD:187754"
     Region          423..445
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          447..470
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          471..510
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          511..535
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          536..560
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          566..590
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          591..623
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..631
                     /gene="FBXL19"
                     /coded_by="XM_061153258.1:340..2235"
                     /db_xref="GeneID:133063642"
ORIGIN      
        1 mssssrgpga garrrrtrcr rcracvrtec gdchfcrdmk kfggpgrmkq scllrqctap
       61 vlphtavcll cgeagkedtv egeeekfgls lmecticnei vhpgclkmgk aegvinaeip
      121 ncwecprctq egrtskdsge gpgrrradng eegaslgsgw klteepplpp ppprrkgplp
      181 agpppedvpg ppkrkereag nepptprkkv kggrerhlkk kpkpplasae gpavpspspq
      241 reklerfkrm cqllervpdt sssssdsdsd sdssgtslse deapgearng rrpargssge
      301 kenrggrrav rpggggplls wplgpapppr ppqlerhvvr ppprspepdt lplaagsdhp
      361 lpraawlrvf qhlgprelci cmrvcrtwsr wcydkrlwpr mdlsrrkslt ppmlsgvvrr
      421 qpraldlswt gvskkqlmwl lnrlqglqel vlsgcswlsv salgsaplpa lrlldlrwie
      481 dvkdsqlrel llpppdtkpg qtesrgrlqg vaelrlagle ltdaslrlll rhapqlsald
      541 lshcahvgdp svhlltapts plretlvhln lagchrltdh clplfrrcpr lrrldlrscr
      601 qlspeacarl aaagppgpfr cpeeklllkd s
//
LOCUS       XP_061009243            1710 aa            linear   MAM 02-DEC-2023
DEFINITION  histone-lysine N-methyltransferase SETD1A isoform X1 [Dama dama].
ACCESSION   XP_061009243
VERSION     XP_061009243.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153260.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1710
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1710
                     /product="histone-lysine N-methyltransferase SETD1A
                     isoform X1"
                     /calculated_mol_wt=186023
     Region          92..186
                     /region_name="RRM_Set1A"
                     /note="RNA recognition motif in vertebrate histone-lysine
                     N-methyltransferase Setd1A (Set1A); cd12548"
                     /db_xref="CDD:409964"
     Region          1428..1565
                     /region_name="N-SET"
                     /note="COMPASS (Complex proteins associated with Set1p)
                     component N; pfam11764"
                     /db_xref="CDD:463344"
     Region          1559..1706
                     /region_name="SET_SETD1"
                     /note="SET domain (including post-SET domain) found in SET
                     domain-containing protein 1 (SETD1) and similar proteins;
                     cd19169"
                     /db_xref="CDD:380946"
     Site            order(1580..1583,1600,1626..1631,1645..1650,1658..1660,
                     1669,1685..1690,1692..1695)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380946"
     Site            order(1580..1583,1626,1646..1650,1687,1692..1695)
                     /site_type="other"
                     /note="putative SAM binding site"
                     /db_xref="CDD:380946"
     Site            order(1652,1693,1695,1700)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380946"
     CDS             1..1710
                     /gene="SETD1A"
                     /coded_by="XM_061153260.1:665..5797"
                     /db_xref="GeneID:133063643"
ORIGIN      
        1 mdqegggdgq kapsfqwrny klivdpaldp alrrpsqkvy rydgihfsvn dskyipvedl
       61 qdprchvrsk nrdfslpvpk fkldefyigq iplkevtfar lndnvretfl kdmcrkygev
      121 eeveillhpr trkhlglarv lftstrgake tvknlhltsv mgniihaqld ikgqqrmkyy
      181 elivngsytp qtvptggkal sekfqgsgaa tettdsrrrs ssdtaafpag savvgtpgng
      241 tpcsqdtsfs ssrqdtpssf gqftpqssqg tpytsrgstp ysqdsaysss ttstsfkprr
      301 sensyqdsfs rrhfstssap tttsaaisat taataaaass sssslsssss sssssssshf
      361 rssdsnypay yeswnryqrh asypprratr deppgasfae ntaerftpsy tsylppepnr
      421 padqdyrppa seapppeppe pggggggggp spereearts prpasparsg spapettnes
      481 vpfaqhssld sriemllkeq rskfsflasd teeeeensst gpgardtgse apsgpghgpc
      541 tpppapasfe dvaptgsgep gatrespkan gqsqaspcss gedmeisddd rggspppapt
      601 ppqqpppppp pppppppyla slplgypphq payllpprpd gppppeyppp ppppphiydf
      661 vnslelmdrl gaqwggmpms fqmqtqmltr lhqlrqgkgl taasagppgg afgeaflpfp
      721 phqeaayglp yalyaqgqeg rgaysreayh lplpmaaepl pssvsgeear lppreegela
      781 egkalpsagt vgrvlatlvq emksimqrdl nrkmvenvaf gafdqwwesk eekakpfqna
      841 akqqakeedk ektklkepgl lslvdwaksg gttgieafaf gsglrgalrl psfkvkrkep
      901 seiseaseek rprpstpaee deddaereke vgepgrpgtk ppkrdeersk sqgkhrksfa
      961 ldsegeeasq esssekdeed eeedeedeer eeamdaakke teasdgedee sdssskcsly
     1021 adsdgendst sdsessssss ssssssssss sssssssses sseeeeeeeq pattpaassp
     1081 prdvptplsa paeepeperv edspvtplpe qeksparpag steepppsvp qpplepppgp
     1141 paptprpder psspipllpp pkkrrktvsf saveeapape pppaappqik spgpasrkap
     1201 ravertirnl pldhaslvks wpeevsrggr nraggrgrpa eeeeaepate vdlavladla
     1261 ltparrslpa lptaddseat etldeaerpg pllshilleh nyalavrppp ppppppstpa
     1321 prplepvlap aalfsspade vleapevvva eveepkqppq qqedgeeeee eeeesesses
     1381 ssssssdgeg atrrrslrsh trrrrppppp pppppptfdp rsefeqmtil ydiwnsgldl
     1441 edmsylrlty erllqqtsga dwlndthwvq htitnlstpk rkrrpqdgpr ehqtgsarse
     1501 gyypiskkek dryldvcpvs arqlegadtq gtnrvlserr seqrrllsai gtsaimdsdl
     1561 lklnqlkfrk kklrfgrsri hewglfamep iaademviey vgqnirqmva dmrekryvqe
     1621 gigssylfrv dhdtiidatk cgnlarfinh cctpncyakv itiesqkkiv iyskqpigvd
     1681 eeitydykfp lednkipclc gtescrgsln
//
LOCUS       XP_061009244            1710 aa            linear   MAM 02-DEC-2023
DEFINITION  histone-lysine N-methyltransferase SETD1A isoform X1 [Dama dama].
ACCESSION   XP_061009244
VERSION     XP_061009244.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153261.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1710
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1710
                     /product="histone-lysine N-methyltransferase SETD1A
                     isoform X1"
                     /calculated_mol_wt=186023
     Region          92..186
                     /region_name="RRM_Set1A"
                     /note="RNA recognition motif in vertebrate histone-lysine
                     N-methyltransferase Setd1A (Set1A); cd12548"
                     /db_xref="CDD:409964"
     Region          1428..1565
                     /region_name="N-SET"
                     /note="COMPASS (Complex proteins associated with Set1p)
                     component N; pfam11764"
                     /db_xref="CDD:463344"
     Region          1559..1706
                     /region_name="SET_SETD1"
                     /note="SET domain (including post-SET domain) found in SET
                     domain-containing protein 1 (SETD1) and similar proteins;
                     cd19169"
                     /db_xref="CDD:380946"
     Site            order(1580..1583,1600,1626..1631,1645..1650,1658..1660,
                     1669,1685..1690,1692..1695)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380946"
     Site            order(1580..1583,1626,1646..1650,1687,1692..1695)
                     /site_type="other"
                     /note="putative SAM binding site"
                     /db_xref="CDD:380946"
     Site            order(1652,1693,1695,1700)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380946"
     CDS             1..1710
                     /gene="SETD1A"
                     /coded_by="XM_061153261.1:626..5758"
                     /db_xref="GeneID:133063643"
ORIGIN      
        1 mdqegggdgq kapsfqwrny klivdpaldp alrrpsqkvy rydgihfsvn dskyipvedl
       61 qdprchvrsk nrdfslpvpk fkldefyigq iplkevtfar lndnvretfl kdmcrkygev
      121 eeveillhpr trkhlglarv lftstrgake tvknlhltsv mgniihaqld ikgqqrmkyy
      181 elivngsytp qtvptggkal sekfqgsgaa tettdsrrrs ssdtaafpag savvgtpgng
      241 tpcsqdtsfs ssrqdtpssf gqftpqssqg tpytsrgstp ysqdsaysss ttstsfkprr
      301 sensyqdsfs rrhfstssap tttsaaisat taataaaass sssslsssss sssssssshf
      361 rssdsnypay yeswnryqrh asypprratr deppgasfae ntaerftpsy tsylppepnr
      421 padqdyrppa seapppeppe pggggggggp spereearts prpasparsg spapettnes
      481 vpfaqhssld sriemllkeq rskfsflasd teeeeensst gpgardtgse apsgpghgpc
      541 tpppapasfe dvaptgsgep gatrespkan gqsqaspcss gedmeisddd rggspppapt
      601 ppqqpppppp pppppppyla slplgypphq payllpprpd gppppeyppp ppppphiydf
      661 vnslelmdrl gaqwggmpms fqmqtqmltr lhqlrqgkgl taasagppgg afgeaflpfp
      721 phqeaayglp yalyaqgqeg rgaysreayh lplpmaaepl pssvsgeear lppreegela
      781 egkalpsagt vgrvlatlvq emksimqrdl nrkmvenvaf gafdqwwesk eekakpfqna
      841 akqqakeedk ektklkepgl lslvdwaksg gttgieafaf gsglrgalrl psfkvkrkep
      901 seiseaseek rprpstpaee deddaereke vgepgrpgtk ppkrdeersk sqgkhrksfa
      961 ldsegeeasq esssekdeed eeedeedeer eeamdaakke teasdgedee sdssskcsly
     1021 adsdgendst sdsessssss ssssssssss sssssssses sseeeeeeeq pattpaassp
     1081 prdvptplsa paeepeperv edspvtplpe qeksparpag steepppsvp qpplepppgp
     1141 paptprpder psspipllpp pkkrrktvsf saveeapape pppaappqik spgpasrkap
     1201 ravertirnl pldhaslvks wpeevsrggr nraggrgrpa eeeeaepate vdlavladla
     1261 ltparrslpa lptaddseat etldeaerpg pllshilleh nyalavrppp ppppppstpa
     1321 prplepvlap aalfsspade vleapevvva eveepkqppq qqedgeeeee eeeesesses
     1381 ssssssdgeg atrrrslrsh trrrrppppp pppppptfdp rsefeqmtil ydiwnsgldl
     1441 edmsylrlty erllqqtsga dwlndthwvq htitnlstpk rkrrpqdgpr ehqtgsarse
     1501 gyypiskkek dryldvcpvs arqlegadtq gtnrvlserr seqrrllsai gtsaimdsdl
     1561 lklnqlkfrk kklrfgrsri hewglfamep iaademviey vgqnirqmva dmrekryvqe
     1621 gigssylfrv dhdtiidatk cgnlarfinh cctpncyakv itiesqkkiv iyskqpigvd
     1681 eeitydykfp lednkipclc gtescrgsln
//
LOCUS       XP_061009245            1710 aa            linear   MAM 02-DEC-2023
DEFINITION  histone-lysine N-methyltransferase SETD1A isoform X1 [Dama dama].
ACCESSION   XP_061009245
VERSION     XP_061009245.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153262.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1710
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1710
                     /product="histone-lysine N-methyltransferase SETD1A
                     isoform X1"
                     /calculated_mol_wt=186023
     Region          92..186
                     /region_name="RRM_Set1A"
                     /note="RNA recognition motif in vertebrate histone-lysine
                     N-methyltransferase Setd1A (Set1A); cd12548"
                     /db_xref="CDD:409964"
     Region          1428..1565
                     /region_name="N-SET"
                     /note="COMPASS (Complex proteins associated with Set1p)
                     component N; pfam11764"
                     /db_xref="CDD:463344"
     Region          1559..1706
                     /region_name="SET_SETD1"
                     /note="SET domain (including post-SET domain) found in SET
                     domain-containing protein 1 (SETD1) and similar proteins;
                     cd19169"
                     /db_xref="CDD:380946"
     Site            order(1580..1583,1600,1626..1631,1645..1650,1658..1660,
                     1669,1685..1690,1692..1695)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380946"
     Site            order(1580..1583,1626,1646..1650,1687,1692..1695)
                     /site_type="other"
                     /note="putative SAM binding site"
                     /db_xref="CDD:380946"
     Site            order(1652,1693,1695,1700)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380946"
     CDS             1..1710
                     /gene="SETD1A"
                     /coded_by="XM_061153262.1:100..5232"
                     /db_xref="GeneID:133063643"
ORIGIN      
        1 mdqegggdgq kapsfqwrny klivdpaldp alrrpsqkvy rydgihfsvn dskyipvedl
       61 qdprchvrsk nrdfslpvpk fkldefyigq iplkevtfar lndnvretfl kdmcrkygev
      121 eeveillhpr trkhlglarv lftstrgake tvknlhltsv mgniihaqld ikgqqrmkyy
      181 elivngsytp qtvptggkal sekfqgsgaa tettdsrrrs ssdtaafpag savvgtpgng
      241 tpcsqdtsfs ssrqdtpssf gqftpqssqg tpytsrgstp ysqdsaysss ttstsfkprr
      301 sensyqdsfs rrhfstssap tttsaaisat taataaaass sssslsssss sssssssshf
      361 rssdsnypay yeswnryqrh asypprratr deppgasfae ntaerftpsy tsylppepnr
      421 padqdyrppa seapppeppe pggggggggp spereearts prpasparsg spapettnes
      481 vpfaqhssld sriemllkeq rskfsflasd teeeeensst gpgardtgse apsgpghgpc
      541 tpppapasfe dvaptgsgep gatrespkan gqsqaspcss gedmeisddd rggspppapt
      601 ppqqpppppp pppppppyla slplgypphq payllpprpd gppppeyppp ppppphiydf
      661 vnslelmdrl gaqwggmpms fqmqtqmltr lhqlrqgkgl taasagppgg afgeaflpfp
      721 phqeaayglp yalyaqgqeg rgaysreayh lplpmaaepl pssvsgeear lppreegela
      781 egkalpsagt vgrvlatlvq emksimqrdl nrkmvenvaf gafdqwwesk eekakpfqna
      841 akqqakeedk ektklkepgl lslvdwaksg gttgieafaf gsglrgalrl psfkvkrkep
      901 seiseaseek rprpstpaee deddaereke vgepgrpgtk ppkrdeersk sqgkhrksfa
      961 ldsegeeasq esssekdeed eeedeedeer eeamdaakke teasdgedee sdssskcsly
     1021 adsdgendst sdsessssss ssssssssss sssssssses sseeeeeeeq pattpaassp
     1081 prdvptplsa paeepeperv edspvtplpe qeksparpag steepppsvp qpplepppgp
     1141 paptprpder psspipllpp pkkrrktvsf saveeapape pppaappqik spgpasrkap
     1201 ravertirnl pldhaslvks wpeevsrggr nraggrgrpa eeeeaepate vdlavladla
     1261 ltparrslpa lptaddseat etldeaerpg pllshilleh nyalavrppp ppppppstpa
     1321 prplepvlap aalfsspade vleapevvva eveepkqppq qqedgeeeee eeeesesses
     1381 ssssssdgeg atrrrslrsh trrrrppppp pppppptfdp rsefeqmtil ydiwnsgldl
     1441 edmsylrlty erllqqtsga dwlndthwvq htitnlstpk rkrrpqdgpr ehqtgsarse
     1501 gyypiskkek dryldvcpvs arqlegadtq gtnrvlserr seqrrllsai gtsaimdsdl
     1561 lklnqlkfrk kklrfgrsri hewglfamep iaademviey vgqnirqmva dmrekryvqe
     1621 gigssylfrv dhdtiidatk cgnlarfinh cctpncyakv itiesqkkiv iyskqpigvd
     1681 eeitydykfp lednkipclc gtescrgsln
//
LOCUS       XP_061009246            1710 aa            linear   MAM 02-DEC-2023
DEFINITION  histone-lysine N-methyltransferase SETD1A isoform X1 [Dama dama].
ACCESSION   XP_061009246
VERSION     XP_061009246.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153263.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1710
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1710
                     /product="histone-lysine N-methyltransferase SETD1A
                     isoform X1"
                     /calculated_mol_wt=186023
     Region          92..186
                     /region_name="RRM_Set1A"
                     /note="RNA recognition motif in vertebrate histone-lysine
                     N-methyltransferase Setd1A (Set1A); cd12548"
                     /db_xref="CDD:409964"
     Region          1428..1565
                     /region_name="N-SET"
                     /note="COMPASS (Complex proteins associated with Set1p)
                     component N; pfam11764"
                     /db_xref="CDD:463344"
     Region          1559..1706
                     /region_name="SET_SETD1"
                     /note="SET domain (including post-SET domain) found in SET
                     domain-containing protein 1 (SETD1) and similar proteins;
                     cd19169"
                     /db_xref="CDD:380946"
     Site            order(1580..1583,1600,1626..1631,1645..1650,1658..1660,
                     1669,1685..1690,1692..1695)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380946"
     Site            order(1580..1583,1626,1646..1650,1687,1692..1695)
                     /site_type="other"
                     /note="putative SAM binding site"
                     /db_xref="CDD:380946"
     Site            order(1652,1693,1695,1700)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380946"
     CDS             1..1710
                     /gene="SETD1A"
                     /coded_by="XM_061153263.1:54..5186"
                     /db_xref="GeneID:133063643"
ORIGIN      
        1 mdqegggdgq kapsfqwrny klivdpaldp alrrpsqkvy rydgihfsvn dskyipvedl
       61 qdprchvrsk nrdfslpvpk fkldefyigq iplkevtfar lndnvretfl kdmcrkygev
      121 eeveillhpr trkhlglarv lftstrgake tvknlhltsv mgniihaqld ikgqqrmkyy
      181 elivngsytp qtvptggkal sekfqgsgaa tettdsrrrs ssdtaafpag savvgtpgng
      241 tpcsqdtsfs ssrqdtpssf gqftpqssqg tpytsrgstp ysqdsaysss ttstsfkprr
      301 sensyqdsfs rrhfstssap tttsaaisat taataaaass sssslsssss sssssssshf
      361 rssdsnypay yeswnryqrh asypprratr deppgasfae ntaerftpsy tsylppepnr
      421 padqdyrppa seapppeppe pggggggggp spereearts prpasparsg spapettnes
      481 vpfaqhssld sriemllkeq rskfsflasd teeeeensst gpgardtgse apsgpghgpc
      541 tpppapasfe dvaptgsgep gatrespkan gqsqaspcss gedmeisddd rggspppapt
      601 ppqqpppppp pppppppyla slplgypphq payllpprpd gppppeyppp ppppphiydf
      661 vnslelmdrl gaqwggmpms fqmqtqmltr lhqlrqgkgl taasagppgg afgeaflpfp
      721 phqeaayglp yalyaqgqeg rgaysreayh lplpmaaepl pssvsgeear lppreegela
      781 egkalpsagt vgrvlatlvq emksimqrdl nrkmvenvaf gafdqwwesk eekakpfqna
      841 akqqakeedk ektklkepgl lslvdwaksg gttgieafaf gsglrgalrl psfkvkrkep
      901 seiseaseek rprpstpaee deddaereke vgepgrpgtk ppkrdeersk sqgkhrksfa
      961 ldsegeeasq esssekdeed eeedeedeer eeamdaakke teasdgedee sdssskcsly
     1021 adsdgendst sdsessssss ssssssssss sssssssses sseeeeeeeq pattpaassp
     1081 prdvptplsa paeepeperv edspvtplpe qeksparpag steepppsvp qpplepppgp
     1141 paptprpder psspipllpp pkkrrktvsf saveeapape pppaappqik spgpasrkap
     1201 ravertirnl pldhaslvks wpeevsrggr nraggrgrpa eeeeaepate vdlavladla
     1261 ltparrslpa lptaddseat etldeaerpg pllshilleh nyalavrppp ppppppstpa
     1321 prplepvlap aalfsspade vleapevvva eveepkqppq qqedgeeeee eeeesesses
     1381 ssssssdgeg atrrrslrsh trrrrppppp pppppptfdp rsefeqmtil ydiwnsgldl
     1441 edmsylrlty erllqqtsga dwlndthwvq htitnlstpk rkrrpqdgpr ehqtgsarse
     1501 gyypiskkek dryldvcpvs arqlegadtq gtnrvlserr seqrrllsai gtsaimdsdl
     1561 lklnqlkfrk kklrfgrsri hewglfamep iaademviey vgqnirqmva dmrekryvqe
     1621 gigssylfrv dhdtiidatk cgnlarfinh cctpncyakv itiesqkkiv iyskqpigvd
     1681 eeitydykfp lednkipclc gtescrgsln
//
LOCUS       XP_061009247            1710 aa            linear   MAM 02-DEC-2023
DEFINITION  histone-lysine N-methyltransferase SETD1A isoform X1 [Dama dama].
ACCESSION   XP_061009247
VERSION     XP_061009247.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153264.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1710
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1710
                     /product="histone-lysine N-methyltransferase SETD1A
                     isoform X1"
                     /calculated_mol_wt=186023
     Region          92..186
                     /region_name="RRM_Set1A"
                     /note="RNA recognition motif in vertebrate histone-lysine
                     N-methyltransferase Setd1A (Set1A); cd12548"
                     /db_xref="CDD:409964"
     Region          1428..1565
                     /region_name="N-SET"
                     /note="COMPASS (Complex proteins associated with Set1p)
                     component N; pfam11764"
                     /db_xref="CDD:463344"
     Region          1559..1706
                     /region_name="SET_SETD1"
                     /note="SET domain (including post-SET domain) found in SET
                     domain-containing protein 1 (SETD1) and similar proteins;
                     cd19169"
                     /db_xref="CDD:380946"
     Site            order(1580..1583,1600,1626..1631,1645..1650,1658..1660,
                     1669,1685..1690,1692..1695)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380946"
     Site            order(1580..1583,1626,1646..1650,1687,1692..1695)
                     /site_type="other"
                     /note="putative SAM binding site"
                     /db_xref="CDD:380946"
     Site            order(1652,1693,1695,1700)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380946"
     CDS             1..1710
                     /gene="SETD1A"
                     /coded_by="XM_061153264.1:88..5220"
                     /db_xref="GeneID:133063643"
ORIGIN      
        1 mdqegggdgq kapsfqwrny klivdpaldp alrrpsqkvy rydgihfsvn dskyipvedl
       61 qdprchvrsk nrdfslpvpk fkldefyigq iplkevtfar lndnvretfl kdmcrkygev
      121 eeveillhpr trkhlglarv lftstrgake tvknlhltsv mgniihaqld ikgqqrmkyy
      181 elivngsytp qtvptggkal sekfqgsgaa tettdsrrrs ssdtaafpag savvgtpgng
      241 tpcsqdtsfs ssrqdtpssf gqftpqssqg tpytsrgstp ysqdsaysss ttstsfkprr
      301 sensyqdsfs rrhfstssap tttsaaisat taataaaass sssslsssss sssssssshf
      361 rssdsnypay yeswnryqrh asypprratr deppgasfae ntaerftpsy tsylppepnr
      421 padqdyrppa seapppeppe pggggggggp spereearts prpasparsg spapettnes
      481 vpfaqhssld sriemllkeq rskfsflasd teeeeensst gpgardtgse apsgpghgpc
      541 tpppapasfe dvaptgsgep gatrespkan gqsqaspcss gedmeisddd rggspppapt
      601 ppqqpppppp pppppppyla slplgypphq payllpprpd gppppeyppp ppppphiydf
      661 vnslelmdrl gaqwggmpms fqmqtqmltr lhqlrqgkgl taasagppgg afgeaflpfp
      721 phqeaayglp yalyaqgqeg rgaysreayh lplpmaaepl pssvsgeear lppreegela
      781 egkalpsagt vgrvlatlvq emksimqrdl nrkmvenvaf gafdqwwesk eekakpfqna
      841 akqqakeedk ektklkepgl lslvdwaksg gttgieafaf gsglrgalrl psfkvkrkep
      901 seiseaseek rprpstpaee deddaereke vgepgrpgtk ppkrdeersk sqgkhrksfa
      961 ldsegeeasq esssekdeed eeedeedeer eeamdaakke teasdgedee sdssskcsly
     1021 adsdgendst sdsessssss ssssssssss sssssssses sseeeeeeeq pattpaassp
     1081 prdvptplsa paeepeperv edspvtplpe qeksparpag steepppsvp qpplepppgp
     1141 paptprpder psspipllpp pkkrrktvsf saveeapape pppaappqik spgpasrkap
     1201 ravertirnl pldhaslvks wpeevsrggr nraggrgrpa eeeeaepate vdlavladla
     1261 ltparrslpa lptaddseat etldeaerpg pllshilleh nyalavrppp ppppppstpa
     1321 prplepvlap aalfsspade vleapevvva eveepkqppq qqedgeeeee eeeesesses
     1381 ssssssdgeg atrrrslrsh trrrrppppp pppppptfdp rsefeqmtil ydiwnsgldl
     1441 edmsylrlty erllqqtsga dwlndthwvq htitnlstpk rkrrpqdgpr ehqtgsarse
     1501 gyypiskkek dryldvcpvs arqlegadtq gtnrvlserr seqrrllsai gtsaimdsdl
     1561 lklnqlkfrk kklrfgrsri hewglfamep iaademviey vgqnirqmva dmrekryvqe
     1621 gigssylfrv dhdtiidatk cgnlarfinh cctpncyakv itiesqkkiv iyskqpigvd
     1681 eeitydykfp lednkipclc gtescrgsln
//
LOCUS       XP_061009248            1710 aa            linear   MAM 02-DEC-2023
DEFINITION  histone-lysine N-methyltransferase SETD1A isoform X1 [Dama dama].
ACCESSION   XP_061009248
VERSION     XP_061009248.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153265.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1710
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1710
                     /product="histone-lysine N-methyltransferase SETD1A
                     isoform X1"
                     /calculated_mol_wt=186023
     Region          92..186
                     /region_name="RRM_Set1A"
                     /note="RNA recognition motif in vertebrate histone-lysine
                     N-methyltransferase Setd1A (Set1A); cd12548"
                     /db_xref="CDD:409964"
     Region          1428..1565
                     /region_name="N-SET"
                     /note="COMPASS (Complex proteins associated with Set1p)
                     component N; pfam11764"
                     /db_xref="CDD:463344"
     Region          1559..1706
                     /region_name="SET_SETD1"
                     /note="SET domain (including post-SET domain) found in SET
                     domain-containing protein 1 (SETD1) and similar proteins;
                     cd19169"
                     /db_xref="CDD:380946"
     Site            order(1580..1583,1600,1626..1631,1645..1650,1658..1660,
                     1669,1685..1690,1692..1695)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380946"
     Site            order(1580..1583,1626,1646..1650,1687,1692..1695)
                     /site_type="other"
                     /note="putative SAM binding site"
                     /db_xref="CDD:380946"
     Site            order(1652,1693,1695,1700)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380946"
     CDS             1..1710
                     /gene="SETD1A"
                     /coded_by="XM_061153265.1:29..5161"
                     /db_xref="GeneID:133063643"
ORIGIN      
        1 mdqegggdgq kapsfqwrny klivdpaldp alrrpsqkvy rydgihfsvn dskyipvedl
       61 qdprchvrsk nrdfslpvpk fkldefyigq iplkevtfar lndnvretfl kdmcrkygev
      121 eeveillhpr trkhlglarv lftstrgake tvknlhltsv mgniihaqld ikgqqrmkyy
      181 elivngsytp qtvptggkal sekfqgsgaa tettdsrrrs ssdtaafpag savvgtpgng
      241 tpcsqdtsfs ssrqdtpssf gqftpqssqg tpytsrgstp ysqdsaysss ttstsfkprr
      301 sensyqdsfs rrhfstssap tttsaaisat taataaaass sssslsssss sssssssshf
      361 rssdsnypay yeswnryqrh asypprratr deppgasfae ntaerftpsy tsylppepnr
      421 padqdyrppa seapppeppe pggggggggp spereearts prpasparsg spapettnes
      481 vpfaqhssld sriemllkeq rskfsflasd teeeeensst gpgardtgse apsgpghgpc
      541 tpppapasfe dvaptgsgep gatrespkan gqsqaspcss gedmeisddd rggspppapt
      601 ppqqpppppp pppppppyla slplgypphq payllpprpd gppppeyppp ppppphiydf
      661 vnslelmdrl gaqwggmpms fqmqtqmltr lhqlrqgkgl taasagppgg afgeaflpfp
      721 phqeaayglp yalyaqgqeg rgaysreayh lplpmaaepl pssvsgeear lppreegela
      781 egkalpsagt vgrvlatlvq emksimqrdl nrkmvenvaf gafdqwwesk eekakpfqna
      841 akqqakeedk ektklkepgl lslvdwaksg gttgieafaf gsglrgalrl psfkvkrkep
      901 seiseaseek rprpstpaee deddaereke vgepgrpgtk ppkrdeersk sqgkhrksfa
      961 ldsegeeasq esssekdeed eeedeedeer eeamdaakke teasdgedee sdssskcsly
     1021 adsdgendst sdsessssss ssssssssss sssssssses sseeeeeeeq pattpaassp
     1081 prdvptplsa paeepeperv edspvtplpe qeksparpag steepppsvp qpplepppgp
     1141 paptprpder psspipllpp pkkrrktvsf saveeapape pppaappqik spgpasrkap
     1201 ravertirnl pldhaslvks wpeevsrggr nraggrgrpa eeeeaepate vdlavladla
     1261 ltparrslpa lptaddseat etldeaerpg pllshilleh nyalavrppp ppppppstpa
     1321 prplepvlap aalfsspade vleapevvva eveepkqppq qqedgeeeee eeeesesses
     1381 ssssssdgeg atrrrslrsh trrrrppppp pppppptfdp rsefeqmtil ydiwnsgldl
     1441 edmsylrlty erllqqtsga dwlndthwvq htitnlstpk rkrrpqdgpr ehqtgsarse
     1501 gyypiskkek dryldvcpvs arqlegadtq gtnrvlserr seqrrllsai gtsaimdsdl
     1561 lklnqlkfrk kklrfgrsri hewglfamep iaademviey vgqnirqmva dmrekryvqe
     1621 gigssylfrv dhdtiidatk cgnlarfinh cctpncyakv itiesqkkiv iyskqpigvd
     1681 eeitydykfp lednkipclc gtescrgsln
//
LOCUS       XP_061009249            1692 aa            linear   MAM 02-DEC-2023
DEFINITION  histone-lysine N-methyltransferase SETD1A isoform X2 [Dama dama].
ACCESSION   XP_061009249
VERSION     XP_061009249.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153266.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1692
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1692
                     /product="histone-lysine N-methyltransferase SETD1A
                     isoform X2"
                     /calculated_mol_wt=184133
     Region          92..186
                     /region_name="RRM_Set1A"
                     /note="RNA recognition motif in vertebrate histone-lysine
                     N-methyltransferase Setd1A (Set1A); cd12548"
                     /db_xref="CDD:409964"
     Region          1410..1547
                     /region_name="N-SET"
                     /note="COMPASS (Complex proteins associated with Set1p)
                     component N; pfam11764"
                     /db_xref="CDD:463344"
     Region          1541..1688
                     /region_name="SET_SETD1"
                     /note="SET domain (including post-SET domain) found in SET
                     domain-containing protein 1 (SETD1) and similar proteins;
                     cd19169"
                     /db_xref="CDD:380946"
     Site            order(1562..1565,1582,1608..1613,1627..1632,1640..1642,
                     1651,1667..1672,1674..1677)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380946"
     Site            order(1562..1565,1608,1628..1632,1669,1674..1677)
                     /site_type="other"
                     /note="putative SAM binding site"
                     /db_xref="CDD:380946"
     Site            order(1634,1675,1677,1682)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380946"
     CDS             1..1692
                     /gene="SETD1A"
                     /coded_by="XM_061153266.1:665..5743"
                     /db_xref="GeneID:133063643"
ORIGIN      
        1 mdqegggdgq kapsfqwrny klivdpaldp alrrpsqkvy rydgihfsvn dskyipvedl
       61 qdprchvrsk nrdfslpvpk fkldefyigq iplkevtfar lndnvretfl kdmcrkygev
      121 eeveillhpr trkhlglarv lftstrgake tvknlhltsv mgniihaqld ikgqqrmkyy
      181 elivngsytp qtvptggkal sekfqgsgaa tettdsrrrs ssdtaafpag savvgtpgng
      241 tpcsqdtsfs ssrqdtpssf gqftpqssqg tpytsrgstp ysqdsaysss ttstsfkprr
      301 sensyqdsfs rrhfstssap tttsaaisat taataaaass sssslsssss sssssssshf
      361 rssdsnypay yeswnryqrh asypprratr deppgasfae ntaerftpsy tsylppepnr
      421 padqdyrppa seapppeppe pggggggggp spereearts prpasparsg spapettnes
      481 vpfaqhssld sriemllkeq rskfsflasd teeeeensst gpgardtgse apsgpghgpc
      541 tpppapasfe dvaptgsgep gatrespkan gqsqaspcss gedmeisddd rggspppapt
      601 ppqqpppppp pppppppyla slplgypphq payllpprpd gppppeyppp ppppphiydf
      661 vnslelmdrl gaqwggmpms fqmqtqmltr lhqlrqgkgl taasagppgg afgeaflpfp
      721 phqeaayglp yalyaqgqeg rgaysreayh lplpmaaepl pssvsgeear lppreegela
      781 egkalpsagt vgrvlatlvq emksimqrdl nrkmvenvaf gafdqwwesk eekakpfqna
      841 akqqakeedk ektklkepgl lslvdwaksg gttgieafaf gsglrgalrl psfkvkrkep
      901 seiseaseek rprpstpaee deddaereke vgepgrpgtk ppkrdeersk sqgkhrksfa
      961 ldsegeeasq esssekdeed eeedeedeer eeamdaakke teasddgend stsdsessss
     1021 ssssssssss ssssssssss essseeeeee eqpattpaas spprdvptpl sapaeepepe
     1081 rvedspvtpl peqeksparp agsteeppps vpqppleppp gppaptprpd erpsspipll
     1141 pppkkrrktv sfsaveeapa pepppaappq ikspgpasrk apravertir nlpldhaslv
     1201 kswpeevsrg grnraggrgr paeeeeaepa tevdlavlad laltparrsl palptaddse
     1261 atetldeaer pgpllshill ehnyalavrp ppppppppst paprplepvl apaalfsspa
     1321 devleapevv vaeveepkqp pqqqedgeee eeeeeesess esssssssdg egatrrrslr
     1381 shtrrrrppp pppppppptf dprsefeqmt ilydiwnsgl dledmsylrl tyerllqqts
     1441 gadwlndthw vqhtitnlst pkrkrrpqdg prehqtgsar segyypiskk ekdryldvcp
     1501 vsarqlegad tqgtnrvlse rrseqrrlls aigtsaimds dllklnqlkf rkkklrfgrs
     1561 rihewglfam epiaademvi eyvgqnirqm vadmrekryv qegigssylf rvdhdtiida
     1621 tkcgnlarfi nhcctpncya kvitiesqkk iviyskqpig vdeeitydyk fplednkipc
     1681 lcgtescrgs ln
//
LOCUS       XP_061009250             368 aa            linear   MAM 02-DEC-2023
DEFINITION  3 beta-hydroxysteroid dehydrogenase type 7 isoform X1 [Dama dama].
ACCESSION   XP_061009250
VERSION     XP_061009250.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153267.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..368
                     /product="3 beta-hydroxysteroid dehydrogenase type 7
                     isoform X1"
                     /calculated_mol_wt=40934
     Region          11..361
                     /region_name="3b-HSD_HSDB1_like_SDR_e"
                     /note="human 3beta-HSD (hydroxysteroid dehydrogenase) and
                     HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs;
                     cd09811"
                     /db_xref="CDD:187671"
     Site            order(16,18..21,43..45,86..88,104,127..129,159,163,
                     191..194)
                     /site_type="other"
                     /note="putative NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187671"
     Site            order(105,129,159,163)
                     /site_type="active"
                     /db_xref="CDD:187671"
     Site            order(129,159,193,206,216,221)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:187671"
     CDS             1..368
                     /gene="HSD3B7"
                     /coded_by="XM_061153267.1:149..1255"
                     /db_xref="GeneID:133063644"
ORIGIN      
        1 mansaqtqel vylvtggcgf lgehvvrmll qreprlrelr ifdlhlgpwl eelktgpvqv
       61 taiqgdvtqa hevaaavaga hvvihtaglv dvfgktspet ihevnvqgtq nvieacvqtg
      121 trfliytssm evvgpnikgq pfyrgnentp yeavhrhpyp cskalaerlv leangrevlg
      181 glplvtcalr ptgiygeghq imkdfyyqgl rlggrlfrai pasvehgrvy vgnvawmhvl
      241 varelehraa lmggqvyfcy dnspyksyed fnmeflgpcg lrlvgtrplm pywllvllaa
      301 lntllqwllr plllyaplln pytlavantt ftvstdkarr hfgyeplfsw eesrtrtirw
      361 vqtadgsg
//
LOCUS       XP_061009251             368 aa            linear   MAM 02-DEC-2023
DEFINITION  3 beta-hydroxysteroid dehydrogenase type 7 isoform X1 [Dama dama].
ACCESSION   XP_061009251
VERSION     XP_061009251.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153268.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..368
                     /product="3 beta-hydroxysteroid dehydrogenase type 7
                     isoform X1"
                     /calculated_mol_wt=40934
     Region          11..361
                     /region_name="3b-HSD_HSDB1_like_SDR_e"
                     /note="human 3beta-HSD (hydroxysteroid dehydrogenase) and
                     HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs;
                     cd09811"
                     /db_xref="CDD:187671"
     Site            order(16,18..21,43..45,86..88,104,127..129,159,163,
                     191..194)
                     /site_type="other"
                     /note="putative NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187671"
     Site            order(105,129,159,163)
                     /site_type="active"
                     /db_xref="CDD:187671"
     Site            order(129,159,193,206,216,221)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:187671"
     CDS             1..368
                     /gene="HSD3B7"
                     /coded_by="XM_061153268.1:110..1216"
                     /db_xref="GeneID:133063644"
ORIGIN      
        1 mansaqtqel vylvtggcgf lgehvvrmll qreprlrelr ifdlhlgpwl eelktgpvqv
       61 taiqgdvtqa hevaaavaga hvvihtaglv dvfgktspet ihevnvqgtq nvieacvqtg
      121 trfliytssm evvgpnikgq pfyrgnentp yeavhrhpyp cskalaerlv leangrevlg
      181 glplvtcalr ptgiygeghq imkdfyyqgl rlggrlfrai pasvehgrvy vgnvawmhvl
      241 varelehraa lmggqvyfcy dnspyksyed fnmeflgpcg lrlvgtrplm pywllvllaa
      301 lntllqwllr plllyaplln pytlavantt ftvstdkarr hfgyeplfsw eesrtrtirw
      361 vqtadgsg
//
LOCUS       XP_061009253             287 aa            linear   MAM 02-DEC-2023
DEFINITION  3 beta-hydroxysteroid dehydrogenase type 7 isoform X2 [Dama dama].
ACCESSION   XP_061009253
VERSION     XP_061009253.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153270.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..287
                     /product="3 beta-hydroxysteroid dehydrogenase type 7
                     isoform X2"
                     /calculated_mol_wt=31469
     Region          11..>231
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(16,18..19,21,43..45,86..88,127..129,159,163,
                     191..194)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(105,129,159,163)
                     /site_type="active"
                     /db_xref="CDD:187535"
     CDS             1..287
                     /gene="HSD3B7"
                     /coded_by="XM_061153270.1:150..1013"
                     /db_xref="GeneID:133063644"
ORIGIN      
        1 mansaqtqel vylvtggcgf lgehvvrmll qreprlrelr ifdlhlgpwl eelktgpvqv
       61 taiqgdvtqa hevaaavaga hvvihtaglv dvfgktspet ihevnvqgtq nvieacvqtg
      121 trfliytssm evvgpnikgq pfyrgnentp yeavhrhpyp cskalaerlv leangrevlg
      181 glplvtcalr ptgiygeghq imkdfyyqgl rlggrlfrai pasvehgrvy vtwpgctcww
      241 pgslntelps wvarctsatt trptratrts twsswvpadc gwwapah
//
LOCUS       XP_061009254             295 aa            linear   MAM 02-DEC-2023
DEFINITION  protein orai-3 [Dama dama].
ACCESSION   XP_061009254
VERSION     XP_061009254.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153271.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..295
                     /product="protein orai-3"
                     /calculated_mol_wt=31357
     Region          48..276
                     /region_name="Orai-1"
                     /note="Mediator of CRAC channel activity; pfam07856"
                     /db_xref="CDD:462291"
     Region          <180..295
                     /region_name="PHA03378"
                     /note="EBNA-3B; Provisional"
                     /db_xref="CDD:223065"
     CDS             1..295
                     /gene="ORAI3"
                     /coded_by="XM_061153271.1:218..1105"
                     /db_xref="GeneID:133063645"
ORIGIN      
        1 mkggegdpge qaplnpeaes pagsatyref vhrgyldlmg asqhslrals wrrlylsrak
       61 lkassrtsal lsgfamvamv evqlershey ppgllvafsa cttvlvavhl falmvstcll
      121 phieavsnih nlnsvhqsph qrlhryvela wgfstalgtf lflaevvlvg wvkfvpigap
      181 lgtsgsmgpa sqlpetlppv atslgpaskp sstsvapsqa eppeacpprq acdggaahgp
      241 gwqaamasta imvpvglvfv afalhfyrsl vahktdrhkq eleelsrlqg elqav
//
LOCUS       XP_061009255             297 aa            linear   MAM 02-DEC-2023
DEFINITION  syntaxin-4 [Dama dama].
ACCESSION   XP_061009255
VERSION     XP_061009255.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153272.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..297
                     /product="syntaxin-4"
                     /calculated_mol_wt=34091
     Region          39..189
                     /region_name="SynN"
                     /note="Syntaxin N-terminus domain; syntaxins are nervous
                     system-specific proteins implicated in the docking of
                     synaptic vesicles with the presynaptic plasma membrane;
                     they are a family of receptors for intracellular transport
                     vesicles; each target membrane may...; cd00179"
                     /db_xref="CDD:238105"
     Site            order(42,49,121..122,125..126,129,132..133,139,142,174)
                     /site_type="active"
                     /note="nSec1 interaction sites [active]"
                     /db_xref="CDD:238105"
     Site            order(69,80,83..84,91,95,98,105,127,132,135,141,148..149,
                     152..153,155..156,159,186)
                     /site_type="active"
                     /note="interdomain interaction site [active]"
                     /db_xref="CDD:238105"
     Site            order(166..176,185..189)
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238105"
     Region          199..260
                     /region_name="SNARE"
                     /note="SNARE motif; cl22856"
                     /db_xref="CDD:473982"
     Site            order(231,238,241)
                     /site_type="other"
                     /note="flanking leucine-zipper layers"
                     /db_xref="CDD:277192"
     Site            234
                     /site_type="active"
                     /note="zero layer [active]"
                     /db_xref="CDD:277192"
     CDS             1..297
                     /gene="STX4"
                     /coded_by="XM_061153272.1:240..1133"
                     /db_xref="GeneID:133063646"
ORIGIN      
        1 mrdrthelrq gddssddedk ervalvvhpg tarlgspdde ffqkvgtirq tivklenkvr
       61 elekqqvtil atplpeesmk qdlqnlrdei kqlgrdiraq lkaiepqkee adenynsvnt
      121 rmrktqhgil sqqfvelink cnsmqseyre knverirrql kitnagmvsd eeleqmldsg
      181 qsevfvsnil kdtqvtrqal neisarhsei qqlersirel heiftflate veiqgeminr
      241 ieknilssad yvergqehvk valenqkkar kkkvliaicv siivlilvvv ivistlv
//
LOCUS       XP_061009256            1816 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 646 [Dama dama].
ACCESSION   XP_061009256
VERSION     XP_061009256.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153273.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1816
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1816
                     /product="zinc finger protein 646"
                     /calculated_mol_wt=198747
     Region          10..31
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(15,17,19,21..22,25..26,29,54,56,60..61,64..65,68,81,
                     83,85,87..88,91..92,95)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          49..69
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(49,52,65,69)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          74..96
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          76..96
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <237..418
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          240..260
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(245,247,249,251..252,255..256,259,272,274,278..279,
                     282..283,286,300,302,304,306..307,310..311,314)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          267..287
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(267,270,283,287)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          295..315
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          375..395
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(380,382,384,386..387,390..391,394,407,409,413..414,
                     417..418,421,471,473,475,477..478,481..482,485)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          402..422
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(402,405,418,422)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          466..486
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          493..513
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          576..596
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(581,583,585,587..588,591..592,595,621,623,627..628,
                     631..632,635,648,650,652,654..655,658..659)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          616..636
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(616,619,632,636)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          643..660
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          820..840
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(825,827,829,831..832,835..836,839,852,854,858..859,
                     862..863,866,885,887,889,891..892,895..896)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          847..867
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(847,850,863,867)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          880..898
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1053..1073
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1053,1056,1069,1073)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          1080..1100
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1191..1211
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1218..1238
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1223,1225,1227,1229..1230,1233..1234,1237,1251,1253,
                     1257..1258,1261..1262,1265,1292,1294,1296,1298..1299,
                     1302..1303,1306)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          1246..1266
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1246,1249,1262,1266)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          1287..1307
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1314..1334
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1520..1540
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1525,1527,1529,1531..1532,1535..1536,1539,1552,1554,
                     1558..1559,1562..1563,1566,1580,1582,1584,1586..1587,
                     1590..1591,1594)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          1547..1567
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1547,1550,1563,1567)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          1575..1595
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1663..1683
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1668,1670,1672,1674..1675,1678..1679,1682,1695,1697,
                     1701..1702,1705..1706,1709,1723,1725,1727,1729..1730,
                     1733..1734,1737)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          1690..1710
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1690,1693,1706,1710)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          1718..1738
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1747..1767
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..1816
                     /gene="ZNF646"
                     /coded_by="XM_061153273.1:529..5979"
                     /db_xref="GeneID:133063647"
ORIGIN      
        1 medtptslsc sdcqrhfpsl pellrhrell hpsssqgsea dsiprpyrcq qcgrgyrhpg
       61 slvnhrrthe tglfpcttcg kdftnpmalk shmrthapeg rrrrrpprpk eatprlqget
      121 vstdswaqrl dpgegwenqk khieetsgce sgpdpraalg twedlptrqr egwenqpdpe
      181 egvegwgptt nsardtplpt passllsnle qylaesvvnf tggqeptqsa paeeerrykc
      241 sqcgktykha gsltnhrqsh tlgvypcaic fkefsnlmal knhsrlhaqy rpyqcphcpr
      301 afrlprelle hqqshegesq eqpweekgmp ttnghtdess qdqlpgtqml ngsgelstsg
      361 eledigleey rpfrcgdcgr tyrhagslin hrkshqtgvy pcsicskqlf naaalknhvr
      421 ahhrprqgag edgqpsvlpa plplaestrk eaeaptttld hrpykcnecg rayrhrgslv
      481 nhrhshrtge yqcslcprky pnlmalrnhv rvhckaarrs tgpgaegpps hlkvevppdp
      541 vgpettllcd qgpgckheeg apavppaadr tapqicsmcg mlfedsesle hhsrthgega
      601 qsrtearesp prvfacrdcg ksyrhsgsli nhrqthqtgd fscgacakhf htmaamknhl
      661 rrhsrrrsrr hrrragsagg ggeakppsdg nwapepvdsv glgcprdssr aspsgakgnm
      721 essggclqaa aerdncgler neacfqgdke srgaeegler meacfldnvd ipgteessgt
      781 rfcdglpgvk edqkpapgqp sspsrsassa gwpaevshtc sdcghsfpha tgllshrpch
      841 ppgiyqcslc pkefdslpal rshfqnhgpg eavstqpflc clcgmifpgr agyrlhrrqa
      901 hdsgvtegse eegeeegaag aisthspplq lseaellnql qrevealdga gyghicgccg
      961 qtyddlgsle rhhqsrnsgn atdevpslmh hpaesgdatv vvadgvfegt vtslpaeggd
     1021 tkpgegvgdt ladslcrqge essletqprp frcnqcgkty rhggslvnhr kihqtgefvc
     1081 pvcsrcypnl aayrnhlrnh prckgsepqv gpvpeaksns eaqtlaeegl eqaeverfqk
     1141 elkvepleeg arvkeeawee ttvkgeemep rletaekgcq teasserpfs cevcgrsykh
     1201 agslinhrqs hqtghfgcqa cskgfsnlms lknhrrihad prrfrcaecg kafrlrkqla
     1261 shqrvhlerg ggggshklsr edrpfrcgqc grtyrhagsl lnhrrshetg qyscptcpkt
     1321 ysnrmalrdh qrlhsesrrr raglsrrvav rcalcgrgfp grgslerhlr eheeetrggq
     1381 ggpdgteggq gnladnqgle drsggtesgp qledgatrpa eprqspirav gleatepasw
     1441 gmgeadgwqg dqgpenhdgd wvpghhvltk pedepgdnvp rspcplgntq pngpsltpvd
     1501 swdsgdcgpq pqpeshsfsc shcgkiscqs egplnhhsth ktdrhycllc skeflnpeap
     1561 kshsrnhiaa qtfscpdcgk afeshhelas hlqthtrgls qvspqvears pkvgaeeeev
     1621 efpgqgkaps elpvapgesv granggqgva savsgheerp frcaqcgrsy rhagsllnhq
     1681 kahttglypc slcpkllpnl lslknhgrth tdpkrhrcsi cgkafrtaar leghgrvhap
     1741 regpfscphc prhfrrrisf lqheqqhqee wtvassgtpk apaagrgdls lpppptptap
     1801 lldpspqwpa dlsfsl
//
LOCUS       XP_061009257            1816 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 646 [Dama dama].
ACCESSION   XP_061009257
VERSION     XP_061009257.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153274.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1816
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1816
                     /product="zinc finger protein 646"
                     /calculated_mol_wt=198747
     Region          10..31
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(15,17,19,21..22,25..26,29,54,56,60..61,64..65,68,81,
                     83,85,87..88,91..92,95)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          49..69
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(49,52,65,69)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          74..96
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          76..96
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <237..418
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          240..260
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(245,247,249,251..252,255..256,259,272,274,278..279,
                     282..283,286,300,302,304,306..307,310..311,314)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          267..287
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(267,270,283,287)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          295..315
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          375..395
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(380,382,384,386..387,390..391,394,407,409,413..414,
                     417..418,421,471,473,475,477..478,481..482,485)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          402..422
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(402,405,418,422)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          466..486
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          493..513
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          576..596
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(581,583,585,587..588,591..592,595,621,623,627..628,
                     631..632,635,648,650,652,654..655,658..659)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          616..636
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(616,619,632,636)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          643..660
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          820..840
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(825,827,829,831..832,835..836,839,852,854,858..859,
                     862..863,866,885,887,889,891..892,895..896)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          847..867
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(847,850,863,867)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          880..898
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1053..1073
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1053,1056,1069,1073)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          1080..1100
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1191..1211
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1218..1238
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1223,1225,1227,1229..1230,1233..1234,1237,1251,1253,
                     1257..1258,1261..1262,1265,1292,1294,1296,1298..1299,
                     1302..1303,1306)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          1246..1266
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1246,1249,1262,1266)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          1287..1307
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1314..1334
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1520..1540
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1525,1527,1529,1531..1532,1535..1536,1539,1552,1554,
                     1558..1559,1562..1563,1566,1580,1582,1584,1586..1587,
                     1590..1591,1594)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          1547..1567
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1547,1550,1563,1567)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          1575..1595
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1663..1683
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1668,1670,1672,1674..1675,1678..1679,1682,1695,1697,
                     1701..1702,1705..1706,1709,1723,1725,1727,1729..1730,
                     1733..1734,1737)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          1690..1710
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1690,1693,1706,1710)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          1718..1738
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1747..1767
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..1816
                     /gene="ZNF646"
                     /coded_by="XM_061153274.1:373..5823"
                     /db_xref="GeneID:133063647"
ORIGIN      
        1 medtptslsc sdcqrhfpsl pellrhrell hpsssqgsea dsiprpyrcq qcgrgyrhpg
       61 slvnhrrthe tglfpcttcg kdftnpmalk shmrthapeg rrrrrpprpk eatprlqget
      121 vstdswaqrl dpgegwenqk khieetsgce sgpdpraalg twedlptrqr egwenqpdpe
      181 egvegwgptt nsardtplpt passllsnle qylaesvvnf tggqeptqsa paeeerrykc
      241 sqcgktykha gsltnhrqsh tlgvypcaic fkefsnlmal knhsrlhaqy rpyqcphcpr
      301 afrlprelle hqqshegesq eqpweekgmp ttnghtdess qdqlpgtqml ngsgelstsg
      361 eledigleey rpfrcgdcgr tyrhagslin hrkshqtgvy pcsicskqlf naaalknhvr
      421 ahhrprqgag edgqpsvlpa plplaestrk eaeaptttld hrpykcnecg rayrhrgslv
      481 nhrhshrtge yqcslcprky pnlmalrnhv rvhckaarrs tgpgaegpps hlkvevppdp
      541 vgpettllcd qgpgckheeg apavppaadr tapqicsmcg mlfedsesle hhsrthgega
      601 qsrtearesp prvfacrdcg ksyrhsgsli nhrqthqtgd fscgacakhf htmaamknhl
      661 rrhsrrrsrr hrrragsagg ggeakppsdg nwapepvdsv glgcprdssr aspsgakgnm
      721 essggclqaa aerdncgler neacfqgdke srgaeegler meacfldnvd ipgteessgt
      781 rfcdglpgvk edqkpapgqp sspsrsassa gwpaevshtc sdcghsfpha tgllshrpch
      841 ppgiyqcslc pkefdslpal rshfqnhgpg eavstqpflc clcgmifpgr agyrlhrrqa
      901 hdsgvtegse eegeeegaag aisthspplq lseaellnql qrevealdga gyghicgccg
      961 qtyddlgsle rhhqsrnsgn atdevpslmh hpaesgdatv vvadgvfegt vtslpaeggd
     1021 tkpgegvgdt ladslcrqge essletqprp frcnqcgkty rhggslvnhr kihqtgefvc
     1081 pvcsrcypnl aayrnhlrnh prckgsepqv gpvpeaksns eaqtlaeegl eqaeverfqk
     1141 elkvepleeg arvkeeawee ttvkgeemep rletaekgcq teasserpfs cevcgrsykh
     1201 agslinhrqs hqtghfgcqa cskgfsnlms lknhrrihad prrfrcaecg kafrlrkqla
     1261 shqrvhlerg ggggshklsr edrpfrcgqc grtyrhagsl lnhrrshetg qyscptcpkt
     1321 ysnrmalrdh qrlhsesrrr raglsrrvav rcalcgrgfp grgslerhlr eheeetrggq
     1381 ggpdgteggq gnladnqgle drsggtesgp qledgatrpa eprqspirav gleatepasw
     1441 gmgeadgwqg dqgpenhdgd wvpghhvltk pedepgdnvp rspcplgntq pngpsltpvd
     1501 swdsgdcgpq pqpeshsfsc shcgkiscqs egplnhhsth ktdrhycllc skeflnpeap
     1561 kshsrnhiaa qtfscpdcgk afeshhelas hlqthtrgls qvspqvears pkvgaeeeev
     1621 efpgqgkaps elpvapgesv granggqgva savsgheerp frcaqcgrsy rhagsllnhq
     1681 kahttglypc slcpkllpnl lslknhgrth tdpkrhrcsi cgkafrtaar leghgrvhap
     1741 regpfscphc prhfrrrisf lqheqqhqee wtvassgtpk apaagrgdls lpppptptap
     1801 lldpspqwpa dlsfsl
//
LOCUS       XP_061009258            1816 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 646 [Dama dama].
ACCESSION   XP_061009258
VERSION     XP_061009258.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153275.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1816
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1816
                     /product="zinc finger protein 646"
                     /calculated_mol_wt=198747
     Region          10..31
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(15,17,19,21..22,25..26,29,54,56,60..61,64..65,68,81,
                     83,85,87..88,91..92,95)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          49..69
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(49,52,65,69)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          74..96
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          76..96
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <237..418
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          240..260
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(245,247,249,251..252,255..256,259,272,274,278..279,
                     282..283,286,300,302,304,306..307,310..311,314)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          267..287
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(267,270,283,287)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          295..315
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          375..395
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(380,382,384,386..387,390..391,394,407,409,413..414,
                     417..418,421,471,473,475,477..478,481..482,485)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          402..422
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(402,405,418,422)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          466..486
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          493..513
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          576..596
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(581,583,585,587..588,591..592,595,621,623,627..628,
                     631..632,635,648,650,652,654..655,658..659)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          616..636
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(616,619,632,636)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          643..660
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          820..840
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(825,827,829,831..832,835..836,839,852,854,858..859,
                     862..863,866,885,887,889,891..892,895..896)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          847..867
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(847,850,863,867)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          880..898
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1053..1073
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1053,1056,1069,1073)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          1080..1100
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1191..1211
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1218..1238
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1223,1225,1227,1229..1230,1233..1234,1237,1251,1253,
                     1257..1258,1261..1262,1265,1292,1294,1296,1298..1299,
                     1302..1303,1306)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          1246..1266
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1246,1249,1262,1266)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          1287..1307
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1314..1334
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1520..1540
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1525,1527,1529,1531..1532,1535..1536,1539,1552,1554,
                     1558..1559,1562..1563,1566,1580,1582,1584,1586..1587,
                     1590..1591,1594)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          1547..1567
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1547,1550,1563,1567)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          1575..1595
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1663..1683
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1668,1670,1672,1674..1675,1678..1679,1682,1695,1697,
                     1701..1702,1705..1706,1709,1723,1725,1727,1729..1730,
                     1733..1734,1737)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          1690..1710
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1690,1693,1706,1710)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          1718..1738
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1747..1767
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..1816
                     /gene="ZNF646"
                     /coded_by="XM_061153275.1:281..5731"
                     /db_xref="GeneID:133063647"
ORIGIN      
        1 medtptslsc sdcqrhfpsl pellrhrell hpsssqgsea dsiprpyrcq qcgrgyrhpg
       61 slvnhrrthe tglfpcttcg kdftnpmalk shmrthapeg rrrrrpprpk eatprlqget
      121 vstdswaqrl dpgegwenqk khieetsgce sgpdpraalg twedlptrqr egwenqpdpe
      181 egvegwgptt nsardtplpt passllsnle qylaesvvnf tggqeptqsa paeeerrykc
      241 sqcgktykha gsltnhrqsh tlgvypcaic fkefsnlmal knhsrlhaqy rpyqcphcpr
      301 afrlprelle hqqshegesq eqpweekgmp ttnghtdess qdqlpgtqml ngsgelstsg
      361 eledigleey rpfrcgdcgr tyrhagslin hrkshqtgvy pcsicskqlf naaalknhvr
      421 ahhrprqgag edgqpsvlpa plplaestrk eaeaptttld hrpykcnecg rayrhrgslv
      481 nhrhshrtge yqcslcprky pnlmalrnhv rvhckaarrs tgpgaegpps hlkvevppdp
      541 vgpettllcd qgpgckheeg apavppaadr tapqicsmcg mlfedsesle hhsrthgega
      601 qsrtearesp prvfacrdcg ksyrhsgsli nhrqthqtgd fscgacakhf htmaamknhl
      661 rrhsrrrsrr hrrragsagg ggeakppsdg nwapepvdsv glgcprdssr aspsgakgnm
      721 essggclqaa aerdncgler neacfqgdke srgaeegler meacfldnvd ipgteessgt
      781 rfcdglpgvk edqkpapgqp sspsrsassa gwpaevshtc sdcghsfpha tgllshrpch
      841 ppgiyqcslc pkefdslpal rshfqnhgpg eavstqpflc clcgmifpgr agyrlhrrqa
      901 hdsgvtegse eegeeegaag aisthspplq lseaellnql qrevealdga gyghicgccg
      961 qtyddlgsle rhhqsrnsgn atdevpslmh hpaesgdatv vvadgvfegt vtslpaeggd
     1021 tkpgegvgdt ladslcrqge essletqprp frcnqcgkty rhggslvnhr kihqtgefvc
     1081 pvcsrcypnl aayrnhlrnh prckgsepqv gpvpeaksns eaqtlaeegl eqaeverfqk
     1141 elkvepleeg arvkeeawee ttvkgeemep rletaekgcq teasserpfs cevcgrsykh
     1201 agslinhrqs hqtghfgcqa cskgfsnlms lknhrrihad prrfrcaecg kafrlrkqla
     1261 shqrvhlerg ggggshklsr edrpfrcgqc grtyrhagsl lnhrrshetg qyscptcpkt
     1321 ysnrmalrdh qrlhsesrrr raglsrrvav rcalcgrgfp grgslerhlr eheeetrggq
     1381 ggpdgteggq gnladnqgle drsggtesgp qledgatrpa eprqspirav gleatepasw
     1441 gmgeadgwqg dqgpenhdgd wvpghhvltk pedepgdnvp rspcplgntq pngpsltpvd
     1501 swdsgdcgpq pqpeshsfsc shcgkiscqs egplnhhsth ktdrhycllc skeflnpeap
     1561 kshsrnhiaa qtfscpdcgk afeshhelas hlqthtrgls qvspqvears pkvgaeeeev
     1621 efpgqgkaps elpvapgesv granggqgva savsgheerp frcaqcgrsy rhagsllnhq
     1681 kahttglypc slcpkllpnl lslknhgrth tdpkrhrcsi cgkafrtaar leghgrvhap
     1741 regpfscphc prhfrrrisf lqheqqhqee wtvassgtpk apaagrgdls lpppptptap
     1801 lldpspqwpa dlsfsl
//
LOCUS       XP_061009259            1816 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 646 [Dama dama].
ACCESSION   XP_061009259
VERSION     XP_061009259.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153276.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1816
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1816
                     /product="zinc finger protein 646"
                     /calculated_mol_wt=198747
     Region          10..31
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(15,17,19,21..22,25..26,29,54,56,60..61,64..65,68,81,
                     83,85,87..88,91..92,95)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          49..69
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(49,52,65,69)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          74..96
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          76..96
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <237..418
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          240..260
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(245,247,249,251..252,255..256,259,272,274,278..279,
                     282..283,286,300,302,304,306..307,310..311,314)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          267..287
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(267,270,283,287)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          295..315
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          375..395
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(380,382,384,386..387,390..391,394,407,409,413..414,
                     417..418,421,471,473,475,477..478,481..482,485)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          402..422
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(402,405,418,422)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          466..486
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          493..513
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          576..596
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(581,583,585,587..588,591..592,595,621,623,627..628,
                     631..632,635,648,650,652,654..655,658..659)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          616..636
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(616,619,632,636)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          643..660
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          820..840
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(825,827,829,831..832,835..836,839,852,854,858..859,
                     862..863,866,885,887,889,891..892,895..896)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          847..867
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(847,850,863,867)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          880..898
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1053..1073
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1053,1056,1069,1073)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          1080..1100
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1191..1211
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1218..1238
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1223,1225,1227,1229..1230,1233..1234,1237,1251,1253,
                     1257..1258,1261..1262,1265,1292,1294,1296,1298..1299,
                     1302..1303,1306)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          1246..1266
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1246,1249,1262,1266)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          1287..1307
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1314..1334
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1520..1540
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1525,1527,1529,1531..1532,1535..1536,1539,1552,1554,
                     1558..1559,1562..1563,1566,1580,1582,1584,1586..1587,
                     1590..1591,1594)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          1547..1567
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1547,1550,1563,1567)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          1575..1595
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1663..1683
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1668,1670,1672,1674..1675,1678..1679,1682,1695,1697,
                     1701..1702,1705..1706,1709,1723,1725,1727,1729..1730,
                     1733..1734,1737)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          1690..1710
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1690,1693,1706,1710)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          1718..1738
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1747..1767
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..1816
                     /gene="ZNF646"
                     /coded_by="XM_061153276.1:676..6126"
                     /db_xref="GeneID:133063647"
ORIGIN      
        1 medtptslsc sdcqrhfpsl pellrhrell hpsssqgsea dsiprpyrcq qcgrgyrhpg
       61 slvnhrrthe tglfpcttcg kdftnpmalk shmrthapeg rrrrrpprpk eatprlqget
      121 vstdswaqrl dpgegwenqk khieetsgce sgpdpraalg twedlptrqr egwenqpdpe
      181 egvegwgptt nsardtplpt passllsnle qylaesvvnf tggqeptqsa paeeerrykc
      241 sqcgktykha gsltnhrqsh tlgvypcaic fkefsnlmal knhsrlhaqy rpyqcphcpr
      301 afrlprelle hqqshegesq eqpweekgmp ttnghtdess qdqlpgtqml ngsgelstsg
      361 eledigleey rpfrcgdcgr tyrhagslin hrkshqtgvy pcsicskqlf naaalknhvr
      421 ahhrprqgag edgqpsvlpa plplaestrk eaeaptttld hrpykcnecg rayrhrgslv
      481 nhrhshrtge yqcslcprky pnlmalrnhv rvhckaarrs tgpgaegpps hlkvevppdp
      541 vgpettllcd qgpgckheeg apavppaadr tapqicsmcg mlfedsesle hhsrthgega
      601 qsrtearesp prvfacrdcg ksyrhsgsli nhrqthqtgd fscgacakhf htmaamknhl
      661 rrhsrrrsrr hrrragsagg ggeakppsdg nwapepvdsv glgcprdssr aspsgakgnm
      721 essggclqaa aerdncgler neacfqgdke srgaeegler meacfldnvd ipgteessgt
      781 rfcdglpgvk edqkpapgqp sspsrsassa gwpaevshtc sdcghsfpha tgllshrpch
      841 ppgiyqcslc pkefdslpal rshfqnhgpg eavstqpflc clcgmifpgr agyrlhrrqa
      901 hdsgvtegse eegeeegaag aisthspplq lseaellnql qrevealdga gyghicgccg
      961 qtyddlgsle rhhqsrnsgn atdevpslmh hpaesgdatv vvadgvfegt vtslpaeggd
     1021 tkpgegvgdt ladslcrqge essletqprp frcnqcgkty rhggslvnhr kihqtgefvc
     1081 pvcsrcypnl aayrnhlrnh prckgsepqv gpvpeaksns eaqtlaeegl eqaeverfqk
     1141 elkvepleeg arvkeeawee ttvkgeemep rletaekgcq teasserpfs cevcgrsykh
     1201 agslinhrqs hqtghfgcqa cskgfsnlms lknhrrihad prrfrcaecg kafrlrkqla
     1261 shqrvhlerg ggggshklsr edrpfrcgqc grtyrhagsl lnhrrshetg qyscptcpkt
     1321 ysnrmalrdh qrlhsesrrr raglsrrvav rcalcgrgfp grgslerhlr eheeetrggq
     1381 ggpdgteggq gnladnqgle drsggtesgp qledgatrpa eprqspirav gleatepasw
     1441 gmgeadgwqg dqgpenhdgd wvpghhvltk pedepgdnvp rspcplgntq pngpsltpvd
     1501 swdsgdcgpq pqpeshsfsc shcgkiscqs egplnhhsth ktdrhycllc skeflnpeap
     1561 kshsrnhiaa qtfscpdcgk afeshhelas hlqthtrgls qvspqvears pkvgaeeeev
     1621 efpgqgkaps elpvapgesv granggqgva savsgheerp frcaqcgrsy rhagsllnhq
     1681 kahttglypc slcpkllpnl lslknhgrth tdpkrhrcsi cgkafrtaar leghgrvhap
     1741 regpfscphc prhfrrrisf lqheqqhqee wtvassgtpk apaagrgdls lpppptptap
     1801 lldpspqwpa dlsfsl
//
LOCUS       XP_061009260            1816 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 646 [Dama dama].
ACCESSION   XP_061009260
VERSION     XP_061009260.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153277.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1816
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1816
                     /product="zinc finger protein 646"
                     /calculated_mol_wt=198747
     Region          10..31
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(15,17,19,21..22,25..26,29,54,56,60..61,64..65,68,81,
                     83,85,87..88,91..92,95)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          49..69
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(49,52,65,69)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          74..96
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          76..96
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <237..418
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          240..260
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(245,247,249,251..252,255..256,259,272,274,278..279,
                     282..283,286,300,302,304,306..307,310..311,314)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          267..287
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(267,270,283,287)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          295..315
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          375..395
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(380,382,384,386..387,390..391,394,407,409,413..414,
                     417..418,421,471,473,475,477..478,481..482,485)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          402..422
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(402,405,418,422)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          466..486
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          493..513
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          576..596
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(581,583,585,587..588,591..592,595,621,623,627..628,
                     631..632,635,648,650,652,654..655,658..659)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          616..636
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(616,619,632,636)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          643..660
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          820..840
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(825,827,829,831..832,835..836,839,852,854,858..859,
                     862..863,866,885,887,889,891..892,895..896)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          847..867
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(847,850,863,867)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          880..898
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1053..1073
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1053,1056,1069,1073)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          1080..1100
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1191..1211
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1218..1238
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1223,1225,1227,1229..1230,1233..1234,1237,1251,1253,
                     1257..1258,1261..1262,1265,1292,1294,1296,1298..1299,
                     1302..1303,1306)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          1246..1266
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1246,1249,1262,1266)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          1287..1307
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1314..1334
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1520..1540
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1525,1527,1529,1531..1532,1535..1536,1539,1552,1554,
                     1558..1559,1562..1563,1566,1580,1582,1584,1586..1587,
                     1590..1591,1594)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          1547..1567
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1547,1550,1563,1567)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          1575..1595
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1663..1683
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1668,1670,1672,1674..1675,1678..1679,1682,1695,1697,
                     1701..1702,1705..1706,1709,1723,1725,1727,1729..1730,
                     1733..1734,1737)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          1690..1710
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1690,1693,1706,1710)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          1718..1738
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1747..1767
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..1816
                     /gene="ZNF646"
                     /coded_by="XM_061153277.1:198..5648"
                     /db_xref="GeneID:133063647"
ORIGIN      
        1 medtptslsc sdcqrhfpsl pellrhrell hpsssqgsea dsiprpyrcq qcgrgyrhpg
       61 slvnhrrthe tglfpcttcg kdftnpmalk shmrthapeg rrrrrpprpk eatprlqget
      121 vstdswaqrl dpgegwenqk khieetsgce sgpdpraalg twedlptrqr egwenqpdpe
      181 egvegwgptt nsardtplpt passllsnle qylaesvvnf tggqeptqsa paeeerrykc
      241 sqcgktykha gsltnhrqsh tlgvypcaic fkefsnlmal knhsrlhaqy rpyqcphcpr
      301 afrlprelle hqqshegesq eqpweekgmp ttnghtdess qdqlpgtqml ngsgelstsg
      361 eledigleey rpfrcgdcgr tyrhagslin hrkshqtgvy pcsicskqlf naaalknhvr
      421 ahhrprqgag edgqpsvlpa plplaestrk eaeaptttld hrpykcnecg rayrhrgslv
      481 nhrhshrtge yqcslcprky pnlmalrnhv rvhckaarrs tgpgaegpps hlkvevppdp
      541 vgpettllcd qgpgckheeg apavppaadr tapqicsmcg mlfedsesle hhsrthgega
      601 qsrtearesp prvfacrdcg ksyrhsgsli nhrqthqtgd fscgacakhf htmaamknhl
      661 rrhsrrrsrr hrrragsagg ggeakppsdg nwapepvdsv glgcprdssr aspsgakgnm
      721 essggclqaa aerdncgler neacfqgdke srgaeegler meacfldnvd ipgteessgt
      781 rfcdglpgvk edqkpapgqp sspsrsassa gwpaevshtc sdcghsfpha tgllshrpch
      841 ppgiyqcslc pkefdslpal rshfqnhgpg eavstqpflc clcgmifpgr agyrlhrrqa
      901 hdsgvtegse eegeeegaag aisthspplq lseaellnql qrevealdga gyghicgccg
      961 qtyddlgsle rhhqsrnsgn atdevpslmh hpaesgdatv vvadgvfegt vtslpaeggd
     1021 tkpgegvgdt ladslcrqge essletqprp frcnqcgkty rhggslvnhr kihqtgefvc
     1081 pvcsrcypnl aayrnhlrnh prckgsepqv gpvpeaksns eaqtlaeegl eqaeverfqk
     1141 elkvepleeg arvkeeawee ttvkgeemep rletaekgcq teasserpfs cevcgrsykh
     1201 agslinhrqs hqtghfgcqa cskgfsnlms lknhrrihad prrfrcaecg kafrlrkqla
     1261 shqrvhlerg ggggshklsr edrpfrcgqc grtyrhagsl lnhrrshetg qyscptcpkt
     1321 ysnrmalrdh qrlhsesrrr raglsrrvav rcalcgrgfp grgslerhlr eheeetrggq
     1381 ggpdgteggq gnladnqgle drsggtesgp qledgatrpa eprqspirav gleatepasw
     1441 gmgeadgwqg dqgpenhdgd wvpghhvltk pedepgdnvp rspcplgntq pngpsltpvd
     1501 swdsgdcgpq pqpeshsfsc shcgkiscqs egplnhhsth ktdrhycllc skeflnpeap
     1561 kshsrnhiaa qtfscpdcgk afeshhelas hlqthtrgls qvspqvears pkvgaeeeev
     1621 efpgqgkaps elpvapgesv granggqgva savsgheerp frcaqcgrsy rhagsllnhq
     1681 kahttglypc slcpkllpnl lslknhgrth tdpkrhrcsi cgkafrtaar leghgrvhap
     1741 regpfscphc prhfrrrisf lqheqqhqee wtvassgtpk apaagrgdls lpppptptap
     1801 lldpspqwpa dlsfsl
//
LOCUS       XP_061009261            1816 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 646 [Dama dama].
ACCESSION   XP_061009261
VERSION     XP_061009261.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153278.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1816
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1816
                     /product="zinc finger protein 646"
                     /calculated_mol_wt=198747
     Region          10..31
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(15,17,19,21..22,25..26,29,54,56,60..61,64..65,68,81,
                     83,85,87..88,91..92,95)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          49..69
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(49,52,65,69)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          74..96
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          76..96
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <237..418
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          240..260
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(245,247,249,251..252,255..256,259,272,274,278..279,
                     282..283,286,300,302,304,306..307,310..311,314)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          267..287
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(267,270,283,287)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          295..315
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          375..395
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(380,382,384,386..387,390..391,394,407,409,413..414,
                     417..418,421,471,473,475,477..478,481..482,485)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          402..422
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(402,405,418,422)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          466..486
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          493..513
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          576..596
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(581,583,585,587..588,591..592,595,621,623,627..628,
                     631..632,635,648,650,652,654..655,658..659)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          616..636
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(616,619,632,636)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          643..660
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          820..840
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(825,827,829,831..832,835..836,839,852,854,858..859,
                     862..863,866,885,887,889,891..892,895..896)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          847..867
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(847,850,863,867)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          880..898
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1053..1073
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1053,1056,1069,1073)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          1080..1100
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1191..1211
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1218..1238
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1223,1225,1227,1229..1230,1233..1234,1237,1251,1253,
                     1257..1258,1261..1262,1265,1292,1294,1296,1298..1299,
                     1302..1303,1306)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          1246..1266
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1246,1249,1262,1266)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          1287..1307
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1314..1334
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1520..1540
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1525,1527,1529,1531..1532,1535..1536,1539,1552,1554,
                     1558..1559,1562..1563,1566,1580,1582,1584,1586..1587,
                     1590..1591,1594)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          1547..1567
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1547,1550,1563,1567)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          1575..1595
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1663..1683
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1668,1670,1672,1674..1675,1678..1679,1682,1695,1697,
                     1701..1702,1705..1706,1709,1723,1725,1727,1729..1730,
                     1733..1734,1737)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          1690..1710
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1690,1693,1706,1710)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          1718..1738
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1747..1767
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..1816
                     /gene="ZNF646"
                     /coded_by="XM_061153278.1:968..6418"
                     /db_xref="GeneID:133063647"
ORIGIN      
        1 medtptslsc sdcqrhfpsl pellrhrell hpsssqgsea dsiprpyrcq qcgrgyrhpg
       61 slvnhrrthe tglfpcttcg kdftnpmalk shmrthapeg rrrrrpprpk eatprlqget
      121 vstdswaqrl dpgegwenqk khieetsgce sgpdpraalg twedlptrqr egwenqpdpe
      181 egvegwgptt nsardtplpt passllsnle qylaesvvnf tggqeptqsa paeeerrykc
      241 sqcgktykha gsltnhrqsh tlgvypcaic fkefsnlmal knhsrlhaqy rpyqcphcpr
      301 afrlprelle hqqshegesq eqpweekgmp ttnghtdess qdqlpgtqml ngsgelstsg
      361 eledigleey rpfrcgdcgr tyrhagslin hrkshqtgvy pcsicskqlf naaalknhvr
      421 ahhrprqgag edgqpsvlpa plplaestrk eaeaptttld hrpykcnecg rayrhrgslv
      481 nhrhshrtge yqcslcprky pnlmalrnhv rvhckaarrs tgpgaegpps hlkvevppdp
      541 vgpettllcd qgpgckheeg apavppaadr tapqicsmcg mlfedsesle hhsrthgega
      601 qsrtearesp prvfacrdcg ksyrhsgsli nhrqthqtgd fscgacakhf htmaamknhl
      661 rrhsrrrsrr hrrragsagg ggeakppsdg nwapepvdsv glgcprdssr aspsgakgnm
      721 essggclqaa aerdncgler neacfqgdke srgaeegler meacfldnvd ipgteessgt
      781 rfcdglpgvk edqkpapgqp sspsrsassa gwpaevshtc sdcghsfpha tgllshrpch
      841 ppgiyqcslc pkefdslpal rshfqnhgpg eavstqpflc clcgmifpgr agyrlhrrqa
      901 hdsgvtegse eegeeegaag aisthspplq lseaellnql qrevealdga gyghicgccg
      961 qtyddlgsle rhhqsrnsgn atdevpslmh hpaesgdatv vvadgvfegt vtslpaeggd
     1021 tkpgegvgdt ladslcrqge essletqprp frcnqcgkty rhggslvnhr kihqtgefvc
     1081 pvcsrcypnl aayrnhlrnh prckgsepqv gpvpeaksns eaqtlaeegl eqaeverfqk
     1141 elkvepleeg arvkeeawee ttvkgeemep rletaekgcq teasserpfs cevcgrsykh
     1201 agslinhrqs hqtghfgcqa cskgfsnlms lknhrrihad prrfrcaecg kafrlrkqla
     1261 shqrvhlerg ggggshklsr edrpfrcgqc grtyrhagsl lnhrrshetg qyscptcpkt
     1321 ysnrmalrdh qrlhsesrrr raglsrrvav rcalcgrgfp grgslerhlr eheeetrggq
     1381 ggpdgteggq gnladnqgle drsggtesgp qledgatrpa eprqspirav gleatepasw
     1441 gmgeadgwqg dqgpenhdgd wvpghhvltk pedepgdnvp rspcplgntq pngpsltpvd
     1501 swdsgdcgpq pqpeshsfsc shcgkiscqs egplnhhsth ktdrhycllc skeflnpeap
     1561 kshsrnhiaa qtfscpdcgk afeshhelas hlqthtrgls qvspqvears pkvgaeeeev
     1621 efpgqgkaps elpvapgesv granggqgva savsgheerp frcaqcgrsy rhagsllnhq
     1681 kahttglypc slcpkllpnl lslknhgrth tdpkrhrcsi cgkafrtaar leghgrvhap
     1741 regpfscphc prhfrrrisf lqheqqhqee wtvassgtpk apaagrgdls lpppptptap
     1801 lldpspqwpa dlsfsl
//
LOCUS       XP_061009263             590 aa            linear   MAM 02-DEC-2023
DEFINITION  serine protease 53 [Dama dama].
ACCESSION   XP_061009263
VERSION     XP_061009263.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153280.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..590
                     /product="serine protease 53"
                     /calculated_mol_wt=63043
     Region          42..269
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            order(77,128,224)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(218,244,246)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     Region          312..521
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            order(341,382,476)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(471,495,497)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..590
                     /gene="PRSS53"
                     /coded_by="XM_061153280.1:1044..2816"
                     /db_xref="GeneID:133063648"
ORIGIN      
        1 mkqswglklf ilgavvhieg lqaaqracgq rgpgppepqe gdtvpgewpw qasvrrqgih
       61 vcsgslvads wvltaahcfe keamtelnaw svvlgslqhe glspgaeevg vtalqlpray
      121 nhysqgsdla llrlahpvah tplclprpah rfpfgtscwa tgwdqdtnda prtlrnlrlr
      181 lisrptcncl ynrlhqrsla sparpgmlcg gpqpgmqgpc qgdsggpvlc repdghwvqa
      241 giisfassca redtpvlltn maahsswlqa raqgaafltq npetpeisde dscvacgslr
      301 regpqagaps pwpwdarlkh qgklacggal vseevvltaa hcfigrqtpe ewtvglgvgp
      361 eesglkqvil hgaythpegg ydvallllaq pvtlgpslrp lclpysdhrl pdgergwvlg
      421 larqgadtss pqtvpvtllg pracsrlhga lgsnsilpgm vctsvvgepp gceglsgapl
      481 vhqvrgtwfl aglhsfgdac qgparpavfa alptyenwvs sldwqvyfae epepepeprs
      541 caantstwpw gllptpasad pfsaglgpsv pshlqlqwve pwteswgfky
//
LOCUS       XP_061009264             619 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 668 [Dama dama].
ACCESSION   XP_061009264
VERSION     XP_061009264.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153281.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..619
                     /product="zinc finger protein 668"
                     /calculated_mol_wt=67833
     Region          80..414
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          86..106
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          114..134
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(114,117,130,134)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          142..162
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          170..190
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(170,173,186,190)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          198..218
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          226..246
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(226,229,242,246)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Site            order(231,233,235,237..238,241..242,245,259,261,265..266,
                     269..270,273,287,289,291,293..294,297..298,301)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          248..598
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          254..274
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          282..302
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          310..330
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          338..358
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(338,341,354,358)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Site            order(343,345,347,349..350,353..354,357,371,373,377..378,
                     381..382,385,399,401,403,405..406,409..410,413)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          366..386
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          394..414
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          518..538
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(518,521,534,538)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Site            order(523,525,527,529..530,533..534,537,551,553,557..558,
                     561..562,565,579,581,583,585..586,589..590,593)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          546..566
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          574..594
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..619
                     /gene="ZNF668"
                     /coded_by="XM_061153281.1:128..1987"
                     /db_xref="GeneID:133063649"
ORIGIN      
        1 mevespedrs papgykrsgr rykclsctkt fpnapraarh aathgpadct eemaeaklkp
       61 etdpkaedas gdkvsgaaak prpyacplcp kayktapelr shgrshtgek pfpcpecgrr
      121 fmqpvclrvh lashagelpf rcahcpkayg alsklkihqr ghtgerpytc adcgksfadp
      181 svfrkhrrth aglrpyscer cgkayaelkd lrnhershtg erpflcsecg ksfsrssslt
      241 chqrihaaqk pyrcpacgkg ftqlssyqsh erthsgekpf lcprcgrmfs dpssfrrhqr
      301 ahegvkpyrc ekcgkdfrqp adlamhrrvh tgdrpfkclq cdktfvaswd lkrhalvhsg
      361 qrpfrceecg rafaeraslt khsrvhsger pfhcnacgks fvvssslrkh erthrsseat
      421 gapppqelvv glalpvsmag egsaapasga algdppagll glppesggvm atqwqvvgmt
      481 vehvecqdag vgeapgplga agevggeevd ekppqfvcre cketfstltl lrrhershpe
      541 lrpfpctqcg ksfsdraglr khsrthssvr pytcphcpka flsasdlrkh erthpvpiga
      601 ptpleplval lgmpeegpa
//
LOCUS       XP_061009265             163 aa            linear   MAM 02-DEC-2023
DEFINITION  vitamin K epoxide reductase complex subunit 1 isoform X1 [Dama
            dama].
ACCESSION   XP_061009265
VERSION     XP_061009265.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153282.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..163
                     /product="vitamin K epoxide reductase complex subunit 1
                     isoform X1"
                     /calculated_mol_wt=17970
     Region          10..149
                     /region_name="VKOR_euk"
                     /note="Vitamin K epoxide reductase family in eukaryotes,
                     excluding plants; cd12917"
                     /db_xref="CDD:240600"
     Site            order(43,51,57,132,135)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:240600"
     Site            132..135
                     /site_type="active"
                     /note="redox center [active]"
                     /db_xref="CDD:240600"
     CDS             1..163
                     /gene="VKORC1"
                     /coded_by="XM_061153282.1:52..543"
                     /db_xref="GeneID:133063650"
ORIGIN      
        1 mgttwrspgw vrlalclagl vlslyalhvk aarardrdyr alcdvgtais csrvfssrwg
       61 rgfglvehvl gkdsvlnqsn sifgcifytl qlllgclqsr wasvllklss lvslagsvyl
      121 awilffvlyd fcivcittya invglmvlsf revqgpqskv keh
//
LOCUS       XP_061009266             134 aa            linear   MAM 02-DEC-2023
DEFINITION  vitamin K epoxide reductase complex subunit 1 isoform X2 [Dama
            dama].
ACCESSION   XP_061009266
VERSION     XP_061009266.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153283.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..134
                     /product="vitamin K epoxide reductase complex subunit 1
                     isoform X2"
                     /calculated_mol_wt=14390
     Region          10..>58
                     /region_name="VKOR"
                     /note="Vitamin K epoxide reductase (VKOR) family; cl01729"
                     /db_xref="CDD:445522"
     CDS             1..134
                     /gene="VKORC1"
                     /coded_by="XM_061153283.1:57..461"
                     /db_xref="GeneID:133063650"
ORIGIN      
        1 mgttwrspgw vrlalclagl vlslyalhvk aarardrdyr alcdvgtais csrvfssrlp
       61 aeplgicste veflgvsswf cvpgldpvlr avrflhrlhh ylchqcgpdg aqfpggpgtp
      121 eqgqgalsph pkpe
//
LOCUS       XP_061009267             458 aa            linear   MAM 02-DEC-2023
DEFINITION  histone acetyltransferase KAT8 [Dama dama].
ACCESSION   XP_061009267
VERSION     XP_061009267.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153284.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..458
                     /product="histone acetyltransferase KAT8"
                     /calculated_mol_wt=52328
     Region          21..449
                     /region_name="PLN00104"
                     /note="MYST -like histone acetyltransferase; Provisional"
                     /db_xref="CDD:215056"
     CDS             1..458
                     /gene="KAT8"
                     /coded_by="XM_061153284.1:871..2247"
                     /db_xref="GeneID:133063651"
ORIGIN      
        1 maaqgaaaav aaatsgvage gepgpgenaa vegtapspgr ispptparge pevtveiget
       61 ylcrrpdstw hsaeviqsrv ndqegreefy vhyvgfnrrl dewvdknrla ltktvkdavq
      121 knsekylsel aeqperkitr nqkrkhdein hvqktyaemd pttaalekeh eaitkvkyvd
      181 kihignyeid awyfspfped ygkqpklwlc eyclkymkye ksyrfhlgqc qwrqppgkei
      241 yrksnisvye vdgkdhkiyc qnlcllaklf ldhktlyfdv epfvfyilte vdrqgahivg
      301 yfskekespd gnnvaciltl ppyqrrgygk fliafsyels klestvgspe kplsdlgkls
      361 yrsywswvll eilrdfrgtl sikdlsqmts itqndiistl qslnmvkywk gqhvicvtpk
      421 lveehlksaq ykkppitvds vclkwappkh kqvklskk
//
LOCUS       XP_061009268             412 aa            linear   MAM 02-DEC-2023
DEFINITION  3-methyl-2-oxobutanoate dehydrogenase [lipoamide] kinase,
            mitochondrial [Dama dama].
ACCESSION   XP_061009268
VERSION     XP_061009268.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153285.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..412
                     /product="3-methyl-2-oxobutanoate dehydrogenase
                     [lipoamide] kinase, mitochondrial"
                     /calculated_mol_wt=46320
     Region          69..222
                     /region_name="BCDHK_Adom3"
                     /note="Mitochondrial branched-chain alpha-ketoacid
                     dehydrogenase kinase; pfam10436"
                     /db_xref="CDD:463093"
     Region          226..401
                     /region_name="HATPase_PDK-like"
                     /note="Histidine kinase-like ATPase domain of pyruvate
                     dehydrogenase kinase, branched-chain alpha-ketoacid
                     dehydrogenase kinase and related domains; cd16929"
                     /db_xref="CDD:340406"
     Site            order(255,301,303,305..308,310..312,316,321..323,386,
                     388..392,395,399)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:340406"
     Site            order(275,279..280,282..283,313,315,317,319..320,328,
                     364..371,387,389,393..394,396)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340406"
     Site            order(329,370)
                     /site_type="other"
                     /note="ATP-lid"
                     /db_xref="CDD:340406"
     CDS             1..412
                     /gene="BCKDK"
                     /coded_by="XM_061153285.1:440..1678"
                     /db_xref="GeneID:133063652"
ORIGIN      
        1 milasvlgsg prggsplrpl lgptlslrar stsatdthhv emarersktv tsfynqsaid
       61 vaaekpsvrl tptmmlysgr sqdgshllks arylqqelpv riahrikgfr slpfiigcnp
      121 tilhvhelyi rafqkltdfp pikdqadear ycqlvrqlld dhkdvvtlla eglresrkhi
      181 edeklvryfl dktltsrlgi rmlathhlal hedkpdfvgi ictrlspkki iekwvdfarr
      241 lcehkygnap rvringhvaa rfpfipmpld yilpellkna mratmeshld tpynvpdvvi
      301 tianndidlv irisdrgggi ahkdldrvmd yhfttaeast qdprisplfg hldmhsggqs
      361 gpmhgfgfgl ptsrayaeyl ggslrlqslq gigtdvylrl rhidgreesf ri
//
LOCUS       XP_061009269             412 aa            linear   MAM 02-DEC-2023
DEFINITION  3-methyl-2-oxobutanoate dehydrogenase [lipoamide] kinase,
            mitochondrial [Dama dama].
ACCESSION   XP_061009269
VERSION     XP_061009269.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153286.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..412
                     /product="3-methyl-2-oxobutanoate dehydrogenase
                     [lipoamide] kinase, mitochondrial"
                     /calculated_mol_wt=46320
     Region          69..222
                     /region_name="BCDHK_Adom3"
                     /note="Mitochondrial branched-chain alpha-ketoacid
                     dehydrogenase kinase; pfam10436"
                     /db_xref="CDD:463093"
     Region          226..401
                     /region_name="HATPase_PDK-like"
                     /note="Histidine kinase-like ATPase domain of pyruvate
                     dehydrogenase kinase, branched-chain alpha-ketoacid
                     dehydrogenase kinase and related domains; cd16929"
                     /db_xref="CDD:340406"
     Site            order(255,301,303,305..308,310..312,316,321..323,386,
                     388..392,395,399)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:340406"
     Site            order(275,279..280,282..283,313,315,317,319..320,328,
                     364..371,387,389,393..394,396)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340406"
     Site            order(329,370)
                     /site_type="other"
                     /note="ATP-lid"
                     /db_xref="CDD:340406"
     CDS             1..412
                     /gene="BCKDK"
                     /coded_by="XM_061153286.1:278..1516"
                     /db_xref="GeneID:133063652"
ORIGIN      
        1 milasvlgsg prggsplrpl lgptlslrar stsatdthhv emarersktv tsfynqsaid
       61 vaaekpsvrl tptmmlysgr sqdgshllks arylqqelpv riahrikgfr slpfiigcnp
      121 tilhvhelyi rafqkltdfp pikdqadear ycqlvrqlld dhkdvvtlla eglresrkhi
      181 edeklvryfl dktltsrlgi rmlathhlal hedkpdfvgi ictrlspkki iekwvdfarr
      241 lcehkygnap rvringhvaa rfpfipmpld yilpellkna mratmeshld tpynvpdvvi
      301 tianndidlv irisdrgggi ahkdldrvmd yhfttaeast qdprisplfg hldmhsggqs
      361 gpmhgfgfgl ptsrayaeyl ggslrlqslq gigtdvylrl rhidgreesf ri
//
LOCUS       XP_061009271             333 aa            linear   MAM 02-DEC-2023
DEFINITION  prostasin [Dama dama].
ACCESSION   XP_061009271
VERSION     XP_061009271.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153288.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..333
                     /product="prostasin"
                     /calculated_mol_wt=35592
     Region          36..273
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            36
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(76,125,229)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(223,248,250)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..333
                     /gene="PRSS8"
                     /coded_by="XM_061153288.1:252..1253"
                     /db_xref="GeneID:133063653"
ORIGIN      
        1 magravvtvl llglfqngig avgaeascgm vpqaritggt daargqwpwq vsinhhgthv
       61 cggslvseqw vlsaahcfpr dnkieeyevk lgahqldyys tdtqvrrvaq vishetyshe
      121 gsmgdiallq lsspvtfsry irpiclpaan tsfpnglqci vtgwghvaps vslpnprplq
      181 qlevplisre tcnclynina kpgephlinq dmlcagyvng skdacqgdsg gplscpvagr
      241 wylagivswg dacgapnrpg vytltsvyas wihykvanlq sqvvpqmkes qpdghlcshy
      301 tgfssapaqg lvgpilllpl gltlsllrpl red
//
LOCUS       XP_061009272             514 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA-binding protein FUS isoform X1 [Dama dama].
ACCESSION   XP_061009272
VERSION     XP_061009272.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153289.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..514
                     /product="RNA-binding protein FUS isoform X1"
                     /calculated_mol_wt=52152
     Region          271..356
                     /region_name="RRM_FUS_TAF15"
                     /note="RNA recognition motif (RRM) found in vertebrate
                     fused in Ewing's sarcoma protein (FUS), TATA-binding
                     protein-associated factor 15 (TAF15) and similar proteins;
                     cd12535"
                     /db_xref="CDD:409951"
     Region          410..437
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     CDS             1..514
                     /gene="FUS"
                     /coded_by="XM_061153289.1:49..1593"
                     /db_xref="GeneID:133063654"
ORIGIN      
        1 masndytqqa tqsygaypsq pgqgysqqss qpygqqsygg ygqstdtsgy gqssygssyg
       61 qtqntgystq sapqgygsag gygssqssqs sygqqssypg ygqqpapsst sgsyggssqs
      121 sgygqpqsgg ygqqsgyggq qqsygqqpsy nppqgygqqn qynsgsgggg ggggggygqd
      181 qssmssgggg ggygnqdqsg gygggqqdrg grgrgggggy nrssggyepr grgggrggrg
      241 gmggsdrggf nkfggprdqg srhdseqdns dnntifvqgl genvtiesva dyfkqigiik
      301 tnkktgqpmi nlytdretgk lkgeatvsfd dppsakaaid wfdgkefsgn pikvsfatrr
      361 adfnrgggng rggrgrggpm grggyggggs ggggrggfps gggggggqqr agdwkcpnpt
      421 cenmnfswrn ecnqckapkp dgpgggpggs hmggnygddr rggrggydrg gyrgrggdrg
      481 gfrggrgggd rggfgpgkmd srgehrqdrr erpy
//
LOCUS       XP_061009273             513 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA-binding protein FUS isoform X2 [Dama dama].
ACCESSION   XP_061009273
VERSION     XP_061009273.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153290.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..513
                     /product="RNA-binding protein FUS isoform X2"
                     /calculated_mol_wt=52081
     Region          270..355
                     /region_name="RRM_FUS_TAF15"
                     /note="RNA recognition motif (RRM) found in vertebrate
                     fused in Ewing's sarcoma protein (FUS), TATA-binding
                     protein-associated factor 15 (TAF15) and similar proteins;
                     cd12535"
                     /db_xref="CDD:409951"
     Region          409..436
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     CDS             1..513
                     /gene="FUS"
                     /coded_by="XM_061153290.1:50..1591"
                     /db_xref="GeneID:133063654"
ORIGIN      
        1 masndytqqa tqsygaypsq pgqgysqqss qpygqqsygg ygqstdtsgy gqssygssyg
       61 qtqnsystqs apqgygsagg ygssqssqss ygqqssypgy gqqpapssts gsyggssqss
      121 gygqpqsggy gqqsgyggqq qsygqqpsyn ppqgygqqnq ynsgsggggg gggggygqdq
      181 ssmssggggg gygnqdqsgg ygggqqdrgg rgrgggggyn rssggyeprg rgggrggrgg
      241 mggsdrggfn kfggprdqgs rhdseqdnsd nntifvqglg envtiesvad yfkqigiikt
      301 nkktgqpmin lytdretgkl kgeatvsfdd ppsakaaidw fdgkefsgnp ikvsfatrra
      361 dfnrgggngr ggrgrggpmg rggyggggsg gggrggfpsg ggggggqqra gdwkcpnptc
      421 enmnfswrne cnqckapkpd gpgggpggsh mggnygddrr ggrggydrgg yrgrggdrgg
      481 frggrgggdr ggfgpgkmds rgehrqdrre rpy
//
LOCUS       XP_061009274             507 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA-binding protein FUS isoform X3 [Dama dama].
ACCESSION   XP_061009274
VERSION     XP_061009274.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153291.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..507
                     /product="RNA-binding protein FUS isoform X3"
                     /calculated_mol_wt=51752
     Region          264..349
                     /region_name="RRM_FUS_TAF15"
                     /note="RNA recognition motif (RRM) found in vertebrate
                     fused in Ewing's sarcoma protein (FUS), TATA-binding
                     protein-associated factor 15 (TAF15) and similar proteins;
                     cd12535"
                     /db_xref="CDD:409951"
     Region          403..430
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     CDS             1..507
                     /gene="FUS"
                     /coded_by="XM_061153291.1:49..1572"
                     /db_xref="GeneID:133063654"
ORIGIN      
        1 masndytqqa tqsygaypsq pgqgysqqss qpygqqsygg ygqstdtsgy gqssygssyg
       61 qtqntgystq sapqgygsag gygssqssqs sygqqssypg ygqqpapsst sgsyggssqs
      121 sgygqpqsgg ygqqsgyggq qqsygqqpsy nppqgygqqn qynsgsgggy gqdqssmssg
      181 gggggygnqd qsggygggqq drggrgrggg ggynrssggy eprgrgggrg grggmggsdr
      241 ggfnkfggpr dqgsrhdseq dnsdnntifv qglgenvtie svadyfkqig iiktnkktgq
      301 pminlytdre tgklkgeatv sfddppsaka aidwfdgkef sgnpikvsfa trradfnrgg
      361 gngrggrgrg gpmgrggygg ggsggggrgg fpsggggggg qqragdwkcp nptcenmnfs
      421 wrnecnqcka pkpdgpgggp ggshmggnyg ddrrggrggy drggyrgrgg drggfrggrg
      481 ggdrggfgpg kmdsrgehrq drrerpy
//
LOCUS       XP_061009275             504 aa            linear   MAM 02-DEC-2023
DEFINITION  tripartite motif-containing protein 72 isoform X1 [Dama dama].
ACCESSION   XP_061009275
VERSION     XP_061009275.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153292.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..504
                     /product="tripartite motif-containing protein 72 isoform
                     X1"
                     /calculated_mol_wt=55113
     Region          25..85
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(31,34,46,48,51,54,70,73)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438274"
     Region          101..142
                     /region_name="Bbox2_TRIM72_C-IV"
                     /note="B-box-type 2 zinc finger found in tripartite
                     motif-containing protein 72 (TRIM72) and similar proteins;
                     cd19797"
                     /db_xref="CDD:380855"
     Region          <138..236
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          295..487
                     /region_name="SPRY"
                     /note="SPRY domain; cl02614"
                     /db_xref="CDD:470632"
     CDS             1..504
                     /gene="TRIM72"
                     /coded_by="XM_061153292.1:69..1583"
                     /db_xref="GeneID:133063655"
ORIGIN      
        1 mvspslsevs arkprpamsa apgllhqels cplclqlfda pvtaecghsf craclsrvag
       61 epaadgtvlc pscqaptrpq alstnlqlar lveglaqvpq ghceehldpl siyceqdral
      121 vcgvcaslgs hrghrllpaa eaharlktql pqqkmqlqea cmrkeksval lehqllevee
      181 tvrqfrgavg eqlgkmrlfl aalegsldre aervrgeagv alrrelgsln syleqlrqme
      241 kvleevadkp qteflmkycl vtsrlqkila esppparldi qlpiisddfk fqvwrkmfra
      301 lmpalqeltf dpstahpslv lsnsgrrvec seqkappage dprqfdkava vvthqllseg
      361 ehywevevgd kprwalgvig aqagrrgrlh avpsqglwll glrdgkilea hveakepral
      421 rtperrptri giylsfgdgv lsfydasdpd alellfafhe rlpgpvypff dvcwhdkgkn
      481 aqplllvgpd vggggggsgg gsea
//
LOCUS       XP_061009276             487 aa            linear   MAM 02-DEC-2023
DEFINITION  tripartite motif-containing protein 72 isoform X2 [Dama dama].
ACCESSION   XP_061009276
VERSION     XP_061009276.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153293.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..487
                     /product="tripartite motif-containing protein 72 isoform
                     X2"
                     /calculated_mol_wt=53319
     Region          8..68
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(14,17,29,31,34,37,53,56)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438274"
     Region          84..125
                     /region_name="Bbox2_TRIM72_C-IV"
                     /note="B-box-type 2 zinc finger found in tripartite
                     motif-containing protein 72 (TRIM72) and similar proteins;
                     cd19797"
                     /db_xref="CDD:380855"
     Region          <121..219
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          278..470
                     /region_name="SPRY_PRY_TRIM72"
                     /note="PRY/SPRY domain in tripartite motif-binding protein
                     72 (TRIM72); cd13742"
                     /db_xref="CDD:293976"
     CDS             1..487
                     /gene="TRIM72"
                     /coded_by="XM_061153293.1:406..1869"
                     /db_xref="GeneID:133063655"
ORIGIN      
        1 msaapgllhq elscplclql fdapvtaecg hsfcraclsr vagepaadgt vlcpscqapt
       61 rpqalstnlq larlveglaq vpqghceehl dplsiyceqd ralvcgvcas lgshrghrll
      121 paaeaharlk tqlpqqkmql qeacmrkeks vallehqlle veetvrqfrg avgeqlgkmr
      181 lflaalegsl dreaervrge agvalrrelg slnsyleqlr qmekvleeva dkpqteflmk
      241 yclvtsrlqk ilaespppar ldiqlpiisd dfkfqvwrkm fralmpalqe ltfdpstahp
      301 slvlsnsgrr vecseqkapp agedprqfdk avavvthqll segehyweve vgdkprwalg
      361 vigaqagrrg rlhavpsqgl wllglrdgki leahveakep ralrtperrp trigiylsfg
      421 dgvlsfydas dpdalellfa fherlpgpvy pffdvcwhdk gknaqplllv gpdvgggggg
      481 sgggsea
//
LOCUS       XP_061009277             487 aa            linear   MAM 02-DEC-2023
DEFINITION  tripartite motif-containing protein 72 isoform X2 [Dama dama].
ACCESSION   XP_061009277
VERSION     XP_061009277.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153294.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..487
                     /product="tripartite motif-containing protein 72 isoform
                     X2"
                     /calculated_mol_wt=53319
     Region          8..68
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(14,17,29,31,34,37,53,56)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438274"
     Region          84..125
                     /region_name="Bbox2_TRIM72_C-IV"
                     /note="B-box-type 2 zinc finger found in tripartite
                     motif-containing protein 72 (TRIM72) and similar proteins;
                     cd19797"
                     /db_xref="CDD:380855"
     Region          <121..219
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          278..470
                     /region_name="SPRY_PRY_TRIM72"
                     /note="PRY/SPRY domain in tripartite motif-binding protein
                     72 (TRIM72); cd13742"
                     /db_xref="CDD:293976"
     CDS             1..487
                     /gene="TRIM72"
                     /coded_by="XM_061153294.1:446..1909"
                     /db_xref="GeneID:133063655"
ORIGIN      
        1 msaapgllhq elscplclql fdapvtaecg hsfcraclsr vagepaadgt vlcpscqapt
       61 rpqalstnlq larlveglaq vpqghceehl dplsiyceqd ralvcgvcas lgshrghrll
      121 paaeaharlk tqlpqqkmql qeacmrkeks vallehqlle veetvrqfrg avgeqlgkmr
      181 lflaalegsl dreaervrge agvalrrelg slnsyleqlr qmekvleeva dkpqteflmk
      241 yclvtsrlqk ilaespppar ldiqlpiisd dfkfqvwrkm fralmpalqe ltfdpstahp
      301 slvlsnsgrr vecseqkapp agedprqfdk avavvthqll segehyweve vgdkprwalg
      361 vigaqagrrg rlhavpsqgl wllglrdgki leahveakep ralrtperrp trigiylsfg
      421 dgvlsfydas dpdalellfa fherlpgpvy pffdvcwhdk gknaqplllv gpdvgggggg
      481 sgggsea
//
LOCUS       XP_061009278             487 aa            linear   MAM 02-DEC-2023
DEFINITION  tripartite motif-containing protein 72 isoform X2 [Dama dama].
ACCESSION   XP_061009278
VERSION     XP_061009278.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153295.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..487
                     /product="tripartite motif-containing protein 72 isoform
                     X2"
                     /calculated_mol_wt=53319
     Region          8..68
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(14,17,29,31,34,37,53,56)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438274"
     Region          84..125
                     /region_name="Bbox2_TRIM72_C-IV"
                     /note="B-box-type 2 zinc finger found in tripartite
                     motif-containing protein 72 (TRIM72) and similar proteins;
                     cd19797"
                     /db_xref="CDD:380855"
     Region          <121..219
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          278..470
                     /region_name="SPRY_PRY_TRIM72"
                     /note="PRY/SPRY domain in tripartite motif-binding protein
                     72 (TRIM72); cd13742"
                     /db_xref="CDD:293976"
     CDS             1..487
                     /gene="TRIM72"
                     /coded_by="XM_061153295.1:352..1815"
                     /db_xref="GeneID:133063655"
ORIGIN      
        1 msaapgllhq elscplclql fdapvtaecg hsfcraclsr vagepaadgt vlcpscqapt
       61 rpqalstnlq larlveglaq vpqghceehl dplsiyceqd ralvcgvcas lgshrghrll
      121 paaeaharlk tqlpqqkmql qeacmrkeks vallehqlle veetvrqfrg avgeqlgkmr
      181 lflaalegsl dreaervrge agvalrrelg slnsyleqlr qmekvleeva dkpqteflmk
      241 yclvtsrlqk ilaespppar ldiqlpiisd dfkfqvwrkm fralmpalqe ltfdpstahp
      301 slvlsnsgrr vecseqkapp agedprqfdk avavvthqll segehyweve vgdkprwalg
      361 vigaqagrrg rlhavpsqgl wllglrdgki leahveakep ralrtperrp trigiylsfg
      421 dgvlsfydas dpdalellfa fherlpgpvy pffdvcwhdk gknaqplllv gpdvgggggg
      481 sgggsea
//
LOCUS       XP_061009280             195 aa            linear   MAM 02-DEC-2023
DEFINITION  apoptosis-associated speck-like protein containing a CARD [Dama
            dama].
ACCESSION   XP_061009280
VERSION     XP_061009280.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153297.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..195
                     /product="apoptosis-associated speck-like protein
                     containing a CARD"
                     /calculated_mol_wt=21672
     Region          5..87
                     /region_name="Pyrin_ASC-like"
                     /note="Pyrin Death Domain found in ASC; cd08321"
                     /db_xref="CDD:260033"
     Region          113..193
                     /region_name="CARD_ASC_NALP1"
                     /note="Caspase activation and recruitment domain found in
                     Human ASC, NALP1, and similar proteins; cd08330"
                     /db_xref="CDD:260039"
     CDS             1..195
                     /gene="LOC133063656"
                     /coded_by="XM_061153297.1:75..662"
                     /db_xref="GeneID:133063656"
ORIGIN      
        1 mgctrdaild alenltadef kkfkmkllsv plregfgrip rgtllpldav dltdklvsyy
       61 leaygaelta lvlrdmgmqe vaeqlqeams kgprnvpaev raplqktakp glhfvdqhra
      121 aliarvtvvd gvldalygki ltedqyqavr aertssdkmr klfsfapawn lackdlllqa
      181 lrdnhpylvd dleqs
//
LOCUS       XP_061009281            1190 aa            linear   MAM 02-DEC-2023
DEFINITION  integrin alpha-M isoform X1 [Dama dama].
ACCESSION   XP_061009281
VERSION     XP_061009281.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153298.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1190
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1190
                     /product="integrin alpha-M isoform X1"
                     /calculated_mol_wt=131857
     Region          149..324
                     /region_name="vWA_integrins_alpha_subunit"
                     /note="Integrins are a class of adhesion receptors that
                     link the extracellular matrix to the cytoskeleton and
                     cooperate with growth factor receptors to promote celll
                     survival, cell cycle progression and cell migration.
                     Integrins consist of an alpha and a beta...; cd01469"
                     /db_xref="CDD:238746"
     Site            order(149,151,172,252,254,283,313)
                     /site_type="active"
                     /note="integrin inhibitor binding pocket [active]"
                     /db_xref="CDD:238746"
     Site            order(156,158,160,225,258)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238746"
     Site            order(158..160,162,225)
                     /site_type="active"
                     /note="integrin-collagen binding site [active]"
                     /db_xref="CDD:238746"
     Region          453..509
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          516..571
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          581..>605
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          615..>925
                     /region_name="Integrin_alpha2"
                     /note="Integrin alpha; pfam08441"
                     /db_xref="CDD:462478"
     Region          1167..1181
                     /region_name="Integrin_alpha"
                     /note="Integrin alpha cytoplasmic region; pfam00357"
                     /db_xref="CDD:459778"
     CDS             1..1190
                     /gene="ITGAM"
                     /coded_by="XM_061153298.1:112..3684"
                     /db_xref="GeneID:133063657"
ORIGIN      
        1 mnhrilllta lalchgfnld tekavifqnn argfgqsvvq iqgsrlvvga pqevkaanqt
       61 gglyqcdysl grceaislrv ppeavnmslg lslafaanpf rllacgptvh qickenayan
      121 glcflfgsnl rqqprtipea lrgcpqedsd iaflidgsgs ifpedfdrmk kfvstvmsqf
      181 qksktlfslm qysndfrthf tfndfkrnsd pkllvepirq lqgwthtatg irkvvrelfh
      241 ssrgardhal kimivitdge kyldpleyrd vipeadrkgi iryvigvgda frgentqkel
      301 htiaskpsad hvfrvnnfea lktiqnqlqe kifaiegtqt gstssfeyem sqegfsaaft
      361 sdgpllgavg sfdwaggafl htskdkitfi nttrvdsdmn daylgyaaev tlrnrvqslf
      421 lgapryqhvg lvvifrqnag vweknaeikg sqigsyfgas lhsvdvnrdg ssdliligap
      481 hfyeqmrggq vsvcpfprgr akwqcdavlr gepghpwsrf gaaltalgdv ngdrladvai
      541 gapgeqenqg avylfhgtse lginpshsqr itgsqispkl qyfgqslsgg qdltmdglvd
      601 lavgaqghvl llrsqpvlkv eatmeftpke vkrnvyecrd lvikdriagq vkvclqvrks
      661 twdrlgegdt qstityelal dpgrphsqav fdetknntrr hvetlrlrqk cetltirlld
      721 cvedsvtpia lrlnfslvge parnygglrp vlavdalrlf taslpfeknc gndtvcqddl
      781 sitfsfldld tlvvggprdl nvtltvrnqg edsyrtqvtf fypsglsyrr vsagqnqrsh
      841 rswrlacesd vstegsetlk sttcsinhpi fpdnseitfn vtfdvnpdty fgnklllkan
      901 vtsennmpgn nktqfqlelp vkyavymvvt sleastkyln ftasektrhv mehqyqyscl
      961 enphgqrsla gyspwgckes dtnevtehtc vythfnnlgr kklpisvvfw ipiqlnkvav
     1021 wsqpqvtfsq nvsggcnite vaprhsdfla elkkspvlnc svavcqriqc aipsfgvqee
     1081 fkvtlksnls fdwyiqtshn hlqvvskaei lfdeseftll pgqdgfvmaq tetkvesyev
     1141 hnpvpliags svgglvllal isaglyklgf fkrqykdmmt eagpdaaapq
//
LOCUS       XP_061009282            1152 aa            linear   MAM 02-DEC-2023
DEFINITION  integrin alpha-M isoform X2 [Dama dama].
ACCESSION   XP_061009282
VERSION     XP_061009282.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153299.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1152
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1152
                     /product="integrin alpha-M isoform X2"
                     /calculated_mol_wt=127574
     Region          149..324
                     /region_name="vWA_integrins_alpha_subunit"
                     /note="Integrins are a class of adhesion receptors that
                     link the extracellular matrix to the cytoskeleton and
                     cooperate with growth factor receptors to promote celll
                     survival, cell cycle progression and cell migration.
                     Integrins consist of an alpha and a beta...; cd01469"
                     /db_xref="CDD:238746"
     Site            order(149,151,172,252,254,283,313)
                     /site_type="active"
                     /note="integrin inhibitor binding pocket [active]"
                     /db_xref="CDD:238746"
     Site            order(156,158,160,225,258)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238746"
     Site            order(158..160,162,225)
                     /site_type="active"
                     /note="integrin-collagen binding site [active]"
                     /db_xref="CDD:238746"
     Region          453..509
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          516..571
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          581..>605
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          615..1032
                     /region_name="Integrin_alpha2"
                     /note="Integrin alpha; pfam08441"
                     /db_xref="CDD:462478"
     Region          1129..1143
                     /region_name="Integrin_alpha"
                     /note="Integrin alpha cytoplasmic region; pfam00357"
                     /db_xref="CDD:459778"
     CDS             1..1152
                     /gene="ITGAM"
                     /coded_by="XM_061153299.1:112..3570"
                     /db_xref="GeneID:133063657"
ORIGIN      
        1 mnhrilllta lalchgfnld tekavifqnn argfgqsvvq iqgsrlvvga pqevkaanqt
       61 gglyqcdysl grceaislrv ppeavnmslg lslafaanpf rllacgptvh qickenayan
      121 glcflfgsnl rqqprtipea lrgcpqedsd iaflidgsgs ifpedfdrmk kfvstvmsqf
      181 qksktlfslm qysndfrthf tfndfkrnsd pkllvepirq lqgwthtatg irkvvrelfh
      241 ssrgardhal kimivitdge kyldpleyrd vipeadrkgi iryvigvgda frgentqkel
      301 htiaskpsad hvfrvnnfea lktiqnqlqe kifaiegtqt gstssfeyem sqegfsaaft
      361 sdgpllgavg sfdwaggafl htskdkitfi nttrvdsdmn daylgyaaev tlrnrvqslf
      421 lgapryqhvg lvvifrqnag vweknaeikg sqigsyfgas lhsvdvnrdg ssdliligap
      481 hfyeqmrggq vsvcpfprgr akwqcdavlr gepghpwsrf gaaltalgdv ngdrladvai
      541 gapgeqenqg avylfhgtse lginpshsqr itgsqispkl qyfgqslsgg qdltmdglvd
      601 lavgaqghvl llrsqpvlkv eatmeftpke vkrnvyecrd lvikdriagq vkvclqvrks
      661 twdrlgegdt qstityelal dpgrphsqav fdetknntrr hvetlrlrqk cetltirlld
      721 cvedsvtpia lrlnfslvge parnygglrp vlavdalrlf taslpfeknc gndtvcqddl
      781 sitfsfldld tlvvggprdl nvtltvrnqg edsyrtqvtf fypsglsyrr vsagqnqrsh
      841 rswrlacesd vstegsetlk sttcsinhpi fpdnseitfn vtfdvnpdty fgnklllkan
      901 vtsennmpgn nktqfqlelp vkyavymvvt sleastkyln ftasektrhv mehqyqfnnl
      961 grkklpisvv fwipiqlnkv avwsqpqvtf sqnvsggcni tevaprhsdf laelkkspvl
     1021 ncsvavcqri qcaipsfgvq eefkvtlksn lsfdwyiqts hnhlqvvska eilfdeseft
     1081 llpgqdgfvm aqtetkvesy evhnpvplia gssvgglvll alisaglykl gffkrqykdm
     1141 mteagpdaaa pq
//
LOCUS       XP_061009283            1141 aa            linear   MAM 02-DEC-2023
DEFINITION  integrin alpha-M isoform X3 [Dama dama].
ACCESSION   XP_061009283
VERSION     XP_061009283.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153300.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1141
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1141
                     /product="integrin alpha-M isoform X3"
                     /calculated_mol_wt=126640
     Region          100..275
                     /region_name="vWA_integrins_alpha_subunit"
                     /note="Integrins are a class of adhesion receptors that
                     link the extracellular matrix to the cytoskeleton and
                     cooperate with growth factor receptors to promote celll
                     survival, cell cycle progression and cell migration.
                     Integrins consist of an alpha and a beta...; cd01469"
                     /db_xref="CDD:238746"
     Site            order(100,102,123,203,205,234,264)
                     /site_type="active"
                     /note="integrin inhibitor binding pocket [active]"
                     /db_xref="CDD:238746"
     Site            order(107,109,111,176,209)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238746"
     Site            order(109..111,113,176)
                     /site_type="active"
                     /note="integrin-collagen binding site [active]"
                     /db_xref="CDD:238746"
     Region          404..460
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          467..522
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          532..>556
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          566..>876
                     /region_name="Integrin_alpha2"
                     /note="Integrin alpha; pfam08441"
                     /db_xref="CDD:462478"
     Region          1118..1132
                     /region_name="Integrin_alpha"
                     /note="Integrin alpha cytoplasmic region; pfam00357"
                     /db_xref="CDD:459778"
     CDS             1..1141
                     /gene="ITGAM"
                     /coded_by="XM_061153300.1:155..3580"
                     /db_xref="GeneID:133063657"
ORIGIN      
        1 mgstwtqkkq ssskttqgas grawsrfrdp vppeavnmsl glslafaanp frllacgptv
       61 hqickenaya nglcflfgsn lrqqprtipe alrgcpqeds diaflidgsg sifpedfdrm
      121 kkfvstvmsq fqksktlfsl mqysndfrth ftfndfkrns dpkllvepir qlqgwthtat
      181 girkvvrelf hssrgardha lkimivitdg ekyldpleyr dvipeadrkg iiryvigvgd
      241 afrgentqke lhtiaskpsa dhvfrvnnfe alktiqnqlq ekifaiegtq tgstssfeye
      301 msqegfsaaf tsdgpllgav gsfdwaggaf lhtskdkitf inttrvdsdm ndaylgyaae
      361 vtlrnrvqsl flgapryqhv glvvifrqna gvweknaeik gsqigsyfga slhsvdvnrd
      421 gssdliliga phfyeqmrgg qvsvcpfprg rakwqcdavl rgepghpwsr fgaaltalgd
      481 vngdrladva igapgeqenq gavylfhgts elginpshsq ritgsqispk lqyfgqslsg
      541 gqdltmdglv dlavgaqghv lllrsqpvlk veatmeftpk evkrnvyecr dlvikdriag
      601 qvkvclqvrk stwdrlgegd tqstityela ldpgrphsqa vfdetknntr rhvetlrlrq
      661 kcetltirll dcvedsvtpi alrlnfslvg eparnygglr pvlavdalrl ftaslpfekn
      721 cgndtvcqdd lsitfsfldl dtlvvggprd lnvtltvrnq gedsyrtqvt ffypsglsyr
      781 rvsagqnqrs hrswrlaces dvstegsetl ksttcsinhp ifpdnseitf nvtfdvnpdt
      841 yfgnklllka nvtsennmpg nnktqfqlel pvkyavymvv tsleastkyl nftasektrh
      901 vmehqyqysc lenphgqrsl agyspwgcke sdtnevteht cvythfnnlg rkklpisvvf
      961 wipiqlnkva vwsqpqvtfs qnvsggcnit evaprhsdfl aelkkspvln csvavcqriq
     1021 caipsfgvqe efkvtlksnl sfdwyiqtsh nhlqvvskae ilfdeseftl lpgqdgfvma
     1081 qtetkvesye vhnpvpliag ssvgglvlla lisaglyklg ffkrqykdmm teagpdaaap
     1141 q
//
LOCUS       XP_061009284            1168 aa            linear   MAM 02-DEC-2023
DEFINITION  integrin alpha-X-like isoform X1 [Dama dama].
ACCESSION   XP_061009284
VERSION     XP_061009284.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153301.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1168
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1168
                     /product="integrin alpha-X-like isoform X1"
                     /calculated_mol_wt=128423
     Region          158..332
                     /region_name="vWA_integrins_alpha_subunit"
                     /note="Integrins are a class of adhesion receptors that
                     link the extracellular matrix to the cytoskeleton and
                     cooperate with growth factor receptors to promote celll
                     survival, cell cycle progression and cell migration.
                     Integrins consist of an alpha and a beta...; cd01469"
                     /db_xref="CDD:238746"
     Site            order(158,160,181,261,263,291,321)
                     /site_type="active"
                     /note="integrin inhibitor binding pocket [active]"
                     /db_xref="CDD:238746"
     Site            order(165,167,169,234,267)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238746"
     Site            order(167..169,171,234)
                     /site_type="active"
                     /note="integrin-collagen binding site [active]"
                     /db_xref="CDD:238746"
     Region          461..517
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          524..579
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          589..>613
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          623..1039
                     /region_name="Integrin_alpha2"
                     /note="Integrin alpha; pfam08441"
                     /db_xref="CDD:462478"
     Region          1136..1149
                     /region_name="Integrin_alpha"
                     /note="Integrin alpha cytoplasmic region; pfam00357"
                     /db_xref="CDD:459778"
     CDS             1..1168
                     /gene="LOC133063658"
                     /coded_by="XM_061153301.1:102..3608"
                     /db_xref="GeneID:133063658"
ORIGIN      
        1 mptsdllvmt gtqvflfllm aplssfcfnl dteqpttfrv dspgfghsvv qyakwlvvga
       61 pqevkaanqt gglyrcdysm rrceaiplqv ppeavnmslg lsmaattnpf qllacgptvh
      121 hacrenmhlt gicfllaspf qqvqripaal qecpkqdqdi vflidgsgsi ssrdfnkmln
      181 fvkavmsqfq rpssqfslvq fstkttqhft fkdfatssdp lsllnsvwqm qggtftasai
      241 rfvtdllfsa aygarkdask ilivitdgek tenldykdvi praeaagiir yavgvgsafr
      301 ytntlqelid iastpskehi fqvenfdalr diqkqlkeki faiegtqtis sssfelemsq
      361 egfsavfmpd gpvlgavgsf swsggaflyp qnrnptfinm sqehvdmrds ylgystelal
      421 wkgqqnlilg aprhqhtgkv vlftqesrqw rpkaevtgsq igsyfgaslc svdvngdsss
      481 dlvligaphf yeqtqggqvs vcpfpqgrak wqcdavlrge pghpwsrfga altalgdvng
      541 drlvdvaiga pgeqenqgav ylfhgtselg ispshsqrit gaqlspslqy fgqslsggqd
      601 ltqdgladla vgaqghvlll rtrpvlrmgv nihitpaeit rsvyecqqlg tfphdlgeat
      661 vclhvsqspk nqlvnlqsiv tfdltldpgr lspraifqet rirnltrvre lglkqhceav
      721 rlllpdcved svtpiilrln fslvgkptss lrnlqpmlav daqryfttsl pfekncgadh
      781 vcqddlsisf gvsdaslktl ivgsnlelnl kvrvwndged sygtsvtffy ppglsyqrvt
      841 ggqnhlqsrs lrltcdsapa gtqgtrstrc sinhfifreg aqitftvsfh vaptatlgdk
      901 lllaanvsse nnspksskta fqlelpvkya vytvissheq stkylnfsas qeegsrvaqh
      961 ryqvnnlgqr dlpvsihisv paelnqmavw kdivvlnpqn psiqcssert aptesdflth
     1021 ltkkpvldcs iadclrfrcd ipsfgiqeel dfilkgnlsf rwvsqtqqkk vlvvsvaeit
     1081 fnrlvysqlp gqetflraqt elvlekyevy npiplmvgss vggllllali tallykvgff
     1141 krqykemmeg annqtvpene tgdpqvaq
//
LOCUS       XP_061009285            1089 aa            linear   MAM 02-DEC-2023
DEFINITION  integrin alpha-X-like isoform X2 [Dama dama].
ACCESSION   XP_061009285
VERSION     XP_061009285.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153302.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1089
                     /product="integrin alpha-X-like isoform X2"
                     /calculated_mol_wt=119745
     Region          79..253
                     /region_name="vWA_integrins_alpha_subunit"
                     /note="Integrins are a class of adhesion receptors that
                     link the extracellular matrix to the cytoskeleton and
                     cooperate with growth factor receptors to promote celll
                     survival, cell cycle progression and cell migration.
                     Integrins consist of an alpha and a beta...; cd01469"
                     /db_xref="CDD:238746"
     Site            order(79,81,102,182,184,212,242)
                     /site_type="active"
                     /note="integrin inhibitor binding pocket [active]"
                     /db_xref="CDD:238746"
     Site            order(86,88,90,155,188)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238746"
     Site            order(88..90,92,155)
                     /site_type="active"
                     /note="integrin-collagen binding site [active]"
                     /db_xref="CDD:238746"
     Region          382..438
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          445..500
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          510..>534
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          544..960
                     /region_name="Integrin_alpha2"
                     /note="Integrin alpha; pfam08441"
                     /db_xref="CDD:462478"
     Region          1057..1070
                     /region_name="Integrin_alpha"
                     /note="Integrin alpha cytoplasmic region; pfam00357"
                     /db_xref="CDD:459778"
     CDS             1..1089
                     /gene="LOC133063658"
                     /coded_by="XM_061153302.1:342..3611"
                     /db_xref="GeneID:133063658"
ORIGIN      
        1 mrrceaiplq vppeavnmsl glsmaattnp fqllacgptv hhacrenmhl tgicfllasp
       61 fqqvqripaa lqecpkqdqd ivflidgsgs issrdfnkml nfvkavmsqf qrpssqfslv
      121 qfstkttqhf tfkdfatssd plsllnsvwq mqggtftasa irfvtdllfs aaygarkdas
      181 kilivitdge ktenldykdv ipraeaagii ryavgvgsaf rytntlqeli diastpskeh
      241 ifqvenfdal rdiqkqlkek ifaiegtqti ssssfelems qegfsavfmp dgpvlgavgs
      301 fswsggafly pqnrnptfin msqehvdmrd sylgystela lwkgqqnlil gaprhqhtgk
      361 vvlftqesrq wrpkaevtgs qigsyfgasl csvdvngdss sdlvligaph fyeqtqggqv
      421 svcpfpqgra kwqcdavlrg epghpwsrfg aaltalgdvn gdrlvdvaig apgeqenqga
      481 vylfhgtsel gispshsqri tgaqlspslq yfgqslsggq dltqdgladl avgaqghvll
      541 lrtrpvlrmg vnihitpaei trsvyecqql gtfphdlgea tvclhvsqsp knqlvnlqsi
      601 vtfdltldpg rlspraifqe trirnltrvr elglkqhcea vrlllpdcve dsvtpiilrl
      661 nfslvgkpts slrnlqpmla vdaqryftts lpfekncgad hvcqddlsis fgvsdaslkt
      721 livgsnleln lkvrvwndge dsygtsvtff yppglsyqrv tggqnhlqsr slrltcdsap
      781 agtqgtrstr csinhfifre gaqitftvsf hvaptatlgd klllaanvss ennspksskt
      841 afqlelpvky avytvisshe qstkylnfsa sqeegsrvaq hryqvnnlgq rdlpvsihis
      901 vpaelnqmav wkdivvlnpq npsiqcsser taptesdflt hltkkpvldc siadclrfrc
      961 dipsfgiqee ldfilkgnls frwvsqtqqk kvlvvsvaei tfnrlvysql pgqetflraq
     1021 telvlekyev ynpiplmvgs svggllllal itallykvgf fkrqykemme gannqtvpen
     1081 etgdpqvaq
//
LOCUS       XP_061009286             111 aa            linear   MAM 02-DEC-2023
DEFINITION  immortalization up-regulated protein-like [Dama dama].
ACCESSION   XP_061009286
VERSION     XP_061009286.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153303.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..111
                     /product="immortalization up-regulated protein-like"
                     /calculated_mol_wt=11648
     Region          10..86
                     /region_name="IMUP"
                     /note="immortalization up-regulated protein; pfam15761"
                     /db_xref="CDD:464852"
     CDS             1..111
                     /gene="LOC133063660"
                     /coded_by="XM_061153303.1:6..341"
                     /db_xref="GeneID:133063660"
ORIGIN      
        1 mfqknsittm efdlsaaves tskkpqgagk vgdpkhsppk vqggsadnlk hhhghghgqg
       61 stsdssssss dsenevkpgs ephkstpgkv kkpkvkkekk kkeegkkkas h
//
LOCUS       XP_061009287            1166 aa            linear   MAM 02-DEC-2023
DEFINITION  integrin alpha-D-like [Dama dama].
ACCESSION   XP_061009287
VERSION     XP_061009287.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153304.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1166
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1166
                     /product="integrin alpha-D-like"
                     /calculated_mol_wt=127939
     Region          154..329
                     /region_name="vWA_integrins_alpha_subunit"
                     /note="Integrins are a class of adhesion receptors that
                     link the extracellular matrix to the cytoskeleton and
                     cooperate with growth factor receptors to promote celll
                     survival, cell cycle progression and cell migration.
                     Integrins consist of an alpha and a beta...; cd01469"
                     /db_xref="CDD:238746"
     Site            order(154,156,177,257,259,288,318)
                     /site_type="active"
                     /note="integrin inhibitor binding pocket [active]"
                     /db_xref="CDD:238746"
     Site            order(161,163,165,230,263)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238746"
     Site            order(163..165,167,230)
                     /site_type="active"
                     /note="integrin-collagen binding site [active]"
                     /db_xref="CDD:238746"
     Region          458..514
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          521..576
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          586..>610
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          621..>961
                     /region_name="Integrin_alpha2"
                     /note="Integrin alpha; pfam08441"
                     /db_xref="CDD:462478"
     Region          1128..1142
                     /region_name="Integrin_alpha"
                     /note="Integrin alpha cytoplasmic region; pfam00357"
                     /db_xref="CDD:459778"
     CDS             1..1166
                     /gene="LOC133063662"
                     /coded_by="XM_061153304.1:89..3589"
                     /db_xref="GeneID:133063662"
ORIGIN      
        1 msclgmafav vlfltglasy hgfnldveep lvfqedgasf gqsvvqfdks rlvvgaplev
       61 vtvnktgrly dctpatrgcq pislnttsea vdmslglsla asthlsqlla cgptvhkacg
      121 vnmyikgtcl lldshlqiir tvpaalpecp nqeidiafli dgsgsidrad fkrmkdfvra
      181 vmdlskgtdt qfslmqysnl mkthftfsqf qtarnsrslv dpiaqlnglt ftatgiqkvv
      241 relfhrrnga rtnarkiiiv itdgekfkdp lkysdvipea ekaniiryai gvgdafqayt
      301 arqeldiigs tpsddhvfmv dnfaalssiq kqlqekifav egtqstasss fqhemsqegf
      361 ssiltmdgpv lgavgsfsws ggaflypqnk kptfinmsqe hvdmrdsylg ystelalwkg
      421 qqnlilgapr hqhtgkvvlf tqesrqwrpk aevtgsqigs yfgaslcsvd vngdsssdlv
      481 ligaphfyeq tqggqvsvcp fprrrakwkc navlrgepgh pwsrfgaalt algdvngdrl
      541 vdvaigapge qenqgavylf hgtselgisp shsqritgsq lslglqyfgr slsggqdltk
      601 dglvdlavga rghalllrsl pvlkvnvtmk ftppevtkav yqcwdelttt meaghatvcl
      661 tihkssqdrl gdvrcsvtyd laldpgrlis ravfgetknw tltrrktlgl gehcdsmkll
      721 lpdcvedmvn piilrlnfsl vgepiassqn lrpvlavgsq dlftaslpfe kncgqdhlce
      781 gdlsvnlsfs gleilvvgss lelnvivmvs negedsygtv isfyypagls yrrtlaiqqp
      841 gqrplrlace avptrneglk ssscsinhpi fregikgtfm vtfdvsykat lgdklhlran
      901 vssennkpts nkttsqlelp vkyavytvis rqeestkyfn fstsdqkstr eaehryrvnn
      961 lsqrdlaisi hfwvpvllng vavwdvalva psqslpcvse reppqqpdfq tqmpsslvln
     1021 csiadclrfr cdipsfgiqe eldfilkgkl sfgwasqllq kktlvvsmae vtfnrsvytq
     1081 isgqeaflra qvemvleeye vynpmpllvs ssmgglllla litallykcg ffkrqykemm
     1141 dnqpedtaal ngedipsetp dpplse
//
LOCUS       XP_061009288              97 aa            linear   MAM 02-DEC-2023
DEFINITION  cytochrome c oxidase subunit 6A2, mitochondrial [Dama dama].
ACCESSION   XP_061009288
VERSION     XP_061009288.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153305.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..97
                     /product="cytochrome c oxidase subunit 6A2, mitochondrial"
                     /calculated_mol_wt=10697
     Region          13..95
                     /region_name="Cyt_c_Oxidase_VIa"
                     /note="Cytochrome c oxidase subunit VIa. Cytochrome c
                     oxidase (CcO), the terminal oxidase in the respiratory
                     chains of eukaryotes and most bacteria, is a multi-chain
                     transmembrane protein located in the inner membrane of
                     mitochondria and the cell membrane of...; cd00925"
                     /db_xref="CDD:238465"
     Site            order(15..17,19,26..27,30,34)
                     /site_type="other"
                     /note="Subunit VIa/I (of dimer complex) interface
                     [polypeptide binding]"
                     /db_xref="CDD:238465"
     Site            order(25,29,32,44,46..47,53..54,64,66..68,70,73,83..84,88)
                     /site_type="other"
                     /note="Subunit VIa/III interface [polypeptide binding]"
                     /db_xref="CDD:238465"
     Site            29
                     /site_type="other"
                     /note="Subunit VIa/Vb interface [polypeptide binding]"
                     /db_xref="CDD:238465"
     Site            60..63
                     /site_type="other"
                     /note="Subunit VIa/VIb interface [polypeptide binding]"
                     /db_xref="CDD:238465"
     Site            order(64,68..70,72)
                     /site_type="other"
                     /note="Subunit VIa/I interface [polypeptide binding]"
                     /db_xref="CDD:238465"
     CDS             1..97
                     /gene="LOC133063663"
                     /coded_by="XM_061153305.1:25..318"
                     /db_xref="GeneID:133063663"
ORIGIN      
        1 malplrslsr glasaakgdh ggtgartwrf ltfglalpsv alctlnswlh sghrerpafi
       61 pyhhlrirtk pfswgdgnht ffhnprvnpl ptgyekp
//
LOCUS       XP_061009289             940 aa            linear   MAM 02-DEC-2023
DEFINITION  armadillo repeat-containing protein 5 [Dama dama].
ACCESSION   XP_061009289
VERSION     XP_061009289.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153306.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..940
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..940
                     /product="armadillo repeat-containing protein 5"
                     /calculated_mol_wt=97611
     Region          150..182
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          190..225
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          <501..929
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          749..844
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     CDS             1..940
                     /gene="ARMC5"
                     /coded_by="XM_061153306.1:244..3066"
                     /db_xref="GeneID:133063664"
ORIGIN      
        1 maaakstptd slsfclaqlt aaageglggg kdtatnetpl grallalrtr hvkaaggier
       61 frargglrpl lallrraaaa gpapsqagag sapssvesaa ssgpspspgs apsaaspatp
      121 spparlrktl dlalsilanc ctegacraev rrlggilplv tilqcvktds iqnrtaralg
      181 nlamepescg dihsagavpl lvesltacqd sqcrqsvvra lrnladspqh rlalaqqgav
      241 rplaellaaa pdpaltlalv rallelsrgc sracaeqlsl ggglgplvgl ashpkravre
      301 atililanlc aqglvrpalg naggvevllg elrrrrglng aspasqqplv ravcllcrea
      361 inrarlrdag glellmgllr dprasawhpr vvaalvgfly dtgalgrlqa lglvpllagq
      421 lcgeagdeee egreaaswdf peertperae pgsfrslqsw lisegyaagp gdispdwspe
      481 ccppppepvd ltsptslrtp ralrppgrsp tasaaeepwg regpalllls rfsqapdpsg
      541 alvtgpalcg llayvtgapg ppspralril arltcnpacl eafvrsygaa llrawlvlgv
      601 apddwpalrt rqarrsqhqh relgemllqn ltvqaespfg vgalthllls gspedrvaca
      661 ltlpficrkp slwrrllldq gglrlllsal trpaphplfl ffaadslscl qglvsptgsp
      721 adlpaipldl dppspclyep llgpapmpap dlhflldsgl rlpaqraasa taspffrall
      781 agsfaeaqmd lvplrglsps aawpilhhlh gcrgcgaalg pvpppgqpll gseaeealea
      841 agrfllpgle eeleeavgri hlgpqggpes vgevfrlgrp rlaahcarwt lgpeqcprkr
      901 alalvglvea ageeagplte allavvmgve sggkgpsldc
//
LOCUS       XP_061009291             456 aa            linear   MAM 02-DEC-2023
DEFINITION  transforming growth factor beta-1-induced transcript 1 protein
            isoform X1 [Dama dama].
ACCESSION   XP_061009291
VERSION     XP_061009291.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153308.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..456
                     /product="transforming growth factor beta-1-induced
                     transcript 1 protein isoform X1"
                     /calculated_mol_wt=49334
     Region          11..>101
                     /region_name="Paxillin"
                     /note="Paxillin family; pfam03535"
                     /db_xref="CDD:460962"
     Region          223..275
                     /region_name="LIM1_Paxillin_like"
                     /note="The first LIM domain of the paxillin like protein
                     family; cd09336"
                     /db_xref="CDD:259830"
     Site            order(223,226,243,246,249,252,270,273)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:259830"
     Region          282..333
                     /region_name="LIM2_Paxillin_like"
                     /note="The second LIM domain of the paxillin like protein
                     family; cd09337"
                     /db_xref="CDD:188723"
     Site            order(282,285,302,305,308,311,329,332)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188723"
     Region          341..393
                     /region_name="LIM3_Paxillin"
                     /note="The third LIM domain of paxillin; cd09409"
                     /db_xref="CDD:188793"
     Site            order(341,344,361,364,367,370,388,391)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188793"
     Region          400..451
                     /region_name="LIM4_Leupaxin"
                     /note="The fourth LIM domain of Leupaxin; cd09412"
                     /db_xref="CDD:188796"
     Site            order(400,403,420,423,426,429,447,450)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188796"
     CDS             1..456
                     /gene="TGFB1I1"
                     /coded_by="XM_061153308.1:60..1430"
                     /db_xref="GeneID:133063665"
ORIGIN      
        1 medldallsd letttshmpr sgalkerppe pltspltqmg pgessgasgd kdhlystvck
       61 prspkpaapa tppfssscgv lgtglceldr llqelnatqf nitdeimsqf pssketageq
      121 kedqsedkkr pspppspspv lpkpsatsat leldrlmasl sdfrvqnhlp asgptppplp
      181 ssvnedtpsp tgptskgsld tmlgllqsdl srrgvptqak glcgscnkpi agqvvtalgr
      241 awhpehfvcg gcstalggss ffekdgapfc pecyferfsp rcglcnqpir hkmvtalgth
      301 whpehfccvs cgepfgdegf heregrpycr rdflqlfapr cqgcqgpild nyisalsalw
      361 hpdcfvcrec fapfsggsff ehegrplcen hfharrgslc atcglpvtgr cvsalgrrfh
      421 pdhftctfcl rpltkgsfqe ragkpycqpc flklfg
//
LOCUS       XP_061009292             439 aa            linear   MAM 02-DEC-2023
DEFINITION  transforming growth factor beta-1-induced transcript 1 protein
            isoform X2 [Dama dama].
ACCESSION   XP_061009292
VERSION     XP_061009292.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153309.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..439
                     /product="transforming growth factor beta-1-induced
                     transcript 1 protein isoform X2"
                     /calculated_mol_wt=47461
     Region          <23..>84
                     /region_name="Paxillin"
                     /note="Paxillin family; pfam03535"
                     /db_xref="CDD:460962"
     Region          206..258
                     /region_name="LIM1_Paxillin_like"
                     /note="The first LIM domain of the paxillin like protein
                     family; cd09336"
                     /db_xref="CDD:259830"
     Site            order(206,209,226,229,232,235,253,256)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:259830"
     Region          265..316
                     /region_name="LIM2_Paxillin_like"
                     /note="The second LIM domain of the paxillin like protein
                     family; cd09337"
                     /db_xref="CDD:188723"
     Site            order(265,268,285,288,291,294,312,315)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188723"
     Region          324..376
                     /region_name="LIM3_Paxillin"
                     /note="The third LIM domain of paxillin; cd09409"
                     /db_xref="CDD:188793"
     Site            order(324,327,344,347,350,353,371,374)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188793"
     Region          383..434
                     /region_name="LIM4_Leupaxin"
                     /note="The fourth LIM domain of Leupaxin; cd09412"
                     /db_xref="CDD:188796"
     Site            order(383,386,403,406,409,412,430,433)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188796"
     CDS             1..439
                     /gene="TGFB1I1"
                     /coded_by="XM_061153309.1:171..1490"
                     /db_xref="GeneID:133063665"
ORIGIN      
        1 mprsgalker ppepltsplt qmgpgessga sgdkdhlyst vckprspkpa apatppfsss
       61 cgvlgtglce ldrllqelna tqfnitdeim sqfpssketa geqkedqsed kkrpspppsp
      121 spvlpkpsat satleldrlm aslsdfrvqn hlpasgptpp plpssvnedt psptgptskg
      181 sldtmlgllq sdlsrrgvpt qakglcgscn kpiagqvvta lgrawhpehf vcggcstalg
      241 gssffekdga pfcpecyfer fsprcglcnq pirhkmvtal gthwhpehfc cvscgepfgd
      301 egfheregrp ycrrdflqlf aprcqgcqgp ildnyisals alwhpdcfvc recfapfsgg
      361 sffehegrpl cenhfharrg slcatcglpv tgrcvsalgr rfhpdhftct fclrpltkgs
      421 fqeragkpyc qpcflklfg
//
LOCUS       XP_061009293             439 aa            linear   MAM 02-DEC-2023
DEFINITION  transforming growth factor beta-1-induced transcript 1 protein
            isoform X2 [Dama dama].
ACCESSION   XP_061009293
VERSION     XP_061009293.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153310.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..439
                     /product="transforming growth factor beta-1-induced
                     transcript 1 protein isoform X2"
                     /calculated_mol_wt=47461
     Region          <23..>84
                     /region_name="Paxillin"
                     /note="Paxillin family; pfam03535"
                     /db_xref="CDD:460962"
     Region          206..258
                     /region_name="LIM1_Paxillin_like"
                     /note="The first LIM domain of the paxillin like protein
                     family; cd09336"
                     /db_xref="CDD:259830"
     Site            order(206,209,226,229,232,235,253,256)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:259830"
     Region          265..316
                     /region_name="LIM2_Paxillin_like"
                     /note="The second LIM domain of the paxillin like protein
                     family; cd09337"
                     /db_xref="CDD:188723"
     Site            order(265,268,285,288,291,294,312,315)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188723"
     Region          324..376
                     /region_name="LIM3_Paxillin"
                     /note="The third LIM domain of paxillin; cd09409"
                     /db_xref="CDD:188793"
     Site            order(324,327,344,347,350,353,371,374)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188793"
     Region          383..434
                     /region_name="LIM4_Leupaxin"
                     /note="The fourth LIM domain of Leupaxin; cd09412"
                     /db_xref="CDD:188796"
     Site            order(383,386,403,406,409,412,430,433)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188796"
     CDS             1..439
                     /gene="TGFB1I1"
                     /coded_by="XM_061153310.1:138..1457"
                     /db_xref="GeneID:133063665"
ORIGIN      
        1 mprsgalker ppepltsplt qmgpgessga sgdkdhlyst vckprspkpa apatppfsss
       61 cgvlgtglce ldrllqelna tqfnitdeim sqfpssketa geqkedqsed kkrpspppsp
      121 spvlpkpsat satleldrlm aslsdfrvqn hlpasgptpp plpssvnedt psptgptskg
      181 sldtmlgllq sdlsrrgvpt qakglcgscn kpiagqvvta lgrawhpehf vcggcstalg
      241 gssffekdga pfcpecyfer fsprcglcnq pirhkmvtal gthwhpehfc cvscgepfgd
      301 egfheregrp ycrrdflqlf aprcqgcqgp ildnyisals alwhpdcfvc recfapfsgg
      361 sffehegrpl cenhfharrg slcatcglpv tgrcvsalgr rfhpdhftct fclrpltkgs
      421 fqeragkpyc qpcflklfg
//
LOCUS       XP_061009294             529 aa            linear   MAM 02-DEC-2023
DEFINITION  sodium/glucose cotransporter 2 isoform X1 [Dama dama].
ACCESSION   XP_061009294
VERSION     XP_061009294.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153311.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..529
                     /product="sodium/glucose cotransporter 2 isoform X1"
                     /calculated_mol_wt=56371
     Region          <208..529
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
     CDS             1..529
                     /gene="SLC5A2"
                     /coded_by="XM_061153311.1:158..1747"
                     /db_xref="GeneID:133063666"
ORIGIN      
        1 mghhseicpp gkligkgepf snsrkdnlct rgslsglcpl tqagcrragg advhghgadl
       61 rhsrgglrph glrlprggrv fgafrqilag sdvpdgirgs grgqhlqlll stpagllppa
      121 pgpchggpam araasgayyr vqlvlvqrpg hraalpgwek phphqgglhp vrlleadahv
      181 phghaghdqp rslpgrggvr garglrglml avmlaalmss lasifnssst lftmdiytrl
      241 rpragdrell lvgrlwvvfi vavsvawlpv vqaaqggqlf dyiqsvssyl appvsavfvl
      301 alfvprvnek gafwgliggl lmglarlvpe fsfgsgscvr psacpallcr vhylyfaill
      361 fvcsglltlv vslctppipr khlhrlvfsl rhskeeredl daeelegpta apvqngcpeh
      421 avemegkalp pglgagelge psvlrltvrp qflpapptpr pgllrqcllw fcgvsrggag
      481 spprptqeet aaaarrledi sedphwarvv nlnallmmav atflwgfya
//
LOCUS       XP_061009295             630 aa            linear   MAM 02-DEC-2023
DEFINITION  sodium/glucose cotransporter 2 isoform X2 [Dama dama].
ACCESSION   XP_061009295
VERSION     XP_061009295.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153312.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..630
                     /product="sodium/glucose cotransporter 2 isoform X2"
                     /calculated_mol_wt=68600
     Region          1..630
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
     Site            order(30,33,346,349..350)
                     /site_type="other"
                     /note="Na binding site [ion binding]"
                     /db_xref="CDD:271356"
     CDS             1..630
                     /gene="SLC5A2"
                     /coded_by="XM_061153312.1:4..1896"
                     /db_xref="GeneID:133063666"
ORIGIN      
        1 mcrtnrgtvg gyflagrsmv wwpvgaslfa snigsghfvg lagtgaasgl avagfewnal
       61 fvvlllgwlf vpvyltagvi tmpqylrkrf ggrrirlyls vlslflyift kisvdmfsga
      121 vfiqqalgwn iyasviallv itmiytvtgg laalmytdtv qtfvilagaf vlmgyafhev
      181 ggysglfdky lravtsltvs edpavgniss scfrprpdsy hllrdpvtgd lpwpalllgl
      241 tivsswywcs dqvivqrcla gknlthikag cilcgylklm pmflmvmpgm isrvlypdev
      301 acvvpevckr vcgtevgcsn iayprlvvkl mpnglrglml avmlaalmss lasifnssst
      361 lftmdiytrl rpragdrell lvgrlwvvfi vavsvawlpv vqaaqggqlf dyiqsvssyl
      421 appvsavfvl alfvprvnek gafwgliggl lmglarlvpe fsfgsgscvr psacpallcr
      481 vhylyfaill fvcsglltlv vslctppipr khlhrlvfsl rhskeeredl daeelegpta
      541 apvqngcpeh avemeapptp rpgllrqcll wfcgvsrgga gspprptqee taaaarrled
      601 isedphwarv vnlnallmma vatflwgfya
//
LOCUS       XP_061009296             462 aa            linear   MAM 02-DEC-2023
DEFINITION  RUS family member 1 [Dama dama].
ACCESSION   XP_061009296
VERSION     XP_061009296.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153313.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..462
                     /product="RUS family member 1"
                     /calculated_mol_wt=50129
     Region          63..297
                     /region_name="UVB_sens_prot"
                     /note="Vitamin B6 photo-protection and homoeostasis;
                     pfam04884"
                     /db_xref="CDD:428173"
     CDS             1..462
                     /gene="RUSF1"
                     /coded_by="XM_061153313.1:90..1478"
                     /db_xref="GeneID:133063667"
ORIGIN      
        1 madvlcseqf gsgaargcra apdgslqwea wgcswwgfsg aftakpggrd ggggvapgta
       61 tpplsrllav flpqgfpdsv spdylpyqlw dsvqafassl sgslathavl lgigvgdaka
      121 svsaatatwl vkdstgmlgr ivfawwmgsk mdcnakqwrl fadvlndiam fleimapilp
      181 fcftiticis nlakclvgva ggatraaltm hqarrnnmad vsakdgsqet lvnlagllvs
      241 llmlplvsds pslslgcfff ltalhiyany ravralviet lneqrlwlal rhflqrgevl
      301 gptsanqmep lwtgfwssms lslgvplhcv tssvselqql leghrepyll rwdqsrnqvq
      361 vvlsqmagpe ailraathgl vlgalrgdgp lpgeleelrn rvragpekes wlvvrethqv
      421 ldrlfpkflk glqdagwste khqlevdewr atwllspekk vl
//
LOCUS       XP_061009297              92 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-hemoglobin-stabilizing protein [Dama dama].
ACCESSION   XP_061009297
VERSION     XP_061009297.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153314.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..92
                     /product="alpha-hemoglobin-stabilizing protein"
                     /calculated_mol_wt=10607
     Region          5..91
                     /region_name="AHSP"
                     /note="Alpha-haemoglobin stabilising protein; pfam09236"
                     /db_xref="CDD:462718"
     CDS             1..92
                     /gene="AHSP"
                     /coded_by="XM_061153314.1:461..739"
                     /db_xref="GeneID:133063668"
ORIGIN      
        1 maliqtnkdl iskgikefnv llnqqvftdp avseeamvtv vndwvsfyin yykkqmsgeq
       61 eeqdkalqef rqeldtlsas fldkyrdflk ss
//
LOCUS       XP_061009299             526 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 713 isoform X1 [Dama dama].
ACCESSION   XP_061009299
VERSION     XP_061009299.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153316.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..526
                     /product="zinc finger protein 713 isoform X1"
                     /calculated_mol_wt=60802
     Region          109..168
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          231..510
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          337..356
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          364..384
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          392..412
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          420..440
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(425,427,429,431..432,435..436,439,453,455,459..460,
                     463..464,467,481,483,485,487..488,491..492,495)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          448..468
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(448,451,464,468)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          476..496
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          504..522
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..526
                     /gene="ZNF713"
                     /coded_by="XM_061153316.1:16..1596"
                     /db_xref="GeneID:133063669"
ORIGIN      
        1 mriaepepar rgrhcweafv rawlapaagp apgapslgvi gsgiralitf srlgpdgrrr
       61 rlrrqgaepp aapfvqagmp sqdaifsqeg ntekemnvgs qtvmsqeslt fqdvavdftr
      121 eewdqlypaq knlyrdvmle nyrnlvalgh qlykpevitq leqeerwmmg rvsppdthpd
      181 genrpevkks nhnisdenqt hdmimerltg dsfwysilgg lwdfdyqlef nqenqqrylg
      241 qvsfthrkit qerglecsrf renynlnsnl lmqqripsmk iplnsdtqgn sikhnsdliy
      301 yqgnyvrenp yeynecgkif nqhllltshi haegkhsecr kafsqnsslt qpqmiltgek
      361 pykcdecgkr fsqrihliqh qrihtgekpf icnecgkafr qhssftqhlr ihtgekpykc
      421 nqcgkafsri tsltehhrlh tgekpyecsf cgkafsqrth lnqherthtg ekpykcnece
      481 kafsqsahln qhrkihtrek lceynkcekt lshspsltpq hisqnf
//
LOCUS       XP_061009300             448 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 713 isoform X2 [Dama dama].
ACCESSION   XP_061009300
VERSION     XP_061009300.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153317.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..448
                     /product="zinc finger protein 713 isoform X2"
                     /calculated_mol_wt=52483
     Region          31..90
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          153..432
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          259..278
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          286..306
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          314..334
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          329..351
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          342..362
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(347,349,351,353..354,357..358,361,375,377,381..382,
                     385..386,389,403,405,407,409..410,413..414,417)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          370..390
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(370,373,386,390)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          382..407
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          398..418
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          426..444
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..448
                     /gene="ZNF713"
                     /coded_by="XM_061153317.1:239..1585"
                     /db_xref="GeneID:133063669"
ORIGIN      
        1 mpsqdaifsq egntekemnv gsqtvmsqes ltfqdvavdf treewdqlyp aqknlyrdvm
       61 lenyrnlval ghqlykpevi tqleqeerwm mgrvsppdth pdgenrpevk ksnhnisden
      121 qthdmimerl tgdsfwysil gglwdfdyql efnqenqqry lgqvsfthrk itqerglecs
      181 rfrenynlns nllmqqrips mkiplnsdtq gnsikhnsdl iyyqgnyvre npyeynecgk
      241 ifnqhlllts hihaegkhse crkafsqnss ltqpqmiltg ekpykcdecg krfsqrihli
      301 qhqrihtgek pficnecgka frqhssftqh lrihtgekpy kcnqcgkafs ritsltehhr
      361 lhtgekpyec sfcgkafsqr thlnqherth tgekpykcne cekafsqsah lnqhrkihtr
      421 eklceynkce ktlshspslt pqhisqnf
//
LOCUS       XP_061009301             448 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 713 isoform X2 [Dama dama].
ACCESSION   XP_061009301
VERSION     XP_061009301.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153318.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..448
                     /product="zinc finger protein 713 isoform X2"
                     /calculated_mol_wt=52483
     Region          31..90
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          153..432
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          259..278
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          286..306
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          314..334
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          329..351
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          342..362
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(347,349,351,353..354,357..358,361,375,377,381..382,
                     385..386,389,403,405,407,409..410,413..414,417)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          370..390
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(370,373,386,390)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          382..407
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          398..418
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          426..444
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..448
                     /gene="ZNF713"
                     /coded_by="XM_061153318.1:357..1703"
                     /db_xref="GeneID:133063669"
ORIGIN      
        1 mpsqdaifsq egntekemnv gsqtvmsqes ltfqdvavdf treewdqlyp aqknlyrdvm
       61 lenyrnlval ghqlykpevi tqleqeerwm mgrvsppdth pdgenrpevk ksnhnisden
      121 qthdmimerl tgdsfwysil gglwdfdyql efnqenqqry lgqvsfthrk itqerglecs
      181 rfrenynlns nllmqqrips mkiplnsdtq gnsikhnsdl iyyqgnyvre npyeynecgk
      241 ifnqhlllts hihaegkhse crkafsqnss ltqpqmiltg ekpykcdecg krfsqrihli
      301 qhqrihtgek pficnecgka frqhssftqh lrihtgekpy kcnqcgkafs ritsltehhr
      361 lhtgekpyec sfcgkafsqr thlnqherth tgekpykcne cekafsqsah lnqhrkihtr
      421 eklceynkce ktlshspslt pqhisqnf
//
LOCUS       XP_061009302             130 aa            linear   MAM 02-DEC-2023
DEFINITION  small ribosomal subunit protein uS17m [Dama dama].
ACCESSION   XP_061009302
VERSION     XP_061009302.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153319.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..130
                     /product="small ribosomal subunit protein uS17m"
                     /calculated_mol_wt=14284
     Region          11..84
                     /region_name="Ribosomal_uS17"
                     /note="Ribosomal protein uS17; cd00364"
                     /db_xref="CDD:466775"
     CDS             1..130
                     /gene="MRPS17"
                     /coded_by="XM_061153319.1:705..1097"
                     /db_xref="GeneID:133063670"
ORIGIN      
        1 msvvrssvha kwvvgkvigt amqktakvrv trlvldpyll kyfnkrktyf ahdalqqctv
       61 gdivllkalp vprtkhvkhe laeivfkvgq vvdpvtgkrc agttylespv dlettplakn
      121 lgelnlsttq
//
LOCUS       XP_061009303             130 aa            linear   MAM 02-DEC-2023
DEFINITION  small ribosomal subunit protein uS17m [Dama dama].
ACCESSION   XP_061009303
VERSION     XP_061009303.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153320.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..130
                     /product="small ribosomal subunit protein uS17m"
                     /calculated_mol_wt=14284
     Region          11..84
                     /region_name="Ribosomal_uS17"
                     /note="Ribosomal protein uS17; cd00364"
                     /db_xref="CDD:466775"
     CDS             1..130
                     /gene="MRPS17"
                     /coded_by="XM_061153320.1:667..1059"
                     /db_xref="GeneID:133063670"
ORIGIN      
        1 msvvrssvha kwvvgkvigt amqktakvrv trlvldpyll kyfnkrktyf ahdalqqctv
       61 gdivllkalp vprtkhvkhe laeivfkvgq vvdpvtgkrc agttylespv dlettplakn
      121 lgelnlsttq
//
LOCUS       XP_061009304             130 aa            linear   MAM 02-DEC-2023
DEFINITION  small ribosomal subunit protein uS17m [Dama dama].
ACCESSION   XP_061009304
VERSION     XP_061009304.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153321.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..130
                     /product="small ribosomal subunit protein uS17m"
                     /calculated_mol_wt=14284
     Region          11..84
                     /region_name="Ribosomal_uS17"
                     /note="Ribosomal protein uS17; cd00364"
                     /db_xref="CDD:466775"
     CDS             1..130
                     /gene="MRPS17"
                     /coded_by="XM_061153321.1:305..697"
                     /db_xref="GeneID:133063670"
ORIGIN      
        1 msvvrssvha kwvvgkvigt amqktakvrv trlvldpyll kyfnkrktyf ahdalqqctv
       61 gdivllkalp vprtkhvkhe laeivfkvgq vvdpvtgkrc agttylespv dlettplakn
      121 lgelnlsttq
//
LOCUS       XP_061009305             130 aa            linear   MAM 02-DEC-2023
DEFINITION  small ribosomal subunit protein uS17m [Dama dama].
ACCESSION   XP_061009305
VERSION     XP_061009305.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153322.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..130
                     /product="small ribosomal subunit protein uS17m"
                     /calculated_mol_wt=14284
     Region          11..84
                     /region_name="Ribosomal_uS17"
                     /note="Ribosomal protein uS17; cd00364"
                     /db_xref="CDD:466775"
     CDS             1..130
                     /gene="MRPS17"
                     /coded_by="XM_061153322.1:639..1031"
                     /db_xref="GeneID:133063670"
ORIGIN      
        1 msvvrssvha kwvvgkvigt amqktakvrv trlvldpyll kyfnkrktyf ahdalqqctv
       61 gdivllkalp vprtkhvkhe laeivfkvgq vvdpvtgkrc agttylespv dlettplakn
      121 lgelnlsttq
//
LOCUS       XP_061009306             130 aa            linear   MAM 02-DEC-2023
DEFINITION  small ribosomal subunit protein uS17m [Dama dama].
ACCESSION   XP_061009306
VERSION     XP_061009306.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153323.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..130
                     /product="small ribosomal subunit protein uS17m"
                     /calculated_mol_wt=14284
     Region          11..84
                     /region_name="Ribosomal_uS17"
                     /note="Ribosomal protein uS17; cd00364"
                     /db_xref="CDD:466775"
     CDS             1..130
                     /gene="MRPS17"
                     /coded_by="XM_061153323.1:42..434"
                     /db_xref="GeneID:133063670"
ORIGIN      
        1 msvvrssvha kwvvgkvigt amqktakvrv trlvldpyll kyfnkrktyf ahdalqqctv
       61 gdivllkalp vprtkhvkhe laeivfkvgq vvdpvtgkrc agttylespv dlettplakn
      121 lgelnlsttq
//
LOCUS       XP_061009307             286 aa            linear   MAM 02-DEC-2023
DEFINITION  protein NipSnap homolog 2 isoform X1 [Dama dama].
ACCESSION   XP_061009307
VERSION     XP_061009307.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153324.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..286
                     /product="protein NipSnap homolog 2 isoform X1"
                     /calculated_mol_wt=33261
     Region          187..284
                     /region_name="NIPSNAP"
                     /note="pfam07978"
                     /db_xref="CDD:429767"
     CDS             1..286
                     /gene="NIPSNAP2"
                     /coded_by="XM_061153324.1:68..928"
                     /db_xref="GeneID:133063671"
ORIGIN      
        1 maarvlrasg aasasgflrq aspgsllpgl rkltssnnrp redswlkslf vrkvdprkda
       61 hsnllakket sslyklqfhn vkpecleayn kicqevlpki hedkhypctl vgtwntwyge
      121 qdqavhlwry eggypaltev msklkenqef sefrkarsnm llsrknqlll efsfwnepip
      181 rsgpniyelr syqlrpgtmi ewgnywarai rfrqdgneav ggffsqigql ymvhhlwayk
      241 dlqtredirn aawhkhgwee lvyytvpliq emesrimipq ktsplq
//
LOCUS       XP_061009309             247 aa            linear   MAM 02-DEC-2023
DEFINITION  protein NipSnap homolog 2 isoform X2 [Dama dama].
ACCESSION   XP_061009309
VERSION     XP_061009309.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153326.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..247
                     /product="protein NipSnap homolog 2 isoform X2"
                     /calculated_mol_wt=28637
     Region          148..245
                     /region_name="NIPSNAP"
                     /note="pfam07978"
                     /db_xref="CDD:429767"
     CDS             1..247
                     /gene="NIPSNAP2"
                     /coded_by="XM_061153326.1:69..812"
                     /db_xref="GeneID:133063671"
ORIGIN      
        1 maarvlrasg aasasgflrq aspgsllpgl rkltssnnrp redswlkslf vrkvdprkda
       61 hsnllakket sslyklqfkr ccqrfmktsi tlvpwwgpgt rgtesrikle fsefrkarsn
      121 mllsrknqll lefsfwnepi prsgpniyel rsyqlrpgtm iewgnywara irfrqdgnea
      181 vggffsqigq lymvhhlway kdlqtredir naawhkhgwe elvyytvpli qemesrimip
      241 qktsplq
//
LOCUS       XP_061009310             256 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphoserine phosphatase isoform X1 [Dama dama].
ACCESSION   XP_061009310
VERSION     XP_061009310.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153327.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..256
                     /product="phosphoserine phosphatase isoform X1"
                     /calculated_mol_wt=28444
     Region          46..247
                     /region_name="HAD_PSP_eu"
                     /note="phosphoserine phosphatase eukaryotic-like, similar
                     to human phosphoserine phosphatase; cd04309"
                     /db_xref="CDD:319801"
     Site            order(51..55,60,140..141,189,209..210,213..214)
                     /site_type="active"
                     /db_xref="CDD:319801"
     CDS             1..256
                     /gene="PSPH"
                     /coded_by="XM_061153327.1:1..771"
                     /db_xref="GeneID:133063672"
ORIGIN      
        1 mtgerkgkkw eektvvswes steetrkilp kmvshselkn lfcsadavcf dvdstviqee
       61 gidelakfcg vedavsemtr ramggavpfk aalterlali qpsreqvqrl laehpphltp
      121 girelvsrlq ernvqvflis ggfrsivehv asklnipstn vfanrlkfyf ngeyagfdet
      181 qptaesggkg kvikflkekf hfkkiimvgd gatdmeacpp adafigfggn virqqvkdna
      241 ewyitdfiel lgalee
//
LOCUS       XP_061009311             252 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphoserine phosphatase isoform X2 [Dama dama].
ACCESSION   XP_061009311
VERSION     XP_061009311.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153328.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..252
                     /product="phosphoserine phosphatase isoform X2"
                     /calculated_mol_wt=27973
     Region          42..243
                     /region_name="HAD_PSP_eu"
                     /note="phosphoserine phosphatase eukaryotic-like, similar
                     to human phosphoserine phosphatase; cd04309"
                     /db_xref="CDD:319801"
     Site            order(47..51,56,136..137,185,205..206,209..210)
                     /site_type="active"
                     /db_xref="CDD:319801"
     CDS             1..252
                     /gene="PSPH"
                     /coded_by="XM_061153328.1:13..771"
                     /db_xref="GeneID:133063672"
ORIGIN      
        1 mtgkkweekt vvswesstee trkilpkmvs hselknlfcs adavcfdvds tviqeegide
       61 lakfcgveda vsemtrramg gavpfkaalt erlaliqpsr eqvqrllaeh pphltpgire
      121 lvsrlqernv qvflisggfr sivehvaskl nipstnvfan rlkfyfngey agfdetqpta
      181 esggkgkvik flkekfhfkk iimvgdgatd meacppadaf igfggnvirq qvkdnaewyi
      241 tdfiellgal ee
//
LOCUS       XP_061009312             225 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphoserine phosphatase isoform X3 [Dama dama].
ACCESSION   XP_061009312
VERSION     XP_061009312.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153329.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..225
                     /product="phosphoserine phosphatase isoform X3"
                     /calculated_mol_wt=24782
     Region          15..216
                     /region_name="HAD_PSP_eu"
                     /note="phosphoserine phosphatase eukaryotic-like, similar
                     to human phosphoserine phosphatase; cd04309"
                     /db_xref="CDD:319801"
     Site            order(20..24,29,109..110,158,178..179,182..183)
                     /site_type="active"
                     /db_xref="CDD:319801"
     CDS             1..225
                     /gene="PSPH"
                     /coded_by="XM_061153329.1:328..1005"
                     /db_xref="GeneID:133063672"
ORIGIN      
        1 mvshselknl fcsadavcfd vdstviqeeg idelakfcgv edavsemtrr amggavpfka
       61 alterlaliq psreqvqrll aehpphltpg irelvsrlqe rnvqvflisg gfrsivehva
      121 sklnipstnv fanrlkfyfn geyagfdetq ptaesggkgk vikflkekfh fkkiimvgdg
      181 atdmeacppa dafigfggnv irqqvkdnae wyitdfiell galee
//
LOCUS       XP_061009313             531 aa            linear   MAM 02-DEC-2023
DEFINITION  T-complex protein 1 subunit zeta [Dama dama].
ACCESSION   XP_061009313
VERSION     XP_061009313.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153330.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..531
                     /product="T-complex protein 1 subunit zeta"
                     /calculated_mol_wt=57813
     Region          3..530
                     /region_name="chap_CCT_zeta"
                     /note="T-complex protein 1, zeta subunit; TIGR02347"
                     /db_xref="CDD:274088"
     CDS             1..531
                     /gene="CCT6A"
                     /coded_by="XM_061153330.1:104..1699"
                     /db_xref="GeneID:133063673"
ORIGIN      
        1 maavktlnpk aevaraqaal avnisaargl qdvlrtnlgp kgtmkmlvsg agdikltkdg
       61 nvllhemqiq hptasliakv ataqdditgd gttsnvliig ellkqadlyi seglhpriit
      121 egfeaakeka lqfleqvkvs kemdretlid vartslrtkv haeladvlte avvdsilaik
      181 kqdepidlfm veimemkhks etdtslirgl vldhgarhpd mkkrvedayi ltcnvsleye
      241 ktevnsgffy ksaeereklv kaerkfiedr vkkiidlkkk vcgdsdkgfv vinqkgidpf
      301 sldalakegi ialrrakrrn merltlacgg ialnslddln pdclghaglv yeytlgeekf
      361 tfiekcnnpr svtllikgpn khtltqikda irdglravkn aiddgcvvpg agavevamae
      421 alvrhkpsvk graqlgvqaf adalliipkv laqnsgfdlq etlvkvqaeh sesgqlvgvd
      481 lntgepmvaa eagiwdnycv kkqllhsctv iatnillvde imragmsslk g
//
LOCUS       XP_061009314             387 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart
            isoform [Dama dama].
ACCESSION   XP_061009314
VERSION     XP_061009314.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153331.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..387
                     /product="phosphorylase b kinase gamma catalytic chain,
                     skeletal muscle/heart isoform"
                     /calculated_mol_wt=44711
     Region          16..291
                     /region_name="STKc_PhKG1"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Phosphorylase kinase Gamma 1 subunit; cd14182"
                     /db_xref="CDD:271084"
     Site            order(26..27,29..30,32,34,47,49,88,104..105,107,111,113,
                     149..150,152,154..155,157,168,171,183..189,191)
                     /site_type="active"
                     /db_xref="CDD:271084"
     Site            order(26..27,29..30,32,34,47,49,88,104..105,107,111,150,
                     152,154..155,157,168)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271084"
     Site            order(30,111,113,149..150,152,154,171,183..189,191)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271084"
     Site            167..189
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271084"
     CDS             1..387
                     /gene="PHKG1"
                     /coded_by="XM_061153331.1:177..1340"
                     /db_xref="GeneID:133063674"
ORIGIN      
        1 mtqdkslpds ysaqgfyeny epkeilgrgv ssvvrrcihk ptcqeyavki iditgggsfs
       61 seevqelrea tqkevdilrk vsghpniiql kdtyetntff flvfdlmkrg elfdyltekv
      121 tlseketrki mralleviat lhrlnivhrd lkpenilldd nmnikltdfg fscqlepgek
      181 lrevcgtpsy lapeiiecsm nddhpgygke vdmwstgvim ytllagsppf whrkqmlmlr
      241 mimsgnyqfg spewddysdt vkdlvsrflv vspqsrcsae ealahpffqq yvveevrhfs
      301 prgkfkvicl tvlasvriyy qyrrvkpvtr eivirdpyal rplrrliday afriyghwvk
      361 kgqqqnraal fentpkavll slveedf
//
LOCUS       XP_061009315             387 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart
            isoform [Dama dama].
ACCESSION   XP_061009315
VERSION     XP_061009315.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153332.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..387
                     /product="phosphorylase b kinase gamma catalytic chain,
                     skeletal muscle/heart isoform"
                     /calculated_mol_wt=44711
     Region          16..291
                     /region_name="STKc_PhKG1"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Phosphorylase kinase Gamma 1 subunit; cd14182"
                     /db_xref="CDD:271084"
     Site            order(26..27,29..30,32,34,47,49,88,104..105,107,111,113,
                     149..150,152,154..155,157,168,171,183..189,191)
                     /site_type="active"
                     /db_xref="CDD:271084"
     Site            order(26..27,29..30,32,34,47,49,88,104..105,107,111,150,
                     152,154..155,157,168)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271084"
     Site            order(30,111,113,149..150,152,154,171,183..189,191)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271084"
     Site            167..189
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271084"
     CDS             1..387
                     /gene="PHKG1"
                     /coded_by="XM_061153332.1:378..1541"
                     /db_xref="GeneID:133063674"
ORIGIN      
        1 mtqdkslpds ysaqgfyeny epkeilgrgv ssvvrrcihk ptcqeyavki iditgggsfs
       61 seevqelrea tqkevdilrk vsghpniiql kdtyetntff flvfdlmkrg elfdyltekv
      121 tlseketrki mralleviat lhrlnivhrd lkpenilldd nmnikltdfg fscqlepgek
      181 lrevcgtpsy lapeiiecsm nddhpgygke vdmwstgvim ytllagsppf whrkqmlmlr
      241 mimsgnyqfg spewddysdt vkdlvsrflv vspqsrcsae ealahpffqq yvveevrhfs
      301 prgkfkvicl tvlasvriyy qyrrvkpvtr eivirdpyal rplrrliday afriyghwvk
      361 kgqqqnraal fentpkavll slveedf
//
LOCUS       XP_061009316             387 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart
            isoform [Dama dama].
ACCESSION   XP_061009316
VERSION     XP_061009316.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153333.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..387
                     /product="phosphorylase b kinase gamma catalytic chain,
                     skeletal muscle/heart isoform"
                     /calculated_mol_wt=44711
     Region          16..291
                     /region_name="STKc_PhKG1"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Phosphorylase kinase Gamma 1 subunit; cd14182"
                     /db_xref="CDD:271084"
     Site            order(26..27,29..30,32,34,47,49,88,104..105,107,111,113,
                     149..150,152,154..155,157,168,171,183..189,191)
                     /site_type="active"
                     /db_xref="CDD:271084"
     Site            order(26..27,29..30,32,34,47,49,88,104..105,107,111,150,
                     152,154..155,157,168)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271084"
     Site            order(30,111,113,149..150,152,154,171,183..189,191)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271084"
     Site            167..189
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271084"
     CDS             1..387
                     /gene="PHKG1"
                     /coded_by="XM_061153333.1:478..1641"
                     /db_xref="GeneID:133063674"
ORIGIN      
        1 mtqdkslpds ysaqgfyeny epkeilgrgv ssvvrrcihk ptcqeyavki iditgggsfs
       61 seevqelrea tqkevdilrk vsghpniiql kdtyetntff flvfdlmkrg elfdyltekv
      121 tlseketrki mralleviat lhrlnivhrd lkpenilldd nmnikltdfg fscqlepgek
      181 lrevcgtpsy lapeiiecsm nddhpgygke vdmwstgvim ytllagsppf whrkqmlmlr
      241 mimsgnyqfg spewddysdt vkdlvsrflv vspqsrcsae ealahpffqq yvveevrhfs
      301 prgkfkvicl tvlasvriyy qyrrvkpvtr eivirdpyal rplrrliday afriyghwvk
      361 kgqqqnraal fentpkavll slveedf
//
LOCUS       XP_061009317             387 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart
            isoform [Dama dama].
ACCESSION   XP_061009317
VERSION     XP_061009317.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153334.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..387
                     /product="phosphorylase b kinase gamma catalytic chain,
                     skeletal muscle/heart isoform"
                     /calculated_mol_wt=44711
     Region          16..291
                     /region_name="STKc_PhKG1"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Phosphorylase kinase Gamma 1 subunit; cd14182"
                     /db_xref="CDD:271084"
     Site            order(26..27,29..30,32,34,47,49,88,104..105,107,111,113,
                     149..150,152,154..155,157,168,171,183..189,191)
                     /site_type="active"
                     /db_xref="CDD:271084"
     Site            order(26..27,29..30,32,34,47,49,88,104..105,107,111,150,
                     152,154..155,157,168)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271084"
     Site            order(30,111,113,149..150,152,154,171,183..189,191)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271084"
     Site            167..189
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271084"
     CDS             1..387
                     /gene="PHKG1"
                     /coded_by="XM_061153334.1:133..1296"
                     /db_xref="GeneID:133063674"
ORIGIN      
        1 mtqdkslpds ysaqgfyeny epkeilgrgv ssvvrrcihk ptcqeyavki iditgggsfs
       61 seevqelrea tqkevdilrk vsghpniiql kdtyetntff flvfdlmkrg elfdyltekv
      121 tlseketrki mralleviat lhrlnivhrd lkpenilldd nmnikltdfg fscqlepgek
      181 lrevcgtpsy lapeiiecsm nddhpgygke vdmwstgvim ytllagsppf whrkqmlmlr
      241 mimsgnyqfg spewddysdt vkdlvsrflv vspqsrcsae ealahpffqq yvveevrhfs
      301 prgkfkvicl tvlasvriyy qyrrvkpvtr eivirdpyal rplrrliday afriyghwvk
      361 kgqqqnraal fentpkavll slveedf
//
LOCUS       XP_061009319             301 aa            linear   MAM 02-DEC-2023
DEFINITION  inactive C-alpha-formylglycine-generating enzyme 2 [Dama dama].
ACCESSION   XP_061009319
VERSION     XP_061009319.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153336.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..301
                     /product="inactive C-alpha-formylglycine-generating enzyme
                     2"
                     /calculated_mol_wt=33685
     Region          26..291
                     /region_name="FGE-sulfatase"
                     /note="Sulfatase-modifying factor enzyme 1; pfam03781"
                     /db_xref="CDD:397722"
     CDS             1..301
                     /gene="SUMF2"
                     /coded_by="XM_061153336.1:123..1028"
                     /db_xref="GeneID:133063675"
ORIGIN      
        1 mgtslspllt vlsllsgrwl elgngqttnm vqlpggrfqm gtnspdgrdg egpvrevtvk
       61 pfaidifpvt nkdfrefvre kkyrteaevf gwsfvfedlv sdelrnkatq klqsllwwlp
      121 verafwrqpa gpgsgirekl efpvvhvswn daraycawrg krlpteeewe faargglkgq
      181 vypwgnkfqp nrtnlwqgkf pkgdkaedgf hgispvnafp pqndyglydl vgnvwewtas
      241 qyqaadqdmr vlrgaswidt adgsanhrar vttrmgntpd sasdnlgfrc assagrppge
      301 l
//
LOCUS       XP_061009320             153 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil-helix-coiled-coil-helix domain-containing protein 2
            [Dama dama].
ACCESSION   XP_061009320
VERSION     XP_061009320.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153337.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..153
                     /product="coiled-coil-helix-coiled-coil-helix
                     domain-containing protein 2"
                     /calculated_mol_wt=15410
     Region          <4..114
                     /region_name="COG3416"
                     /note="Uncharacterized conserved protein, DUF2076 domain
                     [Function unknown]"
                     /db_xref="CDD:442642"
     CDS             1..153
                     /gene="CHCHD2"
                     /coded_by="XM_061153337.1:111..572"
                     /db_xref="GeneID:133063676"
ORIGIN      
        1 mprgsrsrts rvappasrap qmraaprpap aaqppavapp savgspaaap rqpglmaqma
       61 ttaagvavgs avghtlghai tggfsgggsa epsrpdityq epqgaqpaql qqngpcfyev
      121 kqflecaqsq gdlklcegfs evlkqcrlan gla
//
LOCUS       XP_061009321             652 aa            linear   MAM 02-DEC-2023
DEFINITION  beta-glucuronidase [Dama dama].
ACCESSION   XP_061009321
VERSION     XP_061009321.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153338.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..652
                     /product="beta-glucuronidase"
                     /calculated_mol_wt=74362
     Region          28..628
                     /region_name="Bgal_small_N"
                     /note="Beta galactosidase small chain; cl46900"
                     /db_xref="CDD:481240"
     CDS             1..652
                     /gene="GUSB"
                     /coded_by="XM_061153338.1:151..2109"
                     /db_xref="GeneID:133063677"
ORIGIN      
        1 mlrgpagvwa vlgpllwgcg lallqggmly presrsrerk eldglwsfra dfsdnrrqgf
       61 eqqwyraplr esgptldmpv pssfndvgqd gqlrsfvgwv wyereitlpq rwtedlgmrv
      121 vlrigsahyy aivwvngvhv aehegghlpf eadisklvqs gplsscriti ainntlspht
      181 lppgtilykt dpsmypkgyf vqnikfdffn yaglhrtvll yttpttyidd itvttdmdqd
      241 iglvnyqiiv qgsdhfqldv glldeegkvv akgtgaqgql qvpsahlwwp ylmhehpayl
      301 yslevkltaq tavgpvsdfy tlpvgirtva iterqfling kpfyfqgvnk hedadirgkg
      361 fdwpllvkdf nllrwlgana frtshypyae evlqlcdryg ivvidespgv givsaesfsn
      421 vslqhhlevm eemirrdknh pavvmwslan epasflkpag yyfktliaht kaldpsrpvt
      481 fvtstsyead lgapyvdvic vnsyyswyhd yghmeviqlq latqfenwhk ayqkpmiqse
      541 ygadtiagfh edpplmfsee yqkglleqyh avldqkrkey vvgeliwnfa dfmtnqspfr
      601 mignrkgift rqrqpksaaf llrerywrla netryhrsav ksqcvgnslf tv
//
LOCUS       XP_061009322             470 aa            linear   MAM 02-DEC-2023
DEFINITION  argininosuccinate lyase isoform X1 [Dama dama].
ACCESSION   XP_061009322
VERSION     XP_061009322.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153339.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..470
                     /product="argininosuccinate lyase isoform X1"
                     /calculated_mol_wt=52347
     Region          27..465
                     /region_name="Argininosuccinate_lyase"
                     /note="Argininosuccinate lyase (argininosuccinase, ASAL);
                     cd01359"
                     /db_xref="CDD:176463"
     Site            order(27,31,87,89,112..114,117,159..160,236,279,281,289,
                     291,294,327,329,332,334..335)
                     /site_type="active"
                     /note="active sites [active]"
                     /db_xref="CDD:176463"
     Site            order(102,105,108..109,158..165,171,175..176,182,185..186,
                     189,193,204..208,210,213,227..231,234..235,237,241,244,
                     248,251..252,254..255,258..259,264..265,268,276,282..285,
                     287..289,291,294..295,297..302,304..306,315,317..319,
                     327..330,333,336,347,350,376,381,385,390..391,394,397,443,
                     445..449,457)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:176463"
     CDS             1..470
                     /gene="ASL"
                     /coded_by="XM_061153339.1:128..1540"
                     /db_xref="GeneID:133063679"
ORIGIN      
        1 masesgklwg grfvgsvdpi mekfnssity drhlwevdvq gskaysrgle kaglltkaem
       61 dqilhgldkv aeewaqgtfk lnpndediht anerrlkeli getagklhtg rsrndqvvtd
      121 lrlwmrqncs tlsallceli rtmvdraeae rdvlfpgyth lqraqpirws hwilshaval
      181 trdserllev rkrinvlplg sgaiagnplg vdrellrael dfeaitlnsm datserdfva
      241 eflfwaslcm thlsrmaedl ilygtkefnf vqlsdaystg sslmpqkknp dslelirska
      301 grvfgrssls pqcagllmtl kglpstynkd lqedkeavfe vsdtmsavlq vatgvistlq
      361 ihrdnmgral spdmlatdla yylvrkgmpf rqaheasgka vfmaetkgva lnqlslqelq
      421 tisplfsgdv nhvwdyghsv eqyealggta rssvdwqigq lrallraqqa
//
LOCUS       XP_061009323             464 aa            linear   MAM 02-DEC-2023
DEFINITION  argininosuccinate lyase isoform X2 [Dama dama].
ACCESSION   XP_061009323
VERSION     XP_061009323.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153340.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..464
                     /product="argininosuccinate lyase isoform X2"
                     /calculated_mol_wt=51747
     Region          27..459
                     /region_name="Argininosuccinate_lyase"
                     /note="Argininosuccinate lyase (argininosuccinase, ASAL);
                     cd01359"
                     /db_xref="CDD:176463"
     Site            order(27,31,87,89,112..114,117,159..160,236,279,281,289,
                     291,294,321,323,326,328..329)
                     /site_type="active"
                     /note="active sites [active]"
                     /db_xref="CDD:176463"
     Site            order(102,105,108..109,158..165,171,175..176,182,185..186,
                     189,193,204..208,210,213,227..231,234..235,237,241,244,
                     248,251..252,254..255,258..259,264..265,268,276,282..285,
                     287..289,291,294..295,297..302,304..306,309,311..313,
                     321..324,327,330,341,344,370,375,379,384..385,388,391,437,
                     439..443,451)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:176463"
     CDS             1..464
                     /gene="ASL"
                     /coded_by="XM_061153340.1:128..1522"
                     /db_xref="GeneID:133063679"
ORIGIN      
        1 masesgklwg grfvgsvdpi mekfnssity drhlwevdvq gskaysrgle kaglltkaem
       61 dqilhgldkv aeewaqgtfk lnpndediht anerrlkeli getagklhtg rsrndqvvtd
      121 lrlwmrqncs tlsallceli rtmvdraeae rdvlfpgyth lqraqpirws hwilshaval
      181 trdserllev rkrinvlplg sgaiagnplg vdrellrael dfeaitlnsm datserdfva
      241 eflfwaslcm thlsrmaedl ilygtkefnf vqlsdaystg sslmpqkknp dslelirska
      301 grvfgrcagl lmtlkglpst ynkdlqedke avfevsdtms avlqvatgvi stlqihrdnm
      361 gralspdmla tdlayylvrk gmpfrqahea sgkavfmaet kgvalnqlsl qelqtisplf
      421 sgdvnhvwdy ghsveqyeal ggtarssvdw qigqlrallr aqqa
//
LOCUS       XP_061009324             183 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA-directed RNA polymerase III subunit RPC9 isoform X1 [Dama
            dama].
ACCESSION   XP_061009324
VERSION     XP_061009324.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153341.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..183
                     /product="DNA-directed RNA polymerase III subunit RPC9
                     isoform X1"
                     /calculated_mol_wt=20346
     Region          39..161
                     /region_name="RPOL4c"
                     /note="DNA-directed RNA-polymerase II subunit; smart00657"
                     /db_xref="CDD:128904"
     CDS             1..183
                     /gene="CRCP"
                     /coded_by="XM_061153341.1:1791..2342"
                     /db_xref="GeneID:133063680"
ORIGIN      
        1 mcqtssqalc slnvtilsld hsmgrplghh lsvgltsrkd anaallsnye vfqlltdlke
       61 qrkesgknkh ssgqqnlnti tyetlkyisk tpcrhqspei vrefltamks hkltkaeklq
      121 llnhrpvtav eiqlmveese erlteeqiea llhtvtsilp agpeaeqqqn tsddvamdee
      181 dpa
//
LOCUS       XP_061009325             183 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA-directed RNA polymerase III subunit RPC9 isoform X1 [Dama
            dama].
ACCESSION   XP_061009325
VERSION     XP_061009325.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153342.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..183
                     /product="DNA-directed RNA polymerase III subunit RPC9
                     isoform X1"
                     /calculated_mol_wt=20346
     Region          39..161
                     /region_name="RPOL4c"
                     /note="DNA-directed RNA-polymerase II subunit; smart00657"
                     /db_xref="CDD:128904"
     CDS             1..183
                     /gene="CRCP"
                     /coded_by="XM_061153342.1:1744..2295"
                     /db_xref="GeneID:133063680"
ORIGIN      
        1 mcqtssqalc slnvtilsld hsmgrplghh lsvgltsrkd anaallsnye vfqlltdlke
       61 qrkesgknkh ssgqqnlnti tyetlkyisk tpcrhqspei vrefltamks hkltkaeklq
      121 llnhrpvtav eiqlmveese erlteeqiea llhtvtsilp agpeaeqqqn tsddvamdee
      181 dpa
//
LOCUS       XP_061009326             148 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA-directed RNA polymerase III subunit RPC9 isoform X2 [Dama
            dama].
ACCESSION   XP_061009326
VERSION     XP_061009326.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153343.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..148
                     /product="DNA-directed RNA polymerase III subunit RPC9
                     isoform X2"
                     /calculated_mol_wt=16672
     Region          1..126
                     /region_name="RPOL4c"
                     /note="DNA-directed RNA-polymerase II subunit; smart00657"
                     /db_xref="CDD:128904"
     CDS             1..148
                     /gene="CRCP"
                     /coded_by="XM_061153343.1:129..575"
                     /db_xref="GeneID:133063680"
ORIGIN      
        1 mevkdanaal lsnyevfqll tdlkeqrkes gknkhssgqq nlntityetl kyisktpcrh
       61 qspeivrefl tamkshkltk aeklqllnhr pvtaveiqlm veeseerlte eqieallhtv
      121 tsilpagpea eqqqntsddv amdeedpa
//
LOCUS       XP_061009327              76 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA-directed RNA polymerase III subunit RPC9 isoform X3 [Dama
            dama].
ACCESSION   XP_061009327
VERSION     XP_061009327.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153344.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..76
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..76
                     /product="DNA-directed RNA polymerase III subunit RPC9
                     isoform X3"
                     /calculated_mol_wt=8404
     Region          <1..54
                     /region_name="RPOL4c"
                     /note="DNA-directed RNA-polymerase II subunit; cl00638"
                     /db_xref="CDD:469853"
     CDS             1..76
                     /gene="CRCP"
                     /coded_by="XM_061153344.1:647..877"
                     /db_xref="GeneID:133063680"
ORIGIN      
        1 mkshkltkae klqllnhrpv taveiqlmve eseerlteeq ieallhtvts ilpagpeaeq
       61 qqntsddvam deedpa
//
LOCUS       XP_061009328              76 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA-directed RNA polymerase III subunit RPC9 isoform X3 [Dama
            dama].
ACCESSION   XP_061009328
VERSION     XP_061009328.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153345.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..76
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..76
                     /product="DNA-directed RNA polymerase III subunit RPC9
                     isoform X3"
                     /calculated_mol_wt=8404
     Region          <1..54
                     /region_name="RPOL4c"
                     /note="DNA-directed RNA-polymerase II subunit; cl00638"
                     /db_xref="CDD:469853"
     CDS             1..76
                     /gene="CRCP"
                     /coded_by="XM_061153345.1:191..421"
                     /db_xref="GeneID:133063680"
ORIGIN      
        1 mkshkltkae klqllnhrpv taveiqlmve eseerlteeq ieallhtvts ilpagpeaeq
       61 qqntsddvam deedpa
//
LOCUS       XP_061009329              76 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA-directed RNA polymerase III subunit RPC9 isoform X3 [Dama
            dama].
ACCESSION   XP_061009329
VERSION     XP_061009329.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153346.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..76
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..76
                     /product="DNA-directed RNA polymerase III subunit RPC9
                     isoform X3"
                     /calculated_mol_wt=8404
     Region          <1..54
                     /region_name="RPOL4c"
                     /note="DNA-directed RNA-polymerase II subunit; cl00638"
                     /db_xref="CDD:469853"
     CDS             1..76
                     /gene="CRCP"
                     /coded_by="XM_061153346.1:308..538"
                     /db_xref="GeneID:133063680"
ORIGIN      
        1 mkshkltkae klqllnhrpv taveiqlmve eseerlteeq ieallhtvts ilpagpeaeq
       61 qqntsddvam deedpa
//
LOCUS       XP_061009331             176 aa            linear   MAM 02-DEC-2023
DEFINITION  vitamin K epoxide reductase complex subunit 1-like protein 1 [Dama
            dama].
ACCESSION   XP_061009331
VERSION     XP_061009331.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153348.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..176
                     /product="vitamin K epoxide reductase complex subunit
                     1-like protein 1"
                     /calculated_mol_wt=19701
     Region          18..156
                     /region_name="VKOR_euk"
                     /note="Vitamin K epoxide reductase family in eukaryotes,
                     excluding plants; cd12917"
                     /db_xref="CDD:240600"
     Site            order(50,58,64,139,142)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:240600"
     Site            139..142
                     /site_type="active"
                     /note="redox center [active]"
                     /db_xref="CDD:240600"
     CDS             1..176
                     /gene="VKORC1L1"
                     /coded_by="XM_061153348.1:24..554"
                     /db_xref="GeneID:133063682"
ORIGIN      
        1 maapvllrvs vprwervary avcaagills iyayhverek erdpehralc dlgpwvkcsa
       61 alasrwgrgf gllgsifgkd gvlnqpnsif glifyilqll lgltasavaa lilmtssims
      121 vvgslylayi lyfvlkefci icvityvlnf illiinykrl vylneawkrq lqpkqd
//
LOCUS       XP_061009332             370 aa            linear   MAM 02-DEC-2023
DEFINITION  protein-tyrosine sulfotransferase 1 [Dama dama].
ACCESSION   XP_061009332
VERSION     XP_061009332.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153349.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..370
                     /product="protein-tyrosine sulfotransferase 1"
                     /calculated_mol_wt=42099
     Region          72..261
                     /region_name="Sulfotransfer_3"
                     /note="Sulfotransferase family; pfam13469"
                     /db_xref="CDD:463887"
     CDS             1..370
                     /gene="TPST1"
                     /coded_by="XM_061153349.1:290..1402"
                     /db_xref="GeneID:133063683"
ORIGIN      
        1 mvgklkqnll laclvissvt vfylgqhame chhrieersq plkleniktt vrtvldikan
       61 ktfayhkdmp lifiggvprs gttlmramld ahpdircgee trviprilal kqiwsrsske
      121 kirldeagvt devldsamqa flleiivkhg epapylcnkd pfalksltyl arlfpnakfl
      181 lmvrdgrasv hsmisrkvti agfdlnsyrd cltkwnraie tmynqcmevg ykkcmlvhye
      241 qlvlhperwm rtvlkflqip wnhsvlhhee migkaggvsl skverstdqv ikpvnmgals
      301 kwvgkipsdv lqdmaviapm laklgydpya nppnygkpdp kilentrrvy kgefqlpefl
      361 kekpqseqve
//
LOCUS       XP_061009333             492 aa            linear   MAM 02-DEC-2023
DEFINITION  rab5 GDP/GTP exchange factor isoform X1 [Dama dama].
ACCESSION   XP_061009333
VERSION     XP_061009333.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153350.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..492
                     /product="rab5 GDP/GTP exchange factor isoform X1"
                     /calculated_mol_wt=56852
     Region          17..40
                     /region_name="zf-A20"
                     /note="A20-like zinc finger; pfam01754"
                     /db_xref="CDD:460313"
     Region          159..221
                     /region_name="DUF5601"
                     /note="Domain of unknown function (DUF5601); pfam18151"
                     /db_xref="CDD:465668"
     Region          271..371
                     /region_name="VPS9"
                     /note="Vacuolar sorting protein 9 (VPS9) domain;
                     pfam02204"
                     /db_xref="CDD:460489"
     CDS             1..492
                     /gene="RABGEF1"
                     /coded_by="XM_061153350.1:121..1599"
                     /db_xref="GeneID:133063684"
ORIGIN      
        1 mslkserrgi hvdqsellck kgcgyygnpa wqgfcskcwr eeyhkarqkq iqedwelaer
       61 lqreeeeafa ssqssqgaqs ltfskfeekk tnektrkvtt vkkffsassr vgakkaeiqe
      121 akapspsinr qtsietdrvs kefieflktf hktgqeiykq tklfleamhy krdlsieeqs
      181 ectqdfyqnv aermqtrgkv ppervekimd qiekyimtrl ykyvfcpett ddekkdlaiq
      241 kriralhwvt pqmlcvpvne eipevsdmvv kaitdiiemd skrvprdkla citrcskhif
      301 naikitksep asaddflptl iyivlkgnpp rlqsniqyit rfcnpsrlmt gedgyyftnl
      361 ccavafiekl daqslnlsqe dfdrymsgqt sprkqesesw spdaclgvkq myknldllsq
      421 lnerqerimn eakklekdli dwtdgiakev qdivekyple irppnqsvaa idsenvendk
      481 lppplqpqvy ag
//
LOCUS       XP_061009334             492 aa            linear   MAM 02-DEC-2023
DEFINITION  rab5 GDP/GTP exchange factor isoform X1 [Dama dama].
ACCESSION   XP_061009334
VERSION     XP_061009334.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153351.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..492
                     /product="rab5 GDP/GTP exchange factor isoform X1"
                     /calculated_mol_wt=56852
     Region          17..40
                     /region_name="zf-A20"
                     /note="A20-like zinc finger; pfam01754"
                     /db_xref="CDD:460313"
     Region          159..221
                     /region_name="DUF5601"
                     /note="Domain of unknown function (DUF5601); pfam18151"
                     /db_xref="CDD:465668"
     Region          271..371
                     /region_name="VPS9"
                     /note="Vacuolar sorting protein 9 (VPS9) domain;
                     pfam02204"
                     /db_xref="CDD:460489"
     CDS             1..492
                     /gene="RABGEF1"
                     /coded_by="XM_061153351.1:108..1586"
                     /db_xref="GeneID:133063684"
ORIGIN      
        1 mslkserrgi hvdqsellck kgcgyygnpa wqgfcskcwr eeyhkarqkq iqedwelaer
       61 lqreeeeafa ssqssqgaqs ltfskfeekk tnektrkvtt vkkffsassr vgakkaeiqe
      121 akapspsinr qtsietdrvs kefieflktf hktgqeiykq tklfleamhy krdlsieeqs
      181 ectqdfyqnv aermqtrgkv ppervekimd qiekyimtrl ykyvfcpett ddekkdlaiq
      241 kriralhwvt pqmlcvpvne eipevsdmvv kaitdiiemd skrvprdkla citrcskhif
      301 naikitksep asaddflptl iyivlkgnpp rlqsniqyit rfcnpsrlmt gedgyyftnl
      361 ccavafiekl daqslnlsqe dfdrymsgqt sprkqesesw spdaclgvkq myknldllsq
      421 lnerqerimn eakklekdli dwtdgiakev qdivekyple irppnqsvaa idsenvendk
      481 lppplqpqvy ag
//
LOCUS       XP_061009336             491 aa            linear   MAM 02-DEC-2023
DEFINITION  rab5 GDP/GTP exchange factor isoform X2 [Dama dama].
ACCESSION   XP_061009336
VERSION     XP_061009336.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153353.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..491
                     /product="rab5 GDP/GTP exchange factor isoform X2"
                     /calculated_mol_wt=56781
     Region          17..40
                     /region_name="zf-A20"
                     /note="A20-like zinc finger; pfam01754"
                     /db_xref="CDD:460313"
     Region          158..220
                     /region_name="DUF5601"
                     /note="Domain of unknown function (DUF5601); pfam18151"
                     /db_xref="CDD:465668"
     Region          270..370
                     /region_name="VPS9"
                     /note="Vacuolar sorting protein 9 (VPS9) domain;
                     pfam02204"
                     /db_xref="CDD:460489"
     CDS             1..491
                     /gene="RABGEF1"
                     /coded_by="XM_061153353.1:121..1596"
                     /db_xref="GeneID:133063684"
ORIGIN      
        1 mslkserrgi hvdqsellck kgcgyygnpa wqgfcskcwr eeyhkarqkq iqedwelaer
       61 lqreeeeafa ssqssqgaqs ltfskfeekk tnektrkvtt vkkffsassr vgakkeiqea
      121 kapspsinrq tsietdrvsk efieflktfh ktgqeiykqt klfleamhyk rdlsieeqse
      181 ctqdfyqnva ermqtrgkvp pervekimdq iekyimtrly kyvfcpettd dekkdlaiqk
      241 riralhwvtp qmlcvpvnee ipevsdmvvk aitdiiemds krvprdklac itrcskhifn
      301 aikitksepa saddflptli yivlkgnppr lqsniqyitr fcnpsrlmtg edgyyftnlc
      361 cavafiekld aqslnlsqed fdrymsgqts prkqesesws pdaclgvkqm yknldllsql
      421 nerqerimne akklekdlid wtdgiakevq divekyplei rppnqsvaai dsenvendkl
      481 ppplqpqvya g
//
LOCUS       XP_061009337             362 aa            linear   MAM 02-DEC-2023
DEFINITION  rab5 GDP/GTP exchange factor isoform X3 [Dama dama].
ACCESSION   XP_061009337
VERSION     XP_061009337.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153354.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..362
                     /product="rab5 GDP/GTP exchange factor isoform X3"
                     /calculated_mol_wt=42058
     Region          17..40
                     /region_name="zf-A20"
                     /note="A20-like zinc finger; pfam01754"
                     /db_xref="CDD:460313"
     Region          159..221
                     /region_name="DUF5601"
                     /note="Domain of unknown function (DUF5601); pfam18151"
                     /db_xref="CDD:465668"
     Region          271..361
                     /region_name="VPS9"
                     /note="Vacuolar sorting protein 9 (VPS9) domain;
                     pfam02204"
                     /db_xref="CDD:460489"
     CDS             1..362
                     /gene="RABGEF1"
                     /coded_by="XM_061153354.1:121..1209"
                     /db_xref="GeneID:133063684"
ORIGIN      
        1 mslkserrgi hvdqsellck kgcgyygnpa wqgfcskcwr eeyhkarqkq iqedwelaer
       61 lqreeeeafa ssqssqgaqs ltfskfeekk tnektrkvtt vkkffsassr vgakkaeiqe
      121 akapspsinr qtsietdrvs kefieflktf hktgqeiykq tklfleamhy krdlsieeqs
      181 ectqdfyqnv aermqtrgkv ppervekimd qiekyimtrl ykyvfcpett ddekkdlaiq
      241 kriralhwvt pqmlcvpvne eipevsdmvv kaitdiiemd skrvprdkla citrcskhif
      301 naikitksep asaddflptl iyivlkgnpp rlqsniqyit rfcnpsrlmt gedgyyftnl
      361 dt
//
LOCUS       XP_061009338             297 aa            linear   MAM 02-DEC-2023
DEFINITION  BTB/POZ domain-containing protein KCTD7 isoform X1 [Dama dama].
ACCESSION   XP_061009338
VERSION     XP_061009338.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153355.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..297
                     /product="BTB/POZ domain-containing protein KCTD7 isoform
                     X1"
                     /calculated_mol_wt=34022
     Region          48..139
                     /region_name="BTB_POZ_KCTD7"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in potassium
                     channel tetramerization domain-containing protein 7
                     (KCTD7); cd18366"
                     /db_xref="CDD:349675"
     CDS             1..297
                     /gene="KCTD7"
                     /coded_by="XM_061153355.1:23..916"
                     /db_xref="GeneID:133063685"
ORIGIN      
        1 mvvvtgrepd srrpdgamss sdaeddflep atptatqagh alpllpqefp evvplnigga
       61 hfttrlstlr ryedtmlaam fsgrhyiptd aegryfidrd gthfgdvlnf lrsgdlppre
      121 rvravykeaq yyaigplleq lenmqplkge kvrqaflglm pyykdhleri veiarlravq
      181 rkarfaklkv cvfkeempit pyecpllnsl rfersesdgq lfehhcevdv sfgpweavad
      241 vydllhclvt dlsaqgltvd hqcigvcdkh lvnhyyckrp iyefkitwwk rvhlmlh
//
LOCUS       XP_061009339             294 aa            linear   MAM 02-DEC-2023
DEFINITION  BTB/POZ domain-containing protein KCTD7 isoform X2 [Dama dama].
ACCESSION   XP_061009339
VERSION     XP_061009339.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153356.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..294
                     /product="BTB/POZ domain-containing protein KCTD7 isoform
                     X2"
                     /calculated_mol_wt=33676
     Region          48..139
                     /region_name="BTB_POZ_KCTD7"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in potassium
                     channel tetramerization domain-containing protein 7
                     (KCTD7); cd18366"
                     /db_xref="CDD:349675"
     CDS             1..294
                     /gene="KCTD7"
                     /coded_by="XM_061153356.1:23..907"
                     /db_xref="GeneID:133063685"
ORIGIN      
        1 mvvvtgrepd srrpdgamss sdaeddflep atptatqagh alpllpqefp evvplnigga
       61 hfttrlstlr ryedtmlaam fsgrhyiptd aegryfidrd gthfgdvlnf lrsgdlppre
      121 rvravykeaq yyaigplleq lenmqplkge kvrqaflglm pyykdhleri veiarlravq
      181 rkarfaklkv cvfkeempit pyecpllnsl rfersesdgq lfehhcevdv sfgpweavad
      241 vydllhclvt dlsaqgltvd hqcigvcdkh lvnhyyckrp iyefkitwwr vlyh
//
LOCUS       XP_061009340             341 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 248 isoform X1 [Dama dama].
ACCESSION   XP_061009340
VERSION     XP_061009340.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153357.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..341
                     /product="transmembrane protein 248 isoform X1"
                     /calculated_mol_wt=37964
     Region          37..284
                     /region_name="TMEM219"
                     /note="Transmembrane 219; pfam14940"
                     /db_xref="CDD:464388"
     CDS             1..341
                     /gene="TMEM248"
                     /coded_by="XM_061153357.1:16..1041"
                     /db_xref="GeneID:133063686"
ORIGIN      
        1 maglstsgae awiiwiwhge rvelirimfs inplenlkly issrpplvvf misvsamaia
       61 fltlgyffki keikspemae dwntfllrfn dldlcvsene tlkhltndta alestvtsgq
      121 artstqspqa ledagpvnis vaitltldpl kpfggysrnv thlystilgh qvglsgreaq
      181 eeinitftlp tswssddcal hghceqvvft acmtltahpg vfpvtvqpph cvpdtysnat
      241 lwykifttar dantkyaqdy npfwcykgai gkvyhalnpk ltvivpdddr slinlhlmht
      301 syflfvmvit mfcyavikgr psklrqsnpe fcpekvalad a
//
LOCUS       XP_061009341             332 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 248 isoform X2 [Dama dama].
ACCESSION   XP_061009341
VERSION     XP_061009341.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153358.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..332
                     /product="transmembrane protein 248 isoform X2"
                     /calculated_mol_wt=36302
     Region          <89..275
                     /region_name="TMEM219"
                     /note="Transmembrane 219; pfam14940"
                     /db_xref="CDD:464388"
     CDS             1..332
                     /gene="TMEM248"
                     /coded_by="XM_061153358.1:16..1014"
                     /db_xref="GeneID:133063686"
ORIGIN      
        1 msvsilsrgp aeaqggpqvl kksekeeqpg gadqnnvqhq ppgepeavhq qpaapggvhd
       61 qrqrhgdrfp dlglflqdqg dqvtrdgren etlkhltndt aalestvtsg qartstqspq
      121 aledagpvni svaitltldp lkpfggysrn vthlystilg hqvglsgrea qeeinitftl
      181 ptswssddca lhghceqvvf tacmtltahp gvfpvtvqpp hcvpdtysna tlwykiftta
      241 rdantkyaqd ynpfwcykga igkvyhalnp kltvivpddd rslinlhlmh tsyflfvmvi
      301 tmfcyavikg rpsklrqsnp efcpekvala da
//
LOCUS       XP_061009342             325 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 248 isoform X3 [Dama dama].
ACCESSION   XP_061009342
VERSION     XP_061009342.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153359.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..325
                     /product="transmembrane protein 248 isoform X3"
                     /calculated_mol_wt=35691
     Region          <82..268
                     /region_name="TMEM219"
                     /note="Transmembrane 219; pfam14940"
                     /db_xref="CDD:464388"
     CDS             1..325
                     /gene="TMEM248"
                     /coded_by="XM_061153359.1:16..993"
                     /db_xref="GeneID:133063686"
ORIGIN      
        1 maglstsgae awiiwiwhge rvggadqnnv qhqppgepea vhqqpaapgg vhdqrqrhgd
       61 rfpdlglflq dqgdqvtrdg renetlkhlt ndtaalestv tsgqartstq spqaledagp
      121 vnisvaitlt ldplkpfggy srnvthlyst ilghqvglsg reaqeeinit ftlptswssd
      181 dcalhghceq vvftacmtlt ahpgvfpvtv qpphcvpdty snatlwykif ttardantky
      241 aqdynpfwcy kgaigkvyha lnpkltvivp dddrslinlh lmhtsyflfv mvitmfcyav
      301 ikgrpsklrq snpefcpekv alada
//
LOCUS       XP_061009343             314 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 248 isoform X4 [Dama dama].
ACCESSION   XP_061009343
VERSION     XP_061009343.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153360.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..314
                     /product="transmembrane protein 248 isoform X4"
                     /calculated_mol_wt=34886
     Region          10..257
                     /region_name="TMEM219"
                     /note="Transmembrane 219; pfam14940"
                     /db_xref="CDD:464388"
     CDS             1..314
                     /gene="TMEM248"
                     /coded_by="XM_061153360.1:92..1036"
                     /db_xref="GeneID:133063686"
ORIGIN      
        1 mfsinplenl klyissrppl vvfmisvsam aiafltlgyf fkikeikspe maedwntfll
       61 rfndldlcvs enetlkhltn dtaalestvt sgqartstqs pqaledagpv nisvaitltl
      121 dplkpfggys rnvthlysti lghqvglsgr eaqeeinitf tlptswssdd calhghceqv
      181 vftacmtlta hpgvfpvtvq pphcvpdtys natlwykift tardantkya qdynpfwcyk
      241 gaigkvyhal npkltvivpd ddrslinlhl mhtsyflfvm vitmfcyavi kgrpsklrqs
      301 npefcpekva lada
//
LOCUS       XP_061009344             408 aa            linear   MAM 02-DEC-2023
DEFINITION  SH3 domain-binding protein 5-like [Dama dama].
ACCESSION   XP_061009344
VERSION     XP_061009344.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153361.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..408
                     /product="SH3 domain-binding protein 5-like"
                     /calculated_mol_wt=45044
     Region          77..306
                     /region_name="SH3BP5"
                     /note="SH3 domain-binding protein 5 (SH3BP5); pfam05276"
                     /db_xref="CDD:461608"
     CDS             1..408
                     /gene="LOC133063687"
                     /coded_by="XM_061153361.1:1156..2382"
                     /db_xref="GeneID:133063687"
ORIGIN      
        1 mlgpwsqhvs pllclglcll pasmaelrqi pagwetpqgq lrpevvedev prspvaeepg
       61 gggsnsseak lspreeeeld priqeelehl nqaseeinqv elqldeartt yrrilqesar
      121 klntqgshlg sciekarpyy earrlakeaq qetqkaalry eravsmhnaa remvfvaeqg
      181 vmadknrldp twqemlnhat ckvneaeeer lrgerehqrv trlcqqaear vqalqktlrr
      241 aigksrpyfa lkaqfsqile ehkakvmele qqvaqaktry svalrnleqi seqiharrrg
      301 qpahtpgqrr sspvgaeagp dggedadsgi iegaegggle egvslgpgpa ldtdtlslls
      361 lrtvasdlqk cdsvehlrgl sdhtsldgqe lgprsggrgg rhqrsisl
//
LOCUS       XP_061009345             250 aa            linear   MAM 02-DEC-2023
DEFINITION  ribosome maturation protein SBDS [Dama dama].
ACCESSION   XP_061009345
VERSION     XP_061009345.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153362.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..250
                     /product="ribosome maturation protein SBDS"
                     /calculated_mol_wt=28628
     Region          1..>223
                     /region_name="PTZ00448"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:185627"
     CDS             1..250
                     /gene="SBDS"
                     /coded_by="XM_061153362.1:205..957"
                     /db_xref="GeneID:133063689"
ORIGIN      
        1 msiftptnqi rltnvavvrm kragkrfeia cyknkvvgwr sgvekdldev lqthsvfvnv
       61 skgqvakked lisafgtddq teickqiltk gevqvsdker htqleqmfrd iativadkcv
      121 npetkrpytv ilieramkdi hysvkpnkst kqqalevikq lkekmkiera hmrlrfilpv
      181 negkklkekl kplikviese dygqqleivc lidpgcfrei delikketkg kgslevlnlk
      241 dveegdekfe
//
LOCUS       XP_061009346             734 aa            linear   MAM 02-DEC-2023
DEFINITION  S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase
            TYW1 [Dama dama].
ACCESSION   XP_061009346
VERSION     XP_061009346.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153363.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..734
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..734
                     /product="S-adenosyl-L-methionine-dependent tRNA
                     4-demethylwyosine synthase TYW1"
                     /calculated_mol_wt=83736
     Region          80..>239
                     /region_name="CysJ"
                     /note="Flavoprotein (flavin reductase) subunit CysJ of
                     sulfite and N-hydroxylaminopurine reductases [Nucleotide
                     transport and metabolism, Inorganic ion transport and
                     metabolism]; COG0369"
                     /db_xref="CDD:440138"
     Region          362..658
                     /region_name="rSAM_TYW1"
                     /note="wyosine biosynthesis protein TYW1; TIGR03972"
                     /db_xref="CDD:274890"
     CDS             1..734
                     /gene="LOC133063690"
                     /coded_by="XM_061153363.1:159..2363"
                     /db_xref="GeneID:133063690"
ORIGIN      
        1 mdpaldtwdf splislwinr fyiylgfafg fslwicfqiv irkqnknsqd ktipkasqdl
       61 mtngyisrpk kevfvsgvki fygsqtgtak gfatilaeal ssldlpvami nlkdydpddh
      121 lveevtsknv caflvatytd gqppesaewf ckwleeaand frfgktylkg mryavfglgn
      181 svyvshfnkv gknvdkwlwm lgahrvmtrg egdgnvvksk hgsieadfta wkakfisrll
      241 alckgegkrc rgsckkgkce ssqrgseaae pgshareelh hrdaelmfqe eepfesssee
      301 esdaedrqsr nsvvdvedlg kimdhvkkek rekeqheget gvtrslvkse aserramitp
      361 alrealtkqg yqligshsgv klcrwtksml rgrggcykht fygieshrcm ettpslacan
      421 kcvfcwrhht npvgtewrwk mdqpemilke aienhqnmik qfkgvpgvke erfeegmtvk
      481 hcalslvgep imypeinkfl kllheckiss flvtnaqfpa eirdlkpvtq lyvsvdastk
      541 dslkkidrpl fkdfwqrfld slkalaakqq rtvyrltlvk awnvdelqay aelvslgnpd
      601 fievkgvtyc gessassltm anvpwheevv rfvcelvdli pdyeiacehe hsnclliahk
      661 kfkigrewwt widysrfqel iqeyedsggs ktfsakdyma ktphwalfga nergfdpkdt
      721 ryqrknkskd isgc
//
LOCUS       XP_061009347             219 aa            linear   MAM 02-DEC-2023
DEFINITION  calcium-binding protein 8 [Dama dama].
ACCESSION   XP_061009347
VERSION     XP_061009347.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153364.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..219
                     /product="calcium-binding protein 8"
                     /calculated_mol_wt=24706
     Region          32..>142
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..219
                     /gene="CALN1"
                     /coded_by="XM_061153364.1:69..728"
                     /db_xref="GeneID:133063691"
ORIGIN      
        1 mpfhhvtagl lykgnylnrs lsagsdseql anisveelde ireafrvldr dgngfiskqe
       61 lgmamrslgy mpsevelaii mqrldmdgdg qvdfdefmti lgpklvsseg rdgflgntid
      121 sifwqfdmqr itleelkhil yhafrdhltm kdieniiine eeslnetsgn cqtefegvhs
      181 qkqnrqtcvr kslicafama fiisvmliaa nqilrsgme
//
LOCUS       XP_061009349            1262 aa            linear   MAM 02-DEC-2023
DEFINITION  autism susceptibility gene 2 protein [Dama dama].
ACCESSION   XP_061009349
VERSION     XP_061009349.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153366.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1262
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1262
                     /product="autism susceptibility gene 2 protein"
                     /calculated_mol_wt=137475
     Region          643..855
                     /region_name="Auts2"
                     /note="Autism susceptibility gene 2 protein; pfam15336"
                     /db_xref="CDD:464656"
     Region          878..>996
                     /region_name="PRK07735"
                     /note="NADH-quinone oxidoreductase subunit C"
                     /db_xref="CDD:236081"
     CDS             1..1262
                     /gene="AUTS2"
                     /coded_by="XM_061153366.1:1..3789"
                     /db_xref="GeneID:133063692"
ORIGIN      
        1 mdgptrghgl rkkrrsrsqr drerrsrggl gagaagggga grtrapslas ssgsdkedng
       61 kppssapsrp rpprrkrres tsaeediidg famtsfvtfe alekdvalkp qervekrqtp
      121 ltkkkrealt nglsfhskks rlshphhyss drendrnlcq hlgkrkkmpk glrqlkpgqn
      181 scrdsdsesa sgeskgfhrs ssrerlsdss apsslgtgyf cdsdsdqeek asdasseklf
      241 ntvinkdpel gvgalphhdg hdagpivpkv sglersqeks qdcgkeplfe pvvlkdarpq
      301 vpppppqpqa epqprapspd pasgpraepp pppprpgaqp ppappeaspq pappqaprpp
      361 rpqspgplpp qalppaqahp saqslpqpls aynssslsln slsssrsstp aktqpapphi
      421 shhpsaspfp lslpnhsplh sftptlqppa hshhpnmfap ptalpppppl tsgslqvpgh
      481 pagstyseqd llrqelntrf lasqsadrga slgpppylrt efhqhqhqhq hthqhthqht
      541 ftpfphalpp taimptpapp mfdkyptkvd pfyrhslfhs yppavsgipp mipptgpfgs
      601 lqgafqpkts npidvatrpg tvphtllqkd prltdpfrpm lrkpgkwcam hvhiawqiyh
      661 hqqkvkkqmq sdphkldfgl kpeflsrppg pslfgaihhp hdlarpstlf saagaahppg
      721 tpfgppphhs nflnpaahle pfnrpstftg laavggnafg glgnpsvtpn svfghkdgps
      781 vqsfsnphep wnrlhrtpps fptpppwlkp gelersasaa ahdrdrdvdk rdssvskddk
      841 eresvekrhs shpspapvlp vstlghgrss geqirghlst earekdkckd rerehsesrk
      901 dlgadehkak egplaekdgh ghegraagee akqlarvpsp yarapaadsa rpgsaasrda
      961 eprkgepaye npkksaeikv keerkedhdl ppeappthrs sepppppppp sssagvhpgp
     1021 lasmpvavgm pgihpmnsis gldrtrmmtp fmglspipgg erfpypsfhw dpirdplrdp
     1081 yrdldihrrd plgrdfllrn dplhrlsapr lyeadrsfrd rephdyshhh hhhhhhplav
     1141 dprreheraa hldererlha lredyehprl havhaapldg plpppgllap glpsvhypri
     1201 sptagpqngl lskapptaal sappplistl ggrpvsprrt tplsaeirer ppshtlkdie
     1261 ar
//
LOCUS       XP_061009350             329 aa            linear   MAM 02-DEC-2023
DEFINITION  cytosolic arginine sensor for mTORC1 subunit 2 [Dama dama].
ACCESSION   XP_061009350
VERSION     XP_061009350.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153367.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..329
                     /product="cytosolic arginine sensor for mTORC1 subunit 2"
                     /calculated_mol_wt=36027
     Region          9..69
                     /region_name="Castor1_N"
                     /note="Cytosolic arginine sensor for mTORC1 subunit 1
                     N-terminal domain; pfam18700"
                     /db_xref="CDD:465837"
     Region          71..141
                     /region_name="ACT_7"
                     /note="ACT domain; pfam13840"
                     /db_xref="CDD:433519"
     Region          260..321
                     /region_name="ACT_7"
                     /note="ACT domain; pfam13840"
                     /db_xref="CDD:433519"
     CDS             1..329
                     /gene="CASTOR2"
                     /coded_by="XM_061153367.1:44..1033"
                     /db_xref="GeneID:133063695"
ORIGIN      
        1 melhilehrl qvasvakesi plftyglikl aflssktrck ffsltetped ytiivdeegf
       61 lelpssehls vadatwlaln vvsgggsfss sqpigvtkia ksviapladq nisvfmlsty
      121 qtdfilvrer dlpfvthtls seftilrvvn getvaaenlg itngfvkpkm vqrpvihpls
      181 spsnrfcvts ldpdtlptva tllmdvmfys ngvkdplvsg ddcdhirffs fsliegyisl
      241 vmdvqtqqrf psnllftsas gelwkmvrig gqplgfdecg ivaqisepla aadipayyis
      301 tfkfdhalvp eeningvisa lkvsqaekh
//
LOCUS       XP_061009351             477 aa            linear   MAM 02-DEC-2023
DEFINITION  RCC1-like G exchanging factor-like protein isoform X1 [Dama dama].
ACCESSION   XP_061009351
VERSION     XP_061009351.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153368.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..477
                     /product="RCC1-like G exchanging factor-like protein
                     isoform X1"
                     /calculated_mol_wt=51157
     Region          <55..287
                     /region_name="ATS1"
                     /note="Alpha-tubulin suppressor ATS1 and related RCC1
                     domain-containing proteins [Cell cycle control, cell
                     division, chromosome partitioning, Cytoskeleton]; COG5184"
                     /db_xref="CDD:444065"
     Region          187..474
                     /region_name="ATS1"
                     /note="Alpha-tubulin suppressor ATS1 and related RCC1
                     domain-containing proteins [Cell cycle control, cell
                     division, chromosome partitioning, Cytoskeleton]; COG5184"
                     /db_xref="CDD:444065"
     CDS             1..477
                     /gene="RCC1L"
                     /coded_by="XM_061153368.1:16..1449"
                     /db_xref="GeneID:133063696"
ORIGIN      
        1 mgvatlatga rlgrrlsalg pgrghwtaag rsrsrreaae aeadapvfqy vgeratradr
       61 ifvwgfsfsg algvptfvlp gsgpqprags rprrriqavp yrleldqkis saacgygftl
      121 lssktkditk vwgmglnkds qlgfhrsqkd ksrvtcvhlv vlvsergyey vlepspvplp
      181 ldrpqetrvl qvscgrahsl vltdgegvfs mgnnsygqcg rkvveneiys eshtvhrmqd
      241 fdgqvvqvac gqdhslfltd rgevyscgwg adgqtglghy nitstptklg gdlagvnvvq
      301 vatygdccla vsadgglfgw gnseylqlas vtdstqvnip rclpfsgvgl vkqaacggtg
      361 cavlngeghv fvwgygilgk gpnlletalp emipptlfgl tefnpgvqvs rircglshfa
      421 altnrgelfv wgknirgclg igrledqyfp wrvtmpgepv dvacgvdhmv tlarsfi
//
LOCUS       XP_061009352             464 aa            linear   MAM 02-DEC-2023
DEFINITION  RCC1-like G exchanging factor-like protein isoform X2 [Dama dama].
ACCESSION   XP_061009352
VERSION     XP_061009352.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153369.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..464
                     /product="RCC1-like G exchanging factor-like protein
                     isoform X2"
                     /calculated_mol_wt=49763
     Region          55..437
                     /region_name="ATS1"
                     /note="Alpha-tubulin suppressor ATS1 and related RCC1
                     domain-containing proteins [Cell cycle control, cell
                     division, chromosome partitioning, Cytoskeleton]; COG5184"
                     /db_xref="CDD:444065"
     CDS             1..464
                     /gene="RCC1L"
                     /coded_by="XM_061153369.1:20..1414"
                     /db_xref="GeneID:133063696"
ORIGIN      
        1 mgvatlatga rlgrrlsalg pgrghwtaag rsrsrreaae aeadapvfqy vgeratradr
       61 ifvwgfsfsg algvptfvlp gsgpqprags rprrriqavp yrleldqkis saacgygftl
      121 lssktkditk vwgmglnkds qlgfhrsqkd kkrgyeyvle pspvplpldr pqetrvlqvs
      181 cgrahslvlt dgegvfsmgn nsygqcgrkv veneiysesh tvhrmqdfdg qvvqvacgqd
      241 hslfltdrge vyscgwgadg qtglghynit stptklggdl agvnvvqvat ygdcclavsa
      301 dgglfgwgns eylqlasvtd stqvniprcl pfsgvglvkq aacggtgcav lngeghvfvw
      361 gygilgkgpn lletalpemi pptlfgltef npgvqvsrir cglshfaalt nrgelfvwgk
      421 nirgclgigr ledqyfpwrv tmpgepvdva cgvdhmvtla rsfi
//
LOCUS       XP_061009354             950 aa            linear   MAM 02-DEC-2023
DEFINITION  general transcription factor II-I repeat domain-containing protein
            2 isoform X1 [Dama dama].
ACCESSION   XP_061009354
VERSION     XP_061009354.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153371.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..950
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..950
                     /product="general transcription factor II-I repeat
                     domain-containing protein 2 isoform X1"
                     /calculated_mol_wt=106741
     Region          109..183
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          333..407
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          430..492
                     /region_name="DUF4371"
                     /note="Domain of unknown function (DUF4371); cl46273"
                     /db_xref="CDD:480613"
     Region          <548..625
                     /region_name="DUF4371"
                     /note="Domain of unknown function (DUF4371); cl46273"
                     /db_xref="CDD:480613"
     CDS             1..950
                     /gene="LOC133063697"
                     /coded_by="XM_061153371.1:129..2981"
                     /db_xref="GeneID:133063697"
ORIGIN      
        1 maqvamstlp taneessesr mvvtflvsal esmckelaks kaevaciamy eadvfvigte
       61 kgrafvnart dlqkdfakyc vaegpqemkp pgpanasamq vdsgeteilr kavedyfcfc
      121 ygkalgttam vpvpyekmlt dqeaivvqgl pegvpfqhpe nydlatlkwi lenkagisfl
      181 isrpfpgpan qpggpgvvtd tdrsatspse scapirvkte pmedsgisle aavvsvkkes
      241 edpnyyeygt qesrrpsagt eviemelpme dstqlvpsem sedpeaevki egntsspnit
      301 nsaagvedln ivqvtvpdne kerlssleki kqlreqvndl fsrkfgeaig vdfpvkvpyr
      361 kitfnpgcvv idgmppgvvf kapgyleiss mrrildaaef ikftvirplp glelsnvgkr
      421 kidqegrvfq ekwerayffv evqniptcli ckqsmsvske ynlrrhyqtn hskhydqyte
      481 kmrdeklqel keglrkyllg ssdivcpeqk qafakaspre naavqpvedm agnlweklre
      541 kirsfvaysi aideitdinn ttqlaifirg vdenfdvsee lldtvpmtgs ksgneiflrv
      601 ekslkkfnid wsklvsvast gtpamvdand glvtklkskv amvckgsdlk svcciihpes
      661 lcaqklkmdh imsvvvnavn wicsrglnhs efttllyeld cqygsllyyt eikwlsrglv
      721 lkrffeslee idsfmssrgk plpqlssqdw ikdlaflvdm tmhlntlnis lqghsqivtq
      781 mydlirafla klclwethla rnnlahfptl ksvsrnesdg lnyipkivel ktefqkrlsd
      841 fklyeseltl fsspfsmkie svqealqmev idlqcntvlk tkydkvgipe fykylwgsyp
      901 kykthcakil smfgstyice qlfsimklsk aeycsqlkds qwdsvlhist
//
LOCUS       XP_061009355             947 aa            linear   MAM 02-DEC-2023
DEFINITION  general transcription factor II-I repeat domain-containing protein
            2 isoform X2 [Dama dama].
ACCESSION   XP_061009355
VERSION     XP_061009355.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153372.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..947
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..947
                     /product="general transcription factor II-I repeat
                     domain-containing protein 2 isoform X2"
                     /calculated_mol_wt=106455
     Region          109..183
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          330..404
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          427..489
                     /region_name="DUF4371"
                     /note="Domain of unknown function (DUF4371); cl46273"
                     /db_xref="CDD:480613"
     Region          <545..622
                     /region_name="DUF4371"
                     /note="Domain of unknown function (DUF4371); cl46273"
                     /db_xref="CDD:480613"
     CDS             1..947
                     /gene="LOC133063697"
                     /coded_by="XM_061153372.1:129..2972"
                     /db_xref="GeneID:133063697"
ORIGIN      
        1 maqvamstlp taneessesr mvvtflvsal esmckelaks kaevaciamy eadvfvigte
       61 kgrafvnart dlqkdfakyc vaegpqemkp pgpanasamq vdsgeteilr kavedyfcfc
      121 ygkalgttam vpvpyekmlt dqeaivvqgl pegvpfqhpe nydlatlkwi lenkagisfl
      181 isrpfpgpan qpggpgvvtd tdrsatspse scapirvkte pmedsgisle aavvsvkkes
      241 edpnyyeyes rrpsagtevi emelpmedst qlvpsemsed peaevkiegn tsspnitnsa
      301 agvedlnivq vtvpdneker lsslekikql reqvndlfsr kfgeaigvdf pvkvpyrkit
      361 fnpgcvvidg mppgvvfkap gyleissmrr ildaaefikf tvirplpgle lsnvgkrkid
      421 qegrvfqekw erayffvevq niptclickq smsvskeynl rrhyqtnhsk hydqytekmr
      481 deklqelkeg lrkyllgssd ivcpeqkqaf akasprenaa vqpvedmagn lweklrekir
      541 sfvaysiaid eitdinnttq laifirgvde nfdvseelld tvpmtgsksg neiflrveks
      601 lkkfnidwsk lvsvastgtp amvdandglv tklkskvamv ckgsdlksvc ciihpeslca
      661 qklkmdhims vvvnavnwic srglnhseft tllyeldcqy gsllyyteik wlsrglvlkr
      721 ffesleeids fmssrgkplp qlssqdwikd laflvdmtmh lntlnislqg hsqivtqmyd
      781 liraflaklc lwethlarnn lahfptlksv srnesdglny ipkivelkte fqkrlsdfkl
      841 yeseltlfss pfsmkiesvq ealqmevidl qcntvlktky dkvgipefyk ylwgsypkyk
      901 thcakilsmf gstyiceqlf simklskaey csqlkdsqwd svlhist
//
LOCUS       XP_061009356             942 aa            linear   MAM 02-DEC-2023
DEFINITION  general transcription factor II-I repeat domain-containing protein
            2 isoform X3 [Dama dama].
ACCESSION   XP_061009356
VERSION     XP_061009356.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153373.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..942
                     /product="general transcription factor II-I repeat
                     domain-containing protein 2 isoform X3"
                     /calculated_mol_wt=105913
     Region          109..183
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          325..399
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          422..484
                     /region_name="DUF4371"
                     /note="Domain of unknown function (DUF4371); cl46273"
                     /db_xref="CDD:480613"
     Region          <540..617
                     /region_name="DUF4371"
                     /note="Domain of unknown function (DUF4371); cl46273"
                     /db_xref="CDD:480613"
     CDS             1..942
                     /gene="LOC133063697"
                     /coded_by="XM_061153373.1:129..2957"
                     /db_xref="GeneID:133063697"
ORIGIN      
        1 maqvamstlp taneessesr mvvtflvsal esmckelaks kaevaciamy eadvfvigte
       61 kgrafvnart dlqkdfakyc vaegpqemkp pgpanasamq vdsgeteilr kavedyfcfc
      121 ygkalgttam vpvpyekmlt dqeaivvqgl pegvpfqhpe nydlatlkwi lenkagisfl
      181 isrpfpgpan qpggpgvvtd tdrsatspse scapirvkte pmedsgisle aavvsvkkes
      241 edpnyyeygt qesrrpsagt eviemelpme emsedpeaev kiegntsspn itnsaagved
      301 lnivqvtvpd nekerlssle kikqlreqvn dlfsrkfgea igvdfpvkvp yrkitfnpgc
      361 vvidgmppgv vfkapgylei ssmrrildaa efikftvirp lpglelsnvg krkidqegrv
      421 fqekwerayf fvevqniptc lickqsmsvs keynlrrhyq tnhskhydqy tekmrdeklq
      481 elkeglrkyl lgssdivcpe qkqafakasp renaavqpve dmagnlwekl rekirsfvay
      541 siaideitdi nnttqlaifi rgvdenfdvs eelldtvpmt gsksgneifl rvekslkkfn
      601 idwsklvsva stgtpamvda ndglvtklks kvamvckgsd lksvcciihp eslcaqklkm
      661 dhimsvvvna vnwicsrgln hsefttllye ldcqygslly yteikwlsrg lvlkrffesl
      721 eeidsfmssr gkplpqlssq dwikdlaflv dmtmhlntln islqghsqiv tqmydliraf
      781 laklclweth larnnlahfp tlksvsrnes dglnyipkiv elktefqkrl sdfklyesel
      841 tlfsspfsmk iesvqealqm evidlqcntv lktkydkvgi pefykylwgs ypkykthcak
      901 ilsmfgstyi ceqlfsimkl skaeycsqlk dsqwdsvlhi st
//
LOCUS       XP_061009357             939 aa            linear   MAM 02-DEC-2023
DEFINITION  general transcription factor II-I repeat domain-containing protein
            2 isoform X4 [Dama dama].
ACCESSION   XP_061009357
VERSION     XP_061009357.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153374.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..939
                     /product="general transcription factor II-I repeat
                     domain-containing protein 2 isoform X4"
                     /calculated_mol_wt=105627
     Region          109..183
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          322..396
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          419..481
                     /region_name="DUF4371"
                     /note="Domain of unknown function (DUF4371); cl46273"
                     /db_xref="CDD:480613"
     Region          <537..614
                     /region_name="DUF4371"
                     /note="Domain of unknown function (DUF4371); cl46273"
                     /db_xref="CDD:480613"
     CDS             1..939
                     /gene="LOC133063697"
                     /coded_by="XM_061153374.1:129..2948"
                     /db_xref="GeneID:133063697"
ORIGIN      
        1 maqvamstlp taneessesr mvvtflvsal esmckelaks kaevaciamy eadvfvigte
       61 kgrafvnart dlqkdfakyc vaegpqemkp pgpanasamq vdsgeteilr kavedyfcfc
      121 ygkalgttam vpvpyekmlt dqeaivvqgl pegvpfqhpe nydlatlkwi lenkagisfl
      181 isrpfpgpan qpggpgvvtd tdrsatspse scapirvkte pmedsgisle aavvsvkkes
      241 edpnyyeyes rrpsagtevi emelpmeems edpeaevkie gntsspnitn saagvedlni
      301 vqvtvpdnek erlsslekik qlreqvndlf srkfgeaigv dfpvkvpyrk itfnpgcvvi
      361 dgmppgvvfk apgyleissm rrildaaefi kftvirplpg lelsnvgkrk idqegrvfqe
      421 kwerayffve vqniptclic kqsmsvskey nlrrhyqtnh skhydqytek mrdeklqelk
      481 eglrkyllgs sdivcpeqkq afakaspren aavqpvedma gnlweklrek irsfvaysia
      541 ideitdinnt tqlaifirgv denfdvseel ldtvpmtgsk sgneiflrve kslkkfnidw
      601 sklvsvastg tpamvdandg lvtklkskva mvckgsdlks vcciihpesl caqklkmdhi
      661 msvvvnavnw icsrglnhse fttllyeldc qygsllyyte ikwlsrglvl krffesleei
      721 dsfmssrgkp lpqlssqdwi kdlaflvdmt mhlntlnisl qghsqivtqm ydliraflak
      781 lclwethlar nnlahfptlk svsrnesdgl nyipkivelk tefqkrlsdf klyeseltlf
      841 sspfsmkies vqealqmevi dlqcntvlkt kydkvgipef ykylwgsypk ykthcakils
      901 mfgstyiceq lfsimklska eycsqlkdsq wdsvlhist
//
LOCUS       XP_061009359             929 aa            linear   MAM 02-DEC-2023
DEFINITION  general transcription factor II-I repeat domain-containing protein
            2 isoform X5 [Dama dama].
ACCESSION   XP_061009359
VERSION     XP_061009359.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153376.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..929
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..929
                     /product="general transcription factor II-I repeat
                     domain-containing protein 2 isoform X5"
                     /calculated_mol_wt=104425
     Region          109..183
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          312..386
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          409..471
                     /region_name="DUF4371"
                     /note="Domain of unknown function (DUF4371); cl46273"
                     /db_xref="CDD:480613"
     Region          <527..604
                     /region_name="DUF4371"
                     /note="Domain of unknown function (DUF4371); cl46273"
                     /db_xref="CDD:480613"
     CDS             1..929
                     /gene="LOC133063697"
                     /coded_by="XM_061153376.1:129..2918"
                     /db_xref="GeneID:133063697"
ORIGIN      
        1 maqvamstlp taneessesr mvvtflvsal esmckelaks kaevaciamy eadvfvigte
       61 kgrafvnart dlqkdfakyc vaegpqemkp pgpanasamq vdsgeteilr kavedyfcfc
      121 ygkalgttam vpvpyekmlt dqeaivvqgl pegvpfqhpe nydlatlkwi lenkagisfl
      181 isrpfpgpan qpggpgvvtd tdrsatspse scapirvkte pmedsgisle aavvsvkkes
      241 edpnyyeygt qesrrpsagt eviemelpme gntsspnitn saagvedlni vqvtvpdnek
      301 erlsslekik qlreqvndlf srkfgeaigv dfpvkvpyrk itfnpgcvvi dgmppgvvfk
      361 apgyleissm rrildaaefi kftvirplpg lelsnvgkrk idqegrvfqe kwerayffve
      421 vqniptclic kqsmsvskey nlrrhyqtnh skhydqytek mrdeklqelk eglrkyllgs
      481 sdivcpeqkq afakaspren aavqpvedma gnlweklrek irsfvaysia ideitdinnt
      541 tqlaifirgv denfdvseel ldtvpmtgsk sgneiflrve kslkkfnidw sklvsvastg
      601 tpamvdandg lvtklkskva mvckgsdlks vcciihpesl caqklkmdhi msvvvnavnw
      661 icsrglnhse fttllyeldc qygsllyyte ikwlsrglvl krffesleei dsfmssrgkp
      721 lpqlssqdwi kdlaflvdmt mhlntlnisl qghsqivtqm ydliraflak lclwethlar
      781 nnlahfptlk svsrnesdgl nyipkivelk tefqkrlsdf klyeseltlf sspfsmkies
      841 vqealqmevi dlqcntvlkt kydkvgipef ykylwgsypk ykthcakils mfgstyiceq
      901 lfsimklska eycsqlkdsq wdsvlhist
//
LOCUS       XP_061009360             470 aa            linear   MAM 02-DEC-2023
DEFINITION  general transcription factor II-I repeat domain-containing protein
            2 isoform X6 [Dama dama].
ACCESSION   XP_061009360
VERSION     XP_061009360.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153377.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..470
                     /product="general transcription factor II-I repeat
                     domain-containing protein 2 isoform X6"
                     /calculated_mol_wt=51016
     Region          109..183
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          333..407
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     CDS             1..470
                     /gene="LOC133063697"
                     /coded_by="XM_061153377.1:414..1826"
                     /db_xref="GeneID:133063697"
ORIGIN      
        1 maqvamstlp taneessesr mvvtflvsal esmckelaks kaevaciamy eadvfvigte
       61 kgrafvnart dlqkdfakyc vaegpqemkp pgpanasamq vdsgeteilr kavedyfcfc
      121 ygkalgttam vpvpyekmlt dqeaivvqgl pegvpfqhpe nydlatlkwi lenkagisfl
      181 isrpfpgpan qpggpgvvtd tdrsatspse scapirvkte pmedsgisle aavvsvkkes
      241 edpnyyeygt qesrrpsagt eviemelpme dstqlvpsem sedpeaevki egntsspnit
      301 nsaagvedln ivqvtvpdne kerlssleki kqlreqvndl fsrkfgeaig vdfpvkvpyr
      361 kitfnpgcvv idgmppgvvf kapgyleiss mrrildaaef ikftvirplp glelsnapwt
      421 aarqaspsvt nsrsllrtpv hqvgdaiqps hplsspfppa fnlsqheglf
//
LOCUS       XP_061009361             441 aa            linear   MAM 02-DEC-2023
DEFINITION  general transcription factor II-I repeat domain-containing protein
            2 isoform X7 [Dama dama].
ACCESSION   XP_061009361
VERSION     XP_061009361.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153378.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..441
                     /product="general transcription factor II-I repeat
                     domain-containing protein 2 isoform X7"
                     /calculated_mol_wt=47642
     Region          109..183
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          333..407
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     CDS             1..441
                     /gene="LOC133063697"
                     /coded_by="XM_061153378.1:148..1473"
                     /db_xref="GeneID:133063697"
ORIGIN      
        1 maqvamstlp taneessesr mvvtflvsal esmckelaks kaevaciamy eadvfvigte
       61 kgrafvnart dlqkdfakyc vaegpqemkp pgpanasamq vdsgeteilr kavedyfcfc
      121 ygkalgttam vpvpyekmlt dqeaivvqgl pegvpfqhpe nydlatlkwi lenkagisfl
      181 isrpfpgpan qpggpgvvtd tdrsatspse scapirvkte pmedsgisle aavvsvkkes
      241 edpnyyeygt qesrrpsagt eviemelpme dstqlvpsem sedpeaevki egntsspnit
      301 nsaagvedln ivqvtvpdne kerlssleki kqlreqvndl fsrkfgeaig vdfpvkvpyr
      361 kitfnpgcvv idgmppgvvf kapgyleiss mrrildaaef ikftvirplp glelsneaaa
      421 evgavtarrg dgasdmgsrv p
//
LOCUS       XP_061009362             437 aa            linear   MAM 02-DEC-2023
DEFINITION  general transcription factor II-I repeat domain-containing protein
            2 isoform X8 [Dama dama].
ACCESSION   XP_061009362
VERSION     XP_061009362.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153379.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..437
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..437
                     /product="general transcription factor II-I repeat
                     domain-containing protein 2 isoform X8"
                     /calculated_mol_wt=47807
     Region          109..183
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          333..407
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     CDS             1..437
                     /gene="LOC133063697"
                     /coded_by="XM_061153379.1:143..1456"
                     /db_xref="GeneID:133063697"
ORIGIN      
        1 maqvamstlp taneessesr mvvtflvsal esmckelaks kaevaciamy eadvfvigte
       61 kgrafvnart dlqkdfakyc vaegpqemkp pgpanasamq vdsgeteilr kavedyfcfc
      121 ygkalgttam vpvpyekmlt dqeaivvqgl pegvpfqhpe nydlatlkwi lenkagisfl
      181 isrpfpgpan qpggpgvvtd tdrsatspse scapirvkte pmedsgisle aavvsvkkes
      241 edpnyyeygt qesrrpsagt eviemelpme dstqlvpsem sedpeaevki egntsspnit
      301 nsaagvedln ivqvtvpdne kerlssleki kqlreqvndl fsrkfgeaig vdfpvkvpyr
      361 kitfnpgcvv idgmppgvvf kapgyleiss mrrildaaef ikftvirplp glelsnvrrk
      421 vnsflspcly qkwekgr
//
LOCUS       XP_061009363             433 aa            linear   MAM 02-DEC-2023
DEFINITION  general transcription factor II-I repeat domain-containing protein
            2 isoform X9 [Dama dama].
ACCESSION   XP_061009363
VERSION     XP_061009363.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153380.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..433
                     /product="general transcription factor II-I repeat
                     domain-containing protein 2 isoform X9"
                     /calculated_mol_wt=47022
     Region          109..183
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          333..407
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     CDS             1..433
                     /gene="LOC133063697"
                     /coded_by="XM_061153380.1:136..1437"
                     /db_xref="GeneID:133063697"
ORIGIN      
        1 maqvamstlp taneessesr mvvtflvsal esmckelaks kaevaciamy eadvfvigte
       61 kgrafvnart dlqkdfakyc vaegpqemkp pgpanasamq vdsgeteilr kavedyfcfc
      121 ygkalgttam vpvpyekmlt dqeaivvqgl pegvpfqhpe nydlatlkwi lenkagisfl
      181 isrpfpgpan qpggpgvvtd tdrsatspse scapirvkte pmedsgisle aavvsvkkes
      241 edpnyyeygt qesrrpsagt eviemelpme dstqlvpsem sedpeaevki egntsspnit
      301 nsaagvedln ivqvtvpdne kerlssleki kqlreqvndl fsrkfgeaig vdfpvkvpyr
      361 kitfnpgcvv idgmppgvvf kapgyleiss mrrildaaef ikftvirplp glelsnggtn
      421 iatyrpspkt sfi
//
LOCUS       XP_061009365             392 aa            linear   MAM 02-DEC-2023
DEFINITION  neutrophil cytosol factor 1 isoform X1 [Dama dama].
ACCESSION   XP_061009365
VERSION     XP_061009365.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153382.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..392
                     /product="neutrophil cytosol factor 1 isoform X1"
                     /calculated_mol_wt=45024
     Region          6..123
                     /region_name="PX_p47phox"
                     /note="The phosphoinositide binding Phox Homology domain
                     of the p47phox subunit of NADPH oxidase; cd06887"
                     /db_xref="CDD:132797"
     Site            order(43..45,77..78,90)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132797"
     Site            order(51,55,70,74..75)
                     /site_type="other"
                     /note="anionic phospholipid binding site [chemical
                     binding]"
                     /db_xref="CDD:132797"
     Region          160..212
                     /region_name="SH3_p47phox_1"
                     /note="First or N-terminal Src homology 3 domain of the
                     p47phox subunit of NADPH oxidase, also called Neutrophil
                     Cytosolic Factor 1; cd12021"
                     /db_xref="CDD:212954"
     Site            order(165,167,173..174,191..193,204,206,208..209)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212954"
     Region          230..282
                     /region_name="SH3_p47phox_2"
                     /note="Second or C-terminal Src homology 3 domain of the
                     p47phox subunit of NADPH oxidase, also called Neutrophil
                     Cytosolic Factor 1; cd12022"
                     /db_xref="CDD:212955"
     Site            order(241,243..244,261..263,274,276,278..279)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212955"
     Region          282..331
                     /region_name="NECFESHC"
                     /note="SH3 terminal domain of 2nd SH3 on Neutrophil
                     cytosol factor 1; pfam16621"
                     /db_xref="CDD:465204"
     Region          361..392
                     /region_name="p47_phox_C"
                     /note="NADPH oxidase subunit p47Phox, C terminal domain;
                     pfam08944"
                     /db_xref="CDD:430336"
     CDS             1..392
                     /gene="NCF1"
                     /coded_by="XM_061153382.1:86..1264"
                     /db_xref="GeneID:133063698"
ORIGIN      
        1 mgdhfirhia llgfekrfvp sqhyvymflv kwqdlsekvv yrrfteiyef hkglkemfpi
       61 eagdinpekr iiphlpaprw fdgqraaesr qgtlteycsv lmslpvkisr cphfldffrv
      121 rpddlklptd sqvkkpetyl ipkdgksnta ditgpiilqt yraiadyekg sssqmalatg
      181 dvvdvvekne sgwwfcqmkt krgwvpasyl epldspdeae dpepnyegep yvtikaytav
      241 ledemsleeg etievihkll dgwwvvrked vtgyfpsmfl qkagqdvaqa rsqiksrgap
      301 prrssirnah sihqrsrkrl sqdtyrrnsv rftqqrrrqr pgpqspgsvl keqqqpeter
      361 pkpqpavppr psadlilhrc sestkrklas av
//
LOCUS       XP_061009366             336 aa            linear   MAM 02-DEC-2023
DEFINITION  neutrophil cytosol factor 1 isoform X2 [Dama dama].
ACCESSION   XP_061009366
VERSION     XP_061009366.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153383.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..336
                     /product="neutrophil cytosol factor 1 isoform X2"
                     /calculated_mol_wt=38078
     Region          <1..67
                     /region_name="PX_domain"
                     /note="The Phox Homology domain, a phosphoinositide
                     binding module; cl02563"
                     /db_xref="CDD:470617"
     Region          104..156
                     /region_name="SH3_p47phox_1"
                     /note="First or N-terminal Src homology 3 domain of the
                     p47phox subunit of NADPH oxidase, also called Neutrophil
                     Cytosolic Factor 1; cd12021"
                     /db_xref="CDD:212954"
     Site            order(109,111,117..118,135..137,148,150,152..153)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212954"
     Region          174..226
                     /region_name="SH3_p47phox_2"
                     /note="Second or C-terminal Src homology 3 domain of the
                     p47phox subunit of NADPH oxidase, also called Neutrophil
                     Cytosolic Factor 1; cd12022"
                     /db_xref="CDD:212955"
     Site            order(185,187..188,205..207,218,220,222..223)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212955"
     Region          226..275
                     /region_name="NECFESHC"
                     /note="SH3 terminal domain of 2nd SH3 on Neutrophil
                     cytosol factor 1; pfam16621"
                     /db_xref="CDD:465204"
     Region          305..336
                     /region_name="p47_phox_C"
                     /note="NADPH oxidase subunit p47Phox, C terminal domain;
                     pfam08944"
                     /db_xref="CDD:430336"
     CDS             1..336
                     /gene="NCF1"
                     /coded_by="XM_061153383.1:109..1119"
                     /db_xref="GeneID:133063698"
ORIGIN      
        1 mfpieagdin pekriiphlp aprwfdgqra aesrqgtlte ycsvlmslpv kisrcphfld
       61 ffrvrpddlk lptdsqvkkp etylipkdgk sntaditgpi ilqtyraiad yekgsssqma
      121 latgdvvdvv eknesgwwfc qmktkrgwvp asylepldsp deaedpepny egepyvtika
      181 ytavledems leegetievi hklldgwwvv rkedvtgyfp smflqkagqd vaqarsqiks
      241 rgapprrssi rnahsihqrs rkrlsqdtyr rnsvrftqqr rrqrpgpqsp gsvlkeqqqp
      301 eterpkpqpa vpprpsadli lhrcsestkr klasav
//
LOCUS       XP_061009367             998 aa            linear   MAM 02-DEC-2023
DEFINITION  general transcription factor II-I isoform X1 [Dama dama].
ACCESSION   XP_061009367
VERSION     XP_061009367.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153384.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..998
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..998
                     /product="general transcription factor II-I isoform X1"
                     /calculated_mol_wt=112305
     Region          112..186
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          360..434
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          465..539
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          570..644
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          732..796
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          868..942
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     CDS             1..998
                     /gene="GTF2I"
                     /coded_by="XM_061153384.1:6..3002"
                     /db_xref="GeneID:133063699"
ORIGIN      
        1 maqvavstlp vedeessesr mvvtflmsal esmckelaks kaevaciavy etdvfvvgte
       61 rgrafvntrk dfqkdfvkyc veeeekaaem hkmksttqan rmsvdaveie tlrktvedyf
      121 cfcygkalgk stvvpvpyek mlrdqsavvv qglpegvafk hpenydlatl kwilenkagi
      181 sfiikrpfle pkkhlggrvm vtdaersmls psgscgpvkv kteptedsgi slemaavtvk
      241 eesedpdyyq yniqgpsetd dvddklplsk slqgshhsse gnegtemevp aedstqhvps
      301 etsedpevev tiedddyppp akrpkssepp qppvtepana gkrkvrefnf ekwnaritdl
      361 rkqveelfer kyaqaikakg pvtipyplfq shvedlyveg lpegipfrrp stygiprler
      421 illakerirf vikkhellns tredlqldkp asgvkeewya ritklrkmvd qlfckkfaea
      481 lgsteakavp yqkfeahpnd lyveglpeni pfrspswygi prlekiiqvg nrikfvikrp
      541 ellthsttev tqprtntpvk edwnvritkl rkqveeifnl kfaqalglte avkvpypvfe
      601 snpeflyveg lpegipfrsp twfgiprler ivrgsnkikf vvkkpelvis ylppgmaski
      661 ntkalqspkr prspgsnskv peievtvegp nsnnpqtsav rtptqtngsn vpfkprgref
      721 sfeawnakit dlkqkvenlf nekcgealgl kqavkvpfal fesfpedfyv eglpegvpfr
      781 rpstfgiprl ekilrnkaki kfiikkpemf etaikestss skspprkins spnvnttasg
      841 vedlniiqvt ipdddnerls kvekarqlre qvndlfsrkf geaigmgfpv kvpyrkitin
      901 pgcvvvdgmp pgvsfkapsy leissmrril dsaefikftv irpfpglvin nqlvdqnese
      961 gpviqesaep tqlevpatee iketdgnsqi kqepdptw
//
LOCUS       XP_061009368             979 aa            linear   MAM 02-DEC-2023
DEFINITION  general transcription factor II-I isoform X2 [Dama dama].
ACCESSION   XP_061009368
VERSION     XP_061009368.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153385.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..979
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..979
                     /product="general transcription factor II-I isoform X2"
                     /calculated_mol_wt=110279
     Region          112..186
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          341..415
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          446..520
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          551..625
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          713..777
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          849..923
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     CDS             1..979
                     /gene="GTF2I"
                     /coded_by="XM_061153385.1:6..2945"
                     /db_xref="GeneID:133063699"
ORIGIN      
        1 maqvavstlp vedeessesr mvvtflmsal esmckelaks kaevaciavy etdvfvvgte
       61 rgrafvntrk dfqkdfvkyc veeeekaaem hkmksttqan rmsvdaveie tlrktvedyf
      121 cfcygkalgk stvvpvpyek mlrdqsavvv qglpegvafk hpenydlatl kwilenkagi
      181 sfiikrpfle pkkhlggrvm vtdaersmls psgscgpvkv kteptedsgi slemaavtvk
      241 eesedpdyyq yniqgshhss egnegtemev paedstqhvp setsedpeve vtiedddypp
      301 pakrpkssep pqppvtepan agkrkvrefn fekwnaritd lrkqveelfe rkyaqaikak
      361 gpvtipyplf qshvedlyve glpegipfrr pstygiprle rillakerir fvikkhelln
      421 stredlqldk pasgvkeewy aritklrkmv dqlfckkfae algsteakav pyqkfeahpn
      481 dlyveglpen ipfrspswyg iprlekiiqv gnrikfvikr pellthstte vtqprtntpv
      541 kedwnvritk lrkqveeifn lkfaqalglt eavkvpypvf esnpeflyve glpegipfrs
      601 ptwfgiprle rivrgsnkik fvvkkpelvi sylppgmask intkalqspk rprspgsnsk
      661 vpeievtveg pnsnnpqtsa vrtptqtngs nvpfkprgre fsfeawnaki tdlkqkvenl
      721 fnekcgealg lkqavkvpfa lfesfpedfy veglpegvpf rrpstfgipr lekilrnkak
      781 ikfiikkpem fetaikests sskspprkin sspnvnttas gvedlniiqv tipdddnerl
      841 skvekarqlr eqvndlfsrk fgeaigmgfp vkvpyrkiti npgcvvvdgm ppgvsfkaps
      901 yleissmrri ldsaefikft virpfpglvi nnqlvdqnes egpviqesae ptqlevpate
      961 eiketdgnsq ikqepdptw
//
LOCUS       XP_061009369             978 aa            linear   MAM 02-DEC-2023
DEFINITION  general transcription factor II-I isoform X3 [Dama dama].
ACCESSION   XP_061009369
VERSION     XP_061009369.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153386.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..978
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..978
                     /product="general transcription factor II-I isoform X3"
                     /calculated_mol_wt=110065
     Region          112..186
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          340..414
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          445..519
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          550..624
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          712..776
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          848..922
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     CDS             1..978
                     /gene="GTF2I"
                     /coded_by="XM_061153386.1:6..2942"
                     /db_xref="GeneID:133063699"
ORIGIN      
        1 maqvavstlp vedeessesr mvvtflmsal esmckelaks kaevaciavy etdvfvvgte
       61 rgrafvntrk dfqkdfvkyc veeeekaaem hkmksttqan rmsvdaveie tlrktvedyf
      121 cfcygkalgk stvvpvpyek mlrdqsavvv qglpegvafk hpenydlatl kwilenkagi
      181 sfiikrpfle pkkhlggrvm vtdaersmls psgscgpvkv kteptedsgi slemaavtvk
      241 eesedpdyyq yniqagpset ddvddklpls kslqgshhss egnegtemev paedddyppp
      301 akrpkssepp qppvtepana gkrkvrefnf ekwnaritdl rkqveelfer kyaqaikakg
      361 pvtipyplfq shvedlyveg lpegipfrrp stygiprler illakerirf vikkhellns
      421 tredlqldkp asgvkeewya ritklrkmvd qlfckkfaea lgsteakavp yqkfeahpnd
      481 lyveglpeni pfrspswygi prlekiiqvg nrikfvikrp ellthsttev tqprtntpvk
      541 edwnvritkl rkqveeifnl kfaqalglte avkvpypvfe snpeflyveg lpegipfrsp
      601 twfgiprler ivrgsnkikf vvkkpelvis ylppgmaski ntkalqspkr prspgsnskv
      661 peievtvegp nsnnpqtsav rtptqtngsn vpfkprgref sfeawnakit dlkqkvenlf
      721 nekcgealgl kqavkvpfal fesfpedfyv eglpegvpfr rpstfgiprl ekilrnkaki
      781 kfiikkpemf etaikestss skspprkins spnvnttasg vedlniiqvt ipdddnerls
      841 kvekarqlre qvndlfsrkf geaigmgfpv kvpyrkitin pgcvvvdgmp pgvsfkapsy
      901 leissmrril dsaefikftv irpfpglvin nqlvdqnese gpviqesaep tqlevpatee
      961 iketdgnsqi kqepdptw
//
LOCUS       XP_061009370             977 aa            linear   MAM 02-DEC-2023
DEFINITION  general transcription factor II-I isoform X4 [Dama dama].
ACCESSION   XP_061009370
VERSION     XP_061009370.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153387.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..977
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..977
                     /product="general transcription factor II-I isoform X4"
                     /calculated_mol_wt=109994
     Region          112..186
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          339..413
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          444..518
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          549..623
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          711..775
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          847..921
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     CDS             1..977
                     /gene="GTF2I"
                     /coded_by="XM_061153387.1:6..2939"
                     /db_xref="GeneID:133063699"
ORIGIN      
        1 maqvavstlp vedeessesr mvvtflmsal esmckelaks kaevaciavy etdvfvvgte
       61 rgrafvntrk dfqkdfvkyc veeeekaaem hkmksttqan rmsvdaveie tlrktvedyf
      121 cfcygkalgk stvvpvpyek mlrdqsavvv qglpegvafk hpenydlatl kwilenkagi
      181 sfiikrpfle pkkhlggrvm vtdaersmls psgscgpvkv kteptedsgi slemaavtvk
      241 eesedpdyyq yniqgpsetd dvddklplsk slqgshhsse gnegtemevp aedddypppa
      301 krpksseppq ppvtepanag krkvrefnfe kwnaritdlr kqveelferk yaqaikakgp
      361 vtipyplfqs hvedlyvegl pegipfrrps tygiprleri llakerirfv ikkhellnst
      421 redlqldkpa sgvkeewyar itklrkmvdq lfckkfaeal gsteakavpy qkfeahpndl
      481 yveglpenip frspswygip rlekiiqvgn rikfvikrpe llthsttevt qprtntpvke
      541 dwnvritklr kqveeifnlk faqalgltea vkvpypvfes npeflyvegl pegipfrspt
      601 wfgiprleri vrgsnkikfv vkkpelvisy lppgmaskin tkalqspkrp rspgsnskvp
      661 eievtvegpn snnpqtsavr tptqtngsnv pfkprgrefs feawnakitd lkqkvenlfn
      721 ekcgealglk qavkvpfalf esfpedfyve glpegvpfrr pstfgiprle kilrnkakik
      781 fiikkpemfe taikestsss kspprkinss pnvnttasgv edlniiqvti pdddnerlsk
      841 vekarqlreq vndlfsrkfg eaigmgfpvk vpyrkitinp gcvvvdgmpp gvsfkapsyl
      901 eissmrrild saefikftvi rpfpglvinn qlvdqneseg pviqesaept qlevpateei
      961 ketdgnsqik qepdptw
//
LOCUS       XP_061009371             958 aa            linear   MAM 02-DEC-2023
DEFINITION  general transcription factor II-I isoform X5 [Dama dama].
ACCESSION   XP_061009371
VERSION     XP_061009371.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153388.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..958
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..958
                     /product="general transcription factor II-I isoform X5"
                     /calculated_mol_wt=107968
     Region          112..186
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          320..394
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          425..499
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          530..604
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          692..756
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          828..902
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     CDS             1..958
                     /gene="GTF2I"
                     /coded_by="XM_061153388.1:6..2882"
                     /db_xref="GeneID:133063699"
ORIGIN      
        1 maqvavstlp vedeessesr mvvtflmsal esmckelaks kaevaciavy etdvfvvgte
       61 rgrafvntrk dfqkdfvkyc veeeekaaem hkmksttqan rmsvdaveie tlrktvedyf
      121 cfcygkalgk stvvpvpyek mlrdqsavvv qglpegvafk hpenydlatl kwilenkagi
      181 sfiikrpfle pkkhlggrvm vtdaersmls psgscgpvkv kteptedsgi slemaavtvk
      241 eesedpdyyq yniqgshhss egnegtemev paedddyppp akrpkssepp qppvtepana
      301 gkrkvrefnf ekwnaritdl rkqveelfer kyaqaikakg pvtipyplfq shvedlyveg
      361 lpegipfrrp stygiprler illakerirf vikkhellns tredlqldkp asgvkeewya
      421 ritklrkmvd qlfckkfaea lgsteakavp yqkfeahpnd lyveglpeni pfrspswygi
      481 prlekiiqvg nrikfvikrp ellthsttev tqprtntpvk edwnvritkl rkqveeifnl
      541 kfaqalglte avkvpypvfe snpeflyveg lpegipfrsp twfgiprler ivrgsnkikf
      601 vvkkpelvis ylppgmaski ntkalqspkr prspgsnskv peievtvegp nsnnpqtsav
      661 rtptqtngsn vpfkprgref sfeawnakit dlkqkvenlf nekcgealgl kqavkvpfal
      721 fesfpedfyv eglpegvpfr rpstfgiprl ekilrnkaki kfiikkpemf etaikestss
      781 skspprkins spnvnttasg vedlniiqvt ipdddnerls kvekarqlre qvndlfsrkf
      841 geaigmgfpv kvpyrkitin pgcvvvdgmp pgvsfkapsy leissmrril dsaefikftv
      901 irpfpglvin nqlvdqnese gpviqesaep tqlevpatee iketdgnsqi kqepdptw
//
LOCUS       XP_061009372             999 aa            linear   MAM 02-DEC-2023
DEFINITION  general transcription factor II-I isoform X6 [Dama dama].
ACCESSION   XP_061009372
VERSION     XP_061009372.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153389.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..999
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..999
                     /product="general transcription factor II-I isoform X6"
                     /calculated_mol_wt=112376
     Region          112..186
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          361..435
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          466..540
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          571..645
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          733..797
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          869..943
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     CDS             1..999
                     /gene="GTF2I"
                     /coded_by="XM_061153389.1:374..3373"
                     /db_xref="GeneID:133063699"
ORIGIN      
        1 maqvavstlp vedeessesr mvvtflmsal esmckelaks kaevaciavy etdvfvvgte
       61 rgrafvntrk dfqkdfvkyc veeeekaaem hkmksttqan rmsvdaveie tlrktvedyf
      121 cfcygkalgk stvvpvpyek mlrdqsavvv qglpegvafk hpenydlatl kwilenkagi
      181 sfiikrpfle pkkhlggrvm vtdaersmls psgscgpvkv kteptedsgi slemaavtvk
      241 eesedpdyyq yniqagpset ddvddklpls kslqgshhss egnegtemev paedstqhvp
      301 setsedpeve vtiedddypp pakrpkssep pqppvtepan agkrkvrefn fekwnaritd
      361 lrkqveelfe rkyaqaikak gpvtipyplf qshvedlyve glpegipfrr pstygiprle
      421 rillakerir fvikkhelln stredlqldk pasgvkeewy aritklrkmv dqlfckkfae
      481 algsteakav pyqkfeahpn dlyveglpen ipfrspswyg iprlekiiqv gnrikfvikr
      541 pellthstte vtqprtntpv kedwnvritk lrkqveeifn lkfaqalglt eavkvpypvf
      601 esnpeflyve glpegipfrs ptwfgiprle rivrgsnkik fvvkkpelvi sylppgmask
      661 intkalqspk rprspgsnsk vpeievtveg pnsnnpqtsa vrtptqtngs nvpfkprgre
      721 fsfeawnaki tdlkqkvenl fnekcgealg lkqavkvpfa lfesfpedfy veglpegvpf
      781 rrpstfgipr lekilrnkak ikfiikkpem fetaikests sskspprkin sspnvnttas
      841 gvedlniiqv tipdddnerl skvekarqlr eqvndlfsrk fgeaigmgfp vkvpyrkiti
      901 npgcvvvdgm ppgvsfkaps yleissmrri ldsaefikft virpfpglvi nnqlvdqnes
      961 egpviqesae ptqlevpate eiketdgnsq ikqepdptw
//
LOCUS       XP_061009374             944 aa            linear   MAM 02-DEC-2023
DEFINITION  general transcription factor II-I repeat domain-containing protein
            1 isoform X1 [Dama dama].
ACCESSION   XP_061009374
VERSION     XP_061009374.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153391.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..944
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..944
                     /product="general transcription factor II-I repeat
                     domain-containing protein 1 isoform X1"
                     /calculated_mol_wt=104162
     Region          128..202
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          351..425
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          565..639
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          690..764
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          787..859
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     CDS             1..944
                     /gene="GTF2IRD1"
                     /coded_by="XM_061153391.1:166..3000"
                     /db_xref="GeneID:133063700"
ORIGIN      
        1 mallgkrcdi pangcgpdrw tsafarkdei itslvsalds mcsalsklna evacvavhde
       61 safvvgtekg rmflnarkel qsdflrfcrg pplkepeaeh pkkvprgegg srniprsale
      121 hgsdvyllrk mveevfdvly sealgrasvv plpyerllre pgllavqglp eglafrrpae
      181 ydpkalmail ehshrirfkl krpledggrd skalvelngv sllakgardc glhsqtpkgp
      241 pqdlpptaps ssvasflyst alpnhtvrel kqeapacplg psdlglgrpg pepkapaaqd
      301 fpdccgqkpt gpggpliqnv haskrilfsi vhdksekwda fiketedint lrecvqilfn
      361 sryaealgld hmvpvpyrki acdpeaveiv gipdkipfkr pctygvpklk rileerhsih
      421 fvikrmfder iftgnkftkd ptklepaspp edastevara avldlagtar sdksglsedc
      481 gpgtsgelsg lrpikieped pdiiqvtvpd pspaseemtd smpghlpsed sgygmemltd
      541 kgpsedprpe erpvedshgd virplrkqve llfntryaka igisepvkvp yskflmypee
      601 lfvvglpegi slrrpncfgi aklrkileas nsiqfvikrp elltegvkep ladsqerdsg
      661 dplvdeslkr qgfqenydar lsridiantl reqvqdlfnk kygealgiky pvqvpykrik
      721 snpgsviieg lppgipfrkp ctfgsqnler ilavadkikf tvtrpfqgli pkpdeddanr
      781 lgekvilreq vkelfnekyg ealglnrpvl vpyklirdsp davevtglpd dipfrnpnty
      841 dihrlekilk arehvrmvii nqlqpfaeic sdakvpakds sipkrkrkrv segnsvssss
      901 ssssssssnp esvastnqis lvqwpmymvd yaglnvqlpg plny
//
LOCUS       XP_061009375             944 aa            linear   MAM 02-DEC-2023
DEFINITION  general transcription factor II-I repeat domain-containing protein
            1 isoform X1 [Dama dama].
ACCESSION   XP_061009375
VERSION     XP_061009375.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153392.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..944
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..944
                     /product="general transcription factor II-I repeat
                     domain-containing protein 1 isoform X1"
                     /calculated_mol_wt=104162
     Region          128..202
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          351..425
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          565..639
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          690..764
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          787..859
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     CDS             1..944
                     /gene="GTF2IRD1"
                     /coded_by="XM_061153392.1:114..2948"
                     /db_xref="GeneID:133063700"
ORIGIN      
        1 mallgkrcdi pangcgpdrw tsafarkdei itslvsalds mcsalsklna evacvavhde
       61 safvvgtekg rmflnarkel qsdflrfcrg pplkepeaeh pkkvprgegg srniprsale
      121 hgsdvyllrk mveevfdvly sealgrasvv plpyerllre pgllavqglp eglafrrpae
      181 ydpkalmail ehshrirfkl krpledggrd skalvelngv sllakgardc glhsqtpkgp
      241 pqdlpptaps ssvasflyst alpnhtvrel kqeapacplg psdlglgrpg pepkapaaqd
      301 fpdccgqkpt gpggpliqnv haskrilfsi vhdksekwda fiketedint lrecvqilfn
      361 sryaealgld hmvpvpyrki acdpeaveiv gipdkipfkr pctygvpklk rileerhsih
      421 fvikrmfder iftgnkftkd ptklepaspp edastevara avldlagtar sdksglsedc
      481 gpgtsgelsg lrpikieped pdiiqvtvpd pspaseemtd smpghlpsed sgygmemltd
      541 kgpsedprpe erpvedshgd virplrkqve llfntryaka igisepvkvp yskflmypee
      601 lfvvglpegi slrrpncfgi aklrkileas nsiqfvikrp elltegvkep ladsqerdsg
      661 dplvdeslkr qgfqenydar lsridiantl reqvqdlfnk kygealgiky pvqvpykrik
      721 snpgsviieg lppgipfrkp ctfgsqnler ilavadkikf tvtrpfqgli pkpdeddanr
      781 lgekvilreq vkelfnekyg ealglnrpvl vpyklirdsp davevtglpd dipfrnpnty
      841 dihrlekilk arehvrmvii nqlqpfaeic sdakvpakds sipkrkrkrv segnsvssss
      901 ssssssssnp esvastnqis lvqwpmymvd yaglnvqlpg plny
//
LOCUS       XP_061009376             932 aa            linear   MAM 02-DEC-2023
DEFINITION  general transcription factor II-I repeat domain-containing protein
            1 isoform X2 [Dama dama].
ACCESSION   XP_061009376
VERSION     XP_061009376.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153393.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..932
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..932
                     /product="general transcription factor II-I repeat
                     domain-containing protein 1 isoform X2"
                     /calculated_mol_wt=102304
     Region          128..202
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          351..425
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          440..>650
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          678..752
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          775..847
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     CDS             1..932
                     /gene="GTF2IRD1"
                     /coded_by="XM_061153393.1:168..2966"
                     /db_xref="GeneID:133063700"
ORIGIN      
        1 mallgkrcdi pangcgpdrw tsafarkdei itslvsalds mcsalsklna evacvavhde
       61 safvvgtekg rmflnarkel qsdflrfcrg pplkepeaeh pkkvprgegg srniprsale
      121 hgsdvyllrk mveevfdvly sealgrasvv plpyerllre pgllavqglp eglafrrpae
      181 ydpkalmail ehshrirfkl krpledggrd skalvelngv sllakgardc glhsqtpkgp
      241 pqdlpptaps ssvasflyst alpnhtvrel kqeapacplg psdlglgrpg pepkapaaqd
      301 fpdccgqkpt gpggpliqnv haskrilfsi vhdksekwda fiketedint lrecvqilfn
      361 sryaealgld hmvpvpyrki acdpeaveiv gipdkipfkr pctygvpklk rileerhsih
      421 fvikrmfder iftgnkftkd ptklepaspp edastevara avldlagtar sdksglsedc
      481 gpgtsgelsg lrpikieped pdiiqvtvpd pspaseemtd smpghlpsed sgygmemltd
      541 kgpsedprpe erpvedshgd virplrkqve llfntrygpt algspssgrs wkpatassls
      601 srglscsrke skspsrtakm pplswvpgat rspwllsppp tpperdsgdp lvdeslkrqg
      661 fqenydarls ridiantlre qvqdlfnkky gealgikypv qvpykriksn pgsviieglp
      721 pgipfrkpct fgsqnleril avadkikftv trpfqglipk pdeddanrlg ekvilreqvk
      781 elfnekygea lglnrpvlvp yklirdspda vevtglpddi pfrnpntydi hrlekilkar
      841 ehvrmviinq lqpfaeicsd akvpakdssi pkrkrkrvse gnsvssssss ssssssnpes
      901 vastnqislv qwpmymvdya glnvqlpgpl ny
//
LOCUS       XP_061009377             925 aa            linear   MAM 02-DEC-2023
DEFINITION  general transcription factor II-I repeat domain-containing protein
            1 isoform X3 [Dama dama].
ACCESSION   XP_061009377
VERSION     XP_061009377.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153394.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..925
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..925
                     /product="general transcription factor II-I repeat
                     domain-containing protein 1 isoform X3"
                     /calculated_mol_wt=102003
     Region          128..202
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          351..425
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          565..639
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          671..745
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          768..840
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     CDS             1..925
                     /gene="GTF2IRD1"
                     /coded_by="XM_061153394.1:166..2943"
                     /db_xref="GeneID:133063700"
ORIGIN      
        1 mallgkrcdi pangcgpdrw tsafarkdei itslvsalds mcsalsklna evacvavhde
       61 safvvgtekg rmflnarkel qsdflrfcrg pplkepeaeh pkkvprgegg srniprsale
      121 hgsdvyllrk mveevfdvly sealgrasvv plpyerllre pgllavqglp eglafrrpae
      181 ydpkalmail ehshrirfkl krpledggrd skalvelngv sllakgardc glhsqtpkgp
      241 pqdlpptaps ssvasflyst alpnhtvrel kqeapacplg psdlglgrpg pepkapaaqd
      301 fpdccgqkpt gpggpliqnv haskrilfsi vhdksekwda fiketedint lrecvqilfn
      361 sryaealgld hmvpvpyrki acdpeaveiv gipdkipfkr pctygvpklk rileerhsih
      421 fvikrmfder iftgnkftkd ptklepaspp edastevara avldlagtar sdksglsedc
      481 gpgtsgelsg lrpikieped pdiiqvtvpd pspaseemtd smpghlpsed sgygmemltd
      541 kgpsedprpe erpvedshgd virplrkqve llfntryaka igisepvkvp yskflmypee
      601 lfvvglpegi slrrpncfgi aklrkileas nsiqfvikrp elltegvkep ladsqenyda
      661 rlsridiant lreqvqdlfn kkygealgik ypvqvpykri ksnpgsviie glppgipfrk
      721 pctfgsqnle rilavadkik ftvtrpfqgl ipkpdeddan rlgekvilre qvkelfneky
      781 gealglnrpv lvpyklirds pdavevtglp ddipfrnpnt ydihrlekil karehvrmvi
      841 inqlqpfaei csdakvpakd ssipkrkrkr vsegnsvsss sssssssssn pesvastnqi
      901 slvqwpmymv dyaglnvqlp gplny
//
LOCUS       XP_061009378             853 aa            linear   MAM 02-DEC-2023
DEFINITION  general transcription factor II-I repeat domain-containing protein
            1 isoform X4 [Dama dama].
ACCESSION   XP_061009378
VERSION     XP_061009378.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153395.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..853
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..853
                     /product="general transcription factor II-I repeat
                     domain-containing protein 1 isoform X4"
                     /calculated_mol_wt=93084
     Region          128..202
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          351..425
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          565..639
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          690..764
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     CDS             1..853
                     /gene="GTF2IRD1"
                     /coded_by="XM_061153395.1:172..2733"
                     /db_xref="GeneID:133063700"
ORIGIN      
        1 mallgkrcdi pangcgpdrw tsafarkdei itslvsalds mcsalsklna evacvavhde
       61 safvvgtekg rmflnarkel qsdflrfcrg pplkepeaeh pkkvprgegg srniprsale
      121 hgsdvyllrk mveevfdvly sealgrasvv plpyerllre pgllavqglp eglafrrpae
      181 ydpkalmail ehshrirfkl krpledggrd skalvelngv sllakgardc glhsqtpkgp
      241 pqdlpptaps ssvasflyst alpnhtvrel kqeapacplg psdlglgrpg pepkapaaqd
      301 fpdccgqkpt gpggpliqnv haskrilfsi vhdksekwda fiketedint lrecvqilfn
      361 sryaealgld hmvpvpyrki acdpeaveiv gipdkipfkr pctygvpklk rileerhsih
      421 fvikrmfder iftgnkftkd ptklepaspp edastevara avldlagtar sdksglsedc
      481 gpgtsgelsg lrpikieped pdiiqvtvpd pspaseemtd smpghlpsed sgygmemltd
      541 kgpsedprpe erpvedshgd virplrkqve llfntryaka igisepvkvp yskflmypee
      601 lfvvglpegi slrrpncfgi aklrkileas nsiqfvikrp elltegvkep ladsqerdsg
      661 dplvdeslkr qgfqenydar lsridiantl reqvqdlfnk kygealgiky pvqvpykrik
      721 snpgsviieg lppgipfrkp ctfgsqnler ilavadkikf tvtrpfqgli pkpgpdslpa
      781 sssppppprp sphgelcqga pglflerpll ghmptaalpg plrrprpasp rpstglslga
      841 pltpaalpgq eeg
//
LOCUS       XP_061009379             779 aa            linear   MAM 02-DEC-2023
DEFINITION  general transcription factor II-I repeat domain-containing protein
            1 isoform X5 [Dama dama].
ACCESSION   XP_061009379
VERSION     XP_061009379.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153396.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..779
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..779
                     /product="general transcription factor II-I repeat
                     domain-containing protein 1 isoform X5"
                     /calculated_mol_wt=85847
     Region          128..202
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          351..425
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          565..639
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     Region          690..764
                     /region_name="GTF2I"
                     /note="GTF2I-like repeat; pfam02946"
                     /db_xref="CDD:460759"
     CDS             1..779
                     /gene="GTF2IRD1"
                     /coded_by="XM_061153396.1:171..2510"
                     /db_xref="GeneID:133063700"
ORIGIN      
        1 mallgkrcdi pangcgpdrw tsafarkdei itslvsalds mcsalsklna evacvavhde
       61 safvvgtekg rmflnarkel qsdflrfcrg pplkepeaeh pkkvprgegg srniprsale
      121 hgsdvyllrk mveevfdvly sealgrasvv plpyerllre pgllavqglp eglafrrpae
      181 ydpkalmail ehshrirfkl krpledggrd skalvelngv sllakgardc glhsqtpkgp
      241 pqdlpptaps ssvasflyst alpnhtvrel kqeapacplg psdlglgrpg pepkapaaqd
      301 fpdccgqkpt gpggpliqnv haskrilfsi vhdksekwda fiketedint lrecvqilfn
      361 sryaealgld hmvpvpyrki acdpeaveiv gipdkipfkr pctygvpklk rileerhsih
      421 fvikrmfder iftgnkftkd ptklepaspp edastevara avldlagtar sdksglsedc
      481 gpgtsgelsg lrpikieped pdiiqvtvpd pspaseemtd smpghlpsed sgygmemltd
      541 kgpsedprpe erpvedshgd virplrkqve llfntryaka igisepvkvp yskflmypee
      601 lfvvglpegi slrrpncfgi aklrkileas nsiqfvikrp elltegvkep ladsqerdsg
      661 dplvdeslkr qgfqenydar lsridiantl reqvqdlfnk kygealgiky pvqvpykrik
      721 snpgsviieg lppgipfrkp ctfgsqnler ilavadkikf tvtrpfqgli pkpdrffti
//
LOCUS       XP_061009380            1047 aa            linear   MAM 02-DEC-2023
DEFINITION  CAP-Gly domain-containing linker protein 2 isoform X1 [Dama dama].
ACCESSION   XP_061009380
VERSION     XP_061009380.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153397.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1047
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1047
                     /product="CAP-Gly domain-containing linker protein 2
                     isoform X1"
                     /calculated_mol_wt=115822
     Region          80..144
                     /region_name="CAP_GLY"
                     /note="CAP-Gly domain; pfam01302"
                     /db_xref="CDD:460154"
     Region          220..284
                     /region_name="CAP_GLY"
                     /note="CAP-Gly domain; pfam01302"
                     /db_xref="CDD:460154"
     Region          <355..>952
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..1047
                     /gene="CLIP2"
                     /coded_by="XM_061153397.1:322..3465"
                     /db_xref="GeneID:133063702"
ORIGIN      
        1 mqkpsglkpp grggkhsspm grtstgstsa sttvaatgsk egsplhkqas gppaaapaap
       61 ekpgakaaev gdefagdfvv gervwvngvk pgvvqylget qfapgqwagv vldepvgknd
      121 gavggvryfe cpalqgiftr pskltrqpaa egsgsdahsv esltaqnlsl hsgtatpplt
      181 srviplresv lnssvktgne sgsnlsdsgs vkrgdkdlrl gdrvlvggtk tgvvryvget
      241 dfakgewcgv eldeplgknd gavagtryfq cppkfglfap ihkvirigfp stspakakkt
      301 krmamgvsal thspssssis svssvassvg grpsrsgllt etssryarki sgttalqeal
      361 kekqqhieql laerdlerae vakatshice vekeiallka qheqyvaeae eklqrarllv
      421 esvrkekvdl snqleeerrk vedlqfrvee esitkgdlet qtqleharig eleqnlllek
      481 aqaerllrel adnrlttvae ksrvlqleee lslrreeiee lhqcllhsgp ppadhpeaae
      541 tlrlrerlls askerqresg llrdkyekal rayqaevdkl raanekyaqe vvdlkakvqq
      601 atsenmglmd nwkskldsla sdhqksledl katlnsgpga qqkeigelka vmegikmehq
      661 lelgnlrakh dietavhvke keglrqklqe aqeelaalqq hwraqlevqa gqhrlelqea
      721 qdqcrdaelr vrelekldve yqgqaqaief lkeqislaek kmldyellqr seaqskqeae
      781 rlrekllvte nrlqaveslc saqhthmies ndisgekirm ketveglqdk lnkrdkevta
      841 ltsqtetlra qvsalegkcr lgekkvdtlq kekrrlelel eavsrkthda sgqlvlisqe
      901 llrkerslne lrvllleanr hspgperdls revhkaewri keqklkddir glrekltgld
      961 kekslsdqrr yslidpssss apellrlqhq lmstedalrd aldqaqqver lveamrsgpd
     1021 ksqaisnsgs angvhqqdka hkqedkh
//
LOCUS       XP_061009381            1012 aa            linear   MAM 02-DEC-2023
DEFINITION  CAP-Gly domain-containing linker protein 2 isoform X2 [Dama dama].
ACCESSION   XP_061009381
VERSION     XP_061009381.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153398.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1012
                     /product="CAP-Gly domain-containing linker protein 2
                     isoform X2"
                     /calculated_mol_wt=111739
     Region          80..144
                     /region_name="CAP_GLY"
                     /note="CAP-Gly domain; pfam01302"
                     /db_xref="CDD:460154"
     Region          218..817
                     /region_name="NIP100"
                     /note="Dynactin complex subunit involved in mitotic
                     spindle partitioning in anaphase B [Cell cycle control,
                     cell division, chromosome partitioning]; COG5244"
                     /db_xref="CDD:227569"
     Region          220..284
                     /region_name="CAP_GLY"
                     /note="CAP-Gly domain; pfam01302"
                     /db_xref="CDD:460154"
     Region          733..>983
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1012
                     /gene="CLIP2"
                     /coded_by="XM_061153398.1:264..3302"
                     /db_xref="GeneID:133063702"
ORIGIN      
        1 mqkpsglkpp grggkhsspm grtstgstsa sttvaatgsk egsplhkqas gppaaapaap
       61 ekpgakaaev gdefagdfvv gervwvngvk pgvvqylget qfapgqwagv vldepvgknd
      121 gavggvryfe cpalqgiftr pskltrqpaa egsgsdahsv esltaqnlsl hsgtatpplt
      181 srviplresv lnssvktgne sgsnlsdsgs vkrgdkdlrl gdrvlvggtk tgvvryvget
      241 dfakgewcgv eldeplgknd gavagtryfq cppkfglfap ihkvirigfp stspakakkt
      301 krmamgvsal thspssssis svssvassvg grpsrsgllt etssryarki sgttalqeal
      361 kekqqhieql laerdlerae vakatshice vekeiallka qheqyvaeae eklqrarllv
      421 esvrkekvdl snqleeerrk vedlqfrvee esitkgdlel ttvaeksrvl qleeelslrr
      481 eeieelhqcl lhsgpppadh peaaetlrlr erllsasker qresgllrdk yekalrayqa
      541 evdklraane kyaqevvdlk akvqqatsen mglmdnwksk ldslasdhqk sledlkatln
      601 sgpgaqqkei gelkavmegi kmehqlelgn lrakhdieta vhvkekeglr qklqeaqeel
      661 aalqqhwraq levqagqhrl elqeaqdqcr daelrvrele kldveyqgqa qaieflkeqi
      721 slaekkmldy ellqrseaqs kqeaerlrek llvtenrlqa veslcsaqht hmiesndisg
      781 ekirmketve glqdklnkrd kevtaltsqt etlraqvsal egkcrlgekk vdtlqkekrr
      841 leleleavsr kthdasgqlv lisqellrke rslnelrvll leanrhspgp erdlsrevhk
      901 aewrikeqkl kddirglrek ltgldkeksl sdqrryslid pssssapell rlqhqlmste
      961 dalrdaldqa qqverlveam rsgpdksqai snsgsangvh qqdkahkqed kh
//
LOCUS       XP_061009382             352 aa            linear   MAM 02-DEC-2023
DEFINITION  replication factor C subunit 2 [Dama dama].
ACCESSION   XP_061009382
VERSION     XP_061009382.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153399.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..352
                     /product="replication factor C subunit 2"
                     /calculated_mol_wt=38555
     Region          34..346
                     /region_name="PLN03025"
                     /note="replication factor C subunit; Provisional"
                     /db_xref="CDD:178596"
     CDS             1..352
                     /gene="RFC2"
                     /coded_by="XM_061153399.1:50..1108"
                     /db_xref="GeneID:133063703"
ORIGIN      
        1 mealesgggt gecgaqdaap gpskapgsag hyelpwveky rpvklneivg nedtvsrlev
       61 faregnvpni iiagppgtgk ttsilclara llgpalkdav lelnasndrg idvvrnkikm
      121 faqqkvtlpk grhkiiilde adsmtdgaqq alrrtmeiys kttrfalacn asdkiiepiq
      181 srcavlrytk ltdaqilarl lsviekeevq ytddgleavi ftaqgdmrqa lnnlqstysg
      241 fgfinsenvf kvcdephpll vkemiqhcvs adideaykil ahlwhlgysp ediisnifrv
      301 cktfqmaeyl klefikeigy thmkiaegvn sllqmaglla rlcqktmapv as
//
LOCUS       XP_061009383             249 aa            linear   MAM 02-DEC-2023
DEFINITION  linker for activation of T-cells family member 2 isoform X1 [Dama
            dama].
ACCESSION   XP_061009383
VERSION     XP_061009383.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153400.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..249
                     /product="linker for activation of T-cells family member 2
                     isoform X1"
                     /calculated_mol_wt=27293
     Region          28..244
                     /region_name="LAT2"
                     /note="Linker for activation of T-cells family member 2;
                     pfam15703"
                     /db_xref="CDD:464812"
     CDS             1..249
                     /gene="LAT2"
                     /coded_by="XM_061153400.1:823..1572"
                     /db_xref="GeneID:133063705"
ORIGIN      
        1 msadtellwp gaalllllga aaglcvrcsr pgakksekiy eqrslqenqq sfavartytl
       61 vreawpgdta snmeltrpqs pssdsegptk egcglqtprn pggllpapsq prpplpcrkd
      121 kmlrfspsle dssspryqyf skgsrprsee ayidptstdy ynydpfqkpa eddddtnsye
      181 nvlickpkrm esgdegsedy qnsasiqqwr eskrvvesal reaplslags pdedgepdyv
      241 ngdvaatea
//
LOCUS       XP_061009384             249 aa            linear   MAM 02-DEC-2023
DEFINITION  linker for activation of T-cells family member 2 isoform X1 [Dama
            dama].
ACCESSION   XP_061009384
VERSION     XP_061009384.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153401.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..249
                     /product="linker for activation of T-cells family member 2
                     isoform X1"
                     /calculated_mol_wt=27293
     Region          28..244
                     /region_name="LAT2"
                     /note="Linker for activation of T-cells family member 2;
                     pfam15703"
                     /db_xref="CDD:464812"
     CDS             1..249
                     /gene="LAT2"
                     /coded_by="XM_061153401.1:900..1649"
                     /db_xref="GeneID:133063705"
ORIGIN      
        1 msadtellwp gaalllllga aaglcvrcsr pgakksekiy eqrslqenqq sfavartytl
       61 vreawpgdta snmeltrpqs pssdsegptk egcglqtprn pggllpapsq prpplpcrkd
      121 kmlrfspsle dssspryqyf skgsrprsee ayidptstdy ynydpfqkpa eddddtnsye
      181 nvlickpkrm esgdegsedy qnsasiqqwr eskrvvesal reaplslags pdedgepdyv
      241 ngdvaatea
//
LOCUS       XP_061009385             249 aa            linear   MAM 02-DEC-2023
DEFINITION  linker for activation of T-cells family member 2 isoform X1 [Dama
            dama].
ACCESSION   XP_061009385
VERSION     XP_061009385.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153402.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..249
                     /product="linker for activation of T-cells family member 2
                     isoform X1"
                     /calculated_mol_wt=27293
     Region          28..244
                     /region_name="LAT2"
                     /note="Linker for activation of T-cells family member 2;
                     pfam15703"
                     /db_xref="CDD:464812"
     CDS             1..249
                     /gene="LAT2"
                     /coded_by="XM_061153402.1:926..1675"
                     /db_xref="GeneID:133063705"
ORIGIN      
        1 msadtellwp gaalllllga aaglcvrcsr pgakksekiy eqrslqenqq sfavartytl
       61 vreawpgdta snmeltrpqs pssdsegptk egcglqtprn pggllpapsq prpplpcrkd
      121 kmlrfspsle dssspryqyf skgsrprsee ayidptstdy ynydpfqkpa eddddtnsye
      181 nvlickpkrm esgdegsedy qnsasiqqwr eskrvvesal reaplslags pdedgepdyv
      241 ngdvaatea
//
LOCUS       XP_061009386             249 aa            linear   MAM 02-DEC-2023
DEFINITION  linker for activation of T-cells family member 2 isoform X1 [Dama
            dama].
ACCESSION   XP_061009386
VERSION     XP_061009386.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153403.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..249
                     /product="linker for activation of T-cells family member 2
                     isoform X1"
                     /calculated_mol_wt=27293
     Region          28..244
                     /region_name="LAT2"
                     /note="Linker for activation of T-cells family member 2;
                     pfam15703"
                     /db_xref="CDD:464812"
     CDS             1..249
                     /gene="LAT2"
                     /coded_by="XM_061153403.1:819..1568"
                     /db_xref="GeneID:133063705"
ORIGIN      
        1 msadtellwp gaalllllga aaglcvrcsr pgakksekiy eqrslqenqq sfavartytl
       61 vreawpgdta snmeltrpqs pssdsegptk egcglqtprn pggllpapsq prpplpcrkd
      121 kmlrfspsle dssspryqyf skgsrprsee ayidptstdy ynydpfqkpa eddddtnsye
      181 nvlickpkrm esgdegsedy qnsasiqqwr eskrvvesal reaplslags pdedgepdyv
      241 ngdvaatea
//
LOCUS       XP_061009388             232 aa            linear   MAM 02-DEC-2023
DEFINITION  linker for activation of T-cells family member 2 isoform X2 [Dama
            dama].
ACCESSION   XP_061009388
VERSION     XP_061009388.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153405.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..232
                     /product="linker for activation of T-cells family member 2
                     isoform X2"
                     /calculated_mol_wt=25230
     Region          28..227
                     /region_name="LAT2"
                     /note="Linker for activation of T-cells family member 2;
                     pfam15703"
                     /db_xref="CDD:464812"
     CDS             1..232
                     /gene="LAT2"
                     /coded_by="XM_061153405.1:825..1523"
                     /db_xref="GeneID:133063705"
ORIGIN      
        1 msadtellwp gaalllllga aaglcvrcsr pgakksekiy eqrslqenqq sfavartytl
       61 vreawpgdta snmeltrpqs pssdsegptk egcglqtprn pggllpapsq prpplpcrkd
      121 kmlrfspsle dsssprdpts tdyynydpfq kpaeddddtn syenvlickp krmesgdegs
      181 edyqnsasiq qwreskrvve salreaplsl agspdedgep dyvngdvaat ea
//
LOCUS       XP_061009389             225 aa            linear   MAM 02-DEC-2023
DEFINITION  linker for activation of T-cells family member 2 isoform X3 [Dama
            dama].
ACCESSION   XP_061009389
VERSION     XP_061009389.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153406.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..225
                     /product="linker for activation of T-cells family member 2
                     isoform X3"
                     /calculated_mol_wt=24542
     Region          28..220
                     /region_name="LAT2"
                     /note="Linker for activation of T-cells family member 2;
                     pfam15703"
                     /db_xref="CDD:464812"
     CDS             1..225
                     /gene="LAT2"
                     /coded_by="XM_061153406.1:841..1518"
                     /db_xref="GeneID:133063705"
ORIGIN      
        1 msadtellwp gaalllllga aaglcvrcsr pgakksekiy eqrslqenqq sfavartytl
       61 vreawpgdta snmeltrpqs pssdsegptk egcglqtprn pggllpapsq prpplpcrkd
      121 kmlrfspsle dssspryqyf skgsrprsee ayidptstdy ynydpfqkpa eddddtnsye
      181 nvlickpkrm esesalreap lslagspded gepdyvngdv aatea
//
LOCUS       XP_061009390             208 aa            linear   MAM 02-DEC-2023
DEFINITION  linker for activation of T-cells family member 2 isoform X4 [Dama
            dama].
ACCESSION   XP_061009390
VERSION     XP_061009390.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153407.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..208
                     /product="linker for activation of T-cells family member 2
                     isoform X4"
                     /calculated_mol_wt=23103
     Region          28..203
                     /region_name="LAT2"
                     /note="Linker for activation of T-cells family member 2;
                     pfam15703"
                     /db_xref="CDD:464812"
     CDS             1..208
                     /gene="LAT2"
                     /coded_by="XM_061153407.1:798..1424"
                     /db_xref="GeneID:133063705"
ORIGIN      
        1 msadtellwp gaalllllga aaglcvrcsr pgakksekiy eqrslqenqq sfavartytl
       61 vreawpgdta snmeltrkdk mlrfspsled ssspryqyfs kgsrprseea yidptstdyy
      121 nydpfqkpae ddddtnsyen vlickpkrme sgdegsedyq nsasiqqwre skrvvesalr
      181 eaplslagsp dedgepdyvn gdvaatea
//
LOCUS       XP_061009391             191 aa            linear   MAM 02-DEC-2023
DEFINITION  linker for activation of T-cells family member 2 isoform X5 [Dama
            dama].
ACCESSION   XP_061009391
VERSION     XP_061009391.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153408.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..191
                     /product="linker for activation of T-cells family member 2
                     isoform X5"
                     /calculated_mol_wt=21040
     Region          28..186
                     /region_name="LAT2"
                     /note="Linker for activation of T-cells family member 2;
                     pfam15703"
                     /db_xref="CDD:464812"
     CDS             1..191
                     /gene="LAT2"
                     /coded_by="XM_061153408.1:804..1379"
                     /db_xref="GeneID:133063705"
ORIGIN      
        1 msadtellwp gaalllllga aaglcvrcsr pgakksekiy eqrslqenqq sfavartytl
       61 vreawpgdta snmeltrkdk mlrfspsled sssprdptst dyynydpfqk paeddddtns
      121 yenvlickpk rmesgdegse dyqnsasiqq wreskrvves alreaplsla gspdedgepd
      181 yvngdvaate a
//
LOCUS       XP_061009392             177 aa            linear   MAM 02-DEC-2023
DEFINITION  linker for activation of T-cells family member 2 isoform X6 [Dama
            dama].
ACCESSION   XP_061009392
VERSION     XP_061009392.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153409.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..177
                     /product="linker for activation of T-cells family member 2
                     isoform X6"
                     /calculated_mol_wt=19500
     Region          21..172
                     /region_name="LAT2"
                     /note="Linker for activation of T-cells family member 2;
                     pfam15703"
                     /db_xref="CDD:464812"
     CDS             1..177
                     /gene="LAT2"
                     /coded_by="XM_061153409.1:234..767"
                     /db_xref="GeneID:133063705"
ORIGIN      
        1 meltrpqsps sdsegptkeg cglqtprnpg gllpapsqpr pplpcrkdkm lrfspsleds
       61 sspryqyfsk gsrprseeay idptstdyyn ydpfqkpaed dddtnsyenv lickpkrmes
      121 gdegsedyqn sasiqqwres krvvesalre aplslagspd edgepdyvng dvaatea
//
LOCUS       XP_061009393             106 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein eL42-like [Dama dama].
ACCESSION   XP_061009393
VERSION     XP_061009393.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153410.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..106
                     /product="large ribosomal subunit protein eL42-like"
                     /calculated_mol_wt=12282
     Region          1..86
                     /region_name="PTZ00157"
                     /note="60S ribosomal protein L36a; Provisional"
                     /db_xref="CDD:240296"
     CDS             1..106
                     /gene="LOC133063707"
                     /coded_by="XM_061153410.1:105..425"
                     /db_xref="GeneID:133063707"
ORIGIN      
        1 mvnvpktrrt fckkcgkhqp hkvtqykkgk dslyaqgkrr ydrkqsgygg qtkpifrkka
       61 kttkkivlrl ecvepncrsk kmlaikrckh felggdkkrk gqviqf
//
LOCUS       XP_061009394             228 aa            linear   MAM 02-DEC-2023
DEFINITION  eukaryotic translation initiation factor 4H [Dama dama].
ACCESSION   XP_061009394
VERSION     XP_061009394.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153411.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..228
                     /product="eukaryotic translation initiation factor 4H"
                     /calculated_mol_wt=25078
     Region          37..120
                     /region_name="RRM_eIF4H"
                     /note="RNA recognition motif (RRM) found in eukaryotic
                     translation initiation factor 4H (eIF-4H) and similar
                     proteins; cd12401"
                     /db_xref="CDD:409835"
     Region          <40..>207
                     /region_name="SF-CC1"
                     /note="splicing factor, CC1-like family; TIGR01622"
                     /db_xref="CDD:273721"
     CDS             1..228
                     /gene="EIF4H"
                     /coded_by="XM_061153411.1:99..785"
                     /db_xref="GeneID:133063708"
ORIGIN      
        1 madfdtyddr ayssfgggrg srgsagghgs rsqkelptep pytayvgnlp fntvqgdida
       61 ifkdlsirsv rlvrdkdtdk fkgfcyvefd evdslkealt ydgallgdrs lrvdiaegrk
      121 qdkggfgfrk ggpddrgfrd dflggrggsr pgdrrtgppm gsrfrdgppl rgsnmdfrep
      181 teeeraqrpr lqlkprtvat plnqvanpns aifggarpre evvhkeqe
//
LOCUS       XP_061009395             647 aa            linear   MAM 02-DEC-2023
DEFINITION  LIM domain kinase 1 isoform X1 [Dama dama].
ACCESSION   XP_061009395
VERSION     XP_061009395.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153412.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..647
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..647
                     /product="LIM domain kinase 1 isoform X1"
                     /calculated_mol_wt=72426
     Region          5..77
                     /region_name="LIM1_LIMK1"
                     /note="The first LIM domain of LIMK1 (LIM domain Kinase
                     1); cd09462"
                     /db_xref="CDD:188846"
     Site            order(25,28,46,49,52,55,72,75)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188846"
     Region          84..138
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Site            order(84,87,105,108,111,114,134,137)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:259829"
     Region          160..258
                     /region_name="PDZ_LIMK-like"
                     /note="PDZ domain of LIM Kinase (LIMK) family, and related
                     domains; cd06754"
                     /db_xref="CDD:467236"
     Site            order(175..181,202,205,236,240,243..244)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467236"
     Region          345..611
                     /region_name="STKc_LIMK1"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     LIM domain kinase 1; cd14221"
                     /db_xref="CDD:271123"
     Site            order(345..349,353,366,368,384,397,413..416,419..420,422,
                     460,462,464..465,467,478,481,511..514)
                     /site_type="active"
                     /db_xref="CDD:271123"
     Site            order(345..349,353,366,368,384,397,413..416,419..420,460,
                     462,464..465,467,478)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271123"
     Site            order(349,420,422,460,462,464,481,511..514)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271123"
     Site            order(477..489,497..514)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271123"
     CDS             1..647
                     /gene="LIMK1"
                     /coded_by="XM_061153412.1:36..1979"
                     /db_xref="GeneID:133063709"
ORIGIN      
        1 mrltllcctw reermgeegs elpvcascgq riydgqylqa lnadwhadcf rccecsasls
       61 hqyyekdgql fckkdywary geschgcseh itkglvmvag elkyhpecfi cltcgtfigd
      121 gdtytlvehs klycghcyyq tvvtpvieqi lpdspgshlp htvtlvsipa sahgkrglsv
      181 sidpphslpg csaehshtvr vqgvdpgcms pdvknsihvg drileingtp irnvpldeid
      241 lliqetsrll qltlehdphd tlghgpgsep splgspahsp sgeagspgrq kpvlrscsid
      301 rspgagslgs pasqrkdlgr seslrvvcrp hrifrpsdli hgevlgkgcf gqaikvthre
      361 tgevmvmkel irfdeetqrt flkevkvmrc lehpnvlkfi gvlykdkrln fiteyikggt
      421 lrgiiksmds qypwsqrvsf akdiasgmay lhsmniihrd lnshnclvre nknvvvadfg
      481 larlmvdekt qpedlrslkk pdrkkrytvv gnpywmapem ingrsydekv dvfsfgivlc
      541 eiigrvnadp dylprtmdfg lnvrgfldry cppncppsff pitvrccdld pekrpsfvkl
      601 eqwletlrmh laghlplgaq leqldrgfwe tyrrgesglp ahpevpd
//
LOCUS       XP_061009396             613 aa            linear   MAM 02-DEC-2023
DEFINITION  LIM domain kinase 1 isoform X2 [Dama dama].
ACCESSION   XP_061009396
VERSION     XP_061009396.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153413.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..613
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..613
                     /product="LIM domain kinase 1 isoform X2"
                     /calculated_mol_wt=68674
     Region          <17..43
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Region          50..104
                     /region_name="LIM2_LIMK1"
                     /note="The second LIM domain of LIMK1 (LIM domain Kinase
                     1); cd09464"
                     /db_xref="CDD:188848"
     Site            order(50,53,71,74,77,80,100,103)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188848"
     Region          126..224
                     /region_name="PDZ_LIMK-like"
                     /note="PDZ domain of LIM Kinase (LIMK) family, and related
                     domains; cd06754"
                     /db_xref="CDD:467236"
     Site            order(141..147,168,171,202,206,209..210)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467236"
     Region          311..577
                     /region_name="STKc_LIMK1"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     LIM domain kinase 1; cd14221"
                     /db_xref="CDD:271123"
     Site            order(311..315,319,332,334,350,363,379..382,385..386,388,
                     426,428,430..431,433,444,447,477..480)
                     /site_type="active"
                     /db_xref="CDD:271123"
     Site            order(311..315,319,332,334,350,363,379..382,385..386,426,
                     428,430..431,433,444)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271123"
     Site            order(315,386,388,426,428,430,447,477..480)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271123"
     Site            order(443..455,463..480)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271123"
     CDS             1..613
                     /gene="LIMK1"
                     /coded_by="XM_061153413.1:116..1957"
                     /db_xref="GeneID:133063709"
ORIGIN      
        1 mlasplrrrr fflrrakcce csaslshqyy ekdgqlfckk dywarygesc hgcsehitkg
       61 lvmvagelky hpecficltc gtfigdgdty tlvehsklyc ghcyyqtvvt pvieqilpds
      121 pgshlphtvt lvsipasahg krglsvsidp phslpgcsae hshtvrvqgv dpgcmspdvk
      181 nsihvgdril eingtpirnv pldeidlliq etsrllqltl ehdphdtlgh gpgsepsplg
      241 spahspsgea gspgrqkpvl rscsidrspg agslgspasq rkdlgrsesl rvvcrphrif
      301 rpsdlihgev lgkgcfgqai kvthretgev mvmkelirfd eetqrtflke vkvmrclehp
      361 nvlkfigvly kdkrlnfite yikggtlrgi iksmdsqypw sqrvsfakdi asgmaylhsm
      421 niihrdlnsh nclvrenknv vvadfglarl mvdektqped lrslkkpdrk krytvvgnpy
      481 wmapemingr sydekvdvfs fgivlceiig rvnadpdylp rtmdfglnvr gfldrycppn
      541 cppsffpitv rccdldpekr psfvkleqwl etlrmhlagh lplgaqleql drgfwetyrr
      601 gesglpahpe vpd
//
LOCUS       XP_061009397             779 aa            linear   MAM 02-DEC-2023
DEFINITION  elastin [Dama dama].
ACCESSION   XP_061009397
VERSION     XP_061009397.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153414.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..779
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..779
                     /product="elastin"
                     /calculated_mol_wt=66429
     CDS             1..779
                     /gene="ELN"
                     /coded_by="XM_061153414.1:85..2424"
                     /db_xref="GeneID:133063711"
ORIGIN      
        1 magltaaarr pgvlllllcv lhpsqpggvp gavpggvpgg vffpgaglgg lgggalgpag
       61 kpakpgvggl agaglgagaf pgalvpggpa gaaaaykaaa kagaaglggv ggiggvgglg
      121 vstgavvppl gagvgagvkp gkvpgvglpg vypggvlpga garfpgigvl pgvptgagvk
      181 pkapagggaf agipgvgpfg gqqpgvplgy pikapklpgg yglpystgkl pygygpggva
      241 gaagkagypt gtgvgtqaaa aaakaaaklg aggagvlpgv gvggagipga pgaipgiggi
      301 agvgapdaaa aaaaakaakf gaagglgpgv igvpgvgvpg vgvpgvgvpg vgvpgvgvpg
      361 vvpgvgvpgv gvpgvgvpgv gvpgavspaa aakaaakaak fgarggvgvg giptfgagpg
      421 gfpgygdaaa aqaaaaakaa kigagaagal gglvpgapga ipgvpgvggv pgvgtpaaaa
      481 akaaakaaqf glapgvgvap gvvapgigva pgvapgvvap gigvapgvva pgigvapgig
      541 lgpgvigaga paaaksaaka aakaqlraaa glpagvpglg vgvgvpglgv gagvpglgvg
      601 lgvpglgaaa vpgtlaaaka akfapggvga lggigdlgga gipggvagpa aaaaaakaaa
      661 kaaqfglggv gglgvgglgv gglgavpgav glggvspaaa akaakfgaag lagvlgagrp
      721 fpvggvaarp gfglspifpg gagglgvggk ppkafggalg algfqggacl gkacgrkrk
//
LOCUS       XP_061009399             209 aa            linear   MAM 02-DEC-2023
DEFINITION  claudin-4 [Dama dama].
ACCESSION   XP_061009399
VERSION     XP_061009399.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153416.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..209
                     /product="claudin-4"
                     /calculated_mol_wt=22066
     Region          4..168
                     /region_name="PMP22_Claudin"
                     /note="PMP-22/EMP/MP20/Claudin family; cl21598"
                     /db_xref="CDD:473919"
     CDS             1..209
                     /gene="CLDN4"
                     /coded_by="XM_061153416.1:267..896"
                     /db_xref="GeneID:133063713"
ORIGIN      
        1 masmglqvmg ialavlgwlg ailscalpmw rvtafigsni vtsqtiwegl wmncvvqstg
       61 qmqckvydsl lalpqdlqaa raliviciil avfgvllsvv ggkctncvdd esskakimiv
      121 agvvfllagl lvmvpvswta nniirdfynp lvasgqkrem gaslyvgwaa agllmlggal
      181 lcfncpprnd kpysakysaa rsapasnyv
//
LOCUS       XP_061009400             219 aa            linear   MAM 02-DEC-2023
DEFINITION  claudin-3 [Dama dama].
ACCESSION   XP_061009400
VERSION     XP_061009400.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153417.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..219
                     /product="claudin-3"
                     /calculated_mol_wt=23188
     Region          3..169
                     /region_name="PMP22_Claudin"
                     /note="PMP-22/EMP/MP20/Claudin family; cl21598"
                     /db_xref="CDD:473919"
     CDS             1..219
                     /gene="CLDN3"
                     /coded_by="XM_061153417.1:248..907"
                     /db_xref="GeneID:133063714"
ORIGIN      
        1 msmgleiagt slavlgwlct ivccalpmwr vtafigssii taqitweglw mncvvqstgq
       61 mqckvydsll alpqdlqaar aliviailla vfgllvalvg aqctncvqdd takakitiva
      121 gvlfllaall tlipvswsan tiirdfynpl vpeaqkremg salyvgwaas alqllggall
      181 ccscpprdkf aptkivysap rstghgtgtg taydrkdyv
//
LOCUS       XP_061009401             304 aa            linear   MAM 02-DEC-2023
DEFINITION  syntaxin-1A isoform X1 [Dama dama].
ACCESSION   XP_061009401
VERSION     XP_061009401.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153418.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..304
                     /product="syntaxin-1A isoform X1"
                     /calculated_mol_wt=34557
     Region          30..197
                     /region_name="SynN"
                     /note="Syntaxin N-terminus domain; syntaxins are nervous
                     system-specific proteins implicated in the docking of
                     synaptic vesicles with the presynaptic plasma membrane;
                     they are a family of receptors for intracellular transport
                     vesicles; each target membrane may...; cd00179"
                     /db_xref="CDD:238105"
     Site            order(30,34,57,130..131,134..135,138,141..142,148,151,182)
                     /site_type="active"
                     /note="nSec1 interaction sites [active]"
                     /db_xref="CDD:238105"
     Site            order(77,88,91..92,99,103,106,113,136,141,144,150,
                     157..158,161..162,164..165,168,194)
                     /site_type="active"
                     /note="interdomain interaction site [active]"
                     /db_xref="CDD:238105"
     Site            order(174..184,193..197)
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238105"
     Region          207..275
                     /region_name="SNARE_syntaxin1"
                     /note="SNARE motif of syntaxin 1; cd15880"
                     /db_xref="CDD:277233"
     Site            order(212,214..215,217..222,224..226,228..229,231..233,
                     235..236,238..240,242..243,245..250,252..257,259..264,
                     266..268)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277233"
     Site            order(229,232..233,236..237,239..241,244..250,252..254,
                     256..261)
                     /site_type="other"
                     /note="Munc18 interface [polypeptide binding]"
                     /db_xref="CDD:277233"
     Site            242
                     /site_type="other"
                     /note="zero layer"
                     /db_xref="CDD:277233"
     CDS             1..304
                     /gene="STX1A"
                     /coded_by="XM_061153418.1:58..972"
                     /db_xref="GeneID:133063715"
ORIGIN      
        1 mkdrtqelrt akdsdddddv tvtvdrdrfm deffeqappw isaprapglg pqveeirgfi
       61 dkisenveev krkhsailas pnpdektkee leelmsdikk tankvrsklk sieqsieqee
      121 glnrssadlr irktqhstls rkfvevmsey natqsdyrer ckgriqrqle itgrtttsee
      181 ledmlesgnp aifasgiimd ssiskqalse ietrhseiik lensirelhd mfmdmamlve
      241 sqgemidrie ynvehsvdyv eravsdtkka vkyqskarrk kimiviccvv lgiviastfg
      301 gifg
//
LOCUS       XP_061009402             288 aa            linear   MAM 02-DEC-2023
DEFINITION  syntaxin-1A isoform X2 [Dama dama].
ACCESSION   XP_061009402
VERSION     XP_061009402.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153419.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..288
                     /product="syntaxin-1A isoform X2"
                     /calculated_mol_wt=32960
     Region          30..181
                     /region_name="SynN"
                     /note="Syntaxin N-terminus domain; syntaxins are nervous
                     system-specific proteins implicated in the docking of
                     synaptic vesicles with the presynaptic plasma membrane;
                     they are a family of receptors for intracellular transport
                     vesicles; each target membrane may...; cd00179"
                     /db_xref="CDD:238105"
     Site            order(30,34,41,114..115,118..119,122,125..126,132,135,166)
                     /site_type="active"
                     /note="nSec1 interaction sites [active]"
                     /db_xref="CDD:238105"
     Site            order(61,72,75..76,83,87,90,97,120,125,128,134,141..142,
                     145..146,148..149,152,178)
                     /site_type="active"
                     /note="interdomain interaction site [active]"
                     /db_xref="CDD:238105"
     Site            order(158..168,177..181)
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238105"
     Region          191..259
                     /region_name="SNARE_syntaxin1"
                     /note="SNARE motif of syntaxin 1; cd15880"
                     /db_xref="CDD:277233"
     Site            order(196,198..199,201..206,208..210,212..213,215..217,
                     219..220,222..224,226..227,229..234,236..241,243..248,
                     250..252)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277233"
     Site            order(213,216..217,220..221,223..225,228..234,236..238,
                     240..245)
                     /site_type="other"
                     /note="Munc18 interface [polypeptide binding]"
                     /db_xref="CDD:277233"
     Site            226
                     /site_type="other"
                     /note="zero layer"
                     /db_xref="CDD:277233"
     CDS             1..288
                     /gene="STX1A"
                     /coded_by="XM_061153419.1:58..924"
                     /db_xref="GeneID:133063715"
ORIGIN      
        1 mkdrtqelrt akdsdddddv tvtvdrdrfm deffeqveei rgfidkisen veevkrkhsa
       61 ilaspnpdek tkeeleelms dikktankvr sklksieqsi eqeeglnrss adlrirktqh
      121 stlsrkfvev mseynatqsd yrerckgriq rqleitgrtt tseeledmle sgnpaifasg
      181 iimdssiskq alseietrhs eiiklensir elhdmfmdma mlvesqgemi drieynvehs
      241 vdyveravsd tkkavkyqsk arrkkimivi ccvvlgivia stfggifg
//
LOCUS       XP_061009403             280 aa            linear   MAM 02-DEC-2023
DEFINITION  syntaxin-1A isoform X3 [Dama dama].
ACCESSION   XP_061009403
VERSION     XP_061009403.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153420.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..280
                     /product="syntaxin-1A isoform X3"
                     /calculated_mol_wt=31575
     Region          28..173
                     /region_name="SynN"
                     /note="Syntaxin N-terminus domain; syntaxins are nervous
                     system-specific proteins implicated in the docking of
                     synaptic vesicles with the presynaptic plasma membrane;
                     they are a family of receptors for intracellular transport
                     vesicles; each target membrane may...; cd00179"
                     /db_xref="CDD:238105"
     Site            order(33,106..107,110..111,114,117..118,124,127,158)
                     /site_type="active"
                     /note="nSec1 interaction sites [active]"
                     /db_xref="CDD:238105"
     Site            order(53,64,67..68,75,79,82,89,112,117,120,126,133..134,
                     137..138,140..141,144,170)
                     /site_type="active"
                     /note="interdomain interaction site [active]"
                     /db_xref="CDD:238105"
     Site            order(150..160,169..173)
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238105"
     Region          183..251
                     /region_name="SNARE_syntaxin1"
                     /note="SNARE motif of syntaxin 1; cd15880"
                     /db_xref="CDD:277233"
     Site            order(188,190..191,193..198,200..202,204..205,207..209,
                     211..212,214..216,218..219,221..226,228..233,235..240,
                     242..244)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277233"
     Site            order(205,208..209,212..213,215..217,220..226,228..230,
                     232..237)
                     /site_type="other"
                     /note="Munc18 interface [polypeptide binding]"
                     /db_xref="CDD:277233"
     Site            218
                     /site_type="other"
                     /note="zero layer"
                     /db_xref="CDD:277233"
     CDS             1..280
                     /gene="STX1A"
                     /coded_by="XM_061153420.1:110..952"
                     /db_xref="GeneID:133063715"
ORIGIN      
        1 mmttslspwt etaswmssss rapglgpqve eirgfidkis enveevkrkh sailaspnpd
       61 ektkeeleel msdikktank vrsklksieq sieqeeglnr ssadlrirkt qhstlsrkfv
      121 evmseynatq sdyrerckgr iqrqleitgr tttseeledm lesgnpaifa sgiimdssis
      181 kqalseietr hseiiklens irelhdmfmd mamlvesqge midrieynve hsvdyverav
      241 sdtkkavkyq skarrkkimi viccvvlgiv iastfggifg
//
LOCUS       XP_061009404             274 aa            linear   MAM 02-DEC-2023
DEFINITION  syntaxin-1A isoform X4 [Dama dama].
ACCESSION   XP_061009404
VERSION     XP_061009404.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153421.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..274
                     /product="syntaxin-1A isoform X4"
                     /calculated_mol_wt=30750
     Region          30..197
                     /region_name="SynN"
                     /note="Syntaxin N-terminus domain; syntaxins are nervous
                     system-specific proteins implicated in the docking of
                     synaptic vesicles with the presynaptic plasma membrane;
                     they are a family of receptors for intracellular transport
                     vesicles; each target membrane may...; cd00179"
                     /db_xref="CDD:238105"
     Site            order(30,34,57,130..131,134..135,138,141..142,148,151,182)
                     /site_type="active"
                     /note="nSec1 interaction sites [active]"
                     /db_xref="CDD:238105"
     Site            order(77,88,91..92,99,103,106,113,136,141,144,150,
                     157..158,161..162,164..165,168,194)
                     /site_type="active"
                     /note="interdomain interaction site [active]"
                     /db_xref="CDD:238105"
     Site            order(174..184,193..197)
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238105"
     Region          207..>242
                     /region_name="SNARE_syntaxin1-like"
                     /note="SNARE motif of syntaxin 1 and related proteins;
                     cd15848"
                     /db_xref="CDD:277201"
     Site            242
                     /site_type="other"
                     /note="zero layer"
                     /db_xref="CDD:277201"
     CDS             1..274
                     /gene="STX1A"
                     /coded_by="XM_061153421.1:58..882"
                     /db_xref="GeneID:133063715"
ORIGIN      
        1 mkdrtqelrt akdsdddddv tvtvdrdrfm deffeqappw isaprapglg pqveeirgfi
       61 dkisenveev krkhsailas pnpdektkee leelmsdikk tankvrsklk sieqsieqee
      121 glnrssadlr irktqhstls rkfvevmsey natqsdyrer ckgriqrqle itgrtttsee
      181 ledmlesgnp aifasgiimd ssiskqalse ietrhseiik lensirelhd mfmdmamlve
      241 sqallpqnpa sgplatqrga lwswgapgpa ggdd
//
LOCUS       XP_061009405             249 aa            linear   MAM 02-DEC-2023
DEFINITION  syntaxin-1A isoform X5 [Dama dama].
ACCESSION   XP_061009405
VERSION     XP_061009405.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153422.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..249
                     /product="syntaxin-1A isoform X5"
                     /calculated_mol_wt=28694
     Region          30..181
                     /region_name="SynN"
                     /note="Syntaxin N-terminus domain; syntaxins are nervous
                     system-specific proteins implicated in the docking of
                     synaptic vesicles with the presynaptic plasma membrane;
                     they are a family of receptors for intracellular transport
                     vesicles; each target membrane may...; cd00179"
                     /db_xref="CDD:238105"
     Site            order(30,34,41,114..115,118..119,122,125..126,132,135,166)
                     /site_type="active"
                     /note="nSec1 interaction sites [active]"
                     /db_xref="CDD:238105"
     Site            order(61,72,75..76,83,87,90,97,120,125,128,134,141..142,
                     145..146,148..149,152,178)
                     /site_type="active"
                     /note="interdomain interaction site [active]"
                     /db_xref="CDD:238105"
     Site            order(158..168,177..181)
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238105"
     Region          191..>226
                     /region_name="SNARE_syntaxin1-like"
                     /note="SNARE motif of syntaxin 1 and related proteins;
                     cd15848"
                     /db_xref="CDD:277201"
     Site            226
                     /site_type="other"
                     /note="zero layer"
                     /db_xref="CDD:277201"
     CDS             1..249
                     /gene="STX1A"
                     /coded_by="XM_061153422.1:58..807"
                     /db_xref="GeneID:133063715"
ORIGIN      
        1 mkdrtqelrt akdsdddddv tvtvdrdrfm deffeqveei rgfidkisen veevkrkhsa
       61 ilaspnpdek tkeeleelms dikktankvr sklksieqsi eqeeglnrss adlrirktqh
      121 stlsrkfvev mseynatqsd yrerckgriq rqleitgrtt tseeledmle sgnpaifasg
      181 iimdssiskq alseietrhs eiiklensir elhdmfmdma mlvesqwttw rgpcltprrp
      241 sstrarrag
//
LOCUS       XP_061009406             303 aa            linear   MAM 02-DEC-2023
DEFINITION  protein ABHD11 [Dama dama].
ACCESSION   XP_061009406
VERSION     XP_061009406.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153423.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..303
                     /product="protein ABHD11"
                     /calculated_mol_wt=33379
     Region          54..303
                     /region_name="PRK10673"
                     /note="esterase"
                     /db_xref="CDD:182637"
     CDS             1..303
                     /gene="ABHD11"
                     /coded_by="XM_061153423.1:139..1050"
                     /db_xref="GeneID:133063716"
ORIGIN      
        1 mvgwtrawtl pyrglgpsss sfsrlpiass ssqggteprp vplsyklldg eaaspplvfl
       61 hglfgsktnf nsiakalakq tgrrvltvda rnhgesphsp dmsyeamsqd lqdllpqlgl
      121 vpcvlighsm ggrtamllal qrpelverli avdispvett sssnfpnyvt amravdmane
      181 aslsgarkla derlrsviqs tsirqflltn lvevdgrfvw rlnldaldkh wdkildfpar
      241 qetysgptlf lrggnsqfll pshypeirrl fpraqmqtvp nashwvhsdr pqdfmaavrg
      301 fla
//
LOCUS       XP_061009408             226 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133063717 [Dama dama].
ACCESSION   XP_061009408
VERSION     XP_061009408.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153425.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..226
                     /product="uncharacterized protein LOC133063717"
                     /calculated_mol_wt=24035
     CDS             1..226
                     /gene="LOC133063717"
                     /coded_by="XM_061153425.1:236..916"
                     /db_xref="GeneID:133063717"
ORIGIN      
        1 mlcsmpgeqp aadnlprspl prrphtrdra rnlpwrdscc llsgvtqeae egaaprtdag
       61 gagkgypgae lgltgtrgqs cchlarglpw vsatgvgsap qsqgpphksq sitglealid
      121 ygpsslgnrp tlskwqsqlr kdgwirvgdr rscgaeaaag vvrqlqaprv krlapgsimq
      181 tnehrevkap tclfllrtvp svgrqstrlh hsglpaaper igprer
//
LOCUS       XP_061009409             336 aa            linear   MAM 02-DEC-2023
DEFINITION  probable 18S rRNA (guanine-N(7))-methyltransferase isoform X1 [Dama
            dama].
ACCESSION   XP_061009409
VERSION     XP_061009409.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153426.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..336
                     /product="probable 18S rRNA
                     (guanine-N(7))-methyltransferase isoform X1"
                     /calculated_mol_wt=36564
     Region          40..184
                     /region_name="UbiE"
                     /note="Ubiquinone/menaquinone biosynthesis C-methylase
                     UbiE/MenG [Coenzyme transport and metabolism]; COG2226"
                     /db_xref="CDD:441828"
     CDS             1..336
                     /gene="BUD23"
                     /coded_by="XM_061153426.1:94..1104"
                     /db_xref="GeneID:133063718"
ORIGIN      
        1 masrgrrpel rgppelyydk nearkyvrns rmidvqtkma eravellcvp edkpcyvldi
       61 gcgtglsgdy lsdeghywvg idispamlde aldrdtqgdv ilgdmgqgip fkpgtfdaci
      121 sisavqwlcn ankksdipak rlyrffssly svlvrggrav lqlypenseq lelittqatr
      181 agftggvvvd ypnsakakkf ylclfsgpst sipeglsedt eeekpaestf takslsgsdv
      241 avtarwrgdw gtlwdavcpy fwlrewspag rpwaacsvrp ssccpqqlap sspgclcpld
      301 prppscgpcg slspcilift lsshgsqhsa vlhsls
//
LOCUS       XP_061009410             281 aa            linear   MAM 02-DEC-2023
DEFINITION  probable 18S rRNA (guanine-N(7))-methyltransferase isoform X2 [Dama
            dama].
ACCESSION   XP_061009410
VERSION     XP_061009410.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153427.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..281
                     /product="probable 18S rRNA
                     (guanine-N(7))-methyltransferase isoform X2"
                     /calculated_mol_wt=31617
     Region          40..184
                     /region_name="UbiE"
                     /note="Ubiquinone/menaquinone biosynthesis C-methylase
                     UbiE/MenG [Coenzyme transport and metabolism]; COG2226"
                     /db_xref="CDD:441828"
     Region          204..279
                     /region_name="WBS_methylT"
                     /note="Methyltransferase involved in Williams-Beuren
                     syndrome; pfam12589"
                     /db_xref="CDD:432656"
     CDS             1..281
                     /gene="BUD23"
                     /coded_by="XM_061153427.1:94..939"
                     /db_xref="GeneID:133063718"
ORIGIN      
        1 masrgrrpel rgppelyydk nearkyvrns rmidvqtkma eravellcvp edkpcyvldi
       61 gcgtglsgdy lsdeghywvg idispamlde aldrdtqgdv ilgdmgqgip fkpgtfdaci
      121 sisavqwlcn ankksdipak rlyrffssly svlvrggrav lqlypenseq lelittqatr
      181 agftggvvvd ypnsakakkf ylclfsgpst sipeglsedt eeekpaestf takripyria
      241 rrgvvrksre wvlekkarrr rqgkevrpdt qytgrkrkpr f
//
LOCUS       XP_061009411             861 aa            linear   MAM 02-DEC-2023
DEFINITION  carbohydrate-responsive element-binding protein isoform X1 [Dama
            dama].
ACCESSION   XP_061009411
VERSION     XP_061009411.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153428.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..861
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..861
                     /product="carbohydrate-responsive element-binding protein
                     isoform X1"
                     /calculated_mol_wt=93877
     Region          83..198
                     /region_name="NES2-NLS_ChREBP"
                     /note="nuclear export signal 2 (NES2) and nuclear import
                     signal (NLS) domains found in carbohydrate-responsive
                     element-binding protein (ChREBP), and similar proteins;
                     cd21771"
                     /db_xref="CDD:439287"
     Site            order(119,123,126,129..133,136)
                     /site_type="other"
                     /note="putative heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:439287"
     Site            order(126,129..130)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:439287"
     Region          655..730
                     /region_name="bHLHzip_MLXIPL"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in MLX-interacting protein-like (MLXIPL) and similar
                     proteins; cd19689"
                     /db_xref="CDD:381532"
     Site            order(660,662..664,666..668,670..671,675,697..698)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381532"
     Site            order(674,677..678,680..681,684..686,699,702..703,706,
                     708..710,712..713,715..716,719,722..723,726..727,729..730)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381532"
     CDS             1..861
                     /gene="MLXIPL"
                     /coded_by="XM_061153428.1:50..2635"
                     /db_xref="GeneID:133063719"
ORIGIN      
        1 mtmagalagl vaglqgprvv pspdsdsdtd sedpntrrsa ggllrsqvih sghfmvssph
       61 sdsltrrrdq egslghadfg prsidptltr lfecmslays gklvspkwkn fkglkllcrd
      121 kirlnnaiwr awyiqyverr kspvcgfvtp lqgpeadehr kpqavvlegn ywkrrievvm
      181 reyhkwriyy kkrlrkssre gdllapkqve rgwqpperwc eqlftsvvpv llggpeeepg
      241 grqlldldcf lsdisdtlft mtqpsptplq lppedayvgn admiqpdltp lqpslddfme
      301 isdfftnhrp pqtptpsnfp ephgfgpmvd pvlgsgilgs evppacsgmt hlsghnrlqa
      361 rsscpgslds stylnsdfll pedpkpklpp tpapppllqy pspakglgle pcppppfppm
      421 apspallqee plfssrfsfp avppapgvsp lsapaafppt pqpgpgpapg papfpvdllp
      481 sgysephfgp hfpvpqgtrp rgkppapspr grkpgtrava patasptaaa gsnnpcltql
      541 ltaakpeqal epplvsgall rppgspqdtl pefpctffpp tpaaptpprl ppgpaapapp
      601 rplivpkver lsppapsgge rrlsaeltsl pgpgalsiri sppqpmlsrg rpdsktenrr
      661 ithisaeqkr rfniklgfdt lhglvstlst qpnlkmskat tlqktaeyit mlqqeraakq
      721 eeaqqlrdqi eelnaainlc qqqlpatgvp ithqrfdqmr dmfddyvrtr tlhnwkfwvf
      781 silirplfes fngmvstasl qslrqtslaw ldqycslpal rptvlnslrq lststsiltd
      841 pdcipeqatr avtegalgks l
//
LOCUS       XP_061009412             842 aa            linear   MAM 02-DEC-2023
DEFINITION  carbohydrate-responsive element-binding protein isoform X2 [Dama
            dama].
ACCESSION   XP_061009412
VERSION     XP_061009412.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153429.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..842
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..842
                     /product="carbohydrate-responsive element-binding protein
                     isoform X2"
                     /calculated_mol_wt=91708
     Region          83..198
                     /region_name="NES2-NLS_ChREBP"
                     /note="nuclear export signal 2 (NES2) and nuclear import
                     signal (NLS) domains found in carbohydrate-responsive
                     element-binding protein (ChREBP), and similar proteins;
                     cd21771"
                     /db_xref="CDD:439287"
     Site            order(119,123,126,129..133,136)
                     /site_type="other"
                     /note="putative heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:439287"
     Site            order(126,129..130)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:439287"
     Region          655..711
                     /region_name="bHLH_SF"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     cl00081"
                     /db_xref="CDD:469605"
     CDS             1..842
                     /gene="MLXIPL"
                     /coded_by="XM_061153429.1:50..2578"
                     /db_xref="GeneID:133063719"
ORIGIN      
        1 mtmagalagl vaglqgprvv pspdsdsdtd sedpntrrsa ggllrsqvih sghfmvssph
       61 sdsltrrrdq egslghadfg prsidptltr lfecmslays gklvspkwkn fkglkllcrd
      121 kirlnnaiwr awyiqyverr kspvcgfvtp lqgpeadehr kpqavvlegn ywkrrievvm
      181 reyhkwriyy kkrlrkssre gdllapkqve rgwqpperwc eqlftsvvpv llggpeeepg
      241 grqlldldcf lsdisdtlft mtqpsptplq lppedayvgn admiqpdltp lqpslddfme
      301 isdfftnhrp pqtptpsnfp ephgfgpmvd pvlgsgilgs evppacsgmt hlsghnrlqa
      361 rsscpgslds stylnsdfll pedpkpklpp tpapppllqy pspakglgle pcppppfppm
      421 apspallqee plfssrfsfp avppapgvsp lsapaafppt pqpgpgpapg papfpvdllp
      481 sgysephfgp hfpvpqgtrp rgkppapspr grkpgtrava patasptaaa gsnnpcltql
      541 ltaakpeqal epplvsgall rppgspqdtl pefpctffpp tpaaptpprl ppgpaapapp
      601 rplivpkver lsppapsgge rrlsaeltsl pgpgalsiri sppqpmlsrg rpdsktenrr
      661 ithisaeqkr rfniklgfdt lhglvstlst qpnlkeraak qeeaqqlrdq ieelnaainl
      721 cqqqlpatgv pithqrfdqm rdmfddyvrt rtlhnwkfwv fsilirplfe sfngmvstas
      781 lqslrqtsla wldqycslpa lrptvlnslr qlststsilt dpdcipeqat ravtegalgk
      841 sl
//
LOCUS       XP_061009413             707 aa            linear   MAM 02-DEC-2023
DEFINITION  carbohydrate-responsive element-binding protein isoform X3 [Dama
            dama].
ACCESSION   XP_061009413
VERSION     XP_061009413.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153430.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..707
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..707
                     /product="carbohydrate-responsive element-binding protein
                     isoform X3"
                     /calculated_mol_wt=76471
     Region          <1..19
                     /region_name="NES2-NLS_ChREBP-like"
                     /note="nuclear export signal 2 (NES2) and nuclear import
                     signal (NLS) domains found in carbohydrate-responsive
                     element-binding protein (ChREBP), MLX-interacting protein
                     (MLXIP), and similar proteins; cl45909"
                     /db_xref="CDD:459254"
     Region          501..576
                     /region_name="bHLHzip_MLXIPL"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in MLX-interacting protein-like (MLXIPL) and similar
                     proteins; cd19689"
                     /db_xref="CDD:381532"
     Site            order(506,508..510,512..514,516..517,521,543..544)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381532"
     Site            order(520,523..524,526..527,530..532,545,548..549,552,
                     554..556,558..559,561..562,565,568..569,572..573,575..576)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381532"
     CDS             1..707
                     /gene="MLXIPL"
                     /coded_by="XM_061153430.1:265..2388"
                     /db_xref="GeneID:133063719"
ORIGIN      
        1 mreyhkwriy ykkrlrkssr egdllapkqv ergwqpperw ceqlftsvvp vllggpeeep
       61 ggrqlldldc flsdisdtlf tmtqpsptpl qlppedayvg nadmiqpdlt plqpslddfm
      121 eisdfftnhr ppqtptpsnf pephgfgpmv dpvlgsgilg sevppacsgm thlsghnrlq
      181 arsscpgsld sstylnsdfl lpedpkpklp ptpapppllq ypspakglgl epcppppfpp
      241 mapspallqe eplfssrfsf pavppapgvs plsapaafpp tpqpgpgpap gpapfpvdll
      301 psgysephfg phfpvpqgtr prgkppapsp rgrkpgtrav apatasptaa agsnnpcltq
      361 lltaakpeqa lepplvsgal lrppgspvrq ralgggaapw aftptlcpsp lqqdtlpefp
      421 ctffpptpaa ptpprlppgp aapapprpli vpkverlspp apsggerrls aeltslpgpg
      481 alsirisppq pmlsrgrpds ktenrrithi saeqkrrfni klgfdtlhgl vstlstqpnl
      541 kmskattlqk taeyitmlqq eraakqeeaq qlrdqieeln aainlcqqql patgvpithq
      601 rfdqmrdmfd dyvrtrtlhn wkfwvfsili rplfesfngm vstaslqslr qtslawldqy
      661 cslpalrptv lnslrqlsts tsiltdpdci peqatravte galgksl
//
LOCUS       XP_061009414             225 aa            linear   MAM 02-DEC-2023
DEFINITION  dnaJ homolog subfamily C member 30, mitochondrial [Dama dama].
ACCESSION   XP_061009414
VERSION     XP_061009414.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153431.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..225
                     /product="dnaJ homolog subfamily C member 30,
                     mitochondrial"
                     /calculated_mol_wt=25658
     Region          49..110
                     /region_name="DnaJ"
                     /note="DnaJ domain; pfam00226"
                     /db_xref="CDD:395170"
     Region          50..>172
                     /region_name="PRK14299"
                     /note="chaperone protein DnaJ; Provisional"
                     /db_xref="CDD:237667"
     Site            order(76..78,87,90..91,94..95)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     CDS             1..225
                     /gene="DNAJC30"
                     /coded_by="XM_061153431.1:20..697"
                     /db_xref="GeneID:133063720"
ORIGIN      
        1 maarrdlrws rllwrlwqpr gvpqnprsgl gpevrtytrs dgpysrtaly dllgvsptat
       61 qaqikaayyr qsflyhpdrn sgsaeaaerf trisqayvvl gsttlrrkyd rgllsdedlr
      121 gpgvrpsktp aadpekprtp ppgprahgrg paspgakrtm fdfdafyqah ygeqlererr
      181 lrarreafrk mqedrakkgl rwdetrdlaf vlvlltvfli vssri
//
LOCUS       XP_061009416             446 aa            linear   MAM 02-DEC-2023
DEFINITION  transducin beta-like protein 2 isoform X1 [Dama dama].
ACCESSION   XP_061009416
VERSION     XP_061009416.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153433.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..446
                     /product="transducin beta-like protein 2 isoform X1"
                     /calculated_mol_wt=49834
     Region          <76..397
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          93..166
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          192..228
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          233..274
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          282..325
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          332..369
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..446
                     /gene="TBL2"
                     /coded_by="XM_061153433.1:78..1418"
                     /db_xref="GeneID:133063721"
ORIGIN      
        1 melpqmpelm glslllglla lvataavarg wlraeeetng rsagqkangc ppdkslkskk
       61 qkpqqrirke kpqqhnfthr llaaalkshs gnitcmdfss ngkylatcad drtvriwstk
      121 dflqrehrsm ranveldhai lvrfspdcra fivwlangdt lrifkmmkrd dggytftatp
      181 edfpkkhkap ivnigiadtg kfimtassdt tiliwnlkgq vlstintnhm nntyaaispc
      241 srfvascgft pdvkvwevcf gkkgdfqevv rafelkghsa avhffafsnd srrmasvskd
      301 gtwklwdtdv eykkqqdpyl lrtgrfeeas tvpcrlalsp daqvlalasg ssihlyntrr
      361 gekeecfeqv hgecisdlsf ditgrllasc gdravrlfhn tpgyravvee mqallkrasn
      421 estrqrlqqq ltqaqealkn lgalkk
//
LOCUS       XP_061009417             281 aa            linear   MAM 02-DEC-2023
DEFINITION  transducin beta-like protein 2 isoform X2 [Dama dama].
ACCESSION   XP_061009417
VERSION     XP_061009417.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153434.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..281
                     /product="transducin beta-like protein 2 isoform X2"
                     /calculated_mol_wt=31268
     Region          <22..232
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          27..63
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          68..109
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          117..160
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          167..204
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..281
                     /gene="TBL2"
                     /coded_by="XM_061153434.1:187..1032"
                     /db_xref="GeneID:133063721"
ORIGIN      
        1 mmkrddggyt ftatpedfpk khkapivnig iadtgkfimt assdttiliw nlkgqvlsti
       61 ntnhmnntya aispcsrfva scgftpdvkv wevcfgkkgd fqevvrafel kghsaavhff
      121 afsndsrrma svskdgtwkl wdtdveykkq qdpyllrtgr feeastvpcr lalspdaqvl
      181 alasgssihl yntrrgekee cfeqvhgeci sdlsfditgr llascgdrav rlfhntpgyr
      241 avveemqall krasnestrq rlqqqltqaq ealknlgalk k
//
LOCUS       XP_061009418             202 aa            linear   MAM 02-DEC-2023
DEFINITION  B-cell CLL/lymphoma 7 protein family member B isoform X1 [Dama
            dama].
ACCESSION   XP_061009418
VERSION     XP_061009418.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153435.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..202
                     /product="B-cell CLL/lymphoma 7 protein family member B
                     isoform X1"
                     /calculated_mol_wt=22066
     Region          4..50
                     /region_name="BCL_N"
                     /note="BCL7, N-terminal conserver region; pfam04714"
                     /db_xref="CDD:461406"
     Region          <15..202
                     /region_name="PTZ00108"
                     /note="DNA topoisomerase 2-like protein; Provisional"
                     /db_xref="CDD:240271"
     CDS             1..202
                     /gene="BCL7B"
                     /coded_by="XM_061153435.1:111..719"
                     /db_xref="GeneID:133063722"
ORIGIN      
        1 msgrsvraet rsrakddikk vmaaiekvrk wekkwvtvgd tslrifkwvp vtdskekeks
       61 ksnssaarep ngfpsdasan sslllefqde nsnqssvsdv yqlkvdsstn sspspqqses
      121 lspahtsdfr tddsqpptlg qeileepslp asevadeppt ltkeepvple tqiaeeeeds
      181 sapplkrfcm dqpavpqtas es
//
LOCUS       XP_061009419             179 aa            linear   MAM 02-DEC-2023
DEFINITION  B-cell CLL/lymphoma 7 protein family member B isoform X2 [Dama
            dama].
ACCESSION   XP_061009419
VERSION     XP_061009419.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153436.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..179
                     /product="B-cell CLL/lymphoma 7 protein family member B
                     isoform X2"
                     /calculated_mol_wt=19297
     Region          <4..27
                     /region_name="BCL_N"
                     /note="BCL7, N-terminal conserver region; pfam04714"
                     /db_xref="CDD:461406"
     CDS             1..179
                     /gene="BCL7B"
                     /coded_by="XM_061153436.1:273..812"
                     /db_xref="GeneID:133063722"
ORIGIN      
        1 mgsrartgek kwvtvgdtsl rifkwvpvtd skekeksksn ssaarepngf psdasanssl
       61 llefqdensn qssvsdvyql kvdsstnssp spqqseslsp ahtsdfrtdd sqpptlgqei
      121 leepslpase vadepptltk eepvpletqi aeeeedssap plkrfcmdqp avpqtases
//
LOCUS       XP_061009420            1481 aa            linear   MAM 02-DEC-2023
DEFINITION  tyrosine-protein kinase BAZ1B [Dama dama].
ACCESSION   XP_061009420
VERSION     XP_061009420.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153437.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1481
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1481
                     /product="tyrosine-protein kinase BAZ1B"
                     /calculated_mol_wt=170493
     Region          21..120
                     /region_name="WAC_Acf1_DNA_bd"
                     /note="ATP-utilizing chromatin assembly and remodelling
                     N-terminal; pfam10537"
                     /db_xref="CDD:463140"
     Region          604..668
                     /region_name="DDT"
                     /note="domain in different transcription and chromosome
                     remodeling factors; smart00571"
                     /db_xref="CDD:214726"
     Region          727..767
                     /region_name="WHIM1"
                     /note="WSTF, HB1, Itc1p, MBD9 motif 1; pfam15612"
                     /db_xref="CDD:464774"
     Region          <763..900
                     /region_name="DUF5401"
                     /note="Family of unknown function (DUF5401); pfam17380"
                     /db_xref="CDD:375164"
     Region          898..1025
                     /region_name="WSD"
                     /note="Williams-Beuren syndrome DDT (WSD), D-TOX E motif;
                     pfam15613"
                     /db_xref="CDD:464775"
     Region          1186..1231
                     /region_name="PHD_BAZ1B"
                     /note="PHD finger found in bromodomain adjacent to zinc
                     finger domain protein 1B (BAZ1B); cd15628"
                     /db_xref="CDD:277098"
     Site            order(1186,1198..1202,1206,1226)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277098"
     Region          1342..1438
                     /region_name="Bromo_WSTF_like"
                     /note="Bromodomain; Williams syndrome transcription
                     factor-like subfamily (WSTF-like). The Williams-Beuren
                     syndrome deletion transcript 9 is a putative
                     transcriptional regulator. WSTF was found to play a role
                     in vitamin D-mediated transcription as part of two...;
                     cd05505"
                     /db_xref="CDD:99937"
     Site            order(1366,1371,1374,1413,1417,1423)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99937"
     CDS             1..1481
                     /gene="BAZ1B"
                     /coded_by="XM_061153437.1:276..4721"
                     /db_xref="GeneID:133063723"
ORIGIN      
        1 mapllgrkpf plvkplpgee plftiahtqe afrtreeyea rleryseriw tckstgssql
       61 thkeaweeeq evaellkeef pawyeklvle mvhhntasle klvdtawlei mtkyavgeec
      121 dfevgkekml kvrivkihpl ekvdeeatek ksdgscdsps sdkenssqma qdhqkkeaig
      181 keeegrresi ndrarrsprk lptslkkger kwappkflph kydvklqned kiisnvpads
      241 lirterppnk eilryfirhn alragtgena pwvvedelvk kyslpskfsd flldpykymt
      301 lnpstkrknt gspdrkpskk sktdnsslss plnpklwchv hlkkslngsp lkvknsknsk
      361 speehleevm kimspnklha nfhipkkgpp gkksgknsdk plkakgrgkg ilngqkstgn
      421 skspkkglkt pktkmkqmtl ldmakgtqkv traprnsggt prssskphkh lppaalhlia
      481 yykenkdred kksalscvis ktarllssed rarlpeelrs lvqkrfelle hkkrwasmse
      541 eqrkeylkkk reelkeklke kakerrekem lerlekqkry edqeltgktl ptfklvdtpe
      601 glpntlfgdv amvveflscy sglllpdaqy pitavslmea lsaekggfly lnrvlvillq
      661 tllqdeiaed ygelgmklse ipltlhsvse lvrlclrksd vqeesegsda ddnkdsasfe
      721 dnevqdefle kletseffel tseeklqilt alchrilmty svqdhmetrq qmsaelwker
      781 lavlkeendk kraekqkrke mearnkengk eenglgkadr kkevvkfepq vdmeaedmis
      841 avksrrllai qakkereiqe remkvklere aeeerirkhk aaaekafqeg iaraklvmrr
      901 tpigtdrnhn rywlfsdevp glfiekgwvh dsidyrfshh rkdhtdspde dycprskkan
      961 lgknvsmntq hgpateiave ttipkqgqnl wflcdsqkel dellnclhpq giresqlker
     1021 lekryqdiih sihlarkpnl glkscdgnqe llnflrsdli evatrlqkgg lgyveetsef
     1081 earvislekl kdfgecvial qasvikkflq gfmapkqkrr klqsedsvkt eevdeekkma
     1141 eeakvasale kwktaireaq tfsrmhvllg mldacikwdm saenarckvc rkkgeddkli
     1201 lcdecnkafh lfclrpalye vpdgewqcpa cqpatarrns rgrnyteesa sedseddesd
     1261 eeeeeeeeee edyevaglrl rprrtvrgkq gvipatarpg rrpgkkphpt rrarpkappa
     1321 ddtevdelvl qtkrssrrqs lelqkceeil hkivkyrfsw pfrepvtrde aedyydiith
     1381 pmdfqtmqsk cscggyrsvq efladmkqvf tnaelyncrg shvlscmvkt eqclvallhk
     1441 hlpghpyvrr krkkfpdrla edegdsepep igqsrgrrqk k
//
LOCUS       XP_061009421            1204 aa            linear   MAM 02-DEC-2023
DEFINITION  nuclear envelope pore membrane protein POM 121C [Dama dama].
ACCESSION   XP_061009421
VERSION     XP_061009421.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153438.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1204
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1204
                     /product="nuclear envelope pore membrane protein POM 121C"
                     /calculated_mol_wt=121698
     Region          291..527
                     /region_name="POM121"
                     /note="POM121 family; pfam15229"
                     /db_xref="CDD:464572"
     Region          <532..759
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1204
                     /gene="POM121C"
                     /coded_by="XM_061153438.1:16..3630"
                     /db_xref="GeneID:133063725"
ORIGIN      
        1 mspaaaaagg gdrrrpiasv regrgwgcgg pagaallgls llglvlylvp aaaalawlav
       61 gataawwgls reprgsrals slvwnarrqr tllasppaks vangnllepr splegpdpae
      121 lllmgsylgk pgppqpapap eardlrerpg rrppvrtasp gqsahpqrvq ihpslptsll
      181 rpsrrpsyrd cgtlshrfvv tprrrypiqq aqysllgvlp tvcwngchkk tvlsarnskm
      241 vcspvtvria ppdskltrsp vpeqiinstl sspstsapdp caketvlnal kerkkrtvee
      301 edqifadgqe nkrrrhdssg sghsafepll angvpaafvp kpgslkrgln sqnsddhlnk
      361 rsrtssvssw tssthtggip spsrnaitss ysstrglsql wkrsgpsssp fsspassrsq
      421 tperpakkir eeelshhsss stplvtdkes qgekvadptt wkkqnswnsp stpgssgqrk
      481 rkvqllpsrr gdqltlpppp qlgysitaed ldlekkaslq wfnkvledkt daasasvtet
      541 spvsqssftf tspavgtass ptslqapsan plleslkkmq nspglpslpe pagvtttvad
      601 sppktpspla slsssqsgav patssdsrst tavlgltpas spgpitdaak spsaetsaks
      661 qalstpppsp kqsilfgmls tpaanppasv apavssaspt fkpifvappk sengdplpss
      721 pstvtavass ssalptttss papafkpifs svgpptsmpg ltpffkqtat latttsaplf
      781 tgqatatstv tsvstastst dsapkpafsf gvssvtstls svtsttasis qpflfgtppt
      841 sgasftptgg sifqfgkppa mpastsvttf gqslpgapqt apssssgsag fsgfgsslst
      901 sapatagqpt ltfssstapa fslpfasgak pplashpvan pqptfgaaeg qpqgaakpal
      961 vpsfgssftf gnsaapapta ppaptpaqpa fgglkatpsa fgtaagtrpa fgsatavfsf
     1021 gaattsgfgt ttqttssgts gsvfggttps pftfggpaaa agsgafgmsv atpgtsaasg
     1081 afgfgagqsg ttggtapfgg glsqnslgap nqntpfafsv tstpdskpvf ggtstptfgq
     1141 ntpapgvgat gsslsfgaas apaqgfvgvg pfgsaapsfs igagsktpga rqrlqarrqh
     1201 trkk
//
LOCUS       XP_061009422             466 aa            linear   MAM 02-DEC-2023
DEFINITION  28S rRNA (cytosine-C(5))-methyltransferase isoform X1 [Dama dama].
ACCESSION   XP_061009422
VERSION     XP_061009422.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153439.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..466
                     /product="28S rRNA (cytosine-C(5))-methyltransferase
                     isoform X1"
                     /calculated_mol_wt=50342
     Region          <138..426
                     /region_name="RsmB"
                     /note="16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF
                     family [Translation, ribosomal structure and biogenesis];
                     COG0144"
                     /db_xref="CDD:439914"
     CDS             1..466
                     /gene="NSUN5"
                     /coded_by="XM_061153439.1:41..1441"
                     /db_xref="GeneID:133063726"
ORIGIN      
        1 mavysaaaav lagvesrqgs lkglvyasnf qnvkqlyalv cetqrysavl davianagll
       61 raekklrphl akvlvydlll gkgfrgrggr wkpllerhqa rlkaelarlk vrqgvsrned
      121 llevgskpgs asqvprfvrv ntlktcaeda idyfkrqgfs yqgrasgled iralkgkcfl
      181 ldtllpellv fpaqtdlhdh plyqaghlil qdkasclpam llapppgshv idacaapgnk
      241 tshlaallkn qgkifafdqd akrlasmatl laragvscce laeqdflavs psdqrycqvq
      301 yilldpscsg sgmpsrqlee pkagmpsper lralaafqqr alshaltfpa lrrlvystcs
      361 vcqeenedvv raalqqspga frlapvlpsw phrglgafpg aehclraspe ttltggffia
      421 vleraevpts vsqaeapvse ltpgpapkrr krrrkaaaap stqpgt
//
LOCUS       XP_061009424             401 aa            linear   MAM 02-DEC-2023
DEFINITION  28S rRNA (cytosine-C(5))-methyltransferase isoform X2 [Dama dama].
ACCESSION   XP_061009424
VERSION     XP_061009424.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153441.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..401
                     /product="28S rRNA (cytosine-C(5))-methyltransferase
                     isoform X2"
                     /calculated_mol_wt=43053
     Region          <127..361
                     /region_name="RsmB"
                     /note="16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF
                     family [Translation, ribosomal structure and biogenesis];
                     COG0144"
                     /db_xref="CDD:439914"
     CDS             1..401
                     /gene="NSUN5"
                     /coded_by="XM_061153441.1:29..1234"
                     /db_xref="GeneID:133063726"
ORIGIN      
        1 mavysaaaav lagvesrqgs lkglvyasnf qnvkqlyalv cetqrysavl davianagll
       61 raekklrphl akvlvydlll gkgfrgrggr wkpllerhqa rlkaelarlk vrqgvsrned
      121 llevgskpgs dlhdhplyqa ghlilqdkas clpamllapp pgshvidaca apgnktshla
      181 allknqgkif afdqdakrla smatllarag vsccelaeqd flavspsdqr ycqvqyilld
      241 pscsgsgmps rqleepkagm psperlrala afqqralsha ltfpalrrlv ystcsvcqee
      301 nedvvraalq qspgafrlap vlpswphrgl gafpgaehcl raspettltg gffiavlera
      361 evptsvsqae apvseltpgp apkrrkrrrk aaaapstqpg t
//
LOCUS       XP_061009425            1038 aa            linear   MAM 02-DEC-2023
DEFINITION  huntingtin-interacting protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061009425
VERSION     XP_061009425.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153442.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1038
                     /product="huntingtin-interacting protein 1 isoform X1"
                     /calculated_mol_wt=116595
     Region          39..306
                     /region_name="ANTH"
                     /note="ANTH domain; pfam07651"
                     /db_xref="CDD:400137"
     Site            order(46,56,58..59)
                     /site_type="other"
                     /note="PtdIns(4,5)P2-binding site [chemical binding]"
                     /db_xref="CDD:340810"
     Region          385..>645
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          483..581
                     /region_name="HIP1_clath_bdg"
                     /note="Clathrin-binding domain of Huntingtin-interacting
                     protein 1; pfam16515"
                     /db_xref="CDD:465154"
     Region          815..1013
                     /region_name="ILWEQ"
                     /note="I/LWEQ domain; smart00307"
                     /db_xref="CDD:214607"
     CDS             1..1038
                     /gene="HIP1"
                     /coded_by="XM_061153442.1:58..3174"
                     /db_xref="GeneID:133063727"
ORIGIN      
        1 mdrmassmkq vpnplpkvls rrgvgagmea aeresfertq tvsinkaint qvvavkekha
       61 rtcilgthhe kgaqtfwsvv nrlplssnav lcwkfchvfh kllrdghpnv lkdslrykse
      121 lsdmsrmwgh lsegygqlcs iylkllrtkm eyhtknprfp gnlhmsdrql eeagesdvnn
      181 ffqltvemfd ylecelnlfq tvfnsldmsr svsvttagqc rlapliqvil dcshlydyav
      241 kllfklhscl padtlqghrd rfleqftklk dffyrssnlq yfkrliqipq lpenppnflr
      301 asalsehvsp vvvipaeass pdsepvlekd dlmgmdasqq qnsfdskfdd ifgsssssdp
      361 fnfnsqngvn kdekdqlidq lfgetrelka qlenmktesq ravlqlkgrt seleaelaeq
      421 qhlrqqaade seflraelde lkkkredtek aqrslteier kaqaneqrys klkekynelv
      481 qnhadllrkn aevtkqvsva rqaqvdlere kkeledsfqr isdqaqrktq eqtevlenlk
      541 qelatskqel qivqgslens aqseakwtaq itdlekdrds lmnamacree elcalrkqle
      601 ytqlklssaq esicqlekdq hkmllaesrr aaeqvvqeal rlfeeptlss cagsadhlls
      661 kvnstsscie qlekcwsqyl acpedisgll hsvtllahlt sdtivhgsat clrappesad
      721 slieackqyg ketltylsfl eeerifenad stamrscltr imaisedllp rgldikqeel
      781 gdlvdkemaa tsaaieaata rieemlsksr agdtgvklev nerilgscts lmqaiqilvv
      841 askelqreiv esgrgtaspk efyaknsrwt eglisaakav gwgatvlvda admvvqgrgk
      901 feelmvcsre iaastaqlva askvkadkns pnlaqllqas ravnqataev vastisgksq
      961 iedtdsmdfs sitltqikrq emdsqvrvle lenelqkerq klgelrkkhy elagvaegwe
     1021 egteappstl qeakteke
//
LOCUS       XP_061009426            1037 aa            linear   MAM 02-DEC-2023
DEFINITION  huntingtin-interacting protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061009426
VERSION     XP_061009426.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153443.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1037
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1037
                     /product="huntingtin-interacting protein 1 isoform X2"
                     /calculated_mol_wt=116467
     Region          39..306
                     /region_name="ANTH"
                     /note="ANTH domain; pfam07651"
                     /db_xref="CDD:400137"
     Site            order(46,56,58..59)
                     /site_type="other"
                     /note="PtdIns(4,5)P2-binding site [chemical binding]"
                     /db_xref="CDD:340810"
     Region          384..>644
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          482..580
                     /region_name="HIP1_clath_bdg"
                     /note="Clathrin-binding domain of Huntingtin-interacting
                     protein 1; pfam16515"
                     /db_xref="CDD:465154"
     Region          814..1012
                     /region_name="ILWEQ"
                     /note="I/LWEQ domain; smart00307"
                     /db_xref="CDD:214607"
     CDS             1..1037
                     /gene="HIP1"
                     /coded_by="XM_061153443.1:58..3171"
                     /db_xref="GeneID:133063727"
ORIGIN      
        1 mdrmassmkq vpnplpkvls rrgvgagmea aeresfertq tvsinkaint qvvavkekha
       61 rtcilgthhe kgaqtfwsvv nrlplssnav lcwkfchvfh kllrdghpnv lkdslrykse
      121 lsdmsrmwgh lsegygqlcs iylkllrtkm eyhtknprfp gnlhmsdrql eeagesdvnn
      181 ffqltvemfd ylecelnlfq tvfnsldmsr svsvttagqc rlapliqvil dcshlydyav
      241 kllfklhscl padtlqghrd rfleqftklk dffyrssnlq yfkrliqipq lpenppnflr
      301 asalsehvsp vvvipaeass pdsepvlekd dlmgmdasqq nsfdskfddi fgsssssdpf
      361 nfnsqngvnk dekdqlidql fgetrelkaq lenmktesqr avlqlkgrts eleaelaeqq
      421 hlrqqaades eflraeldel kkkredteka qrslteierk aqaneqrysk lkekynelvq
      481 nhadllrkna evtkqvsvar qaqvdlerek keledsfqri sdqaqrktqe qtevlenlkq
      541 elatskqelq ivqgslensa qseakwtaqi tdlekdrdsl mnamacreee lcalrkqley
      601 tqlklssaqe sicqlekdqh kmllaesrra aeqvvqealr lfeeptlssc agsadhllsk
      661 vnstsscieq lekcwsqyla cpedisgllh svtllahlts dtivhgsatc lrappesads
      721 lieackqygk etltylsfle eerifenads tamrscltri maisedllpr gldikqeelg
      781 dlvdkemaat saaieaatar ieemlsksra gdtgvklevn erilgsctsl mqaiqilvva
      841 skelqreive sgrgtaspke fyaknsrwte glisaakavg wgatvlvdaa dmvvqgrgkf
      901 eelmvcsrei aastaqlvaa skvkadknsp nlaqllqasr avnqataevv astisgksqi
      961 edtdsmdfss itltqikrqe mdsqvrvlel enelqkerqk lgelrkkhye lagvaegwee
     1021 gteappstlq eakteke
//
LOCUS       XP_061009427            1004 aa            linear   MAM 02-DEC-2023
DEFINITION  huntingtin-interacting protein 1 isoform X3 [Dama dama].
ACCESSION   XP_061009427
VERSION     XP_061009427.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153444.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1004
                     /product="huntingtin-interacting protein 1 isoform X3"
                     /calculated_mol_wt=112883
     Region          7..272
                     /region_name="ANTH"
                     /note="ANTH domain; pfam07651"
                     /db_xref="CDD:400137"
     Site            order(12,22,24..25)
                     /site_type="other"
                     /note="PtdIns(4,5)P2-binding site [chemical binding]"
                     /db_xref="CDD:340810"
     Region          351..>611
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          449..547
                     /region_name="HIP1_clath_bdg"
                     /note="Clathrin-binding domain of Huntingtin-interacting
                     protein 1; pfam16515"
                     /db_xref="CDD:465154"
     Region          781..979
                     /region_name="ILWEQ"
                     /note="I/LWEQ domain; smart00307"
                     /db_xref="CDD:214607"
     CDS             1..1004
                     /gene="HIP1"
                     /coded_by="XM_061153444.1:116..3130"
                     /db_xref="GeneID:133063727"
ORIGIN      
        1 mdvnkmtvsi nkaintqvva vkekhartci lgthhekgaq tfwsvvnrlp lssnavlcwk
       61 fchvfhkllr dghpnvlkds lrykselsdm srmwghlseg ygqlcsiylk llrtkmeyht
      121 knprfpgnlh msdrqleeag esdvnnffql tvemfdylec elnlfqtvfn sldmsrsvsv
      181 ttagqcrlap liqvildcsh lydyavkllf klhsclpadt lqghrdrfle qftklkdffy
      241 rssnlqyfkr liqipqlpen ppnflrasal sehvspvvvi paeasspdse pvlekddlmg
      301 mdasqqqnsf dskfddifgs ssssdpfnfn sqngvnkdek dqlidqlfge trelkaqlen
      361 mktesqravl qlkgrtsele aelaeqqhlr qqaadesefl raeldelkkk redtekaqrs
      421 lteierkaqa neqrysklke kynelvqnha dllrknaevt kqvsvarqaq vdlerekkel
      481 edsfqrisdq aqrktqeqte vlenlkqela tskqelqivq gslensaqse akwtaqitdl
      541 ekdrdslmna macreeelca lrkqleytql klssaqesic qlekdqhkml laesrraaeq
      601 vvqealrlfe eptlsscags adhllskvns tsscieqlek cwsqylacpe disgllhsvt
      661 llahltsdti vhgsatclra ppesadslie ackqygketl tylsfleeer ifenadstam
      721 rscltrimai sedllprgld ikqeelgdlv dkemaatsaa ieaatariee mlsksragdt
      781 gvklevneri lgsctslmqa iqilvvaske lqreivesgr gtaspkefya knsrwtegli
      841 saakavgwga tvlvdaadmv vqgrgkfeel mvcsreiaas taqlvaaskv kadknspnla
      901 qllqasravn qataevvast isgksqiedt dsmdfssitl tqikrqemds qvrvlelene
      961 lqkerqklge lrkkhyelag vaegweegte appstlqeak teke
//
LOCUS       XP_061009428              95 aa            linear   MAM 02-DEC-2023
DEFINITION  C-C motif chemokine 26 [Dama dama].
ACCESSION   XP_061009428
VERSION     XP_061009428.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153445.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..95
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..95
                     /product="C-C motif chemokine 26"
                     /calculated_mol_wt=10822
     Region          34..90
                     /region_name="Chemokine_CC"
                     /note="1 of 4 subgroup designations based on the
                     arrangement of the two N-terminal cysteine residues;
                     includes a number of secreted growth factors and
                     interferons involved in mitogenic, chemotactic, and
                     inflammatory activity; some members (e.g. 2HCC) contain
                     an...; cd00272"
                     /db_xref="CDD:238170"
     Site            order(34..38,40..47,57..58,80..90)
                     /site_type="active"
                     /note="putative receptor binding site [active]"
                     /db_xref="CDD:238170"
     Site            order(36,38,51,53,58,63..65,73..75,81..82,85..86,89..90)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:238170"
     Site            order(36,38,55,57..58,64,72,74)
                     /site_type="other"
                     /note="dimer interface (P form) [polypeptide binding]"
                     /db_xref="CDD:238170"
     Site            order(36,64,73)
                     /site_type="active"
                     /note="putative receptor binding cleft [active]"
                     /db_xref="CDD:238170"
     Site            order(36..38,40..47)
                     /site_type="active"
                     /note="N-loop [active]"
                     /db_xref="CDD:238170"
     Site            order(38,51,53,63,65,73,75,81..82,85..86,89..90)
                     /site_type="other"
                     /note="dimer interface (I form) [polypeptide binding]"
                     /db_xref="CDD:238170"
     Site            order(40..42,45..47,69,71)
                     /site_type="other"
                     /note="putative glycosaminoglycan (GAG) binding site
                     [chemical binding]"
                     /db_xref="CDD:238170"
     Site            order(53,60,78,80,83..84,87)
                     /site_type="other"
                     /note="putative glycosaminoglycan (GAG) binding site
                     [chemical binding]"
                     /db_xref="CDD:238170"
     Site            57..58
                     /site_type="other"
                     /note="30s-loop"
                     /db_xref="CDD:238170"
     Site            order(67,69)
                     /site_type="other"
                     /note="40s-loop"
                     /db_xref="CDD:238170"
     CDS             1..95
                     /gene="CCL26"
                     /coded_by="XM_061153445.1:179..466"
                     /db_xref="GeneID:133063729"
ORIGIN      
        1 mmknfpvasl lflvlilsvd lgattrgsdv akfccfqysq kplpwkwvrs yeftrdscsq
       61 kavifttkrg qkvcaqpkev wvqkyisllk aqqql
//
LOCUS       XP_061009429             116 aa            linear   MAM 02-DEC-2023
DEFINITION  C-C motif chemokine 24 [Dama dama].
ACCESSION   XP_061009429
VERSION     XP_061009429.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153446.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..116
                     /product="C-C motif chemokine 24"
                     /calculated_mol_wt=12549
     Region          27..86
                     /region_name="SCY"
                     /note="Intercrine alpha family (small cytokine C-X-C)
                     (chemokine CXC); smart00199"
                     /db_xref="CDD:197570"
     Site            order(30..34,36..43,54..55,77..87)
                     /site_type="active"
                     /note="putative receptor binding site [active]"
                     /db_xref="CDD:238170"
     Site            order(32,34,47,49,55,60..62,70..72,78..79,82..83,86..87)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:238170"
     Site            order(32,34,51,54..55,61,69,71)
                     /site_type="other"
                     /note="dimer interface (P form) [polypeptide binding]"
                     /db_xref="CDD:238170"
     Site            order(32,61,70)
                     /site_type="active"
                     /note="putative receptor binding cleft [active]"
                     /db_xref="CDD:238170"
     Site            order(32..34,36..43)
                     /site_type="active"
                     /note="N-loop [active]"
                     /db_xref="CDD:238170"
     Site            order(34,47,49,60,62,70,72,78..79,82..83,86..87)
                     /site_type="other"
                     /note="dimer interface (I form) [polypeptide binding]"
                     /db_xref="CDD:238170"
     Site            order(36..38,41..43,66,68)
                     /site_type="other"
                     /note="putative glycosaminoglycan (GAG) binding site
                     [chemical binding]"
                     /db_xref="CDD:238170"
     Site            order(49,57,75,77,80..81,84)
                     /site_type="other"
                     /note="putative glycosaminoglycan (GAG) binding site
                     [chemical binding]"
                     /db_xref="CDD:238170"
     Site            54..55
                     /site_type="other"
                     /note="30s-loop"
                     /db_xref="CDD:238170"
     Site            order(64,66)
                     /site_type="other"
                     /note="40s-loop"
                     /db_xref="CDD:238170"
     CDS             1..116
                     /gene="CCL24"
                     /coded_by="XM_061153446.1:260..610"
                     /db_xref="GeneID:133063730"
ORIGIN      
        1 magpvtmats llllalcitp adsvtlpssc citfiskkip esrvisyqlt ngsvcpqagv
       61 ifttrkgqkf cgnpklpwvq kyvknldakq kkastrtram nttapfwkhl anstfi
//
LOCUS       XP_061009430             116 aa            linear   MAM 02-DEC-2023
DEFINITION  C-C motif chemokine 24 [Dama dama].
ACCESSION   XP_061009430
VERSION     XP_061009430.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153447.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..116
                     /product="C-C motif chemokine 24"
                     /calculated_mol_wt=12549
     Region          27..86
                     /region_name="SCY"
                     /note="Intercrine alpha family (small cytokine C-X-C)
                     (chemokine CXC); smart00199"
                     /db_xref="CDD:197570"
     Site            order(30..34,36..43,54..55,77..87)
                     /site_type="active"
                     /note="putative receptor binding site [active]"
                     /db_xref="CDD:238170"
     Site            order(32,34,47,49,55,60..62,70..72,78..79,82..83,86..87)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:238170"
     Site            order(32,34,51,54..55,61,69,71)
                     /site_type="other"
                     /note="dimer interface (P form) [polypeptide binding]"
                     /db_xref="CDD:238170"
     Site            order(32,61,70)
                     /site_type="active"
                     /note="putative receptor binding cleft [active]"
                     /db_xref="CDD:238170"
     Site            order(32..34,36..43)
                     /site_type="active"
                     /note="N-loop [active]"
                     /db_xref="CDD:238170"
     Site            order(34,47,49,60,62,70,72,78..79,82..83,86..87)
                     /site_type="other"
                     /note="dimer interface (I form) [polypeptide binding]"
                     /db_xref="CDD:238170"
     Site            order(36..38,41..43,66,68)
                     /site_type="other"
                     /note="putative glycosaminoglycan (GAG) binding site
                     [chemical binding]"
                     /db_xref="CDD:238170"
     Site            order(49,57,75,77,80..81,84)
                     /site_type="other"
                     /note="putative glycosaminoglycan (GAG) binding site
                     [chemical binding]"
                     /db_xref="CDD:238170"
     Site            54..55
                     /site_type="other"
                     /note="30s-loop"
                     /db_xref="CDD:238170"
     Site            order(64,66)
                     /site_type="other"
                     /note="40s-loop"
                     /db_xref="CDD:238170"
     CDS             1..116
                     /gene="CCL24"
                     /coded_by="XM_061153447.1:461..811"
                     /db_xref="GeneID:133063730"
ORIGIN      
        1 magpvtmats llllalcitp adsvtlpssc citfiskkip esrvisyqlt ngsvcpqagv
       61 ifttrkgqkf cgnpklpwvq kyvknldakq kkastrtram nttapfwkhl anstfi
//
LOCUS       XP_061009432             364 aa            linear   MAM 02-DEC-2023
DEFINITION  rhomboid domain-containing protein 2 isoform X1 [Dama dama].
ACCESSION   XP_061009432
VERSION     XP_061009432.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153449.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..364
                     /product="rhomboid domain-containing protein 2 isoform X1"
                     /calculated_mol_wt=39336
     Region          54..199
                     /region_name="Rhomboid"
                     /note="Rhomboid family; pfam01694"
                     /db_xref="CDD:426384"
     CDS             1..364
                     /gene="RHBDD2"
                     /coded_by="XM_061153449.1:83..1177"
                     /db_xref="GeneID:133063731"
ORIGIN      
        1 mavsepgyrs wslwpevpsa tfftallsll vsgprlfllq qplapsglsl rsealrnwqv
       61 yrlvtyifvy enpvsllcga iviwrfagnf ertvgtvrhc fftvvfavic aiiflsfeav
      121 sslsklgeve dargftpvaf amlgvncvrs rmrralvfgm vvpsllvpwl llcaswlipq
      181 tsflsnvcgl giglaygfty cfsfdvpeqv amkldqkfpf slmrrismfk yisgssaerr
      241 aaqsrkpnpv pgsyptqsgh phltpnhpaa qmqhasgqkl aswpscapgh mpslppyqpa
      301 sglcyvqnhf gttpnssgvy pasagaslgv qppaplncpg tvysgalatp aatgskecsr
      361 vlmp
//
LOCUS       XP_061009433             223 aa            linear   MAM 02-DEC-2023
DEFINITION  rhomboid domain-containing protein 2 isoform X2 [Dama dama].
ACCESSION   XP_061009433
VERSION     XP_061009433.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153450.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..223
                     /product="rhomboid domain-containing protein 2 isoform X2"
                     /calculated_mol_wt=23653
     Region          <1..58
                     /region_name="Rhomboid"
                     /note="Rhomboid family; cl21536"
                     /db_xref="CDD:451297"
     CDS             1..223
                     /gene="RHBDD2"
                     /coded_by="XM_061153450.1:677..1348"
                     /db_xref="GeneID:133063731"
ORIGIN      
        1 mlgvncvrsr mrralvfgmv vpsllvpwll lcaswlipqt sflsnvcglg iglaygftyc
       61 fsfdvpeqva mkldqkfpfs lmrrismfky isgssaerra aqsrkpnpvp gsyptqsghp
      121 hltpnhpaaq mqhasgqkla swpscapghm pslppyqpas glcyvqnhfg ttpnssgvyp
      181 asagaslgvq ppaplncpgt vysgalatpa atgskecsrv lmp
//
LOCUS       XP_061009434             223 aa            linear   MAM 02-DEC-2023
DEFINITION  rhomboid domain-containing protein 2 isoform X2 [Dama dama].
ACCESSION   XP_061009434
VERSION     XP_061009434.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153451.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..223
                     /product="rhomboid domain-containing protein 2 isoform X2"
                     /calculated_mol_wt=23653
     Region          <1..58
                     /region_name="Rhomboid"
                     /note="Rhomboid family; cl21536"
                     /db_xref="CDD:451297"
     CDS             1..223
                     /gene="RHBDD2"
                     /coded_by="XM_061153451.1:579..1250"
                     /db_xref="GeneID:133063731"
ORIGIN      
        1 mlgvncvrsr mrralvfgmv vpsllvpwll lcaswlipqt sflsnvcglg iglaygftyc
       61 fsfdvpeqva mkldqkfpfs lmrrismfky isgssaerra aqsrkpnpvp gsyptqsghp
      121 hltpnhpaaq mqhasgqkla swpscapghm pslppyqpas glcyvqnhfg ttpnssgvyp
      181 asagaslgvq ppaplncpgt vysgalatpa atgskecsrv lmp
//
LOCUS       XP_061009435             223 aa            linear   MAM 02-DEC-2023
DEFINITION  rhomboid domain-containing protein 2 isoform X2 [Dama dama].
ACCESSION   XP_061009435
VERSION     XP_061009435.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153452.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..223
                     /product="rhomboid domain-containing protein 2 isoform X2"
                     /calculated_mol_wt=23653
     Region          <1..58
                     /region_name="Rhomboid"
                     /note="Rhomboid family; cl21536"
                     /db_xref="CDD:451297"
     CDS             1..223
                     /gene="RHBDD2"
                     /coded_by="XM_061153452.1:742..1413"
                     /db_xref="GeneID:133063731"
ORIGIN      
        1 mlgvncvrsr mrralvfgmv vpsllvpwll lcaswlipqt sflsnvcglg iglaygftyc
       61 fsfdvpeqva mkldqkfpfs lmrrismfky isgssaerra aqsrkpnpvp gsyptqsghp
      121 hltpnhpaaq mqhasgqkla swpscapghm pslppyqpas glcyvqnhfg ttpnssgvyp
      181 asagaslgvq ppaplncpgt vysgalatpa atgskecsrv lmp
//
LOCUS       XP_061009436             223 aa            linear   MAM 02-DEC-2023
DEFINITION  rhomboid domain-containing protein 2 isoform X2 [Dama dama].
ACCESSION   XP_061009436
VERSION     XP_061009436.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153453.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..223
                     /product="rhomboid domain-containing protein 2 isoform X2"
                     /calculated_mol_wt=23653
     Region          <1..58
                     /region_name="Rhomboid"
                     /note="Rhomboid family; cl21536"
                     /db_xref="CDD:451297"
     CDS             1..223
                     /gene="RHBDD2"
                     /coded_by="XM_061153453.1:673..1344"
                     /db_xref="GeneID:133063731"
ORIGIN      
        1 mlgvncvrsr mrralvfgmv vpsllvpwll lcaswlipqt sflsnvcglg iglaygftyc
       61 fsfdvpeqva mkldqkfpfs lmrrismfky isgssaerra aqsrkpnpvp gsyptqsghp
      121 hltpnhpaaq mqhasgqkla swpscapghm pslppyqpas glcyvqnhfg ttpnssgvyp
      181 asagaslgvq ppaplncpgt vysgalatpa atgskecsrv lmp
//
LOCUS       XP_061009437             223 aa            linear   MAM 02-DEC-2023
DEFINITION  rhomboid domain-containing protein 2 isoform X2 [Dama dama].
ACCESSION   XP_061009437
VERSION     XP_061009437.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153454.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..223
                     /product="rhomboid domain-containing protein 2 isoform X2"
                     /calculated_mol_wt=23653
     Region          <1..58
                     /region_name="Rhomboid"
                     /note="Rhomboid family; cl21536"
                     /db_xref="CDD:451297"
     CDS             1..223
                     /gene="RHBDD2"
                     /coded_by="XM_061153454.1:510..1181"
                     /db_xref="GeneID:133063731"
ORIGIN      
        1 mlgvncvrsr mrralvfgmv vpsllvpwll lcaswlipqt sflsnvcglg iglaygftyc
       61 fsfdvpeqva mkldqkfpfs lmrrismfky isgssaerra aqsrkpnpvp gsyptqsghp
      121 hltpnhpaaq mqhasgqkla swpscapghm pslppyqpas glcyvqnhfg ttpnssgvyp
      181 asagaslgvq ppaplncpgt vysgalatpa atgskecsrv lmp
//
LOCUS       XP_061009438             680 aa            linear   MAM 02-DEC-2023
DEFINITION  NADPH--cytochrome P450 reductase isoform X1 [Dama dama].
ACCESSION   XP_061009438
VERSION     XP_061009438.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153455.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..680
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..680
                     /product="NADPH--cytochrome P450 reductase isoform X1"
                     /calculated_mol_wt=76928
     Region          84..221
                     /region_name="Flavodoxin_1"
                     /note="pfam00258"
                     /db_xref="CDD:425562"
     Region          279..679
                     /region_name="CYPOR"
                     /note="NADPH cytochrome p450 reductase (CYPOR) serves as
                     an electron donor in several oxygenase systems and is a
                     component of nitric oxide synthases and methionine
                     synthase reductases. CYPOR transfers two electrons from
                     NADPH to the heme of cytochrome p450 via...; cd06204"
                     /db_xref="CDD:99801"
     Site            order(300,476,478,536..537,568..569,598..599,604,606,608,
                     634,638,641)
                     /site_type="other"
                     /note="NADP binding pocket [chemical binding]"
                     /db_xref="CDD:99801"
     Site            order(321,456..459,474..476,490..493,679)
                     /site_type="other"
                     /note="FAD binding pocket [chemical binding]"
                     /db_xref="CDD:99801"
     Site            order(456,458..459)
                     /site_type="other"
                     /note="FAD binding motif [chemical binding]"
                     /db_xref="CDD:99801"
     Site            order(459,632,677,679)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:99801"
     Site            order(490,493,496)
                     /site_type="other"
                     /note="phosphate binding motif [ion binding]"
                     /db_xref="CDD:99801"
     Site            order(532,536..539,541)
                     /site_type="other"
                     /note="beta-alpha-beta structure motif"
                     /db_xref="CDD:99801"
     CDS             1..680
                     /gene="LOC133063732"
                     /coded_by="XM_061153455.1:141..2183"
                     /db_xref="GeneID:133063732"
ORIGIN      
        1 mnmadsnmda gttvsetvae evslfsttdm ilfslivgvm tywflfrkkk eevpeftkiq
       61 tttssvkdrs fvekmkktgr niivfygsqt gtaeefanrl skdahrygmr gmaadpeeyd
      121 ladlsslpei ekalavfcma tygegdptdn aqdfydwlqe tdadlsgvky avfalgnkty
      181 ehfnamgkyv dkrleqlgaq rifdlglgdd dgnleedfit wreqfwpavc ehfgveatge
      241 essirqyelv vhadmdgakv ytgemgrlks yenqkppfda knpflavitt nrklnqgter
      301 hlmhleldis dskiryesgd hvavypands alvnqlgeil gadldvimsl nnldeesnkk
      361 hpfpcptsyr taltyyldit npprtnvlye laqyasepae qeqlrkmass svegkelylr
      421 wvlearrhil ailqdcpslr ppidhlcell prlqaryysi assskvhpns vhicavvvey
      481 etktgrinkg vatswlrake pagenggral vpmfvrksqf rlpfkattpv vmvgpgtgva
      541 pfigfiqera wlrqqgkevg etllyygcrr sdedylyree lagfhkdgtl tqlnvafsre
      601 qpqkvyvqhl lkkdkehlwk liheggahiy vcgdarnmar dvqntfydiv aeqgamehaq
      661 avdyvkklmt kgrysldvws
//
LOCUS       XP_061009439             680 aa            linear   MAM 02-DEC-2023
DEFINITION  NADPH--cytochrome P450 reductase isoform X1 [Dama dama].
ACCESSION   XP_061009439
VERSION     XP_061009439.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153456.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..680
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..680
                     /product="NADPH--cytochrome P450 reductase isoform X1"
                     /calculated_mol_wt=76928
     Region          84..221
                     /region_name="Flavodoxin_1"
                     /note="pfam00258"
                     /db_xref="CDD:425562"
     Region          279..679
                     /region_name="CYPOR"
                     /note="NADPH cytochrome p450 reductase (CYPOR) serves as
                     an electron donor in several oxygenase systems and is a
                     component of nitric oxide synthases and methionine
                     synthase reductases. CYPOR transfers two electrons from
                     NADPH to the heme of cytochrome p450 via...; cd06204"
                     /db_xref="CDD:99801"
     Site            order(300,476,478,536..537,568..569,598..599,604,606,608,
                     634,638,641)
                     /site_type="other"
                     /note="NADP binding pocket [chemical binding]"
                     /db_xref="CDD:99801"
     Site            order(321,456..459,474..476,490..493,679)
                     /site_type="other"
                     /note="FAD binding pocket [chemical binding]"
                     /db_xref="CDD:99801"
     Site            order(456,458..459)
                     /site_type="other"
                     /note="FAD binding motif [chemical binding]"
                     /db_xref="CDD:99801"
     Site            order(459,632,677,679)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:99801"
     Site            order(490,493,496)
                     /site_type="other"
                     /note="phosphate binding motif [ion binding]"
                     /db_xref="CDD:99801"
     Site            order(532,536..539,541)
                     /site_type="other"
                     /note="beta-alpha-beta structure motif"
                     /db_xref="CDD:99801"
     CDS             1..680
                     /gene="LOC133063732"
                     /coded_by="XM_061153456.1:28..2070"
                     /db_xref="GeneID:133063732"
ORIGIN      
        1 mnmadsnmda gttvsetvae evslfsttdm ilfslivgvm tywflfrkkk eevpeftkiq
       61 tttssvkdrs fvekmkktgr niivfygsqt gtaeefanrl skdahrygmr gmaadpeeyd
      121 ladlsslpei ekalavfcma tygegdptdn aqdfydwlqe tdadlsgvky avfalgnkty
      181 ehfnamgkyv dkrleqlgaq rifdlglgdd dgnleedfit wreqfwpavc ehfgveatge
      241 essirqyelv vhadmdgakv ytgemgrlks yenqkppfda knpflavitt nrklnqgter
      301 hlmhleldis dskiryesgd hvavypands alvnqlgeil gadldvimsl nnldeesnkk
      361 hpfpcptsyr taltyyldit npprtnvlye laqyasepae qeqlrkmass svegkelylr
      421 wvlearrhil ailqdcpslr ppidhlcell prlqaryysi assskvhpns vhicavvvey
      481 etktgrinkg vatswlrake pagenggral vpmfvrksqf rlpfkattpv vmvgpgtgva
      541 pfigfiqera wlrqqgkevg etllyygcrr sdedylyree lagfhkdgtl tqlnvafsre
      601 qpqkvyvqhl lkkdkehlwk liheggahiy vcgdarnmar dvqntfydiv aeqgamehaq
      661 avdyvkklmt kgrysldvws
//
LOCUS       XP_061009440             633 aa            linear   MAM 02-DEC-2023
DEFINITION  NADPH--cytochrome P450 reductase isoform X2 [Dama dama].
ACCESSION   XP_061009440
VERSION     XP_061009440.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153457.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..633
                     /product="NADPH--cytochrome P450 reductase isoform X2"
                     /calculated_mol_wt=71542
     Region          37..174
                     /region_name="Flavodoxin_1"
                     /note="pfam00258"
                     /db_xref="CDD:425562"
     Region          232..632
                     /region_name="CYPOR"
                     /note="NADPH cytochrome p450 reductase (CYPOR) serves as
                     an electron donor in several oxygenase systems and is a
                     component of nitric oxide synthases and methionine
                     synthase reductases. CYPOR transfers two electrons from
                     NADPH to the heme of cytochrome p450 via...; cd06204"
                     /db_xref="CDD:99801"
     Site            order(253,429,431,489..490,521..522,551..552,557,559,561,
                     587,591,594)
                     /site_type="other"
                     /note="NADP binding pocket [chemical binding]"
                     /db_xref="CDD:99801"
     Site            order(274,409..412,427..429,443..446,632)
                     /site_type="other"
                     /note="FAD binding pocket [chemical binding]"
                     /db_xref="CDD:99801"
     Site            order(409,411..412)
                     /site_type="other"
                     /note="FAD binding motif [chemical binding]"
                     /db_xref="CDD:99801"
     Site            order(412,585,630,632)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:99801"
     Site            order(443,446,449)
                     /site_type="other"
                     /note="phosphate binding motif [ion binding]"
                     /db_xref="CDD:99801"
     Site            order(485,489..492,494)
                     /site_type="other"
                     /note="beta-alpha-beta structure motif"
                     /db_xref="CDD:99801"
     CDS             1..633
                     /gene="LOC133063732"
                     /coded_by="XM_061153457.1:223..2124"
                     /db_xref="GeneID:133063732"
ORIGIN      
        1 mgcaysahqd epiprtssvk drsfvekmkk tgrniivfyg sqtgtaeefa nrlskdahry
       61 gmrgmaadpe eydladlssl peiekalavf cmatygegdp tdnaqdfydw lqetdadlsg
      121 vkyavfalgn ktyehfnamg kyvdkrleql gaqrifdlgl gdddgnleed fitwreqfwp
      181 avcehfgvea tgeessirqy elvvhadmdg akvytgemgr lksyenqkpp fdaknpflav
      241 ittnrklnqg terhlmhlel disdskirye sgdhvavypa ndsalvnqlg eilgadldvi
      301 mslnnldees nkkhpfpcpt syrtaltyyl ditnpprtnv lyelaqyase paeqeqlrkm
      361 asssvegkel ylrwvlearr hilailqdcp slrppidhlc ellprlqary ysiassskvh
      421 pnsvhicavv veyetktgri nkgvatswlr akepagengg ralvpmfvrk sqfrlpfkat
      481 tpvvmvgpgt gvapfigfiq erawlrqqgk evgetllyyg crrsdedyly reelagfhkd
      541 gtltqlnvaf sreqpqkvyv qhllkkdkeh lwklihegga hiyvcgdarn mardvqntfy
      601 divaeqgame haqavdyvkk lmtkgrysld vws
//
LOCUS       XP_061009442             343 aa            linear   MAM 02-DEC-2023
DEFINITION  ion channel TACAN [Dama dama].
ACCESSION   XP_061009442
VERSION     XP_061009442.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153459.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..343
                     /product="ion channel TACAN"
                     /calculated_mol_wt=40570
     Region          13..336
                     /region_name="TMPIT"
                     /note="TMPIT-like protein; pfam07851"
                     /db_xref="CDD:462288"
     CDS             1..343
                     /gene="TMEM120A"
                     /coded_by="XM_061153459.1:111..1142"
                     /db_xref="GeneID:133063733"
ORIGIN      
        1 mhppppgplg dclrdweelq qdfhgiqeth rlyrlkleel tklqnnctss itrqkkrlqe
       61 lalvlkkckp slpseaeeaa qelenqiker qglffdmeay lpkknglyls lvlgnvnvtl
      121 lskqakfayk deyekfklyl tiililisft crfllnsrvt daafnfllvw yyctltires
      181 ilinngsrik gwwvfhhyvs tflsgvmltw pdglmyqkfr nqflsfsmyq sfvqflqyyy
      241 qsgclyrlra lgerhtmdlt vegfqswmwr gltfllpflf fghfwqlfna ltlfnlardp
      301 eckewqvlmc gfpflllflg nffttlrvvh qkfhnqlhgs kke
//
LOCUS       XP_061009443             338 aa            linear   MAM 02-DEC-2023
DEFINITION  malate dehydrogenase, mitochondrial [Dama dama].
ACCESSION   XP_061009443
VERSION     XP_061009443.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153460.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..338
                     /product="malate dehydrogenase, mitochondrial"
                     /calculated_mol_wt=35537
     Region          26..334
                     /region_name="MDH_glyoxysomal_mitochondrial"
                     /note="Glyoxysomal and mitochondrial malate
                     dehydrogenases; cd01337"
                     /db_xref="CDD:133422"
     Site            order(33..36,57,99,101..102,113,117,120,140,142,169,172,
                     200,247,251)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:133422"
     Site            order(38,66..67,69..71,175..176,179,233,236,240..241,
                     247..250,253)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:133422"
     Site            order(104,110,142,176,200,234)
                     /site_type="other"
                     /note="Substrate binding site [chemical binding]"
                     /db_xref="CDD:133422"
     CDS             1..338
                     /gene="MDH2"
                     /coded_by="XM_061153460.1:121..1137"
                     /db_xref="GeneID:133063734"
ORIGIN      
        1 mlsalarpag aalrrsfsts aqnnakvavl gasggigqpl slllknsplv srltlydiah
       61 tpgvaadlsh ietratvkgy lgpeqlpdcl kgcdvvvipa gvprkpgmtr ddlfntnati
      121 vatltaacaq hcpeamicii snpvnstipi taevfkkhgv ynpnkifgvt tldivranaf
      181 vaelkdldpa rvnvpviggh agktiiplis qctpkvefpq dqlttltgri qeagtevvka
      241 kagagsatls mayagarfvf slvdamngke gvvecsfvks qetdcpyfst plllgkkgie
      301 knlgigkvsp feekmiaeai pelkasikkg eefvknmk
//
LOCUS       XP_061009444             314 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine/tyrosine-interacting-like protein 1 isoform X1
            [Dama dama].
ACCESSION   XP_061009444
VERSION     XP_061009444.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153461.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..314
                     /product="serine/threonine/tyrosine-interacting-like
                     protein 1 isoform X1"
                     /calculated_mol_wt=35835
     Region          33..139
                     /region_name="RHOD"
                     /note="Rhodanese Homology Domain (RHOD); an alpha beta
                     fold domain found duplicated in the rhodanese protein. The
                     cysteine containing enzymatically active version of the
                     domain is also found in the Cdc25 class of protein
                     phosphatases and a variety of proteins...; cl00125"
                     /db_xref="CDD:444705"
     Site            90
                     /site_type="active"
                     /note="active site residue [active]"
                     /db_xref="CDD:238651"
     Region          151..304
                     /region_name="DSP_STYXL1"
                     /note="dual specificity phosphatase-like domain of
                     serine/threonine/tyrosine interacting like 1; cd14517"
                     /db_xref="CDD:350367"
     CDS             1..314
                     /gene="STYXL1"
                     /coded_by="XM_061153461.1:156..1100"
                     /db_xref="GeneID:133063735"
ORIGIN      
        1 mtglvlcept elynilnqvt klsrltepny lclldvrskr eydeshvita llvkkragky
       61 lipesvdlec veycvvydns tislelmlkd essdddnadd gkhrivlgaa vecgrtlthl
      121 trhpililrg gyehfsaryh ffrtqkiiwm pqeldafqpy pieimpgriy lgnfkqacdp
      181 kiqkdlkina hvnismetgp ffvgdadrll hiqiedslea sitpflrllc hfidihleln
      241 svilvfstlg isrscaaila ylmhrngqtl krswaylkkc knnmrpnral vaqlsewekv
      301 vlgdivtdiq nppy
//
LOCUS       XP_061009445             314 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine/tyrosine-interacting-like protein 1 isoform X1
            [Dama dama].
ACCESSION   XP_061009445
VERSION     XP_061009445.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153462.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..314
                     /product="serine/threonine/tyrosine-interacting-like
                     protein 1 isoform X1"
                     /calculated_mol_wt=35835
     Region          33..139
                     /region_name="RHOD"
                     /note="Rhodanese Homology Domain (RHOD); an alpha beta
                     fold domain found duplicated in the rhodanese protein. The
                     cysteine containing enzymatically active version of the
                     domain is also found in the Cdc25 class of protein
                     phosphatases and a variety of proteins...; cl00125"
                     /db_xref="CDD:444705"
     Site            90
                     /site_type="active"
                     /note="active site residue [active]"
                     /db_xref="CDD:238651"
     Region          151..304
                     /region_name="DSP_STYXL1"
                     /note="dual specificity phosphatase-like domain of
                     serine/threonine/tyrosine interacting like 1; cd14517"
                     /db_xref="CDD:350367"
     CDS             1..314
                     /gene="STYXL1"
                     /coded_by="XM_061153462.1:158..1102"
                     /db_xref="GeneID:133063735"
ORIGIN      
        1 mtglvlcept elynilnqvt klsrltepny lclldvrskr eydeshvita llvkkragky
       61 lipesvdlec veycvvydns tislelmlkd essdddnadd gkhrivlgaa vecgrtlthl
      121 trhpililrg gyehfsaryh ffrtqkiiwm pqeldafqpy pieimpgriy lgnfkqacdp
      181 kiqkdlkina hvnismetgp ffvgdadrll hiqiedslea sitpflrllc hfidihleln
      241 svilvfstlg isrscaaila ylmhrngqtl krswaylkkc knnmrpnral vaqlsewekv
      301 vlgdivtdiq nppy
//
LOCUS       XP_061009446             314 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine/tyrosine-interacting-like protein 1 isoform X1
            [Dama dama].
ACCESSION   XP_061009446
VERSION     XP_061009446.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153463.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..314
                     /product="serine/threonine/tyrosine-interacting-like
                     protein 1 isoform X1"
                     /calculated_mol_wt=35835
     Region          33..139
                     /region_name="RHOD"
                     /note="Rhodanese Homology Domain (RHOD); an alpha beta
                     fold domain found duplicated in the rhodanese protein. The
                     cysteine containing enzymatically active version of the
                     domain is also found in the Cdc25 class of protein
                     phosphatases and a variety of proteins...; cl00125"
                     /db_xref="CDD:444705"
     Site            90
                     /site_type="active"
                     /note="active site residue [active]"
                     /db_xref="CDD:238651"
     Region          151..304
                     /region_name="DSP_STYXL1"
                     /note="dual specificity phosphatase-like domain of
                     serine/threonine/tyrosine interacting like 1; cd14517"
                     /db_xref="CDD:350367"
     CDS             1..314
                     /gene="STYXL1"
                     /coded_by="XM_061153463.1:31..975"
                     /db_xref="GeneID:133063735"
ORIGIN      
        1 mtglvlcept elynilnqvt klsrltepny lclldvrskr eydeshvita llvkkragky
       61 lipesvdlec veycvvydns tislelmlkd essdddnadd gkhrivlgaa vecgrtlthl
      121 trhpililrg gyehfsaryh ffrtqkiiwm pqeldafqpy pieimpgriy lgnfkqacdp
      181 kiqkdlkina hvnismetgp ffvgdadrll hiqiedslea sitpflrllc hfidihleln
      241 svilvfstlg isrscaaila ylmhrngqtl krswaylkkc knnmrpnral vaqlsewekv
      301 vlgdivtdiq nppy
//
LOCUS       XP_061009447             314 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine/tyrosine-interacting-like protein 1 isoform X1
            [Dama dama].
ACCESSION   XP_061009447
VERSION     XP_061009447.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153464.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..314
                     /product="serine/threonine/tyrosine-interacting-like
                     protein 1 isoform X1"
                     /calculated_mol_wt=35835
     Region          33..139
                     /region_name="RHOD"
                     /note="Rhodanese Homology Domain (RHOD); an alpha beta
                     fold domain found duplicated in the rhodanese protein. The
                     cysteine containing enzymatically active version of the
                     domain is also found in the Cdc25 class of protein
                     phosphatases and a variety of proteins...; cl00125"
                     /db_xref="CDD:444705"
     Site            90
                     /site_type="active"
                     /note="active site residue [active]"
                     /db_xref="CDD:238651"
     Region          151..304
                     /region_name="DSP_STYXL1"
                     /note="dual specificity phosphatase-like domain of
                     serine/threonine/tyrosine interacting like 1; cd14517"
                     /db_xref="CDD:350367"
     CDS             1..314
                     /gene="STYXL1"
                     /coded_by="XM_061153464.1:1851..2795"
                     /db_xref="GeneID:133063735"
ORIGIN      
        1 mtglvlcept elynilnqvt klsrltepny lclldvrskr eydeshvita llvkkragky
       61 lipesvdlec veycvvydns tislelmlkd essdddnadd gkhrivlgaa vecgrtlthl
      121 trhpililrg gyehfsaryh ffrtqkiiwm pqeldafqpy pieimpgriy lgnfkqacdp
      181 kiqkdlkina hvnismetgp ffvgdadrll hiqiedslea sitpflrllc hfidihleln
      241 svilvfstlg isrscaaila ylmhrngqtl krswaylkkc knnmrpnral vaqlsewekv
      301 vlgdivtdiq nppy
//
LOCUS       XP_061009448             314 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine/tyrosine-interacting-like protein 1 isoform X1
            [Dama dama].
ACCESSION   XP_061009448
VERSION     XP_061009448.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153465.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..314
                     /product="serine/threonine/tyrosine-interacting-like
                     protein 1 isoform X1"
                     /calculated_mol_wt=35835
     Region          33..139
                     /region_name="RHOD"
                     /note="Rhodanese Homology Domain (RHOD); an alpha beta
                     fold domain found duplicated in the rhodanese protein. The
                     cysteine containing enzymatically active version of the
                     domain is also found in the Cdc25 class of protein
                     phosphatases and a variety of proteins...; cl00125"
                     /db_xref="CDD:444705"
     Site            90
                     /site_type="active"
                     /note="active site residue [active]"
                     /db_xref="CDD:238651"
     Region          151..304
                     /region_name="DSP_STYXL1"
                     /note="dual specificity phosphatase-like domain of
                     serine/threonine/tyrosine interacting like 1; cd14517"
                     /db_xref="CDD:350367"
     CDS             1..314
                     /gene="STYXL1"
                     /coded_by="XM_061153465.1:21..965"
                     /db_xref="GeneID:133063735"
ORIGIN      
        1 mtglvlcept elynilnqvt klsrltepny lclldvrskr eydeshvita llvkkragky
       61 lipesvdlec veycvvydns tislelmlkd essdddnadd gkhrivlgaa vecgrtlthl
      121 trhpililrg gyehfsaryh ffrtqkiiwm pqeldafqpy pieimpgriy lgnfkqacdp
      181 kiqkdlkina hvnismetgp ffvgdadrll hiqiedslea sitpflrllc hfidihleln
      241 svilvfstlg isrscaaila ylmhrngqtl krswaylkkc knnmrpnral vaqlsewekv
      301 vlgdivtdiq nppy
//
LOCUS       XP_061009449             281 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine/tyrosine-interacting-like protein 1 isoform X2
            [Dama dama].
ACCESSION   XP_061009449
VERSION     XP_061009449.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153466.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..281
                     /product="serine/threonine/tyrosine-interacting-like
                     protein 1 isoform X2"
                     /calculated_mol_wt=31979
     Region          33..139
                     /region_name="RHOD"
                     /note="Rhodanese Homology Domain (RHOD); an alpha beta
                     fold domain found duplicated in the rhodanese protein. The
                     cysteine containing enzymatically active version of the
                     domain is also found in the Cdc25 class of protein
                     phosphatases and a variety of proteins...; cl00125"
                     /db_xref="CDD:444705"
     Site            90
                     /site_type="active"
                     /note="active site residue [active]"
                     /db_xref="CDD:238651"
     Region          151..>271
                     /region_name="PTP_DSP_cys"
                     /note="cys-based protein tyrosine phosphatase and
                     dual-specificity phosphatase superfamily; cl28904"
                     /db_xref="CDD:475123"
     CDS             1..281
                     /gene="STYXL1"
                     /coded_by="XM_061153466.1:155..1000"
                     /db_xref="GeneID:133063735"
ORIGIN      
        1 mtglvlcept elynilnqvt klsrltepny lclldvrskr eydeshvita llvkkragky
       61 lipesvdlec veycvvydns tislelmlkd essdddnadd gkhrivlgaa vecgrtlthl
      121 trhpililrg gyehfsaryh ffrtqkiiwm pqeldafqpy pieimpgriy lgnfkqacdp
      181 kiqkdlkina hvnismetgp ffvgdadrll hiqiedslea sitpflrllc hfidihleln
      241 svilvfstlg isrscaaila ylmhrngqtl klvlhpvqhf t
//
LOCUS       XP_061009451             201 aa            linear   MAM 02-DEC-2023
DEFINITION  heat shock protein beta-1 [Dama dama].
ACCESSION   XP_061009451
VERSION     XP_061009451.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153468.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..201
                     /product="heat shock protein beta-1"
                     /calculated_mol_wt=22188
     Region          80..165
                     /region_name="ACD_HspB1_like"
                     /note="Alpha crystallin domain (ACD) found in mammalian
                     small (s)heat shock protein (Hsp)-27 (also denoted HspB1
                     in human) and similar proteins. sHsps are molecular
                     chaperones that suppress protein aggregation and protect
                     against cell stress, and are generally...; cd06475"
                     /db_xref="CDD:107230"
     Site            order(80..84,94,96,98..99,136,157..158)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:107230"
     CDS             1..201
                     /gene="HSPB1"
                     /coded_by="XM_061153468.1:147..752"
                     /db_xref="GeneID:133063737"
ORIGIN      
        1 maerrvpfsl lrgpswdpfr dwypahsrlf dqafglprlp eewsqwlshs gwpgyvralp
       61 aaaiegpayn ralsrqlssg vseiqqtadr wrvsldvnhf apeeltvktk dgvveitgkh
      121 eerqdehgfi srcftrkytl ppgvdptlvs sslspegtlt veaplpksat qsaeitipvt
      181 fqaraqlggp eagkseqpan k
//
LOCUS       XP_061009452             247 aa            linear   MAM 02-DEC-2023
DEFINITION  14-3-3 protein gamma [Dama dama].
ACCESSION   XP_061009452
VERSION     XP_061009452.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153469.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..247
                     /product="14-3-3 protein gamma"
                     /calculated_mol_wt=28172
     Region          2..247
                     /region_name="14-3-3_gamma"
                     /note="14-3-3 gamma, an isoform of 14-3-3 protein;
                     cd10024"
                     /db_xref="CDD:206760"
     Site            order(6,9..10,13..14,16..17,19,22,59,62..63,66,77..78,
                     81..82,85,88..89,92)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206760"
     Site            order(50,57,125,132..133,177..178,181,222,225,229,
                     232..233)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:206760"
     CDS             1..247
                     /gene="YWHAG"
                     /coded_by="XM_061153469.1:201..944"
                     /db_xref="GeneID:133063738"
ORIGIN      
        1 mvdreqlvqk arlaeqaery ddmaaamknv telneplsne ernllsvayk nvvgarrssw
       61 rvissieqkt sadgnekkie mvrayrekie keleavcqdv lslldnylik ncsetqyesk
      121 vfylkmkgdy yrylaevatg ekratvvess ekayseahei skehmqpthp irlglalnys
      181 vfyyeiqnap eqachlakta fddaiaeldt lnedsykdst limqllrdnl tlwtsdqqdd
      241 dggegnn
//
LOCUS       XP_061009453             619 aa            linear   MAM 02-DEC-2023
DEFINITION  probable E3 ubiquitin-protein ligase DTX2 isoform X1 [Dama dama].
ACCESSION   XP_061009453
VERSION     XP_061009453.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153470.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..619
                     /product="probable E3 ubiquitin-protein ligase DTX2
                     isoform X1"
                     /calculated_mol_wt=66907
     Region          21..105
                     /region_name="WWE"
                     /note="Domain in Deltex and TRIP12 homologues. Possibly
                     involved in regulation of ubiquitin-mediated proteolysis;
                     smart00678"
                     /db_xref="CDD:128922"
     Region          110..181
                     /region_name="WWE"
                     /note="Domain in Deltex and TRIP12 homologues. Possibly
                     involved in regulation of ubiquitin-mediated proteolysis;
                     smart00678"
                     /db_xref="CDD:128922"
     Region          <173..390
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          408..479
                     /region_name="RING-H2_DTX2"
                     /note="RING finger, H2 subclass, found in E3
                     ubiquitin-protein ligase Deltex2 (DTX2) and similar
                     proteins; cd16672"
                     /db_xref="CDD:438334"
     Region          477..611
                     /region_name="DTC"
                     /note="Deltex C-terminal domain; pfam18102"
                     /db_xref="CDD:465650"
     Site            order(486..490,492,504,506,508..510,531..533,535,569,
                     582..583,591)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:193607"
     CDS             1..619
                     /gene="DTX2"
                     /coded_by="XM_061153470.1:231..2090"
                     /db_xref="GeneID:133063739"
ORIGIN      
        1 mamapspsla qvyaspvava vwewqdglgt whpysaavcs yieqqfvqqk gqrfglgsla
       61 hsiplgqadp slapyiidlp swtqfrqdtg tmravrrhlf pqhsapgrgv vwewlgddns
      121 wtayeasvcd yleqqvargn qlvdlaplgy nytinyatht qtnktsnfcr svrrqagppy
      181 pvttiiappg htgvacschq clsggttgpv sgryrhsmts lpaypvpqpp hrtalvwgah
      241 qafapynkps lsgarsaprl nttnpwagap sslgnpplyr sslshlasqh qpsglsatst
      301 asaslpsgsa ssprsvpatv pvqmpkpsrv qqalagmtsi lmsaiglpvc lsrapqpasp
      361 pasclasksh ssvkrlrkms mkggspkpep eqvirnytee lktapeedci icmeklsvvs
      421 gysdvtdskt igpmavgrla rcshtfhllc llamycngnk dgslqcpsck tiygektgtq
      481 prgkmevftf qmslpghedc gtilivynip hgiqgpehpn pgkpftargf prqcylpdna
      541 qgrkvlellk vawkrrlift vgtssttget dtvvwneihh ktemdrnvtg hgypdpnylq
      601 nvlaelaaqg vtedcleqq
//
LOCUS       XP_061009454             572 aa            linear   MAM 02-DEC-2023
DEFINITION  probable E3 ubiquitin-protein ligase DTX2 isoform X2 [Dama dama].
ACCESSION   XP_061009454
VERSION     XP_061009454.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153471.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..572
                     /product="probable E3 ubiquitin-protein ligase DTX2
                     isoform X2"
                     /calculated_mol_wt=62012
     Region          21..105
                     /region_name="WWE"
                     /note="Domain in Deltex and TRIP12 homologues. Possibly
                     involved in regulation of ubiquitin-mediated proteolysis;
                     smart00678"
                     /db_xref="CDD:128922"
     Region          110..181
                     /region_name="WWE"
                     /note="Domain in Deltex and TRIP12 homologues. Possibly
                     involved in regulation of ubiquitin-mediated proteolysis;
                     smart00678"
                     /db_xref="CDD:128922"
     Region          <173..344
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          361..432
                     /region_name="RING-H2_DTX2"
                     /note="RING finger, H2 subclass, found in E3
                     ubiquitin-protein ligase Deltex2 (DTX2) and similar
                     proteins; cd16672"
                     /db_xref="CDD:438334"
     Region          430..564
                     /region_name="DTC"
                     /note="Deltex C-terminal domain; pfam18102"
                     /db_xref="CDD:465650"
     Site            order(439..443,445,457,459,461..463,484..486,488,522,
                     535..536,544)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:193607"
     CDS             1..572
                     /gene="DTX2"
                     /coded_by="XM_061153471.1:231..1949"
                     /db_xref="GeneID:133063739"
ORIGIN      
        1 mamapspsla qvyaspvava vwewqdglgt whpysaavcs yieqqfvqqk gqrfglgsla
       61 hsiplgqadp slapyiidlp swtqfrqdtg tmravrrhlf pqhsapgrgv vwewlgddns
      121 wtayeasvcd yleqqvargn qlvdlaplgy nytinyatht qtnktsnfcr svrrqagppy
      181 pvttiiappg htgvacschq clsggttgpv sgryrhsmts lpaypvpqpp hrtalvwgah
      241 qafapynkps lsgarsaprl nttnpwagap sslgnpplyr sslshlasqh qpsglsatst
      301 asaslpsgsa ssprsvpatv pvqmpkpsrv qqalaggspk pepeqvirny teelktapee
      361 dciicmekls vvsgysdvtd sktigpmavg rlarcshtfh llcllamycn gnkdgslqcp
      421 scktiygekt gtqprgkmev ftfqmslpgh edcgtilivy niphgiqgpe hpnpgkpfta
      481 rgfprqcylp dnaqgrkvle llkvawkrrl iftvgtsstt getdtvvwne ihhktemdrn
      541 vtghgypdpn ylqnvlaela aqgvtedcle qq
//
LOCUS       XP_061009455             801 aa            linear   MAM 02-DEC-2023
DEFINITION  ras GTPase-activating protein 4B isoform X1 [Dama dama].
ACCESSION   XP_061009455
VERSION     XP_061009455.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153472.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..801
                     /product="ras GTPase-activating protein 4B isoform X1"
                     /calculated_mol_wt=90022
     Region          6..126
                     /region_name="C2A_Rasal1_RasA4"
                     /note="C2 domain first repeat present in RasA1 and RasA4;
                     cd04054"
                     /db_xref="CDD:176018"
     Site            order(21,27,74,76,82)
                     /site_type="other"
                     /note="Ca2+ binding pocket [ion binding]"
                     /db_xref="CDD:176018"
     Region          133..255
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     Region          263..548
                     /region_name="RasGAP_RASA4"
                     /note="Ras-GTPase Activating Domain of RASA4; cd05395"
                     /db_xref="CDD:213343"
     Site            order(301,337,339,341..342,344,347,351,462,470..471,
                     474..475,478,499,502..503,506,510,512,519..520)
                     /site_type="other"
                     /note="putative RAS interface [polypeptide binding]"
                     /db_xref="CDD:213343"
     Region          540..679
                     /region_name="PH_CAPRI"
                     /note="Ca2+ promoted Ras inactivator pleckstrin homology
                     (PH) domain; cd13372"
                     /db_xref="CDD:241523"
     Region          679..708
                     /region_name="BTK"
                     /note="BTK motif; pfam00779"
                     /db_xref="CDD:459937"
     CDS             1..801
                     /gene="RASA4B"
                     /coded_by="XM_061153472.1:122..2527"
                     /db_xref="GeneID:133063740"
ORIGIN      
        1 makrsslsir ivegknlpak ditgssdpyc ivkvdnepii rtatvwktlc pfwgeeyqvh
       61 lpptfhsvaf yvmdedalsr ddvigkvclt rdtlaahpkg fsgwahltev dpdeevqgei
      121 hlrlevvpgt rarlrcsvle ardlapkdrn gasdpfvrvr yngrtqetsi vkkscyprwn
      181 etfefeleeg aaealcveaw dwdlvsrndf lgkvmfnvqr lwaaqreegw frlqpdqsks
      241 rreeghvgsl qlevrlrdet vlpsgcyqpl vqllcrevkl gtqspgqlis lieemtstey
      301 rqevattllk lflgqglakd fldllfqlel srtseantlf rsnslasksm esflkvagmr
      361 ylhgvlgpii dsvfeekkyv eldpskvevk dvgcsglhrp qteaevleqs aqtlrahlga
      421 llsalsrsvr acpavvratf rqlfrrvrer fpsaqdenvp fiavtsflcl rfispailap
      481 klfhlrerha dartsrtlll lakavqnvgn mdtpasrake awmeplqpmv rqgvaqlkdf
      541 itklvdiqek deldlqrtls lqappvkegp lfihrtkskg plmsssfkkl hfsltteals
      601 faktpsskks tliklanira vekveeksfg sshvmqviyt ddagrlqtay lqckcvneln
      661 qwlsalrkvc inntgllgsy hpgvfrgdkw scchqrdktd lgcdktrswv tlqewndpld
      721 hdleaqliyr hllgveatlr ekhrqlsvgp eagrgptgpg eapedplael lqvlrdlqea
      781 hrsspagspp sepsrvlelq t
//
LOCUS       XP_061009456             729 aa            linear   MAM 02-DEC-2023
DEFINITION  ras GTPase-activating protein 4B isoform X2 [Dama dama].
ACCESSION   XP_061009456
VERSION     XP_061009456.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153473.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..729
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..729
                     /product="ras GTPase-activating protein 4B isoform X2"
                     /calculated_mol_wt=81888
     Region          <1..54
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     Region          61..183
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     Region          191..476
                     /region_name="RasGAP_RASA4"
                     /note="Ras-GTPase Activating Domain of RASA4; cd05395"
                     /db_xref="CDD:213343"
     Site            order(229,265,267,269..270,272,275,279,390,398..399,
                     402..403,406,427,430..431,434,438,440,447..448)
                     /site_type="other"
                     /note="putative RAS interface [polypeptide binding]"
                     /db_xref="CDD:213343"
     Region          468..607
                     /region_name="PH_CAPRI"
                     /note="Ca2+ promoted Ras inactivator pleckstrin homology
                     (PH) domain; cd13372"
                     /db_xref="CDD:241523"
     Region          607..636
                     /region_name="BTK"
                     /note="BTK motif; pfam00779"
                     /db_xref="CDD:459937"
     CDS             1..729
                     /gene="RASA4B"
                     /coded_by="XM_061153473.1:452..2641"
                     /db_xref="GeneID:133063740"
ORIGIN      
        1 mdedalsrdd vigkvcltrd tlaahpkgfs gwahltevdp deevqgeihl rlevvpgtra
       61 rlrcsvlear dlapkdrnga sdpfvrvryn grtqetsivk kscyprwnet fefeleegaa
      121 ealcveawdw dlvsrndflg kvmfnvqrlw aaqreegwfr lqpdqsksrr eeghvgslql
      181 evrlrdetvl psgcyqplvq llcrevklgt qspgqlisli eemtsteyrq evattllklf
      241 lgqglakdfl dllfqlelsr tseantlfrs nslasksmes flkvagmryl hgvlgpiids
      301 vfeekkyvel dpskvevkdv gcsglhrpqt eaevleqsaq tlrahlgall salsrsvrac
      361 pavvratfrq lfrrvrerfp saqdenvpfi avtsflclrf ispailapkl fhlrerhada
      421 rtsrtlllla kavqnvgnmd tpasrakeaw meplqpmvrq gvaqlkdfit klvdiqekde
      481 ldlqrtlslq appvkegplf ihrtkskgpl msssfkklhf slttealsfa ktpsskkstl
      541 iklanirave kveeksfgss hvmqviytdd agrlqtaylq ckcvnelnqw lsalrkvcin
      601 ntgllgsyhp gvfrgdkwsc chqrdktdlg cdktrswvtl qewndpldhd leaqliyrhl
      661 lgveatlrek hrqlsvgpea grgptgpgea pedplaellq vlrdlqeahr sspagsppse
      721 psrvlelqt
//
LOCUS       XP_061009457             680 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat and WD repeat-containing protein 1 isoform X1
            [Dama dama].
ACCESSION   XP_061009457
VERSION     XP_061009457.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153474.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..680
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..680
                     /product="leucine-rich repeat and WD repeat-containing
                     protein 1 isoform X1"
                     /calculated_mol_wt=74178
     Region          <53..>157
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          57..82
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          83..104
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          105..126
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          127..140
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          <342..614
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          426..471
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          479..523
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          531..579
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          587..628
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          646..675
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..680
                     /gene="LRWD1"
                     /coded_by="XM_061153474.1:37..2079"
                     /db_xref="GeneID:133063741"
ORIGIN      
        1 mdsrgatswt eadagacigy accaavargp rllamaplst rlliqrgrpk sdrlgkirsl
       61 dlsglnllse dldpkllsrl kqlqeldlsd nqletlpadl glphlqvlhc annqlsdvtp
      121 lcqfrqleel slegnpfltv sdslkvtfll pelrkfngkd asttrskaen lnrelttrva
      181 ahwkkfvaal spekqaeaqa dfvksavrsv rygplslsef tqwrvqmise elvasggtht
      241 headtpegrh katatqepra rpvalrrpgd tplslspekr vctsplgpve gslvgsdsgq
      301 leplhflqch sknnspsdlk tqlwacafep awdegqagat cqtvatcgge avcvidcqtg
      361 lvlhkykvpg eeffsvawta ltvvtqaghk krwnvlaaag lrglvrllhv qagfccglir
      421 ghkkaiatlc fspthethlf tasydkriil wdigtpnqdy efqasqlltl dttstplrlc
      481 pvapcpdayl lagceggccc wdvrldqpqk rrvcevefvf sedseasgqr vdglafvned
      541 vvaskgsgpg ticlwswsqt wqgrgsqptv avvvlarlqw sptilayfsl stcpdkglvl
      601 cgdeqgsvwi ydvrpllaqc sppqatvqap tqilkwpqpq algqmvtktm vntvvanptf
      661 tyltaltdsn ivaiwrrrep
//
LOCUS       XP_061009458             634 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat and WD repeat-containing protein 1 isoform X2
            [Dama dama].
ACCESSION   XP_061009458
VERSION     XP_061009458.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153475.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..634
                     /product="leucine-rich repeat and WD repeat-containing
                     protein 1 isoform X2"
                     /calculated_mol_wt=69004
     Region          <53..>157
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          57..82
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          83..104
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          105..126
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          127..140
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          <296..568
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          380..425
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          433..477
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          485..533
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          541..582
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          600..629
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..634
                     /gene="LRWD1"
                     /coded_by="XM_061153475.1:37..1941"
                     /db_xref="GeneID:133063741"
ORIGIN      
        1 mdsrgatswt eadagacigy accaavargp rllamaplst rlliqrgrpk sdrlgkirsl
       61 dlsglnllse dldpkllsrl kqlqeldlsd nqletlpadl glphlqvlhc annqlsdvtp
      121 lcqfrqleel slegnpfltv sdslkvtfll pelrkfngkd asttrskaen lnrelttrvq
      181 miseelvasg gththeadtp egrhkatatq eprarpvalr rpgdtplsls pekrvctspl
      241 gpvegslvgs dsgqleplhf lqchsknnsp sdlktqlwac afepawdegq agatcqtvat
      301 cggeavcvid cqtglvlhky kvpgeeffsv awtaltvvtq aghkkrwnvl aaaglrglvr
      361 llhvqagfcc glirghkkai atlcfspthe thlftasydk riilwdigtp nqdyefqasq
      421 lltldttstp lrlcpvapcp dayllagceg gcccwdvrld qpqkrrvcev efvfsedsea
      481 sgqrvdglaf vnedvvaskg sgpgticlws wsqtwqgrgs qptvavvvla rlqwsptila
      541 yfslstcpdk glvlcgdeqg svwiydvrpl laqcsppqat vqaptqilkw pqpqalgqmv
      601 tktmvntvva nptftyltal tdsnivaiwr rrep
//
LOCUS       XP_061009460             117 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA-directed RNA polymerase II subunit RPB11-a [Dama dama].
ACCESSION   XP_061009460
VERSION     XP_061009460.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153477.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..117
                     /product="DNA-directed RNA polymerase II subunit RPB11-a"
                     /calculated_mol_wt=13162
     Region          14..105
                     /region_name="RNAP_II_RPB11"
                     /note="RPB11 subunit of Eukaryotic RNA polymerase II;
                     cd06926"
                     /db_xref="CDD:132902"
     Site            order(19,21,35,39,41..42,44,49,52,91..92,97..99,101..105)
                     /site_type="other"
                     /note="RPB11 - RPB3 heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:132902"
     Site            order(26,47,58,60..62,64..67)
                     /site_type="other"
                     /note="RPB11 - RPB1 interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:132902"
     Site            order(40,65..66)
                     /site_type="other"
                     /note="RPB11 - RPB2 interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:132902"
     Site            57
                     /site_type="other"
                     /note="RPB11 - RPB8 interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:132902"
     CDS             1..117
                     /gene="POLR2J"
                     /coded_by="XM_061153477.1:82..435"
                     /db_xref="GeneID:133063742"
ORIGIN      
        1 mnappafesf llfegekkit inkdtkvpna clftinkedh tlgniiksql lkdpqvlfag
       61 ykvphplehk iiirvqttpd yspqeaftna itdliselsl leerfrvaik dkqegie
//
LOCUS       XP_061009461             313 aa            linear   MAM 02-DEC-2023
DEFINITION  protein orai-2 isoform X1 [Dama dama].
ACCESSION   XP_061009461
VERSION     XP_061009461.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153478.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..313
                     /product="protein orai-2 isoform X1"
                     /calculated_mol_wt=34857
     Region          106..287
                     /region_name="Orai-1"
                     /note="Mediator of CRAC channel activity; pfam07856"
                     /db_xref="CDD:462291"
     CDS             1..313
                     /gene="ORAI2"
                     /coded_by="XM_061153478.1:125..1066"
                     /db_xref="GeneID:133063743"
ORIGIN      
        1 mhflkrpflf eclgyktgef tvpserfpaa wngssqrhcg nfspsalptk haalglaptm
       61 saelnvpvdp sapacsepgh kgmdyrdwvr rsylelvtsn hhsvqalswr klylsraklk
      121 assrtsalls gfamvamvev qletqyqypr plliafsact tvlvavhlfa llistcilpn
      181 veavsnihnl nsisespher mhpyielawg fstvlgillf laevvllcwi kflpvdarhq
      241 pgpppgpagh tgwqaalvst iimvpvglif vvftihfyrs lvrhkterhn reieelhklk
      301 vqldghersl qvv
//
LOCUS       XP_061009462             254 aa            linear   MAM 02-DEC-2023
DEFINITION  protein orai-2 isoform X2 [Dama dama].
ACCESSION   XP_061009462
VERSION     XP_061009462.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153479.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..254
                     /product="protein orai-2 isoform X2"
                     /calculated_mol_wt=28366
     Region          47..228
                     /region_name="Orai-1"
                     /note="Mediator of CRAC channel activity; pfam07856"
                     /db_xref="CDD:462291"
     CDS             1..254
                     /gene="ORAI2"
                     /coded_by="XM_061153479.1:142..906"
                     /db_xref="GeneID:133063743"
ORIGIN      
        1 msaelnvpvd psapacsepg hkgmdyrdwv rrsylelvts nhhsvqalsw rklylsrakl
       61 kassrtsall sgfamvamve vqletqyqyp rplliafsac ttvlvavhlf allistcilp
      121 nveavsnihn lnsisesphe rmhpyielaw gfstvlgill flaevvllcw ikflpvdarh
      181 qpgpppgpag htgwqaalvs tiimvpvgli fvvftihfyr slvrhkterh nreieelhkl
      241 kvqldghers lqvv
//
LOCUS       XP_061009463             303 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-ketoglutarate-dependent dioxygenase alkB homolog 4 isoform X1
            [Dama dama].
ACCESSION   XP_061009463
VERSION     XP_061009463.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153480.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..303
                     /product="alpha-ketoglutarate-dependent dioxygenase alkB
                     homolog 4 isoform X1"
                     /calculated_mol_wt=33832
     CDS             1..303
                     /gene="ALKBH4"
                     /coded_by="XM_061153480.1:36..947"
                     /db_xref="GeneID:133063744"
ORIGIN      
        1 maaaavappd vlrecgckgi rtclicerqr ggdppwqhps qkthrfiyyp dtgwavgaee
       61 sdfegwafpf pgvtliedfv treeeaemvq lmdrdpwkls qsgrrkqdyg pkvnfrkqkl
      121 kmagfrglps fsrevvrrmg lypiledfrp veqcnldycp ergsaidphl ddawlwgerl
      181 vslnllsptv lsmsreapgs lllclapsgf pealadgama psrsvpcqev evavplprrs
      241 lvvlrggarh qwkhaihrrd igarrvgvtf relsaefgpg gkqqelgqel lqmalsfhgr
      301 ptt
//
LOCUS       XP_061009464             279 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-ketoglutarate-dependent dioxygenase alkB homolog 4 isoform X2
            [Dama dama].
ACCESSION   XP_061009464
VERSION     XP_061009464.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153481.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..279
                     /product="alpha-ketoglutarate-dependent dioxygenase alkB
                     homolog 4 isoform X2"
                     /calculated_mol_wt=31382
     CDS             1..279
                     /gene="ALKBH4"
                     /coded_by="XM_061153481.1:966..1805"
                     /db_xref="GeneID:133063744"
ORIGIN      
        1 mlseirqsqg ilydstqkth rfiyypdtgw avgaeesdfe gwafpfpgvt liedfvtree
       61 eaemvqlmdr dpwklsqsgr rkqdygpkvn frkqklkmag frglpsfsre vvrrmglypi
      121 ledfrpveqc nldycpergs aidphlddaw lwgerlvsln llsptvlsms reapgslllc
      181 lapsgfpeal adgamapsrs vpcqevevav plprrslvvl rggarhqwkh aihrrdigar
      241 rvgvtfrels aefgpggkqq elgqellqma lsfhgrptt
//
LOCUS       XP_061009465             209 aa            linear   MAM 02-DEC-2023
DEFINITION  PRKR-interacting protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061009465
VERSION     XP_061009465.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153482.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..209
                     /product="PRKR-interacting protein 1 isoform X1"
                     /calculated_mol_wt=23784
     Region          42..>125
                     /region_name="DUF1168"
                     /note="Protein of unknown function (DUF1168); pfam06658"
                     /db_xref="CDD:461977"
     CDS             1..209
                     /gene="PRKRIP1"
                     /coded_by="XM_061153482.1:25..654"
                     /db_xref="GeneID:133063745"
ORIGIN      
        1 massaassvr pprpkkepqa liipknaaee qklklerlmk npdkavpipe kmsewaprpp
       61 pefvrdvmgs sagagsgefh vyrhlrrrey qrqdymdama ekqkldaefq krlernkiaa
      121 eeqtakrrkk rqklkekkll akkmkleqkk qneggsfltq esnshllhvl hwqadslpph
      181 hlgsptavtk atavsrtvik emgtnqpwn
//
LOCUS       XP_061009466             195 aa            linear   MAM 02-DEC-2023
DEFINITION  PRKR-interacting protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061009466
VERSION     XP_061009466.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153483.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..195
                     /product="PRKR-interacting protein 1 isoform X2"
                     /calculated_mol_wt=22229
     Region          42..>125
                     /region_name="DUF1168"
                     /note="Protein of unknown function (DUF1168); pfam06658"
                     /db_xref="CDD:461977"
     CDS             1..195
                     /gene="PRKRIP1"
                     /coded_by="XM_061153483.1:25..612"
                     /db_xref="GeneID:133063745"
ORIGIN      
        1 massaassvr pprpkkepqa liipknaaee qklklerlmk npdkavpipe kmsewaprpp
       61 pefvrdvmgs sagagsgefh vyrhlrrrey qrqdymdama ekqkldaefq krlernkiaa
      121 eeqtakrrkk rqklkekkll akkmkleqkk qneglhhwlt clypvtptap tppdstqllt
      181 vrtpsasrvl gmsqv
//
LOCUS       XP_061009468             186 aa            linear   MAM 02-DEC-2023
DEFINITION  PRKR-interacting protein 1 isoform X3 [Dama dama].
ACCESSION   XP_061009468
VERSION     XP_061009468.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153485.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..186
                     /product="PRKR-interacting protein 1 isoform X3"
                     /calculated_mol_wt=21172
     Region          42..180
                     /region_name="DUF1168"
                     /note="Protein of unknown function (DUF1168); pfam06658"
                     /db_xref="CDD:461977"
     CDS             1..186
                     /gene="PRKRIP1"
                     /coded_by="XM_061153485.1:25..585"
                     /db_xref="GeneID:133063745"
ORIGIN      
        1 massaassvr pprpkkepqa liipknaaee qklklerlmk npdkavpipe kmsewaprpp
       61 pefvrdvmgs sagagsgefh vyrhlrrrey qrqdymdama ekqkldaefq krlernkiaa
      121 eeqtakrrkk rqklkekkll akkmkleqkk qnegsietqe qpssgseeas gtedeeedap
      181 sfvmgr
//
LOCUS       XP_061009469             170 aa            linear   MAM 02-DEC-2023
DEFINITION  PRKR-interacting protein 1 isoform X4 [Dama dama].
ACCESSION   XP_061009469
VERSION     XP_061009469.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153486.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..170
                     /product="PRKR-interacting protein 1 isoform X4"
                     /calculated_mol_wt=19692
     Region          42..>125
                     /region_name="DUF1168"
                     /note="Protein of unknown function (DUF1168); pfam06658"
                     /db_xref="CDD:461977"
     CDS             1..170
                     /gene="PRKRIP1"
                     /coded_by="XM_061153486.1:25..537"
                     /db_xref="GeneID:133063745"
ORIGIN      
        1 massaassvr pprpkkepqa liipknaaee qklklerlmk npdkavpipe kmsewaprpp
       61 pefvrdvmgs sagagsgefh vyrhlrrrey qrqdymdama ekqkldaefq krlernkiaa
      121 eeqtakrrkk rqklkekkll akkmkleqkk qnedkypevk lldcvvvlfl
//
LOCUS       XP_061009470             677 aa            linear   MAM 02-DEC-2023
DEFINITION  SH2B adapter protein 2 isoform X1 [Dama dama].
ACCESSION   XP_061009470
VERSION     XP_061009470.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153487.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..677
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..677
                     /product="SH2B adapter protein 2 isoform X1"
                     /calculated_mol_wt=71676
     Region          61..117
                     /region_name="Phe_ZIP"
                     /note="Phenylalanine zipper; pfam08916"
                     /db_xref="CDD:462631"
     Region          235..350
                     /region_name="PH_SH2B_family"
                     /note="SH2B adapter protein 1, 2, and 3 Pleckstrin
                     homology (PH) domain; cd01231"
                     /db_xref="CDD:269938"
     Region          449..544
                     /region_name="SH2_SH2B2"
                     /note="Src homology 2 (SH2) domain found in SH2B adapter
                     proteins (SH2B1, SH2B2, SH2B3); cd10411"
                     /db_xref="CDD:198274"
     Site            order(464,485,506,508)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198274"
     Site            order(507,534)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198274"
     CDS             1..677
                     /gene="SH2B2"
                     /coded_by="XM_061153487.1:16..2049"
                     /db_xref="GeneID:133063747"
ORIGIN      
        1 mnlraarspa prqpagrdra eartpaahel rssagrasag cdgtgamnga apvpvpvpvp
       61 dwrqfcelha qaaavdfahk fcrflrdnpa ydtpdagasf srhfaanfld vfseevrrvl
      121 vagpapprga aeppdamepg pagppalkaa pyghsrssed vsataaakar vrkgfslrnm
      181 slcvvdgvrd mwhrraspep daapraaepp aeardkwmrr lrlsrtlaak velvdiqreg
      241 alrfmvadda asgpggaaqw qkcrlllrra vagerfrlef fvppkasrpk vsiplsaiie
      301 vrttmplemp ekdntfvlkv engaeyilet idslqkhswv adiqgcadpg dseedaepsc
      361 arggclasrv ascscellte avdlprppet taavvtaphs rareavgesl vhvpletfle
      421 tlespggsgs gsnntaeeaa eleaqaeael elsdypwfhg tlsrvkaaql vlaggprnhg
      481 lfvirqsetr pgeyvltfnf qgkakhlrls lnghgqchvq hlwfqsvldm lrhfhthpip
      541 lesggsadit lrsyvraqgp ppdpgpspsa appppacwse pagqhyfssl aaaacppasp
      601 seaggassss assssaasvp gaprpaaegp lsarsrsnsa erlleaaggg aeeppeagpg
      661 egarghtrav enqysfy
//
LOCUS       XP_061009471             676 aa            linear   MAM 02-DEC-2023
DEFINITION  SH2B adapter protein 2 isoform X2 [Dama dama].
ACCESSION   XP_061009471
VERSION     XP_061009471.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153488.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..676
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..676
                     /product="SH2B adapter protein 2 isoform X2"
                     /calculated_mol_wt=71605
     Region          61..117
                     /region_name="Phe_ZIP"
                     /note="Phenylalanine zipper; pfam08916"
                     /db_xref="CDD:462631"
     Region          235..350
                     /region_name="PH_SH2B_family"
                     /note="SH2B adapter protein 1, 2, and 3 Pleckstrin
                     homology (PH) domain; cd01231"
                     /db_xref="CDD:269938"
     Region          448..543
                     /region_name="SH2_SH2B2"
                     /note="Src homology 2 (SH2) domain found in SH2B adapter
                     proteins (SH2B1, SH2B2, SH2B3); cd10411"
                     /db_xref="CDD:198274"
     Site            order(463,484,505,507)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198274"
     Site            order(506,533)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198274"
     CDS             1..676
                     /gene="SH2B2"
                     /coded_by="XM_061153488.1:22..2052"
                     /db_xref="GeneID:133063747"
ORIGIN      
        1 mnlraarspa prqpagrdra eartpaahel rssagrasag cdgtgamnga apvpvpvpvp
       61 dwrqfcelha qaaavdfahk fcrflrdnpa ydtpdagasf srhfaanfld vfseevrrvl
      121 vagpapprga aeppdamepg pagppalkaa pyghsrssed vsataaakar vrkgfslrnm
      181 slcvvdgvrd mwhrraspep daapraaepp aeardkwmrr lrlsrtlaak velvdiqreg
      241 alrfmvadda asgpggaaqw qkcrlllrra vagerfrlef fvppkasrpk vsiplsaiie
      301 vrttmplemp ekdntfvlkv engaeyilet idslqkhswv adiqgcadpg dseedaepsc
      361 arggclasrv ascscellte vdlprppett aavvtaphsr areavgeslv hvpletflet
      421 lespggsgsg snntaeeaae leaqaeaele lsdypwfhgt lsrvkaaqlv laggprnhgl
      481 fvirqsetrp geyvltfnfq gkakhlrlsl nghgqchvqh lwfqsvldml rhfhthpipl
      541 esggsaditl rsyvraqgpp pdpgpspsaa ppppacwsep agqhyfssla aaacppasps
      601 eaggassssa ssssaasvpg aprpaaegpl sarsrsnsae rlleaaggga eeppeagpge
      661 garghtrave nqysfy
//
LOCUS       XP_061009472             655 aa            linear   MAM 02-DEC-2023
DEFINITION  SH2B adapter protein 2 isoform X3 [Dama dama].
ACCESSION   XP_061009472
VERSION     XP_061009472.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153489.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..655
                     /product="SH2B adapter protein 2 isoform X3"
                     /calculated_mol_wt=69376
     Region          39..95
                     /region_name="Phe_ZIP"
                     /note="Phenylalanine zipper; pfam08916"
                     /db_xref="CDD:462631"
     Region          213..328
                     /region_name="PH_SH2B_family"
                     /note="SH2B adapter protein 1, 2, and 3 Pleckstrin
                     homology (PH) domain; cd01231"
                     /db_xref="CDD:269938"
     Region          427..522
                     /region_name="SH2_SH2B2"
                     /note="Src homology 2 (SH2) domain found in SH2B adapter
                     proteins (SH2B1, SH2B2, SH2B3); cd10411"
                     /db_xref="CDD:198274"
     Site            order(442,463,484,486)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198274"
     Site            order(485,512)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198274"
     CDS             1..655
                     /gene="SH2B2"
                     /coded_by="XM_061153489.1:117..2084"
                     /db_xref="GeneID:133063747"
ORIGIN      
        1 mtghqwssaq hsepasagcd gtgamngaap vpvpvpvpdw rqfcelhaqa aavdfahkfc
       61 rflrdnpayd tpdagasfsr hfaanfldvf seevrrvlva gpapprgaae ppdamepgpa
      121 gppalkaapy ghsrssedvs ataaakarvr kgfslrnmsl cvvdgvrdmw hrraspepda
      181 apraaeppae ardkwmrrlr lsrtlaakve lvdiqregal rfmvaddaas gpggaaqwqk
      241 crlllrrava gerfrleffv ppkasrpkvs iplsaiievr ttmplempek dntfvlkven
      301 gaeyiletid slqkhswvad iqgcadpgds eedaepscar ggclasrvas cscellteav
      361 dlprppetta avvtaphsra reavgeslvh vpletfletl espggsgsgs nntaeeaael
      421 eaqaeaelel sdypwfhgtl srvkaaqlvl aggprnhglf virqsetrpg eyvltfnfqg
      481 kakhlrlsln ghgqchvqhl wfqsvldmlr hfhthpiple sggsaditlr syvraqgppp
      541 dpgpspsaap pppacwsepa gqhyfsslaa aacppaspse aggassssas sssaasvpga
      601 prpaaegpls arsrsnsaer lleaagggae eppeagpgeg arghtraven qysfy
//
LOCUS       XP_061009473             631 aa            linear   MAM 02-DEC-2023
DEFINITION  SH2B adapter protein 2 isoform X4 [Dama dama].
ACCESSION   XP_061009473
VERSION     XP_061009473.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153490.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..631
                     /product="SH2B adapter protein 2 isoform X4"
                     /calculated_mol_wt=67020
     Region          15..71
                     /region_name="Phe_ZIP"
                     /note="Phenylalanine zipper; pfam08916"
                     /db_xref="CDD:462631"
     Region          189..304
                     /region_name="PH_SH2B_family"
                     /note="SH2B adapter protein 1, 2, and 3 Pleckstrin
                     homology (PH) domain; cd01231"
                     /db_xref="CDD:269938"
     Region          403..498
                     /region_name="SH2_SH2B2"
                     /note="Src homology 2 (SH2) domain found in SH2B adapter
                     proteins (SH2B1, SH2B2, SH2B3); cd10411"
                     /db_xref="CDD:198274"
     Site            order(418,439,460,462)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198274"
     Site            order(461,488)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198274"
     CDS             1..631
                     /gene="SH2B2"
                     /coded_by="XM_061153490.1:292..2187"
                     /db_xref="GeneID:133063747"
ORIGIN      
        1 mngaapvpvp vpvpdwrqfc elhaqaaavd fahkfcrflr dnpaydtpda gasfsrhfaa
       61 nfldvfseev rrvlvagpap prgaaeppda mepgpagppa lkaapyghsr ssedvsataa
      121 akarvrkgfs lrnmslcvvd gvrdmwhrra spepdaapra aeppaeardk wmrrlrlsrt
      181 laakvelvdi qregalrfmv addaasgpgg aaqwqkcrll lrravagerf rleffvppka
      241 srpkvsipls aiievrttmp lempekdntf vlkvengaey iletidslqk hswvadiqgc
      301 adpgdseeda epscarggcl asrvascsce llteavdlpr ppettaavvt aphsrareav
      361 geslvhvple tfletlespg gsgsgsnnta eeaaeleaqa eaelelsdyp wfhgtlsrvk
      421 aaqlvlaggp rnhglfvirq setrpgeyvl tfnfqgkakh lrlslnghgq chvqhlwfqs
      481 vldmlrhfht hpiplesggs aditlrsyvr aqgpppdpgp spsaappppa cwsepagqhy
      541 fsslaaaacp paspseagga ssssassssa asvpgaprpa aegplsarsr snsaerllea
      601 agggaeeppe agpgegargh travenqysf y
//
LOCUS       XP_061009474             631 aa            linear   MAM 02-DEC-2023
DEFINITION  SH2B adapter protein 2 isoform X4 [Dama dama].
ACCESSION   XP_061009474
VERSION     XP_061009474.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153491.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..631
                     /product="SH2B adapter protein 2 isoform X4"
                     /calculated_mol_wt=67020
     Region          15..71
                     /region_name="Phe_ZIP"
                     /note="Phenylalanine zipper; pfam08916"
                     /db_xref="CDD:462631"
     Region          189..304
                     /region_name="PH_SH2B_family"
                     /note="SH2B adapter protein 1, 2, and 3 Pleckstrin
                     homology (PH) domain; cd01231"
                     /db_xref="CDD:269938"
     Region          403..498
                     /region_name="SH2_SH2B2"
                     /note="Src homology 2 (SH2) domain found in SH2B adapter
                     proteins (SH2B1, SH2B2, SH2B3); cd10411"
                     /db_xref="CDD:198274"
     Site            order(418,439,460,462)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198274"
     Site            order(461,488)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198274"
     CDS             1..631
                     /gene="SH2B2"
                     /coded_by="XM_061153491.1:112..2007"
                     /db_xref="GeneID:133063747"
ORIGIN      
        1 mngaapvpvp vpvpdwrqfc elhaqaaavd fahkfcrflr dnpaydtpda gasfsrhfaa
       61 nfldvfseev rrvlvagpap prgaaeppda mepgpagppa lkaapyghsr ssedvsataa
      121 akarvrkgfs lrnmslcvvd gvrdmwhrra spepdaapra aeppaeardk wmrrlrlsrt
      181 laakvelvdi qregalrfmv addaasgpgg aaqwqkcrll lrravagerf rleffvppka
      241 srpkvsipls aiievrttmp lempekdntf vlkvengaey iletidslqk hswvadiqgc
      301 adpgdseeda epscarggcl asrvascsce llteavdlpr ppettaavvt aphsrareav
      361 geslvhvple tfletlespg gsgsgsnnta eeaaeleaqa eaelelsdyp wfhgtlsrvk
      421 aaqlvlaggp rnhglfvirq setrpgeyvl tfnfqgkakh lrlslnghgq chvqhlwfqs
      481 vldmlrhfht hpiplesggs aditlrsyvr aqgpppdpgp spsaappppa cwsepagqhy
      541 fsslaaaacp paspseagga ssssassssa asvpgaprpa aegplsarsr snsaerllea
      601 agggaeeppe agpgegargh travenqysf y
//
LOCUS       XP_061009475            1541 aa            linear   MAM 02-DEC-2023
DEFINITION  homeobox protein cut-like 1 isoform X1 [Dama dama].
ACCESSION   XP_061009475
VERSION     XP_061009475.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153492.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1541
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1541
                     /product="homeobox protein cut-like 1 isoform X1"
                     /calculated_mol_wt=167606
     Region          <107..381
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          558..634
                     /region_name="CUT"
                     /note="CUT domain; pfam02376"
                     /db_xref="CDD:460543"
     Region          <725..940
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          951..1019
                     /region_name="CUT"
                     /note="CUT domain; pfam02376"
                     /db_xref="CDD:460543"
     Region          1134..1211
                     /region_name="CUT"
                     /note="CUT domain; pfam02376"
                     /db_xref="CDD:460543"
     Region          1257..1313
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..1541
                     /gene="CUX1"
                     /coded_by="XM_061153492.1:143..4768"
                     /db_xref="GeneID:133063748"
ORIGIN      
        1 maanvgsmfq ywkrfdlqql qreldatatv lanrqdeseq srkrlieqsr efkkntpedl
       61 rkqvapllks fqgeidalsk rskeaeaafl nvykrlidvp dpvpaldlgq qlqlkvqrlh
      121 dietenqklr etleeynkef aevknqevti kalkekirey eqtlknqaet ialekeqklq
      181 ndfaekerkl qetqmsttsk leeaehkvqt lqtalektqt elfdlktkyd eeitakadei
      241 emimtdlera nqraevaqre aetlreqlss anhslqlasq iqkapdveqa ievltrssle
      301 aelaakerei aqlvedvqrl qanlsklren sasqisqleq qlsaknstlk qleeklkgqa
      361 dyeevkkeln ilksmefapa egagtqdasr plevlllekt rslqsenaal risnsdlsgs
      421 arrkgkdqpe srrpgplpas ppsqlprntg eqasntngth qfspagltqd ffssslasps
      481 lplastgkfa lnsllqrqlm qsfyskamqe agstsmifst gpystnsiss qsplqqspdv
      541 ngmapspsqs esagsvsege eidtaeiarq vkeqlikhni gqrifghyvl glsqgsvsei
      601 larpkpwnkl tvrgkepfhk mkqflsdeqn ilalrsiqgr qrenpgqsln rlfqevpkrr
      661 ngsegnittr irasetgsde aiksileqak relqvqktae paqpssasss gsaddairsi
      721 lqqarremea qqaalepalk pvppsqtdia lltpklipas pmssvssysp lavslkkpps
      781 apdasattlp npaalkkesq dtpgpdlpga adpaaqgvlr hvkselgrgg vwkdhwwsav
      841 qperkssapp edpkaedasg gkekgsgsag sggqvraers qlqgpsssey wkdwpsaesp
      901 ysqsselslt gasrsetpqn splpsspivp lskptkpsvp pltpeqyeiy myqevdtiel
      961 trqvkeklak ngicqrifge kvlglsqgsv sdmlsrpkpw skltqkgrep firmqlwlng
     1021 elgqgvlpvq gqpqgpvlhs vtslqdplqq gcvssestpk tsascspape spmsssesvk
     1081 sltelvqqpc ppietskdgk ppepsdppas dsqpaiplpl sghsalsiqe lvamspeldt
     1141 ygitkrvkev ltdnnlgqrl fgetilgltq gsvsdllarp kpwhklslkg repfvrmqlw
     1201 lndpnnvekl mdmkrmekka ymkrrhssvs dsqpceppsv gidysqgasp qpqhqlkkpr
     1261 vvlapeekea lkrayqqkpy pspktieela tklnlktstv inwfhnyrsr irrelfieei
     1321 qagsqgqaga sdspsarsgr aapssegdsc dgveaaegpg aadaeelggp aaaaksqggp
     1381 aeaaaapeer eeaprpaeka epppsgtpvp daaddegrpr apppppppeg padgpgpvpn
     1441 pvaaaapaag edaatsaapp gegpcrardg adrssalpst sapaaarrps slqslfglpe
     1501 aagardsrdn plrkkkaanl nsiihrleka asreepiewe f
//
LOCUS       XP_061009477            1539 aa            linear   MAM 02-DEC-2023
DEFINITION  homeobox protein cut-like 1 isoform X2 [Dama dama].
ACCESSION   XP_061009477
VERSION     XP_061009477.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153494.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1539
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1539
                     /product="homeobox protein cut-like 1 isoform X2"
                     /calculated_mol_wt=167349
     Region          40..>362
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          556..632
                     /region_name="CUT"
                     /note="CUT domain; pfam02376"
                     /db_xref="CDD:460543"
     Region          <723..938
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          949..1017
                     /region_name="CUT"
                     /note="CUT domain; pfam02376"
                     /db_xref="CDD:460543"
     Region          1132..1209
                     /region_name="CUT"
                     /note="CUT domain; pfam02376"
                     /db_xref="CDD:460543"
     Region          1255..1311
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..1539
                     /gene="CUX1"
                     /coded_by="XM_061153494.1:145..4764"
                     /db_xref="GeneID:133063748"
ORIGIN      
        1 maanvgsmfq ywkrfdlqql qreldatatv lanrqdeseq srkrlieqsr efkkntpedl
       61 rkqvapllks fqgeidalsk rskeaeaafl nvykrlidvp dpvpaldlgq qlqlkvqrlh
      121 dietenqklr etleeynkef aevknqevti kalkekirey eqtlknqaet ialekeqklq
      181 ndfaekerkl qetqmsttsk leeaehkvqt lqtalektqt elfdlktkyd eeitakadei
      241 emimtdlera nqraevaqre aetlreqlss anhslqlasq iqkapdvaie vltrssleae
      301 laakereiaq lvedvqrlqa nlsklrensa sqisqleqql saknstlkql eeklkgqady
      361 eevkkelnil ksmefapaeg agtqdasrpl evlllektrs lqsenaalri snsdlsgsar
      421 rkgkdqpesr rpgplpaspp sqlprntgeq asntngthqf spagltqdff ssslaspslp
      481 lastgkfaln sllqrqlmqs fyskamqeag stsmifstgp ystnsissqs plqqspdvng
      541 mapspsqses agsvsegeei dtaeiarqvk eqlikhnigq rifghyvlgl sqgsvseila
      601 rpkpwnkltv rgkepfhkmk qflsdeqnil alrsiqgrqr enpgqslnrl fqevpkrrng
      661 segnittrir asetgsdeai ksileqakre lqvqktaepa qpssasssgs addairsilq
      721 qarremeaqq aalepalkpv ppsqtdiall tpklipaspm ssvssyspla vslkkppsap
      781 dasattlpnp aalkkesqdt pgpdlpgaad paaqgvlrhv kselgrggvw kdhwwsavqp
      841 erkssapped pkaedasggk ekgsgsagsg gqvraersql qgpssseywk dwpsaespys
      901 qsselsltga srsetpqnsp lpsspivpls kptkpsvppl tpeqyeiymy qevdtieltr
      961 qvkeklakng icqrifgekv lglsqgsvsd mlsrpkpwsk ltqkgrepfi rmqlwlngel
     1021 gqgvlpvqgq pqgpvlhsvt slqdplqqgc vssestpkts ascspapesp msssesvksl
     1081 telvqqpcpp ietskdgkpp epsdppasds qpaiplplsg hsalsiqelv amspeldtyg
     1141 itkrvkevlt dnnlgqrlfg etilgltqgs vsdllarpkp whklslkgre pfvrmqlwln
     1201 dpnnveklmd mkrmekkaym krrhssvsds qpceppsvgi dysqgaspqp qhqlkkprvv
     1261 lapeekealk rayqqkpyps pktieelatk lnlktstvin wfhnyrsrir relfieeiqa
     1321 gsqgqagasd spsarsgraa pssegdscdg veaaegpgaa daeelggpaa aaksqggpae
     1381 aaaapeeree aprpaekaep ppsgtpvpda addegrprap ppppppegpa dgpgpvpnpv
     1441 aaaapaaged aatsaappge gpcrardgad rssalpstsa paaarrpssl qslfglpeaa
     1501 gardsrdnpl rkkkaanlns iihrlekaas reepiewef
//
LOCUS       XP_061009478             677 aa            linear   MAM 02-DEC-2023
DEFINITION  protein CASP isoform X3 [Dama dama].
ACCESSION   XP_061009478
VERSION     XP_061009478.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153495.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..677
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..677
                     /product="protein CASP isoform X3"
                     /calculated_mol_wt=77294
     Region          <107..368
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          423..627
                     /region_name="CASP_C"
                     /note="CASP C terminal; pfam08172"
                     /db_xref="CDD:462392"
     CDS             1..677
                     /gene="CUX1"
                     /coded_by="XM_061153495.1:93..2126"
                     /db_xref="GeneID:133063748"
ORIGIN      
        1 maanvgsmfq ywkrfdlqql qreldatatv lanrqdeseq srkrlieqsr efkkntpedl
       61 rkqvapllks fqgeidalsk rskeaeaafl nvykrlidvp dpvpaldlgq qlqlkvqrlh
      121 dietenqklr etleeynkef aevknqevti kalkekirey eqtlknqaet ialekeqklq
      181 ndfaekerkl qetqmsttsk leeaehkvqt lqtalektqt elfdlktkyd eeitakadei
      241 emimtdlera nqraevaqre aetlreqlss anhslqlasq iqkapdveqa ievltrssle
      301 aelaakerei aqlvedvqrl qanlsklren sasqisqleq qlsaknstlk qleeklkgqa
      361 dyeevkkeln ilksmefapa egagtqdasr plevlllekt rslqsenaal risnsdlsgr
      421 caemqvhvte ltataaeqre liarleqdls tiqsiqrpda egaaelglek ipepikeata
      481 lfygplapas slpegqvdsl lsiissqrer frarnqelea enrlaqhtiq alqteldslr
      541 adniklfeki kflqsypgrg ggsddtelry stqyeerldp fssfskrerq rkylslspwd
      601 katlsmgrlv lsnkmartig ffytlflhll vflvlyklaw sesmerdcat fcakkfadhl
      661 hkfhendkgv aandlwq
//
LOCUS       XP_061009479             310 aa            linear   MAM 02-DEC-2023
DEFINITION  collagen alpha-1(XXVI) chain [Dama dama].
ACCESSION   XP_061009479
VERSION     XP_061009479.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153496.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..310
                     /product="collagen alpha-1(XXVI) chain"
                     /calculated_mol_wt=30443
     CDS             1..310
                     /gene="COL26A1"
                     /coded_by="XM_061153496.1:343..1275"
                     /db_xref="GeneID:133063749"
ORIGIN      
        1 mnctrlsdms erlttleakv llleaaerps gpdndlptpq ntpppwnegl lpdaiplahp
       61 gpqrrrptgp agppgqtgpp gpagppgskg drgqagekgp agppgllgpp gprglpgemg
      121 rpgppgppgp agspglppng pqgvlyslqp ptdkdngdvq lasaavdtvl agvpgprgpp
      181 gppgppgphg ppgppgapgs qglagergat gpsgepggkg eeeekaaaeg egvqqlreal
      241 kilaervlil ehmigihdpq atpeggsgqd aalranlkmk rggpppdgsl aallgpdpgq
      301 rsagrassgk
//
LOCUS       XP_061009480             185 aa            linear   MAM 02-DEC-2023
DEFINITION  intraflagellar transport protein 22 homolog [Dama dama].
ACCESSION   XP_061009480
VERSION     XP_061009480.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153497.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..185
                     /product="intraflagellar transport protein 22 homolog"
                     /calculated_mol_wt=20712
     Region          2..>121
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            10..17
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206648"
     Site            35
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            44..46
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            63..66
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            order(65..66,82..83)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     CDS             1..185
                     /gene="IFT22"
                     /coded_by="XM_061153497.1:90..647"
                     /db_xref="GeneID:133063750"
ORIGIN      
        1 mlkakilfvg pcesgktvla nfltessdit eynptqgvri lefenpqvts nnkgtgceie
       61 lwdcggdpkf escwpalmkd shgvvivfna dipshlkeie twyscfvqqq flqntqclli
      121 ahhkpgsgsd kenpalappl nklklvhsnl eddpeeirme fikylrsiin svsesrdree
      181 msiit
//
LOCUS       XP_061009481             155 aa            linear   MAM 02-DEC-2023
DEFINITION  mitochondrial fission 1 protein isoform X1 [Dama dama].
ACCESSION   XP_061009481
VERSION     XP_061009481.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153498.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..155
                     /product="mitochondrial fission 1 protein isoform X1"
                     /calculated_mol_wt=17077
     Region          18..126
                     /region_name="Fis1"
                     /note="Mitochondrial Fission Protein Fis1, cytosolic
                     domain; cd12212"
                     /db_xref="CDD:276936"
     Site            order(19..20,23,35..37,39..40,43,52,55..56,58..59,62,65,
                     67,69,72..75,77,79,87,89,92,95..96,99)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:276936"
     Region          35..68
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276936"
     Region          72..103
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276936"
     CDS             1..155
                     /gene="FIS1"
                     /coded_by="XM_061153498.1:402..869"
                     /db_xref="GeneID:133063751"
ORIGIN      
        1 mktlrvqgaw vpgdeagekf erkfqsekaa gsvskstqfe yawclvrsky nddirkglal
       61 leellpkgsk eeqrdyvfyl avgnyrlkey ekalkyvrgl lqtepqnnqa kelerlidka
      121 mkkdglvgma ivggmalgva glagliglav sksks
//
LOCUS       XP_061009482             152 aa            linear   MAM 02-DEC-2023
DEFINITION  mitochondrial fission 1 protein isoform X2 [Dama dama].
ACCESSION   XP_061009482
VERSION     XP_061009482.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153499.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..152
                     /product="mitochondrial fission 1 protein isoform X2"
                     /calculated_mol_wt=16807
     Region          9..123
                     /region_name="Fis1"
                     /note="Mitochondrial Fission Protein Fis1, cytosolic
                     domain; cd12212"
                     /db_xref="CDD:276936"
     Site            order(13,16..17,20,32..34,36..37,40,49,52..53,55..56,59,
                     62,64,66,69..72,74,76,84,86,89,92..93,96)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:276936"
     Region          32..65
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276936"
     Region          69..100
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276936"
     CDS             1..152
                     /gene="FIS1"
                     /coded_by="XM_061153499.1:114..572"
                     /db_xref="GeneID:133063751"
ORIGIN      
        1 meavlnelvs vedllkferk fqsekaagsv skstqfeyaw clvrskyndd irkglallee
       61 llpkgskeeq rdyvfylavg nyrlkeyeka lkyvrgllqt epqnnqakel erlidkamkk
      121 dglvgmaivg gmalgvagla gliglavsks ks
//
LOCUS       XP_061009483             131 aa            linear   MAM 02-DEC-2023
DEFINITION  mitochondrial fission 1 protein isoform X3 [Dama dama].
ACCESSION   XP_061009483
VERSION     XP_061009483.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153500.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..131
                     /product="mitochondrial fission 1 protein isoform X3"
                     /calculated_mol_wt=14464
     Region          <43..102
                     /region_name="Fis1"
                     /note="Mitochondrial Fission Protein Fis1, cytosolic
                     domain; cd12212"
                     /db_xref="CDD:276936"
     Region          48..79
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276936"
     CDS             1..131
                     /gene="FIS1"
                     /coded_by="XM_061153500.1:343..738"
                     /db_xref="GeneID:133063751"
ORIGIN      
        1 mfagwralvg ehsewkkggr henspcagrm gawrrswrel lpkgskeeqr dyvfylavgn
       61 yrlkeyekal kyvrgllqte pqnnqakele rlidkamkkd glvgmaivgg malgvaglag
      121 liglavsksk s
//
LOCUS       XP_061009485             235 aa            linear   MAM 02-DEC-2023
DEFINITION  claudin-15 isoform X1 [Dama dama].
ACCESSION   XP_061009485
VERSION     XP_061009485.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153502.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..235
                     /product="claudin-15 isoform X1"
                     /calculated_mol_wt=24836
     Region          4..177
                     /region_name="PMP22_Claudin"
                     /note="PMP-22/EMP/MP20/Claudin family; cl21598"
                     /db_xref="CDD:473919"
     CDS             1..235
                     /gene="CLDN15"
                     /coded_by="XM_061153502.1:291..998"
                     /db_xref="GeneID:133063752"
ORIGIN      
        1 mpvaveifgf fltavgllml gvtlahsswr vstvhgnvit tntifenlwy scatdsmgvh
       61 ncwefpsmla lsgyiqacra lmitaillgf lglllgmvgl rctnigglel srktklaaaa
      121 galhilagic gmvavswyaf nitrdffdpl yagtkyelgp alylgwsacl lailggiclf
      181 sncccsrdwd paagaqlpyk apvipaasla arlpaaasde egdssfgkyg knayv
//
LOCUS       XP_061009486             189 aa            linear   MAM 02-DEC-2023
DEFINITION  claudin-15 isoform X2 [Dama dama].
ACCESSION   XP_061009486
VERSION     XP_061009486.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153503.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..189
                     /product="claudin-15 isoform X2"
                     /calculated_mol_wt=19976
     Region          <27..131
                     /region_name="PMP22_Claudin"
                     /note="PMP-22/EMP/MP20/Claudin family; cl21598"
                     /db_xref="CDD:473919"
     CDS             1..189
                     /gene="CLDN15"
                     /coded_by="XM_061153503.1:16..585"
                     /db_xref="GeneID:133063752"
ORIGIN      
        1 mgpsrlesrr rgkgrlwdpw lrpaspgyiq acralmitai llgflglllg mvglrctnig
       61 glelsrktkl aaaagalhil agicgmvavs wyafnitrdf fdplyagtky elgpalylgw
      121 sacllailgg iclfsncccs rdwdpaagaq lpykapvipa aslaarlpaa asdeegdssf
      181 gkygknayv
//
LOCUS       XP_061009487             154 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger HIT domain-containing protein 1 [Dama dama].
ACCESSION   XP_061009487
VERSION     XP_061009487.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153504.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..154
                     /product="zinc finger HIT domain-containing protein 1"
                     /calculated_mol_wt=17435
     Region          75..>135
                     /region_name="YL1_C"
                     /note="YL1 nuclear protein C-terminal domain; cl02154"
                     /db_xref="CDD:470478"
     Region          108..150
                     /region_name="zf-HIT_ZNHIT1_like"
                     /note="HIT zinc finger found in zinc finger HIT
                     domain-containing protein 1 (ZNHIT1) and similar proteins;
                     cd21437"
                     /db_xref="CDD:467791"
     Site            order(112..116,119..122,124..127,129,137..138)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467791"
     Site            order(117,120,128,131,136,140,144,149)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:467791"
     CDS             1..154
                     /gene="ZNHIT1"
                     /coded_by="XM_061153504.1:762..1226"
                     /db_xref="GeneID:133063753"
ORIGIN      
        1 mvekktsvrs qdpgqrrvld raarqrrinr qlealendnf qddphaglpq lgkrlpqfdd
       61 dtdtgkkkkk trgdhfklrf rknfqallee qnlsvaegpn yltacagpps rpqrpfcavc
      121 gfpspytcvs cgaryctvrc lgthqetrcl kwtv
//
LOCUS       XP_061009488             158 aa            linear   MAM 02-DEC-2023
DEFINITION  AP-1 complex subunit sigma-1A [Dama dama].
ACCESSION   XP_061009488
VERSION     XP_061009488.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153505.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..158
                     /product="AP-1 complex subunit sigma-1A"
                     /calculated_mol_wt=18602
     Region          3..145
                     /region_name="AP1_sigma"
                     /note="AP-1 complex subunit sigma; cd14831"
                     /db_xref="CDD:341435"
     Site            order(9..10,15,62..65,88..89,92,97..101)
                     /site_type="other"
                     /note="dileucine motif interface [polypeptide binding]"
                     /db_xref="CDD:341435"
     Site            order(14..17,19..20,45..49,75..79,81..83,86,97,104..107,
                     111..112,115..116,119..126,128..130,137..139,141..142,145)
                     /site_type="other"
                     /note="AP-1 gamma interface [polypeptide binding]"
                     /db_xref="CDD:341435"
     Site            order(26,30,34,37,51..54)
                     /site_type="other"
                     /note="AP-1 mu interface [polypeptide binding]"
                     /db_xref="CDD:341435"
     CDS             1..158
                     /gene="AP1S1"
                     /coded_by="XM_061153505.1:120..596"
                     /db_xref="GeneID:133063754"
ORIGIN      
        1 mmrfmllfsr qgklrlqkwy latsdkerkk mvrelmqvvl arkpkmcsfl ewrdlkvvyk
       61 ryaslyfcca iegqdnelit lelihryvel ldkyfgsvce ldiifnfeka yfildeflmg
      121 gdvqdtskks vlkaieqadl lqeedesprs vleemgla
//
LOCUS       XP_061009489             402 aa            linear   MAM 02-DEC-2023
DEFINITION  plasminogen activator inhibitor 1 [Dama dama].
ACCESSION   XP_061009489
VERSION     XP_061009489.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153506.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..402
                     /product="plasminogen activator inhibitor 1"
                     /calculated_mol_wt=45168
     Region          32..402
                     /region_name="serpinE1_PAI-1"
                     /note="serpin family E member 1, plasminogen activator
                     inhibitor-1; cd02051"
                     /db_xref="CDD:381007"
     Site            order(124,133..134,137,143,145..148,154,158,161..162)
                     /site_type="other"
                     /note="vitronectin binding site [polypeptide binding]"
                     /db_xref="CDD:381007"
     Site            order(172..173,346,348)
                     /site_type="other"
                     /note="putative Cl binding site [ion binding]"
                     /db_xref="CDD:381007"
     Site            order(228,230,233,235,245,264,292..295,361..362,364..373)
                     /site_type="other"
                     /note="plasminogen activator binding site [polypeptide
                     binding]"
                     /db_xref="CDD:381007"
     Site            355..380
                     /site_type="other"
                     /note="reactive center loop (RCL)"
                     /db_xref="CDD:381007"
     CDS             1..402
                     /gene="SERPINE1"
                     /coded_by="XM_061153506.1:199..1407"
                     /db_xref="GeneID:133063756"
ORIGIN      
        1 mqtslvsacl alglaltfge gsasyqrqsp aaslatdfgv rvfqqvvqas kdrnvvfspy
       61 gvasvlamlq lttggetrrq ireamqfkie ekgmapalhr lykelmgpwn kdeistadai
      121 fvqrdlelvh gfmpnffrlf rttvkqvdfs everarfiin dwvkrhtkgm isdllgegav
      181 dqltrlvlvn alyfngqwkm pfpesnthhr lfhksdgstv svpmmaqtnk fnytefttpd
      241 ghyydilelp yhgntlsmfi aapyekevpl saltsildae lisqwkgnmt rltrllvlpk
      301 fsleteidlr rplenlgmtd mfrpsqadfs slsdqeslyv sqalqkvkie vnesgtlass
      361 stalivsarm apeeiimdrp flfvvrhnpt gtvlfmgqvm ep
//
LOCUS       XP_061009491             755 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase TRIM56 [Dama dama].
ACCESSION   XP_061009491
VERSION     XP_061009491.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153508.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..755
                     /product="E3 ubiquitin-protein ligase TRIM56"
                     /calculated_mol_wt=81411
     Region          18..73
                     /region_name="RING-HC_TRIM56_C-V"
                     /note="RING finger, HC subclass, found in tripartite
                     motif-containing protein 56 (TRIM56) and similar proteins;
                     cd16584"
                     /db_xref="CDD:438246"
     Region          99..149
                     /region_name="Bbox1_TRIM56_C-V"
                     /note="B-box-type 1 zinc finger found in tripartite
                     motif-containing protein 56 (TRIM56) and similar proteins;
                     cd19810"
                     /db_xref="CDD:380868"
     Region          165..209
                     /region_name="Bbox2_TRIM56_C-V"
                     /note="B-box-type 2 zinc finger found in tripartite
                     motif-containing protein 56 (TRIM56) and similar proteins;
                     cd19789"
                     /db_xref="CDD:380847"
     Region          <520..748
                     /region_name="NHL"
                     /note="NHL repeat unit of beta-propeller proteins;
                     cl18310"
                     /db_xref="CDD:302697"
     Region          552..626
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          579..627
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          634..674
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          635..672
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          681..720
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          681..714
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     Region          723..748
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271320"
     CDS             1..755
                     /gene="TRIM56"
                     /coded_by="XM_061153508.1:282..2549"
                     /db_xref="GeneID:133063757"
ORIGIN      
        1 mvsqgsspsl lealssdfla ckicleqlqv pktlpclhty cqdclaqlae ggrlrcpecr
       61 esvpvppagv aafktnffvn glldlvkara ggdlragkpa calcplmgga saggpatarc
      121 ldcaddlcqa cadghrctrq thshrvvdlv gyragwydee arerqaaqcp qhpgealrfl
      181 cqpcsqllcr ecrldphldh pclplaeavr arkpgleell agvdnnlael eatrlaekea
      241 larlreqaak vvmqveeaae gvlrallaqk qevlgqlrah veaaeeaare rlgelegreq
      301 vareaaafar rvlslgreae ilslegaiaq rlrqlqdcpw vpgpapcqlp qlelhpglld
      361 knchllrlsf eeqqlqkdsr kdgarspggd atqpqssdgv qtpnqdraqt pqedeaqplk
      421 aeraetpqed gaktpkegra qtpqedggtq aarggrsnkk rkfkgrlksv srepspapgp
      481 nlegsgllpr piffcsfptr mpgdkrapri tglcpfgsre ilvadeqnra lkrfslngdy
      541 rgavpvpegc spcsvaalqd avafsaaarl ylinhngevq wrralslcqa shavaampsg
      601 drvavsvsgh vevynmegsl atrfipggka nrglralvfl ttspqghfvg sdwqqnslvv
      661 cdglgqvvge yrgpglhgcq pgsvsvdkkg yifltlrevn kvvildpkga llgdfltayh
      721 glekprvttm vdgrylvvsl sngtihvfrv rplds
//
LOCUS       XP_061009492            1164 aa            linear   MAM 02-DEC-2023
DEFINITION  mucin-2-like isoform X1 [Dama dama].
ACCESSION   XP_061009492
VERSION     XP_061009492.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153509.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1164
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1164
                     /product="mucin-2-like isoform X1"
                     /calculated_mol_wt=118170
     Region          <63..959
                     /region_name="FhaB"
                     /note="Large exoprotein involved in heme utilization or
                     adhesion [Intracellular trafficking, secretion, and
                     vesicular transport]; COG3210"
                     /db_xref="CDD:442443"
     Region          <450..>733
                     /region_name="ser_rich_anae_1"
                     /note="serine-rich protein; NF033849"
                     /db_xref="CDD:468206"
     Region          1092..>1164
                     /region_name="SEA"
                     /note="SEA domain; pfam01390"
                     /db_xref="CDD:460188"
     CDS             1..1164
                     /gene="LOC133063758"
                     /coded_by="XM_061153509.1:1661..5155"
                     /db_xref="GeneID:133063758"
ORIGIN      
        1 mttsalsest vssegshtts ghsestvsse aspttvpgnf ittsgqsept vsfeaspttv
       61 pgsstttsvl sestvssegs qttvllssat tfdqsgstis seaspttvlg sstttsvlse
      121 stvssessht tsgqseptvs setspttvpr sfittsglse ptmssegsqt tvllsstttf
      181 dqsgstvsse gspttvagsf ittsdqsest vssesfptvv lgsssttsil sestvssdss
      241 httshqsgst vssevspttv pgsfittsgq sestvssess pttvpgsstt tsvlsestvs
      301 sevsqttvll sstttfdqsg stissessht tvpgsfvtts gqfeptvsse gsastvpgss
      361 tttsswseft vtsngpptif pgtstttfaw sdytvssgss httsdqsast vssesflttv
      421 lgsfptistv sestvsfeds httvpvsflt tsgqtestis segshttvlw sstttsdltl
      481 stvssdnfht tsgqseftvs segslttgfg ssptpsvqse stvssesfhs tisgslttts
      541 gqfestvssq dshttdpgss tftsaqsest vssegsliti plssvstsgq sestvssegs
      601 httsgqsest vssegyltts gqsessvsps gsptmvpgss tttglsestv ssdgshttis
      661 mssptisgls eftvssegsl ttqpgsfatt sgwsassvss esshtgvsgs stapsstget
      721 lssssgsvqs ttfvtqkstd hntisdfsqv tdlptstisq edgspvstss paesitsstg
      781 deerttystp eatvsttvsa psthtvssyt stiyipsnse glstttsstg lstttitems
      841 svlstisess mstsypshgs slasssipsl lsttpsvstq titglteelt latstpdssk
      901 ptgtlnstvt vgneisasts rpgeslttsv gdghmttsss lgstlytsss dgsvpsfsth
      961 slnstnsasp sssspseist htvvsqyttm takeestsgf sspvsstspg stgvpvpgfs
     1021 ttstphppst rtqttmrtth sstmtplqcy ngatwngkkc vcakgysgyq ckypkesfpi
     1081 etpqkinatv dlrvkvtnrg ftddlndkss dayknfvqlf ksrmdkvyrd knfpqyrgvn
     1141 vtrlrpgsiv vehelimean ytsg
//
LOCUS       XP_061009493             217 aa            linear   MAM 02-DEC-2023
DEFINITION  mucin-12-like isoform X2 [Dama dama].
ACCESSION   XP_061009493
VERSION     XP_061009493.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153510.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..217
                     /product="mucin-12-like isoform X2"
                     /calculated_mol_wt=24148
     CDS             1..217
                     /gene="LOC133063758"
                     /coded_by="XM_061153510.1:5190..5843"
                     /db_xref="GeneID:133063758"
ORIGIN      
        1 mnetgqlhgn sedcknlsll cydetdtivn pvkinfdlqe qctknaakel aqfyyvdeld
       61 gklacvnkct pgtksemdch hgrcqlqqsg prclclnsdt hwysgetces stsksvvygv
      121 vgavaallvi lvvvliflls rsqrklhsrq ecdmsrewqd agypgsfent svwegqdlkg
      181 dtfgleniyr nfqpslrsvd pttelhiqrp tvvttaq
//
LOCUS       XP_061009494             216 aa            linear   MAM 02-DEC-2023
DEFINITION  mucin-12-like isoform X3 [Dama dama].
ACCESSION   XP_061009494
VERSION     XP_061009494.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153511.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..216
                     /product="mucin-12-like isoform X3"
                     /calculated_mol_wt=24061
     CDS             1..216
                     /gene="LOC133063758"
                     /coded_by="XM_061153511.1:5187..5837"
                     /db_xref="GeneID:133063758"
ORIGIN      
        1 mnetgqlhgn sedcknlsll cydetdtivn pvkinfdlqe qctknaakel aqfyyvdeld
       61 gklacvnkct pgtksemdch hgrcqlqqsg prclclnsdt hwysgetces stsksvvygv
      121 vgavaallvi lvvvliflls rsqrklhrqe cdmsrewqda gypgsfents vwegqdlkgd
      181 tfgleniyrn fqpslrsvdp ttelhiqrpt vvttaq
//
LOCUS       XP_061009495            1066 aa            linear   MAM 02-DEC-2023
DEFINITION  mucin-3A [Dama dama].
ACCESSION   XP_061009495
VERSION     XP_061009495.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153512.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1066
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1066
                     /product="mucin-3A"
                     /calculated_mol_wt=111661
     Region          193..>399
                     /region_name="Chi1"
                     /note="Chitinase [Carbohydrate transport and metabolism];
                     COG3469"
                     /db_xref="CDD:442692"
     Region          <300..>640
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          742..836
                     /region_name="SEA"
                     /note="SEA domain; cl02507"
                     /db_xref="CDD:470595"
     CDS             1..1066
                     /gene="MUC3A"
                     /coded_by="XM_061153512.1:242..3442"
                     /db_xref="GeneID:133063759"
ORIGIN      
        1 mttitpttvh ntviltsstt ysttgtatsa ftaslpvsti vqtsttvpps svsteastlt
       61 pattsststn pvgsstfkpd lsstlvlsss slpttdiips sptthntgtt sniittlatr
      121 psgtsmfpst qstatpflst sisaaslgps fvptsstwtt qadsttssal stsnsmqeta
      181 ettlaptttd tytyqsssmg lsstaastqt aktrdttlla sstlrstvtp igtvsveslt
      241 tditslspit tsvtqtstvh vqtspvstpv tsstltassl pvsfpsfptt epvptettdt
      301 tplftlptip atqatstpsp ltgtftttrt evptptytsp patlitasls tpsttevvkt
      361 gtsnmvtppt sitalstsgv spssafpils tstnaistpf gtiisssipa itisslssts
      421 pssetsttss sfstssqass teitgpssit tfptfsstet trtsptmtsl itsptrtttm
      481 ltlssttpcp esisvtivsa spttpcievg pdtdvtstpt vplsvftstt ematspsstt
      541 mttlfpvkpd tstsflethp tnqtaapgsi stgttpistv fpstqrsttg twistsfvtt
      601 prvtgfttlp ptvkpsssss ssivttsklt apsptigsts gipagttktl stvtssrtts
      661 tttqtttqsr qtttpglshd qgqswpelpl facypecdng gtwtqdhcsc lstfsgpkcq
      721 faveeinmdk vdaevgmevs vnqefspdln dnsskvykdf tkafqdqikk iyqnvqgfke
      781 vqilslrngs ivveylvlle lpfstqleke yekvkvalke elqnvsqdgd ncqndqvlcf
      841 kpdsikvnna trmelspeai crraaakgye dfyfpfleen qlrcvtncta gvegaidchq
      901 gqcvlpksgp scrcfstdth wfsgprceva iswkalvggl agagalllll llvalsvfvv
      961 rsrrrdrqgq grddrkwfet wdentagtfs nsgfeddine enfpvaldtv dtnatvrgrg
     1021 wvdgkelsqv qllmplsqgr gltgpggsdl larplkgdsl fslpvl
//
LOCUS       XP_061009496             876 aa            linear   MAM 02-DEC-2023
DEFINITION  serrate RNA effector molecule homolog isoform X1 [Dama dama].
ACCESSION   XP_061009496
VERSION     XP_061009496.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153513.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..876
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..876
                     /product="serrate RNA effector molecule homolog isoform
                     X1"
                     /calculated_mol_wt=100337
     Region          153..262
                     /region_name="SERRATE_Ars2_N"
                     /note="SERRATE/Ars2, N-terminal domain; pfam12066"
                     /db_xref="CDD:463453"
     Region          646..851
                     /region_name="ARS2"
                     /note="Arsenite-resistance protein 2; pfam04959"
                     /db_xref="CDD:461498"
     CDS             1..876
                     /gene="SRRT"
                     /coded_by="XM_061153513.1:349..2979"
                     /db_xref="GeneID:133063760"
ORIGIN      
        1 mgdsddeydr rrrdkfrrer sdydrsrerd errrgddwnd rewdrgrerr srgeyrdydr
       61 nrrerfsppr helsppqkrm rrdwdehssd pyhsgyempy agggggpayg ppqpwghpdv
      121 hivqhpvlpi qarlgsiaei dlgvpppvmk tfkefllsld davdeteavk ryndykldfr
      181 rqqmqdffla hkdeewfrsk yhpdevgkrr qeargalqnr lrvflslmes gwfdnllldi
      241 dkadaivkml daavikmegg tendlrileq eeeeeqagkp gdpskkeegr vgpglgdger
      301 kanekddkre dgkqaendgs sddktkkseg dgdkdekked tekeakkssk krnrkhsgdd
      361 sfdegsvses esesesgqae eekeeadetl kekekpkeee rekpkdapgl eckprplhkt
      421 cslfmrniap nisraeiisl ckrypgfmrv alsepqperr ffrrgwvtfd rsvnikeicw
      481 nlqnirlrec elspgvnrdl trrvrningi tqhkqivrnd iklaaklvht lddrtqlwap
      541 epgtpalpas lpsqnpilkn itdylieevs aeeeellgss ggappeeppk egnpaeinve
      601 rdeklikvld klllylrivh sldyyntcey pnedempnrc giihvrgpmp pnrishgevl
      661 ewqktfeekl tpllsvresl seeeaqkmgr kdpeqevekf vtsntqelgk dkwlcplsgk
      721 kfkgpefvrk hifnkhaeki eevkkevaff nnfltdakrp alpeikpaqp pgpaqilppg
      781 ltpglpyphq tpqglmpygq prppilgyga gavrpavptg gppyphapyg agrgnydafr
      841 gqggypgkpr nrmvrgdpra iveyrdldap ddvdff
//
LOCUS       XP_061009497             876 aa            linear   MAM 02-DEC-2023
DEFINITION  serrate RNA effector molecule homolog isoform X1 [Dama dama].
ACCESSION   XP_061009497
VERSION     XP_061009497.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153514.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..876
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..876
                     /product="serrate RNA effector molecule homolog isoform
                     X1"
                     /calculated_mol_wt=100337
     Region          153..262
                     /region_name="SERRATE_Ars2_N"
                     /note="SERRATE/Ars2, N-terminal domain; pfam12066"
                     /db_xref="CDD:463453"
     Region          646..851
                     /region_name="ARS2"
                     /note="Arsenite-resistance protein 2; pfam04959"
                     /db_xref="CDD:461498"
     CDS             1..876
                     /gene="SRRT"
                     /coded_by="XM_061153514.1:275..2905"
                     /db_xref="GeneID:133063760"
ORIGIN      
        1 mgdsddeydr rrrdkfrrer sdydrsrerd errrgddwnd rewdrgrerr srgeyrdydr
       61 nrrerfsppr helsppqkrm rrdwdehssd pyhsgyempy agggggpayg ppqpwghpdv
      121 hivqhpvlpi qarlgsiaei dlgvpppvmk tfkefllsld davdeteavk ryndykldfr
      181 rqqmqdffla hkdeewfrsk yhpdevgkrr qeargalqnr lrvflslmes gwfdnllldi
      241 dkadaivkml daavikmegg tendlrileq eeeeeqagkp gdpskkeegr vgpglgdger
      301 kanekddkre dgkqaendgs sddktkkseg dgdkdekked tekeakkssk krnrkhsgdd
      361 sfdegsvses esesesgqae eekeeadetl kekekpkeee rekpkdapgl eckprplhkt
      421 cslfmrniap nisraeiisl ckrypgfmrv alsepqperr ffrrgwvtfd rsvnikeicw
      481 nlqnirlrec elspgvnrdl trrvrningi tqhkqivrnd iklaaklvht lddrtqlwap
      541 epgtpalpas lpsqnpilkn itdylieevs aeeeellgss ggappeeppk egnpaeinve
      601 rdeklikvld klllylrivh sldyyntcey pnedempnrc giihvrgpmp pnrishgevl
      661 ewqktfeekl tpllsvresl seeeaqkmgr kdpeqevekf vtsntqelgk dkwlcplsgk
      721 kfkgpefvrk hifnkhaeki eevkkevaff nnfltdakrp alpeikpaqp pgpaqilppg
      781 ltpglpyphq tpqglmpygq prppilgyga gavrpavptg gppyphapyg agrgnydafr
      841 gqggypgkpr nrmvrgdpra iveyrdldap ddvdff
//
LOCUS       XP_061009498             872 aa            linear   MAM 02-DEC-2023
DEFINITION  serrate RNA effector molecule homolog isoform X2 [Dama dama].
ACCESSION   XP_061009498
VERSION     XP_061009498.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153515.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..872
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..872
                     /product="serrate RNA effector molecule homolog isoform
                     X2"
                     /calculated_mol_wt=99946
     Region          153..262
                     /region_name="SERRATE_Ars2_N"
                     /note="SERRATE/Ars2, N-terminal domain; pfam12066"
                     /db_xref="CDD:463453"
     Region          646..847
                     /region_name="ARS2"
                     /note="Arsenite-resistance protein 2; pfam04959"
                     /db_xref="CDD:461498"
     CDS             1..872
                     /gene="SRRT"
                     /coded_by="XM_061153515.1:350..2968"
                     /db_xref="GeneID:133063760"
ORIGIN      
        1 mgdsddeydr rrrdkfrrer sdydrsrerd errrgddwnd rewdrgrerr srgeyrdydr
       61 nrrerfsppr helsppqkrm rrdwdehssd pyhsgyempy agggggpayg ppqpwghpdv
      121 hivqhpvlpi qarlgsiaei dlgvpppvmk tfkefllsld davdeteavk ryndykldfr
      181 rqqmqdffla hkdeewfrsk yhpdevgkrr qeargalqnr lrvflslmes gwfdnllldi
      241 dkadaivkml daavikmegg tendlrileq eeeeeqagkp gdpskkeegr vgpglgdger
      301 kanekddkre dgkqaendgs sddktkkseg dgdkdekked tekeakkssk krnrkhsgdd
      361 sfdegsvses esesesgqae eekeeadetl kekekpkeee rekpkdapgl eckprplhkt
      421 cslfmrniap nisraeiisl ckrypgfmrv alsepqperr ffrrgwvtfd rsvnikeicw
      481 nlqnirlrec elspgvnrdl trrvrningi tqhkqivrnd iklaaklvht lddrtqlwap
      541 epgtpalpas lpsqnpilkn itdylieevs aeeeellgss ggappeeppk egnpaeinve
      601 rdeklikvld klllylrivh sldyyntcey pnedempnrc giihvrgpmp pnrishgevl
      661 ewqktfeekl tpllsvresl seeeaqkmgr kdpeqevekf vtsntqelgk dkwlcplsgk
      721 kfkgpefvrk hifnkhaeki eevkkevaff nnfltdakrp alpeikpaqp pgpaqsltpg
      781 lpyphqtpqg lmpygqprpp ilgygagavr pavptggppy phapygagrg nydafrgqgg
      841 ypgkprnrmv rgdpraivey rdldapddvd ff
//
LOCUS       XP_061009499             852 aa            linear   MAM 02-DEC-2023
DEFINITION  serrate RNA effector molecule homolog isoform X3 [Dama dama].
ACCESSION   XP_061009499
VERSION     XP_061009499.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153516.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..852
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..852
                     /product="serrate RNA effector molecule homolog isoform
                     X3"
                     /calculated_mol_wt=97542
     Region          153..262
                     /region_name="SERRATE_Ars2_N"
                     /note="SERRATE/Ars2, N-terminal domain; pfam12066"
                     /db_xref="CDD:463453"
     Region          646..851
                     /region_name="ARS2"
                     /note="Arsenite-resistance protein 2; pfam04959"
                     /db_xref="CDD:461498"
     CDS             1..852
                     /gene="SRRT"
                     /coded_by="XM_061153516.1:349..2907"
                     /db_xref="GeneID:133063760"
ORIGIN      
        1 mgdsddeydr rrrdkfrrer sdydrsrerd errrgddwnd rewdrgrerr srgeyrdydr
       61 nrrerfsppr helsppqkrm rrdwdehssd pyhsgyempy agggggpayg ppqpwghpdv
      121 hivqhpvlpi qarlgsiaei dlgvpppvmk tfkefllsld davdeteavk ryndykldfr
      181 rqqmqdffla hkdeewfrsk yhpdevgkrr qeargalqnr lrvflslmes gwfdnllldi
      241 dkadaivkml daavikmegg tendlrileq eeeeeqagkp gdpskkeegr vgpglgdger
      301 kanekddkre dgkqaendgs sddktkkseg dgdkdekked tekeakkssk krnrkhsgdd
      361 sfdegsvses esesesgqae eekeeadetl kekekpkeee rekpkdapgl eckprplhkt
      421 cslfmrniap nisraeiisl ckrypgfmrv alsepqperr ffrrgwvtfd rsvnikeicw
      481 nlqnirlrec elspgvnrdl trrvrningi tqhkqivrnd iklaaklvht lddrtqlwap
      541 epgtpalpas lpsqnpilkn itdylieevs aeeeellgss ggappeeppk egnpaeinve
      601 rdeklikvld klllylrivh sldyyntcey pnedempnrc giihvrgpmp pnrishgevl
      661 ewqktfeekl tpllsvresl seeeaqkmgr kdpeqevekf vtsntqelgk dkwlcplsgk
      721 kfkgpefvrk hifnkhaeki eevkkevaff nnfltdakrp alpeikpaqp pgpaqilppg
      781 ltpglpyphq tpqglmpygq prppilgyga gavrpavptg gppyphapyg agrgnydafr
      841 gqggypgkpr nr
//
LOCUS       XP_061009501             685 aa            linear   MAM 02-DEC-2023
DEFINITION  acetylcholinesterase isoform X1 [Dama dama].
ACCESSION   XP_061009501
VERSION     XP_061009501.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153518.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..685
                     /product="acetylcholinesterase isoform X1"
                     /calculated_mol_wt=74125
     Region          126..632
                     /region_name="COesterase"
                     /note="Carboxylesterase family; pfam00135"
                     /db_xref="CDD:395084"
     Site            order(220..222,302..304,307,462,466..467,502,548,551)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:238191"
     Site            order(303,434,547)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238191"
     CDS             1..685
                     /gene="ACHE"
                     /coded_by="XM_061153518.1:1..2058"
                     /db_xref="GeneID:133063761"
ORIGIN      
        1 mpnpypsrar pwptageaap srhlkfphra ppvsegpapv gglqpvvavp plgpgrstgg
       61 rsrrlpalaa mrppwcplht pslaspllll lfflgggaea egpedpellv mvrggrlrgl
      121 rlmaprgpvs aflgipfaep pvgprrflpp epkrpwpgvl natafqsvcy qyvdtlypgf
      181 egtemwnpnr elsedclyln vwtpyprpss ptpvlvwiyg ggfysgassl dvydgrfltq
      241 aegtvlvsmn yrvgafgfla lpgsreapgn vglldqrlal qwvqenvaaf ggdptsvtlf
      301 gesagaasvg mhllsppsrg lfhravlqsg apngpwatvg vgearrratl larlvgcppg
      361 gaggndtelv aclrmrpaqd lvdhewhvlp qesvfrfsfv pvvdgdflsd tpealinagd
      421 fhglqvlvgv vkdegsyflv ygapgfskdn eslisraqfl agvrvgvpqa sdlaaeavvl
      481 hytdwlhped parlrealsd vvgdhnvvcp vaqlagrlaa qgarvyayif ehrastlswp
      541 lwmgvphgye iefifglple pslnytieer tfaqrlmryw anfartgdpn dprdpkapqw
      601 ppytagaqqy vslnlrplev rrglraqaca fwnrflpkll sataseapct csgpahgeaa
      661 prprpglplp lllllfllls rllrl
//
LOCUS       XP_061009502             684 aa            linear   MAM 02-DEC-2023
DEFINITION  acetylcholinesterase isoform X2 [Dama dama].
ACCESSION   XP_061009502
VERSION     XP_061009502.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153519.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..684
                     /product="acetylcholinesterase isoform X2"
                     /calculated_mol_wt=74038
     Region          125..631
                     /region_name="COesterase"
                     /note="Carboxylesterase family; pfam00135"
                     /db_xref="CDD:395084"
     Site            order(219..221,301..303,306,461,465..466,501,547,550)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:238191"
     Site            order(302,433,546)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238191"
     CDS             1..684
                     /gene="ACHE"
                     /coded_by="XM_061153519.1:1..2055"
                     /db_xref="GeneID:133063761"
ORIGIN      
        1 mpnpypsrar pwptageaap srhlkfphra ppvsegpapv gglqpvvavp plgpgrstgg
       61 rrrlpalaam rppwcplhtp slasplllll fflgggaeae gpedpellvm vrggrlrglr
      121 lmaprgpvsa flgipfaepp vgprrflppe pkrpwpgvln atafqsvcyq yvdtlypgfe
      181 gtemwnpnre lsedclylnv wtpyprpssp tpvlvwiygg gfysgassld vydgrfltqa
      241 egtvlvsmny rvgafgflal pgsreapgnv glldqrlalq wvqenvaafg gdptsvtlfg
      301 esagaasvgm hllsppsrgl fhravlqsga pngpwatvgv gearrratll arlvgcppgg
      361 aggndtelva clrmrpaqdl vdhewhvlpq esvfrfsfvp vvdgdflsdt pealinagdf
      421 hglqvlvgvv kdegsyflvy gapgfskdne slisraqfla gvrvgvpqas dlaaeavvlh
      481 ytdwlhpedp arlrealsdv vgdhnvvcpv aqlagrlaaq garvyayife hrastlswpl
      541 wmgvphgyei efifglplep slnytieert faqrlmrywa nfartgdpnd prdpkapqwp
      601 pytagaqqyv slnlrplevr rglraqacaf wnrflpklls ataseapctc sgpahgeaap
      661 rprpglplpl llllflllsr llrl
//
LOCUS       XP_061009503             683 aa            linear   MAM 02-DEC-2023
DEFINITION  acetylcholinesterase isoform X3 [Dama dama].
ACCESSION   XP_061009503
VERSION     XP_061009503.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153520.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..683
                     /product="acetylcholinesterase isoform X3"
                     /calculated_mol_wt=74768
     Region          126..632
                     /region_name="COesterase"
                     /note="Carboxylesterase family; pfam00135"
                     /db_xref="CDD:395084"
     Site            order(220..222,302..304,307,462,466..467,502,548,551)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:238191"
     Site            order(303,434,547)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238191"
     Region          647..680
                     /region_name="AChE_tetra"
                     /note="Acetylcholinesterase tetramerization domain;
                     pfam08674"
                     /db_xref="CDD:430146"
     CDS             1..683
                     /gene="ACHE"
                     /coded_by="XM_061153520.1:1..2052"
                     /db_xref="GeneID:133063761"
ORIGIN      
        1 mpnpypsrar pwptageaap srhlkfphra ppvsegpapv gglqpvvavp plgpgrstgg
       61 rsrrlpalaa mrppwcplht pslaspllll lfflgggaea egpedpellv mvrggrlrgl
      121 rlmaprgpvs aflgipfaep pvgprrflpp epkrpwpgvl natafqsvcy qyvdtlypgf
      181 egtemwnpnr elsedclyln vwtpyprpss ptpvlvwiyg ggfysgassl dvydgrfltq
      241 aegtvlvsmn yrvgafgfla lpgsreapgn vglldqrlal qwvqenvaaf ggdptsvtlf
      301 gesagaasvg mhllsppsrg lfhravlqsg apngpwatvg vgearrratl larlvgcppg
      361 gaggndtelv aclrmrpaqd lvdhewhvlp qesvfrfsfv pvvdgdflsd tpealinagd
      421 fhglqvlvgv vkdegsyflv ygapgfskdn eslisraqfl agvrvgvpqa sdlaaeavvl
      481 hytdwlhped parlrealsd vvgdhnvvcp vaqlagrlaa qgarvyayif ehrastlswp
      541 lwmgvphgye iefifglple pslnytieer tfaqrlmryw anfartgdpn dprdpkapqw
      601 ppytagaqqy vslnlrplev rrglraqaca fwnrflpkll satdtldeae rqwkaefhrw
      661 ssymvhwknq fdhyskqdrc sdl
//
LOCUS       XP_061009504             615 aa            linear   MAM 02-DEC-2023
DEFINITION  acetylcholinesterase isoform X4 [Dama dama].
ACCESSION   XP_061009504
VERSION     XP_061009504.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153521.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..615
                     /product="acetylcholinesterase isoform X4"
                     /calculated_mol_wt=66925
     Region          56..562
                     /region_name="COesterase"
                     /note="Carboxylesterase family; pfam00135"
                     /db_xref="CDD:395084"
     Site            order(150..152,232..234,237,392,396..397,432,478,481)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:238191"
     Site            order(233,364,477)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238191"
     CDS             1..615
                     /gene="ACHE"
                     /coded_by="XM_061153521.1:96..1943"
                     /db_xref="GeneID:133063761"
ORIGIN      
        1 mrppwcplht pslaspllll lfflgggaea egpedpellv mvrggrlrgl rlmaprgpvs
       61 aflgipfaep pvgprrflpp epkrpwpgvl natafqsvcy qyvdtlypgf egtemwnpnr
      121 elsedclyln vwtpyprpss ptpvlvwiyg ggfysgassl dvydgrfltq aegtvlvsmn
      181 yrvgafgfla lpgsreapgn vglldqrlal qwvqenvaaf ggdptsvtlf gesagaasvg
      241 mhllsppsrg lfhravlqsg apngpwatvg vgearrratl larlvgcppg gaggndtelv
      301 aclrmrpaqd lvdhewhvlp qesvfrfsfv pvvdgdflsd tpealinagd fhglqvlvgv
      361 vkdegsyflv ygapgfskdn eslisraqfl agvrvgvpqa sdlaaeavvl hytdwlhped
      421 parlrealsd vvgdhnvvcp vaqlagrlaa qgarvyayif ehrastlswp lwmgvphgye
      481 iefifglple pslnytieer tfaqrlmryw anfartgdpn dprdpkapqw ppytagaqqy
      541 vslnlrplev rrglraqaca fwnrflpkll sataseapct csgpahgeaa prprpglplp
      601 lllllfllls rllrl
//
LOCUS       XP_061009505             615 aa            linear   MAM 02-DEC-2023
DEFINITION  acetylcholinesterase isoform X4 [Dama dama].
ACCESSION   XP_061009505
VERSION     XP_061009505.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153522.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..615
                     /product="acetylcholinesterase isoform X4"
                     /calculated_mol_wt=66925
     Region          56..562
                     /region_name="COesterase"
                     /note="Carboxylesterase family; pfam00135"
                     /db_xref="CDD:395084"
     Site            order(150..152,232..234,237,392,396..397,432,478,481)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:238191"
     Site            order(233,364,477)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238191"
     CDS             1..615
                     /gene="ACHE"
                     /coded_by="XM_061153522.1:109..1956"
                     /db_xref="GeneID:133063761"
ORIGIN      
        1 mrppwcplht pslaspllll lfflgggaea egpedpellv mvrggrlrgl rlmaprgpvs
       61 aflgipfaep pvgprrflpp epkrpwpgvl natafqsvcy qyvdtlypgf egtemwnpnr
      121 elsedclyln vwtpyprpss ptpvlvwiyg ggfysgassl dvydgrfltq aegtvlvsmn
      181 yrvgafgfla lpgsreapgn vglldqrlal qwvqenvaaf ggdptsvtlf gesagaasvg
      241 mhllsppsrg lfhravlqsg apngpwatvg vgearrratl larlvgcppg gaggndtelv
      301 aclrmrpaqd lvdhewhvlp qesvfrfsfv pvvdgdflsd tpealinagd fhglqvlvgv
      361 vkdegsyflv ygapgfskdn eslisraqfl agvrvgvpqa sdlaaeavvl hytdwlhped
      421 parlrealsd vvgdhnvvcp vaqlagrlaa qgarvyayif ehrastlswp lwmgvphgye
      481 iefifglple pslnytieer tfaqrlmryw anfartgdpn dprdpkapqw ppytagaqqy
      541 vslnlrplev rrglraqaca fwnrflpkll sataseapct csgpahgeaa prprpglplp
      601 lllllfllls rllrl
//
LOCUS       XP_061009506             597 aa            linear   MAM 02-DEC-2023
DEFINITION  acetylcholinesterase isoform X5 [Dama dama].
ACCESSION   XP_061009506
VERSION     XP_061009506.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153523.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..597
                     /product="acetylcholinesterase isoform X5"
                     /calculated_mol_wt=64711
     Region          126..544
                     /region_name="COesterase"
                     /note="Carboxylesterase family; pfam00135"
                     /db_xref="CDD:395084"
     CDS             1..597
                     /gene="ACHE"
                     /coded_by="XM_061153523.1:1..1794"
                     /db_xref="GeneID:133063761"
ORIGIN      
        1 mpnpypsrar pwptageaap srhlkfphra ppvsegpapv gglqpvvavp plgpgrstgg
       61 rsrrlpalaa mrppwcplht pslaspllll lfflgggaea egpedpellv mvrggrlrgl
      121 rlmaprgpvs aflgipfaep pvgprrflpp epkrpwpgvl natafqsvcy qyvdtlypgf
      181 egtemwnpnr elsedclyln vwtpyprpss ptpvlvwiyg ggfysgassl dvydgrfltq
      241 aegtvlvsmn yrvgafgfla lpgsreapgn vglldqrlal qwvqenvaaf ggdptsvtlf
      301 gesagaasvg mhllsppsrg lfhravlqsg apngpwatvg vgearrratl larlvgcppg
      361 gaggndtelv aclrmrpaqd lvdhewhvlp qesvfrfsfv pvvdgdflsd tpealinagd
      421 fhglqlagrl aaqgarvyay ifehrastls wplwmgvphg yeiefifglp lepslnytie
      481 ertfaqrlmr ywanfartgd pndprdpkap qwppytagaq qyvslnlrpl evrrglraqa
      541 cafwnrflpk llsataseap ctcsgpahge aaprprpglp lplllllfll lsrllrl
//
LOCUS       XP_061009507             595 aa            linear   MAM 02-DEC-2023
DEFINITION  acetylcholinesterase isoform X6 [Dama dama].
ACCESSION   XP_061009507
VERSION     XP_061009507.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153524.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..595
                     /product="acetylcholinesterase isoform X6"
                     /calculated_mol_wt=65354
     Region          126..544
                     /region_name="COesterase"
                     /note="Carboxylesterase family; pfam00135"
                     /db_xref="CDD:395084"
     Region          559..592
                     /region_name="AChE_tetra"
                     /note="Acetylcholinesterase tetramerization domain;
                     pfam08674"
                     /db_xref="CDD:430146"
     CDS             1..595
                     /gene="ACHE"
                     /coded_by="XM_061153524.1:1..1788"
                     /db_xref="GeneID:133063761"
ORIGIN      
        1 mpnpypsrar pwptageaap srhlkfphra ppvsegpapv gglqpvvavp plgpgrstgg
       61 rsrrlpalaa mrppwcplht pslaspllll lfflgggaea egpedpellv mvrggrlrgl
      121 rlmaprgpvs aflgipfaep pvgprrflpp epkrpwpgvl natafqsvcy qyvdtlypgf
      181 egtemwnpnr elsedclyln vwtpyprpss ptpvlvwiyg ggfysgassl dvydgrfltq
      241 aegtvlvsmn yrvgafgfla lpgsreapgn vglldqrlal qwvqenvaaf ggdptsvtlf
      301 gesagaasvg mhllsppsrg lfhravlqsg apngpwatvg vgearrratl larlvgcppg
      361 gaggndtelv aclrmrpaqd lvdhewhvlp qesvfrfsfv pvvdgdflsd tpealinagd
      421 fhglqlagrl aaqgarvyay ifehrastls wplwmgvphg yeiefifglp lepslnytie
      481 ertfaqrlmr ywanfartgd pndprdpkap qwppytagaq qyvslnlrpl evrrglraqa
      541 cafwnrflpk llsatdtlde aerqwkaefh rwssymvhwk nqfdhyskqd rcsdl
//
LOCUS       XP_061009508             615 aa            linear   MAM 02-DEC-2023
DEFINITION  acetylcholinesterase isoform X4 [Dama dama].
ACCESSION   XP_061009508
VERSION     XP_061009508.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153525.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..615
                     /product="acetylcholinesterase isoform X4"
                     /calculated_mol_wt=66925
     Region          56..562
                     /region_name="COesterase"
                     /note="Carboxylesterase family; pfam00135"
                     /db_xref="CDD:395084"
     Site            order(150..152,232..234,237,392,396..397,432,478,481)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:238191"
     Site            order(233,364,477)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238191"
     CDS             1..615
                     /gene="ACHE"
                     /coded_by="XM_061153525.1:289..2136"
                     /db_xref="GeneID:133063761"
ORIGIN      
        1 mrppwcplht pslaspllll lfflgggaea egpedpellv mvrggrlrgl rlmaprgpvs
       61 aflgipfaep pvgprrflpp epkrpwpgvl natafqsvcy qyvdtlypgf egtemwnpnr
      121 elsedclyln vwtpyprpss ptpvlvwiyg ggfysgassl dvydgrfltq aegtvlvsmn
      181 yrvgafgfla lpgsreapgn vglldqrlal qwvqenvaaf ggdptsvtlf gesagaasvg
      241 mhllsppsrg lfhravlqsg apngpwatvg vgearrratl larlvgcppg gaggndtelv
      301 aclrmrpaqd lvdhewhvlp qesvfrfsfv pvvdgdflsd tpealinagd fhglqvlvgv
      361 vkdegsyflv ygapgfskdn eslisraqfl agvrvgvpqa sdlaaeavvl hytdwlhped
      421 parlrealsd vvgdhnvvcp vaqlagrlaa qgarvyayif ehrastlswp lwmgvphgye
      481 iefifglple pslnytieer tfaqrlmryw anfartgdpn dprdpkapqw ppytagaqqy
      541 vslnlrplev rrglraqaca fwnrflpkll sataseapct csgpahgeaa prprpglplp
      601 lllllfllls rllrl
//
LOCUS       XP_061009509             157 aa            linear   MAM 02-DEC-2023
DEFINITION  inactive Ufm1-specific protease 1 [Dama dama].
ACCESSION   XP_061009509
VERSION     XP_061009509.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153526.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..157
                     /product="inactive Ufm1-specific protease 1"
                     /calculated_mol_wt=16350
     Region          <2..143
                     /region_name="Peptidase_C78"
                     /note="Peptidase family C78; pfam07910"
                     /db_xref="CDD:400318"
     CDS             1..157
                     /gene="UFSP1"
                     /coded_by="XM_061153526.1:529..1002"
                     /db_xref="GeneID:133063762"
ORIGIN      
        1 mgvpelgavq aaledmgdkp pgfrgsqswi gcveaslcld hfggpqgrlc hvprgaglqg
       61 elerlyshfa ggggpvmvgg dadaqskall gvclgpgtea yvlvldphcw gapknpselq
      121 aagwvgwqev stafdphsfy nlcmtscnsk eqnhtld
//
LOCUS       XP_061009511             914 aa            linear   MAM 02-DEC-2023
DEFINITION  solute carrier family 12 member 9 isoform X1 [Dama dama].
ACCESSION   XP_061009511
VERSION     XP_061009511.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153528.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..914
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..914
                     /product="solute carrier family 12 member 9 isoform X1"
                     /calculated_mol_wt=96174
     Region          36..905
                     /region_name="AA_permease_2"
                     /note="Amino acid permease; cl45918"
                     /db_xref="CDD:459263"
     CDS             1..914
                     /gene="SLC12A9"
                     /coded_by="XM_061153528.1:188..2932"
                     /db_xref="GeneID:133063763"
ORIGIN      
        1 masensplla yrllgeegvs fpangaggpa gaparklstf lgvvvptvls mfsivvflri
       61 gfvvghagll qalamllvay vilaltvlsv caiatngavr gggayfmisr tlgpevggsi
      121 glmfylanvc gcavsllglv eaildvfgad asgssglrvl pqgygwslly gslllglvgg
      181 vctlgaglya rasfltfllv sgslasvlvs fvavgprdip laprpgpngs slppqvghft
      241 gfnsstlkan ldagyakdyt tgammtfasv favlfngctg imaganmsge lkdpsraipl
      301 gtivavaytf fiyillffls sftcdrvllq edygffrais lwpplvlvgi yatslsasms
      361 sligasrilh alaqddlfgv vlapakvvsr ggnpwgavly swglvqlvll agklntlaav
      421 vtvfylvaya avdlsclsle wasapnfrpt fnlfswhtcl lgvascllmm flispgaagg
      481 slllmgllsa lltarggpss wgyvsqallf hqvrkyllrl dvrkdhvkfw rpqllllvgn
      541 prgtlpllrl anqlkkggly vlghvtlgdl dslpsdpvqp qygawlslvd raqvkafvdl
      601 tlspsvrqga qhllrisglg gmkpntlvlg fyddaapqdh fltdpafsep adgtqeagap
      661 alstlfpppr apgspralsp qdyvatvada lkmnknvvla racgalpper lsrgsggtsq
      721 lhhvdvwpln llrprggpgy vdvcglfllq matilgmvpa whsarlrifl clgpreapga
      781 aegrlralls qlriraevre vvwgegaase eqeeeeegdf vngrrgdaea ealacsanal
      841 vraqqgrgrg gpggpeegdg evgpttaltf lylprppads arylrylall eilsrdlgpt
      901 llihgvtpvt ctdl
//
LOCUS       XP_061009512             869 aa            linear   MAM 02-DEC-2023
DEFINITION  solute carrier family 12 member 9 isoform X2 [Dama dama].
ACCESSION   XP_061009512
VERSION     XP_061009512.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153529.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..869
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..869
                     /product="solute carrier family 12 member 9 isoform X2"
                     /calculated_mol_wt=91729
     Region          36..860
                     /region_name="AA_permease_2"
                     /note="Amino acid permease; cl45918"
                     /db_xref="CDD:459263"
     CDS             1..869
                     /gene="SLC12A9"
                     /coded_by="XM_061153529.1:58..2667"
                     /db_xref="GeneID:133063763"
ORIGIN      
        1 masensplla yrllgeegvs fpangaggpa gaparklstf lgvvvptvls mfsivvflri
       61 vmisrtlgpe vggsiglmfy lanvcgcavs llglveaild vfgadasgss glrvlpqgyg
      121 wsllygslll glvggvctlg aglyarasfl tfllvsgsla svlvsfvavg prdiplaprp
      181 gpngsslppq vghftgfnss tlkanldagy akdyttgamm tfasvfavlf ngctgimaga
      241 nmsgelkdps raiplgtiva vaytffiyil lfflssftcd rvllqedygf fraislwppl
      301 vlvgiyatsl sasmssliga srilhalaqd dlfgvvlapa kvvsrggnpw gavlyswglv
      361 qlvllagkln tlaavvtvfy lvayaavdls clslewasap nfrptfnlfs whtcllgvas
      421 cllmmflisp gaaggslllm gllsalltar ggpsswgyvs qallfhqvrk yllrldvrkd
      481 hvkfwrpqll llvgnprgtl pllrlanqlk kgglyvlghv tlgdldslps dpvqpqygaw
      541 lslvdraqvk afvdltlsps vrqgaqhllr isglggmkpn tlvlgfydda apqdhfltdp
      601 afsepadgtq eagapalstl fppprapgsp ralspqdyva tvadalkmnk nvvlaracga
      661 lpperlsrgs ggtsqlhhvd vwplnllrpr ggpgyvdvcg lfllqmatil gmvpawhsar
      721 lriflclgpr eapgaaegrl rallsqlrir aevrevvwge gaaseeqeee eegdfvngrr
      781 gdaeaealac sanalvraqq grgrggpggp eegdgevgpt taltflylpr ppadsarylr
      841 ylalleilsr dlgptllihg vtpvtctdl
//
LOCUS       XP_061009513             914 aa            linear   MAM 02-DEC-2023
DEFINITION  solute carrier family 12 member 9 isoform X1 [Dama dama].
ACCESSION   XP_061009513
VERSION     XP_061009513.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153530.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..914
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..914
                     /product="solute carrier family 12 member 9 isoform X1"
                     /calculated_mol_wt=96174
     Region          36..905
                     /region_name="AA_permease_2"
                     /note="Amino acid permease; cl45918"
                     /db_xref="CDD:459263"
     CDS             1..914
                     /gene="SLC12A9"
                     /coded_by="XM_061153530.1:184..2928"
                     /db_xref="GeneID:133063763"
ORIGIN      
        1 masensplla yrllgeegvs fpangaggpa gaparklstf lgvvvptvls mfsivvflri
       61 gfvvghagll qalamllvay vilaltvlsv caiatngavr gggayfmisr tlgpevggsi
      121 glmfylanvc gcavsllglv eaildvfgad asgssglrvl pqgygwslly gslllglvgg
      181 vctlgaglya rasfltfllv sgslasvlvs fvavgprdip laprpgpngs slppqvghft
      241 gfnsstlkan ldagyakdyt tgammtfasv favlfngctg imaganmsge lkdpsraipl
      301 gtivavaytf fiyillffls sftcdrvllq edygffrais lwpplvlvgi yatslsasms
      361 sligasrilh alaqddlfgv vlapakvvsr ggnpwgavly swglvqlvll agklntlaav
      421 vtvfylvaya avdlsclsle wasapnfrpt fnlfswhtcl lgvascllmm flispgaagg
      481 slllmgllsa lltarggpss wgyvsqallf hqvrkyllrl dvrkdhvkfw rpqllllvgn
      541 prgtlpllrl anqlkkggly vlghvtlgdl dslpsdpvqp qygawlslvd raqvkafvdl
      601 tlspsvrqga qhllrisglg gmkpntlvlg fyddaapqdh fltdpafsep adgtqeagap
      661 alstlfpppr apgspralsp qdyvatvada lkmnknvvla racgalpper lsrgsggtsq
      721 lhhvdvwpln llrprggpgy vdvcglfllq matilgmvpa whsarlrifl clgpreapga
      781 aegrlralls qlriraevre vvwgegaase eqeeeeegdf vngrrgdaea ealacsanal
      841 vraqqgrgrg gpggpeegdg evgpttaltf lylprppads arylrylall eilsrdlgpt
      901 llihgvtpvt ctdl
//
LOCUS       XP_061009514             914 aa            linear   MAM 02-DEC-2023
DEFINITION  solute carrier family 12 member 9 isoform X1 [Dama dama].
ACCESSION   XP_061009514
VERSION     XP_061009514.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153531.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..914
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..914
                     /product="solute carrier family 12 member 9 isoform X1"
                     /calculated_mol_wt=96174
     Region          36..905
                     /region_name="AA_permease_2"
                     /note="Amino acid permease; cl45918"
                     /db_xref="CDD:459263"
     CDS             1..914
                     /gene="SLC12A9"
                     /coded_by="XM_061153531.1:193..2937"
                     /db_xref="GeneID:133063763"
ORIGIN      
        1 masensplla yrllgeegvs fpangaggpa gaparklstf lgvvvptvls mfsivvflri
       61 gfvvghagll qalamllvay vilaltvlsv caiatngavr gggayfmisr tlgpevggsi
      121 glmfylanvc gcavsllglv eaildvfgad asgssglrvl pqgygwslly gslllglvgg
      181 vctlgaglya rasfltfllv sgslasvlvs fvavgprdip laprpgpngs slppqvghft
      241 gfnsstlkan ldagyakdyt tgammtfasv favlfngctg imaganmsge lkdpsraipl
      301 gtivavaytf fiyillffls sftcdrvllq edygffrais lwpplvlvgi yatslsasms
      361 sligasrilh alaqddlfgv vlapakvvsr ggnpwgavly swglvqlvll agklntlaav
      421 vtvfylvaya avdlsclsle wasapnfrpt fnlfswhtcl lgvascllmm flispgaagg
      481 slllmgllsa lltarggpss wgyvsqallf hqvrkyllrl dvrkdhvkfw rpqllllvgn
      541 prgtlpllrl anqlkkggly vlghvtlgdl dslpsdpvqp qygawlslvd raqvkafvdl
      601 tlspsvrqga qhllrisglg gmkpntlvlg fyddaapqdh fltdpafsep adgtqeagap
      661 alstlfpppr apgspralsp qdyvatvada lkmnknvvla racgalpper lsrgsggtsq
      721 lhhvdvwpln llrprggpgy vdvcglfllq matilgmvpa whsarlrifl clgpreapga
      781 aegrlralls qlriraevre vvwgegaase eqeeeeegdf vngrrgdaea ealacsanal
      841 vraqqgrgrg gpggpeegdg evgpttaltf lylprppads arylrylall eilsrdlgpt
      901 llihgvtpvt ctdl
//
LOCUS       XP_061009515             914 aa            linear   MAM 02-DEC-2023
DEFINITION  solute carrier family 12 member 9 isoform X1 [Dama dama].
ACCESSION   XP_061009515
VERSION     XP_061009515.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153532.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..914
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..914
                     /product="solute carrier family 12 member 9 isoform X1"
                     /calculated_mol_wt=96174
     Region          36..905
                     /region_name="AA_permease_2"
                     /note="Amino acid permease; cl45918"
                     /db_xref="CDD:459263"
     CDS             1..914
                     /gene="SLC12A9"
                     /coded_by="XM_061153532.1:168..2912"
                     /db_xref="GeneID:133063763"
ORIGIN      
        1 masensplla yrllgeegvs fpangaggpa gaparklstf lgvvvptvls mfsivvflri
       61 gfvvghagll qalamllvay vilaltvlsv caiatngavr gggayfmisr tlgpevggsi
      121 glmfylanvc gcavsllglv eaildvfgad asgssglrvl pqgygwslly gslllglvgg
      181 vctlgaglya rasfltfllv sgslasvlvs fvavgprdip laprpgpngs slppqvghft
      241 gfnsstlkan ldagyakdyt tgammtfasv favlfngctg imaganmsge lkdpsraipl
      301 gtivavaytf fiyillffls sftcdrvllq edygffrais lwpplvlvgi yatslsasms
      361 sligasrilh alaqddlfgv vlapakvvsr ggnpwgavly swglvqlvll agklntlaav
      421 vtvfylvaya avdlsclsle wasapnfrpt fnlfswhtcl lgvascllmm flispgaagg
      481 slllmgllsa lltarggpss wgyvsqallf hqvrkyllrl dvrkdhvkfw rpqllllvgn
      541 prgtlpllrl anqlkkggly vlghvtlgdl dslpsdpvqp qygawlslvd raqvkafvdl
      601 tlspsvrqga qhllrisglg gmkpntlvlg fyddaapqdh fltdpafsep adgtqeagap
      661 alstlfpppr apgspralsp qdyvatvada lkmnknvvla racgalpper lsrgsggtsq
      721 lhhvdvwpln llrprggpgy vdvcglfllq matilgmvpa whsarlrifl clgpreapga
      781 aegrlralls qlriraevre vvwgegaase eqeeeeegdf vngrrgdaea ealacsanal
      841 vraqqgrgrg gpggpeegdg evgpttaltf lylprppads arylrylall eilsrdlgpt
      901 llihgvtpvt ctdl
//
LOCUS       XP_061009516             988 aa            linear   MAM 02-DEC-2023
DEFINITION  ephrin type-B receptor 4 [Dama dama].
ACCESSION   XP_061009516
VERSION     XP_061009516.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153533.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..988
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..988
                     /product="ephrin type-B receptor 4"
                     /calculated_mol_wt=108265
     Region          17..197
                     /region_name="EphR_LBD_B4"
                     /note="Ligand Binding Domain of Ephrin type-B Receptor 4;
                     cd10474"
                     /db_xref="CDD:198442"
     Site            order(27,29,44..47,49..51,53,55,57,60..61,94,96,148,150,
                     156..158,160,185..187,189)
                     /site_type="other"
                     /note="ephrin binding site [polypeptide binding]"
                     /db_xref="CDD:198442"
     Region          <322..>515
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          435..527
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(435,500,515)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(516..517,519..520)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          <565..613
                     /region_name="EphA2_TM"
                     /note="Ephrin type-A receptor 2 transmembrane domain;
                     pfam14575"
                     /db_xref="CDD:464211"
     Region          611..879
                     /region_name="PTKc_EphR_B"
                     /note="Catalytic domain of the Protein Tyrosine Kinases,
                     Class EphB Ephrin Receptors; cd05065"
                     /db_xref="CDD:173638"
     Site            order(622..626,630,646,648,694..695,697,701,741,745..746,
                     748,759,780..784,793,827)
                     /site_type="active"
                     /db_xref="CDD:173638"
     Site            order(622..624,626,630,646,648,694..695,697,701,746,748,
                     759)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:173638"
     Site            order(741,745,780..784,793,827)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:173638"
     Site            758..786
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:173638"
     Region          908..974
                     /region_name="SAM_EPH-B4"
                     /note="SAM domain of EPH-B4 subfamily of tyrosine kinase
                     receptors; cd09554"
                     /db_xref="CDD:188953"
     Site            order(925,958)
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:188953"
     CDS             1..988
                     /gene="EPHB4"
                     /coded_by="XM_061153533.1:132..3098"
                     /db_xref="GeneID:133063764"
ORIGIN      
        1 melrallcwa slaaaleetl lntkletadl kwvtfpqvds gqweelsgld eeqhsvrtye
       61 vcdlqrapgl ahwlrtgwvp rrgavhvyat lrftmlecls lpragrscke tftvfyfesd
      121 adtatahtpa wmenpyikvd tvaaehltrk rpgaeatgkv nvktlrlgpl tkagfylafq
      181 dqgacmalls lhlfykkcaq qtvnltyfpe tvprelvvpv agscvadamp apgpspslyc
      241 redgqwaeqp vtgcscnagf eaaegntkcr acaqgtfkpl sgegscqpcp anshsnalgs
      301 sicqcrigyf rastdprsap cttppsaprs vvprlngsal rlewsaples ggredltyal
      361 rcrecrpggs ctpcggdltf dpgprdlvep wvairglrpd vtytfevtal ngvsslasgp
      421 vpfeavnvtt drevpppvsd irvtrsspss lslawavpra psgavldyev kyhekgaegp
      481 ssvrflktse nraelrglkr gasylvqvra rseagygpfg qehhsqtqld eneswreqla
      541 liagtavvgv llvfvvivia vlclrkqssg reaeysdkhg qylighgtkv yidpftyedp
      601 neavrefake idvsyvkiee vigagefgev crgrlkapgk kescvaiktl kggyterqrr
      661 eflseasimg qfehpniirl egvvtnsvpv miltefmeng aldsflrlnd gqftviqlvg
      721 mlrgiasgmr ylaemsyvhr dlaarnilvn snlvckvsdf glsrfleens sdptytsslg
      781 gkipirwtap eaiafrkfts asdawsygiv mwevmsfger pywdmsnqdv inaieqdyrl
      841 ppppdcptsl hqlmldcwqk drnarprfpq vvsaldkmir npaslkivar enggashpll
      901 dqrqphysaf gsvgewlrai kmgryeesfa aagfgsfelv sqistedllr igvtlaghqk
      961 kilasvqhmk sqakpgapgg sgapapqy
//
LOCUS       XP_061009517             481 aa            linear   MAM 02-DEC-2023
DEFINITION  thyroid receptor-interacting protein 6 [Dama dama].
ACCESSION   XP_061009517
VERSION     XP_061009517.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153534.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..481
                     /product="thyroid receptor-interacting protein 6"
                     /calculated_mol_wt=50487
     Region          <8..257
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          284..337
                     /region_name="LIM1_TRIP6"
                     /note="The first LIM domain of Thyroid
                     receptor-interacting protein 6 (TRIP6); cd09350"
                     /db_xref="CDD:188736"
     Site            order(284,287,306,309,312,315,333,336)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188736"
     Region          344..403
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Site            order(344,347,364,367,370,373,392,395)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:259829"
     Region          404..466
                     /region_name="LIM3_Zyxin_like"
                     /note="The third LIM domain of Zyxin-like family; cd09357"
                     /db_xref="CDD:188743"
     Site            order(404,407,431,434,437,440,462,465)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188743"
     CDS             1..481
                     /gene="TRIP6"
                     /coded_by="XM_061153534.1:166..1611"
                     /db_xref="GeneID:133063765"
ORIGIN      
        1 msgptwlppk qpeparapqg ralprgasgp ppahgaglqp hprlnfcplp seqcyqtpgg
       61 pedrglawvg chgapqhsqs fppdrgglrp gsldaeidsl tsmlaeldgg rghaprrpdr
      121 qayeppeppa yrsgsgplrp nggalpppsl pgppyggptp asyatastpa gpafpvqvkv
      181 aqpvrgcgpp rrgasqasgp spgphfplpg rgevwgagyr shrepgpgak eeaagvsgpa
      241 ggrgggygsq vppsqppeee lerltkklvh dmnhppsgey fgrcggcged vvgdgagvva
      301 ldrvfhvacf vcaacraqlr gqhfyavdrr aycescyvat lekcstcsqp ildrilramg
      361 kayhpgcftc vvchrgldgi pftvdatsqi hciedfhrkf aprcsvcgga impepgqeet
      421 vrivaldrsf higcykceec glllssegec qgcypldghi lckacsawqi qelsatvttd
      481 c
//
LOCUS       XP_061009518            1033 aa            linear   MAM 02-DEC-2023
DEFINITION  GRB10-interacting GYF protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061009518
VERSION     XP_061009518.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153535.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1033
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1033
                     /product="GRB10-interacting GYF protein 1 isoform X1"
                     /calculated_mol_wt=114210
     Region          477..530
                     /region_name="GYF"
                     /note="GYF domain: contains conserved Gly-Tyr-Phe
                     residues; Proline-binding domain in CD2-binding and other
                     proteins. Involved in signaling lymphocyte activity. Also
                     present in other unrelated proteins (mainly unknown)
                     derived from diverse eukaryotic species; cd00072"
                     /db_xref="CDD:238027"
     Site            489..505
                     /site_type="active"
                     /note="proline binding motif [active]"
                     /db_xref="CDD:238027"
     Site            order(499,504..505)
                     /site_type="active"
                     /note="proline interaction residues [active]"
                     /db_xref="CDD:238027"
     CDS             1..1033
                     /gene="GIGYF1"
                     /coded_by="XM_061153535.1:669..3770"
                     /db_xref="GeneID:133063766"
ORIGIN      
        1 maaetlnfgp ewlralssgg svaspppspa mpkykladyr ygreemlaly vkeskvpdel
       61 qdkefaallq eeplqplale plteeeqrnf slsvnsvavl rlmgkgagpp lggasrgrgs
      121 trsrgrgrgd scfyqrsiee gegafgrnpr eiqrsqswdd rgerrfeksa rrdgarsgfd
      181 eggagprkeh arsdsenwrs lreeqeeeee gswrlgagpr rdgdrwrsts pdggprsagw
      241 rehgdrrrkf efdlrgdrgg cgeeegrggg gsshlrrcrg pdgfdddkdg lpewcldded
      301 eemgtfdasg aflplkkgpk epipeeqeld fqgleeeeee psegldeegp eaggkeltpl
      361 ppqeeksssp splptlgplw gangegddpv ekdlpaaegd dmrgmqlspg agsppgppdl
      421 eddeglkhlq qeaeklvasl qdssleeeqf taaiqaqglr hsaaatalpl shgaarkwfy
      481 kdpqgeiqgp fttqemaewf qagyfsmall vkrgcdegfq plgevikmwg rvpfapgpsp
      541 ppllgnldqe rlkkqqelaa aalyqqlqhq qflqlvgsrq lpqcvlreka algdlpppqq
      601 qqltaflqql qalkpprggd qnllptmnrs lsvpdsgslw dihtsaspqs ggeaslwdip
      661 insstqgpil eqlqlqhkfq errevelrak reeeerkrre ekrrqqqqqq eeqkrrqeee
      721 elfrrkqvrq qelllkllqq qqqaaaavpv ppapsspppl waglakqgls mktllelqle
      781 gerhlhkqpp prepsraqap nhrvqlgglg aaplnqwvse agplwggpdk sggssglglw
      841 edtlkssgsl arslglknsr sspslsdsys hlsgrpvrkk teeeekllkl lqgiprpqdg
      901 ftqwceqmlh tlsttgsldv pmavailkev espydvhdyi rsclgdtlea kefakqfler
      961 rakqkasqqr qqqeawlssg slqtafqtnh stklgpgegs kakrralmlh sdpsilgysl
     1021 hgpsgeiesv ddy
//
LOCUS       XP_061009520            1033 aa            linear   MAM 02-DEC-2023
DEFINITION  GRB10-interacting GYF protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061009520
VERSION     XP_061009520.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153537.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1033
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1033
                     /product="GRB10-interacting GYF protein 1 isoform X1"
                     /calculated_mol_wt=114210
     Region          477..530
                     /region_name="GYF"
                     /note="GYF domain: contains conserved Gly-Tyr-Phe
                     residues; Proline-binding domain in CD2-binding and other
                     proteins. Involved in signaling lymphocyte activity. Also
                     present in other unrelated proteins (mainly unknown)
                     derived from diverse eukaryotic species; cd00072"
                     /db_xref="CDD:238027"
     Site            489..505
                     /site_type="active"
                     /note="proline binding motif [active]"
                     /db_xref="CDD:238027"
     Site            order(499,504..505)
                     /site_type="active"
                     /note="proline interaction residues [active]"
                     /db_xref="CDD:238027"
     CDS             1..1033
                     /gene="GIGYF1"
                     /coded_by="XM_061153537.1:847..3948"
                     /db_xref="GeneID:133063766"
ORIGIN      
        1 maaetlnfgp ewlralssgg svaspppspa mpkykladyr ygreemlaly vkeskvpdel
       61 qdkefaallq eeplqplale plteeeqrnf slsvnsvavl rlmgkgagpp lggasrgrgs
      121 trsrgrgrgd scfyqrsiee gegafgrnpr eiqrsqswdd rgerrfeksa rrdgarsgfd
      181 eggagprkeh arsdsenwrs lreeqeeeee gswrlgagpr rdgdrwrsts pdggprsagw
      241 rehgdrrrkf efdlrgdrgg cgeeegrggg gsshlrrcrg pdgfdddkdg lpewcldded
      301 eemgtfdasg aflplkkgpk epipeeqeld fqgleeeeee psegldeegp eaggkeltpl
      361 ppqeeksssp splptlgplw gangegddpv ekdlpaaegd dmrgmqlspg agsppgppdl
      421 eddeglkhlq qeaeklvasl qdssleeeqf taaiqaqglr hsaaatalpl shgaarkwfy
      481 kdpqgeiqgp fttqemaewf qagyfsmall vkrgcdegfq plgevikmwg rvpfapgpsp
      541 ppllgnldqe rlkkqqelaa aalyqqlqhq qflqlvgsrq lpqcvlreka algdlpppqq
      601 qqltaflqql qalkpprggd qnllptmnrs lsvpdsgslw dihtsaspqs ggeaslwdip
      661 insstqgpil eqlqlqhkfq errevelrak reeeerkrre ekrrqqqqqq eeqkrrqeee
      721 elfrrkqvrq qelllkllqq qqqaaaavpv ppapsspppl waglakqgls mktllelqle
      781 gerhlhkqpp prepsraqap nhrvqlgglg aaplnqwvse agplwggpdk sggssglglw
      841 edtlkssgsl arslglknsr sspslsdsys hlsgrpvrkk teeeekllkl lqgiprpqdg
      901 ftqwceqmlh tlsttgsldv pmavailkev espydvhdyi rsclgdtlea kefakqfler
      961 rakqkasqqr qqqeawlssg slqtafqtnh stklgpgegs kakrralmlh sdpsilgysl
     1021 hgpsgeiesv ddy
//
LOCUS       XP_061009521            1033 aa            linear   MAM 02-DEC-2023
DEFINITION  GRB10-interacting GYF protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061009521
VERSION     XP_061009521.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153538.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1033
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1033
                     /product="GRB10-interacting GYF protein 1 isoform X1"
                     /calculated_mol_wt=114210
     Region          477..530
                     /region_name="GYF"
                     /note="GYF domain: contains conserved Gly-Tyr-Phe
                     residues; Proline-binding domain in CD2-binding and other
                     proteins. Involved in signaling lymphocyte activity. Also
                     present in other unrelated proteins (mainly unknown)
                     derived from diverse eukaryotic species; cd00072"
                     /db_xref="CDD:238027"
     Site            489..505
                     /site_type="active"
                     /note="proline binding motif [active]"
                     /db_xref="CDD:238027"
     Site            order(499,504..505)
                     /site_type="active"
                     /note="proline interaction residues [active]"
                     /db_xref="CDD:238027"
     CDS             1..1033
                     /gene="GIGYF1"
                     /coded_by="XM_061153538.1:699..3800"
                     /db_xref="GeneID:133063766"
ORIGIN      
        1 maaetlnfgp ewlralssgg svaspppspa mpkykladyr ygreemlaly vkeskvpdel
       61 qdkefaallq eeplqplale plteeeqrnf slsvnsvavl rlmgkgagpp lggasrgrgs
      121 trsrgrgrgd scfyqrsiee gegafgrnpr eiqrsqswdd rgerrfeksa rrdgarsgfd
      181 eggagprkeh arsdsenwrs lreeqeeeee gswrlgagpr rdgdrwrsts pdggprsagw
      241 rehgdrrrkf efdlrgdrgg cgeeegrggg gsshlrrcrg pdgfdddkdg lpewcldded
      301 eemgtfdasg aflplkkgpk epipeeqeld fqgleeeeee psegldeegp eaggkeltpl
      361 ppqeeksssp splptlgplw gangegddpv ekdlpaaegd dmrgmqlspg agsppgppdl
      421 eddeglkhlq qeaeklvasl qdssleeeqf taaiqaqglr hsaaatalpl shgaarkwfy
      481 kdpqgeiqgp fttqemaewf qagyfsmall vkrgcdegfq plgevikmwg rvpfapgpsp
      541 ppllgnldqe rlkkqqelaa aalyqqlqhq qflqlvgsrq lpqcvlreka algdlpppqq
      601 qqltaflqql qalkpprggd qnllptmnrs lsvpdsgslw dihtsaspqs ggeaslwdip
      661 insstqgpil eqlqlqhkfq errevelrak reeeerkrre ekrrqqqqqq eeqkrrqeee
      721 elfrrkqvrq qelllkllqq qqqaaaavpv ppapsspppl waglakqgls mktllelqle
      781 gerhlhkqpp prepsraqap nhrvqlgglg aaplnqwvse agplwggpdk sggssglglw
      841 edtlkssgsl arslglknsr sspslsdsys hlsgrpvrkk teeeekllkl lqgiprpqdg
      901 ftqwceqmlh tlsttgsldv pmavailkev espydvhdyi rsclgdtlea kefakqfler
      961 rakqkasqqr qqqeawlssg slqtafqtnh stklgpgegs kakrralmlh sdpsilgysl
     1021 hgpsgeiesv ddy
//
LOCUS       XP_061009522            1032 aa            linear   MAM 02-DEC-2023
DEFINITION  GRB10-interacting GYF protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061009522
VERSION     XP_061009522.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153539.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1032
                     /product="GRB10-interacting GYF protein 1 isoform X2"
                     /calculated_mol_wt=114082
     Region          477..530
                     /region_name="GYF"
                     /note="GYF domain: contains conserved Gly-Tyr-Phe
                     residues; Proline-binding domain in CD2-binding and other
                     proteins. Involved in signaling lymphocyte activity. Also
                     present in other unrelated proteins (mainly unknown)
                     derived from diverse eukaryotic species; cd00072"
                     /db_xref="CDD:238027"
     Site            489..505
                     /site_type="active"
                     /note="proline binding motif [active]"
                     /db_xref="CDD:238027"
     Site            order(499,504..505)
                     /site_type="active"
                     /note="proline interaction residues [active]"
                     /db_xref="CDD:238027"
     CDS             1..1032
                     /gene="GIGYF1"
                     /coded_by="XM_061153539.1:784..3882"
                     /db_xref="GeneID:133063766"
ORIGIN      
        1 maaetlnfgp ewlralssgg svaspppspa mpkykladyr ygreemlaly vkeskvpdel
       61 qdkefaallq eeplqplale plteeeqrnf slsvnsvavl rlmgkgagpp lggasrgrgs
      121 trsrgrgrgd scfyqrsiee gegafgrnpr eiqrsqswdd rgerrfeksa rrdgarsgfd
      181 eggagprkeh arsdsenwrs lreeqeeeee gswrlgagpr rdgdrwrsts pdggprsagw
      241 rehgdrrrkf efdlrgdrgg cgeeegrggg gsshlrrcrg pdgfdddkdg lpewcldded
      301 eemgtfdasg aflplkkgpk epipeeqeld fqgleeeeee psegldeegp eaggkeltpl
      361 ppqeeksssp splptlgplw gangegddpv ekdlpaaegd dmrgmqlspg agsppgppdl
      421 eddeglkhlq qeaeklvasl qdssleeeqf taaiqaqglr hsaaatalpl shgaarkwfy
      481 kdpqgeiqgp fttqemaewf qagyfsmall vkrgcdegfq plgevikmwg rvpfapgpsp
      541 ppllgnldqe rlkkqqelaa aalyqqlqhq qflqlvgsrq lpqcvlreka algdlpppqq
      601 qqltaflqql qalkpprggd qnllptmnrs lsvpdsgslw dihtsaspqs ggeaslwdip
      661 insstqgpil eqlqlqhkfq errevelrak reeeerkrre ekrrqqqqqq eeqkrrqeee
      721 elfrrkqvrq qelllkllqq qqqaaaavpv ppapsspppl waglakqgls mktllelqle
      781 gerhlhkqpp prepsraqap nhrvlgglga aplnqwvsea gplwggpdks ggssglglwe
      841 dtlkssgsla rslglknsrs spslsdsysh lsgrpvrkkt eeeekllkll qgiprpqdgf
      901 tqwceqmlht lsttgsldvp mavailkeve spydvhdyir sclgdtleak efakqflerr
      961 akqkasqqrq qqeawlssgs lqtafqtnhs tklgpgegsk akrralmlhs dpsilgyslh
     1021 gpsgeiesvd dy
//
LOCUS       XP_061009523            1028 aa            linear   MAM 02-DEC-2023
DEFINITION  GRB10-interacting GYF protein 1 isoform X3 [Dama dama].
ACCESSION   XP_061009523
VERSION     XP_061009523.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153540.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1028
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1028
                     /product="GRB10-interacting GYF protein 1 isoform X3"
                     /calculated_mol_wt=113683
     Region          477..530
                     /region_name="GYF"
                     /note="GYF domain: contains conserved Gly-Tyr-Phe
                     residues; Proline-binding domain in CD2-binding and other
                     proteins. Involved in signaling lymphocyte activity. Also
                     present in other unrelated proteins (mainly unknown)
                     derived from diverse eukaryotic species; cd00072"
                     /db_xref="CDD:238027"
     Site            489..505
                     /site_type="active"
                     /note="proline binding motif [active]"
                     /db_xref="CDD:238027"
     Site            order(499,504..505)
                     /site_type="active"
                     /note="proline interaction residues [active]"
                     /db_xref="CDD:238027"
     CDS             1..1028
                     /gene="GIGYF1"
                     /coded_by="XM_061153540.1:803..3889"
                     /db_xref="GeneID:133063766"
ORIGIN      
        1 maaetlnfgp ewlralssgg svaspppspa mpkykladyr ygreemlaly vkeskvpdel
       61 qdkefaallq eeplqplale plteeeqrnf slsvnsvavl rlmgkgagpp lggasrgrgs
      121 trsrgrgrgd scfyqrsiee gegafgrnpr eiqrsqswdd rgerrfeksa rrdgarsgfd
      181 eggagprkeh arsdsenwrs lreeqeeeee gswrlgagpr rdgdrwrsts pdggprsagw
      241 rehgdrrrkf efdlrgdrgg cgeeegrggg gsshlrrcrg pdgfdddkdg lpewcldded
      301 eemgtfdasg aflplkkgpk epipeeqeld fqgleeeeee psegldeegp eaggkeltpl
      361 ppqeeksssp splptlgplw gangegddpv ekdlpaaegd dmrgmqlspg agsppgppdl
      421 eddeglkhlq qeaeklvasl qdssleeeqf taaiqaqglr hsaaatalpl shgaarkwfy
      481 kdpqgeiqgp fttqemaewf qagyfsmall vkrgcdegfq plgevikmwg rvpfapgpsp
      541 ppllerlkkq qelaaaalyq qlqhqqflql vgsrqlpqcv lrekaalgdl pppqqqqlta
      601 flqqlqalkp prggdqnllp tmnrslsvpd sgslwdihts aspqsggeas lwdipinsst
      661 qgpileqlql qhkfqerrev elrakreeee rkrreekrrq qqqqqeeqkr rqeeeelfrr
      721 kqvrqqelll kllqqqqqaa aavpvppaps sppplwagla kqglsmktll elqlegerhl
      781 hkqpppreps raqapnhrvq lgglgaapln qwvseagplw ggpdksggss glglwedtlk
      841 ssgslarslg lknsrsspsl sdsyshlsgr pvrkkteeee kllkllqgip rpqdgftqwc
      901 eqmlhtlstt gsldvpmava ilkevespyd vhdyirsclg dtleakefak qflerrakqk
      961 asqqrqqqea wlssgslqta fqtnhstklg pgegskakrr almlhsdpsi lgyslhgpsg
     1021 eiesvddy
//
LOCUS       XP_061009524            1008 aa            linear   MAM 02-DEC-2023
DEFINITION  GRB10-interacting GYF protein 1 isoform X4 [Dama dama].
ACCESSION   XP_061009524
VERSION     XP_061009524.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153541.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1008
                     /product="GRB10-interacting GYF protein 1 isoform X4"
                     /calculated_mol_wt=111359
     Region          477..530
                     /region_name="GYF"
                     /note="GYF domain: contains conserved Gly-Tyr-Phe
                     residues; Proline-binding domain in CD2-binding and other
                     proteins. Involved in signaling lymphocyte activity. Also
                     present in other unrelated proteins (mainly unknown)
                     derived from diverse eukaryotic species; cd00072"
                     /db_xref="CDD:238027"
     Site            489..505
                     /site_type="active"
                     /note="proline binding motif [active]"
                     /db_xref="CDD:238027"
     Site            order(499,504..505)
                     /site_type="active"
                     /note="proline interaction residues [active]"
                     /db_xref="CDD:238027"
     CDS             1..1008
                     /gene="GIGYF1"
                     /coded_by="XM_061153541.1:803..3829"
                     /db_xref="GeneID:133063766"
ORIGIN      
        1 maaetlnfgp ewlralssgg svaspppspa mpkykladyr ygreemlaly vkeskvpdel
       61 qdkefaallq eeplqplale plteeeqrnf slsvnsvavl rlmgkgagpp lggasrgrgs
      121 trsrgrgrgd scfyqrsiee gegafgrnpr eiqrsqswdd rgerrfeksa rrdgarsgfd
      181 eggagprkeh arsdsenwrs lreeqeeeee gswrlgagpr rdgdrwrsts pdggprsagw
      241 rehgdrrrkf efdlrgdrgg cgeeegrggg gsshlrrcrg pdgfdddkdg lpewcldded
      301 eemgtfdasg aflplkkgpk epipeeqeld fqgleeeeee psegldeegp eaggkeltpl
      361 ppqeeksssp splptlgplw gangegddpv ekdlpaaegd dmrgmqlspg agsppgppdl
      421 eddeglkhlq qeaeklvasl qdssleeeqf taaiqaqglr hsaaatalpl shgaarkwfy
      481 kdpqgeiqgp fttqemaewf qagyfsmall vkrgcdegfq plgevikmwg rvpfapgpsp
      541 ppllgnldqe rlkkqlpqcv lrekaalgdl pppqqqqlta flqqlqalkp prggdqnllp
      601 tmnrslsvpd sgslwdihts aspqsggeas lwdipinsst qgpileqlql qhkfqerrev
      661 elrakreeee rkrreekrrq qqqqqeeqkr rqeeeelfrr kqvrqqelll kllqqqqqaa
      721 aavpvppaps sppplwagla kqglsmktll elqlegerhl hkqpppreps raqapnhrvq
      781 lgglgaapln qwvseagplw ggpdksggss glglwedtlk ssgslarslg lknsrsspsl
      841 sdsyshlsgr pvrkkteeee kllkllqgip rpqdgftqwc eqmlhtlstt gsldvpmava
      901 ilkevespyd vhdyirsclg dtleakefak qflerrakqk asqqrqqqea wlssgslqta
      961 fqtnhstklg pgegskakrr almlhsdpsi lgyslhgpsg eiesvddy
//
LOCUS       XP_061009525            1003 aa            linear   MAM 02-DEC-2023
DEFINITION  GRB10-interacting GYF protein 1 isoform X5 [Dama dama].
ACCESSION   XP_061009525
VERSION     XP_061009525.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153542.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1003
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1003
                     /product="GRB10-interacting GYF protein 1 isoform X5"
                     /calculated_mol_wt=110832
     Region          477..530
                     /region_name="GYF"
                     /note="GYF domain: contains conserved Gly-Tyr-Phe
                     residues; Proline-binding domain in CD2-binding and other
                     proteins. Involved in signaling lymphocyte activity. Also
                     present in other unrelated proteins (mainly unknown)
                     derived from diverse eukaryotic species; cd00072"
                     /db_xref="CDD:238027"
     Site            489..505
                     /site_type="active"
                     /note="proline binding motif [active]"
                     /db_xref="CDD:238027"
     Site            order(499,504..505)
                     /site_type="active"
                     /note="proline interaction residues [active]"
                     /db_xref="CDD:238027"
     CDS             1..1003
                     /gene="GIGYF1"
                     /coded_by="XM_061153542.1:803..3814"
                     /db_xref="GeneID:133063766"
ORIGIN      
        1 maaetlnfgp ewlralssgg svaspppspa mpkykladyr ygreemlaly vkeskvpdel
       61 qdkefaallq eeplqplale plteeeqrnf slsvnsvavl rlmgkgagpp lggasrgrgs
      121 trsrgrgrgd scfyqrsiee gegafgrnpr eiqrsqswdd rgerrfeksa rrdgarsgfd
      181 eggagprkeh arsdsenwrs lreeqeeeee gswrlgagpr rdgdrwrsts pdggprsagw
      241 rehgdrrrkf efdlrgdrgg cgeeegrggg gsshlrrcrg pdgfdddkdg lpewcldded
      301 eemgtfdasg aflplkkgpk epipeeqeld fqgleeeeee psegldeegp eaggkeltpl
      361 ppqeeksssp splptlgplw gangegddpv ekdlpaaegd dmrgmqlspg agsppgppdl
      421 eddeglkhlq qeaeklvasl qdssleeeqf taaiqaqglr hsaaatalpl shgaarkwfy
      481 kdpqgeiqgp fttqemaewf qagyfsmall vkrgcdegfq plgevikmwg rvpfapgpsp
      541 ppllerlkkq lpqcvlreka algdlpppqq qqltaflqql qalkpprggd qnllptmnrs
      601 lsvpdsgslw dihtsaspqs ggeaslwdip insstqgpil eqlqlqhkfq errevelrak
      661 reeeerkrre ekrrqqqqqq eeqkrrqeee elfrrkqvrq qelllkllqq qqqaaaavpv
      721 ppapsspppl waglakqgls mktllelqle gerhlhkqpp prepsraqap nhrvqlgglg
      781 aaplnqwvse agplwggpdk sggssglglw edtlkssgsl arslglknsr sspslsdsys
      841 hlsgrpvrkk teeeekllkl lqgiprpqdg ftqwceqmlh tlsttgsldv pmavailkev
      901 espydvhdyi rsclgdtlea kefakqfler rakqkasqqr qqqeawlssg slqtafqtnh
      961 stklgpgegs kakrralmlh sdpsilgysl hgpsgeiesv ddy
//
LOCUS       XP_061009526             340 aa            linear   MAM 02-DEC-2023
DEFINITION  guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2
            [Dama dama].
ACCESSION   XP_061009526
VERSION     XP_061009526.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153543.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..340
                     /product="guanine nucleotide-binding protein
                     G(I)/G(S)/G(T) subunit beta-2"
                     /calculated_mol_wt=37200
     Region          48..340
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(54,72,76,82..83,90..91,114,118,124..125,141..142,
                     159,163,169..170,183,200,205,211..212,224..225,243,247,
                     253..254,265..266,286,291,297..298,310..311,329,333,
                     339..340)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          58..95
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          101..141
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          146..181
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          188..223
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          229..265
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          273..309
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          315..339
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..340
                     /gene="GNB2"
                     /coded_by="XM_061153543.1:247..1269"
                     /db_xref="GeneID:133063767"
ORIGIN      
        1 mseleqlrqe aeqlrnqird arkacgdstl tqitagldpv griqmrtrrt lrghlakiya
       61 mhwgtdsrll vsasqdgkli iwdsyttnkv haiplrsswv mtcayapsgn fvacggldni
      121 csiyslktre gnvrvsrelp ghtgylsccr flddnqiits sgdttcalwd ietgqqtvgf
      181 aghsgdvmsl slapdgrtfv sgacdasikl wdvrdsmcrq tfighesdin avaffpngya
      241 fttgsddatc rlfdlradqe llmyshdnii cgitsvafsr sgrlllagyd dfncniwdam
      301 kgdragvlag hdnrvsclgv tddgmavatg swdsflkiwn
//
LOCUS       XP_061009527             803 aa            linear   MAM 02-DEC-2023
DEFINITION  transferrin receptor protein 2 [Dama dama].
ACCESSION   XP_061009527
VERSION     XP_061009527.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153544.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..803
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..803
                     /product="transferrin receptor protein 2"
                     /calculated_mol_wt=88410
     Region          211..396
                     /region_name="PA_TfR"
                     /note="Protease-associated domain containing proteins like
                     transferrin receptor (TfR). This group contains various PA
                     domain-containing proteins similar to human TfR1 and TfR2.
                     TfR1 and TfR2 are type II membrane proteins, belonging to
                     the peptidase M28 family; cd02128"
                     /db_xref="CDD:239043"
     Site            order(303,317..320,322,326..329,332,334..336)
                     /site_type="other"
                     /note="PA/protease-like domain interface [polypeptide
                     binding]"
                     /db_xref="CDD:239043"
     Site            order(327,333)
                     /site_type="other"
                     /note="PA/helical domain interface [polypeptide binding]"
                     /db_xref="CDD:239043"
     Site            order(332,335)
                     /site_type="other"
                     /note="Ca2+ binding [ion binding]"
                     /db_xref="CDD:239043"
     Site            order(336,338,342..343)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:239043"
     Region          409..642
                     /region_name="M28_TfR"
                     /note="M28 Zn-peptidase Transferrin Receptor family;
                     cd09848"
                     /db_xref="CDD:349946"
     Site            order(416,418,421,423..424,426,470,472,489,492..500)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:349946"
     Region          669..793
                     /region_name="TFR_dimer"
                     /note="Transferrin receptor-like dimerization domain;
                     pfam04253"
                     /db_xref="CDD:461238"
     CDS             1..803
                     /gene="TFR2"
                     /coded_by="XM_061153544.1:64..2475"
                     /db_xref="GeneID:133063768"
ORIGIN      
        1 merlggllrr aqrlspgpsq tiykrvegtq qgrleeeeed geegaeppah ffpmelrgpe
       61 plgsrparqn pglweaagrr aapylvltal liftgafllg yvafrgscqa cgddvmvvse
      121 dlndelspds hqgtlywsdl qamflrflge ghledtirqt slrervagsa gmaalaqdir
      181 aellrqrldh vwmdthyvgl qfpdparpnt lhwvdasgkh geqlpledpd vycpysatgn
      241 atgklvyahy grpedlqdlr argvepagrl llvrlgvinf aqkvasaqdf gaqgvliypd
      301 padfsqgphk lslsshravy ghvhlgtgdp ytpgfpsfnq tqfppvqssg lpsipaqpis
      361 adiaslllrk legpvapqew qghlpvspyr lgpgpglhlg vnnhrastpi snifgciegr
      421 sepdqyvvig aqrdawgpga aksavgtail lelvrtfssm vsngfqprrs llfiswdggd
      481 fgsvgsmewl egylsvlhlk avvyvsldna vlgddkfhak tspllislie nilkqvdspn
      541 rsgqtlyeqv vvtnhsweae virplpmdss aysftafagv pavefsfmed gpaypflhtk
      601 ddtyenlhkv lrgrlpavaq avaqlagqll irlshdhllp ldfgrygdvv lrhigslnef
      661 sgdlkarglt lqwvysargd yiraaeklrk eiysseesde rlmrmynvri mrvefyflsq
      721 yvspadspfr hiflgrgdht lralldhvrl lraggpgats sqvarglgfq esrfrrqlal
      781 ltwtlqgaan alsgdvwnid nnf
//
LOCUS       XP_061009528             803 aa            linear   MAM 02-DEC-2023
DEFINITION  transferrin receptor protein 2 [Dama dama].
ACCESSION   XP_061009528
VERSION     XP_061009528.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153545.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..803
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..803
                     /product="transferrin receptor protein 2"
                     /calculated_mol_wt=88410
     Region          211..396
                     /region_name="PA_TfR"
                     /note="Protease-associated domain containing proteins like
                     transferrin receptor (TfR). This group contains various PA
                     domain-containing proteins similar to human TfR1 and TfR2.
                     TfR1 and TfR2 are type II membrane proteins, belonging to
                     the peptidase M28 family; cd02128"
                     /db_xref="CDD:239043"
     Site            order(303,317..320,322,326..329,332,334..336)
                     /site_type="other"
                     /note="PA/protease-like domain interface [polypeptide
                     binding]"
                     /db_xref="CDD:239043"
     Site            order(327,333)
                     /site_type="other"
                     /note="PA/helical domain interface [polypeptide binding]"
                     /db_xref="CDD:239043"
     Site            order(332,335)
                     /site_type="other"
                     /note="Ca2+ binding [ion binding]"
                     /db_xref="CDD:239043"
     Site            order(336,338,342..343)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:239043"
     Region          409..642
                     /region_name="M28_TfR"
                     /note="M28 Zn-peptidase Transferrin Receptor family;
                     cd09848"
                     /db_xref="CDD:349946"
     Site            order(416,418,421,423..424,426,470,472,489,492..500)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:349946"
     Region          669..793
                     /region_name="TFR_dimer"
                     /note="Transferrin receptor-like dimerization domain;
                     pfam04253"
                     /db_xref="CDD:461238"
     CDS             1..803
                     /gene="TFR2"
                     /coded_by="XM_061153545.1:241..2652"
                     /db_xref="GeneID:133063768"
ORIGIN      
        1 merlggllrr aqrlspgpsq tiykrvegtq qgrleeeeed geegaeppah ffpmelrgpe
       61 plgsrparqn pglweaagrr aapylvltal liftgafllg yvafrgscqa cgddvmvvse
      121 dlndelspds hqgtlywsdl qamflrflge ghledtirqt slrervagsa gmaalaqdir
      181 aellrqrldh vwmdthyvgl qfpdparpnt lhwvdasgkh geqlpledpd vycpysatgn
      241 atgklvyahy grpedlqdlr argvepagrl llvrlgvinf aqkvasaqdf gaqgvliypd
      301 padfsqgphk lslsshravy ghvhlgtgdp ytpgfpsfnq tqfppvqssg lpsipaqpis
      361 adiaslllrk legpvapqew qghlpvspyr lgpgpglhlg vnnhrastpi snifgciegr
      421 sepdqyvvig aqrdawgpga aksavgtail lelvrtfssm vsngfqprrs llfiswdggd
      481 fgsvgsmewl egylsvlhlk avvyvsldna vlgddkfhak tspllislie nilkqvdspn
      541 rsgqtlyeqv vvtnhsweae virplpmdss aysftafagv pavefsfmed gpaypflhtk
      601 ddtyenlhkv lrgrlpavaq avaqlagqll irlshdhllp ldfgrygdvv lrhigslnef
      661 sgdlkarglt lqwvysargd yiraaeklrk eiysseesde rlmrmynvri mrvefyflsq
      721 yvspadspfr hiflgrgdht lralldhvrl lraggpgats sqvarglgfq esrfrrqlal
      781 ltwtlqgaan alsgdvwnid nnf
//
LOCUS       XP_061009530             688 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat and calponin homology domain-containing protein
            4 isoform X1 [Dama dama].
ACCESSION   XP_061009530
VERSION     XP_061009530.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153547.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..688
                     /product="leucine-rich repeat and calponin homology
                     domain-containing protein 4 isoform X1"
                     /calculated_mol_wt=73680
     Region          46..69
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <65..>241
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          70..92
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          93..115
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          116..131
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          138..160
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          161..183
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          184..204
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          206..228
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          229..247
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <370..>509
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          541..647
                     /region_name="CH_LRCH4"
                     /note="calponin homology (CH) domain found in leucine-rich
                     repeat and calponin homology domain-containing protein 4;
                     cd21273"
                     /db_xref="CDD:409122"
     Site            order(541,545,604,606..607,610..611,613,623..631,635,
                     637..638,640..641,644..645)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409122"
     CDS             1..688
                     /gene="LRCH4"
                     /coded_by="XM_061153547.1:49..2115"
                     /db_xref="GeneID:133063769"
ORIGIN      
        1 maaavaapla aggeeaaatt svpgspglpg srsaeralee avatgtlnls nrrlkhfprg
       61 aarsydlsdi tqadlsrnrf pevpeaacql vsleglslyh nclrclnpal gnltaltyln
      121 lsrnqlsslp pyicqlplrv livsnnklga lppdisalgs lrqldvssne lqalpaelcs
      181 lptlrdlnvr rnqlstlpde lgdlplvrld fscnrvsrip vsfcrlrhlq villdsnplq
      241 sppaqiclkg klhifkylst eagrrggsal gdlapsrpps fspcpaedlf pgrrydggld
      301 sgfhsvdsgs krwsgnestd efselsfris elareprgpr erredgsadg dpeqidfids
      361 hvpgedeerg tgeeprppes spvagdgera pssrreepag eerrrpdtlq lwqererrqq
      421 qqsavwgapr kdsflklgvr aagggpaass sqaafngtsr ssgtqlgasg gqgaptptpa
      481 pastsqeppl psgpatapap rplssiqrpn sflfrsssqs ssgpsspdtv lrprrspqll
      541 dekevmaqlr qvlesqlqrp lpddlaeala ngvilcqlan qlrprsvpfi hvpspavpkl
      601 salksrknve sfleacrkmg vpeadlcsps dllqgtaqgl rttleavtrv vgrappppwp
      661 psglggfilf yvvlmlllcv vytrllgs
//
LOCUS       XP_061009531             657 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat and calponin homology domain-containing protein
            4 isoform X2 [Dama dama].
ACCESSION   XP_061009531
VERSION     XP_061009531.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153548.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..657
                     /product="leucine-rich repeat and calponin homology
                     domain-containing protein 4 isoform X2"
                     /calculated_mol_wt=70500
     Region          46..69
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <65..>241
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          70..92
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          93..115
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          116..131
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          138..160
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          161..183
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          184..204
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          206..228
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          229..247
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <370..>509
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          544..655
                     /region_name="CH_LRCH"
                     /note="calponin homology (CH) domain found in the
                     leucine-rich repeat and calponin homology
                     domain-containing protein family; cd21205"
                     /db_xref="CDD:409054"
     Site            order(545,549,604,606..607,610..611,613,623..631,642,
                     644..645,647..648,651..652,655)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409054"
     CDS             1..657
                     /gene="LRCH4"
                     /coded_by="XM_061153548.1:47..2020"
                     /db_xref="GeneID:133063769"
ORIGIN      
        1 maaavaapla aggeeaaatt svpgspglpg srsaeralee avatgtlnls nrrlkhfprg
       61 aarsydlsdi tqadlsrnrf pevpeaacql vsleglslyh nclrclnpal gnltaltyln
      121 lsrnqlsslp pyicqlplrv livsnnklga lppdisalgs lrqldvssne lqalpaelcs
      181 lptlrdlnvr rnqlstlpde lgdlplvrld fscnrvsrip vsfcrlrhlq villdsnplq
      241 sppaqiclkg klhifkylst eagrrggsal gdlapsrpps fspcpaedlf pgrrydggld
      301 sgfhsvdsgs krwsgnestd efselsfris elareprgpr erredgsadg dpeqidfids
      361 hvpgedeerg tgeeprppes spvagdgera pssrreepag eerrrpdtlq lwqererrqq
      421 qqsavwgapr kdsflklgvr aagggpaass sqaafngtsr ssgtqlgasg gqgaptptpa
      481 pastsqeppl psgpatapap rplssiqrpn sflfrsssqs ssgpsspdtv lrprrspqll
      541 dekevmaqlr qvlesqlqrp lpddlaeala ngvilcqlan qlrprsvpfi hvpspavpkl
      601 salksrknve sfleacrkmg vpeeslcqph hileeegapg rglpyiaavi hallerp
//
LOCUS       XP_061009532             451 aa            linear   MAM 02-DEC-2023
DEFINITION  procollagen C-endopeptidase enhancer 1 [Dama dama].
ACCESSION   XP_061009532
VERSION     XP_061009532.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153549.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..451
                     /product="procollagen C-endopeptidase enhancer 1"
                     /calculated_mol_wt=48000
     Region          38..148
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(46,48,50,77,82,120,144,146,148)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          160..273
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(168,170,172,200,205,244,268,270,272..273)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          321..445
                     /region_name="NTR_PCOLCE"
                     /note="NTR domain, PCOLCE subfamily; Procollagen
                     C-endopeptidase enhancers (PCOLCEs) are extracellular
                     matrix proteins that enhance the activity of procollagen
                     C-proteases, by binding to the procollagen I C-peptide.
                     They contain a C-terminal NTR domain, which...; cd03576"
                     /db_xref="CDD:239631"
     CDS             1..451
                     /gene="PCOLCE"
                     /coded_by="XM_061153549.1:127..1482"
                     /db_xref="GeneID:133063770"
ORIGIN      
        1 mlpaatasll gplltawall lpfthgqtpn ytrpvflcgg dvtgesgyva segfpnlypp
       61 nkeciwtitv pksqtvslsf rvfdleqhps crydaleifa gsgtsgqqlg rfcgtfrpap
      121 lvasgnqvtl rmrsdegtgg rgfllwysgr atsgtehqfc ggrlekaqgt lttpnwpesd
      181 yppgiscswh iiappdqvis ltfgkfdlep dsycrydsvs vfngpvsdda krlgkfcgdt
      241 vpgsitsegn ellvqfvsdl svtadgfsat yrtqprgate ggpgevgpgp kpgagpkvkp
      301 evppeekpka apkaeatpvg pdapsvtcpk qcrrtgtlqs hfcnsdlvvt gmiksmvrgp
      361 gegltatvnv tgvykaggld lpspptdtll kfyvpckqcp pmkkgisyll mgqvdknrgp
      421 ilppesfvvl hrptqhqilt nlgrkcpskp v
//
LOCUS       XP_061009533             347 aa            linear   MAM 02-DEC-2023
DEFINITION  histone deacetylase complex subunit SAP25 isoform X1 [Dama dama].
ACCESSION   XP_061009533
VERSION     XP_061009533.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153550.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..347
                     /product="histone deacetylase complex subunit SAP25
                     isoform X1"
                     /calculated_mol_wt=36914
     Region          104..330
                     /region_name="SAP25"
                     /note="Histone deacetylase complex subunit SAP25;
                     pfam15476"
                     /db_xref="CDD:406038"
     CDS             1..347
                     /gene="SAP25"
                     /coded_by="XM_061153550.1:273..1316"
                     /db_xref="GeneID:133063771"
ORIGIN      
        1 mlpwnprrwg ageeqapmer cpsagsglfq awdsgeealv epgtategsp qpwprrlswt
       61 rrlswtrkaq lrprllpgla akhspgtpvp fspqrtwgva psemtplapw dpnyeatagc
      121 rlvwgpscas gisfsgrtly hpsfwplyqa ascrglrpsl aghrcedqvp rgagfpvmcs
      181 edvffldpll prgqrvplyl seapqqvsap aasaspqpsg mafretlpll ssqvmgslkl
      241 llprpimspw llptpssrcs tawlsgpeli altgllqmsq geprpstsga pglpsgppal
      301 vsdhpaasdg sgcshcgeps lpgtpdaegp yllqgqngps tspgrfy
//
LOCUS       XP_061009534             320 aa            linear   MAM 02-DEC-2023
DEFINITION  histone deacetylase complex subunit SAP25 isoform X2 [Dama dama].
ACCESSION   XP_061009534
VERSION     XP_061009534.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153551.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..320
                     /product="histone deacetylase complex subunit SAP25
                     isoform X2"
                     /calculated_mol_wt=34231
     Region          104..303
                     /region_name="SAP25"
                     /note="Histone deacetylase complex subunit SAP25;
                     pfam15476"
                     /db_xref="CDD:406038"
     CDS             1..320
                     /gene="SAP25"
                     /coded_by="XM_061153551.1:273..1235"
                     /db_xref="GeneID:133063771"
ORIGIN      
        1 mlpwnprrwg ageeqapmer cpsagsglfq awdsgeealv epgtategsp qpwprrlswt
       61 rrlswtrkaq lrprllpgla akhspgtpvp fspqrtwgva psemtplapw dpnyeatagc
      121 rlvwgpscas gisfsgrtly hpsfwplyqa ascrglrpsl aghrcedqvp rgagfpvmcs
      181 edvffldpll prgqrvplyl seapqqvmgs lklllprpim spwllptpss rcstawlsgp
      241 elialtgllq msqgeprpst sgapglpsgp palvsdhpaa sdgsgcshcg epslpgtpda
      301 egpyllqgqn gpstspgrfy
//
LOCUS       XP_061009535             254 aa            linear   MAM 02-DEC-2023
DEFINITION  motile sperm domain-containing protein 3 isoform X1 [Dama dama].
ACCESSION   XP_061009535
VERSION     XP_061009535.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153552.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..254
                     /product="motile sperm domain-containing protein 3 isoform
                     X1"
                     /calculated_mol_wt=28090
     Region          61..152
                     /region_name="Motile_Sperm"
                     /note="MSP (Major sperm protein) domain; pfam00635"
                     /db_xref="CDD:459882"
     CDS             1..254
                     /gene="MOSPD3"
                     /coded_by="XM_061153552.1:16..780"
                     /db_xref="GeneID:133063772"
ORIGIN      
        1 miktvrrkcr sdlperwqpw sghrligrcc dqrprplssa lgcstaqslh apwgapgpga
       61 vfradqrsgp rqlltlynpt gavlrfrvlc tapakytvfd aegyvkpqsc idivirhvap
      121 nprhynvqdr frielseegt egrvvgrkdi tsvlrapayp lelqgqsdpt phpephswta
      181 psaaqpfpen phpqlatssf llfllmgtis vaflllplqd elgsqlpqmf hvslgqklva
      241 ayilglltmv flrt
//
LOCUS       XP_061009536             248 aa            linear   MAM 02-DEC-2023
DEFINITION  motile sperm domain-containing protein 3 isoform X2 [Dama dama].
ACCESSION   XP_061009536
VERSION     XP_061009536.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153553.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..248
                     /product="motile sperm domain-containing protein 3 isoform
                     X2"
                     /calculated_mol_wt=26810
     Region          33..133
                     /region_name="Motile_Sperm"
                     /note="MSP (Major sperm protein) domain; pfam00635"
                     /db_xref="CDD:459882"
     CDS             1..248
                     /gene="MOSPD3"
                     /coded_by="XM_061153553.1:157..903"
                     /db_xref="GeneID:133063772"
ORIGIN      
        1 mrrgapqdqe lvgpgapgrg srgapppsgs vvpvlvfppd lvfradqrsg prqlltlynp
       61 tgavlrfrvl ctapakytvf daegyvkpqs cidivirhva pnprhynvqd rfrielseeg
      121 tegrvvgrkd itsvlrapay plelqgqsdp tphpephswt apsaaqpfpe rveagapdgp
      181 cspdphpqla tssfllfllm gtisvaflll plqdelgsql pqmfhvslgq klvaayilgl
      241 ltmvflrt
//
LOCUS       XP_061009537             248 aa            linear   MAM 02-DEC-2023
DEFINITION  motile sperm domain-containing protein 3 isoform X2 [Dama dama].
ACCESSION   XP_061009537
VERSION     XP_061009537.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153554.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..248
                     /product="motile sperm domain-containing protein 3 isoform
                     X2"
                     /calculated_mol_wt=26810
     Region          33..133
                     /region_name="Motile_Sperm"
                     /note="MSP (Major sperm protein) domain; pfam00635"
                     /db_xref="CDD:459882"
     CDS             1..248
                     /gene="MOSPD3"
                     /coded_by="XM_061153554.1:133..879"
                     /db_xref="GeneID:133063772"
ORIGIN      
        1 mrrgapqdqe lvgpgapgrg srgapppsgs vvpvlvfppd lvfradqrsg prqlltlynp
       61 tgavlrfrvl ctapakytvf daegyvkpqs cidivirhva pnprhynvqd rfrielseeg
      121 tegrvvgrkd itsvlrapay plelqgqsdp tphpephswt apsaaqpfpe rveagapdgp
      181 cspdphpqla tssfllfllm gtisvaflll plqdelgsql pqmfhvslgq klvaayilgl
      241 ltmvflrt
//
LOCUS       XP_061009539             248 aa            linear   MAM 02-DEC-2023
DEFINITION  motile sperm domain-containing protein 3 isoform X2 [Dama dama].
ACCESSION   XP_061009539
VERSION     XP_061009539.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153556.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..248
                     /product="motile sperm domain-containing protein 3 isoform
                     X2"
                     /calculated_mol_wt=26810
     Region          33..133
                     /region_name="Motile_Sperm"
                     /note="MSP (Major sperm protein) domain; pfam00635"
                     /db_xref="CDD:459882"
     CDS             1..248
                     /gene="MOSPD3"
                     /coded_by="XM_061153556.1:201..947"
                     /db_xref="GeneID:133063772"
ORIGIN      
        1 mrrgapqdqe lvgpgapgrg srgapppsgs vvpvlvfppd lvfradqrsg prqlltlynp
       61 tgavlrfrvl ctapakytvf daegyvkpqs cidivirhva pnprhynvqd rfrielseeg
      121 tegrvvgrkd itsvlrapay plelqgqsdp tphpephswt apsaaqpfpe rveagapdgp
      181 cspdphpqla tssfllfllm gtisvaflll plqdelgsql pqmfhvslgq klvaayilgl
      241 ltmvflrt
//
LOCUS       XP_061009540             248 aa            linear   MAM 02-DEC-2023
DEFINITION  motile sperm domain-containing protein 3 isoform X2 [Dama dama].
ACCESSION   XP_061009540
VERSION     XP_061009540.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153557.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..248
                     /product="motile sperm domain-containing protein 3 isoform
                     X2"
                     /calculated_mol_wt=26810
     Region          33..133
                     /region_name="Motile_Sperm"
                     /note="MSP (Major sperm protein) domain; pfam00635"
                     /db_xref="CDD:459882"
     CDS             1..248
                     /gene="MOSPD3"
                     /coded_by="XM_061153557.1:170..916"
                     /db_xref="GeneID:133063772"
ORIGIN      
        1 mrrgapqdqe lvgpgapgrg srgapppsgs vvpvlvfppd lvfradqrsg prqlltlynp
       61 tgavlrfrvl ctapakytvf daegyvkpqs cidivirhva pnprhynvqd rfrielseeg
      121 tegrvvgrkd itsvlrapay plelqgqsdp tphpephswt apsaaqpfpe rveagapdgp
      181 cspdphpqla tssfllfllm gtisvaflll plqdelgsql pqmfhvslgq klvaayilgl
      241 ltmvflrt
//
LOCUS       XP_061009541             248 aa            linear   MAM 02-DEC-2023
DEFINITION  motile sperm domain-containing protein 3 isoform X2 [Dama dama].
ACCESSION   XP_061009541
VERSION     XP_061009541.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153558.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..248
                     /product="motile sperm domain-containing protein 3 isoform
                     X2"
                     /calculated_mol_wt=26810
     Region          33..133
                     /region_name="Motile_Sperm"
                     /note="MSP (Major sperm protein) domain; pfam00635"
                     /db_xref="CDD:459882"
     CDS             1..248
                     /gene="MOSPD3"
                     /coded_by="XM_061153558.1:134..880"
                     /db_xref="GeneID:133063772"
ORIGIN      
        1 mrrgapqdqe lvgpgapgrg srgapppsgs vvpvlvfppd lvfradqrsg prqlltlynp
       61 tgavlrfrvl ctapakytvf daegyvkpqs cidivirhva pnprhynvqd rfrielseeg
      121 tegrvvgrkd itsvlrapay plelqgqsdp tphpephswt apsaaqpfpe rveagapdgp
      181 cspdphpqla tssfllfllm gtisvaflll plqdelgsql pqmfhvslgq klvaayilgl
      241 ltmvflrt
//
LOCUS       XP_061009542             248 aa            linear   MAM 02-DEC-2023
DEFINITION  motile sperm domain-containing protein 3 isoform X2 [Dama dama].
ACCESSION   XP_061009542
VERSION     XP_061009542.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153559.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..248
                     /product="motile sperm domain-containing protein 3 isoform
                     X2"
                     /calculated_mol_wt=26810
     Region          33..133
                     /region_name="Motile_Sperm"
                     /note="MSP (Major sperm protein) domain; pfam00635"
                     /db_xref="CDD:459882"
     CDS             1..248
                     /gene="MOSPD3"
                     /coded_by="XM_061153559.1:172..918"
                     /db_xref="GeneID:133063772"
ORIGIN      
        1 mrrgapqdqe lvgpgapgrg srgapppsgs vvpvlvfppd lvfradqrsg prqlltlynp
       61 tgavlrfrvl ctapakytvf daegyvkpqs cidivirhva pnprhynvqd rfrielseeg
      121 tegrvvgrkd itsvlrapay plelqgqsdp tphpephswt apsaaqpfpe rveagapdgp
      181 cspdphpqla tssfllfllm gtisvaflll plqdelgsql pqmfhvslgq klvaayilgl
      241 ltmvflrt
//
LOCUS       XP_061009543             248 aa            linear   MAM 02-DEC-2023
DEFINITION  motile sperm domain-containing protein 3 isoform X2 [Dama dama].
ACCESSION   XP_061009543
VERSION     XP_061009543.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153560.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..248
                     /product="motile sperm domain-containing protein 3 isoform
                     X2"
                     /calculated_mol_wt=26810
     Region          33..133
                     /region_name="Motile_Sperm"
                     /note="MSP (Major sperm protein) domain; pfam00635"
                     /db_xref="CDD:459882"
     CDS             1..248
                     /gene="MOSPD3"
                     /coded_by="XM_061153560.1:113..859"
                     /db_xref="GeneID:133063772"
ORIGIN      
        1 mrrgapqdqe lvgpgapgrg srgapppsgs vvpvlvfppd lvfradqrsg prqlltlynp
       61 tgavlrfrvl ctapakytvf daegyvkpqs cidivirhva pnprhynvqd rfrielseeg
      121 tegrvvgrkd itsvlrapay plelqgqsdp tphpephswt apsaaqpfpe rveagapdgp
      181 cspdphpqla tssfllfllm gtisvaflll plqdelgsql pqmfhvslgq klvaayilgl
      241 ltmvflrt
//
LOCUS       XP_061009544             248 aa            linear   MAM 02-DEC-2023
DEFINITION  motile sperm domain-containing protein 3 isoform X2 [Dama dama].
ACCESSION   XP_061009544
VERSION     XP_061009544.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153561.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..248
                     /product="motile sperm domain-containing protein 3 isoform
                     X2"
                     /calculated_mol_wt=26810
     Region          33..133
                     /region_name="Motile_Sperm"
                     /note="MSP (Major sperm protein) domain; pfam00635"
                     /db_xref="CDD:459882"
     CDS             1..248
                     /gene="MOSPD3"
                     /coded_by="XM_061153561.1:72..818"
                     /db_xref="GeneID:133063772"
ORIGIN      
        1 mrrgapqdqe lvgpgapgrg srgapppsgs vvpvlvfppd lvfradqrsg prqlltlynp
       61 tgavlrfrvl ctapakytvf daegyvkpqs cidivirhva pnprhynvqd rfrielseeg
      121 tegrvvgrkd itsvlrapay plelqgqsdp tphpephswt apsaaqpfpe rveagapdgp
      181 cspdphpqla tssfllfllm gtisvaflll plqdelgsql pqmfhvslgq klvaayilgl
      241 ltmvflrt
//
LOCUS       XP_061009545             235 aa            linear   MAM 02-DEC-2023
DEFINITION  motile sperm domain-containing protein 3 isoform X3 [Dama dama].
ACCESSION   XP_061009545
VERSION     XP_061009545.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153562.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..235
                     /product="motile sperm domain-containing protein 3 isoform
                     X3"
                     /calculated_mol_wt=25572
     Region          33..133
                     /region_name="Motile_Sperm"
                     /note="MSP (Major sperm protein) domain; pfam00635"
                     /db_xref="CDD:459882"
     CDS             1..235
                     /gene="MOSPD3"
                     /coded_by="XM_061153562.1:137..844"
                     /db_xref="GeneID:133063772"
ORIGIN      
        1 mrrgapqdqe lvgpgapgrg srgapppsgs vvpvlvfppd lvfradqrsg prqlltlynp
       61 tgavlrfrvl ctapakytvf daegyvkpqs cidivirhva pnprhynvqd rfrielseeg
      121 tegrvvgrkd itsvlrapay plelqgqsdp tphpephswt apsaaqpfpe nphpqlatss
      181 fllfllmgti svaflllplq delgsqlpqm fhvslgqklv aayilglltm vflrt
//
LOCUS       XP_061009546             484 aa            linear   MAM 02-DEC-2023
DEFINITION  arf-GAP domain and FG repeat-containing protein 2 isoform X1 [Dama
            dama].
ACCESSION   XP_061009546
VERSION     XP_061009546.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153563.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..484
                     /product="arf-GAP domain and FG repeat-containing protein
                     2 isoform X1"
                     /calculated_mol_wt=49244
     Region          27..143
                     /region_name="ArfGap_AGFG2"
                     /note="ArfGAP domain of AGFG2 (ArfGAP domain and FG
                     repeat-containing protein 2); cd17903"
                     /db_xref="CDD:350090"
     Site            order(44,47,64,67,72)
                     /site_type="other"
                     /note="arginine finger"
                     /db_xref="CDD:350090"
     Site            order(44,47,64,67)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:350090"
     Region          <232..>362
                     /region_name="PRK14959"
                     /note="DNA polymerase III subunits gamma and tau;
                     Provisional"
                     /db_xref="CDD:184923"
     Region          260..>471
                     /region_name="Nucleoporin_FG2"
                     /note="Nucleoporin FG repeated region; pfam15967"
                     /db_xref="CDD:435043"
     CDS             1..484
                     /gene="AGFG2"
                     /coded_by="XM_061153563.1:160..1614"
                     /db_xref="GeneID:133063773"
ORIGIN      
        1 mvmaakkgpg pgggvkaeae aasevwcrrv relggcsqag nrhcfecaqr gvtyvditvg
       61 sfvcttcsgl lrglnpphrv ksismttfte pevlflqsrg nevcrkiwlg lfdartslip
      121 dsrdpqkvke flqekyekkr wyvppdqvkg ptytkgstst pvqgsipegk pprtllgdpv
      181 pslsaaasss sqpvsqprts qprssqpppp ssvkkastdl ladiggdpfa apqlapafaa
      241 fpafggqtps hgsfanfdaf ssgpgssafg sippagqapf qaqpappasr mltgshsfgs
      301 sqgtpfgasp lapasqpnsl advgsllgpg asaggipssi fgmagqvptl qsattgggss
      361 pglafgafnp fttpaahaql pstnpfqpng latgpgfgms gagpgfpqtv pptgafaspf
      421 ppplfpaqts mtqqqngysf gdlgstklgq gplsqpagis tnpfvtgsss spfaakpptt
      481 npfl
//
LOCUS       XP_061009547             473 aa            linear   MAM 02-DEC-2023
DEFINITION  arf-GAP domain and FG repeat-containing protein 2 isoform X2 [Dama
            dama].
ACCESSION   XP_061009547
VERSION     XP_061009547.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153564.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..473
                     /product="arf-GAP domain and FG repeat-containing protein
                     2 isoform X2"
                     /calculated_mol_wt=48069
     Region          27..143
                     /region_name="ArfGap_AGFG2"
                     /note="ArfGAP domain of AGFG2 (ArfGAP domain and FG
                     repeat-containing protein 2); cd17903"
                     /db_xref="CDD:350090"
     Site            order(44,47,64,67,72)
                     /site_type="other"
                     /note="arginine finger"
                     /db_xref="CDD:350090"
     Site            order(44,47,64,67)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:350090"
     Region          <261..417
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     CDS             1..473
                     /gene="AGFG2"
                     /coded_by="XM_061153564.1:160..1581"
                     /db_xref="GeneID:133063773"
ORIGIN      
        1 mvmaakkgpg pgggvkaeae aasevwcrrv relggcsqag nrhcfecaqr gvtyvditvg
       61 sfvcttcsgl lrglnpphrv ksismttfte pevlflqsrg nevcrkiwlg lfdartslip
      121 dsrdpqkvke flqekyekkr wyvppdqvkg ptytkgstst pvqgsipegk pprtllgdpv
      181 pslsaaasss sqpvsqprts qprssqpppp ssvkkastdl ladiggdpfa apqlapafaa
      241 fpafggqtps hgsfanfdaf ssgpgssafg sippagqapf qaqpappgss qgtpfgaspl
      301 apasqpnsla dvgsllgpga saggipssif gmagqvptlq sattgggssp glafgafnpf
      361 ttpaahaqlp stnpfqpngl atgpgfgmsg agpgfpqtvp ptgafaspfp pplfpaqtsm
      421 tqqqngysfg dlgstklgqg plsqpagist npfvtgssss pfaakppttn pfl
//
LOCUS       XP_061009548             421 aa            linear   MAM 02-DEC-2023
DEFINITION  TSC22 domain family protein 4 [Dama dama].
ACCESSION   XP_061009548
VERSION     XP_061009548.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153565.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..421
                     /product="TSC22 domain family protein 4"
                     /calculated_mol_wt=42793
     Region          342..416
                     /region_name="ZIP_TSC22D4"
                     /note="leucine zipper domain found in TSC22 domain family
                     protein 4; cd21941"
                     /db_xref="CDD:409281"
     Site            order(365..367,370,373..374,377..378,380..381,384..385,
                     387..388,391..392,395,399)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:409281"
     CDS             1..421
                     /gene="TSC22D4"
                     /coded_by="XM_061153565.1:953..2218"
                     /db_xref="GeneID:133063775"
ORIGIN      
        1 msggkkkssf qitsvtldye gpgspggsda palpapagpl aptgpsapap aglpapaptg
       61 ppprlpngep npepggkstp rngspppgap asrfrvvklp qglgepyrrg rwtcvdvyer
      121 dleppsfgrl legirgasgg nggrsldsrl elaslglgtp tpqpglsqvp tswlrpppts
      181 pgpqarsftg glgqlavpgk akvetpplsa sppqqrppep gtgdsagpsg aatplptlrv
      241 eaeaggstaa agagtpplsr vkdgalrlrm elvapeemgq vppvdsrpss palyffpdas
      301 lvhkspdpfg taaaqslsfa rsmlaisghl dsdddsgsgs lvgidnkieq amdlvkshlm
      361 favreevevl keqirdlaer naaleqengl lralaspeql aqlpssgvpr lgppapngps
      421 v
//
LOCUS       XP_061009549             201 aa            linear   MAM 02-DEC-2023
DEFINITION  sperm acrosome developmental regulator isoform X1 [Dama dama].
ACCESSION   XP_061009549
VERSION     XP_061009549.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153566.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..201
                     /product="sperm acrosome developmental regulator isoform
                     X1"
                     /calculated_mol_wt=22412
     Region          16..201
                     /region_name="DUF4703"
                     /note="Domain of unknown function (DUF4703); pfam15775"
                     /db_xref="CDD:406259"
     CDS             1..201
                     /gene="SPACDR"
                     /coded_by="XM_061153566.1:670..1275"
                     /db_xref="GeneID:133063776"
ORIGIN      
        1 mtsymgnaqg apgvhvffwk hksksvimdh tdskknelka ekafkvsetf klveppkeak
       61 iskmdvshkv adpcllaktt mdgaaveagr hrrsllqlpq aaiksvsmlm asalqsgwhm
      121 cswkssvsst svasqmktgs plesreaaml revylvlwai rkqlrqlarr qerrrrrhlr
      181 ahmgpqpdpa qglkqdarsp l
//
LOCUS       XP_061009550             204 aa            linear   MAM 02-DEC-2023
DEFINITION  sperm acrosome developmental regulator isoform X2 [Dama dama].
ACCESSION   XP_061009550
VERSION     XP_061009550.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153567.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..204
                     /product="sperm acrosome developmental regulator isoform
                     X2"
                     /calculated_mol_wt=23314
     Region          19..204
                     /region_name="DUF4703"
                     /note="Domain of unknown function (DUF4703); pfam15775"
                     /db_xref="CDD:406259"
     CDS             1..204
                     /gene="SPACDR"
                     /coded_by="XM_061153567.1:341..955"
                     /db_xref="GeneID:133063776"
ORIGIN      
        1 mavvirffrw iwqkisrwvf fwkhksksvi mdhtdskkne lkaekafkvs etfklveppk
       61 eakiskmdvs hkvadpclla kttmdgaave agrhrrsllq lpqaaiksvs mlmasalqsg
      121 whmcswkssv sstsvasqmk tgsplesrea amlrevylvl wairkqlrql arrqerrrrr
      181 hlrahmgpqp dpaqglkqda rspl
//
LOCUS       XP_061009551             687 aa            linear   MAM 02-DEC-2023
DEFINITION  7SK snRNA methylphosphate capping enzyme [Dama dama].
ACCESSION   XP_061009551
VERSION     XP_061009551.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153568.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..687
                     /product="7SK snRNA methylphosphate capping enzyme"
                     /calculated_mol_wt=73768
     Region          444..614
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cd02440"
                     /db_xref="CDD:100107"
     Site            order(448..454,472..473,556..558,579)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
     Region          573..681
                     /region_name="Bin3"
                     /note="Bicoid-interacting protein 3 (Bin3); pfam06859"
                     /db_xref="CDD:462022"
     CDS             1..687
                     /gene="MEPCE"
                     /coded_by="XM_061153568.1:517..2580"
                     /db_xref="GeneID:133063777"
ORIGIN      
        1 miemaaekep flvpappppl kdesgggggp tvqshreaas gelrggtqra pgprahsags
       61 pasgagkesp gaastprggq sqqqqrgggp paqshgeacl sdphgraapp dvgeerrggg
      121 gtelgppapp rprngyqphr ppgggggkrr nschvggggg gfkhpafkrr rrvnsdcdsv
      181 lpsnfllggn ifdplnlnsl ldeevsraln aetpkssplp akgrdpveil ipkditdpls
      241 lntctdeaqv vlasplktgr krhrhrgqhh hqqqqaaggn dshsalptap ptsslhgegt
      301 tqqhggqnrd apqpyelnta incrdevvsp lpsalqgpsg slsappaasv tsappssssr
      361 hrkrrrtssk seagargggq gskekgrgsg ggrhhpqplp aatfkrqqck fqygnyckyy
      421 gyrnpscedg rlrvlkpewf rgrdvldlgc nvghltlsia ckwgpsrmvg ldidaqlihs
      481 arqnirhyls eelrlppqts eggpgaesee gtaavrkrsy fpasltasrg piaapqvpld
      541 gadtavfpnn vvfvtgnyvl drdelveaqk peydvvlcls ltkwvhlnwg deglkrmfrr
      601 iyrhlrpggi lvlepqpwss ygrrktlter iyknyfriql kpeqfssylt spevgfssye
      661 lvatpnntsr gfqrpvylfh kaqspsh
//
LOCUS       XP_061009553             268 aa            linear   MAM 02-DEC-2023
DEFINITION  protein phosphatase 1 regulatory subunit 35 [Dama dama].
ACCESSION   XP_061009553
VERSION     XP_061009553.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153570.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..268
                     /product="protein phosphatase 1 regulatory subunit 35"
                     /calculated_mol_wt=28982
     Region          116..263
                     /region_name="PPP1R35_C"
                     /note="Protein phosphatase 1 regulatory subunit 35
                     C-terminus; pfam15503"
                     /db_xref="CDD:434762"
     CDS             1..268
                     /gene="PPP1R35"
                     /coded_by="XM_061153570.1:1021..1827"
                     /db_xref="GeneID:133063778"
ORIGIN      
        1 mmvcdesqle sveggeavav pgpppeprap epgapvpepg ldlslslspr sespgrgrtn
       61 cspgrrkgra drrggarkgr qvrfrlapps pvrserppaa asssekpeap qdlgapvqqs
      121 slalslelqa araaaggqfn aakaveeqlr ksfqtrcgle esvteglnvp rskrlfrdlv
      181 slqvpeeqvl naalreklal lppqarappp keppgprpdm tilcdpetlf yesphltleg
      241 lpplrlqlrp rpsedtflmh rtlrrwea
//
LOCUS       XP_061009554             299 aa            linear   MAM 02-DEC-2023
DEFINITION  paired immunoglobulin-like type 2 receptor alpha isoform X1 [Dama
            dama].
ACCESSION   XP_061009554
VERSION     XP_061009554.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153571.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..299
                     /product="paired immunoglobulin-like type 2 receptor alpha
                     isoform X1"
                     /calculated_mol_wt=32763
     Region          29..146
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          45..49
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          64..71
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          104..108
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          118..123
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..299
                     /gene="PILRA"
                     /coded_by="XM_061153571.1:153..1052"
                     /db_xref="GeneID:133063779"
ORIGIN      
        1 mglalllpll llaslqaghw aqrnpqavfg mkqrrhlsap eggsihipfs fsypgklakd
       61 pnvriswrwk hfhgefiynm tppfihenfk nrlflnwtep ektgslqisd lrredqsvyf
      121 crvelvtlty gkqqwqsieg tnltvtpgrk tttqnpttta aatattslrn sesgkspqsw
      181 lqsteaivgl alasaalvtt ivglivyfrc krsksaqtea rtparessqn seenyentgn
      241 kgqhvdpkpd akddgggsgg vlyasltlst lnspataapp lprpqegpqe etlysilka
//
LOCUS       XP_061009555             259 aa            linear   MAM 02-DEC-2023
DEFINITION  paired immunoglobulin-like type 2 receptor alpha isoform X2 [Dama
            dama].
ACCESSION   XP_061009555
VERSION     XP_061009555.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153572.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..259
                     /product="paired immunoglobulin-like type 2 receptor alpha
                     isoform X2"
                     /calculated_mol_wt=28290
     Region          <20..105
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          24..27
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          64..68
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          78..86
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          98..101
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..259
                     /gene="PILRA"
                     /coded_by="XM_061153572.1:151..930"
                     /db_xref="GeneID:133063779"
ORIGIN      
        1 mglalllpll llaslqaakd pnvriswrwk hfhgefiynm tppfihenfk nrlflnwtep
       61 ektgslqisd lrredqsvyf crvelvtlty gkqqwqsieg tnltvtpgrk tttqnpttta
      121 aatattslrn sesgkspqsw lqsteaivgl alasaalvtt ivglivyfrc krsksaqtea
      181 rtparessqn seenyentgn kgqhvdpkpd akddgggsgg vlyasltlst lnspataapp
      241 lprpqegpqe etlysilka
//
LOCUS       XP_061009556             248 aa            linear   MAM 02-DEC-2023
DEFINITION  paired immunoglobulin-like type 2 receptor alpha isoform X3 [Dama
            dama].
ACCESSION   XP_061009556
VERSION     XP_061009556.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153573.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..248
                     /product="paired immunoglobulin-like type 2 receptor alpha
                     isoform X3"
                     /calculated_mol_wt=27430
     Region          29..146
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          45..49
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          64..71
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          104..108
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          118..123
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..248
                     /gene="PILRA"
                     /coded_by="XM_061153573.1:156..902"
                     /db_xref="GeneID:133063779"
ORIGIN      
        1 mglalllpll llaslqaghw aqrnpqavfg mkqrrhlsap eggsihipfs fsypgklakd
       61 pnvriswrwk hfhgefiynm tppfihenfk nrlflnwtep ektgslqisd lrredqsvyf
      121 crvelvtlty gkqqwqsieg tnltvtpgrk tttqnpttta aatattslrn sesgkspqsw
      181 lqsteaivgl alasaalvtt ivglivyfrc krsksaqtea rtpasvlpgp lprwrllgdq
      241 glsttqgt
//
LOCUS       XP_061009557             657 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger CW-type PWWP domain protein 1 [Dama dama].
ACCESSION   XP_061009557
VERSION     XP_061009557.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153574.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..657
                     /product="zinc finger CW-type PWWP domain protein 1"
                     /calculated_mol_wt=72645
     Region          265..311
                     /region_name="zf-CW"
                     /note="CW-type Zinc Finger; pfam07496"
                     /db_xref="CDD:462181"
     Region          320..436
                     /region_name="PWWP_ZCWPW1"
                     /note="PWWP domain found in zinc finger CW-type PWWP
                     domain protein 1 (ZCWPW1) and similar proteins; cd20145"
                     /db_xref="CDD:438973"
     Site            order(338,341,372)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438973"
     Site            339..342
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438973"
     CDS             1..657
                     /gene="ZCWPW1"
                     /coded_by="XM_061153574.1:161..2134"
                     /db_xref="GeneID:133063780"
ORIGIN      
        1 mmptleskek cgkgqkntfa ppaqklhslm pynlnsskee ileisspqae vrpsllkagl
       61 ekkkekttte ngpvsgqeik gkaqdskkak kekekstlts aefeeivqiv lrksfqeclg
      121 mafifcfgrt essldfsets ctqptrctql dkepriassn tsdnnnpdgv vvppileisa
      181 sqedgiipei kiskpgqpds assekkfnkf slskrkkeaq dekmetdqsg hehrqndqqk
      241 etiqdhsqnr dqqkgegsgf gqclvwvqcs spncekwrrl hgnidpsilp dnwscdqntd
      301 lqynrcdipe etwtghesdv ayasyipgsi iwakqygypw wpgmvepdpd lgeyflfash
      361 ldslpskyhv tffgetvsra wipvnmlknf qelslelsgl rkcknkdciq klglavmmaq
      421 kaeqisiqer vnlfgfwsry sgpddsgeek dlllsgassl dsclekekke peleededee
      481 qdktdptlpn pksakiqtkk pkarglgvgs daggadgqdg tlkrrttkrp llnepapppv
      541 piigrkkghg nsgpeqpdpk kkfkapqska svsslseere arlvpevptp paargarlgg
      601 eegpepqdag svpcddgass dldldqlmgd vgeelepree pqhrvdtgel avafcee
//
LOCUS       XP_061009558             311 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein PVRIG [Dama dama].
ACCESSION   XP_061009558
VERSION     XP_061009558.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153575.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..311
                     /product="transmembrane protein PVRIG"
                     /calculated_mol_wt=32521
     Region          37..133
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          38..42
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          54..58
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          94..98
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          108..118
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          127..130
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..311
                     /gene="PVRIG"
                     /coded_by="XM_061153575.1:151..1086"
                     /db_xref="GeneID:133063781"
ORIGIN      
        1 mdrpralgll wvlltlclta gtpevwlqvq reateasfti rcgflgsgsi slvtvsyggp
       61 dgaggttlav lhptlgtknw taacrarwet stsvsltveg aptagrgsgp nttfcckfts
      121 fpegsqeacg nlslsadpgl paaspapvlr adlagilgvs gvllsgciyl lyllrrqrhw
      181 aimklqpprh sspqtdggas aagqasltsf hapyatatat ttnyfspatl hrvpppqplp
      241 gwvplpthaa rrpqspgpwa pppastrssf vsvenrlyaq aekwplhara dcillsdplg
      301 rraalgpsgv r
//
LOCUS       XP_061009559            1248 aa            linear   MAM 02-DEC-2023
DEFINITION  cohesin subunit SA-3 [Dama dama].
ACCESSION   XP_061009559
VERSION     XP_061009559.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153576.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1248
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1248
                     /product="cohesin subunit SA-3"
                     /calculated_mol_wt=140818
     Region          56..>414
                     /region_name="IRR1"
                     /note="Cohesin [Cell division and chromosome
                     partitioning]; COG5537"
                     /db_xref="CDD:227824"
     Region          193..306
                     /region_name="STAG"
                     /note="STAG domain; pfam08514"
                     /db_xref="CDD:462502"
     CDS             1..1248
                     /gene="STAG3"
                     /coded_by="XM_061153576.1:1..3747"
                     /db_xref="GeneID:133063782"
ORIGIN      
        1 mpthrssssr yqsssspnna ssplrravaa grrsvsasss ssvsvampcd drdseqnseg
       61 dseslsageg sdfedslrrn gkkraakrpl kptpaklpkk rsrtvhahgq keseppasdl
      121 fdavkgaksd mqslvdewld sykqdqdaaf lelvnffirs cgckgtvtpe mfkkmsnsei
      181 irhlteqfne dsgdypltas gpswkkfqgs fcefvrtlvy qcqysllydg fpmdnlisll
      241 tglsdsqvra frhtstlaam klmtslvrva lqlslhkdnn qrqyeaernk gpgqraperl
      301 esllekrrel qehqeeiegm mnalfrgvfv hryrdvlpei raicieeigs wmqsystsfl
      361 tdsylkyigw tlhdkhrdvr lkclkalqgl ygnqdltarl elftsrfkdr mvsmvmdrey
      421 dvaveavrll ililksmdgv ltdadcesiy pvvyasnral asaageflyw klfypecetr
      481 avggrerrrs praqrtffyl llsffvesel hdhaaylvds lwdcagpllk dwesltslll
      541 ekdqnlgdaq estlveilvs svrqaseghp pvgratgrkg ltpkerkiqa ddkvkltehl
      601 ipllpqllak fsadaekvap llqllnyfdl niyctrrlek hlelllqqlq evvvkhaepa
      661 vleagahaly llcnpeftff srvdfarsql vdlltdrfqq eleellqssf ldedevysla
      721 atlkrlsafy nahdltrwel yepcyqllrk avdtgevphq vtlpaltlvy fsilwtlthi
      781 sgsdasqkql lglkgrmvaf celcqsclsd vdseiqeqaf vllsdlllif spqmivggre
      841 flrplvfipe atlqselasf lmdhvfiqpg elssghsqed hlqieqlhqr rrllagfckl
      901 llygvlemda asdvfkhynk fyndygdiik etltrarqmd rshcsrilll slkqlytell
      961 qeqgpqglne lpafiemrdl arrfalsfgp qqlqnrdlvv mlhkegikfs lselppagss
     1021 sqppnlafle llsefsprlf hqdkqlllsy lekclqrvsq apgrpwgpvt tychslspge
     1081 ntaevspqgy prskkrrveg psrrhredvs asqeeslqpn sipatptlts tavksgqplg
     1141 aseemkeggs selafppgly llgnprsrsl spqhfqtpln psgsglgkql trlslmeede
     1201 eefeiqndss eewqgsgkss sssehrldll dstelnieal phlhdmtt
//
LOCUS       XP_061009561             580 aa            linear   MAM 02-DEC-2023
DEFINITION  trafficking protein particle complex subunit 14 [Dama dama].
ACCESSION   XP_061009561
VERSION     XP_061009561.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153578.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..580
                     /product="trafficking protein particle complex subunit 14"
                     /calculated_mol_wt=62348
     Region          139..579
                     /region_name="DUF4707"
                     /note="Domain of unknown function (DUF4707); pfam15806"
                     /db_xref="CDD:464885"
     CDS             1..580
                     /gene="TRAPPC14"
                     /coded_by="XM_061153578.1:167..1909"
                     /db_xref="GeneID:133063784"
ORIGIN      
        1 mesqcdysmy fpavplppra elagdpgryr alprrnhlyl getvrfllvl rcrggagsga
       61 gggpglgsrg awaelatala alasvsaggg apggggsgdq dpeppgggdp gggglfrgcs
      121 pllthgpgpa tsggattlpv eepivstdev ifpltvsldr lppgtpkaki vvtvwkreve
      181 apevrdqgyl rllqtrspge tfrgeqsafk aqvstlltll pppvlkcrqf tvagkhltvl
      241 kvlnsssqee isvwdirilp nfnasylpvm pdgsvllvdn vchqsgevsm gsfcrlpgts
      301 gcfpcplsal eehnflfqlr ggeqpppgak eglevpliav vqwstpklpf tqsiythyrl
      361 psirldrpcf vmtascespv rtyerftvty tllnnlqdfl avrlvwtpeh aqagkqlcee
      421 erramqaald sivchtplnn lgfsrkgsal tfsvafqalr tglfelsqhm klklqftasv
      481 shpppearpl srksspsspa vrdlverhqa slgrsqsfsh qqpsrshlmr sgsvmerrai
      541 tppvaspvgr plylppdkav lsldkiakre ckvlvvepvk
//
LOCUS       XP_061009562             546 aa            linear   MAM 02-DEC-2023
DEFINITION  NXPE family member 3-like isoform X1 [Dama dama].
ACCESSION   XP_061009562
VERSION     XP_061009562.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153579.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..546
                     /product="NXPE family member 3-like isoform X1"
                     /calculated_mol_wt=59573
     Region          <120..260
                     /region_name="Neurexophilin"
                     /note="pfam06312"
                     /db_xref="CDD:428882"
     CDS             1..546
                     /gene="LOC133063785"
                     /coded_by="XM_061153579.1:249..1889"
                     /db_xref="GeneID:133063785"
ORIGIN      
        1 msnkqlqast dlfirqfkwp rtvavasvia mcifcigvsw pdrtvplppg prpahkssgs
       61 lpqgfsglth llhwpltpgd ggdllastsp qtstyhlrsp aqtsyalggy leailiardh
      121 qgrpkahggd lfraqllgpd lkagvpgdvt dlengtyllt lpllwagqaq vqvrlihsse
      181 avrvlrgiwr dqwatvdftg yfrgptgyee tvtcnvnpll igeeegtchy rdedsgelwf
      241 carpptlpcd slvghssgry wnvttpheea llarnvtnkt lpqgippiwv aqennrslvl
      301 sppqpchpgi paprpsgfyh qnvwhslscs grsfstadsi lgclagrvvh mmgdstlrqw
      361 weylrdaapa lkpvdlhaty hagplmavdt araivlhwra hgwplrslrt pvaalhsvvr
      421 elgglaggph tvvvlslgah fttfppsifv qrlagvraav aallareprt lvviklantg
      481 yksvygsdwf tlqvnrllra afadlrvafv dawemtssla lpdsihpgrc vvrnevdfll
      541 shvcpt
//
LOCUS       XP_061009563             475 aa            linear   MAM 02-DEC-2023
DEFINITION  NXPE family member 3-like isoform X2 [Dama dama].
ACCESSION   XP_061009563
VERSION     XP_061009563.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153580.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..475
                     /product="NXPE family member 3-like isoform X2"
                     /calculated_mol_wt=51758
     Region          <120..260
                     /region_name="Neurexophilin"
                     /note="pfam06312"
                     /db_xref="CDD:428882"
     CDS             1..475
                     /gene="LOC133063785"
                     /coded_by="XM_061153580.1:249..1676"
                     /db_xref="GeneID:133063785"
ORIGIN      
        1 msnkqlqast dlfirqfkwp rtvavasvia mcifcigvsw pdrtvplppg prpahkssgs
       61 lpqgfsglth llhwpltpgd ggdllastsp qtstyhlrsp aqtsyalggy leailiardh
      121 qgrpkahggd lfraqllgpd lkagvpgdvt dlengtyllt lpllwagqaq vqvrlihsse
      181 avrvlrgiwr dqwatvdftg yfrgptgyee tvtcnvnpll igeeegtchy rdedsgelwf
      241 carpptlpcd slvghssgry wnvttpheea llarnvtnkt lpqgippiwv aqennrslal
      301 kpvdlhatyh agplmavdta raivlhwrah gwplrslrtp vaalhsvvre lgglaggpht
      361 vvvlslgahf ttfppsifvq rlagvraava allareprtl vviklantgy ksvygsdwft
      421 lqvnrllraa fadlrvafvd awemtsslal pdsihpgrcv vrnevdflls hvcpt
//
LOCUS       XP_061009564             483 aa            linear   MAM 02-DEC-2023
DEFINITION  galactose-3-O-sulfotransferase 4 [Dama dama].
ACCESSION   XP_061009564
VERSION     XP_061009564.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153581.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..483
                     /product="galactose-3-O-sulfotransferase 4"
                     /calculated_mol_wt=53781
     Region          18..466
                     /region_name="Sulfotransfer_2"
                     /note="Sulfotransferase family; cl22970"
                     /db_xref="CDD:451469"
     CDS             1..483
                     /gene="GAL3ST4"
                     /coded_by="XM_061153581.1:291..1742"
                     /db_xref="GeneID:133063786"
ORIGIN      
        1 mgllsptrtm rlwgprglgv algvfmtigf alqlwggpfq rrlpglqlrh fwasspgpaa
       61 pscpprqrlv flkthksgss svlsllhryg drhglrfalp aryqfgyprl fqasrvkgyr
      121 pqsgdtqppf hilchhmrfn lkevlqvmps dsfffsivrd paalarsafs yyksassafr
      181 kapslaafla nprafyrpga rgdhyarnll wfdfglpfpp dmrtkrgnph vsrdpnppql
      241 psgagppaht ldpnalfhpv ptvadghsqr sspasldlgs ssfiqwnlaw ldsvfdlvlv
      301 aeyfdeslvl ladalcwgld dvvgfmhnaq agggqdgsti ddgglttedr qltararawn
      361 nldwalyvhf nrslwarikq ygqsrlesav aelrarreal akhclvggea ldpkyitdrr
      421 frpfqfgsgk vlgyvlrsgl slqdqeecer latpelqykd kldakqfppt vslllktsrr
      481 psp
//
LOCUS       XP_061009565              99 aa            linear   MAM 02-DEC-2023
DEFINITION  ragulator complex protein LAMTOR4 [Dama dama].
ACCESSION   XP_061009565
VERSION     XP_061009565.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153582.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..99
                     /product="ragulator complex protein LAMTOR4"
                     /calculated_mol_wt=10585
     CDS             1..99
                     /gene="LAMTOR4"
                     /coded_by="XM_061153582.1:119..418"
                     /db_xref="GeneID:133063787"
ORIGIN      
        1 mtsaltqgle ripdqlgylv lsegavlass gdlendeqaa stiselvsta cgfrlhqgms
       61 vpfkrlsvvf gehtllvtvs gqrvfvvkrq nrgrepidv
//
LOCUS       XP_061009566             450 aa            linear   MAM 02-DEC-2023
DEFINITION  calcium-binding and coiled-coil domain-containing protein 2-like
            [Dama dama].
ACCESSION   XP_061009566
VERSION     XP_061009566.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153583.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..450
                     /product="calcium-binding and coiled-coil
                     domain-containing protein 2-like"
                     /calculated_mol_wt=52346
     Region          23..125
                     /region_name="SKICH"
                     /note="SKICH domain; pfam17751"
                     /db_xref="CDD:465482"
     Region          139..>346
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     Region          424..450
                     /region_name="Zn-C2H2_CALCOCO2"
                     /note="C2H2-type zinc binding domain found in
                     calcium-binding and coiled-coil domain-containing protein
                     2 (CALCOCO2) and similar proteins; cd21968"
                     /db_xref="CDD:412014"
     CDS             1..450
                     /gene="LOC133063788"
                     /coded_by="XM_061153583.1:73..1425"
                     /db_xref="GeneID:133063788"
ORIGIN      
        1 meetvedppt savlldhchf sqvifnsvek fyipggditc yytltqhfip rrkdwigifr
       61 vgwkttreyy tftwvtlpvd lnsesaklqe vqfkayylpk ddeyyqfccv dqdgvvrgas
      121 ipfqfrpene edilvvttqg eveeieqhnk elckenrelk dscislqkqn sdmqatlqkk
      181 qeeletlksi nkkleqtmke qkdcweiell qlkeqnqkms senekmgvrv dqlqaqlsnq
      241 gkemeklvqg vqdkteqleh lkeengqlfl slteqrehqk kleqtveemk qrettaakkq
      301 qelmdqnmdl skrlsenktm ynvlqrekek meeendflkr ensrllsymg ldcdslsyqv
      361 ptsnqggtrq dpglvfgnpy sgiqessaps llsikkcptc ksdfpddvfd hnlaleqhlq
      421 tpslscpicd ktfsakekqi fedhvfchtl
//
LOCUS       XP_061009567             263 aa            linear   MAM 02-DEC-2023
DEFINITION  metallo-beta-lactamase domain-containing protein 1 [Dama dama].
ACCESSION   XP_061009567
VERSION     XP_061009567.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153584.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..263
                     /product="metallo-beta-lactamase domain-containing protein
                     1"
                     /calculated_mol_wt=27224
     Region          24..238
                     /region_name="MBLAC1-like_MBL-fold"
                     /note="uncharacterized human metallo-beta-lactamase
                     domain-containing protein 1 and related proteins; MBL-fold
                     metallo hydrolase domain; cd07711"
                     /db_xref="CDD:293797"
     Site            order(116,118,120..121,171..172,194,233)
                     /site_type="active"
                     /db_xref="CDD:293797"
     CDS             1..263
                     /gene="MBLAC1"
                     /coded_by="XM_061153584.1:408..1199"
                     /db_xref="GeneID:133063790"
ORIGIN      
        1 msglvrtepl pgetpllvpg dpysvvvllq gyaepegvgd avradgsvtl vlpqawapps
       61 threplryea kaaleeaarg pilvdtagpw areallgala gqgvapgdvt lvvgthghsd
      121 hignlglfpg aallvshdfc lpggrylphg lgeerplrlg pglevwatpg hggqrdvsvl
      181 vagtalgtim vvgdvferdg degswqalse dpvaqkhsrk rvlgtadvvv pghgapfrvi
      241 reasapetep arsrdgeept vhg
//
LOCUS       XP_061009568             242 aa            linear   MAM 02-DEC-2023
DEFINITION  protein canopy homolog 4 [Dama dama].
ACCESSION   XP_061009568
VERSION     XP_061009568.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153585.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..242
                     /product="protein canopy homolog 4"
                     /calculated_mol_wt=27624
     Region          36..186
                     /region_name="DUF3456"
                     /note="TLR4 regulator and MIR-interacting MSAP; pfam11938"
                     /db_xref="CDD:463404"
     CDS             1..242
                     /gene="CNPY4"
                     /coded_by="XM_061153585.1:115..843"
                     /db_xref="GeneID:133063791"
ORIGIN      
        1 mgpvrlgtll filivygawa gtpkeedddt erlpskcevc kllslelqee lsrtgrsrev
       61 lelgqvldtg krkrhipysv setrleeale nlcerildys vhaerkgslr yakgqsqtma
      121 tlkglvqkgv kvdlgiplel wdepsvevtf lkkqcetmle efedvvgdwy fhhqeqplqh
      181 flceghvlpa setaclqetw tgkekitdgq ekteeeeqdq eeeeeeemtn tpvhsqhdpe
      241 dl
//
LOCUS       XP_061009569             749 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription initiation factor TFIID subunit 6 isoform X1 [Dama
            dama].
ACCESSION   XP_061009569
VERSION     XP_061009569.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153586.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..749
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..749
                     /product="transcription initiation factor TFIID subunit 6
                     isoform X1"
                     /calculated_mol_wt=80367
     Region          80..479
                     /region_name="TAF6"
                     /note="Transcription initiation factor TFIID, subunit TAF6
                     (also component of histone acetyltransferase SAGA)
                     [Transcription]; COG5095"
                     /db_xref="CDD:227426"
     Region          285..501
                     /region_name="TAF6C"
                     /note="C-terminal domain of TATA Binding Protein (TBP)
                     Associated Factor 6 (TAF6); cd08050"
                     /db_xref="CDD:381749"
     Site            order(289..291,293..294,297,308..309,312,316,319..320,326)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:381749"
     Region          289..320
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:381749"
     Region          327..362
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:381749"
     Region          372..415
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:381749"
     Region          422..454
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:381749"
     Region          456..500
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:381749"
     Region          684..>745
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..749
                     /gene="TAF6"
                     /coded_by="XM_061153586.1:494..2743"
                     /db_xref="GeneID:133063792"
ORIGIN      
        1 mgigslgtsr eehsrqrdra kttkqehawh lgtarrtvgl dhsgrrkerv sispspprgh
       61 hpsgegrrgs rmaeekklkl sntvlpsesm kvvaesmgia qiqeetcqll tdevsyrike
      121 iaqdalkfmh mgkrqkltts didyalklkn veplygfhaq efipfrfasg ggrelyfyee
      181 kevdlsdiin tplprvpldv clkahwlsie gcqpaipenp ppapkeqqka eateplksak
      241 pgqeedgplk gkgqgaapad gkgkekkapp llegaplrlk prsihelsve qqlyykeite
      301 acvgsceakr aealqsiatd pglyqmlprf stfisegvrv nvvqnnlall iylmrmvkal
      361 mdnptlylek yvhelipavm tcivsrqlcl rpdvdnhwal rdfaarlvaq ickhfstttn
      421 niqsritktf tkswvdektp wttrygsiag laelghdvik tlilprlqqe gerirgvldg
      481 pvlsnidrig adhvqslllk hcapvlaklr pppdnqdayr aefgslgpll cshvvkaraq
      541 aalqaqqvnr ttltitqprp tltlsqapqp gprtpgllkv pgsialpvqt lvsaraaapp
      601 qpsppptkfi vmsssstass tqqvlslsts apgsgsttts pvtttvpsvq pivklvstat
      661 ttppstapsg pgsvqkyivv slpptgegkg gptshpspap tpssapsplg gsalcggkpe
      721 agespppapg tpkangsqpp gagsplpap
//
LOCUS       XP_061009571             706 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription initiation factor TFIID subunit 6 isoform X2 [Dama
            dama].
ACCESSION   XP_061009571
VERSION     XP_061009571.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153588.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..706
                     /product="transcription initiation factor TFIID subunit 6
                     isoform X2"
                     /calculated_mol_wt=75262
     Region          37..436
                     /region_name="TAF6"
                     /note="Transcription initiation factor TFIID, subunit TAF6
                     (also component of histone acetyltransferase SAGA)
                     [Transcription]; COG5095"
                     /db_xref="CDD:227426"
     Region          242..458
                     /region_name="TAF6C"
                     /note="C-terminal domain of TATA Binding Protein (TBP)
                     Associated Factor 6 (TAF6); cd08050"
                     /db_xref="CDD:381749"
     Site            order(246..248,250..251,254,265..266,269,273,276..277,283)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:381749"
     Region          246..277
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:381749"
     Region          284..319
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:381749"
     Region          329..372
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:381749"
     Region          379..411
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:381749"
     Region          413..457
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:381749"
     Region          641..>702
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..706
                     /gene="TAF6"
                     /coded_by="XM_061153588.1:7..2127"
                     /db_xref="GeneID:133063792"
ORIGIN      
        1 mapsagvsis pspprghhps gegrrgsrma eekklklsnt vlpsesmkvv aesmgiaqiq
       61 eetcqlltde vsyrikeiaq dalkfmhmgk rqklttsdid yalklknvep lygfhaqefi
      121 pfrfasgggr elyfyeekev dlsdiintpl prvpldvclk ahwlsiegcq paipenpppa
      181 pkeqqkaeat eplksakpgq eedgplkgkg qgaapadgkg kekkapplle gaplrlkprs
      241 ihelsveqql yykeiteacv gsceakraea lqsiatdpgl yqmlprfstf isegvrvnvv
      301 qnnlalliyl mrmvkalmdn ptlylekyvh elipavmtci vsrqlclrpd vdnhwalrdf
      361 aarlvaqick hfstttnniq sritktftks wvdektpwtt rygsiaglae lghdviktli
      421 lprlqqeger irgvldgpvl snidrigadh vqslllkhca pvlaklrppp dnqdayraef
      481 gslgpllcsh vvkaraqaal qaqqvnrttl titqprptlt lsqapqpgpr tpgllkvpgs
      541 ialpvqtlvs araaappqps ppptkfivms ssstasstqq vlslstsapg sgstttspvt
      601 ttvpsvqpiv klvstatttp pstapsgpgs vqkyivvslp ptgegkggpt shpspaptps
      661 sapsplggsa lcggkpeage spppapgtpk angsqppgag splpap
//
LOCUS       XP_061009572             678 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription initiation factor TFIID subunit 6 isoform X3 [Dama
            dama].
ACCESSION   XP_061009572
VERSION     XP_061009572.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153589.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..678
                     /product="transcription initiation factor TFIID subunit 6
                     isoform X3"
                     /calculated_mol_wt=72455
     Region          9..408
                     /region_name="TAF6"
                     /note="Transcription initiation factor TFIID, subunit TAF6
                     (also component of histone acetyltransferase SAGA)
                     [Transcription]; COG5095"
                     /db_xref="CDD:227426"
     Region          214..430
                     /region_name="TAF6C"
                     /note="C-terminal domain of TATA Binding Protein (TBP)
                     Associated Factor 6 (TAF6); cd08050"
                     /db_xref="CDD:381749"
     Site            order(218..220,222..223,226,237..238,241,245,248..249,255)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:381749"
     Region          218..249
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:381749"
     Region          256..291
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:381749"
     Region          301..344
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:381749"
     Region          351..383
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:381749"
     Region          385..429
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:381749"
     Region          613..>674
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..678
                     /gene="TAF6"
                     /coded_by="XM_061153589.1:208..2244"
                     /db_xref="GeneID:133063792"
ORIGIN      
        1 maeekklkls ntvlpsesmk vvaesmgiaq iqeetcqllt devsyrikei aqdalkfmhm
       61 gkrqklttsd idyalklknv eplygfhaqe fipfrfasgg grelyfyeek evdlsdiint
      121 plprvpldvc lkahwlsieg cqpaipenpp papkeqqkae ateplksakp gqeedgplkg
      181 kgqgaapadg kgkekkappl legaplrlkp rsihelsveq qlyykeitea cvgsceakra
      241 ealqsiatdp glyqmlprfs tfisegvrvn vvqnnlalli ylmrmvkalm dnptlyleky
      301 vhelipavmt civsrqlclr pdvdnhwalr dfaarlvaqi ckhfstttnn iqsritktft
      361 kswvdektpw ttrygsiagl aelghdvikt lilprlqqeg erirgvldgp vlsnidriga
      421 dhvqslllkh capvlaklrp ppdnqdayra efgslgpllc shvvkaraqa alqaqqvnrt
      481 tltitqprpt ltlsqapqpg prtpgllkvp gsialpvqtl vsaraaappq psppptkfiv
      541 msssstasst qqvlslstsa pgsgstttsp vtttvpsvqp ivklvstatt tppstapsgp
      601 gsvqkyivvs lpptgegkgg ptshpspapt pssapsplgg salcggkpea gespppapgt
      661 pkangsqppg agsplpap
//
LOCUS       XP_061009573             678 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription initiation factor TFIID subunit 6 isoform X3 [Dama
            dama].
ACCESSION   XP_061009573
VERSION     XP_061009573.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153590.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..678
                     /product="transcription initiation factor TFIID subunit 6
                     isoform X3"
                     /calculated_mol_wt=72455
     Region          9..408
                     /region_name="TAF6"
                     /note="Transcription initiation factor TFIID, subunit TAF6
                     (also component of histone acetyltransferase SAGA)
                     [Transcription]; COG5095"
                     /db_xref="CDD:227426"
     Region          214..430
                     /region_name="TAF6C"
                     /note="C-terminal domain of TATA Binding Protein (TBP)
                     Associated Factor 6 (TAF6); cd08050"
                     /db_xref="CDD:381749"
     Site            order(218..220,222..223,226,237..238,241,245,248..249,255)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:381749"
     Region          218..249
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:381749"
     Region          256..291
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:381749"
     Region          301..344
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:381749"
     Region          351..383
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:381749"
     Region          385..429
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:381749"
     Region          613..>674
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..678
                     /gene="TAF6"
                     /coded_by="XM_061153590.1:388..2424"
                     /db_xref="GeneID:133063792"
ORIGIN      
        1 maeekklkls ntvlpsesmk vvaesmgiaq iqeetcqllt devsyrikei aqdalkfmhm
       61 gkrqklttsd idyalklknv eplygfhaqe fipfrfasgg grelyfyeek evdlsdiint
      121 plprvpldvc lkahwlsieg cqpaipenpp papkeqqkae ateplksakp gqeedgplkg
      181 kgqgaapadg kgkekkappl legaplrlkp rsihelsveq qlyykeitea cvgsceakra
      241 ealqsiatdp glyqmlprfs tfisegvrvn vvqnnlalli ylmrmvkalm dnptlyleky
      301 vhelipavmt civsrqlclr pdvdnhwalr dfaarlvaqi ckhfstttnn iqsritktft
      361 kswvdektpw ttrygsiagl aelghdvikt lilprlqqeg erirgvldgp vlsnidriga
      421 dhvqslllkh capvlaklrp ppdnqdayra efgslgpllc shvvkaraqa alqaqqvnrt
      481 tltitqprpt ltlsqapqpg prtpgllkvp gsialpvqtl vsaraaappq psppptkfiv
      541 msssstasst qqvlslstsa pgsgstttsp vtttvpsvqp ivklvstatt tppstapsgp
      601 gsvqkyivvs lpptgegkgg ptshpspapt pssapsplgg salcggkpea gespppapgt
      661 pkangsqppg agsplpap
//
LOCUS       XP_061009574             719 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA replication licensing factor MCM7 isoform X1 [Dama dama].
ACCESSION   XP_061009574
VERSION     XP_061009574.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153591.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..719
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..719
                     /product="DNA replication licensing factor MCM7 isoform
                     X1"
                     /calculated_mol_wt=81125
     Region          10..103
                     /region_name="MCM_N"
                     /note="MCM N-terminal domain; pfam14551"
                     /db_xref="CDD:464206"
     Region          145..641
                     /region_name="MCM"
                     /note="minichromosome maintenance proteins; smart00350"
                     /db_xref="CDD:214631"
     Site            order(343,367..369,383,388..389,392,396,403,405,407,409,
                     412..413,420,423,426..427,429,431,438,446,449,452,456,
                     459..460,463,468..472,475..476,478..479,481,493..494,510,
                     513,523,525,527,530..531,534,537..538,541..542,544,556,
                     572..575,578,582,585..586,589..590,602..604,610)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:350664"
     Site            order(343..345,383..389,514,537,604)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350664"
     Site            order(412,471..472)
                     /site_type="other"
                     /note="nucleic acid binding site [nucleotide binding]"
                     /db_xref="CDD:350664"
     CDS             1..719
                     /gene="MCM7"
                     /coded_by="XM_061153591.1:127..2286"
                     /db_xref="GeneID:133063793"
ORIGIN      
        1 malkdyvlek ekvkkflqef yqdeesgkkq fkygnqlvql ahreqvamyv dlddiaeddp
       61 elvdsicent kryarlfada vqellpqyke revvnkdvld vyiehrlmme qrsrdpgaar
      121 spqnqyppel mrrfelyfqg pssskprvir evradsvgkl vtvrgivtrv sevkprmvva
      181 tytcdqcgae tyqpiqsptf mplimcpsqe cqtnrsggrl ylqtrgskfi kfqemkmqeh
      241 sdqvpvgnip rsitvlvege ntriaqpgdh vsvtgiflpi lragfrqmvq gllsetylea
      301 hrivkmskse edesaagels reelrqiaee dfyeklaasi apeiyghedv kkalllllvg
      361 gvdqsprgmk irgniniclm gdpgvaksql lsyidrlapr sqyttgrgss gvgltaavlr
      421 dsvsgeltle ggalvladqg vccidefdkm aeadrtaihe vmeqqtisia kagilttlna
      481 rcsilaaanp aygrynprrs leqniqlpaa llsrfdllwl iqdrpdrdnd lrlaqhityv
      541 hqhsrqppaq fepldmklmr ryiamcrekq pavpeslady itaayvemrr eawaskdaty
      601 tsartllail rlstalarlr mvdtvekedv neairlmems kdsllgdkgq tartqrpadv
      661 ifatvrelvs egqsvrfsea eqrcisrgft paqfqaalde yeelnvwqvn tartritfv
//
LOCUS       XP_061009575             672 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA replication licensing factor MCM7 isoform X2 [Dama dama].
ACCESSION   XP_061009575
VERSION     XP_061009575.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153592.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..672
                     /product="DNA replication licensing factor MCM7 isoform
                     X2"
                     /calculated_mol_wt=75480
     Region          <2..56
                     /region_name="MCM_N"
                     /note="MCM N-terminal domain; pfam14551"
                     /db_xref="CDD:464206"
     Region          98..594
                     /region_name="MCM"
                     /note="minichromosome maintenance proteins; smart00350"
                     /db_xref="CDD:214631"
     Site            order(296,320..322,336,341..342,345,349,356,358,360,362,
                     365..366,373,376,379..380,382,384,391,399,402,405,409,
                     412..413,416,421..425,428..429,431..432,434,446..447,463,
                     466,476,478,480,483..484,487,490..491,494..495,497,509,
                     525..528,531,535,538..539,542..543,555..557,563)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:350664"
     Site            order(296..298,336..342,467,490,557)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350664"
     Site            order(365,424..425)
                     /site_type="other"
                     /note="nucleic acid binding site [nucleotide binding]"
                     /db_xref="CDD:350664"
     CDS             1..672
                     /gene="MCM7"
                     /coded_by="XM_061153592.1:228..2246"
                     /db_xref="GeneID:133063793"
ORIGIN      
        1 myvdlddiae ddpelvdsic entkryarlf adavqellpq ykerevvnkd vldvyiehrl
       61 mmeqrsrdpg aarspqnqyp pelmrrfely fqgpssskpr virevradsv gklvtvrgiv
      121 trvsevkprm vvatytcdqc gaetyqpiqs ptfmplimcp sqecqtnrsg grlylqtrgs
      181 kfikfqemkm qehsdqvpvg niprsitvlv egentriaqp gdhvsvtgif lpilragfrq
      241 mvqgllsety leahrivkms kseedesaag elsreelrqi aeedfyekla asiapeiygh
      301 edvkkallll lvggvdqspr gmkirgnini clmgdpgvak sqllsyidrl aprsqyttgr
      361 gssgvgltaa vlrdsvsgel tleggalvla dqgvccidef dkmaeadrta ihevmeqqti
      421 siakagiltt lnarcsilaa anpaygrynp rrsleqniql paallsrfdl lwliqdrpdr
      481 dndlrlaqhi tyvhqhsrqp paqfepldmk lmrryiamcr ekqpavpesl adyitaayve
      541 mrreawaskd atytsartll ailrlstala rlrmvdtvek edvneairlm emskdsllgd
      601 kgqtartqrp advifatvre lvsegqsvrf seaeqrcisr gftpaqfqaa ldeyeelnvw
      661 qvntartrit fv
//
LOCUS       XP_061009576             672 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA replication licensing factor MCM7 isoform X2 [Dama dama].
ACCESSION   XP_061009576
VERSION     XP_061009576.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153593.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..672
                     /product="DNA replication licensing factor MCM7 isoform
                     X2"
                     /calculated_mol_wt=75480
     Region          <2..56
                     /region_name="MCM_N"
                     /note="MCM N-terminal domain; pfam14551"
                     /db_xref="CDD:464206"
     Region          98..594
                     /region_name="MCM"
                     /note="minichromosome maintenance proteins; smart00350"
                     /db_xref="CDD:214631"
     Site            order(296,320..322,336,341..342,345,349,356,358,360,362,
                     365..366,373,376,379..380,382,384,391,399,402,405,409,
                     412..413,416,421..425,428..429,431..432,434,446..447,463,
                     466,476,478,480,483..484,487,490..491,494..495,497,509,
                     525..528,531,535,538..539,542..543,555..557,563)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:350664"
     Site            order(296..298,336..342,467,490,557)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350664"
     Site            order(365,424..425)
                     /site_type="other"
                     /note="nucleic acid binding site [nucleotide binding]"
                     /db_xref="CDD:350664"
     CDS             1..672
                     /gene="MCM7"
                     /coded_by="XM_061153593.1:156..2174"
                     /db_xref="GeneID:133063793"
ORIGIN      
        1 myvdlddiae ddpelvdsic entkryarlf adavqellpq ykerevvnkd vldvyiehrl
       61 mmeqrsrdpg aarspqnqyp pelmrrfely fqgpssskpr virevradsv gklvtvrgiv
      121 trvsevkprm vvatytcdqc gaetyqpiqs ptfmplimcp sqecqtnrsg grlylqtrgs
      181 kfikfqemkm qehsdqvpvg niprsitvlv egentriaqp gdhvsvtgif lpilragfrq
      241 mvqgllsety leahrivkms kseedesaag elsreelrqi aeedfyekla asiapeiygh
      301 edvkkallll lvggvdqspr gmkirgnini clmgdpgvak sqllsyidrl aprsqyttgr
      361 gssgvgltaa vlrdsvsgel tleggalvla dqgvccidef dkmaeadrta ihevmeqqti
      421 siakagiltt lnarcsilaa anpaygrynp rrsleqniql paallsrfdl lwliqdrpdr
      481 dndlrlaqhi tyvhqhsrqp paqfepldmk lmrryiamcr ekqpavpesl adyitaayve
      541 mrreawaskd atytsartll ailrlstala rlrmvdtvek edvneairlm emskdsllgd
      601 kgqtartqrp advifatvre lvsegqsvrf seaeqrcisr gftpaqfqaa ldeyeelnvw
      661 qvntartrit fv
//
LOCUS       XP_061009577             669 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA replication licensing factor MCM7 isoform X3 [Dama dama].
ACCESSION   XP_061009577
VERSION     XP_061009577.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153594.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..669
                     /product="DNA replication licensing factor MCM7 isoform
                     X3"
                     /calculated_mol_wt=75729
     Region          10..103
                     /region_name="MCM_N"
                     /note="MCM N-terminal domain; pfam14551"
                     /db_xref="CDD:464206"
     Region          145..591
                     /region_name="MCM"
                     /note="MCM helicase family; cl28901"
                     /db_xref="CDD:475121"
     Site            order(293,317..319,333,338..339,342,346,353,355,357,359,
                     362..363,370,373,376..377,379,381,388,396,399,402,406,
                     409..410,413,418..422,425..426,428..429,431,443..444,460,
                     463,473,475,477,480..481,484,487..488,491..492,494,506,
                     522..525,528,532,535..536,539..540,552..554,560)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:350664"
     Site            order(293..295,333..339,464,487,554)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350664"
     Site            order(362,421..422)
                     /site_type="other"
                     /note="nucleic acid binding site [nucleotide binding]"
                     /db_xref="CDD:350664"
     CDS             1..669
                     /gene="MCM7"
                     /coded_by="XM_061153594.1:127..2136"
                     /db_xref="GeneID:133063793"
ORIGIN      
        1 malkdyvlek ekvkkflqef yqdeesgkkq fkygnqlvql ahreqvamyv dlddiaeddp
       61 elvdsicent kryarlfada vqellpqyke revvnkdvld vyiehrlmme qrsrdpgaar
      121 spqnqyppel mrrfelyfqg pssskprvir evradsvgkl vtvrgivtrv sevkprmvva
      181 tytcdqcgae tyqpiqsptf mplimcpsqe cqtnrsggrl ylqtrgskfi kfqemkmqeh
      241 gllsetylea hrivkmskse edesaagels reelrqiaee dfyeklaasi apeiyghedv
      301 kkalllllvg gvdqsprgmk irgniniclm gdpgvaksql lsyidrlapr sqyttgrgss
      361 gvgltaavlr dsvsgeltle ggalvladqg vccidefdkm aeadrtaihe vmeqqtisia
      421 kagilttlna rcsilaaanp aygrynprrs leqniqlpaa llsrfdllwl iqdrpdrdnd
      481 lrlaqhityv hqhsrqppaq fepldmklmr ryiamcrekq pavpeslady itaayvemrr
      541 eawaskdaty tsartllail rlstalarlr mvdtvekedv neairlmems kdsllgdkgq
      601 tartqrpadv ifatvrelvs egqsvrfsea eqrcisrgft paqfqaalde yeelnvwqvn
      661 tartritfv
//
LOCUS       XP_061009578             452 aa            linear   MAM 02-DEC-2023
DEFINITION  AP-4 complex subunit mu-1 isoform X1 [Dama dama].
ACCESSION   XP_061009578
VERSION     XP_061009578.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153595.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..452
                     /product="AP-4 complex subunit mu-1 isoform X1"
                     /calculated_mol_wt=49697
     Region          3..141
                     /region_name="AP4_Mu_N"
                     /note="AP-4 complex subunit mu N-terminal domain; cd14838"
                     /db_xref="CDD:341442"
     Site            order(18,21,45..46,55,57,59,71..73,75..77,80,84,110..111,
                     114..115,117..119,121..124,133,135..136)
                     /site_type="other"
                     /note="putative AP-4 beta interface [polypeptide binding]"
                     /db_xref="CDD:341442"
     Region          175..452
                     /region_name="AP-4_Mu4_Cterm"
                     /note="C-terminal domain of medium Mu4 subunit in adaptor
                     protein (AP) complex AP-4; cd09253"
                     /db_xref="CDD:271161"
     Site            order(188..190,217,328,409,411,420,437..440,442)
                     /site_type="other"
                     /note="putative signal peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271161"
     Site            order(254..257,259,261,264..265,280,283)
                     /site_type="signal peptide"
                     /note="signal peptide binding site [polypeptide binding]"
                     /db_xref="CDD:271161"
     CDS             1..452
                     /gene="AP4M1"
                     /coded_by="XM_061153595.1:152..1510"
                     /db_xref="GeneID:133063795"
ORIGIN      
        1 misqffilss kgdpliykdf rgdsggrdva elfyrkltgl pgdespvvmh hddrhfihir
       61 hsglylvatt senispfsll ellsrlatll gdycgslgea tisrnvalvy elldevldyg
      121 yvqttstevl rnfiqteavi skpfslfdls svglfgaetq qskvapssaa srpvlssrsd
      181 qsqknevfld vverlsvlia sngsllkvdv qgeirlksfl psgsemrigl teefcvgkse
      241 lrgygpgirv devsfhssvy ldefeshril rlqppqgelt vmryqlsddl psplpfrlfp
      301 svqwdrgsgr lqvylklrcd lppksqalnv rlhlplprgv vslsqelssp eqkaelaega
      361 lrwdlprvqg gsqlsglfqm dvpglpgppg qgpsasaplg lgpaslsfel prhtcsglqv
      421 rflrlafrpc gsasphkwvr hlshsdayvi ri
//
LOCUS       XP_061009579             435 aa            linear   MAM 02-DEC-2023
DEFINITION  AP-4 complex subunit mu-1 isoform X2 [Dama dama].
ACCESSION   XP_061009579
VERSION     XP_061009579.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153596.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..435
                     /product="AP-4 complex subunit mu-1 isoform X2"
                     /calculated_mol_wt=47846
     Region          3..141
                     /region_name="AP4_Mu_N"
                     /note="AP-4 complex subunit mu N-terminal domain; cd14838"
                     /db_xref="CDD:341442"
     Site            order(18,21,45..46,55,57,59,71..73,75..77,80,84,110..111,
                     114..115,117..119,121..124,133,135..136)
                     /site_type="other"
                     /note="putative AP-4 beta interface [polypeptide binding]"
                     /db_xref="CDD:341442"
     Region          175..435
                     /region_name="AP_MHD_Cterm"
                     /note="C-terminal domain of adaptor protein (AP) complexes
                     medium mu subunits and its homologs (MHD); cl10970"
                     /db_xref="CDD:472082"
     CDS             1..435
                     /gene="AP4M1"
                     /coded_by="XM_061153596.1:152..1459"
                     /db_xref="GeneID:133063795"
ORIGIN      
        1 misqffilss kgdpliykdf rgdsggrdva elfyrkltgl pgdespvvmh hddrhfihir
       61 hsglylvatt senispfsll ellsrlatll gdycgslgea tisrnvalvy elldevldyg
      121 yvqttstevl rnfiqteavi skpfslfdls svglfgaetq qskvapssaa srpvlssrsd
      181 qsqknevfld vverlsvlia sngsllkvdv qgeirlksfl psgsemrigl teefcvgkse
      241 lrgygpgirv devsfhssvy ldefeshril rlqppqgelt vmryqlsddl psplpfrlfp
      301 svqwdrgsgr lqvylklrcd lppkslsqel sspeqkaela egalrwdlpr vqggsqlsgl
      361 fqmdvpglpg ppgqgpsasa plglgpasls felprhtcsg lqvrflrlaf rpcgsasphk
      421 wvrhlshsda yviri
//
LOCUS       XP_061009580             425 aa            linear   MAM 02-DEC-2023
DEFINITION  AP-4 complex subunit mu-1 isoform X3 [Dama dama].
ACCESSION   XP_061009580
VERSION     XP_061009580.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153597.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..425
                     /product="AP-4 complex subunit mu-1 isoform X3"
                     /calculated_mol_wt=46450
     Region          3..141
                     /region_name="AP4_Mu_N"
                     /note="AP-4 complex subunit mu N-terminal domain; cd14838"
                     /db_xref="CDD:341442"
     Site            order(18,21,45..46,55,57,59,71..73,75..77,80,84,110..111,
                     114..115,117..119,121..124,133,135..136)
                     /site_type="other"
                     /note="putative AP-4 beta interface [polypeptide binding]"
                     /db_xref="CDD:341442"
     Region          175..419
                     /region_name="AP_MHD_Cterm"
                     /note="C-terminal domain of adaptor protein (AP) complexes
                     medium mu subunits and its homologs (MHD); cl10970"
                     /db_xref="CDD:472082"
     CDS             1..425
                     /gene="AP4M1"
                     /coded_by="XM_061153597.1:152..1429"
                     /db_xref="GeneID:133063795"
ORIGIN      
        1 misqffilss kgdpliykdf rgdsggrdva elfyrkltgl pgdespvvmh hddrhfihir
       61 hsglylvatt senispfsll ellsrlatll gdycgslgea tisrnvalvy elldevldyg
      121 yvqttstevl rnfiqteavi skpfslfdls svglfgaetq qskvapssaa srpvlssrsd
      181 qsqknevfld vverlsvlia sngsllkvdv qgeirlksfl psgsemrigl teefcvgkse
      241 lrgygpgirv devsfhssvy ldefeshril rlqppqgelt vmryqlsddl psplpfrlfp
      301 svqwdrgsgr lqvylklrcd lppksqalnv rlhlplprgv vslsqelssp eqkaelaega
      361 lrwdlprvqg gsqlsglfqm dvpglpgppg qgpsasaplg lgpaslsfel prhtcsglqc
      421 sppra
//
LOCUS       XP_061009581             324 aa            linear   MAM 02-DEC-2023
DEFINITION  COP9 signalosome complex subunit 6 isoform X1 [Dama dama].
ACCESSION   XP_061009581
VERSION     XP_061009581.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153598.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..324
                     /product="COP9 signalosome complex subunit 6 isoform X1"
                     /calculated_mol_wt=35835
     Region          36..318
                     /region_name="MPN_CSN6"
                     /note="Mpr1p, Pad1p N-terminal (MPN) domains without
                     catalytic isopeptidase activity, found in COP9 signalosome
                     complex subunit 6; cd08063"
                     /db_xref="CDD:163694"
     CDS             1..324
                     /gene="COPS6"
                     /coded_by="XM_061153598.1:33..1007"
                     /db_xref="GeneID:133063797"
ORIGIN      
        1 maataaaang tggssgmevd aavvpsvmas gvtgsvsval hplvilnisd hwirmrsqeg
       61 rpmqvigali gkqegrniev mnsfellsht veekiiidke yyytkeeqfk qvfkeleflg
      121 wyttggppdp sdihvhkqvc eiiesplflk lnpmtkhtdl pvsvfesvid iingeatmlf
      181 aeltytlate eaerigvdhv armtatgsge nstvaehlia qhsaikmlhs rvklileyvk
      241 aseagevpfn heilreayal chclpvlstd kfktdfydqc ndvglmaylg titktcntmn
      301 qfvnkfnvly drqgigrrmr glff
//
LOCUS       XP_061009582             280 aa            linear   MAM 02-DEC-2023
DEFINITION  COP9 signalosome complex subunit 6 isoform X2 [Dama dama].
ACCESSION   XP_061009582
VERSION     XP_061009582.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153599.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..280
                     /product="COP9 signalosome complex subunit 6 isoform X2"
                     /calculated_mol_wt=30646
     Region          36..274
                     /region_name="MPN_CSN6"
                     /note="Mpr1p, Pad1p N-terminal (MPN) domains without
                     catalytic isopeptidase activity, found in COP9 signalosome
                     complex subunit 6; cd08063"
                     /db_xref="CDD:163694"
     CDS             1..280
                     /gene="COPS6"
                     /coded_by="XM_061153599.1:33..875"
                     /db_xref="GeneID:133063797"
ORIGIN      
        1 maataaaang tggssgmevd aavvpsvmas gvtgsvsval hplvilnisd hwirmrsqeg
       61 rpmqvkqvfk eleflgwytt ggppdpsdih vhkqvceiie splflklnpm tkhtdlpvsv
      121 fesvidiing eatmlfaelt ytlateeaer igvdhvarmt atgsgenstv aehliaqhsa
      181 ikmlhsrvkl ileyvkasea gevpfnheil reayalchcl pvlstdkfkt dfydqcndvg
      241 lmaylgtitk tcntmnqfvn kfnvlydrqg igrrmrglff
//
LOCUS       XP_061009583             475 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase TRIM4 [Dama dama].
ACCESSION   XP_061009583
VERSION     XP_061009583.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153600.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..475
                     /product="E3 ubiquitin-protein ligase TRIM4"
                     /calculated_mol_wt=53848
     Region          4..64
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(12,15,27,29,32,35,49,52)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     Region          85..122
                     /region_name="Bbox2_TRIM4-like"
                     /note="B-box-type 2 zinc finger found in tripartite
                     motif-containing proteins, TRIM4, TRIM17, TRIM41, TRIM52
                     and similar proteins; cd19760"
                     /db_xref="CDD:380818"
     Region          279..469
                     /region_name="SPRY_PRY_TRIM4"
                     /note="PRY/SPRY domain in tripartite motif-binding protein
                     4 (TRIM4), also known as RING finger protein 87 (RNF87);
                     cd15809"
                     /db_xref="CDD:293981"
     CDS             1..475
                     /gene="TRIM4"
                     /coded_by="XM_061153600.1:456..1883"
                     /db_xref="GeneID:133063798"
ORIGIN      
        1 meaedfqeel tcaicldyfe dpvsiecghn fcrgclcrtw apggspvrcp ecrrpsapas
       61 mrpnwalarl terirrrrlg pvpaglcgrh weplrlfced dqrlvclvcr esqehqahtm
      121 apadeafksy rekllktqss ltakmkkvmh fqdmevknaa ewkekmknqr mrviaefakl
      181 hvllteeeql flqglrqeee etkkkqseni frlnqmitsl ktlilevkek sqgstlellq
      241 npaevltrce nqdvnyssed ltvktvcrlp mmkemlkrfq vavnlaedta hsklvfsqeg
      301 ryvkngasas swplfftaws yatgwrnpqr ttgfverfqh lpcvlgknvf tsgkhyweve
      361 nrgsqevaag vcredimgip ggstmcpkvg iwavcwssag yrpltgssvs ptkrepalqr
      421 vgvfldhgar evsfynavdg eylhtfscss ssrlrpffwl splasvvipp vtggk
//
LOCUS       XP_061009585             321 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc-alpha-2-glycoprotein [Dama dama].
ACCESSION   XP_061009585
VERSION     XP_061009585.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153602.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..321
                     /product="zinc-alpha-2-glycoprotein"
                     /calculated_mol_wt=35852
     Region          45..220
                     /region_name="MHC_I"
                     /note="Class I Histocompatibility antigen, domains alpha 1
                     and 2; cl08246"
                     /db_xref="CDD:471794"
     Region          222..314
                     /region_name="IgC1_MHC-like_ZAG"
                     /note="Immunoglobulin domain of Zn-alpha2-glycoprotein
                     (ZAG); member of the C1-set of Ig superfamily (IgSF)
                     domains; cd21010"
                     /db_xref="CDD:409601"
     Region          225..233
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409601"
     Region          241..250
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409601"
     Region          254..260
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409601"
     Region          262..265
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409601"
     Region          268..276
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409601"
     Region          279..289
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409601"
     Region          296..303
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409601"
     Region          310..314
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409601"
     CDS             1..321
                     /gene="AZGP1"
                     /coded_by="XM_061153602.1:56..1021"
                     /db_xref="GeneID:133063799"
ORIGIN      
        1 mlsaassqdr gspgpsiwtv stmvpvllsl llllgpavpk etqagnysls flytglskph
       61 qgsprfqava ylndqpffhy dsegrraepl apwsqvegme dwekesalqr aredifmetl
      121 sdimdyykds egshtfqgaf gcelrnneis gafwvyaydg rdfikfdkei pawvpldpaa
      181 qntkrkweae avyvqrakay leeecpgmlq rylpysrthl drqespsvsv tghaapghkr
      241 tlkclaydfy prsirlhwtr agdaqeaesg gdvlpsgngt yqswvvvgvp sedpapysch
      301 vehgslarpl tvpwdpqqqa q
//
LOCUS       XP_061009586             276 aa            linear   MAM 02-DEC-2023
DEFINITION  gap junction gamma-3 protein [Dama dama].
ACCESSION   XP_061009586
VERSION     XP_061009586.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153603.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..276
                     /product="gap junction gamma-3 protein"
                     /calculated_mol_wt=30204
     Region          <48..203
                     /region_name="Connexin"
                     /note="pfam00029"
                     /db_xref="CDD:459638"
     CDS             1..276
                     /gene="GJC3"
                     /coded_by="XM_061153603.1:93..923"
                     /db_xref="GeneID:133063800"
ORIGIN      
        1 mcgsflrrva aeesrhptpv grlllpallg lrlvllaagg tgvfgggeeq sefvchtqqa
       61 gcktvcydaf hplsplrfwa fqvtlvavps alymgfilyh viwhweasek gkteeetlsg
      121 qgekggeasg agssrllway vaqlgvrlal egaalggqyh lygftmptsf vcrlepclgs
      181 tncyrsrpse ktiflktmfg vtglcllftl lelvllglgr wwriwrhksp ssnysltses
      241 vkrrkaptdn fpvveirerp gepgergsev ppsarp
//
LOCUS       XP_061009587             510 aa            linear   MAM 02-DEC-2023
DEFINITION  cytochrome P450 3A28 [Dama dama].
ACCESSION   XP_061009587
VERSION     XP_061009587.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153604.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..510
                     /product="cytochrome P450 3A28"
                     /calculated_mol_wt=58217
     Region          67..499
                     /region_name="CYP3A"
                     /note="cytochrome P450 family 3, subfamily A; cd20650"
                     /db_xref="CDD:410743"
     Site            order(76,105..108,119..120,217,219..220,222,227,248,308,
                     311..312,316,377..379,381,488..489)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410743"
     Site            order(105,118..119,126,130,137,309,312..313,316,377,380,
                     382,441..444,447..451,455)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410743"
     CDS             1..510
                     /gene="LOC133063801"
                     /coded_by="XM_061153604.1:393..1925"
                     /db_xref="GeneID:133063801"
ORIGIN      
        1 melipsfsve twvllatslv llyvygtysy glfkklgipg prpvpyfgst ldyhkgiqef
       61 dnqcfkkygk mwgfyegrqp mlavtdpdii ktvlvkecys vftnrrvfgp mgimknaisl
      121 awdeqwkrir tllspaftsg klkemiyfms rcspiiaqyg dvlvrnlrke aekgnpvnmk
      181 dmfgaysmdv itgtafgvni dslnnphdpf veysknllkf rpfdplilsi ilfpflnpvf
      241 eilnitlfpk stvdfftksv kkikesrltd kqtnrvdllq lminsqnske idthkalsdi
      301 elvaqsiifi fggyettssi lsfiiyeltt hpdvqqklqe eidatfpnka pptydalvqm
      361 eyldmvvnet lrmfpiagrl ervckkdvei hgvsipkgtt vlvplfvlhn npelwpepee
      421 frperfsrkn kdsinpyvyl pfgtgprnci gmrfafmnik lalvrmlqnf sfkpcketqi
      481 plklytqglt qpeqpvilkv vprdgttsga
//
LOCUS       XP_061009588             832 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein with KRAB and SCAN domains 5 isoform X1 [Dama
            dama].
ACCESSION   XP_061009588
VERSION     XP_061009588.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153605.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..832
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..832
                     /product="zinc finger protein with KRAB and SCAN domains 5
                     isoform X1"
                     /calculated_mol_wt=95136
     Region          46..155
                     /region_name="SCAN"
                     /note="leucine rich region; smart00431"
                     /db_xref="CDD:128708"
     Region          222..>260
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          349..369
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(354,356,358,360..361,364..365,368,382,384,388..389,
                     392..393,396,410,412,414,416..417,420..421,424)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          361..386
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          377..397
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(377,380,393,397)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          389..412
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          405..425
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          433..453
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          540..>832
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          552..572
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(557,559,561,563..564,567..568,571,585,587,591..592,
                     595..596,599,613,615,617,619..620,623..624,627)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          580..600
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(580,583,596,600)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          608..628
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          636..656
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          664..684
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          720..740
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(725,727,729,731..732,735..736,739,781,783,787..788,
                     791..792,795,809,811,813,815..816,819..820,823)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          748..796
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(748,779,792,796)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          804..824
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..832
                     /gene="ZKSCAN5"
                     /coded_by="XM_061153605.1:603..3101"
                     /db_xref="GeneID:133063802"
ORIGIN      
        1 mimtgsgevi dldppsessp eqedllivkv eeedctwmqe ysppvfetfy qrfkhfqyhe
       61 asgprealsq lrvlccewlr pelhtkeqil ellvleqflt ilpeqfqtwv rehhpesgee
      121 avavveniqr eleerqqqiv acpeglppks vppgagpesf shqllpvdpq aehepqgphl
      181 leedalpalq vsslplkdsq eltasllstg sqklvkiedv advavsfile ewghldqsqk
      241 slyrddrken ygsmtsmdye srndnveltv khisdeaess wmtsggpert vpssqefgev
      301 ndlhgmverw qvhppggrsr qtppqkrelg aitdvtrkpp tggerghrcn dcgkfflqas
      361 nfiqhrriht gekpfkcgec gksynqrvhl tqhqrvhtge kpytcqvcgk afrvsshlvq
      421 hhsvhsgerp ygcpecgksf grhshliehl krhfreksqr cgsrrskntk lnvkkkisef
      481 seadmeptgr lqrnvspvqd fgeghehqgk lerkqgmsmk eilgqpsskr mnfsevtyah
      541 kkpstgerph kcnecgksfi qsahliqhqr ihtgekpfrc decgksynqr vhltqhqrvh
      601 tgekpytcpl cgkafrvrsh lvqhqsvhsg erpfkcnecg kgfgrrshla ghlrlhsrek
      661 shqchecgev ffqyvslieh qvlhmgqkne qngvceeays wnltviedkk ielqeqpykc
      721 dvcgkafhys sdliqhyrth taektykcnl cgesvgqcph inqypksyss lkahqcnecg
      781 rgfalqshln qhqrihtaek pfqckecgms fswscslfkh lrshertdpi kt
//
LOCUS       XP_061009589             832 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein with KRAB and SCAN domains 5 isoform X1 [Dama
            dama].
ACCESSION   XP_061009589
VERSION     XP_061009589.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153606.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..832
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..832
                     /product="zinc finger protein with KRAB and SCAN domains 5
                     isoform X1"
                     /calculated_mol_wt=95136
     Region          46..155
                     /region_name="SCAN"
                     /note="leucine rich region; smart00431"
                     /db_xref="CDD:128708"
     Region          222..>260
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          349..369
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(354,356,358,360..361,364..365,368,382,384,388..389,
                     392..393,396,410,412,414,416..417,420..421,424)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          361..386
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          377..397
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(377,380,393,397)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          389..412
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          405..425
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          433..453
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          540..>832
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          552..572
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(557,559,561,563..564,567..568,571,585,587,591..592,
                     595..596,599,613,615,617,619..620,623..624,627)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          580..600
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(580,583,596,600)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          608..628
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          636..656
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          664..684
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          720..740
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(725,727,729,731..732,735..736,739,781,783,787..788,
                     791..792,795,809,811,813,815..816,819..820,823)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          748..796
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(748,779,792,796)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          804..824
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..832
                     /gene="ZKSCAN5"
                     /coded_by="XM_061153606.1:184..2682"
                     /db_xref="GeneID:133063802"
ORIGIN      
        1 mimtgsgevi dldppsessp eqedllivkv eeedctwmqe ysppvfetfy qrfkhfqyhe
       61 asgprealsq lrvlccewlr pelhtkeqil ellvleqflt ilpeqfqtwv rehhpesgee
      121 avavveniqr eleerqqqiv acpeglppks vppgagpesf shqllpvdpq aehepqgphl
      181 leedalpalq vsslplkdsq eltasllstg sqklvkiedv advavsfile ewghldqsqk
      241 slyrddrken ygsmtsmdye srndnveltv khisdeaess wmtsggpert vpssqefgev
      301 ndlhgmverw qvhppggrsr qtppqkrelg aitdvtrkpp tggerghrcn dcgkfflqas
      361 nfiqhrriht gekpfkcgec gksynqrvhl tqhqrvhtge kpytcqvcgk afrvsshlvq
      421 hhsvhsgerp ygcpecgksf grhshliehl krhfreksqr cgsrrskntk lnvkkkisef
      481 seadmeptgr lqrnvspvqd fgeghehqgk lerkqgmsmk eilgqpsskr mnfsevtyah
      541 kkpstgerph kcnecgksfi qsahliqhqr ihtgekpfrc decgksynqr vhltqhqrvh
      601 tgekpytcpl cgkafrvrsh lvqhqsvhsg erpfkcnecg kgfgrrshla ghlrlhsrek
      661 shqchecgev ffqyvslieh qvlhmgqkne qngvceeays wnltviedkk ielqeqpykc
      721 dvcgkafhys sdliqhyrth taektykcnl cgesvgqcph inqypksyss lkahqcnecg
      781 rgfalqshln qhqrihtaek pfqckecgms fswscslfkh lrshertdpi kt
//
LOCUS       XP_061009590             832 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein with KRAB and SCAN domains 5 isoform X1 [Dama
            dama].
ACCESSION   XP_061009590
VERSION     XP_061009590.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153607.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..832
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..832
                     /product="zinc finger protein with KRAB and SCAN domains 5
                     isoform X1"
                     /calculated_mol_wt=95136
     Region          46..155
                     /region_name="SCAN"
                     /note="leucine rich region; smart00431"
                     /db_xref="CDD:128708"
     Region          222..>260
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          349..369
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(354,356,358,360..361,364..365,368,382,384,388..389,
                     392..393,396,410,412,414,416..417,420..421,424)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          361..386
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          377..397
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(377,380,393,397)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          389..412
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          405..425
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          433..453
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          540..>832
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          552..572
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(557,559,561,563..564,567..568,571,585,587,591..592,
                     595..596,599,613,615,617,619..620,623..624,627)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          580..600
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(580,583,596,600)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          608..628
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          636..656
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          664..684
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          720..740
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(725,727,729,731..732,735..736,739,781,783,787..788,
                     791..792,795,809,811,813,815..816,819..820,823)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          748..796
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(748,779,792,796)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          804..824
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..832
                     /gene="ZKSCAN5"
                     /coded_by="XM_061153607.1:600..3098"
                     /db_xref="GeneID:133063802"
ORIGIN      
        1 mimtgsgevi dldppsessp eqedllivkv eeedctwmqe ysppvfetfy qrfkhfqyhe
       61 asgprealsq lrvlccewlr pelhtkeqil ellvleqflt ilpeqfqtwv rehhpesgee
      121 avavveniqr eleerqqqiv acpeglppks vppgagpesf shqllpvdpq aehepqgphl
      181 leedalpalq vsslplkdsq eltasllstg sqklvkiedv advavsfile ewghldqsqk
      241 slyrddrken ygsmtsmdye srndnveltv khisdeaess wmtsggpert vpssqefgev
      301 ndlhgmverw qvhppggrsr qtppqkrelg aitdvtrkpp tggerghrcn dcgkfflqas
      361 nfiqhrriht gekpfkcgec gksynqrvhl tqhqrvhtge kpytcqvcgk afrvsshlvq
      421 hhsvhsgerp ygcpecgksf grhshliehl krhfreksqr cgsrrskntk lnvkkkisef
      481 seadmeptgr lqrnvspvqd fgeghehqgk lerkqgmsmk eilgqpsskr mnfsevtyah
      541 kkpstgerph kcnecgksfi qsahliqhqr ihtgekpfrc decgksynqr vhltqhqrvh
      601 tgekpytcpl cgkafrvrsh lvqhqsvhsg erpfkcnecg kgfgrrshla ghlrlhsrek
      661 shqchecgev ffqyvslieh qvlhmgqkne qngvceeays wnltviedkk ielqeqpykc
      721 dvcgkafhys sdliqhyrth taektykcnl cgesvgqcph inqypksyss lkahqcnecg
      781 rgfalqshln qhqrihtaek pfqckecgms fswscslfkh lrshertdpi kt
//
LOCUS       XP_061009591             832 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein with KRAB and SCAN domains 5 isoform X1 [Dama
            dama].
ACCESSION   XP_061009591
VERSION     XP_061009591.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153608.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..832
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..832
                     /product="zinc finger protein with KRAB and SCAN domains 5
                     isoform X1"
                     /calculated_mol_wt=95136
     Region          46..155
                     /region_name="SCAN"
                     /note="leucine rich region; smart00431"
                     /db_xref="CDD:128708"
     Region          222..>260
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          349..369
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(354,356,358,360..361,364..365,368,382,384,388..389,
                     392..393,396,410,412,414,416..417,420..421,424)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          361..386
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          377..397
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(377,380,393,397)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          389..412
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          405..425
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          433..453
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          540..>832
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          552..572
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(557,559,561,563..564,567..568,571,585,587,591..592,
                     595..596,599,613,615,617,619..620,623..624,627)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          580..600
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(580,583,596,600)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          608..628
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          636..656
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          664..684
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          720..740
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(725,727,729,731..732,735..736,739,781,783,787..788,
                     791..792,795,809,811,813,815..816,819..820,823)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          748..796
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(748,779,792,796)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          804..824
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..832
                     /gene="ZKSCAN5"
                     /coded_by="XM_061153608.1:162..2660"
                     /db_xref="GeneID:133063802"
ORIGIN      
        1 mimtgsgevi dldppsessp eqedllivkv eeedctwmqe ysppvfetfy qrfkhfqyhe
       61 asgprealsq lrvlccewlr pelhtkeqil ellvleqflt ilpeqfqtwv rehhpesgee
      121 avavveniqr eleerqqqiv acpeglppks vppgagpesf shqllpvdpq aehepqgphl
      181 leedalpalq vsslplkdsq eltasllstg sqklvkiedv advavsfile ewghldqsqk
      241 slyrddrken ygsmtsmdye srndnveltv khisdeaess wmtsggpert vpssqefgev
      301 ndlhgmverw qvhppggrsr qtppqkrelg aitdvtrkpp tggerghrcn dcgkfflqas
      361 nfiqhrriht gekpfkcgec gksynqrvhl tqhqrvhtge kpytcqvcgk afrvsshlvq
      421 hhsvhsgerp ygcpecgksf grhshliehl krhfreksqr cgsrrskntk lnvkkkisef
      481 seadmeptgr lqrnvspvqd fgeghehqgk lerkqgmsmk eilgqpsskr mnfsevtyah
      541 kkpstgerph kcnecgksfi qsahliqhqr ihtgekpfrc decgksynqr vhltqhqrvh
      601 tgekpytcpl cgkafrvrsh lvqhqsvhsg erpfkcnecg kgfgrrshla ghlrlhsrek
      661 shqchecgev ffqyvslieh qvlhmgqkne qngvceeays wnltviedkk ielqeqpykc
      721 dvcgkafhys sdliqhyrth taektykcnl cgesvgqcph inqypksyss lkahqcnecg
      781 rgfalqshln qhqrihtaek pfqckecgms fswscslfkh lrshertdpi kt
//
LOCUS       XP_061009592             832 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein with KRAB and SCAN domains 5 isoform X1 [Dama
            dama].
ACCESSION   XP_061009592
VERSION     XP_061009592.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153609.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..832
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..832
                     /product="zinc finger protein with KRAB and SCAN domains 5
                     isoform X1"
                     /calculated_mol_wt=95136
     Region          46..155
                     /region_name="SCAN"
                     /note="leucine rich region; smart00431"
                     /db_xref="CDD:128708"
     Region          222..>260
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          349..369
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(354,356,358,360..361,364..365,368,382,384,388..389,
                     392..393,396,410,412,414,416..417,420..421,424)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          361..386
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          377..397
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(377,380,393,397)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          389..412
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          405..425
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          433..453
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          540..>832
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          552..572
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(557,559,561,563..564,567..568,571,585,587,591..592,
                     595..596,599,613,615,617,619..620,623..624,627)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          580..600
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(580,583,596,600)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          608..628
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          636..656
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          664..684
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          720..740
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(725,727,729,731..732,735..736,739,781,783,787..788,
                     791..792,795,809,811,813,815..816,819..820,823)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          748..796
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(748,779,792,796)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          804..824
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..832
                     /gene="ZKSCAN5"
                     /coded_by="XM_061153609.1:125..2623"
                     /db_xref="GeneID:133063802"
ORIGIN      
        1 mimtgsgevi dldppsessp eqedllivkv eeedctwmqe ysppvfetfy qrfkhfqyhe
       61 asgprealsq lrvlccewlr pelhtkeqil ellvleqflt ilpeqfqtwv rehhpesgee
      121 avavveniqr eleerqqqiv acpeglppks vppgagpesf shqllpvdpq aehepqgphl
      181 leedalpalq vsslplkdsq eltasllstg sqklvkiedv advavsfile ewghldqsqk
      241 slyrddrken ygsmtsmdye srndnveltv khisdeaess wmtsggpert vpssqefgev
      301 ndlhgmverw qvhppggrsr qtppqkrelg aitdvtrkpp tggerghrcn dcgkfflqas
      361 nfiqhrriht gekpfkcgec gksynqrvhl tqhqrvhtge kpytcqvcgk afrvsshlvq
      421 hhsvhsgerp ygcpecgksf grhshliehl krhfreksqr cgsrrskntk lnvkkkisef
      481 seadmeptgr lqrnvspvqd fgeghehqgk lerkqgmsmk eilgqpsskr mnfsevtyah
      541 kkpstgerph kcnecgksfi qsahliqhqr ihtgekpfrc decgksynqr vhltqhqrvh
      601 tgekpytcpl cgkafrvrsh lvqhqsvhsg erpfkcnecg kgfgrrshla ghlrlhsrek
      661 shqchecgev ffqyvslieh qvlhmgqkne qngvceeays wnltviedkk ielqeqpykc
      721 dvcgkafhys sdliqhyrth taektykcnl cgesvgqcph inqypksyss lkahqcnecg
      781 rgfalqshln qhqrihtaek pfqckecgms fswscslfkh lrshertdpi kt
//
LOCUS       XP_061009593             832 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein with KRAB and SCAN domains 5 isoform X1 [Dama
            dama].
ACCESSION   XP_061009593
VERSION     XP_061009593.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153610.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..832
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..832
                     /product="zinc finger protein with KRAB and SCAN domains 5
                     isoform X1"
                     /calculated_mol_wt=95136
     Region          46..155
                     /region_name="SCAN"
                     /note="leucine rich region; smart00431"
                     /db_xref="CDD:128708"
     Region          222..>260
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          349..369
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(354,356,358,360..361,364..365,368,382,384,388..389,
                     392..393,396,410,412,414,416..417,420..421,424)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          361..386
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          377..397
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(377,380,393,397)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          389..412
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          405..425
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          433..453
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          540..>832
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          552..572
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(557,559,561,563..564,567..568,571,585,587,591..592,
                     595..596,599,613,615,617,619..620,623..624,627)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          580..600
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(580,583,596,600)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          608..628
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          636..656
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          664..684
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          720..740
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(725,727,729,731..732,735..736,739,781,783,787..788,
                     791..792,795,809,811,813,815..816,819..820,823)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          748..796
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(748,779,792,796)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          804..824
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..832
                     /gene="ZKSCAN5"
                     /coded_by="XM_061153610.1:124..2622"
                     /db_xref="GeneID:133063802"
ORIGIN      
        1 mimtgsgevi dldppsessp eqedllivkv eeedctwmqe ysppvfetfy qrfkhfqyhe
       61 asgprealsq lrvlccewlr pelhtkeqil ellvleqflt ilpeqfqtwv rehhpesgee
      121 avavveniqr eleerqqqiv acpeglppks vppgagpesf shqllpvdpq aehepqgphl
      181 leedalpalq vsslplkdsq eltasllstg sqklvkiedv advavsfile ewghldqsqk
      241 slyrddrken ygsmtsmdye srndnveltv khisdeaess wmtsggpert vpssqefgev
      301 ndlhgmverw qvhppggrsr qtppqkrelg aitdvtrkpp tggerghrcn dcgkfflqas
      361 nfiqhrriht gekpfkcgec gksynqrvhl tqhqrvhtge kpytcqvcgk afrvsshlvq
      421 hhsvhsgerp ygcpecgksf grhshliehl krhfreksqr cgsrrskntk lnvkkkisef
      481 seadmeptgr lqrnvspvqd fgeghehqgk lerkqgmsmk eilgqpsskr mnfsevtyah
      541 kkpstgerph kcnecgksfi qsahliqhqr ihtgekpfrc decgksynqr vhltqhqrvh
      601 tgekpytcpl cgkafrvrsh lvqhqsvhsg erpfkcnecg kgfgrrshla ghlrlhsrek
      661 shqchecgev ffqyvslieh qvlhmgqkne qngvceeays wnltviedkk ielqeqpykc
      721 dvcgkafhys sdliqhyrth taektykcnl cgesvgqcph inqypksyss lkahqcnecg
      781 rgfalqshln qhqrihtaek pfqckecgms fswscslfkh lrshertdpi kt
//
LOCUS       XP_061009594             831 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein with KRAB and SCAN domains 5 isoform X2 [Dama
            dama].
ACCESSION   XP_061009594
VERSION     XP_061009594.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153611.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..831
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..831
                     /product="zinc finger protein with KRAB and SCAN domains 5
                     isoform X2"
                     /calculated_mol_wt=95008
     Region          46..155
                     /region_name="SCAN"
                     /note="leucine rich region; smart00431"
                     /db_xref="CDD:128708"
     Region          221..>259
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          348..368
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(353,355,357,359..360,363..364,367,381,383,387..388,
                     391..392,395,409,411,413,415..416,419..420,423)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          360..385
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          376..396
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(376,379,392,396)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          388..411
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          404..424
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          432..452
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          539..>831
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          551..571
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(556,558,560,562..563,566..567,570,584,586,590..591,
                     594..595,598,612,614,616,618..619,622..623,626)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          579..599
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(579,582,595,599)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          607..627
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          635..655
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          663..683
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          719..739
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(724,726,728,730..731,734..735,738,780,782,786..787,
                     790..791,794,808,810,812,814..815,818..819,822)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          747..795
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(747,778,791,795)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          803..823
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..831
                     /gene="ZKSCAN5"
                     /coded_by="XM_061153611.1:603..3098"
                     /db_xref="GeneID:133063802"
ORIGIN      
        1 mimtgsgevi dldppsessp eqedllivkv eeedctwmqe ysppvfetfy qrfkhfqyhe
       61 asgprealsq lrvlccewlr pelhtkeqil ellvleqflt ilpeqfqtwv rehhpesgee
      121 avavveniqr eleerqqqiv acpeglppks vppgagpesf shqllpvdpq aehepqgphl
      181 leedalpalq vsslplkdsq eltasllstg sqlvkiedva dvavsfilee wghldqsqks
      241 lyrddrkeny gsmtsmdyes rndnveltvk hisdeaessw mtsggpertv pssqefgevn
      301 dlhgmverwq vhppggrsrq tppqkrelga itdvtrkppt ggerghrcnd cgkfflqasn
      361 fiqhrrihtg ekpfkcgecg ksynqrvhlt qhqrvhtgek pytcqvcgka frvsshlvqh
      421 hsvhsgerpy gcpecgksfg rhshliehlk rhfreksqrc gsrrskntkl nvkkkisefs
      481 eadmeptgrl qrnvspvqdf geghehqgkl erkqgmsmke ilgqpsskrm nfsevtyahk
      541 kpstgerphk cnecgksfiq sahliqhqri htgekpfrcd ecgksynqrv hltqhqrvht
      601 gekpytcplc gkafrvrshl vqhqsvhsge rpfkcnecgk gfgrrshlag hlrlhsreks
      661 hqchecgevf fqyvsliehq vlhmgqkneq ngvceeaysw nltviedkki elqeqpykcd
      721 vcgkafhyss dliqhyrtht aektykcnlc gesvgqcphi nqypksyssl kahqcnecgr
      781 gfalqshlnq hqrihtaekp fqckecgmsf swscslfkhl rshertdpik t
//
LOCUS       XP_061009595             492 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein with KRAB and SCAN domains 5 isoform X3 [Dama
            dama].
ACCESSION   XP_061009595
VERSION     XP_061009595.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153612.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..492
                     /product="zinc finger protein with KRAB and SCAN domains 5
                     isoform X3"
                     /calculated_mol_wt=56309
     Region          157..>459
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          185..205
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          213..233
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(218,220,222,224..225,228..229,232,246,248,252..253,
                     256..257,260,274,276,278,280..281,284..285,288)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          241..261
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(241,244,257,261)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          269..289
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          297..317
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          325..345
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          353..373
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          381..401
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(386,388,390,392..393,396..397,400,414,416,420..421,
                     424..425,428,442,444,446,448..449,452..453,456)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          409..429
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(409,412,425,429)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          437..457
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..492
                     /gene="ZKSCAN5"
                     /coded_by="XM_061153612.1:95..1573"
                     /db_xref="GeneID:133063802"
ORIGIN      
        1 mdyltievee navttedasl speqstegme ppgeplpvef qelttvkdee mdftcveeeq
       61 insarrymgm dmkvencgnl vfwdsestpe tkvslsmqev segisserel iierlikdds
      121 wdsgwiktwe yggmlerqqg nqkkdlrqvv ikhkrnpmed cteigessnp ikhqniysvk
      181 kpwkcsecgk sfnyysafil hqrihtgekp yvctecgkaf trsssliqhq rihtgekpye
      241 cnecgkafsh rsaliqhhii htgekpyecn ecgkafnqst yliqhhriht gekpykckec
      301 gkafndtssl ikhqrvhtge kpygckecgk afsdrsgltq hqrthtgekp yecsecgkaf
      361 sycsaliqhq gthtgekpyk checgkafsd rsalirhqri htgekpykck ecekafsqss
      421 sltkhlrtht gekpykcndc dkafsqsssl iqhqkihage kcykykkcek tfsmcsafhq
      481 hgeihdeyka vn
//
LOCUS       XP_061009596             396 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein with KRAB and SCAN domains 5 isoform X4 [Dama
            dama].
ACCESSION   XP_061009596
VERSION     XP_061009596.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153613.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..396
                     /product="zinc finger protein with KRAB and SCAN domains 5
                     isoform X4"
                     /calculated_mol_wt=45480
     Region          61..>363
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          89..109
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          117..137
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(122,124,126,128..129,132..133,136,150,152,156..157,
                     160..161,164,178,180,182,184..185,188..189,192)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          145..165
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(145,148,161,165)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          173..193
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          201..221
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          229..249
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          257..277
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          285..305
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(290,292,294,296..297,300..301,304,318,320,324..325,
                     328..329,332,346,348,350,352..353,356..357,360)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          313..333
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(313,316,329,333)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          341..361
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..396
                     /gene="ZKSCAN5"
                     /coded_by="XM_061153613.1:80..1270"
                     /db_xref="GeneID:133063802"
ORIGIN      
        1 mqevsegiss ereliierli kddswdsgwi ktweyggmle rqqgnqkkdl rqvvikhkrn
       61 pmedcteige ssnpikhqni ysvkkpwkcs ecgksfnyys afilhqriht gekpyvctec
      121 gkaftrsssl iqhqrihtge kpyecnecgk afshrsaliq hhiihtgekp yecnecgkaf
      181 nqstyliqhh rihtgekpyk ckecgkafnd tsslikhqrv htgekpygck ecgkafsdrs
      241 gltqhqrtht gekpyecsec gkafsycsal iqhqgthtge kpykchecgk afsdrsalir
      301 hqrihtgekp ykckecekaf sqsssltkhl rthtgekpyk cndcdkafsq sssliqhqki
      361 hagekcykyk kcektfsmcs afhqhgeihd eykavn
//
LOCUS       XP_061009597             359 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein with KRAB and SCAN domains 5 isoform X5 [Dama
            dama].
ACCESSION   XP_061009597
VERSION     XP_061009597.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153614.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..359
                     /product="zinc finger protein with KRAB and SCAN domains 5
                     isoform X5"
                     /calculated_mol_wt=41155
     Region          24..>326
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          52..72
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          80..100
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(85,87,89,91..92,95..96,99,113,115,119..120,123..124,
                     127,141,143,145,147..148,151..152,155)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          108..128
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(108,111,124,128)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          136..156
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          164..184
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          192..212
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          220..240
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          248..268
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(253,255,257,259..260,263..264,267,281,283,287..288,
                     291..292,295,309,311,313,315..316,319..320,323)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          276..296
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(276,279,292,296)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          304..324
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..359
                     /gene="ZKSCAN5"
                     /coded_by="XM_061153614.1:177..1256"
                     /db_xref="GeneID:133063802"
ORIGIN      
        1 mlerqqgnqk kdlrqvvikh krnpmedcte igessnpikh qniysvkkpw kcsecgksfn
       61 yysafilhqr ihtgekpyvc tecgkaftrs ssliqhqrih tgekpyecne cgkafshrsa
      121 liqhhiihtg ekpyecnecg kafnqstyli qhhrihtgek pykckecgka fndtsslikh
      181 qrvhtgekpy gckecgkafs drsgltqhqr thtgekpyec secgkafsyc saliqhqgth
      241 tgekpykche cgkafsdrsa lirhqrihtg ekpykckece kafsqssslt khlrthtgek
      301 pykcndcdka fsqsssliqh qkihagekcy kykkcektfs mcsafhqhge ihdeykavn
//
LOCUS       XP_061009599             674 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 655 isoform X1 [Dama dama].
ACCESSION   XP_061009599
VERSION     XP_061009599.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153616.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..674
                     /product="zinc finger protein 655 isoform X1"
                     /calculated_mol_wt=77795
     Region          350..>455
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          379..399
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(384,386,388,390..391,394..395,398,447,449,453..454,
                     457..458,461,475,477,479,481..482,485..486,489)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          407..462
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(407,410,458,462)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          411..427
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          468..490
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          470..490
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          497..517
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(497,500,513,517)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          545..567
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          547..567
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          574..594
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          630..650
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     CDS             1..674
                     /gene="ZNF655"
                     /coded_by="XM_061153616.1:961..2985"
                     /db_xref="GeneID:133063804"
ORIGIN      
        1 meeisaqeaa espvvqfqsl etnsdslspe prflqdtdme qgltgappvp qvsslphegs
       61 pgdqaaalmt aryqpgcvis gicdirgcgc apysrgmgmp gpcsegslqr sdvrelwepg
      121 ftgrpgfdpc irkipwrrkw qptpvllpva lvgyspwgrk esnttkqlkl shftsrrfpl
      181 fkpdgisqle qdlqvfdlet knrevlrddy sdgetreenk llipkqkipe evhsyrvrvg
      241 rfkkdiaqvp etrevykped rlerlqeilr kflflerefr qitiskktft seknsecnel
      301 eksfsldstl dtdqrvlriq nvddidkydv slnqhsagkq ehinltqdfh sndykdslme
      361 lshlsncesi ptteksykcd acekifhqss alsrhqriht rekpykckec eksfsqsssl
      421 srhkrihtre kpykceasdk sceasdkscn qssdilqhkr vhtraksykc sncervfsrs
      481 vhltqhqrvh rempckctlc gsdfchtshl aehqkvhdee kcyeynncgl tfikhqgirp
      541 rekpytcnec gkdfrlnshl iqhqrihtek phessesgka fnqtacliqh hkvhrkeksy
      601 ecndyednfs hssdlvlqqe vltrekafdc dawekslsqr ahlvhhqgih tkekpyecne
      661 rgetfnqvqa sfni
//
LOCUS       XP_061009600             674 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 655 isoform X1 [Dama dama].
ACCESSION   XP_061009600
VERSION     XP_061009600.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153617.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..674
                     /product="zinc finger protein 655 isoform X1"
                     /calculated_mol_wt=77795
     Region          350..>455
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          379..399
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(384,386,388,390..391,394..395,398,447,449,453..454,
                     457..458,461,475,477,479,481..482,485..486,489)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          407..462
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(407,410,458,462)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          411..427
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          468..490
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          470..490
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          497..517
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(497,500,513,517)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          545..567
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          547..567
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          574..594
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          630..650
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     CDS             1..674
                     /gene="ZNF655"
                     /coded_by="XM_061153617.1:854..2878"
                     /db_xref="GeneID:133063804"
ORIGIN      
        1 meeisaqeaa espvvqfqsl etnsdslspe prflqdtdme qgltgappvp qvsslphegs
       61 pgdqaaalmt aryqpgcvis gicdirgcgc apysrgmgmp gpcsegslqr sdvrelwepg
      121 ftgrpgfdpc irkipwrrkw qptpvllpva lvgyspwgrk esnttkqlkl shftsrrfpl
      181 fkpdgisqle qdlqvfdlet knrevlrddy sdgetreenk llipkqkipe evhsyrvrvg
      241 rfkkdiaqvp etrevykped rlerlqeilr kflflerefr qitiskktft seknsecnel
      301 eksfsldstl dtdqrvlriq nvddidkydv slnqhsagkq ehinltqdfh sndykdslme
      361 lshlsncesi ptteksykcd acekifhqss alsrhqriht rekpykckec eksfsqsssl
      421 srhkrihtre kpykceasdk sceasdkscn qssdilqhkr vhtraksykc sncervfsrs
      481 vhltqhqrvh rempckctlc gsdfchtshl aehqkvhdee kcyeynncgl tfikhqgirp
      541 rekpytcnec gkdfrlnshl iqhqrihtek phessesgka fnqtacliqh hkvhrkeksy
      601 ecndyednfs hssdlvlqqe vltrekafdc dawekslsqr ahlvhhqgih tkekpyecne
      661 rgetfnqvqa sfni
//
LOCUS       XP_061009601             674 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 655 isoform X1 [Dama dama].
ACCESSION   XP_061009601
VERSION     XP_061009601.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153618.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..674
                     /product="zinc finger protein 655 isoform X1"
                     /calculated_mol_wt=77795
     Region          350..>455
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          379..399
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(384,386,388,390..391,394..395,398,447,449,453..454,
                     457..458,461,475,477,479,481..482,485..486,489)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          407..462
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(407,410,458,462)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          411..427
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          468..490
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          470..490
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          497..517
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(497,500,513,517)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          545..567
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          547..567
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          574..594
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          630..650
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     CDS             1..674
                     /gene="ZNF655"
                     /coded_by="XM_061153618.1:241..2265"
                     /db_xref="GeneID:133063804"
ORIGIN      
        1 meeisaqeaa espvvqfqsl etnsdslspe prflqdtdme qgltgappvp qvsslphegs
       61 pgdqaaalmt aryqpgcvis gicdirgcgc apysrgmgmp gpcsegslqr sdvrelwepg
      121 ftgrpgfdpc irkipwrrkw qptpvllpva lvgyspwgrk esnttkqlkl shftsrrfpl
      181 fkpdgisqle qdlqvfdlet knrevlrddy sdgetreenk llipkqkipe evhsyrvrvg
      241 rfkkdiaqvp etrevykped rlerlqeilr kflflerefr qitiskktft seknsecnel
      301 eksfsldstl dtdqrvlriq nvddidkydv slnqhsagkq ehinltqdfh sndykdslme
      361 lshlsncesi ptteksykcd acekifhqss alsrhqriht rekpykckec eksfsqsssl
      421 srhkrihtre kpykceasdk sceasdkscn qssdilqhkr vhtraksykc sncervfsrs
      481 vhltqhqrvh rempckctlc gsdfchtshl aehqkvhdee kcyeynncgl tfikhqgirp
      541 rekpytcnec gkdfrlnshl iqhqrihtek phessesgka fnqtacliqh hkvhrkeksy
      601 ecndyednfs hssdlvlqqe vltrekafdc dawekslsqr ahlvhhqgih tkekpyecne
      661 rgetfnqvqa sfni
//
LOCUS       XP_061009602             674 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 655 isoform X1 [Dama dama].
ACCESSION   XP_061009602
VERSION     XP_061009602.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153619.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..674
                     /product="zinc finger protein 655 isoform X1"
                     /calculated_mol_wt=77795
     Region          350..>455
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          379..399
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(384,386,388,390..391,394..395,398,447,449,453..454,
                     457..458,461,475,477,479,481..482,485..486,489)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          407..462
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(407,410,458,462)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          411..427
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          468..490
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          470..490
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          497..517
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(497,500,513,517)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          545..567
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          547..567
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          574..594
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          630..650
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     CDS             1..674
                     /gene="ZNF655"
                     /coded_by="XM_061153619.1:119..2143"
                     /db_xref="GeneID:133063804"
ORIGIN      
        1 meeisaqeaa espvvqfqsl etnsdslspe prflqdtdme qgltgappvp qvsslphegs
       61 pgdqaaalmt aryqpgcvis gicdirgcgc apysrgmgmp gpcsegslqr sdvrelwepg
      121 ftgrpgfdpc irkipwrrkw qptpvllpva lvgyspwgrk esnttkqlkl shftsrrfpl
      181 fkpdgisqle qdlqvfdlet knrevlrddy sdgetreenk llipkqkipe evhsyrvrvg
      241 rfkkdiaqvp etrevykped rlerlqeilr kflflerefr qitiskktft seknsecnel
      301 eksfsldstl dtdqrvlriq nvddidkydv slnqhsagkq ehinltqdfh sndykdslme
      361 lshlsncesi ptteksykcd acekifhqss alsrhqriht rekpykckec eksfsqsssl
      421 srhkrihtre kpykceasdk sceasdkscn qssdilqhkr vhtraksykc sncervfsrs
      481 vhltqhqrvh rempckctlc gsdfchtshl aehqkvhdee kcyeynncgl tfikhqgirp
      541 rekpytcnec gkdfrlnshl iqhqrihtek phessesgka fnqtacliqh hkvhrkeksy
      601 ecndyednfs hssdlvlqqe vltrekafdc dawekslsqr ahlvhhqgih tkekpyecne
      661 rgetfnqvqa sfni
//
LOCUS       XP_061009603             622 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 655 isoform X2 [Dama dama].
ACCESSION   XP_061009603
VERSION     XP_061009603.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153620.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..622
                     /product="zinc finger protein 655 isoform X2"
                     /calculated_mol_wt=72195
     Region          85..139
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          298..>403
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          327..347
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(332,334,336,338..339,342..343,346,395,397,401..402,
                     405..406,409,423,425,427,429..430,433..434,437)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          355..410
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(355,358,406,410)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          359..375
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          416..438
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          418..438
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          445..465
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(445,448,461,465)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          493..515
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          495..515
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          522..542
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          578..598
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     CDS             1..622
                     /gene="ZNF655"
                     /coded_by="XM_061153620.1:961..2829"
                     /db_xref="GeneID:133063804"
ORIGIN      
        1 meeisaqeaa espvvqfqsl etnsdslspe prflqdtdme qgltgappvp qvsslphegs
       61 pgdqaaalmt aryqssqavl fqefvtfedv avhltreewg cldpvqraly revmlenygn
      121 lvslgfplfk pdgisqleqd lqvfdletkn revlrddysd getreenkll ipkqkipeev
      181 hsyrvrvgrf kkdiaqvpet revykpedrl erlqeilrkf lflerefrqi tiskktftse
      241 knsecnelek sfsldstldt dqrvlriqnv ddidkydvsl nqhsagkqeh inltqdfhsn
      301 dykdslmels hlsncesipt teksykcdac ekifhqssal srhqrihtre kpykckecek
      361 sfsqssslsr hkrihtrekp ykceasdksc easdkscnqs sdilqhkrvh traksykcsn
      421 cervfsrsvh ltqhqrvhre mpckctlcgs dfchtshlae hqkvhdeekc yeynncgltf
      481 ikhqgirpre kpytcnecgk dfrlnshliq hqrihtekph essesgkafn qtacliqhhk
      541 vhrkeksyec ndyednfshs sdlvlqqevl trekafdcda wekslsqrah lvhhqgihtk
      601 ekpyecnerg etfnqvqasf ni
//
LOCUS       XP_061009604             614 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 655 isoform X3 [Dama dama].
ACCESSION   XP_061009604
VERSION     XP_061009604.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153621.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..614
                     /product="zinc finger protein 655 isoform X3"
                     /calculated_mol_wt=71334
     Region          77..131
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          290..>395
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          319..339
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(324,326,328,330..331,334..335,338,387,389,393..394,
                     397..398,401,415,417,419,421..422,425..426,429)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          347..402
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(347,350,398,402)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          351..367
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          408..430
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          410..430
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          437..457
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(437,440,453,457)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          485..507
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          487..507
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          514..534
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          570..590
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..614
                     /gene="ZNF655"
                     /coded_by="XM_061153621.1:961..2805"
                     /db_xref="GeneID:133063804"
ORIGIN      
        1 meeisaqeaa espvvqfqsl etnsdslspe prflqdtdme qgltgappvp qvsslphegs
       61 pgdqaaalmt aryqefvtfe dvavhltree wgcldpvqra lyrevmleny gnlvslgfpl
      121 fkpdgisqle qdlqvfdlet knrevlrddy sdgetreenk llipkqkipe evhsyrvrvg
      181 rfkkdiaqvp etrevykped rlerlqeilr kflflerefr qitiskktft seknsecnel
      241 eksfsldstl dtdqrvlriq nvddidkydv slnqhsagkq ehinltqdfh sndykdslme
      301 lshlsncesi ptteksykcd acekifhqss alsrhqriht rekpykckec eksfsqsssl
      361 srhkrihtre kpykceasdk sceasdkscn qssdilqhkr vhtraksykc sncervfsrs
      421 vhltqhqrvh rempckctlc gsdfchtshl aehqkvhdee kcyeynncgl tfikhqgirp
      481 rekpytcnec gkdfrlnshl iqhqrihtek phessesgka fnqtacliqh hkvhrkeksy
      541 ecndyednfs hssdlvlqqe vltrekafdc dawekslsqr ahlvhhqgih tkekpyecne
      601 rgetfnqvqa sfni
//
LOCUS       XP_061009605             543 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 655 isoform X4 [Dama dama].
ACCESSION   XP_061009605
VERSION     XP_061009605.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153622.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..543
                     /product="zinc finger protein 655 isoform X4"
                     /calculated_mol_wt=63451
     Region          219..>324
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          248..268
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(253,255,257,259..260,263..264,267,316,318,322..323,
                     326..327,330,344,346,348,350..351,354..355,358)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          276..331
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(276,279,327,331)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          280..296
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          337..359
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          339..359
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          366..386
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(366,369,382,386)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          414..436
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          416..436
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          443..463
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(443,446,459,463)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          499..519
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..543
                     /gene="ZNF655"
                     /coded_by="XM_061153622.1:961..2592"
                     /db_xref="GeneID:133063804"
ORIGIN      
        1 meeisaqeaa espvvqfqsl etnsdslspe prflqdtdme qgltggfplf kpdgisqleq
       61 dlqvfdletk nrevlrddys dgetreenkl lipkqkipee vhsyrvrvgr fkkdiaqvpe
      121 trevykpedr lerlqeilrk flflerefrq itiskktfts eknsecnele ksfsldstld
      181 tdqrvlriqn vddidkydvs lnqhsagkqe hinltqdfhs ndykdslmel shlsncesip
      241 tteksykcda cekifhqssa lsrhqrihtr ekpykckece ksfsqsssls rhkrihtrek
      301 pykceasdks ceasdkscnq ssdilqhkrv htraksykcs ncervfsrsv hltqhqrvhr
      361 empckctlcg sdfchtshla ehqkvhdeek cyeynncglt fikhqgirpr ekpytcnecg
      421 kdfrlnshli qhqrihtekp hessesgkaf nqtacliqhh kvhrkeksye cndyednfsh
      481 ssdlvlqqev ltrekafdcd awekslsqra hlvhhqgiht kekpyecner getfnqvqas
      541 fni
//
LOCUS       XP_061009606             509 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 655 isoform X5 [Dama dama].
ACCESSION   XP_061009606
VERSION     XP_061009606.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153623.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..509
                     /product="zinc finger protein 655 isoform X5"
                     /calculated_mol_wt=59760
     Region          <1..26
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          185..>290
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          214..234
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(219,221,223,225..226,229..230,233,282,284,288..289,
                     292..293,296,310,312,314,316..317,320..321,324)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          242..297
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(242,245,293,297)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          246..262
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          303..325
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          305..325
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          332..352
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(332,335,348,352)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          382..402
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          409..429
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(409,412,425,429)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          465..485
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..509
                     /gene="ZNF655"
                     /coded_by="XM_061153623.1:195..1724"
                     /db_xref="GeneID:133063804"
ORIGIN      
        1 mlenygnlvs lgfplfkpdg isqleqdlqv fdletknrev lrddysdget reenkllipk
       61 qkipeevhsy rvrvgrfkkd iaqvpetrev ykpedrlerl qeilrkflfl erefrqitis
      121 kktftsekns ecneleksfs ldstldtdqr vlriqnvddi dkydvslnqh sagkqehinl
      181 tqdfhsndyk dslmelshls ncesipttek sykcdaceki fhqssalsrh qrihtrekpy
      241 kckeceksfs qssslsrhkr ihtrekpykc easdksceas dkscnqssdi lqhkrvhtra
      301 ksykcsncer vfsrsvhltq hqrvhrempc kctlcgsdfc htshlaehqk vhdeekcyey
      361 nncgltfikh qgirprekpy tcnecgkdfr lnshliqhqr ihtekphess esgkafnqta
      421 cliqhhkvhr keksyecndy ednfshssdl vlqqevltre kafdcdawek slsqrahlvh
      481 hqgihtkekp yecnergetf nqvqasfni
//
LOCUS       XP_061009607             189 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 655 isoform X6 [Dama dama].
ACCESSION   XP_061009607
VERSION     XP_061009607.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153624.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..189
                     /product="zinc finger protein 655 isoform X6"
                     /calculated_mol_wt=20675
     Region          85..>131
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     CDS             1..189
                     /gene="ZNF655"
                     /coded_by="XM_061153624.1:961..1530"
                     /db_xref="GeneID:133063804"
ORIGIN      
        1 meeisaqeaa espvvqfqsl etnsdslspe prflqdtdme qgltgappvp qvsslphegs
       61 pgdqaaalmt aryqssqavl fqefvtfedv avhltreewg cldpvqraly revmlenygn
      121 lvslgillrl pttrihsvns cpalshtras afsgetlail sagisrrwpr crlpidsarp
      181 rsetpfpql
//
LOCUS       XP_061009608             181 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 655 isoform X7 [Dama dama].
ACCESSION   XP_061009608
VERSION     XP_061009608.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153625.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..181
                     /product="zinc finger protein 655 isoform X7"
                     /calculated_mol_wt=19814
     Region          77..>123
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     CDS             1..181
                     /gene="ZNF655"
                     /coded_by="XM_061153625.1:961..1506"
                     /db_xref="GeneID:133063804"
ORIGIN      
        1 meeisaqeaa espvvqfqsl etnsdslspe prflqdtdme qgltgappvp qvsslphegs
       61 pgdqaaalmt aryqefvtfe dvavhltree wgcldpvqra lyrevmleny gnlvslgill
      121 rlpttrihsv nscpalshtr asafsgetla ilsagisrrw prcrlpidsa rprsetpfpq
      181 l
//
LOCUS       XP_061009609             546 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger and SCAN domain-containing protein 25 isoform X1 [Dama
            dama].
ACCESSION   XP_061009609
VERSION     XP_061009609.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153626.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..546
                     /product="zinc finger and SCAN domain-containing protein
                     25 isoform X1"
                     /calculated_mol_wt=61730
     Region          38..123
                     /region_name="SCAN"
                     /note="SCAN domain; pfam02023"
                     /db_xref="CDD:460417"
     Region          231..>259
                     /region_name="KRAB_A-box"
                     /note="KRAB (Kruppel-associated box) domain -A box;
                     cd07765"
                     /db_xref="CDD:143639"
     Region          <317..506
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          351..371
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          379..399
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(379,382,395,399)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          407..427
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(412,414,416,418..419,422..423,426,440,442,446..447,
                     450..451,454,467,469,471,473..474,477..478,481)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          435..455
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(435,438,451,455)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          463..482
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          490..510
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          502..527
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          518..537
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..546
                     /gene="ZSCAN25"
                     /coded_by="XM_061153626.1:346..1986"
                     /db_xref="GeneID:133063806"
ORIGIN      
        1 mlierpgmae epqqqmggpv vklekelpwg rtredpspet frlrfrqfry qeaagpqeal
       61 relqelcrqw lrpelhtkeq ilellvleqf ltilprefya wiwehgpesg kalvamvedf
      121 tqraleakav pchvqgqree talcrdpwep svhlgpvevk pewgmphgeg fqgldrgaee
      181 qlsqdpgegt qafqeqalpv lqagaglpav strdqevaas fltagsqglg pfkdmalafp
      241 eeewrhvtpa qidcfgeyve pqdcgvspqg lgskdkeakt qladpkgqla cgpaercgep
      301 alqgpelgrp ceqearsplg napgplppqh sitplpddlq thssfwkpfq cpecgkgfsr
      361 ssnlvrhqrt heeeksyscg ecgkgfalre yllkhqrthl grrphvcgec wktfsqrhhl
      421 avhqrshtge kpfqcadcwr sfsrrqhlqv hrrthtgekp ytcecgkrfs rnanlavhrr
      481 thtgekpygc qvcgkrfskg erlvrhqrih tgekpyccpa cgrsfnqrsi lnrhqktqhr
      541 qeppgq
//
LOCUS       XP_061009610             350 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger and SCAN domain-containing protein 25 isoform X2 [Dama
            dama].
ACCESSION   XP_061009610
VERSION     XP_061009610.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153627.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..350
                     /product="zinc finger and SCAN domain-containing protein
                     25 isoform X2"
                     /calculated_mol_wt=38684
     Region          38..123
                     /region_name="SCAN"
                     /note="SCAN domain; pfam02023"
                     /db_xref="CDD:460417"
     CDS             1..350
                     /gene="ZSCAN25"
                     /coded_by="XM_061153627.1:346..1398"
                     /db_xref="GeneID:133063806"
ORIGIN      
        1 mlierpgmae epqqqmggpv vklekelpwg rtredpspet frlrfrqfry qeaagpqeal
       61 relqelcrqw lrpelhtkeq ilellvleqf ltilprefya wiwehgpesg kalvamvedf
      121 tqraleakav pchvqgqree talcrdpwep svhlgpvevk pewgmphgeg fqgldrgaee
      181 qlsqdpgegt qafqeqalpv lqagaglpav strdqevaas fltagsqawg artrrqrpsw
      241 qtprgsslvg rqsgvgspls rarswedhan rrpgarwetr lgrsrpstas prclmtsrpt
      301 apsgslssal svgrasvgap twsdtsgrtr rrsrtaagsa aralrcastc
//
LOCUS       XP_061009611             532 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 394 isoform X1 [Dama dama].
ACCESSION   XP_061009611
VERSION     XP_061009611.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153628.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..532
                     /product="zinc finger protein 394 isoform X1"
                     /calculated_mol_wt=60732
     Region          45..155
                     /region_name="SCAN"
                     /note="leucine rich region; smart00431"
                     /db_xref="CDD:128708"
     Region          140..199
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          <300..493
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          338..358
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(343,345,347,349..350,353..354,357,371,373,377..378,
                     381..382,385,399,401,403,405..406,409..410,413)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          366..386
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(366,369,382,386)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          394..414
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          422..441
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          449..469
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(454,456,458,460..461,464..465,468,482,484,488..489,
                     492..493,496,510,512,514,516..517,520..521,524)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          477..497
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(477,480,493,497)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          490..514
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          505..525
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..532
                     /gene="ZNF394"
                     /coded_by="XM_061153628.1:174..1772"
                     /db_xref="GeneID:133063807"
ORIGIN      
        1 mswswtasqs rgaplalgdg lrtvkveeds pgsgdshrpg dcpdretsrc hfrqfryqev
       61 agpeealsrl relccrwlrp evhskeqile llvleqflti lpqklqawvr khcpqsgdea
      121 atlvrslqre pagtsrqglv tvqdvavspt weewerlgpa qkhffresap kdhgnsvsps
      181 setrieskel ipkqeileev eppgqlqgfq ekaplssecg dtqqdrgekp lgdpsslkcd
      241 dspadqgvth isdlrngpre edvknnefrt saessdfvpg qyiptagrpv tadeygnncq
      301 hrldmvkphe sldseenrhh sglfetqkwf hkerpytcdt ceksfkqrsd llkhhrihtg
      361 erpygcpvcg rrfsqsatlv khqrthtgek pytcpkcgds frqsshlsrh qrthlrekrc
      421 tckecgetcr tsgrfrhqrt hegerpytce ecnksfkrcs dlskhqkiht gerpygcsvc
      481 grrfsqsatl vkhqrthtge kpyrclvcgd sfrqsshlvr hqrihrnkvp sf
//
LOCUS       XP_061009612             414 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 394 isoform X2 [Dama dama].
ACCESSION   XP_061009612
VERSION     XP_061009612.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153629.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..414
                     /product="zinc finger protein 394 isoform X2"
                     /calculated_mol_wt=46453
     Region          <182..375
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          220..240
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(225,227,229,231..232,235..236,239,253,255,259..260,
                     263..264,267,281,283,285,287..288,291..292,295)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          248..268
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(248,251,264,268)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          276..296
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          304..323
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          331..351
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(336,338,340,342..343,346..347,350,364,366,370..371,
                     374..375,378,392,394,396,398..399,402..403,406)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          359..379
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(359,362,375,379)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          372..396
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          387..407
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..414
                     /gene="ZNF394"
                     /coded_by="XM_061153629.1:616..1860"
                     /db_xref="GeneID:133063807"
ORIGIN      
        1 maeargalkr adpgtagaga vpdhpaseap glgaealpae rgrgghlgav sseracwdlt
       61 pgsetriesk elipkqeile eveppgqlqg fqekaplsse cgdtqqdrge kplgdpsslk
      121 cddspadqgv thisdlrngp reedvknnef rtsaessdfv pgqyiptagr pvtadeygnn
      181 cqhrldmvkp hesldseenr hhsglfetqk wfhkerpytc dtceksfkqr sdllkhhrih
      241 tgerpygcpv cgrrfsqsat lvkhqrthtg ekpytcpkcg dsfrqsshls rhqrthlrek
      301 rctckecget crtsgrfrhq rthegerpyt ceecnksfkr csdlskhqki htgerpygcs
      361 vcgrrfsqsa tlvkhqrtht gekpyrclvc gdsfrqsshl vrhqrihrnk vpsf
//
LOCUS       XP_061009613             414 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 394 isoform X2 [Dama dama].
ACCESSION   XP_061009613
VERSION     XP_061009613.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153630.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..414
                     /product="zinc finger protein 394 isoform X2"
                     /calculated_mol_wt=46453
     Region          <182..375
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          220..240
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(225,227,229,231..232,235..236,239,253,255,259..260,
                     263..264,267,281,283,285,287..288,291..292,295)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          248..268
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(248,251,264,268)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          276..296
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          304..323
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          331..351
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(336,338,340,342..343,346..347,350,364,366,370..371,
                     374..375,378,392,394,396,398..399,402..403,406)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          359..379
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(359,362,375,379)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          372..396
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          387..407
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..414
                     /gene="ZNF394"
                     /coded_by="XM_061153630.1:128..1372"
                     /db_xref="GeneID:133063807"
ORIGIN      
        1 maeargalkr adpgtagaga vpdhpaseap glgaealpae rgrgghlgav sseracwdlt
       61 pgsetriesk elipkqeile eveppgqlqg fqekaplsse cgdtqqdrge kplgdpsslk
      121 cddspadqgv thisdlrngp reedvknnef rtsaessdfv pgqyiptagr pvtadeygnn
      181 cqhrldmvkp hesldseenr hhsglfetqk wfhkerpytc dtceksfkqr sdllkhhrih
      241 tgerpygcpv cgrrfsqsat lvkhqrthtg ekpytcpkcg dsfrqsshls rhqrthlrek
      301 rctckecget crtsgrfrhq rthegerpyt ceecnksfkr csdlskhqki htgerpygcs
      361 vcgrrfsqsa tlvkhqrtht gekpyrclvc gdsfrqsshl vrhqrihrnk vpsf
//
LOCUS       XP_061009614             447 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 3 isoform X1 [Dama dama].
ACCESSION   XP_061009614
VERSION     XP_061009614.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153631.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..447
                     /product="zinc finger protein 3 isoform X1"
                     /calculated_mol_wt=50430
     Region          52..>100
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          <165..415
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          175..195
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          203..223
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(208,210,212,214..215,218..219,222,236,238,242..243,
                     246..247,250,264,266,268,270..271,274..275,278)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          231..251
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(231,234,247,251)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          259..279
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          287..307
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(292,294,296,298..299,302..303,306,320,322,326..327,
                     330..331,334,348,350,352,354..355,358..359,362)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          315..335
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(315,318,331,335)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          343..363
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          371..391
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          399..419
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..447
                     /gene="ZNF3"
                     /coded_by="XM_061153631.1:219..1562"
                     /db_xref="GeneID:133063808"
ORIGIN      
        1 metqadrvsq epqallesal psskgpefpd kdslgdemla aallkakaqe lvtfedvavy
       61 firkewkrle paqrdlyrdv mlenygnvfs ldgetrtepd seisedtgsh gvllgrfqkd
      121 isqglkfeea yeqevslkrq lgsssgerln rkmqdfgqvt aeekraptgg rsekcsdlrn
      181 sftvssnlis hqrlpvgdrp hkcdecsksf nrtsdliqhq rihtgekpye csecgkafsq
      241 sshliqhqri htgekpyecn dcgktfscss alilhrriht gekpyecnec gkafswsstl
      301 thhqrihtge kpyacnecgk afsrsstlih hqrihtgekp yecsecgkaf sqsshlyqhq
      361 rihtgekpye cmecggkfty ssgliqhqri htgenpyecs ecgkafryss alvrhqriht
      421 gekplnvmgv sksslqvtae vrirest
//
LOCUS       XP_061009616             447 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 3 isoform X1 [Dama dama].
ACCESSION   XP_061009616
VERSION     XP_061009616.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153633.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..447
                     /product="zinc finger protein 3 isoform X1"
                     /calculated_mol_wt=50430
     Region          52..>100
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          <165..415
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          175..195
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          203..223
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(208,210,212,214..215,218..219,222,236,238,242..243,
                     246..247,250,264,266,268,270..271,274..275,278)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          231..251
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(231,234,247,251)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          259..279
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          287..307
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(292,294,296,298..299,302..303,306,320,322,326..327,
                     330..331,334,348,350,352,354..355,358..359,362)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          315..335
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(315,318,331,335)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          343..363
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          371..391
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          399..419
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..447
                     /gene="ZNF3"
                     /coded_by="XM_061153633.1:335..1678"
                     /db_xref="GeneID:133063808"
ORIGIN      
        1 metqadrvsq epqallesal psskgpefpd kdslgdemla aallkakaqe lvtfedvavy
       61 firkewkrle paqrdlyrdv mlenygnvfs ldgetrtepd seisedtgsh gvllgrfqkd
      121 isqglkfeea yeqevslkrq lgsssgerln rkmqdfgqvt aeekraptgg rsekcsdlrn
      181 sftvssnlis hqrlpvgdrp hkcdecsksf nrtsdliqhq rihtgekpye csecgkafsq
      241 sshliqhqri htgekpyecn dcgktfscss alilhrriht gekpyecnec gkafswsstl
      301 thhqrihtge kpyacnecgk afsrsstlih hqrihtgekp yecsecgkaf sqsshlyqhq
      361 rihtgekpye cmecggkfty ssgliqhqri htgenpyecs ecgkafryss alvrhqriht
      421 gekplnvmgv sksslqvtae vrirest
//
LOCUS       XP_061009617             447 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 3 isoform X1 [Dama dama].
ACCESSION   XP_061009617
VERSION     XP_061009617.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153634.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..447
                     /product="zinc finger protein 3 isoform X1"
                     /calculated_mol_wt=50430
     Region          52..>100
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          <165..415
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          175..195
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          203..223
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(208,210,212,214..215,218..219,222,236,238,242..243,
                     246..247,250,264,266,268,270..271,274..275,278)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          231..251
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(231,234,247,251)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          259..279
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          287..307
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(292,294,296,298..299,302..303,306,320,322,326..327,
                     330..331,334,348,350,352,354..355,358..359,362)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          315..335
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(315,318,331,335)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          343..363
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          371..391
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          399..419
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..447
                     /gene="ZNF3"
                     /coded_by="XM_061153634.1:809..2152"
                     /db_xref="GeneID:133063808"
ORIGIN      
        1 metqadrvsq epqallesal psskgpefpd kdslgdemla aallkakaqe lvtfedvavy
       61 firkewkrle paqrdlyrdv mlenygnvfs ldgetrtepd seisedtgsh gvllgrfqkd
      121 isqglkfeea yeqevslkrq lgsssgerln rkmqdfgqvt aeekraptgg rsekcsdlrn
      181 sftvssnlis hqrlpvgdrp hkcdecsksf nrtsdliqhq rihtgekpye csecgkafsq
      241 sshliqhqri htgekpyecn dcgktfscss alilhrriht gekpyecnec gkafswsstl
      301 thhqrihtge kpyacnecgk afsrsstlih hqrihtgekp yecsecgkaf sqsshlyqhq
      361 rihtgekpye cmecggkfty ssgliqhqri htgenpyecs ecgkafryss alvrhqriht
      421 gekplnvmgv sksslqvtae vrirest
//
LOCUS       XP_061009618             295 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 3 isoform X2 [Dama dama].
ACCESSION   XP_061009618
VERSION     XP_061009618.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153635.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..295
                     /product="zinc finger protein 3 isoform X2"
                     /calculated_mol_wt=33290
     Region          <13..263
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          23..43
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          51..71
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(56,58,60,62..63,66..67,70,84,86,90..91,94..95,98,
                     112,114,116,118..119,122..123,126)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          79..99
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(79,82,95,99)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          107..127
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          135..155
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(140,142,144,146..147,150..151,154,168,170,174..175,
                     178..179,182,196,198,200,202..203,206..207,210)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          163..183
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(163,166,179,183)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          191..211
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          219..239
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          247..267
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..295
                     /gene="ZNF3"
                     /coded_by="XM_061153635.1:1021..1908"
                     /db_xref="GeneID:133063808"
ORIGIN      
        1 mqdfgqvtae ekraptggrs ekcsdlrnsf tvssnlishq rlpvgdrphk cdecsksfnr
       61 tsdliqhqri htgekpyecs ecgkafsqss hliqhqriht gekpyecndc gktfscssal
      121 ilhrrihtge kpyecnecgk afswsstlth hqrihtgekp yacnecgkaf srsstlihhq
      181 rihtgekpye csecgkafsq sshlyqhqri htgekpyecm ecggkftyss gliqhqriht
      241 genpyecsec gkafryssal vrhqrihtge kplnvmgvsk sslqvtaevr irest
//
LOCUS       XP_061009619             518 aa            linear   MAM 02-DEC-2023
DEFINITION  cytochrome P450 3A24 isoform X1 [Dama dama].
ACCESSION   XP_061009619
VERSION     XP_061009619.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153636.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..518
                     /product="cytochrome P450 3A24 isoform X1"
                     /calculated_mol_wt=59315
     Region          82..507
                     /region_name="CYP3A"
                     /note="cytochrome P450 family 3, subfamily A; cd20650"
                     /db_xref="CDD:410743"
     Site            order(91,120..123,134..135,225,227..228,230,235,256,316,
                     319..320,324,385..387,389,496..497)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410743"
     Site            order(120,133..134,141,145,152,317,320..321,324,385,388,
                     390,449..452,455..459,463)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410743"
     CDS             1..518
                     /gene="LOC133063810"
                     /coded_by="XM_061153636.1:29..1585"
                     /db_xref="GeneID:133063810"
ORIGIN      
        1 mkqtstrerl lrkkymgvwr resepiartm srfpatptry gtfshglfkk lgvpgprplp
       61 yfgnilsyrk gvcefdeecf kkygkmwgif egkhpllvit dpdviktvlv kecysvftnr
      121 rvfgplgimk navsmaedeq wkrirtllsp tftsgklkem fpiirqygdv lvrnlrkeae
      181 kgtsvdikdv fgaysmdvit stsfgvnids lgnpqdpfvd nakkllrfdi ldpfllsvvl
      241 fpflvpifev lnitifpksa vnfltksvkr ikesrlkdnq kprvdllqlm insqnsketd
      301 nhkalsdqel maqsiififa gyettsntls fllyilathp dvqqklqeei dmtfpnkapp
      361 tydvlaqmey ldmvvnetlr mfpiavrler fckkdveihg vsipkgttat vpifvlhrdp
      421 qlwpepeefr perfskknkd sinpyvylpf gtgprncigm rfaimnmkla vvrvlqnfsf
      481 kpcketqipl kinsqgiirp ekpivlkvvl rdetisga
//
LOCUS       XP_061009621             503 aa            linear   MAM 02-DEC-2023
DEFINITION  cytochrome P450 3A24 isoform X2 [Dama dama].
ACCESSION   XP_061009621
VERSION     XP_061009621.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153638.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..503
                     /product="cytochrome P450 3A24 isoform X2"
                     /calculated_mol_wt=57317
     Region          67..492
                     /region_name="CYP3A"
                     /note="cytochrome P450 family 3, subfamily A; cd20650"
                     /db_xref="CDD:410743"
     Site            order(76,105..108,119..120,210,212..213,215,220,241,301,
                     304..305,309,370..372,374,481..482)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410743"
     Site            order(105,118..119,126,130,137,302,305..306,309,370,373,
                     375,434..437,440..444,448)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410743"
     CDS             1..503
                     /gene="LOC133063810"
                     /coded_by="XM_061153638.1:257..1768"
                     /db_xref="GeneID:133063810"
ORIGIN      
        1 melipsfsme twvllatslv llyvygtfsh glfkklgvpg prplpyfgni lsyrkgvcef
       61 deecfkkygk mwgifegkhp llvitdpdvi ktvlvkecys vftnrrvfgp lgimknavsm
      121 aedeqwkrir tllsptftsg klkemfpiir qygdvlvrnl rkeaekgtsv dikdvfgays
      181 mdvitstsfg vnidslgnpq dpfvdnakkl lrfdildpfl lsvvlfpflv pifevlniti
      241 fpksavnflt ksvkrikesr lkdnqkprvd llqlminsqn sketdnhkal sdqelmaqsi
      301 ififagyett sntlsfllyi lathpdvqqk lqeeidmtfp nkapptydvl aqmeyldmvv
      361 netlrmfpia vrlerfckkd veihgvsipk gttatvpifv lhrdpqlwpe peefrperfs
      421 kknkdsinpy vylpfgtgpr ncigmrfaim nmklavvrvl qnfsfkpcke tqiplkinsq
      481 giirpekpiv lkvvlrdeti sga
//
LOCUS       XP_061009622             433 aa            linear   MAM 02-DEC-2023
DEFINITION  cytochrome P450 3A24 isoform X3 [Dama dama].
ACCESSION   XP_061009622
VERSION     XP_061009622.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153639.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..433
                     /product="cytochrome P450 3A24 isoform X3"
                     /calculated_mol_wt=49322
     Region          1..422
                     /region_name="CYP3A"
                     /note="cytochrome P450 family 3, subfamily A; cd20650"
                     /db_xref="CDD:410743"
     Site            order(6,35..38,49..50,140,142..143,145,150,171,231,
                     234..235,239,300..302,304,411..412)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410743"
     Site            order(35,48..49,56,60,67,232,235..236,239,300,303,305,
                     364..367,370..374,378)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410743"
     CDS             1..433
                     /gene="LOC133063810"
                     /coded_by="XM_061153639.1:210..1511"
                     /db_xref="GeneID:133063810"
ORIGIN      
        1 mwgifegkhp llvitdpdvi ktvlvkecys vftnrrvfgp lgimknavsm aedeqwkrir
       61 tllsptftsg klkemfpiir qygdvlvrnl rkeaekgtsv dikdvfgays mdvitstsfg
      121 vnidslgnpq dpfvdnakkl lrfdildpfl lsvvlfpflv pifevlniti fpksavnflt
      181 ksvkrikesr lkdnqkprvd llqlminsqn sketdnhkal sdqelmaqsi ififagyett
      241 sntlsfllyi lathpdvqqk lqeeidmtfp nkapptydvl aqmeyldmvv netlrmfpia
      301 vrlerfckkd veihgvsipk gttatvpifv lhrdpqlwpe peefrperfs kknkdsinpy
      361 vylpfgtgpr ncigmrfaim nmklavvrvl qnfsfkpcke tqiplkinsq giirpekpiv
      421 lkvvlrdeti sga
//
LOCUS       XP_061009623             503 aa            linear   MAM 02-DEC-2023
DEFINITION  cytochrome P450 3A24-like isoform X1 [Dama dama].
ACCESSION   XP_061009623
VERSION     XP_061009623.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153640.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..503
                     /product="cytochrome P450 3A24-like isoform X1"
                     /calculated_mol_wt=57101
     Region          67..492
                     /region_name="CYP3A"
                     /note="cytochrome P450 family 3, subfamily A; cd20650"
                     /db_xref="CDD:410743"
     Site            order(76,105..108,119..120,210,212..213,215,220,241,301,
                     304..305,309,370..372,374,481..482)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410743"
     Site            order(105,118..119,126,130,137,302,305..306,309,370,373,
                     375,434..437,440..444,448)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410743"
     CDS             1..503
                     /gene="LOC133063811"
                     /coded_by="XM_061153640.1:109..1620"
                     /db_xref="GeneID:133063811"
ORIGIN      
        1 melipsfsme twvllatglv llyvygtysy gffkklgvpg prplpyfgnv lsyrkgicef
       61 deecfkkygk iwgifegkqp vlvitdpdvi ktvlvkecys vftnrrvfgp lgimknavsv
      121 aedeqwkrir tllsptftsg klkemfpiir qygdvlvrnl skeaekgmav diknvfgays
      181 mdvitstsfg vnidslgnpq dpfvenvqkl lrfsilnpfl lsivlfpfli pilevlniti
      241 fpksvvnfft ksikrikesr lkdnqkprvd flqlminsqn fketdnhkal sdqellaqsi
      301 ififagyett sstlsfllyi lathpdvqqk lqeeidatfp nkapptydvl aqmeyldmvv
      361 neilrmfpia vridrfckkd veihgvsipk gttvavpisv lhrdpqlwpe peefrperfs
      421 kknkdsinpy iylpfgagpr ncigmrfaim nmklavvrvl qnfsfkpcke tqiplkitsq
      481 gllrpekpvv lkvvsrdgti sga
//
LOCUS       XP_061009624             486 aa            linear   MAM 02-DEC-2023
DEFINITION  cytochrome P450 3A24-like isoform X2 [Dama dama].
ACCESSION   XP_061009624
VERSION     XP_061009624.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153641.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..486
                     /product="cytochrome P450 3A24-like isoform X2"
                     /calculated_mol_wt=55308
     Region          50..475
                     /region_name="CYP3A"
                     /note="cytochrome P450 family 3, subfamily A; cd20650"
                     /db_xref="CDD:410743"
     Site            order(59,88..91,102..103,193,195..196,198,203,224,284,
                     287..288,292,353..355,357,464..465)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410743"
     Site            order(88,101..102,109,113,120,285,288..289,292,353,356,
                     358,417..420,423..427,431)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410743"
     CDS             1..486
                     /gene="LOC133063811"
                     /coded_by="XM_061153641.1:332..1792"
                     /db_xref="GeneID:133063811"
ORIGIN      
        1 mgkqwkrygt ysygffkklg vpgprplpyf gnvlsyrkgi cefdeecfkk ygkiwgifeg
       61 kqpvlvitdp dviktvlvke cysvftnrrv fgplgimkna vsvaedeqwk rirtllsptf
      121 tsgklkemfp iirqygdvlv rnlskeaekg mavdiknvfg aysmdvitst sfgvnidslg
      181 npqdpfvenv qkllrfsiln pfllsivlfp flipilevln itifpksvvn fftksikrik
      241 esrlkdnqkp rvdflqlmin sqnfketdnh kalsdqella qsiififagy ettsstlsfl
      301 lyilathpdv qqklqeeida tfpnkappty dvlaqmeyld mvvneilrmf piavridrfc
      361 kkdveihgvs ipkgttvavp isvlhrdpql wpepeefrpe rfskknkdsi npyiylpfga
      421 gprncigmrf aimnmklavv rvlqnfsfkp cketqiplki tsqgllrpek pvvlkvvsrd
      481 gtisga
//
LOCUS       XP_061009625             482 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 789 isoform X1 [Dama dama].
ACCESSION   XP_061009625
VERSION     XP_061009625.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153642.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..482
                     /product="zinc finger protein 789 isoform X1"
                     /calculated_mol_wt=56327
     Region          68..128
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          205..224
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          233..252
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <234..476
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          260..280
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          288..308
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          316..336
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(321,323,325,327..328,331..332,335,349,351,355..356,
                     359..360,363,377,379,381,383..384,387..388,391)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          344..364
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(344,347,360,364)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          372..392
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          400..420
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(405,407,409,411..412,415..416,419,433,435,439..440,
                     443..444,447,461,463,465,467..468,471..472,475)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          428..448
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(428,431,444,448)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          456..476
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..482
                     /gene="ZNF789"
                     /coded_by="XM_061153642.1:112..1560"
                     /db_xref="GeneID:133063812"
ORIGIN      
        1 meegdtcygq vhtchpspdw gpvaelllvw vpgrsyrlql slmariqphl gdqaleamfl
       61 pvswkgllsf edvalyftre ewdtldwaqk alyrdvmldn yrhivslgfq fpkpevicql
      121 eqweepwile vpragtrkas gsacpdlear fqmkelapke nasedlmlwk mssvkqktak
      181 eppeelheyn efvdiygfsl patgdecckd flqslnlihs wraqtrtqqg kydecrkpyh
      241 qrsrllrhkr tltntksyec hecgrafqrq anlvrhqrlh ssenpfecdi cgqafkqkst
      301 lidhkqchsq kkpykchdcg kcfrqmaylv ehkrihtkek pykcskcert fsqnstlirh
      361 qlihsgekph kcticgkafg rhstlmshqq ihskqnahkc secgesfgrn vdliqhqrih
      421 tkeeffecre cgktfsfkan lhrhevihtg erpyrcdkcg ksfswrtsfi khqgthrerv
      481 sa
//
LOCUS       XP_061009626             440 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 789 isoform X2 [Dama dama].
ACCESSION   XP_061009626
VERSION     XP_061009626.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153643.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..440
                     /product="zinc finger protein 789 isoform X2"
                     /calculated_mol_wt=51604
     Region          26..86
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          163..182
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          191..210
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <215..434
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          218..238
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          246..266
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          274..294
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(279,281,283,285..286,289..290,293,307,309,313..314,
                     317..318,321,335,337,339,341..342,345..346,349)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          302..322
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(302,305,318,322)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          330..350
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          358..378
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(363,365,367,369..370,373..374,377,391,393,397..398,
                     401..402,405,419,421,423,425..426,429..430,433)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          386..406
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(386,389,402,406)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          414..434
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..440
                     /gene="ZNF789"
                     /coded_by="XM_061153643.1:163..1485"
                     /db_xref="GeneID:133063812"
ORIGIN      
        1 mariqphlgd qaleamflpv swkgllsfed valyftreew dtldwaqkal yrdvmldnyr
       61 hivslgfqfp kpevicqleq weepwilevp ragtrkasgs acpdlearfq mkelapkena
      121 sedlmlwkms svkqktakep peelheynef vdiygfslpa tgdecckdfl qslnlihswr
      181 aqtrtqqgky decrkpyhqr srllrhkrtl tntksyeche cgrafqrqan lvrhqrlhss
      241 enpfecdicg qafkqkstli dhkqchsqkk pykchdcgkc frqmaylveh krihtkekpy
      301 kcskcertfs qnstlirhql ihsgekphkc ticgkafgrh stlmshqqih skqnahkcse
      361 cgesfgrnvd liqhqrihtk eeffecrecg ktfsfkanlh rhevihtger pyrcdkcgks
      421 fswrtsfikh qgthrervsa
//
LOCUS       XP_061009627             440 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 789 isoform X2 [Dama dama].
ACCESSION   XP_061009627
VERSION     XP_061009627.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153644.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..440
                     /product="zinc finger protein 789 isoform X2"
                     /calculated_mol_wt=51604
     Region          26..86
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          163..182
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          191..210
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <215..434
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          218..238
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          246..266
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          274..294
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(279,281,283,285..286,289..290,293,307,309,313..314,
                     317..318,321,335,337,339,341..342,345..346,349)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          302..322
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(302,305,318,322)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          330..350
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          358..378
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(363,365,367,369..370,373..374,377,391,393,397..398,
                     401..402,405,419,421,423,425..426,429..430,433)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          386..406
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(386,389,402,406)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          414..434
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..440
                     /gene="ZNF789"
                     /coded_by="XM_061153644.1:141..1463"
                     /db_xref="GeneID:133063812"
ORIGIN      
        1 mariqphlgd qaleamflpv swkgllsfed valyftreew dtldwaqkal yrdvmldnyr
       61 hivslgfqfp kpevicqleq weepwilevp ragtrkasgs acpdlearfq mkelapkena
      121 sedlmlwkms svkqktakep peelheynef vdiygfslpa tgdecckdfl qslnlihswr
      181 aqtrtqqgky decrkpyhqr srllrhkrtl tntksyeche cgrafqrqan lvrhqrlhss
      241 enpfecdicg qafkqkstli dhkqchsqkk pykchdcgkc frqmaylveh krihtkekpy
      301 kcskcertfs qnstlirhql ihsgekphkc ticgkafgrh stlmshqqih skqnahkcse
      361 cgesfgrnvd liqhqrihtk eeffecrecg ktfsfkanlh rhevihtger pyrcdkcgks
      421 fswrtsfikh qgthrervsa
//
LOCUS       XP_061009628             440 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 789 isoform X2 [Dama dama].
ACCESSION   XP_061009628
VERSION     XP_061009628.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153645.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..440
                     /product="zinc finger protein 789 isoform X2"
                     /calculated_mol_wt=51604
     Region          26..86
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          163..182
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          191..210
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <215..434
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          218..238
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          246..266
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          274..294
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(279,281,283,285..286,289..290,293,307,309,313..314,
                     317..318,321,335,337,339,341..342,345..346,349)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          302..322
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(302,305,318,322)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          330..350
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          358..378
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(363,365,367,369..370,373..374,377,391,393,397..398,
                     401..402,405,419,421,423,425..426,429..430,433)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          386..406
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(386,389,402,406)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          414..434
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..440
                     /gene="ZNF789"
                     /coded_by="XM_061153645.1:220..1542"
                     /db_xref="GeneID:133063812"
ORIGIN      
        1 mariqphlgd qaleamflpv swkgllsfed valyftreew dtldwaqkal yrdvmldnyr
       61 hivslgfqfp kpevicqleq weepwilevp ragtrkasgs acpdlearfq mkelapkena
      121 sedlmlwkms svkqktakep peelheynef vdiygfslpa tgdecckdfl qslnlihswr
      181 aqtrtqqgky decrkpyhqr srllrhkrtl tntksyeche cgrafqrqan lvrhqrlhss
      241 enpfecdicg qafkqkstli dhkqchsqkk pykchdcgkc frqmaylveh krihtkekpy
      301 kcskcertfs qnstlirhql ihsgekphkc ticgkafgrh stlmshqqih skqnahkcse
      361 cgesfgrnvd liqhqrihtk eeffecrecg ktfsfkanlh rhevihtger pyrcdkcgks
      421 fswrtsfikh qgthrervsa
//
LOCUS       XP_061009629             440 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 789 isoform X2 [Dama dama].
ACCESSION   XP_061009629
VERSION     XP_061009629.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153646.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..440
                     /product="zinc finger protein 789 isoform X2"
                     /calculated_mol_wt=51604
     Region          26..86
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          163..182
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          191..210
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <215..434
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          218..238
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          246..266
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          274..294
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(279,281,283,285..286,289..290,293,307,309,313..314,
                     317..318,321,335,337,339,341..342,345..346,349)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          302..322
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(302,305,318,322)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          330..350
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          358..378
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(363,365,367,369..370,373..374,377,391,393,397..398,
                     401..402,405,419,421,423,425..426,429..430,433)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          386..406
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(386,389,402,406)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          414..434
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..440
                     /gene="ZNF789"
                     /coded_by="XM_061153646.1:2175..3497"
                     /db_xref="GeneID:133063812"
ORIGIN      
        1 mariqphlgd qaleamflpv swkgllsfed valyftreew dtldwaqkal yrdvmldnyr
       61 hivslgfqfp kpevicqleq weepwilevp ragtrkasgs acpdlearfq mkelapkena
      121 sedlmlwkms svkqktakep peelheynef vdiygfslpa tgdecckdfl qslnlihswr
      181 aqtrtqqgky decrkpyhqr srllrhkrtl tntksyeche cgrafqrqan lvrhqrlhss
      241 enpfecdicg qafkqkstli dhkqchsqkk pykchdcgkc frqmaylveh krihtkekpy
      301 kcskcertfs qnstlirhql ihsgekphkc ticgkafgrh stlmshqqih skqnahkcse
      361 cgesfgrnvd liqhqrihtk eeffecrecg ktfsfkanlh rhevihtger pyrcdkcgks
      421 fswrtsfikh qgthrervsa
//
LOCUS       XP_061009630             440 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 789 isoform X2 [Dama dama].
ACCESSION   XP_061009630
VERSION     XP_061009630.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153647.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..440
                     /product="zinc finger protein 789 isoform X2"
                     /calculated_mol_wt=51604
     Region          26..86
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          163..182
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          191..210
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <215..434
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          218..238
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          246..266
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          274..294
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(279,281,283,285..286,289..290,293,307,309,313..314,
                     317..318,321,335,337,339,341..342,345..346,349)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          302..322
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(302,305,318,322)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          330..350
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          358..378
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(363,365,367,369..370,373..374,377,391,393,397..398,
                     401..402,405,419,421,423,425..426,429..430,433)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          386..406
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(386,389,402,406)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          414..434
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..440
                     /gene="ZNF789"
                     /coded_by="XM_061153647.1:200..1522"
                     /db_xref="GeneID:133063812"
ORIGIN      
        1 mariqphlgd qaleamflpv swkgllsfed valyftreew dtldwaqkal yrdvmldnyr
       61 hivslgfqfp kpevicqleq weepwilevp ragtrkasgs acpdlearfq mkelapkena
      121 sedlmlwkms svkqktakep peelheynef vdiygfslpa tgdecckdfl qslnlihswr
      181 aqtrtqqgky decrkpyhqr srllrhkrtl tntksyeche cgrafqrqan lvrhqrlhss
      241 enpfecdicg qafkqkstli dhkqchsqkk pykchdcgkc frqmaylveh krihtkekpy
      301 kcskcertfs qnstlirhql ihsgekphkc ticgkafgrh stlmshqqih skqnahkcse
      361 cgesfgrnvd liqhqrihtk eeffecrecg ktfsfkanlh rhevihtger pyrcdkcgks
      421 fswrtsfikh qgthrervsa
//
LOCUS       XP_061009631             440 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 789 isoform X2 [Dama dama].
ACCESSION   XP_061009631
VERSION     XP_061009631.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153648.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..440
                     /product="zinc finger protein 789 isoform X2"
                     /calculated_mol_wt=51604
     Region          26..86
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          163..182
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          191..210
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <215..434
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          218..238
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          246..266
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          274..294
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(279,281,283,285..286,289..290,293,307,309,313..314,
                     317..318,321,335,337,339,341..342,345..346,349)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          302..322
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(302,305,318,322)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          330..350
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          358..378
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(363,365,367,369..370,373..374,377,391,393,397..398,
                     401..402,405,419,421,423,425..426,429..430,433)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          386..406
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(386,389,402,406)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          414..434
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..440
                     /gene="ZNF789"
                     /coded_by="XM_061153648.1:67..1389"
                     /db_xref="GeneID:133063812"
ORIGIN      
        1 mariqphlgd qaleamflpv swkgllsfed valyftreew dtldwaqkal yrdvmldnyr
       61 hivslgfqfp kpevicqleq weepwilevp ragtrkasgs acpdlearfq mkelapkena
      121 sedlmlwkms svkqktakep peelheynef vdiygfslpa tgdecckdfl qslnlihswr
      181 aqtrtqqgky decrkpyhqr srllrhkrtl tntksyeche cgrafqrqan lvrhqrlhss
      241 enpfecdicg qafkqkstli dhkqchsqkk pykchdcgkc frqmaylveh krihtkekpy
      301 kcskcertfs qnstlirhql ihsgekphkc ticgkafgrh stlmshqqih skqnahkcse
      361 cgesfgrnvd liqhqrihtk eeffecrecg ktfsfkanlh rhevihtger pyrcdkcgks
      421 fswrtsfikh qgthrervsa
//
LOCUS       XP_061009632             440 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 789 isoform X2 [Dama dama].
ACCESSION   XP_061009632
VERSION     XP_061009632.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153649.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..440
                     /product="zinc finger protein 789 isoform X2"
                     /calculated_mol_wt=51604
     Region          26..86
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          163..182
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          191..210
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <215..434
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          218..238
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          246..266
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          274..294
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(279,281,283,285..286,289..290,293,307,309,313..314,
                     317..318,321,335,337,339,341..342,345..346,349)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          302..322
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(302,305,318,322)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          330..350
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          358..378
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(363,365,367,369..370,373..374,377,391,393,397..398,
                     401..402,405,419,421,423,425..426,429..430,433)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          386..406
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(386,389,402,406)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          414..434
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..440
                     /gene="ZNF789"
                     /coded_by="XM_061153649.1:447..1769"
                     /db_xref="GeneID:133063812"
ORIGIN      
        1 mariqphlgd qaleamflpv swkgllsfed valyftreew dtldwaqkal yrdvmldnyr
       61 hivslgfqfp kpevicqleq weepwilevp ragtrkasgs acpdlearfq mkelapkena
      121 sedlmlwkms svkqktakep peelheynef vdiygfslpa tgdecckdfl qslnlihswr
      181 aqtrtqqgky decrkpyhqr srllrhkrtl tntksyeche cgrafqrqan lvrhqrlhss
      241 enpfecdicg qafkqkstli dhkqchsqkk pykchdcgkc frqmaylveh krihtkekpy
      301 kcskcertfs qnstlirhql ihsgekphkc ticgkafgrh stlmshqqih skqnahkcse
      361 cgesfgrnvd liqhqrihtk eeffecrecg ktfsfkanlh rhevihtger pyrcdkcgks
      421 fswrtsfikh qgthrervsa
//
LOCUS       XP_061009633             402 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 225B isoform X1 [Dama dama].
ACCESSION   XP_061009633
VERSION     XP_061009633.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153650.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..402
                     /product="transmembrane protein 225B isoform X1"
                     /calculated_mol_wt=45526
     Region          129..145
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          153..173
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          165..188
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          179..201
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          181..201
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          205..>265
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          209..229
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(209,212,225,229)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          237..257
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(242,244,246,248..249,252..253,256,270,272,276..277,
                     280..281,284,298,300,302,304..305,308..309,312)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          <246..398
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          265..285
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(265,268,281,285)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          293..313
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          321..341
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(321,324,337,341)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          349..369
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          377..397
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..402
                     /gene="TMEM225B"
                     /coded_by="XM_061153650.1:703..1911"
                     /db_xref="GeneID:133063814"
ORIGIN      
        1 mapevrveep afpvsleavv aaaavlgqlr agclppvsgs edflektlal erhrgaggaa
       61 lqpmektpeq msldspcpsp eqeprkttdg etwtedqlii kqkslevgtr phegdeceqn
      121 khegpyeygr nfsnmsdfiq qsyvlieeks qmcnvcgklf rrnayltqhk kihmqekayk
      181 checgkafgh ssnlsqhqri hteekpyecd ecgrafrrss hlvqhqvtht gevsyvcnec
      241 gkafgrsssl lrhqrihsre kpydctecgk afsqsshlta hqrvhtkerp yecsdcgkay
      301 srnshlvehq rvhtgetpyg cnecgksfsr sslffkhhri htgerpyecs ecgkafscns
      361 yliqhqkths gvksskhkec gktfkhnsyl ihhlgthtre kl
//
LOCUS       XP_061009634             245 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 225B isoform X2 [Dama dama].
ACCESSION   XP_061009634
VERSION     XP_061009634.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153651.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..245
                     /product="transmembrane protein 225B isoform X2"
                     /calculated_mol_wt=27320
     CDS             1..245
                     /gene="TMEM225B"
                     /coded_by="XM_061153651.1:428..1165"
                     /db_xref="GeneID:133063814"
ORIGIN      
        1 maelafesge lqgaptptpf cvsvmltied rdvkgftwai apaltslgyl lillvsifpf
       61 wvrlvneesq evffsglfen cfhikcwkpr plsiyvilgr vsllsavvls flttfimvsf
      121 asqlfprtrk hnfvsafisf ltgacaflal llhaleiqsl rmkpsppqfs iqwpyyvlgf
      181 sillfmvaga icliheiacp rchllpisqs tedtqeisyl enldslggel sstqketllk
      241 eetii
//
LOCUS       XP_061009636             245 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 225B isoform X2 [Dama dama].
ACCESSION   XP_061009636
VERSION     XP_061009636.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153653.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..245
                     /product="transmembrane protein 225B isoform X2"
                     /calculated_mol_wt=27320
     CDS             1..245
                     /gene="TMEM225B"
                     /coded_by="XM_061153653.1:303..1040"
                     /db_xref="GeneID:133063814"
ORIGIN      
        1 maelafesge lqgaptptpf cvsvmltied rdvkgftwai apaltslgyl lillvsifpf
       61 wvrlvneesq evffsglfen cfhikcwkpr plsiyvilgr vsllsavvls flttfimvsf
      121 asqlfprtrk hnfvsafisf ltgacaflal llhaleiqsl rmkpsppqfs iqwpyyvlgf
      181 sillfmvaga icliheiacp rchllpisqs tedtqeisyl enldslggel sstqketllk
      241 eetii
//
LOCUS       XP_061009637             226 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 225B isoform X3 [Dama dama].
ACCESSION   XP_061009637
VERSION     XP_061009637.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153654.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..226
                     /product="transmembrane protein 225B isoform X3"
                     /calculated_mol_wt=25397
     CDS             1..226
                     /gene="TMEM225B"
                     /coded_by="XM_061153654.1:198..878"
                     /db_xref="GeneID:133063814"
ORIGIN      
        1 mgrpvmltie drdvkgftwa iapaltslgy llillvsifp fwvrlvnees qevffsglfe
       61 ncfhikcwkp rplsiyvilg rvsllsavvl sflttfimvs fasqlfprtr khnfvsafis
      121 fltgacafla lllhaleiqs lrmkpsppqf siqwpyyvlg fsillfmvag aicliheiac
      181 prchllpisq stedtqeisy lenldslgge lsstqketll keetii
//
LOCUS       XP_061009638             226 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 225B isoform X3 [Dama dama].
ACCESSION   XP_061009638
VERSION     XP_061009638.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153655.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..226
                     /product="transmembrane protein 225B isoform X3"
                     /calculated_mol_wt=25397
     CDS             1..226
                     /gene="TMEM225B"
                     /coded_by="XM_061153655.1:200..880"
                     /db_xref="GeneID:133063814"
ORIGIN      
        1 mgrpvmltie drdvkgftwa iapaltslgy llillvsifp fwvrlvnees qevffsglfe
       61 ncfhikcwkp rplsiyvilg rvsllsavvl sflttfimvs fasqlfprtr khnfvsafis
      121 fltgacafla lllhaleiqs lrmkpsppqf siqwpyyvlg fsillfmvag aicliheiac
      181 prchllpisq stedtqeisy lenldslgge lsstqketll keetii
//
LOCUS       XP_061009639             221 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 225B isoform X4 [Dama dama].
ACCESSION   XP_061009639
VERSION     XP_061009639.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153656.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..221
                     /product="transmembrane protein 225B isoform X4"
                     /calculated_mol_wt=24856
     CDS             1..221
                     /gene="TMEM225B"
                     /coded_by="XM_061153656.1:380..1045"
                     /db_xref="GeneID:133063814"
ORIGIN      
        1 mltiedrdvk gftwaiapal tslgyllill vsifpfwvrl vneesqevff sglfencfhi
       61 kcwkprplsi yvilgrvsll savvlsfltt fimvsfasql fprtrkhnfv safisfltga
      121 caflalllha leiqslrmkp sppqfsiqwp yyvlgfsill fmvagaicli heiacprchl
      181 lpisqstedt qeisylenld slggelsstq ketllkeeti i
//
LOCUS       XP_061009640             221 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 225B isoform X4 [Dama dama].
ACCESSION   XP_061009640
VERSION     XP_061009640.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153657.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..221
                     /product="transmembrane protein 225B isoform X4"
                     /calculated_mol_wt=24856
     CDS             1..221
                     /gene="TMEM225B"
                     /coded_by="XM_061153657.1:378..1043"
                     /db_xref="GeneID:133063814"
ORIGIN      
        1 mltiedrdvk gftwaiapal tslgyllill vsifpfwvrl vneesqevff sglfencfhi
       61 kcwkprplsi yvilgrvsll savvlsfltt fimvsfasql fprtrkhnfv safisfltga
      121 caflalllha leiqslrmkp sppqfsiqwp yyvlgfsill fmvagaicli heiacprchl
      181 lpisqstedt qeisylenld slggelsstq ketllkeeti i
//
LOCUS       XP_061009641             167 aa            linear   MAM 02-DEC-2023
DEFINITION  phospholipase A2 inhibitor and Ly6/PLAUR domain-containing
            protein-like [Dama dama].
ACCESSION   XP_061009641
VERSION     XP_061009641.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153658.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..167
                     /product="phospholipase A2 inhibitor and Ly6/PLAUR
                     domain-containing protein-like"
                     /calculated_mol_wt=17613
     Region          <1..66
                     /region_name="TFP"
                     /note="three-fingered protein (TFP) fold found in Ly6/uPAR
                     (LU) and snake toxin superfamily; cl45932"
                     /db_xref="CDD:480272"
     Region          80..156
                     /region_name="TFP_LU_ECD_PINLYP_rpt2"
                     /note="second extracellular domain (ECD) found in
                     phospholipase A2 inhibitor and Ly6/PLAUR domain-containing
                     protein (PINLYP) and similar proteins; cd23572"
                     /db_xref="CDD:467102"
     CDS             1..167
                     /gene="LOC133063815"
                     /coded_by="XM_061153658.1:210..713"
                     /db_xref="GeneID:133063815"
ORIGIN      
        1 mktcaqdeds cisimtetnn kgsvdvtsyk gcskssecdp aflsitvale nymgsdtrcc
       61 qndgcnhkpl pafrrnlten glwcpscfsv stetctptqe vpcigeetrc valtgltqpg
      121 irfaaqgcgt eaachskpgt lvpsgsrllt iektscrpsp qasgkae
//
LOCUS       XP_061009642             730 aa            linear   MAM 02-DEC-2023
DEFINITION  pentatricopeptide repeat-containing protein 1, mitochondrial
            isoform X1 [Dama dama].
ACCESSION   XP_061009642
VERSION     XP_061009642.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153659.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..730
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..730
                     /product="pentatricopeptide repeat-containing protein 1,
                     mitochondrial isoform X1"
                     /calculated_mol_wt=81370
     Region          <205..>367
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          205..248
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          205..231
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          237..270
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          276..305
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          311..342
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          348..380
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <515..>650
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          553..579
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          585..611
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          617..646
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..730
                     /gene="PTCD1"
                     /coded_by="XM_061153659.1:986..3178"
                     /db_xref="GeneID:133063816"
ORIGIN      
        1 mtltfiilpt yarlqrrtpv mdfvrlarlf ssprpvglsi lchldplraq waggregpvw
       61 pratgwirpa paafssslsq lplgsqgqkn tgslssdpgq psptatqeeg eeesfgmlsd
      121 kyssrrmfyk staqlynlrl keqnieddee gelepkprrg prntpywyff qckrliregk
      181 laealdlfer qmlkeeclqp lecnytvlig gcgragylkk afrlyndmkk rdlepsdaty
      241 talfnvcaes pwkdsalqsa lklrqqlqar nfqlnlktyh allkmaalca dlrmcldvfk
      301 eiiqkghavt eetfsyllmg ciqdkktgfr yalqvwrqml slglqpsqhg ynlllgaard
      361 cglgdpavas avllrpreem allqppaggr ktrrraqvga drslsaklhv ealerqlfle
      421 asqaleglpe pqearapgqa qsgmetkaep ehtvaltsva pelppwglea nlltpgaapl
      481 avvsfgtvst padrlalmgg legflgkmae hglrpdiktl tllaevvepg spaessllsv
      541 ldmhgveadl tffntlmrkk skrgdlegak allpvlakrg ivpnlqtfcn laigcrrped
      601 glqllsdmre sqmtpnahiy stlinaavkk ldyaylidil kdmrrnrvpv nevvirqlef
      661 aaqyppsfdr ykgkntylek idgfrayykq wlkgmpaeet phpwqkfqtk tkgdqhtite
      721 admdkgpggr
//
LOCUS       XP_061009643             710 aa            linear   MAM 02-DEC-2023
DEFINITION  pentatricopeptide repeat-containing protein 1, mitochondrial
            isoform X2 [Dama dama].
ACCESSION   XP_061009643
VERSION     XP_061009643.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153660.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..710
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..710
                     /product="pentatricopeptide repeat-containing protein 1,
                     mitochondrial isoform X2"
                     /calculated_mol_wt=78997
     Region          <185..>347
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          185..228
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          185..211
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          217..250
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          256..285
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          291..322
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          328..360
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <495..>630
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          533..559
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          565..591
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          597..626
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..710
                     /gene="PTCD1"
                     /coded_by="XM_061153660.1:173..2305"
                     /db_xref="GeneID:133063816"
ORIGIN      
        1 mdfvrlarlf ssprpvglsi lchldplraq waggregpvw pratgwirpa paafssslsq
       61 lplgsqgqkn tgslssdpgq psptatqeeg eeesfgmlsd kyssrrmfyk staqlynlrl
      121 keqnieddee gelepkprrg prntpywyff qckrliregk laealdlfer qmlkeeclqp
      181 lecnytvlig gcgragylkk afrlyndmkk rdlepsdaty talfnvcaes pwkdsalqsa
      241 lklrqqlqar nfqlnlktyh allkmaalca dlrmcldvfk eiiqkghavt eetfsyllmg
      301 ciqdkktgfr yalqvwrqml slglqpsqhg ynlllgaard cglgdpavas avllrpreem
      361 allqppaggr ktrrraqvga drslsaklhv ealerqlfle asqaleglpe pqearapgqa
      421 qsgmetkaep ehtvaltsva pelppwglea nlltpgaapl avvsfgtvst padrlalmgg
      481 legflgkmae hglrpdiktl tllaevvepg spaessllsv ldmhgveadl tffntlmrkk
      541 skrgdlegak allpvlakrg ivpnlqtfcn laigcrrped glqllsdmre sqmtpnahiy
      601 stlinaavkk ldyaylidil kdmrrnrvpv nevvirqlef aaqyppsfdr ykgkntylek
      661 idgfrayykq wlkgmpaeet phpwqkfqtk tkgdqhtite admdkgpggr
//
LOCUS       XP_061009644              88 aa            linear   MAM 02-DEC-2023
DEFINITION  pentatricopeptide repeat-containing protein 1, mitochondrial
            isoform X3 [Dama dama].
ACCESSION   XP_061009644
VERSION     XP_061009644.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153661.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..88
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..88
                     /product="pentatricopeptide repeat-containing protein 1,
                     mitochondrial isoform X3"
                     /calculated_mol_wt=10186
     Region          <8..83
                     /region_name="WRW"
                     /note="Mitochondrial F1F0-ATP synthase, subunit f;
                     pfam10206"
                     /db_xref="CDD:431134"
     CDS             1..88
                     /gene="PTCD1"
                     /coded_by="XM_061153661.1:78..344"
                     /db_xref="GeneID:133063816"
ORIGIN      
        1 masvvplkek kllevklgel pswvlmrdft psgiagafqr gyyryynkyv nvkkgsiagl
       61 smvlaayvff nycrsykelk herlrkyh
//
LOCUS       XP_061009646             759 aa            linear   MAM 02-DEC-2023
DEFINITION  pentatricopeptide repeat-containing protein 1, mitochondrial
            isoform X4 [Dama dama].
ACCESSION   XP_061009646
VERSION     XP_061009646.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153663.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..759
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..759
                     /product="pentatricopeptide repeat-containing protein 1,
                     mitochondrial isoform X4"
                     /calculated_mol_wt=84249
     Region          <8..>41
                     /region_name="WRW"
                     /note="Mitochondrial F1F0-ATP synthase, subunit f;
                     pfam10206"
                     /db_xref="CDD:431134"
     Region          <234..>396
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          234..277
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          234..260
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          266..299
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          305..334
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          340..371
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          377..409
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <544..>679
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          582..608
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          614..640
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          646..675
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..759
                     /gene="PTCD1"
                     /coded_by="XM_061153663.1:82..2361"
                     /db_xref="GeneID:133063816"
ORIGIN      
        1 masvvplkek kllevklgel pswvlmrdft psgiagafqr gtggtrtpvm dfvrlarlfs
       61 sprpvglsil chldplraqw aggregpvwp ratgwirpap aafssslsql plgsqgqknt
      121 gslssdpgqp sptatqeege eesfgmlsdk yssrrmfyks taqlynlrlk eqnieddeeg
      181 elepkprrgp rntpywyffq ckrliregkl aealdlferq mlkeeclqpl ecnytvligg
      241 cgragylkka frlyndmkkr dlepsdatyt alfnvcaesp wkdsalqsal klrqqlqarn
      301 fqlnlktyha llkmaalcad lrmcldvfke iiqkghavte etfsyllmgc iqdkktgfry
      361 alqvwrqmls lglqpsqhgy nlllgaardc glgdpavasa vllrpreema llqppaggrk
      421 trrraqvgad rslsaklhve alerqlflea sqaleglpep qearapgqaq sgmetkaepe
      481 htvaltsvap elppwglean lltpgaapla vvsfgtvstp adrlalmggl egflgkmaeh
      541 glrpdiktlt llaevvepgs paessllsvl dmhgveadlt ffntlmrkks krgdlegaka
      601 llpvlakrgi vpnlqtfcnl aigcrrpedg lqllsdmres qmtpnahiys tlinaavkkl
      661 dyaylidilk dmrrnrvpvn evvirqlefa aqyppsfdry kgkntyleki dgfrayykqw
      721 lkgmpaeetp hpwqkfqtkt kgdqhtitea dmdkgpggr
//
LOCUS       XP_061009647             372 aa            linear   MAM 02-DEC-2023
DEFINITION  actin-related protein 2/3 complex subunit 1B [Dama dama].
ACCESSION   XP_061009647
VERSION     XP_061009647.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153664.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..372
                     /product="actin-related protein 2/3 complex subunit 1B"
                     /calculated_mol_wt=40985
     Region          11..50
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <15..264
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          56..93
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          99..138
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          146..199
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          205..241
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          247..286
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          329..357
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..372
                     /gene="ARPC1B"
                     /coded_by="XM_061153664.1:114..1232"
                     /db_xref="GeneID:133063817"
ORIGIN      
        1 mayhsflvep ischawnkdr tqiaicpnnh evhiyeksgn kwvqvhelke hngqvtgidw
       61 apesnrivtc gtdrnayvwt lkgrtwkptl vilrinraar cvrwapkenk favgsgsrvi
      121 sicyfeqend wwvckhikkp irstvlsldw hpnnvllaag scdfkcrifs ayikeveerp
      181 aptpwgskmp fgelmfesss scgwvhgvcf sdsgsrvawv shdstvclad adkkmavatl
      241 asetlpllav tfitenslva aghdcfpvlf tydraagkls fggrldvpkq ssqrgltare
      301 rfqnldkkas segsaaagag ldslhknsvs qisvlsggka kcsqfcttgm dggmsiwdvk
      361 slesalkdlk ii
//
LOCUS       XP_061009648             269 aa            linear   MAM 02-DEC-2023
DEFINITION  cleavage and polyadenylation specificity factor subunit 4 isoform
            X1 [Dama dama].
ACCESSION   XP_061009648
VERSION     XP_061009648.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153665.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..269
                     /product="cleavage and polyadenylation specificity factor
                     subunit 4 isoform X1"
                     /calculated_mol_wt=30154
     Region          <25..211
                     /region_name="YTH1"
                     /note="Cleavage and polyadenylation specificity factor
                     (CPSF) Clipper subunit and related makorin family
                     Zn-finger proteins [General function prediction only];
                     COG5084"
                     /db_xref="CDD:227416"
     Region          <226..>258
                     /region_name="COG5222"
                     /note="Uncharacterized conserved protein, contains RING
                     Zn-finger [General function prediction only]"
                     /db_xref="CDD:227547"
     CDS             1..269
                     /gene="CPSF4"
                     /coded_by="XM_061153665.1:154..963"
                     /db_xref="GeneID:133063818"
ORIGIN      
        1 mqeiiasvdh ikfdleiave qqlgaqplpf pgmdksgaav cefflkaacg kggmcpfrhi
       61 sgektvvckh wlrglckkgd qceflheydm tkmpecyfys kfgecsnkec pflhidpesk
      121 ikdcpwydrg fckhgplcrh rhtrrvicvn ylvgfcpegp sckfmhprfe lpmgtteqpp
      181 lpqqtqpptk qsnnpplqrs ssliqltsqn sspnqqrtpq vigvmqsqns sagnrgprpl
      241 eqvtcykcge kghyanrctk ghlaflsgq
//
LOCUS       XP_061009649             244 aa            linear   MAM 02-DEC-2023
DEFINITION  cleavage and polyadenylation specificity factor subunit 4 isoform
            X2 [Dama dama].
ACCESSION   XP_061009649
VERSION     XP_061009649.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153666.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..244
                     /product="cleavage and polyadenylation specificity factor
                     subunit 4 isoform X2"
                     /calculated_mol_wt=27446
     Region          <25..176
                     /region_name="YTH1"
                     /note="Cleavage and polyadenylation specificity factor
                     (CPSF) Clipper subunit and related makorin family
                     Zn-finger proteins [General function prediction only];
                     COG5084"
                     /db_xref="CDD:227416"
     Region          <201..>233
                     /region_name="COG5222"
                     /note="Uncharacterized conserved protein, contains RING
                     Zn-finger [General function prediction only]"
                     /db_xref="CDD:227547"
     CDS             1..244
                     /gene="CPSF4"
                     /coded_by="XM_061153666.1:153..887"
                     /db_xref="GeneID:133063818"
ORIGIN      
        1 mqeiiasvdh ikfdleiave qqlgaqplpf pgmdksgaav cefflkaacg kggmcpfrhi
       61 sgektvvckh wlrglckkgd qceflheydm tkmpecyfys kfgecsnkec pflhidpesk
      121 ikdcpwydrg fckhgplcrh rhtrrvicvn ylvgfcpegp sckfmhprfe lpmgtteqpp
      181 lpqqtqpptk qrtpqvigvm qsqnssagnr gprpleqvtc ykcgekghya nrctkghlaf
      241 lsgq
//
LOCUS       XP_061009650             243 aa            linear   MAM 02-DEC-2023
DEFINITION  cleavage and polyadenylation specificity factor subunit 4 isoform
            X3 [Dama dama].
ACCESSION   XP_061009650
VERSION     XP_061009650.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153667.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..243
                     /product="cleavage and polyadenylation specificity factor
                     subunit 4 isoform X3"
                     /calculated_mol_wt=27318
     Region          <25..176
                     /region_name="YTH1"
                     /note="Cleavage and polyadenylation specificity factor
                     (CPSF) Clipper subunit and related makorin family
                     Zn-finger proteins [General function prediction only];
                     COG5084"
                     /db_xref="CDD:227416"
     Region          <200..>232
                     /region_name="COG5222"
                     /note="Uncharacterized conserved protein, contains RING
                     Zn-finger [General function prediction only]"
                     /db_xref="CDD:227547"
     CDS             1..243
                     /gene="CPSF4"
                     /coded_by="XM_061153667.1:153..884"
                     /db_xref="GeneID:133063818"
ORIGIN      
        1 mqeiiasvdh ikfdleiave qqlgaqplpf pgmdksgaav cefflkaacg kggmcpfrhi
       61 sgektvvckh wlrglckkgd qceflheydm tkmpecyfys kfgecsnkec pflhidpesk
      121 ikdcpwydrg fckhgplcrh rhtrrvicvn ylvgfcpegp sckfmhprfe lpmgtteqpp
      181 lpqqtqpptk rtpqvigvmq sqnssagnrg prpleqvtcy kcgekghyan rctkghlafl
      241 sgq
//
LOCUS       XP_061009651             182 aa            linear   MAM 02-DEC-2023
DEFINITION  28 kDa heat- and acid-stable phosphoprotein [Dama dama].
ACCESSION   XP_061009651
VERSION     XP_061009651.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153668.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..182
                     /product="28 kDa heat- and acid-stable phosphoprotein"
                     /calculated_mol_wt=20557
     Region          86..150
                     /region_name="PP28"
                     /note="Casein kinase substrate phosphoprotein PP28;
                     pfam10252"
                     /db_xref="CDD:463025"
     CDS             1..182
                     /gene="PDAP1"
                     /coded_by="XM_061153668.1:112..660"
                     /db_xref="GeneID:133063819"
ORIGIN      
        1 mpkggrkggh kgrarqytsp eeidaqlqae kqkareeeeq geeggdgaag dpkkekksld
       61 sdesedeedd yqqkrkgveg lidienpnrv aqttkkvtql dldgpkelsr rereeiekqk
      121 akerymkmhl agkteqakad larlaiirkq reeaarkkee erkakddatl sgkrmqslsl
      181 nk
//
LOCUS       XP_061009652             144 aa            linear   MAM 02-DEC-2023
DEFINITION  protein BUD31 homolog [Dama dama].
ACCESSION   XP_061009652
VERSION     XP_061009652.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153669.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..144
                     /product="protein BUD31 homolog"
                     /calculated_mol_wt=16869
     Region          1..143
                     /region_name="G10"
                     /note="G10 protein; pfam01125"
                     /db_xref="CDD:426066"
     CDS             1..144
                     /gene="BUD31"
                     /coded_by="XM_061153669.1:367..801"
                     /db_xref="GeneID:133063820"
ORIGIN      
        1 mpkvkrsrka ppdgweliep tldeldqkmr eaetephegk rkveslwpif rihhqktryi
       61 fdlfykrkai srelyeycik egyadknlia kwkkqgyenl cclrciqtrd tnfgtncicr
      121 vpksklevgr iiecthcgcr gcsg
//
LOCUS       XP_061009653             144 aa            linear   MAM 02-DEC-2023
DEFINITION  protein BUD31 homolog [Dama dama].
ACCESSION   XP_061009653
VERSION     XP_061009653.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153670.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..144
                     /product="protein BUD31 homolog"
                     /calculated_mol_wt=16869
     Region          1..143
                     /region_name="G10"
                     /note="G10 protein; pfam01125"
                     /db_xref="CDD:426066"
     CDS             1..144
                     /gene="BUD31"
                     /coded_by="XM_061153670.1:397..831"
                     /db_xref="GeneID:133063820"
ORIGIN      
        1 mpkvkrsrka ppdgweliep tldeldqkmr eaetephegk rkveslwpif rihhqktryi
       61 fdlfykrkai srelyeycik egyadknlia kwkkqgyenl cclrciqtrd tnfgtncicr
      121 vpksklevgr iiecthcgcr gcsg
//
LOCUS       XP_061009654             144 aa            linear   MAM 02-DEC-2023
DEFINITION  protein BUD31 homolog [Dama dama].
ACCESSION   XP_061009654
VERSION     XP_061009654.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153671.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..144
                     /product="protein BUD31 homolog"
                     /calculated_mol_wt=16869
     Region          1..143
                     /region_name="G10"
                     /note="G10 protein; pfam01125"
                     /db_xref="CDD:426066"
     CDS             1..144
                     /gene="BUD31"
                     /coded_by="XM_061153671.1:234..668"
                     /db_xref="GeneID:133063820"
ORIGIN      
        1 mpkvkrsrka ppdgweliep tldeldqkmr eaetephegk rkveslwpif rihhqktryi
       61 fdlfykrkai srelyeycik egyadknlia kwkkqgyenl cclrciqtrd tnfgtncicr
      121 vpksklevgr iiecthcgcr gcsg
//
LOCUS       XP_061009655             370 aa            linear   MAM 02-DEC-2023
DEFINITION  actin-related protein 2/3 complex subunit 1A isoform X1 [Dama
            dama].
ACCESSION   XP_061009655
VERSION     XP_061009655.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153672.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..370
                     /product="actin-related protein 2/3 complex subunit 1A
                     isoform X1"
                     /calculated_mol_wt=41408
     Region          11..50
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <15..266
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          56..93
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          98..138
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          146..199
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          207..243
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          249..287
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..370
                     /gene="ARPC1A"
                     /coded_by="XM_061153672.1:67..1179"
                     /db_xref="GeneID:133063822"
ORIGIN      
        1 mslhqfllep itchawnrdr tqialspnnh evhiykkngg qwvkahelke hnghitgidw
       61 apksdrivtc gadrnayvws qkdgvwkptl vilrinraat fvkwsplenk favgsgarli
      121 svcyfesend wwvskhikkp irstvlsldw hpnnvllaag scdfkcrvfs ayikevdekp
      181 astpwgskmp fgqlmsefgg sgtggwvhgv sfsasgsrla wvshdstvsv adasksvqvs
      241 tlkteflpll svsfvsensv vaaghdccpm lfnyddrgcl tfvskldipk qsiqrnmsam
      301 erfrnmdkra ttedrntale tlhqnsitqv siyevdkqdc rkfcttgidg amtiwdfktl
      361 essiqglrim
//
LOCUS       XP_061009656             370 aa            linear   MAM 02-DEC-2023
DEFINITION  actin-related protein 2/3 complex subunit 1A isoform X1 [Dama
            dama].
ACCESSION   XP_061009656
VERSION     XP_061009656.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153673.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..370
                     /product="actin-related protein 2/3 complex subunit 1A
                     isoform X1"
                     /calculated_mol_wt=41408
     Region          11..50
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <15..266
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          56..93
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          98..138
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          146..199
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          207..243
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          249..287
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..370
                     /gene="ARPC1A"
                     /coded_by="XM_061153673.1:163..1275"
                     /db_xref="GeneID:133063822"
ORIGIN      
        1 mslhqfllep itchawnrdr tqialspnnh evhiykkngg qwvkahelke hnghitgidw
       61 apksdrivtc gadrnayvws qkdgvwkptl vilrinraat fvkwsplenk favgsgarli
      121 svcyfesend wwvskhikkp irstvlsldw hpnnvllaag scdfkcrvfs ayikevdekp
      181 astpwgskmp fgqlmsefgg sgtggwvhgv sfsasgsrla wvshdstvsv adasksvqvs
      241 tlkteflpll svsfvsensv vaaghdccpm lfnyddrgcl tfvskldipk qsiqrnmsam
      301 erfrnmdkra ttedrntale tlhqnsitqv siyevdkqdc rkfcttgidg amtiwdfktl
      361 essiqglrim
//
LOCUS       XP_061009657             363 aa            linear   MAM 02-DEC-2023
DEFINITION  actin-related protein 2/3 complex subunit 1A isoform X2 [Dama
            dama].
ACCESSION   XP_061009657
VERSION     XP_061009657.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153674.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..363
                     /product="actin-related protein 2/3 complex subunit 1A
                     isoform X2"
                     /calculated_mol_wt=40649
     Region          11..50
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <15..266
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          56..93
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          98..138
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          146..199
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          207..243
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          249..287
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..363
                     /gene="ARPC1A"
                     /coded_by="XM_061153674.1:76..1167"
                     /db_xref="GeneID:133063822"
ORIGIN      
        1 mslhqfllep itchawnrdr tqialspnnh evhiykkngg qwvkahelke hnghitgidw
       61 apksdrivtc gadrnayvws qkdgvwkptl vilrinraat fvkwsplenk favgsgarli
      121 svcyfesend wwvskhikkp irstvlsldw hpnnvllaag scdfkcrvfs ayikevdekp
      181 astpwgskmp fgqlmsefgg sgtggwvhgv sfsasgsrla wvshdstvsv adasksvqvs
      241 tlkteflpll svsfvsensv vaaghdccpm lfnyddrgcl tfvskldipk qsiqrnmsam
      301 erfrnmdkra ttedrntale tlhqnsitqv siyevdkqdc rkfcttgidg amtiwdfkgl
      361 rim
//
LOCUS       XP_061009659             731 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase SMURF1 isoform X1 [Dama dama].
ACCESSION   XP_061009659
VERSION     XP_061009659.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153676.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..731
                     /product="E3 ubiquitin-protein ligase SMURF1 isoform X1"
                     /calculated_mol_wt=83148
     Region          14..138
                     /region_name="C2_Smurf-like"
                     /note="C2 domain present in Smad ubiquitination-related
                     factor (Smurf)-like proteins; cd08382"
                     /db_xref="CDD:176028"
     Site            order(29,35,82,84,93,95)
                     /site_type="other"
                     /note="putative Ca2+ binding pocket [ion binding]"
                     /db_xref="CDD:176028"
     Region          236..267
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(251,262)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          281..313
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(297,308)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          373..728
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cd00078"
                     /db_xref="CDD:238033"
     Site            order(379,409,420,481,654,693..694,697..701,721,728)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Site            order(509,512..513,515..516,519,525,527,531..532,534,539,
                     544,561,565)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..731
                     /gene="SMURF1"
                     /coded_by="XM_061153676.1:63..2258"
                     /db_xref="GeneID:133063824"
ORIGIN      
        1 msnpgtrrng ssikirltvl caknlakkdf frlpdpfaki vvdgsgqchs tdtvkntldp
       61 kwnqhydlyv gktdsitisv wnhkkihkkq gagflgcvrl lsnaisrlkd tgyqrldlck
      121 lnpsdtdavr gqivvslqtr drigtggsvv dcrglleseg tvyedsgpgr plscfmeepa
      181 pytdgpgaaa gggncrfves psqdqrlqaq rlrnpevrgs lqtpqnrphg hqspelpegy
      241 eqrttvqgqv yflhtqtgvs twhdpriprd lnsvncdelg plppgwevrs tvsgriyfvd
      301 hnnrttqftd prlhhimthq cqlkepsqpp pppsegsved eelpaqryer dlvqklkvlr
      361 helslqqpqa ghcrievsre eifeesyrqi mkmrpkdlkk rlmvkfrgee gldyggvare
      421 wlyllcheml npyyglfqys tdniymlqin pdssinpdhl syfhfvgrim glavfhghyi
      481 nggftvpfyk qllgkpiqls dlesvdpelh kslvwilend itpvldhtfc vehnafgril
      541 qhelkpngrn vpvteenkke yvrlyvnwrf mrgieaqfla lqkgfnelip qhllkpfdqk
      601 eleliiggld kidlddwksn trlkhcgads nvvrwfwqav etfdeerrar llqfvtgstr
      661 vplqgfkalq gstgaagprl ftihlidant dnlpkahtcf nridippyes yeklyekllt
      721 aveetcgfav e
//
LOCUS       XP_061009660             728 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase SMURF1 isoform X2 [Dama dama].
ACCESSION   XP_061009660
VERSION     XP_061009660.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153677.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..728
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..728
                     /product="E3 ubiquitin-protein ligase SMURF1 isoform X2"
                     /calculated_mol_wt=82902
     Region          14..138
                     /region_name="C2_Smurf-like"
                     /note="C2 domain present in Smad ubiquitination-related
                     factor (Smurf)-like proteins; cd08382"
                     /db_xref="CDD:176028"
     Site            order(29,35,82,84,93,95)
                     /site_type="other"
                     /note="putative Ca2+ binding pocket [ion binding]"
                     /db_xref="CDD:176028"
     Region          236..267
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(251,262)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          281..313
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(297,308)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          373..725
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cd00078"
                     /db_xref="CDD:238033"
     Site            order(379,409,420,481,654,690..691,694..698,718,725)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Site            order(509,512..513,515..516,519,525,527,531..532,534,539,
                     544,561,565)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..728
                     /gene="SMURF1"
                     /coded_by="XM_061153677.1:63..2249"
                     /db_xref="GeneID:133063824"
ORIGIN      
        1 msnpgtrrng ssikirltvl caknlakkdf frlpdpfaki vvdgsgqchs tdtvkntldp
       61 kwnqhydlyv gktdsitisv wnhkkihkkq gagflgcvrl lsnaisrlkd tgyqrldlck
      121 lnpsdtdavr gqivvslqtr drigtggsvv dcrglleseg tvyedsgpgr plscfmeepa
      181 pytdgpgaaa gggncrfves psqdqrlqaq rlrnpevrgs lqtpqnrphg hqspelpegy
      241 eqrttvqgqv yflhtqtgvs twhdpriprd lnsvncdelg plppgwevrs tvsgriyfvd
      301 hnnrttqftd prlhhimthq cqlkepsqpp pppsegsved eelpaqryer dlvqklkvlr
      361 helslqqpqa ghcrievsre eifeesyrqi mkmrpkdlkk rlmvkfrgee gldyggvare
      421 wlyllcheml npyyglfqys tdniymlqin pdssinpdhl syfhfvgrim glavfhghyi
      481 nggftvpfyk qllgkpiqls dlesvdpelh kslvwilend itpvldhtfc vehnafgril
      541 qhelkpngrn vpvteenkke yvrlyvnwrf mrgieaqfla lqkgfnelip qhllkpfdqk
      601 eleliiggld kidlddwksn trlkhcgads nvvrwfwqav etfdeerrar llqfvtgstr
      661 vplqgfkalq gaagprlfti hlidantdnl pkahtcfnri dippyesyek lyeklltave
      721 etcgfave
//
LOCUS       XP_061009661            3860 aa            linear   MAM 02-DEC-2023
DEFINITION  transformation/transcription domain-associated protein isoform X1
            [Dama dama].
ACCESSION   XP_061009661
VERSION     XP_061009661.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153678.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3860
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3860
                     /product="transformation/transcription domain-associated
                     protein isoform X1"
                     /calculated_mol_wt=436782
     Region          276..882
                     /region_name="Tra1_central"
                     /note="Tra1 HEAT repeat central region; pfam20175"
                     /db_xref="CDD:466326"
     Region          894..2665
                     /region_name="Tra1_ring"
                     /note="Tra1 HEAT repeat ring region; pfam20206"
                     /db_xref="CDD:466357"
     Region          2834..3187
                     /region_name="FAT"
                     /note="FAT domain; pfam02259"
                     /db_xref="CDD:396714"
     Region          3497..3784
                     /region_name="PIKK_TRRAP"
                     /note="Pseudokinase domain of TRansformation/tRanscription
                     domain-Associated Protein; cd05163"
                     /db_xref="CDD:270707"
     Region          3833..3860
                     /region_name="FATC"
                     /note="FATC domain; pfam02260"
                     /db_xref="CDD:460514"
     CDS             1..3860
                     /gene="TRRAP"
                     /coded_by="XM_061153678.1:132..11714"
                     /db_xref="GeneID:133063825"
ORIGIN      
        1 mafvatqgat vvdqttlmkk ylqfvaaltd vntpdetklk mmqevsenfe nvtsspqyst
       61 flehiiprfl tflqdgevqf lqekpaqqlr klvleiihri ptnehlrpht knvlsvmfrf
      121 leteneenvl iclriiielh kqfrppitqe ihhfldfvkq iykelpkvvn ryfenpqvip
      181 entvpppemv gmvttiavkv nperddsetr ahsiiprgsl slkvlaelpi ivvlmyqlyk
      241 lnihnvvaef vplimntiai qvsaqarqhk lynkelyadf iaaqiktlsf layiiriyqe
      301 lvtkysqqmv kgmlqllsnc paetahlrke lliaakhilt telrnqfipc mdklfdesil
      361 igsgytaret lrplaystla dlvhhvrqhl plsdlslavq lfakniddes lpssiqtmsc
      421 klllnlvdci rskseqesgn grdvlmrmle vfvlkfhtia ryqlsaifkk ckpqselgav
      481 eaalpgvpat paapgpapsp apvpapappp pppptpatpv tpapvppfek qgekdkedkq
      541 tfqvtdcrsl vktlvcgvkt itwgitscka pgeaqfipnk qlqpketqiy iklvkyamqa
      601 ldiyqvqiag ngqtyirvan cqtvrmkeek evlehfagvf tmmnpltfke ifqttvpymv
      661 erisknyalq ivansflanp ttsalfatil veylldrlpe mgsnvelsnl ylklfklvfg
      721 svslfaaene qmlkphlhki vnssmelaqt akepynyfll lralfrsigg gshdllyqef
      781 lpllpnllqg lnmlqsglhk qhmkdlfvel cltvpvrlss llpylpmlmd plvsalngsq
      841 tlvsqglrtl elcvdnlqpd flydhiqpvr aelmqalwrt lrnpadsish vayrvlgkfg
      901 gsnrkmlkes qkllyvvtev qgpsvtvefs dckaslqlpm ekaietaldc lksantepyy
      961 rrqawevikc flvammsled nkhalyqlla hpnftektip nviishryka qdtparktfe
     1021 qaltgafmsa vikdlrpsal pfvaslirhy tmvavaqqcg pfllpcyqgg sqpstamfhs
     1081 eengskgmdp lvlidaiaic mayeekelck igevalavif dvasiilgsk eracqlplfs
     1141 yiverlcacc yeqawyaklg gvvsikflme rlpltwvlqn qqtflkallf vmmdltgevs
     1201 ngavamaktt leqllmrcat plkdeeraee ivaaqeksfh hvthdlvrev tspnstvrkq
     1261 amhslqvlaq vtgksvtvim ephkevlqdm vppkkhllrh qpanaqiglm egntfcttlq
     1321 prlftmdlnv vehkvfytel lnlceaedsa ltklpcyksl pslvplriaa lnalaacnyl
     1381 pqsrekiiaa lfkalnstns elqeageacm rkflegatie vdqihthmrp llmmlgdyrs
     1441 ltlnvvnrlt svtrlfpnsf ndkfcdqmmq hlrkwmevvv lthkggqrsd gnemkicsai
     1501 inlfhlipaa pqtlvkplle vvmkteraml ieagspfrep likfltrhps qtvelfmmea
     1561 tlndpqwsrm fmsflkhkda rplrdvlaan pnrfitlllp ggtqtavrpg spststlrld
     1621 lqfqavkiis iivknedswl asqhslvsql rrvwvsetfq erhrkenmaa tnwkepklla
     1681 ycllnyckkn ygdiellfql lraftgrflc nmtflkeyme eeipknynia qkralffrfv
     1741 dfndpnfgde lkakvlqhil npaflysfek gegeqllgpp npegdnpesi tsvfitkvle
     1801 pekqadmlds lrihllqfat llvehaphhi hdnnknrnsk lrrlmtfawp cllskacvdp
     1861 ackysghlll ahiiakfaih kkivlqvfhs llkahamear aivrqamail tpavparmed
     1921 ghqmlthwtr kiiveeghtv pqlvhilhli vqhfkvyypv rhhlvqhmvs amqrlgftps
     1981 vtieqrrlav dlsevvikwe lqrikdqqpd sdmdpnssge gvtsvsssik rglsvdsaqe
     2041 vkrfrtatga isavfgrsqs lpgadsllak pidkqhtdtv vnflirvacq vndntsaags
     2101 pgevlsrrcv tllktalrpd mwakselklq wfdkllmsve qpnqvnygni ctglevlsfl
     2161 ltvlqppail ssfkplqrgv aacmtcgntk vlravhslls rlmslfptep stssvaskye
     2221 eleclyaavg kviyegltny ekatsanpsq lfgtlmilks acsnnpsyid rlisvfmrsl
     2281 qkmvrehlsp qaasgsteaa sgtselvmls lelvktrlav msmemrknfi qailtsliek
     2341 spdakilrsv vkiveewvkn nspmaanqtp tlreksillv kmmtyiekrf pedlelnaqf
     2401 ldlvnyvyrd etlsgselta klepaflsgl rcaqplirak ffevfdnsmk rrvyerllyv
     2461 tcsqnweamg nhfwikqcie lllavcekst pigtscqgam lpsitnvinl adshdraafa
     2521 mvthvkqepr erenseskee dveidielap gdqtstpktk elsekdignq lhmltnrhdk
     2581 fldtlrevkt gallgafvql chisttlaek twvqlfprlw kilsdrqqha lageispflc
     2641 sgshqvqrdc qpsalncfve amsqcvppip irpcvlkylg kthnlwfrst lmlehqafek
     2701 glslqikpkq taefyeqesi tppqqeilds laelysllqe edmwaglwqk rckysetata
     2761 iayeqhgffe qaqesyekam dkakkehers naspaifpey qlwedhwirc skelnqweal
     2821 teygqskghi npylvlecaw rvsnwtamke alvqvevscp kemawkvnmy rgylaichpe
     2881 eqqlsfierl vemasslair ewrrlphvvs hvhtpllqaa qqiielqeaa qinaglqpsn
     2941 lgrnnslhdm ktvvktwrnr lpivsddlsh wssvfmwrqh hyqgkpawsg mpppsivtay
     3001 enssqhdpss nnamlgvhas asaiiqygki arkqglvnva ldilsrihti ptvpivdcfq
     3061 kirqqvkcyl qlagvmgkne cmqglevies tnlkyftkem taefyalkgm flaqinksee
     3121 ankafsaavq mhdvlvkawa mwgdylenif vkerqlhlgv saitcylhac rhqnesksrk
     3181 ylakvlwlls fdddkntlad avdkycigvp piqwlawipq lltclvgseg klllnlisqv
     3241 grvypqavyf pirtlyltlk ieqreryksd sgqqqpssvg nqshsasdpg piratapmwr
     3301 csrimhmqre lhptllssle givdqmvwfr enwheevlrq lqqglakcys vafeksgavs
     3361 dakitphtln fvkklvstfg vglenvsnvs tmfssaases larraqataq dpvfqklkgq
     3421 fttdfdfsvp gsmklhnlis klkkwikile aktkqlpkff lieekcrfls nfsaqtaeve
     3481 ipgeflmpkp thyyikiarf mprveivqkh ntaarrlyir ghngkiypyl vmndacltes
     3541 rreervlqll rllnpclekr kettkrhlff tvprvvavsp qmrlvednps slslveiykq
     3601 rcakkgiehd npisryydrl atvqargtqa shqvlrdilk evqsnmvprs mlkewalhtf
     3661 pnatdywtfr kmftiqlali gfaefvlhln rlnpemlqia qdtgklnvay frfdindatg
     3721 dldanrpvpf rltpnisefl ttigvsgplt asmiavarcf aqpnfkvdgi lktvlrdeii
     3781 awhkktqedt ssplsaagqp enmdsqqlvs lvqkavtaiv trlhnlaqfe ggeskvntlv
     3841 aaansldnlc rmdpawhpwl
//
LOCUS       XP_061009662            3859 aa            linear   MAM 02-DEC-2023
DEFINITION  transformation/transcription domain-associated protein isoform X2
            [Dama dama].
ACCESSION   XP_061009662
VERSION     XP_061009662.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153679.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3859
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3859
                     /product="transformation/transcription domain-associated
                     protein isoform X2"
                     /calculated_mol_wt=436653
     Region          276..881
                     /region_name="Tra1_central"
                     /note="Tra1 HEAT repeat central region; pfam20175"
                     /db_xref="CDD:466326"
     Region          893..2664
                     /region_name="Tra1_ring"
                     /note="Tra1 HEAT repeat ring region; pfam20206"
                     /db_xref="CDD:466357"
     Region          2833..3186
                     /region_name="FAT"
                     /note="FAT domain; pfam02259"
                     /db_xref="CDD:396714"
     Region          3496..3783
                     /region_name="PIKK_TRRAP"
                     /note="Pseudokinase domain of TRansformation/tRanscription
                     domain-Associated Protein; cd05163"
                     /db_xref="CDD:270707"
     Region          3832..3859
                     /region_name="FATC"
                     /note="FATC domain; pfam02260"
                     /db_xref="CDD:460514"
     CDS             1..3859
                     /gene="TRRAP"
                     /coded_by="XM_061153679.1:132..11711"
                     /db_xref="GeneID:133063825"
ORIGIN      
        1 mafvatqgat vvdqttlmkk ylqfvaaltd vntpdetklk mmqevsenfe nvtsspqyst
       61 flehiiprfl tflqdgevqf lqekpaqqlr klvleiihri ptnehlrpht knvlsvmfrf
      121 leteneenvl iclriiielh kqfrppitqe ihhfldfvkq iykelpkvvn ryfenpqvip
      181 entvpppemv gmvttiavkv nperddsetr ahsiiprgsl slkvlaelpi ivvlmyqlyk
      241 lnihnvvaef vplimntiai qvsaqarqhk lynkelyadf iaaqiktlsf layiiriyqe
      301 lvtkysqqmv kgmlqllsnc paetahlrke lliaakhilt telrnqfipc mdklfdesil
      361 igsgytaret lrplaystla dlvhhvrqhl plsdlslavq lfakniddes lpssiqtmsc
      421 klllnlvdci rskseqesgn grdvlmrmle vfvlkfhtia ryqlsaifkk ckpqselgav
      481 eaalpgvpat paapgpapsp apvpapappp pppptpatpv tpapvppfek qgekdkedkq
      541 tfqvtdcrsl vktlvcgvkt itwgitscka pgaqfipnkq lqpketqiyi klvkyamqal
      601 diyqvqiagn gqtyirvanc qtvrmkeeke vlehfagvft mmnpltfkei fqttvpymve
      661 risknyalqi vansflanpt tsalfatilv eylldrlpem gsnvelsnly lklfklvfgs
      721 vslfaaeneq mlkphlhkiv nssmelaqta kepynyflll ralfrsiggg shdllyqefl
      781 pllpnllqgl nmlqsglhkq hmkdlfvelc ltvpvrlssl lpylpmlmdp lvsalngsqt
      841 lvsqglrtle lcvdnlqpdf lydhiqpvra elmqalwrtl rnpadsishv ayrvlgkfgg
      901 snrkmlkesq kllyvvtevq gpsvtvefsd ckaslqlpme kaietaldcl ksantepyyr
      961 rqawevikcf lvammsledn khalyqllah pnftektipn viishrykaq dtparktfeq
     1021 altgafmsav ikdlrpsalp fvaslirhyt mvavaqqcgp fllpcyqggs qpstamfhse
     1081 engskgmdpl vlidaiaicm ayeekelcki gevalavifd vasiilgske racqlplfsy
     1141 iverlcaccy eqawyaklgg vvsikflmer lpltwvlqnq qtflkallfv mmdltgevsn
     1201 gavamakttl eqllmrcatp lkdeeraeei vaaqeksfhh vthdlvrevt spnstvrkqa
     1261 mhslqvlaqv tgksvtvime phkevlqdmv ppkkhllrhq panaqiglme gntfcttlqp
     1321 rlftmdlnvv ehkvfytell nlceaedsal tklpcykslp slvplriaal nalaacnylp
     1381 qsrekiiaal fkalnstnse lqeageacmr kflegatiev dqihthmrpl lmmlgdyrsl
     1441 tlnvvnrlts vtrlfpnsfn dkfcdqmmqh lrkwmevvvl thkggqrsdg nemkicsaii
     1501 nlfhlipaap qtlvkpllev vmkteramli eagspfrepl ikfltrhpsq tvelfmmeat
     1561 lndpqwsrmf msflkhkdar plrdvlaanp nrfitlllpg gtqtavrpgs pststlrldl
     1621 qfqavkiisi ivknedswla sqhslvsqlr rvwvsetfqe rhrkenmaat nwkepkllay
     1681 cllnyckkny gdiellfqll raftgrflcn mtflkeymee eipknyniaq kralffrfvd
     1741 fndpnfgdel kakvlqhiln paflysfekg egeqllgppn pegdnpesit svfitkvlep
     1801 ekqadmldsl rihllqfatl lvehaphhih dnnknrnskl rrlmtfawpc llskacvdpa
     1861 ckysghllla hiiakfaihk kivlqvfhsl lkahameara ivrqamailt pavparmedg
     1921 hqmlthwtrk iiveeghtvp qlvhilhliv qhfkvyypvr hhlvqhmvsa mqrlgftpsv
     1981 tieqrrlavd lsevvikwel qrikdqqpds dmdpnssgeg vtsvsssikr glsvdsaqev
     2041 krfrtatgai savfgrsqsl pgadsllakp idkqhtdtvv nflirvacqv ndntsaagsp
     2101 gevlsrrcvt llktalrpdm wakselklqw fdkllmsveq pnqvnygnic tglevlsfll
     2161 tvlqppails sfkplqrgva acmtcgntkv lravhsllsr lmslfpteps tssvaskyee
     2221 leclyaavgk viyegltnye katsanpsql fgtlmilksa csnnpsyidr lisvfmrslq
     2281 kmvrehlspq aasgsteaas gtselvmlsl elvktrlavm smemrknfiq ailtslieks
     2341 pdakilrsvv kiveewvknn spmaanqtpt lreksillvk mmtyiekrfp edlelnaqfl
     2401 dlvnyvyrde tlsgseltak lepaflsglr caqplirakf fevfdnsmkr rvyerllyvt
     2461 csqnweamgn hfwikqciel llavcekstp igtscqgaml psitnvinla dshdraafam
     2521 vthvkqepre renseskeed veidielapg dqtstpktke lsekdignql hmltnrhdkf
     2581 ldtlrevktg allgafvqlc histtlaekt wvqlfprlwk ilsdrqqhal ageispflcs
     2641 gshqvqrdcq psalncfvea msqcvppipi rpcvlkylgk thnlwfrstl mlehqafekg
     2701 lslqikpkqt aefyeqesit ppqqeildsl aelysllqee dmwaglwqkr ckysetatai
     2761 ayeqhgffeq aqesyekamd kakkehersn aspaifpeyq lwedhwircs kelnqwealt
     2821 eygqskghin pylvlecawr vsnwtamkea lvqvevscpk emawkvnmyr gylaichpee
     2881 qqlsfierlv emasslaire wrrlphvvsh vhtpllqaaq qiielqeaaq inaglqpsnl
     2941 grnnslhdmk tvvktwrnrl pivsddlshw ssvfmwrqhh yqgkpawsgm pppsivtaye
     3001 nssqhdpssn namlgvhasa saiiqygkia rkqglvnval dilsrihtip tvpivdcfqk
     3061 irqqvkcylq lagvmgknec mqgleviest nlkyftkemt aefyalkgmf laqinkseea
     3121 nkafsaavqm hdvlvkawam wgdylenifv kerqlhlgvs aitcylhacr hqnesksrky
     3181 lakvlwllsf dddkntlada vdkycigvpp iqwlawipql ltclvgsegk lllnlisqvg
     3241 rvypqavyfp irtlyltlki eqreryksds gqqqpssvgn qshsasdpgp iratapmwrc
     3301 srimhmqrel hptllssleg ivdqmvwfre nwheevlrql qqglakcysv afeksgavsd
     3361 akitphtlnf vkklvstfgv glenvsnvst mfssaasesl arraqataqd pvfqklkgqf
     3421 ttdfdfsvpg smklhnlisk lkkwikilea ktkqlpkffl ieekcrflsn fsaqtaevei
     3481 pgeflmpkpt hyyikiarfm prveivqkhn taarrlyirg hngkiypylv mndacltesr
     3541 reervlqllr llnpclekrk ettkrhlfft vprvvavspq mrlvednpss lslveiykqr
     3601 cakkgiehdn pisryydrla tvqargtqas hqvlrdilke vqsnmvprsm lkewalhtfp
     3661 natdywtfrk mftiqlalig faefvlhlnr lnpemlqiaq dtgklnvayf rfdindatgd
     3721 ldanrpvpfr ltpniseflt tigvsgplta smiavarcfa qpnfkvdgil ktvlrdeiia
     3781 whkktqedts splsaagqpe nmdsqqlvsl vqkavtaivt rlhnlaqfeg geskvntlva
     3841 aansldnlcr mdpawhpwl
//
LOCUS       XP_061009663            3849 aa            linear   MAM 02-DEC-2023
DEFINITION  transformation/transcription domain-associated protein isoform X3
            [Dama dama].
ACCESSION   XP_061009663
VERSION     XP_061009663.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153680.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3849
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3849
                     /product="transformation/transcription domain-associated
                     protein isoform X3"
                     /calculated_mol_wt=435659
     Region          276..882
                     /region_name="Tra1_central"
                     /note="Tra1 HEAT repeat central region; pfam20175"
                     /db_xref="CDD:466326"
     Region          894..2665
                     /region_name="Tra1_ring"
                     /note="Tra1 HEAT repeat ring region; pfam20206"
                     /db_xref="CDD:466357"
     Region          2834..3176
                     /region_name="FAT"
                     /note="FAT domain; pfam02259"
                     /db_xref="CDD:396714"
     Region          3486..3773
                     /region_name="PIKK_TRRAP"
                     /note="Pseudokinase domain of TRansformation/tRanscription
                     domain-Associated Protein; cd05163"
                     /db_xref="CDD:270707"
     Region          3822..3849
                     /region_name="FATC"
                     /note="FATC domain; pfam02260"
                     /db_xref="CDD:460514"
     CDS             1..3849
                     /gene="TRRAP"
                     /coded_by="XM_061153680.1:132..11681"
                     /db_xref="GeneID:133063825"
ORIGIN      
        1 mafvatqgat vvdqttlmkk ylqfvaaltd vntpdetklk mmqevsenfe nvtsspqyst
       61 flehiiprfl tflqdgevqf lqekpaqqlr klvleiihri ptnehlrpht knvlsvmfrf
      121 leteneenvl iclriiielh kqfrppitqe ihhfldfvkq iykelpkvvn ryfenpqvip
      181 entvpppemv gmvttiavkv nperddsetr ahsiiprgsl slkvlaelpi ivvlmyqlyk
      241 lnihnvvaef vplimntiai qvsaqarqhk lynkelyadf iaaqiktlsf layiiriyqe
      301 lvtkysqqmv kgmlqllsnc paetahlrke lliaakhilt telrnqfipc mdklfdesil
      361 igsgytaret lrplaystla dlvhhvrqhl plsdlslavq lfakniddes lpssiqtmsc
      421 klllnlvdci rskseqesgn grdvlmrmle vfvlkfhtia ryqlsaifkk ckpqselgav
      481 eaalpgvpat paapgpapsp apvpapappp pppptpatpv tpapvppfek qgekdkedkq
      541 tfqvtdcrsl vktlvcgvkt itwgitscka pgeaqfipnk qlqpketqiy iklvkyamqa
      601 ldiyqvqiag ngqtyirvan cqtvrmkeek evlehfagvf tmmnpltfke ifqttvpymv
      661 erisknyalq ivansflanp ttsalfatil veylldrlpe mgsnvelsnl ylklfklvfg
      721 svslfaaene qmlkphlhki vnssmelaqt akepynyfll lralfrsigg gshdllyqef
      781 lpllpnllqg lnmlqsglhk qhmkdlfvel cltvpvrlss llpylpmlmd plvsalngsq
      841 tlvsqglrtl elcvdnlqpd flydhiqpvr aelmqalwrt lrnpadsish vayrvlgkfg
      901 gsnrkmlkes qkllyvvtev qgpsvtvefs dckaslqlpm ekaietaldc lksantepyy
      961 rrqawevikc flvammsled nkhalyqlla hpnftektip nviishryka qdtparktfe
     1021 qaltgafmsa vikdlrpsal pfvaslirhy tmvavaqqcg pfllpcyqgg sqpstamfhs
     1081 eengskgmdp lvlidaiaic mayeekelck igevalavif dvasiilgsk eracqlplfs
     1141 yiverlcacc yeqawyaklg gvvsikflme rlpltwvlqn qqtflkallf vmmdltgevs
     1201 ngavamaktt leqllmrcat plkdeeraee ivaaqeksfh hvthdlvrev tspnstvrkq
     1261 amhslqvlaq vtgksvtvim ephkevlqdm vppkkhllrh qpanaqiglm egntfcttlq
     1321 prlftmdlnv vehkvfytel lnlceaedsa ltklpcyksl pslvplriaa lnalaacnyl
     1381 pqsrekiiaa lfkalnstns elqeageacm rkflegatie vdqihthmrp llmmlgdyrs
     1441 ltlnvvnrlt svtrlfpnsf ndkfcdqmmq hlrkwmevvv lthkggqrsd gnemkicsai
     1501 inlfhlipaa pqtlvkplle vvmkteraml ieagspfrep likfltrhps qtvelfmmea
     1561 tlndpqwsrm fmsflkhkda rplrdvlaan pnrfitlllp ggtqtavrpg spststlrld
     1621 lqfqavkiis iivknedswl asqhslvsql rrvwvsetfq erhrkenmaa tnwkepklla
     1681 ycllnyckkn ygdiellfql lraftgrflc nmtflkeyme eeipknynia qkralffrfv
     1741 dfndpnfgde lkakvlqhil npaflysfek gegeqllgpp npegdnpesi tsvfitkvle
     1801 pekqadmlds lrihllqfat llvehaphhi hdnnknrnsk lrrlmtfawp cllskacvdp
     1861 ackysghlll ahiiakfaih kkivlqvfhs llkahamear aivrqamail tpavparmed
     1921 ghqmlthwtr kiiveeghtv pqlvhilhli vqhfkvyypv rhhlvqhmvs amqrlgftps
     1981 vtieqrrlav dlsevvikwe lqrikdqqpd sdmdpnssge gvtsvsssik rglsvdsaqe
     2041 vkrfrtatga isavfgrsqs lpgadsllak pidkqhtdtv vnflirvacq vndntsaags
     2101 pgevlsrrcv tllktalrpd mwakselklq wfdkllmsve qpnqvnygni ctglevlsfl
     2161 ltvlqppail ssfkplqrgv aacmtcgntk vlravhslls rlmslfptep stssvaskye
     2221 eleclyaavg kviyegltny ekatsanpsq lfgtlmilks acsnnpsyid rlisvfmrsl
     2281 qkmvrehlsp qaasgsteaa sgtselvmls lelvktrlav msmemrknfi qailtsliek
     2341 spdakilrsv vkiveewvkn nspmaanqtp tlreksillv kmmtyiekrf pedlelnaqf
     2401 ldlvnyvyrd etlsgselta klepaflsgl rcaqplirak ffevfdnsmk rrvyerllyv
     2461 tcsqnweamg nhfwikqcie lllavcekst pigtscqgam lpsitnvinl adshdraafa
     2521 mvthvkqepr erenseskee dveidielap gdqtstpktk elsekdignq lhmltnrhdk
     2581 fldtlrevkt gallgafvql chisttlaek twvqlfprlw kilsdrqqha lageispflc
     2641 sgshqvqrdc qpsalncfve amsqcvppip irpcvlkylg kthnlwfrst lmlehqafek
     2701 glslqikpkq taefyeqesi tppqqeilds laelysllqe edmwaglwqk rckysetata
     2761 iayeqhgffe qaqesyekam dkakkehers naspaifpey qlwedhwirc skelnqweal
     2821 teygqskghi npylvlecaw rvsnwtamke alvqvevscp kemawkvnmy rgylaichpe
     2881 eqqlsfierl vemasslair ewrrlphvvs hvhtpllqaa qqiielqeaa qinaglqpsn
     2941 lgrnnslhdm ktvvktwrnr lpivsddlsh wssvfmwrqh hyqaivtaye nssqhdpssn
     3001 namlgvhasa saiiqygkia rkqglvnval dilsrihtip tvpivdcfqk irqqvkcylq
     3061 lagvmgknec mqgleviest nlkyftkemt aefyalkgmf laqinkseea nkafsaavqm
     3121 hdvlvkawam wgdylenifv kerqlhlgvs aitcylhacr hqnesksrky lakvlwllsf
     3181 dddkntlada vdkycigvpp iqwlawipql ltclvgsegk lllnlisqvg rvypqavyfp
     3241 irtlyltlki eqreryksds gqqqpssvgn qshsasdpgp iratapmwrc srimhmqrel
     3301 hptllssleg ivdqmvwfre nwheevlrql qqglakcysv afeksgavsd akitphtlnf
     3361 vkklvstfgv glenvsnvst mfssaasesl arraqataqd pvfqklkgqf ttdfdfsvpg
     3421 smklhnlisk lkkwikilea ktkqlpkffl ieekcrflsn fsaqtaevei pgeflmpkpt
     3481 hyyikiarfm prveivqkhn taarrlyirg hngkiypylv mndacltesr reervlqllr
     3541 llnpclekrk ettkrhlfft vprvvavspq mrlvednpss lslveiykqr cakkgiehdn
     3601 pisryydrla tvqargtqas hqvlrdilke vqsnmvprsm lkewalhtfp natdywtfrk
     3661 mftiqlalig faefvlhlnr lnpemlqiaq dtgklnvayf rfdindatgd ldanrpvpfr
     3721 ltpniseflt tigvsgplta smiavarcfa qpnfkvdgil ktvlrdeiia whkktqedts
     3781 splsaagqpe nmdsqqlvsl vqkavtaivt rlhnlaqfeg geskvntlva aansldnlcr
     3841 mdpawhpwl
//
LOCUS       XP_061009664            3842 aa            linear   MAM 02-DEC-2023
DEFINITION  transformation/transcription domain-associated protein isoform X4
            [Dama dama].
ACCESSION   XP_061009664
VERSION     XP_061009664.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153681.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3842
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3842
                     /product="transformation/transcription domain-associated
                     protein isoform X4"
                     /calculated_mol_wt=434999
     Region          276..882
                     /region_name="Tra1_central"
                     /note="Tra1 HEAT repeat central region; pfam20175"
                     /db_xref="CDD:466326"
     Region          894..2665
                     /region_name="Tra1_ring"
                     /note="Tra1 HEAT repeat ring region; pfam20206"
                     /db_xref="CDD:466357"
     Region          2834..3187
                     /region_name="FAT"
                     /note="FAT domain; pfam02259"
                     /db_xref="CDD:396714"
     Region          3479..3766
                     /region_name="PIKK_TRRAP"
                     /note="Pseudokinase domain of TRansformation/tRanscription
                     domain-Associated Protein; cd05163"
                     /db_xref="CDD:270707"
     Region          3815..3842
                     /region_name="FATC"
                     /note="FATC domain; pfam02260"
                     /db_xref="CDD:460514"
     CDS             1..3842
                     /gene="TRRAP"
                     /coded_by="XM_061153681.1:132..11660"
                     /db_xref="GeneID:133063825"
ORIGIN      
        1 mafvatqgat vvdqttlmkk ylqfvaaltd vntpdetklk mmqevsenfe nvtsspqyst
       61 flehiiprfl tflqdgevqf lqekpaqqlr klvleiihri ptnehlrpht knvlsvmfrf
      121 leteneenvl iclriiielh kqfrppitqe ihhfldfvkq iykelpkvvn ryfenpqvip
      181 entvpppemv gmvttiavkv nperddsetr ahsiiprgsl slkvlaelpi ivvlmyqlyk
      241 lnihnvvaef vplimntiai qvsaqarqhk lynkelyadf iaaqiktlsf layiiriyqe
      301 lvtkysqqmv kgmlqllsnc paetahlrke lliaakhilt telrnqfipc mdklfdesil
      361 igsgytaret lrplaystla dlvhhvrqhl plsdlslavq lfakniddes lpssiqtmsc
      421 klllnlvdci rskseqesgn grdvlmrmle vfvlkfhtia ryqlsaifkk ckpqselgav
      481 eaalpgvpat paapgpapsp apvpapappp pppptpatpv tpapvppfek qgekdkedkq
      541 tfqvtdcrsl vktlvcgvkt itwgitscka pgeaqfipnk qlqpketqiy iklvkyamqa
      601 ldiyqvqiag ngqtyirvan cqtvrmkeek evlehfagvf tmmnpltfke ifqttvpymv
      661 erisknyalq ivansflanp ttsalfatil veylldrlpe mgsnvelsnl ylklfklvfg
      721 svslfaaene qmlkphlhki vnssmelaqt akepynyfll lralfrsigg gshdllyqef
      781 lpllpnllqg lnmlqsglhk qhmkdlfvel cltvpvrlss llpylpmlmd plvsalngsq
      841 tlvsqglrtl elcvdnlqpd flydhiqpvr aelmqalwrt lrnpadsish vayrvlgkfg
      901 gsnrkmlkes qkllyvvtev qgpsvtvefs dckaslqlpm ekaietaldc lksantepyy
      961 rrqawevikc flvammsled nkhalyqlla hpnftektip nviishryka qdtparktfe
     1021 qaltgafmsa vikdlrpsal pfvaslirhy tmvavaqqcg pfllpcyqgg sqpstamfhs
     1081 eengskgmdp lvlidaiaic mayeekelck igevalavif dvasiilgsk eracqlplfs
     1141 yiverlcacc yeqawyaklg gvvsikflme rlpltwvlqn qqtflkallf vmmdltgevs
     1201 ngavamaktt leqllmrcat plkdeeraee ivaaqeksfh hvthdlvrev tspnstvrkq
     1261 amhslqvlaq vtgksvtvim ephkevlqdm vppkkhllrh qpanaqiglm egntfcttlq
     1321 prlftmdlnv vehkvfytel lnlceaedsa ltklpcyksl pslvplriaa lnalaacnyl
     1381 pqsrekiiaa lfkalnstns elqeageacm rkflegatie vdqihthmrp llmmlgdyrs
     1441 ltlnvvnrlt svtrlfpnsf ndkfcdqmmq hlrkwmevvv lthkggqrsd gnemkicsai
     1501 inlfhlipaa pqtlvkplle vvmkteraml ieagspfrep likfltrhps qtvelfmmea
     1561 tlndpqwsrm fmsflkhkda rplrdvlaan pnrfitlllp ggtqtavrpg spststlrld
     1621 lqfqavkiis iivknedswl asqhslvsql rrvwvsetfq erhrkenmaa tnwkepklla
     1681 ycllnyckkn ygdiellfql lraftgrflc nmtflkeyme eeipknynia qkralffrfv
     1741 dfndpnfgde lkakvlqhil npaflysfek gegeqllgpp npegdnpesi tsvfitkvle
     1801 pekqadmlds lrihllqfat llvehaphhi hdnnknrnsk lrrlmtfawp cllskacvdp
     1861 ackysghlll ahiiakfaih kkivlqvfhs llkahamear aivrqamail tpavparmed
     1921 ghqmlthwtr kiiveeghtv pqlvhilhli vqhfkvyypv rhhlvqhmvs amqrlgftps
     1981 vtieqrrlav dlsevvikwe lqrikdqqpd sdmdpnssge gvtsvsssik rglsvdsaqe
     2041 vkrfrtatga isavfgrsqs lpgadsllak pidkqhtdtv vnflirvacq vndntsaags
     2101 pgevlsrrcv tllktalrpd mwakselklq wfdkllmsve qpnqvnygni ctglevlsfl
     2161 ltvlqppail ssfkplqrgv aacmtcgntk vlravhslls rlmslfptep stssvaskye
     2221 eleclyaavg kviyegltny ekatsanpsq lfgtlmilks acsnnpsyid rlisvfmrsl
     2281 qkmvrehlsp qaasgsteaa sgtselvmls lelvktrlav msmemrknfi qailtsliek
     2341 spdakilrsv vkiveewvkn nspmaanqtp tlreksillv kmmtyiekrf pedlelnaqf
     2401 ldlvnyvyrd etlsgselta klepaflsgl rcaqplirak ffevfdnsmk rrvyerllyv
     2461 tcsqnweamg nhfwikqcie lllavcekst pigtscqgam lpsitnvinl adshdraafa
     2521 mvthvkqepr erenseskee dveidielap gdqtstpktk elsekdignq lhmltnrhdk
     2581 fldtlrevkt gallgafvql chisttlaek twvqlfprlw kilsdrqqha lageispflc
     2641 sgshqvqrdc qpsalncfve amsqcvppip irpcvlkylg kthnlwfrst lmlehqafek
     2701 glslqikpkq taefyeqesi tppqqeilds laelysllqe edmwaglwqk rckysetata
     2761 iayeqhgffe qaqesyekam dkakkehers naspaifpey qlwedhwirc skelnqweal
     2821 teygqskghi npylvlecaw rvsnwtamke alvqvevscp kemawkvnmy rgylaichpe
     2881 eqqlsfierl vemasslair ewrrlphvvs hvhtpllqaa qqiielqeaa qinaglqpsn
     2941 lgrnnslhdm ktvvktwrnr lpivsddlsh wssvfmwrqh hyqgkpawsg mpppsivtay
     3001 enssqhdpss nnamlgvhas asaiiqygki arkqglvnva ldilsrihti ptvpivdcfq
     3061 kirqqvkcyl qlagvmgkne cmqglevies tnlkyftkem taefyalkgm flaqinksee
     3121 ankafsaavq mhdvlvkawa mwgdylenif vkerqlhlgv saitcylhac rhqnesksrk
     3181 ylakvlwlls fdddkntlad avdkycigvp piqwlawipq lltclvgseg klllnlisqv
     3241 grvypqavyf pirtlyltlk ieqreryksd pgpiratapm wrcsrimhmq relhptllss
     3301 legivdqmvw frenwheevl rqlqqglakc ysvafeksga vsdakitpht lnfvkklvst
     3361 fgvglenvsn vstmfssaas eslarraqat aqdpvfqklk gqfttdfdfs vpgsmklhnl
     3421 isklkkwiki leaktkqlpk fflieekcrf lsnfsaqtae veipgeflmp kpthyyikia
     3481 rfmprveivq khntaarrly irghngkiyp ylvmndaclt esrreervlq llrllnpcle
     3541 krkettkrhl fftvprvvav spqmrlvedn psslslveiy kqrcakkgie hdnpisryyd
     3601 rlatvqargt qashqvlrdi lkevqsnmvp rsmlkewalh tfpnatdywt frkmftiqla
     3661 ligfaefvlh lnrlnpemlq iaqdtgklnv ayfrfdinda tgdldanrpv pfrltpnise
     3721 flttigvsgp ltasmiavar cfaqpnfkvd gilktvlrde iiawhkktqe dtssplsaag
     3781 qpenmdsqql vslvqkavta ivtrlhnlaq feggeskvnt lvaaansldn lcrmdpawhp
     3841 wl
//
LOCUS       XP_061009665            3831 aa            linear   MAM 02-DEC-2023
DEFINITION  transformation/transcription domain-associated protein isoform X5
            [Dama dama].
ACCESSION   XP_061009665
VERSION     XP_061009665.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153682.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3831
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3831
                     /product="transformation/transcription domain-associated
                     protein isoform X5"
                     /calculated_mol_wt=433877
     Region          276..882
                     /region_name="Tra1_central"
                     /note="Tra1 HEAT repeat central region; pfam20175"
                     /db_xref="CDD:466326"
     Region          894..2665
                     /region_name="Tra1_ring"
                     /note="Tra1 HEAT repeat ring region; pfam20206"
                     /db_xref="CDD:466357"
     Region          2834..3176
                     /region_name="FAT"
                     /note="FAT domain; pfam02259"
                     /db_xref="CDD:396714"
     Region          3468..3755
                     /region_name="PIKK_TRRAP"
                     /note="Pseudokinase domain of TRansformation/tRanscription
                     domain-Associated Protein; cd05163"
                     /db_xref="CDD:270707"
     Region          3804..3831
                     /region_name="FATC"
                     /note="FATC domain; pfam02260"
                     /db_xref="CDD:460514"
     CDS             1..3831
                     /gene="TRRAP"
                     /coded_by="XM_061153682.1:132..11627"
                     /db_xref="GeneID:133063825"
ORIGIN      
        1 mafvatqgat vvdqttlmkk ylqfvaaltd vntpdetklk mmqevsenfe nvtsspqyst
       61 flehiiprfl tflqdgevqf lqekpaqqlr klvleiihri ptnehlrpht knvlsvmfrf
      121 leteneenvl iclriiielh kqfrppitqe ihhfldfvkq iykelpkvvn ryfenpqvip
      181 entvpppemv gmvttiavkv nperddsetr ahsiiprgsl slkvlaelpi ivvlmyqlyk
      241 lnihnvvaef vplimntiai qvsaqarqhk lynkelyadf iaaqiktlsf layiiriyqe
      301 lvtkysqqmv kgmlqllsnc paetahlrke lliaakhilt telrnqfipc mdklfdesil
      361 igsgytaret lrplaystla dlvhhvrqhl plsdlslavq lfakniddes lpssiqtmsc
      421 klllnlvdci rskseqesgn grdvlmrmle vfvlkfhtia ryqlsaifkk ckpqselgav
      481 eaalpgvpat paapgpapsp apvpapappp pppptpatpv tpapvppfek qgekdkedkq
      541 tfqvtdcrsl vktlvcgvkt itwgitscka pgeaqfipnk qlqpketqiy iklvkyamqa
      601 ldiyqvqiag ngqtyirvan cqtvrmkeek evlehfagvf tmmnpltfke ifqttvpymv
      661 erisknyalq ivansflanp ttsalfatil veylldrlpe mgsnvelsnl ylklfklvfg
      721 svslfaaene qmlkphlhki vnssmelaqt akepynyfll lralfrsigg gshdllyqef
      781 lpllpnllqg lnmlqsglhk qhmkdlfvel cltvpvrlss llpylpmlmd plvsalngsq
      841 tlvsqglrtl elcvdnlqpd flydhiqpvr aelmqalwrt lrnpadsish vayrvlgkfg
      901 gsnrkmlkes qkllyvvtev qgpsvtvefs dckaslqlpm ekaietaldc lksantepyy
      961 rrqawevikc flvammsled nkhalyqlla hpnftektip nviishryka qdtparktfe
     1021 qaltgafmsa vikdlrpsal pfvaslirhy tmvavaqqcg pfllpcyqgg sqpstamfhs
     1081 eengskgmdp lvlidaiaic mayeekelck igevalavif dvasiilgsk eracqlplfs
     1141 yiverlcacc yeqawyaklg gvvsikflme rlpltwvlqn qqtflkallf vmmdltgevs
     1201 ngavamaktt leqllmrcat plkdeeraee ivaaqeksfh hvthdlvrev tspnstvrkq
     1261 amhslqvlaq vtgksvtvim ephkevlqdm vppkkhllrh qpanaqiglm egntfcttlq
     1321 prlftmdlnv vehkvfytel lnlceaedsa ltklpcyksl pslvplriaa lnalaacnyl
     1381 pqsrekiiaa lfkalnstns elqeageacm rkflegatie vdqihthmrp llmmlgdyrs
     1441 ltlnvvnrlt svtrlfpnsf ndkfcdqmmq hlrkwmevvv lthkggqrsd gnemkicsai
     1501 inlfhlipaa pqtlvkplle vvmkteraml ieagspfrep likfltrhps qtvelfmmea
     1561 tlndpqwsrm fmsflkhkda rplrdvlaan pnrfitlllp ggtqtavrpg spststlrld
     1621 lqfqavkiis iivknedswl asqhslvsql rrvwvsetfq erhrkenmaa tnwkepklla
     1681 ycllnyckkn ygdiellfql lraftgrflc nmtflkeyme eeipknynia qkralffrfv
     1741 dfndpnfgde lkakvlqhil npaflysfek gegeqllgpp npegdnpesi tsvfitkvle
     1801 pekqadmlds lrihllqfat llvehaphhi hdnnknrnsk lrrlmtfawp cllskacvdp
     1861 ackysghlll ahiiakfaih kkivlqvfhs llkahamear aivrqamail tpavparmed
     1921 ghqmlthwtr kiiveeghtv pqlvhilhli vqhfkvyypv rhhlvqhmvs amqrlgftps
     1981 vtieqrrlav dlsevvikwe lqrikdqqpd sdmdpnssge gvtsvsssik rglsvdsaqe
     2041 vkrfrtatga isavfgrsqs lpgadsllak pidkqhtdtv vnflirvacq vndntsaags
     2101 pgevlsrrcv tllktalrpd mwakselklq wfdkllmsve qpnqvnygni ctglevlsfl
     2161 ltvlqppail ssfkplqrgv aacmtcgntk vlravhslls rlmslfptep stssvaskye
     2221 eleclyaavg kviyegltny ekatsanpsq lfgtlmilks acsnnpsyid rlisvfmrsl
     2281 qkmvrehlsp qaasgsteaa sgtselvmls lelvktrlav msmemrknfi qailtsliek
     2341 spdakilrsv vkiveewvkn nspmaanqtp tlreksillv kmmtyiekrf pedlelnaqf
     2401 ldlvnyvyrd etlsgselta klepaflsgl rcaqplirak ffevfdnsmk rrvyerllyv
     2461 tcsqnweamg nhfwikqcie lllavcekst pigtscqgam lpsitnvinl adshdraafa
     2521 mvthvkqepr erenseskee dveidielap gdqtstpktk elsekdignq lhmltnrhdk
     2581 fldtlrevkt gallgafvql chisttlaek twvqlfprlw kilsdrqqha lageispflc
     2641 sgshqvqrdc qpsalncfve amsqcvppip irpcvlkylg kthnlwfrst lmlehqafek
     2701 glslqikpkq taefyeqesi tppqqeilds laelysllqe edmwaglwqk rckysetata
     2761 iayeqhgffe qaqesyekam dkakkehers naspaifpey qlwedhwirc skelnqweal
     2821 teygqskghi npylvlecaw rvsnwtamke alvqvevscp kemawkvnmy rgylaichpe
     2881 eqqlsfierl vemasslair ewrrlphvvs hvhtpllqaa qqiielqeaa qinaglqpsn
     2941 lgrnnslhdm ktvvktwrnr lpivsddlsh wssvfmwrqh hyqaivtaye nssqhdpssn
     3001 namlgvhasa saiiqygkia rkqglvnval dilsrihtip tvpivdcfqk irqqvkcylq
     3061 lagvmgknec mqgleviest nlkyftkemt aefyalkgmf laqinkseea nkafsaavqm
     3121 hdvlvkawam wgdylenifv kerqlhlgvs aitcylhacr hqnesksrky lakvlwllsf
     3181 dddkntlada vdkycigvpp iqwlawipql ltclvgsegk lllnlisqvg rvypqavyfp
     3241 irtlyltlki eqreryksdp gpiratapmw rcsrimhmqr elhptllssl egivdqmvwf
     3301 renwheevlr qlqqglakcy svafeksgav sdakitphtl nfvkklvstf gvglenvsnv
     3361 stmfssaase slarraqata qdpvfqklkg qfttdfdfsv pgsmklhnli sklkkwikil
     3421 eaktkqlpkf flieekcrfl snfsaqtaev eipgeflmpk pthyyikiar fmprveivqk
     3481 hntaarrlyi rghngkiypy lvmndaclte srreervlql lrllnpclek rkettkrhlf
     3541 ftvprvvavs pqmrlvednp sslslveiyk qrcakkgieh dnpisryydr latvqargtq
     3601 ashqvlrdil kevqsnmvpr smlkewalht fpnatdywtf rkmftiqlal igfaefvlhl
     3661 nrlnpemlqi aqdtgklnva yfrfdindat gdldanrpvp frltpnisef lttigvsgpl
     3721 tasmiavarc faqpnfkvdg ilktvlrdei iawhkktqed tssplsaagq penmdsqqlv
     3781 slvqkavtai vtrlhnlaqf eggeskvntl vaaansldnl crmdpawhpw l
//
LOCUS       XP_061009666            3848 aa            linear   MAM 02-DEC-2023
DEFINITION  transformation/transcription domain-associated protein isoform X6
            [Dama dama].
ACCESSION   XP_061009666
VERSION     XP_061009666.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153683.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3848
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3848
                     /product="transformation/transcription domain-associated
                     protein isoform X6"
                     /calculated_mol_wt=435530
     Region          276..881
                     /region_name="Tra1_central"
                     /note="Tra1 HEAT repeat central region; pfam20175"
                     /db_xref="CDD:466326"
     Region          893..2664
                     /region_name="Tra1_ring"
                     /note="Tra1 HEAT repeat ring region; pfam20206"
                     /db_xref="CDD:466357"
     Region          2833..3175
                     /region_name="FAT"
                     /note="FAT domain; pfam02259"
                     /db_xref="CDD:396714"
     Region          3485..3772
                     /region_name="PIKK_TRRAP"
                     /note="Pseudokinase domain of TRansformation/tRanscription
                     domain-Associated Protein; cd05163"
                     /db_xref="CDD:270707"
     Region          3821..3848
                     /region_name="FATC"
                     /note="FATC domain; pfam02260"
                     /db_xref="CDD:460514"
     CDS             1..3848
                     /gene="TRRAP"
                     /coded_by="XM_061153683.1:132..11678"
                     /db_xref="GeneID:133063825"
ORIGIN      
        1 mafvatqgat vvdqttlmkk ylqfvaaltd vntpdetklk mmqevsenfe nvtsspqyst
       61 flehiiprfl tflqdgevqf lqekpaqqlr klvleiihri ptnehlrpht knvlsvmfrf
      121 leteneenvl iclriiielh kqfrppitqe ihhfldfvkq iykelpkvvn ryfenpqvip
      181 entvpppemv gmvttiavkv nperddsetr ahsiiprgsl slkvlaelpi ivvlmyqlyk
      241 lnihnvvaef vplimntiai qvsaqarqhk lynkelyadf iaaqiktlsf layiiriyqe
      301 lvtkysqqmv kgmlqllsnc paetahlrke lliaakhilt telrnqfipc mdklfdesil
      361 igsgytaret lrplaystla dlvhhvrqhl plsdlslavq lfakniddes lpssiqtmsc
      421 klllnlvdci rskseqesgn grdvlmrmle vfvlkfhtia ryqlsaifkk ckpqselgav
      481 eaalpgvpat paapgpapsp apvpapappp pppptpatpv tpapvppfek qgekdkedkq
      541 tfqvtdcrsl vktlvcgvkt itwgitscka pgaqfipnkq lqpketqiyi klvkyamqal
      601 diyqvqiagn gqtyirvanc qtvrmkeeke vlehfagvft mmnpltfkei fqttvpymve
      661 risknyalqi vansflanpt tsalfatilv eylldrlpem gsnvelsnly lklfklvfgs
      721 vslfaaeneq mlkphlhkiv nssmelaqta kepynyflll ralfrsiggg shdllyqefl
      781 pllpnllqgl nmlqsglhkq hmkdlfvelc ltvpvrlssl lpylpmlmdp lvsalngsqt
      841 lvsqglrtle lcvdnlqpdf lydhiqpvra elmqalwrtl rnpadsishv ayrvlgkfgg
      901 snrkmlkesq kllyvvtevq gpsvtvefsd ckaslqlpme kaietaldcl ksantepyyr
      961 rqawevikcf lvammsledn khalyqllah pnftektipn viishrykaq dtparktfeq
     1021 altgafmsav ikdlrpsalp fvaslirhyt mvavaqqcgp fllpcyqggs qpstamfhse
     1081 engskgmdpl vlidaiaicm ayeekelcki gevalavifd vasiilgske racqlplfsy
     1141 iverlcaccy eqawyaklgg vvsikflmer lpltwvlqnq qtflkallfv mmdltgevsn
     1201 gavamakttl eqllmrcatp lkdeeraeei vaaqeksfhh vthdlvrevt spnstvrkqa
     1261 mhslqvlaqv tgksvtvime phkevlqdmv ppkkhllrhq panaqiglme gntfcttlqp
     1321 rlftmdlnvv ehkvfytell nlceaedsal tklpcykslp slvplriaal nalaacnylp
     1381 qsrekiiaal fkalnstnse lqeageacmr kflegatiev dqihthmrpl lmmlgdyrsl
     1441 tlnvvnrlts vtrlfpnsfn dkfcdqmmqh lrkwmevvvl thkggqrsdg nemkicsaii
     1501 nlfhlipaap qtlvkpllev vmkteramli eagspfrepl ikfltrhpsq tvelfmmeat
     1561 lndpqwsrmf msflkhkdar plrdvlaanp nrfitlllpg gtqtavrpgs pststlrldl
     1621 qfqavkiisi ivknedswla sqhslvsqlr rvwvsetfqe rhrkenmaat nwkepkllay
     1681 cllnyckkny gdiellfqll raftgrflcn mtflkeymee eipknyniaq kralffrfvd
     1741 fndpnfgdel kakvlqhiln paflysfekg egeqllgppn pegdnpesit svfitkvlep
     1801 ekqadmldsl rihllqfatl lvehaphhih dnnknrnskl rrlmtfawpc llskacvdpa
     1861 ckysghllla hiiakfaihk kivlqvfhsl lkahameara ivrqamailt pavparmedg
     1921 hqmlthwtrk iiveeghtvp qlvhilhliv qhfkvyypvr hhlvqhmvsa mqrlgftpsv
     1981 tieqrrlavd lsevvikwel qrikdqqpds dmdpnssgeg vtsvsssikr glsvdsaqev
     2041 krfrtatgai savfgrsqsl pgadsllakp idkqhtdtvv nflirvacqv ndntsaagsp
     2101 gevlsrrcvt llktalrpdm wakselklqw fdkllmsveq pnqvnygnic tglevlsfll
     2161 tvlqppails sfkplqrgva acmtcgntkv lravhsllsr lmslfpteps tssvaskyee
     2221 leclyaavgk viyegltnye katsanpsql fgtlmilksa csnnpsyidr lisvfmrslq
     2281 kmvrehlspq aasgsteaas gtselvmlsl elvktrlavm smemrknfiq ailtslieks
     2341 pdakilrsvv kiveewvknn spmaanqtpt lreksillvk mmtyiekrfp edlelnaqfl
     2401 dlvnyvyrde tlsgseltak lepaflsglr caqplirakf fevfdnsmkr rvyerllyvt
     2461 csqnweamgn hfwikqciel llavcekstp igtscqgaml psitnvinla dshdraafam
     2521 vthvkqepre renseskeed veidielapg dqtstpktke lsekdignql hmltnrhdkf
     2581 ldtlrevktg allgafvqlc histtlaekt wvqlfprlwk ilsdrqqhal ageispflcs
     2641 gshqvqrdcq psalncfvea msqcvppipi rpcvlkylgk thnlwfrstl mlehqafekg
     2701 lslqikpkqt aefyeqesit ppqqeildsl aelysllqee dmwaglwqkr ckysetatai
     2761 ayeqhgffeq aqesyekamd kakkehersn aspaifpeyq lwedhwircs kelnqwealt
     2821 eygqskghin pylvlecawr vsnwtamkea lvqvevscpk emawkvnmyr gylaichpee
     2881 qqlsfierlv emasslaire wrrlphvvsh vhtpllqaaq qiielqeaaq inaglqpsnl
     2941 grnnslhdmk tvvktwrnrl pivsddlshw ssvfmwrqhh yqaivtayen ssqhdpssnn
     3001 amlgvhasas aiiqygkiar kqglvnvald ilsrihtipt vpivdcfqki rqqvkcylql
     3061 agvmgknecm qgleviestn lkyftkemta efyalkgmfl aqinkseean kafsaavqmh
     3121 dvlvkawamw gdylenifvk erqlhlgvsa itcylhacrh qnesksrkyl akvlwllsfd
     3181 ddkntladav dkycigvppi qwlawipqll tclvgsegkl llnlisqvgr vypqavyfpi
     3241 rtlyltlkie qreryksdsg qqqpssvgnq shsasdpgpi ratapmwrcs rimhmqrelh
     3301 ptllsslegi vdqmvwfren wheevlrqlq qglakcysva feksgavsda kitphtlnfv
     3361 kklvstfgvg lenvsnvstm fssaasesla rraqataqdp vfqklkgqft tdfdfsvpgs
     3421 mklhnliskl kkwikileak tkqlpkffli eekcrflsnf saqtaeveip geflmpkpth
     3481 yyikiarfmp rveivqkhnt aarrlyirgh ngkiypylvm ndacltesrr eervlqllrl
     3541 lnpclekrke ttkrhlfftv prvvavspqm rlvednpssl slveiykqrc akkgiehdnp
     3601 isryydrlat vqargtqash qvlrdilkev qsnmvprsml kewalhtfpn atdywtfrkm
     3661 ftiqlaligf aefvlhlnrl npemlqiaqd tgklnvayfr fdindatgdl danrpvpfrl
     3721 tpnisefltt igvsgpltas miavarcfaq pnfkvdgilk tvlrdeiiaw hkktqedtss
     3781 plsaagqpen mdsqqlvslv qkavtaivtr lhnlaqfegg eskvntlvaa ansldnlcrm
     3841 dpawhpwl
//
LOCUS       XP_061009667            2959 aa            linear   MAM 02-DEC-2023
DEFINITION  trinucleotide repeat-containing gene 18 protein isoform X1 [Dama
            dama].
ACCESSION   XP_061009667
VERSION     XP_061009667.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153684.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2959
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2959
                     /product="trinucleotide repeat-containing gene 18 protein
                     isoform X1"
                     /calculated_mol_wt=312753
     Region          <1085..1438
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          2230..2296
                     /region_name="Tudor_TNRC18"
                     /note="Tudor domain found in trinucleotide
                     repeat-containing gene 18 protein (TNRC18) and similar
                     proteins; cd20469"
                     /db_xref="CDD:410540"
     Site            order(2244,2250,2252,2274,2276,2278)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410540"
     Region          2807..2951
                     /region_name="BAH_BAHCC1"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in mammalian BAHCC1 and similar proteins. BAHCC1 stands
                     for BAH domain and coiled-coil containing 1. BAH domains
                     are found in a variety of proteins playing roles in
                     transcriptional silencing and the...; cd04714"
                     /db_xref="CDD:240065"
     CDS             1..2959
                     /gene="TNRC18"
                     /coded_by="XM_061153684.1:19..8898"
                     /db_xref="GeneID:133063827"
ORIGIN      
        1 mdgrdfgppr svhgppppll sglamdshrv gaatagrlpa sglpgplppg kymaglnlhp
       61 hpgeaflgsf vaggmgpaas shgspvplps dlsfrsptps nlpmvqlwat hahegfshlp
      121 sglypsylhl nhleppssgs pllsqlgqps ifdtqkdgfy lpapgapgal hshtpssrts
      181 ggghssgast kgssregpak ersgrsgepp plfgkkdpra reeaagprgv vdltqearae
      241 grqdrgpprl lerlspflad pglprapgta aaesksknpp pplplslcng sgdlglpslv
      301 aegargtkdi arqdesarlr raeallpgpc pcpsplpppp pppskgppap paasgafaap
      361 qptptgvyti fpaaaarepg rehrvvaptf vpsveafder pgpiqiasqa rdararerev
      421 grpgvlqgpp gsprppldrp eslrekssvi rslkrpppte apparaaras pdsraylpak
      481 ellkpeaeqr pceralrgpa aatasqqaak lfglepgrpp ppagpehkwk pfelgnfatt
      541 qmavlaaqhh hasraeeeaa aaaskkayld pgatlpraav tcarpgadih aaahgpgeas
      601 amqslikysg sfareavtvr pggcgkkspf gglgtmkpep aptaapraqt rlphpggpva
      661 sggrqlkrdp erpesakafg regsgaqgea evrhppvgia vavarqkdsg gsgrlapgla
      721 dqerslslsn vkghgraded cgddrarhre erllgarldr dqekllresk eladlarlhp
      781 tscaanglnp nlmvtggpal agsgrwsadp aahlathpwl prsgstsmwl aghpyglgpp
      841 slhqgmapaf ppglggslps ayqfvrdpqs gqlvvipsdh lphfaelmer aavpplwpal
      901 yppgraslhh aqqlqlfsqq hflrqqelly lqqqaaqale lqrsaqlvqe rlkaqeqrve
      961 meekvskrsl eaagkaglaa agpgllprkp pglstgptga ygkamsppps praspvaalk
     1021 akviqkledv skppayaypa tpsshpsspp pasppptpgv arkeeapenv vekkdlelek
     1081 eapspfqalf sdiparypfq alpphygrpy pfllqptaaa dadglapdvp lpadgperla
     1141 lspedkplrl spskvpeplr eipdeeplve revkaevedm deepaqlasl gspltlpped
     1201 alaapspagg lleaqalsag gqgpeeppgc pdfaegaegv dspgrtesca aapdlgprlt
     1261 peplveakee pvevpvdvpv avplaeavpg eedlaqaapv epqpslelpd cdmpvgegec
     1321 psleapeaga vpggacflee agseeflpsl edplagmnal aaaaelpqar plpspgtgtp
     1381 aletleaaqs lvleqsflhg itllseiael elekrsqeaa gaerglpvrp slesllaass
     1441 hvlkevldgp fvdplknlrl prelnpnkky swmqkkderm yamksslesm dameldfrmr
     1501 laevqrqyke kqrelvklqr rrdsedrree phrslarrgp grprkrthal salspprkrg
     1561 ksrihsgkls skplltsddy elgagmrkrh kgpeedhdal ggagkargrn qpwdehetss
     1621 dfmsqlkikk kkmasdqeql askldkalsl tkqdklkspf kfsdgsggks kasggcgryl
     1681 tpydsllgkd rkalakglsl slkasregkh kraakarkme vgfkargqpk sthspfasev
     1741 ssysyntdse eeeeflkdew aaqgpssskl tpsllcgmva knskpaggpk ltkrglagar
     1801 tlkpkpaagr kqpfclllqe veprssfsds sedsfdqdes seeededdel eedeaaggyr
     1861 lgsreramsp gleesglgll arfaasalps ptvgpslsvv qleakqkark keerqslmgt
     1921 efeytdsese vkvrkrspag llrpkkglge pgpalaapsa rapgpnspdk aklatekgrk
     1981 arksrgpkep gleagpeasd ddlwtrrrse riflhdasap papssaapaa tkpgrcakag
     2041 lpsprkdagr akdrkdprkk kkgkeagsga slppprvpal paearaphts spastkrska
     2101 kakgkevkke nrgkggavsk lmesmaaeed fepnqdssfs edehlprgga aerpltpapr
     2161 sciidkdelk dglrvlipmd dkllyaghvq tlhspdiyrv vvegergnrp hiycleqllq
     2221 eaiidvrpas trylpqgtri aaywsqqyrc lypgtvvrgl lgleddgdli tvefddgdtg
     2281 riplshirll ppdykiqcae pspallvpsa krrsrktskd tgeskdgaap gseepgakar
     2341 grgrkpstka ksdraavlee ggstddvpst plalepintp gskksppepv dkraktpkar
     2401 pappqpspap stfascpape pfgelpapaa alaptplvtv pitipatrpk pkkaraaees
     2461 askgarrpge eaellvkldh egvtspkskk akealllree pkgllglggy apaagspepk
     2521 aarpkaadgd laqepavgla fedsgtaksp dkgqaeqdga eesesssgsg sssssdsgss
     2581 ssssetegee dgqgggrncs asssrassss ssssssssss ssssssssss ssssssssss
     2641 ssssssssss ssssssssss sssttddssc ssddeaapap aagpsappal pskapkqagk
     2701 arssahspgk kapapaaqap ppqptpplpp kaqagaksrp kkregvhlpt tkelakrqrl
     2761 psvenrpkia aflparqlwk wfgkptqrrg mkgkarklfy kaivrgkemi rigdcavfls
     2821 agrpnlpyig riqsmweswg snmvvrvkwf yhpeetspgk rlhegqpwdq ksgrslpasl
     2881 rassqrkdfm eralyqsshv dendvqtvsh kclvvgleqy eqmvktkkyq dseglyylag
     2941 tyepttgmif stdgvpvlc
//
LOCUS       XP_061009668            2958 aa            linear   MAM 02-DEC-2023
DEFINITION  trinucleotide repeat-containing gene 18 protein isoform X2 [Dama
            dama].
ACCESSION   XP_061009668
VERSION     XP_061009668.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153685.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2958
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2958
                     /product="trinucleotide repeat-containing gene 18 protein
                     isoform X2"
                     /calculated_mol_wt=312625
     Region          <1084..1437
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          2229..2295
                     /region_name="Tudor_TNRC18"
                     /note="Tudor domain found in trinucleotide
                     repeat-containing gene 18 protein (TNRC18) and similar
                     proteins; cd20469"
                     /db_xref="CDD:410540"
     Site            order(2243,2249,2251,2273,2275,2277)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410540"
     Region          2806..2950
                     /region_name="BAH_BAHCC1"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in mammalian BAHCC1 and similar proteins. BAHCC1 stands
                     for BAH domain and coiled-coil containing 1. BAH domains
                     are found in a variety of proteins playing roles in
                     transcriptional silencing and the...; cd04714"
                     /db_xref="CDD:240065"
     CDS             1..2958
                     /gene="TNRC18"
                     /coded_by="XM_061153685.1:20..8896"
                     /db_xref="GeneID:133063827"
ORIGIN      
        1 mdgrdfgppr svhgppppll sglamdshrv gaatagrlpa sglpgplppg kymaglnlhp
       61 hpgeaflgsf vaggmgpaas shgspvplps dlsfrsptps nlpmvqlwat hahegfshlp
      121 sglypsylhl nhleppssgs pllsqlgqps ifdtqkdgfy lpapgapgal hshtpssrts
      181 ggghssgast kgssregpak ersgrsgepp plfgkkdpra reeaagprgv vdltqearae
      241 grqdrgpprl lerlspflad pglprapgta aaesksknpp pplplslcng sgdlglpslv
      301 aegargtkdi arqdesarlr raeallpgpc pcpsplpppp pppskgppap paasgafaap
      361 qptptgvyti fpaaaarepg rehrvvaptf vpsveafder pgpiqiasqa rdararerev
      421 grpgvlqgpp gsprppldrp eslrekssvi rslkrpppte apparaaras pdsraylpak
      481 ellkpeaeqr pceralrgpa aatasqqaak lfglepgrpp ppagpehkwk pfelgnfatt
      541 qmavlaaqhh hasraeeeaa aaaskkayld pgatlpraav tcarpgadih aaahgpgeas
      601 amqslikysg sfareavtvr pggcgkkspf gglgtmkpep aptaapraqt rlphpggpva
      661 sggrqlkrdp erpesakafg regsgaqgea evrhppvgia vavarqkdsg gsgrlapgla
      721 dqerslslsn vkghgraded cgddrarhre erllgarldr dqekllresk eladlarlhp
      781 tscaanglnp nlmvtggpal agsgrwsadp aahlathpwl prsgstsmwl aghpyglgpp
      841 slhqgmapaf ppglggslps ayqfvrdpqs gqlvvipsdh lphfaelmer aavpplwpal
      901 yppgraslhh aqqlqlfsqq hflrqqelly lqqqaaqale lqrsaqlver lkaqeqrvem
      961 eekvskrsle aagkaglaaa gpgllprkpp glstgptgay gkamspppsp raspvaalka
     1021 kviqkledvs kppayaypat psshpssppp asppptpgva rkeeapenvv ekkdleleke
     1081 apspfqalfs diparypfqa lpphygrpyp fllqptaaad adglapdvpl padgperlal
     1141 spedkplrls pskvpeplre ipdeeplver evkaevedmd eepaqlaslg spltlppeda
     1201 laapspaggl leaqalsagg qgpeeppgcp dfaegaegvd spgrtescaa apdlgprltp
     1261 eplveakeep vevpvdvpva vplaeavpge edlaqaapve pqpslelpdc dmpvgegecp
     1321 sleapeagav pggacfleea gseeflpsle dplagmnala aaaelpqarp lpspgtgtpa
     1381 letleaaqsl vleqsflhgi tllseiaele lekrsqeaag aerglpvrps lesllaassh
     1441 vlkevldgpf vdplknlrlp relnpnkkys wmqkkdermy amksslesmd ameldfrmrl
     1501 aevqrqykek qrelvklqrr rdsedrreep hrslarrgpg rprkrthals alspprkrgk
     1561 srihsgklss kplltsddye lgagmrkrhk gpeedhdalg gagkargrnq pwdehetssd
     1621 fmsqlkikkk kmasdqeqla skldkalslt kqdklkspfk fsdgsggksk asggcgrylt
     1681 pydsllgkdr kalakglsls lkasregkhk raakarkmev gfkargqpks thspfasevs
     1741 sysyntdsee eeeflkdewa aqgpsssklt psllcgmvak nskpaggpkl tkrglagart
     1801 lkpkpaagrk qpfclllqev eprssfsdss edsfdqdess eeededdele edeaaggyrl
     1861 gsreramspg leesglglla rfaasalpsp tvgpslsvvq leakqkarkk eerqslmgte
     1921 feytdsesev kvrkrspagl lrpkkglgep gpalaapsar apgpnspdka klatekgrka
     1981 rksrgpkepg leagpeasdd dlwtrrrser iflhdasapp apssaapaat kpgrcakagl
     2041 psprkdagra kdrkdprkkk kgkeagsgas lppprvpalp aearaphtss pastkrskak
     2101 akgkevkken rgkggavskl mesmaaeedf epnqdssfse dehlprggaa erpltpaprs
     2161 ciidkdelkd glrvlipmdd kllyaghvqt lhspdiyrvv vegergnrph iycleqllqe
     2221 aiidvrpast rylpqgtria aywsqqyrcl ypgtvvrgll gleddgdlit vefddgdtgr
     2281 iplshirllp pdykiqcaep spallvpsak rrsrktskdt geskdgaapg seepgakarg
     2341 rgrkpstkak sdraavleeg gstddvpstp lalepintpg skksppepvd kraktpkarp
     2401 appqpspaps tfascpapep fgelpapaaa laptplvtvp itipatrpkp kkaraaeesa
     2461 skgarrpgee aellvkldhe gvtspkskka kealllreep kgllglggya paagspepka
     2521 arpkaadgdl aqepavglaf edsgtakspd kgqaeqdgae esesssgsgs ssssdsgsss
     2581 sssetegeed gqgggrncsa sssrasssss ssssssssss ssssssssss ssssssssss
     2641 ssssssssss ssssssssss ssttddsscs sddeaapapa agpsappalp skapkqagka
     2701 rssahspgkk apapaaqapp pqptpplppk aqagaksrpk kregvhlptt kelakrqrlp
     2761 svenrpkiaa flparqlwkw fgkptqrrgm kgkarklfyk aivrgkemir igdcavflsa
     2821 grpnlpyigr iqsmweswgs nmvvrvkwfy hpeetspgkr lhegqpwdqk sgrslpaslr
     2881 assqrkdfme ralyqsshvd endvqtvshk clvvgleqye qmvktkkyqd seglyylagt
     2941 yepttgmifs tdgvpvlc
//
LOCUS       XP_061009669            2916 aa            linear   MAM 02-DEC-2023
DEFINITION  trinucleotide repeat-containing gene 18 protein isoform X3 [Dama
            dama].
ACCESSION   XP_061009669
VERSION     XP_061009669.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153686.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2916
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2916
                     /product="trinucleotide repeat-containing gene 18 protein
                     isoform X3"
                     /calculated_mol_wt=307821
     Region          <1085..1438
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          2187..2253
                     /region_name="Tudor_TNRC18"
                     /note="Tudor domain found in trinucleotide
                     repeat-containing gene 18 protein (TNRC18) and similar
                     proteins; cd20469"
                     /db_xref="CDD:410540"
     Site            order(2201,2207,2209,2231,2233,2235)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410540"
     Region          2764..2908
                     /region_name="BAH_BAHCC1"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in mammalian BAHCC1 and similar proteins. BAHCC1 stands
                     for BAH domain and coiled-coil containing 1. BAH domains
                     are found in a variety of proteins playing roles in
                     transcriptional silencing and the...; cd04714"
                     /db_xref="CDD:240065"
     CDS             1..2916
                     /gene="TNRC18"
                     /coded_by="XM_061153686.1:19..8769"
                     /db_xref="GeneID:133063827"
ORIGIN      
        1 mdgrdfgppr svhgppppll sglamdshrv gaatagrlpa sglpgplppg kymaglnlhp
       61 hpgeaflgsf vaggmgpaas shgspvplps dlsfrsptps nlpmvqlwat hahegfshlp
      121 sglypsylhl nhleppssgs pllsqlgqps ifdtqkdgfy lpapgapgal hshtpssrts
      181 ggghssgast kgssregpak ersgrsgepp plfgkkdpra reeaagprgv vdltqearae
      241 grqdrgpprl lerlspflad pglprapgta aaesksknpp pplplslcng sgdlglpslv
      301 aegargtkdi arqdesarlr raeallpgpc pcpsplpppp pppskgppap paasgafaap
      361 qptptgvyti fpaaaarepg rehrvvaptf vpsveafder pgpiqiasqa rdararerev
      421 grpgvlqgpp gsprppldrp eslrekssvi rslkrpppte apparaaras pdsraylpak
      481 ellkpeaeqr pceralrgpa aatasqqaak lfglepgrpp ppagpehkwk pfelgnfatt
      541 qmavlaaqhh hasraeeeaa aaaskkayld pgatlpraav tcarpgadih aaahgpgeas
      601 amqslikysg sfareavtvr pggcgkkspf gglgtmkpep aptaapraqt rlphpggpva
      661 sggrqlkrdp erpesakafg regsgaqgea evrhppvgia vavarqkdsg gsgrlapgla
      721 dqerslslsn vkghgraded cgddrarhre erllgarldr dqekllresk eladlarlhp
      781 tscaanglnp nlmvtggpal agsgrwsadp aahlathpwl prsgstsmwl aghpyglgpp
      841 slhqgmapaf ppglggslps ayqfvrdpqs gqlvvipsdh lphfaelmer aavpplwpal
      901 yppgraslhh aqqlqlfsqq hflrqqelly lqqqaaqale lqrsaqlvqe rlkaqeqrve
      961 meekvskrsl eaagkaglaa agpgllprkp pglstgptga ygkamsppps praspvaalk
     1021 akviqkledv skppayaypa tpsshpsspp pasppptpgv arkeeapenv vekkdlelek
     1081 eapspfqalf sdiparypfq alpphygrpy pfllqptaaa dadglapdvp lpadgperla
     1141 lspedkplrl spskvpeplr eipdeeplve revkaevedm deepaqlasl gspltlpped
     1201 alaapspagg lleaqalsag gqgpeeppgc pdfaegaegv dspgrtesca aapdlgprlt
     1261 peplveakee pvevpvdvpv avplaeavpg eedlaqaapv epqpslelpd cdmpvgegec
     1321 psleapeaga vpggacflee agseeflpsl edplagmnal aaaaelpqar plpspgtgtp
     1381 aletleaaqs lvleqsflhg itllseiael elekrsqeaa gaerglpvrp slesllaass
     1441 hvlkevldgp fvdplknlrl prelnpnkky swmqkkderm yamksslesm dameldfrmr
     1501 laevqrqyke kqrelvklqr rrdselsskp lltsddyelg agmrkrhkgp eedhdalgga
     1561 gkargrnqpw dehetssdfm sqlkikkkkm asdqeqlask ldkalsltkq dklkspfkfs
     1621 dgsggkskas ggcgryltpy dsllgkdrka lakglslslk asregkhkra akarkmevgf
     1681 kargqpksth spfasevssy syntdseeee eflkdewaaq gpssskltps llcgmvakns
     1741 kpaggpkltk rglagartlk pkpaagrkqp fclllqevep rssfsdssed sfdqdessee
     1801 ededdeleed eaaggyrlgs reramspgle esglgllarf aasalpsptv gpslsvvqle
     1861 akqkarkkee rqslmgtefe ytdsesevkv rkrspagllr pkkglgepgp alaapsarap
     1921 gpnspdkakl atekgrkark srgpkepgle agpeasdddl wtrrrserif lhdasappap
     1981 ssaapaatkp grcakaglps prkdagrakd rkdprkkkkg keagsgaslp pprvpalpae
     2041 araphtsspa stkrskakak gkevkkenrg kggavsklme smaaeedfep nqdssfsede
     2101 hlprggaaer pltpaprsci idkdelkdgl rvlipmddkl lyaghvqtlh spdiyrvvve
     2161 gergnrphiy cleqllqeai idvrpastry lpqgtriaay wsqqyrclyp gtvvrgllgl
     2221 eddgdlitve fddgdtgrip lshirllppd ykiqcaepsp allvpsakrr srktskdtge
     2281 skdgaapgse epgakargrg rkpstkaksd raavleeggs tddvpstpla lepintpgsk
     2341 ksppepvdkr aktpkarpap pqpspapstf ascpapepfg elpapaaala ptplvtvpit
     2401 ipatrpkpkk araaeesask garrpgeeae llvkldhegv tspkskkake alllreepkg
     2461 llglggyapa agspepkaar pkaadgdlaq epavglafed sgtakspdkg qaeqdgaees
     2521 esssgsgsss ssdsgsssss setegeedgq gggrncsass srasssssss ssssssssss
     2581 ssssssssss ssssssssss ssssssssss ssssssssss ttddsscssd deaapapaag
     2641 psappalpsk apkqagkars sahspgkkap apaaqapppq ptpplppkaq agaksrpkkr
     2701 egvhlpttke lakrqrlpsv enrpkiaafl parqlwkwfg kptqrrgmkg karklfykai
     2761 vrgkemirig dcavflsagr pnlpyigriq smweswgsnm vvrvkwfyhp eetspgkrlh
     2821 egqpwdqksg rslpaslras sqrkdfmera lyqsshvden dvqtvshkcl vvgleqyeqm
     2881 vktkkyqdse glyylagtye pttgmifstd gvpvlc
//
LOCUS       XP_061009670            2909 aa            linear   MAM 02-DEC-2023
DEFINITION  trinucleotide repeat-containing gene 18 protein isoform X4 [Dama
            dama].
ACCESSION   XP_061009670
VERSION     XP_061009670.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153687.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2909
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2909
                     /product="trinucleotide repeat-containing gene 18 protein
                     isoform X4"
                     /calculated_mol_wt=307645
     Region          <1035..1388
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          2180..2246
                     /region_name="Tudor_TNRC18"
                     /note="Tudor domain found in trinucleotide
                     repeat-containing gene 18 protein (TNRC18) and similar
                     proteins; cd20469"
                     /db_xref="CDD:410540"
     Site            order(2194,2200,2202,2224,2226,2228)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410540"
     Region          2757..2901
                     /region_name="BAH_BAHCC1"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in mammalian BAHCC1 and similar proteins. BAHCC1 stands
                     for BAH domain and coiled-coil containing 1. BAH domains
                     are found in a variety of proteins playing roles in
                     transcriptional silencing and the...; cd04714"
                     /db_xref="CDD:240065"
     CDS             1..2909
                     /gene="TNRC18"
                     /coded_by="XM_061153687.1:85..8814"
                     /db_xref="GeneID:133063827"
ORIGIN      
        1 malgpeglal esgeaflgsf vaggmgpaas shgspvplps dlsfrsptps nlpmvqlwat
       61 hahegfshlp sglypsylhl nhleppssgs pllsqlgqps ifdtqkdgfy lpapgapgal
      121 hshtpssrts ggghssgast kgssregpak ersgrsgepp plfgkkdpra reeaagprgv
      181 vdltqearae grqdrgpprl lerlspflad pglprapgta aaesksknpp pplplslcng
      241 sgdlglpslv aegargtkdi arqdesarlr raeallpgpc pcpsplpppp pppskgppap
      301 paasgafaap qptptgvyti fpaaaarepg rehrvvaptf vpsveafder pgpiqiasqa
      361 rdararerev grpgvlqgpp gsprppldrp eslrekssvi rslkrpppte apparaaras
      421 pdsraylpak ellkpeaeqr pceralrgpa aatasqqaak lfglepgrpp ppagpehkwk
      481 pfelgnfatt qmavlaaqhh hasraeeeaa aaaskkayld pgatlpraav tcarpgadih
      541 aaahgpgeas amqslikysg sfareavtvr pggcgkkspf gglgtmkpep aptaapraqt
      601 rlphpggpva sggrqlkrdp erpesakafg regsgaqgea evrhppvgia vavarqkdsg
      661 gsgrlapgla dqerslslsn vkghgraded cgddrarhre erllgarldr dqekllresk
      721 eladlarlhp tscaanglnp nlmvtggpal agsgrwsadp aahlathpwl prsgstsmwl
      781 aghpyglgpp slhqgmapaf ppglggslps ayqfvrdpqs gqlvvipsdh lphfaelmer
      841 aavpplwpal yppgraslhh aqqlqlfsqq hflrqqelly lqqqaaqale lqrsaqlvqe
      901 rlkaqeqrve meekvskrsl eaagkaglaa agpgllprkp pglstgptga ygkamsppps
      961 praspvaalk akviqkledv skppayaypa tpsshpsspp pasppptpgv arkeeapenv
     1021 vekkdlelek eapspfqalf sdiparypfq alpphygrpy pfllqptaaa dadglapdvp
     1081 lpadgperla lspedkplrl spskvpeplr eipdeeplve revkaevedm deepaqlasl
     1141 gspltlpped alaapspagg lleaqalsag gqgpeeppgc pdfaegaegv dspgrtesca
     1201 aapdlgprlt peplveakee pvevpvdvpv avplaeavpg eedlaqaapv epqpslelpd
     1261 cdmpvgegec psleapeaga vpggacflee agseeflpsl edplagmnal aaaaelpqar
     1321 plpspgtgtp aletleaaqs lvleqsflhg itllseiael elekrsqeaa gaerglpvrp
     1381 slesllaass hvlkevldgp fvdplknlrl prelnpnkky swmqkkderm yamksslesm
     1441 dameldfrmr laevqrqyke kqrelvklqr rrdsedrree phrslarrgp grprkrthal
     1501 salspprkrg ksrihsgkls skplltsddy elgagmrkrh kgpeedhdal ggagkargrn
     1561 qpwdehetss dfmsqlkikk kkmasdqeql askldkalsl tkqdklkspf kfsdgsggks
     1621 kasggcgryl tpydsllgkd rkalakglsl slkasregkh kraakarkme vgfkargqpk
     1681 sthspfasev ssysyntdse eeeeflkdew aaqgpssskl tpsllcgmva knskpaggpk
     1741 ltkrglagar tlkpkpaagr kqpfclllqe veprssfsds sedsfdqdes seeededdel
     1801 eedeaaggyr lgsreramsp gleesglgll arfaasalps ptvgpslsvv qleakqkark
     1861 keerqslmgt efeytdsese vkvrkrspag llrpkkglge pgpalaapsa rapgpnspdk
     1921 aklatekgrk arksrgpkep gleagpeasd ddlwtrrrse riflhdasap papssaapaa
     1981 tkpgrcakag lpsprkdagr akdrkdprkk kkgkeagsga slppprvpal paearaphts
     2041 spastkrska kakgkevkke nrgkggavsk lmesmaaeed fepnqdssfs edehlprgga
     2101 aerpltpapr sciidkdelk dglrvlipmd dkllyaghvq tlhspdiyrv vvegergnrp
     2161 hiycleqllq eaiidvrpas trylpqgtri aaywsqqyrc lypgtvvrgl lgleddgdli
     2221 tvefddgdtg riplshirll ppdykiqcae pspallvpsa krrsrktskd tgeskdgaap
     2281 gseepgakar grgrkpstka ksdraavlee ggstddvpst plalepintp gskksppepv
     2341 dkraktpkar pappqpspap stfascpape pfgelpapaa alaptplvtv pitipatrpk
     2401 pkkaraaees askgarrpge eaellvkldh egvtspkskk akealllree pkgllglggy
     2461 apaagspepk aarpkaadgd laqepavgla fedsgtaksp dkgqaeqdga eesesssgsg
     2521 sssssdsgss ssssetegee dgqgggrncs asssrassss ssssssssss ssssssssss
     2581 ssssssssss ssssssssss ssssssssss sssttddssc ssddeaapap aagpsappal
     2641 pskapkqagk arssahspgk kapapaaqap ppqptpplpp kaqagaksrp kkregvhlpt
     2701 tkelakrqrl psvenrpkia aflparqlwk wfgkptqrrg mkgkarklfy kaivrgkemi
     2761 rigdcavfls agrpnlpyig riqsmweswg snmvvrvkwf yhpeetspgk rlhegqpwdq
     2821 ksgrslpasl rassqrkdfm eralyqsshv dendvqtvsh kclvvgleqy eqmvktkkyq
     2881 dseglyylag tyepttgmif stdgvpvlc
//
LOCUS       XP_061009671            2907 aa            linear   MAM 02-DEC-2023
DEFINITION  trinucleotide repeat-containing gene 18 protein isoform X5 [Dama
            dama].
ACCESSION   XP_061009671
VERSION     XP_061009671.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153688.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2907
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2907
                     /product="trinucleotide repeat-containing gene 18 protein
                     isoform X5"
                     /calculated_mol_wt=307469
     Region          <1033..1386
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          2178..2244
                     /region_name="Tudor_TNRC18"
                     /note="Tudor domain found in trinucleotide
                     repeat-containing gene 18 protein (TNRC18) and similar
                     proteins; cd20469"
                     /db_xref="CDD:410540"
     Site            order(2192,2198,2200,2222,2224,2226)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410540"
     Region          2755..2899
                     /region_name="BAH_BAHCC1"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in mammalian BAHCC1 and similar proteins. BAHCC1 stands
                     for BAH domain and coiled-coil containing 1. BAH domains
                     are found in a variety of proteins playing roles in
                     transcriptional silencing and the...; cd04714"
                     /db_xref="CDD:240065"
     CDS             1..2907
                     /gene="TNRC18"
                     /coded_by="XM_061153688.1:18..8741"
                     /db_xref="GeneID:133063827"
ORIGIN      
        1 mdgrdfgppr svhgppppll sglamdshrv gaatagrlpa sglpgplppg kymaglnlhp
       61 hpgfshlpsg lypsylhlnh leppssgspl lsqlgqpsif dtqkdgfylp apgapgalhs
      121 htpssrtsgg ghssgastkg ssregpaker sgrsgepppl fgkkdprare eaagprgvvd
      181 ltqearaegr qdrgpprlle rlspfladpg lprapgtaaa esksknpppp lplslcngsg
      241 dlglpslvae gargtkdiar qdesarlrra eallpgpcpc psplpppppp pskgppappa
      301 asgafaapqp tptgvytifp aaaarepgre hrvvaptfvp sveafderpg piqiasqard
      361 ararerevgr pgvlqgppgs prppldrpes lrekssvirs lkrpppteap paraaraspd
      421 sraylpakel lkpeaeqrpc eralrgpaaa tasqqaaklf glepgrpppp agpehkwkpf
      481 elgnfattqm avlaaqhhha sraeeeaaaa askkayldpg atlpraavtc arpgadihaa
      541 ahgpgeasam qslikysgsf areavtvrpg gcgkkspfgg lgtmkpepap taapraqtrl
      601 phpggpvasg grqlkrdper pesakafgre gsgaqgeaev rhppvgiava varqkdsggs
      661 grlapgladq erslslsnvk ghgradedcg ddrarhreer llgarldrdq ekllreskel
      721 adlarlhpts caanglnpnl mvtggpalag sgrwsadpaa hlathpwlpr sgstsmwlag
      781 hpyglgppsl hqgmapafpp glggslpsay qfvrdpqsgq lvvipsdhlp hfaelmeraa
      841 vpplwpalyp pgraslhhaq qlqlfsqqhf lrqqellylq qqaaqalelq rsaqlvqerl
      901 kaqeqrveme ekvskrslea agkaglaaag pgllprkppg lstgptgayg kamspppspr
      961 aspvaalkak viqkledvsk ppayaypatp sshpsspppa sppptpgvar keeapenvve
     1021 kkdlelekea pspfqalfsd iparypfqal pphygrpypf llqptaaada dglapdvplp
     1081 adgperlals pedkplrlsp skvpeplrei pdeeplvere vkaevedmde epaqlaslgs
     1141 pltlppedal aapspaggll eaqalsaggq gpeeppgcpd faegaegvds pgrtescaaa
     1201 pdlgprltpe plveakeepv evpvdvpvav plaeavpgee dlaqaapvep qpslelpdcd
     1261 mpvgegecps leapeagavp ggacfleeag seeflpsled plagmnalaa aaelpqarpl
     1321 pspgtgtpal etleaaqslv leqsflhgit llseiaelel ekrsqeaaga erglpvrpsl
     1381 esllaasshv lkevldgpfv dplknlrlpr elnpnkkysw mqkkdermya mksslesmda
     1441 meldfrmrla evqrqykekq relvklqrrr dsedrreeph rslarrgpgr prkrthalsa
     1501 lspprkrgks rihsgklssk plltsddyel gagmrkrhkg peedhdalgg agkargrnqp
     1561 wdehetssdf msqlkikkkk masdqeqlas kldkalsltk qdklkspfkf sdgsggkska
     1621 sggcgryltp ydsllgkdrk alakglslsl kasregkhkr aakarkmevg fkargqpkst
     1681 hspfasevss ysyntdseee eeflkdewaa qgpssskltp sllcgmvakn skpaggpklt
     1741 krglagartl kpkpaagrkq pfclllqeve prssfsdsse dsfdqdesse eededdelee
     1801 deaaggyrlg sreramspgl eesglgllar faasalpspt vgpslsvvql eakqkarkke
     1861 erqslmgtef eytdsesevk vrkrspagll rpkkglgepg palaapsara pgpnspdkak
     1921 latekgrkar ksrgpkepgl eagpeasddd lwtrrrseri flhdasappa pssaapaatk
     1981 pgrcakaglp sprkdagrak drkdprkkkk gkeagsgasl ppprvpalpa earaphtssp
     2041 astkrskaka kgkevkkenr gkggavsklm esmaaeedfe pnqdssfsed ehlprggaae
     2101 rpltpaprsc iidkdelkdg lrvlipmddk llyaghvqtl hspdiyrvvv egergnrphi
     2161 ycleqllqea iidvrpastr ylpqgtriaa ywsqqyrcly pgtvvrgllg leddgdlitv
     2221 efddgdtgri plshirllpp dykiqcaeps pallvpsakr rsrktskdtg eskdgaapgs
     2281 eepgakargr grkpstkaks draavleegg stddvpstpl alepintpgs kksppepvdk
     2341 raktpkarpa ppqpspapst fascpapepf gelpapaaal aptplvtvpi tipatrpkpk
     2401 karaaeesas kgarrpgeea ellvkldheg vtspkskkak ealllreepk gllglggyap
     2461 aagspepkaa rpkaadgdla qepavglafe dsgtakspdk gqaeqdgaee sesssgsgss
     2521 sssdsgssss ssetegeedg qgggrncsas ssrassssss ssssssssss ssssssssss
     2581 ssssssssss ssssssssss ssssssssss sttddsscss ddeaapapaa gpsappalps
     2641 kapkqagkar ssahspgkka papaaqappp qptpplppka qagaksrpkk regvhlpttk
     2701 elakrqrlps venrpkiaaf lparqlwkwf gkptqrrgmk gkarklfyka ivrgkemiri
     2761 gdcavflsag rpnlpyigri qsmweswgsn mvvrvkwfyh peetspgkrl hegqpwdqks
     2821 grslpaslra ssqrkdfmer alyqsshvde ndvqtvshkc lvvgleqyeq mvktkkyqds
     2881 eglyylagty epttgmifst dgvpvlc
//
LOCUS       XP_061009672            2885 aa            linear   MAM 02-DEC-2023
DEFINITION  trinucleotide repeat-containing gene 18 protein isoform X6 [Dama
            dama].
ACCESSION   XP_061009672
VERSION     XP_061009672.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153689.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2885
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2885
                     /product="trinucleotide repeat-containing gene 18 protein
                     isoform X6"
                     /calculated_mol_wt=305383
     Region          <1011..1364
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          2156..2222
                     /region_name="Tudor_TNRC18"
                     /note="Tudor domain found in trinucleotide
                     repeat-containing gene 18 protein (TNRC18) and similar
                     proteins; cd20469"
                     /db_xref="CDD:410540"
     Site            order(2170,2176,2178,2200,2202,2204)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410540"
     Region          2733..2877
                     /region_name="BAH_BAHCC1"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in mammalian BAHCC1 and similar proteins. BAHCC1 stands
                     for BAH domain and coiled-coil containing 1. BAH domains
                     are found in a variety of proteins playing roles in
                     transcriptional silencing and the...; cd04714"
                     /db_xref="CDD:240065"
     CDS             1..2885
                     /gene="TNRC18"
                     /coded_by="XM_061153689.1:148..8805"
                     /db_xref="GeneID:133063827"
ORIGIN      
        1 mgpaasshgs pvplpsdlsf rsptpsnlpm vqlwathahe gfshlpsgly psylhlnhle
       61 ppssgsplls qlgqpsifdt qkdgfylpap gapgalhsht pssrtsgggh ssgastkgss
      121 regpakersg rsgeppplfg kkdprareea agprgvvdlt qearaegrqd rgpprllerl
      181 spfladpglp rapgtaaaes ksknpppplp lslcngsgdl glpslvaega rgtkdiarqd
      241 esarlrraea llpgpcpcps plppppppps kgppappaas gafaapqptp tgvytifpaa
      301 aarepgrehr vvaptfvpsv eafderpgpi qiasqardar arerevgrpg vlqgppgspr
      361 ppldrpeslr ekssvirslk rpppteappa raaraspdsr aylpakellk peaeqrpcer
      421 alrgpaaata sqqaaklfgl epgrppppag pehkwkpfel gnfattqmav laaqhhhasr
      481 aeeeaaaaas kkayldpgat lpraavtcar pgadihaaah gpgeasamqs likysgsfar
      541 eavtvrpggc gkkspfgglg tmkpepapta apraqtrlph pggpvasggr qlkrdperpe
      601 sakafgregs gaqgeaevrh ppvgiavava rqkdsggsgr lapgladqer slslsnvkgh
      661 gradedcgdd rarhreerll garldrdqek llreskelad larlhptsca anglnpnlmv
      721 tggpalagsg rwsadpaahl athpwlprsg stsmwlaghp yglgppslhq gmapafppgl
      781 ggslpsayqf vrdpqsgqlv vipsdhlphf aelmeraavp plwpalyppg raslhhaqql
      841 qlfsqqhflr qqellylqqq aaqalelqrs aqlvqerlka qeqrvemeek vskrsleaag
      901 kaglaaagpg llprkppgls tgptgaygka mspppspras pvaalkakvi qkledvskpp
      961 ayaypatpss hpsspppasp pptpgvarke eapenvvekk dlelekeaps pfqalfsdip
     1021 arypfqalpp hygrpypfll qptaaadadg lapdvplpad gperlalspe dkplrlspsk
     1081 vpeplreipd eeplverevk aevedmdeep aqlaslgspl tlppedalaa pspaggllea
     1141 qalsaggqgp eeppgcpdfa egaegvdspg rtescaaapd lgprltpepl veakeepvev
     1201 pvdvpvavpl aeavpgeedl aqaapvepqp slelpdcdmp vgegecpsle apeagavpgg
     1261 acfleeagse eflpsledpl agmnalaaaa elpqarplps pgtgtpalet leaaqslvle
     1321 qsflhgitll seiaelelek rsqeaagaer glpvrpsles llaasshvlk evldgpfvdp
     1381 lknlrlprel npnkkyswmq kkdermyamk sslesmdame ldfrmrlaev qrqykekqre
     1441 lvklqrrrds edrreephrs larrgpgrpr krthalsals pprkrgksri hsgklsskpl
     1501 ltsddyelga gmrkrhkgpe edhdalggag kargrnqpwd ehetssdfms qlkikkkkma
     1561 sdqeqlaskl dkalsltkqd klkspfkfsd gsggkskasg gcgryltpyd sllgkdrkal
     1621 akglslslka sregkhkraa karkmevgfk argqpksths pfasevssys yntdseeeee
     1681 flkdewaaqg pssskltpsl lcgmvaknsk paggpkltkr glagartlkp kpaagrkqpf
     1741 clllqevepr ssfsdsseds fdqdesseee deddeleede aaggyrlgsr eramspglee
     1801 sglgllarfa asalpsptvg pslsvvqlea kqkarkkeer qslmgtefey tdsesevkvr
     1861 krspagllrp kkglgepgpa laapsarapg pnspdkakla tekgrkarks rgpkepglea
     1921 gpeasdddlw trrrserifl hdasappaps saapaatkpg rcakaglpsp rkdagrakdr
     1981 kdprkkkkgk eagsgaslpp prvpalpaea raphtsspas tkrskakakg kevkkenrgk
     2041 ggavsklmes maaeedfepn qdssfsedeh lprggaaerp ltpaprscii dkdelkdglr
     2101 vlipmddkll yaghvqtlhs pdiyrvvveg ergnrphiyc leqllqeaii dvrpastryl
     2161 pqgtriaayw sqqyrclypg tvvrgllgle ddgdlitvef ddgdtgripl shirllppdy
     2221 kiqcaepspa llvpsakrrs rktskdtges kdgaapgsee pgakargrgr kpstkaksdr
     2281 aavleeggst ddvpstplal epintpgskk sppepvdkra ktpkarpapp qpspapstfa
     2341 scpapepfge lpapaaalap tplvtvpiti patrpkpkka raaeesaskg arrpgeeael
     2401 lvkldhegvt spkskkakea lllreepkgl lglggyapaa gspepkaarp kaadgdlaqe
     2461 pavglafeds gtakspdkgq aeqdgaeese sssgsgssss sdsgssssss etegeedgqg
     2521 ggrncsasss rassssssss ssssssssss ssssssssss ssssssssss ssssssssss
     2581 ssssssssst tddsscssdd eaapapaagp sappalpska pkqagkarss ahspgkkapa
     2641 paaqapppqp tpplppkaqa gaksrpkkre gvhlpttkel akrqrlpsve nrpkiaaflp
     2701 arqlwkwfgk ptqrrgmkgk arklfykaiv rgkemirigd cavflsagrp nlpyigriqs
     2761 mweswgsnmv vrvkwfyhpe etspgkrlhe gqpwdqksgr slpaslrass qrkdfmeral
     2821 yqsshvdend vqtvshkclv vgleqyeqmv ktkkyqdseg lyylagtyep ttgmifstdg
     2881 vpvlc
//
LOCUS       XP_061009673            1489 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase LMTK2 isoform X1 [Dama dama].
ACCESSION   XP_061009673
VERSION     XP_061009673.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153690.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1489
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1489
                     /product="serine/threonine-protein kinase LMTK2 isoform
                     X1"
                     /calculated_mol_wt=161227
     Region          134..405
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(138..141,144,146,161,163,193,209..212,261,265..266,
                     268,278..279)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          <782..1205
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          1024..>1463
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..1489
                     /gene="LMTK2"
                     /coded_by="XM_061153690.1:295..4764"
                     /db_xref="GeneID:133063828"
ORIGIN      
        1 mpgpppppll lllllavgra gaaplpqtga geapvaeist sfvilsvgsl milivlianc
       61 vscckdpeid fkefednfdd eidftppaed tpsvqspaev ftlsvptvsl papsqfqpsv
      121 eglkpqvarh slnyiqeign gwfgkvllge iytgtsvarv ivkelkasas pkeqdtflkn
      181 gepyyilqhp nvlqcvgqcv eaipyllvfe fcdlgdlkay lrggepepar gdaqtmllqr
      241 laceiaaala amhkrhflhs dlalrncflt sdlnvkvgdy gigfsryked yietddkklf
      301 plrwtapelv tsfqdrllta dqtkysniws lgvtlwelfe naaqpyssls nldvlnqvir
      361 erdtklpkpq leqpysdrwy evlqfcwlsp dkrpaaedvh rlltylrmqs qrdpevdfeq
      421 qwnalkpnan srdaasnaaf pildhftrdr lgremeevlt vtetsqglsf eyvweaakhd
      481 hfdersrgpp dealsytsif fpteafessl adpgpgkqnd sgqdvplrap gvvpvfdahn
      541 lsvgsdyyiq leeksrsnld ldypptlltt emdnperlgd sasqcltlrs leleesstee
      601 dffqnsadpk dvsrpeeahs tkgpespfns lfndldksea lpshqkifdl melngvqadf
      661 kpptlssnld dpkesviach lekeqprklf dceplystdk lvhqdgfdql dieelsenfl
      721 flqeknllkd slsskahvnd lqtelrnagf peymletpsr ksvkaepkfa enkpdsslqe
      781 svsvqgresg aapkggsgva asprspqpqv pptsletqgp phevppgval kqgedrpmcp
      841 eggvredgac revnadstpa ppdtpaptgg dgspaltqqg egavsltqsd pslvqdtsas
      901 kvsignglpe lrqnlkhqlp leehsprglr eraweaveal gqlgrkdaaa eegglvsals
      961 sdsasqdsll edslsapvpt sepsvetpds ldsvdvheal lgslgahtpq klltpdkpad
     1021 sgyetenles pewtlhpape gapapdtasa regtpdrlpp kplivisdaa dghrgaeats
     1081 qtaapasqgs hrdsayfsdn dsepdrrseg algtsvsalg adqplpesvp pqspgpldsc
     1141 ldasssppdp scpdlqnsrh lesreaaepa pthtlppdde agspsslqns elssgddlea
     1201 peeppctlts tgtntdella lthaplrcgg pvaptaekpl cghsegpklk epdvegkylg
     1261 klgvsgmldl aedgmdadee densedsded lraftlhsls sesedeaehp vpvvlsredg
     1321 rclrsllkpa dpppgwrrer kavtffddvt vylfdqetpt kelghcggaa rspepsspap
     1381 aagsphlsrg lnsesstdee gggfewdddf spdpflsrtt shllsskpal qnskyfsppp
     1441 prsaepswph aapysrfsit pasiasfslt hltdsdmeqg gssedgekd
//
LOCUS       XP_061009674            1487 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase LMTK2 isoform X2 [Dama dama].
ACCESSION   XP_061009674
VERSION     XP_061009674.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153691.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1487
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1487
                     /product="serine/threonine-protein kinase LMTK2 isoform
                     X2"
                     /calculated_mol_wt=161099
     Region          132..403
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(136..139,142,144,159,161,191,207..210,259,263..264,
                     266,276..277)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          <780..1203
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          1022..>1461
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..1487
                     /gene="LMTK2"
                     /coded_by="XM_061153691.1:295..4758"
                     /db_xref="GeneID:133063828"
ORIGIN      
        1 mpgpppppll lllllavgra gaaplpqtge apvaeistsf vilsvgslmi livliancvs
       61 cckdpeidfk efednfddei dftppaedtp svqspaevft lsvptvslpa psqfqpsveg
      121 lkpqvarhsl nyiqeigngw fgkvllgeiy tgtsvarviv kelkasaspk eqdtflknge
      181 pyyilqhpnv lqcvgqcvea ipyllvfefc dlgdlkaylr ggepepargd aqtmllqrla
      241 ceiaaalaam hkrhflhsdl alrncfltsd lnvkvgdygi gfsrykedyi etddkklfpl
      301 rwtapelvts fqdrlltadq tkysniwslg vtlwelfena aqpysslsnl dvlnqvirer
      361 dtklpkpqle qpysdrwyev lqfcwlspdk rpaaedvhrl ltylrmqsqr dpevdfeqqw
      421 nalkpnansr daasnaafpi ldhftrdrlg remeevltvt etsqglsfey vweaakhdhf
      481 dersrgppde alsytsiffp teafesslad pgpgkqndsg qdvplrapgv vpvfdahnls
      541 vgsdyyiqle eksrsnldld ypptllttem dnperlgdsa sqcltlrsle leessteedf
      601 fqnsadpkdv srpeeahstk gpespfnslf ndldksealp shqkifdlme lngvqadfkp
      661 ptlssnlddp kesviachle keqprklfdc eplystdklv hqdgfdqldi eelsenflfl
      721 qeknllkdsl sskahvndlq telrnagfpe ymletpsrks vkaepkfaen kpdsslqesv
      781 svqgresgaa pkggsgvaas prspqpqvpp tsletqgpph evppgvalkq gedrpmcpeg
      841 gvredgacre vnadstpapp dtpaptggdg spaltqqgeg avsltqsdps lvqdtsaskv
      901 signglpelr qnlkhqlple ehsprglrer aweavealgq lgrkdaaaee gglvsalssd
      961 sasqdslled slsapvptse psvetpdsld svdvheallg slgahtpqkl ltpdkpadsg
     1021 yetenlespe wtlhpapega papdtasare gtpdrlppkp livisdaadg hrgaeatsqt
     1081 aapasqgshr dsayfsdnds epdrrsegal gtsvsalgad qplpesvppq spgpldscld
     1141 asssppdpsc pdlqnsrhle sreaaepapt htlppddeag spsslqnsel ssgddleape
     1201 eppctltstg tntdellalt haplrcggpv aptaekplcg hsegpklkep dvegkylgkl
     1261 gvsgmldlae dgmdadeede nsedsdedlr aftlhslsse sedeaehpvp vvlsredgrc
     1321 lrsllkpadp ppgwrrerka vtffddvtvy lfdqetptke lghcggaars pepsspapaa
     1381 gsphlsrgln sesstdeegg gfewdddfsp dpflsrttsh llsskpalqn skyfsppppr
     1441 saepswphaa pysrfsitpa siasfslthl tdsdmeqggs sedgekd
//
LOCUS       XP_061009675            1324 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin carboxyl-terminal hydrolase 42 [Dama dama].
ACCESSION   XP_061009675
VERSION     XP_061009675.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153692.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1324
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1324
                     /product="ubiquitin carboxyl-terminal hydrolase 42"
                     /calculated_mol_wt=145792
     Region          110..410
                     /region_name="Peptidase_C19E"
                     /note="A subfamily of Peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; cd02661"
                     /db_xref="CDD:239126"
     Site            order(115,120,371,388)
                     /site_type="active"
                     /db_xref="CDD:239126"
     Region          464..>927
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..1324
                     /gene="USP42"
                     /coded_by="XM_061153692.1:134..4108"
                     /db_xref="GeneID:133063829"
ORIGIN      
        1 mtivdkases sdpstyqnqp gsseavspgd mdagsaswga vsslndvsnh tlslgpvpga
       61 vvyssssvpe kskpspqkdq algdgiappq kvlfpsekic lkwqqthrvg aglqnlgntc
      121 fanaalqclt ytpplanyml shehsktcha egfcmmctmq ahitqalsnp gdvikpmfvi
      181 nemrriarhf rfgnqedahe flqytvdamq kaclngsnkl drhtqattlv cqifggylrs
      241 rvkclnckgv sdtfdpyldi tleikaaqsv nkaleqfvkp eqldgensyk cskckkmvpa
      301 skrftihrss nvltlslkrf anftggkiak dvkypeyldi rpymsqpnge piiyvlyavl
      361 vhtgfnchag hyfcyikasn glwyqmndsi vstsdirsvl sqqayvlfyi rshdvkngge
      421 lphsahspgq ssprpvisqr vvsskqaasg figpqlpshm mknpphlngt gplketpssp
      481 lsgpsgnssv srtgpvnasp svqnwsvnrp svipehpkkq kitisihnkl pvrqgqsqsn
      541 lhsnslehpn kpapsstitt ssaiqstssa ptppasskvp kqmapreacs rpvmngrsrl
      601 stgvlvpyga esseesdeea kglgqenglg ltesacspap daedgeasph elrepvalng
      661 atgpdsdpte nglpsdgapc pgqpalhseh pfpkanglpg klmpaplppl pedkiletfk
      721 lgskakglae etrtpgseer plehpeaele ashsppddar dnlesvssls skfqkalpps
      781 dpsikptkee vservlaepe eavpsvstfc npdkdalgdd qlpapcdpgn ltddqskpsp
      841 dvaamlperp qdlvateamg rlspgpsvps egdrepeplg hsgrdrgsda egpakstgvs
      901 tdevpspqld titenrpegp perssgerge dskagqkape pcpvqekvss lrkvdrghyr
      961 srrdrsssge raresrsrte vqhrrkrphr eherprperp rlepcapapq ppclsslars
     1021 ghhhsrsrga pdqewgryhh aegehaware kyypdrlrwe rcryhhdrap lypsreprdw
     1081 rpfhaereye ragpyggrpy kdhyrgrkgy eltakerdrh rfsspragma hvppphpaak
     1141 yahdrlgfga edgscdlagr fhehniksrk rrydslends hvekkawrsl qkdpleepkv
     1201 kkhkkskkkk kskdkhrdrd crhqqdsdls vahsdadlhr hkkkkkkkkr hsrksedfgr
     1261 dsephlpkaa scetvdhfrr aegtfpladg lplegaapfc ektkhlrmes revrcrlsec
     1321 gqgd
//
LOCUS       XP_061009676            1324 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin carboxyl-terminal hydrolase 42 [Dama dama].
ACCESSION   XP_061009676
VERSION     XP_061009676.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153693.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1324
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1324
                     /product="ubiquitin carboxyl-terminal hydrolase 42"
                     /calculated_mol_wt=145792
     Region          110..410
                     /region_name="Peptidase_C19E"
                     /note="A subfamily of Peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; cd02661"
                     /db_xref="CDD:239126"
     Site            order(115,120,371,388)
                     /site_type="active"
                     /db_xref="CDD:239126"
     Region          464..>927
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..1324
                     /gene="USP42"
                     /coded_by="XM_061153693.1:90..4064"
                     /db_xref="GeneID:133063829"
ORIGIN      
        1 mtivdkases sdpstyqnqp gsseavspgd mdagsaswga vsslndvsnh tlslgpvpga
       61 vvyssssvpe kskpspqkdq algdgiappq kvlfpsekic lkwqqthrvg aglqnlgntc
      121 fanaalqclt ytpplanyml shehsktcha egfcmmctmq ahitqalsnp gdvikpmfvi
      181 nemrriarhf rfgnqedahe flqytvdamq kaclngsnkl drhtqattlv cqifggylrs
      241 rvkclnckgv sdtfdpyldi tleikaaqsv nkaleqfvkp eqldgensyk cskckkmvpa
      301 skrftihrss nvltlslkrf anftggkiak dvkypeyldi rpymsqpnge piiyvlyavl
      361 vhtgfnchag hyfcyikasn glwyqmndsi vstsdirsvl sqqayvlfyi rshdvkngge
      421 lphsahspgq ssprpvisqr vvsskqaasg figpqlpshm mknpphlngt gplketpssp
      481 lsgpsgnssv srtgpvnasp svqnwsvnrp svipehpkkq kitisihnkl pvrqgqsqsn
      541 lhsnslehpn kpapsstitt ssaiqstssa ptppasskvp kqmapreacs rpvmngrsrl
      601 stgvlvpyga esseesdeea kglgqenglg ltesacspap daedgeasph elrepvalng
      661 atgpdsdpte nglpsdgapc pgqpalhseh pfpkanglpg klmpaplppl pedkiletfk
      721 lgskakglae etrtpgseer plehpeaele ashsppddar dnlesvssls skfqkalpps
      781 dpsikptkee vservlaepe eavpsvstfc npdkdalgdd qlpapcdpgn ltddqskpsp
      841 dvaamlperp qdlvateamg rlspgpsvps egdrepeplg hsgrdrgsda egpakstgvs
      901 tdevpspqld titenrpegp perssgerge dskagqkape pcpvqekvss lrkvdrghyr
      961 srrdrsssge raresrsrte vqhrrkrphr eherprperp rlepcapapq ppclsslars
     1021 ghhhsrsrga pdqewgryhh aegehaware kyypdrlrwe rcryhhdrap lypsreprdw
     1081 rpfhaereye ragpyggrpy kdhyrgrkgy eltakerdrh rfsspragma hvppphpaak
     1141 yahdrlgfga edgscdlagr fhehniksrk rrydslends hvekkawrsl qkdpleepkv
     1201 kkhkkskkkk kskdkhrdrd crhqqdsdls vahsdadlhr hkkkkkkkkr hsrksedfgr
     1261 dsephlpkaa scetvdhfrr aegtfpladg lplegaapfc ektkhlrmes revrcrlsec
     1321 gqgd
//
LOCUS       XP_061009677            1324 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin carboxyl-terminal hydrolase 42 [Dama dama].
ACCESSION   XP_061009677
VERSION     XP_061009677.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153694.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1324
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1324
                     /product="ubiquitin carboxyl-terminal hydrolase 42"
                     /calculated_mol_wt=145792
     Region          110..410
                     /region_name="Peptidase_C19E"
                     /note="A subfamily of Peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; cd02661"
                     /db_xref="CDD:239126"
     Site            order(115,120,371,388)
                     /site_type="active"
                     /db_xref="CDD:239126"
     Region          464..>927
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..1324
                     /gene="USP42"
                     /coded_by="XM_061153694.1:107..4081"
                     /db_xref="GeneID:133063829"
ORIGIN      
        1 mtivdkases sdpstyqnqp gsseavspgd mdagsaswga vsslndvsnh tlslgpvpga
       61 vvyssssvpe kskpspqkdq algdgiappq kvlfpsekic lkwqqthrvg aglqnlgntc
      121 fanaalqclt ytpplanyml shehsktcha egfcmmctmq ahitqalsnp gdvikpmfvi
      181 nemrriarhf rfgnqedahe flqytvdamq kaclngsnkl drhtqattlv cqifggylrs
      241 rvkclnckgv sdtfdpyldi tleikaaqsv nkaleqfvkp eqldgensyk cskckkmvpa
      301 skrftihrss nvltlslkrf anftggkiak dvkypeyldi rpymsqpnge piiyvlyavl
      361 vhtgfnchag hyfcyikasn glwyqmndsi vstsdirsvl sqqayvlfyi rshdvkngge
      421 lphsahspgq ssprpvisqr vvsskqaasg figpqlpshm mknpphlngt gplketpssp
      481 lsgpsgnssv srtgpvnasp svqnwsvnrp svipehpkkq kitisihnkl pvrqgqsqsn
      541 lhsnslehpn kpapsstitt ssaiqstssa ptppasskvp kqmapreacs rpvmngrsrl
      601 stgvlvpyga esseesdeea kglgqenglg ltesacspap daedgeasph elrepvalng
      661 atgpdsdpte nglpsdgapc pgqpalhseh pfpkanglpg klmpaplppl pedkiletfk
      721 lgskakglae etrtpgseer plehpeaele ashsppddar dnlesvssls skfqkalpps
      781 dpsikptkee vservlaepe eavpsvstfc npdkdalgdd qlpapcdpgn ltddqskpsp
      841 dvaamlperp qdlvateamg rlspgpsvps egdrepeplg hsgrdrgsda egpakstgvs
      901 tdevpspqld titenrpegp perssgerge dskagqkape pcpvqekvss lrkvdrghyr
      961 srrdrsssge raresrsrte vqhrrkrphr eherprperp rlepcapapq ppclsslars
     1021 ghhhsrsrga pdqewgryhh aegehaware kyypdrlrwe rcryhhdrap lypsreprdw
     1081 rpfhaereye ragpyggrpy kdhyrgrkgy eltakerdrh rfsspragma hvppphpaak
     1141 yahdrlgfga edgscdlagr fhehniksrk rrydslends hvekkawrsl qkdpleepkv
     1201 kkhkkskkkk kskdkhrdrd crhqqdsdls vahsdadlhr hkkkkkkkkr hsrksedfgr
     1261 dsephlpkaa scetvdhfrr aegtfpladg lplegaapfc ektkhlrmes revrcrlsec
     1321 gqgd
//
LOCUS       XP_061009678            1324 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin carboxyl-terminal hydrolase 42 [Dama dama].
ACCESSION   XP_061009678
VERSION     XP_061009678.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153695.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1324
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1324
                     /product="ubiquitin carboxyl-terminal hydrolase 42"
                     /calculated_mol_wt=145792
     Region          110..410
                     /region_name="Peptidase_C19E"
                     /note="A subfamily of Peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; cd02661"
                     /db_xref="CDD:239126"
     Site            order(115,120,371,388)
                     /site_type="active"
                     /db_xref="CDD:239126"
     Region          464..>927
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..1324
                     /gene="USP42"
                     /coded_by="XM_061153695.1:90..4064"
                     /db_xref="GeneID:133063829"
ORIGIN      
        1 mtivdkases sdpstyqnqp gsseavspgd mdagsaswga vsslndvsnh tlslgpvpga
       61 vvyssssvpe kskpspqkdq algdgiappq kvlfpsekic lkwqqthrvg aglqnlgntc
      121 fanaalqclt ytpplanyml shehsktcha egfcmmctmq ahitqalsnp gdvikpmfvi
      181 nemrriarhf rfgnqedahe flqytvdamq kaclngsnkl drhtqattlv cqifggylrs
      241 rvkclnckgv sdtfdpyldi tleikaaqsv nkaleqfvkp eqldgensyk cskckkmvpa
      301 skrftihrss nvltlslkrf anftggkiak dvkypeyldi rpymsqpnge piiyvlyavl
      361 vhtgfnchag hyfcyikasn glwyqmndsi vstsdirsvl sqqayvlfyi rshdvkngge
      421 lphsahspgq ssprpvisqr vvsskqaasg figpqlpshm mknpphlngt gplketpssp
      481 lsgpsgnssv srtgpvnasp svqnwsvnrp svipehpkkq kitisihnkl pvrqgqsqsn
      541 lhsnslehpn kpapsstitt ssaiqstssa ptppasskvp kqmapreacs rpvmngrsrl
      601 stgvlvpyga esseesdeea kglgqenglg ltesacspap daedgeasph elrepvalng
      661 atgpdsdpte nglpsdgapc pgqpalhseh pfpkanglpg klmpaplppl pedkiletfk
      721 lgskakglae etrtpgseer plehpeaele ashsppddar dnlesvssls skfqkalpps
      781 dpsikptkee vservlaepe eavpsvstfc npdkdalgdd qlpapcdpgn ltddqskpsp
      841 dvaamlperp qdlvateamg rlspgpsvps egdrepeplg hsgrdrgsda egpakstgvs
      901 tdevpspqld titenrpegp perssgerge dskagqkape pcpvqekvss lrkvdrghyr
      961 srrdrsssge raresrsrte vqhrrkrphr eherprperp rlepcapapq ppclsslars
     1021 ghhhsrsrga pdqewgryhh aegehaware kyypdrlrwe rcryhhdrap lypsreprdw
     1081 rpfhaereye ragpyggrpy kdhyrgrkgy eltakerdrh rfsspragma hvppphpaak
     1141 yahdrlgfga edgscdlagr fhehniksrk rrydslends hvekkawrsl qkdpleepkv
     1201 kkhkkskkkk kskdkhrdrd crhqqdsdls vahsdadlhr hkkkkkkkkr hsrksedfgr
     1261 dsephlpkaa scetvdhfrr aegtfpladg lplegaapfc ektkhlrmes revrcrlsec
     1321 gqgd
//
LOCUS       XP_061009679            1126 aa            linear   MAM 02-DEC-2023
DEFINITION  tectonin beta-propeller repeat-containing protein 1 isoform X1
            [Dama dama].
ACCESSION   XP_061009679
VERSION     XP_061009679.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153696.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1126
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1126
                     /product="tectonin beta-propeller repeat-containing
                     protein 1 isoform X1"
                     /calculated_mol_wt=123415
     Region          <58..232
                     /region_name="PHA03378"
                     /note="EBNA-3B; Provisional"
                     /db_xref="CDD:223065"
     Region          <242..385
                     /region_name="Tectonin"
                     /note="Tectonin domain; pfam19193"
                     /db_xref="CDD:465992"
     Region          555..675
                     /region_name="PH1_TECPR1"
                     /note="Tectonin beta-propeller repeat-containing protein 1
                     Pleckstrin homology (PH) domain, repeat 1; cd13300"
                     /db_xref="CDD:270112"
     Region          712..745
                     /region_name="TECPR"
                     /note="Beta propeller repeats in Physarum polycephalum
                     tectonins, Limulus lectin L-6 and animal hypothetical
                     proteins; smart00706"
                     /db_xref="CDD:214782"
     Region          768..828
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          839..872
                     /region_name="DysFC"
                     /note="Dysferlin domain, C-terminal region; smart00694"
                     /db_xref="CDD:128935"
     Region          <901..1045
                     /region_name="Tectonin"
                     /note="Tectonin domain; pfam19193"
                     /db_xref="CDD:465992"
     CDS             1..1126
                     /gene="TECPR1"
                     /coded_by="XM_061153696.1:236..3616"
                     /db_xref="GeneID:133063830"
ORIGIN      
        1 mgwrcprrig sgsrtgvdvc hrlpchlhkg qeveflraap avdpvqeiqv sghlgqdpfr
       61 grppaaarpl qrplcgrvgg hrrargppvr vgcdpagqgk eaadkgrpqs wcgrgcpcqp
      121 prvdkaglsp gppphvpsqq rglpeqvacr wgphstpscd pavlgtpwvl vlpeaselpr
      181 mpglglsppg twslgrcppw agrirlgsse rdsapfpltc gashtaespv wyrenvshhn
      241 pegsswslvd tpgeavqisc gphdllwvtl wegqalvreg inrnnpkgss wstvepptse
      301 ngilhvstgv cvvwavtkdr kvwfrrgins hnpcgtswie mfgemmmvnv glndqvwgig
      361 cvdralyfrq gvtqselsgk mwkaivagre gdrslsgssi sllsagcffg nevrssaesc
      421 gpgdtdaswe vpgpasspar lrgkeskkgp shatanfpea tdlssltllp lgleepesad
      481 chalwawvsg ggcaveahtt lkwftaqsgl spsaqtlsls itpaqtaawr kqifqqlter
      541 tkrelesfqh yeqaveqsvw vktgalqwwc dwkphkwvdv hvaleqltgn dgaqdsilfi
      601 yyvvheekky ihvflnevta lvpvfneakh sfalytpert rqrwpvrlaa ateqdmsdwl
      661 tllnlscces rrlhgrpspq aiwsvtckgd ifvsepgpdl eaperrlpcd qmfwrqiggh
      721 lrvveansrg vvwgigydht awvytggygg gcfqglasst snvftqwdvk cvrvyenqrw
      781 npvtgytsrg lptdrymwsd atglqectka stkppslqwt wvsdwfvdfs vpggtdpegw
      841 qyasdfpasy hkyktmkdfv rrrcwarkck lvtsgpwlev tsvalrdvsi ipespsaqgs
      901 gpnialwavs dkgdvlcrlg vselnpegfc wmhvgtdqpf tsvsigacyq vwavardgsa
      961 fyrssvspsr pngdcwyhip pppkqrlkqv saghtsvfal dengnlwyrq gvtpshpqgd
     1021 swehvsnnvr hvsvgpldqv wviadkvqgs hslsrgtvcr rtgvqslepk gqgwdygigg
     1081 gwdhlsiras atrapgsssp kpaskqngqp psvavapwet pspvcc
//
LOCUS       XP_061009680            1116 aa            linear   MAM 02-DEC-2023
DEFINITION  tectonin beta-propeller repeat-containing protein 1 isoform X2
            [Dama dama].
ACCESSION   XP_061009680
VERSION     XP_061009680.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153697.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1116
                     /product="tectonin beta-propeller repeat-containing
                     protein 1 isoform X2"
                     /calculated_mol_wt=124265
     Region          64..125
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          171..375
                     /region_name="Tectonin"
                     /note="Tectonin domain; pfam19193"
                     /db_xref="CDD:465992"
     Region          545..665
                     /region_name="PH1_TECPR1"
                     /note="Tectonin beta-propeller repeat-containing protein 1
                     Pleckstrin homology (PH) domain, repeat 1; cd13300"
                     /db_xref="CDD:270112"
     Region          702..735
                     /region_name="TECPR"
                     /note="Beta propeller repeats in Physarum polycephalum
                     tectonins, Limulus lectin L-6 and animal hypothetical
                     proteins; smart00706"
                     /db_xref="CDD:214782"
     Region          758..818
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          829..862
                     /region_name="DysFC"
                     /note="Dysferlin domain, C-terminal region; smart00694"
                     /db_xref="CDD:128935"
     Region          <891..1035
                     /region_name="Tectonin"
                     /note="Tectonin domain; pfam19193"
                     /db_xref="CDD:465992"
     CDS             1..1116
                     /gene="TECPR1"
                     /coded_by="XM_061153697.1:115..3465"
                     /db_xref="GeneID:133063830"
ORIGIN      
        1 mpssvlwavd lfgrvftlst agqhwepcrd aqlefkrvsa ardccwgiac dhqvyvlvga
       61 sdvpircqee ayenqrwnpv ggfceallps drwpcsdvsg lqhrpldgva lpsphwewes
      121 dwyvdenfgg eptekggwty aidfpatytr dkkwnscvrr rrwiryrryk sqdtwakips
      181 eddpqqlpdp fsdlsvggwe vtdepvgrls vwavtlqgkv wyrenvshhn pegsswslvd
      241 tpgeavqisc gphdllwvtl wegqalvreg inrnnpkgss wstvepptse ngilhvstgv
      301 cvvwavtkdr kvwfrrgins hnpcgtswie mfgemmmvnv glndqvwgig cvdralyfrq
      361 gvtqselsgk mwkaivagre gdrslsgssi sllsagcffg nevrssaesc gpgdtdaswe
      421 vpgpasspar lrgkeskkgp shatanfpea tdlssltllp lgleepesad chalwawvsg
      481 ggcaveahtt lkwftaqsgl spsaqtlsls itpaqtaawr kqifqqlter tkrelesfqh
      541 yeqaveqsvw vktgalqwwc dwkphkwvdv hvaleqltgn dgaqdsilfi yyvvheekky
      601 ihvflnevta lvpvfneakh sfalytpert rqrwpvrlaa ateqdmsdwl tllnlscces
      661 rrlhgrpspq aiwsvtckgd ifvsepgpdl eaperrlpcd qmfwrqiggh lrvveansrg
      721 vvwgigydht awvytggygg gcfqglasst snvftqwdvk cvrvyenqrw npvtgytsrg
      781 lptdrymwsd atglqectka stkppslqwt wvsdwfvdfs vpggtdpegw qyasdfpasy
      841 hkyktmkdfv rrrcwarkck lvtsgpwlev tsvalrdvsi ipespsaqgs gpnialwavs
      901 dkgdvlcrlg vselnpegfc wmhvgtdqpf tsvsigacyq vwavardgsa fyrssvspsr
      961 pngdcwyhip pppkqrlkqv saghtsvfal dengnlwyrq gvtpshpqgd swehvsnnvr
     1021 hvsvgpldqv wviadkvqgs hslsrgtvcr rtgvqslepk gqgwdygigg gwdhlsiras
     1081 atrapgsssp kpaskqngqp psvavapwet pspvcc
//
LOCUS       XP_061009681            1008 aa            linear   MAM 02-DEC-2023
DEFINITION  tectonin beta-propeller repeat-containing protein 1 isoform X3
            [Dama dama].
ACCESSION   XP_061009681
VERSION     XP_061009681.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153698.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1008
                     /product="tectonin beta-propeller repeat-containing
                     protein 1 isoform X3"
                     /calculated_mol_wt=111592
     Region          63..267
                     /region_name="Tectonin"
                     /note="Tectonin domain; pfam19193"
                     /db_xref="CDD:465992"
     Region          437..557
                     /region_name="PH1_TECPR1"
                     /note="Tectonin beta-propeller repeat-containing protein 1
                     Pleckstrin homology (PH) domain, repeat 1; cd13300"
                     /db_xref="CDD:270112"
     Region          594..627
                     /region_name="TECPR"
                     /note="Beta propeller repeats in Physarum polycephalum
                     tectonins, Limulus lectin L-6 and animal hypothetical
                     proteins; smart00706"
                     /db_xref="CDD:214782"
     Region          650..710
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          721..754
                     /region_name="DysFC"
                     /note="Dysferlin domain, C-terminal region; smart00694"
                     /db_xref="CDD:128935"
     Region          <783..927
                     /region_name="Tectonin"
                     /note="Tectonin domain; pfam19193"
                     /db_xref="CDD:465992"
     CDS             1..1008
                     /gene="TECPR1"
                     /coded_by="XM_061153698.1:198..3224"
                     /db_xref="GeneID:133063830"
ORIGIN      
        1 mqrcewapap aagwggaala algvgvglgw tyaidfpaty trdkkwnscv rrrrwiryrr
       61 yksqdtwaki pseddpqqlp dpfsdlsvgg wevtdepvgr lsvwavtlqg kvwyrenvsh
      121 hnpegsswsl vdtpgeavqi scgphdllwv tlwegqalvr eginrnnpkg sswstveppt
      181 sengilhvst gvcvvwavtk drkvwfrrgi nshnpcgtsw iemfgemmmv nvglndqvwg
      241 igcvdralyf rqgvtqsels gkmwkaivag regdrslsgs sisllsagcf fgnevrssae
      301 scgpgdtdas wevpgpassp arlrgkeskk gpshatanfp eatdlssltl lplgleepes
      361 adchalwawv sgggcaveah ttlkwftaqs glspsaqtls lsitpaqtaa wrkqifqqlt
      421 ertkrelesf qhyeqaveqs vwvktgalqw wcdwkphkwv dvhvaleqlt gndgaqdsil
      481 fiyyvvheek kyihvflnev talvpvfnea khsfalytpe rtrqrwpvrl aaateqdmsd
      541 wltllnlscc esrrlhgrps pqaiwsvtck gdifvsepgp dleaperrlp cdqmfwrqig
      601 ghlrvveans rgvvwgigyd htawvytggy gggcfqglas stsnvftqwd vkcvrvyenq
      661 rwnpvtgyts rglptdrymw sdatglqect kastkppslq wtwvsdwfvd fsvpggtdpe
      721 gwqyasdfpa syhkyktmkd fvrrrcwark cklvtsgpwl evtsvalrdv siipespsaq
      781 gsgpnialwa vsdkgdvlcr lgvselnpeg fcwmhvgtdq pftsvsigac yqvwavardg
      841 safyrssvsp srpngdcwyh ippppkqrlk qvsaghtsvf aldengnlwy rqgvtpshpq
      901 gdswehvsnn vrhvsvgpld qvwviadkvq gshslsrgtv crrtgvqsle pkgqgwdygi
      961 gggwdhlsir asatrapgss spkpaskqng qppsvavapw etpspvcc
//
LOCUS       XP_061009682             926 aa            linear   MAM 02-DEC-2023
DEFINITION  tectonin beta-propeller repeat-containing protein 1 isoform X4
            [Dama dama].
ACCESSION   XP_061009682
VERSION     XP_061009682.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153699.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..926
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..926
                     /product="tectonin beta-propeller repeat-containing
                     protein 1 isoform X4"
                     /calculated_mol_wt=101365
     Region          <58..232
                     /region_name="PHA03378"
                     /note="EBNA-3B; Provisional"
                     /db_xref="CDD:223065"
     Region          <242..385
                     /region_name="Tectonin"
                     /note="Tectonin domain; pfam19193"
                     /db_xref="CDD:465992"
     Region          555..675
                     /region_name="PH1_TECPR1"
                     /note="Tectonin beta-propeller repeat-containing protein 1
                     Pleckstrin homology (PH) domain, repeat 1; cd13300"
                     /db_xref="CDD:270112"
     Region          712..745
                     /region_name="TECPR"
                     /note="Beta propeller repeats in Physarum polycephalum
                     tectonins, Limulus lectin L-6 and animal hypothetical
                     proteins; smart00706"
                     /db_xref="CDD:214782"
     Region          768..828
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          839..867
                     /region_name="DysFC"
                     /note="Dysferlin domain, C-terminal region; smart00694"
                     /db_xref="CDD:128935"
     CDS             1..926
                     /gene="TECPR1"
                     /coded_by="XM_061153699.1:236..3016"
                     /db_xref="GeneID:133063830"
ORIGIN      
        1 mgwrcprrig sgsrtgvdvc hrlpchlhkg qeveflraap avdpvqeiqv sghlgqdpfr
       61 grppaaarpl qrplcgrvgg hrrargppvr vgcdpagqgk eaadkgrpqs wcgrgcpcqp
      121 prvdkaglsp gppphvpsqq rglpeqvacr wgphstpscd pavlgtpwvl vlpeaselpr
      181 mpglglsppg twslgrcppw agrirlgsse rdsapfpltc gashtaespv wyrenvshhn
      241 pegsswslvd tpgeavqisc gphdllwvtl wegqalvreg inrnnpkgss wstvepptse
      301 ngilhvstgv cvvwavtkdr kvwfrrgins hnpcgtswie mfgemmmvnv glndqvwgig
      361 cvdralyfrq gvtqselsgk mwkaivagre gdrslsgssi sllsagcffg nevrssaesc
      421 gpgdtdaswe vpgpasspar lrgkeskkgp shatanfpea tdlssltllp lgleepesad
      481 chalwawvsg ggcaveahtt lkwftaqsgl spsaqtlsls itpaqtaawr kqifqqlter
      541 tkrelesfqh yeqaveqsvw vktgalqwwc dwkphkwvdv hvaleqltgn dgaqdsilfi
      601 yyvvheekky ihvflnevta lvpvfneakh sfalytpert rqrwpvrlaa ateqdmsdwl
      661 tllnlscces rrlhgrpspq aiwsvtckgd ifvsepgpdl eaperrlpcd qmfwrqiggh
      721 lrvveansrg vvwgigydht awvytggygg gcfqglasst snvftqwdvk cvrvyenqrw
      781 npvtgytsrg lptdrymwsd atglqectka stkppslqwt wvsdwfvdfs vpggtdpegw
      841 qyasdfpasy hkyktmkdfv rrrcwarasa gctwaptsps ppspsapatr cgpwrgtapp
      901 staapcpppg pmatagttsr llpnrg
//
LOCUS       XP_061009683            1066 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-associating and dilute domain-containing protein [Dama dama].
ACCESSION   XP_061009683
VERSION     XP_061009683.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153700.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1066
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1066
                     /product="ras-associating and dilute domain-containing
                     protein"
                     /calculated_mol_wt=114704
     Region          50..160
                     /region_name="RA_Radil_like"
                     /note="Ras-associating (RA) domain found in
                     ras-associating and dilute domain-containing protein
                     (Radil) and similar proteins; cd17116"
                     /db_xref="CDD:340636"
     Site            order(64,66,73..82,98..99,114,116,129,131,136..138,141,
                     144..150,152,154)
                     /site_type="other"
                     /note="RA-Rap1b interaction site [polypeptide binding]"
                     /db_xref="CDD:340636"
     Region          243..357
                     /region_name="FHA"
                     /note="forkhead associated (FHA) domain superfamily;
                     cl00062"
                     /db_xref="CDD:469597"
     Site            order(275..276,293..294,296,322..323)
                     /site_type="other"
                     /note="phosphopeptide binding site [polypeptide binding]"
                     /db_xref="CDD:438714"
     Region          406..773
                     /region_name="Myo5p-like_CBD_Rasip1"
                     /note="cargo binding domain of myosin 5-like of
                     Ras-interacting protein 1; cd15472"
                     /db_xref="CDD:271256"
     Region          <806..923
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          963..1050
                     /region_name="PDZ_Radil-like"
                     /note="PDZ domain of Ras-associating and dilute
                     domain-containing protein (Radil) and related domains;
                     cd06690"
                     /db_xref="CDD:467177"
     Site            order(976..982,997,1000,1030,1034,1037..1038)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467177"
     CDS             1..1066
                     /gene="RADIL"
                     /coded_by="XM_061153700.1:132..3332"
                     /db_xref="GeneID:133063832"
ORIGIN      
        1 mfygthfims ppaksklkrq gqllssvlsr tlsykyrdld apcsglgasd dpaelstqls
       61 apgvlkvfgd svcsgthyks vlatgtssar elvrealery alsperasqy vlcdvvgqag
      121 gghtwqaqgf rvfgdnekpl liqelwkpre glsrrfelrk rseveelaar dvdtmtagin
      181 aqarrlqrsr akgtpapaag garsppparl rrtvsetsls saaappaaar gpeepaqdam
      241 rcslyesphl lllqgysqqh dslvyvlnre rhtvgqrtps skpsislsap dilplhctlr
      301 qlqpsgpgpv garlvleplp gapvsvnfae vgarpvvlrh gdllslglhy lllfkdpaqa
      361 rplpaqalar lraapqscrl cgaplrarga papprprplq lefepdveda llqriltlve
      421 pggdgpaltp afllcvcvqh satrlepgaf gqlllkiarl iretvwektk elaekqallp
      481 eppsaascsl aglapdlqhi lfwmanavel lyfvqqrcpl ymqsleeeld vtgskeslfs
      541 caltaseeam avleevvlya fqqcvyyvsk slyvclpall ecppfqsecr eswssgpplp
      601 eelrrvvavy qaaldllrql qvhpeiaaqv laylfffsgt lllnqlldkg pslscfhwpr
      661 gvqacarlqq llewtrsagf geagehffrk lsctlnllat psaqlvqmsw aslraafpal
      721 spaqlhrllt qyqlasamgp msawepgaqd staafkseev lesyenpppi vlpsegfqvd
      781 ldaecpderv yqhllyirhf lcslrsqpgp sgaparpegl qglhhagpeg hpeaqsfppa
      841 srnpsggare aslehplppv ggpraqgppg rlpgrpsrgg pqaadphgdp sclltppgtp
      901 lglepaapdw peggsacgrv lpegrrtgsg glrgtsregd caapedeppp apssrssstd
      961 dfcymfvvel ergpsglgmg lidgmhtplg apglyiqtll pgspaaadgr lalgdrilev
     1021 ngsslagvsy pravdlirhg gkimrflvak sdmetarkvr frtppp
//
LOCUS       XP_061009684            1032 aa            linear   MAM 02-DEC-2023
DEFINITION  delphilin isoform X1 [Dama dama].
ACCESSION   XP_061009684
VERSION     XP_061009684.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153701.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1032
                     /product="delphilin isoform X1"
                     /calculated_mol_wt=113332
     Region          <12..29
                     /region_name="harmonin_N_like"
                     /note="N-terminal protein-binding module of harmonin and
                     similar domains, also known as HHD (harmonin homology
                     domain); cl11968"
                     /db_xref="CDD:448372"
     Region          96..170
                     /region_name="PDZ2_L-delphilin-like"
                     /note="PDZ domain 2 of delphilin (L-delphilin isoform),
                     and related domains; cd06744"
                     /db_xref="CDD:467226"
     Site            order(105..111,119,122,151,155,158..159)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467226"
     Region          206..285
                     /region_name="HN_L-delphilin-R2_like"
                     /note="second harmonin_N_like domain (repeat 2) of
                     L-delphilin, and related domains; cd07355"
                     /db_xref="CDD:259821"
     Site            order(207,210,214,227,230,233..234,237)
                     /site_type="other"
                     /note="putative protein binding site [polypeptide
                     binding]"
                     /db_xref="CDD:259821"
     Region          641..1009
                     /region_name="FH2"
                     /note="Formin Homology 2 Domain; pfam02181"
                     /db_xref="CDD:396655"
     CDS             1..1032
                     /gene="GRID2IP"
                     /coded_by="XM_061153701.1:1..3099"
                     /db_xref="GeneID:133063833"
ORIGIN      
        1 mgkdqgfsrh frifipkkhr arfdevvsqg llgklcrarr tqgaqrlrrs rseerperll
       61 vstrasaapr rpdeppprka asllggrags ggarrtvrvy kgnksfgftl rghgpvwies
      121 vlpgspadna slksgdrilf lngldmrncs hdkvvsmlqg sgamptlvve eglvpfasds
      181 dsmdspnpss altslqwvae ilpssirvqg rtfsqqlehl ltpperygvc ralesffqhr
      241 nidtlivdvy pvldtpakqv lwqfiyqllt yeeqelcqek iacflgytam taepepelep
      301 elepepapep qmrsslrass mcrrslrsqg leaglgcgpg ecpemplppi pgerqagdgt
      361 slpetpnpkm msavyaeles rlsssfkgkm gtssrarasp plpsaagpag prtrssiswp
      421 seqllpspsy yplcseglas pssseshpya sldssrapsp qpgpepvrae sppspdpsrr
      481 pssrrklfaf srpvrsrdtd rfldalseql gprvtivedf lspendyeem sfhddqgsfi
      541 tnerssasec issseegssl tysslsdhip ppplsppppp plpfhdpkps ssrtpdgprg
      601 papalpkpla qlghpvpppp ppplpppvpc appmlprglg hrrsetshms vkrlrweqve
      661 nsegtiwgql gedsdydkls dmvkyldlel hfgtqkaakp vpgpepfrkk evveilshkk
      721 ayntsillah lklspaelrq vlmsmeprrl epahlaqlll fapdadeeqr yqayreapgr
      781 lsepdqfvlq mlsvpeyktr lrslhfqatl qekteeirgs leclrqasle lknsrklaki
      841 lefvlamgny lndgqpqtnk ttgfkinflt elnstktvdg kstflhilak slsqhfpell
      901 gfaqdlptvp laakvnqral tsdladlhgt iseiqaacqs mspssedkfa vvmasfleta
      961 qpllraldgl qreameelgk alaffgedsk attseaffgi faefmskfer algdlqaaeg
     1021 prssgmvspl aw
//
LOCUS       XP_061009685            1025 aa            linear   MAM 02-DEC-2023
DEFINITION  delphilin isoform X2 [Dama dama].
ACCESSION   XP_061009685
VERSION     XP_061009685.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153702.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1025
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1025
                     /product="delphilin isoform X2"
                     /calculated_mol_wt=112376
     Region          89..163
                     /region_name="PDZ2_L-delphilin-like"
                     /note="PDZ domain 2 of delphilin (L-delphilin isoform),
                     and related domains; cd06744"
                     /db_xref="CDD:467226"
     Site            order(98..104,112,115,144,148,151..152)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467226"
     Region          199..278
                     /region_name="HN_L-delphilin-R2_like"
                     /note="second harmonin_N_like domain (repeat 2) of
                     L-delphilin, and related domains; cd07355"
                     /db_xref="CDD:259821"
     Site            order(200,203,207,220,223,226..227,230)
                     /site_type="other"
                     /note="putative protein binding site [polypeptide
                     binding]"
                     /db_xref="CDD:259821"
     Region          634..1002
                     /region_name="FH2"
                     /note="Formin Homology 2 Domain; pfam02181"
                     /db_xref="CDD:396655"
     CDS             1..1025
                     /gene="GRID2IP"
                     /coded_by="XM_061153702.1:1..3078"
                     /db_xref="GeneID:133063833"
ORIGIN      
        1 msclgifipk khrarfdevv sqgllgklcr arrtqgaqrl rrsrseerpe rllvstrasa
       61 aprrpdeppp rkaasllggr agsggarrtv rvykgnksfg ftlrghgpvw iesvlpgspa
      121 dnaslksgdr ilflngldmr ncshdkvvsm lqgsgamptl vveeglvpfa sdsdsmdspn
      181 pssaltslqw vaeilpssir vqgrtfsqql ehlltppery gvcralesff qhrnidtliv
      241 dvypvldtpa kqvlwqfiyq lltyeeqelc qekiacflgy tamtaepepe lepelepepa
      301 pepqmrsslr assmcrrslr sqgleaglgc gpgecpempl ppipgerqag dgtslpetpn
      361 pkmmsavyae lesrlsssfk gkmgtssrar aspplpsaag pagprtrssi swpseqllps
      421 psyyplcseg laspsssesh pyasldssra pspqpgpepv raesppspdp srrpssrrkl
      481 fafsrpvrsr dtdrfldals eqlgprvtiv edflspendy eemsfhddqg sfitnerssa
      541 secissseeg ssltysslsd hipppplspp pppplpfhdp kpsssrtpdg prgpapalpk
      601 plaqlghpvp pppppplppp vpcappmlpr glghrrsets hmsvkrlrwe qvensegtiw
      661 gqlgedsdyd klsdmvkyld lelhfgtqka akpvpgpepf rkkevveils hkkayntsil
      721 lahlklspae lrqvlmsmep rrlepahlaq lllfapdade eqryqayrea pgrlsepdqf
      781 vlqmlsvpey ktrlrslhfq atlqekteei rgsleclrqa slelknsrkl akilefvlam
      841 gnylndgqpq tnkttgfkin fltelnstkt vdgkstflhi lakslsqhfp ellgfaqdlp
      901 tvplaakvnq raltsdladl hgtiseiqaa cqsmspssed kfavvmasfl etaqpllral
      961 dglqreamee lgkalaffge dskattseaf fgifaefmsk feralgdlqa aegprssgmv
     1021 splaw
//
LOCUS       XP_061009686            1210 aa            linear   MAM 02-DEC-2023
DEFINITION  delphilin isoform X3 [Dama dama].
ACCESSION   XP_061009686
VERSION     XP_061009686.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153703.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1210
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1210
                     /product="delphilin isoform X3"
                     /calculated_mol_wt=132624
     Region          2..77
                     /region_name="PDZ1_L-delphilin-like"
                     /note="PDZ domain 1 of delphilin (L-delphilin isoform),
                     and related domains; cd06743"
                     /db_xref="CDD:467225"
     Site            order(11..17,25,28,57,61,64..65)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467225"
     Region          128..207
                     /region_name="HN_L-delphilin-R1_like"
                     /note="first harmonin_N_like domain (repeat 1) of
                     L-delphilin, and related domains; cd07354"
                     /db_xref="CDD:259820"
     Site            order(129,132,136,151,154,157..158,161)
                     /site_type="other"
                     /note="putative protein binding site [polypeptide
                     binding]"
                     /db_xref="CDD:259820"
     Region          274..348
                     /region_name="PDZ2_L-delphilin-like"
                     /note="PDZ domain 2 of delphilin (L-delphilin isoform),
                     and related domains; cd06744"
                     /db_xref="CDD:467226"
     Site            order(283..289,297,300,329,333,336..337)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467226"
     Region          384..463
                     /region_name="HN_L-delphilin-R2_like"
                     /note="second harmonin_N_like domain (repeat 2) of
                     L-delphilin, and related domains; cd07355"
                     /db_xref="CDD:259821"
     Site            order(385,388,392,405,408,411..412,415)
                     /site_type="other"
                     /note="putative protein binding site [polypeptide
                     binding]"
                     /db_xref="CDD:259821"
     Region          819..1187
                     /region_name="FH2"
                     /note="Formin Homology 2 Domain; pfam02181"
                     /db_xref="CDD:396655"
     CDS             1..1210
                     /gene="GRID2IP"
                     /coded_by="XM_061153703.1:7..3639"
                     /db_xref="GeneID:133063833"
ORIGIN      
        1 mpatnqgwpe dfgfrlagsg pcfvldvveg ssahagglrp gdqilevegl avgglsrerl
       61 vrlarrcprv ppslgvlpgp igcpragsgc eplitalrsp rssrslylgr ellrlagrkr
      121 pdavhrerrr kaqefsrkvd evlgdqptak eqvfaalkqf aaeqrvdelv waltlalppe
      181 arepllenlr ifipkkhrar fdevvsqgll gklcrarrtq gaqrlrrsrs eerperllvs
      241 trasaaprrp deppprkaas llggragsgg arrtvrvykg nksfgftlrg hgpvwiesvl
      301 pgspadnasl ksgdrilfln gldmrncshd kvvsmlqgsg amptlvveeg lvpfasdsds
      361 mdspnpssal tslqwvaeil pssirvqgrt fsqqlehllt pperygvcra lesffqhrni
      421 dtlivdvypv ldtpakqvlw qfiyqlltye eqelcqekia cflgytamta epepelepel
      481 epepapepqm rsslrassmc rrslrsqgle aglgcgpgec pemplppipg erqagdgtsl
      541 petpnpkmms avyaelesrl sssfkgkmgt ssrarasppl psaagpagpr trssiswpse
      601 qllpspsyyp lcseglasps sseshpyasl dssrapspqp gpepvraesp pspdpsrrps
      661 srrklfafsr pvrsrdtdrf ldalseqlgp rvtivedfls pendyeemsf hddqgsfitn
      721 erssasecis sseegsslty sslsdhippp plsppppppl pfhdpkpsss rtpdgprgpa
      781 palpkplaql ghpvpppppp plpppvpcap pmlprglghr rsetshmsvk rlrweqvens
      841 egtiwgqlge dsdydklsdm vkyldlelhf gtqkaakpvp gpepfrkkev veilshkkay
      901 ntsillahlk lspaelrqvl msmeprrlep ahlaqlllfa pdadeeqryq ayreapgrls
      961 epdqfvlqml svpeyktrlr slhfqatlqe kteeirgsle clrqaslelk nsrklakile
     1021 fvlamgnyln dgqpqtnktt gfkinfltel nstktvdgks tflhilaksl sqhfpellgf
     1081 aqdlptvpla akvnqralts dladlhgtis eiqaacqsms pssedkfavv masfletaqp
     1141 llraldglqr eameelgkal affgedskat tseaffgifa efmskferal gdlqaaegpr
     1201 ssgmvsplaw
//
LOCUS       XP_061009687            1000 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 316 [Dama dama].
ACCESSION   XP_061009687
VERSION     XP_061009687.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153704.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1000
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1000
                     /product="zinc finger protein 316"
                     /calculated_mol_wt=108077
     Region          151..211
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          <336..505
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          340..360
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          368..388
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(373,375,377,379..380,383..384,387,401,403,407..408,
                     411..412,415,429,431,433,435..436,439..440,443)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          396..416
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(396,399,412,416)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          424..444
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          452..472
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          480..498
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          686..706
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          686..706
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Site            order(691,693,695,697..698,701..702,705,719,721,725..726,
                     729..730,733,747,749,751,753..754,757..758,761)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          698..723
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          714..734
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(714,717,730,734)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          <739..926
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          742..762
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          770..790
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          798..818
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          826..846
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(831,833,835,837..838,841..842,845,859,861,865..866,
                     869..870,873,887,889,891,893..894,897..898,901)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          854..874
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(854,857,870,874)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          882..902
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          910..930
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..1000
                     /gene="ZNF316"
                     /coded_by="XM_061153704.1:802..3804"
                     /db_xref="GeneID:133063834"
ORIGIN      
        1 maaprttpds paaqlerldg secgpdqeee eeegkgeeve aleedqvevl eedqvealee
       61 rlveevvvdv dvevdgtvee alaeeqspas gtqerprggr dtkspglqek alqasrapap
      121 rrdedlereg deeeededed dsltsasqgl vtfedvavyf sleewerlde dqrelykevm
      181 renygilvsl gypvpkpdli frleqgeepw vpdsarpeeg divtgvytga wfwtddiedh
      241 eedddedfla evaeeenepp glwsaaygvg dvpgtwgpdd sdsaqtpegw gldpgglgvl
      301 apeseskpfl pgrepgasll apwafpaava apagrpettc dvcgkvfphr srlakhqryh
      361 aavkpfgcde cgkgfvyrsh laihqrthtg ekpfpcpdcg krfvykshlv thrrihtger
      421 pyrcafcgag fgrrsylvth qrthtgerpy pcphcgrsfs qssalarhqa vhtadrphcc
      481 pdcgqafrlr adfqrhrrgg scaepggegp rrepcnemgp aagpeeaeag pegpevdead
      541 geteeeaear eavveaptsq skddpepdrr flglgnglge gegtsshplg fhfpmhpksw
      601 lhpdgfpilg lpdfgerlpa dgrplpgplg grlslvegag lacdpfggga gpggtsglra
      661 fgpavgglla epataalaee espwicsdcg ktfgrraala khqryhager phrcadcgks
      721 fvygshlarh rrthtgerpf pcpecgarfa rgshlaahvr ghtgekpfvc gvcgagfsrr
      781 ahltahgrah tgerpyacge cgrrfgqsaa ltrhqwahae ekphrcpdcg kgfghssdfk
      841 rhrrthtgek pfrctdcgrg faqrsnlakh rrghtgerpf pcpecgkrfs qrsvlvthqr
      901 thtgerpyac ancgrrfsqs shllthmkth rgasgapgqa paapapkaea pakgppsaga
      961 gtgpgehgst llefaggtsf gseptaafag psgayeetil
//
LOCUS       XP_061009688             927 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase RNF216 isoform X1 [Dama dama].
ACCESSION   XP_061009688
VERSION     XP_061009688.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153705.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..927
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..927
                     /product="E3 ubiquitin-protein ligase RNF216 isoform X1"
                     /calculated_mol_wt=106181
     Region          574..630
                     /region_name="RING-HC_RBR_RNF216"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 216 (RNF216) and similar proteins; cd16630"
                     /db_xref="CDD:438292"
     Region          663..714
                     /region_name="BRcat_RBR_RNF216"
                     /note="BRcat domain found in RING finger protein 216
                     (RNF216); cd20339"
                     /db_xref="CDD:439000"
     Region          725..781
                     /region_name="Rcat_RBR_RNF216"
                     /note="Rcat domain found in RING finger protein 216
                     (RNF216); cd20353"
                     /db_xref="CDD:439014"
     CDS             1..927
                     /gene="RNF216"
                     /coded_by="XM_061153705.1:213..2996"
                     /db_xref="GeneID:133063835"
ORIGIN      
        1 maegnsneev ihlnnfhchr gqdwinlrdg pitisdssde egvpmlvtpa pqqhdeedld
       61 ddvilaetyk pqtsrpnlik paaqwqdlkr lgeerpkksr aafesdtngy fpvynsslfg
      121 sgtqddsedd ygefldlgpp gvsgfmkpsg qterepkpgp shnqatndli nprseqkvii
      181 lkegnlfsea dpldiqnqss eeseteilsn lgeatdildd qaieeecwld hpyfqslnqq
      241 prevpsqvvp qerrpeaelg pllyqheprg tafprpafar pepqqdwipg paspqpahpl
      301 geledqqlai ddeepgpafp lqetqepnle nlwgqeasdv dqeliallvk etevrfpdva
      361 ngyveeiihl knyydlnvlc nfllenpdyp kredrvlmnp nssllasqde mklptidffd
      421 ysklapldqr cfiqaadllm adfkmlssqd ikwalhelkg hyaitrkafs daikkwqels
      481 petsgkrkkr kemnqysyid fkfeqgdkki ekrmfflenk rrhcrsydrr allpavqqeq
      541 efyeqkikem aehedfllal qmneeqyqkd gqliecrccy gefpfeeltq cadahlfcke
      601 cliryaqeav fgsgkselsc megsctcsfp aselekvlpq tilykyyerk aeeevaaaya
      661 delvrcpscs fpalldsdvk rfscpnprcr ketcrkcqgl wkehngltce elaekddiky
      721 rtsieekmta arirkchkcg tgliksegcn rmscrcgaqm cylcrvsisg ydhfcqhprs
      781 pgapcqecsr cslwtdpted deklieeiqk eaeeeqkrkn gentfkrigp plekppekvq
      841 rtealprpvp qnlhqqqipp yafvhppfpl ppvrpvfnnf plnmgpipap yvpplpnmrv
      901 nyefapvhvp lehnlpmhfg pqprhrf
//
LOCUS       XP_061009689             870 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase RNF216 isoform X2 [Dama dama].
ACCESSION   XP_061009689
VERSION     XP_061009689.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153706.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..870
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..870
                     /product="E3 ubiquitin-protein ligase RNF216 isoform X2"
                     /calculated_mol_wt=99736
     Region          <22..257
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          517..573
                     /region_name="RING-HC_RBR_RNF216"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 216 (RNF216) and similar proteins; cd16630"
                     /db_xref="CDD:438292"
     Region          606..657
                     /region_name="BRcat_RBR_RNF216"
                     /note="BRcat domain found in RING finger protein 216
                     (RNF216); cd20339"
                     /db_xref="CDD:439000"
     Region          668..724
                     /region_name="Rcat_RBR_RNF216"
                     /note="Rcat domain found in RING finger protein 216
                     (RNF216); cd20353"
                     /db_xref="CDD:439014"
     CDS             1..870
                     /gene="RNF216"
                     /coded_by="XM_061153706.1:213..2825"
                     /db_xref="GeneID:133063835"
ORIGIN      
        1 maegnsneev ihlnnfhchr gqdwinlrdg pitisdssde egvpmlvtpa pqqhdeedld
       61 ddvilaedds eddygefldl gppgvsgfmk psgqterepk pgpshnqatn dlinprseqk
      121 viilkegnlf seadpldiqn qsseesetei lsnlgeatdi lddqaieeec wldhpyfqsl
      181 nqqprevpsq vvpqerrpea elgpllyqhe prgtafprpa farpepqqdw ipgpaspqpa
      241 hplgeledqq laiddeepgp afplqetqep nlenlwgqea sdvdqelial lvketevrfp
      301 dvangyveei ihlknyydln vlcnfllenp dypkredrvl mnpnssllas qdemklptid
      361 ffdysklapl dqrcfiqaad llmadfkmls sqdikwalhe lkghyaitrk afsdaikkwq
      421 elspetsgkr kkrkemnqys yidfkfeqgd kkiekrmffl enkrrhcrsy drrallpavq
      481 qeqefyeqki kemaehedfl lalqmneeqy qkdgqliecr ccygefpfee ltqcadahlf
      541 ckecliryaq eavfgsgkse lscmegsctc sfpaselekv lpqtilykyy erkaeeevaa
      601 ayadelvrcp scsfpallds dvkrfscpnp rcrketcrkc qglwkehngl tceelaekdd
      661 ikyrtsieek mtaarirkch kcgtglikse gcnrmscrcg aqmcylcrvs isgydhfcqh
      721 prspgapcqe csrcslwtdp teddekliee iqkeaeeeqk rkngentfkr igpplekppe
      781 kvqrtealpr pvpqnlhqqq ippyafvhpp fplppvrpvf nnfplnmgpi papyvpplpn
      841 mrvnyefapv hvplehnlpm hfgpqprhrf
//
LOCUS       XP_061009690             851 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase RNF216 isoform X3 [Dama dama].
ACCESSION   XP_061009690
VERSION     XP_061009690.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153707.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..851
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..851
                     /product="E3 ubiquitin-protein ligase RNF216 isoform X3"
                     /calculated_mol_wt=97637
     Region          574..>619
                     /region_name="RING-HC_RBR_RNF216"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 216 (RNF216) and similar proteins; cd16630"
                     /db_xref="CDD:438292"
     Region          <614..638
                     /region_name="BRcat_Rcat_RBR"
                     /note="BRcat (benign-catalytic) and Rcat
                     (required-for-catalysis) domains, part of the RBR
                     (RING1-BRcat-Rcat) domain; cl45895"
                     /db_xref="CDD:459240"
     Region          649..705
                     /region_name="Rcat_RBR_RNF216"
                     /note="Rcat domain found in RING finger protein 216
                     (RNF216); cd20353"
                     /db_xref="CDD:439014"
     CDS             1..851
                     /gene="RNF216"
                     /coded_by="XM_061153707.1:213..2768"
                     /db_xref="GeneID:133063835"
ORIGIN      
        1 maegnsneev ihlnnfhchr gqdwinlrdg pitisdssde egvpmlvtpa pqqhdeedld
       61 ddvilaetyk pqtsrpnlik paaqwqdlkr lgeerpkksr aafesdtngy fpvynsslfg
      121 sgtqddsedd ygefldlgpp gvsgfmkpsg qterepkpgp shnqatndli nprseqkvii
      181 lkegnlfsea dpldiqnqss eeseteilsn lgeatdildd qaieeecwld hpyfqslnqq
      241 prevpsqvvp qerrpeaelg pllyqheprg tafprpafar pepqqdwipg paspqpahpl
      301 geledqqlai ddeepgpafp lqetqepnle nlwgqeasdv dqeliallvk etevrfpdva
      361 ngyveeiihl knyydlnvlc nfllenpdyp kredrvlmnp nssllasqde mklptidffd
      421 ysklapldqr cfiqaadllm adfkmlssqd ikwalhelkg hyaitrkafs daikkwqels
      481 petsgkrkkr kemnqysyid fkfeqgdkki ekrmfflenk rrhcrsydrr allpavqqeq
      541 efyeqkikem aehedfllal qmneeqyqkd gqliecrccy gefpfeeltq cadahlfcke
      601 cliryaqeav fgsgketcrk cqglwkehng ltceelaekd dikyrtsiee kmtaarirkc
      661 hkcgtgliks egcnrmscrc gaqmcylcrv sisgydhfcq hprspgapcq ecsrcslwtd
      721 pteddeklie eiqkeaeeeq krkngentfk rigpplekpp ekvqrtealp rpvpqnlhqq
      781 qippyafvhp pfplppvrpv fnnfplnmgp ipapyvpplp nmrvnyefap vhvplehnlp
      841 mhfgpqprhr f
//
LOCUS       XP_061009691             864 aa            linear   MAM 02-DEC-2023
DEFINITION  mismatch repair endonuclease PMS2 isoform X1 [Dama dama].
ACCESSION   XP_061009691
VERSION     XP_061009691.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153708.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..864
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..864
                     /product="mismatch repair endonuclease PMS2 isoform X1"
                     /calculated_mol_wt=96016
     Region          13..344
                     /region_name="mutl"
                     /note="DNA mismatch repair protein MutL; TIGR00585"
                     /db_xref="CDD:273155"
     Region          14..855
                     /region_name="mutL"
                     /note="DNA mismatch repair endonuclease MutL; PRK00095"
                     /db_xref="CDD:234630"
     CDS             1..864
                     /gene="PMS2"
                     /coded_by="XM_061153708.1:119..2713"
                     /db_xref="GeneID:133063836"
ORIGIN      
        1 meradgpsse lakaikpidr ksvhqicsgq vvlglstavk elvensvdag atsidlrlkd
       61 ygvelievsd ngcgveeenf egltlkhhts kiqefadltq vetfgfrgea lsslcalsdv
      121 tistchtsvk vgtrlvfdhn gkilqktpyp rprgmtvsvq qlfytlpvrh kefqrnikke
      181 fakmvqvlqa yciisagvri sctnqvgqgk rqpvvctsgs ssmkeniglv fgqkqlqsli
      241 pfvqlppsds iceeyglscs qalhnlfcis gfishcahgv grsstdrqff finrrpcdpa
      301 kvsrlvnevy hmynrhqypf vvlnisvdse cvdinvtpdk rqillqeekl llavlktsli
      361 gmfesdvnkl qvsqqplldv eghlikrpsa emenpepekq ddpaplrthg eekravtisr
      421 lreafslrhs aenksrgpka tdprrvslrq kssaqvpras gppcsqkhis epgeegrtsa
      481 qgphdlmgrv emeedsghgs asasseemss tpetsghast draasspegr fsqenvesre
      541 klpetdcrls gtkchldqes gstsrvlpqp tklsspnakr fkkegiplnp dvlpesvktq
      601 sasasevdva vtvnkkivpl dfsmsslakr ikqscqqeqq resqqnyrkf rakicpgenq
      661 aaedelrkei sktmfaemei igqfnlgfii tklnadifiv dqhatdekyn femlqqhtvl
      721 qgqrliapqt lnltavneai lienleifrk ngfdfvideh apvterakli slptsknwtf
      781 gpqdidellf mlsdspgvmc rpsrvrqmfa sracrksvmi gtplntsemk klithmgemd
      841 hpwncphgrp tmrhianldv isqt
//
LOCUS       XP_061009692             843 aa            linear   MAM 02-DEC-2023
DEFINITION  mismatch repair endonuclease PMS2 isoform X2 [Dama dama].
ACCESSION   XP_061009692
VERSION     XP_061009692.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153709.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..843
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..843
                     /product="mismatch repair endonuclease PMS2 isoform X2"
                     /calculated_mol_wt=94082
     Region          34..323
                     /region_name="mutl"
                     /note="DNA mismatch repair protein MutL; TIGR00585"
                     /db_xref="CDD:273155"
     Region          41..834
                     /region_name="mutL"
                     /note="DNA mismatch repair endonuclease MutL; PRK00095"
                     /db_xref="CDD:234630"
     CDS             1..843
                     /gene="PMS2"
                     /coded_by="XM_061153709.1:19..2550"
                     /db_xref="GeneID:133063836"
ORIGIN      
        1 mggpaagcpw erqseqlrvl pqalhpwseq tgrdlrlkdy gvelievsdn gcgveeenfe
       61 gltlkhhtsk iqefadltqv etfgfrgeal sslcalsdvt istchtsvkv gtrlvfdhng
      121 kilqktpypr prgmtvsvqq lfytlpvrhk efqrnikkef akmvqvlqay ciisagvris
      181 ctnqvgqgkr qpvvctsgss smkeniglvf gqkqlqslip fvqlppsdsi ceeyglscsq
      241 alhnlfcisg fishcahgvg rsstdrqfff inrrpcdpak vsrlvnevyh mynrhqypfv
      301 vlnisvdsec vdinvtpdkr qillqeekll lavlktslig mfesdvnklq vsqqplldve
      361 ghlikrpsae menpepekqd dpaplrthge ekravtisrl reafslrhsa enksrgpkat
      421 dprrvslrqk ssaqvprasg ppcsqkhise pgeegrtsaq gphdlmgrve meedsghgsa
      481 sasseemsst petsghastd raasspegrf sqenvesrek lpetdcrlsg tkchldqesg
      541 stsrvlpqpt klsspnakrf kkegiplnpd vlpesvktqs asasevdvav tvnkkivpld
      601 fsmsslakri kqscqqeqqr esqqnyrkfr akicpgenqa aedelrkeis ktmfaemeii
      661 gqfnlgfiit klnadifivd qhatdekynf emlqqhtvlq gqrliapqtl nltavneail
      721 ienleifrkn gfdfvideha pvteraklis lptsknwtfg pqdidellfm lsdspgvmcr
      781 psrvrqmfas racrksvmig tplntsemkk lithmgemdh pwncphgrpt mrhianldvi
      841 sqt
//
LOCUS       XP_061009693             710 aa            linear   MAM 02-DEC-2023
DEFINITION  mismatch repair endonuclease PMS2 isoform X3 [Dama dama].
ACCESSION   XP_061009693
VERSION     XP_061009693.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153710.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..710
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..710
                     /product="mismatch repair endonuclease PMS2 isoform X3"
                     /calculated_mol_wt=79349
     Region          <2..701
                     /region_name="mutL"
                     /note="DNA mismatch repair endonuclease MutL; PRK00095"
                     /db_xref="CDD:234630"
     Region          68..210
                     /region_name="MutL_Trans_hPMS_2_like"
                     /note="MutL_Trans_hPMS2_like: transducer domain, having a
                     ribosomal S5 domain 2-like fold, found in proteins similar
                     to human PSM2 (hPSM2). hPSM2 belongs to the DNA mismatch
                     repair (MutL/MLH1/PMS2) family. This transducer domain is
                     homologous to the second...; cd03484"
                     /db_xref="CDD:239566"
     Site            186
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:239566"
     Region          526..669
                     /region_name="MutL_C"
                     /note="MutL C terminal dimerisation domain; smart00853"
                     /db_xref="CDD:214857"
     CDS             1..710
                     /gene="PMS2"
                     /coded_by="XM_061153710.1:212..2344"
                     /db_xref="GeneID:133063836"
ORIGIN      
        1 mtvsvqqlfy tlpvrhkefq rnikkefakm vqvlqaycii sagvrisctn qvgqgkrqpv
       61 vctsgsssmk eniglvfgqk qlqslipfvq lppsdsicee yglscsqalh nlfcisgfis
      121 hcahgvgrss tdrqfffinr rpcdpakvsr lvnevyhmyn rhqypfvvln isvdsecvdi
      181 nvtpdkrqil lqeeklllav lktsligmfe sdvnklqvsq qplldveghl ikrpsaemen
      241 pepekqddpa plrthgeekr avtisrlrea fslrhsaenk srgpkatdpr rvslrqkssa
      301 qvprasgppc sqkhisepge egrtsaqgph dlmgrvemee dsghgsasas seemsstpet
      361 sghastdraa sspegrfsqe nvesreklpe tdcrlsgtkc hldqesgsts rvlpqptkls
      421 spnakrfkke giplnpdvlp esvktqsasa sevdvavtvn kkivpldfsm sslakrikqs
      481 cqqeqqresq qnyrkfraki cpgenqaaed elrkeisktm faemeiigqf nlgfiitkln
      541 adifivdqha tdekynfeml qqhtvlqgqr liapqtlnlt avneailien leifrkngfd
      601 fvidehapvt eraklislpt sknwtfgpqd idellfmlsd spgvmcrpsr vrqmfasrac
      661 rksvmigtpl ntsemkklit hmgemdhpwn cphgrptmrh ianldvisqt
//
LOCUS       XP_061009694             844 aa            linear   MAM 02-DEC-2023
DEFINITION  AP-5 complex subunit zeta-1 isoform X1 [Dama dama].
ACCESSION   XP_061009694
VERSION     XP_061009694.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153711.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..844
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..844
                     /product="AP-5 complex subunit zeta-1 isoform X1"
                     /calculated_mol_wt=91467
     Region          320..437
                     /region_name="SPG48"
                     /note="AP-5 complex subunit, vesicle trafficking;
                     pfam14764"
                     /db_xref="CDD:464303"
     Region          <679..799
                     /region_name="Adaptin_N"
                     /note="Adaptin N terminal region; pfam01602"
                     /db_xref="CDD:396262"
     CDS             1..844
                     /gene="AP5Z1"
                     /coded_by="XM_061153711.1:71..2605"
                     /db_xref="GeneID:133063837"
ORIGIN      
        1 mlatgtesll rqarevgaee lgrfcarvsa llqaedwgpd tldalrrlfl ivaatkysrr
       61 lepacvallq talcsprcpe rlqllcaavl remapsdsls lscdhaqssr qlglvasvll
      121 aqgdpqqvrt mgqrvikvle srqpegpslt hllpvvskva slapdalpee qtkalskrlg
      181 dwlryasvqq gaahasggff saprarqpgp vtevdgtvat dfftvlstgq rftedqrlnv
      241 qafsmlrgwl lqggpahpsa tdaddrsele gstlsvlsaa stashllppa ewlrekaley
      301 cqrlleqsgr ralrkadsdl qkaclveavl vldvlcrqdp aflyrvlpcl ralrtrlcgd
      361 pacarallpv arfflrhgea aavdadavyq hlftripseh fhspmlafef vqfcrdplll
      421 lgsnldllkt sfpnlfkfqa wsspaltsef vallpalvda gtaaemlhll ldlpsltaal
      481 dlqlrssqaa serplwdisv rapgclealr dpqaqglfqh llrakasgtt erltplhqll
      541 qplascarvv qcaqavptll raffaavtqf adgalasrla llllersdal fqvegyeadv
      601 hrlvpspaqp edravptppp gsppdgrgpg vsegalsgrv lssqfpalck lhpplvveqa
      661 kellefvgsl ggpsgtgyml tsvvwaigey lsvswdrrct aeqisrffea leallfevtq
      721 arpstalpkc ppqvitvlmt tltklasrsq dliprvslll skmrtlaqsp avgpvhsedd
      781 lgavrtrate llnllkmpsv aqfvltpsve vsqpryhrds ntalplaldm vsrllereas
      841 llpg
//
LOCUS       XP_061009695             807 aa            linear   MAM 02-DEC-2023
DEFINITION  AP-5 complex subunit zeta-1 isoform X2 [Dama dama].
ACCESSION   XP_061009695
VERSION     XP_061009695.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153712.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..807
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..807
                     /product="AP-5 complex subunit zeta-1 isoform X2"
                     /calculated_mol_wt=87882
     Region          320..437
                     /region_name="SPG48"
                     /note="AP-5 complex subunit, vesicle trafficking;
                     pfam14764"
                     /db_xref="CDD:464303"
     Region          <642..762
                     /region_name="Adaptin_N"
                     /note="Adaptin N terminal region; pfam01602"
                     /db_xref="CDD:396262"
     CDS             1..807
                     /gene="AP5Z1"
                     /coded_by="XM_061153712.1:71..2494"
                     /db_xref="GeneID:133063837"
ORIGIN      
        1 mlatgtesll rqarevgaee lgrfcarvsa llqaedwgpd tldalrrlfl ivaatkysrr
       61 lepacvallq talcsprcpe rlqllcaavl remapsdsls lscdhaqssr qlglvasvll
      121 aqgdpqqvrt mgqrvikvle srqpegpslt hllpvvskva slapdalpee qtkalskrlg
      181 dwlryasvqq gaahasggff saprarqpgp vtevdgtvat dfftvlstgq rftedqrlnv
      241 qafsmlrgwl lqggpahpsa tdaddrsele gstlsvlsaa stashllppa ewlrekaley
      301 cqrlleqsgr ralrkadsdl qkaclveavl vldvlcrqdp aflyrvlpcl ralrtrlcgd
      361 pacarallpv arfflrhgea aavdadavyq hlftripseh fhspmlafef vqfcrdplll
      421 lgsnldllkt sfpnlfkfqa wsspaltsef vallpalvda gtaaemlhll ldlpsltaal
      481 dlqlrssqaa serplwdisv rapgclealr dpqaqglfqh llrakasgtt erltplhqll
      541 qplascarvv qcaqavptll raffaavtqf adgalasrla llllersdal fqvegyeadv
      601 hrvlssqfpa lcklhpplvv eqakellefv gslggpsgtg ymltsvvwai geylsvswdr
      661 rctaeqisrf fealeallfe vtqarpstal pkcppqvitv lmttltklas rsqdliprvs
      721 lllskmrtla qspavgpvhs eddlgavrtr atellnllkm psvaqfvltp svevsqpryh
      781 rdsntalpla ldmvsrller easllpg
//
LOCUS       XP_061009696             678 aa            linear   MAM 02-DEC-2023
DEFINITION  AP-5 complex subunit zeta-1 isoform X3 [Dama dama].
ACCESSION   XP_061009696
VERSION     XP_061009696.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153713.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..678
                     /product="AP-5 complex subunit zeta-1 isoform X3"
                     /calculated_mol_wt=73592
     Region          154..271
                     /region_name="SPG48"
                     /note="AP-5 complex subunit, vesicle trafficking;
                     pfam14764"
                     /db_xref="CDD:464303"
     Region          <513..633
                     /region_name="Adaptin_N"
                     /note="Adaptin N terminal region; pfam01602"
                     /db_xref="CDD:396262"
     CDS             1..678
                     /gene="AP5Z1"
                     /coded_by="XM_061153713.1:125..2161"
                     /db_xref="GeneID:133063837"
ORIGIN      
        1 mpflktkals krlgdwlrya svqqgaahas ggffsaprar qpgpvtevdg tvatdfftvl
       61 stgqrftedq rlnvqafsml rgwllqggpa hpsatdaddr selegstlsv lsaastashl
      121 lppaewlrek aleycqrlle qsgrralrka dsdlqkaclv eavlvldvlc rqdpaflyrv
      181 lpclralrtr lcgdpacara llpvarfflr hgeaaavdad avyqhlftri psehfhspml
      241 afefvqfcrd pllllgsnld llktsfpnlf kfqawsspal tsefvallpa lvdagtaaem
      301 lhllldlpsl taaldlqlrs sqaaserplw disvrapgcl ealrdpqaqg lfqhllraka
      361 sgtterltpl hqllqplasc arvvqcaqav ptllraffaa vtqfadgala srlallller
      421 sdalfqvegy eadvhrlvps paqpedravp tpppgsppdg rgpgvsegal sgrvlssqfp
      481 alcklhpplv veqakellef vgslggpsgt gymltsvvwa igeylsvswd rrctaeqisr
      541 ffealeallf evtqarpsta lpkcppqvit vlmttltkla srsqdliprv slllskmrtl
      601 aqspavgpvh seddlgavrt ratellnllk mpsvaqfvlt psvevsqpry hrdsntalpl
      661 aldmvsrlle reasllpg
//
LOCUS       XP_061009697             739 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box/LRR-repeat protein 18 isoform X1 [Dama dama].
ACCESSION   XP_061009697
VERSION     XP_061009697.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153714.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..739
                     /product="F-box/LRR-repeat protein 18 isoform X1"
                     /calculated_mol_wt=79383
     Region          27..70
                     /region_name="F-box_FBXL18"
                     /note="F-box domain found in F-box/LRR-repeat protein 18
                     (FBXL18) and similar proteins; cd22128"
                     /db_xref="CDD:438900"
     Site            order(30,34,37..38,41..42,46,48..49,54..56,58)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438900"
     Region          84..591
                     /region_name="FBXL18_LRR"
                     /note="F-box/LRR-repeat protein 18, LRR; pfam19729"
                     /db_xref="CDD:466163"
     Region          95..119
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          120..144
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          341..383
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          384..413
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          414..449
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          450..481
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          482..529
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          530..556
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          557..586
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..739
                     /gene="FBXL18"
                     /coded_by="XM_061153714.1:351..2570"
                     /db_xref="GeneID:133063838"
ORIGIN      
        1 massgedtcd dsdappaaap vaasahllgf sdeillhils hvpstdlvln vrrtcrklaa
       61 lcldksltht vllqkdyeas edkvkqlvke igrdmqqlsm agcywlsgat vehvarcrgl
      121 vrvnlsgcpl tslrlskvls alphlrslai dvspgfdasq lsgeckatls rvrelkqtly
      181 tpsygvvpcc tsleklllyf eildrtrega vlsgqlmvgq snvphyqhlr vfyarlapgh
      241 inqevvrlyl avlsdrtpen lhaflisvpg sfaesgatrn llesmarnva ldalqlpksw
      301 lngsallqhm kfsspfyfsf srcalsgghl lqrvidggrd lrslaglnls gcahclapdc
      361 llrkaeddid pailealvaa cpnlrhlnls aahhhspegp gqhlcqllar lprlrslslp
      421 vcavadsppr adrapvppam ravprgfgkk vrigvpsvsf pgpagpqpss vfwsllknvp
      481 fldrleligs nfssamprne pairnslppc sraqnvgdae vaaisqlafl rhltlaqlps
      541 iltgsglvsi glqcqqlqsl slahlglmgn vvymsglsdm lkhckrlkdl rasrselwra
      601 egrgttgeht qthrprtqpv magaallqrq rpvlpgaepv lraaaplpgv aqrdpaargr
      661 aglhgalpar ggvppvhrrv prhlpqpaag pppqflrprs kpagitemsd pallpgrgps
      721 rplpepfqlr gtcgakhgd
//
LOCUS       XP_061009698             732 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box/LRR-repeat protein 18 isoform X2 [Dama dama].
ACCESSION   XP_061009698
VERSION     XP_061009698.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153715.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..732
                     /product="F-box/LRR-repeat protein 18 isoform X2"
                     /calculated_mol_wt=78601
     Region          27..70
                     /region_name="F-box_FBXL18"
                     /note="F-box domain found in F-box/LRR-repeat protein 18
                     (FBXL18) and similar proteins; cd22128"
                     /db_xref="CDD:438900"
     Site            order(30,34,37..38,41..42,46,48..49,54..56,58)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438900"
     Region          84..591
                     /region_name="FBXL18_LRR"
                     /note="F-box/LRR-repeat protein 18, LRR; pfam19729"
                     /db_xref="CDD:466163"
     Region          95..119
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          120..144
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          341..383
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          384..413
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          414..449
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          450..481
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          482..529
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          530..556
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          557..586
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..732
                     /gene="FBXL18"
                     /coded_by="XM_061153715.1:349..2547"
                     /db_xref="GeneID:133063838"
ORIGIN      
        1 massgedtcd dsdappaaap vaasahllgf sdeillhils hvpstdlvln vrrtcrklaa
       61 lcldksltht vllqkdyeas edkvkqlvke igrdmqqlsm agcywlsgat vehvarcrgl
      121 vrvnlsgcpl tslrlskvls alphlrslai dvspgfdasq lsgeckatls rvrelkqtly
      181 tpsygvvpcc tsleklllyf eildrtrega vlsgqlmvgq snvphyqhlr vfyarlapgh
      241 inqevvrlyl avlsdrtpen lhaflisvpg sfaesgatrn llesmarnva ldalqlpksw
      301 lngsallqhm kfsspfyfsf srcalsgghl lqrvidggrd lrslaglnls gcahclapdc
      361 llrkaeddid pailealvaa cpnlrhlnls aahhhspegp gqhlcqllar lprlrslslp
      421 vcavadsppr adrapvppam ravprgfgkk vrigvpsvsf pgpagpqpss vfwsllknvp
      481 fldrleligs nfssamprne pairnslppc sraqnvgdae vaaisqlafl rhltlaqlps
      541 iltgsglvsi glqcqqlqsl slahlglmgn vvymsglsdm lkhckrlkdl rasrselwra
      601 egrgttgeht qthrprtqpv magaallqrq rpvlpgaepv lraaaplpgv aqrdpaargr
      661 aglhgalpar ggvppvhrrv prhlpqpaag pppqfpggaa raerrhlppa prgpdrrdpg
      721 rahgapgrgh li
//
LOCUS       XP_061009699             719 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box/LRR-repeat protein 18 isoform X3 [Dama dama].
ACCESSION   XP_061009699
VERSION     XP_061009699.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153716.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..719
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..719
                     /product="F-box/LRR-repeat protein 18 isoform X3"
                     /calculated_mol_wt=77593
     Region          27..70
                     /region_name="F-box_FBXL18"
                     /note="F-box domain found in F-box/LRR-repeat protein 18
                     (FBXL18) and similar proteins; cd22128"
                     /db_xref="CDD:438900"
     Site            order(30,34,37..38,41..42,46,48..49,54..56,58)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438900"
     Region          84..669
                     /region_name="FBXL18_LRR"
                     /note="F-box/LRR-repeat protein 18, LRR; pfam19729"
                     /db_xref="CDD:466163"
     Region          96..119
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          120..144
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          384..413
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          414..481
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          482..529
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          530..556
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          557..586
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          587..612
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          613..637
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..719
                     /gene="FBXL18"
                     /coded_by="XM_061153716.1:349..2508"
                     /db_xref="GeneID:133063838"
ORIGIN      
        1 massgedtcd dsdappaaap vaasahllgf sdeillhils hvpstdlvln vrrtcrklaa
       61 lcldksltht vllqkdyeas edkvkqlvke igrdmqqlsm agcywlsgat vehvarcrgl
      121 vrvnlsgcpl tslrlskvls alphlrslai dvspgfdasq lsgeckatls rvrelkqtly
      181 tpsygvvpcc tsleklllyf eildrtrega vlsgqlmvgq snvphyqhlr vfyarlapgh
      241 inqevvrlyl avlsdrtpen lhaflisvpg sfaesgatrn llesmarnva ldalqlpksw
      301 lngsallqhm kfsspfyfsf srcalsgghl lqrvidggrd lrslaglnls gcahclapdc
      361 llrkaeddid pailealvaa cpnlrhlnls aahhhspegp gqhlcqllar lprlrslslp
      421 vcavadsppr adrapvppam ravprgfgkk vrigvpsvsf pgpagpqpss vfwsllknvp
      481 fldrleligs nfssamprne pairnslppc sraqnvgdae vaaisqlafl rhltlaqlps
      541 iltgsglvsi glqcqqlqsl slahlglmgn vvymsglsdm lkhckrlkdl rleqpyfsan
      601 aqffqalsqc salqrlclvs rsgtlqpeav lafmarclrv vvchlftges lgtcrslqqa
      661 llrsvqvprs dsqavsrkwp gcllsrmaip slsfpvgrra lgpqpcpcem ppdspgapg
//
LOCUS       XP_061009700             715 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box/LRR-repeat protein 18 isoform X4 [Dama dama].
ACCESSION   XP_061009700
VERSION     XP_061009700.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153717.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..715
                     /product="F-box/LRR-repeat protein 18 isoform X4"
                     /calculated_mol_wt=77747
     Region          27..70
                     /region_name="F-box_FBXL18"
                     /note="F-box domain found in F-box/LRR-repeat protein 18
                     (FBXL18) and similar proteins; cd22128"
                     /db_xref="CDD:438900"
     Site            order(30,34,37..38,41..42,46,48..49,54..56,58)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438900"
     Region          84..672
                     /region_name="FBXL18_LRR"
                     /note="F-box/LRR-repeat protein 18, LRR; pfam19729"
                     /db_xref="CDD:466163"
     Region          95..119
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          120..144
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          384..413
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          414..481
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          482..529
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          530..556
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          557..586
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          587..612
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          613..637
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..715
                     /gene="FBXL18"
                     /coded_by="XM_061153717.1:348..2495"
                     /db_xref="GeneID:133063838"
ORIGIN      
        1 massgedtcd dsdappaaap vaasahllgf sdeillhils hvpstdlvln vrrtcrklaa
       61 lcldksltht vllqkdyeas edkvkqlvke igrdmqqlsm agcywlsgat vehvarcrgl
      121 vrvnlsgcpl tslrlskvls alphlrslai dvspgfdasq lsgeckatls rvrelkqtly
      181 tpsygvvpcc tsleklllyf eildrtrega vlsgqlmvgq snvphyqhlr vfyarlapgh
      241 inqevvrlyl avlsdrtpen lhaflisvpg sfaesgatrn llesmarnva ldalqlpksw
      301 lngsallqhm kfsspfyfsf srcalsgghl lqrvidggrd lrslaglnls gcahclapdc
      361 llrkaeddid pailealvaa cpnlrhlnls aahhhspegp gqhlcqllar lprlrslslp
      421 vcavadsppr adrapvppam ravprgfgkk vrigvpsvsf pgpagpqpss vfwsllknvp
      481 fldrleligs nfssamprne pairnslppc sraqnvgdae vaaisqlafl rhltlaqlps
      541 iltgsglvsi glqcqqlqsl slahlglmgn vvymsglsdm lkhckrlkdl rleqpyfsan
      601 aqffqalsqc salqrlclvs rsgtlqpeav lafmarclrv vvchlftges lgtcrslqqa
      661 llrsfqaerp alnvvifpll hegltdvird vpmvhldevt lfksrvaeep pnlww
//
LOCUS       XP_061009701             703 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box/LRR-repeat protein 18 isoform X5 [Dama dama].
ACCESSION   XP_061009701
VERSION     XP_061009701.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153718.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..703
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..703
                     /product="F-box/LRR-repeat protein 18 isoform X5"
                     /calculated_mol_wt=75648
     Region          27..70
                     /region_name="F-box_FBXL18"
                     /note="F-box domain found in F-box/LRR-repeat protein 18
                     (FBXL18) and similar proteins; cd22128"
                     /db_xref="CDD:438900"
     Site            order(30,34,37..38,41..42,46,48..49,54..56,58)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438900"
     Region          84..591
                     /region_name="FBXL18_LRR"
                     /note="F-box/LRR-repeat protein 18, LRR; pfam19729"
                     /db_xref="CDD:466163"
     Region          95..119
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          120..144
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          341..383
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          384..413
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          414..449
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          450..481
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          482..529
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          530..556
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          557..586
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..703
                     /gene="FBXL18"
                     /coded_by="XM_061153718.1:350..2461"
                     /db_xref="GeneID:133063838"
ORIGIN      
        1 massgedtcd dsdappaaap vaasahllgf sdeillhils hvpstdlvln vrrtcrklaa
       61 lcldksltht vllqkdyeas edkvkqlvke igrdmqqlsm agcywlsgat vehvarcrgl
      121 vrvnlsgcpl tslrlskvls alphlrslai dvspgfdasq lsgeckatls rvrelkqtly
      181 tpsygvvpcc tsleklllyf eildrtrega vlsgqlmvgq snvphyqhlr vfyarlapgh
      241 inqevvrlyl avlsdrtpen lhaflisvpg sfaesgatrn llesmarnva ldalqlpksw
      301 lngsallqhm kfsspfyfsf srcalsgghl lqrvidggrd lrslaglnls gcahclapdc
      361 llrkaeddid pailealvaa cpnlrhlnls aahhhspegp gqhlcqllar lprlrslslp
      421 vcavadsppr adrapvppam ravprgfgkk vrigvpsvsf pgpagpqpss vfwsllknvp
      481 fldrleligs nfssamprne pairnslppc sraqnvgdae vaaisqlafl rhltlaqlps
      541 iltgsglvsi glqcqqlqsl slahlglmgn vvymsglsdm lkhckrlkdl rasrselwra
      601 egrgttgeht qthrprtqpv magaallqrq rpvlpgaepv lraaaplpgv aqrdpaargr
      661 aglhgalpar ggvppvhrrv prhlpqpaag pppqifyngh rgn
//
LOCUS       XP_061009702             699 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box/LRR-repeat protein 18 isoform X6 [Dama dama].
ACCESSION   XP_061009702
VERSION     XP_061009702.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153719.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..699
                     /product="F-box/LRR-repeat protein 18 isoform X6"
                     /calculated_mol_wt=75923
     Region          27..70
                     /region_name="F-box_FBXL18"
                     /note="F-box domain found in F-box/LRR-repeat protein 18
                     (FBXL18) and similar proteins; cd22128"
                     /db_xref="CDD:438900"
     Site            order(30,34,37..38,41..42,46,48..49,54..56,58)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438900"
     Region          84..667
                     /region_name="FBXL18_LRR"
                     /note="F-box/LRR-repeat protein 18, LRR; pfam19729"
                     /db_xref="CDD:466163"
     Region          95..119
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          120..144
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          384..413
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          414..481
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          482..529
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          530..556
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          557..586
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          587..612
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          613..637
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..699
                     /gene="FBXL18"
                     /coded_by="XM_061153719.1:349..2448"
                     /db_xref="GeneID:133063838"
ORIGIN      
        1 massgedtcd dsdappaaap vaasahllgf sdeillhils hvpstdlvln vrrtcrklaa
       61 lcldksltht vllqkdyeas edkvkqlvke igrdmqqlsm agcywlsgat vehvarcrgl
      121 vrvnlsgcpl tslrlskvls alphlrslai dvspgfdasq lsgeckatls rvrelkqtly
      181 tpsygvvpcc tsleklllyf eildrtrega vlsgqlmvgq snvphyqhlr vfyarlapgh
      241 inqevvrlyl avlsdrtpen lhaflisvpg sfaesgatrn llesmarnva ldalqlpksw
      301 lngsallqhm kfsspfyfsf srcalsgghl lqrvidggrd lrslaglnls gcahclapdc
      361 llrkaeddid pailealvaa cpnlrhlnls aahhhspegp gqhlcqllar lprlrslslp
      421 vcavadsppr adrapvppam ravprgfgkk vrigvpsvsf pgpagpqpss vfwsllknvp
      481 fldrleligs nfssamprne pairnslppc sraqnvgdae vaaisqlafl rhltlaqlps
      541 iltgsglvsi glqcqqlqsl slahlglmgn vvymsglsdm lkhckrlkdl rleqpyfsan
      601 aqffqalsqc salqrlclvs rsgtlqpeav lafmarclrv vvchlftges lgtcrslqqa
      661 llrrfstmgt eeinaemerk nthkkkvnki mslktysgn
//
LOCUS       XP_061009703             698 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box/LRR-repeat protein 18 isoform X7 [Dama dama].
ACCESSION   XP_061009703
VERSION     XP_061009703.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153720.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..698
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..698
                     /product="F-box/LRR-repeat protein 18 isoform X7"
                     /calculated_mol_wt=74907
     Region          27..70
                     /region_name="F-box_FBXL18"
                     /note="F-box domain found in F-box/LRR-repeat protein 18
                     (FBXL18) and similar proteins; cd22128"
                     /db_xref="CDD:438900"
     Site            order(30,34,37..38,41..42,46,48..49,54..56,58)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438900"
     Region          84..591
                     /region_name="FBXL18_LRR"
                     /note="F-box/LRR-repeat protein 18, LRR; pfam19729"
                     /db_xref="CDD:466163"
     Region          96..119
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          120..144
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          341..383
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          384..413
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          414..449
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          450..481
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          482..529
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          530..556
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          557..586
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..698
                     /gene="FBXL18"
                     /coded_by="XM_061153720.1:350..2446"
                     /db_xref="GeneID:133063838"
ORIGIN      
        1 massgedtcd dsdappaaap vaasahllgf sdeillhils hvpstdlvln vrrtcrklaa
       61 lcldksltht vllqkdyeas edkvkqlvke igrdmqqlsm agcywlsgat vehvarcrgl
      121 vrvnlsgcpl tslrlskvls alphlrslai dvspgfdasq lsgeckatls rvrelkqtly
      181 tpsygvvpcc tsleklllyf eildrtrega vlsgqlmvgq snvphyqhlr vfyarlapgh
      241 inqevvrlyl avlsdrtpen lhaflisvpg sfaesgatrn llesmarnva ldalqlpksw
      301 lngsallqhm kfsspfyfsf srcalsgghl lqrvidggrd lrslaglnls gcahclapdc
      361 llrkaeddid pailealvaa cpnlrhlnls aahhhspegp gqhlcqllar lprlrslslp
      421 vcavadsppr adrapvppam ravprgfgkk vrigvpsvsf pgpagpqpss vfwsllknvp
      481 fldrleligs nfssamprne pairnslppc sraqnvgdae vaaisqlafl rhltlaqlps
      541 iltgsglvsi glqcqqlqsl slahlglmgn vvymsglsdm lkhckrlkdl rasrselwra
      601 egrgttgeht qthrprtqpv magaallqrq rpvlpgaepv lraaaplpgv aqrdpaargr
      661 aglhgalpar ggvppvhrrv prhlpqpaag pppqcags
//
LOCUS       XP_061009704             677 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box/LRR-repeat protein 18 isoform X8 [Dama dama].
ACCESSION   XP_061009704
VERSION     XP_061009704.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153721.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..677
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..677
                     /product="F-box/LRR-repeat protein 18 isoform X8"
                     /calculated_mol_wt=73270
     Region          27..70
                     /region_name="F-box_FBXL18"
                     /note="F-box domain found in F-box/LRR-repeat protein 18
                     (FBXL18) and similar proteins; cd22128"
                     /db_xref="CDD:438900"
     Site            order(30,34,37..38,41..42,46,48..49,54..56,58)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438900"
     Region          84..669
                     /region_name="FBXL18_LRR"
                     /note="F-box/LRR-repeat protein 18, LRR; pfam19729"
                     /db_xref="CDD:466163"
     Region          384..413
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          414..481
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          482..529
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          530..556
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          557..586
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          587..612
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          613..637
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..677
                     /gene="FBXL18"
                     /coded_by="XM_061153721.1:349..2382"
                     /db_xref="GeneID:133063838"
ORIGIN      
        1 massgedtcd dsdappaaap vaasahllgf sdeillhils hvpstdlvln vrrtcrklaa
       61 lcldksltht vllqkdyeas edkvkqlvke igrdmqqlsm agcywlsgat vehvarcrgl
      121 vrvnlsgcpl tslrlskvls alphlrslai dvspgfdasq lsgeckatls rvrelkqtly
      181 tpsygvvpcc tsleklllyf eildrtrega vlsgqlmvgq snvphyqhlr vfyarlapgh
      241 inqevvrlyl avlsdrtpen lhaflisvpg sfaesgatrn llesmarnva ldalqlpksw
      301 lngsallqhm kfsspfyfsf srcalsgghl lqrvidggrd lrslaglnls gcahclapdc
      361 llrkaeddid pailealvaa cpnlrhlnls aahhhspegp gqhlcqllar lprlrslslp
      421 vcavadsppr adrapvppam ravprgfgkk vrigvpsvsf pgpagpqpss vfwsllknvp
      481 fldrleligs nfssamprne pairnslppc sraqnvgdae vaaisqlafl rhltlaqlps
      541 iltgsglvsi glqcqqlqsl slahlglmgn vvymsglsdm lkhckrlkdl rleqpyfsan
      601 aqffqalsqc salqrlclvs rsgtlqpeav lafmarclrv vvchlftges lgtcrslqqa
      661 llrsfsgqea sqqvllr
//
LOCUS       XP_061009705             645 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box/LRR-repeat protein 18 isoform X9 [Dama dama].
ACCESSION   XP_061009705
VERSION     XP_061009705.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153722.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..645
                     /product="F-box/LRR-repeat protein 18 isoform X9"
                     /calculated_mol_wt=69275
     Region          1..497
                     /region_name="FBXL18_LRR"
                     /note="F-box/LRR-repeat protein 18, LRR; pfam19729"
                     /db_xref="CDD:466163"
     Region          2..25
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          26..50
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          247..289
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          290..319
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          320..355
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          356..387
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          388..435
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          436..462
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          463..492
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..645
                     /gene="FBXL18"
                     /coded_by="XM_061153722.1:514..2451"
                     /db_xref="GeneID:133063838"
ORIGIN      
        1 mqqlsmagcy wlsgatvehv arcrglvrvn lsgcpltslr lskvlsalph lrslaidvsp
       61 gfdasqlsge ckatlsrvre lkqtlytpsy gvvpcctsle klllyfeild rtregavlsg
      121 qlmvgqsnvp hyqhlrvfya rlapghinqe vvrlylavls drtpenlhaf lisvpgsfae
      181 sgatrnlles marnvaldal qlpkswlngs allqhmkfss pfyfsfsrca lsgghllqrv
      241 idggrdlrsl aglnlsgcah clapdcllrk aeddidpail ealvaacpnl rhlnlsaahh
      301 hspegpgqhl cqllarlprl rslslpvcav adsppradra pvppamravp rgfgkkvrig
      361 vpsvsfpgpa gpqpssvfws llknvpfldr leligsnfss amprnepair nslppcsraq
      421 nvgdaevaai sqlaflrhlt laqlpsiltg sglvsiglqc qqlqslslah lglmgnvvym
      481 sglsdmlkhc krlkdlrasr selwraegrg ttgehtqthr prtqpvmaga allqrqrpvl
      541 pgaepvlraa aplpgvaqrd paargraglh galparggvp pvhrrvprhl pqpaagpppq
      601 flrprskpag itemsdpall pgrgpsrplp epfqlrgtcg akhgd
//
LOCUS       XP_061009706             713 aa            linear   MAM 02-DEC-2023
DEFINITION  RB-associated KRAB zinc finger protein [Dama dama].
ACCESSION   XP_061009706
VERSION     XP_061009706.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153723.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..713
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..713
                     /product="RB-associated KRAB zinc finger protein"
                     /calculated_mol_wt=82617
     Region          8..68
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          259..>307
                     /region_name="SUF4-like"
                     /note="N-terminal domain of Oryza sativa transcription
                     factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana
                     SUF4 (AtSUF4), and similar proteins; cd20908"
                     /db_xref="CDD:411020"
     Region          263..284
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:411020"
     Region          263..283
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(268,274,281,283,290,297)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:411020"
     Region          291..311
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          317..339
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          319..339
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(324,326,328,330..331,334..335,338,352,354,358..359,
                     362..363,366,380,382,384,386..387,390..391,394)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          343..699
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          347..367
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(347,350,363,367)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          375..395
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          403..423
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          431..451
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          459..479
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          487..503
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          511..531
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          539..559
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          567..587
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(572,574,576,578..579,582..583,586,600,602,606..607,
                     610..611,614,628,630,632,634..635,638..639,642)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          595..615
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(595,598,611,615)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          623..643
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          651..671
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(651,654,667,671)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          679..699
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..713
                     /gene="RBAK"
                     /coded_by="XM_061153723.1:559..2700"
                     /db_xref="GeneID:133063840"
ORIGIN      
        1 mnesqgsvsf rdvavdftqe ewqqldpdek mtyrdvmlen yshlvsvgyd stkpnviikl
       61 eqgeepwvad skflqqqhpe kvwkvgdlie riqenedecs rqavsinsrt lteeredafd
      121 ktynmetnla psnlmshncv scgktlests eliisdgsya rkkpdecsec gktygeklye
      181 fhqngeacsq neesiqkini lekpfeynrc tealdneavf ithkstymge khyewndsgp
      241 dfiemsnfni yqrsqmdlkp fecsecgksf ckkskfiihq rahtgekpya cnvcgksfsq
      301 kgtltvhrrs hleekpykcn ecgktfcqkl hltqhlrths gekpyecnec gktfcqkthl
      361 tlhqrnhsge rpypcsecgk sfsrksalsd hqrthtgekl ykcnecgksy yrkstlithq
      421 rthtgekpyq csecgkffsr vsyltihyrs hleekpyecn ecgktfnlns afirhrkvht
      481 dekphecsec gklshltslh tthlgekpye csecgktffe nsafdghqpl ptgeksyecn
      541 icgkvfsels yytihyrshs eekpygcnec gktfshnssl frhqrvhtge kpyecyecgk
      601 ffsqksylti hhrihsgekp yecskcgkvf srmsnltvhy rshsgekpye cnecgkvfsq
      661 ksyltvhyrt hsgekpyecn ecgkkfhhrs afnshqrihr rgnlnlldmg sll
//
LOCUS       XP_061009707             698 aa            linear   MAM 02-DEC-2023
DEFINITION  eukaryotic translation initiation factor 2-alpha kinase 1 isoform
            X1 [Dama dama].
ACCESSION   XP_061009707
VERSION     XP_061009707.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153724.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..698
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..698
                     /product="eukaryotic translation initiation factor 2-alpha
                     kinase 1 isoform X1"
                     /calculated_mol_wt=78074
     Region          190..648
                     /region_name="STKc_EIF2AK1_HRI"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     eukaryotic translation Initiation Factor 2-Alpha Kinase 2
                     or Heme-Regulated Inhibitor kinase; cd14049"
                     /db_xref="CDD:270951"
     Site            order(190..192,195..196,242..243,246..247,249..250,
                     258..266,268,411,499,502..504)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:270951"
     Site            order(203..204,209,211,224,226,415..418,421,513..514,516,
                     528,560..562,593,595..602)
                     /site_type="active"
                     /db_xref="CDD:270951"
     Site            order(203..204,209,211,224,226,257,415..418,421,509,511,
                     513..514,516,528)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270951"
     Site            order(527..536,551..562)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270951"
     Site            order(560..562,593,595..602)
                     /site_type="other"
                     /note="eIF2alpha (substrate) binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270951"
     CDS             1..698
                     /gene="EIF2AK1"
                     /coded_by="XM_061153724.1:66..2162"
                     /db_xref="GeneID:133063841"
ORIGIN      
        1 mlggvsgaae reaegdaaga vpappaidfp aegsdpkyde kkreaqsvqt ytvflyesfr
       61 cttnglsyte sdvpaelqvl kgplqqptfp favanqlllv sllehlshvh epnplrsrqv
      121 fkllcqtfik mgllssftcs defsslrlhh nraithlmrs akervrqgpc ednshiqkir
      181 arevafeaqt srylnefeel avlgkggygr vykvrnkldg qyyaikkili kgatktdcmk
      241 vlrevkvlag lqhpnivgyh tawiehvhva hrqadrlslq lpslevisdq kdpsthyevk
      301 sdgsnsssii faeltseeek slrepgvedn qnnglvnyss svvardagdf esslelresd
      361 vtdgssrpiv grrlplrhns dpeenftste esseenlnml gqtevqyrlm lhiqmqlcel
      421 slwdwiaerd grgrqsaees achhkqekse trgpsrgmtt ncnvvswmes wnrkrtlgpy
      481 vmasvatkif qelvegvfyi hnmgivhrdl kprniflhgp dqqvkigdfg lacadiiqks
      541 tdwggadgar tpthtsrvgt clyaspeqle gseydaksdm yslgvillel fqpfgtemer
      601 ahvltglrsg qipealskrc pvqakyiqhl trknsaqrps aiqllqself qnsgnvnltl
      661 qmkileqeke iqelrkqlsl lsqnkgvkgd rrdggvpi
//
LOCUS       XP_061009708             674 aa            linear   MAM 02-DEC-2023
DEFINITION  eukaryotic translation initiation factor 2-alpha kinase 1 isoform
            X2 [Dama dama].
ACCESSION   XP_061009708
VERSION     XP_061009708.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153725.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..674
                     /product="eukaryotic translation initiation factor 2-alpha
                     kinase 1 isoform X2"
                     /calculated_mol_wt=75368
     Region          166..624
                     /region_name="STKc_EIF2AK1_HRI"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     eukaryotic translation Initiation Factor 2-Alpha Kinase 2
                     or Heme-Regulated Inhibitor kinase; cd14049"
                     /db_xref="CDD:270951"
     Site            order(166..168,171..172,218..219,222..223,225..226,
                     234..242,244,387,475,478..480)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:270951"
     Site            order(179..180,185,187,200,202,391..394,397,489..490,492,
                     504,536..538,569,571..578)
                     /site_type="active"
                     /db_xref="CDD:270951"
     Site            order(179..180,185,187,200,202,233,391..394,397,485,487,
                     489..490,492,504)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270951"
     Site            order(503..512,527..538)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270951"
     Site            order(536..538,569,571..578)
                     /site_type="other"
                     /note="eIF2alpha (substrate) binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270951"
     CDS             1..674
                     /gene="EIF2AK1"
                     /coded_by="XM_061153725.1:39..2063"
                     /db_xref="GeneID:133063841"
ORIGIN      
        1 marvspgmlg rssrqkgeav gdlagtvpap paidfsaess dpkrdesdvp aelqvlkgpl
       61 qqptfpfava nqlllvslle hlshvhepnp lrsrqvfkll cqtfikmgll ssftcsdefs
      121 slrlhhnrai thlmrsaker vrqgpcedns hiqkirarev afeaqtsryl nefeelavlg
      181 kggygrvykv rnkldgqyya ikkilikgat ktdcmkvlre vkvlaglqhp nivgyhtawi
      241 ehvhvahrqa drlslqlpsl evisdqkdps thyevksdgs nsssiifael tseeekslre
      301 pgvednqnng lvnysssvva rdagdfessl elresdvtdg ssrpivgrrl plrhnsdpee
      361 nftsteesse enlnmlgqte vqyrlmlhiq mqlcelslwd wiaerdgrgr qsaeesachh
      421 kqeksetrgp srgmttncnv vswmeswnrk rtlgpyvmas vatkifqelv egvfyihnmg
      481 ivhrdlkprn iflhgpdqqv kigdfglaca diiqkstdwg gadgartpth tsrvgtclya
      541 speqlegsey daksdmyslg villelfqpf gtemerahvl tglrsgqipe alskrcpvqa
      601 kyiqhltrkn saqrpsaiql lqselfqnsg nvnltlqmki leqekeiqel rkqlsllsqn
      661 kgvkgdrrdg gvpi
//
LOCUS       XP_061009709             668 aa            linear   MAM 02-DEC-2023
DEFINITION  eukaryotic translation initiation factor 2-alpha kinase 1 isoform
            X3 [Dama dama].
ACCESSION   XP_061009709
VERSION     XP_061009709.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153726.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..668
                     /product="eukaryotic translation initiation factor 2-alpha
                     kinase 1 isoform X3"
                     /calculated_mol_wt=74542
     Region          160..618
                     /region_name="STKc_EIF2AK1_HRI"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     eukaryotic translation Initiation Factor 2-Alpha Kinase 2
                     or Heme-Regulated Inhibitor kinase; cd14049"
                     /db_xref="CDD:270951"
     Site            order(160..162,165..166,212..213,216..217,219..220,
                     228..236,238,381,469,472..474)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:270951"
     Site            order(173..174,179,181,194,196,385..388,391,483..484,486,
                     498,530..532,563,565..572)
                     /site_type="active"
                     /db_xref="CDD:270951"
     Site            order(173..174,179,181,194,196,227,385..388,391,479,481,
                     483..484,486,498)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270951"
     Site            order(497..506,521..532)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270951"
     Site            order(530..532,563,565..572)
                     /site_type="other"
                     /note="eIF2alpha (substrate) binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270951"
     CDS             1..668
                     /gene="EIF2AK1"
                     /coded_by="XM_061153726.1:64..2070"
                     /db_xref="GeneID:133063841"
ORIGIN      
        1 mlggvsgaae reaegdaaga vpappaidfp aegsdpkyde sdvpaelqvl kgplqqptfp
       61 favanqlllv sllehlshvh epnplrsrqv fkllcqtfik mgllssftcs defsslrlhh
      121 nraithlmrs akervrqgpc ednshiqkir arevafeaqt srylnefeel avlgkggygr
      181 vykvrnkldg qyyaikkili kgatktdcmk vlrevkvlag lqhpnivgyh tawiehvhva
      241 hrqadrlslq lpslevisdq kdpsthyevk sdgsnsssii faeltseeek slrepgvedn
      301 qnnglvnyss svvardagdf esslelresd vtdgssrpiv grrlplrhns dpeenftste
      361 esseenlnml gqtevqyrlm lhiqmqlcel slwdwiaerd grgrqsaees achhkqekse
      421 trgpsrgmtt ncnvvswmes wnrkrtlgpy vmasvatkif qelvegvfyi hnmgivhrdl
      481 kprniflhgp dqqvkigdfg lacadiiqks tdwggadgar tpthtsrvgt clyaspeqle
      541 gseydaksdm yslgvillel fqpfgtemer ahvltglrsg qipealskrc pvqakyiqhl
      601 trknsaqrps aiqllqself qnsgnvnltl qmkileqeke iqelrkqlsl lsqnkgvkgd
      661 rrdggvpi
//
LOCUS       XP_061009710             667 aa            linear   MAM 02-DEC-2023
DEFINITION  eukaryotic translation initiation factor 2-alpha kinase 1 isoform
            X4 [Dama dama].
ACCESSION   XP_061009710
VERSION     XP_061009710.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153727.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..667
                     /product="eukaryotic translation initiation factor 2-alpha
                     kinase 1 isoform X4"
                     /calculated_mol_wt=74470
     Region          160..617
                     /region_name="STKc_EIF2AK1_HRI"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     eukaryotic translation Initiation Factor 2-Alpha Kinase 2
                     or Heme-Regulated Inhibitor kinase; cd14049"
                     /db_xref="CDD:270951"
     Site            order(160..162,165..166,212..213,216..217,219..220,
                     228..236,238,380,468,471..473)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:270951"
     Site            order(173..174,179,181,194,196,384..387,390,482..483,485,
                     497,529..531,562,564..571)
                     /site_type="active"
                     /db_xref="CDD:270951"
     Site            order(173..174,179,181,194,196,227,384..387,390,478,480,
                     482..483,485,497)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270951"
     Site            order(496..505,520..531)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270951"
     Site            order(529..531,562,564..571)
                     /site_type="other"
                     /note="eIF2alpha (substrate) binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270951"
     CDS             1..667
                     /gene="EIF2AK1"
                     /coded_by="XM_061153727.1:64..2067"
                     /db_xref="GeneID:133063841"
ORIGIN      
        1 mlggvsgaae reaegdaaga vpappaidfp aegsdpkyde sdvpaelqvl kgplqqptfp
       61 favanqlllv sllehlshvh epnplrsrqv fkllcqtfik mgllssftcs defsslrlhh
      121 nraithlmrs akervrqgpc ednshiqkir arevafeaqt srylnefeel avlgkggygr
      181 vykvrnkldg qyyaikkili kgatktdcmk vlrevkvlag lqhpnivgyh tawiehvhva
      241 hrqdrlslql pslevisdqk dpsthyevks dgsnsssiif aeltseeeks lrepgvednq
      301 nnglvnysss vvardagdfe sslelresdv tdgssrpivg rrlplrhnsd peenftstee
      361 sseenlnmlg qtevqyrlml hiqmqlcels lwdwiaerdg rgrqsaeesa chhkqekset
      421 rgpsrgmttn cnvvswmesw nrkrtlgpyv masvatkifq elvegvfyih nmgivhrdlk
      481 prniflhgpd qqvkigdfgl acadiiqkst dwggadgart pthtsrvgtc lyaspeqleg
      541 seydaksdmy slgvillelf qpfgtemera hvltglrsgq ipealskrcp vqakyiqhlt
      601 rknsaqrpsa iqllqselfq nsgnvnltlq mkileqekei qelrkqlsll sqnkgvkgdr
      661 rdggvpi
//
LOCUS       XP_061009711             632 aa            linear   MAM 02-DEC-2023
DEFINITION  eukaryotic translation initiation factor 2-alpha kinase 1 isoform
            X5 [Dama dama].
ACCESSION   XP_061009711
VERSION     XP_061009711.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153728.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..632
                     /product="eukaryotic translation initiation factor 2-alpha
                     kinase 1 isoform X5"
                     /calculated_mol_wt=70330
     Region          160..582
                     /region_name="STKc_EIF2AK1_HRI"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     eukaryotic translation Initiation Factor 2-Alpha Kinase 2
                     or Heme-Regulated Inhibitor kinase; cd14049"
                     /db_xref="CDD:270951"
     Site            order(160..162,165..166,212..213,216..217,219..220,
                     228..236,238,381,433,436..438)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:270951"
     Site            order(173..174,179,181,194,196,385..388,391,447..448,450,
                     462,494..496,527,529..536)
                     /site_type="active"
                     /db_xref="CDD:270951"
     Site            order(173..174,179,181,194,196,227,385..388,391,443,445,
                     447..448,450,462)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270951"
     Site            order(461..470,485..496)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270951"
     Site            order(494..496,527,529..536)
                     /site_type="other"
                     /note="eIF2alpha (substrate) binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270951"
     CDS             1..632
                     /gene="EIF2AK1"
                     /coded_by="XM_061153728.1:60..1958"
                     /db_xref="GeneID:133063841"
ORIGIN      
        1 mlggvsgaae reaegdaaga vpappaidfp aegsdpkyde sdvpaelqvl kgplqqptfp
       61 favanqlllv sllehlshvh epnplrsrqv fkllcqtfik mgllssftcs defsslrlhh
      121 nraithlmrs akervrqgpc ednshiqkir arevafeaqt srylnefeel avlgkggygr
      181 vykvrnkldg qyyaikkili kgatktdcmk vlrevkvlag lqhpnivgyh tawiehvhva
      241 hrqadrlslq lpslevisdq kdpsthyevk sdgsnsssii faeltseeek slrepgvedn
      301 qnnglvnyss svvardagdf esslelresd vtdgssrpiv grrlplrhns dpeenftste
      361 esseenlnml gqtevqyrlm lhiqmqlcel slwdwiaerd grgrqsaees acpyvmasva
      421 tkifqelveg vfyihnmgiv hrdlkprnif lhgpdqqvki gdfglacadi iqkstdwgga
      481 dgartpthts rvgtclyasp eqlegseyda ksdmyslgvi llelfqpfgt emerahvltg
      541 lrsgqipeal skrcpvqaky iqhltrknsa qrpsaiqllq selfqnsgnv nltlqmkile
      601 qekeiqelrk qlsllsqnkg vkgdrrdggv pi
//
LOCUS       XP_061009712             631 aa            linear   MAM 02-DEC-2023
DEFINITION  eukaryotic translation initiation factor 2-alpha kinase 1 isoform
            X6 [Dama dama].
ACCESSION   XP_061009712
VERSION     XP_061009712.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153729.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..631
                     /product="eukaryotic translation initiation factor 2-alpha
                     kinase 1 isoform X6"
                     /calculated_mol_wt=70259
     Region          160..581
                     /region_name="STKc_EIF2AK1_HRI"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     eukaryotic translation Initiation Factor 2-Alpha Kinase 2
                     or Heme-Regulated Inhibitor kinase; cd14049"
                     /db_xref="CDD:270951"
     Site            order(160..162,165..166,212..213,216..217,219..220,
                     228..236,238,380,432,435..437)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:270951"
     Site            order(173..174,179,181,194,196,384..387,390,446..447,449,
                     461,493..495,526,528..535)
                     /site_type="active"
                     /db_xref="CDD:270951"
     Site            order(173..174,179,181,194,196,227,384..387,390,442,444,
                     446..447,449,461)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270951"
     Site            order(460..469,484..495)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270951"
     Site            order(493..495,526,528..535)
                     /site_type="other"
                     /note="eIF2alpha (substrate) binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270951"
     CDS             1..631
                     /gene="EIF2AK1"
                     /coded_by="XM_061153729.1:60..1955"
                     /db_xref="GeneID:133063841"
ORIGIN      
        1 mlggvsgaae reaegdaaga vpappaidfp aegsdpkyde sdvpaelqvl kgplqqptfp
       61 favanqlllv sllehlshvh epnplrsrqv fkllcqtfik mgllssftcs defsslrlhh
      121 nraithlmrs akervrqgpc ednshiqkir arevafeaqt srylnefeel avlgkggygr
      181 vykvrnkldg qyyaikkili kgatktdcmk vlrevkvlag lqhpnivgyh tawiehvhva
      241 hrqdrlslql pslevisdqk dpsthyevks dgsnsssiif aeltseeeks lrepgvednq
      301 nnglvnysss vvardagdfe sslelresdv tdgssrpivg rrlplrhnsd peenftstee
      361 sseenlnmlg qtevqyrlml hiqmqlcels lwdwiaerdg rgrqsaeesa cpyvmasvat
      421 kifqelvegv fyihnmgivh rdlkprnifl hgpdqqvkig dfglacadii qkstdwggad
      481 gartpthtsr vgtclyaspe qlegseydak sdmyslgvil lelfqpfgte merahvltgl
      541 rsgqipeals krcpvqakyi qhltrknsaq rpsaiqllqs elfqnsgnvn ltlqmkileq
      601 ekeiqelrkq lsllsqnkgv kgdrrdggvp i
//
LOCUS       XP_061009713             704 aa            linear   MAM 02-DEC-2023
DEFINITION  forkhead box protein K1 [Dama dama].
ACCESSION   XP_061009713
VERSION     XP_061009713.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153730.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..704
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..704
                     /product="forkhead box protein K1"
                     /calculated_mol_wt=73097
     Region          84..186
                     /region_name="FHA_FOXK1"
                     /note="forkhead associated (FHA) domain found in forkhead
                     box protein K1 (FOXK1) and similar proteins; cd22722"
                     /db_xref="CDD:438774"
     Site            order(107..108,126..127,129,145,147..148)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438774"
     Region          283..383
                     /region_name="FH_FOXK1"
                     /note="Forkhead (FH) domain found in Forkhead box protein
                     K1 (FOXK1) and similar proteins; cd20054"
                     /db_xref="CDD:410828"
     Site            order(285,288..290,308..309,312,327,331..332,334..335,
                     338..339,345,353,355..357,359,377,380)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410828"
     Region          <388..696
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..704
                     /gene="FOXK1"
                     /coded_by="XM_061153730.1:1..2115"
                     /db_xref="GeneID:133063842"
ORIGIN      
        1 maevgedgga rallalrsap cspvlcaaaf ppaapaaaps ppppaqpppp ppppppgaia
       61 ggaagaagea lvaaaaasvr rspgpalarl egrefeflmr qpsvtigrns sqgsvdlsmg
      121 lssfisrrhl qlsfqephfy lrclgkngvf vdgafqrrga palqlpkqct frfpstaiki
      181 qftslyhqee apasplrply pqisplkihi pepdlrslvs pipsptgtis vpnscpaspr
      241 gagsssyrsv qnvtsdlqla aeyaaraaeq qadtsggdsp kdeskppysy aqlivqaiss
      301 aqdrqltlsg iyahitkhyp yyrtadkgwq nsirhnlsln ryfikvprsq eepgkgsfwr
      361 idpasetklv eqafrkrrqr gvscfrtpfg plssrsapas pthpglmspr ssglqtpecl
      421 sregspiphd pdfgaklasv peyrysqsap gspvsaqpvi mavpprppsl vakpvaympa
      481 sivtaqqpsg haihvvqqap pvtmlrvvtt sassangyil asqaaaggah eaagtavldl
      541 gseargleek ptialatipa asrviqtvas qmapgvpght vailqpatpv tlgqhhlpir
      601 avtqngkhav ptsslagnay altsplqlla aqassstpvv vtrvcevgpe epaatstapp
      661 taastsptge pevkrsrvee pvgtvtaqag vmaaagtqgp gtge
//
LOCUS       XP_061009714             699 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 12 isoform X1 [Dama dama].
ACCESSION   XP_061009714
VERSION     XP_061009714.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153731.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..699
                     /product="zinc finger protein 12 isoform X1"
                     /calculated_mol_wt=81215
     Region          11..71
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          273..293
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          297..685
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          301..321
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          329..349
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(334,336,338,340..341,344..345,348,362,364,368..369,
                     372..373,376,390,392,394,396..397,400..401,404)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          357..377
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(357,360,373,377)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          385..405
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          413..433
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(418,420,422,424..425,428..429,432,446,448,452..453,
                     456..457,460,474,476,478,480..481,484..485,488)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          441..461
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(441,444,457,461)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          469..489
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          497..517
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(497,500,513,517)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          525..545
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(530,532,534,536..537,540..541,544,558,560,564..565,
                     568..569,572,586,588,590,592..593,596..597,600)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          553..573
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(553,556,569,573)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          581..601
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          609..629
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(609,612,625,629)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          637..657
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          665..685
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..699
                     /gene="ZNF12"
                     /coded_by="XM_061153731.1:506..2605"
                     /db_xref="GeneID:133063843"
ORIGIN      
        1 msrswdrtgs vsfrdvavdf tqeewqhldp eqkttyrdvm lenyshlisv gchiikpevi
       61 tkleqgeepw vvegefllqs rpeevwkvhd lmegsqened khsrqtesin nktlpegrgn
      121 glgktcnvet ssvpsrkipy qcdscekslk siseyissdg syarmkpdec sacgrsllhv
      181 klekthlgdk pyefnqnget yalngesiyq nihilekpfe yiecqkafqk dtvfanhiee
      241 kpykwnesei aflqmsnlsv hptthlemkp yecnacgksf ckkskfiihq rthtgekpye
      301 cnqcgksfcq kgtltvhqrt htgekpyect ecgktfyqkl hliqhqrths gekpyecsyc
      361 gkafcqkthl tqhqrthsge rpyvchdcgk tfsqksalnd hqkihtgvkl ykcnecgkcf
      421 crkstltthq rthtgekpye cnecgkffsr lsyltvhyrt hsgekpyecn ecgktfylns
      481 almrhqrvht gekpyecnec gklfsqlsyl tihhrthsgv kpyecnecgk tfyqnsalcr
      541 hrrihkgekp yecyicgkff sqmsyltihh rihsgekpye cnecgktfcq nsalnrhqrt
      601 htgekayecy ecgkffsqms yltihhrihs gekpfecnec gkafsrmsyl tvhyrthsge
      661 kpyectecgk kfyhksafns hqrihrrgnm nvldvgrll
//
LOCUS       XP_061009715             696 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 12 isoform X2 [Dama dama].
ACCESSION   XP_061009715
VERSION     XP_061009715.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153732.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..696
                     /product="zinc finger protein 12 isoform X2"
                     /calculated_mol_wt=80768
     Region          8..68
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          270..290
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          294..682
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          298..318
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          326..346
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(331,333,335,337..338,341..342,345,359,361,365..366,
                     369..370,373,387,389,391,393..394,397..398,401)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          354..374
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(354,357,370,374)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          382..402
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          410..430
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(415,417,419,421..422,425..426,429,443,445,449..450,
                     453..454,457,471,473,475,477..478,481..482,485)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          438..458
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(438,441,454,458)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          466..486
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          494..514
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(494,497,510,514)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          522..542
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(527,529,531,533..534,537..538,541,555,557,561..562,
                     565..566,569,583,585,587,589..590,593..594,597)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          550..570
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(550,553,566,570)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          578..598
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          606..626
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(606,609,622,626)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          634..654
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          662..682
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..696
                     /gene="ZNF12"
                     /coded_by="XM_061153732.1:489..2579"
                     /db_xref="GeneID:133063843"
ORIGIN      
        1 mnqslgsvsf rdvavdftqe ewqhldpeqk ttyrdvmlen yshlisvgch iikpevitkl
       61 eqgeepwvve gefllqsrpe evwkvhdlme gsqenedkhs rqtesinnkt lpegrgnglg
      121 ktcnvetssv psrkipyqcd scekslksis eyissdgsya rmkpdecsac grsllhvkle
      181 kthlgdkpye fnqngetyal ngesiyqnih ilekpfeyie cqkafqkdtv fanhieekpy
      241 kwneseiafl qmsnlsvhpt thlemkpyec nacgksfckk skfiihqrth tgekpyecnq
      301 cgksfcqkgt ltvhqrthtg ekpyectecg ktfyqklhli qhqrthsgek pyecsycgka
      361 fcqkthltqh qrthsgerpy vchdcgktfs qksalndhqk ihtgvklykc necgkcfcrk
      421 stltthqrth tgekpyecne cgkffsrlsy ltvhyrthsg ekpyecnecg ktfylnsalm
      481 rhqrvhtgek pyecnecgkl fsqlsyltih hrthsgvkpy ecnecgktfy qnsalcrhrr
      541 ihkgekpyec yicgkffsqm syltihhrih sgekpyecne cgktfcqnsa lnrhqrthtg
      601 ekayecyecg kffsqmsylt ihhrihsgek pfecnecgka fsrmsyltvh yrthsgekpy
      661 ectecgkkfy hksafnshqr ihrrgnmnvl dvgrll
//
LOCUS       XP_061009716             669 aa            linear   MAM 02-DEC-2023
DEFINITION  diacylglycerol lipase-beta isoform X1 [Dama dama].
ACCESSION   XP_061009716
VERSION     XP_061009716.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153733.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..669
                     /product="diacylglycerol lipase-beta isoform X1"
                     /calculated_mol_wt=73353
     Region          274..507
                     /region_name="Lipase_3"
                     /note="Lipase (class 3). Lipases are esterases that can
                     hydrolyze long-chain acyl-triglycerides into di- and
                     monoglycerides, glycerol, and free fatty acids at a
                     water/lipid interface. A typical feature of lipases is
                     'interfacial activation,' the process of...; cd00519"
                     /db_xref="CDD:238287"
     Site            order(376..377,379..387)
                     /site_type="active"
                     /note="active site flap/lid [active]"
                     /db_xref="CDD:238287"
     CDS             1..669
                     /gene="DAGLB"
                     /coded_by="XM_061153733.1:75..2084"
                     /db_xref="GeneID:133063844"
ORIGIN      
        1 mpgmvlfgrr waiasddlvf pgvfellvrv lwwvgilmly lmhrgkldcp gggllssyli
       61 vllvllavii gtvsaivcvs mkgticnpgp rksmskllyv rlalflpemv waslgaawia
      121 dgvqcdrtvg ngiiatvvvs wliivstvlt ilivfdplgg kaapgtplgp qpldghessq
      181 llsglrtaat gvwetrvrll cccvgrddht rvafsstael fstyfsdtdl vpsdiaagla
      241 llhqqqdhar ssseptevvt hspgsfqead ldaelenchh ymqfaaaayg wplyiyrnpf
      301 tglcrvggdc crrrttdydl vggdqlnchf ssilqttglq hrdfihvsfh dkvyelpflv
      361 aldhrkesvv vavrgtmslq diltdlsaes eplnlecevq dcwahkgisq aaryvyrrlv
      421 ndgilsqafs iapeyrlvvv ghslgagaaa llalmlkrpy pqvrcyafsp prgllsksly
      481 eysktfivsl vlgkdviprl svtnledlkr rilrviahcn kpkykillrg cwyelfggsp
      541 edlpteldgg dltqpllgeh sllahgspay sfsgesples ptrypplypp griihleeeg
      601 asgrcscypa arytvrwshe sefskiligp kmltdhmpdi lmrvldhvvs draaciscpa
      661 rggssvdla
//
LOCUS       XP_061009717             540 aa            linear   MAM 02-DEC-2023
DEFINITION  diacylglycerol lipase-beta isoform X2 [Dama dama].
ACCESSION   XP_061009717
VERSION     XP_061009717.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153734.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..540
                     /product="diacylglycerol lipase-beta isoform X2"
                     /calculated_mol_wt=59246
     Region          214..378
                     /region_name="Lipase_3"
                     /note="Lipase (class 3). Lipases are esterases that can
                     hydrolyze long-chain acyl-triglycerides into di- and
                     monoglycerides, glycerol, and free fatty acids at a
                     water/lipid interface. A typical feature of lipases is
                     'interfacial activation,' the process of...; cd00519"
                     /db_xref="CDD:238287"
     Site            order(247..248,250..258)
                     /site_type="active"
                     /note="active site flap/lid [active]"
                     /db_xref="CDD:238287"
     CDS             1..540
                     /gene="DAGLB"
                     /coded_by="XM_061153734.1:76..1698"
                     /db_xref="GeneID:133063844"
ORIGIN      
        1 mpgmvlfgrr waiasddlvf pgvfellvrv lwwvgilmly lmhrgkldcp gggllssyli
       61 vllvllavii gtvsaivcvs mkgticnpgp rksmskllyv rlalflpemv waslgaawia
      121 dgvqcdrtvg ngiiatvvvr trtwcpvtsr lalpssissr ttpgaprspp rssptppgps
      181 scrrrttdyd lvggdqlnch fssilqttgl qhrdfihvsf hdkvyelpfl valdhrkesv
      241 vvavrgtmsl qdiltdlsae seplnlecev qdcwahkgis qaaryvyrrl vndgilsqaf
      301 siapeyrlvv vghslgagaa allalmlkrp ypqvrcyafs pprgllsksl yeysktfivs
      361 lvlgkdvipr lsvtnledlk rrilrviahc nkpkykillr gcwyelfggs pedlpteldg
      421 gdltqpllge hsllahgspa ysfsgesple sptrypplyp pgriihleee gasgrcscyp
      481 aarytvrwsh esefskilig pkmltdhmpd ilmrvldhvv sdraaciscp arggssvdla
//
LOCUS       XP_061009718             649 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 853 isoform X1 [Dama dama].
ACCESSION   XP_061009718
VERSION     XP_061009718.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153735.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..649
                     /product="zinc finger protein 853 isoform X1"
                     /calculated_mol_wt=72807
     Region          <64..>212
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     Region          484..504
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          484..504
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          508..>561
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          512..532
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(517,519,521,523..524,527..528,531,545,547,551..552,
                     555..556,559,573,575,577,579..580,583..584,587)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          540..560
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(540,543,556,560)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          566..588
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          568..588
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          580..605
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          596..614
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..649
                     /gene="ZNF853"
                     /coded_by="XM_061153735.1:283..2232"
                     /db_xref="GeneID:133063846"
ORIGIN      
        1 mlvpaqpapq dlgltarmkv rratktfvrk prrlkdgslg pdtpsggsgg svsqegengq
       61 erssspprpa vsapkrasev aeetvsgrqk lhtqqskqpp erqphsqgsg pqpesprqqd
      121 greplpqpqp elqeeprsap qgppkprlrl mprqkpsreq prqvrrpsrl rrgrfqrqer
      181 qekpmrvpye qqrqlprpeq peegavreqp ppqdlqqgwp qlpqqevqpl pqgvqqpqqp
      241 qqqeslqpqq eqpqhqgqlq qqllqppppp ppreqlepqr ehlelqqqlq kqqeqlqllq
      301 qqqeqlelll qqlqprppgp qeeeeeevel elmpvdvesd pelerqrqel erqqeqrqlq
      361 lqlqeqlqql ekqleqqlaq ppevqleltp vepgaqppel qleltpvppe lqlelvpaaa
      421 gapaavvvap pgyvvlqelm vlpaaavsap sivavpgppg ggaaltparp prrrrrardr
      481 pticgecgkg fsrstdlvrh qathtgerph rcgecgksfs qhsnlvthqr ihtgekpyac
      541 pycakrfses salvqhqrth tgerpyacgd cgkrfsvssn llrhrrthsg erpyacedcg
      601 erfrhkvqir rherqlhgag rsrglgllrg artaaggtpr aepaadkap
//
LOCUS       XP_061009719             632 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 853 isoform X2 [Dama dama].
ACCESSION   XP_061009719
VERSION     XP_061009719.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153736.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..632
                     /product="zinc finger protein 853 isoform X2"
                     /calculated_mol_wt=71047
     Region          <47..>195
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     Region          467..487
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          467..487
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          491..>544
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          495..515
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(500,502,504,506..507,510..511,514,528,530,534..535,
                     538..539,542,556,558,560,562..563,566..567,570)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          523..543
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(523,526,539,543)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          549..571
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          551..571
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          563..588
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          579..597
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..632
                     /gene="ZNF853"
                     /coded_by="XM_061153736.1:381..2279"
                     /db_xref="GeneID:133063846"
ORIGIN      
        1 mkvrratktf vrkprrlkdg slgpdtpsgg sggsvsqege ngqerssspp rpavsapkra
       61 sevaeetvsg rqklhtqqsk qpperqphsq gsgpqpespr qqdgreplpq pqpelqeepr
      121 sapqgppkpr lrlmprqkps reqprqvrrp srlrrgrfqr qerqekpmrv pyeqqrqlpr
      181 peqpeegavr eqpppqdlqq gwpqlpqqev qplpqgvqqp qqpqqqeslq pqqeqpqhqg
      241 qlqqqllqpp pppppreqle pqrehlelqq qlqkqqeqlq llqqqqeqle lllqqlqprp
      301 pgpqeeeeee velelmpvdv esdpelerqr qelerqqeqr qlqlqlqeql qqlekqleqq
      361 laqppevqle ltpvepgaqp pelqleltpv ppelqlelvp aaagapaavv vappgyvvlq
      421 elmvlpaaav sapsivavpg ppgggaaltp arpprrrrra rdrpticgec gkgfsrstdl
      481 vrhqathtge rphrcgecgk sfsqhsnlvt hqrihtgekp yacpycakrf sessalvqhq
      541 rthtgerpya cgdcgkrfsv ssnllrhrrt hsgerpyace dcgerfrhkv qirrherqlh
      601 gagrsrglgl lrgartaagg tpraepaadk ap
//
LOCUS       XP_061009720             642 aa            linear   MAM 02-DEC-2023
DEFINITION  poly(A) polymerase beta [Dama dama].
ACCESSION   XP_061009720
VERSION     XP_061009720.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153737.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..642
                     /product="poly(A) polymerase beta"
                     /calculated_mol_wt=71493
     Region          22..364
                     /region_name="PAP_central"
                     /note="Poly(A) polymerase central domain; pfam04928"
                     /db_xref="CDD:461486"
     Region          367..496
                     /region_name="PAP_RNA-bind"
                     /note="Poly(A) polymerase predicted RNA binding domain;
                     pfam04926"
                     /db_xref="CDD:461484"
     CDS             1..642
                     /gene="PAPOLB"
                     /coded_by="XM_061153737.1:186..2114"
                     /db_xref="GeneID:133063847"
ORIGIN      
        1 mmpfpvttlg pqrtppppkh ygisspisla ppretdcilt qklietlkpf gvfeeeeelq
       61 rrililekln nlvkewirei seskslpqav ienvggkift fgsyrlgvht kgadidalcv
      121 aprhvdrsdf ftsfydklkl heevkdlrav eeafvpvikl cfdgieidil farlalqtip
      181 edldlrddsl lknldircir slngcrvtde ilhlvpnidn frltlraikl wakchniysn
      241 ilgflggvsw amlvartcql ypnaiastlv rkfflvfsew ewpnpvllke peernlnlpv
      301 wdprvnpsdr yhlmpiitpa ypqqnstynv svstrmvmie efkqglaith eillskaews
      361 klfeapsffq kykhyivlla saptekqhle wvglveskir ilvgslekne fitlahvnpq
      421 sfpapkespd keefrtmwvi glvlkkpens evlsidltyd iqsftdtvyr qainskmfem
      481 dmkiaamhlk rkelhqllpn hvlqkkktvs tegvrltald dssldlsvdg enstpvlslp
      541 aasktgpvtg stqgrnsaap aaaaasvtgi qfpevssqqa npsdspggpp sesipqtasq
      601 pavppapkpm vtrvvsstrl vshpprpsgs aaasianpiv gv
//
LOCUS       XP_061009721             523 aa            linear   MAM 02-DEC-2023
DEFINITION  equilibrative nucleoside transporter 4 [Dama dama].
ACCESSION   XP_061009721
VERSION     XP_061009721.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153738.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..523
                     /product="equilibrative nucleoside transporter 4"
                     /calculated_mol_wt=56972
     Region          74..496
                     /region_name="Nucleoside_tran"
                     /note="Nucleoside transporter; cl15430"
                     /db_xref="CDD:472807"
     CDS             1..523
                     /gene="SLC29A4"
                     /coded_by="XM_061153738.1:339..1910"
                     /db_xref="GeneID:133063848"
ORIGIN      
        1 mgsvgsqrpr easvastphg svvmsfsfdg ghleeavaga tqaqggrtrg ipiftdseep
       61 vpddryhaiy famllagvgf llpynsfitd vdylhhkypg tsivfdmslt yilvalvavl
      121 lnnalverls lhtritagyl lalgpllfis icdvwlqlfs rdqayainla avgtvafgct
      181 vqqssfygyt gmlpkrytqg vmtgestagv mvslsriltk lllpderagt lifflvsagl
      241 ellcfllhll vrgsrfvlyh tarprhcrps rragyrvhhd vaagdvhfeh qgpalanggs
      301 pkdspahevt gggaytrfdv prprirrswp sfralllhry vvarviwadm lsiavtyfit
      361 lclfpglese irhcilgewl pillmavfnl sdfvgkilaa lpmdwrgthl lacsclrvvf
      421 iplfilcvyp sgtpalrhpa wpcvlsllmg isngyfgsvp milaagkvgp kqrelagntm
      481 tvsymtgltl gsavayctys ltrdahrscl rpsatnasfp vgl
//
LOCUS       XP_061009722             523 aa            linear   MAM 02-DEC-2023
DEFINITION  equilibrative nucleoside transporter 4 [Dama dama].
ACCESSION   XP_061009722
VERSION     XP_061009722.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153739.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..523
                     /product="equilibrative nucleoside transporter 4"
                     /calculated_mol_wt=56972
     Region          74..496
                     /region_name="Nucleoside_tran"
                     /note="Nucleoside transporter; cl15430"
                     /db_xref="CDD:472807"
     CDS             1..523
                     /gene="SLC29A4"
                     /coded_by="XM_061153739.1:350..1921"
                     /db_xref="GeneID:133063848"
ORIGIN      
        1 mgsvgsqrpr easvastphg svvmsfsfdg ghleeavaga tqaqggrtrg ipiftdseep
       61 vpddryhaiy famllagvgf llpynsfitd vdylhhkypg tsivfdmslt yilvalvavl
      121 lnnalverls lhtritagyl lalgpllfis icdvwlqlfs rdqayainla avgtvafgct
      181 vqqssfygyt gmlpkrytqg vmtgestagv mvslsriltk lllpderagt lifflvsagl
      241 ellcfllhll vrgsrfvlyh tarprhcrps rragyrvhhd vaagdvhfeh qgpalanggs
      301 pkdspahevt gggaytrfdv prprirrswp sfralllhry vvarviwadm lsiavtyfit
      361 lclfpglese irhcilgewl pillmavfnl sdfvgkilaa lpmdwrgthl lacsclrvvf
      421 iplfilcvyp sgtpalrhpa wpcvlsllmg isngyfgsvp milaagkvgp kqrelagntm
      481 tvsymtgltl gsavayctys ltrdahrscl rpsatnasfp vgl
//
LOCUS       XP_061009723             523 aa            linear   MAM 02-DEC-2023
DEFINITION  equilibrative nucleoside transporter 4 [Dama dama].
ACCESSION   XP_061009723
VERSION     XP_061009723.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153740.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..523
                     /product="equilibrative nucleoside transporter 4"
                     /calculated_mol_wt=56972
     Region          74..496
                     /region_name="Nucleoside_tran"
                     /note="Nucleoside transporter; cl15430"
                     /db_xref="CDD:472807"
     CDS             1..523
                     /gene="SLC29A4"
                     /coded_by="XM_061153740.1:88..1659"
                     /db_xref="GeneID:133063848"
ORIGIN      
        1 mgsvgsqrpr easvastphg svvmsfsfdg ghleeavaga tqaqggrtrg ipiftdseep
       61 vpddryhaiy famllagvgf llpynsfitd vdylhhkypg tsivfdmslt yilvalvavl
      121 lnnalverls lhtritagyl lalgpllfis icdvwlqlfs rdqayainla avgtvafgct
      181 vqqssfygyt gmlpkrytqg vmtgestagv mvslsriltk lllpderagt lifflvsagl
      241 ellcfllhll vrgsrfvlyh tarprhcrps rragyrvhhd vaagdvhfeh qgpalanggs
      301 pkdspahevt gggaytrfdv prprirrswp sfralllhry vvarviwadm lsiavtyfit
      361 lclfpglese irhcilgewl pillmavfnl sdfvgkilaa lpmdwrgthl lacsclrvvf
      421 iplfilcvyp sgtpalrhpa wpcvlsllmg isngyfgsvp milaagkvgp kqrelagntm
      481 tvsymtgltl gsavayctys ltrdahrscl rpsatnasfp vgl
//
LOCUS       XP_061009724             511 aa            linear   MAM 02-DEC-2023
DEFINITION  brain-specific angiogenesis inhibitor 1-associated protein 2-like
            protein 1 [Dama dama].
ACCESSION   XP_061009724
VERSION     XP_061009724.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153741.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..511
                     /product="brain-specific angiogenesis inhibitor
                     1-associated protein 2-like protein 1"
                     /calculated_mol_wt=56727
     Region          6..231
                     /region_name="I-BAR_IMD_BAIAP2L1"
                     /note="Inverse (I)-BAR, also known as the IRSp53/MIM
                     homology Domain (IMD), of Brain-specific Angiogenesis
                     Inhibitor 1-Associated Protein 2-Like 1; cd07645"
                     /db_xref="CDD:153329"
     Site            order(14..15,23,26..27,30,33..34,37,40..41,43..44,48,
                     50..51,54..55,57..58,61..62,71,75,82,85,183,186..187,
                     189..190,193..194,196..197,200..201,204,207..208,211,215,
                     218,225..226,228..229)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153329"
     Region          342..399
                     /region_name="SH3_BAIAP2L1"
                     /note="Src Homology 3 domain of Brain-specific
                     Angiogenesis Inhibitor 1-Associated Protein 2-Like 1, also
                     called Insulin Receptor Tyrosine Kinase Substrate (IRTKS);
                     cd11913"
                     /db_xref="CDD:212846"
     Site            order(347..348,350,357..358,370..371,376..378,380,
                     390..391,393..396)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212846"
     Region          <495..510
                     /region_name="WH2"
                     /note="Wiskott-Aldrich Syndrome Homology (WASP) region 2
                     (WH2 motif), and similar proteins; cl41728"
                     /db_xref="CDD:425359"
     CDS             1..511
                     /gene="BAIAP2L1"
                     /coded_by="XM_061153741.1:185..1720"
                     /db_xref="GeneID:133063849"
ORIGIN      
        1 msrgpeevnr ltestyrnvl eqfnpglrnl inlgknyeka vnamilagra yydgvakige
       61 iatgspvste lghvlieiss ihkklndsld enfkkfhkei iyelekktel dvkymnatlk
      121 ryqaehrhrl dsleksqael kkirrksqgg rnpfkyeske teyvetitsr qneiqkfiad
      181 gckealleek rrfcflvdkh csfssqihhy htqsaelins klprwqetcg dvtkvpekim
      241 nmieeiktpv stpmsgtplp spmverssvv gqdcdslsky ppkipaapsa raltsplidl
      301 fknpatvtqn serknnltgs sfdpnlprsv smasglnmvk kqkvktifph taganqtlls
      361 faqgdvitll iseekdgwly gehdstkmrg wfpssytkll geneeeavse pvpslvpvrs
      421 vsttnlaeks svvipppdyl eclstgaata ekgdislkas nhkapapkpe stppnnangf
      481 akppflsgen pfatvklrpt vtndrsapii r
//
LOCUS       XP_061009725             480 aa            linear   MAM 02-DEC-2023
DEFINITION  vacuolar fusion protein CCZ1 homolog [Dama dama].
ACCESSION   XP_061009725
VERSION     XP_061009725.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153742.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..480
                     /product="vacuolar fusion protein CCZ1 homolog"
                     /calculated_mol_wt=55291
     Region          22..148
                     /region_name="Intu_longin_1"
                     /note="First Longin domain of INTU, CCZ1 and HPS4;
                     pfam19031"
                     /db_xref="CDD:436911"
     Region          218..345
                     /region_name="Intu_longin_2"
                     /note="Intu longin-like domain 2; pfam19032"
                     /db_xref="CDD:465951"
     Region          370..468
                     /region_name="Intu_longin_3"
                     /note="Intu longin-like domain 3; pfam19033"
                     /db_xref="CDD:436913"
     CDS             1..480
                     /gene="CCZ1"
                     /coded_by="XM_061153742.1:72..1514"
                     /db_xref="GeneID:133063850"
ORIGIN      
        1 maaaaagaga gaaqekqfpp allsffiynp rfgpregeee nkilfyypne veknekirnv
       61 glceaivqft rtfspskpak slhtqknrqf fnepeenfwm vmvvrnpiie kqskdgkpvv
      121 eyqeeelldk vyssvlqqcy smyklfngtf lramedggvk llkerlekff hrylqtlhlq
      181 scdlldifgg isffpldkmt ylkiqsfinr veeslsivky taflyndqli wsgleqddmr
      241 ilykylttsl fprhiepela grdspiraem pgnlqhygrf ltgplnlndp eakcrfpkif
      301 vntddtyeal hlivykamsa avcfmidasi qptldfcrrl dsvvgpqltv lasdiceqfn
      361 inkrvsgsek epqfkfiyfn hmnlaeksti hmrktpsvsl tsvhpdlmki lgdinsdftr
      421 vdedeeiivk amsdywvvgk ksdqrelyvi lnqknanlie vneevkklca tqfnniffld
//
LOCUS       XP_061009726             448 aa            linear   MAM 02-DEC-2023
DEFINITION  integrator complex subunit 15 [Dama dama].
ACCESSION   XP_061009726
VERSION     XP_061009726.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153743.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..448
                     /product="integrator complex subunit 15"
                     /calculated_mol_wt=49581
     Region          2..380
                     /region_name="DUF4507"
                     /note="Domain of unknown function (DUF4507); pfam14964"
                     /db_xref="CDD:464409"
     CDS             1..448
                     /gene="INTS15"
                     /coded_by="XM_061153743.1:53..1399"
                     /db_xref="GeneID:133063851"
ORIGIN      
        1 msdirhsllr rdalsaakev lyhldiyfss qlqsaplpiv dkgpvellee fvfqvpkerg
       61 aqpkrlnslq elqlleimcn yfqeqtkdsv rqiifsslfs pqgnkaddsr msllgklvsm
      121 avavcripvl ecaaswlqrt pvvycvrlar alvddycclv pgsvqtlkqi fsasprfccq
      181 fitsvtalyd lssddlippl dllemivnwi ledprlilit flntpiaanl pigfleltpl
      241 tglirwcvka plahkrkkkt planghvaak vpkalggadr dphllysklh lsvlqvllml
      301 qvhlteknly grlglvlfdh mvplveevnr ladelnplna sqeielaldr laqalqvama
      361 sgallctrdd lrtlcsrlph nnllqlvisg pvqqsphtal ppgfyphiht pplgygavpa
      421 hpaahpalpt hpghtfisgm tfpfrpih
//
LOCUS       XP_061009727             436 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat domain phosphoinositide-interacting protein 2 isoform X1
            [Dama dama].
ACCESSION   XP_061009727
VERSION     XP_061009727.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153744.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..436
                     /product="WD repeat domain phosphoinositide-interacting
                     protein 2 isoform X1"
                     /calculated_mol_wt=47330
     Region          102..138
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <118..342
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          143..182
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          188..228
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          233..268
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          276..309
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..436
                     /gene="WIPI2"
                     /coded_by="XM_061153744.1:83..1393"
                     /db_xref="GeneID:133063852"
ORIGIN      
        1 mnlasqsgea gasqllfanf nqdvtslavg sksgykffsl ssvdkleqiy ectdtedvci
       61 verlfssslv aivslkaprk lkvchfkkgt eicnysysnt ilavklnrqr livcleesly
      121 ihnirdmkvl htiretppnp tglcalsinn dncylaypgs atigevqvfd tinlraanmi
      181 pahdsplaal afdasgtkla tasekgtvir vfsipegqkl fefrrgvkrc vsicslafsm
      241 dgmflsassn tetvhifkle tvkekpqeep ttwtgyfgkv lmastsylps qvtemfnqgr
      301 afatvrlpfc ghknicalat iqkiprllvg asdgylymyn ldpqeggect lmkqhqldgs
      361 mettneilds tsqdcplvaq aysaavakgp lapssptala ytdelgaagg sgledeasal
      421 rleddsehpp milrtd
//
LOCUS       XP_061009728             310 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat domain phosphoinositide-interacting protein 2 isoform X2
            [Dama dama].
ACCESSION   XP_061009728
VERSION     XP_061009728.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153745.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..310
                     /product="WD repeat domain phosphoinositide-interacting
                     protein 2 isoform X2"
                     /calculated_mol_wt=33284
     Region          <2..216
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          17..56
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          62..102
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          107..142
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          150..183
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..310
                     /gene="WIPI2"
                     /coded_by="XM_061153745.1:192..1124"
                     /db_xref="GeneID:133063852"
ORIGIN      
        1 mkvlhtiret ppnptglcal sinndncyla ypgsatigev qvfdtinlra anmipahdsp
       61 laalafdasg tklatasekg tvirvfsipe gqklfefrrg vkrcvsicsl afsmdgmfls
      121 assntetvhi fkletvkekp qeepttwtgy fgkvlmasts ylpsqvtemf nqgrafatvr
      181 lpfcghknic alatiqkipr llvgasdgyl ymynldpqeg gectlmkqhq ldgsmettne
      241 ildstsqdcp lvaqaysaav akgplapssp talaytdelg aaggsglede asalrledds
      301 ehppmilrtd
//
LOCUS       XP_061009729             400 aa            linear   MAM 02-DEC-2023
DEFINITION  cytohesin-3 [Dama dama].
ACCESSION   XP_061009729
VERSION     XP_061009729.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153746.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..400
                     /product="cytohesin-3"
                     /calculated_mol_wt=46246
     Region          67..249
                     /region_name="Sec7"
                     /note="Sec7 domain; pfam01369"
                     /db_xref="CDD:460178"
     Region          264..383
                     /region_name="PH_GRP1-like"
                     /note="General Receptor for Phosphoinositides-1-like
                     Pleckstrin homology (PH) domain; cd01252"
                     /db_xref="CDD:269954"
     Site            order(264,291,293,295,305,308,310,341..343,345,348..353,
                     383)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:269954"
     Site            order(274,277,281,283,285,296,306,344,355..356)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:269954"
     CDS             1..400
                     /gene="CYTH3"
                     /coded_by="XM_061153746.1:63..1265"
                     /db_xref="GeneID:133063854"
ORIGIN      
        1 mdedggggeg ggvpedlsle ereelldirr rkkeliddie rlkyeiaevm teidnltsve
       61 eskttqrnkq iamgrkkfnm dpkkgiqfli endllqsspe dvaqflykge glnktvigdy
      121 lgerdefnik vlqafvelhe fadlnlvqal rqflwsfrlp geaqkidrmm eafaaryclc
      181 npgvfqstdt cyvlsfaiim lntslhnhnv rdkptaerfv tmnrginegg dlpeellrnl
      241 yesiknepfk ipeddgndlt htffnpdreg wllklggrvk twkrrwfilt dnclyyfeyt
      301 tdkeprgiip lenlsireve dprkpncfel ynpshkgqvi kackteadgr vvegnhvvyr
      361 isapspeeke ewmksirasi srdpfydmla trkrriankk
//
LOCUS       XP_061009730             394 aa            linear   MAM 02-DEC-2023
DEFINITION  palmitoyltransferase ZDHHC4 isoform X1 [Dama dama].
ACCESSION   XP_061009730
VERSION     XP_061009730.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153747.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..394
                     /product="palmitoyltransferase ZDHHC4 isoform X1"
                     /calculated_mol_wt=45167
     Region          182..343
                     /region_name="DHHC"
                     /note="DHHC palmitoyltransferase; pfam01529"
                     /db_xref="CDD:396215"
     CDS             1..394
                     /gene="ZDHHC4"
                     /coded_by="XM_061153747.1:196..1380"
                     /db_xref="GeneID:133063855"
ORIGIN      
        1 mfggempelp aegypdkrnn vgwgpritsp rmdflvlfll ylalvllgfv micigskthy
       61 lqgltsrgaq ifsyiipecl qrvmlrvlhy lfhtrnntfv ilhlilqgmv yteytweifg
      121 lcqqlefsly ylflpyllli vnlvffaltc vtnpgtitka nellflpvye fdevmfpknv
      181 rcptcdlrkp arskhcsvcn rcvhrfdhhc vwvnncigaw ntryflcylw tltasaatma
      241 vvstvflvrl avmsdvylqt yvddlghlqv vdtvflvqvt aaqvtalrav cgtapaikyl
      301 fltfprivfl vgfvmvlsfl lggylcfcly laatnqttne wykgdrawcq qcphvarppa
      361 veprayrnih srglwgnlre iflpatarye rkkk
//
LOCUS       XP_061009731             374 aa            linear   MAM 02-DEC-2023
DEFINITION  palmitoyltransferase ZDHHC4 isoform X2 [Dama dama].
ACCESSION   XP_061009731
VERSION     XP_061009731.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153748.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..374
                     /product="palmitoyltransferase ZDHHC4 isoform X2"
                     /calculated_mol_wt=43243
     Region          182..323
                     /region_name="DHHC"
                     /note="DHHC palmitoyltransferase; pfam01529"
                     /db_xref="CDD:396215"
     CDS             1..374
                     /gene="ZDHHC4"
                     /coded_by="XM_061153748.1:196..1320"
                     /db_xref="GeneID:133063855"
ORIGIN      
        1 mfggempelp aegypdkrnn vgwgpritsp rmdflvlfll ylalvllgfv micigskthy
       61 lqgltsrgaq ifsyiipecl qrvmlrvlhy lfhtrnntfv ilhlilqgmv yteytweifg
      121 lcqqlefsly ylflpyllli vnlvffaltc vtnpgtitka nellflpvye fdevmfpknv
      181 rcptcdlrkp arskhcsvcn rcvhrfdhhc vwvnncigaw ntryflcylw tltasaatma
      241 vvstvflvrl avmsdvylqt yvddlghlqv vdtvflvqyl fltfprivfl vgfvmvlsfl
      301 lggylcfcly laatnqttne wykgdrawcq qcphvarppa veprayrnih srglwgnlre
      361 iflpatarye rkkk
//
LOCUS       XP_061009732             363 aa            linear   MAM 02-DEC-2023
DEFINITION  palmitoyltransferase ZDHHC4 isoform X3 [Dama dama].
ACCESSION   XP_061009732
VERSION     XP_061009732.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153749.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..363
                     /product="palmitoyltransferase ZDHHC4 isoform X3"
                     /calculated_mol_wt=41725
     Region          151..312
                     /region_name="DHHC"
                     /note="DHHC palmitoyltransferase; pfam01529"
                     /db_xref="CDD:396215"
     CDS             1..363
                     /gene="ZDHHC4"
                     /coded_by="XM_061153749.1:173..1264"
                     /db_xref="GeneID:133063855"
ORIGIN      
        1 mdflvlflly lalvllgfvm icigskthyl qgltsrgaqi fsyiipeclq rvmlrvlhyl
       61 fhtrnntfvi lhlilqgmvy teytweifgl cqqlefslyy lflpyllliv nlvffaltcv
      121 tnpgtitkan ellflpvyef devmfpknvr cptcdlrkpa rskhcsvcnr cvhrfdhhcv
      181 wvnncigawn tryflcylwt ltasaatmav vstvflvrla vmsdvylqty vddlghlqvv
      241 dtvflvqvta aqvtalravc gtapaikylf ltfprivflv gfvmvlsfll ggylcfclyl
      301 aatnqttnew ykgdrawcqq cphvarppav eprayrnihs rglwgnlrei flpataryer
      361 kkk
//
LOCUS       XP_061009733             375 aa            linear   MAM 02-DEC-2023
DEFINITION  actin, cytoplasmic 1 [Dama dama].
ACCESSION   XP_061009733
VERSION     XP_061009733.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153750.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..375
                     /product="actin, cytoplasmic 1"
                     /calculated_mol_wt=41606
     Region          6..370
                     /region_name="ASKHA_NBD_actin"
                     /note="nucleotide-binding domain (NBD) of actin and
                     similar proteins; cd10224"
                     /db_xref="CDD:466823"
     CDS             1..375
                     /gene="ACTB"
                     /coded_by="XM_061153750.1:129..1256"
                     /db_xref="GeneID:133063856"
ORIGIN      
        1 mdddiaalvv dngsgmckag fagddaprav fpsivgrprh qgvmvgmgqk dsyvgdeaqs
       61 krgiltlkyp iehgivtnwd dmekiwhhtf ynelrvapee hpvllteapl npkanrekmt
      121 qimfetfntp amyvaiqavl slyasgrttg ivmdsgdgvt htvpiyegya lphailrldl
      181 agrdltdylm kiltergysf tttaereivr dikeklcyva ldfeqemata assssleksy
      241 elpdgqviti gnerfrcpea lfqpsflgme scgihettfn simkcdvdir kdlyantvls
      301 ggttmypgia drmqkeital apstmkikii apperkysvw iggsilasls tfqqmwiskq
      361 eydesgpsiv hrkcf
//
LOCUS       XP_061009734             493 aa            linear   MAM 02-DEC-2023
DEFINITION  fascin [Dama dama].
ACCESSION   XP_061009734
VERSION     XP_061009734.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153751.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..493
                     /product="fascin"
                     /calculated_mol_wt=54652
     Region          11..138
                     /region_name="beta-trefoil_FSCN1_rpt1"
                     /note="first fascin-like domain, beta-trefoil fold, found
                     in fascin and similar proteins; cd23344"
                     /db_xref="CDD:467452"
     Site            order(11,14,16,48,50,60,62,93,101,103,134)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:467452"
     Site            order(40..42,45,137)
                     /site_type="other"
                     /note="putative actin-binding site [polypeptide binding]"
                     /db_xref="CDD:467452"
     Region          139..258
                     /region_name="beta-trefoil_FSCN1_rpt2"
                     /note="second fascin-like domain, beta-trefoil fold, found
                     in fascin and similar proteins; cd23348"
                     /db_xref="CDD:467456"
     Site            214..218
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:467456"
     Region          260..382
                     /region_name="beta-trefoil_FSCN-like"
                     /note="fascin-like domain, beta-trefoil fold, found in the
                     fascin-like family; cl49611"
                     /db_xref="CDD:483951"
     Region          383..493
                     /region_name="beta-trefoil_FSCN1_rpt4"
                     /note="fourth fascin-like domain, beta-trefoil fold, found
                     in fascin and similar proteins; cd23356"
                     /db_xref="CDD:467464"
     Site            order(383..384,416,418,421,423,452..453)
                     /site_type="other"
                     /note="putative actin-binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:467464"
     Site            389..393
                     /site_type="other"
                     /note="putative actin-binding site 1 [polypeptide
                     binding]"
                     /db_xref="CDD:467464"
     CDS             1..493
                     /gene="FSCN1"
                     /coded_by="XM_061153751.1:107..1588"
                     /db_xref="GeneID:133063857"
ORIGIN      
        1 mtangtaeal qiqfglincn nkyltaetfg fkvnasassl kkkqiwtleq ppdeagsaav
       61 clrshlgryl aadkdgnvtc eheapgadcr flivahddgr wslqseahrr yfggtedrls
      121 cfaqtvsqae kwsvhiamhp qvniyslark ryahlgarpa deisvdrdvp wgvdslitla
      181 fqdqryslqt adhrflrhdg rlvahpepat gytlefrsgk vafrdcegry lapsgpsgtl
      241 kagkatkvgk delfaleqsc aqvvlqaane rnvstrqgmd lsanqdeetd qetfqleidr
      301 dtkkcafrth sgkywtlttt ggvqstastk darcyfdiew rdrriilras ngkfvtakkn
      361 gqlaasveta gdselflmkl inrpiivfrg ehgfigcrkv tgtldanrsn ydvfqlefrd
      421 gaynikdstg kywtvgndas vtsssdtpvd fflefcdynk vaikvgghyl kgdhagvlka
      481 cadtidpttl wey
//
LOCUS       XP_061009735             320 aa            linear   MAM 02-DEC-2023
DEFINITION  aminoacyl tRNA synthase complex-interacting multifunctional protein
            2 [Dama dama].
ACCESSION   XP_061009735
VERSION     XP_061009735.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153752.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..320
                     /product="aminoacyl tRNA synthase complex-interacting
                     multifunctional protein 2"
                     /calculated_mol_wt=35257
     Region          1..44
                     /region_name="AIMP2_LysRS_bd"
                     /note="AIMP2 lysyl-tRNA synthetase binding domain;
                     pfam16780"
                     /db_xref="CDD:465269"
     Region          117..208
                     /region_name="Thioredoxin_16"
                     /note="Thioredoxin-like domain; pfam18569"
                     /db_xref="CDD:436585"
     Region          214..309
                     /region_name="GST_C_AIMP2"
                     /note="Glutathione S-transferase C-terminal-like, alpha
                     helical domain of Aminoacyl tRNA synthetase
                     complex-Interacting Multifunctional Protein 2; cd03200"
                     /db_xref="CDD:198309"
     Site            order(230..232,234..239,241..242,255,258,264..265)
                     /site_type="other"
                     /note="putative protein interface 1 [polypeptide binding]"
                     /db_xref="CDD:198309"
     Site            order(263..267,297..298,300..301,305,308..309)
                     /site_type="other"
                     /note="putative protein interface 2 [polypeptide binding]"
                     /db_xref="CDD:198309"
     CDS             1..320
                     /gene="AIMP2"
                     /coded_by="XM_061153752.1:46..1008"
                     /db_xref="GeneID:133063858"
ORIGIN      
        1 mpmyqvkpyh egsgslrvel ptcmyrlpnv hdrtgspaps adhvqeasdp slqalesrqd
       61 dilkrlyelk aavdglskmi qtpdadldvt niiqadepaa lstsavdlnt mlgqdhgalk
      121 divinanpaw pplsllvlhr llcdhfrvls svhthsavrg vpahllqcfg eqtrqrprhe
      181 yqlgftliwk dvpktqmkfs vqtmcpiege gniarflfsl fgqkqdavnl tlidswvdia
      241 ifqlkegssk ekaavfrsmn salgktpwlv gdeltvadvv lwsvlrqtgg cggtvpanvq
      301 kwmracenla afhtalkllq
//
LOCUS       XP_061009736             271 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133063859 [Dama dama].
ACCESSION   XP_061009736
VERSION     XP_061009736.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153753.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..271
                     /product="uncharacterized protein LOC133063859"
                     /calculated_mol_wt=28090
     CDS             1..271
                     /gene="LOC133063859"
                     /coded_by="XM_061153753.1:1486..2301"
                     /db_xref="GeneID:133063859"
ORIGIN      
        1 mralhfcfsd qcclvvswcp gpqggpdsec ykhltpwmtp hvnyavnitk ilvlkahhls
       61 agrratcqdv gkgrwtgcqd rfgrlpvlrs pefclpagcv vvefcrgscl avvvryrgpg
      121 ragvtsskaa vkvpvtsvsg gpggslcagp slcpappgpv peraseppav agrdrsggla
      181 geetcgervl wdrysssqek vgsgnpafkk twknfaakla lqngqgggek vnlkadvteg
      241 psertgsiva pggepgrgle vpggpgtlqa s
//
LOCUS       XP_061009737             246 aa            linear   MAM 02-DEC-2023
DEFINITION  monocyte to macrophage differentiation factor 2 [Dama dama].
ACCESSION   XP_061009737
VERSION     XP_061009737.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153754.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..246
                     /product="monocyte to macrophage differentiation factor 2"
                     /calculated_mol_wt=28502
     Region          34..234
                     /region_name="HlyIII"
                     /note="Haemolysin-III related; cl03831"
                     /db_xref="CDD:470885"
     CDS             1..246
                     /gene="MMD2"
                     /coded_by="XM_061153754.1:75..815"
                     /db_xref="GeneID:133063860"
ORIGIN      
        1 mfaprlldfq ktkyarfmnh rvpahkryqp teyehaanca thalwiipsi lgssnlyfls
       61 dddwetisaw iyglglcglf vvstvfhtis wkkshlrtve hclhmsdrmv iyffiaasya
      121 pwlnlrelgp washmrwlvw imasvgtvyv fffheryklv ellcyvvmgf fpalvvlsmp
      181 ntegiwelvt ggvfyclgmv ffksdgripf ahaiwhlfva fgagthyyai wrylylpsal
      241 qakvsk
//
LOCUS       XP_061009738             212 aa            linear   MAM 02-DEC-2023
DEFINITION  ER lumen protein-retaining receptor 2 [Dama dama].
ACCESSION   XP_061009738
VERSION     XP_061009738.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153755.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..212
                     /product="ER lumen protein-retaining receptor 2"
                     /calculated_mol_wt=24323
     Region          28..169
                     /region_name="ER_lumen_recept"
                     /note="ER lumen protein retaining receptor; pfam00810"
                     /db_xref="CDD:459945"
     CDS             1..212
                     /gene="KDELR2"
                     /coded_by="XM_061153755.1:92..730"
                     /db_xref="GeneID:133063861"
ORIGIN      
        1 mnifrltgdl shlaaivill lkiwktrsca gisgksqllf alvfttryld lftsfislyn
       61 tsmkliyiac syatvyliym kfkatydgnh dtfrveflvv pvgglsflvn hdfspleilw
      121 tfsiylesva ilpqlfmisk tgeaetitth ylfflglyra lylvnwiwrf yfegffdlia
      181 vvagvvqtil ycdffylyit kvlkgkklsl pa
//
LOCUS       XP_061009739             211 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-related C3 botulinum toxin substrate 1 isoform X1 [Dama dama].
ACCESSION   XP_061009739
VERSION     XP_061009739.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153756.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..211
                     /product="ras-related C3 botulinum toxin substrate 1
                     isoform X1"
                     /calculated_mol_wt=23346
     Region          3..195
                     /region_name="Rac1_like"
                     /note="Ras-related C3 botulinum toxin substrate 1 (rho
                     family, small GTP binding protein Rac1)-like consists of
                     Rac1, Rac2 and Rac3; cd01871"
                     /db_xref="CDD:206663"
     Site            order(3,5,31..32,35..36,38..39,41,43,52,56..61,64..67,
                     70..71,73..74)
                     /site_type="other"
                     /note="GEF (guanine nucleotide exchange factor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206663"
     Site            10..17
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206663"
     Site            order(13,15..18,135,137..138,178)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206663"
     Site            order(22,25..26,28,30..31,179,181)
                     /site_type="active"
                     /note="p67PhoxTPR effector interaction site [active]"
                     /db_xref="CDD:206663"
     Site            25..40
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206663"
     Site            order(32,34,36..38,61..64,67,70)
                     /site_type="other"
                     /note="GAP (GTPase-activating protein) interaction site
                     [polypeptide binding]"
                     /db_xref="CDD:206663"
     Site            order(35..36,59,64,66..67,69..70,73,122..123,125)
                     /site_type="other"
                     /note="GDI (guanine nucleotide dissociation inhibitor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206663"
     Site            order(35..37,39,56..58,64,67,70..71,73..74)
                     /site_type="other"
                     /note="Arfaptin/Por effector interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206663"
     Site            35
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206663"
     Site            57..60
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206663"
     Site            order(60..75,95..96)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206663"
     Site            134..137
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206663"
     Site            177..179
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206663"
     CDS             1..211
                     /gene="RAC1"
                     /coded_by="XM_061153756.1:116..751"
                     /db_xref="GeneID:133063863"
ORIGIN      
        1 mqaikcvvvg dgavgktcll isyttnafpg eyiptvfdny sanvmvdgkp vnlglwdtag
       61 qedydrlrpl sypqtvgety gkeipsrgkd kpiadvflic fslvspasfe nvrakwypev
      121 rhhcpntpii lvgtkldlrd dkdtieklke kkltpitypq glamakeiga vkylecsalt
      181 qrglktvfde airavlcppp vkkrkrkcll l
//
LOCUS       XP_061009740             192 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-related C3 botulinum toxin substrate 1 isoform X2 [Dama dama].
ACCESSION   XP_061009740
VERSION     XP_061009740.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153757.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..192
                     /product="ras-related C3 botulinum toxin substrate 1
                     isoform X2"
                     /calculated_mol_wt=21319
     Region          3..176
                     /region_name="Rac1_like"
                     /note="Ras-related C3 botulinum toxin substrate 1 (rho
                     family, small GTP binding protein Rac1)-like consists of
                     Rac1, Rac2 and Rac3; cd01871"
                     /db_xref="CDD:206663"
     Site            order(3,5,31..32,35..36,38..39,41,43,52,56..61,64..67,
                     70..71,73..74)
                     /site_type="other"
                     /note="GEF (guanine nucleotide exchange factor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206663"
     Site            10..17
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206663"
     Site            order(13,15..18,116,118..119,159)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206663"
     Site            order(22,25..26,28,30..31,160,162)
                     /site_type="active"
                     /note="p67PhoxTPR effector interaction site [active]"
                     /db_xref="CDD:206663"
     Site            25..40
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206663"
     Site            order(32,34,36..38,61..64,67,70)
                     /site_type="other"
                     /note="GAP (GTPase-activating protein) interaction site
                     [polypeptide binding]"
                     /db_xref="CDD:206663"
     Site            order(35..36,59,64,66..67,69..70,73,103..104,106)
                     /site_type="other"
                     /note="GDI (guanine nucleotide dissociation inhibitor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206663"
     Site            order(35..37,39,56..58,64,67,70..71,73..74)
                     /site_type="other"
                     /note="Arfaptin/Por effector interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206663"
     Site            35
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206663"
     Site            57..60
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206663"
     Site            60..77
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206663"
     Site            115..118
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206663"
     Site            158..160
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206663"
     CDS             1..192
                     /gene="RAC1"
                     /coded_by="XM_061153757.1:114..692"
                     /db_xref="GeneID:133063863"
ORIGIN      
        1 mqaikcvvvg dgavgktcll isyttnafpg eyiptvfdny sanvmvdgkp vnlglwdtag
       61 qedydrlrpl sypqtdvfli cfslvspasf envrakwype vrhhcpntpi ilvgtkldlr
      121 ddkdtieklk ekkltpityp qglamakeig avkylecsal tqrglktvfd eairavlcpp
      181 pvkkrkrkcl ll
//
LOCUS       XP_061009741             186 aa            linear   MAM 02-DEC-2023
DEFINITION  class A basic helix-loop-helix protein 15 [Dama dama].
ACCESSION   XP_061009741
VERSION     XP_061009741.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153758.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..186
                     /product="class A basic helix-loop-helix protein 15"
                     /calculated_mol_wt=20386
     Region          73..134
                     /region_name="bHLH_TS_MIST1"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     muscle, intestine and stomach expression 1 (MIST-1) and
                     similar proteins; cd19711"
                     /db_xref="CDD:381554"
     Site            order(74,78,80..82,84,89,107..110)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381554"
     Site            order(87..88,91..92,94..95,111,114,118,120..121,125,
                     127..128)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381554"
     CDS             1..186
                     /gene="BHLHA15"
                     /coded_by="XM_061153758.1:132..692"
                     /db_xref="GeneID:133063864"
ORIGIN      
        1 mktksrpprr rappqdpeat paertpdrpp pgsggpdaak alrsrtaraq garaeggrrr
       61 pvpggrress vqrrlesner erqrmhklnn afqalrevip hvradkklsk ietltlakny
      121 iksltatilt mssgrlpgld gpgpklyqhy qqqqqasgga lgvpeappeg hlqkystqih
      181 sfregs
//
LOCUS       XP_061009743             124 aa            linear   MAM 02-DEC-2023
DEFINITION  membrane protein BRI3 [Dama dama].
ACCESSION   XP_061009743
VERSION     XP_061009743.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153760.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..124
                     /product="membrane protein BRI3"
                     /calculated_mol_wt=13429
     Region          29..123
                     /region_name="BRI3"
                     /note="Brain protein I3; pfam10164"
                     /db_xref="CDD:431102"
     CDS             1..124
                     /gene="BRI3"
                     /coded_by="XM_061153760.1:149..523"
                     /db_xref="GeneID:133063865"
ORIGIN      
        1 mdhkpllqer ppaynleagq gefacaphgy gaiaaapppp ypylvtgipt hhprvynihs
       61 rnvtrypans ivvvggcpvc rvgvledsft flgiflaivl fpfgficcfa lrkrrcpncg
      121 anft
//
LOCUS       XP_061009744             109 aa            linear   MAM 02-DEC-2023
DEFINITION  oncomodulin [Dama dama].
ACCESSION   XP_061009744
VERSION     XP_061009744.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153761.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..109
                     /product="oncomodulin"
                     /calculated_mol_wt=11968
     Region          9..109
                     /region_name="EFh_parvalbumin_beta"
                     /note="EF-hand, calcium binding motif, found in
                     beta-parvalbumin; cd16255"
                     /db_xref="CDD:319998"
     Region          9..38
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:319998"
     Region          43..72
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:319998"
     Site            order(52,54,56,60,63,91,93,95,102)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:319998"
     Region          82..109
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:319998"
     CDS             1..109
                     /gene="LOC133063866"
                     /coded_by="XM_061153761.1:68..397"
                     /db_xref="GeneID:133063866"
ORIGIN      
        1 msitdvlsad diaaalqecq dpdtfepqkf fqtsglakms asqvkdvfrf idndqsgyld
       61 eeelkfflqk fesgarelte setkslmaaa dndgdgkiga defqemvhs
//
LOCUS       XP_061009745             217 aa            linear   MAM 02-DEC-2023
DEFINITION  high mobility group protein B1-like, partial [Dama dama].
ACCESSION   XP_061009745
VERSION     XP_061009745.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153762.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         <1..217
                     /product="high mobility group protein B1-like"
     Region          10..78
                     /region_name="HMG-box_HMGB_rpt1"
                     /note="first high mobility group (HMG)-box found in the
                     high mobility group protein B (HMGB) family; cd21978"
                     /db_xref="CDD:438794"
     Site            order(10..12,15,18..19,21..23,27,30,37..38,40..41,43..45,
                     47..48,52)
                     /site_type="other"
                     /note="p53 binding site [polypeptide binding]"
                     /db_xref="CDD:438794"
     Site            order(10,12..13,15..19,22..23,38,40..41,43..45,48,51)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438794"
     Region          96..165
                     /region_name="HMG-box_HMGB_rpt2"
                     /note="second high mobility group (HMG)-box found in the
                     high mobility group protein B (HMGB) family; cd21979"
                     /db_xref="CDD:438795"
     Site            order(96..102,104..106,108..109,112,124..125,127..129,132,
                     135,154,157..158,161,164..165)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438795"
     CDS             1..217
                     /gene="LOC133063867"
                     /coded_by="XM_061153762.1:<1..654"
                     /db_xref="GeneID:133063867"
ORIGIN      
        1 lntgkgdpkk prgkmssyaf fvqtcqeehk kkhpdasvnf sefskkcler wktmsakekg
       61 kfedmakadk aryeremkty ippkgetkkk fkdpsapkrp psafflfcse yrpkikgehp
      121 glsigdvakk lgemwnntaa ddkqpyekka aklkekyekd iaayrakgkp daakkgvvka
      181 ekskkkkeee edeedeedee eeedeedeee eedddde
//
LOCUS       XP_061009746             871 aa            linear   MAM 02-DEC-2023
DEFINITION  radial spoke head 10 homolog B [Dama dama].
ACCESSION   XP_061009746
VERSION     XP_061009746.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153763.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..871
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..871
                     /product="radial spoke head 10 homolog B"
                     /calculated_mol_wt=99762
     Region          <74..337
                     /region_name="COG4642"
                     /note="Uncharacterized conserved protein [Function
                     unknown]"
                     /db_xref="CDD:443680"
     CDS             1..871
                     /gene="LOC133063868"
                     /coded_by="XM_061153763.1:1..2616"
                     /db_xref="GeneID:133063868"
ORIGIN      
        1 mvkekkkadk kgdksarsps spsdysefak qdgntarqda spstappldv qlkdpgvkrq
       61 vksdslpned ttqyeepvlt klivesyege kvrglyegeg faifqggcty qgmfseglmh
      121 gqgtyiwadg lkyegdfvkn ipmnhgvftw pdgstyegev vngkrhgfgm fkcstqpvsy
      181 ighwchgkrh gkgsiyynqe gtswyegdwi hnvregwgir cyksgniyeg qwennmrhge
      241 grmrwlttne eytgqwehgv qnglgthtwf lkripysqyp lrneyvgdfv ngyrhghgkf
      301 yyasgatyeg ewvsnkkhgi grltfkngrv ydgpfskdhi aqfpnlegev msyldstses
      361 algsqwckps isaeimrkld gnesnsllgs sleldlslll kiyperdqse ekqqveyail
      421 rnitelrriy nfysslgcdr sldntflmtk lhfwrflkdc kfhhhnitla dmdrvlgann
      481 dipveeihsp fttlllrtfl nyllqlayhi hhkeyqdrsp slflcfkklm nenilpnach
      541 vkghlfceaq rtlysmtyvd kcweiytahc rpntapphel tmnmrhflwm lrsfkminke
      601 ltatkfvevi aednpsmydg idsnfelelv fleffeallg falisvpepa tkfcsdfpnd
      661 dlsvnkagst ypvtaqntqn rspsaltsqe sdiqfsstks sssklgvlld mskirkseph
      721 ikkslsdgri skvnfksagk gltfllsqng kkekskdeqk ekfntwisnm yvffvntlfq
      781 ahkheetvke kvkenrlyne amalqrkmen eelearlnsl reeeakrqdy evditvikep
      841 vdapssnftp sppkedtvvs sksmtskkkk k
//
LOCUS       XP_061009747             424 aa            linear   MAM 02-DEC-2023
DEFINITION  ankyrin repeat domain-containing protein 61 [Dama dama].
ACCESSION   XP_061009747
VERSION     XP_061009747.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153764.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..424
                     /product="ankyrin repeat domain-containing protein 61"
                     /calculated_mol_wt=46195
     Region          83..340
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          84..111
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          113..168
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          176..203
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          208..236
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(211..212,215..217,219..220,224,227,236,238,241,
                     245..246,249..251,263..264,268,271,280,282,284,288..289,
                     292..294,296..297,301,304)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          238..280
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          282..311
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          320..350
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..424
                     /gene="ANKRD61"
                     /coded_by="XM_061153764.1:546..1820"
                     /db_xref="GeneID:133063869"
ORIGIN      
        1 mgnitkrgsk graadgpqap gggtaatvhv rlceaimqqd caalrallrs hpvnqpvtvp
       61 vdstgcsmgh srlylnqetl sfipihlaak hrkaqsllcl lehgadpevr dteglttlhl
      121 mllnwpitst twtkprdriq mmltdiqsna vlclrilcah gaqvnaqvds ghrhcplhla
      181 tmygthlvlp ilaqngaqvn aqngssmtpl hmaadklnke mmetliawga nvncaisstg
      241 ntalklavct asskagrlla aglgcirlll vhgaqvnaqd hdgqaaihea cfggreaiin
      301 lllkfeanvn iltrngespi ymylqrgsni rdtallarll fhsyplrltn hqgnlpagil
      361 lpkfhllret llkltqkpls ledickrsvr niygekhkql lkrllpgkiw nsvygyhdla
      421 hllk
//
LOCUS       XP_061009749            2184 aa            linear   MAM 02-DEC-2023
DEFINITION  protein sidekick-1 isoform X1 [Dama dama].
ACCESSION   XP_061009749
VERSION     XP_061009749.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153766.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2184
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2184
                     /product="protein sidekick-1 isoform X1"
                     /calculated_mol_wt=238572
     Region          80..149
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          169..250
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          184..188
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          198..202
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          221..224
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          234..239
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          269..340
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          362..451
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          380..384
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409570"
     Region          393..397
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409570"
     Region          417..421
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409570"
     Region          431..436
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409570"
     Region          444..447
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409570"
     Region          456..546
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          473..477
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          486..490
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          512..516
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          526..531
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          539..542
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          551..640
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          567..571
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          580..586
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          606..610
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          633..636
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          644..735
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(644,711,726)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          <663..1081
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Site            order(727..728,730..731)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          747..833
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     Site            order(829..830,832..833)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          <1103..>1290
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          1255..1341
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     Site            order(1337..1338,1340..1341)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          1354..1447
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(1354,1420,1435)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(1436..1437,1439..1440)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          1455..1541
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     Region          <1501..1888
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          1879..1969
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(1879,1946,1961)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(1962..1963,1965..1966)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     CDS             1..2184
                     /gene="SDK1"
                     /coded_by="XM_061153766.1:16..6570"
                     /db_xref="GeneID:133063880"
ORIGIN      
        1 mwqglsgegr lrgagtfcqw vlrtlwqpcr drpgvcggrq lrfqgqhedl dvviypqspl
       61 gtnrksqkpt navqtddvvp yfktepglpq ihlegnrlvl tclaegswpl efkwthndse
      121 lttytseyky vipslqrlda gfyrcvvrnr mgallqrrse vqvaymgdft daderrvvse
      181 graavlslpp isscprpqvt wfreghkiip ssriaislen qlvilaaaas dagayyvqav
      241 nerngenrts ppvhlsvard agtpeamapv ivvppsnrsv vagssettle cianarpvee
      301 lsvtwkrngm rvtsglhgfg rrltisnpts sdtgvyvcea alpgsafepa rakaflsiie
      361 ppyftaepes risaeveenv divceamgvp pptlqwfkda isinklrnpr yqllaggglr
      421 vrqlrpedsg ifqclasntg gevqthtyld vtnvapaftq lpvdttvtdg ttavlrcevs
      481 gaprpaivwr rgnhvlasgs vriprfmlle sgglqiapvf iqdagnytch aansegslna
      541 satltvwnrt sivtppedrv vikgttatlh cgathdpris lryvwkkdnv viapssssrv
      601 vvekdgslli sqtwsgdigd ytcgvvsegg ndsrtarlev ielphspqnl vaslnpahgh
      661 avvlswvrpf dgnspvlyyi velsennspw kvhlsdvgpe mtgvtvrglt partyqfrvc
      721 avnqvgkgqy saetsrlmlp eeppsappkn ivasgrtnqs imvqwqpppe tehngvlrgy
      781 ilryrlaglp geyqqrniss pevsyclvte liiwtqyeiq vaayngaglg vfsravteyt
      841 lqgvptappq nvqveavnst tiqflwnppp qqfinginqg ykllawpddv peavtvvtia
      901 pdfhgvhhgy itnlkkftay ftsvlcfttp gdgppstpql iwthedkpga vghlsfteil
      961 dtslkvswqe plekngiitg yqvswevygq sasrltltln sstleykiqg lsslttytid
     1021 vaavtaagag vptsstissg vppelpgaps nlvisnispr satlqfrpgy dgktaisrwi
     1081 vqgqvgaigd eeewvtlcee enepdaqtle ipdltpythy rfrmrqvnvv gagpfsqssr
     1141 viqtlqappd vaptsitvrt asetslrlrw vplpdsryng npesvgyrvk ywrpdlpsvv
     1201 laqvisdrle reftveglee wteyelqmqa fnaigagpws aavrgrtres vpsaapenvs
     1261 aeavsstqil ltwasvpepd qnglilgyki lfrardldpe prshvvrgnh tqsallaglg
     1321 kfvlyelqvl aftrigngvp stppilertk ddapgppvrl vfpevrltsv rivwqppeep
     1381 ngiilgyqia yrlassspnt fttvevgatv rqftatelap esayvfrlsa ktrqgwgepl
     1441 eatvittekr erpapprelq vpqadvtars lclrwvpggd gaspiryftv qlrelpggqw
     1501 qtysssvshe aaayvvdrlr pftsyklrlk atndigdsdf saeteavttl qdvpgepprs
     1561 vsvtphttss vliqwqpprd eslngllqgy riyyreleye aapvtesktl ktpsalrael
     1621 taqssfktin ssstettyel thlkkyrrye vvltaynvig egpasapvev fvgeaapaqa
     1681 pqrvqvnplt asqlevawep pppesqngni qgykiyywea dsqndtekmr vlflpettak
     1741 lknltshtky lvsisafnaa gdgprsapqp gcthqaapgt psfltfseit sttlnvswge
     1801 paaangvlqg yrvvyeplap vqgvskvvtv dvkgnwprwl kvrdltkgvt yffrvqarti
     1861 aygpelqanv tagpaegspg sprdvsvtks tseltlqwte grpgktpttg yviearpsde
     1921 glwdmfakdi prgatsytvs ldqlrqgvty efrvvavnqa gygepsspsa tvsaqvetpf
     1981 yeqwwfllvm alssllvill vvfslllhgq skkyrncgtg ksisnmeesv tldnggfaal
     2041 elnsrhlnvk ntfskkngtr spprpspggl hysdedlcnk yngaaltesg alqekpgdat
     2101 esevtdsese dappqhsfvn hylsdptyyn swkrragaap hryeavagae agpapravvt
     2161 tqsavfapaa rgartpltgf ssfv
//
LOCUS       XP_061009750            2119 aa            linear   MAM 02-DEC-2023
DEFINITION  protein sidekick-1 isoform X2 [Dama dama].
ACCESSION   XP_061009750
VERSION     XP_061009750.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153767.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2119
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2119
                     /product="protein sidekick-1 isoform X2"
                     /calculated_mol_wt=231161
     Region          15..84
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          104..185
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          119..123
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          133..137
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          156..159
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          169..174
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          204..275
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          297..386
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          315..319
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409570"
     Region          328..332
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409570"
     Region          352..356
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409570"
     Region          366..371
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409570"
     Region          379..382
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409570"
     Region          391..481
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          408..412
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          421..425
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          447..451
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          461..466
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          474..477
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          486..575
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          502..506
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          515..521
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          541..545
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          568..571
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          579..670
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(579,646,661)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          <598..1016
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Site            order(662..663,665..666)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          682..768
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     Site            order(764..765,767..768)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          <1038..>1225
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          1190..1276
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     Site            order(1272..1273,1275..1276)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          1289..1382
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(1289,1355,1370)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(1371..1372,1374..1375)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          1390..1476
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     Region          <1436..1823
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          1814..1904
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(1814,1881,1896)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(1897..1898,1900..1901)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     CDS             1..2119
                     /gene="SDK1"
                     /coded_by="XM_061153767.1:7..6366"
                     /db_xref="GeneID:133063880"
ORIGIN      
        1 msspplrpss ddvvpyfkte pglpqihleg nrlvltclae gswplefkwt hndselttyt
       61 seykyvipsl qrldagfyrc vvrnrmgall qrrsevqvay mgdftdader rvvsegraav
      121 lslppisscp rpqvtwfreg hkiipssria islenqlvil aaaasdagay yvqavnerng
      181 enrtsppvhl svardagtpe amapvivvpp snrsvvagss ettleciana rpveelsvtw
      241 krngmrvtsg lhgfgrrlti snptssdtgv yvceaalpgs afeparakaf lsiieppyft
      301 aepesrisae veenvdivce amgvppptlq wfkdaisink lrnpryqlla ggglrvrqlr
      361 pedsgifqcl asntggevqt htyldvtnva paftqlpvdt tvtdgttavl rcevsgaprp
      421 aivwrrgnhv lasgsvripr fmllesgglq iapvfiqdag nytchaanse gslnasatlt
      481 vwnrtsivtp pedrvvikgt tatlhcgath dprislryvw kkdnvviaps sssrvvvekd
      541 gsllisqtws gdigdytcgv vseggndsrt arlevielph spqnlvasln pahghavvls
      601 wvrpfdgnsp vlyyivelse nnspwkvhls dvgpemtgvt vrgltparty qfrvcavnqv
      661 gkgqysaets rlmlpeepps appknivasg rtnqsimvqw qpppetehng vlrgyilryr
      721 laglpgeyqq rnisspevsy clvteliiwt qyeiqvaayn gaglgvfsra vteytlqgvp
      781 tappqnvqve avnsttiqfl wnpppqqfin ginqgyklla wpddvpeavt vvtiapdfhg
      841 vhhgyitnlk kftayftsvl cfttpgdgpp stpqliwthe dkpgavghls fteildtslk
      901 vswqeplekn giitgyqvsw evygqsasrl tltlnsstle ykiqglsslt tytidvaavt
      961 aagagvptss tissgvppel pgapsnlvis nisprsatlq frpgydgkta isrwivqgqv
     1021 gaigdeeewv tlceeenepd aqtleipdlt pythyrfrmr qvnvvgagpf sqssrviqtl
     1081 qappdvapts itvrtasets lrlrwvplpd sryngnpesv gyrvkywrpd lpsvvlaqvi
     1141 sdrlereftv egleewteye lqmqafnaig agpwsaavrg rtresvpsaa penvsaeavs
     1201 stqilltwas vpepdqngli lgykilfrar dldpeprshv vrgnhtqsal laglgkfvly
     1261 elqvlaftri gngvpstppi lertkddapg ppvrlvfpev rltsvrivwq ppeepngiil
     1321 gyqiayrlas sspntfttve vgatvrqfta telapesayv frlsaktrqg wgepleatvi
     1381 ttekrerpap prelqvpqad vtarslclrw vpggdgaspi ryftvqlrel pggqwqtyss
     1441 svsheaaayv vdrlrpftsy klrlkatndi gdsdfsaete avttlqdvpg epprsvsvtp
     1501 httssvliqw qpprdeslng llqgyriyyr eleyeaapvt esktlktpsa lraeltaqss
     1561 fktinssste ttyelthlkk yrryevvlta ynvigegpas apvevfvgea apaqapqrvq
     1621 vnpltasqle vaweppppes qngniqgyki yyweadsqnd tekmrvlflp ettaklknlt
     1681 shtkylvsis afnaagdgpr sapqpgcthq aapgtpsflt fseitsttln vswgepaaan
     1741 gvlqgyrvvy eplapvqgvs kvvtvdvkgn wprwlkvrdl tkgvtyffrv qartiaygpe
     1801 lqanvtagpa egspgsprdv svtkstselt lqwtegrpgk tpttgyviea rpsdeglwdm
     1861 fakdiprgat sytvsldqlr qgvtyefrvv avnqagygep sspsatvsaq vetpfyeqww
     1921 fllvmalssl lvillvvfsl llhgqskkyr ncgtgksisn meesvtldng gfaalelnsr
     1981 hlnvkntfsk kngtrspprp spgglhysde dlcnkyngaa ltesgalqek pgdatesevt
     2041 dsesedappq hsfvnhylsd ptyynswkrr agaaphryea vagaeagpap ravvttqsav
     2101 fapaargart pltgfssfv
//
LOCUS       XP_061009751            2034 aa            linear   MAM 02-DEC-2023
DEFINITION  protein sidekick-1 isoform X3 [Dama dama].
ACCESSION   XP_061009751
VERSION     XP_061009751.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153768.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2034
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2034
                     /product="protein sidekick-1 isoform X3"
                     /calculated_mol_wt=221361
     Region          19..100
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          34..38
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          48..52
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          71..74
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          84..89
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          119..190
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          212..301
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          230..234
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409570"
     Region          243..247
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409570"
     Region          267..271
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409570"
     Region          281..286
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409570"
     Region          294..297
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409570"
     Region          306..396
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          323..327
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          336..340
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          362..366
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          376..381
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          389..392
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          401..490
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          417..421
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          430..436
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          456..460
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          483..486
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          494..585
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(494,561,576)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          <513..931
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Site            order(577..578,580..581)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          597..683
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     Site            order(679..680,682..683)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          <953..>1140
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          1105..1191
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     Site            order(1187..1188,1190..1191)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          1204..1297
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(1204,1270,1285)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(1286..1287,1289..1290)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          1305..1391
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     Region          <1351..1738
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          1729..1819
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(1729,1796,1811)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(1812..1813,1815..1816)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     CDS             1..2034
                     /gene="SDK1"
                     /coded_by="XM_061153768.1:805..6909"
                     /db_xref="GeneID:133063880"
ORIGIN      
        1 mgallqrrse vqvaymgdft daderrvvse graavlslpp isscprpqvt wfreghkiip
       61 ssriaislen qlvilaaaas dagayyvqav nerngenrts ppvhlsvard agtpeamapv
      121 ivvppsnrsv vagssettle cianarpvee lsvtwkrngm rvtsglhgfg rrltisnpts
      181 sdtgvyvcea alpgsafepa rakaflsiie ppyftaepes risaeveenv divceamgvp
      241 pptlqwfkda isinklrnpr yqllaggglr vrqlrpedsg ifqclasntg gevqthtyld
      301 vtnvapaftq lpvdttvtdg ttavlrcevs gaprpaivwr rgnhvlasgs vriprfmlle
      361 sgglqiapvf iqdagnytch aansegslna satltvwnrt sivtppedrv vikgttatlh
      421 cgathdpris lryvwkkdnv viapssssrv vvekdgslli sqtwsgdigd ytcgvvsegg
      481 ndsrtarlev ielphspqnl vaslnpahgh avvlswvrpf dgnspvlyyi velsennspw
      541 kvhlsdvgpe mtgvtvrglt partyqfrvc avnqvgkgqy saetsrlmlp eeppsappkn
      601 ivasgrtnqs imvqwqpppe tehngvlrgy ilryrlaglp geyqqrniss pevsyclvte
      661 liiwtqyeiq vaayngaglg vfsravteyt lqgvptappq nvqveavnst tiqflwnppp
      721 qqfinginqg ykllawpddv peavtvvtia pdfhgvhhgy itnlkkftay ftsvlcfttp
      781 gdgppstpql iwthedkpga vghlsfteil dtslkvswqe plekngiitg yqvswevygq
      841 sasrltltln sstleykiqg lsslttytid vaavtaagag vptsstissg vppelpgaps
      901 nlvisnispr satlqfrpgy dgktaisrwi vqgqvgaigd eeewvtlcee enepdaqtle
      961 ipdltpythy rfrmrqvnvv gagpfsqssr viqtlqappd vaptsitvrt asetslrlrw
     1021 vplpdsryng npesvgyrvk ywrpdlpsvv laqvisdrle reftveglee wteyelqmqa
     1081 fnaigagpws aavrgrtres vpsaapenvs aeavsstqil ltwasvpepd qnglilgyki
     1141 lfrardldpe prshvvrgnh tqsallaglg kfvlyelqvl aftrigngvp stppilertk
     1201 ddapgppvrl vfpevrltsv rivwqppeep ngiilgyqia yrlassspnt fttvevgatv
     1261 rqftatelap esayvfrlsa ktrqgwgepl eatvittekr erpapprelq vpqadvtars
     1321 lclrwvpggd gaspiryftv qlrelpggqw qtysssvshe aaayvvdrlr pftsyklrlk
     1381 atndigdsdf saeteavttl qdvpgepprs vsvtphttss vliqwqpprd eslngllqgy
     1441 riyyreleye aapvtesktl ktpsalrael taqssfktin ssstettyel thlkkyrrye
     1501 vvltaynvig egpasapvev fvgeaapaqa pqrvqvnplt asqlevawep pppesqngni
     1561 qgykiyywea dsqndtekmr vlflpettak lknltshtky lvsisafnaa gdgprsapqp
     1621 gcthqaapgt psfltfseit sttlnvswge paaangvlqg yrvvyeplap vqgvskvvtv
     1681 dvkgnwprwl kvrdltkgvt yffrvqarti aygpelqanv tagpaegspg sprdvsvtks
     1741 tseltlqwte grpgktpttg yviearpsde glwdmfakdi prgatsytvs ldqlrqgvty
     1801 efrvvavnqa gygepsspsa tvsaqvetpf yeqwwfllvm alssllvill vvfslllhgq
     1861 skkyrncgtg ksisnmeesv tldnggfaal elnsrhlnvk ntfskkngtr spprpspggl
     1921 hysdedlcnk yngaaltesg alqekpgdat esevtdsese dappqhsfvn hylsdptyyn
     1981 swkrragaap hryeavagae agpapravvt tqsavfapaa rgartpltgf ssfv
//
LOCUS       XP_061009752            1154 aa            linear   MAM 02-DEC-2023
DEFINITION  caspase recruitment domain-containing protein 11 isoform X1 [Dama
            dama].
ACCESSION   XP_061009752
VERSION     XP_061009752.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153769.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1154
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1154
                     /product="caspase recruitment domain-containing protein 11
                     isoform X1"
                     /calculated_mol_wt=133193
     Region          22..107
                     /region_name="CARD_CARD11_CARMA1"
                     /note="Caspase activation and recruitment domain of
                     CARD11-like proteins; cd08808"
                     /db_xref="CDD:260070"
     Site            order(35,38,41,69,72)
                     /site_type="other"
                     /note="putative BCL10 interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:260070"
     Region          <205..>449
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          668..742
                     /region_name="PDZ_CARD11_CARD14-like"
                     /note="PDZ domain of caspase recruitment domain-containing
                     protein 11 (CARD11), CARD14, and related domains; cd06736"
                     /db_xref="CDD:467218"
     Site            order(682..688,693,696,724,728,731..732)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467218"
     Region          777..839
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
     Site            order(782,784,787,792,812..813,833,835..836)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212793"
     CDS             1..1154
                     /gene="CARD11"
                     /coded_by="XM_061153769.1:286..3750"
                     /db_xref="GeneID:133063881"
ORIGIN      
        1 mpggapemdd ymetlkdeed alwenvecnr hmlsryinpa kltpylrqck videqdedev
       61 lnapmlpski nragrlldil htkgqrgyvv fleslefyyp elyklvtgke ptrrfstivv
      121 eegheglthf lmneviklqq qmkakdlqrc ellaksrqle dekkqltltr velltfqery
      181 ykmkeerdsy ndelvkvkdd nynlamryaq lseeknmavm rsrdlqleid qlkhrlnkme
      241 eecklernqs lklkndienr pkkeqvlele renemlktki qelqsiiqag krslpdsdka
      301 ildilehdrk ealedrqelv nkiynlqeev rqaeelrdky leekedlelk cstlgkdcem
      361 ykhrmntvml qleevererd qafhsrdeaq tqysqcliek dkyrkqirel eekndemrie
      421 mvrreacivn lesklrrlsk dsgtleqslp rnlpvtiisq nfgdtsprtn gqeaddssts
      481 edspednryf lphhppkrrm nlkgiqlqra kspislkrts dfqgrgqeed lldaspsssr
      541 slpvtnsfsk mqphrsrssi msitaeppgn dsivrryked aphrstveed ndsggfdald
      601 ldddshercs fgppsihsss sshqseglda ydleqvnlmf rkfslerpfr psvtsvghvr
      661 gpglsvqhtt lsgdglisql sllggnasgs fvhfvkpgsl aekaglregh qllllegcir
      721 gerqsvplda ctkeeahwti qrcsgpvtlh ykvnqegyrk llkdmeegli tsgdsfyirl
      781 nlnissqlda csmslkcddv vhvrdtmyqd khewlcarvd pftdhdldmg tipsysraqq
      841 lllvklqrlm hrgsreeadt ahhtlralrn tlqpeeplpt tdprvsprls rasflfgqll
      901 qfvsrsenky krmnshervr ivsgsprgsl arssldatkl ltekqeeldp eselgknlsl
      961 ipyslvrafy cerrrpvlft ptmlakalvq kllnsggame ftmckpdvvt kdeflrkqkm
     1021 etiihsrekn pntfecvvpa hieavaaknk hclleagisc trdliksriy pivlfvrvse
     1081 knikkfrkml prpetedefl rlcrlkekel ealpclyatv eadmwgsvee llrvikdkia
     1141 eeqrktvwvd edql
//
LOCUS       XP_061009753            1154 aa            linear   MAM 02-DEC-2023
DEFINITION  caspase recruitment domain-containing protein 11 isoform X1 [Dama
            dama].
ACCESSION   XP_061009753
VERSION     XP_061009753.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153770.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1154
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1154
                     /product="caspase recruitment domain-containing protein 11
                     isoform X1"
                     /calculated_mol_wt=133193
     Region          22..107
                     /region_name="CARD_CARD11_CARMA1"
                     /note="Caspase activation and recruitment domain of
                     CARD11-like proteins; cd08808"
                     /db_xref="CDD:260070"
     Site            order(35,38,41,69,72)
                     /site_type="other"
                     /note="putative BCL10 interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:260070"
     Region          <205..>449
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          668..742
                     /region_name="PDZ_CARD11_CARD14-like"
                     /note="PDZ domain of caspase recruitment domain-containing
                     protein 11 (CARD11), CARD14, and related domains; cd06736"
                     /db_xref="CDD:467218"
     Site            order(682..688,693,696,724,728,731..732)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467218"
     Region          777..839
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
     Site            order(782,784,787,792,812..813,833,835..836)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212793"
     CDS             1..1154
                     /gene="CARD11"
                     /coded_by="XM_061153770.1:329..3793"
                     /db_xref="GeneID:133063881"
ORIGIN      
        1 mpggapemdd ymetlkdeed alwenvecnr hmlsryinpa kltpylrqck videqdedev
       61 lnapmlpski nragrlldil htkgqrgyvv fleslefyyp elyklvtgke ptrrfstivv
      121 eegheglthf lmneviklqq qmkakdlqrc ellaksrqle dekkqltltr velltfqery
      181 ykmkeerdsy ndelvkvkdd nynlamryaq lseeknmavm rsrdlqleid qlkhrlnkme
      241 eecklernqs lklkndienr pkkeqvlele renemlktki qelqsiiqag krslpdsdka
      301 ildilehdrk ealedrqelv nkiynlqeev rqaeelrdky leekedlelk cstlgkdcem
      361 ykhrmntvml qleevererd qafhsrdeaq tqysqcliek dkyrkqirel eekndemrie
      421 mvrreacivn lesklrrlsk dsgtleqslp rnlpvtiisq nfgdtsprtn gqeaddssts
      481 edspednryf lphhppkrrm nlkgiqlqra kspislkrts dfqgrgqeed lldaspsssr
      541 slpvtnsfsk mqphrsrssi msitaeppgn dsivrryked aphrstveed ndsggfdald
      601 ldddshercs fgppsihsss sshqseglda ydleqvnlmf rkfslerpfr psvtsvghvr
      661 gpglsvqhtt lsgdglisql sllggnasgs fvhfvkpgsl aekaglregh qllllegcir
      721 gerqsvplda ctkeeahwti qrcsgpvtlh ykvnqegyrk llkdmeegli tsgdsfyirl
      781 nlnissqlda csmslkcddv vhvrdtmyqd khewlcarvd pftdhdldmg tipsysraqq
      841 lllvklqrlm hrgsreeadt ahhtlralrn tlqpeeplpt tdprvsprls rasflfgqll
      901 qfvsrsenky krmnshervr ivsgsprgsl arssldatkl ltekqeeldp eselgknlsl
      961 ipyslvrafy cerrrpvlft ptmlakalvq kllnsggame ftmckpdvvt kdeflrkqkm
     1021 etiihsrekn pntfecvvpa hieavaaknk hclleagisc trdliksriy pivlfvrvse
     1081 knikkfrkml prpetedefl rlcrlkekel ealpclyatv eadmwgsvee llrvikdkia
     1141 eeqrktvwvd edql
//
LOCUS       XP_061009754            1154 aa            linear   MAM 02-DEC-2023
DEFINITION  caspase recruitment domain-containing protein 11 isoform X1 [Dama
            dama].
ACCESSION   XP_061009754
VERSION     XP_061009754.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153771.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1154
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1154
                     /product="caspase recruitment domain-containing protein 11
                     isoform X1"
                     /calculated_mol_wt=133193
     Region          22..107
                     /region_name="CARD_CARD11_CARMA1"
                     /note="Caspase activation and recruitment domain of
                     CARD11-like proteins; cd08808"
                     /db_xref="CDD:260070"
     Site            order(35,38,41,69,72)
                     /site_type="other"
                     /note="putative BCL10 interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:260070"
     Region          <205..>449
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          668..742
                     /region_name="PDZ_CARD11_CARD14-like"
                     /note="PDZ domain of caspase recruitment domain-containing
                     protein 11 (CARD11), CARD14, and related domains; cd06736"
                     /db_xref="CDD:467218"
     Site            order(682..688,693,696,724,728,731..732)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467218"
     Region          777..839
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
     Site            order(782,784,787,792,812..813,833,835..836)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212793"
     CDS             1..1154
                     /gene="CARD11"
                     /coded_by="XM_061153771.1:151..3615"
                     /db_xref="GeneID:133063881"
ORIGIN      
        1 mpggapemdd ymetlkdeed alwenvecnr hmlsryinpa kltpylrqck videqdedev
       61 lnapmlpski nragrlldil htkgqrgyvv fleslefyyp elyklvtgke ptrrfstivv
      121 eegheglthf lmneviklqq qmkakdlqrc ellaksrqle dekkqltltr velltfqery
      181 ykmkeerdsy ndelvkvkdd nynlamryaq lseeknmavm rsrdlqleid qlkhrlnkme
      241 eecklernqs lklkndienr pkkeqvlele renemlktki qelqsiiqag krslpdsdka
      301 ildilehdrk ealedrqelv nkiynlqeev rqaeelrdky leekedlelk cstlgkdcem
      361 ykhrmntvml qleevererd qafhsrdeaq tqysqcliek dkyrkqirel eekndemrie
      421 mvrreacivn lesklrrlsk dsgtleqslp rnlpvtiisq nfgdtsprtn gqeaddssts
      481 edspednryf lphhppkrrm nlkgiqlqra kspislkrts dfqgrgqeed lldaspsssr
      541 slpvtnsfsk mqphrsrssi msitaeppgn dsivrryked aphrstveed ndsggfdald
      601 ldddshercs fgppsihsss sshqseglda ydleqvnlmf rkfslerpfr psvtsvghvr
      661 gpglsvqhtt lsgdglisql sllggnasgs fvhfvkpgsl aekaglregh qllllegcir
      721 gerqsvplda ctkeeahwti qrcsgpvtlh ykvnqegyrk llkdmeegli tsgdsfyirl
      781 nlnissqlda csmslkcddv vhvrdtmyqd khewlcarvd pftdhdldmg tipsysraqq
      841 lllvklqrlm hrgsreeadt ahhtlralrn tlqpeeplpt tdprvsprls rasflfgqll
      901 qfvsrsenky krmnshervr ivsgsprgsl arssldatkl ltekqeeldp eselgknlsl
      961 ipyslvrafy cerrrpvlft ptmlakalvq kllnsggame ftmckpdvvt kdeflrkqkm
     1021 etiihsrekn pntfecvvpa hieavaaknk hclleagisc trdliksriy pivlfvrvse
     1081 knikkfrkml prpetedefl rlcrlkekel ealpclyatv eadmwgsvee llrvikdkia
     1141 eeqrktvwvd edql
//
LOCUS       XP_061009755            1153 aa            linear   MAM 02-DEC-2023
DEFINITION  caspase recruitment domain-containing protein 11 isoform X2 [Dama
            dama].
ACCESSION   XP_061009755
VERSION     XP_061009755.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153772.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1153
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1153
                     /product="caspase recruitment domain-containing protein 11
                     isoform X2"
                     /calculated_mol_wt=133065
     Region          22..107
                     /region_name="CARD_CARD11_CARMA1"
                     /note="Caspase activation and recruitment domain of
                     CARD11-like proteins; cd08808"
                     /db_xref="CDD:260070"
     Site            order(35,38,41,69,72)
                     /site_type="other"
                     /note="putative BCL10 interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:260070"
     Region          <205..>449
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          667..741
                     /region_name="PDZ_CARD11_CARD14-like"
                     /note="PDZ domain of caspase recruitment domain-containing
                     protein 11 (CARD11), CARD14, and related domains; cd06736"
                     /db_xref="CDD:467218"
     Site            order(681..687,692,695,723,727,730..731)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467218"
     Region          776..838
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
     Site            order(781,783,786,791,811..812,832,834..835)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212793"
     CDS             1..1153
                     /gene="CARD11"
                     /coded_by="XM_061153772.1:286..3747"
                     /db_xref="GeneID:133063881"
ORIGIN      
        1 mpggapemdd ymetlkdeed alwenvecnr hmlsryinpa kltpylrqck videqdedev
       61 lnapmlpski nragrlldil htkgqrgyvv fleslefyyp elyklvtgke ptrrfstivv
      121 eegheglthf lmneviklqq qmkakdlqrc ellaksrqle dekkqltltr velltfqery
      181 ykmkeerdsy ndelvkvkdd nynlamryaq lseeknmavm rsrdlqleid qlkhrlnkme
      241 eecklernqs lklkndienr pkkeqvlele renemlktki qelqsiiqag krslpdsdka
      301 ildilehdrk ealedrqelv nkiynlqeev rqaeelrdky leekedlelk cstlgkdcem
      361 ykhrmntvml qleevererd qafhsrdeaq tqysqcliek dkyrkqirel eekndemrie
      421 mvrreacivn lesklrrlsk dsgtleqslp rnlpvtiisq nfgdtsprtn gqeaddssts
      481 edspednryf lphhppkrrm nlkgiqlqra kspislkrts dfqgrgqeed lldaspsssr
      541 slpvtnsfsk mphrsrssim sitaeppgnd sivrrykeda phrstveedn dsggfdaldl
      601 dddshercsf gppsihssss shqseglday dleqvnlmfr kfslerpfrp svtsvghvrg
      661 pglsvqhttl sgdglisqls llggnasgsf vhfvkpgsla ekaglreghq llllegcirg
      721 erqsvpldac tkeeahwtiq rcsgpvtlhy kvnqegyrkl lkdmeeglit sgdsfyirln
      781 lnissqldac smslkcddvv hvrdtmyqdk hewlcarvdp ftdhdldmgt ipsysraqql
      841 llvklqrlmh rgsreeadta hhtlralrnt lqpeeplptt dprvsprlsr asflfgqllq
      901 fvsrsenkyk rmnshervri vsgsprgsla rssldatkll tekqeeldpe selgknlsli
      961 pyslvrafyc errrpvlftp tmlakalvqk llnsggamef tmckpdvvtk deflrkqkme
     1021 tiihsreknp ntfecvvpah ieavaaknkh clleagisct rdliksriyp ivlfvrvsek
     1081 nikkfrkmlp rpetedeflr lcrlkekele alpclyatve admwgsveel lrvikdkiae
     1141 eqrktvwvde dql
//
LOCUS       XP_061009756             382 aa            linear   MAM 02-DEC-2023
DEFINITION  guanine nucleotide-binding protein subunit alpha-12 isoform X1
            [Dama dama].
ACCESSION   XP_061009756
VERSION     XP_061009756.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153773.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..382
                     /product="guanine nucleotide-binding protein subunit
                     alpha-12 isoform X1"
                     /calculated_mol_wt=43974
     Region          43..380
                     /region_name="G_alpha"
                     /note="G protein alpha subunit; smart00275"
                     /db_xref="CDD:214595"
     CDS             1..382
                     /gene="GNA12"
                     /coded_by="XM_061153773.1:1..1149"
                     /db_xref="GeneID:133063883"
ORIGIN      
        1 msgvvrtlsr cllpaeagga rerragggga rdaerearrr srdidaglar erravrrlvk
       61 illlgagesg kstflkqmri ihgrefdqka llefrdtifd nilkgarvlv dardklgipw
      121 qysenekhgm flmafenkag lpvdpatfql yvpalsalwg dsgireafsr rsefqlgesv
      181 kyfldnldri gqlnyfpskq dillarkatk givehdfvik kipfkmvdvg gqrsqrqkwf
      241 qcfdgitsil fmvssseydq vlmedrrtnr llesmnifet ivnnklffnv siilflnkmd
      301 llvekvktvs ikkhfpdfkg dphrledvqr flvqcfdrkr rnrskplfhh fttaidteni
      361 rfvfhavkdt ilqenlkdim lq
//
LOCUS       XP_061009757             316 aa            linear   MAM 02-DEC-2023
DEFINITION  guanine nucleotide-binding protein subunit alpha-12 isoform X2
            [Dama dama].
ACCESSION   XP_061009757
VERSION     XP_061009757.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153774.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..316
                     /product="guanine nucleotide-binding protein subunit
                     alpha-12 isoform X2"
                     /calculated_mol_wt=36893
     Region          1..310
                     /region_name="G-alpha"
                     /note="Alpha subunit of G proteins (guanine nucleotide
                     binding); cd00066"
                     /db_xref="CDD:206639"
     Site            order(19,23,38,41,44..45,63,66,111,140,165,173,177)
                     /site_type="active"
                     /note="GoLoco binding site [active]"
                     /db_xref="CDD:206639"
     Site            138..146
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206639"
     Site            143
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206639"
     Site            order(144,146,148,159,161,165..167,169,172..173,175..178)
                     /site_type="other"
                     /note="beta - gamma complex interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206639"
     Site            order(146,171,174..175,178)
                     /site_type="other"
                     /note="adenylyl cyclase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206639"
     Site            162..165
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206639"
     Site            163..179
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206639"
     Site            231..234
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206639"
     Site            order(279..290,292..295)
                     /site_type="active"
                     /note="putative receptor binding site [active]"
                     /db_xref="CDD:206639"
     Site            287..289
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206639"
     CDS             1..316
                     /gene="GNA12"
                     /coded_by="XM_061153774.1:115..1065"
                     /db_xref="GeneID:133063883"
ORIGIN      
        1 mriihgrefd qkallefrdt ifdnilkvra prphtcaqga rvlvdardkl gipwqysene
       61 khgmflmafe nkaglpvdpa tfqlyvpals alwgdsgire afsrrsefql gesvkyfldn
      121 ldrigqlnyf pskqdillar katkgivehd fvikkipfkm vdvggqrsqr qkwfqcfdgi
      181 tsilfmvsss eydqvlmedr rtnrllesmn ifetivnnkl ffnvsiilfl nkmdllvekv
      241 ktvsikkhfp dfkgdphrle dvqrflvqcf drkrrnrskp lfhhfttaid tenirfvfha
      301 vkdtilqenl kdimlq
//
LOCUS       XP_061009758             507 aa            linear   MAM 02-DEC-2023
DEFINITION  archaemetzincin-1 [Dama dama].
ACCESSION   XP_061009758
VERSION     XP_061009758.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153775.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..507
                     /product="archaemetzincin-1"
                     /calculated_mol_wt=54793
     Region          105..315
                     /region_name="Peptidase_M54"
                     /note="Peptidase family M54, also called archaemetzincins
                     or archaelysins; cd11375"
                     /db_xref="CDD:213029"
     Site            order(201,203,271..272,275,281..282,287,289,306,309)
                     /site_type="active"
                     /db_xref="CDD:213029"
     CDS             1..507
                     /gene="AMZ1"
                     /coded_by="XM_061153775.1:354..1877"
                     /db_xref="GeneID:133063884"
ORIGIN      
        1 mgrpgearpv mlqcrpaeef sfgpralkda llstdpalrq lytaafspae rlflaeaynp
       61 qrtlfgtlli rtafdwllsr peapedfqtf haalpprkqs larkhiylqp idlsegpags
      121 alldqlrsct eafflglqvr clpsvaaasi hcssrpsqdp drlqlhtdgi lsflksskpg
      181 dalcvlgltl sdlypreawt ftfgtflpgh evgvcsfarf sgeflprgps tpdlaeveva
      241 aggsevplqd ggqavcfstl gmvqcckvtc helchllglg ncrwlrclmq galrvdealr
      301 rpldlcpicl rklqhllgfr lvdrykrlya wtqaaagtqp gpaaagepsv sedtlpcsad
      361 sglccesdse pgsslsepls pdawsqafpa glelepedgl gslaategpg ealaehgrwl
      421 aaciqalerd vsegeleqvd gavdalapwd lftgqlpapr qdlpcgrdgv glrrvlgdtf
      481 sslrrklsar rpsraesspr rqkaedd
//
LOCUS       XP_061009760             507 aa            linear   MAM 02-DEC-2023
DEFINITION  archaemetzincin-1 [Dama dama].
ACCESSION   XP_061009760
VERSION     XP_061009760.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153777.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..507
                     /product="archaemetzincin-1"
                     /calculated_mol_wt=54793
     Region          105..315
                     /region_name="Peptidase_M54"
                     /note="Peptidase family M54, also called archaemetzincins
                     or archaelysins; cd11375"
                     /db_xref="CDD:213029"
     Site            order(201,203,271..272,275,281..282,287,289,306,309)
                     /site_type="active"
                     /db_xref="CDD:213029"
     CDS             1..507
                     /gene="AMZ1"
                     /coded_by="XM_061153777.1:337..1860"
                     /db_xref="GeneID:133063884"
ORIGIN      
        1 mgrpgearpv mlqcrpaeef sfgpralkda llstdpalrq lytaafspae rlflaeaynp
       61 qrtlfgtlli rtafdwllsr peapedfqtf haalpprkqs larkhiylqp idlsegpags
      121 alldqlrsct eafflglqvr clpsvaaasi hcssrpsqdp drlqlhtdgi lsflksskpg
      181 dalcvlgltl sdlypreawt ftfgtflpgh evgvcsfarf sgeflprgps tpdlaeveva
      241 aggsevplqd ggqavcfstl gmvqcckvtc helchllglg ncrwlrclmq galrvdealr
      301 rpldlcpicl rklqhllgfr lvdrykrlya wtqaaagtqp gpaaagepsv sedtlpcsad
      361 sglccesdse pgsslsepls pdawsqafpa glelepedgl gslaategpg ealaehgrwl
      421 aaciqalerd vsegeleqvd gavdalapwd lftgqlpapr qdlpcgrdgv glrrvlgdtf
      481 sslrrklsar rpsraesspr rqkaedd
//
LOCUS       XP_061009761             507 aa            linear   MAM 02-DEC-2023
DEFINITION  archaemetzincin-1 [Dama dama].
ACCESSION   XP_061009761
VERSION     XP_061009761.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153778.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..507
                     /product="archaemetzincin-1"
                     /calculated_mol_wt=54793
     Region          105..315
                     /region_name="Peptidase_M54"
                     /note="Peptidase family M54, also called archaemetzincins
                     or archaelysins; cd11375"
                     /db_xref="CDD:213029"
     Site            order(201,203,271..272,275,281..282,287,289,306,309)
                     /site_type="active"
                     /db_xref="CDD:213029"
     CDS             1..507
                     /gene="AMZ1"
                     /coded_by="XM_061153778.1:247..1770"
                     /db_xref="GeneID:133063884"
ORIGIN      
        1 mgrpgearpv mlqcrpaeef sfgpralkda llstdpalrq lytaafspae rlflaeaynp
       61 qrtlfgtlli rtafdwllsr peapedfqtf haalpprkqs larkhiylqp idlsegpags
      121 alldqlrsct eafflglqvr clpsvaaasi hcssrpsqdp drlqlhtdgi lsflksskpg
      181 dalcvlgltl sdlypreawt ftfgtflpgh evgvcsfarf sgeflprgps tpdlaeveva
      241 aggsevplqd ggqavcfstl gmvqcckvtc helchllglg ncrwlrclmq galrvdealr
      301 rpldlcpicl rklqhllgfr lvdrykrlya wtqaaagtqp gpaaagepsv sedtlpcsad
      361 sglccesdse pgsslsepls pdawsqafpa glelepedgl gslaategpg ealaehgrwl
      421 aaciqalerd vsegeleqvd gavdalapwd lftgqlpapr qdlpcgrdgv glrrvlgdtf
      481 sslrrklsar rpsraesspr rqkaedd
//
LOCUS       XP_061009762             507 aa            linear   MAM 02-DEC-2023
DEFINITION  archaemetzincin-1 [Dama dama].
ACCESSION   XP_061009762
VERSION     XP_061009762.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153779.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..507
                     /product="archaemetzincin-1"
                     /calculated_mol_wt=54793
     Region          105..315
                     /region_name="Peptidase_M54"
                     /note="Peptidase family M54, also called archaemetzincins
                     or archaelysins; cd11375"
                     /db_xref="CDD:213029"
     Site            order(201,203,271..272,275,281..282,287,289,306,309)
                     /site_type="active"
                     /db_xref="CDD:213029"
     CDS             1..507
                     /gene="AMZ1"
                     /coded_by="XM_061153779.1:332..1855"
                     /db_xref="GeneID:133063884"
ORIGIN      
        1 mgrpgearpv mlqcrpaeef sfgpralkda llstdpalrq lytaafspae rlflaeaynp
       61 qrtlfgtlli rtafdwllsr peapedfqtf haalpprkqs larkhiylqp idlsegpags
      121 alldqlrsct eafflglqvr clpsvaaasi hcssrpsqdp drlqlhtdgi lsflksskpg
      181 dalcvlgltl sdlypreawt ftfgtflpgh evgvcsfarf sgeflprgps tpdlaeveva
      241 aggsevplqd ggqavcfstl gmvqcckvtc helchllglg ncrwlrclmq galrvdealr
      301 rpldlcpicl rklqhllgfr lvdrykrlya wtqaaagtqp gpaaagepsv sedtlpcsad
      361 sglccesdse pgsslsepls pdawsqafpa glelepedgl gslaategpg ealaehgrwl
      421 aaciqalerd vsegeleqvd gavdalapwd lftgqlpapr qdlpcgrdgv glrrvlgdtf
      481 sslrrklsar rpsraesspr rqkaedd
//
LOCUS       XP_061009763             819 aa            linear   MAM 02-DEC-2023
DEFINITION  BRCA1-associated ATM activator 1 isoform X1 [Dama dama].
ACCESSION   XP_061009763
VERSION     XP_061009763.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153780.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..819
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..819
                     /product="BRCA1-associated ATM activator 1 isoform X1"
                     /calculated_mol_wt=87336
     Region          <6..>86
                     /region_name="GlnE1"
                     /note="Glutamine synthetase adenylyltransferase
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG1391"
                     /db_xref="CDD:441001"
     Site            order(396..397,400,403..404,432..433,436,439..440,443,
                     474..475,478,481..482,494,523..524,527,530..531,568..569,
                     572,575..576)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          416..443
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          453..495
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          505..531
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          542..577
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     CDS             1..819
                     /gene="BRAT1"
                     /coded_by="XM_061153780.1:434..2893"
                     /db_xref="GeneID:133063885"
ORIGIN      
        1 mdpecarllp alcavladpr qpvaddtcle klldwfkavt eagssllllq enpclvellf
       61 hvlkpqdlss rilsfalrla gtfaaqencf qylqqgellp glfgeqgplg aaawaaptvr
      121 sgwiqglrsl aqhpsallfl adsgavdtif slqgdpslfv asaagqllvh vldlamrspa
      181 egcgpaeghg rpqardwpac arrivchled clcseatprv tqalhvltta fghchglwtq
      241 glwvqlsplv arllekdpvp aphalvelll svarssvpss dpglwetaaq tlsclspmqa
      301 gplaagilkl qdcpqtlrth afgvllrpla cvleaaaqap gipgllegaa gdpmavdmlp
      361 psksacvgll cstlahlell qplpqrpspw pqapllaaav tilrfcngsa apssevggrl
      421 camlvgcvrv qraaldflgv lsqglgprel vtqvfavlle ylvspdsspt vlkkafqatl
      481 rwllssavpp gccdlepraq lvlgellavl qkrlcspcwe vrdsgleflt qmtrrwggqa
      541 gfrqallase vpkltsqllq dpesyvrasa vaaagqlssr gllaapsspe ypagpqktpl
      601 eelllvlttd segfprraam rvftewlrdg hvataedrer fvarvlqaas gdldwevrvq
      661 glelalvflq qllgargpge appgalaqal ralcrvqlfe fafrslfdcd rpvaqkscdl
      721 llflrakaap sgslqeagds pdvapveaal rrwrageqgq plgelapeav lavlrsmdle
      781 alrdtlaess dhverspqsl lqdmlatvgv lgdneadcy
//
LOCUS       XP_061009764             819 aa            linear   MAM 02-DEC-2023
DEFINITION  BRCA1-associated ATM activator 1 isoform X1 [Dama dama].
ACCESSION   XP_061009764
VERSION     XP_061009764.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153781.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..819
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..819
                     /product="BRCA1-associated ATM activator 1 isoform X1"
                     /calculated_mol_wt=87336
     Region          <6..>86
                     /region_name="GlnE1"
                     /note="Glutamine synthetase adenylyltransferase
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG1391"
                     /db_xref="CDD:441001"
     Site            order(396..397,400,403..404,432..433,436,439..440,443,
                     474..475,478,481..482,494,523..524,527,530..531,568..569,
                     572,575..576)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          416..443
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          453..495
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          505..531
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          542..577
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     CDS             1..819
                     /gene="BRAT1"
                     /coded_by="XM_061153781.1:429..2888"
                     /db_xref="GeneID:133063885"
ORIGIN      
        1 mdpecarllp alcavladpr qpvaddtcle klldwfkavt eagssllllq enpclvellf
       61 hvlkpqdlss rilsfalrla gtfaaqencf qylqqgellp glfgeqgplg aaawaaptvr
      121 sgwiqglrsl aqhpsallfl adsgavdtif slqgdpslfv asaagqllvh vldlamrspa
      181 egcgpaeghg rpqardwpac arrivchled clcseatprv tqalhvltta fghchglwtq
      241 glwvqlsplv arllekdpvp aphalvelll svarssvpss dpglwetaaq tlsclspmqa
      301 gplaagilkl qdcpqtlrth afgvllrpla cvleaaaqap gipgllegaa gdpmavdmlp
      361 psksacvgll cstlahlell qplpqrpspw pqapllaaav tilrfcngsa apssevggrl
      421 camlvgcvrv qraaldflgv lsqglgprel vtqvfavlle ylvspdsspt vlkkafqatl
      481 rwllssavpp gccdlepraq lvlgellavl qkrlcspcwe vrdsgleflt qmtrrwggqa
      541 gfrqallase vpkltsqllq dpesyvrasa vaaagqlssr gllaapsspe ypagpqktpl
      601 eelllvlttd segfprraam rvftewlrdg hvataedrer fvarvlqaas gdldwevrvq
      661 glelalvflq qllgargpge appgalaqal ralcrvqlfe fafrslfdcd rpvaqkscdl
      721 llflrakaap sgslqeagds pdvapveaal rrwrageqgq plgelapeav lavlrsmdle
      781 alrdtlaess dhverspqsl lqdmlatvgv lgdneadcy
//
LOCUS       XP_061009765             819 aa            linear   MAM 02-DEC-2023
DEFINITION  BRCA1-associated ATM activator 1 isoform X1 [Dama dama].
ACCESSION   XP_061009765
VERSION     XP_061009765.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153782.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..819
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..819
                     /product="BRCA1-associated ATM activator 1 isoform X1"
                     /calculated_mol_wt=87336
     Region          <6..>86
                     /region_name="GlnE1"
                     /note="Glutamine synthetase adenylyltransferase
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG1391"
                     /db_xref="CDD:441001"
     Site            order(396..397,400,403..404,432..433,436,439..440,443,
                     474..475,478,481..482,494,523..524,527,530..531,568..569,
                     572,575..576)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          416..443
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          453..495
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          505..531
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          542..577
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     CDS             1..819
                     /gene="BRAT1"
                     /coded_by="XM_061153782.1:425..2884"
                     /db_xref="GeneID:133063885"
ORIGIN      
        1 mdpecarllp alcavladpr qpvaddtcle klldwfkavt eagssllllq enpclvellf
       61 hvlkpqdlss rilsfalrla gtfaaqencf qylqqgellp glfgeqgplg aaawaaptvr
      121 sgwiqglrsl aqhpsallfl adsgavdtif slqgdpslfv asaagqllvh vldlamrspa
      181 egcgpaeghg rpqardwpac arrivchled clcseatprv tqalhvltta fghchglwtq
      241 glwvqlsplv arllekdpvp aphalvelll svarssvpss dpglwetaaq tlsclspmqa
      301 gplaagilkl qdcpqtlrth afgvllrpla cvleaaaqap gipgllegaa gdpmavdmlp
      361 psksacvgll cstlahlell qplpqrpspw pqapllaaav tilrfcngsa apssevggrl
      421 camlvgcvrv qraaldflgv lsqglgprel vtqvfavlle ylvspdsspt vlkkafqatl
      481 rwllssavpp gccdlepraq lvlgellavl qkrlcspcwe vrdsgleflt qmtrrwggqa
      541 gfrqallase vpkltsqllq dpesyvrasa vaaagqlssr gllaapsspe ypagpqktpl
      601 eelllvlttd segfprraam rvftewlrdg hvataedrer fvarvlqaas gdldwevrvq
      661 glelalvflq qllgargpge appgalaqal ralcrvqlfe fafrslfdcd rpvaqkscdl
      721 llflrakaap sgslqeagds pdvapveaal rrwrageqgq plgelapeav lavlrsmdle
      781 alrdtlaess dhverspqsl lqdmlatvgv lgdneadcy
//
LOCUS       XP_061009766             818 aa            linear   MAM 02-DEC-2023
DEFINITION  BRCA1-associated ATM activator 1 isoform X2 [Dama dama].
ACCESSION   XP_061009766
VERSION     XP_061009766.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153783.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..818
                     /product="BRCA1-associated ATM activator 1 isoform X2"
                     /calculated_mol_wt=87208
     Region          <6..>86
                     /region_name="GlnE1"
                     /note="Glutamine synthetase adenylyltransferase
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG1391"
                     /db_xref="CDD:441001"
     Site            order(396..397,400,403..404,432..433,436,439..440,443,
                     474..475,478,481..482,494,523..524,527,530..531,568..569,
                     572,575..576)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          416..443
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          453..495
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          505..531
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          542..577
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     CDS             1..818
                     /gene="BRAT1"
                     /coded_by="XM_061153783.1:434..2890"
                     /db_xref="GeneID:133063885"
ORIGIN      
        1 mdpecarllp alcavladpr qpvaddtcle klldwfkavt eagssllllq enpclvellf
       61 hvlkpqdlss rilsfalrla gtfaaqencf qylqqgellp glfgeqgplg aaawaaptvr
      121 sgwiqglrsl aqhpsallfl adsgavdtif slqgdpslfv asaagqllvh vldlamrspa
      181 egcgpaeghg rpqardwpac arrivchled clcseatprv tqalhvltta fghchglwtq
      241 glwvqlsplv arllekdpvp aphalvelll svarssvpss dpglwetaaq tlsclspmqa
      301 gplaagilkl qdcpqtlrth afgvllrpla cvleaaaqap gipgllegaa gdpmavdmlp
      361 psksacvgll cstlahlell qplpqrpspw pqapllaaav tilrfcngsa apssevggrl
      421 camlvgcvrv qraaldflgv lsqglgprel vtqvfavlle ylvspdsspt vlkkafqatl
      481 rwllssavpp gccdlepraq lvlgellavl qkrlcspcwe vrdsgleflt qmtrrwggqa
      541 gfrqallase vpkltsqllq dpesyvrasa vaaagqlssr gllaapsspe ypagpqtple
      601 elllvlttds egfprraamr vftewlrdgh vataedrerf varvlqaasg dldwevrvqg
      661 lelalvflqq llgargpgea ppgalaqalr alcrvqlfef afrslfdcdr pvaqkscdll
      721 lflrakaaps gslqeagdsp dvapveaalr rwrageqgqp lgelapeavl avlrsmdlea
      781 lrdtlaessd hverspqsll qdmlatvgvl gdneadcy
//
LOCUS       XP_061009767             818 aa            linear   MAM 02-DEC-2023
DEFINITION  BRCA1-associated ATM activator 1 isoform X3 [Dama dama].
ACCESSION   XP_061009767
VERSION     XP_061009767.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153784.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..818
                     /product="BRCA1-associated ATM activator 1 isoform X3"
                     /calculated_mol_wt=87208
     Region          <6..>86
                     /region_name="GlnE1"
                     /note="Glutamine synthetase adenylyltransferase
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG1391"
                     /db_xref="CDD:441001"
     Site            order(395..396,399,402..403,431..432,435,438..439,442,
                     473..474,477,480..481,493,522..523,526,529..530,567..568,
                     571,574..575)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          415..442
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          452..494
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          504..530
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          541..576
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     CDS             1..818
                     /gene="BRAT1"
                     /coded_by="XM_061153784.1:434..2890"
                     /db_xref="GeneID:133063885"
ORIGIN      
        1 mdpecarllp alcavladpr qpvaddtcle klldwfkavt eagssllllq enpclvellf
       61 hvlkpqdlss rilsfalrla gtfaaqencf qylqgellpg lfgeqgplga aawaaptvrs
      121 gwiqglrsla qhpsallfla dsgavdtifs lqgdpslfva saagqllvhv ldlamrspae
      181 gcgpaeghgr pqardwpaca rrivchledc lcseatprvt qalhvlttaf ghchglwtqg
      241 lwvqlsplva rllekdpvpa phalvellls varssvpssd pglwetaaqt lsclspmqag
      301 plaagilklq dcpqtlrtha fgvllrplac vleaaaqapg ipgllegaag dpmavdmlpp
      361 sksacvgllc stlahlellq plpqrpspwp qapllaaavt ilrfcngsaa pssevggrlc
      421 amlvgcvrvq raaldflgvl sqglgprelv tqvfavlley lvspdssptv lkkafqatlr
      481 wllssavppg ccdlepraql vlgellavlq krlcspcwev rdsglefltq mtrrwggqag
      541 frqallasev pkltsqllqd pesyvrasav aaagqlssrg llaapsspey pagpqktple
      601 elllvlttds egfprraamr vftewlrdgh vataedrerf varvlqaasg dldwevrvqg
      661 lelalvflqq llgargpgea ppgalaqalr alcrvqlfef afrslfdcdr pvaqkscdll
      721 lflrakaaps gslqeagdsp dvapveaalr rwrageqgqp lgelapeavl avlrsmdlea
      781 lrdtlaessd hverspqsll qdmlatvgvl gdneadcy
//
LOCUS       XP_061009768             842 aa            linear   MAM 02-DEC-2023
DEFINITION  IQ domain-containing protein E isoform X1 [Dama dama].
ACCESSION   XP_061009768
VERSION     XP_061009768.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153785.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..842
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..842
                     /product="IQ domain-containing protein E isoform X1"
                     /calculated_mol_wt=94045
     Region          <104..412
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          418..>632
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..842
                     /gene="IQCE"
                     /coded_by="XM_061153785.1:66..2594"
                     /db_xref="GeneID:133063886"
ORIGIN      
        1 mslgtaepas etgddslsai tfdsdsetka krksfhkppp tslkspyhsk prkvaswrsl
       61 rtvasmplgg rmsltpqklc lgsskqgyvp gtliyreked mydeiielkk slnmqksdvd
      121 lmrtklrrle eensrkdrqi eqlldasrgp dfvrtladkr pdtgwvingl kqrvlkleqq
      181 ckekdnmink lqtdvkttsl eemriamety yeeihrlhgl lassettgkr ppvekkvglk
      241 rqkkmgsall slsrsvqelm eenqslkedl drvlsnsptt skitagyadw skprlvrria
      301 elekklssme spkpqasegv rstslspsas sptvhlqere rlrgavqslt gerdalhgql
      361 qerdlevkql lqtkaeleke lesvkegere rrerekvlre elqaltrkfr elegskkeee
      421 deavavapet weepqppspt aspsqpdaep dksqggssrp pstcpegrrd aaarvlqrrw
      481 rgyqyqkera lldeaatvlq aafrghlara rllsnracvs epprvpsppt qdspkprvps
      541 pavqaegdsw qeeavtiiqs afrahlarar ysapgpgptt atvperparp pprapssppc
      601 paatpgqgds egssretakg papenraprl ppcsdssggr sgglvfpsle efstvrcdph
      661 sqrlwcskra eidvflelsc ffndpvdvgn lisgssafsk sslniwkvtv hvllkpglen
      721 lqpsrtntqk rfpfhyrale cksrksrdtw sdrkfglrvt kqsrskanrv lprertghsk
      781 hplpathakt trghhqmant eirliiffaa kdgeapysqq kqdrelteaq imksllpnsd
      841 ln
//
LOCUS       XP_061009769             715 aa            linear   MAM 02-DEC-2023
DEFINITION  IQ domain-containing protein E isoform X2 [Dama dama].
ACCESSION   XP_061009769
VERSION     XP_061009769.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153786.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..715
                     /product="IQ domain-containing protein E isoform X2"
                     /calculated_mol_wt=78980
     Region          <94..385
                     /region_name="Mplasa_alph_rch"
                     /note="helix-rich Mycoplasma protein; TIGR04523"
                     /db_xref="CDD:275316"
     Region          <427..714
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..715
                     /gene="IQCE"
                     /coded_by="XM_061153786.1:66..2213"
                     /db_xref="GeneID:133063886"
ORIGIN      
        1 mslgtaepas etgddslsai tfdsdsetka krksfhkppp tslkspyhsk prkvaswrsl
       61 rtvasmplgg rmsltpqklc lgsskqgyvp gtliyreked mydeiielkk slnmqksdvd
      121 lmrtklrrle eensrkdrqi eqlldasrgp dfvrtladkr pdtgwvingl kqrvlkleqq
      181 ckekdnmink lqtdvkttsl eemriamety yeeihrlhgl lassettgkr ppvekkvglk
      241 rqkkmgsall slsrsvqelm eenqslkedl drvlsnsptt skitagyadw skprlvrria
      301 elekklssme spkpqasegv rstslspsas sptvhlqere rlrgavqslt gerdalhgql
      361 qerdlevkql lqtkaeleke lesvkegere rrerekvlre elqaltrkfr elegskkeee
      421 deavavapet weepqppspt aspsqpdaep dksqggssrp pstcpegrrd aaarvlqrrw
      481 rgyqyqkera lldedslyrg irrpgrfsle nervsgwgrp lasegagasg qeeaatvlqa
      541 afrghlarar llsnracvse pprvpspptq dspkprvpsp avqaegdswq eeavtiiqsa
      601 frahlarary sapgpgptta tvperparpp prapssppcp aatpgqgdse gssretakgp
      661 apenraprlp pcsaeppvsg lqptvpapae dvnsddsdei vlapslptrk saspr
//
LOCUS       XP_061009770             524 aa            linear   MAM 02-DEC-2023
DEFINITION  protein tweety homolog 3 [Dama dama].
ACCESSION   XP_061009770
VERSION     XP_061009770.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153787.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..524
                     /product="protein tweety homolog 3"
                     /calculated_mol_wt=57533
     Region          8..435
                     /region_name="Tweety"
                     /note="pfam04906"
                     /db_xref="CDD:461475"
     Site            order(367,370)
                     /site_type="active"
                     /note="putative pore region [active]"
                     /db_xref="CDD:143653"
     CDS             1..524
                     /gene="TTYH3"
                     /coded_by="XM_061153787.1:36..1610"
                     /db_xref="GeneID:133063888"
ORIGIN      
        1 magvsyaapw wvsllhrlph fdlhweatss qfrpedtdyq qallllgaaa laclaldllf
       61 llfysfwlcc rrrkseehld adccctawcv iiatlvcsag iavgfygnge tsdgihraty
      121 slrhanrtva gvqdrvwdta aalnrtaeps lqslerqlaa rpeplravqr lqgllqtllg
      181 ytaaipfwrn pavslealae qvdlydwyrw lgylglllld vaicllvlvg lirsskgilv
      241 gvcllgvlal iiswgalgle lavsvgssdf cvdpdtyvtr mveehsvlsg dilqyylacs
      301 phavnpfqqk lsgshkalve mqdvvaellk tvsweypatk dpllrvqevl ngtevnlqhl
      361 talvdcrslh ldyvqaltgf cydgvegliy lalfsfvtal mfssvvcsvp htwqqkrgpd
      421 edgeeeaapg prqahdslyr vhmpslyscg ssygsetsip aaahtvsnap vteymsqnan
      481 fqnprcentp ligresppps ytssmrakyl atsqprpess ssgh
//
LOCUS       XP_061009771             379 aa            linear   MAM 02-DEC-2023
DEFINITION  beta-1,3-N-acetylglucosaminyltransferase lunatic fringe [Dama
            dama].
ACCESSION   XP_061009771
VERSION     XP_061009771.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153788.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..379
                     /product="beta-1,3-N-acetylglucosaminyltransferase lunatic
                     fringe"
                     /calculated_mol_wt=41707
     Region          110..358
                     /region_name="Fringe"
                     /note="Fringe-like; pfam02434"
                     /db_xref="CDD:367085"
     CDS             1..379
                     /gene="LFNG"
                     /coded_by="XM_061153788.1:66..1205"
                     /db_xref="GeneID:133063889"
ORIGIN      
        1 mlkrcgrrll lalagallac llvltadppp ppvpaergrr alrslagpsg aatapgleaa
       61 aaapgapvre vhslseyfsl ltrsrrdagp ppggvprpad grprppveql aprdvfiavk
      121 ttkkfhrarl dllletwisr heemtfiftd gedealarrt ghvvntncsa ahsrqalsck
      181 maveydrfie sgrkwfchvd ddnyvnvral lrllgsypht qdvylgkpsl drpiqaterv
      241 senkvrpvhf wfatggagfc isrglalkms pwasgghfms taerirlpdd ctigyiveal
      301 lgvplvrcgl fhshlenlqq vpaselheqv tlsygmfenk rnavhikgpf sveadpsrfr
      361 sihchlypdt pwcprtail
//
LOCUS       XP_061009772             211 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133063890 isoform X1 [Dama dama].
ACCESSION   XP_061009772
VERSION     XP_061009772.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153789.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..211
                     /product="uncharacterized protein LOC133063890 isoform X1"
                     /calculated_mol_wt=22370
     CDS             1..211
                     /gene="LOC133063890"
                     /coded_by="XM_061153789.1:485..1120"
                     /db_xref="GeneID:133063890"
ORIGIN      
        1 mrvracgrpg vsageegtvr aaggrgpstl ppsmpprptq laaspervpg sglrldrepg
       61 lpgegghprw vpqlpsthci rpahagpslv pifpqeetga qrprrwwwgv spaarahntl
      121 rqaglctrha wvrwaaragr aaeegtflpv crraqagags swplpvgppr frrailagve
      181 epgwhswsfd vasseaclra qavaadpcae p
//
LOCUS       XP_061009773             128 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133063890 isoform X2 [Dama dama].
ACCESSION   XP_061009773
VERSION     XP_061009773.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153790.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..128
                     /product="uncharacterized protein LOC133063890 isoform X2"
                     /calculated_mol_wt=13829
     CDS             1..128
                     /gene="LOC133063890"
                     /coded_by="XM_061153790.1:568..954"
                     /db_xref="GeneID:133063890"
ORIGIN      
        1 mlesrrgagc eseetgaqrp rrwwwgvspa arahntlrqa glctrhawvr waaragraae
       61 egtflpvcrr aqagagsswp lpvgpprfrr ailagveepg whswsfdvas seaclraqav
      121 aadpcaep
//
LOCUS       XP_061009774             157 aa            linear   MAM 02-DEC-2023
DEFINITION  grifin [Dama dama].
ACCESSION   XP_061009774
VERSION     XP_061009774.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153791.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..157
                     /product="grifin"
                     /calculated_mol_wt=17231
     Region          24..144
                     /region_name="Gal-bind_lectin"
                     /note="Galactoside-binding lectin; smart00908"
                     /db_xref="CDD:214904"
     Site            order(27..29,32,35,101..103,108,110,113)
                     /site_type="other"
                     /note="putative alternate dimerization interface
                     [polypeptide binding]"
                     /db_xref="CDD:238025"
     Site            order(59,61,63,70,72,79,82,84)
                     /site_type="other"
                     /note="sugar binding pocket [chemical binding]"
                     /db_xref="CDD:238025"
     CDS             1..157
                     /gene="GRIFIN"
                     /coded_by="XM_061153791.1:245..718"
                     /db_xref="GeneID:133063891"
ORIGIN      
        1 mqalggmreg hclelstfea fhagglapgw nllvqghsds gedqfeinfl setgdivfhi
       61 kprfssatmv antfqggrwg qeevssifpl vlgepfemev ssdaehfhvh aqehkvlqfa
      121 hrhrplaait rvqvlsdhrl aqvelarkgl swgaggy
//
LOCUS       XP_061009775             419 aa            linear   MAM 02-DEC-2023
DEFINITION  carbohydrate sulfotransferase 12 [Dama dama].
ACCESSION   XP_061009775
VERSION     XP_061009775.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153792.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..419
                     /product="carbohydrate sulfotransferase 12"
                     /calculated_mol_wt=49071
     Region          165..411
                     /region_name="Sulfotransfer_2"
                     /note="Sulfotransferase family; pfam03567"
                     /db_xref="CDD:427369"
     CDS             1..419
                     /gene="CHST12"
                     /coded_by="XM_061153792.1:144..1403"
                     /db_xref="GeneID:133063892"
ORIGIN      
        1 mdtmtksrlf rlwlvlgsvf milliivywd nmgsthfnlh kslsrphvlk pfpspnsapg
       61 dvftssleiw esfvrekqrp llgkrveqps lpasskpvlg nleesvrgyd wsshtaqqsp
      121 dpdgrqaerr svlrefcana sfvfptkers fddipnyeln hlivddrhgv iycyvpkvac
      181 tnwkrvmivl sqslsdqgtp yrdpldipre yvhnssthlt fnkfwrrygk fsrhlmkikl
      241 kkytkflfvr dpfvrlisaf rskfelenee fyqkfavpml rmysnhsslp asvseafsag
      301 lrvsfanfiq ylldphteel apfnehwrqv hrlchpcqid ydfvgkletl dqdaaqllrl
      361 lkvdrllqfp psyrnrtass weegwfanip lawrqqlykl yeadfvlfgy pkpenllrd
//
LOCUS       XP_061009776             419 aa            linear   MAM 02-DEC-2023
DEFINITION  carbohydrate sulfotransferase 12 [Dama dama].
ACCESSION   XP_061009776
VERSION     XP_061009776.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153793.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..419
                     /product="carbohydrate sulfotransferase 12"
                     /calculated_mol_wt=49071
     Region          165..411
                     /region_name="Sulfotransfer_2"
                     /note="Sulfotransferase family; pfam03567"
                     /db_xref="CDD:427369"
     CDS             1..419
                     /gene="CHST12"
                     /coded_by="XM_061153793.1:146..1405"
                     /db_xref="GeneID:133063892"
ORIGIN      
        1 mdtmtksrlf rlwlvlgsvf milliivywd nmgsthfnlh kslsrphvlk pfpspnsapg
       61 dvftssleiw esfvrekqrp llgkrveqps lpasskpvlg nleesvrgyd wsshtaqqsp
      121 dpdgrqaerr svlrefcana sfvfptkers fddipnyeln hlivddrhgv iycyvpkvac
      181 tnwkrvmivl sqslsdqgtp yrdpldipre yvhnssthlt fnkfwrrygk fsrhlmkikl
      241 kkytkflfvr dpfvrlisaf rskfelenee fyqkfavpml rmysnhsslp asvseafsag
      301 lrvsfanfiq ylldphteel apfnehwrqv hrlchpcqid ydfvgkletl dqdaaqllrl
      361 lkvdrllqfp psyrnrtass weegwfanip lawrqqlykl yeadfvlfgy pkpenllrd
//
LOCUS       XP_061009777             419 aa            linear   MAM 02-DEC-2023
DEFINITION  carbohydrate sulfotransferase 12 [Dama dama].
ACCESSION   XP_061009777
VERSION     XP_061009777.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153794.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..419
                     /product="carbohydrate sulfotransferase 12"
                     /calculated_mol_wt=49071
     Region          165..411
                     /region_name="Sulfotransfer_2"
                     /note="Sulfotransferase family; pfam03567"
                     /db_xref="CDD:427369"
     CDS             1..419
                     /gene="CHST12"
                     /coded_by="XM_061153794.1:166..1425"
                     /db_xref="GeneID:133063892"
ORIGIN      
        1 mdtmtksrlf rlwlvlgsvf milliivywd nmgsthfnlh kslsrphvlk pfpspnsapg
       61 dvftssleiw esfvrekqrp llgkrveqps lpasskpvlg nleesvrgyd wsshtaqqsp
      121 dpdgrqaerr svlrefcana sfvfptkers fddipnyeln hlivddrhgv iycyvpkvac
      181 tnwkrvmivl sqslsdqgtp yrdpldipre yvhnssthlt fnkfwrrygk fsrhlmkikl
      241 kkytkflfvr dpfvrlisaf rskfelenee fyqkfavpml rmysnhsslp asvseafsag
      301 lrvsfanfiq ylldphteel apfnehwrqv hrlchpcqid ydfvgkletl dqdaaqllrl
      361 lkvdrllqfp psyrnrtass weegwfanip lawrqqlykl yeadfvlfgy pkpenllrd
//
LOCUS       XP_061009778             419 aa            linear   MAM 02-DEC-2023
DEFINITION  carbohydrate sulfotransferase 12 [Dama dama].
ACCESSION   XP_061009778
VERSION     XP_061009778.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153795.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..419
                     /product="carbohydrate sulfotransferase 12"
                     /calculated_mol_wt=49071
     Region          165..411
                     /region_name="Sulfotransfer_2"
                     /note="Sulfotransferase family; pfam03567"
                     /db_xref="CDD:427369"
     CDS             1..419
                     /gene="CHST12"
                     /coded_by="XM_061153795.1:93..1352"
                     /db_xref="GeneID:133063892"
ORIGIN      
        1 mdtmtksrlf rlwlvlgsvf milliivywd nmgsthfnlh kslsrphvlk pfpspnsapg
       61 dvftssleiw esfvrekqrp llgkrveqps lpasskpvlg nleesvrgyd wsshtaqqsp
      121 dpdgrqaerr svlrefcana sfvfptkers fddipnyeln hlivddrhgv iycyvpkvac
      181 tnwkrvmivl sqslsdqgtp yrdpldipre yvhnssthlt fnkfwrrygk fsrhlmkikl
      241 kkytkflfvr dpfvrlisaf rskfelenee fyqkfavpml rmysnhsslp asvseafsag
      301 lrvsfanfiq ylldphteel apfnehwrqv hrlchpcqid ydfvgkletl dqdaaqllrl
      361 lkvdrllqfp psyrnrtass weegwfanip lawrqqlykl yeadfvlfgy pkpenllrd
//
LOCUS       XP_061009779             788 aa            linear   MAM 02-DEC-2023
DEFINITION  eukaryotic translation initiation factor 3 subunit B [Dama dama].
ACCESSION   XP_061009779
VERSION     XP_061009779.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153796.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..788
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..788
                     /product="eukaryotic translation initiation factor 3
                     subunit B"
                     /calculated_mol_wt=89084
     Region          <3..>177
                     /region_name="PHA03169"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:223003"
     Region          158..238
                     /region_name="RRM_eIF3B"
                     /note="RNA recognition motif (RRM) found in eukaryotic
                     translation initiation factor 3 subunit B (eIF-3B) and
                     similar proteins; cd12278"
                     /db_xref="CDD:409720"
     Site            order(160,162,164..165,195,204,206,208,236,238)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:409720"
     Site            order(163,166,173,176..177,179..181,183..184,187,223..226,
                     228..229,234..235)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:409720"
     Region          279..779
                     /region_name="COG5354"
                     /note="Uncharacterized protein, contains Trp-Asp (WD)
                     repeat [General function prediction only]"
                     /db_xref="CDD:227657"
     Region          312..345
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          350..397
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          403..437
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          441..480
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          488..519
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          530..578
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          586..621
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          628..658
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..788
                     /gene="EIF3B"
                     /coded_by="XM_061153796.1:116..2482"
                     /db_xref="GeneID:133063894"
ORIGIN      
        1 mqdaenvaap eaaeqraepg peqpaaepsp gaevarpgvq eaaggedaea eagpgpegpa
       61 epaadgeeka datpgatppp peefpaplag egpaeqaqda aaeagsegag gepdgaaedg
      121 gadepsfsdp edfvddvsee ellgdvlkdr pqeadgidsv ivvdnvpqvg pdrleklknv
      181 ihkifskfgk itndfypeed grtkgyifle yaspahalda vknadgykld kqhtfrvnlf
      241 tdfdkymtis dewdipekqp fkdlgnlryw leeaecrdqy svifesgdrt sifwndvkdp
      301 vsieerarwt etyvrwspkg tylatfhqrg ialwggekfk qiqrfshqgv qlidfspcer
      361 ylvtfsplmd tqddpqaiii wdiltgqkkr gfhcessahw pifkwshdgk ffarmtldtl
      421 siyetpsmgl ldkkslkisg ikdfswspgg niiafwvped kdiparvtlm qlptrqeirv
      481 rnlfnvvdck lhwqkngdyl cvkvdrtpkg tqgvvtnfei frmrekqvpv dvvemketii
      541 afawepngsk favlhgeapr isvsfyhvks ngkielikmf dkqqantifw spqgqfvvla
      601 glrsmngala fvdtsdctvm niaehymasd vewdptgryv vtsvswwshk vdnaywlwtf
      661 qgrllqknsk drfcqllwrp rpptllsqdq ikqikkdlkk yskifeqkdr lsqskaskel
      721 verrrtmmed frkyrkmaqe lymeqknarl elrggvdtde ldsnvddwee etieffvtee
      781 iiplgnqe
//
LOCUS       XP_061009780             717 aa            linear   MAM 02-DEC-2023
DEFINITION  mitotic spindle assembly checkpoint protein MAD1 isoform X1 [Dama
            dama].
ACCESSION   XP_061009780
VERSION     XP_061009780.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153797.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..717
                     /product="mitotic spindle assembly checkpoint protein MAD1
                     isoform X1"
                     /calculated_mol_wt=82329
     Region          54..715
                     /region_name="MAD"
                     /note="Mitotic checkpoint protein; pfam05557"
                     /db_xref="CDD:461677"
     CDS             1..717
                     /gene="MAD1L1"
                     /coded_by="XM_061153797.1:577..2730"
                     /db_xref="GeneID:133063895"
ORIGIN      
        1 medlgenttv lstlrslnnf isqrveggsg ldvsasaqgs lqmqyqqsmq leeraeqirs
       61 kshliqvere kmqmelshkr arveleraas asarsyerem drnqdllari rqlqereaea
      121 eekmkqqler hrlcqqslda agrrlreked slaeagetit alkgrlsdlq wsvmnqemqv
      181 krlesekqel keqldlqhqk wqeanqkvqe lqasqeglad qgqrikdleq klslqeqdaa
      241 ivknmrselv rlptmerelr qlreenaclr etrdangllr keleglqrrl gqqekmqetl
      301 vdlelekerl ltklqswerl dqatglsirt pedlsrfive lqqrelalkd rnssitssar
      361 elekarlqlq devrqlgsql leerkrreth ealarrlqkr vllltkerdg mrailgsyds
      421 eltpaehspq ltrrmreaed lvqkvhahss eveaqlsqal eelggqkqra dmlemelkil
      481 ksqagpaeqs flfsreevss lrlkveelea ersrleeekk aleaqlerlt lqgdydqskt
      541 kvlhlslnpa gaarqrlreg qqqlqeecar lqelvralea ggpipahlea aaglpssrev
      601 aelkkqvesa elknqrlkev fqtkiqefrk vcytltgyqv dittenqyrl tsmyaeqkad
      661 clifkavgps gtkmqlleta fsrtvpglie lhllqqdsip aflsaltldl fsrqtla
//
LOCUS       XP_061009781             670 aa            linear   MAM 02-DEC-2023
DEFINITION  mitotic spindle assembly checkpoint protein MAD1 isoform X2 [Dama
            dama].
ACCESSION   XP_061009781
VERSION     XP_061009781.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153798.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..670
                     /product="mitotic spindle assembly checkpoint protein MAD1
                     isoform X2"
                     /calculated_mol_wt=76984
     Region          54..668
                     /region_name="MAD"
                     /note="Mitotic checkpoint protein; pfam05557"
                     /db_xref="CDD:461677"
     CDS             1..670
                     /gene="MAD1L1"
                     /coded_by="XM_061153798.1:597..2609"
                     /db_xref="GeneID:133063895"
ORIGIN      
        1 medlgenttv lstlrslnnf isqrveggsg ldvsasaqgs lqmqyqqsmq leeraeqirs
       61 kshliqvere kmqmelshkr arveleraas asarsyerem drnqdllari rqlqereaea
      121 eekmkqqler hrlcqqslda agrrlreked slaeagetit alkgrlsdlq wsvmnqemqv
      181 krlesekqel keqldlqhqk wqeanqkvqe lqasqeglad qgqrikdleq klslqeqdaa
      241 ivknmrselv rlptmerelr qlreenaclr etrdangllr keleglqrrl gqqekmqetl
      301 vdlelekerl ltklqswerl dqatglsirt pedlsrfive lqqrelalkd rnssitssar
      361 elekarlqlq devrqlgsql leerkrreth ealarrlqkr vllltkaqls qaleelggqk
      421 qradmlemel kilksqagpa eqsflfsree vsslrlkvee leaersrlee ekkaleaqle
      481 rltlqgdydq sktkvlhlsl npagaarqrl regqqqlqee carlqelvra leaggpipah
      541 leaaaglpss revaelkkqv esaelknqrl kevfqtkiqe frkvcytltg yqvdittenq
      601 yrltsmyaeq kadclifkav gpsgtkmqll etafsrtvpg lielhllqqd sipaflsalt
      661 ldlfsrqtla
//
LOCUS       XP_061009782             307 aa            linear   MAM 02-DEC-2023
DEFINITION  mitotic spindle assembly checkpoint protein MAD1 isoform X3 [Dama
            dama].
ACCESSION   XP_061009782
VERSION     XP_061009782.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153799.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..307
                     /product="mitotic spindle assembly checkpoint protein MAD1
                     isoform X3"
                     /calculated_mol_wt=34413
     Region          <1..305
                     /region_name="MAD"
                     /note="Mitotic checkpoint protein; pfam05557"
                     /db_xref="CDD:461677"
     CDS             1..307
                     /gene="MAD1L1"
                     /coded_by="XM_061153799.1:712..1635"
                     /db_xref="GeneID:133063895"
ORIGIN      
        1 mrailgsyds eltpaehspq ltrrmreaed lvqkvhahss eveaqlsqal eelggqkqra
       61 dmlemelkil ksqagpaeqs flfsreevss lrlkveelea ersrleeekk aleaqlerlt
      121 lqgdydqskt kvlhlslnpa gaarqrlreg qqqlqeecar lqelvralea ggpipahlea
      181 aaglpssrev aelkkqvesa elknqrlkev fqtkiqefrk vcytltgyqv dittenqyrl
      241 tsmyaeqkad clifkavgps gtkmqlleta fsrtvpglie lhllqqdsip aflsaltldl
      301 fsrqtla
//
LOCUS       XP_061009784             459 aa            linear   MAM 02-DEC-2023
DEFINITION  sorting nexin-8 isoform X1 [Dama dama].
ACCESSION   XP_061009784
VERSION     XP_061009784.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153801.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..459
                     /product="sorting nexin-8 isoform X1"
                     /calculated_mol_wt=51415
     Region          70..173
                     /region_name="PX_SNX8_Mvp1p_like"
                     /note="The phosphoinositide binding Phox Homology domain
                     of Sorting Nexin 8 and yeast Mvp1p; cd06866"
                     /db_xref="CDD:132776"
     Site            order(104..106,130..131,143)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132776"
     Region          190..435
                     /region_name="BAR_SNX8"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of Sorting
                     Nexin 8; cd07597"
                     /db_xref="CDD:153281"
     Site            order(212,215..216,220,222..223,226..227,229..230,
                     247..248,250..251,254..255,257..258,261,290,293..294,396,
                     399..400,402,407,410..411,413..414,417..418,421..422,
                     424..425,428..429,431..432)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153281"
     Site            order(212,215..216,220,222..223,226,229..230,247..248,
                     250..251,254,257..258,261,290,396,399..400,402,407,
                     410..411,413..415,417..418,421..422,424..425,429,431..432)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153281"
     CDS             1..459
                     /gene="SNX8"
                     /coded_by="XM_061153801.1:35..1414"
                     /db_xref="GeneID:133063896"
ORIGIN      
        1 mtggamdplp tapgaaaaea qadeeadppa adspvppvse praldagrmq vppgnpllls
       61 ltlqellard avqvelvpek kglflkhvey evssqrfksc vyrryndfvv fhetllhkfp
      121 yrmvpalppk rmlgadrefi earrralkrf inlvarhppf sedvilklfl sfsgpdvqnk
      181 lkesaqcvgd efmncklaar akdflpadiq tqfamsreli rniynsfhkl rdraermvsr
      241 aidnaadlli fgkelsalgs dttplpswas lnsgtwgslk qalkglsvef alladkaaqq
      301 gkqeendvve klnlfldllq sykdlcerhe kgvlhkhqra lhkyslmkrq mmsaaaqsre
      361 pesveqlesr iveqenviqt melrnyfsly clhqetqlvh vylpltshil gafvnsqiqg
      421 hkemskvwnd lqpklrclfv gppgapappr ppqdglsah
//
LOCUS       XP_061009785             450 aa            linear   MAM 02-DEC-2023
DEFINITION  sorting nexin-8 isoform X2 [Dama dama].
ACCESSION   XP_061009785
VERSION     XP_061009785.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153802.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..450
                     /product="sorting nexin-8 isoform X2"
                     /calculated_mol_wt=51219
     Region          61..164
                     /region_name="PX_SNX8_Mvp1p_like"
                     /note="The phosphoinositide binding Phox Homology domain
                     of Sorting Nexin 8 and yeast Mvp1p; cd06866"
                     /db_xref="CDD:132776"
     Site            order(95..97,121..122,134)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132776"
     Region          181..426
                     /region_name="BAR_SNX8"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of Sorting
                     Nexin 8; cd07597"
                     /db_xref="CDD:153281"
     Site            order(203,206..207,211,213..214,217..218,220..221,
                     238..239,241..242,245..246,248..249,252,281,284..285,387,
                     390..391,393,398,401..402,404..405,408..409,412..413,
                     415..416,419..420,422..423)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153281"
     Site            order(203,206..207,211,213..214,217,220..221,238..239,
                     241..242,245,248..249,252,281,387,390..391,393,398,
                     401..402,404..406,408..409,412..413,415..416,420,422..423)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153281"
     CDS             1..450
                     /gene="SNX8"
                     /coded_by="XM_061153802.1:21..1373"
                     /db_xref="GeneID:133063896"
ORIGIN      
        1 mlfwwkccrp ecpsshehpl vldspvppvs epraldagrm qvppgnplll sltlqellar
       61 davqvelvpe kkglflkhve yevssqrfks cvyrryndfv vfhetllhkf pyrmvpalpp
      121 krmlgadref iearrralkr finlvarhpp fsedvilklf lsfsgpdvqn klkesaqcvg
      181 defmncklaa rakdflpadi qtqfamsrel irniynsfhk lrdraermvs raidnaadll
      241 ifgkelsalg sdttplpswa slnsgtwgsl kqalkglsve falladkaaq qgkqeendvv
      301 eklnlfldll qsykdlcerh ekgvlhkhqr alhkyslmkr qmmsaaaqsr epesveqles
      361 riveqenviq tmelrnyfsl yclhqetqlv hvylpltshi lgafvnsqiq ghkemskvwn
      421 dlqpklrclf vgppgapapp rppqdglsah
//
LOCUS       XP_061009786             429 aa            linear   MAM 02-DEC-2023
DEFINITION  sorting nexin-8 isoform X3 [Dama dama].
ACCESSION   XP_061009786
VERSION     XP_061009786.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153803.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..429
                     /product="sorting nexin-8 isoform X3"
                     /calculated_mol_wt=48668
     Region          40..143
                     /region_name="PX_SNX8_Mvp1p_like"
                     /note="The phosphoinositide binding Phox Homology domain
                     of Sorting Nexin 8 and yeast Mvp1p; cd06866"
                     /db_xref="CDD:132776"
     Site            order(74..76,100..101,113)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132776"
     Region          160..405
                     /region_name="BAR_SNX8"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of Sorting
                     Nexin 8; cd07597"
                     /db_xref="CDD:153281"
     Site            order(182,185..186,190,192..193,196..197,199..200,
                     217..218,220..221,224..225,227..228,231,260,263..264,366,
                     369..370,372,377,380..381,383..384,387..388,391..392,
                     394..395,398..399,401..402)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153281"
     Site            order(182,185..186,190,192..193,196,199..200,217..218,
                     220..221,224,227..228,231,260,366,369..370,372,377,
                     380..381,383..385,387..388,391..392,394..395,399,401..402)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153281"
     CDS             1..429
                     /gene="SNX8"
                     /coded_by="XM_061153803.1:16..1305"
                     /db_xref="GeneID:133063896"
ORIGIN      
        1 mnspvppvse praldagrmq vppgnpllls ltlqellard avqvelvpek kglflkhvey
       61 evssqrfksc vyrryndfvv fhetllhkfp yrmvpalppk rmlgadrefi earrralkrf
      121 inlvarhppf sedvilklfl sfsgpdvqnk lkesaqcvgd efmncklaar akdflpadiq
      181 tqfamsreli rniynsfhkl rdraermvsr aidnaadlli fgkelsalgs dttplpswas
      241 lnsgtwgslk qalkglsvef alladkaaqq gkqeendvve klnlfldllq sykdlcerhe
      301 kgvlhkhqra lhkyslmkrq mmsaaaqsre pesveqlesr iveqenviqt melrnyfsly
      361 clhqetqlvh vylpltshil gafvnsqiqg hkemskvwnd lqpklrclfv gppgapappr
      421 ppqdglsah
//
LOCUS       XP_061009787             411 aa            linear   MAM 02-DEC-2023
DEFINITION  sorting nexin-8 isoform X4 [Dama dama].
ACCESSION   XP_061009787
VERSION     XP_061009787.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153804.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..411
                     /product="sorting nexin-8 isoform X4"
                     /calculated_mol_wt=46793
     Region          22..125
                     /region_name="PX_SNX8_Mvp1p_like"
                     /note="The phosphoinositide binding Phox Homology domain
                     of Sorting Nexin 8 and yeast Mvp1p; cd06866"
                     /db_xref="CDD:132776"
     Site            order(56..58,82..83,95)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132776"
     Region          142..387
                     /region_name="BAR_SNX8"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of Sorting
                     Nexin 8; cd07597"
                     /db_xref="CDD:153281"
     Site            order(164,167..168,172,174..175,178..179,181..182,
                     199..200,202..203,206..207,209..210,213,242,245..246,348,
                     351..352,354,359,362..363,365..366,369..370,373..374,
                     376..377,380..381,383..384)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153281"
     Site            order(164,167..168,172,174..175,178,181..182,199..200,
                     202..203,206,209..210,213,242,348,351..352,354,359,
                     362..363,365..367,369..370,373..374,376..377,381,383..384)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153281"
     CDS             1..411
                     /gene="SNX8"
                     /coded_by="XM_061153804.1:195..1430"
                     /db_xref="GeneID:133063896"
ORIGIN      
        1 mqvppgnpll lsltlqella rdavqvelvp ekkglflkhv eyevssqrfk scvyrryndf
       61 vvfhetllhk fpyrmvpalp pkrmlgadre fiearrralk rfinlvarhp pfsedvilkl
      121 flsfsgpdvq nklkesaqcv gdefmnckla arakdflpad iqtqfamsre lirniynsfh
      181 klrdraermv sraidnaadl lifgkelsal gsdttplpsw aslnsgtwgs lkqalkglsv
      241 efalladkaa qqgkqeendv veklnlfldl lqsykdlcer hekgvlhkhq ralhkyslmk
      301 rqmmsaaaqs repesveqle sriveqenvi qtmelrnyfs lyclhqetql vhvylpltsh
      361 ilgafvnsqi qghkemskvw ndlqpklrcl fvgppgapap prppqdglsa h
//
LOCUS       XP_061009788             247 aa            linear   MAM 02-DEC-2023
DEFINITION  oxidized purine nucleoside triphosphate hydrolase isoform X1 [Dama
            dama].
ACCESSION   XP_061009788
VERSION     XP_061009788.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153805.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..247
                     /product="oxidized purine nucleoside triphosphate
                     hydrolase isoform X1"
                     /calculated_mol_wt=27645
     Region          96..230
                     /region_name="NUDIX_MTH1_Nudt1"
                     /note="MutT homolog-1 (MTH1); cd03427"
                     /db_xref="CDD:467533"
     CDS             1..247
                     /gene="NUDT1"
                     /coded_by="XM_061153805.1:143..886"
                     /db_xref="GeneID:133063897"
ORIGIN      
        1 mwaadrqphp mtrvqphgal vsvthasglr csaratppta appplpkgls sprpavapre
       61 pwpvraqtvr sshlagadpt pfragreptg tmrtsrlytl vlvlqpqrvl lgmkkrgfga
      121 grwngfggkv qegetiedga krelqeesgl tvdrlhkvgq itfeftgdpe lmdvhvfctd
      181 svqgtpvesd emrpqwfrld qipfrdmwpd dsywfplllq rkkfrgyfkf qgqdtildyt
      241 lrevdav
//
LOCUS       XP_061009789             180 aa            linear   MAM 02-DEC-2023
DEFINITION  oxidized purine nucleoside triphosphate hydrolase isoform X2 [Dama
            dama].
ACCESSION   XP_061009789
VERSION     XP_061009789.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153806.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..180
                     /product="oxidized purine nucleoside triphosphate
                     hydrolase isoform X2"
                     /calculated_mol_wt=19084
     Region          96..>141
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
     CDS             1..180
                     /gene="NUDT1"
                     /coded_by="XM_061153806.1:150..692"
                     /db_xref="GeneID:133063897"
ORIGIN      
        1 mwaadrqphp mtrvqphgal vsvthasglr csaratppta appplpkgls sprpavapre
       61 pwpvraqtvr sshlagadpt pfragreptg tmrtsrlytl vlvlqpqrvl lgmkkrgfga
      121 grwngfggkv qegetiedga ksqgagqslg ffidsgelmm sylgpftdsl rssstpttfp
//
LOCUS       XP_061009790             178 aa            linear   MAM 02-DEC-2023
DEFINITION  oxidized purine nucleoside triphosphate hydrolase isoform X3 [Dama
            dama].
ACCESSION   XP_061009790
VERSION     XP_061009790.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153807.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..178
                     /product="oxidized purine nucleoside triphosphate
                     hydrolase isoform X3"
                     /calculated_mol_wt=18700
     Region          96..>144
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
     CDS             1..178
                     /gene="NUDT1"
                     /coded_by="XM_061153807.1:150..686"
                     /db_xref="GeneID:133063897"
ORIGIN      
        1 mwaadrqphp mtrvqphgal vsvthasglr csaratppta appplpkgls sprpavapre
       61 pwpvraqtvr sshlagadpt pfragreptg tmrtsrlytl vlvlqpqrvl lgmkkrgfga
      121 grwngfggkv qegetiedga krhldftvas hppacpqgaa ggeradrgqa aqggpdhv
//
LOCUS       XP_061009791             156 aa            linear   MAM 02-DEC-2023
DEFINITION  oxidized purine nucleoside triphosphate hydrolase isoform X4 [Dama
            dama].
ACCESSION   XP_061009791
VERSION     XP_061009791.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153808.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..156
                     /product="oxidized purine nucleoside triphosphate
                     hydrolase isoform X4"
                     /calculated_mol_wt=18081
     Region          5..139
                     /region_name="NUDIX_MTH1_Nudt1"
                     /note="MutT homolog-1 (MTH1); cd03427"
                     /db_xref="CDD:467533"
     CDS             1..156
                     /gene="NUDT1"
                     /coded_by="XM_061153808.1:92..562"
                     /db_xref="GeneID:133063897"
ORIGIN      
        1 mrtsrlytlv lvlqpqrvll gmkkrgfgag rwngfggkvq egetiedgak relqeesglt
       61 vdrlhkvgqi tfeftgdpel mdvhvfctds vqgtpvesde mrpqwfrldq ipfrdmwpdd
      121 sywfplllqr kkfrgyfkfq gqdtildytl revdav
//
LOCUS       XP_061009792             243 aa            linear   MAM 02-DEC-2023
DEFINITION  rRNA methyltransferase 2, mitochondrial [Dama dama].
ACCESSION   XP_061009792
VERSION     XP_061009792.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153809.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..243
                     /product="rRNA methyltransferase 2, mitochondrial"
                     /calculated_mol_wt=26820
     Region          25..239
                     /region_name="RlmE"
                     /note="23S rRNA U2552 (ribose-2'-O)-methylase RlmE/FtsJ
                     [Translation, ribosomal structure and biogenesis];
                     COG0293"
                     /db_xref="CDD:440062"
     CDS             1..243
                     /gene="MRM2"
                     /coded_by="XM_061153809.1:44..775"
                     /db_xref="GeneID:133063899"
ORIGIN      
        1 magtlklvwa slqrqrfhtt gscykgrtga ehlwltrhlr dpfvkaakve syrcrsafkl
       61 lemnerhqil rpglrvldcg aapgawsqva vqrvnaagtd psapvgfvlg vdllhifple
      121 gatflcpadv tdprtfrkiq ellpggradv ilsdmapnat girgldhdtl islclslldm
      181 vpdvlhpggt flcktwagsq shrlqkrlse efqntrtvkp easrkessev ylmatqyrgs
      241 rev
//
LOCUS       XP_061009793             414 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 184A isoform X1 [Dama dama].
ACCESSION   XP_061009793
VERSION     XP_061009793.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153810.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..414
                     /product="transmembrane protein 184A isoform X1"
                     /calculated_mol_wt=45374
     Region          45..319
                     /region_name="Solute_trans_a"
                     /note="Organic solute transporter Ostalpha; pfam03619"
                     /db_xref="CDD:460991"
     CDS             1..414
                     /gene="TMEM184A"
                     /coded_by="XM_061153810.1:205..1449"
                     /db_xref="GeneID:133063900"
ORIGIN      
        1 mtdapglpgh plvwtppagp agpqmertgn gsqgagplfl tsplargisg ifvwaalvlt
       61 ghqiylhlra ytvpneqryi irlllvvpvy afdswlslll lgaqqhyvyl dsvrdcyeaf
      121 viysflslcf qylggesaim aeirgkpirt scfhgtcclr gmtysigflr fckqatlqfc
      181 ivkpimalvt ivlqafgkyh dgdfnvrsgy lyvtlvynas vslalyalfl fysatsellr
      241 pfepvlkflt ikaviflsfw qglllailer cgvipevqvi dgntvgagtv aagyqnfiic
      301 iemlfasial ryaftcqvys ekkdhspaps apmqsissgl ketmspqdiv qdaihnfspa
      361 yqqytqqatq eaarpaqgra pspctpphgp nggpgggrkg rnmekrmlip eeel
//
LOCUS       XP_061009794             414 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 184A isoform X1 [Dama dama].
ACCESSION   XP_061009794
VERSION     XP_061009794.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153811.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..414
                     /product="transmembrane protein 184A isoform X1"
                     /calculated_mol_wt=45374
     Region          45..319
                     /region_name="Solute_trans_a"
                     /note="Organic solute transporter Ostalpha; pfam03619"
                     /db_xref="CDD:460991"
     CDS             1..414
                     /gene="TMEM184A"
                     /coded_by="XM_061153811.1:87..1331"
                     /db_xref="GeneID:133063900"
ORIGIN      
        1 mtdapglpgh plvwtppagp agpqmertgn gsqgagplfl tsplargisg ifvwaalvlt
       61 ghqiylhlra ytvpneqryi irlllvvpvy afdswlslll lgaqqhyvyl dsvrdcyeaf
      121 viysflslcf qylggesaim aeirgkpirt scfhgtcclr gmtysigflr fckqatlqfc
      181 ivkpimalvt ivlqafgkyh dgdfnvrsgy lyvtlvynas vslalyalfl fysatsellr
      241 pfepvlkflt ikaviflsfw qglllailer cgvipevqvi dgntvgagtv aagyqnfiic
      301 iemlfasial ryaftcqvys ekkdhspaps apmqsissgl ketmspqdiv qdaihnfspa
      361 yqqytqqatq eaarpaqgra pspctpphgp nggpgggrkg rnmekrmlip eeel
//
LOCUS       XP_061009796             414 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 184A isoform X1 [Dama dama].
ACCESSION   XP_061009796
VERSION     XP_061009796.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153813.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..414
                     /product="transmembrane protein 184A isoform X1"
                     /calculated_mol_wt=45374
     Region          45..319
                     /region_name="Solute_trans_a"
                     /note="Organic solute transporter Ostalpha; pfam03619"
                     /db_xref="CDD:460991"
     CDS             1..414
                     /gene="TMEM184A"
                     /coded_by="XM_061153813.1:20..1264"
                     /db_xref="GeneID:133063900"
ORIGIN      
        1 mtdapglpgh plvwtppagp agpqmertgn gsqgagplfl tsplargisg ifvwaalvlt
       61 ghqiylhlra ytvpneqryi irlllvvpvy afdswlslll lgaqqhyvyl dsvrdcyeaf
      121 viysflslcf qylggesaim aeirgkpirt scfhgtcclr gmtysigflr fckqatlqfc
      181 ivkpimalvt ivlqafgkyh dgdfnvrsgy lyvtlvynas vslalyalfl fysatsellr
      241 pfepvlkflt ikaviflsfw qglllailer cgvipevqvi dgntvgagtv aagyqnfiic
      301 iemlfasial ryaftcqvys ekkdhspaps apmqsissgl ketmspqdiv qdaihnfspa
      361 yqqytqqatq eaarpaqgra pspctpphgp nggpgggrkg rnmekrmlip eeel
//
LOCUS       XP_061009797             356 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 184A isoform X2 [Dama dama].
ACCESSION   XP_061009797
VERSION     XP_061009797.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153814.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..356
                     /product="transmembrane protein 184A isoform X2"
                     /calculated_mol_wt=39086
     Region          45..319
                     /region_name="Solute_trans_a"
                     /note="Organic solute transporter Ostalpha; pfam03619"
                     /db_xref="CDD:460991"
     CDS             1..356
                     /gene="TMEM184A"
                     /coded_by="XM_061153814.1:209..1279"
                     /db_xref="GeneID:133063900"
ORIGIN      
        1 mtdapglpgh plvwtppagp agpqmertgn gsqgagplfl tsplargisg ifvwaalvlt
       61 ghqiylhlra ytvpneqryi irlllvvpvy afdswlslll lgaqqhyvyl dsvrdcyeaf
      121 viysflslcf qylggesaim aeirgkpirt scfhgtcclr gmtysigflr fckqatlqfc
      181 ivkpimalvt ivlqafgkyh dgdfnvrsgy lyvtlvynas vslalyalfl fysatsellr
      241 pfepvlkflt ikaviflsfw qglllailer cgvipevqvi dgntvgagtv aagyqnfiic
      301 iemlfasial ryaftcqvys ekkdhspgrr pqggpqpprg aspahgpgee trarms
//
LOCUS       XP_061009798             157 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor MafK [Dama dama].
ACCESSION   XP_061009798
VERSION     XP_061009798.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153815.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..157
                     /product="transcription factor MafK"
                     /calculated_mol_wt=17365
     Region          46..115
                     /region_name="bZIP_Maf_small"
                     /note="Basic leucine zipper (bZIP) domain of small
                     musculoaponeurotic fibrosarcoma (Maf) proteins: a
                     DNA-binding and dimerization domain; cd14717"
                     /db_xref="CDD:269865"
     Region          46..115
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269865"
     Site            order(56..58,60..62,64..65,68..69,71..72)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269865"
     Site            order(72,75..76,79..80,82..83,86..87,89..90,93,96..97,100,
                     103..104,107..108)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269865"
     CDS             1..157
                     /gene="MAFK"
                     /coded_by="XM_061153815.1:216..689"
                     /db_xref="GeneID:133063901"
ORIGIN      
        1 mttnpkanka lkvkkeagen aaalsddelv smsvrelnqh lrgltreevv rlkqrrrtlk
       61 nrgyaascri krvtqkeele rqrvelqqev eklarenssm rleldalrsk yealqtfart
      121 vargpvaptk vattsvitiv ksaemaasas vpfsaas
//
LOCUS       XP_061009799            2189 aa            linear   MAM 02-DEC-2023
DEFINITION  integrator complex subunit 1 [Dama dama].
ACCESSION   XP_061009799
VERSION     XP_061009799.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153816.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2189
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2189
                     /product="integrator complex subunit 1"
                     /calculated_mol_wt=242681
     Region          350..430
                     /region_name="DUF3677"
                     /note="Protein of unknown function (DUF3677); pfam12432"
                     /db_xref="CDD:463578"
     CDS             1..2189
                     /gene="INTS1"
                     /coded_by="XM_061153816.1:273..6842"
                     /db_xref="GeneID:133063902"
ORIGIN      
        1 mnrakptavr rpsaaakpsg hpppgdfial gskgqttesk tastllkpap sglpserkrd
       61 aaaalagasa lpgltkrpkl sstpplsalg rlaeaavaek raispsikep svvpievppt
      121 vlldeieaae legnddrleg vlcgavrqlk vtrakpdsvl ylslmylakm kpnifategv
      181 iealcsllrr dasinfkakg nslvsvlacn llmaayeede nwpeifvkvy iedslgeriw
      241 vdsphcrtfv dniqtafntk mppksvllqg eagrgggdls agssphpslt eeedsqtell
      301 iaeeklspeq egqlmpryee laesveeyvl dmlrdqlnrr qpidsvsrnl lrlltstcgy
      361 kevrlmtvqk lemwlqnpkl trpaqdllms vcmncsthga edmdvishli kirlkpkvll
      421 nhymlcirel lnahkdnlgt tikfvifnel snarnpnnmq ilytvlqhss elapkflamv
      481 fqdlltnkdd ylrasrallr eiikqtkhei nfqafclglm qerkepqyld mefkerfvvh
      541 vtdvlavsmm lgitaqvkea gvawdkgekk nlevlrsfqn qiaaiqrdav wwlhtvvpsi
      601 sklapkdyvh clhkvlfteq petyykwdnw ppesdrnffl rlcsevpile dtlmrilvig
      661 lsrelplgpa dameladhlv kraaavqadd vevlkvervq lidavlnlct yhhpeniqlp
      721 pgyqppnlai stlywkawpl llvvaafnpe niglaaweey ptlkmlmema mtnnysyppc
      781 tltdeesrae misrelqvsq rekqeilafe ghlaaastrq titessslll sqltslepqg
      841 pprrppphil dqvkglnqsl rlghllcrsr npdfllniiq rqassqsmpw ladlvqsseg
      901 sldvlpvqcl cefllhdaad epasggeeee geskeqkark rqrqqkqkql lgrlqdlllg
      961 pkadeqttce vldyflrrlg ssqvaarvla mkglslvlse gslrdgeeke ppleedsgda
     1021 dalqgyqwll rdlprlplfe svksttalal qqaihmetdp qtisaylvyl sqhtpveeqg
     1081 qhsdlaldva rliverstim shlfskrscs aesdavlaal lsifsryvqr mrkskegeev
     1141 yswsesqdqv flrwssgeta tmhilvvham villtlgppr agdsefqall diwfpekkpl
     1201 ptaflvdtse ealllpdwlk lrmirsevpr lvdaalqdle pqqlllfvqs fgipvssmsk
     1261 llqyldqava hdpqtleqni mdknymahlv evqhergasg gqtfhsllta slparrdsae
     1321 apkpksspeq ppgqgrtram tqvrvlgped dlaglllqif plspgprwqs ssarpaalal
     1381 qqalgrelar vrqgspevpg vavrllqala tllssphgga lalamhrghv lacplmrqlc
     1441 qyqrcapqdt gfsslflkvl vqalqwldgp sveagplqaq lrlfaaqcsa rrrisnvrsg
     1501 fvhlaealtf rgdleavsst vraivatlks geqcdvepel vskvlrglie arsphleell
     1561 aalfstasai pasgpvavvs slllpeqeep lapgkqdads csqeavrlgp csgllvdwle
     1621 mldpevvgsc pdlqqkllfs rgkgkghpgp qvpsfrpyll allthqssws tlhqcirill
     1681 grgreqrfdp sasldflwac ihvpriwqgr dqrtpqkrre elvlqvqpae lvglvelila
     1741 eaearsqdga agacgllqar lplllsccrg gdegvrkvta hltgcvqqwg dsvlgrcgrd
     1801 llvqlylqrp dlrvplpdvl lhsqgaagss vckldglihr fitlladtsd sraaesrvad
     1861 asmacrklav ahpllllrhl pmiaallhgr thlnfqefrq qnhltffmhv lgvlellqpq
     1921 vfqsehqgal wdcllsfvrl lrnyrkssrh lvpfaskfvr fthkyiscsp aaavaflqkh
     1981 lnvlhdlsld ssdlvmlksl laglslpsrd ggadrvldee gedessagsl plvsvyiftp
     2041 ltaaemapym krlsrgqtve dllevlsdvd emsrrrpeil gffstslqrl mssaeescrs
     2101 lafslalrsi qnnpgiaadf lptfmyclgs rdfevvqtal rnlpeytllc qehaavllhr
     2161 aflvgmygqm dtsaqiseal rilhleavm
//
LOCUS       XP_061009800             883 aa            linear   MAM 02-DEC-2023
DEFINITION  MICAL-like protein 2 isoform X1 [Dama dama].
ACCESSION   XP_061009800
VERSION     XP_061009800.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153817.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..883
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..883
                     /product="MICAL-like protein 2 isoform X1"
                     /calculated_mol_wt=93947
     Region          2..106
                     /region_name="CH_MICALL2"
                     /note="calponin homology (CH) domain found in MICAL-like
                     protein 2 and similar proteins; cd21253"
                     /db_xref="CDD:409102"
     Site            order(3,7,57,59..60,63..64,66,75..83,91,93..94,96..97,
                     100..101,104)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409102"
     Region          186..240
                     /region_name="LIM_Mical_like_1"
                     /note="This domain belongs to the LIM domain family which
                     are found on Mical (molecule interacting with CasL) like
                     proteins; cd09444"
                     /db_xref="CDD:188828"
     Site            order(186,189,207,210,213,216,236,239)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188828"
     Region          <282..711
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          716..845
                     /region_name="bMERB_dom"
                     /note="Bivalent Mical/EHBP Rab binding domain; pfam12130"
                     /db_xref="CDD:463467"
     CDS             1..883
                     /gene="MICALL2"
                     /coded_by="XM_061153817.1:65..2716"
                     /db_xref="GeneID:133063904"
ORIGIN      
        1 maatkaleqw crqqcegyrd vsitnmttsf rdglafcail hrhrpdllnf dalrkeniye
       61 nnklafrvae eqlgipalld aedmvalrvp drlsiltyvs qyynyfqrra paertagvkr
      121 ppsdtseeps gkkapsqpaq ptpvpargqp lspvslnrtv qrkdggsegp pqkagqavgg
      181 slsstcgvcg qhvhlmqrhl adgrlyhrgc frckqcsgtl hsgayratge pgvfvcsshh
      241 petasaspts pslasrwpga tsmdletpgg lrktreasgq rdtgpkaklp gwdpaagsas
      301 argstptatn ppaptssrvp agspaaprlm agpvggkast hvtsssltiw pspagspppt
      361 gtscapdpcp atpqgwatpr vtapqtklss rpaspapast pawtpssskt qqarerffqt
      421 pgatpgpgpa aadtpsgdsr reqalsflrk alpelgapgr sptaaapvpn shprfegpga
      481 spparasqpt spqtlspttr tgpptapgvg sssqssqeak kgpavssgav gagagsrlkl
      541 eappakspga spqdgpedqp agwrarlkpv ekspahrape pkeprvlgep wagdaagkas
      601 gssargirit vtsvqvdrtp gaagpgaslp atsasasplk klavpaslda sgdwlqleps
      661 rkegparsqk ekekgppqgk pgrppgpasv atppaksats pvrlhpdyvp peiqrqvqdi
      721 erqldalelq gvelekrlra aegddsedal mvdwfrlvhe kqlllrlese lmykardqrl
      781 eerqldlege lrrlmakpeg lkspqdrqre qdlldqyvdt vnnrsdiidf ldedrlreqe
      841 edevlqsmiq kldlqrsgee qrkkprfrls siwspksrsr tpe
//
LOCUS       XP_061009801             845 aa            linear   MAM 02-DEC-2023
DEFINITION  MICAL-like protein 2 isoform X2 [Dama dama].
ACCESSION   XP_061009801
VERSION     XP_061009801.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153818.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..845
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..845
                     /product="MICAL-like protein 2 isoform X2"
                     /calculated_mol_wt=89424
     Region          2..106
                     /region_name="CH_MICALL2"
                     /note="calponin homology (CH) domain found in MICAL-like
                     protein 2 and similar proteins; cd21253"
                     /db_xref="CDD:409102"
     Site            order(3,7,57,59..60,63..64,66,75..83,91,93..94,96..97,
                     100..101,104)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409102"
     Region          186..240
                     /region_name="LIM_Mical_like_1"
                     /note="This domain belongs to the LIM domain family which
                     are found on Mical (molecule interacting with CasL) like
                     proteins; cd09444"
                     /db_xref="CDD:188828"
     Site            order(186,189,207,210,213,216,236,239)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188828"
     Region          <282..711
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          716..834
                     /region_name="bMERB_dom"
                     /note="Bivalent Mical/EHBP Rab binding domain; pfam12130"
                     /db_xref="CDD:463467"
     CDS             1..845
                     /gene="MICALL2"
                     /coded_by="XM_061153818.1:65..2602"
                     /db_xref="GeneID:133063904"
ORIGIN      
        1 maatkaleqw crqqcegyrd vsitnmttsf rdglafcail hrhrpdllnf dalrkeniye
       61 nnklafrvae eqlgipalld aedmvalrvp drlsiltyvs qyynyfqrra paertagvkr
      121 ppsdtseeps gkkapsqpaq ptpvpargqp lspvslnrtv qrkdggsegp pqkagqavgg
      181 slsstcgvcg qhvhlmqrhl adgrlyhrgc frckqcsgtl hsgayratge pgvfvcsshh
      241 petasaspts pslasrwpga tsmdletpgg lrktreasgq rdtgpkaklp gwdpaagsas
      301 argstptatn ppaptssrvp agspaaprlm agpvggkast hvtsssltiw pspagspppt
      361 gtscapdpcp atpqgwatpr vtapqtklss rpaspapast pawtpssskt qqarerffqt
      421 pgatpgpgpa aadtpsgdsr reqalsflrk alpelgapgr sptaaapvpn shprfegpga
      481 spparasqpt spqtlspttr tgpptapgvg sssqssqeak kgpavssgav gagagsrlkl
      541 eappakspga spqdgpedqp agwrarlkpv ekspahrape pkeprvlgep wagdaagkas
      601 gssargirit vtsvqvdrtp gaagpgaslp atsasasplk klavpaslda sgdwlqleps
      661 rkegparsqk ekekgppqgk pgrppgpasv atppaksats pvrlhpdyvp peiqrqvqdi
      721 erqldalelq gvelekrlra aegddsedal mvdwfrlvhe kqlllrlese lmykardqrl
      781 eerqldlege lrrlmakpeg lkspqdrqre qdlldqyvdt vnnrsdiidf ldedrlrrrt
      841 rccra
//
LOCUS       XP_061009802             800 aa            linear   MAM 02-DEC-2023
DEFINITION  MICAL-like protein 2 isoform X3 [Dama dama].
ACCESSION   XP_061009802
VERSION     XP_061009802.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153819.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..800
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..800
                     /product="MICAL-like protein 2 isoform X3"
                     /calculated_mol_wt=84407
     Region          <1..23
                     /region_name="CH_SF"
                     /note="calponin homology (CH) domain superfamily; cl00030"
                     /db_xref="CDD:469584"
     Region          103..157
                     /region_name="LIM_Mical_like_1"
                     /note="This domain belongs to the LIM domain family which
                     are found on Mical (molecule interacting with CasL) like
                     proteins; cd09444"
                     /db_xref="CDD:188828"
     Site            order(103,106,124,127,130,133,153,156)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188828"
     Region          <199..628
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          633..762
                     /region_name="bMERB_dom"
                     /note="Bivalent Mical/EHBP Rab binding domain; pfam12130"
                     /db_xref="CDD:463467"
     CDS             1..800
                     /gene="MICALL2"
                     /coded_by="XM_061153819.1:459..2861"
                     /db_xref="GeneID:133063904"
ORIGIN      
        1 mvalrvpdrl siltyvsqyy nyfqrrapae rtagvkrpps dtseepsgkk apsqpaqptp
       61 vpargqplsp vslnrtvqrk dggsegppqk agqavggsls stcgvcgqhv hlmqrhladg
      121 rlyhrgcfrc kqcsgtlhsg ayratgepgv fvcsshhpet asasptspsl asrwpgatsm
      181 dletpgglrk treasgqrdt gpkaklpgwd paagsasarg stptatnppa ptssrvpags
      241 paaprlmagp vggkasthvt sssltiwpsp agsppptgts capdpcpatp qgwatprvta
      301 pqtklssrpa spapastpaw tpsssktqqa rerffqtpga tpgpgpaaad tpsgdsrreq
      361 alsflrkalp elgapgrspt aaapvpnshp rfegpgaspp arasqptspq tlspttrtgp
      421 ptapgvgsss qssqeakkgp avssgavgag agsrlkleap pakspgaspq dgpedqpagw
      481 rarlkpveks pahrapepke prvlgepwag daagkasgss argiritvts vqvdrtpgaa
      541 gpgaslpats asasplkkla vpasldasgd wlqlepsrke gparsqkeke kgppqgkpgr
      601 ppgpasvatp paksatspvr lhpdyvppei qrqvqdierq ldalelqgve lekrlraaeg
      661 ddsedalmvd wfrlvhekql llrleselmy kardqrleer qldlegelrr lmakpeglks
      721 pqdrqreqdl ldqyvdtvnn rsdiidflde drlreqeede vlqsmiqkld lqrsgeeqrk
      781 kprfrlssiw spksrsrtpe
//
LOCUS       XP_061009803             800 aa            linear   MAM 02-DEC-2023
DEFINITION  MICAL-like protein 2 isoform X3 [Dama dama].
ACCESSION   XP_061009803
VERSION     XP_061009803.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153820.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..800
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..800
                     /product="MICAL-like protein 2 isoform X3"
                     /calculated_mol_wt=84407
     Region          <1..23
                     /region_name="CH_SF"
                     /note="calponin homology (CH) domain superfamily; cl00030"
                     /db_xref="CDD:469584"
     Region          103..157
                     /region_name="LIM_Mical_like_1"
                     /note="This domain belongs to the LIM domain family which
                     are found on Mical (molecule interacting with CasL) like
                     proteins; cd09444"
                     /db_xref="CDD:188828"
     Site            order(103,106,124,127,130,133,153,156)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188828"
     Region          <199..628
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          633..762
                     /region_name="bMERB_dom"
                     /note="Bivalent Mical/EHBP Rab binding domain; pfam12130"
                     /db_xref="CDD:463467"
     CDS             1..800
                     /gene="MICALL2"
                     /coded_by="XM_061153820.1:2481..4883"
                     /db_xref="GeneID:133063904"
ORIGIN      
        1 mvalrvpdrl siltyvsqyy nyfqrrapae rtagvkrpps dtseepsgkk apsqpaqptp
       61 vpargqplsp vslnrtvqrk dggsegppqk agqavggsls stcgvcgqhv hlmqrhladg
      121 rlyhrgcfrc kqcsgtlhsg ayratgepgv fvcsshhpet asasptspsl asrwpgatsm
      181 dletpgglrk treasgqrdt gpkaklpgwd paagsasarg stptatnppa ptssrvpags
      241 paaprlmagp vggkasthvt sssltiwpsp agsppptgts capdpcpatp qgwatprvta
      301 pqtklssrpa spapastpaw tpsssktqqa rerffqtpga tpgpgpaaad tpsgdsrreq
      361 alsflrkalp elgapgrspt aaapvpnshp rfegpgaspp arasqptspq tlspttrtgp
      421 ptapgvgsss qssqeakkgp avssgavgag agsrlkleap pakspgaspq dgpedqpagw
      481 rarlkpveks pahrapepke prvlgepwag daagkasgss argiritvts vqvdrtpgaa
      541 gpgaslpats asasplkkla vpasldasgd wlqlepsrke gparsqkeke kgppqgkpgr
      601 ppgpasvatp paksatspvr lhpdyvppei qrqvqdierq ldalelqgve lekrlraaeg
      661 ddsedalmvd wfrlvhekql llrleselmy kardqrleer qldlegelrr lmakpeglks
      721 pqdrqreqdl ldqyvdtvnn rsdiidflde drlreqeede vlqsmiqkld lqrsgeeqrk
      781 kprfrlssiw spksrsrtpe
//
LOCUS       XP_061009804             173 aa            linear   MAM 02-DEC-2023
DEFINITION  AN1-type zinc finger protein 2A [Dama dama].
ACCESSION   XP_061009804
VERSION     XP_061009804.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153821.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..173
                     /product="AN1-type zinc finger protein 2A"
                     /calculated_mol_wt=19017
     Region          10..45
                     /region_name="zf-AN1"
                     /note="AN1-like Zinc finger; pfam01428"
                     /db_xref="CDD:460208"
     Region          100..134
                     /region_name="zf-AN1"
                     /note="AN1-like Zinc finger; pfam01428"
                     /db_xref="CDD:460208"
     CDS             1..173
                     /gene="ZFAND2A"
                     /coded_by="XM_061153821.1:398..919"
                     /db_xref="GeneID:133063906"
ORIGIN      
        1 mefpdlgkhc sektckqldf lplkcdackq dfckdhftya ahkcplaftk dvrvpvcplc
       61 hspvpvkkge ipdvvvgahm dgecrrppgq etakvftfrc sregcrrrem lrvaceecrg
      121 sfclqhrhpl dhgcargghp assagcsdsg psgasregpg swlarcfrfk vkp
//
LOCUS       XP_061009805             354 aa            linear   MAM 02-DEC-2023
DEFINITION  G-protein coupled estrogen receptor 1 [Dama dama].
ACCESSION   XP_061009805
VERSION     XP_061009805.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153822.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..354
                     /product="G-protein coupled estrogen receptor 1"
                     /calculated_mol_wt=39386
     Region          39..314
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          41..65
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          74..95
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          110..132
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          155..171
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          191..214
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          237..259
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          282..307
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..354
                     /gene="GPER1"
                     /coded_by="XM_061153822.1:684..1748"
                     /db_xref="GeneID:133063907"
ORIGIN      
        1 melppgtynd taaglelprt lanssvalse rqqyaiglfl sclytiflfp igfvgnllil
       61 vvnirfrekm tipdlyfinl aaadlilvad slievfnlde qyydiaalct fmslflqvnm
      121 yssvffltwm sfdrylalak avrcgpfrtk pcarlscgli wmasvsatla pftaahlqrs
      181 edacfcfadv revqwlevtl gfvlpfavig lcyalivrvl vsahrhrglr prrqkalrmi
      241 lavvlvffvc wlpenvfisv hllqrappga apcqrsprha hplaghvvnl aafsnsclnp
      301 liysflgetf rdklrlyleq ktglsalnrl chaalkavvp dsaeqaevkl sstv
//
LOCUS       XP_061009806             354 aa            linear   MAM 02-DEC-2023
DEFINITION  G-protein coupled estrogen receptor 1 [Dama dama].
ACCESSION   XP_061009806
VERSION     XP_061009806.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153823.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..354
                     /product="G-protein coupled estrogen receptor 1"
                     /calculated_mol_wt=39386
     Region          39..314
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          41..65
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          74..95
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          110..132
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          155..171
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          191..214
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          237..259
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          282..307
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..354
                     /gene="GPER1"
                     /coded_by="XM_061153823.1:1547..2611"
                     /db_xref="GeneID:133063907"
ORIGIN      
        1 melppgtynd taaglelprt lanssvalse rqqyaiglfl sclytiflfp igfvgnllil
       61 vvnirfrekm tipdlyfinl aaadlilvad slievfnlde qyydiaalct fmslflqvnm
      121 yssvffltwm sfdrylalak avrcgpfrtk pcarlscgli wmasvsatla pftaahlqrs
      181 edacfcfadv revqwlevtl gfvlpfavig lcyalivrvl vsahrhrglr prrqkalrmi
      241 lavvlvffvc wlpenvfisv hllqrappga apcqrsprha hplaghvvnl aafsnsclnp
      301 liysflgetf rdklrlyleq ktglsalnrl chaalkavvp dsaeqaevkl sstv
//
LOCUS       XP_061009807             331 aa            linear   MAM 02-DEC-2023
DEFINITION  probable G-protein coupled receptor 146 [Dama dama].
ACCESSION   XP_061009807
VERSION     XP_061009807.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153824.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..331
                     /product="probable G-protein coupled receptor 146"
                     /calculated_mol_wt=35179
     Region          57..305
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          61..82
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          101..123
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          144..160
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          183..206
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          230..252
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          273..298
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..331
                     /gene="GPR146"
                     /coded_by="XM_061153824.1:113..1108"
                     /db_xref="GeneID:133063908"
ORIGIN      
        1 mwscplngtg gddplpclhv qralsalsll yllggvplgl gynallllan lhdpggmtmp
       61 dvyfanmaaa glllcalapa hllgpgaagg atwdlgsevh vsllvlfnva alvtlystal
      121 lgldcyiera lprtymssvy ntrhvcgfvw ggallagfss llfyicshva arlvecsrmq
      181 daaaadaiml lvgylvpgla vlyalvllar vrkedtlldr daghpdpsah rllvatvcaq
      241 fglwtphylt llgrtvlaar gkpldghhvg tlllakdlsr flafassavv pllyrhldrn
      301 fpgklrrlmk klrrghqscs pdqagaqpvt a
//
LOCUS       XP_061009808             331 aa            linear   MAM 02-DEC-2023
DEFINITION  probable G-protein coupled receptor 146 [Dama dama].
ACCESSION   XP_061009808
VERSION     XP_061009808.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153825.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..331
                     /product="probable G-protein coupled receptor 146"
                     /calculated_mol_wt=35179
     Region          57..305
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          61..82
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          101..123
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          144..160
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          183..206
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          230..252
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          273..298
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..331
                     /gene="GPR146"
                     /coded_by="XM_061153825.1:54..1049"
                     /db_xref="GeneID:133063908"
ORIGIN      
        1 mwscplngtg gddplpclhv qralsalsll yllggvplgl gynallllan lhdpggmtmp
       61 dvyfanmaaa glllcalapa hllgpgaagg atwdlgsevh vsllvlfnva alvtlystal
      121 lgldcyiera lprtymssvy ntrhvcgfvw ggallagfss llfyicshva arlvecsrmq
      181 daaaadaiml lvgylvpgla vlyalvllar vrkedtlldr daghpdpsah rllvatvcaq
      241 fglwtphylt llgrtvlaar gkpldghhvg tlllakdlsr flafassavv pllyrhldrn
      301 fpgklrrlmk klrrghqscs pdqagaqpvt a
//
LOCUS       XP_061009809             278 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C7orf50 homolog isoform X1 [Dama dama].
ACCESSION   XP_061009809
VERSION     XP_061009809.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153826.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..278
                     /product="uncharacterized protein C7orf50 homolog isoform
                     X1"
                     /calculated_mol_wt=29935
     Region          174..230
                     /region_name="WKF"
                     /note="WKF domain; pfam10180"
                     /db_xref="CDD:462982"
     CDS             1..278
                     /gene="C10H7orf50"
                     /coded_by="XM_061153826.1:58..894"
                     /db_xref="GeneID:133063909"
ORIGIN      
        1 mrgdlavfls aacrgrgdqg agraggprsp lvcllrdgkt eekreqsgre keqkpegvsc
       61 tdapstrspa grqdgpcqgv ririrvpgga egpgeeaeeg aeergaeaaa gdghrcgskp
      121 geqalggras pgipvqegpr pavtaldrve prgqeatrrs slpdpdpgrf saswaqkhed
      181 wrfqktrqtw lllhmydrdq vpdehfptll ayleglrgra reltvqkaea lmreldqdya
      241 rgqswpflpa aahprgawpp pladgpshas srppaclr
//
LOCUS       XP_061009810             259 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C7orf50 homolog isoform X2 [Dama dama].
ACCESSION   XP_061009810
VERSION     XP_061009810.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153827.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..259
                     /product="uncharacterized protein C7orf50 homolog isoform
                     X2"
                     /calculated_mol_wt=27808
     Region          174..230
                     /region_name="WKF"
                     /note="WKF domain; pfam10180"
                     /db_xref="CDD:462982"
     CDS             1..259
                     /gene="C10H7orf50"
                     /coded_by="XM_061153827.1:54..833"
                     /db_xref="GeneID:133063909"
ORIGIN      
        1 mrgdlavfls aacrgrgdqg agraggprsp lvcllrdgkt eekreqsgre keqkpegvsc
       61 tdapstrspa grqdgpcqgv ririrvpgga egpgeeaeeg aeergaeaaa gdghrcgskp
      121 geqalggras pgipvqegpr pavtaldrve prgqeatrrs slpdpdpgrf saswaqkhed
      181 wrfqktrqtw lllhmydrdq vpdehfptll ayleglrgra reltvqkaea lmreldqvga
      241 calppggtqr arqvlqlls
//
LOCUS       XP_061009811             245 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C7orf50 homolog isoform X3 [Dama dama].
ACCESSION   XP_061009811
VERSION     XP_061009811.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153828.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..245
                     /product="uncharacterized protein C7orf50 homolog isoform
                     X3"
                     /calculated_mol_wt=26262
     Region          174..230
                     /region_name="WKF"
                     /note="WKF domain; pfam10180"
                     /db_xref="CDD:462982"
     CDS             1..245
                     /gene="C10H7orf50"
                     /coded_by="XM_061153828.1:58..795"
                     /db_xref="GeneID:133063909"
ORIGIN      
        1 mrgdlavfls aacrgrgdqg agraggprsp lvcllrdgkt eekreqsgre keqkpegvsc
       61 tdapstrspa grqdgpcqgv ririrvpgga egpgeeaeeg aeergaeaaa gdghrcgskp
      121 geqalggras pgipvqegpr pavtaldrve prgqeatrrs slpdpdpgrf saswaqkhed
      181 wrfqktrqtw lllhmydrdq vpdehfptll ayleglrgra reltvqkaea lmreldqdgg
      241 pagcn
//
LOCUS       XP_061009812             236 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C7orf50 homolog isoform X4 [Dama dama].
ACCESSION   XP_061009812
VERSION     XP_061009812.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153829.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..236
                     /product="uncharacterized protein C7orf50 homolog isoform
                     X4"
                     /calculated_mol_wt=24621
     CDS             1..236
                     /gene="C10H7orf50"
                     /coded_by="XM_061153829.1:56..766"
                     /db_xref="GeneID:133063909"
ORIGIN      
        1 mrgdlavfls aacrgrgdqg agraggprsp lvcllrdgkt eekreqsgre keqkpegvsc
       61 tdapstrspa grqdgpcqgv ririrvpgga egpgeeaeeg aeergaeaaa gdghrcgskp
      121 geqalggras pgipvqlgpe arglevpede adlaatahvp dehfptllay leglrgrare
      181 ltvqkaealm reldqdyarg qswpflpaaa hprgawpppl adgpshassr ppaclr
//
LOCUS       XP_061009813             229 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C7orf50 homolog isoform X5 [Dama dama].
ACCESSION   XP_061009813
VERSION     XP_061009813.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153830.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..229
                     /product="uncharacterized protein C7orf50 homolog isoform
                     X5"
                     /calculated_mol_wt=25218
     Region          125..181
                     /region_name="WKF"
                     /note="WKF domain; pfam10180"
                     /db_xref="CDD:462982"
     CDS             1..229
                     /gene="C10H7orf50"
                     /coded_by="XM_061153830.1:275..964"
                     /db_xref="GeneID:133063909"
ORIGIN      
        1 mwgfalseav seweiwwpgp tstergkrsw vririrvpgg aegpgeeaee gaeergaeaa
       61 agdghrcgsk pgeqalggra spgipvqegp rpavtaldrv eprgqeatrr sslpdpdpgr
      121 fsaswaqkhe dwrfqktrqt wlllhmydrd qvpdehfptl layleglrgr areltvqkae
      181 almreldqdy argqswpflp aaahprgawp ppladgpsha ssrppaclr
//
LOCUS       XP_061009814             225 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C7orf50 homolog isoform X6 [Dama dama].
ACCESSION   XP_061009814
VERSION     XP_061009814.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153831.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..225
                     /product="uncharacterized protein C7orf50 homolog isoform
                     X6"
                     /calculated_mol_wt=24083
     Region          121..177
                     /region_name="WKF"
                     /note="WKF domain; pfam10180"
                     /db_xref="CDD:462982"
     CDS             1..225
                     /gene="C10H7orf50"
                     /coded_by="XM_061153831.1:38..715"
                     /db_xref="GeneID:133063909"
ORIGIN      
        1 mrsarglrrp ggaelpatpg gggpggvrir irvpggaegp geeaeegaee rgaeaaagdg
       61 hrcgskpgeq alggraspgi pvqegprpav taldrveprg qeatrrsslp dpdpgrfsas
      121 waqkhedwrf qktrqtwlll hmydrdqvpd ehfptllayl eglrgrarel tvqkaealmr
      181 eldqdyargq swpflpaaah prgawpppla dgpshassrp paclr
//
LOCUS       XP_061009815             217 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C7orf50 homolog isoform X7 [Dama dama].
ACCESSION   XP_061009815
VERSION     XP_061009815.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153832.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..217
                     /product="uncharacterized protein C7orf50 homolog isoform
                     X7"
                     /calculated_mol_wt=22494
     CDS             1..217
                     /gene="C10H7orf50"
                     /coded_by="XM_061153832.1:55..708"
                     /db_xref="GeneID:133063909"
ORIGIN      
        1 mrgdlavfls aacrgrgdqg agraggprsp lvcllrdgkt eekreqsgre keqkpegvsc
       61 tdapstrspa grqdgpcqgv ririrvpgga egpgeeaeeg aeergaeaaa gdghrcgskp
      121 geqalggras pgipvqlgpe arglevpede adlaatahvp dehfptllay leglrgrare
      181 ltvqkaealm reldqvgaca lppggtqrar qvlqlls
//
LOCUS       XP_061009817             217 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C7orf50 homolog isoform X8 [Dama dama].
ACCESSION   XP_061009817
VERSION     XP_061009817.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153834.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..217
                     /product="uncharacterized protein C7orf50 homolog isoform
                     X8"
                     /calculated_mol_wt=22934
     Region          174..>195
                     /region_name="WKF"
                     /note="WKF domain; pfam10180"
                     /db_xref="CDD:462982"
     CDS             1..217
                     /gene="C10H7orf50"
                     /coded_by="XM_061153834.1:58..711"
                     /db_xref="GeneID:133063909"
ORIGIN      
        1 mrgdlavfls aacrgrgdqg agraggprsp lvcllrdgkt eekreqsgre keqkpegvsc
       61 tdapstrspa grqdgpcqgv ririrvpgga egpgeeaeeg aeergaeaaa gdghrcgskp
      121 geqalggras pgipvqegpr pavtaldrve prgqeatrrs slpdpdpgrf saswaqkhed
      181 wrfqktrqtw lllhmslmst sppcwpiwrg sgaapvs
//
LOCUS       XP_061009818             217 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C7orf50 homolog isoform X8 [Dama dama].
ACCESSION   XP_061009818
VERSION     XP_061009818.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153835.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..217
                     /product="uncharacterized protein C7orf50 homolog isoform
                     X8"
                     /calculated_mol_wt=22934
     Region          174..>195
                     /region_name="WKF"
                     /note="WKF domain; pfam10180"
                     /db_xref="CDD:462982"
     CDS             1..217
                     /gene="C10H7orf50"
                     /coded_by="XM_061153835.1:58..711"
                     /db_xref="GeneID:133063909"
ORIGIN      
        1 mrgdlavfls aacrgrgdqg agraggprsp lvcllrdgkt eekreqsgre keqkpegvsc
       61 tdapstrspa grqdgpcqgv ririrvpgga egpgeeaeeg aeergaeaaa gdghrcgskp
      121 geqalggras pgipvqegpr pavtaldrve prgqeatrrs slpdpdpgrf saswaqkhed
      181 wrfqktrqtw lllhmslmst sppcwpiwrg sgaapvs
//
LOCUS       XP_061009819             186 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C7orf50 homolog isoform X9 [Dama dama].
ACCESSION   XP_061009819
VERSION     XP_061009819.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153836.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..186
                     /product="uncharacterized protein C7orf50 homolog isoform
                     X9"
                     /calculated_mol_wt=20641
     Region          96..157
                     /region_name="WKF"
                     /note="WKF domain; pfam10180"
                     /db_xref="CDD:462982"
     CDS             1..186
                     /gene="C10H7orf50"
                     /coded_by="XM_061153836.1:115..675"
                     /db_xref="GeneID:133063909"
ORIGIN      
        1 makqkrkesr vaekksknlk vsaaqtppap aappgartap akgsasasvs qeeqrvlerk
       61 lkkerkkear rrlretgiaa apspaskrsg aalaleylcs waqkhedwrf qktrqtwlll
      121 hmydrdqvpd ehfptllayl eglrgrarel tvqkaealmr eldqvgacal ppggtqrarq
      181 vlqlls
//
LOCUS       XP_061009820              89 aa            linear   MAM 02-DEC-2023
DEFINITION  cytochrome c oxidase assembly protein COX19 [Dama dama].
ACCESSION   XP_061009820
VERSION     XP_061009820.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153837.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..89
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..89
                     /product="cytochrome c oxidase assembly protein COX19"
                     /calculated_mol_wt=10218
     Region          30..64
                     /region_name="CHCH"
                     /note="CHCH domain; pfam06747"
                     /db_xref="CDD:429096"
     CDS             1..89
                     /gene="LOC133063912"
                     /coded_by="XM_061153837.1:910..1179"
                     /db_xref="GeneID:133063912"
ORIGIN      
        1 mstamnfgsk sfqprppdkg sfpldhfgec ksfkekfmkc lrdnnfentl crneskeyle
       61 crmerqlmaq epleklgfgd lidgksdkn
//
LOCUS       XP_061009821             491 aa            linear   MAM 02-DEC-2023
DEFINITION  cytochrome P450 2W1 [Dama dama].
ACCESSION   XP_061009821
VERSION     XP_061009821.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153838.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..491
                     /product="cytochrome P450 2W1"
                     /calculated_mol_wt=53795
     Region          61..482
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(120,124,131,177,290..291,294..295,298..299,302,353,
                     362,364,387,423..425,429..433,436..437)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410651"
     Site            order(203..204,290,293..294,298,360..363)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410651"
     CDS             1..491
                     /gene="LOC133063913"
                     /coded_by="XM_061153838.1:1447..2922"
                     /db_xref="GeneID:133063913"
ORIGIN      
        1 mallllallv lltlwgllra rahtpaprwp pgprplplig nlhllraaqq dqalmqlaeq
       61 ygpvftvhlg hqktvvltgy eavkkalvga gqelagrppi aifqlinggg gvffssgprw
      121 raarqltvra lhglgvgrap vadkvlqelr clmaqldsyg gqpfplallr wapsnitfal
      181 lfgqrfdyrd pvfvsllglv devmvllgkp svqlfnlypr lgallqlhrp vlrkieevra
      241 ilrallearr rrtpprgper syldaliqqg qgkdpeglft eanvvacvld mvmagtetta
      301 atlqwaallm gkhprvqslv qqeldrvlgp aqlprpedvr alpytnavlh evqrfitllp
      361 haprctvadt qlgpyllpkg tpvlallnsv lldetqwetp rqfnpghfld angrfvkrpa
      421 flpfsagrrv cvgeslarse lfllfagllq ryrllpppgl saaaldttpa paftarpsaq
      481 llcavprlqg r
//
LOCUS       XP_061009822             374 aa            linear   MAM 02-DEC-2023
DEFINITION  arf-GAP with dual PH domain-containing protein 1 isoform X1 [Dama
            dama].
ACCESSION   XP_061009822
VERSION     XP_061009822.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153839.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..374
                     /product="arf-GAP with dual PH domain-containing protein 1
                     isoform X1"
                     /calculated_mol_wt=43252
     Region          2..113
                     /region_name="ArfGap_ADAP1"
                     /note="ADAP1 GTPase activating protein for Arf, with dual
                     PH domains; cd08843"
                     /db_xref="CDD:350069"
     Site            order(21,24,41,44,49)
                     /site_type="other"
                     /note="arginine finger"
                     /db_xref="CDD:350069"
     Site            order(21,24,41,44)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:350069"
     Site            order(50,52..53,72,84..85)
                     /site_type="other"
                     /note="KIF13B binding site [polypeptide binding]"
                     /db_xref="CDD:350069"
     Region          130..238
                     /region_name="PH1_ADAP"
                     /note="ArfGAP with dual PH domains Pleckstrin homology
                     (PH) domain, repeat 1; cd13252"
                     /db_xref="CDD:270072"
     Site            order(137,143,145..147,186..193,211..214,216..217)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:270072"
     Site            order(137,143,145..147,186..193,211,213)
                     /site_type="other"
                     /note="KIF12B binding site [polypeptide binding]"
                     /db_xref="CDD:270072"
     Site            order(138,141..143,149,162,164,172,206)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:270072"
     Region          252..357
                     /region_name="PH2_ADAP"
                     /note="ArfGAP with dual PH domains Pleckstrin homology
                     (PH) domain, repeat 2; cd01251"
                     /db_xref="CDD:241282"
     Site            order(261,269,271,273,284,294,332)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:241282"
     CDS             1..374
                     /gene="ADAP1"
                     /coded_by="XM_061153839.1:50..1174"
                     /db_xref="GeneID:133063914"
ORIGIN      
        1 makerrkavl ellqrpgnar cadcgapdpd wasytlgvfi clscsgihrn iphvskvksv
       61 rldswedvqv efmasrgnai aratfeskvp pfyyrpsasd cqllreqwir akyerqefth
      121 perqepysag yregflwkrg rdngqflsrk fvlteregal kyfnrsdake pkavmkiehl
      181 natfqpakig hphglqvtyl kdnstrnifv yhedgkemvd wfnalraarf hylqvafpga
      241 sdadlvpkls rnylqegyme ktgpkqtegf rkrwftmddr rlmyfkdpld afargevfig
      301 sresgytvld glppstqghh wphgitivtp errfllacet eseqrawmea lrkvvdrpml
      361 pqeyaveahf khkp
//
LOCUS       XP_061009823             373 aa            linear   MAM 02-DEC-2023
DEFINITION  arf-GAP with dual PH domain-containing protein 1 isoform X2 [Dama
            dama].
ACCESSION   XP_061009823
VERSION     XP_061009823.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153840.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..373
                     /product="arf-GAP with dual PH domain-containing protein 1
                     isoform X2"
                     /calculated_mol_wt=43124
     Region          2..113
                     /region_name="ArfGap_ADAP1"
                     /note="ADAP1 GTPase activating protein for Arf, with dual
                     PH domains; cd08843"
                     /db_xref="CDD:350069"
     Site            order(21,24,41,44,49)
                     /site_type="other"
                     /note="arginine finger"
                     /db_xref="CDD:350069"
     Site            order(21,24,41,44)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:350069"
     Site            order(50,52..53,72,84..85)
                     /site_type="other"
                     /note="KIF13B binding site [polypeptide binding]"
                     /db_xref="CDD:350069"
     Region          130..238
                     /region_name="PH1_ADAP"
                     /note="ArfGAP with dual PH domains Pleckstrin homology
                     (PH) domain, repeat 1; cd13252"
                     /db_xref="CDD:270072"
     Site            order(137,143,145..147,186..193,211..214,216..217)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:270072"
     Site            order(137,143,145..147,186..193,211,213)
                     /site_type="other"
                     /note="KIF12B binding site [polypeptide binding]"
                     /db_xref="CDD:270072"
     Site            order(138,141..143,149,162,164,172,206)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:270072"
     Region          252..356
                     /region_name="PH2_ADAP"
                     /note="ArfGAP with dual PH domains Pleckstrin homology
                     (PH) domain, repeat 2; cd01251"
                     /db_xref="CDD:241282"
     Site            order(261,268,270,272,283,293,331)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:241282"
     CDS             1..373
                     /gene="ADAP1"
                     /coded_by="XM_061153840.1:50..1171"
                     /db_xref="GeneID:133063914"
ORIGIN      
        1 makerrkavl ellqrpgnar cadcgapdpd wasytlgvfi clscsgihrn iphvskvksv
       61 rldswedvqv efmasrgnai aratfeskvp pfyyrpsasd cqllreqwir akyerqefth
      121 perqepysag yregflwkrg rdngqflsrk fvlteregal kyfnrsdake pkavmkiehl
      181 natfqpakig hphglqvtyl kdnstrnifv yhedgkemvd wfnalraarf hylqvafpga
      241 sdadlvpkls rnylqegyme ktgpktegfr krwftmddrr lmyfkdplda fargevfigs
      301 resgytvldg lppstqghhw phgitivtpe rrfllacete seqrawmeal rkvvdrpmlp
      361 qeyaveahfk hkp
//
LOCUS       XP_061009824             302 aa            linear   MAM 02-DEC-2023
DEFINITION  arf-GAP with dual PH domain-containing protein 1 isoform X3 [Dama
            dama].
ACCESSION   XP_061009824
VERSION     XP_061009824.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153841.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..302
                     /product="arf-GAP with dual PH domain-containing protein 1
                     isoform X3"
                     /calculated_mol_wt=35199
     Region          <1..41
                     /region_name="ArfGap"
                     /note="GTPase-activating protein (GAP) for the ADP
                     ribosylation factors (ARFs); cl28907"
                     /db_xref="CDD:355783"
     Region          58..166
                     /region_name="PH1_ADAP"
                     /note="ArfGAP with dual PH domains Pleckstrin homology
                     (PH) domain, repeat 1; cd13252"
                     /db_xref="CDD:270072"
     Site            order(65,71,73..75,114..121,139..142,144..145)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:270072"
     Site            order(65,71,73..75,114..121,139,141)
                     /site_type="other"
                     /note="KIF12B binding site [polypeptide binding]"
                     /db_xref="CDD:270072"
     Site            order(66,69..71,77,90,92,100,134)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:270072"
     Region          180..285
                     /region_name="PH2_ADAP"
                     /note="ArfGAP with dual PH domains Pleckstrin homology
                     (PH) domain, repeat 2; cd01251"
                     /db_xref="CDD:241282"
     Site            order(189,197,199,201,212,222,260)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:241282"
     CDS             1..302
                     /gene="ADAP1"
                     /coded_by="XM_061153841.1:155..1063"
                     /db_xref="GeneID:133063914"
ORIGIN      
        1 masrgnaiar atfeskvppf yyrpsasdcq llreqwirak yerqefthpe rqepysagyr
       61 egflwkrgrd ngqflsrkfv lteregalky fnrsdakepk avmkiehlna tfqpakighp
      121 hglqvtylkd nstrnifvyh edgkemvdwf nalraarfhy lqvafpgasd adlvpklsrn
      181 ylqegymekt gpkqtegfrk rwftmddrrl myfkdpldaf argevfigsr esgytvldgl
      241 ppstqghhwp hgitivtper rfllacetes eqrawmealr kvvdrpmlpq eyaveahfkh
      301 kp
//
LOCUS       XP_061009826             326 aa            linear   MAM 02-DEC-2023
DEFINITION  Golgi to ER traffic protein 4 homolog isoform X1 [Dama dama].
ACCESSION   XP_061009826
VERSION     XP_061009826.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153843.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..326
                     /product="Golgi to ER traffic protein 4 homolog isoform
                     X1"
                     /calculated_mol_wt=36169
     Region          56..292
                     /region_name="GET4"
                     /note="Golgi to ER traffic protein 4; pfam04190"
                     /db_xref="CDD:461217"
     CDS             1..326
                     /gene="GET4"
                     /coded_by="XM_061153843.1:25..1005"
                     /db_xref="GeneID:133063915"
ORIGIN      
        1 maaaaamaeq esarngarnr ggvqrvegkl rasvekgdyy eahqmyrtlf frymaqskhs
       61 earelmcsga llffshgqqn saadlsmlvl eslekaevev adelleslak lfslmdpnsp
      121 ervafvsral kwssggsgkl ghprlhqlla ltlwkeqnyc esryhflhss dgegcanmlv
      181 eystargfrs evdmfvaqav lqflclknks sasvvfttyt qkhpsiesgp pfvqpllnfi
      241 wflllavegg kltvftvlce qyqpalrrdp myneyldrig qlffgvppkq tssyggllgn
      301 llsslmgsse qegedsqdds spield
//
LOCUS       XP_061009827             273 aa            linear   MAM 02-DEC-2023
DEFINITION  Golgi to ER traffic protein 4 homolog isoform X2 [Dama dama].
ACCESSION   XP_061009827
VERSION     XP_061009827.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153844.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..273
                     /product="Golgi to ER traffic protein 4 homolog isoform
                     X2"
                     /calculated_mol_wt=30173
     Region          3..239
                     /region_name="GET4"
                     /note="Golgi to ER traffic protein 4; pfam04190"
                     /db_xref="CDD:461217"
     CDS             1..273
                     /gene="GET4"
                     /coded_by="XM_061153844.1:359..1180"
                     /db_xref="GeneID:133063915"
ORIGIN      
        1 maqskhsear elmcsgallf fshgqqnsaa dlsmlvlesl ekaevevade lleslaklfs
       61 lmdpnsperv afvsralkws sggsgklghp rlhqllaltl wkeqnycesr yhflhssdge
      121 gcanmlveys targfrsevd mfvaqavlqf lclknkssas vvfttytqkh psiesgppfv
      181 qpllnfiwfl llaveggklt vftvlceqyq palrrdpmyn eyldrigqlf fgvppkqtss
      241 yggllgnlls slmgsseqeg edsqddsspi eld
//
LOCUS       XP_061009828             896 aa            linear   MAM 02-DEC-2023
DEFINITION  SUN domain-containing protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061009828
VERSION     XP_061009828.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153845.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..896
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..896
                     /product="SUN domain-containing protein 1 isoform X1"
                     /calculated_mol_wt=98138
     Region          62..411
                     /region_name="MRP"
                     /note="Mitochondrial RNA binding protein MRP; pfam09387"
                     /db_xref="CDD:430576"
     Region          <501..>601
                     /region_name="DR0291"
                     /note="Predicted nucleic acid-binding protein DR0291,
                     contains C4-type Zn-ribbon domain [General function
                     prediction only]; COG1579"
                     /db_xref="CDD:441187"
     Region          532..581
                     /region_name="SUN1_cc1"
                     /note="coiled-coil domain 1 of SUN domain-containing
                     protein 1 and similar proteins; cd21439"
                     /db_xref="CDD:410605"
     Site            order(534,537..538,541..542,544..545,548..549,551..552,
                     555..556,558..559,562,565..566,569,572..573,576..577,
                     579..581)
                     /site_type="other"
                     /note="putative trimer interface [polypeptide binding]"
                     /db_xref="CDD:410605"
     Region          659..717
                     /region_name="HTH_SUN2"
                     /note="SUN2 helix-turn-helix domain; pfam18580"
                     /db_xref="CDD:436594"
     Region          760..894
                     /region_name="Sad1_UNC"
                     /note="Sad1 / UNC-like C-terminal; pfam07738"
                     /db_xref="CDD:400199"
     CDS             1..896
                     /gene="SUN1"
                     /coded_by="XM_061153845.1:152..2842"
                     /db_xref="GeneID:133063916"
ORIGIN      
        1 mdfsrlhtyt ppqcvpentg ytyalsssys sdaldfeteh kldpvfdspr msrrslrlvt
       61 taraagdgpa gdstarlakq rssthksafs vhpssrkvls savshggsgt vqaaacprpp
      121 vldeslireq tkvdhfwgld ddgdlkggnk aaiqgngevt agateaagsn gytcsdcsll
      181 serrsmltac saargpasrv ysrdrsqkrr aarrgdgtws laahtsasca sflvqlfqvv
      241 lmklnyesek yklksceskd resksyeses heskahsrhc grmdarapla edghlranga
      301 slcddckgrk rlethvtths qlsrpgglag tlglalsrag hlsgqalrra gaagwrgsrm
      361 llsalclaaa apgkaasgvf wwlgigwyql vtliswlnvf lltrclrnic kflillipll
      421 lllgagvslw gqgdvfsllp vlnwtqshrv qrvddprttl tpaashpnqp lqvgdeafhw
      481 rrmseverqv amlsgqchsh deklgqlaal lqklqarvdr adgsseggsp ptnyvtlhqe
      541 helrissled vlgelterse aiqkeleqar lrtvsgagee qrllalvgrl eqelghlkad
      601 lsswqhgqas cekveaihek vdvqirealr lmfsgdehda svdwllrkls akfvskgdvq
      661 vllrdlelqi lrnithhisv tremptsetv vsavsgagis giteaqarvi vnnalklysq
      721 dktgmvdfal esgggsvlst rcsetyetkt alislfgvpl wyfsqsprva iqpdiypgnc
      781 wafkgsqgyl vvrlsmticp taftlehipk alsptgsits apkdfavfgl eneyqeegql
      841 lgrftydqeg eslqmfvapk kperafqive lrifsnwghp eytclyrfrv hgepik
//
LOCUS       XP_061009829             895 aa            linear   MAM 02-DEC-2023
DEFINITION  SUN domain-containing protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061009829
VERSION     XP_061009829.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153846.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..895
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..895
                     /product="SUN domain-containing protein 1 isoform X2"
                     /calculated_mol_wt=98007
     Region          62..412
                     /region_name="MRP"
                     /note="Mitochondrial RNA binding protein MRP; pfam09387"
                     /db_xref="CDD:430576"
     Region          <500..>600
                     /region_name="DR0291"
                     /note="Predicted nucleic acid-binding protein DR0291,
                     contains C4-type Zn-ribbon domain [General function
                     prediction only]; COG1579"
                     /db_xref="CDD:441187"
     Region          531..580
                     /region_name="SUN1_cc1"
                     /note="coiled-coil domain 1 of SUN domain-containing
                     protein 1 and similar proteins; cd21439"
                     /db_xref="CDD:410605"
     Site            order(533,536..537,540..541,543..544,547..548,550..551,
                     554..555,557..558,561,564..565,568,571..572,575..576,
                     578..580)
                     /site_type="other"
                     /note="putative trimer interface [polypeptide binding]"
                     /db_xref="CDD:410605"
     Region          658..716
                     /region_name="HTH_SUN2"
                     /note="SUN2 helix-turn-helix domain; pfam18580"
                     /db_xref="CDD:436594"
     Region          759..893
                     /region_name="Sad1_UNC"
                     /note="Sad1 / UNC-like C-terminal; pfam07738"
                     /db_xref="CDD:400199"
     CDS             1..895
                     /gene="SUN1"
                     /coded_by="XM_061153846.1:152..2839"
                     /db_xref="GeneID:133063916"
ORIGIN      
        1 mdfsrlhtyt ppqcvpentg ytyalsssys sdaldfeteh kldpvfdspr msrrslrlvt
       61 taraagdgpa gdstarlakq rssthksafs vhpssrkvls savshggsgt vqaaacprpp
      121 vldeslireq tkvdhfwgld ddgdlkggnk aaiqgngevt agateaagsn gytcsdcsll
      181 serrsmltac saargpasrv ysrdrsqkpg raarrgdgtw slaahtsasc asflvqlfqv
      241 vlmklnyese kyklkscesk dresksyese sheskahsrh cgrmdarapl aedghlrang
      301 aslcddckgr krlethvtth sqlsrpggla gtlglalsra ghlsgqalrr agaagwrgsr
      361 mllsalclaa aapgkaasgv fwwlgigwyq lvtliswlnv flltrclrni ckflillipl
      421 llllgvslwg qgdvfsllpv lnwtqshrvq rvddprttlt paashpnqpl qvgdeafhwr
      481 rmseverqva mlsgqchshd eklgqlaall qklqarvdra dgsseggspp tnyvtlhqeh
      541 elrissledv lgeltersea iqkeleqarl rtvsgageeq rllalvgrle qelghlkadl
      601 sswqhgqasc ekveaihekv dvqirealrl mfsgdehdas vdwllrklsa kfvskgdvqv
      661 llrdlelqil rnithhisvt remptsetvv savsgagisg iteaqarviv nnalklysqd
      721 ktgmvdfale sgggsvlstr csetyetkta lislfgvplw yfsqsprvai qpdiypgncw
      781 afkgsqgylv vrlsmticpt aftlehipka lsptgsitsa pkdfavfgle neyqeegqll
      841 grftydqege slqmfvapkk perafqivel rifsnwghpe ytclyrfrvh gepik
//
LOCUS       XP_061009830             847 aa            linear   MAM 02-DEC-2023
DEFINITION  SUN domain-containing protein 1 isoform X3 [Dama dama].
ACCESSION   XP_061009830
VERSION     XP_061009830.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153847.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..847
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..847
                     /product="SUN domain-containing protein 1 isoform X3"
                     /calculated_mol_wt=92436
     Region          12..362
                     /region_name="MRP"
                     /note="Mitochondrial RNA binding protein MRP; pfam09387"
                     /db_xref="CDD:430576"
     Region          <452..>552
                     /region_name="DR0291"
                     /note="Predicted nucleic acid-binding protein DR0291,
                     contains C4-type Zn-ribbon domain [General function
                     prediction only]; COG1579"
                     /db_xref="CDD:441187"
     Region          483..532
                     /region_name="SUN1_cc1"
                     /note="coiled-coil domain 1 of SUN domain-containing
                     protein 1 and similar proteins; cd21439"
                     /db_xref="CDD:410605"
     Site            order(485,488..489,492..493,495..496,499..500,502..503,
                     506..507,509..510,513,516..517,520,523..524,527..528,
                     530..532)
                     /site_type="other"
                     /note="putative trimer interface [polypeptide binding]"
                     /db_xref="CDD:410605"
     Region          610..668
                     /region_name="HTH_SUN2"
                     /note="SUN2 helix-turn-helix domain; pfam18580"
                     /db_xref="CDD:436594"
     Region          711..845
                     /region_name="Sad1_UNC"
                     /note="Sad1 / UNC-like C-terminal; pfam07738"
                     /db_xref="CDD:400199"
     CDS             1..847
                     /gene="SUN1"
                     /coded_by="XM_061153847.1:213..2756"
                     /db_xref="GeneID:133063916"
ORIGIN      
        1 msrrslrlvt taraagdgpa gdstarlakq rssthksafs vhpssrkvls savshggsgt
       61 vqaaacprpp vldeslireq tkvdhfwgld ddgdlkggnk aaiqgngevt agateaagsn
      121 gytcsdcsll serrsmltac saargpasrv ysrdrsqkpg raarrgdgtw slaahtsasc
      181 asflvqlfqv vlmklnyese kyklkscesk dresksyese sheskahsrh cgrmdarapl
      241 aedghlrang aslcddckgr krlethvtth sqlsrpggla gtlglalsra ghlsgqalrr
      301 agaagwrgsr mllsalclaa aapgkaasgv fwwlgigwyq lvtliswlnv flltrclrni
      361 ckflillipl llllgagvsl wgqgdvfsll pvlnwtqshr vqrvddprtt ltpaashpnq
      421 plqvgdeafh wrrmseverq vamlsgqchs hdeklgqlaa llqklqarvd radgsseggs
      481 pptnyvtlhq ehelrissle dvlgelters eaiqkeleqa rlrtvsgage eqrllalvgr
      541 leqelghlka dlsswqhgqa scekveaihe kvdvqireal rlmfsgdehd asvdwllrkl
      601 sakfvskgdv qvllrdlelq ilrnithhis vtremptset vvsavsgagi sgiteaqarv
      661 ivnnalklys qdktgmvdfa lesgggsvls trcsetyetk talislfgvp lwyfsqsprv
      721 aiqpdiypgn cwafkgsqgy lvvrlsmtic ptaftlehip kalsptgsit sapkdfavfg
      781 leneyqeegq llgrftydqe geslqmfvap kkperafqiv elrifsnwgh peytclyrfr
      841 vhgepik
//
LOCUS       XP_061009831             830 aa            linear   MAM 02-DEC-2023
DEFINITION  SUN domain-containing protein 1 isoform X4 [Dama dama].
ACCESSION   XP_061009831
VERSION     XP_061009831.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153848.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..830
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..830
                     /product="SUN domain-containing protein 1 isoform X4"
                     /calculated_mol_wt=90635
     Region          62..345
                     /region_name="MRP"
                     /note="Mitochondrial RNA binding protein MRP; pfam09387"
                     /db_xref="CDD:430576"
     Region          <435..>535
                     /region_name="DR0291"
                     /note="Predicted nucleic acid-binding protein DR0291,
                     contains C4-type Zn-ribbon domain [General function
                     prediction only]; COG1579"
                     /db_xref="CDD:441187"
     Region          466..515
                     /region_name="SUN1_cc1"
                     /note="coiled-coil domain 1 of SUN domain-containing
                     protein 1 and similar proteins; cd21439"
                     /db_xref="CDD:410605"
     Site            order(468,471..472,475..476,478..479,482..483,485..486,
                     489..490,492..493,496,499..500,503,506..507,510..511,
                     513..515)
                     /site_type="other"
                     /note="putative trimer interface [polypeptide binding]"
                     /db_xref="CDD:410605"
     Region          593..651
                     /region_name="HTH_SUN2"
                     /note="SUN2 helix-turn-helix domain; pfam18580"
                     /db_xref="CDD:436594"
     Region          694..828
                     /region_name="Sad1_UNC"
                     /note="Sad1 / UNC-like C-terminal; pfam07738"
                     /db_xref="CDD:400199"
     CDS             1..830
                     /gene="SUN1"
                     /coded_by="XM_061153848.1:152..2644"
                     /db_xref="GeneID:133063916"
ORIGIN      
        1 mdfsrlhtyt ppqcvpentg ytyalsssys sdaldfeteh kldpvfdspr msrrslrlvt
       61 taraagdgpa gdstarlakq rssthksafs vhpssrkvls savshggsgt vqaaacprpp
      121 vldeslireq tkvdhfwgld ddgdlkggnk aaiqgngevt agateaagsn gytcsdcsll
      181 serrsmltac saargpasrv ysrdrsqkph srhcgrmdar aplaedghlr angaslcddc
      241 kgrkrlethv tthsqlsrpg glagtlglal sraghlsgqa lrragaagwr gsrmllsalc
      301 laaaapgkaa sgvfwwlgig wyqlvtlisw lnvflltrcl rnickflill iplllllgag
      361 vslwgqgdvf sllpvlnwtq shrvqrvddp rttltpaash pnqplqvgde afhwrrmsev
      421 erqvamlsgq chshdeklgq laallqklqa rvdradgsse ggspptnyvt lhqehelris
      481 sledvlgelt erseaiqkel eqarlrtvsg ageeqrllal vgrleqelgh lkadlsswqh
      541 gqascekvea ihekvdvqir ealrlmfsgd ehdasvdwll rklsakfvsk gdvqvllrdl
      601 elqilrnith hisvtrempt setvvsavsg agisgiteaq arvivnnalk lysqdktgmv
      661 dfalesgggs vlstrcsety etktalislf gvplwyfsqs prvaiqpdiy pgncwafkgs
      721 qgylvvrlsm ticptaftle hipkalsptg sitsapkdfa vfgleneyqe egqllgrfty
      781 dqegeslqmf vapkkperaf qivelrifsn wghpeytcly rfrvhgepik
//
LOCUS       XP_061009832             827 aa            linear   MAM 02-DEC-2023
DEFINITION  SUN domain-containing protein 1 isoform X5 [Dama dama].
ACCESSION   XP_061009832
VERSION     XP_061009832.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153849.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..827
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..827
                     /product="SUN domain-containing protein 1 isoform X5"
                     /calculated_mol_wt=91103
     Region          62..342
                     /region_name="MRP"
                     /note="Mitochondrial RNA binding protein MRP; pfam09387"
                     /db_xref="CDD:430576"
     Region          <432..>532
                     /region_name="DR0291"
                     /note="Predicted nucleic acid-binding protein DR0291,
                     contains C4-type Zn-ribbon domain [General function
                     prediction only]; COG1579"
                     /db_xref="CDD:441187"
     Region          463..512
                     /region_name="SUN1_cc1"
                     /note="coiled-coil domain 1 of SUN domain-containing
                     protein 1 and similar proteins; cd21439"
                     /db_xref="CDD:410605"
     Site            order(465,468..469,472..473,475..476,479..480,482..483,
                     486..487,489..490,493,496..497,500,503..504,507..508,
                     510..512)
                     /site_type="other"
                     /note="putative trimer interface [polypeptide binding]"
                     /db_xref="CDD:410605"
     Region          590..648
                     /region_name="HTH_SUN2"
                     /note="SUN2 helix-turn-helix domain; pfam18580"
                     /db_xref="CDD:436594"
     Region          691..825
                     /region_name="Sad1_UNC"
                     /note="Sad1 / UNC-like C-terminal; pfam07738"
                     /db_xref="CDD:400199"
     CDS             1..827
                     /gene="SUN1"
                     /coded_by="XM_061153849.1:152..2635"
                     /db_xref="GeneID:133063916"
ORIGIN      
        1 mdfsrlhtyt ppqcvpentg ytyalsssys sdaldfeteh kldpvfdspr msrrslrlvt
       61 taraagdgpa gdstarlakq rssthksafs vhpssrkvls savshggsgt vqaaacprpp
      121 vldeslireq tkvdhfwgld ddgdlkggnk aaiqgngevt agateaagsn gytcsdcsll
      181 serrsmltac saargpasrv ysrdrsqkpg raarrgdgtw slaahtsasc asflvqlfqv
      241 vlmklnyese kyklkscesk dresksyese sheskahsrh cgrmdarapl aedghlrang
      301 aslwkaasgv fwwlgigwyq lvtliswlnv flltrclrni ckflillipl llllgagvsl
      361 wgqgdvfsll pvlnwtqshr vqrvddprtt ltpaashpnq plqvgdeafh wrrmseverq
      421 vamlsgqchs hdeklgqlaa llqklqarvd radgsseggs pptnyvtlhq ehelrissle
      481 dvlgelters eaiqkeleqa rlrtvsgage eqrllalvgr leqelghlka dlsswqhgqa
      541 scekveaihe kvdvqireal rlmfsgdehd asvdwllrkl sakfvskgdv qvllrdlelq
      601 ilrnithhis vtremptset vvsavsgagi sgiteaqarv ivnnalklys qdktgmvdfa
      661 lesgggsvls trcsetyetk talislfgvp lwyfsqsprv aiqpdiypgn cwafkgsqgy
      721 lvvrlsmtic ptaftlehip kalsptgsit sapkdfavfg leneyqeegq llgrftydqe
      781 geslqmfvap kkperafqiv elrifsnwgh peytclyrfr vhgepik
//
LOCUS       XP_061009833             825 aa            linear   MAM 02-DEC-2023
DEFINITION  SUN domain-containing protein 1 isoform X6 [Dama dama].
ACCESSION   XP_061009833
VERSION     XP_061009833.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153850.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..825
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..825
                     /product="SUN domain-containing protein 1 isoform X6"
                     /calculated_mol_wt=90975
     Region          62..342
                     /region_name="MRP"
                     /note="Mitochondrial RNA binding protein MRP; pfam09387"
                     /db_xref="CDD:430576"
     Region          <430..>530
                     /region_name="DR0291"
                     /note="Predicted nucleic acid-binding protein DR0291,
                     contains C4-type Zn-ribbon domain [General function
                     prediction only]; COG1579"
                     /db_xref="CDD:441187"
     Region          461..510
                     /region_name="SUN1_cc1"
                     /note="coiled-coil domain 1 of SUN domain-containing
                     protein 1 and similar proteins; cd21439"
                     /db_xref="CDD:410605"
     Site            order(463,466..467,470..471,473..474,477..478,480..481,
                     484..485,487..488,491,494..495,498,501..502,505..506,
                     508..510)
                     /site_type="other"
                     /note="putative trimer interface [polypeptide binding]"
                     /db_xref="CDD:410605"
     Region          588..646
                     /region_name="HTH_SUN2"
                     /note="SUN2 helix-turn-helix domain; pfam18580"
                     /db_xref="CDD:436594"
     Region          689..823
                     /region_name="Sad1_UNC"
                     /note="Sad1 / UNC-like C-terminal; pfam07738"
                     /db_xref="CDD:400199"
     CDS             1..825
                     /gene="SUN1"
                     /coded_by="XM_061153850.1:152..2629"
                     /db_xref="GeneID:133063916"
ORIGIN      
        1 mdfsrlhtyt ppqcvpentg ytyalsssys sdaldfeteh kldpvfdspr msrrslrlvt
       61 taraagdgpa gdstarlakq rssthksafs vhpssrkvls savshggsgt vqaaacprpp
      121 vldeslireq tkvdhfwgld ddgdlkggnk aaiqgngevt agateaagsn gytcsdcsll
      181 serrsmltac saargpasrv ysrdrsqkpg raarrgdgtw slaahtsasc asflvqlfqv
      241 vlmklnyese kyklkscesk dresksyese sheskahsrh cgrmdarapl aedghlrang
      301 aslwkaasgv fwwlgigwyq lvtliswlnv flltrclrni ckflillipl llllgvslwg
      361 qgdvfsllpv lnwtqshrvq rvddprttlt paashpnqpl qvgdeafhwr rmseverqva
      421 mlsgqchshd eklgqlaall qklqarvdra dgsseggspp tnyvtlhqeh elrissledv
      481 lgeltersea iqkeleqarl rtvsgageeq rllalvgrle qelghlkadl sswqhgqasc
      541 ekveaihekv dvqirealrl mfsgdehdas vdwllrklsa kfvskgdvqv llrdlelqil
      601 rnithhisvt remptsetvv savsgagisg iteaqarviv nnalklysqd ktgmvdfale
      661 sgggsvlstr csetyetkta lislfgvplw yfsqsprvai qpdiypgncw afkgsqgylv
      721 vrlsmticpt aftlehipka lsptgsitsa pkdfavfgle neyqeegqll grftydqege
      781 slqmfvapkk perafqivel rifsnwghpe ytclyrfrvh gepik
//
LOCUS       XP_061009834             793 aa            linear   MAM 02-DEC-2023
DEFINITION  SUN domain-containing protein 1 isoform X7 [Dama dama].
ACCESSION   XP_061009834
VERSION     XP_061009834.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153851.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..793
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..793
                     /product="SUN domain-containing protein 1 isoform X7"
                     /calculated_mol_wt=87049
     Region          <17..308
                     /region_name="MRP"
                     /note="Mitochondrial RNA binding protein MRP; pfam09387"
                     /db_xref="CDD:430576"
     Region          <398..>498
                     /region_name="DR0291"
                     /note="Predicted nucleic acid-binding protein DR0291,
                     contains C4-type Zn-ribbon domain [General function
                     prediction only]; COG1579"
                     /db_xref="CDD:441187"
     Region          429..478
                     /region_name="SUN1_cc1"
                     /note="coiled-coil domain 1 of SUN domain-containing
                     protein 1 and similar proteins; cd21439"
                     /db_xref="CDD:410605"
     Site            order(431,434..435,438..439,441..442,445..446,448..449,
                     452..453,455..456,459,462..463,466,469..470,473..474,
                     476..478)
                     /site_type="other"
                     /note="putative trimer interface [polypeptide binding]"
                     /db_xref="CDD:410605"
     Region          556..614
                     /region_name="HTH_SUN2"
                     /note="SUN2 helix-turn-helix domain; pfam18580"
                     /db_xref="CDD:436594"
     Region          657..791
                     /region_name="Sad1_UNC"
                     /note="Sad1 / UNC-like C-terminal; pfam07738"
                     /db_xref="CDD:400199"
     CDS             1..793
                     /gene="SUN1"
                     /coded_by="XM_061153851.1:140..2521"
                     /db_xref="GeneID:133063916"
ORIGIN      
        1 mksvyrhfpq rctfscngkq tsaaqqqknv cflgldddgd lkggnkaaiq gngevtagat
       61 eaagsngytc sdcsllserr smltacsaar gpasrvysrd rsqkpgraar rgdgtwslaa
      121 htsascasfl vqlfqvvlmk lnyesekykl ksceskdres ksyeseshes kahsrhcgrm
      181 daraplaedg hlrangaslc ddckgrkrle thvtthsqls rpgglagtlg lalsraghls
      241 gqalrragaa gwrgsrmlls alclaaaapg kaasgvfwwl gigwyqlvtl iswlnvfllt
      301 rclrnickfl illiplllll gagvslwgqg dvfsllpvln wtqshrvqrv ddprttltpa
      361 ashpnqplqv gdeafhwrrm severqvaml sgqchshdek lgqlaallqk lqarvdradg
      421 sseggspptn yvtlhqehel rissledvlg elterseaiq keleqarlrt vsgageeqrl
      481 lalvgrleqe lghlkadlss wqhgqascek veaihekvdv qirealrlmf sgdehdasvd
      541 wllrklsakf vskgdvqvll rdlelqilrn ithhisvtre mptsetvvsa vsgagisgit
      601 eaqarvivnn alklysqdkt gmvdfalesg ggsvlstrcs etyetktali slfgvplwyf
      661 sqsprvaiqp diypgncwaf kgsqgylvvr lsmticptaf tlehipkals ptgsitsapk
      721 dfavfglene yqeegqllgr ftydqegesl qmfvapkkpe rafqivelri fsnwghpeyt
      781 clyrfrvhge pik
//
LOCUS       XP_061009836             897 aa            linear   MAM 02-DEC-2023
DEFINITION  SUN domain-containing protein 1 isoform X8 [Dama dama].
ACCESSION   XP_061009836
VERSION     XP_061009836.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153853.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..897
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..897
                     /product="SUN domain-containing protein 1 isoform X8"
                     /calculated_mol_wt=98136
     Region          62..412
                     /region_name="MRP"
                     /note="Mitochondrial RNA binding protein MRP; pfam09387"
                     /db_xref="CDD:430576"
     Region          <502..>602
                     /region_name="DR0291"
                     /note="Predicted nucleic acid-binding protein DR0291,
                     contains C4-type Zn-ribbon domain [General function
                     prediction only]; COG1579"
                     /db_xref="CDD:441187"
     Region          533..582
                     /region_name="SUN1_cc1"
                     /note="coiled-coil domain 1 of SUN domain-containing
                     protein 1 and similar proteins; cd21439"
                     /db_xref="CDD:410605"
     Site            order(535,538..539,542..543,545..546,549..550,552..553,
                     556..557,559..560,563,566..567,570,573..574,577..578,
                     580..582)
                     /site_type="other"
                     /note="putative trimer interface [polypeptide binding]"
                     /db_xref="CDD:410605"
     Region          660..718
                     /region_name="HTH_SUN2"
                     /note="SUN2 helix-turn-helix domain; pfam18580"
                     /db_xref="CDD:436594"
     Region          761..895
                     /region_name="Sad1_UNC"
                     /note="Sad1 / UNC-like C-terminal; pfam07738"
                     /db_xref="CDD:400199"
     CDS             1..897
                     /gene="SUN1"
                     /coded_by="XM_061153853.1:236..2929"
                     /db_xref="GeneID:133063916"
ORIGIN      
        1 mdfsrlhtyt ppqcvpentg ytyalsssys sdaldfeteh kldpvfdspr msrrslrlvt
       61 taraagdgpa gdstarlakq rssthksafs vhpssrkvls savshggsgt vqaaacprpp
      121 vldeslireq tkvdhfwgld ddgdlkggnk aaiqgngevt agateaagsn gytcsdcsll
      181 serrsmltac saargpasrv ysrdrsqkpg raarrgdgtw slaahtsasc asflvqlfqv
      241 vlmklnyese kyklkscesk dresksyese sheskahsrh cgrmdarapl aedghlrang
      301 aslcddckgr krlethvtth sqlsrpggla gtlglalsra ghlsgqalrr agaagwrgsr
      361 mllsalclaa aapgkaasgv fwwlgigwyq lvtliswlnv flltrclrni ckflillipl
      421 llllgagvsl wgqgdvfsll pvlnwtqshr vqrvddprtt ltpaashpnq plqvgdeafh
      481 wrrmseverq vamlsgqchs hdeklgqlaa llqklqarvd radgsseggs pptnyvtlhq
      541 ehelrissle dvlgelters eaiqkeleqa rlrtvsgage eqrllalvgr leqelghlka
      601 dlsswqhgqa scekveaihe kvdvqireal rlmfsgdehd asvdwllrkl sakfvskgdv
      661 qvllrdlelq ilrnithhis vtremptset vvsavsgagi sgiteaqarv ivnnalklys
      721 qdktgmvdfa lesgggsvls trcsetyetk talislfgvp lwyfsqsprv aiqpdiypgn
      781 cwafkgsqgy lvvrlsmtic ptaftlehip kalsptgsit sapkdfavfg leneyqeegq
      841 llgrftydqe geslqmfvap kkperafqiv elrifsnwgh peytclyrfr vhgepik
//
LOCUS       XP_061009837             760 aa            linear   MAM 02-DEC-2023
DEFINITION  SUN domain-containing protein 1 isoform X9 [Dama dama].
ACCESSION   XP_061009837
VERSION     XP_061009837.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153854.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..760
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..760
                     /product="SUN domain-containing protein 1 isoform X9"
                     /calculated_mol_wt=83603
     Region          62..275
                     /region_name="MRP"
                     /note="Mitochondrial RNA binding protein MRP; pfam09387"
                     /db_xref="CDD:430576"
     Region          <365..>465
                     /region_name="DR0291"
                     /note="Predicted nucleic acid-binding protein DR0291,
                     contains C4-type Zn-ribbon domain [General function
                     prediction only]; COG1579"
                     /db_xref="CDD:441187"
     Region          396..445
                     /region_name="SUN1_cc1"
                     /note="coiled-coil domain 1 of SUN domain-containing
                     protein 1 and similar proteins; cd21439"
                     /db_xref="CDD:410605"
     Site            order(398,401..402,405..406,408..409,412..413,415..416,
                     419..420,422..423,426,429..430,433,436..437,440..441,
                     443..445)
                     /site_type="other"
                     /note="putative trimer interface [polypeptide binding]"
                     /db_xref="CDD:410605"
     Region          523..581
                     /region_name="HTH_SUN2"
                     /note="SUN2 helix-turn-helix domain; pfam18580"
                     /db_xref="CDD:436594"
     Region          624..758
                     /region_name="Sad1_UNC"
                     /note="Sad1 / UNC-like C-terminal; pfam07738"
                     /db_xref="CDD:400199"
     CDS             1..760
                     /gene="SUN1"
                     /coded_by="XM_061153854.1:152..2434"
                     /db_xref="GeneID:133063916"
ORIGIN      
        1 mdfsrlhtyt ppqcvpentg ytyalsssys sdaldfeteh kldpvfdspr msrrslrlvt
       61 taraagdgpa gdstarlakq rssthksafs vhpssrkvls savshggsgt vqaaacprpp
      121 vldeslireq tkvdhfwgld ddgdlkggnk aaiqgngevt agateaagsn gytcsdcsll
      181 serrsmltac saargpasrv ysrdrsqkph srhcgrmdar aplaedghlr angaslwkaa
      241 sgvfwwlgig wyqlvtlisw lnvflltrcl rnickflill iplllllgag vslwgqgdvf
      301 sllpvlnwtq shrvqrvddp rttltpaash pnqplqvgde afhwrrmsev erqvamlsgq
      361 chshdeklgq laallqklqa rvdradgsse ggspptnyvt lhqehelris sledvlgelt
      421 erseaiqkel eqarlrtvsg ageeqrllal vgrleqelgh lkadlsswqh gqascekvea
      481 ihekvdvqir ealrlmfsgd ehdasvdwll rklsakfvsk gdvqvllrdl elqilrnith
      541 hisvtrempt setvvsavsg agisgiteaq arvivnnalk lysqdktgmv dfalesgggs
      601 vlstrcsety etktalislf gvplwyfsqs prvaiqpdiy pgncwafkgs qgylvvrlsm
      661 ticptaftle hipkalsptg sitsapkdfa vfgleneyqe egqllgrfty dqegeslqmf
      721 vapkkperaf qivelrifsn wghpeytcly rfrvhgepik
//
LOCUS       XP_061009838             758 aa            linear   MAM 02-DEC-2023
DEFINITION  SUN domain-containing protein 1 isoform X10 [Dama dama].
ACCESSION   XP_061009838
VERSION     XP_061009838.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153855.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..758
                     /product="SUN domain-containing protein 1 isoform X10"
                     /calculated_mol_wt=83475
     Region          62..275
                     /region_name="MRP"
                     /note="Mitochondrial RNA binding protein MRP; pfam09387"
                     /db_xref="CDD:430576"
     Region          <363..>463
                     /region_name="DR0291"
                     /note="Predicted nucleic acid-binding protein DR0291,
                     contains C4-type Zn-ribbon domain [General function
                     prediction only]; COG1579"
                     /db_xref="CDD:441187"
     Region          394..443
                     /region_name="SUN1_cc1"
                     /note="coiled-coil domain 1 of SUN domain-containing
                     protein 1 and similar proteins; cd21439"
                     /db_xref="CDD:410605"
     Site            order(396,399..400,403..404,406..407,410..411,413..414,
                     417..418,420..421,424,427..428,431,434..435,438..439,
                     441..443)
                     /site_type="other"
                     /note="putative trimer interface [polypeptide binding]"
                     /db_xref="CDD:410605"
     Region          521..579
                     /region_name="HTH_SUN2"
                     /note="SUN2 helix-turn-helix domain; pfam18580"
                     /db_xref="CDD:436594"
     Region          622..756
                     /region_name="Sad1_UNC"
                     /note="Sad1 / UNC-like C-terminal; pfam07738"
                     /db_xref="CDD:400199"
     CDS             1..758
                     /gene="SUN1"
                     /coded_by="XM_061153855.1:152..2428"
                     /db_xref="GeneID:133063916"
ORIGIN      
        1 mdfsrlhtyt ppqcvpentg ytyalsssys sdaldfeteh kldpvfdspr msrrslrlvt
       61 taraagdgpa gdstarlakq rssthksafs vhpssrkvls savshggsgt vqaaacprpp
      121 vldeslireq tkvdhfwgld ddgdlkggnk aaiqgngevt agateaagsn gytcsdcsll
      181 serrsmltac saargpasrv ysrdrsqkph srhcgrmdar aplaedghlr angaslwkaa
      241 sgvfwwlgig wyqlvtlisw lnvflltrcl rnickflill iplllllgvs lwgqgdvfsl
      301 lpvlnwtqsh rvqrvddprt tltpaashpn qplqvgdeaf hwrrmsever qvamlsgqch
      361 shdeklgqla allqklqarv dradgssegg spptnyvtlh qehelrissl edvlgelter
      421 seaiqkeleq arlrtvsgag eeqrllalvg rleqelghlk adlsswqhgq ascekveaih
      481 ekvdvqirea lrlmfsgdeh dasvdwllrk lsakfvskgd vqvllrdlel qilrnithhi
      541 svtremptse tvvsavsgag isgiteaqar vivnnalkly sqdktgmvdf alesgggsvl
      601 strcsetyet ktalislfgv plwyfsqspr vaiqpdiypg ncwafkgsqg ylvvrlsmti
      661 cptaftlehi pkalsptgsi tsapkdfavf gleneyqeeg qllgrftydq egeslqmfva
      721 pkkperafqi velrifsnwg hpeytclyrf rvhgepik
//
LOCUS       XP_061009839             828 aa            linear   MAM 02-DEC-2023
DEFINITION  SUN domain-containing protein 1 isoform X11 [Dama dama].
ACCESSION   XP_061009839
VERSION     XP_061009839.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153856.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..828
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..828
                     /product="SUN domain-containing protein 1 isoform X11"
                     /calculated_mol_wt=90507
     Region          62..345
                     /region_name="MRP"
                     /note="Mitochondrial RNA binding protein MRP; pfam09387"
                     /db_xref="CDD:430576"
     Region          <433..>533
                     /region_name="DR0291"
                     /note="Predicted nucleic acid-binding protein DR0291,
                     contains C4-type Zn-ribbon domain [General function
                     prediction only]; COG1579"
                     /db_xref="CDD:441187"
     Region          464..513
                     /region_name="SUN1_cc1"
                     /note="coiled-coil domain 1 of SUN domain-containing
                     protein 1 and similar proteins; cd21439"
                     /db_xref="CDD:410605"
     Site            order(466,469..470,473..474,476..477,480..481,483..484,
                     487..488,490..491,494,497..498,501,504..505,508..509,
                     511..513)
                     /site_type="other"
                     /note="putative trimer interface [polypeptide binding]"
                     /db_xref="CDD:410605"
     Region          591..649
                     /region_name="HTH_SUN2"
                     /note="SUN2 helix-turn-helix domain; pfam18580"
                     /db_xref="CDD:436594"
     Region          692..826
                     /region_name="Sad1_UNC"
                     /note="Sad1 / UNC-like C-terminal; pfam07738"
                     /db_xref="CDD:400199"
     CDS             1..828
                     /gene="SUN1"
                     /coded_by="XM_061153856.1:152..2638"
                     /db_xref="GeneID:133063916"
ORIGIN      
        1 mdfsrlhtyt ppqcvpentg ytyalsssys sdaldfeteh kldpvfdspr msrrslrlvt
       61 taraagdgpa gdstarlakq rssthksafs vhpssrkvls savshggsgt vqaaacprpp
      121 vldeslireq tkvdhfwgld ddgdlkggnk aaiqgngevt agateaagsn gytcsdcsll
      181 serrsmltac saargpasrv ysrdrsqkph srhcgrmdar aplaedghlr angaslcddc
      241 kgrkrlethv tthsqlsrpg glagtlglal sraghlsgqa lrragaagwr gsrmllsalc
      301 laaaapgkaa sgvfwwlgig wyqlvtlisw lnvflltrcl rnickflill iplllllgvs
      361 lwgqgdvfsl lpvlnwtqsh rvqrvddprt tltpaashpn qplqvgdeaf hwrrmsever
      421 qvamlsgqch shdeklgqla allqklqarv dradgssegg spptnyvtlh qehelrissl
      481 edvlgelter seaiqkeleq arlrtvsgag eeqrllalvg rleqelghlk adlsswqhgq
      541 ascekveaih ekvdvqirea lrlmfsgdeh dasvdwllrk lsakfvskgd vqvllrdlel
      601 qilrnithhi svtremptse tvvsavsgag isgiteaqar vivnnalkly sqdktgmvdf
      661 alesgggsvl strcsetyet ktalislfgv plwyfsqspr vaiqpdiypg ncwafkgsqg
      721 ylvvrlsmti cptaftlehi pkalsptgsi tsapkdfavf gleneyqeeg qllgrftydq
      781 egeslqmfva pkkperafqi velrifsnwg hpeytclyrf rvhgepik
//
LOCUS       XP_061009840             863 aa            linear   MAM 02-DEC-2023
DEFINITION  dynein axonemal assembly factor 5 [Dama dama].
ACCESSION   XP_061009840
VERSION     XP_061009840.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153857.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..863
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..863
                     /product="dynein axonemal assembly factor 5"
                     /calculated_mol_wt=94049
     Site            order(151..152,155,158..159,192..193,196,199..200,205,
                     233..234,237,240..241,243,271..272,275,279..280,312)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          175..205
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          215..244
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          253..280
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          367..393
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          709..742
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          751..777
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          795..821
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     CDS             1..863
                     /gene="DNAAF5"
                     /coded_by="XM_061153857.1:12..2603"
                     /db_xref="GeneID:133063917"
ORIGIN      
        1 maalvapeaa aprgpteage tteeaelsrs lsrllpglea dsklgrrral ealqraleaa
       61 qpeapdadpd aaaaafqgpw vhlllprllr rladpaegcr tlavhllglg lrraarprda
      121 lprllpalaa rlaspeparr pppeaceelr lalvqllgla vrlagaafap hlddavralr
      181 ctlldpfaav rrescecaag laratpdhfh mqsesligpl mqsishqhwk vrvavieatg
      241 tviqfgsgks vddvlphfaq rlfddvpqvr qavtrvvggw llslrdrysf fhklipllls
      301 gfhdeipeia ceatslweqv glqwqtenee dlkdkldfas pppthhpspg srpglgcrel
      361 icrnlskilp avwhdiadwv vgtrvksaql lavlllhaed hvtqhlepvl rallracade
      421 eaavvcscar saelvgtfvs pevflklils tlrkspspsg llvlaslirg cprealqphv
      481 kviamelaqa hicqgsenll ygerllqcvq avvsvgqedc rgagepllev lvtilalwgp
      541 tglgdkvqet laelaavegv dssqdlfrah vspllewlaa shqdwtghsm ellqldvvlt
      601 hsgpalgeal pqlvpilrsc lqpardpamr lklfstltgv llgapetvds qgqlhgyldt
      661 lvqdilvpnl qwhagrtaaa irtaavsclw alvssgvlsd gqiqdvqetl mpqilttlee
      721 dsqmtrlisc riinlflkts ngvidpdkfi kiypellkrl ddvsndvrla atsalvtwlq
      781 rvqreaskcc yessirhlyr ellvylddpe rtvqdavlea lkagsvlfpd llvreteaal
      841 hqhrspthce qllqhlralp pap
//
LOCUS       XP_061009841             227 aa            linear   MAM 02-DEC-2023
DEFINITION  platelet-derived growth factor subunit A isoform X1 [Dama dama].
ACCESSION   XP_061009841
VERSION     XP_061009841.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153858.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..227
                     /product="platelet-derived growth factor subunit A isoform
                     X1"
                     /calculated_mol_wt=25018
     Region          21..94
                     /region_name="PDGF_N"
                     /note="Platelet-derived growth factor, N terminal region;
                     pfam04692"
                     /db_xref="CDD:461394"
     Region          94..181
                     /region_name="PDGF"
                     /note="Platelet-derived and vascular endothelial growth
                     factors (PDGF, VEGF) family; smart00141"
                     /db_xref="CDD:197537"
     Site            order(94..97,133,135..138,153..156)
                     /site_type="active"
                     /note="receptor binding interface [active]"
                     /db_xref="CDD:238079"
     Site            order(96,129,133,140,177,179)
                     /site_type="other"
                     /note="cysteine knot motif"
                     /db_xref="CDD:238079"
     Site            order(123,132)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238079"
     CDS             1..227
                     /gene="PDGFA"
                     /coded_by="XM_061153858.1:242..925"
                     /db_xref="GeneID:133063918"
ORIGIN      
        1 mrtwacllll gcgylanala eeaeiprevi erlahsqihs irdlqrllei dsvgaeeple
       61 tslrahgghg akhapekrpv pirrkrsiee aipaacktrt viyeiprsqv dptsanfliw
      121 ppcvevkrct gccntssvkc qpsrvhhrsv kvakveyfrk kaklkevqvr leehlectca
      181 saspspehre eeaarvvsge mqpvpggwqa latalvlgdl afsgrlp
//
LOCUS       XP_061009842             211 aa            linear   MAM 02-DEC-2023
DEFINITION  platelet-derived growth factor subunit A isoform X2 [Dama dama].
ACCESSION   XP_061009842
VERSION     XP_061009842.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153859.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..211
                     /product="platelet-derived growth factor subunit A isoform
                     X2"
                     /calculated_mol_wt=23763
     Region          21..94
                     /region_name="PDGF_N"
                     /note="Platelet-derived growth factor, N terminal region;
                     pfam04692"
                     /db_xref="CDD:461394"
     Region          94..181
                     /region_name="PDGF"
                     /note="Platelet-derived and vascular endothelial growth
                     factors (PDGF, VEGF) family; smart00141"
                     /db_xref="CDD:197537"
     Site            order(94..97,133,135..138,153..156)
                     /site_type="active"
                     /note="receptor binding interface [active]"
                     /db_xref="CDD:238079"
     Site            order(96,129,133,140,177,179)
                     /site_type="other"
                     /note="cysteine knot motif"
                     /db_xref="CDD:238079"
     Site            order(123,132)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238079"
     CDS             1..211
                     /gene="PDGFA"
                     /coded_by="XM_061153859.1:236..871"
                     /db_xref="GeneID:133063918"
ORIGIN      
        1 mrtwacllll gcgylanala eeaeiprevi erlahsqihs irdlqrllei dsvgaeeple
       61 tslrahgghg akhapekrpv pirrkrsiee aipaacktrt viyeiprsqv dptsanfliw
      121 ppcvevkrct gccntssvkc qpsrvhhrsv kvakveyfrk kaklkevqvr leehlectca
      181 saspspehre eeagrrresg kkrkrkklkp t
//
LOCUS       XP_061009843             211 aa            linear   MAM 02-DEC-2023
DEFINITION  platelet-derived growth factor subunit A isoform X2 [Dama dama].
ACCESSION   XP_061009843
VERSION     XP_061009843.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153860.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..211
                     /product="platelet-derived growth factor subunit A isoform
                     X2"
                     /calculated_mol_wt=23763
     Region          21..94
                     /region_name="PDGF_N"
                     /note="Platelet-derived growth factor, N terminal region;
                     pfam04692"
                     /db_xref="CDD:461394"
     Region          94..181
                     /region_name="PDGF"
                     /note="Platelet-derived and vascular endothelial growth
                     factors (PDGF, VEGF) family; smart00141"
                     /db_xref="CDD:197537"
     Site            order(94..97,133,135..138,153..156)
                     /site_type="active"
                     /note="receptor binding interface [active]"
                     /db_xref="CDD:238079"
     Site            order(96,129,133,140,177,179)
                     /site_type="other"
                     /note="cysteine knot motif"
                     /db_xref="CDD:238079"
     Site            order(123,132)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238079"
     CDS             1..211
                     /gene="PDGFA"
                     /coded_by="XM_061153860.1:238..873"
                     /db_xref="GeneID:133063918"
ORIGIN      
        1 mrtwacllll gcgylanala eeaeiprevi erlahsqihs irdlqrllei dsvgaeeple
       61 tslrahgghg akhapekrpv pirrkrsiee aipaacktrt viyeiprsqv dptsanfliw
      121 ppcvevkrct gccntssvkc qpsrvhhrsv kvakveyfrk kaklkevqvr leehlectca
      181 saspspehre eeagrrresg kkrkrkklkp t
//
LOCUS       XP_061009844             211 aa            linear   MAM 02-DEC-2023
DEFINITION  platelet-derived growth factor subunit A isoform X2 [Dama dama].
ACCESSION   XP_061009844
VERSION     XP_061009844.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153861.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..211
                     /product="platelet-derived growth factor subunit A isoform
                     X2"
                     /calculated_mol_wt=23763
     Region          21..94
                     /region_name="PDGF_N"
                     /note="Platelet-derived growth factor, N terminal region;
                     pfam04692"
                     /db_xref="CDD:461394"
     Region          94..181
                     /region_name="PDGF"
                     /note="Platelet-derived and vascular endothelial growth
                     factors (PDGF, VEGF) family; smart00141"
                     /db_xref="CDD:197537"
     Site            order(94..97,133,135..138,153..156)
                     /site_type="active"
                     /note="receptor binding interface [active]"
                     /db_xref="CDD:238079"
     Site            order(96,129,133,140,177,179)
                     /site_type="other"
                     /note="cysteine knot motif"
                     /db_xref="CDD:238079"
     Site            order(123,132)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238079"
     CDS             1..211
                     /gene="PDGFA"
                     /coded_by="XM_061153861.1:238..873"
                     /db_xref="GeneID:133063918"
ORIGIN      
        1 mrtwacllll gcgylanala eeaeiprevi erlahsqihs irdlqrllei dsvgaeeple
       61 tslrahgghg akhapekrpv pirrkrsiee aipaacktrt viyeiprsqv dptsanfliw
      121 ppcvevkrct gccntssvkc qpsrvhhrsv kvakveyfrk kaklkevqvr leehlectca
      181 saspspehre eeagrrresg kkrkrkklkp t
//
LOCUS       XP_061009845             196 aa            linear   MAM 02-DEC-2023
DEFINITION  platelet-derived growth factor subunit A isoform X3 [Dama dama].
ACCESSION   XP_061009845
VERSION     XP_061009845.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153862.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..196
                     /product="platelet-derived growth factor subunit A isoform
                     X3"
                     /calculated_mol_wt=21941
     Region          21..94
                     /region_name="PDGF_N"
                     /note="Platelet-derived growth factor, N terminal region;
                     pfam04692"
                     /db_xref="CDD:461394"
     Region          94..181
                     /region_name="PDGF"
                     /note="Platelet-derived and vascular endothelial growth
                     factors (PDGF, VEGF) family; smart00141"
                     /db_xref="CDD:197537"
     Site            order(94..97,133,135..138,153..156)
                     /site_type="active"
                     /note="receptor binding interface [active]"
                     /db_xref="CDD:238079"
     Site            order(96,129,133,140,177,179)
                     /site_type="other"
                     /note="cysteine knot motif"
                     /db_xref="CDD:238079"
     Site            order(123,132)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238079"
     CDS             1..196
                     /gene="PDGFA"
                     /coded_by="XM_061153862.1:235..825"
                     /db_xref="GeneID:133063918"
ORIGIN      
        1 mrtwacllll gcgylanala eeaeiprevi erlahsqihs irdlqrllei dsvgaeeple
       61 tslrahgghg akhapekrpv pirrkrsiee aipaacktrt viyeiprsqv dptsanfliw
      121 ppcvevkrct gccntssvkc qpsrvhhrsv kvakveyfrk kaklkevqvr leehlectca
      181 saspspehre eeadvr
//
LOCUS       XP_061009846             586 aa            linear   MAM 02-DEC-2023
DEFINITION  extracellular serine/threonine protein kinase FAM20C [Dama dama].
ACCESSION   XP_061009846
VERSION     XP_061009846.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153863.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..586
                     /product="extracellular serine/threonine protein kinase
                     FAM20C"
                     /calculated_mol_wt=65793
     Region          356..567
                     /region_name="FAM20C_C"
                     /note="C-terminal putative kinase domain of FAM20C (also
                     known as Dentin Matrix Protein 4, DMP4); cd10471"
                     /db_xref="CDD:198462"
     Site            order(453,460,480)
                     /site_type="active"
                     /note="putative catalytic residues [active]"
                     /db_xref="CDD:198462"
     Site            457..465
                     /site_type="active"
                     /note="putative catalytic loop [active]"
                     /db_xref="CDD:198462"
     Site            order(465,480)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:198462"
     Site            480..502
                     /site_type="other"
                     /note="putative activation loop"
                     /db_xref="CDD:198462"
     CDS             1..586
                     /gene="FAM20C"
                     /coded_by="XM_061153863.1:157..1917"
                     /db_xref="GeneID:133063919"
ORIGIN      
        1 mkmilvrrfr vlilmaflaa calhlvldll pklersaarp sgepgcscaq paaeaaapgw
       61 aqarghpgge laaaasaagd agwpnkhtlr ilqdfssdps snltshslek lppaaepaeg
      121 appgqdpgvp rppdpthrrl lpdsgprgpv pppglsqdgs llarlfqhpl yqapipplte
      181 gdvlfnvnsd irfnpkaatg enpdwphegp edgflptgea avdsypnwlk fhiginryel
      241 ysrhnpavea llrdlgtqki tsvamksggt qlklimtfqn ygqalfkpmk qtreqetppd
      301 ffyfsdyerh naeiaafhld rildfrrvpp vagrlvnmtk eirdvtrdkk lwrtffispa
      361 nnicfygecs yycstehalc gkpdqiegsl aaflpdlsla krktwrnpwr rsyhkrkkae
      421 wevdpdycee vkqtppydss hrildvmdmt ifdflmgnmd rhhyetfekf gnetfiihld
      481 ngrgfgkhsh delsilvplq qccrirrsty lrlqllakee hrlsllmaes lradrvapvl
      541 fqphlealdr rlrivlravr dcvekdglhs vveddlgpeh raaagr
//
LOCUS       XP_061009847             142 aa            linear   MAM 02-DEC-2023
DEFINITION  small ribosomal subunit protein uS10-like [Dama dama].
ACCESSION   XP_061009847
VERSION     XP_061009847.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153864.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 16% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..142
                     /product="small ribosomal subunit protein uS10-like"
                     /calculated_mol_wt=16408
     Region          16..115
                     /region_name="rpsJ"
                     /note="30S ribosomal protein S10; Reviewed; cl00314"
                     /db_xref="CDD:469716"
     CDS             1..142
                     /gene="LOC133063921"
                     /coded_by="XM_061153864.1:1..429"
                     /db_xref="GeneID:133063921"
ORIGIN      
        1 mafkdtdktp vepevaihwi ritltshnvk slekvyadli rgekeknlka kgpvqmptks
       61 lritmrktpc gegsktwdrf qmrihkrlid lhrpseivkq itsissepev kveittadac
      121 yylfnkliik lfkkkkkkkd kc
//
LOCUS       XP_061009848             382 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 64-like [Dama dama].
ACCESSION   XP_061009848
VERSION     XP_061009848.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153865.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 16% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..382
                     /product="transmembrane protein 64-like"
                     /calculated_mol_wt=40591
     Region          124..342
                     /region_name="TVP38"
                     /note="Uncharacterized membrane protein YdjX, related to
                     fungal oxalate transporter, TVP38/TMEM64 family [Function
                     unknown]; COG0398"
                     /db_xref="CDD:440167"
     CDS             1..382
                     /gene="LOC133063922"
                     /coded_by="XM_061153865.1:1..1149"
                     /db_xref="GeneID:133063922"
ORIGIN      
        1 mpghlrrgdv rapcelwnrd cttrghrash rcllspllpl hpvssqntra rprlliaspe
       61 sncraapgal lsaclerhap ldasdlpgpg galaggpggg gvvvgvaevr swrccclgst
      121 cwcrslvlvc vlaavcfasl alvrcylqhl llwaesldsl lgvllfvvgf ivvsfpcgwg
      181 yivlnvaagy lygfvlgmgl mvvgvligtf iahvvckwll tawvaariqs seklsavirv
      241 veggsglkvv alarltpipf glqnavfsit dlslpnylva ssvgllptql lnsylgttlr
      301 tmedviaeqs isgyfvfclq iiisiglmfy vvhraqveln aaivacemel ksslvkgsqp
      361 nisgspfykr tltfsgdgvn iv
//
LOCUS       XP_061009849             154 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein uL23-like [Dama dama].
ACCESSION   XP_061009849
VERSION     XP_061009849.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153866.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..154
                     /product="large ribosomal subunit protein uL23-like"
                     /calculated_mol_wt=17609
     Region          34..154
                     /region_name="PTZ00191"
                     /note="60S ribosomal protein L23a; Provisional"
                     /db_xref="CDD:185507"
     CDS             1..154
                     /gene="LOC133063923"
                     /coded_by="XM_061153866.1:1..465"
                     /db_xref="GeneID:133063923"
ORIGIN      
        1 mhslwlpkay iqleakakal kakkavlkgv hshkkkkirr sptfqrpktl rlrrqpkypr
       61 ksaprrnkld hyaiiklplt iqsamkkted nntlvfivdv kankhqtrqa vkklydidva
      121 kvntlirpdg ekkayvrlap dydaldaank igii
//
LOCUS       XP_061009850             204 aa            linear   MAM 02-DEC-2023
DEFINITION  cardiotrophin-2-like [Dama dama].
ACCESSION   XP_061009850
VERSION     XP_061009850.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153867.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..204
                     /product="cardiotrophin-2-like"
                     /calculated_mol_wt=22292
     Region          25..197
                     /region_name="LIF_OSM"
                     /note="LIF / OSM family; cl21565"
                     /db_xref="CDD:419736"
     CDS             1..204
                     /gene="LOC133063931"
                     /coded_by="XM_061153867.1:1..615"
                     /db_xref="GeneID:133063931"
ORIGIN      
        1 mtshlmapfc lltlllppls lgaptstaes itqaynlald mqmqtsallq tylehqgtpf
       61 sdpdfsspgl slitlpstdm pfeiwhgled gerlsltqea fwsfsqhfql akddqsdlnp
      121 gnsivvgqle earlkakgla gnlagimtal dlltppentp hgsvplgdsv ferkcrgyvi
      181 irdysfwtdr avtflgelka kyse
//
LOCUS       XP_061009852             259 aa            linear   MAM 02-DEC-2023
DEFINITION  ferritin heavy chain-like [Dama dama].
ACCESSION   XP_061009852
VERSION     XP_061009852.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153869.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..259
                     /product="ferritin heavy chain-like"
                     /calculated_mol_wt=28817
     Region          92..252
                     /region_name="Euk_Ferritin"
                     /note="eukaryotic ferritins; cd01056"
                     /db_xref="CDD:153114"
     Site            order(106,113,140..141,144,186,220)
                     /site_type="other"
                     /note="ferroxidase diiron center [ion binding]"
                     /db_xref="CDD:153114"
     Site            order(136,139..140,143)
                     /site_type="active"
                     /note="ferrihydrite nucleation center [active]"
                     /db_xref="CDD:153114"
     Site            order(197,210,213)
                     /site_type="active"
                     /note="iron ion channel [active]"
                     /db_xref="CDD:153114"
     CDS             1..259
                     /gene="LOC133063935"
                     /coded_by="XM_061153869.1:1..780"
                     /db_xref="GeneID:133063935"
ORIGIN      
        1 mvrrsdlysp dslrgesprf pastvlernp aarpppspgr llrasprphl tapsdrskvp
       61 aaapaqrsaa vapshppavt taspsqerqn rhqaseaais rqislelhas cvylsmsyyf
      121 drddvalknf akyflhpshe egehaerpmk lqnqrggrif lqdikkpdrd dweiglname
      181 calclersvn qsllelhkla tekndphlcd ftethylneq veaikelgdh itnlremgap
      241 gsgmaeylfd khtlghses
//
LOCUS       XP_061009853             259 aa            linear   MAM 02-DEC-2023
DEFINITION  U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Dama dama].
ACCESSION   XP_061009853
VERSION     XP_061009853.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153870.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 27% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..259
                     /product="U11/U12 small nuclear ribonucleoprotein 25 kDa
                     protein"
                     /calculated_mol_wt=28067
     Region          167..255
                     /region_name="Ubl_SNRNP25"
                     /note="ubiquitin-like (Ubl) domain found in small nuclear
                     ribonucleoprotein U11/U12 subunit 25 (SNRNP25) and similar
                     proteins; cd17058"
                     /db_xref="CDD:340578"
     CDS             1..259
                     /gene="SNRNP25"
                     /coded_by="XM_061153870.1:1..780"
                     /db_xref="GeneID:133063936"
ORIGIN      
        1 maatgpalpa epaaapsrrs erplapappc qptnnhaasp ppgravagrl svahlalvlq
       61 wprppaprrr gsggrpgaca paaagrvgra ggagwkpgal eeprvaarpe pqddeedeee
      121 alphseavdv fqeglamvvq dpllcdlpiq vtleevnsqi aleygqamtv rvckmdgevm
      181 pvvvvqnatv ldlkkaiqry vqlrqeregg iqhiswsyvw rtyhltsage kltedrkklr
      241 dygirnrdev sfikklrqk
//
LOCUS       XP_061009854             307 aa            linear   MAM 02-DEC-2023
DEFINITION  proline-rich protein 2-like [Dama dama].
ACCESSION   XP_061009854
VERSION     XP_061009854.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153871.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..307
                     /product="proline-rich protein 2-like"
                     /calculated_mol_wt=31187
     Region          <13..264
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..307
                     /gene="LOC133063937"
                     /coded_by="XM_061153871.1:1..924"
                     /db_xref="GeneID:133063937"
ORIGIN      
        1 mrppvdrlgl gappspqgra qarqpspppl pqaapspsel agtpaagreg pqeglglqps
       61 lapgsslpcp prpvmqavsr rlasplgtlg rplqgrreaw awlppgppph ggrehmwgrp
      121 pglpprggir tldqaappyp pgswkglpra qasrqaaplr tvglamvdap pqgwepgsgl
      181 qmatvggprp qgdtearach glgaaagppr wlpsaegpsl qapgltplra egqvpaehps
      241 gaggqtclgp pspagflarp pggparllpp wpghrggppg pagrlrrsgk lgvgerrsgr
      301 lrvlsqa
//
LOCUS       XP_061009855             272 aa            linear   MAM 02-DEC-2023
DEFINITION  basic salivary proline-rich protein 2-like [Dama dama].
ACCESSION   XP_061009855
VERSION     XP_061009855.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153872.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..272
                     /product="basic salivary proline-rich protein 2-like"
                     /calculated_mol_wt=27282
     CDS             1..272
                     /gene="LOC133063938"
                     /coded_by="XM_061153872.1:1..819"
                     /db_xref="GeneID:133063938"
ORIGIN      
        1 mrpppppagd gwaapppppg rgpapeglpc rspqveegpg aqrgarphrv sprsgcrrrp
       61 rghrpggavt adlarrsapa gapppparap sprprptgsr sgsrsgwpgs dggggraqra
      121 prggrargag rggrgpggga arrraiadpv raprrklrti pgpaeppnts gratvseeqg
      181 laprcletep rgaslslrga egqalqeqpc pfraggrast gldpcpagmp pvtgpsacpg
      241 psilgchpss raiwglpapw tvppptpaqg gs
//
LOCUS       XP_061009856            2355 aa            linear   MAM 02-DEC-2023
DEFINITION  voltage-dependent T-type calcium channel subunit alpha-1H [Dama
            dama].
ACCESSION   XP_061009856
VERSION     XP_061009856.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153873.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2355
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2355
                     /product="voltage-dependent T-type calcium channel subunit
                     alpha-1H"
                     /calculated_mol_wt=258226
     Region          103..435
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          791..1025
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          <1058..1200
                     /region_name="KLF9_13_N-like"
                     /note="Kruppel-like factor (KLF) 9, KLF13, KLF14, KLF16,
                     and similar proteins; cl41730"
                     /db_xref="CDD:425361"
     Region          1304..1575
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          1627..1858
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          <1898..2348
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..2355
                     /gene="CACNA1H"
                     /coded_by="XM_061153873.1:1..7068"
                     /db_xref="GeneID:133063940"
ORIGIN      
        1 mtegvqavde vrvplgapap gpaaaaaaaa aaspaspgap gpeaergsgp sasppespaa
       61 ergaelgade eqpvpypala atvffclgqt trprswclrl vcnpwfehvs mlvimlncvt
      121 lgmfrpcedv ecrsercgil eafddfifaf favemvikmi alglfgqkcy lgdtwnrldf
      181 fivmagmmey sldghnvsls airtvrvlrp lrainrvpsm rilvtllldt lpmlgnvlll
      241 cffvffifgi vgvqlwagll rnrcfldstf arnsnlsflr pyyqpeegee npficssrrd
      301 ngmqkcship srrelrvect lgweaygqpq aegaggtghh tcinwnqyyn vcrsgdsnph
      361 ngaisfdnig yawiaifqvi tlegwvdimy yvmdahsfyn fiyfilliiv gsffminlcl
      421 vviatqfset kqrenqlmre qrarylsnds tlasfsepgs cyeellryvg hvcrklkrrg
      481 lrlyarwqsr wrkkadpgga vrgrdsgrrp rraggrtasv hhlvyhhhhh hhhhyhfshg
      541 sprrpgpepg agdarlvrag gpaspgrgpp daesvhsvyh adchvegpqe rarvahtaat
      601 aaaglklaag lgamnyptil psatgtgkgg lgpkgkwhgg ppgagghspl rlsspdpcek
      661 iqhlvgehgl gqapsrlsgl svpcplpspq agtltcelss cpyctsaled pelefsdsgs
      721 gdsdsngvye ftqdvrhgdh rdpmqsppet eapgaggtrr rgprraaage qgglgriwas
      781 fsgklrrivd skyfnrgimv ailtntlsmg veyheqpdel tnaleisniv ftsmfaleml
      841 lkllacgplg yirnpynifd giivvisvwe iigqadggls vlrtfrllrv lklvrfmpal
      901 rrqlvvlmkt mdnvatfcml lmlfififsi lgmhlfgckf slktdtgdtv pdrknfdsll
      961 waivtvfqil tqedwnvvly ngmastsswa alyfvalmtf gnyvlfnllv ailvegfqae
     1021 gdatrsdtde dktsthleed ldkfrdlrat emkmyslavt pnghlegrgs lppplimrta
     1081 atpmptpkss phldaapgpl dsrrgssssm dpqlgdqksl sslrsspctp wgpnsawssr
     1141 rsswnslgra pslkrrsqcg eresllsgeg rgsgstdeea edgrpgagas pgtratplrr
     1201 aesldhrstl dlrpprpatl lptkthdcng qvlalpseff lridshkedp aefdddveds
     1261 cclrlqkvle phkpeccrsr epwalylfsp qnrfrvscqk iiahkmfdhv vlvfiflnci
     1321 tialerpdid pgstervfls vsnyiftaif vvemmvkvva lglvsgehay lqsswnildg
     1381 vlvlvslvdi vvamasagga kilgilrvlr llrtlrplrv israpglklv vetlisslrp
     1441 ignivlicca ffiifgilgv qlfkgkfyyc egadtrnist kaecraahyr wvrrkynfdn
     1501 lgqalmslfv lsskdgwvni mydgldavgv dqqpvpnhnp wmllyfisfl livsffvlnm
     1561 fvgvvvenfh kcrqhqeaee arrreekrqr rlerkrrstf pnpeaqrrpy yadysptrrs
     1621 ihtlctshyl dlfitfiigv nvitmsmehy nqpkaldeal kycnyvftiv fvveamlklv
     1681 afgfrrffkd rwnqldlaiv llsimgitle eiemnaalpi nptiirimrv lriarvlkll
     1741 kmatgmrall dtvvqalpqv gnlgllfmll ffiyaalgve lfgrlecsed npceglsrha
     1801 tfsnfgmafl tlfrvstgdn wngimkdtlr ecaredkhcl tylpaispiy fvtfvlvaqf
     1861 vlvnvvvavl mkhleesnke aredaeldae lememaqgsp arprpaapqs pgaspdspnv
     1921 lvvrkvsvsr mlslpndsym frpvvpaaaa hphplqevem etyagasgra ttahsppves
     1981 caslqvpsav ssparggdtl calpprgaar spsvgrllcr qeavrtesle gqvdgtgass
     2041 pywgepggkt pvrqaslgps mqspprsprp asirtrkhts gqhclssrpp apggeeaeap
     2101 dpadeevshi tssarspsas ptargmvgge pglhrlysvd argfldqpgr vdeqrrpsge
     2161 pgvgdsrpea geakpralea elalgarrkk kmsppcisie ppaedegaar apaaegsstt
     2221 lrrrtpscea vphrdplepa dgagldaaak gerrgqapcr tehltvpnfa fepldvggps
     2281 gdlftdgghg aapeprpsss gttappepre teppvpsgvp peegrgvhlt vpesppkrvs
     2341 ppavpvpgds vdepv
//
LOCUS       XP_061009857             413 aa            linear   MAM 02-DEC-2023
DEFINITION  mastin-like [Dama dama].
ACCESSION   XP_061009857
VERSION     XP_061009857.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153874.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 33% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..413
                     /product="mastin-like"
                     /calculated_mol_wt=44282
     Region          164..406
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            order(209,259,361)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(355,380,382)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..413
                     /gene="LOC133063941"
                     /coded_by="XM_061153874.1:1..1242"
                     /db_xref="GeneID:133063941"
ORIGIN      
        1 mggwmlrplp apalrpsyra pvlssgssrt vpsgptvsai aseipslrae rvlcpsaggg
       61 egggqlcprr mvacsscpte hsglrgcpea haaqplanaa phpaspgwcs rtssskpass
      121 srssgpvsag lvmlwllflt llgpggsmpv sldpnlgreq hgtvgvhdap pgrwpwqasl
      181 qwhskereqw ehvcggslvh pqwvltaahc trrespqasa frvqvgqlrl cdpdrlmkvt
      241 eiiphpdydh llsakggadi allrlespmt lsphvrvvsl ppaslrvpeg kmcwvtgwgd
      301 irlrgplspp hhlqeaevpi vgnevcnrhy qnsstdaahq iikddmlcag segrdscqgd
      361 sggplvcswn rtwvqvgvvs wgdicghrdf pgvytrvtsy vswirqyvpp prp
//
LOCUS       XP_061009858             227 aa            linear   MAM 02-DEC-2023
DEFINITION  BRICHOS domain-containing protein 5 [Dama dama].
ACCESSION   XP_061009858
VERSION     XP_061009858.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153875.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..227
                     /product="BRICHOS domain-containing protein 5"
                     /calculated_mol_wt=25074
     Region          98..192
                     /region_name="BRICHOS"
                     /note="The BRICHOS domain is found in a variety of
                     proteins implicated in dementia, respiratory distress and
                     cancer; smart01039"
                     /db_xref="CDD:198107"
     CDS             1..227
                     /gene="BRICD5"
                     /coded_by="XM_061153875.1:1..684"
                     /db_xref="GeneID:133063942"
ORIGIN      
        1 meqgsrwaer ptpvrvetkp crgrwrapgv llllllllal attaavaggl lgfshspsqp
       61 plqtlrlslp spgmprsnqt eqvdvaqnva tirvtpaqsn hswavlfdgq sgcvcyrpse
      121 hracflrlme prdrealqlm vntsqlqatr spsqdthyaq ellavlgsqe vdpaqvgapv
      181 rhlcaktpiy warraegsqr qrliylcidi cfpnnicvsv cfyylpd
//
LOCUS       XP_061009860             594 aa            linear   MAM 02-DEC-2023
DEFINITION  serine protease 27 [Dama dama].
ACCESSION   XP_061009860
VERSION     XP_061009860.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153877.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 46% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..594
                     /product="serine protease 27"
                     /calculated_mol_wt=63274
     Region          <28..>200
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          306..545
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            order(345,394,499)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(493,518,520)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..594
                     /gene="PRSS27"
                     /coded_by="XM_061153877.1:1..1785"
                     /db_xref="GeneID:133063943"
ORIGIN      
        1 malvrtctgs lgssvpdfpg saatsrrkhg gyregggqst sgckgcrgpp hrspgrslar
       61 dragppacaq nacagcwrre grggehegdr grtgrkraar seerrepppg lalpgrpaip
      121 irgqdcvdpa lqgwggggag rgrptsapap pgarripcag reaeaglclc staphpkpgi
      181 tlpeplprrp hvptrpatpr agtryghpar psqnhlpprp pgprfregpp pppaghithf
      241 meprasclst rrschhcplp gghssqaetm rqlpavalll lllrsgtqgg ealnacgrpr
      301 mlnrmvggqn alegewpwqv siqrngshfc ggslitdrwv ltaahcfsnt setplyqvll
      361 gvlqlarpgp havyarvkrv esnpqyqgma ssadvalvel eapvtftnyi lpvcvpdpsv
      421 vfetgmncwv tgwgspseqd slpkprtlqk lavpiigtpk cnllyskdae ssfqprtikd
      481 dmlcagfaeg kkdackgdsg gplvclvgqv wlqagviswg egcarrnrpg vyirltshhd
      541 wihriipelq fqragpggaq krdprnlqpl grnsvccpaa ravllvlaal ltll
//
LOCUS       XP_061009861             322 aa            linear   MAM 02-DEC-2023
DEFINITION  testisin-like [Dama dama].
ACCESSION   XP_061009861
VERSION     XP_061009861.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153878.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 12% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..322
                     /product="testisin-like"
                     /calculated_mol_wt=36060
     Region          53..292
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            53
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(93,145,246)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(240,265,267)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..322
                     /gene="LOC133063945"
                     /coded_by="XM_061153878.1:1..969"
                     /db_xref="GeneID:133063945"
ORIGIN      
        1 mrpqgaaqll alllvrieia eqafrdkdll lpgfqnssml swpcgqraip trivggkdsa
       61 lghwpwqgsl rlwgshfcga sllnrrwvls aahcfennqn pfhwsvqfge lsatpsiwnl
      121 qayynrynvd qiflspfylg apvydialvk lsssvtytky iqpicvvasi sefenrsdcw
      181 vtgwgdveee lslpypytlq evqvgiinst mcnhlfsmpd frtdiwgdmi cagdpqggkd
      241 scfgdsggpl vcekkglwyq vgvvswgvgc grpnrpgvyt nvsahykwir evlaknntcr
      301 ldpcllllll plfwalpflr la
//
LOCUS       XP_061009862             302 aa            linear   MAM 02-DEC-2023
DEFINITION  serine protease 33 [Dama dama].
ACCESSION   XP_061009862
VERSION     XP_061009862.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153879.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 16% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..302
                     /product="serine protease 33"
                     /calculated_mol_wt=31927
     Region          59..299
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            59
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(99,148,253)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(247,272,274)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..302
                     /gene="PRSS33"
                     /coded_by="XM_061153879.1:1..909"
                     /db_xref="GeneID:133063946"
ORIGIN      
        1 mstsgcvvcv trgagrhlva cvfhvsqtrn pvpsllpppv aagtlaseac gqprvssriv
       61 ggrdaragew pwqasiqhrg thvcggslia pqwvltaahc fprkalpaey rvrlgalhlg
      121 pssppallap vrrvllppdy sedgargdla llllrrpapl strvqpvclp epgarpppgt
      181 pcwvtgwgsl rpgvplpewr plqgvrvpll dartcdhlyh lgtnvprveh ivlpgslcag
      241 yvggqkdacq gdsggplvcm ksgrwvlvgv vswgkgcalp nrpgvytnva tyspwiqahl
      301 ni
//
LOCUS       XP_061009863             516 aa            linear   MAM 02-DEC-2023
DEFINITION  glycine-rich extracellular protein 1 [Dama dama].
ACCESSION   XP_061009863
VERSION     XP_061009863.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153880.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..516
                     /product="glycine-rich extracellular protein 1"
                     /calculated_mol_wt=48892
     CDS             1..516
                     /gene="GREP1"
                     /coded_by="XM_061153880.1:1..1551"
                     /db_xref="GeneID:133063947"
ORIGIN      
        1 msawafptal lllgltsesl qggvppsslg lgkgfgngrg lgaqpgppaq ngygtgiggg
       61 akprkpgvsp gfrngnglgv gtlpgaaaqp gygnalgaga fpglgaqpgf ggrngigvga
      121 frgagigggv kpqkpgpivg nglgagafpg agaqpglaap ngfgpgfggg gkpqkpgfgt
      181 rdgtqpglga gglkpqkpgp pakngygagf gggvntqkpg fgngnglgaq pgpaipqgyg
      241 agygngnglg arpgpaadng ygaglaagmk pqkpgfgngn glgvqpgpaa pvgdgpgvae
      301 amkpqkpvyr nglgagafpg qgaqpglggs vsplkpgymp lgngpqllpg lgvglkpqqp
      361 gygngnglga qpvptpalqw gpkpqeagyq lqngygpgag lgfggglrpq kiglgygngg
      421 lragvspear pqpgfpgadg flngqagglr gfpwpslgpw gaalkprygv ggtypevgsq
      481 pgpygqlrpe lgpgplggpe vkrgsngplg ngfggr
//
LOCUS       XP_061009864             258 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133063948 [Dama dama].
ACCESSION   XP_061009864
VERSION     XP_061009864.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153881.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 13% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..258
                     /product="uncharacterized protein LOC133063948"
                     /calculated_mol_wt=28074
     CDS             1..258
                     /gene="LOC133063948"
                     /coded_by="XM_061153881.1:1..777"
                     /db_xref="GeneID:133063948"
ORIGIN      
        1 megaasfaya rsprgpamlg gaqdlsgytv katvllnfae pktgyrsvrv scgraqtrkd
       61 pekleghpgp agwelprtgw psckparrgg vlapppggps arepphpevr prcaasspsp
      121 ietetipriw lrfsardpka eprsqaskdr qqkslqhrlv glgtsasfrf edsgslrspe
      181 qrnrgsrrpr sdrprwvlfr qaavaalgrs sgggllepwa wpwgrtprwl slgsrearrp
      241 lgwvmiglgd dvtccvcl
//
LOCUS       XP_061009865             318 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1F1 [Dama dama].
ACCESSION   XP_061009865
VERSION     XP_061009865.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153882.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..318
                     /product="olfactory receptor 1F1"
                     /calculated_mol_wt=35335
     Region          33..294
                     /region_name="7tmA_OR1_7-like"
                     /note="olfactory receptor families 1, 7, and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15918"
                     /db_xref="CDD:320584"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320584"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,252,255..256,258..259,262,
                     268..269,271..273,276,279..280)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320584"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320584"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320584"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320584"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320584"
     Region          269..294
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320584"
     CDS             1..318
                     /gene="LOC133063949"
                     /coded_by="XM_061153882.1:1..957"
                     /db_xref="GeneID:133063949"
ORIGIN      
        1 mgeanqsrvs eflllglsrq pqqqqllfll fltmylatvl gnllillais vdsrlhipmy
       61 fflcnlsfvd tcfssttvpk vlanhvlgsq tisfsgcltq myfvfmfvdi dnfllavmay
      121 drfvavchpl hysakmthql callvtgswi ianlnvllht llmarlsfca dnaiphffcd
      181 vtpllklscs dthlnevmil tegalimitp fvcilasyvl itcailrips tkgrwkafst
      241 cgshlavvsl fygtiiavyf nplsphssek dtaatvmytv vtpmlnpfiy slrnrdlkra
      301 lgkvvgrkmf svsgenqk
//
LOCUS       XP_061009867             324 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1F1-like [Dama dama].
ACCESSION   XP_061009867
VERSION     XP_061009867.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153884.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..324
                     /product="olfactory receptor 1F1-like"
                     /calculated_mol_wt=35707
     Region          45..306
                     /region_name="7tmA_OR1_7-like"
                     /note="olfactory receptor families 1, 7, and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15918"
                     /db_xref="CDD:320584"
     Region          71..97
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320584"
     Site            order(93,96..97,109..114,116..117,120,165,167..171,207,
                     210..212,214..216,218..219,264,267..268,270..271,274,
                     280..281,283..285,288,291..292)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320584"
     Region          109..139
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320584"
     Region          152..173
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320584"
     Region          207..237
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320584"
     Region          244..274
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320584"
     Region          281..306
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320584"
     CDS             1..324
                     /gene="LOC133063950"
                     /coded_by="XM_061153884.1:1..975"
                     /db_xref="GeneID:133063950"
ORIGIN      
        1 maistnlpqi qpirganqsr vseflllgls rqpqqqqllf llfltmylat vlgnllilla
       61 isvdsrlhvp myfflcnlsf vdtcfssttv pkvlanhvlg sqtisfsgcl tqmyflfefa
      121 dmdnfllavm aydrfvavch plhysakmth qlcallvtgs wvtaslnall htllmarlsf
      181 cadnaiphff cdvtpllkls csdthlnevm iltegalimi tpfvcilasy vlitcavlrv
      241 pstkgrwkaf stcgshlavv slfygtiiav yfnpssshss ekdtaatvmy tvvtpmlnpf
      301 iyslrnrdlk galqkvigrk acss
//
LOCUS       XP_061009868             329 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 597 [Dama dama].
ACCESSION   XP_061009868
VERSION     XP_061009868.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153885.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 19% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..329
                     /product="zinc finger protein 597"
                     /calculated_mol_wt=36426
     Region          170..192
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          172..192
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          200..220
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(205,207,209,211..212,215..216,219,233,235,239..240,
                     243..244,247,261,263,265,267..268,271..272,275)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          212..237
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          228..248
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(228,231,244,248)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          256..276
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..329
                     /gene="ZNF597"
                     /coded_by="XM_061153885.1:1..990"
                     /db_xref="GeneID:133063951"
ORIGIN      
        1 mlgktegnyi sqntraelrk ssrvdsvtrl sgqdcsfssl mcpevpvatg rkhyhhptpp
       61 hpqdgihtpy nrgpdnqqlh lesmgleela lekcslavpl icypeksseh gagnferkis
      121 ggtpactkrf rsllvtienh tplielaqsl gtralpeilp fpeegtkksy kcpecdqsfs
      181 hssclvlhqk thagkkkckc ddcrkifnhr snlrahkiih tgekpykcaq cggsfrrpsh
      241 lsqhrkahpk ekihrcgicg rgftrlrgls qhqkthtatk asnkyvgqkt nlalpeekhg
      301 saaqqpcspg rkcfgqpsyp cpgeatrti
//
LOCUS       XP_061009869            1861 aa            linear   MAM 02-DEC-2023
DEFINITION  structure-specific endonuclease subunit SLX4 [Dama dama].
ACCESSION   XP_061009869
VERSION     XP_061009869.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153886.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1861
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1861
                     /product="structure-specific endonuclease subunit SLX4"
                     /calculated_mol_wt=201281
     Region          724..838
                     /region_name="BTB_POZ_BTBD12_SLX4"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in
                     Structure-specific endonuclease subunit SLX4; cd18288"
                     /db_xref="CDD:349597"
     Region          <864..1287
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          <1082..1522
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1569..1618
                     /region_name="SAP_SLX4"
                     /note="SAP domain of structure-specific endonuclease
                     subunit SLX4 and similar proteins; cd22999"
                     /db_xref="CDD:439380"
     Site            order(1571,1573..1576,1578,1592..1597,1607,1610..1611,
                     1613..1618)
                     /site_type="other"
                     /note="MUS81 interaction site [polypeptide binding]"
                     /db_xref="CDD:439380"
     Region          1767..1824
                     /region_name="Slx4"
                     /note="Slx4 endonuclease; pfam09494"
                     /db_xref="CDD:430644"
     CDS             1..1861
                     /gene="SLX4"
                     /coded_by="XM_061153886.1:1..5586"
                     /db_xref="GeneID:133063952"
ORIGIN      
        1 myslseastg qqtlsdvnfn keaarnhnea ssvneawpgs hsgslshlct rphidphfsq
       61 dqpeslqtcq mmdesdddfq elcasffqrv kkngpkevsk ekktqkasng tqirskpkrt
      121 kptasksktl qgpterktrp grqvprtqkh gapkrpetep appenteggv htsavlqdsv
      181 rstqtgnqse plpertpevi ctilnqgsen flkakattds lsqpppscli atvpspskpr
      241 aaelvlqrmq qfkradperl krasegcsle aapeenvpkg pqdvmavngh ilrecqgsap
      301 atsgcgpklp ttesdtaval alqqelgqeq vsapddslee kglffcqicq knlsamnvtr
      361 rqqhmnrcld eaekalrfpm ppipecpicg kpfltlksri shlkqcavkm evgpqlllqa
      421 vrlqtaqpvg tsgtpapsls dgagclkrkg attkkeprkr rkvtgpeaps edllvamals
      481 rsetereavp aalslgnafa ertrlgaekk trkkkapasp pqllvqdpet tgrqiedrva
      541 qllseevels stpplpasri qeeelargsw alrppggaqn llweasaltg agalesfyta
      601 slvpplvpqr pakgltqepm rlprppkppg lsvgtppsah gahsvghslr spvpstsqre
      661 rqalqdllel ageglpaspc srdlagsega agmdlslggl pltgfvlpak ekyleeggra
      721 slalgllvad fsamvnnphl sdiqfqtdsg evlyahkfvl yarcpllmqh vnsegflaee
      781 dgdlrhqrvl lsdvsaeaaq aflhylyaad svltpqlapd lrslaqrfgv selvhlceqv
      841 pivmdaeggq qkeqededad grvetfqell rsmwlgeeeg aeallkpegr eedrekvnee
      901 emkeiyefaa tqrkrlqgek apepkeegnl lredgpvsge iltskqdkeq penagqless
      961 gqgrdetpak wgntrpstll ppsnqalnge ekaeaskgvp alprssspaq graerqenap
     1021 lcsvdddndq qpfsspqagy pelsrvmsnq eegnrtiqer evegfhpsah qqahpsrscf
     1081 fppqphqgrs prqprpqphs psdlplqgta ssvasqnssp kpkrarrlps sredpgqkdk
     1141 ecssplerrg kgvlifpeks ppmdltwsgp grqssrpets pcsvnredev illldsdeel
     1201 eleqtkaksf lnsptedkkv levsakssel fsiidldaeq eppqsqtgsq aplpqegrlg
     1261 asaeedsttt dtswlvpatp lagrscdcss qtqitglrar ppadplsppt prallenrde
     1321 peatskfsvi vpqtssprlg pttpgssdgr rqvcrsassp rrrrlpcasp laprpilggl
     1381 adlpgqlprc ppppqslvar apvsevveve dsedeqeaas qqasssplld gdppipaedw
     1441 cwhveplspi pidhlnlert gplstsspss raegapdsrd crspallgtt pvrgshtgqr
     1501 ksrekssgan spgshrqsfl nsalwddwne edqrssealp lpqtpradga qsshelqtpe
     1561 gadrknlppk vpitpmprys imetpvlkke ldrfgvrplp krqmvlklke ifqythqtle
     1621 sdsedegqss qlplaaprsq tyttqtskas raaghtqlea ppgcipqrsk gpaktkgpqh
     1681 hkqqpggsis alsvspakee pldpggdaqf pasqesmats vdsgdsscss qsssyefgaa
     1741 lesageeeag eeavstsqga iqavateeav rryirsqpal yrkvllyqpl elaelqaelk
     1801 qqgirvasgk lldfldtqci tfttaatrkk lgrkrrqptg kkrgragrpa prspvsaags
     1861 l
//
LOCUS       XP_061009870             466 aa            linear   MAM 02-DEC-2023
DEFINITION  sarcalumenin [Dama dama].
ACCESSION   XP_061009870
VERSION     XP_061009870.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153887.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 17% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..466
                     /product="sarcalumenin"
                     /calculated_mol_wt=46163
     Region          <184..>338
                     /region_name="2A1904"
                     /note="K+-dependent Na+/Ca+ exchanger; TIGR00927"
                     /db_xref="CDD:273344"
     CDS             1..466
                     /gene="SRL"
                     /coded_by="XM_061153887.1:1..1401"
                     /db_xref="GeneID:133063953"
ORIGIN      
        1 mgvplalplk plalrrgspr kelakayprg sagrarlhvp araveegleg rrpasippge
       61 agkagagler scekqsacqp ldtdpscsdh lelqvsasgg tedvgnllen hfsagdasle
      121 ekeralrsea apgetrpllh pteggedgss ektaadglgs gpdpdpdpea slsnasases
      181 aapgehvgpv aedagppgaa salppggege pgeeagarel ssgegpgqea egpagsgevp
      241 eeaadalged paqgaaagsp etedagdsps pevetggegs pgpgqepevp dgaadvdaea
      301 aqrtedqaep sfssaaaaed aaareeeggs rehrpaegip aehpdeasse eeggeeseee
      361 sgdeeesgdg asseeaggas eeeeaekeag egahaaagsa spgeegspee spegadaqep
      421 keegpqgrgr praahlpppa ghldgggcfg hsggcslpgg lkrrrm
//
LOCUS       XP_061009871            1078 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C16orf96 homolog [Dama dama].
ACCESSION   XP_061009871
VERSION     XP_061009871.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153888.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 21% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1078
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1078
                     /product="uncharacterized protein C16orf96 homolog"
                     /calculated_mol_wt=118295
     Region          656..844
                     /region_name="DUF4795"
                     /note="Domain of unknown function (DUF4795); pfam16043"
                     /db_xref="CDD:464990"
     CDS             1..1078
                     /gene="C10H16orf96"
                     /coded_by="XM_061153888.1:1..3237"
                     /db_xref="GeneID:133063954"
ORIGIN      
        1 msfslkfsel vniaipqcgv vnfkalhfll hgilehihma elekdlsgde dflqasvsvt
       61 fppregdtqp tlsplkrlgn ifdhlvsrvd mlesqlaalr dvpstaqlle ssqgtrqpaq
      121 elwnlirlrk kvegneeava ksirtlqdll tdiyalkvsv etlrnevaml kdvfekispq
      181 ridafsedlr gqnrkmsvlq revtslqskv taipkpedlv lwsslheamf ipgaapqllg
      241 dsdlwrisel asettvaqta sdhgggglrh fseaiqhprf letiwqyqsl glglglglgl
      301 rwdpglrldl glglrsdpgl hldlglhpkl glrsdpgvll glgfhpklgl hpnlglssdp
      361 glllglglrl dpglhldvgl hpnlglrsdp gqplnwnlpr afnphhqdpg lfrglrappp
      421 amelgsgwpr lqrsmyrqgd msklsalsek eeyssmergg prdralraev ppgglpkgfr
      481 savqqmkpsa altaaaaasy tsdvaasaar aakaaakltk dapatklatv atatasagpl
      541 gvlaefldag pshgafpgde medlleveye dllspsfssv fvppntalsq amlaakhatt
      601 pedkkkavry smshiaqmpv rhdtlkeefa qlssnlqqrm tylanmgass klgstvdilq
      661 ekignlqksr mkeeelervw ghqiemikdh hvvldravnr lqirldelkv vyaqlrnlem
      721 ykadrnemeq elkekadkss lagkasradl dtvamqlnel iqgmlfrvva neddwkkave
      781 qldkdvrtkl vpsdlddlkk dmdevwkvvr kllteglhfd pdnaagfrrk lfervkcisc
      841 drpvemmtsp qlitvrnthl lpglrpasan syeylqrqqm reqqqlqklq nlgapegsld
      901 slgppqdwgd gprndanlkf kpyglstlyp ygdpelldyd saevdllgvd gilykgrmtg
      961 kdrarpltgt ekevaavkvp hpparssyeg arpstlfgai ysalpprasm gsaasgplpt
     1021 mparppsppp vlllppltps lqdpqpvpgs arhprflrle sraslqsske psnptask
//
LOCUS       XP_061009872             420 aa            linear   MAM 02-DEC-2023
DEFINITION  dynein axonemal assembly factor 8 [Dama dama].
ACCESSION   XP_061009872
VERSION     XP_061009872.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153889.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..420
                     /product="dynein axonemal assembly factor 8"
                     /calculated_mol_wt=45661
     Region          14..402
                     /region_name="DAAP1"
                     /note="Dynein axonemal-associated protein 1; pfam15773"
                     /db_xref="CDD:464861"
     CDS             1..420
                     /gene="DNAAF8"
                     /coded_by="XM_061153889.1:170..1432"
                     /db_xref="GeneID:133063955"
ORIGIN      
        1 mashdedrrp slpspwdail eavkdqlpsl dsdssssdhe deelfifqrn qtalipdlse
       61 eladdpagaw itssgsppep avvpvesave pwgewnawpr pqesaplegr apgksssllr
      121 msaeippqql ddaggtlnps gsqsprqgpq geatcsplea glqteppgaa sraqegsdaa
      181 nrralrrerr kmiekdilhk vtwdgrdpac sdtsggkeka cdavevpsee ppghlpvlsl
      241 qeleewdldq vllsltgree drgdgapraa wwaadrlqgq dhtapstqer lmerlsllcs
      301 rqsraaasar rvpadmpwea wpqeagsrca srelgfqala qdarlrnpve pptifidlrp
      361 tktsdqrpse sssssdseea eeetaaqrdt qgparlrtgt pqlglccspl lefnqniftr
//
LOCUS       XP_061009873             215 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133063956 [Dama dama].
ACCESSION   XP_061009873
VERSION     XP_061009873.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153890.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 18% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..215
                     /product="uncharacterized protein LOC133063956"
                     /calculated_mol_wt=23063
     CDS             1..215
                     /gene="LOC133063956"
                     /coded_by="XM_061153890.1:1..648"
                     /db_xref="GeneID:133063956"
ORIGIN      
        1 mqnstkdqgv hrrralekwt qqgaaerqew saeepsseps ranppsprse arsptdrplg
       61 segcwvlplp qvqaepsgam aspssspedt gklrgrdgrq rreaedappe ekrlrlgleg
      121 gsaaseeged aprlgreetg tqtgvedggd lpslpyslve gqdytsehsa clssannsph
      181 dsvsaslass kteetawrth asgtysfpdq tqhsr
//
LOCUS       XP_061009875             128 aa            linear   MAM 02-DEC-2023
DEFINITION  cytochrome c-like [Dama dama].
ACCESSION   XP_061009875
VERSION     XP_061009875.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153892.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 17% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..128
                     /product="cytochrome c-like"
                     /calculated_mol_wt=14228
     Region          25..123
                     /region_name="Cyc7"
                     /note="Cytochrome c2 [Energy production and conversion];
                     COG3474"
                     /db_xref="CDD:442697"
     CDS             1..128
                     /gene="LOC133063957"
                     /coded_by="XM_061153892.1:1..387"
                     /db_xref="GeneID:133063957"
ORIGIN      
        1 mrqcqnqdpd palhiahrks dlklgdvekg kkifvqkcaq chtvekggkh ktgpnlhglf
       61 grktgqaagf cytdanknkg itwgeetlme ylenpkkyip gtkmifagik kkgeredlia
      121 ylkkatne
//
LOCUS       XP_061009876            3807 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133063958 [Dama dama].
ACCESSION   XP_061009876
VERSION     XP_061009876.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153893.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 11% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3807
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3807
                     /product="uncharacterized protein LOC133063958"
                     /calculated_mol_wt=415637
     Region          50..587
                     /region_name="Vitellogenin_N"
                     /note="Lipoprotein amino terminal region; pfam01347"
                     /db_xref="CDD:460170"
     Region          620..911
                     /region_name="Vit_open_b-sht"
                     /note="Vitellinogen, open beta-sheet; pfam09172"
                     /db_xref="CDD:462702"
     Region          <3079..3480
                     /region_name="COG3903"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443109"
     Region          3550..3698
                     /region_name="VWD"
                     /note="von Willebrand factor (vWF) type D domain;
                     smart00216"
                     /db_xref="CDD:214566"
     Region          3739..3794
                     /region_name="C8"
                     /note="This domain contains 8 conserved cysteine residues;
                     smart00832"
                     /db_xref="CDD:214843"
     CDS             1..3807
                     /gene="LOC133063958"
                     /coded_by="XM_061153893.1:1..11424"
                     /db_xref="GeneID:133063958"
ORIGIN      
        1 mpaplgflgl vlfwvlvpat sekmpdslvg qaascmtsct gsadphlpvg tryiyhfstn
       61 tstslqgaqv egsglglqgl vtldvlgpcq malqlqhfql tsilgskvev lkeseslsav
      121 lgreplrfvl qagrvvrlcp rraeprwaln vkravlsllq ghpgardpqt veevdilgrc
      181 patyqqfgsr lhktkdltrc slrraraslr sqalpaaees glasrltcvq slqagvlrda
      241 sctqldtvgp lsreanaalm wtlsslsllr evpqdpavte ppasdsdagd ltlssllyew
      301 eetpsqatva tgaasvrklc laqatsfeat elfltlvtel rglsadelme lwglsfkcrd
      361 nwkplvdalp scgteacvgl maelivsgev eadeteawlw slafipeptd amvrallpll
      421 qtpgasssaf lgisalvhnl cvsldgpceq lpgvgslvri lgdavganct fqepsdadql
      481 lfvlkaigna gwaataltpr lstyaslgsc ppeirlgaiq afrrvpcsad rsmlynlyqn
      541 agedseirin aylalmrcpg eevfaqvqrt qageqstqvg sfvwshllql letddplkqt
      601 lreaipedtv srefhpemwk hssysdatfr sasgslganl egtllfspas flprsatanl
      661 tihalghafn vlelglrlen aeemarrlfg lksfwgqege rqaqaekppe tepgptpqpa
      721 dpacpgersr kmrdlqqkva rrrrerqalk cqlsmkvfgh elssvncgam gshvkrqsln
      781 laelaikllk gqevqvnrrl nlameeltfp tmsglparlt lnvsaaisir vrgtadfqrh
      841 sdfsvngyvk psallqisaq mgtvgalgqa glrwvtgvrg tasldggiqa rkgqdlrvhl
      901 ntpeevvell rfrsqlylvt gddvrslshv pspseaqsct skeashtwgw qlcaemlwpa
      961 pdqpyllwvp vlaamtlkkq drglqqylle aaytlhpqkd cwlpqeasah ifmgtpgsev
     1021 prdvgvdvsy swpqgkfrlk llhpkkriel dgkietvqra rmghlelild erdvyyikgr
     1081 snlwpavgge aqrfeaqlev rlvtsgspvv lagnlsrqag srlafsvslr nllgdeahvs
     1141 allekevkdg lqvvslgvel fvpelmglra lgqlqrwghl wtsylrikyg lrgqakqlaq
     1201 ecstsqklwa egsseaaykl elnhklhctq ipafshkvql rheevsghlh weleasygkh
     1261 wddirnrrrl rilqtfqnds gpalsnhfle fllqvpekqv dyrmhlhhls lrhphvetsa
     1321 hlkvqynrrl pfvaglqwkd tsraalwrwe galnlnspwl mvsmahrlyw pnratfqavl
     1381 eltlgkawtl knlvinvacr gqglqrhgki hvytpattyl rvstvtalaq slfstrseie
     1441 sawstavqse ihaensrdrk ilrcwlkgpq relnltaayr hteqprkshv sltalgtsar
     1501 ghpeglqleg ileelvrdrs lyqkqgtfsl rhpwtvpflp qhillqetft adrqhqrysl
     1561 etrvvldaqe etlqtvvlgy qaghpyvcag lthpyddrai prsldgcvvs wnrhlaknrg
     1621 veatlrvnqk vllhlkalhh nrsrhcevwh nlaldmthsf qlrfpqalnv dgdivfrqrh
     1681 egafdcgvda ratvnhnvts qvlvqlngsd shsvvsfqlr rprgpmfppy lqvqaavrhy
     1741 recsldgsls vhvsgeelil leasasqdsr rntrgwgvnv llhqevlrap ravqlqlssk
     1801 iapariwlfs kalldqntvq lflkaseerr ggrvltlrsq aqhtvaawaa lprlltlvgv
     1861 lkqkevlreg tikvtadsam lglllrdkhe ragnstsvhs vtcilaqnss qalpgelqlr
     1921 grlqaqtgsl ggqaslradt aslalggvct wgpghgqlsg slshnisals eaglsseagm
     1981 llshthvasn fsvrvmlrss ggqldaalgl egvatstsgs qlraslrhtv pglgrwglpf
     2041 svggrghlqs sgpsleaglv vsvdgeelgg aqersgagdr reltrglhpg lvrlqnpavl
     2101 tlngsvlvhs fgaslvaqvs sgdtfarahv hsacghrahl dtglqhawpp lqalgvppsn
     2161 hirvsmrgde apqaqleval glctltargd frseasathn wtlalvnhcp lleatgipra
     2221 lrsegslswg pcefdlttdf hsdrgdaylq lartcgpqtl vlghlthslp llgrlglppr
     2281 saisltvqpg ptrysslslq mgpcrlqgal eqhaenrstw tlatepgcpl leqdlglpag
     2341 tqfsdsrqal ggeaeasgvl aaasqtaslt lavtlhpsea tlraklrptl palhalppet
     2401 sltvqcgwea ghrlrlelhs gacelqgsge lqldrrlqwr vvaessceal qvrvrgesgs
     2461 vkkpyfhffq hfqalgvpgr vdgsgyivvn stavdaqvlv tmdanmlrgl lvlsttetqq
     2521 evnlllthnl pqpnplalpa qillyltner lgpsyrhslr vgvdgkevse eltftqwpeh
     2581 vsldcrlqhn mpalrtlwve drvalqvsad vdssctgfen sgrisagsts lnysmscrhh
     2641 dgrlefsgws ehnswalrqa gfpgearlga elqmqktqtq acvvlqggdg gisvdaaalv
     2701 arpvngplel vvnvshtapl lrrlglpfas qlmfrelwek eemhaslklt cdsqtslvln
     2761 vhghnqalsk elrlsgqhhl pvllgrcpsr asasaklrys eggaegtfvl mveehhfhmg
     2821 agftaakntv tniikleqtf pqfhalpgel vlqtsyerar dtqvlhhvvl wdgqglalng
     2881 slsgpflkpa gtrglqvelt hplplplprh crfrltsehs trrhqddlvv gwdgkdqval
     2941 ssslrlgkgk laahlalahp fglswrraea sglaesrggr qswqvqlawn ggqplalqlt
     3001 wanrssaqsa swdgcvaasp gqlqdtwglg afracgaltq tpavfsewld lswdgrlvqq
     3061 nltyerrqps lpdkihaeam lehilgapcp tqsfrgdvet drahwlrhsl qlglchlpra
     3121 lavsgehtlg sgelllhsrc qlglapdpeh glhlslmlrn hsrprthdys gelelrgpka
     3181 qwlgllgrvs ssasrslvqm egsvadgdek vrlsvsrapn clqasvahee grqeesvllr
     3241 acahrraaev eallrdrgqp vqplvrltlq aasqslrlta rgcqgtllgh vesrvaalgs
     3301 qvqagleeri hsldayvrrf qrlvqpagal dglaspllrl cqvglgavrd sgravaalwg
     3361 lspagralth qmplslerlq agleqlrkel erplatlkda ylevtvqpld dvwreraeaa
     3421 lrqlqawvsg tpgtwgsgpl gaaleatgga lelaahqmls wadaalsral rrlcrplldm
     3481 ysfsardcsv vvtlpmlpag depldvacvt shlveelllq plralyrtsm laeyyrlkrg
     3541 llgapsgyha vvagaryvvt fdgrvwgigd hcgslllaqd fahdtfsltl nragsgltsl
     3601 tvgldhtila lypslktyrl ysnslpgesc ldgdlppakt gkddprielt sedgvsitcd
     3661 vraglcgltl svwqhglsag llgtndneas neimlpdgtl assleefaqa wqlagdcrav
     3721 ektrpvcleq sptcqaffhd phsslascfg vvdptpflsl cirdtcgtqe hqpactlaav
     3781 yihlcargfv pvdpppqcge wtrqqal
//
LOCUS       XP_061009877             142 aa            linear   MAM 02-DEC-2023
DEFINITION  hemoglobin subunit zeta [Dama dama].
ACCESSION   XP_061009877
VERSION     XP_061009877.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153894.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..142
                     /product="hemoglobin subunit zeta"
                     /calculated_mol_wt=15482
     Region          3..142
                     /region_name="Hb-alpha-like"
                     /note="Hemoglobin alpha, zeta, mu, theta, and related Hb
                     subunits; cd08927"
                     /db_xref="CDD:381263"
     Site            order(32,35..36,42..43,93,95..96,104,108,111..112,
                     118..120,123..124,127,141..142)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:381263"
     Site            order(33,43..44,59,62..63,66,84,88,98..99,102,137)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:381263"
     CDS             1..142
                     /gene="HBZ"
                     /coded_by="XM_061153894.1:1..429"
                     /db_xref="GeneID:133063960"
ORIGIN      
        1 msltraertv ivsmwskist qadaigtetl erlfscypqa ktyfphfdlh tgsaqlrahg
       61 skvvaavgda vksidnvasa lsklselhay vlrvdpvnfk flshcllvtl ashfpadfta
      121 dahaawdkfl slvsgvltek yr
//
LOCUS       XP_061009878             142 aa            linear   MAM 02-DEC-2023
DEFINITION  hemoglobin subunit alpha [Dama dama].
ACCESSION   XP_061009878
VERSION     XP_061009878.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153895.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..142
                     /product="hemoglobin subunit alpha"
                     /calculated_mol_wt=15142
     Region          3..142
                     /region_name="Hb-alpha-like"
                     /note="Hemoglobin alpha, zeta, mu, theta, and related Hb
                     subunits; cd08927"
                     /db_xref="CDD:381263"
     Site            order(32,35..36,42..43,93,95..96,104,108,111..112,
                     118..120,123..124,127,141..142)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:381263"
     Site            order(33,43..44,59,62..63,66,84,88,98..99,102,137)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:381263"
     CDS             1..142
                     /gene="LOC133063962"
                     /coded_by="XM_061153895.1:49..477"
                     /db_xref="GeneID:133063962"
ORIGIN      
        1 mvlsatdksn vkaawgkvgg napaygaeal ermflsfptt ktyfphfdls hgsaqvkahg
       61 ekvanaltka vghlddlpgt lsdlsdlhah klrvdpvnfk llshtllvtl aahlpndftp
      121 avhasldkfl anvstvltsk yr
//
LOCUS       XP_061009880             142 aa            linear   MAM 02-DEC-2023
DEFINITION  hemoglobin subunit alpha [Dama dama].
ACCESSION   XP_061009880
VERSION     XP_061009880.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153897.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..142
                     /product="hemoglobin subunit alpha"
                     /calculated_mol_wt=15142
     Region          3..142
                     /region_name="Hb-alpha-like"
                     /note="Hemoglobin alpha, zeta, mu, theta, and related Hb
                     subunits; cd08927"
                     /db_xref="CDD:381263"
     Site            order(32,35..36,42..43,93,95..96,104,108,111..112,
                     118..120,123..124,127,141..142)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:381263"
     Site            order(33,43..44,59,62..63,66,84,88,98..99,102,137)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:381263"
     CDS             1..142
                     /gene="LOC133063963"
                     /coded_by="XM_061153897.1:49..477"
                     /db_xref="GeneID:133063963"
ORIGIN      
        1 mvlsatdksn vkaawgkvgg napaygaeal ermflsfptt ktyfphfdls hgsaqvkahg
       61 ekvanaltka vghlddlpgt lsdlsdlhah klrvdpvnfk llshtllvtl aahlpndftp
      121 avhasldkfl anvstvltsk yr
//
LOCUS       XP_061009881             465 aa            linear   MAM 02-DEC-2023
DEFINITION  regulator of G-protein signaling 11 [Dama dama].
ACCESSION   XP_061009881
VERSION     XP_061009881.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153898.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..465
                     /product="regulator of G-protein signaling 11"
                     /calculated_mol_wt=52799
     Region          24..111
                     /region_name="DEP_RGS7-like"
                     /note="DEP (Dishevelled, Egl-10, and Pleckstrin) domain
                     found in RGS (regulator of G-protein signaling) proteins
                     of the subfamily R7. This subgroup contains RGS7, RGS6,
                     RGS9 and RGS11. They share a common domain architecture,
                     containing, beside the RGS domain; cd04450"
                     /db_xref="CDD:239897"
     Region          108..207
                     /region_name="RGS_DHEX"
                     /note="Regulator of G-protein signalling DHEX domain;
                     pfam18148"
                     /db_xref="CDD:375589"
     Region          223..284
                     /region_name="GGL"
                     /note="G protein gamma subunit-like motifs; smart00224"
                     /db_xref="CDD:128520"
     Site            order(223,226,230,233,237,242,244,247..248,251..252,255,
                     264..265,274)
                     /site_type="other"
                     /note="beta subunit binding site [polypeptide binding]"
                     /db_xref="CDD:238024"
     Region          295..420
                     /region_name="RGS"
                     /note="Regulator of G protein signaling (RGS) domain
                     superfamily; cl02565"
                     /db_xref="CDD:470619"
     CDS             1..465
                     /gene="RGS11"
                     /coded_by="XM_061153898.1:9..1406"
                     /db_xref="GeneID:133063964"
ORIGIN      
        1 maagpaplgg qppaqrphls kmermvvtmq dpdqgvtmrs qrllvtviph avngsdivew
       61 liqkysiaed ealhlgsllv qhgylyplre prrlelrpde tpyrfqtpyf wtstlwpaae
      121 ldyaiylakk nirkqgalvd hekehyhqlh rkinhawdlv mmqareqlra akqrrkgdrl
      181 viacqeqtyw lvnrpppgap svleqgpgrg pcmagrmlkt ktvdfyrrev eclrralgra
      241 rvksstclea ylkfssqhgp hdpimsgclp snpwvtddda ywamnapsva mptrlrveqw
      301 afsfrelled pvgrahfmdf lgkefsaenl sfweaceelr hggqarvpal vdavyqqfla
      361 pgaarwvnid srtmeqtlag lsqphrhvld daqrhiyllm kkdsyprflk sdlyrdllae
      421 avvpletkrr vfpfsrkprh sspspallpa stsgepvggd gdget
//
LOCUS       XP_061009882             225 aa            linear   MAM 02-DEC-2023
DEFINITION  rho GDP-dissociation inhibitor 3 [Dama dama].
ACCESSION   XP_061009882
VERSION     XP_061009882.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153899.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..225
                     /product="rho GDP-dissociation inhibitor 3"
                     /calculated_mol_wt=24848
     Region          38..219
                     /region_name="Rho_GDI"
                     /note="RHO protein GDP dissociation inhibitor; pfam02115"
                     /db_xref="CDD:460449"
     CDS             1..225
                     /gene="ARHGDIG"
                     /coded_by="XM_061153899.1:34..711"
                     /db_xref="GeneID:133063965"
ORIGIN      
        1 mlgldacelg aqllellrla lcarvlltdk eggqlppeea ldeavpeyra pgkkslleiq
       61 qldpddeslv kykrallgpv ppavdpslpn vqvtrltlis eqapgpiimd ltgelaalkn
      121 qvfvlkegvd ykvkitfkvn keivsglkcl hhtyrhglrv dkavymvgsy gpsaqeyefv
      181 tpveeaprga lvrgayvvts fftdddrtah lswewglhvc qdwer
//
LOCUS       XP_061009883             528 aa            linear   MAM 02-DEC-2023
DEFINITION  protein disulfide-isomerase A2 [Dama dama].
ACCESSION   XP_061009883
VERSION     XP_061009883.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153900.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..528
                     /product="protein disulfide-isomerase A2"
                     /calculated_mol_wt=58743
     Region          46..507
                     /region_name="ER_PDI_fam"
                     /note="protein disulfide isomerase, eukaryotic; TIGR01130"
                     /db_xref="CDD:273457"
     CDS             1..528
                     /gene="PDIA2"
                     /coded_by="XM_061153900.1:1..1587"
                     /db_xref="GeneID:133063966"
ORIGIN      
        1 mdgqllpvll lllgasglwg qgpgpggple eppeeqppee eppeedgvlv lsrhtlgqal
       61 qehpallvef yapwcghcra lapeyskaaa llaaesarar lakvdgpaep elaeefavte
      121 yptlkffrdg nrthpeeytg preaegiaew lrrrvgpsar rleqeedaha lmdardvvvv
      181 gffqdlqdrd vatflglaqd aldmtfgltd rpqlfqkfgl tkdtvvlfkk fdegradfpv
      241 dkelgldqgd lsrfllthsm rlvteynset sskifearil nhlllfinqt ldahrellag
      301 freaappfrg qvlfvvvdvn adndhvlqyf gleareaptl rfinvettkk ympepgalvt
      361 aaavtdfcrm vlsggvkpyr lsqevppdwd qrpvktlvgk nfeqvafdet knvfikfyap
      421 wcthckemap aweelaekyk dhediviael dataneleaf pvhgfptlky fpagpgrkvi
      481 dykgardlet fskfldsgge lpteepaevp gaafpekpgn ateprdel
//
LOCUS       XP_061009884             576 aa            linear   MAM 02-DEC-2023
DEFINITION  proline-rich protein 35 [Dama dama].
ACCESSION   XP_061009884
VERSION     XP_061009884.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153901.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..576
                     /product="proline-rich protein 35"
                     /calculated_mol_wt=59847
     Region          17..70
                     /region_name="zf-C2H2_7"
                     /note="Zinc-finger; pfam15269"
                     /db_xref="CDD:259402"
     Region          <80..369
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..576
                     /gene="PRR35"
                     /coded_by="XM_061153901.1:1..1731"
                     /db_xref="GeneID:133063967"
ORIGIN      
        1 msreasscrl gpgararark pkkphyiprp wgkpynykcf qcpftcleks hlynhmkysl
       61 ckdslsllld spdwacrrap atprhpaatp grpadpsapa dpgtrprgar lldtpttpnl
      121 dltaddilsl rrrvgdpqlg aegsspgtpp pqardmqkga glggllaeaw kpgsgggrrs
      181 aavvgagasg petsvpcypp pssgelpeaq slhlsllgvn yplgpslfsy lgpslaaaah
      241 vpllasaspl lppaaafptp qpperptlip rlyypllleh slglpagkta lakppmpprg
      301 ppgalvpgll kvpvpglggp wprsalrdpg qeeqlgraaq sdpkrklalg aqpeplkvpc
      361 srasisaqss lrtgpsamlw pedkelrdle tagpaaslpp qplglalggp ghmgedltra
      421 lgdcaraeqr lgqlapaggl aprplreqlg kirrelltih qalaravrpp dapldlsvkr
      481 aptkahevpa gpwaqpelgp tlargtpepr gllaapplts httkceadss vpppalplqa
      541 pedpvipgsw gahagaggsw lpeavpglqs ppgaev
//
LOCUS       XP_061009885             213 aa            linear   MAM 02-DEC-2023
DEFINITION  methyltransferase-like 26 isoform X1 [Dama dama].
ACCESSION   XP_061009885
VERSION     XP_061009885.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153902.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..213
                     /product="methyltransferase-like 26 isoform X1"
                     /calculated_mol_wt=22603
     Region          4..>153
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     CDS             1..213
                     /gene="METTL26"
                     /coded_by="XM_061153902.1:147..788"
                     /db_xref="GeneID:133063968"
ORIGIN      
        1 mlvaeaaern kepilqvlrq yvdsaqrgvr vlevasgsgq htahfarafp haewqpsdvd
       61 qrcldsilat tqahglpnvk apmyldvtwd wkqwggilpq sldlllcinl shisplscte
      121 glfraaghll kpkavlityg eprmgatghl psqgpgpgqr pasgedggha sqqqvpnfpe
      181 tvtpsstmpv flvkasatlg qtagcdpaqt gds
//
LOCUS       XP_061009886             204 aa            linear   MAM 02-DEC-2023
DEFINITION  methyltransferase-like 26 isoform X2 [Dama dama].
ACCESSION   XP_061009886
VERSION     XP_061009886.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153903.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..204
                     /product="methyltransferase-like 26 isoform X2"
                     /calculated_mol_wt=22539
     Region          4..203
                     /region_name="DUF938"
                     /note="Protein of unknown function (DUF938); pfam06080"
                     /db_xref="CDD:253548"
     CDS             1..204
                     /gene="METTL26"
                     /coded_by="XM_061153903.1:147..761"
                     /db_xref="GeneID:133063968"
ORIGIN      
        1 mlvaeaaern kepilqvlrq yvdsaqrgvr vlevasgsgq htahfarafp haewqpsdvd
       61 qrcldsilat tqahglpnvk apmyldvtwd wkqwggilpq sldlllcinl shisplscte
      121 glfraaghll kpkavlityg ayavngkisp qsnvdfdltl rcrnpewglr dtsllkdlgq
      181 asglllermv dmpannkcli frkq
//
LOCUS       XP_061009887             127 aa            linear   MAM 02-DEC-2023
DEFINITION  methyltransferase-like 26 isoform X3 [Dama dama].
ACCESSION   XP_061009887
VERSION     XP_061009887.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153904.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..127
                     /product="methyltransferase-like 26 isoform X3"
                     /calculated_mol_wt=14088
     Region          4..126
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     CDS             1..127
                     /gene="METTL26"
                     /coded_by="XM_061153904.1:147..530"
                     /db_xref="GeneID:133063968"
ORIGIN      
        1 mlvaeaaern kepilqvlrq yvdsaqrgvr vlevasgsgq htahfarafp haewqpsdvd
       61 qrcldracse qqdtcsnprl clspmgnpew glrdtsllkd lgqasgllle rmvdmpannk
      121 clifrkq
//
LOCUS       XP_061009889             293 aa            linear   MAM 02-DEC-2023
DEFINITION  meteorin [Dama dama].
ACCESSION   XP_061009889
VERSION     XP_061009889.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153906.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..293
                     /product="meteorin"
                     /calculated_mol_wt=30817
     CDS             1..293
                     /gene="METRN"
                     /coded_by="XM_061153906.1:65..946"
                     /db_xref="GeneID:133063969"
ORIGIN      
        1 mplpallcal cfcflaaaar agysedrcsw rgsgltqepg svgqlalaca egeiewlypa
       61 galrltlggs epgaqpgivc lrparpfaga qvfaeragga lelllaegpg pgpagarcah
      121 wgprerralf lqatphpdls rrvasfsfel redgrpelpp qarslgadaa crpcsdaefl
      181 lavctsdfvi ygtilgvahd telqesvitv aaarvlrqtl pvfrvggpgg qgqasirtpl
      241 hcgvhpgpgt flfmgwsrfg eawlgcaprl qefsrayaaa hadhlhpcev vld
//
LOCUS       XP_061009890             403 aa            linear   MAM 02-DEC-2023
DEFINITION  mesothelin [Dama dama].
ACCESSION   XP_061009890
VERSION     XP_061009890.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153907.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..403
                     /product="mesothelin"
                     /calculated_mol_wt=44054
     Region          <50..402
                     /region_name="Mesothelin"
                     /note="Pre-pro-megakaryocyte potentiating factor precursor
                     (Mesothelin); pfam06060"
                     /db_xref="CDD:368727"
     CDS             1..403
                     /gene="MSLN"
                     /coded_by="XM_061153907.1:2..1213"
                     /db_xref="GeneID:133063970"
ORIGIN      
        1 malqtaspsl gsrrtpahgs llllllslgw vlpsraqaad mglalltsrl qrtsrdlswq
       61 qpelavllpr arqgtekkac plgqeaqvvd enlvfyeewe leacvdgall aaqmgrvnli
      121 pftyqqlhif krkldefypq gypqsliehl ryfflyvtpe dihkwnvtsl dtvksllkvs
      181 qgrgvdaqva aliaryiggg gqldkaaldt latfrpaylc flrpeqlgsv qlsvlwmttp
      241 qdleacrppq mvvlyhkarm afqnvsgsey vkrikpflgg astedlrvft qqnisidvaa
      301 fkklpteavl sltvakvqkl lgpnlvglka eagnvplrdw isrqsqedld rlglglvggv
      361 pngylvldlh greassggph rlgrgpgpvl tvtaslllas vls
//
LOCUS       XP_061009891             697 aa            linear   MAM 02-DEC-2023
DEFINITION  mesothelin-like protein [Dama dama].
ACCESSION   XP_061009891
VERSION     XP_061009891.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153908.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..697
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..697
                     /product="mesothelin-like protein"
                     /calculated_mol_wt=74488
     Region          27..575
                     /region_name="Mesothelin"
                     /note="Pre-pro-megakaryocyte potentiating factor precursor
                     (Mesothelin); pfam06060"
                     /db_xref="CDD:368727"
     CDS             1..697
                     /gene="LOC133063971"
                     /coded_by="XM_061153908.1:276..2369"
                     /db_xref="GeneID:133063971"
ORIGIN      
        1 mgpragalvs pglallvslt ahcshpqaeg asqggldasr adlwagasas llqgfwcqpa
       61 sqlsrdqlaa lirrmatqhv llrawqlscl anlaarqglq gdfelhppdl llfynltqve
      121 eadcrafirr aaqgdtklla nlpdqraalq hralaclggp qprlsasdll llgvlvcdmd
      181 assiaaadph vlqnlrhcpq ltaaqqaaln rllasgrtvl gppgswnleg lqalgplasy
      241 ispglwmqlq eavgldffrs ivaacragql rqrdarrfvt sfleaksrav sspskrdtgr
      301 pcvrgnitaa tlhddlflvr ydcgqlescl gshvlranld pllqhplpae cqqvvkakla
      361 rvypggvpee qlrlipslay lyslseigqw hitskdtvvt llapdgalen qteailqkfl
      421 dhngtitgal lvaiggsrlc wmsprqiqai rpsefrlaga ldisscpqtr knvlfdkare
      481 afasasttdt yyrfmrpylg gapveelrhl aqanvsmdid tftnlnprvl qslsvgnvtt
      541 llgpnvgdlq karshpiiss wlrslnrsal selgldtgpt gptssahstt gtpsttpwtr
      601 hqaptsegpg stapssgspp ahlgylplam alpagllwll yggtprpswg hpqgicsmve
      661 dctapaphag eqglargagr lprprcrpqg awphpps
//
LOCUS       XP_061009892             308 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA pseudouridylate synthase domain-containing protein 1 [Dama
            dama].
ACCESSION   XP_061009892
VERSION     XP_061009892.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153909.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..308
                     /product="RNA pseudouridylate synthase domain-containing
                     protein 1"
                     /calculated_mol_wt=34066
     Region          18..215
                     /region_name="PseudoU_synth_RluA_like"
                     /note="Pseudouridine synthase, RluA family; cd02869"
                     /db_xref="CDD:211346"
     Site            order(64..67,177)
                     /site_type="active"
                     /db_xref="CDD:211346"
     CDS             1..308
                     /gene="RPUSD1"
                     /coded_by="XM_061153909.1:153..1079"
                     /db_xref="GeneID:133063972"
ORIGIN      
        1 mepgsvenlc vvyrsrdflv vnkhwdvrid skawretltl qkqlrhrfpe ladpdtyygf
       61 rfchqldfst sgalcvalnk aaagsayrcf kdrrvtkayl alvrghvqes rmtisysigk
      121 nstegrthtm ciegtqgcen pkpsltelvv lehglyagdp vskvllqplt grthqlrvhc
      181 salghpivgd ltygqasgqe dqpfrmmlha fylriptste cveactpdpf vssldacwsp
      241 htllqpldel vqvlraapdp dpseggpgpc spctplpgpg rpppppetev qrasclqwls
      301 ewtlepdn
//
LOCUS       XP_061009893             308 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA pseudouridylate synthase domain-containing protein 1 [Dama
            dama].
ACCESSION   XP_061009893
VERSION     XP_061009893.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153910.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..308
                     /product="RNA pseudouridylate synthase domain-containing
                     protein 1"
                     /calculated_mol_wt=34066
     Region          18..215
                     /region_name="PseudoU_synth_RluA_like"
                     /note="Pseudouridine synthase, RluA family; cd02869"
                     /db_xref="CDD:211346"
     Site            order(64..67,177)
                     /site_type="active"
                     /db_xref="CDD:211346"
     CDS             1..308
                     /gene="RPUSD1"
                     /coded_by="XM_061153910.1:165..1091"
                     /db_xref="GeneID:133063972"
ORIGIN      
        1 mepgsvenlc vvyrsrdflv vnkhwdvrid skawretltl qkqlrhrfpe ladpdtyygf
       61 rfchqldfst sgalcvalnk aaagsayrcf kdrrvtkayl alvrghvqes rmtisysigk
      121 nstegrthtm ciegtqgcen pkpsltelvv lehglyagdp vskvllqplt grthqlrvhc
      181 salghpivgd ltygqasgqe dqpfrmmlha fylriptste cveactpdpf vssldacwsp
      241 htllqpldel vqvlraapdp dpseggpgpc spctplpgpg rpppppetev qrasclqwls
      301 ewtlepdn
//
LOCUS       XP_061009894             462 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor SOX-8 [Dama dama].
ACCESSION   XP_061009894
VERSION     XP_061009894.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153911.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..462
                     /product="transcription factor SOX-8"
                     /calculated_mol_wt=48920
     Region          18..89
                     /region_name="Sox_N"
                     /note="Sox developmental protein N terminal; pfam12444"
                     /db_xref="CDD:463586"
     Region          101..175
                     /region_name="HMG-box_SoxE"
                     /note="high mobility group (HMG)-box found in group E
                     SRY-related high-mobility group (HMG) box (Sox)
                     transcription factors; cd22031"
                     /db_xref="CDD:438840"
     Site            order(101..104,106..107,109..110,114,117,128..130,133,137,
                     140,159,169,171)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438840"
     Region          <281..>457
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     CDS             1..462
                     /gene="SOX8"
                     /coded_by="XM_061153911.1:105..1493"
                     /db_xref="GeneID:133063973"
ORIGIN      
        1 mldmsearaq ppcspsgtas smshvedsds dappspagse glgraagagv ggrgdaaeaa
       61 derfpacird avsqvlkgyd wslvpmpvrg ggggalkakp hvkrpmnafm vwaqaarrkl
      121 adqyphlhna elsktlgklw rllsetekrp fveeaerlrv qhkkdhpdyk yqprrrksvk
      181 tgqsdsdsga elghhpggvy ktdaglgdah hhgdhtgqth gpptppttpk tdlhhggkqe
      241 lklegrrlvd sgrqnidfsn vdiselssev ignmdtfdvh efdqylplng hsalpaepgq
      301 paaagsygsa syshsgaagm gaspvwahkg apsasaspte agpprphikt eqlspghygd
      361 qshgspghtd ygsysgqasv ttaapaaaas sftssqcdyt dlqapsyygp fpgypsglyq
      421 ypyfhsprrp yaspllggls vppahsppsn weqpvyttlt rp
//
LOCUS       XP_061009895             251 aa            linear   MAM 02-DEC-2023
DEFINITION  complement C1q tumor necrosis factor-related protein 8 [Dama dama].
ACCESSION   XP_061009895
VERSION     XP_061009895.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153912.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..251
                     /product="complement C1q tumor necrosis factor-related
                     protein 8"
                     /calculated_mol_wt=26820
     Region          69..109
                     /region_name="Collagen"
                     /note="Collagen triple helix repeat (20 copies);
                     pfam01391"
                     /db_xref="CDD:460189"
     Region          117..245
                     /region_name="C1q"
                     /note="C1q domain; pfam00386"
                     /db_xref="CDD:395310"
     CDS             1..251
                     /gene="C1QTNF8"
                     /coded_by="XM_061153912.1:1..756"
                     /db_xref="GeneID:133063974"
ORIGIN      
        1 mvapalllll alpagawrgl glprrpcvqc crpawppaap gpgahvsdgd pwarlprlqp
       61 tidisilkge kgeagirghs grsgkegppg srglrghkgq kgqaglpgaq ctrayaafsv
      121 grreglhsad alqavtfdme lvnldgafdl asgrflctap gvyflslnvh twnyketylh
      181 imrnahaaav lyaqpsersv mqaqslllpl aagdavwvrm fqrdrdnaif gergdlyitf
      241 sghlvkpdae l
//
LOCUS       XP_061009896             368 aa            linear   MAM 02-DEC-2023
DEFINITION  somatostatin receptor type 5 [Dama dama].
ACCESSION   XP_061009896
VERSION     XP_061009896.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153913.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..368
                     /product="somatostatin receptor type 5"
                     /calculated_mol_wt=39676
     Region          52..317
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          77..98
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          114..136
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          159..175
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          201..224
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          249..271
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          285..310
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..368
                     /gene="SSTR5"
                     /coded_by="XM_061153913.1:89..1195"
                     /db_xref="GeneID:133063976"
ORIGIN      
        1 meplfpaspl tswntssavp ggggnengtl agpgpspgar avvvpvlyll vcavglggnt
       61 lviyvvlrha kmktvtniyi lnlavadvll mlglpfvatq naisywpfgp vlcrlvmtld
      121 ginqftsifc ltvmsvdryl avvhpirsar wrrprvakla saavwafslv mslplvvfad
      181 iqegwntcnl swpepvglwg avfiiytsvl gffgpllvic lcyllivvkl kasgvrvgst
      241 rrrserkvtr mvvvvvlvfa gcwlpffivn ivnlafalpe epasagayff vvvlsyansc
      301 anpllygfls dnfrqsfrkv lclrkgygag aedadatepr pgpsgrlqea tmpvrnckan
      361 glmqaskl
//
LOCUS       XP_061009897             447 aa            linear   MAM 02-DEC-2023
DEFINITION  tektin-4 [Dama dama].
ACCESSION   XP_061009897
VERSION     XP_061009897.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153914.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..447
                     /product="tektin-4"
                     /calculated_mol_wt=51596
     Region          56..438
                     /region_name="Tektin"
                     /note="Tektin family; pfam03148"
                     /db_xref="CDD:460827"
     CDS             1..447
                     /gene="TEKT4"
                     /coded_by="XM_061153914.1:1..1344"
                     /db_xref="GeneID:133063977"
ORIGIN      
        1 maqtdilltk epapqtvpac qlpcklydga rntgahtssg latsgfrtak ylldewfqnc
       61 yaryhqafad rdqserqrhe sqqlaaetea laqrtqqdst rkvgerlqdm hgwkselqhq
      121 vgelvsetel llaqkqrleh aldatagpfs ivtdnlqcre rrqhpdlvrd cveiellkea
      181 elirniqell krtimqavsq trlnrehket cemdwsdkve aynideaccr ynnqstdvqf
      241 yphsakfees astpetwakf tqehlyraer erlasvnlrn lidcilqdts edlrlqcdav
      301 nlafgrrcee ledarhkleh hlrktlreit dqehniaalk qaikdkeapl kvaqtrlyqr
      361 shrpnvelcr daaqfrlase veelnlslaa lkeklleaeq slrnledtrm slekdiavkt
      421 nslfidrhkc mahrayyptv lqlagyq
//
LOCUS       XP_061009898             273 aa            linear   MAM 02-DEC-2023
DEFINITION  tryptase-2-like [Dama dama].
ACCESSION   XP_061009898
VERSION     XP_061009898.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153915.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..273
                     /product="tryptase-2-like"
                     /calculated_mol_wt=29920
     Region          29..267
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            29
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(72,119,222)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(216,241,243)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..273
                     /gene="LOC133063978"
                     /coded_by="XM_061153915.1:83..904"
                     /db_xref="GeneID:133063978"
ORIGIN      
        1 mlpllalall lslvpvapap gqalqragiv ggqdapgsrw pwqvslrvsr gywrhlcggs
       61 lihpqwvlta ahcvgpevrd psylrvqlre qhlyyqdqll sisrviphpn yyttengadi
      121 alleldepvs ischvqpvtl ppasetfppg tqcwvtgwgd vdsrrrlppp fplkqvkvpv
      181 vensvcdrky hsglytgdsv pivredmlca gdsrrnpcqg dsggplvckv ngtwlqagvv
      241 swgdgcakpk rpgiytrvts yldwihqfvp qgp
//
LOCUS       XP_061009900             273 aa            linear   MAM 02-DEC-2023
DEFINITION  tryptase-2-like [Dama dama].
ACCESSION   XP_061009900
VERSION     XP_061009900.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153917.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..273
                     /product="tryptase-2-like"
                     /calculated_mol_wt=29820
     Region          29..267
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            29
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(72,119,222)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(216,241,243)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..273
                     /gene="LOC133063979"
                     /coded_by="XM_061153917.1:83..904"
                     /db_xref="GeneID:133063979"
ORIGIN      
        1 mlpllalall lslvpvapap gqalqragiv ggqdapgsrw pwqvslrvsr gywrhlcggs
       61 lihpqwvlta ahcvgpevrd psylrvqlre qhlyyqdqll sisrviphpn yyttengadi
      121 alleldepvs ischvqpvtl ppasetfppg tqcwvtgwgd vdngrhlppp fplkqvkvpv
      181 vensvcdrky hsglytgdsv pivredmlca gdsrrdscqg dsggplvckv ngtwlqagvv
      241 swgdgcakpk rpgiytrvts yldwihqfvp qgp
//
LOCUS       XP_061009901             280 aa            linear   MAM 02-DEC-2023
DEFINITION  mastin-like [Dama dama].
ACCESSION   XP_061009901
VERSION     XP_061009901.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153918.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..280
                     /product="mastin-like"
                     /calculated_mol_wt=30491
     Region          31..270
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            31
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(77,127,227)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(221,246,248)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..280
                     /gene="LOC133063980"
                     /coded_by="XM_061153918.1:87..929"
                     /db_xref="GeneID:133063980"
ORIGIN      
        1 mlwllvmtlp clgrsvpvtp gpssgrglvg ivggcdvsar sypwqvslrf ynrtvgrwih
       61 fcggslihpq wvltaahcve wkslqasair vqvgqlrlyd hdkltkvski vqhpdynqil
      121 saeggadial lrlqapvsls hhvqvvslpp aslrvpegkm cwvtgwgsvt fhsplpppyh
      181 lqevevpvvg nqvcnlhyrk lanatkpikd dmlcagsegq dscqgdsgga lvclwkcswv
      241 qvgvvswghk calpdfpgvy trvtsyvswi lqyvplspgp
//
LOCUS       XP_061009902             674 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 154 [Dama dama].
ACCESSION   XP_061009902
VERSION     XP_061009902.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153919.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..674
                     /product="coiled-coil domain-containing protein 154"
                     /calculated_mol_wt=76423
     Region          57..581
                     /region_name="CCDC154"
                     /note="Coiled-coil domain-containing protein 154;
                     pfam15450"
                     /db_xref="CDD:464723"
     CDS             1..674
                     /gene="CCDC154"
                     /coded_by="XM_061153919.1:14..2038"
                     /db_xref="GeneID:133063981"
ORIGIN      
        1 mshertdssp sseaslpsql stiapedlgl leeelaspes lspeevsekd acsrlpsdas
       61 npeqgtlkrw kqleqwvagl qaevaslrgh rarcehatls llrellqvra clqlqdaqlk
      121 rlqlearqvv papekeaiql pgpqqqnqmq aldkrlvevr ealtqvrrkq alqdserkga
      181 eqetslrlse ltgklkqeeq drevacgalq ksqeeagqkl dhqvarmqaq mtklgeemsl
      241 rflkrearlc gflqksflal ekrmkasesa rlraesalre elesrwrqlq eldkervraq
      301 qdqcqqeech lleqcrgldk avvqltefvq qnqvslnrvl laeqkawdak gqledsrage
      361 latylqenle amqlagelaq qethgalell reksqalevs vaelvrqvkd lsdhflalsw
      421 rldlqeqtls mrlqetqnew eaaeqrwrgg ltrcreeaea rlrevqqrld rlpqqieavt
      481 dkcvlhksds dckisaeata relaveavrq elaallssvq llregnpgrk iaeiqgklat
      541 fqnqmmklet siqdnktiqn lkfntetklr aeamailres vlrlwseegp waptlgsrrg
      601 ptslerqqlf vkevapddvv pvnrwgvyqa vrwlqwkavl mnlasqqtpr saapekplgq
      661 ksarrlsslp vpqk
//
LOCUS       XP_061009903             265 aa            linear   MAM 02-DEC-2023
DEFINITION  protein PERCC1 [Dama dama].
ACCESSION   XP_061009903
VERSION     XP_061009903.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153920.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..265
                     /product="protein PERCC1"
                     /calculated_mol_wt=28036
     CDS             1..265
                     /gene="PERCC1"
                     /coded_by="XM_061153920.1:1..798"
                     /db_xref="GeneID:133063982"
ORIGIN      
        1 maagvirplc dfrlplpalr pfpppapepp dtseeeeege eeeletegpe ghspapcspg
       61 wapevlpqdp sspetplqll rfselisgdi qryfgrkdrg qdpdacdiya dgrpasssar
      121 elscadlvrp argappedhe atepggcspg cpegqargpg lggdgpqllg plaelfdygl
      181 rqcsgpqaag grrlrlerky ghitpmtqrk lppsfwrepa tsplgllhpg tpdfsdllas
      241 wsaeagsell gtgalgleev qlaea
//
LOCUS       XP_061009904             495 aa            linear   MAM 02-DEC-2023
DEFINITION  pentraxin-4 [Dama dama].
ACCESSION   XP_061009904
VERSION     XP_061009904.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153921.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..495
                     /product="pentraxin-4"
                     /calculated_mol_wt=53791
     Region          <62..>215
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     Region          287..485
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cl22861"
                     /db_xref="CDD:473984"
     Site            order(340,423,425,432,435)
                     /site_type="active"
                     /note="calcium mediated ligand binding site [active]"
                     /db_xref="CDD:238086"
     Site            order(385,402,440,485)
                     /site_type="active"
                     /note="intermolecular salt bridges [active]"
                     /db_xref="CDD:238086"
     CDS             1..495
                     /gene="PTX4"
                     /coded_by="XM_061153921.1:145..1632"
                     /db_xref="GeneID:133063983"
ORIGIN      
        1 mppapagtlv eqrlkqslcp hvketvkysm gsptgrtlpf llillhiylh galpqatspv
       61 gqrkpfferl rrleeqfqrf qevtlthlqg ivshynlsfd vevrfqslar esramalaln
      121 qsqaamqgel ghlqtwvrrm qrrgqkadrr llalsaavse gsaqcvreqe tqraaisrla
      181 rdvralqdtl lhltplvqsq garlaalegq lhvagpspaa pkvtlapsrp snwsapqlqg
      241 grqasrapse prdpppnfah rlqgaqeplg lgnqqvwppe spvcnvgpal ifpnastanv
      301 gflrpgfltg lralsicswv rtaadhlgtl lsyateendn klvlhgrdsl apgcvhfvig
      361 dpafrelplq plldgqwhhv cviwtsilgr ywlhvdrrlv atgsrfregy eippggslvl
      421 gqeqdhvggg fdsseafvgs maglaiwdrv lvpgevsnla mgkalptgai ltlanatsvg
      481 gfvqrvnctc lqlcp
//
LOCUS       XP_061009905             473 aa            linear   MAM 02-DEC-2023
DEFINITION  meiosis-specific with OB domain-containing protein isoform X1 [Dama
            dama].
ACCESSION   XP_061009905
VERSION     XP_061009905.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153922.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..473
                     /product="meiosis-specific with OB domain-containing
                     protein isoform X1"
                     /calculated_mol_wt=52574
     Region          <2..416
                     /region_name="rpa1"
                     /note="replication factor-a protein 1 (rpa1); TIGR00617"
                     /db_xref="CDD:273177"
     Region          167..270
                     /region_name="RPA1_DBD_B"
                     /note="A subfamily of OB folds corresponding to the third
                     OB fold, the ssDNA-binding domain (DBD)-B, of human RPA1
                     (also called RPA70). RPA1 is the large subunit of
                     Replication protein A (RPA). RPA is a nuclear
                     ssDNA-binding protein (SSB) which appears to be...;
                     cd04475"
                     /db_xref="CDD:239921"
     Site            order(169,232,252..254)
                     /site_type="other"
                     /note="DBD-B/DBD-A interface [polypeptide binding]"
                     /db_xref="CDD:239921"
     Site            order(209,211,235,239,248,252)
                     /site_type="other"
                     /note="ssDNA binding site [nucleotide binding]"
                     /db_xref="CDD:239921"
     CDS             1..473
                     /gene="MEIOB"
                     /coded_by="XM_061153922.1:148..1569"
                     /db_xref="GeneID:133063984"
ORIGIN      
        1 mansiasknf talsnlhpnm anlkiigivi gktdvkgfpd rknigseryt fsftirdstt
       61 hfvnatswgs edyirslsds frvgecviie npliqtkele reekfspatp sdyklllsen
      121 hstvklcssy evdakllsli ylpvkescdy yslgdivang hsldgkiinv laavrsvgep
      181 kyfttsdrrk gqrcevklyd etessfamic wdsesillaq swvpqetvif aadvrisfdk
      241 frnsmtatvi sktiittnpd tpeanillnf irenkvmnpl ddeidnylke smnlntivdv
      301 ytveqlkvka lknegkadpf ygivyayist lniddettkv vrnrcsgcgy ivneasstct
      361 tcnkdssefk svfpsfdmli dltdhtgtlh scsltgsvae etlgctvvef lammdeqkta
      421 lkwqfllers kiylklslsh rargglrvsv lscrladpve asgslsgqgn iqn
//
LOCUS       XP_061009906             444 aa            linear   MAM 02-DEC-2023
DEFINITION  meiosis-specific with OB domain-containing protein isoform X2 [Dama
            dama].
ACCESSION   XP_061009906
VERSION     XP_061009906.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153923.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..444
                     /product="meiosis-specific with OB domain-containing
                     protein isoform X2"
                     /calculated_mol_wt=49033
     Region          <2..406
                     /region_name="rpa1"
                     /note="replication factor-a protein 1 (rpa1); TIGR00617"
                     /db_xref="CDD:273177"
     Region          167..270
                     /region_name="RPA1_DBD_B"
                     /note="A subfamily of OB folds corresponding to the third
                     OB fold, the ssDNA-binding domain (DBD)-B, of human RPA1
                     (also called RPA70). RPA1 is the large subunit of
                     Replication protein A (RPA). RPA is a nuclear
                     ssDNA-binding protein (SSB) which appears to be...;
                     cd04475"
                     /db_xref="CDD:239921"
     Site            order(169,232,252..254)
                     /site_type="other"
                     /note="DBD-B/DBD-A interface [polypeptide binding]"
                     /db_xref="CDD:239921"
     Site            order(209,211,235,239,248,252)
                     /site_type="other"
                     /note="ssDNA binding site [nucleotide binding]"
                     /db_xref="CDD:239921"
     CDS             1..444
                     /gene="MEIOB"
                     /coded_by="XM_061153923.1:148..1482"
                     /db_xref="GeneID:133063984"
ORIGIN      
        1 mansiasknf talsnlhpnm anlkiigivi gktdvkgfpd rknigseryt fsftirdstt
       61 hfvnatswgs edyirslsds frvgecviie npliqtkele reekfspatp sdyklllsen
      121 hstvklcssy evdakllsli ylpvkescdy yslgdivang hsldgkiinv laavrsvgep
      181 kyfttsdrrk gqrcevklyd etessfamic wdsesillaq swvpqetvif aadvrisfdk
      241 frnsmtatvi sktiittnpd tpeanillnf irenkvmnpl ddeidnylke smnlntivdv
      301 ytveqlkvka lknegkadpf ygivyayist lniddettkv vrnrcsgcgy ivneasstct
      361 tcnkdssefk svfpsfdmli dltdhtgtlh scsltgsvae etlgctlsls hrargglrvs
      421 vlscrladpv easgslsgqg niqn
//
LOCUS       XP_061009908             388 aa            linear   MAM 02-DEC-2023
DEFINITION  meiosis-specific with OB domain-containing protein isoform X3 [Dama
            dama].
ACCESSION   XP_061009908
VERSION     XP_061009908.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153925.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..388
                     /product="meiosis-specific with OB domain-containing
                     protein isoform X3"
                     /calculated_mol_wt=43340
     Region          <2..387
                     /region_name="rpa1"
                     /note="replication factor-a protein 1 (rpa1); TIGR00617"
                     /db_xref="CDD:273177"
     Region          167..270
                     /region_name="RPA1_DBD_B"
                     /note="A subfamily of OB folds corresponding to the third
                     OB fold, the ssDNA-binding domain (DBD)-B, of human RPA1
                     (also called RPA70). RPA1 is the large subunit of
                     Replication protein A (RPA). RPA is a nuclear
                     ssDNA-binding protein (SSB) which appears to be...;
                     cd04475"
                     /db_xref="CDD:239921"
     Site            order(169,232,252..254)
                     /site_type="other"
                     /note="DBD-B/DBD-A interface [polypeptide binding]"
                     /db_xref="CDD:239921"
     Site            order(209,211,235,239,248,252)
                     /site_type="other"
                     /note="ssDNA binding site [nucleotide binding]"
                     /db_xref="CDD:239921"
     CDS             1..388
                     /gene="MEIOB"
                     /coded_by="XM_061153925.1:148..1314"
                     /db_xref="GeneID:133063984"
ORIGIN      
        1 mansiasknf talsnlhpnm anlkiigivi gktdvkgfpd rknigseryt fsftirdstt
       61 hfvnatswgs edyirslsds frvgecviie npliqtkele reekfspatp sdyklllsen
      121 hstvklcssy evdakllsli ylpvkescdy yslgdivang hsldgkiinv laavrsvgep
      181 kyfttsdrrk gqrcevklyd etessfamic wdsesillaq swvpqetvif aadvrisfdk
      241 frnsmtatvi sktiittnpd tpeanillnf irenkvmnpl ddeidnylke smnlntivdv
      301 ytveqlkvka lknegkadpf ygivyayist lniddettkv vrnrcsgcgy ivneasstct
      361 tcnkdssefk svfpsfdmli dltdhtgs
//
LOCUS       XP_061009909             358 aa            linear   MAM 02-DEC-2023
DEFINITION  meiosis-specific with OB domain-containing protein isoform X4 [Dama
            dama].
ACCESSION   XP_061009909
VERSION     XP_061009909.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153926.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..358
                     /product="meiosis-specific with OB domain-containing
                     protein isoform X4"
                     /calculated_mol_wt=40385
     Region          <2..>267
                     /region_name="rpa1"
                     /note="replication factor-a protein 1 (rpa1); TIGR00617"
                     /db_xref="CDD:273177"
     Region          167..270
                     /region_name="RPA1_DBD_B"
                     /note="A subfamily of OB folds corresponding to the third
                     OB fold, the ssDNA-binding domain (DBD)-B, of human RPA1
                     (also called RPA70). RPA1 is the large subunit of
                     Replication protein A (RPA). RPA is a nuclear
                     ssDNA-binding protein (SSB) which appears to be...;
                     cd04475"
                     /db_xref="CDD:239921"
     Site            order(169,232,252..254)
                     /site_type="other"
                     /note="DBD-B/DBD-A interface [polypeptide binding]"
                     /db_xref="CDD:239921"
     Site            order(209,211,235,239,248,252)
                     /site_type="other"
                     /note="ssDNA binding site [nucleotide binding]"
                     /db_xref="CDD:239921"
     CDS             1..358
                     /gene="MEIOB"
                     /coded_by="XM_061153926.1:148..1224"
                     /db_xref="GeneID:133063984"
ORIGIN      
        1 mansiasknf talsnlhpnm anlkiigivi gktdvkgfpd rknigseryt fsftirdstt
       61 hfvnatswgs edyirslsds frvgecviie npliqtkele reekfspatp sdyklllsen
      121 hstvklcssy evdakllsli ylpvkescdy yslgdivang hsldgkiinv laavrsvgep
      181 kyfttsdrrk gqrcevklyd etessfamic wdsesillaq swvpqetvif aadvrisfdk
      241 frnsmtatvi sktiittnpd tpeanillnf irenkvmnpl ddeidnylke smnlntivdv
      301 ytveqlkvka lknegkadpf ygivyayist lniddettkv vrnrwwilyq lshqgsll
//
LOCUS       XP_061009910             407 aa            linear   MAM 02-DEC-2023
DEFINITION  ribosomal protein uL3-like [Dama dama].
ACCESSION   XP_061009910
VERSION     XP_061009910.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153927.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..407
                     /product="ribosomal protein uL3-like"
                     /calculated_mol_wt=46241
     Region          1..400
                     /region_name="PTZ00103"
                     /note="60S ribosomal protein L3; Provisional"
                     /db_xref="CDD:240267"
     CDS             1..407
                     /gene="RPL3L"
                     /coded_by="XM_061153927.1:508..1731"
                     /db_xref="GeneID:133063985"
ORIGIN      
        1 mshrkfsapr hghlgflphk rsrrhrgkvk twprddpsrp vhltaflgyk agmthtlrev
       61 hrpglkiskr eeveavtive tpplvvvgvv gyvatprglr sfktifaehl sdecrrrfyk
      121 dwhkskkkaf tkackrwrda dgkkqlqkdf aamkkyckvi rvivhtqmkl lpfrqkkahi
      181 meiqlnggtv aekvawaqar lekqvpvhsv fsqsevidvi avtkgrgvkg vtsrwhtkkl
      241 prkthkglrk vacigawhpa rvgcsiarag qkgyhhrtel nkkiyrigrg lhtedgkvvk
      301 nnastsydvt dksitplggf phygevnndf vmlkgciagt kkrvitlrks llvhhsrqal
      361 enidlkfidt tskfghgrfq taqekrafmg pqkkhlekek petsgdl
//
LOCUS       XP_061009911             222 aa            linear   MAM 02-DEC-2023
DEFINITION  FAD-linked sulfhydryl oxidase ALR [Dama dama].
ACCESSION   XP_061009911
VERSION     XP_061009911.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153928.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..222
                     /product="FAD-linked sulfhydryl oxidase ALR"
                     /calculated_mol_wt=25159
     Region          121..213
                     /region_name="Evr1_Alr"
                     /note="Erv1 / Alr family; pfam04777"
                     /db_xref="CDD:461423"
     CDS             1..222
                     /gene="GFER"
                     /coded_by="XM_061153928.1:22..690"
                     /db_xref="GeneID:133063986"
ORIGIN      
        1 mpvwrprwpg rhcaggmaap sersrfgags lfsflpggar sevtddlvtd argrgagrre
       61 aaasarapsa gpasdppase lasprrpcra cvdfkswmrt qqkrdskfre dcpqdreelg
      121 rhswavlhtl aayypdlptp eqqqdmaqfi hlfskfypce ecaedirkri yrdqpdtrtr
      181 vsftqwlcrl hnevnrklgk pdfdcslvde rwrdgwkdgs cd
//
LOCUS       XP_061009912            1444 aa            linear   MAM 02-DEC-2023
DEFINITION  caskin-1 [Dama dama].
ACCESSION   XP_061009912
VERSION     XP_061009912.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153929.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1444
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1444
                     /product="caskin-1"
                     /calculated_mol_wt=150840
     Region          7..46
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          30..291
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          48..79
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          81..112
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(114,116,120..121,124..126,128..129,133,136,145,147,
                     149,153..154,157..159,161..162,166,169,186,188,190,
                     194..195,198..200,202..203,207,210)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          114..145
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          147..186
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          188..218
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          221..251
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          253..287
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          284..345
                     /region_name="SH3_Caskin1"
                     /note="Src Homology 3 domain of CASK interacting protein
                     1; cd12062"
                     /db_xref="CDD:212995"
     Site            order(290,292,295,300,318..319,338,340..341)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212995"
     Region          373..421
                     /region_name="Caskin1-CID"
                     /note="Caskin1 CASK-interaction domain; pfam16600"
                     /db_xref="CDD:465190"
     Region          471..536
                     /region_name="SAM_caskin1,2_repeat1"
                     /note="SAM domain of caskin protein repeat 1; cd09497"
                     /db_xref="CDD:188896"
     Region          537..607
                     /region_name="SAM_caskin1,2_repeat2"
                     /note="SAM domain of caskin protein repeat 2; cd09498"
                     /db_xref="CDD:188897"
     Region          721..>1130
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          880..951
                     /region_name="Caskin-Pro-rich"
                     /note="Proline rich region of Caskin proteins; pfam16907"
                     /db_xref="CDD:465308"
     Region          1382..1444
                     /region_name="Caskin-tail"
                     /note="C-terminal region of Caskin; pfam16632"
                     /db_xref="CDD:465209"
     CDS             1..1444
                     /gene="CASKIN1"
                     /coded_by="XM_061153929.1:1..4335"
                     /db_xref="GeneID:133063988"
ORIGIN      
        1 mgkeqelvqa vkaedvgtaq rllqrprpgk akllgstkki nvnfqdpdgf salhhaalng
       61 ntelitllle aqaavdikdn kgmrplhyaa wqgrkepmkl vlkagsavni psdeghiplh
      121 laaqhghydv semllqhqsn pcmvdnsgkt pldlacefgr vgvvqlllss nmctallepr
      181 pgdttdpngt splhlaakng hidiirlllq agidinrqtk sgtalheaal cgktevvrll
      241 ldnginahvr ntysqtaldi vhqfttsqas keikqllrea saalqvratk dycnnydlts
      301 lnvkagdiit vleqhpdgrw kgcihdnrtg ndrvgyfpss lgeaiikrag pragaepspp
      361 qggssagpaa ppeeiwvlrk pfaggdrsgs lsstaggrsg gghtlhagse gvkllatvls
      421 qkpvsdsspg dspvkppegp agatraqppa ahvgpgygeq ppkkleaase gkgaeavsqw
      481 latfqlqlya pnfisagydl ptisrmtped ltaigvtkpg hrkkitaeis glslpdwlpe
      541 hkpanlavwl smiglaqyyk vlvdngyeni dfitditwed lqeigitklg hqkklmlavr
      601 klaelqkaey akyeggplrr kapqslevma iesppppepa padcqspkmt tfqdselsge
      661 lqaaltgpae gaaaatapae kpsnhlpptp rasgrqepsl ggrarhmsss qellgdgppg
      721 psspmsrsqe ylldegpapg tppkearpsr hghsvkrasv ppvpgkprqv lppgashftp
      781 pqtptkprps spqalggphg papatakvkp tpqllppter pmsprslpqs pthrgfayvl
      841 pqpveseagp aapgpaptat ptpvptlclp peadaepgrp kkrahslnry aasdseperd
      901 ellvpaaagp yatvqrrvgr shsvrapaga dknvnrsqsf avrprkkgpp ppppkrsssa
      961 masanladep apdaetegag aedsrlgvra qrrrasdlag svdtgsagsv ksiaamlels
     1021 siggggraar rppeghpmph paspepgrva tvlasvkhke aigpdgevvn rrrtlsgpvt
     1081 gllatarrgs gepagpadhg qlveegaarq rprgptkgev gaegpplarv easatlkrri
     1141 rakqsqqenv kfiltesdtv krrpkvkere vgpepppppl svyqngtgtv rrrpaseqag
     1201 ppelpppppp aepppsdlmh lpplpppdsd arklakppvs pkpvlaqpvp kiqgsptpas
     1261 kkvplpgpgs pevkrahgtp ppvspkpppp ptapkpakaa aglqsgsasp spapsparqq
     1321 paalakpast ppalsaspas parppspgap alhvpakppr aaaaaagppa apdgaspgds
     1381 arqkleetsa claaalqave ekirqedaqg srpsaaeeks tgsilddigs mfddladqld
     1441 amle
//
LOCUS       XP_061009913            1742 aa            linear   MAM 02-DEC-2023
DEFINITION  ATP-binding cassette sub-family A member 17-like [Dama dama].
ACCESSION   XP_061009913
VERSION     XP_061009913.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153930.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1742
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1742
                     /product="ATP-binding cassette sub-family A member
                     17-like"
                     /calculated_mol_wt=196737
     Region          1..>43
                     /region_name="rim_protein"
                     /note="retinal-specific rim ABC transporter; TIGR01257"
                     /db_xref="CDD:130324"
     Region          <173..1663
                     /region_name="rim_protein"
                     /note="retinal-specific rim ABC transporter; TIGR01257"
                     /db_xref="CDD:130324"
     CDS             1..1742
                     /gene="LOC133063989"
                     /coded_by="XM_061153930.1:1..5229"
                     /db_xref="GeneID:133063989"
ORIGIN      
        1 mtmfrnlkll lwknfilkkr ktlvtvleil mpllfcivil ylrfgslprk rppvdysvid
       61 itslpeffnq fplkilgcps vplfekyiiq dpkafyvltg ivfdhnfnds teplplevey
      121 hlrfsffqrn ylslslilpq ddvqgwltsf lyppnlsqep rdygvsegga pgyyqegfls
      181 iqhatdraim whhaptettg lfqslsvllk rfphsayvrd sfflvlqnef plflmlsfic
      241 ielitinsiv lekerklkey mcmmglqnwq hwvawfivff isasivvsfm tilfcteiee
      301 savfgnsdps lifvflmcfa iatiffafmi stffqkahva tasggiiffl tylpylylaf
      361 tysrrssfqk iafcllsnva malgvrlist feirgtgiqw rnmgsiggef nftqvllmll
      421 ldsvlyglva wyveaifpge ygtpkpwyff lmpsywwgep tslrkpvldl edpqqalgnk
      481 fiqneptnli kgieiqhlyk vfykgkdelm avkdltmnly qgqitvllgh ngagktttcs
      541 iltglitpss gkafingyei sqdmlqirks mgwcpqhdil ydnltvaehl yfyaqlkglp
      601 rqkcpeevkr mlhvlgleek rdsrskflsg gmrrklsigi aliagskvlm ldeptsgvda
      661 isrraiwdll qqhksdrtil ltthfmdead llgdriaima kgelqccgss lflkekygag
      721 yyitlvrkph cdseklslli yqhipyavfq ssigeeltfi lpkesmhrfe alftdlelrq
      781 eelgiasfga svttmeeifi rvnklmdsni dlqiiklpsf hshplvsrvp vnrirrlhsr
      841 ifsipsglpi hpntgfsllc qqfyamflkr atyswrnwmm mlsiqilvpl vilsislsfl
      901 tfdismdnsp leltlkvygq tivpfyispn srlgpqfver ltdvlvaegq iplelqspve
      961 afllekleee pevfdqnylv aisfddmgnh tivtalfnnq ayhsvaqvla lvdnvlfkll
     1021 sgprasitvl nhpqpqssme taedilyegp kghylvinll fgmaflsssf siltvkergl
     1081 kakqvqfisg vhvatfwlss llwdllsflv psllllvvfl yfneeafthk envpavflml
     1141 mlyawaiipf iyltsfcfdn agnacvklii mltflsigpf vlvsvtseke lgyttisdsl
     1201 ddmflllpgh clgmalsnly ynfelqkfck aksldyvecs kvsegyvvqe diyawkslgm
     1261 gkyltalais glvylillfl ietnvlwelk arfsglywkq klvvlqnaes vpgdqdveee
     1321 anmiknswed lckknplvlk elskvysrkv pplavnkvsf tvqaeecfgl lglngagktt
     1381 ifkiltgees itsgdafvns islssdlrkv rqwigycpqv dalldhmtgk etlvmfsrlr
     1441 giperhissc vdqilddllm ytyadklvrt ysggnrrkls agiallgepv vifldepstg
     1501 mdpvarrllw gtvararksg kaiiitshsm eecealctrl aimvqgqfkc lgspqhlksk
     1561 fgsgyslrak irsdgqqetl eefkafvglt fpgsvledeh qgmvhyhlpg ddlswakvfg
     1621 imeqaktkym ledysvnqis lediflsfsc pvppaqgsnr qerakpadpa spgrllspss
     1681 sqqlsppptp pptpcssqhf sqplswpptp ipfrsssqpp slprsppasq ppsphpskta
     1741 ll
//
LOCUS       XP_061009915             580 aa            linear   MAM 02-DEC-2023
DEFINITION  netrin-3 [Dama dama].
ACCESSION   XP_061009915
VERSION     XP_061009915.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153932.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..580
                     /product="netrin-3"
                     /calculated_mol_wt=61167
     Region          34..253
                     /region_name="Laminin_N"
                     /note="Laminin N-terminal (Domain VI); cl02806"
                     /db_xref="CDD:470680"
     Region          254..299
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(255,257,267,274,276,285)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          310..366
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(311,313,320,338,341,350)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          373..422
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(374,376,386,393,395,404)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          456..562
                     /region_name="NTR_netrin-1_like"
                     /note="NTR domain, Netrin-1-like subfamily; The C-terminal
                     NTR domain of netrins is also called domain C in the
                     context of C. elegans netrin UNC-6. Netrins are secreted
                     proteins that function as tropic cues in the direction of
                     axon growth and cell migration...; cd03579"
                     /db_xref="CDD:239634"
     CDS             1..580
                     /gene="NTN3"
                     /coded_by="XM_061153932.1:1..1743"
                     /db_xref="GeneID:133063990"
ORIGIN      
        1 mpgwpwglll tagtlsaals pgppapadpc hddggaprgc vpglvnaalg revlasstcg
       61 rpatracdas dprrahpaal ltsaggtasp vcwrsdsltq vphnvtltvp lgkafelvfv
      121 slrfcsappt slallksqdh grswtplgff sshcgldfgr lpapadgpag pgpealcfpa
      181 pqaqpdgggl lafsvqdgsp pgldldsspv lqdwvtatdi qvvltrpavl gdtrgsaata
      241 pysysatelq vggrckcngh asrclldpqg hltcdcrhgt egpdcsrckp fycdrpwqra
      301 ttreahacla cscngharrc rfnmelyrls grrsggvcln crhntagrhc hycregfyrd
      361 pgralsdrra cracdchpvg aagktcnqtt gqcpckdgvt gltcnrcapg fqqsrspvap
      421 cvktpvpgpa eesspvepqd cdlhckparg syrislkkfc rkdyavqvav gargeargsw
      481 trfpvavlav frsgeerarr gssalwvpar daacgcprll pgrrylllgg gpgaavggpg
      541 grgpglsaar gslvlpwrda wtrrlrrlqr rerrgrcgaa
//
LOCUS       XP_061009916             462 aa            linear   MAM 02-DEC-2023
DEFINITION  kremen protein 2 [Dama dama].
ACCESSION   XP_061009916
VERSION     XP_061009916.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153933.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..462
                     /product="kremen protein 2"
                     /calculated_mol_wt=49099
     Region          34..119
                     /region_name="KR"
                     /note="Kringle domain; smart00130"
                     /db_xref="CDD:214527"
     Site            45
                     /site_type="active"
                     /note="putative domain interaction site [active]"
                     /db_xref="CDD:238056"
     Site            order(63,71,99,101,111)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:238056"
     Region          124..205
                     /region_name="WSC"
                     /note="WSC domain; pfam01822"
                     /db_xref="CDD:460348"
     Region          219..324
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(227,229,231,257,262,296,320,322,324)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     CDS             1..462
                     /gene="KREMEN2"
                     /coded_by="XM_061153933.1:364..1752"
                     /db_xref="GeneID:133063991"
ORIGIN      
        1 mgtrppkall lllllrllpp rgasagslqs pglsecfqvn gadyrghqnr tgprgagrpc
       61 lywdqtqqhs yssasdpqgr wglgahnfcr npdgdvqpwc yvaeteegiy wrycdiptch
      121 mpgylgcfmd sgappalsgp sgtstkltvq vclrfcrmkg yqlagveagy acfcgsesdl
      181 argrpapatd cdqicfghpg qlcggdgrlg iyevsvgscq gnwtapqgvi yspdfpdeyg
      241 pdrncswvla ppgaalelaf rlfeladprd rlelrdaasg sllrafdgar ppppgplrlr
      301 aaalrltfrs darghaqgfa ltyrglqdad adlaplegst qtpaapldga nvscspgpga
      361 peasmgaqvf stvtavsvll llvlsllrll rgrgcllaps kgpptlrpsr dptrswavwy
      421 rrprgvalpc ppgdpqvegl tasyrplsas sqsslrslis al
//
LOCUS       XP_061009917             217 aa            linear   MAM 02-DEC-2023
DEFINITION  claudin-9 [Dama dama].
ACCESSION   XP_061009917
VERSION     XP_061009917.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153934.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..217
                     /product="claudin-9"
                     /calculated_mol_wt=22715
     Region          4..165
                     /region_name="PMP22_Claudin"
                     /note="PMP-22/EMP/MP20/Claudin family; cl21598"
                     /db_xref="CDD:473919"
     CDS             1..217
                     /gene="CLDN9"
                     /coded_by="XM_061153934.1:1..654"
                     /db_xref="GeneID:133063992"
ORIGIN      
        1 mastglellg mtlavlgwlg tlvscalplw kvtafignsi vvaqvvwegl wmscvvqstg
       61 qmqckvydsl lalpqdlqaa ralciialll allgvlvait gaqcttcved egakarivlt
      121 ggvllllagi lvlipvcwta haiiqdfynp lvaealkrel gaslylgwaa sallllgggl
      181 lcctcpppqi erprgprlgy sipsrsgasg ldkrdyv
//
LOCUS       XP_061009918             221 aa            linear   MAM 02-DEC-2023
DEFINITION  claudin-6 [Dama dama].
ACCESSION   XP_061009918
VERSION     XP_061009918.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153935.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..221
                     /product="claudin-6"
                     /calculated_mol_wt=23453
     Region          5..170
                     /region_name="PMP22_Claudin"
                     /note="PMP-22/EMP/MP20/Claudin family; cl21598"
                     /db_xref="CDD:473919"
     CDS             1..221
                     /gene="CLDN6"
                     /coded_by="XM_061153935.1:50..715"
                     /db_xref="GeneID:133063993"
ORIGIN      
        1 masaglqilg ivltlfgwvn alvsctlplw kvtafignsi vvaqvvwegl wmscvvqstg
       61 qmqckvydsl lalpqdlqaa ralcvitllv allgllvyla gakcttcved kdskarlvlt
      121 sgiifvisgv ltlipvcwta htiiqdfynp lvveaqkrel gaslylgwaa sgllllgggl
      181 lcctcpsggs rgsrhymary svsaphtasr gpseyptkny v
//
LOCUS       XP_061009919             730 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger and SCAN domain-containing protein 10 [Dama dama].
ACCESSION   XP_061009919
VERSION     XP_061009919.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153936.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..730
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..730
                     /product="zinc finger and SCAN domain-containing protein
                     10"
                     /calculated_mol_wt=80349
     Region          2..>70
                     /region_name="SCAN"
                     /note="leucine rich region; smart00431"
                     /db_xref="CDD:128708"
     Region          293..314
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(298,300,302,304..305,308..309,313,327,329,333..334,
                     337..338,341,355,357,359,361..362,365..366,369)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          322..342
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(322,325,338,342)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          344..715
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          350..370
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          378..398
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          424..444
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          470..490
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(475,477,479,481..482,485..486,489,503,505,509..510,
                     513..514,517,531,533,535,537..538,541..542,545)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          498..518
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(498,501,514,518)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          526..546
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          554..574
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          582..602
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(587,589,591,593..594,597..598,601,615,617,621..622,
                     625..626,629,643,645,647,649..650,653..654,657)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          610..630
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(610,613,626,630)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          638..658
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          676..696
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(676,679,692,696)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          704..724
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..730
                     /gene="ZSCAN10"
                     /coded_by="XM_061153936.1:1..2193"
                     /db_xref="GeneID:133063994"
ORIGIN      
        1 mgpraslsrl relcnhwlrp alhtkkqile llvleqflsv lpphllarlq gqplrdgeev
       61 vlllegvrre ssnvgpldfs fnagkncpha dstleeqgas fqvsshspkk eapsegspal
      121 epsqalppsq sgpskpaemg dwrrslssrq plspgpkrtl qalqesalqg pdlwpeensg
      181 dqelaavles ltfedvpakk awpvhplgtg grtleeafka eepkgvswps tasanaqaes
      241 prvaeephaq slgsgpetsg pggemsppgr sdvlkvkvae gvpksepevk fictdcgvsf
      301 pqlarleahq lhshpgarsf lclccgkgfg rssilklhmr thtderphtc hlcghrfrqs
      361 shlnkhlqth ssepaflcae cgqgfqrrar ltqhllahaq dqkapggape tkppappelt
      421 vvlcshcgqt fqrrsslkrh lrihakdkgh qcsecsgslr pgperrpyvc secgkafrrs
      481 ehlgahwrvh tgerpfscqv cgrsfsqssq lvchqrvhtg ekpygcphcg krfmrragla
      541 rhllthggpr phhcaqcgks fsqtqdltrh rrshtgekpc rcsecgegfs qsahlarhqr
      601 ihtgekphvc dtcghrfrns snlarhrrsh tgerpygceq cgrsfrrnah lqrhlathag
      661 agdeaasgpa eppqecpecg kvfsrscnll rhmlvhtgar pyscaqcgrs fsrnshllrh
      721 lrtharetly
//
LOCUS       XP_061009920             456 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 213 [Dama dama].
ACCESSION   XP_061009920
VERSION     XP_061009920.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153937.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..456
                     /product="zinc finger protein 213"
                     /calculated_mol_wt=50856
     Region          41..145
                     /region_name="SCAN"
                     /note="leucine rich region; smart00431"
                     /db_xref="CDD:128708"
     Region          199..236
                     /region_name="KRAB_A-box"
                     /note="KRAB (Kruppel-associated box) domain -A box;
                     cd07765"
                     /db_xref="CDD:143639"
     Region          <312..448
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          316..336
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(321,323,325,327..328,331..332,335,349,351,355..356,
                     359..360,363,377,379,381,383..384,387..388,391)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          344..364
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(344,347,360,364)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          372..392
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          400..420
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          428..448
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..456
                     /gene="ZNF213"
                     /coded_by="XM_061153937.1:427..1797"
                     /db_xref="GeneID:133063995"
ORIGIN      
        1 maappepqdq apeegeglli vkvedcsweq dparpedcgd pevcrrrfrq fcygdvggph
       61 eafsqlwelc crwlrpelrt keqilellvl eqflnvlpvg vqdwvcqrcp gsgeeavalv
      121 edlqkqpvka wsqdmpserv epkaavqgsq aqgpprragt rsqppvpwep hsrgaqlpal
      181 kqgntrettd tcfasggpvt lgdipfyfsr eewgsldpaq rdlfwdikre nsrnvalglg
      241 rrshsersql eevvtalpdq aagdettawr peeaeawegg arpgalrgrg agarrgrppt
      301 rrrqlrdlaa ekphscgqcg krfrwgsdla rhqrthtgek phkcqecdks frsssdlarh
      361 qgvhtgqkpf scaqcgksfs rsayladhqr ihtgekpfgc sdcgksfslr sylldhrrvh
      421 tgerpfgcge cdksfkqrah liahqslhak maqpvg
//
LOCUS       XP_061009921             456 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 213 [Dama dama].
ACCESSION   XP_061009921
VERSION     XP_061009921.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153938.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..456
                     /product="zinc finger protein 213"
                     /calculated_mol_wt=50856
     Region          41..145
                     /region_name="SCAN"
                     /note="leucine rich region; smart00431"
                     /db_xref="CDD:128708"
     Region          199..236
                     /region_name="KRAB_A-box"
                     /note="KRAB (Kruppel-associated box) domain -A box;
                     cd07765"
                     /db_xref="CDD:143639"
     Region          <312..448
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          316..336
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(321,323,325,327..328,331..332,335,349,351,355..356,
                     359..360,363,377,379,381,383..384,387..388,391)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          344..364
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(344,347,360,364)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          372..392
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          400..420
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          428..448
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..456
                     /gene="ZNF213"
                     /coded_by="XM_061153938.1:196..1566"
                     /db_xref="GeneID:133063995"
ORIGIN      
        1 maappepqdq apeegeglli vkvedcsweq dparpedcgd pevcrrrfrq fcygdvggph
       61 eafsqlwelc crwlrpelrt keqilellvl eqflnvlpvg vqdwvcqrcp gsgeeavalv
      121 edlqkqpvka wsqdmpserv epkaavqgsq aqgpprragt rsqppvpwep hsrgaqlpal
      181 kqgntrettd tcfasggpvt lgdipfyfsr eewgsldpaq rdlfwdikre nsrnvalglg
      241 rrshsersql eevvtalpdq aagdettawr peeaeawegg arpgalrgrg agarrgrppt
      301 rrrqlrdlaa ekphscgqcg krfrwgsdla rhqrthtgek phkcqecdks frsssdlarh
      361 qgvhtgqkpf scaqcgksfs rsayladhqr ihtgekpfgc sdcgksfslr sylldhrrvh
      421 tgerpfgcge cdksfkqrah liahqslhak maqpvg
//
LOCUS       XP_061009923             470 aa            linear   MAM 02-DEC-2023
DEFINITION  caspase-14-like isoform X1 [Dama dama].
ACCESSION   XP_061009923
VERSION     XP_061009923.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153940.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..470
                     /product="caspase-14-like isoform X1"
                     /calculated_mol_wt=50269
     Region          230..469
                     /region_name="CASc"
                     /note="Caspase, interleukin-1 beta converting enzyme (ICE)
                     homologues; Cysteine-dependent aspartate-directed
                     proteases that mediate programmed cell death (apoptosis).
                     Caspases are synthesized as inactive zymogens and
                     activated by proteolysis of the peptide...; cl00042"
                     /db_xref="CDD:444667"
     Site            order(230,291,330,337,401..405,409..410)
                     /site_type="other"
                     /note="substrate pocket [chemical binding]"
                     /db_xref="CDD:237997"
     Site            order(290,332)
                     /site_type="active"
                     /db_xref="CDD:237997"
     Site            order(338,386..387,394,397,400,422,429,435,453,458..459,
                     461,464..465)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:237997"
     Site            order(339,385)
                     /site_type="active"
                     /note="proteolytic cleavage site [active]"
                     /db_xref="CDD:237997"
     CDS             1..470
                     /gene="LOC133063996"
                     /coded_by="XM_061153940.1:95..1507"
                     /db_xref="GeneID:133063996"
ORIGIN      
        1 maflvagmlq vasqvadare slgrkgkysv kgprvalalc spevsastva llegvfqtlg
       61 fescqrqess iqgfrgelts frerldahgg pvgcafvalv aprrqlrqsq qlvrelscck
      121 alwghpkvfl llssapgavp epgaflaslg elcgrhphws llqlltevfs rtaqesagaa
      181 ycpvlrsslr galylgnvep wgpepepgps aqydmsgara alllavtqgr pgaqhdveal
      241 gglcqalgfk talrtdpaaq afqeemaqfr kwldahrgpv scalvalmah ggpqgqllga
      301 dgqeghleal vqelsccgal qgrpkifllq acrgghrdag vgpaalpwfr rwlrappatp
      361 sqadvlhvca deqgnssrgp tpgspnqadv lmvyaaaegc vayrdekgsd fiqtlvevlr
      421 adpkadllel mtevnrqvce ldvlgpdcde rrkvcleirs slrrrlclqi
//
LOCUS       XP_061009924             466 aa            linear   MAM 02-DEC-2023
DEFINITION  caspase-14-like isoform X2 [Dama dama].
ACCESSION   XP_061009924
VERSION     XP_061009924.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153941.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..466
                     /product="caspase-14-like isoform X2"
                     /calculated_mol_wt=49771
     Region          230..465
                     /region_name="CASc"
                     /note="Caspase, interleukin-1 beta converting enzyme (ICE)
                     homologues; Cysteine-dependent aspartate-directed
                     proteases that mediate programmed cell death (apoptosis).
                     Caspases are synthesized as inactive zymogens and
                     activated by proteolysis of the peptide...; cl00042"
                     /db_xref="CDD:444667"
     Site            order(230,291,330,337,401..405,409..410)
                     /site_type="other"
                     /note="substrate pocket [chemical binding]"
                     /db_xref="CDD:237997"
     Site            order(290,332)
                     /site_type="active"
                     /db_xref="CDD:237997"
     Site            order(338,386..387,394,397,400,422,429,435,449,454..455,
                     457,460..461)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:237997"
     Site            order(339,385)
                     /site_type="active"
                     /note="proteolytic cleavage site [active]"
                     /db_xref="CDD:237997"
     CDS             1..466
                     /gene="LOC133063996"
                     /coded_by="XM_061153941.1:95..1495"
                     /db_xref="GeneID:133063996"
ORIGIN      
        1 maflvagmlq vasqvadare slgrkgkysv kgprvalalc spevsastva llegvfqtlg
       61 fescqrqess iqgfrgelts frerldahgg pvgcafvalv aprrqlrqsq qlvrelscck
      121 alwghpkvfl llssapgavp epgaflaslg elcgrhphws llqlltevfs rtaqesagaa
      181 ycpvlrsslr galylgnvep wgpepepgps aqydmsgara alllavtqgr pgaqhdveal
      241 gglcqalgfk talrtdpaaq afqeemaqfr kwldahrgpv scalvalmah ggpqgqllga
      301 dgqeghleal vqelsccgal qgrpkifllq acrgghrdag vgpaalpwfr rwlrappatp
      361 sqadvlhvca deqgnssrgp tpgspnqadv lmvyaaaegc vayrdekgsd fiqtlvevlr
      421 adpkadllel mtevceldvl gpdcderrkv cleirsslrr rlclqi
//
LOCUS       XP_061009925             423 aa            linear   MAM 02-DEC-2023
DEFINITION  caspase-14-like isoform X3 [Dama dama].
ACCESSION   XP_061009925
VERSION     XP_061009925.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153942.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..423
                     /product="caspase-14-like isoform X3"
                     /calculated_mol_wt=45314
     Region          183..422
                     /region_name="CASc"
                     /note="Caspase, interleukin-1 beta converting enzyme (ICE)
                     homologues; Cysteine-dependent aspartate-directed
                     proteases that mediate programmed cell death (apoptosis).
                     Caspases are synthesized as inactive zymogens and
                     activated by proteolysis of the peptide...; cl00042"
                     /db_xref="CDD:444667"
     Site            order(183,244,283,290,354..358,362..363)
                     /site_type="other"
                     /note="substrate pocket [chemical binding]"
                     /db_xref="CDD:237997"
     Site            order(243,285)
                     /site_type="active"
                     /db_xref="CDD:237997"
     Site            order(291,339..340,347,350,353,375,382,388,406,411..412,
                     414,417..418)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:237997"
     Site            order(292,338)
                     /site_type="active"
                     /note="proteolytic cleavage site [active]"
                     /db_xref="CDD:237997"
     CDS             1..423
                     /gene="LOC133063996"
                     /coded_by="XM_061153942.1:95..1366"
                     /db_xref="GeneID:133063996"
ORIGIN      
        1 maflvagmlq vasqvadare slgrkgfrge ltsfrerlda hggpvgcafv alvaprrqlr
       61 qsqqlvrels cckalwghpk vflllssapg avpepgafla slgelcgrhp hwsllqllte
      121 vfsrtaqesa gaaycpvlrs slrgalylgn vepwgpepep gpsaqydmsg araalllavt
      181 qgrpgaqhdv ealgglcqal gfktalrtdp aaqafqeema qfrkwldahr gpvscalval
      241 mahggpqgql lgadgqeghl ealvqelscc galqgrpkif llqacrgghr dagvgpaalp
      301 wfrrwlrapp atpsqadvlh vcadeqgnss rgptpgspnq advlmvyaaa egcvayrdek
      361 gsdfiqtlve vlradpkadl lelmtevnrq vceldvlgpd cderrkvcle irsslrrrlc
      421 lqi
//
LOCUS       XP_061009926             312 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 2C1 [Dama dama].
ACCESSION   XP_061009926
VERSION     XP_061009926.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153943.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..312
                     /product="olfactory receptor 2C1"
                     /calculated_mol_wt=34771
     Region          25..294
                     /region_name="7tmA_OR2B-like"
                     /note="olfactory receptor subfamily 2B and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15947"
                     /db_xref="CDD:320613"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320613"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320613"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,252,255..256,258..259,262,
                     268..269,271..273,276,279..280)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320613"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320613"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320613"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320613"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320613"
     Region          269..294
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320613"
     CDS             1..312
                     /gene="LOC133064001"
                     /coded_by="XM_061153943.1:1..939"
                     /db_xref="GeneID:133064001"
ORIGIN      
        1 meranssswe gfilmgvsdy pqlemiffvg ilfsylltlf gnsaiillss ldarlhtpmy
       61 fflsnlssvd lafttssvpq mlinlwgadk tisyggcvtq lyvflwlgvt ecillvvmaf
      121 drfvavcrpl hyttmmnpqr cwllaaiawl gglgnsvvqs tftlqlplcg hrrvdsflce
      181 vpamiklacv dkslneavln nvcmfftavp lsiilisycc iaqavlkirs aegrrkafnt
      241 clshlvvvll fygsaiygyl lpaktnkqdq gkfislfysv vtpmvnpliy tlrnkevkra
      301 lrrllgkgre vs
//
LOCUS       XP_061009927              82 aa            linear   MAM 02-DEC-2023
DEFINITION  cytochrome c oxidase subunit NDUFA4 [Dama dama].
ACCESSION   XP_061009927
VERSION     XP_061009927.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153944.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..82
                     /product="cytochrome c oxidase subunit NDUFA4"
                     /calculated_mol_wt=9166
     Region          11..78
                     /region_name="B12D"
                     /note="NADH-ubiquinone reductase complex 1 MLRQ subunit;
                     pfam06522"
                     /db_xref="CDD:461937"
     CDS             1..82
                     /gene="LOC133064002"
                     /coded_by="XM_061153944.1:123..371"
                     /db_xref="GeneID:133064002"
ORIGIN      
        1 mlrqiigqak khpsliplfi figaggtgaa lyvtrlalfn pdvswdrknn pepwnklgpn
       61 dqykfysvnv dysklkkegp df
//
LOCUS       XP_061009929             431 aa            linear   MAM 02-DEC-2023
DEFINITION  sarcalumenin [Dama dama].
ACCESSION   XP_061009929
VERSION     XP_061009929.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153946.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..431
                     /product="sarcalumenin"
                     /calculated_mol_wt=49691
     Region          17..49
                     /region_name="EHD_N"
                     /note="N-terminal EH-domain containing protein; pfam16880"
                     /db_xref="CDD:465295"
     Region          53..294
                     /region_name="EHD"
                     /note="Eps15 homology domain (EHD), C-terminal domain;
                     cd09913"
                     /db_xref="CDD:206740"
     Site            58..65
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206740"
     Site            order(63..66,148,214,216,250..252)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206740"
     Site            89
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206740"
     Site            93..95
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206740"
     Site            148..151
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206740"
     Site            order(150..151,177..178)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206740"
     Site            213..216
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206740"
     Site            250..252
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206740"
     CDS             1..431
                     /gene="LOC133064003"
                     /coded_by="XM_061153946.1:114..1409"
                     /db_xref="GeneID:133064003"
ORIGIN      
        1 mlnedkpadd fsvvlqrlrk iyhssikple qsykynelrq heitdgeits kpmvlflgpw
       61 svgkstminy llglentryq lytgaeptts eftvlmhgpk lktiegivma adsarsfspl
      121 ekfgqnflek ligievphkl lervtfvdtp giienrkqqe rgypfndvcq wfidradlif
      181 vvfdptkldv glelemlfrq lkgresqiri ilnkadnlat qmlmrvygal fwslaplinv
      241 tepprvyvss fwpydykpdt hrdlflreei slledlnqvi enrlenkiaf irqhairvri
      301 hallvdrylq tykekmtffs dgelvfkdiv edpdkfyifk tilaktnvsk fdlphreayk
      361 dffginpiss fkllsqqcsy mggcfldkie raitqelpsl lgslglgknp galncdktgc
      421 getpknrykk p
//
LOCUS       XP_061009930             365 aa            linear   MAM 02-DEC-2023
DEFINITION  septin-12 [Dama dama].
ACCESSION   XP_061009930
VERSION     XP_061009930.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153947.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..365
                     /product="septin-12"
                     /calculated_mol_wt=41307
     Region          45..316
                     /region_name="CDC_Septin"
                     /note="CDC/Septin GTPase family; cd01850"
                     /db_xref="CDD:206649"
     Site            55..62
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206649"
     Site            order(57..63,111,114,193..194,196,250..251)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206649"
     Site            86..94
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206649"
     Site            88
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206649"
     Site            111..114
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206649"
     Site            113..159
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206649"
     Site            193..196
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206649"
     Site            250..252
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206649"
     CDS             1..365
                     /gene="SEPTIN12"
                     /coded_by="XM_061153947.1:1..1098"
                     /db_xref="GeneID:133064005"
ORIGIN      
        1 mdplrqspsp sssqassprt lscerlgyvg ieavldqlki kamkmgfefn imvvgqsglg
       61 kstmvntlfk skiwkstmpg lrvptpqtlq lhsmthviee ngvklkltvt dtpgfgdqin
      121 ndkcwdpilg yineqyeryl qeeilitrqr ripdtrvhcc iyfvpptghc lrpldleflq
      181 rlcravnvvp viaradslti eereafrhri qddlkthsie vypqkcfded vndkilnski
      241 reripfavvg adrehmvngr cvlgrktkwg iievenmahc efpllrdlli rshlqdlkdi
      301 thnvhyenyr ivrlkeshal prgpgwvnla papspapgpa ptgtraspgp akvcrwaedn
      361 sdedf
//
LOCUS       XP_061009931             361 aa            linear   MAM 02-DEC-2023
DEFINITION  UPF0764 protein C16orf89 homolog [Dama dama].
ACCESSION   XP_061009931
VERSION     XP_061009931.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153948.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..361
                     /product="UPF0764 protein C16orf89 homolog"
                     /calculated_mol_wt=40641
     Region          60..340
                     /region_name="DUF4735"
                     /note="Domain of unknown function (DUF4735); pfam15882"
                     /db_xref="CDD:464922"
     CDS             1..361
                     /gene="C10H16orf89"
                     /coded_by="XM_061153948.1:1..1086"
                     /db_xref="GeneID:133064006"
ORIGIN      
        1 msspglplll lllaapplqp swlpppdtpe gkatitgfil saldratsfl kkrlpeinld
       61 gvlgfrmlev qlkgvqekwa qdsqlqplgl rvgklvekla pllhdsifyl nlsdpkylre
      121 fqltiepgfw klprawtrte asmvyptfeq edsfseelsd lclvqllgtg tnssqpcrls
      181 nfcrtfmtrp gcsgyclshq llfflsarmr gctkglfrqs qhymnifcan mmdlnrrada
      241 igyayptrdv fmenivlcgm sgfsdfyklr wlqailswqk pregcfgepa aedeelpeai
      301 qyqqhflrrv krrekqfadg csshntamav aalggflyvl aeyppaegkl rpptmtppag
      361 h
//
LOCUS       XP_061009932              64 aa            linear   MAM 02-DEC-2023
DEFINITION  translation machinery-associated protein 7-like [Dama dama].
ACCESSION   XP_061009932
VERSION     XP_061009932.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153949.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..64
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..64
                     /product="translation machinery-associated protein 7-like"
                     /calculated_mol_wt=6963
     Region          3..64
                     /region_name="TMA7"
                     /note="Translation machinery associated TMA7; pfam09072"
                     /db_xref="CDD:462671"
     CDS             1..64
                     /gene="LOC133064007"
                     /coded_by="XM_061153949.1:16..210"
                     /db_xref="GeneID:133064007"
ORIGIN      
        1 msgreggkkk plkqpkkqak emdeedkvfk qkqkeeqkkl eelkakaagk gplatggikk
       61 sgkk
//
LOCUS       XP_061009933             447 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA binding protein fox-1 homolog 1 isoform X1 [Dama dama].
ACCESSION   XP_061009933
VERSION     XP_061009933.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153950.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..447
                     /product="RNA binding protein fox-1 homolog 1 isoform X1"
                     /calculated_mol_wt=47896
     Region          <37..171
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          141..216
                     /region_name="RRM_FOX1_like"
                     /note="RNA recognition motif (RRM) found in vertebrate RNA
                     binding protein fox-1 homologs and similar proteins;
                     cd12407"
                     /db_xref="CDD:409841"
     Site            order(142,144,146..151,171..175,177..182,184,208,213..216)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:409841"
     Region          277..367
                     /region_name="Fox-1_C"
                     /note="Calcitonin gene-related peptide regulator C
                     terminal; pfam12414"
                     /db_xref="CDD:463568"
     CDS             1..447
                     /gene="LOC133064008"
                     /coded_by="XM_061153950.1:1..1344"
                     /db_xref="GeneID:133064008"
ORIGIN      
        1 mqhpltgatc valpnvgmcp qlscaltfmy lqqgnqeaaa apdtmaqpya saqfappqng
       61 ipaeytaphp hpapeytgqt tvpehtlnly ppaqshseqs aadtsahtvs gtatqtddaa
      121 ptdgqpqtqp sentenksqp krlhvsnipf rfrdpdlrqm fgqfgkildv eiifnergsk
      181 gfgfvtfens adadrarekl hgtvvegrki evnnatarvm tnkktvnpyt ngwklnpvvg
      241 avyspefyag tvllcqanqe gssmysapss lvytsampgf pypaataaaa yrgahlrgrg
      301 rtvyntfraa appppipayg gvvyqdgfyg adiyggyaay ryaqptpata aaysdrnqfv
      361 fvaadeiscn tsavtdefml ptpttthllq ppptalvpcp kvpappqtse elsctvpghc
      421 cqaaenlpas ppllqfmfkv ivaqerk
//
LOCUS       XP_061009934             406 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA binding protein fox-1 homolog 1 isoform X2 [Dama dama].
ACCESSION   XP_061009934
VERSION     XP_061009934.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153951.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..406
                     /product="RNA binding protein fox-1 homolog 1 isoform X2"
                     /calculated_mol_wt=43288
     Region          <37..171
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          141..216
                     /region_name="RRM_FOX1_like"
                     /note="RNA recognition motif (RRM) found in vertebrate RNA
                     binding protein fox-1 homologs and similar proteins;
                     cd12407"
                     /db_xref="CDD:409841"
     Site            order(142,144,146..151,171..175,177..182,184,208,213..216)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:409841"
     Region          277..366
                     /region_name="Fox-1_C"
                     /note="Calcitonin gene-related peptide regulator C
                     terminal; pfam12414"
                     /db_xref="CDD:463568"
     CDS             1..406
                     /gene="LOC133064008"
                     /coded_by="XM_061153951.1:1..1221"
                     /db_xref="GeneID:133064008"
ORIGIN      
        1 mqhpltgatc valpnvgmcp qlscaltfmy lqqgnqeaaa apdtmaqpya saqfappqng
       61 ipaeytaphp hpapeytgqt tvpehtlnly ppaqshseqs aadtsahtvs gtatqtddaa
      121 ptdgqpqtqp sentenksqp krlhvsnipf rfrdpdlrqm fgqfgkildv eiifnergsk
      181 gfgfvtfens adadrarekl hgtvvegrki evnnatarvm tnkktvnpyt ngwklnpvvg
      241 avyspefyag tvllcqanqe gssmysapss lvytsampgf pypaataaaa yrgahlrgrg
      301 rtvyntfraa appppipayg gvvyqdgfyg adiyggyaay ryaqptpata aaysdsygrv
      361 yatdpyhhtl apaptygvga mpqgsspttd lrgaklhssr pllpgs
//
LOCUS       XP_061009935             421 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA binding protein fox-1 homolog 1 isoform X3 [Dama dama].
ACCESSION   XP_061009935
VERSION     XP_061009935.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153952.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..421
                     /product="RNA binding protein fox-1 homolog 1 isoform X3"
                     /calculated_mol_wt=45072
     Region          <37..171
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          141..216
                     /region_name="RRM_FOX1_like"
                     /note="RNA recognition motif (RRM) found in vertebrate RNA
                     binding protein fox-1 homologs and similar proteins;
                     cd12407"
                     /db_xref="CDD:409841"
     Site            order(142,144,146..151,171..175,177..182,184,208,213..216)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:409841"
     Region          277..366
                     /region_name="Fox-1_C"
                     /note="Calcitonin gene-related peptide regulator C
                     terminal; pfam12414"
                     /db_xref="CDD:463568"
     CDS             1..421
                     /gene="LOC133064008"
                     /coded_by="XM_061153952.1:1..1266"
                     /db_xref="GeneID:133064008"
ORIGIN      
        1 mqhpltgatc valpnvgmcp qlscaltfmy lqqgnqeaaa apdtmaqpya saqfappqng
       61 ipaeytaphp hpapeytgqt tvpehtlnly ppaqshseqs aadtsahtvs gtatqtddaa
      121 ptdgqpqtqp sentenksqp krlhvsnipf rfrdpdlrqm fgqfgkildv eiifnergsk
      181 gfgfvtfens adadrarekl hgtvvegrki evnnatarvm tnkktvnpyt ngwklnpvvg
      241 avyspefyag tvllcqanqe gssmysapss lvytsampgf pypaataaaa yrgahlrgrg
      301 rtvyntfraa appppipayg gvvyqdgfyg adiyggyaay ryaqptpata aaysdsygrv
      361 yatdpyhhtl apaptygvga mnafapltda ktrshaddvg lvlsslqasi yrggynrfap
      421 y
//
LOCUS       XP_061009936             399 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA binding protein fox-1 homolog 1 isoform X4 [Dama dama].
ACCESSION   XP_061009936
VERSION     XP_061009936.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153953.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..399
                     /product="RNA binding protein fox-1 homolog 1 isoform X4"
                     /calculated_mol_wt=42795
     Region          <10..190
                     /region_name="ELAV_HUD_SF"
                     /note="ELAV/HuD family splicing factor; TIGR01661"
                     /db_xref="CDD:273741"
     Region          119..194
                     /region_name="RRM_FOX1_like"
                     /note="RNA recognition motif (RRM) found in vertebrate RNA
                     binding protein fox-1 homologs and similar proteins;
                     cd12407"
                     /db_xref="CDD:409841"
     Site            order(120,122,124..129,149..153,155..160,162,186,191..194)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:409841"
     Region          255..344
                     /region_name="Fox-1_C"
                     /note="Calcitonin gene-related peptide regulator C
                     terminal; pfam12414"
                     /db_xref="CDD:463568"
     CDS             1..399
                     /gene="LOC133064008"
                     /coded_by="XM_061153953.1:23..1222"
                     /db_xref="GeneID:133064008"
ORIGIN      
        1 meekgsrmvp qgnqeaaaap dtmaqpyasa qfappqngip aeytaphphp apeytgqttv
       61 pehtlnlypp aqshseqsaa dtsahtvsgt atqtddaapt dgqpqtqpse ntenksqpkr
      121 lhvsnipfrf rdpdlrqmfg qfgkildvei ifnergskgf gfvtfensad adrareklhg
      181 tvvegrkiev nnatarvmtn kktvnpytng wklnpvvgav yspefyagtv llcqanqegs
      241 smysapsslv ytsampgfpy paataaaayr gahlrgrgrt vyntfraaap pppipayggv
      301 vyqdgfygad iyggyaayry aqptpataaa ysdsygrvya tdpyhhtlap aptygvgamn
      361 afapltdakt rshaddvglv lsslqasiyr ggynrfapy
//
LOCUS       XP_061009937             223 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 114 isoform X1 [Dama dama].
ACCESSION   XP_061009937
VERSION     XP_061009937.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153954.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..223
                     /product="transmembrane protein 114 isoform X1"
                     /calculated_mol_wt=23815
     Region          19..208
                     /region_name="PMP22_Claudin"
                     /note="PMP-22/EMP/MP20/Claudin family; cl21598"
                     /db_xref="CDD:473919"
     CDS             1..223
                     /gene="TMEM114"
                     /coded_by="XM_061153954.1:1..672"
                     /db_xref="GeneID:133064010"
ORIGIN      
        1 mrvhlgalag aaaltgalsf vllaaaigtd fwyiidterl erggpgawgp agaanrsqle
       61 plsshsglwr tcrvqspcap lmnpfwqenv tvsdssrqll tmhgtfvill plslilmvfg
      121 gmtgflsfll rascllvltg tlflfgalvt lagisvyiay saaafrealc llqektllaq
      181 vdirfgwsla lgwvscvael ltgatflvaa rvlslrrred qai
//
LOCUS       XP_061009939             177 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 114 isoform X2 [Dama dama].
ACCESSION   XP_061009939
VERSION     XP_061009939.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153956.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..177
                     /product="transmembrane protein 114 isoform X2"
                     /calculated_mol_wt=18900
     Region          19..162
                     /region_name="PMP22_Claudin"
                     /note="PMP-22/EMP/MP20/Claudin family; cl21598"
                     /db_xref="CDD:473919"
     CDS             1..177
                     /gene="TMEM114"
                     /coded_by="XM_061153956.1:1..534"
                     /db_xref="GeneID:133064010"
ORIGIN      
        1 mrvhlgalag aaaltgalsf vllaaaigtd fwyiidterl erggpgawgp agaanrsqle
       61 plsshsglwr tcrvqspcap lmnpfwqenv tvsdssrqll tlvtlagisv yiaysaaafr
      121 ealcllqekt llaqvdirfg wslalgwvsc vaelltgatf lvaarvlslr rredqai
//
LOCUS       XP_061009940             125 aa            linear   MAM 02-DEC-2023
DEFINITION  small ribosomal subunit protein eS25-like [Dama dama].
ACCESSION   XP_061009940
VERSION     XP_061009940.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153957.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..125
                     /product="small ribosomal subunit protein eS25-like"
                     /calculated_mol_wt=13624
     Region          19..111
                     /region_name="Ribosomal_S25"
                     /note="S25 ribosomal protein; pfam03297"
                     /db_xref="CDD:460876"
     CDS             1..125
                     /gene="LOC133064011"
                     /coded_by="XM_061153957.1:46..423"
                     /db_xref="GeneID:133064011"
ORIGIN      
        1 mppkdkkkkk dagksakkdk dpvnksggka kkkkwskgkv rdklnnlvlf dkatydklck
       61 evpnyklitp avvserlkir gslaraalqe llskgliklv skhraqviyt rntkggdapa
      121 ageda
//
LOCUS       XP_061009941             686 aa            linear   MAM 02-DEC-2023
DEFINITION  activating transcription factor 7-interacting protein 2 [Dama
            dama].
ACCESSION   XP_061009941
VERSION     XP_061009941.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153958.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..686
                     /product="activating transcription factor 7-interacting
                     protein 2"
                     /calculated_mol_wt=76694
     Region          295..503
                     /region_name="ATF7IP_BD"
                     /note="ATF-interacting protein binding domain; pfam16788"
                     /db_xref="CDD:465271"
     Region          578..677
                     /region_name="fn3_4"
                     /note="Fibronectin-III type domain; pfam16794"
                     /db_xref="CDD:465273"
     CDS             1..686
                     /gene="ATF7IP2"
                     /coded_by="XM_061153958.1:183..2243"
                     /db_xref="GeneID:133064012"
ORIGIN      
        1 maspdgskrk ilkakktmpv scrkqveiln ksrnvealkt aaiennissg nensstavis
       61 skcrhsenda sslnsiknsv cepkskefsq nlikpleitd setrleytee qvvypcekps
      121 ktvefprklf iheakdsqnt tenhfecqas vtrsffehee dcnlksichl ssvlsgivqi
      181 pkstktntld dkridkivsy leanssaely dkkqsdilif ssddpfvpad kipklvnsvi
      241 ssncaddilk seesyrnyls silscenlda kwlssldtds nnshnqkkrm fsenkenvkr
      301 vktseqinen isvalekqta lleqvrllvr qeicsinykl fdsklrelte rigktqctnk
      361 heatadklfa kiaklerrvk avlpqrhcve pnvvsnntac kvansetmil dknpesvnsp
      421 qerktvkset cnpsekssgk inwsldhnea vsesnddvll isvenlnlkt pvtsnltatg
      481 kitsgnsnss anaekramai ekkhdsvidl tkedlsncnt espvstlesr mkavsvsket
      541 tpvsqnaaqv resfehlppl pepppllpel vdkirdtlpp qkpelkvkrv lrpkgialtw
      601 nitkinpkca pvesyhlflc hespsnqliw kkigeikalp lpmactlsqf lasrkyyftv
      661 qskdifgryg pfcdiksipg fsenlt
//
LOCUS       XP_061009942             489 aa            linear   MAM 02-DEC-2023
DEFINITION  tektin-5 [Dama dama].
ACCESSION   XP_061009942
VERSION     XP_061009942.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153959.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..489
                     /product="tektin-5"
                     /calculated_mol_wt=56490
     Region          98..480
                     /region_name="Tektin"
                     /note="Tektin family; pfam03148"
                     /db_xref="CDD:460827"
     CDS             1..489
                     /gene="TEKT5"
                     /coded_by="XM_061153959.1:1..1470"
                     /db_xref="GeneID:133064013"
ORIGIN      
        1 meflgttqta tycgpkkpcg mstlptvasg ptvqecyqpy ylpgyrylns wrpslfykva
       61 naqtcldega tcrsavrppt ilpavrsalf cryspqdwdq snrlqlrgae asrlwagrmt
      121 gdsmrlmqdk dqltrqmqeg tcrnlgqrls digfwkseln yelerllnen hsldaikrrl
      181 ecaaeelrcp lqvaleclyq rekrigidlv hdnveknliq evdmikccqe qmrklaqrid
      241 iqmrdnrdaq halerdledk nsaefidekc lnlrntsdci sffhgvekid gtisvpetwa
      301 kfsndnirhs qnmransirl reeaqnlfdv ladqlwrqfi ntnlafnari aeetevknkl
      361 qtqlaktlqe ifqtentiml lersimakec plkvaqtrle crtrrpnvel crdtaqfklv
      421 nevftiddtl qtlklrlret rdtlqllvmt kcrlehelai kantlcidke kcmamrktfp
      481 stpcmgicp
//
LOCUS       XP_061009943             132 aa            linear   MAM 02-DEC-2023
DEFINITION  nuclear transition protein 2 [Dama dama].
ACCESSION   XP_061009943
VERSION     XP_061009943.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153960.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..132
                     /product="nuclear transition protein 2"
                     /calculated_mol_wt=15035
     Region          1..128
                     /region_name="TP2"
                     /note="Nuclear transition protein 2; pfam01254"
                     /db_xref="CDD:426159"
     CDS             1..132
                     /gene="TNP2"
                     /coded_by="XM_061153960.1:141..539"
                     /db_xref="GeneID:133064014"
ORIGIN      
        1 mdtktqslpn thtqphsnsr pqshackqcs cshhcqsrsr scrsrsrsss qrprshrspa
       61 ghqgrspgps pplrhlryam hshqcpsrpv thscshsknr knlegkvikr kqvkrskqvy
      121 krkrqssgrk yn
//
LOCUS       XP_061009944              97 aa            linear   MAM 02-DEC-2023
DEFINITION  protamine-3 [Dama dama].
ACCESSION   XP_061009944
VERSION     XP_061009944.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153961.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..97
                     /product="protamine-3"
                     /calculated_mol_wt=10561
     CDS             1..97
                     /gene="PRM3"
                     /coded_by="XM_061153961.1:1..294"
                     /db_xref="GeneID:133064015"
ORIGIN      
        1 mgsrcakigm ghgrgheysm kklvacvsqd nfslssegee eeegeeeeee eeeeegeeee
       61 lpvqgklllm eagqqeegae dtdsgaqqsp epkqtrs
//
LOCUS       XP_061009945              94 aa            linear   MAM 02-DEC-2023
DEFINITION  protamine-2 [Dama dama].
ACCESSION   XP_061009945
VERSION     XP_061009945.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153962.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..94
                     /product="protamine-2"
                     /calculated_mol_wt=11575
     Region          1..>58
                     /region_name="Protamine_P2"
                     /note="Sperm histone P2; pfam00841"
                     /db_xref="CDD:459959"
     CDS             1..94
                     /gene="PRM2"
                     /coded_by="XM_061153962.1:1..285"
                     /db_xref="GeneID:133064016"
ORIGIN      
        1 mvrcrvkspi esppgqqgsg qqgeterpdq arelrpedip vygrthrgry hyrhrshtrr
       61 rpcrrrrrra crhrrrrrgc rrmkrrrrrc grql
//
LOCUS       XP_061009947             178 aa            linear   MAM 02-DEC-2023
DEFINITION  tumor necrosis factor receptor superfamily member 17 [Dama dama].
ACCESSION   XP_061009947
VERSION     XP_061009947.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153964.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..178
                     /product="tumor necrosis factor receptor superfamily
                     member 17"
                     /calculated_mol_wt=19644
     Region          1..160
                     /region_name="TNFRSF17"
                     /note="Tumor necrosis factor receptor superfamily member
                     17 (TNFRSF17), also known as B cell maturation antigen
                     (BCMA), as well as TNFRSF13A; cd13414"
                     /db_xref="CDD:276919"
     Region          1..18
                     /region_name="CRD1"
                     /note="CRD1 [structural motif]"
                     /db_xref="CDD:276919"
     Region          21..120
                     /region_name="CRD2"
                     /note="CRD2 [structural motif]"
                     /db_xref="CDD:276919"
     CDS             1..178
                     /gene="TNFRSF17"
                     /coded_by="XM_061153964.1:159..695"
                     /db_xref="GeneID:133064018"
ORIGIN      
        1 maqrcspney fdrllntcks cqlrcpntpp vicqhycntm kgtntflwtc lglslivslt
       61 vfvlmfllrk msseplkdkl kntgavlqkn anadldvsnn ssivaeplls rglgytieec
      121 mcedcvrskl kvdsdhffpl pameegatil vttktndycd sllattsvtg meksiptr
//
LOCUS       XP_061009948             425 aa            linear   MAM 02-DEC-2023
DEFINITION  protein shisa-9 isoform X1 [Dama dama].
ACCESSION   XP_061009948
VERSION     XP_061009948.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153965.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..425
                     /product="protein shisa-9 isoform X1"
                     /calculated_mol_wt=46835
     Region          71..252
                     /region_name="Shisa"
                     /note="Wnt and FGF inhibitory regulator; pfam13908"
                     /db_xref="CDD:464036"
     CDS             1..425
                     /gene="SHISA9"
                     /coded_by="XM_061153965.1:1..1278"
                     /db_xref="GeneID:133064019"
ORIGIN      
        1 mrrvlrlllg cfltelcarv craqeraghg qlaqlggvvv ltggnrsgaa sgevgegvgv
       61 sdapptrapt pdfcrgyfdv mgqwdppfnc ssgdfifccg tcgfrfcctf kkrrlnqstc
      121 tnydtplwln tgkpparkdd plhdptkdkt nlivyiicgv vavmvlvgif tklglekahr
      181 pqrehmsral advmrpqghc ntdhmerdln ivvhvqhyen mdtrtpinnl httqmnnavp
      241 tspllqqmgh phsypslgqi snpyeqqppg kelnkyaslk avgssegdwt vatlkspkad
      301 kvnddfyskr rhlaelaakg nlplhpvrve deprafspeh gpakqngqks rtnktpphpl
      361 aynstanfks wdpkdqslrr qqaygnkgkl gtaesgssdp lgtrtphypp pqpyfitnsk
      421 tevtv
//
LOCUS       XP_061009949             409 aa            linear   MAM 02-DEC-2023
DEFINITION  protein shisa-9 isoform X2 [Dama dama].
ACCESSION   XP_061009949
VERSION     XP_061009949.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153966.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..409
                     /product="protein shisa-9 isoform X2"
                     /calculated_mol_wt=45190
     Region          71..252
                     /region_name="Shisa"
                     /note="Wnt and FGF inhibitory regulator; pfam13908"
                     /db_xref="CDD:464036"
     CDS             1..409
                     /gene="SHISA9"
                     /coded_by="XM_061153966.1:1..1230"
                     /db_xref="GeneID:133064019"
ORIGIN      
        1 mrrvlrlllg cfltelcarv craqeraghg qlaqlggvvv ltggnrsgaa sgevgegvgv
       61 sdapptrapt pdfcrgyfdv mgqwdppfnc ssgdfifccg tcgfrfcctf kkrrlnqstc
      121 tnydtplwln tgkpparkdd plhdptkdkt nlivyiicgv vavmvlvgif tklglekahr
      181 pqrehmsral advmrpqghc ntdhmerdln ivvhvqhyen mdtrtpinnl httqmnnavp
      241 tspllqqmgh phsypslgqi snpyeqqppg kelnkyaslk avadkvnddf yskrrhlael
      301 aakgnlplhp vrvedepraf spehgpakqn gqksrtnktp phplaynsta nfkswdpkdq
      361 slrrqqaygn kgklgtaesg ssdplgtrtp hypppqpyfi tnsktevtv
//
LOCUS       XP_061009950             210 aa            linear   MAM 02-DEC-2023
DEFINITION  SAP domain-containing ribonucleoprotein-like [Dama dama].
ACCESSION   XP_061009950
VERSION     XP_061009950.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153967.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..210
                     /product="SAP domain-containing ribonucleoprotein-like"
                     /calculated_mol_wt=23545
     Region          7..>90
                     /region_name="PLN03124"
                     /note="poly [ADP-ribose] polymerase; Provisional"
                     /db_xref="CDD:215591"
     Region          8..42
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     CDS             1..210
                     /gene="LOC133064022"
                     /coded_by="XM_061153967.1:7..639"
                     /db_xref="GeneID:133064022"
ORIGIN      
        1 matetvelhk lklaelkqec largletkgi kqdlinrlqa yleehaeeea neeevlgdet
       61 eeeepktlel pvkeeeppek tvdvaaekkv vkitseipqt ermqkrderf nvpvsleskk
      121 aaratrfgis pvpskglssd trpmvnldkl keraqrfgls vssisrksed deklkkrker
      181 fgivtssagt gttedteakq rqraercgia
//
LOCUS       XP_061009951             186 aa            linear   MAM 02-DEC-2023
DEFINITION  C-type lectin domain family 19 member A [Dama dama].
ACCESSION   XP_061009951
VERSION     XP_061009951.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153968.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..186
                     /product="C-type lectin domain family 19 member A"
                     /calculated_mol_wt=21280
     Region          40..180
                     /region_name="CLECT_CEL-1_like"
                     /note="C-type lectin-like domain (CTLD) of the type found
                     in CEL-1 from Cucumaria echinata and Echinoidin from
                     Anthocidaris crassispina; cd03589"
                     /db_xref="CDD:153059"
     Site            order(41..42,48,71,73)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153059"
     Site            order(113,117,140,149..150)
                     /site_type="other"
                     /note="calcium binding site 1 [ion binding]"
                     /db_xref="CDD:153059"
     Site            order(117,150)
                     /site_type="other"
                     /note="calcium binding site 3 [ion binding]"
                     /db_xref="CDD:153059"
     Site            order(137,139,149,155,166..167)
                     /site_type="other"
                     /note="carbohydrate binding [chemical binding]"
                     /db_xref="CDD:153059"
     CDS             1..186
                     /gene="CLEC19A"
                     /coded_by="XM_061153968.1:1..561"
                     /db_xref="GeneID:133064027"
ORIGIN      
        1 mqkwglwtas iltllsaqaf pqtdinispa mpelpqaslc plfwmefkgh cyrffplnkt
       61 waeadfycse fsigrksakl asihsweenv fvydlvnscv pgipadiwtg lhdhrqegkf
      121 ewtdgspydy sywdgsqpdd gvhadpeeed cvqiwyrpts alrswndntc srkfpfvcki
      181 aaltih
//
LOCUS       XP_061009954             474 aa            linear   MAM 02-DEC-2023
DEFINITION  synaptotagmin-17 [Dama dama].
ACCESSION   XP_061009954
VERSION     XP_061009954.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153971.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..474
                     /product="synaptotagmin-17"
                     /calculated_mol_wt=53628
     Region          186..314
                     /region_name="C2A_Synaptotagmin-15-17"
                     /note="C2A domain first repeat present in Synaptotagmins
                     15 and 17; cd08390"
                     /db_xref="CDD:176036"
     Region          323..457
                     /region_name="C2B_Synaptotagmin-17"
                     /note="C2 domain second repeat present in Synaptotagmin
                     17; cd08410"
                     /db_xref="CDD:176055"
     CDS             1..474
                     /gene="SYT17"
                     /coded_by="XM_061153971.1:218..1642"
                     /db_xref="GeneID:133064028"
ORIGIN      
        1 mayiqlepln egllsrisdl llcrwtcrhc cqkcyesscc qssedeveil gpfpaqtppw
       61 llasrssdkd gdsvhtasdv pltprtnspd rrcsssdtsk stysltrris sldsrrpssp
      121 lidikpiefg vlsakkepiq psvlrrtytp ddyfrkfeph lysldsnsdd vdfltdaeil
      181 skyqlgmlhf stqydllhnh ltvrvieard lpppishdga rqdmahsnpy vkicllpdqk
      241 nskqtgvkrk tqkpvfeery tfeipfleaq rrtllltvld fdkfsrhcvi gkvavplcev
      301 dlvkgghwwk alipssqnev elgelllsln ylpsagrlnv dvirakqllq tdvsqgsdpf
      361 vkiqlvhglk lvktkktsfl rgtidpfyne sfsfkvpqee lenaslvftv fghnmkssnd
      421 figrvvigqy ssgpsesnhw rrmlsahrta veqwhslrsr aecdrvspas levt
//
LOCUS       XP_061009955             352 aa            linear   MAM 02-DEC-2023
DEFINITION  probable G-protein coupled receptor 139 [Dama dama].
ACCESSION   XP_061009955
VERSION     XP_061009955.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153972.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..352
                     /product="probable G-protein coupled receptor 139"
                     /calculated_mol_wt=40276
     Region          26..295
                     /region_name="7tmA_GPR139"
                     /note="G-protein-coupled receptor GPR139, member of the
                     class A family of seven-transmembrane G protein-coupled
                     receptors; cd15919"
                     /db_xref="CDD:320585"
     Region          27..53
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320585"
     Region          61..86
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320585"
     Site            order(83,86..87,100..105,107..108,111,156,158..162,179,
                     182..184,186..188,190..191,240,243..244,246..247,250,
                     262..263,265..267,270,273..274)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320585"
     Region          100..130
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320585"
     Region          142..162
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320585"
     Region          179..204
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320585"
     Region          220..252
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320585"
     Region          263..288
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320585"
     CDS             1..352
                     /gene="GPR139"
                     /coded_by="XM_061153972.1:1..1059"
                     /db_xref="GeneID:133064030"
ORIGIN      
        1 mehthahlaa nssqswspgs acglgfvpvv yyslllclgl paniltviil sqlvarrqks
       61 synyllalaa adilvlffiv fvdflledfi lnmqmpqvpd kiievlefss ihtsiwitvp
      121 ltidryiavc hplkyhtvsy partrkvivs vyvtcfltsi pyywwpnlwt edyvstsvhh
      181 vliwihcftv ylvpcsiffi lnsiivyklr rksnfrlrgy stgkttailf titsifatlw
      241 apriimilyh lygapiqnpw lvhimsdvan mlallntain fflycfiskr frtmaaatlk
      301 affkcqkqpv qfytnhnfsi tsspwispan shcikmlvyq ydkngkpikv sp
//
LOCUS       XP_061009956             161 aa            linear   MAM 02-DEC-2023
DEFINITION  ATP synthase subunit d, mitochondrial [Dama dama].
ACCESSION   XP_061009956
VERSION     XP_061009956.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153973.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..161
                     /product="ATP synthase subunit d, mitochondrial"
                     /calculated_mol_wt=18517
     Region          3..155
                     /region_name="Mt_ATP-synt_D"
                     /note="ATP synthase D chain, mitochondrial (ATP5H);
                     pfam05873"
                     /db_xref="CDD:461764"
     CDS             1..161
                     /gene="LOC133064031"
                     /coded_by="XM_061153973.1:42..527"
                     /db_xref="GeneID:133064031"
ORIGIN      
        1 magrklalkt idwvafgeii prnqkavans lkswnetlts rlatlpekpp aidwayykan
       61 vakaglvddf ekkfnalkvp ipedkytaqv daeekedvks caeflaqskt riqeyekele
      121 kmrniipfdq mtiedlnevf petkldkkky pywphrpies l
//
LOCUS       XP_061009957             577 aa            linear   MAM 02-DEC-2023
DEFINITION  protein disulfide-isomerase-like protein of the testis [Dama dama].
ACCESSION   XP_061009957
VERSION     XP_061009957.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153974.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..577
                     /product="protein disulfide-isomerase-like protein of the
                     testis"
                     /calculated_mol_wt=66619
     Region          43..501
                     /region_name="ER_PDI_fam"
                     /note="protein disulfide isomerase, eukaryotic; TIGR01130"
                     /db_xref="CDD:273457"
     CDS             1..577
                     /gene="PDILT"
                     /coded_by="XM_061153974.1:1..1734"
                     /db_xref="GeneID:133064032"
ORIGIN      
        1 mevlwvslll vvscvgtvqg spkmngknes idmsqplhil veenlmvltp pgltqmlnet
       61 rflmvlfhnp sskqsrslae elgkaveimg kgkngigfgk vditvekelr kefdvkkape
      121 lklffegnrs qpiscqgvve stalvvwlrr qisqkaflfs dsseiaefvn srplvivgff
      181 qdleeevael fydmikdfpe ltfgailirh aigryhvtld svivfkkgri vnrqelindn
      241 vnkqilnkli keqltdfvie yntenrdliy elnilnhmll fvskssesfr mimqhyklas
      301 kifqnkilfi lvdtdvprnr rvfkyfqisd vdvpciqiln lssdarykmp feeityenlq
      361 rfgqsflsrk akkhlsseei pnywdqgpvk qlvgknfnvv vfdkerdvfv mfyapwsqkc
      421 mvlfpvleel grkyqnhstv tiakiditan diqltyqdry pffrlfpads qkdvqyngey
      481 tlkgfsdfle sqikiqieve dellsieese etekevlaee keeafmkkel peqnlpelen
      541 vtklegpaeq kekaeekaae pkeppsqgke prvkeel
//
LOCUS       XP_061009958             208 aa            linear   MAM 02-DEC-2023
DEFINITION  acyl-coenzyme A synthetase ACSM5, mitochondrial [Dama dama].
ACCESSION   XP_061009958
VERSION     XP_061009958.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153975.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..208
                     /product="acyl-coenzyme A synthetase ACSM5, mitochondrial"
                     /calculated_mol_wt=23362
     Region          49..>208
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     CDS             1..208
                     /gene="ACSM5"
                     /coded_by="XM_061153975.1:1..627"
                     /db_xref="GeneID:133064033"
ORIGIN      
        1 mrlwlrelvl halrnargic gshgqplplp vpekivatwe aislgrqpvp eyfnfahdvl
       61 dvwsqlekag hrppipafww vdgtgaevkw sfeelgeqsr kaanvlerac glqpgdrmml
      121 vlprlpewwl vsvacmrtga imipgisqlt ekdlkfrlqa sraksiitsd slaprvdais
      181 sdcpslqtkl lvsdsyrpgw mnfrellr
//
LOCUS       XP_061009960             550 aa            linear   MAM 02-DEC-2023
DEFINITION  acyl-coenzyme A synthetase ACSM2B, mitochondrial-like [Dama dama].
ACCESSION   XP_061009960
VERSION     XP_061009960.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153977.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..550
                     /product="acyl-coenzyme A synthetase ACSM2B,
                     mitochondrial-like"
                     /calculated_mol_wt=61381
     Region          40..542
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(218,221..226,228..229)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341228"
     Site            order(221,338..339,360..365,420,432,435,446,531)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341228"
     Site            order(221,262..263,312,314..315,318,338..339,360..365,420,
                     432,435,443..446,512)
                     /site_type="active"
                     /db_xref="CDD:341228"
     Site            order(262,314..315,318,338,443..445,506,512)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:341228"
     CDS             1..550
                     /gene="LOC133064034"
                     /coded_by="XM_061153977.1:1..1653"
                     /db_xref="GeneID:133064034"
ORIGIN      
        1 mhwrrqlqal cilwrsqmsn htirihtrql aslqwghqev pakfnfatdv idhwagmeka
       61 gkrppgpalw wvsgtgdevk wnfsqlsels qrtanvfsgp cglqrgdrvt vvlprvpeww
      121 lvilgcmrag lvfmpgtiqm kakdilyrlq vskaraivag devaeivdtv apecpslktk
      181 llvseksrdg wldfktllwk astthcsvet gsqeaaaiyf tsgtsglpkm aehshsslgi
      241 kakmdagkwi dlqasdiiwp isdtawivni lgsllepwts gactfihllp kfdpviilkv
      301 lssypinymv gapivyrmll lqdfssykfp hlkccfsgge sllpdtlekw kaqtgldile
      361 fygqtetvid ekgnvlppgt egdvgirvkp irpigifsgy vdnlektean irgdfwvlgd
      421 raikdqdgyf qfmgrtddii nssgyrigps evenalmehp avvetavvss pdpirgevvk
      481 afvvlaphfl shdpdeltke lqqhvksvta pykyprkief vldlpktdtg kiqraklrdk
      541 ewkkseqagv
//
LOCUS       XP_061009961             577 aa            linear   MAM 02-DEC-2023
DEFINITION  acyl-coenzyme A synthetase ACSM1, mitochondrial [Dama dama].
ACCESSION   XP_061009961
VERSION     XP_061009961.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153978.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..577
                     /product="acyl-coenzyme A synthetase ACSM1, mitochondrial"
                     /calculated_mol_wt=64807
     Region          46..573
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(223,226..231,233..234)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341228"
     Site            order(226,343..344,365..370,452,464,467,478,563)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341228"
     Site            order(226,267..268,317,319..320,323,343..344,365..370,452,
                     464,467,475..478,544)
                     /site_type="active"
                     /db_xref="CDD:341228"
     Site            order(267,319..320,323,343,475..477,538,544)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:341228"
     CDS             1..577
                     /gene="LOC133064035"
                     /coded_by="XM_061153978.1:1..1734"
                     /db_xref="GeneID:133064035"
ORIGIN      
        1 mqrlmkfrvl wgihmscpgf hhvpqhlrcq slsgagalrl ndydrpeefn fasdvldhwt
       61 qmekegkrsp npalwwvndq gdevkwsfre mtdltcrtan vftqacglqt gdrlalilpr
      121 vpewwlasvg cirtgviymp gttqmkakdi lyrlqvseak aivttdtlap evdsvapecp
      181 slktkllvsd hsregwldfr sliksasadh iciksktldp maifftsgtt gfpkmakhsh
      241 gfalrsyfpa crkllqlkms dvfwclsdtg wilatlgclf epwtsgstvf ahhlpqfdpk
      301 viietlfkyp itqclaapsv yrmilqhnft slrfptlehc ltggeallpe eqeqwnrqtg
      361 vllyqaygqs etgigcgtlr gmkikpgsmg kaippfdiqi iddkgniqpp ntegnigiri
      421 kptrpiglfm yyennpekta evecgdfynt gdkatideeg yfwflgrsdd vinasgyrig
      481 paevenalae hpavaesavv sspdpargev vkafivlkpe fscrdqdeli kelqqhvksv
      541 tapykyprkv efvselpkti tgkikrselr kkefgqk
//
LOCUS       XP_061009962             163 aa            linear   MAM 02-DEC-2023
DEFINITION  transport and Golgi organization protein 1 homolog [Dama dama].
ACCESSION   XP_061009962
VERSION     XP_061009962.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153979.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..163
                     /product="transport and Golgi organization protein 1
                     homolog"
                     /calculated_mol_wt=18183
     CDS             1..163
                     /gene="LOC133064036"
                     /coded_by="XM_061153979.1:683..1174"
                     /db_xref="GeneID:133064036"
ORIGIN      
        1 mqeelqqeef sfrhqislle kkaqdnwikg rileremaeq sreaaylrhk laitekqglq
       61 ekygvpkpvl grpetqrppg rdtgpdmapm rnsnsfatkd vqkgqvsmda rgpfpfplpp
      121 cmpypmgcpl sppkgcgplp pplpwhslgp hpmppylpdg epv
//
LOCUS       XP_061009963             178 aa            linear   MAM 02-DEC-2023
DEFINITION  peptidyl-prolyl cis-trans isomerase H [Dama dama].
ACCESSION   XP_061009963
VERSION     XP_061009963.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153980.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..178
                     /product="peptidyl-prolyl cis-trans isomerase H"
                     /calculated_mol_wt=19134
     Region          8..178
                     /region_name="cyclophilin"
                     /note="cyclophilin-type peptidylprolyl cis- trans
                     isomerases. This family contains eukaryotic, bacterial and
                     archeal proteins which exhibit a peptidylprolyl cis- trans
                     isomerases activity (PPIase, Rotamase) and in addition
                     bind the immunosuppressive drug...; cl00197"
                     /db_xref="CDD:469651"
     Site            order(67..68,73,124,126,134)
                     /site_type="active"
                     /db_xref="CDD:238907"
     CDS             1..178
                     /gene="LOC133064037"
                     /coded_by="XM_061153980.1:35..571"
                     /db_xref="GeneID:133064037"
ORIGIN      
        1 mavansspvn pvvffdvsig ggqevgrmki elfadvvpkt aenfrqfctg efrkdgvpig
       61 ykgstfhrvi kdfmiqggdf vngdgtgvas iyrgpfaden fklrhsapgl lsmansgpst
      121 ngcqffitcs kcdwldgkhv vfgkiidgll vmrkienvpt gpnnkpklpv visqcgem
//
LOCUS       XP_061009964             421 aa            linear   MAM 02-DEC-2023
DEFINITION  putative short-chain dehydrogenase/reductase family 42E member 2
            [Dama dama].
ACCESSION   XP_061009964
VERSION     XP_061009964.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153981.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..421
                     /product="putative short-chain dehydrogenase/reductase
                     family 42E member 2"
                     /calculated_mol_wt=46035
     Region          39..377
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(44,46..47,49,68..70,106..108,148..150,180,184,
                     212..215)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(126,150,180,184)
                     /site_type="active"
                     /db_xref="CDD:187535"
     CDS             1..421
                     /gene="SDR42E2"
                     /coded_by="XM_061153981.1:1..1266"
                     /db_xref="GeneID:133064040"
ORIGIN      
        1 mkpnpagssp eackaagqvp tpgqqqkaqa tpvqasrqki vvtggagylg fnlgsslaks
       61 gtsvilldlr rpqwelcpgt efvqadvrna ealhrtfegv dcvfhvasyg msgaeqlqke
      121 qiesinvggt klvidacvrq rvprlvytst vnvafggkpv eqgdedsvpy fplekhtdhy
      181 srtkaiadql ilmangtplp gggslrtcvl rppgiygpee qrhlprvash ikkrffmfrf
      241 gdrrtrmnwv hvrnlvqahv laaealtaak ghvasgqayy indgdsvnlf ewmaplfekl
      301 gysqpwiqvp tswvylsatv meylhlalrp icslpplltr sevrsvtvth tfqiakaraq
      361 lgyvpdkfsf adaveryvqs tagrtrgsta rtllrlllgl slflgllvla lrflglqpsv
      421 v
//
LOCUS       XP_061009966             905 aa            linear   MAM 02-DEC-2023
DEFINITION  otoancorin [Dama dama].
ACCESSION   XP_061009966
VERSION     XP_061009966.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153983.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..905
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..905
                     /product="otoancorin"
                     /calculated_mol_wt=100079
     Region          328..>731
                     /region_name="Mesothelin"
                     /note="Pre-pro-megakaryocyte potentiating factor precursor
                     (Mesothelin); pfam06060"
                     /db_xref="CDD:368727"
     CDS             1..905
                     /gene="OTOA"
                     /coded_by="XM_061153983.1:202..2919"
                     /db_xref="GeneID:133064041"
ORIGIN      
        1 mtgvlktssn vtddsvswvs aenlwilgry mvhlsfeeim rispieiglf isydnatkql
       61 dtvydvtpel aqafleriss snfdmrntst ihrlgllvcf yddlelldaa vaqvllhqmi
      121 rcshlrgfqa gvqklkaell eiatenqtln etlgslsdav vglthsqles lspeavhgai
      181 stlnqvsgwa rsqiiilsak ylahqkvlsf ynvsqmgvll agvgtqafha mdrrdlmqll
      241 rsatslhvsd lspaqqhgvl skvmeaedta sgiveiqgaf fkevslfdlw resgfnstvl
      301 kekeirrsqa lflfellskt trrpeellsa gqllkgvtcp hidamsadsf lvhfhyfenn
      361 fsllspyqvn clawkywevs rssmplflla alparylasi pdsrcvpfli slgksqldsl
      421 vldshkknsv lkkvqqclsh tiadeyavdi lgnllchlpa avirrglspk awatalrglr
      481 dcldlspqqk aavrlrlleq hglpqnwtae tvkdlgsflv lfsgdelssv atkfpdtlqq
      541 tasemartlp pkeflqavfe svrnsslenp ssdpspgchg ivapsfddiv klaeanacwa
      601 pedllcleed tflrsvellg airsfslaql rklkekavqv wdmpsywrey hivslgrial
      661 alneseleql dlssidtvas lsqqtewtpg qaksilqgfl edsgyrvqdl ksfhlvglga
      721 tlcamnitei slikilefrv vvarigtllc spqvlaefkr kaevvfgept dwprfvlqel
      781 gtiaagltke elrmldkdlm pyfqpsaikc lpdeifkels aeqiaslgpe naaavtpaqr
      841 rqlsmvqlqs lqraldgakt rswldappsa spartpssls ppgawvsrgl glgypllvlm
      901 pkllw
//
LOCUS       XP_061009967              57 aa            linear   MAM 02-DEC-2023
DEFINITION  cytochrome c oxidase assembly protein COX14 [Dama dama].
ACCESSION   XP_061009967
VERSION     XP_061009967.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153984.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..57
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..57
                     /product="cytochrome c oxidase assembly protein COX14"
                     /calculated_mol_wt=6339
     Region          1..52
                     /region_name="COX14"
                     /note="Cytochrome oxidase c assembly; pfam14880"
                     /db_xref="CDD:434280"
     CDS             1..57
                     /gene="LOC133064042"
                     /coded_by="XM_061153984.1:9..182"
                     /db_xref="GeneID:133064042"
ORIGIN      
        1 mptakqladi gyktfstsmm lltvyggylc svrayhyfqr rssrrqaaee qktsgal
//
LOCUS       XP_061009968             652 aa            linear   MAM 02-DEC-2023
DEFINITION  amiloride-sensitive sodium channel subunit gamma [Dama dama].
ACCESSION   XP_061009968
VERSION     XP_061009968.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153985.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..652
                     /product="amiloride-sensitive sodium channel subunit
                     gamma"
                     /calculated_mol_wt=74020
     Region          25..633
                     /region_name="ENaC"
                     /note="sodium channel transporter; TIGR00859"
                     /db_xref="CDD:273304"
     CDS             1..652
                     /gene="SCNN1G"
                     /coded_by="XM_061153985.1:86..2044"
                     /db_xref="GeneID:133064043"
ORIGIN      
        1 mapgekikak ikknlpvtgp qapnikelmq wyclntnthg crrivvsrgr lrrllwilft
       61 ltavalifwq callissfyt vsvsikvhfq kldfpavtic ninpykysav rhlladleqe
      121 traalktlyg fseitsrkrr eaqswssvrk gadpkflnla plmafekgdt gkardfftgr
      181 krrvnariih kasdvmhihn skevvgfqlc sndtsdcavy tfssgvnaiq ewyklhymni
      241 maqvsqekki nmsysadell itcffdgvsc darnftlfhh pmygncytfn nrqnetilst
      301 smggsefglq vilyineeey npflvsstga kvivhrqdey pfvedvgtei etamatsigm
      361 hltesfklsd pysqctedws dvqitniyna tyspqiclhs cfqakmvenc gcaqysqplp
      421 qgadycnyqq hpnwmycyyq lhqafvreel gcqsvckeac sfkewtltts laqwpsevse
      481 kwllsvltwd qsqqikkkln ktdlakllif ykdlnqrsiv enpansieql lsniggqlgl
      541 wmscsvvcvi eiievffids lsiiarqqwh kakgwwarrr apacpeaprt rqgrvnpgld
      601 idddlptfts alslppapga qvpgtpppry ntlrlerafs sqltdtqeaa es
//
LOCUS       XP_061009969             642 aa            linear   MAM 02-DEC-2023
DEFINITION  amiloride-sensitive sodium channel subunit beta [Dama dama].
ACCESSION   XP_061009969
VERSION     XP_061009969.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153986.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..642
                     /product="amiloride-sensitive sodium channel subunit beta"
                     /calculated_mol_wt=72439
     Region          22..625
                     /region_name="ENaC"
                     /note="sodium channel transporter; TIGR00859"
                     /db_xref="CDD:273304"
     CDS             1..642
                     /gene="SCNN1B"
                     /coded_by="XM_061153986.1:59..1987"
                     /db_xref="GeneID:133064044"
ORIGIN      
        1 mmhvkkyllk glhrlqkgpg ytykellvwy cdntnthgpk riicegpkkk amwfvltllf
       61 tslvcwqwgl fiktylnwev svslsigfkt mdfpavticn aspfqyskvq hllkdldelm
      121 eavlgrilgp elsqvnatrt lnlsiwhhtp lvfineqnph hpvvldlfed nfngsasssp
      181 apgrpcsahr ckvamrlcsh ngttctfrnf ssatqavtew ytlqatnifa qvpnqelvam
      241 gypaerlila clfgaepcny rnftpifhpd ygncyifnwg mtekalpsan pgtefglkli
      301 ldmgqedyvp fltstagarl mlheqrsypf ikeegiyama gmetsigvlv dklqrkgkpy
      361 sqctkngsdv pipnlyssyn ttysiqacir scfqehmire cgcghylypl phkrkycnnq
      421 efpdwahcys alrismaqre aciyackesc ndtqykmtis mavwpsease dwifhvlsqe
      481 rdqssnitls rkgivklniy fqefnyrtie esaannivwl lsnlggqfgf wmggsvlcli
      541 efgeiiidfv witiiklval aksvrqkraq aryegppptv aelveahtnf gfqpdsatpg
      601 pdagaypheq nppipgtppp nydslrlqpl dviesdsegd ai
//
LOCUS       XP_061009970             264 aa            linear   MAM 02-DEC-2023
DEFINITION  BRCA2 and CDKN1A-interacting protein-like [Dama dama].
ACCESSION   XP_061009970
VERSION     XP_061009970.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153987.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..264
                     /product="BRCA2 and CDKN1A-interacting protein-like"
                     /calculated_mol_wt=30019
     Region          50..241
                     /region_name="BCCIP"
                     /note="pfam13862"
                     /db_xref="CDD:464002"
     CDS             1..264
                     /gene="LOC133064045"
                     /coded_by="XM_061153987.1:4..798"
                     /db_xref="GeneID:133064045"
ORIGIN      
        1 macrpkrral spvspalgde ekedeveevd eddsdeeede edevineevn iefeaysisd
       61 ndydgikkll qqlflkapvn taeltdlliq qnhigsvikq tdasedsddd vdedeifgfi
      121 sllnlserkg tpcteqikel ilrlceknce ksaveqldrp vgfllserfi nvppqialpm
      181 hqqlqkelae ahktnkpcgk yhfylliskt fveagksgsk krrssqnkee lmfanveeef
      241 fyekailkfn ysvqeesdtc lggr
//
LOCUS       XP_061009971             258 aa            linear   MAM 02-DEC-2023
DEFINITION  UBX domain-containing protein 2A [Dama dama].
ACCESSION   XP_061009971
VERSION     XP_061009971.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153988.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..258
                     /product="UBX domain-containing protein 2A"
                     /calculated_mol_wt=29113
     Region          65..138
                     /region_name="SEP"
                     /note="SEP domain; pfam08059"
                     /db_xref="CDD:462348"
     Region          167..250
                     /region_name="UBX_UBXN2A"
                     /note="Ubiquitin regulatory domain X (UBX) found in UBX
                     domain protein 2A (UBXN2A) and similar proteins; cd17160"
                     /db_xref="CDD:340680"
     Site            order(175,177,179..180,183..184,186,220..221,223,239..242,
                     244,246)
                     /site_type="other"
                     /note="putative UBX-p97 interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:340680"
     CDS             1..258
                     /gene="LOC133064047"
                     /coded_by="XM_061153988.1:40..816"
                     /db_xref="GeneID:133064047"
ORIGIN      
        1 mkevdnlesi keewvcetgs dhqplsdsqq tnceyfvdsl feeaqkvgak clspteqkkq
       61 vdvsiklwkn gftvnddfrs ysdgasqqfl nsikkgelpl elqgvfdkee vdvkvedkkn
      121 eicmstkpvf qpfsgqghrl gsatpkivsk aknievenkn klstvplnnl epitniqiwl
      181 angkrivqkf nishrishik dfiekyqgsq rsppfslata lpflklldet ltleeadlqn
      241 aviiqrlkkt aepfkels
//
LOCUS       XP_061009972             315 aa            linear   MAM 02-DEC-2023
DEFINITION  voltage-dependent calcium channel gamma-3 subunit [Dama dama].
ACCESSION   XP_061009972
VERSION     XP_061009972.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153989.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..315
                     /product="voltage-dependent calcium channel gamma-3
                     subunit"
                     /calculated_mol_wt=35400
     Region          6..196
                     /region_name="PMP22_Claudin"
                     /note="PMP-22/EMP/MP20/Claudin family; cl21598"
                     /db_xref="CDD:473919"
     CDS             1..315
                     /gene="CACNG3"
                     /coded_by="XM_061153989.1:1..948"
                     /db_xref="GeneID:133064049"
ORIGIN      
        1 mrmcdrgvqm littvgafaa fslmtiavgt dywlysrgvc rtkstsdnet srkneevmth
       61 sglwrtccle gtfrgvckki dhfpedadye qdtaeyllra vrassvfpil svtllffggl
      121 cvaasefhrs rhnvilsagi ffvsaglsni igiivyisan agdpgqrdsk ksysygwsfy
      181 fgafsfiiae ivgvvavhiy iekhqqlrak shsellkkst farlppyryr frrrsssrst
      241 eprsrdlspi skgfhtipst dismftlsrd pskitmgtll nsdrdhaflq fhnstpkefk
      301 eslhnnpanr rttpv
//
LOCUS       XP_061009973             263 aa            linear   MAM 02-DEC-2023
DEFINITION  aquaporin-8 isoform X1 [Dama dama].
ACCESSION   XP_061009973
VERSION     XP_061009973.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153990.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..263
                     /product="aquaporin-8 isoform X1"
                     /calculated_mol_wt=27487
     Region          40..250
                     /region_name="MIP"
                     /note="Major intrinsic protein (MIP) superfamily. Members
                     of the MIP superfamily function as membrane channels that
                     selectively transport water, small neutral molecules, and
                     ions out of and between cells. The channel proteins share
                     a common fold: the N-terminal...; cl00200"
                     /db_xref="CDD:444743"
     Site            order(74,92..94,208..209,212,215)
                     /site_type="active"
                     /note="amphipathic channel [active]"
                     /db_xref="CDD:238204"
     Site            order(94..96,212..214)
                     /site_type="other"
                     /note="Asn-Pro-Ala signature motifs"
                     /db_xref="CDD:238204"
     CDS             1..263
                     /gene="AQP8"
                     /coded_by="XM_061153990.1:120..911"
                     /db_xref="GeneID:133064050"
ORIGIN      
        1 mfteaaasmc dlesgsvkvk eprgrgrgqg gwyerlvqpc lvellgsalf ifigclsvie
       61 ngpdtgrlqp alahglalgl viatlgnisg ghfnpavsla amlvgglrlt mlfpywisql
      121 cggligaala kvvspeerfw natgaafvtv qeseqvagav vaeiilttll altvcmgain
      181 ektlgplapf cigfsvtvdi laggavsgac mnparafgpa mvanhwdfhw iywlgpllas
      241 llvgvlirlf igdakirlil kgr
//
LOCUS       XP_061009974             228 aa            linear   MAM 02-DEC-2023
DEFINITION  aquaporin-8 isoform X2 [Dama dama].
ACCESSION   XP_061009974
VERSION     XP_061009974.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153991.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..228
                     /product="aquaporin-8 isoform X2"
                     /calculated_mol_wt=24218
     Region          40..>133
                     /region_name="MIP"
                     /note="Major intrinsic protein (MIP) superfamily. Members
                     of the MIP superfamily function as membrane channels that
                     selectively transport water, small neutral molecules, and
                     ions out of and between cells. The channel proteins share
                     a common fold: the N-terminal...; cl00200"
                     /db_xref="CDD:444743"
     CDS             1..228
                     /gene="AQP8"
                     /coded_by="XM_061153991.1:120..806"
                     /db_xref="GeneID:133064050"
ORIGIN      
        1 mfteaaasmc dlesgsvkvk eprgrgrgqg gwyerlvqpc lvellgsalf ifigclsvie
       61 ngpdtgrlqp alahglalgl viatlgnisg ghfnpavsla amlvgglrlt mlfpywisql
      121 cggligaala kgccvwsmhe scpglrtchg gqplglpldl lagpppgqpa crsahqalhw
      181 rcenssnpkg tvrlrwwnsc cprdpqwthp gpqmrqlcis crgraske
//
LOCUS       XP_061009976             163 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor BTF3-like [Dama dama].
ACCESSION   XP_061009976
VERSION     XP_061009976.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153993.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..163
                     /product="transcription factor BTF3-like"
                     /calculated_mol_wt=17697
     Region          9..125
                     /region_name="NAC_BTF3"
                     /note="basal transcription factor BTF3; cd22055"
                     /db_xref="CDD:409234"
     Site            27..31
                     /site_type="other"
                     /note="ribosome binding motif"
                     /db_xref="CDD:409234"
     Site            order(57..67,72,74,86..92,94,108..110)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:409234"
     CDS             1..163
                     /gene="LOC133064051"
                     /coded_by="XM_061153993.1:111..602"
                     /db_xref="GeneID:133064051"
ORIGIN      
        1 mketimnqek laklqaqvri ggkgtarrkk kvvhrtatad dkklqfslkk lgvnnisgie
       61 evnmftnqgt vihfnnpkvq aslaantfti tghaetkqlt emlpsilnql gadsltslrr
      121 laealpkqsv dgkaplatge eddddevpdl venfdeaskn ean
//
LOCUS       XP_061009977             449 aa            linear   MAM 02-DEC-2023
DEFINITION  heparan sulfate glucosamine 3-O-sulfotransferase 4 [Dama dama].
ACCESSION   XP_061009977
VERSION     XP_061009977.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153994.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..449
                     /product="heparan sulfate glucosamine 3-O-sulfotransferase
                     4"
                     /calculated_mol_wt=48977
     Region          190..427
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; pfam00685"
                     /db_xref="CDD:425820"
     CDS             1..449
                     /gene="HS3ST4"
                     /coded_by="XM_061153994.1:1..1350"
                     /db_xref="GeneID:133064052"
ORIGIN      
        1 mapwpapppp pppppslaap pppgvsakgp parkllfmct lslsvtylcy sllggsgslq
       61 fplalqeppg aaeppppslp pppvrlgaps qppapppppd nasrgeppet pkqpaapgad
      121 gwglasgsgg ardawlrtpl tpgemgtaqs allereapes sttdeelagr raangssnav
      181 stpdygekkl pqaliigvkk ggtralleai rvhpdvravg vephffdrny ekglewyrnv
      241 mpktldgqlt mektpsyfvt neapkrihsm akdiklivvv rnpvtraisd ytqtlskkpe
      301 iptfevlafk nrtlglidas wsairigiya lhlenwlqyf plsqilfvsg erlivdpage
      361 makvqdflgl krvvtekhfy fnktkgfpcl kkpedssapr clgkskgrth pridpdvihr
      421 lrkfykpfnm mfyqmtgqdf rweqeegdk
//
LOCUS       XP_061009978             330 aa            linear   MAM 02-DEC-2023
DEFINITION  germ cell-specific gene 1-like protein isoform X1 [Dama dama].
ACCESSION   XP_061009978
VERSION     XP_061009978.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153995.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..330
                     /product="germ cell-specific gene 1-like protein isoform
                     X1"
                     /calculated_mol_wt=36485
     Region          24..130
                     /region_name="GSG-1"
                     /note="GSG1-like protein; pfam07803"
                     /db_xref="CDD:462270"
     Region          <100..233
                     /region_name="PMP22_Claudin"
                     /note="PMP-22/EMP/MP20/Claudin family; cl21598"
                     /db_xref="CDD:473919"
     CDS             1..330
                     /gene="GSG1L"
                     /coded_by="XM_061153995.1:1..993"
                     /db_xref="GeneID:133064054"
ORIGIN      
        1 mktsrrgral lavalnllal lfattafltt hwcqgtqrvp kpgcgqggsa ncpnsganat
       61 angtaapavp aapaagngpp ggalyswetg ddrflfrnfh tgiwysceee lgglgekcrs
      121 fidlapasek gvlwlsvvse vlyilllvvg fslmclelfh ssnvidglkl nafaavftvl
      181 sgllgmvahm mytqvfqvtv slgpedwrph swdygwsfcl awgsftccma asvttlnsyt
      241 ktviefrhkr kvfeqgyree ptfidpeaik yfrermekgd gheeedfrld crheryparh
      301 qphvgdswpr tsaheapels rqcwvlghwv
//
LOCUS       XP_061009979             279 aa            linear   MAM 02-DEC-2023
DEFINITION  germ cell-specific gene 1-like protein isoform X2 [Dama dama].
ACCESSION   XP_061009979
VERSION     XP_061009979.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153996.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..279
                     /product="germ cell-specific gene 1-like protein isoform
                     X2"
                     /calculated_mol_wt=30961
     Region          24..130
                     /region_name="GSG-1"
                     /note="GSG1-like protein; pfam07803"
                     /db_xref="CDD:462270"
     CDS             1..279
                     /gene="GSG1L"
                     /coded_by="XM_061153996.1:1..840"
                     /db_xref="GeneID:133064054"
ORIGIN      
        1 mktsrrgral lavalnllal lfattafltt hwcqgtqrvp kpgcgqggsa ncpnsganat
       61 angtaapavp aapaagngpp ggalyswetg ddrflfrnfh tgiwysceee lgglgekcrs
      121 fidlapasek gllgmvahmm ytqvfqvtvs lgpedwrphs wdygwsfcla wgsftccmaa
      181 svttlnsytk tviefrhkrk vfeqgyreep tfidpeaiky frermekgdg heeedfrldc
      241 rheryparhq phvgdswprt saheapelsr qcwvlghwv
//
LOCUS       XP_061009980             422 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase SBK1 [Dama dama].
ACCESSION   XP_061009980
VERSION     XP_061009980.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153997.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..422
                     /product="serine/threonine-protein kinase SBK1"
                     /calculated_mol_wt=45832
     Region          59..317
                     /region_name="STKc_SBK1"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     SH3 Binding Kinase 1; cd13987"
                     /db_xref="CDD:270889"
     Site            order(59..63,67,80,82,111,128..131,135,137,174,176,
                     178..179,181,194,197,210..213)
                     /site_type="active"
                     /db_xref="CDD:270889"
     Site            order(59..63,67,80,82,111,128..131,135,174,176,178..179,
                     181,194)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270889"
     Site            order(63,135,137,174,176,178,197,210..213)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270889"
     Site            193..213
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270889"
     CDS             1..422
                     /gene="SBK1"
                     /coded_by="XM_061153997.1:688..1956"
                     /db_xref="GeneID:133064055"
ORIGIN      
        1 msvgcpepep phslpccgpg tapglgagvp lltedmqalt lrtvaasdvt khyelvrelg
       61 kgtygkvdlv aykgtgtkma lkfvnksktk lknflrevsi tnslssspfi ikvfdvvfet
      121 edcyvfaqey apagdlfdii ppqvglpedt vkrcvqqlgl aldfmhgrql vhrdikpenv
      181 llfdrecrrv kladfgmtrr vgcrvkrvsg tipytapevc qagradgfav dtgvdvwafg
      241 vlifcvltgn fpweaasgad affeefvrwq rgrlpglpsq wrrftepalr mfqrllalep
      301 errgpakevf rflkheltse lrrrpshrar kpagdrppaa gplrleapgp lkrtvltesg
      361 sgsrpappav gpgpvpvpvp vpvpvpvpep glappgppgr tdgrpdkskg qvvlataiei
      421 cv
//
LOCUS       XP_061009981              82 aa            linear   MAM 02-DEC-2023
DEFINITION  nuclear protein 1 [Dama dama].
ACCESSION   XP_061009981
VERSION     XP_061009981.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061153998.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..82
                     /product="nuclear protein 1"
                     /calculated_mol_wt=8982
     Region          24..77
                     /region_name="Phospho_p8"
                     /note="DNA-binding nuclear phosphoprotein p8; pfam10195"
                     /db_xref="CDD:462991"
     CDS             1..82
                     /gene="NUPR1"
                     /coded_by="XM_061153998.1:171..419"
                     /db_xref="GeneID:133064056"
ORIGIN      
        1 matfpraasp srqppgpede daildeydly slahsypgmg grkgrskrea aintnrhspg
       61 gherklvtkl qnterkkrga rp
//
LOCUS       XP_061009983             437 aa            linear   MAM 02-DEC-2023
DEFINITION  T-box transcription factor TBX6 isoform X1 [Dama dama].
ACCESSION   XP_061009983
VERSION     XP_061009983.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154000.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..437
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..437
                     /product="T-box transcription factor TBX6 isoform X1"
                     /calculated_mol_wt=47090
     Region          92..274
                     /region_name="T-box"
                     /note="DNA-binding domain of the T-box transcription
                     factor family; cl00145"
                     /db_xref="CDD:469628"
     Site            order(119..120,153,197,200,213..214,251..254,259,262..263,
                     266)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410312"
     CDS             1..437
                     /gene="TBX6"
                     /coded_by="XM_061154000.1:331..1644"
                     /db_xref="GeneID:133064058"
ORIGIN      
        1 myhprelyps lgtgyrlgpp qpgadssfpp alaegyrypd ldtpkldcfl sgieaaprtl
       61 aappplpplp palgtepppp sapeglhslp gvslslenre lwkefnsvgt emiitkagrr
      121 mfpacrvsvt gldpearylf lldvvpvdga ryrwqgrrwe psgkaeprlp drvyihpdsp
      181 atgahwmrqp vsfhrvkltn stldphghli lhsmhkyqpr ihlvraaqlc sqhwggvasf
      241 rfpettfisv tayqnpritq lkiaanpfak gfrengrnck rerdarvkrk lrgpepaaia
      301 aygsgdapgg pcdstlggdv resdpeqapv peeavrapap pcsgpsaeay llhpaafhga
      361 pshlptrnps fpeapdsgrp apysaaflel qpgpagsgyp aaappasfas hflqggpfpl
      421 pypgpgayld vgskpmy
//
LOCUS       XP_061009984             423 aa            linear   MAM 02-DEC-2023
DEFINITION  T-box transcription factor TBX6 isoform X2 [Dama dama].
ACCESSION   XP_061009984
VERSION     XP_061009984.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154001.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..423
                     /product="T-box transcription factor TBX6 isoform X2"
                     /calculated_mol_wt=45482
     Region          78..260
                     /region_name="T-box"
                     /note="DNA-binding domain of the T-box transcription
                     factor family; cl00145"
                     /db_xref="CDD:469628"
     Site            order(105..106,139,183,186,199..200,237..240,245,248..249,
                     252)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410312"
     CDS             1..423
                     /gene="TBX6"
                     /coded_by="XM_061154001.1:206..1477"
                     /db_xref="GeneID:133064058"
ORIGIN      
        1 mlspsksrpp segagvtcqr slerqdldtp kldcflsgie aaprtlaapp plpplppalg
       61 teppppsape glhslpgvsl slenrelwke fnsvgtemii tkagrrmfpa crvsvtgldp
      121 earylflldv vpvdgaryrw qgrrwepsgk aeprlpdrvy ihpdspatga hwmrqpvsfh
      181 rvkltnstld phghlilhsm hkyqprihlv raaqlcsqhw ggvasfrfpe ttfisvtayq
      241 npritqlkia anpfakgfre ngrnckrerd arvkrklrgp epaaiaaygs gdapggpcds
      301 tlggdvresd peqapvpeea vrapappcsg psaeayllhp aafhgapshl ptrnpsfpea
      361 pdsgrpapys aaflelqpgp agsgypaaap pasfashflq ggpfplpypg pgayldvgsk
      421 pmy
//
LOCUS       XP_061009985             275 aa            linear   MAM 02-DEC-2023
DEFINITION  ceramide synthase [Dama dama].
ACCESSION   XP_061009985
VERSION     XP_061009985.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154002.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..275
                     /product="ceramide synthase"
                     /calculated_mol_wt=30611
     Region          40..261
                     /region_name="TLC"
                     /note="TRAM, LAG1 and CLN8 homology domains; smart00724"
                     /db_xref="CDD:214789"
     CDS             1..275
                     /gene="TLCD3B"
                     /coded_by="XM_061154002.1:1..828"
                     /db_xref="GeneID:133064059"
ORIGIN      
        1 mltpmvaggv vfpglfllsk ntlqrlpqlr weeadavivs arlvssvqav mastagyivs
       61 tsckhiiddq hwlssaytqf avpyfiydiy amflchwhkh qvkghggdeg gtrapgstwa
      121 vargylhkef lmvlhhavmv lvcfplsvvw rqgkgdfflg cllmaevstp fvclgkiliq
      181 ykqqhtllhk vngalmllsf lccrvllfpy lywaygrhag lpllavplal pvhvnlgaal
      241 llapqlywff licrgacrlf rprgsrppsp cqtqd
//
LOCUS       XP_061009986             367 aa            linear   MAM 02-DEC-2023
DEFINITION  aspartate beta-hydroxylase domain-containing protein 1 [Dama dama].
ACCESSION   XP_061009986
VERSION     XP_061009986.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154003.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..367
                     /product="aspartate beta-hydroxylase domain-containing
                     protein 1"
                     /calculated_mol_wt=38555
     Region          191..349
                     /region_name="Asp_Arg_Hydrox"
                     /note="Aspartyl/Asparaginyl beta-hydroxylase; pfam05118"
                     /db_xref="CDD:461552"
     CDS             1..367
                     /gene="ASPHD1"
                     /coded_by="XM_061154003.1:427..1530"
                     /db_xref="GeneID:133064060"
ORIGIN      
        1 mwrgnsaggn qgaamegtgg elgeqgnwgl edapgllara slpimpawpl plassaltll
       61 lgaltslflw ycyrlgsqdm qalgagsrag avggrpggcs eagrpspgcs gepgegprte
      121 glvsrrlray arryswagmg rvrraaqggp spgggpgvlg iqrpgllflp dlpsapfvpr
      181 eaqrhdvell essfpailrd fgavswdfsg mtppprgwsp plapgcyqll lyqagrcqps
      241 ncrrcpgayr alrglrsfms antfgnagfs vllpgarleg rcgptnarvr chlglkippg
      301 celvvggepq cwaeghcllv ddsflhtvah ngspedgprv vfivdlwhpn vagaerqald
      361 fvfapdp
//
LOCUS       XP_061009987             924 aa            linear   MAM 02-DEC-2023
DEFINITION  seizure 6-like protein 2 isoform X1 [Dama dama].
ACCESSION   XP_061009987
VERSION     XP_061009987.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154004.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..924
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..924
                     /product="seizure 6-like protein 2 isoform X1"
                     /calculated_mol_wt=98970
     Region          173..285
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(181,183,185,215,220,256,280,282,284..285)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          290..346
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(300,317)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          349..>417
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Region          464..523
                     /region_name="Sushi"
                     /note="Sushi repeat (SCR repeat); pfam00084"
                     /db_xref="CDD:459664"
     Region          527..617
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Region          <665..829
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     CDS             1..924
                     /gene="SEZ6L2"
                     /coded_by="XM_061154004.1:474..3248"
                     /db_xref="GeneID:133064061"
ORIGIN      
        1 mgtpraqhpp ppqllflfll scpwiqglpl keeealpepg setptvasea laellhgall
       61 rkgpemgylp gsdpdptlat ppvgqtlaap flpratepgt gplttavtpk ggrgagptap
      121 elltpppgtt applpgpasp gpplgpegge eettttiitt ttvtttvtsp vlcnnniseg
      181 eghvespdlg saasrtlgll dctysihvyp gygieiqvqm lnlsreeell vlagggspgl
      241 aprllanssm lgegqvlrsp tnrlllhfqs prvprgagfr ihyqayllsc gfpprpahgd
      301 vsvtdlhpgg tatfhcdsgy qlqgeetlic lngtrpawss eppscvascg gtihnatlgr
      361 ivspepggaa gpnltcrwvi eaaegrrlhl hfervslded ndrlmvrsgg splspviyds
      421 dmddvpergl isdaqslyve llsetpanpl llslrfeafe edrcfapfla hgnvtttdpe
      481 yrpgalatfs clpgyalepp gppnviecvd ptephwndte packamcgge lsepagvvls
      541 pdwpqsyspg qdcvwglhvq eekrillqve ilnvregdml tlfdgdgpsa rvlaqlrgpq
      601 prrrllssgs dltlqfqapp gppnpglgqg fvlhfkevpr ndtcpelppp ewgwrtashg
      661 dlirgtvlty qcepgyellg sdiltcqwdl swsaappacq ktvmtcadpg eitnghrtts
      721 dagfpvgshv qfrclpgysl egaavltcys rdtgtpkwsd rvpkcalkye pclnpgvpen
      781 gyqtlykhhy qageslrffc yegfeligev titcvpghps qwtsqpplck vafeelldnr
      841 klevtqttdp srqleggnla laillplglv iilgsgvyiy ytklqgkslf gfsgshsysp
      901 itvesdfsnp lyeagdtrey evsi
//
LOCUS       XP_061009988             923 aa            linear   MAM 02-DEC-2023
DEFINITION  seizure 6-like protein 2 isoform X2 [Dama dama].
ACCESSION   XP_061009988
VERSION     XP_061009988.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154005.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..923
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..923
                     /product="seizure 6-like protein 2 isoform X2"
                     /calculated_mol_wt=98883
     Region          173..285
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(181,183,185,215,220,256,280,282,284..285)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          290..346
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(300,317)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          349..>417
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Region          464..523
                     /region_name="Sushi"
                     /note="Sushi repeat (SCR repeat); pfam00084"
                     /db_xref="CDD:459664"
     Region          527..617
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Region          <665..828
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     CDS             1..923
                     /gene="SEZ6L2"
                     /coded_by="XM_061154005.1:473..3244"
                     /db_xref="GeneID:133064061"
ORIGIN      
        1 mgtpraqhpp ppqllflfll scpwiqglpl keeealpepg setptvasea laellhgall
       61 rkgpemgylp gsdpdptlat ppvgqtlaap flpratepgt gplttavtpk ggrgagptap
      121 elltpppgtt applpgpasp gpplgpegge eettttiitt ttvtttvtsp vlcnnniseg
      181 eghvespdlg saasrtlgll dctysihvyp gygieiqvqm lnlsreeell vlagggspgl
      241 aprllanssm lgegqvlrsp tnrlllhfqs prvprgagfr ihyqayllsc gfpprpahgd
      301 vsvtdlhpgg tatfhcdsgy qlqgeetlic lngtrpawss eppscvascg gtihnatlgr
      361 ivspepggaa gpnltcrwvi eaaegrrlhl hfervslded ndrlmvrsgg splspviyds
      421 dmddvpergl isdaqslyve llsetpanpl llslrfeafe edrcfapfla hgnvtttdpe
      481 yrpgalatfs clpgyalepp gppnviecvd ptephwndte packamcgge lsepagvvls
      541 pdwpqsyspg qdcvwglhvq eekrillqve ilnvregdml tlfdgdgpsa rvlaqlrgpq
      601 prrrllssgs dltlqfqapp gppnpglgqg fvlhfkevpr ndtcpelppp ewgwrtashg
      661 dlirgtvlty qcepgyellg sdiltcqwdl swsaappacq kimtcadpge itnghrttsd
      721 agfpvgshvq frclpgysle gaavltcysr dtgtpkwsdr vpkcalkyep clnpgvpeng
      781 yqtlykhhyq ageslrffcy egfeligevt itcvpghpsq wtsqpplckv afeelldnrk
      841 levtqttdps rqleggnlal aillplglvi ilgsgvyiyy tklqgkslfg fsgshsyspi
      901 tvesdfsnpl yeagdtreye vsi
//
LOCUS       XP_061009989             910 aa            linear   MAM 02-DEC-2023
DEFINITION  seizure 6-like protein 2 isoform X3 [Dama dama].
ACCESSION   XP_061009989
VERSION     XP_061009989.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154006.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..910
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..910
                     /product="seizure 6-like protein 2 isoform X3"
                     /calculated_mol_wt=97325
     Region          173..285
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(181,183,185,215,220,256,280,282,284..285)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          290..346
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(300,317)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          349..>417
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Region          464..523
                     /region_name="Sushi"
                     /note="Sushi repeat (SCR repeat); pfam00084"
                     /db_xref="CDD:459664"
     Region          527..617
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Region          <665..828
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     CDS             1..910
                     /gene="SEZ6L2"
                     /coded_by="XM_061154006.1:473..3205"
                     /db_xref="GeneID:133064061"
ORIGIN      
        1 mgtpraqhpp ppqllflfll scpwiqglpl keeealpepg setptvasea laellhgall
       61 rkgpemgylp gsdpdptlat ppvgqtlaap flpratepgt gplttavtpk ggrgagptap
      121 elltpppgtt applpgpasp gpplgpegge eettttiitt ttvtttvtsp vlcnnniseg
      181 eghvespdlg saasrtlgll dctysihvyp gygieiqvqm lnlsreeell vlagggspgl
      241 aprllanssm lgegqvlrsp tnrlllhfqs prvprgagfr ihyqayllsc gfpprpahgd
      301 vsvtdlhpgg tatfhcdsgy qlqgeetlic lngtrpawss eppscvascg gtihnatlgr
      361 ivspepggaa gpnltcrwvi eaaegrrlhl hfervslded ndrlmvrsgg splspviyds
      421 dmddvpergl isdaqslyve llsetpanpl llslrfeafe edrcfapfla hgnvtttdpe
      481 yrpgalatfs clpgyalepp gppnviecvd ptephwndte packamcgge lsepagvvls
      541 pdwpqsyspg qdcvwglhvq eekrillqve ilnvregdml tlfdgdgpsa rvlaqlrgpq
      601 prrrllssgs dltlqfqapp gppnpglgqg fvlhfkevpr ndtcpelppp ewgwrtashg
      661 dlirgtvlty qcepgyellg sdiltcqwdl swsaappacq kimtcadpge itnghrttsd
      721 agfpvgshvq frclpgysle gaavltcysr dtgtpkwsdr vpkcalkyep clnpgvpeng
      781 yqtlykhhyq ageslrffcy egfeligevt itcvpghpsq wtsqpplckv tqttdpsrql
      841 eggnlalail lplglviilg sgvyiyytkl qgkslfgfsg shsyspitve sdfsnplyea
      901 gdtreyevsi
//
LOCUS       XP_061009991             167 aa            linear   MAM 02-DEC-2023
DEFINITION  zymogen granule membrane protein 16 [Dama dama].
ACCESSION   XP_061009991
VERSION     XP_061009991.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154008.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..167
                     /product="zymogen granule membrane protein 16"
                     /calculated_mol_wt=18264
     Region          37..158
                     /region_name="Jacalin_ZG16_like"
                     /note="Jacalin-like lectin domain of the zymogen granule
                     protein 16 and related proteins; cd09611"
                     /db_xref="CDD:187707"
     Site            order(57..58,60,62,80..81,102..104,106,124,146,149,151)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:187707"
     CDS             1..167
                     /gene="ZG16"
                     /coded_by="XM_061154008.1:1..504"
                     /db_xref="GeneID:133064062"
ORIGIN      
        1 mltiaflall casasateiq prdssysgey gggggerfsq sgnqldgpit airlrvssyy
       61 ivglqvrygt vwsdyvggts gdldeiflyp gesivqvsgk yktylrklvf vtdkyrflsf
      121 gkdkgtsfna aplypntvlr ffsgragsli daigfhwdfy psdyesc
//
LOCUS       XP_061009992             299 aa            linear   MAM 02-DEC-2023
DEFINITION  nicotinate-nucleotide pyrophosphorylase [carboxylating] [Dama
            dama].
ACCESSION   XP_061009992
VERSION     XP_061009992.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154009.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..299
                     /product="nicotinate-nucleotide pyrophosphorylase
                     [carboxylating]"
                     /calculated_mol_wt=30920
     Region          20..285
                     /region_name="nadC"
                     /note="nicotinate-nucleotide pyrophosphorylase; TIGR00078"
                     /db_xref="CDD:272894"
     CDS             1..299
                     /gene="QPRT"
                     /coded_by="XM_061154009.1:28..927"
                     /db_xref="GeneID:133064063"
ORIGIN      
        1 mdpeglahll ppttlaalad swlredcpgl nyvalvsgta psqavlwaks pgvlagrpff
       61 daifaqvncq vswllpegsk lvpvakvaev rgpahclllg ervalntlar csgvasmaaa
      121 avetargtgw aghvagtrkt tpgfrlveky gllvggaaah rydlgglvmv kdnhvmaagg
      181 vkkavraarq aadfalkvev ecsslqeave aaeagadlvl ldnfrpeelh ptaaalkaqf
      241 psvsveasgg vtldnlpqfc gphidvislg mltqaapald fslklfaega tpvphthqs
//
LOCUS       XP_061009993             170 aa            linear   MAM 02-DEC-2023
DEFINITION  myosin regulatory light chain 11 [Dama dama].
ACCESSION   XP_061009993
VERSION     XP_061009993.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154010.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..170
                     /product="myosin regulatory light chain 11"
                     /calculated_mol_wt=18927
     Region          22..158
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..170
                     /gene="MYL11"
                     /coded_by="XM_061154010.1:61..573"
                     /db_xref="GeneID:133064064"
ORIGIN      
        1 mapkkakrra aaeggsssvf smfdqtqiqe fkeaftvidq nrdgiidked lrdtfaamgr
       61 lnvkneelda mmkeasgpin ftvflnmfge klkgadpedv itgafkvldp egkgtikkqf
      121 leellttqcd rfsqeemrnm waafppdvgg nvdyknicyv ithgdakdqe
//
LOCUS       XP_061009994             275 aa            linear   MAM 02-DEC-2023
DEFINITION  cardiotrophin-1 isoform X1 [Dama dama].
ACCESSION   XP_061009994
VERSION     XP_061009994.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154011.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..275
                     /product="cardiotrophin-1 isoform X1"
                     /calculated_mol_wt=29386
     CDS             1..275
                     /gene="CTF1"
                     /coded_by="XM_061154011.1:7..834"
                     /db_xref="GeneID:133064065"
ORIGIN      
        1 msrregslgf qhwygdreci sggstiwqms galfslswng tepawlknwr iqsgasgfrk
       61 sepgrsgqea rgwgalippl lfppedpqad ssasplthle akiqqthsla rlltkyaeql
      121 lqeyvqhqgd pfglpgfspp rlpvadlsdp apghadlpvh erlrldaaal aalpplldav
      181 rrlqaelnpr alrllrrled aarqvralga aveallgalg aesrgpgpeh aaaaatdsag
      241 vfpakvlgfr vcglylewvs rtevdlgqla pggpa
//
LOCUS       XP_061009995             247 aa            linear   MAM 02-DEC-2023
DEFINITION  cardiotrophin-1 isoform X2 [Dama dama].
ACCESSION   XP_061009995
VERSION     XP_061009995.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154012.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..247
                     /product="cardiotrophin-1 isoform X2"
                     /calculated_mol_wt=26160
     CDS             1..247
                     /gene="CTF1"
                     /coded_by="XM_061154012.1:195..938"
                     /db_xref="GeneID:133064065"
ORIGIN      
        1 msgalfslsw ngtepawlkn wriqsgasgf rksepgrsgq eargwgalip pllfppedpq
       61 adssasplth leakiqqths larlltkyae qllqeyvqhq gdpfglpgfs pprlpvadls
      121 dpapghadlp vherlrldaa alaalpplld avrrlqaeln pralrllrrl edaarqvral
      181 gaaveallga lgaesrgpgp ehaaaaatds agvfpakvlg frvcglylew vsrtevdlgq
      241 lapggpa
//
LOCUS       XP_061009996             199 aa            linear   MAM 02-DEC-2023
DEFINITION  cardiotrophin-1 isoform X3 [Dama dama].
ACCESSION   XP_061009996
VERSION     XP_061009996.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154013.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..199
                     /product="cardiotrophin-1 isoform X3"
                     /calculated_mol_wt=20996
     CDS             1..199
                     /gene="CTF1"
                     /coded_by="XM_061154013.1:27..626"
                     /db_xref="GeneID:133064065"
ORIGIN      
        1 msrregsled pqadssaspl thleakiqqt hslarlltky aeqllqeyvq hqgdpfglpg
       61 fspprlpvad lsdpapghad lpvherlrld aaalaalppl ldavrrlqae lnpralrllr
      121 rledaarqvr algaaveall galgaesrgp gpehaaaaat dsagvfpakv lgfrvcglyl
      181 ewvsrtevdl gqlapggpa
//
LOCUS       XP_061009997             284 aa            linear   MAM 02-DEC-2023
DEFINITION  ATP synthase F(0) complex subunit B1, mitochondrial-like [Dama
            dama].
ACCESSION   XP_061009997
VERSION     XP_061009997.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154014.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..284
                     /product="ATP synthase F(0) complex subunit B1,
                     mitochondrial-like"
                     /calculated_mol_wt=31722
     Region          112..272
                     /region_name="Mt_ATP-synt_B"
                     /note="Mitochondrial ATP synthase B chain precursor
                     (ATP-synt_B); pfam05405"
                     /db_xref="CDD:368426"
     CDS             1..284
                     /gene="LOC133064066"
                     /coded_by="XM_061154014.1:443..1297"
                     /db_xref="GeneID:133064066"
ORIGIN      
        1 mvtaammlkd acssrghcgg wiafgrylrm lswvvlsaaa aaapslknaa llgpgalqaa
       61 rilhtgqpsl apvppllehg gkvhfglipe effqflyrkt gvtgpyvlgt rlilyllske
      121 iyvitpetfs aistivflvy vvkkygasvg efadklseqk iaqleevkqa smkqiqdaid
      181 veksqqalvq krhylsdvqr nniamtlevt yrerlhrvyr evknrldyhi svqnmmrqke
      241 qehmiswvek rvvqsisaqq ketiakciad lkllakkaqa qpvl
//
LOCUS       XP_061009998             288 aa            linear   MAM 02-DEC-2023
DEFINITION  syntaxin-1B isoform X1 [Dama dama].
ACCESSION   XP_061009998
VERSION     XP_061009998.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154015.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..288
                     /product="syntaxin-1B isoform X1"
                     /calculated_mol_wt=33144
     Region          29..180
                     /region_name="SynN"
                     /note="Syntaxin N-terminus domain; syntaxins are nervous
                     system-specific proteins implicated in the docking of
                     synaptic vesicles with the presynaptic plasma membrane;
                     they are a family of receptors for intracellular transport
                     vesicles; each target membrane may...; cd00179"
                     /db_xref="CDD:238105"
     Site            order(29,33,40,113..114,117..118,121,124..125,131,134,165)
                     /site_type="active"
                     /note="nSec1 interaction sites [active]"
                     /db_xref="CDD:238105"
     Site            order(60,71,74..75,82,86,89,96,119,124,127,133,140..141,
                     144..145,147..148,151,177)
                     /site_type="active"
                     /note="interdomain interaction site [active]"
                     /db_xref="CDD:238105"
     Site            order(157..167,176..180)
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238105"
     Region          190..258
                     /region_name="SNARE_syntaxin1"
                     /note="SNARE motif of syntaxin 1; cd15880"
                     /db_xref="CDD:277233"
     Site            order(195,197..198,200..205,207..209,211..212,214..216,
                     218..219,221..223,225..226,228..233,235..240,242..247,
                     249..251)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277233"
     Site            order(212,215..216,219..220,222..224,227..233,235..237,
                     239..244)
                     /site_type="other"
                     /note="Munc18 interface [polypeptide binding]"
                     /db_xref="CDD:277233"
     Site            225
                     /site_type="other"
                     /note="zero layer"
                     /db_xref="CDD:277233"
     CDS             1..288
                     /gene="STX1B"
                     /coded_by="XM_061154015.1:63..929"
                     /db_xref="GeneID:133064067"
ORIGIN      
        1 mkdrtqelrs akdsddeeev vhvdrdhfmd effeqveeir gcieklsedv eqvkkqhsai
       61 laapnpdekt kqeledlttd ikktankvrs klkaieqsie qeeglnrssa dlrirktqhs
      121 tlsrkfvevm teynatqsky rdrckdriqr qleitgrttt neeledmles gklaiftddi
      181 kmdsqmtkqa lneietrhne iikletsire lhdmfvdmam lvesqgemid rieynvehsv
      241 dyveravsdt kkavkyqska rrkkimiiic cvvlgvvlas siggtlgl
//
LOCUS       XP_061009999             260 aa            linear   MAM 02-DEC-2023
DEFINITION  syntaxin-1B isoform X2 [Dama dama].
ACCESSION   XP_061009999
VERSION     XP_061009999.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154016.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..260
                     /product="syntaxin-1B isoform X2"
                     /calculated_mol_wt=29774
     Region          1..152
                     /region_name="SynN"
                     /note="Syntaxin N-terminus domain; syntaxins are nervous
                     system-specific proteins implicated in the docking of
                     synaptic vesicles with the presynaptic plasma membrane;
                     they are a family of receptors for intracellular transport
                     vesicles; each target membrane may...; cd00179"
                     /db_xref="CDD:238105"
     Site            order(1,5,12,85..86,89..90,93,96..97,103,106,137)
                     /site_type="active"
                     /note="nSec1 interaction sites [active]"
                     /db_xref="CDD:238105"
     Site            order(32,43,46..47,54,58,61,68,91,96,99,105,112..113,
                     116..117,119..120,123,149)
                     /site_type="active"
                     /note="interdomain interaction site [active]"
                     /db_xref="CDD:238105"
     Site            order(129..139,148..152)
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238105"
     Region          162..230
                     /region_name="SNARE_syntaxin1"
                     /note="SNARE motif of syntaxin 1; cd15880"
                     /db_xref="CDD:277233"
     Site            order(167,169..170,172..177,179..181,183..184,186..188,
                     190..191,193..195,197..198,200..205,207..212,214..219,
                     221..223)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277233"
     Site            order(184,187..188,191..192,194..196,199..205,207..209,
                     211..216)
                     /site_type="other"
                     /note="Munc18 interface [polypeptide binding]"
                     /db_xref="CDD:277233"
     Site            197
                     /site_type="other"
                     /note="zero layer"
                     /db_xref="CDD:277233"
     CDS             1..260
                     /gene="STX1B"
                     /coded_by="XM_061154016.1:102..884"
                     /db_xref="GeneID:133064067"
ORIGIN      
        1 mdeffeqvee irgcieklse dveqvkkqhs ailaapnpde ktkqeledlt tdikktankv
       61 rsklkaieqs ieqeeglnrs sadlrirktq hstlsrkfve vmteynatqs kyrdrckdri
      121 qrqleitgrt ttneeledml esgklaiftd dikmdsqmtk qalneietrh neiikletsi
      181 relhdmfvdm amlvesqgem idrieynveh svdyveravs dtkkavkyqs karrkkimii
      241 iccvvlgvvl assiggtlgl
//
LOCUS       XP_061010000             432 aa            linear   MAM 02-DEC-2023
DEFINITION  septin-14 isoform X1 [Dama dama].
ACCESSION   XP_061010000
VERSION     XP_061010000.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154017.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..432
                     /product="septin-14 isoform X1"
                     /calculated_mol_wt=50015
     Region          49..313
                     /region_name="CDC_Septin"
                     /note="CDC/Septin GTPase family; cd01850"
                     /db_xref="CDD:206649"
     Site            59..66
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206649"
     Site            order(61..67,111,114,194..195,197,249..250)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206649"
     Site            86..94
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206649"
     Site            88
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206649"
     Site            111..114
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206649"
     Site            order(113..149,151..160)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206649"
     Site            194..197
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206649"
     Site            249..251
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206649"
     Region          335..>383
                     /region_name="PRK12704"
                     /note="phosphodiesterase; Provisional"
                     /db_xref="CDD:237177"
     CDS             1..432
                     /gene="SEPTIN14"
                     /coded_by="XM_061154017.1:191..1489"
                     /db_xref="GeneID:133064069"
ORIGIN      
        1 maeepvcpst qipddedrqk ednirclnml ghfgfdclah qlvdksvqqg fffnilcvge
       61 tgigkstlid tlfntnlkdk ksshfyssvg lkiqtyelqe nnvqlkltvv ktvgygdqin
      121 keasyqpivd yldaqfesyl qeelkikrsl gdyhdsrvhv clyfisptgh slksldiltm
      181 knidskvnii pviakadais ksdlqtfkce imnelinngi qiyqfptdde ttthtnssmn
      241 gllpfavvgs tdevkvgkrt vrgrqypwgi lqvenenhcd fvklrdmllc tnmedlkeqt
      301 htrhyeryrr nrlhimgftd mgpnnqpvsf qeiyeakrqe lleqcqseee elkqkfmqrv
      361 keketafkea ekelqdkfeh lkkiqqeetm rleeerrqle eeilafykmk assgtlqgqv
      421 ctsikkdker kk
//
LOCUS       XP_061010001             432 aa            linear   MAM 02-DEC-2023
DEFINITION  septin-14 isoform X1 [Dama dama].
ACCESSION   XP_061010001
VERSION     XP_061010001.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154018.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..432
                     /product="septin-14 isoform X1"
                     /calculated_mol_wt=50015
     Region          49..313
                     /region_name="CDC_Septin"
                     /note="CDC/Septin GTPase family; cd01850"
                     /db_xref="CDD:206649"
     Site            59..66
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206649"
     Site            order(61..67,111,114,194..195,197,249..250)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206649"
     Site            86..94
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206649"
     Site            88
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206649"
     Site            111..114
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206649"
     Site            order(113..149,151..160)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206649"
     Site            194..197
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206649"
     Site            249..251
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206649"
     Region          335..>383
                     /region_name="PRK12704"
                     /note="phosphodiesterase; Provisional"
                     /db_xref="CDD:237177"
     CDS             1..432
                     /gene="SEPTIN14"
                     /coded_by="XM_061154018.1:330..1628"
                     /db_xref="GeneID:133064069"
ORIGIN      
        1 maeepvcpst qipddedrqk ednirclnml ghfgfdclah qlvdksvqqg fffnilcvge
       61 tgigkstlid tlfntnlkdk ksshfyssvg lkiqtyelqe nnvqlkltvv ktvgygdqin
      121 keasyqpivd yldaqfesyl qeelkikrsl gdyhdsrvhv clyfisptgh slksldiltm
      181 knidskvnii pviakadais ksdlqtfkce imnelinngi qiyqfptdde ttthtnssmn
      241 gllpfavvgs tdevkvgkrt vrgrqypwgi lqvenenhcd fvklrdmllc tnmedlkeqt
      301 htrhyeryrr nrlhimgftd mgpnnqpvsf qeiyeakrqe lleqcqseee elkqkfmqrv
      361 keketafkea ekelqdkfeh lkkiqqeetm rleeerrqle eeilafykmk assgtlqgqv
      421 ctsikkdker kk
//
LOCUS       XP_061010002             432 aa            linear   MAM 02-DEC-2023
DEFINITION  septin-14 isoform X1 [Dama dama].
ACCESSION   XP_061010002
VERSION     XP_061010002.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154019.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..432
                     /product="septin-14 isoform X1"
                     /calculated_mol_wt=50015
     Region          49..313
                     /region_name="CDC_Septin"
                     /note="CDC/Septin GTPase family; cd01850"
                     /db_xref="CDD:206649"
     Site            59..66
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206649"
     Site            order(61..67,111,114,194..195,197,249..250)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206649"
     Site            86..94
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206649"
     Site            88
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206649"
     Site            111..114
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206649"
     Site            order(113..149,151..160)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206649"
     Site            194..197
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206649"
     Site            249..251
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206649"
     Region          335..>383
                     /region_name="PRK12704"
                     /note="phosphodiesterase; Provisional"
                     /db_xref="CDD:237177"
     CDS             1..432
                     /gene="SEPTIN14"
                     /coded_by="XM_061154019.1:357..1655"
                     /db_xref="GeneID:133064069"
ORIGIN      
        1 maeepvcpst qipddedrqk ednirclnml ghfgfdclah qlvdksvqqg fffnilcvge
       61 tgigkstlid tlfntnlkdk ksshfyssvg lkiqtyelqe nnvqlkltvv ktvgygdqin
      121 keasyqpivd yldaqfesyl qeelkikrsl gdyhdsrvhv clyfisptgh slksldiltm
      181 knidskvnii pviakadais ksdlqtfkce imnelinngi qiyqfptdde ttthtnssmn
      241 gllpfavvgs tdevkvgkrt vrgrqypwgi lqvenenhcd fvklrdmllc tnmedlkeqt
      301 htrhyeryrr nrlhimgftd mgpnnqpvsf qeiyeakrqe lleqcqseee elkqkfmqrv
      361 keketafkea ekelqdkfeh lkkiqqeetm rleeerrqle eeilafykmk assgtlqgqv
      421 ctsikkdker kk
//
LOCUS       XP_061010004             430 aa            linear   MAM 02-DEC-2023
DEFINITION  septin-14 isoform X2 [Dama dama].
ACCESSION   XP_061010004
VERSION     XP_061010004.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154021.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..430
                     /product="septin-14 isoform X2"
                     /calculated_mol_wt=49789
     Region          47..311
                     /region_name="CDC_Septin"
                     /note="CDC/Septin GTPase family; cd01850"
                     /db_xref="CDD:206649"
     Site            57..64
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206649"
     Site            order(59..65,109,112,192..193,195,247..248)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206649"
     Site            84..92
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206649"
     Site            86
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206649"
     Site            109..112
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206649"
     Site            order(111..147,149..158)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206649"
     Site            192..195
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206649"
     Site            247..249
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206649"
     Region          333..>381
                     /region_name="PRK12704"
                     /note="phosphodiesterase; Provisional"
                     /db_xref="CDD:237177"
     CDS             1..430
                     /gene="SEPTIN14"
                     /coded_by="XM_061154021.1:19..1311"
                     /db_xref="GeneID:133064069"
ORIGIN      
        1 mvaqkcelpn atelkmqked nirclnmlgh fgfdclahql vdksvqqgff fnilcvgetg
       61 igkstlidtl fntnlkdkks shfyssvglk iqtyelqenn vqlkltvvkt vgygdqinke
      121 asyqpivdyl daqfesylqe elkikrslgd yhdsrvhvcl yfisptghsl ksldiltmkn
      181 idskvniipv iakadaisks dlqtfkceim nelinngiqi yqfptddett thtnssmngl
      241 lpfavvgstd evkvgkrtvr grqypwgilq venenhcdfv klrdmllctn medlkeqtht
      301 rhyeryrrnr lhimgftdmg pnnqpvsfqe iyeakrqell eqcqseeeel kqkfmqrvke
      361 ketafkeaek elqdkfehlk kiqqeetmrl eeerrqleee ilafykmkas sgtlqgqvct
      421 sikkdkerkk
//
LOCUS       XP_061010005              98 aa            linear   MAM 02-DEC-2023
DEFINITION  nuclear protein 2 [Dama dama].
ACCESSION   XP_061010005
VERSION     XP_061010005.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154022.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..98
                     /product="nuclear protein 2"
                     /calculated_mol_wt=11404
     Region          27..80
                     /region_name="Phospho_p8"
                     /note="DNA-binding nuclear phosphoprotein p8; pfam10195"
                     /db_xref="CDD:462991"
     CDS             1..98
                     /gene="NUPR2"
                     /coded_by="XM_061154022.1:29..325"
                     /db_xref="GeneID:133064070"
ORIGIN      
        1 mdpavptvqp raqppppgvw ppvgseeefy dcpdyyylrd fpacgagrik grtrrererr
       61 tnwlvpgghe rkiaqkllns qrkrrqrqlq prprtrlt
//
LOCUS       XP_061010006             153 aa            linear   MAM 02-DEC-2023
DEFINITION  elongin-B-like [Dama dama].
ACCESSION   XP_061010006
VERSION     XP_061010006.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154023.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..153
                     /product="elongin-B-like"
                     /calculated_mol_wt=17211
     Region          2..102
                     /region_name="Ubl_ElonginB"
                     /note="ubiquitin-like (Ubl) domain found in transcription
                     elongation factor B (Elongin B) and similar proteins;
                     cd01788"
                     /db_xref="CDD:340486"
     Site            order(4,6,8,11..17,34,43,45,47..49,59,61,66,68..74,80,
                     85..86,88,91..99)
                     /site_type="other"
                     /note="elongin C interaction site [polypeptide binding]"
                     /db_xref="CDD:340486"
     Site            order(4,6,8,11..17,34,43,45,47..49,59,61,66,68..74,80,
                     85..86,88,91..99)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:340486"
     CDS             1..153
                     /gene="LOC133064071"
                     /coded_by="XM_061154023.1:1..462"
                     /db_xref="GeneID:133064071"
ORIGIN      
        1 mdvfvmvrrg kttifteake sstvfelkrv iqgilkrppd eqrlykdyql lddsktlgec
       61 gftsqtalpq apvtvglafr edeafedvci epfpsppelp dvskprdsgs rangqavqss
      121 ydmqrqfnkd kttanrrkhq spldghrykd sea
//
LOCUS       XP_061010007             598 aa            linear   MAM 02-DEC-2023
DEFINITION  polypeptide N-acetylgalactosaminyltransferase 17 [Dama dama].
ACCESSION   XP_061010007
VERSION     XP_061010007.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154024.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..598
                     /product="polypeptide N-acetylgalactosaminyltransferase
                     17"
                     /calculated_mol_wt=67641
     Region          155..454
                     /region_name="pp-GalNAc-T"
                     /note="pp-GalNAc-T initiates the formation of mucin-type
                     O-linked glycans; cd02510"
                     /db_xref="CDD:133004"
     Site            order(159..161,163,192,223,226,230,246..248,327..328,
                     350..351,353,378,381,386)
                     /site_type="active"
                     /note="ligand binding site [active]"
                     /db_xref="CDD:133004"
     Site            order(246,248,378)
                     /site_type="active"
                     /note="Mn binding site [active]"
                     /db_xref="CDD:133004"
     Region          457..598
                     /region_name="beta-trefoil_Ricin_GALNT17"
                     /note="ricin B-type lectin domain, beta-trefoil fold,
                     found in polypeptide N-acetylgalactosaminyltransferase 17
                     (GALNT17) and similar proteins; cd23474"
                     /db_xref="CDD:467352"
     Site            order(480..483,490,492,495,499..500)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:467352"
     Site            order(528..531,537,539,542,549..550)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:467352"
     Site            order(570..573,582,584,587..589)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:467352"
     CDS             1..598
                     /gene="GALNT17"
                     /coded_by="XM_061154024.1:65..1861"
                     /db_xref="GeneID:133064073"
ORIGIN      
        1 maslrrvkvl lvlnliavag fvlflakcrp islrsgdafh eirpraeaan lsahsaspiq
       61 davlkrlsll edivyrqlng lskslglieg yggrgkgglp atlspaeeek akgphekygy
      121 nsylsekisl drsipdyrpt kckelkyske lpqisiifif vnealsvilr svhsavnhtp
      181 thllkeiilv ddnsdeeelk apleeyvhkr ypglvkvvrn qkreglirar iegwkvatgq
      241 vtgffdahve ftagwaepvl sriqenrkrv ilpsidnikq dtfevqryen sahgyswelw
      301 cmyisppkdw wdagdpslpi rtpamigcsf vvnrkffgei glldpgmdvy ggenielgik
      361 vwlcggsmev lpcsrvahie rkkkpynsni gfytkrnalr vaevwmddyk shvyiawnlp
      421 lenpgidigd vserralrks lkcknfqwyl dhvypemrry nntvaygelr nnkakdvcld
      481 qgpmenhtai lypchgwgpq larytregfl hlgalgtttl lpdtrclvdn aksrlpqlld
      541 cdkvksslyk rwnfiqngai mnrgtgrcle venrglagid ltlrsctgqr wtiknsik
//
LOCUS       XP_061010008             248 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein uL30-like [Dama dama].
ACCESSION   XP_061010008
VERSION     XP_061010008.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154025.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083690) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="10"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..248
                     /product="large ribosomal subunit protein uL30-like"
                     /calculated_mol_wt=28814
     Region          16..248
                     /region_name="uL30_euk"
                     /note="60S ribosomal protein uL30, eukaryotic form;
                     TIGR01310"
                     /db_xref="CDD:273548"
     CDS             1..248
                     /gene="LOC133064074"
                     /coded_by="XM_061154025.1:21..767"
                     /db_xref="GeneID:133064074"
ORIGIN      
        1 megaeekkkk vpavpetlkk krknfaelki krlrkkfaqk mlrkarrkli yekakhyhke
       61 yrqmyrteir marmarkagn fyvpaepkla fvirirging vspkvqkvlq llrlrqvfsg
      121 tsvklskasv nmlrivepci awgypnlksv neliykhgyg kinkkrialt dnaliarslg
      181 kygiicmedl iheiytvgkr fkeannflwp fklssprggm kkkithfieg gdagnredqi
      241 nrlirrmn
//
LOCUS       XP_061010020             331 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: olfactory receptor 1N2-like [Dama dama].
ACCESSION   XP_061010020
VERSION     XP_061010020.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154037.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 1% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..331
                     /product="LOW QUALITY PROTEIN: olfactory receptor
                     1N2-like"
                     /calculated_mol_wt=36733
     Region          42..311
                     /region_name="7tmA_OR1_7-like"
                     /note="olfactory receptor families 1, 7, and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15918"
                     /db_xref="CDD:320584"
     Region          43..69
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320584"
     Region          76..102
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320584"
     Site            order(98,101..102,114..119,121..122,125,170,172..176,212,
                     215..217,219..221,223..224,269,272..273,275..276,279,
                     285..286,288..290,293,296..297)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320584"
     Region          114..144
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320584"
     Region          157..178
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320584"
     Region          212..242
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320584"
     Region          249..279
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320584"
     Region          286..311
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320584"
     CDS             1..331
                     /gene="LOC133064214"
                     /coded_by="XM_061154037.1:1..996"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:133064214"
ORIGIN      
        1 mevfylhrxa klqrmgkpsr vnqttlsdfl llgiseqpee qtllfviflg mylvtmmgnl
       61 liilaitsdp hlhtpmyffl anlsitdacf tsasipklli nvhsqsqtis ysgcfaqlyf
      121 llvfggldnl llavmaydry vaicqplhys ttmspqlcal mlsicwvltn cpalthtlll
      181 trvafcahkt iphfycdpsa llklacsdtr inelmiiimg lmfltaplll ivlsyvrisw
      241 avfgisspgg rwkafstcgs hltvvllfyg slmgvyllpp sthsaeresr aailymviip
      301 mlnpfiyslr nkdmnealsk lfssgktisl p
//
LOCUS       XP_061010022             371 aa            linear   MAM 02-DEC-2023
DEFINITION  testis-specific Y-encoded-like protein 6 [Dama dama].
ACCESSION   XP_061010022
VERSION     XP_061010022.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154039.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 16% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..371
                     /product="testis-specific Y-encoded-like protein 6"
                     /calculated_mol_wt=40861
     Region          <10..108
                     /region_name="PHA03378"
                     /note="EBNA-3B; Provisional"
                     /db_xref="CDD:223065"
     Region          170..347
                     /region_name="PTZ00007"
                     /note="(NAP-L) nucleosome assembly protein -L;
                     Provisional; cl08298"
                     /db_xref="CDD:471807"
     CDS             1..371
                     /gene="TSPYL6"
                     /coded_by="XM_061154039.1:1..1116"
                     /db_xref="GeneID:133064224"
ORIGIN      
        1 msegsletva lpplqlpeeg gapqapavas stpqlptaga hgrggarvgp eevgpptegr
       61 eatsasgaan sglgngfqce tggekaletc dtgrseselt aggkaaeakt ergpifpeav
      121 nqeervevek pvgeetevve ehrgleeakg eagaptrteg lhrkalessq levdagnaqa
      181 dpaflqverr yrrlrqhylq wrkhvirhip gfwvtafrnh pqlsalisgr daeifsylad
      241 levkelrrtr mgykfkflfr rnpyfrnkwl vkeyevtpsg qvvslstpii whpgheaqvf
      301 lyrnqdlmcg fvawfsdnsl pepdriaeii kedlwpealq yylldeaphr agllrvrgpv
      361 etprppgfps g
//
LOCUS       XP_061010024             187 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein uL22-like [Dama dama].
ACCESSION   XP_061010024
VERSION     XP_061010024.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154041.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 39% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..187
                     /product="large ribosomal subunit protein uL22-like"
                     /calculated_mol_wt=21538
     Region          1..150
                     /region_name="PTZ00178"
                     /note="60S ribosomal protein L17; Provisional"
                     /db_xref="CDD:240306"
     Site            order(15..16,38..40,42..43,45..46,84..89,97..102,134..135)
                     /site_type="active"
                     /note="putative translocon binding site [active]"
                     /db_xref="CDD:238205"
     Site            order(18,20,23,25..27,30,34,37,82,86,89,101,103..105,107,
                     110,122..127)
                     /site_type="other"
                     /note="protein-rRNA interface [nucleotide binding]"
                     /db_xref="CDD:238205"
     CDS             1..187
                     /gene="LOC133064225"
                     /coded_by="XM_061154041.1:1..564"
                     /db_xref="GeneID:133064225"
ORIGIN      
        1 mvrysldpen ptkscksrgs nlhvhfkntr etaqaikcmh irkatkypkd vtlkkqcakq
       61 wgwtqgrwpk ksaefllhml knadsnaelk gldvdslvie hiqvnkapkm rwrtyrahgr
      121 inpymsssch temiltekeq ivpkpeeeva qkkkisqkkl kkqklmareq mpqkvnanks
      181 ksvgcld
//
LOCUS       XP_061010025             194 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein eL18-like [Dama dama].
ACCESSION   XP_061010025
VERSION     XP_061010025.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154042.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..194
                     /product="large ribosomal subunit protein eL18-like"
                     /calculated_mol_wt=22021
     Region          2..167
                     /region_name="Ribosomal_L18"
                     /note="Ribosomal protein 60S L18 and 50S L18e; pfam17135"
                     /db_xref="CDD:465358"
     CDS             1..194
                     /gene="LOC133064227"
                     /coded_by="XM_061154042.1:31..615"
                     /db_xref="GeneID:133064227"
ORIGIN      
        1 mgvdirhnkd rkvrrkepks qdiylrllvk lyrflarrtn stfnqvvlkr lfmsrtnrpp
       61 lslsrmirkm klpgregkta vvvgavtddv rvqevpklkv calrvssrar srilkaggkm
      121 ltfdqlalds pkgcgtvlls gprkapgtph shtkpcvrsk rrkferavat ktnprvylvi
      181 kkildalkkk rteq
//
LOCUS       XP_061010026             319 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: C1GALT1-specific chaperone 1-like protein,
            partial [Dama dama].
ACCESSION   XP_061010026
VERSION     XP_061010026.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154043.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 5% of CDS bases
            frameshifts          :: corrected 5 indels
            internal stop codons :: corrected 4 genomic stop codons
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         <1..319
                     /product="LOW QUALITY PROTEIN: C1GALT1-specific chaperone
                     1-like protein"
     CDS             1..319
                     /gene="C1GALT1C1L"
                     /coded_by="XM_061154043.1:<1..960"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 5 bases in 3 codons;
                     deleted 2 bases in 2 codons; substituted 4 bases at 4
                     genomic stop codons"
                     /db_xref="GeneID:133064229"
ORIGIN      
        1 kavlvgsicc ilvsmfgqit sqhrxnsrpx xapslrppnr kdllnisevq hmelsksici
       61 fciihenpmx rhwvlkesyt khcdkaehhn tknnglxikn dtwtqmrkmy kyvsgkhsns
      121 hnwfflahpt ifavtensry iqftkdvsqp fclghtvtsg nldfmtvegg aaltmeamkr
      181 itdfxislha cpekyanqsv iwnlsedrql avclkyagvp aesxedskgr ilfntkptth
      241 liqetvshnp eqvvegccsd taitfngltp enmivmtygv yqprafghyf sntliflspd
      301 dsenhrglgn nrtvlskst
//
LOCUS       XP_061010027             345 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133064230 [Dama dama].
ACCESSION   XP_061010027
VERSION     XP_061010027.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154044.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..345
                     /product="uncharacterized protein LOC133064230"
                     /calculated_mol_wt=38667
     CDS             1..345
                     /gene="LOC133064230"
                     /coded_by="XM_061154044.1:1..1038"
                     /db_xref="GeneID:133064230"
ORIGIN      
        1 mnsccstssq afgvvrvldf dhsnsccked qncqpkcpad qltsdllhrg assviqptkf
       61 ldfkaarpsp mlkgisrkrs kisssssnmp fypdflerrr slfpkfqkss msfhsvqsra
      121 nfdseekrsf sdlkspsehf rfrsrsifct pklsiiscye nastfdasss cifnpnevei
      181 isknsnitga ekyihsyppe cnttyfmnsk skmnssagwd tvatlhqska tmltlpsiis
      241 ysseqhgidn diqerdqlrs nsvyptfqsh srntspamvq qhpsqsvtcp vlnnveftsf
      301 yknvsgfalp qnevtsdpfe dennalsfkd edksslneip kirsp
//
LOCUS       XP_061010029             642 aa            linear   MAM 02-DEC-2023
DEFINITION  diphthine methyltransferase [Dama dama].
ACCESSION   XP_061010029
VERSION     XP_061010029.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154046.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 16% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..642
                     /product="diphthine methyltransferase"
                     /calculated_mol_wt=69068
     Region          274..321
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          327..373
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <369..475
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          382..419
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          425..461
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          468..509
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..642
                     /gene="DPH7"
                     /coded_by="XM_061154046.1:1..1929"
                     /db_xref="GeneID:133064236"
ORIGIN      
        1 mvrlhsalsl gggredtlah lgpsgaaavt htpggsgrgg vtspaggprd leltwvpsvl
       61 ytllsppgaa cgcgwdpgps wlapgptwph rlpavsrdal rppasrgrgs aasrgrpwgk
      121 kslpgrglas taeveavpst rlggpsrrap alravnvdtl lrlcralpat tavaassgca
      181 gadgrvqllq avdtehtvds vewcplpgcr hllacgtyql wkpedrpadr esqseldvde
      241 ppirlgrlyl yscnedsspc plvevqrrdt saildmkwch vpvaghpllg vadasgsiel
      301 lrlvpseqdt wtlqpcsrla lekqclalsl dwstgkagra sdqplkiiss dskgqlhllk
      361 iseagpglqa vvtwqahrfe awvaafnywq tevvysggdd gllkgwdtrt pgtaafssrr
      421 hsmgvcsiqs sphrenvlat gsydehvllw dtrslwrpla dvpvqggvwr lkwhpfhrdl
      481 llaacmhggf tiinyqtaae qeqeavslsy plpnslvygt dwswlyfcrl pqtqpsfpgs
      541 dpeartadqd palkvadpsp apsseclads dgvggtthqd gskleaplqp saedkkdvrl
      601 ptsgikicdc dqdleaadfd inllatcsfy nhvlhlwkwe ni
//
LOCUS       XP_061010030             915 aa            linear   MAM 02-DEC-2023
DEFINITION  negative elongation factor B [Dama dama].
ACCESSION   XP_061010030
VERSION     XP_061010030.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154047.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 26% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..915
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..915
                     /product="negative elongation factor B"
                     /calculated_mol_wt=99540
     Region          3..>326
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          442..785
                     /region_name="COBRA1"
                     /note="Cofactor of BRCA1 (COBRA1); pfam06209"
                     /db_xref="CDD:461851"
     CDS             1..915
                     /gene="NELFB"
                     /coded_by="XM_061154047.1:1..2748"
                     /db_xref="GeneID:133064237"
ORIGIN      
        1 mkprppgavl slpleltapr pgllplspsd ppsrpanpse lrmrrahplt iyggaagsse
       61 fcvladrwps pravlqtwpa adlsavpasg gvqlpdsprl pkdpvssarv vqarlrptda
      121 lgftlnpfnr chesysrgag iipfrreakg kggeeskfqd ervlqlvgae pcsrvrfpga
      181 rprtafypar gswpreagrg raggqggawl ggagpvggas aaipassghr lralsllgag
      241 rgappgnpca taaafpgspl aggpgcaerk waaagraerr cgrdlaeleg agersaggpr
      301 gpgdrtaagp vasaaapger ggdgvpgrvg tgasalfagl qdlgvanged lketltncte
      361 plkaieqfqt engvllpslq salpfldlhg tprlefhqsv fdelrdklle rvsaiasegk
      421 aeerykkled lleksfslvk mpslqpvvmc vmkhlpkvpe kklklvmadk elyracavev
      481 krqiwqdnqa lfgdevspll kqyivekesa lfstelsvlh nffspspktr rqgevvqrlt
      541 rmvgrnvkly dmvlqflrtl flrtrnvhyc tlraellmsl hdldvgdics vdpchkftwc
      601 ldacirerfv dskrarelqg fldgvkkgqe qvlgdlsmil cdpfaintls lstvrhlqel
      661 vgqevlprds pdlllllrll algqgawdmi dsqvfkepkm evelvtrflp mlmsfvvddh
      721 tfnvdqklpa eekapvtypn tlpesftkfl qeqrmacevg lyyvlhitkq rnknallrll
      781 pglvetfgdl afgdiflhll tgslallade faledfcssl fdgflltasp rkesvqrhvl
      841 rlllhlhhrv apsklealqk aleptgqsge avkelysqlg ekleqldhrk pspaqapetp
      901 alelplpavp aptvl
//
LOCUS       XP_061010032             354 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat-containing protein 26 [Dama dama].
ACCESSION   XP_061010032
VERSION     XP_061010032.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154049.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..354
                     /product="leucine-rich repeat-containing protein 26"
                     /calculated_mol_wt=37390
     Region          <64..>204
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          76..98
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          99..122
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          123..146
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          147..170
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          171..194
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..354
                     /gene="LRRC26"
                     /coded_by="XM_061154049.1:1..1065"
                     /db_xref="GeneID:133064238"
ORIGIN      
        1 mrspsfpswg pppplqllll llpwpvwtqv paaaaswgtp gavdcpeacv capggqancs
       61 gralpavpgg lnwrvrvlll nhnrvhalpp gafadagall rldlrenglr wvharafwgl
      121 galeqldlsa nqleallpgt faplralral slaenrlarl epaalgalpl lralslqdnd
      181 lpalasglla glpnlntlrl rgnpwtcgca lrplcawlrg hprhapgeps gartgragry
      241 phnrltqrpc paeaetllcv spgrltlspl tafpeaafsh carplaardl avvyalgpvs
      301 flaslavcla lgsaftacga rhrrrhraaa rrqqrrqpdp gprtaspaat asqa
//
LOCUS       XP_061010033             740 aa            linear   MAM 02-DEC-2023
DEFINITION  endoplasmic reticulum mannosyl-oligosaccharide
            1,2-alpha-mannosidase-like [Dama dama].
ACCESSION   XP_061010033
VERSION     XP_061010033.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154050.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 17% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..740
                     /product="endoplasmic reticulum mannosyl-oligosaccharide
                     1,2-alpha-mannosidase-like"
                     /calculated_mol_wt=83000
     Region          297..736
                     /region_name="Glyco_hydro_47"
                     /note="Glycosyl hydrolase family 47; pfam01532"
                     /db_xref="CDD:460241"
     CDS             1..740
                     /gene="LOC133064240"
                     /coded_by="XM_061154050.1:1..2223"
                     /db_xref="GeneID:133064240"
ORIGIN      
        1 mersgagras fawfaegkql tarlqedtrv kstprlgapr arggaerhha aeppgkarsp
       61 qafagepggd rldqsrilvr gaepgngrag fcaravpgsr rrptprrqrr gagmhprpap
      121 pggalalspg wrpdgggarg pcwpwrkwkq lsrlqrtvvl fllavlmlfg lrsyvhvade
      181 wtavdsrsaa awqmrpanpp vlpaprkaae npetvaglsp qkpqrhfrrg ppnlqtrapd
      241 gdaqerswtg agtkaeqgar hppkkakvpr wpfqqqvltt qasqasqner qkavvdaflh
      301 awagyrkfaw ghdelkpltr sfsewfglgl tlidaldtmw ilglkkefqe arnwvskrll
      361 fqkdvdvnlf estirilggl lsafhlsgdv lfltkaedfg nrlmpafrtp skipysfvni
      421 gtgvahpprw tsdstvaevt siqlefrels rltgdkkfqe aaeevtrrvh alrgkldglv
      481 pmfistnsgs fthlgvftlg aradsyyeyl lkqwiqggkk esqlledyle avdgirkhll
      541 akseprkltf vgelnhgrfs akmdhlvcfl pgtlalgvhh glpaehmela qalmdtcyqm
      601 yrqmetglsp eiahfnlhht mfvkdvqvkv adrhnllrpe tveslfylyr ltgdrkyqdw
      661 gweilhsfnt ytrvpsggys sisnvqdprh pqprdkmesf flgetlkyly llfsddpdll
      721 sldtyvfnte ahplpiwaps
//
LOCUS       XP_061010034             447 aa            linear   MAM 02-DEC-2023
DEFINITION  chloride intracellular channel protein 3 [Dama dama].
ACCESSION   XP_061010034
VERSION     XP_061010034.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154051.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 41% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..447
                     /product="chloride intracellular channel protein 3"
                     /calculated_mol_wt=47572
     Region          201..418
                     /region_name="O-ClC"
                     /note="intracellular chloride channel protein; TIGR00862"
                     /db_xref="CDD:129941"
     CDS             1..447
                     /gene="CLIC3"
                     /coded_by="XM_061154051.1:1..1344"
                     /db_xref="GeneID:133064241"
ORIGIN      
        1 mvaaygseaq aprpqyvqrg cqagpgrgga ldleegacrp hgghqaarrl hspplgpara
       61 ggaasglyra gawqpvpaev tplggpglrr agrsenvkeg srarpgpaaa aptmaetgkl
      121 qlfvkalkgq garpqsqgpt ptpfilapcp asgplaapqt ppprdqvkgp hqplveavpe
      181 ragalgllwp lgsgslqdsw asedgesvgh cpscqrlfmi lllkgvpftl ttvdtrrspe
      241 vlkdfapgsq lpillcdgda ktdtlqieef leetlgppef pslapryres aaagndvfhk
      301 fsafiknpvp aqddalyqql lraltkldsy lraplehelg repqlresrr rfldgdqltl
      361 adcgllpklh vvntvcthfr qapipaelrg vhryldcalq ekefkytcph saeilaayrp
      421 varpasapaa patcplvrsp ikaplpq
//
LOCUS       XP_061010035             238 aa            linear   MAM 02-DEC-2023
DEFINITION  lipocalin-1-like [Dama dama].
ACCESSION   XP_061010035
VERSION     XP_061010035.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154052.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 32% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..238
                     /product="lipocalin-1-like"
                     /calculated_mol_wt=25893
     Region          92..234
                     /region_name="lipocalin_FABP"
                     /note="lipocalin/cytosolic fatty acid-binding protein
                     family; cl10502"
                     /db_xref="CDD:471979"
     Site            order(94,98,120,122,130,132,134,145,147,149,158,160,165,
                     167,169,178,180,182,193,195,197)
                     /site_type="other"
                     /note="ligand binding cavity [chemical binding]"
                     /db_xref="CDD:381182"
     CDS             1..238
                     /gene="LOC133064242"
                     /coded_by="XM_061154052.1:1..717"
                     /db_xref="GeneID:133064242"
ORIGIN      
        1 masadsepgw geegprgspa glrqhqhver rhpaawgedl girpgspcgp grspsprrls
       61 vrpqemrall ltlglvaslq aqvtpvldsl tedvsgkwyl kavttdqdvl gkdqesvlam
      121 tfsvleggdl eakvtsqadg rcqetsllle ktddpgryta yggrrevfil plrardhfil
      181 ycegelagrq vrmarllgrn lenspealve ftefaeaqsl nleifrplqs etcspggn
//
LOCUS       XP_061010036            1293 aa            linear   MAM 02-DEC-2023
DEFINITION  histone-lysine N-methyltransferase EHMT1 isoform X1 [Dama dama].
ACCESSION   XP_061010036
VERSION     XP_061010036.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154053.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1293
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1293
                     /product="histone-lysine N-methyltransferase EHMT1 isoform
                     X1"
                     /calculated_mol_wt=139369
     Region          <67..264
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          514..644
                     /region_name="EHMT_ZBD"
                     /note="Zinc-binding domain of euchromatic histone lysine
                     methyltransferases EHMT1 and EHTM2; cd20905"
                     /db_xref="CDD:411018"
     Region          720..976
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          742..768
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          774..803
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(805,807,811..812,815..817,819..820,824,827,836,838,
                     840,844..845,848..850,852..853,857,860,870,872,874,
                     878..879,882..884,886..887,891,894,903)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          805..836
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          838..870
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          872..903
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          905..936
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          938..969
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1036..1266
                     /region_name="SET_EHMT1"
                     /note="SET domain (including pre-SET and post-SET domains)
                     found in euchromatic histone-lysine N-methyltransferase 1
                     (EHMT1) and similar proteins; cd10535"
                     /db_xref="CDD:380933"
     Site            order(1136..1138,1155,1162,1165..1166,1168,1171..1176,
                     1179,1186,1197..1201,1209,1211,1224,1240,1242,1245..1246,
                     1249..1250,1254..1258)
                     /site_type="active"
                     /db_xref="CDD:380933"
     Site            order(1136..1138,1172..1173,1197..1201,1242,1246,
                     1254..1258)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380933"
     Site            order(1162,1165..1166,1168,1171,1174,1176,1186,1245..1246,
                     1249..1250)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:380933"
     Site            order(1203,1256,1258,1263)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380933"
     CDS             1..1293
                     /gene="EHMT1"
                     /coded_by="XM_061154053.1:41..3922"
                     /db_xref="GeneID:133064243"
ORIGIN      
        1 maaadaeavp akgetkqdcg lgaelpsegs pmaaddgsae qqggeapvaa dgetngscdq
       61 sdasglaaav khpqestrgs pqegagpgar iaengildrd pevgkqnhir sdgfpqspvv
      121 gsngyflgka plsepplrva stlasslpgh aaktlpggag kgrtpgafpq ppaavpakpg
      181 eggkdtedkk alapgadvkv hrarktmpks ipglhaaskd pregrdardh eepkeelsrg
      241 asefarqqls ppfpslhqsl pqnqcyvata kaqtaclpfv laaavsrkkk rrmgtyslvp
      301 kkktkvlkqr tviemfksit hstggskgek dlsdgslhvn gesldldsee ddseeldede
      361 dqggppaaaf paedgraskd gmlapdrsqk vdgeseeeqe sagtadeeed gdesdlsses
      421 sikkkflkrk gkpdspwikp arkrrrrskk kpcsvlgsea yasssgsaep tapgdgggym
      481 evpldsldlr vkgaltsdte glangpdage tdglqevplc scrmetpksr eittlannqc
      541 matesvdhql grctnsvvkh elmrpsskap llvlcedhrg rmvkhqccpg cgyfctagnf
      601 mecqpessis hrfhkacasr vnnasycphc geetskakev tiakadttst vtlapgqeks
      661 cavegradtt tgsaagpmls eddkpqslap qvpegfdptg paglgkpapg lsqgpgketl
      721 esalialdse kpkklrfhpk qlyfsarqge lqkvllmlvd gidpnfkmeh qnkrsplhaa
      781 aeaghvdich mliqaganid tcsedqrtpl meaaennhld avkylikaga lvdpkdaegs
      841 tclhlaakkg hydvvqylls ngqmdvncqd dggwtpmiwa teykhvdlvk lllskgsdin
      901 irdneenicl hwaafsgcvd iaeillaarc dlhavnihgd splhiaared ryacvvlfls
      961 rdsdvtlknk egetplqcas lnsqvwsalq vsqalrdaap drpapvektv srdiargyer
     1021 ipipcvngvd gepcpsnyky vsqncvtspm nidrnithlq ycvciddcss sncmcgqlsm
     1081 rcwydkdgrl lpefnmaepp llfecnhacs cwrtcrnrvv qnglrarlql yrtqnmgwgv
     1141 rslqdiplgt fvceyvgeli sdseadvree dsylfdldnk dgelycidar fygnvsrfin
     1201 hhcepnlvpv rvfmshqdlr fpriaffstr lieageqlgf dygqrfwdik gklfscrcgs
     1261 pkcrhsgaal aqrqagaqed glpdtssspa dpl
//
LOCUS       XP_061010037            1286 aa            linear   MAM 02-DEC-2023
DEFINITION  histone-lysine N-methyltransferase EHMT1 isoform X2 [Dama dama].
ACCESSION   XP_061010037
VERSION     XP_061010037.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154054.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1286
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1286
                     /product="histone-lysine N-methyltransferase EHMT1 isoform
                     X2"
                     /calculated_mol_wt=138707
     Region          <67..264
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          507..637
                     /region_name="EHMT_ZBD"
                     /note="Zinc-binding domain of euchromatic histone lysine
                     methyltransferases EHMT1 and EHTM2; cd20905"
                     /db_xref="CDD:411018"
     Region          713..969
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          735..761
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          767..796
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(798,800,804..805,808..810,812..813,817,820,829,831,
                     833,837..838,841..843,845..846,850,853,863,865,867,
                     871..872,875..877,879..880,884,887,896)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          798..829
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          831..863
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          865..896
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          898..929
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          931..962
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1029..1259
                     /region_name="SET_EHMT1"
                     /note="SET domain (including pre-SET and post-SET domains)
                     found in euchromatic histone-lysine N-methyltransferase 1
                     (EHMT1) and similar proteins; cd10535"
                     /db_xref="CDD:380933"
     Site            order(1129..1131,1148,1155,1158..1159,1161,1164..1169,
                     1172,1179,1190..1194,1202,1204,1217,1233,1235,1238..1239,
                     1242..1243,1247..1251)
                     /site_type="active"
                     /db_xref="CDD:380933"
     Site            order(1129..1131,1165..1166,1190..1194,1235,1239,
                     1247..1251)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380933"
     Site            order(1155,1158..1159,1161,1164,1167,1169,1179,1238..1239,
                     1242..1243)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:380933"
     Site            order(1196,1249,1251,1256)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380933"
     CDS             1..1286
                     /gene="EHMT1"
                     /coded_by="XM_061154054.1:16..3876"
                     /db_xref="GeneID:133064243"
ORIGIN      
        1 mnaslpqavp akgetkqdcg lgaelpsegs pmaaddgsae qqggeapvaa dgetngscdq
       61 sdasglaaav khpqestrgs pqegagpgar iaengildrd pevgkqnhir sdgfpqspvv
      121 gsngyflgka plsepplrva stlasslpgh aaktlpggag kgrtpgafpq ppaavpakpg
      181 eggkdtedkk alapgadvkv hrarktmpks ipglhaaskd pregrdardh eepkeelsrg
      241 asefarqqls ppfpslhqsl pqnqcyvata kaqtaaavsr kkkrrmgtys lvpkkktkvl
      301 kqrtviemfk sithstggsk gekdlsdgsl hvngesldld seeddseeld ededqggppa
      361 aafpaedgra skdgmlapdr sqkvdgesee eqesagtade eedgdesdls sessikkkfl
      421 krkgkpdspw ikparkrrrr skkkpcsvlg seayasssgs aeptapgdgg gymevpldsl
      481 dlrvkgalts dteglangpd agetdglqev plcscrmetp ksreittlan nqcmatesvd
      541 hqlgrctnsv vkhelmrpss kapllvlced hrgrmvkhqc cpgcgyfcta gnfmecqpes
      601 sishrfhkac asrvnnasyc phcgeetska kevtiakadt tstvtlapgq ekscavegra
      661 dtttgsaagp mlseddkpqs lapqvpegfd ptgpaglgkp apglsqgpgk etlesalial
      721 dsekpkklrf hpkqlyfsar qgelqkvllm lvdgidpnfk mehqnkrspl haaaeaghvd
      781 ichmliqaga nidtcsedqr tplmeaaenn hldavkylik agalvdpkda egstclhlaa
      841 kkghydvvqy llsngqmdvn cqddggwtpm iwateykhvd lvklllskgs dinirdneen
      901 iclhwaafsg cvdiaeilla arcdlhavni hgdsplhiaa redryacvvl flsrdsdvtl
      961 knkegetplq caslnsqvws alqvsqalrd aapdrpapve ktvsrdiarg yeripipcvn
     1021 gvdgepcpsn ykyvsqncvt spmnidrnit hlqycvcidd csssncmcgq lsmrcwydkd
     1081 grllpefnma eppllfecnh acscwrtcrn rvvqnglrar lqlyrtqnmg wgvrslqdip
     1141 lgtfvceyvg elisdseadv reedsylfdl dnkdgelyci darfygnvsr finhhcepnl
     1201 vpvrvfmshq dlrfpriaff strlieageq lgfdygqrfw dikgklfscr cgspkcrhsg
     1261 aalaqrqaga qedglpdtss spadpl
//
LOCUS       XP_061010038            1285 aa            linear   MAM 02-DEC-2023
DEFINITION  histone-lysine N-methyltransferase EHMT1 isoform X3 [Dama dama].
ACCESSION   XP_061010038
VERSION     XP_061010038.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154055.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1285
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1285
                     /product="histone-lysine N-methyltransferase EHMT1 isoform
                     X3"
                     /calculated_mol_wt=138554
     Region          <67..264
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          506..636
                     /region_name="EHMT_ZBD"
                     /note="Zinc-binding domain of euchromatic histone lysine
                     methyltransferases EHMT1 and EHTM2; cd20905"
                     /db_xref="CDD:411018"
     Region          712..968
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          734..760
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          766..795
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(797,799,803..804,807..809,811..812,816,819,828,830,
                     832,836..837,840..842,844..845,849,852,862,864,866,
                     870..871,874..876,878..879,883,886,895)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          797..828
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          830..862
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          864..895
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          897..928
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          930..961
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1028..1258
                     /region_name="SET_EHMT1"
                     /note="SET domain (including pre-SET and post-SET domains)
                     found in euchromatic histone-lysine N-methyltransferase 1
                     (EHMT1) and similar proteins; cd10535"
                     /db_xref="CDD:380933"
     Site            order(1128..1130,1147,1154,1157..1158,1160,1163..1168,
                     1171,1178,1189..1193,1201,1203,1216,1232,1234,1237..1238,
                     1241..1242,1246..1250)
                     /site_type="active"
                     /db_xref="CDD:380933"
     Site            order(1128..1130,1164..1165,1189..1193,1234,1238,
                     1246..1250)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380933"
     Site            order(1154,1157..1158,1160,1163,1166,1168,1178,1237..1238,
                     1241..1242)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:380933"
     Site            order(1195,1248,1250,1255)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380933"
     CDS             1..1285
                     /gene="EHMT1"
                     /coded_by="XM_061154055.1:41..3898"
                     /db_xref="GeneID:133064243"
ORIGIN      
        1 maaadaeavp akgetkqdcg lgaelpsegs pmaaddgsae qqggeapvaa dgetngscdq
       61 sdasglaaav khpqestrgs pqegagpgar iaengildrd pevgkqnhir sdgfpqspvv
      121 gsngyflgka plsepplrva stlasslpgh aaktlpggag kgrtpgafpq ppaavpakpg
      181 eggkdtedkk alapgadvkv hrarktmpks ipglhaaskd pregrdardh eepkeelsrg
      241 asefarqqls ppfpslhqsl pqnqcyvata kaqtaavsrk kkrrmgtysl vpkkktkvlk
      301 qrtviemfks ithstggskg ekdlsdgslh vngesldlds eeddseelde dedqggppaa
      361 afpaedgras kdgmlapdrs qkvdgeseee qesagtadee edgdesdlss essikkkflk
      421 rkgkpdspwi kparkrrrrs kkkpcsvlgs eayasssgsa eptapgdggg ymevpldsld
      481 lrvkgaltsd teglangpda getdglqevp lcscrmetpk sreittlann qcmatesvdh
      541 qlgrctnsvv khelmrpssk apllvlcedh rgrmvkhqcc pgcgyfctag nfmecqpess
      601 ishrfhkaca srvnnasycp hcgeetskak evtiakadtt stvtlapgqe kscavegrad
      661 tttgsaagpm lseddkpqsl apqvpegfdp tgpaglgkpa pglsqgpgke tlesaliald
      721 sekpkklrfh pkqlyfsarq gelqkvllml vdgidpnfkm ehqnkrsplh aaaeaghvdi
      781 chmliqagan idtcsedqrt plmeaaennh ldavkylika galvdpkdae gstclhlaak
      841 kghydvvqyl lsngqmdvnc qddggwtpmi wateykhvdl vklllskgsd inirdneeni
      901 clhwaafsgc vdiaeillaa rcdlhavnih gdsplhiaar edryacvvlf lsrdsdvtlk
      961 nkegetplqc aslnsqvwsa lqvsqalrda apdrpapvek tvsrdiargy eripipcvng
     1021 vdgepcpsny kyvsqncvts pmnidrnith lqycvciddc sssncmcgql smrcwydkdg
     1081 rllpefnmae ppllfecnha cscwrtcrnr vvqnglrarl qlyrtqnmgw gvrslqdipl
     1141 gtfvceyvge lisdseadvr eedsylfdld nkdgelycid arfygnvsrf inhhcepnlv
     1201 pvrvfmshqd lrfpriaffs trlieageql gfdygqrfwd ikgklfscrc gspkcrhsga
     1261 alaqrqagaq edglpdtsss padpl
//
LOCUS       XP_061010040            1285 aa            linear   MAM 02-DEC-2023
DEFINITION  histone-lysine N-methyltransferase EHMT1 isoform X4 [Dama dama].
ACCESSION   XP_061010040
VERSION     XP_061010040.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154057.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1285
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1285
                     /product="histone-lysine N-methyltransferase EHMT1 isoform
                     X4"
                     /calculated_mol_wt=138594
     Region          <67..264
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          506..636
                     /region_name="EHMT_ZBD"
                     /note="Zinc-binding domain of euchromatic histone lysine
                     methyltransferases EHMT1 and EHTM2; cd20905"
                     /db_xref="CDD:411018"
     Region          712..968
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          734..760
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          766..795
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(797,799,803..804,807..809,811..812,816,819,828,830,
                     832,836..837,840..842,844..845,849,852,862,864,866,
                     870..871,874..876,878..879,883,886,895)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          797..828
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          830..862
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          864..895
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          897..928
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          930..961
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1028..1258
                     /region_name="SET_EHMT1"
                     /note="SET domain (including pre-SET and post-SET domains)
                     found in euchromatic histone-lysine N-methyltransferase 1
                     (EHMT1) and similar proteins; cd10535"
                     /db_xref="CDD:380933"
     Site            order(1128..1130,1147,1154,1157..1158,1160,1163..1168,
                     1171,1178,1189..1193,1201,1203,1216,1232,1234,1237..1238,
                     1241..1242,1246..1250)
                     /site_type="active"
                     /db_xref="CDD:380933"
     Site            order(1128..1130,1164..1165,1189..1193,1234,1238,
                     1246..1250)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380933"
     Site            order(1154,1157..1158,1160,1163,1166,1168,1178,1237..1238,
                     1241..1242)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:380933"
     Site            order(1195,1248,1250,1255)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380933"
     CDS             1..1285
                     /gene="EHMT1"
                     /coded_by="XM_061154057.1:41..3898"
                     /db_xref="GeneID:133064243"
ORIGIN      
        1 maaadaeavp akgetkqdcg lgaelpsegs pmaaddgsae qqggeapvaa dgetngscdq
       61 sdasglaaav khpqestrgs pqegagpgar iaengildrd pevgkqnhir sdgfpqspvv
      121 gsngyflgka plsepplrva stlasslpgh aaktlpggag kgrtpgafpq ppaavpakpg
      181 eggkdtedkk alapgadvkv hrarktmpks ipglhaaskd pregrdardh eepkeelsrg
      241 asefarqqls ppfpslhqsl pqnqcyvata kaqtaclpfv laaavsrkkk rrmgtyslvp
      301 kkktkvlkqr tviemfksit hstggskgek dlsdgslhvn gesldldsee ddseeldede
      361 dqggppaaaf paedgraskd gmlapdrsqk vdgeseeeqe sagtadeeed gdesdlsses
      421 sikkkflkrk gkpdspwikp arkrrrrskk kpcsvlgsea yasssgsaep tapgdgggym
      481 evpldsldlr vkglangpda getdglqevp lcscrmetpk sreittlann qcmatesvdh
      541 qlgrctnsvv khelmrpssk apllvlcedh rgrmvkhqcc pgcgyfctag nfmecqpess
      601 ishrfhkaca srvnnasycp hcgeetskak evtiakadtt stvtlapgqe kscavegrad
      661 tttgsaagpm lseddkpqsl apqvpegfdp tgpaglgkpa pglsqgpgke tlesaliald
      721 sekpkklrfh pkqlyfsarq gelqkvllml vdgidpnfkm ehqnkrsplh aaaeaghvdi
      781 chmliqagan idtcsedqrt plmeaaennh ldavkylika galvdpkdae gstclhlaak
      841 kghydvvqyl lsngqmdvnc qddggwtpmi wateykhvdl vklllskgsd inirdneeni
      901 clhwaafsgc vdiaeillaa rcdlhavnih gdsplhiaar edryacvvlf lsrdsdvtlk
      961 nkegetplqc aslnsqvwsa lqvsqalrda apdrpapvek tvsrdiargy eripipcvng
     1021 vdgepcpsny kyvsqncvts pmnidrnith lqycvciddc sssncmcgql smrcwydkdg
     1081 rllpefnmae ppllfecnha cscwrtcrnr vvqnglrarl qlyrtqnmgw gvrslqdipl
     1141 gtfvceyvge lisdseadvr eedsylfdld nkdgelycid arfygnvsrf inhhcepnlv
     1201 pvrvfmshqd lrfpriaffs trlieageql gfdygqrfwd ikgklfscrc gspkcrhsga
     1261 alaqrqagaq edglpdtsss padpl
//
LOCUS       XP_061010041            1262 aa            linear   MAM 02-DEC-2023
DEFINITION  histone-lysine N-methyltransferase EHMT1 isoform X5 [Dama dama].
ACCESSION   XP_061010041
VERSION     XP_061010041.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154058.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1262
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1262
                     /product="histone-lysine N-methyltransferase EHMT1 isoform
                     X5"
                     /calculated_mol_wt=136386
     Region          <36..233
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          483..613
                     /region_name="EHMT_ZBD"
                     /note="Zinc-binding domain of euchromatic histone lysine
                     methyltransferases EHMT1 and EHTM2; cd20905"
                     /db_xref="CDD:411018"
     Region          689..945
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          711..737
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          743..772
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(774,776,780..781,784..786,788..789,793,796,805,807,
                     809,813..814,817..819,821..822,826,829,839,841,843,
                     847..848,851..853,855..856,860,863,872)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          774..805
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          807..839
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          841..872
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          874..905
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          907..938
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1005..1235
                     /region_name="SET_EHMT1"
                     /note="SET domain (including pre-SET and post-SET domains)
                     found in euchromatic histone-lysine N-methyltransferase 1
                     (EHMT1) and similar proteins; cd10535"
                     /db_xref="CDD:380933"
     Site            order(1105..1107,1124,1131,1134..1135,1137,1140..1145,
                     1148,1155,1166..1170,1178,1180,1193,1209,1211,1214..1215,
                     1218..1219,1223..1227)
                     /site_type="active"
                     /db_xref="CDD:380933"
     Site            order(1105..1107,1141..1142,1166..1170,1211,1215,
                     1223..1227)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380933"
     Site            order(1131,1134..1135,1137,1140,1143,1145,1155,1214..1215,
                     1218..1219)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:380933"
     Site            order(1172,1225,1227,1232)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380933"
     CDS             1..1262
                     /gene="EHMT1"
                     /coded_by="XM_061154058.1:593..4381"
                     /db_xref="GeneID:133064243"
ORIGIN      
        1 maaddgsaeq qggeapvaad getngscdqs dasglaaavk hpqestrgsp qegagpgari
       61 aengildrdp evgkqnhirs dgfpqspvvg sngyflgkap lsepplrvas tlasslpgha
      121 aktlpggagk grtpgafpqp paavpakpge ggkdtedkka lapgadvkvh rarktmpksi
      181 pglhaaskdp regrdardhe epkeelsrga sefarqqlsp pfpslhqslp qnqcyvatak
      241 aqtaclpfvl aaavsrkkkr rmgtyslvpk kktkvlkqrt viemfksith stggskgekd
      301 lsdgslhvng esldldseed dseeldeded qggppaaafp aedgraskdg mlapdrsqkv
      361 dgeseeeqes agtadeeedg desdlssess ikkkflkrkg kpdspwikpa rkrrrrskkk
      421 pcsvlgseay asssgsaept apgdgggyme vpldsldlrv kgaltsdteg langpdaget
      481 dglqevplcs crmetpksre ittlannqcm atesvdhqlg rctnsvvkhe lmrpsskapl
      541 lvlcedhrgr mvkhqccpgc gyfctagnfm ecqpessish rfhkacasrv nnasycphcg
      601 eetskakevt iakadttstv tlapgqeksc avegradttt gsaagpmlse ddkpqslapq
      661 vpegfdptgp aglgkpapgl sqgpgketle salialdsek pkklrfhpkq lyfsarqgel
      721 qkvllmlvdg idpnfkmehq nkrsplhaaa eaghvdichm liqaganidt csedqrtplm
      781 eaaennhlda vkylikagal vdpkdaegst clhlaakkgh ydvvqyllsn gqmdvncqdd
      841 ggwtpmiwat eykhvdlvkl llskgsdini rdneeniclh waafsgcvdi aeillaarcd
      901 lhavnihgds plhiaaredr yacvvlflsr dsdvtlknke getplqcasl nsqvwsalqv
      961 sqalrdaapd rpapvektvs rdiargyeri pipcvngvdg epcpsnykyv sqncvtspmn
     1021 idrnithlqy cvciddcsss ncmcgqlsmr cwydkdgrll pefnmaeppl lfecnhacsc
     1081 wrtcrnrvvq nglrarlqly rtqnmgwgvr slqdiplgtf vceyvgelis dseadvreed
     1141 sylfdldnkd gelycidarf ygnvsrfinh hcepnlvpvr vfmshqdlrf priaffstrl
     1201 ieageqlgfd ygqrfwdikg klfscrcgsp kcrhsgaala qrqagaqedg lpdtssspad
     1261 pl
//
LOCUS       XP_061010042            1262 aa            linear   MAM 02-DEC-2023
DEFINITION  histone-lysine N-methyltransferase EHMT1 isoform X5 [Dama dama].
ACCESSION   XP_061010042
VERSION     XP_061010042.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154059.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1262
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1262
                     /product="histone-lysine N-methyltransferase EHMT1 isoform
                     X5"
                     /calculated_mol_wt=136386
     Region          <36..233
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          483..613
                     /region_name="EHMT_ZBD"
                     /note="Zinc-binding domain of euchromatic histone lysine
                     methyltransferases EHMT1 and EHTM2; cd20905"
                     /db_xref="CDD:411018"
     Region          689..945
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          711..737
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          743..772
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(774,776,780..781,784..786,788..789,793,796,805,807,
                     809,813..814,817..819,821..822,826,829,839,841,843,
                     847..848,851..853,855..856,860,863,872)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          774..805
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          807..839
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          841..872
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          874..905
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          907..938
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1005..1235
                     /region_name="SET_EHMT1"
                     /note="SET domain (including pre-SET and post-SET domains)
                     found in euchromatic histone-lysine N-methyltransferase 1
                     (EHMT1) and similar proteins; cd10535"
                     /db_xref="CDD:380933"
     Site            order(1105..1107,1124,1131,1134..1135,1137,1140..1145,
                     1148,1155,1166..1170,1178,1180,1193,1209,1211,1214..1215,
                     1218..1219,1223..1227)
                     /site_type="active"
                     /db_xref="CDD:380933"
     Site            order(1105..1107,1141..1142,1166..1170,1211,1215,
                     1223..1227)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380933"
     Site            order(1131,1134..1135,1137,1140,1143,1145,1155,1214..1215,
                     1218..1219)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:380933"
     Site            order(1172,1225,1227,1232)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380933"
     CDS             1..1262
                     /gene="EHMT1"
                     /coded_by="XM_061154059.1:219..4007"
                     /db_xref="GeneID:133064243"
ORIGIN      
        1 maaddgsaeq qggeapvaad getngscdqs dasglaaavk hpqestrgsp qegagpgari
       61 aengildrdp evgkqnhirs dgfpqspvvg sngyflgkap lsepplrvas tlasslpgha
      121 aktlpggagk grtpgafpqp paavpakpge ggkdtedkka lapgadvkvh rarktmpksi
      181 pglhaaskdp regrdardhe epkeelsrga sefarqqlsp pfpslhqslp qnqcyvatak
      241 aqtaclpfvl aaavsrkkkr rmgtyslvpk kktkvlkqrt viemfksith stggskgekd
      301 lsdgslhvng esldldseed dseeldeded qggppaaafp aedgraskdg mlapdrsqkv
      361 dgeseeeqes agtadeeedg desdlssess ikkkflkrkg kpdspwikpa rkrrrrskkk
      421 pcsvlgseay asssgsaept apgdgggyme vpldsldlrv kgaltsdteg langpdaget
      481 dglqevplcs crmetpksre ittlannqcm atesvdhqlg rctnsvvkhe lmrpsskapl
      541 lvlcedhrgr mvkhqccpgc gyfctagnfm ecqpessish rfhkacasrv nnasycphcg
      601 eetskakevt iakadttstv tlapgqeksc avegradttt gsaagpmlse ddkpqslapq
      661 vpegfdptgp aglgkpapgl sqgpgketle salialdsek pkklrfhpkq lyfsarqgel
      721 qkvllmlvdg idpnfkmehq nkrsplhaaa eaghvdichm liqaganidt csedqrtplm
      781 eaaennhlda vkylikagal vdpkdaegst clhlaakkgh ydvvqyllsn gqmdvncqdd
      841 ggwtpmiwat eykhvdlvkl llskgsdini rdneeniclh waafsgcvdi aeillaarcd
      901 lhavnihgds plhiaaredr yacvvlflsr dsdvtlknke getplqcasl nsqvwsalqv
      961 sqalrdaapd rpapvektvs rdiargyeri pipcvngvdg epcpsnykyv sqncvtspmn
     1021 idrnithlqy cvciddcsss ncmcgqlsmr cwydkdgrll pefnmaeppl lfecnhacsc
     1081 wrtcrnrvvq nglrarlqly rtqnmgwgvr slqdiplgtf vceyvgelis dseadvreed
     1141 sylfdldnkd gelycidarf ygnvsrfinh hcepnlvpvr vfmshqdlrf priaffstrl
     1201 ieageqlgfd ygqrfwdikg klfscrcgsp kcrhsgaala qrqagaqedg lpdtssspad
     1261 pl
//
LOCUS       XP_061010043            1262 aa            linear   MAM 02-DEC-2023
DEFINITION  histone-lysine N-methyltransferase EHMT1 isoform X5 [Dama dama].
ACCESSION   XP_061010043
VERSION     XP_061010043.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154060.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1262
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1262
                     /product="histone-lysine N-methyltransferase EHMT1 isoform
                     X5"
                     /calculated_mol_wt=136386
     Region          <36..233
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          483..613
                     /region_name="EHMT_ZBD"
                     /note="Zinc-binding domain of euchromatic histone lysine
                     methyltransferases EHMT1 and EHTM2; cd20905"
                     /db_xref="CDD:411018"
     Region          689..945
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          711..737
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          743..772
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(774,776,780..781,784..786,788..789,793,796,805,807,
                     809,813..814,817..819,821..822,826,829,839,841,843,
                     847..848,851..853,855..856,860,863,872)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          774..805
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          807..839
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          841..872
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          874..905
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          907..938
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1005..1235
                     /region_name="SET_EHMT1"
                     /note="SET domain (including pre-SET and post-SET domains)
                     found in euchromatic histone-lysine N-methyltransferase 1
                     (EHMT1) and similar proteins; cd10535"
                     /db_xref="CDD:380933"
     Site            order(1105..1107,1124,1131,1134..1135,1137,1140..1145,
                     1148,1155,1166..1170,1178,1180,1193,1209,1211,1214..1215,
                     1218..1219,1223..1227)
                     /site_type="active"
                     /db_xref="CDD:380933"
     Site            order(1105..1107,1141..1142,1166..1170,1211,1215,
                     1223..1227)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380933"
     Site            order(1131,1134..1135,1137,1140,1143,1145,1155,1214..1215,
                     1218..1219)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:380933"
     Site            order(1172,1225,1227,1232)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380933"
     CDS             1..1262
                     /gene="EHMT1"
                     /coded_by="XM_061154060.1:289..4077"
                     /db_xref="GeneID:133064243"
ORIGIN      
        1 maaddgsaeq qggeapvaad getngscdqs dasglaaavk hpqestrgsp qegagpgari
       61 aengildrdp evgkqnhirs dgfpqspvvg sngyflgkap lsepplrvas tlasslpgha
      121 aktlpggagk grtpgafpqp paavpakpge ggkdtedkka lapgadvkvh rarktmpksi
      181 pglhaaskdp regrdardhe epkeelsrga sefarqqlsp pfpslhqslp qnqcyvatak
      241 aqtaclpfvl aaavsrkkkr rmgtyslvpk kktkvlkqrt viemfksith stggskgekd
      301 lsdgslhvng esldldseed dseeldeded qggppaaafp aedgraskdg mlapdrsqkv
      361 dgeseeeqes agtadeeedg desdlssess ikkkflkrkg kpdspwikpa rkrrrrskkk
      421 pcsvlgseay asssgsaept apgdgggyme vpldsldlrv kgaltsdteg langpdaget
      481 dglqevplcs crmetpksre ittlannqcm atesvdhqlg rctnsvvkhe lmrpsskapl
      541 lvlcedhrgr mvkhqccpgc gyfctagnfm ecqpessish rfhkacasrv nnasycphcg
      601 eetskakevt iakadttstv tlapgqeksc avegradttt gsaagpmlse ddkpqslapq
      661 vpegfdptgp aglgkpapgl sqgpgketle salialdsek pkklrfhpkq lyfsarqgel
      721 qkvllmlvdg idpnfkmehq nkrsplhaaa eaghvdichm liqaganidt csedqrtplm
      781 eaaennhlda vkylikagal vdpkdaegst clhlaakkgh ydvvqyllsn gqmdvncqdd
      841 ggwtpmiwat eykhvdlvkl llskgsdini rdneeniclh waafsgcvdi aeillaarcd
      901 lhavnihgds plhiaaredr yacvvlflsr dsdvtlknke getplqcasl nsqvwsalqv
      961 sqalrdaapd rpapvektvs rdiargyeri pipcvngvdg epcpsnykyv sqncvtspmn
     1021 idrnithlqy cvciddcsss ncmcgqlsmr cwydkdgrll pefnmaeppl lfecnhacsc
     1081 wrtcrnrvvq nglrarlqly rtqnmgwgvr slqdiplgtf vceyvgelis dseadvreed
     1141 sylfdldnkd gelycidarf ygnvsrfinh hcepnlvpvr vfmshqdlrf priaffstrl
     1201 ieageqlgfd ygqrfwdikg klfscrcgsp kcrhsgaala qrqagaqedg lpdtssspad
     1261 pl
//
LOCUS       XP_061010044            1245 aa            linear   MAM 02-DEC-2023
DEFINITION  histone-lysine N-methyltransferase EHMT1 isoform X6 [Dama dama].
ACCESSION   XP_061010044
VERSION     XP_061010044.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154061.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1245
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1245
                     /product="histone-lysine N-methyltransferase EHMT1 isoform
                     X6"
                     /calculated_mol_wt=134054
     Region          <67..264
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          514..596
                     /region_name="EHMT_ZBD"
                     /note="Zinc-binding domain of euchromatic histone lysine
                     methyltransferases EHMT1 and EHTM2; cd20905"
                     /db_xref="CDD:411018"
     Region          672..928
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          694..720
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          726..755
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(757,759,763..764,767..769,771..772,776,779,788,790,
                     792,796..797,800..802,804..805,809,812,822,824,826,
                     830..831,834..836,838..839,843,846,855)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          757..788
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          790..822
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          824..855
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          857..888
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          890..921
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          988..1218
                     /region_name="SET_EHMT1"
                     /note="SET domain (including pre-SET and post-SET domains)
                     found in euchromatic histone-lysine N-methyltransferase 1
                     (EHMT1) and similar proteins; cd10535"
                     /db_xref="CDD:380933"
     Site            order(1088..1090,1107,1114,1117..1118,1120,1123..1128,
                     1131,1138,1149..1153,1161,1163,1176,1192,1194,1197..1198,
                     1201..1202,1206..1210)
                     /site_type="active"
                     /db_xref="CDD:380933"
     Site            order(1088..1090,1124..1125,1149..1153,1194,1198,
                     1206..1210)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380933"
     Site            order(1114,1117..1118,1120,1123,1126,1128,1138,1197..1198,
                     1201..1202)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:380933"
     Site            order(1155,1208,1210,1215)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380933"
     CDS             1..1245
                     /gene="EHMT1"
                     /coded_by="XM_061154061.1:41..3778"
                     /db_xref="GeneID:133064243"
ORIGIN      
        1 maaadaeavp akgetkqdcg lgaelpsegs pmaaddgsae qqggeapvaa dgetngscdq
       61 sdasglaaav khpqestrgs pqegagpgar iaengildrd pevgkqnhir sdgfpqspvv
      121 gsngyflgka plsepplrva stlasslpgh aaktlpggag kgrtpgafpq ppaavpakpg
      181 eggkdtedkk alapgadvkv hrarktmpks ipglhaaskd pregrdardh eepkeelsrg
      241 asefarqqls ppfpslhqsl pqnqcyvata kaqtaclpfv laaavsrkkk rrmgtyslvp
      301 kkktkvlkqr tviemfksit hstggskgek dlsdgslhvn gesldldsee ddseeldede
      361 dqggppaaaf paedgraskd gmlapdrsqk vdgeseeeqe sagtadeeed gdesdlsses
      421 sikkkflkrk gkpdspwikp arkrrrrskk kpcsvlgsea yasssgsaep tapgdgggym
      481 evpldsldlr vkgaltsdte glangpdage tdglqevplc scrmetpksr eittlannqc
      541 matesvdhqg nfmecqpess ishrfhkaca srvnnasycp hcgeetskak evtiakadtt
      601 stvtlapgqe kscavegrad tttgsaagpm lseddkpqsl apqvpegfdp tgpaglgkpa
      661 pglsqgpgke tlesaliald sekpkklrfh pkqlyfsarq gelqkvllml vdgidpnfkm
      721 ehqnkrsplh aaaeaghvdi chmliqagan idtcsedqrt plmeaaennh ldavkylika
      781 galvdpkdae gstclhlaak kghydvvqyl lsngqmdvnc qddggwtpmi wateykhvdl
      841 vklllskgsd inirdneeni clhwaafsgc vdiaeillaa rcdlhavnih gdsplhiaar
      901 edryacvvlf lsrdsdvtlk nkegetplqc aslnsqvwsa lqvsqalrda apdrpapvek
      961 tvsrdiargy eripipcvng vdgepcpsny kyvsqncvts pmnidrnith lqycvciddc
     1021 sssncmcgql smrcwydkdg rllpefnmae ppllfecnha cscwrtcrnr vvqnglrarl
     1081 qlyrtqnmgw gvrslqdipl gtfvceyvge lisdseadvr eedsylfdld nkdgelycid
     1141 arfygnvsrf inhhcepnlv pvrvfmshqd lrfpriaffs trlieageql gfdygqrfwd
     1201 ikgklfscrc gspkcrhsga alaqrqagaq edglpdtsss padpl
//
LOCUS       XP_061010045            1141 aa            linear   MAM 02-DEC-2023
DEFINITION  histone-lysine N-methyltransferase EHMT1 isoform X7 [Dama dama].
ACCESSION   XP_061010045
VERSION     XP_061010045.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154062.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1141
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1141
                     /product="histone-lysine N-methyltransferase EHMT1 isoform
                     X7"
                     /calculated_mol_wt=125412
     Region          362..492
                     /region_name="EHMT_ZBD"
                     /note="Zinc-binding domain of euchromatic histone lysine
                     methyltransferases EHMT1 and EHTM2; cd20905"
                     /db_xref="CDD:411018"
     Region          568..824
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          590..616
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          622..651
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(653,655,659..660,663..665,667..668,672,675,684,686,
                     688,692..693,696..698,700..701,705,708,718,720,722,
                     726..727,730..732,734..735,739,742,751)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          653..684
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          686..718
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          720..751
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          753..784
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          786..817
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          884..1114
                     /region_name="SET_EHMT1"
                     /note="SET domain (including pre-SET and post-SET domains)
                     found in euchromatic histone-lysine N-methyltransferase 1
                     (EHMT1) and similar proteins; cd10535"
                     /db_xref="CDD:380933"
     Site            order(984..986,1003,1010,1013..1014,1016,1019..1024,1027,
                     1034,1045..1049,1057,1059,1072,1088,1090,1093..1094,
                     1097..1098,1102..1106)
                     /site_type="active"
                     /db_xref="CDD:380933"
     Site            order(984..986,1020..1021,1045..1049,1090,1094,1102..1106)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380933"
     Site            order(1010,1013..1014,1016,1019,1022,1024,1034,1093..1094,
                     1097..1098)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:380933"
     Site            order(1051,1104,1106,1111)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380933"
     CDS             1..1141
                     /gene="EHMT1"
                     /coded_by="XM_061154062.1:22..3447"
                     /db_xref="GeneID:133064243"
ORIGIN      
        1 mrwnqlrvnk nrpgccadcc rqacvgknsl rkmsspqvlr rrfqrrgrps rtvawepscr
       61 akhaaskdpr egrdardhee pkeelsrgas efarqqlspp fpslhqslpq nqcyvataka
      121 qtaclpfvla aavsrkkkrr mgtyslvpkk ktkvlkqrtv iemfksiths tggskgekdl
      181 sdgslhvnge sldldseedd seeldededq ggppaaafpa edgraskdgm lapdrsqkvd
      241 geseeeqesa gtadeeedgd esdlssessi kkkflkrkgk pdspwikpar krrrrskkkp
      301 csvlgseaya sssgsaepta pgdgggymev pldsldlrvk galtsdtegl angpdagetd
      361 glqevplcsc rmetpksrei ttlannqcma tesvdhqlgr ctnsvvkhel mrpsskapll
      421 vlcedhrgrm vkhqccpgcg yfctagnfme cqpessishr fhkacasrvn nasycphcge
      481 etskakevti akadttstvt lapgqeksca vegradtttg saagpmlsed dkpqslapqv
      541 pegfdptgpa glgkpapgls qgpgketles alialdsekp kklrfhpkql yfsarqgelq
      601 kvllmlvdgi dpnfkmehqn krsplhaaae aghvdichml iqaganidtc sedqrtplme
      661 aaennhldav kylikagalv dpkdaegstc lhlaakkghy dvvqyllsng qmdvncqddg
      721 gwtpmiwate ykhvdlvkll lskgsdinir dneeniclhw aafsgcvdia eillaarcdl
      781 havnihgdsp lhiaaredry acvvlflsrd sdvtlknkeg etplqcasln sqvwsalqvs
      841 qalrdaapdr papvektvsr diargyerip ipcvngvdge pcpsnykyvs qncvtspmni
      901 drnithlqyc vciddcsssn cmcgqlsmrc wydkdgrllp efnmaeppll fecnhacscw
      961 rtcrnrvvqn glrarlqlyr tqnmgwgvrs lqdiplgtfv ceyvgelisd seadvreeds
     1021 ylfdldnkdg elycidarfy gnvsrfinhh cepnlvpvrv fmshqdlrfp riaffstrli
     1081 eageqlgfdy gqrfwdikgk lfscrcgspk crhsgaalaq rqagaqedgl pdtssspadp
     1141 l
//
LOCUS       XP_061010046            1105 aa            linear   MAM 02-DEC-2023
DEFINITION  histone-lysine N-methyltransferase EHMT1 isoform X8 [Dama dama].
ACCESSION   XP_061010046
VERSION     XP_061010046.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154063.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1105
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1105
                     /product="histone-lysine N-methyltransferase EHMT1 isoform
                     X8"
                     /calculated_mol_wt=121281
     Region          326..456
                     /region_name="EHMT_ZBD"
                     /note="Zinc-binding domain of euchromatic histone lysine
                     methyltransferases EHMT1 and EHTM2; cd20905"
                     /db_xref="CDD:411018"
     Region          532..788
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          554..580
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          586..615
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(617,619,623..624,627..629,631..632,636,639,648,650,
                     652,656..657,660..662,664..665,669,672,682,684,686,
                     690..691,694..696,698..699,703,706,715)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          617..648
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          650..682
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          684..715
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          717..748
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          750..781
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          848..1078
                     /region_name="SET_EHMT1"
                     /note="SET domain (including pre-SET and post-SET domains)
                     found in euchromatic histone-lysine N-methyltransferase 1
                     (EHMT1) and similar proteins; cd10535"
                     /db_xref="CDD:380933"
     Site            order(948..950,967,974,977..978,980,983..988,991,998,
                     1009..1013,1021,1023,1036,1052,1054,1057..1058,1061..1062,
                     1066..1070)
                     /site_type="active"
                     /db_xref="CDD:380933"
     Site            order(948..950,984..985,1009..1013,1054,1058,1066..1070)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380933"
     Site            order(974,977..978,980,983,986,988,998,1057..1058,
                     1061..1062)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:380933"
     Site            order(1015,1068,1070,1075)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380933"
     CDS             1..1105
                     /gene="EHMT1"
                     /coded_by="XM_061154063.1:16..3333"
                     /db_xref="GeneID:133064243"
ORIGIN      
        1 makerrfqrr grpsrtvawe pscrakhaas kdpregrdar dheepkeels rgasefarqq
       61 lsppfpslhq slpqnqcyva takaqtaclp fvlaaavsrk kkrrmgtysl vpkkktkvlk
      121 qrtviemfks ithstggskg ekdlsdgslh vngesldlds eeddseelde dedqggppaa
      181 afpaedgras kdgmlapdrs qkvdgeseee qesagtadee edgdesdlss essikkkflk
      241 rkgkpdspwi kparkrrrrs kkkpcsvlgs eayasssgsa eptapgdggg ymevpldsld
      301 lrvkgaltsd teglangpda getdglqevp lcscrmetpk sreittlann qcmatesvdh
      361 qlgrctnsvv khelmrpssk apllvlcedh rgrmvkhqcc pgcgyfctag nfmecqpess
      421 ishrfhkaca srvnnasycp hcgeetskak evtiakadtt stvtlapgqe kscavegrad
      481 tttgsaagpm lseddkpqsl apqvpegfdp tgpaglgkpa pglsqgpgke tlesaliald
      541 sekpkklrfh pkqlyfsarq gelqkvllml vdgidpnfkm ehqnkrsplh aaaeaghvdi
      601 chmliqagan idtcsedqrt plmeaaennh ldavkylika galvdpkdae gstclhlaak
      661 kghydvvqyl lsngqmdvnc qddggwtpmi wateykhvdl vklllskgsd inirdneeni
      721 clhwaafsgc vdiaeillaa rcdlhavnih gdsplhiaar edryacvvlf lsrdsdvtlk
      781 nkegetplqc aslnsqvwsa lqvsqalrda apdrpapvek tvsrdiargy eripipcvng
      841 vdgepcpsny kyvsqncvts pmnidrnith lqycvciddc sssncmcgql smrcwydkdg
      901 rllpefnmae ppllfecnha cscwrtcrnr vvqnglrarl qlyrtqnmgw gvrslqdipl
      961 gtfvceyvge lisdseadvr eedsylfdld nkdgelycid arfygnvsrf inhhcepnlv
     1021 pvrvfmshqd lrfpriaffs trlieageql gfdygqrfwd ikgklfscrc gspkcrhsga
     1081 alaqrqagaq edglpdtsss padpl
//
LOCUS       XP_061010047            1103 aa            linear   MAM 02-DEC-2023
DEFINITION  histone-lysine N-methyltransferase EHMT1 isoform X9 [Dama dama].
ACCESSION   XP_061010047
VERSION     XP_061010047.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154064.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1103
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1103
                     /product="histone-lysine N-methyltransferase EHMT1 isoform
                     X9"
                     /calculated_mol_wt=121050
     Region          324..454
                     /region_name="EHMT_ZBD"
                     /note="Zinc-binding domain of euchromatic histone lysine
                     methyltransferases EHMT1 and EHTM2; cd20905"
                     /db_xref="CDD:411018"
     Region          530..786
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          552..578
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          584..613
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(615,617,621..622,625..627,629..630,634,637,646,648,
                     650,654..655,658..660,662..663,667,670,680,682,684,
                     688..689,692..694,696..697,701,704,713)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          615..646
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          648..680
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          682..713
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          715..746
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          748..779
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          846..1076
                     /region_name="SET_EHMT1"
                     /note="SET domain (including pre-SET and post-SET domains)
                     found in euchromatic histone-lysine N-methyltransferase 1
                     (EHMT1) and similar proteins; cd10535"
                     /db_xref="CDD:380933"
     Site            order(946..948,965,972,975..976,978,981..986,989,996,
                     1007..1011,1019,1021,1034,1050,1052,1055..1056,1059..1060,
                     1064..1068)
                     /site_type="active"
                     /db_xref="CDD:380933"
     Site            order(946..948,982..983,1007..1011,1052,1056,1064..1068)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380933"
     Site            order(972,975..976,978,981,984,986,996,1055..1056,
                     1059..1060)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:380933"
     Site            order(1013,1066,1068,1073)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380933"
     CDS             1..1103
                     /gene="EHMT1"
                     /coded_by="XM_061154064.1:50..3361"
                     /db_xref="GeneID:133064243"
ORIGIN      
        1 mprrfqrrgr psrtvaweps crakhaaskd pregrdardh eepkeelsrg asefarqqls
       61 ppfpslhqsl pqnqcyvata kaqtaclpfv laaavsrkkk rrmgtyslvp kkktkvlkqr
      121 tviemfksit hstggskgek dlsdgslhvn gesldldsee ddseeldede dqggppaaaf
      181 paedgraskd gmlapdrsqk vdgeseeeqe sagtadeeed gdesdlsses sikkkflkrk
      241 gkpdspwikp arkrrrrskk kpcsvlgsea yasssgsaep tapgdgggym evpldsldlr
      301 vkgaltsdte glangpdage tdglqevplc scrmetpksr eittlannqc matesvdhql
      361 grctnsvvkh elmrpsskap llvlcedhrg rmvkhqccpg cgyfctagnf mecqpessis
      421 hrfhkacasr vnnasycphc geetskakev tiakadttst vtlapgqeks cavegradtt
      481 tgsaagpmls eddkpqslap qvpegfdptg paglgkpapg lsqgpgketl esalialdse
      541 kpkklrfhpk qlyfsarqge lqkvllmlvd gidpnfkmeh qnkrsplhaa aeaghvdich
      601 mliqaganid tcsedqrtpl meaaennhld avkylikaga lvdpkdaegs tclhlaakkg
      661 hydvvqylls ngqmdvncqd dggwtpmiwa teykhvdlvk lllskgsdin irdneenicl
      721 hwaafsgcvd iaeillaarc dlhavnihgd splhiaared ryacvvlfls rdsdvtlknk
      781 egetplqcas lnsqvwsalq vsqalrdaap drpapvektv srdiargyer ipipcvngvd
      841 gepcpsnyky vsqncvtspm nidrnithlq ycvciddcss sncmcgqlsm rcwydkdgrl
      901 lpefnmaepp llfecnhacs cwrtcrnrvv qnglrarlql yrtqnmgwgv rslqdiplgt
      961 fvceyvgeli sdseadvree dsylfdldnk dgelycidar fygnvsrfin hhcepnlvpv
     1021 rvfmshqdlr fpriaffstr lieageqlgf dygqrfwdik gklfscrcgs pkcrhsgaal
     1081 aqrqagaqed glpdtssspa dpl
//
LOCUS       XP_061010048             426 aa            linear   MAM 02-DEC-2023
DEFINITION  arrestin domain-containing protein 1 [Dama dama].
ACCESSION   XP_061010048
VERSION     XP_061010048.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154065.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..426
                     /product="arrestin domain-containing protein 1"
                     /calculated_mol_wt=45550
     Region          7..139
                     /region_name="Arrestin_N"
                     /note="Arrestin (or S-antigen), N-terminal domain;
                     cl22903"
                     /db_xref="CDD:451447"
     Region          162..284
                     /region_name="Arrestin_C"
                     /note="Arrestin (or S-antigen), C-terminal domain;
                     pfam02752"
                     /db_xref="CDD:460676"
     Region          <290..421
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..426
                     /gene="ARRDC1"
                     /coded_by="XM_061154065.1:69..1349"
                     /db_xref="GeneID:133064244"
ORIGIN      
        1 mgrvqlfevr lnhgrvvysp geplvgavrv rltaplpfra irvtctgscr vsnkandsaw
       61 vveesyfnsa lsladkgslp agehsfpfqf llpataptsf egpfgkivhq vratidtprf
      121 skdhqcsrvf yilsplnlns ipdieqpnva sttkkfsykl vktgsvvlta stdlrgyvvg
      181 qvlrlqadie nqsgkdtspv vasllqkvsy kakrwiydvr tiaevegagv kawrraqwqe
      241 qvlvpalpqs alpgcslihv dyylqvslkq peavvtlpvf igniavnhvp lsprpgpglv
      301 vpsappqeea eavasgphff sdpvslstks hsqqqqppaa lgsvphsape prpqdgspap
      361 hplppplcis tgatvpyfae gcggpvptss tlilppeyss wgypyeapps yeqscggvdp
      421 gltpgs
//
LOCUS       XP_061010050             227 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger MYND domain-containing protein 19 [Dama dama].
ACCESSION   XP_061010050
VERSION     XP_061010050.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154067.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..227
                     /product="zinc finger MYND domain-containing protein 19"
                     /calculated_mol_wt=26302
     Region          66..105
                     /region_name="HNH_3"
                     /note="HNH endonuclease; pfam13392"
                     /db_xref="CDD:433169"
     Region          174..212
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     CDS             1..227
                     /gene="ZMYND19"
                     /coded_by="XM_061154067.1:82..765"
                     /db_xref="GeneID:133064245"
ORIGIN      
        1 mtdfklgivr lgrvagktky tlideqdipl vegysfearm evdadgngak ifayafdknr
       61 grgsgrllhe llwerhrggi apgfqvvhln avtvdnrldn lqlvpwgwrp raeetsskqr
      121 eqslywlaiq qlptdpieeq fpvlnvtryy nangdvveee etsctyyech yppctmiekq
      181 lrefnicgrc qvarycgsqc qqkdwpahkk hcrekrrpfp heleper
//
LOCUS       XP_061010051            1347 aa            linear   MAM 02-DEC-2023
DEFINITION  patatin-like phospholipase domain-containing protein 7 isoform X1
            [Dama dama].
ACCESSION   XP_061010051
VERSION     XP_061010051.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154068.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1347
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1347
                     /product="patatin-like phospholipase domain-containing
                     protein 7 isoform X1"
                     /calculated_mol_wt=148736
     Region          28..>59
                     /region_name="TM_EGFR-like"
                     /note="Transmembrane domain of the Epidermal Growth Factor
                     Receptor family of Protein Tyrosine Kinases; cd12087"
                     /db_xref="CDD:213052"
     Site            order(30,33..34,37..38,40..42,44..45,48)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:213052"
     Region          169..290
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(239..240,249..251)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(277..279,283..285)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          495..605
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(565..566,575..577)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(597..599,603..605)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          618..726
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(681..682,691..693)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(713..715,719..721)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          947..1252
                     /region_name="Pat_PNPLA6_PNPLA7"
                     /note="Patatin-like phospholipase domain containing
                     protein 6 and protein 7; cd07225"
                     /db_xref="CDD:132864"
     Site            order(969..970,972,997,1117)
                     /site_type="active"
                     /db_xref="CDD:132864"
     Site            995..999
                     /site_type="other"
                     /note="nucleophile elbow"
                     /db_xref="CDD:132864"
     CDS             1..1347
                     /gene="PNPLA7"
                     /coded_by="XM_061154068.1:184..4227"
                     /db_xref="GeneID:133064246"
ORIGIN      
        1 meqeedtgpe vgfylatlws wglelmeqhs qstmllgivt gvllalalig ttiifvyrrv
       61 sqfrqvqpsp qyrfrkrdkv mfygrkimrk vtmlphtlvg ntaaprqrvr krakvlslak
      121 rilrfkkeyp slqpkeppps lleadltefd vknshlpsev lymlknvrvl ghfekplfle
      181 lckhmvfvql legeyifrpg eldnsiyvvq dgrlevcvqd sdgtevtvke vlagdsvhsl
      241 lsildvitgh aapyktvsar aavpstilrl pamafqgvfe rypetlvrvv qiimvrlqrv
      301 tflalhnylg lttelfnpes qaiplvsvas vtagkakkpm ccsleerper pprpqepcsp
      361 gsarpradll psdrggsrta vcgplpkrsh pillpsvhee vvaelsqaqa giqassapag
      421 atagatsdlr mvcdqarvpp hseerpggsv askprksvvv aetplavlpn sdstldesva
      481 skktdsilra atqdlltlmk lddpslldgr vtlvhvaggt vvlrqgdqdt silfvvsgll
      541 hvyqrkidse edtflfmarp gemvgqlavl tgepliftir anrdcsflsi skahfydimr
      601 rqpavvlsva htvvrrvssf vrqidfaldw meveagraiy rqgdksdcty ivlsgrlrav
      661 iqkddgkkrl ageygrgdlv gvvealtrqa rattvhaird selaklpega lnsikrqypq
      721 vvtrlirllg ekilgslqqg aaaghqfrfh tvgskwdsgn pasnlstvav mpvsedvplt
      781 aftlelkhal saigpalllt sdsikqrlgs aaldsiheyr lsswlgqqed ihrivlyqad
      841 gtltpwtqcc irqadcilvv glgeqeptvg elermletsa vraqkqlvll hrqdgpapar
      901 tvdwlnmrgw csghlhlccp rrvfsrrslp klvelyervc qrppdrhsdf srlarvltgn
      961 aialvlgggg argcaqvgii raltecgipv dmvggtsiga fmgalyseer sysqirirak
     1021 qwaedmmsmv ktmldltypi tsmfsgagfn ssissifkdr qiedlwipyf tittdisasa
     1081 mrvhtdgslw ryvrasmsls gympplcdpk dghllmdggy innlpadvar smgakvviai
     1141 dvgsrdetdl tnygdalsgw wllwkrwnpl atkvkvlnma eiqtrlayvc cvrqlemvks
     1201 sdyceylrpp idsygtlefn kfdeicevgy qhgravfdiw srsgvlektl qdrqgtskmk
     1261 awdvltcpna sftdlaeivs riepakvaag dggdphgpav cpdesdyqte yeevllggpk
     1321 dayvdlqsap adqgsdsede pslrhqh
//
LOCUS       XP_061010052            1347 aa            linear   MAM 02-DEC-2023
DEFINITION  patatin-like phospholipase domain-containing protein 7 isoform X1
            [Dama dama].
ACCESSION   XP_061010052
VERSION     XP_061010052.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154069.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1347
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1347
                     /product="patatin-like phospholipase domain-containing
                     protein 7 isoform X1"
                     /calculated_mol_wt=148736
     Region          28..>59
                     /region_name="TM_EGFR-like"
                     /note="Transmembrane domain of the Epidermal Growth Factor
                     Receptor family of Protein Tyrosine Kinases; cd12087"
                     /db_xref="CDD:213052"
     Site            order(30,33..34,37..38,40..42,44..45,48)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:213052"
     Region          169..290
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(239..240,249..251)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(277..279,283..285)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          495..605
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(565..566,575..577)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(597..599,603..605)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          618..726
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(681..682,691..693)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(713..715,719..721)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          947..1252
                     /region_name="Pat_PNPLA6_PNPLA7"
                     /note="Patatin-like phospholipase domain containing
                     protein 6 and protein 7; cd07225"
                     /db_xref="CDD:132864"
     Site            order(969..970,972,997,1117)
                     /site_type="active"
                     /db_xref="CDD:132864"
     Site            995..999
                     /site_type="other"
                     /note="nucleophile elbow"
                     /db_xref="CDD:132864"
     CDS             1..1347
                     /gene="PNPLA7"
                     /coded_by="XM_061154069.1:189..4232"
                     /db_xref="GeneID:133064246"
ORIGIN      
        1 meqeedtgpe vgfylatlws wglelmeqhs qstmllgivt gvllalalig ttiifvyrrv
       61 sqfrqvqpsp qyrfrkrdkv mfygrkimrk vtmlphtlvg ntaaprqrvr krakvlslak
      121 rilrfkkeyp slqpkeppps lleadltefd vknshlpsev lymlknvrvl ghfekplfle
      181 lckhmvfvql legeyifrpg eldnsiyvvq dgrlevcvqd sdgtevtvke vlagdsvhsl
      241 lsildvitgh aapyktvsar aavpstilrl pamafqgvfe rypetlvrvv qiimvrlqrv
      301 tflalhnylg lttelfnpes qaiplvsvas vtagkakkpm ccsleerper pprpqepcsp
      361 gsarpradll psdrggsrta vcgplpkrsh pillpsvhee vvaelsqaqa giqassapag
      421 atagatsdlr mvcdqarvpp hseerpggsv askprksvvv aetplavlpn sdstldesva
      481 skktdsilra atqdlltlmk lddpslldgr vtlvhvaggt vvlrqgdqdt silfvvsgll
      541 hvyqrkidse edtflfmarp gemvgqlavl tgepliftir anrdcsflsi skahfydimr
      601 rqpavvlsva htvvrrvssf vrqidfaldw meveagraiy rqgdksdcty ivlsgrlrav
      661 iqkddgkkrl ageygrgdlv gvvealtrqa rattvhaird selaklpega lnsikrqypq
      721 vvtrlirllg ekilgslqqg aaaghqfrfh tvgskwdsgn pasnlstvav mpvsedvplt
      781 aftlelkhal saigpalllt sdsikqrlgs aaldsiheyr lsswlgqqed ihrivlyqad
      841 gtltpwtqcc irqadcilvv glgeqeptvg elermletsa vraqkqlvll hrqdgpapar
      901 tvdwlnmrgw csghlhlccp rrvfsrrslp klvelyervc qrppdrhsdf srlarvltgn
      961 aialvlgggg argcaqvgii raltecgipv dmvggtsiga fmgalyseer sysqirirak
     1021 qwaedmmsmv ktmldltypi tsmfsgagfn ssissifkdr qiedlwipyf tittdisasa
     1081 mrvhtdgslw ryvrasmsls gympplcdpk dghllmdggy innlpadvar smgakvviai
     1141 dvgsrdetdl tnygdalsgw wllwkrwnpl atkvkvlnma eiqtrlayvc cvrqlemvks
     1201 sdyceylrpp idsygtlefn kfdeicevgy qhgravfdiw srsgvlektl qdrqgtskmk
     1261 awdvltcpna sftdlaeivs riepakvaag dggdphgpav cpdesdyqte yeevllggpk
     1321 dayvdlqsap adqgsdsede pslrhqh
//
LOCUS       XP_061010053            1347 aa            linear   MAM 02-DEC-2023
DEFINITION  patatin-like phospholipase domain-containing protein 7 isoform X1
            [Dama dama].
ACCESSION   XP_061010053
VERSION     XP_061010053.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154070.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1347
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1347
                     /product="patatin-like phospholipase domain-containing
                     protein 7 isoform X1"
                     /calculated_mol_wt=148736
     Region          28..>59
                     /region_name="TM_EGFR-like"
                     /note="Transmembrane domain of the Epidermal Growth Factor
                     Receptor family of Protein Tyrosine Kinases; cd12087"
                     /db_xref="CDD:213052"
     Site            order(30,33..34,37..38,40..42,44..45,48)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:213052"
     Region          169..290
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(239..240,249..251)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(277..279,283..285)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          495..605
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(565..566,575..577)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(597..599,603..605)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          618..726
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(681..682,691..693)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(713..715,719..721)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          947..1252
                     /region_name="Pat_PNPLA6_PNPLA7"
                     /note="Patatin-like phospholipase domain containing
                     protein 6 and protein 7; cd07225"
                     /db_xref="CDD:132864"
     Site            order(969..970,972,997,1117)
                     /site_type="active"
                     /db_xref="CDD:132864"
     Site            995..999
                     /site_type="other"
                     /note="nucleophile elbow"
                     /db_xref="CDD:132864"
     CDS             1..1347
                     /gene="PNPLA7"
                     /coded_by="XM_061154070.1:125..4168"
                     /db_xref="GeneID:133064246"
ORIGIN      
        1 meqeedtgpe vgfylatlws wglelmeqhs qstmllgivt gvllalalig ttiifvyrrv
       61 sqfrqvqpsp qyrfrkrdkv mfygrkimrk vtmlphtlvg ntaaprqrvr krakvlslak
      121 rilrfkkeyp slqpkeppps lleadltefd vknshlpsev lymlknvrvl ghfekplfle
      181 lckhmvfvql legeyifrpg eldnsiyvvq dgrlevcvqd sdgtevtvke vlagdsvhsl
      241 lsildvitgh aapyktvsar aavpstilrl pamafqgvfe rypetlvrvv qiimvrlqrv
      301 tflalhnylg lttelfnpes qaiplvsvas vtagkakkpm ccsleerper pprpqepcsp
      361 gsarpradll psdrggsrta vcgplpkrsh pillpsvhee vvaelsqaqa giqassapag
      421 atagatsdlr mvcdqarvpp hseerpggsv askprksvvv aetplavlpn sdstldesva
      481 skktdsilra atqdlltlmk lddpslldgr vtlvhvaggt vvlrqgdqdt silfvvsgll
      541 hvyqrkidse edtflfmarp gemvgqlavl tgepliftir anrdcsflsi skahfydimr
      601 rqpavvlsva htvvrrvssf vrqidfaldw meveagraiy rqgdksdcty ivlsgrlrav
      661 iqkddgkkrl ageygrgdlv gvvealtrqa rattvhaird selaklpega lnsikrqypq
      721 vvtrlirllg ekilgslqqg aaaghqfrfh tvgskwdsgn pasnlstvav mpvsedvplt
      781 aftlelkhal saigpalllt sdsikqrlgs aaldsiheyr lsswlgqqed ihrivlyqad
      841 gtltpwtqcc irqadcilvv glgeqeptvg elermletsa vraqkqlvll hrqdgpapar
      901 tvdwlnmrgw csghlhlccp rrvfsrrslp klvelyervc qrppdrhsdf srlarvltgn
      961 aialvlgggg argcaqvgii raltecgipv dmvggtsiga fmgalyseer sysqirirak
     1021 qwaedmmsmv ktmldltypi tsmfsgagfn ssissifkdr qiedlwipyf tittdisasa
     1081 mrvhtdgslw ryvrasmsls gympplcdpk dghllmdggy innlpadvar smgakvviai
     1141 dvgsrdetdl tnygdalsgw wllwkrwnpl atkvkvlnma eiqtrlayvc cvrqlemvks
     1201 sdyceylrpp idsygtlefn kfdeicevgy qhgravfdiw srsgvlektl qdrqgtskmk
     1261 awdvltcpna sftdlaeivs riepakvaag dggdphgpav cpdesdyqte yeevllggpk
     1321 dayvdlqsap adqgsdsede pslrhqh
//
LOCUS       XP_061010054            1347 aa            linear   MAM 02-DEC-2023
DEFINITION  patatin-like phospholipase domain-containing protein 7 isoform X1
            [Dama dama].
ACCESSION   XP_061010054
VERSION     XP_061010054.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154071.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1347
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1347
                     /product="patatin-like phospholipase domain-containing
                     protein 7 isoform X1"
                     /calculated_mol_wt=148736
     Region          28..>59
                     /region_name="TM_EGFR-like"
                     /note="Transmembrane domain of the Epidermal Growth Factor
                     Receptor family of Protein Tyrosine Kinases; cd12087"
                     /db_xref="CDD:213052"
     Site            order(30,33..34,37..38,40..42,44..45,48)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:213052"
     Region          169..290
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(239..240,249..251)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(277..279,283..285)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          495..605
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(565..566,575..577)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(597..599,603..605)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          618..726
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(681..682,691..693)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(713..715,719..721)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          947..1252
                     /region_name="Pat_PNPLA6_PNPLA7"
                     /note="Patatin-like phospholipase domain containing
                     protein 6 and protein 7; cd07225"
                     /db_xref="CDD:132864"
     Site            order(969..970,972,997,1117)
                     /site_type="active"
                     /db_xref="CDD:132864"
     Site            995..999
                     /site_type="other"
                     /note="nucleophile elbow"
                     /db_xref="CDD:132864"
     CDS             1..1347
                     /gene="PNPLA7"
                     /coded_by="XM_061154071.1:22..4065"
                     /db_xref="GeneID:133064246"
ORIGIN      
        1 meqeedtgpe vgfylatlws wglelmeqhs qstmllgivt gvllalalig ttiifvyrrv
       61 sqfrqvqpsp qyrfrkrdkv mfygrkimrk vtmlphtlvg ntaaprqrvr krakvlslak
      121 rilrfkkeyp slqpkeppps lleadltefd vknshlpsev lymlknvrvl ghfekplfle
      181 lckhmvfvql legeyifrpg eldnsiyvvq dgrlevcvqd sdgtevtvke vlagdsvhsl
      241 lsildvitgh aapyktvsar aavpstilrl pamafqgvfe rypetlvrvv qiimvrlqrv
      301 tflalhnylg lttelfnpes qaiplvsvas vtagkakkpm ccsleerper pprpqepcsp
      361 gsarpradll psdrggsrta vcgplpkrsh pillpsvhee vvaelsqaqa giqassapag
      421 atagatsdlr mvcdqarvpp hseerpggsv askprksvvv aetplavlpn sdstldesva
      481 skktdsilra atqdlltlmk lddpslldgr vtlvhvaggt vvlrqgdqdt silfvvsgll
      541 hvyqrkidse edtflfmarp gemvgqlavl tgepliftir anrdcsflsi skahfydimr
      601 rqpavvlsva htvvrrvssf vrqidfaldw meveagraiy rqgdksdcty ivlsgrlrav
      661 iqkddgkkrl ageygrgdlv gvvealtrqa rattvhaird selaklpega lnsikrqypq
      721 vvtrlirllg ekilgslqqg aaaghqfrfh tvgskwdsgn pasnlstvav mpvsedvplt
      781 aftlelkhal saigpalllt sdsikqrlgs aaldsiheyr lsswlgqqed ihrivlyqad
      841 gtltpwtqcc irqadcilvv glgeqeptvg elermletsa vraqkqlvll hrqdgpapar
      901 tvdwlnmrgw csghlhlccp rrvfsrrslp klvelyervc qrppdrhsdf srlarvltgn
      961 aialvlgggg argcaqvgii raltecgipv dmvggtsiga fmgalyseer sysqirirak
     1021 qwaedmmsmv ktmldltypi tsmfsgagfn ssissifkdr qiedlwipyf tittdisasa
     1081 mrvhtdgslw ryvrasmsls gympplcdpk dghllmdggy innlpadvar smgakvviai
     1141 dvgsrdetdl tnygdalsgw wllwkrwnpl atkvkvlnma eiqtrlayvc cvrqlemvks
     1201 sdyceylrpp idsygtlefn kfdeicevgy qhgravfdiw srsgvlektl qdrqgtskmk
     1261 awdvltcpna sftdlaeivs riepakvaag dggdphgpav cpdesdyqte yeevllggpk
     1321 dayvdlqsap adqgsdsede pslrhqh
//
LOCUS       XP_061010055            1322 aa            linear   MAM 02-DEC-2023
DEFINITION  patatin-like phospholipase domain-containing protein 7 isoform X2
            [Dama dama].
ACCESSION   XP_061010055
VERSION     XP_061010055.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154072.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1322
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1322
                     /product="patatin-like phospholipase domain-containing
                     protein 7 isoform X2"
                     /calculated_mol_wt=145853
     Region          3..>34
                     /region_name="TM_EGFR-like"
                     /note="Transmembrane domain of the Epidermal Growth Factor
                     Receptor family of Protein Tyrosine Kinases; cd12087"
                     /db_xref="CDD:213052"
     Site            order(5,8..9,12..13,15..17,19..20,23)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:213052"
     Region          144..265
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(214..215,224..226)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(252..254,258..260)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          470..580
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(540..541,550..552)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(572..574,578..580)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          593..701
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(656..657,666..668)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(688..690,694..696)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          922..1227
                     /region_name="Pat_PNPLA6_PNPLA7"
                     /note="Patatin-like phospholipase domain containing
                     protein 6 and protein 7; cd07225"
                     /db_xref="CDD:132864"
     Site            order(944..945,947,972,1092)
                     /site_type="active"
                     /db_xref="CDD:132864"
     Site            970..974
                     /site_type="other"
                     /note="nucleophile elbow"
                     /db_xref="CDD:132864"
     CDS             1..1322
                     /gene="PNPLA7"
                     /coded_by="XM_061154072.1:1094..5062"
                     /db_xref="GeneID:133064246"
ORIGIN      
        1 meqhsqstml lgivtgvlla laligttiif vyrrvsqfrq vqpspqyrfr krdkvmfygr
       61 kimrkvtmlp htlvgntaap rqrvrkrakv lslakrilrf kkeypslqpk epppsllead
      121 ltefdvknsh lpsevlymlk nvrvlghfek plflelckhm vfvqllegey ifrpgeldns
      181 iyvvqdgrle vcvqdsdgte vtvkevlagd svhsllsild vitghaapyk tvsaraavps
      241 tilrlpamaf qgvferypet lvrvvqiimv rlqrvtflal hnylglttel fnpesqaipl
      301 vsvasvtagk akkpmccsle erperpprpq epcspgsarp radllpsdrg gsrtavcgpl
      361 pkrshpillp svheevvael sqaqagiqas sapagataga tsdlrmvcdq arvpphseer
      421 pggsvaskpr ksvvvaetpl avlpnsdstl desvaskktd silraatqdl ltlmklddps
      481 lldgrvtlvh vaggtvvlrq gdqdtsilfv vsgllhvyqr kidseedtfl fmarpgemvg
      541 qlavltgepl iftiranrdc sflsiskahf ydimrrqpav vlsvahtvvr rvssfvrqid
      601 faldwmevea graiyrqgdk sdctyivlsg rlraviqkdd gkkrlageyg rgdlvgvvea
      661 ltrqarattv hairdselak lpegalnsik rqypqvvtrl irllgekilg slqqgaaagh
      721 qfrfhtvgsk wdsgnpasnl stvavmpvse dvpltaftle lkhalsaigp allltsdsik
      781 qrlgsaalds iheyrlsswl gqqedihriv lyqadgtltp wtqccirqad cilvvglgeq
      841 eptvgelerm letsavraqk qlvllhrqdg papartvdwl nmrgwcsghl hlccprrvfs
      901 rrslpklvel yervcqrppd rhsdfsrlar vltgnaialv lggggargca qvgiiralte
      961 cgipvdmvgg tsigafmgal yseersysqi rirakqwaed mmsmvktmld ltypitsmfs
     1021 gagfnssiss ifkdrqiedl wipyftittd isasamrvht dgslwryvra smslsgympp
     1081 lcdpkdghll mdggyinnlp advarsmgak vviaidvgsr detdltnygd alsgwwllwk
     1141 rwnplatkvk vlnmaeiqtr layvccvrql emvkssdyce ylrppidsyg tlefnkfdei
     1201 cevgyqhgra vfdiwsrsgv lektlqdrqg tskmkawdvl tcpnasftdl aeivsriepa
     1261 kvaagdggdp hgpavcpdes dyqteyeevl lggpkdayvd lqsapadqgs dsedepslrh
     1321 qh
//
LOCUS       XP_061010056            1322 aa            linear   MAM 02-DEC-2023
DEFINITION  patatin-like phospholipase domain-containing protein 7 isoform X2
            [Dama dama].
ACCESSION   XP_061010056
VERSION     XP_061010056.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154073.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1322
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1322
                     /product="patatin-like phospholipase domain-containing
                     protein 7 isoform X2"
                     /calculated_mol_wt=145853
     Region          3..>34
                     /region_name="TM_EGFR-like"
                     /note="Transmembrane domain of the Epidermal Growth Factor
                     Receptor family of Protein Tyrosine Kinases; cd12087"
                     /db_xref="CDD:213052"
     Site            order(5,8..9,12..13,15..17,19..20,23)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:213052"
     Region          144..265
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(214..215,224..226)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(252..254,258..260)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          470..580
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(540..541,550..552)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(572..574,578..580)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          593..701
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(656..657,666..668)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(688..690,694..696)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          922..1227
                     /region_name="Pat_PNPLA6_PNPLA7"
                     /note="Patatin-like phospholipase domain containing
                     protein 6 and protein 7; cd07225"
                     /db_xref="CDD:132864"
     Site            order(944..945,947,972,1092)
                     /site_type="active"
                     /db_xref="CDD:132864"
     Site            970..974
                     /site_type="other"
                     /note="nucleophile elbow"
                     /db_xref="CDD:132864"
     CDS             1..1322
                     /gene="PNPLA7"
                     /coded_by="XM_061154073.1:1649..5617"
                     /db_xref="GeneID:133064246"
ORIGIN      
        1 meqhsqstml lgivtgvlla laligttiif vyrrvsqfrq vqpspqyrfr krdkvmfygr
       61 kimrkvtmlp htlvgntaap rqrvrkrakv lslakrilrf kkeypslqpk epppsllead
      121 ltefdvknsh lpsevlymlk nvrvlghfek plflelckhm vfvqllegey ifrpgeldns
      181 iyvvqdgrle vcvqdsdgte vtvkevlagd svhsllsild vitghaapyk tvsaraavps
      241 tilrlpamaf qgvferypet lvrvvqiimv rlqrvtflal hnylglttel fnpesqaipl
      301 vsvasvtagk akkpmccsle erperpprpq epcspgsarp radllpsdrg gsrtavcgpl
      361 pkrshpillp svheevvael sqaqagiqas sapagataga tsdlrmvcdq arvpphseer
      421 pggsvaskpr ksvvvaetpl avlpnsdstl desvaskktd silraatqdl ltlmklddps
      481 lldgrvtlvh vaggtvvlrq gdqdtsilfv vsgllhvyqr kidseedtfl fmarpgemvg
      541 qlavltgepl iftiranrdc sflsiskahf ydimrrqpav vlsvahtvvr rvssfvrqid
      601 faldwmevea graiyrqgdk sdctyivlsg rlraviqkdd gkkrlageyg rgdlvgvvea
      661 ltrqarattv hairdselak lpegalnsik rqypqvvtrl irllgekilg slqqgaaagh
      721 qfrfhtvgsk wdsgnpasnl stvavmpvse dvpltaftle lkhalsaigp allltsdsik
      781 qrlgsaalds iheyrlsswl gqqedihriv lyqadgtltp wtqccirqad cilvvglgeq
      841 eptvgelerm letsavraqk qlvllhrqdg papartvdwl nmrgwcsghl hlccprrvfs
      901 rrslpklvel yervcqrppd rhsdfsrlar vltgnaialv lggggargca qvgiiralte
      961 cgipvdmvgg tsigafmgal yseersysqi rirakqwaed mmsmvktmld ltypitsmfs
     1021 gagfnssiss ifkdrqiedl wipyftittd isasamrvht dgslwryvra smslsgympp
     1081 lcdpkdghll mdggyinnlp advarsmgak vviaidvgsr detdltnygd alsgwwllwk
     1141 rwnplatkvk vlnmaeiqtr layvccvrql emvkssdyce ylrppidsyg tlefnkfdei
     1201 cevgyqhgra vfdiwsrsgv lektlqdrqg tskmkawdvl tcpnasftdl aeivsriepa
     1261 kvaagdggdp hgpavcpdes dyqteyeevl lggpkdayvd lqsapadqgs dsedepslrh
     1321 qh
//
LOCUS       XP_061010057            1322 aa            linear   MAM 02-DEC-2023
DEFINITION  patatin-like phospholipase domain-containing protein 7 isoform X2
            [Dama dama].
ACCESSION   XP_061010057
VERSION     XP_061010057.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154074.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1322
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1322
                     /product="patatin-like phospholipase domain-containing
                     protein 7 isoform X2"
                     /calculated_mol_wt=145853
     Region          3..>34
                     /region_name="TM_EGFR-like"
                     /note="Transmembrane domain of the Epidermal Growth Factor
                     Receptor family of Protein Tyrosine Kinases; cd12087"
                     /db_xref="CDD:213052"
     Site            order(5,8..9,12..13,15..17,19..20,23)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:213052"
     Region          144..265
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(214..215,224..226)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(252..254,258..260)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          470..580
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(540..541,550..552)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(572..574,578..580)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          593..701
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(656..657,666..668)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(688..690,694..696)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          922..1227
                     /region_name="Pat_PNPLA6_PNPLA7"
                     /note="Patatin-like phospholipase domain containing
                     protein 6 and protein 7; cd07225"
                     /db_xref="CDD:132864"
     Site            order(944..945,947,972,1092)
                     /site_type="active"
                     /db_xref="CDD:132864"
     Site            970..974
                     /site_type="other"
                     /note="nucleophile elbow"
                     /db_xref="CDD:132864"
     CDS             1..1322
                     /gene="PNPLA7"
                     /coded_by="XM_061154074.1:2077..6045"
                     /db_xref="GeneID:133064246"
ORIGIN      
        1 meqhsqstml lgivtgvlla laligttiif vyrrvsqfrq vqpspqyrfr krdkvmfygr
       61 kimrkvtmlp htlvgntaap rqrvrkrakv lslakrilrf kkeypslqpk epppsllead
      121 ltefdvknsh lpsevlymlk nvrvlghfek plflelckhm vfvqllegey ifrpgeldns
      181 iyvvqdgrle vcvqdsdgte vtvkevlagd svhsllsild vitghaapyk tvsaraavps
      241 tilrlpamaf qgvferypet lvrvvqiimv rlqrvtflal hnylglttel fnpesqaipl
      301 vsvasvtagk akkpmccsle erperpprpq epcspgsarp radllpsdrg gsrtavcgpl
      361 pkrshpillp svheevvael sqaqagiqas sapagataga tsdlrmvcdq arvpphseer
      421 pggsvaskpr ksvvvaetpl avlpnsdstl desvaskktd silraatqdl ltlmklddps
      481 lldgrvtlvh vaggtvvlrq gdqdtsilfv vsgllhvyqr kidseedtfl fmarpgemvg
      541 qlavltgepl iftiranrdc sflsiskahf ydimrrqpav vlsvahtvvr rvssfvrqid
      601 faldwmevea graiyrqgdk sdctyivlsg rlraviqkdd gkkrlageyg rgdlvgvvea
      661 ltrqarattv hairdselak lpegalnsik rqypqvvtrl irllgekilg slqqgaaagh
      721 qfrfhtvgsk wdsgnpasnl stvavmpvse dvpltaftle lkhalsaigp allltsdsik
      781 qrlgsaalds iheyrlsswl gqqedihriv lyqadgtltp wtqccirqad cilvvglgeq
      841 eptvgelerm letsavraqk qlvllhrqdg papartvdwl nmrgwcsghl hlccprrvfs
      901 rrslpklvel yervcqrppd rhsdfsrlar vltgnaialv lggggargca qvgiiralte
      961 cgipvdmvgg tsigafmgal yseersysqi rirakqwaed mmsmvktmld ltypitsmfs
     1021 gagfnssiss ifkdrqiedl wipyftittd isasamrvht dgslwryvra smslsgympp
     1081 lcdpkdghll mdggyinnlp advarsmgak vviaidvgsr detdltnygd alsgwwllwk
     1141 rwnplatkvk vlnmaeiqtr layvccvrql emvkssdyce ylrppidsyg tlefnkfdei
     1201 cevgyqhgra vfdiwsrsgv lektlqdrqg tskmkawdvl tcpnasftdl aeivsriepa
     1261 kvaagdggdp hgpavcpdes dyqteyeevl lggpkdayvd lqsapadqgs dsedepslrh
     1321 qh
//
LOCUS       XP_061010058            1322 aa            linear   MAM 02-DEC-2023
DEFINITION  patatin-like phospholipase domain-containing protein 7 isoform X2
            [Dama dama].
ACCESSION   XP_061010058
VERSION     XP_061010058.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154075.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1322
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1322
                     /product="patatin-like phospholipase domain-containing
                     protein 7 isoform X2"
                     /calculated_mol_wt=145853
     Region          3..>34
                     /region_name="TM_EGFR-like"
                     /note="Transmembrane domain of the Epidermal Growth Factor
                     Receptor family of Protein Tyrosine Kinases; cd12087"
                     /db_xref="CDD:213052"
     Site            order(5,8..9,12..13,15..17,19..20,23)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:213052"
     Region          144..265
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(214..215,224..226)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(252..254,258..260)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          470..580
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(540..541,550..552)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(572..574,578..580)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          593..701
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(656..657,666..668)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(688..690,694..696)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          922..1227
                     /region_name="Pat_PNPLA6_PNPLA7"
                     /note="Patatin-like phospholipase domain containing
                     protein 6 and protein 7; cd07225"
                     /db_xref="CDD:132864"
     Site            order(944..945,947,972,1092)
                     /site_type="active"
                     /db_xref="CDD:132864"
     Site            970..974
                     /site_type="other"
                     /note="nucleophile elbow"
                     /db_xref="CDD:132864"
     CDS             1..1322
                     /gene="PNPLA7"
                     /coded_by="XM_061154075.1:2026..5994"
                     /db_xref="GeneID:133064246"
ORIGIN      
        1 meqhsqstml lgivtgvlla laligttiif vyrrvsqfrq vqpspqyrfr krdkvmfygr
       61 kimrkvtmlp htlvgntaap rqrvrkrakv lslakrilrf kkeypslqpk epppsllead
      121 ltefdvknsh lpsevlymlk nvrvlghfek plflelckhm vfvqllegey ifrpgeldns
      181 iyvvqdgrle vcvqdsdgte vtvkevlagd svhsllsild vitghaapyk tvsaraavps
      241 tilrlpamaf qgvferypet lvrvvqiimv rlqrvtflal hnylglttel fnpesqaipl
      301 vsvasvtagk akkpmccsle erperpprpq epcspgsarp radllpsdrg gsrtavcgpl
      361 pkrshpillp svheevvael sqaqagiqas sapagataga tsdlrmvcdq arvpphseer
      421 pggsvaskpr ksvvvaetpl avlpnsdstl desvaskktd silraatqdl ltlmklddps
      481 lldgrvtlvh vaggtvvlrq gdqdtsilfv vsgllhvyqr kidseedtfl fmarpgemvg
      541 qlavltgepl iftiranrdc sflsiskahf ydimrrqpav vlsvahtvvr rvssfvrqid
      601 faldwmevea graiyrqgdk sdctyivlsg rlraviqkdd gkkrlageyg rgdlvgvvea
      661 ltrqarattv hairdselak lpegalnsik rqypqvvtrl irllgekilg slqqgaaagh
      721 qfrfhtvgsk wdsgnpasnl stvavmpvse dvpltaftle lkhalsaigp allltsdsik
      781 qrlgsaalds iheyrlsswl gqqedihriv lyqadgtltp wtqccirqad cilvvglgeq
      841 eptvgelerm letsavraqk qlvllhrqdg papartvdwl nmrgwcsghl hlccprrvfs
      901 rrslpklvel yervcqrppd rhsdfsrlar vltgnaialv lggggargca qvgiiralte
      961 cgipvdmvgg tsigafmgal yseersysqi rirakqwaed mmsmvktmld ltypitsmfs
     1021 gagfnssiss ifkdrqiedl wipyftittd isasamrvht dgslwryvra smslsgympp
     1081 lcdpkdghll mdggyinnlp advarsmgak vviaidvgsr detdltnygd alsgwwllwk
     1141 rwnplatkvk vlnmaeiqtr layvccvrql emvkssdyce ylrppidsyg tlefnkfdei
     1201 cevgyqhgra vfdiwsrsgv lektlqdrqg tskmkawdvl tcpnasftdl aeivsriepa
     1261 kvaagdggdp hgpavcpdes dyqteyeevl lggpkdayvd lqsapadqgs dsedepslrh
     1321 qh
//
LOCUS       XP_061010060            1322 aa            linear   MAM 02-DEC-2023
DEFINITION  patatin-like phospholipase domain-containing protein 7 isoform X2
            [Dama dama].
ACCESSION   XP_061010060
VERSION     XP_061010060.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154077.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1322
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1322
                     /product="patatin-like phospholipase domain-containing
                     protein 7 isoform X2"
                     /calculated_mol_wt=145853
     Region          3..>34
                     /region_name="TM_EGFR-like"
                     /note="Transmembrane domain of the Epidermal Growth Factor
                     Receptor family of Protein Tyrosine Kinases; cd12087"
                     /db_xref="CDD:213052"
     Site            order(5,8..9,12..13,15..17,19..20,23)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:213052"
     Region          144..265
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(214..215,224..226)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(252..254,258..260)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          470..580
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(540..541,550..552)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(572..574,578..580)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          593..701
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(656..657,666..668)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(688..690,694..696)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          922..1227
                     /region_name="Pat_PNPLA6_PNPLA7"
                     /note="Patatin-like phospholipase domain containing
                     protein 6 and protein 7; cd07225"
                     /db_xref="CDD:132864"
     Site            order(944..945,947,972,1092)
                     /site_type="active"
                     /db_xref="CDD:132864"
     Site            970..974
                     /site_type="other"
                     /note="nucleophile elbow"
                     /db_xref="CDD:132864"
     CDS             1..1322
                     /gene="PNPLA7"
                     /coded_by="XM_061154077.1:1907..5875"
                     /db_xref="GeneID:133064246"
ORIGIN      
        1 meqhsqstml lgivtgvlla laligttiif vyrrvsqfrq vqpspqyrfr krdkvmfygr
       61 kimrkvtmlp htlvgntaap rqrvrkrakv lslakrilrf kkeypslqpk epppsllead
      121 ltefdvknsh lpsevlymlk nvrvlghfek plflelckhm vfvqllegey ifrpgeldns
      181 iyvvqdgrle vcvqdsdgte vtvkevlagd svhsllsild vitghaapyk tvsaraavps
      241 tilrlpamaf qgvferypet lvrvvqiimv rlqrvtflal hnylglttel fnpesqaipl
      301 vsvasvtagk akkpmccsle erperpprpq epcspgsarp radllpsdrg gsrtavcgpl
      361 pkrshpillp svheevvael sqaqagiqas sapagataga tsdlrmvcdq arvpphseer
      421 pggsvaskpr ksvvvaetpl avlpnsdstl desvaskktd silraatqdl ltlmklddps
      481 lldgrvtlvh vaggtvvlrq gdqdtsilfv vsgllhvyqr kidseedtfl fmarpgemvg
      541 qlavltgepl iftiranrdc sflsiskahf ydimrrqpav vlsvahtvvr rvssfvrqid
      601 faldwmevea graiyrqgdk sdctyivlsg rlraviqkdd gkkrlageyg rgdlvgvvea
      661 ltrqarattv hairdselak lpegalnsik rqypqvvtrl irllgekilg slqqgaaagh
      721 qfrfhtvgsk wdsgnpasnl stvavmpvse dvpltaftle lkhalsaigp allltsdsik
      781 qrlgsaalds iheyrlsswl gqqedihriv lyqadgtltp wtqccirqad cilvvglgeq
      841 eptvgelerm letsavraqk qlvllhrqdg papartvdwl nmrgwcsghl hlccprrvfs
      901 rrslpklvel yervcqrppd rhsdfsrlar vltgnaialv lggggargca qvgiiralte
      961 cgipvdmvgg tsigafmgal yseersysqi rirakqwaed mmsmvktmld ltypitsmfs
     1021 gagfnssiss ifkdrqiedl wipyftittd isasamrvht dgslwryvra smslsgympp
     1081 lcdpkdghll mdggyinnlp advarsmgak vviaidvgsr detdltnygd alsgwwllwk
     1141 rwnplatkvk vlnmaeiqtr layvccvrql emvkssdyce ylrppidsyg tlefnkfdei
     1201 cevgyqhgra vfdiwsrsgv lektlqdrqg tskmkawdvl tcpnasftdl aeivsriepa
     1261 kvaagdggdp hgpavcpdes dyqteyeevl lggpkdayvd lqsapadqgs dsedepslrh
     1321 qh
//
LOCUS       XP_061010061            1322 aa            linear   MAM 02-DEC-2023
DEFINITION  patatin-like phospholipase domain-containing protein 7 isoform X2
            [Dama dama].
ACCESSION   XP_061010061
VERSION     XP_061010061.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154078.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1322
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1322
                     /product="patatin-like phospholipase domain-containing
                     protein 7 isoform X2"
                     /calculated_mol_wt=145853
     Region          3..>34
                     /region_name="TM_EGFR-like"
                     /note="Transmembrane domain of the Epidermal Growth Factor
                     Receptor family of Protein Tyrosine Kinases; cd12087"
                     /db_xref="CDD:213052"
     Site            order(5,8..9,12..13,15..17,19..20,23)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:213052"
     Region          144..265
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(214..215,224..226)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(252..254,258..260)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          470..580
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(540..541,550..552)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(572..574,578..580)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          593..701
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(656..657,666..668)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(688..690,694..696)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          922..1227
                     /region_name="Pat_PNPLA6_PNPLA7"
                     /note="Patatin-like phospholipase domain containing
                     protein 6 and protein 7; cd07225"
                     /db_xref="CDD:132864"
     Site            order(944..945,947,972,1092)
                     /site_type="active"
                     /db_xref="CDD:132864"
     Site            970..974
                     /site_type="other"
                     /note="nucleophile elbow"
                     /db_xref="CDD:132864"
     CDS             1..1322
                     /gene="PNPLA7"
                     /coded_by="XM_061154078.1:1915..5883"
                     /db_xref="GeneID:133064246"
ORIGIN      
        1 meqhsqstml lgivtgvlla laligttiif vyrrvsqfrq vqpspqyrfr krdkvmfygr
       61 kimrkvtmlp htlvgntaap rqrvrkrakv lslakrilrf kkeypslqpk epppsllead
      121 ltefdvknsh lpsevlymlk nvrvlghfek plflelckhm vfvqllegey ifrpgeldns
      181 iyvvqdgrle vcvqdsdgte vtvkevlagd svhsllsild vitghaapyk tvsaraavps
      241 tilrlpamaf qgvferypet lvrvvqiimv rlqrvtflal hnylglttel fnpesqaipl
      301 vsvasvtagk akkpmccsle erperpprpq epcspgsarp radllpsdrg gsrtavcgpl
      361 pkrshpillp svheevvael sqaqagiqas sapagataga tsdlrmvcdq arvpphseer
      421 pggsvaskpr ksvvvaetpl avlpnsdstl desvaskktd silraatqdl ltlmklddps
      481 lldgrvtlvh vaggtvvlrq gdqdtsilfv vsgllhvyqr kidseedtfl fmarpgemvg
      541 qlavltgepl iftiranrdc sflsiskahf ydimrrqpav vlsvahtvvr rvssfvrqid
      601 faldwmevea graiyrqgdk sdctyivlsg rlraviqkdd gkkrlageyg rgdlvgvvea
      661 ltrqarattv hairdselak lpegalnsik rqypqvvtrl irllgekilg slqqgaaagh
      721 qfrfhtvgsk wdsgnpasnl stvavmpvse dvpltaftle lkhalsaigp allltsdsik
      781 qrlgsaalds iheyrlsswl gqqedihriv lyqadgtltp wtqccirqad cilvvglgeq
      841 eptvgelerm letsavraqk qlvllhrqdg papartvdwl nmrgwcsghl hlccprrvfs
      901 rrslpklvel yervcqrppd rhsdfsrlar vltgnaialv lggggargca qvgiiralte
      961 cgipvdmvgg tsigafmgal yseersysqi rirakqwaed mmsmvktmld ltypitsmfs
     1021 gagfnssiss ifkdrqiedl wipyftittd isasamrvht dgslwryvra smslsgympp
     1081 lcdpkdghll mdggyinnlp advarsmgak vviaidvgsr detdltnygd alsgwwllwk
     1141 rwnplatkvk vlnmaeiqtr layvccvrql emvkssdyce ylrppidsyg tlefnkfdei
     1201 cevgyqhgra vfdiwsrsgv lektlqdrqg tskmkawdvl tcpnasftdl aeivsriepa
     1261 kvaagdggdp hgpavcpdes dyqteyeevl lggpkdayvd lqsapadqgs dsedepslrh
     1321 qh
//
LOCUS       XP_061010062            1322 aa            linear   MAM 02-DEC-2023
DEFINITION  patatin-like phospholipase domain-containing protein 7 isoform X2
            [Dama dama].
ACCESSION   XP_061010062
VERSION     XP_061010062.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154079.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1322
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1322
                     /product="patatin-like phospholipase domain-containing
                     protein 7 isoform X2"
                     /calculated_mol_wt=145853
     Region          3..>34
                     /region_name="TM_EGFR-like"
                     /note="Transmembrane domain of the Epidermal Growth Factor
                     Receptor family of Protein Tyrosine Kinases; cd12087"
                     /db_xref="CDD:213052"
     Site            order(5,8..9,12..13,15..17,19..20,23)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:213052"
     Region          144..265
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(214..215,224..226)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(252..254,258..260)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          470..580
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(540..541,550..552)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(572..574,578..580)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          593..701
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(656..657,666..668)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(688..690,694..696)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          922..1227
                     /region_name="Pat_PNPLA6_PNPLA7"
                     /note="Patatin-like phospholipase domain containing
                     protein 6 and protein 7; cd07225"
                     /db_xref="CDD:132864"
     Site            order(944..945,947,972,1092)
                     /site_type="active"
                     /db_xref="CDD:132864"
     Site            970..974
                     /site_type="other"
                     /note="nucleophile elbow"
                     /db_xref="CDD:132864"
     CDS             1..1322
                     /gene="PNPLA7"
                     /coded_by="XM_061154079.1:739..4707"
                     /db_xref="GeneID:133064246"
ORIGIN      
        1 meqhsqstml lgivtgvlla laligttiif vyrrvsqfrq vqpspqyrfr krdkvmfygr
       61 kimrkvtmlp htlvgntaap rqrvrkrakv lslakrilrf kkeypslqpk epppsllead
      121 ltefdvknsh lpsevlymlk nvrvlghfek plflelckhm vfvqllegey ifrpgeldns
      181 iyvvqdgrle vcvqdsdgte vtvkevlagd svhsllsild vitghaapyk tvsaraavps
      241 tilrlpamaf qgvferypet lvrvvqiimv rlqrvtflal hnylglttel fnpesqaipl
      301 vsvasvtagk akkpmccsle erperpprpq epcspgsarp radllpsdrg gsrtavcgpl
      361 pkrshpillp svheevvael sqaqagiqas sapagataga tsdlrmvcdq arvpphseer
      421 pggsvaskpr ksvvvaetpl avlpnsdstl desvaskktd silraatqdl ltlmklddps
      481 lldgrvtlvh vaggtvvlrq gdqdtsilfv vsgllhvyqr kidseedtfl fmarpgemvg
      541 qlavltgepl iftiranrdc sflsiskahf ydimrrqpav vlsvahtvvr rvssfvrqid
      601 faldwmevea graiyrqgdk sdctyivlsg rlraviqkdd gkkrlageyg rgdlvgvvea
      661 ltrqarattv hairdselak lpegalnsik rqypqvvtrl irllgekilg slqqgaaagh
      721 qfrfhtvgsk wdsgnpasnl stvavmpvse dvpltaftle lkhalsaigp allltsdsik
      781 qrlgsaalds iheyrlsswl gqqedihriv lyqadgtltp wtqccirqad cilvvglgeq
      841 eptvgelerm letsavraqk qlvllhrqdg papartvdwl nmrgwcsghl hlccprrvfs
      901 rrslpklvel yervcqrppd rhsdfsrlar vltgnaialv lggggargca qvgiiralte
      961 cgipvdmvgg tsigafmgal yseersysqi rirakqwaed mmsmvktmld ltypitsmfs
     1021 gagfnssiss ifkdrqiedl wipyftittd isasamrvht dgslwryvra smslsgympp
     1081 lcdpkdghll mdggyinnlp advarsmgak vviaidvgsr detdltnygd alsgwwllwk
     1141 rwnplatkvk vlnmaeiqtr layvccvrql emvkssdyce ylrppidsyg tlefnkfdei
     1201 cevgyqhgra vfdiwsrsgv lektlqdrqg tskmkawdvl tcpnasftdl aeivsriepa
     1261 kvaagdggdp hgpavcpdes dyqteyeevl lggpkdayvd lqsapadqgs dsedepslrh
     1321 qh
//
LOCUS       XP_061010063            1322 aa            linear   MAM 02-DEC-2023
DEFINITION  patatin-like phospholipase domain-containing protein 7 isoform X2
            [Dama dama].
ACCESSION   XP_061010063
VERSION     XP_061010063.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154080.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1322
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1322
                     /product="patatin-like phospholipase domain-containing
                     protein 7 isoform X2"
                     /calculated_mol_wt=145853
     Region          3..>34
                     /region_name="TM_EGFR-like"
                     /note="Transmembrane domain of the Epidermal Growth Factor
                     Receptor family of Protein Tyrosine Kinases; cd12087"
                     /db_xref="CDD:213052"
     Site            order(5,8..9,12..13,15..17,19..20,23)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:213052"
     Region          144..265
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(214..215,224..226)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(252..254,258..260)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          470..580
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(540..541,550..552)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(572..574,578..580)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          593..701
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(656..657,666..668)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(688..690,694..696)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          922..1227
                     /region_name="Pat_PNPLA6_PNPLA7"
                     /note="Patatin-like phospholipase domain containing
                     protein 6 and protein 7; cd07225"
                     /db_xref="CDD:132864"
     Site            order(944..945,947,972,1092)
                     /site_type="active"
                     /db_xref="CDD:132864"
     Site            970..974
                     /site_type="other"
                     /note="nucleophile elbow"
                     /db_xref="CDD:132864"
     CDS             1..1322
                     /gene="PNPLA7"
                     /coded_by="XM_061154080.1:128..4096"
                     /db_xref="GeneID:133064246"
ORIGIN      
        1 meqhsqstml lgivtgvlla laligttiif vyrrvsqfrq vqpspqyrfr krdkvmfygr
       61 kimrkvtmlp htlvgntaap rqrvrkrakv lslakrilrf kkeypslqpk epppsllead
      121 ltefdvknsh lpsevlymlk nvrvlghfek plflelckhm vfvqllegey ifrpgeldns
      181 iyvvqdgrle vcvqdsdgte vtvkevlagd svhsllsild vitghaapyk tvsaraavps
      241 tilrlpamaf qgvferypet lvrvvqiimv rlqrvtflal hnylglttel fnpesqaipl
      301 vsvasvtagk akkpmccsle erperpprpq epcspgsarp radllpsdrg gsrtavcgpl
      361 pkrshpillp svheevvael sqaqagiqas sapagataga tsdlrmvcdq arvpphseer
      421 pggsvaskpr ksvvvaetpl avlpnsdstl desvaskktd silraatqdl ltlmklddps
      481 lldgrvtlvh vaggtvvlrq gdqdtsilfv vsgllhvyqr kidseedtfl fmarpgemvg
      541 qlavltgepl iftiranrdc sflsiskahf ydimrrqpav vlsvahtvvr rvssfvrqid
      601 faldwmevea graiyrqgdk sdctyivlsg rlraviqkdd gkkrlageyg rgdlvgvvea
      661 ltrqarattv hairdselak lpegalnsik rqypqvvtrl irllgekilg slqqgaaagh
      721 qfrfhtvgsk wdsgnpasnl stvavmpvse dvpltaftle lkhalsaigp allltsdsik
      781 qrlgsaalds iheyrlsswl gqqedihriv lyqadgtltp wtqccirqad cilvvglgeq
      841 eptvgelerm letsavraqk qlvllhrqdg papartvdwl nmrgwcsghl hlccprrvfs
      901 rrslpklvel yervcqrppd rhsdfsrlar vltgnaialv lggggargca qvgiiralte
      961 cgipvdmvgg tsigafmgal yseersysqi rirakqwaed mmsmvktmld ltypitsmfs
     1021 gagfnssiss ifkdrqiedl wipyftittd isasamrvht dgslwryvra smslsgympp
     1081 lcdpkdghll mdggyinnlp advarsmgak vviaidvgsr detdltnygd alsgwwllwk
     1141 rwnplatkvk vlnmaeiqtr layvccvrql emvkssdyce ylrppidsyg tlefnkfdei
     1201 cevgyqhgra vfdiwsrsgv lektlqdrqg tskmkawdvl tcpnasftdl aeivsriepa
     1261 kvaagdggdp hgpavcpdes dyqteyeevl lggpkdayvd lqsapadqgs dsedepslrh
     1321 qh
//
LOCUS       XP_061010064            1267 aa            linear   MAM 02-DEC-2023
DEFINITION  patatin-like phospholipase domain-containing protein 7 isoform X3
            [Dama dama].
ACCESSION   XP_061010064
VERSION     XP_061010064.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154081.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1267
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1267
                     /product="patatin-like phospholipase domain-containing
                     protein 7 isoform X3"
                     /calculated_mol_wt=139492
     Region          89..210
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(159..160,169..171)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(197..199,203..205)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          415..525
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(485..486,495..497)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(517..519,523..525)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          538..646
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(601..602,611..613)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(633..635,639..641)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          867..1172
                     /region_name="Pat_PNPLA6_PNPLA7"
                     /note="Patatin-like phospholipase domain containing
                     protein 6 and protein 7; cd07225"
                     /db_xref="CDD:132864"
     Site            order(889..890,892,917,1037)
                     /site_type="active"
                     /db_xref="CDD:132864"
     Site            915..919
                     /site_type="other"
                     /note="nucleophile elbow"
                     /db_xref="CDD:132864"
     CDS             1..1267
                     /gene="PNPLA7"
                     /coded_by="XM_061154081.1:241..4044"
                     /db_xref="GeneID:133064246"
ORIGIN      
        1 mfygrkimrk vtmlphtlvg ntaaprqrvr krakvlslak rilrfkkeyp slqpkeppps
       61 lleadltefd vknshlpsev lymlknvrvl ghfekplfle lckhmvfvql legeyifrpg
      121 eldnsiyvvq dgrlevcvqd sdgtevtvke vlagdsvhsl lsildvitgh aapyktvsar
      181 aavpstilrl pamafqgvfe rypetlvrvv qiimvrlqrv tflalhnylg lttelfnpes
      241 qaiplvsvas vtagkakkpm ccsleerper pprpqepcsp gsarpradll psdrggsrta
      301 vcgplpkrsh pillpsvhee vvaelsqaqa giqassapag atagatsdlr mvcdqarvpp
      361 hseerpggsv askprksvvv aetplavlpn sdstldesva skktdsilra atqdlltlmk
      421 lddpslldgr vtlvhvaggt vvlrqgdqdt silfvvsgll hvyqrkidse edtflfmarp
      481 gemvgqlavl tgepliftir anrdcsflsi skahfydimr rqpavvlsva htvvrrvssf
      541 vrqidfaldw meveagraiy rqgdksdcty ivlsgrlrav iqkddgkkrl ageygrgdlv
      601 gvvealtrqa rattvhaird selaklpega lnsikrqypq vvtrlirllg ekilgslqqg
      661 aaaghqfrfh tvgskwdsgn pasnlstvav mpvsedvplt aftlelkhal saigpalllt
      721 sdsikqrlgs aaldsiheyr lsswlgqqed ihrivlyqad gtltpwtqcc irqadcilvv
      781 glgeqeptvg elermletsa vraqkqlvll hrqdgpapar tvdwlnmrgw csghlhlccp
      841 rrvfsrrslp klvelyervc qrppdrhsdf srlarvltgn aialvlgggg argcaqvgii
      901 raltecgipv dmvggtsiga fmgalyseer sysqirirak qwaedmmsmv ktmldltypi
      961 tsmfsgagfn ssissifkdr qiedlwipyf tittdisasa mrvhtdgslw ryvrasmsls
     1021 gympplcdpk dghllmdggy innlpadvar smgakvviai dvgsrdetdl tnygdalsgw
     1081 wllwkrwnpl atkvkvlnma eiqtrlayvc cvrqlemvks sdyceylrpp idsygtlefn
     1141 kfdeicevgy qhgravfdiw srsgvlektl qdrqgtskmk awdvltcpna sftdlaeivs
     1201 riepakvaag dggdphgpav cpdesdyqte yeevllggpk dayvdlqsap adqgsdsede
     1261 pslrhqh
//
LOCUS       XP_061010065             563 aa            linear   MAM 02-DEC-2023
DEFINITION  NMDA receptor synaptonuclear signaling and neuronal migration
            factor isoform X1 [Dama dama].
ACCESSION   XP_061010065
VERSION     XP_061010065.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154082.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..563
                     /product="NMDA receptor synaptonuclear signaling and
                     neuronal migration factor isoform X1"
                     /calculated_mol_wt=63431
     CDS             1..563
                     /gene="NSMF"
                     /coded_by="XM_061154082.1:153..1844"
                     /db_xref="GeneID:133064247"
ORIGIN      
        1 mrrrldhgrr rlpeegakkr ghvlgggqsa vrprcagrqg prncdlpalg glraarafge
       61 ylsqshpenr ngadhllada ysghdgspem qpapqnkrrl slisngryeg slpeeaasgk
      121 pagegpqprv ytisgepall pgpeaeaiel avvkgrrqge rhphhhsqpl raspggshed
      181 vsrpcqswag srqgskecpg caqlapspsp qafgvdqppl peapgrrkkl ermysvdrvs
      241 ddvpirtwfp kenlfsfqta tttmqavfrg yaerkrrkre ndsasviqrn frkhlrmvgs
      301 rrvkaqskaq tfaerrersf srswsdptpm kadtshdsrd ssdlqsshct lgeafedldw
      361 etekgleava cdtegfvppk vmlisskvpk aeyiptiirr ddpaiipily dhehatfedi
      421 leeiekklni yhkgakiwkm lifcqggpgh lyllknkvat fakvekeedm ihfwkrlsrl
      481 mskvnpepnv ihvmgcyvlg npngeklfqn lrtlmtpyrv ifesplelsa qgkqmietyf
      541 dfrlyrlwks rqhsklldfe dvl
//
LOCUS       XP_061010066             559 aa            linear   MAM 02-DEC-2023
DEFINITION  NMDA receptor synaptonuclear signaling and neuronal migration
            factor isoform X2 [Dama dama].
ACCESSION   XP_061010066
VERSION     XP_061010066.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154083.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..559
                     /product="NMDA receptor synaptonuclear signaling and
                     neuronal migration factor isoform X2"
                     /calculated_mol_wt=63017
     CDS             1..559
                     /gene="NSMF"
                     /coded_by="XM_061154083.1:153..1832"
                     /db_xref="GeneID:133064247"
ORIGIN      
        1 mrrrldhgrr rlpeegakkr ghvlgggqsa vrprcagrqg prncdlpalg glraarafge
       61 ylsqshpenr ngadhllada ysghdgspem qpapqnkrrl slisngryeg slpeeaasgk
      121 pagegpqprv ytisgepall pgpeaeaiel avvkgrrqge rhphhhsqpl raspggshed
      181 vsrpcqswag srqgskecpg caqlapspsp qafgvdqppl peapgrrkkl ermysvdrvs
      241 ddvpirtwfp kenlfsfqta tttmqavfrg yaerkrrkre ndsasviqrn frkhlrmvgs
      301 rrvkaqtfae rrersfsrsw sdptpmkadt shdsrdssdl qsshctlgea fedldwetek
      361 gleavacdte gfvppkvmli sskvpkaeyi ptiirrddpa iipilydheh atfedileei
      421 ekklniyhkg akiwkmlifc qggpghlyll knkvatfakv ekeedmihfw krlsrlmskv
      481 npepnvihvm gcyvlgnpng eklfqnlrtl mtpyrvifes plelsaqgkq mietyfdfrl
      541 yrlwksrqhs klldfedvl
//
LOCUS       XP_061010067             534 aa            linear   MAM 02-DEC-2023
DEFINITION  NMDA receptor synaptonuclear signaling and neuronal migration
            factor isoform X3 [Dama dama].
ACCESSION   XP_061010067
VERSION     XP_061010067.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154084.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..534
                     /product="NMDA receptor synaptonuclear signaling and
                     neuronal migration factor isoform X3"
                     /calculated_mol_wt=60166
     CDS             1..534
                     /gene="NSMF"
                     /coded_by="XM_061154084.1:172..1776"
                     /db_xref="GeneID:133064247"
ORIGIN      
        1 mgavasrrra lrseamssva akvraarafg eylsqshpen rngadhllad aysghdgspe
       61 mqpapqnkrr lslisngrye gslpeeaasg kpagegpqpr vytisgepal lpgpeaeaie
      121 lavvkgrrqg erhphhhsqp lraspggshe dvsrpcqswa gsrqgskecp gcaqlapsps
      181 pqafgvdqpp lpeapgrrkk lermysvdrv sddvpirtwf pkenlfsfqt atttmqavfr
      241 gyaerkrrkr endsasviqr nfrkhlrmvg srrvkaqska qtfaerrers fsrswsdptp
      301 mkadtshdsr dssdlqsshc tlgeafedld wetekgleav acdtegfvpp kvmlisskvp
      361 kaeyiptiir rddpaiipil ydhehatfed ileeiekkln iyhkgakiwk mlifcqggpg
      421 hlyllknkva tfakvekeed mihfwkrlsr lmskvnpepn vihvmgcyvl gnpngeklfq
      481 nlrtlmtpyr vifesplels aqgkqmiety fdfrlyrlwk srqhsklldf edvl
//
LOCUS       XP_061010068             530 aa            linear   MAM 02-DEC-2023
DEFINITION  NMDA receptor synaptonuclear signaling and neuronal migration
            factor isoform X4 [Dama dama].
ACCESSION   XP_061010068
VERSION     XP_061010068.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154085.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..530
                     /product="NMDA receptor synaptonuclear signaling and
                     neuronal migration factor isoform X4"
                     /calculated_mol_wt=59751
     CDS             1..530
                     /gene="NSMF"
                     /coded_by="XM_061154085.1:170..1762"
                     /db_xref="GeneID:133064247"
ORIGIN      
        1 mgavasrrra lrseamssva akvraarafg eylsqshpen rngadhllad aysghdgspe
       61 mqpapqnkrr lslisngrye gslpeeaasg kpagegpqpr vytisgepal lpgpeaeaie
      121 lavvkgrrqg erhphhhsqp lraspggshe dvsrpcqswa gsrqgskecp gcaqlapsps
      181 pqafgvdqpp lpeapgrrkk lermysvdrv sddvpirtwf pkenlfsfqt atttmqavfr
      241 gyaerkrrkr endsasviqr nfrkhlrmvg srrvkaqtfa errersfsrs wsdptpmkad
      301 tshdsrdssd lqsshctlge afedldwete kgleavacdt egfvppkvml isskvpkaey
      361 iptiirrddp aiipilydhe hatfedilee iekklniyhk gakiwkmlif cqggpghlyl
      421 lknkvatfak vekeedmihf wkrlsrlmsk vnpepnvihv mgcyvlgnpn geklfqnlrt
      481 lmtpyrvife splelsaqgk qmietyfdfr lyrlwksrqh sklldfedvl
//
LOCUS       XP_061010069             529 aa            linear   MAM 02-DEC-2023
DEFINITION  NMDA receptor synaptonuclear signaling and neuronal migration
            factor isoform X5 [Dama dama].
ACCESSION   XP_061010069
VERSION     XP_061010069.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154086.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..529
                     /product="NMDA receptor synaptonuclear signaling and
                     neuronal migration factor isoform X5"
                     /calculated_mol_wt=59478
     CDS             1..529
                     /gene="NSMF"
                     /coded_by="XM_061154086.1:153..1742"
                     /db_xref="GeneID:133064247"
ORIGIN      
        1 mrrrldhgrr rlpeegakkr ghvlgggqsa vrprcagrqg prncdlpalg glraarafge
       61 ylsqshpenr ngadhllada ysghdgspem qpapqnkrrl slisngryeg slpeeaasgk
      121 pagegpqprv ytisgepall pgpeaeaiel avvkgrrqge rhphhhsqpl raspggshed
      181 vsrpcqswag srqgskecpg caqlapspsp qafgvdqppl peapgrrkkl ermysvdrvs
      241 ddvpirtwfp kenlfsfqta tttmqavfrg yaerkrrkre ndsasviqrn frkhlrmvgs
      301 rrvkaqssdl qsshctlgea fedldwetek gleavacdte gfvppkvmli sskvpkaeyi
      361 ptiirrddpa iipilydheh atfedileei ekklniyhkg akiwkmlifc qggpghlyll
      421 knkvatfakv ekeedmihfw krlsrlmskv npepnvihvm gcyvlgnpng eklfqnlrtl
      481 mtpyrvifes plelsaqgkq mietyfdfrl yrlwksrqhs klldfedvl
//
LOCUS       XP_061010070             523 aa            linear   MAM 02-DEC-2023
DEFINITION  NMDA receptor synaptonuclear signaling and neuronal migration
            factor isoform X6 [Dama dama].
ACCESSION   XP_061010070
VERSION     XP_061010070.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154087.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..523
                     /product="NMDA receptor synaptonuclear signaling and
                     neuronal migration factor isoform X6"
                     /calculated_mol_wt=58102
     CDS             1..523
                     /gene="NSMF"
                     /coded_by="XM_061154087.1:153..1724"
                     /db_xref="GeneID:133064247"
ORIGIN      
        1 mrrrldhgrr rlpeegakkr ghvlgggqsa vrprcagrqg prncdlpalg glraarafge
       61 ylsqshpenr ngadhllada ysghdgspem qpapqnkrrl slisngryeg slpeeaasgk
      121 pagegpqprv ytisgepall pgpeaeaiel avvkgrrqge rhphhhsqpl raspggshed
      181 vsrpcqswag srqgskecpg caqlapspsp qafgvdqppl peapgrrkkl ermysvdrvs
      241 ddvpirtwfp kenlfsfqta tttmqavfrg yaerkrrkre ndsasviqrn frkhlrmvgs
      301 rrvkaqskaq tfaerrersf srswsdptpm kadtshdsrd ssdlqsshct lgeafedldw
      361 etekgleava cdtegfvppk vmlisskvpk aeyiptiirr ddpaiipily dhehatfedi
      421 leeiekklni yhkgakiwkm lifcqggpgh lyllknkvat fakvekeedm ihfwkrlsrl
      481 mskvnpepnv ihvmgcyvlg npngekgnlr vapgavgsre add
//
LOCUS       XP_061010071             500 aa            linear   MAM 02-DEC-2023
DEFINITION  NMDA receptor synaptonuclear signaling and neuronal migration
            factor isoform X7 [Dama dama].
ACCESSION   XP_061010071
VERSION     XP_061010071.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154088.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..500
                     /product="NMDA receptor synaptonuclear signaling and
                     neuronal migration factor isoform X7"
                     /calculated_mol_wt=56212
     CDS             1..500
                     /gene="NSMF"
                     /coded_by="XM_061154088.1:172..1674"
                     /db_xref="GeneID:133064247"
ORIGIN      
        1 mgavasrrra lrseamssva akvraarafg eylsqshpen rngadhllad aysghdgspe
       61 mqpapqnkrr lslisngrye gslpeeaasg kpagegpqpr vytisgepal lpgpeaeaie
      121 lavvkgrrqg erhphhhsqp lraspggshe dvsrpcqswa gsrqgskecp gcaqlapsps
      181 pqafgvdqpp lpeapgrrkk lermysvdrv sddvpirtwf pkenlfsfqt atttmqavfr
      241 gyaerkrrkr endsasviqr nfrkhlrmvg srrvkaqssd lqsshctlge afedldwete
      301 kgleavacdt egfvppkvml isskvpkaey iptiirrddp aiipilydhe hatfedilee
      361 iekklniyhk gakiwkmlif cqggpghlyl lknkvatfak vekeedmihf wkrlsrlmsk
      421 vnpepnvihv mgcyvlgnpn geklfqnlrt lmtpyrvife splelsaqgk qmietyfdfr
      481 lyrlwksrqh sklldfedvl
//
LOCUS       XP_061010072             135 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein mL41 [Dama dama].
ACCESSION   XP_061010072
VERSION     XP_061010072.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154089.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..135
                     /product="large ribosomal subunit protein mL41"
                     /calculated_mol_wt=14930
     Region          13..125
                     /region_name="MRP-L27"
                     /note="Mitochondrial ribosomal protein L27; pfam09809"
                     /db_xref="CDD:286847"
     CDS             1..135
                     /gene="MRPL41"
                     /coded_by="XM_061154089.1:109..516"
                     /db_xref="GeneID:133064249"
ORIGIN      
        1 mgllsgaara lvrgadrmsk wtskrgprtf yksrgakgvg fhgrggrfvl vkemvpelvv
       61 pelagfklkp yvnyrapegt dvpltakqlf letaapaiek dfkagtfdpe hleqygfept
      121 qegklfqlyp knfpr
//
LOCUS       XP_061010073             915 aa            linear   MAM 02-DEC-2023
DEFINITION  exonuclease mut-7 homolog isoform X1 [Dama dama].
ACCESSION   XP_061010073
VERSION     XP_061010073.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154090.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..915
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..915
                     /product="exonuclease mut-7 homolog isoform X1"
                     /calculated_mol_wt=100786
     Region          371..566
                     /region_name="mut-7_like_exo"
                     /note="DEDDy 3'-5' exonuclease domain of Caenorhabditis
                     elegans mut-7 and similar proteins; cd06146"
                     /db_xref="CDD:176655"
     Site            order(397..400,461..462,464..466,515..516,549,553)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176655"
     Site            order(397,399,466,549,553)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176655"
     Site            order(398..400,461..462,464..465,515..516,549,553)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:176655"
     Region          622..909
                     /region_name="Mut7-C"
                     /note="Mut7-C RNAse domain; cl19501"
                     /db_xref="CDD:473177"
     CDS             1..915
                     /gene="EXD3"
                     /coded_by="XM_061154090.1:909..3656"
                     /db_xref="GeneID:133064250"
ORIGIN      
        1 mdpgdpeerp aaadpaadtt ggqdprlflq tlqtlwstre lrqlreeawk gfatlddpla
       61 tlldmldasr gfrgrgpsle awvarelerw lqaqprpgpt qgdpalkplq vravrllteg
      121 plslveplvs ifqlqdadrs pvlahihrlh qegkfkeaiv lgtklqlqay ldvekmcvpl
      181 llqdkvdlve ryvdslphlq rrlltlmdsw cqpgfdirvv arrylhvplr lerlspralg
      241 rqvlrlleqf gldpalcpsm laqqrlaalr ylcykrlver smsqeswael vqglvaqdew
      301 lqeqllqlla sqddvamaaq caldlslpee rlpatvvaem sqlrlqegta kapsehrrdd
      361 cyqlpiared iyflaswedl arhedallqp gqvvgvdlew rpsfgaggrp rvslmqvava
      421 grvflldlpq lsspaggqap rafsqlvsrl lsdpsitklg ygmagdlrsl gasypalaqa
      481 vqklqggldl lqahrqmrva drpapavdga agprglsllv qqvlgkpldk tqqlsnwdrr
      541 plgeeqlvya aadaycllev ywalcrepar fhlpgalpws lglgcsercg tqepplqkvs
      601 asprqvcspe daapevpaqa frvvcdnmlg glartlrclg vdvrvlhsge dhrqaaecgv
      661 sqarlrcgic qcftpfynqi tfhrmdhsgs ihwplmdtqa vvtcaatkeh rggqvarqeg
      721 rviltaglpy hklraqvgag rclavdcslk aqqqakavir hfnvrvtpad ifsrcqacnc
      781 dqylrvskdv mkqlvrlsvh pggpggagse aphsdgeqet gsaleeapeg ctydppcrwl
      841 edtdlqtrvp atlangtrlq lagipagvlr rprlqhfycc tgcgkvfweg shlarvtsnf
      901 qevlegtprp asgps
//
LOCUS       XP_061010074             915 aa            linear   MAM 02-DEC-2023
DEFINITION  exonuclease mut-7 homolog isoform X1 [Dama dama].
ACCESSION   XP_061010074
VERSION     XP_061010074.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154091.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..915
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..915
                     /product="exonuclease mut-7 homolog isoform X1"
                     /calculated_mol_wt=100786
     Region          371..566
                     /region_name="mut-7_like_exo"
                     /note="DEDDy 3'-5' exonuclease domain of Caenorhabditis
                     elegans mut-7 and similar proteins; cd06146"
                     /db_xref="CDD:176655"
     Site            order(397..400,461..462,464..466,515..516,549,553)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176655"
     Site            order(397,399,466,549,553)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176655"
     Site            order(398..400,461..462,464..465,515..516,549,553)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:176655"
     Region          622..909
                     /region_name="Mut7-C"
                     /note="Mut7-C RNAse domain; cl19501"
                     /db_xref="CDD:473177"
     CDS             1..915
                     /gene="EXD3"
                     /coded_by="XM_061154091.1:419..3166"
                     /db_xref="GeneID:133064250"
ORIGIN      
        1 mdpgdpeerp aaadpaadtt ggqdprlflq tlqtlwstre lrqlreeawk gfatlddpla
       61 tlldmldasr gfrgrgpsle awvarelerw lqaqprpgpt qgdpalkplq vravrllteg
      121 plslveplvs ifqlqdadrs pvlahihrlh qegkfkeaiv lgtklqlqay ldvekmcvpl
      181 llqdkvdlve ryvdslphlq rrlltlmdsw cqpgfdirvv arrylhvplr lerlspralg
      241 rqvlrlleqf gldpalcpsm laqqrlaalr ylcykrlver smsqeswael vqglvaqdew
      301 lqeqllqlla sqddvamaaq caldlslpee rlpatvvaem sqlrlqegta kapsehrrdd
      361 cyqlpiared iyflaswedl arhedallqp gqvvgvdlew rpsfgaggrp rvslmqvava
      421 grvflldlpq lsspaggqap rafsqlvsrl lsdpsitklg ygmagdlrsl gasypalaqa
      481 vqklqggldl lqahrqmrva drpapavdga agprglsllv qqvlgkpldk tqqlsnwdrr
      541 plgeeqlvya aadaycllev ywalcrepar fhlpgalpws lglgcsercg tqepplqkvs
      601 asprqvcspe daapevpaqa frvvcdnmlg glartlrclg vdvrvlhsge dhrqaaecgv
      661 sqarlrcgic qcftpfynqi tfhrmdhsgs ihwplmdtqa vvtcaatkeh rggqvarqeg
      721 rviltaglpy hklraqvgag rclavdcslk aqqqakavir hfnvrvtpad ifsrcqacnc
      781 dqylrvskdv mkqlvrlsvh pggpggagse aphsdgeqet gsaleeapeg ctydppcrwl
      841 edtdlqtrvp atlangtrlq lagipagvlr rprlqhfycc tgcgkvfweg shlarvtsnf
      901 qevlegtprp asgps
//
LOCUS       XP_061010075             915 aa            linear   MAM 02-DEC-2023
DEFINITION  exonuclease mut-7 homolog isoform X1 [Dama dama].
ACCESSION   XP_061010075
VERSION     XP_061010075.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154092.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..915
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..915
                     /product="exonuclease mut-7 homolog isoform X1"
                     /calculated_mol_wt=100786
     Region          371..566
                     /region_name="mut-7_like_exo"
                     /note="DEDDy 3'-5' exonuclease domain of Caenorhabditis
                     elegans mut-7 and similar proteins; cd06146"
                     /db_xref="CDD:176655"
     Site            order(397..400,461..462,464..466,515..516,549,553)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176655"
     Site            order(397,399,466,549,553)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176655"
     Site            order(398..400,461..462,464..465,515..516,549,553)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:176655"
     Region          622..909
                     /region_name="Mut7-C"
                     /note="Mut7-C RNAse domain; cl19501"
                     /db_xref="CDD:473177"
     CDS             1..915
                     /gene="EXD3"
                     /coded_by="XM_061154092.1:906..3653"
                     /db_xref="GeneID:133064250"
ORIGIN      
        1 mdpgdpeerp aaadpaadtt ggqdprlflq tlqtlwstre lrqlreeawk gfatlddpla
       61 tlldmldasr gfrgrgpsle awvarelerw lqaqprpgpt qgdpalkplq vravrllteg
      121 plslveplvs ifqlqdadrs pvlahihrlh qegkfkeaiv lgtklqlqay ldvekmcvpl
      181 llqdkvdlve ryvdslphlq rrlltlmdsw cqpgfdirvv arrylhvplr lerlspralg
      241 rqvlrlleqf gldpalcpsm laqqrlaalr ylcykrlver smsqeswael vqglvaqdew
      301 lqeqllqlla sqddvamaaq caldlslpee rlpatvvaem sqlrlqegta kapsehrrdd
      361 cyqlpiared iyflaswedl arhedallqp gqvvgvdlew rpsfgaggrp rvslmqvava
      421 grvflldlpq lsspaggqap rafsqlvsrl lsdpsitklg ygmagdlrsl gasypalaqa
      481 vqklqggldl lqahrqmrva drpapavdga agprglsllv qqvlgkpldk tqqlsnwdrr
      541 plgeeqlvya aadaycllev ywalcrepar fhlpgalpws lglgcsercg tqepplqkvs
      601 asprqvcspe daapevpaqa frvvcdnmlg glartlrclg vdvrvlhsge dhrqaaecgv
      661 sqarlrcgic qcftpfynqi tfhrmdhsgs ihwplmdtqa vvtcaatkeh rggqvarqeg
      721 rviltaglpy hklraqvgag rclavdcslk aqqqakavir hfnvrvtpad ifsrcqacnc
      781 dqylrvskdv mkqlvrlsvh pggpggagse aphsdgeqet gsaleeapeg ctydppcrwl
      841 edtdlqtrvp atlangtrlq lagipagvlr rprlqhfycc tgcgkvfweg shlarvtsnf
      901 qevlegtprp asgps
//
LOCUS       XP_061010076             915 aa            linear   MAM 02-DEC-2023
DEFINITION  exonuclease mut-7 homolog isoform X1 [Dama dama].
ACCESSION   XP_061010076
VERSION     XP_061010076.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154093.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..915
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..915
                     /product="exonuclease mut-7 homolog isoform X1"
                     /calculated_mol_wt=100786
     Region          371..566
                     /region_name="mut-7_like_exo"
                     /note="DEDDy 3'-5' exonuclease domain of Caenorhabditis
                     elegans mut-7 and similar proteins; cd06146"
                     /db_xref="CDD:176655"
     Site            order(397..400,461..462,464..466,515..516,549,553)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176655"
     Site            order(397,399,466,549,553)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176655"
     Site            order(398..400,461..462,464..465,515..516,549,553)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:176655"
     Region          622..909
                     /region_name="Mut7-C"
                     /note="Mut7-C RNAse domain; cl19501"
                     /db_xref="CDD:473177"
     CDS             1..915
                     /gene="EXD3"
                     /coded_by="XM_061154093.1:165..2912"
                     /db_xref="GeneID:133064250"
ORIGIN      
        1 mdpgdpeerp aaadpaadtt ggqdprlflq tlqtlwstre lrqlreeawk gfatlddpla
       61 tlldmldasr gfrgrgpsle awvarelerw lqaqprpgpt qgdpalkplq vravrllteg
      121 plslveplvs ifqlqdadrs pvlahihrlh qegkfkeaiv lgtklqlqay ldvekmcvpl
      181 llqdkvdlve ryvdslphlq rrlltlmdsw cqpgfdirvv arrylhvplr lerlspralg
      241 rqvlrlleqf gldpalcpsm laqqrlaalr ylcykrlver smsqeswael vqglvaqdew
      301 lqeqllqlla sqddvamaaq caldlslpee rlpatvvaem sqlrlqegta kapsehrrdd
      361 cyqlpiared iyflaswedl arhedallqp gqvvgvdlew rpsfgaggrp rvslmqvava
      421 grvflldlpq lsspaggqap rafsqlvsrl lsdpsitklg ygmagdlrsl gasypalaqa
      481 vqklqggldl lqahrqmrva drpapavdga agprglsllv qqvlgkpldk tqqlsnwdrr
      541 plgeeqlvya aadaycllev ywalcrepar fhlpgalpws lglgcsercg tqepplqkvs
      601 asprqvcspe daapevpaqa frvvcdnmlg glartlrclg vdvrvlhsge dhrqaaecgv
      661 sqarlrcgic qcftpfynqi tfhrmdhsgs ihwplmdtqa vvtcaatkeh rggqvarqeg
      721 rviltaglpy hklraqvgag rclavdcslk aqqqakavir hfnvrvtpad ifsrcqacnc
      781 dqylrvskdv mkqlvrlsvh pggpggagse aphsdgeqet gsaleeapeg ctydppcrwl
      841 edtdlqtrvp atlangtrlq lagipagvlr rprlqhfycc tgcgkvfweg shlarvtsnf
      901 qevlegtprp asgps
//
LOCUS       XP_061010077             907 aa            linear   MAM 02-DEC-2023
DEFINITION  exonuclease mut-7 homolog isoform X2 [Dama dama].
ACCESSION   XP_061010077
VERSION     XP_061010077.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154094.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..907
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..907
                     /product="exonuclease mut-7 homolog isoform X2"
                     /calculated_mol_wt=99888
     Region          <132..648
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          363..558
                     /region_name="mut-7_like_exo"
                     /note="DEDDy 3'-5' exonuclease domain of Caenorhabditis
                     elegans mut-7 and similar proteins; cd06146"
                     /db_xref="CDD:176655"
     Site            order(389..392,453..454,456..458,507..508,541,545)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176655"
     Site            order(389,391,458,541,545)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176655"
     Site            order(390..392,453..454,456..457,507..508,541,545)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:176655"
     Region          614..901
                     /region_name="Mut7-C"
                     /note="Mut7-C RNAse domain; cl19501"
                     /db_xref="CDD:473177"
     CDS             1..907
                     /gene="EXD3"
                     /coded_by="XM_061154094.1:910..3633"
                     /db_xref="GeneID:133064250"
ORIGIN      
        1 mdpgdpeerp aaadpaadtt ggqdprlflq tlqtlwstre lrqlreeawk gfatlddpla
       61 tlldmldasr gfrgrgpsle awvarelerw lqaqprpgpt qgdpalkplq vravrllteg
      121 plslveplvs ifqlqdadrs pvlahihrlh qegkfkeaiv lgtklqlqay ldvekdkvdl
      181 veryvdslph lqrrlltlmd swcqpgfdir vvarrylhvp lrlerlspra lgrqvlrlle
      241 qfgldpalcp smlaqqrlaa lrylcykrlv ersmsqeswa elvqglvaqd ewlqeqllql
      301 lasqddvama aqcaldlslp eerlpatvva emsqlrlqeg takapsehrr ddcyqlpiar
      361 ediyflaswe dlarhedall qpgqvvgvdl ewrpsfgagg rprvslmqva vagrvflldl
      421 pqlsspaggq aprafsqlvs rllsdpsitk lgygmagdlr slgasypala qavqklqggl
      481 dllqahrqmr vadrpapavd gaagprglsl lvqqvlgkpl dktqqlsnwd rrplgeeqlv
      541 yaaadaycll evywalcrep arfhlpgalp wslglgcser cgtqepplqk vsasprqvcs
      601 pedaapevpa qafrvvcdnm lgglartlrc lgvdvrvlhs gedhrqaaec gvsqarlrcg
      661 icqcftpfyn qitfhrmdhs gsihwplmdt qavvtcaatk ehrggqvarq egrviltagl
      721 pyhklraqvg agrclavdcs lkaqqqakav irhfnvrvtp adifsrcqac ncdqylrvsk
      781 dvmkqlvrls vhpggpggag seaphsdgeq etgsaleeap egctydppcr wledtdlqtr
      841 vpatlangtr lqlagipagv lrrprlqhfy cctgcgkvfw egshlarvts nfqevlegtp
      901 rpasgps
//
LOCUS       XP_061010078             858 aa            linear   MAM 02-DEC-2023
DEFINITION  exonuclease mut-7 homolog isoform X3 [Dama dama].
ACCESSION   XP_061010078
VERSION     XP_061010078.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154095.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..858
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..858
                     /product="exonuclease mut-7 homolog isoform X3"
                     /calculated_mol_wt=94408
     Region          371..566
                     /region_name="mut-7_like_exo"
                     /note="DEDDy 3'-5' exonuclease domain of Caenorhabditis
                     elegans mut-7 and similar proteins; cd06146"
                     /db_xref="CDD:176655"
     Site            order(397..400,461..462,464..466,515..516,549,553)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176655"
     Site            order(397,399,466,549,553)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176655"
     Site            order(398..400,461..462,464..465,515..516,549,553)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:176655"
     Region          622..852
                     /region_name="Mut7-C"
                     /note="Mut7-C RNAse domain; cl19501"
                     /db_xref="CDD:473177"
     CDS             1..858
                     /gene="EXD3"
                     /coded_by="XM_061154095.1:906..3482"
                     /db_xref="GeneID:133064250"
ORIGIN      
        1 mdpgdpeerp aaadpaadtt ggqdprlflq tlqtlwstre lrqlreeawk gfatlddpla
       61 tlldmldasr gfrgrgpsle awvarelerw lqaqprpgpt qgdpalkplq vravrllteg
      121 plslveplvs ifqlqdadrs pvlahihrlh qegkfkeaiv lgtklqlqay ldvekmcvpl
      181 llqdkvdlve ryvdslphlq rrlltlmdsw cqpgfdirvv arrylhvplr lerlspralg
      241 rqvlrlleqf gldpalcpsm laqqrlaalr ylcykrlver smsqeswael vqglvaqdew
      301 lqeqllqlla sqddvamaaq caldlslpee rlpatvvaem sqlrlqegta kapsehrrdd
      361 cyqlpiared iyflaswedl arhedallqp gqvvgvdlew rpsfgaggrp rvslmqvava
      421 grvflldlpq lsspaggqap rafsqlvsrl lsdpsitklg ygmagdlrsl gasypalaqa
      481 vqklqggldl lqahrqmrva drpapavdga agprglsllv qqvlgkpldk tqqlsnwdrr
      541 plgeeqlvya aadaycllev ywalcrepar fhlpgalpws lglgcsercg tqepplqkvs
      601 asprqvcspe daapevpaqa frvvcdnmlg glartlrclg vdvrvlhsge dhrqaaevar
      661 qegrviltag lpyhklraqv gagrclavdc slkaqqqaka virhfnvrvt padifsrcqa
      721 cncdqylrvs kdvmkqlvrl svhpggpgga gseaphsdge qetgsaleea pegctydppc
      781 rwledtdlqt rvpatlangt rlqlagipag vlrrprlqhf ycctgcgkvf wegshlarvt
      841 snfqevlegt prpasgps
//
LOCUS       XP_061010080             851 aa            linear   MAM 02-DEC-2023
DEFINITION  exonuclease mut-7 homolog isoform X4 [Dama dama].
ACCESSION   XP_061010080
VERSION     XP_061010080.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154097.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..851
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..851
                     /product="exonuclease mut-7 homolog isoform X4"
                     /calculated_mol_wt=93694
     Region          307..502
                     /region_name="mut-7_like_exo"
                     /note="DEDDy 3'-5' exonuclease domain of Caenorhabditis
                     elegans mut-7 and similar proteins; cd06146"
                     /db_xref="CDD:176655"
     Site            order(333..336,397..398,400..402,451..452,485,489)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176655"
     Site            order(333,335,402,485,489)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176655"
     Site            order(334..336,397..398,400..401,451..452,485,489)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:176655"
     Region          558..845
                     /region_name="Mut7-C"
                     /note="Mut7-C RNAse domain; cl19501"
                     /db_xref="CDD:473177"
     CDS             1..851
                     /gene="EXD3"
                     /coded_by="XM_061154097.1:159..2714"
                     /db_xref="GeneID:133064250"
ORIGIN      
        1 mldasrgfrg rgpsleawva relerwlqaq prpgptqgdp alkplqvrav rlltegplsl
       61 veplvsifql qdadrspvla hihrlhqegk fkeaivlgtk lqlqayldve kmcvplllqd
      121 kvdlveryvd slphlqrrll tlmdswcqpg fdirvvarry lhvplrlerl spralgrqvl
      181 rlleqfgldp alcpsmlaqq rlaalrylcy krlversmsq eswaelvqgl vaqdewlqeq
      241 llqllasqdd vamaaqcald lslpeerlpa tvvaemsqlr lqegtakaps ehrrddcyql
      301 piarediyfl aswedlarhe dallqpgqvv gvdlewrpsf gaggrprvsl mqvavagrvf
      361 lldlpqlssp aggqaprafs qlvsrllsdp sitklgygma gdlrslgasy palaqavqkl
      421 qggldllqah rqmrvadrpa pavdgaagpr glsllvqqvl gkpldktqql snwdrrplge
      481 eqlvyaaada ycllevywal creparfhlp galpwslglg csercgtqep plqkvsaspr
      541 qvcspedaap evpaqafrvv cdnmlgglar tlrclgvdvr vlhsgedhrq aaecgvsqar
      601 lrcgicqcft pfynqitfhr mdhsgsihwp lmdtqavvtc aatkehrggq varqegrvil
      661 taglpyhklr aqvgagrcla vdcslkaqqq akavirhfnv rvtpadifsr cqacncdqyl
      721 rvskdvmkql vrlsvhpggp ggagseaphs dgeqetgsal eeapegctyd ppcrwledtd
      781 lqtrvpatla ngtrlqlagi pagvlrrprl qhfycctgcg kvfwegshla rvtsnfqevl
      841 egtprpasgp s
//
LOCUS       XP_061010081             851 aa            linear   MAM 02-DEC-2023
DEFINITION  exonuclease mut-7 homolog isoform X4 [Dama dama].
ACCESSION   XP_061010081
VERSION     XP_061010081.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154098.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..851
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..851
                     /product="exonuclease mut-7 homolog isoform X4"
                     /calculated_mol_wt=93694
     Region          307..502
                     /region_name="mut-7_like_exo"
                     /note="DEDDy 3'-5' exonuclease domain of Caenorhabditis
                     elegans mut-7 and similar proteins; cd06146"
                     /db_xref="CDD:176655"
     Site            order(333..336,397..398,400..402,451..452,485,489)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176655"
     Site            order(333,335,402,485,489)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176655"
     Site            order(334..336,397..398,400..401,451..452,485,489)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:176655"
     Region          558..845
                     /region_name="Mut7-C"
                     /note="Mut7-C RNAse domain; cl19501"
                     /db_xref="CDD:473177"
     CDS             1..851
                     /gene="EXD3"
                     /coded_by="XM_061154098.1:145..2700"
                     /db_xref="GeneID:133064250"
ORIGIN      
        1 mldasrgfrg rgpsleawva relerwlqaq prpgptqgdp alkplqvrav rlltegplsl
       61 veplvsifql qdadrspvla hihrlhqegk fkeaivlgtk lqlqayldve kmcvplllqd
      121 kvdlveryvd slphlqrrll tlmdswcqpg fdirvvarry lhvplrlerl spralgrqvl
      181 rlleqfgldp alcpsmlaqq rlaalrylcy krlversmsq eswaelvqgl vaqdewlqeq
      241 llqllasqdd vamaaqcald lslpeerlpa tvvaemsqlr lqegtakaps ehrrddcyql
      301 piarediyfl aswedlarhe dallqpgqvv gvdlewrpsf gaggrprvsl mqvavagrvf
      361 lldlpqlssp aggqaprafs qlvsrllsdp sitklgygma gdlrslgasy palaqavqkl
      421 qggldllqah rqmrvadrpa pavdgaagpr glsllvqqvl gkpldktqql snwdrrplge
      481 eqlvyaaada ycllevywal creparfhlp galpwslglg csercgtqep plqkvsaspr
      541 qvcspedaap evpaqafrvv cdnmlgglar tlrclgvdvr vlhsgedhrq aaecgvsqar
      601 lrcgicqcft pfynqitfhr mdhsgsihwp lmdtqavvtc aatkehrggq varqegrvil
      661 taglpyhklr aqvgagrcla vdcslkaqqq akavirhfnv rvtpadifsr cqacncdqyl
      721 rvskdvmkql vrlsvhpggp ggagseaphs dgeqetgsal eeapegctyd ppcrwledtd
      781 lqtrvpatla ngtrlqlagi pagvlrrprl qhfycctgcg kvfwegshla rvtsnfqevl
      841 egtprpasgp s
//
LOCUS       XP_061010082             814 aa            linear   MAM 02-DEC-2023
DEFINITION  exonuclease mut-7 homolog isoform X5 [Dama dama].
ACCESSION   XP_061010082
VERSION     XP_061010082.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154099.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..814
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..814
                     /product="exonuclease mut-7 homolog isoform X5"
                     /calculated_mol_wt=90113
     Region          371..566
                     /region_name="mut-7_like_exo"
                     /note="DEDDy 3'-5' exonuclease domain of Caenorhabditis
                     elegans mut-7 and similar proteins; cd06146"
                     /db_xref="CDD:176655"
     Site            order(397..400,461..462,464..466,515..516,549,553)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176655"
     Site            order(397,399,466,549,553)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176655"
     Site            order(398..400,461..462,464..465,515..516,549,553)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:176655"
     Region          622..>659
                     /region_name="Mut7-C"
                     /note="Mut7-C RNAse domain; cl19501"
                     /db_xref="CDD:473177"
     CDS             1..814
                     /gene="EXD3"
                     /coded_by="XM_061154099.1:912..3356"
                     /db_xref="GeneID:133064250"
ORIGIN      
        1 mdpgdpeerp aaadpaadtt ggqdprlflq tlqtlwstre lrqlreeawk gfatlddpla
       61 tlldmldasr gfrgrgpsle awvarelerw lqaqprpgpt qgdpalkplq vravrllteg
      121 plslveplvs ifqlqdadrs pvlahihrlh qegkfkeaiv lgtklqlqay ldvekmcvpl
      181 llqdkvdlve ryvdslphlq rrlltlmdsw cqpgfdirvv arrylhvplr lerlspralg
      241 rqvlrlleqf gldpalcpsm laqqrlaalr ylcykrlver smsqeswael vqglvaqdew
      301 lqeqllqlla sqddvamaaq caldlslpee rlpatvvaem sqlrlqegta kapsehrrdd
      361 cyqlpiared iyflaswedl arhedallqp gqvvgvdlew rpsfgaggrp rvslmqvava
      421 grvflldlpq lsspaggqap rafsqlvsrl lsdpsitklg ygmagdlrsl gasypalaqa
      481 vqklqggldl lqahrqmrva drpapavdga agprglsllv qqvlgkpldk tqqlsnwdrr
      541 plgeeqlvya aadaycllev ywalcrepar fhlpgalpws lglgcsercg tqepplqkvs
      601 asprqvcspe daapevpaqa frvvcdnmlg glartlrclg vdvrvlhsge dhrqaaecgv
      661 sqarlrcgic qcftpfynqi tfhrmdhsgs ihwplmdtqa vvtcaatkeh rggqgphrrr
      721 qwhptpvllp gesrgwrslv gcsqwgrees dtterlhfpf slscigegng dplqcsclen
      781 prdggarwaa vcgvaqgrtr lkrlssssss rdlt
//
LOCUS       XP_061010083             757 aa            linear   MAM 02-DEC-2023
DEFINITION  exonuclease mut-7 homolog isoform X6 [Dama dama].
ACCESSION   XP_061010083
VERSION     XP_061010083.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154100.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..757
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..757
                     /product="exonuclease mut-7 homolog isoform X6"
                     /calculated_mol_wt=83734
     Region          371..566
                     /region_name="mut-7_like_exo"
                     /note="DEDDy 3'-5' exonuclease domain of Caenorhabditis
                     elegans mut-7 and similar proteins; cd06146"
                     /db_xref="CDD:176655"
     Site            order(397..400,461..462,464..466,515..516,549,553)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176655"
     Site            order(397,399,466,549,553)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176655"
     Site            order(398..400,461..462,464..465,515..516,549,553)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:176655"
     Region          622..>651
                     /region_name="Mut7-C"
                     /note="Mut7-C RNAse domain; cl19501"
                     /db_xref="CDD:473177"
     CDS             1..757
                     /gene="EXD3"
                     /coded_by="XM_061154100.1:910..3183"
                     /db_xref="GeneID:133064250"
ORIGIN      
        1 mdpgdpeerp aaadpaadtt ggqdprlflq tlqtlwstre lrqlreeawk gfatlddpla
       61 tlldmldasr gfrgrgpsle awvarelerw lqaqprpgpt qgdpalkplq vravrllteg
      121 plslveplvs ifqlqdadrs pvlahihrlh qegkfkeaiv lgtklqlqay ldvekmcvpl
      181 llqdkvdlve ryvdslphlq rrlltlmdsw cqpgfdirvv arrylhvplr lerlspralg
      241 rqvlrlleqf gldpalcpsm laqqrlaalr ylcykrlver smsqeswael vqglvaqdew
      301 lqeqllqlla sqddvamaaq caldlslpee rlpatvvaem sqlrlqegta kapsehrrdd
      361 cyqlpiared iyflaswedl arhedallqp gqvvgvdlew rpsfgaggrp rvslmqvava
      421 grvflldlpq lsspaggqap rafsqlvsrl lsdpsitklg ygmagdlrsl gasypalaqa
      481 vqklqggldl lqahrqmrva drpapavdga agprglsllv qqvlgkpldk tqqlsnwdrr
      541 plgeeqlvya aadaycllev ywalcrepar fhlpgalpws lglgcsercg tqepplqkvs
      601 asprqvcspe daapevpaqa frvvcdnmlg glartlrclg vdvrvlhsge dhrqaaegph
      661 rrrqwhptpv llpgesrgwr slvgcsqwgr eesdtterlh fpfslscige gngdplqcsc
      721 lenprdggar waavcgvaqg rtrlkrlsss sssrdlt
//
LOCUS       XP_061010084             750 aa            linear   MAM 02-DEC-2023
DEFINITION  exonuclease mut-7 homolog isoform X7 [Dama dama].
ACCESSION   XP_061010084
VERSION     XP_061010084.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154101.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..750
                     /product="exonuclease mut-7 homolog isoform X7"
                     /calculated_mol_wt=83068
     Region          371..566
                     /region_name="mut-7_like_exo"
                     /note="DEDDy 3'-5' exonuclease domain of Caenorhabditis
                     elegans mut-7 and similar proteins; cd06146"
                     /db_xref="CDD:176655"
     Site            order(397..400,461..462,464..466,515..516,549,553)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176655"
     Site            order(397,399,466,549,553)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176655"
     Site            order(398..400,461..462,464..465,515..516,549,553)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:176655"
     Region          622..>659
                     /region_name="Mut7-C"
                     /note="Mut7-C RNAse domain; cl19501"
                     /db_xref="CDD:473177"
     CDS             1..750
                     /gene="EXD3"
                     /coded_by="XM_061154101.1:910..3162"
                     /db_xref="GeneID:133064250"
ORIGIN      
        1 mdpgdpeerp aaadpaadtt ggqdprlflq tlqtlwstre lrqlreeawk gfatlddpla
       61 tlldmldasr gfrgrgpsle awvarelerw lqaqprpgpt qgdpalkplq vravrllteg
      121 plslveplvs ifqlqdadrs pvlahihrlh qegkfkeaiv lgtklqlqay ldvekmcvpl
      181 llqdkvdlve ryvdslphlq rrlltlmdsw cqpgfdirvv arrylhvplr lerlspralg
      241 rqvlrlleqf gldpalcpsm laqqrlaalr ylcykrlver smsqeswael vqglvaqdew
      301 lqeqllqlla sqddvamaaq caldlslpee rlpatvvaem sqlrlqegta kapsehrrdd
      361 cyqlpiared iyflaswedl arhedallqp gqvvgvdlew rpsfgaggrp rvslmqvava
      421 grvflldlpq lsspaggqap rafsqlvsrl lsdpsitklg ygmagdlrsl gasypalaqa
      481 vqklqggldl lqahrqmrva drpapavdga agprglsllv qqvlgkpldk tqqlsnwdrr
      541 plgeeqlvya aadaycllev ywalcrepar fhlpgalpws lglgcsercg tqepplqkvs
      601 asprqvcspe daapevpaqa frvvcdnmlg glartlrclg vdvrvlhsge dhrqaaecgv
      661 sqarlrcgic qcftpfynqi tfhrmdhsgs ihwplmdtqa vvtcaatkeh rgtsqekama
      721 phssplawri pwmeepgglq svgsrrvghd
//
LOCUS       XP_061010085             727 aa            linear   MAM 02-DEC-2023
DEFINITION  exonuclease mut-7 homolog isoform X8 [Dama dama].
ACCESSION   XP_061010085
VERSION     XP_061010085.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154102.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..727
                     /product="exonuclease mut-7 homolog isoform X8"
                     /calculated_mol_wt=80379
     Region          371..566
                     /region_name="mut-7_like_exo"
                     /note="DEDDy 3'-5' exonuclease domain of Caenorhabditis
                     elegans mut-7 and similar proteins; cd06146"
                     /db_xref="CDD:176655"
     Site            order(397..400,461..462,464..466,515..516,549,553)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176655"
     Site            order(397,399,466,549,553)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176655"
     Site            order(398..400,461..462,464..465,515..516,549,553)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:176655"
     Region          622..>659
                     /region_name="Mut7-C"
                     /note="Mut7-C RNAse domain; cl19501"
                     /db_xref="CDD:473177"
     CDS             1..727
                     /gene="EXD3"
                     /coded_by="XM_061154102.1:909..3092"
                     /db_xref="GeneID:133064250"
ORIGIN      
        1 mdpgdpeerp aaadpaadtt ggqdprlflq tlqtlwstre lrqlreeawk gfatlddpla
       61 tlldmldasr gfrgrgpsle awvarelerw lqaqprpgpt qgdpalkplq vravrllteg
      121 plslveplvs ifqlqdadrs pvlahihrlh qegkfkeaiv lgtklqlqay ldvekmcvpl
      181 llqdkvdlve ryvdslphlq rrlltlmdsw cqpgfdirvv arrylhvplr lerlspralg
      241 rqvlrlleqf gldpalcpsm laqqrlaalr ylcykrlver smsqeswael vqglvaqdew
      301 lqeqllqlla sqddvamaaq caldlslpee rlpatvvaem sqlrlqegta kapsehrrdd
      361 cyqlpiared iyflaswedl arhedallqp gqvvgvdlew rpsfgaggrp rvslmqvava
      421 grvflldlpq lsspaggqap rafsqlvsrl lsdpsitklg ygmagdlrsl gasypalaqa
      481 vqklqggldl lqahrqmrva drpapavdga agprglsllv qqvlgkpldk tqqlsnwdrr
      541 plgeeqlvya aadaycllev ywalcrepar fhlpgalpws lglgcsercg tqepplqkvs
      601 asprqvcspe daapevpaqa frvvcdnmlg glartlrclg vdvrvlhsge dhrqaaecgv
      661 sqarlrcgic qcftpfynqi tfhrmdhsgs ihwplmdtqa vvtcaatkeh rggqviitlp
      721 grrggss
//
LOCUS       XP_061010086             727 aa            linear   MAM 02-DEC-2023
DEFINITION  exonuclease mut-7 homolog isoform X9 [Dama dama].
ACCESSION   XP_061010086
VERSION     XP_061010086.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154103.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..727
                     /product="exonuclease mut-7 homolog isoform X9"
                     /calculated_mol_wt=79345
     Region          183..378
                     /region_name="mut-7_like_exo"
                     /note="DEDDy 3'-5' exonuclease domain of Caenorhabditis
                     elegans mut-7 and similar proteins; cd06146"
                     /db_xref="CDD:176655"
     Site            order(209..212,273..274,276..278,327..328,361,365)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176655"
     Site            order(209,211,278,361,365)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176655"
     Site            order(210..212,273..274,276..277,327..328,361,365)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:176655"
     Region          434..721
                     /region_name="Mut7-C"
                     /note="Mut7-C RNAse domain; cl19501"
                     /db_xref="CDD:473177"
     CDS             1..727
                     /gene="EXD3"
                     /coded_by="XM_061154103.1:642..2825"
                     /db_xref="GeneID:133064250"
ORIGIN      
        1 mqavcgmeph phqdlyrpcg psyrwtdrqe twpceppwpl ppqgqvealr tpsppaqqcc
       61 gemqaerrar ertparspws lswgllvsrg qpppceglqg lreeglvaqd ewlqeqllql
      121 lasqddvama aqcaldlslp eerlpatvva emsqlrlqeg takapsehrr ddcyqlpiar
      181 ediyflaswe dlarhedall qpgqvvgvdl ewrpsfgagg rprvslmqva vagrvflldl
      241 pqlsspaggq aprafsqlvs rllsdpsitk lgygmagdlr slgasypala qavqklqggl
      301 dllqahrqmr vadrpapavd gaagprglsl lvqqvlgkpl dktqqlsnwd rrplgeeqlv
      361 yaaadaycll evywalcrep arfhlpgalp wslglgcser cgtqepplqk vsasprqvcs
      421 pedaapevpa qafrvvcdnm lgglartlrc lgvdvrvlhs gedhrqaaec gvsqarlrcg
      481 icqcftpfyn qitfhrmdhs gsihwplmdt qavvtcaatk ehrggqvarq egrviltagl
      541 pyhklraqvg agrclavdcs lkaqqqakav irhfnvrvtp adifsrcqac ncdqylrvsk
      601 dvmkqlvrls vhpggpggag seaphsdgeq etgsaleeap egctydppcr wledtdlqtr
      661 vpatlangtr lqlagipagv lrrprlqhfy cctgcgkvfw egshlarvts nfqevlegtp
      721 rpasgps
//
LOCUS       XP_061010087             697 aa            linear   MAM 02-DEC-2023
DEFINITION  exonuclease mut-7 homolog isoform X10 [Dama dama].
ACCESSION   XP_061010087
VERSION     XP_061010087.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154104.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..697
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..697
                     /product="exonuclease mut-7 homolog isoform X10"
                     /calculated_mol_wt=76669
     Region          371..566
                     /region_name="mut-7_like_exo"
                     /note="DEDDy 3'-5' exonuclease domain of Caenorhabditis
                     elegans mut-7 and similar proteins; cd06146"
                     /db_xref="CDD:176655"
     Site            order(397..400,461..462,464..466,515..516,549,553)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176655"
     Site            order(397,399,466,549,553)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176655"
     Site            order(398..400,461..462,464..465,515..516,549,553)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:176655"
     Region          622..>651
                     /region_name="Mut7-C"
                     /note="Mut7-C RNAse domain; cl19501"
                     /db_xref="CDD:473177"
     CDS             1..697
                     /gene="EXD3"
                     /coded_by="XM_061154104.1:908..3001"
                     /db_xref="GeneID:133064250"
ORIGIN      
        1 mdpgdpeerp aaadpaadtt ggqdprlflq tlqtlwstre lrqlreeawk gfatlddpla
       61 tlldmldasr gfrgrgpsle awvarelerw lqaqprpgpt qgdpalkplq vravrllteg
      121 plslveplvs ifqlqdadrs pvlahihrlh qegkfkeaiv lgtklqlqay ldvekmcvpl
      181 llqdkvdlve ryvdslphlq rrlltlmdsw cqpgfdirvv arrylhvplr lerlspralg
      241 rqvlrlleqf gldpalcpsm laqqrlaalr ylcykrlver smsqeswael vqglvaqdew
      301 lqeqllqlla sqddvamaaq caldlslpee rlpatvvaem sqlrlqegta kapsehrrdd
      361 cyqlpiared iyflaswedl arhedallqp gqvvgvdlew rpsfgaggrp rvslmqvava
      421 grvflldlpq lsspaggqap rafsqlvsrl lsdpsitklg ygmagdlrsl gasypalaqa
      481 vqklqggldl lqahrqmrva drpapavdga agprglsllv qqvlgkpldk tqqlsnwdrr
      541 plgeeqlvya aadaycllev ywalcrepar fhlpgalpws lglgcsercg tqepplqkvs
      601 asprqvcspe daapevpaqa frvvcdnmlg glartlrclg vdvrvlhsge dhrqaaepat
      661 pslrlqepgg sdgkepagna gdldpiprlp grrggss
//
LOCUS       XP_061010088             545 aa            linear   MAM 02-DEC-2023
DEFINITION  ectonucleoside triphosphate diphosphohydrolase 8 isoform X1 [Dama
            dama].
ACCESSION   XP_061010088
VERSION     XP_061010088.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154105.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..545
                     /product="ectonucleoside triphosphate diphosphohydrolase 8
                     isoform X1"
                     /calculated_mol_wt=58615
     Region          68..499
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
     CDS             1..545
                     /gene="ENTPD8"
                     /coded_by="XM_061154105.1:62..1699"
                     /db_xref="GeneID:133064252"
ORIGIN      
        1 mvqlpprgll llinspgvgh lspredegrs sqrsrgaprg ptgasptptm gltwkqrvfk
       61 allgaaavsg ltalllilvg tvnvllptdt kfgivfdags shtslfvyqw padkendtgv
      121 vsqalacqae gpgissyasd parvgeslqg cleealalip kakhhetpmf lgatagmrll
      181 slknrsqaed vfaavsqalg qspadfqgae lltgqdegaf gwitvnyvlg llvkysfsge
      241 wiqpleetlv galdmggast qitfvpggpi ldkttqatfr lygadhtvyt hsylcfgrdq
      301 alsrllvelv qaspgllvrh pcyhsgyrdt lalaplyesp cilaaappdl sqnltvegtg
      361 npgaciealr klfnfsscdg radcafagvy qppvqgqfya fsnfyytfhf lnltsrpsls
      421 eanatiwefc lqpwklveas appgqdrwlr dycasglyil tllvegygfs eetwgglefr
      481 qqaggtdigw tlgymlnltn lipaeapaqw raqsfsiwta gvvfvvltlt atlgamvvhv
      541 fwlqd
//
LOCUS       XP_061010090             496 aa            linear   MAM 02-DEC-2023
DEFINITION  ectonucleoside triphosphate diphosphohydrolase 8 isoform X2 [Dama
            dama].
ACCESSION   XP_061010090
VERSION     XP_061010090.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154107.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..496
                     /product="ectonucleoside triphosphate diphosphohydrolase 8
                     isoform X2"
                     /calculated_mol_wt=53531
     Region          19..450
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
     CDS             1..496
                     /gene="ENTPD8"
                     /coded_by="XM_061154107.1:272..1762"
                     /db_xref="GeneID:133064252"
ORIGIN      
        1 mgltwkqrvf kallgaaavs gltalllilv gtvnvllptd tkfgivfdag sshtslfvyq
       61 wpadkendtg vvsqalacqa egpgissyas dparvgeslq gcleealali pkakhhetpm
      121 flgatagmrl lslknrsqae dvfaavsqal gqspadfqga elltgqdega fgwitvnyvl
      181 gllvkysfsg ewiqpleetl vgaldmggas tqitfvpggp ildkttqatf rlygadhtvy
      241 thsylcfgrd qalsrllvel vqaspgllvr hpcyhsgyrd tlalaplyes pcilaaappd
      301 lsqnltvegt gnpgacieal rklfnfsscd gradcafagv yqppvqgqfy afsnfyytfh
      361 flnltsrpsl seanatiwef clqpwklvea sappgqdrwl rdycasglyi ltllvegygf
      421 seetwgglef rqqaggtdig wtlgymlnlt nlipaeapaq wraqsfsiwt agvvfvvltl
      481 tatlgamvvh vfwlqd
//
LOCUS       XP_061010091             536 aa            linear   MAM 02-DEC-2023
DEFINITION  NADPH oxidase activator 1 isoform X1 [Dama dama].
ACCESSION   XP_061010091
VERSION     XP_061010091.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154108.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..536
                     /product="NADPH oxidase activator 1 isoform X1"
                     /calculated_mol_wt=56796
     Region          <12..164
                     /region_name="NlpI"
                     /note="Lipoprotein NlpI, contains TPR repeats [Cell
                     wall/membrane/envelope biogenesis]; COG4785"
                     /db_xref="CDD:443815"
     Site            order(12,15..16,18,39,42..43,46..47,49..50,73,76..77,
                     80..81,84)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          <14..454
                     /region_name="COG3899"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443106"
     Region          37..67
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          72..100
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          312..>374
                     /region_name="PB1"
                     /note="The PB1 domain is a modular domain mediating
                     specific protein-protein interactions which play a role in
                     many critical cell processes, such as osteoclastogenesis,
                     angiogenesis, early cardiovascular development, and cell
                     polarity. A canonical PB1-PB1...; cl02720"
                     /db_xref="CDD:413452"
     Site            order(313,315,320..322,336,340)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(313,315,319..321,336)
                     /site_type="other"
                     /note="PB1 interaction [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(315,340)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(359,372)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(359,372)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(359,372)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(359,372)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99732"
     Region          <508..531
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
     CDS             1..536
                     /gene="NOXA1"
                     /coded_by="XM_061154108.1:237..1847"
                     /db_xref="GeneID:133064253"
ORIGIN      
        1 mtslgdllrd whqgaqavar gdwdcalrlf ssvsepparv sfnvgcvhll agdpeaalra
       61 fdqavtkdtc lavgflqrgv anfqlerfqe alsdfqrtla qlrdnttidy tqlglrfklq
      121 awevlvnvaa vqsqlglwak aacslgdais kgpegarsdl dialgqvqkq vplqprqvpr
      181 gevfrphrrh lehlepvdfl gkakvlasal aadsqraapl qpqaldacae arpgaaacpr
      241 tpadtemevs sgqagqhdhs tpvtresahg ehagqqvppg llaaggpgpg pseepagsgg
      301 vtsrdseslv tvtvqcaltl tltaprgadl sslralmsqa lprhaqhaql rwarttwqgg
      361 egalgwapls ralqegrarq rlsrsevstl rscsptqppl rrlfaatetp armgagcpcl
      421 gmrrcggpgg trpapgvcsc sagewaagrp strwwpstsi pprgpriwpc sretpwtsca
      481 kvepalpgpg vpnggsahrr sdmlipavdq awleghcdgr vgifpksfag paarht
//
LOCUS       XP_061010092             531 aa            linear   MAM 02-DEC-2023
DEFINITION  NADPH oxidase activator 1 isoform X2 [Dama dama].
ACCESSION   XP_061010092
VERSION     XP_061010092.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154109.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..531
                     /product="NADPH oxidase activator 1 isoform X2"
                     /calculated_mol_wt=56178
     Region          <12..164
                     /region_name="NlpI"
                     /note="Lipoprotein NlpI, contains TPR repeats [Cell
                     wall/membrane/envelope biogenesis]; COG4785"
                     /db_xref="CDD:443815"
     Site            order(12,15..16,18,39,42..43,46..47,49..50,73,76..77,
                     80..81,84)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          <14..454
                     /region_name="COG3899"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443106"
     Region          37..67
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          72..100
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          312..>374
                     /region_name="PB1"
                     /note="The PB1 domain is a modular domain mediating
                     specific protein-protein interactions which play a role in
                     many critical cell processes, such as osteoclastogenesis,
                     angiogenesis, early cardiovascular development, and cell
                     polarity. A canonical PB1-PB1...; cl02720"
                     /db_xref="CDD:413452"
     Site            order(313,315,320..322,336,340)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(313,315,319..321,336)
                     /site_type="other"
                     /note="PB1 interaction [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(315,340)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(359,372)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(359,372)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(359,372)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(359,372)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99732"
     CDS             1..531
                     /gene="NOXA1"
                     /coded_by="XM_061154109.1:237..1832"
                     /db_xref="GeneID:133064253"
ORIGIN      
        1 mtslgdllrd whqgaqavar gdwdcalrlf ssvsepparv sfnvgcvhll agdpeaalra
       61 fdqavtkdtc lavgflqrgv anfqlerfqe alsdfqrtla qlrdnttidy tqlglrfklq
      121 awevlvnvaa vqsqlglwak aacslgdais kgpegarsdl dialgqvqkq vplqprqvpr
      181 gevfrphrrh lehlepvdfl gkakvlasal aadsqraapl qpqaldacae arpgaaacpr
      241 tpadtemevs sgqagqhdhs tpvtresahg ehagqqvppg llaaggpgpg pseepagsgg
      301 vtsrdseslv tvtvqcaltl tltaprgadl sslralmsqa lprhaqhaql rwarttwqgg
      361 egalgwapls ralqegrarq rlsrsevstl rscsptqppl rrlfaatetp armgagcpcl
      421 gmrrcggpgg trpapgvcsc sagewaagrp strwwpstsi pprgpriwpc sretpwtsca
      481 kwtrhgwrat vmgasasspr alparlrgtp eelggggqgg eglikasash v
//
LOCUS       XP_061010093             516 aa            linear   MAM 02-DEC-2023
DEFINITION  NADPH oxidase activator 1 isoform X3 [Dama dama].
ACCESSION   XP_061010093
VERSION     XP_061010093.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154110.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..516
                     /product="NADPH oxidase activator 1 isoform X3"
                     /calculated_mol_wt=54746
     Site            order(12,15..16,18,53,56..57,60..61,63..64,103,106..107,
                     110..111,114)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          12..46
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          <14..144
                     /region_name="NlpI"
                     /note="Lipoprotein NlpI, contains TPR repeats [Cell
                     wall/membrane/envelope biogenesis]; COG4785"
                     /db_xref="CDD:443815"
     Region          <17..434
                     /region_name="COG3899"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443106"
     Region          51..81
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          292..>354
                     /region_name="PB1"
                     /note="The PB1 domain is a modular domain mediating
                     specific protein-protein interactions which play a role in
                     many critical cell processes, such as osteoclastogenesis,
                     angiogenesis, early cardiovascular development, and cell
                     polarity. A canonical PB1-PB1...; cl02720"
                     /db_xref="CDD:413452"
     Site            order(293,295,300..302,316,320)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(293,295,299..301,316)
                     /site_type="other"
                     /note="PB1 interaction [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(295,320)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(339,352)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(339,352)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(339,352)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(339,352)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99732"
     Region          <488..511
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
     CDS             1..516
                     /gene="NOXA1"
                     /coded_by="XM_061154110.1:238..1788"
                     /db_xref="GeneID:133064253"
ORIGIN      
        1 mtslgdllrd whqgaqavar gdwdcalrlf ssvseppara fdqavtkdtc lavgflqrgv
       61 anfqlerfqe alsdfqrtla qlrdnttidy tqlglrfklq awevlvnvaa vqsqlglwak
      121 aacslgdais kgpegarsdl dialgqvqkq vplqprqvpr gevfrphrrh lehlepvdfl
      181 gkakvlasal aadsqraapl qpqaldacae arpgaaacpr tpadtemevs sgqagqhdhs
      241 tpvtresahg ehagqqvppg llaaggpgpg pseepagsgg vtsrdseslv tvtvqcaltl
      301 tltaprgadl sslralmsqa lprhaqhaql rwarttwqgg egalgwapls ralqegrarq
      361 rlsrsevstl rscsptqppl rrlfaatetp armgagcpcl gmrrcggpgg trpapgvcsc
      421 sagewaagrp strwwpstsi pprgpriwpc sretpwtsca kvepalpgpg vpnggsahrr
      481 sdmlipavdq awleghcdgr vgifpksfag paarht
//
LOCUS       XP_061010094             507 aa            linear   MAM 02-DEC-2023
DEFINITION  NADPH oxidase activator 1 isoform X4 [Dama dama].
ACCESSION   XP_061010094
VERSION     XP_061010094.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154111.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..507
                     /product="NADPH oxidase activator 1 isoform X4"
                     /calculated_mol_wt=53793
     Region          <12..164
                     /region_name="NlpI"
                     /note="Lipoprotein NlpI, contains TPR repeats [Cell
                     wall/membrane/envelope biogenesis]; COG4785"
                     /db_xref="CDD:443815"
     Site            order(12,15..16,18,39,42..43,46..47,49..50,73,76..77,
                     80..81,84)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          37..67
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          72..100
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          312..388
                     /region_name="PB1"
                     /note="The PB1 domain is a modular domain mediating
                     specific protein-protein interactions which play a role in
                     many critical cell processes, such as osteoclastogenesis,
                     angiogenesis, early cardiovascular development, and cell
                     polarity. A canonical PB1-PB1...; cl02720"
                     /db_xref="CDD:413452"
     Site            order(313,315,319..321,336,384)
                     /site_type="other"
                     /note="PB1 interaction [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(313,315,320..322,336,340,384)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(315,340)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(356,369)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(356,369)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(356,369)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(356,369)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99732"
     Region          <479..502
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
     CDS             1..507
                     /gene="NOXA1"
                     /coded_by="XM_061154111.1:235..1758"
                     /db_xref="GeneID:133064253"
ORIGIN      
        1 mtslgdllrd whqgaqavar gdwdcalrlf ssvsepparv sfnvgcvhll agdpeaalra
       61 fdqavtkdtc lavgflqrgv anfqlerfqe alsdfqrtla qlrdnttidy tqlglrfklq
      121 awevlvnvaa vqsqlglwak aacslgdais kgpegarsdl dialgqvqkq vplqprqvpr
      181 gevfrphrrh lehlepvdfl gkakvlasal aadsqraapl qpqaldacae arpgaaacpr
      241 tpadtemevs sgqagqhdhs tpvtresahg ehagqqvppg llaaggpgpg pseepagsgg
      301 vtsrdseslv tvtvqcaltl tltaprgadl sslralmsqa lprhaqhaql syrdpskdgr
      361 wmplsgdeal rrawrdaagp gglqlqcrvs gvgagaacps pgaeltrhss pcrrewaagr
      421 pstrwwpsts ipprgpriwp csretpwtsc akvepalpgp gvpnggsahr rsdmlipavd
      481 qawleghcdg rvgifpksfa gpaarht
//
LOCUS       XP_061010095             502 aa            linear   MAM 02-DEC-2023
DEFINITION  NADPH oxidase activator 1 isoform X5 [Dama dama].
ACCESSION   XP_061010095
VERSION     XP_061010095.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154112.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..502
                     /product="NADPH oxidase activator 1 isoform X5"
                     /calculated_mol_wt=53174
     Region          <12..164
                     /region_name="NlpI"
                     /note="Lipoprotein NlpI, contains TPR repeats [Cell
                     wall/membrane/envelope biogenesis]; COG4785"
                     /db_xref="CDD:443815"
     Site            order(12,15..16,18,39,42..43,46..47,49..50,73,76..77,
                     80..81,84)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          <14..478
                     /region_name="COG3899"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443106"
     Region          37..67
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          72..100
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          312..388
                     /region_name="PB1"
                     /note="The PB1 domain is a modular domain mediating
                     specific protein-protein interactions which play a role in
                     many critical cell processes, such as osteoclastogenesis,
                     angiogenesis, early cardiovascular development, and cell
                     polarity. A canonical PB1-PB1...; cl02720"
                     /db_xref="CDD:413452"
     Site            order(313,315,319..321,336,384)
                     /site_type="other"
                     /note="PB1 interaction [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(313,315,320..322,336,340,384)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(315,340)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(356,369)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(356,369)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(356,369)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(356,369)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99732"
     CDS             1..502
                     /gene="NOXA1"
                     /coded_by="XM_061154112.1:236..1744"
                     /db_xref="GeneID:133064253"
ORIGIN      
        1 mtslgdllrd whqgaqavar gdwdcalrlf ssvsepparv sfnvgcvhll agdpeaalra
       61 fdqavtkdtc lavgflqrgv anfqlerfqe alsdfqrtla qlrdnttidy tqlglrfklq
      121 awevlvnvaa vqsqlglwak aacslgdais kgpegarsdl dialgqvqkq vplqprqvpr
      181 gevfrphrrh lehlepvdfl gkakvlasal aadsqraapl qpqaldacae arpgaaacpr
      241 tpadtemevs sgqagqhdhs tpvtresahg ehagqqvppg llaaggpgpg pseepagsgg
      301 vtsrdseslv tvtvqcaltl tltaprgadl sslralmsqa lprhaqhaql syrdpskdgr
      361 wmplsgdeal rrawrdaagp gglqlqcrvs gvgagaacps pgaeltrhss pcrrewaagr
      421 pstrwwpsts ipprgpriwp csretpwtsc akwtrhgwra tvmgasassp ralparlrgt
      481 peelggggqg geglikasas hv
//
LOCUS       XP_061010096             500 aa            linear   MAM 02-DEC-2023
DEFINITION  NADPH oxidase activator 1 isoform X6 [Dama dama].
ACCESSION   XP_061010096
VERSION     XP_061010096.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154113.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..500
                     /product="NADPH oxidase activator 1 isoform X6"
                     /calculated_mol_wt=52518
     Region          <12..164
                     /region_name="NlpI"
                     /note="Lipoprotein NlpI, contains TPR repeats [Cell
                     wall/membrane/envelope biogenesis]; COG4785"
                     /db_xref="CDD:443815"
     Site            order(12,15..16,18,39,42..43,46..47,49..50,73,76..77,
                     80..81,84)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          37..67
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          72..100
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          276..>338
                     /region_name="PB1"
                     /note="The PB1 domain is a modular domain mediating
                     specific protein-protein interactions which play a role in
                     many critical cell processes, such as osteoclastogenesis,
                     angiogenesis, early cardiovascular development, and cell
                     polarity. A canonical PB1-PB1...; cl02720"
                     /db_xref="CDD:413452"
     Site            order(277,279,284..286,300,304)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(277,279,283..285,300)
                     /site_type="other"
                     /note="PB1 interaction [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(279,304)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(323,336)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(323,336)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(323,336)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(323,336)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99732"
     Region          <472..495
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
     CDS             1..500
                     /gene="NOXA1"
                     /coded_by="XM_061154113.1:241..1743"
                     /db_xref="GeneID:133064253"
ORIGIN      
        1 mtslgdllrd whqgaqavar gdwdcalrlf ssvsepparv sfnvgcvhll agdpeaalra
       61 fdqavtkdtc lavgflqrgv anfqlerfqe alsdfqrtla qlrdnttidy tqlglrfklq
      121 awevlvnvaa vqsqlglwak aacslgdais kgpegarsdl dialgqvqvl asalaadsqr
      181 aaplqpqald acaearpgaa acprtpadte mevssgqagq hdhstpvtre sahgehagqq
      241 vppgllaagg pgpgpseepa gsggvtsrds eslvtvtvqc altltltapr gadlsslral
      301 msqalprhaq haqlrwartt wqggegalgw aplsralqeg rarqrlsrse vstlrscspt
      361 qpplrrlfaa tetparmgag cpclgmrrcg gpggtrpapg vcscsagewa agrpstrwwp
      421 stsipprgpr iwpcsretpw tscakvepal pgpgvpnggs ahrrsdmlip avdqawlegh
      481 cdgrvgifpk sfagpaarht
//
LOCUS       XP_061010097             455 aa            linear   MAM 02-DEC-2023
DEFINITION  NADPH oxidase activator 1 isoform X7 [Dama dama].
ACCESSION   XP_061010097
VERSION     XP_061010097.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154114.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..455
                     /product="NADPH oxidase activator 1 isoform X7"
                     /calculated_mol_wt=48366
     Region          <12..164
                     /region_name="NlpI"
                     /note="Lipoprotein NlpI, contains TPR repeats [Cell
                     wall/membrane/envelope biogenesis]; COG4785"
                     /db_xref="CDD:443815"
     Site            order(12,15..16,18,39,42..43,46..47,49..50,73,76..77,
                     80..81,84)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          37..67
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          72..100
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          312..388
                     /region_name="PB1"
                     /note="The PB1 domain is a modular domain mediating
                     specific protein-protein interactions which play a role in
                     many critical cell processes, such as osteoclastogenesis,
                     angiogenesis, early cardiovascular development, and cell
                     polarity. A canonical PB1-PB1...; cl02720"
                     /db_xref="CDD:413452"
     Site            order(313,315,319..321,336,384)
                     /site_type="other"
                     /note="PB1 interaction [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(313,315,320..322,336,340,384)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(315,340)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(356,369)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(356,369)
                     /site_type="other"
                     /note="PB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(356,369)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(356,369)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99732"
     Region          398..450
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
     Site            order(403,405,408,412,430..431,444,446..447)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212980"
     CDS             1..455
                     /gene="NOXA1"
                     /coded_by="XM_061154114.1:234..1601"
                     /db_xref="GeneID:133064253"
ORIGIN      
        1 mtslgdllrd whqgaqavar gdwdcalrlf ssvsepparv sfnvgcvhll agdpeaalra
       61 fdqavtkdtc lavgflqrgv anfqlerfqe alsdfqrtla qlrdnttidy tqlglrfklq
      121 awevlvnvaa vqsqlglwak aacslgdais kgpegarsdl dialgqvqkq vplqprqvpr
      181 gevfrphrrh lehlepvdfl gkakvlasal aadsqraapl qpqaldacae arpgaaacpr
      241 tpadtemevs sgqagqhdhs tpvtresahg ehagqqvppg llaaggpgpg pseepagsgg
      301 vtsrdseslv tvtvqcaltl tltaprgadl sslralmsqa lprhaqhaql syrdpskdgr
      361 wmplsgdeal rrawrdaagp gglqlqcrgv ggrpalyqvv aqhvysaqrp edlalqpgdt
      421 vdvlcevdqa wleghcdgrv gifpksfagp aarht
//
LOCUS       XP_061010098             444 aa            linear   MAM 02-DEC-2023
DEFINITION  NADPH oxidase activator 1 isoform X8 [Dama dama].
ACCESSION   XP_061010098
VERSION     XP_061010098.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154115.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..444
                     /product="NADPH oxidase activator 1 isoform X8"
                     /calculated_mol_wt=47187
     Region          <12..164
                     /region_name="NlpI"
                     /note="Lipoprotein NlpI, contains TPR repeats [Cell
                     wall/membrane/envelope biogenesis]; COG4785"
                     /db_xref="CDD:443815"
     Site            order(12,15..16,18,39,42..43,46..47,49..50,73,76..77,
                     80..81,84)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          37..67
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          72..100
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          312..>350
                     /region_name="PB1"
                     /note="The PB1 domain is a modular domain mediating
                     specific protein-protein interactions which play a role in
                     many critical cell processes, such as osteoclastogenesis,
                     angiogenesis, early cardiovascular development, and cell
                     polarity. A canonical PB1-PB1...; cl02720"
                     /db_xref="CDD:413452"
     Site            order(313,315,320..322,336,340)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(313,315,319..321,336)
                     /site_type="other"
                     /note="PB1 interaction [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(315,340)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99732"
     Region          <416..439
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
     CDS             1..444
                     /gene="NOXA1"
                     /coded_by="XM_061154115.1:237..1571"
                     /db_xref="GeneID:133064253"
ORIGIN      
        1 mtslgdllrd whqgaqavar gdwdcalrlf ssvsepparv sfnvgcvhll agdpeaalra
       61 fdqavtkdtc lavgflqrgv anfqlerfqe alsdfqrtla qlrdnttidy tqlglrfklq
      121 awevlvnvaa vqsqlglwak aacslgdais kgpegarsdl dialgqvqkq vplqprqvpr
      181 gevfrphrrh lehlepvdfl gkakvlasal aadsqraapl qpqaldacae arpgaaacpr
      241 tpadtemevs sgqagqhdhs tpvtresahg ehagqqvppg llaaggpgpg pseepagsgg
      301 vtsrdseslv tvtvqcaltl tltaprgadl sslralmsqa lprhaqhaql rewaagrpst
      361 rwwpstsipp rgpriwpcsr etpwtscakv epalpgpgvp nggsahrrsd mlipavdqaw
      421 leghcdgrvg ifpksfagpa arht
//
LOCUS       XP_061010099             439 aa            linear   MAM 02-DEC-2023
DEFINITION  NADPH oxidase activator 1 isoform X9 [Dama dama].
ACCESSION   XP_061010099
VERSION     XP_061010099.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154116.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..439
                     /product="NADPH oxidase activator 1 isoform X9"
                     /calculated_mol_wt=46569
     Region          <12..164
                     /region_name="NlpI"
                     /note="Lipoprotein NlpI, contains TPR repeats [Cell
                     wall/membrane/envelope biogenesis]; COG4785"
                     /db_xref="CDD:443815"
     Site            order(12,15..16,18,39,42..43,46..47,49..50,73,76..77,
                     80..81,84)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          <14..415
                     /region_name="COG3899"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443106"
     Region          37..67
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          72..100
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          312..>350
                     /region_name="PB1"
                     /note="The PB1 domain is a modular domain mediating
                     specific protein-protein interactions which play a role in
                     many critical cell processes, such as osteoclastogenesis,
                     angiogenesis, early cardiovascular development, and cell
                     polarity. A canonical PB1-PB1...; cl02720"
                     /db_xref="CDD:413452"
     Site            order(313,315,320..322,336,340)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(313,315,319..321,336)
                     /site_type="other"
                     /note="PB1 interaction [polypeptide binding]"
                     /db_xref="CDD:99732"
     Site            order(315,340)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99732"
     CDS             1..439
                     /gene="NOXA1"
                     /coded_by="XM_061154116.1:237..1556"
                     /db_xref="GeneID:133064253"
ORIGIN      
        1 mtslgdllrd whqgaqavar gdwdcalrlf ssvsepparv sfnvgcvhll agdpeaalra
       61 fdqavtkdtc lavgflqrgv anfqlerfqe alsdfqrtla qlrdnttidy tqlglrfklq
      121 awevlvnvaa vqsqlglwak aacslgdais kgpegarsdl dialgqvqkq vplqprqvpr
      181 gevfrphrrh lehlepvdfl gkakvlasal aadsqraapl qpqaldacae arpgaaacpr
      241 tpadtemevs sgqagqhdhs tpvtresahg ehagqqvppg llaaggpgpg pseepagsgg
      301 vtsrdseslv tvtvqcaltl tltaprgadl sslralmsqa lprhaqhaql rewaagrpst
      361 rwwpstsipp rgpriwpcsr etpwtscakw trhgwratvm gasasspral parlrgtpee
      421 lggggqggeg likasashv
//
LOCUS       XP_061010100             905 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: catenin alpha-1-like [Dama dama].
ACCESSION   XP_061010100
VERSION     XP_061010100.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154117.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..905
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..905
                     /product="LOW QUALITY PROTEIN: catenin alpha-1-like"
                     /calculated_mol_wt=99930
     Region          19..866
                     /region_name="Vinculin"
                     /note="Vinculin family; pfam01044"
                     /db_xref="CDD:460040"
     CDS             1..905
                     /gene="LOC133064254"
                     /coded_by="XM_061154117.1:14..2731"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon"
                     /db_xref="GeneID:133064254"
ORIGIN      
        1 mtavhtgnin fkwdpkslei rtlaverlle plvtqvttlv ntnskgpsnk krgrskrahv
       61 laasveqate nflekgdkia kesqflkeel vaavedvrkq gdlmksdage faddpcssvk
      121 rgnmvqaara llsavtrlli ladmadvykl lvqlklvedg ilklrnagte qdlgiqykal
      181 kpevdklnim aakrqqelkd vghrdqmaaa rgilqknvpi lytasqaclq hpdvaaykan
      241 rdliykqlqq avtgisnaaq atasddasqh qggggelaya lnnfdkqiiv dplsfseerf
      301 rpsleerles iisgaalmad ssctrddrre rivaxcnavr qalqdllsey mgnagrkers
      361 dalnsaidkm tkktrdlrrq lrkavmdhvs dsfletnipl lvlieaakng nekevkeyaq
      421 vfrehankli evansacsis nneegvklvr msasqlealc pqvinaalal aakpqsklaq
      481 enmdlfkeqw ekqvrvltda vdditsiddf lavsenhile dvnkcvialq ekdvdgldrt
      541 agairgraar vthvvtsemd nyepgvytek vleatkllsn tvmprfteqv eaavealssd
      601 paqpmdesef idasrlvhdg irdirkamlm irtpeeldds dfetedfdvr srtsvqtedd
      661 qliagqsara imaqlpqeqk akiaeqvasf qeekskldae vskwddsgnd iivlakqmcm
      721 immemtdftr gkgplkntsd visaakkiae agsrmdklgr tiadhcpdsa ckqdllaylq
      781 rialychqln icskvkaevq nlggelvvsg vdsamsliqa aknlmnavvq tvkasyvast
      841 kyqksqrmas lnlpavswkm kapekkplvk rekqdemqtk ikrasqkkhv npvqalsefk
      901 amdsi
//
LOCUS       XP_061010101             406 aa            linear   MAM 02-DEC-2023
DEFINITION  torsin-4A [Dama dama].
ACCESSION   XP_061010101
VERSION     XP_061010101.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154118.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..406
                     /product="torsin-4A"
                     /calculated_mol_wt=44758
     Region          138..242
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            183..190
                     /site_type="other"
                     /note="Walker A motif"
                     /db_xref="CDD:99707"
     Site            order(184..191,255)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:99707"
     Site            251..256
                     /site_type="other"
                     /note="Walker B motif"
                     /db_xref="CDD:99707"
     CDS             1..406
                     /gene="TOR4A"
                     /coded_by="XM_061154118.1:386..1606"
                     /db_xref="GeneID:133064255"
ORIGIN      
        1 mdrgqsspep aapvapspsv iapvravvrl rhqvrllrkr rppppavepe pgaaaprvlr
       61 eqpqfftfdg paelvsrpar krrrrsrlvl ypetsrkfgp raerhsraqr cllllvaivg
      121 fqvlnaienl ddnalrydld glektlqrav fgqpaamgrl vallrdylat hvhsrpllla
      181 lhgpsgvgks hvgrllarhf ravledgalv lqyharhhcp apraaagcre elarrvadvl
      241 araeaeektp llvlddaell ppalldelhg llqpqrpprf hnavyvllsg aggaevtrfv
      301 lqnasrsgha egpeelraae eelrgslral lirqhplwea aaivpfllld krdvvncfrd
      361 emagegffpe qaraellaaq lsyyrvagre favtgckqvv atvnll
//
LOCUS       XP_061010102             445 aa            linear   MAM 02-DEC-2023
DEFINITION  tubulin beta-4B chain [Dama dama].
ACCESSION   XP_061010102
VERSION     XP_061010102.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154119.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..445
                     /product="tubulin beta-4B chain"
                     /calculated_mol_wt=49700
     Region          1..427
                     /region_name="PLN00220"
                     /note="tubulin beta chain; Provisional"
                     /db_xref="CDD:215107"
     CDS             1..445
                     /gene="TUBB4B"
                     /coded_by="XM_061154119.1:103..1440"
                     /db_xref="GeneID:133064256"
ORIGIN      
        1 mreivhlqag qcgnqigakf wevisdehgi dptgtyhgds dlqlerinvy yneatggkyv
       61 pravlvdlep gtmdsvrsgp fgqifrpdnf vfgqsgagnn wakghytega elvdsvldvv
      121 rkeaescdcl qgfqlthslg ggtgsgmgtl liskireeyp drimntfsvv pspkvsdtvv
      181 epynatlsvh qlventdety cidnealydi cfrtlklttp tygdlnhlvs atmsgvttcl
      241 rfpgqlnadl rklavnmvpf prlhffmpgf apltsrgsqq yraltvpelt qqmfdaknmm
      301 aacdprhgry ltvaavfrgr msmkevdeqm lnvqnknssy fvewipnnvk tavcdipprg
      361 lkmsatfign staiqelfkr iseqftamfr rkaflhwytg egmdemefte aesnmndlvs
      421 eyqqyqdata eeegefeeea eeeva
//
LOCUS       XP_061010103             320 aa            linear   MAM 02-DEC-2023
DEFINITION  ciliary microtubule inner protein 2A [Dama dama].
ACCESSION   XP_061010103
VERSION     XP_061010103.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154120.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..320
                     /product="ciliary microtubule inner protein 2A"
                     /calculated_mol_wt=36091
     Region          13..>45
                     /region_name="DUF2475"
                     /note="Protein of unknown function (DUF2475); pfam10629"
                     /db_xref="CDD:431404"
     CDS             1..320
                     /gene="CIMIP2A"
                     /coded_by="XM_061154120.1:1..963"
                     /db_xref="GeneID:133064258"
ORIGIN      
        1 mtatqkhslf spephyipgy agfypqlryq vgntygrtta qlltdpsvqk spcsvlapia
       61 kpkfiedfsk pkppfvpcrd liepyiphyt glkpyknfem lgrfppqevd aqgslggenv
      121 srqeplpagf mpyppyapcp pgreggsrdl ghpglrlalg eeawksitpa ceapgqyqly
      181 hcrrdrsppl ahwqetldvg rfhrlpqldh pnliqrkais gyagfvprfa wvmgmnyrdg
      241 vtqamdefdk sqfllrnpic algerlpqth wpsntiyrsq glipfymgfi psmqdnyalt
      301 fgnstrkayg kelerrsqtl
//
LOCUS       XP_061010104            2420 aa            linear   MAM 02-DEC-2023
DEFINITION  ATP-binding cassette sub-family A member 2 [Dama dama].
ACCESSION   XP_061010104
VERSION     XP_061010104.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154121.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2420
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2420
                     /product="ATP-binding cassette sub-family A member 2"
                     /calculated_mol_wt=268065
     Region          1..2352
                     /region_name="rim_protein"
                     /note="retinal-specific rim ABC transporter; TIGR01257"
                     /db_xref="CDD:130324"
     CDS             1..2420
                     /gene="ABCA2"
                     /coded_by="XM_061154121.1:36..7298"
                     /db_xref="GeneID:133064259"
ORIGIN      
        1 mgflhqlqll lwknvtlkrr spwvlafeif iplvlffill glrqkkptis vkeafytaap
       61 ltsagilpvm qslcpdgqrd efgflqyans tvtqllerln rvveegnlfd parpslgsel
      121 evlrqhleal sagpdpwdgp aarpavssfs ldsvardrre lrrfltqnls lpdsaarall
      181 aaqvdlpevy rllfgpspgl dggsgpprnq qplfrmeell lapalleqlt cmpgsrelgr
      241 vltvprgqqt alqgyrdtvc rgqavarahr fselaaelrn qldaakiaqq lglngpngsa
      301 apqqpppppr lqalledlld aqkvlrdvdv lsalalllpq gacagrapgp aasgpggaan
      361 stgagagpss nstaeegaps aaapapsdal qgqcsafvql waglqpilcg nnrtiepeal
      421 rrgnmsslgf tskeqrnlgl lvhlmtsnpk ilyapagsea drvilkanet falvgnvthy
      481 aqvwlnisae irgyleqgrl qqhlrwlqqy vaelrlhpea lrlspeelpp alrqdnfslp
      541 ngsvllqqld tidnaacgwi qfmskvsvdi fkgfpdeesi vnytlnqayq dnvtvfasvi
      601 fqtrkdgslp phvhykirqn ssftektnei rraywrpgpn tggrfyflyg fvwiqdmmer
      661 aiidtfvghd vvepgnyvqm fpypcytrdd flfviehmmp lcmviswvys vamtiqhiva
      721 ekehrlkevm ktmglnnavh wvawfitgfv qlsisvtalt ailkygqvla hshvliiwlf
      781 lavyavatim fcflvsvlys kaklasacgg iiyflsyvpy myvaireeva hdkitafekc
      841 iaslmsttaf glgskyfaly evagvgiqwh tfsqspvegd dfnlllavtm lmvdavvygv
      901 ltwyieavhp gmyglprpwy fplqksywlg sgrteawewn wpwaraprls vmeedqacam
      961 esrrleetrg meeepthlpl vvcvdkltkv ykndkklaln klslnlyenq vvsflghnga
     1021 gktttmsilt glfpptsgsa tiyghdirte mdeirknlgm cpqhnvlfdr ltveehlwfy
     1081 srlksmaqee irkemdkmie dlelsnkrhs lvqtlsggmk rklsvaiafv ggsraiilde
     1141 ptagvdpyar raiwdlilky kpgrtillst hhmdeadllg driaiishgk lkccgsplfl
     1201 kgaygdgyrl tlvkrpaepg gpqepgltas ppgpaqlssc sesqvsqfir khvascllvs
     1261 dtstelsyil pseaakkgaf erlfqhlehs ldalhlssfg lmdttleevf lkvseedqsl
     1321 enseadvkes rkdvlpgaad pvsgegpagn larcaelaqs qaslqsassv gsargdegag
     1381 ytdvygdyrp lcdnlqdpdn vslqeaeaet larvgqgsrk legwwlkvrq fhgllvkrfh
     1441 carrnskals sqillpaffv cvamtvalsv peigdlpplv lspsqyhnyt qprgnfipya
     1501 neerreyrlr lspdagpqql vgtfrlpsgv gatcvlkspa ngslgstlnl ssgesrllaa
     1561 rffdsmcles ftqglplsnf vppppspaps dspvtldedl lptsgpenwt sapslphlvr
     1621 epvrctcsgq gtgfscpggv gghppqmrvv tgdiltditg hnvseyllft sdrfrlhryg
     1681 aitfgnvqks ipasfgarap amvrriavrr aaqvfynnkg yhsmptylns lnnailranl
     1741 pkgkgnpaay gitvtnhpmn ktsaslsldy llqgtdvvia ifiivamsfv pasfvvflva
     1801 ekstkakhlq fvsgcnpiiy wlanyvwdml nylvpatccv lilfvfdlpa ytsptnfpav
     1861 lslfllygws itpimypasf wfevpssayv flivinlfig itatvatfll qlfehdkdlk
     1921 vvnsylkscf lifpnynlgh glmemayney ineyyakigq vdkmkspfew divtrglvam
     1981 tvegfvgfll timcqynflr qpqrmpvstk pveddvdvas erqrvlrgda dndmvkienl
     2041 tkvyksrkig rilavdrlcl gvrpgecfgl lgvngagkts tfkmltgdes ttggeafvng
     2101 hsvlkdllqv qqslgycpqf dalfdeltar ehlqlytrlr giawkdearv vkwaleklel
     2161 tkyadkpagt ysggnkrkls taialigypa fifldepttg mdpkarrflw nlildliktg
     2221 rsvvltshsm eecealctrl aimvngrlrc lgsiqhlknr fgdgymitvr tkssqnvkdv
     2281 mrffnrnfpe avlkerhhtk vqyqlksehi slaqvfskme qvvgvlgved ysvsqttldn
     2341 vfvnfakkqs dnleqqetep psglqsplgr llslfrprpp ptelralvad epedldtede
     2401 glisfeeera qlsfntdtlc
//
LOCUS       XP_061010105            2420 aa            linear   MAM 02-DEC-2023
DEFINITION  ATP-binding cassette sub-family A member 2 [Dama dama].
ACCESSION   XP_061010105
VERSION     XP_061010105.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154122.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2420
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2420
                     /product="ATP-binding cassette sub-family A member 2"
                     /calculated_mol_wt=268065
     Region          1..2352
                     /region_name="rim_protein"
                     /note="retinal-specific rim ABC transporter; TIGR01257"
                     /db_xref="CDD:130324"
     CDS             1..2420
                     /gene="ABCA2"
                     /coded_by="XM_061154122.1:54..7316"
                     /db_xref="GeneID:133064259"
ORIGIN      
        1 mgflhqlqll lwknvtlkrr spwvlafeif iplvlffill glrqkkptis vkeafytaap
       61 ltsagilpvm qslcpdgqrd efgflqyans tvtqllerln rvveegnlfd parpslgsel
      121 evlrqhleal sagpdpwdgp aarpavssfs ldsvardrre lrrfltqnls lpdsaarall
      181 aaqvdlpevy rllfgpspgl dggsgpprnq qplfrmeell lapalleqlt cmpgsrelgr
      241 vltvprgqqt alqgyrdtvc rgqavarahr fselaaelrn qldaakiaqq lglngpngsa
      301 apqqpppppr lqalledlld aqkvlrdvdv lsalalllpq gacagrapgp aasgpggaan
      361 stgagagpss nstaeegaps aaapapsdal qgqcsafvql waglqpilcg nnrtiepeal
      421 rrgnmsslgf tskeqrnlgl lvhlmtsnpk ilyapagsea drvilkanet falvgnvthy
      481 aqvwlnisae irgyleqgrl qqhlrwlqqy vaelrlhpea lrlspeelpp alrqdnfslp
      541 ngsvllqqld tidnaacgwi qfmskvsvdi fkgfpdeesi vnytlnqayq dnvtvfasvi
      601 fqtrkdgslp phvhykirqn ssftektnei rraywrpgpn tggrfyflyg fvwiqdmmer
      661 aiidtfvghd vvepgnyvqm fpypcytrdd flfviehmmp lcmviswvys vamtiqhiva
      721 ekehrlkevm ktmglnnavh wvawfitgfv qlsisvtalt ailkygqvla hshvliiwlf
      781 lavyavatim fcflvsvlys kaklasacgg iiyflsyvpy myvaireeva hdkitafekc
      841 iaslmsttaf glgskyfaly evagvgiqwh tfsqspvegd dfnlllavtm lmvdavvygv
      901 ltwyieavhp gmyglprpwy fplqksywlg sgrteawewn wpwaraprls vmeedqacam
      961 esrrleetrg meeepthlpl vvcvdkltkv ykndkklaln klslnlyenq vvsflghnga
     1021 gktttmsilt glfpptsgsa tiyghdirte mdeirknlgm cpqhnvlfdr ltveehlwfy
     1081 srlksmaqee irkemdkmie dlelsnkrhs lvqtlsggmk rklsvaiafv ggsraiilde
     1141 ptagvdpyar raiwdlilky kpgrtillst hhmdeadllg driaiishgk lkccgsplfl
     1201 kgaygdgyrl tlvkrpaepg gpqepgltas ppgpaqlssc sesqvsqfir khvascllvs
     1261 dtstelsyil pseaakkgaf erlfqhlehs ldalhlssfg lmdttleevf lkvseedqsl
     1321 enseadvkes rkdvlpgaad pvsgegpagn larcaelaqs qaslqsassv gsargdegag
     1381 ytdvygdyrp lcdnlqdpdn vslqeaeaet larvgqgsrk legwwlkvrq fhgllvkrfh
     1441 carrnskals sqillpaffv cvamtvalsv peigdlpplv lspsqyhnyt qprgnfipya
     1501 neerreyrlr lspdagpqql vgtfrlpsgv gatcvlkspa ngslgstlnl ssgesrllaa
     1561 rffdsmcles ftqglplsnf vppppspaps dspvtldedl lptsgpenwt sapslphlvr
     1621 epvrctcsgq gtgfscpggv gghppqmrvv tgdiltditg hnvseyllft sdrfrlhryg
     1681 aitfgnvqks ipasfgarap amvrriavrr aaqvfynnkg yhsmptylns lnnailranl
     1741 pkgkgnpaay gitvtnhpmn ktsaslsldy llqgtdvvia ifiivamsfv pasfvvflva
     1801 ekstkakhlq fvsgcnpiiy wlanyvwdml nylvpatccv lilfvfdlpa ytsptnfpav
     1861 lslfllygws itpimypasf wfevpssayv flivinlfig itatvatfll qlfehdkdlk
     1921 vvnsylkscf lifpnynlgh glmemayney ineyyakigq vdkmkspfew divtrglvam
     1981 tvegfvgfll timcqynflr qpqrmpvstk pveddvdvas erqrvlrgda dndmvkienl
     2041 tkvyksrkig rilavdrlcl gvrpgecfgl lgvngagkts tfkmltgdes ttggeafvng
     2101 hsvlkdllqv qqslgycpqf dalfdeltar ehlqlytrlr giawkdearv vkwaleklel
     2161 tkyadkpagt ysggnkrkls taialigypa fifldepttg mdpkarrflw nlildliktg
     2221 rsvvltshsm eecealctrl aimvngrlrc lgsiqhlknr fgdgymitvr tkssqnvkdv
     2281 mrffnrnfpe avlkerhhtk vqyqlksehi slaqvfskme qvvgvlgved ysvsqttldn
     2341 vfvnfakkqs dnleqqetep psglqsplgr llslfrprpp ptelralvad epedldtede
     2401 glisfeeera qlsfntdtlc
//
LOCUS       XP_061010107            1165 aa            linear   MAM 02-DEC-2023
DEFINITION  protein phosphatase 1 regulatory subunit 26 [Dama dama].
ACCESSION   XP_061010107
VERSION     XP_061010107.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154124.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1165
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1165
                     /product="protein phosphatase 1 regulatory subunit 26"
                     /calculated_mol_wt=120900
     Region          1..807
                     /region_name="PPP1R26_N"
                     /note="Protein phosphatase 1 regulatory subunit 26
                     N-terminus; pfam15740"
                     /db_xref="CDD:464836"
     CDS             1..1165
                     /gene="PPP1R26"
                     /coded_by="XM_061154124.1:1888..5385"
                     /db_xref="GeneID:133064260"
ORIGIN      
        1 mflmnappvl alrsaweafg ppgscrfprc fsepregvsr aavsakvqma isrlqgdgaa
       61 lgmsgeharp rsqraergrg appaaspafa acglaagldp kgeeeeasnl gplvpgsdsd
      121 dsvdrdieea iqeylraksg aapppaagdv ahrcrpeppl sgapaapcpp npaagpgrvr
      181 gsasplsvss ddsfeqsiqa eieqflsekr lqkgdlpacr kaepgdsmar atcrpgrepp
      241 lkapqqglpg agkefvfrkl prsakasalr rglrckvaaa epaaaatmgp paeatpgkag
      301 vrramgsark grrprgaalv reepdsssdd gieeairlyq rerrqeavgq qgppsaeekg
      361 pmapahglrg awpeahsktp gkkkpaapka tdlglggpdh dhpprppret tapappgsaa
      421 agtpgmdgsp hqadasaelm caeaildisk tilpapvdgg erppptspll egpdgpprpd
      481 gdssavdsdd siereirtfl alkaqsggpl prtetcarpa hsppllpsls apasstpdps
      541 pgcrrrrgrt pctprqprdt aetqdaqdae rgqgrvqpgq grapeaprke gesrsqpppf
      601 ktggpgdelg apdppgaapp gpgqmaegrr gdasseekss sldsdadlds aikdllrskr
      661 rlrkrcrdar agckkrvrfs ttetqfldkl ggfqkdwrdr sphllksclc kssretpgrp
      721 srvpsretag akadgsgped apsgpsapwp rgraaagglf sreseacepp gpsespssls
      781 ddsssvdsdd sieleirkfl aekakesvsr seipggglai lgtasgarpe lpgrkaqppg
      841 paaqagmctr sqrvrggpqp gaegprrpgr altpggggsp hpeqpcppat lawcelappr
      901 stsrpaparg apaprrnvca prdsgprgpe gvagegtfgq lpsrveagaw aegrgllart
      961 lgserdgvpr aglapqsrlq stwvlgpesr daaawrgglg gqrekgpgsq aqgspslavd
     1021 prrglpftgf spllstqlfh fgkcvpwgtk qaglfspslg lplqgpsfsa freaqaargp
     1081 vfgsprllvk eggrwpcrkp raglglsnrr gsgpeegvld lhfghrgldr deeepealgs
     1141 daselsdvsv eegggpaaqg palql
//
LOCUS       XP_061010108            1165 aa            linear   MAM 02-DEC-2023
DEFINITION  protein phosphatase 1 regulatory subunit 26 [Dama dama].
ACCESSION   XP_061010108
VERSION     XP_061010108.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154125.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1165
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1165
                     /product="protein phosphatase 1 regulatory subunit 26"
                     /calculated_mol_wt=120900
     Region          1..807
                     /region_name="PPP1R26_N"
                     /note="Protein phosphatase 1 regulatory subunit 26
                     N-terminus; pfam15740"
                     /db_xref="CDD:464836"
     CDS             1..1165
                     /gene="PPP1R26"
                     /coded_by="XM_061154125.1:641..4138"
                     /db_xref="GeneID:133064260"
ORIGIN      
        1 mflmnappvl alrsaweafg ppgscrfprc fsepregvsr aavsakvqma isrlqgdgaa
       61 lgmsgeharp rsqraergrg appaaspafa acglaagldp kgeeeeasnl gplvpgsdsd
      121 dsvdrdieea iqeylraksg aapppaagdv ahrcrpeppl sgapaapcpp npaagpgrvr
      181 gsasplsvss ddsfeqsiqa eieqflsekr lqkgdlpacr kaepgdsmar atcrpgrepp
      241 lkapqqglpg agkefvfrkl prsakasalr rglrckvaaa epaaaatmgp paeatpgkag
      301 vrramgsark grrprgaalv reepdsssdd gieeairlyq rerrqeavgq qgppsaeekg
      361 pmapahglrg awpeahsktp gkkkpaapka tdlglggpdh dhpprppret tapappgsaa
      421 agtpgmdgsp hqadasaelm caeaildisk tilpapvdgg erppptspll egpdgpprpd
      481 gdssavdsdd siereirtfl alkaqsggpl prtetcarpa hsppllpsls apasstpdps
      541 pgcrrrrgrt pctprqprdt aetqdaqdae rgqgrvqpgq grapeaprke gesrsqpppf
      601 ktggpgdelg apdppgaapp gpgqmaegrr gdasseekss sldsdadlds aikdllrskr
      661 rlrkrcrdar agckkrvrfs ttetqfldkl ggfqkdwrdr sphllksclc kssretpgrp
      721 srvpsretag akadgsgped apsgpsapwp rgraaagglf sreseacepp gpsespssls
      781 ddsssvdsdd sieleirkfl aekakesvsr seipggglai lgtasgarpe lpgrkaqppg
      841 paaqagmctr sqrvrggpqp gaegprrpgr altpggggsp hpeqpcppat lawcelappr
      901 stsrpaparg apaprrnvca prdsgprgpe gvagegtfgq lpsrveagaw aegrgllart
      961 lgserdgvpr aglapqsrlq stwvlgpesr daaawrgglg gqrekgpgsq aqgspslavd
     1021 prrglpftgf spllstqlfh fgkcvpwgtk qaglfspslg lplqgpsfsa freaqaargp
     1081 vfgsprllvk eggrwpcrkp raglglsnrr gsgpeegvld lhfghrgldr deeepealgs
     1141 daselsdvsv eegggpaaqg palql
//
LOCUS       XP_061010109            1165 aa            linear   MAM 02-DEC-2023
DEFINITION  protein phosphatase 1 regulatory subunit 26 [Dama dama].
ACCESSION   XP_061010109
VERSION     XP_061010109.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154126.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1165
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1165
                     /product="protein phosphatase 1 regulatory subunit 26"
                     /calculated_mol_wt=120900
     Region          1..807
                     /region_name="PPP1R26_N"
                     /note="Protein phosphatase 1 regulatory subunit 26
                     N-terminus; pfam15740"
                     /db_xref="CDD:464836"
     CDS             1..1165
                     /gene="PPP1R26"
                     /coded_by="XM_061154126.1:620..4117"
                     /db_xref="GeneID:133064260"
ORIGIN      
        1 mflmnappvl alrsaweafg ppgscrfprc fsepregvsr aavsakvqma isrlqgdgaa
       61 lgmsgeharp rsqraergrg appaaspafa acglaagldp kgeeeeasnl gplvpgsdsd
      121 dsvdrdieea iqeylraksg aapppaagdv ahrcrpeppl sgapaapcpp npaagpgrvr
      181 gsasplsvss ddsfeqsiqa eieqflsekr lqkgdlpacr kaepgdsmar atcrpgrepp
      241 lkapqqglpg agkefvfrkl prsakasalr rglrckvaaa epaaaatmgp paeatpgkag
      301 vrramgsark grrprgaalv reepdsssdd gieeairlyq rerrqeavgq qgppsaeekg
      361 pmapahglrg awpeahsktp gkkkpaapka tdlglggpdh dhpprppret tapappgsaa
      421 agtpgmdgsp hqadasaelm caeaildisk tilpapvdgg erppptspll egpdgpprpd
      481 gdssavdsdd siereirtfl alkaqsggpl prtetcarpa hsppllpsls apasstpdps
      541 pgcrrrrgrt pctprqprdt aetqdaqdae rgqgrvqpgq grapeaprke gesrsqpppf
      601 ktggpgdelg apdppgaapp gpgqmaegrr gdasseekss sldsdadlds aikdllrskr
      661 rlrkrcrdar agckkrvrfs ttetqfldkl ggfqkdwrdr sphllksclc kssretpgrp
      721 srvpsretag akadgsgped apsgpsapwp rgraaagglf sreseacepp gpsespssls
      781 ddsssvdsdd sieleirkfl aekakesvsr seipggglai lgtasgarpe lpgrkaqppg
      841 paaqagmctr sqrvrggpqp gaegprrpgr altpggggsp hpeqpcppat lawcelappr
      901 stsrpaparg apaprrnvca prdsgprgpe gvagegtfgq lpsrveagaw aegrgllart
      961 lgserdgvpr aglapqsrlq stwvlgpesr daaawrgglg gqrekgpgsq aqgspslavd
     1021 prrglpftgf spllstqlfh fgkcvpwgtk qaglfspslg lplqgpsfsa freaqaargp
     1081 vfgsprllvk eggrwpcrkp raglglsnrr gsgpeegvld lhfghrgldr deeepealgs
     1141 daselsdvsv eegggpaaqg palql
//
LOCUS       XP_061010110            1165 aa            linear   MAM 02-DEC-2023
DEFINITION  protein phosphatase 1 regulatory subunit 26 [Dama dama].
ACCESSION   XP_061010110
VERSION     XP_061010110.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154127.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1165
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1165
                     /product="protein phosphatase 1 regulatory subunit 26"
                     /calculated_mol_wt=120900
     Region          1..807
                     /region_name="PPP1R26_N"
                     /note="Protein phosphatase 1 regulatory subunit 26
                     N-terminus; pfam15740"
                     /db_xref="CDD:464836"
     CDS             1..1165
                     /gene="PPP1R26"
                     /coded_by="XM_061154127.1:603..4100"
                     /db_xref="GeneID:133064260"
ORIGIN      
        1 mflmnappvl alrsaweafg ppgscrfprc fsepregvsr aavsakvqma isrlqgdgaa
       61 lgmsgeharp rsqraergrg appaaspafa acglaagldp kgeeeeasnl gplvpgsdsd
      121 dsvdrdieea iqeylraksg aapppaagdv ahrcrpeppl sgapaapcpp npaagpgrvr
      181 gsasplsvss ddsfeqsiqa eieqflsekr lqkgdlpacr kaepgdsmar atcrpgrepp
      241 lkapqqglpg agkefvfrkl prsakasalr rglrckvaaa epaaaatmgp paeatpgkag
      301 vrramgsark grrprgaalv reepdsssdd gieeairlyq rerrqeavgq qgppsaeekg
      361 pmapahglrg awpeahsktp gkkkpaapka tdlglggpdh dhpprppret tapappgsaa
      421 agtpgmdgsp hqadasaelm caeaildisk tilpapvdgg erppptspll egpdgpprpd
      481 gdssavdsdd siereirtfl alkaqsggpl prtetcarpa hsppllpsls apasstpdps
      541 pgcrrrrgrt pctprqprdt aetqdaqdae rgqgrvqpgq grapeaprke gesrsqpppf
      601 ktggpgdelg apdppgaapp gpgqmaegrr gdasseekss sldsdadlds aikdllrskr
      661 rlrkrcrdar agckkrvrfs ttetqfldkl ggfqkdwrdr sphllksclc kssretpgrp
      721 srvpsretag akadgsgped apsgpsapwp rgraaagglf sreseacepp gpsespssls
      781 ddsssvdsdd sieleirkfl aekakesvsr seipggglai lgtasgarpe lpgrkaqppg
      841 paaqagmctr sqrvrggpqp gaegprrpgr altpggggsp hpeqpcppat lawcelappr
      901 stsrpaparg apaprrnvca prdsgprgpe gvagegtfgq lpsrveagaw aegrgllart
      961 lgserdgvpr aglapqsrlq stwvlgpesr daaawrgglg gqrekgpgsq aqgspslavd
     1021 prrglpftgf spllstqlfh fgkcvpwgtk qaglfspslg lplqgpsfsa freaqaargp
     1081 vfgsprllvk eggrwpcrkp raglglsnrr gsgpeegvld lhfghrgldr deeepealgs
     1141 daselsdvsv eegggpaaqg palql
//
LOCUS       XP_061010111            1165 aa            linear   MAM 02-DEC-2023
DEFINITION  protein phosphatase 1 regulatory subunit 26 [Dama dama].
ACCESSION   XP_061010111
VERSION     XP_061010111.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154128.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1165
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1165
                     /product="protein phosphatase 1 regulatory subunit 26"
                     /calculated_mol_wt=120900
     Region          1..807
                     /region_name="PPP1R26_N"
                     /note="Protein phosphatase 1 regulatory subunit 26
                     N-terminus; pfam15740"
                     /db_xref="CDD:464836"
     CDS             1..1165
                     /gene="PPP1R26"
                     /coded_by="XM_061154128.1:991..4488"
                     /db_xref="GeneID:133064260"
ORIGIN      
        1 mflmnappvl alrsaweafg ppgscrfprc fsepregvsr aavsakvqma isrlqgdgaa
       61 lgmsgeharp rsqraergrg appaaspafa acglaagldp kgeeeeasnl gplvpgsdsd
      121 dsvdrdieea iqeylraksg aapppaagdv ahrcrpeppl sgapaapcpp npaagpgrvr
      181 gsasplsvss ddsfeqsiqa eieqflsekr lqkgdlpacr kaepgdsmar atcrpgrepp
      241 lkapqqglpg agkefvfrkl prsakasalr rglrckvaaa epaaaatmgp paeatpgkag
      301 vrramgsark grrprgaalv reepdsssdd gieeairlyq rerrqeavgq qgppsaeekg
      361 pmapahglrg awpeahsktp gkkkpaapka tdlglggpdh dhpprppret tapappgsaa
      421 agtpgmdgsp hqadasaelm caeaildisk tilpapvdgg erppptspll egpdgpprpd
      481 gdssavdsdd siereirtfl alkaqsggpl prtetcarpa hsppllpsls apasstpdps
      541 pgcrrrrgrt pctprqprdt aetqdaqdae rgqgrvqpgq grapeaprke gesrsqpppf
      601 ktggpgdelg apdppgaapp gpgqmaegrr gdasseekss sldsdadlds aikdllrskr
      661 rlrkrcrdar agckkrvrfs ttetqfldkl ggfqkdwrdr sphllksclc kssretpgrp
      721 srvpsretag akadgsgped apsgpsapwp rgraaagglf sreseacepp gpsespssls
      781 ddsssvdsdd sieleirkfl aekakesvsr seipggglai lgtasgarpe lpgrkaqppg
      841 paaqagmctr sqrvrggpqp gaegprrpgr altpggggsp hpeqpcppat lawcelappr
      901 stsrpaparg apaprrnvca prdsgprgpe gvagegtfgq lpsrveagaw aegrgllart
      961 lgserdgvpr aglapqsrlq stwvlgpesr daaawrgglg gqrekgpgsq aqgspslavd
     1021 prrglpftgf spllstqlfh fgkcvpwgtk qaglfspslg lplqgpsfsa freaqaargp
     1081 vfgsprllvk eggrwpcrkp raglglsnrr gsgpeegvld lhfghrgldr deeepealgs
     1141 daselsdvsv eegggpaaqg palql
//
LOCUS       XP_061010112            1133 aa            linear   MAM 02-DEC-2023
DEFINITION  apical endosomal glycoprotein [Dama dama].
ACCESSION   XP_061010112
VERSION     XP_061010112.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154129.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1133
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1133
                     /product="apical endosomal glycoprotein"
                     /calculated_mol_wt=122512
     Region          63..218
                     /region_name="MAM"
                     /note="Domain in meprin, A5, receptor protein tyrosine
                     phosphatase mu (and others); smart00137"
                     /db_xref="CDD:214533"
     Region          229..261
                     /region_name="LDLa"
                     /note="Low Density Lipoprotein Receptor Class A domain, a
                     cysteine-rich repeat that plays a central role in
                     mammalian cholesterol metabolism; the receptor protein
                     binds LDL and transports it into cells by endocytosis; 7
                     successive cysteine-rich repeats of about...; cd00112"
                     /db_xref="CDD:238060"
     Site            order(234,242,253..254)
                     /site_type="active"
                     /note="putative binding surface [active]"
                     /db_xref="CDD:238060"
     Site            order(246,249,253,259..260)
                     /site_type="other"
                     /note="calcium-binding site [ion binding]"
                     /db_xref="CDD:238060"
     Site            256..260
                     /site_type="other"
                     /note="D-X-S-D-E motif"
                     /db_xref="CDD:238060"
     Region          271..423
                     /region_name="MAM"
                     /note="MAM domain, meprin/A5/mu; pfam00629"
                     /db_xref="CDD:459878"
     Region          454..487
                     /region_name="LDLa"
                     /note="Low Density Lipoprotein Receptor Class A domain, a
                     cysteine-rich repeat that plays a central role in
                     mammalian cholesterol metabolism; the receptor protein
                     binds LDL and transports it into cells by endocytosis; 7
                     successive cysteine-rich repeats of about...; cd00112"
                     /db_xref="CDD:238060"
     Site            order(459,466,477..478)
                     /site_type="active"
                     /note="putative binding surface [active]"
                     /db_xref="CDD:238060"
     Site            order(470,473,477,483..484)
                     /site_type="other"
                     /note="calcium-binding site [ion binding]"
                     /db_xref="CDD:238060"
     Site            480..484
                     /site_type="other"
                     /note="D-X-S-D-E motif"
                     /db_xref="CDD:238060"
     Region          572..728
                     /region_name="MAM"
                     /note="Domain in meprin, A5, receptor protein tyrosine
                     phosphatase mu (and others); smart00137"
                     /db_xref="CDD:214533"
     Region          734..885
                     /region_name="MAM"
                     /note="MAM domain, meprin/A5/mu; pfam00629"
                     /db_xref="CDD:459878"
     Region          890..1051
                     /region_name="MAM"
                     /note="Meprin, A5 protein, and protein tyrosine
                     phosphatase Mu (MAM) domain. MAM is an extracellular
                     domain which mediates protein-protein interactions and is
                     found in a diverse set of proteins, many of which are
                     known to function in cell adhesion. Members...; cd06263"
                     /db_xref="CDD:99706"
     CDS             1..1133
                     /gene="MAMDC4"
                     /coded_by="XM_061154129.1:1..3402"
                     /db_xref="GeneID:133064261"
ORIGIN      
        1 mplrghllpa vvmllagspg wawvpnhcrp preavcnfvc dcrgcpdeaq cgyhgvspsp
       61 gapftcdfeq dscgwrdist agyrwlrdra gaspeglgpr adhtlgtdlg wytavgthrg
      121 remataalrs pvlheaaptc elrlwyhaas gdvaelrlel thgvetltlw rstgpwgpdw
      181 qqlvvptgri pgafrvtfsa trnathrgtv alddvafwrc glptpqahcp lghhrcrsea
      241 cveppqlcdg edncgdrsde daapcrhyva tdfemglglw nhsegwtrnr saggpghpaw
      301 prgdhtwnsv qgsflasmad psapavlssp efqasdphnc slifyhylhg seagclqvfl
      361 qtgssaapqp pvllrrrqge lgaawvrdrv diqskhrfri flagqtgpgg vvglddlils
      421 dhcklvpepa gpppglwaps pwpqpsslrp rsfcepghff cgelcvppeq lcdfqeqcpg
      481 gedeqecgtt dfespsgggw edasvgrlqw vrlpapdwgg pgpdargaag hflavqrawg
      541 qlseearvlt pilgpsgprc elrlvyylqs hprevscnfe rgtcgwhsgh ltdaqwrrvg
      601 srgprydhtt gqghfvlldp tdppargpaa hlltqpqapt apqeclsfwf hlygpqigtl
      661 rlamrregga ethlwfrsgt hgnrwheawa tlhhppdagk yqllfeglrd gyhgsmaldd
      721 valrpgpcwa prrcsfedsa cgfstggrgl wtrqanaswg pdadhtteta qghymvvdms
      781 pqglprghaa lliseehrpl lqpacltfwy hlslrnpgtl kvhveeagrq qalsvssrgg
      841 aawrlgsvdv qagrawkvvf eavaagvehs ymalddlllq dgpcplpasc dfeaglcgws
      901 hvprpglggy swdwgsgasp sryaqppvdh tlgteaghfa lfetsvlgpg graaglisqp
      961 lppttasclr fwyrmdfpeh fhqgelrvll ssvqgqlavw gaggrrrhqw legqvdvast
     1021 aefqvvfeat lggqpavgpi alddveyrag qqcglptpsq gdgavatlvp aavggallll
     1081 vlllllgvag qrwlqkkggc psggemdtma pgfdnilfsa dritlpasvt ngq
//
LOCUS       XP_061010113             975 aa            linear   MAM 02-DEC-2023
DEFINITION  apical junction component 1 homolog [Dama dama].
ACCESSION   XP_061010113
VERSION     XP_061010113.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154130.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..975
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..975
                     /product="apical junction component 1 homolog"
                     /calculated_mol_wt=105918
     Region          <172..654
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          666..709
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     CDS             1..975
                     /gene="AJM1"
                     /coded_by="XM_061154130.1:357..3284"
                     /db_xref="GeneID:133064262"
ORIGIN      
        1 mtrtdppdll vstvyqdikv aapgpvsrpp pcerpmarpa apahfnkrhc rsfdfleald
       61 gvtmearpea pppepaapra rsrdgetrrr arsksaprap pslapapasp pvlprrgrea
      121 qraaradasp rreaaypalr alanelhpik lqpqrggpgr iaplcaatnr capvepsagp
      181 aphvrcrldi kpdeavlqha arssrpcgpp etapwpraap qlhgltvpgp rhvalsrtpt
      241 psdsyctdpr alycdgplpg prdyaerrsv pfttppgptq ffyteepegh pggfmaspgp
      301 pfdgyyprpf lpeeppgpsp rrgsgyyage vrtfpvqepp srsyygeapr aygppcgpry
      361 apeeprarpa arafytedfg ryrnrealtr typhprgspa wgdwgprpyr tlqvapppdp
      421 gpllaswhgg agtspprlat dsrhysrswd nilapgprre dplgrgrsye nllghearep
      481 rgtspegrrp pvvvnlstsp rryaalslse tslsekgrvg egpgrnwyvt peititdndl
      541 raaerpaars wempgsrprq sqpaapdgpa sgrqrsleql delitdlvid srspagqale
      601 pasdglgrql rrlldsrpsg pggpvlaprs ppasagsaee pagqgqaada spepsadedd
      661 lmtcsnarcg rtetmfnacl yfkschscyt yycsrlcrre dwdahkarcv ygrvgsvcrh
      721 vlqfcrdsgp vhrafsriar vgflsrgrgv lflgfpspgs adnflrfgle glllsptyls
      781 lrelathaap lgsyarelaa agrlyepaec fllsvsvavg pgatppgapa rpapaprspg
      841 ptvrkfakva laagsparpp pargrepdme tliltpppgt agldqdgeag rrarevafih
      901 iqrelrlrgv flrhefprvy eqlcefvean rrftpttiyp tdrrtgrpfm cmimaasepr
      961 aldwvasanl lddim
//
LOCUS       XP_061010114             975 aa            linear   MAM 02-DEC-2023
DEFINITION  apical junction component 1 homolog [Dama dama].
ACCESSION   XP_061010114
VERSION     XP_061010114.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154131.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..975
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..975
                     /product="apical junction component 1 homolog"
                     /calculated_mol_wt=105918
     Region          <172..654
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          666..709
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     CDS             1..975
                     /gene="AJM1"
                     /coded_by="XM_061154131.1:274..3201"
                     /db_xref="GeneID:133064262"
ORIGIN      
        1 mtrtdppdll vstvyqdikv aapgpvsrpp pcerpmarpa apahfnkrhc rsfdfleald
       61 gvtmearpea pppepaapra rsrdgetrrr arsksaprap pslapapasp pvlprrgrea
      121 qraaradasp rreaaypalr alanelhpik lqpqrggpgr iaplcaatnr capvepsagp
      181 aphvrcrldi kpdeavlqha arssrpcgpp etapwpraap qlhgltvpgp rhvalsrtpt
      241 psdsyctdpr alycdgplpg prdyaerrsv pfttppgptq ffyteepegh pggfmaspgp
      301 pfdgyyprpf lpeeppgpsp rrgsgyyage vrtfpvqepp srsyygeapr aygppcgpry
      361 apeeprarpa arafytedfg ryrnrealtr typhprgspa wgdwgprpyr tlqvapppdp
      421 gpllaswhgg agtspprlat dsrhysrswd nilapgprre dplgrgrsye nllghearep
      481 rgtspegrrp pvvvnlstsp rryaalslse tslsekgrvg egpgrnwyvt peititdndl
      541 raaerpaars wempgsrprq sqpaapdgpa sgrqrsleql delitdlvid srspagqale
      601 pasdglgrql rrlldsrpsg pggpvlaprs ppasagsaee pagqgqaada spepsadedd
      661 lmtcsnarcg rtetmfnacl yfkschscyt yycsrlcrre dwdahkarcv ygrvgsvcrh
      721 vlqfcrdsgp vhrafsriar vgflsrgrgv lflgfpspgs adnflrfgle glllsptyls
      781 lrelathaap lgsyarelaa agrlyepaec fllsvsvavg pgatppgapa rpapaprspg
      841 ptvrkfakva laagsparpp pargrepdme tliltpppgt agldqdgeag rrarevafih
      901 iqrelrlrgv flrhefprvy eqlcefvean rrftpttiyp tdrrtgrpfm cmimaasepr
      961 aldwvasanl lddim
//
LOCUS       XP_061010115             975 aa            linear   MAM 02-DEC-2023
DEFINITION  apical junction component 1 homolog [Dama dama].
ACCESSION   XP_061010115
VERSION     XP_061010115.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154132.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..975
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..975
                     /product="apical junction component 1 homolog"
                     /calculated_mol_wt=105918
     Region          <172..654
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          666..709
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     CDS             1..975
                     /gene="AJM1"
                     /coded_by="XM_061154132.1:360..3287"
                     /db_xref="GeneID:133064262"
ORIGIN      
        1 mtrtdppdll vstvyqdikv aapgpvsrpp pcerpmarpa apahfnkrhc rsfdfleald
       61 gvtmearpea pppepaapra rsrdgetrrr arsksaprap pslapapasp pvlprrgrea
      121 qraaradasp rreaaypalr alanelhpik lqpqrggpgr iaplcaatnr capvepsagp
      181 aphvrcrldi kpdeavlqha arssrpcgpp etapwpraap qlhgltvpgp rhvalsrtpt
      241 psdsyctdpr alycdgplpg prdyaerrsv pfttppgptq ffyteepegh pggfmaspgp
      301 pfdgyyprpf lpeeppgpsp rrgsgyyage vrtfpvqepp srsyygeapr aygppcgpry
      361 apeeprarpa arafytedfg ryrnrealtr typhprgspa wgdwgprpyr tlqvapppdp
      421 gpllaswhgg agtspprlat dsrhysrswd nilapgprre dplgrgrsye nllghearep
      481 rgtspegrrp pvvvnlstsp rryaalslse tslsekgrvg egpgrnwyvt peititdndl
      541 raaerpaars wempgsrprq sqpaapdgpa sgrqrsleql delitdlvid srspagqale
      601 pasdglgrql rrlldsrpsg pggpvlaprs ppasagsaee pagqgqaada spepsadedd
      661 lmtcsnarcg rtetmfnacl yfkschscyt yycsrlcrre dwdahkarcv ygrvgsvcrh
      721 vlqfcrdsgp vhrafsriar vgflsrgrgv lflgfpspgs adnflrfgle glllsptyls
      781 lrelathaap lgsyarelaa agrlyepaec fllsvsvavg pgatppgapa rpapaprspg
      841 ptvrkfakva laagsparpp pargrepdme tliltpppgt agldqdgeag rrarevafih
      901 iqrelrlrgv flrhefprvy eqlcefvean rrftpttiyp tdrrtgrpfm cmimaasepr
      961 aldwvasanl lddim
//
LOCUS       XP_061010117             975 aa            linear   MAM 02-DEC-2023
DEFINITION  apical junction component 1 homolog [Dama dama].
ACCESSION   XP_061010117
VERSION     XP_061010117.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154134.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..975
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..975
                     /product="apical junction component 1 homolog"
                     /calculated_mol_wt=105918
     Region          <172..654
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          666..709
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     CDS             1..975
                     /gene="AJM1"
                     /coded_by="XM_061154134.1:358..3285"
                     /db_xref="GeneID:133064262"
ORIGIN      
        1 mtrtdppdll vstvyqdikv aapgpvsrpp pcerpmarpa apahfnkrhc rsfdfleald
       61 gvtmearpea pppepaapra rsrdgetrrr arsksaprap pslapapasp pvlprrgrea
      121 qraaradasp rreaaypalr alanelhpik lqpqrggpgr iaplcaatnr capvepsagp
      181 aphvrcrldi kpdeavlqha arssrpcgpp etapwpraap qlhgltvpgp rhvalsrtpt
      241 psdsyctdpr alycdgplpg prdyaerrsv pfttppgptq ffyteepegh pggfmaspgp
      301 pfdgyyprpf lpeeppgpsp rrgsgyyage vrtfpvqepp srsyygeapr aygppcgpry
      361 apeeprarpa arafytedfg ryrnrealtr typhprgspa wgdwgprpyr tlqvapppdp
      421 gpllaswhgg agtspprlat dsrhysrswd nilapgprre dplgrgrsye nllghearep
      481 rgtspegrrp pvvvnlstsp rryaalslse tslsekgrvg egpgrnwyvt peititdndl
      541 raaerpaars wempgsrprq sqpaapdgpa sgrqrsleql delitdlvid srspagqale
      601 pasdglgrql rrlldsrpsg pggpvlaprs ppasagsaee pagqgqaada spepsadedd
      661 lmtcsnarcg rtetmfnacl yfkschscyt yycsrlcrre dwdahkarcv ygrvgsvcrh
      721 vlqfcrdsgp vhrafsriar vgflsrgrgv lflgfpspgs adnflrfgle glllsptyls
      781 lrelathaap lgsyarelaa agrlyepaec fllsvsvavg pgatppgapa rpapaprspg
      841 ptvrkfakva laagsparpp pargrepdme tliltpppgt agldqdgeag rrarevafih
      901 iqrelrlrgv flrhefprvy eqlcefvean rrftpttiyp tdrrtgrpfm cmimaasepr
      961 aldwvasanl lddim
//
LOCUS       XP_061010118             975 aa            linear   MAM 02-DEC-2023
DEFINITION  apical junction component 1 homolog [Dama dama].
ACCESSION   XP_061010118
VERSION     XP_061010118.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154135.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..975
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..975
                     /product="apical junction component 1 homolog"
                     /calculated_mol_wt=105918
     Region          <172..654
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          666..709
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     CDS             1..975
                     /gene="AJM1"
                     /coded_by="XM_061154135.1:177..3104"
                     /db_xref="GeneID:133064262"
ORIGIN      
        1 mtrtdppdll vstvyqdikv aapgpvsrpp pcerpmarpa apahfnkrhc rsfdfleald
       61 gvtmearpea pppepaapra rsrdgetrrr arsksaprap pslapapasp pvlprrgrea
      121 qraaradasp rreaaypalr alanelhpik lqpqrggpgr iaplcaatnr capvepsagp
      181 aphvrcrldi kpdeavlqha arssrpcgpp etapwpraap qlhgltvpgp rhvalsrtpt
      241 psdsyctdpr alycdgplpg prdyaerrsv pfttppgptq ffyteepegh pggfmaspgp
      301 pfdgyyprpf lpeeppgpsp rrgsgyyage vrtfpvqepp srsyygeapr aygppcgpry
      361 apeeprarpa arafytedfg ryrnrealtr typhprgspa wgdwgprpyr tlqvapppdp
      421 gpllaswhgg agtspprlat dsrhysrswd nilapgprre dplgrgrsye nllghearep
      481 rgtspegrrp pvvvnlstsp rryaalslse tslsekgrvg egpgrnwyvt peititdndl
      541 raaerpaars wempgsrprq sqpaapdgpa sgrqrsleql delitdlvid srspagqale
      601 pasdglgrql rrlldsrpsg pggpvlaprs ppasagsaee pagqgqaada spepsadedd
      661 lmtcsnarcg rtetmfnacl yfkschscyt yycsrlcrre dwdahkarcv ygrvgsvcrh
      721 vlqfcrdsgp vhrafsriar vgflsrgrgv lflgfpspgs adnflrfgle glllsptyls
      781 lrelathaap lgsyarelaa agrlyepaec fllsvsvavg pgatppgapa rpapaprspg
      841 ptvrkfakva laagsparpp pargrepdme tliltpppgt agldqdgeag rrarevafih
      901 iqrelrlrgv flrhefprvy eqlcefvean rrftpttiyp tdrrtgrpfm cmimaasepr
      961 aldwvasanl lddim
//
LOCUS       XP_061010119             822 aa            linear   MAM 02-DEC-2023
DEFINITION  anaphase-promoting complex subunit 2 [Dama dama].
ACCESSION   XP_061010119
VERSION     XP_061010119.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154136.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..822
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..822
                     /product="anaphase-promoting complex subunit 2"
                     /calculated_mol_wt=93233
     Region          <512..694
                     /region_name="Cullin"
                     /note="Cullin family; pfam00888"
                     /db_xref="CDD:459983"
     Region          757..817
                     /region_name="APC2"
                     /note="Anaphase promoting complex (APC) subunit 2;
                     smart01013"
                     /db_xref="CDD:198081"
     CDS             1..822
                     /gene="ANAPC2"
                     /coded_by="XM_061154136.1:39..2507"
                     /db_xref="GeneID:133064263"
ORIGIN      
        1 maaaaaaaaa asdagpaqel laawntvstg lvppaalgla ssrtsgavpp keeelraave
       61 vlrghglhsv leewfvevlq ndlqanisle fwnaisqren cadepqclll lldafglles
      121 rldpylrsle llekwtrlgl lmgtgaqglr ekvhttlrgv lffstprafq emiqrlygrf
      181 lrvymqskrk geggtdpele geldsryarr ryyrllqspl cagcgsdkqq cwcrqaleqf
      241 hqlsqvlhrl sllervsaea vtstlhqvtr ermedrcrge yersflrefh kwiervvgwl
      301 gkvflqdgps rpaspepgpt lrrwrchvqr ffyriyaglr ieelfsiird fpdsrpaved
      361 lkyclertdq rpqllvslra aletrllhpg vntcdiitly isaikalrvl dpsmvvleva
      421 cepirrylrt redtvrqiva gltgdsdgtg dlavelsktd pasletgqds eddsgepedw
      481 vpdpvdadpg kssskrrssd iisllvsiyg skdlfineyr slladrllhq fsfspereir
      541 nvellklrfg eapmhfcevm lkdmadsrri nanireedek rpaeeqppfg vyavilssef
      601 wppfkdekle vpedireale vycrkyeklk amrtlswkht lglvtmdvel adrtlsvavt
      661 pvqavvllyf qdqaswglee lseavkmpaa llrrrlsvwl qqgvlreepa gtfsvveeer
      721 pqdrdsmvlv dsddesdsgl asqadqkeee lllfwtyiqa mltnleslsl eriysmlrmf
      781 vvtgpalaei dlqelqgflq rkvrdqqlvy sagvyrlpks cg
//
LOCUS       XP_061010120             737 aa            linear   MAM 02-DEC-2023
DEFINITION  taperin [Dama dama].
ACCESSION   XP_061010120
VERSION     XP_061010120.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154137.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..737
                     /product="taperin"
                     /calculated_mol_wt=77537
     Region          8..108
                     /region_name="Phostensin_N"
                     /note="PP1-regulatory protein, Phostensin N-terminal;
                     pfam13916"
                     /db_xref="CDD:464039"
     Region          <128..439
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          492..625
                     /region_name="Phostensin"
                     /note="Phostensin PP1-binding and SH3-binding region;
                     pfam13914"
                     /db_xref="CDD:464038"
     CDS             1..737
                     /gene="TPRN"
                     /coded_by="XM_061154137.1:24..2237"
                     /db_xref="GeneID:133064264"
ORIGIN      
        1 maglgrpgpa praampawkr eilerkrakl aalgggaapv agagttetag pvteplvlae
       61 slgplrenpf mrleserrhg arraggagaa gpgarpaeql lelycrvpgv rtiradnili
      121 iesepgfppa pspglgpggt ariraaevlv yeapptagrv srllqkfdpp aaprrrgspe
      181 rvrpalppsp gpavprvger aacfqsdper cgsglgpgpr rsgflhktss nsftvhprgl
      241 rhsagtrplp ngplapesra gaangfegsa pepgewkpkv esgeapahqs pspgtpsatp
      301 aadpalptls sssatpsqrq wvsaatsand sfeirpaskp dmgripagdl qaralaslrv
      361 nsrnsfvvip krktsgappg egrrsvappe kevgwasqhp eheaqqvpgv dgvfaggrsp
      421 priveggspa paaalvdpav rwqglpsppp speaepaqgf qtsglakngr eprrpglpit
      481 fidevdsede vpqeaklpcs gagappqyhp hptrpgylse lqhrggntft vvpkrkpgav
      541 qangearpte aeeeepgrvs eppaaagtsl kkryptvhei eviggylalq kscltkagss
      601 rkkmkisfnd kslqttfeyp pesslqeeea eeeeeegyve edaeasgpdg vpekhlmlfl
      661 pratfvsrvg pespqlpdgs sslssytpkh svafskwpeq vlertpsvee appkevmltp
      721 agqndlsdfr sepalyf
//
LOCUS       XP_061010121             709 aa            linear   MAM 02-DEC-2023
DEFINITION  rab-like protein 6 isoform X1 [Dama dama].
ACCESSION   XP_061010121
VERSION     XP_061010121.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154138.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..709
                     /product="rab-like protein 6 isoform X1"
                     /calculated_mol_wt=77678
     Region          44..>186
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            50..57
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206648"
     Site            75
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            77..79
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            order(100..102,105)
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            order(102,105,141..142)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     Site            176..179
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Region          <401..543
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..709
                     /gene="RABL6"
                     /coded_by="XM_061154138.1:218..2347"
                     /db_xref="GeneID:133064265"
ORIGIN      
        1 mfsalkklvg seqapgrdrn ipaglqsmnq alqrrfakgv qynmkivirg drntgktalw
       61 hrlqgkkfve eyiptqeiqv tsihwsyktt ddivkvevwd vvdkgkckkr gdglkmendp
      121 qeaesemald aefldvyknc ngvvmmfdit kqwtfnyilr elpkvpthvp vcvlgnyrdm
      181 gehrvilpgd vrdvldhldr ppgssyfrya essmknsfgl kylhrffnip flqlqretll
      241 rqletnqldi datleelsvq qetedqnydi flemmearsr ghasplttng qspssgsqsp
      301 vvppsavstg ssspstpqpa pqpplqappa ppapaeappp paapprrgii arlfgaapat
      361 esappppepa pvteapakvq nvedfvpeds ldrsfledta ptkdekrlga rgppdsdsdg
      421 etpagnpmva gfqddvdled kppsrplppt grapseditl sseeeaeega ghpkaavlap
      481 qkcpepetrr sstraagppr daaprkaepr rpggtkahpe gpsrgleegk dqpassesdt
      541 egpiaaqmls fvmddpdfes dsdahrrage fpvredlsdl tdeeagpvqp pappkplaps
      601 frlkddsdlf glgleepgrk dsseedkegr ppakekkkkk kkgkeeedka akkrskhkrs
      661 rervddkgrd errrrprgpq rtaldeleaf lgggapggpl rgggdyeal
//
LOCUS       XP_061010122             664 aa            linear   MAM 02-DEC-2023
DEFINITION  rab-like protein 6 isoform X2 [Dama dama].
ACCESSION   XP_061010122
VERSION     XP_061010122.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154139.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..664
                     /product="rab-like protein 6 isoform X2"
                     /calculated_mol_wt=72309
     Region          <92..>141
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            131..134
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     CDS             1..664
                     /gene="RABL6"
                     /coded_by="XM_061154139.1:219..2213"
                     /db_xref="GeneID:133064265"
ORIGIN      
        1 mfsalkklvg seqapgrdrn ipaglqsmnq alqrrfakgv qynttddivk vevwdvvdkg
       61 kckkrgdglk mendpqeaes emaldaefld vykncngvvm mfditkqwtf nyilrelpkv
      121 pthvpvcvlg nyrdmgehrv ilpgdvrdvl dhldrppgss yfryaessmk nsfglkylhr
      181 ffnipflqlq retllrqlet nqldidatle elsvqqeted qnydiflemm earsrghasp
      241 lttngqspss gsqspvvpps avstgsssps tpqpapqppl qappappapa eappppaapp
      301 rrgiiarlfg aapatesapp ppepapvtea pakvqnvedf vpedsldrsf ledtaptkde
      361 krlgargppd sdsdgetpag npmvagfqdd vdledkppsr plpptgraps editlsseee
      421 aeegaghpka avlapqkcpe petrrsstra agpprdaapr kaeprrpggt kahpegpsrg
      481 leegkdqpas sesdtegpia aqmlsfvmdd pdfesdsdah rragefpvre dlsdltdeea
      541 gpvqppappk plapsfrlkd dsdlfglgle epgrkdssee dkegrppake kkkkkkkgke
      601 eedkaakkrs khkrsrervd dkgrderrrr prgpqrtald eleaflggga pggplrgggd
      661 yeal
//
LOCUS       XP_061010123             637 aa            linear   MAM 02-DEC-2023
DEFINITION  rab-like protein 6 isoform X3 [Dama dama].
ACCESSION   XP_061010123
VERSION     XP_061010123.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154140.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..637
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..637
                     /product="rab-like protein 6 isoform X3"
                     /calculated_mol_wt=70175
     Region          44..>186
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            50..57
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206648"
     Site            75
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            77..79
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            order(100..102,105)
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            order(102,105,141..142)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     Site            176..179
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     CDS             1..637
                     /gene="RABL6"
                     /coded_by="XM_061154140.1:219..2132"
                     /db_xref="GeneID:133064265"
ORIGIN      
        1 mfsalkklvg seqapgrdrn ipaglqsmnq alqrrfakgv qynmkivirg drntgktalw
       61 hrlqgkkfve eyiptqeiqv tsihwsyktt ddivkvevwd vvdkgkckkr gdglkmendp
      121 qeaesemald aefldvyknc ngvvmmfdit kqwtfnyilr elpkvpthvp vcvlgnyrdm
      181 gehrvilpgd vrdvldhldr ppgssyfrya essmknsfgl kylhrffnip flqlqretll
      241 rqletnqldi datleelsvq qetedqnydi flemmearsr ghasplttng qspssgsqsp
      301 vvppsavstg ssspstpqpa pqpplqappa ppapaeappp paapprrgii arlfgaapat
      361 esappppepa pvteapakvq nvedfvpeds ldrsfledta ptkdekrlga rgppdsdrss
      421 traagpprda aprkaeprrp ggtkahpegp srgleegkdq passesdteg piaaqmlsfv
      481 mddpdfesds dahrragefp vredlsdltd eeagpvqppa ppkplapsfr lkddsdlfgl
      541 gleepgrkds seedkegrpp akekkkkkkk gkeeedkaak krskhkrsre rvddkgrder
      601 rrrprgpqrt aldeleaflg ggapggplrg ggdyeal
//
LOCUS       XP_061010124             655 aa            linear   MAM 02-DEC-2023
DEFINITION  endoplasmic reticulum mannosyl-oligosaccharide
            1,2-alpha-mannosidase-like isoform X1 [Dama dama].
ACCESSION   XP_061010124
VERSION     XP_061010124.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154141.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..655
                     /product="endoplasmic reticulum mannosyl-oligosaccharide
                     1,2-alpha-mannosidase-like isoform X1"
                     /calculated_mol_wt=73891
     Region          <73..>194
                     /region_name="PRK07003"
                     /note="DNA polymerase III subunit gamma/tau"
                     /db_xref="CDD:235906"
     Region          212..651
                     /region_name="Glyco_hydro_47"
                     /note="Glycosyl hydrolase family 47; pfam01532"
                     /db_xref="CDD:460241"
     CDS             1..655
                     /gene="LOC133064266"
                     /coded_by="XM_061154141.1:139..2106"
                     /db_xref="GeneID:133064266"
ORIGIN      
        1 mypppaparr dfisvtlspg rsygggqglr rrscwrkwkq lsrlqrtvvl fllavlmlfg
       61 llsyvnvade wtavdsrsaa awqmrpanpp vlpaprkaae npetvaglsp qkpqrhfrrg
      121 ppnlqtrapa gdaqerrqaq aqrraevvge agwraesqrd glswrgagtk ppqgteppge
      181 kaelpprpsp kavrfqanpa sqnerqkavv daflhawagy rkfawghdel kpltrsfsew
      241 fglgltlida ldtmwilglk kefqearnwv skrllfqkdv dvnlfestir ilggllsafh
      301 lsgdvlfltk aedfgnrlmp afrtpskipy sdvnigtgva hpprwtsdst vaevtsiqle
      361 frelsrltgd kkfqeaaeev trrvhalrgk ldglvpmfis tnsgsfthlg vftlgarads
      421 yyeyllkqwi qggkkesqll edyleavdgi rkhllaksep rkltfvgeln hgrfsakmdh
      481 lvcflpgtla lgahhglpae hmelaqalmd tcyqmyrqme tglspeiahf nlhhtkavkd
      541 iqvkaadrhn llrpetvesl fylyrltgdr kyqdwgweil hsfntytrvp sggyssisnv
      601 qdprhpqprd kmesfflget lkylyllfsd dpdllsldty vfnteahplp iwaps
//
LOCUS       XP_061010125             638 aa            linear   MAM 02-DEC-2023
DEFINITION  endoplasmic reticulum mannosyl-oligosaccharide
            1,2-alpha-mannosidase-like isoform X2 [Dama dama].
ACCESSION   XP_061010125
VERSION     XP_061010125.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154142.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..638
                     /product="endoplasmic reticulum mannosyl-oligosaccharide
                     1,2-alpha-mannosidase-like isoform X2"
                     /calculated_mol_wt=71729
     Region          212..634
                     /region_name="Glyco_hydro_47"
                     /note="Glycosyl hydrolase family 47; pfam01532"
                     /db_xref="CDD:460241"
     CDS             1..638
                     /gene="LOC133064266"
                     /coded_by="XM_061154142.1:139..2055"
                     /db_xref="GeneID:133064266"
ORIGIN      
        1 mypppaparr dfisvtlspg rsygggqglr rrscwrkwkq lsrlqrtvvl fllavlmlfg
       61 llsyvnvade wtavdsrsaa awqmrpanpp vlpaprkaae npetvaglsp qkpqrhfrrg
      121 ppnlqtrapa gdaqerrqaq aqrraevvge agwraesqrd glswrgagtk ppqgteppge
      181 kaelpprpsp kavrfqanpa sqnerqkavv daflhawagy rkfawghdel kpltrsfsew
      241 fglgltlida ldtmwilglk kdvdvnlfes tirilgglls afhlsgdvlf ltkaedfgnr
      301 lmpafrtpsk ipysdvnigt gvahpprwts dstvaevtsi qlefrelsrl tgdkkfqeaa
      361 eevtrrvhal rgkldglvpm fistnsgsft hlgvftlgar adsyyeyllk qwiqggkkes
      421 qlledyleav dgirkhllak seprkltfvg elnhgrfsak mdhlvcflpg tlalgahhgl
      481 paehmelaqa lmdtcyqmyr qmetglspei ahfnlhhtka vkdiqvkaad rhnllrpetv
      541 eslfylyrlt gdrkyqdwgw eilhsfntyt rvpsggyssi snvqdprhpq prdkmesffl
      601 getlkylyll fsddpdllsl dtyvfnteah plpiwaps
//
LOCUS       XP_061010126             601 aa            linear   MAM 02-DEC-2023
DEFINITION  NADPH-dependent diflavin oxidoreductase 1 isoform X1 [Dama dama].
ACCESSION   XP_061010126
VERSION     XP_061010126.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154143.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..601
                     /product="NADPH-dependent diflavin oxidoreductase 1
                     isoform X1"
                     /calculated_mol_wt=65851
     Region          2..520
                     /region_name="CysJ"
                     /note="Flavoprotein (flavin reductase) subunit CysJ of
                     sulfite and N-hydroxylaminopurine reductases [Nucleotide
                     transport and metabolism, Inorganic ion transport and
                     metabolism]; COG0369"
                     /db_xref="CDD:440138"
     CDS             1..601
                     /gene="NDOR1"
                     /coded_by="XM_061154143.1:114..1919"
                     /db_xref="GeneID:133064268"
ORIGIN      
        1 mpssrllvlf gsqtgtaqdv serlgrearr rqlncrvqal dsypvvnlin eplvifvcat
       61 tgqgdppdnm ksfwrfifrr slpstalcqm dfavlglgds sytkfnfvak klhrrllqlg
      121 gnallpvclg ddqhelgpda avdpwlqdlw ekvlgphsvp lnldlsppgv lwpskftlqf
      181 lkdtpssspe elcvagtdpq gppselqpfl apmvsnrrvt gpshfqdvrl iefdisdsgi
      241 sfaagdvvli qpentashvq qfcqalgldp eqhftlqpre pgvacparlp qpcsmrrfvs
      301 qyldiasvpr rsffellacl sphelerekl refgsargqe elceyctrpr rtalevlcdf
      361 phtaaaippd ylldlvplir prafsiassl rahplrlqil vavvqyqtrl reprrglcss
      421 wlasldpaqg pvrvplwvrs ggltfpktpd vpvimvgpgt gvapfraaiq ervaqgetgn
      481 vlffgcrrqd qdfyweaewk qlqargcltl vtafsrdqtq tvpcpagaeg vraapapgvr
      541 aagvgaaggp grpllpgrqr qvhacrcvqh pavhlpgggr alwprcgrlp rpaaadtafp
      601 d
//
LOCUS       XP_061010127             597 aa            linear   MAM 02-DEC-2023
DEFINITION  NADPH-dependent diflavin oxidoreductase 1 isoform X2 [Dama dama].
ACCESSION   XP_061010127
VERSION     XP_061010127.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154144.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..597
                     /product="NADPH-dependent diflavin oxidoreductase 1
                     isoform X2"
                     /calculated_mol_wt=66463
     Region          2..592
                     /region_name="CysJ"
                     /note="Flavoprotein (flavin reductase) subunit CysJ of
                     sulfite and N-hydroxylaminopurine reductases [Nucleotide
                     transport and metabolism, Inorganic ion transport and
                     metabolism]; COG0369"
                     /db_xref="CDD:440138"
     CDS             1..597
                     /gene="NDOR1"
                     /coded_by="XM_061154144.1:113..1906"
                     /db_xref="GeneID:133064268"
ORIGIN      
        1 mpssrllvlf gsqtgtaqdv serlgrearr rqlncrvqal dsypvvnlin eplvifvcat
       61 tgqgdppdnm ksfwrfifrr slpstalcqm dfavlglgds sytkfnfvak klhrrllqlg
      121 gnallpvclg ddqhelgpda avdpwlqdlw ekvlgphsvp lnldlsppgv lwpskftlqf
      181 lkdtpssspe elcvagtdpq gppselqpfl apmvsnrrvt gpshfqdvrl iefdisdsgi
      241 sfaagdvvli qpentashvq qfcqalgldp eqhftlqpre pgvacparlp qpcsmrrfvs
      301 qyldiasvpr rsffellacl sphelerekl refgsargqe elceyctrpr rtalevlcdf
      361 phtaaaippd ylldlvplir prafsiassl rahplrlqil vavvqyqtrl reprrglcss
      421 wlasldpaqg pvrvplwvrs ggltfpktpd vpvimvgpgt gvapfraaiq ervaqgetgn
      481 vlffgcrrqd qdfyweaewk qlqargcltl vtafsrdqeq kvyvqhrlra fgplvwelle
      541 gqgahfylag nakympadvs ntllsifree gglsgpdaaa ylarlqrtlr fqtetwa
//
LOCUS       XP_061010128             532 aa            linear   MAM 02-DEC-2023
DEFINITION  NADPH-dependent diflavin oxidoreductase 1 isoform X3 [Dama dama].
ACCESSION   XP_061010128
VERSION     XP_061010128.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154145.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..532
                     /product="NADPH-dependent diflavin oxidoreductase 1
                     isoform X3"
                     /calculated_mol_wt=58297
     Region          <1..76
                     /region_name="Flavodoxin_1"
                     /note="pfam00258"
                     /db_xref="CDD:425562"
     Region          143..453
                     /region_name="FNR_like"
                     /note="Ferredoxin reductase (FNR), an FAD and NAD(P)
                     binding protein, was intially identified as a chloroplast
                     reductase activity, catalyzing the electron transfer from
                     reduced iron-sulfur protein ferredoxin to NADP+ as the
                     final step in the electron transport...; cl06868"
                     /db_xref="CDD:447143"
     Site            order(178,313..316,331..333,347..350,391)
                     /site_type="other"
                     /note="FAD binding pocket [chemical binding]"
                     /db_xref="CDD:99803"
     Site            order(313,315..316)
                     /site_type="other"
                     /note="conserved FAD binding motif [chemical binding]"
                     /db_xref="CDD:99803"
     Site            order(347,350,353,359)
                     /site_type="other"
                     /note="phosphate binding motif [ion binding]"
                     /db_xref="CDD:99803"
     Site            order(386,390..393,395)
                     /site_type="other"
                     /note="beta-alpha-beta structure motif"
                     /db_xref="CDD:99803"
     CDS             1..532
                     /gene="NDOR1"
                     /coded_by="XM_061154145.1:156..1754"
                     /db_xref="GeneID:133064268"
ORIGIN      
        1 mksfwrfifr rslpstalcq mdfavlglgd ssytkfnfva kklhrrllql ggnallpvcl
       61 gddqhelgpd aavdpwlqdl wekvlgphsv plnldlsppg vlwpskftlq flkdtpsssp
      121 eelcvagtdp qgppselqpf lapmvsnrrv tgpshfqdvr liefdisdsg isfaagdvvl
      181 iqpentashv qqfcqalgld peqhftlqpr epgvacparl pqpcsmrrfv sqyldiasvp
      241 rrsffellac lsphelerek lrefgsargq eelceyctrp rrtalevlcd fphtaaaipp
      301 dylldlvpli rprafsiass lrahplrlqi lvavvqyqtr lreprrglcs swlasldpaq
      361 gpvrvplwvr sggltfpktp dvpvimvgpg tgvapfraai qervaqgetg nvlffgcrrq
      421 dqdfyweaew kqlqargclt lvtafsrdqt qtvpcpagae gvraapapgv raagvgaagg
      481 pgrpllpgrq rqvhacrcvq hpavhlpggg ralwprcgrl prpaaadtaf pd
//
LOCUS       XP_061010130             567 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box/WD repeat-containing protein 5 [Dama dama].
ACCESSION   XP_061010130
VERSION     XP_061010130.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154147.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..567
                     /product="F-box/WD repeat-containing protein 5"
                     /calculated_mol_wt=63362
     Region          7..51
                     /region_name="F-box_FBXW5"
                     /note="F-box domain found in F-box/WD repeat-containing
                     protein 5 (FBXW5) and similar proteins; cd22132"
                     /db_xref="CDD:438904"
     Site            order(9,13,16..17,20..21,25,27..28,32..34,36)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438904"
     Region          <75..191
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          85..120
                     /region_name="WD40"
                     /note="WD40 repeats; smart00320"
                     /db_xref="CDD:197651"
     Region          418..460
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <446..538
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          471..497
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          512..537
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..567
                     /gene="FBXW5"
                     /coded_by="XM_061154147.1:150..1853"
                     /db_xref="GeneID:133064269"
ORIGIN      
        1 mdeggapllp dslvyqifls lgpadvlaag lvcrqwqavs rdeflwreqf yryyqvardv
       61 prhpaatswf eefrrlydav pcvevqtlre hsdqvlhlsf shsggqfasc skdctvkiws
      121 ndlsislihs admrpynwsy tqfsqfnqdd slllasgvfl gphnsssgei avisldtfal
      181 lsrvrnkpyd vfgcwltdts lisgnlhrig ditscsvlwl nnafqdvese nvnvvkrlfk
      241 iqnlnastir tvmvadcsrf dspdllldag tpgtdssrvf dlgsdgedee sdpgpartkg
      301 lrrlldglle graqpllpes tletkvaell aqghtkppeq graaagnkll ifttgcltys
      361 phqigikqil phqmttagpv lgegrgsdaf fdaldhvidv hghiigmgls pdnrylyvns
      421 rawpsgsvva dpmqpppiae eidllvfdlk tmrevkralr ahraytpnde cffifldvsr
      481 dfvasgaedr hgyiwdrhyn iclaklrhqd vvnsvvfspq eqellltasd datikawrsp
      541 rtvrvlqapr prprprpffs wfasqkr
//
LOCUS       XP_061010131             567 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box/WD repeat-containing protein 5 [Dama dama].
ACCESSION   XP_061010131
VERSION     XP_061010131.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154148.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..567
                     /product="F-box/WD repeat-containing protein 5"
                     /calculated_mol_wt=63362
     Region          7..51
                     /region_name="F-box_FBXW5"
                     /note="F-box domain found in F-box/WD repeat-containing
                     protein 5 (FBXW5) and similar proteins; cd22132"
                     /db_xref="CDD:438904"
     Site            order(9,13,16..17,20..21,25,27..28,32..34,36)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438904"
     Region          <75..191
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          85..120
                     /region_name="WD40"
                     /note="WD40 repeats; smart00320"
                     /db_xref="CDD:197651"
     Region          418..460
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <446..538
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          471..497
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          512..537
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..567
                     /gene="FBXW5"
                     /coded_by="XM_061154148.1:140..1843"
                     /db_xref="GeneID:133064269"
ORIGIN      
        1 mdeggapllp dslvyqifls lgpadvlaag lvcrqwqavs rdeflwreqf yryyqvardv
       61 prhpaatswf eefrrlydav pcvevqtlre hsdqvlhlsf shsggqfasc skdctvkiws
      121 ndlsislihs admrpynwsy tqfsqfnqdd slllasgvfl gphnsssgei avisldtfal
      181 lsrvrnkpyd vfgcwltdts lisgnlhrig ditscsvlwl nnafqdvese nvnvvkrlfk
      241 iqnlnastir tvmvadcsrf dspdllldag tpgtdssrvf dlgsdgedee sdpgpartkg
      301 lrrlldglle graqpllpes tletkvaell aqghtkppeq graaagnkll ifttgcltys
      361 phqigikqil phqmttagpv lgegrgsdaf fdaldhvidv hghiigmgls pdnrylyvns
      421 rawpsgsvva dpmqpppiae eidllvfdlk tmrevkralr ahraytpnde cffifldvsr
      481 dfvasgaedr hgyiwdrhyn iclaklrhqd vvnsvvfspq eqellltasd datikawrsp
      541 rtvrvlqapr prprprpffs wfasqkr
//
LOCUS       XP_061010132             567 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box/WD repeat-containing protein 5 [Dama dama].
ACCESSION   XP_061010132
VERSION     XP_061010132.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154149.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..567
                     /product="F-box/WD repeat-containing protein 5"
                     /calculated_mol_wt=63362
     Region          7..51
                     /region_name="F-box_FBXW5"
                     /note="F-box domain found in F-box/WD repeat-containing
                     protein 5 (FBXW5) and similar proteins; cd22132"
                     /db_xref="CDD:438904"
     Site            order(9,13,16..17,20..21,25,27..28,32..34,36)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438904"
     Region          <75..191
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          85..120
                     /region_name="WD40"
                     /note="WD40 repeats; smart00320"
                     /db_xref="CDD:197651"
     Region          418..460
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <446..538
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          471..497
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          512..537
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..567
                     /gene="FBXW5"
                     /coded_by="XM_061154149.1:163..1866"
                     /db_xref="GeneID:133064269"
ORIGIN      
        1 mdeggapllp dslvyqifls lgpadvlaag lvcrqwqavs rdeflwreqf yryyqvardv
       61 prhpaatswf eefrrlydav pcvevqtlre hsdqvlhlsf shsggqfasc skdctvkiws
      121 ndlsislihs admrpynwsy tqfsqfnqdd slllasgvfl gphnsssgei avisldtfal
      181 lsrvrnkpyd vfgcwltdts lisgnlhrig ditscsvlwl nnafqdvese nvnvvkrlfk
      241 iqnlnastir tvmvadcsrf dspdllldag tpgtdssrvf dlgsdgedee sdpgpartkg
      301 lrrlldglle graqpllpes tletkvaell aqghtkppeq graaagnkll ifttgcltys
      361 phqigikqil phqmttagpv lgegrgsdaf fdaldhvidv hghiigmgls pdnrylyvns
      421 rawpsgsvva dpmqpppiae eidllvfdlk tmrevkralr ahraytpnde cffifldvsr
      481 dfvasgaedr hgyiwdrhyn iclaklrhqd vvnsvvfspq eqellltasd datikawrsp
      541 rtvrvlqapr prprprpffs wfasqkr
//
LOCUS       XP_061010133             516 aa            linear   MAM 02-DEC-2023
DEFINITION  TNF receptor-associated factor 2 [Dama dama].
ACCESSION   XP_061010133
VERSION     XP_061010133.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154150.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..516
                     /product="TNF receptor-associated factor 2"
                     /calculated_mol_wt=57309
     Region          28..>156
                     /region_name="RAD18"
                     /note="RING-finger-containing E3 ubiquitin ligase [Signal
                     transduction mechanisms]; COG5432"
                     /db_xref="CDD:227719"
     Region          31..73
                     /region_name="RING-HC_TRAF2"
                     /note="RING finger, HC subclass, found in tumor necrosis
                     factor (TNF) receptor-associated factor 2 (TRAF2) and
                     similar proteins; cd16639"
                     /db_xref="CDD:438301"
     Region          178..235
                     /region_name="zf-TRAF"
                     /note="TRAF-type zinc finger; pfam02176"
                     /db_xref="CDD:280357"
     Region          282..345
                     /region_name="TRAF_BIRC3_bd"
                     /note="TNF receptor-associated factor BIRC3 binding
                     domain; pfam16673"
                     /db_xref="CDD:465226"
     Region          349..512
                     /region_name="MATH_TRAF2"
                     /note="Tumor Necrosis Factor Receptor (TNFR) Associated
                     Factor (TRAF) family, TRAF2 subfamily, TRAF domain; TRAF
                     molecules serve as adapter proteins that link TNFRs and
                     downstream kinase cascades resulting in the activation of
                     transcription factors and the...; cd03778"
                     /db_xref="CDD:239747"
     Site            order(350,353,361,363,370,372,400..401,432,435,452)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:239747"
     Site            order(408,410,414,425,462..463,468,470..471,481..483)
                     /site_type="active"
                     /note="TNFR binding site [active]"
                     /db_xref="CDD:239747"
     Site            order(416,421,460,463..465,468..469,471,482..483,489)
                     /site_type="active"
                     /note="TRADD binding site [active]"
                     /db_xref="CDD:239747"
     CDS             1..516
                     /gene="TRAF2"
                     /coded_by="XM_061154150.1:46..1596"
                     /db_xref="GeneID:133064270"
ORIGIN      
        1 maaasvtpps sldllqpgfs ktllgtkled kylcsacrnv lrrpfqaqcg hrycsfclss
       61 ilssgpqsca acvqegiyee gvsilesssa fpdnaarrev eslpavcpse gcswkgtlke
      121 yescheghcp fmltecpack glvrlgekeh hlehecpers lscrhcrapc cpadmkahhq
      181 icpkfpltcd gcgkkkiare kfqdhvrtcg rcrvpcrfha vgcpemvese kqqeheaqrl
      241 rehlalllgv lleagrppgd grpllgqgeg aweastpsra aellqrceal erktatfeni
      301 vcvlnrever vavtaeacgr qhrldqdrie alsnkvqqle rsiglkdlam adleqkvlem
      361 eastfdgvfi wkisdfsrkr qeavagrtpa ifspafytsr ygykmclray lngdgtgrgt
      421 hlslffvlmr gphdallrwp fnqkvtlmll dqnhrehvid afrpdvtsss fqrpvsdmni
      481 asgcplfcpv skmeaknsyv rddaifikai vdltgl
//
LOCUS       XP_061010134             516 aa            linear   MAM 02-DEC-2023
DEFINITION  TNF receptor-associated factor 2 [Dama dama].
ACCESSION   XP_061010134
VERSION     XP_061010134.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154151.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..516
                     /product="TNF receptor-associated factor 2"
                     /calculated_mol_wt=57309
     Region          28..>156
                     /region_name="RAD18"
                     /note="RING-finger-containing E3 ubiquitin ligase [Signal
                     transduction mechanisms]; COG5432"
                     /db_xref="CDD:227719"
     Region          31..73
                     /region_name="RING-HC_TRAF2"
                     /note="RING finger, HC subclass, found in tumor necrosis
                     factor (TNF) receptor-associated factor 2 (TRAF2) and
                     similar proteins; cd16639"
                     /db_xref="CDD:438301"
     Region          178..235
                     /region_name="zf-TRAF"
                     /note="TRAF-type zinc finger; pfam02176"
                     /db_xref="CDD:280357"
     Region          282..345
                     /region_name="TRAF_BIRC3_bd"
                     /note="TNF receptor-associated factor BIRC3 binding
                     domain; pfam16673"
                     /db_xref="CDD:465226"
     Region          349..512
                     /region_name="MATH_TRAF2"
                     /note="Tumor Necrosis Factor Receptor (TNFR) Associated
                     Factor (TRAF) family, TRAF2 subfamily, TRAF domain; TRAF
                     molecules serve as adapter proteins that link TNFRs and
                     downstream kinase cascades resulting in the activation of
                     transcription factors and the...; cd03778"
                     /db_xref="CDD:239747"
     Site            order(350,353,361,363,370,372,400..401,432,435,452)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:239747"
     Site            order(408,410,414,425,462..463,468,470..471,481..483)
                     /site_type="active"
                     /note="TNFR binding site [active]"
                     /db_xref="CDD:239747"
     Site            order(416,421,460,463..465,468..469,471,482..483,489)
                     /site_type="active"
                     /note="TRADD binding site [active]"
                     /db_xref="CDD:239747"
     CDS             1..516
                     /gene="TRAF2"
                     /coded_by="XM_061154151.1:91..1641"
                     /db_xref="GeneID:133064270"
ORIGIN      
        1 maaasvtpps sldllqpgfs ktllgtkled kylcsacrnv lrrpfqaqcg hrycsfclss
       61 ilssgpqsca acvqegiyee gvsilesssa fpdnaarrev eslpavcpse gcswkgtlke
      121 yescheghcp fmltecpack glvrlgekeh hlehecpers lscrhcrapc cpadmkahhq
      181 icpkfpltcd gcgkkkiare kfqdhvrtcg rcrvpcrfha vgcpemvese kqqeheaqrl
      241 rehlalllgv lleagrppgd grpllgqgeg aweastpsra aellqrceal erktatfeni
      301 vcvlnrever vavtaeacgr qhrldqdrie alsnkvqqle rsiglkdlam adleqkvlem
      361 eastfdgvfi wkisdfsrkr qeavagrtpa ifspafytsr ygykmclray lngdgtgrgt
      421 hlslffvlmr gphdallrwp fnqkvtlmll dqnhrehvid afrpdvtsss fqrpvsdmni
      481 asgcplfcpv skmeaknsyv rddaifikai vdltgl
//
LOCUS       XP_061010135             504 aa            linear   MAM 02-DEC-2023
DEFINITION  UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 isoform X1
            [Dama dama].
ACCESSION   XP_061010135
VERSION     XP_061010135.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154152.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..504
                     /product="UDP-N-acetylhexosamine pyrophosphorylase-like
                     protein 1 isoform X1"
                     /calculated_mol_wt=55723
     Region          93..413
                     /region_name="UDPGlcNAc_PPase"
                     /note="UDPGlcNAc pyrophosphorylase catalayzes the
                     synthesis of UDPGlcNAc; cd04193"
                     /db_xref="CDD:133036"
     Site            order(111,113..114,168,199,223,225..226,254..255,292..293,
                     306..307,330,386,410)
                     /site_type="active"
                     /note="substrate binding site [active]"
                     /db_xref="CDD:133036"
     Site            order(118,288,306..308,376,401)
                     /site_type="active"
                     /note="dimerization interface [active]"
                     /db_xref="CDD:133036"
     CDS             1..504
                     /gene="UAP1L1"
                     /coded_by="XM_061154152.1:16..1530"
                     /db_xref="GeneID:133064271"
ORIGIN      
        1 maseadlrar lqragqqhll rfcaelapep raallaqlea lepealrqhc qraaaacarp
       61 pgpppglaar lqplppervg sageadpqtr rlweeeglhq ialnkvavll laggqgtrlg
      121 vtypkgmyqv glpsqktlyq lqaerirrve qlagerhgtr ctvpwyimts eftlgptakf
      181 fkehdffhld pnnvimfeqr mlpavtfdgr ailerkdkva mapdgnggly saledhqile
      241 dmerrgvefv hvycvdnilv rladpvfigf cvlrgadcga kvvekaypee pvgvvcqvdg
      301 vpqvveysei spevaqlrap gggllynagn icnhfftrdf lrmvtreleh llqphvavkk
      361 vpcvdehgnp vkplqpngik mekfvfdvlp faknfvafqv lreeefsplk nadsadrdsp
      421 stsrrallaq hcrwalqaga rfldvhgaql peqpslpgsa eppaiceisp lvsyagegle
      481 eylqgrefrp plildeatar elqp
//
LOCUS       XP_061010136             476 aa            linear   MAM 02-DEC-2023
DEFINITION  UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 isoform X2
            [Dama dama].
ACCESSION   XP_061010136
VERSION     XP_061010136.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154153.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..476
                     /product="UDP-N-acetylhexosamine pyrophosphorylase-like
                     protein 1 isoform X2"
                     /calculated_mol_wt=52496
     Region          69..385
                     /region_name="UDPGlcNAc_PPase"
                     /note="UDPGlcNAc pyrophosphorylase catalayzes the
                     synthesis of UDPGlcNAc; cd04193"
                     /db_xref="CDD:133036"
     Site            order(83,85..86,140,171,195,197..198,226..227,264..265,
                     278..279,302,358,382)
                     /site_type="active"
                     /note="substrate binding site [active]"
                     /db_xref="CDD:133036"
     Site            order(90,260,278..280,348,373)
                     /site_type="active"
                     /note="dimerization interface [active]"
                     /db_xref="CDD:133036"
     CDS             1..476
                     /gene="UAP1L1"
                     /coded_by="XM_061154153.1:16..1446"
                     /db_xref="GeneID:133064271"
ORIGIN      
        1 mrreghwreg wpsggpcwgs gsvrpgpals lpalsprtvv pgarcpgrrk hghwqgrtla
       61 spggwglggl hqialnkvav lllaggqgtr lgvtypkgmy qvglpsqktl yqlqaerirr
      121 veqlagerhg trctvpwyim tseftlgpta kffkehdffh ldpnnvimfe qrmlpavtfd
      181 grailerkdk vamapdgngg lysaledhqi ledmerrgve fvhvycvdni lvrladpvfi
      241 gfcvlrgadc gakvvekayp eepvgvvcqv dgvpqvveys eispevaqlr apgggllyna
      301 gnicnhfftr dflrmvtrel ehllqphvav kkvpcvdehg npvkplqpng ikmekfvfdv
      361 lpfaknfvaf qvlreeefsp lknadsadrd spstsrrall aqhcrwalqa garfldvhga
      421 qlpeqpslpg saeppaicei splvsyageg leeylqgref rpplildeat arelqp
//
LOCUS       XP_061010137             534 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 183 [Dama dama].
ACCESSION   XP_061010137
VERSION     XP_061010137.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154154.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..534
                     /product="coiled-coil domain-containing protein 183"
                     /calculated_mol_wt=62018
     CDS             1..534
                     /gene="CCDC183"
                     /coded_by="XM_061154154.1:1..1605"
                     /db_xref="GeneID:133064272"
ORIGIN      
        1 mkihkeaeme eqiqelktit rlqdqcralq iqsvkektvk nkatlallrs nirrksqewa
       61 lakkydqwti sracgkdvpm rlansrctme vareklrkyv fdrvnvhnvl ihlvrrrgrk
      121 lesmqlelag lksqpdatke elrlrqvirq lenniektti kittsqnihf lymdllghlk
      181 nklagyptel dklqnlvany cmelsdmtvm skdammitde vkmnmsqgea tfieerrare
      241 nrlnqqkkli dkihtketse kyrrgrqdld fpsnlmgpet lkvrkreask adveyqtnvt
      301 alvekvktav qcshlwdiag rflaqkstee dlelqmedce erraqlealm kkleieeaml
      361 kfrqtpssvs fksvekkmkd mlkeeedrlq lahsnmtksq kllltiqtgi dnlyirlmgi
      421 pppmgqkeaa psttldtysk laycegrlly ladrvqilag teevntkvrd alesstlkek
      481 qntrisfeem eedvietfqf advdhsyvps raeikrqgqr lieeklkvak kkkk
//
LOCUS       XP_061010139             495 aa            linear   MAM 02-DEC-2023
DEFINITION  ectonucleoside triphosphate diphosphohydrolase 2 [Dama dama].
ACCESSION   XP_061010139
VERSION     XP_061010139.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154156.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..495
                     /product="ectonucleoside triphosphate diphosphohydrolase
                     2"
                     /calculated_mol_wt=53732
     Region          37..449
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
     CDS             1..495
                     /gene="ENTPD2"
                     /coded_by="XM_061154156.1:24..1511"
                     /db_xref="GeneID:133064273"
ORIGIN      
        1 magkalsllp plllaaagla gllllcvptr direppalky givldagssh tsmfiykwpa
       61 dkendtgivg qhsscdvrgg gissyadnps gagqslvecl nqalrdvpke rhagtplylg
      121 atagmrllnl tspeasanvl aavtqtltqy pfdfrgaril sgqdegvfgw vtinyllenf
      181 ikygwvgrwf rprkgtlgam dlggastqit fetasptedp anevqlrlyg qryrvythsf
      241 lcygrdqvlr rllasavqtr gphpcwpqgy sthvmlrdvy espctatqrp qafnrsarvs
      301 lagssnpalc rglvsqlfns sscrfsrcsf ngifqppvag kfiafsaffy tvdflrtvmg
      361 lpvatlqqle aavvtvcsqt wselqarapd drarlpdyca gamfvqqlls rgygfdersf
      421 gdltfqkkag dtavgwalgy mlnltnlipa dppglrkgtd fsswvvllll faamllaafa
      481 lllqqarstk sasti
//
LOCUS       XP_061010140             488 aa            linear   MAM 02-DEC-2023
DEFINITION  dipeptidyl peptidase 2 [Dama dama].
ACCESSION   XP_061010140
VERSION     XP_061010140.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154157.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..488
                     /product="dipeptidyl peptidase 2"
                     /calculated_mol_wt=53526
     Region          43..470
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
     CDS             1..488
                     /gene="DPP7"
                     /coded_by="XM_061154157.1:74..1540"
                     /db_xref="GeneID:133064274"
ORIGIN      
        1 msphpwltlp walvlllglq lrglearahr lgdpefqeay feqlldhfnf erfgnktflq
       61 rflltekfwk rgegpiffyt gnegdvwsfa nnsgfilela aqqgalvvfa ehryygkslp
      121 fgerstgrgy telltveqal adfagllral rqeleapnap aiafggsygg mlsaylriky
      181 phlvagalaa sapvvsaagl gdpyqffqdv sadfqgqspe caravqdafr qirdlfqqga
      241 phvvsqefgt cqplsgpkdl tqlfgfarna ftvlammdyp yatdfvghlp ahpvqvgcsr
      301 llsessriag lralaglvyn ssgtepcyei ylqyqacadp tgcglgsdak awdyqactei
      361 nltfssnnvs dlfpelpfte aqrqqycldt wgvwprqdwl qtsfggadlt aasniifsng
      421 dldpwarggi qsnlsasvla itirggahhl dlrashpddp asvvearrle aaligkwvea
      481 argtrlre
//
LOCUS       XP_061010141             485 aa            linear   MAM 02-DEC-2023
DEFINITION  noelin isoform X1 [Dama dama].
ACCESSION   XP_061010141
VERSION     XP_061010141.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154158.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..485
                     /product="noelin isoform X1"
                     /calculated_mol_wt=55292
     Region          56..152
                     /region_name="Noelin-1"
                     /note="Neurogenesis glycoprotein; pfam12308"
                     /db_xref="CDD:432468"
     Region          <94..>218
                     /region_name="PRK03918"
                     /note="DNA double-strand break repair ATPase Rad50"
                     /db_xref="CDD:235175"
     Region          228..478
                     /region_name="OLF"
                     /note="Olfactomedin-like domains; smart00284"
                     /db_xref="CDD:128580"
     CDS             1..485
                     /gene="OLFM1"
                     /coded_by="XM_061154158.1:2..1459"
                     /db_xref="GeneID:133064275"
ORIGIN      
        1 msvpllkigv vlstmamitn wmsqtlpslv glnttklsaa sggtldrstg vlptnpeesw
       61 qvyssaqdse grcictvvap qqamcsrdar trqlrqllek vqnmsqsiev ldrrtqrdlq
      121 yvekmenqmk gleskfrqve eshkqhlarq fkaikakmde lrplipvlee ykadaklvlq
      181 fkeevqnlta vlnelqeeig aydydelqsr vsnleerlra cmqklacgkl tgisdpvtik
      241 tsgsrfgswm tdplapegdn rvwymdgyhn nrfvreyksm ldfmttdnft shrlphpwsg
      301 tgqvvyngsi yfnkfqshiv irfdlkteti lktrsldyag ynnmyhyawg ghsdidlmvd
      361 englwavyat nqnagnivis rldpvslqvl qtwntsypkr sageafiicg tlyvtngysg
      421 gtkvhyayqt nastyeyidi pfqnkyshis mldynpkdra lyawnnghqi lynvtlfhvi
      481 rsdel
//
LOCUS       XP_061010142             457 aa            linear   MAM 02-DEC-2023
DEFINITION  noelin isoform X2 [Dama dama].
ACCESSION   XP_061010142
VERSION     XP_061010142.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154159.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..457
                     /product="noelin isoform X2"
                     /calculated_mol_wt=52658
     Region          28..124
                     /region_name="Noelin-1"
                     /note="Neurogenesis glycoprotein; pfam12308"
                     /db_xref="CDD:432468"
     Region          <66..>190
                     /region_name="PRK03918"
                     /note="DNA double-strand break repair ATPase Rad50"
                     /db_xref="CDD:235175"
     Region          200..450
                     /region_name="OLF"
                     /note="Olfactomedin-like domains; smart00284"
                     /db_xref="CDD:128580"
     CDS             1..457
                     /gene="OLFM1"
                     /coded_by="XM_061154159.1:170..1543"
                     /db_xref="GeneID:133064275"
ORIGIN      
        1 mqparkllsl lflilmgtel tqvlptnpee swqvyssaqd segrcictvv apqqamcsrd
       61 artrqlrqll ekvqnmsqsi evldrrtqrd lqyvekmenq mkgleskfrq veeshkqhla
      121 rqfkaikakm delrplipvl eeykadaklv lqfkeevqnl tavlnelqee igaydydelq
      181 srvsnleerl racmqklacg kltgisdpvt iktsgsrfgs wmtdplapeg dnrvwymdgy
      241 hnnrfvreyk smldfmttdn ftshrlphpw sgtgqvvyng siyfnkfqsh ivirfdlkte
      301 tilktrsldy agynnmyhya wgghsdidlm vdenglwavy atnqnagniv isrldpvslq
      361 vlqtwntsyp krsageafii cgtlyvtngy sggtkvhyay qtnastyeyi dipfqnkysh
      421 ismldynpkd ralyawnngh qilynvtlfh virsdel
//
LOCUS       XP_061010143             449 aa            linear   MAM 02-DEC-2023
DEFINITION  ring finger protein-like [Dama dama].
ACCESSION   XP_061010143
VERSION     XP_061010143.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154160.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..449
                     /product="ring finger protein-like"
                     /calculated_mol_wt=46521
     Region          <104..276
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          276..325
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(277,280,295,297,300,303,320,323)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..449
                     /gene="LOC133064276"
                     /coded_by="XM_061154160.1:1..1350"
                     /db_xref="GeneID:133064276"
ORIGIN      
        1 mmrvpavcpp cavsalavrg kqerhparlm ltipyqlreq lpgtprregg gvawagekgc
       61 gsgwwggsvs ggptpgrrip vggvglacph ghclesswls lantgtaapa aglgqilset
      121 ahwaweppgh ggpsevssga hsqkeaavaa rsvpepapaa eghtdlqgps hpaatlgspp
      181 thpglcpggt apelcpgvpt ggpadlssgl tslppgpehl dpphqvlged gsgsgalgkp
      241 qgartpdsea llgamaaapp wtrytedeqa qqeaeecpvc mepcgpahrl tllncghglc
      301 tgclhrllat apgdlgrvcc plcrqktpml eweicqlqee llwadgpprp ppptpplpar
      361 rgrgpwasle hryqlrflpg avggrgclpf lpcppclgaw lwalrgrgpc arrlallsll
      421 alellglllv ftpllllgll fvlldgsrr
//
LOCUS       XP_061010144             394 aa            linear   MAM 02-DEC-2023
DEFINITION  suppressor APC domain-containing protein 2 [Dama dama].
ACCESSION   XP_061010144
VERSION     XP_061010144.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154161.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..394
                     /product="suppressor APC domain-containing protein 2"
                     /calculated_mol_wt=42390
     Region          227..306
                     /region_name="Suppressor_APC"
                     /note="Adenomatous polyposis coli tumour suppressor
                     protein; pfam11414"
                     /db_xref="CDD:463275"
     CDS             1..394
                     /gene="SAPCD2"
                     /coded_by="XM_061154161.1:16..1200"
                     /db_xref="GeneID:133064277"
ORIGIN      
        1 magaamaesg ggpppapgte glpraflqsl rtlfdilddr rrglvhlrei esrwrgadar
       61 elprgvlegl rqvapasgyl tferfvaglr talpsadggt raparaparg gcsvppggqp
      121 ppqrlvfapa deprtvlerk plllgarlpp agpgvasrnl ekpcgpaeaa pgpaeperpq
      181 gaalerspsk dsgavtcraw elgmgdapwg prargerrrh titngvdcdl lkqmrelqqe
      241 qevllqglem margrewyqq qlqrlqerqr glgqsraasd lgaegsprll gqllpkvqev
      301 arclgellaa acaaralpss ssapqgpesp sapdwqqqti lmlkeqnrll tqevtdkser
      361 itqleqeksa likqlfeara lsqqdtgpld stfm
//
LOCUS       XP_061010145             342 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-(1,3)-fucosyltransferase 7 [Dama dama].
ACCESSION   XP_061010145
VERSION     XP_061010145.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154162.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..342
                     /product="alpha-(1,3)-fucosyltransferase 7"
                     /calculated_mol_wt=38522
     Region          44..154
                     /region_name="Glyco_tran_10_N"
                     /note="Fucosyltransferase, N-terminal; pfam17039"
                     /db_xref="CDD:465336"
     Region          168..339
                     /region_name="Glyco_transf_10"
                     /note="Glycosyltransferase family 10 (fucosyltransferase)
                     C-term; pfam00852"
                     /db_xref="CDD:459962"
     CDS             1..342
                     /gene="FUT7"
                     /coded_by="XM_061154162.1:130..1158"
                     /db_xref="GeneID:133064278"
ORIGIN      
        1 mqnaglspap slralgglav aallsavwlw wrlgaapgga papqptitil vwhwpfasqp
       61 pelpgdtcar ygvarchlta nrsllagada vvfhhrelqt qrarlplaer prgqpwvwas
      121 mespshtrgl grlrgvfnwv lsyrrdsdif vpygrlepre gpppplpakr gvaawvisnf
      181 qkrqrrvqly rqlaphlqvd vfgravgqpl cadcllravg ryrfylsfen sehrdyitek
      241 fwrnalsaga vpvvlgppra ayeavappda fvhvddfgsa relaaflagm nescyrryfa
      301 wrdrfrvrlf sdwrerfcai carfpqlprg qvyqdlegwf qa
//
LOCUS       XP_061010147             342 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-(1,3)-fucosyltransferase 7 [Dama dama].
ACCESSION   XP_061010147
VERSION     XP_061010147.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154164.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..342
                     /product="alpha-(1,3)-fucosyltransferase 7"
                     /calculated_mol_wt=38522
     Region          44..154
                     /region_name="Glyco_tran_10_N"
                     /note="Fucosyltransferase, N-terminal; pfam17039"
                     /db_xref="CDD:465336"
     Region          168..339
                     /region_name="Glyco_transf_10"
                     /note="Glycosyltransferase family 10 (fucosyltransferase)
                     C-term; pfam00852"
                     /db_xref="CDD:459962"
     CDS             1..342
                     /gene="FUT7"
                     /coded_by="XM_061154164.1:146..1174"
                     /db_xref="GeneID:133064278"
ORIGIN      
        1 mqnaglspap slralgglav aallsavwlw wrlgaapgga papqptitil vwhwpfasqp
       61 pelpgdtcar ygvarchlta nrsllagada vvfhhrelqt qrarlplaer prgqpwvwas
      121 mespshtrgl grlrgvfnwv lsyrrdsdif vpygrlepre gpppplpakr gvaawvisnf
      181 qkrqrrvqly rqlaphlqvd vfgravgqpl cadcllravg ryrfylsfen sehrdyitek
      241 fwrnalsaga vpvvlgppra ayeavappda fvhvddfgsa relaaflagm nescyrryfa
      301 wrdrfrvrlf sdwrerfcai carfpqlprg qvyqdlegwf qa
//
LOCUS       XP_061010148             342 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-(1,3)-fucosyltransferase 7 [Dama dama].
ACCESSION   XP_061010148
VERSION     XP_061010148.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154165.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..342
                     /product="alpha-(1,3)-fucosyltransferase 7"
                     /calculated_mol_wt=38522
     Region          44..154
                     /region_name="Glyco_tran_10_N"
                     /note="Fucosyltransferase, N-terminal; pfam17039"
                     /db_xref="CDD:465336"
     Region          168..339
                     /region_name="Glyco_transf_10"
                     /note="Glycosyltransferase family 10 (fucosyltransferase)
                     C-term; pfam00852"
                     /db_xref="CDD:459962"
     CDS             1..342
                     /gene="FUT7"
                     /coded_by="XM_061154165.1:209..1237"
                     /db_xref="GeneID:133064278"
ORIGIN      
        1 mqnaglspap slralgglav aallsavwlw wrlgaapgga papqptitil vwhwpfasqp
       61 pelpgdtcar ygvarchlta nrsllagada vvfhhrelqt qrarlplaer prgqpwvwas
      121 mespshtrgl grlrgvfnwv lsyrrdsdif vpygrlepre gpppplpakr gvaawvisnf
      181 qkrqrrvqly rqlaphlqvd vfgravgqpl cadcllravg ryrfylsfen sehrdyitek
      241 fwrnalsaga vpvvlgppra ayeavappda fvhvddfgsa relaaflagm nescyrryfa
      301 wrdrfrvrlf sdwrerfcai carfpqlprg qvyqdlegwf qa
//
LOCUS       XP_061010149             321 aa            linear   MAM 02-DEC-2023
DEFINITION  neural proliferation differentiation and control protein 1 isoform
            X1 [Dama dama].
ACCESSION   XP_061010149
VERSION     XP_061010149.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154166.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..321
                     /product="neural proliferation differentiation and control
                     protein 1 isoform X1"
                     /calculated_mol_wt=34052
     Region          1..318
                     /region_name="NPDC1"
                     /note="Neural proliferation differentiation control-1
                     protein (NPDC1); pfam06809"
                     /db_xref="CDD:284276"
     CDS             1..321
                     /gene="NPDC1"
                     /coded_by="XM_061154166.1:149..1114"
                     /db_xref="GeneID:133064279"
ORIGIN      
        1 matpvpppsp rhlrllrlll sglvlgaalr gaaagrsdaa acpgsldcal krrarcppga
       61 hvcgpclqpf qedrqglcvp rmrqplgegl lrprleeeid flaqelarqg agrpglkapp
      121 qlegqqrppe adatlglser grgldlglps argapaptpr pslgpavssg pvhvsplepr
      181 ggrgdgltlv lilacsvaga aalavaalfw wrlqrdirlt qkadyaapqa psspappgis
      241 pgdqrlahsa emyhyqhqrq qmrclerhke ppkeldsvss deenedgdft vyecpglapt
      301 gemevrnplf dhaslsappl q
//
LOCUS       XP_061010150             276 aa            linear   MAM 02-DEC-2023
DEFINITION  neural proliferation differentiation and control protein 1 isoform
            X2 [Dama dama].
ACCESSION   XP_061010150
VERSION     XP_061010150.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154167.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..276
                     /product="neural proliferation differentiation and control
                     protein 1 isoform X2"
                     /calculated_mol_wt=29150
     Region          1..273
                     /region_name="NPDC1"
                     /note="Neural proliferation differentiation control-1
                     protein (NPDC1); pfam06809"
                     /db_xref="CDD:284276"
     CDS             1..276
                     /gene="NPDC1"
                     /coded_by="XM_061154167.1:148..978"
                     /db_xref="GeneID:133064279"
ORIGIN      
        1 matpvpppsp rhlrllrlll sglvlgaalr gaaagrsdaa acpgsldcal krrarcppga
       61 hvcgpclqpf qedrqglcvp rmrqpldatl glsergrgld lglpsargap aptprpslgp
      121 avssgpvhvs pleprggrgd gltlvlilac svagaaalav aalfwwrlqr dirltqkady
      181 aapqapsspa ppgispgdqr lahsaemyhy qhqrqqmrcl erhkeppkel dsvssdeene
      241 dgdftvyecp glaptgemev rnplfdhasl sapplq
//
LOCUS       XP_061010151             305 aa            linear   MAM 02-DEC-2023
DEFINITION  small ribosomal subunit protein uS2m isoform X1 [Dama dama].
ACCESSION   XP_061010151
VERSION     XP_061010151.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154168.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..305
                     /product="small ribosomal subunit protein uS2m isoform X1"
                     /calculated_mol_wt=33448
     Region          90..265
                     /region_name="RPS2"
                     /note="Ribosomal protein S2 (RPS2), involved in formation
                     of the translation initiation complex, where it might
                     contact the messenger RNA and several components of the
                     ribosome. It has been shown that in Escherichia coli RPS2
                     is essential for the binding of...; cd01425"
                     /db_xref="CDD:100106"
     Site            order(106..107,116..118,176,178..180,183..184,217,220)
                     /site_type="other"
                     /note="rRNA interaction site [nucleotide binding]"
                     /db_xref="CDD:100106"
     Site            order(219..220,222,236..239)
                     /site_type="active"
                     /note="S8 interaction site [active]"
                     /db_xref="CDD:100106"
     Site            254..259
                     /site_type="active"
                     /note="putative laminin-1 binding site [active]"
                     /db_xref="CDD:100106"
     CDS             1..305
                     /gene="MRPS2"
                     /coded_by="XM_061154168.1:16..933"
                     /db_xref="GeneID:133064280"
ORIGIN      
        1 mrardgepha phalprplef pprhragrgr rapncclegv saggrrdhgg rrhrhqpafs
       61 spdlsarils eplkhsdffn vkelfsvrsl fnarvhlghk agcrhrfmep yifgsrlgqd
      121 iidleqtaah lqlalnftah vayrggiilf vsrarqfshl ientarscge yahtryfkgg
      181 lltnaplllg pqvrlpdliv flhtlnnvfe phvavrdaak mniptvgivd tncnpclity
      241 pvpgnddspp avqlfcrlfq tavtrakekr rqlealyrlq gapgpcpadc aapgaqaglg
      301 lgvap
//
LOCUS       XP_061010152             288 aa            linear   MAM 02-DEC-2023
DEFINITION  small ribosomal subunit protein uS2m isoform X2 [Dama dama].
ACCESSION   XP_061010152
VERSION     XP_061010152.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154169.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..288
                     /product="small ribosomal subunit protein uS2m isoform X2"
                     /calculated_mol_wt=30965
     Region          73..248
                     /region_name="RPS2"
                     /note="Ribosomal protein S2 (RPS2), involved in formation
                     of the translation initiation complex, where it might
                     contact the messenger RNA and several components of the
                     ribosome. It has been shown that in Escherichia coli RPS2
                     is essential for the binding of...; cd01425"
                     /db_xref="CDD:100106"
     Site            order(89..90,99..101,159,161..163,166..167,200,203)
                     /site_type="other"
                     /note="rRNA interaction site [nucleotide binding]"
                     /db_xref="CDD:100106"
     Site            order(202..203,205,219..222)
                     /site_type="active"
                     /note="S8 interaction site [active]"
                     /db_xref="CDD:100106"
     Site            237..242
                     /site_type="active"
                     /note="putative laminin-1 binding site [active]"
                     /db_xref="CDD:100106"
     CDS             1..288
                     /gene="MRPS2"
                     /coded_by="XM_061154169.1:30..896"
                     /db_xref="GeneID:133064280"
ORIGIN      
        1 masgavlprl lgagvraapr graaprgrtl gnaaaaaape perdsdlsar ilseplkhsd
       61 ffnvkelfsv rslfnarvhl ghkagcrhrf mepyifgsrl gqdiidleqt aahlqlalnf
      121 tahvayrggi ilfvsrarqf shlientars cgeyahtryf kgglltnapl llgpqvrlpd
      181 livflhtlnn vfephvavrd aakmniptvg ivdtncnpcl itypvpgndd sppavqlfcr
      241 lfqtavtrak ekrrqlealy rlqgapgpcp adcaapgaqa glglgvap
//
LOCUS       XP_061010153             266 aa            linear   MAM 02-DEC-2023
DEFINITION  RING finger protein 208 [Dama dama].
ACCESSION   XP_061010153
VERSION     XP_061010153.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154170.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..266
                     /product="RING finger protein 208"
                     /calculated_mol_wt=28076
     Region          145..200
                     /region_name="RING-HC_RNF208"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 208 (RNF208) and similar proteins; cd16559"
                     /db_xref="CDD:438221"
     CDS             1..266
                     /gene="RNF208"
                     /coded_by="XM_061154170.1:25..825"
                     /db_xref="GeneID:133064281"
ORIGIN      
        1 mpadpgpeag ggwpgflmsc lkgphvilkm eamkmvhpek fpelqaaapc fppaprpapa
       61 lapkrawpsd teiivnqacg gdmpalegap ctpplprrpr kgsaelgfpr vapadevivn
      121 qyvirpgpaa pgapaaavaa aageplecpt cghtynatqr rprvlsclhs vceqclqily
      181 escpkykfis cptcrretvl ftdyglaala intsilsrlp pealtapsgg qwgsepegsc
      241 yqtfrqycga actchvrnpl sacsim
//
LOCUS       XP_061010154             230 aa            linear   MAM 02-DEC-2023
DEFINITION  complement component C8 gamma chain isoform X1 [Dama dama].
ACCESSION   XP_061010154
VERSION     XP_061010154.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154171.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..230
                     /product="complement component C8 gamma chain isoform X1"
                     /calculated_mol_wt=24867
     Region          74..226
                     /region_name="lipocalin_FABP"
                     /note="lipocalin/cytosolic fatty acid-binding protein
                     family; cl10502"
                     /db_xref="CDD:471979"
     Site            order(75,79,103,105,112,114,116,127,129,131,140,142,151,
                     153,155,164,166,168,175,177,179)
                     /site_type="other"
                     /note="ligand binding cavity [chemical binding]"
                     /db_xref="CDD:381182"
     CDS             1..230
                     /gene="C8G"
                     /coded_by="XM_061154171.1:159..851"
                     /db_xref="GeneID:133064282"
ORIGIN      
        1 mltpriaall tlllassslg qrarrpprpp spistiqpka sfdaqqvdlg gggagacpal
       61 sppalraltr papqfagtwl lvavaspcry lqeqghraea ttlhvaprgs amavstfrkl
      121 dgicwavrql ygdagrpgrf llqargargp vdvvvgdtdy rgfavlyler arqlsvklyv
      181 rslpvsdsfl svfeqrvqga nltedhilff pkygfcevad qfhtldevqr
//
LOCUS       XP_061010155             217 aa            linear   MAM 02-DEC-2023
DEFINITION  complement component C8 gamma chain isoform X2 [Dama dama].
ACCESSION   XP_061010155
VERSION     XP_061010155.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154172.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..217
                     /product="complement component C8 gamma chain isoform X2"
                     /calculated_mol_wt=23403
     Region          74..213
                     /region_name="lipocalin_FABP"
                     /note="lipocalin/cytosolic fatty acid-binding protein
                     family; cl10502"
                     /db_xref="CDD:471979"
     Site            order(75,79,103,105,112,114,116,127,129,131,140,142,151,
                     153,155,164,166,168,175,177,179)
                     /site_type="other"
                     /note="ligand binding cavity [chemical binding]"
                     /db_xref="CDD:381182"
     CDS             1..217
                     /gene="C8G"
                     /coded_by="XM_061154172.1:159..812"
                     /db_xref="GeneID:133064282"
ORIGIN      
        1 mltpriaall tlllassslg qrarrpprpp spistiqpka sfdaqqvdlg gggagacpal
       61 sppalraltr papqfagtwl lvavaspcry lqeqghraea ttlhvaprgs amavstfrkl
      121 dgicwavrql ygdagrpgrf llqargargp vdvvvgdtdy rgfavlyler arqlsvklyv
      181 rslpvsdsfl svfeqrvqga nltedhilff pkyevqr
//
LOCUS       XP_061010156             204 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133064284 isoform X1 [Dama dama].
ACCESSION   XP_061010156
VERSION     XP_061010156.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154173.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..204
                     /product="uncharacterized protein LOC133064284 isoform X1"
                     /calculated_mol_wt=21315
     CDS             1..204
                     /gene="LOC133064284"
                     /coded_by="XM_061154173.1:34..648"
                     /db_xref="GeneID:133064284"
ORIGIN      
        1 mtsgnpsrds sggavsstsl lallsaspwr rspwghrsgl raagsvlgrg cacpashppr
       61 plrarapcha rvagrgppch papsrpgqsp epgwgrpale geegrlqktg laggqlsslg
      121 csrwllhawv aagspreehl iplrlqprlv alstqpldlg arpsplpept lplsdlraar
      181 nqrnsslikh hlpqavdgsv isrv
//
LOCUS       XP_061010157             143 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133064284 isoform X2 [Dama dama].
ACCESSION   XP_061010157
VERSION     XP_061010157.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154174.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..143
                     /product="uncharacterized protein LOC133064284 isoform X2"
                     /calculated_mol_wt=15775
     CDS             1..143
                     /gene="LOC133064284"
                     /coded_by="XM_061154174.1:189..620"
                     /db_xref="GeneID:133064284"
ORIGIN      
        1 mrvwlegdlp atrpppgras lqspageglp lrgrkgdfrr rgwredssra wgpphnpcrc
       61 srwllhawva agspreehli plrlqprlva lstqpldlga rpsplpeptl plsdlraarn
      121 qrnsslikhh lpqavdgsvi srv
//
LOCUS       XP_061010159             161 aa            linear   MAM 02-DEC-2023
DEFINITION  14 kDa phosphohistidine phosphatase isoform X1 [Dama dama].
ACCESSION   XP_061010159
VERSION     XP_061010159.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154176.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..161
                     /product="14 kDa phosphohistidine phosphatase isoform X1"
                     /calculated_mol_wt=17252
     Region          6..>95
                     /region_name="Ocnus"
                     /note="Janus/Ocnus family (Ocnus); pfam05005"
                     /db_xref="CDD:428253"
     CDS             1..161
                     /gene="PHPT1"
                     /coded_by="XM_061154176.1:80..565"
                     /db_xref="GeneID:133064285"
ORIGIN      
        1 maaaglaqip dvdidsdgvf kyvlirvhaa ppsgtpaget keivrgykwa eyhadiydkv
       61 sgemqkkgyd ceclgggris hqsqdrkihv ygysmrrskp sirttksrgl ttateahsrp
      121 gpsssplrtl psrplprgrt appgtlpplp glgawassqe n
//
LOCUS       XP_061010160             125 aa            linear   MAM 02-DEC-2023
DEFINITION  14 kDa phosphohistidine phosphatase isoform X2 [Dama dama].
ACCESSION   XP_061010160
VERSION     XP_061010160.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154177.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..125
                     /product="14 kDa phosphohistidine phosphatase isoform X2"
                     /calculated_mol_wt=13735
     Region          6..117
                     /region_name="Ocnus"
                     /note="Janus/Ocnus family (Ocnus); pfam05005"
                     /db_xref="CDD:428253"
     CDS             1..125
                     /gene="PHPT1"
                     /coded_by="XM_061154177.1:76..453"
                     /db_xref="GeneID:133064285"
ORIGIN      
        1 maaaglaqip dvdidsdgvf kyvlirvhaa ppsgtpaget keivrgykwa eyhadiydkv
       61 sgemqkkgyd ceclgggris hqsqdrkihv ygysmgygra qhsvstekik akypdyevtw
      121 addgy
//
LOCUS       XP_061010161             193 aa            linear   MAM 02-DEC-2023
DEFINITION  epididymal-specific lipocalin-12 isoform X1 [Dama dama].
ACCESSION   XP_061010161
VERSION     XP_061010161.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154178.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..193
                     /product="epididymal-specific lipocalin-12 isoform X1"
                     /calculated_mol_wt=21500
     Region          32..193
                     /region_name="lipocalin_FABP"
                     /note="lipocalin/cytosolic fatty acid-binding protein
                     family; cl10502"
                     /db_xref="CDD:471979"
     Site            order(40,44,67,69,77,79,81,92,94,96,105,107,118,120,122,
                     131,133,135,146,148,150)
                     /site_type="other"
                     /note="ligand binding cavity [chemical binding]"
                     /db_xref="CDD:381182"
     CDS             1..193
                     /gene="LCN12"
                     /coded_by="XM_061154178.1:39..620"
                     /db_xref="GeneID:133064286"
ORIGIN      
        1 mgpwlalwvl lylprslqgq sphtpaapgs vlqsfedskf qgewfvlgla gnthtvadrs
       61 llspftatft lsknhrleva yamirgqrcv twsyklisks qpgmfsvdhs gepgadpeei
      121 qvtdtdyesf alllsrrqsd lqsilrvsll criwaiqtql ldkficlvra qglsddnivf
      181 pdvtdwsvlp ekc
//
LOCUS       XP_061010162             178 aa            linear   MAM 02-DEC-2023
DEFINITION  epididymal-specific lipocalin-12 isoform X2 [Dama dama].
ACCESSION   XP_061010162
VERSION     XP_061010162.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154179.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..178
                     /product="epididymal-specific lipocalin-12 isoform X2"
                     /calculated_mol_wt=19718
     Region          32..>146
                     /region_name="lipocalin_FABP"
                     /note="lipocalin/cytosolic fatty acid-binding protein
                     family; cl10502"
                     /db_xref="CDD:471979"
     Site            order(40,44,67,69,77,79,81,92,94,96,105,107,118,120,122,
                     131,133,135,146)
                     /site_type="other"
                     /note="ligand binding cavity [chemical binding]"
                     /db_xref="CDD:381182"
     CDS             1..178
                     /gene="LCN12"
                     /coded_by="XM_061154179.1:39..575"
                     /db_xref="GeneID:133064286"
ORIGIN      
        1 mgpwlalwvl lylprslqgq sphtpaapgs vlqsfedskf qgewfvlgla gnthtvadrs
       61 llspftatft lsknhrleva yamirgqrcv twsyklisks qpgmfsvdhs gepgadpeei
      121 qvtdtdyesf alllsrrqsd lqsilraeyg pfrpscwtss sawselrasq mttlssrt
//
LOCUS       XP_061010163             191 aa            linear   MAM 02-DEC-2023
DEFINITION  prostaglandin-H2 D-isomerase [Dama dama].
ACCESSION   XP_061010163
VERSION     XP_061010163.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154180.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..191
                     /product="prostaglandin-H2 D-isomerase"
                     /calculated_mol_wt=21031
     Region          30..187
                     /region_name="lipocalin_FABP"
                     /note="lipocalin/cytosolic fatty acid-binding protein
                     family; cl10502"
                     /db_xref="CDD:471979"
     Site            order(39,43,67,69,77,79,81,92,94,96,105,107,116,118,120,
                     129,131,133,145,147,149)
                     /site_type="other"
                     /note="ligand binding cavity [chemical binding]"
                     /db_xref="CDD:381182"
     CDS             1..191
                     /gene="PTGDS"
                     /coded_by="XM_061154180.1:69..644"
                     /db_xref="GeneID:133064287"
ORIGIN      
        1 matlnrlwmg llllgvlgvl qtpapaqatl qpnfqedkfl glwftsglas nsswflekkk
       61 vlsmcksvvg paadgglnlt stflrkdqce trtlllrpag ppgcysytsp hwssthevsv
      121 vetdyetyal lstesvrgpg qdfhmatlys rtqtpraevk ekfttfaksl gfteegivfl
      181 pktdkcmeeh t
//
LOCUS       XP_061010164             184 aa            linear   MAM 02-DEC-2023
DEFINITION  lipocalin-15-like [Dama dama].
ACCESSION   XP_061010164
VERSION     XP_061010164.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154181.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..184
                     /product="lipocalin-15-like"
                     /calculated_mol_wt=20157
     Region          32..174
                     /region_name="lipocalin_FABP"
                     /note="lipocalin/cytosolic fatty acid-binding protein
                     family; cl10502"
                     /db_xref="CDD:471979"
     Site            order(33,37,61,63,71,73,75,86,88,90,99,101,107,109,111,
                     120,122,124,135,137,139)
                     /site_type="other"
                     /note="ligand binding cavity [chemical binding]"
                     /db_xref="CDD:381182"
     CDS             1..184
                     /gene="LOC133064288"
                     /coded_by="XM_061154181.1:1..555"
                     /db_xref="GeneID:133064288"
ORIGIN      
        1 mgatllscvl lllwpssaqa dvlvqpdfda nkfsglwyvv smvsdckvfl gkkdhllmst
       61 rdikasaggn lnvhmefpre dgcnqvdaey lrvgsqghfr vpalgyldvr vvdtdyssfa
      121 vvyiykeleg alstmvqlys rtreaspqvl eafqnfyptv glsadmvaml pksdacfpgd
      181 rdap
//
LOCUS       XP_061010165             180 aa            linear   MAM 02-DEC-2023
DEFINITION  lipocalin-15 [Dama dama].
ACCESSION   XP_061010165
VERSION     XP_061010165.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154182.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..180
                     /product="lipocalin-15"
                     /calculated_mol_wt=19344
     Region          28..179
                     /region_name="lipocalin_FABP"
                     /note="lipocalin/cytosolic fatty acid-binding protein
                     family; cl10502"
                     /db_xref="CDD:471979"
     Site            order(33,37,60,62,69,71,73,84,86,88,97,99,106,108,110,119,
                     121,123,134,136,138)
                     /site_type="other"
                     /note="ligand binding cavity [chemical binding]"
                     /db_xref="CDD:381182"
     CDS             1..180
                     /gene="LCN15"
                     /coded_by="XM_061154182.1:1..543"
                     /db_xref="GeneID:133064289"
ORIGIN      
        1 mrgnlltall gllvvlaagk edlglqnfnl tqfsgmwyei alasnlehqs pspgrkvgav
       61 rveqdgaqls ltsvsdhmnl cvkeknqavk gdapgkfklp ldsggkeviv vatdyktyai
      121 mnivlhrggk pssvlklytr tldhnekate elvekaveqg lsvsdvqllt kdltcvnlls
//
LOCUS       XP_061010167             148 aa            linear   MAM 02-DEC-2023
DEFINITION  endothelial differentiation-related factor 1 [Dama dama].
ACCESSION   XP_061010167
VERSION     XP_061010167.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154184.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..148
                     /product="endothelial differentiation-related factor 1"
                     /calculated_mol_wt=16238
     Region          5..71
                     /region_name="MBF1"
                     /note="Multiprotein bridging factor 1; pfam08523"
                     /db_xref="CDD:462508"
     Region          76..132
                     /region_name="aMBF1"
                     /note="Archaeal ribosome-binding protein aMBF1, putative
                     translation factor, contains Zn-ribbon and HTH domains
                     [Translation, ribosomal structure and biogenesis];
                     COG1813"
                     /db_xref="CDD:441418"
     CDS             1..148
                     /gene="EDF1"
                     /coded_by="XM_061154184.1:111..557"
                     /db_xref="GeneID:133064290"
ORIGIN      
        1 maesdwdtvt vlrkkgptaa qakskqaila aqrrgedvet skkwaagqnk qhsitkntak
       61 ldreteelhh drvtlevgkv iqqgrqskgl tqkdlatkin ekpqviadye sgraipnnqv
      121 lgkieraigl klrgkdigkp iekgprak
//
LOCUS       XP_061010168             127 aa            linear   MAM 02-DEC-2023
DEFINITION  cysteine-rich tail protein 1 [Dama dama].
ACCESSION   XP_061010168
VERSION     XP_061010168.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154185.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..127
                     /product="cysteine-rich tail protein 1"
                     /calculated_mol_wt=13402
     Region          1..125
                     /region_name="DUF2477"
                     /note="Protein of unknown function (DUF2477); pfam10631"
                     /db_xref="CDD:463169"
     CDS             1..127
                     /gene="CYSRT1"
                     /coded_by="XM_061154185.1:925..1308"
                     /db_xref="GeneID:133064292"
ORIGIN      
        1 mdphemfvkn pyahisipra nlrpelgqql kaspssaesq plpvrsctle ppeegakgaa
       61 siwgqpaceq pcrpcgsgrr paglayagpp pvgrgddiah hccccpccsc chcprfcrch
      121 scccvvs
//
LOCUS       XP_061010169             136 aa            linear   MAM 02-DEC-2023
DEFINITION  piercer of microtubule wall 1 protein isoform X1 [Dama dama].
ACCESSION   XP_061010169
VERSION     XP_061010169.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154186.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..136
                     /product="piercer of microtubule wall 1 protein isoform
                     X1"
                     /calculated_mol_wt=15488
     Region          9..106
                     /region_name="DUF4490"
                     /note="Domain of unknown function (DUF4490); pfam14892"
                     /db_xref="CDD:434291"
     CDS             1..136
                     /gene="PIERCE1"
                     /coded_by="XM_061154186.1:240..650"
                     /db_xref="GeneID:133064293"
ORIGIN      
        1 mseedpqaca epeepkagpp pektsdyyrv sedlparfnn pawfrgyrtk eplsvyrtsn
       61 qaygsraptv hempkvfypn sykfsrqvaa ggmfqnntln vymeksivtg pdnyitsydr
      121 lnfhpsyrvc rpsicd
//
LOCUS       XP_061010170             136 aa            linear   MAM 02-DEC-2023
DEFINITION  piercer of microtubule wall 1 protein isoform X1 [Dama dama].
ACCESSION   XP_061010170
VERSION     XP_061010170.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154187.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..136
                     /product="piercer of microtubule wall 1 protein isoform
                     X1"
                     /calculated_mol_wt=15488
     Region          9..106
                     /region_name="DUF4490"
                     /note="Domain of unknown function (DUF4490); pfam14892"
                     /db_xref="CDD:434291"
     CDS             1..136
                     /gene="PIERCE1"
                     /coded_by="XM_061154187.1:434..844"
                     /db_xref="GeneID:133064293"
ORIGIN      
        1 mseedpqaca epeepkagpp pektsdyyrv sedlparfnn pawfrgyrtk eplsvyrtsn
       61 qaygsraptv hempkvfypn sykfsrqvaa ggmfqnntln vymeksivtg pdnyitsydr
      121 lnfhpsyrvc rpsicd
//
LOCUS       XP_061010171             135 aa            linear   MAM 02-DEC-2023
DEFINITION  piercer of microtubule wall 1 protein isoform X2 [Dama dama].
ACCESSION   XP_061010171
VERSION     XP_061010171.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154188.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..135
                     /product="piercer of microtubule wall 1 protein isoform
                     X2"
                     /calculated_mol_wt=15360
     Region          9..105
                     /region_name="DUF4490"
                     /note="Domain of unknown function (DUF4490); pfam14892"
                     /db_xref="CDD:434291"
     CDS             1..135
                     /gene="PIERCE1"
                     /coded_by="XM_061154188.1:242..649"
                     /db_xref="GeneID:133064293"
ORIGIN      
        1 mseedpqaca epeepkagpp pektsdyyrv sedlparfnn pawfrgyrtk eplsvyrtsn
       61 qaygsraptv hempvfypns ykfsrqvaag gmfqnntlnv ymeksivtgp dnyitsydrl
      121 nfhpsyrvcr psicd
//
LOCUS       XP_061010172             131 aa            linear   MAM 02-DEC-2023
DEFINITION  piercer of microtubule wall 1 protein isoform X3 [Dama dama].
ACCESSION   XP_061010172
VERSION     XP_061010172.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154189.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..131
                     /product="piercer of microtubule wall 1 protein isoform
                     X3"
                     /calculated_mol_wt=14565
     Region          9..>77
                     /region_name="DUF4490"
                     /note="Domain of unknown function (DUF4490); pfam14892"
                     /db_xref="CDD:434291"
     CDS             1..131
                     /gene="PIERCE1"
                     /coded_by="XM_061154189.1:245..640"
                     /db_xref="GeneID:133064293"
ORIGIN      
        1 mseedpqaca epeepkagpp pektsdyyrv sedlparfnn pawfrgyrtk eplsvyrtsn
       61 qaygsraptv hempgifpiq rsnpcllcll cwlvasvpae ppgkpvawft tsertgpihl
      121 ydeptlvgsr f
//
LOCUS       XP_061010173             113 aa            linear   MAM 02-DEC-2023
DEFINITION  piercer of microtubule wall 1 protein isoform X4 [Dama dama].
ACCESSION   XP_061010173
VERSION     XP_061010173.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154190.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..113
                     /product="piercer of microtubule wall 1 protein isoform
                     X4"
                     /calculated_mol_wt=12551
     Region          9..>74
                     /region_name="DUF4490"
                     /note="Domain of unknown function (DUF4490); pfam14892"
                     /db_xref="CDD:434291"
     CDS             1..113
                     /gene="PIERCE1"
                     /coded_by="XM_061154190.1:244..585"
                     /db_xref="GeneID:133064293"
ORIGIN      
        1 mseedpqaca epeepkagpp pektsdyyrv sedlparfnn pawfrgyrtk eplsvyrtsn
       61 qaygsraptv hemphtlket ippgavmvda crssflcynp ectarkvgps vwc
//
LOCUS       XP_061010174             136 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 203 [Dama dama].
ACCESSION   XP_061010174
VERSION     XP_061010174.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154191.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..136
                     /product="transmembrane protein 203"
                     /calculated_mol_wt=15615
     Region          3..135
                     /region_name="TMEM203"
                     /note="Transmembrane protein 203; cd22816"
                     /db_xref="CDD:439364"
     CDS             1..136
                     /gene="TMEM203"
                     /coded_by="XM_061154191.1:126..536"
                     /db_xref="GeneID:133064294"
ORIGIN      
        1 mlfslrelvq wlgfatfeif vhllallvfs vllalrvdgl apglswwnvf vpffaadgls
       61 tyfttivsvr lfqdgekrla vlrlfwvltv lslkfvfeml lcqklveqtr elwfglitsp
      121 vfillqllmi racrvn
//
LOCUS       XP_061010176             119 aa            linear   MAM 02-DEC-2023
DEFINITION  microtubule nucleation factor SSNA1 [Dama dama].
ACCESSION   XP_061010176
VERSION     XP_061010176.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154193.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..119
                     /product="microtubule nucleation factor SSNA1"
                     /calculated_mol_wt=13454
     Region          <1..>111
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..119
                     /gene="SSNA1"
                     /coded_by="XM_061154193.1:70..429"
                     /db_xref="GeneID:133064295"
ORIGIN      
        1 mtqqgaalqn ynnelvkcie elcqkreelc rqiqqeedek qrlqnevrql teklarvnen
       61 larkiasrne fdrtiaetea aylkilessq tllsvlkrea gnltkatase qkssggkes
//
LOCUS       XP_061010177             108 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 141 isoform X1 [Dama dama].
ACCESSION   XP_061010177
VERSION     XP_061010177.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154194.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..108
                     /product="transmembrane protein 141 isoform X1"
                     /calculated_mol_wt=11789
     Region          6..96
                     /region_name="TMEM141"
                     /note="TMEM141 protein family; pfam15110"
                     /db_xref="CDD:464509"
     CDS             1..108
                     /gene="TMEM141"
                     /coded_by="XM_061154194.1:73..399"
                     /db_xref="GeneID:133064296"
ORIGIN      
        1 mvnlglsrvd davaskhpgl geyaacqsna fvkgvstfvt gtgatfglqm lvqrrlpfpf
       61 qwkvlvavva gsvasywvtr vesqkcsdlw lfletgrlpr dmhtdrrs
//
LOCUS       XP_061010178             108 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 141 isoform X2 [Dama dama].
ACCESSION   XP_061010178
VERSION     XP_061010178.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154195.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..108
                     /product="transmembrane protein 141 isoform X2"
                     /calculated_mol_wt=11676
     Region          6..96
                     /region_name="TMEM141"
                     /note="TMEM141 protein family; pfam15110"
                     /db_xref="CDD:464509"
     CDS             1..108
                     /gene="TMEM141"
                     /coded_by="XM_061154195.1:73..399"
                     /db_xref="GeneID:133064296"
ORIGIN      
        1 mvnlglsrvd davaskhpgl geyaacqsna fvkgvstfvt gtgatfglqm lvqrrlpfpf
       61 qwkvlvavva gsvasywvtr vesqkcsdlw lfletgrlpr dmhteegs
//
LOCUS       XP_061010179             208 aa            linear   MAM 02-DEC-2023
DEFINITION  protein PAXX [Dama dama].
ACCESSION   XP_061010179
VERSION     XP_061010179.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154196.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..208
                     /product="protein PAXX"
                     /calculated_mol_wt=21835
     Region          10..208
                     /region_name="PAXX"
                     /note="PAralog of XRCC4 and XLF, also called C9orf142;
                     pfam15384"
                     /db_xref="CDD:464691"
     CDS             1..208
                     /gene="PAXX"
                     /coded_by="XM_061154196.1:172..798"
                     /db_xref="GeneID:133064297"
ORIGIN      
        1 mvppprwppl ctlppgpgpp rfvcycegeg ggpgehggfn lcvtdaaelw stcftpdrla
       61 alkarfglsa tedialrfra acerqavtlt lqedrasltl sggpsvleld lskvpgpeaa
      121 srlqaltldl aervcsleqr laaaaaeema tsprksawqa gphlflpdpd pqrggpgpgv
      181 krrcpgesli npgfkskkpa ggvdfddp
//
LOCUS       XP_061010180             973 aa            linear   MAM 02-DEC-2023
DEFINITION  glutamate receptor ionotropic, NMDA 1 isoform X1 [Dama dama].
ACCESSION   XP_061010180
VERSION     XP_061010180.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154197.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..973
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..973
                     /product="glutamate receptor ionotropic, NMDA 1 isoform
                     X1"
                     /calculated_mol_wt=108694
     Region          25..383
                     /region_name="PBP1_iGluR_NMDA_NR1"
                     /note="N-terminal leucine-isoleucine-valine-binding
                     protein (LIVBP)-like domain of the NR1, an essential
                     channel-forming subunit of the NMDA receptor; cd06379"
                     /db_xref="CDD:380602"
     Site            order(69..72,76,79,113,319,323,342)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:380602"
     Site            order(69..73,75..76,79..80,113..114,131,135,308..310,
                     319..320,322..323)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:380602"
     Region          395..834
                     /region_name="PBP2_iGluR_NMDA_Nr1"
                     /note="The ligand-binding domain of the NR1 subunit of
                     ionotropic NMDA (N-methyl-D-aspartate) glutamate
                     receptors, a member of the type 2 periplasmic binding fold
                     protein superfamily; cd13719"
                     /db_xref="CDD:270437"
     Site            order(516..519,521,523..525,668,722..723,727,767,788..790,
                     793,799,815..818,821)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:270437"
     Site            order(516..518,523,722..724,766..767)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:270437"
     Region          560..858
                     /region_name="Lig_chan"
                     /note="Ligand-gated ion channel; pfam00060"
                     /db_xref="CDD:459656"
     Region          870..898
                     /region_name="CaM_bdg_C0"
                     /note="Calmodulin-binding domain C0 of NMDA receptor NR1
                     subunit; pfam10562"
                     /db_xref="CDD:402271"
     CDS             1..973
                     /gene="GRIN1"
                     /coded_by="XM_061154197.1:122..3043"
                     /db_xref="GeneID:133064298"
ORIGIN      
        1 mstmrlltla llfscsfara acdpkivnig avlstrkheq mfreavnqan krhgswkiql
       61 natsvthkpn aiqmalsvce dlissqvyai lvshpptpnd hftptpvsyt agfyripvlg
      121 lttrmsiysd ksihlsflrt vppyshqssv wfemmrvysw nhvillvsdd hegraaqkrl
      181 etlleeresk aekvlqfdpg tknvtallme arelearvii lsaseddaat vyraaamlnm
      241 tgsgyvwlvg ereisgnalr yapdgiiglq lingknesah isdavgvvaq avhelleken
      301 itdpprgcvg ntniwktgpl fkrvlmssky tdgvtgrvef nedgdrkfan ysimnlqnrk
      361 lvqvgiyngt hvipndrkii wpggetekpr gyqmstrlki vtihqepfvy vkptlsdgtc
      421 keeftvngdp vkkvictgpn dtspgsprht vpqccygfci dlliklartm nftyevhlva
      481 dgkfgtqerv nnsnkkewng mmgellsgqa dmivapltin neraqyiefs kpfkyqglti
      541 lvkkeiprst ldsfmqpfqs tlwllvglsv hvvavmlyll drfspfgrfk vnseeeeeda
      601 ltlssamwfs wgvllnsgig egaprsfsar ilgmvwagfa miivasytan laaflvldrp
      661 eeritgindp rvrlgpaggw ggrrsgpppl gvgpgsshep gsltpqlrnp sdkfiyatvk
      721 qssvdiyfrr qvelstmyrh mekhnyesaa eaiqavrdnk lhafiwdsav lefeasqkcd
      781 lvttgelffr sgfgigmrkd spwkqnvsls ilkshengfm edldktwvry qecdsrsnap
      841 atltfenmag vfmlvaggiv agiflifiei aykrhkdarr kqmqlafaav nvwrknlqdr
      901 ksgraepdpk kkatfraits tlassfkrrr sskdtstggg rgalqnqkdt vlprraiere
      961 egqlqmcarh res
//
LOCUS       XP_061010181             957 aa            linear   MAM 02-DEC-2023
DEFINITION  glutamate receptor ionotropic, NMDA 1 isoform X2 [Dama dama].
ACCESSION   XP_061010181
VERSION     XP_061010181.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154198.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..957
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..957
                     /product="glutamate receptor ionotropic, NMDA 1 isoform
                     X2"
                     /calculated_mol_wt=106798
     Region          25..383
                     /region_name="PBP1_iGluR_NMDA_NR1"
                     /note="N-terminal leucine-isoleucine-valine-binding
                     protein (LIVBP)-like domain of the NR1, an essential
                     channel-forming subunit of the NMDA receptor; cd06379"
                     /db_xref="CDD:380602"
     Site            order(69..72,76,79,113,319,323,342)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:380602"
     Site            order(69..73,75..76,79..80,113..114,131,135,308..310,
                     319..320,322..323)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:380602"
     Region          395..834
                     /region_name="PBP2_iGluR_NMDA_Nr1"
                     /note="The ligand-binding domain of the NR1 subunit of
                     ionotropic NMDA (N-methyl-D-aspartate) glutamate
                     receptors, a member of the type 2 periplasmic binding fold
                     protein superfamily; cd13719"
                     /db_xref="CDD:270437"
     Site            order(516..519,521,523..525,668,722..723,727,767,788..790,
                     793,799,815..818,821)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:270437"
     Site            order(516..518,523,722..724,766..767)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:270437"
     Region          560..858
                     /region_name="Lig_chan"
                     /note="Ligand-gated ion channel; pfam00060"
                     /db_xref="CDD:459656"
     Region          870..898
                     /region_name="CaM_bdg_C0"
                     /note="Calmodulin-binding domain C0 of NMDA receptor NR1
                     subunit; pfam10562"
                     /db_xref="CDD:402271"
     CDS             1..957
                     /gene="GRIN1"
                     /coded_by="XM_061154198.1:122..2995"
                     /db_xref="GeneID:133064298"
ORIGIN      
        1 mstmrlltla llfscsfara acdpkivnig avlstrkheq mfreavnqan krhgswkiql
       61 natsvthkpn aiqmalsvce dlissqvyai lvshpptpnd hftptpvsyt agfyripvlg
      121 lttrmsiysd ksihlsflrt vppyshqssv wfemmrvysw nhvillvsdd hegraaqkrl
      181 etlleeresk aekvlqfdpg tknvtallme arelearvii lsaseddaat vyraaamlnm
      241 tgsgyvwlvg ereisgnalr yapdgiiglq lingknesah isdavgvvaq avhelleken
      301 itdpprgcvg ntniwktgpl fkrvlmssky tdgvtgrvef nedgdrkfan ysimnlqnrk
      361 lvqvgiyngt hvipndrkii wpggetekpr gyqmstrlki vtihqepfvy vkptlsdgtc
      421 keeftvngdp vkkvictgpn dtspgsprht vpqccygfci dlliklartm nftyevhlva
      481 dgkfgtqerv nnsnkkewng mmgellsgqa dmivapltin neraqyiefs kpfkyqglti
      541 lvkkeiprst ldsfmqpfqs tlwllvglsv hvvavmlyll drfspfgrfk vnseeeeeda
      601 ltlssamwfs wgvllnsgig egaprsfsar ilgmvwagfa miivasytan laaflvldrp
      661 eeritgindp rvrlgpaggw ggrrsgpppl gvgpgsshep gsltpqlrnp sdkfiyatvk
      721 qssvdiyfrr qvelstmyrh mekhnyesaa eaiqavrdnk lhafiwdsav lefeasqkcd
      781 lvttgelffr sgfgigmrkd spwkqnvsls ilkshengfm edldktwvry qecdsrsnap
      841 atltfenmag vfmlvaggiv agiflifiei aykrhkdarr kqmqlafaav nvwrknlqdr
      901 ksgraepdpk kkatfraits tlassfkrrr sskdtqyhpt ditgplnlsd psvstvv
//
LOCUS       XP_061010182             232 aa            linear   MAM 02-DEC-2023
DEFINITION  epididymal-specific lipocalin-6 [Dama dama].
ACCESSION   XP_061010182
VERSION     XP_061010182.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154199.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..232
                     /product="epididymal-specific lipocalin-6"
                     /calculated_mol_wt=25044
     Region          82..215
                     /region_name="lipocalin_FABP"
                     /note="lipocalin/cytosolic fatty acid-binding protein
                     family; cl10502"
                     /db_xref="CDD:471979"
     Site            order(83,87,111,113,121,123,125,138,140,142,151,153,157,
                     159,161,170,172,174,185,187,189)
                     /site_type="other"
                     /note="ligand binding cavity [chemical binding]"
                     /db_xref="CDD:381182"
     CDS             1..232
                     /gene="LCN6"
                     /coded_by="XM_061154199.1:1..699"
                     /db_xref="GeneID:133064299"
ORIGIN      
        1 msavllaall avvsapsara vwlgrldpqq vmaplrrrgs gatcilgplw slgspgapqt
       61 tgaaggwagv ggtaphlqpl pqlmgswyvl avasgekdfa lekatksveg vevmltsqnt
      121 lkmrasrhrm erchlqavel qrqnsgwvfg npslgvleyr vlgtnfrdya ivftqleaqe
      181 eafstvelys rtalasqeal grfakwsrsl gflsqqqael qrdftcahkv fl
//
LOCUS       XP_061010184            1854 aa            linear   MAM 02-DEC-2023
DEFINITION  collagen alpha-1(V) chain isoform X1 [Dama dama].
ACCESSION   XP_061010184
VERSION     XP_061010184.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154201.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1854
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1854
                     /product="collagen alpha-1(V) chain isoform X1"
                     /calculated_mol_wt=185326
     Region          42..233
                     /region_name="TSPN"
                     /note="Thrombospondin N-terminal -like domains;
                     smart00210"
                     /db_xref="CDD:214560"
     Region          <598..>949
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          <842..>1089
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          <995..>1229
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          <1375..>1591
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          1623..1852
                     /region_name="COLFI"
                     /note="Fibrillar collagen C-terminal domain; pfam01410"
                     /db_xref="CDD:460199"
     CDS             1..1854
                     /gene="COL5A1"
                     /coded_by="XM_061154201.1:42..5606"
                     /db_xref="GeneID:133064302"
ORIGIN      
        1 mdvhtrwkar splhpgasll spppllllll lwasppsraa qpadllkvld fhnlpdgitk
       61 ttgfcaarrs skgpdvayrv tkdaqlsapt kqlypasafp edfsilttvk akkgsqaflv
      121 siyneqgiqq iglemgrspv flyedhtgkp gpedyplfrg inlsdgkwhr ialsvhkknv
      181 tlildckkkt tkfldrsdnp vidvngiivf gtrildeevf egdiqqlllv sdhraaydyc
      241 ehyspdcdta vpdkpqsqdp npdeyypdgd negdtyyyey pyyedtddtg kdpvptktpv
      301 eaaretteva eeltqpptea psapdttvgp gkeeedpgig eydyvpsedy ytpppyedfg
      361 ygegienpde npdenpdqnp dqspdqgara evptstvlts ngsnpapppe egmddlegef
      421 teetiknlde syydpyydpt ispseigpgm panqdtiyeg iggprgekgq kgepaiiepg
      481 mllegppgpe gpaglpgppg tmgptgqvgd pgergppgrp glpgadglpg ppgtmlmlpf
      541 rfggggdags kgpmvsaqes qaqailqqar lalrgpagpm gltgrpgpmg ppgsgglkge
      601 pgdmgpqgpr gvqgppgpag kpgrrgrags dgargmpgqt gpkgdrgfdg laglpgekgh
      661 rgdpgpsgpp gppgedgerg ddgevgprgl pgepgprgll gpkgppgppg ppgvtgmdgq
      721 pgpkgnvgpq gepgppgqqg npgaqglpgp qgaigppgek gplgkpglpg mpgadgppgh
      781 pgkegppgek ggqgppgpqg pigypgprgv kgadgirglk gtkgekgedg fpgfkgdmgi
      841 kgdrgeigpp gprgedgpeg pkgrggpngd pgplgppgek gklgvpglpg ypgrqgpkgs
      901 igfpgfpgan gekggrgtpg kpgprgqrgp tgprgergpr gitgkpgpkg nsggdgpagp
      961 pgergpngpq gptgfpgpkg ppgppgkdgl pghpgqrget gfqgktgppg ppgvvgpqgp
     1021 tgetgpmger ghpgppgppg eqglpglagk egtkgdpgpa glpgkdgppg lrgfpgdrgl
     1081 pgpvgalglk gsegppgppg pagspgergp agaagpigip grpgpqgppg pagekgapge
     1141 kgpqgpagrd glqgpvglpg pagpvgppge dgdkgeigep gqkgskgdkg eqgppgptgp
     1201 qgpigqpgps gadgepgprg qqglfgqkgd egprgfpgpp gpvglqglpg ppgekgetgd
     1261 vgqmgppgpp gprgpsgapg adgpqgppgg ignpgavgek gepgeagepg lpgeggppgp
     1321 kgergekges gpsgaagppg pkgppgddgp kgspgpvgfp gdpgppgepg pagqdgppgd
     1381 kgddgepgqt gspgptgepg psgppgkrgp pgpagpegrq gekgakgeag legppgktgp
     1441 igpqgapgkp gpdglrgipg pvgeqglpga pgpdgppgpm gppglpglkg dsgpkgekgh
     1501 pgligligpp geqgekgdrg lpgpqgssgp kgeqgitgps gpigppgppg lpgppgpkga
     1561 kgssgptgpk geagqpgppg ppgppgeviq plpiqasrtr rnidasqlmd daegeqymdy
     1621 adgmeeifgs lnslkleieq mkrplgtpqn partckdlql chpdfpdgey wvdpnqgcsr
     1681 dsfkvycnft aggstcvfpd kksegarits wpkenpgswf sefkrgklls yvdaegspvg
     1741 vvqmtflrll sasahqnity ncyqsvawqd aatgsydkam rflgsndeem sydnspyira
     1801 lvdgcatkkg yqktvleidt pkveqlpivd imfndfgeas qkfgfevgpa cflg
//
LOCUS       XP_061010185            1854 aa            linear   MAM 02-DEC-2023
DEFINITION  collagen alpha-1(V) chain isoform X2 [Dama dama].
ACCESSION   XP_061010185
VERSION     XP_061010185.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154202.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1854
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1854
                     /product="collagen alpha-1(V) chain isoform X2"
                     /calculated_mol_wt=185431
     Region          42..233
                     /region_name="TSPN"
                     /note="Thrombospondin N-terminal -like domains;
                     smart00210"
                     /db_xref="CDD:214560"
     Region          <598..>949
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          <842..>1089
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          <995..>1229
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          <1375..>1591
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          1623..1852
                     /region_name="COLFI"
                     /note="Fibrillar collagen C-terminal domain; pfam01410"
                     /db_xref="CDD:460199"
     CDS             1..1854
                     /gene="COL5A1"
                     /coded_by="XM_061154202.1:42..5606"
                     /db_xref="GeneID:133064302"
ORIGIN      
        1 mdvhtrwkar splhpgasll spppllllll lwasppsraa qpadllkvld fhnlpdgitk
       61 ttgfcaarrs skgpdvayrv tkdaqlsapt kqlypasafp edfsilttvk akkgsqaflv
      121 siyneqgiqq iglemgrspv flyedhtgkp gpedyplfrg inlsdgkwhr ialsvhkknv
      181 tlildckkkt tkfldrsdnp vidvngiivf gtrildeevf egdiqqlllv sdhraaydyc
      241 ehyspdcdta vpdkpqsqdp npdeyypdgd negdtyyyey pyyedtddtg kdpvptktpv
      301 eaaretteva eeltqpptea psapdttvgp gkeeedpgig eydyvpsedy ytpppyedfg
      361 ygegienpde npdenpdqnp dqspdqgara evptstvlts ngsnpapppe egmddlegef
      421 teetiknlde syydpyydpt ispseigpgm panqdtiyeg iggprgekgq kgepaiiepg
      481 mllegppgpe gpaglpgppg tmgptgqvgd pgergppgrp glpgadglpg ppgtmlmlpf
      541 rfggggdags kgpmvsaqes qaqailqqar lalrgpagpm gltgrpgpmg ppgsgglkge
      601 pgdmgpqgpr gvqgppgpag kpgrrgrags dgargmpgqt gpkgdrgfdg laglpgekgh
      661 rgdpgpsgpp gppgedgerg ddgevgprgl pgepgprgll gpkgppgppg ppgvtgmdgq
      721 pgpkgnvgpq gepgppgqqg npgaqglpgp qgaigppgek gplgkpglpg mpgadgppgh
      781 pgkegppgek ggqgppgpqg pigypgprgv kgadgirglk gtkgekgedg fpgfkgdmgi
      841 kgdrgeigpp gprgedgpeg pkgrggpngd pgplgppgek gklgvpglpg ypgrqgpkgs
      901 igfpgfpgan gekggrgtpg kpgprgqrgp tgprgergpr gitgkpgpkg nsggdgpagp
      961 pgergpngpq gptgfpgpkg ppgppgkdgl pghpgqrget gfqgktgppg ppgvvgpqgp
     1021 tgetgpmger ghpgppgppg eqglpglagk egtkgdpgpa glpgkdgppg lrgfpgdrgl
     1081 pgpvgalglk gsegppgppg pagspgergp agaagpigip grpgpqgppg pagekgapge
     1141 kgpqgpagrd glqgpvglpg pagpvgppge dgdkgeigep gqkgskgdkg eqgppgptgp
     1201 qgpigqpgps gadgepgprg qqglfgqkgd egprgfpgpp gpvglqglpg ppgekgetgd
     1261 vgqmgppgpp gprgpsgapg adgpqgppgg ignpgavgek gepgeagepg lpgeggppgp
     1321 kgergekges gpsgaagppg pkgppgddgp kgspgpvgfp gdpgppgepg pagqdgppgd
     1381 kgddgepgqt gspgptgepg psgppgkrgp pgpagpegrq gekgakgeag legppgktgp
     1441 igpqgapgkp gpdglrgipg pvgeqglpga pgpdgppgpm gppglpglkg dsgpkgekgh
     1501 pgligligpp geqgekgdrg lpgpqgssgp kgeqgitgps gpigppgppg lpgppgpkga
     1561 kgssgptgpk geagqpgppg ppgppgeviq plpiqasrtr rnidasqlmd daegeqymdy
     1621 adgmeeifgs lnslkleieq mkrplgtpqn partckdlql chpdfpdgey wvdpnqgcsr
     1681 dsfkvycnft aggstcvfpd kksegsrmar wpkeqpatwy sqykrgslls yvdaegspvg
     1741 vvqmtflrll sasahqnity ncyqsvawqd aatgsydkam rflgsndeem sydnspyira
     1801 lvdgcatkkg yqktvleidt pkveqlpivd imfndfgeas qkfgfevgpa cflg
//
LOCUS       XP_061010186             955 aa            linear   MAM 02-DEC-2023
DEFINITION  ADAMTS-like protein 2 [Dama dama].
ACCESSION   XP_061010186
VERSION     XP_061010186.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154203.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..955
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..955
                     /product="ADAMTS-like protein 2"
                     /calculated_mol_wt=104571
     Region          50..106
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          <167..213
                     /region_name="ADAMTS_CR_3"
                     /note="ADAMTS cysteine-rich domain; pfam19236"
                     /db_xref="CDD:437068"
     Region          216..330
                     /region_name="ADAMTS_spacer1"
                     /note="ADAM-TS Spacer 1; pfam05986"
                     /db_xref="CDD:461796"
     Region          630..689
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          693..741
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          745..798
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          802..858
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          861..911
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          920..951
                     /region_name="PLAC"
                     /note="PLAC (protease and lacunin) domain; pfam08686"
                     /db_xref="CDD:462560"
     CDS             1..955
                     /gene="ADAMTSL2"
                     /coded_by="XM_061154203.1:125..2992"
                     /db_xref="GeneID:133064303"
ORIGIN      
        1 megrwqpscw awsllamalv tgsvsstgtt dnsptsnsle vgpdatayww gewtkwtacs
       61 rscgagvtsq erhclqqrkt svtgagnrtc tgtskryqlc rvqecppdgr sfreeqcisf
      121 nsrvyngrth qwkplypddy vhisskpcdl hcttvdgqrq lmvpardgts ckladlrgvc
      181 vsgkcepigc dgvlfsthtl dkcgvcqgdg sscthvtgny rkgnahlgys lvthipagar
      241 diqiverkks advlaladea gyfffngnfk vdspknfnia gtvvkyrrpm dvyetgieyi
      301 vaqgpttqgl nvmvwnqngk spsitfeytl lqpphahrlq piyysfsdpa sdsvesqeld
      361 gaglvgflqh naslfgqass erlgldnrlf ghrgpgielg lsrgqetnev caqasgrace
      421 gpprgkgfrd gnatrtalag dpddreadar fasqellspn aisdqllgag sdsrelplne
      481 tvnsifaqga prgspaesly ldyeesegag ayllngsyle lssdrvants seapfpnasa
      541 slpalagnrt qkartrpksr kqgvspadmy rwklsshepc sstcttgvms tyamcvrydg
      601 ievddsycda ltrpepvqef cagrecqprw etsswsecsr tcgegyqsri vrcwkmlspg
      661 fdssvysdlc eaaeavrpee rktcrnpacg pqwemsewse ctakcgersv vtrdircsed
      721 eklcdpstrp vgekdctgpp cdrqwtvsdw gpcsgscgqg rmirhvyckt sdgrvvpesq
      781 cqmetkplai hpcgdkncpa hwlaqdwerc nttcgrgvkk rlvlcmelan gkpqtrsgpe
      841 cglakkppee stcferpcfk wytspwsect ktcgagvrmr dvkcyqgtdi vrgcdplvkp
      901 vgrqacdlqa cpteppddsc qdqpgtncal aikvnlcghw yyskaccrsc rpphs
//
LOCUS       XP_061010187             919 aa            linear   MAM 02-DEC-2023
DEFINITION  sarcosine dehydrogenase, mitochondrial isoform X1 [Dama dama].
ACCESSION   XP_061010187
VERSION     XP_061010187.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154204.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..919
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..919
                     /product="sarcosine dehydrogenase, mitochondrial isoform
                     X1"
                     /calculated_mol_wt=100708
     Region          67..445
                     /region_name="DadA"
                     /note="Glycine/D-amino acid oxidase (deaminating) [Amino
                     acid transport and metabolism]; COG0665"
                     /db_xref="CDD:440429"
     Region          431..486
                     /region_name="FAO_M"
                     /note="FAD dependent oxidoreductase central domain;
                     pfam16350"
                     /db_xref="CDD:465100"
     Region          481..917
                     /region_name="GcvT"
                     /note="Glycine cleavage system protein T
                     (aminomethyltransferase) [Amino acid transport and
                     metabolism]; COG0404"
                     /db_xref="CDD:440173"
     CDS             1..919
                     /gene="SARDH"
                     /coded_by="XM_061154204.1:3806..6565"
                     /db_xref="GeneID:133064304"
ORIGIN      
        1 matlsralrg vaatrprrsp apgrglrpla sgagpnseks vpyqwtlkea qdtsaaargp
       61 srplpstasv vvigggslgc qtlyhlaklg vsgavllere rltsgttwht agllwqlrps
      121 dvevellaht rrvvsrdlee etglhtgwiq ngglftassr qrldeykrlm slgkvygies
      181 hvlspgetka lyplmnvedl ygtlyvphdg tmdpagtcts lvraatarga qviekcpvtg
      241 ihvrtddfgv rrvaavetef gcirtpcvvn cagvwagavg rmagvkvplv amhhayvvte
      301 riegiqnmpn vrdhdasvyl rlqgdalsvg gyetnpifwe evldkfafgl fdldwdvftq
      361 hiegainrvp vlektgikst vcgpesftpd hkplmgeape lrgfflgcgf nsagmmlggg
      421 cgqqlaswiv hgrpekdmhs ydirrfhhsl tdhgrwirer sheayaknys vvfphdepla
      481 grnmrtdplh eellargcvf qerhgwerpg wfnaqgtapv lpydyygayg hrahedyayg
      541 rllgqeytfs fplhhdaikk eclacrgaaa vfnmsyfgkf ylvgpdarka adwlfsadvs
      601 rppgstvytc mlnhrggteg dltvsrlapg sqasplapaf egdgyylavg gaaaqhswsh
      661 isaalqdrrf rcqlidssed lgllsvqgpa srailqevle adlsdeafpf sthklvraag
      721 hlvravrlsf vgelgwelht prpsclpvyq almtagakhg lvnagyraid slsiekgyrh
      781 whadlradds pleaglaftc klkssipflg realekqqae glrrrllgft vdekvpmfgl
      841 eaiwrngqvv ghvrradfgf tinktlaygy irdpsgglvs ldfvksgdya lermgvtyaa
      901 qahlkspfdp dnkrvkgiy
//
LOCUS       XP_061010188             919 aa            linear   MAM 02-DEC-2023
DEFINITION  sarcosine dehydrogenase, mitochondrial isoform X1 [Dama dama].
ACCESSION   XP_061010188
VERSION     XP_061010188.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154205.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..919
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..919
                     /product="sarcosine dehydrogenase, mitochondrial isoform
                     X1"
                     /calculated_mol_wt=100708
     Region          67..445
                     /region_name="DadA"
                     /note="Glycine/D-amino acid oxidase (deaminating) [Amino
                     acid transport and metabolism]; COG0665"
                     /db_xref="CDD:440429"
     Region          431..486
                     /region_name="FAO_M"
                     /note="FAD dependent oxidoreductase central domain;
                     pfam16350"
                     /db_xref="CDD:465100"
     Region          481..917
                     /region_name="GcvT"
                     /note="Glycine cleavage system protein T
                     (aminomethyltransferase) [Amino acid transport and
                     metabolism]; COG0404"
                     /db_xref="CDD:440173"
     CDS             1..919
                     /gene="SARDH"
                     /coded_by="XM_061154205.1:3803..6562"
                     /db_xref="GeneID:133064304"
ORIGIN      
        1 matlsralrg vaatrprrsp apgrglrpla sgagpnseks vpyqwtlkea qdtsaaargp
       61 srplpstasv vvigggslgc qtlyhlaklg vsgavllere rltsgttwht agllwqlrps
      121 dvevellaht rrvvsrdlee etglhtgwiq ngglftassr qrldeykrlm slgkvygies
      181 hvlspgetka lyplmnvedl ygtlyvphdg tmdpagtcts lvraatarga qviekcpvtg
      241 ihvrtddfgv rrvaavetef gcirtpcvvn cagvwagavg rmagvkvplv amhhayvvte
      301 riegiqnmpn vrdhdasvyl rlqgdalsvg gyetnpifwe evldkfafgl fdldwdvftq
      361 hiegainrvp vlektgikst vcgpesftpd hkplmgeape lrgfflgcgf nsagmmlggg
      421 cgqqlaswiv hgrpekdmhs ydirrfhhsl tdhgrwirer sheayaknys vvfphdepla
      481 grnmrtdplh eellargcvf qerhgwerpg wfnaqgtapv lpydyygayg hrahedyayg
      541 rllgqeytfs fplhhdaikk eclacrgaaa vfnmsyfgkf ylvgpdarka adwlfsadvs
      601 rppgstvytc mlnhrggteg dltvsrlapg sqasplapaf egdgyylavg gaaaqhswsh
      661 isaalqdrrf rcqlidssed lgllsvqgpa srailqevle adlsdeafpf sthklvraag
      721 hlvravrlsf vgelgwelht prpsclpvyq almtagakhg lvnagyraid slsiekgyrh
      781 whadlradds pleaglaftc klkssipflg realekqqae glrrrllgft vdekvpmfgl
      841 eaiwrngqvv ghvrradfgf tinktlaygy irdpsgglvs ldfvksgdya lermgvtyaa
      901 qahlkspfdp dnkrvkgiy
//
LOCUS       XP_061010189             829 aa            linear   MAM 02-DEC-2023
DEFINITION  sarcosine dehydrogenase, mitochondrial isoform X2 [Dama dama].
ACCESSION   XP_061010189
VERSION     XP_061010189.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154206.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..829
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..829
                     /product="sarcosine dehydrogenase, mitochondrial isoform
                     X2"
                     /calculated_mol_wt=90137
     Region          67..445
                     /region_name="DadA"
                     /note="Glycine/D-amino acid oxidase (deaminating) [Amino
                     acid transport and metabolism]; COG0665"
                     /db_xref="CDD:440429"
     Region          431..486
                     /region_name="FAO_M"
                     /note="FAD dependent oxidoreductase central domain;
                     pfam16350"
                     /db_xref="CDD:465100"
     Region          481..>721
                     /region_name="GcvT"
                     /note="Glycine cleavage system protein T
                     (aminomethyltransferase) [Amino acid transport and
                     metabolism]; COG0404"
                     /db_xref="CDD:440173"
     CDS             1..829
                     /gene="SARDH"
                     /coded_by="XM_061154206.1:3808..6297"
                     /db_xref="GeneID:133064304"
ORIGIN      
        1 matlsralrg vaatrprrsp apgrglrpla sgagpnseks vpyqwtlkea qdtsaaargp
       61 srplpstasv vvigggslgc qtlyhlaklg vsgavllere rltsgttwht agllwqlrps
      121 dvevellaht rrvvsrdlee etglhtgwiq ngglftassr qrldeykrlm slgkvygies
      181 hvlspgetka lyplmnvedl ygtlyvphdg tmdpagtcts lvraatarga qviekcpvtg
      241 ihvrtddfgv rrvaavetef gcirtpcvvn cagvwagavg rmagvkvplv amhhayvvte
      301 riegiqnmpn vrdhdasvyl rlqgdalsvg gyetnpifwe evldkfafgl fdldwdvftq
      361 hiegainrvp vlektgikst vcgpesftpd hkplmgeape lrgfflgcgf nsagmmlggg
      421 cgqqlaswiv hgrpekdmhs ydirrfhhsl tdhgrwirer sheayaknys vvfphdepla
      481 grnmrtdplh eellargcvf qerhgwerpg wfnaqgtapv lpydyygayg hrahedyayg
      541 rllgqeytfs fplhhdaikk eclacrgaaa vfnmsyfgkf ylvgpdarka adwlfsadvs
      601 rppgstvytc mlnhrggteg dltvsrlapg sqasplapaf egdgyylavg gaaaqhswsh
      661 isaalqdrrf rcqlidssed lgllsvqgpa srailqevle adlsdeafpf sthklvraag
      721 hlatgtgtpt sglmtapwrq awpspasssp pspswgarpw rssrprasag acwaspwtrk
      781 fpcsgwrpsg gtakwwatsg gptsdspsir pwptatsetp avgwspwtl
//
LOCUS       XP_061010190             754 aa            linear   MAM 02-DEC-2023
DEFINITION  sarcosine dehydrogenase, mitochondrial isoform X3 [Dama dama].
ACCESSION   XP_061010190
VERSION     XP_061010190.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154207.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..754
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..754
                     /product="sarcosine dehydrogenase, mitochondrial isoform
                     X3"
                     /calculated_mol_wt=83108
     Region          67..445
                     /region_name="DadA"
                     /note="Glycine/D-amino acid oxidase (deaminating) [Amino
                     acid transport and metabolism]; COG0665"
                     /db_xref="CDD:440429"
     Region          431..486
                     /region_name="FAO_M"
                     /note="FAD dependent oxidoreductase central domain;
                     pfam16350"
                     /db_xref="CDD:465100"
     Region          <558..752
                     /region_name="GcvT"
                     /note="Glycine cleavage system protein T
                     (aminomethyltransferase) [Amino acid transport and
                     metabolism]; COG0404"
                     /db_xref="CDD:440173"
     CDS             1..754
                     /gene="SARDH"
                     /coded_by="XM_061154207.1:3807..6071"
                     /db_xref="GeneID:133064304"
ORIGIN      
        1 matlsralrg vaatrprrsp apgrglrpla sgagpnseks vpyqwtlkea qdtsaaargp
       61 srplpstasv vvigggslgc qtlyhlaklg vsgavllere rltsgttwht agllwqlrps
      121 dvevellaht rrvvsrdlee etglhtgwiq ngglftassr qrldeykrlm slgkvygies
      181 hvlspgetka lyplmnvedl ygtlyvphdg tmdpagtcts lvraatarga qviekcpvtg
      241 ihvrtddfgv rrvaavetef gcirtpcvvn cagvwagavg rmagvkvplv amhhayvvte
      301 riegiqnmpn vrdhdasvyl rlqgdalsvg gyetnpifwe evldkfafgl fdldwdvftq
      361 hiegainrvp vlektgikst vcgpesftpd hkplmgeape lrgfflgcgf nsagmmlggg
      421 cgqqlaswiv hgrpekdmhs ydirrfhhsl tdhgrwirer sheayaknys vvfphdepla
      481 grnmrtdplh eellargcvf qerhgwerpg wfnaqgtapv lpydyygayg hrahedyayg
      541 rllgqeytfs fplhhdavra vrlsfvgelg welhtprpsc lpvyqalmta gakhglvnag
      601 yraidslsie kgyrhwhadl raddspleag laftcklkss ipflgreale kqqaeglrrr
      661 llgftvdekv pmfgleaiwr ngqvvghvrr adfgftinkt laygyirdps gglvsldfvk
      721 sgdyalermg vtyaaqahlk spfdpdnkrv kgiy
//
LOCUS       XP_061010192             752 aa            linear   MAM 02-DEC-2023
DEFINITION  sarcosine dehydrogenase, mitochondrial isoform X4 [Dama dama].
ACCESSION   XP_061010192
VERSION     XP_061010192.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154209.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..752
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..752
                     /product="sarcosine dehydrogenase, mitochondrial isoform
                     X4"
                     /calculated_mol_wt=82154
     Region          67..445
                     /region_name="DadA"
                     /note="Glycine/D-amino acid oxidase (deaminating) [Amino
                     acid transport and metabolism]; COG0665"
                     /db_xref="CDD:440429"
     Region          431..486
                     /region_name="FAO_M"
                     /note="FAD dependent oxidoreductase central domain;
                     pfam16350"
                     /db_xref="CDD:465100"
     Region          481..>721
                     /region_name="GcvT"
                     /note="Glycine cleavage system protein T
                     (aminomethyltransferase) [Amino acid transport and
                     metabolism]; COG0404"
                     /db_xref="CDD:440173"
     CDS             1..752
                     /gene="SARDH"
                     /coded_by="XM_061154209.1:3810..6068"
                     /db_xref="GeneID:133064304"
ORIGIN      
        1 matlsralrg vaatrprrsp apgrglrpla sgagpnseks vpyqwtlkea qdtsaaargp
       61 srplpstasv vvigggslgc qtlyhlaklg vsgavllere rltsgttwht agllwqlrps
      121 dvevellaht rrvvsrdlee etglhtgwiq ngglftassr qrldeykrlm slgkvygies
      181 hvlspgetka lyplmnvedl ygtlyvphdg tmdpagtcts lvraatarga qviekcpvtg
      241 ihvrtddfgv rrvaavetef gcirtpcvvn cagvwagavg rmagvkvplv amhhayvvte
      301 riegiqnmpn vrdhdasvyl rlqgdalsvg gyetnpifwe evldkfafgl fdldwdvftq
      361 hiegainrvp vlektgikst vcgpesftpd hkplmgeape lrgfflgcgf nsagmmlggg
      421 cgqqlaswiv hgrpekdmhs ydirrfhhsl tdhgrwirer sheayaknys vvfphdepla
      481 grnmrtdplh eellargcvf qerhgwerpg wfnaqgtapv lpydyygayg hrahedyayg
      541 rllgqeytfs fplhhdaikk eclacrgaaa vfnmsyfgkf ylvgpdarka adwlfsadvs
      601 rppgstvytc mlnhrggteg dltvsrlapg sqasplapaf egdgyylavg gaaaqhswsh
      661 isaalqdrrf rcqlidssed lgllsvqgpa srailqevle adlsdeafpf sthklvraag
      721 hlesshvrag ghleerpsgg prpegrlrih hq
//
LOCUS       XP_061010193             869 aa            linear   MAM 02-DEC-2023
DEFINITION  guanine nucleotide exchange factor VAV2 isoform X1 [Dama dama].
ACCESSION   XP_061010193
VERSION     XP_061010193.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154210.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..869
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..869
                     /product="guanine nucleotide exchange factor VAV2 isoform
                     X1"
                     /calculated_mol_wt=99761
     Region          2..120
                     /region_name="CH_VAV2"
                     /note="calponin homology (CH) domain found in VAV2 protein
                     and similar proteins; cd21263"
                     /db_xref="CDD:409112"
     Site            order(3,7,70,72..73,76..77,79,90..98,104,106..107,
                     109..110,113..114,117)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409112"
     Region          197..370
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; smart00325"
                     /db_xref="CDD:214619"
     Site            order(200,204,293,321..322,325..326,328..329,332..333,
                     336..337,340,365,369)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          384..506
                     /region_name="PH_Vav"
                     /note="Vav pleckstrin homology (PH) domain; cd01223"
                     /db_xref="CDD:269930"
     Region          509..566
                     /region_name="C1_VAV2"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in VAV2 protein; cd20868"
                     /db_xref="CDD:410418"
     Region          580..639
                     /region_name="SH3_VAV2_1"
                     /note="First Src homology 3 domain of VAV2 protein;
                     cd11980"
                     /db_xref="CDD:212913"
     Site            order(585,587,590,598,617..618,633,635..636)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212913"
     Region          657..759
                     /region_name="SH2_Vav2"
                     /note="Src homology 2 (SH2) domain found in the Vav2
                     proteins; cd10406"
                     /db_xref="CDD:198269"
     Site            order(670,688,709,711)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198269"
     Site            order(710,737)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198269"
     Region          810..867
                     /region_name="SH3_VAV2_2"
                     /note="C-terminal (or second) Src homology 3 domain of
                     VAV2 protein; cd11977"
                     /db_xref="CDD:212910"
     Site            order(816,818,821,825,845..846,859,861..862)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212910"
     CDS             1..869
                     /gene="VAV2"
                     /coded_by="XM_061154210.1:61..2670"
                     /db_xref="GeneID:133064305"
ORIGIN      
        1 meqwrqcgrw lidcrvlppn hrvvwpsavv fdlaqalrdg vllcqllhnl spgsidlkdv
       61 nfrpqmsqfl clknirtflk vchdkfglrn selfdpfdlf dvrdfgkvis avsrlslhnl
      121 aqnkgirpfp seetaended vyrsleelad ehgvgediyd cvpceddgdd iyediikvev
      181 qqpmkmgmte ddkrncclle iqeteakyyr tledieknyv tplrlvlspa dmaaifinle
      241 dlikvhhsfl raidvsmmag gsslakvfld fkerlliyge ycshmehaqn tlnqllasre
      301 dfrqkveect lkvqdgkfkl qdllvvpmqr vlkyhlllke llshstdrpe rqqlkealea
      361 mqdlamyine vkrdketlkk isefqssien lqvkleefgr pkidgelkvr sivnhtkqdr
      421 ylflfdkvvi vckrrgysye lkeiiellfh kmtddpmnnk dvkkwsygfy lihlqgkqgf
      481 qffcktedmk rkwmeqfema msnikpdkan anhhsfqmyt fdkttnckac rmflrgtfyq
      541 gylctkcgvg ahkeclevtp pckisspadp dasgagpgpk mvavqnyhgn pappgkpvlt
      601 fqtgdviell rgdpesqwwe grlvqtrksg yfpsssvkpc pvdgrppisr plsremdyta
      661 ypwfagnmer qqtdnllksh asgtylirer paeaerfais ikfndevkhi kvvekdswvh
      721 iteakkfesl lelveyyqch slkesfkqld ttlkypykar ectasrassr spascasynf
      781 sflspqglgl asqgssapfw savftprvig tavarynfaa rdlrelslre gdvvkiysri
      841 ggdqgwwkge tngrigwfps tyveeegvq
//
LOCUS       XP_061010194             868 aa            linear   MAM 02-DEC-2023
DEFINITION  guanine nucleotide exchange factor VAV2 isoform X2 [Dama dama].
ACCESSION   XP_061010194
VERSION     XP_061010194.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154211.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..868
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..868
                     /product="guanine nucleotide exchange factor VAV2 isoform
                     X2"
                     /calculated_mol_wt=99690
     Region          2..120
                     /region_name="CH_VAV2"
                     /note="calponin homology (CH) domain found in VAV2 protein
                     and similar proteins; cd21263"
                     /db_xref="CDD:409112"
     Site            order(3,7,70,72..73,76..77,79,90..98,104,106..107,
                     109..110,113..114,117)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409112"
     Region          194..369
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous
                     (DH) domain. It appears that PH domains invariably occur
                     C-terminal to RhoGEF/DH domains; cd00160"
                     /db_xref="CDD:238091"
     Site            order(200,204,293,321..322,325..326,328..329,332..333,
                     336..337,340,365,369)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          384..506
                     /region_name="PH_Vav"
                     /note="Vav pleckstrin homology (PH) domain; cd01223"
                     /db_xref="CDD:269930"
     Region          509..566
                     /region_name="C1_VAV2"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in VAV2 protein; cd20868"
                     /db_xref="CDD:410418"
     Region          580..639
                     /region_name="SH3_VAV2_1"
                     /note="First Src homology 3 domain of VAV2 protein;
                     cd11980"
                     /db_xref="CDD:212913"
     Site            order(585,587,590,598,617..618,633,635..636)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212913"
     Region          657..759
                     /region_name="SH2_Vav2"
                     /note="Src homology 2 (SH2) domain found in the Vav2
                     proteins; cd10406"
                     /db_xref="CDD:198269"
     Site            order(670,688,709,711)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198269"
     Site            order(710,737)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198269"
     Region          809..866
                     /region_name="SH3_VAV2_2"
                     /note="C-terminal (or second) Src homology 3 domain of
                     VAV2 protein; cd11977"
                     /db_xref="CDD:212910"
     Site            order(815,817,820,824,844..845,858,860..861)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212910"
     CDS             1..868
                     /gene="VAV2"
                     /coded_by="XM_061154211.1:61..2667"
                     /db_xref="GeneID:133064305"
ORIGIN      
        1 meqwrqcgrw lidcrvlppn hrvvwpsavv fdlaqalrdg vllcqllhnl spgsidlkdv
       61 nfrpqmsqfl clknirtflk vchdkfglrn selfdpfdlf dvrdfgkvis avsrlslhnl
      121 aqnkgirpfp seetaended vyrsleelad ehgvgediyd cvpceddgdd iyediikvev
      181 qqpmkmgmte ddkrncclle iqeteakyyr tledieknyv tplrlvlspa dmaaifinle
      241 dlikvhhsfl raidvsmmag gsslakvfld fkerlliyge ycshmehaqn tlnqllasre
      301 dfrqkveect lkvqdgkfkl qdllvvpmqr vlkyhlllke llshstdrpe rqqlkealea
      361 mqdlamyine vkrdketlkk isefqssien lqvkleefgr pkidgelkvr sivnhtkqdr
      421 ylflfdkvvi vckrrgysye lkeiiellfh kmtddpmnnk dvkkwsygfy lihlqgkqgf
      481 qffcktedmk rkwmeqfema msnikpdkan anhhsfqmyt fdkttnckac rmflrgtfyq
      541 gylctkcgvg ahkeclevtp pckisspadp dasgagpgpk mvavqnyhgn pappgkpvlt
      601 fqtgdviell rgdpesqwwe grlvqtrksg yfpsssvkpc pvdgrppisr plsremdyta
      661 ypwfagnmer qqtdnllksh asgtylirer paeaerfais ikfndevkhi kvvekdswvh
      721 iteakkfesl lelveyyqch slkesfkqld ttlkypykar ectasrassr spascasynf
      781 sflspqglgl asqgssapfw svftprvigt avarynfaar dlrelslreg dvvkiysrig
      841 gdqgwwkget ngrigwfpst yveeegvq
//
LOCUS       XP_061010195             868 aa            linear   MAM 02-DEC-2023
DEFINITION  guanine nucleotide exchange factor VAV2 isoform X3 [Dama dama].
ACCESSION   XP_061010195
VERSION     XP_061010195.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154212.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..868
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..868
                     /product="guanine nucleotide exchange factor VAV2 isoform
                     X3"
                     /calculated_mol_wt=99631
     Region          2..120
                     /region_name="CH_VAV2"
                     /note="calponin homology (CH) domain found in VAV2 protein
                     and similar proteins; cd21263"
                     /db_xref="CDD:409112"
     Site            order(3,7,70,72..73,76..77,79,90..98,104,106..107,
                     109..110,113..114,117)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409112"
     Region          197..370
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; smart00325"
                     /db_xref="CDD:214619"
     Site            order(200,204,293,321..322,325..326,328..329,332..333,
                     336..337,340,365,369)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          384..506
                     /region_name="PH_Vav"
                     /note="Vav pleckstrin homology (PH) domain; cd01223"
                     /db_xref="CDD:269930"
     Region          509..566
                     /region_name="C1_VAV2"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in VAV2 protein; cd20868"
                     /db_xref="CDD:410418"
     Region          580..639
                     /region_name="SH3_VAV2_1"
                     /note="First Src homology 3 domain of VAV2 protein;
                     cd11980"
                     /db_xref="CDD:212913"
     Site            order(585,587,590,598,617..618,633,635..636)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212913"
     Region          657..758
                     /region_name="SH2_Vav2"
                     /note="Src homology 2 (SH2) domain found in the Vav2
                     proteins; cd10406"
                     /db_xref="CDD:198269"
     Site            order(670,688,709,711)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198269"
     Site            order(710,736)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198269"
     Region          809..866
                     /region_name="SH3_VAV2_2"
                     /note="C-terminal (or second) Src homology 3 domain of
                     VAV2 protein; cd11977"
                     /db_xref="CDD:212910"
     Site            order(815,817,820,824,844..845,858,860..861)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212910"
     CDS             1..868
                     /gene="VAV2"
                     /coded_by="XM_061154212.1:61..2667"
                     /db_xref="GeneID:133064305"
ORIGIN      
        1 meqwrqcgrw lidcrvlppn hrvvwpsavv fdlaqalrdg vllcqllhnl spgsidlkdv
       61 nfrpqmsqfl clknirtflk vchdkfglrn selfdpfdlf dvrdfgkvis avsrlslhnl
      121 aqnkgirpfp seetaended vyrsleelad ehgvgediyd cvpceddgdd iyediikvev
      181 qqpmkmgmte ddkrncclle iqeteakyyr tledieknyv tplrlvlspa dmaaifinle
      241 dlikvhhsfl raidvsmmag gsslakvfld fkerlliyge ycshmehaqn tlnqllasre
      301 dfrqkveect lkvqdgkfkl qdllvvpmqr vlkyhlllke llshstdrpe rqqlkealea
      361 mqdlamyine vkrdketlkk isefqssien lqvkleefgr pkidgelkvr sivnhtkqdr
      421 ylflfdkvvi vckrrgysye lkeiiellfh kmtddpmnnk dvkkwsygfy lihlqgkqgf
      481 qffcktedmk rkwmeqfema msnikpdkan anhhsfqmyt fdkttnckac rmflrgtfyq
      541 gylctkcgvg ahkeclevtp pckisspadp dasgagpgpk mvavqnyhgn pappgkpvlt
      601 fqtgdviell rgdpesqwwe grlvqtrksg yfpsssvkpc pvdgrppisr plsremdyta
      661 ypwfagnmer qqtdnllksh asgtylirer paeaerfais ikfndevkhi kvvekdswvh
      721 iteakkfesl llveyyqchs lkesfkqldt tlkypykare ctasrassrs pascasynfs
      781 flspqglgla sqgssapfws avftprvigt avarynfaar dlrelslreg dvvkiysrig
      841 gdqgwwkget ngrigwfpst yveeegvq
//
LOCUS       XP_061010196             840 aa            linear   MAM 02-DEC-2023
DEFINITION  guanine nucleotide exchange factor VAV2 isoform X4 [Dama dama].
ACCESSION   XP_061010196
VERSION     XP_061010196.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154213.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..840
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..840
                     /product="guanine nucleotide exchange factor VAV2 isoform
                     X4"
                     /calculated_mol_wt=96810
     Region          2..120
                     /region_name="CH_VAV2"
                     /note="calponin homology (CH) domain found in VAV2 protein
                     and similar proteins; cd21263"
                     /db_xref="CDD:409112"
     Site            order(3,7,70,72..73,76..77,79,90..98,104,106..107,
                     109..110,113..114,117)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409112"
     Region          197..370
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; smart00325"
                     /db_xref="CDD:214619"
     Site            order(200,204,293,321..322,325..326,328..329,332..333,
                     336..337,340,365,369)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          384..506
                     /region_name="PH_Vav"
                     /note="Vav pleckstrin homology (PH) domain; cd01223"
                     /db_xref="CDD:269930"
     Region          509..566
                     /region_name="C1_VAV2"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in VAV2 protein; cd20868"
                     /db_xref="CDD:410418"
     Region          580..639
                     /region_name="SH3_VAV2_1"
                     /note="First Src homology 3 domain of VAV2 protein;
                     cd11980"
                     /db_xref="CDD:212913"
     Site            order(585,587,590,598,617..618,633,635..636)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212913"
     Region          657..759
                     /region_name="SH2_Vav2"
                     /note="Src homology 2 (SH2) domain found in the Vav2
                     proteins; cd10406"
                     /db_xref="CDD:198269"
     Site            order(670,688,709,711)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198269"
     Site            order(710,737)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198269"
     Region          781..838
                     /region_name="SH3_VAV2_2"
                     /note="C-terminal (or second) Src homology 3 domain of
                     VAV2 protein; cd11977"
                     /db_xref="CDD:212910"
     Site            order(787,789,792,796,816..817,830,832..833)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212910"
     CDS             1..840
                     /gene="VAV2"
                     /coded_by="XM_061154213.1:61..2583"
                     /db_xref="GeneID:133064305"
ORIGIN      
        1 meqwrqcgrw lidcrvlppn hrvvwpsavv fdlaqalrdg vllcqllhnl spgsidlkdv
       61 nfrpqmsqfl clknirtflk vchdkfglrn selfdpfdlf dvrdfgkvis avsrlslhnl
      121 aqnkgirpfp seetaended vyrsleelad ehgvgediyd cvpceddgdd iyediikvev
      181 qqpmkmgmte ddkrncclle iqeteakyyr tledieknyv tplrlvlspa dmaaifinle
      241 dlikvhhsfl raidvsmmag gsslakvfld fkerlliyge ycshmehaqn tlnqllasre
      301 dfrqkveect lkvqdgkfkl qdllvvpmqr vlkyhlllke llshstdrpe rqqlkealea
      361 mqdlamyine vkrdketlkk isefqssien lqvkleefgr pkidgelkvr sivnhtkqdr
      421 ylflfdkvvi vckrrgysye lkeiiellfh kmtddpmnnk dvkkwsygfy lihlqgkqgf
      481 qffcktedmk rkwmeqfema msnikpdkan anhhsfqmyt fdkttnckac rmflrgtfyq
      541 gylctkcgvg ahkeclevtp pckisspadp dasgagpgpk mvavqnyhgn pappgkpvlt
      601 fqtgdviell rgdpesqwwe grlvqtrksg yfpsssvkpc pvdgrppisr plsremdyta
      661 ypwfagnmer qqtdnllksh asgtylirer paeaerfais ikfndevkhi kvvekdswvh
      721 iteakkfesl lelveyyqch slkesfkqld ttlkypykar ectasrassr spavftprvi
      781 gtavarynfa ardlrelslr egdvvkiysr iggdqgwwkg etngrigwfp styveeegvq
//
LOCUS       XP_061010197             839 aa            linear   MAM 02-DEC-2023
DEFINITION  guanine nucleotide exchange factor VAV2 isoform X5 [Dama dama].
ACCESSION   XP_061010197
VERSION     XP_061010197.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154214.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..839
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..839
                     /product="guanine nucleotide exchange factor VAV2 isoform
                     X5"
                     /calculated_mol_wt=96739
     Region          2..120
                     /region_name="CH_VAV2"
                     /note="calponin homology (CH) domain found in VAV2 protein
                     and similar proteins; cd21263"
                     /db_xref="CDD:409112"
     Site            order(3,7,70,72..73,76..77,79,90..98,104,106..107,
                     109..110,113..114,117)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409112"
     Region          197..370
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; smart00325"
                     /db_xref="CDD:214619"
     Site            order(200,204,293,321..322,325..326,328..329,332..333,
                     336..337,340,365,369)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          384..506
                     /region_name="PH_Vav"
                     /note="Vav pleckstrin homology (PH) domain; cd01223"
                     /db_xref="CDD:269930"
     Region          509..566
                     /region_name="C1_VAV2"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in VAV2 protein; cd20868"
                     /db_xref="CDD:410418"
     Region          580..639
                     /region_name="SH3_VAV2_1"
                     /note="First Src homology 3 domain of VAV2 protein;
                     cd11980"
                     /db_xref="CDD:212913"
     Site            order(585,587,590,598,617..618,633,635..636)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212913"
     Region          657..759
                     /region_name="SH2_Vav2"
                     /note="Src homology 2 (SH2) domain found in the Vav2
                     proteins; cd10406"
                     /db_xref="CDD:198269"
     Site            order(670,688,709,711)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198269"
     Site            order(710,737)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198269"
     Region          780..837
                     /region_name="SH3_VAV2_2"
                     /note="C-terminal (or second) Src homology 3 domain of
                     VAV2 protein; cd11977"
                     /db_xref="CDD:212910"
     Site            order(786,788,791,795,815..816,829,831..832)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212910"
     CDS             1..839
                     /gene="VAV2"
                     /coded_by="XM_061154214.1:61..2580"
                     /db_xref="GeneID:133064305"
ORIGIN      
        1 meqwrqcgrw lidcrvlppn hrvvwpsavv fdlaqalrdg vllcqllhnl spgsidlkdv
       61 nfrpqmsqfl clknirtflk vchdkfglrn selfdpfdlf dvrdfgkvis avsrlslhnl
      121 aqnkgirpfp seetaended vyrsleelad ehgvgediyd cvpceddgdd iyediikvev
      181 qqpmkmgmte ddkrncclle iqeteakyyr tledieknyv tplrlvlspa dmaaifinle
      241 dlikvhhsfl raidvsmmag gsslakvfld fkerlliyge ycshmehaqn tlnqllasre
      301 dfrqkveect lkvqdgkfkl qdllvvpmqr vlkyhlllke llshstdrpe rqqlkealea
      361 mqdlamyine vkrdketlkk isefqssien lqvkleefgr pkidgelkvr sivnhtkqdr
      421 ylflfdkvvi vckrrgysye lkeiiellfh kmtddpmnnk dvkkwsygfy lihlqgkqgf
      481 qffcktedmk rkwmeqfema msnikpdkan anhhsfqmyt fdkttnckac rmflrgtfyq
      541 gylctkcgvg ahkeclevtp pckisspadp dasgagpgpk mvavqnyhgn pappgkpvlt
      601 fqtgdviell rgdpesqwwe grlvqtrksg yfpsssvkpc pvdgrppisr plsremdyta
      661 ypwfagnmer qqtdnllksh asgtylirer paeaerfais ikfndevkhi kvvekdswvh
      721 iteakkfesl lelveyyqch slkesfkqld ttlkypykar ectasrassr spvftprvig
      781 tavarynfaa rdlrelslre gdvvkiysri ggdqgwwkge tngrigwfps tyveeegvq
//
LOCUS       XP_061010198             839 aa            linear   MAM 02-DEC-2023
DEFINITION  guanine nucleotide exchange factor VAV2 isoform X6 [Dama dama].
ACCESSION   XP_061010198
VERSION     XP_061010198.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154215.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..839
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..839
                     /product="guanine nucleotide exchange factor VAV2 isoform
                     X6"
                     /calculated_mol_wt=96681
     Region          2..120
                     /region_name="CH_VAV2"
                     /note="calponin homology (CH) domain found in VAV2 protein
                     and similar proteins; cd21263"
                     /db_xref="CDD:409112"
     Site            order(3,7,70,72..73,76..77,79,90..98,104,106..107,
                     109..110,113..114,117)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409112"
     Region          197..370
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; smart00325"
                     /db_xref="CDD:214619"
     Site            order(200,204,293,321..322,325..326,328..329,332..333,
                     336..337,340,365,369)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          384..506
                     /region_name="PH_Vav"
                     /note="Vav pleckstrin homology (PH) domain; cd01223"
                     /db_xref="CDD:269930"
     Region          509..566
                     /region_name="C1_VAV2"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in VAV2 protein; cd20868"
                     /db_xref="CDD:410418"
     Region          580..639
                     /region_name="SH3_VAV2_1"
                     /note="First Src homology 3 domain of VAV2 protein;
                     cd11980"
                     /db_xref="CDD:212913"
     Site            order(585,587,590,598,617..618,633,635..636)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212913"
     Region          657..758
                     /region_name="SH2_Vav2"
                     /note="Src homology 2 (SH2) domain found in the Vav2
                     proteins; cd10406"
                     /db_xref="CDD:198269"
     Site            order(670,688,709,711)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198269"
     Site            order(710,736)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198269"
     Region          780..837
                     /region_name="SH3_VAV2_2"
                     /note="C-terminal (or second) Src homology 3 domain of
                     VAV2 protein; cd11977"
                     /db_xref="CDD:212910"
     Site            order(786,788,791,795,815..816,829,831..832)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212910"
     CDS             1..839
                     /gene="VAV2"
                     /coded_by="XM_061154215.1:61..2580"
                     /db_xref="GeneID:133064305"
ORIGIN      
        1 meqwrqcgrw lidcrvlppn hrvvwpsavv fdlaqalrdg vllcqllhnl spgsidlkdv
       61 nfrpqmsqfl clknirtflk vchdkfglrn selfdpfdlf dvrdfgkvis avsrlslhnl
      121 aqnkgirpfp seetaended vyrsleelad ehgvgediyd cvpceddgdd iyediikvev
      181 qqpmkmgmte ddkrncclle iqeteakyyr tledieknyv tplrlvlspa dmaaifinle
      241 dlikvhhsfl raidvsmmag gsslakvfld fkerlliyge ycshmehaqn tlnqllasre
      301 dfrqkveect lkvqdgkfkl qdllvvpmqr vlkyhlllke llshstdrpe rqqlkealea
      361 mqdlamyine vkrdketlkk isefqssien lqvkleefgr pkidgelkvr sivnhtkqdr
      421 ylflfdkvvi vckrrgysye lkeiiellfh kmtddpmnnk dvkkwsygfy lihlqgkqgf
      481 qffcktedmk rkwmeqfema msnikpdkan anhhsfqmyt fdkttnckac rmflrgtfyq
      541 gylctkcgvg ahkeclevtp pckisspadp dasgagpgpk mvavqnyhgn pappgkpvlt
      601 fqtgdviell rgdpesqwwe grlvqtrksg yfpsssvkpc pvdgrppisr plsremdyta
      661 ypwfagnmer qqtdnllksh asgtylirer paeaerfais ikfndevkhi kvvekdswvh
      721 iteakkfesl llveyyqchs lkesfkqldt tlkypykare ctasrassrs pavftprvig
      781 tavarynfaa rdlrelslre gdvvkiysri ggdqgwwkge tngrigwfps tyveeegvq
//
LOCUS       XP_061010199             838 aa            linear   MAM 02-DEC-2023
DEFINITION  guanine nucleotide exchange factor VAV2 isoform X7 [Dama dama].
ACCESSION   XP_061010199
VERSION     XP_061010199.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154216.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..838
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..838
                     /product="guanine nucleotide exchange factor VAV2 isoform
                     X7"
                     /calculated_mol_wt=96610
     Region          2..120
                     /region_name="CH_VAV2"
                     /note="calponin homology (CH) domain found in VAV2 protein
                     and similar proteins; cd21263"
                     /db_xref="CDD:409112"
     Site            order(3,7,70,72..73,76..77,79,90..98,104,106..107,
                     109..110,113..114,117)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409112"
     Region          197..370
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; smart00325"
                     /db_xref="CDD:214619"
     Site            order(200,204,293,321..322,325..326,328..329,332..333,
                     336..337,340,365,369)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          384..506
                     /region_name="PH_Vav"
                     /note="Vav pleckstrin homology (PH) domain; cd01223"
                     /db_xref="CDD:269930"
     Region          509..566
                     /region_name="C1_VAV2"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in VAV2 protein; cd20868"
                     /db_xref="CDD:410418"
     Region          580..639
                     /region_name="SH3_VAV2_1"
                     /note="First Src homology 3 domain of VAV2 protein;
                     cd11980"
                     /db_xref="CDD:212913"
     Site            order(585,587,590,598,617..618,633,635..636)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212913"
     Region          657..758
                     /region_name="SH2_Vav2"
                     /note="Src homology 2 (SH2) domain found in the Vav2
                     proteins; cd10406"
                     /db_xref="CDD:198269"
     Site            order(670,688,709,711)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198269"
     Site            order(710,736)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198269"
     Region          779..836
                     /region_name="SH3_VAV2_2"
                     /note="C-terminal (or second) Src homology 3 domain of
                     VAV2 protein; cd11977"
                     /db_xref="CDD:212910"
     Site            order(785,787,790,794,814..815,828,830..831)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212910"
     CDS             1..838
                     /gene="VAV2"
                     /coded_by="XM_061154216.1:61..2577"
                     /db_xref="GeneID:133064305"
ORIGIN      
        1 meqwrqcgrw lidcrvlppn hrvvwpsavv fdlaqalrdg vllcqllhnl spgsidlkdv
       61 nfrpqmsqfl clknirtflk vchdkfglrn selfdpfdlf dvrdfgkvis avsrlslhnl
      121 aqnkgirpfp seetaended vyrsleelad ehgvgediyd cvpceddgdd iyediikvev
      181 qqpmkmgmte ddkrncclle iqeteakyyr tledieknyv tplrlvlspa dmaaifinle
      241 dlikvhhsfl raidvsmmag gsslakvfld fkerlliyge ycshmehaqn tlnqllasre
      301 dfrqkveect lkvqdgkfkl qdllvvpmqr vlkyhlllke llshstdrpe rqqlkealea
      361 mqdlamyine vkrdketlkk isefqssien lqvkleefgr pkidgelkvr sivnhtkqdr
      421 ylflfdkvvi vckrrgysye lkeiiellfh kmtddpmnnk dvkkwsygfy lihlqgkqgf
      481 qffcktedmk rkwmeqfema msnikpdkan anhhsfqmyt fdkttnckac rmflrgtfyq
      541 gylctkcgvg ahkeclevtp pckisspadp dasgagpgpk mvavqnyhgn pappgkpvlt
      601 fqtgdviell rgdpesqwwe grlvqtrksg yfpsssvkpc pvdgrppisr plsremdyta
      661 ypwfagnmer qqtdnllksh asgtylirer paeaerfais ikfndevkhi kvvekdswvh
      721 iteakkfesl llveyyqchs lkesfkqldt tlkypykare ctasrassrs pvftprvigt
      781 avarynfaar dlrelslreg dvvkiysrig gdqgwwkget ngrigwfpst yveeegvq
//
LOCUS       XP_061010200             724 aa            linear   MAM 02-DEC-2023
DEFINITION  bromodomain-containing protein 3 [Dama dama].
ACCESSION   XP_061010200
VERSION     XP_061010200.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154217.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..724
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..724
                     /product="bromodomain-containing protein 3"
                     /calculated_mol_wt=79139
     Region          34..140
                     /region_name="Bromo_Brdt_I_like"
                     /note="Bromodomain, Brdt_like subfamily, repeat I. Human
                     Brdt is a testis-specific member of the BET subfamily of
                     bromodomain proteins; the first bromodomain in Brdt has
                     been shown to be essential for male germ cell
                     differentiation. Bromodomains are 110 amino...; cd05497"
                     /db_xref="CDD:99929"
     Site            order(63,70,73,112,116,122)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99929"
     Region          311..412
                     /region_name="Bromo_Brdt_II_like"
                     /note="Bromodomain, Brdt_like subfamily, repeat II. Human
                     Brdt is a testis-specific member of the BET subfamily of
                     bromodomain proteins; the first bromodomain in Brdt has
                     been shown to be essential for male germ cell
                     differentiation. Bromodomains are 110 amino...; cd05498"
                     /db_xref="CDD:99930"
     Site            order(338,345,348,387,391,397)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99930"
     Region          569..633
                     /region_name="BET"
                     /note="Bromodomain extra-terminal - transcription
                     regulation; pfam17035"
                     /db_xref="CDD:435704"
     CDS             1..724
                     /gene="BRD3"
                     /coded_by="XM_061154217.1:238..2412"
                     /db_xref="GeneID:133064306"
ORIGIN      
        1 mstatpvapt gipaapgpvn ppppevsnpa kpgrktnqlq ymqnvvvktl wkhqfawpfy
       61 qpvdaiklnl pdyhkiiknp mdmgtikkrl ennyywsase cmqdfntmft ncyiynkptd
      121 divlmaqale kiflqkvaqm pqeevellpp apkgkgrkpa sgtqsagsqq vaavssvcpa
      181 tpfqsvpptv sqtpviaatp vptitanvts vpvppaaapp ppatpiipvv pptppvvkkk
      241 gvkrkadttt pttsaitasr sesppplsdp kqakvvarre sggrpikppk kdledgevpq
      301 hagkkgrlse hlrhcdsilk emlskkhaay awpfykpvda ealelhdyhd iikhpmdlst
      361 vkkkmdsrey pdaqgfaadi rlmfsncyky nppdhevvam arklqdvfem rfakmpdepa
      421 eapalpapaa pvvskgvess rssdesssds gssdseeera trlaelqeql kavheqlaal
      481 sqapvnkpkr kkekkekkkk dkdkdkerhk akaedekrak aappakqapq kkapakkans
      541 ttvagrqpkk ggkqasasyd seeeeeglpm sydekrqlsl dinrlpgekl grvvhiiqsr
      601 epslrdsnpd eieidfetlk pttlrelery vksclqkkqr kpfstsgkkq aakskeelaq
      661 ekkkelerrl qdvsgqlsns kkpakreksg saasggpsrl ssssssesgs sstsgsssds
      721 sdse
//
LOCUS       XP_061010202             610 aa            linear   MAM 02-DEC-2023
DEFINITION  dopamine beta-hydroxylase [Dama dama].
ACCESSION   XP_061010202
VERSION     XP_061010202.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154219.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..610
                     /product="dopamine beta-hydroxylase"
                     /calculated_mol_wt=68031
     Region          52..163
                     /region_name="DOMON"
                     /note="DOMON domain; pfam03351"
                     /db_xref="CDD:460893"
     Region          207..334
                     /region_name="Cu2_monooxygen"
                     /note="Copper type II ascorbate-dependent monooxygenase,
                     N-terminal domain; pfam01082"
                     /db_xref="CDD:460053"
     Region          353..509
                     /region_name="Cu2_monoox_C"
                     /note="Copper type II ascorbate-dependent monooxygenase,
                     C-terminal domain; pfam03712"
                     /db_xref="CDD:461021"
     CDS             1..610
                     /gene="DBH"
                     /coded_by="XM_061154219.1:1..1833"
                     /db_xref="GeneID:133064307"
ORIGIN      
        1 mqvpspsvre aasmygtava vflvilvaal qgsapaespf pfhipldpeg tlelswnvsy
       61 vqetvyfqll vrelkagilf gmsdrgelen adlvvlwtdg dgayfgdaws dqkgqvhlds
      121 qqdyqllraq rtpeglyllf krpfgtcdpn dyliedgtvh lvyglleepl rsleaintsg
      181 lhtglqrvql lkpnisqpal padtrtmeir apdvlipgqe ttywcyisel pagfprhhiv
      241 myepivtegn ealvhhmevf qcaaefesvp hfsgpcdskm kperlnycrh vlaawalgak
      301 afyypeeagl afggpgssrf lrlevhyhnp lmikgrrdss girlyytatl rrfdagimel
      361 glvytpvmai ppqetafvlt gyctdkctql alpasgihif asqlhthltg rkvvtvlard
      421 grerevvnrd nhysphfqei rmlkkvvsvh pgdvlitsct yntedrrlat vggfgileem
      481 cvnyvhyypq trlelcksav dpgflqkyfh lvnrfnseev ctcpqasvpe qfasvpwnsf
      541 nrevlkalyg fapismhcnk ssavrfqgew drqplpevvs rleeptphcp asraqrpagp
      601 tvlnigggkg
//
LOCUS       XP_061010203             467 aa            linear   MAM 02-DEC-2023
DEFINITION  retinoic acid receptor RXR-alpha isoform X1 [Dama dama].
ACCESSION   XP_061010203
VERSION     XP_061010203.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154220.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..467
                     /product="retinoic acid receptor RXR-alpha isoform X1"
                     /calculated_mol_wt=50911
     Region          18..132
                     /region_name="Nuc_recep-AF1"
                     /note="Nuclear/hormone receptor activator site AF-1;
                     pfam11825"
                     /db_xref="CDD:463363"
     Region          138..214
                     /region_name="NR_DBD_RXR"
                     /note="DNA-binding domain of retinoid X receptor (RXR) is
                     composed of two C4-type zinc fingers; cd06956"
                     /db_xref="CDD:143514"
     Site            order(140,143,157,160,176,182,192,195)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143514"
     Site            order(145,186..187,189,191)
                     /site_type="other"
                     /note="RXR/ECR heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:143514"
     Site            order(149..152,158..159,161,163,165..166,169,177,189..190,
                     193,196,209..211,213..214)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143514"
     Site            order(171,194,197..198,201..202,206..208,212..214)
                     /site_type="other"
                     /note="RXR/PPAR heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:143514"
     Site            order(187..188,191)
                     /site_type="other"
                     /note="RXR/RXR homodimer interface DR1 [polypeptide
                     binding]"
                     /db_xref="CDD:143514"
     Site            208..213
                     /site_type="other"
                     /note="RXR/RXR homodimer interface DR2 [polypeptide
                     binding]"
                     /db_xref="CDD:143514"
     Site            order(212,214)
                     /site_type="other"
                     /note="RXR/RAR heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:143514"
     Region          234..445
                     /region_name="NR_LBD_RXR_like"
                     /note="The ligand binding domain of the retinoid X
                     receptor and Ultraspiracle, members of nuclear receptor
                     superfamily; cd06943"
                     /db_xref="CDD:132741"
     Site            order(273..274,276..277,280,314,318,321,331..332,347,437,
                     440..441)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:132741"
     Site            order(282,285,289,294,299..300,302..303,307)
                     /site_type="other"
                     /note="coactivator recognition site [polypeptide binding]"
                     /db_xref="CDD:132741"
     Site            order(353,357,361,378,384,398..399,402..403,406,420..421,
                     424..425,427..429,431..432,435,439)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:132741"
     Site            order(353,357,361,384,386,395,402,406,418,421..422,
                     425..428,431..432,435,439)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:132741"
     CDS             1..467
                     /gene="RXRA"
                     /coded_by="XM_061154220.1:58..1461"
                     /db_xref="GeneID:133064308"
ORIGIN      
        1 mdtkhflpld fstqvnsssl sspaarssma apslhpslgp sigsslgspg qlhspistls
       61 spingmgppf svisspmgph smsvpttptl gfgtgspqls spmnpvssse dikpplglng
      121 vlkvpahpsg nmasftkhic aicgdrssgk hygvyscegc kgffkrtvrk dltytcrdnk
      181 dclidkrqrn rcqycryqkc lamgmkreav qeerqrgkdr gegevestss anedmpveki
      241 leaelavepk tetyveasvg lnpsspndpv tnicqaadkq lftlvewakr iphfselpld
      301 dqvillragw nelliasfsh rsiavkdgil latglhvhrn sahsagvgai fdrvltelvs
      361 kmrdmqmdkt elgclraivl fnpdskglsn paevealrek vyasleayck hkypeqpgrf
      421 aklllrlpal rsiglkcleh lfffkligdt pidtflmeml eaphqmt
//
LOCUS       XP_061010204             464 aa            linear   MAM 02-DEC-2023
DEFINITION  retinoic acid receptor RXR-alpha isoform X2 [Dama dama].
ACCESSION   XP_061010204
VERSION     XP_061010204.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154221.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..464
                     /product="retinoic acid receptor RXR-alpha isoform X2"
                     /calculated_mol_wt=50530
     Region          15..129
                     /region_name="Nuc_recep-AF1"
                     /note="Nuclear/hormone receptor activator site AF-1;
                     pfam11825"
                     /db_xref="CDD:463363"
     Region          135..211
                     /region_name="NR_DBD_RXR"
                     /note="DNA-binding domain of retinoid X receptor (RXR) is
                     composed of two C4-type zinc fingers; cd06956"
                     /db_xref="CDD:143514"
     Site            order(137,140,154,157,173,179,189,192)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143514"
     Site            order(142,183..184,186,188)
                     /site_type="other"
                     /note="RXR/ECR heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:143514"
     Site            order(146..149,155..156,158,160,162..163,166,174,186..187,
                     190,193,206..208,210..211)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143514"
     Site            order(168,191,194..195,198..199,203..205,209..211)
                     /site_type="other"
                     /note="RXR/PPAR heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:143514"
     Site            order(184..185,188)
                     /site_type="other"
                     /note="RXR/RXR homodimer interface DR1 [polypeptide
                     binding]"
                     /db_xref="CDD:143514"
     Site            205..210
                     /site_type="other"
                     /note="RXR/RXR homodimer interface DR2 [polypeptide
                     binding]"
                     /db_xref="CDD:143514"
     Site            order(209,211)
                     /site_type="other"
                     /note="RXR/RAR heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:143514"
     Region          231..442
                     /region_name="NR_LBD_RXR_like"
                     /note="The ligand binding domain of the retinoid X
                     receptor and Ultraspiracle, members of nuclear receptor
                     superfamily; cd06943"
                     /db_xref="CDD:132741"
     Site            order(270..271,273..274,277,311,315,318,328..329,344,434,
                     437..438)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:132741"
     Site            order(279,282,286,291,296..297,299..300,304)
                     /site_type="other"
                     /note="coactivator recognition site [polypeptide binding]"
                     /db_xref="CDD:132741"
     Site            order(350,354,358,375,381,395..396,399..400,403,417..418,
                     421..422,424..426,428..429,432,436)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:132741"
     Site            order(350,354,358,381,383,392,399,403,415,418..419,
                     422..425,428..429,432,436)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:132741"
     CDS             1..464
                     /gene="RXRA"
                     /coded_by="XM_061154221.1:89..1483"
                     /db_xref="GeneID:133064308"
ORIGIN      
        1 mpetfpdfst qvnssslssp aarssmaaps lhpslgpsig sslgspgqlh spistlsspi
       61 ngmgppfsvi sspmgphsms vpttptlgfg tgspqlsspm npvsssedik pplglngvlk
      121 vpahpsgnma sftkhicaic gdrssgkhyg vyscegckgf fkrtvrkdlt ytcrdnkdcl
      181 idkrqrnrcq ycryqkclam gmkreavqee rqrgkdrgeg evestssane dmpvekilea
      241 elavepktet yveasvglnp sspndpvtni cqaadkqlft lvewakriph fselplddqv
      301 illragwnel liasfshrsi avkdgillat glhvhrnsah sagvgaifdr vltelvskmr
      361 dmqmdktelg clraivlfnp dskglsnpae vealrekvya sleayckhky peqpgrfakl
      421 llrlpalrsi glkclehlff fkligdtpid tflmemleap hqmt
//
LOCUS       XP_061010205             439 aa            linear   MAM 02-DEC-2023
DEFINITION  retinoic acid receptor RXR-alpha isoform X3 [Dama dama].
ACCESSION   XP_061010205
VERSION     XP_061010205.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154222.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..439
                     /product="retinoic acid receptor RXR-alpha isoform X3"
                     /calculated_mol_wt=47917
     Region          1..104
                     /region_name="Nuc_recep-AF1"
                     /note="Nuclear/hormone receptor activator site AF-1;
                     pfam11825"
                     /db_xref="CDD:463363"
     Region          110..186
                     /region_name="NR_DBD_RXR"
                     /note="DNA-binding domain of retinoid X receptor (RXR) is
                     composed of two C4-type zinc fingers; cd06956"
                     /db_xref="CDD:143514"
     Site            order(112,115,129,132,148,154,164,167)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143514"
     Site            order(117,158..159,161,163)
                     /site_type="other"
                     /note="RXR/ECR heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:143514"
     Site            order(121..124,130..131,133,135,137..138,141,149,161..162,
                     165,168,181..183,185..186)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143514"
     Site            order(143,166,169..170,173..174,178..180,184..186)
                     /site_type="other"
                     /note="RXR/PPAR heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:143514"
     Site            order(159..160,163)
                     /site_type="other"
                     /note="RXR/RXR homodimer interface DR1 [polypeptide
                     binding]"
                     /db_xref="CDD:143514"
     Site            180..185
                     /site_type="other"
                     /note="RXR/RXR homodimer interface DR2 [polypeptide
                     binding]"
                     /db_xref="CDD:143514"
     Site            order(184,186)
                     /site_type="other"
                     /note="RXR/RAR heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:143514"
     Region          206..417
                     /region_name="NR_LBD_RXR_like"
                     /note="The ligand binding domain of the retinoid X
                     receptor and Ultraspiracle, members of nuclear receptor
                     superfamily; cd06943"
                     /db_xref="CDD:132741"
     Site            order(245..246,248..249,252,286,290,293,303..304,319,409,
                     412..413)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:132741"
     Site            order(254,257,261,266,271..272,274..275,279)
                     /site_type="other"
                     /note="coactivator recognition site [polypeptide binding]"
                     /db_xref="CDD:132741"
     Site            order(325,329,333,350,356,370..371,374..375,378,392..393,
                     396..397,399..401,403..404,407,411)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:132741"
     Site            order(325,329,333,356,358,367,374,378,390,393..394,
                     397..400,403..404,407,411)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:132741"
     CDS             1..439
                     /gene="RXRA"
                     /coded_by="XM_061154222.1:194..1513"
                     /db_xref="GeneID:133064308"
ORIGIN      
        1 maapslhpsl gpsigsslgs pgqlhspist lsspingmgp pfsvisspmg phsmsvpttp
       61 tlgfgtgspq lsspmnpvss sedikpplgl ngvlkvpahp sgnmasftkh icaicgdrss
      121 gkhygvysce gckgffkrtv rkdltytcrd nkdclidkrq rnrcqycryq kclamgmkre
      181 avqeerqrgk drgegevest ssanedmpve kileaelave pktetyveas vglnpsspnd
      241 pvtnicqaad kqlftlvewa kriphfselp lddqvillra gwnelliasf shrsiavkdg
      301 illatglhvh rnsahsagvg aifdrvltel vskmrdmqmd ktelgclrai vlfnpdskgl
      361 snpaevealr ekvyasleay ckhkypeqpg rfaklllrlp alrsiglkcl ehlfffklig
      421 dtpidtflme mleaphqmt
//
LOCUS       XP_061010206             439 aa            linear   MAM 02-DEC-2023
DEFINITION  retinoic acid receptor RXR-alpha isoform X3 [Dama dama].
ACCESSION   XP_061010206
VERSION     XP_061010206.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154223.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..439
                     /product="retinoic acid receptor RXR-alpha isoform X3"
                     /calculated_mol_wt=47917
     Region          1..104
                     /region_name="Nuc_recep-AF1"
                     /note="Nuclear/hormone receptor activator site AF-1;
                     pfam11825"
                     /db_xref="CDD:463363"
     Region          110..186
                     /region_name="NR_DBD_RXR"
                     /note="DNA-binding domain of retinoid X receptor (RXR) is
                     composed of two C4-type zinc fingers; cd06956"
                     /db_xref="CDD:143514"
     Site            order(112,115,129,132,148,154,164,167)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143514"
     Site            order(117,158..159,161,163)
                     /site_type="other"
                     /note="RXR/ECR heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:143514"
     Site            order(121..124,130..131,133,135,137..138,141,149,161..162,
                     165,168,181..183,185..186)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143514"
     Site            order(143,166,169..170,173..174,178..180,184..186)
                     /site_type="other"
                     /note="RXR/PPAR heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:143514"
     Site            order(159..160,163)
                     /site_type="other"
                     /note="RXR/RXR homodimer interface DR1 [polypeptide
                     binding]"
                     /db_xref="CDD:143514"
     Site            180..185
                     /site_type="other"
                     /note="RXR/RXR homodimer interface DR2 [polypeptide
                     binding]"
                     /db_xref="CDD:143514"
     Site            order(184,186)
                     /site_type="other"
                     /note="RXR/RAR heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:143514"
     Region          206..417
                     /region_name="NR_LBD_RXR_like"
                     /note="The ligand binding domain of the retinoid X
                     receptor and Ultraspiracle, members of nuclear receptor
                     superfamily; cd06943"
                     /db_xref="CDD:132741"
     Site            order(245..246,248..249,252,286,290,293,303..304,319,409,
                     412..413)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:132741"
     Site            order(254,257,261,266,271..272,274..275,279)
                     /site_type="other"
                     /note="coactivator recognition site [polypeptide binding]"
                     /db_xref="CDD:132741"
     Site            order(325,329,333,350,356,370..371,374..375,378,392..393,
                     396..397,399..401,403..404,407,411)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:132741"
     Site            order(325,329,333,356,358,367,374,378,390,393..394,
                     397..400,403..404,407,411)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:132741"
     CDS             1..439
                     /gene="RXRA"
                     /coded_by="XM_061154223.1:138..1457"
                     /db_xref="GeneID:133064308"
ORIGIN      
        1 maapslhpsl gpsigsslgs pgqlhspist lsspingmgp pfsvisspmg phsmsvpttp
       61 tlgfgtgspq lsspmnpvss sedikpplgl ngvlkvpahp sgnmasftkh icaicgdrss
      121 gkhygvysce gckgffkrtv rkdltytcrd nkdclidkrq rnrcqycryq kclamgmkre
      181 avqeerqrgk drgegevest ssanedmpve kileaelave pktetyveas vglnpsspnd
      241 pvtnicqaad kqlftlvewa kriphfselp lddqvillra gwnelliasf shrsiavkdg
      301 illatglhvh rnsahsagvg aifdrvltel vskmrdmqmd ktelgclrai vlfnpdskgl
      361 snpaevealr ekvyasleay ckhkypeqpg rfaklllrlp alrsiglkcl ehlfffklig
      421 dtpidtflme mleaphqmt
//
LOCUS       XP_061010207             439 aa            linear   MAM 02-DEC-2023
DEFINITION  retinoic acid receptor RXR-alpha isoform X3 [Dama dama].
ACCESSION   XP_061010207
VERSION     XP_061010207.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154224.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..439
                     /product="retinoic acid receptor RXR-alpha isoform X3"
                     /calculated_mol_wt=47917
     Region          1..104
                     /region_name="Nuc_recep-AF1"
                     /note="Nuclear/hormone receptor activator site AF-1;
                     pfam11825"
                     /db_xref="CDD:463363"
     Region          110..186
                     /region_name="NR_DBD_RXR"
                     /note="DNA-binding domain of retinoid X receptor (RXR) is
                     composed of two C4-type zinc fingers; cd06956"
                     /db_xref="CDD:143514"
     Site            order(112,115,129,132,148,154,164,167)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143514"
     Site            order(117,158..159,161,163)
                     /site_type="other"
                     /note="RXR/ECR heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:143514"
     Site            order(121..124,130..131,133,135,137..138,141,149,161..162,
                     165,168,181..183,185..186)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143514"
     Site            order(143,166,169..170,173..174,178..180,184..186)
                     /site_type="other"
                     /note="RXR/PPAR heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:143514"
     Site            order(159..160,163)
                     /site_type="other"
                     /note="RXR/RXR homodimer interface DR1 [polypeptide
                     binding]"
                     /db_xref="CDD:143514"
     Site            180..185
                     /site_type="other"
                     /note="RXR/RXR homodimer interface DR2 [polypeptide
                     binding]"
                     /db_xref="CDD:143514"
     Site            order(184,186)
                     /site_type="other"
                     /note="RXR/RAR heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:143514"
     Region          206..417
                     /region_name="NR_LBD_RXR_like"
                     /note="The ligand binding domain of the retinoid X
                     receptor and Ultraspiracle, members of nuclear receptor
                     superfamily; cd06943"
                     /db_xref="CDD:132741"
     Site            order(245..246,248..249,252,286,290,293,303..304,319,409,
                     412..413)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:132741"
     Site            order(254,257,261,266,271..272,274..275,279)
                     /site_type="other"
                     /note="coactivator recognition site [polypeptide binding]"
                     /db_xref="CDD:132741"
     Site            order(325,329,333,350,356,370..371,374..375,378,392..393,
                     396..397,399..401,403..404,407,411)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:132741"
     Site            order(325,329,333,356,358,367,374,378,390,393..394,
                     397..400,403..404,407,411)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:132741"
     CDS             1..439
                     /gene="RXRA"
                     /coded_by="XM_061154224.1:170..1489"
                     /db_xref="GeneID:133064308"
ORIGIN      
        1 maapslhpsl gpsigsslgs pgqlhspist lsspingmgp pfsvisspmg phsmsvpttp
       61 tlgfgtgspq lsspmnpvss sedikpplgl ngvlkvpahp sgnmasftkh icaicgdrss
      121 gkhygvysce gckgffkrtv rkdltytcrd nkdclidkrq rnrcqycryq kclamgmkre
      181 avqeerqrgk drgegevest ssanedmpve kileaelave pktetyveas vglnpsspnd
      241 pvtnicqaad kqlftlvewa kriphfselp lddqvillra gwnelliasf shrsiavkdg
      301 illatglhvh rnsahsagvg aifdrvltel vskmrdmqmd ktelgclrai vlfnpdskgl
      361 snpaevealr ekvyasleay ckhkypeqpg rfaklllrlp alrsiglkcl ehlfffklig
      421 dtpidtflme mleaphqmt
//
LOCUS       XP_061010208             439 aa            linear   MAM 02-DEC-2023
DEFINITION  retinoic acid receptor RXR-alpha isoform X3 [Dama dama].
ACCESSION   XP_061010208
VERSION     XP_061010208.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154225.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..439
                     /product="retinoic acid receptor RXR-alpha isoform X3"
                     /calculated_mol_wt=47917
     Region          1..104
                     /region_name="Nuc_recep-AF1"
                     /note="Nuclear/hormone receptor activator site AF-1;
                     pfam11825"
                     /db_xref="CDD:463363"
     Region          110..186
                     /region_name="NR_DBD_RXR"
                     /note="DNA-binding domain of retinoid X receptor (RXR) is
                     composed of two C4-type zinc fingers; cd06956"
                     /db_xref="CDD:143514"
     Site            order(112,115,129,132,148,154,164,167)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143514"
     Site            order(117,158..159,161,163)
                     /site_type="other"
                     /note="RXR/ECR heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:143514"
     Site            order(121..124,130..131,133,135,137..138,141,149,161..162,
                     165,168,181..183,185..186)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143514"
     Site            order(143,166,169..170,173..174,178..180,184..186)
                     /site_type="other"
                     /note="RXR/PPAR heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:143514"
     Site            order(159..160,163)
                     /site_type="other"
                     /note="RXR/RXR homodimer interface DR1 [polypeptide
                     binding]"
                     /db_xref="CDD:143514"
     Site            180..185
                     /site_type="other"
                     /note="RXR/RXR homodimer interface DR2 [polypeptide
                     binding]"
                     /db_xref="CDD:143514"
     Site            order(184,186)
                     /site_type="other"
                     /note="RXR/RAR heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:143514"
     Region          206..417
                     /region_name="NR_LBD_RXR_like"
                     /note="The ligand binding domain of the retinoid X
                     receptor and Ultraspiracle, members of nuclear receptor
                     superfamily; cd06943"
                     /db_xref="CDD:132741"
     Site            order(245..246,248..249,252,286,290,293,303..304,319,409,
                     412..413)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:132741"
     Site            order(254,257,261,266,271..272,274..275,279)
                     /site_type="other"
                     /note="coactivator recognition site [polypeptide binding]"
                     /db_xref="CDD:132741"
     Site            order(325,329,333,350,356,370..371,374..375,378,392..393,
                     396..397,399..401,403..404,407,411)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:132741"
     Site            order(325,329,333,356,358,367,374,378,390,393..394,
                     397..400,403..404,407,411)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:132741"
     CDS             1..439
                     /gene="RXRA"
                     /coded_by="XM_061154225.1:81..1400"
                     /db_xref="GeneID:133064308"
ORIGIN      
        1 maapslhpsl gpsigsslgs pgqlhspist lsspingmgp pfsvisspmg phsmsvpttp
       61 tlgfgtgspq lsspmnpvss sedikpplgl ngvlkvpahp sgnmasftkh icaicgdrss
      121 gkhygvysce gckgffkrtv rkdltytcrd nkdclidkrq rnrcqycryq kclamgmkre
      181 avqeerqrgk drgegevest ssanedmpve kileaelave pktetyveas vglnpsspnd
      241 pvtnicqaad kqlftlvewa kriphfselp lddqvillra gwnelliasf shrsiavkdg
      301 illatglhvh rnsahsagvg aifdrvltel vskmrdmqmd ktelgclrai vlfnpdskgl
      361 snpaevealr ekvyasleay ckhkypeqpg rfaklllrlp alrsiglkcl ehlfffklig
      421 dtpidtflme mleaphqmt
//
LOCUS       XP_061010209             334 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 5 [Dama dama].
ACCESSION   XP_061010209
VERSION     XP_061010209.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154226.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..334
                     /product="WD repeat-containing protein 5"
                     /calculated_mol_wt=36426
     Region          <36..330
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          48..85
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          91..127
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          132..168
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          175..210
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          217..253
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          261..298
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          304..330
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..334
                     /gene="WDR5"
                     /coded_by="XM_061154226.1:258..1262"
                     /db_xref="GeneID:133064309"
ORIGIN      
        1 mateekkpet eaarapptps ssatqskptp vkpnyalkft laghtkavss vkfspngewl
       61 asssadklik iwgaydgkfe ktisghklgi sdvawssdsn llvsasddkt lkiwdvssgk
      121 clktlkghsn yvfccnfnpq snlivsgsfd esvriwdvkt gkclktlpah sdpvsavhfn
      181 rdgslivsss ydglcriwdt asgqclktli dddnppvsfv kfspngkyil aatldntlkl
      241 wdyskgkclk tytghkneky cifanfsvtg gkwivsgsed nlvyiwnlqt keivqklqgh
      301 tdvvistach pteniiasaa lendktiklw ksdc
//
LOCUS       XP_061010212             221 aa            linear   MAM 02-DEC-2023
DEFINITION  protein myomaker [Dama dama].
ACCESSION   XP_061010212
VERSION     XP_061010212.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154229.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..221
                     /product="protein myomaker"
                     /calculated_mol_wt=24548
     Region          5..185
                     /region_name="DUF3522"
                     /note="Protein of unknown function (DUF3522); pfam12036"
                     /db_xref="CDD:463441"
     CDS             1..221
                     /gene="MYMK"
                     /coded_by="XM_061154229.1:1..666"
                     /db_xref="GeneID:133064310"
ORIGIN      
        1 mgtlmaklll ptvsslaflp tvsiaakrrf hmeamvylft tfflvlhhac tgpglsvlcf
       61 lrhdvleyfs vygtalsmwv slmaladfde pkrstlvmfg vltiavriyh drwgygvysg
      121 pigsailiia akwlpqmket rrlfpdksvy tqqigpglcf galalmlrff fedwdytyvh
      181 sfyhcalams ftlllpkvnk kagsagppak ldcstlccac v
//
LOCUS       XP_061010213             164 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM163B [Dama dama].
ACCESSION   XP_061010213
VERSION     XP_061010213.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154230.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..164
                     /product="protein FAM163B"
                     /calculated_mol_wt=17583
     Region          1..164
                     /region_name="FAM163"
                     /note="FAM163 family; pfam15069"
                     /db_xref="CDD:464484"
     CDS             1..164
                     /gene="FAM163B"
                     /coded_by="XM_061154230.1:1..495"
                     /db_xref="GeneID:133064311"
ORIGIN      
        1 mtagtvvitg gilatvillc iiavlcycrl qyycckkdep eedeeepdfa vhahlpplhp
       61 trslvlsngp alypaastsf sqrspqaral crscsrsepp afflqepede gvsnggerva
      121 yrsisqedvg pppgafgglq alnpnrlsam reafsrsrsv stdv
//
LOCUS       XP_061010214             125 aa            linear   MAM 02-DEC-2023
DEFINITION  mitochondrial import inner membrane translocase subunit TIM16 [Dama
            dama].
ACCESSION   XP_061010214
VERSION     XP_061010214.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154231.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..125
                     /product="mitochondrial import inner membrane translocase
                     subunit TIM16"
                     /calculated_mol_wt=13750
     Region          1..125
                     /region_name="DnaJ"
                     /note="DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock
                     protein 40) proteins are highly conserved and play crucial
                     roles in protein translation, folding, unfolding,
                     translocation, and degradation. They act primarily by
                     stimulating the ATPase activity of Hsp70s; cl02542"
                     /db_xref="CDD:413365"
     CDS             1..125
                     /gene="PAM16"
                     /coded_by="XM_061154231.1:1016..1393"
                     /db_xref="GeneID:133064312"
ORIGIN      
        1 makylaqiiv mgaqvvgraf aralrqefaa sraaadargr aghqsaaasn lsglslqeaq
       61 qilnvsklsp eeiqknyehl fkvndksvgg sfylqskvvr akerleeelr iqaqedrerq
      121 qppkt
//
LOCUS       XP_061010215              84 aa            linear   MAM 02-DEC-2023
DEFINITION  putative uncharacterized protein BRD3OS [Dama dama].
ACCESSION   XP_061010215
VERSION     XP_061010215.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154232.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..84
                     /product="putative uncharacterized protein BRD3OS"
                     /calculated_mol_wt=9562
     CDS             1..84
                     /gene="BRD3OS"
                     /coded_by="XM_061154232.1:639..893"
                     /db_xref="GeneID:133064313"
ORIGIN      
        1 msgrvplaek alsesyarlr yrdtslliwq qqqqklasal pgtylsrsrs mwysqygnea
       61 ilvrdrnkld vsrdtgqskf csvm
//
LOCUS       XP_061010216             547 aa            linear   MAM 02-DEC-2023
DEFINITION  solute carrier family 2, facilitated glucose transporter member 6
            isoform X1 [Dama dama].
ACCESSION   XP_061010216
VERSION     XP_061010216.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154233.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..547
                     /product="solute carrier family 2, facilitated glucose
                     transporter member 6 isoform X1"
                     /calculated_mol_wt=58787
     Region          39..533
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(52..53,56..57,60,96,146..147,149..151,154,174,
                     177..178,181,323,326..327,330..332,335,362,366,449..450,
                     454,458,474,477..478,481..482,485)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340992"
     CDS             1..547
                     /gene="SLC2A6"
                     /coded_by="XM_061154233.1:77..1720"
                     /db_xref="GeneID:133064316"
ORIGIN      
        1 mqepllgaeg rdydtfpekp ppspgertrv gvlqnkrvfl atfaavlgnf sfgyalvyts
       61 pvipalehss dpnlnltktq aswfgsvftl gaaagglsam vlndllgrkl simfsavpsa
      121 agyalmagah glwmlllgrm ltgfagglta acipvyvsei appsvrgalg atpqlmavfg
      181 slslyalarq aplsmgfcrq eywgglpcps pgessgfrdq tqvscivgll lpwrwlavag
      241 egpvlvmvll lscmpnsprf llskgrdaea lqalawlrga dadtrwefeq iqdtvrrqss
      301 hlswaeardp hmyrpivial lmrflqqltg itpilvylqs ifdstavllp pkddaaivga
      361 vrllsvliaa ltmdlagrkv llfisaagmf aanltlglyv hfgpkslapn stvgleraal
      421 vgteqplatp tsyltlvpll atmlfimgya mgwgpitwll mseilplrar gvasglcvlv
      481 swltafaltk sfllvtnafg lqapffffaa vclvnlaftg ccvpetkgrs leqiesffrt
      541 errsflh
//
LOCUS       XP_061010217             509 aa            linear   MAM 02-DEC-2023
DEFINITION  solute carrier family 2, facilitated glucose transporter member 6
            isoform X2 [Dama dama].
ACCESSION   XP_061010217
VERSION     XP_061010217.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154234.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..509
                     /product="solute carrier family 2, facilitated glucose
                     transporter member 6 isoform X2"
                     /calculated_mol_wt=54628
     Region          39..495
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(52..53,56..57,60,96,146..147,149..151,154,174,
                     177..178,181,285,288..289,292..294,297,324,328,411..412,
                     416,420,436,439..440,443..444,447)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340992"
     CDS             1..509
                     /gene="SLC2A6"
                     /coded_by="XM_061154234.1:77..1606"
                     /db_xref="GeneID:133064316"
ORIGIN      
        1 mqepllgaeg rdydtfpekp ppspgertrv gvlqnkrvfl atfaavlgnf sfgyalvyts
       61 pvipalehss dpnlnltktq aswfgsvftl gaaagglsam vlndllgrkl simfsavpsa
      121 agyalmagah glwmlllgrm ltgfagglta acipvyvsei appsvrgalg atpqlmavfg
      181 slslyalarq aplsmgfcrq eywgglpcps pgessgfrdq tqvscigrda ealqalawlr
      241 gadadtrwef eqiqdtvrrq sshlswaear dphmyrpivi allmrflqql tgitpilvyl
      301 qsifdstavl lppkddaaiv gavrllsvli aaltmdlagr kvllfisaag mfaanltlgl
      361 yvhfgpksla pnstvglera alvgteqpla tptsyltlvp llatmlfimg yamgwgpitw
      421 llmseilplr argvasglcv lvswltafal tksfllvtna fglqapffff aavclvnlaf
      481 tgccvpetkg rsleqiesff rterrsflh
//
LOCUS       XP_061010218             507 aa            linear   MAM 02-DEC-2023
DEFINITION  solute carrier family 2, facilitated glucose transporter member 6
            isoform X3 [Dama dama].
ACCESSION   XP_061010218
VERSION     XP_061010218.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154235.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..507
                     /product="solute carrier family 2, facilitated glucose
                     transporter member 6 isoform X3"
                     /calculated_mol_wt=54458
     Region          39..493
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(52..53,56..57,60,96,146..147,149..151,154,174,
                     177..178,181,283,286..287,290..292,295,322,326,409..410,
                     414,418,434,437..438,441..442,445)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340992"
     CDS             1..507
                     /gene="SLC2A6"
                     /coded_by="XM_061154235.1:77..1600"
                     /db_xref="GeneID:133064316"
ORIGIN      
        1 mqepllgaeg rdydtfpekp ppspgertrv gvlqnkrvfl atfaavlgnf sfgyalvyts
       61 pvipalehss dpnlnltktq aswfgsvftl gaaagglsam vlndllgrkl simfsavpsa
      121 agyalmagah glwmlllgrm ltgfagglta acipvyvsei appsvrgalg atpqlmavfg
      181 slslyalgll lpwrwlavag egpvlvmvll lscmpnsprf llskgrdaea lqalawlrga
      241 dadtrwefeq iqdtvrrqss hlswaeardp hmyrpivial lmrflqqltg itpilvylqs
      301 ifdstavllp pkddaaivga vrllsvliaa ltmdlagrkv llfisaagmf aanltlglyv
      361 hfgpkslapn stvgleraal vgteqplatp tsyltlvpll atmlfimgya mgwgpitwll
      421 mseilplrar gvasglcvlv swltafaltk sfllvtnafg lqapffffaa vclvnlaftg
      481 ccvpetkgrs leqiesffrt errsflh
//
LOCUS       XP_061010219             172 aa            linear   MAM 02-DEC-2023
DEFINITION  calcium channel flower homolog isoform X1 [Dama dama].
ACCESSION   XP_061010219
VERSION     XP_061010219.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154236.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..172
                     /product="calcium channel flower homolog isoform X1"
                     /calculated_mol_wt=18146
     Region          35..143
                     /region_name="Cg6151-P"
                     /note="Uncharacterized conserved protein CG6151-P;
                     smart01077"
                     /db_xref="CDD:198145"
     CDS             1..172
                     /gene="CACFD1"
                     /coded_by="XM_061154236.1:39..557"
                     /db_xref="GeneID:133064318"
ORIGIN      
        1 msgaggaava passaqpaqe egmtwwfrwl crlsgvlgav scaisglfnc itihplniaa
       61 gvwmimnasv lllceapfcc qfmefanava akadrlrswq kavfycgmav vpivisltlt
      121 tllgnaiafa tgvlyglsal gkkgdaisya riqqqrqqvd eekladaleg el
//
LOCUS       XP_061010220             138 aa            linear   MAM 02-DEC-2023
DEFINITION  calcium channel flower homolog isoform X2 [Dama dama].
ACCESSION   XP_061010220
VERSION     XP_061010220.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154237.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..138
                     /product="calcium channel flower homolog isoform X2"
                     /calculated_mol_wt=14699
     Region          8..109
                     /region_name="Cg6151-P"
                     /note="Uncharacterized conserved protein CG6151-P;
                     smart01077"
                     /db_xref="CDD:198145"
     CDS             1..138
                     /gene="CACFD1"
                     /coded_by="XM_061154237.1:207..623"
                     /db_xref="GeneID:133064318"
ORIGIN      
        1 mlctlpacai sglfncitih plniaagvwm imnasvlllc eapfccqfme fanavaakad
       61 rlrswqkavf ycgmavvpiv isltlttllg naiafatgvl yglsalgkkg daisyariqq
      121 qrqqvdeekl adalegel
//
LOCUS       XP_061010221            1480 aa            linear   MAM 02-DEC-2023
DEFINITION  A disintegrin and metalloproteinase with thrombospondin motifs 13
            [Dama dama].
ACCESSION   XP_061010221
VERSION     XP_061010221.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154238.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1480
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1480
                     /product="A disintegrin and metalloproteinase with
                     thrombospondin motifs 13"
                     /calculated_mol_wt=157814
     Region          92..298
                     /region_name="ZnMc_ADAMTS_like"
                     /note="Zinc-dependent metalloprotease, ADAMTS_like
                     subgroup. ADAMs (A Disintegrin And Metalloprotease) are
                     glycoproteins, which play roles in cell signaling, cell
                     fusion, and cell-cell interactions. This particular
                     subfamily represents domain architectures that...;
                     cd04273"
                     /db_xref="CDD:239801"
     Site            order(236..237,240,246)
                     /site_type="active"
                     /db_xref="CDD:239801"
     Region          316..386
                     /region_name="ADAMTS_CR_2"
                     /note="ADAMTS cysteine-rich domain 2; pfam17771"
                     /db_xref="CDD:465496"
     Region          402..454
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          456..571
                     /region_name="ADAMTS_CR_3"
                     /note="ADAMTS cysteine-rich domain; pfam19236"
                     /db_xref="CDD:437068"
     Region          573..696
                     /region_name="ADAMTS_spacer1"
                     /note="ADAM-TS Spacer 1; pfam05986"
                     /db_xref="CDD:461796"
     Region          <699..1085
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          762..819
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          966..1022
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1026..1083
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1087..1143
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1147..1201
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     CDS             1..1480
                     /gene="ADAMTS13"
                     /coded_by="XM_061154238.1:72..4514"
                     /db_xref="GeneID:133064319"
ORIGIN      
        1 mapsargtlt salfllscwa lpdprqgpsl paqpapclaw pppllpvsph ssqqflrale
       61 pgdvtshfgp daafegrpaa prlrrraagn vlhlellvaa gpdvhqahge dteryvltnl
      121 ntgsellrdp slgaqfrvhl vkmviltqle dapkitanit asllsvcews rtvnpeddtd
      181 pahadlvlyi trfdlelpdg nrqvrgvtql ggacssswsc litedtgfdl gltiaheigh
      241 sfglehdgvp gsgcgpsghv masdgaapal alggpawspc srrqllslls agrarcvwdp
      301 pgprsgpagr pleaqpglyy gadeqcriaf gptavactfr gehldmcqal schtdpldps
      361 scsrllipll dgtecgvgkw cskgtcrsla elapvgvvhg hwsgwgpasp csrscgggvi
      421 trrrrcnnpr pafggrvcvg sdlqaemcnt qacektqlef mseqcaqtdg eplrlspggs
      481 aafyrwgtae qysegnalcr hvcravgesf mvrrgdhfld gtrcvpgdpq edgalslcvs
      541 gscrtfgcdg rmdsgqvrdv cqvcggdnst crpqngsfta grareyitfl tvtpnltsiy
      601 vvnrrplfth lavrvhgryv vagngsisas ttypslleds rveyrvtlne drlprreeih
      661 iqgptrgdme iqvyrrygee ygsaarpdit ftyfqpeqrq awawapvrgp csvscgagvr
      721 pvtyscrdqa rsewveaarc agsrppaaws etcapepcpp hwaagdfgpc sascggglre
      781 revrcveawg gllrpaprsr cralapqpaa vdtcnsqpcp qreadacssa cgadpavqnt
      841 tcmlgadgtg lpatagpcsa dekppapepc veaacppgwd qldvrspgqe aaspagsprl
      901 ealaahvwmp ltgpcsascg qglaelrfvc mdpalrtpvq eelcdlaskp esrreacqaa
      961 pcparwetra lapcpvtcgg gqvplavrcv rmdrgrlvsl phskcwpapr prpledcspe
     1021 pcparwrykl aacslscggg vaqrilycar ahgedtdeei lpdtqcqglp rpepqeacsp
     1081 epcpprwkvt slgpcsascg lgtatrsvac vrldsgkdte vdgtacaglg rpqasipcvv
     1141 adcayrwhvs awtqcsvscg egiqrrhdac lgprarvpvp adfcqqlpkp ltvrgcwagp
     1201 cagqetaspa pheeaatpgq ttaapaaspe wpqpharlls paqgrlpgpq espvetsvcg
     1261 rqhleptgii dmrgmvradc avaigrplge vvtlrvlegs lncsagemll lwgrlvwrkm
     1321 cgkpagmafs sqantllvrq rlvqagggvl lryssqlapg afprgcdtql fgprgeissp
     1381 lmspggrnvg gcrifidvap qariaihalt vdrgtrakgt dasyilirdi rslrtmafrg
     1441 qqtlyweseg sqaemefsqg fleaqaslrg qywalhtrap
//
LOCUS       XP_061010222             702 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: serine/threonine kinase-like domain-containing
            protein STKLD1 [Dama dama].
ACCESSION   XP_061010222
VERSION     XP_061010222.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154239.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..702
                     /product="LOW QUALITY PROTEIN: serine/threonine
                     kinase-like domain-containing protein STKLD1"
                     /calculated_mol_wt=77698
     Region          53..519
                     /region_name="SPS1"
                     /note="Serine/threonine protein kinase [Signal
                     transduction mechanisms]; COG0515"
                     /db_xref="CDD:440281"
     Region          60..318
                     /region_name="PKc"
                     /note="Catalytic domain of Protein Kinases; cd00180"
                     /db_xref="CDD:270622"
     Site            order(60..64,68,81,83,112,134..137,140,142,183,185,
                     187..188,190,201,204)
                     /site_type="active"
                     /db_xref="CDD:270622"
     Site            order(60..64,68,81,83,112,134..137,140,183,185,187..188,
                     190,201)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270622"
     Site            order(64,140,142,183,185,187,204)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270622"
     Site            200..206
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270622"
     CDS             1..702
                     /gene="STKLD1"
                     /coded_by="XM_061154239.1:39..2147"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /db_xref="GeneID:133064320"
ORIGIN      
        1 mgaprvgdgr tpdaghtaha qpgvrlrlgp evhpsapqrd reagsspqdp mekyqildwl
       61 npgalgvnlv veetktkakr vikqvecide hqanealeel mpllklqhah isiyqelfit
      121 wnseisslfl clvmeyhkes fqnvieknra aktamdsewl qnmlgqvlda ldylhhldlm
      181 hrnlkpsnia lvsndhcklq dlssntlmtd kakwnvraee dpfqkswmap ealsfsfsqk
      241 sdiwslgciv ldmascsfld tleamhlrkn irsspdslsg vlrtmeerkv pdaetfqsll
      301 plmlqadpge rvtvrdvihl tfvrsnfrss sialvlhrqv vpefiidmll dsnvastfev
      361 mqnfssrpev qhralkrllr mtddqlglpw paelvevllt tmkrhqrmld iqlcacglll
      421 rtlgqalaqd pgatvantst itpvllsvlq sypaeeqllv mvyslltiva sqggxlatde
      481 vqraglfedi lqrldslprn rdicihglsl lwalladavi vnkaplerap alvtevlatf
      541 pkdaemaeag csvlwllsll gcvqeqecae vadlllrsvq lcqdrvllln nayrglasla
      601 kaselaalqv vmpresgsgl dliletyqlh rddpevvesm clllahlaay keilselacs
      661 giqplvaeih grftsslelv syaasvlrrl eaaaqssseg sq
//
LOCUS       XP_061010223             413 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA exonuclease 4 [Dama dama].
ACCESSION   XP_061010223
VERSION     XP_061010223.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154240.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..413
                     /product="RNA exonuclease 4"
                     /calculated_mol_wt=45174
     Region          237..387
                     /region_name="REX4_like"
                     /note="DEDDh 3'-5' exonuclease domain of RNA exonuclease
                     4, XPMC2, Interferon Stimulated Gene product of 20 kDa,
                     and similar proteins; cd06144"
                     /db_xref="CDD:99847"
     Site            order(240..243,245,283,287,319..320,322..324,374,379)
                     /site_type="active"
                     /db_xref="CDD:99847"
     Site            order(240..243,245,283,287,319..320,322..323,374,379)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:99847"
     Site            order(240,242,324,374,379)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:99847"
     CDS             1..413
                     /gene="REXO4"
                     /coded_by="XM_061154240.1:1..1242"
                     /db_xref="GeneID:133064321"
ORIGIN      
        1 mvkarrpaaa rapraprapa peagpvrkpk rkkrvwrnka reaggtpgdd pgvvavrppk
       61 apedfspnwk alqellkqrs qtpqepllhs qmdskkqpqr vqqnrnwisd kakrdamgme
      121 ntdpeakgas gplgllmsrk ipaqpkekga nkrtsgdvsl qqggikqkkr kareptaplp
      181 pappteddiw fddvdpadie aaigpeaasi arkqlgqges svtlvkeraf ggltkalamd
      241 cemvgvgpkg eesivarvsl vnqhgrcvyd khvkptqpvt dyrtavsgvr padlaqgeef
      301 evvqrevadl lkgrilvgha lhndlkalfl ghpkrkirdt qkykpfrtqv ksgrpslkll
      361 aerilgiqvq qaehcsvqda qaamrlyvlv krdweslsgd rrspapkags qda
//
LOCUS       XP_061010224             269 aa            linear   MAM 02-DEC-2023
DEFINITION  surfeit locus protein 4 [Dama dama].
ACCESSION   XP_061010224
VERSION     XP_061010224.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154241.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..269
                     /product="surfeit locus protein 4"
                     /calculated_mol_wt=30260
     Region          4..269
                     /region_name="SURF4"
                     /note="SURF4 family; pfam02077"
                     /db_xref="CDD:111019"
     CDS             1..269
                     /gene="SURF4"
                     /coded_by="XM_061154241.1:112..921"
                     /db_xref="GeneID:133064322"
ORIGIN      
        1 mgqndlmgta edfadqflrv tkqylphvar lclistfled girmwfqwse qrdyidttws
       61 cgyllassfv flnllgqltg cilvlsrnfv qyacfglfgi ialqtiaysi lwdlkflmrn
      121 lalgggllll laesrsegks mfagvptvre ssprqymqlg grvllvlmfm tllhfdasff
      181 silqnivgta lmilvaigfk tklaaltlvv wlfainvyfn afwtipvykp mhdflkydff
      241 qtmsviggll lvvalgpggv smdekkkew
//
LOCUS       XP_061010225             257 aa            linear   MAM 02-DEC-2023
DEFINITION  surfeit locus protein 2 [Dama dama].
ACCESSION   XP_061010225
VERSION     XP_061010225.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154242.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..257
                     /product="surfeit locus protein 2"
                     /calculated_mol_wt=29457
     Region          5..225
                     /region_name="SURF2"
                     /note="Surfeit locus protein 2 (SURF2); pfam05477"
                     /db_xref="CDD:461659"
     CDS             1..257
                     /gene="SURF2"
                     /coded_by="XM_061154242.1:41..814"
                     /db_xref="GeneID:133064323"
ORIGIN      
        1 mnelpadvra flrehpslrl epgackvrca ltghelpcrl pelqlytrgk kyrrlvrasp
       61 afdyaefeph ivpstknphq lfcrltlrhi nkspehvlrh tqgrryrral hkyeecqerg
      121 vefvpacllh krrredqqdg dgpprpreaf weppssddga apsdsddsmt dlyppelftk
      181 kdleatgpgd stddfltkde derprgpret gpedsgalgv grervlkrrk krssslkkkf
      241 kshhrkpksf ssfkqsg
//
LOCUS       XP_061010226             308 aa            linear   MAM 02-DEC-2023
DEFINITION  surfeit locus protein 1 [Dama dama].
ACCESSION   XP_061010226
VERSION     XP_061010226.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154243.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..308
                     /product="surfeit locus protein 1"
                     /calculated_mol_wt=34165
     Region          82..296
                     /region_name="SURF1"
                     /note="SURF1 superfamily. Surf1/Shy1 has been implicated
                     in the posttranslational steps of the biogenesis of the
                     mitochondrially-encoded Cox1 subunit of cytochrome c
                     oxidase (complex IV). Cytochrome c oxidase (complex IV),
                     the terminal electron-transferring...; cd06662"
                     /db_xref="CDD:119401"
     CDS             1..308
                     /gene="LOC133064324"
                     /coded_by="XM_061154243.1:9..935"
                     /db_xref="GeneID:133064324"
ORIGIN      
        1 maaavlqlgl raaglrpllc aagagttpas vvwrsvlgia praglawrpg rcgsssaeat
       61 atksedesfl rwflllipvt afglgtwqvq rrkwklqlia elesrvmaep iplpadpmel
      121 knleyrpvkv rgyfdhskel ymmprtmvdp areareagrl ssaaesgayv vtpfhctelg
      181 itilvnrgfv prrkvnpdtr hkgqiegevd lvgmvrltet rkpfvpennp ernhwhyrdl
      241 eamarltgae pifidadfks tvpggpiggq trvslrnehl qyiitwyglc aatsylwckr
      301 flsrtpgv
//
LOCUS       XP_061010227             266 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein eL8 [Dama dama].
ACCESSION   XP_061010227
VERSION     XP_061010227.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154244.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..266
                     /product="large ribosomal subunit protein eL8"
                     /calculated_mol_wt=29909
     Region          16..266
                     /region_name="SNU13"
                     /note="U4/U6.U5 small nuclear ribonucleoprotein SNU13;
                     cl42391"
                     /db_xref="CDD:455736"
     Site            order(137..142,145,149,161..162,166,187,194..196,201..203)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:411046"
     Site            order(141,144..145,148,163,165..166,168..169,172)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:411046"
     CDS             1..266
                     /gene="RPL7A"
                     /coded_by="XM_061154244.1:113..913"
                     /db_xref="GeneID:133064325"
ORIGIN      
        1 mpkgkkakgk kvapapavvk kqeakkvvnp lfekrpknfg igqdiqpkrd ltrfvkwpry
       61 irlqrqrail ykrlkvppai nqftqaldrq tatqllklah kyrpetkqek kqrllaraek
      121 kaagkgdipt krppvlragv ntvttlvenk kaqlvviahd vdpielvvfl palcrkmgvp
      181 yciikgkarl grlvhrktct tvaftqvnse dksalaklve airtnyndry deirrhwggn
      241 vlgpksvari aklekakake latklg
//
LOCUS       XP_061010228             190 aa            linear   MAM 02-DEC-2023
DEFINITION  mediator of RNA polymerase II transcription subunit 22 isoform X1
            [Dama dama].
ACCESSION   XP_061010228
VERSION     XP_061010228.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154245.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..190
                     /product="mediator of RNA polymerase II transcription
                     subunit 22 isoform X1"
                     /calculated_mol_wt=22036
     Region          20..171
                     /region_name="Med22"
                     /note="Surfeit locus protein 5 subunit 22 of Mediator
                     complex; pfam06179"
                     /db_xref="CDD:461845"
     CDS             1..190
                     /gene="MED22"
                     /coded_by="XM_061154245.1:132..704"
                     /db_xref="GeneID:133064327"
ORIGIN      
        1 maqqralpqs ketllqsynk rlkddvksim dnfteiikta kiedetqvsr atqgeqdnye
       61 mhvraaniew kpearwhlpw qqftclrrlp gtlpsprspp rpsllatapc ecrgptsrvr
      121 ageslmklvs dlkqflilnd fpsvneaidq rrqqlralqe ecdrklvalr devsidlyel
      181 eeeyyssryk
//
LOCUS       XP_061010229             190 aa            linear   MAM 02-DEC-2023
DEFINITION  mediator of RNA polymerase II transcription subunit 22 isoform X1
            [Dama dama].
ACCESSION   XP_061010229
VERSION     XP_061010229.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154246.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..190
                     /product="mediator of RNA polymerase II transcription
                     subunit 22 isoform X1"
                     /calculated_mol_wt=22036
     Region          20..171
                     /region_name="Med22"
                     /note="Surfeit locus protein 5 subunit 22 of Mediator
                     complex; pfam06179"
                     /db_xref="CDD:461845"
     CDS             1..190
                     /gene="MED22"
                     /coded_by="XM_061154246.1:169..741"
                     /db_xref="GeneID:133064327"
ORIGIN      
        1 maqqralpqs ketllqsynk rlkddvksim dnfteiikta kiedetqvsr atqgeqdnye
       61 mhvraaniew kpearwhlpw qqftclrrlp gtlpsprspp rpsllatapc ecrgptsrvr
      121 ageslmklvs dlkqflilnd fpsvneaidq rrqqlralqe ecdrklvalr devsidlyel
      181 eeeyyssryk
//
LOCUS       XP_061010230             190 aa            linear   MAM 02-DEC-2023
DEFINITION  mediator of RNA polymerase II transcription subunit 22 isoform X1
            [Dama dama].
ACCESSION   XP_061010230
VERSION     XP_061010230.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154247.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..190
                     /product="mediator of RNA polymerase II transcription
                     subunit 22 isoform X1"
                     /calculated_mol_wt=22036
     Region          20..171
                     /region_name="Med22"
                     /note="Surfeit locus protein 5 subunit 22 of Mediator
                     complex; pfam06179"
                     /db_xref="CDD:461845"
     CDS             1..190
                     /gene="MED22"
                     /coded_by="XM_061154247.1:120..692"
                     /db_xref="GeneID:133064327"
ORIGIN      
        1 maqqralpqs ketllqsynk rlkddvksim dnfteiikta kiedetqvsr atqgeqdnye
       61 mhvraaniew kpearwhlpw qqftclrrlp gtlpsprspp rpsllatapc ecrgptsrvr
      121 ageslmklvs dlkqflilnd fpsvneaidq rrqqlralqe ecdrklvalr devsidlyel
      181 eeeyyssryk
//
LOCUS       XP_061010231             201 aa            linear   MAM 02-DEC-2023
DEFINITION  mediator of RNA polymerase II transcription subunit 22 isoform X2
            [Dama dama].
ACCESSION   XP_061010231
VERSION     XP_061010231.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154248.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..201
                     /product="mediator of RNA polymerase II transcription
                     subunit 22 isoform X2"
                     /calculated_mol_wt=22308
     Region          20..121
                     /region_name="Med22"
                     /note="Surfeit locus protein 5 subunit 22 of Mediator
                     complex; pfam06179"
                     /db_xref="CDD:461845"
     Region          <94..197
                     /region_name="PRK04654"
                     /note="sec-independent translocase; Provisional"
                     /db_xref="CDD:135173"
     CDS             1..201
                     /gene="MED22"
                     /coded_by="XM_061154248.1:132..737"
                     /db_xref="GeneID:133064327"
ORIGIN      
        1 maqqralpqs ketllqsynk rlkddvksim dnfteiikta kiedetqvsr atqgeqdnye
       61 mhvraanivr ageslmklvs dlkqflilnd fpsvneaidq rrqqlralqe ecdrklvalr
      121 devsidlyel eeeyysssss lceandlplc eaywrldpdt dsadclsapl laspepsagg
      181 plqaaapahs htsgpgpteh t
//
LOCUS       XP_061010233             356 aa            linear   MAM 02-DEC-2023
DEFINITION  surfeit locus protein 6 [Dama dama].
ACCESSION   XP_061010233
VERSION     XP_061010233.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154250.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..356
                     /product="surfeit locus protein 6"
                     /calculated_mol_wt=40753
     Region          <179..313
                     /region_name="SURF6"
                     /note="Surfeit locus protein 6; pfam04935"
                     /db_xref="CDD:461491"
     CDS             1..356
                     /gene="SURF6"
                     /coded_by="XM_061154250.1:251..1321"
                     /db_xref="GeneID:133064328"
ORIGIN      
        1 mtsllakday lqglakkics hpsaepqkrk sagktqvsea aapprkkrkk aqkksrerek
       61 takpkaqgpv eksearkpva aeeeeeeeee aarstrapad glatepdslf aldvlrqrlh
      121 ekieaargqg svkelsaavl ekrrrrkqer drkkrkrrel rakekaaaap eaaeaaepgp
      181 rvpgaetqaq pgllfnkvev teeepaskaq rrkekrqklk gnltpltgrn yrqllerlqa
      241 rqarleelrd rdagqaqele akmrwtnlly kaegvrirdd erllqealkr kerrraqrlr
      301 awekrtahvv gkmqqrqdrr rqnlrrkkaa raerrlekar kkgrilpqdl eragla
//
LOCUS       XP_061010234             382 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: histo-blood group ABO system transferase-like
            [Dama dama].
ACCESSION   XP_061010234
VERSION     XP_061010234.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154251.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..382
                     /product="LOW QUALITY PROTEIN: histo-blood group ABO
                     system transferase-like"
                     /calculated_mol_wt=43994
     Region          94..381
                     /region_name="Glyco_transf_6"
                     /note="Glycosyltransferase family 6; pfam03414"
                     /db_xref="CDD:427285"
     Site            order(149..151,154,212,216,239..241,374,376,380)
                     /site_type="active"
                     /note="substrate binding site [active]"
                     /db_xref="CDD:133008"
     Site            order(149..151,154,239..241,261..264,273,292,328,331)
                     /site_type="active"
                     /db_xref="CDD:133008"
     CDS             1..382
                     /gene="LOC133064330"
                     /coded_by="XM_061154251.1:140..1288"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:133064330"
ORIGIN      
        1 mdpreirgks akswlglill favllgfysn vfsliprrqt eesqsspeah hlqgqrqslp
       61 lssqdengvv lqrmllekke ssegdghpdt cripevprll ypkaqllkps rvdvlvmtpw
      121 fapiiwdgtf dsaildaqfr nttigltvfa ikkyvvflrl fletaekyfm vghrvtyyvf
      181 tdrpadvxqi alqagrqvvv lhvgsyrrwq dvsmhrmemi snfsrqrflr evdylvcldv
      241 dmkfsdhvgv eilaplfgtl hpgfyaadrq sftyerrpls rayiprdegd fyyaggffgg
      301 svpevyrltt achqamtadr argieavwhd eshlnrylls hkpskvlspe ylwdermlqr
      361 ppllrrlryv avpknhaeir nr
//
LOCUS       XP_061010235             431 aa            linear   MAM 02-DEC-2023
DEFINITION  divergent protein kinase domain 1B isoform X1 [Dama dama].
ACCESSION   XP_061010235
VERSION     XP_061010235.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154252.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..431
                     /product="divergent protein kinase domain 1B isoform X1"
                     /calculated_mol_wt=47722
     Region          23..179
                     /region_name="PIP49_N"
                     /note="N-term cysteine-rich ER, FAM69; pfam14875"
                     /db_xref="CDD:464353"
     Region          197..399
                     /region_name="PIP49_C"
                     /note="Protein-kinase domain of FAM69; pfam12260"
                     /db_xref="CDD:463512"
     CDS             1..431
                     /gene="DIPK1B"
                     /coded_by="XM_061154252.1:61..1356"
                     /db_xref="GeneID:133064332"
ORIGIN      
        1 mrrlrrlahl vlfcpfskgl qgrlpglrvk cvflvwlgvl agswlayvhy ssyaelcrgh
       61 vcrvvicdqy rkgiisgsic qdlcsrqqle wrtclssvpg qqvysglwqg revtikcgle
      121 eslslkagad vaprrelvlf dkptrgtsik efremtlsfl kanlgdlpsl palvgqvllm
      181 adfnkdsrvs laeaksvwal lqrnefllll slqgkghasp llghcgdlyv tegvprssgp
      241 aaalpallrp llppalhgal qqwlgpawpw rakiaiglle fveelfhgay gtfymcettl
      301 anvgytakyd frmadlqqva peaavrrflr grhcersadc tygrdcrapc dtllrqckgd
      361 lvqpnlakvc ellrhyllpg apaglraelg rqlrtcatls glasqveahh slvlshlktl
      421 lwkeisntky t
//
LOCUS       XP_061010236             379 aa            linear   MAM 02-DEC-2023
DEFINITION  divergent protein kinase domain 1B isoform X2 [Dama dama].
ACCESSION   XP_061010236
VERSION     XP_061010236.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154253.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..379
                     /product="divergent protein kinase domain 1B isoform X2"
                     /calculated_mol_wt=42060
     Region          23..163
                     /region_name="PIP49_N"
                     /note="N-term cysteine-rich ER, FAM69; pfam14875"
                     /db_xref="CDD:464353"
     Region          155..347
                     /region_name="PIP49_C"
                     /note="Protein-kinase domain of FAM69; pfam12260"
                     /db_xref="CDD:463512"
     CDS             1..379
                     /gene="DIPK1B"
                     /coded_by="XM_061154253.1:61..1200"
                     /db_xref="GeneID:133064332"
ORIGIN      
        1 mrrlrrlahl vlfcpfskgl qgrlpglrvk cvflvwlgvl agswlayvhy ssyaelcrgh
       61 vcrvvicdqy rkgiisgsic qdlcsrqqle wrtclssvpg qqvysglwqg revtikcgle
      121 eslslkagad vaprrelvlf dkptrgtsik efremtlsfl kgkghaspll ghcgdlyvte
      181 gvprssgpaa alpallrpll ppalhgalqq wlgpawpwra kiaigllefv eelfhgaygt
      241 fymcettlan vgytakydfr madlqqvape aavrrflrgr hcersadcty grdcrapcdt
      301 llrqckgdlv qpnlakvcel lrhyllpgap aglraelgrq lrtcatlsgl asqveahhsl
      361 vlshlktllw keisntkyt
//
LOCUS       XP_061010237             300 aa            linear   MAM 02-DEC-2023
DEFINITION  1-acyl-sn-glycerol-3-phosphate acyltransferase beta [Dama dama].
ACCESSION   XP_061010237
VERSION     XP_061010237.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154254.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..300
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase
                     beta"
                     /calculated_mol_wt=33050
     Region          62..253
                     /region_name="PlsC"
                     /note="1-acyl-sn-glycerol-3-phosphate acyltransferase
                     [Lipid transport and metabolism]; COG0204"
                     /db_xref="CDD:439974"
     CDS             1..300
                     /gene="AGPAT2"
                     /coded_by="XM_061154254.1:46..948"
                     /db_xref="GeneID:133064334"
ORIGIN      
        1 melwpwltaa lllllllaql srsarfyaki glycafcftt aalaavvcll rhggrtvenm
       61 siiswfvrsf kyayglrfev kgretldedr pcviisnhqs ildmmglmev lpdrcvqiak
      121 rellflgpvg limylggvlf inrqrsqtam svitdvgerm vreklkvwiy pegtrndngd
      181 llpfkkgafy laiqaqvpii pvvyssfssf yscktklfts gtiqvevlda iptrgltvad
      241 vpklldtchq amrtrffhis kippkngaps gpaaqengap sgpatqenga psgpdaqeaq
//
LOCUS       XP_061010238             478 aa            linear   MAM 02-DEC-2023
DEFINITION  epidermal growth factor-like protein 7 isoform X1 [Dama dama].
ACCESSION   XP_061010238
VERSION     XP_061010238.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154255.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..478
                     /product="epidermal growth factor-like protein 7 isoform
                     X1"
                     /calculated_mol_wt=51279
     Region          166..298
                     /region_name="EMI"
                     /note="EMI domain; pfam07546"
                     /db_xref="CDD:462204"
     Region          315..338
                     /region_name="EGF_2"
                     /note="EGF-like domain; pfam07974"
                     /db_xref="CDD:400365"
     Region          341..370
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF domain; pfam07645"
                     /db_xref="CDD:429571"
     Site            order(341,344,358)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..478
                     /gene="EGFL7"
                     /coded_by="XM_061154255.1:123..1559"
                     /db_xref="GeneID:133064335"
ORIGIN      
        1 mlvvvpvygt drqsqrklgp reggdctrsl lpasstrtgs asshalsfrg pwgdlrwgsr
       61 srgaersldp wlhtataapl qspwlvtrgp lilgqafshs qkllcsppgs hpppgqgcdr
      121 lhrqatsrrr pfhpetramw gsqellplwf lvlaaggteh vyrpgrrvcv vgapqgpvse
      181 sfvqrvyqpf lttcdgyrac styrfrwvsa kpgrpaphss wgqgggsggd pevpspgerp
      241 sgdtsadlvh aggdgscssr ttrgrsqprr tlyrtayrrr pgpaparpry accpgwkrtg
      301 glpgtcgaav cqppcqnggs cvqpgrchcp agwqgdacqt dvdecrtggg gcpqrcvnta
      361 gsywcrcreg hrpsvdgaac lpergaprvt pgpatgadse vkeevqrlqs rvdvleqklq
      421 lvlaplhsla sralehglpd pgsllahslr qldridslse qisfleeqlg scsckkev
//
LOCUS       XP_061010239             477 aa            linear   MAM 02-DEC-2023
DEFINITION  epidermal growth factor-like protein 7 isoform X2 [Dama dama].
ACCESSION   XP_061010239
VERSION     XP_061010239.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154256.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..477
                     /product="epidermal growth factor-like protein 7 isoform
                     X2"
                     /calculated_mol_wt=51208
     Region          166..298
                     /region_name="EMI"
                     /note="EMI domain; pfam07546"
                     /db_xref="CDD:462204"
     Region          314..337
                     /region_name="EGF_2"
                     /note="EGF-like domain; pfam07974"
                     /db_xref="CDD:400365"
     Region          340..369
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF domain; pfam07645"
                     /db_xref="CDD:429571"
     Site            order(340,343,357)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..477
                     /gene="EGFL7"
                     /coded_by="XM_061154256.1:123..1556"
                     /db_xref="GeneID:133064335"
ORIGIN      
        1 mlvvvpvygt drqsqrklgp reggdctrsl lpasstrtgs asshalsfrg pwgdlrwgsr
       61 srgaersldp wlhtataapl qspwlvtrgp lilgqafshs qkllcsppgs hpppgqgcdr
      121 lhrqatsrrr pfhpetramw gsqellplwf lvlaaggteh vyrpgrrvcv vgapqgpvse
      181 sfvqrvyqpf lttcdgyrac styrfrwvsa kpgrpaphss wgqgggsggd pevpspgerp
      241 sgdtsadlvh aggdgscssr ttrgrsqprr tlyrtayrrr pgpaparpry accpgwkrtg
      301 glpgtcgavc qppcqnggsc vqpgrchcpa gwqgdacqtd vdecrtgggg cpqrcvntag
      361 sywcrcregh rpsvdgaacl pergaprvtp gpatgadsev keevqrlqsr vdvleqklql
      421 vlaplhslas ralehglpdp gsllahslrq ldridslseq isfleeqlgs csckkev
//
LOCUS       XP_061010241             446 aa            linear   MAM 02-DEC-2023
DEFINITION  epidermal growth factor-like protein 7 isoform X3 [Dama dama].
ACCESSION   XP_061010241
VERSION     XP_061010241.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154258.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..446
                     /product="epidermal growth factor-like protein 7 isoform
                     X3"
                     /calculated_mol_wt=48037
     Region          166..298
                     /region_name="EMI"
                     /note="EMI domain; pfam07546"
                     /db_xref="CDD:462204"
     Region          309..338
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF domain; pfam07645"
                     /db_xref="CDD:429571"
     Site            order(309,312,326)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..446
                     /gene="EGFL7"
                     /coded_by="XM_061154258.1:123..1463"
                     /db_xref="GeneID:133064335"
ORIGIN      
        1 mlvvvpvygt drqsqrklgp reggdctrsl lpasstrtgs asshalsfrg pwgdlrwgsr
       61 srgaersldp wlhtataapl qspwlvtrgp lilgqafshs qkllcsppgs hpppgqgcdr
      121 lhrqatsrrr pfhpetramw gsqellplwf lvlaaggteh vyrpgrrvcv vgapqgpvse
      181 sfvqrvyqpf lttcdgyrac styrfrwvsa kpgrpaphss wgqgggsggd pevpspgerp
      241 sgdtsadlvh aggdgscssr ttrgrsqprr tlyrtayrrr pgpaparpry accpgwkrtg
      301 glpgtcgadv decrtggggc pqrcvntags ywcrcreghr psvdgaaclp ergaprvtpg
      361 patgadsevk eevqrlqsrv dvleqklqlv laplhslasr alehglpdpg sllahslrql
      421 dridslseqi sfleeqlgsc sckkev
//
LOCUS       XP_061010242             412 aa            linear   MAM 02-DEC-2023
DEFINITION  epidermal growth factor-like protein 7 isoform X4 [Dama dama].
ACCESSION   XP_061010242
VERSION     XP_061010242.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154259.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..412
                     /product="epidermal growth factor-like protein 7 isoform
                     X4"
                     /calculated_mol_wt=44555
     Region          166..232
                     /region_name="EMI"
                     /note="EMI domain; pfam07546"
                     /db_xref="CDD:462204"
     Region          249..272
                     /region_name="EGF_2"
                     /note="EGF-like domain; pfam07974"
                     /db_xref="CDD:400365"
     Region          275..304
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF domain; pfam07645"
                     /db_xref="CDD:429571"
     CDS             1..412
                     /gene="EGFL7"
                     /coded_by="XM_061154259.1:123..1361"
                     /db_xref="GeneID:133064335"
ORIGIN      
        1 mlvvvpvygt drqsqrklgp reggdctrsl lpasstrtgs asshalsfrg pwgdlrwgsr
       61 srgaersldp wlhtataapl qspwlvtrgp lilgqafshs qkllcsppgs hpppgqgcdr
      121 lhrqatsrrr pfhpetramw gsqellplwf lvlaaggteh vyrpgrrvcv vgapqgpvse
      181 sfvqrvyqpf lttcdgyrac styrtlyrta yrrrpgpapa rpryaccpgw krtgglpgtc
      241 gaavcqppcq nggscvqpgr chcpagwqgd acqtdvdecr tggggcpqrc vntagsywcr
      301 creghrpsvd gaaclperga prvtpgpatg adsevkeevq rlqsrvdvle qklqlvlapl
      361 hslasraleh glpdpgslla hslrqldrid slseqisfle eqlgscsckk ev
//
LOCUS       XP_061010243             411 aa            linear   MAM 02-DEC-2023
DEFINITION  epidermal growth factor-like protein 7 isoform X5 [Dama dama].
ACCESSION   XP_061010243
VERSION     XP_061010243.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154260.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..411
                     /product="epidermal growth factor-like protein 7 isoform
                     X5"
                     /calculated_mol_wt=44484
     Region          166..232
                     /region_name="EMI"
                     /note="EMI domain; pfam07546"
                     /db_xref="CDD:462204"
     Region          248..271
                     /region_name="EGF_2"
                     /note="EGF-like domain; pfam07974"
                     /db_xref="CDD:400365"
     Region          274..303
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF domain; pfam07645"
                     /db_xref="CDD:429571"
     CDS             1..411
                     /gene="EGFL7"
                     /coded_by="XM_061154260.1:123..1358"
                     /db_xref="GeneID:133064335"
ORIGIN      
        1 mlvvvpvygt drqsqrklgp reggdctrsl lpasstrtgs asshalsfrg pwgdlrwgsr
       61 srgaersldp wlhtataapl qspwlvtrgp lilgqafshs qkllcsppgs hpppgqgcdr
      121 lhrqatsrrr pfhpetramw gsqellplwf lvlaaggteh vyrpgrrvcv vgapqgpvse
      181 sfvqrvyqpf lttcdgyrac styrtlyrta yrrrpgpapa rpryaccpgw krtgglpgtc
      241 gavcqppcqn ggscvqpgrc hcpagwqgda cqtdvdecrt ggggcpqrcv ntagsywcrc
      301 reghrpsvdg aaclpergap rvtpgpatga dsevkeevqr lqsrvdvleq klqlvlaplh
      361 slasralehg lpdpgsllah slrqldrids lseqisflee qlgscsckke v
//
LOCUS       XP_061010244             340 aa            linear   MAM 02-DEC-2023
DEFINITION  epidermal growth factor-like protein 7 isoform X6 [Dama dama].
ACCESSION   XP_061010244
VERSION     XP_061010244.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154261.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..340
                     /product="epidermal growth factor-like protein 7 isoform
                     X6"
                     /calculated_mol_wt=36232
     Region          28..160
                     /region_name="EMI"
                     /note="EMI domain; pfam07546"
                     /db_xref="CDD:462204"
     Region          177..200
                     /region_name="EGF_2"
                     /note="EGF-like domain; pfam07974"
                     /db_xref="CDD:400365"
     Region          203..232
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF domain; pfam07645"
                     /db_xref="CDD:429571"
     CDS             1..340
                     /gene="EGFL7"
                     /coded_by="XM_061154261.1:131..1153"
                     /db_xref="GeneID:133064335"
ORIGIN      
        1 mwgsqellpl wflvlaaggt ehvyrpgrrv cvvgapqgpv sesfvqrvyq pflttcdgyr
       61 acstyrfrwv sakpgrpaph sswgqgggsg gdpevpspge rpsgdtsadl vhaggdgscs
      121 srttrgrsqp rrtlyrtayr rrpgpaparp ryaccpgwkr tgglpgtcga avcqppcqng
      181 gscvqpgrch cpagwqgdac qtdvdecrtg gggcpqrcvn tagsywcrcr eghrpsvdga
      241 aclpergapr vtpgpatgad sevkeevqrl qsrvdvleqk lqlvlaplhs lasralehgl
      301 pdpgsllahs lrqldridsl seqisfleeq lgscsckkev
//
LOCUS       XP_061010245             340 aa            linear   MAM 02-DEC-2023
DEFINITION  epidermal growth factor-like protein 7 isoform X6 [Dama dama].
ACCESSION   XP_061010245
VERSION     XP_061010245.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154262.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..340
                     /product="epidermal growth factor-like protein 7 isoform
                     X6"
                     /calculated_mol_wt=36232
     Region          28..160
                     /region_name="EMI"
                     /note="EMI domain; pfam07546"
                     /db_xref="CDD:462204"
     Region          177..200
                     /region_name="EGF_2"
                     /note="EGF-like domain; pfam07974"
                     /db_xref="CDD:400365"
     Region          203..232
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF domain; pfam07645"
                     /db_xref="CDD:429571"
     CDS             1..340
                     /gene="EGFL7"
                     /coded_by="XM_061154262.1:176..1198"
                     /db_xref="GeneID:133064335"
ORIGIN      
        1 mwgsqellpl wflvlaaggt ehvyrpgrrv cvvgapqgpv sesfvqrvyq pflttcdgyr
       61 acstyrfrwv sakpgrpaph sswgqgggsg gdpevpspge rpsgdtsadl vhaggdgscs
      121 srttrgrsqp rrtlyrtayr rrpgpaparp ryaccpgwkr tgglpgtcga avcqppcqng
      181 gscvqpgrch cpagwqgdac qtdvdecrtg gggcpqrcvn tagsywcrcr eghrpsvdga
      241 aclpergapr vtpgpatgad sevkeevqrl qsrvdvleqk lqlvlaplhs lasralehgl
      301 pdpgsllahs lrqldridsl seqisfleeq lgscsckkev
//
LOCUS       XP_061010246             340 aa            linear   MAM 02-DEC-2023
DEFINITION  epidermal growth factor-like protein 7 isoform X6 [Dama dama].
ACCESSION   XP_061010246
VERSION     XP_061010246.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154263.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..340
                     /product="epidermal growth factor-like protein 7 isoform
                     X6"
                     /calculated_mol_wt=36232
     Region          28..160
                     /region_name="EMI"
                     /note="EMI domain; pfam07546"
                     /db_xref="CDD:462204"
     Region          177..200
                     /region_name="EGF_2"
                     /note="EGF-like domain; pfam07974"
                     /db_xref="CDD:400365"
     Region          203..232
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF domain; pfam07645"
                     /db_xref="CDD:429571"
     CDS             1..340
                     /gene="EGFL7"
                     /coded_by="XM_061154263.1:65..1087"
                     /db_xref="GeneID:133064335"
ORIGIN      
        1 mwgsqellpl wflvlaaggt ehvyrpgrrv cvvgapqgpv sesfvqrvyq pflttcdgyr
       61 acstyrfrwv sakpgrpaph sswgqgggsg gdpevpspge rpsgdtsadl vhaggdgscs
      121 srttrgrsqp rrtlyrtayr rrpgpaparp ryaccpgwkr tgglpgtcga avcqppcqng
      181 gscvqpgrch cpagwqgdac qtdvdecrtg gggcpqrcvn tagsywcrcr eghrpsvdga
      241 aclpergapr vtpgpatgad sevkeevqrl qsrvdvleqk lqlvlaplhs lasralehgl
      301 pdpgsllahs lrqldridsl seqisfleeq lgscsckkev
//
LOCUS       XP_061010247            2667 aa            linear   MAM 02-DEC-2023
DEFINITION  neurogenic locus notch homolog protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061010247
VERSION     XP_061010247.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154264.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2667
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2667
                     /product="neurogenic locus notch homolog protein 1 isoform
                     X1"
                     /calculated_mol_wt=283871
     Region          274..307
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          310..348
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(310,313,329)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          355..387
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          389..425
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(389,392,406)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          427..464
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(427,430,446)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          467..502
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(467,470,484)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          544..582
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(544,547,563)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          584..620
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(584,587,601)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          622..658
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(622,625,639)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          660..696
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(660,663,677)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          698..733
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(698,701,714)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          735..771
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(735,738,752)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          773..807
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(773,776,789)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          810..845
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(810,813,827)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          849..882
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          887..921
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          923..959
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(923,926,940)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          967..999
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          1001..1037
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(1001,1004,1018)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1039..1075
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(1039,1042,1056)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1077..1113
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(1077,1080,1094)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1120..1151
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          1153..1189
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(1153,1156,1170)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          <1246..1275
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          1278..1312
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          1316..1351
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          1361..1397
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          1399..1437
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(1399,1402,1418)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1574..1611
                     /region_name="NL"
                     /note="Domain found in Notch and Lin-12; smart00004"
                     /db_xref="CDD:197463"
     Region          1619..1654
                     /region_name="Notch"
                     /note="LNR domain; pfam00066"
                     /db_xref="CDD:459658"
     Region          1653..1693
                     /region_name="NL"
                     /note="Domain found in Notch and Lin-12; smart00004"
                     /db_xref="CDD:197463"
     Region          1698..1753
                     /region_name="NOD"
                     /note="NOTCH protein; pfam06816"
                     /db_xref="CDD:462014"
     Region          1791..1847
                     /region_name="NODP"
                     /note="NOTCH protein; pfam07684"
                     /db_xref="CDD:462229"
     Region          1840..1919
                     /region_name="JMTM_Notch1"
                     /note="juxtamembrane and transmembrane (JMTM) domain found
                     in neurogenic locus notch homolog protein 1 (Notch1) and
                     similar proteins; cd21702"
                     /db_xref="CDD:411985"
     Site            order(1841..1843,1846..1848,1859..1860,1862,1864..1881)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:411985"
     Site            order(2000,2002,2006..2007,2010..2012,2027..2028,2032,
                     2035,2045,2047,2049,2053..2054,2057..2059,2061..2062,2066,
                     2069,2078,2080,2082,2086..2087,2090..2092,2094..2095,2099,
                     2102)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          2000..2045
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <2024..2238
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          2047..2078
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          2080..2111
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(2114,2116,2120..2121,2124..2126,2128..2129,2133,
                     2136,2145,2147,2149,2153..2154,2157..2159,2161..2162,2166,
                     2169,2178,2180,2182,2186..2187,2190..2192,2194..2195,2199,
                     2202,2211)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          2114..2145
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          2147..2178
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          2180..2211
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <2240..2629
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..2667
                     /gene="NOTCH1"
                     /coded_by="XM_061154264.1:16..8019"
                     /db_xref="GeneID:133064337"
ORIGIN      
        1 mrvasglies qtgearqgcv srcprrqgpq avttstqgvq gpgpaqlgal agiwhlawvg
       61 agpsgahpgf wkawppghrq arstsaarpc ssplplpgwe savlhgtdhg glcdcgcsst
      121 plsspvntnt rgsrwdiawl hsargpvrsa prprpegspe tspaqdlgdi megrwwlrrc
      181 sgafagqqcq apnpclsapc knggtchtve rdglvdytcs crlgfsgplc ltprdhacla
      241 spclnggtcd lltlaeykcl cppgwsgktc qqadpcasnp canggqclpf easyichcpa
      301 gfhgptcrqd vnecsqspgl chhggtclne vgsyrcvcrp thtgphcelp yvpcspspcq
      361 nggtcrptgd tthecaclpg ftgqnceeni ddcpgnnckn ggacvdgvnt yncrcppewt
      421 gqyctedvde cqlmpnacqn ggtchnthgd yncvcvngwt gedcsenidd casascfqga
      481 tchdrvasfy cecphgrtgl lchlndacis npcnegsncd tnpvngkaic tcpsgytgpa
      541 csqdvdecsl ganpcehagk cintlgsfec qclqgytgpr ceidvnecvs npcqndatcl
      601 dqigefqcic mpgyegvhce vntdecassp clqngrcldk inefvcecpt gftghlcqyd
      661 vdecastpck ngakcldgpn tytcvctegy tgphcevdid ecdpdpchyg sckdgvatft
      721 clcqpgytgh hcetninech sqpcrhggtc qdrdnsylcf clkgttgpnc einlddcasn
      781 pcdsgtcldk idgyecacep gytgsmcnin idecadrpch nggtcedgin gftcrcpegy
      841 hdptclsevn ecssnpcihg acrdslngyk cdcdpgwsga ncdvnndece snpcvnggtc
      901 kdmtsgyvca cregfsgpnc qtninecasn pclnqgtcid dvagykcncl lpytgatcev
      961 vlapcapgpc rnggecrese dyesfscacp agwqgqtcei dinecvkspc ragascqntn
     1021 ggyrchcqag ytgrncetdi ddcrpnpchn ggsctdgint afcdclpgfq gafceedine
     1081 casnpcrnga nctdcvdsyt ctcptgfsgi hcenntpdct esscfnggtc vdginaftcl
     1141 cppgftgsyc qhdvnecdsr pclhggtchd sygtykctcp qgytglncqt lvrwcdsspc
     1201 kndgrcwqtn amyrcechsg wtglycdvps vscevaarqq gvnvthlcrn gglcmnagnt
     1261 hhchcqagyt gsyceeqvde cspspcqnga tctdypggys cecvagyhgv ncseevnecl
     1321 sqpcrnggtc idltntykcs cprgtqgvhc einvddcnpp idpvsrgpkc fnngtcvdqv
     1381 ggysctcppg fvgercegdv neclsnpcda rgtqncvqrv nafhcecrag htgrrcesvi
     1441 ngckdrpckn ggscavasnt argfickcpa gfegatcend arscgslrcl nggtciagpr
     1501 sptclclgpf tgpecqfpas spcvggnpcy nqgvceptae spfyrcrcpa kfngllchil
     1561 dysfgggvgl dipppqieet celpgcreea gnkvcslqcn nhacgwdggd cslnfddpwq
     1621 nctqslqcwk yfsngrcdsq cnsagclfdg fdcqraegqc nplydqyckd hfrdghcdqg
     1681 cnsaecewdg ldcaehvper laagtlvlvv lmppeqlrnr slhflrelsr llhtnvvfkr
     1741 dasgqqmifp yygreeelhk hpirrsvdgg apllpggggg rrrreldpmd irgsivylei
     1801 dnrqcvqsss qcfqsatdva aflgalaslg slnipykiea vqsetveppp ppplhfmyva
     1861 vvafvllffv gcgvllsrkr rrqhgqlwfp egfkvseask kkrreplged svglkplkns
     1921 sdgalmddnq newgdeglea kkfrfeepvv lpdlddqtdh rqwtqqhlda adlrvsamap
     1981 tppqgeadad cldvnvrgpd gftplmiasc sgggletgns eeeedapavi sdfiyqgasl
     2041 hnqtdrtget alhlaarysr sdaakrllea sadaniqdnm grtplhaavs adaqgvfqil
     2101 irnratdlda rmhdgttpli laarlavegm ledlinshad vnavddlgks alhwaaavnn
     2161 veaavvllkn gankdmqnnk eetplflaar egsyetakvl ldhfanrdit dhmdrlprdi
     2221 aqermhhdiv rlldeyslvr spplhgaplg gaptlspplc spngylgnlk ppmqgkkark
     2281 pstkglacgg kepkdlkarr kksqdgkgcl ldsgsvlspv dslesphgyl sdvasppllp
     2341 spfqpspsvp lnhlpgmpea hlgvshlsva akpemaalsg ggrlafeagp prlshlpvas
     2401 ststilgaag sggggavnft vggaaglngq cewlsrlqng lvpnqynplr ggvtpgtlst
     2461 qaaglqhgtv gplhapalsq vmsyqalpst rlasqphlvp tqqlqpqqnl qmqppsmppq
     2521 pnlqpppphl gvgsaasghl grsflggels qadvqplgpg nlaahtvlpq egqalptslp
     2581 salappmtta qfltppsqhs yssspvdntp shqlqvpehp fltpspespd qwssssphsn
     2641 isdwsegiss pptsvpsqia hvpeafk
//
LOCUS       XP_061010248            2536 aa            linear   MAM 02-DEC-2023
DEFINITION  neurogenic locus notch homolog protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061010248
VERSION     XP_061010248.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154265.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2536
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2536
                     /product="neurogenic locus notch homolog protein 1 isoform
                     X2"
                     /calculated_mol_wt=269875
     Region          143..176
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          179..217
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(179,182,198)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          224..256
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          258..294
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(258,261,275)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          296..333
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(296,299,315)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          336..371
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(336,339,353)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          413..451
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(413,416,432)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          453..489
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(453,456,470)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          491..527
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(491,494,508)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          529..565
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(529,532,546)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          567..602
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(567,570,583)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          604..640
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(604,607,621)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          642..676
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(642,645,658)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          679..714
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(679,682,696)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          718..751
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          756..790
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          792..828
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(792,795,809)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          870..906
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(870,873,887)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          908..944
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(908,911,925)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          946..982
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(946,949,963)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          989..1020
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          1022..1058
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(1022,1025,1039)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          <1115..1144
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          1147..1181
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          1185..1220
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          1230..1266
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          1268..1306
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(1268,1271,1287)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1443..1480
                     /region_name="NL"
                     /note="Domain found in Notch and Lin-12; smart00004"
                     /db_xref="CDD:197463"
     Region          1488..1523
                     /region_name="Notch"
                     /note="LNR domain; pfam00066"
                     /db_xref="CDD:459658"
     Region          1526..1562
                     /region_name="Notch"
                     /note="LNR domain; pfam00066"
                     /db_xref="CDD:459658"
     Region          1567..1622
                     /region_name="NOD"
                     /note="NOTCH protein; pfam06816"
                     /db_xref="CDD:462014"
     Region          1660..1716
                     /region_name="NODP"
                     /note="NOTCH protein; pfam07684"
                     /db_xref="CDD:462229"
     Region          1709..1788
                     /region_name="JMTM_Notch1"
                     /note="juxtamembrane and transmembrane (JMTM) domain found
                     in neurogenic locus notch homolog protein 1 (Notch1) and
                     similar proteins; cd21702"
                     /db_xref="CDD:411985"
     Site            order(1710..1712,1715..1717,1728..1729,1731,1733..1750)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:411985"
     Site            order(1869,1871,1875..1876,1879..1881,1896..1897,1901,
                     1904,1914,1916,1918,1922..1923,1926..1928,1930..1931,1935,
                     1938,1947,1949,1951,1955..1956,1959..1961,1963..1964,1968,
                     1971)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          1869..1914
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <1893..2107
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          1916..1947
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1949..1980
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(1983,1985,1989..1990,1993..1995,1997..1998,2002,
                     2005,2014,2016,2018,2022..2023,2026..2028,2030..2031,2035,
                     2038,2047,2049,2051,2055..2056,2059..2061,2063..2064,2068,
                     2071,2080)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          1983..2014
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          2016..2047
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          2049..2080
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <2109..2498
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..2536
                     /gene="NOTCH1"
                     /coded_by="XM_061154265.1:36..7646"
                     /db_xref="GeneID:133064337"
ORIGIN      
        1 mppllapllc lallpalaar glrcsqpget clnggkcevf pngteacics gafagqqcqa
       61 pnpclsapck nggtchtver dglvdytcsc rlgfsgplcl tprdhaclas pclnggtcdl
      121 ltlaeykclc ppgwsgktcq qadpcasnpc anggqclpfe asyichcpag fhgptcrqdv
      181 necsqspglc hhggtclnev gsyrcvcrpt htgphcelpy vpcspspcqn ggtcrptgdt
      241 thecaclpgf tgqnceenid dcpgnnckng gacvdgvnty ncrcppewtg qyctedvdec
      301 qlmpnacqng gtchnthgdy ncvcvngwtg edcseniddc asascfqgat chdrvasfyc
      361 ecphgrtgll chlndacisn pcnegsncdt npvngkaict cpsgytgpac sqdvdecslg
      421 anpcehagkc intlgsfecq clqgytgprc eidvnecvsn pcqndatcld qigefqcicm
      481 pgyegvhcev ntdecasspc lqngrcldki nefvcecptg ftghlcqydv decastpckn
      541 gakcldgpnt ytcvctegyt gphcevdide cdpdpchygs ckdgvatftc lcqpgytghh
      601 cetninechs qpcrhggtcq drdnsylcfc lkgttgpnce inlddcasnp cdsgtcldki
      661 dgyecacepg ytgsmcnini decadrpchn ggtcedging ftcrcpegyh dptclsevne
      721 cssnpcihga crdslngykc dcdpgwsgan cdvnndeces npcvnggtck dmtsgyvcac
      781 regfsgpncq tninecasnp clnqgtcidd vagykcncll pytgatcevv lapcapgpcr
      841 nggecresed yesfscacpa gwqgqtceid inecvkspcr agascqntng gyrchcqagy
      901 tgrncetdid dcrpnpchng gsctdginta fcdclpgfqg afceedinec asnpcrngan
      961 ctdcvdsytc tcptgfsgih cenntpdcte sscfnggtcv dginaftclc ppgftgsycq
     1021 hdvnecdsrp clhggtchds ygtykctcpq gytglncqtl vrwcdsspck ndgrcwqtna
     1081 myrcechsgw tglycdvpsv scevaarqqg vnvthlcrng glcmnagnth hchcqagytg
     1141 syceeqvdec spspcqngat ctdypggysc ecvagyhgvn cseevnecls qpcrnggtci
     1201 dltntykcsc prgtqgvhce invddcnppi dpvsrgpkcf nngtcvdqvg gysctcppgf
     1261 vgercegdvn eclsnpcdar gtqncvqrvn afhcecragh tgrrcesvin gckdrpckng
     1321 gscavasnta rgfickcpag fegatcenda rscgslrcln ggtciagprs ptclclgpft
     1381 gpecqfpass pcvggnpcyn qgvceptaes pfyrcrcpak fngllchild ysfgggvgld
     1441 ipppqieetc elpgcreeag nkvcslqcnn hacgwdggdc slnfddpwqn ctqslqcwky
     1501 fsngrcdsqc nsagclfdgf dcqraegqcn plydqyckdh frdghcdqgc nsaecewdgl
     1561 dcaehvperl aagtlvlvvl mppeqlrnrs lhflrelsrl lhtnvvfkrd asgqqmifpy
     1621 ygreeelhkh pirrsvdgga pllpgggggr rrreldpmdi rgsivyleid nrqcvqsssq
     1681 cfqsatdvaa flgalaslgs lnipykieav qsetvepppp pplhfmyvav vafvllffvg
     1741 cgvllsrkrr rqhgqlwfpe gfkvseaskk krreplgeds vglkplknss dgalmddnqn
     1801 ewgdegleak kfrfeepvvl pdlddqtdhr qwtqqhldaa dlrvsamapt ppqgeadadc
     1861 ldvnvrgpdg ftplmiascs gggletgnse eeedapavis dfiyqgaslh nqtdrtgeta
     1921 lhlaarysrs daakrlleas adaniqdnmg rtplhaavsa daqgvfqili rnratdldar
     1981 mhdgttplil aarlavegml edlinshadv navddlgksa lhwaaavnnv eaavvllkng
     2041 ankdmqnnke etplflaare gsyetakvll dhfanrditd hmdrlprdia qermhhdivr
     2101 lldeyslvrs pplhgaplgg aptlspplcs pngylgnlkp pmqgkkarkp stkglacggk
     2161 epkdlkarrk ksqdgkgcll dsgsvlspvd slesphgyls dvasppllps pfqpspsvpl
     2221 nhlpgmpeah lgvshlsvaa kpemaalsgg grlafeagpp rlshlpvass tstilgaags
     2281 ggggavnftv ggaaglngqc ewlsrlqngl vpnqynplrg gvtpgtlstq aaglqhgtvg
     2341 plhapalsqv msyqalpstr lasqphlvpt qqlqpqqnlq mqppsmppqp nlqpppphlg
     2401 vgsaasghlg rsflggelsq advqplgpgn laahtvlpqe gqalptslps alappmttaq
     2461 fltppsqhsy ssspvdntps hqlqvpehpf ltpspespdq wssssphsni sdwsegissp
     2521 ptsvpsqiah vpeafk
//
LOCUS       XP_061010250            2405 aa            linear   MAM 02-DEC-2023
DEFINITION  protein transport protein Sec16A isoform X1 [Dama dama].
ACCESSION   XP_061010250
VERSION     XP_061010250.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154267.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2405
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2405
                     /product="protein transport protein Sec16A isoform X1"
                     /calculated_mol_wt=255464
     Region          <3..283
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <652..1149
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1490..1850
                     /region_name="ACE1-Sec16-like"
                     /note="Ancestral coatomer element 1 (ACE1) of COPII coat
                     complex assembly protein Sec16; cd09233"
                     /db_xref="CDD:187750"
     Site            order(1607..1608,1610..1611,1613..1617,1619,1621,1631,
                     1633,1635..1636,1638..1639,1643,1649,1656,1665,1670,1673,
                     1701..1702)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:187750"
     Site            order(1773,1795..1796,1798..1799,1802..1803,1806,
                     1833..1834,1837..1838,1841,1845)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:187750"
     CDS             1..2405
                     /gene="SEC16A"
                     /coded_by="XM_061154267.1:257..7474"
                     /db_xref="GeneID:133064338"
ORIGIN      
        1 mqpppqavps gvvgpppsgs pqtmfwsnsp yrrqagshtp mapitcplqp vtdpfafsrq
       61 alqntslggs skssppilqg papppslpra glpvphtsag dssqgpcepl pgpplqprad
      121 tspfpgvpap saphgpemnr saetpgpepe llnapfppqy ipgvgssgsr ggllqghvpr
      181 pdiplsrpsp pdstvppaai plppqphqqv pgqwgpgqgg prppgqhywp gpegapqipg
      241 phassvthfp ppsslhqrpg heqlgppasl pgpsasdgrn eavylpsedh svnsfdpesa
      301 frqnsragnr ranqelrssp gvnreqlsgl apvnpltqen speshsrhpl gagggwappe
      361 vgsgalamff kggeteneen lssetagsag qavvdgfclg qlpahvgvgg ayqafprgss
      421 sesaqlggep qrcfprsags phekaaskaa amhlwadtar agsqyenven lefvqnqevl
      481 pseplsmdps spgdplkcgp lpgpagprlg avgpaagggp nlealdvtah sarsdsasss
      541 yssksqrglp gaarphdsgt fiqqevgkpe eespgrffkq idsspvgget deitsqnyhg
      601 slsqpstpsp pkptgifqts anssfepvks hlvgvkpvea dranvvgevr gpsapqkqhr
      661 vaaampdaap gnleqppdnm etlsppqlca lplatpteag qgllqaagpp letalptpek
      721 rsstrlqgpv kcespattlw aqnelpdfgg nvllapaapa lhvpakpqls eviqppdegm
      781 arqvglgvqs gdglgasenl enppqlgeee alppqagpgy asllssppte slqnqpvlia
      841 qpdqsynlaq pvnvsvslpn pnektpswrd ssvgdkpavs swaaggdpge nvplsgmpag
      901 sllcsplpnh laqspfpqvs giydmvsnqa anllvqphsh pkaslpegqk vysadsvppe
      961 glpspaggag lmlvppasst svpdsskpgv cggrdvasga ldftfgrtle npagmyspah
     1021 adglasgqqt tashrppgpg antpdrfyqq vmkeaqdqph aeraqqelap plpapqgpra
     1081 alpepsnpgs ppvqaqppdp arpsspalad vgqqllsrpp qsssasvvst sssqaaprpd
     1141 qqwlqppppd lasyyyyrsl ydgwqppyps pyppdpgpap hyyqdmysly dpryrpcdsa
     1201 ayvdpyrype perpssrash csdrpaarqa ypegyynsks gwssqsdyya syyssqydyg
     1261 dpgrwdrfyy gsrfrdpray drrywydaey dscrkenyay gdrpekyddr yrydprftgs
     1321 fddepepprd pygeeadrhs ehsqhsarsl rsapslqsrr ssfsahshqs qvyrshntpa
     1381 gsyevppapg sfhgdyaygp ygsdfhgvpg fpeygyptea swpsveqaps rpsspekfsv
     1441 phvcarfgpg gqlikvipnl psegqpalve ihsmetllqh tpeqeemraf pgplgkddth
     1501 kvdvinfaqn katkclqnen lidkesasll wsfivllcrq ngtvvgtdia elllrdhrtv
     1561 wlpgkspnea nlidftneav eqveeeesge aqlsfltdsq aastlekdte rfrelllygr
     1621 kkdalesamk nglwghalll askmdsrtha rvmtrfansl pindplqtvy qlmsgrmpaa
     1681 stccgdekwg dwrphlamil snlssnvdve sramatmgdt laskglldaa hfcylmaqvg
     1741 fgvytkkttk lvligsnhsl pflkfatnea iqrteayefa qslgaqtcsl psfqvfkfiy
     1801 ccrlaemgla tqafhyceai aksvlaephr hspvllrqla qvasqlrlsd pqlkekpeee
     1861 asaepawlaq lqlverqiee gavawsqdga cpprcsssps pevgprdgpg ptqllslgad
     1921 npllappaps aelfsqdvrl lpsapltlpd gppatptrvp mlpvplpgpa elgpvhgppg
     1981 pvpgfaepsg pdpvalypgp gvptlqdtdr llpearsqda gaapqempgr sshsepgeee
     2041 fggnfanmgs frtspgpeap pqalqppapl mpapevqrpv qaakkeskep kksseswfsr
     2101 wlpvkkrtea ylpddknksi vwdekknrwv dvnepeeekk apppppaall kaphaahpgp
     2161 ggpprptvnm ysrkaagtra ryvdilnpgg pqrsesalap tdlfaplapl pipahllgpn
     2221 adaeevpsak gagregparp epasdpkvfg pavaslpgpe lpasgldgpq ggelsrcssl
     2281 sslsrevsqh fdqapgapap agappgaavp fynpaqlaqh pwgqradlsp vpvvsgpchl
     2341 rklkdgedwp eevpvikler pcpgaapgre vavcqglrpm acdsslspdg cersdsevty
     2401 gafqh
//
LOCUS       XP_061010251            2405 aa            linear   MAM 02-DEC-2023
DEFINITION  protein transport protein Sec16A isoform X1 [Dama dama].
ACCESSION   XP_061010251
VERSION     XP_061010251.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154268.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2405
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2405
                     /product="protein transport protein Sec16A isoform X1"
                     /calculated_mol_wt=255464
     Region          <3..283
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <652..1149
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1490..1850
                     /region_name="ACE1-Sec16-like"
                     /note="Ancestral coatomer element 1 (ACE1) of COPII coat
                     complex assembly protein Sec16; cd09233"
                     /db_xref="CDD:187750"
     Site            order(1607..1608,1610..1611,1613..1617,1619,1621,1631,
                     1633,1635..1636,1638..1639,1643,1649,1656,1665,1670,1673,
                     1701..1702)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:187750"
     Site            order(1773,1795..1796,1798..1799,1802..1803,1806,
                     1833..1834,1837..1838,1841,1845)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:187750"
     CDS             1..2405
                     /gene="SEC16A"
                     /coded_by="XM_061154268.1:305..7522"
                     /db_xref="GeneID:133064338"
ORIGIN      
        1 mqpppqavps gvvgpppsgs pqtmfwsnsp yrrqagshtp mapitcplqp vtdpfafsrq
       61 alqntslggs skssppilqg papppslpra glpvphtsag dssqgpcepl pgpplqprad
      121 tspfpgvpap saphgpemnr saetpgpepe llnapfppqy ipgvgssgsr ggllqghvpr
      181 pdiplsrpsp pdstvppaai plppqphqqv pgqwgpgqgg prppgqhywp gpegapqipg
      241 phassvthfp ppsslhqrpg heqlgppasl pgpsasdgrn eavylpsedh svnsfdpesa
      301 frqnsragnr ranqelrssp gvnreqlsgl apvnpltqen speshsrhpl gagggwappe
      361 vgsgalamff kggeteneen lssetagsag qavvdgfclg qlpahvgvgg ayqafprgss
      421 sesaqlggep qrcfprsags phekaaskaa amhlwadtar agsqyenven lefvqnqevl
      481 pseplsmdps spgdplkcgp lpgpagprlg avgpaagggp nlealdvtah sarsdsasss
      541 yssksqrglp gaarphdsgt fiqqevgkpe eespgrffkq idsspvgget deitsqnyhg
      601 slsqpstpsp pkptgifqts anssfepvks hlvgvkpvea dranvvgevr gpsapqkqhr
      661 vaaampdaap gnleqppdnm etlsppqlca lplatpteag qgllqaagpp letalptpek
      721 rsstrlqgpv kcespattlw aqnelpdfgg nvllapaapa lhvpakpqls eviqppdegm
      781 arqvglgvqs gdglgasenl enppqlgeee alppqagpgy asllssppte slqnqpvlia
      841 qpdqsynlaq pvnvsvslpn pnektpswrd ssvgdkpavs swaaggdpge nvplsgmpag
      901 sllcsplpnh laqspfpqvs giydmvsnqa anllvqphsh pkaslpegqk vysadsvppe
      961 glpspaggag lmlvppasst svpdsskpgv cggrdvasga ldftfgrtle npagmyspah
     1021 adglasgqqt tashrppgpg antpdrfyqq vmkeaqdqph aeraqqelap plpapqgpra
     1081 alpepsnpgs ppvqaqppdp arpsspalad vgqqllsrpp qsssasvvst sssqaaprpd
     1141 qqwlqppppd lasyyyyrsl ydgwqppyps pyppdpgpap hyyqdmysly dpryrpcdsa
     1201 ayvdpyrype perpssrash csdrpaarqa ypegyynsks gwssqsdyya syyssqydyg
     1261 dpgrwdrfyy gsrfrdpray drrywydaey dscrkenyay gdrpekyddr yrydprftgs
     1321 fddepepprd pygeeadrhs ehsqhsarsl rsapslqsrr ssfsahshqs qvyrshntpa
     1381 gsyevppapg sfhgdyaygp ygsdfhgvpg fpeygyptea swpsveqaps rpsspekfsv
     1441 phvcarfgpg gqlikvipnl psegqpalve ihsmetllqh tpeqeemraf pgplgkddth
     1501 kvdvinfaqn katkclqnen lidkesasll wsfivllcrq ngtvvgtdia elllrdhrtv
     1561 wlpgkspnea nlidftneav eqveeeesge aqlsfltdsq aastlekdte rfrelllygr
     1621 kkdalesamk nglwghalll askmdsrtha rvmtrfansl pindplqtvy qlmsgrmpaa
     1681 stccgdekwg dwrphlamil snlssnvdve sramatmgdt laskglldaa hfcylmaqvg
     1741 fgvytkkttk lvligsnhsl pflkfatnea iqrteayefa qslgaqtcsl psfqvfkfiy
     1801 ccrlaemgla tqafhyceai aksvlaephr hspvllrqla qvasqlrlsd pqlkekpeee
     1861 asaepawlaq lqlverqiee gavawsqdga cpprcsssps pevgprdgpg ptqllslgad
     1921 npllappaps aelfsqdvrl lpsapltlpd gppatptrvp mlpvplpgpa elgpvhgppg
     1981 pvpgfaepsg pdpvalypgp gvptlqdtdr llpearsqda gaapqempgr sshsepgeee
     2041 fggnfanmgs frtspgpeap pqalqppapl mpapevqrpv qaakkeskep kksseswfsr
     2101 wlpvkkrtea ylpddknksi vwdekknrwv dvnepeeekk apppppaall kaphaahpgp
     2161 ggpprptvnm ysrkaagtra ryvdilnpgg pqrsesalap tdlfaplapl pipahllgpn
     2221 adaeevpsak gagregparp epasdpkvfg pavaslpgpe lpasgldgpq ggelsrcssl
     2281 sslsrevsqh fdqapgapap agappgaavp fynpaqlaqh pwgqradlsp vpvvsgpchl
     2341 rklkdgedwp eevpvikler pcpgaapgre vavcqglrpm acdsslspdg cersdsevty
     2401 gafqh
//
LOCUS       XP_061010252            2385 aa            linear   MAM 02-DEC-2023
DEFINITION  protein transport protein Sec16A isoform X2 [Dama dama].
ACCESSION   XP_061010252
VERSION     XP_061010252.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154269.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2385
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2385
                     /product="protein transport protein Sec16A isoform X2"
                     /calculated_mol_wt=253216
     Region          <3..283
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <652..1149
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1490..1850
                     /region_name="ACE1-Sec16-like"
                     /note="Ancestral coatomer element 1 (ACE1) of COPII coat
                     complex assembly protein Sec16; cd09233"
                     /db_xref="CDD:187750"
     Site            order(1607..1608,1610..1611,1613..1617,1619,1621,1631,
                     1633,1635..1636,1638..1639,1643,1649,1656,1665,1670,1673,
                     1701..1702)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:187750"
     Site            order(1773,1795..1796,1798..1799,1802..1803,1806,
                     1833..1834,1837..1838,1841,1845)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:187750"
     CDS             1..2385
                     /gene="SEC16A"
                     /coded_by="XM_061154269.1:257..7414"
                     /db_xref="GeneID:133064338"
ORIGIN      
        1 mqpppqavps gvvgpppsgs pqtmfwsnsp yrrqagshtp mapitcplqp vtdpfafsrq
       61 alqntslggs skssppilqg papppslpra glpvphtsag dssqgpcepl pgpplqprad
      121 tspfpgvpap saphgpemnr saetpgpepe llnapfppqy ipgvgssgsr ggllqghvpr
      181 pdiplsrpsp pdstvppaai plppqphqqv pgqwgpgqgg prppgqhywp gpegapqipg
      241 phassvthfp ppsslhqrpg heqlgppasl pgpsasdgrn eavylpsedh svnsfdpesa
      301 frqnsragnr ranqelrssp gvnreqlsgl apvnpltqen speshsrhpl gagggwappe
      361 vgsgalamff kggeteneen lssetagsag qavvdgfclg qlpahvgvgg ayqafprgss
      421 sesaqlggep qrcfprsags phekaaskaa amhlwadtar agsqyenven lefvqnqevl
      481 pseplsmdps spgdplkcgp lpgpagprlg avgpaagggp nlealdvtah sarsdsasss
      541 yssksqrglp gaarphdsgt fiqqevgkpe eespgrffkq idsspvgget deitsqnyhg
      601 slsqpstpsp pkptgifqts anssfepvks hlvgvkpvea dranvvgevr gpsapqkqhr
      661 vaaampdaap gnleqppdnm etlsppqlca lplatpteag qgllqaagpp letalptpek
      721 rsstrlqgpv kcespattlw aqnelpdfgg nvllapaapa lhvpakpqls eviqppdegm
      781 arqvglgvqs gdglgasenl enppqlgeee alppqagpgy asllssppte slqnqpvlia
      841 qpdqsynlaq pvnvsvslpn pnektpswrd ssvgdkpavs swaaggdpge nvplsgmpag
      901 sllcsplpnh laqspfpqvs giydmvsnqa anllvqphsh pkaslpegqk vysadsvppe
      961 glpspaggag lmlvppasst svpdsskpgv cggrdvasga ldftfgrtle npagmyspah
     1021 adglasgqqt tashrppgpg antpdrfyqq vmkeaqdqph aeraqqelap plpapqgpra
     1081 alpepsnpgs ppvqaqppdp arpsspalad vgqqllsrpp qsssasvvst sssqaaprpd
     1141 qqwlqppppd lasyyyyrsl ydgwqppyps pyppdpgpap hyyqdmysly dpryrpcdsa
     1201 ayvdpyrype perpssrash csdrpaarqa ypegyynsks gwssqsdyya syyssqydyg
     1261 dpgrwdrfyy gsrfrdpray drrywydaey dscrkenyay gdrpekyddr yrydprftgs
     1321 fddepepprd pygeeadrhs ehsqhsarsl rsapslqsrr ssfsahshqs qvyrshntpa
     1381 gsyevppapg sfhgdyaygp ygsdfhgvpg fpeygyptea swpsveqaps rpsspekfsv
     1441 phvcarfgpg gqlikvipnl psegqpalve ihsmetllqh tpeqeemraf pgplgkddth
     1501 kvdvinfaqn katkclqnen lidkesasll wsfivllcrq ngtvvgtdia elllrdhrtv
     1561 wlpgkspnea nlidftneav eqveeeesge aqlsfltdsq aastlekdte rfrelllygr
     1621 kkdalesamk nglwghalll askmdsrtha rvmtrfansl pindplqtvy qlmsgrmpaa
     1681 stccgdekwg dwrphlamil snlssnvdve sramatmgdt laskglldaa hfcylmaqvg
     1741 fgvytkkttk lvligsnhsl pflkfatnea iqrteayefa qslgaqtcsl psfqvfkfiy
     1801 ccrlaemgla tqafhyceai aksvlaephr hspvllrqla qvasqlrlsd pqlkekpeee
     1861 asaepawlaq lqlverqiee gavawsqdga cpprcsssps pevgprdgpg ptqllslgad
     1921 npllappaps aelfsqdvrl lpsapltlpd gppatptrvp mlpvplpgpa elgpvhgppg
     1981 pvpgfaepsg pdpvalypgp gvptlqdtdr llpearsqda gaapqempgr sshsepgeee
     2041 fggnfanmgs frtspgpeap pqalqppapl mpapevqrpv qaakkeskep kksseswfsr
     2101 wlpvkkrtea ylpddknksi vwdekknrwv dvnepeeekk apppppaall kaphaahpgp
     2161 ggpprptvnm ysrkaagtra ryvdilnpgg pqrsesalap tdlfaplapl pipahllgpn
     2221 adaeevpsak gagregparp epasdpkvfg pavaslpgpe lpasgldgpq ggeapgapap
     2281 agappgaavp fynpaqlaqh pwgqradlsp vpvvsgpchl rklkdgedwp eevpvikler
     2341 pcpgaapgre vavcqglrpm acdsslspdg cersdsevty gafqh
//
LOCUS       XP_061010253            2366 aa            linear   MAM 02-DEC-2023
DEFINITION  protein transport protein Sec16A isoform X3 [Dama dama].
ACCESSION   XP_061010253
VERSION     XP_061010253.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154270.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2366
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2366
                     /product="protein transport protein Sec16A isoform X3"
                     /calculated_mol_wt=251611
     Region          <3..283
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <651..1110
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1451..1811
                     /region_name="ACE1-Sec16-like"
                     /note="Ancestral coatomer element 1 (ACE1) of COPII coat
                     complex assembly protein Sec16; cd09233"
                     /db_xref="CDD:187750"
     Site            order(1568..1569,1571..1572,1574..1578,1580,1582,1592,
                     1594,1596..1597,1599..1600,1604,1610,1617,1626,1631,1634,
                     1662..1663)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:187750"
     Site            order(1734,1756..1757,1759..1760,1763..1764,1767,
                     1794..1795,1798..1799,1802,1806)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:187750"
     CDS             1..2366
                     /gene="SEC16A"
                     /coded_by="XM_061154270.1:257..7357"
                     /db_xref="GeneID:133064338"
ORIGIN      
        1 mqpppqavps gvvgpppsgs pqtmfwsnsp yrrqagshtp mapitcplqp vtdpfafsrq
       61 alqntslggs skssppilqg papppslpra glpvphtsag dssqgpcepl pgpplqprad
      121 tspfpgvpap saphgpemnr saetpgpepe llnapfppqy ipgvgssgsr ggllqghvpr
      181 pdiplsrpsp pdstvppaai plppqphqqv pgqwgpgqgg prppgqhywp gpegapqipg
      241 phassvthfp ppsslhqrpg heqlgppasl pgpsasdgrn eavylpsedh svnsfdpesa
      301 frqnsragnr ranqelrssp gvnreqlsgl apvnpltqen speshsrhpl gagggwappe
      361 vgsgalamff kggeteneen lssetagsag qavvdgfclg qlpahvgvgg ayqafprgss
      421 sesaqlggep qrcfprsags phekaaskaa amhlwadtar agsqyenven lefvqnqevl
      481 pseplsmdps spgdplkcgp lpgpagprlg avgpaagggp nlealdvtah sarsdsasss
      541 yssksqrglp gaarphdsgt fiqqevgkpe eespgrffkq idsspvgget deitsqnyhg
      601 slsqpstpsp pkptgifqts anssfepvks hlvgvkpvea dranvvgevr gpsapqkqhr
      661 vaaampdaap gnleqppdnm etlsppqlca lplatpteag qgllqaagpp letalptpek
      721 rsstrlqgpv kcespattlw aqnelpdfgg nvllapaapa lhvpakpqls eviqppdegm
      781 arqvglgvqs gdglgasenl enppqlgeee alppqagpgy asllssppte slqnqpvlia
      841 qpdqsynlaq pvnvsvslpn pnektpswrd ssvgdkpavs swaaggdpge nvplsgmpag
      901 sllcsplpnh laqspfpqvs giydmvsnqa anllvqphsh pkaslpegqk vysadsvppe
      961 glpspaggag lmlvppasst svpdsskpgv cggrdvasga ldftfdrfyq qvmkeaqdqp
     1021 haeraqqela pplpapqgpr aalpepsnpg sppvqaqppd parpsspala dvgqqllsrp
     1081 pqsssasvvs tsssqaaprp dqqwlqpppp dlasyyyyrs lydgwqppyp spyppdpgpa
     1141 phyyqdmysl ydpryrpcds aayvdpyryp eperpssras hcsdrpaarq aypegyynsk
     1201 sgwssqsdyy asyyssqydy gdpgrwdrfy ygsrfrdpra ydrrywydae ydscrkenya
     1261 ygdrpekydd ryrydprftg sfddepeppr dpygeeadrh sehsqhsars lrsapslqsr
     1321 rssfsahshq sqvyrshntp agsyevppap gsfhgdyayg pygsdfhgvp gfpeygypte
     1381 aswpsveqap srpsspekfs vphvcarfgp ggqlikvipn lpsegqpalv eihsmetllq
     1441 htpeqeemra fpgplgkddt hkvdvinfaq nkatkclqne nlidkesasl lwsfivllcr
     1501 qngtvvgtdi aelllrdhrt vwlpgkspne anlidftnea veqveeeesg eaqlsfltds
     1561 qaastlekdt erfrelllyg rkkdalesam knglwghall laskmdsrth arvmtrfans
     1621 lpindplqtv yqlmsgrmpa astccgdekw gdwrphlami lsnlssnvdv esramatmgd
     1681 tlaskgllda ahfcylmaqv gfgvytkktt klvligsnhs lpflkfatne aiqrteayef
     1741 aqslgaqtcs lpsfqvfkfi yccrlaemgl atqafhycea iaksvlaeph rhspvllrql
     1801 aqvasqlrls dpqlkekpee easaepawla qlqlverqie egavawsqdg acpprcsssp
     1861 spevgprdgp gptqllslga dnpllappap saelfsqdvr llpsapltlp dgppatptrv
     1921 pmlpvplpgp aelgpvhgpp gpvpgfaeps gpdpvalypg pgvptlqdtd rllpearsqd
     1981 agaapqempg rsshsepgee efggnfanmg sfrtspgpea ppqalqppap lmpapevqrp
     2041 vqaakkeske pkksseswfs rwlpvkkrte aylpddknks ivwdekknrw vdvnepeeek
     2101 kapppppaal lkaphaahpg pggpprptvn mysrkaagtr aryvdilnpg gpqrsesala
     2161 ptdlfaplap lpipahllgp nadaeevpsa kgagregpar pepasdpkvf gpavaslpgp
     2221 elpasgldgp qggelsrcss lsslsrevsq hfdqapgapa pagappgaav pfynpaqlaq
     2281 hpwgqradls pvpvvsgpch lrklkdgedw peevpvikle rpcpgaapgr evavcqglrp
     2341 macdsslspd gcersdsevt ygafqh
//
LOCUS       XP_061010254            2341 aa            linear   MAM 02-DEC-2023
DEFINITION  protein transport protein Sec16A isoform X4 [Dama dama].
ACCESSION   XP_061010254
VERSION     XP_061010254.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154271.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2341
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2341
                     /product="protein transport protein Sec16A isoform X4"
                     /calculated_mol_wt=248435
     Region          <3..283
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <652..1149
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1490..1850
                     /region_name="ACE1-Sec16-like"
                     /note="Ancestral coatomer element 1 (ACE1) of COPII coat
                     complex assembly protein Sec16; cd09233"
                     /db_xref="CDD:187750"
     Site            order(1607..1608,1610..1611,1613..1617,1619,1621,1631,
                     1633,1635..1636,1638..1639,1643,1649,1656,1665,1670,1673,
                     1701..1702)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:187750"
     Site            order(1773,1795..1796,1798..1799,1802..1803,1806,
                     1833..1834,1837..1838,1841,1845)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:187750"
     CDS             1..2341
                     /gene="SEC16A"
                     /coded_by="XM_061154271.1:257..7282"
                     /db_xref="GeneID:133064338"
ORIGIN      
        1 mqpppqavps gvvgpppsgs pqtmfwsnsp yrrqagshtp mapitcplqp vtdpfafsrq
       61 alqntslggs skssppilqg papppslpra glpvphtsag dssqgpcepl pgpplqprad
      121 tspfpgvpap saphgpemnr saetpgpepe llnapfppqy ipgvgssgsr ggllqghvpr
      181 pdiplsrpsp pdstvppaai plppqphqqv pgqwgpgqgg prppgqhywp gpegapqipg
      241 phassvthfp ppsslhqrpg heqlgppasl pgpsasdgrn eavylpsedh svnsfdpesa
      301 frqnsragnr ranqelrssp gvnreqlsgl apvnpltqen speshsrhpl gagggwappe
      361 vgsgalamff kggeteneen lssetagsag qavvdgfclg qlpahvgvgg ayqafprgss
      421 sesaqlggep qrcfprsags phekaaskaa amhlwadtar agsqyenven lefvqnqevl
      481 pseplsmdps spgdplkcgp lpgpagprlg avgpaagggp nlealdvtah sarsdsasss
      541 yssksqrglp gaarphdsgt fiqqevgkpe eespgrffkq idsspvgget deitsqnyhg
      601 slsqpstpsp pkptgifqts anssfepvks hlvgvkpvea dranvvgevr gpsapqkqhr
      661 vaaampdaap gnleqppdnm etlsppqlca lplatpteag qgllqaagpp letalptpek
      721 rsstrlqgpv kcespattlw aqnelpdfgg nvllapaapa lhvpakpqls eviqppdegm
      781 arqvglgvqs gdglgasenl enppqlgeee alppqagpgy asllssppte slqnqpvlia
      841 qpdqsynlaq pvnvsvslpn pnektpswrd ssvgdkpavs swaaggdpge nvplsgmpag
      901 sllcsplpnh laqspfpqvs giydmvsnqa anllvqphsh pkaslpegqk vysadsvppe
      961 glpspaggag lmlvppasst svpdsskpgv cggrdvasga ldftfgrtle npagmyspah
     1021 adglasgqqt tashrppgpg antpdrfyqq vmkeaqdqph aeraqqelap plpapqgpra
     1081 alpepsnpgs ppvqaqppdp arpsspalad vgqqllsrpp qsssasvvst sssqaaprpd
     1141 qqwlqppppd lasyyyyrsl ydgwqppyps pyppdpgpap hyyqdmysly dpryrpcdsa
     1201 ayvdpyrype perpssrash csdrpaarqa ypegyynsks gwssqsdyya syyssqydyg
     1261 dpgrwdrfyy gsrfrdpray drrywydaey dscrkenyay gdrpekyddr yrydprftgs
     1321 fddepepprd pygeeadrhs ehsqhsarsl rsapslqsrr ssfsahshqs qvyrshntpa
     1381 gsyevppapg sfhgdyaygp ygsdfhgvpg fpeygyptea swpsveqaps rpsspekfsv
     1441 phvcarfgpg gqlikvipnl psegqpalve ihsmetllqh tpeqeemraf pgplgkddth
     1501 kvdvinfaqn katkclqnen lidkesasll wsfivllcrq ngtvvgtdia elllrdhrtv
     1561 wlpgkspnea nlidftneav eqveeeesge aqlsfltdsq aastlekdte rfrelllygr
     1621 kkdalesamk nglwghalll askmdsrtha rvmtrfansl pindplqtvy qlmsgrmpaa
     1681 stccgdekwg dwrphlamil snlssnvdve sramatmgdt laskglldaa hfcylmaqvg
     1741 fgvytkkttk lvligsnhsl pflkfatnea iqrteayefa qslgaqtcsl psfqvfkfiy
     1801 ccrlaemgla tqafhyceai aksvlaephr hspvllrqla qvasqlrlsd pqlkekpeee
     1861 asaepawlaq lqlverqiee gavawsqdga cpprcsssps pevgprdgpg ptqllslgad
     1921 npllappaps aelfsqdvrl lpsapltlpd gppatptrvp mlpvplpgpa elgpvhgppg
     1981 pvpgfaepsg pdpvalypgp gvptlqdtdr llpearsqda gaapqempgr sshsepgeee
     2041 fggnfanmgs frtspgpeap pqalqppapl mpapevqrpv qaakkeskep kksseswfsr
     2101 wlpvkkrtea ylpddknksi vwdekknrwv dvnepeeekk apppppaall kaphaahpgp
     2161 ggpprptvnm ysrkaagtra ryvdilnpgg pqrsesalap tdlfaplapl pipahllgpn
     2221 adaeevpsak gagregparp epasdpkvfg pavaslpgpe lpasgldgpq ggelsrcssl
     2281 sslsrevsqh fdqapgapap agappgaavp fynpaqlaqa patsgssrtg rigqrkypsl
     2341 s
//
LOCUS       XP_061010255            2321 aa            linear   MAM 02-DEC-2023
DEFINITION  protein transport protein Sec16A isoform X5 [Dama dama].
ACCESSION   XP_061010255
VERSION     XP_061010255.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154272.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2321
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2321
                     /product="protein transport protein Sec16A isoform X5"
                     /calculated_mol_wt=246187
     Region          <3..283
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <652..1149
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1490..1850
                     /region_name="ACE1-Sec16-like"
                     /note="Ancestral coatomer element 1 (ACE1) of COPII coat
                     complex assembly protein Sec16; cd09233"
                     /db_xref="CDD:187750"
     Site            order(1607..1608,1610..1611,1613..1617,1619,1621,1631,
                     1633,1635..1636,1638..1639,1643,1649,1656,1665,1670,1673,
                     1701..1702)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:187750"
     Site            order(1773,1795..1796,1798..1799,1802..1803,1806,
                     1833..1834,1837..1838,1841,1845)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:187750"
     CDS             1..2321
                     /gene="SEC16A"
                     /coded_by="XM_061154272.1:257..7222"
                     /db_xref="GeneID:133064338"
ORIGIN      
        1 mqpppqavps gvvgpppsgs pqtmfwsnsp yrrqagshtp mapitcplqp vtdpfafsrq
       61 alqntslggs skssppilqg papppslpra glpvphtsag dssqgpcepl pgpplqprad
      121 tspfpgvpap saphgpemnr saetpgpepe llnapfppqy ipgvgssgsr ggllqghvpr
      181 pdiplsrpsp pdstvppaai plppqphqqv pgqwgpgqgg prppgqhywp gpegapqipg
      241 phassvthfp ppsslhqrpg heqlgppasl pgpsasdgrn eavylpsedh svnsfdpesa
      301 frqnsragnr ranqelrssp gvnreqlsgl apvnpltqen speshsrhpl gagggwappe
      361 vgsgalamff kggeteneen lssetagsag qavvdgfclg qlpahvgvgg ayqafprgss
      421 sesaqlggep qrcfprsags phekaaskaa amhlwadtar agsqyenven lefvqnqevl
      481 pseplsmdps spgdplkcgp lpgpagprlg avgpaagggp nlealdvtah sarsdsasss
      541 yssksqrglp gaarphdsgt fiqqevgkpe eespgrffkq idsspvgget deitsqnyhg
      601 slsqpstpsp pkptgifqts anssfepvks hlvgvkpvea dranvvgevr gpsapqkqhr
      661 vaaampdaap gnleqppdnm etlsppqlca lplatpteag qgllqaagpp letalptpek
      721 rsstrlqgpv kcespattlw aqnelpdfgg nvllapaapa lhvpakpqls eviqppdegm
      781 arqvglgvqs gdglgasenl enppqlgeee alppqagpgy asllssppte slqnqpvlia
      841 qpdqsynlaq pvnvsvslpn pnektpswrd ssvgdkpavs swaaggdpge nvplsgmpag
      901 sllcsplpnh laqspfpqvs giydmvsnqa anllvqphsh pkaslpegqk vysadsvppe
      961 glpspaggag lmlvppasst svpdsskpgv cggrdvasga ldftfgrtle npagmyspah
     1021 adglasgqqt tashrppgpg antpdrfyqq vmkeaqdqph aeraqqelap plpapqgpra
     1081 alpepsnpgs ppvqaqppdp arpsspalad vgqqllsrpp qsssasvvst sssqaaprpd
     1141 qqwlqppppd lasyyyyrsl ydgwqppyps pyppdpgpap hyyqdmysly dpryrpcdsa
     1201 ayvdpyrype perpssrash csdrpaarqa ypegyynsks gwssqsdyya syyssqydyg
     1261 dpgrwdrfyy gsrfrdpray drrywydaey dscrkenyay gdrpekyddr yrydprftgs
     1321 fddepepprd pygeeadrhs ehsqhsarsl rsapslqsrr ssfsahshqs qvyrshntpa
     1381 gsyevppapg sfhgdyaygp ygsdfhgvpg fpeygyptea swpsveqaps rpsspekfsv
     1441 phvcarfgpg gqlikvipnl psegqpalve ihsmetllqh tpeqeemraf pgplgkddth
     1501 kvdvinfaqn katkclqnen lidkesasll wsfivllcrq ngtvvgtdia elllrdhrtv
     1561 wlpgkspnea nlidftneav eqveeeesge aqlsfltdsq aastlekdte rfrelllygr
     1621 kkdalesamk nglwghalll askmdsrtha rvmtrfansl pindplqtvy qlmsgrmpaa
     1681 stccgdekwg dwrphlamil snlssnvdve sramatmgdt laskglldaa hfcylmaqvg
     1741 fgvytkkttk lvligsnhsl pflkfatnea iqrteayefa qslgaqtcsl psfqvfkfiy
     1801 ccrlaemgla tqafhyceai aksvlaephr hspvllrqla qvasqlrlsd pqlkekpeee
     1861 asaepawlaq lqlverqiee gavawsqdga cpprcsssps pevgprdgpg ptqllslgad
     1921 npllappaps aelfsqdvrl lpsapltlpd gppatptrvp mlpvplpgpa elgpvhgppg
     1981 pvpgfaepsg pdpvalypgp gvptlqdtdr llpearsqda gaapqempgr sshsepgeee
     2041 fggnfanmgs frtspgpeap pqalqppapl mpapevqrpv qaakkeskep kksseswfsr
     2101 wlpvkkrtea ylpddknksi vwdekknrwv dvnepeeekk apppppaall kaphaahpgp
     2161 ggpprptvnm ysrkaagtra ryvdilnpgg pqrsesalap tdlfaplapl pipahllgpn
     2221 adaeevpsak gagregparp epasdpkvfg pavaslpgpe lpasgldgpq ggeapgapap
     2281 agappgaavp fynpaqlaqa patsgssrtg rigqrkypsl s
//
LOCUS       XP_061010256            2315 aa            linear   MAM 02-DEC-2023
DEFINITION  protein transport protein Sec16A isoform X6 [Dama dama].
ACCESSION   XP_061010256
VERSION     XP_061010256.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154273.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2315
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2315
                     /product="protein transport protein Sec16A isoform X6"
                     /calculated_mol_wt=246051
     Region          <3..283
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <652..1149
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1490..1850
                     /region_name="ACE1-Sec16-like"
                     /note="Ancestral coatomer element 1 (ACE1) of COPII coat
                     complex assembly protein Sec16; cd09233"
                     /db_xref="CDD:187750"
     Site            order(1607..1608,1610..1611,1613..1617,1619,1621,1631,
                     1633,1635..1636,1638..1639,1643,1649,1656,1665,1670,1673,
                     1701..1702)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:187750"
     Site            order(1773,1795..1796,1798..1799,1802..1803,1806,
                     1833..1834,1837..1838,1841,1845)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:187750"
     CDS             1..2315
                     /gene="SEC16A"
                     /coded_by="XM_061154273.1:257..7204"
                     /db_xref="GeneID:133064338"
ORIGIN      
        1 mqpppqavps gvvgpppsgs pqtmfwsnsp yrrqagshtp mapitcplqp vtdpfafsrq
       61 alqntslggs skssppilqg papppslpra glpvphtsag dssqgpcepl pgpplqprad
      121 tspfpgvpap saphgpemnr saetpgpepe llnapfppqy ipgvgssgsr ggllqghvpr
      181 pdiplsrpsp pdstvppaai plppqphqqv pgqwgpgqgg prppgqhywp gpegapqipg
      241 phassvthfp ppsslhqrpg heqlgppasl pgpsasdgrn eavylpsedh svnsfdpesa
      301 frqnsragnr ranqelrssp gvnreqlsgl apvnpltqen speshsrhpl gagggwappe
      361 vgsgalamff kggeteneen lssetagsag qavvdgfclg qlpahvgvgg ayqafprgss
      421 sesaqlggep qrcfprsags phekaaskaa amhlwadtar agsqyenven lefvqnqevl
      481 pseplsmdps spgdplkcgp lpgpagprlg avgpaagggp nlealdvtah sarsdsasss
      541 yssksqrglp gaarphdsgt fiqqevgkpe eespgrffkq idsspvgget deitsqnyhg
      601 slsqpstpsp pkptgifqts anssfepvks hlvgvkpvea dranvvgevr gpsapqkqhr
      661 vaaampdaap gnleqppdnm etlsppqlca lplatpteag qgllqaagpp letalptpek
      721 rsstrlqgpv kcespattlw aqnelpdfgg nvllapaapa lhvpakpqls eviqppdegm
      781 arqvglgvqs gdglgasenl enppqlgeee alppqagpgy asllssppte slqnqpvlia
      841 qpdqsynlaq pvnvsvslpn pnektpswrd ssvgdkpavs swaaggdpge nvplsgmpag
      901 sllcsplpnh laqspfpqvs giydmvsnqa anllvqphsh pkaslpegqk vysadsvppe
      961 glpspaggag lmlvppasst svpdsskpgv cggrdvasga ldftfgrtle npagmyspah
     1021 adglasgqqt tashrppgpg antpdrfyqq vmkeaqdqph aeraqqelap plpapqgpra
     1081 alpepsnpgs ppvqaqppdp arpsspalad vgqqllsrpp qsssasvvst sssqaaprpd
     1141 qqwlqppppd lasyyyyrsl ydgwqppyps pyppdpgpap hyyqdmysly dpryrpcdsa
     1201 ayvdpyrype perpssrash csdrpaarqa ypegyynsks gwssqsdyya syyssqydyg
     1261 dpgrwdrfyy gsrfrdpray drrywydaey dscrkenyay gdrpekyddr yrydprftgs
     1321 fddepepprd pygeeadrhs ehsqhsarsl rsapslqsrr ssfsahshqs qvyrshntpa
     1381 gsyevppapg sfhgdyaygp ygsdfhgvpg fpeygyptea swpsveqaps rpsspekfsv
     1441 phvcarfgpg gqlikvipnl psegqpalve ihsmetllqh tpeqeemraf pgplgkddth
     1501 kvdvinfaqn katkclqnen lidkesasll wsfivllcrq ngtvvgtdia elllrdhrtv
     1561 wlpgkspnea nlidftneav eqveeeesge aqlsfltdsq aastlekdte rfrelllygr
     1621 kkdalesamk nglwghalll askmdsrtha rvmtrfansl pindplqtvy qlmsgrmpaa
     1681 stccgdekwg dwrphlamil snlssnvdve sramatmgdt laskglldaa hfcylmaqvg
     1741 fgvytkkttk lvligsnhsl pflkfatnea iqrteayefa qslgaqtcsl psfqvfkfiy
     1801 ccrlaemgla tqafhyceai aksvlaephr hspvllrqla qvasqlrlsd pqlkekpeee
     1861 asaepawlaq lqlverqiee gavawsqdga cpprcsssps pevgprdgpg ptqllslgad
     1921 npllappaps aelfsqdvrl lpsapltlpd gppatptrvp mlpvplpgpa elgpvhgppg
     1981 pvpgfaepsg pdpvalypgp gvptlqdtdr llpearsqda gaapqempgr sshsepgeee
     2041 fggnfanmgs frtspgpeap pqalqppapl mpapevqrpv qaakkeskep kksseswfsr
     2101 wlpvkkrtea ylpddknksi vwdekknrwv dvnepeeekk apppppaall kaphaahpgp
     2161 ggpprptvnm ysrkaagtra ryvdilnpgg pqrsesalap tdlfaplapl pipahllgpn
     2221 adaeevpsak gagregparp epasdpkvfg pavaslpgpe lpasgldgpq ggelsrcssl
     2281 sslsrevsqh fdqapatsgs srtgrigqrk ypsls
//
LOCUS       XP_061010257            2295 aa            linear   MAM 02-DEC-2023
DEFINITION  protein transport protein Sec16A isoform X7 [Dama dama].
ACCESSION   XP_061010257
VERSION     XP_061010257.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154274.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2295
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2295
                     /product="protein transport protein Sec16A isoform X7"
                     /calculated_mol_wt=243803
     Region          <3..283
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <652..1149
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1490..1850
                     /region_name="ACE1-Sec16-like"
                     /note="Ancestral coatomer element 1 (ACE1) of COPII coat
                     complex assembly protein Sec16; cd09233"
                     /db_xref="CDD:187750"
     Site            order(1607..1608,1610..1611,1613..1617,1619,1621,1631,
                     1633,1635..1636,1638..1639,1643,1649,1656,1665,1670,1673,
                     1701..1702)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:187750"
     Site            order(1773,1795..1796,1798..1799,1802..1803,1806,
                     1833..1834,1837..1838,1841,1845)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:187750"
     CDS             1..2295
                     /gene="SEC16A"
                     /coded_by="XM_061154274.1:257..7144"
                     /db_xref="GeneID:133064338"
ORIGIN      
        1 mqpppqavps gvvgpppsgs pqtmfwsnsp yrrqagshtp mapitcplqp vtdpfafsrq
       61 alqntslggs skssppilqg papppslpra glpvphtsag dssqgpcepl pgpplqprad
      121 tspfpgvpap saphgpemnr saetpgpepe llnapfppqy ipgvgssgsr ggllqghvpr
      181 pdiplsrpsp pdstvppaai plppqphqqv pgqwgpgqgg prppgqhywp gpegapqipg
      241 phassvthfp ppsslhqrpg heqlgppasl pgpsasdgrn eavylpsedh svnsfdpesa
      301 frqnsragnr ranqelrssp gvnreqlsgl apvnpltqen speshsrhpl gagggwappe
      361 vgsgalamff kggeteneen lssetagsag qavvdgfclg qlpahvgvgg ayqafprgss
      421 sesaqlggep qrcfprsags phekaaskaa amhlwadtar agsqyenven lefvqnqevl
      481 pseplsmdps spgdplkcgp lpgpagprlg avgpaagggp nlealdvtah sarsdsasss
      541 yssksqrglp gaarphdsgt fiqqevgkpe eespgrffkq idsspvgget deitsqnyhg
      601 slsqpstpsp pkptgifqts anssfepvks hlvgvkpvea dranvvgevr gpsapqkqhr
      661 vaaampdaap gnleqppdnm etlsppqlca lplatpteag qgllqaagpp letalptpek
      721 rsstrlqgpv kcespattlw aqnelpdfgg nvllapaapa lhvpakpqls eviqppdegm
      781 arqvglgvqs gdglgasenl enppqlgeee alppqagpgy asllssppte slqnqpvlia
      841 qpdqsynlaq pvnvsvslpn pnektpswrd ssvgdkpavs swaaggdpge nvplsgmpag
      901 sllcsplpnh laqspfpqvs giydmvsnqa anllvqphsh pkaslpegqk vysadsvppe
      961 glpspaggag lmlvppasst svpdsskpgv cggrdvasga ldftfgrtle npagmyspah
     1021 adglasgqqt tashrppgpg antpdrfyqq vmkeaqdqph aeraqqelap plpapqgpra
     1081 alpepsnpgs ppvqaqppdp arpsspalad vgqqllsrpp qsssasvvst sssqaaprpd
     1141 qqwlqppppd lasyyyyrsl ydgwqppyps pyppdpgpap hyyqdmysly dpryrpcdsa
     1201 ayvdpyrype perpssrash csdrpaarqa ypegyynsks gwssqsdyya syyssqydyg
     1261 dpgrwdrfyy gsrfrdpray drrywydaey dscrkenyay gdrpekyddr yrydprftgs
     1321 fddepepprd pygeeadrhs ehsqhsarsl rsapslqsrr ssfsahshqs qvyrshntpa
     1381 gsyevppapg sfhgdyaygp ygsdfhgvpg fpeygyptea swpsveqaps rpsspekfsv
     1441 phvcarfgpg gqlikvipnl psegqpalve ihsmetllqh tpeqeemraf pgplgkddth
     1501 kvdvinfaqn katkclqnen lidkesasll wsfivllcrq ngtvvgtdia elllrdhrtv
     1561 wlpgkspnea nlidftneav eqveeeesge aqlsfltdsq aastlekdte rfrelllygr
     1621 kkdalesamk nglwghalll askmdsrtha rvmtrfansl pindplqtvy qlmsgrmpaa
     1681 stccgdekwg dwrphlamil snlssnvdve sramatmgdt laskglldaa hfcylmaqvg
     1741 fgvytkkttk lvligsnhsl pflkfatnea iqrteayefa qslgaqtcsl psfqvfkfiy
     1801 ccrlaemgla tqafhyceai aksvlaephr hspvllrqla qvasqlrlsd pqlkekpeee
     1861 asaepawlaq lqlverqiee gavawsqdga cpprcsssps pevgprdgpg ptqllslgad
     1921 npllappaps aelfsqdvrl lpsapltlpd gppatptrvp mlpvplpgpa elgpvhgppg
     1981 pvpgfaepsg pdpvalypgp gvptlqdtdr llpearsqda gaapqempgr sshsepgeee
     2041 fggnfanmgs frtspgpeap pqalqppapl mpapevqrpv qaakkeskep kksseswfsr
     2101 wlpvkkrtea ylpddknksi vwdekknrwv dvnepeeekk apppppaall kaphaahpgp
     2161 ggpprptvnm ysrkaagtra ryvdilnpgg pqrsesalap tdlfaplapl pipahllgpn
     2221 adaeevpsak gagregparp epasdpkvfg pavaslpgpe lpasgldgpq ggeapatsgs
     2281 srtgrigqrk ypsls
//
LOCUS       XP_061010258             781 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphatidylinositol polyphosphate 5-phosphatase type IV isoform X1
            [Dama dama].
ACCESSION   XP_061010258
VERSION     XP_061010258.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154275.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..781
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..781
                     /product="phosphatidylinositol polyphosphate 5-phosphatase
                     type IV isoform X1"
                     /calculated_mol_wt=85048
     Region          307..605
                     /region_name="INPP5c_INPP5E-like"
                     /note="Catalytic inositol polyphosphate 5-phosphatase
                     (INPP5c) domain of Inositol polyphosphate-5-phosphatase E
                     and related proteins; cd09095"
                     /db_xref="CDD:197329"
     Site            order(319,321,352,415..416,436,439..440,489,491,493,
                     546..547,562,568,595..596)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197329"
     Site            order(319,352,436,489,491,568,595..596)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197329"
     Site            order(352,415..416,436,439..440,493,546..547,562,595)
                     /site_type="other"
                     /note="putative PI/IP binding site [chemical binding]"
                     /db_xref="CDD:197329"
     Site            order(352,595)
                     /site_type="other"
                     /note="putative Mg binding site [ion binding]"
                     /db_xref="CDD:197329"
     Site            order(436,491,596)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197329"
     CDS             1..781
                     /gene="INPP5E"
                     /coded_by="XM_061154275.1:369..2714"
                     /db_xref="GeneID:133064339"
ORIGIN      
        1 mpsklaslgh seaasqqptp qgclrpegsm lkgllpnsde epvpclgspa agdrrgpers
       61 pelpldtpeq vsnedpqaqa rpftpkpppp rprleralsl dekgwrkrrf rtsredltvr
      121 ngasplggsl qdetpripar sgsppclsas lqeiptarra pgsggpsswg nclsgmists
      181 ldllhregas agsaprlasl lsprplpamg rnvaseglrt ankvdpdhad yklrlqarlf
      241 rahsslgpgr ppsplacddc slhssrstfs llapirakdv rsrsylegsl lasgalmgad
      301 elaryfpdrt valfvatwnm qgqkelppnl delllpaead laqdlyvvgv qegcsdrrew
      361 etrlqetlgp hyvmlysaah galymsvlir rdliwfcsev esstvttriv sqiktkgalg
      421 vsftffgtsl lfitshftsg dgkvgerlvd ysktvqglal pknvpdtspy rsdaadvttr
      481 fdevfwfgdf nfrlsggrat veailrqdlg ssvqallqhd qltremqrgs ifkgfqepdi
      541 hflpsykfdv gkdsydttsk qrtpsytdrv lfrsrhkddi cpvkysscpg irtsdhrpvy
      601 glfrvkypas cwevrpgavp agnqethlqr dpeaagtqep arqrhlhrll raseegpgts
      661 haqdgtsksr rapaqaglrg adpdlpapwg spaaegphqa sqaqvtrpag rrpnlplghh
      721 vctsrfiigs slparqprpr aallmpsggq gallrpmncl afppsrwvhl lrsrqpraag
      781 a
//
LOCUS       XP_061010259             656 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphatidylinositol polyphosphate 5-phosphatase type IV isoform X2
            [Dama dama].
ACCESSION   XP_061010259
VERSION     XP_061010259.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154276.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..656
                     /product="phosphatidylinositol polyphosphate 5-phosphatase
                     type IV isoform X2"
                     /calculated_mol_wt=72032
     Region          307..605
                     /region_name="INPP5c_INPP5E-like"
                     /note="Catalytic inositol polyphosphate 5-phosphatase
                     (INPP5c) domain of Inositol polyphosphate-5-phosphatase E
                     and related proteins; cd09095"
                     /db_xref="CDD:197329"
     Site            order(319,321,352,415..416,436,439..440,489,491,493,
                     546..547,562,568,595..596)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197329"
     Site            order(319,352,436,489,491,568,595..596)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197329"
     Site            order(352,415..416,436,439..440,493,546..547,562,595)
                     /site_type="other"
                     /note="putative PI/IP binding site [chemical binding]"
                     /db_xref="CDD:197329"
     Site            order(352,595)
                     /site_type="other"
                     /note="putative Mg binding site [ion binding]"
                     /db_xref="CDD:197329"
     Site            order(436,491,596)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197329"
     CDS             1..656
                     /gene="INPP5E"
                     /coded_by="XM_061154276.1:369..2339"
                     /db_xref="GeneID:133064339"
ORIGIN      
        1 mpsklaslgh seaasqqptp qgclrpegsm lkgllpnsde epvpclgspa agdrrgpers
       61 pelpldtpeq vsnedpqaqa rpftpkpppp rprleralsl dekgwrkrrf rtsredltvr
      121 ngasplggsl qdetpripar sgsppclsas lqeiptarra pgsggpsswg nclsgmists
      181 ldllhregas agsaprlasl lsprplpamg rnvaseglrt ankvdpdhad yklrlqarlf
      241 rahsslgpgr ppsplacddc slhssrstfs llapirakdv rsrsylegsl lasgalmgad
      301 elaryfpdrt valfvatwnm qgqkelppnl delllpaead laqdlyvvgv qegcsdrrew
      361 etrlqetlgp hyvmlysaah galymsvlir rdliwfcsev esstvttriv sqiktkgalg
      421 vsftffgtsl lfitshftsg dgkvgerlvd ysktvqglal pknvpdtspy rsdaadvttr
      481 fdevfwfgdf nfrlsggrat veailrqdlg ssvqallqhd qltremqrgs ifkgfqepdi
      541 hflpsykfdv gkdsydttsk qrtpsytdrv lfrsrhkddi cpvkysscpg irtsdhrpvy
      601 glfrvkvrpg rdniplaagk fdrelyllgi krrisreiqr qqalksqhas aictvs
//
LOCUS       XP_061010261             642 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphatidylinositol polyphosphate 5-phosphatase type IV isoform X3
            [Dama dama].
ACCESSION   XP_061010261
VERSION     XP_061010261.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154278.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..642
                     /product="phosphatidylinositol polyphosphate 5-phosphatase
                     type IV isoform X3"
                     /calculated_mol_wt=70373
     Region          307..602
                     /region_name="INPP5c_INPP5E-like"
                     /note="Catalytic inositol polyphosphate 5-phosphatase
                     (INPP5c) domain of Inositol polyphosphate-5-phosphatase E
                     and related proteins; cd09095"
                     /db_xref="CDD:197329"
     Site            order(319,321,352,415..416,436,439..440,489,491,493,
                     546..547,562,568,595..596)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197329"
     Site            order(319,352,436,489,491,568,595..596)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197329"
     Site            order(352,415..416,436,439..440,493,546..547,562,595)
                     /site_type="other"
                     /note="putative PI/IP binding site [chemical binding]"
                     /db_xref="CDD:197329"
     Site            order(352,595)
                     /site_type="other"
                     /note="putative Mg binding site [ion binding]"
                     /db_xref="CDD:197329"
     Site            order(436,491,596)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197329"
     CDS             1..642
                     /gene="INPP5E"
                     /coded_by="XM_061154278.1:369..2297"
                     /db_xref="GeneID:133064339"
ORIGIN      
        1 mpsklaslgh seaasqqptp qgclrpegsm lkgllpnsde epvpclgspa agdrrgpers
       61 pelpldtpeq vsnedpqaqa rpftpkpppp rprleralsl dekgwrkrrf rtsredltvr
      121 ngasplggsl qdetpripar sgsppclsas lqeiptarra pgsggpsswg nclsgmists
      181 ldllhregas agsaprlasl lsprplpamg rnvaseglrt ankvdpdhad yklrlqarlf
      241 rahsslgpgr ppsplacddc slhssrstfs llapirakdv rsrsylegsl lasgalmgad
      301 elaryfpdrt valfvatwnm qgqkelppnl delllpaead laqdlyvvgv qegcsdrrew
      361 etrlqetlgp hyvmlysaah galymsvlir rdliwfcsev esstvttriv sqiktkgalg
      421 vsftffgtsl lfitshftsg dgkvgerlvd ysktvqglal pknvpdtspy rsdaadvttr
      481 fdevfwfgdf nfrlsggrat veailrqdlg ssvqallqhd qltremqrgs ifkgfqepdi
      541 hflpsykfdv gkdsydttsk qrtpsytdrv lfrsrhkddi cpvkysscpg irtsdhrpvi
      601 plaagkfdre lyllgikrri sreiqrqqal ksqhasaict vs
//
LOCUS       XP_061010262             525 aa            linear   MAM 02-DEC-2023
DEFINITION  mitochondrial-processing peptidase subunit alpha [Dama dama].
ACCESSION   XP_061010262
VERSION     XP_061010262.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154279.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..525
                     /product="mitochondrial-processing peptidase subunit
                     alpha"
                     /calculated_mol_wt=58251
     Region          62..489
                     /region_name="PqqL"
                     /note="Predicted Zn-dependent peptidase, M16 family
                     [General function prediction only]; COG0612"
                     /db_xref="CDD:440377"
     CDS             1..525
                     /gene="PMPCA"
                     /coded_by="XM_061154279.1:43..1620"
                     /db_xref="GeneID:133064340"
ORIGIN      
        1 maamvlaatr llrgsgswgr srlrfgdpay rrfssggayp niplssplpg vpkpvfatvd
       61 gqekfetkvt tldnglrvas qnkfgqfctv gilinsgsry eakylsgiah fleklafsst
      121 drfdskdeil ltlekhggic dcqtsrdttm yavsadskgl dtvvglladv vlhprltdee
      181 iemtrmavqf eledlnmrpd peplltemih eaayrentvg lhrfcpveni gkidrdvlhs
      241 ylrnyytpdr mvlagvgveh aqlvecarky llgtrpawgt gaavhvdrsv aqytggivkl
      301 erdmsnvslg ptpfpelthi miglescsfl egdfipfavl nmmmggggsf saggpgkgmf
      361 trlylnvlnr hhwmynatsy hhsyedtgll cihasadprq vremveiitr efvlmagtvd
      421 vveleraktq lmsmlmmnle arpvifedvg rqvlatrsrk lphelcalir dvkpedikrv
      481 askmlrgkpa maalgdlsel payehvqtal asrdgrlprt yrlfr
//
LOCUS       XP_061010263             432 aa            linear   MAM 02-DEC-2023
DEFINITION  endosome-associated-trafficking regulator 1 isoform X1 [Dama dama].
ACCESSION   XP_061010263
VERSION     XP_061010263.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154280.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..432
                     /product="endosome-associated-trafficking regulator 1
                     isoform X1"
                     /calculated_mol_wt=47603
     Region          250..>431
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     CDS             1..432
                     /gene="ENTR1"
                     /coded_by="XM_061154280.1:56..1354"
                     /db_xref="GeneID:133064341"
ORIGIN      
        1 magyarrpgv tplsrarslv ipdapafyer rsclpqldce rppardlesh ffgirptfmc
       61 yvpspvlasv gdtdfgygkg kcakqgppga qnthfgddkl gdleaanpfs fkeflktknl
      121 glskedsdsr vyskeatrhs lgldrtspas qtvgygleyq qpffedptga gdlldedede
      181 ddgwngaylp sameqthssr vaastspcst yvsflsnpse lvgpeslppw tlsdsdshis
      241 ptgspsadft ahgeslgnrh lrtlqisyea lkdensklrr kltevqsfse tqtemvrtle
      301 rkleakmike esdyhdlesv vqqveqnlel mtkravkaen hvlklkqevs llqaqisnfk
      361 renealrsgq gasltvvkqn tdvalqnlrv vmnnahtsik qlvsgaetln lvaeilksid
      421 riseikdqge es
//
LOCUS       XP_061010264             409 aa            linear   MAM 02-DEC-2023
DEFINITION  endosome-associated-trafficking regulator 1 isoform X2 [Dama dama].
ACCESSION   XP_061010264
VERSION     XP_061010264.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154281.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..409
                     /product="endosome-associated-trafficking regulator 1
                     isoform X2"
                     /calculated_mol_wt=45256
     Region          <235..>408
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..409
                     /gene="ENTR1"
                     /coded_by="XM_061154281.1:49..1278"
                     /db_xref="GeneID:133064341"
ORIGIN      
        1 magyarrpgv tplsrarslv ipdapafyer rsclpqldce rppardlesh ffgirptfmc
       61 yvpspvlasv gdtddklgdl eaanpfsfke flktknlgls kedsdsrvys keatrhslgl
      121 drtspasqtv gygleyqqpf fedptgagdl ldedededdg wngaylpsam eqthssrvaa
      181 stspcstyvs flsnpselvg peslppwtls dsdshisptg spsadftahg eslgnrhlrt
      241 lqisyealkd ensklrrklt evqsfsetqt emvrtlerkl eakmikeesd yhdlesvvqq
      301 veqnlelmtk ravkaenhvl klkqevsllq aqisnfkren ealrsgqgas ltvvkqntdv
      361 alqnlrvvmn nahtsikqlv sgaetlnlva eilksidris eikdqgees
//
LOCUS       XP_061010265             400 aa            linear   MAM 02-DEC-2023
DEFINITION  endosome-associated-trafficking regulator 1 isoform X3 [Dama dama].
ACCESSION   XP_061010265
VERSION     XP_061010265.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154282.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..400
                     /product="endosome-associated-trafficking regulator 1
                     isoform X3"
                     /calculated_mol_wt=44121
     Region          250..>367
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     CDS             1..400
                     /gene="ENTR1"
                     /coded_by="XM_061154282.1:82..1284"
                     /db_xref="GeneID:133064341"
ORIGIN      
        1 magyarrpgv tplsrarslv ipdapafyer rsclpqldce rppardlesh ffgirptfmc
       61 yvpspvlasv gdtdfgygkg kcakqgppga qnthfgddkl gdleaanpfs fkeflktknl
      121 glskedsdsr vyskeatrhs lgldrtspas qtvgygleyq qpffedptga gdlldedede
      181 ddgwngaylp sameqthssr vaastspcst yvsflsnpse lvgpeslppw tlsdsdshis
      241 ptgspsadft ahgeslgnrh lrtlqisyea lkdensklrr kltevqsfse tqtemvrtle
      301 rkleakmike esdyhdlesv vqqveqnlel mtkravkaen hvlklkqevs llqaqisnfk
      361 renealrsgq gasltvvkqn tdvalqnlrv vmnnahtsin
//
LOCUS       XP_061010266             382 aa            linear   MAM 02-DEC-2023
DEFINITION  endosome-associated-trafficking regulator 1 isoform X4 [Dama dama].
ACCESSION   XP_061010266
VERSION     XP_061010266.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154283.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..382
                     /product="endosome-associated-trafficking regulator 1
                     isoform X4"
                     /calculated_mol_wt=41977
     Region          <208..>381
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..382
                     /gene="ENTR1"
                     /coded_by="XM_061154283.1:37..1185"
                     /db_xref="GeneID:133064341"
ORIGIN      
        1 magyarrpgv tplsrarslv ipddfgygkg kcakqgppga qnthfgddkl gdleaanpfs
       61 fkeflktknl glskedsdsr vyskeatrhs lgldrtspas qtvgygleyq qpffedptga
      121 gdlldedede ddgwngaylp sameqthssr vaastspcst yvsflsnpse lvgpeslppw
      181 tlsdsdshis ptgspsadft ahgeslgnrh lrtlqisyea lkdensklrr kltevqsfse
      241 tqtemvrtle rkleakmike esdyhdlesv vqqveqnlel mtkravkaen hvlklkqevs
      301 llqaqisnfk renealrsgq gasltvvkqn tdvalqnlrv vmnnahtsik qlvsgaetln
      361 lvaeilksid riseikdqge es
//
LOCUS       XP_061010267             359 aa            linear   MAM 02-DEC-2023
DEFINITION  endosome-associated-trafficking regulator 1 isoform X5 [Dama dama].
ACCESSION   XP_061010267
VERSION     XP_061010267.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154284.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..359
                     /product="endosome-associated-trafficking regulator 1
                     isoform X5"
                     /calculated_mol_wt=39629
     Region          <185..>358
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..359
                     /gene="ENTR1"
                     /coded_by="XM_061154284.1:42..1121"
                     /db_xref="GeneID:133064341"
ORIGIN      
        1 magyarrpgv tplsrarslv ipdddklgdl eaanpfsfke flktknlgls kedsdsrvys
       61 keatrhslgl drtspasqtv gygleyqqpf fedptgagdl ldedededdg wngaylpsam
      121 eqthssrvaa stspcstyvs flsnpselvg peslppwtls dsdshisptg spsadftahg
      181 eslgnrhlrt lqisyealkd ensklrrklt evqsfsetqt emvrtlerkl eakmikeesd
      241 yhdlesvvqq veqnlelmtk ravkaenhvl klkqevsllq aqisnfkren ealrsgqgas
      301 ltvvkqntdv alqnlrvvmn nahtsikqlv sgaetlnlva eilksidris eikdqgees
//
LOCUS       XP_061010268            1344 aa            linear   MAM 02-DEC-2023
DEFINITION  snRNA-activating protein complex subunit 4 [Dama dama].
ACCESSION   XP_061010268
VERSION     XP_061010268.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154285.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1344
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1344
                     /product="snRNA-activating protein complex subunit 4"
                     /calculated_mol_wt=145962
     Region          207..>252
                     /region_name="Prefoldin"
                     /note="prefoldin; cl09111"
                     /db_xref="CDD:471851"
     Region          252..>497
                     /region_name="REB1"
                     /note="Myb superfamily proteins, including transcription
                     factors and mRNA splicing factors [Transcription / RNA
                     processing and modification / Cell division and chromosome
                     partitioning]; COG5147"
                     /db_xref="CDD:227476"
     Region          406..449
                     /region_name="SANT"
                     /note="'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains.
                     Tandem copies of the domain bind telomeric DNA tandem
                     repeatsas part of the capping complex. Binding is sequence
                     dependent for repeats which contain the G/C rich motif
                     [C2-3 A (CA)1-6]. The domain is...; cd00167"
                     /db_xref="CDD:238096"
     Site            order(406,436..437,439..440,442..444,446..448)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238096"
     Region          455..498
                     /region_name="SANT"
                     /note="SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding
                     domains; smart00717"
                     /db_xref="CDD:197842"
     Site            order(458,488..489,491..492,494..496,498)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238096"
     Region          <886..1326
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1344
                     /gene="SNAPC4"
                     /coded_by="XM_061154285.1:429..4463"
                     /db_xref="GeneID:133064342"
ORIGIN      
        1 mdvdaereri sreiqqleri ldpccsslsm dvsessldsd sdadslpded sdsdvagpll
       61 seeerwgeas ndeddpkeka lpedpetclq lnmvyqevvr eklaevslll aqnreqqeei
      121 mgdlagvkgp kvkdgrsppp nlylghfmkp yfrdrvtgvg ppanedtrek aaqgikafee
      181 llvtkwktwe kvllrksvvs drlqrllqpk llkleylqqk qnraaseler rvlekqarea
      241 ekevqdinql peevllgdrl dghdwdkisn vnfegsrste eirkfwqnye hpsinkqews
      301 eqevaqlkav aakhghldwq riaeelgtrr safqclqqyq qhnpalkrke wteeedrilt
      361 rlvqamrvgs hipyrrivyy megrdsmqli yrwtksldpg lkkglwapee dakllqavak
      421 ygeqdwfkir eevpgrsdaq crdrylrrlh fslkkgrwnp keveklieli ekygvghwak
      481 iaselphrsg sqclskwkim vrqrqrqarr raprrarwsp ssgsssdgsw edsepeeapk
      541 dapeeapags pepppapytv pdmdlwvpar qspeelwgag aggcpcppeg pntapatapa
      601 papagqlasr gwstnprsir clcpaiarhw ssegppgeqe rpgsalgpsp gsssrdearp
      661 rmrppwagtv qqrqghalqw rllehkllta vspwvgevdl lcarprpavr prradgirrq
      721 lqgahlastp vfalfiqlfq idtpgcvevv rerktwppsl lqagawdppp lqepssahst
      781 pgcltqsvpa qgaakqgtcp evgkgmqacr aastppapap apckprpkpk tvsellrekr
      841 lreararraa qgptilparv lvsspvvlqp lappaapvps vmlsgpggpl vtsftasgsw
      901 apakdeqalt lhafalgpaa srapspvpas cplsalgqsq vpatsrkqgl pevppflpaa
      961 pspvqlpvqs lsltpalgtp aaastslpvt wvltaqgllp vplqavmslp tptgapdptr
     1021 lsvtlppspt etpasrgpgf peqsrpgppa astdsepepp crteplnesp aevakacgla
     1081 glaspgeala agetsapttp sqetplahhp vtgppssspp plhgapgaas gpgeprprdl
     1141 eepplswlgl enkaldlsll sqeseaaare wlqgqrgvpa papgsrlayq ppmlcslral
     1201 sglllrkkdl ehgaavlapg gpagalqasl grvrerlrds paylllrarf laafalpall
     1261 atlsprgvpt tlsvstgpdp etdsdqldpe epeltdsdgd agdpaqgapd psqgsapscp
     1321 dspddpdvlq trrsrhvrkr rrlq
//
LOCUS       XP_061010269             674 aa            linear   MAM 02-DEC-2023
DEFINITION  G-protein-signaling modulator 1 isoform X1 [Dama dama].
ACCESSION   XP_061010269
VERSION     XP_061010269.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154286.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..674
                     /product="G-protein-signaling modulator 1 isoform X1"
                     /calculated_mol_wt=74074
     Region          30..55
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          67..93
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          68..321
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Site            order(69..70,73..74,76,106,109..110,113..114,116..117,146,
                     149..150,153..154,157)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          104..134
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          <181..474
                     /region_name="COG3899"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443106"
     Region          206..233
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(246,249..250,253..254,256,286,289..290,293..294,
                     296..297,320,329..330,333..334,337)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          246..273
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          284..314
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          319..353
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          493..514
                     /region_name="GoLoco"
                     /note="GoLoco motif; pfam02188"
                     /db_xref="CDD:460481"
     Region          546..566
                     /region_name="GoLoco"
                     /note="GoLoco motif; pfam02188"
                     /db_xref="CDD:460481"
     Region          594..613
                     /region_name="GoLoco"
                     /note="GoLoco motif; pfam02188"
                     /db_xref="CDD:460481"
     Region          628..649
                     /region_name="GoLoco"
                     /note="GoLoco motif; pfam02188"
                     /db_xref="CDD:460481"
     CDS             1..674
                     /gene="GPSM1"
                     /coded_by="XM_061154286.1:16..2040"
                     /db_xref="GeneID:133064344"
ORIGIN      
        1 magpappaad elpgparrly srmeasclel alegerlcka gdfkagvaff eaavqvgted
       61 lktlsaiysq lgnayfylke yaraleyhkh dlllartigd rmgeakasgn lgntlkvlgr
      121 fdeavvccqr hldiaqeqgd kvgearalyn ignvyhakgk qlswsaaqdp ghlppavret
      181 lrrasefyer nlslvkelgd raaqgraygn lgnthyllgs fteattfhke rlaiakefgd
      241 kaaerraysn lgnahiflgr fdvaaeyykk tlqlsrqlkd qaveaqacys lgntytllqd
      301 yeraaeyhlr hlliaqelad rvgegracws lgnayvsmgs paqaltfakk hleisqeigd
      361 rsgeltarmn vaqlqlalgr laspaaaekp dlagyeaqga rpkrtqrlsa etwdllrlpl
      421 ereqngdshh agdwrgpgrd llplpvrsrk yqegpdaaer rpregghspl dsadvrvqlp
      481 rtsiprapss deecffdlls kfqssrmddq rcpledgqpa aaeatatptl egrvaqpslt
      541 aspqteeffd liassqsrrl ddqrasvgsl pglrithnnl ghlrgdgdpq epgdeffnml
      601 ikcqssridd qrcpppdvpp rgptmpdedf fsliqrvqak rmdeqrvdla gspeqevgga
      661 gapeprqqcq pgas
//
LOCUS       XP_061010270             168 aa            linear   MAM 02-DEC-2023
DEFINITION  G-protein-signaling modulator 1 isoform X2 [Dama dama].
ACCESSION   XP_061010270
VERSION     XP_061010270.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154287.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..168
                     /product="G-protein-signaling modulator 1 isoform X2"
                     /calculated_mol_wt=18118
     Region          40..60
                     /region_name="GoLoco"
                     /note="GoLoco motif; pfam02188"
                     /db_xref="CDD:460481"
     Region          88..107
                     /region_name="GoLoco"
                     /note="GoLoco motif; pfam02188"
                     /db_xref="CDD:460481"
     Region          122..143
                     /region_name="GoLoco"
                     /note="GoLoco motif; pfam02188"
                     /db_xref="CDD:460481"
     CDS             1..168
                     /gene="GPSM1"
                     /coded_by="XM_061154287.1:267..773"
                     /db_xref="GeneID:133064344"
ORIGIN      
        1 mddqrcpled gqpaaaeata tptlegrvaq psltaspqte effdliassq srrlddqras
       61 vgslpglrit hnnlghlrgd gdpqepgdef fnmlikcqss riddqrcppp dvpprgptmp
      121 dedffsliqr vqakrmdeqr vdlagspeqe vggagapepr qqcqpgas
//
LOCUS       XP_061010272             606 aa            linear   MAM 02-DEC-2023
DEFINITION  caspase recruitment domain-containing protein 9 isoform X1 [Dama
            dama].
ACCESSION   XP_061010272
VERSION     XP_061010272.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154289.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..606
                     /product="caspase recruitment domain-containing protein 9
                     isoform X1"
                     /calculated_mol_wt=66796
     Region          10..95
                     /region_name="CARD_CARD9"
                     /note="Caspase activation and recruitment domain of
                     CARD9-like proteins; cd08809"
                     /db_xref="CDD:260071"
     Site            order(23,26,29,60)
                     /site_type="other"
                     /note="putative BCL10 interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:260071"
     Region          <119..>353
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..606
                     /gene="CARD9"
                     /coded_by="XM_061154289.1:156..1976"
                     /db_xref="GeneID:133064345"
ORIGIN      
        1 msdyenedac wsalegfrvk lisiidpari tpylrqckvm npddeeqvls dpnlvtrkrk
       61 vgvlldilqr tghkgyvafl eslelyypql yrkvtgkept rvfsmiidas gesgltqllm
      121 sevmklqkkv qeltallgsr ddlaeelrvk dsllrklqer vqrlkeacea gsrelqrckd
      181 enydlalrla rqseerdaal tghrglllei dqlkhslmka eddcrverkh tlklrhamel
      241 rpsqellwel qqekallqar vqgleasvqe gkpdqghpyv qvpegdwqra qrdlqqqaat
      301 ifslrkdlrq aealrtrsae ekemfelqcl alrrdskmyk drieailrqm eevaierdqv
      361 gtrwpawthq plwggsrqgh pdaggaacta raqsagqgha aeagpraere ggrapaaavp
      421 argpaaghgg qapaaaagra hpelrpgrql tqefpgvlap pgpgggypal rqrqpghrge
      481 pgaavcgpag gaaitdpggr rterpgapre gegpaapqge lrelpqeagp pedaarraag
      541 gggwrehhgq rqhrhrgrla sppvrpspsr eggaarrgrl fvgehgrvls lcdahacrdl
      601 kaqpyq
//
LOCUS       XP_061010273             570 aa            linear   MAM 02-DEC-2023
DEFINITION  caspase recruitment domain-containing protein 9 isoform X2 [Dama
            dama].
ACCESSION   XP_061010273
VERSION     XP_061010273.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154290.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..570
                     /product="caspase recruitment domain-containing protein 9
                     isoform X2"
                     /calculated_mol_wt=63821
     Region          10..95
                     /region_name="CARD_CARD9"
                     /note="Caspase activation and recruitment domain of
                     CARD9-like proteins; cd08809"
                     /db_xref="CDD:260071"
     Site            order(23,26,29,60)
                     /site_type="other"
                     /note="putative BCL10 interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:260071"
     Region          <119..>353
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..570
                     /gene="CARD9"
                     /coded_by="XM_061154290.1:156..1868"
                     /db_xref="GeneID:133064345"
ORIGIN      
        1 msdyenedac wsalegfrvk lisiidpari tpylrqckvm npddeeqvls dpnlvtrkrk
       61 vgvlldilqr tghkgyvafl eslelyypql yrkvtgkept rvfsmiidas gesgltqllm
      121 sevmklqkkv qeltallgsr ddlaeelrvk dsllrklqer vqrlkeacea gsrelqrckd
      181 enydlalrla rqseerdaal tghrglllei dqlkhslmka eddcrverkh tlklrhamel
      241 rpsqellwel qqekallqar vqgleasvqe gkpdqghpyv qvpegdwqra qrdlqqqaat
      301 ifslrkdlrq aealrtrsae ekemfelqcl alrrdskmyk drieailrqm eevaierdqv
      361 gtrwpawthq plwggsrqgh pdaggaacta raqsagqgha aeagpraere ggrapaaavp
      421 argpaaghgg qapaaaagra hpelrpgrql tqefpggqrs drpmslgkfs ppqdleedtq
      481 lsdkgslvig espeqpsvaq qeeqlsltpe daglngrepp ekekgrrrlk esfenyrrkr
      541 alrkmqhgar qgeadgentt gsdntdtega
//
LOCUS       XP_061010274             549 aa            linear   MAM 02-DEC-2023
DEFINITION  caspase recruitment domain-containing protein 9 isoform X3 [Dama
            dama].
ACCESSION   XP_061010274
VERSION     XP_061010274.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154291.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..549
                     /product="caspase recruitment domain-containing protein 9
                     isoform X3"
                     /calculated_mol_wt=63142
     Region          10..95
                     /region_name="CARD_CARD9"
                     /note="Caspase activation and recruitment domain of
                     CARD9-like proteins; cd08809"
                     /db_xref="CDD:260071"
     Site            order(23,26,29,60)
                     /site_type="other"
                     /note="putative BCL10 interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:260071"
     Region          <154..>417
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..549
                     /gene="CARD9"
                     /coded_by="XM_061154291.1:156..1805"
                     /db_xref="GeneID:133064345"
ORIGIN      
        1 msdyenedac wsalegfrvk lisiidpari tpylrqckvm npddeeqvls dpnlvtrkrk
       61 vgvlldilqr tghkgyvafl eslelyypql yrkvtgkept rvfsmiidas gesgltqllm
      121 sevmklqkkv qeltallgsr ddlaeelrvk dsllrklqer vqrlkeacea gsrelqrckd
      181 enydlalrla rqseerdaal tghrglllei dqlkhslmka eddcrverkh tlklrhamel
      241 rpsqellwel qqekallqar vqgleasvqe gkpdqghpyv qvpegdwqra qrdlqqqaat
      301 ifslrkdlrq aealrtrsae ekemfelqcl alrrdskmyk drieailrqm eevaierdqa
      361 tlmreelhaq harslqdkdt lrkqvrelse kvdelqlqlf qregqllame gklrrrqldv
      421 lilssdleds sprnsqersd rpmslgkfsp pqdleedtql sdkgslvige speqpsvaqq
      481 eeqlsltped aglngreppe kekgrrrlke sfenyrrkra lrkmqhgarq geadgenttg
      541 sdntdtega
//
LOCUS       XP_061010275             542 aa            linear   MAM 02-DEC-2023
DEFINITION  caspase recruitment domain-containing protein 9 isoform X4 [Dama
            dama].
ACCESSION   XP_061010275
VERSION     XP_061010275.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154292.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..542
                     /product="caspase recruitment domain-containing protein 9
                     isoform X4"
                     /calculated_mol_wt=60677
     Region          10..95
                     /region_name="CARD_CARD9"
                     /note="Caspase activation and recruitment domain of
                     CARD9-like proteins; cd08809"
                     /db_xref="CDD:260071"
     Site            order(23,26,29,60)
                     /site_type="other"
                     /note="putative BCL10 interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:260071"
     Region          <119..>353
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..542
                     /gene="CARD9"
                     /coded_by="XM_061154292.1:156..1784"
                     /db_xref="GeneID:133064345"
ORIGIN      
        1 msdyenedac wsalegfrvk lisiidpari tpylrqckvm npddeeqvls dpnlvtrkrk
       61 vgvlldilqr tghkgyvafl eslelyypql yrkvtgkept rvfsmiidas gesgltqllm
      121 sevmklqkkv qeltallgsr ddlaeelrvk dsllrklqer vqrlkeacea gsrelqrckd
      181 enydlalrla rqseerdaal tghrglllei dqlkhslmka eddcrverkh tlklrhamel
      241 rpsqellwel qqekallqar vqgleasvqe gkpdqghpyv qvpegdwqra qrdlqqqaat
      301 ifslrkdlrq aealrtrsae ekemfelqcl alrrdskmyk drieailrqm eevaierdqv
      361 gtrwpawthq plwggsrqgh pdaggaacta raqsagqgha aeagpraere ggrapaaavp
      421 argpaaghgg qapaaaagra hpelrpgrql tqefpggslv igespeqpsv aqqeeqlslt
      481 pedaglngre ppekekgrrr lkesfenyrr kralrkmqhg arqgeadgen ttgsdntdte
      541 ga
//
LOCUS       XP_061010276             539 aa            linear   MAM 02-DEC-2023
DEFINITION  caspase recruitment domain-containing protein 9 isoform X5 [Dama
            dama].
ACCESSION   XP_061010276
VERSION     XP_061010276.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154293.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..539
                     /product="caspase recruitment domain-containing protein 9
                     isoform X5"
                     /calculated_mol_wt=62013
     Region          10..95
                     /region_name="CARD_CARD9"
                     /note="Caspase activation and recruitment domain of
                     CARD9-like proteins; cd08809"
                     /db_xref="CDD:260071"
     Site            order(23,26,29,60)
                     /site_type="other"
                     /note="putative BCL10 interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:260071"
     Region          <154..>417
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..539
                     /gene="CARD9"
                     /coded_by="XM_061154293.1:156..1775"
                     /db_xref="GeneID:133064345"
ORIGIN      
        1 msdyenedac wsalegfrvk lisiidpari tpylrqckvm npddeeqvls dpnlvtrkrk
       61 vgvlldilqr tghkgyvafl eslelyypql yrkvtgkept rvfsmiidas gesgltqllm
      121 sevmklqkkv qeltallgsr ddlaeelrvk dsllrklqer vqrlkeacea gsrelqrckd
      181 enydlalrla rqseerdaal tghrglllei dqlkhslmka eddcrverkh tlklrhamel
      241 rpsqellwel qqekallqar vqgleasvqe gkpdqghpyv qvpegdwqra qrdlqqqaat
      301 ifslrkdlrq aealrtrsae ekemfelqcl alrrdskmyk drieailrqm eevaierdqa
      361 tlmreelhaq harslqdkdt lrkqvrelse kvdelqlqlf qregqllame gklrrrqldv
      421 lilssdleds sprnsqefsp pqdleedtql sdkgslvige speqpsvaqq eeqlsltped
      481 aglngreppe kekgrrrlke sfenyrrkra lrkmqhgarq geadgenttg sdntdtega
//
LOCUS       XP_061010277             458 aa            linear   MAM 02-DEC-2023
DEFINITION  caspase recruitment domain-containing protein 9 isoform X6 [Dama
            dama].
ACCESSION   XP_061010277
VERSION     XP_061010277.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154294.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..458
                     /product="caspase recruitment domain-containing protein 9
                     isoform X6"
                     /calculated_mol_wt=51357
     Region          10..95
                     /region_name="CARD_CARD9"
                     /note="Caspase activation and recruitment domain of
                     CARD9-like proteins; cd08809"
                     /db_xref="CDD:260071"
     Site            order(23,26,29,60)
                     /site_type="other"
                     /note="putative BCL10 interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:260071"
     Region          <119..>353
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..458
                     /gene="CARD9"
                     /coded_by="XM_061154294.1:156..1532"
                     /db_xref="GeneID:133064345"
ORIGIN      
        1 msdyenedac wsalegfrvk lisiidpari tpylrqckvm npddeeqvls dpnlvtrkrk
       61 vgvlldilqr tghkgyvafl eslelyypql yrkvtgkept rvfsmiidas gesgltqllm
      121 sevmklqkkv qeltallgsr ddlaeelrvk dsllrklqer vqrlkeacea gsrelqrckd
      181 enydlalrla rqseerdaal tghrglllei dqlkhslmka eddcrverkh tlklrhamel
      241 rpsqellwel qqekallqar vqgleasvqe gkpdqghpyv qvpegdwqra qrdlqqqaat
      301 ifslrkdlrq aealrtrsae ekemfelqcl alrrdskmyk drieailrqm eevaierdqv
      361 gtrwpawthq plwggsrqgh pdaggaacta raqsagqgha aeagpraere ggrapaaavp
      421 argpaaghgg qapaaaagra hpelrpgrql tqefpgav
//
LOCUS       XP_061010278             169 aa            linear   MAM 02-DEC-2023
DEFINITION  DNL-type zinc finger protein [Dama dama].
ACCESSION   XP_061010278
VERSION     XP_061010278.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154295.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..169
                     /product="DNL-type zinc finger protein"
                     /calculated_mol_wt=18246
     Region          61..126
                     /region_name="zf-DNL"
                     /note="DNL zinc finger; pfam05180"
                     /db_xref="CDD:461571"
     CDS             1..169
                     /gene="DNLZ"
                     /coded_by="XM_061154295.1:42..551"
                     /db_xref="GeneID:133064346"
ORIGIN      
        1 mlraalsrvp illsrarprg pgprwlwgpg vrlqaagtrr awgwgwrrls sepgpgpahy
       61 qlvytckvcg trsskriskl ayhqgvaivt cpgcqnhhii adnlgwfsdl dgkrnieeil
      121 aargekvrrv agegalelll eavvppkatt aaegaedqdp trpgkteas
//
LOCUS       XP_061010279             704 aa            linear   MAM 02-DEC-2023
DEFINITION  sulfhydryl oxidase 2 [Dama dama].
ACCESSION   XP_061010279
VERSION     XP_061010279.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154296.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..704
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..704
                     /product="sulfhydryl oxidase 2"
                     /calculated_mol_wt=77046
     Region          68..180
                     /region_name="PDI_a_QSOX"
                     /note="PDIa family, Quiescin-sulfhydryl oxidase (QSOX)
                     subfamily; QSOX is a eukaryotic protein containing an
                     N-terminal redox active TRX domain, similar to that of
                     PDI, and a small C-terminal flavin adenine dinucleotide
                     (FAD)-binding domain homologous to the...; cd02992"
                     /db_xref="CDD:239290"
     Site            order(98,101)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239290"
     Region          192..299
                     /region_name="QSOX_Trx1"
                     /note="QSOX Trx-like domain; pfam18108"
                     /db_xref="CDD:465653"
     Region          325..428
                     /region_name="FAD_SOX"
                     /note="Flavin adenine dinucleotide (FAD)-dependent
                     sulfhydryl oxidase; pfam18371"
                     /db_xref="CDD:465728"
     Region          437..538
                     /region_name="Evr1_Alr"
                     /note="Erv1 / Alr family; pfam04777"
                     /db_xref="CDD:461423"
     CDS             1..704
                     /gene="QSOX2"
                     /coded_by="XM_061154296.1:1..2115"
                     /db_xref="GeneID:133064347"
ORIGIN      
        1 maaagtvasa arspgapaaa aaaaaartrr ppparparlp pvlvllaaaa aagpgaggaa
       61 rlyragedav wvldsgsvrk atanssaawl vqfysswcgh cigyaptwra laadvrdwaa
      121 airvaaldca eeknqevcra ydihfyptfr yfkaftkdft tgenfkgpdr elqtvrrtmi
      181 nflqnhtdgn rppacpsldp irpsdvlsli errgdryvav lleddssyvg revildlipy
      241 envevkralg sdttflqklg vpslpscyli ypngshgsvt vgkplrsffs sylrslpgvr
      301 kkpsslpgrp sreesseavv wrdfdrskly tadlesglhh llrvelaahr slagaelktl
      361 kdfvtvlakl fpgrppvrkl lemlqewlas lpldripyda vldlvnnkmr isgifltnhv
      421 kwvgcqgsrp elrgyscslw klfhtltvga gthpkaldgt gleddpqavl qtirryvhvf
      481 fgckecgehf eemakesids vktpdqailw lwkkhnlvns rlaghpsedp kfpkvpwpsp
      541 dlcpacheei kglgtwnegq vllflkqhys rdnlvdthsa dlggpgegal apgekqegsr
      601 appeqppadh gaeslrppsl lpprprpser sqpgldlplg sraggegprg aeaaaaflgm
      661 gfssldmslc vllyvasslf lmvmyfffrv rskrwkvkhh hpsv
//
LOCUS       XP_061010280             139 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 250 [Dama dama].
ACCESSION   XP_061010280
VERSION     XP_061010280.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154297.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..139
                     /product="transmembrane protein 250"
                     /calculated_mol_wt=15882
     Region          1..139
                     /region_name="DUF5533"
                     /note="Family of unknown function (DUF5533); pfam17685"
                     /db_xref="CDD:375254"
     CDS             1..139
                     /gene="TMEM250"
                     /coded_by="XM_061154297.1:404..823"
                     /db_xref="GeneID:133064349"
ORIGIN      
        1 mpvmpiprrv rsfhgphttc lhaacgpara srpvrtkynn fdvyvrarwl ygfirfllyf
       61 scslftaalw galaalfclq ylgvrvllrf qlklsallll lgrrrvdfrl lnellvygih
      121 vtmllvgglg wcfmvfvdm
//
LOCUS       XP_061010281             586 aa            linear   MAM 02-DEC-2023
DEFINITION  nucleus accumbens-associated protein 2 isoform X1 [Dama dama].
ACCESSION   XP_061010281
VERSION     XP_061010281.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154298.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..586
                     /product="nucleus accumbens-associated protein 2 isoform
                     X1"
                     /calculated_mol_wt=62710
     Region          1..131
                     /region_name="BTB_POZ_BTBD14A_NAC2"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in nucleus
                     accumbens-associated protein 2 (NAC-2); cd18289"
                     /db_xref="CDD:349598"
     Region          372..449
                     /region_name="BEN"
                     /note="The BEN domain is found in diverse animal proteins;
                     smart01025"
                     /db_xref="CDD:214981"
     Region          <470..>585
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     CDS             1..586
                     /gene="NACC2"
                     /coded_by="XM_061154298.1:332..2092"
                     /db_xref="GeneID:133064350"
ORIGIN      
        1 msqmlhieip nfgntvlgcl neqrllglyc dvsivvkgqa fkahravlaa sslyfrdlfs
       61 gnsksafelp gtvppacfqq ilsfcytgrl tmaaseqlvv mytagflqiq hivergtdlm
      121 fkvssphcds qttmiedass epqspcnqlq paaappyvvs psvpiplltr vkhealelpl
      181 atgpglapkr pletgprdga avaagpavaa gtaplklprv syygvpslat lipsiqqapy
      241 sqgertspga sslpttdspt syhneedeed deaydtmvee qygqmyikat gsyavqekpe
      301 pvplesrscv lirrdlvalp aslisqigyr chpklysegd pgeklelvag sgvyitrgql
      361 mnchlcagvk hkvllrrlla tffdrntlan scgtgirsst sdpsrkplds rvlnavklyc
      421 qnfapsfkes emnviaadmc tnarrvrkrw lpkiksmlpe gvemyrtvmg ssaasaaldp
      481 efppaaaaqv feqriyaerr geaaaivalr tdavnvdlaa stnpafeage eadgagsviq
      541 evaapeplpa dgqsppqpfe qgsasssrpa tpapgrrpeg pyagpl
//
LOCUS       XP_061010282             586 aa            linear   MAM 02-DEC-2023
DEFINITION  nucleus accumbens-associated protein 2 isoform X1 [Dama dama].
ACCESSION   XP_061010282
VERSION     XP_061010282.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154299.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..586
                     /product="nucleus accumbens-associated protein 2 isoform
                     X1"
                     /calculated_mol_wt=62710
     Region          1..131
                     /region_name="BTB_POZ_BTBD14A_NAC2"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in nucleus
                     accumbens-associated protein 2 (NAC-2); cd18289"
                     /db_xref="CDD:349598"
     Region          372..449
                     /region_name="BEN"
                     /note="The BEN domain is found in diverse animal proteins;
                     smart01025"
                     /db_xref="CDD:214981"
     Region          <470..>585
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     CDS             1..586
                     /gene="NACC2"
                     /coded_by="XM_061154299.1:148..1908"
                     /db_xref="GeneID:133064350"
ORIGIN      
        1 msqmlhieip nfgntvlgcl neqrllglyc dvsivvkgqa fkahravlaa sslyfrdlfs
       61 gnsksafelp gtvppacfqq ilsfcytgrl tmaaseqlvv mytagflqiq hivergtdlm
      121 fkvssphcds qttmiedass epqspcnqlq paaappyvvs psvpiplltr vkhealelpl
      181 atgpglapkr pletgprdga avaagpavaa gtaplklprv syygvpslat lipsiqqapy
      241 sqgertspga sslpttdspt syhneedeed deaydtmvee qygqmyikat gsyavqekpe
      301 pvplesrscv lirrdlvalp aslisqigyr chpklysegd pgeklelvag sgvyitrgql
      361 mnchlcagvk hkvllrrlla tffdrntlan scgtgirsst sdpsrkplds rvlnavklyc
      421 qnfapsfkes emnviaadmc tnarrvrkrw lpkiksmlpe gvemyrtvmg ssaasaaldp
      481 efppaaaaqv feqriyaerr geaaaivalr tdavnvdlaa stnpafeage eadgagsviq
      541 evaapeplpa dgqsppqpfe qgsasssrpa tpapgrrpeg pyagpl
//
LOCUS       XP_061010283             586 aa            linear   MAM 02-DEC-2023
DEFINITION  nucleus accumbens-associated protein 2 isoform X1 [Dama dama].
ACCESSION   XP_061010283
VERSION     XP_061010283.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154300.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..586
                     /product="nucleus accumbens-associated protein 2 isoform
                     X1"
                     /calculated_mol_wt=62710
     Region          1..131
                     /region_name="BTB_POZ_BTBD14A_NAC2"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in nucleus
                     accumbens-associated protein 2 (NAC-2); cd18289"
                     /db_xref="CDD:349598"
     Region          372..449
                     /region_name="BEN"
                     /note="The BEN domain is found in diverse animal proteins;
                     smart01025"
                     /db_xref="CDD:214981"
     Region          <470..>585
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     CDS             1..586
                     /gene="NACC2"
                     /coded_by="XM_061154300.1:159..1919"
                     /db_xref="GeneID:133064350"
ORIGIN      
        1 msqmlhieip nfgntvlgcl neqrllglyc dvsivvkgqa fkahravlaa sslyfrdlfs
       61 gnsksafelp gtvppacfqq ilsfcytgrl tmaaseqlvv mytagflqiq hivergtdlm
      121 fkvssphcds qttmiedass epqspcnqlq paaappyvvs psvpiplltr vkhealelpl
      181 atgpglapkr pletgprdga avaagpavaa gtaplklprv syygvpslat lipsiqqapy
      241 sqgertspga sslpttdspt syhneedeed deaydtmvee qygqmyikat gsyavqekpe
      301 pvplesrscv lirrdlvalp aslisqigyr chpklysegd pgeklelvag sgvyitrgql
      361 mnchlcagvk hkvllrrlla tffdrntlan scgtgirsst sdpsrkplds rvlnavklyc
      421 qnfapsfkes emnviaadmc tnarrvrkrw lpkiksmlpe gvemyrtvmg ssaasaaldp
      481 efppaaaaqv feqriyaerr geaaaivalr tdavnvdlaa stnpafeage eadgagsviq
      541 evaapeplpa dgqsppqpfe qgsasssrpa tpapgrrpeg pyagpl
//
LOCUS       XP_061010285             586 aa            linear   MAM 02-DEC-2023
DEFINITION  nucleus accumbens-associated protein 2 isoform X1 [Dama dama].
ACCESSION   XP_061010285
VERSION     XP_061010285.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154302.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..586
                     /product="nucleus accumbens-associated protein 2 isoform
                     X1"
                     /calculated_mol_wt=62710
     Region          1..131
                     /region_name="BTB_POZ_BTBD14A_NAC2"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in nucleus
                     accumbens-associated protein 2 (NAC-2); cd18289"
                     /db_xref="CDD:349598"
     Region          372..449
                     /region_name="BEN"
                     /note="The BEN domain is found in diverse animal proteins;
                     smart01025"
                     /db_xref="CDD:214981"
     Region          <470..>585
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     CDS             1..586
                     /gene="NACC2"
                     /coded_by="XM_061154302.1:176..1936"
                     /db_xref="GeneID:133064350"
ORIGIN      
        1 msqmlhieip nfgntvlgcl neqrllglyc dvsivvkgqa fkahravlaa sslyfrdlfs
       61 gnsksafelp gtvppacfqq ilsfcytgrl tmaaseqlvv mytagflqiq hivergtdlm
      121 fkvssphcds qttmiedass epqspcnqlq paaappyvvs psvpiplltr vkhealelpl
      181 atgpglapkr pletgprdga avaagpavaa gtaplklprv syygvpslat lipsiqqapy
      241 sqgertspga sslpttdspt syhneedeed deaydtmvee qygqmyikat gsyavqekpe
      301 pvplesrscv lirrdlvalp aslisqigyr chpklysegd pgeklelvag sgvyitrgql
      361 mnchlcagvk hkvllrrlla tffdrntlan scgtgirsst sdpsrkplds rvlnavklyc
      421 qnfapsfkes emnviaadmc tnarrvrkrw lpkiksmlpe gvemyrtvmg ssaasaaldp
      481 efppaaaaqv feqriyaerr geaaaivalr tdavnvdlaa stnpafeage eadgagsviq
      541 evaapeplpa dgqsppqpfe qgsasssrpa tpapgrrpeg pyagpl
//
LOCUS       XP_061010286             472 aa            linear   MAM 02-DEC-2023
DEFINITION  nucleus accumbens-associated protein 2 isoform X2 [Dama dama].
ACCESSION   XP_061010286
VERSION     XP_061010286.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154303.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..472
                     /product="nucleus accumbens-associated protein 2 isoform
                     X2"
                     /calculated_mol_wt=51103
     Region          1..122
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          258..335
                     /region_name="BEN"
                     /note="The BEN domain is found in diverse animal proteins;
                     smart01025"
                     /db_xref="CDD:214981"
     Region          <356..>471
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     CDS             1..472
                     /gene="NACC2"
                     /coded_by="XM_061154303.1:326..1744"
                     /db_xref="GeneID:133064350"
ORIGIN      
        1 msqmlhieip nfgntvlgcl neqrllglyc dvsivvkgqa fkahravlaa sslyfrdlfs
       61 gnsksafelp gtvppacfqq ilsfcytgrl tmaaseqlvv mytagflqiq hivergtdlm
      121 fkqapysqge rtspgasslp ttdsptsyhn eedeeddeay dtmveeqygq myikatgsya
      181 vqekpepvpl esrscvlirr dlvalpasli sqigyrchpk lysegdpgek lelvagsgvy
      241 itrgqlmnch lcagvkhkvl lrrllatffd rntlanscgt girsstsdps rkpldsrvln
      301 avklycqnfa psfkesemnv iaadmctnar rvrkrwlpki ksmlpegvem yrtvmgssaa
      361 saaldpefpp aaaaqvfeqr iyaerrgeaa aivalrtdav nvdlaastnp afeageeadg
      421 agsviqevaa peplpadgqs ppqpfeqgsa sssrpatpap grrpegpyag pl
//
LOCUS       XP_061010287             401 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin-associated domain-containing protein 1 [Dama dama].
ACCESSION   XP_061010287
VERSION     XP_061010287.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154304.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..401
                     /product="ubiquitin-associated domain-containing protein
                     1"
                     /calculated_mol_wt=44792
     Region          9..95
                     /region_name="Ubl_KPC2"
                     /note="ubiquitin-like (Ubl) domain found in Kip1
                     ubiquitination-promoting complex protein 2 (KPC2) and
                     similar proteins; cd17066"
                     /db_xref="CDD:340586"
     Region          195..232
                     /region_name="UBA_like_SF"
                     /note="UBA domain-like superfamily; cl21463"
                     /db_xref="CDD:473871"
     Region          285..323
                     /region_name="UBA2_KPC2"
                     /note="UBA2 domain found in Kip1 ubiquitination-promoting
                     complex protein 2 (KPC2) and similar proteins; cd14304"
                     /db_xref="CDD:270489"
     Region          349..388
                     /region_name="STI1"
                     /note="Heat shock chaperonin-binding motif; smart00727"
                     /db_xref="CDD:128966"
     CDS             1..401
                     /gene="UBAC1"
                     /coded_by="XM_061154304.1:93..1298"
                     /db_xref="GeneID:133064351"
ORIGIN      
        1 mfvqeekifa gkvlrlhvca sdgaewleea tegtsveklk erclkhcapg sledpksvth
       61 hklihaaser vlsdaktlle ehvqdedvil lirkrapapl pkmaevsaee kkkqeqkapd
      121 rdaifratas lpshnmdrav vqtsardfqt elrrilvsli evaqkllaln pdavelfkka
      181 namldedede rvdeaalrql temgfpetra akalrlnhms vpqamewlie haddptidtp
      241 lpgpasqgea gaeatpaagt seeeeardel teifkkirrk refrpdarav islmemgfde
      301 kevidalrvn nnqqnaacew llgdrrpspe eldkgidpes plfqaildnp vvqlgltnpk
      361 tllafedmle nplnstqwmn dpetgpvmlq isrifqtlnr a
//
LOCUS       XP_061010288            1571 aa            linear   MAM 02-DEC-2023
DEFINITION  calmodulin-regulated spectrin-associated protein 1 isoform X1 [Dama
            dama].
ACCESSION   XP_061010288
VERSION     XP_061010288.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154305.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1571
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1571
                     /product="calmodulin-regulated spectrin-associated protein
                     1 isoform X1"
                     /calculated_mol_wt=172352
     Region          229..312
                     /region_name="CAMSAP_CH"
                     /note="CAMSAP CH domain; pfam11971"
                     /db_xref="CDD:432229"
     Region          847..905
                     /region_name="CAMSAP_CC1"
                     /note="Spectrin-binding region of Ca2+-Calmodulin;
                     pfam17095"
                     /db_xref="CDD:465344"
     Region          <1244..1334
                     /region_name="ARGLU"
                     /note="Arginine and glutamate-rich 1; pfam15346"
                     /db_xref="CDD:405931"
     Region          1432..1560
                     /region_name="CAMSAP_CKK"
                     /note="Microtubule-binding calmodulin-regulated
                     spectrin-associated; smart01051"
                     /db_xref="CDD:198119"
     CDS             1..1571
                     /gene="CAMSAP1"
                     /coded_by="XM_061154305.1:62..4777"
                     /db_xref="GeneID:133064352"
ORIGIN      
        1 mvdaggcpag egwrrmeaap dgavdivpld rydparakia anlqwicaka ygrddipedl
       61 rdpfyidqye qehikppvik lllsselycr vcslilkgdq vaalqghqsv iqalsrkgiy
      121 vmesddtpvt epdlshapik msahmamvda lmmaytvemi siekvvasvk rfstfsaske
      181 lpydledamv fwvnkvnlkm reitekevkl kqqllespah qkvryrrehl sarqpphfpl
      241 ledlmrdgsh gaallavvhy ycpeqmkldd iclkevtsma dslynirllr efsneylnkc
      301 fyltledmly aplvlkpnvm vfiaelfwwf envkpdfvqp rdvqelkdak svshpkssrp
      361 pvpisnatkr sflggpaaas padpqppapp hhlqlgepea lgkgasafsp shpllplrqk
      421 qqktvqgedp pdqrhrsnsl tradsqprga aiawtekknr pasqpapfal hhtascdmdp
      481 gggdsvslar siskdslass vihltpqnqp qpaalrtdgr sllsnvdied edeellaivr
      541 tdvarqggdp glmasarspq rladtfeskp dsffleplmp avlrpakekq vvtkedecge
      601 grpraftsrr sgdghqplgr kkvpsshvar dlnrtftpia cseisagfda vpaevgpqva
      661 gdthggplag sgfdpssqgq stdgfflhvg radkdaegrl ymscarspga lgpdtwavrq
      721 dsdsdvadld eaeqdfaged hptaragygg eeesaklqed lkvkehedkd dtsgrsspcl
      781 stvsqissvs masgsvkmts faerklqrln scetksstss sqkttpdase scpaplttwk
      841 qrreqspsrp ggdhasllas elvqlhmqle ekrraieaqk kkvealsarq rlqlgkaafl
      901 hvvkkgradt apqplkagpl agehaqhngd dflgkeegrg allgspdvdg eglaliqphk
      961 ardptglpel ergkalsavl ledtegvdvg ecdlsiekln etistlqqai lrisqqqeql
     1021 llksptvpsp gprngsqdpk akaaihfgep psptaltshr kpprlgqgrn arsgrpaelk
     1081 vpkerqqgss rsktptpgle ttphlrsfpp rtppepgwdg lgepgseaae kcvfdsyrlh
     1141 desnqrmlal sssrdtnils eqggfregle gsakevalst ltvpgkenvp ldepprskas
     1201 lievdlsdlk apdedgeteg qdssvdlgse gdqkpgvgff fkdeqkadde lakkraafll
     1261 kqqrkaeear vrrqqleaev elkrdearrk aeedrirkee ekarrelikq eylrrkqqqi
     1321 leeqglgkpk arprkprpks vhreepgsdl gpksasppdn lsraqsgssl slasaattep
     1381 esvhsggtps qrrvesleal pvlsrnpsrs tdrdwetasa asslasvaey tgpklfkeps
     1441 sksnkpiihn aishcclagk vnephknsil eelekcdanh yiilfrdagc qfralycyyp
     1501 dteeickltg tgpksiakkm idklykyssd rkqfslipak tmsvsvdalt ihnhlwqpkr
     1561 psapkktqtr k
//
LOCUS       XP_061010289            1570 aa            linear   MAM 02-DEC-2023
DEFINITION  calmodulin-regulated spectrin-associated protein 1 isoform X2 [Dama
            dama].
ACCESSION   XP_061010289
VERSION     XP_061010289.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154306.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1570
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1570
                     /product="calmodulin-regulated spectrin-associated protein
                     1 isoform X2"
                     /calculated_mol_wt=172196
     Region          229..312
                     /region_name="CAMSAP_CH"
                     /note="CAMSAP CH domain; pfam11971"
                     /db_xref="CDD:432229"
     Region          847..905
                     /region_name="CAMSAP_CC1"
                     /note="Spectrin-binding region of Ca2+-Calmodulin;
                     pfam17095"
                     /db_xref="CDD:465344"
     Region          <1244..1334
                     /region_name="ARGLU"
                     /note="Arginine and glutamate-rich 1; pfam15346"
                     /db_xref="CDD:405931"
     Region          1431..1559
                     /region_name="CAMSAP_CKK"
                     /note="Microtubule-binding calmodulin-regulated
                     spectrin-associated; smart01051"
                     /db_xref="CDD:198119"
     CDS             1..1570
                     /gene="CAMSAP1"
                     /coded_by="XM_061154306.1:62..4774"
                     /db_xref="GeneID:133064352"
ORIGIN      
        1 mvdaggcpag egwrrmeaap dgavdivpld rydparakia anlqwicaka ygrddipedl
       61 rdpfyidqye qehikppvik lllsselycr vcslilkgdq vaalqghqsv iqalsrkgiy
      121 vmesddtpvt epdlshapik msahmamvda lmmaytvemi siekvvasvk rfstfsaske
      181 lpydledamv fwvnkvnlkm reitekevkl kqqllespah qkvryrrehl sarqpphfpl
      241 ledlmrdgsh gaallavvhy ycpeqmkldd iclkevtsma dslynirllr efsneylnkc
      301 fyltledmly aplvlkpnvm vfiaelfwwf envkpdfvqp rdvqelkdak svshpkssrp
      361 pvpisnatkr sflggpaaas padpqppapp hhlqlgepea lgkgasafsp shpllplrqk
      421 qqktvqgedp pdqrhrsnsl tradsqprga aiawtekknr pasqpapfal hhtascdmdp
      481 gggdsvslar siskdslass vihltpqnqp qpaalrtdgr sllsnvdied edeellaivr
      541 tdvarqggdp glmasarspq rladtfeskp dsffleplmp avlrpakekq vvtkedecge
      601 grpraftsrr sgdghqplgr kkvpsshvar dlnrtftpia cseisagfda vpaevgpqva
      661 gdthggplag sgfdpssqgq stdgfflhvg radkdaegrl ymscarspga lgpdtwavrq
      721 dsdsdvadld eaeqdfaged hptaragygg eeesaklqed lkvkehedkd dtsgrsspcl
      781 stvsqissvs masgsvkmts faerklqrln scetksstss sqkttpdase scpaplttwk
      841 qrreqspsrp ggdhasllas elvqlhmqle ekrraieaqk kkvealsarq rlqlgkaafl
      901 hvvkkgradt apqplkagpl agehaqhngd dflgkeegrg allgspdvdg eglaliqphk
      961 ardptglpel ergkalsavl ledtegvdvg ecdlsiekln etistlqqai lrisqqqeql
     1021 llksptvpsp gprngsqdpk akaaihfgep psptaltshr kpprlgqgrn arsgrpaelk
     1081 vpkerqqgss rsktptpgle ttphlrsfpp rtppepgwdg lgepgseaae kcvfdsyrlh
     1141 desnqrmlal sssrdtnils eqggfregle gsakevalst ltvpgkenvp ldepprskas
     1201 lievdlsdlk apdedgeteg qdssvdlgse gdqkpgvgff fkdeqkadde lakkraafll
     1261 kqqrkaeear vrrqqleaev elkrdearrk aeedrirkee ekarrelikq eylrrkqqqi
     1321 leeqglgkpk arprkprpks vhreepgsdl gpksasppdn lsraqsgssl slasaattep
     1381 esvhsggtps qrveslealp vlsrnpsrst drdwetasaa sslasvaeyt gpklfkepss
     1441 ksnkpiihna ishcclagkv nephknsile elekcdanhy iilfrdagcq fralycyypd
     1501 teeickltgt gpksiakkmi dklykyssdr kqfslipakt msvsvdalti hnhlwqpkrp
     1561 sapkktqtrk
//
LOCUS       XP_061010290            1327 aa            linear   MAM 02-DEC-2023
DEFINITION  calmodulin-regulated spectrin-associated protein 1 isoform X3 [Dama
            dama].
ACCESSION   XP_061010290
VERSION     XP_061010290.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154307.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1327
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1327
                     /product="calmodulin-regulated spectrin-associated protein
                     1 isoform X3"
                     /calculated_mol_wt=144733
     Region          1..68
                     /region_name="CAMSAP_CH"
                     /note="CAMSAP CH domain; pfam11971"
                     /db_xref="CDD:432229"
     Region          603..661
                     /region_name="CAMSAP_CC1"
                     /note="Spectrin-binding region of Ca2+-Calmodulin;
                     pfam17095"
                     /db_xref="CDD:465344"
     Region          <1000..1090
                     /region_name="ARGLU"
                     /note="Arginine and glutamate-rich 1; pfam15346"
                     /db_xref="CDD:405931"
     Region          1188..1316
                     /region_name="CAMSAP_CKK"
                     /note="Microtubule-binding calmodulin-regulated
                     spectrin-associated; smart01051"
                     /db_xref="CDD:198119"
     CDS             1..1327
                     /gene="CAMSAP1"
                     /coded_by="XM_061154307.1:85..4068"
                     /db_xref="GeneID:133064352"
ORIGIN      
        1 mrdgshgaal lavvhyycpe qmklddiclk evtsmadsly nirllrefsn eylnkcfylt
       61 ledmlyaplv lkpnvmvfia elfwwfenvk pdfvqprdvq elkdaksvsh pkssrppvpi
      121 snatkrsflg gpaaaspadp qppapphhlq lgepealgkg asafspshpl lplrqkqqkt
      181 vqgedppdqr hrsnsltrad sqprgaaiaw tekknrpasq papfalhhta scdmdpgggd
      241 svslarsisk dslassvihl tpqnqpqpaa lrtdgrslls nvdiededee llaivrtdva
      301 rqggdpglma sarspqrlad tfeskpdsff leplmpavlr pakekqvvtk edecgegrpr
      361 aftsrrsgdg hqplgrkkvp sshvardlnr tftpiacsei sagfdavpae vgpqvagdth
      421 ggplagsgfd pssqgqstdg fflhvgradk daegrlymsc arspgalgpd twavrqdsds
      481 dvadldeaeq dfagedhpta ragyggeees aklqedlkvk ehedkddtsg rsspclstvs
      541 qissvsmasg svkmtsfaer klqrlnscet ksstsssqkt tpdasescpa plttwkqrre
      601 qspsrpggdh asllaselvq lhmqleekrr aieaqkkkve alsarqrlql gkaaflhvvk
      661 kgradtapqp lkagplageh aqhngddflg keegrgallg spdvdgegla liqphkardp
      721 tglpelergk alsavlledt egvdvgecdl sieklnetis tlqqailris qqqeqlllks
      781 ptvpspgprn gsqdpkakaa ihfgeppspt altshrkppr lgqgrnarsg rpaelkvpke
      841 rqqgssrskt ptpglettph lrsfpprtpp epgwdglgep gseaaekcvf dsyrlhdesn
      901 qrmlalsssr dtnilseqgg freglegsak evalstltvp gkenvpldep prskasliev
      961 dlsdlkapde dgetegqdss vdlgsegdqk pgvgfffkde qkaddelakk raafllkqqr
     1021 kaeearvrrq qleaevelkr dearrkaeed rirkeeekar relikqeylr rkqqqileeq
     1081 glgkpkarpr kprpksvhre epgsdlgpks asppdnlsra qsgsslslas aattepesvh
     1141 sggtpsqrrv eslealpvls rnpsrstdrd wetasaassl asvaeytgpk lfkepssksn
     1201 kpiihnaish cclagkvnep hknsileele kcdanhyiil frdagcqfra lycyypdtee
     1261 ickltgtgpk siakkmidkl ykyssdrkqf slipaktmsv svdaltihnh lwqpkrpsap
     1321 kktqtrk
//
LOCUS       XP_061010291            1202 aa            linear   MAM 02-DEC-2023
DEFINITION  potassium channel subfamily T member 1 isoform X1 [Dama dama].
ACCESSION   XP_061010291
VERSION     XP_061010291.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154308.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1202
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1202
                     /product="potassium channel subfamily T member 1 isoform
                     X1"
                     /calculated_mol_wt=136272
     Region          109..289
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          224..297
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     Region          451..545
                     /region_name="BK_channel_a"
                     /note="Calcium-activated BK potassium channel alpha
                     subunit; pfam03493"
                     /db_xref="CDD:460947"
     CDS             1..1202
                     /gene="KCNT1"
                     /coded_by="XM_061154308.1:1..3609"
                     /db_xref="GeneID:133064354"
ORIGIN      
        1 msdldsevlp lppryrfrdl llgdqpfqnd drvqvefyvn entfkerlkl ffiknqrssl
       61 rirlfnfslk lltcllyivr vllddpalgi gcwgcpkqny tfnesssein wapilwverk
      121 valwavqviv aiisfletml liylsykgni weqifrvsfi lemintlpfi itifwpplrn
      181 lfipvflncw lakhalenmi ndfhrailrs qsamfnqvli lfctllclvf tgtcgiqhle
      241 ragdnlsllt sfyfcivtfs tvgygdvtpk iwpsqllvvi micvalvvlp lqfeelvylw
      301 merqksggny srhraqtekh vilcvsslki dllmdflnef yahprlqdyy vvilcptemd
      361 iqvrrvlqip lwsqrviylq gsalkdqdlm rakmdngeac filssrnevd rtaadhqtil
      421 rawavkdfap ncplyvqilk penkfhvkfa ehvvceeeck yamlalncic patstlitll
      481 vhtsrgqegq dspeqwqrmy grcsgnevyh vrmgdskffr eyegksftya afhahkkygv
      541 clmglkredn ksillnpgpr hilaasdtcf yinitkeens afifkqeekq krkgfagqgl
      601 yegssrlpvh siiasmgtva mdlqntecrp aqsggggggs klalptengs gsrrpsiapv
      661 levadsstll pcdllsdqse demtpsdeeg lsvveyvkgy ppnspyigss ptlchllpvk
      721 apfcclrldk gckhnsyeda kaygfknkli ivsaetagng lynfivplra yyrprrelnp
      781 ivllldnkpd hhfleaiccf pmvyymegsv dnldsllqcg iiyadnlvvv dkestmsaee
      841 dymadaktiv nvqtmfrlfp slsittelth psnmrfmqfr akdsyslals klekrereng
      901 snlafmfrlp faagrvfsis mldtllyqsf vkdymipitr lllgldttpg sgylcamkis
      961 eddlwirtyg rlfqklcsss aeipigiyrt qchvfptepp dlraqsqvsv svedcedtre
     1021 akgpwgarvg tgsgsahgrh taggdpaehp llrrkslpwa rrlsrkgsrh agkaaaewis
     1081 qqrlslyrrs erqelselvk nrmkhlglpt sgyedvanlt asdvmnrvnl gylqdemndh
     1141 qntlsyvlin pppdtrlepn divylirsdp lahvasssqs rksscsnkla scnpetrdet
     1201 ql
//
LOCUS       XP_061010292            1183 aa            linear   MAM 02-DEC-2023
DEFINITION  potassium channel subfamily T member 1 isoform X2 [Dama dama].
ACCESSION   XP_061010292
VERSION     XP_061010292.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154309.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1183
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1183
                     /product="potassium channel subfamily T member 1 isoform
                     X2"
                     /calculated_mol_wt=134100
     Region          90..270
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          205..278
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     Region          432..526
                     /region_name="BK_channel_a"
                     /note="Calcium-activated BK potassium channel alpha
                     subunit; pfam03493"
                     /db_xref="CDD:460947"
     CDS             1..1183
                     /gene="KCNT1"
                     /coded_by="XM_061154309.1:97..3648"
                     /db_xref="GeneID:133064354"
ORIGIN      
        1 msraewsley gyrvqvefyv nentfkerlk lffiknqrss lrirlfnfsl klltcllyiv
       61 rvllddpalg igcwgcpkqn ytfnesssei nwapilwver kvalwavqvi vaiisfletm
      121 lliylsykgn iweqifrvsf ilemintlpf iitifwpplr nlfipvflnc wlakhalenm
      181 indfhrailr sqsamfnqvl ilfctllclv ftgtcgiqhl eragdnlsll tsfyfcivtf
      241 stvgygdvtp kiwpsqllvv imicvalvvl plqfeelvyl wmerqksggn ysrhraqtek
      301 hvilcvsslk idllmdflne fyahprlqdy yvvilcptem diqvrrvlqi plwsqrviyl
      361 qgsalkdqdl mrakmdngea cfilssrnev drtaadhqti lrawavkdfa pncplyvqil
      421 kpenkfhvkf aehvvceeec kyamlalnci cpatstlitl lvhtsrgqeg qdspeqwqrm
      481 ygrcsgnevy hvrmgdskff reyegksfty aafhahkkyg vclmglkred nksillnpgp
      541 rhilaasdtc fyinitkeen safifkqeek qkrkgfagqg lyegssrlpv hsiiasmgtv
      601 amdlqntecr paqsgggggg sklalpteng sgsrrpsiap vlevadsstl lpcdllsdqs
      661 edemtpsdee glsvveyvkg yppnspyigs sptlchllpv kapfcclrld kgckhnsyed
      721 akaygfknkl iivsaetagn glynfivplr ayyrprreln pivllldnkp dhhfleaicc
      781 fpmvyymegs vdnldsllqc giiyadnlvv vdkestmsae edymadakti vnvqtmfrlf
      841 pslsittelt hpsnmrfmqf rakdsyslal sklekreren gsnlafmfrl pfaagrvfsi
      901 smldtllyqs fvkdymipit rlllgldttp gsgylcamki seddlwirty grlfqklcss
      961 saeipigiyr tqchvfptep pdlraqsqvs vsvedcedtr eakgpwgarv gtgsgsahgr
     1021 htaggdpaeh pllrrkslpw arrlsrkgsr hagkaaaewi sqqrlslyrr serqelselv
     1081 knrmkhlglp tsgyedvanl tasdvmnrvn lgylqdemnd hqntlsyvli npppdtrlep
     1141 ndivylirsd plahvasssq srksscsnkl ascnpetrde tql
//
LOCUS       XP_061010294            1181 aa            linear   MAM 02-DEC-2023
DEFINITION  potassium channel subfamily T member 1 isoform X3 [Dama dama].
ACCESSION   XP_061010294
VERSION     XP_061010294.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154311.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1181
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1181
                     /product="potassium channel subfamily T member 1 isoform
                     X3"
                     /calculated_mol_wt=133781
     Region          88..268
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          203..276
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     Region          430..524
                     /region_name="BK_channel_a"
                     /note="Calcium-activated BK potassium channel alpha
                     subunit; pfam03493"
                     /db_xref="CDD:460947"
     CDS             1..1181
                     /gene="KCNT1"
                     /coded_by="XM_061154311.1:88..3633"
                     /db_xref="GeneID:133064354"
ORIGIN      
        1 msraewsley gvqvefyvne ntfkerlklf fiknqrsslr irlfnfslkl ltcllyivrv
       61 llddpalgig cwgcpkqnyt fnessseinw apilwverkv alwavqviva iisfletmll
      121 iylsykgniw eqifrvsfil emintlpfii tifwpplrnl fipvflncwl akhalenmin
      181 dfhrailrsq samfnqvlil fctllclvft gtcgiqhler agdnlsllts fyfcivtfst
      241 vgygdvtpki wpsqllvvim icvalvvlpl qfeelvylwm erqksggnys rhraqtekhv
      301 ilcvsslkid llmdflnefy ahprlqdyyv vilcptemdi qvrrvlqipl wsqrviylqg
      361 salkdqdlmr akmdngeacf ilssrnevdr taadhqtilr awavkdfapn cplyvqilkp
      421 enkfhvkfae hvvceeecky amlalncicp atstlitllv htsrgqegqd speqwqrmyg
      481 rcsgnevyhv rmgdskffre yegksftyaa fhahkkygvc lmglkrednk sillnpgprh
      541 ilaasdtcfy initkeensa fifkqeekqk rkgfagqgly egssrlpvhs iiasmgtvam
      601 dlqntecrpa qsggggggsk lalptengsg srrpsiapvl evadsstllp cdllsdqsed
      661 emtpsdeegl svveyvkgyp pnspyigssp tlchllpvka pfcclrldkg ckhnsyedak
      721 aygfknklii vsaetagngl ynfivplray yrprrelnpi vllldnkpdh hfleaiccfp
      781 mvyymegsvd nldsllqcgi iyadnlvvvd kestmsaeed ymadaktivn vqtmfrlfps
      841 lsittelthp snmrfmqfra kdsyslalsk lekrerengs nlafmfrlpf aagrvfsism
      901 ldtllyqsfv kdymipitrl llgldttpgs gylcamkise ddlwirtygr lfqklcsssa
      961 eipigiyrtq chvfpteppd lraqsqvsvs vedcedtrea kgpwgarvgt gsgsahgrht
     1021 aggdpaehpl lrrkslpwar rlsrkgsrha gkaaaewisq qrlslyrrse rqelselvkn
     1081 rmkhlglpts gyedvanlta sdvmnrvnlg ylqdemndhq ntlsyvlinp ppdtrlepnd
     1141 ivylirsdpl ahvasssqsr ksscsnklas cnpetrdetq l
//
LOCUS       XP_061010295            1179 aa            linear   MAM 02-DEC-2023
DEFINITION  potassium channel subfamily T member 1 isoform X4 [Dama dama].
ACCESSION   XP_061010295
VERSION     XP_061010295.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154312.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1179
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1179
                     /product="potassium channel subfamily T member 1 isoform
                     X4"
                     /calculated_mol_wt=133561
     Region          86..266
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          201..274
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     Region          428..522
                     /region_name="BK_channel_a"
                     /note="Calcium-activated BK potassium channel alpha
                     subunit; pfam03493"
                     /db_xref="CDD:460947"
     CDS             1..1179
                     /gene="KCNT1"
                     /coded_by="XM_061154312.1:94..3633"
                     /db_xref="GeneID:133064354"
ORIGIN      
        1 msraewslev qvefyvnent fkerlklffi knqrsslrir lfnfslkllt cllyivrvll
       61 ddpalgigcw gcpkqnytfn essseinwap ilwverkval wavqvivaii sfletmlliy
      121 lsykgniweq ifrvsfilem intlpfiiti fwpplrnlfi pvflncwlak halenmindf
      181 hrailrsqsa mfnqvlilfc tllclvftgt cgiqhlerag dnlslltsfy fcivtfstvg
      241 ygdvtpkiwp sqllvvimic valvvlplqf eelvylwmer qksggnysrh raqtekhvil
      301 cvsslkidll mdflnefyah prlqdyyvvi lcptemdiqv rrvlqiplws qrviylqgsa
      361 lkdqdlmrak mdngeacfil ssrnevdrta adhqtilraw avkdfapncp lyvqilkpen
      421 kfhvkfaehv vceeeckyam lalncicpat stlitllvht srgqegqdsp eqwqrmygrc
      481 sgnevyhvrm gdskffreye gksftyaafh ahkkygvclm glkrednksi llnpgprhil
      541 aasdtcfyin itkeensafi fkqeekqkrk gfagqglyeg ssrlpvhsii asmgtvamdl
      601 qntecrpaqs ggggggskla lptengsgsr rpsiapvlev adsstllpcd llsdqsedem
      661 tpsdeeglsv veyvkgyppn spyigssptl chllpvkapf cclrldkgck hnsyedakay
      721 gfknkliivs aetagnglyn fivplrayyr prrelnpivl lldnkpdhhf leaiccfpmv
      781 yymegsvdnl dsllqcgiiy adnlvvvdke stmsaeedym adaktivnvq tmfrlfpsls
      841 ittelthpsn mrfmqfrakd syslalskle krerengsnl afmfrlpfaa grvfsismld
      901 tllyqsfvkd ymipitrlll gldttpgsgy lcamkisedd lwirtygrlf qklcsssaei
      961 pigiyrtqch vfpteppdlr aqsqvsvsve dcedtreakg pwgarvgtgs gsahgrhtag
     1021 gdpaehpllr rkslpwarrl srkgsrhagk aaaewisqqr lslyrrserq elselvknrm
     1081 khlglptsgy edvanltasd vmnrvnlgyl qdemndhqnt lsyvlinppp dtrlepndiv
     1141 ylirsdplah vasssqsrks scsnklascn petrdetql
//
LOCUS       XP_061010296            1176 aa            linear   MAM 02-DEC-2023
DEFINITION  potassium channel subfamily T member 1 isoform X5 [Dama dama].
ACCESSION   XP_061010296
VERSION     XP_061010296.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154313.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1176
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1176
                     /product="potassium channel subfamily T member 1 isoform
                     X5"
                     /calculated_mol_wt=133229
     Region          83..263
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          198..271
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     Region          425..519
                     /region_name="BK_channel_a"
                     /note="Calcium-activated BK potassium channel alpha
                     subunit; pfam03493"
                     /db_xref="CDD:460947"
     CDS             1..1176
                     /gene="KCNT1"
                     /coded_by="XM_061154313.1:38..3568"
                     /db_xref="GeneID:133064354"
ORIGIN      
        1 mesrvrvqve fyvnentfke rlklffiknq rsslrirlfn fslklltcll yivrvllddp
       61 algigcwgcp kqnytfness seinwapilw verkvalwav qvivaiisfl etmlliylsy
      121 kgniweqifr vsfilemint lpfiitifwp plrnlfipvf lncwlakhal enmindfhra
      181 ilrsqsamfn qvlilfctll clvftgtcgi qhleragdnl slltsfyfci vtfstvgygd
      241 vtpkiwpsql lvvimicval vvlplqfeel vylwmerqks ggnysrhraq tekhvilcvs
      301 slkidllmdf lnefyahprl qdyyvvilcp temdiqvrrv lqiplwsqrv iylqgsalkd
      361 qdlmrakmdn geacfilssr nevdrtaadh qtilrawavk dfapncplyv qilkpenkfh
      421 vkfaehvvce eeckyamlal ncicpatstl itllvhtsrg qegqdspeqw qrmygrcsgn
      481 evyhvrmgds kffreyegks ftyaafhahk kygvclmglk rednksilln pgprhilaas
      541 dtcfyinitk eensafifkq eekqkrkgfa gqglyegssr lpvhsiiasm gtvamdlqnt
      601 ecrpaqsggg gggsklalpt engsgsrrps iapvlevads stllpcdlls dqsedemtps
      661 deeglsvvey vkgyppnspy igssptlchl lpvkapfccl rldkgckhns yedakaygfk
      721 nkliivsaet agnglynfiv plrayyrprr elnpivllld nkpdhhflea iccfpmvyym
      781 egsvdnldsl lqcgiiyadn lvvvdkestm saeedymada ktivnvqtmf rlfpslsitt
      841 elthpsnmrf mqfrakdsys lalsklekre rengsnlafm frlpfaagrv fsismldtll
      901 yqsfvkdymi pitrlllgld ttpgsgylca mkiseddlwi rtygrlfqkl csssaeipig
      961 iyrtqchvfp teppdlraqs qvsvsvedce dtreakgpwg arvgtgsgsa hgrhtaggdp
     1021 aehpllrrks lpwarrlsrk gsrhagkaaa ewisqqrlsl yrrserqels elvknrmkhl
     1081 glptsgyedv anltasdvmn rvnlgylqde mndhqntlsy vlinpppdtr lepndivyli
     1141 rsdplahvas ssqsrksscs nklascnpet rdetql
//
LOCUS       XP_061010297             359 aa            linear   MAM 02-DEC-2023
DEFINITION  globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X1
            [Dama dama].
ACCESSION   XP_061010297
VERSION     XP_061010297.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154314.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..359
                     /product="globoside
                     alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X1"
                     /calculated_mol_wt=40977
     Region          71..359
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
     Site            order(127..129,133,191,195,218..220,352,354)
                     /site_type="active"
                     /note="substrate binding site [active]"
                     /db_xref="CDD:133008"
     Site            order(127..129,133,218..220,240..243,252,271,307,310)
                     /site_type="active"
                     /db_xref="CDD:133008"
     CDS             1..359
                     /gene="GBGT1"
                     /coded_by="XM_061154314.1:225..1304"
                     /db_xref="GeneID:133064355"
ORIGIN      
        1 megaqarmpp pamhcprlal glgfclllgi tlcslwvyve nwllvsyipy ylpcpeifnm
       61 klqyeeepsq pvaqsqypqp klleqkptel ltltpwlapi vsegtfnael lhhiyqplnl
      121 tigltafavg nrytrfvqhf lesaeqffmr gyrvryyift hdpqaiprvp lgpdrhlsvv
      181 pvpgpslwee astrrmevis mhiaerahre vdylfclnvd tafrnpwgpe tlgdlvaaih
      241 pgyftvprhq fpyerrpvst afvadgegdf yyggavfggr varvyeftrg chmgiladka
      301 ngitaawqee shlnrrflsh kpskvlspey lwddrqpqpp slklirfstl nkdtawlqs
//
LOCUS       XP_061010298             358 aa            linear   MAM 02-DEC-2023
DEFINITION  globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X2
            [Dama dama].
ACCESSION   XP_061010298
VERSION     XP_061010298.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154315.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..358
                     /product="globoside
                     alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X2"
                     /calculated_mol_wt=40835
     Region          71..358
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
     Site            order(127..129,132,190,194,217..219,351,353)
                     /site_type="active"
                     /note="substrate binding site [active]"
                     /db_xref="CDD:133008"
     Site            order(127..129,132,217..219,239..242,251,270,306,309)
                     /site_type="active"
                     /db_xref="CDD:133008"
     CDS             1..358
                     /gene="GBGT1"
                     /coded_by="XM_061154315.1:225..1301"
                     /db_xref="GeneID:133064355"
ORIGIN      
        1 megaqarmpp pamhcprlal glgfclllgi tlcslwvyve nwllvsyipy ylpcpeifnm
       61 klqyeeepsq pvaqsqypqp klleqkptel ltltpwlapi vsegtfnael lhhiyqplnl
      121 tigltafavg kytrfvqhfl esaeqffmrg yrvryyifth dpqaiprvpl gpdrhlsvvp
      181 vpgpslweea strrmevism hiaerahrev dylfclnvdt afrnpwgpet lgdlvaaihp
      241 gyftvprhqf pyerrpvsta fvadgegdfy yggavfggrv arvyeftrgc hmgiladkan
      301 gitaawqees hlnrrflshk pskvlspeyl wddrqpqpps lklirfstln kdtawlqs
//
LOCUS       XP_061010299             352 aa            linear   MAM 02-DEC-2023
DEFINITION  globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X3
            [Dama dama].
ACCESSION   XP_061010299
VERSION     XP_061010299.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154316.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..352
                     /product="globoside
                     alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X3"
                     /calculated_mol_wt=40233
     Region          64..352
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
     Site            order(120..122,126,184,188,211..213,345,347)
                     /site_type="active"
                     /note="substrate binding site [active]"
                     /db_xref="CDD:133008"
     Site            order(120..122,126,211..213,233..236,245,264,300,303)
                     /site_type="active"
                     /db_xref="CDD:133008"
     CDS             1..352
                     /gene="GBGT1"
                     /coded_by="XM_061154316.1:149..1207"
                     /db_xref="GeneID:133064355"
ORIGIN      
        1 mpppamhcpr lalglgfcll lgitlcslwv yvenwllvsy ipyylpcpei fnmklqyeee
       61 psqpvaqsqy pqpklleqkp telltltpwl apivsegtfn aellhhiyqp lnltigltaf
      121 avgnrytrfv qhflesaeqf fmrgyrvryy ifthdpqaip rvplgpdrhl svvpvpgpsl
      181 weeastrrme vismhiaera hrevdylfcl nvdtafrnpw gpetlgdlva aihpgyftvp
      241 rhqfpyerrp vstafvadge gdfyyggavf ggrvarvyef trgchmgila dkangitaaw
      301 qeeshlnrrf lshkpskvls peylwddrqp qppslklirf stlnkdtawl qs
//
LOCUS       XP_061010300             352 aa            linear   MAM 02-DEC-2023
DEFINITION  globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X3
            [Dama dama].
ACCESSION   XP_061010300
VERSION     XP_061010300.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154317.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..352
                     /product="globoside
                     alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X3"
                     /calculated_mol_wt=40233
     Region          64..352
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
     Site            order(120..122,126,184,188,211..213,345,347)
                     /site_type="active"
                     /note="substrate binding site [active]"
                     /db_xref="CDD:133008"
     Site            order(120..122,126,211..213,233..236,245,264,300,303)
                     /site_type="active"
                     /db_xref="CDD:133008"
     CDS             1..352
                     /gene="GBGT1"
                     /coded_by="XM_061154317.1:232..1290"
                     /db_xref="GeneID:133064355"
ORIGIN      
        1 mpppamhcpr lalglgfcll lgitlcslwv yvenwllvsy ipyylpcpei fnmklqyeee
       61 psqpvaqsqy pqpklleqkp telltltpwl apivsegtfn aellhhiyqp lnltigltaf
      121 avgnrytrfv qhflesaeqf fmrgyrvryy ifthdpqaip rvplgpdrhl svvpvpgpsl
      181 weeastrrme vismhiaera hrevdylfcl nvdtafrnpw gpetlgdlva aihpgyftvp
      241 rhqfpyerrp vstafvadge gdfyyggavf ggrvarvyef trgchmgila dkangitaaw
      301 qeeshlnrrf lshkpskvls peylwddrqp qppslklirf stlnkdtawl qs
//
LOCUS       XP_061010301             300 aa            linear   MAM 02-DEC-2023
DEFINITION  globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X4
            [Dama dama].
ACCESSION   XP_061010301
VERSION     XP_061010301.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154318.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..300
                     /product="globoside
                     alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X4"
                     /calculated_mol_wt=34309
     Region          12..300
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
     Site            order(68..70,74,132,136,159..161,293,295)
                     /site_type="active"
                     /note="substrate binding site [active]"
                     /db_xref="CDD:133008"
     Site            order(68..70,74,159..161,181..184,193,212,248,251)
                     /site_type="active"
                     /db_xref="CDD:133008"
     CDS             1..300
                     /gene="GBGT1"
                     /coded_by="XM_061154318.1:158..1060"
                     /db_xref="GeneID:133064355"
ORIGIN      
        1 mklqyeeeps qpvaqsqypq pklleqkpte lltltpwlap ivsegtfnae llhhiyqpln
       61 ltigltafav gnrytrfvqh flesaeqffm rgyrvryyif thdpqaiprv plgpdrhlsv
      121 vpvpgpslwe eastrrmevi smhiaerahr evdylfclnv dtafrnpwgp etlgdlvaai
      181 hpgyftvprh qfpyerrpvs tafvadgegd fyyggavfgg rvarvyeftr gchmgiladk
      241 angitaawqe eshlnrrfls hkpskvlspe ylwddrqpqp pslklirfst lnkdtawlqs
//
LOCUS       XP_061010302             879 aa            linear   MAM 02-DEC-2023
DEFINITION  ral guanine nucleotide dissociation stimulator isoform X1 [Dama
            dama].
ACCESSION   XP_061010302
VERSION     XP_061010302.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154319.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..879
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..879
                     /product="ral guanine nucleotide dissociation stimulator
                     isoform X1"
                     /calculated_mol_wt=96428
     Region          112..248
                     /region_name="RasGEFN"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     GTPases; N-terminal motif; smart00229"
                     /db_xref="CDD:214571"
     Site            order(131,191,195..196,199,202..203,240..241,244)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:100121"
     Region          346..608
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases. Small GTP-binding proteins of the Ras
                     superfamily function as molecular switches in fundamental
                     events such as signal transduction, cytoskeleton dynamics
                     and intracellular trafficking; cd00155"
                     /db_xref="CDD:238087"
     Site            order(379..381,394..395,397..399,401..402,405..406,409,
                     444,447..448,450..452,454..457,459..460,480,483,488..490,
                     493,530..532,535..537,539..541,543..546,561,565,600,
                     603..604)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     Region          762..847
                     /region_name="RA_RalGDS"
                     /note="Ras-associating (RA) domain found in Ral guanine
                     nucleotide dissociation stimulator (RalGDS) and similar
                     proteins; cd17209"
                     /db_xref="CDD:340729"
     Site            order(762..765,767,774..782,786..787,795,798..799,801)
                     /site_type="other"
                     /note="RA-Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:340729"
     CDS             1..879
                     /gene="RALGDS"
                     /coded_by="XM_061154319.1:1..2640"
                     /db_xref="GeneID:133064356"
ORIGIN      
        1 mvqrmwaeaa gpaggaeslf pgsrrsrsvw davrlevggp dscpvvlhsf tqldpdlprl
       61 esstqeigee lvngviysis lrkvqvhhga nkgqrwlgce nesalnlyet ckvrtvkagt
      121 leklvehlvp afqgsdlsyv tiflctyraf tttqqvldll fkrygrcdal tassrygcil
      181 pyssedggpq dqlrnaissi lgtwldqyse dfcqppdfpc lrqlvayvql nmpgsdlerr
      241 ahlllaqleh adlgeaepea lspapvpalk paaepepalg pdlepapala pepaptpapt
      301 paptpppele palsqalelg paaapeppwp lpvatenglg egkphllafp pdlvaeqftl
      361 mdaelfkkvv pyhclgsiws qrdkkgkehl aptvratvtq fnsvancvit tclgdrsvsa
      421 rhrarvvehw ievarecrvl knfsslhail salqsnsihr lkktweevsr dslrvfqkls
      481 eifsdennys lsrellikeg tskfatlemn pkraqrrpke agviqgtvpy lgtfltdlvm
      541 ldtamkdyly grlinfekrr kefeviaqik llqsacnnys itpeehfgaw framerlsea
      601 esytlscele ppsesasntl kvkkntaivk rwsdrqapsa elstggschs kscdqlrcgp
      661 ylssgdiada lsvhsagsss sdveeinmsf vpespdgqek kfwesasqss petsgissas
      721 sstssssast tpvastrthk rsvsgvcsyg sslplynqqv gdsciirvsl dvdngnmyks
      781 ilvtsqdkap avirkamdkh nldedepedy elvqvisddr klkipdnanv fyamnstany
      841 dfvlkkrtft kgtkvrhgas stlprmkqkg lkiakgifp
//
LOCUS       XP_061010304             876 aa            linear   MAM 02-DEC-2023
DEFINITION  ral guanine nucleotide dissociation stimulator isoform X2 [Dama
            dama].
ACCESSION   XP_061010304
VERSION     XP_061010304.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154321.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..876
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..876
                     /product="ral guanine nucleotide dissociation stimulator
                     isoform X2"
                     /calculated_mol_wt=96000
     Region          108..245
                     /region_name="RasGEFN"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     GTPases; N-terminal motif; smart00229"
                     /db_xref="CDD:214571"
     Site            order(127,188,192..193,196,199..200,237..238,241)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:100121"
     Region          343..605
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases. Small GTP-binding proteins of the Ras
                     superfamily function as molecular switches in fundamental
                     events such as signal transduction, cytoskeleton dynamics
                     and intracellular trafficking; cd00155"
                     /db_xref="CDD:238087"
     Site            order(376..378,391..392,394..396,398..399,402..403,406,
                     441,444..445,447..449,451..454,456..457,477,480,485..487,
                     490,527..529,532..534,536..538,540..543,558,562,597,
                     600..601)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     Region          759..844
                     /region_name="RA_RalGDS"
                     /note="Ras-associating (RA) domain found in Ral guanine
                     nucleotide dissociation stimulator (RalGDS) and similar
                     proteins; cd17209"
                     /db_xref="CDD:340729"
     Site            order(759..762,764,771..779,783..784,792,795..796,798)
                     /site_type="other"
                     /note="RA-Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:340729"
     CDS             1..876
                     /gene="RALGDS"
                     /coded_by="XM_061154321.1:9..2639"
                     /db_xref="GeneID:133064356"
ORIGIN      
        1 mwaeaagpag gaeslfpgsr rsrsvwdavr levggpdscp vvlhsftqld pdlprlesst
       61 qeigeelvng viysislrkv qvhhgankgq rwlgcenesa lnlyetckvr tvkagtlekl
      121 vehlvpafqg sdlsyvtifl ctyraftttq qvldllfksr ygrcdaltas srygcilpys
      181 sedggpqdql rnaissilgt wldqysedfc qppdfpclrq lvayvqlnmp gsdlerrahl
      241 llaqlehadl geaepealsp apvpalkpaa epepalgpdl epapalapep aptpaptpap
      301 tpppelepal sqalelgpaa apeppwplpv atenglgegk phllafppdl vaeqftlmda
      361 elfkkvvpyh clgsiwsqrd kkgkehlapt vratvtqfns vancvittcl gdrsvsarhr
      421 arvvehwiev arecrvlknf sslhailsal qsnsihrlkk tweevsrdsl rvfqklseif
      481 sdennyslsr ellikegtsk fatlemnpkr aqrrpkeagv iqgtvpylgt fltdlvmldt
      541 amkdylygrl infekrrkef eviaqikllq sacnnysitp eehfgawfra merlseaesy
      601 tlscelepps esasntlkvk kntaivkrws drqapsaels tggschsksc dqlrcgpyls
      661 sgdiadalsv hsagssssdv eeinmsfvpe spdgqekkfw esasqsspet sgissassst
      721 ssssasttpv astrthkrsv sgvcsygssl plynqqvgds ciirvsldvd ngnmyksilv
      781 tsqdkapavi rkamdkhnld edepedyelv qvisddrklk ipdnanvfya mnstanydfv
      841 lkkrtftkgt kvrhgasstl prmkqkglki akgifp
//
LOCUS       XP_061010305             867 aa            linear   MAM 02-DEC-2023
DEFINITION  ral guanine nucleotide dissociation stimulator isoform X3 [Dama
            dama].
ACCESSION   XP_061010305
VERSION     XP_061010305.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154322.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..867
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..867
                     /product="ral guanine nucleotide dissociation stimulator
                     isoform X3"
                     /calculated_mol_wt=95146
     Region          112..236
                     /region_name="RasGEFN"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     GTPases; N-terminal motif; smart00229"
                     /db_xref="CDD:214571"
     Site            order(131,179,183..184,187,190..191,228..229,232)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:100121"
     Region          334..596
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases. Small GTP-binding proteins of the Ras
                     superfamily function as molecular switches in fundamental
                     events such as signal transduction, cytoskeleton dynamics
                     and intracellular trafficking; cd00155"
                     /db_xref="CDD:238087"
     Site            order(367..369,382..383,385..387,389..390,393..394,397,
                     432,435..436,438..440,442..445,447..448,468,471,476..478,
                     481,518..520,523..525,527..529,531..534,549,553,588,
                     591..592)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     Region          750..835
                     /region_name="RA_RalGDS"
                     /note="Ras-associating (RA) domain found in Ral guanine
                     nucleotide dissociation stimulator (RalGDS) and similar
                     proteins; cd17209"
                     /db_xref="CDD:340729"
     Site            order(750..753,755,762..770,774..775,783,786..787,789)
                     /site_type="other"
                     /note="RA-Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:340729"
     CDS             1..867
                     /gene="RALGDS"
                     /coded_by="XM_061154322.1:1..2604"
                     /db_xref="GeneID:133064356"
ORIGIN      
        1 mvqrmwaeaa gpaggaeslf pgsrrsrsvw davrlevggp dscpvvlhsf tqldpdlprl
       61 esstqeigee lvngviysis lrkvqvhhga nkgqrwlgce nesalnlyet ckvrtvkagt
      121 leklvehlvp afqgsdlsyv tiflctyraf tttqqvldll fkrygcilpy ssedggpqdq
      181 lrnaissilg twldqysedf cqppdfpclr qlvayvqlnm pgsdlerrah lllaqlehad
      241 lgeaepeals papvpalkpa aepepalgpd lepapalape paptpaptpa ptpppelepa
      301 lsqalelgpa aapeppwplp vatenglgeg kphllafppd lvaeqftlmd aelfkkvvpy
      361 hclgsiwsqr dkkgkehlap tvratvtqfn svancvittc lgdrsvsarh rarvvehwie
      421 varecrvlkn fsslhailsa lqsnsihrlk ktweevsrds lrvfqklsei fsdennysls
      481 rellikegts kfatlemnpk raqrrpkeag viqgtvpylg tfltdlvmld tamkdylygr
      541 linfekrrke feviaqikll qsacnnysit peehfgawfr amerlseaes ytlscelepp
      601 sesasntlkv kkntaivkrw sdrqapsael stggschsks cdqlrcgpyl ssgdiadals
      661 vhsagssssd veeinmsfvp espdgqekkf wesasqsspe tsgissasss tssssasttp
      721 vastrthkrs vsgvcsygss lplynqqvgd sciirvsldv dngnmyksil vtsqdkapav
      781 irkamdkhnl dedepedyel vqvisddrkl kipdnanvfy amnstanydf vlkkrtftkg
      841 tkvrhgasst lprmkqkglk iakgifp
//
LOCUS       XP_061010306             856 aa            linear   MAM 02-DEC-2023
DEFINITION  ral guanine nucleotide dissociation stimulator isoform X4 [Dama
            dama].
ACCESSION   XP_061010306
VERSION     XP_061010306.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154323.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..856
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..856
                     /product="ral guanine nucleotide dissociation stimulator
                     isoform X4"
                     /calculated_mol_wt=94041
     Region          112..248
                     /region_name="RasGEFN"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     GTPases; N-terminal motif; smart00229"
                     /db_xref="CDD:214571"
     Site            order(131,191,195..196,199,202..203,240..241,244)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:100121"
     Region          346..608
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases. Small GTP-binding proteins of the Ras
                     superfamily function as molecular switches in fundamental
                     events such as signal transduction, cytoskeleton dynamics
                     and intracellular trafficking; cd00155"
                     /db_xref="CDD:238087"
     Site            order(379..381,394..395,397..399,401..402,405..406,409,
                     444,447..448,450..452,454..457,459..460,480,483,488..490,
                     493,530..532,535..537,539..541,543..546,561,565,600,
                     603..604)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     Region          739..824
                     /region_name="RA_RalGDS"
                     /note="Ras-associating (RA) domain found in Ral guanine
                     nucleotide dissociation stimulator (RalGDS) and similar
                     proteins; cd17209"
                     /db_xref="CDD:340729"
     Site            order(739..742,744,751..759,763..764,772,775..776,778)
                     /site_type="other"
                     /note="RA-Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:340729"
     CDS             1..856
                     /gene="RALGDS"
                     /coded_by="XM_061154323.1:1..2571"
                     /db_xref="GeneID:133064356"
ORIGIN      
        1 mvqrmwaeaa gpaggaeslf pgsrrsrsvw davrlevggp dscpvvlhsf tqldpdlprl
       61 esstqeigee lvngviysis lrkvqvhhga nkgqrwlgce nesalnlyet ckvrtvkagt
      121 leklvehlvp afqgsdlsyv tiflctyraf tttqqvldll fkrygrcdal tassrygcil
      181 pyssedggpq dqlrnaissi lgtwldqyse dfcqppdfpc lrqlvayvql nmpgsdlerr
      241 ahlllaqleh adlgeaepea lspapvpalk paaepepalg pdlepapala pepaptpapt
      301 paptpppele palsqalelg paaapeppwp lpvatenglg egkphllafp pdlvaeqftl
      361 mdaelfkkvv pyhclgsiws qrdkkgkehl aptvratvtq fnsvancvit tclgdrsvsa
      421 rhrarvvehw ievarecrvl knfsslhail salqsnsihr lkktweevsr dslrvfqkls
      481 eifsdennys lsrellikeg tskfatlemn pkraqrrpke agviqgtvpy lgtfltdlvm
      541 ldtamkdyly grlinfekrr kefeviaqik llqsacnnys itpeehfgaw framerlsea
      601 esytlscele ppsesasntl kvkkntaivk rwsecgpyls sgdiadalsv hsagssssdv
      661 eeinmsfvpe spdgqekkfw esasqsspet sgissassst ssssasttpv astrthkrsv
      721 sgvcsygssl plynqqvgds ciirvsldvd ngnmyksilv tsqdkapavi rkamdkhnld
      781 edepedyelv qvisddrklk ipdnanvfya mnstanydfv lkkrtftkgt kvrhgasstl
      841 prmkqkglki akgifp
//
LOCUS       XP_061010307             822 aa            linear   MAM 02-DEC-2023
DEFINITION  ral guanine nucleotide dissociation stimulator isoform X5 [Dama
            dama].
ACCESSION   XP_061010307
VERSION     XP_061010307.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154324.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..822
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..822
                     /product="ral guanine nucleotide dissociation stimulator
                     isoform X5"
                     /calculated_mol_wt=90639
     Region          112..248
                     /region_name="RasGEFN"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     GTPases; N-terminal motif; smart00229"
                     /db_xref="CDD:214571"
     Site            order(131,191,195..196,199,202..203,240..241,244)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:100121"
     Region          346..608
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases. Small GTP-binding proteins of the Ras
                     superfamily function as molecular switches in fundamental
                     events such as signal transduction, cytoskeleton dynamics
                     and intracellular trafficking; cd00155"
                     /db_xref="CDD:238087"
     Site            order(379..381,394..395,397..399,401..402,405..406,409,
                     444,447..448,450..452,454..457,459..460,480,483,488..490,
                     493,530..532,535..537,539..541,543..546,561,565,600,
                     603..604)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     Region          705..790
                     /region_name="RA_RalGDS"
                     /note="Ras-associating (RA) domain found in Ral guanine
                     nucleotide dissociation stimulator (RalGDS) and similar
                     proteins; cd17209"
                     /db_xref="CDD:340729"
     Site            order(705..708,710,717..725,729..730,738,741..742,744)
                     /site_type="other"
                     /note="RA-Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:340729"
     CDS             1..822
                     /gene="RALGDS"
                     /coded_by="XM_061154324.1:1..2469"
                     /db_xref="GeneID:133064356"
ORIGIN      
        1 mvqrmwaeaa gpaggaeslf pgsrrsrsvw davrlevggp dscpvvlhsf tqldpdlprl
       61 esstqeigee lvngviysis lrkvqvhhga nkgqrwlgce nesalnlyet ckvrtvkagt
      121 leklvehlvp afqgsdlsyv tiflctyraf tttqqvldll fkrygrcdal tassrygcil
      181 pyssedggpq dqlrnaissi lgtwldqyse dfcqppdfpc lrqlvayvql nmpgsdlerr
      241 ahlllaqleh adlgeaepea lspapvpalk paaepepalg pdlepapala pepaptpapt
      301 paptpppele palsqalelg paaapeppwp lpvatenglg egkphllafp pdlvaeqftl
      361 mdaelfkkvv pyhclgsiws qrdkkgkehl aptvratvtq fnsvancvit tclgdrsvsa
      421 rhrarvvehw ievarecrvl knfsslhail salqsnsihr lkktweevsr dslrvfqkls
      481 eifsdennys lsrellikeg tskfatlemn pkraqrrpke agviqgtvpy lgtfltdlvm
      541 ldtamkdyly grlinfekrr kefeviaqik llqsacnnys itpeehfgaw framerlsea
      601 esytlscele ppsesasntl kvkkntaivk rwsdrqapsa elstggschs kscdqlrcgp
      661 ylssgdiada lsvhsagsss sdveeinmsf vpespdgqek kqvgdsciir vsldvdngnm
      721 yksilvtsqd kapavirkam dkhnldedep edyelvqvis ddrklkipdn anvfyamnst
      781 anydfvlkkr tftkgtkvrh gasstlprmk qkglkiakgi fp
//
LOCUS       XP_061010308             821 aa            linear   MAM 02-DEC-2023
DEFINITION  ral guanine nucleotide dissociation stimulator isoform X6 [Dama
            dama].
ACCESSION   XP_061010308
VERSION     XP_061010308.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154325.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..821
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..821
                     /product="ral guanine nucleotide dissociation stimulator
                     isoform X6"
                     /calculated_mol_wt=90511
     Region          112..248
                     /region_name="RasGEFN"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     GTPases; N-terminal motif; smart00229"
                     /db_xref="CDD:214571"
     Site            order(131,191,195..196,199,202..203,240..241,244)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:100121"
     Region          346..608
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases. Small GTP-binding proteins of the Ras
                     superfamily function as molecular switches in fundamental
                     events such as signal transduction, cytoskeleton dynamics
                     and intracellular trafficking; cd00155"
                     /db_xref="CDD:238087"
     Site            order(379..381,394..395,397..399,401..402,405..406,409,
                     444,447..448,450..452,454..457,459..460,480,483,488..490,
                     493,530..532,535..537,539..541,543..546,561,565,600,
                     603..604)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     Region          704..789
                     /region_name="RA_RalGDS"
                     /note="Ras-associating (RA) domain found in Ral guanine
                     nucleotide dissociation stimulator (RalGDS) and similar
                     proteins; cd17209"
                     /db_xref="CDD:340729"
     Site            order(704..707,709,716..724,728..729,737,740..741,743)
                     /site_type="other"
                     /note="RA-Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:340729"
     CDS             1..821
                     /gene="RALGDS"
                     /coded_by="XM_061154325.1:1..2466"
                     /db_xref="GeneID:133064356"
ORIGIN      
        1 mvqrmwaeaa gpaggaeslf pgsrrsrsvw davrlevggp dscpvvlhsf tqldpdlprl
       61 esstqeigee lvngviysis lrkvqvhhga nkgqrwlgce nesalnlyet ckvrtvkagt
      121 leklvehlvp afqgsdlsyv tiflctyraf tttqqvldll fkrygrcdal tassrygcil
      181 pyssedggpq dqlrnaissi lgtwldqyse dfcqppdfpc lrqlvayvql nmpgsdlerr
      241 ahlllaqleh adlgeaepea lspapvpalk paaepepalg pdlepapala pepaptpapt
      301 paptpppele palsqalelg paaapeppwp lpvatenglg egkphllafp pdlvaeqftl
      361 mdaelfkkvv pyhclgsiws qrdkkgkehl aptvratvtq fnsvancvit tclgdrsvsa
      421 rhrarvvehw ievarecrvl knfsslhail salqsnsihr lkktweevsr dslrvfqkls
      481 eifsdennys lsrellikeg tskfatlemn pkraqrrpke agviqgtvpy lgtfltdlvm
      541 ldtamkdyly grlinfekrr kefeviaqik llqsacnnys itpeehfgaw framerlsea
      601 esytlscele ppsesasntl kvkkntaivk rwsdrqapsa elstggschs kscdqlrcgp
      661 ylssgdiada lsvhsagsss sdveeinmsf vpespdgqek kvgdsciirv sldvdngnmy
      721 ksilvtsqdk apavirkamd khnldedepe dyelvqvisd drklkipdna nvfyamnsta
      781 nydfvlkkrt ftkgtkvrhg asstlprmkq kglkiakgif p
//
LOCUS       XP_061010309             550 aa            linear   MAM 02-DEC-2023
DEFINITION  general transcription factor 3C polypeptide 5 isoform X1 [Dama
            dama].
ACCESSION   XP_061010309
VERSION     XP_061010309.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154326.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..550
                     /product="general transcription factor 3C polypeptide 5
                     isoform X1"
                     /calculated_mol_wt=62217
     Region          30..137
                     /region_name="Tau95_N"
                     /note="Tau95 Triple barrel domain; pfam17682"
                     /db_xref="CDD:465457"
     Region          173..327
                     /region_name="Tau95"
                     /note="RNA polymerase III transcription factor (TF)IIIC
                     subunit HTH domain; pfam09734"
                     /db_xref="CDD:462865"
     CDS             1..550
                     /gene="GTF3C5"
                     /coded_by="XM_061154326.1:260..1912"
                     /db_xref="GeneID:133064357"
ORIGIN      
        1 maaaaaaaag adarpgaaip velrrerrmv cveypgvvrd vskmlrtlgg eegvsriysd
       61 atkrlelyfr pkdpychpvc anrfstnsll lrikrktrrq sgalgpearp rvtydieslg
      121 vvstvfkfqg msdfqylavh teaggrqvsm ydkvlmlkpq kesffhqdlp lyipppifsr
      181 ldtpvdyyyr petqhregyn npaisgenli glsrarrphn aifvnfegde vperpmeaav
      241 qtwkkvctnp vdhrveeelr klfdirpiws rnalkanisv hpdklkillp fvayymitgp
      301 wrslwirfgf dprkrpeaki yqvldfrirc gmkyvtcgsc ragqasgqcp spacgyapsd
      361 mpvkakrsty nyslpitvkk tnpcrgplaa sqlvtmhdlk qglgpsgsas aqksspnkyk
      421 lkdsvyifqe galppyrqmf yqfcdlnvee lqriihrndg aesscterdg wclpkttdel
      481 rdtmslmirq tirskrpalf ssptkadsgk eqltgesged eeedeeeeee efkpsdgsen
      541 emeteildyv
//
LOCUS       XP_061010310             542 aa            linear   MAM 02-DEC-2023
DEFINITION  general transcription factor 3C polypeptide 5 isoform X2 [Dama
            dama].
ACCESSION   XP_061010310
VERSION     XP_061010310.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154327.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..542
                     /product="general transcription factor 3C polypeptide 5
                     isoform X2"
                     /calculated_mol_wt=61438
     Region          30..137
                     /region_name="Tau95_N"
                     /note="Tau95 Triple barrel domain; pfam17682"
                     /db_xref="CDD:465457"
     Region          173..327
                     /region_name="Tau95"
                     /note="RNA polymerase III transcription factor (TF)IIIC
                     subunit HTH domain; pfam09734"
                     /db_xref="CDD:462865"
     CDS             1..542
                     /gene="GTF3C5"
                     /coded_by="XM_061154327.1:260..1888"
                     /db_xref="GeneID:133064357"
ORIGIN      
        1 maaaaaaaag adarpgaaip velrrerrmv cveypgvvrd vskmlrtlgg eegvsriysd
       61 atkrlelyfr pkdpychpvc anrfstnsll lrikrktrrq sgalgpearp rvtydieslg
      121 vvstvfkfqg msdfqylavh teaggrqvsm ydkvlmlkpq kesffhqdlp lyipppifsr
      181 ldtpvdyyyr petqhregyn npaisgenli glsrarrphn aifvnfegde vperpmeaav
      241 qtwkkvctnp vdhrveeelr klfdirpiws rnalkanisv hpdklkillp fvayymitgp
      301 wrslwirfgf dprkrpeaki yqvldfrirc gmkyvtcgsc ragqasgqcp spacgyapsd
      361 mpvkakrsty nyslpitvkk ttsqlvtmhd lkqglgpsgs asaqksspnk yklkdsvyif
      421 qegalppyrq mfyqfcdlnv eelqriihrn dgaesscter dgwclpkttd elrdtmslmi
      481 rqtirskrpa lfssptkads gkeqltgesg edeeedeeee eeefkpsdgs enemeteild
      541 yv
//
LOCUS       XP_061010311             530 aa            linear   MAM 02-DEC-2023
DEFINITION  general transcription factor 3C polypeptide 5 isoform X3 [Dama
            dama].
ACCESSION   XP_061010311
VERSION     XP_061010311.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154328.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..530
                     /product="general transcription factor 3C polypeptide 5
                     isoform X3"
                     /calculated_mol_wt=60352
     Region          30..137
                     /region_name="Tau95_N"
                     /note="Tau95 Triple barrel domain; pfam17682"
                     /db_xref="CDD:465457"
     Region          173..327
                     /region_name="Tau95"
                     /note="RNA polymerase III transcription factor (TF)IIIC
                     subunit HTH domain; pfam09734"
                     /db_xref="CDD:462865"
     CDS             1..530
                     /gene="GTF3C5"
                     /coded_by="XM_061154328.1:260..1852"
                     /db_xref="GeneID:133064357"
ORIGIN      
        1 maaaaaaaag adarpgaaip velrrerrmv cveypgvvrd vskmlrtlgg eegvsriysd
       61 atkrlelyfr pkdpychpvc anrfstnsll lrikrktrrq sgalgpearp rvtydieslg
      121 vvstvfkfqg msdfqylavh teaggrqvsm ydkvlmlkpq kesffhqdlp lyipppifsr
      181 ldtpvdyyyr petqhregyn npaisgenli glsrarrphn aifvnfegde vperpmeaav
      241 qtwkkvctnp vdhrveeelr klfdirpiws rnalkanisv hpdklkillp fvayymitgp
      301 wrslwirfgf dprkrpeaki yqvldfrirc gmkygyapsd mpvkakrsty nyslpitvkk
      361 tnpcrgplaa sqlvtmhdlk qglgpsgsas aqksspnkyk lkdsvyifqe galppyrqmf
      421 yqfcdlnvee lqriihrndg aesscterdg wclpkttdel rdtmslmirq tirskrpalf
      481 ssptkadsgk eqltgesged eeedeeeeee efkpsdgsen emeteildyv
//
LOCUS       XP_061010312             522 aa            linear   MAM 02-DEC-2023
DEFINITION  general transcription factor 3C polypeptide 5 isoform X4 [Dama
            dama].
ACCESSION   XP_061010312
VERSION     XP_061010312.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154329.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..522
                     /product="general transcription factor 3C polypeptide 5
                     isoform X4"
                     /calculated_mol_wt=59573
     Region          30..137
                     /region_name="Tau95_N"
                     /note="Tau95 Triple barrel domain; pfam17682"
                     /db_xref="CDD:465457"
     Region          173..327
                     /region_name="Tau95"
                     /note="RNA polymerase III transcription factor (TF)IIIC
                     subunit HTH domain; pfam09734"
                     /db_xref="CDD:462865"
     CDS             1..522
                     /gene="GTF3C5"
                     /coded_by="XM_061154329.1:260..1828"
                     /db_xref="GeneID:133064357"
ORIGIN      
        1 maaaaaaaag adarpgaaip velrrerrmv cveypgvvrd vskmlrtlgg eegvsriysd
       61 atkrlelyfr pkdpychpvc anrfstnsll lrikrktrrq sgalgpearp rvtydieslg
      121 vvstvfkfqg msdfqylavh teaggrqvsm ydkvlmlkpq kesffhqdlp lyipppifsr
      181 ldtpvdyyyr petqhregyn npaisgenli glsrarrphn aifvnfegde vperpmeaav
      241 qtwkkvctnp vdhrveeelr klfdirpiws rnalkanisv hpdklkillp fvayymitgp
      301 wrslwirfgf dprkrpeaki yqvldfrirc gmkygyapsd mpvkakrsty nyslpitvkk
      361 ttsqlvtmhd lkqglgpsgs asaqksspnk yklkdsvyif qegalppyrq mfyqfcdlnv
      421 eelqriihrn dgaesscter dgwclpkttd elrdtmslmi rqtirskrpa lfssptkads
      481 gkeqltgesg edeeedeeee eeefkpsdgs enemeteild yv
//
LOCUS       XP_061010314            1158 aa            linear   MAM 02-DEC-2023
DEFINITION  hamartin isoform X1 [Dama dama].
ACCESSION   XP_061010314
VERSION     XP_061010314.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154331.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1158
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1158
                     /product="hamartin isoform X1"
                     /calculated_mol_wt=128138
     Region          7..715
                     /region_name="Hamartin"
                     /note="Hamartin protein; pfam04388"
                     /db_xref="CDD:461287"
     Region          738..>979
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1158
                     /gene="TSC1"
                     /coded_by="XM_061154331.1:236..3712"
                     /db_xref="GeneID:133064358"
ORIGIN      
        1 maqqasigel lsmldspllg vrddvtavfk enlnsdrgpm lvntlvdyyl etnsqpvlhi
       61 lttlqephdk hlldkmneyv gkapsrlsal lllghvvrlq pswkhklsqa pllpsllkcl
      121 kmdtdvvvlt tgvlvlitml pmipqsgkqh lhdffdifgr lsswclkkpg hvtevylvhl
      181 hasvyalfhr lygmypcnfv sflrshysmk enletfedvv kpmmehvrih pelvtgskdh
      241 eldprrwkrl ethdvvieca kisldpteas yedgysvshq isarfphrsa dvsassyvdt
      301 qnsygnatst pystsrltln apgqlpqtls spstrllaep pqatlwspsa vcgmstppts
      361 pgnvppdlsh pysrvfgttg gkgtplgtpa tspppappch sddyvhlslp qatapkkeer
      421 tdsarpclhr qphlpndrgl delhggkgsv tlsdlpgflg dlaseedsie kdkeeaaisk
      481 elseittada eplvprggfd spfyrdslpg cprktlsass stqgtsanpe plnssldkpg
      541 pdtpkqaftp idlpcggtge spagnrerqa sleasiltps pckippqrgv gfgsgqpppy
      601 dhlfevalpk tahhfvskkt eellkkakgg teedvppsas pvevldrlvq qgadvhskel
      661 srlslpsksv dwthfggspp sdeirtlrnq llllhnqlly erfkrqqhal rnrrllrkvi
      721 raaaleehna amkdqlklqe kdiqiwkisl qkeqarysql qeqrdtvvtq lhsqirqlqh
      781 dreefynqsq elqtkledcr nmiaelrvel kkansrvcht elllsqvsqk lsnsesvqqq
      841 meflnrqllv lgevnelyle qlqnkhsdtt kevemmkaay rkeleknrsh vlqqnqrldt
      901 cqkrileles hlakkdhlll eqkkyledvk lqargqlqaa esryeaqkri tqvfeleild
      961 lygklekdgl lrkleeqkpe aaeaaeerld ccqdgcsdsm tghneeapgh ngetkpprps
     1021 gargggggrg ggsssselst pekppnprag pfssrwetav gepasgtpat vgslpssesf
     1081 lgmkarelfr nksesqcded gltvgslsea lktelgkdsg vearppptld gplppapkpd
     1141 svgqlrimdy neaqlehs
//
LOCUS       XP_061010315            1158 aa            linear   MAM 02-DEC-2023
DEFINITION  hamartin isoform X1 [Dama dama].
ACCESSION   XP_061010315
VERSION     XP_061010315.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154332.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1158
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1158
                     /product="hamartin isoform X1"
                     /calculated_mol_wt=128138
     Region          7..715
                     /region_name="Hamartin"
                     /note="Hamartin protein; pfam04388"
                     /db_xref="CDD:461287"
     Region          738..>979
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1158
                     /gene="TSC1"
                     /coded_by="XM_061154332.1:274..3750"
                     /db_xref="GeneID:133064358"
ORIGIN      
        1 maqqasigel lsmldspllg vrddvtavfk enlnsdrgpm lvntlvdyyl etnsqpvlhi
       61 lttlqephdk hlldkmneyv gkapsrlsal lllghvvrlq pswkhklsqa pllpsllkcl
      121 kmdtdvvvlt tgvlvlitml pmipqsgkqh lhdffdifgr lsswclkkpg hvtevylvhl
      181 hasvyalfhr lygmypcnfv sflrshysmk enletfedvv kpmmehvrih pelvtgskdh
      241 eldprrwkrl ethdvvieca kisldpteas yedgysvshq isarfphrsa dvsassyvdt
      301 qnsygnatst pystsrltln apgqlpqtls spstrllaep pqatlwspsa vcgmstppts
      361 pgnvppdlsh pysrvfgttg gkgtplgtpa tspppappch sddyvhlslp qatapkkeer
      421 tdsarpclhr qphlpndrgl delhggkgsv tlsdlpgflg dlaseedsie kdkeeaaisk
      481 elseittada eplvprggfd spfyrdslpg cprktlsass stqgtsanpe plnssldkpg
      541 pdtpkqaftp idlpcggtge spagnrerqa sleasiltps pckippqrgv gfgsgqpppy
      601 dhlfevalpk tahhfvskkt eellkkakgg teedvppsas pvevldrlvq qgadvhskel
      661 srlslpsksv dwthfggspp sdeirtlrnq llllhnqlly erfkrqqhal rnrrllrkvi
      721 raaaleehna amkdqlklqe kdiqiwkisl qkeqarysql qeqrdtvvtq lhsqirqlqh
      781 dreefynqsq elqtkledcr nmiaelrvel kkansrvcht elllsqvsqk lsnsesvqqq
      841 meflnrqllv lgevnelyle qlqnkhsdtt kevemmkaay rkeleknrsh vlqqnqrldt
      901 cqkrileles hlakkdhlll eqkkyledvk lqargqlqaa esryeaqkri tqvfeleild
      961 lygklekdgl lrkleeqkpe aaeaaeerld ccqdgcsdsm tghneeapgh ngetkpprps
     1021 gargggggrg ggsssselst pekppnprag pfssrwetav gepasgtpat vgslpssesf
     1081 lgmkarelfr nksesqcded gltvgslsea lktelgkdsg vearppptld gplppapkpd
     1141 svgqlrimdy neaqlehs
//
LOCUS       XP_061010316            1158 aa            linear   MAM 02-DEC-2023
DEFINITION  hamartin isoform X1 [Dama dama].
ACCESSION   XP_061010316
VERSION     XP_061010316.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154333.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1158
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1158
                     /product="hamartin isoform X1"
                     /calculated_mol_wt=128138
     Region          7..715
                     /region_name="Hamartin"
                     /note="Hamartin protein; pfam04388"
                     /db_xref="CDD:461287"
     Region          738..>979
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1158
                     /gene="TSC1"
                     /coded_by="XM_061154333.1:299..3775"
                     /db_xref="GeneID:133064358"
ORIGIN      
        1 maqqasigel lsmldspllg vrddvtavfk enlnsdrgpm lvntlvdyyl etnsqpvlhi
       61 lttlqephdk hlldkmneyv gkapsrlsal lllghvvrlq pswkhklsqa pllpsllkcl
      121 kmdtdvvvlt tgvlvlitml pmipqsgkqh lhdffdifgr lsswclkkpg hvtevylvhl
      181 hasvyalfhr lygmypcnfv sflrshysmk enletfedvv kpmmehvrih pelvtgskdh
      241 eldprrwkrl ethdvvieca kisldpteas yedgysvshq isarfphrsa dvsassyvdt
      301 qnsygnatst pystsrltln apgqlpqtls spstrllaep pqatlwspsa vcgmstppts
      361 pgnvppdlsh pysrvfgttg gkgtplgtpa tspppappch sddyvhlslp qatapkkeer
      421 tdsarpclhr qphlpndrgl delhggkgsv tlsdlpgflg dlaseedsie kdkeeaaisk
      481 elseittada eplvprggfd spfyrdslpg cprktlsass stqgtsanpe plnssldkpg
      541 pdtpkqaftp idlpcggtge spagnrerqa sleasiltps pckippqrgv gfgsgqpppy
      601 dhlfevalpk tahhfvskkt eellkkakgg teedvppsas pvevldrlvq qgadvhskel
      661 srlslpsksv dwthfggspp sdeirtlrnq llllhnqlly erfkrqqhal rnrrllrkvi
      721 raaaleehna amkdqlklqe kdiqiwkisl qkeqarysql qeqrdtvvtq lhsqirqlqh
      781 dreefynqsq elqtkledcr nmiaelrvel kkansrvcht elllsqvsqk lsnsesvqqq
      841 meflnrqllv lgevnelyle qlqnkhsdtt kevemmkaay rkeleknrsh vlqqnqrldt
      901 cqkrileles hlakkdhlll eqkkyledvk lqargqlqaa esryeaqkri tqvfeleild
      961 lygklekdgl lrkleeqkpe aaeaaeerld ccqdgcsdsm tghneeapgh ngetkpprps
     1021 gargggggrg ggsssselst pekppnprag pfssrwetav gepasgtpat vgslpssesf
     1081 lgmkarelfr nksesqcded gltvgslsea lktelgkdsg vearppptld gplppapkpd
     1141 svgqlrimdy neaqlehs
//
LOCUS       XP_061010317             824 aa            linear   MAM 02-DEC-2023
DEFINITION  hamartin isoform X2 [Dama dama].
ACCESSION   XP_061010317
VERSION     XP_061010317.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154334.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..824
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..824
                     /product="hamartin isoform X2"
                     /calculated_mol_wt=90589
     Region          <10..381
                     /region_name="Hamartin"
                     /note="Hamartin protein; pfam04388"
                     /db_xref="CDD:461287"
     Region          404..>645
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..824
                     /gene="TSC1"
                     /coded_by="XM_061154334.1:7..2481"
                     /db_xref="GeneID:133064358"
ORIGIN      
        1 mlthriamat lwspsavcgm stpptspgnv ppdlshpysr vfgttggkgt plgtpatspp
       61 pappchsddy vhlslpqata pkkeertdsa rpclhrqphl pndrgldelh ggkgsvtlsd
      121 lpgflgdlas eedsiekdke eaaiskelse ittadaeplv prggfdspfy rdslpgcprk
      181 tlsassstqg tsanpeplns sldkpgpdtp kqaftpidlp cggtgespag nrerqaslea
      241 siltpspcki ppqrgvgfgs gqpppydhlf evalpktahh fvskkteell kkakggteed
      301 vppsaspvev ldrlvqqgad vhskelsrls lpsksvdwth fggsppsdei rtlrnqllll
      361 hnqllyerfk rqqhalrnrr llrkviraaa leehnaamkd qlklqekdiq iwkislqkeq
      421 arysqlqeqr dtvvtqlhsq irqlqhdree fynqsqelqt kledcrnmia elrvelkkan
      481 srvchtelll sqvsqklsns esvqqqmefl nrqllvlgev nelyleqlqn khsdttkeve
      541 mmkaayrkel eknrshvlqq nqrldtcqkr ileleshlak kdhllleqkk yledvklqar
      601 gqlqaaesry eaqkritqvf eleildlygk lekdgllrkl eeqkpeaaea aeerldccqd
      661 gcsdsmtghn eeapghnget kpprpsgarg ggggrgggss sselstpekp pnpragpfss
      721 rwetavgepa sgtpatvgsl pssesflgmk arelfrnkse sqcdedgltv gslsealkte
      781 lgkdsgvear ppptldgplp papkpdsvgq lrimdyneaq lehs
//
LOCUS       XP_061010318             813 aa            linear   MAM 02-DEC-2023
DEFINITION  general transcription factor 3C polypeptide 4 [Dama dama].
ACCESSION   XP_061010318
VERSION     XP_061010318.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154335.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..813
                     /product="general transcription factor 3C polypeptide 4"
                     /calculated_mol_wt=91305
     Region          60..250
                     /region_name="TFIIIC_delta"
                     /note="Transcription factor IIIC subunit delta N-term;
                     pfam12657"
                     /db_xref="CDD:463658"
     Region          261..710
                     /region_name="DUF5921"
                     /note="Domain of unknown function (DUF5921); pfam19336"
                     /db_xref="CDD:466046"
     Region          736..808
                     /region_name="zf-TFIIIC"
                     /note="Putative zinc-finger of transcription factor IIIC
                     complex; pfam12660"
                     /db_xref="CDD:372246"
     CDS             1..813
                     /gene="GTF3C4"
                     /coded_by="XM_061154335.1:32..2473"
                     /db_xref="GeneID:133064359"
ORIGIN      
        1 mntaltrvgp aaerpappee vegseavgke paadaapgps tafrllvtrr epavrlqyav
       61 sgleplawse dhrvsvstar siavlelicd vhnpgqdlvi hrtsvpaplh scflkvgskr
      121 evaeckqrfa tsedptvsqt fmldrvfnpe gkalpplrgf kytswspvgc dangrcllaa
      181 ltmdnrltiq anlnrlqwvq lvdlteiyge rlyetsyrfs rneapegnlr dftefqrrhs
      241 mqapvrmews gicttqqvkh nnecrdvgsv llavlfengn iavwqfqlpf vgkesisscn
      301 tiesginsps vlfwweyehn nrkmsglivg safgpvkilp vnlkavkgyf tlrqpvvlwk
      361 etdqlpvhsi kcvplyhpyq kcscslvvaa rgsyvfwcll liskaglnvh nshvtglhsl
      421 pivsmtadkq ngtvytcssd gkvrqlipif tdvalkfehq liklsdvfgs vrthgiavsp
      481 cgaylavitt egmvnglhpv nknyqvqfvt lktfeeaaaq llessvqnlf kqvdlidlvr
      541 wkilkdkhip qflhealekk iessgatyyw rfklfllril yqsmqktpse alckptheds
      601 killvdspgt gnaedeqqee gtsskqiskq gkdgdpedpt edslpqsgdt ggrepmeekl
      661 leiqgkieav emhltrehmk rvlgevylht witentsipt rglcnflmsd eeyddrtarv
      721 lighiskkmn kqtfpehcsl ckeilpftdr kqavcsnghi wlrcfltyqs cqsliyrrcl
      781 lhdsiarhpi pedpdwikrl lqspcpfcds pvf
//
LOCUS       XP_061010319             734 aa            linear   MAM 02-DEC-2023
DEFINITION  probable ATP-dependent RNA helicase DDX31 [Dama dama].
ACCESSION   XP_061010319
VERSION     XP_061010319.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154336.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..734
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..734
                     /product="probable ATP-dependent RNA helicase DDX31"
                     /calculated_mol_wt=80894
     Region          134..591
                     /region_name="SrmB"
                     /note="Superfamily II DNA and RNA helicase [Replication,
                     recombination and repair]; COG0513"
                     /db_xref="CDD:440279"
     Region          143..346
                     /region_name="DEADc_DDX31"
                     /note="DEAD-box helicase domain of DEAD box protein 31;
                     cd17949"
                     /db_xref="CDD:350707"
     Site            order(152..153,155..157,160,178..185)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350707"
     Region          596..656
                     /region_name="DUF4217"
                     /note="Domain of unknown function (DUF4217); pfam13959"
                     /db_xref="CDD:464056"
     CDS             1..734
                     /gene="DDX31"
                     /coded_by="XM_061154336.1:64..2268"
                     /db_xref="GeneID:133064360"
ORIGIN      
        1 maavsgvlpq vpepraavfr tfskprpaha rrqaaatkrk cqasseappa krrskasflp
       61 akktatketr rtlkgkaqkt fspkkssaga sdgnqerklg iktsslfknn peipelprpv
      121 vkqvqeevft sdafqaldlh phlistintv lnmssmtsvq kqsipvlleg rdalvrsqtg
      181 sgktlaycip vvqslqamqs kiqrgdgpya lilvptrela lqsfdtvqkl lkpftwivpg
      241 vlmggekrks ekarlrkgin ilistpgrlv dhikstksih frqirwlild eadrildlgf
      301 ekdltvilna vnaecqerqn vllsatlteg varladislh dpvsisvlde shdlsspese
      361 afleasppqa tdeldgfaip agleqhvvvv psklrlvcla afilqkckfe rdqkvivffs
      421 scelvefhyt lfletllsgs galaperlps tstplkflrl hsaldqeert avfqdfmhsr
      481 tgilfctdia argldlpqvt wivqynapss paeyihrigr tarigchgss llvlapseae
      541 yvnslashki nvsemkmedi lsvltkddcf kgrrgggqks rtagpqeire ratvlqtvfe
      601 dyvhsseetv srakkalqsf irayatypre lkhifhirll hlghmaksfg lrdapknlca
      661 savkkkkanl krpdlqrkkt qskhrlaeil rseyasgmet gsakvrkqnt rsgpasqprg
      721 tarnpgpasa egtd
//
LOCUS       XP_061010320             765 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription termination factor 1 isoform X1 [Dama dama].
ACCESSION   XP_061010320
VERSION     XP_061010320.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154337.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..765
                     /product="transcription termination factor 1 isoform X1"
                     /calculated_mol_wt=87638
     Region          504..560
                     /region_name="Myb_DNA-bind_6"
                     /note="Myb-like DNA-binding domain; pfam13921"
                     /db_xref="CDD:372817"
     CDS             1..765
                     /gene="TTF1"
                     /coded_by="XM_061154337.1:695..2992"
                     /db_xref="GeneID:133064361"
ORIGIN      
        1 megkssslet qtpvfvkkka khskhkdrhr rpsqesfraa planeqcdim krkkkrkdsq
       61 hlvssplrks eicdetemat skpkkkkkrr ksalgvdret gvacvlvdke nikntpknfr
      121 sdvdvvyvda skeqksterp eaddprsvtk pcentseelh gevrkkrkkk kkkhkkrqre
      181 veswdavqes pdassalpra asqeqepqpq vdqegglrql svsaghsksr krkrkhpdpp
      241 efealaaper aesvysegsr vadevetagg sqdssglkkk skkrkrrsle stvapgdfsa
      301 pgrcsedtpl dslegtliee sakprpqeen ppacsrkvqr septnedksn sakeseakyl
      361 sedsrdsedp evelesavkq lqefipdikd raattikrmy rddlgrfkef kaqgvtikfg
      421 kfsvkenkql ernvqeflsl tgienadkll ytdrypeeks vitdlkrkya frvhigkgia
      481 rpwklvyyra kkmfdvnnyk gryskgdtek lkiyqslhgn dwkkigemvs rsslsvalkf
      541 sqisgqinhg awsktetqkl ikaveevilk kmspqelnem dsklqlnpeg rlsivrekly
      601 kgiswvevea rvetrnwmqc kskwteiltk rmtngrdvyr gvnalqakin lierlyeinv
      661 qdvneidwed lasiigdvpp syvqtkfykl katcvpfwqk ktfpeiidyl yetslpllke
      721 klekmmekkg teiqapaapk pvflfrdify yddddseged rdeks
//
LOCUS       XP_061010321             765 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription termination factor 1 isoform X1 [Dama dama].
ACCESSION   XP_061010321
VERSION     XP_061010321.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154338.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..765
                     /product="transcription termination factor 1 isoform X1"
                     /calculated_mol_wt=87638
     Region          504..560
                     /region_name="Myb_DNA-bind_6"
                     /note="Myb-like DNA-binding domain; pfam13921"
                     /db_xref="CDD:372817"
     CDS             1..765
                     /gene="TTF1"
                     /coded_by="XM_061154338.1:78..2375"
                     /db_xref="GeneID:133064361"
ORIGIN      
        1 megkssslet qtpvfvkkka khskhkdrhr rpsqesfraa planeqcdim krkkkrkdsq
       61 hlvssplrks eicdetemat skpkkkkkrr ksalgvdret gvacvlvdke nikntpknfr
      121 sdvdvvyvda skeqksterp eaddprsvtk pcentseelh gevrkkrkkk kkkhkkrqre
      181 veswdavqes pdassalpra asqeqepqpq vdqegglrql svsaghsksr krkrkhpdpp
      241 efealaaper aesvysegsr vadevetagg sqdssglkkk skkrkrrsle stvapgdfsa
      301 pgrcsedtpl dslegtliee sakprpqeen ppacsrkvqr septnedksn sakeseakyl
      361 sedsrdsedp evelesavkq lqefipdikd raattikrmy rddlgrfkef kaqgvtikfg
      421 kfsvkenkql ernvqeflsl tgienadkll ytdrypeeks vitdlkrkya frvhigkgia
      481 rpwklvyyra kkmfdvnnyk gryskgdtek lkiyqslhgn dwkkigemvs rsslsvalkf
      541 sqisgqinhg awsktetqkl ikaveevilk kmspqelnem dsklqlnpeg rlsivrekly
      601 kgiswvevea rvetrnwmqc kskwteiltk rmtngrdvyr gvnalqakin lierlyeinv
      661 qdvneidwed lasiigdvpp syvqtkfykl katcvpfwqk ktfpeiidyl yetslpllke
      721 klekmmekkg teiqapaapk pvflfrdify yddddseged rdeks
//
LOCUS       XP_061010322             765 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription termination factor 1 isoform X1 [Dama dama].
ACCESSION   XP_061010322
VERSION     XP_061010322.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154339.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..765
                     /product="transcription termination factor 1 isoform X1"
                     /calculated_mol_wt=87638
     Region          504..560
                     /region_name="Myb_DNA-bind_6"
                     /note="Myb-like DNA-binding domain; pfam13921"
                     /db_xref="CDD:372817"
     CDS             1..765
                     /gene="TTF1"
                     /coded_by="XM_061154339.1:46..2343"
                     /db_xref="GeneID:133064361"
ORIGIN      
        1 megkssslet qtpvfvkkka khskhkdrhr rpsqesfraa planeqcdim krkkkrkdsq
       61 hlvssplrks eicdetemat skpkkkkkrr ksalgvdret gvacvlvdke nikntpknfr
      121 sdvdvvyvda skeqksterp eaddprsvtk pcentseelh gevrkkrkkk kkkhkkrqre
      181 veswdavqes pdassalpra asqeqepqpq vdqegglrql svsaghsksr krkrkhpdpp
      241 efealaaper aesvysegsr vadevetagg sqdssglkkk skkrkrrsle stvapgdfsa
      301 pgrcsedtpl dslegtliee sakprpqeen ppacsrkvqr septnedksn sakeseakyl
      361 sedsrdsedp evelesavkq lqefipdikd raattikrmy rddlgrfkef kaqgvtikfg
      421 kfsvkenkql ernvqeflsl tgienadkll ytdrypeeks vitdlkrkya frvhigkgia
      481 rpwklvyyra kkmfdvnnyk gryskgdtek lkiyqslhgn dwkkigemvs rsslsvalkf
      541 sqisgqinhg awsktetqkl ikaveevilk kmspqelnem dsklqlnpeg rlsivrekly
      601 kgiswvevea rvetrnwmqc kskwteiltk rmtngrdvyr gvnalqakin lierlyeinv
      661 qdvneidwed lasiigdvpp syvqtkfykl katcvpfwqk ktfpeiidyl yetslpllke
      721 klekmmekkg teiqapaapk pvflfrdify yddddseged rdeks
//
LOCUS       XP_061010323             367 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription termination factor 1 isoform X2 [Dama dama].
ACCESSION   XP_061010323
VERSION     XP_061010323.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154340.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..367
                     /product="transcription termination factor 1 isoform X2"
                     /calculated_mol_wt=42915
     Region          106..162
                     /region_name="Myb_DNA-bind_6"
                     /note="Myb-like DNA-binding domain; pfam13921"
                     /db_xref="CDD:372817"
     CDS             1..367
                     /gene="TTF1"
                     /coded_by="XM_061154340.1:217..1320"
                     /db_xref="GeneID:133064361"
ORIGIN      
        1 myrddlgrfk efkaqgvtik fgkfsvkenk qlernvqefl sltgienadk llytdrypee
       61 ksvitdlkrk yafrvhigkg iarpwklvyy rakkmfdvnn ykgryskgdt eklkiyqslh
      121 gndwkkigem vsrsslsval kfsqisgqin hgawsktetq klikaveevi lkkmspqeln
      181 emdsklqlnp egrlsivrek lykgiswvev earvetrnwm qckskwteil tkrmtngrdv
      241 yrgvnalqak inlierlyei nvqdvneidw edlasiigdv ppsyvqtkfy klkatcvpfw
      301 qkktfpeiid ylyetslpll keklekmmek kgteiqapaa pkpvflfrdi fyyddddseg
      361 edrdeks
//
LOCUS       XP_061010324            2682 aa            linear   MAM 02-DEC-2023
DEFINITION  probable helicase senataxin isoform X1 [Dama dama].
ACCESSION   XP_061010324
VERSION     XP_061010324.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154341.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2682
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2682
                     /product="probable helicase senataxin isoform X1"
                     /calculated_mol_wt=303131
     Region          58..>372
                     /region_name="SEN1_N"
                     /note="SEN1 N terminal; pfam12726"
                     /db_xref="CDD:432746"
     Region          1944..2269
                     /region_name="DEXXQc_SETX"
                     /note="DEXXQ-box helicase domain of SETX; cd18042"
                     /db_xref="CDD:438712"
     Site            order(1948,1976..1981,2220,2268..2269)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:438712"
     Region          2235..2434
                     /region_name="AAA_12"
                     /note="AAA domain; pfam13087"
                     /db_xref="CDD:463780"
     CDS             1..2682
                     /gene="SETX"
                     /coded_by="XM_061154341.1:328..8376"
                     /db_xref="GeneID:133064363"
ORIGIN      
        1 mvpssknade inktafqkkc rmstccwctp ggtsttdflq ryasktrsse fqtadedlcy
       61 clecvaeyhk ardelpflhe vlweletlrl inhfersmka eigdddelyi vdnngeaqlf
      121 dftgqdfenk lrvplleilk ypylllhehv nelcvealcr meqancsfqv fdkhpgiylf
      181 lvhpnemvrr wailtarnlg kvdrddyydl qevltclfkv ielgllenpd iytssvlekg
      241 klvllpshmy dtanyknywl gicmlltile eqamdslllg sdkqndfmqs ilhtmerqsn
      301 ddsvdpfwpa lhcfmvildr lgskvwgqli dpieafqtii nnvsynreiq nirnssmrtk
      361 lepesylddm vtcsqivyny npektkkdsg wrsaicpdyc pnmyeemetl anvlqsdigq
      421 dmrvhnstfl wfipfvqslm dlkdlgvayi vevihhlyse vkdvlnqtda vcdkvteffl
      481 lilvsvielh rnkkclhllw vssqqwveav vkcaklptta farssekssg ncskgtamis
      541 slslhsmpsn svqlacvqli rsllkegyql gqqtlckrfw dklnlflrgn lslgwqltsq
      601 ethelqtclk qiirnikfkv pqcstfvdln packtppasy keeseqigkk sekdghclen
      661 ssptfskepm kadtyqvqes ilskanntie enkepyyikd lkledhlsak sclklssknl
      721 acervqnqvk istgkyksvk enssytpqng tlrngpekvf drgiiisrrl ltvsstdsle
      781 kvsasnedfs lkdgglgkss kakskthkdg vcaklshvik kqhrrsisle enltvssies
      841 fyskkdtggq kgsgnisnpp lvpngilddk ngeqksqscl llrkkevkke kldifstpen
      901 scqiqeshvd tkdlvsltem tdtcmtkasp fkepvtghel rdrkisrstd pfssnlreqd
      961 lssspqpntl tdsqvdrdlh rlsliaqasv tkfpsdstqk sssqiqrkvk dekrcftanq
     1021 niretchaqv iiisdsdddd deerilglkk hmkeikacie kecpeqhtsi antnveqkvi
     1081 keenpmsllq feesdsqffe fetpcevfsv wqdekpdkns aqenennpcl thvgdtandw
     1141 gyetdyvsee vikkvaenfe ertkahssst svenfceiev kkpkrrryek piaedplrps
     1201 sssvknedqs dtnkgnlsen dfkgvdtrst vpsssvqrna avspkksppk prtyskpvrk
     1261 vpvaktskks hsdtkkgqsk sshyiscrtt paivppkkfr qcpeptstve klglkkaprr
     1321 afelsqrsle civqlrdhgk tvgvvdtrkk tklispqtls vrnnkkllts qdlqmqrqmr
     1381 sksqqnrqer fdcqstdmtr agphaaqssv pesnksdysh nggaevtann kgkqlitcqs
     1441 feteplkanq cnpvmvngri atnevivpts edplgrgdlt vhrlevatlr egepefssdi
     1501 eednifltqr dpedmdlcsq ierendklie vipgkdtiqg eeecvsrpql eslsstkcky
     1561 kdcvealknp geycskhskt katdedvfrk pglplsvskr srpsttkvfs ssstsriagl
     1621 skslestaal psslknkssg aqsvlkgpqp pllvslkpva evkglcnvfp aqtpdnsnrq
     1681 vssvpfgesr sfltsspvni ltspqsicdt fvkevlkwry emfvnfdqcg pplslcqsit
     1741 rrvpirfqdc gdyfsvffpl vvlntfetva qewinspnke kfhqlhlrkf pgdykkywef
     1801 vvyleecela kqlhpkendl vflvperpne ekkdlewshl edaceyycgy vhkfrrtsvm
     1861 rngktecsvs iqtqdnlpvn lnelvkcfvi sslvttqrkl kamsllsgrn qlarailnpn
     1921 pmdfctkdll tttserivay lkdfnedqkk aietayamvk hsssvakicl ihgppgtgks
     1981 ktivgilyrl ltenqrrghs densnakikq nrvlvcapsn aavdelmkki ilefkekckd
     2041 kknpmgncgd inlvrlgpek sinnevlrfs ldsqvnhrmk kdlpshvqem hkrkefldrq
     2101 ldelsrqral crggresqrq eldgkiarvs kerqelaski kevqgrpqkt qsiiileshv
     2161 icctlstsgg llleaafrgq ggvpfscviv deagqsceve tltplihrcn klvlvgdpkq
     2221 lpptvisvka qdygydqsmm arfhkllees vehnmigrlp vlqltiqyrm hpdiclfpss
     2281 yvydgtlktn rgtetsrcss dwpfqpylvf dvgdglerrd ndsyvnvqei klvmelikli
     2341 kdkrrdinfr nigiithyka qktmiqkdld kefdrkgaae vdtvdafqgr qkdcvivtcv
     2401 rasatqgsig flaslqrlnv titrakyslf ilghlrtlve nrhwyhliqd aqkrgaiikt
     2461 cdknyrhdam kilklkpllq rslthpptva peasrpqggl psskqdgels ktsfasslyh
     2521 spsdskeatv tdaakdperp pnqdrlrdpr llrrmglafd aqginlrepq plspqhsgav
     2581 ppsgapgcpg spqepctigq qgvtlnnhtp hmqcdspaas tdtstskkkc dqeegvlghr
     2641 retralsegd qewwasshtk rnsdwdergl eedssskkrr vl
//
LOCUS       XP_061010325            2661 aa            linear   MAM 02-DEC-2023
DEFINITION  probable helicase senataxin isoform X2 [Dama dama].
ACCESSION   XP_061010325
VERSION     XP_061010325.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154342.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2661
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2661
                     /product="probable helicase senataxin isoform X2"
                     /calculated_mol_wt=300753
     Region          37..>351
                     /region_name="SEN1_N"
                     /note="SEN1 N terminal; pfam12726"
                     /db_xref="CDD:432746"
     Region          1923..2248
                     /region_name="DEXXQc_SETX"
                     /note="DEXXQ-box helicase domain of SETX; cd18042"
                     /db_xref="CDD:438712"
     Site            order(1927,1955..1960,2199,2247..2248)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:438712"
     Region          2214..2413
                     /region_name="AAA_12"
                     /note="AAA domain; pfam13087"
                     /db_xref="CDD:463780"
     CDS             1..2661
                     /gene="SETX"
                     /coded_by="XM_061154342.1:275..8260"
                     /db_xref="GeneID:133064363"
ORIGIN      
        1 mstccwctpg gtsttdflqr yasktrssef qtadedlcyc lecvaeyhka rdelpflhev
       61 lweletlrli nhfersmkae igdddelyiv dnngeaqlfd ftgqdfenkl rvplleilky
      121 pylllhehvn elcvealcrm eqancsfqvf dkhpgiylfl vhpnemvrrw ailtarnlgk
      181 vdrddyydlq evltclfkvi elgllenpdi ytssvlekgk lvllpshmyd tanyknywlg
      241 icmlltilee qamdslllgs dkqndfmqsi lhtmerqsnd dsvdpfwpal hcfmvildrl
      301 gskvwgqlid pieafqtiin nvsynreiqn irnssmrtkl epesylddmv tcsqivynyn
      361 pektkkdsgw rsaicpdycp nmyeemetla nvlqsdigqd mrvhnstflw fipfvqslmd
      421 lkdlgvayiv evihhlysev kdvlnqtdav cdkvteffll ilvsvielhr nkkclhllwv
      481 ssqqwveavv kcaklpttaf arssekssgn cskgtamiss lslhsmpsns vqlacvqlir
      541 sllkegyqlg qqtlckrfwd klnlflrgnl slgwqltsqe thelqtclkq iirnikfkvp
      601 qcstfvdlnp acktppasyk eeseqigkks ekdghclens sptfskepmk adtyqvqesi
      661 lskanntiee nkepyyikdl kledhlsaks clklssknla cervqnqvki stgkyksvke
      721 nssytpqngt lrngpekvfd rgiiisrrll tvsstdslek vsasnedfsl kdgglgkssk
      781 akskthkdgv caklshvikk qhrrsislee nltvssiesf yskkdtggqk gsgnisnppl
      841 vpngilddkn geqksqscll lrkkevkkek ldifstpens cqiqeshvdt kdlvsltemt
      901 dtcmtkaspf kepvtghelr drkisrstdp fssnlreqdl ssspqpntlt dsqvdrdlhr
      961 lsliaqasvt kfpsdstqks ssqiqrkvkd ekrcftanqn iretchaqvi iisdsddddd
     1021 eerilglkkh mkeikaciek ecpeqhtsia ntnveqkvik eenpmsllqf eesdsqffef
     1081 etpcevfsvw qdekpdknsa qenennpclt hvgdtandwg yetdyvseev ikkvaenfee
     1141 rtkahsssts venfceievk kpkrrryekp iaedplrpss ssvknedqsd tnkgnlsend
     1201 fkgvdtrstv psssvqrnaa vspkksppkp rtyskpvrkv pvaktskksh sdtkkgqsks
     1261 shyiscrttp aivppkkfrq cpeptstvek lglkkaprra felsqrslec ivqlrdhgkt
     1321 vgvvdtrkkt klispqtlsv rnnkklltsq dlqmqrqmrs ksqqnrqerf dcqstdmtra
     1381 gphaaqssvp esnksdyshn ggaevtannk gkqlitcqsf eteplkanqc npvmvngria
     1441 tnevivptse dplgrgdltv hrlevatlre gepefssdie ednifltqrd pedmdlcsqi
     1501 erendkliev ipgkdtiqge eecvsrpqle slsstkckyk dcvealknpg eycskhsktk
     1561 atdedvfrkp glplsvskrs rpsttkvfss sstsriagls kslestaalp sslknkssga
     1621 qsvlkgpqpp llvslkpvae vkglcnvfpa qtpdnsnrqv ssvpfgesrs fltsspvnil
     1681 tspqsicdtf vkevlkwrye mfvnfdqcgp plslcqsitr rvpirfqdcg dyfsvffplv
     1741 vlntfetvaq ewinspnkek fhqlhlrkfp gdykkywefv vyleecelak qlhpkendlv
     1801 flvperpnee kkdlewshle daceyycgyv hkfrrtsvmr ngktecsvsi qtqdnlpvnl
     1861 nelvkcfvis slvttqrklk amsllsgrnq larailnpnp mdfctkdllt ttserivayl
     1921 kdfnedqkka ietayamvkh sssvakicli hgppgtgksk tivgilyrll tenqrrghsd
     1981 ensnakikqn rvlvcapsna avdelmkkii lefkekckdk knpmgncgdi nlvrlgpeks
     2041 innevlrfsl dsqvnhrmkk dlpshvqemh krkefldrql delsrqralc rggresqrqe
     2101 ldgkiarvsk erqelaskik evqgrpqktq siiileshvi cctlstsggl lleaafrgqg
     2161 gvpfscvivd eagqscevet ltplihrcnk lvlvgdpkql pptvisvkaq dygydqsmma
     2221 rfhklleesv ehnmigrlpv lqltiqyrmh pdiclfpssy vydgtlktnr gtetsrcssd
     2281 wpfqpylvfd vgdglerrdn dsyvnvqeik lvmeliklik dkrrdinfrn igiithykaq
     2341 ktmiqkdldk efdrkgaaev dtvdafqgrq kdcvivtcvr asatqgsigf laslqrlnvt
     2401 itrakyslfi lghlrtlven rhwyhliqda qkrgaiiktc dknyrhdamk ilklkpllqr
     2461 slthpptvap easrpqgglp sskqdgelsk tsfasslyhs psdskeatvt daakdperpp
     2521 nqdrlrdprl lrrmglafda qginlrepqp lspqhsgavp psgapgcpgs pqepctigqq
     2581 gvtlnnhtph mqcdspaast dtstskkkcd qeegvlghrr etralsegdq ewwasshtkr
     2641 nsdwdergle edssskkrrv l
//
LOCUS       XP_061010327             684 aa            linear   MAM 02-DEC-2023
DEFINITION  netrin-G2 isoform X1 [Dama dama].
ACCESSION   XP_061010327
VERSION     XP_061010327.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154344.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..684
                     /product="netrin-G2 isoform X1"
                     /calculated_mol_wt=75109
     Region          106..331
                     /region_name="Laminin_N"
                     /note="Laminin N-terminal (Domain VI); pfam00055"
                     /db_xref="CDD:459653"
     Region          332..378
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(333,335,342,351,353,362)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          507..555
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(507,509,519,527,530,539)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          563..610
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(563,565,575,581,583,592)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          <617..641
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     CDS             1..684
                     /gene="NTNG2"
                     /coded_by="XM_061154344.1:487..2541"
                     /db_xref="GeneID:133064364"
ORIGIN      
        1 mlrvpgtsgl rrpvdvafpc ggctsrlsqp pphqapcgph pgdcaamlrl lalllhclpl
       61 asgdydicks wvttdegptw efyacqpkvm rlkdyvkvkv epsgitcgdp perfcshenp
      121 ylcsnecdas npdlahpprl mfdredegla tywqsvtwsr ypspleanit lswnksvelt
      181 ddvvvtfeyg rptvmvleks ldngrtwqpy qfyaedcmea fgmparrard lsasgahrvl
      241 cteeysrwag skkeklvrfe vrdrfaifag pdlrnmdnly trlesakglk efftltdlrm
      301 rllrpalggt yvqrenlyky fyaisnievt grckcnlhan lcsvrdgslq cecehnttgp
      361 dcgkckrsfr trswragsyl plphgspnac aaagsavgsi srsrkdpvpk apvataairg
      421 dpatptppts tawapgapst lqptewsrps taaplwasap wpqvsssaea agtsavapap
      481 apakasklfq lrpkspqvmp veefedcecy ghsnrcsyid flnvvtcvsc khntrgqhcq
      541 hcrlgyyrng saelddenvc iecncnqigs vhdrcnetgf cecregaagp kcddclpthy
      601 wrqgcypnvc dddqllcqng gtcvqnqrca cprgytgarc eqprcdpadd eggldcdrap
      661 gaaprpatll gcllllglaa rldc
//
LOCUS       XP_061010328             577 aa            linear   MAM 02-DEC-2023
DEFINITION  netrin-G2 isoform X2 [Dama dama].
ACCESSION   XP_061010328
VERSION     XP_061010328.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154345.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..577
                     /product="netrin-G2 isoform X2"
                     /calculated_mol_wt=64119
     Region          106..331
                     /region_name="Laminin_N"
                     /note="Laminin N-terminal (Domain VI); pfam00055"
                     /db_xref="CDD:459653"
     Region          332..378
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(333,335,342,351,353,362)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          400..448
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(400,402,412,420,423,432)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          456..503
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(456,458,468,474,476,485)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     CDS             1..577
                     /gene="NTNG2"
                     /coded_by="XM_061154345.1:487..2220"
                     /db_xref="GeneID:133064364"
ORIGIN      
        1 mlrvpgtsgl rrpvdvafpc ggctsrlsqp pphqapcgph pgdcaamlrl lalllhclpl
       61 asgdydicks wvttdegptw efyacqpkvm rlkdyvkvkv epsgitcgdp perfcshenp
      121 ylcsnecdas npdlahpprl mfdredegla tywqsvtwsr ypspleanit lswnksvelt
      181 ddvvvtfeyg rptvmvleks ldngrtwqpy qfyaedcmea fgmparrard lsasgahrvl
      241 cteeysrwag skkeklvrfe vrdrfaifag pdlrnmdnly trlesakglk efftltdlrm
      301 rllrpalggt yvqrenlyky fyaisnievt grckcnlhan lcsvrdgslq cecehnttgp
      361 dcgkckrsfr trswragsyl plphgspnac aaagsavgnc ecyghsnrcs yidflnvvtc
      421 vsckhntrgq hcqhcrlgyy rngsaeldde nvciecncnq igsvhdrcne tgfcecrega
      481 agpkcddclp thywrqgcyp nvcdddqllc qnggtcvqnq rcacprgytg arceqprcdp
      541 addeggldcd rapgaaprpa tllgcllllg laarldc
//
LOCUS       XP_061010329             311 aa            linear   MAM 02-DEC-2023
DEFINITION  mediator of RNA polymerase II transcription subunit 27 isoform X1
            [Dama dama].
ACCESSION   XP_061010329
VERSION     XP_061010329.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154346.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..311
                     /product="mediator of RNA polymerase II transcription
                     subunit 27 isoform X1"
                     /calculated_mol_wt=35242
     Region          228..309
                     /region_name="Med27"
                     /note="Mediator complex subunit 27; pfam11571"
                     /db_xref="CDD:463298"
     CDS             1..311
                     /gene="MED27"
                     /coded_by="XM_061154346.1:22..957"
                     /db_xref="GeneID:133064365"
ORIGIN      
        1 madvlsvgvn leafaqaisa iqalrssvsr vfdclkdgmr nketlegrek afiahfqdnl
       61 hsvnrdlnel erlsnlvgkp senhplhnsg llsldpvqdk tplysqllqa ykwsnklqyh
      121 aglasgllnq qslkrsanqm gvsakrrpka qpttlvlppq yvddvisrid rmfpemtihl
      181 srpngtsaml lvtlgkvlkv ivvmrslfid rtivkgynen vytedgkldi wsksnyqvfq
      241 kvtdhattal lhyqlpqmpd vvvrsfmtwl rsyiklfqap cqrcgkflqd glpptwrdfr
      301 tleafhdtcr q
//
LOCUS       XP_061010330             297 aa            linear   MAM 02-DEC-2023
DEFINITION  mediator of RNA polymerase II transcription subunit 27 isoform X2
            [Dama dama].
ACCESSION   XP_061010330
VERSION     XP_061010330.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154347.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..297
                     /product="mediator of RNA polymerase II transcription
                     subunit 27 isoform X2"
                     /calculated_mol_wt=33504
     Region          226..295
                     /region_name="Med27"
                     /note="Mediator complex subunit 27; pfam11571"
                     /db_xref="CDD:463298"
     CDS             1..297
                     /gene="MED27"
                     /coded_by="XM_061154347.1:22..915"
                     /db_xref="GeneID:133064365"
ORIGIN      
        1 madvlsvgvn leafaqaisa iqalrssvsr vfdclkdgmr nketlegrek afiahfqdnl
       61 hsvnrdlnel erlsnlvgkp senhplhnsg llsldpvqdk tplysqllqa ykwsnklqyh
      121 aglasgllnq qslkrsanqm gvsakrrpka qpttlvlppq yvddvisrid rmfpemtihl
      181 srpngtsaml lvtlgkvlkv ivvmrslfid rtivkgynen vytedgkvtd hattallhyq
      241 lpqmpdvvvr sfmtwlrsyi klfqapcqrc gkflqdglpp twrdfrtlea fhdtcrq
//
LOCUS       XP_061010331            1094 aa            linear   MAM 02-DEC-2023
DEFINITION  rap guanine nucleotide exchange factor 1 isoform X1 [Dama dama].
ACCESSION   XP_061010331
VERSION     XP_061010331.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154348.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1094
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1094
                     /product="rap guanine nucleotide exchange factor 1 isoform
                     X1"
                     /calculated_mol_wt=122629
     Region          231..>494
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          705..846
                     /region_name="RasGEFN"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     GTPases; N-terminal motif; smart00229"
                     /db_xref="CDD:214571"
     Site            order(724,769,773..774,777,780..781,817..818,821)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:100121"
     Region          853..1082
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases; smart00147"
                     /db_xref="CDD:214539"
     Site            order(883..885,896..897,899..901,903..904,907..908,911,
                     944,947..948,950..952,954..957,959..960,975,978,983..985,
                     988,1001..1003,1006..1008,1010..1012,1014..1017,1031,1035,
                     1069,1072..1073)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     CDS             1..1094
                     /gene="LOC133064366"
                     /coded_by="XM_061154348.1:143..3427"
                     /db_xref="GeneID:133064366"
ORIGIN      
        1 mgnaiekqkp lrrshlcpwk qdsqrshlss ftmklkdkfh spkikrtpsk kgkpaevsvk
       61 ipekpmnkea tdrflpegyp ipldleqqav efmstsavas rsqrqknlsw leekekevvs
      121 alryfktivd kmaidkkvle mlpgsaskvl eailplvqsd priqhssals scysrvyqsl
      181 anlirwsdqv mlegvnsedk emvttvkgvi kavldgvkel vrltiekqgh psptspvkps
      241 spackpdsqs elpltdreme ilnkttglsq steglpdsmd eevappkppl pgirvvdnsp
      301 ppalppkkrq sapsptrvav vapmsratsg sslpvginrq dfdvdcyaqr rlsggshsys
      361 gesprlspcs sigklsksde qlssldrdsg qcsrntscet ldhydpdyef lqqdlsnadq
      421 ipqqvacnls plpeslgesg spflghplql plgscpqpdg ssapgqqtdv ppalpekkrr
      481 saasqtldss gcrasyerhp sqydnisedd lqnpasvqsv pftpfaailp fqqggssasv
      541 dfmgdftvse stgdpekppp lpekknkhml aymqlledys epqpsmfyqt pqkehvyqqk
      601 nkllmevygf ndsfsagdap helapppalp pkqrqlespa akdghsrdtt sagcvpgkeg
      661 rdsgdralks pdaseaqsee evdelslidh neimarltlk qegddgpdvr ggsgdillvh
      721 atetdrkdlv lyceafltty rtfitpeeli kklqyryekf spfadtfkkr vskntffvlv
      781 rvvdelclve lteeilkllm elvfrlvrsg elslarvlrk nildkvdqkk llrcansdqp
      841 laargvaarp gtlhdfhshe iaeqltllda elfykieipe vllwakeqne ekspnltqft
      901 ehfnnmsywv rsiimlqeka qdrerlllkf ikimkhlrkl nnfnsylail saldsapirr
      961 lewqkqtseg laeyctlids sssfrayraa lseveppcip ylglilqdlt fvhlgnpdli
     1021 dgkvnfskrw qqfnildsmr cfqqvhydir rnddiinffn dfsdhlaeea lwelslkikp
     1081 rnitrrktdr eekt
//
LOCUS       XP_061010332            1093 aa            linear   MAM 02-DEC-2023
DEFINITION  rap guanine nucleotide exchange factor 1 isoform X2 [Dama dama].
ACCESSION   XP_061010332
VERSION     XP_061010332.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154349.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1093
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1093
                     /product="rap guanine nucleotide exchange factor 1 isoform
                     X2"
                     /calculated_mol_wt=122212
     Region          230..>493
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          704..845
                     /region_name="RasGEFN"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     GTPases; N-terminal motif; smart00229"
                     /db_xref="CDD:214571"
     Site            order(723,768,772..773,776,779..780,816..817,820)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:100121"
     Region          852..1081
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases; smart00147"
                     /db_xref="CDD:214539"
     Site            order(882..884,895..896,898..900,902..903,906..907,910,
                     943,946..947,949..951,953..956,958..959,974,977,982..984,
                     987,1000..1002,1005..1007,1009..1011,1013..1016,1030,1034,
                     1068,1071..1072)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     CDS             1..1093
                     /gene="LOC133064366"
                     /coded_by="XM_061154349.1:47..3328"
                     /db_xref="GeneID:133064366"
ORIGIN      
        1 msgglglrrs pemsgkieka dsqrshlssf tmklkdkfhs pkikrtpskk gkpaevsvki
       61 pekpmnkeat drflpegypi pldleqqave fmstsavasr sqrqknlswl eekekevvsa
      121 lryfktivdk maidkkvlem lpgsaskvle ailplvqsdp riqhssalss cysrvyqsla
      181 nlirwsdqvm legvnsedke mvttvkgvik avldgvkelv rltiekqghp sptspvkpss
      241 packpdsqse lpltdremei lnkttglsqs teglpdsmde evappkpplp girvvdnspp
      301 palppkkrqs apsptrvavv apmsratsgs slpvginrqd fdvdcyaqrr lsggshsysg
      361 esprlspcss igklsksdeq lssldrdsgq csrntscetl dhydpdyefl qqdlsnadqi
      421 pqqvacnlsp lpeslgesgs pflghplqlp lgscpqpdgs sapgqqtdvp palpekkrrs
      481 aasqtldssg crasyerhps qydniseddl qnpasvqsvp ftpfaailpf qqggssasvd
      541 fmgdftvses tgdpekpppl pekknkhmla ymqlledyse pqpsmfyqtp qkehvyqqkn
      601 kllmevygfn dsfsagdaph elapppalpp kqrqlespaa kdghsrdtts agcvpgkegr
      661 dsgdralksp daseaqseee vdelslidhn eimarltlkq egddgpdvrg gsgdillvha
      721 tetdrkdlvl yceaflttyr tfitpeelik klqyryekfs pfadtfkkrv skntffvlvr
      781 vvdelclvel teeilkllme lvfrlvrsge lslarvlrkn ildkvdqkkl lrcansdqpl
      841 aargvaarpg tlhdfhshei aeqltlldae lfykieipev llwakeqnee kspnltqfte
      901 hfnnmsywvr siimlqekaq drerlllkfi kimkhlrkln nfnsylails aldsapirrl
      961 ewqkqtsegl aeyctlidss ssfrayraal seveppcipy lglilqdltf vhlgnpdlid
     1021 gkvnfskrwq qfnildsmrc fqqvhydirr nddiinffnd fsdhlaeeal welslkikpr
     1081 nitrrktdre ekt
//
LOCUS       XP_061010333            1076 aa            linear   MAM 02-DEC-2023
DEFINITION  rap guanine nucleotide exchange factor 1 isoform X3 [Dama dama].
ACCESSION   XP_061010333
VERSION     XP_061010333.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154350.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1076
                     /product="rap guanine nucleotide exchange factor 1 isoform
                     X3"
                     /calculated_mol_wt=120486
     Region          213..>476
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          687..828
                     /region_name="RasGEFN"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     GTPases; N-terminal motif; smart00229"
                     /db_xref="CDD:214571"
     Site            order(706,751,755..756,759,762..763,799..800,803)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:100121"
     Region          835..1064
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases; smart00147"
                     /db_xref="CDD:214539"
     Site            order(865..867,878..879,881..883,885..886,889..890,893,
                     926,929..930,932..934,936..939,941..942,957,960,965..967,
                     970,983..985,988..990,992..994,996..999,1013,1017,1051,
                     1054..1055)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     CDS             1..1076
                     /gene="LOC133064366"
                     /coded_by="XM_061154350.1:16..3246"
                     /db_xref="GeneID:133064366"
ORIGIN      
        1 mktdsqrshl ssftmklkdk fhspkikrtp skkgkpaevs vkipekpmnk eatdrflpeg
       61 ypipldleqq avefmstsav asrsqrqknl swleekekev vsalryfkti vdkmaidkkv
      121 lemlpgsask vleailplvq sdpriqhssa lsscysrvyq slanlirwsd qvmlegvnse
      181 dkemvttvkg vikavldgvk elvrltiekq ghpsptspvk psspackpds qselpltdre
      241 meilnkttgl sqsteglpds mdeevappkp plpgirvvdn spppalppkk rqsapsptrv
      301 avvapmsrat sgsslpvgin rqdfdvdcya qrrlsggshs ysgesprlsp cssigklsks
      361 deqlssldrd sgqcsrntsc etldhydpdy eflqqdlsna dqipqqvacn lsplpeslge
      421 sgspflghpl qlplgscpqp dgssapgqqt dvppalpekk rrsaasqtld ssgcrasyer
      481 hpsqydnise ddlqnpasvq svpftpfaai lpfqqggssa svdfmgdftv sestgdpekp
      541 pplpekknkh mlaymqlled ysepqpsmfy qtpqkehvyq qknkllmevy gfndsfsagd
      601 aphelapppa lppkqrqles paakdghsrd ttsagcvpgk egrdsgdral kspdaseaqs
      661 eeevdelsli dhneimarlt lkqegddgpd vrggsgdill vhatetdrkd lvlyceaflt
      721 tyrtfitpee likklqyrye kfspfadtfk krvskntffv lvrvvdelcl velteeilkl
      781 lmelvfrlvr sgelslarvl rknildkvdq kkllrcansd qplaargvaa rpgtlhdfhs
      841 heiaeqltll daelfykiei pevllwakeq neekspnltq ftehfnnmsy wvrsiimlqe
      901 kaqdrerlll kfikimkhlr klnnfnsyla ilsaldsapi rrlewqkqts eglaeyctli
      961 dssssfrayr aalseveppc ipylglilqd ltfvhlgnpd lidgkvnfsk rwqqfnilds
     1021 mrcfqqvhyd irrnddiinf fndfsdhlae ealwelslki kprnitrrkt dreekt
//
LOCUS       XP_061010334            1075 aa            linear   MAM 02-DEC-2023
DEFINITION  rap guanine nucleotide exchange factor 1 isoform X4 [Dama dama].
ACCESSION   XP_061010334
VERSION     XP_061010334.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154351.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1075
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1075
                     /product="rap guanine nucleotide exchange factor 1 isoform
                     X4"
                     /calculated_mol_wt=120385
     Region          212..>475
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          686..827
                     /region_name="RasGEFN"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     GTPases; N-terminal motif; smart00229"
                     /db_xref="CDD:214571"
     Site            order(705,750,754..755,758,761..762,798..799,802)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:100121"
     Region          834..1063
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases; smart00147"
                     /db_xref="CDD:214539"
     Site            order(864..866,877..878,880..882,884..885,888..889,892,
                     925,928..929,931..933,935..938,940..941,956,959,964..966,
                     969,982..984,987..989,991..993,995..998,1012,1016,1050,
                     1053..1054)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     CDS             1..1075
                     /gene="LOC133064366"
                     /coded_by="XM_061154351.1:16..3243"
                     /db_xref="GeneID:133064366"
ORIGIN      
        1 mkdsqrshls sftmklkdkf hspkikrtps kkgkpaevsv kipekpmnke atdrflpegy
       61 pipldleqqa vefmstsava srsqrqknls wleekekevv salryfktiv dkmaidkkvl
      121 emlpgsaskv leailplvqs dpriqhssal sscysrvyqs lanlirwsdq vmlegvnsed
      181 kemvttvkgv ikavldgvke lvrltiekqg hpsptspvkp sspackpdsq selpltdrem
      241 eilnkttgls qsteglpdsm deevappkpp lpgirvvdns pppalppkkr qsapsptrva
      301 vvapmsrats gsslpvginr qdfdvdcyaq rrlsggshsy sgesprlspc ssigklsksd
      361 eqlssldrds gqcsrntsce tldhydpdye flqqdlsnad qipqqvacnl splpeslges
      421 gspflghplq lplgscpqpd gssapgqqtd vppalpekkr rsaasqtlds sgcrasyerh
      481 psqydnised dlqnpasvqs vpftpfaail pfqqggssas vdfmgdftvs estgdpekpp
      541 plpekknkhm laymqlledy sepqpsmfyq tpqkehvyqq knkllmevyg fndsfsagda
      601 phelapppal ppkqrqlesp aakdghsrdt tsagcvpgke grdsgdralk spdaseaqse
      661 eevdelslid hneimarltl kqegddgpdv rggsgdillv hatetdrkdl vlyceafltt
      721 yrtfitpeel ikklqyryek fspfadtfkk rvskntffvl vrvvdelclv elteeilkll
      781 melvfrlvrs gelslarvlr knildkvdqk kllrcansdq plaargvaar pgtlhdfhsh
      841 eiaeqltlld aelfykieip evllwakeqn eekspnltqf tehfnnmsyw vrsiimlqek
      901 aqdrerlllk fikimkhlrk lnnfnsylai lsaldsapir rlewqkqtse glaeyctlid
      961 ssssfrayra alseveppci pylglilqdl tfvhlgnpdl idgkvnfskr wqqfnildsm
     1021 rcfqqvhydi rrnddiinff ndfsdhlaee alwelslkik prnitrrktd reekt
//
LOCUS       XP_061010335            1056 aa            linear   MAM 02-DEC-2023
DEFINITION  rap guanine nucleotide exchange factor 1 isoform X5 [Dama dama].
ACCESSION   XP_061010335
VERSION     XP_061010335.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154352.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1056
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1056
                     /product="rap guanine nucleotide exchange factor 1 isoform
                     X5"
                     /calculated_mol_wt=118350
     Region          193..>456
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          667..808
                     /region_name="RasGEFN"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     GTPases; N-terminal motif; smart00229"
                     /db_xref="CDD:214571"
     Site            order(686,731,735..736,739,742..743,779..780,783)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:100121"
     Region          815..1044
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases; smart00147"
                     /db_xref="CDD:214539"
     Site            order(845..847,858..859,861..863,865..866,869..870,873,
                     906,909..910,912..914,916..919,921..922,937,940,945..947,
                     950,963..965,968..970,972..974,976..979,993,997,1031,
                     1034..1035)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     CDS             1..1056
                     /gene="LOC133064366"
                     /coded_by="XM_061154352.1:142..3312"
                     /db_xref="GeneID:133064366"
ORIGIN      
        1 mgnaiekqkp lrrshlcpwk qdsqrshlss ftmklkdkfh spkikrtpsk kgkpaevsvk
       61 ipekpmnknl swleekekev vsalryfkti vdkmaidkkv lemlpgsask vleailplvq
      121 sdpriqhssa lsscysrvyq slanlirwsd qvmlegvnse dkemvttvkg vikavldgvk
      181 elvrltiekq ghpsptspvk psspackpds qselpltdre meilnkttgl sqsteglpds
      241 mdeevappkp plpgirvvdn spppalppkk rqsapsptrv avvapmsrat sgsslpvgin
      301 rqdfdvdcya qrrlsggshs ysgesprlsp cssigklsks deqlssldrd sgqcsrntsc
      361 etldhydpdy eflqqdlsna dqipqqvacn lsplpeslge sgspflghpl qlplgscpqp
      421 dgssapgqqt dvppalpekk rrsaasqtld ssgcrasyer hpsqydnise ddlqnpasvq
      481 svpftpfaai lpfqqggssa svdfmgdftv sestgdpekp pplpekknkh mlaymqlled
      541 ysepqpsmfy qtpqkehvyq qknkllmevy gfndsfsagd aphelapppa lppkqrqles
      601 paakdghsrd ttsagcvpgk egrdsgdral kspdaseaqs eeevdelsli dhneimarlt
      661 lkqegddgpd vrggsgdill vhatetdrkd lvlyceaflt tyrtfitpee likklqyrye
      721 kfspfadtfk krvskntffv lvrvvdelcl velteeilkl lmelvfrlvr sgelslarvl
      781 rknildkvdq kkllrcansd qplaargvaa rpgtlhdfhs heiaeqltll daelfykiei
      841 pevllwakeq neekspnltq ftehfnnmsy wvrsiimlqe kaqdrerlll kfikimkhlr
      901 klnnfnsyla ilsaldsapi rrlewqkqts eglaeyctli dssssfrayr aalseveppc
      961 ipylglilqd ltfvhlgnpd lidgkvnfsk rwqqfnilds mrcfqqvhyd irrnddiinf
     1021 fndfsdhlae ealwelslki kprnitrrkt dreekt
//
LOCUS       XP_061010338            1055 aa            linear   MAM 02-DEC-2023
DEFINITION  rap guanine nucleotide exchange factor 1 isoform X6 [Dama dama].
ACCESSION   XP_061010338
VERSION     XP_061010338.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154355.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1055
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1055
                     /product="rap guanine nucleotide exchange factor 1 isoform
                     X6"
                     /calculated_mol_wt=117933
     Region          192..>455
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          666..807
                     /region_name="RasGEFN"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     GTPases; N-terminal motif; smart00229"
                     /db_xref="CDD:214571"
     Site            order(685,730,734..735,738,741..742,778..779,782)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:100121"
     Region          814..1043
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases; smart00147"
                     /db_xref="CDD:214539"
     Site            order(844..846,857..858,860..862,864..865,868..869,872,
                     905,908..909,911..913,915..918,920..921,936,939,944..946,
                     949,962..964,967..969,971..973,975..978,992,996,1030,
                     1033..1034)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     CDS             1..1055
                     /gene="LOC133064366"
                     /coded_by="XM_061154355.1:47..3214"
                     /db_xref="GeneID:133064366"
ORIGIN      
        1 msgglglrrs pemsgkieka dsqrshlssf tmklkdkfhs pkikrtpskk gkpaevsvki
       61 pekpmnknls wleekekevv salryfktiv dkmaidkkvl emlpgsaskv leailplvqs
      121 dpriqhssal sscysrvyqs lanlirwsdq vmlegvnsed kemvttvkgv ikavldgvke
      181 lvrltiekqg hpsptspvkp sspackpdsq selpltdrem eilnkttgls qsteglpdsm
      241 deevappkpp lpgirvvdns pppalppkkr qsapsptrva vvapmsrats gsslpvginr
      301 qdfdvdcyaq rrlsggshsy sgesprlspc ssigklsksd eqlssldrds gqcsrntsce
      361 tldhydpdye flqqdlsnad qipqqvacnl splpeslges gspflghplq lplgscpqpd
      421 gssapgqqtd vppalpekkr rsaasqtlds sgcrasyerh psqydnised dlqnpasvqs
      481 vpftpfaail pfqqggssas vdfmgdftvs estgdpekpp plpekknkhm laymqlledy
      541 sepqpsmfyq tpqkehvyqq knkllmevyg fndsfsagda phelapppal ppkqrqlesp
      601 aakdghsrdt tsagcvpgke grdsgdralk spdaseaqse eevdelslid hneimarltl
      661 kqegddgpdv rggsgdillv hatetdrkdl vlyceafltt yrtfitpeel ikklqyryek
      721 fspfadtfkk rvskntffvl vrvvdelclv elteeilkll melvfrlvrs gelslarvlr
      781 knildkvdqk kllrcansdq plaargvaar pgtlhdfhsh eiaeqltlld aelfykieip
      841 evllwakeqn eekspnltqf tehfnnmsyw vrsiimlqek aqdrerlllk fikimkhlrk
      901 lnnfnsylai lsaldsapir rlewqkqtse glaeyctlid ssssfrayra alseveppci
      961 pylglilqdl tfvhlgnpdl idgkvnfskr wqqfnildsm rcfqqvhydi rrnddiinff
     1021 ndfsdhlaee alwelslkik prnitrrktd reekt
//
LOCUS       XP_061010339             234 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133064367 [Dama dama].
ACCESSION   XP_061010339
VERSION     XP_061010339.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154356.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..234
                     /product="uncharacterized protein LOC133064367"
                     /calculated_mol_wt=24432
     CDS             1..234
                     /gene="LOC133064367"
                     /coded_by="XM_061154356.1:87..791"
                     /db_xref="GeneID:133064367"
ORIGIN      
        1 mdvldpllgr eavplqkvpa drvaacllyv ympdcsllfs llpcllppss vqqasyaass
       61 fssvsycvqq tkvaftpedg sagqgisvsv snsflsrhgs lpvpsyksvf rsysqdfvph
      121 sqasvqpflp stssssphfp pvhqsqssdl avppvaslpp stldgllsss qessfhgntv
      181 clpsetsftd spqtpsvrtq harlhtglpa pgkpppalaf eaiagvgpva lwlg
//
LOCUS       XP_061010340             725 aa            linear   MAM 02-DEC-2023
DEFINITION  protein O-mannosyl-transferase 1 isoform X1 [Dama dama].
ACCESSION   XP_061010340
VERSION     XP_061010340.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154357.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..725
                     /product="protein O-mannosyl-transferase 1 isoform X1"
                     /calculated_mol_wt=82664
     Region          20..267
                     /region_name="PMT"
                     /note="Dolichyl-phosphate-mannose-protein
                     mannosyltransferase; pfam02366"
                     /db_xref="CDD:396786"
     Region          299..493
                     /region_name="beta-trefoil_MIR_POMT1"
                     /note="MIR domain, beta-trefoil fold, found in protein
                     O-mannosyl-transferase 1 (POMT1) and similar proteins;
                     cd23281"
                     /db_xref="CDD:467752"
     Site            order(402,455,457,476,483)
                     /site_type="other"
                     /note="putative heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:467752"
     Region          522..716
                     /region_name="PMT_4TMC"
                     /note="C-terminal four TMM region of
                     protein-O-mannosyltransferase; pfam16192"
                     /db_xref="CDD:465056"
     CDS             1..725
                     /gene="POMT1"
                     /coded_by="XM_061154357.1:164..2341"
                     /db_xref="GeneID:133064368"
ORIGIN      
        1 mlgflqhpvv vtaevnlnmv altavgllsr lwqlayprav vfdevyygqy isfymkriff
       61 ldgsgppfgh mllalggylg gfdgnflwnr igaeyssnvp vwslrllpal sgalsvpmay
      121 eivwelgfsh caatgaallm lienalitqs rlmllesvli ffnllavlsy lkfsnsqkdr
      181 pfsprwwfwl vlsgmacsca vgikyvgvft yllvlgvaav hawhligdqt lsnvrvlchl
      241 laravalvvl pvlvyllffy ihllllyrsg phdqimssaf qaslegglar vtqgqpleva
      301 fgsqvtlknv fgqpvpcwlh shqstypmiy engrgsshqq qvtcypfkdv nnwwivkdpg
      361 rhqlvvnnpp rpvrhgdvvq lvhgmttrll nthdvaapls phaqevscyv dynismppqn
      421 lwrldivnre sdtdvwktil sevrfvhvnt sailklsgvp lpdwgfrqle vvgeklfwgy
      481 hestvwnvee hrygrsqeqk erelelhspt qvdisrnlsf marfselqwr mltvrsddse
      541 hkysstpldw vmldtniayw lhprtsaqih llgniviwas aslatlvyal lfvwyllrrr
      601 rrvcdlpedr wlrwvlagal caggwavnyl pfflmektlf lyhylpaltf qilllpvvle
      661 hvgdhlcrsq lqrslftalv vawftsachv snmlrpltyg drslspselk alrwkdswdi
      721 lirky
//
LOCUS       XP_061010341             706 aa            linear   MAM 02-DEC-2023
DEFINITION  protein O-mannosyl-transferase 1 isoform X2 [Dama dama].
ACCESSION   XP_061010341
VERSION     XP_061010341.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154358.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..706
                     /product="protein O-mannosyl-transferase 1 isoform X2"
                     /calculated_mol_wt=80767
     Region          20..267
                     /region_name="PMT"
                     /note="Dolichyl-phosphate-mannose-protein
                     mannosyltransferase; pfam02366"
                     /db_xref="CDD:396786"
     Region          286..474
                     /region_name="beta-trefoil_MIR_POMT1"
                     /note="MIR domain, beta-trefoil fold, found in protein
                     O-mannosyl-transferase 1 (POMT1) and similar proteins;
                     cd23281"
                     /db_xref="CDD:467752"
     Site            order(383,436,438,457,464)
                     /site_type="other"
                     /note="putative heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:467752"
     Region          503..697
                     /region_name="PMT_4TMC"
                     /note="C-terminal four TMM region of
                     protein-O-mannosyltransferase; pfam16192"
                     /db_xref="CDD:465056"
     CDS             1..706
                     /gene="POMT1"
                     /coded_by="XM_061154358.1:166..2286"
                     /db_xref="GeneID:133064368"
ORIGIN      
        1 mlgflqhpvv vtaevnlnmv altavgllsr lwqlayprav vfdevyygqy isfymkriff
       61 ldgsgppfgh mllalggylg gfdgnflwnr igaeyssnvp vwslrllpal sgalsvpmay
      121 eivwelgfsh caatgaallm lienalitqs rlmllesvli ffnllavlsy lkfsnsqkdr
      181 pfsprwwfwl vlsgmacsca vgikyvgvft yllvlgvaav hawhligdqt lsnvrvlchl
      241 laravalvvl pvlvyllffy ihllllyrsg phdqimssaf qaslevtlkn vfgqpvpcwl
      301 hshqstypmi yengrgsshq qqvtcypfkd vnnwwivkdp grhqlvvnnp prpvrhgdvv
      361 qlvhgmttrl lnthdvaapl sphaqevscy vdynismppq nlwrldivnr esdtdvwkti
      421 lsevrfvhvn tsailklsgv plpdwgfrql evvgeklfwg yhestvwnve ehrygrsqeq
      481 kerelelhsp tqvdisrnls fmarfselqw rmltvrsdds ehkysstpld wvmldtniay
      541 wlhprtsaqi hllgniviwa saslatlvya llfvwyllrr rrrvcdlped rwlrwvlaga
      601 lcaggwavny lpfflmektl flyhylpalt fqilllpvvl ehvgdhlcrs qlqrslftal
      661 vvawftsach vsnmlrplty gdrslspsel kalrwkdswd ilirky
//
LOCUS       XP_061010342             725 aa            linear   MAM 02-DEC-2023
DEFINITION  protein O-mannosyl-transferase 1 isoform X1 [Dama dama].
ACCESSION   XP_061010342
VERSION     XP_061010342.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154359.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..725
                     /product="protein O-mannosyl-transferase 1 isoform X1"
                     /calculated_mol_wt=82664
     Region          20..267
                     /region_name="PMT"
                     /note="Dolichyl-phosphate-mannose-protein
                     mannosyltransferase; pfam02366"
                     /db_xref="CDD:396786"
     Region          299..493
                     /region_name="beta-trefoil_MIR_POMT1"
                     /note="MIR domain, beta-trefoil fold, found in protein
                     O-mannosyl-transferase 1 (POMT1) and similar proteins;
                     cd23281"
                     /db_xref="CDD:467752"
     Site            order(402,455,457,476,483)
                     /site_type="other"
                     /note="putative heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:467752"
     Region          522..716
                     /region_name="PMT_4TMC"
                     /note="C-terminal four TMM region of
                     protein-O-mannosyltransferase; pfam16192"
                     /db_xref="CDD:465056"
     CDS             1..725
                     /gene="POMT1"
                     /coded_by="XM_061154359.1:196..2373"
                     /db_xref="GeneID:133064368"
ORIGIN      
        1 mlgflqhpvv vtaevnlnmv altavgllsr lwqlayprav vfdevyygqy isfymkriff
       61 ldgsgppfgh mllalggylg gfdgnflwnr igaeyssnvp vwslrllpal sgalsvpmay
      121 eivwelgfsh caatgaallm lienalitqs rlmllesvli ffnllavlsy lkfsnsqkdr
      181 pfsprwwfwl vlsgmacsca vgikyvgvft yllvlgvaav hawhligdqt lsnvrvlchl
      241 laravalvvl pvlvyllffy ihllllyrsg phdqimssaf qaslegglar vtqgqpleva
      301 fgsqvtlknv fgqpvpcwlh shqstypmiy engrgsshqq qvtcypfkdv nnwwivkdpg
      361 rhqlvvnnpp rpvrhgdvvq lvhgmttrll nthdvaapls phaqevscyv dynismppqn
      421 lwrldivnre sdtdvwktil sevrfvhvnt sailklsgvp lpdwgfrqle vvgeklfwgy
      481 hestvwnvee hrygrsqeqk erelelhspt qvdisrnlsf marfselqwr mltvrsddse
      541 hkysstpldw vmldtniayw lhprtsaqih llgniviwas aslatlvyal lfvwyllrrr
      601 rrvcdlpedr wlrwvlagal caggwavnyl pfflmektlf lyhylpaltf qilllpvvle
      661 hvgdhlcrsq lqrslftalv vawftsachv snmlrpltyg drslspselk alrwkdswdi
      721 lirky
//
LOCUS       XP_061010343             293 aa            linear   MAM 02-DEC-2023
DEFINITION  uridine-cytidine kinase 1 isoform X1 [Dama dama].
ACCESSION   XP_061010343
VERSION     XP_061010343.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154360.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..293
                     /product="uridine-cytidine kinase 1 isoform X1"
                     /calculated_mol_wt=33522
     Region          53..246
                     /region_name="UMPK"
                     /note="Uridine monophosphate kinase (UMPK, EC 2.7.1.48),
                     also known as uridine kinase or uridine-cytidine kinase
                     (UCK), catalyzes the reversible phosphoryl transfer from
                     ATP to uridine or cytidine to yield UMP or CMP. In the
                     primidine nucleotide-salvage pathway; cd02023"
                     /db_xref="CDD:238981"
     Site            order(53,184,231)
                     /site_type="other"
                     /note="ATP-binding site [chemical binding]"
                     /db_xref="CDD:238981"
     Site            order(81,105,185)
                     /site_type="active"
                     /note="Sugar specificity [active]"
                     /db_xref="CDD:238981"
     Site            order(84,102,131,133,136,192)
                     /site_type="active"
                     /note="Pyrimidine base specificity [active]"
                     /db_xref="CDD:238981"
     CDS             1..293
                     /gene="UCK1"
                     /coded_by="XM_061154360.1:77..958"
                     /db_xref="GeneID:133064369"
ORIGIN      
        1 mrssdagdgf gwrrrlrgrr arggppspaa lldrrerrhr erqggapvcv sqstvcekim
       61 ellgqkevdh rqrklvilsq drfykvltae qkakalkgqy nfdhpdafdn dlmhrtlkni
      121 vegktvevpt ydfvthsrla ettvvypadv vlfegilvfy sqeirdmfhl rlfvdtdsdv
      181 rlsrrvlrdv qrgrdleqil tqyttfvkpa feefclptkk yadviiprgv dnmvainliv
      241 qhiqdilngd ickwhrtgan grshkrtfpe pgehpavlas gkrshlesss rph
//
LOCUS       XP_061010344             277 aa            linear   MAM 02-DEC-2023
DEFINITION  uridine-cytidine kinase 1 isoform X2 [Dama dama].
ACCESSION   XP_061010344
VERSION     XP_061010344.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154361.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..277
                     /product="uridine-cytidine kinase 1 isoform X2"
                     /calculated_mol_wt=31109
     Region          25..230
                     /region_name="UMPK"
                     /note="Uridine monophosphate kinase (UMPK, EC 2.7.1.48),
                     also known as uridine kinase or uridine-cytidine kinase
                     (UCK), catalyzes the reversible phosphoryl transfer from
                     ATP to uridine or cytidine to yield UMP or CMP. In the
                     primidine nucleotide-salvage pathway; cd02023"
                     /db_xref="CDD:238981"
     Site            order(37,168,215)
                     /site_type="other"
                     /note="ATP-binding site [chemical binding]"
                     /db_xref="CDD:238981"
     Site            order(65,89,169)
                     /site_type="active"
                     /note="Sugar specificity [active]"
                     /db_xref="CDD:238981"
     Site            order(68,86,115,117,120,176)
                     /site_type="active"
                     /note="Pyrimidine base specificity [active]"
                     /db_xref="CDD:238981"
     CDS             1..277
                     /gene="UCK1"
                     /coded_by="XM_061154361.1:93..926"
                     /db_xref="GeneID:133064369"
ORIGIN      
        1 masagggdce gagpeadrph qrpfligvsg gtasgkstvc ekimellgqk evdhrqrklv
       61 ilsqdrfykv ltaeqkakal kgqynfdhpd afdndlmhrt lknivegktv evptydfvth
      121 srlaettvvy padvvlfegi lvfysqeird mfhlrlfvdt dsdvrlsrrv lrdvqrgrdl
      181 eqiltqyttf vkpafeefcl ptkkyadvii prgvdnmvai nlivqhiqdi lngdickwhr
      241 tgangrshkr tfpepgehpa vlasgkrshl esssrph
//
LOCUS       XP_061010345             254 aa            linear   MAM 02-DEC-2023
DEFINITION  uridine-cytidine kinase 1 isoform X3 [Dama dama].
ACCESSION   XP_061010345
VERSION     XP_061010345.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154362.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..254
                     /product="uridine-cytidine kinase 1 isoform X3"
                     /calculated_mol_wt=28511
     Region          25..207
                     /region_name="UMPK"
                     /note="Uridine monophosphate kinase (UMPK, EC 2.7.1.48),
                     also known as uridine kinase or uridine-cytidine kinase
                     (UCK), catalyzes the reversible phosphoryl transfer from
                     ATP to uridine or cytidine to yield UMP or CMP. In the
                     primidine nucleotide-salvage pathway; cd02023"
                     /db_xref="CDD:238981"
     Site            order(37,145,192)
                     /site_type="other"
                     /note="ATP-binding site [chemical binding]"
                     /db_xref="CDD:238981"
     Site            order(65,89,146)
                     /site_type="active"
                     /note="Sugar specificity [active]"
                     /db_xref="CDD:238981"
     Site            order(68,86,115,117,120,153)
                     /site_type="active"
                     /note="Pyrimidine base specificity [active]"
                     /db_xref="CDD:238981"
     CDS             1..254
                     /gene="UCK1"
                     /coded_by="XM_061154362.1:95..859"
                     /db_xref="GeneID:133064369"
ORIGIN      
        1 masagggdce gagpeadrph qrpfligvsg gtasgkstvc ekimellgqk evdhrqrklv
       61 ilsqdrfykv ltaeqkakal kgqynfdhpd afdndlmhrt lknivegktv evptydfvth
      121 ssqeirdmfh lrlfvdtdsd vrlsrrvlrd vqrgrdleqi ltqyttfvkp afeefclptk
      181 kyadviiprg vdnmvainli vqhiqdilng dickwhrtga ngrshkrtfp epgehpavla
      241 sgkrshless srph
//
LOCUS       XP_061010347            2236 aa            linear   MAM 02-DEC-2023
DEFINITION  protein PRRC2B isoform X1 [Dama dama].
ACCESSION   XP_061010347
VERSION     XP_061010347.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154364.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2236
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2236
                     /product="protein PRRC2B isoform X1"
                     /calculated_mol_wt=242138
     Region          2..189
                     /region_name="BAT2_N"
                     /note="BAT2 N-terminus; pfam07001"
                     /db_xref="CDD:462063"
     Region          1864..>2186
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     CDS             1..2236
                     /gene="PRRC2B"
                     /coded_by="XM_061154364.1:238..6948"
                     /db_xref="GeneID:133064370"
ORIGIN      
        1 msdrlgqitk gkdgkskyst lslfdkykgk svdsirssvi prhglqslgk vatarrmppp
       61 anlpslksen kgndpniviv pkdgtgwank qdqqdpksss vtasqppesl pqpglqksvs
      121 nlqkptqsis qentnsapgg pkswaqlngk paghegglra ssrllsfspe efptlkaagg
      181 qdkagkekgv ldlsygpgps lrpqnvtswr egggrniisa tslsasptel gsrnssagdg
      241 apssactsds kdpslrpaqp vrkgasqflg nvyhpptyhd mlpafmcspq ssenqgtver
      301 gsfplpqlrl eprvpfrqfq mndqdgkenr lgvsrpirpl rplvervprp tivnaenlkg
      361 lddldtdadd gwaglheevd yseklkfsdd eeeeevvkdg rpkwnswdpr rqrqlslssa
      421 dsadakrtqe egkdwsetgg vtrvvrkvpe pqppsrklhs wasgpdyqqk ssmgtvfrqq
      481 saedkedkpp prqkfvqsem seaverarkr reeeerrare erlaacaakl kqldqkckqa
      541 qraneaqkqa ekeaprspga ekvapqengp aihkgspefs aqetastfse evptappava
      601 qsggseegpr etgspaqefn kyqkslpprf qrqqqqqqqq eqlykmqhwq pvypppshpq
      661 rtfyphhpqm lgfdprwmmm psymdpripp artpvdfyps alhpsglmkp lmppdslsgt
      721 gcrsedqscv pplperkvta idpapvwspe gymalqskgy slphpkssds lamdmhvrse
      781 ssysaspgrs ggmsaqrell eergqeylsa sdkkapadcd srvssqrvgq ellfppqeng
      841 qeagtpvsht pnlrcsplep dfaptekkpe ygdwdvnhqs kvtdpdaave kevpreeppf
      901 svsswekegs pskppalepe wtpeargtss qhpeqtgrtr rsgpikkpvl kalkvedkek
      961 elekvkpela egstrlargt gpvheaaede dqendpalan aapatsedqg saraslgret
     1021 srpeednkpd gapearpsre ashtpptkrn nwifideeqa fgsrgpargr grgfreftfr
     1081 grptgsglcg ggvlgargly sgsqrsgrgr gprefgppdd fprakprrri asethsegse
     1141 yeelpkrrrq rgaepgdega lpereeatgr kgdfreswrs grmhpedhgg peaknrgpra
     1201 fgralpprls ncaygrktfa akevapwpsr gpgaswkepg ppdacgarrp ldrdyipdty
     1261 rrpdtlgsrg fedgrvedkr affqddhaad tenaenrpfr rrrpprqdkp prfrrlrqer
     1321 ealglwgped epslaagqwp grprpcpgdr ssatgrrspe layqnssdha neewetases
     1381 sdfnerrerr agpeldpqad ggppgvsage kkelakrsfs gqrplvdrqs rklepggfge
     1441 ksvrpgggdt spryeshqng tplkakrspd ealpgglgcg ngtghytler aahaasdvte
     1501 ascekaekea klatqrsgeq getmkpfdln yghaiiencg sspgeesevg slvgegfiev
     1561 ltkkqrrlle eerrkkeqav qvpvkgrsls sripprfakk qnnlcleqgd gpvpgsslgt
     1621 eiwesssqal plqastsdsw tkaataftst epgsaeqgfk ssqgdsgvdl saesressat
     1681 ssqrsspygt lkpeeasgpg lepkadghke qtqkqsepkd seqgsgqske hrpgpigner
     1741 slknrkgseg aerlqgavvp pvngveihvd svlpvppief gvnpkdsdfs lqpgsssgpv
     1801 gnpvvklqda lasnaglaps ipilrrdhhi qraiglshms fptadltlkm esarkawens
     1861 pnlpeqsspg gagsglqpps sggassgvsy ssfggvsmpp vpvasvapsa slpgshlppl
     1921 yldghvfasq prlvpqtipq qqsyqqvmpl rqaaaaqqip islhtslqaq aqlglrgglp
     1981 vsqsqeifss lqpfrsqvym hpslsppstm ilsggtalka pysafpgmqp lemvkpqsgs
     2041 pyqpmsgsqa lvyegplsqa aglgasqmld sqlpqltmpl pgsqlplpry gsgqqplllp
     2101 qsiqlpqaqs lsvgaprril apgsqpsvln tsressqmem kgfhfadskq nvpsggsvps
     2161 pqtyrpssas psgkpsgsav nmgsvqghyv qqakqrvdek pglgavklqe ppsaasplkr
     2221 tgaikpravk veeska
//
LOCUS       XP_061010348            2235 aa            linear   MAM 02-DEC-2023
DEFINITION  protein PRRC2B isoform X2 [Dama dama].
ACCESSION   XP_061010348
VERSION     XP_061010348.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154365.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2235
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2235
                     /product="protein PRRC2B isoform X2"
                     /calculated_mol_wt=242009
     Region          2..189
                     /region_name="BAT2_N"
                     /note="BAT2 N-terminus; pfam07001"
                     /db_xref="CDD:462063"
     Region          1863..>2185
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     CDS             1..2235
                     /gene="PRRC2B"
                     /coded_by="XM_061154365.1:238..6945"
                     /db_xref="GeneID:133064370"
ORIGIN      
        1 msdrlgqitk gkdgkskyst lslfdkykgk svdsirssvi prhglqslgk vatarrmppp
       61 anlpslksen kgndpniviv pkdgtgwank qdqqdpksss vtasqppesl pqpglqksvs
      121 nlqkptqsis qentnsapgg pkswaqlngk paghegglra ssrllsfspe efptlkaagg
      181 qdkagkekgv ldlsygpgps lrpqnvtswr egggrniisa tslsasptel gsrnssagdg
      241 apssactsds kdpslrpaqp vrkgasqflg nvyhpptyhd mlpafmcspq ssenqgtver
      301 gsfplpqlrl eprvpfrqfq mndqdgkenr lgvsrpirpl rplvervprp tivnaenlkg
      361 lddldtdadd gwaglheevd yseklkfsdd eeeeevvkdg rpkwnswdpr rqrqlslssa
      421 dsadakrtqe egkdwsetgg vtrvvrkvpe pqppsrklhs wasgpdyqks smgtvfrqqs
      481 aedkedkppp rqkfvqsems eaverarkrr eeeerraree rlaacaaklk qldqkckqaq
      541 raneaqkqae keaprspgae kvapqengpa ihkgspefsa qetastfsee vptappavaq
      601 sggseegpre tgspaqefnk yqkslpprfq rqqqqqqqqe qlykmqhwqp vypppshpqr
      661 tfyphhpqml gfdprwmmmp symdprippa rtpvdfypsa lhpsglmkpl mppdslsgtg
      721 crsedqscvp plperkvtai dpapvwspeg ymalqskgys lphpkssdsl amdmhvrses
      781 sysaspgrsg gmsaqrelle ergqeylsas dkkapadcds rvssqrvgqe llfppqengq
      841 eagtpvshtp nlrcsplepd faptekkpey gdwdvnhqsk vtdpdaavek evpreeppfs
      901 vsswekegsp skppalepew tpeargtssq hpeqtgrtrr sgpikkpvlk alkvedkeke
      961 lekvkpelae gstrlargtg pvheaaeded qendpalana apatsedqgs araslgrets
     1021 rpeednkpdg apearpsrea shtpptkrnn wifideeqaf gsrgpargrg rgfreftfrg
     1081 rptgsglcgg gvlgarglys gsqrsgrgrg prefgppddf prakprrria sethsegsey
     1141 eelpkrrrqr gaepgdegal pereeatgrk gdfreswrsg rmhpedhggp eaknrgpraf
     1201 gralpprlsn caygrktfaa kevapwpsrg pgaswkepgp pdacgarrpl drdyipdtyr
     1261 rpdtlgsrgf edgrvedkra ffqddhaadt enaenrpfrr rrpprqdkpp rfrrlrqere
     1321 alglwgpede pslaagqwpg rprpcpgdrs satgrrspel ayqnssdhan eewetasess
     1381 dfnerrerra gpeldpqadg gppgvsagek kelakrsfsg qrplvdrqsr klepggfgek
     1441 svrpgggdts pryeshqngt plkakrspde alpgglgcgn gtghytlera ahaasdvtea
     1501 scekaekeak latqrsgeqg etmkpfdlny ghaiiencgs spgeesevgs lvgegfievl
     1561 tkkqrrllee errkkeqavq vpvkgrslss ripprfakkq nnlcleqgdg pvpgsslgte
     1621 iwesssqalp lqastsdswt kaataftste pgsaeqgfks sqgdsgvdls aesressats
     1681 sqrsspygtl kpeeasgpgl epkadghkeq tqkqsepkds eqgsgqskeh rpgpigners
     1741 lknrkgsega erlqgavvpp vngveihvds vlpvppiefg vnpkdsdfsl qpgsssgpvg
     1801 npvvklqdal asnaglapsi pilrrdhhiq raiglshmsf ptadltlkme sarkawensp
     1861 nlpeqsspgg agsglqppss ggassgvsys sfggvsmppv pvasvapsas lpgshlpply
     1921 ldghvfasqp rlvpqtipqq qsyqqvmplr qaaaaqqipi slhtslqaqa qlglrgglpv
     1981 sqsqeifssl qpfrsqvymh pslsppstmi lsggtalkap ysafpgmqpl emvkpqsgsp
     2041 yqpmsgsqal vyegplsqaa glgasqmlds qlpqltmplp gsqlplpryg sgqqplllpq
     2101 siqlpqaqsl svgaprrila pgsqpsvlnt sressqmemk gfhfadskqn vpsggsvpsp
     2161 qtyrpssasp sgkpsgsavn mgsvqghyvq qakqrvdekp glgavklqep psaasplkrt
     2221 gaikpravkv eeska
//
LOCUS       XP_061010349            2235 aa            linear   MAM 02-DEC-2023
DEFINITION  protein PRRC2B isoform X3 [Dama dama].
ACCESSION   XP_061010349
VERSION     XP_061010349.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154366.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2235
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2235
                     /product="protein PRRC2B isoform X3"
                     /calculated_mol_wt=242009
     Region          2..189
                     /region_name="BAT2_N"
                     /note="BAT2 N-terminus; pfam07001"
                     /db_xref="CDD:462063"
     Region          1863..>2185
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     CDS             1..2235
                     /gene="PRRC2B"
                     /coded_by="XM_061154366.1:238..6945"
                     /db_xref="GeneID:133064370"
ORIGIN      
        1 msdrlgqitk gkdgkskyst lslfdkykgk svdsirssvi prhglqslgk vatarrmppp
       61 anlpslksen kgndpniviv pkdgtgwank qdqqdpksss vtasqppesl pqpglqksvs
      121 nlqkptqsis qentnsapgg pkswaqlngk paghegglra ssrllsfspe efptlkaagg
      181 qdkagkekgv ldlsygpgps lrpqnvtswr egggrniisa tslsasptel gsrnssagdg
      241 apssactsds kdpslrpaqp vrkgasqflg nvyhpptyhd mlpafmcspq ssenqgtver
      301 gsfplpqlrl eprvpfrqfq mndqdgkenr lgvsrpirpl rplvervprp tivnaenlkg
      361 lddldtdadd gwaglheevd yseklkfsdd eeeeevvkdg rpkwnswdpr rqrqlslssa
      421 dsadakrtqe egkdwsetgg vtrvvrkvpe pqppsrklhs wasgpdyqqk ssmgtvfrqq
      481 saedkedkpp prqkfvqsem seaverarkr reeeerrare erlaacaakl kqldqkckqa
      541 qraneaqkqa ekeaprspga ekvapqengp aihkgspefs aqetastfse evptappava
      601 qsggseegpr etgspaqefn kyqkslpprf qrqqqqqqqq eqlykmqhwq pvypppshpq
      661 rtfyphhpqm lgfdprwmmm psymdpripp artpvdfyps alhpsglmkp lmppdslsgt
      721 gcrsedqscv pplperkvta idpapvwspe gymalqskgy slphpkssds lamdmhvrse
      781 ssysaspgrs ggmsaqrell eergqeylsa sdkkapadcd srvssqrvgq ellfppqeng
      841 qeagtpvsht pnlrcsplep dfaptekkpe ygdwdvnhqs kvtdpdaave kevpreeppf
      901 svsswekegs pskppalepe wtpeargtss qhpeqtgrtr rsgpikkpvl kalkvedkek
      961 elekvkpela egstrlargt gpvheaaede dqendpalan aapatsedqg saraslgret
     1021 srpeednkpd gapearpsre ashtpptkrn nwifideeqa fgsrgpargr grgfreftfr
     1081 grptgsglcg ggvlgargly sgsqrsgrgr gprefgppdd fprakprrri asethsegse
     1141 yeelpkrrrq rgaepgdega lpereeatgr kgdfreswrs grmhpedhgg peaknrgpra
     1201 fgralpprls ncaygrktfa akevapwpsr gpgaswkepg ppdacgarrp ldrdyipdty
     1261 rrpdtlgsrg fedgrvedkr affqddhaad tenaenrpfr rrrpprqdkp prfrrlrqer
     1321 ealglwgped epslaagqwp grprpcpgdr ssatgrrspe layqnssdha neewetases
     1381 sdfnerrerr agpeldpqad ggppgvsage kkelakrsfs gqrplvdrqs rklepggfge
     1441 ksvrpgggdt spryeshqng tplkakrspd ealpgglgcg ngtghytler aahaasdvte
     1501 ascekaekea klatqrsgeq getmkpfdln yghaiiencg sspgeesevg slvgegfiev
     1561 ltkkqrrlle eerrkkeqav qvpvkgrsls sripprfakk qnnlcleqgd gpvpgsslgt
     1621 eiwesssqal plqastsdsw tkaataftst epgsaegfks sqgdsgvdls aesressats
     1681 sqrsspygtl kpeeasgpgl epkadghkeq tqkqsepkds eqgsgqskeh rpgpigners
     1741 lknrkgsega erlqgavvpp vngveihvds vlpvppiefg vnpkdsdfsl qpgsssgpvg
     1801 npvvklqdal asnaglapsi pilrrdhhiq raiglshmsf ptadltlkme sarkawensp
     1861 nlpeqsspgg agsglqppss ggassgvsys sfggvsmppv pvasvapsas lpgshlpply
     1921 ldghvfasqp rlvpqtipqq qsyqqvmplr qaaaaqqipi slhtslqaqa qlglrgglpv
     1981 sqsqeifssl qpfrsqvymh pslsppstmi lsggtalkap ysafpgmqpl emvkpqsgsp
     2041 yqpmsgsqal vyegplsqaa glgasqmlds qlpqltmplp gsqlplpryg sgqqplllpq
     2101 siqlpqaqsl svgaprrila pgsqpsvlnt sressqmemk gfhfadskqn vpsggsvpsp
     2161 qtyrpssasp sgkpsgsavn mgsvqghyvq qakqrvdekp glgavklqep psaasplkrt
     2221 gaikpravkv eeska
//
LOCUS       XP_061010350            2235 aa            linear   MAM 02-DEC-2023
DEFINITION  protein PRRC2B isoform X4 [Dama dama].
ACCESSION   XP_061010350
VERSION     XP_061010350.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154367.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2235
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2235
                     /product="protein PRRC2B isoform X4"
                     /calculated_mol_wt=242008
     Region          2..189
                     /region_name="BAT2_N"
                     /note="BAT2 N-terminus; pfam07001"
                     /db_xref="CDD:462063"
     Region          1863..>2185
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     CDS             1..2235
                     /gene="PRRC2B"
                     /coded_by="XM_061154367.1:238..6945"
                     /db_xref="GeneID:133064370"
ORIGIN      
        1 msdrlgqitk gkdgkskyst lslfdkykgk svdsirssvi prhglqslgk vatarrmppp
       61 anlpslksen kgndpniviv pkdgtgwank qdqqdpksss vtasqppesl pqpglqksvs
      121 nlqkptqsis qentnsapgg pkswaqlngk paghegglra ssrllsfspe efptlkaagg
      181 qdkagkekgv ldlsygpgps lrpqnvtswr egggrniisa tslsasptel gsrnssagdg
      241 apssactsds kdpslrpaqp vrkgasqflg nvyhpptyhd mlpafmcspq ssenqgtver
      301 gsfplpqlrl eprvpfrqfq mndqdgkenr lgvsrpirpl rplvervprp tivnaenlkg
      361 lddldtdadd gwaglheevd yseklkfsdd eeeeevvkdg rpkwnswdpr rqrqlslssa
      421 dsadakrtqe egkdwsetgg vtrvvrkvpe pqppsrklhs wasgpdyqqk ssmgtvfrqq
      481 saedkedkpp prqkfvqsem seaverarkr reeeerrare erlaacaakl kqldqkckqa
      541 qraneaqkqa ekeaprspga ekvapqengp aihkgspefs aqetastfse evptappava
      601 qsggseegpr etgspaqefn kyqkslpprf qrqqqqqqqq qlykmqhwqp vypppshpqr
      661 tfyphhpqml gfdprwmmmp symdprippa rtpvdfypsa lhpsglmkpl mppdslsgtg
      721 crsedqscvp plperkvtai dpapvwspeg ymalqskgys lphpkssdsl amdmhvrses
      781 sysaspgrsg gmsaqrelle ergqeylsas dkkapadcds rvssqrvgqe llfppqengq
      841 eagtpvshtp nlrcsplepd faptekkpey gdwdvnhqsk vtdpdaavek evpreeppfs
      901 vsswekegsp skppalepew tpeargtssq hpeqtgrtrr sgpikkpvlk alkvedkeke
      961 lekvkpelae gstrlargtg pvheaaeded qendpalana apatsedqgs araslgrets
     1021 rpeednkpdg apearpsrea shtpptkrnn wifideeqaf gsrgpargrg rgfreftfrg
     1081 rptgsglcgg gvlgarglys gsqrsgrgrg prefgppddf prakprrria sethsegsey
     1141 eelpkrrrqr gaepgdegal pereeatgrk gdfreswrsg rmhpedhggp eaknrgpraf
     1201 gralpprlsn caygrktfaa kevapwpsrg pgaswkepgp pdacgarrpl drdyipdtyr
     1261 rpdtlgsrgf edgrvedkra ffqddhaadt enaenrpfrr rrpprqdkpp rfrrlrqere
     1321 alglwgpede pslaagqwpg rprpcpgdrs satgrrspel ayqnssdhan eewetasess
     1381 dfnerrerra gpeldpqadg gppgvsagek kelakrsfsg qrplvdrqsr klepggfgek
     1441 svrpgggdts pryeshqngt plkakrspde alpgglgcgn gtghytlera ahaasdvtea
     1501 scekaekeak latqrsgeqg etmkpfdlny ghaiiencgs spgeesevgs lvgegfievl
     1561 tkkqrrllee errkkeqavq vpvkgrslss ripprfakkq nnlcleqgdg pvpgsslgte
     1621 iwesssqalp lqastsdswt kaataftste pgsaeqgfks sqgdsgvdls aesressats
     1681 sqrsspygtl kpeeasgpgl epkadghkeq tqkqsepkds eqgsgqskeh rpgpigners
     1741 lknrkgsega erlqgavvpp vngveihvds vlpvppiefg vnpkdsdfsl qpgsssgpvg
     1801 npvvklqdal asnaglapsi pilrrdhhiq raiglshmsf ptadltlkme sarkawensp
     1861 nlpeqsspgg agsglqppss ggassgvsys sfggvsmppv pvasvapsas lpgshlpply
     1921 ldghvfasqp rlvpqtipqq qsyqqvmplr qaaaaqqipi slhtslqaqa qlglrgglpv
     1981 sqsqeifssl qpfrsqvymh pslsppstmi lsggtalkap ysafpgmqpl emvkpqsgsp
     2041 yqpmsgsqal vyegplsqaa glgasqmlds qlpqltmplp gsqlplpryg sgqqplllpq
     2101 siqlpqaqsl svgaprrila pgsqpsvlnt sressqmemk gfhfadskqn vpsggsvpsp
     2161 qtyrpssasp sgkpsgsavn mgsvqghyvq qakqrvdekp glgavklqep psaasplkrt
     2221 gaikpravkv eeska
//
LOCUS       XP_061010351            2234 aa            linear   MAM 02-DEC-2023
DEFINITION  protein PRRC2B isoform X5 [Dama dama].
ACCESSION   XP_061010351
VERSION     XP_061010351.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154368.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2234
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2234
                     /product="protein PRRC2B isoform X5"
                     /calculated_mol_wt=241853
     Region          2..189
                     /region_name="BAT2_N"
                     /note="BAT2 N-terminus; pfam07001"
                     /db_xref="CDD:462063"
     Region          1862..>2184
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     CDS             1..2234
                     /gene="PRRC2B"
                     /coded_by="XM_061154368.1:238..6942"
                     /db_xref="GeneID:133064370"
ORIGIN      
        1 msdrlgqitk gkdgkskyst lslfdkykgk svdsirssvi prhglqslgk vatarrmppp
       61 anlpslksen kgndpniviv pkdgtgwank qdqqdpksss vtasqppesl pqpglqksvs
      121 nlqkptqsis qentnsapgg pkswaqlngk paghegglra ssrllsfspe efptlkaagg
      181 qdkagkekgv ldlsygpgps lrpqnvtswr egggrniisa tslsasptel gsrnssagdg
      241 apssactsds kdpslrpaqp vrkgasqflg nvyhpptyhd mlpafmcspq ssenqgtver
      301 gsfplpqlrl eprvpfrqfq mndqdgkenr lgvsrpirpl rplvervprp tivnaenlkg
      361 lddldtdadd gwaglheevd yseklkfsdd eeeeevvkdg rpkcwdprrq rqlslssads
      421 adakrtqeeg kdwsetggvt rvvrkvpepq ppsrklhswa sgpdyqqkss mgtvfrqqsa
      481 edkedkpppr qkfvqsemse averarkrre eeerrareer laacaaklkq ldqkckqaqr
      541 aneaqkqaek eaprspgaek vapqengpai hkgspefsaq etastfseev ptappavaqs
      601 ggseegpret gspaqefnky qkslpprfqr qqqqqqqqeq lykmqhwqpv ypppshpqrt
      661 fyphhpqmlg fdprwmmmps ymdprippar tpvdfypsal hpsglmkplm ppdslsgtgc
      721 rsedqscvpp lperkvtaid papvwspegy malqskgysl phpkssdsla mdmhvrsess
      781 ysaspgrsgg msaqrellee rgqeylsasd kkapadcdsr vssqrvgqel lfppqengqe
      841 agtpvshtpn lrcsplepdf aptekkpeyg dwdvnhqskv tdpdaaveke vpreeppfsv
      901 sswekegsps kppalepewt peargtssqh peqtgrtrrs gpikkpvlka lkvedkekel
      961 ekvkpelaeg strlargtgp vheaaededq endpalanaa patsedqgsa raslgretsr
     1021 peednkpdga pearpsreas htpptkrnnw ifideeqafg srgpargrgr gfreftfrgr
     1081 ptgsglcggg vlgarglysg sqrsgrgrgp refgppddfp rakprrrias ethsegseye
     1141 elpkrrrqrg aepgdegalp ereeatgrkg dfreswrsgr mhpedhggpe aknrgprafg
     1201 ralpprlsnc aygrktfaak evapwpsrgp gaswkepgpp dacgarrpld rdyipdtyrr
     1261 pdtlgsrgfe dgrvedkraf fqddhaadte naenrpfrrr rpprqdkppr frrlrqerea
     1321 lglwgpedep slaagqwpgr prpcpgdrss atgrrspela yqnssdhane ewetasessd
     1381 fnerrerrag peldpqadgg ppgvsagekk elakrsfsgq rplvdrqsrk lepggfgeks
     1441 vrpgggdtsp ryeshqngtp lkakrspdea lpgglgcgng tghytleraa haasdvteas
     1501 cekaekeakl atqrsgeqge tmkpfdlnyg haiiencgss pgeesevgsl vgegfievlt
     1561 kkqrrlleee rrkkeqavqv pvkgrslssr ipprfakkqn nlcleqgdgp vpgsslgtei
     1621 wesssqalpl qastsdswtk aataftstep gsaeqgfkss qgdsgvdlsa esressatss
     1681 qrsspygtlk peeasgpgle pkadghkeqt qkqsepkdse qgsgqskehr pgpignersl
     1741 knrkgsegae rlqgavvppv ngveihvdsv lpvppiefgv npkdsdfslq pgsssgpvgn
     1801 pvvklqdala snaglapsip ilrrdhhiqr aiglshmsfp tadltlkmes arkawenspn
     1861 lpeqsspgga gsglqppssg gassgvsyss fggvsmppvp vasvapsasl pgshlpplyl
     1921 dghvfasqpr lvpqtipqqq syqqvmplrq aaaaqqipis lhtslqaqaq lglrgglpvs
     1981 qsqeifsslq pfrsqvymhp slsppstmil sggtalkapy safpgmqple mvkpqsgspy
     2041 qpmsgsqalv yegplsqaag lgasqmldsq lpqltmplpg sqlplprygs gqqplllpqs
     2101 iqlpqaqsls vgaprrilap gsqpsvlnts ressqmemkg fhfadskqnv psggsvpspq
     2161 tyrpssasps gkpsgsavnm gsvqghyvqq akqrvdekpg lgavklqepp saasplkrtg
     2221 aikpravkve eska
//
LOCUS       XP_061010352            2233 aa            linear   MAM 02-DEC-2023
DEFINITION  protein PRRC2B isoform X6 [Dama dama].
ACCESSION   XP_061010352
VERSION     XP_061010352.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154369.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2233
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2233
                     /product="protein PRRC2B isoform X6"
                     /calculated_mol_wt=241835
     Region          2..189
                     /region_name="BAT2_N"
                     /note="BAT2 N-terminus; pfam07001"
                     /db_xref="CDD:462063"
     Region          1864..>2183
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     CDS             1..2233
                     /gene="PRRC2B"
                     /coded_by="XM_061154369.1:238..6939"
                     /db_xref="GeneID:133064370"
ORIGIN      
        1 msdrlgqitk gkdgkskyst lslfdkykgk svdsirssvi prhglqslgk vatarrmppp
       61 anlpslksen kgndpniviv pkdgtgwank qdqqdpksss vtasqppesl pqpglqksvs
      121 nlqkptqsis qentnsapgg pkswaqlngk paghegglra ssrllsfspe efptlkaagg
      181 qdkagkekgv ldlsygpgps lrpqnvtswr egggrniisa tslsasptel gsrnssagdg
      241 apssactsds kdpslrpaqp vrkgasqflg nvyhpptyhd mlpafmcspq ssenqgtver
      301 gsfplpqlrl eprvpfrqfq mndqdgkenr lgvsrpirpl rplvervprp tivnaenlkg
      361 lddldtdadd gwaglheevd yseklkfsdd eeeeevvkdg rpkwnswdpr rqrqlslssa
      421 dsadakrtqe egkdwsetgg vtrvvrkvpe pqppsrklhs wasgpdyqqk ssmgtvfrqq
      481 saedkedkpp prqkfvqsem seaverarkr reeeerrare erlaacaakl kqldqkckqa
      541 qraneaqkqa ekeaprspga ekvapqengp aihkgspefs aqetastfse evptappava
      601 qsggseegpr etgspaqefn kyqkslpprf qrqqqqqqqq eqlykmqhwq pvypppshpq
      661 rtfyphhpqm lgfdprwmmm psymdpripp artpvdfyps alhpsglmkp lmppdslsgt
      721 gcrsedqscv pplperkvta idpapvwspe gymalqskgy slphpkssds lamdmhvrse
      781 ssysaspgrs ggmsaqrell eergqeylsa sdkkapadcd srvssqrvgq ellfppqeng
      841 qeagtpvsht pnlrcsplep dfaptekkpe ygdwdvnhqs kvtdpdaave kevpreeppf
      901 svsswekegs pskppalepe wtpeargtss qhpeqtgrtr rsgpikkpvl kalkvedkek
      961 elekvkpela egstrlargt gpvheaaede dqendpalan aapatsedqg saraslgret
     1021 srpeednkpd gapearpsre ashtpptkrn nwifideeqa fgsrgpargr grgfreftfr
     1081 grptgsglcg ggvlgargly sgsqrsgrgr gprefgppdd fprakprrri asethsegse
     1141 yeelpkrrrq rgaepgdega lpereeatgr kgdfreswrs grmhpedhgg peaknrgpra
     1201 fgralpprls ncaygrktfa akevapwpsr gpgaswkepg ppdacgarrp ldrdyipdty
     1261 rrpdtlgsrg fedgrvedkr affqddhaad tenaenrpfr rrrpprqdkp prfrrlrqer
     1321 ealglwgped epslaagqwp grprpcpgdr ssatgrrspe layqnssdha neewetases
     1381 sdfnerrerr agpeldpqad ggppgvsage kkelakrsfs gqrplvdrqs rklepggfge
     1441 ksvrpgggdt spryeshqng tplkakrspd ealpgglgcg ngtghytler aahaasdvte
     1501 ascekaekea klatqrsgeq getmkpfdln yghaiiencg sspgeesevg slvgegfiev
     1561 ltkkqrrlle eerrkkeqav qvpvkgrsls sripprfakk qnnlcleqgd gpvpgsslgt
     1621 eiwesssqal plqastsdsw tkaataftst epgsaeqgfk ssqgdsgvdl saesressat
     1681 ssqrsspygt lkpeeasgpg lepkadghke qtqkqsepkd seqgsgqske hrpgpigner
     1741 slknrkgseg aerlqgavvp pvngveihvd svlpvppief gvnpkdsdfs lqpgsssgpv
     1801 gnpvvklqda lasnaglaps ipilrrdhhi qraiglshms fptadltlkm esarkawens
     1861 pnlpeqsspg gagsglqpps sggassgvsy ssfggvsmpp vpvasvapsa slpgshlppl
     1921 yldghvfasq prlvpqtipq qqsyqqvmpl rqaaaaqqip islhtslqaq aqlglrgglp
     1981 vsqsqeifss lqpfrsqvym hpslsppstm ilsggtalka pysafpgmqp lemvkpqsgs
     2041 pyqpmsgsqa lvyegplsqa aglgasqmld sqlpqltmpl pgsqlplpry gsgqqplllp
     2101 qsiqlpqaqs lsvgaprril apgsqpsvln tsrememkgf hfadskqnvp sggsvpspqt
     2161 yrpssaspsg kpsgsavnmg svqghyvqqa kqrvdekpgl gavklqepps aasplkrtga
     2221 ikpravkvee ska
//
LOCUS       XP_061010353            2230 aa            linear   MAM 02-DEC-2023
DEFINITION  protein PRRC2B isoform X7 [Dama dama].
ACCESSION   XP_061010353
VERSION     XP_061010353.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154370.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2230
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2230
                     /product="protein PRRC2B isoform X7"
                     /calculated_mol_wt=241413
     Region          2..189
                     /region_name="BAT2_N"
                     /note="BAT2 N-terminus; pfam07001"
                     /db_xref="CDD:462063"
     CDS             1..2230
                     /gene="PRRC2B"
                     /coded_by="XM_061154370.1:237..6929"
                     /db_xref="GeneID:133064370"
ORIGIN      
        1 msdrlgqitk gkdgkskyst lslfdkykgk svdsirssvi prhglqslgk vatarrmppp
       61 anlpslksen kgndpniviv pkdgtgwank qdqqdpksss vtasqppesl pqpglqksvs
      121 nlqkptqsis qentnsapgg pkswaqlngk paghegglra ssrllsfspe efptlkaagg
      181 qdkagkekgv ldlsygpgps lrpqnvtswr egggrniisa tslsasptel gsrnssagdg
      241 apssactsds kdpslrpaqp vrkgasqflg nvyhpptyhd mlpafmcspq ssenqgtver
      301 gsfplpqlrl eprvpfrqfq mndqdgkenr lgvsrpirpl rplvervprp tivnaenlkg
      361 lddldtdadd gwaglheevd yseklkfsdd eeeeevvkdg rpkwnswdpr rqrqlslssa
      421 dsadakrtqe egkdwsetgg vtrvvrkvpe pqppsrklhs wasgpdyqqk ssmgtvfrqq
      481 saedkedkpp prqkfvqsem seaverarkr reeeerrare erlaacaakl kqldqkckqa
      541 qraneaqkqa ekeaprspga ekvapqengp aihkgspefs aqetastfse evptappava
      601 qsggseegpr etgspaqefn kyqkslpprf qrqqqqqqqq eqlykmqhwq pvypppshpq
      661 rtfyphhpqm lgfdprwmmm psymdpripp artpvdfyps alhpsglmkp lmppdslsgt
      721 gcrsedqscv pplperkvta idpapvwspe gymalqskgy slphpkssds lamdmhvrse
      781 ssysaspgrs ggmsaqrell eergqeylsa sdkkapadcd srvssqrvgq ellfppqeng
      841 qeagtpvsht pnlrcsplep dfaptekkpe ygdwdvnhqs kvtdpdaave kevpreeppf
      901 svsswekegs pskppalepe wtpeargtss qhpeqtgrtr rsgpikkpvl kalkvedkek
      961 elekvkpela egstrlargt gpvheaaede dqendpalan aapatsedqg saraslgret
     1021 srpeednkpd gapearpsre ashtpptkrn nwifideeqa fgsrgpargr grgfreftfr
     1081 grptgsglcg ggvlgargly sgsqrsgrgr gprefgppdd fprakprrri asethsegse
     1141 yeelpkrrrq rgaepgdega lpereeatgr kgdfreswrs grmhpedhgg peaknrgpra
     1201 fgralpprls ncaygrktfa akevapwpsr gpgaswkepg ppdacgarrp ldrdyipdty
     1261 rrpdtlgsrg fedgrvedkr affqddhaad tenaenrpfr rrrpprqdkp prfrrlrqer
     1321 ealglwgped epslaagqwp grprpcpgdr ssatgrrspe layqnssdha neewetases
     1381 sdfnerrerr agpeldpqad ggppgvsage kkelakrsfs gqrplvdrqs rklepggfge
     1441 ksvrpgggdt spryeshqng tplkakrspd ealpgglgcg ngtghytler aahaasdvte
     1501 ascekaekea klatqrsgeq getmkpfdln yghaiiencg sspgeesevg slvgegfiev
     1561 ltkkqrrlle eerrkkeqav qvpvkgrsls sripprfakk qnnlcleqgd gpvpgsslgt
     1621 eiwesssqal plqastsdsw tkaataftst epgsaeqgfk ssqgdsgvdl saesressat
     1681 ssqrsspygt lkpeeasgpg lepkadghke qtqkqsepkd seqgsgqske hrpgpigner
     1741 slknrkgseg aerlqgavvp pvngveihvd svlpvppief gvnpkdsdfs lqpgsssgpv
     1801 gnpvvklqda lasnaglaps ipilrrdhhi qraiglshms fptadltlkm esarkawens
     1861 pnlpeqsspg gagsglqpps sggassgvsy ssfggvsmpp vpvasvapsa slpgshlppl
     1921 yldghvfasq prlvpqtipq qqsyqqaaaa qqipislhts lqaqaqlglr gglpvsqsqe
     1981 ifsslqpfrs qvymhpslsp pstmilsggt alkapysafp gmqplemvkp qsgspyqpms
     2041 gsqalvyegp lsqaaglgas qmldsqlpql tmplpgsqlp lprygsgqqp lllpqsiqlp
     2101 qaqslsvgap rrilapgsqp svlntsress qmemkgfhfa dskqnvpsgg svpspqtyrp
     2161 ssaspsgkps gsavnmgsvq ghyvqqakqr vdekpglgav klqeppsaas plkrtgaikp
     2221 ravkveeska
//
LOCUS       XP_061010354            2228 aa            linear   MAM 02-DEC-2023
DEFINITION  protein PRRC2B isoform X8 [Dama dama].
ACCESSION   XP_061010354
VERSION     XP_061010354.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154371.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2228
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2228
                     /product="protein PRRC2B isoform X8"
                     /calculated_mol_wt=241155
     Region          2..189
                     /region_name="BAT2_N"
                     /note="BAT2 N-terminus; pfam07001"
                     /db_xref="CDD:462063"
     CDS             1..2228
                     /gene="PRRC2B"
                     /coded_by="XM_061154371.1:237..6923"
                     /db_xref="GeneID:133064370"
ORIGIN      
        1 msdrlgqitk gkdgkskyst lslfdkykgk svdsirssvi prhglqslgk vatarrmppp
       61 anlpslksen kgndpniviv pkdgtgwank qdqqdpksss vtasqppesl pqpglqksvs
      121 nlqkptqsis qentnsapgg pkswaqlngk paghegglra ssrllsfspe efptlkaagg
      181 qdkagkekgv ldlsygpgps lrpqnvtswr egggrniisa tslsasptel gsrnssagdg
      241 apssactsds kdpslrpaqp vrkgasqflg nvyhpptyhd mlpafmcspq ssenqgtver
      301 gsfplpqlrl eprvpfrqfq mndqdgkenr lgvsrpirpl rplvervprp tivnaenlkg
      361 lddldtdadd gwaglheevd yseklkfsdd eeeeevvkdg rpkwnswdpr rqrqlslssa
      421 dsadakrtqe egkdwsetgg vtrvvrkvpe pqppsrklhs wasgpdyqks smgtvfrqqs
      481 aedkedkppp rqkfvqsems eaverarkrr eeeerraree rlaacaaklk qldqkckqaq
      541 raneaqkqae keaprspgae kvapqengpa ihkgspefsa qetastfsee vptappavaq
      601 sggseegpre tgspaqefnk yqkslpprfq rqqqqqqqqq lykmqhwqpv ypppshpqrt
      661 fyphhpqmlg fdprwmmmps ymdprippar tpvdfypsal hpsglmkplm ppdslsgtgc
      721 rsedqscvpp lperkvtaid papvwspegy malqskgysl phpkssdsla mdmhvrsess
      781 ysaspgrsgg msaqrellee rgqeylsasd kkapadcdsr vssqrvgqel lfppqengqe
      841 agtpvshtpn lrcsplepdf aptekkpeyg dwdvnhqskv tdpdaaveke vpreeppfsv
      901 sswekegsps kppalepewt peargtssqh peqtgrtrrs gpikkpvlka lkvedkekel
      961 ekvkpelaeg strlargtgp vheaaededq endpalanaa patsedqgsa raslgretsr
     1021 peednkpdga pearpsreas htpptkrnnw ifideeqafg srgpargrgr gfreftfrgr
     1081 ptgsglcggg vlgarglysg sqrsgrgrgp refgppddfp rakprrrias ethsegseye
     1141 elpkrrrqrg aepgdegalp ereeatgrkg dfreswrsgr mhpedhggpe aknrgprafg
     1201 ralpprlsnc aygrktfaak evapwpsrgp gaswkepgpp dacgarrpld rdyipdtyrr
     1261 pdtlgsrgfe dgrvedkraf fqddhaadte naenrpfrrr rpprqdkppr frrlrqerea
     1321 lglwgpedep slaagqwpgr prpcpgdrss atgrrspela yqnssdhane ewetasessd
     1381 fnerrerrag peldpqadgg ppgvsagekk elakrsfsgq rplvdrqsrk lepggfgeks
     1441 vrpgggdtsp ryeshqngtp lkakrspdea lpgglgcgng tghytleraa haasdvteas
     1501 cekaekeakl atqrsgeqge tmkpfdlnyg haiiencgss pgeesevgsl vgegfievlt
     1561 kkqrrlleee rrkkeqavqv pvkgrslssr ipprfakkqn nlcleqgdgp vpgsslgtei
     1621 wesssqalpl qastsdswtk aataftstep gsaeqgfkss qgdsgvdlsa esressatss
     1681 qrsspygtlk peeasgpgle pkadghkeqt qkqsepkdse qgsgqskehr pgpignersl
     1741 knrkgsegae rlqgavvppv ngveihvdsv lpvppiefgv npkdsdfslq pgsssgpvgn
     1801 pvvklqdala snaglapsip ilrrdhhiqr aiglshmsfp tadltlkmes arkawenspn
     1861 lpeqsspgga gsglqppssg gassgvsyss fggvsmppvp vasvapsasl pgshlpplyl
     1921 dghvfasqpr lvpqtipqqq syqqaaaaqq ipislhtslq aqaqlglrgg lpvsqsqeif
     1981 sslqpfrsqv ymhpslspps tmilsggtal kapysafpgm qplemvkpqs gspyqpmsgs
     2041 qalvyegpls qaaglgasqm ldsqlpqltm plpgsqlplp rygsgqqpll lpqsiqlpqa
     2101 qslsvgaprr ilapgsqpsv lntsressqm emkgfhfads kqnvpsggsv pspqtyrpss
     2161 aspsgkpsgs avnmgsvqgh yvqqakqrvd ekpglgavkl qeppsaaspl krtgaikpra
     2221 vkveeska
//
LOCUS       XP_061010355            2227 aa            linear   MAM 02-DEC-2023
DEFINITION  protein PRRC2B isoform X9 [Dama dama].
ACCESSION   XP_061010355
VERSION     XP_061010355.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154372.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2227
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2227
                     /product="protein PRRC2B isoform X9"
                     /calculated_mol_wt=241027
     Region          2..189
                     /region_name="BAT2_N"
                     /note="BAT2 N-terminus; pfam07001"
                     /db_xref="CDD:462063"
     CDS             1..2227
                     /gene="PRRC2B"
                     /coded_by="XM_061154372.1:238..6921"
                     /db_xref="GeneID:133064370"
ORIGIN      
        1 msdrlgqitk gkdgkskyst lslfdkykgk svdsirssvi prhglqslgk vatarrmppp
       61 anlpslksen kgndpniviv pkdgtgwank qdqqdpksss vtasqppesl pqpglqksvs
      121 nlqkptqsis qentnsapgg pkswaqlngk paghegglra ssrllsfspe efptlkaagg
      181 qdkagkekgv ldlsygpgps lrpqnvtswr egggrniisa tslsasptel gsrnssagdg
      241 apssactsds kdpslrpaqp vrkgasqflg nvyhpptyhd mlpafmcspq ssenqgtver
      301 gsfplpqlrl eprvpfrqfq mndqdgkenr lgvsrpirpl rplvervprp tivnaenlkg
      361 lddldtdadd gwaglheevd yseklkfsdd eeeeevvkdg rpkwnswdpr rqrqlslssa
      421 dsadakrtqe egkdwsetgg vtrvvrkvpe pqppsrklhs wasgpdyqks smgtvfrqqs
      481 aedkedkppp rqkfvqsems eaverarkrr eeeerraree rlaacaaklk qldqkckqaq
      541 raneaqkqae keaprspgae kvapqengpa ihkgspefsa qetastfsee vptappavaq
      601 sggseegpre tgspaqefnk yqkslpprfq rqqqqqqqqq lykmqhwqpv ypppshpqrt
      661 fyphhpqmlg fdprwmmmps ymdprippar tpvdfypsal hpsglmkplm ppdslsgtgc
      721 rsedqscvpp lperkvtaid papvwspegy malqskgysl phpkssdsla mdmhvrsess
      781 ysaspgrsgg msaqrellee rgqeylsasd kkapadcdsr vssqrvgqel lfppqengqe
      841 agtpvshtpn lrcsplepdf aptekkpeyg dwdvnhqskv tdpdaaveke vpreeppfsv
      901 sswekegsps kppalepewt peargtssqh peqtgrtrrs gpikkpvlka lkvedkekel
      961 ekvkpelaeg strlargtgp vheaaededq endpalanaa patsedqgsa raslgretsr
     1021 peednkpdga pearpsreas htpptkrnnw ifideeqafg srgpargrgr gfreftfrgr
     1081 ptgsglcggg vlgarglysg sqrsgrgrgp refgppddfp rakprrrias ethsegseye
     1141 elpkrrrqrg aepgdegalp ereeatgrkg dfreswrsgr mhpedhggpe aknrgprafg
     1201 ralpprlsnc aygrktfaak evapwpsrgp gaswkepgpp dacgarrpld rdyipdtyrr
     1261 pdtlgsrgfe dgrvedkraf fqddhaadte naenrpfrrr rpprqdkppr frrlrqerea
     1321 lglwgpedep slaagqwpgr prpcpgdrss atgrrspela yqnssdhane ewetasessd
     1381 fnerrerrag peldpqadgg ppgvsagekk elakrsfsgq rplvdrqsrk lepggfgeks
     1441 vrpgggdtsp ryeshqngtp lkakrspdea lpgglgcgng tghytleraa haasdvteas
     1501 cekaekeakl atqrsgeqge tmkpfdlnyg haiiencgss pgeesevgsl vgegfievlt
     1561 kkqrrlleee rrkkeqavqv pvkgrslssr ipprfakkqn nlcleqgdgp vpgsslgtei
     1621 wesssqalpl qastsdswtk aataftstep gsaegfkssq gdsgvdlsae sressatssq
     1681 rsspygtlkp eeasgpglep kadghkeqtq kqsepkdseq gsgqskehrp gpignerslk
     1741 nrkgsegaer lqgavvppvn gveihvdsvl pvppiefgvn pkdsdfslqp gsssgpvgnp
     1801 vvklqdalas naglapsipi lrrdhhiqra iglshmsfpt adltlkmesa rkawenspnl
     1861 peqsspggag sglqppssgg assgvsyssf ggvsmppvpv asvapsaslp gshlpplyld
     1921 ghvfasqprl vpqtipqqqs yqqaaaaqqi pislhtslqa qaqlglrggl pvsqsqeifs
     1981 slqpfrsqvy mhpslsppst milsggtalk apysafpgmq plemvkpqsg spyqpmsgsq
     2041 alvyegplsq aaglgasqml dsqlpqltmp lpgsqlplpr ygsgqqplll pqsiqlpqaq
     2101 slsvgaprri lapgsqpsvl ntsressqme mkgfhfadsk qnvpsggsvp spqtyrpssa
     2161 spsgkpsgsa vnmgsvqghy vqqakqrvde kpglgavklq eppsaasplk rtgaikprav
     2221 kveeska
//
LOCUS       XP_061010356            2178 aa            linear   MAM 02-DEC-2023
DEFINITION  protein PRRC2B isoform X10 [Dama dama].
ACCESSION   XP_061010356
VERSION     XP_061010356.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154373.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2178
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2178
                     /product="protein PRRC2B isoform X10"
                     /calculated_mol_wt=236436
     Region          2..189
                     /region_name="BAT2_N"
                     /note="BAT2 N-terminus; pfam07001"
                     /db_xref="CDD:462063"
     CDS             1..2178
                     /gene="PRRC2B"
                     /coded_by="XM_061154373.1:238..6774"
                     /db_xref="GeneID:133064370"
ORIGIN      
        1 msdrlgqitk gkdgkskyst lslfdkykgk svdsirssvi prhglqslgk vatarrmppp
       61 anlpslksen kgndpniviv pkdgtgwank qdqqdpksss vtasqppesl pqpglqksvs
      121 nlqkptqsis qentnsapgg pkswaqlngk paghegglra ssrllsfspe efptlkaagg
      181 qdkagkekgv ldlsygpgps lrpqnvtswr egggrniisa tslsasptel gsrnssagdg
      241 apssactsds kdpslrpaqp vrkgasqflg nvyhpptyhd mlpafmcspq ssenqgtver
      301 gsfplpqlrl eprvpfrqfq mndqdgkenr lgvsrpirpl rplvervprp tivnaenlkg
      361 lddldtdadd gwaglheevd yseklkfsdd eeeeevvkdg rpkwnswdpr rqrqlslssa
      421 dsadakrtqe egkdwsetgg vtrvvrkvpe pqppsrklhs wasgpdyqqk ssmgtvfrqq
      481 saedkedkpp prqkfvqsem seaverarkr reeeerrare erlaacaakl kqldqkckqa
      541 qraneaqkqa ekeaprspga ekvapqengp aihkgspefs aqetastfse evptappava
      601 qsggseegpr etgspaqefn kyqkslpprf qrqqqqqqqq eqlykmqhwq pvypppshpq
      661 rtfyphhpqm lgfdprwmmm psymdpripp artpvdfyps alhpsglmkp lmppdslsgt
      721 gcrsedqscv pplperkvta idpapvwspe gymalqskgy slphpkssds lamdmhvrse
      781 ssysaspgrs ggmsaqrell eergqeylsa sdkkapadcd srvssqrvgq ellfppqeng
      841 qeagtpvsht pnlrcsplep dfaptekkpe ygdwdvnhqs kvtdpdaave kevpreeppf
      901 svsswekegs pskppalepe wtpeargtss qhpeqtgrtr rsgpikkpvl kalkvedkek
      961 elekvkpela egstrlargt gpvheaaede dqendpalan aapatsedqg saraslgret
     1021 srpeednkpd gapearpsre ashtpptkrn nwifideeqa fgsrgpargr grgfreftfr
     1081 grptgsglcg ggvlgargly sgsqrsgrgr gprefgppdd fprakprrri asethsegse
     1141 yeelpkrrrq rgaepgdega lpereeatgr kgdfreswrs grmhpedhgg peaknrgpra
     1201 fgralpprls ncaygrktfa akevapwpsr gpgaswkepg ppdacgarrp ldrdyipdty
     1261 rrpdtlgsrg fedgrvedkr affqddhaad tenaenrpfr rrrpprqdkp prfrrlrqer
     1321 ealglwgped epslaagqwp grprpcpgdr ssatgrrspe layqnssdha neewetases
     1381 sdfnerrerr agpeldpqad ggppgvsage kkelakrsfs gqrplvdrqs rklepggfge
     1441 ksvrpgggdt spryeshqng tplkakrspd ealpgglgcg ngtghytler aahaasdvte
     1501 ascekaekea klatqrsgeq getmkpfdln yghaiiencg sspgeesevg slvgegfiev
     1561 ltkkqrrlle eerrkkeqav qvpvkgrsls sripprfakk qnnlcleqgd gpvpgsslgt
     1621 eiwesssqal plqastsdsw tkaataftst epgsaeqgfk ssqgdsgvdl saesressat
     1681 ssqrsspygt lkpeeasgpg lepkadghke qtqkqsepkd seqgsgqske hrpgpigner
     1741 slknrkgseg aerlqgavvp pvngveihvd svlpvppief gvnpkdsdfs lqpgsssgpv
     1801 gnpvvklqda lasnaglaps ipilrrdhhi qraiglshms fptadltlkm esarkawens
     1861 pnlpeqsspg gagsglqpps sggassgvsy ssfggvsmpp vpvasvapsa slpgshlppl
     1921 yldghvfasq prlvpqtipq qqsyqqvmpl rqaaaaqqip islhtslqaq aqlglrgglp
     1981 vsqsqeifss lqpfrsqvym hpslsppstm ilsggtalka pysafpgmqp lemvkpqsgs
     2041 pyqpmsgsqa lvyegplsqa aglgasqmld sqlpqltmpl pgsqlplpry gsgqqplllp
     2101 qsiqlpqaqs lsvgaprril apgsqpsvln tsressqmem kgfhfadskq nvpsggsvps
     2161 pqtyrqssew mkspawep
//
LOCUS       XP_061010358            2175 aa            linear   MAM 02-DEC-2023
DEFINITION  protein PRRC2B isoform X11 [Dama dama].
ACCESSION   XP_061010358
VERSION     XP_061010358.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154375.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2175
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2175
                     /product="protein PRRC2B isoform X11"
                     /calculated_mol_wt=236134
     Region          2..189
                     /region_name="BAT2_N"
                     /note="BAT2 N-terminus; pfam07001"
                     /db_xref="CDD:462063"
     CDS             1..2175
                     /gene="PRRC2B"
                     /coded_by="XM_061154375.1:238..6765"
                     /db_xref="GeneID:133064370"
ORIGIN      
        1 msdrlgqitk gkdgkskyst lslfdkykgk svdsirssvi prhglqslgk vatarrmppp
       61 anlpslksen kgndpniviv pkdgtgwank qdqqdpksss vtasqppesl pqpglqksvs
      121 nlqkptqsis qentnsapgg pkswaqlngk paghegglra ssrllsfspe efptlkaagg
      181 qdkagkekgv ldlsygpgps lrpqnvtswr egggrniisa tslsasptel gsrnssagdg
      241 apssactsds kdpslrpaqp vrkgasqflg nvyhpptyhd mlpafmcspq ssenqgtver
      301 gsfplpqlrl eprvpfrqfq mndqdgkenr lgvsrpirpl rplvervprp tivnaenlkg
      361 lddldtdadd gwaglheevd yseklkfsdd eeeeevvkdg rpkwnswdpr rqrqlslssa
      421 dsadakrtqe egkdwsetgg vtrvvrkvpe pqppsrklhs wasgpdyqqk ssmgtvfrqq
      481 saedkedkpp prqkfvqsem seaverarkr reeeerrare erlaacaakl kqldqkckqa
      541 qraneaqkqa ekeaprspga ekvapqengp aihkgspefs aqetastfse evptappava
      601 qsggseegpr etgspaqefn kyqkslpprf qrqqqqqqqq eqlykmqhwq pvypppshpq
      661 rtfyphhpqm lgfdprwmmm psymdpripp artpvdfyps alhpsglmkp lmppdslsgt
      721 gcrsedqscv pplperkvta idpapvwspe gymalqskgy slphpkssds lamdmhvrse
      781 ssysaspgrs ggmsaqrell eergqeylsa sdkkapadcd srvssqrvgq ellfppqeng
      841 qeagtpvsht pnlrcsplep dfaptekkpe ygdwdvnhqs kvtdpdaave kevpreeppf
      901 svsswekegs pskppalepe wtpeargtss qhpeqtgrtr rsgpikkpvl kalkvedkek
      961 elekvkpela egstrlargt gpvheaaede dqendpalan aapatsedqg saraslgret
     1021 srpeednkpd gapearpsre ashtpptkrn nwifideeqa fgsrgpargr grgfreftfr
     1081 grptgsglcg ggvlgargly sgsqrsgrgr gprefgppdd fprakprrri asethsegse
     1141 yeelpkrrrq rgaepgdega lpereeatgr kgdfreswrs grmhpedhgg peaknrgpra
     1201 fgralpprls ncaygrktfa akevapwpsr gpgaswkepg ppdacgarrp ldrdyipdty
     1261 rrpdtlgsrg fedgrvedkr affqddhaad tenaenrpfr rrrpprqdkp prfrrlrqer
     1321 ealglwgped epslaagqwp grprpcpgdr ssatgrrspe layqnssdha neewetases
     1381 sdfnerrerr agpeldpqad ggppgvsage kkelakrsfs gqrplvdrqs rklepggfge
     1441 ksvrpgggdt spryeshqng tplkakrspd ealpgglgcg ngtghytler aahaasdvte
     1501 ascekaekea klatqrsgeq getmkpfdln yghaiiencg sspgeesevg slvgegfiev
     1561 ltkkqrrlle eerrkkeqav qvpvkgrsls sripprfakk qnnlcleqgd gpvpgsslgt
     1621 eiwesssqal plqastsdsw tkaataftst epgsaeqgfk ssqgdsgvdl saesressat
     1681 ssqrsspygt lkpeeasgpg lepkadghke qtqkqsepkd seqgsgqske hrpgpigner
     1741 slknrkgseg aerlqgavvp pvngveihvd svlpvppief gvnpkdsdfs lqpgsssgpv
     1801 gnpvvklqda lasnaglaps ipilrrdhhi qraiglshms fptadltlkm esarkawens
     1861 pnlpeqsspg gagsglqpps sggassgvsy ssfggvsmpp vpvasvapsa slpgshlppl
     1921 yldghvfasq prlvpqtipq qqsyqqvmpl rqaaaaqqip islhtslqaq aqlglrgglp
     1981 vsqsqeifss lqpfrsqvym hpslsppstm ilsggtalka pysafpgmqp lemvkpqsgs
     2041 pyqpmsgsqa lvyegplsqa aglgasqmld sqlpqltmpl pgsqlplpry gsgqqplllp
     2101 qsiqlpqaqs lsvgaprril apgsqpsvln tsrememkgf hfadskqnvp sggsvpspqt
     2161 yrqssewmks pawep
//
LOCUS       XP_061010359            2169 aa            linear   MAM 02-DEC-2023
DEFINITION  protein PRRC2B isoform X12 [Dama dama].
ACCESSION   XP_061010359
VERSION     XP_061010359.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154376.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2169
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2169
                     /product="protein PRRC2B isoform X12"
                     /calculated_mol_wt=235326
     Region          2..189
                     /region_name="BAT2_N"
                     /note="BAT2 N-terminus; pfam07001"
                     /db_xref="CDD:462063"
     CDS             1..2169
                     /gene="PRRC2B"
                     /coded_by="XM_061154376.1:238..6747"
                     /db_xref="GeneID:133064370"
ORIGIN      
        1 msdrlgqitk gkdgkskyst lslfdkykgk svdsirssvi prhglqslgk vatarrmppp
       61 anlpslksen kgndpniviv pkdgtgwank qdqqdpksss vtasqppesl pqpglqksvs
      121 nlqkptqsis qentnsapgg pkswaqlngk paghegglra ssrllsfspe efptlkaagg
      181 qdkagkekgv ldlsygpgps lrpqnvtswr egggrniisa tslsasptel gsrnssagdg
      241 apssactsds kdpslrpaqp vrkgasqflg nvyhpptyhd mlpafmcspq ssenqgtver
      301 gsfplpqlrl eprvpfrqfq mndqdgkenr lgvsrpirpl rplvervprp tivnaenlkg
      361 lddldtdadd gwaglheevd yseklkfsdd eeeeevvkdg rpkwnswdpr rqrqlslssa
      421 dsadakrtqe egkdwsetgg vtrvvrkvpe pqppsrklhs wasgpdyqks smgtvfrqqs
      481 aedkedkppp rqkfvqsems eaverarkrr eeeerraree rlaacaaklk qldqkckqaq
      541 raneaqkqae keaprspgae kvapqengpa ihkgspefsa qetastfsee vptappavaq
      601 sggseegpre tgspaqefnk yqkslpprfq rqqqqqqqqq lykmqhwqpv ypppshpqrt
      661 fyphhpqmlg fdprwmmmps ymdprippar tpvdfypsal hpsglmkplm ppdslsgtgc
      721 rsedqscvpp lperkvtaid papvwspegy malqskgysl phpkssdsla mdmhvrsess
      781 ysaspgrsgg msaqrellee rgqeylsasd kkapadcdsr vssqrvgqel lfppqengqe
      841 agtpvshtpn lrcsplepdf aptekkpeyg dwdvnhqskv tdpdaaveke vpreeppfsv
      901 sswekegsps kppalepewt peargtssqh peqtgrtrrs gpikkpvlka lkvedkekel
      961 ekvkpelaeg strlargtgp vheaaededq endpalanaa patsedqgsa raslgretsr
     1021 peednkpdga pearpsreas htpptkrnnw ifideeqafg srgpargrgr gfreftfrgr
     1081 ptgsglcggg vlgarglysg sqrsgrgrgp refgppddfp rakprrrias ethsegseye
     1141 elpkrrrqrg aepgdegalp ereeatgrkg dfreswrsgr mhpedhggpe aknrgprafg
     1201 ralpprlsnc aygrktfaak evapwpsrgp gaswkepgpp dacgarrpld rdyipdtyrr
     1261 pdtlgsrgfe dgrvedkraf fqddhaadte naenrpfrrr rpprqdkppr frrlrqerea
     1321 lglwgpedep slaagqwpgr prpcpgdrss atgrrspela yqnssdhane ewetasessd
     1381 fnerrerrag peldpqadgg ppgvsagekk elakrsfsgq rplvdrqsrk lepggfgeks
     1441 vrpgggdtsp ryeshqngtp lkakrspdea lpgglgcgng tghytleraa haasdvteas
     1501 cekaekeakl atqrsgeqge tmkpfdlnyg haiiencgss pgeesevgsl vgegfievlt
     1561 kkqrrlleee rrkkeqavqv pvkgrslssr ipprfakkqn nlcleqgdgp vpgsslgtei
     1621 wesssqalpl qastsdswtk aataftstep gsaegfkssq gdsgvdlsae sressatssq
     1681 rsspygtlkp eeasgpglep kadghkeqtq kqsepkdseq gsgqskehrp gpignerslk
     1741 nrkgsegaer lqgavvppvn gveihvdsvl pvppiefgvn pkdsdfslqp gsssgpvgnp
     1801 vvklqdalas naglapsipi lrrdhhiqra iglshmsfpt adltlkmesa rkawenspnl
     1861 peqsspggag sglqppssgg assgvsyssf ggvsmppvpv asvapsaslp gshlpplyld
     1921 ghvfasqprl vpqtipqqqs yqqaaaaqqi pislhtslqa qaqlglrggl pvsqsqeifs
     1981 slqpfrsqvy mhpslsppst milsggtalk apysafpgmq plemvkpqsg spyqpmsgsq
     2041 alvyegplsq aaglgasqml dsqlpqltmp lpgsqlplpr ygsgqqplll pqsiqlpqaq
     2101 slsvgaprri lapgsqpsvl ntsressqme mkgfhfadsk qnvpsggsvp spqtyrqsse
     2161 wmkspawep
//
LOCUS       XP_061010360            1961 aa            linear   MAM 02-DEC-2023
DEFINITION  protein PRRC2B isoform X13 [Dama dama].
ACCESSION   XP_061010360
VERSION     XP_061010360.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154377.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1961
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1961
                     /product="protein PRRC2B isoform X13"
                     /calculated_mol_wt=213235
     Region          1589..>1911
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     CDS             1..1961
                     /gene="PRRC2B"
                     /coded_by="XM_061154377.1:188..6073"
                     /db_xref="GeneID:133064370"
ORIGIN      
        1 mgqdqasalr mcspqssenq gtvergsfpl pqlrleprvp frqfqmndqd gkenrlgvsr
       61 pirplrplve rvprptivna enlkglddld tdaddgwagl heevdysekl kfsddeeeee
      121 vvkdgrpkwn swdprrqrql slssadsada krtqeegkdw setggvtrvv rkvpepqpps
      181 rklhswasgp dyqqkssmgt vfrqqsaedk edkppprqkf vqsemseave rarkrreeee
      241 rrareerlaa caaklkqldq kckqaqrane aqkqaekeap rspgaekvap qengpaihkg
      301 spefsaqeta stfseevpta ppavaqsggs eegpretgsp aqefnkyqks lpprfqrqqq
      361 qqqqqeqlyk mqhwqpvypp pshpqrtfyp hhpqmlgfdp rwmmmpsymd prippartpv
      421 dfypsalhps glmkplmppd slsgtgcrse dqscvpplpe rkvtaidpap vwspegymal
      481 qskgyslphp kssdslamdm hvrsessysa spgrsggmsa qrelleergq eylsasdkka
      541 padcdsrvss qrvgqellfp pqengqeagt pvshtpnlrc splepdfapt ekkpeygdwd
      601 vnhqskvtdp daavekevpr eeppfsvssw ekegspskpp alepewtpea rgtssqhpeq
      661 tgrtrrsgpi kkpvlkalkv edkekelekv kpelaegstr largtgpvhe aaededqend
      721 palanaapat sedqgsaras lgretsrpee dnkpdgapea rpsreashtp ptkrnnwifi
      781 deeqafgsrg pargrgrgfr eftfrgrptg sglcgggvlg arglysgsqr sgrgrgpref
      841 gppddfprak prrriaseth segseyeelp krrrqrgaep gdegalpere eatgrkgdfr
      901 eswrsgrmhp edhggpeakn rgprafgral pprlsncayg rktfaakeva pwpsrgpgas
      961 wkepgppdac garrpldrdy ipdtyrrpdt lgsrgfedgr vedkraffqd dhaadtenae
     1021 nrpfrrrrpp rqdkpprfrr lrqerealgl wgpedepsla agqwpgrprp cpgdrssatg
     1081 rrspelayqn ssdhaneewe tasessdfne rrerragpel dpqadggppg vsagekkela
     1141 krsfsgqrpl vdrqsrklep ggfgeksvrp gggdtsprye shqngtplka krspdealpg
     1201 glgcgngtgh ytleraahaa sdvteascek aekeaklatq rsgeqgetmk pfdlnyghai
     1261 iencgsspge esevgslvge gfievltkkq rrlleeerrk keqavqvpvk grslssripp
     1321 rfakkqnnlc leqgdgpvpg sslgteiwes ssqalplqas tsdswtkaat aftstepgsa
     1381 eqgfkssqgd sgvdlsaesr essatssqrs spygtlkpee asgpglepka dghkeqtqkq
     1441 sepkdseqgs gqskehrpgp ignerslknr kgsegaerlq gavvppvngv eihvdsvlpv
     1501 ppiefgvnpk dsdfslqpgs ssgpvgnpvv klqdalasna glapsipilr rdhhiqraig
     1561 lshmsfptad ltlkmesark awenspnlpe qsspggagsg lqppssggas sgvsyssfgg
     1621 vsmppvpvas vapsaslpgs hlpplyldgh vfasqprlvp qtipqqqsyq qvmplrqaaa
     1681 aqqipislht slqaqaqlgl rgglpvsqsq eifsslqpfr sqvymhpsls ppstmilsgg
     1741 talkapysaf pgmqplemvk pqsgspyqpm sgsqalvyeg plsqaaglga sqmldsqlpq
     1801 ltmplpgsql plprygsgqq plllpqsiql pqaqslsvga prrilapgsq psvlntsres
     1861 sqmemkgfhf adskqnvpsg gsvpspqtyr pssaspsgkp sgsavnmgsv qghyvqqakq
     1921 rvdekpglga vklqeppsaa splkrtgaik pravkveesk a
//
LOCUS       XP_061010361            1949 aa            linear   MAM 02-DEC-2023
DEFINITION  protein PRRC2B isoform X14 [Dama dama].
ACCESSION   XP_061010361
VERSION     XP_061010361.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154378.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1949
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1949
                     /product="protein PRRC2B isoform X14"
                     /calculated_mol_wt=212086
     Region          2..189
                     /region_name="BAT2_N"
                     /note="BAT2 N-terminus; pfam07001"
                     /db_xref="CDD:462063"
     CDS             1..1949
                     /gene="PRRC2B"
                     /coded_by="XM_061154378.1:239..6088"
                     /db_xref="GeneID:133064370"
ORIGIN      
        1 msdrlgqitk gkdgkskyst lslfdkykgk svdsirssvi prhglqslgk vatarrmppp
       61 anlpslksen kgndpniviv pkdgtgwank qdqqdpksss vtasqppesl pqpglqksvs
      121 nlqkptqsis qentnsapgg pkswaqlngk paghegglra ssrllsfspe efptlkaagg
      181 qdkagkekgv ldlsygpgps lrpqnvtswr egggrniisa tslsasptel gsrnssagdg
      241 apssactsds kdpslrpaqp vrkgasqflg nvyhpptyhd mlpafmcspq ssenqgtver
      301 gsfplpqlrl eprvpfrqfq mndqdgkenr lgvsrpirpl rplvervprp tivnaenlkg
      361 lddldtdadd gwaglheevd yseklkfsdd eeeeevvkdg rpkwnswdpr rqrqlslssa
      421 dsadakrtqe egkdwsetgg vtrvvrkvpe pqppsrklhs wasgpdyqqk ssmgtvfrqq
      481 saedkedkpp prqkfvqsem seaverarkr reeeerrare erlaacaakl kqldqkckqa
      541 qraneaqkqa ekeaprspga ekvapqengp aihkgspefs aqetastfse evptappava
      601 qsggseegpr etgspaqefn kyqkslpprf qrqqqqqqqq eqlykmqhwq pvypppshpq
      661 rtfyphhpqm lgfdprwmmm psymdpripp artpvdfyps alhpsglmkp lmppdslsgt
      721 gcrsedqscv pplperkvta idpapvwspe gymalqskgy slphpkssds lamdmhvrse
      781 ssysaspgrs ggmsaqrell eergqeylsa sdkkapadcd srvssqrvgq ellfppqeng
      841 qeagtpvsht pnlrcsplep dfaptekkpe ygdwdvnhqs kvtdpdaave kevpreeppf
      901 svsswekegs pskppalepe wtpeargtss qhpeqtgrtr rsgpikkpvl kalkvedkek
      961 elekvkpela egstrlargt gpvheaaede dqendpalan aapatsedqg saraslgret
     1021 srpeednkpd gapearpsre ashtpptkrn nwifideeqa fgsrgpargr grgfreftfr
     1081 grptgsglcg ggvlgargly sgsqrsgrgr gprefgppdd fprakprrri asethsegse
     1141 yeelpkrrrq rgaepgdega lpereeatgr kgdfreswrs grmhpedhgg peaknrgpra
     1201 fgralpprls ncaygrktfa akevapwpsr gpgaswkepg ppdacgarrp ldrdyipdty
     1261 rrpdtlgsrg fedgrvedkr affqddhaad tenaenrpfr rrrpprqdkp prfrrlrqer
     1321 ealglwgped epslaagqwp grprpcpgdr ssatgrrspe layqnssdha neewetases
     1381 sdfnerrerr agpeldpqad ggppgvsage kkelakrsfs gqrplvdrqs rklepggfge
     1441 ksvrpgggdt spryeshqng tplkakrspd ealpgglgcg ngtghytler aahaasdvte
     1501 ascekaekea klatqrsgeq getmkpfdln yghaiiencg sspgeesevg slvgegfiev
     1561 ltkkqrrlle eerrkkeqav qvpvkgrsls sripprfakk qnnlcleqgd gpvpgsslgt
     1621 eiwesssqal plqastsdsw tkaataftst epgsaeqgfk ssqgdsgvdl saesressat
     1681 ssqrsspygt lkpeeasgpg lepkadghke qtqkqsepkd seqgsgqske hrpgpigner
     1741 slknrkgseg aerlqgavvp pvngveihvd svlpvppief gvnpkdsdfs lqpgsssgpv
     1801 gnpvvklqda lasnaglaps ipilrrdhhi qraiglshms fptadltlkm esarkawens
     1861 pnlpeqsspg gagsglqpps sggassgvsy ssfggvsmpp vpvasvapsa slpgshlppl
     1921 yldghvfasq prlvpqtipq qqsyqqvsf
//
LOCUS       XP_061010362            1481 aa            linear   MAM 02-DEC-2023
DEFINITION  protein PRRC2B isoform X15 [Dama dama].
ACCESSION   XP_061010362
VERSION     XP_061010362.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154379.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1481
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1481
                     /product="protein PRRC2B isoform X15"
                     /calculated_mol_wt=159512
     Region          2..189
                     /region_name="BAT2_N"
                     /note="BAT2 N-terminus; pfam07001"
                     /db_xref="CDD:462063"
     CDS             1..1481
                     /gene="PRRC2B"
                     /coded_by="XM_061154379.1:233..4678"
                     /db_xref="GeneID:133064370"
ORIGIN      
        1 msdrlgqitk gkdgkskyst lslfdkykgk svdsirssvi prhglqslgk vatarrmppp
       61 anlpslksen kgndpniviv pkdgtgwank qdqqdpksss vtasqppesl pqpglqksvs
      121 nlqkptqsis qentnsapgg pkswaqlngk paghegglra ssrllsfspe efptlkaagg
      181 qdkagkekgv ldlsygpgps lrpqnvtswr egggrniisa tslsasptel gsrnssagdg
      241 apssactsds kdpslrpaqp vrkgasqflg nvyhpptyhd mlpafmcspq ssenqgtver
      301 gsfplpqlrl eprvpfrqfq mndqdgkenr lgvsrpirpl rplvervprp tivnaenlkg
      361 lddldtdadd gwaglheevd yseklkfsdd eeeeevvkdg rpkwnswdpr rqrqlslssa
      421 dsadakrtqe egkdwsetgg vtrvvrkvpe pqppsrklhs wasgpdyqks smgtvfrqqs
      481 aedkedkppp rqkfvqsems eaverarkrr eeeerraree rlaacaaklk qldqkckqaq
      541 raneaqkqae keaprspgae kvapqengpa ihkgspefsa qetastfsee vptappavaq
      601 sggseegpre tgspaqefnk yqkslpprfq rqqqqqqqqq lykmqhwqpv ypppshpqrt
      661 fyphhpqmlg fdprwmmmps ymdprippar tpvdfypsal hpsglmkplm ppdslsgtgc
      721 rsedqscvpp lperkvtaid papvwspegy malqskgysl phpkssdsla mdmhvrspde
      781 alpgglgcgn gtghytlera ahaasdvtea scekaekeak latqrsgeqg etmkpfdlny
      841 ghaiiencgs spgeesevgs lvgegfievl tkkqrrllee errkkeqavq vpvkgrslss
      901 ripprfakkq nnlcleqgdg pvpgsslgte iwesssqalp lqastsdswt kaataftste
      961 pgsaeqgfks sqgdsgvdls aesressats sqrsspygtl kpeeasgpgl epkadghkeq
     1021 tqkqsepkds eqgsgqskeh rpgpigners lknrkgsega erlqgavvpp vngveihvds
     1081 vlpvppiefg vnpkdsdfsl qpgsssgpvg npvvklqdal asnaglapsi pilrrdhhiq
     1141 raiglshmsf ptadltlkme sarkawensp nlpeqsspgg agsglqppss ggassgvsys
     1201 sfggvsmppv pvasvapsas lpgshlpply ldghvfasqp rlvpqtipqq qsyqqaaaaq
     1261 qipislhtsl qaqaqlglrg glpvsqsqei fsslqpfrsq vymhpslspp stmilsggta
     1321 lkapysafpg mqplemvkpq sgspyqpmsg sqalvyegpl sqaaglgasq mldsqlpqlt
     1381 mplpgsqlpl prygsgqqpl llpqsiqlpq aqslsvgapr rilapgsqps vlntsressq
     1441 memkgfhfad skqnvpsggs vpspqtyrqs sewmkspawe p
//
LOCUS       XP_061010363             271 aa            linear   MAM 02-DEC-2023
DEFINITION  inactive phospholipid phosphatase 7 [Dama dama].
ACCESSION   XP_061010363
VERSION     XP_061010363.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154380.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..271
                     /product="inactive phospholipid phosphatase 7"
                     /calculated_mol_wt=29309
     Region          97..255
                     /region_name="PAP2_containing_2_like"
                     /note="PAP2, subfamily similar to human
                     phosphatidic_acid_phosphatase_type_2_domain_containing_2.
                     PAP2 is a super-family of phosphatases and
                     haloperoxidases. This subgroup, which is specific to
                     eukaryota, lacks functional characterization and may act
                     as a...; cd03391"
                     /db_xref="CDD:239485"
     Site            order(163,170,191..193,229,235,239)
                     /site_type="active"
                     /db_xref="CDD:239485"
     CDS             1..271
                     /gene="PLPP7"
                     /coded_by="XM_061154380.1:545..1360"
                     /db_xref="GeneID:133064371"
ORIGIN      
        1 mpasqsrara rdrsnvlnra eflslnqppk gapeprssgr kasgpspqpp apgdgarerr
       61 qsqqlpeedc mqlnpsfkgi afnsllaidi cmskrlgvca graaswasar smvkligitg
      121 hgvpwiggti lclvksstla gqevlmnlll allldimtva gvqklikrrg pfesspslld
      181 yltmdvyafp aghasraamv skfflshlvl avplrvllvl walcvglsrv migrhhitdv
      241 lsgfaigyfq frlvelvwms sntcqmlisa w
//
LOCUS       XP_061010364             283 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM78A isoform X1 [Dama dama].
ACCESSION   XP_061010364
VERSION     XP_061010364.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154381.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..283
                     /product="protein FAM78A isoform X1"
                     /calculated_mol_wt=31813
     CDS             1..283
                     /gene="FAM78A"
                     /coded_by="XM_061154381.1:605..1456"
                     /db_xref="GeneID:133064372"
ORIGIN      
        1 mpsfpwdcws sleiravlca mgciqsiggk arvfregitv idvkasidpi ptsidesssv
       61 vlryrtphfr asaqvvmppi pkketwivgw iqacshmefy nqygeqgmss welpdlqegk
      121 ieaisdsdgv nypwygntte tctivgptkr nskfiismnd nfypsvtwav pvsesnvakl
      181 tniyrdqsfi twlvatntst ndmiilqtlh wrmqlsievn psrplgqrar lrepiaqdqp
      241 kilsknepip psalvkpnan daqvlmwrpk fgqplvvipp khr
//
LOCUS       XP_061010365             126 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM78A isoform X2 [Dama dama].
ACCESSION   XP_061010365
VERSION     XP_061010365.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154382.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..126
                     /product="protein FAM78A isoform X2"
                     /calculated_mol_wt=14264
     CDS             1..126
                     /gene="FAM78A"
                     /coded_by="XM_061154382.1:428..808"
                     /db_xref="GeneID:133064372"
ORIGIN      
        1 mndnfypsvt wavpvsesnv akltniyrdq sfitwlvatn tstndmiilq tlhwrmqlsi
       61 evnpsrplgq rarlrepiaq dqpkilskne pippsalvkp nandaqvlmw rpkfgqplvv
      121 ippkhr
//
LOCUS       XP_061010366             126 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM78A isoform X2 [Dama dama].
ACCESSION   XP_061010366
VERSION     XP_061010366.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154383.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..126
                     /product="protein FAM78A isoform X2"
                     /calculated_mol_wt=14264
     CDS             1..126
                     /gene="FAM78A"
                     /coded_by="XM_061154383.1:246..626"
                     /db_xref="GeneID:133064372"
ORIGIN      
        1 mndnfypsvt wavpvsesnv akltniyrdq sfitwlvatn tstndmiilq tlhwrmqlsi
       61 evnpsrplgq rarlrepiaq dqpkilskne pippsalvkp nandaqvlmw rpkfgqplvv
      121 ippkhr
//
LOCUS       XP_061010367             126 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM78A isoform X2 [Dama dama].
ACCESSION   XP_061010367
VERSION     XP_061010367.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154384.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..126
                     /product="protein FAM78A isoform X2"
                     /calculated_mol_wt=14264
     CDS             1..126
                     /gene="FAM78A"
                     /coded_by="XM_061154384.1:382..762"
                     /db_xref="GeneID:133064372"
ORIGIN      
        1 mndnfypsvt wavpvsesnv akltniyrdq sfitwlvatn tstndmiilq tlhwrmqlsi
       61 evnpsrplgq rarlrepiaq dqpkilskne pippsalvkp nandaqvlmw rpkfgqplvv
      121 ippkhr
//
LOCUS       XP_061010368            2099 aa            linear   MAM 02-DEC-2023
DEFINITION  nuclear pore complex protein Nup214 isoform X1 [Dama dama].
ACCESSION   XP_061010368
VERSION     XP_061010368.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154385.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2099
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2099
                     /product="nuclear pore complex protein Nup214 isoform X1"
                     /calculated_mol_wt=214132
     Region          39..91
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          96..144
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <120..265
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          152..190
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          155..>216
                     /region_name="ANAPC4_WD40"
                     /note="Anaphase-promoting complex subunit 4 WD40 domain;
                     pfam12894"
                     /db_xref="CDD:403945"
     Region          196..230
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          243..291
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          304..350
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          362..401
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <408..701
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <688..886
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
     Region          <1292..1765
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1592..>2068
                     /region_name="COG4625"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal beta-barrel porin domain [Function unknown]"
                     /db_xref="CDD:443664"
     Region          1926..1986
                     /region_name="Nup214_FG"
                     /note="Nucleoporin Nup214 phenylalanine-glycine (FG)
                     domain; pfam18617"
                     /db_xref="CDD:408399"
     CDS             1..2099
                     /gene="NUP214"
                     /coded_by="XM_061154385.1:112..6411"
                     /db_xref="GeneID:133064374"
ORIGIN      
        1 mgdemdavip eremkdfqfr alkkvrifds peelpkerss llsvsnkygl vfaggasglh
       61 vfstknlliq nkpgddpnki vdkvqslmvp mkfpihhlal scdnltlsvc mmsseygsii
      121 affdvrtlsn eakqqkrpfa yhkllkdvgg lvidmkwnpt vssmvavcla dgsiavlqvt
      181 etvkvcatlp stvgvtsvcw spkgkqlavg kqngtvvqyl ptlqekkvip cppfyeadhp
      241 vrvldvlwig tyeftivyaa adgtletapd vvmallpkke ekhpevfvnf mepcygscte
      301 rqhhyylsyi eewdlvlaas aastevsila rqssqnswes wlledssrae lpvtdksdds
      361 lpmgvaidyt nqveitinee ktlppapvlm llstdgvlcp fyminqnpgv rsllrtperl
      421 slegerqpks sgsipttpts pqapqkldvp aaaapasvlp asqaaptstf slpsavfsfg
      481 ssslkssgsv pgeappsssg sdgakaalas gaspfsfapp sqaslaptpv aspmtpsaas
      541 fsfgssgfkp tlestpmpsv sapnvgmkat fppsapavkv nlsekftaaa tsapvhnsqs
      601 tpssmlpfss askpassgpl shpaplsass sslsskssvt psasgraaqg spspvpsmvq
      661 kspritppvt ksgspqpksl qppvtekqgh qwkesdpvma gigeeiahfq keleelkart
      721 skacfqvgts eemkmlrtes ddlhafllei ketteslhgd istlkitlle gfagveeare
      781 qnernrdsay lhllykrpld prseaqlqei rrlhqyvkfa vqdvndvldl ewdrhleqkk
      841 kqkrllvper etlfntlann reiinqqrkr lnhlvdslqq lrlynqtsqw slpldvpsqs
      901 athsfdsdle slrnallktt leshtkplpk vpaklspvkq aqlrnflakr ktppvrstap
      961 aslsrsafls qryyedldea sstssisqsl esedtrtsck dddavvqvpr hapvvrtpsi
     1021 qpsllpqatp fakshlihgs qgvmgtsmst paskiipqga dstmlatktv khgapgpshp
     1081 isapqaaaaa alrrqmasqa pavstltest lknvpqvvnv qelknnatap satvgssapy
     1141 saakaphpvl tpaaanqakq gslinalkps gpppassqls sgdkasgpva tkietavtst
     1201 pstvgqfskp fsfsssgtgf nfgivtptps snftatqgsa pptkessqld afsfggggkp
     1261 fyetvpeslp ssgtmtsast gaagaapges apsssrpaap sgislstpag kleappsklg
     1321 ellfpssltg etlgsfsglr vgqadestkp askapspgvt sagaqptktp aapsgfsfps
     1381 pavlgkpaep petssaatsa aaaptaaasp spspsssstg vfgnlpltsa gssglfsfgg
     1441 lffsssktsf sfggqstsst apssappsta tplptslpsl sfgsplsses aptlptssgk
     1501 sseaatssal pekpgsnets astasllgqq pptplpqapl qtpdpgkkep alaqpavssp
     1561 gteaastsvl apaaeaapta pgvpdvktep pspgptvsvp gpatitapga sstipvapet
     1621 srppttssav ssaapgpate tpvfgivtsd ssvftqppaa ssssafsqlt shtatapsat
     1681 pmfgqvatst apslfgqqtg snvstaaaap qvsssgfgsp afgastpgvf gqpgfgqapa
     1741 fgqstsspas sfsfsqpgfs svpafgqsvs stptstsgnv fgassstsss ssfsfgqsst
     1801 nnggglfgqn nppafgqspg fgqggsvfgg tsaatttass sgfsfcqasg fgssntgslf
     1861 gqaastsgtv fgqqsssssg svfgsgnagr gggffsglgg kpsqdaankn pfssasggfg
     1921 statpntsnl fgnsgaktfg gfasssfgdq kpagtfssgg gsvasqgfgf stpnktggfg
     1981 aapvfgsppt fggspgfggv pafgsapaft splgstggkv fgegtaaasa ggfgfgsssn
     2041 ttsfgtlasq naptfgslsq qsagfgsqsg gfsgfgsggg aftfgssnss vqgfggwrs
//
LOCUS       XP_061010369            2098 aa            linear   MAM 02-DEC-2023
DEFINITION  nuclear pore complex protein Nup214 isoform X2 [Dama dama].
ACCESSION   XP_061010369
VERSION     XP_061010369.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154386.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2098
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2098
                     /product="nuclear pore complex protein Nup214 isoform X2"
                     /calculated_mol_wt=214004
     Region          39..91
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          96..144
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <120..265
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          152..190
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          155..>216
                     /region_name="ANAPC4_WD40"
                     /note="Anaphase-promoting complex subunit 4 WD40 domain;
                     pfam12894"
                     /db_xref="CDD:403945"
     Region          196..230
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          243..291
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          304..350
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          362..401
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <408..701
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <688..886
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
     Region          <1292..1765
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1592..>2073
                     /region_name="COG4625"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal beta-barrel porin domain [Function unknown]"
                     /db_xref="CDD:443664"
     Region          1925..1985
                     /region_name="Nup214_FG"
                     /note="Nucleoporin Nup214 phenylalanine-glycine (FG)
                     domain; pfam18617"
                     /db_xref="CDD:408399"
     CDS             1..2098
                     /gene="NUP214"
                     /coded_by="XM_061154386.1:112..6408"
                     /db_xref="GeneID:133064374"
ORIGIN      
        1 mgdemdavip eremkdfqfr alkkvrifds peelpkerss llsvsnkygl vfaggasglh
       61 vfstknlliq nkpgddpnki vdkvqslmvp mkfpihhlal scdnltlsvc mmsseygsii
      121 affdvrtlsn eakqqkrpfa yhkllkdvgg lvidmkwnpt vssmvavcla dgsiavlqvt
      181 etvkvcatlp stvgvtsvcw spkgkqlavg kqngtvvqyl ptlqekkvip cppfyeadhp
      241 vrvldvlwig tyeftivyaa adgtletapd vvmallpkke ekhpevfvnf mepcygscte
      301 rqhhyylsyi eewdlvlaas aastevsila rqssqnswes wlledssrae lpvtdksdds
      361 lpmgvaidyt nqveitinee ktlppapvlm llstdgvlcp fyminqnpgv rsllrtperl
      421 slegerqpks sgsipttpts pqapqkldvp aaaapasvlp asqaaptstf slpsavfsfg
      481 ssslkssgsv pgeappsssg sdgakaalas gaspfsfapp sqaslaptpv aspmtpsaas
      541 fsfgssgfkp tlestpmpsv sapnvgmkat fppsapavkv nlsekftaaa tsapvhnsqs
      601 tpssmlpfss askpassgpl shpaplsass sslsskssvt psasgraaqg spspvpsmvq
      661 kspritppvt ksgspqpksl qppvtekqgh qwkesdpvma gigeeiahfq keleelkart
      721 skacfqvgts eemkmlrtes ddlhafllei ketteslhgd istlkitlle gfagveeare
      781 qnernrdsay lhllykrpld prseaqlqei rrlhqyvkfa vqdvndvldl ewdrhleqkk
      841 kqkrllvper etlfntlann reiinqqrkr lnhlvdslqq lrlynqtsqw slpldvpsqs
      901 athsfdsdle slrnallktt leshtkplpk vpaklspvkq aqlrnflakr ktppvrstap
      961 aslsrsafls qryyedldea sstssisqsl esedtrtsck dddavvqvpr hapvvrtpsi
     1021 qpsllpqatp fakshlihgs qgvmgtsmst paskiipqga dstmlatktv khgapgpshp
     1081 isapqaaaaa alrrqmasqa pavstltest lknvpqvvnv qelknnatap satvgssapy
     1141 saakaphpvl tpaaanqakq gslinalkps gpppassqls sgdkasgpva tkietavtst
     1201 pstvgqfskp fsfsssgtgf nfgivtptps snftatqgsa pptkessqld afsfggggkp
     1261 fyetvpeslp ssgtmtsast gaagaapges apsssrpaap sgislstpag kleappsklg
     1321 ellfpssltg etlgsfsglr vgqadestkp askapspgvt sagaqptktp aapsgfsfps
     1381 pavlgkpaep petssaatsa aaaptaaasp spspsssstg vfgnlpltsa gssglfsfgg
     1441 lffsssktsf sfggqstsst apssappsta tplptslpsl sfgsplsses aptlptssgk
     1501 sseaatssal pekpgsnets astasllgqq pptplpqapl qtpdpgkkep alaqpavssp
     1561 gteaastsvl apaaeaapta pgvpdvktep pspgptvsvp gpatitapga sstipvapet
     1621 srppttssav ssaapgpate tpvfgivtsd ssvftqppaa ssssafsqlt shtatapsat
     1681 pmfgqvatst apslfgqqtg snvstaaaap qvsssgfgsp afgastpgvf gqpgfgqapa
     1741 fgqstsspas sfsfsqpgfs svpafgqsvs stptstsgnv fgassstsss ssfsfgqsst
     1801 nnggglfgqn nppafgqspg fgqggsvfgg tsaatttass sgfsfcqasg fgssntgslf
     1861 gqaastsgtv fgqsssssgs vfgsgnagrg ggffsglggk psqdaanknp fssasggfgs
     1921 tatpntsnlf gnsgaktfgg fasssfgdqk pagtfssggg svasqgfgfs tpnktggfga
     1981 apvfgspptf ggspgfggvp afgsapafts plgstggkvf gegtaaasag gfgfgsssnt
     2041 tsfgtlasqn aptfgslsqq sagfgsqsgg fsgfgsggga ftfgssnssv qgfggwrs
//
LOCUS       XP_061010370            2064 aa            linear   MAM 02-DEC-2023
DEFINITION  nuclear pore complex protein Nup214 isoform X3 [Dama dama].
ACCESSION   XP_061010370
VERSION     XP_061010370.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154387.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2064
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2064
                     /product="nuclear pore complex protein Nup214 isoform X3"
                     /calculated_mol_wt=210590
     Region          39..91
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          96..144
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <120..265
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          152..190
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          155..>216
                     /region_name="ANAPC4_WD40"
                     /note="Anaphase-promoting complex subunit 4 WD40 domain;
                     pfam12894"
                     /db_xref="CDD:403945"
     Region          196..230
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          243..291
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          304..350
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          362..401
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <408..701
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <688..886
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
     Region          <1127..1356
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          <1257..1730
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1557..>2033
                     /region_name="COG4625"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal beta-barrel porin domain [Function unknown]"
                     /db_xref="CDD:443664"
     Region          1891..1951
                     /region_name="Nup214_FG"
                     /note="Nucleoporin Nup214 phenylalanine-glycine (FG)
                     domain; pfam18617"
                     /db_xref="CDD:408399"
     CDS             1..2064
                     /gene="NUP214"
                     /coded_by="XM_061154387.1:112..6306"
                     /db_xref="GeneID:133064374"
ORIGIN      
        1 mgdemdavip eremkdfqfr alkkvrifds peelpkerss llsvsnkygl vfaggasglh
       61 vfstknlliq nkpgddpnki vdkvqslmvp mkfpihhlal scdnltlsvc mmsseygsii
      121 affdvrtlsn eakqqkrpfa yhkllkdvgg lvidmkwnpt vssmvavcla dgsiavlqvt
      181 etvkvcatlp stvgvtsvcw spkgkqlavg kqngtvvqyl ptlqekkvip cppfyeadhp
      241 vrvldvlwig tyeftivyaa adgtletapd vvmallpkke ekhpevfvnf mepcygscte
      301 rqhhyylsyi eewdlvlaas aastevsila rqssqnswes wlledssrae lpvtdksdds
      361 lpmgvaidyt nqveitinee ktlppapvlm llstdgvlcp fyminqnpgv rsllrtperl
      421 slegerqpks sgsipttpts pqapqkldvp aaaapasvlp asqaaptstf slpsavfsfg
      481 ssslkssgsv pgeappsssg sdgakaalas gaspfsfapp sqaslaptpv aspmtpsaas
      541 fsfgssgfkp tlestpmpsv sapnvgmkat fppsapavkv nlsekftaaa tsapvhnsqs
      601 tpssmlpfss askpassgpl shpaplsass sslsskssvt psasgraaqg spspvpsmvq
      661 kspritppvt ksgspqpksl qppvtekqgh qwkesdpvma gigeeiahfq keleelkart
      721 skacfqvgts eemkmlrtes ddlhafllei ketteslhgd istlkitlle gfagveeare
      781 qnernrdsay lhllykrpld prseaqlqei rrlhqyvkfa vqdvndvldl ewdrhleqkk
      841 kqkrllvper etlfntlann reiinqqrkr lnhlvdslqq lrlynqtsqw slpldvpsqs
      901 athsfdsdle slrnallktt leshtkplpk vpaklspvkq aqlrnflakr ktppvrstap
      961 aslsrsafls qryyedldea sstssisqsl esedtrtsck dddavvqvpr hapvvrtpsi
     1021 qpsllpqatp fakshlihgs qgvmgtsmst paskiipqga dstmlatktv khgapgpshp
     1081 isapqaaaaa alrrqmasqa pavstltest lknvpqvvnv qelknnatap satvgssapy
     1141 saakaphpvl tpaaanqakq gslinalkps gpppassqls sgdkasgpva tkietavtst
     1201 pstvgqfskp fsfsssgtgf nfgivtptps snftatqgtm tsastgaaga apgesapsss
     1261 rpaapsgisl stpagkleap psklgellfp ssltgetlgs fsglrvgqad estkpaskap
     1321 spgvtsagaq ptktpaapsg fsfpspavlg kpaeppetss aatsaaaapt aaaspspsps
     1381 ssstgvfgnl pltsagssgl fsfgglffss sktsfsfggq stsstapssa ppstatplpt
     1441 slpslsfgsp lssesaptlp tssgksseaa tssalpekpg snetsastas llgqqpptpl
     1501 pqaplqtpdp gkkepalaqp avsspgteaa stsvlapaae aaptapgvpd vkteppspgp
     1561 tvsvpgpati tapgasstip vapetsrppt tssavssaap gpatetpvfg ivtsdssvft
     1621 qppaassssa fsqltshtat apsatpmfgq vatstapslf gqqtgsnvst aaaapqvsss
     1681 gfgspafgas tpgvfgqpgf gqapafgqst sspassfsfs qpgfssvpaf gqsvsstpts
     1741 tsgnvfgass stsssssfsf gqsstnnggg lfgqnnppaf gqspgfgqgg svfggtsaat
     1801 ttasssgfsf cqasgfgssn tgslfgqaas tsgtvfgqqs ssssgsvfgs gnagrgggff
     1861 sglggkpsqd aanknpfssa sggfgstatp ntsnlfgnsg aktfggfass sfgdqkpagt
     1921 fssgggsvas qgfgfstpnk tggfgaapvf gspptfggsp gfggvpafgs apaftsplgs
     1981 tggkvfgegt aaasaggfgf gsssnttsfg tlasqnaptf gslsqqsagf gsqsggfsgf
     2041 gsgggaftfg ssnssvqgfg gwrs
//
LOCUS       XP_061010372            2008 aa            linear   MAM 02-DEC-2023
DEFINITION  nuclear pore complex protein Nup214 isoform X4 [Dama dama].
ACCESSION   XP_061010372
VERSION     XP_061010372.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154389.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2008
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2008
                     /product="nuclear pore complex protein Nup214 isoform X4"
                     /calculated_mol_wt=205579
     Region          39..91
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          96..144
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <120..265
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          152..190
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          155..>216
                     /region_name="ANAPC4_WD40"
                     /note="Anaphase-promoting complex subunit 4 WD40 domain;
                     pfam12894"
                     /db_xref="CDD:403945"
     Region          196..230
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          243..291
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          304..350
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          362..401
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <415..597
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <597..795
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
     Region          <1201..1674
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1501..>1977
                     /region_name="COG4625"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal beta-barrel porin domain [Function unknown]"
                     /db_xref="CDD:443664"
     Region          1835..1895
                     /region_name="Nup214_FG"
                     /note="Nucleoporin Nup214 phenylalanine-glycine (FG)
                     domain; pfam18617"
                     /db_xref="CDD:408399"
     CDS             1..2008
                     /gene="NUP214"
                     /coded_by="XM_061154389.1:112..6138"
                     /db_xref="GeneID:133064374"
ORIGIN      
        1 mgdemdavip eremkdfqfr alkkvrifds peelpkerss llsvsnkygl vfaggasglh
       61 vfstknlliq nkpgddpnki vdkvqslmvp mkfpihhlal scdnltlsvc mmsseygsii
      121 affdvrtlsn eakqqkrpfa yhkllkdvgg lvidmkwnpt vssmvavcla dgsiavlqvt
      181 etvkvcatlp stvgvtsvcw spkgkqlavg kqngtvvqyl ptlqekkvip cppfyeadhp
      241 vrvldvlwig tyeftivyaa adgtletapd vvmallpkke ekhpevfvnf mepcygscte
      301 rqhhyylsyi eewdlvlaas aastevsila rqssqnswes wlledssrae lpvtdksdds
      361 lpmgvaidyt nqveitinee ktlppapvlm llstdgvlcp fyminqnpgv rsllrtperl
      421 slegerqpks saslaptpva spmtpsaasf sfgssgfkpt lestpmpsvs apnvgmkatf
      481 ppsapavkvn lsekftaaat sapvhnsqst pssmlpfssa skpassgpls hpaplsasss
      541 slsskssvtp sasgraaqgs pspvpsmvqk spritppvtk sgspqpkslq ppvtekqghq
      601 wkesdpvmag igeeiahfqk eleelkarts kacfqvgtse emkmlrtesd dlhaflleik
      661 etteslhgdi stlkitlleg fagveeareq nernrdsayl hllykrpldp rseaqlqeir
      721 rlhqyvkfav qdvndvldle wdrhleqkkk qkrllvpere tlfntlannr eiinqqrkrl
      781 nhlvdslqql rlynqtsqws lpldvpsqsa thsfdsdles lrnallkttl eshtkplpkv
      841 paklspvkqa qlrnflakrk tppvrstapa slsrsaflsq ryyedldeas stssisqsle
      901 sedtrtsckd ddavvqvprh apvvrtpsiq psllpqatpf akshlihgsq gvmgtsmstp
      961 askiipqgad stmlatktvk hgapgpshpi sapqaaaaaa lrrqmasqap avstltestl
     1021 knvpqvvnvq elknnataps atvgssapys aakaphpvlt paaanqakqg slinalkpsg
     1081 pppassqlss gdkasgpvat kietavtstp stvgqfskpf sfsssgtgfn fgivtptpss
     1141 nftatqgsap ptkessqlda fsfggggkpf yetvpeslps sgtmtsastg aagaapgesa
     1201 psssrpaaps gislstpagk leappsklge llfpssltge tlgsfsglrv gqadestkpa
     1261 skapspgvts agaqptktpa apsgfsfpsp avlgkpaepp etssaatsaa aaptaaasps
     1321 pspsssstgv fgnlpltsag ssglfsfggl ffsssktsfs fggqstssta pssappstat
     1381 plptslpsls fgsplssesa ptlptssgks seaatssalp ekpgsnetsa stasllgqqp
     1441 ptplpqaplq tpdpgkkepa laqpavsspg teaastsvla paaeaaptap gvpdvktepp
     1501 spgptvsvpg patitapgas stipvapets rppttssavs saapgpatet pvfgivtsds
     1561 svftqppaas sssafsqlts htatapsatp mfgqvatsta pslfgqqtgs nvstaaaapq
     1621 vsssgfgspa fgastpgvfg qpgfgqapaf gqstsspass fsfsqpgfss vpafgqsvss
     1681 tptstsgnvf gassstssss sfsfgqsstn nggglfgqnn ppafgqspgf gqggsvfggt
     1741 saatttasss gfsfcqasgf gssntgslfg qaastsgtvf gqqsssssgs vfgsgnagrg
     1801 ggffsglggk psqdaanknp fssasggfgs tatpntsnlf gnsgaktfgg fasssfgdqk
     1861 pagtfssggg svasqgfgfs tpnktggfga apvfgspptf ggspgfggvp afgsapafts
     1921 plgstggkvf gegtaaasag gfgfgsssnt tsfgtlasqn aptfgslsqq sagfgsqsgg
     1981 fsgfgsggga ftfgssnssv qgfggwrs
//
LOCUS       XP_061010373             150 aa            linear   MAM 02-DEC-2023
DEFINITION  allograft inflammatory factor 1-like [Dama dama].
ACCESSION   XP_061010373
VERSION     XP_061010373.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154390.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..150
                     /product="allograft inflammatory factor 1-like"
                     /calculated_mol_wt=16774
     Region          47..>115
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..150
                     /gene="AIF1L"
                     /coded_by="XM_061154390.1:96..548"
                     /db_xref="GeneID:133064375"
ORIGIN      
        1 msvalsnrfq ggkafgllka rqerrlaein reflcdqkyg deeslpekla afkekymefd
       61 lnnegeidlm slkrmmeklg vpkthlemkk misevtggvs dtisyrdfvn mmlgkrsavl
      121 klvmmfegka neggpkpvgp pperdiaslp
//
LOCUS       XP_061010374             249 aa            linear   MAM 02-DEC-2023
DEFINITION  small ribosomal subunit protein eS6-like [Dama dama].
ACCESSION   XP_061010374
VERSION     XP_061010374.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154391.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..249
                     /product="small ribosomal subunit protein eS6-like"
                     /calculated_mol_wt=28566
     Region          1..215
                     /region_name="Ribosomal_S6e"
                     /note="Ribosomal protein S6e; cl00931"
                     /db_xref="CDD:469996"
     CDS             1..249
                     /gene="LOC133064376"
                     /coded_by="XM_061154391.1:12..761"
                     /db_xref="GeneID:133064376"
ORIGIN      
        1 mklnisfpat gcqklievdd erklrtfyek rmatevaada lgeewkgyvv risggndkqg
       61 fpmkqgvlth grvrlllskg hscyrprrtg erkrksvrgc ivdanlsvln lvivkkgekd
      121 ipgltdttvl rrlgpkrasr irklfnlske ddvrqyvvrk plnkegkkpr tkapkiqrlv
      181 tprvlqhkrr rialkkqrtk knkeeaaeya kllakrmkea kekrqeqiak rrrlsslras
      241 tsksessqk
//
LOCUS       XP_061010375            1147 aa            linear   MAM 02-DEC-2023
DEFINITION  tyrosine-protein kinase ABL1 isoform X1 [Dama dama].
ACCESSION   XP_061010375
VERSION     XP_061010375.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154392.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1147
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1147
                     /product="tyrosine-protein kinase ABL1 isoform X1"
                     /calculated_mol_wt=124083
     Region          84..137
                     /region_name="SH3_Abl"
                     /note="Src homology 3 domain of the Protein Tyrosine
                     Kinase, Abelson kinase; cd11850"
                     /db_xref="CDD:212784"
     Site            order(89,91,94..96,98,113,117..118,129,131,133..134)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212784"
     Site            order(93..96,115,117)
                     /site_type="other"
                     /note="PTKc domain interface [polypeptide binding]"
                     /db_xref="CDD:212784"
     Region          142..235
                     /region_name="SH2_ABL"
                     /note="Src homology 2 (SH2) domain found in Abelson murine
                     lymphosarcoma virus (ABL) proteins; cd09935"
                     /db_xref="CDD:198189"
     Site            order(153,181,194)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198189"
     Region          254..516
                     /region_name="PTKc_Abl"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     Abelson kinase; cd05052"
                     /db_xref="CDD:270645"
     Site            order(267,269..271,288,290,335,337,341,389,400,418..420,
                     422,430,464,468)
                     /site_type="active"
                     /db_xref="CDD:270645"
     Site            order(267,269,272,288,290,305,309,318,334..335,337,341,
                     389,399..400)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270645"
     Site            order(282..283,313..315,319,361,393..394,512..513)
                     /site_type="other"
                     /note="SH3/SH2 domain interface [polypeptide binding]"
                     /db_xref="CDD:270645"
     Site            order(359..360,363,448,451..452,481..482)
                     /site_type="other"
                     /note="myristoyl binding site [chemical binding]"
                     /db_xref="CDD:270645"
     Site            399..423
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270645"
     Site            order(418..420,422,430,464,468)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270645"
     Region          1023..1147
                     /region_name="FABD"
                     /note="F-actin binding domain (FABD); smart00808"
                     /db_xref="CDD:197885"
     CDS             1..1147
                     /gene="ABL1"
                     /coded_by="XM_061154392.1:603..4046"
                     /db_xref="GeneID:133064377"
ORIGIN      
        1 mgqqpgkvlg dqrrpslpal hfikgagkke ssrhggphcn vfvehealqr pvasdfepqg
       61 lseaarwnsk enllagpsen dpnlfvalyd fvasgdntls itkgeklrvl gynhngewce
      121 aqtkngqgwv psnyitpvns lekhswyhgp vsrnaaeyll ssgingsflv resesspgqr
      181 sislryegrv yhyrintasd gklyvssesr fntlaelvhh hstvadglit tlhypapkrn
      241 kptvygvspn ydkwemertd itmkhklggg qygevyegvw kkysltvavk tlkedtmeve
      301 eflkeaavmk eikhpnlvql lgvctreppf yiitefmtyg nlldylrdcn rqevnavvll
      361 ymatqissam eylekknfih rdlaarnclv genhlvkvad fglsrlmtgd tytahagakf
      421 pikwtapesl aynkfsiksd iwafgvllwe iatygmspyp gidlsqvyel lekdyrmerp
      481 egcpekvyel mracwqwnps drpsfaeihq afetmfqess isdevekelg kkgmrgvagt
      541 llqapelptk trtsrraaep kdtpdmpetp hskgpgetdp ldhepavspl lprkergppd
      601 gglnederll pkdkktnlfs alikkkkkta ptppkrsssf remdgpperk aaseeegrei
      661 sngalapapp daaelakspk psggsgvpng afresggagf rsphlwkkss tltssrlaag
      721 eeeggggask rflrscsasc vphgakdtew rsvtlprdlq stgrqfdsst fgghksekpa
      781 lprkrasenr sdqvtrgtvt ppprlvkkte eaadevfkdv aeaspgsspp sltpkplrrq
      841 gaaappsspp hkeeagrpsa tgvptelaps tsragpgasg gpnkaattee prgrrhkpts
      901 espgrdkgkl aklkpapppp pptsagkagk ssqspsqeaa geagtggkgk paalaadtvn
      961 sdttkpgqlg egakkptlps mpkppastkp agtptspapa plpsapsala gdppsstafi
     1021 plistrvslr ktrqpperla sgaitkgmvl dgtealclai sknseqmash savleagknl
     1081 ytfcvsyvds iqqmrnkfaf reainklenn lrelqicpat agggpaatqd fskllssvke
     1141 isdivqr
//
LOCUS       XP_061010376            1128 aa            linear   MAM 02-DEC-2023
DEFINITION  tyrosine-protein kinase ABL1 isoform X2 [Dama dama].
ACCESSION   XP_061010376
VERSION     XP_061010376.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154393.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1128
                     /product="tyrosine-protein kinase ABL1 isoform X2"
                     /calculated_mol_wt=122001
     Region          65..118
                     /region_name="SH3_Abl"
                     /note="Src homology 3 domain of the Protein Tyrosine
                     Kinase, Abelson kinase; cd11850"
                     /db_xref="CDD:212784"
     Site            order(70,72,75..77,79,94,98..99,110,112,114..115)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212784"
     Site            order(74..77,96,98)
                     /site_type="other"
                     /note="PTKc domain interface [polypeptide binding]"
                     /db_xref="CDD:212784"
     Region          123..216
                     /region_name="SH2_ABL"
                     /note="Src homology 2 (SH2) domain found in Abelson murine
                     lymphosarcoma virus (ABL) proteins; cd09935"
                     /db_xref="CDD:198189"
     Site            order(134,162,175)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198189"
     Region          235..497
                     /region_name="PTKc_Abl"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     Abelson kinase; cd05052"
                     /db_xref="CDD:270645"
     Site            order(248,250..252,269,271,316,318,322,370,381,399..401,
                     403,411,445,449)
                     /site_type="active"
                     /db_xref="CDD:270645"
     Site            order(248,250,253,269,271,286,290,299,315..316,318,322,
                     370,380..381)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270645"
     Site            order(263..264,294..296,300,342,374..375,493..494)
                     /site_type="other"
                     /note="SH3/SH2 domain interface [polypeptide binding]"
                     /db_xref="CDD:270645"
     Site            order(340..341,344,429,432..433,462..463)
                     /site_type="other"
                     /note="myristoyl binding site [chemical binding]"
                     /db_xref="CDD:270645"
     Site            380..404
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270645"
     Site            order(399..401,403,411,445,449)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270645"
     Region          1004..1128
                     /region_name="FABD"
                     /note="F-actin binding domain (FABD); smart00808"
                     /db_xref="CDD:197885"
     CDS             1..1128
                     /gene="ABL1"
                     /coded_by="XM_061154393.1:51..3437"
                     /db_xref="GeneID:133064377"
ORIGIN      
        1 mleiclklvg ckskkglsss sscyleealq rpvasdfepq glseaarwns kenllagpse
       61 ndpnlfvaly dfvasgdntl sitkgeklrv lgynhngewc eaqtkngqgw vpsnyitpvn
      121 slekhswyhg pvsrnaaeyl lssgingsfl vresesspgq rsislryegr vyhyrintas
      181 dgklyvsses rfntlaelvh hhstvadgli ttlhypapkr nkptvygvsp nydkwemert
      241 ditmkhklgg gqygevyegv wkkysltvav ktlkedtmev eeflkeaavm keikhpnlvq
      301 llgvctrepp fyiitefmty gnlldylrdc nrqevnavvl lymatqissa meylekknfi
      361 hrdlaarncl vgenhlvkva dfglsrlmtg dtytahagak fpikwtapes laynkfsiks
      421 diwafgvllw eiatygmspy pgidlsqvye llekdyrmer pegcpekvye lmracwqwnp
      481 sdrpsfaeih qafetmfqes sisdevekel gkkgmrgvag tllqapelpt ktrtsrraae
      541 pkdtpdmpet phskgpgetd pldhepavsp llprkergpp dgglnederl lpkdkktnlf
      601 salikkkkkt aptppkrsss fremdgpper kaaseeegre isngalapap pdaaelaksp
      661 kpsggsgvpn gafresggag frsphlwkks stltssrlaa geeeggggas krflrscsas
      721 cvphgakdte wrsvtlprdl qstgrqfdss tfgghksekp alprkrasen rsdqvtrgtv
      781 tppprlvkkt eeaadevfkd vaeaspgssp psltpkplrr qgaaappssp phkeeagrps
      841 atgvptelap stsragpgas ggpnkaatte eprgrrhkpt sespgrdkgk laklkpappp
      901 ppptsagkag kssqspsqea ageagtggkg kpaalaadtv nsdttkpgql gegakkptlp
      961 smpkppastk pagtptspap aplpsapsal agdppsstaf iplistrvsl rktrqpperl
     1021 asgaitkgmv ldgtealcla isknseqmas hsavleagkn lytfcvsyvd siqqmrnkfa
     1081 freainklen nlrelqicpa tagggpaatq dfskllssvk eisdivqr
//
LOCUS       XP_061010377             951 aa            linear   MAM 02-DEC-2023
DEFINITION  tyrosine-protein kinase ABL1 isoform X3 [Dama dama].
ACCESSION   XP_061010377
VERSION     XP_061010377.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154394.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..951
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..951
                     /product="tyrosine-protein kinase ABL1 isoform X3"
                     /calculated_mol_wt=102632
     Region          <7..39
                     /region_name="SH2"
                     /note="Src homology 2 (SH2) domain; cl15255"
                     /db_xref="CDD:472789"
     Region          58..320
                     /region_name="PTKc_Abl"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     Abelson kinase; cd05052"
                     /db_xref="CDD:270645"
     Site            order(71,73..75,92,94,139,141,145,193,204,222..224,226,
                     234,268,272)
                     /site_type="active"
                     /db_xref="CDD:270645"
     Site            order(71,73,76,92,94,109,113,122,138..139,141,145,193,
                     203..204)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270645"
     Site            order(86..87,117..119,123,165,197..198,316..317)
                     /site_type="other"
                     /note="SH3/SH2 domain interface [polypeptide binding]"
                     /db_xref="CDD:270645"
     Site            order(163..164,167,252,255..256,285..286)
                     /site_type="other"
                     /note="myristoyl binding site [chemical binding]"
                     /db_xref="CDD:270645"
     Site            203..227
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270645"
     Site            order(222..224,226,234,268,272)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270645"
     Region          626..>841
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          827..951
                     /region_name="FABD"
                     /note="F-actin binding domain (FABD); smart00808"
                     /db_xref="CDD:197885"
     CDS             1..951
                     /gene="ABL1"
                     /coded_by="XM_061154394.1:136..2991"
                     /db_xref="GeneID:133064377"
ORIGIN      
        1 mflwnmlyvs sesrfntlae lvhhhstvad glittlhypa pkrnkptvyg vspnydkwem
       61 ertditmkhk lgggqygevy egvwkkyslt vavktlkedt meveeflkea avmkeikhpn
      121 lvqllgvctr eppfyiitef mtygnlldyl rdcnrqevna vvllymatqi ssameylekk
      181 nfihrdlaar nclvgenhlv kvadfglsrl mtgdtytaha gakfpikwta peslaynkfs
      241 iksdiwafgv llweiatygm spypgidlsq vyellekdyr merpegcpek vyelmracwq
      301 wnpsdrpsfa eihqafetmf qessisdeve kelgkkgmrg vagtllqape lptktrtsrr
      361 aaepkdtpdm petphskgpg etdpldhepa vspllprker gppdgglned erllpkdkkt
      421 nlfsalikkk kktaptppkr sssfremdgp perkaaseee greisngala pappdaaela
      481 kspkpsggsg vpngafresg gagfrsphlw kksstltssr laageeeggg gaskrflrsc
      541 sascvphgak dtewrsvtlp rdlqstgrqf dsstfgghks ekpalprkra senrsdqvtr
      601 gtvtppprlv kkteeaadev fkdvaeaspg ssppsltpkp lrrqgaaapp sspphkeeag
      661 rpsatgvpte lapstsragp gasggpnkaa tteeprgrrh kptsespgrd kgklaklkpa
      721 pppppptsag kagkssqsps qeaageagtg gkgkpaalaa dtvnsdttkp gqlgegakkp
      781 tlpsmpkppa stkpagtpts papaplpsap salagdppss tafiplistr vslrktrqpp
      841 erlasgaitk gmvldgteal claisknseq mashsavlea gknlytfcvs yvdsiqqmrn
      901 kfafreaink lennlrelqi cpatagggpa atqdfsklls svkeisdivq r
//
LOCUS       XP_061010378             293 aa            linear   MAM 02-DEC-2023
DEFINITION  exosome complex component RRP4 [Dama dama].
ACCESSION   XP_061010378
VERSION     XP_061010378.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154395.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..293
                     /product="exosome complex component RRP4"
                     /calculated_mol_wt=32488
     Region          26..63
                     /region_name="ECR1_N"
                     /note="Exosome complex exonuclease RRP4 N-terminal region;
                     pfam14382"
                     /db_xref="CDD:464162"
     Region          75..166
                     /region_name="S1_Rrp4"
                     /note="Rrp4 S1-like RNA-binding domain. S1-like
                     RNA-binding domains are found in a wide variety of
                     RNA-associated proteins. Rrp4 protein is a subunit of the
                     exosome complex. The exosome plays a central role in 3' to
                     5' RNA processing and degradation in...; cd05789"
                     /db_xref="CDD:240215"
     Site            order(75,87,89,103)
                     /site_type="other"
                     /note="subunit interface [polypeptide binding]"
                     /db_xref="CDD:240215"
     Site            order(89,97,107,109)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:240215"
     Region          169..285
                     /region_name="KH-I_Rrp4_eukar"
                     /note="type I K homology (KH) RNA-binding domain found in
                     exosome complex component Rrp4 from eukaryote; cd22525"
                     /db_xref="CDD:411953"
     Site            order(169,178,181,183..184,186,204,228,231,234..235,
                     238..239,247..248,268..269,285)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:411953"
     CDS             1..293
                     /gene="EXOSC2"
                     /coded_by="XM_061154395.1:13..894"
                     /db_xref="GeneID:133064378"
ORIGIN      
        1 malemrlpva rkplseslgr eskkhlvvpg dtittdtgfm rghgtymgee kliasvagsv
       61 ervnklicvk alktryngev gdivvgrite vqqkrwkvet nsrldsvlll ssmnlpggel
      121 rrrsaedela mrgflqegdl isaevqavfs dgavslhtrs lkygklgqgv lvqvspslvk
      181 rqkthfhdlp cgasvilgnn gfiwvyptpe hkeddaggfi anlepvslad revisrlrnc
      241 ivslatqrmm lydtsilycy easlphqikd ilkpeimeei vmetrqrlle qeg
//
LOCUS       XP_061010379              32 aa            linear   MAM 02-DEC-2023
DEFINITION  umcharacterized LOC128092248 homolog [Dama dama].
ACCESSION   XP_061010379
VERSION     XP_061010379.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154396.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..32
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..32
                     /product="umcharacterized LOC128092248 homolog"
                     /calculated_mol_wt=3600
     CDS             1..32
                     /gene="LOC133064379"
                     /coded_by="XM_061154396.1:1..99"
                     /db_xref="GeneID:133064379"
ORIGIN      
        1 msptapsasa qpetlmqrks ldwfhrpfkk rt
//
LOCUS       XP_061010380             599 aa            linear   MAM 02-DEC-2023
DEFINITION  far upstream element-binding protein 3 isoform X1 [Dama dama].
ACCESSION   XP_061010380
VERSION     XP_061010380.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154397.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..599
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..599
                     /product="far upstream element-binding protein 3 isoform
                     X1"
                     /calculated_mol_wt=64241
     Region          105..175
                     /region_name="KH-I_FUBP3_rpt1"
                     /note="first type I K homology (KH) RNA-binding domain
                     found in far upstream element-binding protein 3 (FUBP3)
                     and similar proteins; cd22480"
                     /db_xref="CDD:411908"
     Site            order(114,116..118,120..124,127..128,131..132,137..140)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:411908"
     Region          186..268
                     /region_name="KH-I_FUBP3_rpt2"
                     /note="second type I K homology (KH) RNA-binding domain
                     found in far upstream element-binding protein 3 (FUBP3)
                     and similar proteins; cd22483"
                     /db_xref="CDD:411911"
     Site            order(199,201..203,205..209,212..213,216..217,222..225)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:411911"
     Region          279..348
                     /region_name="KH-I_FUBP3_rpt3"
                     /note="third type I K homology (KH) RNA-binding domain
                     found in far upstream element-binding protein 3 (FUBP3)
                     and similar proteins; cd22486"
                     /db_xref="CDD:411914"
     Site            order(289..294,296..300,303..304,313,315..316,326)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:411914"
     Region          383..451
                     /region_name="KH-I_FUBP3_rpt4"
                     /note="fourth type I K homology (KH) RNA-binding domain
                     found in far upstream element-binding protein 3 (FUBP3)
                     and similar proteins; cd22489"
                     /db_xref="CDD:411917"
     Site            order(390..391,393..395,397..398,400..401,404..405,409,
                     414,416..417,419,430)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:411917"
     CDS             1..599
                     /gene="FUBP3"
                     /coded_by="XM_061154397.1:21..1820"
                     /db_xref="GeneID:133064381"
ORIGIN      
        1 maelvqgqsa pvgmkaegfv dalhrvrqah trqacsslra leqavssawn alphhiaaki
       61 dsiphlnnst plvdpsvygy gvqkrplddg vgnqlgalvh qraviteefk vpdkmvgfii
      121 grggeqisri qaesgckiqi asessgiper pcvltgtpes ieqakrllgq ivdrcrngpg
      181 fhnetdgnst iqeilipask vglvigkgge tikqlqertg vkmvmiqdgp lptgadkplr
      241 itgdafkvqq aremvleiir ekdqadfrgv rgdfssrmgg gsievsvprf avgivigrng
      301 emikkiqnda gvriqfkpdd gisperaaqv mgppdrcqha ahviselilt aqerdgfggl
      361 avargrgrgr gdwnvgtpgg vqevtytvpa dkcglvigkg geniksinqq sgahvelqrn
      421 pppstdpnlr iftirglppq ievarhlide kvggtslgap gpfgqspfsq ppaaphqntf
      481 pprssgcfpn iaakvngnph sapvsgppaf ltqgwgstyq awqqptqqvp sqqsqpqssq
      541 pdyskawedy ykkqshaasa apqastppdy tmawaeyyrq qvafygqtlg qaqapnqeq
//
LOCUS       XP_061010381             598 aa            linear   MAM 02-DEC-2023
DEFINITION  far upstream element-binding protein 3 isoform X2 [Dama dama].
ACCESSION   XP_061010381
VERSION     XP_061010381.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154398.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..598
                     /product="far upstream element-binding protein 3 isoform
                     X2"
                     /calculated_mol_wt=64142
     Region          104..174
                     /region_name="KH-I_FUBP3_rpt1"
                     /note="first type I K homology (KH) RNA-binding domain
                     found in far upstream element-binding protein 3 (FUBP3)
                     and similar proteins; cd22480"
                     /db_xref="CDD:411908"
     Site            order(113,115..117,119..123,126..127,130..131,136..139)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:411908"
     Region          185..267
                     /region_name="KH-I_FUBP3_rpt2"
                     /note="second type I K homology (KH) RNA-binding domain
                     found in far upstream element-binding protein 3 (FUBP3)
                     and similar proteins; cd22483"
                     /db_xref="CDD:411911"
     Site            order(198,200..202,204..208,211..212,215..216,221..224)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:411911"
     Region          278..347
                     /region_name="KH-I_FUBP3_rpt3"
                     /note="third type I K homology (KH) RNA-binding domain
                     found in far upstream element-binding protein 3 (FUBP3)
                     and similar proteins; cd22486"
                     /db_xref="CDD:411914"
     Site            order(288..293,295..299,302..303,312,314..315,325)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:411914"
     Region          382..450
                     /region_name="KH-I_FUBP3_rpt4"
                     /note="fourth type I K homology (KH) RNA-binding domain
                     found in far upstream element-binding protein 3 (FUBP3)
                     and similar proteins; cd22489"
                     /db_xref="CDD:411917"
     Site            order(389..390,392..394,396..397,399..400,403..404,408,
                     413,415..416,418,429)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:411917"
     CDS             1..598
                     /gene="FUBP3"
                     /coded_by="XM_061154398.1:21..1817"
                     /db_xref="GeneID:133064381"
ORIGIN      
        1 maelvqgqsa pvgmkaegfv dalhrvrqah trqacsslra leqavssawn alphhiaaki
       61 dsiphlnnst plvdpsvygy gvqkrplddg gnqlgalvhq raviteefkv pdkmvgfiig
      121 rggeqisriq aesgckiqia sessgiperp cvltgtpesi eqakrllgqi vdrcrngpgf
      181 hnetdgnsti qeilipaskv glvigkgget ikqlqertgv kmvmiqdgpl ptgadkplri
      241 tgdafkvqqa remvleiire kdqadfrgvr gdfssrmggg sievsvprfa vgivigrnge
      301 mikkiqndag vriqfkpddg isperaaqvm gppdrcqhaa hviselilta qerdgfggla
      361 vargrgrgrg dwnvgtpggv qevtytvpad kcglvigkgg eniksinqqs gahvelqrnp
      421 ppstdpnlri ftirglppqi evarhlidek vggtslgapg pfgqspfsqp paaphqntfp
      481 prssgcfpni aakvngnphs apvsgppafl tqgwgstyqa wqqptqqvps qqsqpqssqp
      541 dyskawedyy kkqshaasaa pqastppdyt mawaeyyrqq vafygqtlgq aqapnqeq
//
LOCUS       XP_061010382             572 aa            linear   MAM 02-DEC-2023
DEFINITION  far upstream element-binding protein 3 isoform X3 [Dama dama].
ACCESSION   XP_061010382
VERSION     XP_061010382.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154399.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..572
                     /product="far upstream element-binding protein 3 isoform
                     X3"
                     /calculated_mol_wt=61316
     Region          78..148
                     /region_name="KH-I_FUBP3_rpt1"
                     /note="first type I K homology (KH) RNA-binding domain
                     found in far upstream element-binding protein 3 (FUBP3)
                     and similar proteins; cd22480"
                     /db_xref="CDD:411908"
     Site            order(87,89..91,93..97,100..101,104..105,110..113)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:411908"
     Region          159..241
                     /region_name="KH-I_FUBP3_rpt2"
                     /note="second type I K homology (KH) RNA-binding domain
                     found in far upstream element-binding protein 3 (FUBP3)
                     and similar proteins; cd22483"
                     /db_xref="CDD:411911"
     Site            order(172,174..176,178..182,185..186,189..190,195..198)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:411911"
     Region          252..321
                     /region_name="KH-I_FUBP3_rpt3"
                     /note="third type I K homology (KH) RNA-binding domain
                     found in far upstream element-binding protein 3 (FUBP3)
                     and similar proteins; cd22486"
                     /db_xref="CDD:411914"
     Site            order(262..267,269..273,276..277,286,288..289,299)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:411914"
     Region          356..424
                     /region_name="KH-I_FUBP3_rpt4"
                     /note="fourth type I K homology (KH) RNA-binding domain
                     found in far upstream element-binding protein 3 (FUBP3)
                     and similar proteins; cd22489"
                     /db_xref="CDD:411917"
     Site            order(363..364,366..368,370..371,373..374,377..378,382,
                     387,389..390,392,403)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:411917"
     CDS             1..572
                     /gene="FUBP3"
                     /coded_by="XM_061154399.1:48..1766"
                     /db_xref="GeneID:133064381"
ORIGIN      
        1 maelvqgqsa pvgmkaegfv dalhrvrqia akidsiphln nstplvdpsv ygygvqkrpl
       61 ddgvgnqlga lvhqravite efkvpdkmvg fiigrggeqi sriqaesgck iqiasessgi
      121 perpcvltgt pesieqakrl lgqivdrcrn gpgfhnetdg nstiqeilip askvglvigk
      181 ggetikqlqe rtgvkmvmiq dgplptgadk plritgdafk vqqaremvle iirekdqadf
      241 rgvrgdfssr mgggsievsv prfavgivig rngemikkiq ndagvriqfk pddgispera
      301 aqvmgppdrc qhaahvisel iltaqerdgf gglavargrg rgrgdwnvgt pggvqevtyt
      361 vpadkcglvi gkggeniksi nqqsgahvel qrnpppstdp nlriftirgl ppqievarhl
      421 idekvggtsl gapgpfgqsp fsqppaaphq ntfpprssgc fpniaakvng nphsapvsgp
      481 pafltqgwgs tyqawqqptq qvpsqqsqpq ssqpdyskaw edyykkqsha asaapqastp
      541 pdytmawaey yrqqvafygq tlgqaqapnq eq
//
LOCUS       XP_061010384             412 aa            linear   MAM 02-DEC-2023
DEFINITION  argininosuccinate synthase [Dama dama].
ACCESSION   XP_061010384
VERSION     XP_061010384.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154401.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..412
                     /product="argininosuccinate synthase"
                     /calculated_mol_wt=46242
     Region          8..401
                     /region_name="Arginosuc_synth"
                     /note="Arginosuccinate synthase; pfam00764"
                     /db_xref="CDD:279148"
     CDS             1..412
                     /gene="ASS1"
                     /coded_by="XM_061154401.1:55..1293"
                     /db_xref="GeneID:133064382"
ORIGIN      
        1 msgkgsvvla ysggldtsci lvwlkeqgyd viaylanigq kedfeearkk avklgakkvf
       61 iediskefve efiwpaiqss alyedryllg tslarpciar kqveiaqreg akyvshgatg
      121 kgndqirfel tcyslapqik viapwrmpef ynrfqgrndl meyakqhgip vpvtpknpws
      181 mdenlmhisy eagilenpkn qappglytkt qdpakapnsp dtleiefkkg vpvkvtnvgd
      241 gtthstalel flylnevagk hgvgridive nrfigmksrg iyetpagtil yhahldieaf
      301 tmdrevrkik qglglkfael vytgfwhspe cefvrhciak sqervegkvq vsvfkgqvyi
      361 lgresplsly neelvsmnvq gdyepvdatg fininslrlk eyhrlqnkvt ak
//
LOCUS       XP_061010385            5075 aa            linear   MAM 02-DEC-2023
DEFINITION  hemicentin-2 isoform X1 [Dama dama].
ACCESSION   XP_061010385
VERSION     XP_061010385.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154402.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..5075
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..5075
                     /product="hemicentin-2 isoform X1"
                     /calculated_mol_wt=545013
     Region          <23..206
                     /region_name="ChlD"
                     /note="vWFA (von Willebrand factor type A) domain of Mg
                     and Co chelatases [Coenzyme transport and metabolism];
                     COG1240"
                     /db_xref="CDD:440853"
     Region          432..512
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          443..447
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          456..460
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          478..482
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          492..497
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          523..603
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          533..537
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          546..550
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          569..573
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          583..588
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          596..599
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          607..691
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          624..628
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409564"
     Region          637..641
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409564"
     Region          660..663
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409564"
     Region          673..678
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409564"
     Region          686..689
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409564"
     Region          704..781
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          714..718
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          727..731
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          747..751
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          761..766
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          791..874
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          802..806
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          815..819
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          840..844
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          854..859
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          867..870
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          880..967
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          897..901
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          911..915
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          933..937
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          947..952
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          960..963
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          970..1045
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          1074..1149
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          1086..1090
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1099..1103
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1122..1126
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1136..1141
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1149..1152
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1159..1227
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          1256..1335
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          1264..1268
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1277..1281
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1301..1305
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1315..1320
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1328..1331
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1349..1428
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          1358..1362
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1371..1375
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1394..1398
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1408..1413
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1421..1424
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1443..1520
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          1451..1455
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1464..1468
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1487..1492
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1502..1507
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1537..1615
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          1538..1542
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1558..1562
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1581..1585
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1595..1600
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1618..1695
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          1724..1802
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          1732..1736
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1745..1749
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1768..1772
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1782..1787
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1795..1798
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1822..1886
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          1824..1828
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1837..1841
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1852..1856
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1866..1871
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1879..1882
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1890..1970
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          1907..1911
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1920..1924
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1943..1947
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1957..1962
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1970..1973
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1980..2056
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          2075..2162
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          2092..2096
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2105..2109
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2128..2132
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          2142..2147
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2155..2158
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          2165..2243
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          2271..2350
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          2280..2284
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2293..2297
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2316..2320
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          2330..2335
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2364..2446
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          2374..2378
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2387..2391
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2410..2414
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          2424..2429
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2437..2440
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          2459..2537
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          2467..2471
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2480..2484
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2503..2507
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          2517..2522
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2530..2533
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          2555..2634
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          2563..2567
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2576..2580
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2614..2619
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2627..2630
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          2652..2724
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          2663..2666
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2675..2679
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2697..2702
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          2712..2717
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2765..2842
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          2772..2776
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2785..2789
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2809..2812
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          2822..2827
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2835..2838
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          2865..2937
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          2867..2871
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2880..2884
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2902..2907
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          2917..2922
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2941..3029
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          2959..2963
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2972..2976
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2995..2999
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          3009..3014
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3033..3124
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          3054..3058
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3067..3071
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          3104..3109
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3117..3120
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          3127..3204
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          3221..3299
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          3316..3406
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          3336..3340
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3349..3353
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          3372..3376
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          3386..3391
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3409..3480
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          3513..3586
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          3518..3522
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3531..3535
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          3553..3556
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          3566..3571
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3579..3582
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          3601..3679
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          3609..3613
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3622..3626
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          3645..3649
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          3659..3664
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3672..3675
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          3683..3771
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          3700..3704
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3713..3717
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          3737..3740
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          3750..3755
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3763..3766
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          3774..3856
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          3791..3795
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3804..3808
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          3829..3833
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          3843..3848
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3869..3954
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          3884..3888
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3897..3901
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          3920..3924
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          3934..3939
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3947..3950
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          3964..4044
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          3975..3979
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3988..3992
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          4010..4014
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          4024..4029
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          4048..4135
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          4065..4069
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409568"
     Region          4078..4082
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409568"
     Region          4101..4105
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409568"
     Region          4115..4120
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409568"
     Region          4128..4131
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409568"
     Region          4139..4224
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          4156..4160
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          4169..4173
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          4191..4194
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          4204..4209
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          4242..4314
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          4246..4250
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          4259..4263
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          4281..4285
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          4295..4300
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          4308..4311
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          4319..4405
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          4336..4340
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          4349..4353
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          4371..4375
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          4385..4390
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          4398..4401
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          4407..4621
                     /region_name="nidG2"
                     /note="Nidogen, G2 domain; Nidogen is an important
                     component of the basement membrane, an extracellular
                     sheet-like matrix. Nidogen is a multifunctional protein
                     that interacts with many other basement membrane proteins,
                     like collagen, perlecan, lamin, and has a...; cl00186"
                     /db_xref="CDD:469646"
     Site            order(4411,4431,4433,4439,4441,4443,4604,4609,4613,4615)
                     /site_type="other"
                     /note="collagen/perlecan interaction surface [polypeptide
                     binding]"
                     /db_xref="CDD:238158"
     Region          4648..4683
                     /region_name="FXa_inhibition"
                     /note="Coagulation Factor Xa inhibitory site; pfam14670"
                     /db_xref="CDD:464251"
     Region          4685..4729
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(4685,4688,4704)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          4730..>4762
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(4730,4733,4749)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          4773..4813
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(4773,4776,4790)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          4879..4918
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(4879,4882,4895)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          4919..4957
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(4919,4922,4938)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..5075
                     /gene="HMCN2"
                     /coded_by="XM_061154402.1:1..15228"
                     /db_xref="GeneID:133064383"
ORIGIN      
        1 mrprapllrl llavsaaaaa vvdepgtals pttggatlai vfdvtgsmwd dlmqvldgas
       61 rilerslsrg srvianyalv pfhdpdigpv tltsdpavfq relrelyvqg ggdcpemslg
      121 aikaavevan pgsfiyvfsd arakdyhkkd evlrllqlkq sqvvfvltgd cgdrthpgyl
      181 ayeeiaaass gqvfhldkqq vtevlkwves aiqaskvhll stdheeggeh twripfdpsl
      241 kevtislsgp gpeievrdpl grilqrddgl nvllsipdsa kvvafkpehp glwsikvyss
      301 grhsvritgi snidfragfs tqpsldlnht iewplqgvpi slvinstglr vpgrldsvel
      361 shssgrsllt lptqplsngs ahqlwggppf hspqerfylk vkgkdhegnp llrvsgvsyr
      421 gvtpgaplvs mpprihgylh qplqvscsvh salpfrlqlw regarlgeer rfresgnssw
      481 eipwaskade gmyectavsr agtgraraqi vvtdpppqlv pisnvtvspg etavlsclvl
      541 seapynltwv rdwrvlsast grvtqladls levrnttpsd ggryqcmasn sngvsrasvw
      601 llvreapqvs ihtrsqrfsq gmevrvrcsa sgypaprisw sregralqed srvrvdaqgt
      661 liiqevaped agsyscqaan eigrdeetvt lyytdppsvs avngvvlaae geeavlacea
      721 tgvppprviw yrgdlemila sedsssgmlr ipvvrerdag vytcravnel gdasaeirle
      781 vghapqllel pqdvtvelgr sallacratg rppptitwrr gddqplgprp gsrtgrpdsg
      841 vlffesvvpe dqapyiceaq nvfgkvqaqa hlvvtghapp qiassastvr vlerqpvslp
      901 civlsgrprp errwlkagmp lppgsrhsvr adgslhldqa mledagrysc vvsntagsqh
      961 rdvqlvvqvp priqptathh itnegvpasl pcvasgvptp titwtketna lasgdphynv
     1021 skdgtlvipr psvqdagayv ctatnavgfs sqemwlsvnt kprilvngsh eadkplrvta
     1081 kagdevildc eaqgsppplv twtkdsrpml pmtnrhhlll pgslhlaqaq vsdsglyect
     1141 asnpagsatq yyilrvqvpp qvqpgprvlk vlvgeavdln cvaegnpepr vawskdgval
     1201 qgegpegsvh ftaiqtshag tyrceasssa gvdaweldlr vlepphwgtd etsgllerva
     1261 genaslpcpa rgtpkpqvtw rkgpsseplr grpglavlde gslflasvsp sdggdyecqa
     1321 tneagsasrr aklvvhvpps lredgrranv sgmagqsltl ecdangfpap eitwlkdgrq
     1381 ipavgshrll dgaralhfpr iqegdsglys craenqagia qrdfdllvli ppavlgaeaa
     1441 qevvglagag velecrtsgv ptpqvewtkd grpvflgeph vqlqedgqvl ritnshlgde
     1501 gwyqcvafsp agqqtkdfql riyspptiwg snetsevavm eghpvwflce argvpmpdit
     1561 wfkdgdplvp saevvytrgg rqlqleraqg sdagtyscka snavgvvekt trlevyvppt
     1621 iegtgegprv vkavagrplt lecvargypp ptvswyhegl pvvesngtwl eagggvlsle
     1681 slgeasggly scvasspage avlhysvevq vapqllvaeg lgqvttlvgq sldlpclasg
     1741 fpvptiqwlq ngrpaeelpg vrvalqgtml hidrvelgha glfacqatne agtagaevel
     1801 svhelpsvvi vggenitapf lqpvalrcag tgvptpslrw wkdgaalaas ggslqiekvd
     1861 lkdegtytcv atnlagesrr dvtlkvlvpp niepglvnka vlenasvtle clasgvpppd
     1921 iswfkgrqpv sardrvmvsi dgrillieqa qlsdagsyrc vasnvagste lqynlrvnvp
     1981 pritlppslp gpvllhspvr ltcnatgtps pllmwlkdgn pvstagttgl qvfpggrvlt
     2041 lasarasdsg syscvavsav gedrrdvflh vhmppsflge eqnvsvvane svalecwsya
     2101 vpppvlswrk dgrpleprpg vhlstdkall evdraevgdt grytcealnl vgrsqkhynl
     2161 nvwvppvfps repriltvte ghparlscdc rgvpfpkisw rkdgqplpge gaslgqvfpv
     2221 gqllylgqaq paqegtytce csnvagnssq dqqlvvyvpp qiagpaepya dvsvvqdeea
     2281 slecnatgkp vpsvtwerdg wpvgtqpglr lqnhgqslhv eraqpahagr yscvaeneag
     2341 raerwfslsv lvppeligdl dpltnvtasl hnplslfcea tgvpppevrw frgeepispg
     2401 entyllaggw mlkltraqeq dkgfysclas nkagearrnf svevlvppsi ekedleeavt
     2461 vpegetaqlr cnvsghpqpk vtwfkdgrpl asgdthhvsp dgaflwvlqa nlssaghysc
     2521 vaanaigekt khfqlsvlvv ptilgvteds vdeevtvtin npisliceal afpsptitwm
     2581 kdgapfeasn niqllpagth glqilnaqke dagqytcvvt nelgeavkny hvevlippsi
     2641 skddplgevs vkevktkvns tltlececwa vppptiswyk dgqpvtpnlr vrilgggrll
     2701 qiqptqvsds grylcvatnv ageddqdfnv liqvppmfhk sdatavfetp freeeargrv
     2761 teyrevvenn paylycdtna vpapelswfr edhplsiedg vsilqggrvl qiplvraeda
     2821 gryscrasne agedwlhyel lvltppvilg eteelveevt vnanstvsly cpalgnpapt
     2881 iswlqnglpf spsprlqvle dgrilqvsta evadaasymc vadnpagsae klftlrvqvp
     2941 pritgpnpeq itatinssvs lpcevrahps pevtwykdsr tlslgeegfl lpgthtlqla
     3001 raqlsdsgty tcealnaagr dqklvqlsvl vpptfrqaps rpqdavlvsa gdkavlscet
     3061 dalpaptvaw qkdgqplvla eriqallggq rleiqdaqvs dkglyscrvs naageamraf
     3121 sltvqvpptf enpetetvsq vagsplvlsc dvtgvpaptv twlkdrmpva essvahgvvs
     3181 rggrlqlshl qpdqagtytc maenaqaear kdfvvavlva priwssgttq ehsvlegqdv
     3241 rldceaygqp ppdvvwlkdg rpldlslgpy pwfyldnssl vlkglrasds gaytcvahnv
     3301 agedarlhtv nvlvpptieq gpegagtlvh rlgdlvsmac pvrgsppihv swlkdglplp
     3361 lshrtylhss grtlrisqaq padsgtftcv asspagvanr hfvlqvhvpp vlvpaefqnd
     3421 vavvrgslvf lpceargspl pfvswmkdge pllppsvehg pglllesaet ghagtyscva
     3481 mseagearrh fqltvmdppy iedsgepeel lltpgtplel lcdaqgtpap nitwhkdgqa
     3541 lsspedgkga rrmlqvesvq vgdaglytcl ahspageaek sfrvrvqapp nvigphgprf
     3601 vvglapgqlv lecsveadpa levewhregv llqadahtrf peegrflqlq alstadsgny
     3661 sctarnaags tslafhvevh mvptiqpgpp ivnasvnqtt llpcqadgap rplvswlkdg
     3721 vpldpesprf qvlsegslri qpvlaqdagh ylclasnpag sdrqgrdlrv fepptiapgp
     3781 snltltahtp aslpceasgs pkplvawwkd gqkldfrlhq gtyrllpsna llleapspqd
     3841 saqfecvvsn evgearklyw vtvhvaptia ddqtdftvtv rapvvltchs tgmpapvvsw
     3901 skagtrlgvr gngyrvlpsg aleigqalsi htgrytctar naagmahkhv vltvraspvv
     3961 kplpsvvwav akeeallpce asglprpsia wqkeglsvpa gagtqvlpsg qlriihvspe
     4021 dagnyfclaq nsagsavgkt rlvvqvppai ktglpdlsit egahallpct asgspepnit
     4081 wekdgqpvsg aegkftiqps gellvknses qdagtytcta enavgrarrr vhltilalpv
     4141 fttlpgdrsl rlgdrlwlhc aargsptpri gwtvnnrlvt egvseqdggs tlqrvavtre
     4201 dsgtyicwae nrvghvqavs fvhvkeapvl qgesfsylve pvggsirldc avhgdpapdi
     4261 ywikdglplr gsrlrhrlqn gsliirrtem ddagqyqcla enelgavekv vvlalqsapv
     4321 fqvkpqdvtv rsgdsmalrc qasgepvptv ewlragqpvq asrrlqtlpd gslwlervea
     4381 gdagpyecva hnllgsatar aflvvrgepr gsrgsvigvi ngqkfgaail ntsvqqears
     4441 gvttirssis hiparvgplm rvlvvtiapi ywalagesgd alnghsltgg sfqqeshvef
     4501 atgelltmtq vargldrngl llldmvvngs vpeslvdadl qvqdfqeryv qtgpgrlfvg
     4561 stqsflqdsl rsflrcnhsi qysaaqgpqp qlvqhlrass issafdpeae alrfqldtal
     4621 qaeenevgcp egfeldaqge fcvdrdecsd rprpcshsch napgrfscsc pagfalardg
     4681 rtcrdvdeca weadlcqedq hcvnllgsyh clpdcrpgfr vaangasced vdecleqtde
     4741 chynqiceni pgghrcgcpr gflvqgpglp cldineclql pepcayqchn lqggfrclcp
     4801 pgqallrdgk tctplersgp nvttvshrdl lvawlrarap kpggsyhawv slqpgprals
     4861 vgrawcppgf irqngvctdl decrvrnlcq hacqntegsy qclcpagyrl lpsgkncqdi
     4921 neceedgiec gpgqmcfntr gsyqcvdtpc patyrqgssp gtcfrrcsqd cssggpstlq
     4981 ykllplplgv ralhdvarla afseggvpan rtelrvlepd prspfalrpl ragygavytr
     5041 raltraglyr ltvhaaaprh qsvfvlliav spypy
//
LOCUS       XP_061010386            5074 aa            linear   MAM 02-DEC-2023
DEFINITION  hemicentin-2 isoform X2 [Dama dama].
ACCESSION   XP_061010386
VERSION     XP_061010386.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154403.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..5074
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..5074
                     /product="hemicentin-2 isoform X2"
                     /calculated_mol_wt=544942
     Region          <23..206
                     /region_name="ChlD"
                     /note="vWFA (von Willebrand factor type A) domain of Mg
                     and Co chelatases [Coenzyme transport and metabolism];
                     COG1240"
                     /db_xref="CDD:440853"
     Region          432..512
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          443..447
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          456..460
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          478..482
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          492..497
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          523..603
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          533..537
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          546..550
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          569..573
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          583..588
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          596..599
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          607..691
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          624..628
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409564"
     Region          637..641
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409564"
     Region          660..663
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409564"
     Region          673..678
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409564"
     Region          686..689
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409564"
     Region          704..781
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          714..718
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          727..731
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          747..751
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          761..766
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          791..874
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          802..806
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          815..819
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          840..844
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          854..859
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          867..870
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          880..967
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          897..901
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          911..915
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          933..937
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          947..952
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          960..963
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          970..1045
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          1074..1149
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          1086..1090
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1099..1103
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1122..1126
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1136..1141
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1149..1152
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1159..1227
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          1256..1335
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          1264..1268
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1277..1281
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1301..1305
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1315..1320
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1328..1331
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1349..1428
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          1358..1362
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1371..1375
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1394..1398
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1408..1413
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1421..1424
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1443..1520
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          1451..1455
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1464..1468
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1487..1492
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1502..1507
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1537..1615
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          1538..1542
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1558..1562
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1581..1585
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1595..1600
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1618..1695
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          1724..1802
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          1732..1736
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1745..1749
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1768..1772
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1782..1787
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1795..1798
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1822..1886
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          1824..1828
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1837..1841
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1852..1856
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1866..1871
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1879..1882
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1890..1970
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          1907..1911
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1920..1924
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1943..1947
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1957..1962
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1970..1973
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1980..2056
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          2075..2162
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          2092..2096
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2105..2109
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2128..2132
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          2142..2147
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2155..2158
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          2165..2243
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          2271..2350
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          2280..2284
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2293..2297
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2316..2320
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          2330..2335
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2364..2446
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          2374..2378
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2387..2391
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2410..2414
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          2424..2429
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2437..2440
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          2459..2537
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          2467..2471
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2480..2484
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2503..2507
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          2517..2522
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2530..2533
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          2555..2633
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          2563..2567
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2576..2580
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2600..2603
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          2613..2618
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2626..2629
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          2651..2723
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          2662..2665
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2674..2678
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2696..2701
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          2711..2716
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2764..2841
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          2771..2775
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2784..2788
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2808..2811
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          2821..2826
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2834..2837
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          2864..2936
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          2866..2870
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2879..2883
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2901..2906
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          2916..2921
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2940..3028
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          2958..2962
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2971..2975
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2994..2998
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          3008..3013
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3032..3123
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          3053..3057
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3066..3070
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          3103..3108
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3116..3119
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          3126..3203
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          3220..3298
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          3315..3405
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          3335..3339
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3348..3352
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          3371..3375
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          3385..3390
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3408..3479
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          3512..3585
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          3517..3521
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3530..3534
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          3552..3555
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          3565..3570
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3578..3581
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          3600..3678
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          3608..3612
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3621..3625
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          3644..3648
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          3658..3663
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3671..3674
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          3682..3770
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          3699..3703
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3712..3716
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          3736..3739
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          3749..3754
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3762..3765
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          3773..3855
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          3790..3794
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3803..3807
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          3828..3832
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          3842..3847
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3868..3953
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          3883..3887
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3896..3900
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          3919..3923
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          3933..3938
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3946..3949
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          3963..4043
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          3974..3978
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3987..3991
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          4009..4013
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          4023..4028
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          4047..4134
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          4064..4068
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409568"
     Region          4077..4081
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409568"
     Region          4100..4104
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409568"
     Region          4114..4119
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409568"
     Region          4127..4130
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409568"
     Region          4138..4223
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          4155..4159
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          4168..4172
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          4190..4193
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          4203..4208
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          4241..4313
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          4245..4249
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          4258..4262
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          4280..4284
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          4294..4299
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          4307..4310
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          4318..4404
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          4335..4339
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          4348..4352
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          4370..4374
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          4384..4389
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          4397..4400
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          4406..4620
                     /region_name="nidG2"
                     /note="Nidogen, G2 domain; Nidogen is an important
                     component of the basement membrane, an extracellular
                     sheet-like matrix. Nidogen is a multifunctional protein
                     that interacts with many other basement membrane proteins,
                     like collagen, perlecan, lamin, and has a...; cl00186"
                     /db_xref="CDD:469646"
     Site            order(4410,4430,4432,4438,4440,4442,4603,4608,4612,4614)
                     /site_type="other"
                     /note="collagen/perlecan interaction surface [polypeptide
                     binding]"
                     /db_xref="CDD:238158"
     Region          4647..4682
                     /region_name="FXa_inhibition"
                     /note="Coagulation Factor Xa inhibitory site; pfam14670"
                     /db_xref="CDD:464251"
     Region          4684..4728
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(4684,4687,4703)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          4729..>4761
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(4729,4732,4748)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          4772..4812
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(4772,4775,4789)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          4878..4917
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(4878,4881,4894)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          4918..4956
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(4918,4921,4937)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..5074
                     /gene="HMCN2"
                     /coded_by="XM_061154403.1:1..15225"
                     /db_xref="GeneID:133064383"
ORIGIN      
        1 mrprapllrl llavsaaaaa vvdepgtals pttggatlai vfdvtgsmwd dlmqvldgas
       61 rilerslsrg srvianyalv pfhdpdigpv tltsdpavfq relrelyvqg ggdcpemslg
      121 aikaavevan pgsfiyvfsd arakdyhkkd evlrllqlkq sqvvfvltgd cgdrthpgyl
      181 ayeeiaaass gqvfhldkqq vtevlkwves aiqaskvhll stdheeggeh twripfdpsl
      241 kevtislsgp gpeievrdpl grilqrddgl nvllsipdsa kvvafkpehp glwsikvyss
      301 grhsvritgi snidfragfs tqpsldlnht iewplqgvpi slvinstglr vpgrldsvel
      361 shssgrsllt lptqplsngs ahqlwggppf hspqerfylk vkgkdhegnp llrvsgvsyr
      421 gvtpgaplvs mpprihgylh qplqvscsvh salpfrlqlw regarlgeer rfresgnssw
      481 eipwaskade gmyectavsr agtgraraqi vvtdpppqlv pisnvtvspg etavlsclvl
      541 seapynltwv rdwrvlsast grvtqladls levrnttpsd ggryqcmasn sngvsrasvw
      601 llvreapqvs ihtrsqrfsq gmevrvrcsa sgypaprisw sregralqed srvrvdaqgt
      661 liiqevaped agsyscqaan eigrdeetvt lyytdppsvs avngvvlaae geeavlacea
      721 tgvppprviw yrgdlemila sedsssgmlr ipvvrerdag vytcravnel gdasaeirle
      781 vghapqllel pqdvtvelgr sallacratg rppptitwrr gddqplgprp gsrtgrpdsg
      841 vlffesvvpe dqapyiceaq nvfgkvqaqa hlvvtghapp qiassastvr vlerqpvslp
      901 civlsgrprp errwlkagmp lppgsrhsvr adgslhldqa mledagrysc vvsntagsqh
      961 rdvqlvvqvp priqptathh itnegvpasl pcvasgvptp titwtketna lasgdphynv
     1021 skdgtlvipr psvqdagayv ctatnavgfs sqemwlsvnt kprilvngsh eadkplrvta
     1081 kagdevildc eaqgsppplv twtkdsrpml pmtnrhhlll pgslhlaqaq vsdsglyect
     1141 asnpagsatq yyilrvqvpp qvqpgprvlk vlvgeavdln cvaegnpepr vawskdgval
     1201 qgegpegsvh ftaiqtshag tyrceasssa gvdaweldlr vlepphwgtd etsgllerva
     1261 genaslpcpa rgtpkpqvtw rkgpsseplr grpglavlde gslflasvsp sdggdyecqa
     1321 tneagsasrr aklvvhvpps lredgrranv sgmagqsltl ecdangfpap eitwlkdgrq
     1381 ipavgshrll dgaralhfpr iqegdsglys craenqagia qrdfdllvli ppavlgaeaa
     1441 qevvglagag velecrtsgv ptpqvewtkd grpvflgeph vqlqedgqvl ritnshlgde
     1501 gwyqcvafsp agqqtkdfql riyspptiwg snetsevavm eghpvwflce argvpmpdit
     1561 wfkdgdplvp saevvytrgg rqlqleraqg sdagtyscka snavgvvekt trlevyvppt
     1621 iegtgegprv vkavagrplt lecvargypp ptvswyhegl pvvesngtwl eagggvlsle
     1681 slgeasggly scvasspage avlhysvevq vapqllvaeg lgqvttlvgq sldlpclasg
     1741 fpvptiqwlq ngrpaeelpg vrvalqgtml hidrvelgha glfacqatne agtagaevel
     1801 svhelpsvvi vggenitapf lqpvalrcag tgvptpslrw wkdgaalaas ggslqiekvd
     1861 lkdegtytcv atnlagesrr dvtlkvlvpp niepglvnka vlenasvtle clasgvpppd
     1921 iswfkgrqpv sardrvmvsi dgrillieqa qlsdagsyrc vasnvagste lqynlrvnvp
     1981 pritlppslp gpvllhspvr ltcnatgtps pllmwlkdgn pvstagttgl qvfpggrvlt
     2041 lasarasdsg syscvavsav gedrrdvflh vhmppsflge eqnvsvvane svalecwsya
     2101 vpppvlswrk dgrpleprpg vhlstdkall evdraevgdt grytcealnl vgrsqkhynl
     2161 nvwvppvfps repriltvte ghparlscdc rgvpfpkisw rkdgqplpge gaslgqvfpv
     2221 gqllylgqaq paqegtytce csnvagnssq dqqlvvyvpp qiagpaepya dvsvvqdeea
     2281 slecnatgkp vpsvtwerdg wpvgtqpglr lqnhgqslhv eraqpahagr yscvaeneag
     2341 raerwfslsv lvppeligdl dpltnvtasl hnplslfcea tgvpppevrw frgeepispg
     2401 entyllaggw mlkltraqeq dkgfysclas nkagearrnf svevlvppsi ekedleeavt
     2461 vpegetaqlr cnvsghpqpk vtwfkdgrpl asgdthhvsp dgaflwvlqa nlssaghysc
     2521 vaanaigekt khfqlsvlvv ptilgvteds vdeevtvtin npisliceal afpsptitwm
     2581 kdgapfeasn niqllpgthg lqilnaqked agqytcvvtn elgeavknyh vevlippsis
     2641 kddplgevsv kevktkvnst ltlececwav ppptiswykd gqpvtpnlrv rilgggrllq
     2701 iqptqvsdsg rylcvatnva geddqdfnvl iqvppmfhks datavfetpf reeeargrvt
     2761 eyrevvennp aylycdtnav papelswfre dhplsiedgv silqggrvlq iplvraedag
     2821 ryscrasnea gedwlhyell vltppvilge teelveevtv nanstvslyc palgnpapti
     2881 swlqnglpfs psprlqvled grilqvstae vadaasymcv adnpagsaek lftlrvqvpp
     2941 ritgpnpeqi tatinssvsl pcevrahpsp evtwykdsrt lslgeegfll pgthtlqlar
     3001 aqlsdsgtyt cealnaagrd qklvqlsvlv pptfrqapsr pqdavlvsag dkavlscetd
     3061 alpaptvawq kdgqplvlae riqallggqr leiqdaqvsd kglyscrvsn aageamrafs
     3121 ltvqvpptfe npetetvsqv agsplvlscd vtgvpaptvt wlkdrmpvae ssvahgvvsr
     3181 ggrlqlshlq pdqagtytcm aenaqaeark dfvvavlvap riwssgttqe hsvlegqdvr
     3241 ldceaygqpp pdvvwlkdgr pldlslgpyp wfyldnsslv lkglrasdsg aytcvahnva
     3301 gedarlhtvn vlvpptieqg pegagtlvhr lgdlvsmacp vrgsppihvs wlkdglplpl
     3361 shrtylhssg rtlrisqaqp adsgtftcva sspagvanrh fvlqvhvppv lvpaefqndv
     3421 avvrgslvfl pceargsplp fvswmkdgep llppsvehgp glllesaetg hagtyscvam
     3481 seagearrhf qltvmdppyi edsgepeell ltpgtplell cdaqgtpapn itwhkdgqal
     3541 sspedgkgar rmlqvesvqv gdaglytcla hspageaeks frvrvqappn vigphgprfv
     3601 vglapgqlvl ecsveadpal evewhregvl lqadahtrfp eegrflqlqa lstadsgnys
     3661 ctarnaagst slafhvevhm vptiqpgppi vnasvnqttl lpcqadgapr plvswlkdgv
     3721 pldpesprfq vlsegslriq pvlaqdaghy lclasnpags drqgrdlrvf epptiapgps
     3781 nltltahtpa slpceasgsp kplvawwkdg qkldfrlhqg tyrllpsnal lleapspqds
     3841 aqfecvvsne vgearklywv tvhvaptiad dqtdftvtvr apvvltchst gmpapvvsws
     3901 kagtrlgvrg ngyrvlpsga leigqalsih tgrytctarn aagmahkhvv ltvraspvvk
     3961 plpsvvwava keeallpcea sglprpsiaw qkeglsvpag agtqvlpsgq lriihvsped
     4021 agnyfclaqn sagsavgktr lvvqvppaik tglpdlsite gahallpcta sgspepnitw
     4081 ekdgqpvsga egkftiqpsg ellvknsesq dagtytctae navgrarrrv hltilalpvf
     4141 ttlpgdrslr lgdrlwlhca argsptprig wtvnnrlvte gvseqdggst lqrvavtred
     4201 sgtyicwaen rvghvqavsf vhvkeapvlq gesfsylvep vggsirldca vhgdpapdiy
     4261 wikdglplrg srlrhrlqng sliirrtemd dagqyqclae nelgavekvv vlalqsapvf
     4321 qvkpqdvtvr sgdsmalrcq asgepvptve wlragqpvqa srrlqtlpdg slwlerveag
     4381 dagpyecvah nllgsatara flvvrgeprg srgsvigvin gqkfgaailn tsvqqearsg
     4441 vttirssish iparvgplmr vlvvtiapiy walagesgda lnghsltggs fqqeshvefa
     4501 tgelltmtqv argldrngll lldmvvngsv peslvdadlq vqdfqeryvq tgpgrlfvgs
     4561 tqsflqdslr sflrcnhsiq ysaaqgpqpq lvqhlrassi ssafdpeaea lrfqldtalq
     4621 aeenevgcpe gfeldaqgef cvdrdecsdr prpcshschn apgrfscscp agfalardgr
     4681 tcrdvdecaw eadlcqedqh cvnllgsyhc lpdcrpgfrv aangascedv decleqtdec
     4741 hynqicenip gghrcgcprg flvqgpglpc ldineclqlp epcayqchnl qggfrclcpp
     4801 gqallrdgkt ctplersgpn vttvshrdll vawlrarapk pggsyhawvs lqpgpralsv
     4861 grawcppgfi rqngvctdld ecrvrnlcqh acqntegsyq clcpagyrll psgkncqdin
     4921 eceedgiecg pgqmcfntrg syqcvdtpcp atyrqgsspg tcfrrcsqdc ssggpstlqy
     4981 kllplplgvr alhdvarlaa fseggvpanr telrvlepdp rspfalrplr agygavytrr
     5041 altraglyrl tvhaaaprhq svfvlliavs pypy
//
LOCUS       XP_061010387            5074 aa            linear   MAM 02-DEC-2023
DEFINITION  hemicentin-2 isoform X3 [Dama dama].
ACCESSION   XP_061010387
VERSION     XP_061010387.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154404.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..5074
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..5074
                     /product="hemicentin-2 isoform X3"
                     /calculated_mol_wt=544942
     Region          <23..206
                     /region_name="ChlD"
                     /note="vWFA (von Willebrand factor type A) domain of Mg
                     and Co chelatases [Coenzyme transport and metabolism];
                     COG1240"
                     /db_xref="CDD:440853"
     Region          432..512
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          443..447
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          456..460
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          478..482
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          492..497
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          523..603
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          533..537
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          546..550
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          569..573
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          583..588
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          596..599
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          607..691
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          624..628
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409564"
     Region          637..641
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409564"
     Region          660..663
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409564"
     Region          673..678
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409564"
     Region          686..689
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409564"
     Region          704..781
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          714..718
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          727..731
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          747..751
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          761..766
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          791..874
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          802..806
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          815..819
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          840..844
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          854..859
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          867..870
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          880..967
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          897..901
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          911..915
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          933..937
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          947..952
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          960..963
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          970..1045
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          1074..1149
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          1086..1090
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1099..1103
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1122..1126
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1136..1141
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1149..1152
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1159..1227
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          1256..1335
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          1264..1268
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1277..1281
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1301..1305
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1315..1320
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1328..1331
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1349..1428
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          1358..1362
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1371..1375
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1394..1398
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1408..1413
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1421..1424
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1443..1520
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          1451..1455
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1464..1468
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1487..1492
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1502..1507
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1537..1615
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          1538..1542
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1558..1562
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1581..1585
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1595..1600
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1618..1695
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          1724..1802
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          1732..1736
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1745..1749
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1768..1772
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1782..1787
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1795..1798
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1822..1886
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          1824..1828
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1837..1841
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1852..1856
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1866..1871
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1879..1882
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1890..1970
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          1907..1911
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1920..1924
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1943..1947
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1957..1962
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1970..1973
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1980..2056
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          2075..2162
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          2092..2096
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2105..2109
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2128..2132
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          2142..2147
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2155..2158
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          2165..2243
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          2271..2350
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          2280..2284
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2293..2297
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2316..2320
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          2330..2335
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2364..2446
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          2374..2378
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2387..2391
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2410..2414
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          2424..2429
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2437..2440
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          2459..2537
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          2467..2471
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2480..2484
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2503..2507
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          2517..2522
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2530..2533
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          2555..2634
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          2563..2567
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2576..2580
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2614..2619
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2627..2630
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          2652..2724
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          2663..2666
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2675..2679
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2697..2702
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          2712..2717
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2765..2842
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          2772..2776
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2785..2789
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2809..2812
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          2822..2827
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2835..2838
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          2865..2937
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          2867..2871
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2880..2884
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2902..2907
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          2917..2922
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2941..3029
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          2959..2963
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2972..2976
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2995..2999
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          3009..3014
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3033..3124
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          3054..3058
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3067..3071
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          3104..3109
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3117..3120
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          3127..3203
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          3220..3298
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          3315..3405
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          3335..3339
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3348..3352
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          3371..3375
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          3385..3390
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3408..3479
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          3512..3585
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          3517..3521
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3530..3534
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          3552..3555
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          3565..3570
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3578..3581
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          3600..3678
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          3608..3612
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3621..3625
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          3644..3648
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          3658..3663
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3671..3674
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          3682..3770
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          3699..3703
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3712..3716
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          3736..3739
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          3749..3754
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3762..3765
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          3773..3855
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          3790..3794
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3803..3807
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          3828..3832
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          3842..3847
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3868..3953
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          3883..3887
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3896..3900
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          3919..3923
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          3933..3938
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3946..3949
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          3963..4043
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          3974..3978
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3987..3991
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          4009..4013
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          4023..4028
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          4047..4134
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          4064..4068
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409568"
     Region          4077..4081
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409568"
     Region          4100..4104
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409568"
     Region          4114..4119
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409568"
     Region          4127..4130
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409568"
     Region          4138..4223
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          4155..4159
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          4168..4172
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          4190..4193
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          4203..4208
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          4241..4313
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          4245..4249
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          4258..4262
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          4280..4284
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          4294..4299
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          4307..4310
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          4318..4404
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          4335..4339
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          4348..4352
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          4370..4374
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          4384..4389
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          4397..4400
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          4406..4620
                     /region_name="nidG2"
                     /note="Nidogen, G2 domain; Nidogen is an important
                     component of the basement membrane, an extracellular
                     sheet-like matrix. Nidogen is a multifunctional protein
                     that interacts with many other basement membrane proteins,
                     like collagen, perlecan, lamin, and has a...; cl00186"
                     /db_xref="CDD:469646"
     Site            order(4410,4430,4432,4438,4440,4442,4603,4608,4612,4614)
                     /site_type="other"
                     /note="collagen/perlecan interaction surface [polypeptide
                     binding]"
                     /db_xref="CDD:238158"
     Region          4647..4682
                     /region_name="FXa_inhibition"
                     /note="Coagulation Factor Xa inhibitory site; pfam14670"
                     /db_xref="CDD:464251"
     Region          4684..4728
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(4684,4687,4703)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          4729..>4761
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(4729,4732,4748)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          4772..4812
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(4772,4775,4789)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          4878..4917
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(4878,4881,4894)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          4918..4956
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(4918,4921,4937)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..5074
                     /gene="HMCN2"
                     /coded_by="XM_061154404.1:1..15225"
                     /db_xref="GeneID:133064383"
ORIGIN      
        1 mrprapllrl llavsaaaaa vvdepgtals pttggatlai vfdvtgsmwd dlmqvldgas
       61 rilerslsrg srvianyalv pfhdpdigpv tltsdpavfq relrelyvqg ggdcpemslg
      121 aikaavevan pgsfiyvfsd arakdyhkkd evlrllqlkq sqvvfvltgd cgdrthpgyl
      181 ayeeiaaass gqvfhldkqq vtevlkwves aiqaskvhll stdheeggeh twripfdpsl
      241 kevtislsgp gpeievrdpl grilqrddgl nvllsipdsa kvvafkpehp glwsikvyss
      301 grhsvritgi snidfragfs tqpsldlnht iewplqgvpi slvinstglr vpgrldsvel
      361 shssgrsllt lptqplsngs ahqlwggppf hspqerfylk vkgkdhegnp llrvsgvsyr
      421 gvtpgaplvs mpprihgylh qplqvscsvh salpfrlqlw regarlgeer rfresgnssw
      481 eipwaskade gmyectavsr agtgraraqi vvtdpppqlv pisnvtvspg etavlsclvl
      541 seapynltwv rdwrvlsast grvtqladls levrnttpsd ggryqcmasn sngvsrasvw
      601 llvreapqvs ihtrsqrfsq gmevrvrcsa sgypaprisw sregralqed srvrvdaqgt
      661 liiqevaped agsyscqaan eigrdeetvt lyytdppsvs avngvvlaae geeavlacea
      721 tgvppprviw yrgdlemila sedsssgmlr ipvvrerdag vytcravnel gdasaeirle
      781 vghapqllel pqdvtvelgr sallacratg rppptitwrr gddqplgprp gsrtgrpdsg
      841 vlffesvvpe dqapyiceaq nvfgkvqaqa hlvvtghapp qiassastvr vlerqpvslp
      901 civlsgrprp errwlkagmp lppgsrhsvr adgslhldqa mledagrysc vvsntagsqh
      961 rdvqlvvqvp priqptathh itnegvpasl pcvasgvptp titwtketna lasgdphynv
     1021 skdgtlvipr psvqdagayv ctatnavgfs sqemwlsvnt kprilvngsh eadkplrvta
     1081 kagdevildc eaqgsppplv twtkdsrpml pmtnrhhlll pgslhlaqaq vsdsglyect
     1141 asnpagsatq yyilrvqvpp qvqpgprvlk vlvgeavdln cvaegnpepr vawskdgval
     1201 qgegpegsvh ftaiqtshag tyrceasssa gvdaweldlr vlepphwgtd etsgllerva
     1261 genaslpcpa rgtpkpqvtw rkgpsseplr grpglavlde gslflasvsp sdggdyecqa
     1321 tneagsasrr aklvvhvpps lredgrranv sgmagqsltl ecdangfpap eitwlkdgrq
     1381 ipavgshrll dgaralhfpr iqegdsglys craenqagia qrdfdllvli ppavlgaeaa
     1441 qevvglagag velecrtsgv ptpqvewtkd grpvflgeph vqlqedgqvl ritnshlgde
     1501 gwyqcvafsp agqqtkdfql riyspptiwg snetsevavm eghpvwflce argvpmpdit
     1561 wfkdgdplvp saevvytrgg rqlqleraqg sdagtyscka snavgvvekt trlevyvppt
     1621 iegtgegprv vkavagrplt lecvargypp ptvswyhegl pvvesngtwl eagggvlsle
     1681 slgeasggly scvasspage avlhysvevq vapqllvaeg lgqvttlvgq sldlpclasg
     1741 fpvptiqwlq ngrpaeelpg vrvalqgtml hidrvelgha glfacqatne agtagaevel
     1801 svhelpsvvi vggenitapf lqpvalrcag tgvptpslrw wkdgaalaas ggslqiekvd
     1861 lkdegtytcv atnlagesrr dvtlkvlvpp niepglvnka vlenasvtle clasgvpppd
     1921 iswfkgrqpv sardrvmvsi dgrillieqa qlsdagsyrc vasnvagste lqynlrvnvp
     1981 pritlppslp gpvllhspvr ltcnatgtps pllmwlkdgn pvstagttgl qvfpggrvlt
     2041 lasarasdsg syscvavsav gedrrdvflh vhmppsflge eqnvsvvane svalecwsya
     2101 vpppvlswrk dgrpleprpg vhlstdkall evdraevgdt grytcealnl vgrsqkhynl
     2161 nvwvppvfps repriltvte ghparlscdc rgvpfpkisw rkdgqplpge gaslgqvfpv
     2221 gqllylgqaq paqegtytce csnvagnssq dqqlvvyvpp qiagpaepya dvsvvqdeea
     2281 slecnatgkp vpsvtwerdg wpvgtqpglr lqnhgqslhv eraqpahagr yscvaeneag
     2341 raerwfslsv lvppeligdl dpltnvtasl hnplslfcea tgvpppevrw frgeepispg
     2401 entyllaggw mlkltraqeq dkgfysclas nkagearrnf svevlvppsi ekedleeavt
     2461 vpegetaqlr cnvsghpqpk vtwfkdgrpl asgdthhvsp dgaflwvlqa nlssaghysc
     2521 vaanaigekt khfqlsvlvv ptilgvteds vdeevtvtin npisliceal afpsptitwm
     2581 kdgapfeasn niqllpagth glqilnaqke dagqytcvvt nelgeavkny hvevlippsi
     2641 skddplgevs vkevktkvns tltlececwa vppptiswyk dgqpvtpnlr vrilgggrll
     2701 qiqptqvsds grylcvatnv ageddqdfnv liqvppmfhk sdatavfetp freeeargrv
     2761 teyrevvenn paylycdtna vpapelswfr edhplsiedg vsilqggrvl qiplvraeda
     2821 gryscrasne agedwlhyel lvltppvilg eteelveevt vnanstvsly cpalgnpapt
     2881 iswlqnglpf spsprlqvle dgrilqvsta evadaasymc vadnpagsae klftlrvqvp
     2941 pritgpnpeq itatinssvs lpcevrahps pevtwykdsr tlslgeegfl lpgthtlqla
     3001 raqlsdsgty tcealnaagr dqklvqlsvl vpptfrqaps rpqdavlvsa gdkavlscet
     3061 dalpaptvaw qkdgqplvla eriqallggq rleiqdaqvs dkglyscrvs naageamraf
     3121 sltvqvpptf enpetetvsq vagsplvlsc dvtgvpaptv twlkdrmpve ssvahgvvsr
     3181 ggrlqlshlq pdqagtytcm aenaqaeark dfvvavlvap riwssgttqe hsvlegqdvr
     3241 ldceaygqpp pdvvwlkdgr pldlslgpyp wfyldnsslv lkglrasdsg aytcvahnva
     3301 gedarlhtvn vlvpptieqg pegagtlvhr lgdlvsmacp vrgsppihvs wlkdglplpl
     3361 shrtylhssg rtlrisqaqp adsgtftcva sspagvanrh fvlqvhvppv lvpaefqndv
     3421 avvrgslvfl pceargsplp fvswmkdgep llppsvehgp glllesaetg hagtyscvam
     3481 seagearrhf qltvmdppyi edsgepeell ltpgtplell cdaqgtpapn itwhkdgqal
     3541 sspedgkgar rmlqvesvqv gdaglytcla hspageaeks frvrvqappn vigphgprfv
     3601 vglapgqlvl ecsveadpal evewhregvl lqadahtrfp eegrflqlqa lstadsgnys
     3661 ctarnaagst slafhvevhm vptiqpgppi vnasvnqttl lpcqadgapr plvswlkdgv
     3721 pldpesprfq vlsegslriq pvlaqdaghy lclasnpags drqgrdlrvf epptiapgps
     3781 nltltahtpa slpceasgsp kplvawwkdg qkldfrlhqg tyrllpsnal lleapspqds
     3841 aqfecvvsne vgearklywv tvhvaptiad dqtdftvtvr apvvltchst gmpapvvsws
     3901 kagtrlgvrg ngyrvlpsga leigqalsih tgrytctarn aagmahkhvv ltvraspvvk
     3961 plpsvvwava keeallpcea sglprpsiaw qkeglsvpag agtqvlpsgq lriihvsped
     4021 agnyfclaqn sagsavgktr lvvqvppaik tglpdlsite gahallpcta sgspepnitw
     4081 ekdgqpvsga egkftiqpsg ellvknsesq dagtytctae navgrarrrv hltilalpvf
     4141 ttlpgdrslr lgdrlwlhca argsptprig wtvnnrlvte gvseqdggst lqrvavtred
     4201 sgtyicwaen rvghvqavsf vhvkeapvlq gesfsylvep vggsirldca vhgdpapdiy
     4261 wikdglplrg srlrhrlqng sliirrtemd dagqyqclae nelgavekvv vlalqsapvf
     4321 qvkpqdvtvr sgdsmalrcq asgepvptve wlragqpvqa srrlqtlpdg slwlerveag
     4381 dagpyecvah nllgsatara flvvrgeprg srgsvigvin gqkfgaailn tsvqqearsg
     4441 vttirssish iparvgplmr vlvvtiapiy walagesgda lnghsltggs fqqeshvefa
     4501 tgelltmtqv argldrngll lldmvvngsv peslvdadlq vqdfqeryvq tgpgrlfvgs
     4561 tqsflqdslr sflrcnhsiq ysaaqgpqpq lvqhlrassi ssafdpeaea lrfqldtalq
     4621 aeenevgcpe gfeldaqgef cvdrdecsdr prpcshschn apgrfscscp agfalardgr
     4681 tcrdvdecaw eadlcqedqh cvnllgsyhc lpdcrpgfrv aangascedv decleqtdec
     4741 hynqicenip gghrcgcprg flvqgpglpc ldineclqlp epcayqchnl qggfrclcpp
     4801 gqallrdgkt ctplersgpn vttvshrdll vawlrarapk pggsyhawvs lqpgpralsv
     4861 grawcppgfi rqngvctdld ecrvrnlcqh acqntegsyq clcpagyrll psgkncqdin
     4921 eceedgiecg pgqmcfntrg syqcvdtpcp atyrqgsspg tcfrrcsqdc ssggpstlqy
     4981 kllplplgvr alhdvarlaa fseggvpanr telrvlepdp rspfalrplr agygavytrr
     5041 altraglyrl tvhaaaprhq svfvlliavs pypy
//
LOCUS       XP_061010388            5073 aa            linear   MAM 02-DEC-2023
DEFINITION  hemicentin-2 isoform X4 [Dama dama].
ACCESSION   XP_061010388
VERSION     XP_061010388.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154405.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..5073
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..5073
                     /product="hemicentin-2 isoform X4"
                     /calculated_mol_wt=544871
     Region          <23..206
                     /region_name="ChlD"
                     /note="vWFA (von Willebrand factor type A) domain of Mg
                     and Co chelatases [Coenzyme transport and metabolism];
                     COG1240"
                     /db_xref="CDD:440853"
     Region          432..512
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          443..447
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          456..460
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          478..482
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          492..497
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          523..603
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          533..537
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          546..550
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          569..573
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          583..588
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          596..599
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          607..691
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          624..628
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409564"
     Region          637..641
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409564"
     Region          660..663
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409564"
     Region          673..678
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409564"
     Region          686..689
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409564"
     Region          704..781
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          714..718
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          727..731
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          747..751
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          761..766
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          791..874
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          802..806
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          815..819
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          840..844
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          854..859
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          867..870
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          880..967
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          897..901
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          911..915
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          933..937
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          947..952
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          960..963
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          970..1045
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          1074..1149
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          1086..1090
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1099..1103
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1122..1126
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1136..1141
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1149..1152
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1159..1227
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          1256..1335
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          1264..1268
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1277..1281
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1301..1305
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1315..1320
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1328..1331
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1349..1428
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          1358..1362
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1371..1375
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1394..1398
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1408..1413
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1421..1424
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1443..1520
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          1451..1455
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1464..1468
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1487..1492
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1502..1507
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1537..1615
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          1538..1542
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1558..1562
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1581..1585
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1595..1600
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1618..1695
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          1724..1802
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          1732..1736
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1745..1749
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1768..1772
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1782..1787
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1795..1798
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1822..1886
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          1824..1828
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1837..1841
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1852..1856
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1866..1871
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1879..1882
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1890..1970
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          1907..1911
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1920..1924
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1943..1947
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1957..1962
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1970..1973
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1980..2056
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          2075..2162
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          2092..2096
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2105..2109
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2128..2132
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          2142..2147
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2155..2158
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          2165..2243
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          2271..2350
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          2280..2284
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2293..2297
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2316..2320
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          2330..2335
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2364..2446
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          2374..2378
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2387..2391
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2410..2414
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          2424..2429
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2437..2440
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          2459..2537
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          2467..2471
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2480..2484
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2503..2507
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          2517..2522
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2530..2533
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          2555..2633
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          2563..2567
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2576..2580
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2600..2603
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          2613..2618
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2626..2629
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          2651..2723
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          2662..2665
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2674..2678
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2696..2701
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          2711..2716
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2764..2841
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          2771..2775
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2784..2788
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2808..2811
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          2821..2826
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2834..2837
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          2864..2936
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          2866..2870
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2879..2883
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2901..2906
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          2916..2921
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2940..3028
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          2958..2962
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2971..2975
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2994..2998
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          3008..3013
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3032..3123
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          3053..3057
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3066..3070
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          3103..3108
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3116..3119
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          3126..3202
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          3219..3297
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          3314..3404
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          3334..3338
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3347..3351
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          3370..3374
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          3384..3389
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3407..3478
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          3511..3584
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          3516..3520
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3529..3533
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          3551..3554
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          3564..3569
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3577..3580
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          3599..3677
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          3607..3611
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3620..3624
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          3643..3647
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          3657..3662
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3670..3673
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          3681..3769
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          3698..3702
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3711..3715
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          3735..3738
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          3748..3753
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3761..3764
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          3772..3854
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          3789..3793
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3802..3806
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          3827..3831
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          3841..3846
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3867..3952
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          3882..3886
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3895..3899
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          3918..3922
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          3932..3937
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3945..3948
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          3962..4042
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          3973..3977
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3986..3990
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          4008..4012
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          4022..4027
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          4046..4133
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          4063..4067
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409568"
     Region          4076..4080
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409568"
     Region          4099..4103
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409568"
     Region          4113..4118
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409568"
     Region          4126..4129
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409568"
     Region          4137..4222
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          4154..4158
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          4167..4171
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          4189..4192
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          4202..4207
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          4240..4312
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          4244..4248
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          4257..4261
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          4279..4283
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          4293..4298
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          4306..4309
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          4317..4403
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          4334..4338
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          4347..4351
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          4369..4373
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          4383..4388
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          4396..4399
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          4405..4619
                     /region_name="nidG2"
                     /note="Nidogen, G2 domain; Nidogen is an important
                     component of the basement membrane, an extracellular
                     sheet-like matrix. Nidogen is a multifunctional protein
                     that interacts with many other basement membrane proteins,
                     like collagen, perlecan, lamin, and has a...; cl00186"
                     /db_xref="CDD:469646"
     Site            order(4409,4429,4431,4437,4439,4441,4602,4607,4611,4613)
                     /site_type="other"
                     /note="collagen/perlecan interaction surface [polypeptide
                     binding]"
                     /db_xref="CDD:238158"
     Region          4646..4681
                     /region_name="FXa_inhibition"
                     /note="Coagulation Factor Xa inhibitory site; pfam14670"
                     /db_xref="CDD:464251"
     Region          4683..4727
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(4683,4686,4702)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          4728..>4760
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(4728,4731,4747)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          4771..4811
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(4771,4774,4788)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          4877..4916
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(4877,4880,4893)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          4917..4955
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(4917,4920,4936)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..5073
                     /gene="HMCN2"
                     /coded_by="XM_061154405.1:1..15222"
                     /db_xref="GeneID:133064383"
ORIGIN      
        1 mrprapllrl llavsaaaaa vvdepgtals pttggatlai vfdvtgsmwd dlmqvldgas
       61 rilerslsrg srvianyalv pfhdpdigpv tltsdpavfq relrelyvqg ggdcpemslg
      121 aikaavevan pgsfiyvfsd arakdyhkkd evlrllqlkq sqvvfvltgd cgdrthpgyl
      181 ayeeiaaass gqvfhldkqq vtevlkwves aiqaskvhll stdheeggeh twripfdpsl
      241 kevtislsgp gpeievrdpl grilqrddgl nvllsipdsa kvvafkpehp glwsikvyss
      301 grhsvritgi snidfragfs tqpsldlnht iewplqgvpi slvinstglr vpgrldsvel
      361 shssgrsllt lptqplsngs ahqlwggppf hspqerfylk vkgkdhegnp llrvsgvsyr
      421 gvtpgaplvs mpprihgylh qplqvscsvh salpfrlqlw regarlgeer rfresgnssw
      481 eipwaskade gmyectavsr agtgraraqi vvtdpppqlv pisnvtvspg etavlsclvl
      541 seapynltwv rdwrvlsast grvtqladls levrnttpsd ggryqcmasn sngvsrasvw
      601 llvreapqvs ihtrsqrfsq gmevrvrcsa sgypaprisw sregralqed srvrvdaqgt
      661 liiqevaped agsyscqaan eigrdeetvt lyytdppsvs avngvvlaae geeavlacea
      721 tgvppprviw yrgdlemila sedsssgmlr ipvvrerdag vytcravnel gdasaeirle
      781 vghapqllel pqdvtvelgr sallacratg rppptitwrr gddqplgprp gsrtgrpdsg
      841 vlffesvvpe dqapyiceaq nvfgkvqaqa hlvvtghapp qiassastvr vlerqpvslp
      901 civlsgrprp errwlkagmp lppgsrhsvr adgslhldqa mledagrysc vvsntagsqh
      961 rdvqlvvqvp priqptathh itnegvpasl pcvasgvptp titwtketna lasgdphynv
     1021 skdgtlvipr psvqdagayv ctatnavgfs sqemwlsvnt kprilvngsh eadkplrvta
     1081 kagdevildc eaqgsppplv twtkdsrpml pmtnrhhlll pgslhlaqaq vsdsglyect
     1141 asnpagsatq yyilrvqvpp qvqpgprvlk vlvgeavdln cvaegnpepr vawskdgval
     1201 qgegpegsvh ftaiqtshag tyrceasssa gvdaweldlr vlepphwgtd etsgllerva
     1261 genaslpcpa rgtpkpqvtw rkgpsseplr grpglavlde gslflasvsp sdggdyecqa
     1321 tneagsasrr aklvvhvpps lredgrranv sgmagqsltl ecdangfpap eitwlkdgrq
     1381 ipavgshrll dgaralhfpr iqegdsglys craenqagia qrdfdllvli ppavlgaeaa
     1441 qevvglagag velecrtsgv ptpqvewtkd grpvflgeph vqlqedgqvl ritnshlgde
     1501 gwyqcvafsp agqqtkdfql riyspptiwg snetsevavm eghpvwflce argvpmpdit
     1561 wfkdgdplvp saevvytrgg rqlqleraqg sdagtyscka snavgvvekt trlevyvppt
     1621 iegtgegprv vkavagrplt lecvargypp ptvswyhegl pvvesngtwl eagggvlsle
     1681 slgeasggly scvasspage avlhysvevq vapqllvaeg lgqvttlvgq sldlpclasg
     1741 fpvptiqwlq ngrpaeelpg vrvalqgtml hidrvelgha glfacqatne agtagaevel
     1801 svhelpsvvi vggenitapf lqpvalrcag tgvptpslrw wkdgaalaas ggslqiekvd
     1861 lkdegtytcv atnlagesrr dvtlkvlvpp niepglvnka vlenasvtle clasgvpppd
     1921 iswfkgrqpv sardrvmvsi dgrillieqa qlsdagsyrc vasnvagste lqynlrvnvp
     1981 pritlppslp gpvllhspvr ltcnatgtps pllmwlkdgn pvstagttgl qvfpggrvlt
     2041 lasarasdsg syscvavsav gedrrdvflh vhmppsflge eqnvsvvane svalecwsya
     2101 vpppvlswrk dgrpleprpg vhlstdkall evdraevgdt grytcealnl vgrsqkhynl
     2161 nvwvppvfps repriltvte ghparlscdc rgvpfpkisw rkdgqplpge gaslgqvfpv
     2221 gqllylgqaq paqegtytce csnvagnssq dqqlvvyvpp qiagpaepya dvsvvqdeea
     2281 slecnatgkp vpsvtwerdg wpvgtqpglr lqnhgqslhv eraqpahagr yscvaeneag
     2341 raerwfslsv lvppeligdl dpltnvtasl hnplslfcea tgvpppevrw frgeepispg
     2401 entyllaggw mlkltraqeq dkgfysclas nkagearrnf svevlvppsi ekedleeavt
     2461 vpegetaqlr cnvsghpqpk vtwfkdgrpl asgdthhvsp dgaflwvlqa nlssaghysc
     2521 vaanaigekt khfqlsvlvv ptilgvteds vdeevtvtin npisliceal afpsptitwm
     2581 kdgapfeasn niqllpgthg lqilnaqked agqytcvvtn elgeavknyh vevlippsis
     2641 kddplgevsv kevktkvnst ltlececwav ppptiswykd gqpvtpnlrv rilgggrllq
     2701 iqptqvsdsg rylcvatnva geddqdfnvl iqvppmfhks datavfetpf reeeargrvt
     2761 eyrevvennp aylycdtnav papelswfre dhplsiedgv silqggrvlq iplvraedag
     2821 ryscrasnea gedwlhyell vltppvilge teelveevtv nanstvslyc palgnpapti
     2881 swlqnglpfs psprlqvled grilqvstae vadaasymcv adnpagsaek lftlrvqvpp
     2941 ritgpnpeqi tatinssvsl pcevrahpsp evtwykdsrt lslgeegfll pgthtlqlar
     3001 aqlsdsgtyt cealnaagrd qklvqlsvlv pptfrqapsr pqdavlvsag dkavlscetd
     3061 alpaptvawq kdgqplvlae riqallggqr leiqdaqvsd kglyscrvsn aageamrafs
     3121 ltvqvpptfe npetetvsqv agsplvlscd vtgvpaptvt wlkdrmpves svahgvvsrg
     3181 grlqlshlqp dqagtytcma enaqaearkd fvvavlvapr iwssgttqeh svlegqdvrl
     3241 dceaygqppp dvvwlkdgrp ldlslgpypw fyldnsslvl kglrasdsga ytcvahnvag
     3301 edarlhtvnv lvpptieqgp egagtlvhrl gdlvsmacpv rgsppihvsw lkdglplpls
     3361 hrtylhssgr tlrisqaqpa dsgtftcvas spagvanrhf vlqvhvppvl vpaefqndva
     3421 vvrgslvflp ceargsplpf vswmkdgepl lppsvehgpg lllesaetgh agtyscvams
     3481 eagearrhfq ltvmdppyie dsgepeelll tpgtplellc daqgtpapni twhkdgqals
     3541 spedgkgarr mlqvesvqvg daglytclah spageaeksf rvrvqappnv igphgprfvv
     3601 glapgqlvle csveadpale vewhregvll qadahtrfpe egrflqlqal stadsgnysc
     3661 tarnaagsts lafhvevhmv ptiqpgppiv nasvnqttll pcqadgaprp lvswlkdgvp
     3721 ldpesprfqv lsegslriqp vlaqdaghyl clasnpagsd rqgrdlrvfe pptiapgpsn
     3781 ltltahtpas lpceasgspk plvawwkdgq kldfrlhqgt yrllpsnall leapspqdsa
     3841 qfecvvsnev gearklywvt vhvaptiadd qtdftvtvra pvvltchstg mpapvvswsk
     3901 agtrlgvrgn gyrvlpsgal eigqalsiht grytctarna agmahkhvvl tvraspvvkp
     3961 lpsvvwavak eeallpceas glprpsiawq keglsvpaga gtqvlpsgql riihvspeda
     4021 gnyfclaqns agsavgktrl vvqvppaikt glpdlsiteg ahallpctas gspepnitwe
     4081 kdgqpvsgae gkftiqpsge llvknsesqd agtytctaen avgrarrrvh ltilalpvft
     4141 tlpgdrslrl gdrlwlhcaa rgsptprigw tvnnrlvteg vseqdggstl qrvavtreds
     4201 gtyicwaenr vghvqavsfv hvkeapvlqg esfsylvepv ggsirldcav hgdpapdiyw
     4261 ikdglplrgs rlrhrlqngs liirrtemdd agqyqclaen elgavekvvv lalqsapvfq
     4321 vkpqdvtvrs gdsmalrcqa sgepvptvew lragqpvqas rrlqtlpdgs lwlerveagd
     4381 agpyecvahn llgsataraf lvvrgeprgs rgsvigving qkfgaailnt svqqearsgv
     4441 ttirssishi parvgplmrv lvvtiapiyw alagesgdal nghsltggsf qqeshvefat
     4501 gelltmtqva rgldrnglll ldmvvngsvp eslvdadlqv qdfqeryvqt gpgrlfvgst
     4561 qsflqdslrs flrcnhsiqy saaqgpqpql vqhlrassis safdpeaeal rfqldtalqa
     4621 eenevgcpeg feldaqgefc vdrdecsdrp rpcshschna pgrfscscpa gfalardgrt
     4681 crdvdecawe adlcqedqhc vnllgsyhcl pdcrpgfrva angascedvd ecleqtdech
     4741 ynqicenipg ghrcgcprgf lvqgpglpcl dineclqlpe pcayqchnlq ggfrclcppg
     4801 qallrdgktc tplersgpnv ttvshrdllv awlrarapkp ggsyhawvsl qpgpralsvg
     4861 rawcppgfir qngvctdlde crvrnlcqha cqntegsyqc lcpagyrllp sgkncqdine
     4921 ceedgiecgp gqmcfntrgs yqcvdtpcpa tyrqgsspgt cfrrcsqdcs sggpstlqyk
     4981 llplplgvra lhdvarlaaf seggvpanrt elrvlepdpr spfalrplra gygavytrra
     5041 ltraglyrlt vhaaaprhqs vfvlliavsp ypy
//
LOCUS       XP_061010389            4329 aa            linear   MAM 02-DEC-2023
DEFINITION  hemicentin-2 isoform X5 [Dama dama].
ACCESSION   XP_061010389
VERSION     XP_061010389.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154406.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4329
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..4329
                     /product="hemicentin-2 isoform X5"
                     /calculated_mol_wt=464112
     Region          <23..206
                     /region_name="ChlD"
                     /note="vWFA (von Willebrand factor type A) domain of Mg
                     and Co chelatases [Coenzyme transport and metabolism];
                     COG1240"
                     /db_xref="CDD:440853"
     Region          432..512
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          443..447
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          456..460
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          478..482
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          492..497
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          523..603
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          533..537
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          546..550
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          569..573
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          583..588
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          596..599
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          607..691
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          624..628
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409564"
     Region          637..641
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409564"
     Region          660..663
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409564"
     Region          673..678
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409564"
     Region          686..689
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409564"
     Region          704..781
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          714..718
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          727..731
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          747..751
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          761..766
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          791..874
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          802..806
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          815..819
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          840..844
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          854..859
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          867..870
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          880..967
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          897..901
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          911..915
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          933..937
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          947..952
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          960..963
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          970..1045
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          1074..1149
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          1086..1090
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1099..1103
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1122..1126
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1136..1141
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1149..1152
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1159..1227
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          1256..1335
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          1264..1268
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1277..1281
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1301..1305
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1315..1320
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1328..1331
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1349..1428
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          1358..1362
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1371..1375
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1394..1398
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1408..1413
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1421..1424
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1443..1520
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          1451..1455
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1464..1468
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1487..1492
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1502..1507
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1537..1615
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          1538..1542
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1558..1562
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1581..1585
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1595..1600
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1618..1695
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          1724..1802
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          1732..1736
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1745..1749
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1768..1772
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1782..1787
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1795..1798
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1822..1886
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          1824..1828
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1837..1841
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1852..1856
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1866..1871
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1879..1882
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1890..1970
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          1907..1911
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1920..1924
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1943..1947
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1957..1962
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1970..1973
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1980..2056
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          2075..2162
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          2092..2096
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2105..2109
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2128..2132
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          2142..2147
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2155..2158
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          2165..2243
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          2271..2350
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          2280..2284
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2293..2297
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2316..2320
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          2330..2335
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2364..2446
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          2374..2378
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2387..2391
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2410..2414
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          2424..2429
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2437..2440
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          2459..2537
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          2467..2471
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2480..2484
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2503..2507
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          2517..2522
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2530..2533
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          2555..2634
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          2563..2567
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2576..2580
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2614..2619
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2627..2630
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          2652..2724
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          2663..2666
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2675..2679
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2697..2702
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          2712..2717
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2765..2842
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          2772..2776
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2785..2789
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2809..2812
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          2822..2827
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2835..2838
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          2865..2937
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          2867..2871
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2880..2884
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2902..2907
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          2917..2922
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          2941..3029
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          2959..2963
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          2972..2976
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          2995..2999
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          3009..3014
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3033..3124
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          3054..3058
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3067..3071
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          3104..3109
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3117..3120
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          3127..3204
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          3221..3299
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          3316..3406
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          3336..3340
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3349..3353
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          3372..3376
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          3386..3391
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3409..3480
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          3513..3586
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          3518..3522
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3531..3535
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          3553..3556
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          3566..3571
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3579..3582
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          3601..3679
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          3609..3613
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3622..3626
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          3645..3649
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          3659..3664
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3672..3675
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          3683..3771
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          3700..3704
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3713..3717
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          3737..3740
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          3750..3755
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3763..3766
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          3774..3856
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          3791..3795
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3804..3808
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          3829..3833
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          3843..3848
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3869..3954
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          3884..3888
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3897..3901
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          3920..3924
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          3934..3939
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          3947..3950
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          3964..4044
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          3975..3979
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          3988..3992
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          4010..4014
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          4024..4029
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          4048..4135
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          4065..4069
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409568"
     Region          4078..4082
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409568"
     Region          4101..4105
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409568"
     Region          4115..4120
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409568"
     Region          4128..4131
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409568"
     Region          4139..4224
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          4156..4160
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          4169..4173
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          4191..4194
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          4204..4209
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          4242..4314
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          4246..4250
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          4259..4263
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          4281..4285
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          4295..4300
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          4308..4311
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..4329
                     /gene="HMCN2"
                     /coded_by="XM_061154406.1:1..12990"
                     /db_xref="GeneID:133064383"
ORIGIN      
        1 mrprapllrl llavsaaaaa vvdepgtals pttggatlai vfdvtgsmwd dlmqvldgas
       61 rilerslsrg srvianyalv pfhdpdigpv tltsdpavfq relrelyvqg ggdcpemslg
      121 aikaavevan pgsfiyvfsd arakdyhkkd evlrllqlkq sqvvfvltgd cgdrthpgyl
      181 ayeeiaaass gqvfhldkqq vtevlkwves aiqaskvhll stdheeggeh twripfdpsl
      241 kevtislsgp gpeievrdpl grilqrddgl nvllsipdsa kvvafkpehp glwsikvyss
      301 grhsvritgi snidfragfs tqpsldlnht iewplqgvpi slvinstglr vpgrldsvel
      361 shssgrsllt lptqplsngs ahqlwggppf hspqerfylk vkgkdhegnp llrvsgvsyr
      421 gvtpgaplvs mpprihgylh qplqvscsvh salpfrlqlw regarlgeer rfresgnssw
      481 eipwaskade gmyectavsr agtgraraqi vvtdpppqlv pisnvtvspg etavlsclvl
      541 seapynltwv rdwrvlsast grvtqladls levrnttpsd ggryqcmasn sngvsrasvw
      601 llvreapqvs ihtrsqrfsq gmevrvrcsa sgypaprisw sregralqed srvrvdaqgt
      661 liiqevaped agsyscqaan eigrdeetvt lyytdppsvs avngvvlaae geeavlacea
      721 tgvppprviw yrgdlemila sedsssgmlr ipvvrerdag vytcravnel gdasaeirle
      781 vghapqllel pqdvtvelgr sallacratg rppptitwrr gddqplgprp gsrtgrpdsg
      841 vlffesvvpe dqapyiceaq nvfgkvqaqa hlvvtghapp qiassastvr vlerqpvslp
      901 civlsgrprp errwlkagmp lppgsrhsvr adgslhldqa mledagrysc vvsntagsqh
      961 rdvqlvvqvp priqptathh itnegvpasl pcvasgvptp titwtketna lasgdphynv
     1021 skdgtlvipr psvqdagayv ctatnavgfs sqemwlsvnt kprilvngsh eadkplrvta
     1081 kagdevildc eaqgsppplv twtkdsrpml pmtnrhhlll pgslhlaqaq vsdsglyect
     1141 asnpagsatq yyilrvqvpp qvqpgprvlk vlvgeavdln cvaegnpepr vawskdgval
     1201 qgegpegsvh ftaiqtshag tyrceasssa gvdaweldlr vlepphwgtd etsgllerva
     1261 genaslpcpa rgtpkpqvtw rkgpsseplr grpglavlde gslflasvsp sdggdyecqa
     1321 tneagsasrr aklvvhvpps lredgrranv sgmagqsltl ecdangfpap eitwlkdgrq
     1381 ipavgshrll dgaralhfpr iqegdsglys craenqagia qrdfdllvli ppavlgaeaa
     1441 qevvglagag velecrtsgv ptpqvewtkd grpvflgeph vqlqedgqvl ritnshlgde
     1501 gwyqcvafsp agqqtkdfql riyspptiwg snetsevavm eghpvwflce argvpmpdit
     1561 wfkdgdplvp saevvytrgg rqlqleraqg sdagtyscka snavgvvekt trlevyvppt
     1621 iegtgegprv vkavagrplt lecvargypp ptvswyhegl pvvesngtwl eagggvlsle
     1681 slgeasggly scvasspage avlhysvevq vapqllvaeg lgqvttlvgq sldlpclasg
     1741 fpvptiqwlq ngrpaeelpg vrvalqgtml hidrvelgha glfacqatne agtagaevel
     1801 svhelpsvvi vggenitapf lqpvalrcag tgvptpslrw wkdgaalaas ggslqiekvd
     1861 lkdegtytcv atnlagesrr dvtlkvlvpp niepglvnka vlenasvtle clasgvpppd
     1921 iswfkgrqpv sardrvmvsi dgrillieqa qlsdagsyrc vasnvagste lqynlrvnvp
     1981 pritlppslp gpvllhspvr ltcnatgtps pllmwlkdgn pvstagttgl qvfpggrvlt
     2041 lasarasdsg syscvavsav gedrrdvflh vhmppsflge eqnvsvvane svalecwsya
     2101 vpppvlswrk dgrpleprpg vhlstdkall evdraevgdt grytcealnl vgrsqkhynl
     2161 nvwvppvfps repriltvte ghparlscdc rgvpfpkisw rkdgqplpge gaslgqvfpv
     2221 gqllylgqaq paqegtytce csnvagnssq dqqlvvyvpp qiagpaepya dvsvvqdeea
     2281 slecnatgkp vpsvtwerdg wpvgtqpglr lqnhgqslhv eraqpahagr yscvaeneag
     2341 raerwfslsv lvppeligdl dpltnvtasl hnplslfcea tgvpppevrw frgeepispg
     2401 entyllaggw mlkltraqeq dkgfysclas nkagearrnf svevlvppsi ekedleeavt
     2461 vpegetaqlr cnvsghpqpk vtwfkdgrpl asgdthhvsp dgaflwvlqa nlssaghysc
     2521 vaanaigekt khfqlsvlvv ptilgvteds vdeevtvtin npisliceal afpsptitwm
     2581 kdgapfeasn niqllpagth glqilnaqke dagqytcvvt nelgeavkny hvevlippsi
     2641 skddplgevs vkevktkvns tltlececwa vppptiswyk dgqpvtpnlr vrilgggrll
     2701 qiqptqvsds grylcvatnv ageddqdfnv liqvppmfhk sdatavfetp freeeargrv
     2761 teyrevvenn paylycdtna vpapelswfr edhplsiedg vsilqggrvl qiplvraeda
     2821 gryscrasne agedwlhyel lvltppvilg eteelveevt vnanstvsly cpalgnpapt
     2881 iswlqnglpf spsprlqvle dgrilqvsta evadaasymc vadnpagsae klftlrvqvp
     2941 pritgpnpeq itatinssvs lpcevrahps pevtwykdsr tlslgeegfl lpgthtlqla
     3001 raqlsdsgty tcealnaagr dqklvqlsvl vpptfrqaps rpqdavlvsa gdkavlscet
     3061 dalpaptvaw qkdgqplvla eriqallggq rleiqdaqvs dkglyscrvs naageamraf
     3121 sltvqvpptf enpetetvsq vagsplvlsc dvtgvpaptv twlkdrmpva essvahgvvs
     3181 rggrlqlshl qpdqagtytc maenaqaear kdfvvavlva priwssgttq ehsvlegqdv
     3241 rldceaygqp ppdvvwlkdg rpldlslgpy pwfyldnssl vlkglrasds gaytcvahnv
     3301 agedarlhtv nvlvpptieq gpegagtlvh rlgdlvsmac pvrgsppihv swlkdglplp
     3361 lshrtylhss grtlrisqaq padsgtftcv asspagvanr hfvlqvhvpp vlvpaefqnd
     3421 vavvrgslvf lpceargspl pfvswmkdge pllppsvehg pglllesaet ghagtyscva
     3481 mseagearrh fqltvmdppy iedsgepeel lltpgtplel lcdaqgtpap nitwhkdgqa
     3541 lsspedgkga rrmlqvesvq vgdaglytcl ahspageaek sfrvrvqapp nvigphgprf
     3601 vvglapgqlv lecsveadpa levewhregv llqadahtrf peegrflqlq alstadsgny
     3661 sctarnaags tslafhvevh mvptiqpgpp ivnasvnqtt llpcqadgap rplvswlkdg
     3721 vpldpesprf qvlsegslri qpvlaqdagh ylclasnpag sdrqgrdlrv fepptiapgp
     3781 snltltahtp aslpceasgs pkplvawwkd gqkldfrlhq gtyrllpsna llleapspqd
     3841 saqfecvvsn evgearklyw vtvhvaptia ddqtdftvtv rapvvltchs tgmpapvvsw
     3901 skagtrlgvr gngyrvlpsg aleigqalsi htgrytctar naagmahkhv vltvraspvv
     3961 kplpsvvwav akeeallpce asglprpsia wqkeglsvpa gagtqvlpsg qlriihvspe
     4021 dagnyfclaq nsagsavgkt rlvvqvppai ktglpdlsit egahallpct asgspepnit
     4081 wekdgqpvsg aegkftiqps gellvknses qdagtytcta enavgrarrr vhltilalpv
     4141 fttlpgdrsl rlgdrlwlhc aargsptpri gwtvnnrlvt egvseqdggs tlqrvavtre
     4201 dsgtyicwae nrvghvqavs fvhvkeapvl qgesfsylve pvggsirldc avhgdpapdi
     4261 ywikdglplr gsrlrhrlqn gsliirrtem ddagqyqcla enelgavekv vvlalqshpt
     4321 esgapfatq
//
LOCUS       XP_061010390             190 aa            linear   MAM 02-DEC-2023
DEFINITION  neuronal calcium sensor 1 [Dama dama].
ACCESSION   XP_061010390
VERSION     XP_061010390.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154407.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..190
                     /product="neuronal calcium sensor 1"
                     /calculated_mol_wt=21748
     Region          22..174
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..190
                     /gene="NCS1"
                     /coded_by="XM_061154407.1:39..611"
                     /db_xref="GeneID:133064384"
ORIGIN      
        1 mgksnsklkp evveeltrkt yftekevqqw ykgfikdcps gqldaagfqk iykqffpfgd
       61 ptkfatfvfn vfdenkdgri efsefiqals vtsrgtldek lrwafklydl dndgyitrne
      121 mldivdaiyq mvgntvelpe eentpekrvd rifammdkna dgkltlqefq egskadpsiv
      181 qalslydglv
//
LOCUS       XP_061010391             556 aa            linear   MAM 02-DEC-2023
DEFINITION  protein GPR107 [Dama dama].
ACCESSION   XP_061010391
VERSION     XP_061010391.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154408.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..556
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..556
                     /product="protein GPR107"
                     /calculated_mol_wt=62243
     Region          219..509
                     /region_name="Lung_7-TM_R"
                     /note="Lung seven transmembrane receptor; pfam06814"
                     /db_xref="CDD:369089"
     CDS             1..556
                     /gene="GPR107"
                     /coded_by="XM_061154408.1:39..1709"
                     /db_xref="GeneID:133064385"
ORIGIN      
        1 maapapvgps gsrsprlaag lrlfpvlgll qllaepglgr vhhlalkddv rhkvhlntfg
       61 ffkngymkvn vsslsvnepk gatdkdstig fsldrtkndg fssyldedvn ycilkkqsas
      121 vtllilnisr sevkirsppe agtqlpkiif tkdekvvgqn repgvdpvsa gsqapkeqes
      181 gkskrstvds katgeksfsv rnndgavsfq fffnistddq eglyslyfhk clrsdvwsnd
      241 kfsfsldiei teknpdsyls ageiplpkly ismaffffls gtiwihilrk rrndvfkihw
      301 lmaalpftks lslvfhaidy hyissqgfpi egwavvyyit hllkgallfi tialigtgwa
      361 fikhilsdkd kkvfmvvipl qvlanvayii iesteegate yglwkdslfl vdllccgail
      421 fpvvwsirhl qeasatdgka ainlaklklf rhyyvlivcy iyftriiafl lklavpfqwk
      481 wlyqlldema tlvffvltgy kfrpasdnpy lqlsqeeddl emesvvttsg vmesmkkvkk
      541 vtngsvepqg dwegsa
//
LOCUS       XP_061010393             160 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein eL21-like [Dama dama].
ACCESSION   XP_061010393
VERSION     XP_061010393.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154410.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..160
                     /product="large ribosomal subunit protein eL21-like"
                     /calculated_mol_wt=18376
     Region          1..160
                     /region_name="PTZ00189"
                     /note="60S ribosomal protein L21; Provisional"
                     /db_xref="CDD:240309"
     CDS             1..160
                     /gene="LOC133064386"
                     /coded_by="XM_061154410.1:60..542"
                     /db_xref="GeneID:133064386"
ORIGIN      
        1 mtntkgkrrg trymfsrpfr khgvvplaty mriykkgdiv dikgmgtvqk gmphkcyhgk
       61 tgrvynvtqh avgiivnkqv kgkilakrin vriehikhsk srdsflkhvk endqkkkeak
      121 ekgtwvqlkc qpappreahf vrtngkepel lepipyefma
//
LOCUS       XP_061010394             616 aa            linear   MAM 02-DEC-2023
DEFINITION  formin-binding protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061010394
VERSION     XP_061010394.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154411.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..616
                     /product="formin-binding protein 1 isoform X1"
                     /calculated_mol_wt=71003
     Region          6..257
                     /region_name="F-BAR_FBP17"
                     /note="The F-BAR (FES-CIP4 Homology and
                     Bin/Amphiphysin/Rvs) domain of Formin Binding Protein 17;
                     cd07676"
                     /db_xref="CDD:153360"
     Site            order(10,13,20,23..24,27,30..31,34..35,38,42,45,49,80,83,
                     187,191,217,221,224,227..228,231,235,238,242,246,249..250,
                     253)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153360"
     Site            order(33,44,51..52,56,110,113..114,132,139,143,146,150)
                     /site_type="other"
                     /note="putative membrane interaction site"
                     /db_xref="CDD:153360"
     Region          402..478
                     /region_name="HR1_FBP17"
                     /note="Protein kinase C-related kinase homology region 1
                     (HR1) Rho-binding domain of Formin Binding Protein 17;
                     cd11629"
                     /db_xref="CDD:212019"
     Site            order(414,417,420..421,424..425,427..428,431..432,
                     434..435,453..454,457,460..461,464)
                     /site_type="other"
                     /note="putative Rho binding site 1 [polypeptide binding]"
                     /db_xref="CDD:212019"
     Site            order(422..423,425..426,429..430,432..433,436..437,
                     448..449,451)
                     /site_type="other"
                     /note="putative Rho binding site 2 [polypeptide binding]"
                     /db_xref="CDD:212019"
     Region          548..604
                     /region_name="SH3_FBP17"
                     /note="Src Homology 3 domain of Formin Binding Protein 17;
                     cd12071"
                     /db_xref="CDD:213004"
     Site            order(554,556,559,563,582..583,597,599..600)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:213004"
     CDS             1..616
                     /gene="FNBP1"
                     /coded_by="XM_061154411.1:179..2029"
                     /db_xref="GeneID:133064387"
ORIGIN      
        1 mswgielwdq fdnlekhtqw gidilekyik fvkerteiel syakqlrnls kkyqpkknsk
       61 eeeeyrytac kaflstlnem ndyagqhevi senmtsqiiv elaryvqelk qerkshfhdg
      121 rkaqqhietc wkqlesskrr ferdckeadr aqqyfekmda dinvtkadve karqqaqtrh
      181 qmaeeskady ssvlqkfnhe qheyyhthip sifqkiqeme errivriges vktyaeldrq
      241 vipiigkcld givkaaesid pkndsqlvve ayksgfeppg diefedytqp mkrtvsdnsl
      301 snsrgegkse lkfggkskgk lwpfikknkl vslltsphqp pppppasasp savpngpqsp
      361 kqqkeplshr fnefmtskpk ihcfrslkrg gatpedfsnl ppeqrrkklq qkvdelnkei
      421 qkemdqrdai tkmkdvylkn pqmgdpssld hklaevsqni eklrleaqkf eawlaevegr
      481 lparsdqarr qsgmyetqna psvnncaqdr espdgsytee qsqesevkvl atdfddefdd
      541 eeplpaigtc kalytfegqn egtisvvege tlyvieedkg dgwtrirrne deegyvptsy
      601 vevyldknak gaktyi
//
LOCUS       XP_061010395             613 aa            linear   MAM 02-DEC-2023
DEFINITION  formin-binding protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061010395
VERSION     XP_061010395.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154412.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..613
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..613
                     /product="formin-binding protein 1 isoform X2"
                     /calculated_mol_wt=70674
     Region          6..257
                     /region_name="F-BAR_FBP17"
                     /note="The F-BAR (FES-CIP4 Homology and
                     Bin/Amphiphysin/Rvs) domain of Formin Binding Protein 17;
                     cd07676"
                     /db_xref="CDD:153360"
     Site            order(10,13,20,23..24,27,30..31,34..35,38,42,45,49,80,83,
                     187,191,217,221,224,227..228,231,235,238,242,246,249..250,
                     253)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153360"
     Site            order(33,44,51..52,56,110,113..114,132,139,143,146,150)
                     /site_type="other"
                     /note="putative membrane interaction site"
                     /db_xref="CDD:153360"
     Region          402..478
                     /region_name="HR1_FBP17"
                     /note="Protein kinase C-related kinase homology region 1
                     (HR1) Rho-binding domain of Formin Binding Protein 17;
                     cd11629"
                     /db_xref="CDD:212019"
     Site            order(414,417,420..421,424..425,427..428,431..432,
                     434..435,453..454,457,460..461,464)
                     /site_type="other"
                     /note="putative Rho binding site 1 [polypeptide binding]"
                     /db_xref="CDD:212019"
     Site            order(422..423,425..426,429..430,432..433,436..437,
                     448..449,451)
                     /site_type="other"
                     /note="putative Rho binding site 2 [polypeptide binding]"
                     /db_xref="CDD:212019"
     Region          549..605
                     /region_name="SH3_FBP17"
                     /note="Src Homology 3 domain of Formin Binding Protein 17;
                     cd12071"
                     /db_xref="CDD:213004"
     Site            order(555,557,560,564,583..584,598,600..601)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:213004"
     CDS             1..613
                     /gene="FNBP1"
                     /coded_by="XM_061154412.1:179..2020"
                     /db_xref="GeneID:133064387"
ORIGIN      
        1 mswgielwdq fdnlekhtqw gidilekyik fvkerteiel syakqlrnls kkyqpkknsk
       61 eeeeyrytac kaflstlnem ndyagqhevi senmtsqiiv elaryvqelk qerkshfhdg
      121 rkaqqhietc wkqlesskrr ferdckeadr aqqyfekmda dinvtkadve karqqaqtrh
      181 qmaeeskady ssvlqkfnhe qheyyhthip sifqkiqeme errivriges vktyaeldrq
      241 vipiigkcld givkaaesid pkndsqlvve ayksgfeppg diefedytqp mkrtvsdnsl
      301 snsrgegkse lkfggkskgk lwpfikknkl vslltsphqp pppppasasp savpngpqsp
      361 kqqkeplshr fnefmtskpk ihcfrslkrg gatpedfsnl ppeqrrkklq qkvdelnkei
      421 qkemdqrdai tkmkdvylkn pqmgdpssld hklaevsqni eklrleaqkf eawlaevegr
      481 lparsdqarr qsgmyetqna psvnncaqdr esspdgsyte eqsqesevkv latdfddefd
      541 deeplpaigt ckalytfegq negtisvveg etlyvieedk gdgwtrirrn edeegyvpts
      601 yvevyldkna kdc
//
LOCUS       XP_061010396             607 aa            linear   MAM 02-DEC-2023
DEFINITION  formin-binding protein 1 isoform X3 [Dama dama].
ACCESSION   XP_061010396
VERSION     XP_061010396.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154413.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..607
                     /product="formin-binding protein 1 isoform X3"
                     /calculated_mol_wt=70013
     Region          6..257
                     /region_name="F-BAR_FBP17"
                     /note="The F-BAR (FES-CIP4 Homology and
                     Bin/Amphiphysin/Rvs) domain of Formin Binding Protein 17;
                     cd07676"
                     /db_xref="CDD:153360"
     Site            order(10,13,20,23..24,27,30..31,34..35,38,42,45,49,80,83,
                     187,191,217,221,224,227..228,231,235,238,242,246,249..250,
                     253)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153360"
     Site            order(33,44,51..52,56,110,113..114,132,139,143,146,150)
                     /site_type="other"
                     /note="putative membrane interaction site"
                     /db_xref="CDD:153360"
     Region          392..468
                     /region_name="HR1_FBP17"
                     /note="Protein kinase C-related kinase homology region 1
                     (HR1) Rho-binding domain of Formin Binding Protein 17;
                     cd11629"
                     /db_xref="CDD:212019"
     Site            order(404,407,410..411,414..415,417..418,421..422,
                     424..425,443..444,447,450..451,454)
                     /site_type="other"
                     /note="putative Rho binding site 1 [polypeptide binding]"
                     /db_xref="CDD:212019"
     Site            order(412..413,415..416,419..420,422..423,426..427,
                     438..439,441)
                     /site_type="other"
                     /note="putative Rho binding site 2 [polypeptide binding]"
                     /db_xref="CDD:212019"
     Region          539..595
                     /region_name="SH3_FBP17"
                     /note="Src Homology 3 domain of Formin Binding Protein 17;
                     cd12071"
                     /db_xref="CDD:213004"
     Site            order(545,547,550,554,573..574,588,590..591)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:213004"
     CDS             1..607
                     /gene="FNBP1"
                     /coded_by="XM_061154413.1:179..2002"
                     /db_xref="GeneID:133064387"
ORIGIN      
        1 mswgielwdq fdnlekhtqw gidilekyik fvkerteiel syakqlrnls kkyqpkknsk
       61 eeeeyrytac kaflstlnem ndyagqhevi senmtsqiiv elaryvqelk qerkshfhdg
      121 rkaqqhietc wkqlesskrr ferdckeadr aqqyfekmda dinvtkadve karqqaqtrh
      181 qmaeeskady ssvlqkfnhe qheyyhthip sifqkiqeme errivriges vktyaeldrq
      241 vipiigkcld givkaaesid pkndsqlvve ayksgfeppg diefedytqp mkrtvsdnsl
      301 snsrgegkse lkfggkskgk lwpfikknkp pppppasasp savpngpqsp kqqkeplshr
      361 fnefmtskpk ihcfrslkrg gatpedfsnl ppeqrrkklq qkvdelnkei qkemdqrdai
      421 tkmkdvylkn pqmgdpssld hklaevsqni eklrleaqkf eawlaevegr lparsdqarr
      481 qsgmyetqna psvnncaqdr esspdgsyte eqsqesevkv latdfddefd deeplpaigt
      541 ckalytfegq negtisvveg etlyvieedk gdgwtrirrn edeegyvpts yvevyldkna
      601 kgaktyi
//
LOCUS       XP_061010397             606 aa            linear   MAM 02-DEC-2023
DEFINITION  formin-binding protein 1 isoform X4 [Dama dama].
ACCESSION   XP_061010397
VERSION     XP_061010397.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154414.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..606
                     /product="formin-binding protein 1 isoform X4"
                     /calculated_mol_wt=69926
     Region          6..257
                     /region_name="F-BAR_FBP17"
                     /note="The F-BAR (FES-CIP4 Homology and
                     Bin/Amphiphysin/Rvs) domain of Formin Binding Protein 17;
                     cd07676"
                     /db_xref="CDD:153360"
     Site            order(10,13,20,23..24,27,30..31,34..35,38,42,45,49,80,83,
                     187,191,217,221,224,227..228,231,235,238,242,246,249..250,
                     253)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153360"
     Site            order(33,44,51..52,56,110,113..114,132,139,143,146,150)
                     /site_type="other"
                     /note="putative membrane interaction site"
                     /db_xref="CDD:153360"
     Region          392..468
                     /region_name="HR1_FBP17"
                     /note="Protein kinase C-related kinase homology region 1
                     (HR1) Rho-binding domain of Formin Binding Protein 17;
                     cd11629"
                     /db_xref="CDD:212019"
     Site            order(404,407,410..411,414..415,417..418,421..422,
                     424..425,443..444,447,450..451,454)
                     /site_type="other"
                     /note="putative Rho binding site 1 [polypeptide binding]"
                     /db_xref="CDD:212019"
     Site            order(412..413,415..416,419..420,422..423,426..427,
                     438..439,441)
                     /site_type="other"
                     /note="putative Rho binding site 2 [polypeptide binding]"
                     /db_xref="CDD:212019"
     Region          538..594
                     /region_name="SH3_FBP17"
                     /note="Src Homology 3 domain of Formin Binding Protein 17;
                     cd12071"
                     /db_xref="CDD:213004"
     Site            order(544,546,549,553,572..573,587,589..590)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:213004"
     CDS             1..606
                     /gene="FNBP1"
                     /coded_by="XM_061154414.1:179..1999"
                     /db_xref="GeneID:133064387"
ORIGIN      
        1 mswgielwdq fdnlekhtqw gidilekyik fvkerteiel syakqlrnls kkyqpkknsk
       61 eeeeyrytac kaflstlnem ndyagqhevi senmtsqiiv elaryvqelk qerkshfhdg
      121 rkaqqhietc wkqlesskrr ferdckeadr aqqyfekmda dinvtkadve karqqaqtrh
      181 qmaeeskady ssvlqkfnhe qheyyhthip sifqkiqeme errivriges vktyaeldrq
      241 vipiigkcld givkaaesid pkndsqlvve ayksgfeppg diefedytqp mkrtvsdnsl
      301 snsrgegkse lkfggkskgk lwpfikknkp pppppasasp savpngpqsp kqqkeplshr
      361 fnefmtskpk ihcfrslkrg gatpedfsnl ppeqrrkklq qkvdelnkei qkemdqrdai
      421 tkmkdvylkn pqmgdpssld hklaevsqni eklrleaqkf eawlaevegr lparsdqarr
      481 qsgmyetqna psvnncaqdr espdgsytee qsqesevkvl atdfddefdd eeplpaigtc
      541 kalytfegqn egtisvvege tlyvieedkg dgwtrirrne deegyvptsy vevyldknak
      601 gaktyi
//
LOCUS       XP_061010398             556 aa            linear   MAM 02-DEC-2023
DEFINITION  formin-binding protein 1 isoform X5 [Dama dama].
ACCESSION   XP_061010398
VERSION     XP_061010398.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154415.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..556
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..556
                     /product="formin-binding protein 1 isoform X5"
                     /calculated_mol_wt=64441
     Region          6..257
                     /region_name="F-BAR_FBP17"
                     /note="The F-BAR (FES-CIP4 Homology and
                     Bin/Amphiphysin/Rvs) domain of Formin Binding Protein 17;
                     cd07676"
                     /db_xref="CDD:153360"
     Site            order(10,13,20,23..24,27,30..31,34..35,38,42,45,49,80,83,
                     187,191,217,221,224,227..228,231,235,238,242,246,249..250,
                     253)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153360"
     Site            order(33,44,51..52,56,110,113..114,132,139,143,146,150)
                     /site_type="other"
                     /note="putative membrane interaction site"
                     /db_xref="CDD:153360"
     Region          341..417
                     /region_name="HR1_FBP17"
                     /note="Protein kinase C-related kinase homology region 1
                     (HR1) Rho-binding domain of Formin Binding Protein 17;
                     cd11629"
                     /db_xref="CDD:212019"
     Site            order(353,356,359..360,363..364,366..367,370..371,
                     373..374,392..393,396,399..400,403)
                     /site_type="other"
                     /note="putative Rho binding site 1 [polypeptide binding]"
                     /db_xref="CDD:212019"
     Site            order(361..362,364..365,368..369,371..372,375..376,
                     387..388,390)
                     /site_type="other"
                     /note="putative Rho binding site 2 [polypeptide binding]"
                     /db_xref="CDD:212019"
     Region          488..544
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
     Site            order(494,496,499,503,522..523,537,539..540)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:213004"
     CDS             1..556
                     /gene="FNBP1"
                     /coded_by="XM_061154415.1:179..1849"
                     /db_xref="GeneID:133064387"
ORIGIN      
        1 mswgielwdq fdnlekhtqw gidilekyik fvkerteiel syakqlrnls kkyqpkknsk
       61 eeeeyrytac kaflstlnem ndyagqhevi senmtsqiiv elaryvqelk qerkshfhdg
      121 rkaqqhietc wkqlesskrr ferdckeadr aqqyfekmda dinvtkadve karqqaqtrh
      181 qmaeeskady ssvlqkfnhe qheyyhthip sifqkiqeme errivriges vktyaeldrq
      241 vipiigkcld givkaaesid pkndsqlvve ayksgfeppg diefedytqp mkrtvsdnsl
      301 snsrgegkse lkfggkskgk lwpfikknkg atpedfsnlp peqrrkklqq kvdelnkeiq
      361 kemdqrdait kmkdvylknp qmgdpssldh klaevsqnie klrleaqkfe awlaevegrl
      421 parsdqarrq sgmyetqnap svnncaqdre sspdgsytee qsqesevkvl atdfddefdd
      481 eeplpaigtc kalytfegqn egtisvvege tlyvieedkg dgwtrirrne deegyvptsy
      541 vevyldknak gaktyi
//
LOCUS       XP_061010399             555 aa            linear   MAM 02-DEC-2023
DEFINITION  formin-binding protein 1 isoform X6 [Dama dama].
ACCESSION   XP_061010399
VERSION     XP_061010399.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154416.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..555
                     /product="formin-binding protein 1 isoform X6"
                     /calculated_mol_wt=64354
     Region          6..257
                     /region_name="F-BAR_FBP17"
                     /note="The F-BAR (FES-CIP4 Homology and
                     Bin/Amphiphysin/Rvs) domain of Formin Binding Protein 17;
                     cd07676"
                     /db_xref="CDD:153360"
     Site            order(10,13,20,23..24,27,30..31,34..35,38,42,45,49,80,83,
                     187,191,217,221,224,227..228,231,235,238,242,246,249..250,
                     253)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153360"
     Site            order(33,44,51..52,56,110,113..114,132,139,143,146,150)
                     /site_type="other"
                     /note="putative membrane interaction site"
                     /db_xref="CDD:153360"
     Region          341..417
                     /region_name="HR1_FBP17"
                     /note="Protein kinase C-related kinase homology region 1
                     (HR1) Rho-binding domain of Formin Binding Protein 17;
                     cd11629"
                     /db_xref="CDD:212019"
     Site            order(353,356,359..360,363..364,366..367,370..371,
                     373..374,392..393,396,399..400,403)
                     /site_type="other"
                     /note="putative Rho binding site 1 [polypeptide binding]"
                     /db_xref="CDD:212019"
     Site            order(361..362,364..365,368..369,371..372,375..376,
                     387..388,390)
                     /site_type="other"
                     /note="putative Rho binding site 2 [polypeptide binding]"
                     /db_xref="CDD:212019"
     Region          487..543
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
     Site            order(493,495,498,502,521..522,536,538..539)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:213004"
     CDS             1..555
                     /gene="FNBP1"
                     /coded_by="XM_061154416.1:179..1846"
                     /db_xref="GeneID:133064387"
ORIGIN      
        1 mswgielwdq fdnlekhtqw gidilekyik fvkerteiel syakqlrnls kkyqpkknsk
       61 eeeeyrytac kaflstlnem ndyagqhevi senmtsqiiv elaryvqelk qerkshfhdg
      121 rkaqqhietc wkqlesskrr ferdckeadr aqqyfekmda dinvtkadve karqqaqtrh
      181 qmaeeskady ssvlqkfnhe qheyyhthip sifqkiqeme errivriges vktyaeldrq
      241 vipiigkcld givkaaesid pkndsqlvve ayksgfeppg diefedytqp mkrtvsdnsl
      301 snsrgegkse lkfggkskgk lwpfikknkg atpedfsnlp peqrrkklqq kvdelnkeiq
      361 kemdqrdait kmkdvylknp qmgdpssldh klaevsqnie klrleaqkfe awlaevegrl
      421 parsdqarrq sgmyetqnap svnncaqdre spdgsyteeq sqesevkvla tdfddefdde
      481 eplpaigtck alytfegqne gtisvveget lyvieedkgd gwtrirrned eegyvptsyv
      541 evyldknakg aktyi
//
LOCUS       XP_061010400             913 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin carboxyl-terminal hydrolase 20 [Dama dama].
ACCESSION   XP_061010400
VERSION     XP_061010400.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154417.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..913
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..913
                     /product="ubiquitin carboxyl-terminal hydrolase 20"
                     /calculated_mol_wt=101947
     Region          30..90
                     /region_name="zf-UBP"
                     /note="Zn-finger in ubiquitin-hydrolases and other
                     protein; pfam02148"
                     /db_xref="CDD:460464"
     Region          145..681
                     /region_name="UCH"
                     /note="Ubiquitin carboxyl-terminal hydrolase; pfam00443"
                     /db_xref="CDD:425685"
     Region          701..784
                     /region_name="DUSP"
                     /note="Domain in ubiquitin-specific proteases; smart00695"
                     /db_xref="CDD:197831"
     Region          809..893
                     /region_name="DUSP"
                     /note="Domain in ubiquitin-specific proteases; smart00695"
                     /db_xref="CDD:197831"
     CDS             1..913
                     /gene="USP20"
                     /coded_by="XM_061154417.1:230..2971"
                     /db_xref="GeneID:133064388"
ORIGIN      
        1 mgdsrdlcph ldsigevtke dlllkskstc qscgvsgpnl waclqvscsy vgcgesfadh
       61 stlhaqakkh nltvnlttfr vwcyacekev fleprlaahp pspvpkfseq dspppshplk
      121 avpiavadeg esesedddlk prgltgmknl gnscymnaal qalsncpplt qfflecgglv
      181 rtdkkpalcr syqklvsevw hrkrpsyvvp tslshgiklv npmfrgyaqq dtqeflrclm
      241 dqlheelkep vvataaalte ardsdssdtd ekregdrsps edeflscdss sdrgegdgqg
      301 rsgggpraea ellmadeagr aisekermkd rkfswgqqrt nseqvdedad vdtamaaleq
      361 qppeteqpsp rstspcrtpe pdneahmrst srpcspvhhh eghaklassp hraspvrmgp
      421 ayvlkkaqvp gsrrrkeqsy rsvisdifdg svlslvqclt cdrvsttvet fqdlslpipg
      481 kedlaklhsa iyqnvpaksg acgdsyaaqg wlafiveyir rfvvsctpsw fwgpvvtled
      541 claaffaade lkgdnmysce rckklrngvk yckvlrlpei lcihlkrfrh evmysfkiss
      601 hvsfplegld lrpflakect sqittydlls vichhgtags ghyiaycqnv ingqwyefdd
      661 qyvtevhetv vqnaeayvlf yrksseeavr erqqvvslaa mrepsllrfy vsrewlnkfn
      721 tfaepgpitn htflcshggi ppnkyhyidd lvvilpqnvw ehlynrfggg pavnhlyvcs
      781 icqveieala krrrveidtf iklnkafqae espsviycis mqwfreweaf vkgkdneppg
      841 pidnsriaqv kgsghvqlkq gadygqisee twvylnnlyg ggpeiairqs vaqlpdpesl
      901 hgeqkieaet ral
//
LOCUS       XP_061010401             333 aa            linear   MAM 02-DEC-2023
DEFINITION  torsin-1A [Dama dama].
ACCESSION   XP_061010401
VERSION     XP_061010401.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154418.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..333
                     /product="torsin-1A"
                     /calculated_mol_wt=37693
     Region          53..170
                     /region_name="Torsin"
                     /note="pfam06309"
                     /db_xref="CDD:399367"
     CDS             1..333
                     /gene="TOR1A"
                     /coded_by="XM_061154418.1:70..1071"
                     /db_xref="GeneID:133064389"
ORIGIN      
        1 mklgraalgl lllaplavra vepislglal agvltgyisy prlyclfaec cspkrslsre
       61 alqkdldskl fgqhlakkvi lnavsgfisn pkpkkpltls lhgwtgtgkn fvskiiaeni
      121 yegglnsdyv hlfvatlhfp hisnitlykd qlqswirgnv sacarsifif demdkmhagl
      181 idaikpyldy ydnldgvsyq kaififlsna gaeritdval dfwrsgkqre eiklkdmeha
      241 lsvsafnnkn sgfwhsslid rnlidyfvpf lpleykhlkm cirvemqsrg yrvdedivsr
      301 vaeemtffpk eervfsdkgc ktvftkldyy ydd
//
LOCUS       XP_061010403             289 aa            linear   MAM 02-DEC-2023
DEFINITION  splicing factor C9orf78 homolog [Dama dama].
ACCESSION   XP_061010403
VERSION     XP_061010403.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154420.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..289
                     /product="splicing factor C9orf78 homolog"
                     /calculated_mol_wt=33462
     Region          101..196
                     /region_name="Hep_59"
                     /note="Hepatocellular carcinoma-associated antigen 59;
                     pfam07052"
                     /db_xref="CDD:462074"
     CDS             1..289
                     /gene="C11H9orf78"
                     /coded_by="XM_061154420.1:76..945"
                     /db_xref="GeneID:133064390"
ORIGIN      
        1 mpvtgktfrr rradseseed eqdseevrlk leetrevqnl rkrpngvsav allvgekvqe
       61 ettlvddpfq mktggmvdmk klkergkdki seeedlhlgt sfsaetnrrd edadmmkyie
      121 telkkrkgiv eheeqkvkpk naedclyelp enirvssakk teemlsnqml sgipevdlgi
      181 dakikniist edakarllae qqnkkkdset sfvptnmavn yvqhnrfyhe elnapirrnk
      241 eepkarplrv gdtekpeper sppnrkrpan ekatddyhye kfkkmnrry
//
LOCUS       XP_061010404             336 aa            linear   MAM 02-DEC-2023
DEFINITION  torsin-1B [Dama dama].
ACCESSION   XP_061010404
VERSION     XP_061010404.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154421.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..336
                     /product="torsin-1B"
                     /calculated_mol_wt=37732
     Region          55..176
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            order(114..116,137,139..140,177..178)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:410865"
     Region          <172..239
                     /region_name="ClpA"
                     /note="ATP-dependent Clp protease, ATP-binding subunit
                     ClpA [Posttranslational modification, protein turnover,
                     chaperones]; COG0542"
                     /db_xref="CDD:440308"
     CDS             1..336
                     /gene="TOR1B"
                     /coded_by="XM_061154421.1:74..1084"
                     /db_xref="GeneID:133064391"
ORIGIN      
        1 mrldprlgga aalrlllaah vvaafepitv giaigaasal tgylsykdly crfaeccrse
       61 rplnasalkq dleeklfgqh latevilkal tgfknnknpk kpltlslhgw agtgknfvsq
      121 ivaenlhpkg lksnfvhlfv stlhfpheqh iklyqdqlqr wirgnvsaca gsvfifdemd
      181 klhpgvidai kpfldyyeqi dgvsyrkaif iflsnaggdl itktaldfwr agrkrediql
      241 kdleavlsvg vfnnkhsglw hsglidrnli dyfipflple yrhvkmcvra emkargsaid
      301 edvvtrvaee mtffpkdeki ysdkgcktvq srldfy
//
LOCUS       XP_061010405             153 aa            linear   MAM 02-DEC-2023
DEFINITION  prostaglandin E synthase [Dama dama].
ACCESSION   XP_061010405
VERSION     XP_061010405.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154422.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..153
                     /product="prostaglandin E synthase"
                     /calculated_mol_wt=17180
     Region          17..147
                     /region_name="MAPEG"
                     /note="MAPEG family; pfam01124"
                     /db_xref="CDD:460074"
     CDS             1..153
                     /gene="PTGES"
                     /coded_by="XM_061154422.1:177..638"
                     /db_xref="GeneID:133064392"
ORIGIN      
        1 mppsglelmn gqvlpafllc sallvikmyv vaiitgqvrl rkkafanped aqrhgglqyc
       61 rndpdvercl rahrndmeti ypflflgfvy sflgpnpfva rmhflvfflg rmvhtvaylg
      121 klraptrsla ytlaqlpcas malqivweaa rhl
//
LOCUS       XP_061010406             254 aa            linear   MAM 02-DEC-2023
DEFINITION  paired mesoderm homeobox protein 2 [Dama dama].
ACCESSION   XP_061010406
VERSION     XP_061010406.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154423.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..254
                     /product="paired mesoderm homeobox protein 2"
                     /calculated_mol_wt=27156
     Region          110..162
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          <116..220
                     /region_name="COG5576"
                     /note="Homeodomain-containing transcription factor
                     [Transcription]"
                     /db_xref="CDD:227863"
     Region          228..244
                     /region_name="OAR"
                     /note="OAR motif; pfam03826"
                     /db_xref="CDD:461067"
     CDS             1..254
                     /gene="PRRX2"
                     /coded_by="XM_061154423.1:1..765"
                     /db_xref="GeneID:133064393"
ORIGIN      
        1 mdsaagpafa pdkpalgpgp pppppalgpg dcaqarknft vshlldleev aaagrlaarp
       61 apraearegt arepsggssg seaapqdgec pspgrssaak rkkkqrrnrt tfnssqlqal
      121 ervferthyp dafvreelar rvnlsearvq vwfqnrrakf rrneramlan rsasllksys
      181 qeaaieqpva prpttlspdy lswtasspys tvppyspggs gpatpgvnma nsiaslrlka
      241 kefslhhsqv ptvn
//
LOCUS       XP_061010407             421 aa            linear   MAM 02-DEC-2023
DEFINITION  ankyrin repeat and SOCS box protein 6 isoform X1 [Dama dama].
ACCESSION   XP_061010407
VERSION     XP_061010407.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154424.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..421
                     /product="ankyrin repeat and SOCS box protein 6 isoform
                     X1"
                     /calculated_mol_wt=46651
     Region          17..>212
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          72..99
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          105..133
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(108..109,112..114,116..117,121,124,133,136,138,
                     142..143,146..147,149,151..152,156,159,168,170,172,
                     177..178,181..183,185..186,195,198)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          136..168
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          170..205
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          209..254
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          370..413
                     /region_name="SOCS_ASB6"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     ASB6-like proteins. ASB family members have a C-terminal
                     SOCS box and an N-terminal ankyrin-related sequence. ASB6
                     interacts with the adaptor protein APS and recruits
                     elongin B/C to the insulin receptor...; cd03725"
                     /db_xref="CDD:239695"
     Site            order(371..376,382,393,399,404)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239695"
     CDS             1..421
                     /gene="ASB6"
                     /coded_by="XM_061154424.1:155..1420"
                     /db_xref="GeneID:133064394"
ORIGIN      
        1 mpflhgfrri ifeyqplvda ilgslgiqdp erqepldgps yaaseesril vltellerka
       61 qspfyqegvs nallkmaelg laraaavllr nganlnfedp vtyytalhia vlrnqpdmve
      121 llvrhgadvn rrdrihessp ldlaseeper lpclqrlldl gadvnaadkh gktallhala
      181 ssdgvqihnt enirlllegg advkattkdg dtvftciifl lgetvggdke eaqlinrfcf
      241 qvtqlllahg adpsecpahe slthiclksf klhfpllrfl lesgaayncs lhgascwsgf
      301 hiiferlcsh pgcaedesha dllrkaetvl dlmvtnsqkl qlpenfdihp vgsladkiqa
      361 lhvslrqles yppplkhlcr vcirlylqpw pvdakvkalp lpdrlkwyll sehsgavedd
      421 i
//
LOCUS       XP_061010408             346 aa            linear   MAM 02-DEC-2023
DEFINITION  ankyrin repeat and SOCS box protein 6 isoform X2 [Dama dama].
ACCESSION   XP_061010408
VERSION     XP_061010408.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154425.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..346
                     /product="ankyrin repeat and SOCS box protein 6 isoform
                     X2"
                     /calculated_mol_wt=38179
     Region          <2..>137
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          30..58
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(33..34,37..39,41..42,46,49,58,61,63,67..68,71..72,
                     74,76..77,81,84,93,95,97,102..103,106..108,110..111,120,
                     123)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          61..93
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          95..130
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          134..179
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          295..338
                     /region_name="SOCS_ASB6"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     ASB6-like proteins. ASB family members have a C-terminal
                     SOCS box and an N-terminal ankyrin-related sequence. ASB6
                     interacts with the adaptor protein APS and recruits
                     elongin B/C to the insulin receptor...; cd03725"
                     /db_xref="CDD:239695"
     Site            order(296..301,307,318,324,329)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239695"
     CDS             1..346
                     /gene="ASB6"
                     /coded_by="XM_061154425.1:395..1435"
                     /db_xref="GeneID:133064394"
ORIGIN      
        1 maelglaraa avllrnganl nfedpvtyyt alhiavlrnq pdmvellvrh gadvnrrdri
       61 hesspldlas eeperlpclq rlldlgadvn aadkhgktal lhalassdgv qihntenirl
      121 lleggadvka ttkdgdtvft ciifllgetv ggdkeeaqli nrfcfqvtql llahgadpse
      181 cpaheslthi clksfklhfp llrfllesga ayncslhgas cwsgfhiife rlcshpgcae
      241 deshadllrk aetvldlmvt nsqklqlpen fdihpvgsla dkiqalhvsl rqlesypppl
      301 khlcrvcirl ylqpwpvdak vkalplpdrl kwyllsehsg aveddi
//
LOCUS       XP_061010409             251 aa            linear   MAM 02-DEC-2023
DEFINITION  N-terminal Xaa-Pro-Lys N-methyltransferase 1 isoform X1 [Dama
            dama].
ACCESSION   XP_061010409
VERSION     XP_061010409.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154426.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..251
                     /product="N-terminal Xaa-Pro-Lys N-methyltransferase 1
                     isoform X1"
                     /calculated_mol_wt=28045
     Region          36..251
                     /region_name="Methyltransf_PK"
                     /note="AdoMet dependent proline di-methyltransferase;
                     pfam05891"
                     /db_xref="CDD:461771"
     CDS             1..251
                     /gene="NTMT1"
                     /coded_by="XM_061154426.1:2170..2925"
                     /db_xref="GeneID:133064395"
ORIGIN      
        1 mqesggtalr geplplslvp eqrraaesmt seviedekqf yskaktywke vpatvdgmlg
       61 gyghissidi nssrkflqrf lregpnktgt syaldcgagi gritkrlllp lfgvvdmvdv
      121 tedflvkakt ylgeegkrvr nffccglqdf spepqsydvi wiqwvighlt dqhlaeflrr
      181 ckrglrpngi ivikdnmaqe gvilddvdss vcrdldvvhs ivhsaglsll aqerqenlpd
      241 eiyhvyslal r
//
LOCUS       XP_061010410             243 aa            linear   MAM 02-DEC-2023
DEFINITION  N-terminal Xaa-Pro-Lys N-methyltransferase 1 isoform X2 [Dama
            dama].
ACCESSION   XP_061010410
VERSION     XP_061010410.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154427.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..243
                     /product="N-terminal Xaa-Pro-Lys N-methyltransferase 1
                     isoform X2"
                     /calculated_mol_wt=27288
     Region          28..243
                     /region_name="Methyltransf_PK"
                     /note="AdoMet dependent proline di-methyltransferase;
                     pfam05891"
                     /db_xref="CDD:461771"
     CDS             1..243
                     /gene="NTMT1"
                     /coded_by="XM_061154427.1:133..864"
                     /db_xref="GeneID:133064395"
ORIGIN      
        1 mvteplplsl vpeqrraaes mtseviedek qfyskaktyw kevpatvdgm lggyghissi
       61 dinssrkflq rflregpnkt gtsyaldcga gigritkrll lplfgvvdmv dvtedflvka
      121 ktylgeegkr vrnffccglq dfspepqsyd viwiqwvigh ltdqhlaefl rrckrglrpn
      181 giivikdnma qegvilddvd ssvcrdldvv hsivhsagls llaqerqenl pdeiyhvysl
      241 alr
//
LOCUS       XP_061010411             223 aa            linear   MAM 02-DEC-2023
DEFINITION  N-terminal Xaa-Pro-Lys N-methyltransferase 1 isoform X3 [Dama
            dama].
ACCESSION   XP_061010411
VERSION     XP_061010411.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154428.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..223
                     /product="N-terminal Xaa-Pro-Lys N-methyltransferase 1
                     isoform X3"
                     /calculated_mol_wt=25083
     Region          8..223
                     /region_name="Methyltransf_PK"
                     /note="AdoMet dependent proline di-methyltransferase;
                     pfam05891"
                     /db_xref="CDD:461771"
     CDS             1..223
                     /gene="NTMT1"
                     /coded_by="XM_061154428.1:237..908"
                     /db_xref="GeneID:133064395"
ORIGIN      
        1 mtseviedek qfyskaktyw kevpatvdgm lggyghissi dinssrkflq rflregpnkt
       61 gtsyaldcga gigritkrll lplfgvvdmv dvtedflvka ktylgeegkr vrnffccglq
      121 dfspepqsyd viwiqwvigh ltdqhlaefl rrckrglrpn giivikdnma qegvilddvd
      181 ssvcrdldvv hsivhsagls llaqerqenl pdeiyhvysl alr
//
LOCUS       XP_061010412             135 aa            linear   MAM 02-DEC-2023
DEFINITION  N-terminal Xaa-Pro-Lys N-methyltransferase 1 isoform X4 [Dama
            dama].
ACCESSION   XP_061010412
VERSION     XP_061010412.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154429.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..135
                     /product="N-terminal Xaa-Pro-Lys N-methyltransferase 1
                     isoform X4"
                     /calculated_mol_wt=15327
     Region          <1..135
                     /region_name="Methyltransf_PK"
                     /note="AdoMet dependent proline di-methyltransferase;
                     pfam05891"
                     /db_xref="CDD:461771"
     CDS             1..135
                     /gene="NTMT1"
                     /coded_by="XM_061154429.1:242..649"
                     /db_xref="GeneID:133064395"
ORIGIN      
        1 mvdvtedflv kaktylgeeg krvrnffccg lqdfspepqs ydviwiqwvi ghltdqhlae
       61 flrrckrglr pngiivikdn maqegvildd vdssvcrdld vvhsivhsag lsllaqerqe
      121 nlpdeiyhvy slalr
//
LOCUS       XP_061010414             324 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein phosphatase 2A activator [Dama dama].
ACCESSION   XP_061010414
VERSION     XP_061010414.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154431.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..324
                     /product="serine/threonine-protein phosphatase 2A
                     activator"
                     /calculated_mol_wt=36744
     Region          26..317
                     /region_name="PTPA"
                     /note="Phosphotyrosyl phosphate activator (PTPA) protein;
                     pfam03095"
                     /db_xref="CDD:460802"
     Site            order(94,102,148,200..201,203,206..207,209,215,263,
                     265..266,270,307)
                     /site_type="other"
                     /note="peptide-induced dimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:239754"
     Site            order(148,150,152..155,203..204,213..215,217,278,281,287,
                     291,294,298,302,304..305,307..308)
                     /site_type="active"
                     /note="putative interaction site [active]"
                     /db_xref="CDD:239754"
     Site            order(148,150,152..155,204..206,304..305,307..308)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:239754"
     Site            order(209..210,273..274,277..278,281,290..291,301..304)
                     /site_type="active"
                     /note="peptide binding pocket [active]"
                     /db_xref="CDD:239754"
     Site            order(209,270,281,290,294,302)
                     /site_type="other"
                     /note="putative PP2A binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:239754"
     CDS             1..324
                     /gene="PTPA"
                     /coded_by="XM_061154431.1:286..1260"
                     /db_xref="GeneID:133064399"
ORIGIN      
        1 maegerqtps dssedapptt qnfiipkkei htvpdmgkwk rsqayadyig filtlnegvk
       61 gkklsfeykv seaieklval lntldrwide tppvdqpsrf gnkayrtwya kldqeaenlv
      121 atvvpthlaa avpevavylk esvgnstrid ygtgheaafa aflcclckig vlrvddqiai
      181 vfkvfnryle vmrklqktyr mepagsqgvw glddfqflpf iwgssqlidh pyleprhfvd
      241 ekavnenhkd ymflecilfi temktgpfae hsnqlwnisa vpswskvnqg lirmykaecl
      301 ekfpviqhfk fgsllpihpv tssc
//
LOCUS       XP_061010415             642 aa            linear   MAM 02-DEC-2023
DEFINITION  carnitine O-acetyltransferase isoform X1 [Dama dama].
ACCESSION   XP_061010415
VERSION     XP_061010415.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154432.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..642
                     /product="carnitine O-acetyltransferase isoform X1"
                     /calculated_mol_wt=72647
     Region          38..625
                     /region_name="Carn_acyltransf"
                     /note="Choline/Carnitine o-acyltransferase; pfam00755"
                     /db_xref="CDD:459926"
     CDS             1..642
                     /gene="CRAT"
                     /coded_by="XM_061154432.1:256..2184"
                     /db_xref="GeneID:133064400"
ORIGIN      
        1 meneqqkekv kplgllkpss lmkvssrfka hqdslprlpv pplqqtldhy lkalqpivse
       61 eewtqtkqlv eefqvaggvg erlqkglerr arkmenwgpm assfprgvpk rsvlsdwwlk
      121 taylqyrqpl viysspgvml pkqdfvdrqg qlrfaaklie gvldfktmid netlpveylg
      181 gkplcmnqyy qilsscrvpg pkqdlvtkfs rtkkppmhit vvhnyqffel dvyhsdgtpl
      241 tsdqiftqle kiwnsslqtn kepvgiltsn hrnswakays tlikdkvnre svlsiqrsif
      301 tvcldapmpr vsedtyrsqv agqmlhgggs klnsgnrwfd ktlqfivaed gacglvyeha
      361 aaegppivsl ldhvmeftkk pelvrspmvp lpmpkklrfn itpeiksdie kakqnlsimi
      421 qdlditvmvf hhfgkdfpks eklspdafiq malqlayyri ygqacatyes aslrmfhlgr
      481 tdtirsasva sltfvkamdd pnvtehekve llrkavqahr aytdrairge afdrhllglk
      541 mqaiedlvsm pdifmdtsya iamhfnlsts qvpaktdcvm ffgpvvpdgy gvcynpmeth
      601 infsvsayns cadtnavhla hylekalldm rallqshpra kl
//
LOCUS       XP_061010416             642 aa            linear   MAM 02-DEC-2023
DEFINITION  carnitine O-acetyltransferase isoform X2 [Dama dama].
ACCESSION   XP_061010416
VERSION     XP_061010416.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154433.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..642
                     /product="carnitine O-acetyltransferase isoform X2"
                     /calculated_mol_wt=72493
     Region          38..625
                     /region_name="Carn_acyltransf"
                     /note="Choline/Carnitine o-acyltransferase; pfam00755"
                     /db_xref="CDD:459926"
     CDS             1..642
                     /gene="CRAT"
                     /coded_by="XM_061154433.1:145..2073"
                     /db_xref="GeneID:133064400"
ORIGIN      
        1 mlafatrtvv kplgllkpss lmkvssrfka hqdslprlpv pplqqtldhy lkalqpivse
       61 eewtqtkqlv eefqvaggvg erlqkglerr arkmenwgpm assfprgvpk rsvlsdwwlk
      121 taylqyrqpl viysspgvml pkqdfvdrqg qlrfaaklie gvldfktmid netlpveylg
      181 gkplcmnqyy qilsscrvpg pkqdlvtkfs rtkkppmhit vvhnyqffel dvyhsdgtpl
      241 tsdqiftqle kiwnsslqtn kepvgiltsn hrnswakays tlikdkvnre svlsiqrsif
      301 tvcldapmpr vsedtyrsqv agqmlhgggs klnsgnrwfd ktlqfivaed gacglvyeha
      361 aaegppivsl ldhvmeftkk pelvrspmvp lpmpkklrfn itpeiksdie kakqnlsimi
      421 qdlditvmvf hhfgkdfpks eklspdafiq malqlayyri ygqacatyes aslrmfhlgr
      481 tdtirsasva sltfvkamdd pnvtehekve llrkavqahr aytdrairge afdrhllglk
      541 mqaiedlvsm pdifmdtsya iamhfnlsts qvpaktdcvm ffgpvvpdgy gvcynpmeth
      601 infsvsayns cadtnavhla hylekalldm rallqshpra kl
//
LOCUS       XP_061010417             626 aa            linear   MAM 02-DEC-2023
DEFINITION  carnitine O-acetyltransferase isoform X3 [Dama dama].
ACCESSION   XP_061010417
VERSION     XP_061010417.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154434.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..626
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..626
                     /product="carnitine O-acetyltransferase isoform X3"
                     /calculated_mol_wt=70992
     Region          38..609
                     /region_name="Carn_acyltransf"
                     /note="Choline/Carnitine o-acyltransferase; pfam00755"
                     /db_xref="CDD:459926"
     CDS             1..626
                     /gene="CRAT"
                     /coded_by="XM_061154434.1:251..2131"
                     /db_xref="GeneID:133064400"
ORIGIN      
        1 meneqqkekv kplgllkpss lmkvssrfka hqdslprlpv pplqqtldhy lkalqpivse
       61 eewtqtkqlv eefqvaggvg erlqkglerr arkmenwlsd wwlktaylqy rqplviyssp
      121 gvmlpkqdfv drqgqlrfaa kliegvldfk tmidnetlpv eylggkplcm nqyyqilssc
      181 rvpgpkqdlv tkfsrtkkpp mhitvvhnyq ffeldvyhsd gtpltsdqif tqlekiwnss
      241 lqtnkepvgi ltsnhrnswa kaystlikdk vnresvlsiq rsiftvclda pmprvsedty
      301 rsqvagqmlh gggsklnsgn rwfdktlqfi vaedgacglv yehaaaegpp ivslldhvme
      361 ftkkpelvrs pmvplpmpkk lrfnitpeik sdiekakqnl simiqdldit vmvfhhfgkd
      421 fpkseklspd afiqmalqla yyriygqaca tyesaslrmf hlgrtdtirs asvasltfvk
      481 amddpnvteh ekvellrkav qahraytdra irgeafdrhl lglkmqaied lvsmpdifmd
      541 tsyaiamhfn lstsqvpakt dcvmffgpvv pdgygvcynp methinfsvs aynscadtna
      601 vhlahyleka lldmrallqs hprakl
//
LOCUS       XP_061010418             626 aa            linear   MAM 02-DEC-2023
DEFINITION  carnitine O-acetyltransferase isoform X4 [Dama dama].
ACCESSION   XP_061010418
VERSION     XP_061010418.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154435.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..626
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..626
                     /product="carnitine O-acetyltransferase isoform X4"
                     /calculated_mol_wt=70838
     Region          38..609
                     /region_name="Carn_acyltransf"
                     /note="Choline/Carnitine o-acyltransferase; pfam00755"
                     /db_xref="CDD:459926"
     CDS             1..626
                     /gene="CRAT"
                     /coded_by="XM_061154435.1:145..2025"
                     /db_xref="GeneID:133064400"
ORIGIN      
        1 mlafatrtvv kplgllkpss lmkvssrfka hqdslprlpv pplqqtldhy lkalqpivse
       61 eewtqtkqlv eefqvaggvg erlqkglerr arkmenwlsd wwlktaylqy rqplviyssp
      121 gvmlpkqdfv drqgqlrfaa kliegvldfk tmidnetlpv eylggkplcm nqyyqilssc
      181 rvpgpkqdlv tkfsrtkkpp mhitvvhnyq ffeldvyhsd gtpltsdqif tqlekiwnss
      241 lqtnkepvgi ltsnhrnswa kaystlikdk vnresvlsiq rsiftvclda pmprvsedty
      301 rsqvagqmlh gggsklnsgn rwfdktlqfi vaedgacglv yehaaaegpp ivslldhvme
      361 ftkkpelvrs pmvplpmpkk lrfnitpeik sdiekakqnl simiqdldit vmvfhhfgkd
      421 fpkseklspd afiqmalqla yyriygqaca tyesaslrmf hlgrtdtirs asvasltfvk
      481 amddpnvteh ekvellrkav qahraytdra irgeafdrhl lglkmqaied lvsmpdifmd
      541 tsyaiamhfn lstsqvpakt dcvmffgpvv pdgygvcynp methinfsvs aynscadtna
      601 vhlahyleka lldmrallqs hprakl
//
LOCUS       XP_061010419             585 aa            linear   MAM 02-DEC-2023
DEFINITION  carnitine O-acetyltransferase isoform X5 [Dama dama].
ACCESSION   XP_061010419
VERSION     XP_061010419.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154436.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..585
                     /product="carnitine O-acetyltransferase isoform X5"
                     /calculated_mol_wt=65862
     Region          53..568
                     /region_name="Carn_acyltransf"
                     /note="Choline/Carnitine o-acyltransferase; pfam00755"
                     /db_xref="CDD:459926"
     CDS             1..585
                     /gene="CRAT"
                     /coded_by="XM_061154436.1:16..1773"
                     /db_xref="GeneID:133064400"
ORIGIN      
        1 mrgpghirrc splrpqisrq klpagllcdl gtlpfftpcq gpmassfprg vpkrsvlsdw
       61 wlktaylqyr qplviysspg vmlpkqdfvd rqgqlrfaak liegvldfkt midnetlpve
      121 ylggkplcmn qyyqilsscr vpgpkqdlvt kfsrtkkppm hitvvhnyqf feldvyhsdg
      181 tpltsdqift qlekiwnssl qtnkepvgil tsnhrnswak aystlikdkv nresvlsiqr
      241 siftvcldap mprvsedtyr sqvagqmlhg ggsklnsgnr wfdktlqfiv aedgacglvy
      301 ehaaaegppi vslldhvmef tkkpelvrsp mvplpmpkkl rfnitpeiks diekakqnls
      361 imiqdlditv mvfhhfgkdf pkseklspda fiqmalqlay yriygqacat yesaslrmfh
      421 lgrtdtirsa svasltfvka mddpnvtehe kvellrkavq ahraytdrai rgeafdrhll
      481 glkmqaiedl vsmpdifmdt syaiamhfnl stsqvpaktd cvmffgpvvp dgygvcynpm
      541 ethinfsvsa ynscadtnav hlahylekal ldmrallqsh prakl
//
LOCUS       XP_061010420             238 aa            linear   MAM 02-DEC-2023
DEFINITION  dolichyldiphosphatase 1 [Dama dama].
ACCESSION   XP_061010420
VERSION     XP_061010420.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154437.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..238
                     /product="dolichyldiphosphatase 1"
                     /calculated_mol_wt=26979
     Region          16..180
                     /region_name="PAP2_dolichyldiphosphatase"
                     /note="PAP2_like proteins, dolichyldiphosphatase
                     subfamily. Dolichyldiphosphatase is a membrane-associated
                     protein located in the endoplasmic reticulum and
                     hydrolyzes dolichyl pyrophosphate, as well as
                     dolichylmonophosphate at a low rate. The enzyme is...;
                     cd03382"
                     /db_xref="CDD:239477"
     Site            order(77,84,101..103,154,160,164)
                     /site_type="active"
                     /db_xref="CDD:239477"
     CDS             1..238
                     /gene="DOLPP1"
                     /coded_by="XM_061154437.1:62..778"
                     /db_xref="GeneID:133064401"
ORIGIN      
        1 maadgqcslp aswrpvtlth veypagdlsg hvlaylslsp vfvivgfvtl iifkrelhti
       61 sflgglalne gvnwlikhvi qeprpcggph pavstkygmp sshsqfmwff svysflflyl
      121 rmhqtnnarf ldllwrhvls lglltvaflv sysrvyllyh twsqvlyggi agglmaiawf
      181 iftqevltpl fpriaawpis efflirdtsl ipnvlwfeyt vtraearnrq rklgtklq
//
LOCUS       XP_061010421              63 aa            linear   MAM 02-DEC-2023
DEFINITION  cytochrome c oxidase subunit 7C, mitochondrial-like [Dama dama].
ACCESSION   XP_061010421
VERSION     XP_061010421.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154438.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..63
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..63
                     /product="cytochrome c oxidase subunit 7C,
                     mitochondrial-like"
                     /calculated_mol_wt=7196
     Region          17..62
                     /region_name="Cyt_c_Oxidase_VIIc"
                     /note="Cytochrome c oxidase subunit VIIc. Cytochrome c
                     oxidase (CcO), the terminal oxidase in the respiratory
                     chains of eukaryotes and most bacteria, is a multi-chain
                     transmembrane protein located in the inner membrane of
                     mitochondria and the cell membrane of...; cd00929"
                     /db_xref="CDD:238469"
     Site            order(19..21,23,25..26,28,31..32,34,44,47..49,52..53,55,
                     58..59,62)
                     /site_type="other"
                     /note="Subunit VIIc/I interface [polypeptide binding]"
                     /db_xref="CDD:238469"
     Site            order(34,49,53,57)
                     /site_type="other"
                     /note="Subunit VIIc/VIIIb interface [polypeptide binding]"
                     /db_xref="CDD:238469"
     Site            order(58,62)
                     /site_type="other"
                     /note="Subunit VIIc/VIIa interface [polypeptide binding]"
                     /db_xref="CDD:238469"
     CDS             1..63
                     /gene="LOC133064402"
                     /coded_by="XM_061154438.1:1757..1948"
                     /db_xref="GeneID:133064402"
ORIGIN      
        1 mlgqsvwrft tsvvhrshye egpgknipfs venkwrllam mtlffgsgfa apffivrhql
       61 lkk
//
LOCUS       XP_061010422             593 aa            linear   MAM 02-DEC-2023
DEFINITION  mitoguardin 2 [Dama dama].
ACCESSION   XP_061010422
VERSION     XP_061010422.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154439.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..593
                     /product="mitoguardin 2"
                     /calculated_mol_wt=65468
     Region          31..568
                     /region_name="Miga"
                     /note="Mitoguardin; pfam10265"
                     /db_xref="CDD:463034"
     CDS             1..593
                     /gene="MIGA2"
                     /coded_by="XM_061154439.1:223..2004"
                     /db_xref="GeneID:133064404"
ORIGIN      
        1 mafrrtegms miqalamtva eipvflyttf gqsafsqlrl tpglrkvlfa talgtvalal
       61 aahqlkrrrr kkkqvgpemg gehlgtgtlp ilmarkvpsm kkgyssrrvq spssksndtl
      121 sgissiepsk hsgsshslas mvvvnssspt aacsgpwetr gieesvttvd gnaeslymqg
      181 melfeealqk weqalsvgqr gdssstptpg dglrnpetas ealsepesqr kefaeklesl
      241 lhrayhlqee fgstfpadsm lldlertlml pltegslrlr addedsltse dsffsatelf
      301 eslqvgdypi plsrpaaaye ealqlvkegk vpcrtlrtel lgcysdqdfl aklhcvrqaf
      361 eglledkshq lffgevgrqm vtglmtkaek spkgflesye emlsyalrpe twattrlele
      421 grgvvcmsff divldfilmd afedlenpps svlavlrnrw lsdsfketal atacwsvlka
      481 krrllmvpdg fishfysvse hvspvlafgf lgpkpqlsev caffkhqivq yltdmfdldn
      541 vrytsvpala edilqlsrrr seillgylgv paagsiglng vlprenrppe alq
//
LOCUS       XP_061010423             593 aa            linear   MAM 02-DEC-2023
DEFINITION  mitoguardin 2 [Dama dama].
ACCESSION   XP_061010423
VERSION     XP_061010423.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154440.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..593
                     /product="mitoguardin 2"
                     /calculated_mol_wt=65468
     Region          31..568
                     /region_name="Miga"
                     /note="Mitoguardin; pfam10265"
                     /db_xref="CDD:463034"
     CDS             1..593
                     /gene="MIGA2"
                     /coded_by="XM_061154440.1:273..2054"
                     /db_xref="GeneID:133064404"
ORIGIN      
        1 mafrrtegms miqalamtva eipvflyttf gqsafsqlrl tpglrkvlfa talgtvalal
       61 aahqlkrrrr kkkqvgpemg gehlgtgtlp ilmarkvpsm kkgyssrrvq spssksndtl
      121 sgissiepsk hsgsshslas mvvvnssspt aacsgpwetr gieesvttvd gnaeslymqg
      181 melfeealqk weqalsvgqr gdssstptpg dglrnpetas ealsepesqr kefaeklesl
      241 lhrayhlqee fgstfpadsm lldlertlml pltegslrlr addedsltse dsffsatelf
      301 eslqvgdypi plsrpaaaye ealqlvkegk vpcrtlrtel lgcysdqdfl aklhcvrqaf
      361 eglledkshq lffgevgrqm vtglmtkaek spkgflesye emlsyalrpe twattrlele
      421 grgvvcmsff divldfilmd afedlenpps svlavlrnrw lsdsfketal atacwsvlka
      481 krrllmvpdg fishfysvse hvspvlafgf lgpkpqlsev caffkhqivq yltdmfdldn
      541 vrytsvpala edilqlsrrr seillgylgv paagsiglng vlprenrppe alq
//
LOCUS       XP_061010425            1752 aa            linear   MAM 02-DEC-2023
DEFINITION  nucleoporin NUP188 isoform X1 [Dama dama].
ACCESSION   XP_061010425
VERSION     XP_061010425.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154442.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1752
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1752
                     /product="nucleoporin NUP188 isoform X1"
                     /calculated_mol_wt=196054
     Region          31..941
                     /region_name="Nup188"
                     /note="Nucleoporin subcomplex protein binding to Pom34;
                     pfam10487"
                     /db_xref="CDD:463110"
     CDS             1..1752
                     /gene="NUP188"
                     /coded_by="XM_061154442.1:48..5306"
                     /db_xref="GeneID:133064406"
ORIGIN      
        1 maaaaggpcv rssrelwtil lgrsalreln qieaelnkhw qrlleglsyy kppspssaek
       61 vkaskdvasp lkelglrisk flgldeeqsv qllqcflqed yrgtrdslkt vlqderqsqa
      121 lilkiadyyy eertcilrcv lhlltyfqde rhpyrveyad cvdklekelv tkyrqqfeel
      181 ykteaptwet hgnlmterqv srwfvqclre qsmlleiifl yyayfemaps dllvltkmfk
      241 eqgfgsrqtn rhlvdetmdp fvdrigyfsa lilvegmdie slhkcalddr relhqfaqdg
      301 licqdmdrlm ltfgdiphha pvllawallr htlnpeetss vvrkiggtai qlnvfqyltr
      361 llrslasggn dcttstacmc vygllsfvlt slelhtlgnq qdvidtacev ladpslpelf
      421 wgteptsglg iildsvcgmf phllspllql lralvsgkst akkvysfldk msfynelykh
      481 kphdvished gtlwrrqtpk llyplggqtn lripqgtvgq vvlddraylv rweysysswt
      541 lftceiemll hvvstadviq hcqrvkpiid lvhkvistdl siadcllpit sriymllqrl
      601 ttvisppvdv iascvncltv laarnpakvw tdllhtgflp fvahqvsnms qmisaegmna
      661 ggygnllmns eqpqgeygvt iaflrlittl vkgqlgstqs qglvpcvmfv lkemlpsyhk
      721 wrynshgvre qigclileli hsilnlchet dlhsshtpsl qslcicslay teagqtvini
      781 mgigvdtidm vmaaqprsdg aegqgqgqll iktvklafsv tnnvirlkpp snvvspleqa
      841 ltqhgahgnn liavlakyiy hkhdpalprl aiqllkrlat vapmsvyacl gsdaaairda
      901 fltrlqskie dmrikvmile fltvavetqp glielflnle vkdgsdgske fslgvwsclh
      961 avleligsqq qdrywcppll hraaiaflha lwqdrrdsam lvlrtkpkfw enltsplfgt
     1021 lsppsetsep siletcalim kiicleiyyv vkgsldqslk dtlkkfssek rfaywsgyvk
     1081 slaahmadte gtsctslvec qmlvsawrmf liiatshaei thltdsavrr qlfldvlegt
     1141 kalllvpasv nclrlgsmmc tlllillrqw krelgsvdei lgplteileg vlqadqqlme
     1201 ktkakvfsaf itvlqmkemr vndipqysql vlnvcetlqe evialfdqtr hslaagsate
     1261 dkdsmetddc srlrhkdqrd gqvcvlglhl akelcevded geswlqvtrr lpilptlftt
     1321 levslrvkqn lhfteaalhl lltlartqqg atavagagit qsiclpllsv yqlssngtvq
     1381 tpgasrksld apswpgvyrl smslmerllk tlrynfltea ldfvgvhqer tlqclnavrt
     1441 vqslacleea dhtvgfllql ssfrkewhfh lpqlmrdvqv nlgylcqact sllhsrkmlq
     1501 hylqnkngeg ipsavgpraq rpptaapaap scssskqpap dteaseqral rtvqygllri
     1561 lsrtlaalrr ftpdvcqvll dqsldlaeys flfalsfttp tfdsegapsf gtllatvnva
     1621 lnmlgeldkk kepltqavgl stqvegtrtl ksllmftmen cfyllisqam rylrdpavhp
     1681 rdkqrmkqel sselstllss lsryfrrgap sspaagvlps pqgkstslsk vspesqepli
     1741 qlvqafvrhv qr
//
LOCUS       XP_061010426            1751 aa            linear   MAM 02-DEC-2023
DEFINITION  nucleoporin NUP188 isoform X2 [Dama dama].
ACCESSION   XP_061010426
VERSION     XP_061010426.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154443.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1751
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1751
                     /product="nucleoporin NUP188 isoform X2"
                     /calculated_mol_wt=195926
     Region          31..941
                     /region_name="Nup188"
                     /note="Nucleoporin subcomplex protein binding to Pom34;
                     pfam10487"
                     /db_xref="CDD:463110"
     CDS             1..1751
                     /gene="NUP188"
                     /coded_by="XM_061154443.1:48..5303"
                     /db_xref="GeneID:133064406"
ORIGIN      
        1 maaaaggpcv rssrelwtil lgrsalreln qieaelnkhw qrlleglsyy kppspssaek
       61 vkaskdvasp lkelglrisk flgldeeqsv qllqcflqed yrgtrdslkt vlqderqsqa
      121 lilkiadyyy eertcilrcv lhlltyfqde rhpyrveyad cvdklekelv tkyrqqfeel
      181 ykteaptwet hgnlmterqv srwfvqclre qsmlleiifl yyayfemaps dllvltkmfk
      241 eqgfgsrqtn rhlvdetmdp fvdrigyfsa lilvegmdie slhkcalddr relhqfaqdg
      301 licqdmdrlm ltfgdiphha pvllawallr htlnpeetss vvrkiggtai qlnvfqyltr
      361 llrslasggn dcttstacmc vygllsfvlt slelhtlgnq qdvidtacev ladpslpelf
      421 wgteptsglg iildsvcgmf phllspllql lralvsgkst akkvysfldk msfynelykh
      481 kphdvished gtlwrrqtpk llyplggqtn lripqgtvgq vvlddraylv rweysysswt
      541 lftceiemll hvvstadviq hcqrvkpiid lvhkvistdl siadcllpit sriymllqrl
      601 ttvisppvdv iascvncltv laarnpakvw tdllhtgflp fvahqvsnms qmisaegmna
      661 ggygnllmns eqpqgeygvt iaflrlittl vkgqlgstqs qglvpcvmfv lkemlpsyhk
      721 wrynshgvre qigclileli hsilnlchet dlhsshtpsl qslcicslay teagqtvini
      781 mgigvdtidm vmaaqprsdg aegqgqgqll iktvklafsv tnnvirlkpp snvvspleqa
      841 ltqhgahgnn liavlakyiy hkhdpalprl aiqllkrlat vapmsvyacl gsdaaairda
      901 fltrlqskie dmrikvmile fltvavetqp glielflnle vkdgsdgske fslgvwsclh
      961 avleligsqq qdrywcppll hraaiaflha lwqdrrdsam lvlrtkpkfw enltsplfgt
     1021 lsppsetsep siletcalim kiicleiyyv vkgsldqslk dtlkkfssek rfaywsgyvk
     1081 slaahmadte gtsctslvec qmlvsawrmf liiatshaei thltdsavrr qlfldvlegt
     1141 kalllvpasv nclrlgsmmc tlllillrqw krelgsvdei lgplteileg vlqadqqlme
     1201 ktkakvfsaf itvlqmkemr vndipqysql vlnvcetlqe evialfdqtr hslaagsate
     1261 dkdsmetddc srlrhkdqrd gvcvlglhla kelcevdedg eswlqvtrrl pilptlfttl
     1321 evslrvkqnl hfteaalhll ltlartqqga tavagagitq siclpllsvy qlssngtvqt
     1381 pgasrkslda pswpgvyrls mslmerllkt lrynflteal dfvgvhqert lqclnavrtv
     1441 qslacleead htvgfllqls sfrkewhfhl pqlmrdvqvn lgylcqacts llhsrkmlqh
     1501 ylqnkngegi psavgpraqr pptaapaaps cssskqpapd teaseqralr tvqygllril
     1561 srtlaalrrf tpdvcqvlld qsldlaeysf lfalsfttpt fdsegapsfg tllatvnval
     1621 nmlgeldkkk epltqavgls tqvegtrtlk sllmftmenc fyllisqamr ylrdpavhpr
     1681 dkqrmkqels selstllssl sryfrrgaps spaagvlpsp qgkstslskv spesqepliq
     1741 lvqafvrhvq r
//
LOCUS       XP_061010427            1668 aa            linear   MAM 02-DEC-2023
DEFINITION  nucleoporin NUP188 isoform X3 [Dama dama].
ACCESSION   XP_061010427
VERSION     XP_061010427.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154444.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1668
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1668
                     /product="nucleoporin NUP188 isoform X3"
                     /calculated_mol_wt=186329
     Region          31..941
                     /region_name="Nup188"
                     /note="Nucleoporin subcomplex protein binding to Pom34;
                     pfam10487"
                     /db_xref="CDD:463110"
     CDS             1..1668
                     /gene="NUP188"
                     /coded_by="XM_061154444.1:48..5054"
                     /db_xref="GeneID:133064406"
ORIGIN      
        1 maaaaggpcv rssrelwtil lgrsalreln qieaelnkhw qrlleglsyy kppspssaek
       61 vkaskdvasp lkelglrisk flgldeeqsv qllqcflqed yrgtrdslkt vlqderqsqa
      121 lilkiadyyy eertcilrcv lhlltyfqde rhpyrveyad cvdklekelv tkyrqqfeel
      181 ykteaptwet hgnlmterqv srwfvqclre qsmlleiifl yyayfemaps dllvltkmfk
      241 eqgfgsrqtn rhlvdetmdp fvdrigyfsa lilvegmdie slhkcalddr relhqfaqdg
      301 licqdmdrlm ltfgdiphha pvllawallr htlnpeetss vvrkiggtai qlnvfqyltr
      361 llrslasggn dcttstacmc vygllsfvlt slelhtlgnq qdvidtacev ladpslpelf
      421 wgteptsglg iildsvcgmf phllspllql lralvsgkst akkvysfldk msfynelykh
      481 kphdvished gtlwrrqtpk llyplggqtn lripqgtvgq vvlddraylv rweysysswt
      541 lftceiemll hvvstadviq hcqrvkpiid lvhkvistdl siadcllpit sriymllqrl
      601 ttvisppvdv iascvncltv laarnpakvw tdllhtgflp fvahqvsnms qmisaegmna
      661 ggygnllmns eqpqgeygvt iaflrlittl vkgqlgstqs qglvpcvmfv lkemlpsyhk
      721 wrynshgvre qigclileli hsilnlchet dlhsshtpsl qslcicslay teagqtvini
      781 mgigvdtidm vmaaqprsdg aegqgqgqll iktvklafsv tnnvirlkpp snvvspleqa
      841 ltqhgahgnn liavlakyiy hkhdpalprl aiqllkrlat vapmsvyacl gsdaaairda
      901 fltrlqskie dmrikvmile fltvavetqp glielflnle vkdgsdgske fslgvwsclh
      961 avleligsqq qdrywcppll hraaiaflha lwqdrrdsam lvlrtkpkfw enltsplfgt
     1021 lsppsetsep siletcalim kiicleiyyv vkgsldqslk dtlkkfssek rfaywsgyvk
     1081 slaahmadte gtsctslvec qmlvsawrmf liiatshaei thltdsavrr qlfldvlegt
     1141 kalllvpasv nclrlgsmmc tlllillrqw krelgsvdei lgplteileg vlqadqqlme
     1201 ktkakvfsaf itvlqmkemr vndipqysql vlnvcetlqe evialfdqtr hslaagsate
     1261 dkdsmetddc srlrhkdqrd gqvcvlglhl akelcevded geswlqvtrr lpilptlftt
     1321 levslrvkqn lhfteaalhl lltlartqqg atavagagit qsiclpllsv yqlssngtvq
     1381 tpgasrksld apswpgvyrl smslmerllk tlrynfltea ldfvgvhqer tlqclnavrt
     1441 vqslacleea dhtvgfllql ssfrkewhfh lpqlmrdvqv nlgylcqact sllhsrkmlq
     1501 hylqnkngeg ipsavgpraq rpptaapaap scssskqpap dteaseqral rtvqygllri
     1561 lsrtlaalrr ftpdvcqvll dqsldlaeys flfalsfttp tfdsegapsf gtllatvnva
     1621 lnmlgeldkk kepltqavgl stqvegtrtl krcvtsgtrl ctpgtssg
//
LOCUS       XP_061010428             810 aa            linear   MAM 02-DEC-2023
DEFINITION  volume-regulated anion channel subunit LRRC8A [Dama dama].
ACCESSION   XP_061010428
VERSION     XP_061010428.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154445.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..810
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..810
                     /product="volume-regulated anion channel subunit LRRC8A"
                     /calculated_mol_wt=93894
     Region          1..340
                     /region_name="Pannexin_like"
                     /note="Pannexin-like TM region of LRRC8; pfam12534"
                     /db_xref="CDD:463622"
     Region          420..447
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          448..470
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          471..494
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          495..517
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          503..>781
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          518..545
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          546..568
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          569..592
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          593..615
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          616..640
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          641..663
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          664..686
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          687..709
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          710..732
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          733..755
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..810
                     /gene="LRRC8A"
                     /coded_by="XM_061154445.1:224..2656"
                     /db_xref="GeneID:133064408"
ORIGIN      
        1 mipvtelryf adtqpayril kpwwdvftdy isivmlmiav fggtlqvtqd kmiclpckwv
       61 tkdscndsfr gwaapgpepp ypnstigptp dtgptgikyd ldrhqynyvd avcyenrlhw
      121 fakyfpylvl lhtliflacs nfwfkfprts sklehfvsil lkcfdspwtt ralsetvvee
      181 sdpkpafskm ngsmdkksst vsedveatvp mlqrtksrie qgivdrsetg vldkkegeqa
      241 kalfekvkkf rthveegdiv yrlymrqtii kvikfiliic ytvyyvhnik fdvdctvdie
      301 sltgyrtyrc ahplatlfki lasfyislvi fyglicmytl wwmlrrslkk ysfesirees
      361 sysdipdvkn dfafmlhlid qydplyskrf avflsevsen klrqlnlnne wtldklrqrl
      421 tknaqdklel hlfmlsgipd tvfdlvelev lklelipdvt ippsiaqltg lkelwlyhta
      481 akieapalaf lrenlralhi kftdikeipl wiyslktlee lhltgnlsae nnrfividgl
      541 relkrlkvlr lksnlsklpq vvtdvgvhlq klsinnegtk livlnslkkm anltelelir
      601 cdleriphsi fslhnlqeid lkdnnlktie eiisfqhlhr ltclklwynh iayipiqign
      661 ltnlerlyln rnkiekiptq lfycrklryl dlshnnltfl padigllqsl qnlavtanri
      721 ealppelfqc rklralhlgn nvlqslpsrv geltsltqie lrgnrleclp velgecpllk
      781 rsglvveedl fntlppevke rlwradkeqa
//
LOCUS       XP_061010429             810 aa            linear   MAM 02-DEC-2023
DEFINITION  volume-regulated anion channel subunit LRRC8A [Dama dama].
ACCESSION   XP_061010429
VERSION     XP_061010429.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154446.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..810
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..810
                     /product="volume-regulated anion channel subunit LRRC8A"
                     /calculated_mol_wt=93894
     Region          1..340
                     /region_name="Pannexin_like"
                     /note="Pannexin-like TM region of LRRC8; pfam12534"
                     /db_xref="CDD:463622"
     Region          420..447
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          448..470
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          471..494
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          495..517
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          503..>781
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          518..545
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          546..568
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          569..592
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          593..615
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          616..640
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          641..663
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          664..686
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          687..709
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          710..732
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          733..755
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..810
                     /gene="LRRC8A"
                     /coded_by="XM_061154446.1:208..2640"
                     /db_xref="GeneID:133064408"
ORIGIN      
        1 mipvtelryf adtqpayril kpwwdvftdy isivmlmiav fggtlqvtqd kmiclpckwv
       61 tkdscndsfr gwaapgpepp ypnstigptp dtgptgikyd ldrhqynyvd avcyenrlhw
      121 fakyfpylvl lhtliflacs nfwfkfprts sklehfvsil lkcfdspwtt ralsetvvee
      181 sdpkpafskm ngsmdkksst vsedveatvp mlqrtksrie qgivdrsetg vldkkegeqa
      241 kalfekvkkf rthveegdiv yrlymrqtii kvikfiliic ytvyyvhnik fdvdctvdie
      301 sltgyrtyrc ahplatlfki lasfyislvi fyglicmytl wwmlrrslkk ysfesirees
      361 sysdipdvkn dfafmlhlid qydplyskrf avflsevsen klrqlnlnne wtldklrqrl
      421 tknaqdklel hlfmlsgipd tvfdlvelev lklelipdvt ippsiaqltg lkelwlyhta
      481 akieapalaf lrenlralhi kftdikeipl wiyslktlee lhltgnlsae nnrfividgl
      541 relkrlkvlr lksnlsklpq vvtdvgvhlq klsinnegtk livlnslkkm anltelelir
      601 cdleriphsi fslhnlqeid lkdnnlktie eiisfqhlhr ltclklwynh iayipiqign
      661 ltnlerlyln rnkiekiptq lfycrklryl dlshnnltfl padigllqsl qnlavtanri
      721 ealppelfqc rklralhlgn nvlqslpsrv geltsltqie lrgnrleclp velgecpllk
      781 rsglvveedl fntlppevke rlwradkeqa
//
LOCUS       XP_061010430             810 aa            linear   MAM 02-DEC-2023
DEFINITION  volume-regulated anion channel subunit LRRC8A [Dama dama].
ACCESSION   XP_061010430
VERSION     XP_061010430.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154447.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..810
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..810
                     /product="volume-regulated anion channel subunit LRRC8A"
                     /calculated_mol_wt=93894
     Region          1..340
                     /region_name="Pannexin_like"
                     /note="Pannexin-like TM region of LRRC8; pfam12534"
                     /db_xref="CDD:463622"
     Region          420..447
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          448..470
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          471..494
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          495..517
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          503..>781
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          518..545
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          546..568
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          569..592
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          593..615
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          616..640
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          641..663
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          664..686
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          687..709
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          710..732
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          733..755
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..810
                     /gene="LRRC8A"
                     /coded_by="XM_061154447.1:95..2527"
                     /db_xref="GeneID:133064408"
ORIGIN      
        1 mipvtelryf adtqpayril kpwwdvftdy isivmlmiav fggtlqvtqd kmiclpckwv
       61 tkdscndsfr gwaapgpepp ypnstigptp dtgptgikyd ldrhqynyvd avcyenrlhw
      121 fakyfpylvl lhtliflacs nfwfkfprts sklehfvsil lkcfdspwtt ralsetvvee
      181 sdpkpafskm ngsmdkksst vsedveatvp mlqrtksrie qgivdrsetg vldkkegeqa
      241 kalfekvkkf rthveegdiv yrlymrqtii kvikfiliic ytvyyvhnik fdvdctvdie
      301 sltgyrtyrc ahplatlfki lasfyislvi fyglicmytl wwmlrrslkk ysfesirees
      361 sysdipdvkn dfafmlhlid qydplyskrf avflsevsen klrqlnlnne wtldklrqrl
      421 tknaqdklel hlfmlsgipd tvfdlvelev lklelipdvt ippsiaqltg lkelwlyhta
      481 akieapalaf lrenlralhi kftdikeipl wiyslktlee lhltgnlsae nnrfividgl
      541 relkrlkvlr lksnlsklpq vvtdvgvhlq klsinnegtk livlnslkkm anltelelir
      601 cdleriphsi fslhnlqeid lkdnnlktie eiisfqhlhr ltclklwynh iayipiqign
      661 ltnlerlyln rnkiekiptq lfycrklryl dlshnnltfl padigllqsl qnlavtanri
      721 ealppelfqc rklralhlgn nvlqslpsrv geltsltqie lrgnrleclp velgecpllk
      781 rsglvveedl fntlppevke rlwradkeqa
//
LOCUS       XP_061010431             538 aa            linear   MAM 02-DEC-2023
DEFINITION  dolichol kinase [Dama dama].
ACCESSION   XP_061010431
VERSION     XP_061010431.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154448.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..538
                     /product="dolichol kinase"
                     /calculated_mol_wt=59091
     Region          333..524
                     /region_name="SEC59"
                     /note="Dolichol kinase [Posttranslational modification,
                     protein turnover, chaperones, Cell wall/membrane/envelope
                     biogenesis]; COG0170"
                     /db_xref="CDD:439940"
     CDS             1..538
                     /gene="DOLK"
                     /coded_by="XM_061154448.1:287..1903"
                     /db_xref="GeneID:133064409"
ORIGIN      
        1 mtrecapptp gsgaplsgsv laeaavvfvv vlsvhaavwd ryswcavala vqafyvqykw
       61 drllqqgsav fqfrmsansg llpasvvmpl lglvmkercq aagnpyferf givvaatgma
      121 valfssvlal gitrpvptnt ciisglaggv iiyimkhsls vgevievlea llifvylnmi
      181 llyllprcft pgeallvlgg isfmlnqlik rsltvvesqg dpldffllvv vvgmvlmgif
      241 fstlfvfmds gtwassiffh lmtcvlglgv vlpwlhrlir rnpllwlfqf lfqtetrvyl
      301 laywcllatm aclvvlyqna krssseskkh qaptitrkyf hfivvatyip giildrplly
      361 vaatvclavf ifleyvryfr ikplghtlrs llslflderd sgplilthiy lllgmslpiw
      421 lvprpctqkg slggaralvp yagvlavgvg dtvasifgst mgeirwpgtk ktfegtmtsi
      481 faqiisvali lifdsgvdln ysyawilgsi stvslleayt tqidnlllpl yllillma
//
LOCUS       XP_061010432             480 aa            linear   MAM 02-DEC-2023
DEFINITION  endophilin-B2 isoform X1 [Dama dama].
ACCESSION   XP_061010432
VERSION     XP_061010432.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154449.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..480
                     /product="endophilin-B2 isoform X1"
                     /calculated_mol_wt=53282
     Region          21..358
                     /region_name="BAR"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain, a
                     dimerization module that binds membranes and detects
                     membrane curvature; cl12013"
                     /db_xref="CDD:472257"
     Site            order(45,48..49,53,55..56,59..60,62..63,90..91,93..94,
                     97..98,100..101,104,148,151..152,320,323..324,326,330,
                     333..334,336..337,340..341,344..345,347..348,351..352,
                     354..355)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153301"
     Region          424..478
                     /region_name="SH3_Endophilin_B2"
                     /note="Src homology 3 domain of Endophilin-B2; cd11944"
                     /db_xref="CDD:212877"
     Site            order(429,431,434,438,458..459,472,474..475)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212877"
     CDS             1..480
                     /gene="SH3GLB2"
                     /coded_by="XM_061154449.1:100..1542"
                     /db_xref="GeneID:133064410"
ORIGIN      
        1 mdfnmkklas dagifftrav qfteekfgqa ekteldahfe sllaradstk nwtekilrqt
       61 evllqpnpsa rveeflyekl drkvpsrvtn gellaqymae aaselgpttp yehlswgsll
      121 ppesqsdrsl arlltprlcf sgktlikvae aekrlgaaer dfihtasinf ltplrnfleg
      181 dwktiskerr llqnrrldld askarlkkak aaeakattvp dfqetrprny ilsasasatl
      241 edtcrppswa ewkedypggw rrpcfflvpl npsvtlargc lslpkdgklw ndevdkaeqe
      301 lrvaqtefdr qaevtrllle gissthvnhl rclhefvesq ttyyaqcyrh mldlqkqlgs
      361 sqgaifpgtf vgtaepaspp lsstspttaa atmpmgpsva dlappgeaal cleevappas
      421 gtrkarvlyd yeaadssela lladelitvy slpgmdpdwl igergnkkgk vpvtylells
//
LOCUS       XP_061010433             475 aa            linear   MAM 02-DEC-2023
DEFINITION  endophilin-B2 isoform X2 [Dama dama].
ACCESSION   XP_061010433
VERSION     XP_061010433.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154450.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..475
                     /product="endophilin-B2 isoform X2"
                     /calculated_mol_wt=52894
     Region          21..358
                     /region_name="BAR"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain, a
                     dimerization module that binds membranes and detects
                     membrane curvature; cl12013"
                     /db_xref="CDD:472257"
     Site            order(45,48..49,53,55..56,59..60,62..63,90..91,93..94,
                     97..98,100..101,104,148,151..152,320,323..324,326,330,
                     333..334,336..337,340..341,344..345,347..348,351..352,
                     354..355)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153301"
     Region          419..473
                     /region_name="SH3_Endophilin_B2"
                     /note="Src homology 3 domain of Endophilin-B2; cd11944"
                     /db_xref="CDD:212877"
     Site            order(424,426,429,433,453..454,467,469..470)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212877"
     CDS             1..475
                     /gene="SH3GLB2"
                     /coded_by="XM_061154450.1:96..1523"
                     /db_xref="GeneID:133064410"
ORIGIN      
        1 mdfnmkklas dagifftrav qfteekfgqa ekteldahfe sllaradstk nwtekilrqt
       61 evllqpnpsa rveeflyekl drkvpsrvtn gellaqymae aaselgpttp yehlswgsll
      121 ppesqsdrsl arlltprlcf sgktlikvae aekrlgaaer dfihtasinf ltplrnfleg
      181 dwktiskerr llqnrrldld askarlkkak aaeakattvp dfqetrprny ilsasasatl
      241 edtcrppswa ewkedypggw rrpcfflvpl npsvtlargc lslpkdgklw ndevdkaeqe
      301 lrvaqtefdr qaevtrllle gissthvnhl rclhefvesq ttyyaqcyrh mldlqkqlgr
      361 fpgtfvgtae paspplssts pttaaatmpm gpsvadlapp geaalcleev appasgtrka
      421 rvlydyeaad sselallade litvyslpgm dpdwligerg nkkgkvpvty lells
//
LOCUS       XP_061010434             450 aa            linear   MAM 02-DEC-2023
DEFINITION  endophilin-B2 isoform X3 [Dama dama].
ACCESSION   XP_061010434
VERSION     XP_061010434.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154451.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..450
                     /product="endophilin-B2 isoform X3"
                     /calculated_mol_wt=49903
     Region          21..328
                     /region_name="BAR_Endophilin_B2"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of
                     Endophilin-B2; cd07617"
                     /db_xref="CDD:153301"
     Site            order(45,48..49,53,55..56,59..60,62..63,90..91,93..94,
                     97..98,100..101,104,118,121..122,290,293..294,296,300,
                     303..304,306..307,310..311,314..315,317..318,321..322,
                     324..325)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153301"
     Site            order(71,153,157,160,165..166,248,266,272)
                     /site_type="other"
                     /note="putative membrane interaction site"
                     /db_xref="CDD:153301"
     Region          394..448
                     /region_name="SH3_Endophilin_B2"
                     /note="Src homology 3 domain of Endophilin-B2; cd11944"
                     /db_xref="CDD:212877"
     Site            order(399,401,404,408,428..429,442,444..445)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212877"
     CDS             1..450
                     /gene="SH3GLB2"
                     /coded_by="XM_061154451.1:94..1446"
                     /db_xref="GeneID:133064410"
ORIGIN      
        1 mdfnmkklas dagifftrav qfteekfgqa ekteldahfe sllaradstk nwtekilrqt
       61 evllqpnpsa rveeflyekl drkvpsrvtn gellaqymae aaselgpttp ygktlikvae
      121 aekrlgaaer dfihtasinf ltplrnfleg dwktiskerr llqnrrldld askarlkkak
      181 aaeakattvp dfqetrprny ilsasasatl edtcrppswa ewkedypggw rrpcfflvpl
      241 npsvtlargc lslpkdgklw ndevdkaeqe lrvaqtefdr qaevtrllle gissthvnhl
      301 rclhefvesq ttyyaqcyrh mldlqkqlgs sqgaifpgtf vgtaepaspp lsstspttaa
      361 atmpmgpsva dlappgeaal cleevappas gtrkarvlyd yeaadssela lladelitvy
      421 slpgmdpdwl igergnkkgk vpvtylells
//
LOCUS       XP_061010435             430 aa            linear   MAM 02-DEC-2023
DEFINITION  endophilin-B2 isoform X4 [Dama dama].
ACCESSION   XP_061010435
VERSION     XP_061010435.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154452.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..430
                     /product="endophilin-B2 isoform X4"
                     /calculated_mol_wt=47608
     Region          21..308
                     /region_name="BAR_Endophilin_B2"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of
                     Endophilin-B2; cd07617"
                     /db_xref="CDD:153301"
     Site            order(45,48..49,53,55..56,59..60,62..63,90..91,93..94,
                     97..98,100..101,104,148,151..152,270,273..274,276,280,
                     283..284,286..287,290..291,294..295,297..298,301..302,
                     304..305)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153301"
     Site            order(71,183,187,190,195..196,243,246,252)
                     /site_type="other"
                     /note="putative membrane interaction site"
                     /db_xref="CDD:153301"
     Region          374..428
                     /region_name="SH3_Endophilin_B2"
                     /note="Src homology 3 domain of Endophilin-B2; cd11944"
                     /db_xref="CDD:212877"
     Site            order(379,381,384,388,408..409,422,424..425)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212877"
     CDS             1..430
                     /gene="SH3GLB2"
                     /coded_by="XM_061154452.1:94..1386"
                     /db_xref="GeneID:133064410"
ORIGIN      
        1 mdfnmkklas dagifftrav qfteekfgqa ekteldahfe sllaradstk nwtekilrqt
       61 evllqpnpsa rveeflyekl drkvpsrvtn gellaqymae aaselgpttp yehlswgsll
      121 ppesqsdrsl arlltprlcf sgktlikvae aekrlgaaer dfihtasinf ltplrnfleg
      181 dwktiskerr llqnrrldld askarlkkak aaeakattvp dfqetrprny ilsasasalw
      241 ndevdkaeqe lrvaqtefdr qaevtrllle gissthvnhl rclhefvesq ttyyaqcyrh
      301 mldlqkqlgs sqgaifpgtf vgtaepaspp lsstspttaa atmpmgpsva dlappgeaal
      361 cleevappas gtrkarvlyd yeaadssela lladelitvy slpgmdpdwl igergnkkgk
      421 vpvtylells
//
LOCUS       XP_061010436             409 aa            linear   MAM 02-DEC-2023
DEFINITION  endophilin-B2 isoform X5 [Dama dama].
ACCESSION   XP_061010436
VERSION     XP_061010436.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154453.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..409
                     /product="endophilin-B2 isoform X5"
                     /calculated_mol_wt=45303
     Region          21..287
                     /region_name="BAR_Endophilin_B2"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of
                     Endophilin-B2; cd07617"
                     /db_xref="CDD:153301"
     Site            order(45,48..49,53,55..56,59..60,62..63,90..91,93..94,
                     97..98,100..101,104,148,151..152,249,252..253,255,259,
                     262..263,265..266,269..270,273..274,276..277,280..281,
                     283..284)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153301"
     Site            order(71,183,187,190,195..196,222,225,231)
                     /site_type="other"
                     /note="putative membrane interaction site"
                     /db_xref="CDD:153301"
     Region          353..407
                     /region_name="SH3_Endophilin_B2"
                     /note="Src homology 3 domain of Endophilin-B2; cd11944"
                     /db_xref="CDD:212877"
     Site            order(358,360,363,367,387..388,401,403..404)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212877"
     CDS             1..409
                     /gene="SH3GLB2"
                     /coded_by="XM_061154453.1:98..1327"
                     /db_xref="GeneID:133064410"
ORIGIN      
        1 mdfnmkklas dagifftrav qfteekfgqa ekteldahfe sllaradstk nwtekilrqt
       61 evllqpnpsa rveeflyekl drkvpsrvtn gellaqymae aaselgpttp yehlswgsll
      121 ppesqsdrsl arlltprlcf sgktlikvae aekrlgaaer dfihtasinf ltplrnfleg
      181 dwktiskerr llqnrrldld askarlkkak aaeakatlwn devdkaeqel rvaqtefdrq
      241 aevtrllleg issthvnhlr clhefvesqt tyyaqcyrhm ldlqkqlgss qgaifpgtfv
      301 gtaepasppl sstspttaaa tmpmgpsvad lappgeaalc leevappasg trkarvlydy
      361 eaadsselal ladelitvys lpgmdpdwli gergnkkgkv pvtylells
//
LOCUS       XP_061010437             400 aa            linear   MAM 02-DEC-2023
DEFINITION  endophilin-B2 isoform X6 [Dama dama].
ACCESSION   XP_061010437
VERSION     XP_061010437.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154454.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..400
                     /product="endophilin-B2 isoform X6"
                     /calculated_mol_wt=44229
     Region          21..278
                     /region_name="BAR_Endophilin_B2"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of
                     Endophilin-B2; cd07617"
                     /db_xref="CDD:153301"
     Site            order(45,48..49,53,55..56,59..60,62..63,90..91,93..94,
                     97..98,100..101,104,118,121..122,240,243..244,246,250,
                     253..254,256..257,260..261,264..265,267..268,271..272,
                     274..275)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153301"
     Site            order(71,153,157,160,165..166,213,216,222)
                     /site_type="other"
                     /note="putative membrane interaction site"
                     /db_xref="CDD:153301"
     Region          344..398
                     /region_name="SH3_Endophilin_B2"
                     /note="Src homology 3 domain of Endophilin-B2; cd11944"
                     /db_xref="CDD:212877"
     Site            order(349,351,354,358,378..379,392,394..395)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212877"
     CDS             1..400
                     /gene="SH3GLB2"
                     /coded_by="XM_061154454.1:87..1289"
                     /db_xref="GeneID:133064410"
ORIGIN      
        1 mdfnmkklas dagifftrav qfteekfgqa ekteldahfe sllaradstk nwtekilrqt
       61 evllqpnpsa rveeflyekl drkvpsrvtn gellaqymae aaselgpttp ygktlikvae
      121 aekrlgaaer dfihtasinf ltplrnfleg dwktiskerr llqnrrldld askarlkkak
      181 aaeakattvp dfqetrprny ilsasasalw ndevdkaeqe lrvaqtefdr qaevtrllle
      241 gissthvnhl rclhefvesq ttyyaqcyrh mldlqkqlgs sqgaifpgtf vgtaepaspp
      301 lsstspttaa atmpmgpsva dlappgeaal cleevappas gtrkarvlyd yeaadssela
      361 lladelitvy slpgmdpdwl igergnkkgk vpvtylells
//
LOCUS       XP_061010439             395 aa            linear   MAM 02-DEC-2023
DEFINITION  endophilin-B2 isoform X7 [Dama dama].
ACCESSION   XP_061010439
VERSION     XP_061010439.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154456.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..395
                     /product="endophilin-B2 isoform X7"
                     /calculated_mol_wt=43842
     Region          21..278
                     /region_name="BAR_Endophilin_B2"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of
                     Endophilin-B2; cd07617"
                     /db_xref="CDD:153301"
     Site            order(45,48..49,53,55..56,59..60,62..63,90..91,93..94,
                     97..98,100..101,104,118,121..122,240,243..244,246,250,
                     253..254,256..257,260..261,264..265,267..268,271..272,
                     274..275)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153301"
     Site            order(71,153,157,160,165..166,213,216,222)
                     /site_type="other"
                     /note="putative membrane interaction site"
                     /db_xref="CDD:153301"
     Region          339..393
                     /region_name="SH3_Endophilin_B2"
                     /note="Src homology 3 domain of Endophilin-B2; cd11944"
                     /db_xref="CDD:212877"
     Site            order(344,346,349,353,373..374,387,389..390)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212877"
     CDS             1..395
                     /gene="SH3GLB2"
                     /coded_by="XM_061154456.1:87..1274"
                     /db_xref="GeneID:133064410"
ORIGIN      
        1 mdfnmkklas dagifftrav qfteekfgqa ekteldahfe sllaradstk nwtekilrqt
       61 evllqpnpsa rveeflyekl drkvpsrvtn gellaqymae aaselgpttp ygktlikvae
      121 aekrlgaaer dfihtasinf ltplrnfleg dwktiskerr llqnrrldld askarlkkak
      181 aaeakattvp dfqetrprny ilsasasalw ndevdkaeqe lrvaqtefdr qaevtrllle
      241 gissthvnhl rclhefvesq ttyyaqcyrh mldlqkqlgr fpgtfvgtae paspplssts
      301 pttaaatmpm gpsvadlapp geaalcleev appasgtrka rvlydyeaad sselallade
      361 litvyslpgm dpdwligerg nkkgkvpvty lells
//
LOCUS       XP_061010440             379 aa            linear   MAM 02-DEC-2023
DEFINITION  endophilin-B2 isoform X8 [Dama dama].
ACCESSION   XP_061010440
VERSION     XP_061010440.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154457.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..379
                     /product="endophilin-B2 isoform X8"
                     /calculated_mol_wt=41924
     Region          21..257
                     /region_name="BAR_Endophilin_B2"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of
                     Endophilin-B2; cd07617"
                     /db_xref="CDD:153301"
     Site            order(45,48..49,53,55..56,59..60,62..63,90..91,93..94,
                     97..98,100..101,104,118,121..122,219,222..223,225,229,
                     232..233,235..236,239..240,243..244,246..247,250..251,
                     253..254)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153301"
     Site            order(71,153,157,160,165..166,192,195,201)
                     /site_type="other"
                     /note="putative membrane interaction site"
                     /db_xref="CDD:153301"
     Region          323..377
                     /region_name="SH3_Endophilin_B2"
                     /note="Src homology 3 domain of Endophilin-B2; cd11944"
                     /db_xref="CDD:212877"
     Site            order(328,330,333,337,357..358,371,373..374)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212877"
     CDS             1..379
                     /gene="SH3GLB2"
                     /coded_by="XM_061154457.1:91..1230"
                     /db_xref="GeneID:133064410"
ORIGIN      
        1 mdfnmkklas dagifftrav qfteekfgqa ekteldahfe sllaradstk nwtekilrqt
       61 evllqpnpsa rveeflyekl drkvpsrvtn gellaqymae aaselgpttp ygktlikvae
      121 aekrlgaaer dfihtasinf ltplrnfleg dwktiskerr llqnrrldld askarlkkak
      181 aaeakatlwn devdkaeqel rvaqtefdrq aevtrllleg issthvnhlr clhefvesqt
      241 tyyaqcyrhm ldlqkqlgss qgaifpgtfv gtaepasppl sstspttaaa tmpmgpsvad
      301 lappgeaalc leevappasg trkarvlydy eaadsselal ladelitvys lpgmdpdwli
      361 gergnkkgkv pvtylells
//
LOCUS       XP_061010441             291 aa            linear   MAM 02-DEC-2023
DEFINITION  phytanoyl-CoA dioxygenase domain-containing protein 1 isoform X1
            [Dama dama].
ACCESSION   XP_061010441
VERSION     XP_061010441.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154458.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..291
                     /product="phytanoyl-CoA dioxygenase domain-containing
                     protein 1 isoform X1"
                     /calculated_mol_wt=32422
     Region          12..259
                     /region_name="PhyH"
                     /note="Phytanoyl-CoA dioxygenase (PhyH); pfam05721"
                     /db_xref="CDD:399029"
     CDS             1..291
                     /gene="PHYHD1"
                     /coded_by="XM_061154458.1:183..1058"
                     /db_xref="GeneID:133064412"
ORIGIN      
        1 maclspsqlq kfqedgflvl egflsadece amqrrigeiv aemdvplhcr tefstqeeeq
       61 lraqgstdyf lssgdkirff fekgvfdkqg nflvppeksi nkighalhah dpifrcvths
      121 pkvqalarsl glqmpvvvqs myifkqphfg gevtphqdas flyteplgrv lglwialeda
      181 mlengclwfi pgshrggvsr rmvrapagsa pgtsflgsep irdnslfvpt pvlrgalvli
      241 hgevvhkser nfsdrsrqay tfhimeaagt vwspdnwlqp tpelpfpply i
//
LOCUS       XP_061010442             250 aa            linear   MAM 02-DEC-2023
DEFINITION  phytanoyl-CoA dioxygenase domain-containing protein 1 isoform X2
            [Dama dama].
ACCESSION   XP_061010442
VERSION     XP_061010442.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154459.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..250
                     /product="phytanoyl-CoA dioxygenase domain-containing
                     protein 1 isoform X2"
                     /calculated_mol_wt=26955
     Region          <111..218
                     /region_name="PhyH"
                     /note="Phytanoyl-CoA dioxygenase (PhyH); pfam05721"
                     /db_xref="CDD:399029"
     CDS             1..250
                     /gene="PHYHD1"
                     /coded_by="XM_061154459.1:232..984"
                     /db_xref="GeneID:133064412"
ORIGIN      
        1 mipfshippv tegslpcrql fpsctspsls lvrppplhhq aqgpspggdh plpepsllnp
       61 appapsafpp pcfgapairt plfghwivka plkvwcsest qflgkglspt svtphqdasf
      121 lyteplgrvl glwialedam lengclwfip gshrggvsrr mvrapagsap gtsflgsepi
      181 rdnslfvptp vlrgalvlih gevvhksern fsdrsrqayt fhimeaagtv wspdnwlqpt
      241 pelpfpplyi
//
LOCUS       XP_061010443             464 aa            linear   MAM 02-DEC-2023
DEFINITION  kynurenine--oxoglutarate transaminase 1 isoform X1 [Dama dama].
ACCESSION   XP_061010443
VERSION     XP_061010443.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154460.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..464
                     /product="kynurenine--oxoglutarate transaminase 1 isoform
                     X1"
                     /calculated_mol_wt=52172
     Region          46..462
                     /region_name="AspB"
                     /note="Aspartate/methionine/tyrosine aminotransferase
                     [Amino acid transport and metabolism]; COG0436"
                     /db_xref="CDD:440205"
     CDS             1..464
                     /gene="KYAT1"
                     /coded_by="XM_061154460.1:405..1799"
                     /db_xref="GeneID:133064413"
ORIGIN      
        1 malggmfrna aaiylhlvgp lrgkksgasl trylhrtltm akrlqarrld gidynpwvef
       61 vklaseeadv vnlgqgfpdf sppefaveaf qhavsgdfml nqytkafgyp pltkilasff
      121 gkllgqeidp lknvlvtvga ygalftafqa lvdegdevii iepffdcyep mtlmaggrpv
      181 fvplkpsptq kgepdsssnw qldptelask ftsrtkafil ntpnnplgkv fsreelelva
      241 slcrqydvvc itdevyqwlv fdgfqhisia slpgmwertl tigsagktfs vtgwkvgwvl
      301 gpdslmkhlr tvhqnsiyhc ptqgqaavaq sfereqlhfg qpssyfvqlp qyiqrcrdhm
      361 iqslqsvglr pvipqgsyfl itdisdfknk mpdlpgaade pydkrfvkwm iknkglvaip
      421 vsiffsvphq kffdhyirfc fvkdestlra mdqklqkwka eltp
//
LOCUS       XP_061010444             464 aa            linear   MAM 02-DEC-2023
DEFINITION  kynurenine--oxoglutarate transaminase 1 isoform X1 [Dama dama].
ACCESSION   XP_061010444
VERSION     XP_061010444.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154461.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..464
                     /product="kynurenine--oxoglutarate transaminase 1 isoform
                     X1"
                     /calculated_mol_wt=52172
     Region          46..462
                     /region_name="AspB"
                     /note="Aspartate/methionine/tyrosine aminotransferase
                     [Amino acid transport and metabolism]; COG0436"
                     /db_xref="CDD:440205"
     CDS             1..464
                     /gene="KYAT1"
                     /coded_by="XM_061154461.1:423..1817"
                     /db_xref="GeneID:133064413"
ORIGIN      
        1 malggmfrna aaiylhlvgp lrgkksgasl trylhrtltm akrlqarrld gidynpwvef
       61 vklaseeadv vnlgqgfpdf sppefaveaf qhavsgdfml nqytkafgyp pltkilasff
      121 gkllgqeidp lknvlvtvga ygalftafqa lvdegdevii iepffdcyep mtlmaggrpv
      181 fvplkpsptq kgepdsssnw qldptelask ftsrtkafil ntpnnplgkv fsreelelva
      241 slcrqydvvc itdevyqwlv fdgfqhisia slpgmwertl tigsagktfs vtgwkvgwvl
      301 gpdslmkhlr tvhqnsiyhc ptqgqaavaq sfereqlhfg qpssyfvqlp qyiqrcrdhm
      361 iqslqsvglr pvipqgsyfl itdisdfknk mpdlpgaade pydkrfvkwm iknkglvaip
      421 vsiffsvphq kffdhyirfc fvkdestlra mdqklqkwka eltp
//
LOCUS       XP_061010445             464 aa            linear   MAM 02-DEC-2023
DEFINITION  kynurenine--oxoglutarate transaminase 1 isoform X1 [Dama dama].
ACCESSION   XP_061010445
VERSION     XP_061010445.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154462.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..464
                     /product="kynurenine--oxoglutarate transaminase 1 isoform
                     X1"
                     /calculated_mol_wt=52172
     Region          46..462
                     /region_name="AspB"
                     /note="Aspartate/methionine/tyrosine aminotransferase
                     [Amino acid transport and metabolism]; COG0436"
                     /db_xref="CDD:440205"
     CDS             1..464
                     /gene="KYAT1"
                     /coded_by="XM_061154462.1:275..1669"
                     /db_xref="GeneID:133064413"
ORIGIN      
        1 malggmfrna aaiylhlvgp lrgkksgasl trylhrtltm akrlqarrld gidynpwvef
       61 vklaseeadv vnlgqgfpdf sppefaveaf qhavsgdfml nqytkafgyp pltkilasff
      121 gkllgqeidp lknvlvtvga ygalftafqa lvdegdevii iepffdcyep mtlmaggrpv
      181 fvplkpsptq kgepdsssnw qldptelask ftsrtkafil ntpnnplgkv fsreelelva
      241 slcrqydvvc itdevyqwlv fdgfqhisia slpgmwertl tigsagktfs vtgwkvgwvl
      301 gpdslmkhlr tvhqnsiyhc ptqgqaavaq sfereqlhfg qpssyfvqlp qyiqrcrdhm
      361 iqslqsvglr pvipqgsyfl itdisdfknk mpdlpgaade pydkrfvkwm iknkglvaip
      421 vsiffsvphq kffdhyirfc fvkdestlra mdqklqkwka eltp
//
LOCUS       XP_061010446             464 aa            linear   MAM 02-DEC-2023
DEFINITION  kynurenine--oxoglutarate transaminase 1 isoform X1 [Dama dama].
ACCESSION   XP_061010446
VERSION     XP_061010446.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154463.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..464
                     /product="kynurenine--oxoglutarate transaminase 1 isoform
                     X1"
                     /calculated_mol_wt=52172
     Region          46..462
                     /region_name="AspB"
                     /note="Aspartate/methionine/tyrosine aminotransferase
                     [Amino acid transport and metabolism]; COG0436"
                     /db_xref="CDD:440205"
     CDS             1..464
                     /gene="KYAT1"
                     /coded_by="XM_061154463.1:240..1634"
                     /db_xref="GeneID:133064413"
ORIGIN      
        1 malggmfrna aaiylhlvgp lrgkksgasl trylhrtltm akrlqarrld gidynpwvef
       61 vklaseeadv vnlgqgfpdf sppefaveaf qhavsgdfml nqytkafgyp pltkilasff
      121 gkllgqeidp lknvlvtvga ygalftafqa lvdegdevii iepffdcyep mtlmaggrpv
      181 fvplkpsptq kgepdsssnw qldptelask ftsrtkafil ntpnnplgkv fsreelelva
      241 slcrqydvvc itdevyqwlv fdgfqhisia slpgmwertl tigsagktfs vtgwkvgwvl
      301 gpdslmkhlr tvhqnsiyhc ptqgqaavaq sfereqlhfg qpssyfvqlp qyiqrcrdhm
      361 iqslqsvglr pvipqgsyfl itdisdfknk mpdlpgaade pydkrfvkwm iknkglvaip
      421 vsiffsvphq kffdhyirfc fvkdestlra mdqklqkwka eltp
//
LOCUS       XP_061010447             464 aa            linear   MAM 02-DEC-2023
DEFINITION  kynurenine--oxoglutarate transaminase 1 isoform X1 [Dama dama].
ACCESSION   XP_061010447
VERSION     XP_061010447.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154464.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..464
                     /product="kynurenine--oxoglutarate transaminase 1 isoform
                     X1"
                     /calculated_mol_wt=52172
     Region          46..462
                     /region_name="AspB"
                     /note="Aspartate/methionine/tyrosine aminotransferase
                     [Amino acid transport and metabolism]; COG0436"
                     /db_xref="CDD:440205"
     CDS             1..464
                     /gene="KYAT1"
                     /coded_by="XM_061154464.1:125..1519"
                     /db_xref="GeneID:133064413"
ORIGIN      
        1 malggmfrna aaiylhlvgp lrgkksgasl trylhrtltm akrlqarrld gidynpwvef
       61 vklaseeadv vnlgqgfpdf sppefaveaf qhavsgdfml nqytkafgyp pltkilasff
      121 gkllgqeidp lknvlvtvga ygalftafqa lvdegdevii iepffdcyep mtlmaggrpv
      181 fvplkpsptq kgepdsssnw qldptelask ftsrtkafil ntpnnplgkv fsreelelva
      241 slcrqydvvc itdevyqwlv fdgfqhisia slpgmwertl tigsagktfs vtgwkvgwvl
      301 gpdslmkhlr tvhqnsiyhc ptqgqaavaq sfereqlhfg qpssyfvqlp qyiqrcrdhm
      361 iqslqsvglr pvipqgsyfl itdisdfknk mpdlpgaade pydkrfvkwm iknkglvaip
      421 vsiffsvphq kffdhyirfc fvkdestlra mdqklqkwka eltp
//
LOCUS       XP_061010448             425 aa            linear   MAM 02-DEC-2023
DEFINITION  kynurenine--oxoglutarate transaminase 1 isoform X2 [Dama dama].
ACCESSION   XP_061010448
VERSION     XP_061010448.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154465.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..425
                     /product="kynurenine--oxoglutarate transaminase 1 isoform
                     X2"
                     /calculated_mol_wt=47947
     Region          7..423
                     /region_name="AspB"
                     /note="Aspartate/methionine/tyrosine aminotransferase
                     [Amino acid transport and metabolism]; COG0436"
                     /db_xref="CDD:440205"
     CDS             1..425
                     /gene="KYAT1"
                     /coded_by="XM_061154465.1:87..1364"
                     /db_xref="GeneID:133064413"
ORIGIN      
        1 makrlqarrl dgidynpwve fvklaseead vvnlgqgfpd fsppefavea fqhavsgdfm
       61 lnqytkafgy ppltkilasf fgkllgqeid plknvlvtvg aygalftafq alvdegdevi
      121 iiepffdcye pmtlmaggrp vfvplkpspt qkgepdsssn wqldptelas kftsrtkafi
      181 lntpnnplgk vfsreelelv aslcrqydvv citdevyqwl vfdgfqhisi aslpgmwert
      241 ltigsagktf svtgwkvgwv lgpdslmkhl rtvhqnsiyh cptqgqaava qsfereqlhf
      301 gqpssyfvql pqyiqrcrdh miqslqsvgl rpvipqgsyf litdisdfkn kmpdlpgaad
      361 epydkrfvkw miknkglvai pvsiffsvph qkffdhyirf cfvkdestlr amdqklqkwk
      421 aeltp
//
LOCUS       XP_061010449             425 aa            linear   MAM 02-DEC-2023
DEFINITION  kynurenine--oxoglutarate transaminase 1 isoform X2 [Dama dama].
ACCESSION   XP_061010449
VERSION     XP_061010449.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154466.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..425
                     /product="kynurenine--oxoglutarate transaminase 1 isoform
                     X2"
                     /calculated_mol_wt=47947
     Region          7..423
                     /region_name="AspB"
                     /note="Aspartate/methionine/tyrosine aminotransferase
                     [Amino acid transport and metabolism]; COG0436"
                     /db_xref="CDD:440205"
     CDS             1..425
                     /gene="KYAT1"
                     /coded_by="XM_061154466.1:316..1593"
                     /db_xref="GeneID:133064413"
ORIGIN      
        1 makrlqarrl dgidynpwve fvklaseead vvnlgqgfpd fsppefavea fqhavsgdfm
       61 lnqytkafgy ppltkilasf fgkllgqeid plknvlvtvg aygalftafq alvdegdevi
      121 iiepffdcye pmtlmaggrp vfvplkpspt qkgepdsssn wqldptelas kftsrtkafi
      181 lntpnnplgk vfsreelelv aslcrqydvv citdevyqwl vfdgfqhisi aslpgmwert
      241 ltigsagktf svtgwkvgwv lgpdslmkhl rtvhqnsiyh cptqgqaava qsfereqlhf
      301 gqpssyfvql pqyiqrcrdh miqslqsvgl rpvipqgsyf litdisdfkn kmpdlpgaad
      361 epydkrfvkw miknkglvai pvsiffsvph qkffdhyirf cfvkdestlr amdqklqkwk
      421 aeltp
//
LOCUS       XP_061010450             425 aa            linear   MAM 02-DEC-2023
DEFINITION  kynurenine--oxoglutarate transaminase 1 isoform X2 [Dama dama].
ACCESSION   XP_061010450
VERSION     XP_061010450.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154467.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..425
                     /product="kynurenine--oxoglutarate transaminase 1 isoform
                     X2"
                     /calculated_mol_wt=47947
     Region          7..423
                     /region_name="AspB"
                     /note="Aspartate/methionine/tyrosine aminotransferase
                     [Amino acid transport and metabolism]; COG0436"
                     /db_xref="CDD:440205"
     CDS             1..425
                     /gene="KYAT1"
                     /coded_by="XM_061154467.1:69..1346"
                     /db_xref="GeneID:133064413"
ORIGIN      
        1 makrlqarrl dgidynpwve fvklaseead vvnlgqgfpd fsppefavea fqhavsgdfm
       61 lnqytkafgy ppltkilasf fgkllgqeid plknvlvtvg aygalftafq alvdegdevi
      121 iiepffdcye pmtlmaggrp vfvplkpspt qkgepdsssn wqldptelas kftsrtkafi
      181 lntpnnplgk vfsreelelv aslcrqydvv citdevyqwl vfdgfqhisi aslpgmwert
      241 ltigsagktf svtgwkvgwv lgpdslmkhl rtvhqnsiyh cptqgqaava qsfereqlhf
      301 gqpssyfvql pqyiqrcrdh miqslqsvgl rpvipqgsyf litdisdfkn kmpdlpgaad
      361 epydkrfvkw miknkglvai pvsiffsvph qkffdhyirf cfvkdestlr amdqklqkwk
      421 aeltp
//
LOCUS       XP_061010451             425 aa            linear   MAM 02-DEC-2023
DEFINITION  kynurenine--oxoglutarate transaminase 1 isoform X2 [Dama dama].
ACCESSION   XP_061010451
VERSION     XP_061010451.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154468.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..425
                     /product="kynurenine--oxoglutarate transaminase 1 isoform
                     X2"
                     /calculated_mol_wt=47947
     Region          7..423
                     /region_name="AspB"
                     /note="Aspartate/methionine/tyrosine aminotransferase
                     [Amino acid transport and metabolism]; COG0436"
                     /db_xref="CDD:440205"
     CDS             1..425
                     /gene="KYAT1"
                     /coded_by="XM_061154468.1:184..1461"
                     /db_xref="GeneID:133064413"
ORIGIN      
        1 makrlqarrl dgidynpwve fvklaseead vvnlgqgfpd fsppefavea fqhavsgdfm
       61 lnqytkafgy ppltkilasf fgkllgqeid plknvlvtvg aygalftafq alvdegdevi
      121 iiepffdcye pmtlmaggrp vfvplkpspt qkgepdsssn wqldptelas kftsrtkafi
      181 lntpnnplgk vfsreelelv aslcrqydvv citdevyqwl vfdgfqhisi aslpgmwert
      241 ltigsagktf svtgwkvgwv lgpdslmkhl rtvhqnsiyh cptqgqaava qsfereqlhf
      301 gqpssyfvql pqyiqrcrdh miqslqsvgl rpvipqgsyf litdisdfkn kmpdlpgaad
      361 epydkrfvkw miknkglvai pvsiffsvph qkffdhyirf cfvkdestlr amdqklqkwk
      421 aeltp
//
LOCUS       XP_061010452             425 aa            linear   MAM 02-DEC-2023
DEFINITION  kynurenine--oxoglutarate transaminase 1 isoform X2 [Dama dama].
ACCESSION   XP_061010452
VERSION     XP_061010452.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154469.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..425
                     /product="kynurenine--oxoglutarate transaminase 1 isoform
                     X2"
                     /calculated_mol_wt=47947
     Region          7..423
                     /region_name="AspB"
                     /note="Aspartate/methionine/tyrosine aminotransferase
                     [Amino acid transport and metabolism]; COG0436"
                     /db_xref="CDD:440205"
     CDS             1..425
                     /gene="KYAT1"
                     /coded_by="XM_061154469.1:159..1436"
                     /db_xref="GeneID:133064413"
ORIGIN      
        1 makrlqarrl dgidynpwve fvklaseead vvnlgqgfpd fsppefavea fqhavsgdfm
       61 lnqytkafgy ppltkilasf fgkllgqeid plknvlvtvg aygalftafq alvdegdevi
      121 iiepffdcye pmtlmaggrp vfvplkpspt qkgepdsssn wqldptelas kftsrtkafi
      181 lntpnnplgk vfsreelelv aslcrqydvv citdevyqwl vfdgfqhisi aslpgmwert
      241 ltigsagktf svtgwkvgwv lgpdslmkhl rtvhqnsiyh cptqgqaava qsfereqlhf
      301 gqpssyfvql pqyiqrcrdh miqslqsvgl rpvipqgsyf litdisdfkn kmpdlpgaad
      361 epydkrfvkw miknkglvai pvsiffsvph qkffdhyirf cfvkdestlr amdqklqkwk
      421 aeltp
//
LOCUS       XP_061010453             377 aa            linear   MAM 02-DEC-2023
DEFINITION  putative methyltransferase C9orf114 homolog isoform X1 [Dama dama].
ACCESSION   XP_061010453
VERSION     XP_061010453.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154470.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..377
                     /product="putative methyltransferase C9orf114 homolog
                     isoform X1"
                     /calculated_mol_wt=41953
     Region          74..365
                     /region_name="Methyltrn_RNA_3"
                     /note="Putative RNA methyltransferase; pfam02598"
                     /db_xref="CDD:460611"
     CDS             1..377
                     /gene="SPOUT1"
                     /coded_by="XM_061154470.1:67..1200"
                     /db_xref="GeneID:133064415"
ORIGIN      
        1 maerarkrpc gpgehgqrve wrkwkqqkke ekkkwkdlkm tkklerqqaq eeqakrqqee
       61 eaaaqsedrg rhytlsvalp gsildnaqsp elrtylagqi aracaifcvd eivvfdeegq
      121 dantvegefr gvgkkgqacv qlarilqyle cpqylrkaff pkhqdlqfag llnpldsphh
      181 mrqdeesefr egvvvdrptr pgqgsfvncg mkkevkidkn lepglrvtvr lnqnqlpesk
      241 tyrgkvvssq dprtkaglyw gytvrlascl savfaeapfq dgydltigts ergsdvasaq
      301 lpnfsrhalv vfgglqglea gvdadpnlev aepsvlfdly vntcpnqgsr tirteeaili
      361 slaalqpglt qagarps
//
LOCUS       XP_061010454             376 aa            linear   MAM 02-DEC-2023
DEFINITION  putative methyltransferase C9orf114 homolog isoform X2 [Dama dama].
ACCESSION   XP_061010454
VERSION     XP_061010454.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154471.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..376
                     /product="putative methyltransferase C9orf114 homolog
                     isoform X2"
                     /calculated_mol_wt=41865
     Region          74..364
                     /region_name="Methyltrn_RNA_3"
                     /note="Putative RNA methyltransferase; pfam02598"
                     /db_xref="CDD:460611"
     CDS             1..376
                     /gene="SPOUT1"
                     /coded_by="XM_061154471.1:67..1197"
                     /db_xref="GeneID:133064415"
ORIGIN      
        1 maerarkrpc gpgehgqrve wrkwkqqkke ekkkwkdlkm tkklerqqaq eeqakrqqee
       61 eaaaqsedrg rhytlsvalp gsildnaqsp elrtylagqi aracaifcvd eivvfdeegq
      121 dantvegefr gvgkkgqacv qlarilqyle cpqylrkaff pkhqdlqfag llnpldsphh
      181 mrqdeesefr egvvvdrptr pgqgsfvncg mkkevkidkn lepglrvtvr lnqnqlpesk
      241 tyrgkvvssq dprtkaglyw gytvrlascl savfaeapfq dgydltigts ergsdvasaq
      301 lpnfrhalvv fgglqgleag vdadpnleva epsvlfdlyv ntcpnqgsrt irteeailis
      361 laalqpgltq agarps
//
LOCUS       XP_061010455             310 aa            linear   MAM 02-DEC-2023
DEFINITION  putative methyltransferase C9orf114 homolog isoform X3 [Dama dama].
ACCESSION   XP_061010455
VERSION     XP_061010455.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154472.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..310
                     /product="putative methyltransferase C9orf114 homolog
                     isoform X3"
                     /calculated_mol_wt=33885
     Region          7..298
                     /region_name="Methyltrn_RNA_3"
                     /note="Putative RNA methyltransferase; pfam02598"
                     /db_xref="CDD:460611"
     CDS             1..310
                     /gene="SPOUT1"
                     /coded_by="XM_061154472.1:228..1160"
                     /db_xref="GeneID:133064415"
ORIGIN      
        1 mswrhytlsv alpgsildna qspelrtyla gqiaracaif cvdeivvfde egqdantveg
       61 efrgvgkkgq acvqlarilq ylecpqylrk affpkhqdlq fagllnplds phhmrqdees
      121 efregvvvdr ptrpgqgsfv ncgmkkevki dknlepglrv tvrlnqnqlp esktyrgkvv
      181 ssqdprtkag lywgytvrla sclsavfaea pfqdgydlti gtsergsdva saqlpnfsrh
      241 alvvfgglqg leagvdadpn levaepsvlf dlyvntcpnq gsrtirteea ilislaalqp
      301 gltqagarps
//
LOCUS       XP_061010456             299 aa            linear   MAM 02-DEC-2023
DEFINITION  endonuclease G, mitochondrial [Dama dama].
ACCESSION   XP_061010456
VERSION     XP_061010456.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154473.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..299
                     /product="endonuclease G, mitochondrial"
                     /calculated_mol_wt=32236
     Region          80..286
                     /region_name="NUC"
                     /note="DNA/RNA non-specific endonuclease; smart00477"
                     /db_xref="CDD:214683"
     Site            order(140..141,143,174,182,186)
                     /site_type="active"
                     /db_xref="CDD:238043"
     Site            order(140..141,186)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238043"
     Site            174
                     /site_type="other"
                     /note="Mg2+ binding site [ion binding]"
                     /db_xref="CDD:238043"
     CDS             1..299
                     /gene="ENDOG"
                     /coded_by="XM_061154473.1:296..1195"
                     /db_xref="GeneID:133064416"
ORIGIN      
        1 mqllragltl algaglgaaa egwrrqwada ratpgllsrl pvlpvaaaag lpavlgtpag
       61 ggpgelakyg lpgvaqlksr asyvlcydpr trgalwvveq lrpeglrgdg drrscdfhed
      121 dsvhayhrat nadyrgsgfd rghlaaaanh rwsqkamddt fylsnvapqv phlnqnawnn
      181 lekysrsltr tyqnvyvctg plflprtead gksyvkyqvi gknhvavpth ffkvlileaa
      241 ggqielrsyv mpnapvdeai plerflvpie sierasgllf vpnilarags lkaitagsk
//
LOCUS       XP_061010457             399 aa            linear   MAM 02-DEC-2023
DEFINITION  TBC1 domain family member 13 isoform X1 [Dama dama].
ACCESSION   XP_061010457
VERSION     XP_061010457.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154474.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..399
                     /product="TBC1 domain family member 13 isoform X1"
                     /calculated_mol_wt=46279
     Region          32..366
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     CDS             1..399
                     /gene="TBC1D13"
                     /coded_by="XM_061154474.1:99..1298"
                     /db_xref="GeneID:133064418"
ORIGIN      
        1 msslhksria dfqdvlkept ialeklrels fsgipceggl rclcwkilln ylpleraswt
       61 silakqrely sqflremiiq pgiakanmgv sredvtfedh plnpnpdsrw ntyfrdnevl
      121 lqidkdvrrl cpdisffqra teypcllild pqnefetlrk rveqttlksq tvarnrsgvt
      181 nmsspqknpa psmneyvvlp ngceahwevv erilfiyakl npgiayvqgm neivgplyyt
      241 fatdpssewr ehaeadtffc ftnlmaeird nfikslddsq cgitykmekv ystlkdkdve
      301 lylklqeqni kpqffafrwl tlllsqefvl pdviriwdsl fadgnrfdfl llvccamlil
      361 ireqllegdf tinmrllqdy pitdvcqvlq kakelqdsq
//
LOCUS       XP_061010458             378 aa            linear   MAM 02-DEC-2023
DEFINITION  TBC1 domain family member 13 isoform X2 [Dama dama].
ACCESSION   XP_061010458
VERSION     XP_061010458.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154475.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..378
                     /product="TBC1 domain family member 13 isoform X2"
                     /calculated_mol_wt=43689
     Region          32..345
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     CDS             1..378
                     /gene="TBC1D13"
                     /coded_by="XM_061154475.1:99..1235"
                     /db_xref="GeneID:133064418"
ORIGIN      
        1 msslhksria dfqdvlkept ialeklrels fsgipceggl rclcwkilln ylpleraswt
       61 silakqrely sqflremiiq pgiakanmgv sredvtfedh plnpnpdsrw ntyfrdnevl
      121 lqidkdvrrl cpdisffqra teypcllild pqnefetlrk rveqttlksq tvarnrsgvt
      181 nmsspqknpa psmneyvvlp ngceahwevv erilfiyakl npgiayvqgm neivgplyyt
      241 fatdpssewr ehaeadtffc ftnlmaeird nfikslddsq cgitykmekv ystlkdkdve
      301 lylklefvlp dviriwdslf adgnrfdfll lvccamlili reqllegdft inmrllqdyp
      361 itdvcqvlqk akelqdsq
//
LOCUS       XP_061010459             323 aa            linear   MAM 02-DEC-2023
DEFINITION  TBC1 domain family member 13 isoform X3 [Dama dama].
ACCESSION   XP_061010459
VERSION     XP_061010459.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154476.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..323
                     /product="TBC1 domain family member 13 isoform X3"
                     /calculated_mol_wt=37456
     Region          28..290
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     CDS             1..323
                     /gene="TBC1D13"
                     /coded_by="XM_061154476.1:219..1190"
                     /db_xref="GeneID:133064418"
ORIGIN      
        1 miiqpgiaka nmgvsredvt fedhplnpnp dsrwntyfrd nevllqidkd vrrlcpdisf
       61 fqrateypcl lildpqnefe tlrkrveqtt lksqtvarnr sgvtnmsspq knpapsmney
      121 vvlpngceah wevverilfi yaklnpgiay vqgmneivgp lyytfatdps sewrehaead
      181 tffcftnlma eirdnfiksl ddsqcgityk mekvystlkd kdvelylklq eqnikpqffa
      241 frwltlllsq efvlpdviri wdslfadgnr fdflllvcca mlilireqll egdftinmrl
      301 lqdypitdvc qvlqkakelq dsq
//
LOCUS       XP_061010460             766 aa            linear   MAM 02-DEC-2023
DEFINITION  protein zer-1 homolog isoform X1 [Dama dama].
ACCESSION   XP_061010460
VERSION     XP_061010460.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154477.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..766
                     /product="protein zer-1 homolog isoform X1"
                     /calculated_mol_wt=87785
     Region          82..104
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          105..130
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          131..161
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          <171..>288
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          177..200
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          201..223
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          224..247
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          281..306
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..766
                     /gene="ZER1"
                     /coded_by="XM_061154477.1:418..2718"
                     /db_xref="GeneID:133064419"
ORIGIN      
        1 masdtpeslm alctdfclrn ldgtlgylld ketlrlhpdi flpseicdrl vneyvelvna
       61 acsfephesf fslfsdprst rltrihlred lvqdqdleai rkqdlvelyl tnceklsaks
      121 lqtlrsfsht lvslslfgca nifyeeenpg gcedeclvnp tcqvlvkdft fegftrlrfl
      181 nlgrmidgvp vesllrplns laaldlsgiq tsdaafltqw kdslvslvly nmdlsddhir
      241 vivqlhklrh ldisrdrlss yykfkltrkv lslfvqklgn lmsldisghm ilencsiskm
      301 deeagqtsie pskssimpfr alkrplqflg lfetslcrlt hipaykvsgd kneeqvlnai
      361 eaytehrpei tsrainllfd iariercnql lralklvita lkchkydkni qvtgsaalfy
      421 ltnseyrseq svklrrqviq vvlngmesyq evtvqrnccl tlcnfsipee lefqyrrvne
      481 lllsilnptr qdesiqriav hlcnalvcqv dndhkeavgk mgfvvtmlkl iqkklldkic
      541 dqvmefswsa lwnitdetpd ncemflnfng mklfldclke fpekqelhrn mlgllgnvae
      601 vkelrpqlmt sqfisvfsnl leskadgiev synacgvlsh imfdgpeawg icepqreeve
      661 ermwaaiqsw dinsrrniny rsfepilrll pqgispvsqh watwalynlv svypdkycpl
      721 likeggmpll kdmikmatar qetkemarkv iehcsnfkee nmdtsr
//
LOCUS       XP_061010462             766 aa            linear   MAM 02-DEC-2023
DEFINITION  protein zer-1 homolog isoform X1 [Dama dama].
ACCESSION   XP_061010462
VERSION     XP_061010462.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154479.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..766
                     /product="protein zer-1 homolog isoform X1"
                     /calculated_mol_wt=87785
     Region          82..104
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          105..130
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          131..161
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          <171..>288
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          177..200
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          201..223
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          224..247
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          281..306
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..766
                     /gene="ZER1"
                     /coded_by="XM_061154479.1:625..2925"
                     /db_xref="GeneID:133064419"
ORIGIN      
        1 masdtpeslm alctdfclrn ldgtlgylld ketlrlhpdi flpseicdrl vneyvelvna
       61 acsfephesf fslfsdprst rltrihlred lvqdqdleai rkqdlvelyl tnceklsaks
      121 lqtlrsfsht lvslslfgca nifyeeenpg gcedeclvnp tcqvlvkdft fegftrlrfl
      181 nlgrmidgvp vesllrplns laaldlsgiq tsdaafltqw kdslvslvly nmdlsddhir
      241 vivqlhklrh ldisrdrlss yykfkltrkv lslfvqklgn lmsldisghm ilencsiskm
      301 deeagqtsie pskssimpfr alkrplqflg lfetslcrlt hipaykvsgd kneeqvlnai
      361 eaytehrpei tsrainllfd iariercnql lralklvita lkchkydkni qvtgsaalfy
      421 ltnseyrseq svklrrqviq vvlngmesyq evtvqrnccl tlcnfsipee lefqyrrvne
      481 lllsilnptr qdesiqriav hlcnalvcqv dndhkeavgk mgfvvtmlkl iqkklldkic
      541 dqvmefswsa lwnitdetpd ncemflnfng mklfldclke fpekqelhrn mlgllgnvae
      601 vkelrpqlmt sqfisvfsnl leskadgiev synacgvlsh imfdgpeawg icepqreeve
      661 ermwaaiqsw dinsrrniny rsfepilrll pqgispvsqh watwalynlv svypdkycpl
      721 likeggmpll kdmikmatar qetkemarkv iehcsnfkee nmdtsr
//
LOCUS       XP_061010463             766 aa            linear   MAM 02-DEC-2023
DEFINITION  protein zer-1 homolog isoform X1 [Dama dama].
ACCESSION   XP_061010463
VERSION     XP_061010463.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154480.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..766
                     /product="protein zer-1 homolog isoform X1"
                     /calculated_mol_wt=87785
     Region          82..104
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          105..130
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          131..161
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          <171..>288
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          177..200
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          201..223
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          224..247
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          281..306
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..766
                     /gene="ZER1"
                     /coded_by="XM_061154480.1:522..2822"
                     /db_xref="GeneID:133064419"
ORIGIN      
        1 masdtpeslm alctdfclrn ldgtlgylld ketlrlhpdi flpseicdrl vneyvelvna
       61 acsfephesf fslfsdprst rltrihlred lvqdqdleai rkqdlvelyl tnceklsaks
      121 lqtlrsfsht lvslslfgca nifyeeenpg gcedeclvnp tcqvlvkdft fegftrlrfl
      181 nlgrmidgvp vesllrplns laaldlsgiq tsdaafltqw kdslvslvly nmdlsddhir
      241 vivqlhklrh ldisrdrlss yykfkltrkv lslfvqklgn lmsldisghm ilencsiskm
      301 deeagqtsie pskssimpfr alkrplqflg lfetslcrlt hipaykvsgd kneeqvlnai
      361 eaytehrpei tsrainllfd iariercnql lralklvita lkchkydkni qvtgsaalfy
      421 ltnseyrseq svklrrqviq vvlngmesyq evtvqrnccl tlcnfsipee lefqyrrvne
      481 lllsilnptr qdesiqriav hlcnalvcqv dndhkeavgk mgfvvtmlkl iqkklldkic
      541 dqvmefswsa lwnitdetpd ncemflnfng mklfldclke fpekqelhrn mlgllgnvae
      601 vkelrpqlmt sqfisvfsnl leskadgiev synacgvlsh imfdgpeawg icepqreeve
      661 ermwaaiqsw dinsrrniny rsfepilrll pqgispvsqh watwalynlv svypdkycpl
      721 likeggmpll kdmikmatar qetkemarkv iehcsnfkee nmdtsr
//
LOCUS       XP_061010464             764 aa            linear   MAM 02-DEC-2023
DEFINITION  protein zer-1 homolog isoform X2 [Dama dama].
ACCESSION   XP_061010464
VERSION     XP_061010464.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154481.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..764
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..764
                     /product="protein zer-1 homolog isoform X2"
                     /calculated_mol_wt=87585
     Region          82..104
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          105..130
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          131..161
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          <171..>288
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          177..200
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          201..223
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          224..247
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          281..306
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..764
                     /gene="ZER1"
                     /coded_by="XM_061154481.1:423..2717"
                     /db_xref="GeneID:133064419"
ORIGIN      
        1 masdtpeslm alctdfclrn ldgtlgylld ketlrlhpdi flpseicdrl vneyvelvna
       61 acsfephesf fslfsdprst rltrihlred lvqdqdleai rkqdlvelyl tnceklsaks
      121 lqtlrsfsht lvslslfgca nifyeeenpg gcedeclvnp tcqvlvkdft fegftrlrfl
      181 nlgrmidgvp vesllrplns laaldlsgiq tsdaafltqw kdslvslvly nmdlsddhir
      241 vivqlhklrh ldisrdrlss yykfkltrkv lslfvqklgn lmsldisghm ilencsiskm
      301 deeagqtsie pskssimpfr alkrplqflg lfetslcrlt hipaykvsgd kneeqvlnai
      361 eaytehrpei tsrainllfd iariercnql lralklvita lkchkydkni qvtgsaalfy
      421 ltnseyrseq svklrrqviq vvlngmesyq evqrnccltl cnfsipeele fqyrrvnell
      481 lsilnptrqd esiqriavhl cnalvcqvdn dhkeavgkmg fvvtmlkliq kklldkicdq
      541 vmefswsalw nitdetpdnc emflnfngmk lfldclkefp ekqelhrnml gllgnvaevk
      601 elrpqlmtsq fisvfsnlle skadgievsy nacgvlshim fdgpeawgic epqreeveer
      661 mwaaiqswdi nsrrninyrs fepilrllpq gispvsqhwa twalynlvsv ypdkycplli
      721 keggmpllkd mikmatarqe tkemarkvie hcsnfkeenm dtsr
//
LOCUS       XP_061010465             899 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase N3 isoform X1 [Dama dama].
ACCESSION   XP_061010465
VERSION     XP_061010465.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154482.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..899
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..899
                     /product="serine/threonine-protein kinase N3 isoform X1"
                     /calculated_mol_wt=100197
     Region          25..88
                     /region_name="HR1_PKN_1"
                     /note="First Protein kinase C-related kinase homology
                     region 1 (HR1) Rho-binding domain of Protein Kinase N;
                     cd11622"
                     /db_xref="CDD:212012"
     Site            order(31,34,37..38,41..42,44..45,48..49,51..52,67..68,71,
                     74..75,78)
                     /site_type="other"
                     /note="Rho binding site 1 [polypeptide binding]"
                     /db_xref="CDD:212012"
     Site            order(39..40,42..43,46..47,49..50,53..54,57,62..63,65)
                     /site_type="other"
                     /note="putative Rho binding site 2 [polypeptide binding]"
                     /db_xref="CDD:212012"
     Region          107..180
                     /region_name="HR1"
                     /note="Protein kinase C-related kinase homology region 1
                     (HR1) domain that binds Rho family small GTPases; cl00087"
                     /db_xref="CDD:469609"
     Site            order(118,121,124..125,128..129,131..132,135..136,
                     138..139,159..160,163,166..167,170)
                     /site_type="other"
                     /note="Rho binding site 1 [polypeptide binding]"
                     /db_xref="CDD:212008"
     Site            order(126..127,129..130,133..134,136..137,140..141,
                     154..155,157)
                     /site_type="other"
                     /note="putative Rho binding site 2 [polypeptide binding]"
                     /db_xref="CDD:212008"
     Region          180..240
                     /region_name="HR1_PKN3_3"
                     /note="Third Protein kinase C-related kinase homology
                     region 1 (HR1) Rho-binding domain of Protein Kinase N3;
                     cd11637"
                     /db_xref="CDD:212027"
     Site            order(191,194,197..198,201..202,204..205,208..209,
                     211..212,232..233,236,239..240)
                     /site_type="other"
                     /note="putative Rho binding site 1 [polypeptide binding]"
                     /db_xref="CDD:212027"
     Site            order(199..200,202..203,206..207,209..210,213..214,
                     227..228,230)
                     /site_type="other"
                     /note="putative Rho binding site 2 [polypeptide binding]"
                     /db_xref="CDD:212027"
     Region          338..420
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     Region          <470..567
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          569..894
                     /region_name="STKc_PKN"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Protein Kinase N; cd05589"
                     /db_xref="CDD:270741"
     Site            order(575..579,583,596,598,633,649..650,652,656,658,694,
                     696,698..699,701,711..712,715,729..734,761,767,770)
                     /site_type="active"
                     /db_xref="CDD:270741"
     Site            order(575..579,583,596,598,633,650..652,656,694,696,
                     698..699,701,711..712)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270741"
     Site            order(579,656,658,694,696,698,715,729..734,761,767,770)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270741"
     Site            711..734
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270741"
     Site            870
                     /site_type="other"
                     /note="turn motif phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:270741"
     Site            886..891
                     /site_type="other"
                     /note="hydrophobic motif (HM)"
                     /db_xref="CDD:270741"
     CDS             1..899
                     /gene="PKN3"
                     /coded_by="XM_061154482.1:66..2765"
                     /db_xref="GeneID:133064421"
ORIGIN      
        1 mgtsvykigp qtpsgkgepg aghrpledek evirraiqke lkikegvenl rrvatdrrhl
       61 ghvqqllrss nrrleqlhge lrelharill pgpgpgpaep aaseprplae qararhleal
      121 qrqlqvelkv rqgaenmtht yasgtpkerk llaaaqqmlq dsqlkvallr mkissleasg
      181 spepgpelmv eelrhrlrie aavaegaknv vkllgsrrtq drkvlaeaqa qlqescqkld
      241 llrlaleqll erlppahplr grvarelrta asgnpqpsgt lvkptamtgt lqvrllgceq
      301 lltavpgrsp aaalagspsq gwlrsrakqq rgggelasev lavlkvdnrv vgqtgwgpva
      361 kqswdqtfvi alerarelei gvhwrdwrql cgvaflrled fldnachqls lslvpqgllf
      421 aqvtfcdpvi errprlqrqk rifskrrgqd flrasqmnls maawgrlvms llppcsspst
      481 isppkacsqt patpqratdp dspsnfppkk tplreeiqpl pkpprlylaq eptpeemprt
      541 krphmeprir lepplpapat rkpprlqdfr clavlgrghf gkvllvqfkg tgqyyaikal
      601 kkqevlsrde ieslycekri leavgctghp fllpllacfq tsshacfvte fapggdlmmq
      661 ihedvfpepq arfylacvvl glqflheqki iyrdlkldnl lldaqgflki adfglckegi
      721 gfgdrtstfc gtpeflapev ltqeaytrav dwwglgvlly emlvgecpfp gdteeevfdc
      781 ivnaeapypr flsvqgveli qkllqkcpek rlgagerdae eiktqpffrt tdwqallara
      841 vqppfvptlc gptdlryfeg eftglppalt ppdprsplta rqqaafrdfd fvserflep
//
LOCUS       XP_061010466             889 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase N3 isoform X2 [Dama dama].
ACCESSION   XP_061010466
VERSION     XP_061010466.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154483.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..889
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..889
                     /product="serine/threonine-protein kinase N3 isoform X2"
                     /calculated_mol_wt=99249
     Region          15..78
                     /region_name="HR1_PKN_1"
                     /note="First Protein kinase C-related kinase homology
                     region 1 (HR1) Rho-binding domain of Protein Kinase N;
                     cd11622"
                     /db_xref="CDD:212012"
     Site            order(21,24,27..28,31..32,34..35,38..39,41..42,57..58,61,
                     64..65,68)
                     /site_type="other"
                     /note="Rho binding site 1 [polypeptide binding]"
                     /db_xref="CDD:212012"
     Site            order(29..30,32..33,36..37,39..40,43..44,47,52..53,55)
                     /site_type="other"
                     /note="putative Rho binding site 2 [polypeptide binding]"
                     /db_xref="CDD:212012"
     Region          97..170
                     /region_name="HR1"
                     /note="Protein kinase C-related kinase homology region 1
                     (HR1) domain that binds Rho family small GTPases; cl00087"
                     /db_xref="CDD:469609"
     Site            order(108,111,114..115,118..119,121..122,125..126,
                     128..129,149..150,153,156..157,160)
                     /site_type="other"
                     /note="Rho binding site 1 [polypeptide binding]"
                     /db_xref="CDD:212008"
     Site            order(116..117,119..120,123..124,126..127,130..131,
                     144..145,147)
                     /site_type="other"
                     /note="putative Rho binding site 2 [polypeptide binding]"
                     /db_xref="CDD:212008"
     Region          170..230
                     /region_name="HR1"
                     /note="Protein kinase C-related kinase homology region 1
                     (HR1) domain that binds Rho family small GTPases; cl00087"
                     /db_xref="CDD:469609"
     Site            order(181,184,187..188,191..192,194..195,198..199,
                     201..202,222..223,226,229..230)
                     /site_type="other"
                     /note="Rho binding site 1 [polypeptide binding]"
                     /db_xref="CDD:212008"
     Site            order(189..190,192..193,196..197,199..200,203..204,
                     217..218,220)
                     /site_type="other"
                     /note="putative Rho binding site 2 [polypeptide binding]"
                     /db_xref="CDD:212008"
     Region          328..410
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     Region          <460..557
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          559..884
                     /region_name="STKc_PKN"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Protein Kinase N; cd05589"
                     /db_xref="CDD:270741"
     Site            order(565..569,573,586,588,623,639..640,642,646,648,684,
                     686,688..689,691,701..702,705,719..724,751,757,760)
                     /site_type="active"
                     /db_xref="CDD:270741"
     Site            order(565..569,573,586,588,623,640..642,646,684,686,
                     688..689,691,701..702)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270741"
     Site            order(569,646,648,684,686,688,705,719..724,751,757,760)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270741"
     Site            701..724
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270741"
     Site            860
                     /site_type="other"
                     /note="turn motif phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:270741"
     Site            876..881
                     /site_type="other"
                     /note="hydrophobic motif (HM)"
                     /db_xref="CDD:270741"
     CDS             1..889
                     /gene="PKN3"
                     /coded_by="XM_061154483.1:299..2968"
                     /db_xref="GeneID:133064421"
ORIGIN      
        1 meegaqpqpg aghrpledek evirraiqke lkikegvenl rrvatdrrhl ghvqqllrss
       61 nrrleqlhge lrelharill pgpgpgpaep aaseprplae qararhleal qrqlqvelkv
      121 rqgaenmtht yasgtpkerk llaaaqqmlq dsqlkvallr mkissleasg spepgpelmv
      181 eelrhrlrie aavaegaknv vkllgsrrtq drkvlaeaqa qlqescqkld llrlaleqll
      241 erlppahplr grvarelrta asgnpqpsgt lvkptamtgt lqvrllgceq lltavpgrsp
      301 aaalagspsq gwlrsrakqq rgggelasev lavlkvdnrv vgqtgwgpva kqswdqtfvi
      361 alerarelei gvhwrdwrql cgvaflrled fldnachqls lslvpqgllf aqvtfcdpvi
      421 errprlqrqk rifskrrgqd flrasqmnls maawgrlvms llppcsspst isppkacsqt
      481 patpqratdp dspsnfppkk tplreeiqpl pkpprlylaq eptpeemprt krphmeprir
      541 lepplpapat rkpprlqdfr clavlgrghf gkvllvqfkg tgqyyaikal kkqevlsrde
      601 ieslycekri leavgctghp fllpllacfq tsshacfvte fapggdlmmq ihedvfpepq
      661 arfylacvvl glqflheqki iyrdlkldnl lldaqgflki adfglckegi gfgdrtstfc
      721 gtpeflapev ltqeaytrav dwwglgvlly emlvgecpfp gdteeevfdc ivnaeapypr
      781 flsvqgveli qkllqkcpek rlgagerdae eiktqpffrt tdwqallara vqppfvptlc
      841 gptdlryfeg eftglppalt ppdprsplta rqqaafrdfd fvserflep
//
LOCUS       XP_061010467             886 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase N3 isoform X3 [Dama dama].
ACCESSION   XP_061010467
VERSION     XP_061010467.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154484.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..886
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..886
                     /product="serine/threonine-protein kinase N3 isoform X3"
                     /calculated_mol_wt=98981
     Region          12..75
                     /region_name="HR1_PKN_1"
                     /note="First Protein kinase C-related kinase homology
                     region 1 (HR1) Rho-binding domain of Protein Kinase N;
                     cd11622"
                     /db_xref="CDD:212012"
     Site            order(18,21,24..25,28..29,31..32,35..36,38..39,54..55,58,
                     61..62,65)
                     /site_type="other"
                     /note="Rho binding site 1 [polypeptide binding]"
                     /db_xref="CDD:212012"
     Site            order(26..27,29..30,33..34,36..37,40..41,44,49..50,52)
                     /site_type="other"
                     /note="putative Rho binding site 2 [polypeptide binding]"
                     /db_xref="CDD:212012"
     Region          94..167
                     /region_name="HR1"
                     /note="Protein kinase C-related kinase homology region 1
                     (HR1) domain that binds Rho family small GTPases; cl00087"
                     /db_xref="CDD:469609"
     Site            order(105,108,111..112,115..116,118..119,122..123,
                     125..126,146..147,150,153..154,157)
                     /site_type="other"
                     /note="Rho binding site 1 [polypeptide binding]"
                     /db_xref="CDD:212008"
     Site            order(113..114,116..117,120..121,123..124,127..128,
                     141..142,144)
                     /site_type="other"
                     /note="putative Rho binding site 2 [polypeptide binding]"
                     /db_xref="CDD:212008"
     Region          167..227
                     /region_name="HR1"
                     /note="Protein kinase C-related kinase homology region 1
                     (HR1) domain that binds Rho family small GTPases; cl00087"
                     /db_xref="CDD:469609"
     Site            order(178,181,184..185,188..189,191..192,195..196,
                     198..199,219..220,223,226..227)
                     /site_type="other"
                     /note="Rho binding site 1 [polypeptide binding]"
                     /db_xref="CDD:212008"
     Site            order(186..187,189..190,193..194,196..197,200..201,
                     214..215,217)
                     /site_type="other"
                     /note="putative Rho binding site 2 [polypeptide binding]"
                     /db_xref="CDD:212008"
     Region          325..407
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     Region          <457..554
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          556..881
                     /region_name="STKc_PKN"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Protein Kinase N; cd05589"
                     /db_xref="CDD:270741"
     Site            order(562..566,570,583,585,620,636..637,639,643,645,681,
                     683,685..686,688,698..699,702,716..721,748,754,757)
                     /site_type="active"
                     /db_xref="CDD:270741"
     Site            order(562..566,570,583,585,620,637..639,643,681,683,
                     685..686,688,698..699)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270741"
     Site            order(566,643,645,681,683,685,702,716..721,748,754,757)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270741"
     Site            698..721
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270741"
     Site            857
                     /site_type="other"
                     /note="turn motif phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:270741"
     Site            873..878
                     /site_type="other"
                     /note="hydrophobic motif (HM)"
                     /db_xref="CDD:270741"
     CDS             1..886
                     /gene="PKN3"
                     /coded_by="XM_061154484.1:299..2959"
                     /db_xref="GeneID:133064421"
ORIGIN      
        1 mergepgagh rpledekevi rraiqkelki kegvenlrrv atdrrhlghv qqllrssnrr
       61 leqlhgelre lharillpgp gpgpaepaas eprplaeqar arhlealqrq lqvelkvrqg
      121 aenmthtyas gtpkerklla aaqqmlqdsq lkvallrmki ssleasgspe pgpelmveel
      181 rhrlrieaav aegaknvvkl lgsrrtqdrk vlaeaqaqlq escqkldllr laleqllerl
      241 ppahplrgrv arelrtaasg npqpsgtlvk ptamtgtlqv rllgceqllt avpgrspaaa
      301 lagspsqgwl rsrakqqrgg gelasevlav lkvdnrvvgq tgwgpvakqs wdqtfviale
      361 rareleigvh wrdwrqlcgv aflrledfld nachqlslsl vpqgllfaqv tfcdpvierr
      421 prlqrqkrif skrrgqdflr asqmnlsmaa wgrlvmsllp pcsspstisp pkacsqtpat
      481 pqratdpdsp snfppkktpl reeiqplpkp prlylaqept peemprtkrp hmeprirlep
      541 plpapatrkp prlqdfrcla vlgrghfgkv llvqfkgtgq yyaikalkkq evlsrdeies
      601 lycekrilea vgctghpfll pllacfqtss hacfvtefap ggdlmmqihe dvfpepqarf
      661 ylacvvlglq flheqkiiyr dlkldnllld aqgflkiadf glckegigfg drtstfcgtp
      721 eflapevltq eaytravdww glgvllyeml vgecpfpgdt eeevfdcivn aeapyprfls
      781 vqgveliqkl lqkcpekrlg agerdaeeik tqpffrttdw qallaravqp pfvptlcgpt
      841 dlryfegeft glppaltppd prspltarqq aafrdfdfvs erflep
//
LOCUS       XP_061010468             773 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase N3 isoform X4 [Dama dama].
ACCESSION   XP_061010468
VERSION     XP_061010468.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154485.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..773
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..773
                     /product="serine/threonine-protein kinase N3 isoform X4"
                     /calculated_mol_wt=86003
     Region          <22..54
                     /region_name="HR1"
                     /note="Protein kinase C-related kinase homology region 1
                     (HR1) domain that binds Rho family small GTPases; cl00087"
                     /db_xref="CDD:469609"
     Region          54..114
                     /region_name="HR1_PKN3_3"
                     /note="Third Protein kinase C-related kinase homology
                     region 1 (HR1) Rho-binding domain of Protein Kinase N3;
                     cd11637"
                     /db_xref="CDD:212027"
     Site            order(65,68,71..72,75..76,78..79,82..83,85..86,106..107,
                     110,113..114)
                     /site_type="other"
                     /note="putative Rho binding site 1 [polypeptide binding]"
                     /db_xref="CDD:212027"
     Site            order(73..74,76..77,80..81,83..84,87..88,101..102,104)
                     /site_type="other"
                     /note="putative Rho binding site 2 [polypeptide binding]"
                     /db_xref="CDD:212027"
     Region          212..294
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     Region          <344..441
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          443..768
                     /region_name="STKc_PKN"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Protein Kinase N; cd05589"
                     /db_xref="CDD:270741"
     Site            order(449..453,457,470,472,507,523..524,526,530,532,568,
                     570,572..573,575,585..586,589,603..608,635,641,644)
                     /site_type="active"
                     /db_xref="CDD:270741"
     Site            order(449..453,457,470,472,507,524..526,530,568,570,
                     572..573,575,585..586)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270741"
     Site            order(453,530,532,568,570,572,589,603..608,635,641,644)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270741"
     Site            585..608
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270741"
     Site            744
                     /site_type="other"
                     /note="turn motif phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:270741"
     Site            760..765
                     /site_type="other"
                     /note="hydrophobic motif (HM)"
                     /db_xref="CDD:270741"
     CDS             1..773
                     /gene="PKN3"
                     /coded_by="XM_061154485.1:601..2922"
                     /db_xref="GeneID:133064421"
ORIGIN      
        1 mescgsfmpa sccpglgrar lerkllaaaq qmlqdsqlkv allrmkissl easgspepgp
       61 elmveelrhr lrieaavaeg aknvvkllgs rrtqdrkvla eaqaqlqesc qkldllrlal
      121 eqllerlppa hplrgrvare lrtaasgnpq psgtlvkpta mtgtlqvrll gceqlltavp
      181 grspaaalag spsqgwlrsr akqqrgggel asevlavlkv dnrvvgqtgw gpvakqswdq
      241 tfvialerar eleigvhwrd wrqlcgvafl rledfldnac hqlslslvpq gllfaqvtfc
      301 dpvierrprl qrqkrifskr rgqdflrasq mnlsmaawgr lvmsllppcs spstisppka
      361 csqtpatpqr atdpdspsnf ppkktplree iqplpkpprl ylaqeptpee mprtkrphme
      421 prirlepplp apatrkpprl qdfrclavlg rghfgkvllv qfkgtgqyya ikalkkqevl
      481 srdeieslyc ekrileavgc tghpfllpll acfqtsshac fvtefapggd lmmqihedvf
      541 pepqarfyla cvvlglqflh eqkiiyrdlk ldnllldaqg flkiadfglc kegigfgdrt
      601 stfcgtpefl apevltqeay travdwwglg vllyemlvge cpfpgdteee vfdcivnaea
      661 pyprflsvqg veliqkllqk cpekrlgage rdaeeiktqp ffrttdwqal laravqppfv
      721 ptlcgptdlr yfegeftglp paltppdprs pltarqqaaf rdfdfvserf lep
//
LOCUS       XP_061010469             268 aa            linear   MAM 02-DEC-2023
DEFINITION  palmitoyltransferase ZDHHC12 isoform X1 [Dama dama].
ACCESSION   XP_061010469
VERSION     XP_061010469.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154486.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..268
                     /product="palmitoyltransferase ZDHHC12 isoform X1"
                     /calculated_mol_wt=30590
     Region          <123..217
                     /region_name="DHHC"
                     /note="DHHC palmitoyltransferase; pfam01529"
                     /db_xref="CDD:396215"
     CDS             1..268
                     /gene="ZDHHC12"
                     /coded_by="XM_061154486.1:42..848"
                     /db_xref="GeneID:133064422"
ORIGIN      
        1 mapwalltpg vlvrtghtvl twgitlvlfl hdtalrqwee qgelllpltf lllvlgslll
       61 yltvslmdpg yvnvlpqpqe eakeeqtamv pqaislrrcg ycmvlqplra rhcrecrrcv
      121 rrydhhcpwm encvgernhp lfvaylalql vvllwalyla wsglrffqpw glwlrssgll
      181 fatflllslf slvaglllas hlylvasntt twefisshri aylrqrpgnp fdrgltrnla
      241 hffcgwppgs wetlwaedee eegssqav
//
LOCUS       XP_061010470             227 aa            linear   MAM 02-DEC-2023
DEFINITION  palmitoyltransferase ZDHHC12 isoform X2 [Dama dama].
ACCESSION   XP_061010470
VERSION     XP_061010470.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154487.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..227
                     /product="palmitoyltransferase ZDHHC12 isoform X2"
                     /calculated_mol_wt=24860
     Region          <123..>159
                     /region_name="DHHC"
                     /note="DHHC palmitoyltransferase; cl19890"
                     /db_xref="CDD:418707"
     CDS             1..227
                     /gene="ZDHHC12"
                     /coded_by="XM_061154487.1:42..725"
                     /db_xref="GeneID:133064422"
ORIGIN      
        1 mapwalltpg vlvrtghtvl twgitlvlfl hdtalrqwee qgelllpltf lllvlgslll
       61 yltvslmdpg yvnvlpqpqe eakeeqtamv pqaislrrcg ycmvlqplra rhcrecrrcv
      121 rrydhhcpwm encvgernhp lfvaylalql vvllwalyla cpggsgcgpa gscsppsccc
      181 rsspwwpacs wprtsiwwpa trppgssspp tasptsasap atpstaa
//
LOCUS       XP_061010471             315 aa            linear   MAM 02-DEC-2023
DEFINITION  protein SET isoform X1 [Dama dama].
ACCESSION   XP_061010471
VERSION     XP_061010471.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154488.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..315
                     /product="protein SET isoform X1"
                     /calculated_mol_wt=36193
     Region          32..221
                     /region_name="NAP"
                     /note="Nucleosome assembly protein (NAP); pfam00956"
                     /db_xref="CDD:460010"
     CDS             1..315
                     /gene="SET"
                     /coded_by="XM_061154488.1:245..1192"
                     /db_xref="GeneID:133064423"
ORIGIN      
        1 msapaakvsk kelnsnhdga detsekeqqe aiehidevqn eidrlneqas eeilkveqky
       61 nklrqpffqk rseliakipn fwvttfvnhp qvsallgeed eealhyltrv evtefediks
      121 gyridfyfde npyfenkils kefhlnesgd pssksteikw ksgkdltkrs sqtqnkasrk
      181 rqheepesff twftdhsdag adelgevikd diwpnplqyy lvpdmddeeg egeeddddde
      241 eeegledide egdedegeed edddegeege iqptadvvll ivesskkqnl nllsvgnylr
      301 cihnylqcni ttnlg
//
LOCUS       XP_061010472             277 aa            linear   MAM 02-DEC-2023
DEFINITION  protein SET isoform X2 [Dama dama].
ACCESSION   XP_061010472
VERSION     XP_061010472.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154489.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..277
                     /product="protein SET isoform X2"
                     /calculated_mol_wt=31986
     Region          32..221
                     /region_name="NAP"
                     /note="Nucleosome assembly protein (NAP); pfam00956"
                     /db_xref="CDD:460010"
     CDS             1..277
                     /gene="SET"
                     /coded_by="XM_061154489.1:238..1071"
                     /db_xref="GeneID:133064423"
ORIGIN      
        1 msapaakvsk kelnsnhdga detsekeqqe aiehidevqn eidrlneqas eeilkveqky
       61 nklrqpffqk rseliakipn fwvttfvnhp qvsallgeed eealhyltrv evtefediks
      121 gyridfyfde npyfenkils kefhlnesgd pssksteikw ksgkdltkrs sqtqnkasrk
      181 rqheepesff twftdhsdag adelgevikd diwpnplqyy lvpdmddeeg egeeddddde
      241 eeegledide egdedegeed edddegeege edegedd
//
LOCUS       XP_061010474            2477 aa            linear   MAM 02-DEC-2023
DEFINITION  spectrin alpha chain, non-erythrocytic 1 isoform X1 [Dama dama].
ACCESSION   XP_061010474
VERSION     XP_061010474.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154491.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2477
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2477
                     /product="spectrin alpha chain, non-erythrocytic 1 isoform
                     X1"
                     /calculated_mol_wt=285050
     Site            43..48
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          44..147
                     /region_name="Spectrin"
                     /note="Spectrin repeat; pfam00435"
                     /db_xref="CDD:395348"
     Region          150..361
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            254..259
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          362..572
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            466..471
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          468..678
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            572..577
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          679..890
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            783..788
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          890..>958
                     /region_name="Spectrin"
                     /note="Spectrin repeat; pfam00435"
                     /db_xref="CDD:395348"
     Region          971..1023
                     /region_name="SH3_Alpha_Spectrin"
                     /note="Src homology 3 domain of Alpha Spectrin; cd11808"
                     /db_xref="CDD:212742"
     Site            order(976,978,981,1003..1004,1017,1019..1020)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212742"
     Region          1092..1339
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1232..1237
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1234..1445
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1338..1343
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1446..1663
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1550..1555
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1663..1767
                     /region_name="Spectrin"
                     /note="Spectrin repeat; pfam00435"
                     /db_xref="CDD:395348"
     Region          1770..1979
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1874..1879
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1876..2087
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1980..1985
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1983..2201
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            2087..2092
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          2101..2317
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            2201..2206
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          2332..2400
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cd00051"
                     /db_xref="CDD:238008"
     Site            order(2341,2343,2345,2352,2384,2386,2388,2395)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238008"
     Region          2407..2475
                     /region_name="EFhand_Ca_insen"
                     /note="Ca2+ insensitive EF hand; pfam08726"
                     /db_xref="CDD:430177"
     CDS             1..2477
                     /gene="SPTAN1"
                     /coded_by="XM_061154491.1:129..7562"
                     /db_xref="GeneID:133064426"
ORIGIN      
        1 mdpsgvkvle taediqerrq qvldryhrfk elstlrrqkl edsyrfqffq rdaeelekwi
       61 qeklqiasde nykdptnlqg klqkhqafea evqansgaiv kldetgnlmi seghfaseti
      121 rtrlmelhrq welllekmre kgikllqaqk lvqylreced vmdwindkea ivtseelgqd
      181 lehvevlqkk feefqtdmaa heervnevnq faakliqeqh peeeliktkq devnaawqrl
      241 kglalqrqgk lfgaaevqrf nrdvdetisw ikekeqlmas ddfgrdlasv qallrkhegl
      301 erdlaaledk vkalcaeadr lqqshplsat qiqvkreeli tnweqirtla aerharlnds
      361 yrlqrfladf rdltswvtem kalinadela ndvagaeall drhqehkgei dahedsfksa
      421 desgqallaa ghyasdevre kltilseera allelwelrr qqyeqcmdlq lfyrdteqvd
      481 nwmskqeafl lnedlgdsld sveallkkhe dfekslsaqe ekitaldefa tkliqnnhya
      541 medvatrrda llsrrnalhe ramyrraqla dsfhlqqffr dsdelkswvn ekmktatdea
      601 ykdpsnlqgk vqkhqafeae lsanqsrida lekagqklid vdhyakdeva armnevislw
      661 kklleatelk giklreanqq qqfnrnvedi elwlyevegh lasddygkdl tnvqnlqkkh
      721 alleadvaah qdridgitiq arqfqdaghf daenikkkqe alvaryealk epmvarkqkl
      781 adslrlqqlf rdvedeetwi rekepiaast nrgkdligvq nllkkhqalq aeiaghepri
      841 kavtqkgnam veeghfaaed vkaklhelnq kweslkskas qrrqdledsl qaqqyfadan
      901 eaeswmreke pivgstdygk dedsaeallk khealmsdls aygssiqalr eqaqscrqqv
      961 apmddetgke lvlalydyqe ksprevtmkk gdiltllnst nkdwwkvevn drqgfvpaay
     1021 vkkldpaqsa srenlleeqg sialrqeqid nqtrvtkeag svslrmkqve elyhsllelg
     1081 ekrkgmleks ckkfmlfrea nelqqwinek eaaltseevg adleqvevlq kkfddfqkdl
     1141 kanesrlkdi nkvaedlese glmaeevqav qqqevygamp rdesdsktas pwksarlmvh
     1201 tvatfnsike lnerwrslqq laeersqllg sahevqrfhr dadetkewie eknqalntdn
     1261 yghdlasvqa lqrkhegfer dlaalgdkvn slgetaerli qshpesaedl qekctelnqa
     1321 wsslgkradq rkaklgdshd lqrflsdfrd lmswingirg lvssdelakd vtgaealler
     1381 hqehrteida ragtfqafeq fgqqllahgh yaspeikekl dvldqeradl ekawvqrrmm
     1441 ldqclelqlf hrdceqaenw maareaflnt edkgdsldsv ealikkhedf dkainvqeek
     1501 iaalqsfadq liagghyakg dissrrnevl drwrrlkaqm iekrsklges qtlqqfsrdv
     1561 deieawisek lqtasdesyk dptniqlskl lskhqkhqaf eaelhanadr irgvidmgns
     1621 lidrgacags edavkarlaa ladqwqflvq ksaeksqklk eankqqnfnt gikdfdfwls
     1681 eveallased ygkdlasvnn llkkhqllea disahedrlk dlnsqadslm tssafdtsqv
     1741 kdkrdtingr fqkiksmaas rrarlneshr lhqffrdmdd eeswikekkl lvssedygrd
     1801 ltgvqnlrkk hkrleaelaa hepaiqgvld tgkklsddnt igkeeiqqrl aqfvehwkel
     1861 kqlaaargqr leesleyqqf vanveeeeaw inekmtlvas edygdtlaai qgllkkheaf
     1921 etdftvhkdr vndvctngqd lvkknnhhee nisskmkgln gkvsdlekaa sqrkaklden
     1981 saflqfnwka dvveswigek enslktddyg rdlssvqtll tkqetfdagl qafqqegian
     2041 italkdqlla akhiqskaie arhaalmkrw sqllansatr kkklleaqsh frkvedlflt
     2101 fakkasafns wfenaeedlt dpvrcnslee ikalreahda frsslssaqa dfnqlaeldr
     2161 qiksfrvasn pytwftmeal eetwrnlqki ikerelelqk eqrrqeendk lrqefaqhan
     2221 afhqwiqetr tylldgscmv eesgtlesql eatkrkhqei ramrsqlkki edlgaameea
     2281 lildnkyteh stvglaqqwd qldqlgmrmq hnleqqiqar nttgvteeal kefsmmfkhf
     2341 dkdksgrlnh qefksclrsl gydlpmveeg epdpefeail dtvdpnrdgh vslqeymafm
     2401 isretenvks seeiesafra lssegkpyvt keelyqnltr eqadycvshm kpyvdgkgre
     2461 lptafdyvef trslfvn
//
LOCUS       XP_061010475            2472 aa            linear   MAM 02-DEC-2023
DEFINITION  spectrin alpha chain, non-erythrocytic 1 isoform X2 [Dama dama].
ACCESSION   XP_061010475
VERSION     XP_061010475.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154492.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2472
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2472
                     /product="spectrin alpha chain, non-erythrocytic 1 isoform
                     X2"
                     /calculated_mol_wt=284495
     Site            43..48
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          44..147
                     /region_name="Spectrin"
                     /note="Spectrin repeat; pfam00435"
                     /db_xref="CDD:395348"
     Region          150..361
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            254..259
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          362..572
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            466..471
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          468..678
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            572..577
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          679..890
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            783..788
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          890..>958
                     /region_name="Spectrin"
                     /note="Spectrin repeat; pfam00435"
                     /db_xref="CDD:395348"
     Region          971..1023
                     /region_name="SH3_Alpha_Spectrin"
                     /note="Src homology 3 domain of Alpha Spectrin; cd11808"
                     /db_xref="CDD:212742"
     Site            order(976,978,981,1003..1004,1017,1019..1020)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212742"
     Region          1092..1339
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1232..1237
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1234..1445
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1338..1343
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1446..1658
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1550..1555
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1658..1762
                     /region_name="Spectrin"
                     /note="Spectrin repeat; pfam00435"
                     /db_xref="CDD:395348"
     Region          1765..1974
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1869..1874
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1871..2082
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1975..1980
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1978..2196
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            2082..2087
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          2096..2312
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            2196..2201
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          2327..2395
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cd00051"
                     /db_xref="CDD:238008"
     Site            order(2336,2338,2340,2347,2379,2381,2383,2390)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238008"
     Region          2402..2470
                     /region_name="EFhand_Ca_insen"
                     /note="Ca2+ insensitive EF hand; pfam08726"
                     /db_xref="CDD:430177"
     CDS             1..2472
                     /gene="SPTAN1"
                     /coded_by="XM_061154492.1:129..7547"
                     /db_xref="GeneID:133064426"
ORIGIN      
        1 mdpsgvkvle taediqerrq qvldryhrfk elstlrrqkl edsyrfqffq rdaeelekwi
       61 qeklqiasde nykdptnlqg klqkhqafea evqansgaiv kldetgnlmi seghfaseti
      121 rtrlmelhrq welllekmre kgikllqaqk lvqylreced vmdwindkea ivtseelgqd
      181 lehvevlqkk feefqtdmaa heervnevnq faakliqeqh peeeliktkq devnaawqrl
      241 kglalqrqgk lfgaaevqrf nrdvdetisw ikekeqlmas ddfgrdlasv qallrkhegl
      301 erdlaaledk vkalcaeadr lqqshplsat qiqvkreeli tnweqirtla aerharlnds
      361 yrlqrfladf rdltswvtem kalinadela ndvagaeall drhqehkgei dahedsfksa
      421 desgqallaa ghyasdevre kltilseera allelwelrr qqyeqcmdlq lfyrdteqvd
      481 nwmskqeafl lnedlgdsld sveallkkhe dfekslsaqe ekitaldefa tkliqnnhya
      541 medvatrrda llsrrnalhe ramyrraqla dsfhlqqffr dsdelkswvn ekmktatdea
      601 ykdpsnlqgk vqkhqafeae lsanqsrida lekagqklid vdhyakdeva armnevislw
      661 kklleatelk giklreanqq qqfnrnvedi elwlyevegh lasddygkdl tnvqnlqkkh
      721 alleadvaah qdridgitiq arqfqdaghf daenikkkqe alvaryealk epmvarkqkl
      781 adslrlqqlf rdvedeetwi rekepiaast nrgkdligvq nllkkhqalq aeiaghepri
      841 kavtqkgnam veeghfaaed vkaklhelnq kweslkskas qrrqdledsl qaqqyfadan
      901 eaeswmreke pivgstdygk dedsaeallk khealmsdls aygssiqalr eqaqscrqqv
      961 apmddetgke lvlalydyqe ksprevtmkk gdiltllnst nkdwwkvevn drqgfvpaay
     1021 vkkldpaqsa srenlleeqg sialrqeqid nqtrvtkeag svslrmkqve elyhsllelg
     1081 ekrkgmleks ckkfmlfrea nelqqwinek eaaltseevg adleqvevlq kkfddfqkdl
     1141 kanesrlkdi nkvaedlese glmaeevqav qqqevygamp rdesdsktas pwksarlmvh
     1201 tvatfnsike lnerwrslqq laeersqllg sahevqrfhr dadetkewie eknqalntdn
     1261 yghdlasvqa lqrkhegfer dlaalgdkvn slgetaerli qshpesaedl qekctelnqa
     1321 wsslgkradq rkaklgdshd lqrflsdfrd lmswingirg lvssdelakd vtgaealler
     1381 hqehrteida ragtfqafeq fgqqllahgh yaspeikekl dvldqeradl ekawvqrrmm
     1441 ldqclelqlf hrdceqaenw maareaflnt edkgdsldsv ealikkhedf dkainvqeek
     1501 iaalqsfadq liagghyakg dissrrnevl drwrrlkaqm iekrsklges qtlqqfsrdv
     1561 deieawisek lqtasdesyk dptniqskhq khqafeaelh anadrirgvi dmgnslidrg
     1621 acagsedavk arlaaladqw qflvqksaek sqklkeankq qnfntgikdf dfwlseveal
     1681 lasedygkdl asvnnllkkh qlleadisah edrlkdlnsq adslmtssaf dtsqvkdkrd
     1741 tingrfqkik smaasrrarl neshrlhqff rdmddeeswi kekkllvsse dygrdltgvq
     1801 nlrkkhkrle aelaahepai qgvldtgkkl sddntigkee iqqrlaqfve hwkelkqlaa
     1861 argqrleesl eyqqfvanve eeeawinekm tlvasedygd tlaaiqgllk kheafetdft
     1921 vhkdrvndvc tngqdlvkkn nhheenissk mkglngkvsd lekaasqrka kldensaflq
     1981 fnwkadvves wigekenslk tddygrdlss vqtlltkqet fdaglqafqq egianitalk
     2041 dqllaakhiq skaiearhaa lmkrwsqlla nsatrkkkll eaqshfrkve dlfltfakka
     2101 safnswfena eedltdpvrc nsleeikalr eahdafrssl ssaqadfnql aeldrqiksf
     2161 rvasnpytwf tmealeetwr nlqkiikere lelqkeqrrq eendklrqef aqhanafhqw
     2221 iqetrtylld gscmveesgt lesqleatkr khqeiramrs qlkkiedlga ameealildn
     2281 kytehstvgl aqqwdqldql gmrmqhnleq qiqarnttgv teealkefsm mfkhfdkdks
     2341 grlnhqefks clrslgydlp mveegepdpe feaildtvdp nrdghvslqe ymafmisret
     2401 envksseeie safralsseg kpyvtkeely qnltreqady cvshmkpyvd gkgrelptaf
     2461 dyveftrslf vn
//
LOCUS       XP_061010476            2471 aa            linear   MAM 02-DEC-2023
DEFINITION  spectrin alpha chain, non-erythrocytic 1 isoform X3 [Dama dama].
ACCESSION   XP_061010476
VERSION     XP_061010476.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154493.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2471
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2471
                     /product="spectrin alpha chain, non-erythrocytic 1 isoform
                     X3"
                     /calculated_mol_wt=284387
     Site            43..48
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          44..147
                     /region_name="Spectrin"
                     /note="Spectrin repeat; pfam00435"
                     /db_xref="CDD:395348"
     Region          150..361
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            254..259
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          362..572
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            466..471
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          468..678
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            572..577
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          679..890
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            783..788
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          890..>958
                     /region_name="Spectrin"
                     /note="Spectrin repeat; pfam00435"
                     /db_xref="CDD:395348"
     Region          971..1023
                     /region_name="SH3_Alpha_Spectrin"
                     /note="Src homology 3 domain of Alpha Spectrin; cd11808"
                     /db_xref="CDD:212742"
     Site            order(976,978,981,1003..1004,1017,1019..1020)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212742"
     Region          1092..1339
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1232..1237
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1234..1445
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1338..1343
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1446..1663
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1550..1555
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1663..1767
                     /region_name="Spectrin"
                     /note="Spectrin repeat; pfam00435"
                     /db_xref="CDD:395348"
     Region          1770..1979
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1874..1879
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1876..2087
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1980..1985
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1983..2201
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            2087..2092
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          2101..2311
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            2201..2206
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          2326..2394
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cd00051"
                     /db_xref="CDD:238008"
     Site            order(2335,2337,2339,2346,2378,2380,2382,2389)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238008"
     Region          2401..2469
                     /region_name="EFhand_Ca_insen"
                     /note="Ca2+ insensitive EF hand; pfam08726"
                     /db_xref="CDD:430177"
     CDS             1..2471
                     /gene="SPTAN1"
                     /coded_by="XM_061154493.1:129..7544"
                     /db_xref="GeneID:133064426"
ORIGIN      
        1 mdpsgvkvle taediqerrq qvldryhrfk elstlrrqkl edsyrfqffq rdaeelekwi
       61 qeklqiasde nykdptnlqg klqkhqafea evqansgaiv kldetgnlmi seghfaseti
      121 rtrlmelhrq welllekmre kgikllqaqk lvqylreced vmdwindkea ivtseelgqd
      181 lehvevlqkk feefqtdmaa heervnevnq faakliqeqh peeeliktkq devnaawqrl
      241 kglalqrqgk lfgaaevqrf nrdvdetisw ikekeqlmas ddfgrdlasv qallrkhegl
      301 erdlaaledk vkalcaeadr lqqshplsat qiqvkreeli tnweqirtla aerharlnds
      361 yrlqrfladf rdltswvtem kalinadela ndvagaeall drhqehkgei dahedsfksa
      421 desgqallaa ghyasdevre kltilseera allelwelrr qqyeqcmdlq lfyrdteqvd
      481 nwmskqeafl lnedlgdsld sveallkkhe dfekslsaqe ekitaldefa tkliqnnhya
      541 medvatrrda llsrrnalhe ramyrraqla dsfhlqqffr dsdelkswvn ekmktatdea
      601 ykdpsnlqgk vqkhqafeae lsanqsrida lekagqklid vdhyakdeva armnevislw
      661 kklleatelk giklreanqq qqfnrnvedi elwlyevegh lasddygkdl tnvqnlqkkh
      721 alleadvaah qdridgitiq arqfqdaghf daenikkkqe alvaryealk epmvarkqkl
      781 adslrlqqlf rdvedeetwi rekepiaast nrgkdligvq nllkkhqalq aeiaghepri
      841 kavtqkgnam veeghfaaed vkaklhelnq kweslkskas qrrqdledsl qaqqyfadan
      901 eaeswmreke pivgstdygk dedsaeallk khealmsdls aygssiqalr eqaqscrqqv
      961 apmddetgke lvlalydyqe ksprevtmkk gdiltllnst nkdwwkvevn drqgfvpaay
     1021 vkkldpaqsa srenlleeqg sialrqeqid nqtrvtkeag svslrmkqve elyhsllelg
     1081 ekrkgmleks ckkfmlfrea nelqqwinek eaaltseevg adleqvevlq kkfddfqkdl
     1141 kanesrlkdi nkvaedlese glmaeevqav qqqevygamp rdesdsktas pwksarlmvh
     1201 tvatfnsike lnerwrslqq laeersqllg sahevqrfhr dadetkewie eknqalntdn
     1261 yghdlasvqa lqrkhegfer dlaalgdkvn slgetaerli qshpesaedl qekctelnqa
     1321 wsslgkradq rkaklgdshd lqrflsdfrd lmswingirg lvssdelakd vtgaealler
     1381 hqehrteida ragtfqafeq fgqqllahgh yaspeikekl dvldqeradl ekawvqrrmm
     1441 ldqclelqlf hrdceqaenw maareaflnt edkgdsldsv ealikkhedf dkainvqeek
     1501 iaalqsfadq liagghyakg dissrrnevl drwrrlkaqm iekrsklges qtlqqfsrdv
     1561 deieawisek lqtasdesyk dptniqlskl lskhqkhqaf eaelhanadr irgvidmgns
     1621 lidrgacags edavkarlaa ladqwqflvq ksaeksqklk eankqqnfnt gikdfdfwls
     1681 eveallased ygkdlasvnn llkkhqllea disahedrlk dlnsqadslm tssafdtsqv
     1741 kdkrdtingr fqkiksmaas rrarlneshr lhqffrdmdd eeswikekkl lvssedygrd
     1801 ltgvqnlrkk hkrleaelaa hepaiqgvld tgkklsddnt igkeeiqqrl aqfvehwkel
     1861 kqlaaargqr leesleyqqf vanveeeeaw inekmtlvas edygdtlaai qgllkkheaf
     1921 etdftvhkdr vndvctngqd lvkknnhhee nisskmkgln gkvsdlekaa sqrkaklden
     1981 saflqfnwka dvveswigek enslktddyg rdlssvqtll tkqetfdagl qafqqegian
     2041 italkdqlla akhiqskaie arhaalmkrw sqllansatr kkklleaqsh frkvedlflt
     2101 fakkasafns wfenaeedlt dpvrcnslee ikalreahda frsslssaqa dfnqlaeldr
     2161 qiksfrvasn pytwftmeal eetwrnlqki ikerelelqk eqrrqeendk lrqefaqhan
     2221 afhqwiqetr scmveesgtl esqleatkrk hqeiramrsq lkkiedlgaa meealildnk
     2281 ytehstvgla qqwdqldqlg mrmqhnleqq iqarnttgvt eealkefsmm fkhfdkdksg
     2341 rlnhqefksc lrslgydlpm veegepdpef eaildtvdpn rdghvslqey mafmisrete
     2401 nvksseeies afralssegk pyvtkeelyq nltreqadyc vshmkpyvdg kgrelptafd
     2461 yveftrslfv n
//
LOCUS       XP_061010477            2461 aa            linear   MAM 02-DEC-2023
DEFINITION  spectrin alpha chain, non-erythrocytic 1 isoform X4 [Dama dama].
ACCESSION   XP_061010477
VERSION     XP_061010477.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154494.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2461
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2461
                     /product="spectrin alpha chain, non-erythrocytic 1 isoform
                     X4"
                     /calculated_mol_wt=283293
     Site            43..48
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          44..147
                     /region_name="Spectrin"
                     /note="Spectrin repeat; pfam00435"
                     /db_xref="CDD:395348"
     Region          150..361
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            254..259
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          362..572
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            466..471
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          468..678
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            572..577
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          679..890
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            783..788
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          890..>958
                     /region_name="Spectrin"
                     /note="Spectrin repeat; pfam00435"
                     /db_xref="CDD:395348"
     Region          971..1023
                     /region_name="SH3_Alpha_Spectrin"
                     /note="Src homology 3 domain of Alpha Spectrin; cd11808"
                     /db_xref="CDD:212742"
     Site            order(976,978,981,1003..1004,1017,1019..1020)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212742"
     Region          1092..1323
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1216..1221
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1218..1429
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1322..1327
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1430..1647
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1534..1539
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1647..1751
                     /region_name="Spectrin"
                     /note="Spectrin repeat; pfam00435"
                     /db_xref="CDD:395348"
     Region          1754..1963
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1858..1863
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1860..2071
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1964..1969
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1967..2185
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            2071..2076
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          2085..2301
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            2185..2190
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          2316..2384
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cd00051"
                     /db_xref="CDD:238008"
     Site            order(2325,2327,2329,2336,2368,2370,2372,2379)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238008"
     Region          2391..2459
                     /region_name="EFhand_Ca_insen"
                     /note="Ca2+ insensitive EF hand; pfam08726"
                     /db_xref="CDD:430177"
     CDS             1..2461
                     /gene="SPTAN1"
                     /coded_by="XM_061154494.1:129..7514"
                     /db_xref="GeneID:133064426"
ORIGIN      
        1 mdpsgvkvle taediqerrq qvldryhrfk elstlrrqkl edsyrfqffq rdaeelekwi
       61 qeklqiasde nykdptnlqg klqkhqafea evqansgaiv kldetgnlmi seghfaseti
      121 rtrlmelhrq welllekmre kgikllqaqk lvqylreced vmdwindkea ivtseelgqd
      181 lehvevlqkk feefqtdmaa heervnevnq faakliqeqh peeeliktkq devnaawqrl
      241 kglalqrqgk lfgaaevqrf nrdvdetisw ikekeqlmas ddfgrdlasv qallrkhegl
      301 erdlaaledk vkalcaeadr lqqshplsat qiqvkreeli tnweqirtla aerharlnds
      361 yrlqrfladf rdltswvtem kalinadela ndvagaeall drhqehkgei dahedsfksa
      421 desgqallaa ghyasdevre kltilseera allelwelrr qqyeqcmdlq lfyrdteqvd
      481 nwmskqeafl lnedlgdsld sveallkkhe dfekslsaqe ekitaldefa tkliqnnhya
      541 medvatrrda llsrrnalhe ramyrraqla dsfhlqqffr dsdelkswvn ekmktatdea
      601 ykdpsnlqgk vqkhqafeae lsanqsrida lekagqklid vdhyakdeva armnevislw
      661 kklleatelk giklreanqq qqfnrnvedi elwlyevegh lasddygkdl tnvqnlqkkh
      721 alleadvaah qdridgitiq arqfqdaghf daenikkkqe alvaryealk epmvarkqkl
      781 adslrlqqlf rdvedeetwi rekepiaast nrgkdligvq nllkkhqalq aeiaghepri
      841 kavtqkgnam veeghfaaed vkaklhelnq kweslkskas qrrqdledsl qaqqyfadan
      901 eaeswmreke pivgstdygk dedsaeallk khealmsdls aygssiqalr eqaqscrqqv
      961 apmddetgke lvlalydyqe ksprevtmkk gdiltllnst nkdwwkvevn drqgfvpaay
     1021 vkkldpaqsa srenlleeqg sialrqeqid nqtrvtkeag svslrmkqve elyhsllelg
     1081 ekrkgmleks ckkfmlfrea nelqqwinek eaaltseevg adleqvevlq kkfddfqkdl
     1141 kanesrlkdi nkvaedlese glmaeevqav qqqevygamp rdesdsktas pwkelnerwr
     1201 slqqlaeers qllgsahevq rfhrdadetk ewieeknqal ntdnyghdla svqalqrkhe
     1261 gferdlaalg dkvnslgeta erliqshpes aedlqekcte lnqawsslgk radqrkaklg
     1321 dshdlqrfls dfrdlmswin girglvssde lakdvtgaea llerhqehrt eidaragtfq
     1381 afeqfgqqll ahghyaspei kekldvldqe radlekawvq rrmmldqcle lqlfhrdceq
     1441 aenwmaarea flntedkgds ldsvealikk hedfdkainv qeekiaalqs fadqliaggh
     1501 yakgdissrr nevldrwrrl kaqmiekrsk lgesqtlqqf srdvdeieaw iseklqtasd
     1561 esykdptniq lskllskhqk hqafeaelha nadrirgvid mgnslidrga cagsedavka
     1621 rlaaladqwq flvqksaeks qklkeankqq nfntgikdfd fwlseveall asedygkdla
     1681 svnnllkkhq lleadisahe drlkdlnsqa dslmtssafd tsqvkdkrdt ingrfqkiks
     1741 maasrrarln eshrlhqffr dmddeeswik ekkllvssed ygrdltgvqn lrkkhkrlea
     1801 elaahepaiq gvldtgkkls ddntigkeei qqrlaqfveh wkelkqlaaa rgqrleesle
     1861 yqqfvanvee eeawinekmt lvasedygdt laaiqgllkk heafetdftv hkdrvndvct
     1921 ngqdlvkknn hheenisskm kglngkvsdl ekaasqrkak ldensaflqf nwkadvvesw
     1981 igekenslkt ddygrdlssv qtlltkqetf daglqafqqe gianitalkd qllaakhiqs
     2041 kaiearhaal mkrwsqllan satrkkklle aqshfrkved lfltfakkas afnswfenae
     2101 edltdpvrcn sleeikalre ahdafrssls saqadfnqla eldrqiksfr vasnpytwft
     2161 mealeetwrn lqkiikerel elqkeqrrqe endklrqefa qhanafhqwi qetrtylldg
     2221 scmveesgtl esqleatkrk hqeiramrsq lkkiedlgaa meealildnk ytehstvgla
     2281 qqwdqldqlg mrmqhnleqq iqarnttgvt eealkefsmm fkhfdkdksg rlnhqefksc
     2341 lrslgydlpm veegepdpef eaildtvdpn rdghvslqey mafmisrete nvksseeies
     2401 afralssegk pyvtkeelyq nltreqadyc vshmkpyvdg kgrelptafd yveftrslfv
     2461 n
//
LOCUS       XP_061010478            2457 aa            linear   MAM 02-DEC-2023
DEFINITION  spectrin alpha chain, non-erythrocytic 1 isoform X5 [Dama dama].
ACCESSION   XP_061010478
VERSION     XP_061010478.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154495.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2457
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2457
                     /product="spectrin alpha chain, non-erythrocytic 1 isoform
                     X5"
                     /calculated_mol_wt=282807
     Site            43..48
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          44..147
                     /region_name="Spectrin"
                     /note="Spectrin repeat; pfam00435"
                     /db_xref="CDD:395348"
     Region          150..361
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            254..259
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          362..572
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            466..471
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          468..678
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            572..577
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          679..890
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            783..788
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          890..>958
                     /region_name="Spectrin"
                     /note="Spectrin repeat; pfam00435"
                     /db_xref="CDD:395348"
     Region          971..1023
                     /region_name="SH3_Alpha_Spectrin"
                     /note="Src homology 3 domain of Alpha Spectrin; cd11808"
                     /db_xref="CDD:212742"
     Site            order(976,978,981,1003..1004,1017,1019..1020)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212742"
     Region          1072..1319
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1212..1217
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1214..1425
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1318..1323
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1426..1643
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1530..1535
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1643..1747
                     /region_name="Spectrin"
                     /note="Spectrin repeat; pfam00435"
                     /db_xref="CDD:395348"
     Region          1750..1959
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1854..1859
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1856..2067
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1960..1965
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1963..2181
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            2067..2072
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          2081..2297
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            2181..2186
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          2312..2380
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cd00051"
                     /db_xref="CDD:238008"
     Site            order(2321,2323,2325,2332,2364,2366,2368,2375)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238008"
     Region          2387..2455
                     /region_name="EFhand_Ca_insen"
                     /note="Ca2+ insensitive EF hand; pfam08726"
                     /db_xref="CDD:430177"
     CDS             1..2457
                     /gene="SPTAN1"
                     /coded_by="XM_061154495.1:129..7502"
                     /db_xref="GeneID:133064426"
ORIGIN      
        1 mdpsgvkvle taediqerrq qvldryhrfk elstlrrqkl edsyrfqffq rdaeelekwi
       61 qeklqiasde nykdptnlqg klqkhqafea evqansgaiv kldetgnlmi seghfaseti
      121 rtrlmelhrq welllekmre kgikllqaqk lvqylreced vmdwindkea ivtseelgqd
      181 lehvevlqkk feefqtdmaa heervnevnq faakliqeqh peeeliktkq devnaawqrl
      241 kglalqrqgk lfgaaevqrf nrdvdetisw ikekeqlmas ddfgrdlasv qallrkhegl
      301 erdlaaledk vkalcaeadr lqqshplsat qiqvkreeli tnweqirtla aerharlnds
      361 yrlqrfladf rdltswvtem kalinadela ndvagaeall drhqehkgei dahedsfksa
      421 desgqallaa ghyasdevre kltilseera allelwelrr qqyeqcmdlq lfyrdteqvd
      481 nwmskqeafl lnedlgdsld sveallkkhe dfekslsaqe ekitaldefa tkliqnnhya
      541 medvatrrda llsrrnalhe ramyrraqla dsfhlqqffr dsdelkswvn ekmktatdea
      601 ykdpsnlqgk vqkhqafeae lsanqsrida lekagqklid vdhyakdeva armnevislw
      661 kklleatelk giklreanqq qqfnrnvedi elwlyevegh lasddygkdl tnvqnlqkkh
      721 alleadvaah qdridgitiq arqfqdaghf daenikkkqe alvaryealk epmvarkqkl
      781 adslrlqqlf rdvedeetwi rekepiaast nrgkdligvq nllkkhqalq aeiaghepri
      841 kavtqkgnam veeghfaaed vkaklhelnq kweslkskas qrrqdledsl qaqqyfadan
      901 eaeswmreke pivgstdygk dedsaeallk khealmsdls aygssiqalr eqaqscrqqv
      961 apmddetgke lvlalydyqe ksprevtmkk gdiltllnst nkdwwkvevn drqgfvpaay
     1021 vkkldpaqsa srenlleeqg sialrqeqid nqyhsllelg ekrkgmleks ckkfmlfrea
     1081 nelqqwinek eaaltseevg adleqvevlq kkfddfqkdl kanesrlkdi nkvaedlese
     1141 glmaeevqav qqqevygamp rdesdsktas pwksarlmvh tvatfnsike lnerwrslqq
     1201 laeersqllg sahevqrfhr dadetkewie eknqalntdn yghdlasvqa lqrkhegfer
     1261 dlaalgdkvn slgetaerli qshpesaedl qekctelnqa wsslgkradq rkaklgdshd
     1321 lqrflsdfrd lmswingirg lvssdelakd vtgaealler hqehrteida ragtfqafeq
     1381 fgqqllahgh yaspeikekl dvldqeradl ekawvqrrmm ldqclelqlf hrdceqaenw
     1441 maareaflnt edkgdsldsv ealikkhedf dkainvqeek iaalqsfadq liagghyakg
     1501 dissrrnevl drwrrlkaqm iekrsklges qtlqqfsrdv deieawisek lqtasdesyk
     1561 dptniqlskl lskhqkhqaf eaelhanadr irgvidmgns lidrgacags edavkarlaa
     1621 ladqwqflvq ksaeksqklk eankqqnfnt gikdfdfwls eveallased ygkdlasvnn
     1681 llkkhqllea disahedrlk dlnsqadslm tssafdtsqv kdkrdtingr fqkiksmaas
     1741 rrarlneshr lhqffrdmdd eeswikekkl lvssedygrd ltgvqnlrkk hkrleaelaa
     1801 hepaiqgvld tgkklsddnt igkeeiqqrl aqfvehwkel kqlaaargqr leesleyqqf
     1861 vanveeeeaw inekmtlvas edygdtlaai qgllkkheaf etdftvhkdr vndvctngqd
     1921 lvkknnhhee nisskmkgln gkvsdlekaa sqrkaklden saflqfnwka dvveswigek
     1981 enslktddyg rdlssvqtll tkqetfdagl qafqqegian italkdqlla akhiqskaie
     2041 arhaalmkrw sqllansatr kkklleaqsh frkvedlflt fakkasafns wfenaeedlt
     2101 dpvrcnslee ikalreahda frsslssaqa dfnqlaeldr qiksfrvasn pytwftmeal
     2161 eetwrnlqki ikerelelqk eqrrqeendk lrqefaqhan afhqwiqetr tylldgscmv
     2221 eesgtlesql eatkrkhqei ramrsqlkki edlgaameea lildnkyteh stvglaqqwd
     2281 qldqlgmrmq hnleqqiqar nttgvteeal kefsmmfkhf dkdksgrlnh qefksclrsl
     2341 gydlpmveeg epdpefeail dtvdpnrdgh vslqeymafm isretenvks seeiesafra
     2401 lssegkpyvt keelyqnltr eqadycvshm kpyvdgkgre lptafdyvef trslfvn
//
LOCUS       XP_061010479            2452 aa            linear   MAM 02-DEC-2023
DEFINITION  spectrin alpha chain, non-erythrocytic 1 isoform X6 [Dama dama].
ACCESSION   XP_061010479
VERSION     XP_061010479.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154496.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2452
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2452
                     /product="spectrin alpha chain, non-erythrocytic 1 isoform
                     X6"
                     /calculated_mol_wt=282252
     Site            43..48
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          44..147
                     /region_name="Spectrin"
                     /note="Spectrin repeat; pfam00435"
                     /db_xref="CDD:395348"
     Region          150..361
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            254..259
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          362..572
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            466..471
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          468..678
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            572..577
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          679..890
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            783..788
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          890..>958
                     /region_name="Spectrin"
                     /note="Spectrin repeat; pfam00435"
                     /db_xref="CDD:395348"
     Region          971..1023
                     /region_name="SH3_Alpha_Spectrin"
                     /note="Src homology 3 domain of Alpha Spectrin; cd11808"
                     /db_xref="CDD:212742"
     Site            order(976,978,981,1003..1004,1017,1019..1020)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212742"
     Region          1072..1319
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1212..1217
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1214..1425
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1318..1323
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1426..1638
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1530..1535
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1638..1742
                     /region_name="Spectrin"
                     /note="Spectrin repeat; pfam00435"
                     /db_xref="CDD:395348"
     Region          1745..1954
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1849..1854
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1851..2062
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1955..1960
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1958..2176
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            2062..2067
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          2076..2292
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            2176..2181
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          2307..2375
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cd00051"
                     /db_xref="CDD:238008"
     Site            order(2316,2318,2320,2327,2359,2361,2363,2370)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238008"
     Region          2382..2450
                     /region_name="EFhand_Ca_insen"
                     /note="Ca2+ insensitive EF hand; pfam08726"
                     /db_xref="CDD:430177"
     CDS             1..2452
                     /gene="SPTAN1"
                     /coded_by="XM_061154496.1:129..7487"
                     /db_xref="GeneID:133064426"
ORIGIN      
        1 mdpsgvkvle taediqerrq qvldryhrfk elstlrrqkl edsyrfqffq rdaeelekwi
       61 qeklqiasde nykdptnlqg klqkhqafea evqansgaiv kldetgnlmi seghfaseti
      121 rtrlmelhrq welllekmre kgikllqaqk lvqylreced vmdwindkea ivtseelgqd
      181 lehvevlqkk feefqtdmaa heervnevnq faakliqeqh peeeliktkq devnaawqrl
      241 kglalqrqgk lfgaaevqrf nrdvdetisw ikekeqlmas ddfgrdlasv qallrkhegl
      301 erdlaaledk vkalcaeadr lqqshplsat qiqvkreeli tnweqirtla aerharlnds
      361 yrlqrfladf rdltswvtem kalinadela ndvagaeall drhqehkgei dahedsfksa
      421 desgqallaa ghyasdevre kltilseera allelwelrr qqyeqcmdlq lfyrdteqvd
      481 nwmskqeafl lnedlgdsld sveallkkhe dfekslsaqe ekitaldefa tkliqnnhya
      541 medvatrrda llsrrnalhe ramyrraqla dsfhlqqffr dsdelkswvn ekmktatdea
      601 ykdpsnlqgk vqkhqafeae lsanqsrida lekagqklid vdhyakdeva armnevislw
      661 kklleatelk giklreanqq qqfnrnvedi elwlyevegh lasddygkdl tnvqnlqkkh
      721 alleadvaah qdridgitiq arqfqdaghf daenikkkqe alvaryealk epmvarkqkl
      781 adslrlqqlf rdvedeetwi rekepiaast nrgkdligvq nllkkhqalq aeiaghepri
      841 kavtqkgnam veeghfaaed vkaklhelnq kweslkskas qrrqdledsl qaqqyfadan
      901 eaeswmreke pivgstdygk dedsaeallk khealmsdls aygssiqalr eqaqscrqqv
      961 apmddetgke lvlalydyqe ksprevtmkk gdiltllnst nkdwwkvevn drqgfvpaay
     1021 vkkldpaqsa srenlleeqg sialrqeqid nqyhsllelg ekrkgmleks ckkfmlfrea
     1081 nelqqwinek eaaltseevg adleqvevlq kkfddfqkdl kanesrlkdi nkvaedlese
     1141 glmaeevqav qqqevygamp rdesdsktas pwksarlmvh tvatfnsike lnerwrslqq
     1201 laeersqllg sahevqrfhr dadetkewie eknqalntdn yghdlasvqa lqrkhegfer
     1261 dlaalgdkvn slgetaerli qshpesaedl qekctelnqa wsslgkradq rkaklgdshd
     1321 lqrflsdfrd lmswingirg lvssdelakd vtgaealler hqehrteida ragtfqafeq
     1381 fgqqllahgh yaspeikekl dvldqeradl ekawvqrrmm ldqclelqlf hrdceqaenw
     1441 maareaflnt edkgdsldsv ealikkhedf dkainvqeek iaalqsfadq liagghyakg
     1501 dissrrnevl drwrrlkaqm iekrsklges qtlqqfsrdv deieawisek lqtasdesyk
     1561 dptniqskhq khqafeaelh anadrirgvi dmgnslidrg acagsedavk arlaaladqw
     1621 qflvqksaek sqklkeankq qnfntgikdf dfwlseveal lasedygkdl asvnnllkkh
     1681 qlleadisah edrlkdlnsq adslmtssaf dtsqvkdkrd tingrfqkik smaasrrarl
     1741 neshrlhqff rdmddeeswi kekkllvsse dygrdltgvq nlrkkhkrle aelaahepai
     1801 qgvldtgkkl sddntigkee iqqrlaqfve hwkelkqlaa argqrleesl eyqqfvanve
     1861 eeeawinekm tlvasedygd tlaaiqgllk kheafetdft vhkdrvndvc tngqdlvkkn
     1921 nhheenissk mkglngkvsd lekaasqrka kldensaflq fnwkadvves wigekenslk
     1981 tddygrdlss vqtlltkqet fdaglqafqq egianitalk dqllaakhiq skaiearhaa
     2041 lmkrwsqlla nsatrkkkll eaqshfrkve dlfltfakka safnswfena eedltdpvrc
     2101 nsleeikalr eahdafrssl ssaqadfnql aeldrqiksf rvasnpytwf tmealeetwr
     2161 nlqkiikere lelqkeqrrq eendklrqef aqhanafhqw iqetrtylld gscmveesgt
     2221 lesqleatkr khqeiramrs qlkkiedlga ameealildn kytehstvgl aqqwdqldql
     2281 gmrmqhnleq qiqarnttgv teealkefsm mfkhfdkdks grlnhqefks clrslgydlp
     2341 mveegepdpe feaildtvdp nrdghvslqe ymafmisret envksseeie safralsseg
     2401 kpyvtkeely qnltreqady cvshmkpyvd gkgrelptaf dyveftrslf vn
//
LOCUS       XP_061010480             536 aa            linear   MAM 02-DEC-2023
DEFINITION  cytoplasmic dynein 2 intermediate chain 2 isoform X1 [Dama dama].
ACCESSION   XP_061010480
VERSION     XP_061010480.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154497.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..536
                     /product="cytoplasmic dynein 2 intermediate chain 2
                     isoform X1"
                     /calculated_mol_wt=57410
     Region          164..215
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          217..515
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          222..264
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          270..328
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          337..389
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          396..432
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          438..477
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          485..512
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..536
                     /gene="DYNC2I2"
                     /coded_by="XM_061154497.1:13..1623"
                     /db_xref="GeneID:133064427"
ORIGIN      
        1 matsaqpgll glagsaggea latngtaste gperpgppqd etlgvvsvps qwrgvqgirg
       61 etkscqtasi ataeasvqar khvdaevqte vpepvslasv pryngprlaa flrkveamvt
      121 relnknwqsh afdgfevnwa eqqqtvtclh tlsyppaqgq glhvtgvswn ttgsvvacay
      181 grlddgdwst lksfvctwnl drrglnpqqp savvevpsav mclafhptqp shmagglysg
      241 evlvwdtsrp edpllwrtgl tddthtdpvy qvvwlpeprh shrfqllsva adgkvllwqg
      301 vgagqlqlsa gfalavqqlp rntklkkpsr getevgatav afssfdpslf vlgteggfpl
      361 kcslaaaeaa vtrmpssvpl rapaqftfap hggpvysvsc spfhrnlfls agtdghvhly
      421 smlqaqplts lqlshkylfa vrwspvrplv faaasgagdv qlfdlqkssq kptvsvkqte
      481 despvyclef ncqqtqllaa gdakgtvkvw qlssefteqg areterldql asevas
//
LOCUS       XP_061010481             527 aa            linear   MAM 02-DEC-2023
DEFINITION  cytoplasmic dynein 2 intermediate chain 2 isoform X2 [Dama dama].
ACCESSION   XP_061010481
VERSION     XP_061010481.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154498.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..527
                     /product="cytoplasmic dynein 2 intermediate chain 2
                     isoform X2"
                     /calculated_mol_wt=56325
     Region          155..206
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          208..506
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          213..255
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          261..319
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          328..380
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          387..423
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          429..468
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          476..503
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..527
                     /gene="DYNC2I2"
                     /coded_by="XM_061154498.1:13..1596"
                     /db_xref="GeneID:133064427"
ORIGIN      
        1 matsaqpgll glagsaggea latngtaste gperpgppqd etlgvvsvps qwrgvqgirg
       61 etkscqtasi ataeasvqar khvdaevqte vpepvslasv pryngprlaa flrkveamvt
      121 relnknwqsh afdgfevtcl htlsyppaqg qglhvtgvsw nttgsvvaca ygrlddgdws
      181 tlksfvctwn ldrrglnpqq psavvevpsa vmclafhptq pshmagglys gevlvwdtsr
      241 pedpllwrtg ltddthtdpv yqvvwlpepr hshrfqllsv aadgkvllwq gvgagqlqls
      301 agfalavqql prntklkkps rgetevgata vafssfdpsl fvlgteggfp lkcslaaaea
      361 avtrmpssvp lrapaqftfa phggpvysvs cspfhrnlfl sagtdghvhl ysmlqaqplt
      421 slqlshkylf avrwspvrpl vfaaasgagd vqlfdlqkss qkptvsvkqt edespvycle
      481 fncqqtqlla agdakgtvkv wqlssefteq gareterldq lasevas
//
LOCUS       XP_061010483             453 aa            linear   MAM 02-DEC-2023
DEFINITION  cytoplasmic dynein 2 intermediate chain 2 isoform X3 [Dama dama].
ACCESSION   XP_061010483
VERSION     XP_061010483.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154500.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..453
                     /product="cytoplasmic dynein 2 intermediate chain 2
                     isoform X3"
                     /calculated_mol_wt=48173
     Region          2..431
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          81..132
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          139..181
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          187..245
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          254..306
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          313..349
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          355..394
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          402..429
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..453
                     /gene="DYNC2I2"
                     /coded_by="XM_061154500.1:13..1374"
                     /db_xref="GeneID:133064427"
ORIGIN      
        1 matsaqpgll glagsaggea latngtaste gperpgppqd etlgvvsvps qwrgvqgirg
       61 etvtclhtls yppaqgqglh vtgvswnttg svvacaygrl ddgdwstlks fvctwnldrr
      121 glnpqqpsav vevpsavmcl afhptqpshm agglysgevl vwdtsrpedp llwrtgltdd
      181 thtdpvyqvv wlpeprhshr fqllsvaadg kvllwqgvga gqlqlsagfa lavqqlprnt
      241 klkkpsrget evgatavafs sfdpslfvlg teggfplkcs laaaeaavtr mpssvplrap
      301 aqftfaphgg pvysvscspf hrnlflsagt dghvhlysml qaqpltslql shkylfavrw
      361 spvrplvfaa asgagdvqlf dlqkssqkpt vsvkqtedes pvyclefncq qtqllaagda
      421 kgtvkvwqls sefteqgare terldqlase vas
//
LOCUS       XP_061010484             450 aa            linear   MAM 02-DEC-2023
DEFINITION  cytoplasmic dynein 2 intermediate chain 2 isoform X4 [Dama dama].
ACCESSION   XP_061010484
VERSION     XP_061010484.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154501.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..450
                     /product="cytoplasmic dynein 2 intermediate chain 2
                     isoform X4"
                     /calculated_mol_wt=47604
     Region          <144..316
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          164..215
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          217..>298
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          220..263
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          269..298
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..450
                     /gene="DYNC2I2"
                     /coded_by="XM_061154501.1:13..1365"
                     /db_xref="GeneID:133064427"
ORIGIN      
        1 matsaqpgll glagsaggea latngtaste gperpgppqd etlgvvsvps qwrgvqgirg
       61 etkscqtasi ataeasvqar khvdaevqte vpepvslasv pryngprlaa flrkveamvt
      121 relnknwqsh afdgfevnwa eqqqtvtclh tlsyppaqgq glhvtgvswn ttgsvvacay
      181 grlddgdwst lksfvctwnl drrglnpqqp savvevpsav mclafhptqp shmagglysg
      241 evlvwdtsrp edpllwrtgl tddthtdpvy qvvwlpeprh shrfqllsva adgkvllwqg
      301 vgagqlqlsa gfalavqqlp rntklkkpsr getevgatav afssfdpslf vlgteggfpl
      361 kcslaaaeaa vtrmpssvpl rapaqftfap hggpvysesl perrdgwprp pvlhaagpap
      421 dlpaalpqvp vccalvpgap pgvcgcfwgr
//
LOCUS       XP_061010485             145 aa            linear   MAM 02-DEC-2023
DEFINITION  small ribosomal subunit protein uS19-like [Dama dama].
ACCESSION   XP_061010485
VERSION     XP_061010485.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154502.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..145
                     /product="small ribosomal subunit protein uS19-like"
                     /calculated_mol_wt=16960
     Region          1..143
                     /region_name="PTZ00096"
                     /note="40S ribosomal protein S15; Provisional"
                     /db_xref="CDD:185442"
     CDS             1..145
                     /gene="LOC133064428"
                     /coded_by="XM_061154502.1:33..470"
                     /db_xref="GeneID:133064428"
ORIGIN      
        1 maeveqkkkr tfrkftyrgv dldqlldmsy eqltqlysar qrrrlnrglr rkqhsllkrl
       61 rkakkdappm ekpevvkthl rdmiilpeiv gsmvgiyngk tfnqveikpe mighylgefs
      121 itykpvkhgr pgirathssr fiplk
//
LOCUS       XP_061010486             698 aa            linear   MAM 02-DEC-2023
DEFINITION  mRNA export factor GLE1 [Dama dama].
ACCESSION   XP_061010486
VERSION     XP_061010486.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154503.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..698
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..698
                     /product="mRNA export factor GLE1"
                     /calculated_mol_wt=79758
     Region          <130..>246
                     /region_name="Caldesmon"
                     /note="pfam02029"
                     /db_xref="CDD:460421"
     Region          <151..>362
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          410..649
                     /region_name="GLE1"
                     /note="GLE1-like protein; pfam07817"
                     /db_xref="CDD:462280"
     CDS             1..698
                     /gene="GLE1"
                     /coded_by="XM_061154503.1:95..2191"
                     /db_xref="GeneID:133064429"
ORIGIN      
        1 mpsegrcwet lqalrssdkg rlcydrdwll rgedvlqecm slpklssysg wvvdhvlphi
       61 qknappsets assvstsald qrssvprspl rnpafspvss atsngtkdkh esphtepmvl
      121 qsprgmkveg cirmyelvhr mkgaeglrqw qeeqekkvwa lsemaseqlk rfderkelkh
      181 hkefqdlrev mekssrealg qqeklkaehr hrakilnlkl reaeqqrlkq eeqerlrkee
      241 gqarlrslya lqeevlhlsq qldssdqhra llqvdlsafr trgnqlcglv sgiiratsen
      301 gfptvedqaa aqgalqemrd llsnlhqeis raceekrrrd eeearikrqe sqmqqrpeah
      361 kespvpnqgp gakpnedlqv kvqdstmqwy qqlqeasgqc vlafeglsns kdsqakkikm
      421 dlqkaatipv sqistiagsk lkeifdkihs llsgkpvqsg gravsvtlnp qgldfvqykl
      481 aekfvkqgee evashheaaf piavvasgiw elhprvgdli lahlhkkcpy svpfypafke
      541 gmaledyqrm lgyqvkdskv eqqdnflkrm sgmirlyaai iqlrwpygnr qethphglnh
      601 gwrwlaqiln meplsdvtat llfdflevcg nalmkqyqvq fwkmillike dyfprieait
      661 ssgqmgsfir lkqflekclq hreipvpkgf ltssfwrs
//
LOCUS       XP_061010487             915 aa            linear   MAM 02-DEC-2023
DEFINITION  outer dense fiber protein 2 isoform X1 [Dama dama].
ACCESSION   XP_061010487
VERSION     XP_061010487.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154504.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..915
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..915
                     /product="outer dense fiber protein 2 isoform X1"
                     /calculated_mol_wt=105398
     Region          <202..869
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..915
                     /gene="ODF2"
                     /coded_by="XM_061154504.1:16..2763"
                     /db_xref="GeneID:133064430"
ORIGIN      
        1 mgelptgcrk rrrkrggvaa gaglhpprrl hgtalasdfn dfirrrfwaq pcrswfpscg
       61 kngvtsltqk kvlrtpcgap svtvtkrtmk drsstpplhv hvdentpvhv hikklsktsa
      121 tnsqkshkrg mkgdtvnvrr svrvktkvpw mppgkssarh vgcnwenpph cleitppsse
      181 klvsvmrlsd lstedddsgh ckmnrydkki dslmnavgcl ksevrevkmq kgerqmakrf
      241 leerkeelee vaqelaeteh entvlrhnie rmkeekdytm lqkkhlqqek eclmsklvea
      301 emdgaaaakq vmalkdtigk lksekqmtcs dintltrqke lllqklstfe etnrtlrdll
      361 rdqhckedsd rlmeqqgtll krlaeadsek arlllllqdk dkeveellqe iqcekaqakt
      421 aselsksmet mrghlqaqlr ckeaensrlc mqiknlersg nqhkaeveai meqlkelkqk
      481 gerdkeslkk airaqkerae kseeyaeqlh vqladkdlyv aealstlesw rsrynqvvkd
      541 kgdleleiiv lndrvtdlvn qqqtleekmr edrdslverl hrqtaeysaf klenerlkas
      601 fapmedklnq ahievqqlka svknyegmid nyksqvmktr leadevaaql ercdkenkil
      661 kdemnkeiea arrqfqsqla dlqqlpdilk iteaklaecq dqlqgyerkn idltaiisdl
      721 rsriehqgdk lemarekhqa sqkenkqlsl kvdelerkle atsaqniefl qviakreeai
      781 hqsqlrleek trecgtlarq lesaiedarr qveqtkehaa skeraaqkki ldletqlsrt
      841 ktelsqlrrs rddadrryqs rlqdlkdrle qsestnrsmq nyvqflkssy anvfgdgpyt
      901 syltsspirs rsppt
//
LOCUS       XP_061010488             912 aa            linear   MAM 02-DEC-2023
DEFINITION  outer dense fiber protein 2 isoform X2 [Dama dama].
ACCESSION   XP_061010488
VERSION     XP_061010488.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154505.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..912
                     /product="outer dense fiber protein 2 isoform X2"
                     /calculated_mol_wt=105014
     Region          <202..866
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..912
                     /gene="ODF2"
                     /coded_by="XM_061154505.1:16..2754"
                     /db_xref="GeneID:133064430"
ORIGIN      
        1 mgelptgcrk rrrkrggvaa gaglhpprrl hgtalasdfn dfirrrfwaq pcrswfpscg
       61 kngvtsltqk kvlrtpcgap svtvtkrtmk drsstpplhv hvdentpvhv hikklsktsa
      121 tnsqkshkrg mkgdtvnvrr svrvktkvpw mppgkssarh vgcnwenpph cleitppsse
      181 klvsvmrlsd lstedddsgh ckmnrydkki dslmnavgcl ksevkmqkge rqmakrflee
      241 rkeeleevaq elaetehent vlrhniermk eekdytmlqk khlqqekecl msklveaemd
      301 gaaaakqvma lkdtigklks ekqmtcsdin tltrqkelll qklstfeetn rtlrdllrdq
      361 hckedsdrlm eqqgtllkrl aeadsekarl llllqdkdke veellqeiqc ekaqaktase
      421 lsksmetmrg hlqaqlrcke aensrlcmqi knlersgnqh kaeveaimeq lkelkqkger
      481 dkeslkkair aqkeraekse eyaeqlhvql adkdlyvaea lstleswrsr ynqvvkdkgd
      541 leleiivlnd rvtdlvnqqq tleekmredr dslverlhrq taeysafkle nerlkasfap
      601 medklnqahi evqqlkasvk nyegmidnyk sqvmktrlea devaaqlerc dkenkilkde
      661 mnkeieaarr qfqsqladlq qlpdilkite aklaecqdql qgyerknidl taiisdlrsr
      721 iehqgdklem arekhqasqk enkqlslkvd elerkleats aqnieflqvi akreeaihqs
      781 qlrleektre cgtlarqles aiedarrqve qtkehaaske raaqkkildl etqlsrtkte
      841 lsqlrrsrdd adrryqsrlq dlkdrleqse stnrsmqnyv qflkssyanv fgdgpytsyl
      901 tsspirsrsp pt
//
LOCUS       XP_061010489             912 aa            linear   MAM 02-DEC-2023
DEFINITION  outer dense fiber protein 2 isoform X3 [Dama dama].
ACCESSION   XP_061010489
VERSION     XP_061010489.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154506.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..912
                     /product="outer dense fiber protein 2 isoform X3"
                     /calculated_mol_wt=105013
     Region          <204..866
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..912
                     /gene="ODF2"
                     /coded_by="XM_061154506.1:16..2754"
                     /db_xref="GeneID:133064430"
ORIGIN      
        1 mgelptgcrk rrrkrggvaa gaglhpprrl hgtalasdfn dfirrrfwaq pcrswfpscg
       61 kngvtsltqk kvlrtpcgap svtvtkrtmk drsstpplhv hvdentpvhv hikklsktsa
      121 tnsqkshkrg mkgdtvnvrr svrvktkvpw mppgkssarh vgcnwenpph cleitppsse
      181 klvsvmrlsd lstedddsgh ckmnrydkki dslmnavgcl ksevrevkmq kgerqmakrf
      241 leerkeelee vaqelaeteh entvlrhnie rmkeekdytm lqkkhlqqek eclmsklvea
      301 emdgaaaakq vmalkdtigk lksmtcsdin tltrqkelll qklstfeetn rtlrdllrdq
      361 hckedsdrlm eqqgtllkrl aeadsekarl llllqdkdke veellqeiqc ekaqaktase
      421 lsksmetmrg hlqaqlrcke aensrlcmqi knlersgnqh kaeveaimeq lkelkqkger
      481 dkeslkkair aqkeraekse eyaeqlhvql adkdlyvaea lstleswrsr ynqvvkdkgd
      541 leleiivlnd rvtdlvnqqq tleekmredr dslverlhrq taeysafkle nerlkasfap
      601 medklnqahi evqqlkasvk nyegmidnyk sqvmktrlea devaaqlerc dkenkilkde
      661 mnkeieaarr qfqsqladlq qlpdilkite aklaecqdql qgyerknidl taiisdlrsr
      721 iehqgdklem arekhqasqk enkqlslkvd elerkleats aqnieflqvi akreeaihqs
      781 qlrleektre cgtlarqles aiedarrqve qtkehaaske raaqkkildl etqlsrtkte
      841 lsqlrrsrdd adrryqsrlq dlkdrleqse stnrsmqnyv qflkssyanv fgdgpytsyl
      901 tsspirsrsp pt
//
LOCUS       XP_061010490             905 aa            linear   MAM 02-DEC-2023
DEFINITION  outer dense fiber protein 2 isoform X4 [Dama dama].
ACCESSION   XP_061010490
VERSION     XP_061010490.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154507.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..905
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..905
                     /product="outer dense fiber protein 2 isoform X4"
                     /calculated_mol_wt=104297
     Region          <171..859
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..905
                     /gene="ODF2"
                     /coded_by="XM_061154507.1:16..2733"
                     /db_xref="GeneID:133064430"
ORIGIN      
        1 mgelptgcrk rrrkrggvaa gaglhpprrl hgtalasdfn dfirrrfwaq pcrswfpscg
       61 kngvtsltqk kvlrtpcgap svtvtkrtmk drsstpplhv hvdentpvhv hikklsktsa
      121 tnsqkshkrg mkgdtvnvrr svrvktkvpw mppgkssarh vgcnwenpph cleitppsse
      181 klvsvmrlsd lstedddsgh ckmnrydkki dslmnavkmq kgerqmakrf leerkeelee
      241 vaqelaeteh entvlrhnie rmkeekdytm lqkkhlqqek eclmsklvea emdgaaaakq
      301 vmalkdtigk lksekqmtcs dintltrqke lllqklstfe etnrtlrdll rdqhckedsd
      361 rlmeqqgtll krlaeadsek arlllllqdk dkeveellqe iqcekaqakt aselsksmet
      421 mrghlqaqlr ckeaensrlc mqiknlersg nqhkaeveai meqlkelkqk gerdkeslkk
      481 airaqkerae kseeyaeqlh vqladkdlyv aealstlesw rsrynqvvkd kgdleleiiv
      541 lndrvtdlvn qqqtleekmr edrdslverl hrqtaeysaf klenerlkas fapmedklnq
      601 ahievqqlka svknyegmid nyksqvmktr leadevaaql ercdkenkil kdemnkeiea
      661 arrqfqsqla dlqqlpdilk iteaklaecq dqlqgyerkn idltaiisdl rsriehqgdk
      721 lemarekhqa sqkenkqlsl kvdelerkle atsaqniefl qviakreeai hqsqlrleek
      781 trecgtlarq lesaiedarr qveqtkehaa skeraaqkki ldletqlsrt ktelsqlrrs
      841 rddadrryqs rlqdlkdrle qsestnrsmq nyvqflkssy anvfgdgpyt syltsspirs
      901 rsppt
//
LOCUS       XP_061010491             896 aa            linear   MAM 02-DEC-2023
DEFINITION  outer dense fiber protein 2 isoform X5 [Dama dama].
ACCESSION   XP_061010491
VERSION     XP_061010491.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154508.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..896
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..896
                     /product="outer dense fiber protein 2 isoform X5"
                     /calculated_mol_wt=103278
     Region          <183..850
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..896
                     /gene="ODF2"
                     /coded_by="XM_061154508.1:16..2706"
                     /db_xref="GeneID:133064430"
ORIGIN      
        1 mgelptgcrk rrrkrggvaa gaglhpprrl hgtalasdfn dfirrrfwaq pcrswfpscg
       61 kngvtsltqk kvlrtpcgap svtvtkrtmk drsstpplhv hvdentpvhv hikklsktsa
      121 tnsqkshkrg mkgdtvnvrr svrvktknpp hcleitppss eklvsvmrls dlstedddsg
      181 hckmnrydkk idslmnavgc lksevrevkm qkgerqmakr fleerkeele evaqelaete
      241 hentvlrhni ermkeekdyt mlqkkhlqqe keclmsklve aemdgaaaak qvmalkdtig
      301 klksekqmtc sdintltrqk elllqklstf eetnrtlrdl lrdqhckeds drlmeqqgtl
      361 lkrlaeadse karlllllqd kdkeveellq eiqcekaqak taselsksme tmrghlqaql
      421 rckeaensrl cmqiknlers gnqhkaevea imeqlkelkq kgerdkeslk kairaqkera
      481 ekseeyaeql hvqladkdly vaealstles wrsrynqvvk dkgdleleii vlndrvtdlv
      541 nqqqtleekm redrdslver lhrqtaeysa fklenerlka sfapmedkln qahievqqlk
      601 asvknyegmi dnyksqvmkt rleadevaaq lercdkenki lkdemnkeie aarrqfqsql
      661 adlqqlpdil kiteaklaec qdqlqgyerk nidltaiisd lrsriehqgd klemarekhq
      721 asqkenkqls lkvdelerkl eatsaqnief lqviakreea ihqsqlrlee ktrecgtlar
      781 qlesaiedar rqveqtkeha askeraaqkk ildletqlsr tktelsqlrr srddadrryq
      841 srlqdlkdrl eqsestnrsm qnyvqflkss yanvfgdgpy tsyltsspir srsppt
//
LOCUS       XP_061010493             893 aa            linear   MAM 02-DEC-2023
DEFINITION  outer dense fiber protein 2 isoform X6 [Dama dama].
ACCESSION   XP_061010493
VERSION     XP_061010493.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154510.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..893
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..893
                     /product="outer dense fiber protein 2 isoform X6"
                     /calculated_mol_wt=102893
     Region          <183..847
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..893
                     /gene="ODF2"
                     /coded_by="XM_061154510.1:16..2697"
                     /db_xref="GeneID:133064430"
ORIGIN      
        1 mgelptgcrk rrrkrggvaa gaglhpprrl hgtalasdfn dfirrrfwaq pcrswfpscg
       61 kngvtsltqk kvlrtpcgap svtvtkrtmk drsstpplhv hvdentpvhv hikklsktsa
      121 tnsqkshkrg mkgdtvnvrr svrvktknpp hcleitppss eklvsvmrls dlstedddsg
      181 hckmnrydkk idslmnavgc lksevkmqkg erqmakrfle erkeeleeva qelaetehen
      241 tvlrhnierm keekdytmlq kkhlqqekec lmsklveaem dgaaaakqvm alkdtigklk
      301 sekqmtcsdi ntltrqkell lqklstfeet nrtlrdllrd qhckedsdrl meqqgtllkr
      361 laeadsekar lllllqdkdk eveellqeiq cekaqaktas elsksmetmr ghlqaqlrck
      421 eaensrlcmq iknlersgnq hkaeveaime qlkelkqkge rdkeslkkai raqkeraeks
      481 eeyaeqlhvq ladkdlyvae alstleswrs rynqvvkdkg dleleiivln drvtdlvnqq
      541 qtleekmred rdslverlhr qtaeysafkl enerlkasfa pmedklnqah ievqqlkasv
      601 knyegmidny ksqvmktrle adevaaqler cdkenkilkd emnkeieaar rqfqsqladl
      661 qqlpdilkit eaklaecqdq lqgyerknid ltaiisdlrs riehqgdkle marekhqasq
      721 kenkqlslkv delerkleat saqnieflqv iakreeaihq sqlrleektr ecgtlarqle
      781 saiedarrqv eqtkehaask eraaqkkild letqlsrtkt elsqlrrsrd dadrryqsrl
      841 qdlkdrleqs estnrsmqny vqflkssyan vfgdgpytsy ltsspirsrs ppt
//
LOCUS       XP_061010494             871 aa            linear   MAM 02-DEC-2023
DEFINITION  outer dense fiber protein 2 isoform X7 [Dama dama].
ACCESSION   XP_061010494
VERSION     XP_061010494.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154511.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..871
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..871
                     /product="outer dense fiber protein 2 isoform X7"
                     /calculated_mol_wt=100146
     Region          <158..825
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..871
                     /gene="ODF2"
                     /coded_by="XM_061154511.1:333..2948"
                     /db_xref="GeneID:133064430"
ORIGIN      
        1 msasssggsp rfpscgkngv tsltqkkvlr tpcgapsvtv tkrtmkdrss tpplhvhvde
       61 ntpvhvhikk lsktsatnsq kshkrgmkgd tvnvrrsvrv ktkvpwmppg kssarhvgcn
      121 wenpphclei tppsseklvs vmrlsdlste dddsghckmn rydkkidslm navgclksev
      181 revkmqkger qmakrfleer keeleevaqe laetehentv lrhniermke ekdytmlqkk
      241 hlqqekeclm sklveaemdg aaaakqvmal kdtigklkse kqmtcsdint ltrqkelllq
      301 klstfeetnr tlrdllrdqh ckedsdrlme qqgtllkrla eadsekarll lllqdkdkev
      361 eellqeiqce kaqaktasel sksmetmrgh lqaqlrckea ensrlcmqik nlersgnqhk
      421 aeveaimeql kelkqkgerd keslkkaira qkeraeksee yaeqlhvqla dkdlyvaeal
      481 stleswrsry nqvvkdkgdl eleiivlndr vtdlvnqqqt leekmredrd slverlhrqt
      541 aeysafklen erlkasfapm edklnqahie vqqlkasvkn yegmidnyks qvmktrlead
      601 evaaqlercd kenkilkdem nkeieaarrq fqsqladlqq lpdilkitea klaecqdqlq
      661 gyerknidlt aiisdlrsri ehqgdklema rekhqasqke nkqlslkvde lerkleatsa
      721 qnieflqvia kreeaihqsq lrleektrec gtlarqlesa iedarrqveq tkehaasker
      781 aaqkkildle tqlsrtktel sqlrrsrdda drryqsrlqd lkdrleqses tnrsmqnyvq
      841 flkssyanvf gdgpytsylt sspirsrspp t
//
LOCUS       XP_061010495             871 aa            linear   MAM 02-DEC-2023
DEFINITION  outer dense fiber protein 2 isoform X7 [Dama dama].
ACCESSION   XP_061010495
VERSION     XP_061010495.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154512.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..871
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..871
                     /product="outer dense fiber protein 2 isoform X7"
                     /calculated_mol_wt=100146
     Region          <158..825
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..871
                     /gene="ODF2"
                     /coded_by="XM_061154512.1:327..2942"
                     /db_xref="GeneID:133064430"
ORIGIN      
        1 msasssggsp rfpscgkngv tsltqkkvlr tpcgapsvtv tkrtmkdrss tpplhvhvde
       61 ntpvhvhikk lsktsatnsq kshkrgmkgd tvnvrrsvrv ktkvpwmppg kssarhvgcn
      121 wenpphclei tppsseklvs vmrlsdlste dddsghckmn rydkkidslm navgclksev
      181 revkmqkger qmakrfleer keeleevaqe laetehentv lrhniermke ekdytmlqkk
      241 hlqqekeclm sklveaemdg aaaakqvmal kdtigklkse kqmtcsdint ltrqkelllq
      301 klstfeetnr tlrdllrdqh ckedsdrlme qqgtllkrla eadsekarll lllqdkdkev
      361 eellqeiqce kaqaktasel sksmetmrgh lqaqlrckea ensrlcmqik nlersgnqhk
      421 aeveaimeql kelkqkgerd keslkkaira qkeraeksee yaeqlhvqla dkdlyvaeal
      481 stleswrsry nqvvkdkgdl eleiivlndr vtdlvnqqqt leekmredrd slverlhrqt
      541 aeysafklen erlkasfapm edklnqahie vqqlkasvkn yegmidnyks qvmktrlead
      601 evaaqlercd kenkilkdem nkeieaarrq fqsqladlqq lpdilkitea klaecqdqlq
      661 gyerknidlt aiisdlrsri ehqgdklema rekhqasqke nkqlslkvde lerkleatsa
      721 qnieflqvia kreeaihqsq lrleektrec gtlarqlesa iedarrqveq tkehaasker
      781 aaqkkildle tqlsrtktel sqlrrsrdda drryqsrlqd lkdrleqses tnrsmqnyvq
      841 flkssyanvf gdgpytsylt sspirsrspp t
//
LOCUS       XP_061010496             868 aa            linear   MAM 02-DEC-2023
DEFINITION  outer dense fiber protein 2 isoform X8 [Dama dama].
ACCESSION   XP_061010496
VERSION     XP_061010496.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154513.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..868
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..868
                     /product="outer dense fiber protein 2 isoform X8"
                     /calculated_mol_wt=99762
     Region          <158..822
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..868
                     /gene="ODF2"
                     /coded_by="XM_061154513.1:333..2939"
                     /db_xref="GeneID:133064430"
ORIGIN      
        1 msasssggsp rfpscgkngv tsltqkkvlr tpcgapsvtv tkrtmkdrss tpplhvhvde
       61 ntpvhvhikk lsktsatnsq kshkrgmkgd tvnvrrsvrv ktkvpwmppg kssarhvgcn
      121 wenpphclei tppsseklvs vmrlsdlste dddsghckmn rydkkidslm navgclksev
      181 kmqkgerqma krfleerkee leevaqelae tehentvlrh niermkeekd ytmlqkkhlq
      241 qekeclmskl veaemdgaaa akqvmalkdt igklksekqm tcsdintltr qkelllqkls
      301 tfeetnrtlr dllrdqhcke dsdrlmeqqg tllkrlaead sekarlllll qdkdkeveel
      361 lqeiqcekaq aktaselsks metmrghlqa qlrckeaens rlcmqiknle rsgnqhkaev
      421 eaimeqlkel kqkgerdkes lkkairaqke raekseeyae qlhvqladkd lyvaealstl
      481 eswrsrynqv vkdkgdlele iivlndrvtd lvnqqqtlee kmredrdslv erlhrqtaey
      541 safklenerl kasfapmedk lnqahievqq lkasvknyeg midnyksqvm ktrleadeva
      601 aqlercdken kilkdemnke ieaarrqfqs qladlqqlpd ilkiteakla ecqdqlqgye
      661 rknidltaii sdlrsriehq gdklemarek hqasqkenkq lslkvdeler kleatsaqni
      721 eflqviakre eaihqsqlrl eektrecgtl arqlesaied arrqveqtke haaskeraaq
      781 kkildletql srtktelsql rrsrddadrr yqsrlqdlkd rleqsestnr smqnyvqflk
      841 ssyanvfgdg pytsyltssp irsrsppt
//
LOCUS       XP_061010497             827 aa            linear   MAM 02-DEC-2023
DEFINITION  outer dense fiber protein 2 isoform X9 [Dama dama].
ACCESSION   XP_061010497
VERSION     XP_061010497.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154514.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..827
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..827
                     /product="outer dense fiber protein 2 isoform X9"
                     /calculated_mol_wt=95696
     Region          <114..781
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..827
                     /gene="ODF2"
                     /coded_by="XM_061154514.1:186..2669"
                     /db_xref="GeneID:133064430"
ORIGIN      
        1 mkdrsstppl hvhvdentpv hvhikklskt satnsqkshk rgmkgdtvnv rrsvrvktkv
       61 pwmppgkssa rhvgcnwenp phcleitpps seklvsvmrl sdlsteddds ghckmnrydk
      121 kidslmnavg clksevrevk mqkgerqmak rfleerkeel eevaqelaet ehentvlrhn
      181 iermkeekdy tmlqkkhlqq ekeclmsklv eaemdgaaaa kqvmalkdti gklksekqmt
      241 csdintltrq kelllqklst feetnrtlrd llrdqhcked sdrlmeqqgt llkrlaeads
      301 ekarlllllq dkdkeveell qeiqcekaqa ktaselsksm etmrghlqaq lrckeaensr
      361 lcmqiknler sgnqhkaeve aimeqlkelk qkgerdkesl kkairaqker aekseeyaeq
      421 lhvqladkdl yvaealstle swrsrynqvv kdkgdlelei ivlndrvtdl vnqqqtleek
      481 mredrdslve rlhrqtaeys afklenerlk asfapmedkl nqahievqql kasvknyegm
      541 idnyksqvmk trleadevaa qlercdkenk ilkdemnkei eaarrqfqsq ladlqqlpdi
      601 lkiteaklae cqdqlqgyer knidltaiis dlrsriehqg dklemarekh qasqkenkql
      661 slkvdelerk leatsaqnie flqviakree aihqsqlrle ektrecgtla rqlesaieda
      721 rrqveqtkeh aaskeraaqk kildletqls rtktelsqlr rsrddadrry qsrlqdlkdr
      781 leqsestnrs mqnyvqflks syanvfgdgp ytsyltsspi rsrsppt
//
LOCUS       XP_061010498             827 aa            linear   MAM 02-DEC-2023
DEFINITION  outer dense fiber protein 2 isoform X9 [Dama dama].
ACCESSION   XP_061010498
VERSION     XP_061010498.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154515.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..827
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..827
                     /product="outer dense fiber protein 2 isoform X9"
                     /calculated_mol_wt=95696
     Region          <114..781
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..827
                     /gene="ODF2"
                     /coded_by="XM_061154515.1:166..2649"
                     /db_xref="GeneID:133064430"
ORIGIN      
        1 mkdrsstppl hvhvdentpv hvhikklskt satnsqkshk rgmkgdtvnv rrsvrvktkv
       61 pwmppgkssa rhvgcnwenp phcleitpps seklvsvmrl sdlsteddds ghckmnrydk
      121 kidslmnavg clksevrevk mqkgerqmak rfleerkeel eevaqelaet ehentvlrhn
      181 iermkeekdy tmlqkkhlqq ekeclmsklv eaemdgaaaa kqvmalkdti gklksekqmt
      241 csdintltrq kelllqklst feetnrtlrd llrdqhcked sdrlmeqqgt llkrlaeads
      301 ekarlllllq dkdkeveell qeiqcekaqa ktaselsksm etmrghlqaq lrckeaensr
      361 lcmqiknler sgnqhkaeve aimeqlkelk qkgerdkesl kkairaqker aekseeyaeq
      421 lhvqladkdl yvaealstle swrsrynqvv kdkgdlelei ivlndrvtdl vnqqqtleek
      481 mredrdslve rlhrqtaeys afklenerlk asfapmedkl nqahievqql kasvknyegm
      541 idnyksqvmk trleadevaa qlercdkenk ilkdemnkei eaarrqfqsq ladlqqlpdi
      601 lkiteaklae cqdqlqgyer knidltaiis dlrsriehqg dklemarekh qasqkenkql
      661 slkvdelerk leatsaqnie flqviakree aihqsqlrle ektrecgtla rqlesaieda
      721 rrqveqtkeh aaskeraaqk kildletqls rtktelsqlr rsrddadrry qsrlqdlkdr
      781 leqsestnrs mqnyvqflks syanvfgdgp ytsyltsspi rsrsppt
//
LOCUS       XP_061010499             751 aa            linear   MAM 02-DEC-2023
DEFINITION  outer dense fiber protein 2 isoform X10 [Dama dama].
ACCESSION   XP_061010499
VERSION     XP_061010499.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154516.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..751
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..751
                     /product="outer dense fiber protein 2 isoform X10"
                     /calculated_mol_wt=87210
     Region          <38..705
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..751
                     /gene="ODF2"
                     /coded_by="XM_061154516.1:80..2335"
                     /db_xref="GeneID:133064430"
ORIGIN      
        1 mrnpphclei tppsseklvs vmrlsdlste dddsghckmn rydkkidslm navgclksev
       61 revkmqkger qmakrfleer keeleevaqe laetehentv lrhniermke ekdytmlqkk
      121 hlqqekeclm sklveaemdg aaaakqvmal kdtigklkse kqmtcsdint ltrqkelllq
      181 klstfeetnr tlrdllrdqh ckedsdrlme qqgtllkrla eadsekarll lllqdkdkev
      241 eellqeiqce kaqaktasel sksmetmrgh lqaqlrckea ensrlcmqik nlersgnqhk
      301 aeveaimeql kelkqkgerd keslkkaira qkeraeksee yaeqlhvqla dkdlyvaeal
      361 stleswrsry nqvvkdkgdl eleiivlndr vtdlvnqqqt leekmredrd slverlhrqt
      421 aeysafklen erlkasfapm edklnqahie vqqlkasvkn yegmidnyks qvmktrlead
      481 evaaqlercd kenkilkdem nkeieaarrq fqsqladlqq lpdilkitea klaecqdqlq
      541 gyerknidlt aiisdlrsri ehqgdklema rekhqasqke nkqlslkvde lerkleatsa
      601 qnieflqvia kreeaihqsq lrleektrec gtlarqlesa iedarrqveq tkehaasker
      661 aaqkkildle tqlsrtktel sqlrrsrdda drryqsrlqd lkdrleqses tnrsmqnyvq
      721 flkssyanvf gdgpytsylt sspirsrspp t
//
LOCUS       XP_061010500             849 aa            linear   MAM 02-DEC-2023
DEFINITION  outer dense fiber protein 2 isoform X11 [Dama dama].
ACCESSION   XP_061010500
VERSION     XP_061010500.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154517.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..849
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..849
                     /product="outer dense fiber protein 2 isoform X11"
                     /calculated_mol_wt=97641
     Region          <139..803
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..849
                     /gene="ODF2"
                     /coded_by="XM_061154517.1:333..2882"
                     /db_xref="GeneID:133064430"
ORIGIN      
        1 msasssggsp rfpscgkngv tsltqkkvlr tpcgapsvtv tkrtmkdrss tpplhvhvde
       61 ntpvhvhikk lsktsatnsq kshkrgmkgd tvnvrrsvrv ktknpphcle itppsseklv
      121 svmrlsdlst edddsghckm nrydkkidsl mnavgclkse vkmqkgerqm akrfleerke
      181 eleevaqela etehentvlr hniermkeek dytmlqkkhl qqekeclmsk lveaemdgaa
      241 aakqvmalkd tigklksekq mtcsdintlt rqkelllqkl stfeetnrtl rdllrdqhck
      301 edsdrlmeqq gtllkrlaea dsekarllll lqdkdkevee llqeiqceka qaktaselsk
      361 smetmrghlq aqlrckeaen srlcmqiknl ersgnqhkae veaimeqlke lkqkgerdke
      421 slkkairaqk eraekseeya eqlhvqladk dlyvaealst leswrsrynq vvkdkgdlel
      481 eiivlndrvt dlvnqqqtle ekmredrdsl verlhrqtae ysafklener lkasfapmed
      541 klnqahievq qlkasvknye gmidnyksqv mktrleadev aaqlercdke nkilkdemnk
      601 eieaarrqfq sqladlqqlp dilkiteakl aecqdqlqgy erknidltai isdlrsrieh
      661 qgdklemare khqasqkenk qlslkvdele rkleatsaqn ieflqviakr eeaihqsqlr
      721 leektrecgt larqlesaie darrqveqtk ehaaskeraa qkkildletq lsrtktelsq
      781 lrrsrddadr ryqsrlqdlk drleqsestn rsmqnyvqfl kssyanvfgd gpytsyltss
      841 pirsrsppt
//
LOCUS       XP_061010501             595 aa            linear   MAM 02-DEC-2023
DEFINITION  inactive glycosyltransferase 25 family member 3 isoform X1 [Dama
            dama].
ACCESSION   XP_061010501
VERSION     XP_061010501.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154518.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..595
                     /product="inactive glycosyltransferase 25 family member 3
                     isoform X1"
                     /calculated_mol_wt=67519
     Region          25..>159
                     /region_name="BcsA"
                     /note="Glycosyltransferase, catalytic subunit of cellulose
                     synthase and poly-beta-1,6-N-acetylglucosamine synthase
                     [Cell motility]; COG1215"
                     /db_xref="CDD:440828"
     Region          37..>89
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
     Region          322..535
                     /region_name="COG3306"
                     /note="Glycosyltransferase involved in LPS biosynthesis,
                     GR25 family [Cell wall/membrane/envelope biogenesis]"
                     /db_xref="CDD:442535"
     CDS             1..595
                     /gene="CERCAM"
                     /coded_by="XM_061154518.1:9..1796"
                     /db_xref="GeneID:133064432"
ORIGIN      
        1 mraaraapll qlllllgprl eaagaaeppl ptvvlailar naehslphyl galerldypr
       61 arlalwcatd hnvdntteml rewlaavghd yaaviwrpeg eprsypdeeg pkhwtkerhq
      121 flmelkqeal tfardwgady ilfadtdnil tnnqtlqlli eqglpvvapm ldsqtyysnf
      181 wcgitpqgyy rrtadyfptk nrqrrgcfhv pmvhstflvs lraegtaqla fypphpnytw
      241 pfddiivfay acqaagvsvh vcneqrygyl nvpvqshqgl edervnfihl ilealvdgpp
      301 mwasahvsrp pkrpskmgfd evfvislarr pdrrermlts lwemeisgrv vdavdgrmln
      361 ssvmrtlgvd llpgyqdpys grtltkgevg cflshysiwe evvaqgltrv vvfeddvrfe
      421 snfkgrlerl meeveaeklp wdliylgrkq vnpeeeavve glpnlvvagy sywtlayvls
      481 lagarkllas qplrrmlpvd eflpimfdqh pneqykahfw prdlqafsar pllaapthya
      541 gdaewlsdte tsspwdddsg rliswtgsyk tlrgprldla gssghslhph prdel
//
LOCUS       XP_061010502             517 aa            linear   MAM 02-DEC-2023
DEFINITION  inactive glycosyltransferase 25 family member 3 isoform X2 [Dama
            dama].
ACCESSION   XP_061010502
VERSION     XP_061010502.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154519.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..517
                     /product="inactive glycosyltransferase 25 family member 3
                     isoform X2"
                     /calculated_mol_wt=59063
     Region          244..457
                     /region_name="COG3306"
                     /note="Glycosyltransferase involved in LPS biosynthesis,
                     GR25 family [Cell wall/membrane/envelope biogenesis]"
                     /db_xref="CDD:442535"
     CDS             1..517
                     /gene="CERCAM"
                     /coded_by="XM_061154519.1:224..1777"
                     /db_xref="GeneID:133064432"
ORIGIN      
        1 mlrewlaavg hdyaaviwrp egeprsypde egpkhwtker hqflmelkqe altfardwga
       61 dyilfadtdn iltnnqtlql lieqglpvva pmldsqtyys nfwcgitpqg yyrrtadyfp
      121 tknrqrrgcf hvpmvhstfl vslraegtaq lafypphpny twpfddiivf ayacqaagvs
      181 vhvcneqryg ylnvpvqshq gledervnfi hlilealvdg ppmwasahvs rppkrpskmg
      241 fdevfvisla rrpdrrerml tslwemeisg rvvdavdgrm lnssvmrtlg vdllpgyqdp
      301 ysgrtltkge vgcflshysi weevvaqglt rvvvfeddvr fesnfkgrle rlmeeveaek
      361 lpwdliylgr kqvnpeeeav veglpnlvva gysywtlayv lslagarkll asqplrrmlp
      421 vdeflpimfd qhpneqykah fwprdlqafs arpllaapth yagdaewlsd tetsspwddd
      481 sgrliswtgs yktlrgprld lagssghslh phprdel
//
LOCUS       XP_061010503             517 aa            linear   MAM 02-DEC-2023
DEFINITION  inactive glycosyltransferase 25 family member 3 isoform X2 [Dama
            dama].
ACCESSION   XP_061010503
VERSION     XP_061010503.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154520.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..517
                     /product="inactive glycosyltransferase 25 family member 3
                     isoform X2"
                     /calculated_mol_wt=59063
     Region          244..457
                     /region_name="COG3306"
                     /note="Glycosyltransferase involved in LPS biosynthesis,
                     GR25 family [Cell wall/membrane/envelope biogenesis]"
                     /db_xref="CDD:442535"
     CDS             1..517
                     /gene="CERCAM"
                     /coded_by="XM_061154520.1:169..1722"
                     /db_xref="GeneID:133064432"
ORIGIN      
        1 mlrewlaavg hdyaaviwrp egeprsypde egpkhwtker hqflmelkqe altfardwga
       61 dyilfadtdn iltnnqtlql lieqglpvva pmldsqtyys nfwcgitpqg yyrrtadyfp
      121 tknrqrrgcf hvpmvhstfl vslraegtaq lafypphpny twpfddiivf ayacqaagvs
      181 vhvcneqryg ylnvpvqshq gledervnfi hlilealvdg ppmwasahvs rppkrpskmg
      241 fdevfvisla rrpdrrerml tslwemeisg rvvdavdgrm lnssvmrtlg vdllpgyqdp
      301 ysgrtltkge vgcflshysi weevvaqglt rvvvfeddvr fesnfkgrle rlmeeveaek
      361 lpwdliylgr kqvnpeeeav veglpnlvva gysywtlayv lslagarkll asqplrrmlp
      421 vdeflpimfd qhpneqykah fwprdlqafs arpllaapth yagdaewlsd tetsspwddd
      481 sgrliswtgs yktlrgprld lagssghslh phprdel
//
LOCUS       XP_061010504             643 aa            linear   MAM 02-DEC-2023
DEFINITION  long-chain fatty acid transport protein 4 [Dama dama].
ACCESSION   XP_061010504
VERSION     XP_061010504.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154521.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..643
                     /product="long-chain fatty acid transport protein 4"
                     /calculated_mol_wt=72336
     Region          99..608
                     /region_name="hsFATP4_like"
                     /note="Fatty acid transport proteins (FATP), including
                     FATP4 and FATP1, and similar proteins; cd05939"
                     /db_xref="CDD:341262"
     Site            order(243,246..251,253..254)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341262"
     Site            order(246,361..362,382..387,489,501,504,515,595)
                     /site_type="other"
                     /note="putative AMP binding site [chemical binding]"
                     /db_xref="CDD:341262"
     Site            order(246,286..287,343,345..346,349,361..362,382..387,489,
                     501,504,512..515,576)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:341262"
     Site            order(286,345..346,349,361,512..514,567,576)
                     /site_type="other"
                     /note="putative CoA binding site [chemical binding]"
                     /db_xref="CDD:341262"
     CDS             1..643
                     /gene="SLC27A4"
                     /coded_by="XM_061154521.1:165..2096"
                     /db_xref="GeneID:133064434"
ORIGIN      
        1 mllgasllgv llfswlvlkl pwtqvgcslf flylgsggwr firifiktvr rdifggtvll
       61 rvkakvrryl rerrtvpmlf aatvqrhpdk talifegtdt hwtfrqlddy snsvanflqa
      121 qglasgnvva lfmenrnefv glwlgmaklg veaalintnl rrdallhclt ssqaralvfg
      181 semapavlei hanldpslnl fcsgpwepst vptgtnhldp lledapkhqp srpnkgfvdk
      241 lfyiytsgtt glpkaaivvh sryyrmaalv yygfrmrpdd iiydclplyh sagnivgmgq
      301 clihgmtvvi rkkfsasrfw ddcikyncti vqyigelcry llnqppreae nrhrvrmalg
      361 nglrqsiwtd frsrfhipqv aefygatecn cslgnfdgqv gacgfnsril sfvypirlvr
      421 vnedtmelir gpdglcipck pgepgqlvgi iiqrdplrrf dgylnqgann kkiaqdvfkk
      481 gdqaylsgdv lvmdelgyly frdrtgdtfr wkgenvstte vegtlsrlld madvavygve
      541 vpgtegragm aavasssgsc dlehlaqllq kelplyarpi flrflpelhk tgtfklqkte
      601 lrkegfdptv vkdqlfylda rkgryvpldq eaytriqagq ekl
//
LOCUS       XP_061010506             116 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin-related modifier 1 isoform X1 [Dama dama].
ACCESSION   XP_061010506
VERSION     XP_061010506.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154523.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..116
                     /product="ubiquitin-related modifier 1 isoform X1"
                     /calculated_mol_wt=12952
     Region          7..116
                     /region_name="Ubl_Urm1"
                     /note="ubiquitin-like (Ubl) domain found in
                     ubiquitin-related modifier 1 (Urm1); cd01764"
                     /db_xref="CDD:340463"
     CDS             1..116
                     /gene="URM1"
                     /coded_by="XM_061154523.1:66..416"
                     /db_xref="GeneID:133064435"
ORIGIN      
        1 maaplsveve fgggaellfd gvkkhqvtlp gqeepwdirs llvwikknll kerpelfiqg
       61 dsvschprpa thhrlsyrrp gilvlvndad wellgeldyq lqdqdsvlfi stlhgg
//
LOCUS       XP_061010507             112 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin-related modifier 1 isoform X2 [Dama dama].
ACCESSION   XP_061010507
VERSION     XP_061010507.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154524.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..112
                     /product="ubiquitin-related modifier 1 isoform X2"
                     /calculated_mol_wt=12792
     Region          8..112
                     /region_name="Ubl_Urm1"
                     /note="ubiquitin-like (Ubl) domain found in
                     ubiquitin-related modifier 1 (Urm1); cd01764"
                     /db_xref="CDD:340463"
     CDS             1..112
                     /gene="URM1"
                     /coded_by="XM_061154524.1:183..521"
                     /db_xref="GeneID:133064435"
ORIGIN      
        1 mrtprswrgg aellfdgvkk hqvtlpgqee pwdirsllvw ikknllkerp elfiqgdsvs
       61 chprpathhr lsyrrpgilv lvndadwell geldyqlqdq dsvlfistlh gg
//
LOCUS       XP_061010508             101 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin-related modifier 1 isoform X3 [Dama dama].
ACCESSION   XP_061010508
VERSION     XP_061010508.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154525.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..101
                     /product="ubiquitin-related modifier 1 isoform X3"
                     /calculated_mol_wt=11152
     Region          7..101
                     /region_name="Ubl_Urm1"
                     /note="ubiquitin-like (Ubl) domain found in
                     ubiquitin-related modifier 1 (Urm1); cd01764"
                     /db_xref="CDD:340463"
     CDS             1..101
                     /gene="URM1"
                     /coded_by="XM_061154525.1:66..371"
                     /db_xref="GeneID:133064435"
ORIGIN      
        1 maaplsveve fgggaellfd gvkkhqvtlp gqeepwdirs llvwikknll kerpelfiqg
       61 dsvrpgilvl vndadwellg eldyqlqdqd svlfistlhg g
//
LOCUS       XP_061010509             330 aa            linear   MAM 02-DEC-2023
DEFINITION  pseudouridylate synthase TRUB2, mitochondrial isoform X1 [Dama
            dama].
ACCESSION   XP_061010509
VERSION     XP_061010509.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154526.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..330
                     /product="pseudouridylate synthase TRUB2, mitochondrial
                     isoform X1"
                     /calculated_mol_wt=36405
     Region          11..282
                     /region_name="PseudoU_synth_hTruB2_like"
                     /note="Pseudouridine synthase, humanTRUB2_like; cd02868"
                     /db_xref="CDD:211345"
     Site            order(94..97,235)
                     /site_type="active"
                     /note="probable active site [active]"
                     /db_xref="CDD:211345"
     CDS             1..330
                     /gene="TRUB2"
                     /coded_by="XM_061154526.1:59..1051"
                     /db_xref="GeneID:133064436"
ORIGIN      
        1 mgsaglarlq glfavykppg lkwkhlrdtv elqllkglna gkppapkqrv rfllgpvegs
       61 eeeltltatr vptlidhplv rglaftslkv gvghrldsqa sgvlvlgvgh grglltdmyn
      121 ahltkdytvr gvlgkatddf cedgrlvekt tydhvtrekl drilaviqgs hqkalvtysn
      181 ldlqtqeaye mavsgvirpm nkspmlitgi rclqfappef llevqcmhet qkqlrrlvhe
      241 iglelkstav ctqvrrtrdg fftlddallr tqwdlasiqd aiqaaaprvv aelekslrpw
      301 lgiqeppgpg qpwdserprf algpeshvgh
//
LOCUS       XP_061010510             305 aa            linear   MAM 02-DEC-2023
DEFINITION  pseudouridylate synthase TRUB2, mitochondrial isoform X2 [Dama
            dama].
ACCESSION   XP_061010510
VERSION     XP_061010510.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154527.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..305
                     /product="pseudouridylate synthase TRUB2, mitochondrial
                     isoform X2"
                     /calculated_mol_wt=33855
     Region          11..257
                     /region_name="PseudoU_synth_hTruB2_like"
                     /note="Pseudouridine synthase, humanTRUB2_like; cd02868"
                     /db_xref="CDD:211345"
     Site            order(70..72,210)
                     /site_type="active"
                     /note="probable active site [active]"
                     /db_xref="CDD:211345"
     CDS             1..305
                     /gene="TRUB2"
                     /coded_by="XM_061154527.1:60..977"
                     /db_xref="GeneID:133064436"
ORIGIN      
        1 mgsaglarlq glfavykppg lkwkhlrdtv elqllkglna gkppapkqrv rfllgpvegs
       61 eeeltltatr vptlidhplv lgvghgrgll tdmynahltk dytvrgvlgk atddfcedgr
      121 lvekttydhv trekldrila viqgshqkal vtysnldlqt qeayemavsg virpmnkspm
      181 litgirclqf appefllevq cmhetqkqlr rlvheiglel kstavctqvr rtrdgfftld
      241 dallrtqwdl asiqdaiqaa aprvvaelek slrpwlgiqe ppgpgqpwds erprfalgpe
      301 shvgh
//
LOCUS       XP_061010511             285 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquinone biosynthesis protein COQ4 homolog, mitochondrial isoform
            X1 [Dama dama].
ACCESSION   XP_061010511
VERSION     XP_061010511.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154528.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..285
                     /product="ubiquinone biosynthesis protein COQ4 homolog,
                     mitochondrial isoform X1"
                     /calculated_mol_wt=31739
     Region          46..278
                     /region_name="Coq4"
                     /note="Coenzyme Q (ubiquinone) biosynthesis protein Coq4;
                     pfam05019"
                     /db_xref="CDD:461522"
     CDS             1..285
                     /gene="COQ4"
                     /coded_by="XM_061154528.1:323..1180"
                     /db_xref="GeneID:133064437"
ORIGIN      
        1 matllrgllr plcafrgspg sstgvplrav shgagllype hiptsplqkv llaagsagma
       61 lydpyrhdmv avlgettghr tlkvlrdqmk rdpegaqilq erprislstl dmgklrglpe
      121 gsfgcaylrf ldvnvfsgrg mticmedfiq cwhirvspdt raptrfvdde elayviqryr
      181 eihdmlhtll gmptnilgei vvkwfeavqt glpmcilsal fgpiqlsaqs lrlliselip
      241 wavengrrap cvlnvyyerr weqplqalrq elgitepplr veglv
//
LOCUS       XP_061010512             265 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquinone biosynthesis protein COQ4 homolog, mitochondrial isoform
            X2 [Dama dama].
ACCESSION   XP_061010512
VERSION     XP_061010512.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154529.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..265
                     /product="ubiquinone biosynthesis protein COQ4 homolog,
                     mitochondrial isoform X2"
                     /calculated_mol_wt=29383
     Region          46..258
                     /region_name="Coq4"
                     /note="Coenzyme Q (ubiquinone) biosynthesis protein Coq4;
                     pfam05019"
                     /db_xref="CDD:461522"
     CDS             1..265
                     /gene="COQ4"
                     /coded_by="XM_061154529.1:321..1118"
                     /db_xref="GeneID:133064437"
ORIGIN      
        1 matllrgllr plcafrgspg sstgvplrav shgagllype hiptsplqkv llaagsagma
       61 lydpyrhdmv avlgettghr tlkvlrdqmk rdpegaqilq erprislstl dmgklrglpe
      121 gsfgcaylrf ldvnrvspdt raptrfvdde elayviqryr eihdmlhtll gmptnilgei
      181 vvkwfeavqt glpmcilsal fgpiqlsaqs lrlliselip wavengrrap cvlnvyyerr
      241 weqplqalrq elgitepplr veglv
//
LOCUS       XP_061010513            1032 aa            linear   MAM 02-DEC-2023
DEFINITION  golgin subfamily A member 2 isoform X1 [Dama dama].
ACCESSION   XP_061010513
VERSION     XP_061010513.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154530.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1032
                     /product="golgin subfamily A member 2 isoform X1"
                     /calculated_mol_wt=116043
     Region          262..>492
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          414..937
                     /region_name="GOLGA2L5"
                     /note="Putative golgin subfamily A member 2-like protein
                     5; pfam15070"
                     /db_xref="CDD:464485"
     Region          983..1028
                     /region_name="GM130_C"
                     /note="GM130 C-terminal binding motif; pfam19046"
                     /db_xref="CDD:465957"
     CDS             1..1032
                     /gene="GOLGA2"
                     /coded_by="XM_061154530.1:56..3154"
                     /db_xref="GeneID:133064438"
ORIGIN      
        1 mwpplppprp gmseetrqsk laaakkklre yqqknspgvp agakkkrkik ngsspettts
       61 gdcpspediq dilevlvsdl nrsngvaipp ldkwkapkdc aapvtpsadd tvspggvpsp
      121 saspprvtsm astqnhdadn ssgpidests fssteslrql sqqlnglvse sssyingegl
      181 aspaniknle sryqelsval dssnltnkql sskieelkqe nqetldqlek ekkefeqkla
      241 keqgalreql qvhiqtigil vsektelqta lvhtqqaarq kagesedlan rlqssrqrvg
      301 elertlsavs tqqkqadryn keltrerdal klelyknnkn nedlkqqnse leeklrllvi
      361 eksamqlgve elqkklemse lllqqfssqp apdssqqlqq aleeraqlet hveqlkdslk
      421 qlqaerdqyv tnlkeenaiw qqkmqqvleq msklkeeker svsqaqelet slaelrnqia
      481 apqpqeppag pseteqwlqa eterlqkele slagqlqaqv kdneslshln qeqeqrllel
      541 ereaecwgeq aeerkqiles mqsdrttisr alsqnrelke qlaelqngfv rlsnenmeit
      601 salqseqhvk kelakklgql qeklgelket vevkgqevqd lqqqrdeyln hlqqyvaayq
      661 qhvaayqqla sekealhkqv llqtqlldrl qheevqgkva mevarqelqe tqerleaanq
      721 qnqqlqaqlt lmavpgegdg ldseeqdeea prpklsvpee lesrealvef fhsalasaed
      781 eqarlrgqlk eqklrcqrls hlavaaqdrv eketpaprig gdsvpaeahq alqvamdklq
      841 grftelmqek vdlkerveel ehrciqlsge tdtigeyial yqsqravlka rhqekeeyis
      901 rlaqdkeemk vkllelqelv lrlvgernew ygkflaaqnp agepttapat cqepgtadne
      961 gglqevslad nvespqgalp gqatsenpta qqimqllrei qnpqehpglg snpcipffyr
     1021 addndevkim vi
//
LOCUS       XP_061010514            1005 aa            linear   MAM 02-DEC-2023
DEFINITION  golgin subfamily A member 2 isoform X2 [Dama dama].
ACCESSION   XP_061010514
VERSION     XP_061010514.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154531.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1005
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1005
                     /product="golgin subfamily A member 2 isoform X2"
                     /calculated_mol_wt=113027
     Region          235..>465
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          387..910
                     /region_name="GOLGA2L5"
                     /note="Putative golgin subfamily A member 2-like protein
                     5; pfam15070"
                     /db_xref="CDD:464485"
     Region          956..1001
                     /region_name="GM130_C"
                     /note="GM130 C-terminal binding motif; pfam19046"
                     /db_xref="CDD:465957"
     CDS             1..1005
                     /gene="GOLGA2"
                     /coded_by="XM_061154531.1:16..3033"
                     /db_xref="GeneID:133064438"
ORIGIN      
        1 mwpplppprp gmseetrqsk laaakkklre yqqknspgvp agakkkrkik ngsspettts
       61 gdcpspedap kdcaapvtps addtvspggv pspsaspprv tsmastqnhd adnssgpide
      121 stsfsstesl rqlsqqlngl vsesssying eglaspanik nlesryqels valdssnltn
      181 kqlsskieel kqenqetldq lekekkefeq klakeqgalr eqlqvhiqti gilvsektel
      241 qtalvhtqqa arqkagesed lanrlqssrq rvgelertls avstqqkqad rynkeltrer
      301 dalklelykn nknnedlkqq nseleeklrl lvieksamql gveelqkkle mselllqqfs
      361 sqpapdssqq lqqaleeraq lethveqlkd slkqlqaerd qyvtnlkeen aiwqqkmqqv
      421 leqmsklkee kersvsqaqe letslaelrn qiaapqpqep pagpseteqw lqaeterlqk
      481 eleslagqlq aqvkdnesls hlnqeqeqrl lelereaecw geqaeerkqi lesmqsdrtt
      541 isralsqnre lkeqlaelqn gfvrlsnenm eitsalqseq hvkkelakkl gqlqeklgel
      601 ketvevkgqe vqdlqqqrde ylnhlqqyva ayqqhvaayq qlasekealh kqvllqtqll
      661 drlqheevqg kvamevarqe lqetqerlea anqqnqqlqa qltlmavpge gdgldseeqd
      721 eeaprpklsv peelesreal veffhsalas aedeqarlrg qlkeqklrcq rlshlavaaq
      781 drveketpap riggdsvpae ahqalqvamd klqgrftelm qekvdlkerv eelehrciql
      841 sgetdtigey ialyqsqrav lkarhqekee yisrlaqdke emkvkllelq elvlrlvger
      901 newygkflaa qnpageptta patcqepgta dnegglqevs ladnvespqg alpgqatsen
      961 ptaqqimqll reiqnpqehp glgsnpcipf fyraddndev kimvi
//
LOCUS       XP_061010515            1005 aa            linear   MAM 02-DEC-2023
DEFINITION  golgin subfamily A member 2 isoform X3 [Dama dama].
ACCESSION   XP_061010515
VERSION     XP_061010515.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154532.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1005
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1005
                     /product="golgin subfamily A member 2 isoform X3"
                     /calculated_mol_wt=113007
     Region          235..>465
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          387..910
                     /region_name="GOLGA2L5"
                     /note="Putative golgin subfamily A member 2-like protein
                     5; pfam15070"
                     /db_xref="CDD:464485"
     Region          956..1001
                     /region_name="GM130_C"
                     /note="GM130 C-terminal binding motif; pfam19046"
                     /db_xref="CDD:465957"
     CDS             1..1005
                     /gene="GOLGA2"
                     /coded_by="XM_061154532.1:16..3033"
                     /db_xref="GeneID:133064438"
ORIGIN      
        1 mwpplppprp gmseetrqsk laaakkklre yqqknspgvp agakkkrkik ngsspettts
       61 gdcpspediq dilevlvsdl nrsngvaipp ldkwkapkdc aapvtpsadd tvspggvpsp
      121 saspprvtsm astqnhdadn ssgpidests fssteslrql sqqlnglvse sssyingegl
      181 aspaniknle kqenqetldq lekekkefeq klakeqgalr eqlqvhiqti gilvsektel
      241 qtalvhtqqa arqkagesed lanrlqssrq rvgelertls avstqqkqad rynkeltrer
      301 dalklelykn nknnedlkqq nseleeklrl lvieksamql gveelqkkle mselllqqfs
      361 sqpapdssqq lqqaleeraq lethveqlkd slkqlqaerd qyvtnlkeen aiwqqkmqqv
      421 leqmsklkee kersvsqaqe letslaelrn qiaapqpqep pagpseteqw lqaeterlqk
      481 eleslagqlq aqvkdnesls hlnqeqeqrl lelereaecw geqaeerkqi lesmqsdrtt
      541 isralsqnre lkeqlaelqn gfvrlsnenm eitsalqseq hvkkelakkl gqlqeklgel
      601 ketvevkgqe vqdlqqqrde ylnhlqqyva ayqqhvaayq qlasekealh kqvllqtqll
      661 drlqheevqg kvamevarqe lqetqerlea anqqnqqlqa qltlmavpge gdgldseeqd
      721 eeaprpklsv peelesreal veffhsalas aedeqarlrg qlkeqklrcq rlshlavaaq
      781 drveketpap riggdsvpae ahqalqvamd klqgrftelm qekvdlkerv eelehrciql
      841 sgetdtigey ialyqsqrav lkarhqekee yisrlaqdke emkvkllelq elvlrlvger
      901 newygkflaa qnpageptta patcqepgta dnegglqevs ladnvespqg alpgqatsen
      961 ptaqqimqll reiqnpqehp glgsnpcipf fyraddndev kimvi
//
LOCUS       XP_061010516             993 aa            linear   MAM 02-DEC-2023
DEFINITION  golgin subfamily A member 2 isoform X4 [Dama dama].
ACCESSION   XP_061010516
VERSION     XP_061010516.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154533.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..993
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..993
                     /product="golgin subfamily A member 2 isoform X4"
                     /calculated_mol_wt=112323
     Region          <207..525
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          375..898
                     /region_name="GOLGA2L5"
                     /note="Putative golgin subfamily A member 2-like protein
                     5; pfam15070"
                     /db_xref="CDD:464485"
     Region          944..989
                     /region_name="GM130_C"
                     /note="GM130 C-terminal binding motif; pfam19046"
                     /db_xref="CDD:465957"
     CDS             1..993
                     /gene="GOLGA2"
                     /coded_by="XM_061154533.1:16..2997"
                     /db_xref="GeneID:133064438"
ORIGIN      
        1 mwpplppprp gmseetrqsk laaakkklre yqqknspgvp agakkkrkik ngsspettts
       61 gdcpspediq dilevlvsdl nrsngvaipp ldkwknhdad nssgpidest sfssteslrq
      121 lsqqlnglvs esssyingeg laspaniknl esryqelsva ldssnltnkq lsskieelkq
      181 enqetldqle kekkefeqkl akeqgalreq lqvhiqtigi lvsektelqt alvhtqqaar
      241 qkagesedla nrlqssrqrv gelertlsav stqqkqadry nkeltrerda lklelyknnk
      301 nnedlkqqns eleeklrllv ieksamqlgv eelqkklems elllqqfssq papdssqqlq
      361 qaleeraqle thveqlkdsl kqlqaerdqy vtnlkeenai wqqkmqqvle qmsklkeeke
      421 rsvsqaqele tslaelrnqi aapqpqeppa gpseteqwlq aeterlqkel eslagqlqaq
      481 vkdneslshl nqeqeqrlle lereaecwge qaeerkqile smqsdrttis ralsqnrelk
      541 eqlaelqngf vrlsnenmei tsalqseqhv kkelakklgq lqeklgelke tvevkgqevq
      601 dlqqqrdeyl nhlqqyvaay qqhvaayqql asekealhkq vllqtqlldr lqheevqgkv
      661 amevarqelq etqerleaan qqnqqlqaql tlmavpgegd gldseeqdee aprpklsvpe
      721 elesrealve ffhsalasae deqarlrgql keqklrcqrl shlavaaqdr veketpapri
      781 ggdsvpaeah qalqvamdkl qgrftelmqe kvdlkervee lehrciqlsg etdtigeyia
      841 lyqsqravlk arhqekeeyi srlaqdkeem kvkllelqel vlrlvgerne wygkflaaqn
      901 pagepttapa tcqepgtadn egglqevsla dnvespqgal pgqatsenpt aqqimqllre
      961 iqnpqehpgl gsnpcipffy raddndevki mvi
//
LOCUS       XP_061010517             992 aa            linear   MAM 02-DEC-2023
DEFINITION  golgin subfamily A member 2 isoform X5 [Dama dama].
ACCESSION   XP_061010517
VERSION     XP_061010517.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154534.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..992
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..992
                     /product="golgin subfamily A member 2 isoform X5"
                     /calculated_mol_wt=111423
     Region          194..>537
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     Region          374..897
                     /region_name="GOLGA2L5"
                     /note="Putative golgin subfamily A member 2-like protein
                     5; pfam15070"
                     /db_xref="CDD:464485"
     Region          943..988
                     /region_name="GM130_C"
                     /note="GM130 C-terminal binding motif; pfam19046"
                     /db_xref="CDD:465957"
     CDS             1..992
                     /gene="GOLGA2"
                     /coded_by="XM_061154534.1:16..2994"
                     /db_xref="GeneID:133064438"
ORIGIN      
        1 mwpplppprp gmseetrqsk laaakkklre yqqknspgvp agakkkrkik ngsspettts
       61 gdcpspediq dilevlvsdl nrsngvaipp ldkwkapkdc aapvtpsadd tvspggvpsp
      121 saspprvtsm astqnhdadn ssgpidests fssteslrql sqqlnglvse sssyingegl
      181 aspaniknle ekkefeqkla keqgalreql qvhiqtigil vsektelqta lvhtqqaarq
      241 kagesedlan rlqssrqrvg elertlsavs tqqkqadryn keltrerdal klelyknnkn
      301 nedlkqqnse leeklrllvi eksamqlgve elqkklemse lllqqfssqp apdssqqlqq
      361 aleeraqlet hveqlkdslk qlqaerdqyv tnlkeenaiw qqkmqqvleq msklkeeker
      421 svsqaqelet slaelrnqia apqpqeppag pseteqwlqa eterlqkele slagqlqaqv
      481 kdneslshln qeqeqrllel ereaecwgeq aeerkqiles mqsdrttisr alsqnrelke
      541 qlaelqngfv rlsnenmeit salqseqhvk kelakklgql qeklgelket vevkgqevqd
      601 lqqqrdeyln hlqqyvaayq qhvaayqqla sekealhkqv llqtqlldrl qheevqgkva
      661 mevarqelqe tqerleaanq qnqqlqaqlt lmavpgegdg ldseeqdeea prpklsvpee
      721 lesrealvef fhsalasaed eqarlrgqlk eqklrcqrls hlavaaqdrv eketpaprig
      781 gdsvpaeahq alqvamdklq grftelmqek vdlkerveel ehrciqlsge tdtigeyial
      841 yqsqravlka rhqekeeyis rlaqdkeemk vkllelqelv lrlvgernew ygkflaaqnp
      901 agepttapat cqepgtadne gglqevslad nvespqgalp gqatsenpta qqimqllrei
      961 qnpqehpglg snpcipffyr addndevkim vi
//
LOCUS       XP_061010518             978 aa            linear   MAM 02-DEC-2023
DEFINITION  golgin subfamily A member 2 isoform X6 [Dama dama].
ACCESSION   XP_061010518
VERSION     XP_061010518.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154535.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..978
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..978
                     /product="golgin subfamily A member 2 isoform X6"
                     /calculated_mol_wt=109992
     Region          208..>438
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          360..883
                     /region_name="GOLGA2L5"
                     /note="Putative golgin subfamily A member 2-like protein
                     5; pfam15070"
                     /db_xref="CDD:464485"
     Region          929..974
                     /region_name="GM130_C"
                     /note="GM130 C-terminal binding motif; pfam19046"
                     /db_xref="CDD:465957"
     CDS             1..978
                     /gene="GOLGA2"
                     /coded_by="XM_061154535.1:16..2952"
                     /db_xref="GeneID:133064438"
ORIGIN      
        1 mwpplppprp gmseetrqsk laaakkklre yqqknspgvp agakkkrkik ngsspettts
       61 gdcpspedap kdcaapvtps addtvspggv pspsaspprv tsmastqnhd adnssgpide
      121 stsfsstesl rqlsqqlngl vsesssying eglaspanik nlekqenqet ldqlekekke
      181 feqklakeqg alreqlqvhi qtigilvsek telqtalvht qqaarqkage sedlanrlqs
      241 srqrvgeler tlsavstqqk qadrynkelt rerdalklel yknnknnedl kqqnseleek
      301 lrllvieksa mqlgveelqk klemselllq qfssqpapds sqqlqqalee raqlethveq
      361 lkdslkqlqa erdqyvtnlk eenaiwqqkm qqvleqmskl keekersvsq aqeletslae
      421 lrnqiaapqp qeppagpset eqwlqaeter lqkeleslag qlqaqvkdne slshlnqeqe
      481 qrllelerea ecwgeqaeer kqilesmqsd rttisralsq nrelkeqlae lqngfvrlsn
      541 enmeitsalq seqhvkkela kklgqlqekl gelketvevk gqevqdlqqq rdeylnhlqq
      601 yvaayqqhva ayqqlaseke alhkqvllqt qlldrlqhee vqgkvameva rqelqetqer
      661 leaanqqnqq lqaqltlmav pgegdgldse eqdeeaprpk lsvpeelesr ealveffhsa
      721 lasaedeqar lrgqlkeqkl rcqrlshlav aaqdrveket papriggdsv paeahqalqv
      781 amdklqgrft elmqekvdlk erveelehrc iqlsgetdti geyialyqsq ravlkarhqe
      841 keeyisrlaq dkeemkvkll elqelvlrlv gernewygkf laaqnpagep ttapatcqep
      901 gtadnegglq evsladnves pqgalpgqat senptaqqim qllreiqnpq ehpglgsnpc
      961 ipffyraddn devkimvi
//
LOCUS       XP_061010519             966 aa            linear   MAM 02-DEC-2023
DEFINITION  golgin subfamily A member 2 isoform X7 [Dama dama].
ACCESSION   XP_061010519
VERSION     XP_061010519.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154536.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..966
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..966
                     /product="golgin subfamily A member 2 isoform X7"
                     /calculated_mol_wt=109307
     Region          <118..446
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          348..871
                     /region_name="GOLGA2L5"
                     /note="Putative golgin subfamily A member 2-like protein
                     5; pfam15070"
                     /db_xref="CDD:464485"
     Region          917..962
                     /region_name="GM130_C"
                     /note="GM130 C-terminal binding motif; pfam19046"
                     /db_xref="CDD:465957"
     CDS             1..966
                     /gene="GOLGA2"
                     /coded_by="XM_061154536.1:16..2916"
                     /db_xref="GeneID:133064438"
ORIGIN      
        1 mwpplppprp gmseetrqsk laaakkklre yqqknspgvp agakkkrkik ngsspettts
       61 gdcpspednh dadnssgpid estsfsstes lrqlsqqlng lvsesssyin geglaspani
      121 knlesryqel svaldssnlt nkqlsskiee lkqenqetld qlekekkefe qklakeqgal
      181 reqlqvhiqt igilvsekte lqtalvhtqq aarqkagese dlanrlqssr qrvgelertl
      241 savstqqkqa drynkeltre rdalklelyk nnknnedlkq qnseleeklr llvieksamq
      301 lgveelqkkl emselllqqf ssqpapdssq qlqqaleera qlethveqlk dslkqlqaer
      361 dqyvtnlkee naiwqqkmqq vleqmsklke ekersvsqaq eletslaelr nqiaapqpqe
      421 ppagpseteq wlqaeterlq keleslagql qaqvkdnesl shlnqeqeqr llelereaec
      481 wgeqaeerkq ilesmqsdrt tisralsqnr elkeqlaelq ngfvrlsnen meitsalqse
      541 qhvkkelakk lgqlqeklge lketvevkgq evqdlqqqrd eylnhlqqyv aayqqhvaay
      601 qqlasekeal hkqvllqtql ldrlqheevq gkvamevarq elqetqerle aanqqnqqlq
      661 aqltlmavpg egdgldseeq deeaprpkls vpeelesrea lveffhsala saedeqarlr
      721 gqlkeqklrc qrlshlavaa qdrveketpa priggdsvpa eahqalqvam dklqgrftel
      781 mqekvdlker veelehrciq lsgetdtige yialyqsqra vlkarhqeke eyisrlaqdk
      841 eemkvkllel qelvlrlvge rnewygkfla aqnpageptt apatcqepgt adnegglqev
      901 sladnvespq galpgqatse nptaqqimql lreiqnpqeh pglgsnpcip ffyraddnde
      961 vkimvi
//
LOCUS       XP_061010521             965 aa            linear   MAM 02-DEC-2023
DEFINITION  golgin subfamily A member 2 isoform X8 [Dama dama].
ACCESSION   XP_061010521
VERSION     XP_061010521.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154538.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..965
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..965
                     /product="golgin subfamily A member 2 isoform X8"
                     /calculated_mol_wt=108407
     Region          167..>510
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     Region          347..870
                     /region_name="GOLGA2L5"
                     /note="Putative golgin subfamily A member 2-like protein
                     5; pfam15070"
                     /db_xref="CDD:464485"
     Region          916..961
                     /region_name="GM130_C"
                     /note="GM130 C-terminal binding motif; pfam19046"
                     /db_xref="CDD:465957"
     CDS             1..965
                     /gene="GOLGA2"
                     /coded_by="XM_061154538.1:16..2913"
                     /db_xref="GeneID:133064438"
ORIGIN      
        1 mwpplppprp gmseetrqsk laaakkklre yqqknspgvp agakkkrkik ngsspettts
       61 gdcpspedap kdcaapvtps addtvspggv pspsaspprv tsmastqnhd adnssgpide
      121 stsfsstesl rqlsqqlngl vsesssying eglaspanik nleekkefeq klakeqgalr
      181 eqlqvhiqti gilvsektel qtalvhtqqa arqkagesed lanrlqssrq rvgelertls
      241 avstqqkqad rynkeltrer dalklelykn nknnedlkqq nseleeklrl lvieksamql
      301 gveelqkkle mselllqqfs sqpapdssqq lqqaleeraq lethveqlkd slkqlqaerd
      361 qyvtnlkeen aiwqqkmqqv leqmsklkee kersvsqaqe letslaelrn qiaapqpqep
      421 pagpseteqw lqaeterlqk eleslagqlq aqvkdnesls hlnqeqeqrl lelereaecw
      481 geqaeerkqi lesmqsdrtt isralsqnre lkeqlaelqn gfvrlsnenm eitsalqseq
      541 hvkkelakkl gqlqeklgel ketvevkgqe vqdlqqqrde ylnhlqqyva ayqqhvaayq
      601 qlasekealh kqvllqtqll drlqheevqg kvamevarqe lqetqerlea anqqnqqlqa
      661 qltlmavpge gdgldseeqd eeaprpklsv peelesreal veffhsalas aedeqarlrg
      721 qlkeqklrcq rlshlavaaq drveketpap riggdsvpae ahqalqvamd klqgrftelm
      781 qekvdlkerv eelehrciql sgetdtigey ialyqsqrav lkarhqekee yisrlaqdke
      841 emkvkllelq elvlrlvger newygkflaa qnpageptta patcqepgta dnegglqevs
      901 ladnvespqg alpgqatsen ptaqqimqll reiqnpqehp glgsnpcipf fyraddndev
      961 kimvi
//
LOCUS       XP_061010522             864 aa            linear   MAM 02-DEC-2023
DEFINITION  dynamin-1 isoform X1 [Dama dama].
ACCESSION   XP_061010522
VERSION     XP_061010522.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154539.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..864
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..864
                     /product="dynamin-1 isoform X1"
                     /calculated_mol_wt=97136
     Region          6..245
                     /region_name="DYNc"
                     /note="Dynamin, GTPase; smart00053"
                     /db_xref="CDD:197491"
     Site            38..45
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206738"
     Site            order(39,41..46,59..60,65,136,206,208..209,235..239,242)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206738"
     Site            order(40..41,140,153,178,180,182..185,187..188,209,
                     211..214,238..240)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:206738"
     Site            65
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206738"
     Site            69..71
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206738"
     Site            136..139
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206738"
     Site            order(138..139,169..170)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206738"
     Site            205..208
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206738"
     Region          215..502
                     /region_name="Dynamin_M"
                     /note="Dynamin central region; pfam01031"
                     /db_xref="CDD:460033"
     Site            235..237
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206738"
     Region          514..625
                     /region_name="PH_dynamin"
                     /note="Dynamin pleckstrin homology (PH) domain; cd01256"
                     /db_xref="CDD:269958"
     Site            order(516,518..519,521,538,607..608,611,614..615,618)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:269958"
     Region          651..741
                     /region_name="GED"
                     /note="Dynamin GTPase effector domain; pfam02212"
                     /db_xref="CDD:460495"
     Region          <747..863
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..864
                     /gene="DNM1"
                     /coded_by="XM_061154539.1:104..2698"
                     /db_xref="GeneID:133064440"
ORIGIN      
        1 mgnrgmedli plvnrlqdaf saigqnadld lpqiavvggq sagkssvlen fvgrdflprg
       61 sgivtrrplv lqlvnattey aeflhckgkk ftdfeevrle ieaetdrvtg tnkgispvpi
      121 nlrvysphvl nltlvdlpgm tkvpvgdqpp diefqirdml mqfvtkencl ilavspansd
      181 lansdalkva kevdpqgqrt igvitkldlm degtdardvl enkllplrrg yigvvnrsqk
      241 didgkkdita alaaerkffl shpsyrhlad rmgtpylqkv lnqqltnhir dtlpglrnkl
      301 qsqllsieke veeyknfrpd dparktkall qmvqqfavdf ekriegsgdq idtyelsgga
      361 rinrifherf pfelvkmefd ekelrreisy aiknihgirt glftpdmafe tivkkqvkki
      421 repclkcvdm viselistvr qctkklqqyp rlreemeriv tthireregr tkeqvmllid
      481 ielaymntnh edfigfanaq qrsnqmnkkk asgnqvirkg wltinnigim kggskeywfv
      541 ltaenlswyk ddeekekkym lsvdnlklrd vekgfmsskh ifalfnteqr nvykdyrqle
      601 lacetqeevd swkasflrag vypervgdke kaseteengs dsfmhsmdpq lerqvetirn
      661 lvdsymaivn ktvrdlmpkt imhlminntk efifsellan lyscgdqntl meesaeqaqr
      721 rdemlrmyha lkealsiigd intttvstpm pppvddswlq vqsvptgrrs ptssptpqrr
      781 apavpparpg srgpapgppp agsalggapp vpsrpgaspd pfgpppqvps rpnrappgvp
      841 srkgpasptr pavprpaeap lldl
//
LOCUS       XP_061010523             860 aa            linear   MAM 02-DEC-2023
DEFINITION  dynamin-1 isoform X2 [Dama dama].
ACCESSION   XP_061010523
VERSION     XP_061010523.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154540.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..860
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..860
                     /product="dynamin-1 isoform X2"
                     /calculated_mol_wt=96635
     Region          6..245
                     /region_name="DYNc"
                     /note="Dynamin, GTPase; smart00053"
                     /db_xref="CDD:197491"
     Site            38..45
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206738"
     Site            order(39,41..46,59..60,65,136,206,208..209,235..239,242)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206738"
     Site            order(40..41,140,153,178,180,182..185,187..188,209,
                     211..214,238..240)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:206738"
     Site            65
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206738"
     Site            69..71
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206738"
     Site            136..139
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206738"
     Site            order(138..139,169..170)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206738"
     Site            205..208
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206738"
     Region          215..502
                     /region_name="Dynamin_M"
                     /note="Dynamin central region; pfam01031"
                     /db_xref="CDD:460033"
     Site            235..237
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206738"
     Region          514..625
                     /region_name="PH_dynamin"
                     /note="Dynamin pleckstrin homology (PH) domain; cd01256"
                     /db_xref="CDD:269958"
     Site            order(516,518..519,521,538,607..608,611,614..615,618)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:269958"
     Region          647..737
                     /region_name="GED"
                     /note="Dynamin GTPase effector domain; pfam02212"
                     /db_xref="CDD:460495"
     Region          <743..859
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..860
                     /gene="DNM1"
                     /coded_by="XM_061154540.1:104..2686"
                     /db_xref="GeneID:133064440"
ORIGIN      
        1 mgnrgmedli plvnrlqdaf saigqnadld lpqiavvggq sagkssvlen fvgrdflprg
       61 sgivtrrplv lqlvnattey aeflhckgkk ftdfeevrle ieaetdrvtg tnkgispvpi
      121 nlrvysphvl nltlvdlpgm tkvpvgdqpp diefqirdml mqfvtkencl ilavspansd
      181 lansdalkva kevdpqgqrt igvitkldlm degtdardvl enkllplrrg yigvvnrsqk
      241 didgkkdita alaaerkffl shpsyrhlad rmgtpylqkv lnqqltnhir dtlpglrnkl
      301 qsqllsieke veeyknfrpd dparktkall qmvqqfavdf ekriegsgdq idtyelsgga
      361 rinrifherf pfelvkmefd ekelrreisy aiknihgirt glftpdmafe tivkkqvkki
      421 repclkcvdm viselistvr qctkklqqyp rlreemeriv tthireregr tkeqvmllid
      481 ielaymntnh edfigfanaq qrsnqmnkkk asgnqvirkg wltinnigim kggskeywfv
      541 ltaenlswyk ddeekekkym lsvdnlklrd vekgfmsskh ifalfnteqr nvykdyrqle
      601 lacetqeevd swkasflrag vypervgase teengsdsfm hsmdpqlerq vetirnlvds
      661 ymaivnktvr dlmpktimhl minntkefif sellanlysc gdqntlmees aeqaqrrdem
      721 lrmyhalkea lsiigdintt tvstpmpppv ddswlqvqsv ptgrrsptss ptpqrrapav
      781 pparpgsrgp apgpppagsa lggappvpsr pgaspdpfgp ppqvpsrpnr appgvpsrkg
      841 pasptrpavp rpaeaplldl
//
LOCUS       XP_061010524             847 aa            linear   MAM 02-DEC-2023
DEFINITION  dynamin-1 isoform X3 [Dama dama].
ACCESSION   XP_061010524
VERSION     XP_061010524.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154541.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..847
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..847
                     /product="dynamin-1 isoform X3"
                     /calculated_mol_wt=95440
     Region          6..245
                     /region_name="DYNc"
                     /note="Dynamin, GTPase; smart00053"
                     /db_xref="CDD:197491"
     Site            38..45
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206738"
     Site            order(39,41..46,59..60,65,136,206,208..209,235..239,242)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206738"
     Site            order(40..41,140,153,178,180,182..185,187..188,209,
                     211..214,238..240)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:206738"
     Site            65
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206738"
     Site            69..71
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206738"
     Site            136..139
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206738"
     Site            order(138..139,169..170)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206738"
     Site            205..208
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206738"
     Region          215..502
                     /region_name="Dynamin_M"
                     /note="Dynamin central region; pfam01031"
                     /db_xref="CDD:460033"
     Site            235..237
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206738"
     Region          514..625
                     /region_name="PH_dynamin"
                     /note="Dynamin pleckstrin homology (PH) domain; cd01256"
                     /db_xref="CDD:269958"
     Site            order(516,518..519,521,538,607..608,611,614..615,618)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:269958"
     Region          651..741
                     /region_name="GED"
                     /note="Dynamin GTPase effector domain; pfam02212"
                     /db_xref="CDD:460495"
     Region          <748..840
                     /region_name="PHA03378"
                     /note="EBNA-3B; Provisional"
                     /db_xref="CDD:223065"
     CDS             1..847
                     /gene="DNM1"
                     /coded_by="XM_061154541.1:104..2647"
                     /db_xref="GeneID:133064440"
ORIGIN      
        1 mgnrgmedli plvnrlqdaf saigqnadld lpqiavvggq sagkssvlen fvgrdflprg
       61 sgivtrrplv lqlvnattey aeflhckgkk ftdfeevrle ieaetdrvtg tnkgispvpi
      121 nlrvysphvl nltlvdlpgm tkvpvgdqpp diefqirdml mqfvtkencl ilavspansd
      181 lansdalkva kevdpqgqrt igvitkldlm degtdardvl enkllplrrg yigvvnrsqk
      241 didgkkdita alaaerkffl shpsyrhlad rmgtpylqkv lnqqltnhir dtlpglrnkl
      301 qsqllsieke veeyknfrpd dparktkall qmvqqfavdf ekriegsgdq idtyelsgga
      361 rinrifherf pfelvkmefd ekelrreisy aiknihgirt glftpdmafe tivkkqvkki
      421 repclkcvdm viselistvr qctkklqqyp rlreemeriv tthireregr tkeqvmllid
      481 ielaymntnh edfigfanaq qrsnqmnkkk asgnqvirkg wltinnigim kggskeywfv
      541 ltaenlswyk ddeekekkym lsvdnlklrd vekgfmsskh ifalfnteqr nvykdyrqle
      601 lacetqeevd swkasflrag vypervgdke kaseteengs dsfmhsmdpq lerqvetirn
      661 lvdsymaivn ktvrdlmpkt imhlminntk efifsellan lyscgdqntl meesaeqaqr
      721 rdemlrmyha lkealsiigd intttvstpm pppvddswlq vqsvptgrrs ptssptpqrr
      781 apavpparpg srgpapgppp agsalggapp vpsrpgaspd pfgpppqvps rpnrappgvp
      841 ritisdp
//
LOCUS       XP_061010525             863 aa            linear   MAM 02-DEC-2023
DEFINITION  cip1-interacting zinc finger protein isoform X1 [Dama dama].
ACCESSION   XP_061010525
VERSION     XP_061010525.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154542.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..863
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..863
                     /product="cip1-interacting zinc finger protein isoform X1"
                     /calculated_mol_wt=95569
     Region          <112..464
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          555..584
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     Region          558..580
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          618..>684
                     /region_name="GIY-YIG_SF"
                     /note="GIY-YIG nuclease domain superfamily; cl15257"
                     /db_xref="CDD:472790"
     Region          619..639
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Site            order(626..628,629,633,638,655,658..662,664..665)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275371"
     Region          649..673
                     /region_name="zf-C2H2_jaz"
                     /note="Zinc-finger double-stranded RNA-binding; pfam12171"
                     /db_xref="CDD:432381"
     Region          650..672
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          761..794
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     CDS             1..863
                     /gene="CIZ1"
                     /coded_by="XM_061154542.1:146..2737"
                     /db_xref="GeneID:133064441"
ORIGIN      
        1 mfnqqqplqq lqqqqlqqqq llqlqqllqq sppqaplpmt vsrglppqqp qqqlltlqgt
       61 sptsllngsv lqralllqql qgldqfampp amydsagltm ptatlgnlrg ynlatpnltp
      121 psltppqlat pnlqqffpqa trqsllgppp vgvpinpsql nlsgrtpqkq arttsvtpnr
      181 kdsssqtmpv edksdppegs eeaaeprtdt pevshlpsip dqeppqcpdd iakekrtpal
      241 epesceasep pakktkssee paekgppgql qaevqlqtrm mapkqtqtpe llpeplearv
      301 qprfqprvlq iaaqvqpqtk pqtlpvnvqv qpklqkqaqt qtspehlapq qvqrqpqkev
      361 eprrqaqpqa qpqpprhvqp llqkqaqtqt ypevqteaql rlqppeqppk qppvrlpvqp
      421 peptqgrpqt qpqasvpale kapvlvssta petlpdtvea gagpeeappe pvgaqvsvee
      481 sqeelnggld vaecerrare mlgvwgaggs lkvtilqssd srafstvplt papragdsts
      541 atpavastps kqalqffcyi ckascssqqd fqehmsgaqh qqrlgeiqhm sqayllsllp
      601 vprdvlered eeppprrwch tcqlyyvgdl iqhrrtqdhk lakqslrpfc ticnryfktp
      661 rkfvehvksq ghkdkakelk tlekdiagqd edhfitvdav gcfegdeeee eddeeeeeie
      721 aeeefckqmr srdisveewk gsetyspnta ygvdflvpvm gyvcrichkf yhsnsgaqls
      781 hckslahfen lqkykkakkp spttrpvsrr cainarnalt alftsggrap sqpstqdtak
      841 tpskvtstpp rpplprrsrr lrt
//
LOCUS       XP_061010526             863 aa            linear   MAM 02-DEC-2023
DEFINITION  cip1-interacting zinc finger protein isoform X1 [Dama dama].
ACCESSION   XP_061010526
VERSION     XP_061010526.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154543.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..863
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..863
                     /product="cip1-interacting zinc finger protein isoform X1"
                     /calculated_mol_wt=95569
     Region          <112..464
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          555..584
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     Region          558..580
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          618..>684
                     /region_name="GIY-YIG_SF"
                     /note="GIY-YIG nuclease domain superfamily; cl15257"
                     /db_xref="CDD:472790"
     Region          619..639
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Site            order(626..628,629,633,638,655,658..662,664..665)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275371"
     Region          649..673
                     /region_name="zf-C2H2_jaz"
                     /note="Zinc-finger double-stranded RNA-binding; pfam12171"
                     /db_xref="CDD:432381"
     Region          650..672
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          761..794
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     CDS             1..863
                     /gene="CIZ1"
                     /coded_by="XM_061154543.1:61..2652"
                     /db_xref="GeneID:133064441"
ORIGIN      
        1 mfnqqqplqq lqqqqlqqqq llqlqqllqq sppqaplpmt vsrglppqqp qqqlltlqgt
       61 sptsllngsv lqralllqql qgldqfampp amydsagltm ptatlgnlrg ynlatpnltp
      121 psltppqlat pnlqqffpqa trqsllgppp vgvpinpsql nlsgrtpqkq arttsvtpnr
      181 kdsssqtmpv edksdppegs eeaaeprtdt pevshlpsip dqeppqcpdd iakekrtpal
      241 epesceasep pakktkssee paekgppgql qaevqlqtrm mapkqtqtpe llpeplearv
      301 qprfqprvlq iaaqvqpqtk pqtlpvnvqv qpklqkqaqt qtspehlapq qvqrqpqkev
      361 eprrqaqpqa qpqpprhvqp llqkqaqtqt ypevqteaql rlqppeqppk qppvrlpvqp
      421 peptqgrpqt qpqasvpale kapvlvssta petlpdtvea gagpeeappe pvgaqvsvee
      481 sqeelnggld vaecerrare mlgvwgaggs lkvtilqssd srafstvplt papragdsts
      541 atpavastps kqalqffcyi ckascssqqd fqehmsgaqh qqrlgeiqhm sqayllsllp
      601 vprdvlered eeppprrwch tcqlyyvgdl iqhrrtqdhk lakqslrpfc ticnryfktp
      661 rkfvehvksq ghkdkakelk tlekdiagqd edhfitvdav gcfegdeeee eddeeeeeie
      721 aeeefckqmr srdisveewk gsetyspnta ygvdflvpvm gyvcrichkf yhsnsgaqls
      781 hckslahfen lqkykkakkp spttrpvsrr cainarnalt alftsggrap sqpstqdtak
      841 tpskvtstpp rpplprrsrr lrt
//
LOCUS       XP_061010527             858 aa            linear   MAM 02-DEC-2023
DEFINITION  cip1-interacting zinc finger protein isoform X2 [Dama dama].
ACCESSION   XP_061010527
VERSION     XP_061010527.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154544.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..858
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..858
                     /product="cip1-interacting zinc finger protein isoform X2"
                     /calculated_mol_wt=95065
     Region          <115..459
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          550..579
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     Region          553..575
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          613..>679
                     /region_name="GIY-YIG_SF"
                     /note="GIY-YIG nuclease domain superfamily; cl15257"
                     /db_xref="CDD:472790"
     Region          614..634
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Site            order(621..623,624,628,633,650,653..657,659..660)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275371"
     Region          644..668
                     /region_name="zf-C2H2_jaz"
                     /note="Zinc-finger double-stranded RNA-binding; pfam12171"
                     /db_xref="CDD:432381"
     Region          645..667
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          756..789
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     CDS             1..858
                     /gene="CIZ1"
                     /coded_by="XM_061154544.1:146..2722"
                     /db_xref="GeneID:133064441"
ORIGIN      
        1 mfnqqqplqq lqqqqlqqqq llqlqqllqq sppqaplpmt vsrglppqqp qqqlltlqgt
       61 sptsllngsv lqralllqql qgldqfampp amydsagltm ptatlgnlrg ynlatpnltp
      121 psltppqlat pnlqqffpqa trqsllgppp vgvpinpsql nlsgrtpqkq arttsvtpnr
      181 ktmpvedksd ppegseeaae prtdtpevsh lpsipdqepp qcpddiakek rtpalepesc
      241 easeppakkt ksseepaekg ppgqlqaevq lqtrmmapkq tqtpellpep learvqprfq
      301 prvlqiaaqv qpqtkpqtlp vnvqvqpklq kqaqtqtspe hlapqqvqrq pqkeveprrq
      361 aqpqaqpqpp rhvqpllqkq aqtqtypevq teaqlrlqpp eqppkqppvr lpvqppeptq
      421 grpqtqpqas vpalekapvl vsstapetlp dtveagagpe eappepvgaq vsveesqeel
      481 nggldvaece rraremlgvw gaggslkvti lqssdsrafs tvpltpapra gdstsatpav
      541 astpskqalq ffcyickasc ssqqdfqehm sgaqhqqrlg eiqhmsqayl lsllpvprdv
      601 leredeeppp rrwchtcqly yvgdliqhrr tqdhklakqs lrpfcticnr yfktprkfve
      661 hvksqghkdk akelktlekd iagqdedhfi tvdavgcfeg deeeeeddee eeeieaeeef
      721 ckqmrsrdis veewkgsety spntaygvdf lvpvmgyvcr ichkfyhsns gaqlshcksl
      781 ahfenlqkyk kakkpspttr pvsrrcaina rnaltalfts ggrapsqpst qdtaktpskv
      841 tstpprpplp rrsrrlrt
//
LOCUS       XP_061010528             855 aa            linear   MAM 02-DEC-2023
DEFINITION  cip1-interacting zinc finger protein isoform X3 [Dama dama].
ACCESSION   XP_061010528
VERSION     XP_061010528.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154545.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..855
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..855
                     /product="cip1-interacting zinc finger protein isoform X3"
                     /calculated_mol_wt=94738
     Region          <115..456
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          547..576
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     Region          550..572
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          610..>676
                     /region_name="GIY-YIG_SF"
                     /note="GIY-YIG nuclease domain superfamily; cl15257"
                     /db_xref="CDD:472790"
     Region          611..631
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Site            order(618..620,621,625,630,647,650..654,656..657)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275371"
     Region          641..665
                     /region_name="zf-C2H2_jaz"
                     /note="Zinc-finger double-stranded RNA-binding; pfam12171"
                     /db_xref="CDD:432381"
     Region          642..664
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          753..786
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     CDS             1..855
                     /gene="CIZ1"
                     /coded_by="XM_061154545.1:146..2713"
                     /db_xref="GeneID:133064441"
ORIGIN      
        1 mfnqqqplqq lqqqqlqqqq llqlqqllqq sppqaplpmt vsrglppqqp qqqlltlqgt
       61 sptsllngsv lqralllqql qgldqfampp amydsagltm ptatlgnlrg ynlatpnltp
      121 psltppqlat pnlqqffpqa trqsllgppp vgvpinpsql nlsgrtpqkq arttsvtpnr
      181 kdsssqtmpv edksdppegs eeaaeprtdt pedqeppqcp ddiakekrtp alepesceas
      241 eppakktkss eepaekgppg qlqaevqlqt rmmapkqtqt pellpeplea rvqprfqprv
      301 lqiaaqvqpq tkpqtlpvnv qvqpklqkqa qtqtspehla pqqvqrqpqk eveprrqaqp
      361 qaqpqpprhv qpllqkqaqt qtypevqtea qlrlqppeqp pkqppvrlpv qppeptqgrp
      421 qtqpqasvpa lekapvlvss tapetlpdtv eagagpeeap pepvgaqvsv eesqeelngg
      481 ldvaecerra remlgvwgag gslkvtilqs sdsrafstvp ltpapragds tsatpavast
      541 pskqalqffc yickascssq qdfqehmsga qhqqrlgeiq hmsqayllsl lpvprdvler
      601 edeeppprrw chtcqlyyvg dliqhrrtqd hklakqslrp fcticnryfk tprkfvehvk
      661 sqghkdkake lktlekdiag qdedhfitvd avgcfegdee eeeddeeeee ieaeeefckq
      721 mrsrdisvee wkgsetyspn taygvdflvp vmgyvcrich kfyhsnsgaq lshckslahf
      781 enlqkykkak kpspttrpvs rrcainarna ltalftsggr apsqpstqdt aktpskvtst
      841 pprpplprrs rrlrt
//
LOCUS       XP_061010529             852 aa            linear   MAM 02-DEC-2023
DEFINITION  cip1-interacting zinc finger protein isoform X4 [Dama dama].
ACCESSION   XP_061010529
VERSION     XP_061010529.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154546.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..852
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..852
                     /product="cip1-interacting zinc finger protein isoform X4"
                     /calculated_mol_wt=94224
     Region          <112..464
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          555..584
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     Region          558..580
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          618..>684
                     /region_name="GIY-YIG_SF"
                     /note="GIY-YIG nuclease domain superfamily; cl15257"
                     /db_xref="CDD:472790"
     Region          619..639
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Site            order(626..628,629,633,638,655,658..662,664..665)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275371"
     Region          649..673
                     /region_name="zf-C2H2_jaz"
                     /note="Zinc-finger double-stranded RNA-binding; pfam12171"
                     /db_xref="CDD:432381"
     Region          650..672
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          761..794
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     CDS             1..852
                     /gene="CIZ1"
                     /coded_by="XM_061154546.1:146..2704"
                     /db_xref="GeneID:133064441"
ORIGIN      
        1 mfnqqqplqq lqqqqlqqqq llqlqqllqq sppqaplpmt vsrglppqqp qqqlltlqgt
       61 sptsllngsv lqralllqql qgldqfampp amydsagltm ptatlgnlrg ynlatpnltp
      121 psltppqlat pnlqqffpqa trqsllgppp vgvpinpsql nlsgrtpqkq arttsvtpnr
      181 kdsssqtmpv edksdppegs eeaaeprtdt pevshlpsip dqeppqcpdd iakekrtpal
      241 epesceasep pakktkssee paekgppgql qaevqlqtrm mapkqtqtpe llpeplearv
      301 qprfqprvlq iaaqvqpqtk pqtlpvnvqv qpklqkqaqt qtspehlapq qvqrqpqkev
      361 eprrqaqpqa qpqpprhvqp llqkqaqtqt ypevqteaql rlqppeqppk qppvrlpvqp
      421 peptqgrpqt qpqasvpale kapvlvssta petlpdtvea gagpeeappe pvgaqvsvee
      481 sqeelnggld vaecerrare mlgvwgaggs lkvtilqssd srafstvplt papragdsts
      541 atpavastps kqalqffcyi ckascssqqd fqehmsgaqh qqrlgeiqhm sqayllsllp
      601 vprdvlered eeppprrwch tcqlyyvgdl iqhrrtqdhk lakqslrpfc ticnryfktp
      661 rkfvehvksq ghkdkakelk tlekdiagqd edhfitvdav gcfegdeeee eddeeeeeie
      721 aeeefckqmr srdisveewk gsetyspnta ygvdflvpvm gyvcrichkf yhsnsgaqls
      781 hckslahfen lqkykkakkp spttrpvsrr cainarnalt alftsggrap sqpstqdtak
      841 tpskkgpraq rs
//
LOCUS       XP_061010531             850 aa            linear   MAM 02-DEC-2023
DEFINITION  cip1-interacting zinc finger protein isoform X5 [Dama dama].
ACCESSION   XP_061010531
VERSION     XP_061010531.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154548.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..850
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..850
                     /product="cip1-interacting zinc finger protein isoform X5"
                     /calculated_mol_wt=94234
     Region          <112..451
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          542..571
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     Region          545..567
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          605..>671
                     /region_name="GIY-YIG_SF"
                     /note="GIY-YIG nuclease domain superfamily; cl15257"
                     /db_xref="CDD:472790"
     Region          606..626
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Site            order(613..615,616,620,625,642,645..649,651..652)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275371"
     Region          636..660
                     /region_name="zf-C2H2_jaz"
                     /note="Zinc-finger double-stranded RNA-binding; pfam12171"
                     /db_xref="CDD:432381"
     Region          637..659
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          748..781
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     CDS             1..850
                     /gene="CIZ1"
                     /coded_by="XM_061154548.1:146..2698"
                     /db_xref="GeneID:133064441"
ORIGIN      
        1 mfnqqqplqq lqqqqlqqqq llqlqqllqq sppqaplpmt vsrglppqqp qqqlltlqgt
       61 sptsllngsv lqralllqql qgldqfampp amydsagltm ptatlgnlrg ynlatpnltp
      121 psltppqlat pnlqqffpqa trqsllgppp vgvpinpsql nlsgrtpqkq arttsvtpnr
      181 ktmpvedksd ppegseeaae prtdtpedqe ppqcpddiak ekrtpalepe sceaseppak
      241 ktksseepae kgppgqlqae vqlqtrmmap kqtqtpellp eplearvqpr fqprvlqiaa
      301 qvqpqtkpqt lpvnvqvqpk lqkqaqtqts pehlapqqvq rqpqkevepr rqaqpqaqpq
      361 pprhvqpllq kqaqtqtype vqteaqlrlq ppeqppkqpp vrlpvqppep tqgrpqtqpq
      421 asvpalekap vlvsstapet lpdtveagag peeappepvg aqvsveesqe elnggldvae
      481 cerraremlg vwgaggslkv tilqssdsra fstvpltpap ragdstsatp avastpskqa
      541 lqffcyicka scssqqdfqe hmsgaqhqqr lgeiqhmsqa yllsllpvpr dvleredeep
      601 pprrwchtcq lyyvgdliqh rrtqdhklak qslrpfctic nryfktprkf vehvksqghk
      661 dkakelktle kdiagqdedh fitvdavgcf egdeeeeedd eeeeeieaee efckqmrsrd
      721 isveewkgse tyspntaygv dflvpvmgyv crichkfyhs nsgaqlshck slahfenlqk
      781 ykkakkpspt trpvsrrcai narnaltalf tsggrapsqp stqdtaktps kvtstpprpp
      841 lprrsrrlrt
//
LOCUS       XP_061010532             839 aa            linear   MAM 02-DEC-2023
DEFINITION  cip1-interacting zinc finger protein isoform X6 [Dama dama].
ACCESSION   XP_061010532
VERSION     XP_061010532.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154549.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..839
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..839
                     /product="cip1-interacting zinc finger protein isoform X6"
                     /calculated_mol_wt=93087
     Region          <88..440
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          531..560
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     Region          534..556
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          594..>660
                     /region_name="GIY-YIG_SF"
                     /note="GIY-YIG nuclease domain superfamily; cl15257"
                     /db_xref="CDD:472790"
     Region          595..615
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Site            order(602..604,605,609,614,631,634..638,640..641)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275371"
     Region          625..649
                     /region_name="zf-C2H2_jaz"
                     /note="Zinc-finger double-stranded RNA-binding; pfam12171"
                     /db_xref="CDD:432381"
     Region          626..648
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          737..770
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     CDS             1..839
                     /gene="CIZ1"
                     /coded_by="XM_061154549.1:146..2665"
                     /db_xref="GeneID:133064441"
ORIGIN      
        1 mfnqqqplqq lqqqqlqqqq llqlqqllqq sppqaplpmt vsrglppqqp qqqlltlqgt
       61 sptsllngsv lqralllqql qgnlrgynla tpnltppslt ppqlatpnlq qffpqatrqs
      121 llgpppvgvp inpsqlnlsg rtpqkqartt svtpnrkdss sqtmpvedks dppegseeaa
      181 eprtdtpevs hlpsipdqep pqcpddiake krtpalepes ceaseppakk tksseepaek
      241 gppgqlqaev qlqtrmmapk qtqtpellpe plearvqprf qprvlqiaaq vqpqtkpqtl
      301 pvnvqvqpkl qkqaqtqtsp ehlapqqvqr qpqkeveprr qaqpqaqpqp prhvqpllqk
      361 qaqtqtypev qteaqlrlqp peqppkqppv rlpvqppept qgrpqtqpqa svpalekapv
      421 lvsstapetl pdtveagagp eeappepvga qvsveesqee lnggldvaec erraremlgv
      481 wgaggslkvt ilqssdsraf stvpltpapr agdstsatpa vastpskqal qffcyickas
      541 cssqqdfqeh msgaqhqqrl geiqhmsqay llsllpvprd vleredeepp prrwchtcql
      601 yyvgdliqhr rtqdhklakq slrpfcticn ryfktprkfv ehvksqghkd kakelktlek
      661 diagqdedhf itvdavgcfe gdeeeeedde eeeeieaeee fckqmrsrdi sveewkgset
      721 yspntaygvd flvpvmgyvc richkfyhsn sgaqlshcks lahfenlqky kkakkpsptt
      781 rpvsrrcain arnaltalft sggrapsqps tqdtaktpsk vtstpprppl prrsrrlrt
//
LOCUS       XP_061010533             835 aa            linear   MAM 02-DEC-2023
DEFINITION  cip1-interacting zinc finger protein isoform X7 [Dama dama].
ACCESSION   XP_061010533
VERSION     XP_061010533.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154550.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..835
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..835
                     /product="cip1-interacting zinc finger protein isoform X7"
                     /calculated_mol_wt=92481
     Region          <112..464
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          527..556
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     Region          530..552
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          590..>656
                     /region_name="GIY-YIG_SF"
                     /note="GIY-YIG nuclease domain superfamily; cl15257"
                     /db_xref="CDD:472790"
     Region          591..611
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Site            order(598..600,601,605,610,627,630..634,636..637)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275371"
     Region          621..645
                     /region_name="zf-C2H2_jaz"
                     /note="Zinc-finger double-stranded RNA-binding; pfam12171"
                     /db_xref="CDD:432381"
     Region          622..644
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          733..766
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     CDS             1..835
                     /gene="CIZ1"
                     /coded_by="XM_061154550.1:146..2653"
                     /db_xref="GeneID:133064441"
ORIGIN      
        1 mfnqqqplqq lqqqqlqqqq llqlqqllqq sppqaplpmt vsrglppqqp qqqlltlqgt
       61 sptsllngsv lqralllqql qgldqfampp amydsagltm ptatlgnlrg ynlatpnltp
      121 psltppqlat pnlqqffpqa trqsllgppp vgvpinpsql nlsgrtpqkq arttsvtpnr
      181 kdsssqtmpv edksdppegs eeaaeprtdt pevshlpsip dqeppqcpdd iakekrtpal
      241 epesceasep pakktkssee paekgppgql qaevqlqtrm mapkqtqtpe llpeplearv
      301 qprfqprvlq iaaqvqpqtk pqtlpvnvqv qpklqkqaqt qtspehlapq qvqrqpqkev
      361 eprrqaqpqa qpqpprhvqp llqkqaqtqt ypevqteaql rlqppeqppk qppvrlpvqp
      421 peptqgrpqt qpqasvpale kapvlvssta petlpdtvea gagpeeappe pvgaqvwgag
      481 gslkvtilqs sdsrafstvp ltpapragds tsatpavast pskqalqffc yickascssq
      541 qdfqehmsga qhqqrlgeiq hmsqayllsl lpvprdvler edeeppprrw chtcqlyyvg
      601 dliqhrrtqd hklakqslrp fcticnryfk tprkfvehvk sqghkdkake lktlekdiag
      661 qdedhfitvd avgcfegdee eeeddeeeee ieaeeefckq mrsrdisvee wkgsetyspn
      721 taygvdflvp vmgyvcrich kfyhsnsgaq lshckslahf enlqkykkak kpspttrpvs
      781 rrcainarna ltalftsggr apsqpstqdt aktpskvtst pprpplprrs rrlrt
//
LOCUS       XP_061010534             831 aa            linear   MAM 02-DEC-2023
DEFINITION  cip1-interacting zinc finger protein isoform X8 [Dama dama].
ACCESSION   XP_061010534
VERSION     XP_061010534.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154551.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..831
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..831
                     /product="cip1-interacting zinc finger protein isoform X8"
                     /calculated_mol_wt=92256
     Region          <91..432
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          523..552
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     Region          526..548
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          586..>652
                     /region_name="GIY-YIG_SF"
                     /note="GIY-YIG nuclease domain superfamily; cl15257"
                     /db_xref="CDD:472790"
     Region          587..607
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Site            order(594..596,597,601,606,623,626..630,632..633)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275371"
     Region          617..641
                     /region_name="zf-C2H2_jaz"
                     /note="Zinc-finger double-stranded RNA-binding; pfam12171"
                     /db_xref="CDD:432381"
     Region          618..640
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          729..762
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     CDS             1..831
                     /gene="CIZ1"
                     /coded_by="XM_061154551.1:146..2641"
                     /db_xref="GeneID:133064441"
ORIGIN      
        1 mfnqqqplqq lqqqqlqqqq llqlqqllqq sppqaplpmt vsrglppqqp qqqlltlqgt
       61 sptsllngsv lqralllqql qgnlrgynla tpnltppslt ppqlatpnlq qffpqatrqs
      121 llgpppvgvp inpsqlnlsg rtpqkqartt svtpnrkdss sqtmpvedks dppegseeaa
      181 eprtdtpedq eppqcpddia kekrtpalep esceaseppa kktksseepa ekgppgqlqa
      241 evqlqtrmma pkqtqtpell peplearvqp rfqprvlqia aqvqpqtkpq tlpvnvqvqp
      301 klqkqaqtqt spehlapqqv qrqpqkevep rrqaqpqaqp qpprhvqpll qkqaqtqtyp
      361 evqteaqlrl qppeqppkqp pvrlpvqppe ptqgrpqtqp qasvpaleka pvlvsstape
      421 tlpdtveaga gpeeappepv gaqvsveesq eelnggldva ecerrareml gvwgaggslk
      481 vtilqssdsr afstvpltpa pragdstsat pavastpskq alqffcyick ascssqqdfq
      541 ehmsgaqhqq rlgeiqhmsq ayllsllpvp rdvleredee ppprrwchtc qlyyvgdliq
      601 hrrtqdhkla kqslrpfcti cnryfktprk fvehvksqgh kdkakelktl ekdiagqded
      661 hfitvdavgc fegdeeeeed deeeeeieae eefckqmrsr disveewkgs etyspntayg
      721 vdflvpvmgy vcrichkfyh snsgaqlshc kslahfenlq kykkakkpsp ttrpvsrrca
      781 inarnaltal ftsggrapsq pstqdtaktp skvtstpprp plprrsrrlr t
//
LOCUS       XP_061010535              83 aa            linear   MAM 02-DEC-2023
DEFINITION  bublin coiled-coil protein [Dama dama].
ACCESSION   XP_061010535
VERSION     XP_061010535.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154552.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..83
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..83
                     /product="bublin coiled-coil protein"
                     /calculated_mol_wt=8964
     Region          1..83
                     /region_name="UPF0184"
                     /note="Uncharacterized protein family (UPF0184);
                     pfam03670"
                     /db_xref="CDD:112485"
     CDS             1..83
                     /gene="BBLN"
                     /coded_by="XM_061154552.1:135..386"
                     /db_xref="GeneID:133064442"
ORIGIN      
        1 msgpngdlgt pveagaegee egfgeaeyaa insmldqins cldhleeknd hlharlqell
       61 esnrqtrlef qqqlgetpsd anp
//
LOCUS       XP_061010536             372 aa            linear   MAM 02-DEC-2023
DEFINITION  prostaglandin E synthase 2 [Dama dama].
ACCESSION   XP_061010536
VERSION     XP_061010536.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154553.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..372
                     /product="prostaglandin E synthase 2"
                     /calculated_mol_wt=41609
     Region          98..174
                     /region_name="GST_N_mPGES2"
                     /note="GST_N family; microsomal Prostaglandin E synthase
                     Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored
                     dimeric protein containing a CXXC motif which catalyzes
                     the isomerization of PGH2 to PGE2. Unlike cytosolic PGE
                     synthase (cPGES) and microsomal...; cd03040"
                     /db_xref="CDD:239338"
     Site            order(104,106..110)
                     /site_type="active"
                     /note="GRX-like active site [active]"
                     /db_xref="CDD:239338"
     Site            order(105..107,111..112,114..115,119,130..132,136,163,167)
                     /site_type="other"
                     /note="C-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:239338"
     Site            order(144,160..161,163..164,167)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:239338"
     Region          221..369
                     /region_name="GST_C_mPGES2"
                     /note="C-terminal, alpha helical domain of microsomal
                     Prostaglandin E synthase Type 2; cd03197"
                     /db_xref="CDD:198306"
     Site            order(222,226,233,238,293,295)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:198306"
     Site            order(232,236,260..261,264,327,336,339..340)
                     /site_type="other"
                     /note="N-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:198306"
     Site            order(243..244,247..248,257,260..261,340,344)
                     /site_type="active"
                     /note="GRX-like active site [active]"
                     /db_xref="CDD:198306"
     CDS             1..372
                     /gene="PTGES2"
                     /coded_by="XM_061154553.1:37..1155"
                     /db_xref="GeneID:133064443"
ORIGIN      
        1 mahavralwp hgravawrlg drpalglhah sragftraag gsgpaaaark ggprllgaaa
       61 lalggalgly htarwhlraq dlraersaaq lslssrlqlt lyqyktcpfc skvrafldfh
      121 alpyqvvevn pvrraeikfs syrkvpivma qegeslqqln dssviisalk tylvsgqpla
      181 diityyppmk avndqgkevt efcnkywlml dekeaqrmyg gkearteemk wrqwaddwlv
      241 hiispnvyrt paealasfdy ivkegnfgtv egamakyvga aamyfiskrl krrhhlrddv
      301 redlyeaank wvaavgkdrp fmggqkpnla dlavygvlrv megleafddl mrhthiqpwy
      361 lrvekaiaea pq
//
LOCUS       XP_061010537             501 aa            linear   MAM 02-DEC-2023
DEFINITION  mitochondrial adenyl nucleotide antiporter SLC25A25 isoform X1
            [Dama dama].
ACCESSION   XP_061010537
VERSION     XP_061010537.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154554.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..501
                     /product="mitochondrial adenyl nucleotide antiporter
                     SLC25A25 isoform X1"
                     /calculated_mol_wt=55211
     Region          47..175
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     Region          223..477
                     /region_name="PTZ00169"
                     /note="ADP/ATP transporter on adenylate translocase;
                     Provisional"
                     /db_xref="CDD:240302"
     CDS             1..501
                     /gene="SLC25A25"
                     /coded_by="XM_061154554.1:86..1591"
                     /db_xref="GeneID:133064444"
ORIGIN      
        1 mvssvlcrcv aspppdpaas asssasspas vdpcggavcg gpdhrlrlws lfqtldvnrd
       61 gglcvndlav glrrlglhrt egelrkivqa gdkdldgqld feefvhylqd hekklrlvfk
      121 sldkkndgri daqeimqslr dlgvkiseqq aekilksmdk ngtmtidwhe wrdyhllhpv
      181 enipeiilyw khstifdvge nltvpdeftv eerqtgmwwr hlvagggaga vsrtctapld
      241 rlkvlmqvha srsnnmcivg gftqmiregg arslwrgngi nvlkiapesa ikfmayeqik
      301 rligsdqetl riherlvags lagaiaqssi ypmevlktrm alrktgqysg mldcarkila
      361 regmaafykg yvpnmlgiip yagidlavye tlknawlqry avnsadpgvf vllacgtmss
      421 tcgqlasypl alvrtrmqaq asmegapevt msslfkqilr tegafglyrg lapnfmkvip
      481 avsisyvvye nlkitlgvqs r
//
LOCUS       XP_061010538             469 aa            linear   MAM 02-DEC-2023
DEFINITION  mitochondrial adenyl nucleotide antiporter SLC25A25 isoform X2
            [Dama dama].
ACCESSION   XP_061010538
VERSION     XP_061010538.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154555.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..469
                     /product="mitochondrial adenyl nucleotide antiporter
                     SLC25A25 isoform X2"
                     /calculated_mol_wt=52661
     Region          39..143
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     Region          191..445
                     /region_name="PTZ00169"
                     /note="ADP/ATP transporter on adenylate translocase;
                     Provisional"
                     /db_xref="CDD:240302"
     CDS             1..469
                     /gene="SLC25A25"
                     /coded_by="XM_061154555.1:55..1464"
                     /db_xref="GeneID:133064444"
ORIGIN      
        1 mlclclyvpl igeaqtefqy feskglpael ksifklsvfi psqefstyrq wkqkivqagd
       61 kdldgqldfe efvhylqdhe kklrlvfksl dkkndgrida qeimqslrdl gvkiseqqae
      121 kilksmdkng tmtidwhewr dyhllhpven ipeiilywkh stifdvgenl tvpdeftvee
      181 rqtgmwwrhl vagggagavs rtctapldrl kvlmqvhasr snnmcivggf tqmireggar
      241 slwrgnginv lkiapesaik fmayeqikrl igsdqetlri herlvagsla gaiaqssiyp
      301 mevlktrmal rktgqysgml dcarkilare gmaafykgyv pnmlgiipya gidlavyetl
      361 knawlqryav nsadpgvfvl lacgtmsstc gqlasyplal vrtrmqaqas megapevtms
      421 slfkqilrte gafglyrgla pnfmkvipav sisyvvyenl kitlgvqsr
//
LOCUS       XP_061010540             344 aa            linear   MAM 02-DEC-2023
DEFINITION  mitochondrial adenyl nucleotide antiporter SLC25A25 isoform X3
            [Dama dama].
ACCESSION   XP_061010540
VERSION     XP_061010540.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154557.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..344
                     /product="mitochondrial adenyl nucleotide antiporter
                     SLC25A25 isoform X3"
                     /calculated_mol_wt=38089
     Region          66..320
                     /region_name="PTZ00169"
                     /note="ADP/ATP transporter on adenylate translocase;
                     Provisional"
                     /db_xref="CDD:240302"
     CDS             1..344
                     /gene="SLC25A25"
                     /coded_by="XM_061154557.1:31..1065"
                     /db_xref="GeneID:133064444"
ORIGIN      
        1 mdkngtmtid whewrdyhll hpvenipeii lywkhstifd vgenltvpde ftveerqtgm
       61 wwrhlvaggg agavsrtcta pldrlkvlmq vhasrsnnmc ivggftqmir eggarslwrg
      121 nginvlkiap esaikfmaye qikrligsdq etlriherlv agslagaiaq ssiypmevlk
      181 trmalrktgq ysgmldcark ilaregmaaf ykgyvpnmlg iipyagidla vyetlknawl
      241 qryavnsadp gvfvllacgt msstcgqlas yplalvrtrm qaqasmegap evtmsslfkq
      301 ilrtegafgl yrglapnfmk vipavsisyv vyenlkitlg vqsr
//
LOCUS       XP_061010541             489 aa            linear   MAM 02-DEC-2023
DEFINITION  mitochondrial adenyl nucleotide antiporter SLC25A25 isoform X4
            [Dama dama].
ACCESSION   XP_061010541
VERSION     XP_061010541.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154558.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..489
                     /product="mitochondrial adenyl nucleotide antiporter
                     SLC25A25 isoform X4"
                     /calculated_mol_wt=54561
     Region          <68..163
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     Region          211..465
                     /region_name="PTZ00169"
                     /note="ADP/ATP transporter on adenylate translocase;
                     Provisional"
                     /db_xref="CDD:240302"
     CDS             1..489
                     /gene="SLC25A25"
                     /coded_by="XM_061154558.1:200..1669"
                     /db_xref="GeneID:133064444"
ORIGIN      
        1 mfqmlwhfls sffpragcqg sregsgnevr gtpaparrdq mpsflgkqdg rteatekrpt
       61 illvvgpaeq fpkkivqagd kdldgqldfe efvhylqdhe kklrlvfksl dkkndgrida
      121 qeimqslrdl gvkiseqqae kilksmdkng tmtidwhewr dyhllhpven ipeiilywkh
      181 stifdvgenl tvpdeftvee rqtgmwwrhl vagggagavs rtctapldrl kvlmqvhasr
      241 snnmcivggf tqmireggar slwrgnginv lkiapesaik fmayeqikrl igsdqetlri
      301 herlvagsla gaiaqssiyp mevlktrmal rktgqysgml dcarkilare gmaafykgyv
      361 pnmlgiipya gidlavyetl knawlqryav nsadpgvfvl lacgtmsstc gqlasyplal
      421 vrtrmqaqas megapevtms slfkqilrte gafglyrgla pnfmkvipav sisyvvyenl
      481 kitlgvqsr
//
LOCUS       XP_061010542             327 aa            linear   MAM 02-DEC-2023
DEFINITION  nuclear apoptosis-inducing factor 1 [Dama dama].
ACCESSION   XP_061010542
VERSION     XP_061010542.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154559.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..327
                     /product="nuclear apoptosis-inducing factor 1"
                     /calculated_mol_wt=35079
     Region          8..85
                     /region_name="Myb_DNA-bind_5"
                     /note="Myb/SANT-like DNA-binding domain; pfam13873"
                     /db_xref="CDD:433544"
     CDS             1..327
                     /gene="NAIF1"
                     /coded_by="XM_061154559.1:230..1213"
                     /db_xref="GeneID:133064445"
ORIGIN      
        1 mavpakkrkm nfsereveii veelelkkhl lvnhfnagvp laaksaawhg ilrrvnavat
       61 crrelpevkk kwsdlktevr rkvaqvraav eggeapgpte edgaggpgtg ggsgasgpav
      121 apvlltpmqq ricnllgeat iislpstaei hpvalgptat aaaatvtltq iptettyhtl
      181 eegvveycta eappplpaea pvemmaqhad tsvkpqalks rialnsakli qeqrvtnlhv
      241 keiaqhleqq ndllqmirrs qevqacaqer qaqamegtqa alsvliqvlr pmikdfrryl
      301 qsnmpnpata sdpgqvaqng qpdsiiq
//
LOCUS       XP_061010543             385 aa            linear   MAM 02-DEC-2023
DEFINITION  early estrogen-induced gene 1 protein isoform X1 [Dama dama].
ACCESSION   XP_061010543
VERSION     XP_061010543.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154560.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..385
                     /product="early estrogen-induced gene 1 protein isoform
                     X1"
                     /calculated_mol_wt=41955
     Region          12..152
                     /region_name="NT-C2"
                     /note="N-terminal C2 in EEIG1 and EHBP1 proteins;
                     pfam10358"
                     /db_xref="CDD:463058"
     CDS             1..385
                     /gene="EEIG1"
                     /coded_by="XM_061154560.1:4..1161"
                     /db_xref="GeneID:133064446"
ORIGIN      
        1 maflmkkkkf kfqttftlee ltavpfvngv lfckvrlldg gdfvslssre evqencvrwr
       61 krftfvckms anpatglldp cifrvsvrke lkggkayskl gftdlnlaef agsgstvrcc
      121 llegydtknt rqdnsilkvt igmfllsgdp cfktppstak sisipgqdss lqltckgggt
      181 srggsssnsl tgsrppkarp tilssgvpee pdqnlsspee vfhsghsrns syasqqskis
      241 agystehsrs sslsdlthrr ntstsssasg glsmavegpe gserehrppe kpprpprpph
      301 lsersfrrkk dsveshptwv ddtridaddi vekimqsqdf tegsntedsn lrlfvsrdgt
      361 ttlsgiqlan rvssgvyepv viesh
//
LOCUS       XP_061010544             384 aa            linear   MAM 02-DEC-2023
DEFINITION  early estrogen-induced gene 1 protein isoform X2 [Dama dama].
ACCESSION   XP_061010544
VERSION     XP_061010544.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154561.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..384
                     /product="early estrogen-induced gene 1 protein isoform
                     X2"
                     /calculated_mol_wt=41884
     Region          12..152
                     /region_name="NT-C2"
                     /note="N-terminal C2 in EEIG1 and EHBP1 proteins;
                     pfam10358"
                     /db_xref="CDD:463058"
     CDS             1..384
                     /gene="EEIG1"
                     /coded_by="XM_061154561.1:4..1158"
                     /db_xref="GeneID:133064446"
ORIGIN      
        1 maflmkkkkf kfqttftlee ltavpfvngv lfckvrlldg gdfvslssre evqencvrwr
       61 krftfvckms anpatglldp cifrvsvrke lkggkayskl gftdlnlaef agsgstvrcc
      121 llegydtknt rqdnsilkvt igmfllsgdp cfktppstak sisipgqdss lqltckgggt
      181 srggsssnsl tgsrppkarp tilssgvpee pdqnlsspee vfhsghsrns syasqqskis
      241 gystehsrss slsdlthrrn tstsssasgg lsmavegpeg serehrppek pprpprpphl
      301 sersfrrkkd sveshptwvd dtridaddiv ekimqsqdft egsntedsnl rlfvsrdgtt
      361 tlsgiqlanr vssgvyepvv iesh
//
LOCUS       XP_061010545              84 aa            linear   MAM 02-DEC-2023
DEFINITION  dolichol phosphate-mannose biosynthesis regulatory protein [Dama
            dama].
ACCESSION   XP_061010545
VERSION     XP_061010545.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154562.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..84
                     /product="dolichol phosphate-mannose biosynthesis
                     regulatory protein"
                     /calculated_mol_wt=9252
     Region          5..78
                     /region_name="DPM2"
                     /note="Dolichol phosphate-mannose biosynthesis regulatory
                     protein (DPM2); pfam07297"
                     /db_xref="CDD:462138"
     CDS             1..84
                     /gene="DPM2"
                     /coded_by="XM_061154562.1:122..376"
                     /db_xref="GeneID:133064447"
ORIGIN      
        1 matgtdqvvg lglvalslii ftyytawvil lpfidsqhvi hkyflpraya iaiplaagll
       61 lllfvgifit yvmlknqkdt kkvq
//
LOCUS       XP_061010546             323 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,
            3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase isoform X1
            [Dama dama].
ACCESSION   XP_061010546
VERSION     XP_061010546.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154563.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..323
                     /product="alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,
                     3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase
                     isoform X1"
                     /calculated_mol_wt=36422
     Region          73..300
                     /region_name="GT29_ST6GALNAC4"
                     /note="alpha-N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 4; cd23977"
                     /db_xref="CDD:467705"
     Site            order(80..82,103..104,125,212..214,232..233,248..250,274)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:467705"
     CDS             1..323
                     /gene="ST6GALNAC4"
                     /coded_by="XM_061154563.1:216..1187"
                     /db_xref="GeneID:133064448"
ORIGIN      
        1 mkapgrllli vlcsagfsav yillccwacv pfcpaacldp hlsinsrptv pgplhfsgys
       61 svpdgkplvr epcrscavvs ssgqmlgsgl gaeidgaecv lrmnqaptmg feadvgqrst
      121 lrvishtsvp lllrnyshyf qqardtlyvv wgqgkhmdra lggrtyrall qltrmypglq
      181 vytftermma ycdqvfqdet gknrrqsgsf lstgwftmil alelceeivv ygmvsdsycr
      241 eehhpsvpyh yfekgrldec qmylaherap rsahrfitek tvfsrwakkr pivfahpswr
      301 mqwphrhsai trpllqphsa knt
//
LOCUS       XP_061010547             292 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,
            3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase isoform X2
            [Dama dama].
ACCESSION   XP_061010547
VERSION     XP_061010547.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154564.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..292
                     /product="alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,
                     3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase
                     isoform X2"
                     /calculated_mol_wt=32866
     Region          73..269
                     /region_name="GT29"
                     /note="glycosyltransferase family 29; cl45931"
                     /db_xref="CDD:480271"
     Site            order(80..82,103..104,125,181..183,201..202,217..219,243)
                     /site_type="active"
                     /db_xref="CDD:467690"
     CDS             1..292
                     /gene="ST6GALNAC4"
                     /coded_by="XM_061154564.1:216..1094"
                     /db_xref="GeneID:133064448"
ORIGIN      
        1 mkapgrllli vlcsagfsav yillccwacv pfcpaacldp hlsinsrptv pgplhfsgys
       61 svpdgkplvr epcrscavvs ssgqmlgsgl gaeidgaecv lrmnqaptmg feadvgqrst
      121 lrvishtsvp lllrnyshyf qqardtlyvv ytftermmay cdqvfqdetg knrrqsgsfl
      181 stgwftmila lelceeivvy gmvsdsycre ehhpsvpyhy fekgrldecq mylaherapr
      241 sahrfitekt vfsrwakkrp ivfahpswrm qwphrhsait rpllqphsak nt
//
LOCUS       XP_061010548             256 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,
            3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase isoform X3
            [Dama dama].
ACCESSION   XP_061010548
VERSION     XP_061010548.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154565.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..256
                     /product="alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,
                     3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase
                     isoform X3"
                     /calculated_mol_wt=28791
     Region          73..233
                     /region_name="GT29"
                     /note="glycosyltransferase family 29; cl45931"
                     /db_xref="CDD:480271"
     CDS             1..256
                     /gene="ST6GALNAC4"
                     /coded_by="XM_061154565.1:216..986"
                     /db_xref="GeneID:133064448"
ORIGIN      
        1 mkapgrllli vlcsagfsav yillccwacv pfcpaacldp hlsinsrptv pgplhfsgys
       61 svpdgkplvr epcrscavvs ssgqmlgsgl gaeidgaecv lrmnqaptmg feadvgqrst
      121 lrvishtsvp lllrnyshyf qqardtlyvv ytftermmay cdqvfqdetg knreehhpsv
      181 pyhyfekgrl decqmylahe raprsahrfi tektvfsrwa kkrpivfahp swrmqwphrh
      241 saitrpllqp hsaknt
//
LOCUS       XP_061010549             239 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,
            3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase isoform X4
            [Dama dama].
ACCESSION   XP_061010549
VERSION     XP_061010549.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154566.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..239
                     /product="alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,
                     3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase
                     isoform X4"
                     /calculated_mol_wt=27621
     Region          1..216
                     /region_name="GT29"
                     /note="glycosyltransferase family 29; cl45931"
                     /db_xref="CDD:480271"
     Site            order(19..20,41,128..130,148..149,164..166,190)
                     /site_type="active"
                     /db_xref="CDD:467690"
     CDS             1..239
                     /gene="ST6GALNAC4"
                     /coded_by="XM_061154566.1:380..1099"
                     /db_xref="GeneID:133064448"
ORIGIN      
        1 mlgsglgaei dgaecvlrmn qaptmgfead vgqrstlrvi shtsvplllr nyshyfqqar
       61 dtlyvvwgqg khmdralggr tyrallqltr mypglqvytf termmaycdq vfqdetgknr
      121 rqsgsflstg wftmilalel ceeivvygmv sdsycreehh psvpyhyfek grldecqmyl
      181 aheraprsah rfitektvfs rwakkrpivf ahpswrmqwp hrhsaitrpl lqphsaknt
//
LOCUS       XP_061010550             332 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform
            X1 [Dama dama].
ACCESSION   XP_061010550
VERSION     XP_061010550.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154567.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..332
                     /product="alpha-N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 6 isoform X1"
                     /calculated_mol_wt=37876
     Region          104..331
                     /region_name="GT29_ST6GALNAC6"
                     /note="alpha-N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 6; cd23978"
                     /db_xref="CDD:467706"
     Site            order(111..113,134..135,156,242..244,262..263,279..281,
                     306)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:467706"
     CDS             1..332
                     /gene="ST6GALNAC6"
                     /coded_by="XM_061154567.1:137..1135"
                     /db_xref="GeneID:133064450"
ORIGIN      
        1 macprplsqc dptplpgppa ghwplplsrr rremksnkeq rsavfvilfa litililyss
       61 nsanevfhyg slqgrtrrpv nlrkwsltdg yipilgnktl psrcgqcviv tssshllgtk
      121 lgpeieraec tirmndaptt gysadvgnkt tfrvvahssv fhvlrkpqef vnrtpetvfi
      181 fwgppnkmqk pqgslvriiq ragllfpnme ayaislsrmr qfddlfrset grdrekshsw
      241 lstgwftmvi avelcdhvhv ygmvppdycs lrphlqrmpy hyyepkgpde cvtyiqnens
      301 rkgnhhrfit ekrvfsswaq vygitfshps wt
//
LOCUS       XP_061010551             299 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform
            X2 [Dama dama].
ACCESSION   XP_061010551
VERSION     XP_061010551.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154568.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..299
                     /product="alpha-N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 6 isoform X2"
                     /calculated_mol_wt=34203
     Region          71..298
                     /region_name="GT29_ST6GALNAC6"
                     /note="alpha-N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 6; cd23978"
                     /db_xref="CDD:467706"
     Site            order(78..80,101..102,123,209..211,229..230,246..248,273)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:467706"
     CDS             1..299
                     /gene="ST6GALNAC6"
                     /coded_by="XM_061154568.1:352..1251"
                     /db_xref="GeneID:133064450"
ORIGIN      
        1 mksnkeqrsa vfvilfalit ililyssnsa nevfhygslq grtrrpvnlr kwsltdgyip
       61 ilgnktlpsr cgqcvivtss shllgtklgp eieraectir mndapttgys advgnkttfr
      121 vvahssvfhv lrkpqefvnr tpetvfifwg ppnkmqkpqg slvriiqrag llfpnmeaya
      181 islsrmrqfd dlfrsetgrd rekshswlst gwftmviave lcdhvhvygm vppdycslrp
      241 hlqrmpyhyy epkgpdecvt yiqnensrkg nhhrfitekr vfsswaqvyg itfshpswt
//
LOCUS       XP_061010553             299 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform
            X2 [Dama dama].
ACCESSION   XP_061010553
VERSION     XP_061010553.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154570.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..299
                     /product="alpha-N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 6 isoform X2"
                     /calculated_mol_wt=34203
     Region          71..298
                     /region_name="GT29_ST6GALNAC6"
                     /note="alpha-N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 6; cd23978"
                     /db_xref="CDD:467706"
     Site            order(78..80,101..102,123,209..211,229..230,246..248,273)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:467706"
     CDS             1..299
                     /gene="ST6GALNAC6"
                     /coded_by="XM_061154570.1:399..1298"
                     /db_xref="GeneID:133064450"
ORIGIN      
        1 mksnkeqrsa vfvilfalit ililyssnsa nevfhygslq grtrrpvnlr kwsltdgyip
       61 ilgnktlpsr cgqcvivtss shllgtklgp eieraectir mndapttgys advgnkttfr
      121 vvahssvfhv lrkpqefvnr tpetvfifwg ppnkmqkpqg slvriiqrag llfpnmeaya
      181 islsrmrqfd dlfrsetgrd rekshswlst gwftmviave lcdhvhvygm vppdycslrp
      241 hlqrmpyhyy epkgpdecvt yiqnensrkg nhhrfitekr vfsswaqvyg itfshpswt
//
LOCUS       XP_061010554             299 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform
            X2 [Dama dama].
ACCESSION   XP_061010554
VERSION     XP_061010554.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154571.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..299
                     /product="alpha-N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 6 isoform X2"
                     /calculated_mol_wt=34203
     Region          71..298
                     /region_name="GT29_ST6GALNAC6"
                     /note="alpha-N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 6; cd23978"
                     /db_xref="CDD:467706"
     Site            order(78..80,101..102,123,209..211,229..230,246..248,273)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:467706"
     CDS             1..299
                     /gene="ST6GALNAC6"
                     /coded_by="XM_061154571.1:462..1361"
                     /db_xref="GeneID:133064450"
ORIGIN      
        1 mksnkeqrsa vfvilfalit ililyssnsa nevfhygslq grtrrpvnlr kwsltdgyip
       61 ilgnktlpsr cgqcvivtss shllgtklgp eieraectir mndapttgys advgnkttfr
      121 vvahssvfhv lrkpqefvnr tpetvfifwg ppnkmqkpqg slvriiqrag llfpnmeaya
      181 islsrmrqfd dlfrsetgrd rekshswlst gwftmviave lcdhvhvygm vppdycslrp
      241 hlqrmpyhyy epkgpdecvt yiqnensrkg nhhrfitekr vfsswaqvyg itfshpswt
//
LOCUS       XP_061010555             299 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform
            X2 [Dama dama].
ACCESSION   XP_061010555
VERSION     XP_061010555.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154572.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..299
                     /product="alpha-N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 6 isoform X2"
                     /calculated_mol_wt=34203
     Region          71..298
                     /region_name="GT29_ST6GALNAC6"
                     /note="alpha-N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 6; cd23978"
                     /db_xref="CDD:467706"
     Site            order(78..80,101..102,123,209..211,229..230,246..248,273)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:467706"
     CDS             1..299
                     /gene="ST6GALNAC6"
                     /coded_by="XM_061154572.1:415..1314"
                     /db_xref="GeneID:133064450"
ORIGIN      
        1 mksnkeqrsa vfvilfalit ililyssnsa nevfhygslq grtrrpvnlr kwsltdgyip
       61 ilgnktlpsr cgqcvivtss shllgtklgp eieraectir mndapttgys advgnkttfr
      121 vvahssvfhv lrkpqefvnr tpetvfifwg ppnkmqkpqg slvriiqrag llfpnmeaya
      181 islsrmrqfd dlfrsetgrd rekshswlst gwftmviave lcdhvhvygm vppdycslrp
      241 hlqrmpyhyy epkgpdecvt yiqnensrkg nhhrfitekr vfsswaqvyg itfshpswt
//
LOCUS       XP_061010556             299 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform
            X2 [Dama dama].
ACCESSION   XP_061010556
VERSION     XP_061010556.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154573.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..299
                     /product="alpha-N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 6 isoform X2"
                     /calculated_mol_wt=34203
     Region          71..298
                     /region_name="GT29_ST6GALNAC6"
                     /note="alpha-N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 6; cd23978"
                     /db_xref="CDD:467706"
     Site            order(78..80,101..102,123,209..211,229..230,246..248,273)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:467706"
     CDS             1..299
                     /gene="ST6GALNAC6"
                     /coded_by="XM_061154573.1:155..1054"
                     /db_xref="GeneID:133064450"
ORIGIN      
        1 mksnkeqrsa vfvilfalit ililyssnsa nevfhygslq grtrrpvnlr kwsltdgyip
       61 ilgnktlpsr cgqcvivtss shllgtklgp eieraectir mndapttgys advgnkttfr
      121 vvahssvfhv lrkpqefvnr tpetvfifwg ppnkmqkpqg slvriiqrag llfpnmeaya
      181 islsrmrqfd dlfrsetgrd rekshswlst gwftmviave lcdhvhvygm vppdycslrp
      241 hlqrmpyhyy epkgpdecvt yiqnensrkg nhhrfitekr vfsswaqvyg itfshpswt
//
LOCUS       XP_061010557             299 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform
            X2 [Dama dama].
ACCESSION   XP_061010557
VERSION     XP_061010557.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154574.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..299
                     /product="alpha-N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 6 isoform X2"
                     /calculated_mol_wt=34203
     Region          71..298
                     /region_name="GT29_ST6GALNAC6"
                     /note="alpha-N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 6; cd23978"
                     /db_xref="CDD:467706"
     Site            order(78..80,101..102,123,209..211,229..230,246..248,273)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:467706"
     CDS             1..299
                     /gene="ST6GALNAC6"
                     /coded_by="XM_061154574.1:137..1036"
                     /db_xref="GeneID:133064450"
ORIGIN      
        1 mksnkeqrsa vfvilfalit ililyssnsa nevfhygslq grtrrpvnlr kwsltdgyip
       61 ilgnktlpsr cgqcvivtss shllgtklgp eieraectir mndapttgys advgnkttfr
      121 vvahssvfhv lrkpqefvnr tpetvfifwg ppnkmqkpqg slvriiqrag llfpnmeaya
      181 islsrmrqfd dlfrsetgrd rekshswlst gwftmviave lcdhvhvygm vppdycslrp
      241 hlqrmpyhyy epkgpdecvt yiqnensrkg nhhrfitekr vfsswaqvyg itfshpswt
//
LOCUS       XP_061010558             299 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform
            X2 [Dama dama].
ACCESSION   XP_061010558
VERSION     XP_061010558.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154575.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..299
                     /product="alpha-N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 6 isoform X2"
                     /calculated_mol_wt=34203
     Region          71..298
                     /region_name="GT29_ST6GALNAC6"
                     /note="alpha-N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 6; cd23978"
                     /db_xref="CDD:467706"
     Site            order(78..80,101..102,123,209..211,229..230,246..248,273)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:467706"
     CDS             1..299
                     /gene="ST6GALNAC6"
                     /coded_by="XM_061154575.1:262..1161"
                     /db_xref="GeneID:133064450"
ORIGIN      
        1 mksnkeqrsa vfvilfalit ililyssnsa nevfhygslq grtrrpvnlr kwsltdgyip
       61 ilgnktlpsr cgqcvivtss shllgtklgp eieraectir mndapttgys advgnkttfr
      121 vvahssvfhv lrkpqefvnr tpetvfifwg ppnkmqkpqg slvriiqrag llfpnmeaya
      181 islsrmrqfd dlfrsetgrd rekshswlst gwftmviave lcdhvhvygm vppdycslrp
      241 hlqrmpyhyy epkgpdecvt yiqnensrkg nhhrfitekr vfsswaqvyg itfshpswt
//
LOCUS       XP_061010559             299 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform
            X2 [Dama dama].
ACCESSION   XP_061010559
VERSION     XP_061010559.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154576.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..299
                     /product="alpha-N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 6 isoform X2"
                     /calculated_mol_wt=34203
     Region          71..298
                     /region_name="GT29_ST6GALNAC6"
                     /note="alpha-N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 6; cd23978"
                     /db_xref="CDD:467706"
     Site            order(78..80,101..102,123,209..211,229..230,246..248,273)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:467706"
     CDS             1..299
                     /gene="ST6GALNAC6"
                     /coded_by="XM_061154576.1:376..1275"
                     /db_xref="GeneID:133064450"
ORIGIN      
        1 mksnkeqrsa vfvilfalit ililyssnsa nevfhygslq grtrrpvnlr kwsltdgyip
       61 ilgnktlpsr cgqcvivtss shllgtklgp eieraectir mndapttgys advgnkttfr
      121 vvahssvfhv lrkpqefvnr tpetvfifwg ppnkmqkpqg slvriiqrag llfpnmeaya
      181 islsrmrqfd dlfrsetgrd rekshswlst gwftmviave lcdhvhvygm vppdycslrp
      241 hlqrmpyhyy epkgpdecvt yiqnensrkg nhhrfitekr vfsswaqvyg itfshpswt
//
LOCUS       XP_061010560             295 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform
            X3 [Dama dama].
ACCESSION   XP_061010560
VERSION     XP_061010560.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154577.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..295
                     /product="alpha-N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 6 isoform X3"
                     /calculated_mol_wt=33746
     Region          67..294
                     /region_name="GT29_ST6GALNAC6"
                     /note="alpha-N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 6; cd23978"
                     /db_xref="CDD:467706"
     Site            order(74..76,97..98,119,205..207,225..226,242..244,269)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:467706"
     CDS             1..295
                     /gene="ST6GALNAC6"
                     /coded_by="XM_061154577.1:609..1496"
                     /db_xref="GeneID:133064450"
ORIGIN      
        1 meqrsavfvi lfalitilil yssnsanevf hygslqgrtr rpvnlrkwsl tdgyipilgn
       61 ktlpsrcgqc vivtssshll gtklgpeier aectirmnda pttgysadvg nkttfrvvah
      121 ssvfhvlrkp qefvnrtpet vfifwgppnk mqkpqgslvr iiqragllfp nmeayaisls
      181 rmrqfddlfr setgrdreks hswlstgwft mviavelcdh vhvygmvppd ycslrphlqr
      241 mpyhyyepkg pdecvtyiqn ensrkgnhhr fitekrvfss waqvygitfs hpswt
//
LOCUS       XP_061010561             295 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform
            X3 [Dama dama].
ACCESSION   XP_061010561
VERSION     XP_061010561.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154578.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..295
                     /product="alpha-N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 6 isoform X3"
                     /calculated_mol_wt=33746
     Region          67..294
                     /region_name="GT29_ST6GALNAC6"
                     /note="alpha-N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 6; cd23978"
                     /db_xref="CDD:467706"
     Site            order(74..76,97..98,119,205..207,225..226,242..244,269)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:467706"
     CDS             1..295
                     /gene="ST6GALNAC6"
                     /coded_by="XM_061154578.1:315..1202"
                     /db_xref="GeneID:133064450"
ORIGIN      
        1 meqrsavfvi lfalitilil yssnsanevf hygslqgrtr rpvnlrkwsl tdgyipilgn
       61 ktlpsrcgqc vivtssshll gtklgpeier aectirmnda pttgysadvg nkttfrvvah
      121 ssvfhvlrkp qefvnrtpet vfifwgppnk mqkpqgslvr iiqragllfp nmeayaisls
      181 rmrqfddlfr setgrdreks hswlstgwft mviavelcdh vhvygmvppd ycslrphlqr
      241 mpyhyyepkg pdecvtyiqn ensrkgnhhr fitekrvfss waqvygitfs hpswt
//
LOCUS       XP_061010562             295 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform
            X3 [Dama dama].
ACCESSION   XP_061010562
VERSION     XP_061010562.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154579.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..295
                     /product="alpha-N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 6 isoform X3"
                     /calculated_mol_wt=33746
     Region          67..294
                     /region_name="GT29_ST6GALNAC6"
                     /note="alpha-N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 6; cd23978"
                     /db_xref="CDD:467706"
     Site            order(74..76,97..98,119,205..207,225..226,242..244,269)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:467706"
     CDS             1..295
                     /gene="ST6GALNAC6"
                     /coded_by="XM_061154579.1:546..1433"
                     /db_xref="GeneID:133064450"
ORIGIN      
        1 meqrsavfvi lfalitilil yssnsanevf hygslqgrtr rpvnlrkwsl tdgyipilgn
       61 ktlpsrcgqc vivtssshll gtklgpeier aectirmnda pttgysadvg nkttfrvvah
      121 ssvfhvlrkp qefvnrtpet vfifwgppnk mqkpqgslvr iiqragllfp nmeayaisls
      181 rmrqfddlfr setgrdreks hswlstgwft mviavelcdh vhvygmvppd ycslrphlqr
      241 mpyhyyepkg pdecvtyiqn ensrkgnhhr fitekrvfss waqvygitfs hpswt
//
LOCUS       XP_061010564             295 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform
            X3 [Dama dama].
ACCESSION   XP_061010564
VERSION     XP_061010564.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154581.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..295
                     /product="alpha-N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 6 isoform X3"
                     /calculated_mol_wt=33746
     Region          67..294
                     /region_name="GT29_ST6GALNAC6"
                     /note="alpha-N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 6; cd23978"
                     /db_xref="CDD:467706"
     Site            order(74..76,97..98,119,205..207,225..226,242..244,269)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:467706"
     CDS             1..295
                     /gene="ST6GALNAC6"
                     /coded_by="XM_061154581.1:759..1646"
                     /db_xref="GeneID:133064450"
ORIGIN      
        1 meqrsavfvi lfalitilil yssnsanevf hygslqgrtr rpvnlrkwsl tdgyipilgn
       61 ktlpsrcgqc vivtssshll gtklgpeier aectirmnda pttgysadvg nkttfrvvah
      121 ssvfhvlrkp qefvnrtpet vfifwgppnk mqkpqgslvr iiqragllfp nmeayaisls
      181 rmrqfddlfr setgrdreks hswlstgwft mviavelcdh vhvygmvppd ycslrphlqr
      241 mpyhyyepkg pdecvtyiqn ensrkgnhhr fitekrvfss waqvygitfs hpswt
//
LOCUS       XP_061010565             295 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform
            X3 [Dama dama].
ACCESSION   XP_061010565
VERSION     XP_061010565.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154582.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..295
                     /product="alpha-N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 6 isoform X3"
                     /calculated_mol_wt=33746
     Region          67..294
                     /region_name="GT29_ST6GALNAC6"
                     /note="alpha-N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 6; cd23978"
                     /db_xref="CDD:467706"
     Site            order(74..76,97..98,119,205..207,225..226,242..244,269)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:467706"
     CDS             1..295
                     /gene="ST6GALNAC6"
                     /coded_by="XM_061154582.1:287..1174"
                     /db_xref="GeneID:133064450"
ORIGIN      
        1 meqrsavfvi lfalitilil yssnsanevf hygslqgrtr rpvnlrkwsl tdgyipilgn
       61 ktlpsrcgqc vivtssshll gtklgpeier aectirmnda pttgysadvg nkttfrvvah
      121 ssvfhvlrkp qefvnrtpet vfifwgppnk mqkpqgslvr iiqragllfp nmeayaisls
      181 rmrqfddlfr setgrdreks hswlstgwft mviavelcdh vhvygmvppd ycslrphlqr
      241 mpyhyyepkg pdecvtyiqn ensrkgnhhr fitekrvfss waqvygitfs hpswt
//
LOCUS       XP_061010566             295 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform
            X3 [Dama dama].
ACCESSION   XP_061010566
VERSION     XP_061010566.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154583.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..295
                     /product="alpha-N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 6 isoform X3"
                     /calculated_mol_wt=33746
     Region          67..294
                     /region_name="GT29_ST6GALNAC6"
                     /note="alpha-N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 6; cd23978"
                     /db_xref="CDD:467706"
     Site            order(74..76,97..98,119,205..207,225..226,242..244,269)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:467706"
     CDS             1..295
                     /gene="ST6GALNAC6"
                     /coded_by="XM_061154583.1:286..1173"
                     /db_xref="GeneID:133064450"
ORIGIN      
        1 meqrsavfvi lfalitilil yssnsanevf hygslqgrtr rpvnlrkwsl tdgyipilgn
       61 ktlpsrcgqc vivtssshll gtklgpeier aectirmnda pttgysadvg nkttfrvvah
      121 ssvfhvlrkp qefvnrtpet vfifwgppnk mqkpqgslvr iiqragllfp nmeayaisls
      181 rmrqfddlfr setgrdreks hswlstgwft mviavelcdh vhvygmvppd ycslrphlqr
      241 mpyhyyepkg pdecvtyiqn ensrkgnhhr fitekrvfss waqvygitfs hpswt
//
LOCUS       XP_061010567             299 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform
            X2 [Dama dama].
ACCESSION   XP_061010567
VERSION     XP_061010567.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154584.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..299
                     /product="alpha-N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 6 isoform X2"
                     /calculated_mol_wt=34203
     Region          71..298
                     /region_name="GT29_ST6GALNAC6"
                     /note="alpha-N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 6; cd23978"
                     /db_xref="CDD:467706"
     Site            order(78..80,101..102,123,209..211,229..230,246..248,273)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:467706"
     CDS             1..299
                     /gene="ST6GALNAC6"
                     /coded_by="XM_061154584.1:183..1082"
                     /db_xref="GeneID:133064450"
ORIGIN      
        1 mksnkeqrsa vfvilfalit ililyssnsa nevfhygslq grtrrpvnlr kwsltdgyip
       61 ilgnktlpsr cgqcvivtss shllgtklgp eieraectir mndapttgys advgnkttfr
      121 vvahssvfhv lrkpqefvnr tpetvfifwg ppnkmqkpqg slvriiqrag llfpnmeaya
      181 islsrmrqfd dlfrsetgrd rekshswlst gwftmviave lcdhvhvygm vppdycslrp
      241 hlqrmpyhyy epkgpdecvt yiqnensrkg nhhrfitekr vfsswaqvyg itfshpswt
//
LOCUS       XP_061010568             194 aa            linear   MAM 02-DEC-2023
DEFINITION  adenylate kinase isoenzyme 1 [Dama dama].
ACCESSION   XP_061010568
VERSION     XP_061010568.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154585.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..194
                     /product="adenylate kinase isoenzyme 1"
                     /calculated_mol_wt=21506
     Region          6..193
                     /region_name="aden_kin_iso1"
                     /note="adenylate kinase, isozyme 1 subfamily; TIGR01360"
                     /db_xref="CDD:130427"
     CDS             1..194
                     /gene="AK1"
                     /coded_by="XM_061154585.1:148..732"
                     /db_xref="GeneID:133064452"
ORIGIN      
        1 meeklkktki ifvvggpgsg kgtqcekivq kygythlstg dllraevssg sargkmlsei
       61 mekgqlvple tvldmlrdam vakvdtskgf lidgyprevq qgeeferria qptlllyvda
      121 gpetmtkrll krgetsgrvd dneetikkrl etyykatepv iafyekrgiv rkvnaegsvd
      181 svfsqvcthl dalk
//
LOCUS       XP_061010569             194 aa            linear   MAM 02-DEC-2023
DEFINITION  adenylate kinase isoenzyme 1 [Dama dama].
ACCESSION   XP_061010569
VERSION     XP_061010569.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154586.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..194
                     /product="adenylate kinase isoenzyme 1"
                     /calculated_mol_wt=21506
     Region          6..193
                     /region_name="aden_kin_iso1"
                     /note="adenylate kinase, isozyme 1 subfamily; TIGR01360"
                     /db_xref="CDD:130427"
     CDS             1..194
                     /gene="AK1"
                     /coded_by="XM_061154586.1:113..697"
                     /db_xref="GeneID:133064452"
ORIGIN      
        1 meeklkktki ifvvggpgsg kgtqcekivq kygythlstg dllraevssg sargkmlsei
       61 mekgqlvple tvldmlrdam vakvdtskgf lidgyprevq qgeeferria qptlllyvda
      121 gpetmtkrll krgetsgrvd dneetikkrl etyykatepv iafyekrgiv rkvnaegsvd
      181 svfsqvcthl dalk
//
LOCUS       XP_061010570             194 aa            linear   MAM 02-DEC-2023
DEFINITION  adenylate kinase isoenzyme 1 [Dama dama].
ACCESSION   XP_061010570
VERSION     XP_061010570.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154587.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..194
                     /product="adenylate kinase isoenzyme 1"
                     /calculated_mol_wt=21506
     Region          6..193
                     /region_name="aden_kin_iso1"
                     /note="adenylate kinase, isozyme 1 subfamily; TIGR01360"
                     /db_xref="CDD:130427"
     CDS             1..194
                     /gene="AK1"
                     /coded_by="XM_061154587.1:99..683"
                     /db_xref="GeneID:133064452"
ORIGIN      
        1 meeklkktki ifvvggpgsg kgtqcekivq kygythlstg dllraevssg sargkmlsei
       61 mekgqlvple tvldmlrdam vakvdtskgf lidgyprevq qgeeferria qptlllyvda
      121 gpetmtkrll krgetsgrvd dneetikkrl etyykatepv iafyekrgiv rkvnaegsvd
      181 svfsqvcthl dalk
//
LOCUS       XP_061010571             194 aa            linear   MAM 02-DEC-2023
DEFINITION  adenylate kinase isoenzyme 1 [Dama dama].
ACCESSION   XP_061010571
VERSION     XP_061010571.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154588.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..194
                     /product="adenylate kinase isoenzyme 1"
                     /calculated_mol_wt=21506
     Region          6..193
                     /region_name="aden_kin_iso1"
                     /note="adenylate kinase, isozyme 1 subfamily; TIGR01360"
                     /db_xref="CDD:130427"
     CDS             1..194
                     /gene="AK1"
                     /coded_by="XM_061154588.1:83..667"
                     /db_xref="GeneID:133064452"
ORIGIN      
        1 meeklkktki ifvvggpgsg kgtqcekivq kygythlstg dllraevssg sargkmlsei
       61 mekgqlvple tvldmlrdam vakvdtskgf lidgyprevq qgeeferria qptlllyvda
      121 gpetmtkrll krgetsgrvd dneetikkrl etyykatepv iafyekrgiv rkvnaegsvd
      181 svfsqvcthl dalk
//
LOCUS       XP_061010572             656 aa            linear   MAM 02-DEC-2023
DEFINITION  endoglin isoform X1 [Dama dama].
ACCESSION   XP_061010572
VERSION     XP_061010572.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154589.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..656
                     /product="endoglin isoform X1"
                     /calculated_mol_wt=70659
     Region          359..>497
                     /region_name="ZP"
                     /note="Zona pellucida (ZP) domain; smart00241"
                     /db_xref="CDD:214579"
     CDS             1..656
                     /gene="ENG"
                     /coded_by="XM_061154589.1:368..2338"
                     /db_xref="GeneID:133064453"
ORIGIN      
        1 mdrgvlcqav alllvvcslg ptslaetvyc dlqpvdskvt ygmsqvsegc vaqipdatle
       61 vhvlfltfqg diselkltlq tskqggirpr evllilsvnk siflklqapg iplqlaydpk
      121 lvipealdan ttqlpsfttk dqllnwattk gpiasaaeln dpetillrld qasssplcil
      181 epqkamghtl ewsrkayapv rgcrlegvag hkeahilril pgpeawprtv tvklelncaw
      241 rdtdaavlil qgppyvswli danhnmqiwt tgeyslkifp drinpgfqlp nttqgllgea
      301 qrlnasvvas fvelpltsdv slkthscgsg lqpsptpvei ttankgcnqe llltliqpkc
      361 ssdgmtlvlk kdlistllct itsltfwdss cqaeetedef vlssgysscg mevvenvvsn
      421 evvirllsss spqrrkvqci itdnlslqlg lylsphflqa sntielgqqg fvqvsvspsi
      481 pelkiqlesc qlnlgpdiei veliqgqeak sscvsllsps psgdirfsfl lrgymvpmpt
      541 tgilscsvtm hpgirslalf flqevqktvs mrlnivsagl pdkglvlpav lgitfgafli
      601 galltaalwy iyshtrhpgk repvvavaap assessstnh sigstqstpc stssma
//
LOCUS       XP_061010574             650 aa            linear   MAM 02-DEC-2023
DEFINITION  endoglin isoform X2 [Dama dama].
ACCESSION   XP_061010574
VERSION     XP_061010574.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154591.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..650
                     /product="endoglin isoform X2"
                     /calculated_mol_wt=69939
     Region          359..>497
                     /region_name="ZP"
                     /note="Zona pellucida (ZP) domain; smart00241"
                     /db_xref="CDD:214579"
     CDS             1..650
                     /gene="ENG"
                     /coded_by="XM_061154591.1:367..2319"
                     /db_xref="GeneID:133064453"
ORIGIN      
        1 mdrgvlcqav alllvvcslg ptslaetvyc dlqpvdskvt ygmsqvsegc vaqipdatle
       61 vhvlfltfqg diselkltlq tskqggirpr evllilsvnk siflklqapg iplqlaydpk
      121 lvipealdan ttqlpsfttk dqllnwattk gpiasaaeln dpetillrld qasssplcil
      181 epqkamghtl ewsrkayapv rgcrlegvag hkeahilril pgpeawprtv tvklelncaw
      241 rdtdaavlil qgppyvswli danhnmqiwt tgeyslkifp drinpgfqlp nttqgllgea
      301 qrlnasvvas fvelpltsdv slkthscgsg lqpsptpvei ttankgcnqe llltliqpkc
      361 ssdgmtlvlk kdlistllct itsltfwdss cqaeetedef vlssgysscg mevvenvvsn
      421 evvirllsss spqrrkvqci itdnlslqlg lylsphflqa sntielgqqg fvqvsvspsi
      481 pelkiqlesc qlnlgpdiei veliqgqeak sscvsllsps psgdirfsfl lrgymvpmpt
      541 tgilscsvtm hpgirslevq ktvsmrlniv saglpdkglv lpavlgitfg afligallta
      601 alwyiyshtr hpgkrepvva vaapassess stnhsigstq stpcstssma
//
LOCUS       XP_061010575             585 aa            linear   MAM 02-DEC-2023
DEFINITION  folylpolyglutamate synthase, mitochondrial isoform X1 [Dama dama].
ACCESSION   XP_061010575
VERSION     XP_061010575.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154592.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..585
                     /product="folylpolyglutamate synthase, mitochondrial
                     isoform X1"
                     /calculated_mol_wt=64590
     Region          41..579
                     /region_name="PLN02881"
                     /note="tetrahydrofolylpolyglutamate synthase; cl47075"
                     /db_xref="CDD:481415"
     CDS             1..585
                     /gene="FPGS"
                     /coded_by="XM_061154592.1:1401..3158"
                     /db_xref="GeneID:133064454"
ORIGIN      
        1 msrarchalf laavsprgat tgvaarrgls awpvlqepgm eyqdavrtln tlqtnanyle
       61 mvkrergdpq tqleamklyl arsglqvedl dqlniihitg tkgkgstcaf terilrsygl
      121 ktgffssphl vqvreririn gqpisselft khfwrlyhrl eetkddsscv smpgyfrflt
      181 lmafhvflqe kvdlavvevg iggaydctni irkpvvcgit slgidhtgll gdtmekiawq
      241 kggifksgvp aftvpqpdep lavlrdraqq iscplylcpp lqaleeggpp ltlglegehq
      301 rsnaalalql arcwlqqkgy qdagelkasr pslpgqlpla pvfqptphmq qglwhtewpg
      361 rtqllrrgpl twyldgahtt ssmqacvrwf rqalhrcqrp dsgsevrvll fnstgdrdsa
      421 allkllqpcq fdyaifcpnl aemastdnad qqnftvtldq vllrclthqq hwsrlheeqa
      481 spdpwstpsr eqggpaslll aphpphthsa sslifscish alqwitqgrd pvfqpprppr
      541 gllahpvads gavvlqeaaa vhvlvtgslh lvggvlklle pslsq
//
LOCUS       XP_061010576             549 aa            linear   MAM 02-DEC-2023
DEFINITION  folylpolyglutamate synthase, mitochondrial isoform X2 [Dama dama].
ACCESSION   XP_061010576
VERSION     XP_061010576.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154593.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..549
                     /product="folylpolyglutamate synthase, mitochondrial
                     isoform X2"
                     /calculated_mol_wt=60816
     Region          6..543
                     /region_name="PLN02881"
                     /note="tetrahydrofolylpolyglutamate synthase; cl47075"
                     /db_xref="CDD:481415"
     CDS             1..549
                     /gene="FPGS"
                     /coded_by="XM_061154593.1:114..1763"
                     /db_xref="GeneID:133064454"
ORIGIN      
        1 mkaeayqdav rtlntlqtna nylemvkrer gdpqtqleam klylarsglq vedldqlnii
       61 hitgtkgkgs tcafterilr syglktgffs sphlvqvrer iringqpiss elftkhfwrl
      121 yhrleetkdd sscvsmpgyf rfltlmafhv flqekvdlav vevgiggayd ctniirkpvv
      181 cgitslgidh tgllgdtmek iawqkggifk sgvpaftvpq pdeplavlrd raqqiscply
      241 lcpplqalee ggppltlgle gehqrsnaal alqlarcwlq qkgyqdagel kasrpslpgq
      301 lplapvfqpt phmqqglwht ewpgrtqllr rgpltwyldg ahttssmqac vrwfrqalhr
      361 cqrpdsgsev rvllfnstgd rdsaallkll qpcqfdyaif cpnlaemast dnadqqnftv
      421 tldqvllrcl thqqhwsrlh eeqaspdpws tpsreqggpa slllaphpph thsasslifs
      481 cishalqwit qgrdpvfqpp rpprgllahp vadsgavvlq eaaavhvlvt gslhlvggvl
      541 kllepslsq
//
LOCUS       XP_061010577             372 aa            linear   MAM 02-DEC-2023
DEFINITION  cyclin-dependent kinase 9 [Dama dama].
ACCESSION   XP_061010577
VERSION     XP_061010577.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154594.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..372
                     /product="cyclin-dependent kinase 9"
                     /calculated_mol_wt=42617
     Region          6..315
                     /region_name="STKc_CDK9"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Cyclin-Dependent protein Kinase 9; cd07865"
                     /db_xref="CDD:270848"
     Site            order(8..13,57..59,61,64,68,71,81..84,86,99)
                     /site_type="other"
                     /note="CDK/cyclin interface [polypeptide binding]"
                     /db_xref="CDD:270848"
     Site            order(25..28,33,46,48,65,79,103..106,109,111..112,149,151,
                     153..154,156,167,170,186,188..191,193,231..232)
                     /site_type="active"
                     /db_xref="CDD:270848"
     Site            order(25..28,33,46,48,79,103..106,109,112,153..154,156,
                     167)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270848"
     Site            order(65,111,149,151,170,186,188..191,193,231..232)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270848"
     Site            order(166..180,183..193)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270848"
     CDS             1..372
                     /gene="CDK9"
                     /coded_by="XM_061154594.1:69..1187"
                     /db_xref="GeneID:133064455"
ORIGIN      
        1 makqydsvec pfcdevtkye klakigqgtf gevfkakhrk tgqkvalkkv lmenekegfp
       61 italreikil qllkhenvvn lieicrtkas pynrckgsiy lvfdfcehdl agllsnvlvk
      121 ftlseikrvm qmllnglyyi hrnkilhrdm kaanvlitrd gvlkladfgl arafslakns
      181 qpnrytnrvv tlwyrppell lgerdygppi dlwgagcima emwtrspimq gnteqhqlal
      241 isqlcgsitp evwpnvdkye lfekvelvkg qkrkvkdrlk ayvrdpyald lidkllvldp
      301 aqridsddal nhdffwsdpm psdlkgmlst hltsmfeyla pprrkgsqit qqstnqsrnp
      361 attnqtefer vf
//
LOCUS       XP_061010578             860 aa            linear   MAM 02-DEC-2023
DEFINITION  SH2 domain-containing protein 3C isoform X1 [Dama dama].
ACCESSION   XP_061010578
VERSION     XP_061010578.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154595.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..860
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..860
                     /product="SH2 domain-containing protein 3C isoform X1"
                     /calculated_mol_wt=94347
     Region          <102..>177
                     /region_name="PRK11633"
                     /note="cell division protein DedD; Provisional"
                     /db_xref="CDD:236940"
     Region          213..347
                     /region_name="SH2_BCAR3"
                     /note="Src homology 2 (SH2) domain in the Breast Cancer
                     Anti-estrogen Resistance protein 3; cd10337"
                     /db_xref="CDD:198200"
     Site            order(227,243,264,266)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198200"
     Site            order(265,300)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198200"
     Region          585..>762
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases. Small GTP-binding proteins of the Ras
                     superfamily function as molecular switches in fundamental
                     events such as signal transduction, cytoskeleton dynamics
                     and intracellular trafficking; cl02485"
                     /db_xref="CDD:470590"
     Site            order(619..621,633..634,636..638,640..641,644..645,648,
                     683,686..687,689..691,693..696,698..699,716,719,722..723,
                     726,745..747,750..752,754,758..759,761..762)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     CDS             1..860
                     /gene="SH2D3C"
                     /coded_by="XM_061154595.1:136..2718"
                     /db_xref="GeneID:133064456"
ORIGIN      
        1 mtegtkkask kfkffkfkgf gslsnlprsf tlrrsmapns irpqveadtf datqddmvtv
       61 pksppayars sdmyshmgtm prpsikkaqg kqptqkaqkv gpepqvvprs lpeppvleaa
      121 ekvmvetaas redtpavgtn psvvevdptr kpedarpdte eeqdpknvps erataepeag
      181 gdyvkfskek yildsspekl hkeleeelkl sstdlrshaw yhgriprevs etlvqrngdf
      241 lirdsltslg dyvltcrwrn qalhfkinkv vvkagesyth iqylfeqesf dhvpalvryh
      301 vgsrkavseq sgaiiycpvn rtfplrylea cyglgqgggk aaspaspsgp kgshmkrrsv
      361 tmtdgltadk vtrsdgcpts tsvphpresi rncalsmdqi qdlhspmspi sespsspays
      421 tvtrvhaapa apsatalpas pvtrrssepq lcpgsapkph gesdkgpyss pshtlckasp
      481 spslssysdp dsghycqlqp pargsrewaa aeassrqars ygeklkelse ngapegdwgr
      541 tftvpvveat ssfnpatfrs llipkdnrpl evgllrkvke llaevdartl arhvtkvdcl
      601 varilgvtke mqtlmgvrwg melltlphgr qlrldllerf htmsimlavd ilgctgsaee
      661 raallhktiq laaelrgtmg nmfsfaavmg aldmaqiarl eqtwvtlrqr htegailyek
      721 tlkpflksln egkegpplsn ttfphilpli tllecdsapa egpepwgste hgvevvlahl
      781 eaartvahhg glyhtnaevk lqgfqarpel levfstefqm rllwgsqgac ssqarryekf
      841 dkvltalshk lepavrssel
//
LOCUS       XP_061010579             703 aa            linear   MAM 02-DEC-2023
DEFINITION  SH2 domain-containing protein 3C isoform X2 [Dama dama].
ACCESSION   XP_061010579
VERSION     XP_061010579.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154596.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..703
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..703
                     /product="SH2 domain-containing protein 3C isoform X2"
                     /calculated_mol_wt=76908
     Region          56..190
                     /region_name="SH2_BCAR3"
                     /note="Src homology 2 (SH2) domain in the Breast Cancer
                     Anti-estrogen Resistance protein 3; cd10337"
                     /db_xref="CDD:198200"
     Site            order(70,86,107,109)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198200"
     Site            order(108,143)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198200"
     Region          428..>605
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases. Small GTP-binding proteins of the Ras
                     superfamily function as molecular switches in fundamental
                     events such as signal transduction, cytoskeleton dynamics
                     and intracellular trafficking; cl02485"
                     /db_xref="CDD:470590"
     Site            order(462..464,476..477,479..481,483..484,487..488,491,
                     526,529..530,532..534,536..539,541..542,559,562,565..566,
                     569,588..590,593..595,597,601..602,604..605)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     CDS             1..703
                     /gene="SH2D3C"
                     /coded_by="XM_061154596.1:56..2167"
                     /db_xref="GeneID:133064456"
ORIGIN      
        1 mtavgrrcpa lgsrgataep eaggdyvkfs kekyildssp eklhkeleee lklsstdlrs
       61 hawyhgripr evsetlvqrn gdflirdslt slgdyvltcr wrnqalhfki nkvvvkages
      121 ythiqylfeq esfdhvpalv ryhvgsrkav seqsgaiiyc pvnrtfplry leacyglgqg
      181 ggkaaspasp sgpkgshmkr rsvtmtdglt adkvtrsdgc ptstsvphpr esirncalsm
      241 dqiqdlhspm spisespssp aystvtrvha apaapsatal paspvtrrss epqlcpgsap
      301 kphgesdkgp ysspshtlck aspspslssy sdpdsghycq lqppargsre waaaeassrq
      361 arsygeklke lsengapegd wgrtftvpvv eatssfnpat frsllipkdn rplevgllrk
      421 vkellaevda rtlarhvtkv dclvarilgv tkemqtlmgv rwgmelltlp hgrqlrldll
      481 erfhtmsiml avdilgctgs aeeraallhk tiqlaaelrg tmgnmfsfaa vmgaldmaqi
      541 arleqtwvtl rqrhtegail yektlkpflk slnegkegpp lsnttfphil plitllecds
      601 apaegpepwg stehgvevvl ahleaartva hhgglyhtna evklqgfqar pellevfste
      661 fqmrllwgsq gacssqarry ekfdkvltal shklepavrs sel
//
LOCUS       XP_061010580             702 aa            linear   MAM 02-DEC-2023
DEFINITION  SH2 domain-containing protein 3C isoform X3 [Dama dama].
ACCESSION   XP_061010580
VERSION     XP_061010580.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154597.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..702
                     /product="SH2 domain-containing protein 3C isoform X3"
                     /calculated_mol_wt=77102
     Region          55..189
                     /region_name="SH2_BCAR3"
                     /note="Src homology 2 (SH2) domain in the Breast Cancer
                     Anti-estrogen Resistance protein 3; cd10337"
                     /db_xref="CDD:198200"
     Site            order(69,85,106,108)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198200"
     Site            order(107,142)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198200"
     Region          427..>604
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases. Small GTP-binding proteins of the Ras
                     superfamily function as molecular switches in fundamental
                     events such as signal transduction, cytoskeleton dynamics
                     and intracellular trafficking; cl02485"
                     /db_xref="CDD:470590"
     Site            order(461..463,475..476,478..480,482..483,486..487,490,
                     525,528..529,531..533,535..538,540..541,558,561,564..565,
                     568,587..589,592..594,596,600..601,603..604)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     CDS             1..702
                     /gene="SH2D3C"
                     /coded_by="XM_061154597.1:40..2148"
                     /db_xref="GeneID:133064456"
ORIGIN      
        1 mtercslwsa lsaaaccfyr gsfvqvqfsk ekyildsspe klhkeleeel klsstdlrsh
       61 awyhgripre vsetlvqrng dflirdslts lgdyvltcrw rnqalhfkin kvvvkagesy
      121 thiqylfeqe sfdhvpalvr yhvgsrkavs eqsgaiiycp vnrtfplryl eacyglgqgg
      181 gkaaspasps gpkgshmkrr svtmtdglta dkvtrsdgcp tstsvphpre sirncalsmd
      241 qiqdlhspms pisespsspa ystvtrvhaa paapsatalp aspvtrrsse pqlcpgsapk
      301 phgesdkgpy sspshtlcka spspslssys dpdsghycql qppargsrew aaaeassrqa
      361 rsygeklkel sengapegdw grtftvpvve atssfnpatf rsllipkdnr plevgllrkv
      421 kellaevdar tlarhvtkvd clvarilgvt kemqtlmgvr wgmelltlph grqlrldlle
      481 rfhtmsimla vdilgctgsa eeraallhkt iqlaaelrgt mgnmfsfaav mgaldmaqia
      541 rleqtwvtlr qrhtegaily ektlkpflks lnegkegppl snttfphilp litllecdsa
      601 paegpepwgs tehgvevvla hleaartvah hgglyhtnae vklqgfqarp ellevfstef
      661 qmrllwgsqg acssqarrye kfdkvltals hklepavrss el
//
LOCUS       XP_061010581             522 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: cilia- and flagella-associated protein 157
            [Dama dama].
ACCESSION   XP_061010581
VERSION     XP_061010581.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154598.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..522
                     /product="LOW QUALITY PROTEIN: cilia- and
                     flagella-associated protein 157"
                     /calculated_mol_wt=60354
     Region          49..>400
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..522
                     /gene="CFAP157"
                     /coded_by="XM_061154598.1:1..1569"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /db_xref="GeneID:133064457"
ORIGIN      
        1 mapkkkgake pelkkkkggk kdpnlankpm empiseenre fyhiqirnle drlaryqrkw
       61 delamqeklf rqefeqlann kkeivaflkr tlnqrvdeit dlneqlqslq lakemekdaf
      121 eaqlaqvrhe fqetkdqltt eniilggkla aleefrlqke elmqkfmsle dqlrkqeney
      181 kdyvhnlekk svldkdrlrk eiiqrvnmva tefrkvatsq mwdttkrait ennavtlqla
      241 kitrqgtqll aeneqlrghq ddlckqlell ensqklmarn nrgrqkvilm ltekcreqqq
      301 gtaeakrlrv llgqleqdll kqqqdnqalr kerdqlnlql erqqaegqrl qqqltkeqea
      361 rvsletalaq atsflqdivq mrpneedgdf dvvfqlqrke mlqqlllmlg savvlspqma
      421 ealhregqpc glpregxvst qllktgsllq qlsgitpyrp gdlglvprri hippnpedlr
      481 llshttrmgn lqaysspevr vpgaqkklrk klslpevsll sk
//
LOCUS       XP_061010583             248 aa            linear   MAM 02-DEC-2023
DEFINITION  peptidyl-tRNA hydrolase isoform X1 [Dama dama].
ACCESSION   XP_061010583
VERSION     XP_061010583.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154600.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..248
                     /product="peptidyl-tRNA hydrolase isoform X1"
                     /calculated_mol_wt=26429
     Region          32..237
                     /region_name="PTH"
                     /note="Peptidyl-tRNA hydrolase (PTH) is a monomeric
                     protein that cleaves the ester bond linking the nascent
                     peptide and tRNA when peptidyl-tRNA is released
                     prematurely from the ribosome. This ensures the recycling
                     of peptidyl-tRNAs into tRNAs produced through...; cd00462"
                     /db_xref="CDD:238259"
     Site            order(38,46,94..95,121,141)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238259"
     Site            46
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:238259"
     CDS             1..248
                     /gene="PTRH1"
                     /coded_by="XM_061154600.1:29..775"
                     /db_xref="GeneID:133064458"
ORIGIN      
        1 mgplglsrag lwlsramsrc vleprlagkr wlvaglgnpg lpgtrhsvgm avlghlarrl
       61 gvaeswvrdr rcaadlalas lgdaqlvllr prrlmnlngh svaraaelfg ltaeevylvh
      121 deldkplgkv alklggsarg hngvrscmsc lnssvslrlh palsrvagtg pptllltrap
      181 waplappqam prlrvgigrp thqdavqayv lgrfspaeqe llppvleraa dllldhirqr
      241 sqesssgp
//
LOCUS       XP_061010584             214 aa            linear   MAM 02-DEC-2023
DEFINITION  peptidyl-tRNA hydrolase isoform X2 [Dama dama].
ACCESSION   XP_061010584
VERSION     XP_061010584.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154601.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..214
                     /product="peptidyl-tRNA hydrolase isoform X2"
                     /calculated_mol_wt=22892
     Region          32..203
                     /region_name="PTH"
                     /note="Peptidyl-tRNA hydrolase (PTH) is a monomeric
                     protein that cleaves the ester bond linking the nascent
                     peptide and tRNA when peptidyl-tRNA is released
                     prematurely from the ribosome. This ensures the recycling
                     of peptidyl-tRNAs into tRNAs produced through...; cd00462"
                     /db_xref="CDD:238259"
     Site            order(38,46,94..95,121,141)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238259"
     Site            46
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:238259"
     CDS             1..214
                     /gene="PTRH1"
                     /coded_by="XM_061154601.1:29..673"
                     /db_xref="GeneID:133064458"
ORIGIN      
        1 mgplglsrag lwlsramsrc vleprlagkr wlvaglgnpg lpgtrhsvgm avlghlarrl
       61 gvaeswvrdr rcaadlalas lgdaqlvllr prrlmnlngh svaraaelfg ltaeevylvh
      121 deldkplgkv alklggsarg hngvrscmsc lnssamprlr vgigrpthqd avqayvlgrf
      181 spaeqellpp vleraadlll dhirqrsqes ssgp
//
LOCUS       XP_061010585             594 aa            linear   MAM 02-DEC-2023
DEFINITION  syntaxin-binding protein 1 [Dama dama].
ACCESSION   XP_061010585
VERSION     XP_061010585.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154602.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..594
                     /product="syntaxin-binding protein 1"
                     /calculated_mol_wt=67438
     Region          29..580
                     /region_name="Sec1"
                     /note="Sec1 family; pfam00995"
                     /db_xref="CDD:460020"
     CDS             1..594
                     /gene="STXBP1"
                     /coded_by="XM_061154602.1:118..1902"
                     /db_xref="GeneID:133064459"
ORIGIN      
        1 mapiglkavv gekimhdvik kvkkkgewkv lvvdqlsmrm lsscckmtdi mtegitived
       61 inkrreplps leavylitps eksvhslisd fkdpptakyr aahvfftdsc pdalfnelvk
      121 sraakviktl teiniaflpy esqvysldsa dsfqsfysph kaqmknpile rlaeqiatlc
      181 atlkeypavr yrgeykdnal laqliqdkld aykaddptmg egpdkarsql lildrgfdps
      241 spvlheltfq amsydllpie ndvykyetsg igearvkevl ldedddlwia lrhkhiaevs
      301 qevtrslkdf ssskrmntge kttmrdlsqm lkkmpqyqke lskysthlhl aedcmkhyqg
      361 tvdklcrveq dlamgtdaeg ekikdpmrai vpilldanvs tydkiriill yiflkngite
      421 enlnkliqha qippedseii tnmahlgvpi vtdstlrrrs kperkerise qtyqlsrwtp
      481 iikdimedti edkldtkhyp yistrssasf sttavsaryg hwhknkapge yrsgprliif
      541 ilggvslnem rcayevtqan gkwevligst hiltpqklld tlkklnktde eiss
//
LOCUS       XP_061010586             724 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase LRSAM1 isoform X1 [Dama dama].
ACCESSION   XP_061010586
VERSION     XP_061010586.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154603.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..724
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..724
                     /product="E3 ubiquitin-protein ligase LRSAM1 isoform X1"
                     /calculated_mol_wt=83625
     Region          <33..>181
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          33..54
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          55..79
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          80..105
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          106..128
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          129..151
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          152..174
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <268..>688
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          567..631
                     /region_name="SAM_superfamily"
                     /note="SAM (Sterile alpha motif); cl15755"
                     /db_xref="CDD:472832"
     Region          673..720
                     /region_name="RING-HC_LRSAM1"
                     /note="RING finger, HC subclass, found in leucine-rich
                     repeat and sterile alpha motif-containing protein 1
                     (LRSAM1) and similar proteins; cd16515"
                     /db_xref="CDD:438178"
     CDS             1..724
                     /gene="LRSAM1"
                     /coded_by="XM_061154603.1:401..2575"
                     /db_xref="GeneID:133064461"
ORIGIN      
        1 mplffrkrkp seearkrley qmclakeaga ddildiskce lseipfgafa tckvlqkkvl
       61 ivhtnlltsl lpkscsllsl atikvldlhd nqltalpedt gqltalqvln vernqltylp
      121 rsignliqlq tlnvkdnrlk elpdtlgelr slrtldisen eiqrlprmla hvrtletlsl
      181 dalsmvyppq evcstgteai qqflckesgl eyyppsqyll pvleqdgaen aldspdgprd
      241 rlcreeaewq nrfsdyekrk eqkmleklef errlelgqre haqllqqsns qkdeilqtvk
      301 eeqsrleqgl sehqrfldae rqrlqeqlkq teqsissriq kllqenrrqk ksseilksle
      361 nerirmerlm sitqeeaesl rrreiasamq qmltescksr lvqmayesqr qnlvqqacss
      421 madmderfqq ilswqqmdqn kaisqilqes amqkaafeal qvkkdlmhrq irkqikliet
      481 ellqltqlel krksldteal qemiseqrwa lssllqqllk ektqreeelr eilteleaqs
      541 etkqenywli qyqrllnqkp lslklqeegl erplvallve lsaehylpif ahhrlslaml
      601 srmgpadlak vgvseaglqh eilrraqell daartqpell kapegrilpt apeelpeavr
      661 psappaelle vqtsecvvcl ereaqmifln cghvcccqqc cqplricplc rqdiaqrlri
      721 yhss
//
LOCUS       XP_061010587             724 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase LRSAM1 isoform X1 [Dama dama].
ACCESSION   XP_061010587
VERSION     XP_061010587.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154604.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..724
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..724
                     /product="E3 ubiquitin-protein ligase LRSAM1 isoform X1"
                     /calculated_mol_wt=83625
     Region          <33..>181
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          33..54
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          55..79
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          80..105
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          106..128
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          129..151
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          152..174
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <268..>688
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          567..631
                     /region_name="SAM_superfamily"
                     /note="SAM (Sterile alpha motif); cl15755"
                     /db_xref="CDD:472832"
     Region          673..720
                     /region_name="RING-HC_LRSAM1"
                     /note="RING finger, HC subclass, found in leucine-rich
                     repeat and sterile alpha motif-containing protein 1
                     (LRSAM1) and similar proteins; cd16515"
                     /db_xref="CDD:438178"
     CDS             1..724
                     /gene="LRSAM1"
                     /coded_by="XM_061154604.1:235..2409"
                     /db_xref="GeneID:133064461"
ORIGIN      
        1 mplffrkrkp seearkrley qmclakeaga ddildiskce lseipfgafa tckvlqkkvl
       61 ivhtnlltsl lpkscsllsl atikvldlhd nqltalpedt gqltalqvln vernqltylp
      121 rsignliqlq tlnvkdnrlk elpdtlgelr slrtldisen eiqrlprmla hvrtletlsl
      181 dalsmvyppq evcstgteai qqflckesgl eyyppsqyll pvleqdgaen aldspdgprd
      241 rlcreeaewq nrfsdyekrk eqkmleklef errlelgqre haqllqqsns qkdeilqtvk
      301 eeqsrleqgl sehqrfldae rqrlqeqlkq teqsissriq kllqenrrqk ksseilksle
      361 nerirmerlm sitqeeaesl rrreiasamq qmltescksr lvqmayesqr qnlvqqacss
      421 madmderfqq ilswqqmdqn kaisqilqes amqkaafeal qvkkdlmhrq irkqikliet
      481 ellqltqlel krksldteal qemiseqrwa lssllqqllk ektqreeelr eilteleaqs
      541 etkqenywli qyqrllnqkp lslklqeegl erplvallve lsaehylpif ahhrlslaml
      601 srmgpadlak vgvseaglqh eilrraqell daartqpell kapegrilpt apeelpeavr
      661 psappaelle vqtsecvvcl ereaqmifln cghvcccqqc cqplricplc rqdiaqrlri
      721 yhss
//
LOCUS       XP_061010588             691 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase LRSAM1 isoform X2 [Dama dama].
ACCESSION   XP_061010588
VERSION     XP_061010588.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154605.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..691
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..691
                     /product="E3 ubiquitin-protein ligase LRSAM1 isoform X2"
                     /calculated_mol_wt=79608
     Region          <33..>181
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          33..54
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          55..79
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          80..105
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          106..128
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          129..151
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          152..174
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <239..>509
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          539..598
                     /region_name="SAM_superfamily"
                     /note="SAM (Sterile alpha motif); cl15755"
                     /db_xref="CDD:472832"
     Region          640..687
                     /region_name="RING-HC_LRSAM1"
                     /note="RING finger, HC subclass, found in leucine-rich
                     repeat and sterile alpha motif-containing protein 1
                     (LRSAM1) and similar proteins; cd16515"
                     /db_xref="CDD:438178"
     CDS             1..691
                     /gene="LRSAM1"
                     /coded_by="XM_061154605.1:401..2476"
                     /db_xref="GeneID:133064461"
ORIGIN      
        1 mplffrkrkp seearkrley qmclakeaga ddildiskce lseipfgafa tckvlqkkvl
       61 ivhtnlltsl lpkscsllsl atikvldlhd nqltalpedt gqltalqvln vernqltylp
      121 rsignliqlq tlnvkdnrlk elpdtlgelr slrtldisen eiqrlprmla hvrtletlsl
      181 dalsmvyppq evcstgteai qqflckesgl eyyppsqyll pvleqdgaen aldspdgprd
      241 rlcreeaewq nrfsdyekrk eqkmleklef errlelgqre haqllqqsns qkdeilqtvk
      301 eeqsrleqgl sehqrfldae rqrlqeqlkq teqsissriq kllqenrrqk ksseilksle
      361 nerirmerlm sitqeeaesl rrreiasamq qmltescksr lvqmayesqr qnlvqqacss
      421 madmderfqq ilswqqmdqn kaisqilqes amqkaafeal qvkkdlmhrq irkqikliet
      481 ellqltqlel krksldteal qemiseqrwa lssllqqllk ektqreeelr eileeglerp
      541 lvallvelsa ehylpifahh rlslamlsrm gpadlakvgv seaglqheil rraqelldaa
      601 rtqpellkap egrilptape elpeavrpsa ppaellevqt secvvclere aqmiflncgh
      661 vcccqqccqp lricplcrqd iaqrlriyhs s
//
LOCUS       XP_061010589             461 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase LRSAM1 isoform X3 [Dama dama].
ACCESSION   XP_061010589
VERSION     XP_061010589.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154606.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..461
                     /product="E3 ubiquitin-protein ligase LRSAM1 isoform X3"
                     /calculated_mol_wt=53685
     Region          <33..>425
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          304..368
                     /region_name="SAM_superfamily"
                     /note="SAM (Sterile alpha motif); cl15755"
                     /db_xref="CDD:472832"
     Region          410..457
                     /region_name="RING-HC_LRSAM1"
                     /note="RING finger, HC subclass, found in leucine-rich
                     repeat and sterile alpha motif-containing protein 1
                     (LRSAM1) and similar proteins; cd16515"
                     /db_xref="CDD:438178"
     CDS             1..461
                     /gene="LRSAM1"
                     /coded_by="XM_061154606.1:136..1521"
                     /db_xref="GeneID:133064461"
ORIGIN      
        1 mlekleferr lelgqrehaq llqqsnsqkd eilqtvkeeq srleqglseh qrfldaerqr
       61 lqeqlkqteq sissriqkll qenrrqkkss eilkslener irmerlmsit qeeaeslrrr
      121 eiasamqqml tescksrlvq mayesqrqnl vqqacssmad mderfqqils wqqmdqnkai
      181 sqilqesamq kaafealqvk kdlmhrqirk qiklietell qltqlelkrk sldtealqem
      241 iseqrwalss llqqllkekt qreeelreil teleaqsetk qenywliqyq rllnqkplsl
      301 klqeeglerp lvallvelsa ehylpifahh rlslamlsrm gpadlakvgv seaglqheil
      361 rraqelldaa rtqpellkap egrilptape elpeavrpsa ppaellevqt secvvclere
      421 aqmiflncgh vcccqqccqp lricplcrqd iaqrlriyhs s
//
LOCUS       XP_061010590             744 aa            linear   MAM 02-DEC-2023
DEFINITION  protein Niban 2 [Dama dama].
ACCESSION   XP_061010590
VERSION     XP_061010590.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154607.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..744
                     /product="protein Niban 2"
                     /calculated_mol_wt=83893
     Region          9..557
                     /region_name="Niban-like"
                     /note="Niban-like protein; cd23949"
                     /db_xref="CDD:469558"
     CDS             1..744
                     /gene="NIBAN2"
                     /coded_by="XM_061154607.1:194..2428"
                     /db_xref="GeneID:133064462"
ORIGIN      
        1 mgdvlsthld darrqhiaek tgkilteflr fyedqygval fnsmrheieg tglpqaqllw
       61 rkvpleerii fsgnlfqyqe dnkkwrnrfs lvphnyglvl yenkvayerq ippravinsa
      121 gykiltsldq ylelvgnslp gttpksgsap ilkcptqfpl ilwhpsarhy yfcmmteaeq
      181 dkwqavlqdc vrhcnngipe dskvegpaft dairmyrqsk elygtwemlc gnevqilsnl
      241 vmeelgpelk aelvprlkgk pqerqrqwiq isdavyrmvy eqakarfeav lsklqlarpa
      301 meavirtdmd qiitskehla skirasilpk aevcvrnhvq pyipsileal mvptsqgfte
      361 vrdvffkevt dmnlnvineg gidklgeyme klsqlayhpl kmhscyekme plrldglqqr
      421 fdvssmsvfk qraqihmreq mdnavytfet llhqelgkgp tkeelcksiq rilervlkky
      481 dydsstvrkr ffreallqit ipfllkklap tckselsrfq elifedfarf ilventyeev
      541 vlqtvmkdil qavkeaavqr khnlyrdsvv mhnsdpnlhl laegapidwg eeygdggggg
      601 dpgiqqaapl sekrrrakqv vsvvqdedag lpfeaapepp spsspdgvte lrgllagdlr
      661 aespllagpl lngapvqesp qpglapeats ppasplrqlp seklvglepp kpsdqetgeq
      721 vsgpggcppi htttedsagv qtef
//
LOCUS       XP_061010591             497 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 79 isoform X1 [Dama dama].
ACCESSION   XP_061010591
VERSION     XP_061010591.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154608.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..497
                     /product="zinc finger protein 79 isoform X1"
                     /calculated_mol_wt=55650
     Region          38..96
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          192..214
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          194..214
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(199,201,203,205..206,209..210,213,227,229,233..234,
                     237..238,241,255,257,259,261..262,265..266,269)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          <205..436
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          222..242
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(222,225,238,242)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          250..270
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          278..298
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          306..326
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          334..354
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(339,341,343,345..346,349..350,353,367,369,373..374,
                     377..378,381,395,397,399,401..402,405..406,409)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          362..382
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(362,365,378,382)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          390..410
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          418..438
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(418,421,434,438)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          430..455
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          446..466
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          458..483
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          474..494
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..497
                     /gene="ZNF79"
                     /coded_by="XM_061154608.1:3164..4657"
                     /db_xref="GeneID:133064463"
ORIGIN      
        1 mlegeppspd palpqeedte eegmaaglta gpqgstpfss ltvdftqggw rqlapaprdr
       61 feegmpeksr nlvllglpvs qpgmnfqleq regswmlkrd glrnacpdwk iisesppeqd
      121 iseesfqdps vempsgeseh rnselgksln lrpflspqqr vptevrsrtw dthaesfgkn
      181 agtvkahrvk pytcnecgka fsycsslsqh qkshtgekpy ecnecgkafs qsssliqhqr
      241 ihtgekpykc secgrafsqn anltkhqrth tgekpykcte cekafsdcsa lvqhqrihtg
      301 ekpyecsdcg kafrhsanlt nhqrthtgek pykcsnceka fsycaafiqh qrihtgekpy
      361 kcnacgkafs qsanltnhqr ihtgekpykc secgkafsqs tnliihqkth tgekpykcnd
      421 cgkffsessa lirhhiihtg ekpyecnecg kafnqsssls qhqrihtgvk pyecrecgka
      481 frcssafirh qrlhage
//
LOCUS       XP_061010592             414 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 79 isoform X2 [Dama dama].
ACCESSION   XP_061010592
VERSION     XP_061010592.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154609.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..414
                     /product="zinc finger protein 79 isoform X2"
                     /calculated_mol_wt=46864
     Region          111..131
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(111,114,127,131)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Site            order(116,118,120,122..123,126..127,130,144,146,150..151,
                     154..155,158,172,174,176,178..179,182..183,186)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          <122..353
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          139..159
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          167..187
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          195..215
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          223..243
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          251..271
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(251,254,267,271)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Site            order(256,258,260,262..263,266..267,270,284,286,290..291,
                     294..295,298,312,314,316,318..319,322..323,326)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          279..299
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          307..327
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          335..355
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          347..372
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          363..383
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          375..400
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          391..411
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..414
                     /gene="ZNF79"
                     /coded_by="XM_061154609.1:494..1738"
                     /db_xref="GeneID:133064463"
ORIGIN      
        1 mnfqleqreg swmlkrdglr nacpdwkiis esppeqdise esfqdpsvem psgesehrns
       61 elgkslnlrp flspqqrvpt evrsrtwdth aesfgknagt vkahrvkpyt cnecgkafsy
      121 csslsqhqks htgekpyecn ecgkafsqss sliqhqriht gekpykcsec grafsqnanl
      181 tkhqrthtge kpykctecek afsdcsalvq hqrihtgekp yecsdcgkaf rhsanltnhq
      241 rthtgekpyk csncekafsy caafiqhqri htgekpykcn acgkafsqsa nltnhqriht
      301 gekpykcsec gkafsqstnl iihqkthtge kpykcndcgk ffsessalir hhiihtgekp
      361 yecnecgkaf nqssslsqhq rihtgvkpye crecgkafrc ssafirhqrl hage
//
LOCUS       XP_061010593             478 aa            linear   MAM 02-DEC-2023
DEFINITION  solute carrier family 2, facilitated glucose transporter member 8
            isoform X1 [Dama dama].
ACCESSION   XP_061010593
VERSION     XP_061010593.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154610.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..478
                     /product="solute carrier family 2, facilitated glucose
                     transporter member 8 isoform X1"
                     /calculated_mol_wt=51212
     Region          36..470
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(40..41,44..45,48,84,134..135,137..139,142,162,
                     165..166,169,265,268..269,272..274,277,303,307,386..387,
                     391,395,411,414..415,418..419,422)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340991"
     CDS             1..478
                     /gene="SLC2A8"
                     /coded_by="XM_061154610.1:115..1551"
                     /db_xref="GeneID:133064464"
ORIGIN      
        1 mtpedqeetq pllgplggsa prgrrvflaa faaalgplsf gfalgysspa ipslrraapp
       61 aphldedaas wfgaivtlga aaggvlggwl vdragrklsl llcsmpfvtg ftvitaaqnl
      121 wvllggrllt glacgiaslv apvyiseiay pevrgllgsc vqlmvvtgil laylagwvle
      181 wrwlavlgcv ppsfmlllmc fmpetprfll sqhkrqeama amqflwgsaq gweeppigae
      241 hqgfhmaqlw rpgvykpfii gislmafqql sginavmfya etifeeakfk dsslasvvvg
      301 liqvlftata alimdragrr llltlsgvvm afstsafgay fklteggpsn sshvdlpahl
      361 smgptdtntg lawlavgsmc lfiagfavgw gpipwllmse ifplpvkgva tgvcvltnwf
      421 maflvtkefn slmevlrpyg afwlasafsf fgvlftlacv petkgktleq itahfegr
//
LOCUS       XP_061010594             465 aa            linear   MAM 02-DEC-2023
DEFINITION  solute carrier family 2, facilitated glucose transporter member 8
            isoform X2 [Dama dama].
ACCESSION   XP_061010594
VERSION     XP_061010594.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154611.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..465
                     /product="solute carrier family 2, facilitated glucose
                     transporter member 8 isoform X2"
                     /calculated_mol_wt=49942
     Region          36..457
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(40..41,44..45,48,84,134..135,137..139,142,162,
                     165..166,169,265,268..269,272..274,277,294,373..374,378,
                     382,398,401..402,405..406,409)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340991"
     CDS             1..465
                     /gene="SLC2A8"
                     /coded_by="XM_061154611.1:116..1513"
                     /db_xref="GeneID:133064464"
ORIGIN      
        1 mtpedqeetq pllgplggsa prgrrvflaa faaalgplsf gfalgysspa ipslrraapp
       61 aphldedaas wfgaivtlga aaggvlggwl vdragrklsl llcsmpfvtg ftvitaaqnl
      121 wvllggrllt glacgiaslv apvyiseiay pevrgllgsc vqlmvvtgil laylagwvle
      181 wrwlavlgcv ppsfmlllmc fmpetprfll sqhkrqeama amqflwgsaq gweeppigae
      241 hqgfhmaqlw rpgvykpfii gislmafqql sginavmfya etifeeakfk vlftataali
      301 mdragrrlll tlsgvvmafs tsafgayfkl teggpsnssh vdlpahlsmg ptdtntglaw
      361 lavgsmclfi agfavgwgpi pwllmseifp lpvkgvatgv cvltnwfmaf lvtkefnslm
      421 evlrpygafw lasafsffgv lftlacvpet kgktleqita hfegr
//
LOCUS       XP_061010595             401 aa            linear   MAM 02-DEC-2023
DEFINITION  solute carrier family 2, facilitated glucose transporter member 8
            isoform X3 [Dama dama].
ACCESSION   XP_061010595
VERSION     XP_061010595.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154612.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..401
                     /product="solute carrier family 2, facilitated glucose
                     transporter member 8 isoform X3"
                     /calculated_mol_wt=42534
     Region          36..395
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(40..41,44..45,48,84,134..135,137..139,142,162,
                     165..166,169,265,268..269,272..274,277,303,307,386,390,
                     394)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340991"
     CDS             1..401
                     /gene="SLC2A8"
                     /coded_by="XM_061154612.1:118..1323"
                     /db_xref="GeneID:133064464"
ORIGIN      
        1 mtpedqeetq pllgplggsa prgrrvflaa faaalgplsf gfalgysspa ipslrraapp
       61 aphldedaas wfgaivtlga aaggvlggwl vdragrklsl llcsmpfvtg ftvitaaqnl
      121 wvllggrllt glacgiaslv apvyiseiay pevrgllgsc vqlmvvtgil laylagwvle
      181 wrwlavlgcv ppsfmlllmc fmpetprfll sqhkrqeama amqflwgsaq gweeppigae
      241 hqgfhmaqlw rpgvykpfii gislmafqql sginavmfya etifeeakfk dsslasvvvg
      301 liqvlftata alimdragrr llltlsgvvm afstsafgay fklteggpsn sshvdlpahl
      361 smgptdtntg lawlavgsmc lfiagalrag pvpalfyrak a
//
LOCUS       XP_061010596             374 aa            linear   MAM 02-DEC-2023
DEFINITION  solute carrier family 2, facilitated glucose transporter member 8
            isoform X4 [Dama dama].
ACCESSION   XP_061010596
VERSION     XP_061010596.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154613.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..374
                     /product="solute carrier family 2, facilitated glucose
                     transporter member 8 isoform X4"
                     /calculated_mol_wt=40631
     Region          1..366
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(30..31,33..35,38,58,61..62,65,161,164..165,168..170,
                     173,199,203,282..283,287,291,307,310..311,314..315,318)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340991"
     CDS             1..374
                     /gene="SLC2A8"
                     /coded_by="XM_061154613.1:227..1351"
                     /db_xref="GeneID:133064464"
ORIGIN      
        1 mpfvtgftvi taaqnlwvll ggrlltglac giaslvapvy iseiaypevr gllgscvqlm
       61 vvtgillayl agwvlewrwl avlgcvppsf mlllmcfmpe tprfllsqhk rqeamaamqf
      121 lwgsaqgwee ppigaehqgf hmaqlwrpgv ykpfiigisl mafqqlsgin avmfyaetif
      181 eeakfkdssl asvvvgliqv lftataalim dragrrlllt lsgvvmafst safgayfklt
      241 eggpsnsshv dlpahlsmgp tdtntglawl avgsmclfia gfavgwgpip wllmseifpl
      301 pvkgvatgvc vltnwfmafl vtkefnslme vlrpygafwl asafsffgvl ftlacvpetk
      361 gktleqitah fegr
//
LOCUS       XP_061010597             412 aa            linear   MAM 02-DEC-2023
DEFINITION  solute carrier family 2, facilitated glucose transporter member 8
            isoform X5 [Dama dama].
ACCESSION   XP_061010597
VERSION     XP_061010597.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154614.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..412
                     /product="solute carrier family 2, facilitated glucose
                     transporter member 8 isoform X5"
                     /calculated_mol_wt=43749
     Region          36..>385
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     CDS             1..412
                     /gene="SLC2A8"
                     /coded_by="XM_061154614.1:118..1356"
                     /db_xref="GeneID:133064464"
ORIGIN      
        1 mtpedqeetq pllgplggsa prgrrvflaa faaalgplsf gfalgysspa ipslrraapp
       61 aphldedaas wfgaivtlga aaggvlggwl vdragrklsl llcsmpfvtg ftvitaaqnl
      121 wvllggrllt glacgiaslv apvyiseiay pevrgllgsc vqlmvvtgil laylagwvle
      181 wrwlavlgcv ppsfmlllmc fmpetprfll sqhkrqeama amqflwgsaq gweeppigae
      241 hqgfhmaqlw rpgvykpfii gislmafqql sginavmfya etifeeakfk dsslasvvvg
      301 liqvlftata alimdragrr llltlsgvvm afstsafgay fklteggpsn sshvdlpahl
      361 smgptdtntg lawlavgsmc lfiaggsqtl wcllaglcll llrcpfhsgl cp
//
LOCUS       XP_061010598             228 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein uL11 [Dama dama].
ACCESSION   XP_061010598
VERSION     XP_061010598.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154615.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..228
                     /product="large ribosomal subunit protein uL11"
                     /calculated_mol_wt=24618
     Region          64..228
                     /region_name="PLN03072"
                     /note="60S ribosomal protein L12; Provisional"
                     /db_xref="CDD:178621"
     CDS             1..228
                     /gene="RPL12"
                     /coded_by="XM_061154615.1:16..702"
                     /db_xref="GeneID:133064465"
ORIGIN      
        1 maaraslegw aetavlatvv lsglypaqss hlpvfrlsar rrrrcnflrs srirvhptpa
       61 astmppkfdp neikvvylrc tggevgatsa lapkigplgl spkkvgddia katgdwkglr
      121 itvkltiqnr qaqievvpsa saliikalke pprdrkkqkn ikhsgnitfd eivniarqmr
      181 hrslarelsg tikeilgtaq svgcnvdgrh phdiiddins gavecpas
//
LOCUS       XP_061010599            1038 aa            linear   MAM 02-DEC-2023
DEFINITION  GTPase-activating Rap/Ran-GAP domain-like protein 3 isoform X1
            [Dama dama].
ACCESSION   XP_061010599
VERSION     XP_061010599.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154616.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1038
                     /product="GTPase-activating Rap/Ran-GAP domain-like
                     protein 3 isoform X1"
                     /calculated_mol_wt=115493
     Region          244..422
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     Region          521..819
                     /region_name="CNH"
                     /note="CNH domain; pfam00780"
                     /db_xref="CDD:459938"
     CDS             1..1038
                     /gene="GARNL3"
                     /coded_by="XM_061154616.1:42..3158"
                     /db_xref="GeneID:133064467"
ORIGIN      
        1 mepltkgscg sqmaqtllwk aksslsfgiq plqtwptkdp eveaqvnlsv sedlgcrrgd
       61 fsrkhygsve llissdadga iqragrfrve ngssdenata lpgtwrrtdv hlenpeyhtr
      121 wyfkyflgqv hqnyigndae kspfflsvtl sdqnnqrvpq yrailwrktg tqkiclpysp
      181 tktlsvksil samnldkfek gpreifhpei qkdllvleeq egsvnfkfgv lfakdgqltd
      241 ddmfsneigs dafqkflnll gdtitlkgwt gyrggldtkn dttgihsvyt iyqgheimfh
      301 vstmlpyske nkqqverkrh igndivtivf qegeepspaf kpsmirshft hifalvrydq
      361 qkdnyrlkif seesvplfgp plpsppvftd hqefrdfllv klingekatl etptfaqkrr
      421 rtldmlirsl yqdlmpdlhk nmlnrrsfsd vlpespksar kkeearqaef vrigqalklk
      481 sivrgdapss lvasgickke pwepqcfcsn fpheavcadp wgqallvstd agvllvdddl
      541 psvpvfdktl pvkqmhvlea ldllilradk gkdarlfvfr lsavqrgieg kqavkgkcdc
      601 renklektkg chlyainthh srelrivvai rnklllitrk hnkpsgvtgm slssplsesp
      661 veefqyirei clsdspavmt lvdgpmeesd nlicvayrhq fdvvnestge afrlhhveas
      721 rvnfvaaidv yedgeaglll cynysciykk vcpfnggsfl vqpsasdfqf cwnqapcaiv
      781 cafpyllaft tdsmeirlvv ngnlvhtavv pqlqlvasrs diyftatasa nevssggssr
      841 gasahnspqt ppgrdtpvfp sslgegeiqs knlykiplrn lvgrsierpl ksplvskvit
      901 pptsigigia aipvthslsl srmeikeias rtrrellgla ddsgprsega lkskskarkr
      961 leenqggpkp gtvrstssdr itssslesps tseanpngry qstssdpdpv aeqegspiwg
     1021 scpfqlttfs dediidlk
//
LOCUS       XP_061010600             993 aa            linear   MAM 02-DEC-2023
DEFINITION  GTPase-activating Rap/Ran-GAP domain-like protein 3 isoform X2
            [Dama dama].
ACCESSION   XP_061010600
VERSION     XP_061010600.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154617.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..993
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..993
                     /product="GTPase-activating Rap/Ran-GAP domain-like
                     protein 3 isoform X2"
                     /calculated_mol_wt=110581
     Region          199..377
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     Region          476..774
                     /region_name="CNH"
                     /note="CNH domain; pfam00780"
                     /db_xref="CDD:459938"
     CDS             1..993
                     /gene="GARNL3"
                     /coded_by="XM_061154617.1:125..3106"
                     /db_xref="GeneID:133064467"
ORIGIN      
        1 mkssvsedlg crrgdfsrkh ygsvelliss dadgaiqrag rfrvengssd enatalpgtw
       61 rrtdvhlenp eyhtrwyfky flgqvhqnyi gndaekspff lsvtlsdqnn qrvpqyrail
      121 wrktgtqkic lpysptktls vksilsamnl dkfekgprei fhpeiqkdll vleeqegsvn
      181 fkfgvlfakd gqltdddmfs neigsdafqk flnllgdtit lkgwtgyrgg ldtkndttgi
      241 hsvytiyqgh eimfhvstml pyskenkqqv erkrhigndi vtivfqegee pspafkpsmi
      301 rshfthifal vrydqqkdny rlkifseesv plfgpplpsp pvftdhqefr dfllvkling
      361 ekatletptf aqkrrrtldm lirslyqdlm pdlhknmlnr rsfsdvlpes pksarkkeea
      421 rqaefvrigq alklksivrg dapsslvasg ickkepwepq cfcsnfphea vcadpwgqal
      481 lvstdagvll vdddlpsvpv fdktlpvkqm hvlealdlli lradkgkdar lfvfrlsavq
      541 rgiegkqavk gkcdcrenkl ektkgchlya inthhsrelr ivvairnkll litrkhnkps
      601 gvtgmslssp lsespveefq yireiclsds pavmtlvdgp meesdnlicv ayrhqfdvvn
      661 estgeafrlh hveasrvnfv aaidvyedge aglllcynys ciykkvcpfn ggsflvqpsa
      721 sdfqfcwnqa pcaivcafpy llafttdsme irlvvngnlv htavvpqlql vasrsdiyft
      781 atasanevss ggssrgasah nspqtppgrd tpvfpsslge geiqsknlyk iplrnlvgrs
      841 ierplksplv skvitpptsi gigiaaipvt hslslsrmei keiasrtrre llgladdsgp
      901 rsegalksks karkrleenq ggpkpgtvrs tssdritsss lespstsean pngryqstss
      961 dpdpvaeqeg spiwgscpfq lttfsdedii dlk
//
LOCUS       XP_061010601             493 aa            linear   MAM 02-DEC-2023
DEFINITION  angiopoietin-related protein 2 [Dama dama].
ACCESSION   XP_061010601
VERSION     XP_061010601.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154618.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..493
                     /product="angiopoietin-related protein 2"
                     /calculated_mol_wt=56790
     Region          273..487
                     /region_name="FReD"
                     /note="Fibrinogen-related domains (FReDs); C terminal
                     globular domain of fibrinogen. Fibrinogen is involved in
                     blood clotting, being activated by thrombin to assemble
                     into fibrin clots. The N-termini of 2 times 3 chains come
                     together to form a globular...; cd00087"
                     /db_xref="CDD:238040"
     Site            394
                     /site_type="other"
                     /note="gamma-gamma dimer interface [polypeptide binding]"
                     /db_xref="CDD:238040"
     Site            order(422,424,426)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238040"
     Site            order(430,433..434,443..444)
                     /site_type="active"
                     /note="polymerization pocket [active]"
                     /db_xref="CDD:238040"
     CDS             1..493
                     /gene="ANGPTL2"
                     /coded_by="XM_061154618.1:498..1979"
                     /db_xref="GeneID:133064469"
ORIGIN      
        1 mrplcmtcww lgllaalgaa asqkdglegt eegspgefvy lnrykrages pdkctytfiv
       61 pqqrvtgaic vnskepevll enrvhkqele llnnellkqk rqietlqqlv evdggivsev
      121 kllrkesrnm nsrvtqlymq llheiirkrd nalelsqlen rilnqtadml qlaskykdle
      181 hkyqhlatla hnqseiiaql eehcqrvpaa rpvpqpppaa pprvyqpppy nriinqistn
      241 eiqsdqnlkv lppplptmpt ltslpsstdk psgpwrdclq aledghdtss iylvkpentn
      301 rlmqvwcdqr hdpggwtviq rrldgsvnff rnwetykqgf gnidgeywlg leniywltnq
      361 gnykllvtme dwsgrkvfae yasfrlepes eyyklrlgry hgnagdsftw hngkqfttld
      421 rdhdvytgnc ahyqkggwwy nacahsnlng vwyrgghyrs ryqdgvywae frggsyslkk
      481 vvmmirpnpn tfh
//
LOCUS       XP_061010602             585 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1
            [Dama dama].
ACCESSION   XP_061010602
VERSION     XP_061010602.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154619.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..585
                     /product="ras-specific guanine nucleotide-releasing factor
                     RalGPS1 isoform X1"
                     /calculated_mol_wt=65178
     Region          46..288
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases; smart00147"
                     /db_xref="CDD:214539"
     Site            order(79..81,91..92,94..96,98..99,102..103,106,139,
                     142..143,145..147,149..152,154..155,175,178,183..185,188,
                     202..204,207..209,211..213,215..218,235,239,277,280..281)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     Region          461..576
                     /region_name="PH_RalGPS1_2"
                     /note="Ral GEF with PH domain and SH3 binding motif 1 and
                     2 Pleckstrin homology (PH) domain; cd13310"
                     /db_xref="CDD:270120"
     CDS             1..585
                     /gene="RALGPS1"
                     /coded_by="XM_061154619.1:294..2051"
                     /db_xref="GeneID:133064470"
ORIGIN      
        1 mykrnglmas vlvtsatpqg ssssdslegq scdyasksyd avvfdvlkvt peefasqitl
       61 mdipvfkaiq peelascgws kkekhslapn vvaftrrfnq vsfwvvreil taqtlkirae
      121 ilshfvkiak kllelnnlhs lmsvvsalqs apifrltktw allnrkdktt fekldylmsk
      181 ednykrtrey irslkmvpsi pylgiylldl iyidsaypas gsimeneqrs nqmnnilrii
      241 adlqvscsyd hlttlphvqk ylksvryiee lqkfveddny klslriepgs ssprlvsske
      301 dlagpssgss sarfsrrptc pdasvagslp tppvprhrks hslgnnmmcq lsvvesksat
      361 fpsekarhll ddsvlesrsp rrglalasss avtnglslgs sessefseem ssglesrgrl
      421 yatlgpnwrv pvrnsprtrs cvysptgpci ctlgssaaap tmegplrrkt llkegrkpal
      481 sswtrywvil sgstllyyga kslrgtdrkh ykstpgkkvs vvgwmvqlpd dpehpdifql
      541 nnpdkgnvyk fqtgsrfhai lwhkhlddac ksnrpqvpan lmsfe
//
LOCUS       XP_061010603             585 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1
            [Dama dama].
ACCESSION   XP_061010603
VERSION     XP_061010603.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154620.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..585
                     /product="ras-specific guanine nucleotide-releasing factor
                     RalGPS1 isoform X1"
                     /calculated_mol_wt=65178
     Region          46..288
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases; smart00147"
                     /db_xref="CDD:214539"
     Site            order(79..81,91..92,94..96,98..99,102..103,106,139,
                     142..143,145..147,149..152,154..155,175,178,183..185,188,
                     202..204,207..209,211..213,215..218,235,239,277,280..281)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     Region          461..576
                     /region_name="PH_RalGPS1_2"
                     /note="Ral GEF with PH domain and SH3 binding motif 1 and
                     2 Pleckstrin homology (PH) domain; cd13310"
                     /db_xref="CDD:270120"
     CDS             1..585
                     /gene="RALGPS1"
                     /coded_by="XM_061154620.1:257..2014"
                     /db_xref="GeneID:133064470"
ORIGIN      
        1 mykrnglmas vlvtsatpqg ssssdslegq scdyasksyd avvfdvlkvt peefasqitl
       61 mdipvfkaiq peelascgws kkekhslapn vvaftrrfnq vsfwvvreil taqtlkirae
      121 ilshfvkiak kllelnnlhs lmsvvsalqs apifrltktw allnrkdktt fekldylmsk
      181 ednykrtrey irslkmvpsi pylgiylldl iyidsaypas gsimeneqrs nqmnnilrii
      241 adlqvscsyd hlttlphvqk ylksvryiee lqkfveddny klslriepgs ssprlvsske
      301 dlagpssgss sarfsrrptc pdasvagslp tppvprhrks hslgnnmmcq lsvvesksat
      361 fpsekarhll ddsvlesrsp rrglalasss avtnglslgs sessefseem ssglesrgrl
      421 yatlgpnwrv pvrnsprtrs cvysptgpci ctlgssaaap tmegplrrkt llkegrkpal
      481 sswtrywvil sgstllyyga kslrgtdrkh ykstpgkkvs vvgwmvqlpd dpehpdifql
      541 nnpdkgnvyk fqtgsrfhai lwhkhlddac ksnrpqvpan lmsfe
//
LOCUS       XP_061010604             585 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1
            [Dama dama].
ACCESSION   XP_061010604
VERSION     XP_061010604.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154621.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..585
                     /product="ras-specific guanine nucleotide-releasing factor
                     RalGPS1 isoform X1"
                     /calculated_mol_wt=65178
     Region          46..288
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases; smart00147"
                     /db_xref="CDD:214539"
     Site            order(79..81,91..92,94..96,98..99,102..103,106,139,
                     142..143,145..147,149..152,154..155,175,178,183..185,188,
                     202..204,207..209,211..213,215..218,235,239,277,280..281)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     Region          461..576
                     /region_name="PH_RalGPS1_2"
                     /note="Ral GEF with PH domain and SH3 binding motif 1 and
                     2 Pleckstrin homology (PH) domain; cd13310"
                     /db_xref="CDD:270120"
     CDS             1..585
                     /gene="RALGPS1"
                     /coded_by="XM_061154621.1:245..2002"
                     /db_xref="GeneID:133064470"
ORIGIN      
        1 mykrnglmas vlvtsatpqg ssssdslegq scdyasksyd avvfdvlkvt peefasqitl
       61 mdipvfkaiq peelascgws kkekhslapn vvaftrrfnq vsfwvvreil taqtlkirae
      121 ilshfvkiak kllelnnlhs lmsvvsalqs apifrltktw allnrkdktt fekldylmsk
      181 ednykrtrey irslkmvpsi pylgiylldl iyidsaypas gsimeneqrs nqmnnilrii
      241 adlqvscsyd hlttlphvqk ylksvryiee lqkfveddny klslriepgs ssprlvsske
      301 dlagpssgss sarfsrrptc pdasvagslp tppvprhrks hslgnnmmcq lsvvesksat
      361 fpsekarhll ddsvlesrsp rrglalasss avtnglslgs sessefseem ssglesrgrl
      421 yatlgpnwrv pvrnsprtrs cvysptgpci ctlgssaaap tmegplrrkt llkegrkpal
      481 sswtrywvil sgstllyyga kslrgtdrkh ykstpgkkvs vvgwmvqlpd dpehpdifql
      541 nnpdkgnvyk fqtgsrfhai lwhkhlddac ksnrpqvpan lmsfe
//
LOCUS       XP_061010606             585 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1
            [Dama dama].
ACCESSION   XP_061010606
VERSION     XP_061010606.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154623.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..585
                     /product="ras-specific guanine nucleotide-releasing factor
                     RalGPS1 isoform X1"
                     /calculated_mol_wt=65178
     Region          46..288
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases; smart00147"
                     /db_xref="CDD:214539"
     Site            order(79..81,91..92,94..96,98..99,102..103,106,139,
                     142..143,145..147,149..152,154..155,175,178,183..185,188,
                     202..204,207..209,211..213,215..218,235,239,277,280..281)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     Region          461..576
                     /region_name="PH_RalGPS1_2"
                     /note="Ral GEF with PH domain and SH3 binding motif 1 and
                     2 Pleckstrin homology (PH) domain; cd13310"
                     /db_xref="CDD:270120"
     CDS             1..585
                     /gene="RALGPS1"
                     /coded_by="XM_061154623.1:257..2014"
                     /db_xref="GeneID:133064470"
ORIGIN      
        1 mykrnglmas vlvtsatpqg ssssdslegq scdyasksyd avvfdvlkvt peefasqitl
       61 mdipvfkaiq peelascgws kkekhslapn vvaftrrfnq vsfwvvreil taqtlkirae
      121 ilshfvkiak kllelnnlhs lmsvvsalqs apifrltktw allnrkdktt fekldylmsk
      181 ednykrtrey irslkmvpsi pylgiylldl iyidsaypas gsimeneqrs nqmnnilrii
      241 adlqvscsyd hlttlphvqk ylksvryiee lqkfveddny klslriepgs ssprlvsske
      301 dlagpssgss sarfsrrptc pdasvagslp tppvprhrks hslgnnmmcq lsvvesksat
      361 fpsekarhll ddsvlesrsp rrglalasss avtnglslgs sessefseem ssglesrgrl
      421 yatlgpnwrv pvrnsprtrs cvysptgpci ctlgssaaap tmegplrrkt llkegrkpal
      481 sswtrywvil sgstllyyga kslrgtdrkh ykstpgkkvs vvgwmvqlpd dpehpdifql
      541 nnpdkgnvyk fqtgsrfhai lwhkhlddac ksnrpqvpan lmsfe
//
LOCUS       XP_061010607             585 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1
            [Dama dama].
ACCESSION   XP_061010607
VERSION     XP_061010607.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154624.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..585
                     /product="ras-specific guanine nucleotide-releasing factor
                     RalGPS1 isoform X1"
                     /calculated_mol_wt=65178
     Region          46..288
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases; smart00147"
                     /db_xref="CDD:214539"
     Site            order(79..81,91..92,94..96,98..99,102..103,106,139,
                     142..143,145..147,149..152,154..155,175,178,183..185,188,
                     202..204,207..209,211..213,215..218,235,239,277,280..281)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     Region          461..576
                     /region_name="PH_RalGPS1_2"
                     /note="Ral GEF with PH domain and SH3 binding motif 1 and
                     2 Pleckstrin homology (PH) domain; cd13310"
                     /db_xref="CDD:270120"
     CDS             1..585
                     /gene="RALGPS1"
                     /coded_by="XM_061154624.1:240..1997"
                     /db_xref="GeneID:133064470"
ORIGIN      
        1 mykrnglmas vlvtsatpqg ssssdslegq scdyasksyd avvfdvlkvt peefasqitl
       61 mdipvfkaiq peelascgws kkekhslapn vvaftrrfnq vsfwvvreil taqtlkirae
      121 ilshfvkiak kllelnnlhs lmsvvsalqs apifrltktw allnrkdktt fekldylmsk
      181 ednykrtrey irslkmvpsi pylgiylldl iyidsaypas gsimeneqrs nqmnnilrii
      241 adlqvscsyd hlttlphvqk ylksvryiee lqkfveddny klslriepgs ssprlvsske
      301 dlagpssgss sarfsrrptc pdasvagslp tppvprhrks hslgnnmmcq lsvvesksat
      361 fpsekarhll ddsvlesrsp rrglalasss avtnglslgs sessefseem ssglesrgrl
      421 yatlgpnwrv pvrnsprtrs cvysptgpci ctlgssaaap tmegplrrkt llkegrkpal
      481 sswtrywvil sgstllyyga kslrgtdrkh ykstpgkkvs vvgwmvqlpd dpehpdifql
      541 nnpdkgnvyk fqtgsrfhai lwhkhlddac ksnrpqvpan lmsfe
//
LOCUS       XP_061010608             585 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1
            [Dama dama].
ACCESSION   XP_061010608
VERSION     XP_061010608.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154625.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..585
                     /product="ras-specific guanine nucleotide-releasing factor
                     RalGPS1 isoform X1"
                     /calculated_mol_wt=65178
     Region          46..288
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases; smart00147"
                     /db_xref="CDD:214539"
     Site            order(79..81,91..92,94..96,98..99,102..103,106,139,
                     142..143,145..147,149..152,154..155,175,178,183..185,188,
                     202..204,207..209,211..213,215..218,235,239,277,280..281)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     Region          461..576
                     /region_name="PH_RalGPS1_2"
                     /note="Ral GEF with PH domain and SH3 binding motif 1 and
                     2 Pleckstrin homology (PH) domain; cd13310"
                     /db_xref="CDD:270120"
     CDS             1..585
                     /gene="RALGPS1"
                     /coded_by="XM_061154625.1:198..1955"
                     /db_xref="GeneID:133064470"
ORIGIN      
        1 mykrnglmas vlvtsatpqg ssssdslegq scdyasksyd avvfdvlkvt peefasqitl
       61 mdipvfkaiq peelascgws kkekhslapn vvaftrrfnq vsfwvvreil taqtlkirae
      121 ilshfvkiak kllelnnlhs lmsvvsalqs apifrltktw allnrkdktt fekldylmsk
      181 ednykrtrey irslkmvpsi pylgiylldl iyidsaypas gsimeneqrs nqmnnilrii
      241 adlqvscsyd hlttlphvqk ylksvryiee lqkfveddny klslriepgs ssprlvsske
      301 dlagpssgss sarfsrrptc pdasvagslp tppvprhrks hslgnnmmcq lsvvesksat
      361 fpsekarhll ddsvlesrsp rrglalasss avtnglslgs sessefseem ssglesrgrl
      421 yatlgpnwrv pvrnsprtrs cvysptgpci ctlgssaaap tmegplrrkt llkegrkpal
      481 sswtrywvil sgstllyyga kslrgtdrkh ykstpgkkvs vvgwmvqlpd dpehpdifql
      541 nnpdkgnvyk fqtgsrfhai lwhkhlddac ksnrpqvpan lmsfe
//
LOCUS       XP_061010609             585 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1
            [Dama dama].
ACCESSION   XP_061010609
VERSION     XP_061010609.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154626.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..585
                     /product="ras-specific guanine nucleotide-releasing factor
                     RalGPS1 isoform X1"
                     /calculated_mol_wt=65178
     Region          46..288
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases; smart00147"
                     /db_xref="CDD:214539"
     Site            order(79..81,91..92,94..96,98..99,102..103,106,139,
                     142..143,145..147,149..152,154..155,175,178,183..185,188,
                     202..204,207..209,211..213,215..218,235,239,277,280..281)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     Region          461..576
                     /region_name="PH_RalGPS1_2"
                     /note="Ral GEF with PH domain and SH3 binding motif 1 and
                     2 Pleckstrin homology (PH) domain; cd13310"
                     /db_xref="CDD:270120"
     CDS             1..585
                     /gene="RALGPS1"
                     /coded_by="XM_061154626.1:194..1951"
                     /db_xref="GeneID:133064470"
ORIGIN      
        1 mykrnglmas vlvtsatpqg ssssdslegq scdyasksyd avvfdvlkvt peefasqitl
       61 mdipvfkaiq peelascgws kkekhslapn vvaftrrfnq vsfwvvreil taqtlkirae
      121 ilshfvkiak kllelnnlhs lmsvvsalqs apifrltktw allnrkdktt fekldylmsk
      181 ednykrtrey irslkmvpsi pylgiylldl iyidsaypas gsimeneqrs nqmnnilrii
      241 adlqvscsyd hlttlphvqk ylksvryiee lqkfveddny klslriepgs ssprlvsske
      301 dlagpssgss sarfsrrptc pdasvagslp tppvprhrks hslgnnmmcq lsvvesksat
      361 fpsekarhll ddsvlesrsp rrglalasss avtnglslgs sessefseem ssglesrgrl
      421 yatlgpnwrv pvrnsprtrs cvysptgpci ctlgssaaap tmegplrrkt llkegrkpal
      481 sswtrywvil sgstllyyga kslrgtdrkh ykstpgkkvs vvgwmvqlpd dpehpdifql
      541 nnpdkgnvyk fqtgsrfhai lwhkhlddac ksnrpqvpan lmsfe
//
LOCUS       XP_061010610             585 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1
            [Dama dama].
ACCESSION   XP_061010610
VERSION     XP_061010610.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154627.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..585
                     /product="ras-specific guanine nucleotide-releasing factor
                     RalGPS1 isoform X1"
                     /calculated_mol_wt=65178
     Region          46..288
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases; smart00147"
                     /db_xref="CDD:214539"
     Site            order(79..81,91..92,94..96,98..99,102..103,106,139,
                     142..143,145..147,149..152,154..155,175,178,183..185,188,
                     202..204,207..209,211..213,215..218,235,239,277,280..281)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     Region          461..576
                     /region_name="PH_RalGPS1_2"
                     /note="Ral GEF with PH domain and SH3 binding motif 1 and
                     2 Pleckstrin homology (PH) domain; cd13310"
                     /db_xref="CDD:270120"
     CDS             1..585
                     /gene="RALGPS1"
                     /coded_by="XM_061154627.1:166..1923"
                     /db_xref="GeneID:133064470"
ORIGIN      
        1 mykrnglmas vlvtsatpqg ssssdslegq scdyasksyd avvfdvlkvt peefasqitl
       61 mdipvfkaiq peelascgws kkekhslapn vvaftrrfnq vsfwvvreil taqtlkirae
      121 ilshfvkiak kllelnnlhs lmsvvsalqs apifrltktw allnrkdktt fekldylmsk
      181 ednykrtrey irslkmvpsi pylgiylldl iyidsaypas gsimeneqrs nqmnnilrii
      241 adlqvscsyd hlttlphvqk ylksvryiee lqkfveddny klslriepgs ssprlvsske
      301 dlagpssgss sarfsrrptc pdasvagslp tppvprhrks hslgnnmmcq lsvvesksat
      361 fpsekarhll ddsvlesrsp rrglalasss avtnglslgs sessefseem ssglesrgrl
      421 yatlgpnwrv pvrnsprtrs cvysptgpci ctlgssaaap tmegplrrkt llkegrkpal
      481 sswtrywvil sgstllyyga kslrgtdrkh ykstpgkkvs vvgwmvqlpd dpehpdifql
      541 nnpdkgnvyk fqtgsrfhai lwhkhlddac ksnrpqvpan lmsfe
//
LOCUS       XP_061010611             585 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1
            [Dama dama].
ACCESSION   XP_061010611
VERSION     XP_061010611.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154628.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..585
                     /product="ras-specific guanine nucleotide-releasing factor
                     RalGPS1 isoform X1"
                     /calculated_mol_wt=65178
     Region          46..288
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases; smart00147"
                     /db_xref="CDD:214539"
     Site            order(79..81,91..92,94..96,98..99,102..103,106,139,
                     142..143,145..147,149..152,154..155,175,178,183..185,188,
                     202..204,207..209,211..213,215..218,235,239,277,280..281)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     Region          461..576
                     /region_name="PH_RalGPS1_2"
                     /note="Ral GEF with PH domain and SH3 binding motif 1 and
                     2 Pleckstrin homology (PH) domain; cd13310"
                     /db_xref="CDD:270120"
     CDS             1..585
                     /gene="RALGPS1"
                     /coded_by="XM_061154628.1:181..1938"
                     /db_xref="GeneID:133064470"
ORIGIN      
        1 mykrnglmas vlvtsatpqg ssssdslegq scdyasksyd avvfdvlkvt peefasqitl
       61 mdipvfkaiq peelascgws kkekhslapn vvaftrrfnq vsfwvvreil taqtlkirae
      121 ilshfvkiak kllelnnlhs lmsvvsalqs apifrltktw allnrkdktt fekldylmsk
      181 ednykrtrey irslkmvpsi pylgiylldl iyidsaypas gsimeneqrs nqmnnilrii
      241 adlqvscsyd hlttlphvqk ylksvryiee lqkfveddny klslriepgs ssprlvsske
      301 dlagpssgss sarfsrrptc pdasvagslp tppvprhrks hslgnnmmcq lsvvesksat
      361 fpsekarhll ddsvlesrsp rrglalasss avtnglslgs sessefseem ssglesrgrl
      421 yatlgpnwrv pvrnsprtrs cvysptgpci ctlgssaaap tmegplrrkt llkegrkpal
      481 sswtrywvil sgstllyyga kslrgtdrkh ykstpgkkvs vvgwmvqlpd dpehpdifql
      541 nnpdkgnvyk fqtgsrfhai lwhkhlddac ksnrpqvpan lmsfe
//
LOCUS       XP_061010612             584 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X2
            [Dama dama].
ACCESSION   XP_061010612
VERSION     XP_061010612.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154629.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..584
                     /product="ras-specific guanine nucleotide-releasing factor
                     RalGPS1 isoform X2"
                     /calculated_mol_wt=65091
     Region          46..288
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases; smart00147"
                     /db_xref="CDD:214539"
     Site            order(79..81,91..92,94..96,98..99,102..103,106,139,
                     142..143,145..147,149..152,154..155,175,178,183..185,188,
                     202..204,207..209,211..213,215..218,235,239,277,280..281)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     Region          460..575
                     /region_name="PH_RalGPS1_2"
                     /note="Ral GEF with PH domain and SH3 binding motif 1 and
                     2 Pleckstrin homology (PH) domain; cd13310"
                     /db_xref="CDD:270120"
     CDS             1..584
                     /gene="RALGPS1"
                     /coded_by="XM_061154629.1:294..2048"
                     /db_xref="GeneID:133064470"
ORIGIN      
        1 mykrnglmas vlvtsatpqg ssssdslegq scdyasksyd avvfdvlkvt peefasqitl
       61 mdipvfkaiq peelascgws kkekhslapn vvaftrrfnq vsfwvvreil taqtlkirae
      121 ilshfvkiak kllelnnlhs lmsvvsalqs apifrltktw allnrkdktt fekldylmsk
      181 ednykrtrey irslkmvpsi pylgiylldl iyidsaypas gsimeneqrs nqmnnilrii
      241 adlqvscsyd hlttlphvqk ylksvryiee lqkfveddny klslriepgs ssprlvsske
      301 dlagpssgss sarfsrrptc pdasvagslp tppvprhrks hslgnnmmcq lsvvesksat
      361 fpsekarhll ddsvlesrsp rrglalasss avtnglslgs sessefseem ssglergrly
      421 atlgpnwrvp vrnsprtrsc vysptgpcic tlgssaaapt megplrrktl lkegrkpals
      481 swtrywvils gstllyygak slrgtdrkhy kstpgkkvsv vgwmvqlpdd pehpdifqln
      541 npdkgnvykf qtgsrfhail whkhlddack snrpqvpanl msfe
//
LOCUS       XP_061010613             580 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X3
            [Dama dama].
ACCESSION   XP_061010613
VERSION     XP_061010613.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154630.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..580
                     /product="ras-specific guanine nucleotide-releasing factor
                     RalGPS1 isoform X3"
                     /calculated_mol_wt=64629
     Region          46..288
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases; smart00147"
                     /db_xref="CDD:214539"
     Site            order(79..81,91..92,94..96,98..99,102..103,106,139,
                     142..143,145..147,149..152,154..155,175,178,183..185,188,
                     202..204,207..209,211..213,215..218,235,239,277,280..281)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     Region          461..576
                     /region_name="PH_RalGPS1_2"
                     /note="Ral GEF with PH domain and SH3 binding motif 1 and
                     2 Pleckstrin homology (PH) domain; cd13310"
                     /db_xref="CDD:270120"
     CDS             1..580
                     /gene="RALGPS1"
                     /coded_by="XM_061154630.1:295..2037"
                     /db_xref="GeneID:133064470"
ORIGIN      
        1 mykrnglmas vlvtsatpqg ssssdslegq scdyasksyd avvfdvlkvt peefasqitl
       61 mdipvfkaiq peelascgws kkekhslapn vvaftrrfnq vsfwvvreil taqtlkirae
      121 ilshfvkiak kllelnnlhs lmsvvsalqs apifrltktw allnrkdktt fekldylmsk
      181 ednykrtrey irslkmvpsi pylgiylldl iyidsaypas gsimeneqrs nqmnnilrii
      241 adlqvscsyd hlttlphvqk ylksvryiee lqkfveddny klslriepgs ssprlvsske
      301 dlagpssgss sarfsrrptc pdasvagslp tppvprhrks hslgnnmmcq lsvvesksat
      361 fpsekarhll ddsvlesrsp rrglalasss avtnglslgs sessefseem ssglesrgrl
      421 yatlgpnwrv pvrnsprtrs cvysptgpci ctlgssaaap tmegplrrkt llkegrkpal
      481 sswtrywvil sgstllyyga kslrgtdrkh ykstpgkkvs vvgwmvqlpd dpehpdifql
      541 nnpdkgnvyk fqtgsrfhai lwhkhlddac ksnrpqqtnp
//
LOCUS       XP_061010614             549 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X4
            [Dama dama].
ACCESSION   XP_061010614
VERSION     XP_061010614.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154631.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..549
                     /product="ras-specific guanine nucleotide-releasing factor
                     RalGPS1 isoform X4"
                     /calculated_mol_wt=61377
     Region          21..252
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases; smart00147"
                     /db_xref="CDD:214539"
     Site            order(43..45,55..56,58..60,62..63,66..67,70,103,106..107,
                     109..111,113..116,118..119,139,142,147..149,152,166..168,
                     171..173,175..177,179..182,199,203,241,244..245)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     Region          425..540
                     /region_name="PH_RalGPS1_2"
                     /note="Ral GEF with PH domain and SH3 binding motif 1 and
                     2 Pleckstrin homology (PH) domain; cd13310"
                     /db_xref="CDD:270120"
     CDS             1..549
                     /gene="RALGPS1"
                     /coded_by="XM_061154631.1:295..1944"
                     /db_xref="GeneID:133064470"
ORIGIN      
        1 mykrnglmas vlvtsatpqs qitlmdipvf kaiqpeelas cgwskkekhs lapnvvaftr
       61 rfnqvsfwvv reiltaqtlk iraeilshfv kiakklleln nlhslmsvvs alqsapifrl
      121 tktwallnrk dkttfekldy lmskednykr treyirslkm vpsipylgiy lldliyidsa
      181 ypasgsimen eqrsnqmnni lriiadlqvs csydhlttlp hvqkylksvr yieelqkfve
      241 ddnyklslri epgsssprlv sskedlagps sgsssarfsr rptcpdasva gslptppvpr
      301 hrkshslgnn mmcqlsvves ksatfpseka rhllddsvle srsprrglal asssavtngl
      361 slgssessef seemssgles rgrlyatlgp nwrvpvrnsp rtrscvyspt gpcictlgss
      421 aaaptmegpl rrktllkegr kpalsswtry wvilsgstll yygakslrgt drkhykstpg
      481 kkvsvvgwmv qlpddpehpd ifqlnnpdkg nvykfqtgsr fhailwhkhl ddacksnrpq
      541 vpanlmsfe
//
LOCUS       XP_061010615             515 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X5
            [Dama dama].
ACCESSION   XP_061010615
VERSION     XP_061010615.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154632.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..515
                     /product="ras-specific guanine nucleotide-releasing factor
                     RalGPS1 isoform X5"
                     /calculated_mol_wt=57814
     Region          46..288
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases; smart00147"
                     /db_xref="CDD:214539"
     Site            order(79..81,91..92,94..96,98..99,102..103,106,139,
                     142..143,145..147,149..152,154..155,175,178,183..185,188,
                     202..204,207..209,211..213,215..218,235,239,277,280..281)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     Region          391..506
                     /region_name="PH_RalGPS1_2"
                     /note="Ral GEF with PH domain and SH3 binding motif 1 and
                     2 Pleckstrin homology (PH) domain; cd13310"
                     /db_xref="CDD:270120"
     CDS             1..515
                     /gene="RALGPS1"
                     /coded_by="XM_061154632.1:292..1839"
                     /db_xref="GeneID:133064470"
ORIGIN      
        1 mykrnglmas vlvtsatpqg ssssdslegq scdyasksyd avvfdvlkvt peefasqitl
       61 mdipvfkaiq peelascgws kkekhslapn vvaftrrfnq vsfwvvreil taqtlkirae
      121 ilshfvkiak kllelnnlhs lmsvvsalqs apifrltktw allnrkdktt fekldylmsk
      181 ednykrtrey irslkmvpsi pylgiylldl iyidsaypas gsimeneqrs nqmnnilrii
      241 adlqvscsyd hlttlphvqk ylksvryiee lqkfveddny klslriepgs ssprlvsske
      301 dlagpssgss sarfsrrptc pdasvagslp tppvprhrks hslgnnrgrl yatlgpnwrv
      361 pvrnsprtrs cvysptgpci ctlgssaaap tmegplrrkt llkegrkpal sswtrywvil
      421 sgstllyyga kslrgtdrkh ykstpgkkvs vvgwmvqlpd dpehpdifql nnpdkgnvyk
      481 fqtgsrfhai lwhkhlddac ksnrpqvpan lmsfe
//
LOCUS       XP_061010616             514 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X6
            [Dama dama].
ACCESSION   XP_061010616
VERSION     XP_061010616.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154633.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..514
                     /product="ras-specific guanine nucleotide-releasing factor
                     RalGPS1 isoform X6"
                     /calculated_mol_wt=57671
     Region          46..288
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases; smart00147"
                     /db_xref="CDD:214539"
     Site            order(79..81,91..92,94..96,98..99,102..103,106,139,
                     142..143,145..147,149..152,154..155,175,178,183..185,188,
                     202..204,207..209,211..213,215..218,235,239,277,280..281)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     Region          390..505
                     /region_name="PH_RalGPS1_2"
                     /note="Ral GEF with PH domain and SH3 binding motif 1 and
                     2 Pleckstrin homology (PH) domain; cd13310"
                     /db_xref="CDD:270120"
     CDS             1..514
                     /gene="RALGPS1"
                     /coded_by="XM_061154633.1:292..1836"
                     /db_xref="GeneID:133064470"
ORIGIN      
        1 mykrnglmas vlvtsatpqg ssssdslegq scdyasksyd avvfdvlkvt peefasqitl
       61 mdipvfkaiq peelascgws kkekhslapn vvaftrrfnq vsfwvvreil taqtlkirae
      121 ilshfvkiak kllelnnlhs lmsvvsalqs apifrltktw allnrkdktt fekldylmsk
      181 ednykrtrey irslkmvpsi pylgiylldl iyidsaypas gsimeneqrs nqmnnilrii
      241 adlqvscsyd hlttlphvqk ylksvryiee lqkfveddny klslriepgs ssprlvsske
      301 dlagpssgss sarfsrrptc pdasvagslp tppvprhrks hslgnkgrly atlgpnwrvp
      361 vrnsprtrsc vysptgpcic tlgssaaapt megplrrktl lkegrkpals swtrywvils
      421 gstllyygak slrgtdrkhy kstpgkkvsv vgwmvqlpdd pehpdifqln npdkgnvykf
      481 qtgsrfhail whkhlddack snrpqvpanl msfe
//
LOCUS       XP_061010617             347 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X7
            [Dama dama].
ACCESSION   XP_061010617
VERSION     XP_061010617.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154634.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..347
                     /product="ras-specific guanine nucleotide-releasing factor
                     RalGPS1 isoform X7"
                     /calculated_mol_wt=38933
     Region          46..288
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases; smart00147"
                     /db_xref="CDD:214539"
     Site            order(79..81,91..92,94..96,98..99,102..103,106,139,
                     142..143,145..147,149..152,154..155,175,178,183..185,188,
                     202..204,207..209,211..213,215..218,235,239,277,280..281)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     CDS             1..347
                     /gene="RALGPS1"
                     /coded_by="XM_061154634.1:292..1335"
                     /db_xref="GeneID:133064470"
ORIGIN      
        1 mykrnglmas vlvtsatpqg ssssdslegq scdyasksyd avvfdvlkvt peefasqitl
       61 mdipvfkaiq peelascgws kkekhslapn vvaftrrfnq vsfwvvreil taqtlkirae
      121 ilshfvkiak kllelnnlhs lmsvvsalqs apifrltktw allnrkdktt fekldylmsk
      181 ednykrtrey irslkmvpsi pylgiylldl iyidsaypas gsimeneqrs nqmnnilrii
      241 adlqvscsyd hlttlphvqk ylksvryiee lqkfveddny klslriepgs ssprlvsske
      301 dlagpssgss sarfsrrptc pdasvagslp tppvprhrks hslgnkq
//
LOCUS       XP_061010618             506 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger and BTB domain-containing protein 34 [Dama dama].
ACCESSION   XP_061010618
VERSION     XP_061010618.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154635.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..506
                     /product="zinc finger and BTB domain-containing protein
                     34"
                     /calculated_mol_wt=55942
     Region          11..130
                     /region_name="BTB_POZ_ZBTB34"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in zinc finger and
                     BTB domain-containing protein 34 (ZBTB34); cd18220"
                     /db_xref="CDD:349529"
     Region          380..400
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(385,387,389,391..392,395..396,399,413,415,419..420,
                     423..424,427,441,443,445,447..448,451..452)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          392..417
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          408..428
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(408,411,424,428)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          421..443
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          434..455
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          436..454
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..506
                     /gene="ZBTB34"
                     /coded_by="XM_061154635.1:76..1596"
                     /db_xref="GeneID:133064472"
ORIGIN      
        1 msvemdsssf iqfdvpeyss tvlsqlnelr lqgklcdiiv hiqgqpfrah kavlaasspy
       61 frdhsalstm sglsisvikn pnvfeqllsf cytgrmslql kdvvsfltaa sflqmqcvid
      121 kctqilesih skisvgdvds vtvgaeetse srngvkdssf fanpveispp ycsqvrqptt
      181 ssdlrmettp skalrssrlq eeghsdrgss gsvseyeiqi egdheqgdll gresqitevk
      241 vkmeksdrps csdssslgdd gyhtemvdge qvvavnvgsy gsvlqhaysy cqaasqpagg
      301 vseafgslsn sspsrsmlsc frggrarqkr alsvhlhsdl qglvqgsdse vmvnnpgfes
      361 sprersvrgh wypynerlic iycgksfnqk gsldrhmrlh mgitpfvckf cgkkytrkdq
      421 leyhirghtd dkpfrceicg kcfpfqgtln qhlrknhpgv aevrsrmesp ertdvyaeqk
      481 lendasasem aldsrmeiht vsdapd
//
LOCUS       XP_061010619             498 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger and BTB domain-containing protein 43 [Dama dama].
ACCESSION   XP_061010619
VERSION     XP_061010619.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154636.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..498
                     /product="zinc finger and BTB domain-containing protein
                     43"
                     /calculated_mol_wt=56170
     Region          8..128
                     /region_name="BTB_POZ_ZBTB43"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in zinc finger and
                     BTB domain-containing protein 43 (ZBTB43); cd18227"
                     /db_xref="CDD:349536"
     Region          376..394
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(379,381,383,385..386,389..390,393,407,409,413..414,
                     417..418,421,435,437,439,441..442,445..446)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          402..422
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(402,405,418,422)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          414..437
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          430..447
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..498
                     /gene="ZBTB43"
                     /coded_by="XM_061154636.1:159..1655"
                     /db_xref="GeneID:133064473"
ORIGIN      
        1 mepgtnsfrv efpdfsstil qklnqqrqqg qlcdvsivvq ghifrahkav laasspyfcd
       61 qvllknsrri vlpdvmnprv fenillssyt grlvmpapei vsyltaasfl qmwhvvdkct
      121 evlegnptvl cqklnhgsdh qspsssnyng lvesfelgsg ghtdfpktqe lrdgeneees
      181 tkdelssqlt eheylpsnss tehdrlstem asqdgeegas dsaefhytrp myskpsimah
      241 krwihvkper feqacegmdv hapydehqvt esintmqtey svqpsgveed fhigekkvea
      301 efdeqadesn ydeqvdfygs smeefsgers dgnliwhkqe aalasgysen iemvtgikee
      361 aphlgfsatd klylcqcgks fthksqrdrh msmhlglrpy gcgvcgkkfk mkhhlvghmk
      421 ihtgikpyec nicakrfmwr dsfhrhvtsc tksyeaakae qntteactks yeaakaeqnm
      481 tepctksyea akaeqntt
//
LOCUS       XP_061010621             498 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger and BTB domain-containing protein 43 [Dama dama].
ACCESSION   XP_061010621
VERSION     XP_061010621.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154638.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..498
                     /product="zinc finger and BTB domain-containing protein
                     43"
                     /calculated_mol_wt=56170
     Region          8..128
                     /region_name="BTB_POZ_ZBTB43"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in zinc finger and
                     BTB domain-containing protein 43 (ZBTB43); cd18227"
                     /db_xref="CDD:349536"
     Region          376..394
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(379,381,383,385..386,389..390,393,407,409,413..414,
                     417..418,421,435,437,439,441..442,445..446)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          402..422
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(402,405,418,422)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          414..437
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          430..447
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..498
                     /gene="ZBTB43"
                     /coded_by="XM_061154638.1:262..1758"
                     /db_xref="GeneID:133064473"
ORIGIN      
        1 mepgtnsfrv efpdfsstil qklnqqrqqg qlcdvsivvq ghifrahkav laasspyfcd
       61 qvllknsrri vlpdvmnprv fenillssyt grlvmpapei vsyltaasfl qmwhvvdkct
      121 evlegnptvl cqklnhgsdh qspsssnyng lvesfelgsg ghtdfpktqe lrdgeneees
      181 tkdelssqlt eheylpsnss tehdrlstem asqdgeegas dsaefhytrp myskpsimah
      241 krwihvkper feqacegmdv hapydehqvt esintmqtey svqpsgveed fhigekkvea
      301 efdeqadesn ydeqvdfygs smeefsgers dgnliwhkqe aalasgysen iemvtgikee
      361 aphlgfsatd klylcqcgks fthksqrdrh msmhlglrpy gcgvcgkkfk mkhhlvghmk
      421 ihtgikpyec nicakrfmwr dsfhrhvtsc tksyeaakae qntteactks yeaakaeqnm
      481 tepctksyea akaeqntt
//
LOCUS       XP_061010622             318 aa            linear   MAM 02-DEC-2023
DEFINITION  multivesicular body subunit 12B isoform X1 [Dama dama].
ACCESSION   XP_061010622
VERSION     XP_061010622.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154639.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..318
                     /product="multivesicular body subunit 12B isoform X1"
                     /calculated_mol_wt=35271
     Region          47..298
                     /region_name="DUF2464"
                     /note="Multivesicular body subunit 12; pfam10240"
                     /db_xref="CDD:463017"
     CDS             1..318
                     /gene="MVB12B"
                     /coded_by="XM_061154639.1:66..1022"
                     /db_xref="GeneID:133064474"
ORIGIN      
        1 mrscfcvrrs rdpppppppp ppqrgteeat mpevkdlsea lpetsmdpit gvgvvasrnr
       61 aptgydvvsq tadgvdadlw kdglfkskvt rylcftrsfs kenshlgnvl vdmklidikd
      121 tlpvgfipiq etvdtqevaf rkkrlcikfi prdsteaaic dirimgrtkq appqytfige
      181 lnsmgiwyrm grvprshdas qpttpspssa astpapnlpr hisltlpatf rgrnstrady
      241 eyqhsnlyai samdgvpfmi sekfscvpes mqpfdllgit ikslaeieke yeysfrteqs
      301 aaarlppspt rcqqipqs
//
LOCUS       XP_061010623             288 aa            linear   MAM 02-DEC-2023
DEFINITION  multivesicular body subunit 12B isoform X2 [Dama dama].
ACCESSION   XP_061010623
VERSION     XP_061010623.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154640.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..288
                     /product="multivesicular body subunit 12B isoform X2"
                     /calculated_mol_wt=31930
     Region          17..268
                     /region_name="DUF2464"
                     /note="Multivesicular body subunit 12; pfam10240"
                     /db_xref="CDD:463017"
     CDS             1..288
                     /gene="MVB12B"
                     /coded_by="XM_061154640.1:147..1013"
                     /db_xref="GeneID:133064474"
ORIGIN      
        1 mpevkdlsea lpetsmdpit gvgvvasrnr aptgydvvsq tadgvdadlw kdglfkskvt
       61 rylcftrsfs kenshlgnvl vdmklidikd tlpvgfipiq etvdtqevaf rkkrlcikfi
      121 prdsteaaic dirimgrtkq appqytfige lnsmgiwyrm grvprshdas qpttpspssa
      181 astpapnlpr hisltlpatf rgrnstrady eyqhsnlyai samdgvpfmi sekfscvpes
      241 mqpfdllgit ikslaeieke yeysfrteqs aaarlppspt rcqqipqs
//
LOCUS       XP_061010624             288 aa            linear   MAM 02-DEC-2023
DEFINITION  multivesicular body subunit 12B isoform X2 [Dama dama].
ACCESSION   XP_061010624
VERSION     XP_061010624.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154641.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..288
                     /product="multivesicular body subunit 12B isoform X2"
                     /calculated_mol_wt=31930
     Region          17..268
                     /region_name="DUF2464"
                     /note="Multivesicular body subunit 12; pfam10240"
                     /db_xref="CDD:463017"
     CDS             1..288
                     /gene="MVB12B"
                     /coded_by="XM_061154641.1:84..950"
                     /db_xref="GeneID:133064474"
ORIGIN      
        1 mpevkdlsea lpetsmdpit gvgvvasrnr aptgydvvsq tadgvdadlw kdglfkskvt
       61 rylcftrsfs kenshlgnvl vdmklidikd tlpvgfipiq etvdtqevaf rkkrlcikfi
      121 prdsteaaic dirimgrtkq appqytfige lnsmgiwyrm grvprshdas qpttpspssa
      181 astpapnlpr hisltlpatf rgrnstrady eyqhsnlyai samdgvpfmi sekfscvpes
      241 mqpfdllgit ikslaeieke yeysfrteqs aaarlppspt rcqqipqs
//
LOCUS       XP_061010625             247 aa            linear   MAM 02-DEC-2023
DEFINITION  multivesicular body subunit 12B isoform X3 [Dama dama].
ACCESSION   XP_061010625
VERSION     XP_061010625.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154642.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..247
                     /product="multivesicular body subunit 12B isoform X3"
                     /calculated_mol_wt=27458
     Region          39..227
                     /region_name="DUF2464"
                     /note="Multivesicular body subunit 12; pfam10240"
                     /db_xref="CDD:463017"
     CDS             1..247
                     /gene="MVB12B"
                     /coded_by="XM_061154642.1:28..771"
                     /db_xref="GeneID:133064474"
ORIGIN      
        1 mwvqliscfl ywgeclkisv ikseeekvrv vkcvnaggic vlvsegwsse qvavvdlsla
       61 psgreevafr kkrlcikfip rdsteaaicd irimgrtkqa ppqytfigel nsmgiwyrmg
      121 rvprshdasq pttpspssaa stpapnlprh isltlpatfr grnstradye yqhsnlyais
      181 amdgvpfmis ekfscvpesm qpfdllgiti kslaeiekey eysfrteqsa aarlppsptr
      241 cqqipqs
//
LOCUS       XP_061010626             220 aa            linear   MAM 02-DEC-2023
DEFINITION  multivesicular body subunit 12B isoform X4 [Dama dama].
ACCESSION   XP_061010626
VERSION     XP_061010626.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154643.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..220
                     /product="multivesicular body subunit 12B isoform X4"
                     /calculated_mol_wt=24198
     Region          47..>219
                     /region_name="DUF2464"
                     /note="Multivesicular body subunit 12; pfam10240"
                     /db_xref="CDD:463017"
     CDS             1..220
                     /gene="MVB12B"
                     /coded_by="XM_061154643.1:66..728"
                     /db_xref="GeneID:133064474"
ORIGIN      
        1 mrscfcvrrs rdpppppppp ppqrgteeat mpevkdlsea lpetsmdpit gvgvvasrnr
       61 aptgydvvsq tadgvdadlw kdglfkskvt rylcftrsfs kenshlgnvl vdmklidikd
      121 tlpvgfipiq etvdtqevaf rkkrlcikfi prdsteaaic dirimgrtkq appqytfige
      181 lnsmgiwyrm grvprshdas qpttpspssa astpapnlpr
//
LOCUS       XP_061010627             434 aa            linear   MAM 02-DEC-2023
DEFINITION  pre-B-cell leukemia transcription factor 3 isoform X1 [Dama dama].
ACCESSION   XP_061010627
VERSION     XP_061010627.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154644.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..434
                     /product="pre-B-cell leukemia transcription factor 3
                     isoform X1"
                     /calculated_mol_wt=47059
     Region          45..234
                     /region_name="PBC"
                     /note="PBC domain; pfam03792"
                     /db_xref="CDD:461052"
     Region          236..296
                     /region_name="homeodomain"
                     /note="Homeodomain; DNA binding domains involved in the
                     transcriptional regulation of key eukaryotic developmental
                     processes; may bind to DNA as monomers or as homo- and/or
                     heterodimers, in a sequence-specific manner; cd00086"
                     /db_xref="CDD:238039"
     Site            order(236..240,242,262,268,281,283..284,287..288,290..292,
                     294..295)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     Site            order(238,241,284,287..288,291)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     CDS             1..434
                     /gene="PBX3"
                     /coded_by="XM_061154644.1:57..1361"
                     /db_xref="GeneID:133064476"
ORIGIN      
        1 mddqsrmlqt lagvnlaghs vqggmalppp phghegadgd grkqdigdil hqimtitdqs
       61 ldeaqakkha lnchrmkpal fsvlceikek tglsirgaqe edppdpqlmr ldnmllaegv
      121 sgpekgggsa aaaaaaaasg gssdnsiehs dyrakltqir qiyhteleky eqacneftth
      181 vmnllreqsr trpispkeie rmvgiihrkf ssiqmqlkqs tceavmilrs rfldarrkrr
      241 nfskqateil neyfyshlsn pypseeakee lakkcsitvs qvsnwfgnkr irykknigkf
      301 qeeanlyaak tavtaahava aavqnnqtns pttpnsgssg sfnlpnsgdm fmnmqslngd
      361 syqgsqvgan vqsqvdtlrh vinqtggysd glggnslysp hnlnanggwq dattpssvts
      421 ptegpgsvhs dtsn
//
LOCUS       XP_061010628             359 aa            linear   MAM 02-DEC-2023
DEFINITION  pre-B-cell leukemia transcription factor 3 isoform X2 [Dama dama].
ACCESSION   XP_061010628
VERSION     XP_061010628.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154645.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..359
                     /product="pre-B-cell leukemia transcription factor 3
                     isoform X2"
                     /calculated_mol_wt=39044
     Region          1..159
                     /region_name="PBC"
                     /note="PBC domain; pfam03792"
                     /db_xref="CDD:461052"
     Region          161..221
                     /region_name="homeodomain"
                     /note="Homeodomain; DNA binding domains involved in the
                     transcriptional regulation of key eukaryotic developmental
                     processes; may bind to DNA as monomers or as homo- and/or
                     heterodimers, in a sequence-specific manner; cd00086"
                     /db_xref="CDD:238039"
     Site            order(161..165,167,187,193,206,208..209,212..213,215..217,
                     219..220)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     Site            order(163,166,209,212..213,216)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     CDS             1..359
                     /gene="PBX3"
                     /coded_by="XM_061154645.1:225..1304"
                     /db_xref="GeneID:133064476"
ORIGIN      
        1 mkpalfsvlc eikektglsi rgaqeedppd pqlmrldnml laegvsgpek gggsaaaaaa
       61 aaasggssdn siehsdyrak ltqirqiyht elekyeqacn eftthvmnll reqsrtrpis
      121 pkeiermvgi ihrkfssiqm qlkqstceav milrsrflda rrkrrnfskq ateilneyfy
      181 shlsnpypse eakeelakkc sitvsqvsnw fgnkrirykk nigkfqeean lyaaktavta
      241 ahavaaavqn nqtnspttpn sgssgsfnlp nsgdmfmnmq slngdsyqgs qvganvqsqv
      301 dtlrhvinqt ggysdglggn slysphnlna nggwqdattp ssvtsptegp gsvhsdtsn
//
LOCUS       XP_061010629             351 aa            linear   MAM 02-DEC-2023
DEFINITION  pre-B-cell leukemia transcription factor 3 isoform X3 [Dama dama].
ACCESSION   XP_061010629
VERSION     XP_061010629.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154646.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..351
                     /product="pre-B-cell leukemia transcription factor 3
                     isoform X3"
                     /calculated_mol_wt=38636
     Region          45..234
                     /region_name="PBC"
                     /note="PBC domain; pfam03792"
                     /db_xref="CDD:461052"
     Region          236..296
                     /region_name="homeodomain"
                     /note="Homeodomain; DNA binding domains involved in the
                     transcriptional regulation of key eukaryotic developmental
                     processes; may bind to DNA as monomers or as homo- and/or
                     heterodimers, in a sequence-specific manner; cd00086"
                     /db_xref="CDD:238039"
     Site            order(236..240,242,262,268,281,283..284,287..288,290..292,
                     294..295)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     Site            order(238,241,284,287..288,291)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     CDS             1..351
                     /gene="PBX3"
                     /coded_by="XM_061154646.1:57..1112"
                     /db_xref="GeneID:133064476"
ORIGIN      
        1 mddqsrmlqt lagvnlaghs vqggmalppp phghegadgd grkqdigdil hqimtitdqs
       61 ldeaqakkha lnchrmkpal fsvlceikek tglsirgaqe edppdpqlmr ldnmllaegv
      121 sgpekgggsa aaaaaaaasg gssdnsiehs dyrakltqir qiyhteleky eqacneftth
      181 vmnllreqsr trpispkeie rmvgiihrkf ssiqmqlkqs tceavmilrs rfldarrkrr
      241 nfskqateil neyfyshlsn pypseeakee lakkcsitvs qvsnwfgnkr irykknigkf
      301 qeeanlyaak tavtaahava aavqnnqtns pttpnsggyp pscyqsdgrl q
//
LOCUS       XP_061010630             522 aa            linear   MAM 02-DEC-2023
DEFINITION  target of rapamycin complex 2 subunit MAPKAP1 isoform X1 [Dama
            dama].
ACCESSION   XP_061010630
VERSION     XP_061010630.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154647.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..522
                     /product="target of rapamycin complex 2 subunit MAPKAP1
                     isoform X1"
                     /calculated_mol_wt=58980
     Region          18..129
                     /region_name="SIN1"
                     /note="Stress-activated map kinase interacting protein 1
                     (SIN1); pfam05422"
                     /db_xref="CDD:461648"
     Region          140..266
                     /region_name="CRIM"
                     /note="SAPK-interacting protein 1 (Sin1), middle CRIM
                     domain; pfam16978"
                     /db_xref="CDD:465326"
     Region          383..490
                     /region_name="PH_Avo1"
                     /note="Avo1 Pleckstrin homology (PH) domain; cd13331"
                     /db_xref="CDD:270139"
     Site            order(385..388,399..403,430,452,466..469,474,477..478,481)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:270139"
     Site            order(390,392..393,398,400,427..428,430,464,466)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270139"
     CDS             1..522
                     /gene="MAPKAP1"
                     /coded_by="XM_061154647.1:331..1899"
                     /db_xref="GeneID:133064478"
ORIGIN      
        1 mafldnptii lahirqshvt sddtgmcemv lidhdvdlek ihppsmpgds gseiqgsnge
       61 tqgyvyaqsv ditsswdfgi rrrsntaqrl erlrkerqnq ikckniqwke rnskqsaqel
      121 kslfekkslk ekppnsgkqs ilsvrleqcp lqlnnpfney skfdgkghvg ttatkkidvy
      181 lplhssqdrl lpmtvvtmas arvqdliglv cwqytsegre pklndnvsay clhiaeddge
      241 vdtdfpplds nepihkfgfs tlalvekyss pgltskeslf vrinaahgfs liqvdntkvt
      301 mkeillkavk rrkgsqkisg pqyrlekqse pnvavdlest lesqsawefc lvrenssrad
      361 gvfeedsqid iatvqdmlss hhyksfkvsm ihrlrfttdv qlgisgdkve idpvtsqkas
      421 tkfwikqkpi sidsdllcac dlaeekspsh aifkltylsn hdykhlyfes daatvneivl
      481 kvnyilesra staradyfaq kqrklnrrts fsfqkekksg qq
//
LOCUS       XP_061010631             522 aa            linear   MAM 02-DEC-2023
DEFINITION  target of rapamycin complex 2 subunit MAPKAP1 isoform X1 [Dama
            dama].
ACCESSION   XP_061010631
VERSION     XP_061010631.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154648.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..522
                     /product="target of rapamycin complex 2 subunit MAPKAP1
                     isoform X1"
                     /calculated_mol_wt=58980
     Region          18..129
                     /region_name="SIN1"
                     /note="Stress-activated map kinase interacting protein 1
                     (SIN1); pfam05422"
                     /db_xref="CDD:461648"
     Region          140..266
                     /region_name="CRIM"
                     /note="SAPK-interacting protein 1 (Sin1), middle CRIM
                     domain; pfam16978"
                     /db_xref="CDD:465326"
     Region          383..490
                     /region_name="PH_Avo1"
                     /note="Avo1 Pleckstrin homology (PH) domain; cd13331"
                     /db_xref="CDD:270139"
     Site            order(385..388,399..403,430,452,466..469,474,477..478,481)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:270139"
     Site            order(390,392..393,398,400,427..428,430,464,466)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270139"
     CDS             1..522
                     /gene="MAPKAP1"
                     /coded_by="XM_061154648.1:402..1970"
                     /db_xref="GeneID:133064478"
ORIGIN      
        1 mafldnptii lahirqshvt sddtgmcemv lidhdvdlek ihppsmpgds gseiqgsnge
       61 tqgyvyaqsv ditsswdfgi rrrsntaqrl erlrkerqnq ikckniqwke rnskqsaqel
      121 kslfekkslk ekppnsgkqs ilsvrleqcp lqlnnpfney skfdgkghvg ttatkkidvy
      181 lplhssqdrl lpmtvvtmas arvqdliglv cwqytsegre pklndnvsay clhiaeddge
      241 vdtdfpplds nepihkfgfs tlalvekyss pgltskeslf vrinaahgfs liqvdntkvt
      301 mkeillkavk rrkgsqkisg pqyrlekqse pnvavdlest lesqsawefc lvrenssrad
      361 gvfeedsqid iatvqdmlss hhyksfkvsm ihrlrfttdv qlgisgdkve idpvtsqkas
      421 tkfwikqkpi sidsdllcac dlaeekspsh aifkltylsn hdykhlyfes daatvneivl
      481 kvnyilesra staradyfaq kqrklnrrts fsfqkekksg qq
//
LOCUS       XP_061010632             522 aa            linear   MAM 02-DEC-2023
DEFINITION  target of rapamycin complex 2 subunit MAPKAP1 isoform X1 [Dama
            dama].
ACCESSION   XP_061010632
VERSION     XP_061010632.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154649.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..522
                     /product="target of rapamycin complex 2 subunit MAPKAP1
                     isoform X1"
                     /calculated_mol_wt=58980
     Region          18..129
                     /region_name="SIN1"
                     /note="Stress-activated map kinase interacting protein 1
                     (SIN1); pfam05422"
                     /db_xref="CDD:461648"
     Region          140..266
                     /region_name="CRIM"
                     /note="SAPK-interacting protein 1 (Sin1), middle CRIM
                     domain; pfam16978"
                     /db_xref="CDD:465326"
     Region          383..490
                     /region_name="PH_Avo1"
                     /note="Avo1 Pleckstrin homology (PH) domain; cd13331"
                     /db_xref="CDD:270139"
     Site            order(385..388,399..403,430,452,466..469,474,477..478,481)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:270139"
     Site            order(390,392..393,398,400,427..428,430,464,466)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270139"
     CDS             1..522
                     /gene="MAPKAP1"
                     /coded_by="XM_061154649.1:552..2120"
                     /db_xref="GeneID:133064478"
ORIGIN      
        1 mafldnptii lahirqshvt sddtgmcemv lidhdvdlek ihppsmpgds gseiqgsnge
       61 tqgyvyaqsv ditsswdfgi rrrsntaqrl erlrkerqnq ikckniqwke rnskqsaqel
      121 kslfekkslk ekppnsgkqs ilsvrleqcp lqlnnpfney skfdgkghvg ttatkkidvy
      181 lplhssqdrl lpmtvvtmas arvqdliglv cwqytsegre pklndnvsay clhiaeddge
      241 vdtdfpplds nepihkfgfs tlalvekyss pgltskeslf vrinaahgfs liqvdntkvt
      301 mkeillkavk rrkgsqkisg pqyrlekqse pnvavdlest lesqsawefc lvrenssrad
      361 gvfeedsqid iatvqdmlss hhyksfkvsm ihrlrfttdv qlgisgdkve idpvtsqkas
      421 tkfwikqkpi sidsdllcac dlaeekspsh aifkltylsn hdykhlyfes daatvneivl
      481 kvnyilesra staradyfaq kqrklnrrts fsfqkekksg qq
//
LOCUS       XP_061010633             522 aa            linear   MAM 02-DEC-2023
DEFINITION  target of rapamycin complex 2 subunit MAPKAP1 isoform X1 [Dama
            dama].
ACCESSION   XP_061010633
VERSION     XP_061010633.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154650.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..522
                     /product="target of rapamycin complex 2 subunit MAPKAP1
                     isoform X1"
                     /calculated_mol_wt=58980
     Region          18..129
                     /region_name="SIN1"
                     /note="Stress-activated map kinase interacting protein 1
                     (SIN1); pfam05422"
                     /db_xref="CDD:461648"
     Region          140..266
                     /region_name="CRIM"
                     /note="SAPK-interacting protein 1 (Sin1), middle CRIM
                     domain; pfam16978"
                     /db_xref="CDD:465326"
     Region          383..490
                     /region_name="PH_Avo1"
                     /note="Avo1 Pleckstrin homology (PH) domain; cd13331"
                     /db_xref="CDD:270139"
     Site            order(385..388,399..403,430,452,466..469,474,477..478,481)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:270139"
     Site            order(390,392..393,398,400,427..428,430,464,466)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270139"
     CDS             1..522
                     /gene="MAPKAP1"
                     /coded_by="XM_061154650.1:159..1727"
                     /db_xref="GeneID:133064478"
ORIGIN      
        1 mafldnptii lahirqshvt sddtgmcemv lidhdvdlek ihppsmpgds gseiqgsnge
       61 tqgyvyaqsv ditsswdfgi rrrsntaqrl erlrkerqnq ikckniqwke rnskqsaqel
      121 kslfekkslk ekppnsgkqs ilsvrleqcp lqlnnpfney skfdgkghvg ttatkkidvy
      181 lplhssqdrl lpmtvvtmas arvqdliglv cwqytsegre pklndnvsay clhiaeddge
      241 vdtdfpplds nepihkfgfs tlalvekyss pgltskeslf vrinaahgfs liqvdntkvt
      301 mkeillkavk rrkgsqkisg pqyrlekqse pnvavdlest lesqsawefc lvrenssrad
      361 gvfeedsqid iatvqdmlss hhyksfkvsm ihrlrfttdv qlgisgdkve idpvtsqkas
      421 tkfwikqkpi sidsdllcac dlaeekspsh aifkltylsn hdykhlyfes daatvneivl
      481 kvnyilesra staradyfaq kqrklnrrts fsfqkekksg qq
//
LOCUS       XP_061010634             522 aa            linear   MAM 02-DEC-2023
DEFINITION  target of rapamycin complex 2 subunit MAPKAP1 isoform X1 [Dama
            dama].
ACCESSION   XP_061010634
VERSION     XP_061010634.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154651.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..522
                     /product="target of rapamycin complex 2 subunit MAPKAP1
                     isoform X1"
                     /calculated_mol_wt=58980
     Region          18..129
                     /region_name="SIN1"
                     /note="Stress-activated map kinase interacting protein 1
                     (SIN1); pfam05422"
                     /db_xref="CDD:461648"
     Region          140..266
                     /region_name="CRIM"
                     /note="SAPK-interacting protein 1 (Sin1), middle CRIM
                     domain; pfam16978"
                     /db_xref="CDD:465326"
     Region          383..490
                     /region_name="PH_Avo1"
                     /note="Avo1 Pleckstrin homology (PH) domain; cd13331"
                     /db_xref="CDD:270139"
     Site            order(385..388,399..403,430,452,466..469,474,477..478,481)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:270139"
     Site            order(390,392..393,398,400,427..428,430,464,466)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270139"
     CDS             1..522
                     /gene="MAPKAP1"
                     /coded_by="XM_061154651.1:549..2117"
                     /db_xref="GeneID:133064478"
ORIGIN      
        1 mafldnptii lahirqshvt sddtgmcemv lidhdvdlek ihppsmpgds gseiqgsnge
       61 tqgyvyaqsv ditsswdfgi rrrsntaqrl erlrkerqnq ikckniqwke rnskqsaqel
      121 kslfekkslk ekppnsgkqs ilsvrleqcp lqlnnpfney skfdgkghvg ttatkkidvy
      181 lplhssqdrl lpmtvvtmas arvqdliglv cwqytsegre pklndnvsay clhiaeddge
      241 vdtdfpplds nepihkfgfs tlalvekyss pgltskeslf vrinaahgfs liqvdntkvt
      301 mkeillkavk rrkgsqkisg pqyrlekqse pnvavdlest lesqsawefc lvrenssrad
      361 gvfeedsqid iatvqdmlss hhyksfkvsm ihrlrfttdv qlgisgdkve idpvtsqkas
      421 tkfwikqkpi sidsdllcac dlaeekspsh aifkltylsn hdykhlyfes daatvneivl
      481 kvnyilesra staradyfaq kqrklnrrts fsfqkekksg qq
//
LOCUS       XP_061010635             522 aa            linear   MAM 02-DEC-2023
DEFINITION  target of rapamycin complex 2 subunit MAPKAP1 isoform X1 [Dama
            dama].
ACCESSION   XP_061010635
VERSION     XP_061010635.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154652.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..522
                     /product="target of rapamycin complex 2 subunit MAPKAP1
                     isoform X1"
                     /calculated_mol_wt=58980
     Region          18..129
                     /region_name="SIN1"
                     /note="Stress-activated map kinase interacting protein 1
                     (SIN1); pfam05422"
                     /db_xref="CDD:461648"
     Region          140..266
                     /region_name="CRIM"
                     /note="SAPK-interacting protein 1 (Sin1), middle CRIM
                     domain; pfam16978"
                     /db_xref="CDD:465326"
     Region          383..490
                     /region_name="PH_Avo1"
                     /note="Avo1 Pleckstrin homology (PH) domain; cd13331"
                     /db_xref="CDD:270139"
     Site            order(385..388,399..403,430,452,466..469,474,477..478,481)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:270139"
     Site            order(390,392..393,398,400,427..428,430,464,466)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270139"
     CDS             1..522
                     /gene="MAPKAP1"
                     /coded_by="XM_061154652.1:305..1873"
                     /db_xref="GeneID:133064478"
ORIGIN      
        1 mafldnptii lahirqshvt sddtgmcemv lidhdvdlek ihppsmpgds gseiqgsnge
       61 tqgyvyaqsv ditsswdfgi rrrsntaqrl erlrkerqnq ikckniqwke rnskqsaqel
      121 kslfekkslk ekppnsgkqs ilsvrleqcp lqlnnpfney skfdgkghvg ttatkkidvy
      181 lplhssqdrl lpmtvvtmas arvqdliglv cwqytsegre pklndnvsay clhiaeddge
      241 vdtdfpplds nepihkfgfs tlalvekyss pgltskeslf vrinaahgfs liqvdntkvt
      301 mkeillkavk rrkgsqkisg pqyrlekqse pnvavdlest lesqsawefc lvrenssrad
      361 gvfeedsqid iatvqdmlss hhyksfkvsm ihrlrfttdv qlgisgdkve idpvtsqkas
      421 tkfwikqkpi sidsdllcac dlaeekspsh aifkltylsn hdykhlyfes daatvneivl
      481 kvnyilesra staradyfaq kqrklnrrts fsfqkekksg qq
//
LOCUS       XP_061010636             522 aa            linear   MAM 02-DEC-2023
DEFINITION  target of rapamycin complex 2 subunit MAPKAP1 isoform X1 [Dama
            dama].
ACCESSION   XP_061010636
VERSION     XP_061010636.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154653.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..522
                     /product="target of rapamycin complex 2 subunit MAPKAP1
                     isoform X1"
                     /calculated_mol_wt=58980
     Region          18..129
                     /region_name="SIN1"
                     /note="Stress-activated map kinase interacting protein 1
                     (SIN1); pfam05422"
                     /db_xref="CDD:461648"
     Region          140..266
                     /region_name="CRIM"
                     /note="SAPK-interacting protein 1 (Sin1), middle CRIM
                     domain; pfam16978"
                     /db_xref="CDD:465326"
     Region          383..490
                     /region_name="PH_Avo1"
                     /note="Avo1 Pleckstrin homology (PH) domain; cd13331"
                     /db_xref="CDD:270139"
     Site            order(385..388,399..403,430,452,466..469,474,477..478,481)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:270139"
     Site            order(390,392..393,398,400,427..428,430,464,466)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270139"
     CDS             1..522
                     /gene="MAPKAP1"
                     /coded_by="XM_061154653.1:197..1765"
                     /db_xref="GeneID:133064478"
ORIGIN      
        1 mafldnptii lahirqshvt sddtgmcemv lidhdvdlek ihppsmpgds gseiqgsnge
       61 tqgyvyaqsv ditsswdfgi rrrsntaqrl erlrkerqnq ikckniqwke rnskqsaqel
      121 kslfekkslk ekppnsgkqs ilsvrleqcp lqlnnpfney skfdgkghvg ttatkkidvy
      181 lplhssqdrl lpmtvvtmas arvqdliglv cwqytsegre pklndnvsay clhiaeddge
      241 vdtdfpplds nepihkfgfs tlalvekyss pgltskeslf vrinaahgfs liqvdntkvt
      301 mkeillkavk rrkgsqkisg pqyrlekqse pnvavdlest lesqsawefc lvrenssrad
      361 gvfeedsqid iatvqdmlss hhyksfkvsm ihrlrfttdv qlgisgdkve idpvtsqkas
      421 tkfwikqkpi sidsdllcac dlaeekspsh aifkltylsn hdykhlyfes daatvneivl
      481 kvnyilesra staradyfaq kqrklnrrts fsfqkekksg qq
//
LOCUS       XP_061010637             486 aa            linear   MAM 02-DEC-2023
DEFINITION  target of rapamycin complex 2 subunit MAPKAP1 isoform X2 [Dama
            dama].
ACCESSION   XP_061010637
VERSION     XP_061010637.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154654.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..486
                     /product="target of rapamycin complex 2 subunit MAPKAP1
                     isoform X2"
                     /calculated_mol_wt=54814
     Region          18..129
                     /region_name="SIN1"
                     /note="Stress-activated map kinase interacting protein 1
                     (SIN1); pfam05422"
                     /db_xref="CDD:461648"
     Region          140..266
                     /region_name="CRIM"
                     /note="SAPK-interacting protein 1 (Sin1), middle CRIM
                     domain; pfam16978"
                     /db_xref="CDD:465326"
     Region          347..454
                     /region_name="PH_Avo1"
                     /note="Avo1 Pleckstrin homology (PH) domain; cd13331"
                     /db_xref="CDD:270139"
     Site            order(349..352,363..367,394,416,430..433,438,441..442,445)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:270139"
     Site            order(354,356..357,362,364,391..392,394,428,430)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270139"
     CDS             1..486
                     /gene="MAPKAP1"
                     /coded_by="XM_061154654.1:332..1792"
                     /db_xref="GeneID:133064478"
ORIGIN      
        1 mafldnptii lahirqshvt sddtgmcemv lidhdvdlek ihppsmpgds gseiqgsnge
       61 tqgyvyaqsv ditsswdfgi rrrsntaqrl erlrkerqnq ikckniqwke rnskqsaqel
      121 kslfekkslk ekppnsgkqs ilsvrleqcp lqlnnpfney skfdgkghvg ttatkkidvy
      181 lplhssqdrl lpmtvvtmas arvqdliglv cwqytsegre pklndnvsay clhiaeddge
      241 vdtdfpplds nepihkfgfs tlalvekyss pgltskeslf vrinaahgfs liqvdntkvt
      301 mkeillkavk rrkgsqkisg sradgvfeed sqidiatvqd mlsshhyksf kvsmihrlrf
      361 ttdvqlgisg dkveidpvts qkastkfwik qkpisidsdl lcacdlaeek spshaifklt
      421 ylsnhdykhl yfesdaatvn eivlkvnyil esrastarad yfaqkqrkln rrtsfsfqke
      481 kksgqq
//
LOCUS       XP_061010638             330 aa            linear   MAM 02-DEC-2023
DEFINITION  target of rapamycin complex 2 subunit MAPKAP1 isoform X3 [Dama
            dama].
ACCESSION   XP_061010638
VERSION     XP_061010638.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154655.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..330
                     /product="target of rapamycin complex 2 subunit MAPKAP1
                     isoform X3"
                     /calculated_mol_wt=37176
     Region          <1..74
                     /region_name="CRIM"
                     /note="SAPK-interacting protein 1 (Sin1), middle CRIM
                     domain; pfam16978"
                     /db_xref="CDD:465326"
     Region          191..298
                     /region_name="PH_Avo1"
                     /note="Avo1 Pleckstrin homology (PH) domain; cd13331"
                     /db_xref="CDD:270139"
     Site            order(193..196,207..211,238,260,274..277,282,285..286,289)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:270139"
     Site            order(198,200..201,206,208,235..236,238,272,274)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270139"
     CDS             1..330
                     /gene="MAPKAP1"
                     /coded_by="XM_061154655.1:489..1481"
                     /db_xref="GeneID:133064478"
ORIGIN      
        1 mtvvtmasar vqdliglvcw qytsegrepk lndnvsaycl hiaeddgevd tdfppldsne
       61 pihkfgfstl alvekysspg ltskeslfvr inaahgfsli qvdntkvtmk eillkavkrr
      121 kgsqkisgpq yrlekqsepn vavdlestle sqsawefclv renssradgv feedsqidia
      181 tvqdmlsshh yksfkvsmih rlrfttdvql gisgdkveid pvtsqkastk fwikqkpisi
      241 dsdllcacdl aeekspshai fkltylsnhd ykhlyfesda atvneivlkv nyilesrast
      301 aradyfaqkq rklnrrtsfs fqkekksgqq
//
LOCUS       XP_061010639            1461 aa            linear   MAM 02-DEC-2023
DEFINITION  GTPase-activating protein and VPS9 domain-containing protein 1
            isoform X1 [Dama dama].
ACCESSION   XP_061010639
VERSION     XP_061010639.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154656.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1461
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1461
                     /product="GTPase-activating protein and VPS9
                     domain-containing protein 1 isoform X1"
                     /calculated_mol_wt=162697
     Region          84..449
                     /region_name="RasGAP_RAP6"
                     /note="Ras-GTPase Activating Domain of Rab5-activating
                     protein 6; cd05129"
                     /db_xref="CDD:213331"
     Site            order(129,168,170,172..173,179,182,186,304,312..313,
                     316..317,320,342,345..346,349,353,355,359..360)
                     /site_type="other"
                     /note="putative Rab5 interface [polypeptide binding]"
                     /db_xref="CDD:213331"
     Region          1246..1309
                     /region_name="DUF5601"
                     /note="Domain of unknown function (DUF5601); pfam18151"
                     /db_xref="CDD:465668"
     Region          1357..1458
                     /region_name="VPS9"
                     /note="Vacuolar sorting protein 9 (VPS9) domain;
                     pfam02204"
                     /db_xref="CDD:460489"
     CDS             1..1461
                     /gene="GAPVD1"
                     /coded_by="XM_061154656.1:170..4555"
                     /db_xref="GeneID:133064479"
ORIGIN      
        1 mvkldihtla hhlkqerlyv nsekqliqrl nadvlktaek lyrtawiakq qrinldrlii
       61 tsaeaspaec cqhakiledt qfvdgykqlg fqetaygefl srlrenprli asslvagekl
      121 nqehtqsviy tvftslygnc imqedesyll qvlryliefe lkesdnprrl lrrgtcafsi
      181 lfklfseglf saklfltatl hepimqllve dedhletdpn klierfspaq qeklfgekgs
      241 drfrqkvqem vdsneaklva lvnkfigylk qntycfphsl rwivsqmykt lscvdrlevg
      301 evramctdll lacficpavv npeqygiisd apinevarfn lmqvgrllqq lamtgseegd
      361 prtksslgkf dkscvaafld vviggravet ppmssvnlle glsrtvvyit ysqlitlvnf
      421 mksvmsgdql redrmaldnl lanlpqakpg kssslemtpy ntpqlspatt pankknrlpi
      481 atrsrsrtnv lmdlhmdheg saqetiqevq peevlvislg tgpqltpgmm senevlnmql
      541 sdggqgdvpv denklhgkpd ktlrfslcsd nlegisegps nrsnsvssld legesvselg
      601 agpsgsngve alqlleheqa ttqdnlddkl rkfeirdmmg ltddrdiset vsetwstdvl
      661 gsdfdpnide drlqeiagaa aenvlgsllc lpgsgsvlld pctgstiset tseawsvevl
      721 psdseapdlk qeerlqeles csglgstsdd tdvrevssrp stpglsvvsg isatsedipn
      781 kiedlrsecs sdfggkdsvt spdmdevthg ahqltsppsq sesllamfdp lssheggasa
      841 vvrpkvhyar pshpppdppi legavggnea rlptfgshil tpaemeafkq rhsyperlvr
      901 srssdvvssv rrpmsdpswn rrpgneerel ppaaaigats lvaaphssss spskdssrge
      961 teerkdsdde ksdrnrpwwr krfvsampka pipfrkkekq ekdkddlgpd rfstltddps
     1021 prlsaqaqva edildkyrna ikrtspsega lanyesaevm gdgesahdsp rdetlqnisa
     1081 ddlpdsasqa ahpqdsafsy rdakkklrla lcsadsvafp vlthstrngl pdhtdpedne
     1141 ivcflkvqia eainlqdknl maqlqetmrc vcrfdnrtcr kllasiaedy rkrapyiayl
     1201 trcrqglqtt qahlerllqr vlrdkevanr yfttvcvrll leskekkire fiqdfqklta
     1261 addktaqved flqflygama qdviwqnase eqlqdaqlai ersvmnrifk lafypnqdgd
     1321 ilrdqvlheh iqrlskvvta nhralqipev ylkeapwpsa qseirtisay ktprdkvqci
     1381 lrmcstimnl lslanedsvp gaddfvpvlv fvlikanppc llstvqyisg fyasclsgee
     1441 sywwmqftaa vefiktiddr k
//
LOCUS       XP_061010640            1460 aa            linear   MAM 02-DEC-2023
DEFINITION  GTPase-activating protein and VPS9 domain-containing protein 1
            isoform X2 [Dama dama].
ACCESSION   XP_061010640
VERSION     XP_061010640.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154657.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1460
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1460
                     /product="GTPase-activating protein and VPS9
                     domain-containing protein 1 isoform X2"
                     /calculated_mol_wt=162568
     Region          84..449
                     /region_name="RasGAP_RAP6"
                     /note="Ras-GTPase Activating Domain of Rab5-activating
                     protein 6; cd05129"
                     /db_xref="CDD:213331"
     Site            order(129,168,170,172..173,179,182,186,304,312..313,
                     316..317,320,342,345..346,349,353,355,359..360)
                     /site_type="other"
                     /note="putative Rab5 interface [polypeptide binding]"
                     /db_xref="CDD:213331"
     Region          1245..1308
                     /region_name="DUF5601"
                     /note="Domain of unknown function (DUF5601); pfam18151"
                     /db_xref="CDD:465668"
     Region          1356..1457
                     /region_name="VPS9"
                     /note="Vacuolar sorting protein 9 (VPS9) domain;
                     pfam02204"
                     /db_xref="CDD:460489"
     CDS             1..1460
                     /gene="GAPVD1"
                     /coded_by="XM_061154657.1:170..4552"
                     /db_xref="GeneID:133064479"
ORIGIN      
        1 mvkldihtla hhlkqerlyv nsekqliqrl nadvlktaek lyrtawiakq qrinldrlii
       61 tsaeaspaec cqhakiledt qfvdgykqlg fqetaygefl srlrenprli asslvagekl
      121 nqehtqsviy tvftslygnc imqedesyll qvlryliefe lkesdnprrl lrrgtcafsi
      181 lfklfseglf saklfltatl hepimqllve dedhletdpn klierfspaq qeklfgekgs
      241 drfrqkvqem vdsneaklva lvnkfigylk qntycfphsl rwivsqmykt lscvdrlevg
      301 evramctdll lacficpavv npeqygiisd apinevarfn lmqvgrllqq lamtgseegd
      361 prtksslgkf dkscvaafld vviggravet ppmssvnlle glsrtvvyit ysqlitlvnf
      421 mksvmsgdql redrmaldnl lanlpqakpg kssslemtpy ntpqlspatt pankknrlpi
      481 atrsrsrtnv lmdlhmdheg saqetiqevq peevlvislg tgpqltpgmm senevlnmql
      541 sdggqgdvpv denklhgkpd ktlrfslcsd nlegisegps nrsnsvssld legesvselg
      601 agpsgsngve alqlleheqa ttqdnlddkl rkfeirdmmg ltddrdiset vsetwstdvl
      661 gsdfdpnide drlqeiagaa aenvlgsllc lpgsgsvlld pctgstiset tseawsvevl
      721 psdseapdlk qeerlqeles csglgstsdd tdvrevssrp stpglsvvsg isatsedipn
      781 kiedlrsecs sdfggkdsvt spdmdevthg ahqltsppsq sesllamfdp lssheggasa
      841 vvrpkvhyar pshpppdppi legavggnea rlptfgshil tpaemeafkq rhsyperlvr
      901 srssdvvssv rrpmsdpswn rrpgneerel ppaaaigats lvaaphssss spskdssrge
      961 teerkdsdde ksdrnrpwwr krfvsampka pipfrkkekq ekdkddlgpd rfstltddps
     1021 prlsaqaqva edildkyrna ikrtspsega lanyesavmg dgesahdspr detlqnisad
     1081 dlpdsasqaa hpqdsafsyr dakkklrlal csadsvafpv lthstrnglp dhtdpednei
     1141 vcflkvqiae ainlqdknlm aqlqetmrcv crfdnrtcrk llasiaedyr krapyiaylt
     1201 rcrqglqttq ahlerllqrv lrdkevanry fttvcvrlll eskekkiref iqdfqkltaa
     1261 ddktaqvedf lqflygamaq dviwqnasee qlqdaqlaie rsvmnrifkl afypnqdgdi
     1321 lrdqvlhehi qrlskvvtan hralqipevy lkeapwpsaq seirtisayk tprdkvqcil
     1381 rmcstimnll slanedsvpg addfvpvlvf vlikanppcl lstvqyisgf yasclsgees
     1441 ywwmqftaav efiktiddrk
//
LOCUS       XP_061010641            1440 aa            linear   MAM 02-DEC-2023
DEFINITION  GTPase-activating protein and VPS9 domain-containing protein 1
            isoform X3 [Dama dama].
ACCESSION   XP_061010641
VERSION     XP_061010641.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154658.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1440
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1440
                     /product="GTPase-activating protein and VPS9
                     domain-containing protein 1 isoform X3"
                     /calculated_mol_wt=160406
     Region          84..449
                     /region_name="RasGAP_RAP6"
                     /note="Ras-GTPase Activating Domain of Rab5-activating
                     protein 6; cd05129"
                     /db_xref="CDD:213331"
     Site            order(129,168,170,172..173,179,182,186,304,312..313,
                     316..317,320,342,345..346,349,353,355,359..360)
                     /site_type="other"
                     /note="putative Rab5 interface [polypeptide binding]"
                     /db_xref="CDD:213331"
     Region          1225..1288
                     /region_name="DUF5601"
                     /note="Domain of unknown function (DUF5601); pfam18151"
                     /db_xref="CDD:465668"
     Region          1336..1437
                     /region_name="VPS9"
                     /note="Vacuolar sorting protein 9 (VPS9) domain;
                     pfam02204"
                     /db_xref="CDD:460489"
     CDS             1..1440
                     /gene="GAPVD1"
                     /coded_by="XM_061154658.1:170..4492"
                     /db_xref="GeneID:133064479"
ORIGIN      
        1 mvkldihtla hhlkqerlyv nsekqliqrl nadvlktaek lyrtawiakq qrinldrlii
       61 tsaeaspaec cqhakiledt qfvdgykqlg fqetaygefl srlrenprli asslvagekl
      121 nqehtqsviy tvftslygnc imqedesyll qvlryliefe lkesdnprrl lrrgtcafsi
      181 lfklfseglf saklfltatl hepimqllve dedhletdpn klierfspaq qeklfgekgs
      241 drfrqkvqem vdsneaklva lvnkfigylk qntycfphsl rwivsqmykt lscvdrlevg
      301 evramctdll lacficpavv npeqygiisd apinevarfn lmqvgrllqq lamtgseegd
      361 prtksslgkf dkscvaafld vviggravet ppmssvnlle glsrtvvyit ysqlitlvnf
      421 mksvmsgdql redrmaldnl lanlpqakpg kssslemtpy ntpqlspatt pankknrlpi
      481 atrsrsrtnv lmdlhmdheg saqetiqevq peevlvislg tgpqltpgmm senevlnmql
      541 sdggqgdvpv denklhgpsn rsnsvssldl egesvselga gpsgsngvea lqlleheqat
      601 tqdnlddklr kfeirdmmgl tddrdisetv setwstdvlg sdfdpnided rlqeiagaaa
      661 envlgsllcl pgsgsvlldp ctgstisett seawsvevlp sdseapdlkq eerlqelesc
      721 sglgstsddt dvrevssrps tpglsvvsgi satsedipnk iedlrsecss dfggkdsvts
      781 pdmdevthga hqltsppsqs esllamfdpl ssheggasav vrpkvhyarp shpppdppil
      841 egavggnear lptfgshilt paemeafkqr hsyperlvrs rssdvvssvr rpmsdpswnr
      901 rpgneerelp paaaigatsl vaaphsssss pskdssrget eerkdsddek sdrnrpwwrk
      961 rfvsampkap ipfrkkekqe kdkddlgpdr fstltddpsp rlsaqaqvae dildkyrnai
     1021 krtspsegal anyesaevmg dgesahdspr detlqnisad dlpdsasqaa hpqdsafsyr
     1081 dakkklrlal csadsvafpv lthstrnglp dhtdpednei vcflkvqiae ainlqdknlm
     1141 aqlqetmrcv crfdnrtcrk llasiaedyr krapyiaylt rcrqglqttq ahlerllqrv
     1201 lrdkevanry fttvcvrlll eskekkiref iqdfqkltaa ddktaqvedf lqflygamaq
     1261 dviwqnasee qlqdaqlaie rsvmnrifkl afypnqdgdi lrdqvlhehi qrlskvvtan
     1321 hralqipevy lkeapwpsaq seirtisayk tprdkvqcil rmcstimnll slanedsvpg
     1381 addfvpvlvf vlikanppcl lstvqyisgf yasclsgees ywwmqftaav efiktiddrk
//
LOCUS       XP_061010642            1434 aa            linear   MAM 02-DEC-2023
DEFINITION  GTPase-activating protein and VPS9 domain-containing protein 1
            isoform X4 [Dama dama].
ACCESSION   XP_061010642
VERSION     XP_061010642.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154659.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1434
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1434
                     /product="GTPase-activating protein and VPS9
                     domain-containing protein 1 isoform X4"
                     /calculated_mol_wt=159555
     Region          84..449
                     /region_name="RasGAP_RAP6"
                     /note="Ras-GTPase Activating Domain of Rab5-activating
                     protein 6; cd05129"
                     /db_xref="CDD:213331"
     Site            order(129,168,170,172..173,179,182,186,304,312..313,
                     316..317,320,342,345..346,349,353,355,359..360)
                     /site_type="other"
                     /note="putative Rab5 interface [polypeptide binding]"
                     /db_xref="CDD:213331"
     Region          1219..1282
                     /region_name="DUF5601"
                     /note="Domain of unknown function (DUF5601); pfam18151"
                     /db_xref="CDD:465668"
     Region          1330..1431
                     /region_name="VPS9"
                     /note="Vacuolar sorting protein 9 (VPS9) domain;
                     pfam02204"
                     /db_xref="CDD:460489"
     CDS             1..1434
                     /gene="GAPVD1"
                     /coded_by="XM_061154659.1:170..4474"
                     /db_xref="GeneID:133064479"
ORIGIN      
        1 mvkldihtla hhlkqerlyv nsekqliqrl nadvlktaek lyrtawiakq qrinldrlii
       61 tsaeaspaec cqhakiledt qfvdgykqlg fqetaygefl srlrenprli asslvagekl
      121 nqehtqsviy tvftslygnc imqedesyll qvlryliefe lkesdnprrl lrrgtcafsi
      181 lfklfseglf saklfltatl hepimqllve dedhletdpn klierfspaq qeklfgekgs
      241 drfrqkvqem vdsneaklva lvnkfigylk qntycfphsl rwivsqmykt lscvdrlevg
      301 evramctdll lacficpavv npeqygiisd apinevarfn lmqvgrllqq lamtgseegd
      361 prtksslgkf dkscvaafld vviggravet ppmssvnlle glsrtvvyit ysqlitlvnf
      421 mksvmsgdql redrmaldnl lanlpqakpg kssslemtpy ntpqlspatt pankknrlpi
      481 atrsrsrtnv lmdlhmdheg saqetiqevq peevlvislg tgpqltpgmm senevlnmql
      541 sdggqgdvpv denklhgkpd ktlrfslcsd nlegisegps nrsnsvssld legesvselg
      601 agpsgsngve alqlleheqa ttqdnlddkl rkfeirdmmg ltddrdiset vsetwstdvl
      661 gsdfdpnide drlqeiagaa aenvlgsllc lpgsgsvlld pctgstiset tseawsvevl
      721 psdseapdlk qeerlqeles csglgstsdd tdvrevssrp stpglsvvsg isatsedipn
      781 kiedlrsecs sdfggkdsvt spdmdevthg ahqltsppsq sesllamfdp lssheggasa
      841 vvrpkvhyar pshpppdppi legavggnea rlptfgshil tpaemeafkq rhsyperlvr
      901 srssdvvssv rrpmsdpswn rrpgneerel ppaaaigats lvaaphssss spskdssrge
      961 teerkdsdde ksdrnrpwwr krfvsampkd dpsprlsaqa qvaedildky rnaikrtsps
     1021 egalanyesa evmgdgesah dsprdetlqn isaddlpdsa sqaahpqdsa fsyrdakkkl
     1081 rlalcsadsv afpvlthstr nglpdhtdpe dneivcflkv qiaeainlqd knlmaqlqet
     1141 mrcvcrfdnr tcrkllasia edyrkrapyi ayltrcrqgl qttqahlerl lqrvlrdkev
     1201 anryfttvcv rllleskekk irefiqdfqk ltaaddktaq vedflqflyg amaqdviwqn
     1261 aseeqlqdaq laiersvmnr ifklafypnq dgdilrdqvl hehiqrlskv vtanhralqi
     1321 pevylkeapw psaqseirti sayktprdkv qcilrmcsti mnllslaned svpgaddfvp
     1381 vlvfvlikan ppcllstvqy isgfyascls geesywwmqf taavefikti ddrk
//
LOCUS       XP_061010643            1413 aa            linear   MAM 02-DEC-2023
DEFINITION  GTPase-activating protein and VPS9 domain-containing protein 1
            isoform X5 [Dama dama].
ACCESSION   XP_061010643
VERSION     XP_061010643.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154660.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1413
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1413
                     /product="GTPase-activating protein and VPS9
                     domain-containing protein 1 isoform X5"
                     /calculated_mol_wt=157263
     Region          84..449
                     /region_name="RasGAP_RAP6"
                     /note="Ras-GTPase Activating Domain of Rab5-activating
                     protein 6; cd05129"
                     /db_xref="CDD:213331"
     Site            order(129,168,170,172..173,179,182,186,304,312..313,
                     316..317,320,342,345..346,349,353,355,359..360)
                     /site_type="other"
                     /note="putative Rab5 interface [polypeptide binding]"
                     /db_xref="CDD:213331"
     Region          1198..1261
                     /region_name="DUF5601"
                     /note="Domain of unknown function (DUF5601); pfam18151"
                     /db_xref="CDD:465668"
     Region          1309..1410
                     /region_name="VPS9"
                     /note="Vacuolar sorting protein 9 (VPS9) domain;
                     pfam02204"
                     /db_xref="CDD:460489"
     CDS             1..1413
                     /gene="GAPVD1"
                     /coded_by="XM_061154660.1:170..4411"
                     /db_xref="GeneID:133064479"
ORIGIN      
        1 mvkldihtla hhlkqerlyv nsekqliqrl nadvlktaek lyrtawiakq qrinldrlii
       61 tsaeaspaec cqhakiledt qfvdgykqlg fqetaygefl srlrenprli asslvagekl
      121 nqehtqsviy tvftslygnc imqedesyll qvlryliefe lkesdnprrl lrrgtcafsi
      181 lfklfseglf saklfltatl hepimqllve dedhletdpn klierfspaq qeklfgekgs
      241 drfrqkvqem vdsneaklva lvnkfigylk qntycfphsl rwivsqmykt lscvdrlevg
      301 evramctdll lacficpavv npeqygiisd apinevarfn lmqvgrllqq lamtgseegd
      361 prtksslgkf dkscvaafld vviggravet ppmssvnlle glsrtvvyit ysqlitlvnf
      421 mksvmsgdql redrmaldnl lanlpqakpg kssslemtpy ntpqlspatt pankknrlpi
      481 atrsrsrtnv lmdlhmdheg saqetiqevq peevlvislg tgpqltpgmm senevlnmql
      541 sdggqgdvpv denklhgpsn rsnsvssldl egesvselga gpsgsngvea lqlleheqat
      601 tqdnlddklr kfeirdmmgl tddrdisetv setwstdvlg sdfdpnided rlqeiagaaa
      661 envlgsllcl pgsgsvlldp ctgstisett seawsvevlp sdseapdlkq eerlqelesc
      721 sglgstsddt dvrevssrps tpglsvvsgi satsedipnk iedlrsecss dfggkdsvts
      781 pdmdevthga hqltsppsqs esllamfdpl ssheggasav vrpkvhyarp shpppdppil
      841 egavggnear lptfgshilt paemeafkqr hsyperlvrs rssdvvssvr rpmsdpswnr
      901 rpgneerelp paaaigatsl vaaphsssss pskdssrget eerkdsddek sdrnrpwwrk
      961 rfvsampkdd psprlsaqaq vaedildkyr naikrtspse galanyesae vmgdgesahd
     1021 sprdetlqni saddlpdsas qaahpqdsaf syrdakkklr lalcsadsva fpvlthstrn
     1081 glpdhtdped neivcflkvq iaeainlqdk nlmaqlqetm rcvcrfdnrt crkllasiae
     1141 dyrkrapyia yltrcrqglq ttqahlerll qrvlrdkeva nryfttvcvr llleskekki
     1201 refiqdfqkl taaddktaqv edflqflyga maqdviwqna seeqlqdaql aiersvmnri
     1261 fklafypnqd gdilrdqvlh ehiqrlskvv tanhralqip evylkeapwp saqseirtis
     1321 ayktprdkvq cilrmcstim nllslaneds vpgaddfvpv lvfvlikanp pcllstvqyi
     1381 sgfyasclsg eesywwmqft aavefiktid drk
//
LOCUS       XP_061010644             756 aa            linear   MAM 02-DEC-2023
DEFINITION  GTPase-activating protein and VPS9 domain-containing protein 1
            isoform X6 [Dama dama].
ACCESSION   XP_061010644
VERSION     XP_061010644.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154661.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..756
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..756
                     /product="GTPase-activating protein and VPS9
                     domain-containing protein 1 isoform X6"
                     /calculated_mol_wt=83824
     Region          84..449
                     /region_name="RasGAP_RAP6"
                     /note="Ras-GTPase Activating Domain of Rab5-activating
                     protein 6; cd05129"
                     /db_xref="CDD:213331"
     Site            order(129,168,170,172..173,179,182,186,304,312..313,
                     316..317,320,342,345..346,349,353,355,359..360)
                     /site_type="other"
                     /note="putative Rab5 interface [polypeptide binding]"
                     /db_xref="CDD:213331"
     CDS             1..756
                     /gene="GAPVD1"
                     /coded_by="XM_061154661.1:170..2440"
                     /db_xref="GeneID:133064479"
ORIGIN      
        1 mvkldihtla hhlkqerlyv nsekqliqrl nadvlktaek lyrtawiakq qrinldrlii
       61 tsaeaspaec cqhakiledt qfvdgykqlg fqetaygefl srlrenprli asslvagekl
      121 nqehtqsviy tvftslygnc imqedesyll qvlryliefe lkesdnprrl lrrgtcafsi
      181 lfklfseglf saklfltatl hepimqllve dedhletdpn klierfspaq qeklfgekgs
      241 drfrqkvqem vdsneaklva lvnkfigylk qntycfphsl rwivsqmykt lscvdrlevg
      301 evramctdll lacficpavv npeqygiisd apinevarfn lmqvgrllqq lamtgseegd
      361 prtksslgkf dkscvaafld vviggravet ppmssvnlle glsrtvvyit ysqlitlvnf
      421 mksvmsgdql redrmaldnl lanlpqakpg kssslemtpy ntpqlspatt pankknrlpi
      481 atrsrsrtnv lmdlhmdheg saqetiqevq peevlvislg tgpqltpgmm senevlnmql
      541 sdggqgdvpv denklhgkpd ktlrfslcsd nlegisegps nrsnsvssld legesvselg
      601 agpsgsngve alqlleheqa ttqdnlddkl rkfeirdmmg ltddrdiset vsetwstdvl
      661 gsdfdpnide drlqeiagaa aenvlgsllc lpgsgsvlld pctgstiset tseawsvevl
      721 psdseapdlk qeerlqeles csglgstsdd tdvrea
//
LOCUS       XP_061010645             655 aa            linear   MAM 02-DEC-2023
DEFINITION  endoplasmic reticulum chaperone BiP [Dama dama].
ACCESSION   XP_061010645
VERSION     XP_061010645.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154662.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..655
                     /product="endoplasmic reticulum chaperone BiP"
                     /calculated_mol_wt=72296
     Region          31..636
                     /region_name="HSP70"
                     /note="Hsp70 protein; pfam00012"
                     /db_xref="CDD:394970"
     CDS             1..655
                     /gene="HSPA5"
                     /coded_by="XM_061154662.1:165..2132"
                     /db_xref="GeneID:133064481"
ORIGIN      
        1 mklslvaavl llllgtarae eedkkedvgt vvgidlgtty scvgvfkngr veiiandqgn
       61 ritpsyvaft pegerligda aknqltsnpe ntvfdakrli grtwndpsvq qdikflpfkv
      121 vekktkpyiq vdvgggqtkt fapeeisamv ltkmketaea ylgkkvthav vtvpayfnda
      181 qrqatkdagt iaglnvmrii neptaaaiay gldkregekn ilvfdlgggt fdvslltidn
      241 gvfevvatng dthlggedfd qrvmehfikl ykkktgkdvr kdnravqklr revekakral
      301 ssqhqariei esfyegedfs etltrakfee lnmdlfrstm kpvqkvleds dlkksdidei
      361 vlvggstrip kiqqlvkeff ngkepsrgin pdeavaygaa vqagvlsgdq dtgdlvlldv
      421 cpltlgietv ggvmtklipr ntvvptkksq ifstasdnqp tvtikvyege rpltkdnhll
      481 gtfdltgipp aprgvpqiev tfeidvngil rvtaedkgtg nknkititnd qnrltpeeie
      541 rmvndaekfa eedkklkeri dtrnelesya yslknqigdk eklggklsse dketmekave
      601 ekiewleshq dadiedfkak kkeleeivqp iisklygsag ppptneeeag ekdel
//
LOCUS       XP_061010646             655 aa            linear   MAM 02-DEC-2023
DEFINITION  endoplasmic reticulum chaperone BiP [Dama dama].
ACCESSION   XP_061010646
VERSION     XP_061010646.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154663.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..655
                     /product="endoplasmic reticulum chaperone BiP"
                     /calculated_mol_wt=72296
     Region          31..636
                     /region_name="HSP70"
                     /note="Hsp70 protein; pfam00012"
                     /db_xref="CDD:394970"
     CDS             1..655
                     /gene="HSPA5"
                     /coded_by="XM_061154663.1:197..2164"
                     /db_xref="GeneID:133064481"
ORIGIN      
        1 mklslvaavl llllgtarae eedkkedvgt vvgidlgtty scvgvfkngr veiiandqgn
       61 ritpsyvaft pegerligda aknqltsnpe ntvfdakrli grtwndpsvq qdikflpfkv
      121 vekktkpyiq vdvgggqtkt fapeeisamv ltkmketaea ylgkkvthav vtvpayfnda
      181 qrqatkdagt iaglnvmrii neptaaaiay gldkregekn ilvfdlgggt fdvslltidn
      241 gvfevvatng dthlggedfd qrvmehfikl ykkktgkdvr kdnravqklr revekakral
      301 ssqhqariei esfyegedfs etltrakfee lnmdlfrstm kpvqkvleds dlkksdidei
      361 vlvggstrip kiqqlvkeff ngkepsrgin pdeavaygaa vqagvlsgdq dtgdlvlldv
      421 cpltlgietv ggvmtklipr ntvvptkksq ifstasdnqp tvtikvyege rpltkdnhll
      481 gtfdltgipp aprgvpqiev tfeidvngil rvtaedkgtg nknkititnd qnrltpeeie
      541 rmvndaekfa eedkklkeri dtrnelesya yslknqigdk eklggklsse dketmekave
      601 ekiewleshq dadiedfkak kkeleeivqp iisklygsag ppptneeeag ekdel
//
LOCUS       XP_061010647             372 aa            linear   MAM 02-DEC-2023
DEFINITION  rab9 effector protein with kelch motifs isoform X1 [Dama dama].
ACCESSION   XP_061010647
VERSION     XP_061010647.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154664.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..372
                     /product="rab9 effector protein with kelch motifs isoform
                     X1"
                     /calculated_mol_wt=39947
     Region          13..266
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          31..82
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          86..135
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          139..189
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          193..240
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          243..283
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..372
                     /gene="RABEPK"
                     /coded_by="XM_061154664.1:58..1176"
                     /db_xref="GeneID:133064482"
ORIGIN      
        1 mkqlpvlepg dkpkketwyt ltpvgdspca rvghscsylp pvgdaergmv fivggadpnr
       61 sfsdvhtidl gthqwglats ksllpryeha sfipsstphs iwvfggadqs gnrnclqvln
      121 pdtrtwttpe vtgpppsprt fhtssaaigd qlyvfggger gaqpvqdmel hvfdantltw
      181 sqpethgkpp sprhghvmva agtklfihgg lagdnfygdl hcidisdmkw qkltptgaap
      241 tgcaahsava vgkhvyvfgg mtptgalntm yqyhiekqhw tllkfdnspp agrldhsmci
      301 ipwpgtctse kedsnsatln cdaekgdste kgvtqggdsh eesqadtllc fvfggmnteg
      361 eiyddcivta vd
//
LOCUS       XP_061010648             334 aa            linear   MAM 02-DEC-2023
DEFINITION  rab9 effector protein with kelch motifs isoform X2 [Dama dama].
ACCESSION   XP_061010648
VERSION     XP_061010648.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154665.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..334
                     /product="rab9 effector protein with kelch motifs isoform
                     X2"
                     /calculated_mol_wt=36091
     Region          47..>255
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          48..97
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          101..151
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          155..202
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          205..245
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..334
                     /gene="RABEPK"
                     /coded_by="XM_061154665.1:58..1062"
                     /db_xref="GeneID:133064482"
ORIGIN      
        1 mkqlpvlepg dkpkketwsv hpdpswrqpl ctgthqwgla tsksllprye hasfipsstp
       61 hsiwvfggad qsgnrnclqv lnpdtrtwtt pevtgpppsp rtfhtssaai gdqlyvfggg
      121 ergaqpvqdm elhvfdantl twsqpethgk ppsprhghvm vaagtklfih gglagdnfyg
      181 dlhcidisdm kwqkltptga aptgcaahsa vavgkhvyvf ggmtptgaln tmyqyhiekq
      241 hwtllkfdns ppagrldhsm ciipwpgtct sekedsnsat lncdaekgds tekgvtqggd
      301 sheesqadtl lcfvfggmnt egeiyddciv tavd
//
LOCUS       XP_061010649             324 aa            linear   MAM 02-DEC-2023
DEFINITION  rab9 effector protein with kelch motifs isoform X3 [Dama dama].
ACCESSION   XP_061010649
VERSION     XP_061010649.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154666.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..324
                     /product="rab9 effector protein with kelch motifs isoform
                     X3"
                     /calculated_mol_wt=34753
     Region          37..>245
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          38..87
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          91..141
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          145..192
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          195..235
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..324
                     /gene="RABEPK"
                     /coded_by="XM_061154666.1:185..1159"
                     /db_xref="GeneID:133064482"
ORIGIN      
        1 mvfivggadp nrsfsdvhti dlgthqwgla tsksllprye hasfipsstp hsiwvfggad
       61 qsgnrnclqv lnpdtrtwtt pevtgpppsp rtfhtssaai gdqlyvfggg ergaqpvqdm
      121 elhvfdantl twsqpethgk ppsprhghvm vaagtklfih gglagdnfyg dlhcidisdm
      181 kwqkltptga aptgcaahsa vavgkhvyvf ggmtptgaln tmyqyhiekq hwtllkfdns
      241 ppagrldhsm ciipwpgtct sekedsnsat lncdaekgds tekgvtqggd sheesqadtl
      301 lcfvfggmnt egeiyddciv tavd
//
LOCUS       XP_061010650             316 aa            linear   MAM 02-DEC-2023
DEFINITION  rab9 effector protein with kelch motifs isoform X4 [Dama dama].
ACCESSION   XP_061010650
VERSION     XP_061010650.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154667.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..316
                     /product="rab9 effector protein with kelch motifs isoform
                     X4"
                     /calculated_mol_wt=34029
     Region          29..>237
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          30..79
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          83..133
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          137..184
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          187..227
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..316
                     /gene="RABEPK"
                     /coded_by="XM_061154667.1:86..1036"
                     /db_xref="GeneID:133064482"
ORIGIN      
        1 mvhpdpswrq plctgthqwg latsksllpr yehasfipss tphsiwvfgg adqsgnrncl
       61 qvlnpdtrtw ttpevtgppp sprtfhtssa aigdqlyvfg ggergaqpvq dmelhvfdan
      121 tltwsqpeth gkppsprhgh vmvaagtklf ihgglagdnf ygdlhcidis dmkwqkltpt
      181 gaaptgcaah savavgkhvy vfggmtptga lntmyqyhie kqhwtllkfd nsppagrldh
      241 smciipwpgt ctsekedsns atlncdaekg dstekgvtqg gdsheesqad tllcfvfggm
      301 ntegeiyddc ivtavd
//
LOCUS       XP_061010651             305 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein phosphatase 6 catalytic subunit [Dama
            dama].
ACCESSION   XP_061010651
VERSION     XP_061010651.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154668.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..305
                     /product="serine/threonine-protein phosphatase 6 catalytic
                     subunit"
                     /calculated_mol_wt=35013
     Region          5..289
                     /region_name="MPP_PP2A_PP4_PP6"
                     /note="PP2A, PP4, and PP6 phosphoprotein phosphatases,
                     metallophosphatase domain; cd07415"
                     /db_xref="CDD:277360"
     Site            order(47,63,66..67,69..70,72,74..75,87,102..106,117..118,
                     121..122,126..127,130..131,139,264,273,283,289)
                     /site_type="other"
                     /note="heterotrimer interface [polypeptide binding]"
                     /db_xref="CDD:277360"
     Site            order(53,55,81,85,113..114,118..119,123,163,185..187,196,
                     209..211,237,239,263..265)
                     /site_type="active"
                     /db_xref="CDD:277360"
     Site            order(53,55,81,113,163,237)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277360"
     CDS             1..305
                     /gene="PPP6C"
                     /coded_by="XM_061154668.1:96..1013"
                     /db_xref="GeneID:133064483"
ORIGIN      
        1 mapldldkyv eiarlckylp endlkrlcdy vcdllleesn vqpvstpvtv cgdihgqfyd
       61 lcelfrtggq vpdtnyifmg dfvdrgyysl etftyllalk akwpdritll rgnhesrqit
      121 qvygfydecq tkygnanawr yctkvfdmlt vaalideqil cvhgglspdi ktldqirtie
      181 rnqeiphkga fcdlvwsdpe dvdtwaispr gagwlfgakv tnefvhinnl klicrahqlv
      241 hegykfmfde klvtvwsapn ycyrcgnias imvfkdvntr epklfravpd servipprtt
      301 tpyfl
//
LOCUS       XP_061010652             606 aa            linear   MAM 02-DEC-2023
DEFINITION  protein SCAI isoform X1 [Dama dama].
ACCESSION   XP_061010652
VERSION     XP_061010652.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154669.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..606
                     /product="protein SCAI isoform X1"
                     /calculated_mol_wt=70207
     Region          64..557
                     /region_name="SCAI"
                     /note="Protein SCAI; pfam12070"
                     /db_xref="CDD:463455"
     CDS             1..606
                     /gene="SCAI"
                     /coded_by="XM_061154669.1:113..1933"
                     /db_xref="GeneID:133064484"
ORIGIN      
        1 mvrgarqpqq prsrlaprlt gtvekpprkr ksrtefalke imssggaedd ipqgerktvt
       61 dfcylldksk qlfnglrdlp qygqkqwqsy fgrtfdvytk lwkfqqqhrq vldnryglkr
      121 wqigeiaski gqlyyhyylr tsetsylnea fsfysairqr syysqvnked rpelvvkklr
      181 yyarfivvcl llnkmdvvkd lvkelsdeie dythrfnted qvewnlvlqe vaafieadpv
      241 mvlnddntiv itsnrlaetg aplleqgmiv gqlsladali igncnnqvkf seltvdmfrm
      301 lqalerepmn lasqmnkpgm qesadkptrr enphkyllyk ptfsqlytfl aasfkelpan
      361 svlliylsat gvfptgrsds egpydfggvl tnsnrdiing daihkrnqsh kemhclhpgd
      421 lypftrkplf iivdssnsva yknftnlfgq plvcllspta ypkalqdqsq rgslftlfln
      481 nplmaflfvs glssmrrglw ekcqeylrki nrdiaqllth srsidqaflq ffgdeflrll
      541 ltrfifcsat mrmhkifret rnypesypql prdetvenph lqkhilelas ildvrnvfle
      601 ntiddy
//
LOCUS       XP_061010653             565 aa            linear   MAM 02-DEC-2023
DEFINITION  protein SCAI isoform X2 [Dama dama].
ACCESSION   XP_061010653
VERSION     XP_061010653.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154670.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..565
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..565
                     /product="protein SCAI isoform X2"
                     /calculated_mol_wt=65453
     Region          23..516
                     /region_name="SCAI"
                     /note="Protein SCAI; pfam12070"
                     /db_xref="CDD:463455"
     CDS             1..565
                     /gene="SCAI"
                     /coded_by="XM_061154670.1:86..1783"
                     /db_xref="GeneID:133064484"
ORIGIN      
        1 mssggaeddi pqgerktvtd fcylldkskq lfnglrdlpq ygqkqwqsyf grtfdvytkl
       61 wkfqqqhrqv ldnryglkrw qigeiaskig qlyyhyylrt setsylneaf sfysairqrs
      121 yysqvnkedr pelvvkklry yarfivvcll lnkmdvvkdl vkelsdeied ythrfntedq
      181 vewnlvlqev aafieadpvm vlnddntivi tsnrlaetga plleqgmivg qlsladalii
      241 gncnnqvkfs eltvdmfrml qalerepmnl asqmnkpgmq esadkptrre nphkyllykp
      301 tfsqlytfla asfkelpans vlliylsatg vfptgrsdse gpydfggvlt nsnrdiingd
      361 aihkrnqshk emhclhpgdl ypftrkplfi ivdssnsvay knftnlfgqp lvcllsptay
      421 pkalqdqsqr gslftlflnn plmaflfvsg lssmrrglwe kcqeylrkin rdiaqllths
      481 rsidqaflqf fgdeflrlll trfifcsatm rmhkifretr nypesypqlp rdetvenphl
      541 qkhilelasi ldvrnvflen tiddy
//
LOCUS       XP_061010654             562 aa            linear   MAM 02-DEC-2023
DEFINITION  protein SCAI isoform X3 [Dama dama].
ACCESSION   XP_061010654
VERSION     XP_061010654.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154671.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..562
                     /product="protein SCAI isoform X3"
                     /calculated_mol_wt=65272
     Region          23..513
                     /region_name="SCAI"
                     /note="Protein SCAI; pfam12070"
                     /db_xref="CDD:463455"
     CDS             1..562
                     /gene="SCAI"
                     /coded_by="XM_061154671.1:113..1801"
                     /db_xref="GeneID:133064484"
ORIGIN      
        1 mvrgarqpqq prsrlaprlt gtvekpprkr ksrdlpqygq kqwqsyfgrt fdvytklwkf
       61 qqqhrqvldn ryglkrwqig eiaskigqly yhyylrtset sylneafsfy sairqrsyys
      121 qvnkedrpel vvkklryyar fivvclllnk mdvvkdlvke lsdeiedyth rfntedqvew
      181 nlvlqevaaf ieadpvmvln ddntivitsn rlaetgapll eqgmivgqls ladaliignc
      241 nnqvkfselt vdmfrmlqal erepmnlasq mnkpgmqesa dkptrrenph kyllykptfs
      301 qlytflaasf kelpansvll iylsatgvfp tgrsdsegpy dfggvltnsn rdiingdaih
      361 krnqshkemh clhpgdlypf trkplfiivd ssnsvayknf tnlfgqplvc llsptaypka
      421 lqdqsqrgsl ftlflnnplm aflfvsglss mrrglwekcq eylrkinrdi aqllthsrsi
      481 dqaflqffgd eflrllltrf ifcsatmrmh kifretrnyp esypqlprde tvenphlqkh
      541 ilelasildv rnvflentid dy
//
LOCUS       XP_061010655             768 aa            linear   MAM 02-DEC-2023
DEFINITION  golgin subfamily A member 1 [Dama dama].
ACCESSION   XP_061010655
VERSION     XP_061010655.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154672.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..768
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..768
                     /product="golgin subfamily A member 1"
                     /calculated_mol_wt=87812
     Region          <50..365
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <224..>541
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          <428..>670
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
     Region          693..738
                     /region_name="Grip"
                     /note="golgin-97, RanBP2alpha,Imh1p and p230/golgin-245;
                     smart00755"
                     /db_xref="CDD:197860"
     CDS             1..768
                     /gene="GOLGA1"
                     /coded_by="XM_061154672.1:416..2722"
                     /db_xref="GeneID:133064486"
ORIGIN      
        1 mfaklkkkia eetavtqrpg gatriprsvs kesvasmgad sgddfasdgs ssredlssql
       61 lrrneqirkl earlsdyaeq vrtlqkikek leialekhqd ssmrkfqeqn etfqanrakm
      121 aeglalalar kdqewsekvd qlekdkrflt aqlqemknqs lnlfqrrdem delegfqqqe
      181 lskvkhmllk keeilgkmeq eleartrels rtreelvtss qisldlsqkl eelqrhysal
      241 eeqrdrvtas ktgaenkitv leqkeqelqa fiqqlsidlq kvtaetqeke klithlqekv
      301 aslekrleqn lsgeehvqel lkektlaeqn ledtrqqlla arssqakain nletrvkele
      361 qslqaseekl kqssdvvaaq eaqirelata ntesgraqqq vlareeqyte rihvleaqla
      421 glgrarvael kateqelrkl eqenaalkes knececslqh hqlelkklke ewsqreivsv
      481 amaqaleevr kqreelqqqa adltamvgek eqslqekmev ilqkeqeilq lkkghdsall
      541 qthqlqsele alrglraeea eaaasredll rltgqeqpmv lsaskprvts ragqdpeyql
      601 pavegipnge mgaamdlgql qkekqdleqq lleknktikq mqqrmlelkk tlqkelkirp
      661 dnelfevrek pgpemsnmap svtnnadltd areinfeylk hvvlkfmscr eseafhlika
      721 vsvllnfsqe eenmlketle ykmswfgskp apkgsirpsi snprtpws
//
LOCUS       XP_061010656             768 aa            linear   MAM 02-DEC-2023
DEFINITION  golgin subfamily A member 1 [Dama dama].
ACCESSION   XP_061010656
VERSION     XP_061010656.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154673.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..768
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..768
                     /product="golgin subfamily A member 1"
                     /calculated_mol_wt=87812
     Region          <50..365
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <224..>541
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          <428..>670
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
     Region          693..738
                     /region_name="Grip"
                     /note="golgin-97, RanBP2alpha,Imh1p and p230/golgin-245;
                     smart00755"
                     /db_xref="CDD:197860"
     CDS             1..768
                     /gene="GOLGA1"
                     /coded_by="XM_061154673.1:544..2850"
                     /db_xref="GeneID:133064486"
ORIGIN      
        1 mfaklkkkia eetavtqrpg gatriprsvs kesvasmgad sgddfasdgs ssredlssql
       61 lrrneqirkl earlsdyaeq vrtlqkikek leialekhqd ssmrkfqeqn etfqanrakm
      121 aeglalalar kdqewsekvd qlekdkrflt aqlqemknqs lnlfqrrdem delegfqqqe
      181 lskvkhmllk keeilgkmeq eleartrels rtreelvtss qisldlsqkl eelqrhysal
      241 eeqrdrvtas ktgaenkitv leqkeqelqa fiqqlsidlq kvtaetqeke klithlqekv
      301 aslekrleqn lsgeehvqel lkektlaeqn ledtrqqlla arssqakain nletrvkele
      361 qslqaseekl kqssdvvaaq eaqirelata ntesgraqqq vlareeqyte rihvleaqla
      421 glgrarvael kateqelrkl eqenaalkes knececslqh hqlelkklke ewsqreivsv
      481 amaqaleevr kqreelqqqa adltamvgek eqslqekmev ilqkeqeilq lkkghdsall
      541 qthqlqsele alrglraeea eaaasredll rltgqeqpmv lsaskprvts ragqdpeyql
      601 pavegipnge mgaamdlgql qkekqdleqq lleknktikq mqqrmlelkk tlqkelkirp
      661 dnelfevrek pgpemsnmap svtnnadltd areinfeylk hvvlkfmscr eseafhlika
      721 vsvllnfsqe eenmlketle ykmswfgskp apkgsirpsi snprtpws
//
LOCUS       XP_061010657             768 aa            linear   MAM 02-DEC-2023
DEFINITION  golgin subfamily A member 1 [Dama dama].
ACCESSION   XP_061010657
VERSION     XP_061010657.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154674.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..768
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..768
                     /product="golgin subfamily A member 1"
                     /calculated_mol_wt=87812
     Region          <50..365
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <224..>541
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          <428..>670
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
     Region          693..738
                     /region_name="Grip"
                     /note="golgin-97, RanBP2alpha,Imh1p and p230/golgin-245;
                     smart00755"
                     /db_xref="CDD:197860"
     CDS             1..768
                     /gene="GOLGA1"
                     /coded_by="XM_061154674.1:576..2882"
                     /db_xref="GeneID:133064486"
ORIGIN      
        1 mfaklkkkia eetavtqrpg gatriprsvs kesvasmgad sgddfasdgs ssredlssql
       61 lrrneqirkl earlsdyaeq vrtlqkikek leialekhqd ssmrkfqeqn etfqanrakm
      121 aeglalalar kdqewsekvd qlekdkrflt aqlqemknqs lnlfqrrdem delegfqqqe
      181 lskvkhmllk keeilgkmeq eleartrels rtreelvtss qisldlsqkl eelqrhysal
      241 eeqrdrvtas ktgaenkitv leqkeqelqa fiqqlsidlq kvtaetqeke klithlqekv
      301 aslekrleqn lsgeehvqel lkektlaeqn ledtrqqlla arssqakain nletrvkele
      361 qslqaseekl kqssdvvaaq eaqirelata ntesgraqqq vlareeqyte rihvleaqla
      421 glgrarvael kateqelrkl eqenaalkes knececslqh hqlelkklke ewsqreivsv
      481 amaqaleevr kqreelqqqa adltamvgek eqslqekmev ilqkeqeilq lkkghdsall
      541 qthqlqsele alrglraeea eaaasredll rltgqeqpmv lsaskprvts ragqdpeyql
      601 pavegipnge mgaamdlgql qkekqdleqq lleknktikq mqqrmlelkk tlqkelkirp
      661 dnelfevrek pgpemsnmap svtnnadltd areinfeylk hvvlkfmscr eseafhlika
      721 vsvllnfsqe eenmlketle ykmswfgskp apkgsirpsi snprtpws
//
LOCUS       XP_061010658             768 aa            linear   MAM 02-DEC-2023
DEFINITION  golgin subfamily A member 1 [Dama dama].
ACCESSION   XP_061010658
VERSION     XP_061010658.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154675.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..768
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..768
                     /product="golgin subfamily A member 1"
                     /calculated_mol_wt=87812
     Region          <50..365
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <224..>541
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          <428..>670
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
     Region          693..738
                     /region_name="Grip"
                     /note="golgin-97, RanBP2alpha,Imh1p and p230/golgin-245;
                     smart00755"
                     /db_xref="CDD:197860"
     CDS             1..768
                     /gene="GOLGA1"
                     /coded_by="XM_061154675.1:341..2647"
                     /db_xref="GeneID:133064486"
ORIGIN      
        1 mfaklkkkia eetavtqrpg gatriprsvs kesvasmgad sgddfasdgs ssredlssql
       61 lrrneqirkl earlsdyaeq vrtlqkikek leialekhqd ssmrkfqeqn etfqanrakm
      121 aeglalalar kdqewsekvd qlekdkrflt aqlqemknqs lnlfqrrdem delegfqqqe
      181 lskvkhmllk keeilgkmeq eleartrels rtreelvtss qisldlsqkl eelqrhysal
      241 eeqrdrvtas ktgaenkitv leqkeqelqa fiqqlsidlq kvtaetqeke klithlqekv
      301 aslekrleqn lsgeehvqel lkektlaeqn ledtrqqlla arssqakain nletrvkele
      361 qslqaseekl kqssdvvaaq eaqirelata ntesgraqqq vlareeqyte rihvleaqla
      421 glgrarvael kateqelrkl eqenaalkes knececslqh hqlelkklke ewsqreivsv
      481 amaqaleevr kqreelqqqa adltamvgek eqslqekmev ilqkeqeilq lkkghdsall
      541 qthqlqsele alrglraeea eaaasredll rltgqeqpmv lsaskprvts ragqdpeyql
      601 pavegipnge mgaamdlgql qkekqdleqq lleknktikq mqqrmlelkk tlqkelkirp
      661 dnelfevrek pgpemsnmap svtnnadltd areinfeylk hvvlkfmscr eseafhlika
      721 vsvllnfsqe eenmlketle ykmswfgskp apkgsirpsi snprtpws
//
LOCUS       XP_061010659             296 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 38 isoform X1 [Dama dama].
ACCESSION   XP_061010659
VERSION     XP_061010659.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154676.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..296
                     /product="WD repeat-containing protein 38 isoform X1"
                     /calculated_mol_wt=32350
     Region          <13..296
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          26..61
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          67..103
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          108..144
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          151..189
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          195..230
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          236..276
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..296
                     /gene="WDR38"
                     /coded_by="XM_061154676.1:1..891"
                     /db_xref="GeneID:133064487"
ORIGIN      
        1 mnsgprgkla vgrvkffgrh rgevnssafs pdgqrlltas edgcvygwet qsgrllwrlg
       61 ghkgpvrfcr fspdgrlfas tscdrtvrlw datdakclqv lkghqrsvet vsfshdskql
      121 asggwdkrvm lwevqsgqvl rhfvghrdsv qssdfapssd clatgswdst irmwdlrags
      181 pgifhqkleg hrgnisclcy spsgllasgs wdktihiwkp strsvliqlk ghitwvksia
      241 fspdgqqlas agyshmvkvw dcntgkctet lkgvlnvaha cafmpdgkll vsgavd
//
LOCUS       XP_061010660             285 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 38 isoform X2 [Dama dama].
ACCESSION   XP_061010660
VERSION     XP_061010660.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154677.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..285
                     /product="WD repeat-containing protein 38 isoform X2"
                     /calculated_mol_wt=31260
     Region          11..50
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <22..285
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          56..92
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          97..133
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          140..178
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          184..219
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          225..265
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..285
                     /gene="WDR38"
                     /coded_by="XM_061154677.1:1..858"
                     /db_xref="GeneID:133064487"
ORIGIN      
        1 mnsgprgkla vgrvkffgrh rgerlltase dgcvygwetq sgrllwrlgg hkgpvrfcrf
       61 spdgrlfast scdrtvrlwd atdakclqvl kghqrsvetv sfshdskqla sggwdkrvml
      121 wevqsgqvlr hfvghrdsvq ssdfapssdc latgswdsti rmwdlragsp gifhqklegh
      181 rgnisclcys psgllasgsw dktihiwkps trsvliqlkg hitwvksiaf spdgqqlasa
      241 gyshmvkvwd cntgkctetl kgvlnvahac afmpdgkllv sgavd
//
LOCUS       XP_061010661             153 aa            linear   MAM 02-DEC-2023
DEFINITION  actin-related protein 2/3 complex subunit 5-like protein [Dama
            dama].
ACCESSION   XP_061010661
VERSION     XP_061010661.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154678.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..153
                     /product="actin-related protein 2/3 complex subunit 5-like
                     protein"
                     /calculated_mol_wt=16810
     Region          9..151
                     /region_name="P16-Arc"
                     /note="ARP2/3 complex 16 kDa subunit (p16-Arc); pfam04699"
                     /db_xref="CDD:461399"
     CDS             1..153
                     /gene="ARPC5L"
                     /coded_by="XM_061154678.1:144..605"
                     /db_xref="GeneID:133064488"
ORIGIN      
        1 marntlssrf rrvdidefde nkfvdeqeea aaaagepgpd psevdgllrq gdmlrafhaa
       61 lrnspvntkn qavkeraqgv vlkvltnfks seieqavqsl drngidllmk yiykgfekpt
      121 enssavllqw hekalavggl gsiirvltar ktv
//
LOCUS       XP_061010662             123 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein uL29 [Dama dama].
ACCESSION   XP_061010662
VERSION     XP_061010662.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154679.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..123
                     /product="large ribosomal subunit protein uL29"
                     /calculated_mol_wt=14434
     Region          8..63
                     /region_name="Ribosomal_L29"
                     /note="Ribosomal L29 protein; pfam00831"
                     /db_xref="CDD:459954"
     CDS             1..123
                     /gene="RPL35"
                     /coded_by="XM_061154679.1:142..513"
                     /db_xref="GeneID:133064489"
ORIGIN      
        1 makikardlr gkkkeellkq ledlkvelsq lrvakvtgga asklskirvv rksiarvltv
       61 inqtqkenlr kfykgkkykp ldlrpkktra mrrrlnkhee nlktkkqqrk erlyplrkya
      121 vka
//
LOCUS       XP_061010663             652 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactomedin-like protein 2A [Dama dama].
ACCESSION   XP_061010663
VERSION     XP_061010663.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154680.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..652
                     /product="olfactomedin-like protein 2A"
                     /calculated_mol_wt=73135
     Region          399..650
                     /region_name="OLF"
                     /note="Olfactomedin-like domain; pfam02191"
                     /db_xref="CDD:460482"
     CDS             1..652
                     /gene="OLFML2A"
                     /coded_by="XM_061154680.1:70..2028"
                     /db_xref="GeneID:133064490"
ORIGIN      
        1 maaaalptrp gsrpgprplp llllplllll rvgplradsk vfgdvdqvrm tsegsdcrck
       61 cimrplskda csrvrsgrar vedfytvetv ssgtdcrcsc tappsslnpc enewkmeklk
      121 kqapellklq smvdllegtl ysmdlmkvha yvhkvasqmn tleesikanl srenevvres
      181 mrhfseqlkh yenhsaimms ikkelsslgl qllqkdaata paaapapgag skaqdtaggk
      241 gkdnnkygsv qksfvdkgls kppkekllkv erlkkegkgr fpqptakpra laqqqavirg
      301 ityykagrkd tteamadnal kgtswmeqlp prvegrppep nsaeredaap qapegadlap
      361 gtpasdptpt pttrplltep pprpevpsrs reascegtlr avdppvrhhs ygrhegawmk
      421 dpaarddriy vtnyyygnsl vefrnlenfk qgrwsnmykl pynwigtghv vyqgafyynr
      481 aftkniikyd lrqrfvaswa llpdvvyedt tpwkwrghsd idfavdesgl wviypavddr
      541 deaqsevivl srldpgdlsv qrettwktrl rrnsygncfl vcgilyavdt ynqreghvay
      601 afdthtgtda rlqlpflneh ayttqidynp kervlyawdn ghqltytlhf vv
//
LOCUS       XP_061010664             480 aa            linear   MAM 02-DEC-2023
DEFINITION  nuclear receptor subfamily 6 group A member 1 isoform X1 [Dama
            dama].
ACCESSION   XP_061010664
VERSION     XP_061010664.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154681.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..480
                     /product="nuclear receptor subfamily 6 group A member 1
                     isoform X1"
                     /calculated_mol_wt=54264
     Region          52..141
                     /region_name="NR_DBD_GCNF_like"
                     /note="DNA-binding domain of Germ cell nuclear factor
                     (GCNF) F1 is composed of two C4-type zinc fingers;
                     cd07169"
                     /db_xref="CDD:143543"
     Site            order(60,63,77,80,96,102,112,115)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143543"
     Site            order(70..72,78..79,81,83,86,89,109..110,113,116,127,130)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143543"
     Region          256..467
                     /region_name="NR_LBD_DHR4_like"
                     /note="The ligand binding domain of orphan nuclear
                     receptor Ecdysone-induced receptor DHR4; cd06953"
                     /db_xref="CDD:132751"
     Site            order(286..287,291,325,329,332,346,369)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:132751"
     Site            order(296,299,303,308,313..314,316..317,320..321)
                     /site_type="active"
                     /note="putative coactivator recognition site [active]"
                     /db_xref="CDD:132751"
     CDS             1..480
                     /gene="NR6A1"
                     /coded_by="XM_061154681.1:95..1537"
                     /db_xref="GeneID:133064492"
ORIGIN      
        1 merderppsg ggggggsagf leppaalppp prngfcqdel aeldsstisv pddraeqrtc
       61 licgdratgl hygiiscegc kgffkrsicn krvyrcsrdk ncvmsrkqrn rcqycrllkc
      121 lqmgmnrkai redgmpggrn ksigpvqise eeierimsgq efeeeanhws nhgdsdhssp
      181 gnrasesnqp spgstlsssr svelngfvaf rdqymgmsvp phyqyiphlf sysahspllp
      241 pqarsldpqs yslihqlvsa edleplgtpm liedgyavtq aelfallcrl adellfrqia
      301 wikklpffce lsikdytcll sstwqelill ssltvyskqi fgeladvtak yspsdeelhr
      361 fsdegmevie rliylyhkfh qlkvsneeya cmkainflnq dirgltsasq leqlnkrywy
      421 icqdfteyky thqpnrfpdl mmclpeiryi agkmvnvple qlpllfkvvl hscktsvgke
//
LOCUS       XP_061010665             479 aa            linear   MAM 02-DEC-2023
DEFINITION  nuclear receptor subfamily 6 group A member 1 isoform X2 [Dama
            dama].
ACCESSION   XP_061010665
VERSION     XP_061010665.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154682.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..479
                     /product="nuclear receptor subfamily 6 group A member 1
                     isoform X2"
                     /calculated_mol_wt=54177
     Region          52..141
                     /region_name="NR_DBD_GCNF_like"
                     /note="DNA-binding domain of Germ cell nuclear factor
                     (GCNF) F1 is composed of two C4-type zinc fingers;
                     cd07169"
                     /db_xref="CDD:143543"
     Site            order(60,63,77,80,96,102,112,115)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143543"
     Site            order(70..72,78..79,81,83,86,89,109..110,113,116,127,130)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143543"
     Region          255..466
                     /region_name="NR_LBD_DHR4_like"
                     /note="The ligand binding domain of orphan nuclear
                     receptor Ecdysone-induced receptor DHR4; cd06953"
                     /db_xref="CDD:132751"
     Site            order(285..286,290,324,328,331,345,368)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:132751"
     Site            order(295,298,302,307,312..313,315..316,319..320)
                     /site_type="active"
                     /note="putative coactivator recognition site [active]"
                     /db_xref="CDD:132751"
     CDS             1..479
                     /gene="NR6A1"
                     /coded_by="XM_061154682.1:94..1533"
                     /db_xref="GeneID:133064492"
ORIGIN      
        1 merderppsg ggggggsagf leppaalppp prngfcqdel aeldsstisv pddraeqrtc
       61 licgdratgl hygiiscegc kgffkrsicn krvyrcsrdk ncvmsrkqrn rcqycrllkc
      121 lqmgmnrkai redgmpggrn ksigpvqise eeierimsgq efeeeanhws nhgdsdhssp
      181 gnrasesnqp spgstlssrs velngfvafr dqymgmsvpp hyqyiphlfs ysahspllpp
      241 qarsldpqsy slihqlvsae dleplgtpml iedgyavtqa elfallcrla dellfrqiaw
      301 ikklpffcel sikdytclls stwqelills sltvyskqif geladvtaky spsdeelhrf
      361 sdegmevier liylyhkfhq lkvsneeyac mkainflnqd irgltsasql eqlnkrywyi
      421 cqdfteykyt hqpnrfpdlm mclpeiryia gkmvnvpleq lpllfkvvlh scktsvgke
//
LOCUS       XP_061010666             438 aa            linear   MAM 02-DEC-2023
DEFINITION  nuclear receptor subfamily 6 group A member 1 isoform X3 [Dama
            dama].
ACCESSION   XP_061010666
VERSION     XP_061010666.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154683.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..438
                     /product="nuclear receptor subfamily 6 group A member 1
                     isoform X3"
                     /calculated_mol_wt=50220
     Region          10..99
                     /region_name="NR_DBD_GCNF_like"
                     /note="DNA-binding domain of Germ cell nuclear factor
                     (GCNF) F1 is composed of two C4-type zinc fingers;
                     cd07169"
                     /db_xref="CDD:143543"
     Site            order(18,21,35,38,54,60,70,73)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143543"
     Site            order(28..30,36..37,39,41,44,47,67..68,71,74,85,88)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143543"
     Region          214..425
                     /region_name="NR_LBD_DHR4_like"
                     /note="The ligand binding domain of orphan nuclear
                     receptor Ecdysone-induced receptor DHR4; cd06953"
                     /db_xref="CDD:132751"
     Site            order(244..245,249,283,287,290,304,327)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:132751"
     Site            order(254,257,261,266,271..272,274..275,278..279)
                     /site_type="active"
                     /note="putative coactivator recognition site [active]"
                     /db_xref="CDD:132751"
     CDS             1..438
                     /gene="NR6A1"
                     /coded_by="XM_061154683.1:145..1461"
                     /db_xref="GeneID:133064492"
ORIGIN      
        1 metwevsvpd draeqrtcli cgdratglhy giiscegckg ffkrsicnkr vyrcsrdknc
       61 vmsrkqrnrc qycrllkclq mgmnrkaire dgmpggrnks igpvqiseee ierimsgqef
      121 eeeanhwsnh gdsdhsspgn rasesnqpsp gstlsssrsv elngfvafrd qymgmsvpph
      181 yqyiphlfsy sahspllppq arsldpqsys lihqlvsaed leplgtpmli edgyavtqae
      241 lfallcrlad ellfrqiawi kklpffcels ikdytcllss twqelillss ltvyskqifg
      301 eladvtakys psdeelhrfs degmevierl iylyhkfhql kvsneeyacm kainflnqdi
      361 rgltsasqle qlnkrywyic qdfteykyth qpnrfpdlmm clpeiryiag kmvnvpleql
      421 pllfkvvlhs cktsvgke
//
LOCUS       XP_061010667             461 aa            linear   MAM 02-DEC-2023
DEFINITION  steroidogenic factor 1 [Dama dama].
ACCESSION   XP_061010667
VERSION     XP_061010667.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154684.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..461
                     /product="steroidogenic factor 1"
                     /calculated_mol_wt=51458
     Region          13..105
                     /region_name="NR_DBD_Lrh-1_like"
                     /note="The DNA-binding domain of Lrh-1 like nuclear
                     receptor family like is composed of two C4-type zinc
                     fingers; cd07167"
                     /db_xref="CDD:143541"
     Site            order(13,16,30,33,49,55,65,68)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143541"
     Site            order(23..25,31..32,34,36,38..39,42,62..63,69,82..84,
                     87..93,99)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143541"
     Region          223..459
                     /region_name="NR_LBD_SF-1"
                     /note="The ligand binding domain of nuclear receptor
                     steroidogenic factor 1, a member of nuclear receptor
                     superfamily; cd07070"
                     /db_xref="CDD:132755"
     Site            order(262,265,303,306..307,310,323,325,331,335..336,
                     339..341,344,351,430,433,436..437,440)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:132755"
     Site            order(294..295,451,454..455)
                     /site_type="active"
                     /note="corepressor recognition site [active]"
                     /db_xref="CDD:132755"
     CDS             1..461
                     /gene="NR5A1"
                     /coded_by="XM_061154684.1:57..1442"
                     /db_xref="GeneID:133064494"
ORIGIN      
        1 mdysydedld elcpvcgdkv sgyhyglltc esckgffkrt vqnnkhytct esqsckidkt
       61 qrkrcpfcrf qkcltvgmrl eavradrmrg grnkfgpmyk rdralkqqkk aqirangfkl
      121 etgppmgvpp ppppppdfml phglhasepk glasgppagp lgdfgapalp mavasahgpl
      181 agylypafpg raikseypep yasppqpgpp ygypepfsgg pgvpelilql lqlepdedqv
      241 rarivgclqe pakgrpdqpa pfsllcrmad qtfisivdwa rrcmvfkele vadqmtllqn
      301 cwsellvfdh iyrqiqhgke gsillvtgqe velttvaaqa gsllhslvlr aqelvlqlha
      361 lqldrqefvc lkflilfsld vkflnnhslv kdaqekanaa lldytlchyp hcgdkfqqll
      421 lclvevrals mqakeylyhk hlgnemprnn lliemlqakq t
//
LOCUS       XP_061010668             461 aa            linear   MAM 02-DEC-2023
DEFINITION  steroidogenic factor 1 [Dama dama].
ACCESSION   XP_061010668
VERSION     XP_061010668.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154685.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..461
                     /product="steroidogenic factor 1"
                     /calculated_mol_wt=51458
     Region          13..105
                     /region_name="NR_DBD_Lrh-1_like"
                     /note="The DNA-binding domain of Lrh-1 like nuclear
                     receptor family like is composed of two C4-type zinc
                     fingers; cd07167"
                     /db_xref="CDD:143541"
     Site            order(13,16,30,33,49,55,65,68)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143541"
     Site            order(23..25,31..32,34,36,38..39,42,62..63,69,82..84,
                     87..93,99)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143541"
     Region          223..459
                     /region_name="NR_LBD_SF-1"
                     /note="The ligand binding domain of nuclear receptor
                     steroidogenic factor 1, a member of nuclear receptor
                     superfamily; cd07070"
                     /db_xref="CDD:132755"
     Site            order(262,265,303,306..307,310,323,325,331,335..336,
                     339..341,344,351,430,433,436..437,440)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:132755"
     Site            order(294..295,451,454..455)
                     /site_type="active"
                     /note="corepressor recognition site [active]"
                     /db_xref="CDD:132755"
     CDS             1..461
                     /gene="NR5A1"
                     /coded_by="XM_061154685.1:126..1511"
                     /db_xref="GeneID:133064494"
ORIGIN      
        1 mdysydedld elcpvcgdkv sgyhyglltc esckgffkrt vqnnkhytct esqsckidkt
       61 qrkrcpfcrf qkcltvgmrl eavradrmrg grnkfgpmyk rdralkqqkk aqirangfkl
      121 etgppmgvpp ppppppdfml phglhasepk glasgppagp lgdfgapalp mavasahgpl
      181 agylypafpg raikseypep yasppqpgpp ygypepfsgg pgvpelilql lqlepdedqv
      241 rarivgclqe pakgrpdqpa pfsllcrmad qtfisivdwa rrcmvfkele vadqmtllqn
      301 cwsellvfdh iyrqiqhgke gsillvtgqe velttvaaqa gsllhslvlr aqelvlqlha
      361 lqldrqefvc lkflilfsld vkflnnhslv kdaqekanaa lldytlchyp hcgdkfqqll
      421 lclvevrals mqakeylyhk hlgnemprnn lliemlqakq t
//
LOCUS       XP_061010669             277 aa            linear   MAM 02-DEC-2023
DEFINITION  proteasome subunit beta type-7 [Dama dama].
ACCESSION   XP_061010669
VERSION     XP_061010669.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154686.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..277
                     /product="proteasome subunit beta type-7"
                     /calculated_mol_wt=29780
     Region          44..232
                     /region_name="proteasome_beta_type_7"
                     /note="proteasome beta type-7 subunit. The 20S proteasome,
                     multisubunit proteolytic complex, is the central enzyme of
                     nonlysosomal protein degradation in both the cytosol and
                     nucleus. It is composed of 28 subunits arranged as four
                     homoheptameric rings that...; cd03763"
                     /db_xref="CDD:239732"
     Site            order(44,60,62,76,172,209,212..213)
                     /site_type="active"
                     /db_xref="CDD:239732"
     Site            order(62,65,67..72,92,94,109,121,124..125,127..128,131,
                     134,157,159,161..164,167,175..176,178..179,182..184,200,
                     207..210,213..214)
                     /site_type="other"
                     /note="beta subunit interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239732"
     Region          235..271
                     /region_name="Pr_beta_C"
                     /note="Proteasome beta subunits C terminal; pfam12465"
                     /db_xref="CDD:463597"
     CDS             1..277
                     /gene="PSMB7"
                     /coded_by="XM_061154686.1:98..931"
                     /db_xref="GeneID:133064495"
ORIGIN      
        1 maavsvyeap vggfsfdncr rnavleadfa kkgyklptar ktgttiagvv ykdgivlgad
       61 trategmvva dkncskihfi spniyccgag taadtdmttq lissnlelhs lstgrlprvv
      121 tanrmlkqml fryqgyigaa lvlggvdvtg phlysiyphg stdklpyvtm gsgslaamav
      181 fedkfrpdme eeeakklvse aiaagifndl gsgsnidlcv iskskldflr pysvpnkkgt
      241 rfgryrcekg ttavltekvt tleievleet vqtmdts
//
LOCUS       XP_061010670             313 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase Nek6 [Dama dama].
ACCESSION   XP_061010670
VERSION     XP_061010670.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154687.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..313
                     /product="serine/threonine-protein kinase Nek6"
                     /calculated_mol_wt=35604
     Region          44..305
                     /region_name="STKc_Nek6_7"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     Never In Mitosis gene A (NIMA)-related kinase 6 and 7;
                     cd08224"
                     /db_xref="CDD:270863"
     Site            order(51..55,59,72,74,106,122..125,129,131,172,174,
                     176..177,179,190,193,195,209..212)
                     /site_type="active"
                     /db_xref="CDD:270863"
     Site            order(51..52,54..55,59,72,74,106,123..125,129,177,179,195)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270863"
     Site            order(55,129,131,172,174,176,193,209..212)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270863"
     Site            189..212
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270863"
     CDS             1..313
                     /gene="NEK6"
                     /coded_by="XM_061154687.1:147..1088"
                     /db_xref="GeneID:133064496"
ORIGIN      
        1 magqpshmph ggnpnnlcht lgpahppdpq rhptalsfrc sladfqiekk igrgqfsevy
       61 katclldrkt valkkvqife mmdakarqdc vkeigllkql nhpniikyld sfiednelni
      121 vleladagdl sqmikyfkkq krlipertvw kyfvqlcsav ehmhsrrvmh rdikpanvfi
      181 tatgivklgd lglgrffsse ttaahslvgt pyymsperih engynfksdi wslgcllyem
      241 aalqspfygd kmnlfslcqk ieqcdypplp gehyseklre lvsmcihpdp nqrpdisyvh
      301 qiakqmhvwt sst
//
LOCUS       XP_061010671             313 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase Nek6 [Dama dama].
ACCESSION   XP_061010671
VERSION     XP_061010671.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154688.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..313
                     /product="serine/threonine-protein kinase Nek6"
                     /calculated_mol_wt=35604
     Region          44..305
                     /region_name="STKc_Nek6_7"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     Never In Mitosis gene A (NIMA)-related kinase 6 and 7;
                     cd08224"
                     /db_xref="CDD:270863"
     Site            order(51..55,59,72,74,106,122..125,129,131,172,174,
                     176..177,179,190,193,195,209..212)
                     /site_type="active"
                     /db_xref="CDD:270863"
     Site            order(51..52,54..55,59,72,74,106,123..125,129,177,179,195)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270863"
     Site            order(55,129,131,172,174,176,193,209..212)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270863"
     Site            189..212
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270863"
     CDS             1..313
                     /gene="NEK6"
                     /coded_by="XM_061154688.1:118..1059"
                     /db_xref="GeneID:133064496"
ORIGIN      
        1 magqpshmph ggnpnnlcht lgpahppdpq rhptalsfrc sladfqiekk igrgqfsevy
       61 katclldrkt valkkvqife mmdakarqdc vkeigllkql nhpniikyld sfiednelni
      121 vleladagdl sqmikyfkkq krlipertvw kyfvqlcsav ehmhsrrvmh rdikpanvfi
      181 tatgivklgd lglgrffsse ttaahslvgt pyymsperih engynfksdi wslgcllyem
      241 aalqspfygd kmnlfslcqk ieqcdypplp gehyseklre lvsmcihpdp nqrpdisyvh
      301 qiakqmhvwt sst
//
LOCUS       XP_061010672            1027 aa            linear   MAM 02-DEC-2023
DEFINITION  DENN domain-containing protein 1A isoform X1 [Dama dama].
ACCESSION   XP_061010672
VERSION     XP_061010672.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154689.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1027
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1027
                     /product="DENN domain-containing protein 1A isoform X1"
                     /calculated_mol_wt=112614
     Region          9..91
                     /region_name="uDENN"
                     /note="Domain always found upstream of DENN domain, found
                     in a variety of signalling proteins; smart00800"
                     /db_xref="CDD:214824"
     Region          95..273
                     /region_name="DENN"
                     /note="Domain found in a variety of signalling proteins,
                     always encircled by uDENN and dDENN; smart00799"
                     /db_xref="CDD:214823"
     Region          305..371
                     /region_name="dDENN"
                     /note="Domain always found downstream of DENN domain,
                     found in a variety of signalling proteins; smart00801"
                     /db_xref="CDD:129037"
     Region          <526..1013
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1027
                     /gene="DENND1A"
                     /coded_by="XM_061154689.1:219..3302"
                     /db_xref="GeneID:133064497"
ORIGIN      
        1 mgsrikqnpe ttfevyveva yprtggtlsd pevqrqfped ysdqevlqtl tkfcfpfyvd
       61 sltvsqvgqn ftfvltdids kqrfgfcrls sgakscfcfl sylpwfevfy kllniladyt
      121 tkgqesqwne lletlyklpi pdpgvsvhls vhsyftvpdt relpsipenr nlteyfvavd
      181 vnnmlhlyas mlyerrilii csklstltac ihgsaamlyp mfwqhvyipv lpphlldycc
      241 apmpyligih lslmekvrnm alddvvilnv dtntletpfd dlqslpndvi sslknrlkkv
      301 stttgdgvar aflkaqaaff gsyrnalkie peepitfcee afvshyrsga mrqflqnatq
      361 lqlfkqfidg rldllnsgeg fsdvfeeein mgeyagsdkl yhqwlstvrk gsgailntvk
      421 tkanpamktv ykfakdhakm gikevknrlk qkditengca ptteeqlpkt apsplveakd
      481 pkfredrrpi tvhfgqpqrl rptrppppki qrsrpvrppr phvikrpksn itvearrtsv
      541 sspdqpqpyr tlkesdsagd eaespeqrar epvgptpaph draasidlle dvfsnldmev
      601 plqplgqaks ledlrtpkdv reqpgtfdyq rldlgrsdrs rgtpgalklt hphsrlwslg
      661 qddmaipskp paacpkkpsa llgnslaspc rpqnqnglln psekeevptp tlgsitiprp
      721 qgrktpelgi vpppptarpa klqapgltlg dfserlpaew erqaalssap fpgllssaap
      781 qdptellqpl slapgaagss sdallalldp lntawsgsal ppgptapnva tpftpqisfp
      841 pmgtptpfpq pslnpfvpsv patlptmplv sapagpfgar paslgpafap tlllsgsgfc
      901 aprrpqpsls alsmpnlfgq vpmgthspqp lgppavapsr irtlplarss araaeakqgl
      961 alrpgdppll psrppqglep alqpsaprea rdpfedllrk tkqdvssapa papgsveqlr
     1021 kqwetfe
//
LOCUS       XP_061010673            1009 aa            linear   MAM 02-DEC-2023
DEFINITION  DENN domain-containing protein 1A isoform X2 [Dama dama].
ACCESSION   XP_061010673
VERSION     XP_061010673.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154690.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1009
                     /product="DENN domain-containing protein 1A isoform X2"
                     /calculated_mol_wt=110569
     Region          10..92
                     /region_name="uDENN"
                     /note="Domain always found upstream of DENN domain, found
                     in a variety of signalling proteins; smart00800"
                     /db_xref="CDD:214824"
     Region          96..274
                     /region_name="DENN"
                     /note="Domain found in a variety of signalling proteins,
                     always encircled by uDENN and dDENN; smart00799"
                     /db_xref="CDD:214823"
     Region          306..372
                     /region_name="dDENN"
                     /note="Domain always found downstream of DENN domain,
                     found in a variety of signalling proteins; smart00801"
                     /db_xref="CDD:129037"
     Region          <473..995
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1009
                     /gene="DENND1A"
                     /coded_by="XM_061154690.1:1..3030"
                     /db_xref="GeneID:133064497"
ORIGIN      
        1 mvcffcrqnp ettfevyvev ayprtggtls dpevqrqfpe dysdqevlqt ltkfcfpfyv
       61 dsltvsqvgq nftfvltdid skqrfgfcrl ssgakscfcf lsylpwfevf ykllnilady
      121 ttkgqesqwn elletlyklp ipdpgvsvhl svhsyftvpd trelpsipen rnlteyfvav
      181 dvnnmlhlya smlyerrili icsklstlta cihgsaamly pmfwqhvyip vlpphlldyc
      241 capmpyligi hlslmekvrn malddvviln vdtntletpf ddlqslpndv isslknrlkk
      301 vstttgdgva raflkaqaaf fgsyrnalki epeepitfce eafvshyrsg amrqflqnat
      361 qlqlfkqfid grldllnsge gfsdvfeeei nmgeyagsdk lyhqwlstvr kgsgailntv
      421 ktkanpamkt vykfakdhak mgikevknrl kqkditengc aptteeqlpk tapsplveak
      481 dpkfredrrp itvhfgqvrp prphvikrpk snitvearrt svsspdqpqp yrtlkesdsa
      541 gdeaespeqr arepvgptpa phdraasidl ledvfsnldm evplqplgqa ksledlrtpk
      601 dvreqpgtfd yqrldlgrsd rsrgtpgalk lthphsrlws lgqddmaips kppaacpkkp
      661 sallgnslas pcrpqnqngl lnpsekeevp tptlgsitip rpqgrktpel givpppptar
      721 paklqapglt lgdfserlpa ewerqaalss apfpgllssa apqdptellq plslapgaag
      781 sssdallall dplntawsgs alppgptapn vatpftpqis fppmgtptpf pqpslnpfvp
      841 svpatlptmp lvsapagpfg arpaslgpaf aptlllsgsg fcaprrpqps lsalsmpnlf
      901 gqvpmgthsp qplgppavap srirtlplar ssaraaeakq glalrpgdpp llpsrppqgl
      961 epalqpsapr eardpfedll rktkqdvssa papapgsveq lrkqwetfe
//
LOCUS       XP_061010674             898 aa            linear   MAM 02-DEC-2023
DEFINITION  DENN domain-containing protein 1A isoform X3 [Dama dama].
ACCESSION   XP_061010674
VERSION     XP_061010674.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154691.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..898
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..898
                     /product="DENN domain-containing protein 1A isoform X3"
                     /calculated_mol_wt=97623
     Region          <41..144
                     /region_name="DENN"
                     /note="Domain found in a variety of signalling proteins,
                     always encircled by uDENN and dDENN; smart00799"
                     /db_xref="CDD:214823"
     Region          176..242
                     /region_name="dDENN"
                     /note="Domain always found downstream of DENN domain,
                     found in a variety of signalling proteins; smart00801"
                     /db_xref="CDD:129037"
     Region          <397..884
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..898
                     /gene="DENND1A"
                     /coded_by="XM_061154691.1:155..2851"
                     /db_xref="GeneID:133064497"
ORIGIN      
        1 msfsklctnf lsltqeclfi sacilillcl ipenfpaslr inlteyfvav dvnnmlhlya
       61 smlyerrili icsklstlta cihgsaamly pmfwqhvyip vlpphlldyc capmpyligi
      121 hlslmekvrn malddvviln vdtntletpf ddlqslpndv isslknrlkk vstttgdgva
      181 raflkaqaaf fgsyrnalki epeepitfce eafvshyrsg amrqflqnat qlqlfkqfid
      241 grldllnsge gfsdvfeeei nmgeyagsdk lyhqwlstvr kgsgailntv ktkanpamkt
      301 vykfakdhak mgikevknrl kqkditengc aptteeqlpk tapsplveak dpkfredrrp
      361 itvhfgqpqr lrptrppppk iqrsrpvrpp rphvikrpks nitvearrts vsspdqpqpy
      421 rtlkesdsag deaespeqra repvgptpap hdraasidll edvfsnldme vplqplgqak
      481 sledlrtpkd vreqpgtfdy qrldlgrsdr srgtpgalkl thphsrlwsl gqddmaipsk
      541 ppaacpkkps allgnslasp crpqnqngll npsekeevpt ptlgsitipr pqgrktpelg
      601 ivpppptarp aklqapgltl gdfserlpae werqaalssa pfpgllssaa pqdptellqp
      661 lslapgaags ssdallalld plntawsgsa lppgptapnv atpftpqisf ppmgtptpfp
      721 qpslnpfvps vpatlptmpl vsapagpfga rpaslgpafa ptlllsgsgf caprrpqpsl
      781 salsmpnlfg qvpmgthspq plgppavaps rirtlplars saraaeakqg lalrpgdppl
      841 lpsrppqgle palqpsapre ardpfedllr ktkqdvssap apapgsveql rkqwetfe
//
LOCUS       XP_061010675             526 aa            linear   MAM 02-DEC-2023
DEFINITION  DENN domain-containing protein 1A isoform X4 [Dama dama].
ACCESSION   XP_061010675
VERSION     XP_061010675.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154692.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..526
                     /product="DENN domain-containing protein 1A isoform X4"
                     /calculated_mol_wt=59675
     Region          9..91
                     /region_name="uDENN"
                     /note="Domain always found upstream of DENN domain, found
                     in a variety of signalling proteins; smart00800"
                     /db_xref="CDD:214824"
     Region          95..273
                     /region_name="DENN"
                     /note="Domain found in a variety of signalling proteins,
                     always encircled by uDENN and dDENN; smart00799"
                     /db_xref="CDD:214823"
     Region          305..371
                     /region_name="dDENN"
                     /note="Domain always found downstream of DENN domain,
                     found in a variety of signalling proteins; smart00801"
                     /db_xref="CDD:129037"
     CDS             1..526
                     /gene="DENND1A"
                     /coded_by="XM_061154692.1:208..1788"
                     /db_xref="GeneID:133064497"
ORIGIN      
        1 mgsrikqnpe ttfevyveva yprtggtlsd pevqrqfped ysdqevlqtl tkfcfpfyvd
       61 sltvsqvgqn ftfvltdids kqrfgfcrls sgakscfcfl sylpwfevfy kllniladyt
      121 tkgqesqwne lletlyklpi pdpgvsvhls vhsyftvpdt relpsipenr nlteyfvavd
      181 vnnmlhlyas mlyerrilii csklstltac ihgsaamlyp mfwqhvyipv lpphlldycc
      241 apmpyligih lslmekvrnm alddvvilnv dtntletpfd dlqslpndvi sslknrlkkv
      301 stttgdgvar aflkaqaaff gsyrnalkie peepitfcee afvshyrsga mrqflqnatq
      361 lqlfkqfidg rldllnsgeg fsdvfeeein mgeyagsdkl yhqwlstvrk gsgailntvk
      421 tkanpamktv ykfakdhakm gikevknrlk qkditengca ptteeqlpkt apsplveakd
      481 pkfredrrpi tvhfgqvrpp rphvikrpks nitvearrts vsspdq
//
LOCUS       XP_061010676             516 aa            linear   MAM 02-DEC-2023
DEFINITION  DENN domain-containing protein 1A isoform X5 [Dama dama].
ACCESSION   XP_061010676
VERSION     XP_061010676.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154693.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..516
                     /product="DENN domain-containing protein 1A isoform X5"
                     /calculated_mol_wt=58671
     Region          9..91
                     /region_name="uDENN"
                     /note="Domain always found upstream of DENN domain, found
                     in a variety of signalling proteins; smart00800"
                     /db_xref="CDD:214824"
     Region          95..273
                     /region_name="DENN"
                     /note="Domain found in a variety of signalling proteins,
                     always encircled by uDENN and dDENN; smart00799"
                     /db_xref="CDD:214823"
     Region          305..371
                     /region_name="dDENN"
                     /note="Domain always found downstream of DENN domain,
                     found in a variety of signalling proteins; smart00801"
                     /db_xref="CDD:129037"
     CDS             1..516
                     /gene="DENND1A"
                     /coded_by="XM_061154693.1:212..1762"
                     /db_xref="GeneID:133064497"
ORIGIN      
        1 mgsrikqnpe ttfevyveva yprtggtlsd pevqrqfped ysdqevlqtl tkfcfpfyvd
       61 sltvsqvgqn ftfvltdids kqrfgfcrls sgakscfcfl sylpwfevfy kllniladyt
      121 tkgqesqwne lletlyklpi pdpgvsvhls vhsyftvpdt relpsipenr nlteyfvavd
      181 vnnmlhlyas mlyerrilii csklstltac ihgsaamlyp mfwqhvyipv lpphlldycc
      241 apmpyligih lslmekvrnm alddvvilnv dtntletpfd dlqslpndvi sslknrlkkv
      301 stttgdgvar aflkaqaaff gsyrnalkie peepitfcee afvshyrsga mrqflqnatq
      361 lqlfkqfidg rldllnsgeg fsdvfeeein mgeyagsdkl yhqwlstvrk gsgailntvk
      421 tkanpamktv ykfakdhakm gikevknrlk qkditengca ptteeqlpkt apsplveakd
      481 pkfredrrpi tvhfgqlslt kqktpwssah cqrftw
//
LOCUS       XP_061010677            1070 aa            linear   MAM 02-DEC-2023
DEFINITION  DENN domain-containing protein 1A isoform X6 [Dama dama].
ACCESSION   XP_061010677
VERSION     XP_061010677.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154694.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1070
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1070
                     /product="DENN domain-containing protein 1A isoform X6"
                     /calculated_mol_wt=117611
     Region          9..91
                     /region_name="uDENN"
                     /note="Domain always found upstream of DENN domain, found
                     in a variety of signalling proteins; smart00800"
                     /db_xref="CDD:214824"
     Region          95..273
                     /region_name="DENN"
                     /note="Domain found in a variety of signalling proteins,
                     always encircled by uDENN and dDENN; smart00799"
                     /db_xref="CDD:214823"
     Region          305..371
                     /region_name="dDENN"
                     /note="Domain always found downstream of DENN domain,
                     found in a variety of signalling proteins; smart00801"
                     /db_xref="CDD:129037"
     Region          <695..1056
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1070
                     /gene="DENND1A"
                     /coded_by="XM_061154694.1:221..3433"
                     /db_xref="GeneID:133064497"
ORIGIN      
        1 mgsrikqnpe ttfevyveva yprtggtlsd pevqrqfped ysdqevlqtl tkfcfpfyvd
       61 sltvsqvgqn ftfvltdids kqrfgfcrls sgakscfcfl sylpwfevfy kllniladyt
      121 tkgqesqwne lletlyklpi pdpgvsvhls vhsyftvpdt relpsipenr nlteyfvavd
      181 vnnmlhlyas mlyerrilii csklstltac ihgsaamlyp mfwqhvyipv lpphlldycc
      241 apmpyligih lslmekvrnm alddvvilnv dtntletpfd dlqslpndvi sslknrlkkv
      301 stttgdgvar aflkaqaaff gsyrnalkie peepitfcee afvshyrsga mrqflqnatq
      361 lqlfkqfidg rldllnsgeg fsdvfeeein mgeyagsdkl yhqwlstvrk gsgailntvk
      421 tkanpamktv ykfakdhakm gikevknrlk qkditengca ptteeqlpkt apsplveakd
      481 pkfredrrpi tvhfgqpqrl rptrppppki qrsrpvrppr phvikrpksn itvearrtsv
      541 sspdhlvkpl rhyavflsed ssddecqree gpssgftesf ffstpfewpq pyrtlkesds
      601 agdeaespeq rarepvgptp aphdraasid lledvfsnld mevplqplgq aksledlrtp
      661 kdvreqpgtf dyqrldlgrs drsrgtpgal klthphsrlw slgqddmaip skppaacpkk
      721 psallgnsla spcrpqnqng llnpsekeev ptptlgsiti prpqgrktpe lgivppppta
      781 rpaklqapgl tlgdfserlp aewerqaals sapfpgllss aapqdptell qplslapgaa
      841 gsssdallal ldplntawsg salppgptap nvatpftpqi sfppmgtptp fpqpslnpfv
      901 psvpatlptm plvsapagpf garpaslgpa faptlllsgs gfcaprrpqp slsalsmpnl
      961 fgqvpmgths pqplgppava psrirtlpla rssaraaeak qglalrpgdp pllpsrppqg
     1021 lepalqpsap reardpfedl lrktkqdvss apapapgsve qlrkqwetfe
//
LOCUS       XP_061010678             217 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein uL1-like [Dama dama].
ACCESSION   XP_061010678
VERSION     XP_061010678.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154695.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..217
                     /product="large ribosomal subunit protein uL1-like"
                     /calculated_mol_wt=24541
     Region          2..217
                     /region_name="Ribosomal_L1"
                     /note="Ribosomal protein L1. The L1 protein, located near
                     the E-site of the ribosome, forms part of the L1 stalk
                     along with 23S rRNA. In bacteria and archaea, L1 functions
                     both as a ribosomal protein that binds rRNA, and as a
                     translation repressor that binds...; cl00322"
                     /db_xref="CDD:469720"
     Site            order(26..28,31,33,35,37,162,164,166,210..211,213)
                     /site_type="other"
                     /note="mRNA/rRNA interface [nucleotide binding]"
                     /db_xref="CDD:238235"
     CDS             1..217
                     /gene="LOC133064499"
                     /coded_by="XM_061154695.1:32..685"
                     /db_xref="GeneID:133064499"
ORIGIN      
        1 msskvshntl yeavrevlhg nqrkrrkfle tvelqislkn ydpqkdkhfs gtvrlkstpr
       61 pkfsvcvlgd qqhcdeakav diphmdteal kklnknkklv kklakkydaf laseslikqi
      121 prilgpglne agkfpsllth nenmvakvde vkstvkfqmk kvlclavaag hvkmtddelv
      181 ynihlavnfl vsllkknwqn vralyinstm gkpqcly
//
LOCUS       XP_061010679             672 aa            linear   MAM 02-DEC-2023
DEFINITION  spermatid perinuclear RNA-binding protein isoform X1 [Dama dama].
ACCESSION   XP_061010679
VERSION     XP_061010679.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154696.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..672
                     /product="spermatid perinuclear RNA-binding protein
                     isoform X1"
                     /calculated_mol_wt=73449
     Region          81..334
                     /region_name="DZF"
                     /note="domain in DSRM or ZnF_C2H2 domain containing
                     proteins; smart00572"
                     /db_xref="CDD:128842"
     Region          384..467
                     /region_name="DSRM_STRBP_rpt1"
                     /note="first double-stranded RNA binding motif of
                     spermatid perinuclear RNA-binding protein (STRBP) and
                     similar proteins; cd19909"
                     /db_xref="CDD:380738"
     Site            order(389,392..393,396..397,399,413..414,416,418,435..437,
                     440)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:380738"
     Region          512..575
                     /region_name="DSRM_STRBP_rpt2"
                     /note="second double-stranded RNA binding motif of
                     spermatid perinuclear RNA-binding protein (STRBP) and
                     similar proteins; cd19911"
                     /db_xref="CDD:380740"
     Site            order(513,515..516,519,532,535..537,541,557..560)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:380740"
     CDS             1..672
                     /gene="STRBP"
                     /coded_by="XM_061154696.1:313..2331"
                     /db_xref="GeneID:133064500"
ORIGIN      
        1 mrsirsfand drhvmvkhst iypspeelea vqnmvstvec alkhvsdwld etskgtkaeg
       61 etevkkeeav dtyskdqggr tlcgvmrigl vakgllikdd mdlelvlmck dkptetllnt
      121 vkdnlpiqiq klteekyqve qcvdeasiii rntkeptltl kviltsplir delekkdgek
      181 vamkdppdll drqkclnala slrhakwfqa ranglkscvi vlrilrdlcn rvptwaplkg
      241 wpleliceks igtcnrplga gealrrvmec lasgillpgg pglhdpcerd ptdalsymti
      301 qqkedithsa qhalrlsafg qiykvlemdp lpsskpfqky swsvtdkega gssalkrpfe
      361 dglgddkdpn kkmkrnlrki ldskaidlmn almrlnqirp glqykllsqs gpvhapvftm
      421 svdvdgttye asgpskktak lhvavkvlqa mgyptgfdad iecmssdeks dnegknetvs
      481 snssnntgns ttetsstlev rtqgpiltas gknpvmelne krrglkyeli setggshdkr
      541 fvmevevdgq kfrgagpnkk vakasaalaa leklfsgpna gnnkkkkiip qakgvvntav
      601 saavqavrgr grgtltrgaf vgataapgyi apgygtpygy staapayglp krmvllpvmk
      661 fptypvphys ff
//
LOCUS       XP_061010680             672 aa            linear   MAM 02-DEC-2023
DEFINITION  spermatid perinuclear RNA-binding protein isoform X1 [Dama dama].
ACCESSION   XP_061010680
VERSION     XP_061010680.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154697.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..672
                     /product="spermatid perinuclear RNA-binding protein
                     isoform X1"
                     /calculated_mol_wt=73449
     Region          81..334
                     /region_name="DZF"
                     /note="domain in DSRM or ZnF_C2H2 domain containing
                     proteins; smart00572"
                     /db_xref="CDD:128842"
     Region          384..467
                     /region_name="DSRM_STRBP_rpt1"
                     /note="first double-stranded RNA binding motif of
                     spermatid perinuclear RNA-binding protein (STRBP) and
                     similar proteins; cd19909"
                     /db_xref="CDD:380738"
     Site            order(389,392..393,396..397,399,413..414,416,418,435..437,
                     440)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:380738"
     Region          512..575
                     /region_name="DSRM_STRBP_rpt2"
                     /note="second double-stranded RNA binding motif of
                     spermatid perinuclear RNA-binding protein (STRBP) and
                     similar proteins; cd19911"
                     /db_xref="CDD:380740"
     Site            order(513,515..516,519,532,535..537,541,557..560)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:380740"
     CDS             1..672
                     /gene="STRBP"
                     /coded_by="XM_061154697.1:221..2239"
                     /db_xref="GeneID:133064500"
ORIGIN      
        1 mrsirsfand drhvmvkhst iypspeelea vqnmvstvec alkhvsdwld etskgtkaeg
       61 etevkkeeav dtyskdqggr tlcgvmrigl vakgllikdd mdlelvlmck dkptetllnt
      121 vkdnlpiqiq klteekyqve qcvdeasiii rntkeptltl kviltsplir delekkdgek
      181 vamkdppdll drqkclnala slrhakwfqa ranglkscvi vlrilrdlcn rvptwaplkg
      241 wpleliceks igtcnrplga gealrrvmec lasgillpgg pglhdpcerd ptdalsymti
      301 qqkedithsa qhalrlsafg qiykvlemdp lpsskpfqky swsvtdkega gssalkrpfe
      361 dglgddkdpn kkmkrnlrki ldskaidlmn almrlnqirp glqykllsqs gpvhapvftm
      421 svdvdgttye asgpskktak lhvavkvlqa mgyptgfdad iecmssdeks dnegknetvs
      481 snssnntgns ttetsstlev rtqgpiltas gknpvmelne krrglkyeli setggshdkr
      541 fvmevevdgq kfrgagpnkk vakasaalaa leklfsgpna gnnkkkkiip qakgvvntav
      601 saavqavrgr grgtltrgaf vgataapgyi apgygtpygy staapayglp krmvllpvmk
      661 fptypvphys ff
//
LOCUS       XP_061010682             672 aa            linear   MAM 02-DEC-2023
DEFINITION  spermatid perinuclear RNA-binding protein isoform X1 [Dama dama].
ACCESSION   XP_061010682
VERSION     XP_061010682.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154699.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..672
                     /product="spermatid perinuclear RNA-binding protein
                     isoform X1"
                     /calculated_mol_wt=73449
     Region          81..334
                     /region_name="DZF"
                     /note="domain in DSRM or ZnF_C2H2 domain containing
                     proteins; smart00572"
                     /db_xref="CDD:128842"
     Region          384..467
                     /region_name="DSRM_STRBP_rpt1"
                     /note="first double-stranded RNA binding motif of
                     spermatid perinuclear RNA-binding protein (STRBP) and
                     similar proteins; cd19909"
                     /db_xref="CDD:380738"
     Site            order(389,392..393,396..397,399,413..414,416,418,435..437,
                     440)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:380738"
     Region          512..575
                     /region_name="DSRM_STRBP_rpt2"
                     /note="second double-stranded RNA binding motif of
                     spermatid perinuclear RNA-binding protein (STRBP) and
                     similar proteins; cd19911"
                     /db_xref="CDD:380740"
     Site            order(513,515..516,519,532,535..537,541,557..560)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:380740"
     CDS             1..672
                     /gene="STRBP"
                     /coded_by="XM_061154699.1:185..2203"
                     /db_xref="GeneID:133064500"
ORIGIN      
        1 mrsirsfand drhvmvkhst iypspeelea vqnmvstvec alkhvsdwld etskgtkaeg
       61 etevkkeeav dtyskdqggr tlcgvmrigl vakgllikdd mdlelvlmck dkptetllnt
      121 vkdnlpiqiq klteekyqve qcvdeasiii rntkeptltl kviltsplir delekkdgek
      181 vamkdppdll drqkclnala slrhakwfqa ranglkscvi vlrilrdlcn rvptwaplkg
      241 wpleliceks igtcnrplga gealrrvmec lasgillpgg pglhdpcerd ptdalsymti
      301 qqkedithsa qhalrlsafg qiykvlemdp lpsskpfqky swsvtdkega gssalkrpfe
      361 dglgddkdpn kkmkrnlrki ldskaidlmn almrlnqirp glqykllsqs gpvhapvftm
      421 svdvdgttye asgpskktak lhvavkvlqa mgyptgfdad iecmssdeks dnegknetvs
      481 snssnntgns ttetsstlev rtqgpiltas gknpvmelne krrglkyeli setggshdkr
      541 fvmevevdgq kfrgagpnkk vakasaalaa leklfsgpna gnnkkkkiip qakgvvntav
      601 saavqavrgr grgtltrgaf vgataapgyi apgygtpygy staapayglp krmvllpvmk
      661 fptypvphys ff
//
LOCUS       XP_061010683             658 aa            linear   MAM 02-DEC-2023
DEFINITION  spermatid perinuclear RNA-binding protein isoform X2 [Dama dama].
ACCESSION   XP_061010683
VERSION     XP_061010683.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154700.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..658
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..658
                     /product="spermatid perinuclear RNA-binding protein
                     isoform X2"
                     /calculated_mol_wt=71763
     Region          67..320
                     /region_name="DZF"
                     /note="domain in DSRM or ZnF_C2H2 domain containing
                     proteins; smart00572"
                     /db_xref="CDD:128842"
     Region          370..453
                     /region_name="DSRM_STRBP_rpt1"
                     /note="first double-stranded RNA binding motif of
                     spermatid perinuclear RNA-binding protein (STRBP) and
                     similar proteins; cd19909"
                     /db_xref="CDD:380738"
     Site            order(375,378..379,382..383,385,399..400,402,404,421..423,
                     426)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:380738"
     Region          498..561
                     /region_name="DSRM_STRBP_rpt2"
                     /note="second double-stranded RNA binding motif of
                     spermatid perinuclear RNA-binding protein (STRBP) and
                     similar proteins; cd19911"
                     /db_xref="CDD:380740"
     Site            order(499,501..502,505,518,521..523,527,543..546)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:380740"
     CDS             1..658
                     /gene="STRBP"
                     /coded_by="XM_061154700.1:151..2127"
                     /db_xref="GeneID:133064500"
ORIGIN      
        1 mvkhstiyps peeleavqnm vstvecalkh vsdwldetsk gtkaegetev kkeeavdtys
       61 kdqggrtlcg vmriglvakg llikddmdle lvlmckdkpt etllntvkdn lpiqiqklte
      121 ekyqveqcvd easiiirntk eptltlkvil tsplirdele kkdgekvamk dppdlldrqk
      181 clnalaslrh akwfqarang lkscvivlri lrdlcnrvpt waplkgwple liceksigtc
      241 nrplgageal rrvmeclasg illpggpglh dpcerdptda lsymtiqqke dithsaqhal
      301 rlsafgqiyk vlemdplpss kpfqkyswsv tdkegagssa lkrpfedglg ddkdpnkkmk
      361 rnlrkildsk aidlmnalmr lnqirpglqy kllsqsgpvh apvftmsvdv dgttyeasgp
      421 skktaklhva vkvlqamgyp tgfdadiecm ssdeksdneg knetvssnss nntgnsttet
      481 sstlevrtqg piltasgknp vmelnekrrg lkyelisetg gshdkrfvme vevdgqkfrg
      541 agpnkkvaka saalaalekl fsgpnagnnk kkkiipqakg vvntavsaav qavrgrgrgt
      601 ltrgafvgat aapgyiapgy gtpygystaa payglpkrmv llpvmkfpty pvphysff
//
LOCUS       XP_061010684             625 aa            linear   MAM 02-DEC-2023
DEFINITION  spermatid perinuclear RNA-binding protein isoform X3 [Dama dama].
ACCESSION   XP_061010684
VERSION     XP_061010684.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154701.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..625
                     /product="spermatid perinuclear RNA-binding protein
                     isoform X3"
                     /calculated_mol_wt=68576
     Region          81..334
                     /region_name="DZF"
                     /note="domain in DSRM or ZnF_C2H2 domain containing
                     proteins; smart00572"
                     /db_xref="CDD:128842"
     Region          384..467
                     /region_name="DSRM_STRBP_rpt1"
                     /note="first double-stranded RNA binding motif of
                     spermatid perinuclear RNA-binding protein (STRBP) and
                     similar proteins; cd19909"
                     /db_xref="CDD:380738"
     Site            order(389,392..393,396..397,399,413..414,416,418,435..437,
                     440)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:380738"
     Region          506..>546
                     /region_name="DSRM_SF"
                     /note="double-stranded RNA binding motif (DSRM)
                     superfamily; cl00054"
                     /db_xref="CDD:444671"
     CDS             1..625
                     /gene="STRBP"
                     /coded_by="XM_061154701.1:313..2190"
                     /db_xref="GeneID:133064500"
ORIGIN      
        1 mrsirsfand drhvmvkhst iypspeelea vqnmvstvec alkhvsdwld etskgtkaeg
       61 etevkkeeav dtyskdqggr tlcgvmrigl vakgllikdd mdlelvlmck dkptetllnt
      121 vkdnlpiqiq klteekyqve qcvdeasiii rntkeptltl kviltsplir delekkdgek
      181 vamkdppdll drqkclnala slrhakwfqa ranglkscvi vlrilrdlcn rvptwaplkg
      241 wpleliceks igtcnrplga gealrrvmec lasgillpgg pglhdpcerd ptdalsymti
      301 qqkedithsa qhalrlsafg qiykvlemdp lpsskpfqky swsvtdkega gssalkrpfe
      361 dglgddkdpn kkmkrnlrki ldskaidlmn almrlnqirp glqykllsqs gpvhapvftm
      421 svdvdgttye asgpskktak lhvavkvlqa mgyptgfdad iecmssdeks dnegknetvs
      481 snssnntgns ttetsstlev rtqgpiltas gknpvmelne krrglkyeli setggshdkr
      541 fvmeakgvvn tavsaavqav rgrgrgtltr gafvgataap gyiapgygtp ygystaapay
      601 glpkrmvllp vmkfptypvp hysff
//
LOCUS       XP_061010685            1134 aa            linear   MAM 02-DEC-2023
DEFINITION  rab GTPase-activating protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061010685
VERSION     XP_061010685.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154702.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1134
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1134
                     /product="rab GTPase-activating protein 1 isoform X1"
                     /calculated_mol_wt=128921
     Region          145..282
                     /region_name="PTB_Rab6GAP"
                     /note="GTPase activating protein for Rab 6
                     Phosphotyrosine-binding (PTB) domain; cd01211"
                     /db_xref="CDD:269922"
     Site            order(151,238,258)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269922"
     Site            order(224..229,245,266,270)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269922"
     Region          316..446
                     /region_name="DUF3694"
                     /note="Kinesin protein; pfam12473"
                     /db_xref="CDD:463599"
     Region          669..837
                     /region_name="RabGAP-TBC"
                     /note="Rab-GTPase-TBC domain; pfam00566"
                     /db_xref="CDD:459855"
     Region          <890..>1112
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1134
                     /gene="RABGAP1"
                     /coded_by="XM_061154702.1:317..3721"
                     /db_xref="GeneID:133064501"
ORIGIN      
        1 mddkasvgki svssdsvstl nsedfvlvsr qgdetpstnn gsddektglk iigngseqql
       61 qkeladvlmd ppmddqpgdk elversqldg egdgplsnql sasstinpvs lvglqkpems
      121 lpvkpgqgds ersspftpva dedsvvfskl tylgcasvna prsevealrm msilrgqcqi
      181 sldvtlsvpn vsegtvraqd eawnvvlldp qtnteianyp iykilfcvrg hdgtpesdcf
      241 afteshynae lfrihvfrce iqeavsrily sfatafrrsa kqtplsataa pqtpdsdift
      301 fsvsleiked dgkgyfsavp kdkdrqcfkl rqgidkkivi yvqqttnkel aiercfglll
      361 spgkdvrnsd mhlldlesmg kssdgksyvi tgswnpksph fqvvneetpk dkvlfmttav
      421 dlvitevqep vrflletkvr vcspnerlfw pfskrstten fflklkqikq kerknntdtl
      481 yevvcleses ererrkttas psirlpqsgs qssmipsppe ddeeedndep llsgsgdvsk
      541 ecaekiletw gellskwhln lsvrpkqlss lvrsgvpeal rgevwqllag chnndhlvek
      601 yrilitkslr hvrlfaspwt iahqaplslk ffrqeywsgl pfhspgdlpd pkikptssas
      661 palespqdsa itrdinrtfp ahdyfkdtgg dgqdslykic kaysvydeei gycqgqsfla
      721 avlllhmpee qafsvlvkim fdyglrelfk qnfedlhckf yqlerlmqey ipdlynhfld
      781 isleahmyas qwfltlftak fplymvfhii dlllcegisv ifnvalgllk tskddllltd
      841 fegalkffrv qlpkryrsee nakklmelac nmkisqkklk kyekeyhtmr eqqaqqedpi
      901 erferenrrl qeanmrleqe nddlahelvt skialrkdld naeekadaln kellmtkqkl
      961 idaeeekrrl eeesaqlkem crreldkaes eikknssiig dykqicsqls erlekqqtan
     1021 kveiekirqk vddcercref fnkegrvkgt gytkedvded tdeeketlkn qlremelela
     1081 qtklqlveae ckiqdlehhl glalnevqaa kktwfnrtls siktatgvqg ketc
//
LOCUS       XP_061010686            1134 aa            linear   MAM 02-DEC-2023
DEFINITION  rab GTPase-activating protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061010686
VERSION     XP_061010686.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154703.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1134
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1134
                     /product="rab GTPase-activating protein 1 isoform X1"
                     /calculated_mol_wt=128921
     Region          145..282
                     /region_name="PTB_Rab6GAP"
                     /note="GTPase activating protein for Rab 6
                     Phosphotyrosine-binding (PTB) domain; cd01211"
                     /db_xref="CDD:269922"
     Site            order(151,238,258)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269922"
     Site            order(224..229,245,266,270)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269922"
     Region          316..446
                     /region_name="DUF3694"
                     /note="Kinesin protein; pfam12473"
                     /db_xref="CDD:463599"
     Region          669..837
                     /region_name="RabGAP-TBC"
                     /note="Rab-GTPase-TBC domain; pfam00566"
                     /db_xref="CDD:459855"
     Region          <890..>1112
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1134
                     /gene="RABGAP1"
                     /coded_by="XM_061154703.1:138..3542"
                     /db_xref="GeneID:133064501"
ORIGIN      
        1 mddkasvgki svssdsvstl nsedfvlvsr qgdetpstnn gsddektglk iigngseqql
       61 qkeladvlmd ppmddqpgdk elversqldg egdgplsnql sasstinpvs lvglqkpems
      121 lpvkpgqgds ersspftpva dedsvvfskl tylgcasvna prsevealrm msilrgqcqi
      181 sldvtlsvpn vsegtvraqd eawnvvlldp qtnteianyp iykilfcvrg hdgtpesdcf
      241 afteshynae lfrihvfrce iqeavsrily sfatafrrsa kqtplsataa pqtpdsdift
      301 fsvsleiked dgkgyfsavp kdkdrqcfkl rqgidkkivi yvqqttnkel aiercfglll
      361 spgkdvrnsd mhlldlesmg kssdgksyvi tgswnpksph fqvvneetpk dkvlfmttav
      421 dlvitevqep vrflletkvr vcspnerlfw pfskrstten fflklkqikq kerknntdtl
      481 yevvcleses ererrkttas psirlpqsgs qssmipsppe ddeeedndep llsgsgdvsk
      541 ecaekiletw gellskwhln lsvrpkqlss lvrsgvpeal rgevwqllag chnndhlvek
      601 yrilitkslr hvrlfaspwt iahqaplslk ffrqeywsgl pfhspgdlpd pkikptssas
      661 palespqdsa itrdinrtfp ahdyfkdtgg dgqdslykic kaysvydeei gycqgqsfla
      721 avlllhmpee qafsvlvkim fdyglrelfk qnfedlhckf yqlerlmqey ipdlynhfld
      781 isleahmyas qwfltlftak fplymvfhii dlllcegisv ifnvalgllk tskddllltd
      841 fegalkffrv qlpkryrsee nakklmelac nmkisqkklk kyekeyhtmr eqqaqqedpi
      901 erferenrrl qeanmrleqe nddlahelvt skialrkdld naeekadaln kellmtkqkl
      961 idaeeekrrl eeesaqlkem crreldkaes eikknssiig dykqicsqls erlekqqtan
     1021 kveiekirqk vddcercref fnkegrvkgt gytkedvded tdeeketlkn qlremelela
     1081 qtklqlveae ckiqdlehhl glalnevqaa kktwfnrtls siktatgvqg ketc
//
LOCUS       XP_061010687            1125 aa            linear   MAM 02-DEC-2023
DEFINITION  rab GTPase-activating protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061010687
VERSION     XP_061010687.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154704.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1125
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1125
                     /product="rab GTPase-activating protein 1 isoform X2"
                     /calculated_mol_wt=127907
     Region          145..273
                     /region_name="PTB_Rab6GAP"
                     /note="GTPase activating protein for Rab 6
                     Phosphotyrosine-binding (PTB) domain; cd01211"
                     /db_xref="CDD:269922"
     Site            order(151,229,249)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269922"
     Site            order(215..220,236,257,261)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269922"
     Region          307..437
                     /region_name="DUF3694"
                     /note="Kinesin protein; pfam12473"
                     /db_xref="CDD:463599"
     Region          660..828
                     /region_name="RabGAP-TBC"
                     /note="Rab-GTPase-TBC domain; pfam00566"
                     /db_xref="CDD:459855"
     Region          <881..>1103
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1125
                     /gene="RABGAP1"
                     /coded_by="XM_061154704.1:316..3693"
                     /db_xref="GeneID:133064501"
ORIGIN      
        1 mddkasvgki svssdsvstl nsedfvlvsr qgdetpstnn gsddektglk iigngseqql
       61 qkeladvlmd ppmddqpgdk elversqldg egdgplsnql sasstinpvs lvglqkpems
      121 lpvkpgqgds ersspftpva dedsvvfskl tylgcasvna prsevealrm msilrgqcqi
      181 sldvtlsvpn vsegtvrlld pqtnteiany piykilfcvr ghdgtpesdc fafteshyna
      241 elfrihvfrc eiqeavsril ysfatafrrs akqtplsata apqtpdsdif tfsvsleike
      301 ddgkgyfsav pkdkdrqcfk lrqgidkkiv iyvqqttnke laiercfgll lspgkdvrns
      361 dmhlldlesm gkssdgksyv itgswnpksp hfqvvneetp kdkvlfmtta vdlvitevqe
      421 pvrflletkv rvcspnerlf wpfskrstte nfflklkqik qkerknntdt lyevvclese
      481 sererrktta spsirlpqsg sqssmipspp eddeeednde pllsgsgdvs kecaekilet
      541 wgellskwhl nlsvrpkqls slvrsgvpea lrgevwqlla gchnndhlve kyrilitksl
      601 rhvrlfaspw tiahqaplsl kffrqeywsg lpfhspgdlp dpkikptssa spalespqds
      661 aitrdinrtf pahdyfkdtg gdgqdslyki ckaysvydee igycqgqsfl aavlllhmpe
      721 eqafsvlvki mfdyglrelf kqnfedlhck fyqlerlmqe yipdlynhfl disleahmya
      781 sqwfltlfta kfplymvfhi idlllcegis vifnvalgll ktskddlllt dfegalkffr
      841 vqlpkryrse enakklmela cnmkisqkkl kkyekeyhtm reqqaqqedp ierferenrr
      901 lqeanmrleq enddlahelv tskialrkdl dnaeekadal nkellmtkqk lidaeeekrr
      961 leeesaqlke mcrreldkae seikknssii gdykqicsql serlekqqta nkveiekirq
     1021 kvddcercre ffnkegrvkg tgytkedvde dtdeeketlk nqlremelel aqtklqlvea
     1081 eckiqdlehh lglalnevqa akktwfnrtl ssiktatgvq gketc
//
LOCUS       XP_061010688            1078 aa            linear   MAM 02-DEC-2023
DEFINITION  rab GTPase-activating protein 1 isoform X3 [Dama dama].
ACCESSION   XP_061010688
VERSION     XP_061010688.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154705.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1078
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1078
                     /product="rab GTPase-activating protein 1 isoform X3"
                     /calculated_mol_wt=122653
     Region          145..282
                     /region_name="PTB_Rab6GAP"
                     /note="GTPase activating protein for Rab 6
                     Phosphotyrosine-binding (PTB) domain; cd01211"
                     /db_xref="CDD:269922"
     Site            order(151,238,258)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269922"
     Site            order(224..229,245,266,270)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269922"
     Region          316..446
                     /region_name="DUF3694"
                     /note="Kinesin protein; pfam12473"
                     /db_xref="CDD:463599"
     Region          572..781
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     Region          <834..>1056
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1078
                     /gene="RABGAP1"
                     /coded_by="XM_061154705.1:315..3551"
                     /db_xref="GeneID:133064501"
ORIGIN      
        1 mddkasvgki svssdsvstl nsedfvlvsr qgdetpstnn gsddektglk iigngseqql
       61 qkeladvlmd ppmddqpgdk elversqldg egdgplsnql sasstinpvs lvglqkpems
      121 lpvkpgqgds ersspftpva dedsvvfskl tylgcasvna prsevealrm msilrgqcqi
      181 sldvtlsvpn vsegtvraqd eawnvvlldp qtnteianyp iykilfcvrg hdgtpesdcf
      241 afteshynae lfrihvfrce iqeavsrily sfatafrrsa kqtplsataa pqtpdsdift
      301 fsvsleiked dgkgyfsavp kdkdrqcfkl rqgidkkivi yvqqttnkel aiercfglll
      361 spgkdvrnsd mhlldlesmg kssdgksyvi tgswnpksph fqvvneetpk dkvlfmttav
      421 dlvitevqep vrflletkvr vcspnerlfw pfskrstten fflklkqikq kerknntdtl
      481 yevvcleses ererrkttas psirlpqsgs qssmipsppe ddeeedndep llsgsgdvsk
      541 ecaekiletw gellskwhln lsvrpkqlss lvrsgvpeal rgevwqllag chnndhlvek
      601 yrilitkesp qdsaitrdin rtfpahdyfk dtggdgqdsl ykickaysvy deeigycqgq
      661 sflaavlllh mpeeqafsvl vkimfdyglr elfkqnfedl hckfyqlerl mqeyipdlyn
      721 hfldisleah myasqwfltl ftakfplymv fhiidlllce gisvifnval gllktskddl
      781 lltdfegalk ffrvqlpkry rseenakklm elacnmkisq kklkkyekey htmreqqaqq
      841 edpierfere nrrlqeanmr leqenddlah elvtskialr kdldnaeeka dalnkellmt
      901 kqklidaeee krrleeesaq lkemcrreld kaeseikkns siigdykqic sqlserlekq
      961 qtankveiek irqkvddcer creffnkegr vkgtgytked vdedtdeeke tlknqlreme
     1021 lelaqtklql veaeckiqdl ehhlglalne vqaakktwfn rtlssiktat gvqgketc
//
LOCUS       XP_061010689            1069 aa            linear   MAM 02-DEC-2023
DEFINITION  rab GTPase-activating protein 1 isoform X4 [Dama dama].
ACCESSION   XP_061010689
VERSION     XP_061010689.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154706.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1069
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1069
                     /product="rab GTPase-activating protein 1 isoform X4"
                     /calculated_mol_wt=121640
     Region          145..273
                     /region_name="PTB_Rab6GAP"
                     /note="GTPase activating protein for Rab 6
                     Phosphotyrosine-binding (PTB) domain; cd01211"
                     /db_xref="CDD:269922"
     Site            order(151,229,249)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269922"
     Site            order(215..220,236,257,261)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269922"
     Region          307..437
                     /region_name="DUF3694"
                     /note="Kinesin protein; pfam12473"
                     /db_xref="CDD:463599"
     Region          563..772
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     Region          <825..>1047
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1069
                     /gene="RABGAP1"
                     /coded_by="XM_061154706.1:314..3523"
                     /db_xref="GeneID:133064501"
ORIGIN      
        1 mddkasvgki svssdsvstl nsedfvlvsr qgdetpstnn gsddektglk iigngseqql
       61 qkeladvlmd ppmddqpgdk elversqldg egdgplsnql sasstinpvs lvglqkpems
      121 lpvkpgqgds ersspftpva dedsvvfskl tylgcasvna prsevealrm msilrgqcqi
      181 sldvtlsvpn vsegtvrlld pqtnteiany piykilfcvr ghdgtpesdc fafteshyna
      241 elfrihvfrc eiqeavsril ysfatafrrs akqtplsata apqtpdsdif tfsvsleike
      301 ddgkgyfsav pkdkdrqcfk lrqgidkkiv iyvqqttnke laiercfgll lspgkdvrns
      361 dmhlldlesm gkssdgksyv itgswnpksp hfqvvneetp kdkvlfmtta vdlvitevqe
      421 pvrflletkv rvcspnerlf wpfskrstte nfflklkqik qkerknntdt lyevvclese
      481 sererrktta spsirlpqsg sqssmipspp eddeeednde pllsgsgdvs kecaekilet
      541 wgellskwhl nlsvrpkqls slvrsgvpea lrgevwqlla gchnndhlve kyrilitkes
      601 pqdsaitrdi nrtfpahdyf kdtggdgqds lykickaysv ydeeigycqg qsflaavlll
      661 hmpeeqafsv lvkimfdygl relfkqnfed lhckfyqler lmqeyipdly nhfldislea
      721 hmyasqwflt lftakfplym vfhiidlllc egisvifnva lgllktskdd llltdfegal
      781 kffrvqlpkr yrseenakkl melacnmkis qkklkkyeke yhtmreqqaq qedpierfer
      841 enrrlqeanm rleqenddla helvtskial rkdldnaeek adalnkellm tkqklidaee
      901 ekrrleeesa qlkemcrrel dkaeseikkn ssiigdykqi csqlserlek qqtankveie
      961 kirqkvddce rcreffnkeg rvkgtgytke dvdedtdeek etlknqlrem elelaqtklq
     1021 lveaeckiqd lehhlglaln evqaakktwf nrtlssikta tgvqgketc
//
LOCUS       XP_061010690            1066 aa            linear   MAM 02-DEC-2023
DEFINITION  rab GTPase-activating protein 1 isoform X5 [Dama dama].
ACCESSION   XP_061010690
VERSION     XP_061010690.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154707.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1066
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1066
                     /product="rab GTPase-activating protein 1 isoform X5"
                     /calculated_mol_wt=121753
     Region          77..214
                     /region_name="PTB_Rab6GAP"
                     /note="GTPase activating protein for Rab 6
                     Phosphotyrosine-binding (PTB) domain; cd01211"
                     /db_xref="CDD:269922"
     Site            order(83,170,190)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269922"
     Site            order(156..161,177,198,202)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269922"
     Region          248..378
                     /region_name="DUF3694"
                     /note="Kinesin protein; pfam12473"
                     /db_xref="CDD:463599"
     Region          601..769
                     /region_name="RabGAP-TBC"
                     /note="Rab-GTPase-TBC domain; pfam00566"
                     /db_xref="CDD:459855"
     Region          <822..>1044
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1066
                     /gene="RABGAP1"
                     /coded_by="XM_061154707.1:187..3387"
                     /db_xref="GeneID:133064501"
ORIGIN      
        1 mdppmddqpg dkelversql dgegdgplsn qlsasstinp vslvglqkpe mslpvkpgqg
       61 dsersspftp vadedsvvfs kltylgcasv naprseveal rmmsilrgqc qisldvtlsv
      121 pnvsegtvra qdeawnvvll dpqtnteian ypiykilfcv rghdgtpesd cfafteshyn
      181 aelfrihvfr ceiqeavsri lysfatafrr sakqtplsat aapqtpdsdi ftfsvsleik
      241 eddgkgyfsa vpkdkdrqcf klrqgidkki viyvqqttnk elaiercfgl llspgkdvrn
      301 sdmhlldles mgkssdgksy vitgswnpks phfqvvneet pkdkvlfmtt avdlvitevq
      361 epvrflletk vrvcspnerl fwpfskrstt enfflklkqi kqkerknntd tlyevvcles
      421 esererrktt aspsirlpqs gsqssmipsp peddeeednd epllsgsgdv skecaekile
      481 twgellskwh lnlsvrpkql sslvrsgvpe alrgevwqll agchnndhlv ekyrilitks
      541 lrhvrlfasp wtiahqapls lkffrqeyws glpfhspgdl pdpkikptss aspalespqd
      601 saitrdinrt fpahdyfkdt ggdgqdslyk ickaysvyde eigycqgqsf laavlllhmp
      661 eeqafsvlvk imfdyglrel fkqnfedlhc kfyqlerlmq eyipdlynhf ldisleahmy
      721 asqwfltlft akfplymvfh iidlllcegi svifnvalgl lktskddlll tdfegalkff
      781 rvqlpkryrs eenakklmel acnmkisqkk lkkyekeyht mreqqaqqed pierferenr
      841 rlqeanmrle qenddlahel vtskialrkd ldnaeekada lnkellmtkq klidaeeekr
      901 rleeesaqlk emcrreldka eseikknssi igdykqicsq lserlekqqt ankveiekir
      961 qkvddcercr effnkegrvk gtgytkedvd edtdeeketl knqlremele laqtklqlve
     1021 aeckiqdleh hlglalnevq aakktwfnrt lssiktatgv qgketc
//
LOCUS       XP_061010691             965 aa            linear   MAM 02-DEC-2023
DEFINITION  rab GTPase-activating protein 1 isoform X6 [Dama dama].
ACCESSION   XP_061010691
VERSION     XP_061010691.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154708.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..965
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..965
                     /product="rab GTPase-activating protein 1 isoform X6"
                     /calculated_mol_wt=111070
     Region          1..113
                     /region_name="PTB_Rab6GAP"
                     /note="GTPase activating protein for Rab 6
                     Phosphotyrosine-binding (PTB) domain; cd01211"
                     /db_xref="CDD:269922"
     Site            order(55..60,76,97,101)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269922"
     Region          147..277
                     /region_name="DUF3694"
                     /note="Kinesin protein; pfam12473"
                     /db_xref="CDD:463599"
     Region          500..668
                     /region_name="RabGAP-TBC"
                     /note="Rab-GTPase-TBC domain; pfam00566"
                     /db_xref="CDD:459855"
     Region          <721..>943
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..965
                     /gene="RABGAP1"
                     /coded_by="XM_061154708.1:254..3151"
                     /db_xref="GeneID:133064501"
ORIGIN      
        1 mmsilrgqcq isldvtlsvp nvsegtvraq deawnvvlld pqtnteiany piykilfcvr
       61 ghdgtpesdc fafteshyna elfrihvfrc eiqeavsril ysfatafrrs akqtplsata
      121 apqtpdsdif tfsvsleike ddgkgyfsav pkdkdrqcfk lrqgidkkiv iyvqqttnke
      181 laiercfgll lspgkdvrns dmhlldlesm gkssdgksyv itgswnpksp hfqvvneetp
      241 kdkvlfmtta vdlvitevqe pvrflletkv rvcspnerlf wpfskrstte nfflklkqik
      301 qkerknntdt lyevvclese sererrktta spsirlpqsg sqssmipspp eddeeednde
      361 pllsgsgdvs kecaekilet wgellskwhl nlsvrpkqls slvrsgvpea lrgevwqlla
      421 gchnndhlve kyrilitksl rhvrlfaspw tiahqaplsl kffrqeywsg lpfhspgdlp
      481 dpkikptssa spalespqds aitrdinrtf pahdyfkdtg gdgqdslyki ckaysvydee
      541 igycqgqsfl aavlllhmpe eqafsvlvki mfdyglrelf kqnfedlhck fyqlerlmqe
      601 yipdlynhfl disleahmya sqwfltlfta kfplymvfhi idlllcegis vifnvalgll
      661 ktskddlllt dfegalkffr vqlpkryrse enakklmela cnmkisqkkl kkyekeyhtm
      721 reqqaqqedp ierferenrr lqeanmrleq enddlahelv tskialrkdl dnaeekadal
      781 nkellmtkqk lidaeeekrr leeesaqlke mcrreldkae seikknssii gdykqicsql
      841 serlekqqta nkveiekirq kvddcercre ffnkegrvkg tgytkedvde dtdeeketlk
      901 nqlremelel aqtklqlvea eckiqdlehh lglalnevqa akktwfnrtl ssiktatgvq
      961 gketc
//
LOCUS       XP_061010692             965 aa            linear   MAM 02-DEC-2023
DEFINITION  rab GTPase-activating protein 1 isoform X6 [Dama dama].
ACCESSION   XP_061010692
VERSION     XP_061010692.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154709.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..965
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..965
                     /product="rab GTPase-activating protein 1 isoform X6"
                     /calculated_mol_wt=111070
     Region          1..113
                     /region_name="PTB_Rab6GAP"
                     /note="GTPase activating protein for Rab 6
                     Phosphotyrosine-binding (PTB) domain; cd01211"
                     /db_xref="CDD:269922"
     Site            order(55..60,76,97,101)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269922"
     Region          147..277
                     /region_name="DUF3694"
                     /note="Kinesin protein; pfam12473"
                     /db_xref="CDD:463599"
     Region          500..668
                     /region_name="RabGAP-TBC"
                     /note="Rab-GTPase-TBC domain; pfam00566"
                     /db_xref="CDD:459855"
     Region          <721..>943
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..965
                     /gene="RABGAP1"
                     /coded_by="XM_061154709.1:243..3140"
                     /db_xref="GeneID:133064501"
ORIGIN      
        1 mmsilrgqcq isldvtlsvp nvsegtvraq deawnvvlld pqtnteiany piykilfcvr
       61 ghdgtpesdc fafteshyna elfrihvfrc eiqeavsril ysfatafrrs akqtplsata
      121 apqtpdsdif tfsvsleike ddgkgyfsav pkdkdrqcfk lrqgidkkiv iyvqqttnke
      181 laiercfgll lspgkdvrns dmhlldlesm gkssdgksyv itgswnpksp hfqvvneetp
      241 kdkvlfmtta vdlvitevqe pvrflletkv rvcspnerlf wpfskrstte nfflklkqik
      301 qkerknntdt lyevvclese sererrktta spsirlpqsg sqssmipspp eddeeednde
      361 pllsgsgdvs kecaekilet wgellskwhl nlsvrpkqls slvrsgvpea lrgevwqlla
      421 gchnndhlve kyrilitksl rhvrlfaspw tiahqaplsl kffrqeywsg lpfhspgdlp
      481 dpkikptssa spalespqds aitrdinrtf pahdyfkdtg gdgqdslyki ckaysvydee
      541 igycqgqsfl aavlllhmpe eqafsvlvki mfdyglrelf kqnfedlhck fyqlerlmqe
      601 yipdlynhfl disleahmya sqwfltlfta kfplymvfhi idlllcegis vifnvalgll
      661 ktskddlllt dfegalkffr vqlpkryrse enakklmela cnmkisqkkl kkyekeyhtm
      721 reqqaqqedp ierferenrr lqeanmrleq enddlahelv tskialrkdl dnaeekadal
      781 nkellmtkqk lidaeeekrr leeesaqlke mcrreldkae seikknssii gdykqicsql
      841 serlekqqta nkveiekirq kvddcercre ffnkegrvkg tgytkedvde dtdeeketlk
      901 nqlremelel aqtklqlvea eckiqdlehh lglalnevqa akktwfnrtl ssiktatgvq
      961 gketc
//
LOCUS       XP_061010693             602 aa            linear   MAM 02-DEC-2023
DEFINITION  rab GTPase-activating protein 1 isoform X7 [Dama dama].
ACCESSION   XP_061010693
VERSION     XP_061010693.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154710.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..602
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..602
                     /product="rab GTPase-activating protein 1 isoform X7"
                     /calculated_mol_wt=69932
     Region          137..305
                     /region_name="RabGAP-TBC"
                     /note="Rab-GTPase-TBC domain; pfam00566"
                     /db_xref="CDD:459855"
     Region          <358..>580
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..602
                     /gene="RABGAP1"
                     /coded_by="XM_061154710.1:16..1824"
                     /db_xref="GeneID:133064501"
ORIGIN      
        1 mpervrahgv fffplprlfl fpsplfslfl llllyplplc lssavneaea hscfarlsak
       61 dvlwllfglq haelqslrhv rlfaspwtia hqaplslkff rqeywsglpf hspgdlpdpk
      121 ikptssaspa lespqdsait rdinrtfpah dyfkdtggdg qdslykicka ysvydeeigy
      181 cqgqsflaav lllhmpeeqa fsvlvkimfd yglrelfkqn fedlhckfyq lerlmqeyip
      241 dlynhfldis leahmyasqw fltlftakfp lymvfhiidl llcegisvif nvalgllkts
      301 kddllltdfe galkffrvql pkryrseena kklmelacnm kisqkklkky ekeyhtmreq
      361 qaqqedpier ferenrrlqe anmrleqend dlahelvtsk ialrkdldna eekadalnke
      421 llmtkqklid aeeekrrlee esaqlkemcr reldkaesei kknssiigdy kqicsqlser
      481 lekqqtankv eiekirqkvd dcercreffn kegrvkgtgy tkedvdedtd eeketlknql
      541 remelelaqt klqlveaeck iqdlehhlgl alnevqaakk twfnrtlssi ktatgvqgke
      601 tc
//
LOCUS       XP_061010694             447 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger and BTB domain-containing protein 26 isoform X1 [Dama
            dama].
ACCESSION   XP_061010694
VERSION     XP_061010694.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154711.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..447
                     /product="zinc finger and BTB domain-containing protein 26
                     isoform X1"
                     /calculated_mol_wt=50533
     Region          14..135
                     /region_name="BTB_POZ_ZBTB26_Bioref"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in zinc finger and
                     BTB domain-containing protein 26 (ZBTB26); cd18214"
                     /db_xref="CDD:349523"
     Region          <275..>387
                     /region_name="COG5236"
                     /note="Uncharacterized conserved protein, contains RING
                     Zn-finger [General function prediction only]"
                     /db_xref="CDD:227561"
     Region          281..301
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          304..326
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          306..326
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(311,313,315,317..318,321..322,325,339,341,345..346,
                     349..350,353,367,369,371,373..374,377..378)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          318..343
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          334..354
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          362..380
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..447
                     /gene="ZBTB26"
                     /coded_by="XM_061154711.1:2517..3860"
                     /db_xref="GeneID:133064504"
ORIGIN      
        1 mnrsakmser sdllhfkfen ygdsmlqkmn klreenkfcd vtvliddiev qghkivfaag
       61 spflrdqfll ndsrevkisi lqssevgrql llscysgvle fpemelvnyl taasflqmsh
      121 iverctqalw kfikpkqpme skegcepqsa spqskehqgd argspkqdsp cihpsedsmd
      181 medsdiqivk vesigdvsev rskkdqnqfi sseptalhss epqhslinst venrvseieq
      241 nhlhnyalsy tgsdniimas kdvfgpnirg vdkglqwhhq cpkctrvfrh lenyanhlkm
      301 hklfmcllcg ktftqkgnlh rhmrvhagik pfqckicgkt fsqkcslqdh lnlhsgdkph
      361 kcnycdmvfa hkpvlrkhlk qlhgknsfdn anernvqdlt vdfdsfactt vtdskgcqpq
      421 pdatqvldag klaqavlnlr ndstcvn
//
LOCUS       XP_061010695             441 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger and BTB domain-containing protein 26 isoform X2 [Dama
            dama].
ACCESSION   XP_061010695
VERSION     XP_061010695.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154712.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..441
                     /product="zinc finger and BTB domain-containing protein 26
                     isoform X2"
                     /calculated_mol_wt=49845
     Region          8..129
                     /region_name="BTB_POZ_ZBTB26_Bioref"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in zinc finger and
                     BTB domain-containing protein 26 (ZBTB26); cd18214"
                     /db_xref="CDD:349523"
     Region          <269..>381
                     /region_name="COG5236"
                     /note="Uncharacterized conserved protein, contains RING
                     Zn-finger [General function prediction only]"
                     /db_xref="CDD:227561"
     Region          275..295
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          298..320
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          300..320
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(305,307,309,311..312,315..316,319,333,335,339..340,
                     343..344,347,361,363,365,367..368,371..372)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          312..337
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          328..348
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          356..374
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..441
                     /gene="ZBTB26"
                     /coded_by="XM_061154712.1:2700..4025"
                     /db_xref="GeneID:133064504"
ORIGIN      
        1 msersdllhf kfenygdsml qkmnklreen kfcdvtvlid dievqghkiv faagspflrd
       61 qfllndsrev kisilqssev grqlllscys gvlefpemel vnyltaasfl qmshiverct
      121 qalwkfikpk qpmeskegce pqsaspqske hqgdargspk qdspcihpse dsmdmedsdi
      181 qivkvesigd vsevrskkdq nqfissepta lhssepqhsl instvenrvs eieqnhlhny
      241 alsytgsdni imaskdvfgp nirgvdkglq whhqcpkctr vfrhlenyan hlkmhklfmc
      301 llcgktftqk gnlhrhmrvh agikpfqcki cgktfsqkcs lqdhlnlhsg dkphkcnycd
      361 mvfahkpvlr khlkqlhgkn sfdnanernv qdltvdfdsf acttvtdskg cqpqpdatqv
      421 ldagklaqav lnlrndstcv n
//
LOCUS       XP_061010696             441 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger and BTB domain-containing protein 26 isoform X2 [Dama
            dama].
ACCESSION   XP_061010696
VERSION     XP_061010696.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154713.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..441
                     /product="zinc finger and BTB domain-containing protein 26
                     isoform X2"
                     /calculated_mol_wt=49845
     Region          8..129
                     /region_name="BTB_POZ_ZBTB26_Bioref"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in zinc finger and
                     BTB domain-containing protein 26 (ZBTB26); cd18214"
                     /db_xref="CDD:349523"
     Region          <269..>381
                     /region_name="COG5236"
                     /note="Uncharacterized conserved protein, contains RING
                     Zn-finger [General function prediction only]"
                     /db_xref="CDD:227561"
     Region          275..295
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          298..320
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          300..320
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(305,307,309,311..312,315..316,319,333,335,339..340,
                     343..344,347,361,363,365,367..368,371..372)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          312..337
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          328..348
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          356..374
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..441
                     /gene="ZBTB26"
                     /coded_by="XM_061154713.1:1222..2547"
                     /db_xref="GeneID:133064504"
ORIGIN      
        1 msersdllhf kfenygdsml qkmnklreen kfcdvtvlid dievqghkiv faagspflrd
       61 qfllndsrev kisilqssev grqlllscys gvlefpemel vnyltaasfl qmshiverct
      121 qalwkfikpk qpmeskegce pqsaspqske hqgdargspk qdspcihpse dsmdmedsdi
      181 qivkvesigd vsevrskkdq nqfissepta lhssepqhsl instvenrvs eieqnhlhny
      241 alsytgsdni imaskdvfgp nirgvdkglq whhqcpkctr vfrhlenyan hlkmhklfmc
      301 llcgktftqk gnlhrhmrvh agikpfqcki cgktfsqkcs lqdhlnlhsg dkphkcnycd
      361 mvfahkpvlr khlkqlhgkn sfdnanernv qdltvdfdsf acttvtdskg cqpqpdatqv
      421 ldagklaqav lnlrndstcv n
//
LOCUS       XP_061010697             441 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger and BTB domain-containing protein 26 isoform X2 [Dama
            dama].
ACCESSION   XP_061010697
VERSION     XP_061010697.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154714.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..441
                     /product="zinc finger and BTB domain-containing protein 26
                     isoform X2"
                     /calculated_mol_wt=49845
     Region          8..129
                     /region_name="BTB_POZ_ZBTB26_Bioref"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in zinc finger and
                     BTB domain-containing protein 26 (ZBTB26); cd18214"
                     /db_xref="CDD:349523"
     Region          <269..>381
                     /region_name="COG5236"
                     /note="Uncharacterized conserved protein, contains RING
                     Zn-finger [General function prediction only]"
                     /db_xref="CDD:227561"
     Region          275..295
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          298..320
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          300..320
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(305,307,309,311..312,315..316,319,333,335,339..340,
                     343..344,347,361,363,365,367..368,371..372)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          312..337
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          328..348
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          356..374
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..441
                     /gene="ZBTB26"
                     /coded_by="XM_061154714.1:134..1459"
                     /db_xref="GeneID:133064504"
ORIGIN      
        1 msersdllhf kfenygdsml qkmnklreen kfcdvtvlid dievqghkiv faagspflrd
       61 qfllndsrev kisilqssev grqlllscys gvlefpemel vnyltaasfl qmshiverct
      121 qalwkfikpk qpmeskegce pqsaspqske hqgdargspk qdspcihpse dsmdmedsdi
      181 qivkvesigd vsevrskkdq nqfissepta lhssepqhsl instvenrvs eieqnhlhny
      241 alsytgsdni imaskdvfgp nirgvdkglq whhqcpkctr vfrhlenyan hlkmhklfmc
      301 llcgktftqk gnlhrhmrvh agikpfqcki cgktfsqkcs lqdhlnlhsg dkphkcnycd
      361 mvfahkpvlr khlkqlhgkn sfdnanernv qdltvdfdsf acttvtdskg cqpqpdatqv
      421 ldagklaqav lnlrndstcv n
//
LOCUS       XP_061010698             441 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger and BTB domain-containing protein 26 isoform X2 [Dama
            dama].
ACCESSION   XP_061010698
VERSION     XP_061010698.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154715.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..441
                     /product="zinc finger and BTB domain-containing protein 26
                     isoform X2"
                     /calculated_mol_wt=49845
     Region          8..129
                     /region_name="BTB_POZ_ZBTB26_Bioref"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in zinc finger and
                     BTB domain-containing protein 26 (ZBTB26); cd18214"
                     /db_xref="CDD:349523"
     Region          <269..>381
                     /region_name="COG5236"
                     /note="Uncharacterized conserved protein, contains RING
                     Zn-finger [General function prediction only]"
                     /db_xref="CDD:227561"
     Region          275..295
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          298..320
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          300..320
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(305,307,309,311..312,315..316,319,333,335,339..340,
                     343..344,347,361,363,365,367..368,371..372)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          312..337
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          328..348
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          356..374
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..441
                     /gene="ZBTB26"
                     /coded_by="XM_061154715.1:26..1351"
                     /db_xref="GeneID:133064504"
ORIGIN      
        1 msersdllhf kfenygdsml qkmnklreen kfcdvtvlid dievqghkiv faagspflrd
       61 qfllndsrev kisilqssev grqlllscys gvlefpemel vnyltaasfl qmshiverct
      121 qalwkfikpk qpmeskegce pqsaspqske hqgdargspk qdspcihpse dsmdmedsdi
      181 qivkvesigd vsevrskkdq nqfissepta lhssepqhsl instvenrvs eieqnhlhny
      241 alsytgsdni imaskdvfgp nirgvdkglq whhqcpkctr vfrhlenyan hlkmhklfmc
      301 llcgktftqk gnlhrhmrvh agikpfqcki cgktfsqkcs lqdhlnlhsg dkphkcnycd
      361 mvfahkpvlr khlkqlhgkn sfdnanernv qdltvdfdsf acttvtdskg cqpqpdatqv
      421 ldagklaqav lnlrndstcv n
//
LOCUS       XP_061010699             441 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger and BTB domain-containing protein 26 isoform X2 [Dama
            dama].
ACCESSION   XP_061010699
VERSION     XP_061010699.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154716.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..441
                     /product="zinc finger and BTB domain-containing protein 26
                     isoform X2"
                     /calculated_mol_wt=49845
     Region          8..129
                     /region_name="BTB_POZ_ZBTB26_Bioref"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in zinc finger and
                     BTB domain-containing protein 26 (ZBTB26); cd18214"
                     /db_xref="CDD:349523"
     Region          <269..>381
                     /region_name="COG5236"
                     /note="Uncharacterized conserved protein, contains RING
                     Zn-finger [General function prediction only]"
                     /db_xref="CDD:227561"
     Region          275..295
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          298..320
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          300..320
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(305,307,309,311..312,315..316,319,333,335,339..340,
                     343..344,347,361,363,365,367..368,371..372)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          312..337
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          328..348
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          356..374
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..441
                     /gene="ZBTB26"
                     /coded_by="XM_061154716.1:318..1643"
                     /db_xref="GeneID:133064504"
ORIGIN      
        1 msersdllhf kfenygdsml qkmnklreen kfcdvtvlid dievqghkiv faagspflrd
       61 qfllndsrev kisilqssev grqlllscys gvlefpemel vnyltaasfl qmshiverct
      121 qalwkfikpk qpmeskegce pqsaspqske hqgdargspk qdspcihpse dsmdmedsdi
      181 qivkvesigd vsevrskkdq nqfissepta lhssepqhsl instvenrvs eieqnhlhny
      241 alsytgsdni imaskdvfgp nirgvdkglq whhqcpkctr vfrhlenyan hlkmhklfmc
      301 llcgktftqk gnlhrhmrvh agikpfqcki cgktfsqkcs lqdhlnlhsg dkphkcnycd
      361 mvfahkpvlr khlkqlhgkn sfdnanernv qdltvdfdsf acttvtdskg cqpqpdatqv
      421 ldagklaqav lnlrndstcv n
//
LOCUS       XP_061010700             441 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger and BTB domain-containing protein 26 isoform X2 [Dama
            dama].
ACCESSION   XP_061010700
VERSION     XP_061010700.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154717.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..441
                     /product="zinc finger and BTB domain-containing protein 26
                     isoform X2"
                     /calculated_mol_wt=49845
     Region          8..129
                     /region_name="BTB_POZ_ZBTB26_Bioref"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in zinc finger and
                     BTB domain-containing protein 26 (ZBTB26); cd18214"
                     /db_xref="CDD:349523"
     Region          <269..>381
                     /region_name="COG5236"
                     /note="Uncharacterized conserved protein, contains RING
                     Zn-finger [General function prediction only]"
                     /db_xref="CDD:227561"
     Region          275..295
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          298..320
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          300..320
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(305,307,309,311..312,315..316,319,333,335,339..340,
                     343..344,347,361,363,365,367..368,371..372)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          312..337
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          328..348
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          356..374
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..441
                     /gene="ZBTB26"
                     /coded_by="XM_061154717.1:254..1579"
                     /db_xref="GeneID:133064504"
ORIGIN      
        1 msersdllhf kfenygdsml qkmnklreen kfcdvtvlid dievqghkiv faagspflrd
       61 qfllndsrev kisilqssev grqlllscys gvlefpemel vnyltaasfl qmshiverct
      121 qalwkfikpk qpmeskegce pqsaspqske hqgdargspk qdspcihpse dsmdmedsdi
      181 qivkvesigd vsevrskkdq nqfissepta lhssepqhsl instvenrvs eieqnhlhny
      241 alsytgsdni imaskdvfgp nirgvdkglq whhqcpkctr vfrhlenyan hlkmhklfmc
      301 llcgktftqk gnlhrhmrvh agikpfqcki cgktfsqkcs lqdhlnlhsg dkphkcnycd
      361 mvfahkpvlr khlkqlhgkn sfdnanernv qdltvdfdsf acttvtdskg cqpqpdatqv
      421 ldagklaqav lnlrndstcv n
//
LOCUS       XP_061010701             424 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger and BTB domain-containing protein 6 [Dama dama].
ACCESSION   XP_061010701
VERSION     XP_061010701.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154718.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..424
                     /product="zinc finger and BTB domain-containing protein 6"
                     /calculated_mol_wt=48146
     Region          8..123
                     /region_name="BTB_POZ_ZBTB6"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in zinc finger and
                     BTB domain-containing protein 6 (ZBTB6); cd18197"
                     /db_xref="CDD:349506"
     Region          303..323
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          326..348
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          328..348
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(333,335,337,339..340,343..344,347,361,363,367..368,
                     371..372,375,389,391,393,395..396,399..400)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          340..364
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          356..376
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          384..401
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..424
                     /gene="ZBTB6"
                     /coded_by="XM_061154718.1:135..1409"
                     /db_xref="GeneID:133064505"
ORIGIN      
        1 maaesdvlhf qfeqqgdvvl qkmnllrqqn lfcdvsiyin dtefqghkvi laacstfmrd
       61 qflltqskhv ritilqsaev grklllscyt galevkrkel lkyltaasyl qmvhivekct
      121 ealskyleid lsmknnnqha dlcqssdpdv knedensdkd ceiieiseds pvnidfhvke
      181 eesnvlqstv esltaereem rspelssvdm gfkdneiril hvesistggv engkfsqpct
      241 sskasmyfse tqhslinstv esrvaevpgn qdqglfcent egshgpvnev qnlgdafslr
      301 hqcprcprgf lhvenylrhl kmhklflclq cgktftqkkn lnrhirghmg irpfqctvcl
      361 ktftakstlq dhlnihsgdr pykchccdmd fkhksalkkh ltslhgrssg eklprhdler
      421 qnll
//
LOCUS       XP_061010702             424 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger and BTB domain-containing protein 6 [Dama dama].
ACCESSION   XP_061010702
VERSION     XP_061010702.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154719.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..424
                     /product="zinc finger and BTB domain-containing protein 6"
                     /calculated_mol_wt=48146
     Region          8..123
                     /region_name="BTB_POZ_ZBTB6"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in zinc finger and
                     BTB domain-containing protein 6 (ZBTB6); cd18197"
                     /db_xref="CDD:349506"
     Region          303..323
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          326..348
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          328..348
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(333,335,337,339..340,343..344,347,361,363,367..368,
                     371..372,375,389,391,393,395..396,399..400)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          340..364
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          356..376
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          384..401
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..424
                     /gene="ZBTB6"
                     /coded_by="XM_061154719.1:339..1613"
                     /db_xref="GeneID:133064505"
ORIGIN      
        1 maaesdvlhf qfeqqgdvvl qkmnllrqqn lfcdvsiyin dtefqghkvi laacstfmrd
       61 qflltqskhv ritilqsaev grklllscyt galevkrkel lkyltaasyl qmvhivekct
      121 ealskyleid lsmknnnqha dlcqssdpdv knedensdkd ceiieiseds pvnidfhvke
      181 eesnvlqstv esltaereem rspelssvdm gfkdneiril hvesistggv engkfsqpct
      241 sskasmyfse tqhslinstv esrvaevpgn qdqglfcent egshgpvnev qnlgdafslr
      301 hqcprcprgf lhvenylrhl kmhklflclq cgktftqkkn lnrhirghmg irpfqctvcl
      361 ktftakstlq dhlnihsgdr pykchccdmd fkhksalkkh ltslhgrssg eklprhdler
      421 qnll
//
LOCUS       XP_061010703             349 aa            linear   MAM 02-DEC-2023
DEFINITION  probable G-protein coupled receptor 21 [Dama dama].
ACCESSION   XP_061010703
VERSION     XP_061010703.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154720.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..349
                     /product="probable G-protein coupled receptor 21"
                     /calculated_mol_wt=39469
     Region          31..308
                     /region_name="7tm_classA_rhodopsin-like"
                     /note="rhodopsin receptor-like class A family of the
                     seven-transmembrane G protein-coupled receptor
                     superfamily; cd00637"
                     /db_xref="CDD:410626"
     Region          31..56
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410626"
     Region          64..90
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410626"
     Site            order(86,89..90,102..107,109..110,113,158,160..164,188,
                     191..193,195..197,199..200,265,268..269,271..272,275,283,
                     285..287,290,293..294)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:410626"
     Region          102..132
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410626"
     Region          145..164
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410626"
     Region          188..213
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410626"
     Region          239..275
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410626"
     Region          283..308
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410626"
     CDS             1..349
                     /gene="GPR21"
                     /coded_by="XM_061154720.1:537..1586"
                     /db_xref="GeneID:133064506"
ORIGIN      
        1 mnstldgnqs shsfcllafg yletvnfcll evliivfltv liisgniivi fvfhcaplln
       61 hhttsyfiqt mayadllvgv sclvpslsll hyslpveesl tcqvfgfvvs vlksvsmasl
      121 acisidryia itkpltyntl vtpwrlrlci fliwlystlv flpsffhwgk pgyhgdvfqw
      181 caeswhtdpy ftlfivmmly apaalivcft yfnifricqq htkeinerqa rfssqsgetg
      241 evqacsdkry amvlfritsv fyilwlpyii yfllesstgh snrfasfltt wlaisnsfcn
      301 cviyslsnsv fqrglkrlsg amctscasqm vakdpytvrs kgplngfhv
//
LOCUS       XP_061010704            1189 aa            linear   MAM 02-DEC-2023
DEFINITION  roquin-2 isoform X1 [Dama dama].
ACCESSION   XP_061010704
VERSION     XP_061010704.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154721.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1189
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1189
                     /product="roquin-2 isoform X1"
                     /calculated_mol_wt=131297
     Region          7..55
                     /region_name="mRING-HC-C3HC3D_Roquin2"
                     /note="Modified RING finger, HC subclass (C3HC3D-type),
                     found in Roquin-2; cd16782"
                     /db_xref="CDD:438437"
     Region          268..323
                     /region_name="ROQ_II"
                     /note="Roquin II domain; pfam18386"
                     /db_xref="CDD:436456"
     Region          411..437
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     Region          <536..798
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     CDS             1..1189
                     /gene="RC3H2"
                     /coded_by="XM_061154721.1:294..3863"
                     /db_xref="GeneID:133064507"
ORIGIN      
        1 mpvqaaqwte flscpicyne fdenvhkpis lgcshtvckt clnklhrkac pfdqtaintd
       61 idvlpvnfal lqlvgaqvpd hqsvklsnlg enkhyevakk cvedlalylk plsggkgvas
      121 lnqsalsrpm qrklvtlvnc qlveeegrvr airaarslge rtvtelilqh qnpqqlsanl
      181 waavrargcq flgpamqeea lklvllaled gsalsrkvlv lfvvqrlepr fpqasktsig
      241 hvvqllyras cfkvtkrded sslmqlkeef rsyealrreh daqivhiame aglrispeqw
      301 ssllygdlah kshmqsiidk lqspesfaks vqeltivlqr tgdpanlnrl rphlellani
      361 dpnpdavspt weqlenamva vktvvhglvd fiqnysrkgh etpqpqpnsk yktsmcrdlr
      421 qqggcprgtn ctfahsqeel ekyrlrnkki natvrtfpll nkvgvnntvt ttagnvisvi
      481 gstettgkiv pstngisnae nsvsqliprs tdstlralet vkkvgkvgtn gqnaagpsae
      541 svtenkigsp pktpvsnvaa tsagptnagt elnsvppkss pfitrvpvyp qhseniqyfq
      601 dprtqipfev pqypqtgyyp ppptvpagva pcvprfvrsn nvpesslppa smpyadhyst
      661 fsprdrmnss pyqppppqpy gpvppvpsgm yapvydsrri wrppmyqrdd iirsnslppm
      721 dvmhssvyqt slrerynsld gyysvacqpp seprttvplp repcghlkts ceeqirrkpe
      781 qwaqyhtqka plvsstlpva tqsptppspl fsvdfrtdfs esvsgtkfee dhlshyspws
      841 cgtigscina idseprdvia nsnavlmdld sgdvkrrvhl fetqrrtkee dpiipfsdgp
      901 iiskwgaisr ssrtgyhttd pvqatasqgs atkpisvsdy vpyvnavdsr wssygneats
      961 sahyierdrf ivtdlsghrk hsstgdllsi elqqaksnsl llqreanala mqqkwnslde
     1021 grhltlnlls keielrnges dytedaadtk pdrdielels aldtdepdgq geqieeildi
     1081 plgissqndq llngtaveng hpvqqhqeep leqsrqslge drvileeqkt ilpvtscfsq
     1141 plpvsisnas glpittsvsv gnlilkthvm sedkndflks vangkmvns
//
LOCUS       XP_061010705            1132 aa            linear   MAM 02-DEC-2023
DEFINITION  roquin-2 isoform X2 [Dama dama].
ACCESSION   XP_061010705
VERSION     XP_061010705.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154722.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1132
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1132
                     /product="roquin-2 isoform X2"
                     /calculated_mol_wt=124892
     Region          7..55
                     /region_name="mRING-HC-C3HC3D_Roquin2"
                     /note="Modified RING finger, HC subclass (C3HC3D-type),
                     found in Roquin-2; cd16782"
                     /db_xref="CDD:438437"
     Region          268..323
                     /region_name="ROQ_II"
                     /note="Roquin II domain; pfam18386"
                     /db_xref="CDD:436456"
     Region          411..437
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     Region          <530..>766
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     CDS             1..1132
                     /gene="RC3H2"
                     /coded_by="XM_061154722.1:294..3692"
                     /db_xref="GeneID:133064507"
ORIGIN      
        1 mpvqaaqwte flscpicyne fdenvhkpis lgcshtvckt clnklhrkac pfdqtaintd
       61 idvlpvnfal lqlvgaqvpd hqsvklsnlg enkhyevakk cvedlalylk plsggkgvas
      121 lnqsalsrpm qrklvtlvnc qlveeegrvr airaarslge rtvtelilqh qnpqqlsanl
      181 waavrargcq flgpamqeea lklvllaled gsalsrkvlv lfvvqrlepr fpqasktsig
      241 hvvqllyras cfkvtkrded sslmqlkeef rsyealrreh daqivhiame aglrispeqw
      301 ssllygdlah kshmqsiidk lqspesfaks vqeltivlqr tgdpanlnrl rphlellani
      361 dpnpdavspt weqlenamva vktvvhglvd fiqnysrkgh etpqpqpnsk yktsmcrdlr
      421 qqggcprgtn ctfahsqeel ekyrlrnkki natvrtfpll nkvgvnntvt ttagnvisvi
      481 gstettgkiv pstngisnae nsvsqliprs tdstlralet vkkvgkvgtn gqnaagpsae
      541 svtenkigsp pktpvsnvaa tsagptnagt elnsvppkss pfitrvpvyp qhseniqyfq
      601 dprtqipfev pqypqtgyyp ppptvpagva pcvprfvrsn nvpesslppa smpyadhyst
      661 fsprdrmnss pyqppppqpy gpvppvpsgm yapvydsrri wrppmyqrdd iirsnslppm
      721 dvmhssvyqt slrerynsld gyysvacqpp seprttvplp rfsesvsgtk feedhlshys
      781 pwscgtigsc inaidseprd viansnavlm dldsgdvkrr vhlfetqrrt keedpiipfs
      841 dgpiiskwga isrssrtgyh ttdpvqatas qgsatkpisv sdyvpyvnav dsrwssygne
      901 atssahyier drfivtdlsg hrkhsstgdl lsielqqaks nslllqrean alamqqkwns
      961 ldegrhltln llskeielrn gesdytedaa dtkpdrdiel elsaldtdep dgqgeqieei
     1021 ldiplgissq ndqllngtav enghpvqqhq eepleqsrqs lgedrvilee qktilpvtsc
     1081 fsqplpvsis nasglpitts vsvgnlilkt hvmsedkndf lksvangkmv ns
//
LOCUS       XP_061010706            1127 aa            linear   MAM 02-DEC-2023
DEFINITION  roquin-2 isoform X3 [Dama dama].
ACCESSION   XP_061010706
VERSION     XP_061010706.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154723.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1127
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1127
                     /product="roquin-2 isoform X3"
                     /calculated_mol_wt=124791
     Region          7..55
                     /region_name="mRING-HC-C3HC3D_Roquin2"
                     /note="Modified RING finger, HC subclass (C3HC3D-type),
                     found in Roquin-2; cd16782"
                     /db_xref="CDD:438437"
     Region          268..323
                     /region_name="ROQ_II"
                     /note="Roquin II domain; pfam18386"
                     /db_xref="CDD:436456"
     Region          411..437
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     Region          <536..798
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     CDS             1..1127
                     /gene="RC3H2"
                     /coded_by="XM_061154723.1:294..3677"
                     /db_xref="GeneID:133064507"
ORIGIN      
        1 mpvqaaqwte flscpicyne fdenvhkpis lgcshtvckt clnklhrkac pfdqtaintd
       61 idvlpvnfal lqlvgaqvpd hqsvklsnlg enkhyevakk cvedlalylk plsggkgvas
      121 lnqsalsrpm qrklvtlvnc qlveeegrvr airaarslge rtvtelilqh qnpqqlsanl
      181 waavrargcq flgpamqeea lklvllaled gsalsrkvlv lfvvqrlepr fpqasktsig
      241 hvvqllyras cfkvtkrded sslmqlkeef rsyealrreh daqivhiame aglrispeqw
      301 ssllygdlah kshmqsiidk lqspesfaks vqeltivlqr tgdpanlnrl rphlellani
      361 dpnpdavspt weqlenamva vktvvhglvd fiqnysrkgh etpqpqpnsk yktsmcrdlr
      421 qqggcprgtn ctfahsqeel ekyrlrnkki natvrtfpll nkvgvnntvt ttagnvisvi
      481 gstettgkiv pstngisnae nsvsqliprs tdstlralet vkkvgkvgtn gqnaagpsae
      541 svtenkigsp pktpvsnvaa tsagptnagt elnsvppkss pfitrvpvyp qhseniqyfq
      601 dprtqipfev pqypqtgyyp ppptvpagva pcvprfvrsn nvpesslppa smpyadhyst
      661 fsprdrmnss pyqppppqpy gpvppvpsgm yapvydsrri wrppmyqrdd iirsnslppm
      721 dvmhssvyqt slrerynsld gyysvacqpp seprttvplp repcghlkts ceeqirrkpe
      781 qwaqyhtqka plvsstlpva tqsptppspl fsvdfrtdfs esvsgtkfee dhlshyspws
      841 cgtigscina idseprdvia nsnavlmdld sgdvkrrvhl fetqrrtkee dpiipfsdgp
      901 iiskwgaisr ssrtgyhttd pvqatasqgs atkpisvsdy vpyvnavdsr wssygneats
      961 sahyierdrf ivtdlsghrk hsstgdllsi elqqaksnsl llqreanala mqqkwnslde
     1021 grhltlnlls keielrnges dytedaadtk pdrdielels aldtdepdgq geqieeildi
     1081 plgissqndq llngtaveng hpvqqhqeep leqsrqslgk skkqfcr
//
LOCUS       XP_061010707             301 aa            linear   MAM 02-DEC-2023
DEFINITION  phosducin-like protein [Dama dama].
ACCESSION   XP_061010707
VERSION     XP_061010707.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154724.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..301
                     /product="phosducin-like protein"
                     /calculated_mol_wt=34063
     Region          35..299
                     /region_name="Phosducin"
                     /note="pfam02114"
                     /db_xref="CDD:251094"
     CDS             1..301
                     /gene="PDCL"
                     /coded_by="XM_061154724.1:126..1031"
                     /db_xref="GeneID:133064509"
ORIGIN      
        1 mttlddkllg eklqyyysss eeedsdhedk dggrgalagg stpadadlag egisvntgpk
       61 gvindwrrfk qleteqreeq cremerlikk lslscrshld eeeeqqkqkd lqekisgkmt
      121 lkdltvmned qddeeflqqy rkqrmeemrq qlyqgpqfkq vfeipsgegf ldmidkeqrs
      181 tlimvhiyed gipgteamng cmlclaaeyp avkfcrvrss vigassrftr nalpalliyk
      241 ggelignfvr vtdqlgedff avdleaflqe fgllpekevl lltsvrnsat chsedsdlei
      301 d
//
LOCUS       XP_061010708             301 aa            linear   MAM 02-DEC-2023
DEFINITION  phosducin-like protein [Dama dama].
ACCESSION   XP_061010708
VERSION     XP_061010708.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154725.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..301
                     /product="phosducin-like protein"
                     /calculated_mol_wt=34063
     Region          35..299
                     /region_name="Phosducin"
                     /note="pfam02114"
                     /db_xref="CDD:251094"
     CDS             1..301
                     /gene="PDCL"
                     /coded_by="XM_061154725.1:191..1096"
                     /db_xref="GeneID:133064509"
ORIGIN      
        1 mttlddkllg eklqyyysss eeedsdhedk dggrgalagg stpadadlag egisvntgpk
       61 gvindwrrfk qleteqreeq cremerlikk lslscrshld eeeeqqkqkd lqekisgkmt
      121 lkdltvmned qddeeflqqy rkqrmeemrq qlyqgpqfkq vfeipsgegf ldmidkeqrs
      181 tlimvhiyed gipgteamng cmlclaaeyp avkfcrvrss vigassrftr nalpalliyk
      241 ggelignfvr vtdqlgedff avdleaflqe fgllpekevl lltsvrnsat chsedsdlei
      301 d
//
LOCUS       XP_061010710             301 aa            linear   MAM 02-DEC-2023
DEFINITION  phosducin-like protein [Dama dama].
ACCESSION   XP_061010710
VERSION     XP_061010710.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154727.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..301
                     /product="phosducin-like protein"
                     /calculated_mol_wt=34063
     Region          35..299
                     /region_name="Phosducin"
                     /note="pfam02114"
                     /db_xref="CDD:251094"
     CDS             1..301
                     /gene="PDCL"
                     /coded_by="XM_061154727.1:223..1128"
                     /db_xref="GeneID:133064509"
ORIGIN      
        1 mttlddkllg eklqyyysss eeedsdhedk dggrgalagg stpadadlag egisvntgpk
       61 gvindwrrfk qleteqreeq cremerlikk lslscrshld eeeeqqkqkd lqekisgkmt
      121 lkdltvmned qddeeflqqy rkqrmeemrq qlyqgpqfkq vfeipsgegf ldmidkeqrs
      181 tlimvhiyed gipgteamng cmlclaaeyp avkfcrvrss vigassrftr nalpalliyk
      241 ggelignfvr vtdqlgedff avdleaflqe fgllpekevl lltsvrnsat chsedsdlei
      301 d
//
LOCUS       XP_061010711             313 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1J4-like [Dama dama].
ACCESSION   XP_061010711
VERSION     XP_061010711.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154728.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..313
                     /product="olfactory receptor 1J4-like"
                     /calculated_mol_wt=35229
     Region          26..294
                     /region_name="7tmA_OR1_7-like"
                     /note="olfactory receptor families 1, 7, and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15918"
                     /db_xref="CDD:320584"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320584"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320584"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,252,255..256,258..259,262,
                     268..269,271..273,276,279..280)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320584"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320584"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320584"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320584"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320584"
     Region          269..294
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320584"
     CDS             1..313
                     /gene="LOC133064511"
                     /coded_by="XM_061154728.1:1..942"
                     /db_xref="GeneID:133064511"
ORIGIN      
        1 mrrenqssvs kflllglpiq peqqgvffal flgiymitvl gnllilllir ldtrlhtpmy
       61 fflshlafsd vffssvtvpk mlvnmqtqdr siphagciaq myffllfvcl dnfllavmay
      121 drymaicqpl hytaimregl cvllaagswf vscvhallht vllsqlsfca dntiphffcd
      181 latllkltcs dtslnelvif teggmfaflp lsailgsyir igatilrvls irricktlst
      241 cgshlfvvfl yygtlvmiyf fssannskvk divasvmytv vtpmlnpfiy slrnrdmkla
      301 lgilyrkgii fak
//
LOCUS       XP_061010712             313 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1J4-like [Dama dama].
ACCESSION   XP_061010712
VERSION     XP_061010712.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154729.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..313
                     /product="olfactory receptor 1J4-like"
                     /calculated_mol_wt=34946
     Region          26..294
                     /region_name="7tmA_OR1_7-like"
                     /note="olfactory receptor families 1, 7, and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15918"
                     /db_xref="CDD:320584"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320584"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320584"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,252,255..256,258..259,262,
                     268..269,271..273,276,279..280)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320584"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320584"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320584"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320584"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320584"
     Region          269..294
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320584"
     CDS             1..313
                     /gene="LOC133064512"
                     /coded_by="XM_061154729.1:1..942"
                     /db_xref="GeneID:133064512"
ORIGIN      
        1 mrrenqssis eflllgfpir peqqgiffal flavylttvl gnllivllir ldphlhtpmy
       61 fflshlaltd isfssvtvpk mlmnmqtqhq sisyvgcvtq tyfflfftdl ddflltsmay
      121 dryvaichpl hysttlgqgl cillvtvswi lscasalcht llltqvsfca dhtiphffcd
      181 ldallklscs dtslnelaif tvgvavivlp lvcilisygr igatilkvps tkgickalst
      241 cgshlsvvfl fygtiiglyt lpssstsndk nviasvmytv vtpmlnpfiy slrnrdmkra
      301 lrrlsrreif fsk
//
LOCUS       XP_061010713             313 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1J4-like [Dama dama].
ACCESSION   XP_061010713
VERSION     XP_061010713.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154730.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..313
                     /product="olfactory receptor 1J4-like"
                     /calculated_mol_wt=34633
     Region          26..294
                     /region_name="7tmA_OR1_7-like"
                     /note="olfactory receptor families 1, 7, and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15918"
                     /db_xref="CDD:320584"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320584"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320584"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,252,255..256,258..259,262,
                     268..269,271..273,276,279..280)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320584"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320584"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320584"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320584"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320584"
     Region          269..294
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320584"
     CDS             1..313
                     /gene="LOC133064513"
                     /coded_by="XM_061154730.1:1..942"
                     /db_xref="GeneID:133064513"
ORIGIN      
        1 mrpenqshvs eflllglpiw peqqgvffal flgmylttvl gnlliillir ldphlhtpmy
       61 fflshlaltd vsfssvtvpk mlinmqtqdq sipyagcitq myffllfgci dnlllvvmay
      121 dryvaichpl hyttimsrgl cvfllagswl lscvsalsht illaqlsfca eniiphffcd
      181 laallklscs dtslnellif tvgtavvilp lsgilvsygl igvsilrips tkgickalst
      241 cgshlfvvsl fygtimalyf stssgkskdk dmiaslmytv vapmlnpfiy slrnrdmkla
      301 lgilfrsnnl lik
//
LOCUS       XP_061010714             313 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1J1-like [Dama dama].
ACCESSION   XP_061010714
VERSION     XP_061010714.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154731.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..313
                     /product="olfactory receptor 1J1-like"
                     /calculated_mol_wt=34774
     Region          26..294
                     /region_name="7tmA_OR1_7-like"
                     /note="olfactory receptor families 1, 7, and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15918"
                     /db_xref="CDD:320584"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320584"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320584"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,252,255..256,258..259,262,
                     268..269,271..273,276,279..280)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320584"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320584"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320584"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320584"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320584"
     Region          269..294
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320584"
     CDS             1..313
                     /gene="LOC133064514"
                     /coded_by="XM_061154731.1:1..942"
                     /db_xref="GeneID:133064514"
ORIGIN      
        1 mtmenqssvs eflllglpiw peqqgvffal flgvylitvv gnlliillir ldsrlhtpmy
       61 fflshlaltd itfssvtvpk mlmimqtkhk sipyagcltq tyffilladl dsflitsmay
      121 dryvaichpl hyttimsqti cvtlvlgswv iacacalwht lllarlsfca rntipyffcd
      181 laallklscs dtslnqlvif tagltvimlp fvcilvsygh igatilwvps akgickalst
      241 cgshlsvvtl yygaiigvyf lpssnstnds niiasvmytv vtpmlnpfiy slrnkdmkra
      301 lrkllskrty ssn
//
LOCUS       XP_061010715             310 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1L8-like [Dama dama].
ACCESSION   XP_061010715
VERSION     XP_061010715.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154732.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..310
                     /product="olfactory receptor 1L8-like"
                     /calculated_mol_wt=35310
     Region          25..301
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          28..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320363"
     Region          61..83
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320363"
     Region          99..121
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320363"
     Region          144..160
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320363"
     Region          197..220
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320363"
     Region          239..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320363"
     Region          270..294
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320363"
     CDS             1..310
                     /gene="LOC133064515"
                     /coded_by="XM_061154732.1:1..933"
                     /db_xref="GeneID:133064515"
ORIGIN      
        1 merlnqtsrv sefillglss wpedqkplfi lffiiylvti tgnmltilai hsdphlhtpm
       61 yfflsvlsft diwyttsivp kmlidflsek ktisyagclt qmyfiyvlan idscllvvma
      121 ydryvaicdp fhyvtimsrc hcvllvafsc slphlhsllh illlnqltfc nsnvvhhflc
      181 dinpllklsc ssifvndlti kteglvvvvt pflcivfsyv rifisvlrip saagkrkafs
      241 tcgshltvvi lfygsifyvy lqplsrytvq drvativytv lssmlnpfiy slrnkdmkrg
      301 lgklmgrrks
//
LOCUS       XP_061010716             600 aa            linear   MAM 02-DEC-2023
DEFINITION  prostaglandin G/H synthase 1 [Dama dama].
ACCESSION   XP_061010716
VERSION     XP_061010716.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154733.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..600
                     /product="prostaglandin G/H synthase 1"
                     /calculated_mol_wt=68479
     Region          33..70
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          90..576
                     /region_name="prostaglandin_endoperoxide_synthase"
                     /note="Animal prostaglandin endoperoxide synthase and
                     related bacterial proteins; cd09816"
                     /db_xref="CDD:188648"
     Site            order(117,205,345,348..349,353,355,381,385,387,518,522,
                     526..527,530..531,534)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:188648"
     Site            order(125,127..129,136..140,142,229,319..323,326..327,330,
                     333..334,337,367..374,537..538,541..545,547..549,551..552)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:188648"
     Site            order(148,199,203,207,210..212,295,382,385..388,391,408,
                     444,446..447,450)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:188648"
     CDS             1..600
                     /gene="PTGS1"
                     /coded_by="XM_061154733.1:89..1891"
                     /db_xref="GeneID:133064517"
ORIGIN      
        1 msrqsislrf pllllllspa pvlpadpgap apvnpccyyp cqhqgvcvrf gldryqcdct
       61 rtgysgpnct ipeiwtwlrt tlrpspsfih fllthgrwlw dfvnatfird tlmrlvltvr
      121 snlipsppty nvahdyiswe sfsnvsyytr ilpsvpqdcp tpmgtkgkkq lpdagvlsrr
      181 fllrrkfipd pqgtnlmfaf faqhfthqff ktagkmgpgf tkalghgvdl ghiygdnler
      241 qyhlrlfkdg klkyqmlnge vyppsveeap vlmhypegip pqsqmavgqe vfgllpglml
      301 yatiwlrehn rvcdllkaeh ptwgdeqlfq tarliliget ikivieeyvq qlsgyflqlk
      361 fdpellfgaq fqyrnriame fnqlyhwhpl mpnsfrvgpq dysyeqflfn tsmlvdygve
      421 alvdafsrqp agrigggrni dhhilhvavn vikesrelrl qpfneyrkrf gmkpytsfqe
      481 ltgekemaae leelygdida lefypgllle kchpssifge smiemgapfs lkgllgnpic
      541 speywkastf ggevgfnlvk tatlkklvcl ntktcpyvsf hvpdprqedr pelerpptel
//
LOCUS       XP_061010717             262 aa            linear   MAM 02-DEC-2023
DEFINITION  ribosome-recycling factor, mitochondrial isoform X1 [Dama dama].
ACCESSION   XP_061010717
VERSION     XP_061010717.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154734.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..262
                     /product="ribosome-recycling factor, mitochondrial isoform
                     X1"
                     /calculated_mol_wt=28899
     Site            order(108..111,182..185)
                     /site_type="other"
                     /note="hinge region"
                     /db_xref="CDD:238288"
     Region          110..260
                     /region_name="RRF"
                     /note="Ribosome recycling factor; pfam01765"
                     /db_xref="CDD:460316"
     CDS             1..262
                     /gene="MRRF"
                     /coded_by="XM_061154734.1:140..928"
                     /db_xref="GeneID:133064518"
ORIGIN      
        1 malglrcfrl vhpafcssla altrpvsevt lqtvrrrqdd rgqymayaav pvrhfatkka
       61 kakgkgqsqt rmnlnaalve diinleevde emksviealk dnfnktvnir tspgsldsit
      121 vvtadgklal nqigqismks pqlilvnmas fpectaaaik airesgmnln pevegtlirv
      181 pipkvtrehr emlvklakqn tnkakdslrk vrtnainkvk kskdkasedt irliekqisq
      241 maddtvaeld rhlavktkel lg
//
LOCUS       XP_061010718             210 aa            linear   MAM 02-DEC-2023
DEFINITION  ribosome-recycling factor, mitochondrial isoform X2 [Dama dama].
ACCESSION   XP_061010718
VERSION     XP_061010718.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154735.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..210
                     /product="ribosome-recycling factor, mitochondrial isoform
                     X2"
                     /calculated_mol_wt=23113
     Region          62..208
                     /region_name="RRF"
                     /note="Ribosome recycling factor; pfam01765"
                     /db_xref="CDD:460316"
     CDS             1..210
                     /gene="MRRF"
                     /coded_by="XM_061154735.1:143..775"
                     /db_xref="GeneID:133064518"
ORIGIN      
        1 malglrcfrl vhpafcssla altrpvsevt lqtvrrrqdd rgqymayaav pvrhfatkka
       61 kgsldsitvv tadgklalnq igqismkspq lilvnmasfp ectaaaikai resgmnlnpe
      121 vegtlirvpi pkvtrehrem lvklakqntn kakdslrkvr tnainkvkks kdkasedtir
      181 liekqisqma ddtvaeldrh lavktkellg
//
LOCUS       XP_061010719             190 aa            linear   MAM 02-DEC-2023
DEFINITION  probable RNA-binding protein 18 isoform X1 [Dama dama].
ACCESSION   XP_061010719
VERSION     XP_061010719.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154736.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..190
                     /product="probable RNA-binding protein 18 isoform X1"
                     /calculated_mol_wt=21489
     Region          26..105
                     /region_name="RRM_RBM18"
                     /note="RNA recognition motif (RRM) found in eukaryotic
                     RNA-binding protein 18 and similar proteins; cd12355"
                     /db_xref="CDD:409791"
     CDS             1..190
                     /gene="RBM18"
                     /coded_by="XM_061154736.1:166..738"
                     /db_xref="GeneID:133064519"
ORIGIN      
        1 meaetktlpl enasilsegs lqeghrlwig nldpkiteyh llrllqkfgt vkqfdflfhk
       61 sgalegqprg ycfvnfetkq eaeqaiqcln gklalskklv vrwahaqvkr ydhnkndkil
      121 pislepssst epaqsnlsvt akikaieakl kmmaenpdae ypaapvysyf kppdkkrttp
      181 ysrtawksrr
//
LOCUS       XP_061010720             190 aa            linear   MAM 02-DEC-2023
DEFINITION  probable RNA-binding protein 18 isoform X1 [Dama dama].
ACCESSION   XP_061010720
VERSION     XP_061010720.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154737.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..190
                     /product="probable RNA-binding protein 18 isoform X1"
                     /calculated_mol_wt=21489
     Region          26..105
                     /region_name="RRM_RBM18"
                     /note="RNA recognition motif (RRM) found in eukaryotic
                     RNA-binding protein 18 and similar proteins; cd12355"
                     /db_xref="CDD:409791"
     CDS             1..190
                     /gene="RBM18"
                     /coded_by="XM_061154737.1:261..833"
                     /db_xref="GeneID:133064519"
ORIGIN      
        1 meaetktlpl enasilsegs lqeghrlwig nldpkiteyh llrllqkfgt vkqfdflfhk
       61 sgalegqprg ycfvnfetkq eaeqaiqcln gklalskklv vrwahaqvkr ydhnkndkil
      121 pislepssst epaqsnlsvt akikaieakl kmmaenpdae ypaapvysyf kppdkkrttp
      181 ysrtawksrr
//
LOCUS       XP_061010721             161 aa            linear   MAM 02-DEC-2023
DEFINITION  probable RNA-binding protein 18 isoform X2 [Dama dama].
ACCESSION   XP_061010721
VERSION     XP_061010721.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154738.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..161
                     /product="probable RNA-binding protein 18 isoform X2"
                     /calculated_mol_wt=18274
     Region          26..91
                     /region_name="RRM_RBM18"
                     /note="RNA recognition motif (RRM) found in eukaryotic
                     RNA-binding protein 18 and similar proteins; cd12355"
                     /db_xref="CDD:409791"
     CDS             1..161
                     /gene="RBM18"
                     /coded_by="XM_061154738.1:167..652"
                     /db_xref="GeneID:133064519"
ORIGIN      
        1 meaetktlpl enasilsegs lqeghrlwig nldpkiteyh llrllqkfgt vkqfdflfhk
       61 sgalegqprg ycfvnfetkq rydhnkndki lpislepsss tepaqsnlsv takikaieak
      121 lkmmaenpda eypaapvysy fkppdkkrtt pysrtawksr r
//
LOCUS       XP_061010722             172 aa            linear   MAM 02-DEC-2023
DEFINITION  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 [Dama
            dama].
ACCESSION   XP_061010722
VERSION     XP_061010722.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154739.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..172
                     /product="NADH dehydrogenase [ubiquinone] 1 alpha
                     subcomplex subunit 8"
                     /calculated_mol_wt=19988
     Region          78..111
                     /region_name="CHCH"
                     /note="CHCH domain; pfam06747"
                     /db_xref="CDD:429096"
     CDS             1..172
                     /gene="NDUFA8"
                     /coded_by="XM_061154739.1:106..624"
                     /db_xref="GeneID:133064520"
ORIGIN      
        1 mpgivelptl edlkvqevkv sssvlkaaah hygaqcdkpn kefmlcrwee kdprrcleeg
       61 klvnqcalef frqikrhcae pfteywtcid ysglqlfrrc rkqqaqfdec vldklgwvrp
      121 dlgelskvtk vktdrplpen pyhsrarpep npevegdlkp arhgsrlffw tm
//
LOCUS       XP_061010723             700 aa            linear   MAM 02-DEC-2023
DEFINITION  tubulin polyglutamylase TTLL11 [Dama dama].
ACCESSION   XP_061010723
VERSION     XP_061010723.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154740.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..700
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..700
                     /product="tubulin polyglutamylase TTLL11"
                     /calculated_mol_wt=78328
     Region          170..479
                     /region_name="CPSase_L_D2"
                     /note="Carbamoyl-phosphate synthase L chain, ATP binding
                     domain; cl17255"
                     /db_xref="CDD:473076"
     CDS             1..700
                     /gene="TTLL11"
                     /coded_by="XM_061154740.1:47..2149"
                     /db_xref="GeneID:133064521"
ORIGIN      
        1 mlrgsperel aawweaeava atkaqaakeq vrvdpgaage perkageeqp kepvpappca
       61 aeegdarilp rppptlpvsl tkpepasglc phgksrikgr sckrssgqpd eycslrpvtv
      121 dsskartsld alkisirqlk wkefpfgrrl pcdiywhgvs fhdndifsgq vnkfpgmtem
      181 vrkitlsrav rimqnlfpee ynfyprswil pdefqlfvaq vqmvkdgdps wkptfivkpd
      241 sgcqgdgiyl ikdpsdirls atlqsrpavv qeyickplli dklkfdirly vllksleple
      301 iyiakdglsr fctepyqeps pknlhhifmh ltnyslnihs gnfihsdsts tgskrtfssi
      361 lyrlsskgvd ikkvwsdiis lviktvialt pelkvfyqsd ipagrpgptc fqilgfdill
      421 mknlkpille vnanpsmrie heqelspgvf envpslvdee vkvavirdtl rlmdplkkrr
      481 esqsqllgkp laskenpphs dlasasrgna npdahlpsic lkqvfpkyak qfnylrlvdr
      541 manlfirflg ikgtmklgpt gfrtfirnck lsssslsmaa vdilyiditr rwnsmtmdqr
      601 dsgmclqafv eaffylaqrk fkmlplheqv aslidlceyh lslqdekrlv cgrsgissgs
      661 rlqpsatpqe aappappaeg rpqpctdgah kvshsrhsls
//
LOCUS       XP_061010724            1198 aa            linear   MAM 02-DEC-2023
DEFINITION  disabled homolog 2-interacting protein isoform X1 [Dama dama].
ACCESSION   XP_061010724
VERSION     XP_061010724.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154741.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1198
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1198
                     /product="disabled homolog 2-interacting protein isoform
                     X1"
                     /calculated_mol_wt=131863
     Region          75..265
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          207..346
                     /region_name="C2_SynGAP_like"
                     /note="C2 domain present in Ras GTPase activating protein
                     (GAP) family; cd04013"
                     /db_xref="CDD:175980"
     Region          337..660
                     /region_name="RasGAP_DAB2IP"
                     /note="Ras-GTPase Activating Domain of DAB2IP and similar
                     proteins; cd05136"
                     /db_xref="CDD:213338"
     Site            order(376,413,415,417..418,420,423,427,519,527..528,
                     531..532,535,556,559..560,563,567,569,574..575)
                     /site_type="other"
                     /note="putative RAS interface [polypeptide binding]"
                     /db_xref="CDD:213338"
     Region          650..1168
                     /region_name="DUF3498"
                     /note="Domain of unknown function (DUF3498); pfam12004"
                     /db_xref="CDD:463427"
     CDS             1..1198
                     /gene="DAB2IP"
                     /coded_by="XM_061154741.1:23..3619"
                     /db_xref="GeneID:133064522"
ORIGIN      
        1 msagggarks tgrpsyyyrl lrrprlqrqr srsrsrtrpa respqerpgs rrslpgslse
       61 kspsmepsaa tpfrvtgfls rrlkgsikrt ksqpkldrnh sfrhilpgfr saaaaaaaaa
      121 adnershlmp rlkesrshes llspssavea ldlsmeeevv ikpvhssilg qdycfevtts
      181 sgskcfscrs aaerdkwmen lrravhpnkd nsrrvehilk lwvieakdlp akkkylcelc
      241 lddvlyartt gklktdnvfw gehfefhnlp plrtvtvhly retdkkkkke rssylglvsl
      301 paasvagrqf vekwypvvtp npkggkgpgp mirikaryqt itilpmemyk efaehitnhy
      361 lglcaalepi lsaktkeema salvhilqst gkvkdfltdl mmsevdrcgd nehlifrent
      421 latkaieeyl klvgqkylqd algefikaly esdencevdp skcsaadlpe hqgnlkmcce
      481 lafckiinsy cvfprelkev faswrqecss rgrpdiserl isaslflrfl cpaimspslf
      541 nllqeypddr tartltliak vtqnlanfak fgskeeymsf mnqflehewt nmqrflleis
      601 npetisntag fegyidlgre lsslhsllwe avsqleqsiv sklgplpril rdvhtalstp
      661 gsgqlagtnd lastpgsgss svsaglqkmv iendlsglid ftrlpsptpe nkdlffvtrs
      721 sgvqpspars ssyseanepd lqmanggksl smvdlqdart ldgeagspag pdtlaadgqa
      781 patqlvagwp aratpvslag latvrragqt pttpgtsega pgrpqllapl sfqnpvyqma
      841 aglplsprgl gdsgseghss lsshsnseel aaaaklgsfs ssaaaaaped lgrrpgelar
      901 rqvsltekgg qptvprqnsa gpqrridqpp ppppppppas rgrtpptlls tlqyprpssg
      961 tlasaspdwa gpgarlrqqs ssskgdspel kpravhkqgp spvspnaldr taawlltmna
     1021 qlledeglgp dppprdrlrp keelsqaekd lavlqdklri stkkleeyet lfkcqeettq
     1081 klvleyqarl eegeerlrrq qedkdiqmkg iisrlmsvee elkkdhaemq aavdskqkii
     1141 daqekriasl daanarlmsa ltqlkerysm qarnglsptn ptklqiteng efrnssnc
//
LOCUS       XP_061010725            1176 aa            linear   MAM 02-DEC-2023
DEFINITION  disabled homolog 2-interacting protein isoform X2 [Dama dama].
ACCESSION   XP_061010725
VERSION     XP_061010725.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154742.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1176
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1176
                     /product="disabled homolog 2-interacting protein isoform
                     X2"
                     /calculated_mol_wt=129274
     Region          75..265
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          207..346
                     /region_name="C2_SynGAP_like"
                     /note="C2 domain present in Ras GTPase activating protein
                     (GAP) family; cd04013"
                     /db_xref="CDD:175980"
     Region          337..660
                     /region_name="RasGAP_DAB2IP"
                     /note="Ras-GTPase Activating Domain of DAB2IP and similar
                     proteins; cd05136"
                     /db_xref="CDD:213338"
     Site            order(376,413,415,417..418,420,423,427,519,527..528,
                     531..532,535,556,559..560,563,567,569,574..575)
                     /site_type="other"
                     /note="putative RAS interface [polypeptide binding]"
                     /db_xref="CDD:213338"
     Region          650..1146
                     /region_name="DUF3498"
                     /note="Domain of unknown function (DUF3498); pfam12004"
                     /db_xref="CDD:463427"
     CDS             1..1176
                     /gene="DAB2IP"
                     /coded_by="XM_061154742.1:23..3553"
                     /db_xref="GeneID:133064522"
ORIGIN      
        1 msagggarks tgrpsyyyrl lrrprlqrqr srsrsrtrpa respqerpgs rrslpgslse
       61 kspsmepsaa tpfrvtgfls rrlkgsikrt ksqpkldrnh sfrhilpgfr saaaaaaaaa
      121 adnershlmp rlkesrshes llspssavea ldlsmeeevv ikpvhssilg qdycfevtts
      181 sgskcfscrs aaerdkwmen lrravhpnkd nsrrvehilk lwvieakdlp akkkylcelc
      241 lddvlyartt gklktdnvfw gehfefhnlp plrtvtvhly retdkkkkke rssylglvsl
      301 paasvagrqf vekwypvvtp npkggkgpgp mirikaryqt itilpmemyk efaehitnhy
      361 lglcaalepi lsaktkeema salvhilqst gkvkdfltdl mmsevdrcgd nehlifrent
      421 latkaieeyl klvgqkylqd algefikaly esdencevdp skcsaadlpe hqgnlkmcce
      481 lafckiinsy cvfprelkev faswrqecss rgrpdiserl isaslflrfl cpaimspslf
      541 nllqeypddr tartltliak vtqnlanfak fgskeeymsf mnqflehewt nmqrflleis
      601 npetisntag fegyidlgre lsslhsllwe avsqleqsiv sklgplpril rdvhtalstp
      661 gsgqlagtnd lastpgsgss svsaglqkmv iendlsgssg vqpsparsss yseanepdlq
      721 manggkslsm vdlqdartld geagspagpd tlaadgqapa tqlvagwpar atpvslagla
      781 tvrragqtpt tpgtsegapg rpqllaplsf qnpvyqmaag lplsprglgd sgseghssls
      841 shsnseelaa aaklgsfsss aaaaapedlg rrpgelarrq vsltekggqp tvprqnsagp
      901 qrridqpppp ppppppasrg rtpptllstl qyprpssgtl asaspdwagp garlrqqsss
      961 skgdspelkp ravhkqgpsp vspnaldrta awlltmnaql ledeglgpdp pprdrlrpke
     1021 elsqaekdla vlqdklrist kkleeyetlf kcqeettqkl vleyqarlee geerlrrqqe
     1081 dkdiqmkgii srlmsveeel kkdhaemqaa vdskqkiida qekriaslda anarlmsalt
     1141 qlkerysmqa rnglsptnpt klqitengef rnssnc
//
LOCUS       XP_061010726            1169 aa            linear   MAM 02-DEC-2023
DEFINITION  disabled homolog 2-interacting protein isoform X3 [Dama dama].
ACCESSION   XP_061010726
VERSION     XP_061010726.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154743.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1169
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1169
                     /product="disabled homolog 2-interacting protein isoform
                     X3"
                     /calculated_mol_wt=128622
     Region          75..265
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          207..346
                     /region_name="C2_SynGAP_like"
                     /note="C2 domain present in Ras GTPase activating protein
                     (GAP) family; cd04013"
                     /db_xref="CDD:175980"
     Region          337..660
                     /region_name="RasGAP_DAB2IP"
                     /note="Ras-GTPase Activating Domain of DAB2IP and similar
                     proteins; cd05136"
                     /db_xref="CDD:213338"
     Site            order(376,413,415,417..418,420,423,427,519,527..528,
                     531..532,535,556,559..560,563,567,569,574..575)
                     /site_type="other"
                     /note="putative RAS interface [polypeptide binding]"
                     /db_xref="CDD:213338"
     Region          650..1166
                     /region_name="DUF3498"
                     /note="Domain of unknown function (DUF3498); pfam12004"
                     /db_xref="CDD:463427"
     CDS             1..1169
                     /gene="DAB2IP"
                     /coded_by="XM_061154743.1:23..3532"
                     /db_xref="GeneID:133064522"
ORIGIN      
        1 msagggarks tgrpsyyyrl lrrprlqrqr srsrsrtrpa respqerpgs rrslpgslse
       61 kspsmepsaa tpfrvtgfls rrlkgsikrt ksqpkldrnh sfrhilpgfr saaaaaaaaa
      121 adnershlmp rlkesrshes llspssavea ldlsmeeevv ikpvhssilg qdycfevtts
      181 sgskcfscrs aaerdkwmen lrravhpnkd nsrrvehilk lwvieakdlp akkkylcelc
      241 lddvlyartt gklktdnvfw gehfefhnlp plrtvtvhly retdkkkkke rssylglvsl
      301 paasvagrqf vekwypvvtp npkggkgpgp mirikaryqt itilpmemyk efaehitnhy
      361 lglcaalepi lsaktkeema salvhilqst gkvkdfltdl mmsevdrcgd nehlifrent
      421 latkaieeyl klvgqkylqd algefikaly esdencevdp skcsaadlpe hqgnlkmcce
      481 lafckiinsy cvfprelkev faswrqecss rgrpdiserl isaslflrfl cpaimspslf
      541 nllqeypddr tartltliak vtqnlanfak fgskeeymsf mnqflehewt nmqrflleis
      601 npetisntag fegyidlgre lsslhsllwe avsqleqsiv sklgplpril rdvhtalstp
      661 gsgqlagtnd lastpgsgss svsaglqkmv iendlsglid ftrlpsptpe nkdlffvtrs
      721 sgvqpspars ssyseanepd lqmanggksl smvdlqdart ldgeagspag pdtlaadgqa
      781 patqlvagwp aratpvslag latvrragqt pttpgtsega pgrpqllapl sfqnpvyqma
      841 aglplsprgl gdsgseghss lsshsnseel aaaaklgsfs ssaaaaaped lgrrpgelar
      901 rqvsltekgg qptvprqnsa gpqrridqpp ppppppppas rgrtpptlls tlqyprpssg
      961 tlasaspdwa gpgarlrqqs ssskgdspel kpravhkqgp spvspnaldr taawlltmna
     1021 qlledeglgp dppprdrlrp keelsqaekd lavlqdklri stkkleeyet lfkcqeettq
     1081 klvleyqarl eegeerlrrq qedkdiqmkg iisrlmsvee elkkdhaemq aavdskqkii
     1141 daqekriasl daanarlmsa ltqlkesmh
//
LOCUS       XP_061010727            1132 aa            linear   MAM 02-DEC-2023
DEFINITION  disabled homolog 2-interacting protein isoform X4 [Dama dama].
ACCESSION   XP_061010727
VERSION     XP_061010727.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154744.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1132
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1132
                     /product="disabled homolog 2-interacting protein isoform
                     X4"
                     /calculated_mol_wt=124624
     Region          20..>78
                     /region_name="DUF5591"
                     /note="Domain of unknown function (DUF5591); pfam17884"
                     /db_xref="CDD:436115"
     Region          53..199
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          141..280
                     /region_name="C2_SynGAP_like"
                     /note="C2 domain present in Ras GTPase activating protein
                     (GAP) family; cd04013"
                     /db_xref="CDD:175980"
     Region          271..594
                     /region_name="RasGAP_DAB2IP"
                     /note="Ras-GTPase Activating Domain of DAB2IP and similar
                     proteins; cd05136"
                     /db_xref="CDD:213338"
     Site            order(310,347,349,351..352,354,357,361,453,461..462,
                     465..466,469,490,493..494,497,501,503,508..509)
                     /site_type="other"
                     /note="putative RAS interface [polypeptide binding]"
                     /db_xref="CDD:213338"
     Region          584..1102
                     /region_name="DUF3498"
                     /note="Domain of unknown function (DUF3498); pfam12004"
                     /db_xref="CDD:463427"
     CDS             1..1132
                     /gene="DAB2IP"
                     /coded_by="XM_061154744.1:320..3718"
                     /db_xref="GeneID:133064522"
ORIGIN      
        1 mtatrmslcg fgllgdslgk firrassrwr prhrrkpdvp pgllvlrpcs aqrpiplprs
       61 hlmprlkesr shesllspss avealdlsme eevvikpvhs silgqdycfe vttssgskcf
      121 scrsaaerdk wmenlrravh pnkdnsrrve hilklwviea kdlpakkkyl celclddvly
      181 arttgklktd nvfwgehfef hnlpplrtvt vhlyretdkk kkkerssylg lvslpaasva
      241 grqfvekwyp vvtpnpkggk gpgpmirika ryqtitilpm emykefaehi tnhylglcaa
      301 lepilsaktk eemasalvhi lqstgkvkdf ltdlmmsevd rcgdnehlif rentlatkai
      361 eeylklvgqk ylqdalgefi kalyesdenc evdpskcsaa dlpehqgnlk mccelafcki
      421 insycvfpre lkevfaswrq ecssrgrpdi serlisaslf lrflcpaims pslfnllqey
      481 pddrtartlt liakvtqnla nfakfgskee ymsfmnqfle hewtnmqrfl leisnpetis
      541 ntagfegyid lgrelsslhs llweavsqle qsivsklgpl prilrdvhta lstpgsgqla
      601 gtndlastpg sgsssvsagl qkmviendls glidftrlps ptpenkdlff vtrssgvqps
      661 parsssysea nepdlqmang gkslsmvdlq dartldgeag spagpdtlaa dgqapatqlv
      721 agwparatpv slaglatvrr agqtpttpgt segapgrpql laplsfqnpv yqmaaglpls
      781 prglgdsgse ghsslsshsn seelaaaakl gsfsssaaaa apedlgrrpg elarrqvslt
      841 ekggqptvpr qnsagpqrri dqpppppppp ppasrgrtpp tllstlqypr pssgtlasas
      901 pdwagpgarl rqqsssskgd spelkpravh kqgpspvspn aldrtaawll tmnaqllede
      961 glgpdppprd rlrpkeelsq aekdlavlqd klristkkle eyetlfkcqe ettqklvley
     1021 qarleegeer lrrqqedkdi qmkgiisrlm sveeelkkdh aemqaavdsk qkiidaqekr
     1081 iasldaanar lmsaltqlke rysmqarngl sptnptklqi tengefrnss nc
//
LOCUS       XP_061010728            1070 aa            linear   MAM 02-DEC-2023
DEFINITION  disabled homolog 2-interacting protein isoform X5 [Dama dama].
ACCESSION   XP_061010728
VERSION     XP_061010728.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154745.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1070
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1070
                     /product="disabled homolog 2-interacting protein isoform
                     X5"
                     /calculated_mol_wt=117625
     Region          <1..137
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          79..218
                     /region_name="C2_SynGAP_like"
                     /note="C2 domain present in Ras GTPase activating protein
                     (GAP) family; cd04013"
                     /db_xref="CDD:175980"
     Region          209..532
                     /region_name="RasGAP_DAB2IP"
                     /note="Ras-GTPase Activating Domain of DAB2IP and similar
                     proteins; cd05136"
                     /db_xref="CDD:213338"
     Site            order(248,285,287,289..290,292,295,299,391,399..400,
                     403..404,407,428,431..432,435,439,441,446..447)
                     /site_type="other"
                     /note="putative RAS interface [polypeptide binding]"
                     /db_xref="CDD:213338"
     Region          522..1040
                     /region_name="DUF3498"
                     /note="Domain of unknown function (DUF3498); pfam12004"
                     /db_xref="CDD:463427"
     CDS             1..1070
                     /gene="DAB2IP"
                     /coded_by="XM_061154745.1:168..3380"
                     /db_xref="GeneID:133064522"
ORIGIN      
        1 mprlkesrsh esllspssav ealdlsmeee vvikpvhssi lgqdycfevt tssgskcfsc
       61 rsaaerdkwm enlrravhpn kdnsrrvehi lklwvieakd lpakkkylce lclddvlyar
      121 ttgklktdnv fwgehfefhn lpplrtvtvh lyretdkkkk kerssylglv slpaasvagr
      181 qfvekwypvv tpnpkggkgp gpmirikary qtitilpmem ykefaehitn hylglcaale
      241 pilsaktkee masalvhilq stgkvkdflt dlmmsevdrc gdnehlifre ntlatkaiee
      301 ylklvgqkyl qdalgefika lyesdencev dpskcsaadl pehqgnlkmc celafckiin
      361 sycvfprelk evfaswrqec ssrgrpdise rlisaslflr flcpaimsps lfnllqeypd
      421 drtartltli akvtqnlanf akfgskeeym sfmnqflehe wtnmqrflle isnpetisnt
      481 agfegyidlg relsslhsll weavsqleqs ivsklgplpr ilrdvhtals tpgsgqlagt
      541 ndlastpgsg sssvsaglqk mviendlsgl idftrlpspt penkdlffvt rssgvqpspa
      601 rsssyseane pdlqmanggk slsmvdlqda rtldgeagsp agpdtlaadg qapatqlvag
      661 wparatpvsl aglatvrrag qtpttpgtse gapgrpqlla plsfqnpvyq maaglplspr
      721 glgdsgsegh sslsshsnse elaaaaklgs fsssaaaaap edlgrrpgel arrqvsltek
      781 ggqptvprqn sagpqrridq pppppppppp asrgrtpptl lstlqyprps sgtlasaspd
      841 wagpgarlrq qsssskgdsp elkpravhkq gpspvspnal drtaawlltm naqlledegl
      901 gpdppprdrl rpkeelsqae kdlavlqdkl ristkkleey etlfkcqeet tqklvleyqa
      961 rleegeerlr rqqedkdiqm kgiisrlmsv eeelkkdhae mqaavdskqk iidaqekria
     1021 sldaanarlm saltqlkery smqarnglsp tnptklqite ngefrnssnc
//
LOCUS       XP_061010729            1070 aa            linear   MAM 02-DEC-2023
DEFINITION  disabled homolog 2-interacting protein isoform X5 [Dama dama].
ACCESSION   XP_061010729
VERSION     XP_061010729.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154746.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1070
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1070
                     /product="disabled homolog 2-interacting protein isoform
                     X5"
                     /calculated_mol_wt=117625
     Region          <1..137
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          79..218
                     /region_name="C2_SynGAP_like"
                     /note="C2 domain present in Ras GTPase activating protein
                     (GAP) family; cd04013"
                     /db_xref="CDD:175980"
     Region          209..532
                     /region_name="RasGAP_DAB2IP"
                     /note="Ras-GTPase Activating Domain of DAB2IP and similar
                     proteins; cd05136"
                     /db_xref="CDD:213338"
     Site            order(248,285,287,289..290,292,295,299,391,399..400,
                     403..404,407,428,431..432,435,439,441,446..447)
                     /site_type="other"
                     /note="putative RAS interface [polypeptide binding]"
                     /db_xref="CDD:213338"
     Region          522..1040
                     /region_name="DUF3498"
                     /note="Domain of unknown function (DUF3498); pfam12004"
                     /db_xref="CDD:463427"
     CDS             1..1070
                     /gene="DAB2IP"
                     /coded_by="XM_061154746.1:58..3270"
                     /db_xref="GeneID:133064522"
ORIGIN      
        1 mprlkesrsh esllspssav ealdlsmeee vvikpvhssi lgqdycfevt tssgskcfsc
       61 rsaaerdkwm enlrravhpn kdnsrrvehi lklwvieakd lpakkkylce lclddvlyar
      121 ttgklktdnv fwgehfefhn lpplrtvtvh lyretdkkkk kerssylglv slpaasvagr
      181 qfvekwypvv tpnpkggkgp gpmirikary qtitilpmem ykefaehitn hylglcaale
      241 pilsaktkee masalvhilq stgkvkdflt dlmmsevdrc gdnehlifre ntlatkaiee
      301 ylklvgqkyl qdalgefika lyesdencev dpskcsaadl pehqgnlkmc celafckiin
      361 sycvfprelk evfaswrqec ssrgrpdise rlisaslflr flcpaimsps lfnllqeypd
      421 drtartltli akvtqnlanf akfgskeeym sfmnqflehe wtnmqrflle isnpetisnt
      481 agfegyidlg relsslhsll weavsqleqs ivsklgplpr ilrdvhtals tpgsgqlagt
      541 ndlastpgsg sssvsaglqk mviendlsgl idftrlpspt penkdlffvt rssgvqpspa
      601 rsssyseane pdlqmanggk slsmvdlqda rtldgeagsp agpdtlaadg qapatqlvag
      661 wparatpvsl aglatvrrag qtpttpgtse gapgrpqlla plsfqnpvyq maaglplspr
      721 glgdsgsegh sslsshsnse elaaaaklgs fsssaaaaap edlgrrpgel arrqvsltek
      781 ggqptvprqn sagpqrridq pppppppppp asrgrtpptl lstlqyprps sgtlasaspd
      841 wagpgarlrq qsssskgdsp elkpravhkq gpspvspnal drtaawlltm naqlledegl
      901 gpdppprdrl rpkeelsqae kdlavlqdkl ristkkleey etlfkcqeet tqklvleyqa
      961 rleegeerlr rqqedkdiqm kgiisrlmsv eeelkkdhae mqaavdskqk iidaqekria
     1021 sldaanarlm saltqlkery smqarnglsp tnptklqite ngefrnssnc
//
LOCUS       XP_061010730             368 aa            linear   MAM 02-DEC-2023
DEFINITION  inactive N-acetyllactosaminide alpha-1,3-galactosyltransferase
            isoform X1 [Dama dama].
ACCESSION   XP_061010730
VERSION     XP_061010730.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154747.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..368
                     /product="inactive N-acetyllactosaminide
                     alpha-1,3-galactosyltransferase isoform X1"
                     /calculated_mol_wt=43337
     Region          94..365
                     /region_name="Glyco_transf_6"
                     /note="Glycosyltransferase family 6 comprises enzymes
                     responsible for the production of the human ABO blood
                     group antigens; cd02515"
                     /db_xref="CDD:133008"
     Site            order(134..136,139,198,202,225..227,359,361,365)
                     /site_type="active"
                     /note="substrate binding site [active]"
                     /db_xref="CDD:133008"
     Site            order(134..136,139,225..227,247..250,259,278,314,317)
                     /site_type="active"
                     /db_xref="CDD:133008"
     CDS             1..368
                     /gene="GGTA1"
                     /coded_by="XM_061154747.1:260..1366"
                     /db_xref="GeneID:133064524"
ORIGIN      
        1 mnvkgkvils mlvvstvivv fweyihspeg slfwinpsrn pevggssiqk gwwfprwfnn
       61 gyheededid eekehrkede sklklsdwfn pfkrpevvtm tdwkapvvwe gtynraildd
      121 yyakqkitvg ltvfavgryi ehyleeflts ankhfmvghr vifyimvddv srmplielgp
      181 lrsfkvfeik pekrwqdism mrmktigehi vahiqhevdf lfcmdvdqvf qdkfgvetlg
      241 esvaqlqaww ykadpdefty errkesaayi pfgegdfyyh aaifggtptq vlnitqecfk
      301 gilkdkkndi eaqwhdeshl nkyfllnkpt kilspeycwd yhiglpadik lvkmswqtke
      361 ynvvrnni
//
LOCUS       XP_061010731             368 aa            linear   MAM 02-DEC-2023
DEFINITION  inactive N-acetyllactosaminide alpha-1,3-galactosyltransferase
            isoform X1 [Dama dama].
ACCESSION   XP_061010731
VERSION     XP_061010731.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154748.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..368
                     /product="inactive N-acetyllactosaminide
                     alpha-1,3-galactosyltransferase isoform X1"
                     /calculated_mol_wt=43337
     Region          94..365
                     /region_name="Glyco_transf_6"
                     /note="Glycosyltransferase family 6 comprises enzymes
                     responsible for the production of the human ABO blood
                     group antigens; cd02515"
                     /db_xref="CDD:133008"
     Site            order(134..136,139,198,202,225..227,359,361,365)
                     /site_type="active"
                     /note="substrate binding site [active]"
                     /db_xref="CDD:133008"
     Site            order(134..136,139,225..227,247..250,259,278,314,317)
                     /site_type="active"
                     /db_xref="CDD:133008"
     CDS             1..368
                     /gene="GGTA1"
                     /coded_by="XM_061154748.1:154..1260"
                     /db_xref="GeneID:133064524"
ORIGIN      
        1 mnvkgkvils mlvvstvivv fweyihspeg slfwinpsrn pevggssiqk gwwfprwfnn
       61 gyheededid eekehrkede sklklsdwfn pfkrpevvtm tdwkapvvwe gtynraildd
      121 yyakqkitvg ltvfavgryi ehyleeflts ankhfmvghr vifyimvddv srmplielgp
      181 lrsfkvfeik pekrwqdism mrmktigehi vahiqhevdf lfcmdvdqvf qdkfgvetlg
      241 esvaqlqaww ykadpdefty errkesaayi pfgegdfyyh aaifggtptq vlnitqecfk
      301 gilkdkkndi eaqwhdeshl nkyfllnkpt kilspeycwd yhiglpadik lvkmswqtke
      361 ynvvrnni
//
LOCUS       XP_061010733             368 aa            linear   MAM 02-DEC-2023
DEFINITION  inactive N-acetyllactosaminide alpha-1,3-galactosyltransferase
            isoform X1 [Dama dama].
ACCESSION   XP_061010733
VERSION     XP_061010733.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154750.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..368
                     /product="inactive N-acetyllactosaminide
                     alpha-1,3-galactosyltransferase isoform X1"
                     /calculated_mol_wt=43337
     Region          94..365
                     /region_name="Glyco_transf_6"
                     /note="Glycosyltransferase family 6 comprises enzymes
                     responsible for the production of the human ABO blood
                     group antigens; cd02515"
                     /db_xref="CDD:133008"
     Site            order(134..136,139,198,202,225..227,359,361,365)
                     /site_type="active"
                     /note="substrate binding site [active]"
                     /db_xref="CDD:133008"
     Site            order(134..136,139,225..227,247..250,259,278,314,317)
                     /site_type="active"
                     /db_xref="CDD:133008"
     CDS             1..368
                     /gene="GGTA1"
                     /coded_by="XM_061154750.1:145..1251"
                     /db_xref="GeneID:133064524"
ORIGIN      
        1 mnvkgkvils mlvvstvivv fweyihspeg slfwinpsrn pevggssiqk gwwfprwfnn
       61 gyheededid eekehrkede sklklsdwfn pfkrpevvtm tdwkapvvwe gtynraildd
      121 yyakqkitvg ltvfavgryi ehyleeflts ankhfmvghr vifyimvddv srmplielgp
      181 lrsfkvfeik pekrwqdism mrmktigehi vahiqhevdf lfcmdvdqvf qdkfgvetlg
      241 esvaqlqaww ykadpdefty errkesaayi pfgegdfyyh aaifggtptq vlnitqecfk
      301 gilkdkkndi eaqwhdeshl nkyfllnkpt kilspeycwd yhiglpadik lvkmswqtke
      361 ynvvrnni
//
LOCUS       XP_061010734             343 aa            linear   MAM 02-DEC-2023
DEFINITION  inactive N-acetyllactosaminide alpha-1,3-galactosyltransferase
            isoform X2 [Dama dama].
ACCESSION   XP_061010734
VERSION     XP_061010734.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154751.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..343
                     /product="inactive N-acetyllactosaminide
                     alpha-1,3-galactosyltransferase isoform X2"
                     /calculated_mol_wt=40480
     Region          69..340
                     /region_name="Glyco_transf_6"
                     /note="Glycosyltransferase family 6 comprises enzymes
                     responsible for the production of the human ABO blood
                     group antigens; cd02515"
                     /db_xref="CDD:133008"
     Site            order(109..111,114,173,177,200..202,334,336,340)
                     /site_type="active"
                     /note="substrate binding site [active]"
                     /db_xref="CDD:133008"
     Site            order(109..111,114,200..202,222..225,234,253,289,292)
                     /site_type="active"
                     /db_xref="CDD:133008"
     CDS             1..343
                     /gene="GGTA1"
                     /coded_by="XM_061154751.1:246..1277"
                     /db_xref="GeneID:133064524"
ORIGIN      
        1 mspegslfwi npsrnpevgg ssiqkgwwfp rwfnngyhee dedideekeh rkedesklkl
       61 sdwfnpfkrp evvtmtdwka pvvwegtynr ailddyyakq kitvgltvfa vgryiehyle
      121 efltsankhf mvghrvifyi mvddvsrmpl ielgplrsfk vfeikpekrw qdismmrmkt
      181 igehivahiq hevdflfcmd vdqvfqdkfg vetlgesvaq lqawwykadp deftyerrke
      241 saayipfgeg dfyyhaaifg gtptqvlnit qecfkgilkd kkndieaqwh deshlnkyfl
      301 lnkptkilsp eycwdyhigl padiklvkms wqtkeynvvr nni
//
LOCUS       XP_061010735             445 aa            linear   MAM 02-DEC-2023
DEFINITION  UMP-CMP kinase 2, mitochondrial [Dama dama].
ACCESSION   XP_061010735
VERSION     XP_061010735.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154752.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..445
                     /product="UMP-CMP kinase 2, mitochondrial"
                     /calculated_mol_wt=49337
     Region          255..436
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Site            order(257,262..265)
                     /site_type="active"
                     /db_xref="CDD:238977"
     CDS             1..445
                     /gene="CMPK2"
                     /coded_by="XM_061154752.1:16..1353"
                     /db_xref="GeneID:133064525"
ORIGIN      
        1 mafgrhprar rllarlssrr rgacalamep prcfalelpg ctlahfavge qapgarpdpr
       61 vaallgppgr syslsvpgtg gagarvraar lhqhlrqqlr rgpfqrcelr rllgyrpdgg
      121 agalqhgfll rdprdspdtr qallalldac peaprprlae fsgdplcqlw rrpwerrdgr
      181 gwwqlggerv gpapepklhp vvpdlpsagv fphreaarav leactsfipe aqavldlvdq
      241 cpeqvqkgrf pvivieglda tgkttvtqsv sdslkavllk sppscisqwr kifddeptii
      301 rrafyslgny ivaseiakes tkspvivdry whstatyaia tevsgglqhl ppvhhpiyqw
      361 prdllkpdlv llltvspeer mqriegrgme ktreeaelet dsifrqkvev cyqrmenpgc
      421 hvvdaspsre kvlqmvlsvi qnncn
//
LOCUS       XP_061010736             363 aa            linear   MAM 02-DEC-2023
DEFINITION  S-adenosylmethionine-dependent nucleotide dehydratase RSAD2 [Dama
            dama].
ACCESSION   XP_061010736
VERSION     XP_061010736.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154753.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..363
                     /product="S-adenosylmethionine-dependent nucleotide
                     dehydratase RSAD2"
                     /calculated_mol_wt=41416
     Region          13..363
                     /region_name="viperin"
                     /note="antiviral radical SAM protein viperin; TIGR04278"
                     /db_xref="CDD:212001"
     CDS             1..363
                     /gene="RSAD2"
                     /coded_by="XM_061154753.1:91..1182"
                     /db_xref="GeneID:133064526"
ORIGIN      
        1 mwmlvpivfa lkllstflqp lgsvwsslgp lflqlraasw lagaersqql qgrreagepg
       61 raegegggdl pttptsvnyh ftrqcnykcg fcfhtaktsf vlpleeakrg llmlkeagme
      121 kinfsggepf lqdrgeylgs lvkfckqelq lpsvsivsng slirerwfqk ygeyldilai
      181 scdsfdeqvn vligrgqgkk nhvenlqklr twckeyrvaf kinsvinrfn vdedmkeqin
      241 alnpvrwkvf qcliiegens gqdalreaer fvisdeefea fldrhkdvsc lvpesnqkmr
      301 dsylildeym rflncrngrk dpsksildvg veeaikfsgf dekmflkrgg kyvwskadlk
      361 ldw
//
LOCUS       XP_061010737             209 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase RNF144A isoform X1 [Dama dama].
ACCESSION   XP_061010737
VERSION     XP_061010737.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154754.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..209
                     /product="E3 ubiquitin-protein ligase RNF144A isoform X1"
                     /calculated_mol_wt=23338
     Region          16..80
                     /region_name="BRcat_RBR_RNF144A"
                     /note="BRcat domain found in RING finger protein 144A
                     (RNF144A); cd20366"
                     /db_xref="CDD:439027"
     Region          95..164
                     /region_name="Rcat_RBR_RNF144"
                     /note="Rcat domain found in the RNF144 protein subfamily;
                     cd20352"
                     /db_xref="CDD:439013"
     CDS             1..209
                     /gene="RNF144A"
                     /coded_by="XM_061154754.1:134..763"
                     /db_xref="GeneID:133064527"
ORIGIN      
        1 mvaaeimqry kklqferevl ldpcrtwcpa stcqavcqlq emglhtpqlv qckacdtefc
       61 sackaswhpg qgcpetmpit flpgetssaf kldeddapik rcpkckvyie rdegcaqmmc
      121 knckhafcwy clesldddfl lihydkgpcr nklghsrasv iwhrtqvvgi fagfgllllv
      181 aspflllatp fvlcckckcs kgdddplpt
//
LOCUS       XP_061010738             179 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase RNF144A isoform X2 [Dama dama].
ACCESSION   XP_061010738
VERSION     XP_061010738.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154755.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..179
                     /product="E3 ubiquitin-protein ligase RNF144A isoform X2"
                     /calculated_mol_wt=19792
     Region          16..80
                     /region_name="BRcat_RBR_RNF144A"
                     /note="BRcat domain found in RING finger protein 144A
                     (RNF144A); cd20366"
                     /db_xref="CDD:439027"
     Region          95..>136
                     /region_name="BRcat_Rcat_RBR"
                     /note="BRcat (benign-catalytic) and Rcat
                     (required-for-catalysis) domains, part of the RBR
                     (RING1-BRcat-Rcat) domain; cl45895"
                     /db_xref="CDD:459240"
     Site            order(102,105,120,123,128,131)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:438995"
     CDS             1..179
                     /gene="RNF144A"
                     /coded_by="XM_061154755.1:352..891"
                     /db_xref="GeneID:133064527"
ORIGIN      
        1 mvaaeimqry kklqferevl ldpcrtwcpa stcqavcqlq emglhtpqlv qckacdtefc
       61 sackaswhpg qgcpetmpit flpgetssaf kldeddapik rcpkckvyie rdegcaqmmc
      121 knckhafcwy clesldvvgi fagfgllllv aspflllatp fvlcckckcs kgdddplpt
//
LOCUS       XP_061010739             293 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase RNF144A isoform X3 [Dama dama].
ACCESSION   XP_061010739
VERSION     XP_061010739.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154756.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..293
                     /product="E3 ubiquitin-protein ligase RNF144A isoform X3"
                     /calculated_mol_wt=32603
     Region          19..73
                     /region_name="mRING-HC-C4C4_RBR_RNF144A"
                     /note="Modified RING finger, HC subclass (C4C4-type),
                     found in RING finger protein 144A (RNF144A); cd16777"
                     /db_xref="CDD:438433"
     Region          100..164
                     /region_name="BRcat_RBR_RNF144A"
                     /note="BRcat domain found in RING finger protein 144A
                     (RNF144A); cd20366"
                     /db_xref="CDD:439027"
     Region          179..248
                     /region_name="Rcat_RBR_RNF144"
                     /note="Rcat domain found in the RNF144 protein subfamily;
                     cd20352"
                     /db_xref="CDD:439013"
     CDS             1..293
                     /gene="RNF144A"
                     /coded_by="XM_061154756.1:250..1131"
                     /db_xref="GeneID:133064527"
ORIGIN      
        1 msaaracrps wdlaldplvs cklclgeypv eqmttisqcq cvfctlclkq yvellikegl
       61 etaiscpdaa cpkqghlqen eiecmvaaei mqrykklqfe revlldpcrt wcpastcqav
      121 cqlqemglht pqlvqckacd tefcsackas whpgqgcpet mpitflpget ssafkldedd
      181 apikrcpkck vyierdegca qmmcknckha fcwyclesld ddfllihydk gpcrnklghs
      241 rasviwhrtq vvgifagfgl lllvaspfll latpfvlcck ckcskgdddp lpt
//
LOCUS       XP_061010740             293 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase RNF144A isoform X3 [Dama dama].
ACCESSION   XP_061010740
VERSION     XP_061010740.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154757.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..293
                     /product="E3 ubiquitin-protein ligase RNF144A isoform X3"
                     /calculated_mol_wt=32603
     Region          19..73
                     /region_name="mRING-HC-C4C4_RBR_RNF144A"
                     /note="Modified RING finger, HC subclass (C4C4-type),
                     found in RING finger protein 144A (RNF144A); cd16777"
                     /db_xref="CDD:438433"
     Region          100..164
                     /region_name="BRcat_RBR_RNF144A"
                     /note="BRcat domain found in RING finger protein 144A
                     (RNF144A); cd20366"
                     /db_xref="CDD:439027"
     Region          179..248
                     /region_name="Rcat_RBR_RNF144"
                     /note="Rcat domain found in the RNF144 protein subfamily;
                     cd20352"
                     /db_xref="CDD:439013"
     CDS             1..293
                     /gene="RNF144A"
                     /coded_by="XM_061154757.1:148..1029"
                     /db_xref="GeneID:133064527"
ORIGIN      
        1 msaaracrps wdlaldplvs cklclgeypv eqmttisqcq cvfctlclkq yvellikegl
       61 etaiscpdaa cpkqghlqen eiecmvaaei mqrykklqfe revlldpcrt wcpastcqav
      121 cqlqemglht pqlvqckacd tefcsackas whpgqgcpet mpitflpget ssafkldedd
      181 apikrcpkck vyierdegca qmmcknckha fcwyclesld ddfllihydk gpcrnklghs
      241 rasviwhrtq vvgifagfgl lllvaspfll latpfvlcck ckcskgdddp lpt
//
LOCUS       XP_061010741             293 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase RNF144A isoform X3 [Dama dama].
ACCESSION   XP_061010741
VERSION     XP_061010741.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154758.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..293
                     /product="E3 ubiquitin-protein ligase RNF144A isoform X3"
                     /calculated_mol_wt=32603
     Region          19..73
                     /region_name="mRING-HC-C4C4_RBR_RNF144A"
                     /note="Modified RING finger, HC subclass (C4C4-type),
                     found in RING finger protein 144A (RNF144A); cd16777"
                     /db_xref="CDD:438433"
     Region          100..164
                     /region_name="BRcat_RBR_RNF144A"
                     /note="BRcat domain found in RING finger protein 144A
                     (RNF144A); cd20366"
                     /db_xref="CDD:439027"
     Region          179..248
                     /region_name="Rcat_RBR_RNF144"
                     /note="Rcat domain found in the RNF144 protein subfamily;
                     cd20352"
                     /db_xref="CDD:439013"
     CDS             1..293
                     /gene="RNF144A"
                     /coded_by="XM_061154758.1:211..1092"
                     /db_xref="GeneID:133064527"
ORIGIN      
        1 msaaracrps wdlaldplvs cklclgeypv eqmttisqcq cvfctlclkq yvellikegl
       61 etaiscpdaa cpkqghlqen eiecmvaaei mqrykklqfe revlldpcrt wcpastcqav
      121 cqlqemglht pqlvqckacd tefcsackas whpgqgcpet mpitflpget ssafkldedd
      181 apikrcpkck vyierdegca qmmcknckha fcwyclesld ddfllihydk gpcrnklghs
      241 rasviwhrtq vvgifagfgl lllvaspfll latpfvlcck ckcskgdddp lpt
//
LOCUS       XP_061010742             293 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase RNF144A isoform X3 [Dama dama].
ACCESSION   XP_061010742
VERSION     XP_061010742.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154759.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..293
                     /product="E3 ubiquitin-protein ligase RNF144A isoform X3"
                     /calculated_mol_wt=32603
     Region          19..73
                     /region_name="mRING-HC-C4C4_RBR_RNF144A"
                     /note="Modified RING finger, HC subclass (C4C4-type),
                     found in RING finger protein 144A (RNF144A); cd16777"
                     /db_xref="CDD:438433"
     Region          100..164
                     /region_name="BRcat_RBR_RNF144A"
                     /note="BRcat domain found in RING finger protein 144A
                     (RNF144A); cd20366"
                     /db_xref="CDD:439027"
     Region          179..248
                     /region_name="Rcat_RBR_RNF144"
                     /note="Rcat domain found in the RNF144 protein subfamily;
                     cd20352"
                     /db_xref="CDD:439013"
     CDS             1..293
                     /gene="RNF144A"
                     /coded_by="XM_061154759.1:138..1019"
                     /db_xref="GeneID:133064527"
ORIGIN      
        1 msaaracrps wdlaldplvs cklclgeypv eqmttisqcq cvfctlclkq yvellikegl
       61 etaiscpdaa cpkqghlqen eiecmvaaei mqrykklqfe revlldpcrt wcpastcqav
      121 cqlqemglht pqlvqckacd tefcsackas whpgqgcpet mpitflpget ssafkldedd
      181 apikrcpkck vyierdegca qmmcknckha fcwyclesld ddfllihydk gpcrnklghs
      241 rasviwhrtq vvgifagfgl lllvaspfll latpfvlcck ckcskgdddp lpt
//
LOCUS       XP_061010743             293 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase RNF144A isoform X3 [Dama dama].
ACCESSION   XP_061010743
VERSION     XP_061010743.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154760.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..293
                     /product="E3 ubiquitin-protein ligase RNF144A isoform X3"
                     /calculated_mol_wt=32603
     Region          19..73
                     /region_name="mRING-HC-C4C4_RBR_RNF144A"
                     /note="Modified RING finger, HC subclass (C4C4-type),
                     found in RING finger protein 144A (RNF144A); cd16777"
                     /db_xref="CDD:438433"
     Region          100..164
                     /region_name="BRcat_RBR_RNF144A"
                     /note="BRcat domain found in RING finger protein 144A
                     (RNF144A); cd20366"
                     /db_xref="CDD:439027"
     Region          179..248
                     /region_name="Rcat_RBR_RNF144"
                     /note="Rcat domain found in the RNF144 protein subfamily;
                     cd20352"
                     /db_xref="CDD:439013"
     CDS             1..293
                     /gene="RNF144A"
                     /coded_by="XM_061154760.1:150..1031"
                     /db_xref="GeneID:133064527"
ORIGIN      
        1 msaaracrps wdlaldplvs cklclgeypv eqmttisqcq cvfctlclkq yvellikegl
       61 etaiscpdaa cpkqghlqen eiecmvaaei mqrykklqfe revlldpcrt wcpastcqav
      121 cqlqemglht pqlvqckacd tefcsackas whpgqgcpet mpitflpget ssafkldedd
      181 apikrcpkck vyierdegca qmmcknckha fcwyclesld ddfllihydk gpcrnklghs
      241 rasviwhrtq vvgifagfgl lllvaspfll latpfvlcck ckcskgdddp lpt
//
LOCUS       XP_061010744             293 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase RNF144A isoform X3 [Dama dama].
ACCESSION   XP_061010744
VERSION     XP_061010744.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154761.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..293
                     /product="E3 ubiquitin-protein ligase RNF144A isoform X3"
                     /calculated_mol_wt=32603
     Region          19..73
                     /region_name="mRING-HC-C4C4_RBR_RNF144A"
                     /note="Modified RING finger, HC subclass (C4C4-type),
                     found in RING finger protein 144A (RNF144A); cd16777"
                     /db_xref="CDD:438433"
     Region          100..164
                     /region_name="BRcat_RBR_RNF144A"
                     /note="BRcat domain found in RING finger protein 144A
                     (RNF144A); cd20366"
                     /db_xref="CDD:439027"
     Region          179..248
                     /region_name="Rcat_RBR_RNF144"
                     /note="Rcat domain found in the RNF144 protein subfamily;
                     cd20352"
                     /db_xref="CDD:439013"
     CDS             1..293
                     /gene="RNF144A"
                     /coded_by="XM_061154761.1:148..1029"
                     /db_xref="GeneID:133064527"
ORIGIN      
        1 msaaracrps wdlaldplvs cklclgeypv eqmttisqcq cvfctlclkq yvellikegl
       61 etaiscpdaa cpkqghlqen eiecmvaaei mqrykklqfe revlldpcrt wcpastcqav
      121 cqlqemglht pqlvqckacd tefcsackas whpgqgcpet mpitflpget ssafkldedd
      181 apikrcpkck vyierdegca qmmcknckha fcwyclesld ddfllihydk gpcrnklghs
      241 rasviwhrtq vvgifagfgl lllvaspfll latpfvlcck ckcskgdddp lpt
//
LOCUS       XP_061010745             293 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase RNF144A isoform X3 [Dama dama].
ACCESSION   XP_061010745
VERSION     XP_061010745.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154762.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..293
                     /product="E3 ubiquitin-protein ligase RNF144A isoform X3"
                     /calculated_mol_wt=32603
     Region          19..73
                     /region_name="mRING-HC-C4C4_RBR_RNF144A"
                     /note="Modified RING finger, HC subclass (C4C4-type),
                     found in RING finger protein 144A (RNF144A); cd16777"
                     /db_xref="CDD:438433"
     Region          100..164
                     /region_name="BRcat_RBR_RNF144A"
                     /note="BRcat domain found in RING finger protein 144A
                     (RNF144A); cd20366"
                     /db_xref="CDD:439027"
     Region          179..248
                     /region_name="Rcat_RBR_RNF144"
                     /note="Rcat domain found in the RNF144 protein subfamily;
                     cd20352"
                     /db_xref="CDD:439013"
     CDS             1..293
                     /gene="RNF144A"
                     /coded_by="XM_061154762.1:100..981"
                     /db_xref="GeneID:133064527"
ORIGIN      
        1 msaaracrps wdlaldplvs cklclgeypv eqmttisqcq cvfctlclkq yvellikegl
       61 etaiscpdaa cpkqghlqen eiecmvaaei mqrykklqfe revlldpcrt wcpastcqav
      121 cqlqemglht pqlvqckacd tefcsackas whpgqgcpet mpitflpget ssafkldedd
      181 apikrcpkck vyierdegca qmmcknckha fcwyclesld ddfllihydk gpcrnklghs
      241 rasviwhrtq vvgifagfgl lllvaspfll latpfvlcck ckcskgdddp lpt
//
LOCUS       XP_061010746             209 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase RNF144A isoform X1 [Dama dama].
ACCESSION   XP_061010746
VERSION     XP_061010746.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154763.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..209
                     /product="E3 ubiquitin-protein ligase RNF144A isoform X1"
                     /calculated_mol_wt=23338
     Region          16..80
                     /region_name="BRcat_RBR_RNF144A"
                     /note="BRcat domain found in RING finger protein 144A
                     (RNF144A); cd20366"
                     /db_xref="CDD:439027"
     Region          95..164
                     /region_name="Rcat_RBR_RNF144"
                     /note="Rcat domain found in the RNF144 protein subfamily;
                     cd20352"
                     /db_xref="CDD:439013"
     CDS             1..209
                     /gene="RNF144A"
                     /coded_by="XM_061154763.1:648..1277"
                     /db_xref="GeneID:133064527"
ORIGIN      
        1 mvaaeimqry kklqferevl ldpcrtwcpa stcqavcqlq emglhtpqlv qckacdtefc
       61 sackaswhpg qgcpetmpit flpgetssaf kldeddapik rcpkckvyie rdegcaqmmc
      121 knckhafcwy clesldddfl lihydkgpcr nklghsrasv iwhrtqvvgi fagfgllllv
      181 aspflllatp fvlcckckcs kgdddplpt
//
LOCUS       XP_061010748             227 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase RNF144A isoform X4 [Dama dama].
ACCESSION   XP_061010748
VERSION     XP_061010748.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154765.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..227
                     /product="E3 ubiquitin-protein ligase RNF144A isoform X4"
                     /calculated_mol_wt=25448
     Region          34..98
                     /region_name="BRcat_RBR_RNF144A"
                     /note="BRcat domain found in RING finger protein 144A
                     (RNF144A); cd20366"
                     /db_xref="CDD:439027"
     Region          113..182
                     /region_name="Rcat_RBR_RNF144"
                     /note="Rcat domain found in the RNF144 protein subfamily;
                     cd20352"
                     /db_xref="CDD:439013"
     CDS             1..227
                     /gene="RNF144A"
                     /coded_by="XM_061154765.1:303..986"
                     /db_xref="GeneID:133064527"
ORIGIN      
        1 mlpapnkatc rrmrhiecmv aaeimqrykk lqferevlld pcrtwcpast cqavcqlqem
       61 glhtpqlvqc kacdtefcsa ckaswhpgqg cpetmpitfl pgetssafkl deddapikrc
      121 pkckvyierd egcaqmmckn ckhafcwycl esldddflli hydkgpcrnk lghsrasviw
      181 hrtqvvgifa gfgllllvas pflllatpfv lcckckcskg dddplpt
//
LOCUS       XP_061010749             227 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase RNF144A isoform X4 [Dama dama].
ACCESSION   XP_061010749
VERSION     XP_061010749.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154766.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..227
                     /product="E3 ubiquitin-protein ligase RNF144A isoform X4"
                     /calculated_mol_wt=25448
     Region          34..98
                     /region_name="BRcat_RBR_RNF144A"
                     /note="BRcat domain found in RING finger protein 144A
                     (RNF144A); cd20366"
                     /db_xref="CDD:439027"
     Region          113..182
                     /region_name="Rcat_RBR_RNF144"
                     /note="Rcat domain found in the RNF144 protein subfamily;
                     cd20352"
                     /db_xref="CDD:439013"
     CDS             1..227
                     /gene="RNF144A"
                     /coded_by="XM_061154766.1:83..766"
                     /db_xref="GeneID:133064527"
ORIGIN      
        1 mlpapnkatc rrmrhiecmv aaeimqrykk lqferevlld pcrtwcpast cqavcqlqem
       61 glhtpqlvqc kacdtefcsa ckaswhpgqg cpetmpitfl pgetssafkl deddapikrc
      121 pkckvyierd egcaqmmckn ckhafcwycl esldddflli hydkgpcrnk lghsrasviw
      181 hrtqvvgifa gfgllllvas pflllatpfv lcckckcskg dddplpt
//
LOCUS       XP_061010750             227 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase RNF144A isoform X4 [Dama dama].
ACCESSION   XP_061010750
VERSION     XP_061010750.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154767.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..227
                     /product="E3 ubiquitin-protein ligase RNF144A isoform X4"
                     /calculated_mol_wt=25448
     Region          34..98
                     /region_name="BRcat_RBR_RNF144A"
                     /note="BRcat domain found in RING finger protein 144A
                     (RNF144A); cd20366"
                     /db_xref="CDD:439027"
     Region          113..182
                     /region_name="Rcat_RBR_RNF144"
                     /note="Rcat domain found in the RNF144 protein subfamily;
                     cd20352"
                     /db_xref="CDD:439013"
     CDS             1..227
                     /gene="RNF144A"
                     /coded_by="XM_061154767.1:138..821"
                     /db_xref="GeneID:133064527"
ORIGIN      
        1 mlpapnkatc rrmrhiecmv aaeimqrykk lqferevlld pcrtwcpast cqavcqlqem
       61 glhtpqlvqc kacdtefcsa ckaswhpgqg cpetmpitfl pgetssafkl deddapikrc
      121 pkckvyierd egcaqmmckn ckhafcwycl esldddflli hydkgpcrnk lghsrasviw
      181 hrtqvvgifa gfgllllvas pflllatpfv lcckckcskg dddplpt
//
LOCUS       XP_061010751             209 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase RNF144A isoform X1 [Dama dama].
ACCESSION   XP_061010751
VERSION     XP_061010751.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154768.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..209
                     /product="E3 ubiquitin-protein ligase RNF144A isoform X1"
                     /calculated_mol_wt=23338
     Region          16..80
                     /region_name="BRcat_RBR_RNF144A"
                     /note="BRcat domain found in RING finger protein 144A
                     (RNF144A); cd20366"
                     /db_xref="CDD:439027"
     Region          95..164
                     /region_name="Rcat_RBR_RNF144"
                     /note="Rcat domain found in the RNF144 protein subfamily;
                     cd20352"
                     /db_xref="CDD:439013"
     CDS             1..209
                     /gene="RNF144A"
                     /coded_by="XM_061154768.1:482..1111"
                     /db_xref="GeneID:133064527"
ORIGIN      
        1 mvaaeimqry kklqferevl ldpcrtwcpa stcqavcqlq emglhtpqlv qckacdtefc
       61 sackaswhpg qgcpetmpit flpgetssaf kldeddapik rcpkckvyie rdegcaqmmc
      121 knckhafcwy clesldddfl lihydkgpcr nklghsrasv iwhrtqvvgi fagfgllllv
      181 aspflllatp fvlcckckcs kgdddplpt
//
LOCUS       XP_061010752             209 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase RNF144A isoform X1 [Dama dama].
ACCESSION   XP_061010752
VERSION     XP_061010752.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154769.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..209
                     /product="E3 ubiquitin-protein ligase RNF144A isoform X1"
                     /calculated_mol_wt=23338
     Region          16..80
                     /region_name="BRcat_RBR_RNF144A"
                     /note="BRcat domain found in RING finger protein 144A
                     (RNF144A); cd20366"
                     /db_xref="CDD:439027"
     Region          95..164
                     /region_name="Rcat_RBR_RNF144"
                     /note="Rcat domain found in the RNF144 protein subfamily;
                     cd20352"
                     /db_xref="CDD:439013"
     CDS             1..209
                     /gene="RNF144A"
                     /coded_by="XM_061154769.1:411..1040"
                     /db_xref="GeneID:133064527"
ORIGIN      
        1 mvaaeimqry kklqferevl ldpcrtwcpa stcqavcqlq emglhtpqlv qckacdtefc
       61 sackaswhpg qgcpetmpit flpgetssaf kldeddapik rcpkckvyie rdegcaqmmc
      121 knckhafcwy clesldddfl lihydkgpcr nklghsrasv iwhrtqvvgi fagfgllllv
      181 aspflllatp fvlcckckcs kgdddplpt
//
LOCUS       XP_061010753             209 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase RNF144A isoform X1 [Dama dama].
ACCESSION   XP_061010753
VERSION     XP_061010753.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154770.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..209
                     /product="E3 ubiquitin-protein ligase RNF144A isoform X1"
                     /calculated_mol_wt=23338
     Region          16..80
                     /region_name="BRcat_RBR_RNF144A"
                     /note="BRcat domain found in RING finger protein 144A
                     (RNF144A); cd20366"
                     /db_xref="CDD:439027"
     Region          95..164
                     /region_name="Rcat_RBR_RNF144"
                     /note="Rcat domain found in the RNF144 protein subfamily;
                     cd20352"
                     /db_xref="CDD:439013"
     CDS             1..209
                     /gene="RNF144A"
                     /coded_by="XM_061154770.1:437..1066"
                     /db_xref="GeneID:133064527"
ORIGIN      
        1 mvaaeimqry kklqferevl ldpcrtwcpa stcqavcqlq emglhtpqlv qckacdtefc
       61 sackaswhpg qgcpetmpit flpgetssaf kldeddapik rcpkckvyie rdegcaqmmc
      121 knckhafcwy clesldddfl lihydkgpcr nklghsrasv iwhrtqvvgi fagfgllllv
      181 aspflllatp fvlcckckcs kgdddplpt
//
LOCUS       XP_061010754             209 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase RNF144A isoform X1 [Dama dama].
ACCESSION   XP_061010754
VERSION     XP_061010754.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154771.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..209
                     /product="E3 ubiquitin-protein ligase RNF144A isoform X1"
                     /calculated_mol_wt=23338
     Region          16..80
                     /region_name="BRcat_RBR_RNF144A"
                     /note="BRcat domain found in RING finger protein 144A
                     (RNF144A); cd20366"
                     /db_xref="CDD:439027"
     Region          95..164
                     /region_name="Rcat_RBR_RNF144"
                     /note="Rcat domain found in the RNF144 protein subfamily;
                     cd20352"
                     /db_xref="CDD:439013"
     CDS             1..209
                     /gene="RNF144A"
                     /coded_by="XM_061154771.1:371..1000"
                     /db_xref="GeneID:133064527"
ORIGIN      
        1 mvaaeimqry kklqferevl ldpcrtwcpa stcqavcqlq emglhtpqlv qckacdtefc
       61 sackaswhpg qgcpetmpit flpgetssaf kldeddapik rcpkckvyie rdegcaqmmc
      121 knckhafcwy clesldddfl lihydkgpcr nklghsrasv iwhrtqvvgi fagfgllllv
      181 aspflllatp fvlcckckcs kgdddplpt
//
LOCUS       XP_061010755             209 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase RNF144A isoform X1 [Dama dama].
ACCESSION   XP_061010755
VERSION     XP_061010755.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154772.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..209
                     /product="E3 ubiquitin-protein ligase RNF144A isoform X1"
                     /calculated_mol_wt=23338
     Region          16..80
                     /region_name="BRcat_RBR_RNF144A"
                     /note="BRcat domain found in RING finger protein 144A
                     (RNF144A); cd20366"
                     /db_xref="CDD:439027"
     Region          95..164
                     /region_name="Rcat_RBR_RNF144"
                     /note="Rcat domain found in the RNF144 protein subfamily;
                     cd20352"
                     /db_xref="CDD:439013"
     CDS             1..209
                     /gene="RNF144A"
                     /coded_by="XM_061154772.1:307..936"
                     /db_xref="GeneID:133064527"
ORIGIN      
        1 mvaaeimqry kklqferevl ldpcrtwcpa stcqavcqlq emglhtpqlv qckacdtefc
       61 sackaswhpg qgcpetmpit flpgetssaf kldeddapik rcpkckvyie rdegcaqmmc
      121 knckhafcwy clesldddfl lihydkgpcr nklghsrasv iwhrtqvvgi fagfgllllv
      181 aspflllatp fvlcckckcs kgdddplpt
//
LOCUS       XP_061010756             134 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA-binding protein inhibitor ID-2 [Dama dama].
ACCESSION   XP_061010756
VERSION     XP_061010756.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154773.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..134
                     /product="DNA-binding protein inhibitor ID-2"
                     /calculated_mol_wt=14729
     Region          18..83
                     /region_name="bHLH_dnHLH_ID2"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     DNA-binding protein inhibitor ID2 and similar proteins;
                     cd19692"
                     /db_xref="CDD:381535"
     Site            order(35,38..39,42..43,45..46,49,61..62,65..66,68..69,
                     71..73,75..76,79,83)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381535"
     CDS             1..134
                     /gene="ID2"
                     /coded_by="XM_061154773.1:144..548"
                     /db_xref="GeneID:133064532"
ORIGIN      
        1 mkafspvrsv rknslsdhgl gisrsktpvd dpmsllynmn dcysklkelv psipqnkkvs
       61 kmeilqhvid yildlqiald shptivslhh qrpgqsqasr tplttlntdi silslqasef
      121 pselmsndsk alcg
//
LOCUS       XP_061010757            1752 aa            linear   MAM 02-DEC-2023
DEFINITION  kinase D-interacting substrate of 220 kDa isoform X1 [Dama dama].
ACCESSION   XP_061010757
VERSION     XP_061010757.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154774.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1752
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1752
                     /product="kinase D-interacting substrate of 220 kDa
                     isoform X1"
                     /calculated_mol_wt=194222
     Region          18..307
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          38..68
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(39,43..44,47..49,51..52,56,59,68,70,72,76..77,
                     80..82,84..85,89,92,101,103,105,109..110,113..115,
                     117..118,122,125)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          70..101
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          103..132
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          170..198
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          236..267
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          269..299
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          274..366
                     /region_name="Ank_2"
                     /note="Ankyrin repeats (3 copies); pfam12796"
                     /db_xref="CDD:463710"
     Region          302..332
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          335..366
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <349..413
                     /region_name="PHA02736"
                     /note="Viral ankyrin protein; Provisional"
                     /db_xref="CDD:165103"
     Region          441..954
                     /region_name="KAP_NTPase"
                     /note="KAP family P-loop domain; pfam07693"
                     /db_xref="CDD:462231"
     CDS             1..1752
                     /gene="KIDINS220"
                     /coded_by="XM_061154774.1:416..5674"
                     /db_xref="GeneID:133064533"
ORIGIN      
        1 msvlisqsvi nyveeenipa lkallekckd vdernecgqt plmiaaeqgn leivkelikn
       61 gancnledld nwtalisask eghlhiveel lkcganlehr dmggwtalmw acykgrtevv
      121 elllshganp svtglqysvy piiwaagrgh adivqlllqn gakvncsdky gttplvwaar
      181 kghlecvkhl lamgadvdqe gansmtaliv avkggytqsv keilkrnpnv nltdkdgnta
      241 lmiaskeght eivqdlldag tyvnipdrsg dtvligavrg ghveivrall qkyadidirg
      301 qdnktalywa vekgnatmvr dilqcnpdte ictkdgetpl ikatkmrnie vvellldkga
      361 kvsaidkkgd tplhiairgr srklaelllr npkdgrllyr pnkagetpyn idcshqksil
      421 tqifgarhls ptetdgdmlg ydlyssalad ilseptmqpp icvglyaqwg sgksfllkkl
      481 edemktfagq qieplfqfsw lvvfltlllc gglgllfaft vdpnlgiavs lsflavlyif
      541 fiviyfggrr egeswnwawv lstrlarhig ylelllklmf vnppelpeqt tkalpvrflf
      601 tdynrlssvg getsmaemia tlsdaceref gflatrlfrv fktedtqgkk kwkktcclps
      661 fviflfifgc iiagitllai frvdpkhmtv navlisiasi vglafvlncr twwqvldsll
      721 nsqrkrlhha asklhklkse gfmkvlkcev elmarmakti dsftqnqtrl vviidgldac
      781 eqdkvlqmld tvrvlfskgp fiaifasdph iiikainqnl nsvlrdsnin ghdymrnivh
      841 lpvflnsrgl ssarkflvts ttngdvpcsd nagmqedadr rvsqnslgem tklgsktaln
      901 rrdtyrrrqm qrtitrqmsf dltkllvted wfsdispqtm rrllnivsvt grllranqis
      961 fnwdrlaswi nlteqwpyrt swlilyleet egipdqmtlk tiyeriskni pttkdvepll
     1021 eidgdirnfe vflssrtpvl vardvktflp ctvnldpklr eiiadvraar dqinigglay
     1081 pplplheppp rppsgysqpa svcssstsfn gpfgggvvsp qphssyysgm tgpqhpfynr
     1141 pffapylytp rycpggshhl isrpsvktnl prdqsnglgs gpasgtvpln smnvdavcek
     1201 lkqiegldqs mlpqycatik kaningrvla qcnidelkke mnmnfgdwhl frstilemrn
     1261 aenqvvpedp rllsensssv phgeparrsa hselphtels sqapytlnfs feelntlgld
     1321 egaprhsnls wqsqtrrtps lssltsqdss ieiskltdkv qaeyrdayre yiaqmsqleg
     1381 gtgsttmsgr ssphstyymg qsssggsihs slepekgkds epkqddtrks flmkrgdvid
     1441 ysssgvstnd aspldpitee deksdqsgsk llpgkksser sslfqtdlkl kggglryqkl
     1501 psdedesgte esdntpllkd dkdkkaegka eralkspehs aepirtfika keylsdalld
     1561 kkdssdsgvr snesspnhsl hneaaddsql ekanlieled dphsgrrgvp hslsglpdpl
     1621 varmsicsed kkspsecsli asspeenwpa chkaynlnrt pstvtlnnns apanranqns
     1681 deteglremp qvllrsgsss hstalqnenl ksmahkrgqr ssytrlskds selhavassd
     1741 stgfgeeres il
//
LOCUS       XP_061010758            1752 aa            linear   MAM 02-DEC-2023
DEFINITION  kinase D-interacting substrate of 220 kDa isoform X1 [Dama dama].
ACCESSION   XP_061010758
VERSION     XP_061010758.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154775.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1752
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1752
                     /product="kinase D-interacting substrate of 220 kDa
                     isoform X1"
                     /calculated_mol_wt=194222
     Region          18..307
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          38..68
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(39,43..44,47..49,51..52,56,59,68,70,72,76..77,
                     80..82,84..85,89,92,101,103,105,109..110,113..115,
                     117..118,122,125)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          70..101
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          103..132
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          170..198
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          236..267
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          269..299
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          274..366
                     /region_name="Ank_2"
                     /note="Ankyrin repeats (3 copies); pfam12796"
                     /db_xref="CDD:463710"
     Region          302..332
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          335..366
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <349..413
                     /region_name="PHA02736"
                     /note="Viral ankyrin protein; Provisional"
                     /db_xref="CDD:165103"
     Region          441..954
                     /region_name="KAP_NTPase"
                     /note="KAP family P-loop domain; pfam07693"
                     /db_xref="CDD:462231"
     CDS             1..1752
                     /gene="KIDINS220"
                     /coded_by="XM_061154775.1:317..5575"
                     /db_xref="GeneID:133064533"
ORIGIN      
        1 msvlisqsvi nyveeenipa lkallekckd vdernecgqt plmiaaeqgn leivkelikn
       61 gancnledld nwtalisask eghlhiveel lkcganlehr dmggwtalmw acykgrtevv
      121 elllshganp svtglqysvy piiwaagrgh adivqlllqn gakvncsdky gttplvwaar
      181 kghlecvkhl lamgadvdqe gansmtaliv avkggytqsv keilkrnpnv nltdkdgnta
      241 lmiaskeght eivqdlldag tyvnipdrsg dtvligavrg ghveivrall qkyadidirg
      301 qdnktalywa vekgnatmvr dilqcnpdte ictkdgetpl ikatkmrnie vvellldkga
      361 kvsaidkkgd tplhiairgr srklaelllr npkdgrllyr pnkagetpyn idcshqksil
      421 tqifgarhls ptetdgdmlg ydlyssalad ilseptmqpp icvglyaqwg sgksfllkkl
      481 edemktfagq qieplfqfsw lvvfltlllc gglgllfaft vdpnlgiavs lsflavlyif
      541 fiviyfggrr egeswnwawv lstrlarhig ylelllklmf vnppelpeqt tkalpvrflf
      601 tdynrlssvg getsmaemia tlsdaceref gflatrlfrv fktedtqgkk kwkktcclps
      661 fviflfifgc iiagitllai frvdpkhmtv navlisiasi vglafvlncr twwqvldsll
      721 nsqrkrlhha asklhklkse gfmkvlkcev elmarmakti dsftqnqtrl vviidgldac
      781 eqdkvlqmld tvrvlfskgp fiaifasdph iiikainqnl nsvlrdsnin ghdymrnivh
      841 lpvflnsrgl ssarkflvts ttngdvpcsd nagmqedadr rvsqnslgem tklgsktaln
      901 rrdtyrrrqm qrtitrqmsf dltkllvted wfsdispqtm rrllnivsvt grllranqis
      961 fnwdrlaswi nlteqwpyrt swlilyleet egipdqmtlk tiyeriskni pttkdvepll
     1021 eidgdirnfe vflssrtpvl vardvktflp ctvnldpklr eiiadvraar dqinigglay
     1081 pplplheppp rppsgysqpa svcssstsfn gpfgggvvsp qphssyysgm tgpqhpfynr
     1141 pffapylytp rycpggshhl isrpsvktnl prdqsnglgs gpasgtvpln smnvdavcek
     1201 lkqiegldqs mlpqycatik kaningrvla qcnidelkke mnmnfgdwhl frstilemrn
     1261 aenqvvpedp rllsensssv phgeparrsa hselphtels sqapytlnfs feelntlgld
     1321 egaprhsnls wqsqtrrtps lssltsqdss ieiskltdkv qaeyrdayre yiaqmsqleg
     1381 gtgsttmsgr ssphstyymg qsssggsihs slepekgkds epkqddtrks flmkrgdvid
     1441 ysssgvstnd aspldpitee deksdqsgsk llpgkksser sslfqtdlkl kggglryqkl
     1501 psdedesgte esdntpllkd dkdkkaegka eralkspehs aepirtfika keylsdalld
     1561 kkdssdsgvr snesspnhsl hneaaddsql ekanlieled dphsgrrgvp hslsglpdpl
     1621 varmsicsed kkspsecsli asspeenwpa chkaynlnrt pstvtlnnns apanranqns
     1681 deteglremp qvllrsgsss hstalqnenl ksmahkrgqr ssytrlskds selhavassd
     1741 stgfgeeres il
//
LOCUS       XP_061010759            1752 aa            linear   MAM 02-DEC-2023
DEFINITION  kinase D-interacting substrate of 220 kDa isoform X1 [Dama dama].
ACCESSION   XP_061010759
VERSION     XP_061010759.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154776.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1752
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1752
                     /product="kinase D-interacting substrate of 220 kDa
                     isoform X1"
                     /calculated_mol_wt=194222
     Region          18..307
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          38..68
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(39,43..44,47..49,51..52,56,59,68,70,72,76..77,
                     80..82,84..85,89,92,101,103,105,109..110,113..115,
                     117..118,122,125)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          70..101
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          103..132
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          170..198
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          236..267
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          269..299
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          274..366
                     /region_name="Ank_2"
                     /note="Ankyrin repeats (3 copies); pfam12796"
                     /db_xref="CDD:463710"
     Region          302..332
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          335..366
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <349..413
                     /region_name="PHA02736"
                     /note="Viral ankyrin protein; Provisional"
                     /db_xref="CDD:165103"
     Region          441..954
                     /region_name="KAP_NTPase"
                     /note="KAP family P-loop domain; pfam07693"
                     /db_xref="CDD:462231"
     CDS             1..1752
                     /gene="KIDINS220"
                     /coded_by="XM_061154776.1:281..5539"
                     /db_xref="GeneID:133064533"
ORIGIN      
        1 msvlisqsvi nyveeenipa lkallekckd vdernecgqt plmiaaeqgn leivkelikn
       61 gancnledld nwtalisask eghlhiveel lkcganlehr dmggwtalmw acykgrtevv
      121 elllshganp svtglqysvy piiwaagrgh adivqlllqn gakvncsdky gttplvwaar
      181 kghlecvkhl lamgadvdqe gansmtaliv avkggytqsv keilkrnpnv nltdkdgnta
      241 lmiaskeght eivqdlldag tyvnipdrsg dtvligavrg ghveivrall qkyadidirg
      301 qdnktalywa vekgnatmvr dilqcnpdte ictkdgetpl ikatkmrnie vvellldkga
      361 kvsaidkkgd tplhiairgr srklaelllr npkdgrllyr pnkagetpyn idcshqksil
      421 tqifgarhls ptetdgdmlg ydlyssalad ilseptmqpp icvglyaqwg sgksfllkkl
      481 edemktfagq qieplfqfsw lvvfltlllc gglgllfaft vdpnlgiavs lsflavlyif
      541 fiviyfggrr egeswnwawv lstrlarhig ylelllklmf vnppelpeqt tkalpvrflf
      601 tdynrlssvg getsmaemia tlsdaceref gflatrlfrv fktedtqgkk kwkktcclps
      661 fviflfifgc iiagitllai frvdpkhmtv navlisiasi vglafvlncr twwqvldsll
      721 nsqrkrlhha asklhklkse gfmkvlkcev elmarmakti dsftqnqtrl vviidgldac
      781 eqdkvlqmld tvrvlfskgp fiaifasdph iiikainqnl nsvlrdsnin ghdymrnivh
      841 lpvflnsrgl ssarkflvts ttngdvpcsd nagmqedadr rvsqnslgem tklgsktaln
      901 rrdtyrrrqm qrtitrqmsf dltkllvted wfsdispqtm rrllnivsvt grllranqis
      961 fnwdrlaswi nlteqwpyrt swlilyleet egipdqmtlk tiyeriskni pttkdvepll
     1021 eidgdirnfe vflssrtpvl vardvktflp ctvnldpklr eiiadvraar dqinigglay
     1081 pplplheppp rppsgysqpa svcssstsfn gpfgggvvsp qphssyysgm tgpqhpfynr
     1141 pffapylytp rycpggshhl isrpsvktnl prdqsnglgs gpasgtvpln smnvdavcek
     1201 lkqiegldqs mlpqycatik kaningrvla qcnidelkke mnmnfgdwhl frstilemrn
     1261 aenqvvpedp rllsensssv phgeparrsa hselphtels sqapytlnfs feelntlgld
     1321 egaprhsnls wqsqtrrtps lssltsqdss ieiskltdkv qaeyrdayre yiaqmsqleg
     1381 gtgsttmsgr ssphstyymg qsssggsihs slepekgkds epkqddtrks flmkrgdvid
     1441 ysssgvstnd aspldpitee deksdqsgsk llpgkksser sslfqtdlkl kggglryqkl
     1501 psdedesgte esdntpllkd dkdkkaegka eralkspehs aepirtfika keylsdalld
     1561 kkdssdsgvr snesspnhsl hneaaddsql ekanlieled dphsgrrgvp hslsglpdpl
     1621 varmsicsed kkspsecsli asspeenwpa chkaynlnrt pstvtlnnns apanranqns
     1681 deteglremp qvllrsgsss hstalqnenl ksmahkrgqr ssytrlskds selhavassd
     1741 stgfgeeres il
//
LOCUS       XP_061010760            1752 aa            linear   MAM 02-DEC-2023
DEFINITION  kinase D-interacting substrate of 220 kDa isoform X1 [Dama dama].
ACCESSION   XP_061010760
VERSION     XP_061010760.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154777.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1752
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1752
                     /product="kinase D-interacting substrate of 220 kDa
                     isoform X1"
                     /calculated_mol_wt=194222
     Region          18..307
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          38..68
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(39,43..44,47..49,51..52,56,59,68,70,72,76..77,
                     80..82,84..85,89,92,101,103,105,109..110,113..115,
                     117..118,122,125)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          70..101
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          103..132
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          170..198
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          236..267
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          269..299
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          274..366
                     /region_name="Ank_2"
                     /note="Ankyrin repeats (3 copies); pfam12796"
                     /db_xref="CDD:463710"
     Region          302..332
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          335..366
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <349..413
                     /region_name="PHA02736"
                     /note="Viral ankyrin protein; Provisional"
                     /db_xref="CDD:165103"
     Region          441..954
                     /region_name="KAP_NTPase"
                     /note="KAP family P-loop domain; pfam07693"
                     /db_xref="CDD:462231"
     CDS             1..1752
                     /gene="KIDINS220"
                     /coded_by="XM_061154777.1:664..5922"
                     /db_xref="GeneID:133064533"
ORIGIN      
        1 msvlisqsvi nyveeenipa lkallekckd vdernecgqt plmiaaeqgn leivkelikn
       61 gancnledld nwtalisask eghlhiveel lkcganlehr dmggwtalmw acykgrtevv
      121 elllshganp svtglqysvy piiwaagrgh adivqlllqn gakvncsdky gttplvwaar
      181 kghlecvkhl lamgadvdqe gansmtaliv avkggytqsv keilkrnpnv nltdkdgnta
      241 lmiaskeght eivqdlldag tyvnipdrsg dtvligavrg ghveivrall qkyadidirg
      301 qdnktalywa vekgnatmvr dilqcnpdte ictkdgetpl ikatkmrnie vvellldkga
      361 kvsaidkkgd tplhiairgr srklaelllr npkdgrllyr pnkagetpyn idcshqksil
      421 tqifgarhls ptetdgdmlg ydlyssalad ilseptmqpp icvglyaqwg sgksfllkkl
      481 edemktfagq qieplfqfsw lvvfltlllc gglgllfaft vdpnlgiavs lsflavlyif
      541 fiviyfggrr egeswnwawv lstrlarhig ylelllklmf vnppelpeqt tkalpvrflf
      601 tdynrlssvg getsmaemia tlsdaceref gflatrlfrv fktedtqgkk kwkktcclps
      661 fviflfifgc iiagitllai frvdpkhmtv navlisiasi vglafvlncr twwqvldsll
      721 nsqrkrlhha asklhklkse gfmkvlkcev elmarmakti dsftqnqtrl vviidgldac
      781 eqdkvlqmld tvrvlfskgp fiaifasdph iiikainqnl nsvlrdsnin ghdymrnivh
      841 lpvflnsrgl ssarkflvts ttngdvpcsd nagmqedadr rvsqnslgem tklgsktaln
      901 rrdtyrrrqm qrtitrqmsf dltkllvted wfsdispqtm rrllnivsvt grllranqis
      961 fnwdrlaswi nlteqwpyrt swlilyleet egipdqmtlk tiyeriskni pttkdvepll
     1021 eidgdirnfe vflssrtpvl vardvktflp ctvnldpklr eiiadvraar dqinigglay
     1081 pplplheppp rppsgysqpa svcssstsfn gpfgggvvsp qphssyysgm tgpqhpfynr
     1141 pffapylytp rycpggshhl isrpsvktnl prdqsnglgs gpasgtvpln smnvdavcek
     1201 lkqiegldqs mlpqycatik kaningrvla qcnidelkke mnmnfgdwhl frstilemrn
     1261 aenqvvpedp rllsensssv phgeparrsa hselphtels sqapytlnfs feelntlgld
     1321 egaprhsnls wqsqtrrtps lssltsqdss ieiskltdkv qaeyrdayre yiaqmsqleg
     1381 gtgsttmsgr ssphstyymg qsssggsihs slepekgkds epkqddtrks flmkrgdvid
     1441 ysssgvstnd aspldpitee deksdqsgsk llpgkksser sslfqtdlkl kggglryqkl
     1501 psdedesgte esdntpllkd dkdkkaegka eralkspehs aepirtfika keylsdalld
     1561 kkdssdsgvr snesspnhsl hneaaddsql ekanlieled dphsgrrgvp hslsglpdpl
     1621 varmsicsed kkspsecsli asspeenwpa chkaynlnrt pstvtlnnns apanranqns
     1681 deteglremp qvllrsgsss hstalqnenl ksmahkrgqr ssytrlskds selhavassd
     1741 stgfgeeres il
//
LOCUS       XP_061010761            1752 aa            linear   MAM 02-DEC-2023
DEFINITION  kinase D-interacting substrate of 220 kDa isoform X1 [Dama dama].
ACCESSION   XP_061010761
VERSION     XP_061010761.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154778.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1752
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1752
                     /product="kinase D-interacting substrate of 220 kDa
                     isoform X1"
                     /calculated_mol_wt=194222
     Region          18..307
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          38..68
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(39,43..44,47..49,51..52,56,59,68,70,72,76..77,
                     80..82,84..85,89,92,101,103,105,109..110,113..115,
                     117..118,122,125)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          70..101
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          103..132
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          170..198
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          236..267
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          269..299
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          274..366
                     /region_name="Ank_2"
                     /note="Ankyrin repeats (3 copies); pfam12796"
                     /db_xref="CDD:463710"
     Region          302..332
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          335..366
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <349..413
                     /region_name="PHA02736"
                     /note="Viral ankyrin protein; Provisional"
                     /db_xref="CDD:165103"
     Region          441..954
                     /region_name="KAP_NTPase"
                     /note="KAP family P-loop domain; pfam07693"
                     /db_xref="CDD:462231"
     CDS             1..1752
                     /gene="KIDINS220"
                     /coded_by="XM_061154778.1:226..5484"
                     /db_xref="GeneID:133064533"
ORIGIN      
        1 msvlisqsvi nyveeenipa lkallekckd vdernecgqt plmiaaeqgn leivkelikn
       61 gancnledld nwtalisask eghlhiveel lkcganlehr dmggwtalmw acykgrtevv
      121 elllshganp svtglqysvy piiwaagrgh adivqlllqn gakvncsdky gttplvwaar
      181 kghlecvkhl lamgadvdqe gansmtaliv avkggytqsv keilkrnpnv nltdkdgnta
      241 lmiaskeght eivqdlldag tyvnipdrsg dtvligavrg ghveivrall qkyadidirg
      301 qdnktalywa vekgnatmvr dilqcnpdte ictkdgetpl ikatkmrnie vvellldkga
      361 kvsaidkkgd tplhiairgr srklaelllr npkdgrllyr pnkagetpyn idcshqksil
      421 tqifgarhls ptetdgdmlg ydlyssalad ilseptmqpp icvglyaqwg sgksfllkkl
      481 edemktfagq qieplfqfsw lvvfltlllc gglgllfaft vdpnlgiavs lsflavlyif
      541 fiviyfggrr egeswnwawv lstrlarhig ylelllklmf vnppelpeqt tkalpvrflf
      601 tdynrlssvg getsmaemia tlsdaceref gflatrlfrv fktedtqgkk kwkktcclps
      661 fviflfifgc iiagitllai frvdpkhmtv navlisiasi vglafvlncr twwqvldsll
      721 nsqrkrlhha asklhklkse gfmkvlkcev elmarmakti dsftqnqtrl vviidgldac
      781 eqdkvlqmld tvrvlfskgp fiaifasdph iiikainqnl nsvlrdsnin ghdymrnivh
      841 lpvflnsrgl ssarkflvts ttngdvpcsd nagmqedadr rvsqnslgem tklgsktaln
      901 rrdtyrrrqm qrtitrqmsf dltkllvted wfsdispqtm rrllnivsvt grllranqis
      961 fnwdrlaswi nlteqwpyrt swlilyleet egipdqmtlk tiyeriskni pttkdvepll
     1021 eidgdirnfe vflssrtpvl vardvktflp ctvnldpklr eiiadvraar dqinigglay
     1081 pplplheppp rppsgysqpa svcssstsfn gpfgggvvsp qphssyysgm tgpqhpfynr
     1141 pffapylytp rycpggshhl isrpsvktnl prdqsnglgs gpasgtvpln smnvdavcek
     1201 lkqiegldqs mlpqycatik kaningrvla qcnidelkke mnmnfgdwhl frstilemrn
     1261 aenqvvpedp rllsensssv phgeparrsa hselphtels sqapytlnfs feelntlgld
     1321 egaprhsnls wqsqtrrtps lssltsqdss ieiskltdkv qaeyrdayre yiaqmsqleg
     1381 gtgsttmsgr ssphstyymg qsssggsihs slepekgkds epkqddtrks flmkrgdvid
     1441 ysssgvstnd aspldpitee deksdqsgsk llpgkksser sslfqtdlkl kggglryqkl
     1501 psdedesgte esdntpllkd dkdkkaegka eralkspehs aepirtfika keylsdalld
     1561 kkdssdsgvr snesspnhsl hneaaddsql ekanlieled dphsgrrgvp hslsglpdpl
     1621 varmsicsed kkspsecsli asspeenwpa chkaynlnrt pstvtlnnns apanranqns
     1681 deteglremp qvllrsgsss hstalqnenl ksmahkrgqr ssytrlskds selhavassd
     1741 stgfgeeres il
//
LOCUS       XP_061010762            1752 aa            linear   MAM 02-DEC-2023
DEFINITION  kinase D-interacting substrate of 220 kDa isoform X1 [Dama dama].
ACCESSION   XP_061010762
VERSION     XP_061010762.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154779.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1752
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1752
                     /product="kinase D-interacting substrate of 220 kDa
                     isoform X1"
                     /calculated_mol_wt=194222
     Region          18..307
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          38..68
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(39,43..44,47..49,51..52,56,59,68,70,72,76..77,
                     80..82,84..85,89,92,101,103,105,109..110,113..115,
                     117..118,122,125)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          70..101
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          103..132
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          170..198
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          236..267
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          269..299
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          274..366
                     /region_name="Ank_2"
                     /note="Ankyrin repeats (3 copies); pfam12796"
                     /db_xref="CDD:463710"
     Region          302..332
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          335..366
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <349..413
                     /region_name="PHA02736"
                     /note="Viral ankyrin protein; Provisional"
                     /db_xref="CDD:165103"
     Region          441..954
                     /region_name="KAP_NTPase"
                     /note="KAP family P-loop domain; pfam07693"
                     /db_xref="CDD:462231"
     CDS             1..1752
                     /gene="KIDINS220"
                     /coded_by="XM_061154779.1:182..5440"
                     /db_xref="GeneID:133064533"
ORIGIN      
        1 msvlisqsvi nyveeenipa lkallekckd vdernecgqt plmiaaeqgn leivkelikn
       61 gancnledld nwtalisask eghlhiveel lkcganlehr dmggwtalmw acykgrtevv
      121 elllshganp svtglqysvy piiwaagrgh adivqlllqn gakvncsdky gttplvwaar
      181 kghlecvkhl lamgadvdqe gansmtaliv avkggytqsv keilkrnpnv nltdkdgnta
      241 lmiaskeght eivqdlldag tyvnipdrsg dtvligavrg ghveivrall qkyadidirg
      301 qdnktalywa vekgnatmvr dilqcnpdte ictkdgetpl ikatkmrnie vvellldkga
      361 kvsaidkkgd tplhiairgr srklaelllr npkdgrllyr pnkagetpyn idcshqksil
      421 tqifgarhls ptetdgdmlg ydlyssalad ilseptmqpp icvglyaqwg sgksfllkkl
      481 edemktfagq qieplfqfsw lvvfltlllc gglgllfaft vdpnlgiavs lsflavlyif
      541 fiviyfggrr egeswnwawv lstrlarhig ylelllklmf vnppelpeqt tkalpvrflf
      601 tdynrlssvg getsmaemia tlsdaceref gflatrlfrv fktedtqgkk kwkktcclps
      661 fviflfifgc iiagitllai frvdpkhmtv navlisiasi vglafvlncr twwqvldsll
      721 nsqrkrlhha asklhklkse gfmkvlkcev elmarmakti dsftqnqtrl vviidgldac
      781 eqdkvlqmld tvrvlfskgp fiaifasdph iiikainqnl nsvlrdsnin ghdymrnivh
      841 lpvflnsrgl ssarkflvts ttngdvpcsd nagmqedadr rvsqnslgem tklgsktaln
      901 rrdtyrrrqm qrtitrqmsf dltkllvted wfsdispqtm rrllnivsvt grllranqis
      961 fnwdrlaswi nlteqwpyrt swlilyleet egipdqmtlk tiyeriskni pttkdvepll
     1021 eidgdirnfe vflssrtpvl vardvktflp ctvnldpklr eiiadvraar dqinigglay
     1081 pplplheppp rppsgysqpa svcssstsfn gpfgggvvsp qphssyysgm tgpqhpfynr
     1141 pffapylytp rycpggshhl isrpsvktnl prdqsnglgs gpasgtvpln smnvdavcek
     1201 lkqiegldqs mlpqycatik kaningrvla qcnidelkke mnmnfgdwhl frstilemrn
     1261 aenqvvpedp rllsensssv phgeparrsa hselphtels sqapytlnfs feelntlgld
     1321 egaprhsnls wqsqtrrtps lssltsqdss ieiskltdkv qaeyrdayre yiaqmsqleg
     1381 gtgsttmsgr ssphstyymg qsssggsihs slepekgkds epkqddtrks flmkrgdvid
     1441 ysssgvstnd aspldpitee deksdqsgsk llpgkksser sslfqtdlkl kggglryqkl
     1501 psdedesgte esdntpllkd dkdkkaegka eralkspehs aepirtfika keylsdalld
     1561 kkdssdsgvr snesspnhsl hneaaddsql ekanlieled dphsgrrgvp hslsglpdpl
     1621 varmsicsed kkspsecsli asspeenwpa chkaynlnrt pstvtlnnns apanranqns
     1681 deteglremp qvllrsgsss hstalqnenl ksmahkrgqr ssytrlskds selhavassd
     1741 stgfgeeres il
//
LOCUS       XP_061010763            1752 aa            linear   MAM 02-DEC-2023
DEFINITION  kinase D-interacting substrate of 220 kDa isoform X1 [Dama dama].
ACCESSION   XP_061010763
VERSION     XP_061010763.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154780.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1752
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1752
                     /product="kinase D-interacting substrate of 220 kDa
                     isoform X1"
                     /calculated_mol_wt=194222
     Region          18..307
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          38..68
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(39,43..44,47..49,51..52,56,59,68,70,72,76..77,
                     80..82,84..85,89,92,101,103,105,109..110,113..115,
                     117..118,122,125)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          70..101
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          103..132
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          170..198
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          236..267
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          269..299
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          274..366
                     /region_name="Ank_2"
                     /note="Ankyrin repeats (3 copies); pfam12796"
                     /db_xref="CDD:463710"
     Region          302..332
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          335..366
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <349..413
                     /region_name="PHA02736"
                     /note="Viral ankyrin protein; Provisional"
                     /db_xref="CDD:165103"
     Region          441..954
                     /region_name="KAP_NTPase"
                     /note="KAP family P-loop domain; pfam07693"
                     /db_xref="CDD:462231"
     CDS             1..1752
                     /gene="KIDINS220"
                     /coded_by="XM_061154780.1:191..5449"
                     /db_xref="GeneID:133064533"
ORIGIN      
        1 msvlisqsvi nyveeenipa lkallekckd vdernecgqt plmiaaeqgn leivkelikn
       61 gancnledld nwtalisask eghlhiveel lkcganlehr dmggwtalmw acykgrtevv
      121 elllshganp svtglqysvy piiwaagrgh adivqlllqn gakvncsdky gttplvwaar
      181 kghlecvkhl lamgadvdqe gansmtaliv avkggytqsv keilkrnpnv nltdkdgnta
      241 lmiaskeght eivqdlldag tyvnipdrsg dtvligavrg ghveivrall qkyadidirg
      301 qdnktalywa vekgnatmvr dilqcnpdte ictkdgetpl ikatkmrnie vvellldkga
      361 kvsaidkkgd tplhiairgr srklaelllr npkdgrllyr pnkagetpyn idcshqksil
      421 tqifgarhls ptetdgdmlg ydlyssalad ilseptmqpp icvglyaqwg sgksfllkkl
      481 edemktfagq qieplfqfsw lvvfltlllc gglgllfaft vdpnlgiavs lsflavlyif
      541 fiviyfggrr egeswnwawv lstrlarhig ylelllklmf vnppelpeqt tkalpvrflf
      601 tdynrlssvg getsmaemia tlsdaceref gflatrlfrv fktedtqgkk kwkktcclps
      661 fviflfifgc iiagitllai frvdpkhmtv navlisiasi vglafvlncr twwqvldsll
      721 nsqrkrlhha asklhklkse gfmkvlkcev elmarmakti dsftqnqtrl vviidgldac
      781 eqdkvlqmld tvrvlfskgp fiaifasdph iiikainqnl nsvlrdsnin ghdymrnivh
      841 lpvflnsrgl ssarkflvts ttngdvpcsd nagmqedadr rvsqnslgem tklgsktaln
      901 rrdtyrrrqm qrtitrqmsf dltkllvted wfsdispqtm rrllnivsvt grllranqis
      961 fnwdrlaswi nlteqwpyrt swlilyleet egipdqmtlk tiyeriskni pttkdvepll
     1021 eidgdirnfe vflssrtpvl vardvktflp ctvnldpklr eiiadvraar dqinigglay
     1081 pplplheppp rppsgysqpa svcssstsfn gpfgggvvsp qphssyysgm tgpqhpfynr
     1141 pffapylytp rycpggshhl isrpsvktnl prdqsnglgs gpasgtvpln smnvdavcek
     1201 lkqiegldqs mlpqycatik kaningrvla qcnidelkke mnmnfgdwhl frstilemrn
     1261 aenqvvpedp rllsensssv phgeparrsa hselphtels sqapytlnfs feelntlgld
     1321 egaprhsnls wqsqtrrtps lssltsqdss ieiskltdkv qaeyrdayre yiaqmsqleg
     1381 gtgsttmsgr ssphstyymg qsssggsihs slepekgkds epkqddtrks flmkrgdvid
     1441 ysssgvstnd aspldpitee deksdqsgsk llpgkksser sslfqtdlkl kggglryqkl
     1501 psdedesgte esdntpllkd dkdkkaegka eralkspehs aepirtfika keylsdalld
     1561 kkdssdsgvr snesspnhsl hneaaddsql ekanlieled dphsgrrgvp hslsglpdpl
     1621 varmsicsed kkspsecsli asspeenwpa chkaynlnrt pstvtlnnns apanranqns
     1681 deteglremp qvllrsgsss hstalqnenl ksmahkrgqr ssytrlskds selhavassd
     1741 stgfgeeres il
//
LOCUS       XP_061010764            1751 aa            linear   MAM 02-DEC-2023
DEFINITION  kinase D-interacting substrate of 220 kDa isoform X2 [Dama dama].
ACCESSION   XP_061010764
VERSION     XP_061010764.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154781.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1751
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1751
                     /product="kinase D-interacting substrate of 220 kDa
                     isoform X2"
                     /calculated_mol_wt=194093
     Region          18..306
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          38..68
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(39,43..44,47..49,51..52,56,59,68,70,72,76..77,
                     80..82,84..85,89,92,101,103,105,109..110,113..115,
                     117..118,122,125)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          70..101
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          103..132
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          169..197
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          235..266
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          268..298
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          273..365
                     /region_name="Ank_2"
                     /note="Ankyrin repeats (3 copies); pfam12796"
                     /db_xref="CDD:463710"
     Region          301..331
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          334..365
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <348..412
                     /region_name="PHA02736"
                     /note="Viral ankyrin protein; Provisional"
                     /db_xref="CDD:165103"
     Region          440..953
                     /region_name="KAP_NTPase"
                     /note="KAP family P-loop domain; pfam07693"
                     /db_xref="CDD:462231"
     CDS             1..1751
                     /gene="KIDINS220"
                     /coded_by="XM_061154781.1:415..5670"
                     /db_xref="GeneID:133064533"
ORIGIN      
        1 msvlisqsvi nyveeenipa lkallekckd vdernecgqt plmiaaeqgn leivkelikn
       61 gancnledld nwtalisask eghlhiveel lkcganlehr dmggwtalmw acykgrtevv
      121 elllshganp svtglysvyp iiwaagrgha divqlllqng akvncsdkyg ttplvwaark
      181 ghlecvkhll amgadvdqeg ansmtaliva vkggytqsvk eilkrnpnvn ltdkdgntal
      241 miaskeghte ivqdlldagt yvnipdrsgd tvligavrgg hveivrallq kyadidirgq
      301 dnktalywav ekgnatmvrd ilqcnpdtei ctkdgetpli katkmrniev vellldkgak
      361 vsaidkkgdt plhiairgrs rklaelllrn pkdgrllyrp nkagetpyni dcshqksilt
      421 qifgarhlsp tetdgdmlgy dlyssaladi lseptmqppi cvglyaqwgs gksfllkkle
      481 demktfagqq ieplfqfswl vvfltlllcg glgllfaftv dpnlgiavsl sflavlyiff
      541 iviyfggrre geswnwawvl strlarhigy lelllklmfv nppelpeqtt kalpvrflft
      601 dynrlssvgg etsmaemiat lsdacerefg flatrlfrvf ktedtqgkkk wkktcclpsf
      661 viflfifgci iagitllaif rvdpkhmtvn avlisiasiv glafvlncrt wwqvldslln
      721 sqrkrlhhaa sklhklkseg fmkvlkceve lmarmaktid sftqnqtrlv viidgldace
      781 qdkvlqmldt vrvlfskgpf iaifasdphi iikainqnln svlrdsning hdymrnivhl
      841 pvflnsrgls sarkflvtst tngdvpcsdn agmqedadrr vsqnslgemt klgsktalnr
      901 rdtyrrrqmq rtitrqmsfd ltkllvtedw fsdispqtmr rllnivsvtg rllranqisf
      961 nwdrlaswin lteqwpyrts wlilyleete gipdqmtlkt iyerisknip ttkdveplle
     1021 idgdirnfev flssrtpvlv ardvktflpc tvnldpklre iiadvraard qinigglayp
     1081 plplhepppr ppsgysqpas vcssstsfng pfgggvvspq phssyysgmt gpqhpfynrp
     1141 ffapylytpr ycpggshhli srpsvktnlp rdqsnglgsg pasgtvplns mnvdavcekl
     1201 kqiegldqsm lpqycatikk aningrvlaq cnidelkkem nmnfgdwhlf rstilemrna
     1261 enqvvpedpr llsensssvp hgeparrsah selphtelss qapytlnfsf eelntlglde
     1321 gaprhsnlsw qsqtrrtpsl ssltsqdssi eiskltdkvq aeyrdayrey iaqmsqlegg
     1381 tgsttmsgrs sphstyymgq sssggsihss lepekgkdse pkqddtrksf lmkrgdvidy
     1441 sssgvstnda spldpiteed eksdqsgskl lpgkkssers slfqtdlklk ggglryqklp
     1501 sdedesgtee sdntpllkdd kdkkaegkae ralkspehsa epirtfikak eylsdalldk
     1561 kdssdsgvrs nesspnhslh neaaddsqle kanlieledd phsgrrgvph slsglpdplv
     1621 armsicsedk kspsecslia sspeenwpac hkaynlnrtp stvtlnnnsa panranqnsd
     1681 eteglrempq vllrsgsssh stalqnenlk smahkrgqrs sytrlskdss elhavassds
     1741 tgfgeeresi l
//
LOCUS       XP_061010765            1714 aa            linear   MAM 02-DEC-2023
DEFINITION  kinase D-interacting substrate of 220 kDa isoform X3 [Dama dama].
ACCESSION   XP_061010765
VERSION     XP_061010765.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154782.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1714
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1714
                     /product="kinase D-interacting substrate of 220 kDa
                     isoform X3"
                     /calculated_mol_wt=189952
     Region          18..307
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          38..68
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(39,43..44,47..49,51..52,56,59,68,70,72,76..77,
                     80..82,84..85,89,92,101,103,105,109..110,113..115,
                     117..118,122,125)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          70..101
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          103..132
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          170..198
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          236..267
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          269..299
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          274..366
                     /region_name="Ank_2"
                     /note="Ankyrin repeats (3 copies); pfam12796"
                     /db_xref="CDD:463710"
     Region          302..332
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          335..366
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <349..413
                     /region_name="PHA02736"
                     /note="Viral ankyrin protein; Provisional"
                     /db_xref="CDD:165103"
     Region          441..954
                     /region_name="KAP_NTPase"
                     /note="KAP family P-loop domain; pfam07693"
                     /db_xref="CDD:462231"
     CDS             1..1714
                     /gene="KIDINS220"
                     /coded_by="XM_061154782.1:416..5560"
                     /db_xref="GeneID:133064533"
ORIGIN      
        1 msvlisqsvi nyveeenipa lkallekckd vdernecgqt plmiaaeqgn leivkelikn
       61 gancnledld nwtalisask eghlhiveel lkcganlehr dmggwtalmw acykgrtevv
      121 elllshganp svtglqysvy piiwaagrgh adivqlllqn gakvncsdky gttplvwaar
      181 kghlecvkhl lamgadvdqe gansmtaliv avkggytqsv keilkrnpnv nltdkdgnta
      241 lmiaskeght eivqdlldag tyvnipdrsg dtvligavrg ghveivrall qkyadidirg
      301 qdnktalywa vekgnatmvr dilqcnpdte ictkdgetpl ikatkmrnie vvellldkga
      361 kvsaidkkgd tplhiairgr srklaelllr npkdgrllyr pnkagetpyn idcshqksil
      421 tqifgarhls ptetdgdmlg ydlyssalad ilseptmqpp icvglyaqwg sgksfllkkl
      481 edemktfagq qieplfqfsw lvvfltlllc gglgllfaft vdpnlgiavs lsflavlyif
      541 fiviyfggrr egeswnwawv lstrlarhig ylelllklmf vnppelpeqt tkalpvrflf
      601 tdynrlssvg getsmaemia tlsdaceref gflatrlfrv fktedtqgkk kwkktcclps
      661 fviflfifgc iiagitllai frvdpkhmtv navlisiasi vglafvlncr twwqvldsll
      721 nsqrkrlhha asklhklkse gfmkvlkcev elmarmakti dsftqnqtrl vviidgldac
      781 eqdkvlqmld tvrvlfskgp fiaifasdph iiikainqnl nsvlrdsnin ghdymrnivh
      841 lpvflnsrgl ssarkflvts ttngdvpcsd nagmqedadr rvsqnslgem tklgsktaln
      901 rrdtyrrrqm qrtitrqmsf dltkllvted wfsdispqtm rrllnivsvt grllranqis
      961 fnwdrlaswi nlteqwpyrt swlilyleet egipdqmtlk tiyeriskni pttkdvepll
     1021 eidgdirnfe vflssrtpvl vardvktflp ctvnldpklr eiiadvraar dqinigglay
     1081 pplplheppp rppsgysqpa svcssstsfn gpfgggvvsp qphssyysgm tgpqhpfynr
     1141 gsgpasgtvp lnsmnvdavc eklkqiegld qsmlpqycat ikkaningrv laqcnidelk
     1201 kemnmnfgdw hlfrstilem rnaenqvvpe dprllsenss svphgeparr sahselphte
     1261 lssqapytln fsfeelntlg ldegaprhsn lswqsqtrrt pslssltsqd ssieiskltd
     1321 kvqaeyrday reyiaqmsql eggtgsttms grssphstyy mgqsssggsi hsslepekgk
     1381 dsepkqddtr ksflmkrgdv idysssgvst ndaspldpit eedeksdqsg skllpgkkss
     1441 ersslfqtdl klkggglryq klpsdedesg teesdntpll kddkdkkaeg kaeralkspe
     1501 hsaepirtfi kakeylsdal ldkkdssdsg vrsnesspnh slhneaadds qlekanliel
     1561 eddphsgrrg vphslsglpd plvarmsics edkkspsecs liasspeenw pachkaynln
     1621 rtpstvtlnn nsapanranq nsdeteglre mpqvllrsgs sshstalqne nlksmahkrg
     1681 qrssytrlsk dsselhavas sdstgfgeer esil
//
LOCUS       XP_061010766            1713 aa            linear   MAM 02-DEC-2023
DEFINITION  kinase D-interacting substrate of 220 kDa isoform X4 [Dama dama].
ACCESSION   XP_061010766
VERSION     XP_061010766.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154783.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1713
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1713
                     /product="kinase D-interacting substrate of 220 kDa
                     isoform X4"
                     /calculated_mol_wt=189824
     Region          18..306
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          38..68
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(39,43..44,47..49,51..52,56,59,68,70,72,76..77,
                     80..82,84..85,89,92,101,103,105,109..110,113..115,
                     117..118,122,125)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          70..101
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          103..132
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          169..197
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          235..266
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          268..298
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          273..365
                     /region_name="Ank_2"
                     /note="Ankyrin repeats (3 copies); pfam12796"
                     /db_xref="CDD:463710"
     Region          301..331
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          334..365
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <348..412
                     /region_name="PHA02736"
                     /note="Viral ankyrin protein; Provisional"
                     /db_xref="CDD:165103"
     Region          440..953
                     /region_name="KAP_NTPase"
                     /note="KAP family P-loop domain; pfam07693"
                     /db_xref="CDD:462231"
     CDS             1..1713
                     /gene="KIDINS220"
                     /coded_by="XM_061154783.1:415..5556"
                     /db_xref="GeneID:133064533"
ORIGIN      
        1 msvlisqsvi nyveeenipa lkallekckd vdernecgqt plmiaaeqgn leivkelikn
       61 gancnledld nwtalisask eghlhiveel lkcganlehr dmggwtalmw acykgrtevv
      121 elllshganp svtglysvyp iiwaagrgha divqlllqng akvncsdkyg ttplvwaark
      181 ghlecvkhll amgadvdqeg ansmtaliva vkggytqsvk eilkrnpnvn ltdkdgntal
      241 miaskeghte ivqdlldagt yvnipdrsgd tvligavrgg hveivrallq kyadidirgq
      301 dnktalywav ekgnatmvrd ilqcnpdtei ctkdgetpli katkmrniev vellldkgak
      361 vsaidkkgdt plhiairgrs rklaelllrn pkdgrllyrp nkagetpyni dcshqksilt
      421 qifgarhlsp tetdgdmlgy dlyssaladi lseptmqppi cvglyaqwgs gksfllkkle
      481 demktfagqq ieplfqfswl vvfltlllcg glgllfaftv dpnlgiavsl sflavlyiff
      541 iviyfggrre geswnwawvl strlarhigy lelllklmfv nppelpeqtt kalpvrflft
      601 dynrlssvgg etsmaemiat lsdacerefg flatrlfrvf ktedtqgkkk wkktcclpsf
      661 viflfifgci iagitllaif rvdpkhmtvn avlisiasiv glafvlncrt wwqvldslln
      721 sqrkrlhhaa sklhklkseg fmkvlkceve lmarmaktid sftqnqtrlv viidgldace
      781 qdkvlqmldt vrvlfskgpf iaifasdphi iikainqnln svlrdsning hdymrnivhl
      841 pvflnsrgls sarkflvtst tngdvpcsdn agmqedadrr vsqnslgemt klgsktalnr
      901 rdtyrrrqmq rtitrqmsfd ltkllvtedw fsdispqtmr rllnivsvtg rllranqisf
      961 nwdrlaswin lteqwpyrts wlilyleete gipdqmtlkt iyerisknip ttkdveplle
     1021 idgdirnfev flssrtpvlv ardvktflpc tvnldpklre iiadvraard qinigglayp
     1081 plplhepppr ppsgysqpas vcssstsfng pfgggvvspq phssyysgmt gpqhpfynrg
     1141 sgpasgtvpl nsmnvdavce klkqiegldq smlpqycati kkaningrvl aqcnidelkk
     1201 emnmnfgdwh lfrstilemr naenqvvped prllsensss vphgeparrs ahselphtel
     1261 ssqapytlnf sfeelntlgl degaprhsnl swqsqtrrtp slssltsqds sieiskltdk
     1321 vqaeyrdayr eyiaqmsqle ggtgsttmsg rssphstyym gqsssggsih sslepekgkd
     1381 sepkqddtrk sflmkrgdvi dysssgvstn daspldpite edeksdqsgs kllpgkksse
     1441 rsslfqtdlk lkggglryqk lpsdedesgt eesdntpllk ddkdkkaegk aeralkspeh
     1501 saepirtfik akeylsdall dkkdssdsgv rsnesspnhs lhneaaddsq lekanliele
     1561 ddphsgrrgv phslsglpdp lvarmsicse dkkspsecsl iasspeenwp achkaynlnr
     1621 tpstvtlnnn sapanranqn sdeteglrem pqvllrsgss shstalqnen lksmahkrgq
     1681 rssytrlskd sselhavass dstgfgeere sil
//
LOCUS       XP_061010767            1344 aa            linear   MAM 02-DEC-2023
DEFINITION  kinase D-interacting substrate of 220 kDa isoform X5 [Dama dama].
ACCESSION   XP_061010767
VERSION     XP_061010767.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154784.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1344
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1344
                     /product="kinase D-interacting substrate of 220 kDa
                     isoform X5"
                     /calculated_mol_wt=149825
     Region          18..307
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          38..68
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(39,43..44,47..49,51..52,56,59,68,70,72,76..77,
                     80..82,84..85,89,92,101,103,105,109..110,113..115,
                     117..118,122,125)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          70..101
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          103..132
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          170..198
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          236..267
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          269..299
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          274..366
                     /region_name="Ank_2"
                     /note="Ankyrin repeats (3 copies); pfam12796"
                     /db_xref="CDD:463710"
     Region          302..332
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          335..366
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <349..413
                     /region_name="PHA02736"
                     /note="Viral ankyrin protein; Provisional"
                     /db_xref="CDD:165103"
     Region          441..954
                     /region_name="KAP_NTPase"
                     /note="KAP family P-loop domain; pfam07693"
                     /db_xref="CDD:462231"
     CDS             1..1344
                     /gene="KIDINS220"
                     /coded_by="XM_061154784.1:416..4450"
                     /db_xref="GeneID:133064533"
ORIGIN      
        1 msvlisqsvi nyveeenipa lkallekckd vdernecgqt plmiaaeqgn leivkelikn
       61 gancnledld nwtalisask eghlhiveel lkcganlehr dmggwtalmw acykgrtevv
      121 elllshganp svtglqysvy piiwaagrgh adivqlllqn gakvncsdky gttplvwaar
      181 kghlecvkhl lamgadvdqe gansmtaliv avkggytqsv keilkrnpnv nltdkdgnta
      241 lmiaskeght eivqdlldag tyvnipdrsg dtvligavrg ghveivrall qkyadidirg
      301 qdnktalywa vekgnatmvr dilqcnpdte ictkdgetpl ikatkmrnie vvellldkga
      361 kvsaidkkgd tplhiairgr srklaelllr npkdgrllyr pnkagetpyn idcshqksil
      421 tqifgarhls ptetdgdmlg ydlyssalad ilseptmqpp icvglyaqwg sgksfllkkl
      481 edemktfagq qieplfqfsw lvvfltlllc gglgllfaft vdpnlgiavs lsflavlyif
      541 fiviyfggrr egeswnwawv lstrlarhig ylelllklmf vnppelpeqt tkalpvrflf
      601 tdynrlssvg getsmaemia tlsdaceref gflatrlfrv fktedtqgkk kwkktcclps
      661 fviflfifgc iiagitllai frvdpkhmtv navlisiasi vglafvlncr twwqvldsll
      721 nsqrkrlhha asklhklkse gfmkvlkcev elmarmakti dsftqnqtrl vviidgldac
      781 eqdkvlqmld tvrvlfskgp fiaifasdph iiikainqnl nsvlrdsnin ghdymrnivh
      841 lpvflnsrgl ssarkflvts ttngdvpcsd nagmqedadr rvsqnslgem tklgsktaln
      901 rrdtyrrrqm qrtitrqmsf dltkllvted wfsdispqtm rrllnivsvt grllranqis
      961 fnwdrlaswi nlteqwpyrt swlilyleet egipdqmtlk tiyeriskni pttkdvepll
     1021 eidgdirnfe vflssrtpvl vardvktflp ctvnldpklr eiiadvraar dqinigglay
     1081 pplplheppp rppsgysqpa svcssstsfn gpfgggvvsp qphssyysgm tgpqhpfynr
     1141 pffapylytp rycpggshhl isrpsvktnl prdqsnglgs gpasgtvpln smnvdavcek
     1201 lkqiegldqs mlpqycatik kaningrvla qcnidelkke mnmnfgdwhl frstilemrn
     1261 aenqvvpedp rllsensssv phgeparrsa hselphtels sqapytlnfs feelntlgld
     1321 egaprhsnls wqklhvvqve kgsf
//
LOCUS       XP_061010768             526 aa            linear   MAM 02-DEC-2023
DEFINITION  lysophospholipid acyltransferase 2 isoform X1 [Dama dama].
ACCESSION   XP_061010768
VERSION     XP_061010768.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154785.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..526
                     /product="lysophospholipid acyltransferase 2 isoform X1"
                     /calculated_mol_wt=60002
     Region          18..459
                     /region_name="MBOAT"
                     /note="membrane-bound O-acyltransferase family; cl00738"
                     /db_xref="CDD:445070"
     CDS             1..526
                     /gene="MBOAT2"
                     /coded_by="XM_061154785.1:87..1667"
                     /db_xref="GeneID:133064534"
ORIGIN      
        1 mattstastt sttgstllqp lsnavrlpid qvnfvvcqlf allaaiwfrt ylhssktssf
       61 irhvvatllg lylalfcfgw yalhflvqsg isycimviig venmhkycfl falgyltvcq
      121 itrvyifdyg qysadfsgpm miitqkitsl ayeihdgmfr kdeeltpsqr glavrrmpsl
      181 leylsyncnf mgilagplcs ykdyitfieg rsyhmtqsge ngkeeiqyer tepspnvavi
      241 qkllicglsl lfhltiskml pveynidehf qataswptkv vylyvsllaa rpkyyfawtl
      301 adainnaagf gfrgydknga ahwdlisnlr ikqiemstsf kmfldnwniq talwlkrvcy
      361 eraslspttq tfflsaiwhg vypgyyltfl tgvlmtlvar avrnnfrhyf ieppqlkfly
      421 dvitwiatqi aisytvvpfv llsvkpslmf ysswyyslhf agilvllllp vkkkqkgkst
      481 henvqlsrsk kfderenslg qnsifttnnv cnqnqeiasr hsslkq
//
LOCUS       XP_061010769             387 aa            linear   MAM 02-DEC-2023
DEFINITION  lysophospholipid acyltransferase 2 isoform X2 [Dama dama].
ACCESSION   XP_061010769
VERSION     XP_061010769.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154786.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..387
                     /product="lysophospholipid acyltransferase 2 isoform X2"
                     /calculated_mol_wt=44496
     Region          <1..320
                     /region_name="MBOAT"
                     /note="membrane-bound O-acyltransferase family; cl00738"
                     /db_xref="CDD:445070"
     CDS             1..387
                     /gene="MBOAT2"
                     /coded_by="XM_061154786.1:285..1448"
                     /db_xref="GeneID:133064534"
ORIGIN      
        1 mmiitqkits layeihdgmf rkdeeltpsq rglavrrmps lleylsyncn fmgilagplc
       61 sykdyitfie grsyhmtqsg engkeeiqye rtepspnvav iqkllicgls llfhltiskm
      121 lpveynideh fqataswptk vvylyvslla arpkyyfawt ladainnaag fgfrgydkng
      181 aahwdlisnl rikqiemsts fkmfldnwni qtalwlkrvc yeraslsptt qtfflsaiwh
      241 gvypgyyltf ltgvlmtlva ravrnnfrhy fieppqlkfl ydvitwiatq iaisytvvpf
      301 vllsvkpslm fysswyyslh fagilvllll pvkkkqkgks thenvqlsrs kkfderensl
      361 gqnsifttnn vcnqnqeias rhsslkq
//
LOCUS       XP_061010770            1008 aa            linear   MAM 02-DEC-2023
DEFINITION  arf-GAP with SH3 domain, ANK repeat and PH domain-containing
            protein 2 isoform X1 [Dama dama].
ACCESSION   XP_061010770
VERSION     XP_061010770.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154787.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1008
                     /product="arf-GAP with SH3 domain, ANK repeat and PH
                     domain-containing protein 2 isoform X1"
                     /calculated_mol_wt=111324
     Region          34..248
                     /region_name="BAR_ASAP2"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of ArfGAP with
                     SH3 domain, ANK repeat and PH domain containing protein 2;
                     cd07642"
                     /db_xref="CDD:153326"
     Site            order(43,46..47,51,53..54,57..58,60..61,71..72,74..75,
                     78..79,81..82,85,101,104..105,206,209..210,212,214,
                     217..218,220..221,227..228,231..232,234..235,238..239,
                     241..242)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153326"
     Region          297..403
                     /region_name="PH_ASAP"
                     /note="ArfGAP with SH3 domain, ankyrin repeat and PH
                     domain Pleckstrin homology (PH) domain; cd13251"
                     /db_xref="CDD:270071"
     Region          419..541
                     /region_name="ArfGap_ASAP2"
                     /note="ArfGAP domain of ASAP2 (ArfGAP2 with SH3 domain,
                     ANK repeat and PH domain-containing protein 2); cd08849"
                     /db_xref="CDD:350074"
     Site            order(422..423,426,449..451,472,480..484,486..488,
                     490..492,496..497,500..501,533,536..537)
                     /site_type="other"
                     /note="ANK repeat binding site [polypeptide binding]"
                     /db_xref="CDD:350074"
     Site            order(436,439,456,459,522)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:350074"
     Site            order(436,439,456,459,464)
                     /site_type="other"
                     /note="arginine finger"
                     /db_xref="CDD:350074"
     Site            order(461,464..465)
                     /site_type="other"
                     /note="GTP binding site [chemical binding]"
                     /db_xref="CDD:350074"
     Region          550..582
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(551..552,555..557,559..560,564,567,582,584,586,
                     590..591,594,598..599,601..602,606,609,618,620,622,
                     626..627,630..632,634..635,639,642,651)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          <562..677
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          584..618
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          620..651
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <723..>936
                     /region_name="PRK07003"
                     /note="DNA polymerase III subunit gamma/tau"
                     /db_xref="CDD:235906"
     Region          950..1005
                     /region_name="SH3_ASAP2"
                     /note="Src homology 3 domain of ArfGAP with SH3 domain,
                     ankyrin repeat and PH domain containing protein 2;
                     cd11966"
                     /db_xref="CDD:212899"
     Site            order(955,957,960,964,982..983,999,1001..1002)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212899"
     CDS             1..1008
                     /gene="ASAP2"
                     /coded_by="XM_061154787.1:42..3068"
                     /db_xref="GeneID:133064535"
ORIGIN      
        1 mpdqisvsef vaethedyka ptassfttrt aqcrntvaai eealdvdrmv lykmkksvka
       61 inisglahve neeqytqale kfggncvcrd dpdlgsaflk fsvftkelta lfknliqnmn
      121 niisfpldsl lkgdlkgvkg dlkkpfdkaw kdyetkitki ekekkehakl hgmirteisg
      181 aeiaeemeke rryfqlqmce yllkvneiki kkgvdllqnl ikyfhaqcnf fqdglkaves
      241 lkpsietlst dlhtikqaqd eerrqliqlr dilksalqve qkedlqmrqs tayslhqpqg
      301 nkehgtertg nlykksdgir kvwqkrkcsv kngfltishg tanrppakln lltcqvktnp
      361 eekkcfdlis hdrtyhfqae deqecqiwms vlqnskeeal nnafkgddnt gennivqelt
      421 keiisevqgm tgndvccdcg apdptwlstn lgvltciecs gihrelgvhy srmqsltldv
      481 lgtselllak nignagfnei mecclpaeds vkpnpgsdmn arkdyitaky ierkyarkkh
      541 adnaaklhsl ceavktrdif gllqayadgv dltekiplan ghepdetalh lavrsvdrts
      601 lhivdflvqn sgnldkqtgk gstalhyccl tdsaeclkll lrgkasigia nesgetpldi
      661 akrlrherce ellnqalsgr fnshvhveye wrllhedlde sdddmdeklq pspsrredrp
      721 vsfyqlgpsq lpssaaalar dagglakdkq rgfvpsllqn etygailsgs ppptqpaapg
      781 sasapplppr nvakaqpass anapwktnsv svdsisrqrs ssdppavhpp lpplrvtstn
      841 plaptppppv aktpsvieal sqqskpaqpg lppskapppl ppqppsrlpq krpapgpdks
      901 splinkgqpr gpavdlsgte algplsnamv mqppapmprk sqttklkpkr vkalyncvad
      961 npdeltfseg dviivdgeed qewwighidg dpsrkgafpv sfvhfiad
//
LOCUS       XP_061010771             963 aa            linear   MAM 02-DEC-2023
DEFINITION  arf-GAP with SH3 domain, ANK repeat and PH domain-containing
            protein 2 isoform X2 [Dama dama].
ACCESSION   XP_061010771
VERSION     XP_061010771.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154788.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..963
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..963
                     /product="arf-GAP with SH3 domain, ANK repeat and PH
                     domain-containing protein 2 isoform X2"
                     /calculated_mol_wt=106648
     Region          34..248
                     /region_name="BAR_ASAP2"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of ArfGAP with
                     SH3 domain, ANK repeat and PH domain containing protein 2;
                     cd07642"
                     /db_xref="CDD:153326"
     Site            order(43,46..47,51,53..54,57..58,60..61,71..72,74..75,
                     78..79,81..82,85,101,104..105,206,209..210,212,214,
                     217..218,220..221,227..228,231..232,234..235,238..239,
                     241..242)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153326"
     Region          297..403
                     /region_name="PH_ASAP"
                     /note="ArfGAP with SH3 domain, ankyrin repeat and PH
                     domain Pleckstrin homology (PH) domain; cd13251"
                     /db_xref="CDD:270071"
     Region          419..541
                     /region_name="ArfGap_ASAP2"
                     /note="ArfGAP domain of ASAP2 (ArfGAP2 with SH3 domain,
                     ANK repeat and PH domain-containing protein 2); cd08849"
                     /db_xref="CDD:350074"
     Site            order(422..423,426,449..451,472,480..484,486..488,
                     490..492,496..497,500..501,533,536..537)
                     /site_type="other"
                     /note="ANK repeat binding site [polypeptide binding]"
                     /db_xref="CDD:350074"
     Site            order(436,439,456,459,522)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:350074"
     Site            order(436,439,456,459,464)
                     /site_type="other"
                     /note="arginine finger"
                     /db_xref="CDD:350074"
     Site            order(461,464..465)
                     /site_type="other"
                     /note="GTP binding site [chemical binding]"
                     /db_xref="CDD:350074"
     Region          550..582
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(551..552,555..557,559..560,564,567,582,584,586,
                     590..591,594,598..599,601..602,606,609,618,620,622,
                     626..627,630..632,634..635,639,642,651)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          <562..677
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          584..618
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          620..651
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          732..>825
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          905..960
                     /region_name="SH3_ASAP2"
                     /note="Src homology 3 domain of ArfGAP with SH3 domain,
                     ankyrin repeat and PH domain containing protein 2;
                     cd11966"
                     /db_xref="CDD:212899"
     Site            order(910,912,915,919,937..938,954,956..957)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212899"
     CDS             1..963
                     /gene="ASAP2"
                     /coded_by="XM_061154788.1:42..2933"
                     /db_xref="GeneID:133064535"
ORIGIN      
        1 mpdqisvsef vaethedyka ptassfttrt aqcrntvaai eealdvdrmv lykmkksvka
       61 inisglahve neeqytqale kfggncvcrd dpdlgsaflk fsvftkelta lfknliqnmn
      121 niisfpldsl lkgdlkgvkg dlkkpfdkaw kdyetkitki ekekkehakl hgmirteisg
      181 aeiaeemeke rryfqlqmce yllkvneiki kkgvdllqnl ikyfhaqcnf fqdglkaves
      241 lkpsietlst dlhtikqaqd eerrqliqlr dilksalqve qkedlqmrqs tayslhqpqg
      301 nkehgtertg nlykksdgir kvwqkrkcsv kngfltishg tanrppakln lltcqvktnp
      361 eekkcfdlis hdrtyhfqae deqecqiwms vlqnskeeal nnafkgddnt gennivqelt
      421 keiisevqgm tgndvccdcg apdptwlstn lgvltciecs gihrelgvhy srmqsltldv
      481 lgtselllak nignagfnei mecclpaeds vkpnpgsdmn arkdyitaky ierkyarkkh
      541 adnaaklhsl ceavktrdif gllqayadgv dltekiplan ghepdetalh lavrsvdrts
      601 lhivdflvqn sgnldkqtgk gstalhyccl tdsaeclkll lrgkasigia nesgetpldi
      661 akrlrherce ellnqalsgr fnshvhveye wrllhedlde sdddmdeklq pspsrredrp
      721 vsfyqlgpsq lpssaaalar dagglakdkq rgfvpsllqn etygailsgs ppptqpaapg
      781 sasapplppr nvakdplapt ppppvaktps viealsqqsk paqpglppsk appplppqpp
      841 srlpqkrpap gpdkssplin kgqprgpavd lsgtealgpl snamvmqppa pmprksqttk
      901 lkpkrvkaly ncvadnpdel tfsegdviiv dgeedqewwi ghidgdpsrk gafpvsfvhf
      961 iad
//
LOCUS       XP_061010772             684 aa            linear   MAM 02-DEC-2023
DEFINITION  cleavage and polyadenylation specificity factor subunit 3 isoform
            X1 [Dama dama].
ACCESSION   XP_061010772
VERSION     XP_061010772.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154789.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..684
                     /product="cleavage and polyadenylation specificity factor
                     subunit 3 isoform X1"
                     /calculated_mol_wt=77371
     Region          12..205
                     /region_name="CPSF3-like_MBL-fold"
                     /note="cleavage and polyadenylation specificity factor
                     (CPSF) subunit 3 and related proteins; MBL-fold
                     metallo-hydrolase domain; cd16292"
                     /db_xref="CDD:293850"
     Region          14..421
                     /region_name="YSH1"
                     /note="RNA processing exonuclease, beta-lactamase fold,
                     Cft2 family [Translation, ribosomal structure and
                     biogenesis]; COG1236"
                     /db_xref="CDD:440849"
     Site            order(71,73,75..76,158,179)
                     /site_type="active"
                     /db_xref="CDD:293850"
     Region          479..682
                     /region_name="CPSF73-100_C"
                     /note="Pre-mRNA 3'-end-processing endonuclease
                     polyadenylation factor C-term; pfam11718"
                     /db_xref="CDD:463330"
     CDS             1..684
                     /gene="CPSF3"
                     /coded_by="XM_061154789.1:146..2200"
                     /db_xref="GeneID:133064536"
ORIGIN      
        1 msaipaeesd qllirplgag qevgrsciil efkgrkimld cgihpglegm dalpyidlid
       61 paeidlllis hfhldhcgal pwflqktsfk grtfmthatk aiyrwllsdy vkvsnisadd
      121 mlytetdlee smdkietinf hevkevagik fwcyhaghvl gaamfmieia gvkllytgdf
      181 srqedrhlma aeipnikpdi liiestygth ihekreerea rfcntvhdiv nrggrglipv
      241 falgraqell lildeywqnh pelhdipiyy asslakkcma vyqtyvnamn dkirkqinin
      301 npfvfkhisn lksmdhfddi gpsvvmaspg mmqsglsrel feswctdkrn gviiagycve
      361 gtlakhimse peeittmsgq klplkmsvdy isfsahtdyq qtsefiralk pphvilvhge
      421 qnemarlkaa lireyednde vhievhnprn teavtlnfrg eklakvmgfl adkkpeqgqr
      481 vsgilvkrnf nyhilspcdl snytdlamst vkqtqaipyt gpfnllyyql qkltgdveel
      541 eiqekpalkv fknitviqep gmvilewlan psndmyadtv ttvilevqsn pkirkgavqk
      601 vskklemhvy skrleimlqd ifgedcvsvk dgsilsvtvd gktaninlet rtveceegse
      661 ddeslremve laaqrlyeal tpvh
//
LOCUS       XP_061010773             590 aa            linear   MAM 02-DEC-2023
DEFINITION  cleavage and polyadenylation specificity factor subunit 3 isoform
            X2 [Dama dama].
ACCESSION   XP_061010773
VERSION     XP_061010773.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154790.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..590
                     /product="cleavage and polyadenylation specificity factor
                     subunit 3 isoform X2"
                     /calculated_mol_wt=66957
     Region          1..362
                     /region_name="COG1782"
                     /note="Predicted metal-dependent RNase, contains
                     metallo-beta-lactamase and KH domains [General function
                     prediction only]"
                     /db_xref="CDD:441388"
     Region          385..588
                     /region_name="CPSF73-100_C"
                     /note="Pre-mRNA 3'-end-processing endonuclease
                     polyadenylation factor C-term; pfam11718"
                     /db_xref="CDD:463330"
     CDS             1..590
                     /gene="CPSF3"
                     /coded_by="XM_061154790.1:165..1937"
                     /db_xref="GeneID:133064536"
ORIGIN      
        1 mthatkaiyr wllsdyvkvs nisaddmlyt etdleesmdk ietinfhevk evagikfwcy
       61 haghvlgaam fmieiagvkl lytgdfsrqe drhlmaaeip nikpdiliie stygthihek
      121 reerearfcn tvhdivnrgg rglipvfalg raqelllild eywqnhpelh dipiyyassl
      181 akkcmavyqt yvnamndkir kqininnpfv fkhisnlksm dhfddigpsv vmaspgmmqs
      241 glsrelfesw ctdkrngvii agycvegtla khimsepeei ttmsgqklpl kmsvdyisfs
      301 ahtdyqqtse firalkpphv ilvhgeqnem arlkaalire yedndevhie vhnprnteav
      361 tlnfrgekla kvmgfladkk peqgqrvsgi lvkrnfnyhi lspcdlsnyt dlamstvkqt
      421 qaipytgpfn llyyqlqklt gdveeleiqe kpalkvfkni tviqepgmvi lewlanpsnd
      481 myadtvttvi levqsnpkir kgavqkvskk lemhvyskrl eimlqdifge dcvsvkdgsi
      541 lsvtvdgkta ninletrtve ceegseddes lremvelaaq rlyealtpvh
//
LOCUS       XP_061010774             200 aa            linear   MAM 02-DEC-2023
DEFINITION  integrin beta-1-binding protein 1 [Dama dama].
ACCESSION   XP_061010774
VERSION     XP_061010774.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154791.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..200
                     /product="integrin beta-1-binding protein 1"
                     /calculated_mol_wt=21696
     Region          1..200
                     /region_name="ICAP-1_inte_bdg"
                     /note="Beta-1 integrin binding protein; pfam10480"
                     /db_xref="CDD:119000"
     Site            order(66,153,173)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269985"
     Site            order(139..144,160,184,188)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269985"
     CDS             1..200
                     /gene="ITGB1BP1"
                     /coded_by="XM_061154791.1:273..875"
                     /db_xref="GeneID:133064537"
ORIGIN      
        1 mfrkgkkrhs ssssqsseis tksksvdssl gglsrsstva sldtdstkss gqsnnnsdtc
       61 aefrikyvga ieklkisegk slegpldlin yidvaqqdgk lpfvpleeef imgvskygik
      121 vstsdqydvl hrhalyliir mvcyddglga gksllalktt dasnqeyslw vyqcnsleqa
      181 qaickvlsta fdsvltsekp
//
LOCUS       XP_061010775             200 aa            linear   MAM 02-DEC-2023
DEFINITION  integrin beta-1-binding protein 1 [Dama dama].
ACCESSION   XP_061010775
VERSION     XP_061010775.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154792.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..200
                     /product="integrin beta-1-binding protein 1"
                     /calculated_mol_wt=21696
     Region          1..200
                     /region_name="ICAP-1_inte_bdg"
                     /note="Beta-1 integrin binding protein; pfam10480"
                     /db_xref="CDD:119000"
     Site            order(66,153,173)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269985"
     Site            order(139..144,160,184,188)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269985"
     CDS             1..200
                     /gene="ITGB1BP1"
                     /coded_by="XM_061154792.1:142..744"
                     /db_xref="GeneID:133064537"
ORIGIN      
        1 mfrkgkkrhs ssssqsseis tksksvdssl gglsrsstva sldtdstkss gqsnnnsdtc
       61 aefrikyvga ieklkisegk slegpldlin yidvaqqdgk lpfvpleeef imgvskygik
      121 vstsdqydvl hrhalyliir mvcyddglga gksllalktt dasnqeyslw vyqcnsleqa
      181 qaickvlsta fdsvltsekp
//
LOCUS       XP_061010776             825 aa            linear   MAM 02-DEC-2023
DEFINITION  disintegrin and metalloproteinase domain-containing protein 17
            isoform X1 [Dama dama].
ACCESSION   XP_061010776
VERSION     XP_061010776.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154793.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..825
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..825
                     /product="disintegrin and metalloproteinase
                     domain-containing protein 17 isoform X1"
                     /calculated_mol_wt=92692
     Region          50..165
                     /region_name="Pep_M12B_propep"
                     /note="Reprolysin family propeptide; pfam01562"
                     /db_xref="CDD:460254"
     Region          221..475
                     /region_name="ZnMc_TACE_like"
                     /note="Zinc-dependent metalloprotease; TACE_like
                     subfamily. TACE, the tumor-necrosis factor-alpha
                     converting enzyme, releases soluble TNF-alpha from
                     transmembrane pro-TNF-alpha; cd04270"
                     /db_xref="CDD:239798"
     Site            order(403..404,407,413)
                     /site_type="active"
                     /db_xref="CDD:239798"
     Region          482..558
                     /region_name="DISIN"
                     /note="Homologues of snake disintegrins; smart00050"
                     /db_xref="CDD:214490"
     Region          579..640
                     /region_name="ADAM17_MPD"
                     /note="Membrane-proximal domain, switch, for ADAM17;
                     pfam16698"
                     /db_xref="CDD:465239"
     CDS             1..825
                     /gene="ADAM17"
                     /coded_by="XM_061154793.1:271..2748"
                     /db_xref="GeneID:133064538"
ORIGIN      
        1 mrhgvlllts lvhlvlaprp adergsprrl ekldsllsdy dilslsniqq hsvrkrelqa
       61 sthletlltf salkrhfkly ltssterfsk nfkvvvvdgk dereypvkwq dffsghvvge
      121 pdsrvlahig ddditirint dgaeyniepl wrlindtkdk rmlvyksedi knvsrlqspk
      181 vcgyikadne ellpkglvds elpdelvhrv krradpnplk ntckllvvad hrfykymgrg
      241 eestttnyli elidrvddiy rntswdnagf kgygiqieqi rilkspqvvk pgerhfnmak
      301 sypneekdaw dvktlleqfs fdiaeeaskv clahlftyqd fdmgtlglay vgspranshg
      361 gvcpkayysp igkkniylns gltstknygk tiltkeadlv tthelghnfg aehdpdglae
      421 capnedqggk yvmypiavsg dhennkmfsn cskqsiykti esksqecfqe rsnkvcgnsr
      481 vdegeecdpg imylnndtcc nsdctlrpgv qcsdrnspcc kncqfetaqk kcqeainatc
      541 kgvsyctgns secpppgnaa ddtvcldlgk ckdgkcvpfc ereqrlesca cnetdnsckv
      601 ccrdpsgrcl pyvdaeqknl flrkgkpctv gfcdmngkce krvqdvierf wefidklsin
      661 tfgkfladni vgsvlvfsli fwipfsilvh cvdkkldkqf eslslfhpsn vemlssmdsa
      721 svriikpfpa pqtpgrlqpt pvmppvpsap lapkldhqrm dtiqedpstd shadedgfek
      781 dpfpnssaaa ksfedltdhp vtrsekassf klqrqnrvds ketec
//
LOCUS       XP_061010777             589 aa            linear   MAM 02-DEC-2023
DEFINITION  disintegrin and metalloproteinase domain-containing protein 17
            isoform X2 [Dama dama].
ACCESSION   XP_061010777
VERSION     XP_061010777.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154794.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..589
                     /product="disintegrin and metalloproteinase
                     domain-containing protein 17 isoform X2"
                     /calculated_mol_wt=65437
     Region          1..239
                     /region_name="ZnMc_TACE_like"
                     /note="Zinc-dependent metalloprotease; TACE_like
                     subfamily. TACE, the tumor-necrosis factor-alpha
                     converting enzyme, releases soluble TNF-alpha from
                     transmembrane pro-TNF-alpha; cd04270"
                     /db_xref="CDD:239798"
     Site            order(167..168,171,177)
                     /site_type="active"
                     /db_xref="CDD:239798"
     Region          246..322
                     /region_name="DISIN"
                     /note="Homologues of snake disintegrins; smart00050"
                     /db_xref="CDD:214490"
     Region          343..404
                     /region_name="ADAM17_MPD"
                     /note="Membrane-proximal domain, switch, for ADAM17;
                     pfam16698"
                     /db_xref="CDD:465239"
     CDS             1..589
                     /gene="ADAM17"
                     /coded_by="XM_061154794.1:256..2025"
                     /db_xref="GeneID:133064538"
ORIGIN      
        1 mgrgeesttt nylielidrv ddiyrntswd nagfkgygiq ieqirilksp qvvkpgerhf
       61 nmaksypnee kdawdvktll eqfsfdiaee askvclahlf tyqdfdmgtl glayvgspra
      121 nshggvcpka yyspigkkni ylnsgltstk nygktiltke adlvtthelg hnfgaehdpd
      181 glaecapned qggkyvmypi avsgdhennk mfsncskqsi yktiesksqe cfqersnkvc
      241 gnsrvdegee cdpgimylnn dtccnsdctl rpgvqcsdrn spcckncqfe taqkkcqeai
      301 natckgvsyc tgnssecppp gnaaddtvcl dlgkckdgkc vpfcereqrl escacnetdn
      361 sckvccrdps grclpyvdae qknlflrkgk pctvgfcdmn gkcekrvqdv ierfwefidk
      421 lsintfgkfl adnivgsvlv fslifwipfs ilvhcvdkkl dkqfeslslf hpsnvemlss
      481 mdsasvriik pfpapqtpgr lqptpvmppv psaplapkld hqrmdtiqed pstdshaded
      541 gfekdpfpns saaaksfedl tdhpvtrsek assfklqrqn rvdsketec
//
LOCUS       XP_061010778             528 aa            linear   MAM 02-DEC-2023
DEFINITION  disintegrin and metalloproteinase domain-containing protein 17
            isoform X3 [Dama dama].
ACCESSION   XP_061010778
VERSION     XP_061010778.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154795.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..528
                     /product="disintegrin and metalloproteinase
                     domain-containing protein 17 isoform X3"
                     /calculated_mol_wt=58384
     Region          <3..178
                     /region_name="ZnMc"
                     /note="Zinc-dependent metalloprotease. This super-family
                     of metalloproteases contains two major branches, the
                     astacin-like proteases and the adamalysin/reprolysin-like
                     proteases. Both branches have wide phylogenetic
                     distribution, and contain sub-families, which...; cl00064"
                     /db_xref="CDD:469599"
     Site            order(106..107,110,116)
                     /site_type="active"
                     /db_xref="CDD:238124"
     Region          185..261
                     /region_name="DISIN"
                     /note="Homologues of snake disintegrins; smart00050"
                     /db_xref="CDD:214490"
     Region          282..343
                     /region_name="ADAM17_MPD"
                     /note="Membrane-proximal domain, switch, for ADAM17;
                     pfam16698"
                     /db_xref="CDD:465239"
     CDS             1..528
                     /gene="ADAM17"
                     /coded_by="XM_061154795.1:150..1736"
                     /db_xref="GeneID:133064538"
ORIGIN      
        1 maksypneek dawdvktlle qfsfdiaeea skvclahlft yqdfdmgtlg layvgspran
       61 shggvcpkay yspigkkniy lnsgltstkn ygktiltkea dlvtthelgh nfgaehdpdg
      121 laecapnedq ggkyvmypia vsgdhennkm fsncskqsiy ktiesksqec fqersnkvcg
      181 nsrvdegeec dpgimylnnd tccnsdctlr pgvqcsdrns pcckncqfet aqkkcqeain
      241 atckgvsyct gnssecpppg naaddtvcld lgkckdgkcv pfcereqrle scacnetdns
      301 ckvccrdpsg rclpyvdaeq knlflrkgkp ctvgfcdmng kcekrvqdvi erfwefidkl
      361 sintfgkfla dnivgsvlvf slifwipfsi lvhcvdkkld kqfeslslfh psnvemlssm
      421 dsasvriikp fpapqtpgrl qptpvmppvp saplapkldh qrmdtiqedp stdshadedg
      481 fekdpfpnss aaaksfedlt dhpvtrseka ssfklqrqnr vdsketec
//
LOCUS       XP_061010779             249 aa            linear   MAM 02-DEC-2023
DEFINITION  isoamyl acetate-hydrolyzing esterase 1 homolog [Dama dama].
ACCESSION   XP_061010779
VERSION     XP_061010779.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154796.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..249
                     /product="isoamyl acetate-hydrolyzing esterase 1 homolog"
                     /calculated_mol_wt=27394
     Region          17..217
                     /region_name="Isoamyl_acetate_hydrolase_like"
                     /note="Isoamyl-acetate hydrolyzing esterase-like proteins.
                     SGNH_hydrolase subfamily similar to the Saccharomyces
                     cerevisiae IAH1. IAH1 may be the major esterase that
                     hydrolyses isoamyl acetate in sake mash. The SGNH-family
                     of hydrolases is a diverse family of...; cd01838"
                     /db_xref="CDD:238876"
     Site            order(24,197,200)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238876"
     Site            order(24,56,89)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238876"
     Site            order(26,63,93,184,187)
                     /site_type="active"
                     /db_xref="CDD:238876"
     CDS             1..249
                     /gene="IAH1"
                     /coded_by="XM_061154796.1:26..775"
                     /db_xref="GeneID:133064539"
ORIGIN      
        1 malceavasg spllwprvll fgdsitqfsf qqggwgasla dmlvrkcdvl nrgfsgyntr
       61 wakiilprlv rkgsgldspv avtiffgand salkdenpkq hvpleefaan lrsmvrylqs
      121 vdvpegrlil itppplceaa waqeclqqgc klnrlnsvvg eyaraclqva qdcgaealdl
      181 wtlmqkdgqd fssylsdglh lsakgnefvf shlwpliekk vsslpfllpy wrdvaearpe
      241 lsllgdgdh
//
LOCUS       XP_061010780             245 aa            linear   MAM 02-DEC-2023
DEFINITION  14-3-3 protein theta [Dama dama].
ACCESSION   XP_061010780
VERSION     XP_061010780.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154797.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..245
                     /product="14-3-3 protein theta"
                     /calculated_mol_wt=27633
     Region          1..234
                     /region_name="14-3-3_theta"
                     /note="14-3-3 theta/tau (theta in mice, tau in human), an
                     isoform of 14-3-3 protein; cd10023"
                     /db_xref="CDD:206759"
     Site            order(8..9,13,15..16,18,21,58,61,65,78,82,89)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206759"
     Site            order(49,56,120,127..128,169,172..173,176,179..180,220,
                     224,227..228)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:206759"
     CDS             1..245
                     /gene="YWHAQ"
                     /coded_by="XM_061154797.1:194..931"
                     /db_xref="GeneID:133064541"
ORIGIN      
        1 mekteliqka klaeqaeryd dmatcmkavt eqgaelsnee rnllsvaykn vvggrrsawr
       61 vissieqktd tsdkklqlik dyrekvesel rsicttvlel ldkylianat npeskvfylk
      121 mkgdyfryla evacgddrkq tidnsqgayq eafdiskkem qpthpirlgl alnfsvfyye
      181 ilnnpelact laktafdeai aeldtlneds ykdstlimql lrdnltlwts dsageecdaa
      241 egaen
//
LOCUS       XP_061010781             245 aa            linear   MAM 02-DEC-2023
DEFINITION  14-3-3 protein theta [Dama dama].
ACCESSION   XP_061010781
VERSION     XP_061010781.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154798.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..245
                     /product="14-3-3 protein theta"
                     /calculated_mol_wt=27633
     Region          1..234
                     /region_name="14-3-3_theta"
                     /note="14-3-3 theta/tau (theta in mice, tau in human), an
                     isoform of 14-3-3 protein; cd10023"
                     /db_xref="CDD:206759"
     Site            order(8..9,13,15..16,18,21,58,61,65,78,82,89)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206759"
     Site            order(49,56,120,127..128,169,172..173,176,179..180,220,
                     224,227..228)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:206759"
     CDS             1..245
                     /gene="YWHAQ"
                     /coded_by="XM_061154798.1:205..942"
                     /db_xref="GeneID:133064541"
ORIGIN      
        1 mekteliqka klaeqaeryd dmatcmkavt eqgaelsnee rnllsvaykn vvggrrsawr
       61 vissieqktd tsdkklqlik dyrekvesel rsicttvlel ldkylianat npeskvfylk
      121 mkgdyfryla evacgddrkq tidnsqgayq eafdiskkem qpthpirlgl alnfsvfyye
      181 ilnnpelact laktafdeai aeldtlneds ykdstlimql lrdnltlwts dsageecdaa
      241 egaen
//
LOCUS       XP_061010782             590 aa            linear   MAM 02-DEC-2023
DEFINITION  TATA box-binding protein-associated factor RNA polymerase I subunit
            B isoform X1 [Dama dama].
ACCESSION   XP_061010782
VERSION     XP_061010782.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154799.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..590
                     /product="TATA box-binding protein-associated factor RNA
                     polymerase I subunit B isoform X1"
                     /calculated_mol_wt=68953
     Region          7..39
                     /region_name="zf-RRN7"
                     /note="Zinc-finger of RNA-polymerase I-specific TFIIB,
                     Rrn7; pfam11781"
                     /db_xref="CDD:463348"
     CDS             1..590
                     /gene="TAF1B"
                     /coded_by="XM_061154799.1:65..1837"
                     /db_xref="GeneID:133064543"
ORIGIN      
        1 mdleearefr ercsqcaavs wgltdegkyy ctschnvter srevidtgai pntkiqainr
       61 glkrkrklek gwdwyvcegf qhilyqqaea lqslgvgpel knevlhnfwk rylqkskqay
      121 cknpvypirr kstvlednss hsdwesepel lsdvsrlsfg esgaesqpdv rtpkpfpiik
      181 ashsettsvc sgsldgveys lrkekgvmkm svprtlafcy lsllwqreti tlsdllrfve
      241 eehipyihaf qhfpeemkly grdkgifaie swpnyevifk kiievatfld lprfpditen
      301 cylhpnilcm kylmevnlpd emhnltclvv katgigevdf lrfdpiakka ktvkydvqav
      361 avivvalkll fllddnlews lsniaekyne knkedkpwfd frkwyqvmkn aidekkqkwe
      421 earakflwkg ekplyysaid rpvvykrrem vvnlqkqfst lvdsapniek tkpssfqfnw
      481 teedserpcf hghslqgvlq qkgqslttkn slywlstqkf ckshckhvtt yeesnfslsy
      541 qfilnlfsfl lriktsflhe evsliekrlf kakynktnkk ssrsrkarky
//
LOCUS       XP_061010783             383 aa            linear   MAM 02-DEC-2023
DEFINITION  TATA box-binding protein-associated factor RNA polymerase I subunit
            B isoform X2 [Dama dama].
ACCESSION   XP_061010783
VERSION     XP_061010783.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154800.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..383
                     /product="TATA box-binding protein-associated factor RNA
                     polymerase I subunit B isoform X2"
                     /calculated_mol_wt=45349
     CDS             1..383
                     /gene="TAF1B"
                     /coded_by="XM_061154800.1:759..1910"
                     /db_xref="GeneID:133064543"
ORIGIN      
        1 mkmsvprtla fcylsllwqr etitlsdllr fveeehipyi hafqhfpeem klygrdkgif
       61 aieswpnyev ifkkiievat fldlprfpdi tencylhpni lcmkylmevn lpdemhnltc
      121 lvvkatgige vdflrfdpia kkaktvkydv qavavivval kllfllddnl ewslsniaek
      181 yneknkedkp wfdfrkwyqv mknaidekkq kweearakfl wkgekplyys aidrpvvykr
      241 remvvnlqkq fstlvdsapn iektkpssfq fnwteedser pcfhghslqg vlqqkgqslt
      301 tknslywlst qkfckshckh vttyeesnfs lsyqfilnlf sfllriktsf lheevsliek
      361 rlfkakynkt nkkssrsrka rky
//
LOCUS       XP_061010784             383 aa            linear   MAM 02-DEC-2023
DEFINITION  TATA box-binding protein-associated factor RNA polymerase I subunit
            B isoform X2 [Dama dama].
ACCESSION   XP_061010784
VERSION     XP_061010784.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154801.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..383
                     /product="TATA box-binding protein-associated factor RNA
                     polymerase I subunit B isoform X2"
                     /calculated_mol_wt=45349
     CDS             1..383
                     /gene="TAF1B"
                     /coded_by="XM_061154801.1:716..1867"
                     /db_xref="GeneID:133064543"
ORIGIN      
        1 mkmsvprtla fcylsllwqr etitlsdllr fveeehipyi hafqhfpeem klygrdkgif
       61 aieswpnyev ifkkiievat fldlprfpdi tencylhpni lcmkylmevn lpdemhnltc
      121 lvvkatgige vdflrfdpia kkaktvkydv qavavivval kllfllddnl ewslsniaek
      181 yneknkedkp wfdfrkwyqv mknaidekkq kweearakfl wkgekplyys aidrpvvykr
      241 remvvnlqkq fstlvdsapn iektkpssfq fnwteedser pcfhghslqg vlqqkgqslt
      301 tknslywlst qkfckshckh vttyeesnfs lsyqfilnlf sfllriktsf lheevsliek
      361 rlfkakynkt nkkssrsrka rky
//
LOCUS       XP_061010785             383 aa            linear   MAM 02-DEC-2023
DEFINITION  TATA box-binding protein-associated factor RNA polymerase I subunit
            B isoform X2 [Dama dama].
ACCESSION   XP_061010785
VERSION     XP_061010785.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154802.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..383
                     /product="TATA box-binding protein-associated factor RNA
                     polymerase I subunit B isoform X2"
                     /calculated_mol_wt=45349
     CDS             1..383
                     /gene="TAF1B"
                     /coded_by="XM_061154802.1:225..1376"
                     /db_xref="GeneID:133064543"
ORIGIN      
        1 mkmsvprtla fcylsllwqr etitlsdllr fveeehipyi hafqhfpeem klygrdkgif
       61 aieswpnyev ifkkiievat fldlprfpdi tencylhpni lcmkylmevn lpdemhnltc
      121 lvvkatgige vdflrfdpia kkaktvkydv qavavivval kllfllddnl ewslsniaek
      181 yneknkedkp wfdfrkwyqv mknaidekkq kweearakfl wkgekplyys aidrpvvykr
      241 remvvnlqkq fstlvdsapn iektkpssfq fnwteedser pcfhghslqg vlqqkgqslt
      301 tknslywlst qkfckshckh vttyeesnfs lsyqfilnlf sfllriktsf lheevsliek
      361 rlfkakynkt nkkssrsrka rky
//
LOCUS       XP_061010786             629 aa            linear   MAM 02-DEC-2023
DEFINITION  grainyhead-like protein 1 homolog isoform X1 [Dama dama].
ACCESSION   XP_061010786
VERSION     XP_061010786.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154803.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..629
                     /product="grainyhead-like protein 1 homolog isoform X1"
                     /calculated_mol_wt=70949
     Region          234..441
                     /region_name="CP2"
                     /note="CP2 transcription factor; pfam04516"
                     /db_xref="CDD:461338"
     CDS             1..629
                     /gene="GRHL1"
                     /coded_by="XM_061154803.1:128..2017"
                     /db_xref="GeneID:133064544"
ORIGIN      
        1 mtqeydnkrp vlvlqnealy sqrrsytsed eawksflenp ltaatkamms ingdedsaaa
       61 lgllydyykv prerrssaak advehpepdh skrnipnvte qplisagenr vqvlknvpfn
      121 ivlphgnqlg idkrghltap dttvtvsiaa mpthsiktes qphgfavgip pavyhpepte
      181 rvvvfdrnln adqfgsgaqp pnaqrrtpds tfsetfkegv qevffpsdls lrmpgmnsed
      241 yvfdsvsgnn feytleasks lrqkpgdstm tylnkgqfyp vtlkevsgne gvhhpiskvr
      301 svimvvfaed ksredqlrhw kywhsrqhta kqrcidiady kesfntisni eeiaynaisf
      361 twdindeakv fisvnclstd fssqkgvkgl plniqidtys ynnrsnkpvh raycqikvfc
      421 dkgaerkird eerkqskrkg kctdpssqln afsdvkvpll pshkrmditv fkpfidldtq
      481 pvlfipdvhf aglqrgahvl piaseelege gsslkrgpys seddfvippp akltrveepk
      541 rvllyvrkes eevfdalmlk tpslkglmea isdkydvpqe kigkifkkck kgilvnmddn
      601 ivkhysnedt fqlqmeesgg sfkltltei
//
LOCUS       XP_061010787             617 aa            linear   MAM 02-DEC-2023
DEFINITION  grainyhead-like protein 1 homolog isoform X2 [Dama dama].
ACCESSION   XP_061010787
VERSION     XP_061010787.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154804.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..617
                     /product="grainyhead-like protein 1 homolog isoform X2"
                     /calculated_mol_wt=69699
     Region          234..439
                     /region_name="CP2"
                     /note="CP2 transcription factor; pfam04516"
                     /db_xref="CDD:461338"
     CDS             1..617
                     /gene="GRHL1"
                     /coded_by="XM_061154804.1:128..1981"
                     /db_xref="GeneID:133064544"
ORIGIN      
        1 mtqeydnkrp vlvlqnealy sqrrsytsed eawksflenp ltaatkamms ingdedsaaa
       61 lgllydyykv prerrssaak advehpepdh skrnipnvte qplisagenr vqvlknvpfn
      121 ivlphgnqlg idkrghltap dttvtvsiaa mpthsiktes qphgfavgip pavyhpepte
      181 rvvvfdrnln adqfgsgaqp pnaqrrtpds tfsetfkegv qevffpsdls lrmpgmnsed
      241 yvfdsvsgnn feytleasks lrqkpgdstm tylnkgqfyp vtlkevsgne gvhhpiskvr
      301 svimvvfaed ksredqlrhw kywhsrqhta kqrcidiady kesfntisni eeiaynaisf
      361 twdindeakv fisvnclstd fssqkgvkgl plniqidtys ynnrsnkpvh raycqikvfc
      421 dkgaerkird eerkqskrkv sdvkvpllps hkrmditvfk pfidldtqpv lfipdvhfag
      481 lqrgahvlpi aseelegegs slkrgpysse ddfvipppak ltrveepkrv llyvrkesee
      541 vfdalmlktp slkglmeais dkydvpqeki gkifkkckkg ilvnmddniv khysnedtfq
      601 lqmeesggsf kltltei
//
LOCUS       XP_061010788             582 aa            linear   MAM 02-DEC-2023
DEFINITION  grainyhead-like protein 1 homolog isoform X3 [Dama dama].
ACCESSION   XP_061010788
VERSION     XP_061010788.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154805.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..582
                     /product="grainyhead-like protein 1 homolog isoform X3"
                     /calculated_mol_wt=65473
     Region          187..394
                     /region_name="CP2"
                     /note="CP2 transcription factor; pfam04516"
                     /db_xref="CDD:461338"
     CDS             1..582
                     /gene="GRHL1"
                     /coded_by="XM_061154805.1:222..1970"
                     /db_xref="GeneID:133064544"
ORIGIN      
        1 mmsingdeds aaalgllydy ykvprerrss aakadvehpe pdhskrnipn vteqplisag
       61 enrvqvlknv pfnivlphgn qlgidkrghl tapdttvtvs iaampthsik tesqphgfav
      121 gippavyhpe ptervvvfdr nlnadqfgsg aqppnaqrrt pdstfsetfk egvqevffps
      181 dlslrmpgmn sedyvfdsvs gnnfeytlea skslrqkpgd stmtylnkgq fypvtlkevs
      241 gnegvhhpis kvrsvimvvf aedksredql rhwkywhsrq htakqrcidi adykesfnti
      301 snieeiayna isftwdinde akvfisvncl stdfssqkgv kglplniqid tysynnrsnk
      361 pvhraycqik vfcdkgaerk irdeerkqsk rkgkctdpss qlnafsdvkv pllpshkrmd
      421 itvfkpfidl dtqpvlfipd vhfaglqrga hvlpiaseel egegsslkrg pysseddfvi
      481 pppakltrve epkrvllyvr keseevfdal mlktpslkgl meaisdkydv pqekigkifk
      541 kckkgilvnm ddnivkhysn edtfqlqmee sggsfkltlt ei
//
LOCUS       XP_061010789             522 aa            linear   MAM 02-DEC-2023
DEFINITION  Krueppel-like factor 11 isoform X1 [Dama dama].
ACCESSION   XP_061010789
VERSION     XP_061010789.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154806.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..522
                     /product="Krueppel-like factor 11 isoform X1"
                     /calculated_mol_wt=55386
     Region          41..404
                     /region_name="KLF11_N"
                     /note="N-terminal domain of Kruppel-like factor 11;
                     cd21584"
                     /db_xref="CDD:409242"
     Region          402..>459
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          409..428
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(413,415,417,419..420,423..424,427,443,445,449..450,
                     453..454,457,471,473,475,477..478,481..482,485)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          436..458
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(436,441,454,458)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          464..486
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          466..486
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..522
                     /gene="KLF11"
                     /coded_by="XM_061154806.1:73..1641"
                     /db_xref="GeneID:133064545"
ORIGIN      
        1 mhtpdsagpg daprvvdimd icesilerkr hdserstcsi leqndmeave alvcmsswgq
       61 rsqkadllki rpltpvsdsg dvttsvhvdt apselpkdfh slstlcmtpp qspdlleplt
      121 gtvvpsqvta skapvvmvvp pasagaarvl srmadgglpg pkpellesaa sppcratvtg
      181 itghaggspa pahhscptaq tqehqlpact egeaqflghv etlrdmhltd sllsmnsvsc
      241 qpcshkssgl iptdkgqqag wpiavqtcsp ksyendlark atplisipip sppvlcqmip
      301 vtgpsgllpa vlkpppqvsg glvkpvlphv apapppvfvg psvpqgtvml llpqgalpqp
      361 atscsassmp vgnsrflpla papvfiassq scapqvdfsr rrnyvchfpg crktyfkssh
      421 lkahlrthtg ekpfscswdg cdkkfarsde lsrhrrthtg ekkfvcpvcd rrfmrsdhlt
      481 kharrhvatk rvpgwqaavg rlnrvasaed pggpperala sa
//
LOCUS       XP_061010790             504 aa            linear   MAM 02-DEC-2023
DEFINITION  Krueppel-like factor 11 isoform X2 [Dama dama].
ACCESSION   XP_061010790
VERSION     XP_061010790.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154807.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..504
                     /product="Krueppel-like factor 11 isoform X2"
                     /calculated_mol_wt=53569
     Region          23..386
                     /region_name="KLF11_N"
                     /note="N-terminal domain of Kruppel-like factor 11;
                     cd21584"
                     /db_xref="CDD:409242"
     Region          384..>441
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          391..410
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(395,397,399,401..402,405..406,409,425,427,431..432,
                     435..436,439,453,455,457,459..460,463..464,467)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          418..440
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(418,423,436,440)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          446..468
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          448..468
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..504
                     /gene="KLF11"
                     /coded_by="XM_061154807.1:978..2492"
                     /db_xref="GeneID:133064545"
ORIGIN      
        1 mdicesiler krhdserstc sileqndmea vealvcmssw gqrsqkadll kirpltpvsd
       61 sgdvttsvhv dtapselpkd fhslstlcmt ppqspdllep ltgtvvpsqv taskapvvmv
      121 vppasagaar vlsrmadggl pgpkpelles aasppcratv tgitghaggs papahhscpt
      181 aqtqehqlpa ctegeaqflg hvetlrdmhl tdsllsmnsv scqpcshkss gliptdkgqq
      241 agwpiavqtc spksyendla rkatplisip ipsppvlcqm ipvtgpsgll pavlkpppqv
      301 sgglvkpvlp hvapapppvf vgpsvpqgtv mlllpqgalp qpatscsass mpvgnsrflp
      361 lapapvfias sqscapqvdf srrrnyvchf pgcrktyfks shlkahlrth tgekpfscsw
      421 dgcdkkfars delsrhrrth tgekkfvcpv cdrrfmrsdh ltkharrhva tkrvpgwqaa
      481 vgrlnrvasa edpggppera lasa
//
LOCUS       XP_061010791             159 aa            linear   MAM 02-DEC-2023
DEFINITION  cystin-1 [Dama dama].
ACCESSION   XP_061010791
VERSION     XP_061010791.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154808.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..159
                     /product="cystin-1"
                     /calculated_mol_wt=15813
     CDS             1..159
                     /gene="CYS1"
                     /coded_by="XM_061154808.1:1..480"
                     /db_xref="GeneID:133064546"
ORIGIN      
        1 mgsgssrsgr alrrlrspds rptgpggaap eggtgppvsa pavaaageea peaaagtdpg
       61 paappdggee tlrlldqlla esagwgpael aprgpalpkp aagagspvsp kqsaedhpeg
      121 shvseapgsc hkkperqsai tydyseeelm asiereycc
//
LOCUS       XP_061010792             389 aa            linear   MAM 02-DEC-2023
DEFINITION  ribonucleoside-diphosphate reductase subunit M2 [Dama dama].
ACCESSION   XP_061010792
VERSION     XP_061010792.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154809.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..389
                     /product="ribonucleoside-diphosphate reductase subunit M2"
                     /calculated_mol_wt=44711
     Region          70..389
                     /region_name="PLN02492"
                     /note="ribonucleoside-diphosphate reductase"
                     /db_xref="CDD:215272"
     Site            order(80,91,98,163..164,167,170..171,174,177,194..195,198)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153108"
     Site            order(102,138,169,172,176,264..265,269)
                     /site_type="active"
                     /note="putative radical transfer pathway [active]"
                     /db_xref="CDD:153108"
     Site            order(138,169,172,232,266,269)
                     /site_type="other"
                     /note="diiron center [ion binding]"
                     /db_xref="CDD:153108"
     Site            176
                     /site_type="other"
                     /note="tyrosyl radical"
                     /db_xref="CDD:153108"
     CDS             1..389
                     /gene="RRM2"
                     /coded_by="XM_061154809.1:115..1284"
                     /db_xref="GeneID:133064548"
ORIGIN      
        1 mlsvrvplat iadpqqqqls plkglsladk entppslsgt rvlasktarr ifqepsepnp
       61 klsapsvede pllrenprrf vifpieyhdi wqmykkaeas fwtaeevdls kdiqhwealk
      121 peeryfishv laffaasdgi vnenlverfs qevqitearc fygfqiamen ihsemyslli
      181 dtyikdsker eflfnaietm pcvkkkadwa lrwigdkeat ygervvafaa vegiffsgsf
      241 asifwlkkrg lmpgltfsne lisrdeglhc dfaclmfkhl lhkpseqrvk eiivnavrie
      301 qefltealpv kligmnctlm kqyiefvadr lmlelgfskv frvenpfdfm enislegktn
      361 ffekrvgeyq rmgvmsspte nsftldadf
//
LOCUS       XP_061010793             193 aa            linear   MAM 02-DEC-2023
DEFINITION  hippocalcin-like protein 1 [Dama dama].
ACCESSION   XP_061010793
VERSION     XP_061010793.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154810.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..193
                     /product="hippocalcin-like protein 1"
                     /calculated_mol_wt=22154
     Region          21..175
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..193
                     /gene="HPCAL1"
                     /coded_by="XM_061154810.1:400..981"
                     /db_xref="GeneID:133064549"
ORIGIN      
        1 mgkqnsklrp evlqdlrent eftdhelqew ykgflkdcpt ghltvdefkk iyanffpygd
       61 askfaehvfr tfdtngdgti dfrefiials vtsrgkleqk lkwafsmydl dgngyisrse
      121 mleivqaiyk mvssvmkmpe destpekrtd kifrqmdtnn dgklsleefi kgaksdpsiv
      181 rllqcdpssa sqf
//
LOCUS       XP_061010794             461 aa            linear   MAM 02-DEC-2023
DEFINITION  ornithine decarboxylase [Dama dama].
ACCESSION   XP_061010794
VERSION     XP_061010794.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154811.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..461
                     /product="ornithine decarboxylase"
                     /calculated_mol_wt=51081
     Region          37..408
                     /region_name="PLPDE_III_ODC"
                     /note="Type III Pyridoxal 5-phosphate (PLP)-Dependent
                     Enzyme Ornithine Decarboxylase; cd00622"
                     /db_xref="CDD:143482"
     Site            order(38,69,90..91,93..94,116,121,134,137,141,168..170,
                     291,293..294,315,317,319,322..323,331,333,357,359,361,364,
                     393,395,397..399,401)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143482"
     Site            order(67,69,88,154,197,200,236..237,274..277,332,360,389)
                     /site_type="active"
                     /db_xref="CDD:143482"
     Site            order(67,69,88,154,197,200,236..237,274..277,360,389)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate (PLP) binding site [chemical
                     binding]"
                     /db_xref="CDD:143482"
     Site            order(69,360)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143482"
     Site            order(331..332,360..361,389,397)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:143482"
     CDS             1..461
                     /gene="ODC1"
                     /coded_by="XM_061154811.1:300..1685"
                     /db_xref="GeneID:133064550"
ORIGIN      
        1 mnsfsneefd chfldegfta kdildqkine vsssddkdaf yvadlgdilk khlrwlkalp
       61 rvtpfyavkc ndsrtivktl aaigtgfdca skteiqlvqs lgvpperiiy anpckqvsqi
      121 kyaanngvqm mtfdsevelm kvarahpkak lvlriatdds kavcrlsvkf gatlktsrll
      181 lerakeldid vigvsfhvgs gctdpetfvq aisdarcvfd mgaevgfnmy lldigggfpg
      241 sedvklkfee itsvinpald kyfpsdsgvr iiaepgryyv asaftlavni iakklvlkeq
      301 tgsddeeess ertfmyyvnd gvygsfncil ydhahvkpll qkrpkpdeky ysssiwgptc
      361 dgldriverc nlpemhvgdw mlfenmgayt vaaastfngf qrptiyyvms gptwqlmqqi
      421 rtqdfppgve epdvgplpvs caqesgmkrh saacastrin v
//
LOCUS       XP_061010795             461 aa            linear   MAM 02-DEC-2023
DEFINITION  ornithine decarboxylase [Dama dama].
ACCESSION   XP_061010795
VERSION     XP_061010795.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154812.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..461
                     /product="ornithine decarboxylase"
                     /calculated_mol_wt=51081
     Region          37..408
                     /region_name="PLPDE_III_ODC"
                     /note="Type III Pyridoxal 5-phosphate (PLP)-Dependent
                     Enzyme Ornithine Decarboxylase; cd00622"
                     /db_xref="CDD:143482"
     Site            order(38,69,90..91,93..94,116,121,134,137,141,168..170,
                     291,293..294,315,317,319,322..323,331,333,357,359,361,364,
                     393,395,397..399,401)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143482"
     Site            order(67,69,88,154,197,200,236..237,274..277,332,360,389)
                     /site_type="active"
                     /db_xref="CDD:143482"
     Site            order(67,69,88,154,197,200,236..237,274..277,360,389)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate (PLP) binding site [chemical
                     binding]"
                     /db_xref="CDD:143482"
     Site            order(69,360)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143482"
     Site            order(331..332,360..361,389,397)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:143482"
     CDS             1..461
                     /gene="ODC1"
                     /coded_by="XM_061154812.1:321..1706"
                     /db_xref="GeneID:133064550"
ORIGIN      
        1 mnsfsneefd chfldegfta kdildqkine vsssddkdaf yvadlgdilk khlrwlkalp
       61 rvtpfyavkc ndsrtivktl aaigtgfdca skteiqlvqs lgvpperiiy anpckqvsqi
      121 kyaanngvqm mtfdsevelm kvarahpkak lvlriatdds kavcrlsvkf gatlktsrll
      181 lerakeldid vigvsfhvgs gctdpetfvq aisdarcvfd mgaevgfnmy lldigggfpg
      241 sedvklkfee itsvinpald kyfpsdsgvr iiaepgryyv asaftlavni iakklvlkeq
      301 tgsddeeess ertfmyyvnd gvygsfncil ydhahvkpll qkrpkpdeky ysssiwgptc
      361 dgldriverc nlpemhvgdw mlfenmgayt vaaastfngf qrptiyyvms gptwqlmqqi
      421 rtqdfppgve epdvgplpvs caqesgmkrh saacastrin v
//
LOCUS       XP_061010796             688 aa            linear   MAM 02-DEC-2023
DEFINITION  nucleolar protein 10 [Dama dama].
ACCESSION   XP_061010796
VERSION     XP_061010796.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154813.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..688
                     /product="nucleolar protein 10"
                     /calculated_mol_wt=79938
     Region          55..95
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          108..153
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          180..223
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <190..330
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          233..267
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          275..311
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          482..508
                     /region_name="NUC153"
                     /note="NUC153 domain; pfam08159"
                     /db_xref="CDD:462385"
     CDS             1..688
                     /gene="NOL10"
                     /coded_by="XM_061154813.1:125..2191"
                     /db_xref="GeneID:133064551"
ORIGIN      
        1 mqvsslnevk iyslscgksl pewlsdrkkr alqkkdvdvr rrieliqdfe mptvcttikv
       61 skdeqyilat gtykprvrcy dtyqlslkfe rcldsevvtf etlsddyski vflhndryie
      121 fhsqsgfyyk tripkfgrdf syhypscdly fvgassevyr lnleqgryln plqtdaaenn
      181 vcdinsvhgl fatgtiegrv ecwdprtrgr vgvldcalss vtaeseinsl ptisalkfng
      241 altmavgtst gqvllydlrs dkpllvkdhq yglpiksvhf qdsldlilsa dsriikmwnk
      301 nsgkiftsle pehdlndvcl ypnsgmllta neapkmgiyy ipvlgpaprw csfldnltee
      361 leenpestvy ddykfvtkkd lenlglthli gspflraymh gffmdirlyh kvklmvnpfa
      421 yeeyrkdkir qkieetraqr vqlkklpkvn kelalkliee eeekqkstwk kkvkslpnil
      481 tddrfkvmfe npdfqvdees eefrllnplv skisekrkkk lrlleqqelh gkeeeeepeg
      541 kpsdaesses sddekdwvae vrkqrrllrq eekvkrqeql redqqtvlkp qfyeikagee
      601 frsfkdsatk qklmnktled rlkleakngt lsvsdttvgs kqltftlkks eqqkqqqeae
      661 klhrqerkav rrsaghlrsr prrgrpfh
//
LOCUS       XP_061010797             427 aa            linear   MAM 02-DEC-2023
DEFINITION  V-type proton ATPase subunit C 2 isoform X1 [Dama dama].
ACCESSION   XP_061010797
VERSION     XP_061010797.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154814.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..427
                     /product="V-type proton ATPase subunit C 2 isoform X1"
                     /calculated_mol_wt=48542
     Region          4..417
                     /region_name="V-ATPase_C"
                     /note="V-ATPase subunit C; pfam03223"
                     /db_xref="CDD:460851"
     Region          55..75
                     /region_name="3-helical coiled coil"
                     /note="3-helical coiled coil [structural motif]"
                     /db_xref="CDD:270211"
     Region          120..146
                     /region_name="3-helical coiled coil"
                     /note="3-helical coiled coil [structural motif]"
                     /db_xref="CDD:270211"
     Region          274..351
                     /region_name="3-helical coiled coil"
                     /note="3-helical coiled coil [structural motif]"
                     /db_xref="CDD:270211"
     CDS             1..427
                     /gene="ATP6V1C2"
                     /coded_by="XM_061154814.1:276..1559"
                     /db_xref="GeneID:133064552"
ORIGIN      
        1 msefwlisap gdkenlqale rmnivtaksn lsyntkftip dfkvgtldsl vglsdelakl
       61 difaeslirr maqsvvevme dakgkvqenl langvdltsf lthfewdmak ypakqplvsv
      121 vdtlakqlaq ietdlksrta ayntlktnle nlekksmgnl ftrtlsdivs kedfvldsey
      181 litllvivpk psyvqwqkty eslsdmvvpr stkliaedke gglftvtlfr kviddfktka
      241 kenkftvref yydekeikre reemtrllsd kkqqyqtscv alkkgsstfp dhkvkvtplg
      301 npdrpaagqs drerecegeg egpllrwlkv nfseafiawi hikalrvfve svlryglpvn
      361 fqavllqphk ksctkrlrev lnsvfrhlde vaaasildas veipglqlsn qdyfpyvyfh
      421 idlslld
//
LOCUS       XP_061010798             427 aa            linear   MAM 02-DEC-2023
DEFINITION  V-type proton ATPase subunit C 2 isoform X1 [Dama dama].
ACCESSION   XP_061010798
VERSION     XP_061010798.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154815.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..427
                     /product="V-type proton ATPase subunit C 2 isoform X1"
                     /calculated_mol_wt=48542
     Region          4..417
                     /region_name="V-ATPase_C"
                     /note="V-ATPase subunit C; pfam03223"
                     /db_xref="CDD:460851"
     Region          55..75
                     /region_name="3-helical coiled coil"
                     /note="3-helical coiled coil [structural motif]"
                     /db_xref="CDD:270211"
     Region          120..146
                     /region_name="3-helical coiled coil"
                     /note="3-helical coiled coil [structural motif]"
                     /db_xref="CDD:270211"
     Region          274..351
                     /region_name="3-helical coiled coil"
                     /note="3-helical coiled coil [structural motif]"
                     /db_xref="CDD:270211"
     CDS             1..427
                     /gene="ATP6V1C2"
                     /coded_by="XM_061154815.1:279..1562"
                     /db_xref="GeneID:133064552"
ORIGIN      
        1 msefwlisap gdkenlqale rmnivtaksn lsyntkftip dfkvgtldsl vglsdelakl
       61 difaeslirr maqsvvevme dakgkvqenl langvdltsf lthfewdmak ypakqplvsv
      121 vdtlakqlaq ietdlksrta ayntlktnle nlekksmgnl ftrtlsdivs kedfvldsey
      181 litllvivpk psyvqwqkty eslsdmvvpr stkliaedke gglftvtlfr kviddfktka
      241 kenkftvref yydekeikre reemtrllsd kkqqyqtscv alkkgsstfp dhkvkvtplg
      301 npdrpaagqs drerecegeg egpllrwlkv nfseafiawi hikalrvfve svlryglpvn
      361 fqavllqphk ksctkrlrev lnsvfrhlde vaaasildas veipglqlsn qdyfpyvyfh
      421 idlslld
//
LOCUS       XP_061010799             427 aa            linear   MAM 02-DEC-2023
DEFINITION  V-type proton ATPase subunit C 2 isoform X1 [Dama dama].
ACCESSION   XP_061010799
VERSION     XP_061010799.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154816.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..427
                     /product="V-type proton ATPase subunit C 2 isoform X1"
                     /calculated_mol_wt=48542
     Region          4..417
                     /region_name="V-ATPase_C"
                     /note="V-ATPase subunit C; pfam03223"
                     /db_xref="CDD:460851"
     Region          55..75
                     /region_name="3-helical coiled coil"
                     /note="3-helical coiled coil [structural motif]"
                     /db_xref="CDD:270211"
     Region          120..146
                     /region_name="3-helical coiled coil"
                     /note="3-helical coiled coil [structural motif]"
                     /db_xref="CDD:270211"
     Region          274..351
                     /region_name="3-helical coiled coil"
                     /note="3-helical coiled coil [structural motif]"
                     /db_xref="CDD:270211"
     CDS             1..427
                     /gene="ATP6V1C2"
                     /coded_by="XM_061154816.1:253..1536"
                     /db_xref="GeneID:133064552"
ORIGIN      
        1 msefwlisap gdkenlqale rmnivtaksn lsyntkftip dfkvgtldsl vglsdelakl
       61 difaeslirr maqsvvevme dakgkvqenl langvdltsf lthfewdmak ypakqplvsv
      121 vdtlakqlaq ietdlksrta ayntlktnle nlekksmgnl ftrtlsdivs kedfvldsey
      181 litllvivpk psyvqwqkty eslsdmvvpr stkliaedke gglftvtlfr kviddfktka
      241 kenkftvref yydekeikre reemtrllsd kkqqyqtscv alkkgsstfp dhkvkvtplg
      301 npdrpaagqs drerecegeg egpllrwlkv nfseafiawi hikalrvfve svlryglpvn
      361 fqavllqphk ksctkrlrev lnsvfrhlde vaaasildas veipglqlsn qdyfpyvyfh
      421 idlslld
//
LOCUS       XP_061010800             344 aa            linear   MAM 02-DEC-2023
DEFINITION  V-type proton ATPase subunit C 2 isoform X2 [Dama dama].
ACCESSION   XP_061010800
VERSION     XP_061010800.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154817.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..344
                     /product="V-type proton ATPase subunit C 2 isoform X2"
                     /calculated_mol_wt=39444
     Region          <12..334
                     /region_name="V-ATPase_C"
                     /note="V-ATPase subunit C; pfam03223"
                     /db_xref="CDD:460851"
     Region          37..63
                     /region_name="3-helical coiled coil"
                     /note="3-helical coiled coil [structural motif]"
                     /db_xref="CDD:270211"
     Region          191..268
                     /region_name="3-helical coiled coil"
                     /note="3-helical coiled coil [structural motif]"
                     /db_xref="CDD:270211"
     CDS             1..344
                     /gene="ATP6V1C2"
                     /coded_by="XM_061154817.1:161..1195"
                     /db_xref="GeneID:133064552"
ORIGIN      
        1 mswrssisll kvdltsflth fewdmakypa kqplvsvvdt lakqlaqiet dlksrtaayn
       61 tlktnlenle kksmgnlftr tlsdivsked fvldseylit llvivpkpsy vqwqktyesl
      121 sdmvvprstk liaedkeggl ftvtlfrkvi ddfktkaken kftvrefyyd ekeikreree
      181 mtrllsdkkq qyqtscvalk kgsstfpdhk vkvtplgnpd rpaagqsdre recegegegp
      241 llrwlkvnfs eafiawihik alrvfvesvl ryglpvnfqa vllqphkksc tkrlrevlns
      301 vfrhldevaa asildasvei pglqlsnqdy fpyvyfhidl slld
//
LOCUS       XP_061010801             440 aa            linear   MAM 02-DEC-2023
DEFINITION  protein disulfide-isomerase A6 [Dama dama].
ACCESSION   XP_061010801
VERSION     XP_061010801.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154818.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..440
                     /product="protein disulfide-isomerase A6"
                     /calculated_mol_wt=47994
     Region          26..128
                     /region_name="PDI_a_P5"
                     /note="PDIa family, P5 subfamily; composed of eukaryotic
                     proteins similar to human P5, a PDI-related protein with a
                     domain structure of aa'b (where a and a' are redox active
                     TRX domains and b is a redox inactive TRX-like domain).
                     Like PDI, P5 is located in the...; cd03001"
                     /db_xref="CDD:239299"
     Site            order(55,58,118)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239299"
     Region          161..266
                     /region_name="PDI_a_P5"
                     /note="PDIa family, P5 subfamily; composed of eukaryotic
                     proteins similar to human P5, a PDI-related protein with a
                     domain structure of aa'b (where a and a' are redox active
                     TRX domains and b is a redox inactive TRX-like domain).
                     Like PDI, P5 is located in the...; cd03001"
                     /db_xref="CDD:239299"
     Site            order(190,193,256)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239299"
     Region          275..404
                     /region_name="P5_C"
                     /note="P5 family, C-terminal redox inactive TRX-like
                     domain; P5 is a protein disulfide isomerase (PDI)-related
                     protein with a domain structure of aa'b (where a and a'
                     are redox active TRX domains and b is a redox inactive
                     TRX-like domain). Like PDI, P5 is...; cd02983"
                     /db_xref="CDD:239281"
     CDS             1..440
                     /gene="PDIA6"
                     /coded_by="XM_061154818.1:119..1441"
                     /db_xref="GeneID:133064553"
ORIGIN      
        1 marlvlglms ctlfitvngl ysssddviel tpsnfnrevi qsdslwlvef yapwcghcqr
       61 ltpewkkaat alkdvvkvga vdadkhqslg gqygvqgfpt ikifgsnknk pedyqggrtg
      121 eaivdaalsa lrqlvkdrlg grgngyssgk qgrgdssskk dvieltddsf dknvldsedv
      181 wmvefyapwc ghcknlepew aaaatevkeq tkgkvklaav datvnqvlas rygirgfpti
      241 kifqkgespv dydggrtrsd ivsraldlfs dnapppelle iinediakkt ceehqlcvva
      301 vlphildtga agrnsylevl lkladkykkk mwgwlwteag aqselenalg iggfgypama
      361 ainarkmkfa llkgsfseqg ineflrelsf grgstapvgg gafpaistre pwdgkdgelp
      421 veddidlsdv elddlekdel
//
LOCUS       XP_061010802             201 aa            linear   MAM 02-DEC-2023
DEFINITION  solute carrier family 66 member 3 [Dama dama].
ACCESSION   XP_061010802
VERSION     XP_061010802.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154819.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..201
                     /product="solute carrier family 66 member 3"
                     /calculated_mol_wt=22630
     CDS             1..201
                     /gene="SLC66A3"
                     /coded_by="XM_061154819.1:123..728"
                     /db_xref="GeneID:133064556"
ORIGIN      
        1 metllwlcnw stlgvcaalk lpqisavlga rssrgislps lllelagflv flryqcyyey
       61 plltyleypi liaqdlilll cvfhfngdvr raapyiiacv sawfiltlqq wildlamnlc
      121 tfisaaskfa qlqylwksrd sgavsaltws lasytcaari mttlittndl tilirfviml
      181 alniwvtati lhyrktdiks e
//
LOCUS       XP_061010803            1388 aa            linear   MAM 02-DEC-2023
DEFINITION  rho-associated protein kinase 2 [Dama dama].
ACCESSION   XP_061010803
VERSION     XP_061010803.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154820.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1388
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1388
                     /product="rho-associated protein kinase 2"
                     /calculated_mol_wt=160691
     Region          39..417
                     /region_name="STKc_ROCK2"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Rho-associated coiled-coil containing protein kinase 2;
                     cd05621"
                     /db_xref="CDD:270771"
     Site            order(53,65,67,71,74..75,78,84..88,91,157,404..406,
                     408..409,411,416)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:270771"
     Site            order(98..102,106,119,121,153,169..170,172,176,178,214,
                     216,218..219,221,231..232,235,250..255,286,292,295)
                     /site_type="active"
                     /db_xref="CDD:270771"
     Site            order(98..102,106,119,121,153,170..172,176,214,216,
                     218..219,221,231..232)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270771"
     Site            order(102,176,178,214,216,218,235,250..255,286,292,295)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270771"
     Site            231..255
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270771"
     Site            410..415
                     /site_type="other"
                     /note="hydrophobic motif (HM)"
                     /db_xref="CDD:270771"
     Region          <430..1126
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          505..571
                     /region_name="HR1_ROCK2"
                     /note="Protein kinase C-related kinase homology region 1
                     (HR1) Rho-binding domain of Rho-associated coiled-coil
                     containing protein kinase 2; cd11638"
                     /db_xref="CDD:212028"
     Site            order(513,516,519..520,523..524,526..527,530..531,
                     533..534,550..551,554,557..558,561)
                     /site_type="other"
                     /note="putative Rho binding site 1 [polypeptide binding]"
                     /db_xref="CDD:212028"
     Site            order(521..522,524..525,528..529,531..532,535..536,
                     545..546,548)
                     /site_type="other"
                     /note="putative Rho binding site 2 [polypeptide binding]"
                     /db_xref="CDD:212028"
     Region          856..936
                     /region_name="ROCK_SBD"
                     /note="Shroom-binding domain found in Rho-associated
                     coiled-coil containing protein kinase; cd22250"
                     /db_xref="CDD:409019"
     Site            order(859,862..863,865..866,869..870,872..873,876..877,
                     879..880,883..884,886..887,890..891,900,904)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:409019"
     Site            order(861,864..865,867..869,871..872,874..879,882)
                     /site_type="other"
                     /note="Shroom binding site [polypeptide binding]"
                     /db_xref="CDD:409019"
     Region          1151..1257
                     /region_name="PH_ROCK"
                     /note="Rho-associated coiled-coil containing protein
                     kinase pleckstrin homology (PH) domain; cd01242"
                     /db_xref="CDD:269948"
     Region          1250..1320
                     /region_name="C1_ROCK2"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in Rho-associated coiled-coil containing protein
                     kinase 2 (ROCK2) and similar proteins; cd20875"
                     /db_xref="CDD:410425"
     CDS             1..1388
                     /gene="ROCK2"
                     /coded_by="XM_061154820.1:7..4173"
                     /db_xref="GeneID:133064557"
ORIGIN      
        1 msrppttgkm pgapeavsgd gagasrqrkl ealirdprsp inveslldgl nslvldldfp
       61 alrknknidn flnryekivk kirglqmkae dydvvkvigr gafgevqlvr hkasqkvyam
      121 kllskfemik rsdsaffwee rdimafansp wvvqlfcafq ddkylymvme ympggdlvnl
      181 msnydvpekw akfytaevvl aldaihsmgl ihrdvkpdnm lldkhghlkl adfgtcmkmd
      241 etgmvhcdta vgtpdyispe vlksqggdgy ygrecdwwsv gvflfemlvg dtpfyadslv
      301 gtyskimdhk nslcfpedae iskhaknlic afltdrevrl grngveeikq hpffkndqwn
      361 wdniretaap vvpelssdid ssnfddiedd kgdvetfpip kafvgnqlpf igftyyrenl
      421 llsdspscke ndsiqsrkne esqeiqkkly tleehlstei qakeeleqkc ksvntrlekv
      481 akeleeeitl rknvestlrq lerekallqh knaeyqrkad headkkrnle ndvnslkdql
      541 edlkkrnqns qistekvnql qrqldetnal lrtesdtaar lrktqaessk qiqqlesnnr
      601 dlqdknclle taklklekef inlqsvlese rrdrthgsei indlqgrisg leedvkngki
      661 llakvelekr qlqerftdle keknnmeidm tyqlkviqqs leqeetehka tkarladknk
      721 iyesieeaks eamkemekkl seertlkqkv enllleaekr csildcdlkq sqqkinellk
      781 qkdvlnedvr nltlkieqet qkrcltqndl kmqtqqvntl kmsekqlkqe nnhllemkms
      841 lekqnaelrk erqdadgqmk elqdqleaeq yfstlyktqv relkeeceek tklckelqqk
      901 kqelqderds laaqleitlt kadseqlars iaeeqysdle kekimkelei kemmarhkqe
      961 ltekdatias leetnrtlts dvanlaneke elnnklkevq eqlsrlkdee isaaaikaqf
     1021 ekqlltertl ktqavnklae imnrkepvkr gndtdvrrke kenrklhmel kserekltqq
     1081 mikyqkelne mqaqiaeesq irielqmtld skdsdieqlr sqlqalhigl dsssigsgpg
     1141 dteaddgfpe srlegwlslp vrnntkkfgw vkkyvivssk kilfydseqd keqsnpymvl
     1201 didklfhvrp vtqtdvyrad akeiprifqi lyanegeskk eqefpvepvg eksnyichkg
     1261 hefiptlyhf ptnceacmkp lwhmfkpppa lecrrchikc hkdhmdkkee iiapckvyyd
     1321 issaknllll ansteeqqkw vsrlvkkipk kppapdpfar ssprtsmkiq qnqsirrpsr
     1381 qlapnkps
//
LOCUS       XP_061010804             285 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor E2F6 isoform X1 [Dama dama].
ACCESSION   XP_061010804
VERSION     XP_061010804.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154821.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..285
                     /product="transcription factor E2F6 isoform X1"
                     /calculated_mol_wt=32127
     Region          64..128
                     /region_name="E2F_TDP"
                     /note="E2F/DP family winged-helix DNA-binding domain;
                     pfam02319"
                     /db_xref="CDD:460530"
     Region          139..239
                     /region_name="E2F_DD"
                     /note="Dimerization domain of E2F transcription factors;
                     cd14660"
                     /db_xref="CDD:271137"
     Site            order(139..140,143..144,146..147,150..151,153..154,
                     157..158,160..161,163..165,167..168,171,179..184,187..188,
                     191,195..203,219..226,228..231,233,239)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:271137"
     Region          139..173
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:271137"
     Site            order(205..214,216..217,220)
                     /site_type="other"
                     /note="RbC binding site [polypeptide binding]"
                     /db_xref="CDD:271137"
     CDS             1..285
                     /gene="E2F6"
                     /coded_by="XM_061154821.1:307..1164"
                     /db_xref="GeneID:133064558"
ORIGIN      
        1 msqqrparkl psllvdpaee tvrrrcrdpi nvegllpski rinlednvqy vsmrkalkvk
       61 rprfdvslvy ltrkfmdlvr sapggildln kvatklgvrk rrvyditnvl dginlvekks
      121 knhirwigsd lsnfgavpqq kklqeelsdl stmedaldel ikdcaqqlfe ltddkenerl
      181 ayvtyqdihs iqafheqivi avkapaetrl dvpaprkdsi tvhirstkgp idvylceveq
      241 gshssnktsd svgtsssksk psehpqpeke enpphqseev levsn
//
LOCUS       XP_061010805             233 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor E2F6 isoform X2 [Dama dama].
ACCESSION   XP_061010805
VERSION     XP_061010805.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154822.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..233
                     /product="transcription factor E2F6 isoform X2"
                     /calculated_mol_wt=26143
     Region          12..76
                     /region_name="E2F_TDP"
                     /note="E2F/DP family winged-helix DNA-binding domain;
                     pfam02319"
                     /db_xref="CDD:460530"
     Region          87..187
                     /region_name="E2F_DD"
                     /note="Dimerization domain of E2F transcription factors;
                     cd14660"
                     /db_xref="CDD:271137"
     Site            order(87..88,91..92,94..95,98..99,101..102,105..106,
                     108..109,111..113,115..116,119,127..132,135..136,139,
                     143..151,167..174,176..179,181,187)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:271137"
     Region          87..121
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:271137"
     Site            order(153..162,164..165,168)
                     /site_type="other"
                     /note="RbC binding site [polypeptide binding]"
                     /db_xref="CDD:271137"
     CDS             1..233
                     /gene="E2F6"
                     /coded_by="XM_061154822.1:595..1296"
                     /db_xref="GeneID:133064558"
ORIGIN      
        1 mrkalkvkrp rfdvslvylt rkfmdlvrsa pggildlnkv atklgvrkrr vyditnvldg
       61 inlvekkskn hirwigsdls nfgavpqqkk lqeelsdlst medaldelik dcaqqlfelt
      121 ddkenerlay vtyqdihsiq afheqiviav kapaetrldv paprkdsitv hirstkgpid
      181 vylceveqgs hssnktsdsv gtssskskps ehpqpekeen pphqseevle vsn
//
LOCUS       XP_061010806             233 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor E2F6 isoform X2 [Dama dama].
ACCESSION   XP_061010806
VERSION     XP_061010806.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154823.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..233
                     /product="transcription factor E2F6 isoform X2"
                     /calculated_mol_wt=26143
     Region          12..76
                     /region_name="E2F_TDP"
                     /note="E2F/DP family winged-helix DNA-binding domain;
                     pfam02319"
                     /db_xref="CDD:460530"
     Region          87..187
                     /region_name="E2F_DD"
                     /note="Dimerization domain of E2F transcription factors;
                     cd14660"
                     /db_xref="CDD:271137"
     Site            order(87..88,91..92,94..95,98..99,101..102,105..106,
                     108..109,111..113,115..116,119,127..132,135..136,139,
                     143..151,167..174,176..179,181,187)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:271137"
     Region          87..121
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:271137"
     Site            order(153..162,164..165,168)
                     /site_type="other"
                     /note="RbC binding site [polypeptide binding]"
                     /db_xref="CDD:271137"
     CDS             1..233
                     /gene="E2F6"
                     /coded_by="XM_061154823.1:591..1292"
                     /db_xref="GeneID:133064558"
ORIGIN      
        1 mrkalkvkrp rfdvslvylt rkfmdlvrsa pggildlnkv atklgvrkrr vyditnvldg
       61 inlvekkskn hirwigsdls nfgavpqqkk lqeelsdlst medaldelik dcaqqlfelt
      121 ddkenerlay vtyqdihsiq afheqiviav kapaetrldv paprkdsitv hirstkgpid
      181 vylceveqgs hssnktsdsv gtssskskps ehpqpekeen pphqseevle vsn
//
LOCUS       XP_061010807             230 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor E2F6 isoform X3 [Dama dama].
ACCESSION   XP_061010807
VERSION     XP_061010807.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154824.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..230
                     /product="transcription factor E2F6 isoform X3"
                     /calculated_mol_wt=26332
     Region          64..128
                     /region_name="E2F_TDP"
                     /note="E2F/DP family winged-helix DNA-binding domain;
                     pfam02319"
                     /db_xref="CDD:460530"
     Region          139..>217
                     /region_name="E2F_DD"
                     /note="Dimerization domain of E2F transcription factors;
                     cd14660"
                     /db_xref="CDD:271137"
     Region          139..173
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:271137"
     Site            order(205..214,216..217)
                     /site_type="other"
                     /note="RbC binding site [polypeptide binding]"
                     /db_xref="CDD:271137"
     CDS             1..230
                     /gene="E2F6"
                     /coded_by="XM_061154824.1:307..999"
                     /db_xref="GeneID:133064558"
ORIGIN      
        1 msqqrparkl psllvdpaee tvrrrcrdpi nvegllpski rinlednvqy vsmrkalkvk
       61 rprfdvslvy ltrkfmdlvr sapggildln kvatklgvrk rrvyditnvl dginlvekks
      121 knhirwigsd lsnfgavpqq kklqeelsdl stmedaldel ikdcaqqlfe ltddkenerl
      181 ayvtyqdihs iqafheqivi avkapaetrl dvpaprkkki lhikvrkclk
//
LOCUS       XP_061010808            1959 aa            linear   MAM 02-DEC-2023
DEFINITION  protein GREB1 [Dama dama].
ACCESSION   XP_061010808
VERSION     XP_061010808.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154825.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1959
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1959
                     /product="protein GREB1"
                     /calculated_mol_wt=217071
     Region          1..1106
                     /region_name="GREB1"
                     /note="GREB1 N-terminal region; pfam15782"
                     /db_xref="CDD:464866"
     Region          1266..1959
                     /region_name="GREB1_C"
                     /note="GREB1 C-terminal region; pfam20267"
                     /db_xref="CDD:466417"
     CDS             1..1959
                     /gene="GREB1"
                     /coded_by="XM_061154825.1:157..6036"
                     /db_xref="GeneID:133064559"
ORIGIN      
        1 mgnsyagqlk ttrfeevlhn sieaslrsns lvprpifsql yleaeqqlsa leggsqvdne
       61 eeeeegdggl eqncppnpyq mhpppegcct tdgfcqagkd lrlvsissep idvpvgfllv
      121 gakspslpdh llvcavdkrf lpddnghnal lgfsgncvgc gkkgfcyfte fsnhinlklt
      181 tqpkkqkhlk yylvrnaqga ltkgplicwk gsefrsrqas vgacssslfp pldssgppap
      241 fpgepgpgtt psaplgapqa gpapdhsalt aalgpavfng kdspkhqplv knrlsavprp
      301 salgilsnsg ppkkrhkgws pespsasdgg ypqgagtrak yesagvtcmp qvglvgpasv
      361 tfpvvasgep vsvpdnllki ckakpvifkg hgnfpylcgn lndvvvspll ytcyqnsqsi
      421 srayeqygas tiqpiseemq llltvyylvq laadqvplme dleqiflrsw reshlteirq
      481 yqqappqpfp pvqgavapvt saqlpwlagl aasscndsvh iiectyslae glsemfrlli
      541 egklaktnyv viicacrsaa idsciavtgk yqarilsesl ltpaeyqkev nyelvtgkvd
      601 slgaffstlc pegdidilld kfhqenqglv sssltassvt ksasldvsga pvctsyhlep
      661 hrirpfqlav aqkllshvcs iadsstqnld lgsfekvdfl icippsevty qqtlfhvwhs
      721 gvllelglek ehvtrqrveq yvlkldaeaq tkfksflqns fqnphtlfvl ihdhahwdlv
      781 ssavhnlysq sdpsvglvdr llnckevkea pnivtlhvts fpyalqtqht lvspyneihw
      841 pasysdgvdl ypenkkyfgl sefiestlsg hslpllryds sfeamvtalg krfprlhsav
      901 irtfvlvqhy aaammavsgl sqmknytsve tleitqnlin spkqcpcghg lmvllrvpcs
      961 plaavayerl ahvrarlale ehfeiilgnp asgitigkhf lkqlkvwqni edaewrpqty
     1021 leleglpcil ifsgmdphge slprslrycd lrlinssclv rtaleqelgl aayfvsseap
     1081 lekgarteal esdgeklsst dnedeelvte gstsekrspv krersrshds assslsskas
     1141 kleregvcee laflessapc gessagpsqg erarsplpcg pseearapge kqrlraaggp
     1201 asvisrhspg ltpqpdpslk sgqrgvqvsa psasssgsas spvlpaagpl vlqasqcsmt
     1261 kscrqppvvf lpklvydmvt stdgsglpka asllpshsvm wassfrplls ktmtsteqsl
     1321 yyrqwtvprp ghmdygnrae grvdgfhprr lllsgppqig ktgaylqfls ilsrmlirlt
     1381 evdvydeeei ninlredsdw hylqlsdpwp dlelfkklpf dyiihdpkye daslicshhq
     1441 svksedrgth rkpedlymrr qtarmrlskf aayntyhhce qchqymgfhp ryqlyestlh
     1501 afafsysmlg eeiqlhfiip kskehhfvfs qpggqlesmr lplvtdkshe yiksptftpt
     1561 tgrhehglfn lyhamdgash lhvlvvkeye maiykkywpn himlvlpsif nsagvgaahf
     1621 likelsyhnl elernrqeel gikpqdiwpf ivisddscvm wnvvdidggg ersrefswse
     1681 rnvslkhimq hieaspnith yaligmrkws sktgsrevre pfsrchvhdf ivlnvdltqn
     1741 vqynqnrfmc ddvdfnlrvh saglllcrfn rfsvmkkqia vgghrsfhit skvsdspmav
     1801 vpaqyicapd skhtflaapa qlllekflqh hshrffplsl knpghpvlsv dcylnlgsqi
     1861 svcyvssrph slniscsdfv fsglllylcd sfvgasflkk fhflkgatlc vicqdrnslr
     1921 qtvvrleled ewqfrlrdef qtanakedrp lffltgrhi
//
LOCUS       XP_061010809             895 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphatidate phosphatase LPIN1 isoform X1 [Dama dama].
ACCESSION   XP_061010809
VERSION     XP_061010809.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154826.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..895
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..895
                     /product="phosphatidate phosphatase LPIN1 isoform X1"
                     /calculated_mol_wt=98938
     Region          1..107
                     /region_name="Lipin_N"
                     /note="lipin, N-terminal conserved region; pfam04571"
                     /db_xref="CDD:461356"
     Region          469..562
                     /region_name="Lipin_mid"
                     /note="Lipin/Ned1/Smp2 multi-domain protein middle domain;
                     pfam16876"
                     /db_xref="CDD:465292"
     Region          631..856
                     /region_name="LNS2"
                     /note="LNS2 (Lipin/Ned1/Smp2); pfam08235"
                     /db_xref="CDD:462403"
     CDS             1..895
                     /gene="LPIN1"
                     /coded_by="XM_061154826.1:138..2825"
                     /db_xref="GeneID:133064560"
ORIGIN      
        1 mnyvgqlagq vfvtvkelyk glnpatlsgc idiivvrqpn gslqcspfhv rfgkmgvlrs
       61 rekvvdiein gesvdlhmkl gdngeaffvq etdndqevip thlatspils egasrmesql
      121 krnsadrirg ldanmsaqvs ppsetpssgs lvkkrrkrrr ksqldslkrd enmntseded
      181 mfpiemssde eaepldssrt lpddippfqe dvpkeshspv mtypqsasyp nsdrewspna
      241 spsvsrpstp ksdselvsks adrtmqknnl emlwlwgelp qatkssphkm kessplnsrk
      301 icdkmhfqai hsessdafsd qsptlarasp vqplleqnkp qteiqfvned dvealgaaap
      361 plptieepka psantapvaa sktdspsrkk dkrsrhlgad gvylddltdm dpevaalyfp
      421 kngdpsgltk pasdngarsa nqspqsvgss gvdsgvests dglrdlpsia islcgglsdn
      481 reitkdafle qavsyqqfad npaliddpnl vvkignkyyn wttaapllla mqafqkplpk
      541 atvesimrdk mprkggrwwf swrgrnttik eeskpeqcla gkshstgeqp sqlgmatrik
      601 hessssdeeh aaakpsstsh lpllssvsyk ktlrltseql kslklkngpn dvvfsvttqy
      661 qgtcrcegti ylwnwddkvv isdidgtitr sdtlghilpt lgkdwthqgi aklyhkvsqn
      721 gykflycsar aigmadmtrg ylhwvnergt vlpqgpllls psslfsalhr eviekkpekf
      781 kvqcltdikn lffpntepfy aafgnrpadv ysykqvgvsl nriftvnpkg elvqehaktn
      841 issyvrlcev vdhvfpllkr shssdfpcsd tfsnftfwre ppppfenqdv hsasa
//
LOCUS       XP_061010810             930 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphatidate phosphatase LPIN1 isoform X2 [Dama dama].
ACCESSION   XP_061010810
VERSION     XP_061010810.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154827.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..930
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..930
                     /product="phosphatidate phosphatase LPIN1 isoform X2"
                     /calculated_mol_wt=102576
     Region          1..107
                     /region_name="Lipin_N"
                     /note="lipin, N-terminal conserved region; pfam04571"
                     /db_xref="CDD:461356"
     Region          504..597
                     /region_name="Lipin_mid"
                     /note="Lipin/Ned1/Smp2 multi-domain protein middle domain;
                     pfam16876"
                     /db_xref="CDD:465292"
     Region          666..891
                     /region_name="LNS2"
                     /note="LNS2 (Lipin/Ned1/Smp2); pfam08235"
                     /db_xref="CDD:462403"
     CDS             1..930
                     /gene="LPIN1"
                     /coded_by="XM_061154827.1:138..2930"
                     /db_xref="GeneID:133064560"
ORIGIN      
        1 mnyvgqlagq vfvtvkelyk glnpatlsgc idiivvrqpn gslqcspfhv rfgkmgvlrs
       61 rekvvdiein gesvdlhmkl gdngeaffvq etdndqevip thlatspils egasrmesql
      121 krnsadrirg ldanmsaqvs ppsetpssgs lvkkrrkrrr ksqldslkrd enmntseded
      181 mfpiemssde eaepldssrt lpddippfqe dvpkeshspv mtypqsasyp nsdrewspna
      241 slvdcrrppp hlvvaaeggl ssscppqssh fhasespsvs rpstpksdse lvsksadrtm
      301 qknnlemlwl wgelpqatks sphkmkessp lnsrkicdkm hfqaihsess dafsdqsptl
      361 araspvqpll eqnkpqteiq fvneddveal gaaapplpti eepkapsant apvaasktds
      421 psrkkdkrsr hlgadgvyld dltdmdpeva alyfpkngdp sgltkpasdn garsanqspq
      481 svgssgvdsg vestsdglrd lpsiaislcg glsdnreitk dafleqavsy qqfadnpali
      541 ddpnlvvkig nkyynwttaa plllamqafq kplpkatves imrdkmprkg grwwfswrgr
      601 nttikeeskp eqclagkshs tgeqpsqlgm atrikhesss sdeehaaakp sstshlplls
      661 svsykktlrl tseqlkslkl kngpndvvfs vttqyqgtcr cegtiylwnw ddkvvisdid
      721 gtitrsdtlg hilptlgkdw thqgiaklyh kvsqngykfl ycsaraigma dmtrgylhwv
      781 nergtvlpqg plllspsslf salhreviek kpekfkvqcl tdiknlffpn tepfyaafgn
      841 rpadvysykq vgvslnrift vnpkgelvqe haktnissyv rlcevvdhvf pllkrshssd
      901 fpcsdtfsnf tfwreppppf enqdvhsasa
//
LOCUS       XP_061010811             343 aa            linear   MAM 02-DEC-2023
DEFINITION  tribbles homolog 2 isoform X1 [Dama dama].
ACCESSION   XP_061010811
VERSION     XP_061010811.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154828.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..343
                     /product="tribbles homolog 2 isoform X1"
                     /calculated_mol_wt=38670
     Region          67..308
                     /region_name="PK_TRB2"
                     /note="Pseudokinase domain of Tribbles Homolog 2; cd14022"
                     /db_xref="CDD:270924"
     CDS             1..343
                     /gene="TRIB2"
                     /coded_by="XM_061154828.1:1087..2118"
                     /db_xref="GeneID:133064561"
ORIGIN      
        1 mnihrstpit iarygrsrnk tqdfeelssi rsaepsqsfs pnlgspsppe tpnlshcvsc
       61 igkylllepl egdhvfravh lhsgeelvck vfdiscyqes lapcfclsah sninqiteii
      121 lgetkayvff ersygdmhsf vrtckklree eaarlfyqia savahchdgg lvlrdlklrk
      181 fifkdeertr vklesleday ilrgdddsls dkhgcpayvs peilntngsy sgkaadvwsl
      241 gvmlytmlvg rypfhdieps slfskirrgq fnipetlspk akclirsilr repserltsq
      301 eildhpwfst dfsvsnsgyg akevsdqlvp dvnmeetldp ffn
//
LOCUS       XP_061010812             207 aa            linear   MAM 02-DEC-2023
DEFINITION  tribbles homolog 2 isoform X2 [Dama dama].
ACCESSION   XP_061010812
VERSION     XP_061010812.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154829.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..207
                     /product="tribbles homolog 2 isoform X2"
                     /calculated_mol_wt=23480
     Region          <1..172
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..207
                     /gene="TRIB2"
                     /coded_by="XM_061154829.1:224..847"
                     /db_xref="GeneID:133064561"
ORIGIN      
        1 mhsfvrtckk lreeeaarlf yqiasavahc hdgglvlrdl klrkfifkde ertrvklesl
       61 edayilrgdd dslsdkhgcp ayvspeilnt ngsysgkaad vwslgvmlyt mlvgrypfhd
      121 iepsslfski rrgqfnipet lspkakclir silrrepser ltsqeildhp wfstdfsvsn
      181 sgygakevsd qlvpdvnmee tldpffn
//
LOCUS       XP_061010813             293 aa            linear   MAM 02-DEC-2023
DEFINITION  protein LRATD1 [Dama dama].
ACCESSION   XP_061010813
VERSION     XP_061010813.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154830.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..293
                     /product="protein LRATD1"
                     /calculated_mol_wt=32325
     Region          145..225
                     /region_name="NLPC_P60"
                     /note="NlpC/P60 family; cl21534"
                     /db_xref="CDD:473902"
     CDS             1..293
                     /gene="LRATD1"
                     /coded_by="XM_061154830.1:251..1132"
                     /db_xref="GeneID:133064565"
ORIGIN      
        1 mgnqldrith lsyselptgd psgiekdelr vgvayffsde eedldergqp dkfgvkappg
       61 capcpespsr hhhhhhllhq lvlnetqfsa frgqecifsk vsggpqgadl svyavtalpa
      121 lcepgdllel lwlqpapepp apaphwavyv gggqiihlcq geirqdslye agaanvgrvv
      181 nswyryrplv aelvvqnacg hlglkseeic wtnsesfaaw crfgkrefka ggevpagtqp
      241 pqqqyclkvh ladnkvhtar fhsledlire krridasgrl rvlqeladlv dak
//
LOCUS       XP_061010814            2372 aa            linear   MAM 02-DEC-2023
DEFINITION  NBAS subunit of NRZ tethering complex [Dama dama].
ACCESSION   XP_061010814
VERSION     XP_061010814.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154831.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2372
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2372
                     /product="NBAS subunit of NRZ tethering complex"
                     /calculated_mol_wt=267949
     Region          90..371
                     /region_name="Nbas_N"
                     /note="Neuroblastoma-amplified sequence, N terminal;
                     pfam15492"
                     /db_xref="CDD:464746"
     Region          726..1370
                     /region_name="Sec39"
                     /note="Secretory pathway protein Sec39; pfam08314"
                     /db_xref="CDD:429913"
     CDS             1..2372
                     /gene="NBAS"
                     /coded_by="XM_061154831.1:41..7159"
                     /db_xref="GeneID:133064567"
ORIGIN      
        1 massepaptv ssgaaegeee tilydllvnt ewppetevqp rgnrkhgasf iitkairdrl
       61 lflsqyiwyr papfllpdgl vrlvnkqinw hlvlasngkl laavqdqcve irsakddfts
      121 iigkcqvpkd pkpqwrrvaw sydctllaya esmgtvrvfd lmgselfvit patslagdls
      181 yaiaglifle ykasaqwsae llvinyrgel rsylvsvgth qsyqeshcfs fsshyphgin
      241 taiyhpghrl llvggcetae vgiskaascg lsawrvlsgs pyykpvthgg drvtavpktl
      301 gllrmlsgkf ysrqgqeqdg ifkmslspdg tllaaihfsg klsiwaipsl kqqgewtqhe
      361 qpgyddlnpd wrlstekrkk ikdkesfypl idvnwwvdsa vilarcsgal tvssvktlkn
      421 llgkscewfe pspqvtathd ggflslecei klapkrsrle tragedeege edsdsdqeis
      481 aktryfgyik qglylvteme rfapprkrpr titknyrlvs lrsttpeely qrkieseeye
      541 ealslaqtyg ldtdlvyqrq wrksavnias iqnylskikk rswvlhecle rvpenvdaak
      601 ellqyglkgt dleallaigk gaddgrfilp gemdidnvsy eelsppeeep aekkkekelr
      661 krrellklvn fskltleqke lcrcrlkllt yldrlatyee ilgvphasgq rydaeffkkf
      721 rsqnivlsar tyaresnvqa leilftyhgs dllphrlail snfpettsph qysallpeac
      781 ydgdslmivp whehkhrded wceklecrtv vepslpdese flyaaqpalq ryrsarlava
      841 evmdwyrnra eeiehyarqv dcalslirlg mernipgllv lcdnlvtlea lvyeagcdlt
      901 ltlkelqqmk dieklrllmn scsedkyvts ayqwmvpflh rcekqspgva nellkeylvt
      961 lakgdlklpl kifqhskpdl qqkiipdqdq lmaialeciy scerndqlal cydileclpq
     1021 rgygqktevt talhdmvdql ehilsvseil ekhglekpis yvkntqssse earklmvrlt
     1081 rhtgrkqppv seshwrvllq dmltmqqnvy mcldsdacye iftesllcss rlenihlagq
     1141 mmhcsacsin pptsiahkgk tqyrvsyeks idlvlaasre yfnsstnltd tcmdlarccl
     1201 qlitdrpaai qeeldliqal gcleefgvki lplqvrlrsd riglikecic qsptcykqst
     1261 kllglaellr vagedpeerr gqvlvllveq alrfhdykaa nvhcqelmat gyskswdvcs
     1321 qlgqsegyqd latrqelmaf althcppssi elllaasssl kteilyqrvn fqihpegges
     1381 inmsplmska lqedevcvpg snsadlfhwt tattmkvlsn tttttkavlq avsdgqwwkk
     1441 sltylrplqg qefgggyqig traneglekq gchpfyesvi snpfvvesev tydtyqhipv
     1501 eslaevllrt gklaetkteg eevfpttevl lqlasdalpn dmtlalayll alpqvldank
     1561 cfekqshsal slqlaayyys lqiyaqlapc frdkchplyr adpkelikmv srhvalyghe
     1621 awpedlaalt kqlhyhnerl ldftqaqvlq glrkgvdvqr ftaddqykre tilglaetle
     1681 envysialsl aqrysvsrwe vfmthleflf tdsglstaei enraqslhlf etlktdpegf
     1741 hkhmvkyiyp tiggfdherl lyyftllesc gcsslgkyai kpethvqllk kfkvvasgld
     1801 ykkltdenmn plealepils sqnilsiskl vpkipgkdgc mlspsslyti wlqklfwtgd
     1861 phlvkqvpas ppewlhaydv cmkyfdrllp gdfitvvdav tfspkavtkl slearkemtg
     1921 kaikavkhfi ekprkrssee dteeaggsrv tyadalnhle qslahletld hsfiislkns
     1981 eqemlqkygy fydlsrseke kvynqalamc ldgqplrmiq qllevavgpl dilpkeivhs
     2041 avtkiisals ggsadlggpa dplhvlegvv aavhasvgeg eelvssedll ewlrpfcand
     2101 awpvrprihv lqvlgqsfhl teedgkllvf frteailkat wpqrqvdvad vedeekrcdl
     2161 ftelleashq evefqhlvll lqawppmkre ytvtnnpwvr latvmltrct tenkeglgne
     2221 vlkicrslyn teqmlpaegv kelclllldq alllpslkll lespderlha maldhitaia
     2281 kvndsncdqe llsllleakl lvkclstpfy prlvehllas pqpgrwdpee larqlweagh
     2341 eaeagsllla vrgthralrt fsmalgaaql wv
//
LOCUS       XP_061010816             778 aa            linear   MAM 02-DEC-2023
DEFINITION  ATP-dependent RNA helicase DDX1 isoform X1 [Dama dama].
ACCESSION   XP_061010816
VERSION     XP_061010816.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154833.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..778
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..778
                     /product="ATP-dependent RNA helicase DDX1 isoform X1"
                     /calculated_mol_wt=86296
     Region          43..>100
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            86..92
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350712"
     Region          131..283
                     /region_name="SPRY_DDX1"
                     /note="SPRY domain associated with DEAD box gene DDX1;
                     cd12873"
                     /db_xref="CDD:293933"
     Region          322..663
                     /region_name="SrmB"
                     /note="Superfamily II DNA and RNA helicase [Replication,
                     recombination and repair]; COG0513"
                     /db_xref="CDD:440279"
     Region          <696..758
                     /region_name="DUF5766"
                     /note="Family of unknown function (DUF5766); pfam19070"
                     /db_xref="CDD:408840"
     CDS             1..778
                     /gene="DDX1"
                     /coded_by="XM_061154833.1:150..2486"
                     /db_xref="GeneID:133064568"
ORIGIN      
        1 meggpavpai rvkpsqtiqs sppvecsqgn dpnsccieqk nqsemgvmpe iaqaveemdw
       61 llptdiqaes iplilgggdv lmaaetgsgk tgafsipviq ivyetlkdqq egkkgkatik
      121 tgasvlnkwq mnpydrgsaf aigadglccq srevkewhgc ratkgltkgk hyyevschdq
      181 glcrvgwssm qasldlgtdk fgfgfggtgk kshnkqfdny geeftmhdti gcyldidkgh
      241 vkfskngkdl glafeipphm knqalfpacv lknaelkfnf geeefkfppk dgfvalskap
      301 esfvvksqht gnaqvaqtkf lpnapkaliv epsrelaeqt lnnvkqfkky idnpklrell
      361 iiggvaardq lsvldngvdi vvgtpgrldd lvstgklnls qvrflvldea dgllsqgysd
      421 finrihnqip qitsdgkrlq vivcsatlhs fdvkklseki mhfptwvdlk gedsvpdtvh
      481 hvvvpvnpkt drlwerlgks hirtdevhak dntrpgansp emwseaikil kgeyavraik
      541 ehkmdqaiif crtkidcdnl eqyfmqqggg pdkkghqfsc vclhgdrkph erkqnlerfk
      601 kgdvrflict dvaargidih gvpyvinvtl pdekqnyvhr igrvgraerm glaislvate
      661 kekvwyhvcs srgkgcyntr lkedggctiw ynemqllsei eehlnctisq vepdikvpvd
      721 efdgkvtygq krtlgggnyk ghvdilaptv qelaalekea qtsflhlgyl pnqlfrtf
//
LOCUS       XP_061010817             740 aa            linear   MAM 02-DEC-2023
DEFINITION  ATP-dependent RNA helicase DDX1 isoform X2 [Dama dama].
ACCESSION   XP_061010817
VERSION     XP_061010817.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154834.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..740
                     /product="ATP-dependent RNA helicase DDX1 isoform X2"
                     /calculated_mol_wt=82308
     Region          4..>62
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            48..54
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     Region          93..245
                     /region_name="SPRY_DDX1"
                     /note="SPRY domain associated with DEAD box gene DDX1;
                     cd12873"
                     /db_xref="CDD:293933"
     Region          284..625
                     /region_name="SrmB"
                     /note="Superfamily II DNA and RNA helicase [Replication,
                     recombination and repair]; COG0513"
                     /db_xref="CDD:440279"
     Region          <658..720
                     /region_name="DUF5766"
                     /note="Family of unknown function (DUF5766); pfam19070"
                     /db_xref="CDD:408840"
     CDS             1..740
                     /gene="DDX1"
                     /coded_by="XM_061154834.1:98..2320"
                     /db_xref="GeneID:133064568"
ORIGIN      
        1 maafsemgvm peiaqaveem dwllptdiqa esiplilggg dvlmaaetgs gktgafsipv
       61 iqivyetlkd qqegkkgkat iktgasvlnk wqmnpydrgs afaigadglc cqsrevkewh
      121 gcratkgltk gkhyyevsch dqglcrvgws smqasldlgt dkfgfgfggt gkkshnkqfd
      181 nygeeftmhd tigcyldidk ghvkfskngk dlglafeipp hmknqalfpa cvlknaelkf
      241 nfgeeefkfp pkdgfvalsk apesfvvksq htgnaqvaqt kflpnapkal ivepsrelae
      301 qtlnnvkqfk kyidnpklre lliiggvaar dqlsvldngv divvgtpgrl ddlvstgkln
      361 lsqvrflvld eadgllsqgy sdfinrihnq ipqitsdgkr lqvivcsatl hsfdvkklse
      421 kimhfptwvd lkgedsvpdt vhhvvvpvnp ktdrlwerlg kshirtdevh akdntrpgan
      481 spemwseaik ilkgeyavra ikehkmdqai ifcrtkidcd nleqyfmqqg ggpdkkghqf
      541 scvclhgdrk pherkqnler fkkgdvrfli ctdvaargid ihgvpyvinv tlpdekqnyv
      601 hrigrvgrae rmglaislva tekekvwyhv cssrgkgcyn trlkedggct iwynemqlls
      661 eieehlncti sqvepdikvp vdefdgkvty gqkrtlgggn ykghvdilap tvqelaalek
      721 eaqtsflhlg ylpnqlfrtf
//
LOCUS       XP_061010818             323 aa            linear   MAM 02-DEC-2023
DEFINITION  CYFIP-related Rac1 interactor A [Dama dama].
ACCESSION   XP_061010818
VERSION     XP_061010818.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154835.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..323
                     /product="CYFIP-related Rac1 interactor A"
                     /calculated_mol_wt=37182
     Region          17..319
                     /region_name="CYRIA-B_Rac1-bd"
                     /note="CYRIA/CYRIB Rac1 binding domain; pfam07159"
                     /db_xref="CDD:462106"
     CDS             1..323
                     /gene="CYRIA"
                     /coded_by="XM_061154835.1:182..1153"
                     /db_xref="GeneID:133064569"
ORIGIN      
        1 mgnllkvltr eienyphffl dfenaqpteg ereiwnqisa vlqdsesila dlqaykgagp
       61 eirdaiqnpn diqlqekawn avcplvvrlk rfyefsirle kalqsllesl tcppytptqh
      121 lereqalake faeilhftlr fdelkmrnpa iqndfsyyrr tisrnrinnm hldienevnn
      181 emanrmslfy aeatpmlktl snatmhfvse nktlpientt dclstmtsvc kvmletpeyr
      241 srftseetlm fcmrvmvgvi ilydhvhpvg afcktskidm kgcikvlkeq apdsveglln
      301 alrfttkhln destskqira mlq
//
LOCUS       XP_061010819             323 aa            linear   MAM 02-DEC-2023
DEFINITION  CYFIP-related Rac1 interactor A [Dama dama].
ACCESSION   XP_061010819
VERSION     XP_061010819.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154836.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..323
                     /product="CYFIP-related Rac1 interactor A"
                     /calculated_mol_wt=37182
     Region          17..319
                     /region_name="CYRIA-B_Rac1-bd"
                     /note="CYRIA/CYRIB Rac1 binding domain; pfam07159"
                     /db_xref="CDD:462106"
     CDS             1..323
                     /gene="CYRIA"
                     /coded_by="XM_061154836.1:244..1215"
                     /db_xref="GeneID:133064569"
ORIGIN      
        1 mgnllkvltr eienyphffl dfenaqpteg ereiwnqisa vlqdsesila dlqaykgagp
       61 eirdaiqnpn diqlqekawn avcplvvrlk rfyefsirle kalqsllesl tcppytptqh
      121 lereqalake faeilhftlr fdelkmrnpa iqndfsyyrr tisrnrinnm hldienevnn
      181 emanrmslfy aeatpmlktl snatmhfvse nktlpientt dclstmtsvc kvmletpeyr
      241 srftseetlm fcmrvmvgvi ilydhvhpvg afcktskidm kgcikvlkeq apdsveglln
      301 alrfttkhln destskqira mlq
//
LOCUS       XP_061010820            1098 aa            linear   MAM 02-DEC-2023
DEFINITION  structural maintenance of chromosomes protein 6 [Dama dama].
ACCESSION   XP_061010820
VERSION     XP_061010820.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154837.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1098
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1098
                     /product="structural maintenance of chromosomes protein 6"
                     /calculated_mol_wt=127232
     Region          55..>211
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            83..90
                     /site_type="other"
                     /note="Walker A/P-loop"
                     /db_xref="CDD:213179"
     Site            195..198
                     /site_type="other"
                     /note="Q-loop/lid"
                     /db_xref="CDD:213179"
     Region          <222..1056
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <984..1082
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            994..1003
                     /site_type="other"
                     /note="ABC transporter signature motif"
                     /db_xref="CDD:213179"
     Site            1018..1023
                     /site_type="other"
                     /note="Walker B"
                     /db_xref="CDD:213179"
     Site            1026..1029
                     /site_type="other"
                     /note="D-loop"
                     /db_xref="CDD:213179"
     Site            1053..1059
                     /site_type="other"
                     /note="H-loop/switch region"
                     /db_xref="CDD:213179"
     CDS             1..1098
                     /gene="SMC6"
                     /coded_by="XM_061154837.1:190..3486"
                     /db_xref="GeneID:133064570"
ORIGIN      
        1 makrkeenff spenakrprq eelddfdkde cdedecavsf tngtstltaa evgiiesiql
       61 knfmchsmlg pfkfgsnvnf vvgnngsgks avltalivgl ggkavttnrg sslkgfvkdg
      121 qnsadisitl rnrgddayrg nvygdsivvq qhismdgsrs yklksatgav vstkkeelig
      181 ildhfniqvd npvsvltqem skqflqskne gdkykffmka tqleqmkedy syimetkert
      241 keqinqgeer lselkrqcle keerfqniag lstmktnley lkhemawavv neiekqlnai
      301 rdnikigedr aarlerktee qqvrlneaek kykdiqdkle kisqetsara pecmalkadl
      361 tskkraynea evlynrslne ykalkkddeq lckrieelrk sadqsleper lerqkkiswl
      421 kervkalqdq essvnqeieq fqqaiekdke ehtrikreel dvkttlnfnq rqlkelkdsk
      481 tdrlkrfgph vpalleaidd ayrrglftyk pvgplgacih lrdpelalai esclkgllqa
      541 ycchnhader vlqalmkkfy spgtsrpqii vsefrnemyd vrhraayhpe fptvltalei
      601 dnavvansli dmrsietvll iknnsvarav mqsqkppknc reaftadgdq vfagryysse
      661 ytrpkflsrd vdseisdlen evenkkaqil sllqhlstle kdikgneell rryqlhykel
      721 kmkirksise irelenieeh qsvdiatled eaqenkikmk mveknmeqqk enmehlkslk
      781 ieaenkydti kqkinqlsel adplkdelnl adsevdnqkr gkrhyedkqk ehldtlnkkk
      841 reldmkekel eekmsqarqi cperievkks asildkeinr lrqkiqaeha sygdreeimk
      901 qyqearesyl dldskvktlk rfiklleeim ihryktyqqf rrcltlrckl yfdnllsqra
      961 ycgkmnfdhk netltisvqp gegnkaafnd mralsggers fstvcfilsl wsiaespfrc
     1021 ldefdvymdm vnrriamdmi lkmadsqrfr qfilltpqsm sslpssklir ilrmsdperg
     1081 qttlpfrpvs qeeeedrs
//
LOCUS       XP_061010821             912 aa            linear   MAM 02-DEC-2023
DEFINITION  flap endonuclease GEN homolog 1 [Dama dama].
ACCESSION   XP_061010821
VERSION     XP_061010821.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154838.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..912
                     /product="flap endonuclease GEN homolog 1"
                     /calculated_mol_wt=102973
     Region          2..206
                     /region_name="PIN_GEN1"
                     /note="FEN-like PIN domains of Gap Endonuclease 1, a
                     structure-specific, divalent-metal-ion dependent, 5'
                     nuclease and homologs; cd09869"
                     /db_xref="CDD:350217"
     Site            order(16,30,37,54..55,58..59,75,134,136,155,157,170..171)
                     /site_type="active"
                     /db_xref="CDD:350217"
     Site            order(81..92,104..111)
                     /site_type="other"
                     /note="helical arch"
                     /db_xref="CDD:350217"
     Region          195..338
                     /region_name="H3TH_StructSpec-5'-nucleases"
                     /note="H3TH domains of structure-specific 5' nucleases (or
                     flap endonuclease-1-like) involved in DNA replication,
                     repair, and recombination; cl22433"
                     /db_xref="CDD:473957"
     Site            order(205..206,208,216..218,223)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:188616"
     Site            208
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:188616"
     Region          398..457
                     /region_name="Chromo_2"
                     /note="Chromatin organization modifier domain 2;
                     pfam18704"
                     /db_xref="CDD:465841"
     CDS             1..912
                     /gene="GEN1"
                     /coded_by="XM_061154838.1:1638..4376"
                     /db_xref="GeneID:133064571"
ORIGIN      
        1 mgvnglwqil epvkqhvhlh slsgktiavd lslwvceaqt vkkmigtvmk phlrnlffri
       61 sylmlmdvkl vfvmegepph lkadviskrn qirygpsgkt qsqktgrshf ktvlkecldm
      121 leclgipwvq aageaeamca ylnasgyvdg cltndgdafl ygaqtvyrnf tmntkdphvd
      181 cyamssitsk lglnrdalvg lavllgcdyl pkgvpgvgke qalklikilk gqsllqrfnq
      241 wsekscysns qpalvnklah csvcshpgss kdhehngckl cqtdryceph dyeyccpcew
      301 hrteherqln vveynikkka cscegfpfhe vtqefllnkd klvkavryqr pdlllfqrft
      361 lekmewpnhy aceklltllt hydmterklg rrnsdqlqpi rivknrirng vhcfeiewek
      421 pehyaienkh gelalqtiee eslfeaaype ivaiyqkqks enkekkqksm kikskgnilp
      481 esdemmnvqs lmtlkptwei fpkqksklsl eispdstspe efistslnvl llpedaaclt
      541 tqeqlisspr plamqqikdi tksltaessq pstsshnisa vadlhlstid wegtsfsnsp
      601 aiprntfthg lkseletaip dsfknnpeql cceserhtts vnklpcwdlq ktnpeedlls
      661 gisdlrlqdl plkeriliks ypqntvepdv dlktlslltv keqcvannts hcpshlskdl
      721 lgihwqnesr nckipkggql fqennksnts vplsvnnpgt ktskvrtgpp naalyhsrka
      781 gvqiaqktvm kksvcldrps sdeesvpefg kaksttqkmk qssqkhsptq fkkndaklsn
      841 pkayiketqq cvqayetagn eeacfpdesl sflryhkdkd dsgtcldspl plsqrlklrf
      901 qntlnlkysa mt
//
LOCUS       XP_061010822             912 aa            linear   MAM 02-DEC-2023
DEFINITION  flap endonuclease GEN homolog 1 [Dama dama].
ACCESSION   XP_061010822
VERSION     XP_061010822.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154839.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..912
                     /product="flap endonuclease GEN homolog 1"
                     /calculated_mol_wt=102973
     Region          2..206
                     /region_name="PIN_GEN1"
                     /note="FEN-like PIN domains of Gap Endonuclease 1, a
                     structure-specific, divalent-metal-ion dependent, 5'
                     nuclease and homologs; cd09869"
                     /db_xref="CDD:350217"
     Site            order(16,30,37,54..55,58..59,75,134,136,155,157,170..171)
                     /site_type="active"
                     /db_xref="CDD:350217"
     Site            order(81..92,104..111)
                     /site_type="other"
                     /note="helical arch"
                     /db_xref="CDD:350217"
     Region          195..338
                     /region_name="H3TH_StructSpec-5'-nucleases"
                     /note="H3TH domains of structure-specific 5' nucleases (or
                     flap endonuclease-1-like) involved in DNA replication,
                     repair, and recombination; cl22433"
                     /db_xref="CDD:473957"
     Site            order(205..206,208,216..218,223)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:188616"
     Site            208
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:188616"
     Region          398..457
                     /region_name="Chromo_2"
                     /note="Chromatin organization modifier domain 2;
                     pfam18704"
                     /db_xref="CDD:465841"
     CDS             1..912
                     /gene="GEN1"
                     /coded_by="XM_061154839.1:336..3074"
                     /db_xref="GeneID:133064571"
ORIGIN      
        1 mgvnglwqil epvkqhvhlh slsgktiavd lslwvceaqt vkkmigtvmk phlrnlffri
       61 sylmlmdvkl vfvmegepph lkadviskrn qirygpsgkt qsqktgrshf ktvlkecldm
      121 leclgipwvq aageaeamca ylnasgyvdg cltndgdafl ygaqtvyrnf tmntkdphvd
      181 cyamssitsk lglnrdalvg lavllgcdyl pkgvpgvgke qalklikilk gqsllqrfnq
      241 wsekscysns qpalvnklah csvcshpgss kdhehngckl cqtdryceph dyeyccpcew
      301 hrteherqln vveynikkka cscegfpfhe vtqefllnkd klvkavryqr pdlllfqrft
      361 lekmewpnhy aceklltllt hydmterklg rrnsdqlqpi rivknrirng vhcfeiewek
      421 pehyaienkh gelalqtiee eslfeaaype ivaiyqkqks enkekkqksm kikskgnilp
      481 esdemmnvqs lmtlkptwei fpkqksklsl eispdstspe efistslnvl llpedaaclt
      541 tqeqlisspr plamqqikdi tksltaessq pstsshnisa vadlhlstid wegtsfsnsp
      601 aiprntfthg lkseletaip dsfknnpeql cceserhtts vnklpcwdlq ktnpeedlls
      661 gisdlrlqdl plkeriliks ypqntvepdv dlktlslltv keqcvannts hcpshlskdl
      721 lgihwqnesr nckipkggql fqennksnts vplsvnnpgt ktskvrtgpp naalyhsrka
      781 gvqiaqktvm kksvcldrps sdeesvpefg kaksttqkmk qssqkhsptq fkkndaklsn
      841 pkayiketqq cvqayetagn eeacfpdesl sflryhkdkd dsgtcldspl plsqrlklrf
      901 qntlnlkysa mt
//
LOCUS       XP_061010823             912 aa            linear   MAM 02-DEC-2023
DEFINITION  flap endonuclease GEN homolog 1 [Dama dama].
ACCESSION   XP_061010823
VERSION     XP_061010823.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154840.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..912
                     /product="flap endonuclease GEN homolog 1"
                     /calculated_mol_wt=102973
     Region          2..206
                     /region_name="PIN_GEN1"
                     /note="FEN-like PIN domains of Gap Endonuclease 1, a
                     structure-specific, divalent-metal-ion dependent, 5'
                     nuclease and homologs; cd09869"
                     /db_xref="CDD:350217"
     Site            order(16,30,37,54..55,58..59,75,134,136,155,157,170..171)
                     /site_type="active"
                     /db_xref="CDD:350217"
     Site            order(81..92,104..111)
                     /site_type="other"
                     /note="helical arch"
                     /db_xref="CDD:350217"
     Region          195..338
                     /region_name="H3TH_StructSpec-5'-nucleases"
                     /note="H3TH domains of structure-specific 5' nucleases (or
                     flap endonuclease-1-like) involved in DNA replication,
                     repair, and recombination; cl22433"
                     /db_xref="CDD:473957"
     Site            order(205..206,208,216..218,223)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:188616"
     Site            208
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:188616"
     Region          398..457
                     /region_name="Chromo_2"
                     /note="Chromatin organization modifier domain 2;
                     pfam18704"
                     /db_xref="CDD:465841"
     CDS             1..912
                     /gene="GEN1"
                     /coded_by="XM_061154840.1:290..3028"
                     /db_xref="GeneID:133064571"
ORIGIN      
        1 mgvnglwqil epvkqhvhlh slsgktiavd lslwvceaqt vkkmigtvmk phlrnlffri
       61 sylmlmdvkl vfvmegepph lkadviskrn qirygpsgkt qsqktgrshf ktvlkecldm
      121 leclgipwvq aageaeamca ylnasgyvdg cltndgdafl ygaqtvyrnf tmntkdphvd
      181 cyamssitsk lglnrdalvg lavllgcdyl pkgvpgvgke qalklikilk gqsllqrfnq
      241 wsekscysns qpalvnklah csvcshpgss kdhehngckl cqtdryceph dyeyccpcew
      301 hrteherqln vveynikkka cscegfpfhe vtqefllnkd klvkavryqr pdlllfqrft
      361 lekmewpnhy aceklltllt hydmterklg rrnsdqlqpi rivknrirng vhcfeiewek
      421 pehyaienkh gelalqtiee eslfeaaype ivaiyqkqks enkekkqksm kikskgnilp
      481 esdemmnvqs lmtlkptwei fpkqksklsl eispdstspe efistslnvl llpedaaclt
      541 tqeqlisspr plamqqikdi tksltaessq pstsshnisa vadlhlstid wegtsfsnsp
      601 aiprntfthg lkseletaip dsfknnpeql cceserhtts vnklpcwdlq ktnpeedlls
      661 gisdlrlqdl plkeriliks ypqntvepdv dlktlslltv keqcvannts hcpshlskdl
      721 lgihwqnesr nckipkggql fqennksnts vplsvnnpgt ktskvrtgpp naalyhsrka
      781 gvqiaqktvm kksvcldrps sdeesvpefg kaksttqkmk qssqkhsptq fkkndaklsn
      841 pkayiketqq cvqayetagn eeacfpdesl sflryhkdkd dsgtcldspl plsqrlklrf
      901 qntlnlkysa mt
//
LOCUS       XP_061010824             912 aa            linear   MAM 02-DEC-2023
DEFINITION  flap endonuclease GEN homolog 1 [Dama dama].
ACCESSION   XP_061010824
VERSION     XP_061010824.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154841.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..912
                     /product="flap endonuclease GEN homolog 1"
                     /calculated_mol_wt=102973
     Region          2..206
                     /region_name="PIN_GEN1"
                     /note="FEN-like PIN domains of Gap Endonuclease 1, a
                     structure-specific, divalent-metal-ion dependent, 5'
                     nuclease and homologs; cd09869"
                     /db_xref="CDD:350217"
     Site            order(16,30,37,54..55,58..59,75,134,136,155,157,170..171)
                     /site_type="active"
                     /db_xref="CDD:350217"
     Site            order(81..92,104..111)
                     /site_type="other"
                     /note="helical arch"
                     /db_xref="CDD:350217"
     Region          195..338
                     /region_name="H3TH_StructSpec-5'-nucleases"
                     /note="H3TH domains of structure-specific 5' nucleases (or
                     flap endonuclease-1-like) involved in DNA replication,
                     repair, and recombination; cl22433"
                     /db_xref="CDD:473957"
     Site            order(205..206,208,216..218,223)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:188616"
     Site            208
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:188616"
     Region          398..457
                     /region_name="Chromo_2"
                     /note="Chromatin organization modifier domain 2;
                     pfam18704"
                     /db_xref="CDD:465841"
     CDS             1..912
                     /gene="GEN1"
                     /coded_by="XM_061154841.1:1635..4373"
                     /db_xref="GeneID:133064571"
ORIGIN      
        1 mgvnglwqil epvkqhvhlh slsgktiavd lslwvceaqt vkkmigtvmk phlrnlffri
       61 sylmlmdvkl vfvmegepph lkadviskrn qirygpsgkt qsqktgrshf ktvlkecldm
      121 leclgipwvq aageaeamca ylnasgyvdg cltndgdafl ygaqtvyrnf tmntkdphvd
      181 cyamssitsk lglnrdalvg lavllgcdyl pkgvpgvgke qalklikilk gqsllqrfnq
      241 wsekscysns qpalvnklah csvcshpgss kdhehngckl cqtdryceph dyeyccpcew
      301 hrteherqln vveynikkka cscegfpfhe vtqefllnkd klvkavryqr pdlllfqrft
      361 lekmewpnhy aceklltllt hydmterklg rrnsdqlqpi rivknrirng vhcfeiewek
      421 pehyaienkh gelalqtiee eslfeaaype ivaiyqkqks enkekkqksm kikskgnilp
      481 esdemmnvqs lmtlkptwei fpkqksklsl eispdstspe efistslnvl llpedaaclt
      541 tqeqlisspr plamqqikdi tksltaessq pstsshnisa vadlhlstid wegtsfsnsp
      601 aiprntfthg lkseletaip dsfknnpeql cceserhtts vnklpcwdlq ktnpeedlls
      661 gisdlrlqdl plkeriliks ypqntvepdv dlktlslltv keqcvannts hcpshlskdl
      721 lgihwqnesr nckipkggql fqennksnts vplsvnnpgt ktskvrtgpp naalyhsrka
      781 gvqiaqktvm kksvcldrps sdeesvpefg kaksttqkmk qssqkhsptq fkkndaklsn
      841 pkayiketqq cvqayetagn eeacfpdesl sflryhkdkd dsgtcldspl plsqrlklrf
      901 qntlnlkysa mt
//
LOCUS       XP_061010825             912 aa            linear   MAM 02-DEC-2023
DEFINITION  flap endonuclease GEN homolog 1 [Dama dama].
ACCESSION   XP_061010825
VERSION     XP_061010825.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154842.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..912
                     /product="flap endonuclease GEN homolog 1"
                     /calculated_mol_wt=102973
     Region          2..206
                     /region_name="PIN_GEN1"
                     /note="FEN-like PIN domains of Gap Endonuclease 1, a
                     structure-specific, divalent-metal-ion dependent, 5'
                     nuclease and homologs; cd09869"
                     /db_xref="CDD:350217"
     Site            order(16,30,37,54..55,58..59,75,134,136,155,157,170..171)
                     /site_type="active"
                     /db_xref="CDD:350217"
     Site            order(81..92,104..111)
                     /site_type="other"
                     /note="helical arch"
                     /db_xref="CDD:350217"
     Region          195..338
                     /region_name="H3TH_StructSpec-5'-nucleases"
                     /note="H3TH domains of structure-specific 5' nucleases (or
                     flap endonuclease-1-like) involved in DNA replication,
                     repair, and recombination; cl22433"
                     /db_xref="CDD:473957"
     Site            order(205..206,208,216..218,223)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:188616"
     Site            208
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:188616"
     Region          398..457
                     /region_name="Chromo_2"
                     /note="Chromatin organization modifier domain 2;
                     pfam18704"
                     /db_xref="CDD:465841"
     CDS             1..912
                     /gene="GEN1"
                     /coded_by="XM_061154842.1:229..2967"
                     /db_xref="GeneID:133064571"
ORIGIN      
        1 mgvnglwqil epvkqhvhlh slsgktiavd lslwvceaqt vkkmigtvmk phlrnlffri
       61 sylmlmdvkl vfvmegepph lkadviskrn qirygpsgkt qsqktgrshf ktvlkecldm
      121 leclgipwvq aageaeamca ylnasgyvdg cltndgdafl ygaqtvyrnf tmntkdphvd
      181 cyamssitsk lglnrdalvg lavllgcdyl pkgvpgvgke qalklikilk gqsllqrfnq
      241 wsekscysns qpalvnklah csvcshpgss kdhehngckl cqtdryceph dyeyccpcew
      301 hrteherqln vveynikkka cscegfpfhe vtqefllnkd klvkavryqr pdlllfqrft
      361 lekmewpnhy aceklltllt hydmterklg rrnsdqlqpi rivknrirng vhcfeiewek
      421 pehyaienkh gelalqtiee eslfeaaype ivaiyqkqks enkekkqksm kikskgnilp
      481 esdemmnvqs lmtlkptwei fpkqksklsl eispdstspe efistslnvl llpedaaclt
      541 tqeqlisspr plamqqikdi tksltaessq pstsshnisa vadlhlstid wegtsfsnsp
      601 aiprntfthg lkseletaip dsfknnpeql cceserhtts vnklpcwdlq ktnpeedlls
      661 gisdlrlqdl plkeriliks ypqntvepdv dlktlslltv keqcvannts hcpshlskdl
      721 lgihwqnesr nckipkggql fqennksnts vplsvnnpgt ktskvrtgpp naalyhsrka
      781 gvqiaqktvm kksvcldrps sdeesvpefg kaksttqkmk qssqkhsptq fkkndaklsn
      841 pkayiketqq cvqayetagn eeacfpdesl sflryhkdkd dsgtcldspl plsqrlklrf
      901 qntlnlkysa mt
//
LOCUS       XP_061010826             912 aa            linear   MAM 02-DEC-2023
DEFINITION  flap endonuclease GEN homolog 1 [Dama dama].
ACCESSION   XP_061010826
VERSION     XP_061010826.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154843.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..912
                     /product="flap endonuclease GEN homolog 1"
                     /calculated_mol_wt=102973
     Region          2..206
                     /region_name="PIN_GEN1"
                     /note="FEN-like PIN domains of Gap Endonuclease 1, a
                     structure-specific, divalent-metal-ion dependent, 5'
                     nuclease and homologs; cd09869"
                     /db_xref="CDD:350217"
     Site            order(16,30,37,54..55,58..59,75,134,136,155,157,170..171)
                     /site_type="active"
                     /db_xref="CDD:350217"
     Site            order(81..92,104..111)
                     /site_type="other"
                     /note="helical arch"
                     /db_xref="CDD:350217"
     Region          195..338
                     /region_name="H3TH_StructSpec-5'-nucleases"
                     /note="H3TH domains of structure-specific 5' nucleases (or
                     flap endonuclease-1-like) involved in DNA replication,
                     repair, and recombination; cl22433"
                     /db_xref="CDD:473957"
     Site            order(205..206,208,216..218,223)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:188616"
     Site            208
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:188616"
     Region          398..457
                     /region_name="Chromo_2"
                     /note="Chromatin organization modifier domain 2;
                     pfam18704"
                     /db_xref="CDD:465841"
     CDS             1..912
                     /gene="GEN1"
                     /coded_by="XM_061154843.1:372..3110"
                     /db_xref="GeneID:133064571"
ORIGIN      
        1 mgvnglwqil epvkqhvhlh slsgktiavd lslwvceaqt vkkmigtvmk phlrnlffri
       61 sylmlmdvkl vfvmegepph lkadviskrn qirygpsgkt qsqktgrshf ktvlkecldm
      121 leclgipwvq aageaeamca ylnasgyvdg cltndgdafl ygaqtvyrnf tmntkdphvd
      181 cyamssitsk lglnrdalvg lavllgcdyl pkgvpgvgke qalklikilk gqsllqrfnq
      241 wsekscysns qpalvnklah csvcshpgss kdhehngckl cqtdryceph dyeyccpcew
      301 hrteherqln vveynikkka cscegfpfhe vtqefllnkd klvkavryqr pdlllfqrft
      361 lekmewpnhy aceklltllt hydmterklg rrnsdqlqpi rivknrirng vhcfeiewek
      421 pehyaienkh gelalqtiee eslfeaaype ivaiyqkqks enkekkqksm kikskgnilp
      481 esdemmnvqs lmtlkptwei fpkqksklsl eispdstspe efistslnvl llpedaaclt
      541 tqeqlisspr plamqqikdi tksltaessq pstsshnisa vadlhlstid wegtsfsnsp
      601 aiprntfthg lkseletaip dsfknnpeql cceserhtts vnklpcwdlq ktnpeedlls
      661 gisdlrlqdl plkeriliks ypqntvepdv dlktlslltv keqcvannts hcpshlskdl
      721 lgihwqnesr nckipkggql fqennksnts vplsvnnpgt ktskvrtgpp naalyhsrka
      781 gvqiaqktvm kksvcldrps sdeesvpefg kaksttqkmk qssqkhsptq fkkndaklsn
      841 pkayiketqq cvqayetagn eeacfpdesl sflryhkdkd dsgtcldspl plsqrlklrf
      901 qntlnlkysa mt
//
LOCUS       XP_061010827             912 aa            linear   MAM 02-DEC-2023
DEFINITION  flap endonuclease GEN homolog 1 [Dama dama].
ACCESSION   XP_061010827
VERSION     XP_061010827.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154844.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..912
                     /product="flap endonuclease GEN homolog 1"
                     /calculated_mol_wt=102973
     Region          2..206
                     /region_name="PIN_GEN1"
                     /note="FEN-like PIN domains of Gap Endonuclease 1, a
                     structure-specific, divalent-metal-ion dependent, 5'
                     nuclease and homologs; cd09869"
                     /db_xref="CDD:350217"
     Site            order(16,30,37,54..55,58..59,75,134,136,155,157,170..171)
                     /site_type="active"
                     /db_xref="CDD:350217"
     Site            order(81..92,104..111)
                     /site_type="other"
                     /note="helical arch"
                     /db_xref="CDD:350217"
     Region          195..338
                     /region_name="H3TH_StructSpec-5'-nucleases"
                     /note="H3TH domains of structure-specific 5' nucleases (or
                     flap endonuclease-1-like) involved in DNA replication,
                     repair, and recombination; cl22433"
                     /db_xref="CDD:473957"
     Site            order(205..206,208,216..218,223)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:188616"
     Site            208
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:188616"
     Region          398..457
                     /region_name="Chromo_2"
                     /note="Chromatin organization modifier domain 2;
                     pfam18704"
                     /db_xref="CDD:465841"
     CDS             1..912
                     /gene="GEN1"
                     /coded_by="XM_061154844.1:95..2833"
                     /db_xref="GeneID:133064571"
ORIGIN      
        1 mgvnglwqil epvkqhvhlh slsgktiavd lslwvceaqt vkkmigtvmk phlrnlffri
       61 sylmlmdvkl vfvmegepph lkadviskrn qirygpsgkt qsqktgrshf ktvlkecldm
      121 leclgipwvq aageaeamca ylnasgyvdg cltndgdafl ygaqtvyrnf tmntkdphvd
      181 cyamssitsk lglnrdalvg lavllgcdyl pkgvpgvgke qalklikilk gqsllqrfnq
      241 wsekscysns qpalvnklah csvcshpgss kdhehngckl cqtdryceph dyeyccpcew
      301 hrteherqln vveynikkka cscegfpfhe vtqefllnkd klvkavryqr pdlllfqrft
      361 lekmewpnhy aceklltllt hydmterklg rrnsdqlqpi rivknrirng vhcfeiewek
      421 pehyaienkh gelalqtiee eslfeaaype ivaiyqkqks enkekkqksm kikskgnilp
      481 esdemmnvqs lmtlkptwei fpkqksklsl eispdstspe efistslnvl llpedaaclt
      541 tqeqlisspr plamqqikdi tksltaessq pstsshnisa vadlhlstid wegtsfsnsp
      601 aiprntfthg lkseletaip dsfknnpeql cceserhtts vnklpcwdlq ktnpeedlls
      661 gisdlrlqdl plkeriliks ypqntvepdv dlktlslltv keqcvannts hcpshlskdl
      721 lgihwqnesr nckipkggql fqennksnts vplsvnnpgt ktskvrtgpp naalyhsrka
      781 gvqiaqktvm kksvcldrps sdeesvpefg kaksttqkmk qssqkhsptq fkkndaklsn
      841 pkayiketqq cvqayetagn eeacfpdesl sflryhkdkd dsgtcldspl plsqrlklrf
      901 qntlnlkysa mt
//
LOCUS       XP_061010828             912 aa            linear   MAM 02-DEC-2023
DEFINITION  flap endonuclease GEN homolog 1 [Dama dama].
ACCESSION   XP_061010828
VERSION     XP_061010828.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154845.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..912
                     /product="flap endonuclease GEN homolog 1"
                     /calculated_mol_wt=102973
     Region          2..206
                     /region_name="PIN_GEN1"
                     /note="FEN-like PIN domains of Gap Endonuclease 1, a
                     structure-specific, divalent-metal-ion dependent, 5'
                     nuclease and homologs; cd09869"
                     /db_xref="CDD:350217"
     Site            order(16,30,37,54..55,58..59,75,134,136,155,157,170..171)
                     /site_type="active"
                     /db_xref="CDD:350217"
     Site            order(81..92,104..111)
                     /site_type="other"
                     /note="helical arch"
                     /db_xref="CDD:350217"
     Region          195..338
                     /region_name="H3TH_StructSpec-5'-nucleases"
                     /note="H3TH domains of structure-specific 5' nucleases (or
                     flap endonuclease-1-like) involved in DNA replication,
                     repair, and recombination; cl22433"
                     /db_xref="CDD:473957"
     Site            order(205..206,208,216..218,223)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:188616"
     Site            208
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:188616"
     Region          398..457
                     /region_name="Chromo_2"
                     /note="Chromatin organization modifier domain 2;
                     pfam18704"
                     /db_xref="CDD:465841"
     CDS             1..912
                     /gene="GEN1"
                     /coded_by="XM_061154845.1:287..3025"
                     /db_xref="GeneID:133064571"
ORIGIN      
        1 mgvnglwqil epvkqhvhlh slsgktiavd lslwvceaqt vkkmigtvmk phlrnlffri
       61 sylmlmdvkl vfvmegepph lkadviskrn qirygpsgkt qsqktgrshf ktvlkecldm
      121 leclgipwvq aageaeamca ylnasgyvdg cltndgdafl ygaqtvyrnf tmntkdphvd
      181 cyamssitsk lglnrdalvg lavllgcdyl pkgvpgvgke qalklikilk gqsllqrfnq
      241 wsekscysns qpalvnklah csvcshpgss kdhehngckl cqtdryceph dyeyccpcew
      301 hrteherqln vveynikkka cscegfpfhe vtqefllnkd klvkavryqr pdlllfqrft
      361 lekmewpnhy aceklltllt hydmterklg rrnsdqlqpi rivknrirng vhcfeiewek
      421 pehyaienkh gelalqtiee eslfeaaype ivaiyqkqks enkekkqksm kikskgnilp
      481 esdemmnvqs lmtlkptwei fpkqksklsl eispdstspe efistslnvl llpedaaclt
      541 tqeqlisspr plamqqikdi tksltaessq pstsshnisa vadlhlstid wegtsfsnsp
      601 aiprntfthg lkseletaip dsfknnpeql cceserhtts vnklpcwdlq ktnpeedlls
      661 gisdlrlqdl plkeriliks ypqntvepdv dlktlslltv keqcvannts hcpshlskdl
      721 lgihwqnesr nckipkggql fqennksnts vplsvnnpgt ktskvrtgpp naalyhsrka
      781 gvqiaqktvm kksvcldrps sdeesvpefg kaksttqkmk qssqkhsptq fkkndaklsn
      841 pkayiketqq cvqayetagn eeacfpdesl sflryhkdkd dsgtcldspl plsqrlklrf
      901 qntlnlkysa mt
//
LOCUS       XP_061010830             912 aa            linear   MAM 02-DEC-2023
DEFINITION  flap endonuclease GEN homolog 1 [Dama dama].
ACCESSION   XP_061010830
VERSION     XP_061010830.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154847.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..912
                     /product="flap endonuclease GEN homolog 1"
                     /calculated_mol_wt=102973
     Region          2..206
                     /region_name="PIN_GEN1"
                     /note="FEN-like PIN domains of Gap Endonuclease 1, a
                     structure-specific, divalent-metal-ion dependent, 5'
                     nuclease and homologs; cd09869"
                     /db_xref="CDD:350217"
     Site            order(16,30,37,54..55,58..59,75,134,136,155,157,170..171)
                     /site_type="active"
                     /db_xref="CDD:350217"
     Site            order(81..92,104..111)
                     /site_type="other"
                     /note="helical arch"
                     /db_xref="CDD:350217"
     Region          195..338
                     /region_name="H3TH_StructSpec-5'-nucleases"
                     /note="H3TH domains of structure-specific 5' nucleases (or
                     flap endonuclease-1-like) involved in DNA replication,
                     repair, and recombination; cl22433"
                     /db_xref="CDD:473957"
     Site            order(205..206,208,216..218,223)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:188616"
     Site            208
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:188616"
     Region          398..457
                     /region_name="Chromo_2"
                     /note="Chromatin organization modifier domain 2;
                     pfam18704"
                     /db_xref="CDD:465841"
     CDS             1..912
                     /gene="GEN1"
                     /coded_by="XM_061154847.1:226..2964"
                     /db_xref="GeneID:133064571"
ORIGIN      
        1 mgvnglwqil epvkqhvhlh slsgktiavd lslwvceaqt vkkmigtvmk phlrnlffri
       61 sylmlmdvkl vfvmegepph lkadviskrn qirygpsgkt qsqktgrshf ktvlkecldm
      121 leclgipwvq aageaeamca ylnasgyvdg cltndgdafl ygaqtvyrnf tmntkdphvd
      181 cyamssitsk lglnrdalvg lavllgcdyl pkgvpgvgke qalklikilk gqsllqrfnq
      241 wsekscysns qpalvnklah csvcshpgss kdhehngckl cqtdryceph dyeyccpcew
      301 hrteherqln vveynikkka cscegfpfhe vtqefllnkd klvkavryqr pdlllfqrft
      361 lekmewpnhy aceklltllt hydmterklg rrnsdqlqpi rivknrirng vhcfeiewek
      421 pehyaienkh gelalqtiee eslfeaaype ivaiyqkqks enkekkqksm kikskgnilp
      481 esdemmnvqs lmtlkptwei fpkqksklsl eispdstspe efistslnvl llpedaaclt
      541 tqeqlisspr plamqqikdi tksltaessq pstsshnisa vadlhlstid wegtsfsnsp
      601 aiprntfthg lkseletaip dsfknnpeql cceserhtts vnklpcwdlq ktnpeedlls
      661 gisdlrlqdl plkeriliks ypqntvepdv dlktlslltv keqcvannts hcpshlskdl
      721 lgihwqnesr nckipkggql fqennksnts vplsvnnpgt ktskvrtgpp naalyhsrka
      781 gvqiaqktvm kksvcldrps sdeesvpefg kaksttqkmk qssqkhsptq fkkndaklsn
      841 pkayiketqq cvqayetagn eeacfpdesl sflryhkdkd dsgtcldspl plsqrlklrf
      901 qntlnlkysa mt
//
LOCUS       XP_061010831             491 aa            linear   MAM 02-DEC-2023
DEFINITION  potassium voltage-gated channel subfamily S member 3 [Dama dama].
ACCESSION   XP_061010831
VERSION     XP_061010831.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154848.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..491
                     /product="potassium voltage-gated channel subfamily S
                     member 3"
                     /calculated_mol_wt=55927
     Region          15..122
                     /region_name="BTB_POZ_KCNS3"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in potassium
                     voltage-gated channel subfamily S member 3 (KCNS3);
                     cd18428"
                     /db_xref="CDD:349735"
     Site            order(20,22..29,32,68,70..71,74,77,81,84,87,89,97..98,101)
                     /site_type="other"
                     /note="putative tetramer interface [polypeptide binding]"
                     /db_xref="CDD:349735"
     Region          184..417
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     CDS             1..491
                     /gene="KCNS3"
                     /coded_by="XM_061154848.1:435..1910"
                     /db_xref="GeneID:133064573"
ORIGIN      
        1 mvfgeffhrp gpdeelvnln vggfkqtvdq stllrfphtr lgkllschse eailelcddy
       61 svadkeyyfd rnpslfryvl nfyytgklhv meelcvfsfc qeieywgine lfldsccsnr
      121 yqerkeenhe kdwdqksndv stdssfeess lfekelekfd klrfgqlrkk iwirmenpay
      181 clsakliais slsvvlasiv amcihsmsef qnedgevddp vlegveiaci awftgelair
      241 lvtapcqkkf wknplniidf vsivpfyatl avdtkeeese dienmgkvvq ilrlmrifri
      301 lklarhsvgl rslgatlrhs yhevgllllf lsvgisifsv liysvekddh tssltsipvc
      361 wwwatismtt vgygdthpvt lvgkliastc iicgilvval pitiifnkfs kyyqkqkdid
      421 vdqcsedppe kcqelpyfni rdiyaqrmha fitslssvgi vvsdpdstda ssiednedvy
      481 ntaslencpp t
//
LOCUS       XP_061010832             491 aa            linear   MAM 02-DEC-2023
DEFINITION  potassium voltage-gated channel subfamily S member 3 [Dama dama].
ACCESSION   XP_061010832
VERSION     XP_061010832.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154849.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..491
                     /product="potassium voltage-gated channel subfamily S
                     member 3"
                     /calculated_mol_wt=55927
     Region          15..122
                     /region_name="BTB_POZ_KCNS3"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in potassium
                     voltage-gated channel subfamily S member 3 (KCNS3);
                     cd18428"
                     /db_xref="CDD:349735"
     Site            order(20,22..29,32,68,70..71,74,77,81,84,87,89,97..98,101)
                     /site_type="other"
                     /note="putative tetramer interface [polypeptide binding]"
                     /db_xref="CDD:349735"
     Region          184..417
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     CDS             1..491
                     /gene="KCNS3"
                     /coded_by="XM_061154849.1:501..1976"
                     /db_xref="GeneID:133064573"
ORIGIN      
        1 mvfgeffhrp gpdeelvnln vggfkqtvdq stllrfphtr lgkllschse eailelcddy
       61 svadkeyyfd rnpslfryvl nfyytgklhv meelcvfsfc qeieywgine lfldsccsnr
      121 yqerkeenhe kdwdqksndv stdssfeess lfekelekfd klrfgqlrkk iwirmenpay
      181 clsakliais slsvvlasiv amcihsmsef qnedgevddp vlegveiaci awftgelair
      241 lvtapcqkkf wknplniidf vsivpfyatl avdtkeeese dienmgkvvq ilrlmrifri
      301 lklarhsvgl rslgatlrhs yhevgllllf lsvgisifsv liysvekddh tssltsipvc
      361 wwwatismtt vgygdthpvt lvgkliastc iicgilvval pitiifnkfs kyyqkqkdid
      421 vdqcsedppe kcqelpyfni rdiyaqrmha fitslssvgi vvsdpdstda ssiednedvy
      481 ntaslencpp t
//
LOCUS       XP_061010833             491 aa            linear   MAM 02-DEC-2023
DEFINITION  potassium voltage-gated channel subfamily S member 3 [Dama dama].
ACCESSION   XP_061010833
VERSION     XP_061010833.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154850.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..491
                     /product="potassium voltage-gated channel subfamily S
                     member 3"
                     /calculated_mol_wt=55927
     Region          15..122
                     /region_name="BTB_POZ_KCNS3"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in potassium
                     voltage-gated channel subfamily S member 3 (KCNS3);
                     cd18428"
                     /db_xref="CDD:349735"
     Site            order(20,22..29,32,68,70..71,74,77,81,84,87,89,97..98,101)
                     /site_type="other"
                     /note="putative tetramer interface [polypeptide binding]"
                     /db_xref="CDD:349735"
     Region          184..417
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     CDS             1..491
                     /gene="KCNS3"
                     /coded_by="XM_061154850.1:360..1835"
                     /db_xref="GeneID:133064573"
ORIGIN      
        1 mvfgeffhrp gpdeelvnln vggfkqtvdq stllrfphtr lgkllschse eailelcddy
       61 svadkeyyfd rnpslfryvl nfyytgklhv meelcvfsfc qeieywgine lfldsccsnr
      121 yqerkeenhe kdwdqksndv stdssfeess lfekelekfd klrfgqlrkk iwirmenpay
      181 clsakliais slsvvlasiv amcihsmsef qnedgevddp vlegveiaci awftgelair
      241 lvtapcqkkf wknplniidf vsivpfyatl avdtkeeese dienmgkvvq ilrlmrifri
      301 lklarhsvgl rslgatlrhs yhevgllllf lsvgisifsv liysvekddh tssltsipvc
      361 wwwatismtt vgygdthpvt lvgkliastc iicgilvval pitiifnkfs kyyqkqkdid
      421 vdqcsedppe kcqelpyfni rdiyaqrmha fitslssvgi vvsdpdstda ssiednedvy
      481 ntaslencpp t
//
LOCUS       XP_061010834             491 aa            linear   MAM 02-DEC-2023
DEFINITION  potassium voltage-gated channel subfamily S member 3 [Dama dama].
ACCESSION   XP_061010834
VERSION     XP_061010834.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154851.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..491
                     /product="potassium voltage-gated channel subfamily S
                     member 3"
                     /calculated_mol_wt=55927
     Region          15..122
                     /region_name="BTB_POZ_KCNS3"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in potassium
                     voltage-gated channel subfamily S member 3 (KCNS3);
                     cd18428"
                     /db_xref="CDD:349735"
     Site            order(20,22..29,32,68,70..71,74,77,81,84,87,89,97..98,101)
                     /site_type="other"
                     /note="putative tetramer interface [polypeptide binding]"
                     /db_xref="CDD:349735"
     Region          184..417
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     CDS             1..491
                     /gene="KCNS3"
                     /coded_by="XM_061154851.1:359..1834"
                     /db_xref="GeneID:133064573"
ORIGIN      
        1 mvfgeffhrp gpdeelvnln vggfkqtvdq stllrfphtr lgkllschse eailelcddy
       61 svadkeyyfd rnpslfryvl nfyytgklhv meelcvfsfc qeieywgine lfldsccsnr
      121 yqerkeenhe kdwdqksndv stdssfeess lfekelekfd klrfgqlrkk iwirmenpay
      181 clsakliais slsvvlasiv amcihsmsef qnedgevddp vlegveiaci awftgelair
      241 lvtapcqkkf wknplniidf vsivpfyatl avdtkeeese dienmgkvvq ilrlmrifri
      301 lklarhsvgl rslgatlrhs yhevgllllf lsvgisifsv liysvekddh tssltsipvc
      361 wwwatismtt vgygdthpvt lvgkliastc iicgilvval pitiifnkfs kyyqkqkdid
      421 vdqcsedppe kcqelpyfni rdiyaqrmha fitslssvgi vvsdpdstda ssiednedvy
      481 ntaslencpp t
//
LOCUS       XP_061010835             564 aa            linear   MAM 02-DEC-2023
DEFINITION  cytosolic 5'-nucleotidase 1B [Dama dama].
ACCESSION   XP_061010835
VERSION     XP_061010835.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154852.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..564
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..564
                     /product="cytosolic 5'-nucleotidase 1B"
                     /calculated_mol_wt=63751
     Region          291..562
                     /region_name="5-nucleotidase"
                     /note="5'-nucleotidase; pfam06189"
                     /db_xref="CDD:461846"
     CDS             1..564
                     /gene="NT5C1B"
                     /coded_by="XM_061154852.1:1..1695"
                     /db_xref="GeneID:133064574"
ORIGIN      
        1 msqtslkqkk knetgsrysk dslegdksrk dseksvrltt qgsqeltlpk sdsrgyvvrn
       61 qwsrtsrsps trppsaeesr skntslklpn ssttsrtsst spsqrespkp lsaqpspptq
      121 nmpldsrssm spetqlqtts rrttksenpd twshstgrei resrdkresr dtrdmsrsrd
      181 shdsrdthqr eysrtppsew ksytqrrmly psqmdhdcvs dlarkreeee dedeaywasv
      241 rtlyektpnc srprppkpkh aitvavssga lfnmmdsrki ydeeglekym eyqltnenvv
      301 ltpgpafrfv kalqyvncrl relypdeqdl fdivlmtnnh aqvgvrlins vnhygllidr
      361 fcltggkspi gylkayltnl yvsadsekvl eaiqegiasa tmydgakdta ycdtqlrvvf
      421 dgdavlfsee pehgikdhgl dkcfqheala dnkplgqgpl kgfmedlgrl qkkfyakder
      481 lccpirtylv tarsaassga rvlktlrrwg leidealfla gapkgpilak irphlffddh
      541 mfhvegaqkf gtatahtpyg ispk
//
LOCUS       XP_061010836             336 aa            linear   MAM 02-DEC-2023
DEFINITION  retinol dehydrogenase 14 [Dama dama].
ACCESSION   XP_061010836
VERSION     XP_061010836.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154853.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..336
                     /product="retinol dehydrogenase 14"
                     /calculated_mol_wt=36511
     Region          43..328
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(50,52..53,55,74..76,142..144,196..198,217,221,
                     247..250)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:212495"
     Site            order(164,198,217,221)
                     /site_type="active"
                     /db_xref="CDD:212495"
     CDS             1..336
                     /gene="RDH14"
                     /coded_by="XM_061154853.1:103..1113"
                     /db_xref="GeneID:133064575"
ORIGIN      
        1 mavataaail aalggvlwla arrfvgsnvq rlhqggdsgl mrgktvlitg ansglgrata
       61 aellrlgarv imgcrdrera eeaagqlrre vcpaggpdsg pnsggagelv vkeldlasls
      121 svrffcqeml qeeprldvli nnagvfqcpy mktedgfemq fgvnhlghfl ltnlllgllk
      181 ssapsrivvv ssklykygdi nfedlnseqs ynksfcysrs klanilftre larrlegtnv
      241 tvnvlhpgia rtnlgrhihi pllvrplfnl vswaffktpe egaqtsiyla sspevegvsg
      301 ryfgdckeee llpkamdesv arklwdisev mvgilk
//
LOCUS       XP_061010837             327 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: protein odd-skipped-related 1 [Dama dama].
ACCESSION   XP_061010837
VERSION     XP_061010837.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154854.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..327
                     /product="LOW QUALITY PROTEIN: protein odd-skipped-related
                     1"
                     /calculated_mol_wt=36093
     Region          176..198
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          178..198
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(183,185,187,189..190,193..194,197,211,213,217..218,
                     221..222,225,239,241,243,245..246,249..250,253)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          190..215
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          206..226
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(206,209,222,226)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          218..241
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          234..254
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..327
                     /gene="OSR1"
                     /coded_by="XM_061154854.1:131..1114"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /db_xref="GeneID:133064576"
ORIGIN      
        1 mgsktlpapv pihpslqltn ysflqavngl ptvpsdhlpn lygfsalhav hlhqwtlgyp
       61 amhlprssfs kvpgavsslv darfqlpafp wfphviqpkp eitaggsgpa vlktkprfdf
      121 anlalaatqe dpsklcrgeg pgspagglga lldvtklspe kkptrgrlps ktkkefvckf
      181 cgrhftksyn lliherthtd erpytcdich kafrrqdhlr dhryihskek pfkcqecgkg
      241 fcqsrtlavh ktlhsqvkel kpprsnarqs lrashqdpgh aapfprgnrs prrlwraarg
      301 apgtflhpkr vprvpgargt sqprpgp
//
LOCUS       XP_061010838            1170 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 35 isoform X1 [Dama dama].
ACCESSION   XP_061010838
VERSION     XP_061010838.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154855.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1170
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1170
                     /product="WD repeat-containing protein 35 isoform X1"
                     /calculated_mol_wt=132290
     Region          18..69
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <19..>184
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          74..111
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          206..251
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          256..300
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          306..345
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          734..>929
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     CDS             1..1170
                     /gene="WDR35"
                     /coded_by="XM_061154855.1:120..3632"
                     /db_xref="GeneID:133064578"
ORIGIN      
        1 mffylskkva vpnnvklkcv swnkdqgfia cggddgllkv lkletqtddt klrglaapsn
       61 lsmnqtlegh sgsvqvviwn eqyqklttsd engliivwml ykgswyeemi nnrnksvvrs
      121 mswnadgqki civyedgavi vgsvdgnriw gkdlkgvqlc hvawsadskv llfgmangei
      181 hiydnqgnfi mkmklnclvn vtgavsiagi hwyhgaegyv epdcpclaic fdngrcqimr
      241 hendqnpvli dtgmyvvsiq wnhtgsvlav agsqkvitqd kdinivqfyt pfgehlgtlk
      301 vpgkhmsals weggglkial tvdsfiyfan irpdykwgyc sntvvyaytr pdrpeycvtf
      361 wdtknndkyv kyvkslisit tcgdfcilat kadenhpqfv lvlcnsigtp mdpkyidlvp
      421 lfvtmtkthv iaaskeafyi wqyrvakklt aleinqitrp rkegreriyh vddtpsgsld
      481 gvldyskaiq gtrdpicait asdktlivsr esgtfqrysl pnvgliqkys lncqayqlsl
      541 ncnssrlavi dilgvltffd ldarvtdstg qqvigellkl errdvwdmkw akdnpdlfav
      601 mektrmyvfr nldpeepiqt sgyicnfedl eiksvlldei lknpeypnkd yiinfeirsl
      661 rdsraviekv gienasqfie dnphprlwrl laeaalqkld lhtaeqafvr ckdyqgikfv
      721 krlgnlqsep mkqaevaayf grfeeaermy ldmdrrdlai glrlklgdwf rvlqllktgs
      781 gdaddslleq ahnaigdyfa drqkrlnaiq yyvqgrnqer laecyymled yvglenlans
      841 lpenhmllpe iaqmfvrvgm ceqavtaflk cnqpkaavdt cvhlnqwnka velakshnmk
      901 eigsllakya shlleknkil daielyrkan yfydaaklmf kiadeeakkr tkplrvkkly
      961 vlsallieqy heqmknaqrg kakgksseat salaglleee vlstssrftd nawrgaeayh
     1021 ffilaqrqly agyvdtalkt alhlrdyedi ipavdiysll alcacasraf gtcskafikl
     1081 esletlsseq kqqyedlale iftkhtpkdn rkseldglle ggegklptcv atgspiteyq
     1141 fwmcsvckhc alaqeinnyn fcplchsavg
//
LOCUS       XP_061010839            1146 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 35 isoform X2 [Dama dama].
ACCESSION   XP_061010839
VERSION     XP_061010839.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154856.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1146
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1146
                     /product="WD repeat-containing protein 35 isoform X2"
                     /calculated_mol_wt=129753
     Region          <19..>160
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          50..87
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          91..>297
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          182..227
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          232..276
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          282..321
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          710..>905
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     CDS             1..1146
                     /gene="WDR35"
                     /coded_by="XM_061154856.1:120..3560"
                     /db_xref="GeneID:133064578"
ORIGIN      
        1 mffylskkva vpnnvklkcv swnkdqgfia cggddgllkv lkletqtgsv qvviwneqyq
       61 klttsdengl iivwmlykgs wyeeminnrn ksvvrsmswn adgqkicivy edgavivgsv
      121 dgnriwgkdl kgvqlchvaw sadskvllfg mangeihiyd nqgnfimkmk lnclvnvtga
      181 vsiagihwyh gaegyvepdc pclaicfdng rcqimrhend qnpvlidtgm yvvsiqwnht
      241 gsvlavagsq kvitqdkdin ivqfytpfge hlgtlkvpgk hmsalswegg glkialtvds
      301 fiyfanirpd ykwgycsntv vyaytrpdrp eycvtfwdtk nndkyvkyvk slisittcgd
      361 fcilatkade nhpqfvlvlc nsigtpmdpk yidlvplfvt mtkthviaas keafyiwqyr
      421 vakkltalei nqitrprkeg reriyhvddt psgsldgvld yskaiqgtrd picaitasdk
      481 tlivsresgt fqryslpnvg liqkyslncq ayqlslncns srlavidilg vltffdldar
      541 vtdstgqqvi gellklerrd vwdmkwakdn pdlfavmekt rmyvfrnldp eepiqtsgyi
      601 cnfedleiks vlldeilknp eypnkdyiin feirslrdsr aviekvgien asqfiednph
      661 prlwrllaea alqkldlhta eqafvrckdy qgikfvkrlg nlqsepmkqa evaayfgrfe
      721 eaermyldmd rrdlaiglrl klgdwfrvlq llktgsgdad dslleqahna igdyfadrqk
      781 rlnaiqyyvq grnqerlaec yymledyvgl enlanslpen hmllpeiaqm fvrvgmceqa
      841 vtaflkcnqp kaavdtcvhl nqwnkavela kshnmkeigs llakyashll eknkildaie
      901 lyrkanyfyd aaklmfkiad eeakkrtkpl rvkklyvlsa llieqyheqm knaqrgkakg
      961 ksseatsala glleeevlst ssrftdnawr gaeayhffil aqrqlyagyv dtalktalhl
     1021 rdyediipav diysllalca casrafgtcs kafiklesle tlsseqkqqy edlaleiftk
     1081 htpkdnrkse ldglleggeg klptcvatgs piteyqfwmc svckhcalaq einnynfcpl
     1141 chsavg
//
LOCUS       XP_061010840            1108 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 35 isoform X3 [Dama dama].
ACCESSION   XP_061010840
VERSION     XP_061010840.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154857.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1108
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1108
                     /product="WD repeat-containing protein 35 isoform X3"
                     /calculated_mol_wt=125520
     Region          <3..>122
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          12..51
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          97..140
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          148..189
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          194..238
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          244..283
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          672..>867
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     CDS             1..1108
                     /gene="WDR35"
                     /coded_by="XM_061154857.1:81..3407"
                     /db_xref="GeneID:133064578"
ORIGIN      
        1 mnqtleghsg svqvviwneq yqklttsden gliivwmlyk gswyeeminn rnksvvrsms
       61 wnadgqkici vyedgavivg svdgnriwgk dlkgvqlchv awsadskvll fgmangeihi
      121 ydnqgnfimk mklnclvnvt gavsiagihw yhgaegyvep dcpclaicfd ngrcqimrhe
      181 ndqnpvlidt gmyvvsiqwn htgsvlavag sqkvitqdkd inivqfytpf gehlgtlkvp
      241 gkhmsalswe ggglkialtv dsfiyfanir pdykwgycsn tvvyaytrpd rpeycvtfwd
      301 tknndkyvky vkslisittc gdfcilatka denhpqfvlv lcnsigtpmd pkyidlvplf
      361 vtmtkthvia askeafyiwq yrvakkltal einqitrprk egreriyhvd dtpsgsldgv
      421 ldyskaiqgt rdpicaitas dktlivsres gtfqryslpn vgliqkysln cqayqlslnc
      481 nssrlavidi lgvltffdld arvtdstgqq vigellkler rdvwdmkwak dnpdlfavme
      541 ktrmyvfrnl dpeepiqtsg yicnfedlei ksvlldeilk npeypnkdyi infeirslrd
      601 sraviekvgi enasqfiedn phprlwrlla eaalqkldlh taeqafvrck dyqgikfvkr
      661 lgnlqsepmk qaevaayfgr feeaermyld mdrrdlaigl rlklgdwfrv lqllktgsgd
      721 addslleqah naigdyfadr qkrlnaiqyy vqgrnqerla ecyymledyv glenlanslp
      781 enhmllpeia qmfvrvgmce qavtaflkcn qpkaavdtcv hlnqwnkave lakshnmkei
      841 gsllakyash lleknkilda ielyrkanyf ydaaklmfki adeeakkrtk plrvkklyvl
      901 sallieqyhe qmknaqrgka kgksseatsa laglleeevl stssrftdna wrgaeayhff
      961 ilaqrqlyag yvdtalktal hlrdyediip avdiysllal cacasrafgt cskafikles
     1021 letlsseqkq qyedlaleif tkhtpkdnrk seldgllegg egklptcvat gspiteyqfw
     1081 mcsvckhcal aqeinnynfc plchsavg
//
LOCUS       XP_061010841            1108 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 35 isoform X3 [Dama dama].
ACCESSION   XP_061010841
VERSION     XP_061010841.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154858.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1108
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1108
                     /product="WD repeat-containing protein 35 isoform X3"
                     /calculated_mol_wt=125520
     Region          <3..>122
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          12..51
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          97..140
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          148..189
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          194..238
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          244..283
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          672..>867
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     CDS             1..1108
                     /gene="WDR35"
                     /coded_by="XM_061154858.1:160..3486"
                     /db_xref="GeneID:133064578"
ORIGIN      
        1 mnqtleghsg svqvviwneq yqklttsden gliivwmlyk gswyeeminn rnksvvrsms
       61 wnadgqkici vyedgavivg svdgnriwgk dlkgvqlchv awsadskvll fgmangeihi
      121 ydnqgnfimk mklnclvnvt gavsiagihw yhgaegyvep dcpclaicfd ngrcqimrhe
      181 ndqnpvlidt gmyvvsiqwn htgsvlavag sqkvitqdkd inivqfytpf gehlgtlkvp
      241 gkhmsalswe ggglkialtv dsfiyfanir pdykwgycsn tvvyaytrpd rpeycvtfwd
      301 tknndkyvky vkslisittc gdfcilatka denhpqfvlv lcnsigtpmd pkyidlvplf
      361 vtmtkthvia askeafyiwq yrvakkltal einqitrprk egreriyhvd dtpsgsldgv
      421 ldyskaiqgt rdpicaitas dktlivsres gtfqryslpn vgliqkysln cqayqlslnc
      481 nssrlavidi lgvltffdld arvtdstgqq vigellkler rdvwdmkwak dnpdlfavme
      541 ktrmyvfrnl dpeepiqtsg yicnfedlei ksvlldeilk npeypnkdyi infeirslrd
      601 sraviekvgi enasqfiedn phprlwrlla eaalqkldlh taeqafvrck dyqgikfvkr
      661 lgnlqsepmk qaevaayfgr feeaermyld mdrrdlaigl rlklgdwfrv lqllktgsgd
      721 addslleqah naigdyfadr qkrlnaiqyy vqgrnqerla ecyymledyv glenlanslp
      781 enhmllpeia qmfvrvgmce qavtaflkcn qpkaavdtcv hlnqwnkave lakshnmkei
      841 gsllakyash lleknkilda ielyrkanyf ydaaklmfki adeeakkrtk plrvkklyvl
      901 sallieqyhe qmknaqrgka kgksseatsa laglleeevl stssrftdna wrgaeayhff
      961 ilaqrqlyag yvdtalktal hlrdyediip avdiysllal cacasrafgt cskafikles
     1021 letlsseqkq qyedlaleif tkhtpkdnrk seldgllegg egklptcvat gspiteyqfw
     1081 mcsvckhcal aqeinnynfc plchsavg
//
LOCUS       XP_061010843             148 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 32 [Dama dama].
ACCESSION   XP_061010843
VERSION     XP_061010843.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154860.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..148
                     /product="tetratricopeptide repeat protein 32"
                     /calculated_mol_wt=16592
     Region          11..37
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(13..14,17..18,20,60,63..64,67..68,70..71,94,97..98,
                     101..102,105)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          <15..133
                     /region_name="NlpI"
                     /note="Lipoprotein NlpI, contains TPR repeats [Cell
                     wall/membrane/envelope biogenesis]; COG4785"
                     /db_xref="CDD:443815"
     Region          58..88
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          93..121
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..148
                     /gene="TTC32"
                     /coded_by="XM_061154860.1:124..570"
                     /db_xref="GeneID:133064579"
ORIGIN      
        1 mdgqqgqesp aalalaqahf kkgeyaeaea lysayirqca caasegaarg skcspedlat
       61 afnnrgqiky frvdfyeamd dytsaievqp sfevpyynrg lilyrlgyfd daledfkkvl
      121 dlnpgfqdav lslkqtildk eekqrrny
//
LOCUS       XP_061010844             233 aa            linear   MAM 02-DEC-2023
DEFINITION  lysosomal-associated transmembrane protein 4A [Dama dama].
ACCESSION   XP_061010844
VERSION     XP_061010844.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154861.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..233
                     /product="lysosomal-associated transmembrane protein 4A"
                     /calculated_mol_wt=26689
     Region          10..221
                     /region_name="mtp"
                     /note="Golgi 4-transmembrane spanning transporter;
                     TIGR00799"
                     /db_xref="CDD:273274"
     CDS             1..233
                     /gene="LAPTM4A"
                     /coded_by="XM_061154861.1:154..855"
                     /db_xref="GeneID:133064581"
ORIGIN      
        1 mvsmtfkrsr sdrfystrcc gcchvrtgti ilgtwymvvn llmailltve vthpnsmpav
       61 niqyevigny yssermadna cvlfavsvlm fiissmlvyg aisyqvgwli pffcyrlfdf
      121 vlsclvaiss ltylprikey ldqlpdfpyk ddllaldssc llfivlvffa lfiifkayli
      181 ncvwncykyi nnrnmpeiav ypafeappqy vlptyemavk mpekeppppy ipa
//
LOCUS       XP_061010845             312 aa            linear   MAM 02-DEC-2023
DEFINITION  syndecan-1 [Dama dama].
ACCESSION   XP_061010845
VERSION     XP_061010845.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154862.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..312
                     /product="syndecan-1"
                     /calculated_mol_wt=32140
     Region          247..308
                     /region_name="Syndecan"
                     /note="Syndecan domain; pfam01034"
                     /db_xref="CDD:460035"
     CDS             1..312
                     /gene="SDC1"
                     /coded_by="XM_061154862.1:290..1228"
                     /db_xref="GeneID:133064582"
ORIGIN      
        1 mkraalwlwl calalrlqpa lphsvavnmp pedqdgsgdd ndnfsgsgag alpditssqi
       61 pstwkdlgpv tttatapept spdaiaastt vlptreqpeg ggpvllaeae pgltaqekea
      121 ihppskttlh ptthrvstar attapgpats hphrdvqpdh hetsaptgrg hlephtphve
      181 dggppateka agedpstqvp vvegsgeqdf tfdvsgenaa gaavepgsrn gapgdpeatg
      241 atgasqglld rkevlggvia gglvglifav clvgfmlyrm kkkdegsysl eepkqangga
      301 yqkptkqeef ya
//
LOCUS       XP_061010846            1066 aa            linear   MAM 02-DEC-2023
DEFINITION  pumilio homolog 2 isoform X1 [Dama dama].
ACCESSION   XP_061010846
VERSION     XP_061010846.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154863.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1066
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1066
                     /product="pumilio homolog 2 isoform X1"
                     /calculated_mol_wt=114235
     Region          721..1044
                     /region_name="Pumilio"
                     /note="Pumilio-family RNA binding domain; cd07920"
                     /db_xref="CDD:153420"
     Site            order(777..778,781,813..814,817,852,855,887..888,891,
                     920..921,923..924,927,956..957,959..960,963,999..1000,
                     1002..1003,1006,1036,1039)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:153420"
     CDS             1..1066
                     /gene="PUM2"
                     /coded_by="XM_061154863.1:172..3372"
                     /db_xref="GeneID:133064583"
ORIGIN      
        1 mnhdfqalal esrgmgellp tkkfwepdds tkdgqkgifl gddewretaw gtshhsmsqp
       61 imvqrrsgqg fhgnsevnai lsprsesggl gvsmveyvls sspadkldsr frkgtfgtrd
      121 aetdgpekgd qkgkaspfee dqnrdlkqgd dddskingrg lpngmdadck dfnrtpgsrq
      181 asptevverl gpstnppegl gplpnpttnk plveefsnpe tqnldameqv gldslqfdyp
      241 gnqvpmdssg atvglfdyns qqqlfqrtna ltvqqltaaq qqqyalataq qphiagvfsa
      301 glapaafvpn pyiisaappg tdpytaagla aaatlagpav vppqyygvpw gvypanlfqq
      361 qaaaaannta nqqaasqaqp gqqqvlraga gqrpltpnqg qqgqqaesla aanptlafgq
      421 glatgmpgyq vlaptayydq tgalvvgpga rtglgapvrl maptpvliss aaaqaaaaaa
      481 aggtansltg stnglfrpig tqpppqqqqq qqppstnlqs nsfygstslt nssqssslfs
      541 hgpgqpgsts lgfgsssslg aaigsalsgf gssvgssass satrreslst ssdlykrsss
      601 slapigqpfy nslgfsssps pigmplpsqt pghsltppps lsshgssssl hlggltngsg
      661 ryisaapgae akyrsasgts slfssssqlf ppsrlrynrs dimpsgrsrl ledfrnnrfp
      721 nlqlrdligh ivefsqdqhg srfiqqkler atpaerqmvf neilqaayql mtdvfgnyvi
      781 qkffefgsld qklalatrir ghvlplalqm ygcrviqkal esissdqqvi semvkeldgh
      841 vlkcvkdqng nhvvqkciec vqpqslqfii dafkgqvfvl sthpygcrvi qrilehctae
      901 qtlpileelh qhteqlvqdq ygnyviqhvl ehgrpedksk ivseirgkvl alsqhkfasn
      961 vvekcvthas raerallide vccqndgphs alytmmkdqy anyvvqkmid maepaqrkii
     1021 vhkirphitt lrkytygkhi laklekyylk nspdlgpvgg ppngml
//
LOCUS       XP_061010847            1066 aa            linear   MAM 02-DEC-2023
DEFINITION  pumilio homolog 2 isoform X1 [Dama dama].
ACCESSION   XP_061010847
VERSION     XP_061010847.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154864.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1066
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1066
                     /product="pumilio homolog 2 isoform X1"
                     /calculated_mol_wt=114235
     Region          721..1044
                     /region_name="Pumilio"
                     /note="Pumilio-family RNA binding domain; cd07920"
                     /db_xref="CDD:153420"
     Site            order(777..778,781,813..814,817,852,855,887..888,891,
                     920..921,923..924,927,956..957,959..960,963,999..1000,
                     1002..1003,1006,1036,1039)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:153420"
     CDS             1..1066
                     /gene="PUM2"
                     /coded_by="XM_061154864.1:38..3238"
                     /db_xref="GeneID:133064583"
ORIGIN      
        1 mnhdfqalal esrgmgellp tkkfwepdds tkdgqkgifl gddewretaw gtshhsmsqp
       61 imvqrrsgqg fhgnsevnai lsprsesggl gvsmveyvls sspadkldsr frkgtfgtrd
      121 aetdgpekgd qkgkaspfee dqnrdlkqgd dddskingrg lpngmdadck dfnrtpgsrq
      181 asptevverl gpstnppegl gplpnpttnk plveefsnpe tqnldameqv gldslqfdyp
      241 gnqvpmdssg atvglfdyns qqqlfqrtna ltvqqltaaq qqqyalataq qphiagvfsa
      301 glapaafvpn pyiisaappg tdpytaagla aaatlagpav vppqyygvpw gvypanlfqq
      361 qaaaaannta nqqaasqaqp gqqqvlraga gqrpltpnqg qqgqqaesla aanptlafgq
      421 glatgmpgyq vlaptayydq tgalvvgpga rtglgapvrl maptpvliss aaaqaaaaaa
      481 aggtansltg stnglfrpig tqpppqqqqq qqppstnlqs nsfygstslt nssqssslfs
      541 hgpgqpgsts lgfgsssslg aaigsalsgf gssvgssass satrreslst ssdlykrsss
      601 slapigqpfy nslgfsssps pigmplpsqt pghsltppps lsshgssssl hlggltngsg
      661 ryisaapgae akyrsasgts slfssssqlf ppsrlrynrs dimpsgrsrl ledfrnnrfp
      721 nlqlrdligh ivefsqdqhg srfiqqkler atpaerqmvf neilqaayql mtdvfgnyvi
      781 qkffefgsld qklalatrir ghvlplalqm ygcrviqkal esissdqqvi semvkeldgh
      841 vlkcvkdqng nhvvqkciec vqpqslqfii dafkgqvfvl sthpygcrvi qrilehctae
      901 qtlpileelh qhteqlvqdq ygnyviqhvl ehgrpedksk ivseirgkvl alsqhkfasn
      961 vvekcvthas raerallide vccqndgphs alytmmkdqy anyvvqkmid maepaqrkii
     1021 vhkirphitt lrkytygkhi laklekyylk nspdlgpvgg ppngml
//
LOCUS       XP_061010848            1064 aa            linear   MAM 02-DEC-2023
DEFINITION  pumilio homolog 2 isoform X2 [Dama dama].
ACCESSION   XP_061010848
VERSION     XP_061010848.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154865.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1064
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1064
                     /product="pumilio homolog 2 isoform X2"
                     /calculated_mol_wt=114023
     Region          721..1042
                     /region_name="Pumilio"
                     /note="Pumilio-family RNA binding domain; cd07920"
                     /db_xref="CDD:153420"
     Site            order(777..778,781,813..814,817,850,853,885..886,889,
                     918..919,921..922,925,954..955,957..958,961,997..998,
                     1000..1001,1004,1034,1037)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:153420"
     CDS             1..1064
                     /gene="PUM2"
                     /coded_by="XM_061154865.1:172..3366"
                     /db_xref="GeneID:133064583"
ORIGIN      
        1 mnhdfqalal esrgmgellp tkkfwepdds tkdgqkgifl gddewretaw gtshhsmsqp
       61 imvqrrsgqg fhgnsevnai lsprsesggl gvsmveyvls sspadkldsr frkgtfgtrd
      121 aetdgpekgd qkgkaspfee dqnrdlkqgd dddskingrg lpngmdadck dfnrtpgsrq
      181 asptevverl gpstnppegl gplpnpttnk plveefsnpe tqnldameqv gldslqfdyp
      241 gnqvpmdssg atvglfdyns qqqlfqrtna ltvqqltaaq qqqyalataq qphiagvfsa
      301 glapaafvpn pyiisaappg tdpytaagla aaatlagpav vppqyygvpw gvypanlfqq
      361 qaaaaannta nqqaasqaqp gqqqvlraga gqrpltpnqg qqgqqaesla aanptlafgq
      421 glatgmpgyq vlaptayydq tgalvvgpga rtglgapvrl maptpvliss aaaqaaaaaa
      481 aggtansltg stnglfrpig tqpppqqqqq qqppstnlqs nsfygstslt nssqssslfs
      541 hgpgqpgsts lgfgsssslg aaigsalsgf gssvgssass satrreslst ssdlykrsss
      601 slapigqpfy nslgfsssps pigmplpsqt pghsltppps lsshgssssl hlggltngsg
      661 ryisaapgae akyrsasgts slfssssqlf ppsrlrynrs dimpsgrsrl ledfrnnrfp
      721 nlqlrdligh ivefsqdqhg srfiqqkler atpaerqmvf neilqaayql mtdvfgnyvi
      781 qkffefgsld qklalatrir ghvlplalqm ygcrviqkal esissdqqse mvkeldghvl
      841 kcvkdqngnh vvqkciecvq pqslqfiida fkgqvfvlst hpygcrviqr ilehctaeqt
      901 lpileelhqh teqlvqdqyg nyviqhvleh grpedkskiv seirgkvlal sqhkfasnvv
      961 ekcvthasra erallidevc cqndgphsal ytmmkdqyan yvvqkmidma epaqrkiivh
     1021 kirphittlr kytygkhila klekyylkns pdlgpvggpp ngml
//
LOCUS       XP_061010849            1048 aa            linear   MAM 02-DEC-2023
DEFINITION  pumilio homolog 2 isoform X3 [Dama dama].
ACCESSION   XP_061010849
VERSION     XP_061010849.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154866.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1048
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1048
                     /product="pumilio homolog 2 isoform X3"
                     /calculated_mol_wt=112307
     Region          703..1026
                     /region_name="Pumilio"
                     /note="Pumilio-family RNA binding domain; cd07920"
                     /db_xref="CDD:153420"
     Site            order(759..760,763,795..796,799,834,837,869..870,873,
                     902..903,905..906,909,938..939,941..942,945,981..982,
                     984..985,988,1018,1021)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:153420"
     CDS             1..1048
                     /gene="PUM2"
                     /coded_by="XM_061154866.1:172..3318"
                     /db_xref="GeneID:133064583"
ORIGIN      
        1 mnhdfqalal esrgmgellp tkkfwepdds tkdgqkgifl gddewretaw gtshhsmsqp
       61 imvqrrsgqg fhgnsevnai lsprsesggl gvsmveyvls sspadkldsr frkgtfgtrd
      121 aetdgpekgd qkgkaspfee dqnrdlkqgd dddskingrg lpngmdadck dfnrtpgsrq
      181 asptevverl gpstnppegl gplpnpttnk plveefsnpe tqnldameqv gldslqfdyp
      241 gnqvpmdssg atvglfdyns qqqlfqrtna ltvqqltaaq qqqyalataq qphiagvfsa
      301 glapaafvpn pyiisaappg tdpytaagla aaatlaanlf qqqaaaaann tanqqaasqa
      361 qpgqqqvlra gagqrpltpn qgqqgqqaes laaanptlaf gqglatgmpg yqvlaptayy
      421 dqtgalvvgp gartglgapv rlmaptpvli ssaaaqaaaa aaaggtansl tgstnglfrp
      481 igtqpppqqq qqqqppstnl qsnsfygsts ltnssqsssl fshgpgqpgs tslgfgssss
      541 lgaaigsals gfgssvgssa sssatrresl stssdlykrs ssslapigqp fynslgfsss
      601 pspigmplps qtpghsltpp pslsshgsss slhlggltng sgryisaapg aeakyrsasg
      661 tsslfssssq lfppsrlryn rsdimpsgrs rlledfrnnr fpnlqlrdli ghivefsqdq
      721 hgsrfiqqkl eratpaerqm vfneilqaay qlmtdvfgny viqkffefgs ldqklalatr
      781 irghvlplal qmygcrviqk alesissdqq visemvkeld ghvlkcvkdq ngnhvvqkci
      841 ecvqpqslqf iidafkgqvf vlsthpygcr viqrilehct aeqtlpilee lhqhteqlvq
      901 dqygnyviqh vlehgrpedk skivseirgk vlalsqhkfa snvvekcvth asraeralli
      961 devccqndgp hsalytmmkd qyanyvvqkm idmaepaqrk iivhkirphi ttlrkytygk
     1021 hilaklekyy lknspdlgpv ggppngml
//
LOCUS       XP_061010850             987 aa            linear   MAM 02-DEC-2023
DEFINITION  pumilio homolog 2 isoform X4 [Dama dama].
ACCESSION   XP_061010850
VERSION     XP_061010850.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154867.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..987
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..987
                     /product="pumilio homolog 2 isoform X4"
                     /calculated_mol_wt=106234
     Region          642..965
                     /region_name="Pumilio"
                     /note="Pumilio-family RNA binding domain; cd07920"
                     /db_xref="CDD:153420"
     Site            order(698..699,702,734..735,738,773,776,808..809,812,
                     841..842,844..845,848,877..878,880..881,884,920..921,
                     923..924,927,957,960)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:153420"
     CDS             1..987
                     /gene="PUM2"
                     /coded_by="XM_061154867.1:172..3135"
                     /db_xref="GeneID:133064583"
ORIGIN      
        1 mnhdfqalal esrgmgellp tkkfwepdds tkdgqkgifl gddewretaw gtshhsmsqp
       61 imvqrrsgqg fhgnsevnai lsprsesggl gvsmveyvls sspadkldsr frkgtfgtrd
      121 aetdgpekgd qkgkaspfee dqnrdlkqgd dddskingrg lpngmdadck dfnrtpgsrq
      181 asptevverl gpstnppegl gplpnpttnk plveefsnpe tqnldameqv gldslqfdyp
      241 gnqvpmdssg atvglfdyns qqqlfqrtna ltvqqltaaq qqqyalataq qphiagvfsa
      301 glapaafvpn pyiisaappg tdpytaagla aaatlagpav vppqyygvpw gvypanlfqq
      361 qaaaaannta nqqaasqaqp gqqqvlraga gqrpltpnqg qqgqqaesla aanptlafgq
      421 glatgmpgyq vlaptayydq tgalvvgpga rtglgapvrl maptpvliss aaaqaaaaaa
      481 aggtansltg stnglfrpig tqpppqqqqq qqppstnlqs nsfygstslt nssqssslfs
      541 hgpgqpgsts lgfgsssslg aaigsalsgf gssggltngs gryisaapga eakyrsasgt
      601 sslfssssql fppsrlrynr sdimpsgrsr lledfrnnrf pnlqlrdlig hivefsqdqh
      661 gsrfiqqkle ratpaerqmv fneilqaayq lmtdvfgnyv iqkffefgsl dqklalatri
      721 rghvlplalq mygcrviqka lesissdqqv isemvkeldg hvlkcvkdqn gnhvvqkcie
      781 cvqpqslqfi idafkgqvfv lsthpygcrv iqrilehcta eqtlpileel hqhteqlvqd
      841 qygnyviqhv lehgrpedks kivseirgkv lalsqhkfas nvvekcvtha sraerallid
      901 evccqndgph salytmmkdq yanyvvqkmi dmaepaqrki ivhkirphit tlrkytygkh
      961 ilaklekyyl knspdlgpvg gppngml
//
LOCUS       XP_061010851             985 aa            linear   MAM 02-DEC-2023
DEFINITION  pumilio homolog 2 isoform X5 [Dama dama].
ACCESSION   XP_061010851
VERSION     XP_061010851.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154868.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..985
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..985
                     /product="pumilio homolog 2 isoform X5"
                     /calculated_mol_wt=106022
     Region          642..963
                     /region_name="Pumilio"
                     /note="Pumilio-family RNA binding domain; cd07920"
                     /db_xref="CDD:153420"
     Site            order(698..699,702,734..735,738,771,774,806..807,810,
                     839..840,842..843,846,875..876,878..879,882,918..919,
                     921..922,925,955,958)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:153420"
     CDS             1..985
                     /gene="PUM2"
                     /coded_by="XM_061154868.1:172..3129"
                     /db_xref="GeneID:133064583"
ORIGIN      
        1 mnhdfqalal esrgmgellp tkkfwepdds tkdgqkgifl gddewretaw gtshhsmsqp
       61 imvqrrsgqg fhgnsevnai lsprsesggl gvsmveyvls sspadkldsr frkgtfgtrd
      121 aetdgpekgd qkgkaspfee dqnrdlkqgd dddskingrg lpngmdadck dfnrtpgsrq
      181 asptevverl gpstnppegl gplpnpttnk plveefsnpe tqnldameqv gldslqfdyp
      241 gnqvpmdssg atvglfdyns qqqlfqrtna ltvqqltaaq qqqyalataq qphiagvfsa
      301 glapaafvpn pyiisaappg tdpytaagla aaatlagpav vppqyygvpw gvypanlfqq
      361 qaaaaannta nqqaasqaqp gqqqvlraga gqrpltpnqg qqgqqaesla aanptlafgq
      421 glatgmpgyq vlaptayydq tgalvvgpga rtglgapvrl maptpvliss aaaqaaaaaa
      481 aggtansltg stnglfrpig tqpppqqqqq qqppstnlqs nsfygstslt nssqssslfs
      541 hgpgqpgsts lgfgsssslg aaigsalsgf gssggltngs gryisaapga eakyrsasgt
      601 sslfssssql fppsrlrynr sdimpsgrsr lledfrnnrf pnlqlrdlig hivefsqdqh
      661 gsrfiqqkle ratpaerqmv fneilqaayq lmtdvfgnyv iqkffefgsl dqklalatri
      721 rghvlplalq mygcrviqka lesissdqqs emvkeldghv lkcvkdqngn hvvqkciecv
      781 qpqslqfiid afkgqvfvls thpygcrviq rilehctaeq tlpileelhq hteqlvqdqy
      841 gnyviqhvle hgrpedkski vseirgkvla lsqhkfasnv vekcvthasr aerallidev
      901 ccqndgphsa lytmmkdqya nyvvqkmidm aepaqrkiiv hkirphittl rkytygkhil
      961 aklekyylkn spdlgpvggp pngml
//
LOCUS       XP_061010852             975 aa            linear   MAM 02-DEC-2023
DEFINITION  pumilio homolog 2 isoform X6 [Dama dama].
ACCESSION   XP_061010852
VERSION     XP_061010852.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154869.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..975
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..975
                     /product="pumilio homolog 2 isoform X6"
                     /calculated_mol_wt=104999
     Region          630..953
                     /region_name="Pumilio"
                     /note="Pumilio-family RNA binding domain; cd07920"
                     /db_xref="CDD:153420"
     Site            order(686..687,690,722..723,726,761,764,796..797,800,
                     829..830,832..833,836,865..866,868..869,872,908..909,
                     911..912,915,945,948)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:153420"
     CDS             1..975
                     /gene="PUM2"
                     /coded_by="XM_061154869.1:172..3099"
                     /db_xref="GeneID:133064583"
ORIGIN      
        1 mnhdfqalal esrgmgellp tkkfwepdds tkdgqkgifl gddewretaw gtshhsmsqp
       61 imvqrrsgqg fhgnsevnai lsprsesggl gvsmveyvls sspadkldsr frkgtfgtrd
      121 aetdgpekgd qkgkaspfee dqnrdlkqgd dddskingrg lpngmdadck dfnrtpgsrq
      181 asptevverl gpstnppegl gplpnpttnk plveefsnpe tqnldameqv gldslqfdyp
      241 gnqvpmdssg atvglfdyns qqqlfqrtna ltvqqltaaq qqqyalataq qphiagvfsa
      301 glapaafvpn pyiisaappg tdpytaagla aaatlagyqv laptayydqt galvvgpgar
      361 tglgapvrlm aptpvlissa aaqaaaaaaa ggtansltgs tnglfrpigt qpppqqqqqq
      421 qppstnlqsn sfygstsltn ssqssslfsh gpgqpgstsl gfgsssslga aigsalsgfg
      481 ssvgssasss atrreslsts sdlykrssss lapigqpfyn slgfssspsp igmplpsqtp
      541 ghsltpppsl sshgsssslh lggltngsgr yisaapgaea kyrsasgtss lfssssqlfp
      601 psrlrynrsd impsgrsrll edfrnnrfpn lqlrdlighi vefsqdqhgs rfiqqklera
      661 tpaerqmvfn eilqaayqlm tdvfgnyviq kffefgsldq klalatrirg hvlplalqmy
      721 gcrviqkale sissdqqvis emvkeldghv lkcvkdqngn hvvqkciecv qpqslqfiid
      781 afkgqvfvls thpygcrviq rilehctaeq tlpileelhq hteqlvqdqy gnyviqhvle
      841 hgrpedkski vseirgkvla lsqhkfasnv vekcvthasr aerallidev ccqndgphsa
      901 lytmmkdqya nyvvqkmidm aepaqrkiiv hkirphittl rkytygkhil aklekyylkn
      961 spdlgpvggp pngml
//
LOCUS       XP_061010853            1010 aa            linear   MAM 02-DEC-2023
DEFINITION  pumilio homolog 2 isoform X7 [Dama dama].
ACCESSION   XP_061010853
VERSION     XP_061010853.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154870.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1010
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1010
                     /product="pumilio homolog 2 isoform X7"
                     /calculated_mol_wt=107848
     Region          665..988
                     /region_name="Pumilio"
                     /note="Pumilio-family RNA binding domain; cd07920"
                     /db_xref="CDD:153420"
     Site            order(721..722,725,757..758,761,796,799,831..832,835,
                     864..865,867..868,871,900..901,903..904,907,943..944,
                     946..947,950,980,983)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:153420"
     CDS             1..1010
                     /gene="PUM2"
                     /coded_by="XM_061154870.1:243..3275"
                     /db_xref="GeneID:133064583"
ORIGIN      
        1 msqpimvqrr sgqgfhgnse vnailsprse sgglgvsmve yvlssspadk ldsrfrkgtf
       61 gtrdaetdgp ekgdqkgkas pfeedqnrdl kqgddddski ngrglpngmd adckdfnrtp
      121 gsrqasptev verlgpstnp peglgplpnp ttnkplveef snpetqnlda meqvgldslq
      181 fdypgnqvpm dssgatvglf dynsqqqlfq rtnaltvqql taaqqqqyal ataqqphiag
      241 vfsaglapaa fvpnpyiisa appgtdpyta aglaaaatla gpavvppqyy gvpwgvypan
      301 lfqqqaaaaa nntanqqaas qaqpgqqqvl ragagqrplt pnqgqqgqqa eslaaanptl
      361 afgqglatgm pgyqvlapta yydqtgalvv gpgartglga pvrlmaptpv lissaaaqaa
      421 aaaaaggtan sltgstnglf rpigtqpppq qqqqqqppst nlqsnsfygs tsltnssqss
      481 slfshgpgqp gstslgfgss sslgaaigsa lsgfgssvgs sasssatrre slstssdlyk
      541 rsssslapig qpfynslgfs sspspigmpl psqtpghslt pppslsshgs ssslhlgglt
      601 ngsgryisaa pgaeakyrsa sgtsslfsss sqlfppsrlr ynrsdimpsg rsrlledfrn
      661 nrfpnlqlrd lighivefsq dqhgsrfiqq kleratpaer qmvfneilqa ayqlmtdvfg
      721 nyviqkffef gsldqklala trirghvlpl alqmygcrvi qkalesissd qqvisemvke
      781 ldghvlkcvk dqngnhvvqk ciecvqpqsl qfiidafkgq vfvlsthpyg crviqrileh
      841 ctaeqtlpil eelhqhteql vqdqygnyvi qhvlehgrpe dkskivseir gkvlalsqhk
      901 fasnvvekcv thasraeral lidevccqnd gphsalytmm kdqyanyvvq kmidmaepaq
      961 rkiivhkirp hittlrkyty gkhilaklek yylknspdlg pvggppngml
//
LOCUS       XP_061010856             196 aa            linear   MAM 02-DEC-2023
DEFINITION  rho-related GTP-binding protein RhoB [Dama dama].
ACCESSION   XP_061010856
VERSION     XP_061010856.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154873.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..196
                     /product="rho-related GTP-binding protein RhoB"
                     /calculated_mol_wt=21992
     Region          5..179
                     /region_name="RhoA_like"
                     /note="Ras homology family A (RhoA)-like includes RhoA,
                     RhoB and RhoC; cd01870"
                     /db_xref="CDD:206662"
     Site            order(5,34,37..38,41,43,45,54,58..59,61..63,66,68,72)
                     /site_type="other"
                     /note="GEF (guanine nucleotide exchange factor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206662"
     Site            12..19
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206662"
     Site            order(15..20,34..35,37,59..60,118,120,161..162)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206662"
     Site            order(23,25..29,42..43,45..47,52..54,163..164,168..169,
                     172)
                     /site_type="active"
                     /note="PKN/PRK1 effector interaction site [active]"
                     /db_xref="CDD:206662"
     Site            order(34,36,38..39,63..66,69,72,94)
                     /site_type="other"
                     /note="GAP (GTPase-activating protein) interaction site
                     [polypeptide binding]"
                     /db_xref="CDD:206662"
     Site            34..42
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206662"
     Site            order(37..38,61,66,68..69,71..72,75,105..106,108)
                     /site_type="other"
                     /note="GDI (guanine nucleotide dissociation inhibitor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206662"
     Site            37
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206662"
     Site            order(39,65..69,72,97,101,105)
                     /site_type="active"
                     /note="Mdia effector interaction site [active]"
                     /db_xref="CDD:206662"
     Site            order(39..40,65..66,68..69,72)
                     /site_type="other"
                     /note="Rho kinase (ROCK) effector interaction site
                     [polypeptide binding]"
                     /db_xref="CDD:206662"
     Site            59..62
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206662"
     Site            62..79
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206662"
     Site            117..120
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206662"
     Site            160..162
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206662"
     CDS             1..196
                     /gene="RHOB"
                     /coded_by="XM_061154873.1:387..977"
                     /db_xref="GeneID:133064585"
ORIGIN      
        1 maairkklvv vgdgacgktc llivfskdef pevyvptvfe nyvadievdg kqvelalwdt
       61 agqedydrlr plsypdtdvi lmcfsvdspd slenipekwv pevkhfcpnv piilvankkd
      121 lrsdehvrte larmkqepvr tddgramavr iqaydylecs aktkegvrev fetatraalq
      181 krygsqngci ncckvl
//
LOCUS       XP_061010857             395 aa            linear   MAM 02-DEC-2023
DEFINITION  HCLS1-binding protein 3 isoform X1 [Dama dama].
ACCESSION   XP_061010857
VERSION     XP_061010857.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154874.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..395
                     /product="HCLS1-binding protein 3 isoform X1"
                     /calculated_mol_wt=42977
     Region          19..138
                     /region_name="PX_HS1BP3"
                     /note="The phosphoinositide binding Phox Homology domain
                     of HS1BP3; cd06868"
                     /db_xref="CDD:132778"
     Site            order(70..72,96..97,108)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132778"
     CDS             1..395
                     /gene="HS1BP3"
                     /coded_by="XM_061154874.1:72..1259"
                     /db_xref="GeneID:133064586"
ORIGIN      
        1 mqspavlvts rrvqnvhtgl dlsvpqhqev rgkmmsghve yqilvvtrla afksakhrpe
       61 dvvqflvskk ysdieefyqk lssryptasl pplprkvlfv gegdirerra lfdeilrcvs
      121 kdaelagspe lleflgtrsp gaadlsgrdv svldadsqag dedaldffqq qdrveneglp
      181 tlgqqdgdag ksleeeeeea ldplgimrsk kpkkrpavam kpkaaprlti fdeevdpdeg
      241 lfssggkpsp rghaedsppg dplklfddpd lggavplgdp lllpaapqsg gatpreghre
      301 aseelfrvee dldqilnlga epkpqpkprp kpkppvaakp alprkpavpp ragppeaaat
      361 qqqkqqqqiq amdemdilqy irdhdvpgqa apslf
//
LOCUS       XP_061010858             362 aa            linear   MAM 02-DEC-2023
DEFINITION  HCLS1-binding protein 3 isoform X2 [Dama dama].
ACCESSION   XP_061010858
VERSION     XP_061010858.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154875.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..362
                     /product="HCLS1-binding protein 3 isoform X2"
                     /calculated_mol_wt=39326
     Region          1..105
                     /region_name="PX_HS1BP3"
                     /note="The phosphoinositide binding Phox Homology domain
                     of HS1BP3; cd06868"
                     /db_xref="CDD:132778"
     Site            order(37..39,63..64,75)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132778"
     CDS             1..362
                     /gene="HS1BP3"
                     /coded_by="XM_061154875.1:277..1365"
                     /db_xref="GeneID:133064586"
ORIGIN      
        1 mmsghveyqi lvvtrlaafk sakhrpedvv qflvskkysd ieefyqklss ryptaslppl
       61 prkvlfvgeg direrralfd eilrcvskda elagspelle flgtrspgaa dlsgrdvsvl
      121 dadsqagded aldffqqqdr veneglptlg qqdgdagksl eeeeeealdp lgimrskkpk
      181 krpavamkpk aaprltifde evdpdeglfs sggkpsprgh aedsppgdpl klfddpdlgg
      241 avplgdplll paapqsggat preghrease elfrveedld qilnlgaepk pqpkprpkpk
      301 ppvaakpalp rkpavpprag ppeaaatqqq kqqqqiqamd emdilqyird hdvpgqaaps
      361 lf
//
LOCUS       XP_061010859             362 aa            linear   MAM 02-DEC-2023
DEFINITION  HCLS1-binding protein 3 isoform X2 [Dama dama].
ACCESSION   XP_061010859
VERSION     XP_061010859.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154876.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..362
                     /product="HCLS1-binding protein 3 isoform X2"
                     /calculated_mol_wt=39326
     Region          1..105
                     /region_name="PX_HS1BP3"
                     /note="The phosphoinositide binding Phox Homology domain
                     of HS1BP3; cd06868"
                     /db_xref="CDD:132778"
     Site            order(37..39,63..64,75)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132778"
     CDS             1..362
                     /gene="HS1BP3"
                     /coded_by="XM_061154876.1:452..1540"
                     /db_xref="GeneID:133064586"
ORIGIN      
        1 mmsghveyqi lvvtrlaafk sakhrpedvv qflvskkysd ieefyqklss ryptaslppl
       61 prkvlfvgeg direrralfd eilrcvskda elagspelle flgtrspgaa dlsgrdvsvl
      121 dadsqagded aldffqqqdr veneglptlg qqdgdagksl eeeeeealdp lgimrskkpk
      181 krpavamkpk aaprltifde evdpdeglfs sggkpsprgh aedsppgdpl klfddpdlgg
      241 avplgdplll paapqsggat preghrease elfrveedld qilnlgaepk pqpkprpkpk
      301 ppvaakpalp rkpavpprag ppeaaatqqq kqqqqiqamd emdilqyird hdvpgqaaps
      361 lf
//
LOCUS       XP_061010860             447 aa            linear   MAM 02-DEC-2023
DEFINITION  growth/differentiation factor 7 [Dama dama].
ACCESSION   XP_061010860
VERSION     XP_061010860.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154877.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..447
                     /product="growth/differentiation factor 7"
                     /calculated_mol_wt=46141
     Region          72..230
                     /region_name="TGFb_propeptide"
                     /note="TGF-beta propeptide; cl46657"
                     /db_xref="CDD:480997"
     Region          349..447
                     /region_name="TGF_beta_GDF5_6_7"
                     /note="transforming growth factor beta (TGF-beta) like
                     domain found in growth/differentiation factor 5 (GDF5),
                     factor 6 (GDF6), factor 7 (GDF7) and similar proteins;
                     cd13766"
                     /db_xref="CDD:381644"
     Site            order(351..353,357..360,363,370,372..374,376,381..386,
                     390..392,394..396,398..399,401..402,404,407..408,411,
                     413..414,417,422,426,434,436..439,441,447)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381644"
     CDS             1..447
                     /gene="GDF7"
                     /coded_by="XM_061154877.1:1..1344"
                     /db_xref="GeneID:133064588"
ORIGIN      
        1 mdlsaaaalc lwllsacrpr dgleaaavlr aagagpaest ggggggggtt laaaagasaa
       61 laaaspgprg ahratgsgfr ngsvvphqfm mslyrtlagr tpagpvaast sgsgradtvt
      121 gfadqatade saaetglnfl fdvsslpdad evlgaelrvl rreseargpg saspplllls
      181 tcpsaarapr llhsraaesl daarwevfdv adalrrhrre prpsrafcls lrgvvgsarv
      241 plalrllgfg srggggalae erallvvssr tqrkeslfre irsqaralga alaaepppdp
      301 gpgvgsptav iggrrrrrta laaaraaqgs gggavrghgr rgrsrcsrkp lhvdfkelgw
      361 ddwiiapldy eayhcegvcd fplrshlept nhaiiqtlln smapdaapas ccvparlspi
      421 silyidaann vvykqyedmv veacgcr
//
LOCUS       XP_061010861             325 aa            linear   MAM 02-DEC-2023
DEFINITION  lipid droplet-associated hydrolase isoform X1 [Dama dama].
ACCESSION   XP_061010861
VERSION     XP_061010861.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154878.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..325
                     /product="lipid droplet-associated hydrolase isoform X1"
                     /calculated_mol_wt=37387
     Region          43..303
                     /region_name="LIDHydrolase"
                     /note="Lipid-droplet associated hydrolase; pfam10230"
                     /db_xref="CDD:370901"
     CDS             1..325
                     /gene="LDAH"
                     /coded_by="XM_061154878.1:218..1195"
                     /db_xref="GeneID:133064589"
ORIGIN      
        1 mdseikeeip vheefilccg vetqvlkcgp wtdlinnqrg trpkllifii pgnpgfsafy
       61 vpfakalysa tkrrfpvwii shaghvlapr gkkilttsed pnaeevkdiy glrgqvehkl
      121 aflrtqvpke mklviighsi gsyfsleilk hapelpvirs illfptierm sespkgrfat
      181 pllcwlryal yvpcylllkp wpekikslvi rmalqmmdmp refsclntle pfclvnaayl
      241 gsqemrevvk rdnetikehl sklifyygtt dgwcpkqyyd dikkdfpegd irlcekkiph
      301 afilnffqev anmvadwlkd dlskm
//
LOCUS       XP_061010862             325 aa            linear   MAM 02-DEC-2023
DEFINITION  lipid droplet-associated hydrolase isoform X1 [Dama dama].
ACCESSION   XP_061010862
VERSION     XP_061010862.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154879.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..325
                     /product="lipid droplet-associated hydrolase isoform X1"
                     /calculated_mol_wt=37387
     Region          43..303
                     /region_name="LIDHydrolase"
                     /note="Lipid-droplet associated hydrolase; pfam10230"
                     /db_xref="CDD:370901"
     CDS             1..325
                     /gene="LDAH"
                     /coded_by="XM_061154879.1:78..1055"
                     /db_xref="GeneID:133064589"
ORIGIN      
        1 mdseikeeip vheefilccg vetqvlkcgp wtdlinnqrg trpkllifii pgnpgfsafy
       61 vpfakalysa tkrrfpvwii shaghvlapr gkkilttsed pnaeevkdiy glrgqvehkl
      121 aflrtqvpke mklviighsi gsyfsleilk hapelpvirs illfptierm sespkgrfat
      181 pllcwlryal yvpcylllkp wpekikslvi rmalqmmdmp refsclntle pfclvnaayl
      241 gsqemrevvk rdnetikehl sklifyygtt dgwcpkqyyd dikkdfpegd irlcekkiph
      301 afilnffqev anmvadwlkd dlskm
//
LOCUS       XP_061010863             270 aa            linear   MAM 02-DEC-2023
DEFINITION  lipid droplet-associated hydrolase isoform X2 [Dama dama].
ACCESSION   XP_061010863
VERSION     XP_061010863.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154880.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..270
                     /product="lipid droplet-associated hydrolase isoform X2"
                     /calculated_mol_wt=30739
     Region          43..262
                     /region_name="LIDHydrolase"
                     /note="Lipid-droplet associated hydrolase; pfam10230"
                     /db_xref="CDD:370901"
     CDS             1..270
                     /gene="LDAH"
                     /coded_by="XM_061154880.1:224..1036"
                     /db_xref="GeneID:133064589"
ORIGIN      
        1 mdseikeeip vheefilccg vetqvlkcgp wtdlinnqrg trpkllifii pgnpgfsafy
       61 vpfakalysa tkrrfpvwii shaghvlapr gkkilttsed pnaeevkdiy glrgqvehkl
      121 aflrtqvpke mklviighsi gsyfsleilk hapelpvirs illfptierm sespkgrfat
      181 pllcwlryal yvpcylllkp wpekikslvi rmalqmmdmp refsclntle pfclvnaayl
      241 gsqemrevvk rdnetikehl sknfvvsael
//
LOCUS       XP_061010864             195 aa            linear   MAM 02-DEC-2023
DEFINITION  lipid droplet-associated hydrolase isoform X3 [Dama dama].
ACCESSION   XP_061010864
VERSION     XP_061010864.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154881.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..195
                     /product="lipid droplet-associated hydrolase isoform X3"
                     /calculated_mol_wt=22703
     Region          <1..173
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
     CDS             1..195
                     /gene="LDAH"
                     /coded_by="XM_061154881.1:446..1033"
                     /db_xref="GeneID:133064589"
ORIGIN      
        1 mklviighsi gsyfsleilk hapelpvirs illfptierm sespkgrfat pllcwlryal
       61 yvpcylllkp wpekikslvi rmalqmmdmp refsclntle pfclvnaayl gsqemrevvk
      121 rdnetikehl sklifyygtt dgwcpkqyyd dikkdfpegd irlcekkiph afilnffqev
      181 anmvadwlkd dlskm
//
LOCUS       XP_061010865             172 aa            linear   MAM 02-DEC-2023
DEFINITION  lipid droplet-associated hydrolase isoform X4 [Dama dama].
ACCESSION   XP_061010865
VERSION     XP_061010865.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154882.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..172
                     /product="lipid droplet-associated hydrolase isoform X4"
                     /calculated_mol_wt=19147
     Region          43..>156
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
     CDS             1..172
                     /gene="LDAH"
                     /coded_by="XM_061154882.1:229..747"
                     /db_xref="GeneID:133064589"
ORIGIN      
        1 mdseikeeip vheefilccg vetqvlkcgp wtdlinnqrg trpkllifii pgnpgfsafy
       61 vpfakalysa tkrrfpvwii shaghvlapr gkkilttsed pnaeevkdiy glrgqvehkl
      121 aflrtqvpke mklviighsi gsyfsleilk hapelparil ewvaisssrg ss
//
LOCUS       XP_061010867            4573 aa            linear   MAM 02-DEC-2023
DEFINITION  apolipoprotein B-100 [Dama dama].
ACCESSION   XP_061010867
VERSION     XP_061010867.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154884.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4573
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..4573
                     /product="apolipoprotein B-100"
                     /calculated_mol_wt=516236
     Region          43..594
                     /region_name="Vitellogenin_N"
                     /note="Lipoprotein amino terminal region; pfam01347"
                     /db_xref="CDD:460170"
     Region          629..934
                     /region_name="Vit_open_b-sht"
                     /note="Vitellinogen, open beta-sheet; pfam09172"
                     /db_xref="CDD:462702"
     Region          957..1068
                     /region_name="DUF1081"
                     /note="Domain of Unknown Function (DUF1081); pfam06448"
                     /db_xref="CDD:461916"
     Region          4502..4558
                     /region_name="ApoB100_C"
                     /note="Apolipoprotein B100 C terminal; pfam12491"
                     /db_xref="CDD:463606"
     CDS             1..4573
                     /gene="APOB"
                     /coded_by="XM_061154884.1:112..13833"
                     /db_xref="GeneID:133064591"
ORIGIN      
        1 mgaprpaprl llllllldaa saqardevle nvspscpkda trfkhlrkyv ynyeaesssg
       61 vpgtadsrss tkinckvele vpqlcnfilk tshctlkevy glnpegkall kktknseefa
      121 aamskydlkl avpeskqvll ypekeepkhi lnikrgiisa lllppeteea kqvlfldtvy
      181 gncstdftvk tkkgnvatei siernlekcd hfqpistgvs plalirgmtr plstligssq
      241 scrytldprr khvseaicne qhlflpfsyk nkygmmaqvt qtlkledtpk insrffeegt
      301 eavglafest rstsppkhae aivktlqelq klhvseqnaq ranlfhklvt elrglsseav
      361 tsllpkliev sspitlqali qcgqphcyth ilqwlknera npllidavty lvalipepsa
      421 erlrevfnta rvqqsrltfy alshminnyh ktnptwtqdl leiadylseq igndctgned
      481 ltylilrvig nigktmeqlt pklrssvlkc irseqpslvi qkaaiqalrk melsdevrev
      541 llqtflddss pgdkrlaayl mlmgspsqsd iskitqllpr eqneqvknfv ashianvlns
      601 edlyvrdlks lveealkksq lptvmdfkkf srnyqfskli slpsldpvsa kiegniifdp
      661 nnylpkesml kttlkvfgfa stdlfeigle gkgfeptlea lfgkegffpd svnkalywvn
      721 grvpdrvskv lvdhfgytkd dkreqdmvng imfnieklvk dlkskdfpea raylrilgee
      781 lgfvrlhdlq llgklllkgv htlqgipqmi kelvrkgsts dlflhyifmd nafelptglg
      841 lqlqvsssgi itpgikagvk levanmqael vtkpsvsvef vtnmgiiipd farsgvqmnt
      901 nffhetglea rivlkagqlk fiipspkrpv rlfsgsntlh lvsttkteai pplienrqsw
      961 stckpffigl nycitgaysn asstdsssyy pltgdtrfel elkptgeveq ysakafyelr
     1021 rdgealvdml klvtqtegvk qteatllfry nrqsktlsse lhipdfdvdl gtvlkvsyes
     1081 skekksyklt ldfqnkkite vtlaghisyd rreegkikgv isiprlqaea rseilslwsp
     1141 sklllqmdss ataygstisk kvawrydgek iefewntgtn vdtkkaasnf pvdlsgfpkt
     1201 lhayasilld rrvpqtdltf rhmgsklvaa astwlqetsr slpyaqkiqd qlsglqelcl
     1261 qkmelpnfhi pgnlflksdg rikytlnkns meieiplpfg gkssedlkmf ktiqtpalnf
     1321 qplgfhlpsq efqiptftip hlyplrlpll gvldlstsiy snlynwsasy tggntstdhw
     1381 slqaqyhvka dsvvdllsyh vqgsgkaayd hrntltlsgd gslhhkflds nvkfshvekr
     1441 gnnptsgllt fdassawgpq isasihldsk kkehlyvkev kidgqfrasa fyakgaydls
     1501 yqrdpatgql tgesnlrfns syvqgtnqit gryddgtvsi tstsdlqdgl vkntaslkye
     1561 nyeltlksdt sgkyedfats nkvdltfskq sallrseyqa dykslrfftl lsgslnshgl
     1621 elnadilgtd kinsgahkat lriardgmst samtslkysp lvlenelnaa vslsgaslkl
     1681 tsngrfrehh vkfsldgraa ptevslgsay qamilgvdsk nifhfrinqe glklsndmmg
     1741 sydemkldyt nnlnvagfsl dfsskldniy ssdkfykqnf nlqlepyslv ttlnsdlkfn
     1801 aldmtnsgkl rleplklnvg gtikgayqnd eikhiytlsy adlsasykad tvakvqgtef
     1861 shrlntniag lastvdistn ynsdslhfsn afrsavapft mtidthtngn gklvlwgqht
     1921 gqlyskfllk aeplaftfsh dyrgstshhl msrrsittal dhkvsalltl aeqtgdwklr
     1981 trldkneysq dfsayntrdk vgielsgral adltvldfpi avplvlsqsi nvidtlemrd
     2041 svgqpqeftl vasvkydknq nahtihlpff kflpkyfekt ravvigalea vqkelkrthi
     2101 dqhmrkyvaa ldrlsqqvnd ylstfswerq vlsakeklta ftenysmten dlqivldnak
     2161 inlneklsql qtyviqfdqy iednydlhdf kttiakiidq iieklkilde hyhirvnlvk
     2221 kirdlyffie nfdfnkigss taswiqnmdt kyqiriqiqe klqqlkvqiq tvdiqhlaem
     2281 fkqqieavdi rvlldqlrta ipfqrikeii ehvkycvtsl sdgfevteei nafrvmvhef
     2341 temykidqhi qalmdksvhl aqqyklqetv qklssvlqqv kmadlvekli gltnnalkql
     2401 ealsfnqfle evnrfldmlv kklksfdyqq fvvetnnkih evtqrindei qalelpqkak
     2461 afrllvedar imvstylenl katkitvfld wlqkalssts vtymktkfqe tledfrdriy
     2521 qmdirqelqr ylflvgqvyn tlityisdww vlaaknltdf aeqysiqdwa enlktlveqg
     2581 ftvpkiqttf gtipafeisl ralqeatyqt pdfiipltdl ripsfqinfk tlkdvkipss
     2641 fstpeftiln tlhipsftid fveikikiir tidqmlnsel qwpvpevylg dlsgvdtila
     2701 gitvpdfhlp eitipefvvp nlnltdfqvs dlhipefqlp hishtievpa fgklcgilki
     2761 qsplftldan adiqnatasa nqveieasit akgasrlevl nfdfqakaql sdpminplvl
     2821 kesmrfssky lktehesevl wagnavegks ntvagihtek ntlelsngvl ikvnnqltld
     2881 sntkylhkln ipqldfssqa dlhsdlktll eaghiawass gtaswklach efsdegthes
     2941 qssftveesi tsfrlsnkin skhlrvnqki lyesrflnfs kfeiqsqaec qhvgrsvlta
     3001 kglallqegk aeitgnhdah lngkvvgtlk nslffsaqpy emtastnneg nlrvsfplkl
     3061 tgkidflnny alflspsaqq aswqasgrfn qykyhqnfsa gnseksieah lgingeanld
     3121 flnipvtipe mtlpytnltt pqmkeislwe ktglkdflkt tkqsfdlsvr aqykknkdkl
     3181 sipvpldafy alihrninsf srlfqtvrnq aldffiksyn eakttfdkyk vkkslnqqpk
     3241 iykipgytip ianievspft vkmltfeymi pkeistpsit vlgsgiyvps ytlvlpflel
     3301 ptlhvprels elslpefkvl stinkilipa lgnitydfsf kssvitlntn vglynqsdiv
     3361 ahfltssssv mdalqykleg tssltrkrgl klatalsmsn rfvegnhdst vsftkknmda
     3421 svtttarvqi pilkmsfkqe lhgntkskpt vssaielkyn fnspkllsaa mgtvthkltl
     3481 esvtsyfsie sstkggvegs fgsrgysgsl aseastylns kgtrssvtlq gaskadglwd
     3541 lkvkenfage atlqriytiw eqnmknhlel ggliltsgeh tskatlelsl wkisaliqvr
     3601 ahqpssllki nflgqevsln vntenqkisw ksqvqvhsgs lqnniqlsnd qevarfdmav
     3661 sldgylwflk dtvlpvydks lwdllkldvt tslnrkqhlr aataliytkn pngylvsipm
     3721 qelddkfiip glkqnnqnsv hdtptfqvpf tdlqfpsytl dlseikiykk lstlpltfni
     3781 stlpkvkfpr vdvliqyskp eassvpffei tvpasqltvs hftlpksisv gstvldlnav
     3841 asniadfelp titvpeqtle ipsvkfsvpa gilipsfgtl tarfevaspl ynttwraglk
     3901 nkgdhvetfl dstcsstiqf leydlnvvgt hkieggmlvy ktnasfahrd fsaeyeedgk
     3961 yqglgywngk vdlnitsptl tdvrlhyqen enhfsssvas paigtvvvdv knisntllgw
     4021 nlyycpqasp dkilnifkme lrvlelddkv qikanweeea vsellsslkd nvpratgaly
     4081 dyvnkyhqey tgldlkdasl klrrglqdsa dqvyqgamrq idevdmklrs margttetyq
     4141 qwkdkaqhly rellaqkdhs glqrlqqnvs dsligvtqgy tvtvkratdl lidllnvtrf
     4201 qlpgrarnyt adelctvviq eiakrlsqvh snihnglhil fsyflylmee selykdlnhk
     4261 fsfppvsnql igmvleymkt liffsqeiqk alsylqstmm temlsnlqrs lqdifqeies
     4321 elkcfkekkl tdlvnqtlqn intvfdiyis fvftslkenl dynfvefnel tqnklqeasq
     4381 elqqlhqyvq alhqeyfdpt mvgwtvkyye feekiinlik nlvdvlkdrh skytvgaadf
     4441 asqlssqiep liekdlqeyl siladaeerg kekitelsts aqevikswav avkeiisdyh
     4501 qqftyklqef sdqlsdycek fisesrrlid lsiqnyhmfl nyimellkel qsatvndmsp
     4561 yikvapgeft itf
//
LOCUS       XP_061010868             875 aa            linear   MAM 02-DEC-2023
DEFINITION  kelch-like protein 29 isoform X1 [Dama dama].
ACCESSION   XP_061010868
VERSION     XP_061010868.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154885.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..875
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..875
                     /product="kelch-like protein 29 isoform X1"
                     /calculated_mol_wt=93986
     Region          <50..290
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          312..438
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          333..860
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          432..533
                     /region_name="BACK_KLHL29_KBTBD9"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     Kelch-like protein 29 (KLHL29); cd18468"
                     /db_xref="CDD:350543"
     Region          577..621
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          626..669
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          673..716
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          720..808
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          811..857
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..875
                     /gene="KLHL29"
                     /coded_by="XM_061154885.1:420..3047"
                     /db_xref="GeneID:133064593"
ORIGIN      
        1 msrhhsrfer dyrvgwdrre wsangthgtt sicsatagag gssasslsar pgllplpvgp
       61 srlptpatap tpcttgsgea itslvasstp atttkapgis kadnqsqglt tsirwgqtpi
      121 nqstpwdtde ppskqmresd npgtgpwvtt vaagsqpali ahsygvaqpp tfspavnvqa
      181 pvigvtpslp phvgpqlplm pghyslpqpp sqplssvvvn mpaqalyasp qplavstlpg
      241 vgqvarpgpt avgnghmagp llpppppaqp satlpsgapa tngpptsdsa hglqmlrtig
      301 vgkyeftdpg hpkemlkeln qqrrakaftd lkivvegref evhqnvlasc slyfkdliqr
      361 svqdgsqcgr eklelvlsnl qadvlellle fvytgslvid sanaktllea askfqfhtfc
      421 kvcvsflekq ltasnclgvl amaeamqcse lyhmakafal qifpevaaqe eilsiskddf
      481 iayisndsln tkaeelvyet vikwikkdpv sraqyaaell avvrlpfihp syllnvvdne
      541 eliksseacr dlvneakryh mlpharqemq tprtrprlsa gvaevivlvg grqmvgmtqr
      601 slvavtcwnp qnnkwyplas lpfydreffs vvsagdniyl sggmesgvtl advwcymsll
      661 dnwnlvsrmt vprcrhnslv ydgkiytlgg lgvagnvdhv erydtitnqw eavaplpkav
      721 hsaaatvcgg kiyvfggvne agraagvlqs yvpqtntwsf iespmidnky apavtlngfv
      781 filggayara ttiydpdkgn ikagpnmnhs rqfcsavvld gkiyatggiv ssegpalgnm
      841 eayepatntw tllphmpcpv frhgcvvikk yiqsg
//
LOCUS       XP_061010869             814 aa            linear   MAM 02-DEC-2023
DEFINITION  kelch-like protein 29 isoform X2 [Dama dama].
ACCESSION   XP_061010869
VERSION     XP_061010869.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154886.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..814
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..814
                     /product="kelch-like protein 29 isoform X2"
                     /calculated_mol_wt=87208
     Region          <50..290
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          312..438
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          333..800
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          432..533
                     /region_name="BACK_KLHL29_KBTBD9"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     Kelch-like protein 29 (KLHL29); cd18468"
                     /db_xref="CDD:350543"
     Region          612..655
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          659..747
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          750..796
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..814
                     /gene="KLHL29"
                     /coded_by="XM_061154886.1:172..2616"
                     /db_xref="GeneID:133064593"
ORIGIN      
        1 msrhhsrfer dyrvgwdrre wsangthgtt sicsatagag gssasslsar pgllplpvgp
       61 srlptpatap tpcttgsgea itslvasstp atttkapgis kadnqsqglt tsirwgqtpi
      121 nqstpwdtde ppskqmresd npgtgpwvtt vaagsqpali ahsygvaqpp tfspavnvqa
      181 pvigvtpslp phvgpqlplm pghyslpqpp sqplssvvvn mpaqalyasp qplavstlpg
      241 vgqvarpgpt avgnghmagp llpppppaqp satlpsgapa tngpptsdsa hglqmlrtig
      301 vgkyeftdpg hpkemlkeln qqrrakaftd lkivvegref evhqnvlasc slyfkdliqr
      361 svqdgsqcgr eklelvlsnl qadvlellle fvytgslvid sanaktllea askfqfhtfc
      421 kvcvsflekq ltasnclgvl amaeamqcse lyhmakafal qifpevaaqe eilsiskddf
      481 iayisndsln tkaeelvyet vikwikkdpv sraqyaaell avvrlpfihp syllnvvdne
      541 eliksseacr dlvneakryh mlpharqemq tprtrprlsa ggmesgvtla dvwcymslld
      601 nwnlvsrmtv prcrhnslvy dgkiytlggl gvagnvdhve rydtitnqwe avaplpkavh
      661 saaatvcggk iyvfggvnea graagvlqsy vpqtntwsfi espmidnkya pavtlngfvf
      721 ilggayarat tiydpdkgni kagpnmnhsr qfcsavvldg kiyatggivs segpalgnme
      781 ayepatntwt llphmpcpvf rhgcvvikky iqsg
//
LOCUS       XP_061010870             875 aa            linear   MAM 02-DEC-2023
DEFINITION  kelch-like protein 29 isoform X1 [Dama dama].
ACCESSION   XP_061010870
VERSION     XP_061010870.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154887.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..875
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..875
                     /product="kelch-like protein 29 isoform X1"
                     /calculated_mol_wt=93986
     Region          <50..290
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          312..438
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          333..860
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          432..533
                     /region_name="BACK_KLHL29_KBTBD9"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     Kelch-like protein 29 (KLHL29); cd18468"
                     /db_xref="CDD:350543"
     Region          577..621
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          626..669
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          673..716
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          720..808
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          811..857
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..875
                     /gene="KLHL29"
                     /coded_by="XM_061154887.1:417..3044"
                     /db_xref="GeneID:133064593"
ORIGIN      
        1 msrhhsrfer dyrvgwdrre wsangthgtt sicsatagag gssasslsar pgllplpvgp
       61 srlptpatap tpcttgsgea itslvasstp atttkapgis kadnqsqglt tsirwgqtpi
      121 nqstpwdtde ppskqmresd npgtgpwvtt vaagsqpali ahsygvaqpp tfspavnvqa
      181 pvigvtpslp phvgpqlplm pghyslpqpp sqplssvvvn mpaqalyasp qplavstlpg
      241 vgqvarpgpt avgnghmagp llpppppaqp satlpsgapa tngpptsdsa hglqmlrtig
      301 vgkyeftdpg hpkemlkeln qqrrakaftd lkivvegref evhqnvlasc slyfkdliqr
      361 svqdgsqcgr eklelvlsnl qadvlellle fvytgslvid sanaktllea askfqfhtfc
      421 kvcvsflekq ltasnclgvl amaeamqcse lyhmakafal qifpevaaqe eilsiskddf
      481 iayisndsln tkaeelvyet vikwikkdpv sraqyaaell avvrlpfihp syllnvvdne
      541 eliksseacr dlvneakryh mlpharqemq tprtrprlsa gvaevivlvg grqmvgmtqr
      601 slvavtcwnp qnnkwyplas lpfydreffs vvsagdniyl sggmesgvtl advwcymsll
      661 dnwnlvsrmt vprcrhnslv ydgkiytlgg lgvagnvdhv erydtitnqw eavaplpkav
      721 hsaaatvcgg kiyvfggvne agraagvlqs yvpqtntwsf iespmidnky apavtlngfv
      781 filggayara ttiydpdkgn ikagpnmnhs rqfcsavvld gkiyatggiv ssegpalgnm
      841 eayepatntw tllphmpcpv frhgcvvikk yiqsg
//
LOCUS       XP_061010871            1458 aa            linear   MAM 02-DEC-2023
DEFINITION  ATPase family AAA domain-containing protein 2B isoform X1 [Dama
            dama].
ACCESSION   XP_061010871
VERSION     XP_061010871.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154888.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1458
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1458
                     /product="ATPase family AAA domain-containing protein 2B
                     isoform X1"
                     /calculated_mol_wt=164591
     Region          401..570
                     /region_name="RecA-like_Yta7-like"
                     /note="ATPase domain of Saccharomyces cerevisiae Yta7 and
                     similar ATPase domains; cd19517"
                     /db_xref="CDD:410925"
     Site            order(446..449,452,505,549)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:410925"
     Region          595..635
                     /region_name="AAA_lid_3"
                     /note="AAA+ lid domain; pfam17862"
                     /db_xref="CDD:465537"
     Region          759..895
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            order(778..779,781,798,800..801,834..835)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:410865"
     Region          852..>1086
                     /region_name="COG5076"
                     /note="Transcription factor involved in chromatin
                     remodeling, contains bromodomain [Chromatin structure and
                     dynamics / Transcription]"
                     /db_xref="CDD:227408"
     Region          960..1071
                     /region_name="Bromo_AAA"
                     /note="Bromodomain; sub-family co-occurring with AAA
                     domains. Bromodomains are 110 amino acid long domains,
                     that are found in many chromatin associated proteins.
                     Bromodomains can interact specifically with acetylated
                     lysine. The structure(2DKW) in this...; cd05528"
                     /db_xref="CDD:99957"
     Site            order(987,992,995,1034,1038,1048)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99957"
     CDS             1..1458
                     /gene="ATAD2B"
                     /coded_by="XM_061154888.1:321..4697"
                     /db_xref="GeneID:133064594"
ORIGIN      
        1 mvntrksslr llgskspgpg pgpgagvesg atggsshfis srtrssktra ascpaakagg
       61 sggagvalde arkaeadgtl sdshvsppak rtlkqpdsvc kdksksrttg qreewnissg
      121 qarltsqpga tlpnghssls lrshphrgek kgdgdlscis gdmevrkscr srknrfesvn
      181 qsllfdqlvn staeavlqem dninirrnrr sgeverlrmw tdtefenmdm ysrvkrrrks
      241 lrrnsygiqn hhevstegee eesqeedgdi eaeeaegeen drpynlrqrk tvdryqappi
      301 vpahqkkren tlfdihrspa rrshirrkkh aihssdttss deerferrks ksmararnrc
      361 lpmnlraedl asgilrervk vgasladvdp mnidksvrfd sigglshhih alkemvvfpl
      421 lypeifekfk iqpprgclfy gppgtgktlv aralanecsq gdkkvaffmr kgadclskwv
      481 geserqlrll fdqaylmrps iiffdeidgl apvrssrqdq ihssivstll almdgldnrg
      541 eivvigatnr ldsidpalrr pgrfdreflf nlpdqkarkh ilqihtrdwn pklsdaflge
      601 laekcvgycg adikalctea alialrrryp qiyasshklq ldvssivlna qdfyhamqni
      661 vpasqravms sghalspiik pllersfnni lavlqkvfph aeisqsdkke dietlildds
      721 edenalsife tschsgspkk qssaaavhkp ylhftmspyh qptsyrprll lsgergsgqt
      781 shlapallht lekfsvhrld lpalysvsak tpeescaqif rearrtvpsi vymphigdww
      841 eavsetvrat fltllqdips fspifllsts etmyselpee vkcifriqye evlyiqrpie
      901 edrrkffqel ilnqasmapp rrkhtglcam evlplalpsp prqlseseki rmedqeentl
      961 relrlflrdv tkrlatdkrf nifskpvdie evsdylevik epmdlstvit kidkhnylta
     1021 kdflkdidli csnaleynpd kdpgdkiirh ractlkdtah aiiaaeldpe fnklceeike
     1081 arikrglsvt veqinphgtg arktetrvee afrhkqrnpm dvwhsstnkc afrvrrksrr
     1141 rsqwgkgiik krkvnnlkkd eedtkftdye nhmedrklle ngefevstdc heengeetgd
     1201 lsmtndessc dimdmdqgqr lnngastken fasteeessn esllinssns lnpeqtsqke
     1261 pflkggclng eastdsfegi pvlecqngka evvsccgsgy kcsseqktll edqskekpet
     1321 snenhgddpe klealecstn eklepgpdve vkdaeldkeg askvkkyrkl ileqakttsl
     1381 elvpeepsep vpplivdher lkklldllvd ksnnlavdql erlysllsqc iyrhrkdydk
     1441 sqlieemert vhmfetfl
//
LOCUS       XP_061010872            1453 aa            linear   MAM 02-DEC-2023
DEFINITION  ATPase family AAA domain-containing protein 2B isoform X2 [Dama
            dama].
ACCESSION   XP_061010872
VERSION     XP_061010872.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154889.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1453
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1453
                     /product="ATPase family AAA domain-containing protein 2B
                     isoform X2"
                     /calculated_mol_wt=164005
     Region          401..570
                     /region_name="RecA-like_Yta7-like"
                     /note="ATPase domain of Saccharomyces cerevisiae Yta7 and
                     similar ATPase domains; cd19517"
                     /db_xref="CDD:410925"
     Site            order(446..449,452,505,549)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:410925"
     Region          595..635
                     /region_name="AAA_lid_3"
                     /note="AAA+ lid domain; pfam17862"
                     /db_xref="CDD:465537"
     Region          759..895
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            order(778..779,781,798,800..801,834..835)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:410865"
     Region          852..>1081
                     /region_name="COG5076"
                     /note="Transcription factor involved in chromatin
                     remodeling, contains bromodomain [Chromatin structure and
                     dynamics / Transcription]"
                     /db_xref="CDD:227408"
     Region          960..1066
                     /region_name="Bromo_AAA"
                     /note="Bromodomain; sub-family co-occurring with AAA
                     domains. Bromodomains are 110 amino acid long domains,
                     that are found in many chromatin associated proteins.
                     Bromodomains can interact specifically with acetylated
                     lysine. The structure(2DKW) in this...; cd05528"
                     /db_xref="CDD:99957"
     Site            order(987,990,1029,1033,1043)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99957"
     CDS             1..1453
                     /gene="ATAD2B"
                     /coded_by="XM_061154889.1:321..4682"
                     /db_xref="GeneID:133064594"
ORIGIN      
        1 mvntrksslr llgskspgpg pgpgagvesg atggsshfis srtrssktra ascpaakagg
       61 sggagvalde arkaeadgtl sdshvsppak rtlkqpdsvc kdksksrttg qreewnissg
      121 qarltsqpga tlpnghssls lrshphrgek kgdgdlscis gdmevrkscr srknrfesvn
      181 qsllfdqlvn staeavlqem dninirrnrr sgeverlrmw tdtefenmdm ysrvkrrrks
      241 lrrnsygiqn hhevstegee eesqeedgdi eaeeaegeen drpynlrqrk tvdryqappi
      301 vpahqkkren tlfdihrspa rrshirrkkh aihssdttss deerferrks ksmararnrc
      361 lpmnlraedl asgilrervk vgasladvdp mnidksvrfd sigglshhih alkemvvfpl
      421 lypeifekfk iqpprgclfy gppgtgktlv aralanecsq gdkkvaffmr kgadclskwv
      481 geserqlrll fdqaylmrps iiffdeidgl apvrssrqdq ihssivstll almdgldnrg
      541 eivvigatnr ldsidpalrr pgrfdreflf nlpdqkarkh ilqihtrdwn pklsdaflge
      601 laekcvgycg adikalctea alialrrryp qiyasshklq ldvssivlna qdfyhamqni
      661 vpasqravms sghalspiik pllersfnni lavlqkvfph aeisqsdkke dietlildds
      721 edenalsife tschsgspkk qssaaavhkp ylhftmspyh qptsyrprll lsgergsgqt
      781 shlapallht lekfsvhrld lpalysvsak tpeescaqif rearrtvpsi vymphigdww
      841 eavsetvrat fltllqdips fspifllsts etmyselpee vkcifriqye evlyiqrpie
      901 edrrkffqel ilnqasmapp rrkhtglcam evlplalpsp prqlseseki rmedqeentl
      961 relrlflrdv tkrlatdkrf nifskpvsdy levikepmdl stvitkidkh nyltakdflk
     1021 didlicsnal eynpdkdpgd kiirhractl kdtahaiiaa eldpefnklc eeikearikr
     1081 glsvtveqin phgtgarkte trveeafrhk qrnpmdvwhs stnkcafrvr rksrrrsqwg
     1141 kgiikkrkvn nlkkdeedtk ftdyenhmed rkllengefe vstdcheeng eetgdlsmtn
     1201 desscdimdm dqgqrlnnga stkenfaste eessneslli nssnslnpeq tsqkepflkg
     1261 gclngeastd sfegipvlec qngkaevvsc cgsgykcsse qktlledqsk ekpetsnenh
     1321 gddpekleal ecstneklep gpdvevkdae ldkegaskvk kyrklileqa kttslelvpe
     1381 epsepvppli vdherlkkll dllvdksnnl avdqlerlys llsqciyrhr kdydksqlie
     1441 emertvhmfe tfl
//
LOCUS       XP_061010873            1397 aa            linear   MAM 02-DEC-2023
DEFINITION  ATPase family AAA domain-containing protein 2B isoform X3 [Dama
            dama].
ACCESSION   XP_061010873
VERSION     XP_061010873.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154890.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1397
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1397
                     /product="ATPase family AAA domain-containing protein 2B
                     isoform X3"
                     /calculated_mol_wt=158936
     Region          340..509
                     /region_name="RecA-like_Yta7-like"
                     /note="ATPase domain of Saccharomyces cerevisiae Yta7 and
                     similar ATPase domains; cd19517"
                     /db_xref="CDD:410925"
     Site            order(385..388,391,444,488)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:410925"
     Region          534..574
                     /region_name="AAA_lid_3"
                     /note="AAA+ lid domain; pfam17862"
                     /db_xref="CDD:465537"
     Region          698..834
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            order(717..718,720,737,739..740,773..774)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:410865"
     Region          791..>1025
                     /region_name="COG5076"
                     /note="Transcription factor involved in chromatin
                     remodeling, contains bromodomain [Chromatin structure and
                     dynamics / Transcription]"
                     /db_xref="CDD:227408"
     Region          899..1010
                     /region_name="Bromo_AAA"
                     /note="Bromodomain; sub-family co-occurring with AAA
                     domains. Bromodomains are 110 amino acid long domains,
                     that are found in many chromatin associated proteins.
                     Bromodomains can interact specifically with acetylated
                     lysine. The structure(2DKW) in this...; cd05528"
                     /db_xref="CDD:99957"
     Site            order(926,931,934,973,977,987)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99957"
     CDS             1..1397
                     /gene="ATAD2B"
                     /coded_by="XM_061154890.1:60..4253"
                     /db_xref="GeneID:133064594"
ORIGIN      
        1 mqveapvsll qkaeadgtls dshvsppakr tlkqpdsvck dksksrttgq reewnissgq
       61 arltsqpgat lpnghsslsl rshphrgekk gdgdlscisg dmevrkscrs rknrfesvnq
      121 sllfdqlvns taeavlqemd ninirrnrrs geverlrmwt dtefenmdmy srvkrrrksl
      181 rrnsygiqnh hevstegeee esqeedgdie aeeaegeend rpynlrqrkt vdryqappiv
      241 pahqkkrent lfdihrspar rshirrkkha ihssdttssd eerferrksk smararnrcl
      301 pmnlraedla sgilrervkv gasladvdpm nidksvrfds igglshhiha lkemvvfpll
      361 ypeifekfki qpprgclfyg ppgtgktlva ralanecsqg dkkvaffmrk gadclskwvg
      421 eserqlrllf dqaylmrpsi iffdeidgla pvrssrqdqi hssivstlla lmdgldnrge
      481 ivvigatnrl dsidpalrrp grfdreflfn lpdqkarkhi lqihtrdwnp klsdaflgel
      541 aekcvgycga dikalcteaa lialrrrypq iyasshklql dvssivlnaq dfyhamqniv
      601 pasqravmss ghalspiikp llersfnnil avlqkvfpha eisqsdkked ietlilddse
      661 denalsifet schsgspkkq ssaaavhkpy lhftmspyhq ptsyrprlll sgergsgqts
      721 hlapallhtl ekfsvhrldl palysvsakt peescaqifr earrtvpsiv ymphigdwwe
      781 avsetvratf ltllqdipsf spifllstse tmyselpeev kcifriqyee vlyiqrpiee
      841 drrkffqeli lnqasmappr rkhtglcame vlplalpspp rqlsesekir medqeentlr
      901 elrlflrdvt krlatdkrfn ifskpvdiee vsdylevike pmdlstvitk idkhnyltak
      961 dflkdidlic snaleynpdk dpgdkiirhr actlkdtaha iiaaeldpef nklceeikea
     1021 rikrglsvtv eqinphgtga rktetrveea frhkqrnpmd vwhsstnkca frvrrksrrr
     1081 sqwgkgiikk rkvnnlkkde edtkftdyen hmedrkllen gefevstdch eengeetgdl
     1141 smtndesscd imdmdqgqrl nngastkenf asteeessne sllinssnsl npeqtsqkep
     1201 flkggclnge astdsfegip vlecqngkae vvsccgsgyk csseqktlle dqskekpets
     1261 nenhgddpek lealecstne klepgpdvev kdaeldkega skvkkyrkli leqakttsle
     1321 lvpeepsepv pplivdherl kklldllvdk snnlavdqle rlysllsqci yrhrkdydks
     1381 qlieemertv hmfetfl
//
LOCUS       XP_061010874             499 aa            linear   MAM 02-DEC-2023
DEFINITION  sphingosine-1-phosphate transporter MFSD2B isoform X1 [Dama dama].
ACCESSION   XP_061010874
VERSION     XP_061010874.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154891.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..499
                     /product="sphingosine-1-phosphate transporter MFSD2B
                     isoform X1"
                     /calculated_mol_wt=53429
     Region          41..480
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(51..52,55..56,59,92,153..154,156..158,161,182,
                     185..186,189,287,290..291,294..296,299,327,331,378..379,
                     383,387,412,415..416,419..420,423)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:341010"
     CDS             1..499
                     /gene="MFSD2B"
                     /coded_by="XM_061154891.1:68..1567"
                     /db_xref="GeneID:133064595"
ORIGIN      
        1 mavyreaipg psletpspsp eahssaqgsd sgaghlsfyr klcygiggvp nqvassaiaf
       61 ylqlflldva qipaaqvslv lfggkvsgaa adplagflin rsrrtgsgrl mpwvlgctpf
      121 ialayfflwf lppfstlrgl wyttlyclfq alatffqvpy taltmlltpn pkerdsatay
      181 rmtlemvgtl mgatvhgliv sgahgshrck edmlpgevav spnatrlyfi aaavvaltyp
      241 vcstllylgv keqsdpstqa sgqglgfltg lgltvrhrpy lklvisflfi saavqveqsy
      301 lvlfcthasq lqdhvqgmvl tilvsavlst pmwewvlqrf gkrmsalgic amvpfailla
      361 avpmvpvayv vafvsglsia vslllpwsml pdvvddfqlq hqhgpgleti fyssyvfftk
      421 lsgagalgis tlsldfagye sgacrqseqv vvtlkvliga vptsmiligl cilmvgptpk
      481 vpsransrsl grrtsytla
//
LOCUS       XP_061010875             412 aa            linear   MAM 02-DEC-2023
DEFINITION  sphingosine-1-phosphate transporter MFSD2B isoform X2 [Dama dama].
ACCESSION   XP_061010875
VERSION     XP_061010875.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154892.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..412
                     /product="sphingosine-1-phosphate transporter MFSD2B
                     isoform X2"
                     /calculated_mol_wt=43380
     Region          <168..393
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     CDS             1..412
                     /gene="MFSD2B"
                     /coded_by="XM_061154892.1:1269..2507"
                     /db_xref="GeneID:133064595"
ORIGIN      
        1 mwalaffpsg nsprrtsrll vfpraaprpg rvgrpapprr arsageppsp raragdntpr
       61 lgalaavrdg rvprgdpgpv sgdavalsgs tqlssgfvlp galhgadhaa dpkpqgaglg
      121 hcvpddlgdg gdadgshrpr thrvwctrvp qvqgghapwg ggclpqrdps tqasgqglgf
      181 ltglgltvrh rpylklvisf lfisaavqve qsylvlfcth asqlqdhvqg mvltilvsav
      241 lstpmwewvl qrfgkrmsal gicamvpfai llaavpmvpv ayvvafvsgl siavslllpw
      301 smlpdvvddf qlqhqhgpgl etifyssyvf ftklsgagal gistlsldfa gyesgacrqs
      361 eqvvvtlkvl igavptsmil iglcilmvgp tpkvpsrans rslgrrtsyt la
//
LOCUS       XP_061010876             410 aa            linear   MAM 02-DEC-2023
DEFINITION  sphingosine-1-phosphate transporter MFSD2B isoform X3 [Dama dama].
ACCESSION   XP_061010876
VERSION     XP_061010876.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154893.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..410
                     /product="sphingosine-1-phosphate transporter MFSD2B
                     isoform X3"
                     /calculated_mol_wt=42452
     Region          <297..391
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     CDS             1..410
                     /gene="MFSD2B"
                     /coded_by="XM_061154893.1:1269..2501"
                     /db_xref="GeneID:133064595"
ORIGIN      
        1 mwalaffpsg nsprrtsrll vfpraaprpg rvgrpapprr arsageppsp raragdntpr
       61 lgalaavrdg rvprgdpgpv sgdavalsgs tqlssgfvlp galhgadhaa dpkpqgaglg
      121 hcvpddlgdg gdadgshrpr thrvwctrvp qvqgghapwg ggclpqrdss llhcsrcgcf
      181 dlpsvqyfal pggegairpl hpsiwpgpgl pdwagshgpa salseaghll plhlsscsgg
      241 aelpgpvlyt rlpasrprpg hgadhpglgs aehpdvgvgs aaiweedvsp rdlspaprsm
      301 lpdvvddfql qhqhgpglet ifyssyvfft klsgagalgi stlsldfagy esgacrqseq
      361 vvvtlkvlig avptsmilig lcilmvgptp kvpsransrs lgrrtsytla
//
LOCUS       XP_061010877             316 aa            linear   MAM 02-DEC-2023
DEFINITION  UBX domain-containing protein 2A isoform X1 [Dama dama].
ACCESSION   XP_061010877
VERSION     XP_061010877.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154894.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..316
                     /product="UBX domain-containing protein 2A isoform X1"
                     /calculated_mol_wt=35601
     Region          123..196
                     /region_name="SEP"
                     /note="SEP domain; pfam08059"
                     /db_xref="CDD:462348"
     Region          225..308
                     /region_name="UBX_UBXN2A"
                     /note="Ubiquitin regulatory domain X (UBX) found in UBX
                     domain protein 2A (UBXN2A) and similar proteins; cd17160"
                     /db_xref="CDD:340680"
     Site            order(233,235,237..238,241..242,244,278..279,281,297..300,
                     302,304)
                     /site_type="other"
                     /note="putative UBX-p97 interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:340680"
     CDS             1..316
                     /gene="UBXN2A"
                     /coded_by="XM_061154894.1:227..1177"
                     /db_xref="GeneID:133064597"
ORIGIN      
        1 mqtrsaeirs isvwggaflv kqkrmkevdn lesikeewvc etgsdhqpls dsqqtnceyf
       61 vdslfeeaqk vgakclspte qkkqgvksek kvkslnrvrl cdpvdcslqg fsirgilqvd
      121 vsiklwkngf tvnddfrsys dgasqqflns ikkgelplel qgvfdkeevd vkvedkknei
      181 cmstkpvfqp fsgqghrlgs atpkivskak nievenknkl stvplnnlep itniqiwlan
      241 gkrivqkfni shrishikdf iekyqgsqrs ppfslatalp flklldetlt leeadlqnav
      301 iiqrlkktae pfkels
//
LOCUS       XP_061010878             311 aa            linear   MAM 02-DEC-2023
DEFINITION  UBX domain-containing protein 2A isoform X2 [Dama dama].
ACCESSION   XP_061010878
VERSION     XP_061010878.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154895.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..311
                     /product="UBX domain-containing protein 2A isoform X2"
                     /calculated_mol_wt=35221
     Region          118..191
                     /region_name="SEP"
                     /note="SEP domain; pfam08059"
                     /db_xref="CDD:462348"
     Region          220..303
                     /region_name="UBX_UBXN2A"
                     /note="Ubiquitin regulatory domain X (UBX) found in UBX
                     domain protein 2A (UBXN2A) and similar proteins; cd17160"
                     /db_xref="CDD:340680"
     Site            order(228,230,232..233,236..237,239,273..274,276,292..295,
                     297,299)
                     /site_type="other"
                     /note="putative UBX-p97 interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:340680"
     CDS             1..311
                     /gene="UBXN2A"
                     /coded_by="XM_061154895.1:5452..6387"
                     /db_xref="GeneID:133064597"
ORIGIN      
        1 msssftehrl tfwsikqkrm kevdnlesik eewvcetgsd hqplsdsqqt nceyfvdslf
       61 eeaqkvgakc lspteqkkqg vksekkvksl nrvrlcdpvd cslqgfsirg ilqvdvsikl
      121 wkngftvndd frsysdgasq qflnsikkge lplelqgvfd keevdvkved kkneicmstk
      181 pvfqpfsgqg hrlgsatpki vskaknieve nknklstvpl nnlepitniq iwlangkriv
      241 qkfnishris hikdfiekyq gsqrsppfsl atalpflkll detltleead lqnaviiqrl
      301 kktaepfkel s
//
LOCUS       XP_061010880             311 aa            linear   MAM 02-DEC-2023
DEFINITION  UBX domain-containing protein 2A isoform X2 [Dama dama].
ACCESSION   XP_061010880
VERSION     XP_061010880.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154897.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..311
                     /product="UBX domain-containing protein 2A isoform X2"
                     /calculated_mol_wt=35221
     Region          118..191
                     /region_name="SEP"
                     /note="SEP domain; pfam08059"
                     /db_xref="CDD:462348"
     Region          220..303
                     /region_name="UBX_UBXN2A"
                     /note="Ubiquitin regulatory domain X (UBX) found in UBX
                     domain protein 2A (UBXN2A) and similar proteins; cd17160"
                     /db_xref="CDD:340680"
     Site            order(228,230,232..233,236..237,239,273..274,276,292..295,
                     297,299)
                     /site_type="other"
                     /note="putative UBX-p97 interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:340680"
     CDS             1..311
                     /gene="UBXN2A"
                     /coded_by="XM_061154897.1:549..1484"
                     /db_xref="GeneID:133064597"
ORIGIN      
        1 msssftehrl tfwsikqkrm kevdnlesik eewvcetgsd hqplsdsqqt nceyfvdslf
       61 eeaqkvgakc lspteqkkqg vksekkvksl nrvrlcdpvd cslqgfsirg ilqvdvsikl
      121 wkngftvndd frsysdgasq qflnsikkge lplelqgvfd keevdvkved kkneicmstk
      181 pvfqpfsgqg hrlgsatpki vskaknieve nknklstvpl nnlepitniq iwlangkriv
      241 qkfnishris hikdfiekyq gsqrsppfsl atalpflkll detltleead lqnaviiqrl
      301 kktaepfkel s
//
LOCUS       XP_061010881             292 aa            linear   MAM 02-DEC-2023
DEFINITION  UBX domain-containing protein 2A isoform X3 [Dama dama].
ACCESSION   XP_061010881
VERSION     XP_061010881.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154898.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..292
                     /product="UBX domain-containing protein 2A isoform X3"
                     /calculated_mol_wt=32870
     Region          99..172
                     /region_name="SEP"
                     /note="SEP domain; pfam08059"
                     /db_xref="CDD:462348"
     Region          201..284
                     /region_name="UBX_UBXN2A"
                     /note="Ubiquitin regulatory domain X (UBX) found in UBX
                     domain protein 2A (UBXN2A) and similar proteins; cd17160"
                     /db_xref="CDD:340680"
     Site            order(209,211,213..214,217..218,220,254..255,257,273..276,
                     278,280)
                     /site_type="other"
                     /note="putative UBX-p97 interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:340680"
     CDS             1..292
                     /gene="UBXN2A"
                     /coded_by="XM_061154898.1:518..1396"
                     /db_xref="GeneID:133064597"
ORIGIN      
        1 mkevdnlesi keewvcetgs dhqplsdsqq tnceyfvdsl feeaqkvgak clspteqkkq
       61 gvksekkvks lnrvrlcdpv dcslqgfsir gilqvdvsik lwkngftvnd dfrsysdgas
      121 qqflnsikkg elplelqgvf dkeevdvkve dkkneicmst kpvfqpfsgq ghrlgsatpk
      181 ivskakniev enknklstvp lnnlepitni qiwlangkri vqkfnishri shikdfieky
      241 qgsqrsppfs latalpflkl ldetltleea dlqnaviiqr lkktaepfke ls
//
LOCUS       XP_061010882             282 aa            linear   MAM 02-DEC-2023
DEFINITION  UBX domain-containing protein 2A isoform X4 [Dama dama].
ACCESSION   XP_061010882
VERSION     XP_061010882.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154899.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..282
                     /product="UBX domain-containing protein 2A isoform X4"
                     /calculated_mol_wt=31844
     Region          89..162
                     /region_name="SEP"
                     /note="SEP domain; pfam08059"
                     /db_xref="CDD:462348"
     Region          191..274
                     /region_name="UBX_UBXN2A"
                     /note="Ubiquitin regulatory domain X (UBX) found in UBX
                     domain protein 2A (UBXN2A) and similar proteins; cd17160"
                     /db_xref="CDD:340680"
     Site            order(199,201,203..204,207..208,210,244..245,247,263..266,
                     268,270)
                     /site_type="other"
                     /note="putative UBX-p97 interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:340680"
     CDS             1..282
                     /gene="UBXN2A"
                     /coded_by="XM_061154899.1:224..1072"
                     /db_xref="GeneID:133064597"
ORIGIN      
        1 mqtrsaeirs isvwggaflv kqkrmkevdn lesikeewvc etgsdhqpls dsqqtnceyf
       61 vdslfeeaqk vgakclspte qkkqvdvsik lwkngftvnd dfrsysdgas qqflnsikkg
      121 elplelqgvf dkeevdvkve dkkneicmst kpvfqpfsgq ghrlgsatpk ivskakniev
      181 enknklstvp lnnlepitni qiwlangkri vqkfnishri shikdfieky qgsqrsppfs
      241 latalpflkl ldetltleea dlqnaviiqr lkktaepfke ls
//
LOCUS       XP_061010883             263 aa            linear   MAM 02-DEC-2023
DEFINITION  UBX domain-containing protein 2A isoform X5 [Dama dama].
ACCESSION   XP_061010883
VERSION     XP_061010883.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154900.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..263
                     /product="UBX domain-containing protein 2A isoform X5"
                     /calculated_mol_wt=29666
     Region          123..196
                     /region_name="SEP"
                     /note="SEP domain; pfam08059"
                     /db_xref="CDD:462348"
     Region          <200..255
                     /region_name="Ubl1_cv_Nsp3_N-like"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; cl28922"
                     /db_xref="CDD:475130"
     CDS             1..263
                     /gene="UBXN2A"
                     /coded_by="XM_061154900.1:225..1016"
                     /db_xref="GeneID:133064597"
ORIGIN      
        1 mqtrsaeirs isvwggaflv kqkrmkevdn lesikeewvc etgsdhqpls dsqqtnceyf
       61 vdslfeeaqk vgakclspte qkkqgvksek kvkslnrvrl cdpvdcslqg fsirgilqvd
      121 vsiklwkngf tvnddfrsys dgasqqflns ikkgelplel qgvfdkeevd vkvedkknei
      181 cmstkpvfqp fsgqghrlgr ishikdfiek yqgsqrsppf slatalpflk lldetltlee
      241 adlqnaviiq rlkktaepfk els
//
LOCUS       XP_061010884             229 aa            linear   MAM 02-DEC-2023
DEFINITION  UBX domain-containing protein 2A isoform X6 [Dama dama].
ACCESSION   XP_061010884
VERSION     XP_061010884.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154901.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..229
                     /product="UBX domain-containing protein 2A isoform X6"
                     /calculated_mol_wt=25909
     Region          89..162
                     /region_name="SEP"
                     /note="SEP domain; pfam08059"
                     /db_xref="CDD:462348"
     Region          <166..221
                     /region_name="Ubl1_cv_Nsp3_N-like"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; cl28922"
                     /db_xref="CDD:475130"
     CDS             1..229
                     /gene="UBXN2A"
                     /coded_by="XM_061154901.1:221..910"
                     /db_xref="GeneID:133064597"
ORIGIN      
        1 mqtrsaeirs isvwggaflv kqkrmkevdn lesikeewvc etgsdhqpls dsqqtnceyf
       61 vdslfeeaqk vgakclspte qkkqvdvsik lwkngftvnd dfrsysdgas qqflnsikkg
      121 elplelqgvf dkeevdvkve dkkneicmst kpvfqpfsgq ghrlgrishi kdfiekyqgs
      181 qrsppfslat alpflkllde tltleeadlq naviiqrlkk taepfkels
//
LOCUS       XP_061010885             676 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat and coiled-coil-containing protein isoform X1 [Dama
            dama].
ACCESSION   XP_061010885
VERSION     XP_061010885.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154902.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..676
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..676
                     /product="WD repeat and coiled-coil-containing protein
                     isoform X1"
                     /calculated_mol_wt=74456
     Region          2..661
                     /region_name="WDCP"
                     /note="WD repeat and coiled-coil-containing protein
                     family; pfam15390"
                     /db_xref="CDD:464697"
     CDS             1..676
                     /gene="WDCP"
                     /coded_by="XM_061154902.1:123..2153"
                     /db_xref="GeneID:133064598"
ORIGIN      
        1 melgqgkllr tglnalyqav hpihglawtd gtqvvltnlq lhggeaklgd stvlgqfehv
       61 ygvswappga tdiptllavq hrkyvivwql cpgpaetskw lisqpcetrq sypvlpqgcv
      121 whpesailav ltawdvsvfy nihrdssqvk vdvstqglih cacwtqdgqr lvvaagnslh
      181 syiwdnaqkt lhrcslcpmf dvdsyvrsig atvdsqvvia telpldkicg lnacgtfdip
      241 psgedtclha lpvtdpvsse tnsetpvsss fsepldlthi hfnrsksegs sltclrkkdy
      301 ltgsgldssh lvlltfekev tcnrkviipg ilvpdliafn lkaqavavas ntsnvifiys
      361 vipllmpniq qiqlesnerp kgicfltdkl llilvgrqks tdsaflpssk sdqymirliv
      421 revmlkedfa vtlsenqndn ssfstllnkt nikkliedls pdffhqsggl lftansssqs
      481 grpgrtlike mespassicd gstvletlda rpvnssvtlp rpsgipahts tteppnlere
      541 eemyqlskel eivsrnlsev qrclselsdf lhngkksspv yplsqdlpyv hitcqkshfl
      601 gpvvekrmml lcngklrlst vqqtfglslv emlhdfhwil lcadsegfvp ltftatqeii
      661 irdgrsddfr nsvser
//
LOCUS       XP_061010886             638 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat and coiled-coil-containing protein isoform X2 [Dama
            dama].
ACCESSION   XP_061010886
VERSION     XP_061010886.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154903.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..638
                     /product="WD repeat and coiled-coil-containing protein
                     isoform X2"
                     /calculated_mol_wt=70134
     Region          2..635
                     /region_name="WDCP"
                     /note="WD repeat and coiled-coil-containing protein
                     family; pfam15390"
                     /db_xref="CDD:464697"
     CDS             1..638
                     /gene="WDCP"
                     /coded_by="XM_061154903.1:123..2039"
                     /db_xref="GeneID:133064598"
ORIGIN      
        1 melgqgkllr tglnalyqav hpihglawtd gtqvvltnlq lhggeaklgd stvlgqfehv
       61 ygvswappga tdiptllavq hrkyvivwql cpgpaetskw lisqpcetrq sypvlpqgcv
      121 whpesailav ltawdvsvfy nihrdssqvk vdvstqglih cacwtqdgqr lvvaagnslh
      181 syiwdnaqkt lhrcslcpmf dvdsyvrsig atvdsqvvia telpldkicg lnacgtfdip
      241 psgedtclha lpvtdpvsse tnsetpvsss fsepldlthi hfnrsksegs sltclrkkdy
      301 ltgsgldssh lvlltfekev tcnrkviipg ilvpdliafn lkaqavavas ntsnvifiys
      361 vipllmpniq qiqlesnerp kgicfltdkl llilvgrqks tdsaflpssk sdqymirliv
      421 revmlkedfa vtlsenqndn ssfstllnkt nikkliedls pdffhqsggl lftansssqs
      481 grpgrtlike mespassicd gstvletlda rpvnssvtlp rpsgipahts tteppnlere
      541 eemyqlskel eivsrnlsev qrclselsdf lhngkksspv yplsqdlpyv hitcqkshfl
      601 gpvvekrmml lcngklrlst vqqtfglslv emlhdfqk
//
LOCUS       XP_061010887             179 aa            linear   MAM 02-DEC-2023
DEFINITION  mitochondrial fission regulator 1-like [Dama dama].
ACCESSION   XP_061010887
VERSION     XP_061010887.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154904.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..179
                     /product="mitochondrial fission regulator 1-like"
                     /calculated_mol_wt=19636
     Region          7..>146
                     /region_name="Mito_fiss_reg"
                     /note="Mitochondrial fission regulator; pfam05308"
                     /db_xref="CDD:461620"
     CDS             1..179
                     /gene="LOC133064599"
                     /coded_by="XM_061154904.1:292..831"
                     /db_xref="GeneID:133064599"
ORIGIN      
        1 meanvtipiw qnkphgaars vvrrigtnlp lkpcprasfe tlpnisdlcl rdvppvptla
       61 diawiaadee etyarvrsdt rplrhtwkps plivmqrnas vpnlrgseer llalkkpalp
      121 alsrttelqd elshlrtqia kivaadaaln vanqntklpa arlkrmtasl cprpaalqi
//
LOCUS       XP_061010888            1653 aa            linear   MAM 02-DEC-2023
DEFINITION  intersectin-2 isoform X1 [Dama dama].
ACCESSION   XP_061010888
VERSION     XP_061010888.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154905.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1653
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1653
                     /product="intersectin-2 isoform X1"
                     /calculated_mol_wt=188277
     Region          15..107
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     Region          <86..>196
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          238..317
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     Region          378..>705
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          720..776
                     /region_name="SH3_Intersectin2_1"
                     /note="First Src homology 3 domain (or SH3A) of
                     Intersectin-2; cd11988"
                     /db_xref="CDD:212921"
     Site            order(727,729,732,736,756..757,770,772..773)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212921"
     Region          858..909
                     /region_name="SH3_Intersectin2_2"
                     /note="Second Src homology 3 domain (or SH3B) of
                     Intersectin-2; cd11990"
                     /db_xref="CDD:212923"
     Site            order(863,865,868,872,889..890,903,905..906)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212923"
     Region          941..992
                     /region_name="SH3_Intersectin2_3"
                     /note="Third Src homology 3 domain (or SH3C) of
                     Intersectin-2; cd11992"
                     /db_xref="CDD:212925"
     Site            order(946,948,951,955,972..973,986,988..989)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212925"
     Region          1013..1071
                     /region_name="SH3_Intersectin2_4"
                     /note="Fourth Src homology 3 domain (or SH3D) of
                     Intersectin-2; cd11994"
                     /db_xref="CDD:212927"
     Site            order(1018,1020,1023,1027,1045..1046,1064,1066..1067)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212927"
     Region          1086..1139
                     /region_name="SH3_Intersectin2_5"
                     /note="Fifth Src homology 3 domain (or SH3E) of
                     Intersectin-2; cd11996"
                     /db_xref="CDD:212929"
     Site            order(1092,1094,1097,1101,1119..1120,1133,1135..1136)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212929"
     Region          1170..1349
                     /region_name="RhoGEF"
                     /note="RhoGEF domain; pfam00621"
                     /db_xref="CDD:459876"
     Region          1368..1511
                     /region_name="PH_13"
                     /note="Pleckstrin homology domain; pfam16652"
                     /db_xref="CDD:465218"
     Region          1511..1645
                     /region_name="C2_Intersectin"
                     /note="C2 domain present in Intersectin; cd08375"
                     /db_xref="CDD:176021"
     Site            order(1547,1594,1596,1602)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176021"
     CDS             1..1653
                     /gene="ITSN2"
                     /coded_by="XM_061154905.1:123..5084"
                     /db_xref="GeneID:133064600"
ORIGIN      
        1 mmaqfptamn ggpnmwaits eertkhdkqf dnlkpsggyi tgdqartffl qsglpapvla
       61 eiwalsdlnk dgkmdqqefs iamkliklkl qgqqlpvvlp pimkqppmfs plisarfgmg
      121 smpnlsipqs lppvapiatp lssatsgttl pplmmpaplv psvstsslpn gtasliqpls
      181 ipyssstlph tssyslmmgg fgganiqkaq slidlgssss tsstaslpgn spktgtsewa
      241 vpqpsrlkyr qkfnsldksm sgylsgfqar nallqsnlsq tqlatiwtla didgdgqlka
      301 eefilamhlt dmakagqplp lalppelvpp sfrggkqids ingtlpsyqk tqeeepqkkl
      361 pvtfedkrka nyergnmele krrqammeqq qreaerkaqk ekeewerkqr elqeqewkkq
      421 lelekrlekq relerqreee rrkeierrea akqelerqrr lewerirrqe llsrrnreqe
      481 eivrlnskkk slhlelealn gkhqqisgrl qdvrlrkqtq ktelevldkq cdleimeikq
      541 lqqelqeyqn kliylvpekq llneriknmq lsntpdlgis llhkksleke elcqrlkeql
      601 daleketask lsemdsfnne lkelresynt qqlaieqlyk ikrdklreie rkrseliqkk
      661 kledeatrka kqgkenlwke nlrkeeeekq krlqeeksqe kvqeverkae ekqsepagtl
      721 vnyralyrfe arnhdemsfn sgdiiqvdek tvgepgwlyg sfqgnfgwfp cnyvekvtss
      781 eksvspkkal lpptvsatst seslssnqpa svtdyqnvsf snlsvntswq kksaftrtvs
      841 pvsvspihgq gqvvenlkaq alcswtakke nhlnfskhdi itvleqqenw wfgevhggrg
      901 wfpksyvkii pgsevkreep ealyasvnkk ptsaactvge eyialyayss vepgdltfte
      961 geeilvtqkd gewwtgsigd rtgifpsnyv kpkdqegfgs asksgtsnkk peiaqvtsay
     1021 aasgseqlsl apgqlililk kntsgwwqge lqargkkrqk gwfpashvkl lgpsserttp
     1081 afhpvcqvia mydytanned elsfskgqli nvlnkddpdw wqgeisgvtg lfpsnyvkmt
     1141 tdadpsqqwc adlqtldtmq pverkrqgyi helieteery vddlqlvvev fqkrmtepgf
     1201 ltegemalif vnwkeliman tkllkalrvr kktggekmpv hmigdilaae lshmqayirf
     1261 cscqlngaal lqqktdehtd fkeflkklas dprckgmpls sfllkpmqri trypllirsi
     1321 lentpenhvd hsslklaler aeelcsqvne gvrekensdr lewiqthvqc dglaeqlvfn
     1381 sltnclgprk llhsgklykt ksnkelhgfl fndfllltym vkqfavslas eklfssksna
     1441 qfkmyktpif lnealvklpt dpssdepvfh ishidrvytl rtdninerta wvqkikaase
     1501 qyidtekkkr ekayqarsqk ssgigrlmvh vieatelkac kpngksnpyc eismgsqsyt
     1561 trtlqdtlnp kwnfncqffi kdlyqdvlcl tmfdrdqfsp ddflgrtevp vakirteqes
     1621 kgpttrrlll hevptgevwv rfdlqlfeqk tll
//
LOCUS       XP_061010889            1653 aa            linear   MAM 02-DEC-2023
DEFINITION  intersectin-2 isoform X1 [Dama dama].
ACCESSION   XP_061010889
VERSION     XP_061010889.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154906.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1653
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1653
                     /product="intersectin-2 isoform X1"
                     /calculated_mol_wt=188277
     Region          15..107
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     Region          <86..>196
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          238..317
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     Region          378..>705
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          720..776
                     /region_name="SH3_Intersectin2_1"
                     /note="First Src homology 3 domain (or SH3A) of
                     Intersectin-2; cd11988"
                     /db_xref="CDD:212921"
     Site            order(727,729,732,736,756..757,770,772..773)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212921"
     Region          858..909
                     /region_name="SH3_Intersectin2_2"
                     /note="Second Src homology 3 domain (or SH3B) of
                     Intersectin-2; cd11990"
                     /db_xref="CDD:212923"
     Site            order(863,865,868,872,889..890,903,905..906)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212923"
     Region          941..992
                     /region_name="SH3_Intersectin2_3"
                     /note="Third Src homology 3 domain (or SH3C) of
                     Intersectin-2; cd11992"
                     /db_xref="CDD:212925"
     Site            order(946,948,951,955,972..973,986,988..989)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212925"
     Region          1013..1071
                     /region_name="SH3_Intersectin2_4"
                     /note="Fourth Src homology 3 domain (or SH3D) of
                     Intersectin-2; cd11994"
                     /db_xref="CDD:212927"
     Site            order(1018,1020,1023,1027,1045..1046,1064,1066..1067)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212927"
     Region          1086..1139
                     /region_name="SH3_Intersectin2_5"
                     /note="Fifth Src homology 3 domain (or SH3E) of
                     Intersectin-2; cd11996"
                     /db_xref="CDD:212929"
     Site            order(1092,1094,1097,1101,1119..1120,1133,1135..1136)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212929"
     Region          1170..1349
                     /region_name="RhoGEF"
                     /note="RhoGEF domain; pfam00621"
                     /db_xref="CDD:459876"
     Region          1368..1511
                     /region_name="PH_13"
                     /note="Pleckstrin homology domain; pfam16652"
                     /db_xref="CDD:465218"
     Region          1511..1645
                     /region_name="C2_Intersectin"
                     /note="C2 domain present in Intersectin; cd08375"
                     /db_xref="CDD:176021"
     Site            order(1547,1594,1596,1602)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176021"
     CDS             1..1653
                     /gene="ITSN2"
                     /coded_by="XM_061154906.1:113..5074"
                     /db_xref="GeneID:133064600"
ORIGIN      
        1 mmaqfptamn ggpnmwaits eertkhdkqf dnlkpsggyi tgdqartffl qsglpapvla
       61 eiwalsdlnk dgkmdqqefs iamkliklkl qgqqlpvvlp pimkqppmfs plisarfgmg
      121 smpnlsipqs lppvapiatp lssatsgttl pplmmpaplv psvstsslpn gtasliqpls
      181 ipyssstlph tssyslmmgg fgganiqkaq slidlgssss tsstaslpgn spktgtsewa
      241 vpqpsrlkyr qkfnsldksm sgylsgfqar nallqsnlsq tqlatiwtla didgdgqlka
      301 eefilamhlt dmakagqplp lalppelvpp sfrggkqids ingtlpsyqk tqeeepqkkl
      361 pvtfedkrka nyergnmele krrqammeqq qreaerkaqk ekeewerkqr elqeqewkkq
      421 lelekrlekq relerqreee rrkeierrea akqelerqrr lewerirrqe llsrrnreqe
      481 eivrlnskkk slhlelealn gkhqqisgrl qdvrlrkqtq ktelevldkq cdleimeikq
      541 lqqelqeyqn kliylvpekq llneriknmq lsntpdlgis llhkksleke elcqrlkeql
      601 daleketask lsemdsfnne lkelresynt qqlaieqlyk ikrdklreie rkrseliqkk
      661 kledeatrka kqgkenlwke nlrkeeeekq krlqeeksqe kvqeverkae ekqsepagtl
      721 vnyralyrfe arnhdemsfn sgdiiqvdek tvgepgwlyg sfqgnfgwfp cnyvekvtss
      781 eksvspkkal lpptvsatst seslssnqpa svtdyqnvsf snlsvntswq kksaftrtvs
      841 pvsvspihgq gqvvenlkaq alcswtakke nhlnfskhdi itvleqqenw wfgevhggrg
      901 wfpksyvkii pgsevkreep ealyasvnkk ptsaactvge eyialyayss vepgdltfte
      961 geeilvtqkd gewwtgsigd rtgifpsnyv kpkdqegfgs asksgtsnkk peiaqvtsay
     1021 aasgseqlsl apgqlililk kntsgwwqge lqargkkrqk gwfpashvkl lgpsserttp
     1081 afhpvcqvia mydytanned elsfskgqli nvlnkddpdw wqgeisgvtg lfpsnyvkmt
     1141 tdadpsqqwc adlqtldtmq pverkrqgyi helieteery vddlqlvvev fqkrmtepgf
     1201 ltegemalif vnwkeliman tkllkalrvr kktggekmpv hmigdilaae lshmqayirf
     1261 cscqlngaal lqqktdehtd fkeflkklas dprckgmpls sfllkpmqri trypllirsi
     1321 lentpenhvd hsslklaler aeelcsqvne gvrekensdr lewiqthvqc dglaeqlvfn
     1381 sltnclgprk llhsgklykt ksnkelhgfl fndfllltym vkqfavslas eklfssksna
     1441 qfkmyktpif lnealvklpt dpssdepvfh ishidrvytl rtdninerta wvqkikaase
     1501 qyidtekkkr ekayqarsqk ssgigrlmvh vieatelkac kpngksnpyc eismgsqsyt
     1561 trtlqdtlnp kwnfncqffi kdlyqdvlcl tmfdrdqfsp ddflgrtevp vakirteqes
     1621 kgpttrrlll hevptgevwv rfdlqlfeqk tll
//
LOCUS       XP_061010890            1148 aa            linear   MAM 02-DEC-2023
DEFINITION  intersectin-2 isoform X2 [Dama dama].
ACCESSION   XP_061010890
VERSION     XP_061010890.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154907.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1148
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1148
                     /product="intersectin-2 isoform X2"
                     /calculated_mol_wt=129877
     Region          15..107
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     Region          <86..>196
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          238..317
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     Region          378..>705
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          720..776
                     /region_name="SH3_Intersectin2_1"
                     /note="First Src homology 3 domain (or SH3A) of
                     Intersectin-2; cd11988"
                     /db_xref="CDD:212921"
     Site            order(727,729,732,736,756..757,770,772..773)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212921"
     Region          858..909
                     /region_name="SH3_Intersectin2_2"
                     /note="Second Src homology 3 domain (or SH3B) of
                     Intersectin-2; cd11990"
                     /db_xref="CDD:212923"
     Site            order(863,865,868,872,889..890,903,905..906)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212923"
     Region          941..992
                     /region_name="SH3_Intersectin2_3"
                     /note="Third Src homology 3 domain (or SH3C) of
                     Intersectin-2; cd11992"
                     /db_xref="CDD:212925"
     Site            order(946,948,951,955,972..973,986,988..989)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212925"
     Region          1013..1071
                     /region_name="SH3_Intersectin2_4"
                     /note="Fourth Src homology 3 domain (or SH3D) of
                     Intersectin-2; cd11994"
                     /db_xref="CDD:212927"
     Site            order(1018,1020,1023,1027,1045..1046,1064,1066..1067)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212927"
     Region          1086..1139
                     /region_name="SH3_Intersectin2_5"
                     /note="Fifth Src homology 3 domain (or SH3E) of
                     Intersectin-2; cd11996"
                     /db_xref="CDD:212929"
     Site            order(1092,1094,1097,1101,1119..1120,1133,1135..1136)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212929"
     CDS             1..1148
                     /gene="ITSN2"
                     /coded_by="XM_061154907.1:34..3480"
                     /db_xref="GeneID:133064600"
ORIGIN      
        1 mmaqfptamn ggpnmwaits eertkhdkqf dnlkpsggyi tgdqartffl qsglpapvla
       61 eiwalsdlnk dgkmdqqefs iamkliklkl qgqqlpvvlp pimkqppmfs plisarfgmg
      121 smpnlsipqs lppvapiatp lssatsgttl pplmmpaplv psvstsslpn gtasliqpls
      181 ipyssstlph tssyslmmgg fgganiqkaq slidlgssss tsstaslpgn spktgtsewa
      241 vpqpsrlkyr qkfnsldksm sgylsgfqar nallqsnlsq tqlatiwtla didgdgqlka
      301 eefilamhlt dmakagqplp lalppelvpp sfrggkqids ingtlpsyqk tqeeepqkkl
      361 pvtfedkrka nyergnmele krrqammeqq qreaerkaqk ekeewerkqr elqeqewkkq
      421 lelekrlekq relerqreee rrkeierrea akqelerqrr lewerirrqe llsrrnreqe
      481 eivrlnskkk slhlelealn gkhqqisgrl qdvrlrkqtq ktelevldkq cdleimeikq
      541 lqqelqeyqn kliylvpekq llneriknmq lsntpdlgis llhkksleke elcqrlkeql
      601 daleketask lsemdsfnne lkelresynt qqlaieqlyk ikrdklreie rkrseliqkk
      661 kledeatrka kqgkenlwke nlrkeeeekq krlqeeksqe kvqeverkae ekqsepagtl
      721 vnyralyrfe arnhdemsfn sgdiiqvdek tvgepgwlyg sfqgnfgwfp cnyvekvtss
      781 eksvspkkal lpptvsatst seslssnqpa svtdyqnvsf snlsvntswq kksaftrtvs
      841 pvsvspihgq gqvvenlkaq alcswtakke nhlnfskhdi itvleqqenw wfgevhggrg
      901 wfpksyvkii pgsevkreep ealyasvnkk ptsaactvge eyialyayss vepgdltfte
      961 geeilvtqkd gewwtgsigd rtgifpsnyv kpkdqegfgs asksgtsnkk peiaqvtsay
     1021 aasgseqlsl apgqlililk kntsgwwqge lqargkkrqk gwfpashvkl lgpsserttp
     1081 afhpvcqvia mydytanned elsfskgqli nvlnkddpdw wqgeisgvtg lfpsnyvkmt
     1141 tdadpsqq
//
LOCUS       XP_061010891             415 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM228A-like [Dama dama].
ACCESSION   XP_061010891
VERSION     XP_061010891.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154908.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..415
                     /product="protein FAM228A-like"
                     /calculated_mol_wt=49214
     CDS             1..415
                     /gene="LOC133064602"
                     /coded_by="XM_061154908.1:164..1411"
                     /db_xref="GeneID:133064602"
ORIGIN      
        1 mksyendlit dklpklkssr ewlepqplsf mevlakedvd aaiqsilyre nyiikeldky
       61 lkhhdflnar rkeilykrwv dhvadplqkk iiekvtsykk ikkrrqdeld gflkyvnkkg
      121 nafiehydpk eydpfymnke dpnflkrlda yfqhldafke rrkellhkkw tenvakplqq
      181 rimekvisyk alektkqenf eyflkhtnkm eiifgdfydp evynpfymtk kdpnygkvvv
      241 ppfcdplfrr qqktdeeqra ifqyttgkrc tlkefkelek arqyaslpqf tfslhsmvsk
      301 erpkesakpv gskthskcsp eklvcaeekf ppykvkmtsd vnptvferrf ysskisqesk
      361 rhekglalgt gqhrprswaa gegqqrcrsq pvdrrvmtae vlgqhlaalq lgdrp
//
LOCUS       XP_061010892             332 aa            linear   MAM 02-DEC-2023
DEFINITION  quinone oxidoreductase PIG3 isoform X1 [Dama dama].
ACCESSION   XP_061010892
VERSION     XP_061010892.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154909.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..332
                     /product="quinone oxidoreductase PIG3 isoform X1"
                     /calculated_mol_wt=35121
     Region          1..328
                     /region_name="p53_inducible_oxidoreductase"
                     /note="PIG3 p53-inducible quinone oxidoreductase; cd05276"
                     /db_xref="CDD:176180"
     Site            order(40..41,123,127,130,148,151..153,172..173,177,192,
                     216..217,238..239,241,264..266,317,322)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:176180"
     CDS             1..332
                     /gene="TP53I3"
                     /coded_by="XM_061154909.1:655..1653"
                     /db_xref="GeneID:133064603"
ORIGIN      
        1 miavhfdkpg gpenlylkev aktspgegev llkvaasaln radllqrqgq yapppgasni
       61 lgleasghva elgagcqgpw kvgdpamvll sgggqaqyvt vpaellmpip agltmcqaaa
      121 ipeawltafq llhlvgnvqa gdsvlihaga sgvgtaaiql armvgatplv tassqqklqi
      181 aeklgaaagf nykeedfsea tlkftkgagv nlildciggs yweknvncla ldgrwvlygl
      241 lggadvngpl fskllfkrgs litsllrsrd kkykqmlvka fteqilphfs tegpqrllpv
      301 ldrvypvaev qeaheymetn knvgkivlel pq
//
LOCUS       XP_061010894             332 aa            linear   MAM 02-DEC-2023
DEFINITION  quinone oxidoreductase PIG3 isoform X1 [Dama dama].
ACCESSION   XP_061010894
VERSION     XP_061010894.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154911.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..332
                     /product="quinone oxidoreductase PIG3 isoform X1"
                     /calculated_mol_wt=35121
     Region          1..328
                     /region_name="p53_inducible_oxidoreductase"
                     /note="PIG3 p53-inducible quinone oxidoreductase; cd05276"
                     /db_xref="CDD:176180"
     Site            order(40..41,123,127,130,148,151..153,172..173,177,192,
                     216..217,238..239,241,264..266,317,322)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:176180"
     CDS             1..332
                     /gene="TP53I3"
                     /coded_by="XM_061154911.1:919..1917"
                     /db_xref="GeneID:133064603"
ORIGIN      
        1 miavhfdkpg gpenlylkev aktspgegev llkvaasaln radllqrqgq yapppgasni
       61 lgleasghva elgagcqgpw kvgdpamvll sgggqaqyvt vpaellmpip agltmcqaaa
      121 ipeawltafq llhlvgnvqa gdsvlihaga sgvgtaaiql armvgatplv tassqqklqi
      181 aeklgaaagf nykeedfsea tlkftkgagv nlildciggs yweknvncla ldgrwvlygl
      241 lggadvngpl fskllfkrgs litsllrsrd kkykqmlvka fteqilphfs tegpqrllpv
      301 ldrvypvaev qeaheymetn knvgkivlel pq
//
LOCUS       XP_061010895             309 aa            linear   MAM 02-DEC-2023
DEFINITION  quinone oxidoreductase PIG3 isoform X2 [Dama dama].
ACCESSION   XP_061010895
VERSION     XP_061010895.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154912.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..309
                     /product="quinone oxidoreductase PIG3 isoform X2"
                     /calculated_mol_wt=32885
     Region          24..305
                     /region_name="p53_inducible_oxidoreductase"
                     /note="PIG3 p53-inducible quinone oxidoreductase; cd05276"
                     /db_xref="CDD:176180"
     Site            order(100,104,107,125,128..130,149..150,154,169,193..194,
                     215..216,218,241..243,294,299)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:176180"
     CDS             1..309
                     /gene="TP53I3"
                     /coded_by="XM_061154912.1:94..1023"
                     /db_xref="GeneID:133064603"
ORIGIN      
        1 mtcflpvlkl epfslpcftq rkgrqgqyap ppgasnilgl easghvaelg agcqgpwkvg
       61 dpamvllsgg gqaqyvtvpa ellmpipagl tmcqaaaipe awltafqllh lvgnvqagds
      121 vlihagasgv gtaaiqlarm vgatplvtas sqqklqiaek lgaaagfnyk eedfseatlk
      181 ftkgagvnli ldciggsywe knvnclaldg rwvlygllgg advngplfsk llfkrgslit
      241 sllrsrdkky kqmlvkafte qilphfsteg pqrllpvldr vypvaevqea heymetnknv
      301 gkivlelpq
//
LOCUS       XP_061010896             242 aa            linear   MAM 02-DEC-2023
DEFINITION  quinone oxidoreductase PIG3 isoform X3 [Dama dama].
ACCESSION   XP_061010896
VERSION     XP_061010896.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154913.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..242
                     /product="quinone oxidoreductase PIG3 isoform X3"
                     /calculated_mol_wt=24532
     Region          1..>205
                     /region_name="MDR"
                     /note="Medium chain reductase/dehydrogenase
                     (MDR)/zinc-dependent alcohol dehydrogenase-like family;
                     cl16912"
                     /db_xref="CDD:450120"
     CDS             1..242
                     /gene="TP53I3"
                     /coded_by="XM_061154913.1:407..1135"
                     /db_xref="GeneID:133064603"
ORIGIN      
        1 miavhfdkpg gpenlylkev aktspgegev llkvaasaln radllqrqgq yapppgasni
       61 lgleasghva elgagcqgpw kvgdpamvll sgggqaqyvt vpaellmpip agltmcqaaa
      121 ipeawltafq llhlvgnvqa gdsvlihaga sgvgtaaiql armvgatplv tassqqklqi
      181 aeklgaaagf nykeedfsea tlkftkvqan agegfhrans apllhggpst ltagsgqslp
      241 rg
//
LOCUS       XP_061010897             129 aa            linear   MAM 02-DEC-2023
DEFINITION  profilin-4 isoform X1 [Dama dama].
ACCESSION   XP_061010897
VERSION     XP_061010897.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154914.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..129
                     /product="profilin-4 isoform X1"
                     /calculated_mol_wt=14301
     Region          14..125
                     /region_name="Profilin"
                     /note="pfam00235"
                     /db_xref="CDD:459724"
     CDS             1..129
                     /gene="PFN4"
                     /coded_by="XM_061154914.1:151..540"
                     /db_xref="GeneID:133064604"
ORIGIN      
        1 mshlqnllld tllgtkhvds aaliklqers lcvaspgfsv mpsdvrtlvn gfaknplktr
       61 reglyfkekd ykcvraddys lyaknentgv ivvkthlyll vatysegmcp svcveatekl
      121 gdylrrkgn
//
LOCUS       XP_061010898             127 aa            linear   MAM 02-DEC-2023
DEFINITION  profilin-4 isoform X2 [Dama dama].
ACCESSION   XP_061010898
VERSION     XP_061010898.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154915.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..127
                     /product="profilin-4 isoform X2"
                     /calculated_mol_wt=13962
     Region          14..121
                     /region_name="Profilin"
                     /note="pfam00235"
                     /db_xref="CDD:459724"
     CDS             1..127
                     /gene="PFN4"
                     /coded_by="XM_061154915.1:151..534"
                     /db_xref="GeneID:133064604"
ORIGIN      
        1 mshlqnllld tllgtkhvds aaliklqers lcvaspgfsv mpsdvrtlvn gfaknplktr
       61 reglyfkekd ykcvraddys lyaknentgv ivvkthlyll vatysegmcp svcveatekl
      121 aflslcs
//
LOCUS       XP_061010899             125 aa            linear   MAM 02-DEC-2023
DEFINITION  splicing factor 3B subunit 6 [Dama dama].
ACCESSION   XP_061010899
VERSION     XP_061010899.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154916.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..125
                     /product="splicing factor 3B subunit 6"
                     /calculated_mol_wt=14454
     Region          17..93
                     /region_name="RRM_SF3B14"
                     /note="RNA recognition motif (RRM) found in pre-mRNA
                     branch site protein p14 (SF3B14) and similar proteins;
                     cd12241"
                     /db_xref="CDD:409687"
     Site            order(17,19..20,22,32,46..53,56,59,61,65..67,92)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:409687"
     Site            order(22,61,91..93)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:409687"
     CDS             1..125
                     /gene="SF3B6"
                     /coded_by="XM_061154916.1:256..633"
                     /db_xref="GeneID:133064605"
ORIGIN      
        1 mamqaakran irlppevnri lyirnlpyki taeemydifg kygpirqirv gntpetrgta
       61 yvvyedifda knacdhlsgf nvcnrylvvl yynanrafqk mdtkkkeeql kllkekygin
      121 tdppk
//
LOCUS       XP_061010900            1441 aa            linear   MAM 02-DEC-2023
DEFINITION  nuclear receptor coactivator 1 isoform X1 [Dama dama].
ACCESSION   XP_061010900
VERSION     XP_061010900.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154917.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1441
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1441
                     /product="nuclear receptor coactivator 1 isoform X1"
                     /calculated_mol_wt=157000
     Region          27..87
                     /region_name="bHLH-PAS_NCoA1_SRC1"
                     /note="basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS)
                     domain found in nuclear receptor coactivator 1 (NCoA-1)
                     and similar proteins; cd18948"
                     /db_xref="CDD:381518"
     Site            order(27..29,33,35..36,40,65..66)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381518"
     Site            order(38..39,42..43,45..46,67,70,74,76..77,81,83)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381518"
     Region          120..213
                     /region_name="PAS"
                     /note="PAS domain; PAS motifs appear in archaea,
                     eubacteria and eukarya. Probably the most surprising
                     identification of a PAS domain was that in EAG-like
                     K+-channels. PAS domains have been found to bind ligands,
                     and to act as sensors for light and oxygen in...; cd00130"
                     /db_xref="CDD:238075"
     Site            order(136,140,146,159..162,192)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238075"
     Site            order(156,160,168,172..173,199,201)
                     /site_type="other"
                     /note="heme pocket [chemical binding]"
                     /db_xref="CDD:238075"
     Region          259..370
                     /region_name="PAS_11"
                     /note="PAS domain; pfam14598"
                     /db_xref="CDD:464214"
     Region          468..590
                     /region_name="NCOA_u2"
                     /note="Unstructured region on nuclear receptor coactivator
                     protein; pfam16665"
                     /db_xref="CDD:465223"
     Region          629..708
                     /region_name="SRC-1"
                     /note="Steroid receptor coactivator; pfam08832"
                     /db_xref="CDD:462615"
     Region          741..818
                     /region_name="DUF4927"
                     /note="Domain of unknown function (DUF4927); pfam16279"
                     /db_xref="CDD:465083"
     Region          924..969
                     /region_name="Nuc_rec_co-act"
                     /note="Nuclear receptor coactivator; pfam08815"
                     /db_xref="CDD:462608"
     Region          974..>1287
                     /region_name="Med15"
                     /note="ARC105 or Med15 subunit of Mediator complex
                     non-fungal; pfam09606"
                     /db_xref="CDD:312941"
     Region          1149..1205
                     /region_name="DUF1518"
                     /note="Nuclear receptor coactivator, DUF1518; pfam07469"
                     /db_xref="CDD:462174"
     Region          1212..1268
                     /region_name="DUF1518"
                     /note="Nuclear receptor coactivator, DUF1518; pfam07469"
                     /db_xref="CDD:462174"
     CDS             1..1441
                     /gene="NCOA1"
                     /coded_by="XM_061154917.1:729..5054"
                     /db_xref="GeneID:133064607"
ORIGIN      
        1 msglgdsssd panpdthkrk gspcdtlass tekrrreqen kyleelaell sanisdidsl
       61 svkpdkckil kktvdqiqlm krmeqekstt ddevqksdis sssqgvieke slgpllleal
      121 dgfffvvnce grivfvsenv tsylgynqee lmntsvysil hvgdhaefvk nllpkslvng
      181 vpwpqeatrr nshtfncrml ihrpdepgpe nqeacqryev mqcftvsqpk siqedgedfq
      241 scliciarrl prppaitgve sfmtkqdttg kiisidtssl raagrtgwed lvrkciyaff
      301 qpqgrepsya rqlfqevmtr gtasspsyrf ilndgtmlsa htkcklcypq spdmqpfimg
      361 ihiidrehsg lspqddtnpg msvsrvnpsv npsispahgv arsstlppsn snmvptrvnr
      421 qqssdlhsss hsnssnsqgs fgcspgnqiv asvalnqgqa ssqstnppln lsnspmegtg
      481 islaqfmspr rqvssglatr prmpnnsfpp niptlsspvs mtntacnnsn rsysnipvtp
      541 lqsmnegpnn svgfsasspv lrqmssqnsp srlniqpaka epkdnkeias ilnemiqsdn
      601 ssndskplds gllhnndrls dgdnkysqts hklvqllttt aeqqlrhadi dtsckevlsc
      661 tgtstsastn sssgscpssh sslterhkil hrllqegsps dittlsvepd kkdsastsvs
      721 vtgqvqgnss vkleldtskk keskdhqllr ylldkdekdl rstpnlsldd vkvkvekkeq
      781 mdpcntnpaa mtkpapeeik lesqsqftad ldqfdqllpt lekapqlpgl cetermdgav
      841 tnvaikseil psalqsttar ptsrlnrlpe leleaidnqf gqpgtgdqip wanntvtavn
      901 qnkpedqcis sqldellcpp ttvegrndek alleqlvsfl sgkdetelae ldralgidkl
      961 vqgggldvls erfppqqatp plmmeerpnl ysqpysspsp tanlsspfqg mvrqkpslgt
     1021 mpvqvtpprg afspgmgmqp rqtlnrppaa pnqlrlqlqq rlqgqqqlih qnrqailnqf
     1081 aanapvginm rsgmqqqitp qpplnaqmla qrqrelysqq hrqrqliqqq ramlmrqqsf
     1141 gnnlppssgl pvqmgnprlp qgapqqfpyp pnygtnpgtp pastspfsql aanpeaplan
     1201 rssmvnrgmt gnmggqfgtg inpqmqqnvf qypgsgmvpq geasfapsls pgssmvpmpi
     1261 pppqssllqq tpptsgyqsp dmkawqqgam gnnnvfsqai qnqptpaqpg vynnmsitvs
     1321 maggntnvqn mnpmmgqmqm sslqmpgmnt vcpeqindpa lrhtglycnq lsstdllkte
     1381 adgtqqvqqv qvfadvqctv nlvggdpyln qpgplgtqkp tagpqtpqaq qksllqqllt
     1441 e
//
LOCUS       XP_061010901            1441 aa            linear   MAM 02-DEC-2023
DEFINITION  nuclear receptor coactivator 1 isoform X1 [Dama dama].
ACCESSION   XP_061010901
VERSION     XP_061010901.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154918.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1441
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1441
                     /product="nuclear receptor coactivator 1 isoform X1"
                     /calculated_mol_wt=157000
     Region          27..87
                     /region_name="bHLH-PAS_NCoA1_SRC1"
                     /note="basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS)
                     domain found in nuclear receptor coactivator 1 (NCoA-1)
                     and similar proteins; cd18948"
                     /db_xref="CDD:381518"
     Site            order(27..29,33,35..36,40,65..66)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381518"
     Site            order(38..39,42..43,45..46,67,70,74,76..77,81,83)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381518"
     Region          120..213
                     /region_name="PAS"
                     /note="PAS domain; PAS motifs appear in archaea,
                     eubacteria and eukarya. Probably the most surprising
                     identification of a PAS domain was that in EAG-like
                     K+-channels. PAS domains have been found to bind ligands,
                     and to act as sensors for light and oxygen in...; cd00130"
                     /db_xref="CDD:238075"
     Site            order(136,140,146,159..162,192)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238075"
     Site            order(156,160,168,172..173,199,201)
                     /site_type="other"
                     /note="heme pocket [chemical binding]"
                     /db_xref="CDD:238075"
     Region          259..370
                     /region_name="PAS_11"
                     /note="PAS domain; pfam14598"
                     /db_xref="CDD:464214"
     Region          468..590
                     /region_name="NCOA_u2"
                     /note="Unstructured region on nuclear receptor coactivator
                     protein; pfam16665"
                     /db_xref="CDD:465223"
     Region          629..708
                     /region_name="SRC-1"
                     /note="Steroid receptor coactivator; pfam08832"
                     /db_xref="CDD:462615"
     Region          741..818
                     /region_name="DUF4927"
                     /note="Domain of unknown function (DUF4927); pfam16279"
                     /db_xref="CDD:465083"
     Region          924..969
                     /region_name="Nuc_rec_co-act"
                     /note="Nuclear receptor coactivator; pfam08815"
                     /db_xref="CDD:462608"
     Region          974..>1287
                     /region_name="Med15"
                     /note="ARC105 or Med15 subunit of Mediator complex
                     non-fungal; pfam09606"
                     /db_xref="CDD:312941"
     Region          1149..1205
                     /region_name="DUF1518"
                     /note="Nuclear receptor coactivator, DUF1518; pfam07469"
                     /db_xref="CDD:462174"
     Region          1212..1268
                     /region_name="DUF1518"
                     /note="Nuclear receptor coactivator, DUF1518; pfam07469"
                     /db_xref="CDD:462174"
     CDS             1..1441
                     /gene="NCOA1"
                     /coded_by="XM_061154918.1:738..5063"
                     /db_xref="GeneID:133064607"
ORIGIN      
        1 msglgdsssd panpdthkrk gspcdtlass tekrrreqen kyleelaell sanisdidsl
       61 svkpdkckil kktvdqiqlm krmeqekstt ddevqksdis sssqgvieke slgpllleal
      121 dgfffvvnce grivfvsenv tsylgynqee lmntsvysil hvgdhaefvk nllpkslvng
      181 vpwpqeatrr nshtfncrml ihrpdepgpe nqeacqryev mqcftvsqpk siqedgedfq
      241 scliciarrl prppaitgve sfmtkqdttg kiisidtssl raagrtgwed lvrkciyaff
      301 qpqgrepsya rqlfqevmtr gtasspsyrf ilndgtmlsa htkcklcypq spdmqpfimg
      361 ihiidrehsg lspqddtnpg msvsrvnpsv npsispahgv arsstlppsn snmvptrvnr
      421 qqssdlhsss hsnssnsqgs fgcspgnqiv asvalnqgqa ssqstnppln lsnspmegtg
      481 islaqfmspr rqvssglatr prmpnnsfpp niptlsspvs mtntacnnsn rsysnipvtp
      541 lqsmnegpnn svgfsasspv lrqmssqnsp srlniqpaka epkdnkeias ilnemiqsdn
      601 ssndskplds gllhnndrls dgdnkysqts hklvqllttt aeqqlrhadi dtsckevlsc
      661 tgtstsastn sssgscpssh sslterhkil hrllqegsps dittlsvepd kkdsastsvs
      721 vtgqvqgnss vkleldtskk keskdhqllr ylldkdekdl rstpnlsldd vkvkvekkeq
      781 mdpcntnpaa mtkpapeeik lesqsqftad ldqfdqllpt lekapqlpgl cetermdgav
      841 tnvaikseil psalqsttar ptsrlnrlpe leleaidnqf gqpgtgdqip wanntvtavn
      901 qnkpedqcis sqldellcpp ttvegrndek alleqlvsfl sgkdetelae ldralgidkl
      961 vqgggldvls erfppqqatp plmmeerpnl ysqpysspsp tanlsspfqg mvrqkpslgt
     1021 mpvqvtpprg afspgmgmqp rqtlnrppaa pnqlrlqlqq rlqgqqqlih qnrqailnqf
     1081 aanapvginm rsgmqqqitp qpplnaqmla qrqrelysqq hrqrqliqqq ramlmrqqsf
     1141 gnnlppssgl pvqmgnprlp qgapqqfpyp pnygtnpgtp pastspfsql aanpeaplan
     1201 rssmvnrgmt gnmggqfgtg inpqmqqnvf qypgsgmvpq geasfapsls pgssmvpmpi
     1261 pppqssllqq tpptsgyqsp dmkawqqgam gnnnvfsqai qnqptpaqpg vynnmsitvs
     1321 maggntnvqn mnpmmgqmqm sslqmpgmnt vcpeqindpa lrhtglycnq lsstdllkte
     1381 adgtqqvqqv qvfadvqctv nlvggdpyln qpgplgtqkp tagpqtpqaq qksllqqllt
     1441 e
//
LOCUS       XP_061010902            1441 aa            linear   MAM 02-DEC-2023
DEFINITION  nuclear receptor coactivator 1 isoform X1 [Dama dama].
ACCESSION   XP_061010902
VERSION     XP_061010902.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154919.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1441
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1441
                     /product="nuclear receptor coactivator 1 isoform X1"
                     /calculated_mol_wt=157000
     Region          27..87
                     /region_name="bHLH-PAS_NCoA1_SRC1"
                     /note="basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS)
                     domain found in nuclear receptor coactivator 1 (NCoA-1)
                     and similar proteins; cd18948"
                     /db_xref="CDD:381518"
     Site            order(27..29,33,35..36,40,65..66)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381518"
     Site            order(38..39,42..43,45..46,67,70,74,76..77,81,83)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381518"
     Region          120..213
                     /region_name="PAS"
                     /note="PAS domain; PAS motifs appear in archaea,
                     eubacteria and eukarya. Probably the most surprising
                     identification of a PAS domain was that in EAG-like
                     K+-channels. PAS domains have been found to bind ligands,
                     and to act as sensors for light and oxygen in...; cd00130"
                     /db_xref="CDD:238075"
     Site            order(136,140,146,159..162,192)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238075"
     Site            order(156,160,168,172..173,199,201)
                     /site_type="other"
                     /note="heme pocket [chemical binding]"
                     /db_xref="CDD:238075"
     Region          259..370
                     /region_name="PAS_11"
                     /note="PAS domain; pfam14598"
                     /db_xref="CDD:464214"
     Region          468..590
                     /region_name="NCOA_u2"
                     /note="Unstructured region on nuclear receptor coactivator
                     protein; pfam16665"
                     /db_xref="CDD:465223"
     Region          629..708
                     /region_name="SRC-1"
                     /note="Steroid receptor coactivator; pfam08832"
                     /db_xref="CDD:462615"
     Region          741..818
                     /region_name="DUF4927"
                     /note="Domain of unknown function (DUF4927); pfam16279"
                     /db_xref="CDD:465083"
     Region          924..969
                     /region_name="Nuc_rec_co-act"
                     /note="Nuclear receptor coactivator; pfam08815"
                     /db_xref="CDD:462608"
     Region          974..>1287
                     /region_name="Med15"
                     /note="ARC105 or Med15 subunit of Mediator complex
                     non-fungal; pfam09606"
                     /db_xref="CDD:312941"
     Region          1149..1205
                     /region_name="DUF1518"
                     /note="Nuclear receptor coactivator, DUF1518; pfam07469"
                     /db_xref="CDD:462174"
     Region          1212..1268
                     /region_name="DUF1518"
                     /note="Nuclear receptor coactivator, DUF1518; pfam07469"
                     /db_xref="CDD:462174"
     CDS             1..1441
                     /gene="NCOA1"
                     /coded_by="XM_061154919.1:501..4826"
                     /db_xref="GeneID:133064607"
ORIGIN      
        1 msglgdsssd panpdthkrk gspcdtlass tekrrreqen kyleelaell sanisdidsl
       61 svkpdkckil kktvdqiqlm krmeqekstt ddevqksdis sssqgvieke slgpllleal
      121 dgfffvvnce grivfvsenv tsylgynqee lmntsvysil hvgdhaefvk nllpkslvng
      181 vpwpqeatrr nshtfncrml ihrpdepgpe nqeacqryev mqcftvsqpk siqedgedfq
      241 scliciarrl prppaitgve sfmtkqdttg kiisidtssl raagrtgwed lvrkciyaff
      301 qpqgrepsya rqlfqevmtr gtasspsyrf ilndgtmlsa htkcklcypq spdmqpfimg
      361 ihiidrehsg lspqddtnpg msvsrvnpsv npsispahgv arsstlppsn snmvptrvnr
      421 qqssdlhsss hsnssnsqgs fgcspgnqiv asvalnqgqa ssqstnppln lsnspmegtg
      481 islaqfmspr rqvssglatr prmpnnsfpp niptlsspvs mtntacnnsn rsysnipvtp
      541 lqsmnegpnn svgfsasspv lrqmssqnsp srlniqpaka epkdnkeias ilnemiqsdn
      601 ssndskplds gllhnndrls dgdnkysqts hklvqllttt aeqqlrhadi dtsckevlsc
      661 tgtstsastn sssgscpssh sslterhkil hrllqegsps dittlsvepd kkdsastsvs
      721 vtgqvqgnss vkleldtskk keskdhqllr ylldkdekdl rstpnlsldd vkvkvekkeq
      781 mdpcntnpaa mtkpapeeik lesqsqftad ldqfdqllpt lekapqlpgl cetermdgav
      841 tnvaikseil psalqsttar ptsrlnrlpe leleaidnqf gqpgtgdqip wanntvtavn
      901 qnkpedqcis sqldellcpp ttvegrndek alleqlvsfl sgkdetelae ldralgidkl
      961 vqgggldvls erfppqqatp plmmeerpnl ysqpysspsp tanlsspfqg mvrqkpslgt
     1021 mpvqvtpprg afspgmgmqp rqtlnrppaa pnqlrlqlqq rlqgqqqlih qnrqailnqf
     1081 aanapvginm rsgmqqqitp qpplnaqmla qrqrelysqq hrqrqliqqq ramlmrqqsf
     1141 gnnlppssgl pvqmgnprlp qgapqqfpyp pnygtnpgtp pastspfsql aanpeaplan
     1201 rssmvnrgmt gnmggqfgtg inpqmqqnvf qypgsgmvpq geasfapsls pgssmvpmpi
     1261 pppqssllqq tpptsgyqsp dmkawqqgam gnnnvfsqai qnqptpaqpg vynnmsitvs
     1321 maggntnvqn mnpmmgqmqm sslqmpgmnt vcpeqindpa lrhtglycnq lsstdllkte
     1381 adgtqqvqqv qvfadvqctv nlvggdpyln qpgplgtqkp tagpqtpqaq qksllqqllt
     1441 e
//
LOCUS       XP_061010903            1441 aa            linear   MAM 02-DEC-2023
DEFINITION  nuclear receptor coactivator 1 isoform X1 [Dama dama].
ACCESSION   XP_061010903
VERSION     XP_061010903.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154920.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1441
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1441
                     /product="nuclear receptor coactivator 1 isoform X1"
                     /calculated_mol_wt=157000
     Region          27..87
                     /region_name="bHLH-PAS_NCoA1_SRC1"
                     /note="basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS)
                     domain found in nuclear receptor coactivator 1 (NCoA-1)
                     and similar proteins; cd18948"
                     /db_xref="CDD:381518"
     Site            order(27..29,33,35..36,40,65..66)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381518"
     Site            order(38..39,42..43,45..46,67,70,74,76..77,81,83)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381518"
     Region          120..213
                     /region_name="PAS"
                     /note="PAS domain; PAS motifs appear in archaea,
                     eubacteria and eukarya. Probably the most surprising
                     identification of a PAS domain was that in EAG-like
                     K+-channels. PAS domains have been found to bind ligands,
                     and to act as sensors for light and oxygen in...; cd00130"
                     /db_xref="CDD:238075"
     Site            order(136,140,146,159..162,192)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238075"
     Site            order(156,160,168,172..173,199,201)
                     /site_type="other"
                     /note="heme pocket [chemical binding]"
                     /db_xref="CDD:238075"
     Region          259..370
                     /region_name="PAS_11"
                     /note="PAS domain; pfam14598"
                     /db_xref="CDD:464214"
     Region          468..590
                     /region_name="NCOA_u2"
                     /note="Unstructured region on nuclear receptor coactivator
                     protein; pfam16665"
                     /db_xref="CDD:465223"
     Region          629..708
                     /region_name="SRC-1"
                     /note="Steroid receptor coactivator; pfam08832"
                     /db_xref="CDD:462615"
     Region          741..818
                     /region_name="DUF4927"
                     /note="Domain of unknown function (DUF4927); pfam16279"
                     /db_xref="CDD:465083"
     Region          924..969
                     /region_name="Nuc_rec_co-act"
                     /note="Nuclear receptor coactivator; pfam08815"
                     /db_xref="CDD:462608"
     Region          974..>1287
                     /region_name="Med15"
                     /note="ARC105 or Med15 subunit of Mediator complex
                     non-fungal; pfam09606"
                     /db_xref="CDD:312941"
     Region          1149..1205
                     /region_name="DUF1518"
                     /note="Nuclear receptor coactivator, DUF1518; pfam07469"
                     /db_xref="CDD:462174"
     Region          1212..1268
                     /region_name="DUF1518"
                     /note="Nuclear receptor coactivator, DUF1518; pfam07469"
                     /db_xref="CDD:462174"
     CDS             1..1441
                     /gene="NCOA1"
                     /coded_by="XM_061154920.1:822..5147"
                     /db_xref="GeneID:133064607"
ORIGIN      
        1 msglgdsssd panpdthkrk gspcdtlass tekrrreqen kyleelaell sanisdidsl
       61 svkpdkckil kktvdqiqlm krmeqekstt ddevqksdis sssqgvieke slgpllleal
      121 dgfffvvnce grivfvsenv tsylgynqee lmntsvysil hvgdhaefvk nllpkslvng
      181 vpwpqeatrr nshtfncrml ihrpdepgpe nqeacqryev mqcftvsqpk siqedgedfq
      241 scliciarrl prppaitgve sfmtkqdttg kiisidtssl raagrtgwed lvrkciyaff
      301 qpqgrepsya rqlfqevmtr gtasspsyrf ilndgtmlsa htkcklcypq spdmqpfimg
      361 ihiidrehsg lspqddtnpg msvsrvnpsv npsispahgv arsstlppsn snmvptrvnr
      421 qqssdlhsss hsnssnsqgs fgcspgnqiv asvalnqgqa ssqstnppln lsnspmegtg
      481 islaqfmspr rqvssglatr prmpnnsfpp niptlsspvs mtntacnnsn rsysnipvtp
      541 lqsmnegpnn svgfsasspv lrqmssqnsp srlniqpaka epkdnkeias ilnemiqsdn
      601 ssndskplds gllhnndrls dgdnkysqts hklvqllttt aeqqlrhadi dtsckevlsc
      661 tgtstsastn sssgscpssh sslterhkil hrllqegsps dittlsvepd kkdsastsvs
      721 vtgqvqgnss vkleldtskk keskdhqllr ylldkdekdl rstpnlsldd vkvkvekkeq
      781 mdpcntnpaa mtkpapeeik lesqsqftad ldqfdqllpt lekapqlpgl cetermdgav
      841 tnvaikseil psalqsttar ptsrlnrlpe leleaidnqf gqpgtgdqip wanntvtavn
      901 qnkpedqcis sqldellcpp ttvegrndek alleqlvsfl sgkdetelae ldralgidkl
      961 vqgggldvls erfppqqatp plmmeerpnl ysqpysspsp tanlsspfqg mvrqkpslgt
     1021 mpvqvtpprg afspgmgmqp rqtlnrppaa pnqlrlqlqq rlqgqqqlih qnrqailnqf
     1081 aanapvginm rsgmqqqitp qpplnaqmla qrqrelysqq hrqrqliqqq ramlmrqqsf
     1141 gnnlppssgl pvqmgnprlp qgapqqfpyp pnygtnpgtp pastspfsql aanpeaplan
     1201 rssmvnrgmt gnmggqfgtg inpqmqqnvf qypgsgmvpq geasfapsls pgssmvpmpi
     1261 pppqssllqq tpptsgyqsp dmkawqqgam gnnnvfsqai qnqptpaqpg vynnmsitvs
     1321 maggntnvqn mnpmmgqmqm sslqmpgmnt vcpeqindpa lrhtglycnq lsstdllkte
     1381 adgtqqvqqv qvfadvqctv nlvggdpyln qpgplgtqkp tagpqtpqaq qksllqqllt
     1441 e
//
LOCUS       XP_061010904            1441 aa            linear   MAM 02-DEC-2023
DEFINITION  nuclear receptor coactivator 1 isoform X1 [Dama dama].
ACCESSION   XP_061010904
VERSION     XP_061010904.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154921.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1441
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1441
                     /product="nuclear receptor coactivator 1 isoform X1"
                     /calculated_mol_wt=157000
     Region          27..87
                     /region_name="bHLH-PAS_NCoA1_SRC1"
                     /note="basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS)
                     domain found in nuclear receptor coactivator 1 (NCoA-1)
                     and similar proteins; cd18948"
                     /db_xref="CDD:381518"
     Site            order(27..29,33,35..36,40,65..66)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381518"
     Site            order(38..39,42..43,45..46,67,70,74,76..77,81,83)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381518"
     Region          120..213
                     /region_name="PAS"
                     /note="PAS domain; PAS motifs appear in archaea,
                     eubacteria and eukarya. Probably the most surprising
                     identification of a PAS domain was that in EAG-like
                     K+-channels. PAS domains have been found to bind ligands,
                     and to act as sensors for light and oxygen in...; cd00130"
                     /db_xref="CDD:238075"
     Site            order(136,140,146,159..162,192)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238075"
     Site            order(156,160,168,172..173,199,201)
                     /site_type="other"
                     /note="heme pocket [chemical binding]"
                     /db_xref="CDD:238075"
     Region          259..370
                     /region_name="PAS_11"
                     /note="PAS domain; pfam14598"
                     /db_xref="CDD:464214"
     Region          468..590
                     /region_name="NCOA_u2"
                     /note="Unstructured region on nuclear receptor coactivator
                     protein; pfam16665"
                     /db_xref="CDD:465223"
     Region          629..708
                     /region_name="SRC-1"
                     /note="Steroid receptor coactivator; pfam08832"
                     /db_xref="CDD:462615"
     Region          741..818
                     /region_name="DUF4927"
                     /note="Domain of unknown function (DUF4927); pfam16279"
                     /db_xref="CDD:465083"
     Region          924..969
                     /region_name="Nuc_rec_co-act"
                     /note="Nuclear receptor coactivator; pfam08815"
                     /db_xref="CDD:462608"
     Region          974..>1287
                     /region_name="Med15"
                     /note="ARC105 or Med15 subunit of Mediator complex
                     non-fungal; pfam09606"
                     /db_xref="CDD:312941"
     Region          1149..1205
                     /region_name="DUF1518"
                     /note="Nuclear receptor coactivator, DUF1518; pfam07469"
                     /db_xref="CDD:462174"
     Region          1212..1268
                     /region_name="DUF1518"
                     /note="Nuclear receptor coactivator, DUF1518; pfam07469"
                     /db_xref="CDD:462174"
     CDS             1..1441
                     /gene="NCOA1"
                     /coded_by="XM_061154921.1:683..5008"
                     /db_xref="GeneID:133064607"
ORIGIN      
        1 msglgdsssd panpdthkrk gspcdtlass tekrrreqen kyleelaell sanisdidsl
       61 svkpdkckil kktvdqiqlm krmeqekstt ddevqksdis sssqgvieke slgpllleal
      121 dgfffvvnce grivfvsenv tsylgynqee lmntsvysil hvgdhaefvk nllpkslvng
      181 vpwpqeatrr nshtfncrml ihrpdepgpe nqeacqryev mqcftvsqpk siqedgedfq
      241 scliciarrl prppaitgve sfmtkqdttg kiisidtssl raagrtgwed lvrkciyaff
      301 qpqgrepsya rqlfqevmtr gtasspsyrf ilndgtmlsa htkcklcypq spdmqpfimg
      361 ihiidrehsg lspqddtnpg msvsrvnpsv npsispahgv arsstlppsn snmvptrvnr
      421 qqssdlhsss hsnssnsqgs fgcspgnqiv asvalnqgqa ssqstnppln lsnspmegtg
      481 islaqfmspr rqvssglatr prmpnnsfpp niptlsspvs mtntacnnsn rsysnipvtp
      541 lqsmnegpnn svgfsasspv lrqmssqnsp srlniqpaka epkdnkeias ilnemiqsdn
      601 ssndskplds gllhnndrls dgdnkysqts hklvqllttt aeqqlrhadi dtsckevlsc
      661 tgtstsastn sssgscpssh sslterhkil hrllqegsps dittlsvepd kkdsastsvs
      721 vtgqvqgnss vkleldtskk keskdhqllr ylldkdekdl rstpnlsldd vkvkvekkeq
      781 mdpcntnpaa mtkpapeeik lesqsqftad ldqfdqllpt lekapqlpgl cetermdgav
      841 tnvaikseil psalqsttar ptsrlnrlpe leleaidnqf gqpgtgdqip wanntvtavn
      901 qnkpedqcis sqldellcpp ttvegrndek alleqlvsfl sgkdetelae ldralgidkl
      961 vqgggldvls erfppqqatp plmmeerpnl ysqpysspsp tanlsspfqg mvrqkpslgt
     1021 mpvqvtpprg afspgmgmqp rqtlnrppaa pnqlrlqlqq rlqgqqqlih qnrqailnqf
     1081 aanapvginm rsgmqqqitp qpplnaqmla qrqrelysqq hrqrqliqqq ramlmrqqsf
     1141 gnnlppssgl pvqmgnprlp qgapqqfpyp pnygtnpgtp pastspfsql aanpeaplan
     1201 rssmvnrgmt gnmggqfgtg inpqmqqnvf qypgsgmvpq geasfapsls pgssmvpmpi
     1261 pppqssllqq tpptsgyqsp dmkawqqgam gnnnvfsqai qnqptpaqpg vynnmsitvs
     1321 maggntnvqn mnpmmgqmqm sslqmpgmnt vcpeqindpa lrhtglycnq lsstdllkte
     1381 adgtqqvqqv qvfadvqctv nlvggdpyln qpgplgtqkp tagpqtpqaq qksllqqllt
     1441 e
//
LOCUS       XP_061010905            1441 aa            linear   MAM 02-DEC-2023
DEFINITION  nuclear receptor coactivator 1 isoform X1 [Dama dama].
ACCESSION   XP_061010905
VERSION     XP_061010905.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154922.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1441
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1441
                     /product="nuclear receptor coactivator 1 isoform X1"
                     /calculated_mol_wt=157000
     Region          27..87
                     /region_name="bHLH-PAS_NCoA1_SRC1"
                     /note="basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS)
                     domain found in nuclear receptor coactivator 1 (NCoA-1)
                     and similar proteins; cd18948"
                     /db_xref="CDD:381518"
     Site            order(27..29,33,35..36,40,65..66)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381518"
     Site            order(38..39,42..43,45..46,67,70,74,76..77,81,83)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381518"
     Region          120..213
                     /region_name="PAS"
                     /note="PAS domain; PAS motifs appear in archaea,
                     eubacteria and eukarya. Probably the most surprising
                     identification of a PAS domain was that in EAG-like
                     K+-channels. PAS domains have been found to bind ligands,
                     and to act as sensors for light and oxygen in...; cd00130"
                     /db_xref="CDD:238075"
     Site            order(136,140,146,159..162,192)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238075"
     Site            order(156,160,168,172..173,199,201)
                     /site_type="other"
                     /note="heme pocket [chemical binding]"
                     /db_xref="CDD:238075"
     Region          259..370
                     /region_name="PAS_11"
                     /note="PAS domain; pfam14598"
                     /db_xref="CDD:464214"
     Region          468..590
                     /region_name="NCOA_u2"
                     /note="Unstructured region on nuclear receptor coactivator
                     protein; pfam16665"
                     /db_xref="CDD:465223"
     Region          629..708
                     /region_name="SRC-1"
                     /note="Steroid receptor coactivator; pfam08832"
                     /db_xref="CDD:462615"
     Region          741..818
                     /region_name="DUF4927"
                     /note="Domain of unknown function (DUF4927); pfam16279"
                     /db_xref="CDD:465083"
     Region          924..969
                     /region_name="Nuc_rec_co-act"
                     /note="Nuclear receptor coactivator; pfam08815"
                     /db_xref="CDD:462608"
     Region          974..>1287
                     /region_name="Med15"
                     /note="ARC105 or Med15 subunit of Mediator complex
                     non-fungal; pfam09606"
                     /db_xref="CDD:312941"
     Region          1149..1205
                     /region_name="DUF1518"
                     /note="Nuclear receptor coactivator, DUF1518; pfam07469"
                     /db_xref="CDD:462174"
     Region          1212..1268
                     /region_name="DUF1518"
                     /note="Nuclear receptor coactivator, DUF1518; pfam07469"
                     /db_xref="CDD:462174"
     CDS             1..1441
                     /gene="NCOA1"
                     /coded_by="XM_061154922.1:674..4999"
                     /db_xref="GeneID:133064607"
ORIGIN      
        1 msglgdsssd panpdthkrk gspcdtlass tekrrreqen kyleelaell sanisdidsl
       61 svkpdkckil kktvdqiqlm krmeqekstt ddevqksdis sssqgvieke slgpllleal
      121 dgfffvvnce grivfvsenv tsylgynqee lmntsvysil hvgdhaefvk nllpkslvng
      181 vpwpqeatrr nshtfncrml ihrpdepgpe nqeacqryev mqcftvsqpk siqedgedfq
      241 scliciarrl prppaitgve sfmtkqdttg kiisidtssl raagrtgwed lvrkciyaff
      301 qpqgrepsya rqlfqevmtr gtasspsyrf ilndgtmlsa htkcklcypq spdmqpfimg
      361 ihiidrehsg lspqddtnpg msvsrvnpsv npsispahgv arsstlppsn snmvptrvnr
      421 qqssdlhsss hsnssnsqgs fgcspgnqiv asvalnqgqa ssqstnppln lsnspmegtg
      481 islaqfmspr rqvssglatr prmpnnsfpp niptlsspvs mtntacnnsn rsysnipvtp
      541 lqsmnegpnn svgfsasspv lrqmssqnsp srlniqpaka epkdnkeias ilnemiqsdn
      601 ssndskplds gllhnndrls dgdnkysqts hklvqllttt aeqqlrhadi dtsckevlsc
      661 tgtstsastn sssgscpssh sslterhkil hrllqegsps dittlsvepd kkdsastsvs
      721 vtgqvqgnss vkleldtskk keskdhqllr ylldkdekdl rstpnlsldd vkvkvekkeq
      781 mdpcntnpaa mtkpapeeik lesqsqftad ldqfdqllpt lekapqlpgl cetermdgav
      841 tnvaikseil psalqsttar ptsrlnrlpe leleaidnqf gqpgtgdqip wanntvtavn
      901 qnkpedqcis sqldellcpp ttvegrndek alleqlvsfl sgkdetelae ldralgidkl
      961 vqgggldvls erfppqqatp plmmeerpnl ysqpysspsp tanlsspfqg mvrqkpslgt
     1021 mpvqvtpprg afspgmgmqp rqtlnrppaa pnqlrlqlqq rlqgqqqlih qnrqailnqf
     1081 aanapvginm rsgmqqqitp qpplnaqmla qrqrelysqq hrqrqliqqq ramlmrqqsf
     1141 gnnlppssgl pvqmgnprlp qgapqqfpyp pnygtnpgtp pastspfsql aanpeaplan
     1201 rssmvnrgmt gnmggqfgtg inpqmqqnvf qypgsgmvpq geasfapsls pgssmvpmpi
     1261 pppqssllqq tpptsgyqsp dmkawqqgam gnnnvfsqai qnqptpaqpg vynnmsitvs
     1321 maggntnvqn mnpmmgqmqm sslqmpgmnt vcpeqindpa lrhtglycnq lsstdllkte
     1381 adgtqqvqqv qvfadvqctv nlvggdpyln qpgplgtqkp tagpqtpqaq qksllqqllt
     1441 e
//
LOCUS       XP_061010907            1441 aa            linear   MAM 02-DEC-2023
DEFINITION  nuclear receptor coactivator 1 isoform X1 [Dama dama].
ACCESSION   XP_061010907
VERSION     XP_061010907.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154924.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1441
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1441
                     /product="nuclear receptor coactivator 1 isoform X1"
                     /calculated_mol_wt=157000
     Region          27..87
                     /region_name="bHLH-PAS_NCoA1_SRC1"
                     /note="basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS)
                     domain found in nuclear receptor coactivator 1 (NCoA-1)
                     and similar proteins; cd18948"
                     /db_xref="CDD:381518"
     Site            order(27..29,33,35..36,40,65..66)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381518"
     Site            order(38..39,42..43,45..46,67,70,74,76..77,81,83)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381518"
     Region          120..213
                     /region_name="PAS"
                     /note="PAS domain; PAS motifs appear in archaea,
                     eubacteria and eukarya. Probably the most surprising
                     identification of a PAS domain was that in EAG-like
                     K+-channels. PAS domains have been found to bind ligands,
                     and to act as sensors for light and oxygen in...; cd00130"
                     /db_xref="CDD:238075"
     Site            order(136,140,146,159..162,192)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238075"
     Site            order(156,160,168,172..173,199,201)
                     /site_type="other"
                     /note="heme pocket [chemical binding]"
                     /db_xref="CDD:238075"
     Region          259..370
                     /region_name="PAS_11"
                     /note="PAS domain; pfam14598"
                     /db_xref="CDD:464214"
     Region          468..590
                     /region_name="NCOA_u2"
                     /note="Unstructured region on nuclear receptor coactivator
                     protein; pfam16665"
                     /db_xref="CDD:465223"
     Region          629..708
                     /region_name="SRC-1"
                     /note="Steroid receptor coactivator; pfam08832"
                     /db_xref="CDD:462615"
     Region          741..818
                     /region_name="DUF4927"
                     /note="Domain of unknown function (DUF4927); pfam16279"
                     /db_xref="CDD:465083"
     Region          924..969
                     /region_name="Nuc_rec_co-act"
                     /note="Nuclear receptor coactivator; pfam08815"
                     /db_xref="CDD:462608"
     Region          974..>1287
                     /region_name="Med15"
                     /note="ARC105 or Med15 subunit of Mediator complex
                     non-fungal; pfam09606"
                     /db_xref="CDD:312941"
     Region          1149..1205
                     /region_name="DUF1518"
                     /note="Nuclear receptor coactivator, DUF1518; pfam07469"
                     /db_xref="CDD:462174"
     Region          1212..1268
                     /region_name="DUF1518"
                     /note="Nuclear receptor coactivator, DUF1518; pfam07469"
                     /db_xref="CDD:462174"
     CDS             1..1441
                     /gene="NCOA1"
                     /coded_by="XM_061154924.1:264..4589"
                     /db_xref="GeneID:133064607"
ORIGIN      
        1 msglgdsssd panpdthkrk gspcdtlass tekrrreqen kyleelaell sanisdidsl
       61 svkpdkckil kktvdqiqlm krmeqekstt ddevqksdis sssqgvieke slgpllleal
      121 dgfffvvnce grivfvsenv tsylgynqee lmntsvysil hvgdhaefvk nllpkslvng
      181 vpwpqeatrr nshtfncrml ihrpdepgpe nqeacqryev mqcftvsqpk siqedgedfq
      241 scliciarrl prppaitgve sfmtkqdttg kiisidtssl raagrtgwed lvrkciyaff
      301 qpqgrepsya rqlfqevmtr gtasspsyrf ilndgtmlsa htkcklcypq spdmqpfimg
      361 ihiidrehsg lspqddtnpg msvsrvnpsv npsispahgv arsstlppsn snmvptrvnr
      421 qqssdlhsss hsnssnsqgs fgcspgnqiv asvalnqgqa ssqstnppln lsnspmegtg
      481 islaqfmspr rqvssglatr prmpnnsfpp niptlsspvs mtntacnnsn rsysnipvtp
      541 lqsmnegpnn svgfsasspv lrqmssqnsp srlniqpaka epkdnkeias ilnemiqsdn
      601 ssndskplds gllhnndrls dgdnkysqts hklvqllttt aeqqlrhadi dtsckevlsc
      661 tgtstsastn sssgscpssh sslterhkil hrllqegsps dittlsvepd kkdsastsvs
      721 vtgqvqgnss vkleldtskk keskdhqllr ylldkdekdl rstpnlsldd vkvkvekkeq
      781 mdpcntnpaa mtkpapeeik lesqsqftad ldqfdqllpt lekapqlpgl cetermdgav
      841 tnvaikseil psalqsttar ptsrlnrlpe leleaidnqf gqpgtgdqip wanntvtavn
      901 qnkpedqcis sqldellcpp ttvegrndek alleqlvsfl sgkdetelae ldralgidkl
      961 vqgggldvls erfppqqatp plmmeerpnl ysqpysspsp tanlsspfqg mvrqkpslgt
     1021 mpvqvtpprg afspgmgmqp rqtlnrppaa pnqlrlqlqq rlqgqqqlih qnrqailnqf
     1081 aanapvginm rsgmqqqitp qpplnaqmla qrqrelysqq hrqrqliqqq ramlmrqqsf
     1141 gnnlppssgl pvqmgnprlp qgapqqfpyp pnygtnpgtp pastspfsql aanpeaplan
     1201 rssmvnrgmt gnmggqfgtg inpqmqqnvf qypgsgmvpq geasfapsls pgssmvpmpi
     1261 pppqssllqq tpptsgyqsp dmkawqqgam gnnnvfsqai qnqptpaqpg vynnmsitvs
     1321 maggntnvqn mnpmmgqmqm sslqmpgmnt vcpeqindpa lrhtglycnq lsstdllkte
     1381 adgtqqvqqv qvfadvqctv nlvggdpyln qpgplgtqkp tagpqtpqaq qksllqqllt
     1441 e
//
LOCUS       XP_061010908            1441 aa            linear   MAM 02-DEC-2023
DEFINITION  nuclear receptor coactivator 1 isoform X1 [Dama dama].
ACCESSION   XP_061010908
VERSION     XP_061010908.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154925.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1441
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1441
                     /product="nuclear receptor coactivator 1 isoform X1"
                     /calculated_mol_wt=157000
     Region          27..87
                     /region_name="bHLH-PAS_NCoA1_SRC1"
                     /note="basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS)
                     domain found in nuclear receptor coactivator 1 (NCoA-1)
                     and similar proteins; cd18948"
                     /db_xref="CDD:381518"
     Site            order(27..29,33,35..36,40,65..66)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381518"
     Site            order(38..39,42..43,45..46,67,70,74,76..77,81,83)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381518"
     Region          120..213
                     /region_name="PAS"
                     /note="PAS domain; PAS motifs appear in archaea,
                     eubacteria and eukarya. Probably the most surprising
                     identification of a PAS domain was that in EAG-like
                     K+-channels. PAS domains have been found to bind ligands,
                     and to act as sensors for light and oxygen in...; cd00130"
                     /db_xref="CDD:238075"
     Site            order(136,140,146,159..162,192)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238075"
     Site            order(156,160,168,172..173,199,201)
                     /site_type="other"
                     /note="heme pocket [chemical binding]"
                     /db_xref="CDD:238075"
     Region          259..370
                     /region_name="PAS_11"
                     /note="PAS domain; pfam14598"
                     /db_xref="CDD:464214"
     Region          468..590
                     /region_name="NCOA_u2"
                     /note="Unstructured region on nuclear receptor coactivator
                     protein; pfam16665"
                     /db_xref="CDD:465223"
     Region          629..708
                     /region_name="SRC-1"
                     /note="Steroid receptor coactivator; pfam08832"
                     /db_xref="CDD:462615"
     Region          741..818
                     /region_name="DUF4927"
                     /note="Domain of unknown function (DUF4927); pfam16279"
                     /db_xref="CDD:465083"
     Region          924..969
                     /region_name="Nuc_rec_co-act"
                     /note="Nuclear receptor coactivator; pfam08815"
                     /db_xref="CDD:462608"
     Region          974..>1287
                     /region_name="Med15"
                     /note="ARC105 or Med15 subunit of Mediator complex
                     non-fungal; pfam09606"
                     /db_xref="CDD:312941"
     Region          1149..1205
                     /region_name="DUF1518"
                     /note="Nuclear receptor coactivator, DUF1518; pfam07469"
                     /db_xref="CDD:462174"
     Region          1212..1268
                     /region_name="DUF1518"
                     /note="Nuclear receptor coactivator, DUF1518; pfam07469"
                     /db_xref="CDD:462174"
     CDS             1..1441
                     /gene="NCOA1"
                     /coded_by="XM_061154925.1:512..4837"
                     /db_xref="GeneID:133064607"
ORIGIN      
        1 msglgdsssd panpdthkrk gspcdtlass tekrrreqen kyleelaell sanisdidsl
       61 svkpdkckil kktvdqiqlm krmeqekstt ddevqksdis sssqgvieke slgpllleal
      121 dgfffvvnce grivfvsenv tsylgynqee lmntsvysil hvgdhaefvk nllpkslvng
      181 vpwpqeatrr nshtfncrml ihrpdepgpe nqeacqryev mqcftvsqpk siqedgedfq
      241 scliciarrl prppaitgve sfmtkqdttg kiisidtssl raagrtgwed lvrkciyaff
      301 qpqgrepsya rqlfqevmtr gtasspsyrf ilndgtmlsa htkcklcypq spdmqpfimg
      361 ihiidrehsg lspqddtnpg msvsrvnpsv npsispahgv arsstlppsn snmvptrvnr
      421 qqssdlhsss hsnssnsqgs fgcspgnqiv asvalnqgqa ssqstnppln lsnspmegtg
      481 islaqfmspr rqvssglatr prmpnnsfpp niptlsspvs mtntacnnsn rsysnipvtp
      541 lqsmnegpnn svgfsasspv lrqmssqnsp srlniqpaka epkdnkeias ilnemiqsdn
      601 ssndskplds gllhnndrls dgdnkysqts hklvqllttt aeqqlrhadi dtsckevlsc
      661 tgtstsastn sssgscpssh sslterhkil hrllqegsps dittlsvepd kkdsastsvs
      721 vtgqvqgnss vkleldtskk keskdhqllr ylldkdekdl rstpnlsldd vkvkvekkeq
      781 mdpcntnpaa mtkpapeeik lesqsqftad ldqfdqllpt lekapqlpgl cetermdgav
      841 tnvaikseil psalqsttar ptsrlnrlpe leleaidnqf gqpgtgdqip wanntvtavn
      901 qnkpedqcis sqldellcpp ttvegrndek alleqlvsfl sgkdetelae ldralgidkl
      961 vqgggldvls erfppqqatp plmmeerpnl ysqpysspsp tanlsspfqg mvrqkpslgt
     1021 mpvqvtpprg afspgmgmqp rqtlnrppaa pnqlrlqlqq rlqgqqqlih qnrqailnqf
     1081 aanapvginm rsgmqqqitp qpplnaqmla qrqrelysqq hrqrqliqqq ramlmrqqsf
     1141 gnnlppssgl pvqmgnprlp qgapqqfpyp pnygtnpgtp pastspfsql aanpeaplan
     1201 rssmvnrgmt gnmggqfgtg inpqmqqnvf qypgsgmvpq geasfapsls pgssmvpmpi
     1261 pppqssllqq tpptsgyqsp dmkawqqgam gnnnvfsqai qnqptpaqpg vynnmsitvs
     1321 maggntnvqn mnpmmgqmqm sslqmpgmnt vcpeqindpa lrhtglycnq lsstdllkte
     1381 adgtqqvqqv qvfadvqctv nlvggdpyln qpgplgtqkp tagpqtpqaq qksllqqllt
     1441 e
//
LOCUS       XP_061010909            1440 aa            linear   MAM 02-DEC-2023
DEFINITION  nuclear receptor coactivator 1 isoform X2 [Dama dama].
ACCESSION   XP_061010909
VERSION     XP_061010909.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154926.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1440
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1440
                     /product="nuclear receptor coactivator 1 isoform X2"
                     /calculated_mol_wt=156872
     Region          27..87
                     /region_name="bHLH-PAS_NCoA1_SRC1"
                     /note="basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS)
                     domain found in nuclear receptor coactivator 1 (NCoA-1)
                     and similar proteins; cd18948"
                     /db_xref="CDD:381518"
     Site            order(27..29,33,35..36,40,65..66)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381518"
     Site            order(38..39,42..43,45..46,67,70,74,76..77,81,83)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381518"
     Region          120..213
                     /region_name="PAS"
                     /note="PAS domain; PAS motifs appear in archaea,
                     eubacteria and eukarya. Probably the most surprising
                     identification of a PAS domain was that in EAG-like
                     K+-channels. PAS domains have been found to bind ligands,
                     and to act as sensors for light and oxygen in...; cd00130"
                     /db_xref="CDD:238075"
     Site            order(136,140,146,159..162,192)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238075"
     Site            order(156,160,168,172..173,199,201)
                     /site_type="other"
                     /note="heme pocket [chemical binding]"
                     /db_xref="CDD:238075"
     Region          259..370
                     /region_name="PAS_11"
                     /note="PAS domain; pfam14598"
                     /db_xref="CDD:464214"
     Region          468..590
                     /region_name="NCOA_u2"
                     /note="Unstructured region on nuclear receptor coactivator
                     protein; pfam16665"
                     /db_xref="CDD:465223"
     Region          629..708
                     /region_name="SRC-1"
                     /note="Steroid receptor coactivator; pfam08832"
                     /db_xref="CDD:462615"
     Region          741..818
                     /region_name="DUF4927"
                     /note="Domain of unknown function (DUF4927); pfam16279"
                     /db_xref="CDD:465083"
     Region          924..969
                     /region_name="Nuc_rec_co-act"
                     /note="Nuclear receptor coactivator; pfam08815"
                     /db_xref="CDD:462608"
     Region          974..>1287
                     /region_name="Med15"
                     /note="ARC105 or Med15 subunit of Mediator complex
                     non-fungal; pfam09606"
                     /db_xref="CDD:312941"
     Region          1149..1205
                     /region_name="DUF1518"
                     /note="Nuclear receptor coactivator, DUF1518; pfam07469"
                     /db_xref="CDD:462174"
     Region          1212..1268
                     /region_name="DUF1518"
                     /note="Nuclear receptor coactivator, DUF1518; pfam07469"
                     /db_xref="CDD:462174"
     CDS             1..1440
                     /gene="NCOA1"
                     /coded_by="XM_061154926.1:729..5051"
                     /db_xref="GeneID:133064607"
ORIGIN      
        1 msglgdsssd panpdthkrk gspcdtlass tekrrreqen kyleelaell sanisdidsl
       61 svkpdkckil kktvdqiqlm krmeqekstt ddevqksdis sssqgvieke slgpllleal
      121 dgfffvvnce grivfvsenv tsylgynqee lmntsvysil hvgdhaefvk nllpkslvng
      181 vpwpqeatrr nshtfncrml ihrpdepgpe nqeacqryev mqcftvsqpk siqedgedfq
      241 scliciarrl prppaitgve sfmtkqdttg kiisidtssl raagrtgwed lvrkciyaff
      301 qpqgrepsya rqlfqevmtr gtasspsyrf ilndgtmlsa htkcklcypq spdmqpfimg
      361 ihiidrehsg lspqddtnpg msvsrvnpsv npsispahgv arsstlppsn snmvptrvnr
      421 qqssdlhsss hsnssnsqgs fgcspgnqiv asvalnqgqa ssqstnppln lsnspmegtg
      481 islaqfmspr rqvssglatr prmpnnsfpp niptlsspvs mtntacnnsn rsysnipvtp
      541 lqsmnegpnn svgfsasspv lrqmssqnsp srlniqpaka epkdnkeias ilnemiqsdn
      601 ssndskplds gllhnndrls dgdnkysqts hklvqllttt aeqqlrhadi dtsckevlsc
      661 tgtstsastn sssgscpssh sslterhkil hrllqegsps dittlsvepd kkdsastsvs
      721 vtgqvqgnss vkleldtskk keskdhqllr ylldkdekdl rstpnlsldd vkvkvekkeq
      781 mdpcntnpaa mtkpapeeik lesqsqftad ldqfdqllpt lekapqlpgl cetermdgav
      841 tnvaikseil psalqsttar ptsrlnrlpe leleaidnqf gqpgtgdqip wanntvtavn
      901 qnkpedqcis sqldellcpp ttvegrndek alleqlvsfl sgkdetelae ldralgidkl
      961 vqgggldvls erfppqqatp plmmeerpnl ysqpysspsp tanlsspfqg mvrqkpslgt
     1021 mpvqvtpprg afspgmgmqp rqtlnrppaa pnqlrlqlqq rlqgqqqlih qnrqailnqf
     1081 aanapvginm rsgmqqqitp qpplnaqmla qrqrelysqq hrqrqliqqq ramlmrqqsf
     1141 gnnlppssgl pvqmgnprlp qgapqqfpyp pnygtnpgtp pastspfsql aanpeaplan
     1201 rssmvnrgmt gnmggqfgtg inpqmqqnvf qypgsgmvpq geasfapsls pgssmvpmpi
     1261 pppqssllqq tpptsgyqsp dmkawqqgam gnnnvfsqai qnqptpaqpg vynnmsitvs
     1321 maggntnvqn mnpmmgqmqm sslqmpgmnt vcpeqindpa lrhtglycnq lsstdllkte
     1381 adgtqvqqvq vfadvqctvn lvggdpylnq pgplgtqkpt agpqtpqaqq ksllqqllte
//
LOCUS       XP_061010910            1399 aa            linear   MAM 02-DEC-2023
DEFINITION  nuclear receptor coactivator 1 isoform X3 [Dama dama].
ACCESSION   XP_061010910
VERSION     XP_061010910.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154927.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1399
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1399
                     /product="nuclear receptor coactivator 1 isoform X3"
                     /calculated_mol_wt=152644
     Region          27..87
                     /region_name="bHLH-PAS_NCoA1_SRC1"
                     /note="basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS)
                     domain found in nuclear receptor coactivator 1 (NCoA-1)
                     and similar proteins; cd18948"
                     /db_xref="CDD:381518"
     Site            order(27..29,33,35..36,40,65..66)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381518"
     Site            order(38..39,42..43,45..46,67,70,74,76..77,81,83)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381518"
     Region          120..213
                     /region_name="PAS"
                     /note="PAS domain; PAS motifs appear in archaea,
                     eubacteria and eukarya. Probably the most surprising
                     identification of a PAS domain was that in EAG-like
                     K+-channels. PAS domains have been found to bind ligands,
                     and to act as sensors for light and oxygen in...; cd00130"
                     /db_xref="CDD:238075"
     Site            order(136,140,146,159..162,192)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238075"
     Site            order(156,160,168,172..173,199,201)
                     /site_type="other"
                     /note="heme pocket [chemical binding]"
                     /db_xref="CDD:238075"
     Region          259..370
                     /region_name="PAS_11"
                     /note="PAS domain; pfam14598"
                     /db_xref="CDD:464214"
     Region          468..590
                     /region_name="NCOA_u2"
                     /note="Unstructured region on nuclear receptor coactivator
                     protein; pfam16665"
                     /db_xref="CDD:465223"
     Region          629..708
                     /region_name="SRC-1"
                     /note="Steroid receptor coactivator; pfam08832"
                     /db_xref="CDD:462615"
     Region          741..818
                     /region_name="DUF4927"
                     /note="Domain of unknown function (DUF4927); pfam16279"
                     /db_xref="CDD:465083"
     Region          924..969
                     /region_name="Nuc_rec_co-act"
                     /note="Nuclear receptor coactivator; pfam08815"
                     /db_xref="CDD:462608"
     Region          974..>1287
                     /region_name="Med15"
                     /note="ARC105 or Med15 subunit of Mediator complex
                     non-fungal; pfam09606"
                     /db_xref="CDD:312941"
     Region          1149..1205
                     /region_name="DUF1518"
                     /note="Nuclear receptor coactivator, DUF1518; pfam07469"
                     /db_xref="CDD:462174"
     Region          1212..1268
                     /region_name="DUF1518"
                     /note="Nuclear receptor coactivator, DUF1518; pfam07469"
                     /db_xref="CDD:462174"
     CDS             1..1399
                     /gene="NCOA1"
                     /coded_by="XM_061154927.1:729..4928"
                     /db_xref="GeneID:133064607"
ORIGIN      
        1 msglgdsssd panpdthkrk gspcdtlass tekrrreqen kyleelaell sanisdidsl
       61 svkpdkckil kktvdqiqlm krmeqekstt ddevqksdis sssqgvieke slgpllleal
      121 dgfffvvnce grivfvsenv tsylgynqee lmntsvysil hvgdhaefvk nllpkslvng
      181 vpwpqeatrr nshtfncrml ihrpdepgpe nqeacqryev mqcftvsqpk siqedgedfq
      241 scliciarrl prppaitgve sfmtkqdttg kiisidtssl raagrtgwed lvrkciyaff
      301 qpqgrepsya rqlfqevmtr gtasspsyrf ilndgtmlsa htkcklcypq spdmqpfimg
      361 ihiidrehsg lspqddtnpg msvsrvnpsv npsispahgv arsstlppsn snmvptrvnr
      421 qqssdlhsss hsnssnsqgs fgcspgnqiv asvalnqgqa ssqstnppln lsnspmegtg
      481 islaqfmspr rqvssglatr prmpnnsfpp niptlsspvs mtntacnnsn rsysnipvtp
      541 lqsmnegpnn svgfsasspv lrqmssqnsp srlniqpaka epkdnkeias ilnemiqsdn
      601 ssndskplds gllhnndrls dgdnkysqts hklvqllttt aeqqlrhadi dtsckevlsc
      661 tgtstsastn sssgscpssh sslterhkil hrllqegsps dittlsvepd kkdsastsvs
      721 vtgqvqgnss vkleldtskk keskdhqllr ylldkdekdl rstpnlsldd vkvkvekkeq
      781 mdpcntnpaa mtkpapeeik lesqsqftad ldqfdqllpt lekapqlpgl cetermdgav
      841 tnvaikseil psalqsttar ptsrlnrlpe leleaidnqf gqpgtgdqip wanntvtavn
      901 qnkpedqcis sqldellcpp ttvegrndek alleqlvsfl sgkdetelae ldralgidkl
      961 vqgggldvls erfppqqatp plmmeerpnl ysqpysspsp tanlsspfqg mvrqkpslgt
     1021 mpvqvtpprg afspgmgmqp rqtlnrppaa pnqlrlqlqq rlqgqqqlih qnrqailnqf
     1081 aanapvginm rsgmqqqitp qpplnaqmla qrqrelysqq hrqrqliqqq ramlmrqqsf
     1141 gnnlppssgl pvqmgnprlp qgapqqfpyp pnygtnpgtp pastspfsql aanpeaplan
     1201 rssmvnrgmt gnmggqfgtg inpqmqqnvf qypgsgmvpq geasfapsls pgssmvpmpi
     1261 pppqssllqq tpptsgyqsp dmkawqqgam gnnnvfsqai qnqptpaqpg vynnmsitvs
     1321 maggntnvqn mnpmmgqmqm sslqmpgmnt vcpeqindpa lrhtglycnq lsstdllkte
     1381 adgtqdkkte effsvvttd
//
LOCUS       XP_061010911            1399 aa            linear   MAM 02-DEC-2023
DEFINITION  nuclear receptor coactivator 1 isoform X3 [Dama dama].
ACCESSION   XP_061010911
VERSION     XP_061010911.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154928.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1399
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1399
                     /product="nuclear receptor coactivator 1 isoform X3"
                     /calculated_mol_wt=152644
     Region          27..87
                     /region_name="bHLH-PAS_NCoA1_SRC1"
                     /note="basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS)
                     domain found in nuclear receptor coactivator 1 (NCoA-1)
                     and similar proteins; cd18948"
                     /db_xref="CDD:381518"
     Site            order(27..29,33,35..36,40,65..66)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381518"
     Site            order(38..39,42..43,45..46,67,70,74,76..77,81,83)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381518"
     Region          120..213
                     /region_name="PAS"
                     /note="PAS domain; PAS motifs appear in archaea,
                     eubacteria and eukarya. Probably the most surprising
                     identification of a PAS domain was that in EAG-like
                     K+-channels. PAS domains have been found to bind ligands,
                     and to act as sensors for light and oxygen in...; cd00130"
                     /db_xref="CDD:238075"
     Site            order(136,140,146,159..162,192)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238075"
     Site            order(156,160,168,172..173,199,201)
                     /site_type="other"
                     /note="heme pocket [chemical binding]"
                     /db_xref="CDD:238075"
     Region          259..370
                     /region_name="PAS_11"
                     /note="PAS domain; pfam14598"
                     /db_xref="CDD:464214"
     Region          468..590
                     /region_name="NCOA_u2"
                     /note="Unstructured region on nuclear receptor coactivator
                     protein; pfam16665"
                     /db_xref="CDD:465223"
     Region          629..708
                     /region_name="SRC-1"
                     /note="Steroid receptor coactivator; pfam08832"
                     /db_xref="CDD:462615"
     Region          741..818
                     /region_name="DUF4927"
                     /note="Domain of unknown function (DUF4927); pfam16279"
                     /db_xref="CDD:465083"
     Region          924..969
                     /region_name="Nuc_rec_co-act"
                     /note="Nuclear receptor coactivator; pfam08815"
                     /db_xref="CDD:462608"
     Region          974..>1287
                     /region_name="Med15"
                     /note="ARC105 or Med15 subunit of Mediator complex
                     non-fungal; pfam09606"
                     /db_xref="CDD:312941"
     Region          1149..1205
                     /region_name="DUF1518"
                     /note="Nuclear receptor coactivator, DUF1518; pfam07469"
                     /db_xref="CDD:462174"
     Region          1212..1268
                     /region_name="DUF1518"
                     /note="Nuclear receptor coactivator, DUF1518; pfam07469"
                     /db_xref="CDD:462174"
     CDS             1..1399
                     /gene="NCOA1"
                     /coded_by="XM_061154928.1:729..4928"
                     /db_xref="GeneID:133064607"
ORIGIN      
        1 msglgdsssd panpdthkrk gspcdtlass tekrrreqen kyleelaell sanisdidsl
       61 svkpdkckil kktvdqiqlm krmeqekstt ddevqksdis sssqgvieke slgpllleal
      121 dgfffvvnce grivfvsenv tsylgynqee lmntsvysil hvgdhaefvk nllpkslvng
      181 vpwpqeatrr nshtfncrml ihrpdepgpe nqeacqryev mqcftvsqpk siqedgedfq
      241 scliciarrl prppaitgve sfmtkqdttg kiisidtssl raagrtgwed lvrkciyaff
      301 qpqgrepsya rqlfqevmtr gtasspsyrf ilndgtmlsa htkcklcypq spdmqpfimg
      361 ihiidrehsg lspqddtnpg msvsrvnpsv npsispahgv arsstlppsn snmvptrvnr
      421 qqssdlhsss hsnssnsqgs fgcspgnqiv asvalnqgqa ssqstnppln lsnspmegtg
      481 islaqfmspr rqvssglatr prmpnnsfpp niptlsspvs mtntacnnsn rsysnipvtp
      541 lqsmnegpnn svgfsasspv lrqmssqnsp srlniqpaka epkdnkeias ilnemiqsdn
      601 ssndskplds gllhnndrls dgdnkysqts hklvqllttt aeqqlrhadi dtsckevlsc
      661 tgtstsastn sssgscpssh sslterhkil hrllqegsps dittlsvepd kkdsastsvs
      721 vtgqvqgnss vkleldtskk keskdhqllr ylldkdekdl rstpnlsldd vkvkvekkeq
      781 mdpcntnpaa mtkpapeeik lesqsqftad ldqfdqllpt lekapqlpgl cetermdgav
      841 tnvaikseil psalqsttar ptsrlnrlpe leleaidnqf gqpgtgdqip wanntvtavn
      901 qnkpedqcis sqldellcpp ttvegrndek alleqlvsfl sgkdetelae ldralgidkl
      961 vqgggldvls erfppqqatp plmmeerpnl ysqpysspsp tanlsspfqg mvrqkpslgt
     1021 mpvqvtpprg afspgmgmqp rqtlnrppaa pnqlrlqlqq rlqgqqqlih qnrqailnqf
     1081 aanapvginm rsgmqqqitp qpplnaqmla qrqrelysqq hrqrqliqqq ramlmrqqsf
     1141 gnnlppssgl pvqmgnprlp qgapqqfpyp pnygtnpgtp pastspfsql aanpeaplan
     1201 rssmvnrgmt gnmggqfgtg inpqmqqnvf qypgsgmvpq geasfapsls pgssmvpmpi
     1261 pppqssllqq tpptsgyqsp dmkawqqgam gnnnvfsqai qnqptpaqpg vynnmsitvs
     1321 maggntnvqn mnpmmgqmqm sslqmpgmnt vcpeqindpa lrhtglycnq lsstdllkte
     1381 adgtqdkkte effsvvttd
//
LOCUS       XP_061010912            1174 aa            linear   MAM 02-DEC-2023
DEFINITION  adenylate cyclase type 3 isoform X1 [Dama dama].
ACCESSION   XP_061010912
VERSION     XP_061010912.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154929.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1174
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1174
                     /product="adenylate cyclase type 3 isoform X1"
                     /calculated_mol_wt=131790
     Region          105..472
                     /region_name="AcyC"
                     /note="Adenylate cyclase, class 3 [Signal transduction
                     mechanisms]; COG2114"
                     /db_xref="CDD:441717"
     Region          310..494
                     /region_name="Guanylate_cyc"
                     /note="Adenylate and Guanylate cyclase catalytic domain;
                     pfam00211"
                     /db_xref="CDD:425528"
     Site            order(322,324..329,364,366..368,371,433..435,439..440,
                     443..444)
                     /site_type="active"
                     /note="nucleotidyl binding site [active]"
                     /db_xref="CDD:143636"
     Site            order(324,368)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143636"
     Site            order(329,341,344..345,348,352,364..365,421,424,434..437,
                     440)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143636"
     Region          944..1151
                     /region_name="Guanylate_cyc"
                     /note="Adenylate and Guanylate cyclase catalytic domain;
                     pfam00211"
                     /db_xref="CDD:425528"
     Site            order(956,958..962,967,1005,1007..1009,1012,1092..1094,
                     1098..1099,1102..1103,1139)
                     /site_type="active"
                     /note="nucleotidyl binding site [active]"
                     /db_xref="CDD:143636"
     Site            order(958,1009)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143636"
     Site            order(967,979,982..983,986,990,1005..1006,1080,1083,
                     1093..1096,1099,1139)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143636"
     CDS             1..1174
                     /gene="ADCY3"
                     /coded_by="XM_061154929.1:276..3800"
                     /db_xref="GeneID:133064609"
ORIGIN      
        1 mprtqgfsep eysaeysaey svslpsdpdr gvgrtheisv rnsgsclclp rfmrltfvpe
       61 slenlyqtyf krqrhetllv lvvfaalfdc yvvvmcavvf sgdklaplav agvglvldis
      121 lfvlckkgll pnrvtrrvvp yllwllisaq vfsylglnfs rahaasdtvg wqaffifsff
      181 itlplslspi viisvvscvv htlvlgvtva qqqqdglkgv qllreilanv flylcaivvg
      241 imsyymadrk hrkaflearq slevkmnlee qsqqqenlml silpkhvade mlkdmkkdes
      301 qkdqqqfntm ymyrhenvsi lfadivgftq lssacsaqel vkllnelfar fdklaakyhq
      361 lrikilgdcy ycicglpdyr edhavcsilm glamveaisy vrektktgvd mrvgvhtgtv
      421 lggvlgqkrw qydvwstdvt vankmeaggi pgrvhisqst mdclkgefdv epgeggsrcd
      481 yleekgiety liiaskpevk ktaaqnglng sallngalps skpsspalie tkesngsiht
      541 sgsiseelee qdaqadnpsf pnprrrlrlq dladrvvdas edehelnqll nealleresa
      601 qvvkkrntfl lsmrfmdpem etrysvekek qsgaafscsc vvllctaave ilidpwlmtn
      661 yvtfvvgeal llilticsla aifprafpkk lvafstwidr trwarntwam laifilvman
      721 vvdmlprpsl fltvsavplh pmlspsthgp glqlsclqyy tgptngtaem qvedgcvenp
      781 kyysyvavls liatimlvqv shmvkltlml liagavavin iyawcpifdd ydrkrfqqhd
      841 fpmvalekmq vfsssglngt drlplvpsky smtvmifvmm lsfyyfsrhv eklartlflw
      901 kievhdqker vyemrrwnea lvtnmlpehv arhflgskkr deelysqsyd eigvmfaslp
      961 nfadfytees innggieclr flneiisdfd slldnpkfrv itkiktigst ymaasgvtpd
     1021 vntngftssn keeksdkerw qhladladfa lamkdtltni nnqsfnnfml rigmnkggvl
     1081 agvigarkph ydiwgntvnv asrmestgvm gniqvveetq vilreygfrf vrrgpifvkg
     1141 kgelltfflk grdklatfpn gasitlphqv vdns
//
LOCUS       XP_061010913            1174 aa            linear   MAM 02-DEC-2023
DEFINITION  adenylate cyclase type 3 isoform X1 [Dama dama].
ACCESSION   XP_061010913
VERSION     XP_061010913.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154930.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1174
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1174
                     /product="adenylate cyclase type 3 isoform X1"
                     /calculated_mol_wt=131790
     Region          105..472
                     /region_name="AcyC"
                     /note="Adenylate cyclase, class 3 [Signal transduction
                     mechanisms]; COG2114"
                     /db_xref="CDD:441717"
     Region          310..494
                     /region_name="Guanylate_cyc"
                     /note="Adenylate and Guanylate cyclase catalytic domain;
                     pfam00211"
                     /db_xref="CDD:425528"
     Site            order(322,324..329,364,366..368,371,433..435,439..440,
                     443..444)
                     /site_type="active"
                     /note="nucleotidyl binding site [active]"
                     /db_xref="CDD:143636"
     Site            order(324,368)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143636"
     Site            order(329,341,344..345,348,352,364..365,421,424,434..437,
                     440)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143636"
     Region          944..1151
                     /region_name="Guanylate_cyc"
                     /note="Adenylate and Guanylate cyclase catalytic domain;
                     pfam00211"
                     /db_xref="CDD:425528"
     Site            order(956,958..962,967,1005,1007..1009,1012,1092..1094,
                     1098..1099,1102..1103,1139)
                     /site_type="active"
                     /note="nucleotidyl binding site [active]"
                     /db_xref="CDD:143636"
     Site            order(958,1009)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143636"
     Site            order(967,979,982..983,986,990,1005..1006,1080,1083,
                     1093..1096,1099,1139)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143636"
     CDS             1..1174
                     /gene="ADCY3"
                     /coded_by="XM_061154930.1:292..3816"
                     /db_xref="GeneID:133064609"
ORIGIN      
        1 mprtqgfsep eysaeysaey svslpsdpdr gvgrtheisv rnsgsclclp rfmrltfvpe
       61 slenlyqtyf krqrhetllv lvvfaalfdc yvvvmcavvf sgdklaplav agvglvldis
      121 lfvlckkgll pnrvtrrvvp yllwllisaq vfsylglnfs rahaasdtvg wqaffifsff
      181 itlplslspi viisvvscvv htlvlgvtva qqqqdglkgv qllreilanv flylcaivvg
      241 imsyymadrk hrkaflearq slevkmnlee qsqqqenlml silpkhvade mlkdmkkdes
      301 qkdqqqfntm ymyrhenvsi lfadivgftq lssacsaqel vkllnelfar fdklaakyhq
      361 lrikilgdcy ycicglpdyr edhavcsilm glamveaisy vrektktgvd mrvgvhtgtv
      421 lggvlgqkrw qydvwstdvt vankmeaggi pgrvhisqst mdclkgefdv epgeggsrcd
      481 yleekgiety liiaskpevk ktaaqnglng sallngalps skpsspalie tkesngsiht
      541 sgsiseelee qdaqadnpsf pnprrrlrlq dladrvvdas edehelnqll nealleresa
      601 qvvkkrntfl lsmrfmdpem etrysvekek qsgaafscsc vvllctaave ilidpwlmtn
      661 yvtfvvgeal llilticsla aifprafpkk lvafstwidr trwarntwam laifilvman
      721 vvdmlprpsl fltvsavplh pmlspsthgp glqlsclqyy tgptngtaem qvedgcvenp
      781 kyysyvavls liatimlvqv shmvkltlml liagavavin iyawcpifdd ydrkrfqqhd
      841 fpmvalekmq vfsssglngt drlplvpsky smtvmifvmm lsfyyfsrhv eklartlflw
      901 kievhdqker vyemrrwnea lvtnmlpehv arhflgskkr deelysqsyd eigvmfaslp
      961 nfadfytees innggieclr flneiisdfd slldnpkfrv itkiktigst ymaasgvtpd
     1021 vntngftssn keeksdkerw qhladladfa lamkdtltni nnqsfnnfml rigmnkggvl
     1081 agvigarkph ydiwgntvnv asrmestgvm gniqvveetq vilreygfrf vrrgpifvkg
     1141 kgelltfflk grdklatfpn gasitlphqv vdns
//
LOCUS       XP_061010914            1145 aa            linear   MAM 02-DEC-2023
DEFINITION  adenylate cyclase type 3 isoform X2 [Dama dama].
ACCESSION   XP_061010914
VERSION     XP_061010914.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154931.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1145
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1145
                     /product="adenylate cyclase type 3 isoform X2"
                     /calculated_mol_wt=128758
     Region          105..472
                     /region_name="AcyC"
                     /note="Adenylate cyclase, class 3 [Signal transduction
                     mechanisms]; COG2114"
                     /db_xref="CDD:441717"
     Region          310..494
                     /region_name="Guanylate_cyc"
                     /note="Adenylate and Guanylate cyclase catalytic domain;
                     pfam00211"
                     /db_xref="CDD:425528"
     Site            order(322,324..329,364,366..368,371,433..435,439..440,
                     443..444)
                     /site_type="active"
                     /note="nucleotidyl binding site [active]"
                     /db_xref="CDD:143636"
     Site            order(324,368)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143636"
     Site            order(329,341,344..345,348,352,364..365,421,424,434..437,
                     440)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143636"
     Region          915..1122
                     /region_name="Guanylate_cyc"
                     /note="Adenylate and Guanylate cyclase catalytic domain;
                     pfam00211"
                     /db_xref="CDD:425528"
     Site            order(927,929..933,938,976,978..980,983,1063..1065,
                     1069..1070,1073..1074,1110)
                     /site_type="active"
                     /note="nucleotidyl binding site [active]"
                     /db_xref="CDD:143636"
     Site            order(929,980)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143636"
     Site            order(938,950,953..954,957,961,976..977,1051,1054,
                     1064..1067,1070,1110)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143636"
     CDS             1..1145
                     /gene="ADCY3"
                     /coded_by="XM_061154931.1:366..3803"
                     /db_xref="GeneID:133064609"
ORIGIN      
        1 mprtqgfsep eysaeysaey svslpsdpdr gvgrtheisv rnsgsclclp rfmrltfvpe
       61 slenlyqtyf krqrhetllv lvvfaalfdc yvvvmcavvf sgdklaplav agvglvldis
      121 lfvlckkgll pnrvtrrvvp yllwllisaq vfsylglnfs rahaasdtvg wqaffifsff
      181 itlplslspi viisvvscvv htlvlgvtva qqqqdglkgv qllreilanv flylcaivvg
      241 imsyymadrk hrkaflearq slevkmnlee qsqqqenlml silpkhvade mlkdmkkdes
      301 qkdqqqfntm ymyrhenvsi lfadivgftq lssacsaqel vkllnelfar fdklaakyhq
      361 lrikilgdcy ycicglpdyr edhavcsilm glamveaisy vrektktgvd mrvgvhtgtv
      421 lggvlgqkrw qydvwstdvt vankmeaggi pgrvhisqst mdclkgefdv epgeggsrcd
      481 yleekgiety liiaskpevk ktaaqnglng sallngalps skpsspalie tkesngsiht
      541 sgsiseelee qdaqadnpsf pnprrrlrlq dladrvvdas edehelnqll nealleresa
      601 qvvkkrntfl lsmrfmdpem etrysvekek qsgaafscsc vvllctaave ilidpwlmtn
      661 yvtfvvgeal llilticsla aifprafpkk lvafstwidr trwarntwam laifilvman
      721 vvdmlsclqy ytgptngtae mqvedgcven pkyysyvavl sliatimlvq vshmvkltlm
      781 lliagavavi niyawcpifd dydrkrfqqh dfpmvalekm qvfsssglng tdrlplvpsk
      841 ysmtvmifvm mlsfyyfsrh veklartlfl wkievhdqke rvyemrrwne alvtnmlpeh
      901 varhflgskk rdeelysqsy deigvmfasl pnfadfytee sinnggiecl rflneiisdf
      961 dslldnpkfr vitkiktigs tymaasgvtp dvntngftss nkeeksdker wqhladladf
     1021 alamkdtltn innqsfnnfm lrigmnkggv lagvigarkp hydiwgntvn vasrmestgv
     1081 mgniqvveet qvilreygfr fvrrgpifvk gkgelltffl kgrdklatfp ngasitlphq
     1141 vvdns
//
LOCUS       XP_061010915            1124 aa            linear   MAM 02-DEC-2023
DEFINITION  adenylate cyclase type 3 isoform X3 [Dama dama].
ACCESSION   XP_061010915
VERSION     XP_061010915.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154932.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1124
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1124
                     /product="adenylate cyclase type 3 isoform X3"
                     /calculated_mol_wt=125930
     Region          <2..253
                     /region_name="AC_N"
                     /note="Adenylyl cyclase N-terminal extracellular and
                     transmembrane region; pfam16214"
                     /db_xref="CDD:318454"
     Region          260..444
                     /region_name="Guanylate_cyc"
                     /note="Adenylate and Guanylate cyclase catalytic domain;
                     pfam00211"
                     /db_xref="CDD:425528"
     Site            order(272,274..279,314,316..318,321,383..385,389..390,
                     393..394)
                     /site_type="active"
                     /note="nucleotidyl binding site [active]"
                     /db_xref="CDD:143636"
     Site            order(274,318)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143636"
     Site            order(279,291,294..295,298,302,314..315,371,374,384..387,
                     390)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143636"
     Region          894..1101
                     /region_name="Guanylate_cyc"
                     /note="Adenylate and Guanylate cyclase catalytic domain;
                     pfam00211"
                     /db_xref="CDD:425528"
     Site            order(906,908..912,917,955,957..959,962,1042..1044,
                     1048..1049,1052..1053,1089)
                     /site_type="active"
                     /note="nucleotidyl binding site [active]"
                     /db_xref="CDD:143636"
     Site            order(908,959)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143636"
     Site            order(917,929,932..933,936,940,955..956,1030,1033,
                     1043..1046,1049,1089)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143636"
     CDS             1..1124
                     /gene="ADCY3"
                     /coded_by="XM_061154932.1:369..3743"
                     /db_xref="GeneID:133064609"
ORIGIN      
        1 mprtqgfsep eysaeysaey svslpsdpdr gvgrtheisv rnsgsclclp rfmrltfvpe
       61 slenlyqtyf krqrhetllv lvvfaalfdc yvvvmcavvf sgdklaplav agvglvldis
      121 lfvlckkgll pnrvtrrvvp yllwllisaq vfsylglnfs rahaasdtvg wqaffifsff
      181 itlplslspi viisvvscvv htlvlgvtva qqqqdglkgv qllreenlml silpkhvade
      241 mlkdmkkdes qkdqqqfntm ymyrhenvsi lfadivgftq lssacsaqel vkllnelfar
      301 fdklaakyhq lrikilgdcy ycicglpdyr edhavcsilm glamveaisy vrektktgvd
      361 mrvgvhtgtv lggvlgqkrw qydvwstdvt vankmeaggi pgrvhisqst mdclkgefdv
      421 epgeggsrcd yleekgiety liiaskpevk ktaaqnglng sallngalps skpsspalie
      481 tkesngsiht sgsiseelee qdaqadnpsf pnprrrlrlq dladrvvdas edehelnqll
      541 nealleresa qvvkkrntfl lsmrfmdpem etrysvekek qsgaafscsc vvllctaave
      601 ilidpwlmtn yvtfvvgeal llilticsla aifprafpkk lvafstwidr trwarntwam
      661 laifilvman vvdmlprpsl fltvsavplh pmlspsthgp glqlsclqyy tgptngtaem
      721 qvedgcvenp kyysyvavls liatimlvqv shmvkltlml liagavavin iyawcpifdd
      781 ydrkrfqqhd fpmvalekmq vfsssglngt drlplvpsky smtvmifvmm lsfyyfsrhv
      841 eklartlflw kievhdqker vyemrrwnea lvtnmlpehv arhflgskkr deelysqsyd
      901 eigvmfaslp nfadfytees innggieclr flneiisdfd slldnpkfrv itkiktigst
      961 ymaasgvtpd vntngftssn keeksdkerw qhladladfa lamkdtltni nnqsfnnfml
     1021 rigmnkggvl agvigarkph ydiwgntvnv asrmestgvm gniqvveetq vilreygfrf
     1081 vrrgpifvkg kgelltfflk grdklatfpn gasitlphqv vdns
//
LOCUS       XP_061010916             296 aa            linear   MAM 02-DEC-2023
DEFINITION  centromere protein O [Dama dama].
ACCESSION   XP_061010916
VERSION     XP_061010916.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154933.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..296
                     /product="centromere protein O"
                     /calculated_mol_wt=33619
     Region          <19..105
                     /region_name="PspA"
                     /note="Phage shock protein A [Transcription, Signal
                     transduction mechanisms]; COG1842"
                     /db_xref="CDD:441447"
     Region          100..180
                     /region_name="DRWD-N_CENP-O"
                     /note="N-terminal double-RWD domain of centromere protein
                     O (CENP-O) and related proteins; cd23835"
                     /db_xref="CDD:467668"
     Region          181..283
                     /region_name="DRWD-C_CENP-O"
                     /note="C-terminal double-RWD domain of centromere protein
                     O (CENP-O) and related proteins; cd23836"
                     /db_xref="CDD:467669"
     CDS             1..296
                     /gene="CENPO"
                     /coded_by="XM_061154933.1:298..1188"
                     /db_xref="GeneID:133064611"
ORIGIN      
        1 melantlkqd gesrggvlah lerletqvsk shknleepqd aqalearihe lerlrdnlra
       61 evkqrqarvk astasvkpdq tleiseqeil erkqenvkai lqayrftgis gkltsrgvcv
      121 cistafegnl ldsyfvdlvm ekplwihhhs vpvfipleei sakylqtntq hflfvlceyl
      181 naysgrkyqa drlqsdfaaf lvgplqrnsl cnllsftykv klegqsfpfc arllykdltt
      241 tlptdvtvts qgmealpstw eeqradhenl fftkplhqvf tsfarkgekl dislls
//
LOCUS       XP_061010917             296 aa            linear   MAM 02-DEC-2023
DEFINITION  centromere protein O [Dama dama].
ACCESSION   XP_061010917
VERSION     XP_061010917.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154934.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..296
                     /product="centromere protein O"
                     /calculated_mol_wt=33619
     Region          <19..105
                     /region_name="PspA"
                     /note="Phage shock protein A [Transcription, Signal
                     transduction mechanisms]; COG1842"
                     /db_xref="CDD:441447"
     Region          100..180
                     /region_name="DRWD-N_CENP-O"
                     /note="N-terminal double-RWD domain of centromere protein
                     O (CENP-O) and related proteins; cd23835"
                     /db_xref="CDD:467668"
     Region          181..283
                     /region_name="DRWD-C_CENP-O"
                     /note="C-terminal double-RWD domain of centromere protein
                     O (CENP-O) and related proteins; cd23836"
                     /db_xref="CDD:467669"
     CDS             1..296
                     /gene="CENPO"
                     /coded_by="XM_061154934.1:181..1071"
                     /db_xref="GeneID:133064611"
ORIGIN      
        1 melantlkqd gesrggvlah lerletqvsk shknleepqd aqalearihe lerlrdnlra
       61 evkqrqarvk astasvkpdq tleiseqeil erkqenvkai lqayrftgis gkltsrgvcv
      121 cistafegnl ldsyfvdlvm ekplwihhhs vpvfipleei sakylqtntq hflfvlceyl
      181 naysgrkyqa drlqsdfaaf lvgplqrnsl cnllsftykv klegqsfpfc arllykdltt
      241 tlptdvtvts qgmealpstw eeqradhenl fftkplhqvf tsfarkgekl dislls
//
LOCUS       XP_061010918             296 aa            linear   MAM 02-DEC-2023
DEFINITION  centromere protein O [Dama dama].
ACCESSION   XP_061010918
VERSION     XP_061010918.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154935.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..296
                     /product="centromere protein O"
                     /calculated_mol_wt=33619
     Region          <19..105
                     /region_name="PspA"
                     /note="Phage shock protein A [Transcription, Signal
                     transduction mechanisms]; COG1842"
                     /db_xref="CDD:441447"
     Region          100..180
                     /region_name="DRWD-N_CENP-O"
                     /note="N-terminal double-RWD domain of centromere protein
                     O (CENP-O) and related proteins; cd23835"
                     /db_xref="CDD:467668"
     Region          181..283
                     /region_name="DRWD-C_CENP-O"
                     /note="C-terminal double-RWD domain of centromere protein
                     O (CENP-O) and related proteins; cd23836"
                     /db_xref="CDD:467669"
     CDS             1..296
                     /gene="CENPO"
                     /coded_by="XM_061154935.1:152..1042"
                     /db_xref="GeneID:133064611"
ORIGIN      
        1 melantlkqd gesrggvlah lerletqvsk shknleepqd aqalearihe lerlrdnlra
       61 evkqrqarvk astasvkpdq tleiseqeil erkqenvkai lqayrftgis gkltsrgvcv
      121 cistafegnl ldsyfvdlvm ekplwihhhs vpvfipleei sakylqtntq hflfvlceyl
      181 naysgrkyqa drlqsdfaaf lvgplqrnsl cnllsftykv klegqsfpfc arllykdltt
      241 tlptdvtvts qgmealpstw eeqradhenl fftkplhqvf tsfarkgekl dislls
//
LOCUS       XP_061010919             296 aa            linear   MAM 02-DEC-2023
DEFINITION  centromere protein O [Dama dama].
ACCESSION   XP_061010919
VERSION     XP_061010919.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154936.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..296
                     /product="centromere protein O"
                     /calculated_mol_wt=33619
     Region          <19..105
                     /region_name="PspA"
                     /note="Phage shock protein A [Transcription, Signal
                     transduction mechanisms]; COG1842"
                     /db_xref="CDD:441447"
     Region          100..180
                     /region_name="DRWD-N_CENP-O"
                     /note="N-terminal double-RWD domain of centromere protein
                     O (CENP-O) and related proteins; cd23835"
                     /db_xref="CDD:467668"
     Region          181..283
                     /region_name="DRWD-C_CENP-O"
                     /note="C-terminal double-RWD domain of centromere protein
                     O (CENP-O) and related proteins; cd23836"
                     /db_xref="CDD:467669"
     CDS             1..296
                     /gene="CENPO"
                     /coded_by="XM_061154936.1:193..1083"
                     /db_xref="GeneID:133064611"
ORIGIN      
        1 melantlkqd gesrggvlah lerletqvsk shknleepqd aqalearihe lerlrdnlra
       61 evkqrqarvk astasvkpdq tleiseqeil erkqenvkai lqayrftgis gkltsrgvcv
      121 cistafegnl ldsyfvdlvm ekplwihhhs vpvfipleei sakylqtntq hflfvlceyl
      181 naysgrkyqa drlqsdfaaf lvgplqrnsl cnllsftykv klegqsfpfc arllykdltt
      241 tlptdvtvts qgmealpstw eeqradhenl fftkplhqvf tsfarkgekl dislls
//
LOCUS       XP_061010921             273 aa            linear   MAM 02-DEC-2023
DEFINITION  dnaJ homolog subfamily C member 27 [Dama dama].
ACCESSION   XP_061010921
VERSION     XP_061010921.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154938.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..273
                     /product="dnaJ homolog subfamily C member 27"
                     /calculated_mol_wt=30620
     Region          17..184
                     /region_name="RJL"
                     /note="Rab GTPase family J-like (RabJ-like); cd04119"
                     /db_xref="CDD:133319"
     Site            17..18
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:133319"
     Site            23..30
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:133319"
     Site            order(25..31,41,47..48,74,134..135,137,164..166)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:133319"
     Site            order(31..42,46..47)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:133319"
     Site            order(41,46..54)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:133319"
     Site            order(46,50..57,64,66)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:133319"
     Site            48
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:133319"
     Site            order(49,51..53,68,70,77..78,81,85,87..90,182)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:133319"
     Site            order(49..50,52,70..71,78,80,82..84)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:133319"
     Site            49..53
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:133319"
     Site            66..70
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:133319"
     Site            71..74
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:133319"
     Site            order(74,76..86)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:133319"
     Site            77..82
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:133319"
     Site            85..89
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:133319"
     Site            94..99
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:133319"
     Site            127..131
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:133319"
     Site            134..137
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:133319"
     Site            164..166
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:133319"
     Site            180..184
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:133319"
     Region          217..264
                     /region_name="DnaJ"
                     /note="DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock
                     protein 40) proteins are highly conserved and play crucial
                     roles in protein translation, folding, unfolding,
                     translocation, and degradation. They act primarily by
                     stimulating the ATPase activity of Hsp70s; cd06257"
                     /db_xref="CDD:99751"
     Site            order(245..247,255,258..259,262..263)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     CDS             1..273
                     /gene="DNAJC27"
                     /coded_by="XM_061154938.1:173..994"
                     /db_xref="GeneID:133064612"
ORIGIN      
        1 measmpkrke pgkslrikvi smgnaevgks ciikrycekr fvskylatig idygvtkvqv
       61 rdreikvnif dmaghpffye vrnefykdtq gvilvydvgq kdsfdaldaw laemkqdlgp
      121 hgnmenivfa vcankidctk hrcvdesegr lwaeskgfly fetsaqtgeg inemfqtfyi
      181 sivdlcengg krpntnssas ftkeqadtir rirsskdswd mlgvkpgasr devnkayrkl
      241 avllhpdkcv apgsedafka vvnartallk nik
//
LOCUS       XP_061010922             140 aa            linear   MAM 02-DEC-2023
DEFINITION  putative peptidyl-tRNA hydrolase PTRHD1 [Dama dama].
ACCESSION   XP_061010922
VERSION     XP_061010922.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154939.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..140
                     /product="putative peptidyl-tRNA hydrolase PTRHD1"
                     /calculated_mol_wt=15828
     Region          25..139
                     /region_name="PTH2_like"
                     /note="Peptidyl-tRNA hydrolase, type 2 (PTH2)_like .
                     Peptidyl-tRNA hydrolase activity releases tRNA from the
                     premature translation termination product peptidyl-tRNA.
                     Two structurally different enzymes have been reported to
                     encode such activity, Pth present in...; cd02429"
                     /db_xref="CDD:239107"
     Site            order(44,51..53,56,59..60,63,74,80,139)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:239107"
     Site            order(46,50,53,80,117)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:239107"
     Site            order(46,50,53,80,117)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:239107"
     CDS             1..140
                     /gene="PTRHD1"
                     /coded_by="XM_061154939.1:18..440"
                     /db_xref="GeneID:133064613"
ORIGIN      
        1 mhrgvgpafq lnrkmaasgg epqilvqylv lrkdlsqapf swpagavvaq achaataalh
       61 lhrdhphtaa ylrelermrk vvleapdett lkllaetlqq knidhklwme qpeniptcia
      121 lrpypkeevs qylkkfrlfk
//
LOCUS       XP_061010923             817 aa            linear   MAM 02-DEC-2023
DEFINITION  protein EFR3 homolog B isoform X1 [Dama dama].
ACCESSION   XP_061010923
VERSION     XP_061010923.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154940.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..817
                     /product="protein EFR3 homolog B isoform X1"
                     /calculated_mol_wt=92484
     CDS             1..817
                     /gene="EFR3B"
                     /coded_by="XM_061154940.1:141..2594"
                     /db_xref="GeneID:133064614"
ORIGIN      
        1 mygvcgccga lrprykrlvd nifpedpedg lvktnmeklt fyalsapekl drigaylser
       61 lirdvgrhry gyvciameal dqllmachcq sinlfvesfl kmvakllese kpnlqilgtn
      121 sfvkfaniee dtpsyhrsyd ffvsrfsemc hsshedleik tkirmsgikg lqgvvrktvn
      181 delqaniwdp qhmdkivpsl lfnlqhveea esrspsplqa pekekenpae laerclrell
      241 graafgnikn aikpvlihld nhslwepkvf aircfkiimy siqpqhshlv iqqllshlda
      301 nsrsaatvra givevlseaa viaatgsvgp tvlemfntll rqlrlsidya ltgsydgais
      361 lgtkiikehe ermfqeavik tigsfastlp tyqrsevilf imskvplpsl hhpmetgrtg
      421 enrnrltqim llksllqvst gfqsnnmmsa lpsnfldrll stalmedaei rlfvleilis
      481 fidrhgnrhk fstistlsdi silklkvdkc srqdtifmkk hsqqlyrhiy lsckeetnlq
      541 khyealygll alisielane evvvdlirlv lavqdvaqvn eenlpvynrc alyalgaayl
      601 nlisqlttvp afcqhihevi etrkkeapym lpedvfverp rlthnldgvv iellfrqski
      661 sevlggsgyn adrlcvpyip qltdedrlsk rksigetisl qvevesrnsp ekeervpaee
      721 ityetlkkai vdsvaveeqe rerrrqvvek fqkapfeeia ahcgarasll qsklnqifei
      781 tirpppspsg titaaygqpq nhsipvyemk fpdlcvy
//
LOCUS       XP_061010924             808 aa            linear   MAM 02-DEC-2023
DEFINITION  protein EFR3 homolog B isoform X2 [Dama dama].
ACCESSION   XP_061010924
VERSION     XP_061010924.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154941.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..808
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..808
                     /product="protein EFR3 homolog B isoform X2"
                     /calculated_mol_wt=91444
     CDS             1..808
                     /gene="EFR3B"
                     /coded_by="XM_061154941.1:141..2567"
                     /db_xref="GeneID:133064614"
ORIGIN      
        1 mygvcgccga lrprykrlvd nifpedpedg lvktnmeklt fyalsapekl drigaylser
       61 lirdvgrhry gyvciameal dqllmachcq sinlfvesfl kmvakllese kpnlqilgtn
      121 sfvkfaniee dtpsyhrsyd ffvsrfsemc hsshedleik tkirmsgikg lqgvvrktvn
      181 delqaniwdp qhmdkivpsl lfnlqhveea esrspsplqa pekekenpae laerclrell
      241 graafgnikn aikpvlihld nhslwepkvf aircfkiimy siqqllshld ansrsaatvr
      301 agivevlsea aviaatgsvg ptvlemfntl lrqlrlsidy altgsydgai slgtkiikeh
      361 eermfqeavi ktigsfastl ptyqrsevil fimskvplps lhhpmetgrt genrnrltqi
      421 mllksllqvs tgfqsnnmms alpsnfldrl lstalmedae irlfvleili sfidrhgnrh
      481 kfstistlsd isilklkvdk csrqdtifmk khsqqlyrhi ylsckeetnl qkhyealygl
      541 lalisielan eevvvdlirl vlavqdvaqv neenlpvynr calyalgaay lnlisqlttv
      601 pafcqhihev ietrkkeapy mlpedvfver prlthnldgv viellfrqsk isevlggsgy
      661 nadrlcvpyi pqltdedrls krksigetis lqvevesrns pekeervpae eityetlkka
      721 ivdsvaveeq ererrrqvve kfqkapfeei aahcgarasl lqsklnqife itirpppsps
      781 gtitaaygqp qnhsipvyem kfpdlcvy
//
LOCUS       XP_061010925             807 aa            linear   MAM 02-DEC-2023
DEFINITION  protein EFR3 homolog B isoform X3 [Dama dama].
ACCESSION   XP_061010925
VERSION     XP_061010925.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154942.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..807
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..807
                     /product="protein EFR3 homolog B isoform X3"
                     /calculated_mol_wt=91316
     CDS             1..807
                     /gene="EFR3B"
                     /coded_by="XM_061154942.1:141..2564"
                     /db_xref="GeneID:133064614"
ORIGIN      
        1 mygvcgccga lrprykrlvd nifpedpedg lvktnmeklt fyalsapekl drigaylser
       61 lirdvgrhry gyvciameal dqllmachcq sinlfvesfl kmvakllese kpnlqilgtn
      121 sfvkfaniee dtpsyhrsyd ffvsrfsemc hsshedleik tkirmsgikg lqgvvrktvn
      181 delqaniwdp qhmdkivpsl lfnlqhveea esrspsplqa pekekenpae laerclrell
      241 graafgnikn aikpvlihld nhslwepkvf aircfkiimy siqllshlda nsrsaatvra
      301 givevlseaa viaatgsvgp tvlemfntll rqlrlsidya ltgsydgais lgtkiikehe
      361 ermfqeavik tigsfastlp tyqrsevilf imskvplpsl hhpmetgrtg enrnrltqim
      421 llksllqvst gfqsnnmmsa lpsnfldrll stalmedaei rlfvleilis fidrhgnrhk
      481 fstistlsdi silklkvdkc srqdtifmkk hsqqlyrhiy lsckeetnlq khyealygll
      541 alisielane evvvdlirlv lavqdvaqvn eenlpvynrc alyalgaayl nlisqlttvp
      601 afcqhihevi etrkkeapym lpedvfverp rlthnldgvv iellfrqski sevlggsgyn
      661 adrlcvpyip qltdedrlsk rksigetisl qvevesrnsp ekeervpaee ityetlkkai
      721 vdsvaveeqe rerrrqvvek fqkapfeeia ahcgarasll qsklnqifei tirpppspsg
      781 titaaygqpq nhsipvyemk fpdlcvy
//
LOCUS       XP_061010926             772 aa            linear   MAM 02-DEC-2023
DEFINITION  protein EFR3 homolog B isoform X4 [Dama dama].
ACCESSION   XP_061010926
VERSION     XP_061010926.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154943.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..772
                     /product="protein EFR3 homolog B isoform X4"
                     /calculated_mol_wt=87533
     CDS             1..772
                     /gene="EFR3B"
                     /coded_by="XM_061154943.1:141..2459"
                     /db_xref="GeneID:133064614"
ORIGIN      
        1 mygvcgccga lrprykrlvd nifpedpedg lvktnmeklt fyalsapekl drigaylser
       61 lirdvgrhry gyvciameal dqllmachcq sinlfvesfl kmvakllese kpnlqilgtn
      121 sfvkfaniee dtpsyhrsyd ffvsrfsemc hsshedleik tkirmsgikg lqgvvrktvn
      181 delqaniwdp qhmdkivpsl lfnlqhveea eshldnhslw epkvfaircf kiimysiqpq
      241 hshlviqqll shldansrsa atvragivev lseaaviaat gsvgptvlem fntllrqlrl
      301 sidyaltgsy dgaislgtki ikeheermfq eaviktigsf astlptyqrs evilfimskv
      361 plpslhhpme tgrtgenrnr ltqimllksl lqvstgfqsn nmmsalpsnf ldrllstalm
      421 edaeirlfvl eilisfidrh gnrhkfstis tlsdisilkl kvdkcsrqdt ifmkkhsqql
      481 yrhiylscke etnlqkhyea lygllalisi elaneevvvd lirlvlavqd vaqvneenlp
      541 vynrcalyal gaaylnlisq lttvpafcqh ihevietrkk eapymlpedv fverprlthn
      601 ldgvviellf rqskisevlg gsgynadrlc vpyipqltde drlskrksig etislqveve
      661 srnspekeer vpaeeityet lkkaivdsva veeqererrr qvvekfqkap feeiaahcga
      721 rasllqskln qifeitirpp pspsgtitaa ygqpqnhsip vyemkfpdlc vy
//
LOCUS       XP_061010927             763 aa            linear   MAM 02-DEC-2023
DEFINITION  protein EFR3 homolog B isoform X5 [Dama dama].
ACCESSION   XP_061010927
VERSION     XP_061010927.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154944.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..763
                     /product="protein EFR3 homolog B isoform X5"
                     /calculated_mol_wt=86493
     CDS             1..763
                     /gene="EFR3B"
                     /coded_by="XM_061154944.1:141..2432"
                     /db_xref="GeneID:133064614"
ORIGIN      
        1 mygvcgccga lrprykrlvd nifpedpedg lvktnmeklt fyalsapekl drigaylser
       61 lirdvgrhry gyvciameal dqllmachcq sinlfvesfl kmvakllese kpnlqilgtn
      121 sfvkfaniee dtpsyhrsyd ffvsrfsemc hsshedleik tkirmsgikg lqgvvrktvn
      181 delqaniwdp qhmdkivpsl lfnlqhveea eshldnhslw epkvfaircf kiimysiqql
      241 lshldansrs aatvragive vlseaaviaa tgsvgptvle mfntllrqlr lsidyaltgs
      301 ydgaislgtk iikeheermf qeaviktigs fastlptyqr sevilfimsk vplpslhhpm
      361 etgrtgenrn rltqimllks llqvstgfqs nnmmsalpsn fldrllstal medaeirlfv
      421 leilisfidr hgnrhkfsti stlsdisilk lkvdkcsrqd tifmkkhsqq lyrhiylsck
      481 eetnlqkhye alygllalis ielaneevvv dlirlvlavq dvaqvneenl pvynrcalya
      541 lgaaylnlis qlttvpafcq hihevietrk keapymlped vfverprlth nldgvviell
      601 frqskisevl ggsgynadrl cvpyipqltd edrlskrksi getislqvev esrnspekee
      661 rvpaeeitye tlkkaivdsv aveeqererr rqvvekfqka pfeeiaahcg arasllqskl
      721 nqifeitirp ppspsgtita aygqpqnhsi pvyemkfpdl cvy
//
LOCUS       XP_061010928             762 aa            linear   MAM 02-DEC-2023
DEFINITION  protein EFR3 homolog B isoform X6 [Dama dama].
ACCESSION   XP_061010928
VERSION     XP_061010928.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154945.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..762
                     /product="protein EFR3 homolog B isoform X6"
                     /calculated_mol_wt=86365
     CDS             1..762
                     /gene="EFR3B"
                     /coded_by="XM_061154945.1:141..2429"
                     /db_xref="GeneID:133064614"
ORIGIN      
        1 mygvcgccga lrprykrlvd nifpedpedg lvktnmeklt fyalsapekl drigaylser
       61 lirdvgrhry gyvciameal dqllmachcq sinlfvesfl kmvakllese kpnlqilgtn
      121 sfvkfaniee dtpsyhrsyd ffvsrfsemc hsshedleik tkirmsgikg lqgvvrktvn
      181 delqaniwdp qhmdkivpsl lfnlqhveea eshldnhslw epkvfaircf kiimysiqll
      241 shldansrsa atvragivev lseaaviaat gsvgptvlem fntllrqlrl sidyaltgsy
      301 dgaislgtki ikeheermfq eaviktigsf astlptyqrs evilfimskv plpslhhpme
      361 tgrtgenrnr ltqimllksl lqvstgfqsn nmmsalpsnf ldrllstalm edaeirlfvl
      421 eilisfidrh gnrhkfstis tlsdisilkl kvdkcsrqdt ifmkkhsqql yrhiylscke
      481 etnlqkhyea lygllalisi elaneevvvd lirlvlavqd vaqvneenlp vynrcalyal
      541 gaaylnlisq lttvpafcqh ihevietrkk eapymlpedv fverprlthn ldgvviellf
      601 rqskisevlg gsgynadrlc vpyipqltde drlskrksig etislqveve srnspekeer
      661 vpaeeityet lkkaivdsva veeqererrr qvvekfqkap feeiaahcga rasllqskln
      721 qifeitirpp pspsgtitaa ygqpqnhsip vyemkfpdlc vy
//
LOCUS       XP_061010929            1040 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA (cytosine-5)-methyltransferase 3A isoform X1 [Dama dama].
ACCESSION   XP_061010929
VERSION     XP_061010929.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154946.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1040
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1040
                     /product="DNA (cytosine-5)-methyltransferase 3A isoform
                     X1"
                     /calculated_mol_wt=116497
     Region          <1..>183
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          282..415
                     /region_name="PWWP_DNMT3A"
                     /note="PWWP domain found in DNA
                     (cytosine-5)-methyltransferase 3A (DNMT3A); cd20154"
                     /db_xref="CDD:438982"
     Site            order(298,300,303,315,327,330,332..334)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438982"
     Site            301..304
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438982"
     Region          484..611
                     /region_name="ADDz_Dnmt3a"
                     /note="ADDz domain found in DNA (cytosine-5)
                     methyltransferases (C5-MTases) 3a (Dnmt3a); cd11729"
                     /db_xref="CDD:277255"
     Site            order(526,528,530..533,538..545,572..573,575,578)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:277255"
     Region          628..906
                     /region_name="Dcm"
                     /note="DNA-cytosine methylase [Replication, recombination
                     and repair]; COG0270"
                     /db_xref="CDD:440040"
     CDS             1..1040
                     /gene="DNMT3A"
                     /coded_by="XM_061154946.1:348..3470"
                     /db_xref="GeneID:133064616"
ORIGIN      
        1 mpasgpgdts gsalereeer kegeeqeear akeerqepst tarkvgrpgr krkhppvess
       61 dtpkdpavts kslsmaqdsg psellpngdl ekrsepqpee gspaggqkgg apaegegate
      121 tppeasrave ngcctpkdgr gapaeegkeq ketniesmkm egsrgrlrgg lgwesslrqr
      181 pmprltfqag dpyyiskrkr dewlarwkre aekkakviav mnaveenqgs tesqkveeas
      241 ppavqqptdp asptvattpe pvgadagdkn atkaaddepe yedgrgfgig elvwgklrgf
      301 swwpgrivsw wmtgrsraae gtrwvmwfgd gkfsvvcvek lmplssfcsa fhqatynkqp
      361 myrkaiyevl qvassragkl fpmchdsdes dtakavevqn kqmiewalgg fqpsgpkgle
      421 ppeeeknpyk evytdmwvep eaaayapppp akkprkstte kpkvkeiide rtrerlvyev
      481 rqkcrniedi ciscgslnvt lehplfiggm cqnckncfle cayqydddgy qsycticcgg
      541 revlmcgnnn ccrcfcvecv dllvgpgaaq aaikedpwnc ymcghkgtyg llrrrddwps
      601 rlqmffannh dqefdppkvy ppvpaekrkp irvlslfdgi atgllvlkdl giqvdryias
      661 evcedsitvg mvrhqgkimy vgdvrsvtqk hiqewgpfdl viggspcndl sivnparkgl
      721 yegtgrlffe fyrllhdarp kegddrpffw lfenvvamgv sdkrdisrfl esnpvmidak
      781 evsaahrary fwgnlpgmnr plastvndkl elqeclehgr iakfskvrti ttrsnsikqg
      841 kdqhfpvfmn ekedilwcte mervfgfpvh ytdvsnmsrl arqrllgrsw svpvirhlfa
      901 plkeyfallg lmkavllprv gstwspkctt lgsashrgrr pgvgddfalt pagehfdctf
      961 haakcrtysp tlpfpalfpf ssvplltlcc cccfffflvp asfhhcifff fffffrvasl
     1021 fidnnnvhft vwfwdigegv
//
LOCUS       XP_061010930            1040 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA (cytosine-5)-methyltransferase 3A isoform X1 [Dama dama].
ACCESSION   XP_061010930
VERSION     XP_061010930.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154947.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1040
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1040
                     /product="DNA (cytosine-5)-methyltransferase 3A isoform
                     X1"
                     /calculated_mol_wt=116497
     Region          <1..>183
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          282..415
                     /region_name="PWWP_DNMT3A"
                     /note="PWWP domain found in DNA
                     (cytosine-5)-methyltransferase 3A (DNMT3A); cd20154"
                     /db_xref="CDD:438982"
     Site            order(298,300,303,315,327,330,332..334)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438982"
     Site            301..304
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438982"
     Region          484..611
                     /region_name="ADDz_Dnmt3a"
                     /note="ADDz domain found in DNA (cytosine-5)
                     methyltransferases (C5-MTases) 3a (Dnmt3a); cd11729"
                     /db_xref="CDD:277255"
     Site            order(526,528,530..533,538..545,572..573,575,578)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:277255"
     Region          628..906
                     /region_name="Dcm"
                     /note="DNA-cytosine methylase [Replication, recombination
                     and repair]; COG0270"
                     /db_xref="CDD:440040"
     CDS             1..1040
                     /gene="DNMT3A"
                     /coded_by="XM_061154947.1:281..3403"
                     /db_xref="GeneID:133064616"
ORIGIN      
        1 mpasgpgdts gsalereeer kegeeqeear akeerqepst tarkvgrpgr krkhppvess
       61 dtpkdpavts kslsmaqdsg psellpngdl ekrsepqpee gspaggqkgg apaegegate
      121 tppeasrave ngcctpkdgr gapaeegkeq ketniesmkm egsrgrlrgg lgwesslrqr
      181 pmprltfqag dpyyiskrkr dewlarwkre aekkakviav mnaveenqgs tesqkveeas
      241 ppavqqptdp asptvattpe pvgadagdkn atkaaddepe yedgrgfgig elvwgklrgf
      301 swwpgrivsw wmtgrsraae gtrwvmwfgd gkfsvvcvek lmplssfcsa fhqatynkqp
      361 myrkaiyevl qvassragkl fpmchdsdes dtakavevqn kqmiewalgg fqpsgpkgle
      421 ppeeeknpyk evytdmwvep eaaayapppp akkprkstte kpkvkeiide rtrerlvyev
      481 rqkcrniedi ciscgslnvt lehplfiggm cqnckncfle cayqydddgy qsycticcgg
      541 revlmcgnnn ccrcfcvecv dllvgpgaaq aaikedpwnc ymcghkgtyg llrrrddwps
      601 rlqmffannh dqefdppkvy ppvpaekrkp irvlslfdgi atgllvlkdl giqvdryias
      661 evcedsitvg mvrhqgkimy vgdvrsvtqk hiqewgpfdl viggspcndl sivnparkgl
      721 yegtgrlffe fyrllhdarp kegddrpffw lfenvvamgv sdkrdisrfl esnpvmidak
      781 evsaahrary fwgnlpgmnr plastvndkl elqeclehgr iakfskvrti ttrsnsikqg
      841 kdqhfpvfmn ekedilwcte mervfgfpvh ytdvsnmsrl arqrllgrsw svpvirhlfa
      901 plkeyfallg lmkavllprv gstwspkctt lgsashrgrr pgvgddfalt pagehfdctf
      961 haakcrtysp tlpfpalfpf ssvplltlcc cccfffflvp asfhhcifff fffffrvasl
     1021 fidnnnvhft vwfwdigegv
//
LOCUS       XP_061010931            1040 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA (cytosine-5)-methyltransferase 3A isoform X1 [Dama dama].
ACCESSION   XP_061010931
VERSION     XP_061010931.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154948.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1040
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1040
                     /product="DNA (cytosine-5)-methyltransferase 3A isoform
                     X1"
                     /calculated_mol_wt=116497
     Region          <1..>183
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          282..415
                     /region_name="PWWP_DNMT3A"
                     /note="PWWP domain found in DNA
                     (cytosine-5)-methyltransferase 3A (DNMT3A); cd20154"
                     /db_xref="CDD:438982"
     Site            order(298,300,303,315,327,330,332..334)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438982"
     Site            301..304
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438982"
     Region          484..611
                     /region_name="ADDz_Dnmt3a"
                     /note="ADDz domain found in DNA (cytosine-5)
                     methyltransferases (C5-MTases) 3a (Dnmt3a); cd11729"
                     /db_xref="CDD:277255"
     Site            order(526,528,530..533,538..545,572..573,575,578)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:277255"
     Region          628..906
                     /region_name="Dcm"
                     /note="DNA-cytosine methylase [Replication, recombination
                     and repair]; COG0270"
                     /db_xref="CDD:440040"
     CDS             1..1040
                     /gene="DNMT3A"
                     /coded_by="XM_061154948.1:1165..4287"
                     /db_xref="GeneID:133064616"
ORIGIN      
        1 mpasgpgdts gsalereeer kegeeqeear akeerqepst tarkvgrpgr krkhppvess
       61 dtpkdpavts kslsmaqdsg psellpngdl ekrsepqpee gspaggqkgg apaegegate
      121 tppeasrave ngcctpkdgr gapaeegkeq ketniesmkm egsrgrlrgg lgwesslrqr
      181 pmprltfqag dpyyiskrkr dewlarwkre aekkakviav mnaveenqgs tesqkveeas
      241 ppavqqptdp asptvattpe pvgadagdkn atkaaddepe yedgrgfgig elvwgklrgf
      301 swwpgrivsw wmtgrsraae gtrwvmwfgd gkfsvvcvek lmplssfcsa fhqatynkqp
      361 myrkaiyevl qvassragkl fpmchdsdes dtakavevqn kqmiewalgg fqpsgpkgle
      421 ppeeeknpyk evytdmwvep eaaayapppp akkprkstte kpkvkeiide rtrerlvyev
      481 rqkcrniedi ciscgslnvt lehplfiggm cqnckncfle cayqydddgy qsycticcgg
      541 revlmcgnnn ccrcfcvecv dllvgpgaaq aaikedpwnc ymcghkgtyg llrrrddwps
      601 rlqmffannh dqefdppkvy ppvpaekrkp irvlslfdgi atgllvlkdl giqvdryias
      661 evcedsitvg mvrhqgkimy vgdvrsvtqk hiqewgpfdl viggspcndl sivnparkgl
      721 yegtgrlffe fyrllhdarp kegddrpffw lfenvvamgv sdkrdisrfl esnpvmidak
      781 evsaahrary fwgnlpgmnr plastvndkl elqeclehgr iakfskvrti ttrsnsikqg
      841 kdqhfpvfmn ekedilwcte mervfgfpvh ytdvsnmsrl arqrllgrsw svpvirhlfa
      901 plkeyfallg lmkavllprv gstwspkctt lgsashrgrr pgvgddfalt pagehfdctf
      961 haakcrtysp tlpfpalfpf ssvplltlcc cccfffflvp asfhhcifff fffffrvasl
     1021 fidnnnvhft vwfwdigegv
//
LOCUS       XP_061010932            1040 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA (cytosine-5)-methyltransferase 3A isoform X1 [Dama dama].
ACCESSION   XP_061010932
VERSION     XP_061010932.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154949.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1040
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1040
                     /product="DNA (cytosine-5)-methyltransferase 3A isoform
                     X1"
                     /calculated_mol_wt=116497
     Region          <1..>183
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          282..415
                     /region_name="PWWP_DNMT3A"
                     /note="PWWP domain found in DNA
                     (cytosine-5)-methyltransferase 3A (DNMT3A); cd20154"
                     /db_xref="CDD:438982"
     Site            order(298,300,303,315,327,330,332..334)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438982"
     Site            301..304
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438982"
     Region          484..611
                     /region_name="ADDz_Dnmt3a"
                     /note="ADDz domain found in DNA (cytosine-5)
                     methyltransferases (C5-MTases) 3a (Dnmt3a); cd11729"
                     /db_xref="CDD:277255"
     Site            order(526,528,530..533,538..545,572..573,575,578)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:277255"
     Region          628..906
                     /region_name="Dcm"
                     /note="DNA-cytosine methylase [Replication, recombination
                     and repair]; COG0270"
                     /db_xref="CDD:440040"
     CDS             1..1040
                     /gene="DNMT3A"
                     /coded_by="XM_061154949.1:328..3450"
                     /db_xref="GeneID:133064616"
ORIGIN      
        1 mpasgpgdts gsalereeer kegeeqeear akeerqepst tarkvgrpgr krkhppvess
       61 dtpkdpavts kslsmaqdsg psellpngdl ekrsepqpee gspaggqkgg apaegegate
      121 tppeasrave ngcctpkdgr gapaeegkeq ketniesmkm egsrgrlrgg lgwesslrqr
      181 pmprltfqag dpyyiskrkr dewlarwkre aekkakviav mnaveenqgs tesqkveeas
      241 ppavqqptdp asptvattpe pvgadagdkn atkaaddepe yedgrgfgig elvwgklrgf
      301 swwpgrivsw wmtgrsraae gtrwvmwfgd gkfsvvcvek lmplssfcsa fhqatynkqp
      361 myrkaiyevl qvassragkl fpmchdsdes dtakavevqn kqmiewalgg fqpsgpkgle
      421 ppeeeknpyk evytdmwvep eaaayapppp akkprkstte kpkvkeiide rtrerlvyev
      481 rqkcrniedi ciscgslnvt lehplfiggm cqnckncfle cayqydddgy qsycticcgg
      541 revlmcgnnn ccrcfcvecv dllvgpgaaq aaikedpwnc ymcghkgtyg llrrrddwps
      601 rlqmffannh dqefdppkvy ppvpaekrkp irvlslfdgi atgllvlkdl giqvdryias
      661 evcedsitvg mvrhqgkimy vgdvrsvtqk hiqewgpfdl viggspcndl sivnparkgl
      721 yegtgrlffe fyrllhdarp kegddrpffw lfenvvamgv sdkrdisrfl esnpvmidak
      781 evsaahrary fwgnlpgmnr plastvndkl elqeclehgr iakfskvrti ttrsnsikqg
      841 kdqhfpvfmn ekedilwcte mervfgfpvh ytdvsnmsrl arqrllgrsw svpvirhlfa
      901 plkeyfallg lmkavllprv gstwspkctt lgsashrgrr pgvgddfalt pagehfdctf
      961 haakcrtysp tlpfpalfpf ssvplltlcc cccfffflvp asfhhcifff fffffrvasl
     1021 fidnnnvhft vwfwdigegv
//
LOCUS       XP_061010933             985 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA (cytosine-5)-methyltransferase 3A isoform X2 [Dama dama].
ACCESSION   XP_061010933
VERSION     XP_061010933.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154950.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..985
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..985
                     /product="DNA (cytosine-5)-methyltransferase 3A isoform
                     X2"
                     /calculated_mol_wt=110404
     Region          227..360
                     /region_name="PWWP_DNMT3A"
                     /note="PWWP domain found in DNA
                     (cytosine-5)-methyltransferase 3A (DNMT3A); cd20154"
                     /db_xref="CDD:438982"
     Site            order(243,245,248,260,272,275,277..279)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438982"
     Site            246..249
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438982"
     Region          429..556
                     /region_name="ADDz_Dnmt3a"
                     /note="ADDz domain found in DNA (cytosine-5)
                     methyltransferases (C5-MTases) 3a (Dnmt3a); cd11729"
                     /db_xref="CDD:277255"
     Site            order(471,473,475..478,483..490,517..518,520,523)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:277255"
     Region          573..851
                     /region_name="Dcm"
                     /note="DNA-cytosine methylase [Replication, recombination
                     and repair]; COG0270"
                     /db_xref="CDD:440040"
     CDS             1..985
                     /gene="DNMT3A"
                     /coded_by="XM_061154950.1:88..3045"
                     /db_xref="GeneID:133064616"
ORIGIN      
        1 mvessdtpkd pavtskslsm aqdsgpsell pngdlekrse pqpeegspag gqkggapaeg
       61 egatetppea sravengcct pkdgrgapae egkeqketni esmkmegsrg rlrgglgwes
      121 slrqrpmprl tfqagdpyyi skrkrdewla rwkreaekka kviavmnave enqgstesqk
      181 veeasppavq qptdpasptv attpepvgad agdknatkaa ddepeyedgr gfgigelvwg
      241 klrgfswwpg rivswwmtgr sraaegtrwv mwfgdgkfsv vcveklmpls sfcsafhqat
      301 ynkqpmyrka iyevlqvass ragklfpmch dsdesdtaka vevqnkqmie walggfqpsg
      361 pkgleppeee knpykevytd mwvepeaaay appppakkpr ksttekpkvk eiidertrer
      421 lvyevrqkcr niediciscg slnvtlehpl figgmcqnck ncflecayqy dddgyqsyct
      481 iccggrevlm cgnnnccrcf cvecvdllvg pgaaqaaike dpwncymcgh kgtygllrrr
      541 ddwpsrlqmf fannhdqefd ppkvyppvpa ekrkpirvls lfdgiatgll vlkdlgiqvd
      601 ryiasevced sitvgmvrhq gkimyvgdvr svtqkhiqew gpfdlviggs pcndlsivnp
      661 arkglyegtg rlffefyrll hdarpkegdd rpffwlfenv vamgvsdkrd isrflesnpv
      721 midakevsaa hraryfwgnl pgmnrplast vndklelqec lehgriakfs kvrtittrsn
      781 sikqgkdqhf pvfmnekedi lwctemervf gfpvhytdvs nmsrlarqrl lgrswsvpvi
      841 rhlfaplkey fallglmkav llprvgstws pkcttlgsas hrgrrpgvgd dfaltpageh
      901 fdctfhaakc rtysptlpfp alfpfssvpl ltlcccccff fflvpasfhh ciffffffff
      961 rvaslfidnn nvhftvwfwd igegv
//
LOCUS       XP_061010935             965 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA (cytosine-5)-methyltransferase 3A isoform X3 [Dama dama].
ACCESSION   XP_061010935
VERSION     XP_061010935.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154952.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..965
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..965
                     /product="DNA (cytosine-5)-methyltransferase 3A isoform
                     X3"
                     /calculated_mol_wt=107689
     Region          <1..>183
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          282..415
                     /region_name="PWWP_DNMT3A"
                     /note="PWWP domain found in DNA
                     (cytosine-5)-methyltransferase 3A (DNMT3A); cd20154"
                     /db_xref="CDD:438982"
     Site            order(298,300,303,315,327,330,332..334)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438982"
     Site            301..304
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438982"
     Region          484..611
                     /region_name="ADDz_Dnmt3a"
                     /note="ADDz domain found in DNA (cytosine-5)
                     methyltransferases (C5-MTases) 3a (Dnmt3a); cd11729"
                     /db_xref="CDD:277255"
     Site            order(526,528,530..533,538..545,572..573,575,578)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:277255"
     Region          628..906
                     /region_name="Dcm"
                     /note="DNA-cytosine methylase [Replication, recombination
                     and repair]; COG0270"
                     /db_xref="CDD:440040"
     CDS             1..965
                     /gene="DNMT3A"
                     /coded_by="XM_061154952.1:348..3245"
                     /db_xref="GeneID:133064616"
ORIGIN      
        1 mpasgpgdts gsalereeer kegeeqeear akeerqepst tarkvgrpgr krkhppvess
       61 dtpkdpavts kslsmaqdsg psellpngdl ekrsepqpee gspaggqkgg apaegegate
      121 tppeasrave ngcctpkdgr gapaeegkeq ketniesmkm egsrgrlrgg lgwesslrqr
      181 pmprltfqag dpyyiskrkr dewlarwkre aekkakviav mnaveenqgs tesqkveeas
      241 ppavqqptdp asptvattpe pvgadagdkn atkaaddepe yedgrgfgig elvwgklrgf
      301 swwpgrivsw wmtgrsraae gtrwvmwfgd gkfsvvcvek lmplssfcsa fhqatynkqp
      361 myrkaiyevl qvassragkl fpmchdsdes dtakavevqn kqmiewalgg fqpsgpkgle
      421 ppeeeknpyk evytdmwvep eaaayapppp akkprkstte kpkvkeiide rtrerlvyev
      481 rqkcrniedi ciscgslnvt lehplfiggm cqnckncfle cayqydddgy qsycticcgg
      541 revlmcgnnn ccrcfcvecv dllvgpgaaq aaikedpwnc ymcghkgtyg llrrrddwps
      601 rlqmffannh dqefdppkvy ppvpaekrkp irvlslfdgi atgllvlkdl giqvdryias
      661 evcedsitvg mvrhqgkimy vgdvrsvtqk hiqewgpfdl viggspcndl sivnparkgl
      721 yegtgrlffe fyrllhdarp kegddrpffw lfenvvamgv sdkrdisrfl esnpvmidak
      781 evsaahrary fwgnlpgmnr plastvndkl elqeclehgr iakfskvrti ttrsnsikqg
      841 kdqhfpvfmn ekedilwcte mervfgfpvh ytdvsnmsrl arqrllgrsw svpvirhlfa
      901 plkeyfallg lmkavllprv gstwspkctt lgsashrgrr pgvggrqgwc gwlqgegptg
      961 rrlpe
//
LOCUS       XP_061010936             957 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA (cytosine-5)-methyltransferase 3A isoform X4 [Dama dama].
ACCESSION   XP_061010936
VERSION     XP_061010936.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154953.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..957
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..957
                     /product="DNA (cytosine-5)-methyltransferase 3A isoform
                     X4"
                     /calculated_mol_wt=107551
     Region          <1..>183
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          282..415
                     /region_name="PWWP_DNMT3A"
                     /note="PWWP domain found in DNA
                     (cytosine-5)-methyltransferase 3A (DNMT3A); cd20154"
                     /db_xref="CDD:438982"
     Site            order(298,300,303,315,327,330,332..334)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438982"
     Site            301..304
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438982"
     Region          484..611
                     /region_name="ADDz_Dnmt3a"
                     /note="ADDz domain found in DNA (cytosine-5)
                     methyltransferases (C5-MTases) 3a (Dnmt3a); cd11729"
                     /db_xref="CDD:277255"
     Site            order(526,528,530..533,538..545,572..573,575,578)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:277255"
     Region          628..906
                     /region_name="Dcm"
                     /note="DNA-cytosine methylase [Replication, recombination
                     and repair]; COG0270"
                     /db_xref="CDD:440040"
     CDS             1..957
                     /gene="DNMT3A"
                     /coded_by="XM_061154953.1:348..3221"
                     /db_xref="GeneID:133064616"
ORIGIN      
        1 mpasgpgdts gsalereeer kegeeqeear akeerqepst tarkvgrpgr krkhppvess
       61 dtpkdpavts kslsmaqdsg psellpngdl ekrsepqpee gspaggqkgg apaegegate
      121 tppeasrave ngcctpkdgr gapaeegkeq ketniesmkm egsrgrlrgg lgwesslrqr
      181 pmprltfqag dpyyiskrkr dewlarwkre aekkakviav mnaveenqgs tesqkveeas
      241 ppavqqptdp asptvattpe pvgadagdkn atkaaddepe yedgrgfgig elvwgklrgf
      301 swwpgrivsw wmtgrsraae gtrwvmwfgd gkfsvvcvek lmplssfcsa fhqatynkqp
      361 myrkaiyevl qvassragkl fpmchdsdes dtakavevqn kqmiewalgg fqpsgpkgle
      421 ppeeeknpyk evytdmwvep eaaayapppp akkprkstte kpkvkeiide rtrerlvyev
      481 rqkcrniedi ciscgslnvt lehplfiggm cqnckncfle cayqydddgy qsycticcgg
      541 revlmcgnnn ccrcfcvecv dllvgpgaaq aaikedpwnc ymcghkgtyg llrrrddwps
      601 rlqmffannh dqefdppkvy ppvpaekrkp irvlslfdgi atgllvlkdl giqvdryias
      661 evcedsitvg mvrhqgkimy vgdvrsvtqk hiqewgpfdl viggspcndl sivnparkgl
      721 yegtgrlffe fyrllhdarp kegddrpffw lfenvvamgv sdkrdisrfl esnpvmidak
      781 evsaahrary fwgnlpgmnr plastvndkl elqeclehgr iakfskvrti ttrsnsikqg
      841 kdqhfpvfmn ekedilwcte mervfgfpvh ytdvsnmsrl arqrllgrsw svpvirhlfa
      901 plkeyfacvt wsdescalts srqhlepqvh dtwfrfpprq aawrwrrfrf dpggral
//
LOCUS       XP_061010937             955 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA (cytosine-5)-methyltransferase 3A isoform X5 [Dama dama].
ACCESSION   XP_061010937
VERSION     XP_061010937.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154954.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..955
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..955
                     /product="DNA (cytosine-5)-methyltransferase 3A isoform
                     X5"
                     /calculated_mol_wt=106548
     Region          <1..>183
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          282..415
                     /region_name="PWWP_DNMT3A"
                     /note="PWWP domain found in DNA
                     (cytosine-5)-methyltransferase 3A (DNMT3A); cd20154"
                     /db_xref="CDD:438982"
     Site            order(298,300,303,315,327,330,332..334)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438982"
     Site            301..304
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438982"
     Region          484..611
                     /region_name="ADDz_Dnmt3a"
                     /note="ADDz domain found in DNA (cytosine-5)
                     methyltransferases (C5-MTases) 3a (Dnmt3a); cd11729"
                     /db_xref="CDD:277255"
     Site            order(526,528,530..533,538..545,572..573,575,578)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:277255"
     Region          628..906
                     /region_name="Dcm"
                     /note="DNA-cytosine methylase [Replication, recombination
                     and repair]; COG0270"
                     /db_xref="CDD:440040"
     CDS             1..955
                     /gene="DNMT3A"
                     /coded_by="XM_061154954.1:348..3215"
                     /db_xref="GeneID:133064616"
ORIGIN      
        1 mpasgpgdts gsalereeer kegeeqeear akeerqepst tarkvgrpgr krkhppvess
       61 dtpkdpavts kslsmaqdsg psellpngdl ekrsepqpee gspaggqkgg apaegegate
      121 tppeasrave ngcctpkdgr gapaeegkeq ketniesmkm egsrgrlrgg lgwesslrqr
      181 pmprltfqag dpyyiskrkr dewlarwkre aekkakviav mnaveenqgs tesqkveeas
      241 ppavqqptdp asptvattpe pvgadagdkn atkaaddepe yedgrgfgig elvwgklrgf
      301 swwpgrivsw wmtgrsraae gtrwvmwfgd gkfsvvcvek lmplssfcsa fhqatynkqp
      361 myrkaiyevl qvassragkl fpmchdsdes dtakavevqn kqmiewalgg fqpsgpkgle
      421 ppeeeknpyk evytdmwvep eaaayapppp akkprkstte kpkvkeiide rtrerlvyev
      481 rqkcrniedi ciscgslnvt lehplfiggm cqnckncfle cayqydddgy qsycticcgg
      541 revlmcgnnn ccrcfcvecv dllvgpgaaq aaikedpwnc ymcghkgtyg llrrrddwps
      601 rlqmffannh dqefdppkvy ppvpaekrkp irvlslfdgi atgllvlkdl giqvdryias
      661 evcedsitvg mvrhqgkimy vgdvrsvtqk hiqewgpfdl viggspcndl sivnparkgl
      721 yegtgrlffe fyrllhdarp kegddrpffw lfenvvamgv sdkrdisrfl esnpvmidak
      781 evsaahrary fwgnlpgmnr plastvndkl elqeclehgr iakfskvrti ttrsnsikqg
      841 kdqhfpvfmn ekedilwcte mervfgfpvh ytdvsnmsrl arqrllgrsw svpvirhlfa
      901 plkeyfallg lmkavllprv gstwspkctt lgsashrgrr pgvggrlsip evarc
//
LOCUS       XP_061010938             946 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA (cytosine-5)-methyltransferase 3A isoform X6 [Dama dama].
ACCESSION   XP_061010938
VERSION     XP_061010938.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154955.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..946
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..946
                     /product="DNA (cytosine-5)-methyltransferase 3A isoform
                     X6"
                     /calculated_mol_wt=106278
     Region          <1..>183
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          282..415
                     /region_name="PWWP_DNMT3A"
                     /note="PWWP domain found in DNA
                     (cytosine-5)-methyltransferase 3A (DNMT3A); cd20154"
                     /db_xref="CDD:438982"
     Site            order(298,300,303,315,327,330,332..334)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438982"
     Site            301..304
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438982"
     Region          484..611
                     /region_name="ADDz_Dnmt3a"
                     /note="ADDz domain found in DNA (cytosine-5)
                     methyltransferases (C5-MTases) 3a (Dnmt3a); cd11729"
                     /db_xref="CDD:277255"
     Site            order(526,528,530..533,538..545,572..573,575,578)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:277255"
     Region          628..906
                     /region_name="Dcm"
                     /note="DNA-cytosine methylase [Replication, recombination
                     and repair]; COG0270"
                     /db_xref="CDD:440040"
     CDS             1..946
                     /gene="DNMT3A"
                     /coded_by="XM_061154955.1:348..3188"
                     /db_xref="GeneID:133064616"
ORIGIN      
        1 mpasgpgdts gsalereeer kegeeqeear akeerqepst tarkvgrpgr krkhppvess
       61 dtpkdpavts kslsmaqdsg psellpngdl ekrsepqpee gspaggqkgg apaegegate
      121 tppeasrave ngcctpkdgr gapaeegkeq ketniesmkm egsrgrlrgg lgwesslrqr
      181 pmprltfqag dpyyiskrkr dewlarwkre aekkakviav mnaveenqgs tesqkveeas
      241 ppavqqptdp asptvattpe pvgadagdkn atkaaddepe yedgrgfgig elvwgklrgf
      301 swwpgrivsw wmtgrsraae gtrwvmwfgd gkfsvvcvek lmplssfcsa fhqatynkqp
      361 myrkaiyevl qvassragkl fpmchdsdes dtakavevqn kqmiewalgg fqpsgpkgle
      421 ppeeeknpyk evytdmwvep eaaayapppp akkprkstte kpkvkeiide rtrerlvyev
      481 rqkcrniedi ciscgslnvt lehplfiggm cqnckncfle cayqydddgy qsycticcgg
      541 revlmcgnnn ccrcfcvecv dllvgpgaaq aaikedpwnc ymcghkgtyg llrrrddwps
      601 rlqmffannh dqefdppkvy ppvpaekrkp irvlslfdgi atgllvlkdl giqvdryias
      661 evcedsitvg mvrhqgkimy vgdvrsvtqk hiqewgpfdl viggspcndl sivnparkgl
      721 yegtgrlffe fyrllhdarp kegddrpffw lfenvvamgv sdkrdisrfl esnpvmidak
      781 evsaahrary fwgnlpgmnr plastvndkl elqeclehgr iakfskvrti ttrsnsikqg
      841 kdqhfpvfmn ekedilwcte mervfgfpvh ytdvsnmsrl arqrllgrsw svpvirhlfa
      901 plkeyfacvt wsdescalts srqhlepqvh dtwfrfpprq aawrwr
//
LOCUS       XP_061010939             909 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA (cytosine-5)-methyltransferase 3A isoform X7 [Dama dama].
ACCESSION   XP_061010939
VERSION     XP_061010939.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154956.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..909
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..909
                     /product="DNA (cytosine-5)-methyltransferase 3A isoform
                     X7"
                     /calculated_mol_wt=101726
     Region          <1..>183
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          282..415
                     /region_name="PWWP_DNMT3A"
                     /note="PWWP domain found in DNA
                     (cytosine-5)-methyltransferase 3A (DNMT3A); cd20154"
                     /db_xref="CDD:438982"
     Site            order(298,300,303,315,327,330,332..334)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438982"
     Site            301..304
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438982"
     Region          484..611
                     /region_name="ADDz_Dnmt3a"
                     /note="ADDz domain found in DNA (cytosine-5)
                     methyltransferases (C5-MTases) 3a (Dnmt3a); cd11729"
                     /db_xref="CDD:277255"
     Site            order(526,528,530..533,538..545,572..573,575,578)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:277255"
     Region          628..906
                     /region_name="Dcm"
                     /note="DNA-cytosine methylase [Replication, recombination
                     and repair]; COG0270"
                     /db_xref="CDD:440040"
     CDS             1..909
                     /gene="DNMT3A"
                     /coded_by="XM_061154956.1:347..3076"
                     /db_xref="GeneID:133064616"
ORIGIN      
        1 mpasgpgdts gsalereeer kegeeqeear akeerqepst tarkvgrpgr krkhppvess
       61 dtpkdpavts kslsmaqdsg psellpngdl ekrsepqpee gspaggqkgg apaegegate
      121 tppeasrave ngcctpkdgr gapaeegkeq ketniesmkm egsrgrlrgg lgwesslrqr
      181 pmprltfqag dpyyiskrkr dewlarwkre aekkakviav mnaveenqgs tesqkveeas
      241 ppavqqptdp asptvattpe pvgadagdkn atkaaddepe yedgrgfgig elvwgklrgf
      301 swwpgrivsw wmtgrsraae gtrwvmwfgd gkfsvvcvek lmplssfcsa fhqatynkqp
      361 myrkaiyevl qvassragkl fpmchdsdes dtakavevqn kqmiewalgg fqpsgpkgle
      421 ppeeeknpyk evytdmwvep eaaayapppp akkprkstte kpkvkeiide rtrerlvyev
      481 rqkcrniedi ciscgslnvt lehplfiggm cqnckncfle cayqydddgy qsycticcgg
      541 revlmcgnnn ccrcfcvecv dllvgpgaaq aaikedpwnc ymcghkgtyg llrrrddwps
      601 rlqmffannh dqefdppkvy ppvpaekrkp irvlslfdgi atgllvlkdl giqvdryias
      661 evcedsitvg mvrhqgkimy vgdvrsvtqk hiqewgpfdl viggspcndl sivnparkgl
      721 yegtgrlffe fyrllhdarp kegddrpffw lfenvvamgv sdkrdisrfl esnpvmidak
      781 evsaahrary fwgnlpgmnr plastvndkl elqeclehgr iakfskvrti ttrsnsikqg
      841 kdqhfpvfmn ekedilwcte mervfgfpvh ytdvsnmsrl arqrllgrsw svpvirhlfa
      901 plkeyfacv
//
LOCUS       XP_061010940             820 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA (cytosine-5)-methyltransferase 3A isoform X8 [Dama dama].
ACCESSION   XP_061010940
VERSION     XP_061010940.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154957.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..820
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..820
                     /product="DNA (cytosine-5)-methyltransferase 3A isoform
                     X8"
                     /calculated_mol_wt=92583
     Region          62..195
                     /region_name="PWWP_DNMT3A"
                     /note="PWWP domain found in DNA
                     (cytosine-5)-methyltransferase 3A (DNMT3A); cd20154"
                     /db_xref="CDD:438982"
     Site            order(78,80,83,95,107,110,112..114)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438982"
     Site            81..84
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438982"
     Region          264..391
                     /region_name="ADDz_Dnmt3a"
                     /note="ADDz domain found in DNA (cytosine-5)
                     methyltransferases (C5-MTases) 3a (Dnmt3a); cd11729"
                     /db_xref="CDD:277255"
     Site            order(306,308,310..313,318..325,352..353,355,358)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:277255"
     Region          408..686
                     /region_name="Dcm"
                     /note="DNA-cytosine methylase [Replication, recombination
                     and repair]; COG0270"
                     /db_xref="CDD:440040"
     CDS             1..820
                     /gene="DNMT3A"
                     /coded_by="XM_061154957.1:93..2555"
                     /db_xref="GeneID:133064616"
ORIGIN      
        1 mnaveenqgs tesqkveeas ppavqqptdp asptvattpe pvgadagdkn atkaaddepe
       61 yedgrgfgig elvwgklrgf swwpgrivsw wmtgrsraae gtrwvmwfgd gkfsvvcvek
      121 lmplssfcsa fhqatynkqp myrkaiyevl qvassragkl fpmchdsdes dtakavevqn
      181 kqmiewalgg fqpsgpkgle ppeeeknpyk evytdmwvep eaaayapppp akkprkstte
      241 kpkvkeiide rtrerlvyev rqkcrniedi ciscgslnvt lehplfiggm cqnckncfle
      301 cayqydddgy qsycticcgg revlmcgnnn ccrcfcvecv dllvgpgaaq aaikedpwnc
      361 ymcghkgtyg llrrrddwps rlqmffannh dqefdppkvy ppvpaekrkp irvlslfdgi
      421 atgllvlkdl giqvdryias evcedsitvg mvrhqgkimy vgdvrsvtqk hiqewgpfdl
      481 viggspcndl sivnparkgl yegtgrlffe fyrllhdarp kegddrpffw lfenvvamgv
      541 sdkrdisrfl esnpvmidak evsaahrary fwgnlpgmnr plastvndkl elqeclehgr
      601 iakfskvrti ttrsnsikqg kdqhfpvfmn ekedilwcte mervfgfpvh ytdvsnmsrl
      661 arqrllgrsw svpvirhlfa plkeyfallg lmkavllprv gstwspkctt lgsashrgrr
      721 pgvgddfalt pagehfdctf haakcrtysp tlpfpalfpf ssvplltlcc cccfffflvp
      781 asfhhcifff fffffrvasl fidnnnvhft vwfwdigegv
//
LOCUS       XP_061010941             627 aa            linear   MAM 02-DEC-2023
DEFINITION  dystrobrevin beta isoform X1 [Dama dama].
ACCESSION   XP_061010941
VERSION     XP_061010941.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154958.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..627
                     /product="dystrobrevin beta isoform X1"
                     /calculated_mol_wt=71109
     Region          54..214
                     /region_name="EFh_DTN"
                     /note="EF-hand-like motif found in dystrobrevins and
                     similar proteins; cd16244"
                     /db_xref="CDD:320002"
     Region          54..95
                     /region_name="EF-hand-like motif"
                     /note="EF-hand-like motif [structural motif]"
                     /db_xref="CDD:320002"
     Region          104..138
                     /region_name="EF-hand-like motif"
                     /note="EF-hand-like motif [structural motif]"
                     /db_xref="CDD:320002"
     Region          144..180
                     /region_name="EF-hand-like motif"
                     /note="EF-hand-like motif [structural motif]"
                     /db_xref="CDD:320002"
     Region          191..214
                     /region_name="EF-hand-like motif"
                     /note="EF-hand-like motif [structural motif]"
                     /db_xref="CDD:320002"
     Region          241..289
                     /region_name="ZZ_dystrophin"
                     /note="Zinc finger, ZZ type. Zinc finger present in
                     dystrophin and dystrobrevin. The ZZ motif coordinates two
                     zinc ions and most likely participates in ligand binding
                     or molecular scaffolding. Dystrophin attaches actin
                     filaments to an integral membrane...; cd02334"
                     /db_xref="CDD:239074"
     Site            order(243,246,258,261,267,270,280,284)
                     /site_type="other"
                     /note="Zinc-binding sites [ion binding]"
                     /db_xref="CDD:239074"
     Site            order(243,246,267,270)
                     /site_type="other"
                     /note="zinc cluster 1 [ion binding]"
                     /db_xref="CDD:239074"
     Site            order(244,255,257,263,265)
                     /site_type="active"
                     /note="putative charged binding surface [active]"
                     /db_xref="CDD:239074"
     Site            order(256,271,286,289)
                     /site_type="active"
                     /note="putative hydrophobic binding surface [active]"
                     /db_xref="CDD:239074"
     Site            order(258,261,280,284)
                     /site_type="other"
                     /note="zinc cluster 2 [ion binding]"
                     /db_xref="CDD:239074"
     Region          <434..>528
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     CDS             1..627
                     /gene="DTNB"
                     /coded_by="XM_061154958.1:196..2079"
                     /db_xref="GeneID:133064617"
ORIGIN      
        1 mieesgnkrk tmaekrqlfi emraqnfdvi rlstyrtack lrfvqkrcnl hlvdiwnmie
       61 afrdnglntl dhsteisvsr letvissiyy qlnkrlpsth qisveqsisl llnfmiaayd
      121 segrgkltvf svkamlatmc ggkmldklry vfsqmsdsng lmifskfdqf lkevlklpta
      181 vfegpsfgyt ehsvrtcfpq qkkimlnmfl dtmmadpppq clvwlplmhr lahvenvfhp
      241 vecsycrces mmgfryrcqq chnyqlcqsc fwrghasgph snqhqmkehs swkspakkls
      301 haiskslgcv ptrepphpvf peqpekpldl anivpprppm nmndtmvshm ssgaptptkr
      361 lqysqdipsh ladehalias yvarlqhcar vldspsrlde ehrliaryaa rlaaeagnmt
      421 rpptdlsfnf dankqqrqli aelenknrei lqeiqrlrle heqasqptpe kaqqnptlla
      481 elrllrqrkd eleqrmsalq esrrelmvql eglmkllkee eqkqaaqatg sphtspthgg
      541 srpmpmpvrs tsagstpthc pqdplsgvgg dmqeafaqgt rrnlrndllv aadsitntms
      601 slvkelhsag egaeeeeekm qngkdrg
//
LOCUS       XP_061010942             620 aa            linear   MAM 02-DEC-2023
DEFINITION  dystrobrevin beta isoform X2 [Dama dama].
ACCESSION   XP_061010942
VERSION     XP_061010942.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154959.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..620
                     /product="dystrobrevin beta isoform X2"
                     /calculated_mol_wt=70266
     Region          54..214
                     /region_name="EFh_DTN"
                     /note="EF-hand-like motif found in dystrobrevins and
                     similar proteins; cd16244"
                     /db_xref="CDD:320002"
     Region          54..95
                     /region_name="EF-hand-like motif"
                     /note="EF-hand-like motif [structural motif]"
                     /db_xref="CDD:320002"
     Region          104..138
                     /region_name="EF-hand-like motif"
                     /note="EF-hand-like motif [structural motif]"
                     /db_xref="CDD:320002"
     Region          144..180
                     /region_name="EF-hand-like motif"
                     /note="EF-hand-like motif [structural motif]"
                     /db_xref="CDD:320002"
     Region          191..214
                     /region_name="EF-hand-like motif"
                     /note="EF-hand-like motif [structural motif]"
                     /db_xref="CDD:320002"
     Region          241..289
                     /region_name="ZZ_dystrophin"
                     /note="Zinc finger, ZZ type. Zinc finger present in
                     dystrophin and dystrobrevin. The ZZ motif coordinates two
                     zinc ions and most likely participates in ligand binding
                     or molecular scaffolding. Dystrophin attaches actin
                     filaments to an integral membrane...; cd02334"
                     /db_xref="CDD:239074"
     Site            order(243,246,258,261,267,270,280,284)
                     /site_type="other"
                     /note="Zinc-binding sites [ion binding]"
                     /db_xref="CDD:239074"
     Site            order(243,246,267,270)
                     /site_type="other"
                     /note="zinc cluster 1 [ion binding]"
                     /db_xref="CDD:239074"
     Site            order(244,255,257,263,265)
                     /site_type="active"
                     /note="putative charged binding surface [active]"
                     /db_xref="CDD:239074"
     Site            order(256,271,286,289)
                     /site_type="active"
                     /note="putative hydrophobic binding surface [active]"
                     /db_xref="CDD:239074"
     Site            order(258,261,280,284)
                     /site_type="other"
                     /note="zinc cluster 2 [ion binding]"
                     /db_xref="CDD:239074"
     Region          <434..>521
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     CDS             1..620
                     /gene="DTNB"
                     /coded_by="XM_061154959.1:194..2056"
                     /db_xref="GeneID:133064617"
ORIGIN      
        1 mieesgnkrk tmaekrqlfi emraqnfdvi rlstyrtack lrfvqkrcnl hlvdiwnmie
       61 afrdnglntl dhsteisvsr letvissiyy qlnkrlpsth qisveqsisl llnfmiaayd
      121 segrgkltvf svkamlatmc ggkmldklry vfsqmsdsng lmifskfdqf lkevlklpta
      181 vfegpsfgyt ehsvrtcfpq qkkimlnmfl dtmmadpppq clvwlplmhr lahvenvfhp
      241 vecsycrces mmgfryrcqq chnyqlcqsc fwrghasgph snqhqmkehs swkspakkls
      301 haiskslgcv ptrepphpvf peqpekpldl anivpprppm nmndtmvshm ssgaptptkr
      361 lqysqdipsh ladehalias yvarlqhcar vldspsrlde ehrliaryaa rlaaeagnmt
      421 rpptdlsfnf dankqqrqli aelenknrei lqeiqrlrle heqasqptpe kaqqnptlla
      481 elrllrqrkd eleqrmsalq esrrelmvql eglmkllkaq atgsphtspt hggsrpmpmp
      541 vrstsagstp thcpqdplsg vggdmqeafa qgtrrnlrnd llvaadsitn tmsslvkelh
      601 sagegaeeee ekmqngkdrg
//
LOCUS       XP_061010943             609 aa            linear   MAM 02-DEC-2023
DEFINITION  dystrobrevin beta isoform X3 [Dama dama].
ACCESSION   XP_061010943
VERSION     XP_061010943.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154960.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..609
                     /product="dystrobrevin beta isoform X3"
                     /calculated_mol_wt=69120
     Region          54..214
                     /region_name="EFh_DTN"
                     /note="EF-hand-like motif found in dystrobrevins and
                     similar proteins; cd16244"
                     /db_xref="CDD:320002"
     Region          54..95
                     /region_name="EF-hand-like motif"
                     /note="EF-hand-like motif [structural motif]"
                     /db_xref="CDD:320002"
     Region          104..138
                     /region_name="EF-hand-like motif"
                     /note="EF-hand-like motif [structural motif]"
                     /db_xref="CDD:320002"
     Region          144..180
                     /region_name="EF-hand-like motif"
                     /note="EF-hand-like motif [structural motif]"
                     /db_xref="CDD:320002"
     Region          191..214
                     /region_name="EF-hand-like motif"
                     /note="EF-hand-like motif [structural motif]"
                     /db_xref="CDD:320002"
     Region          241..289
                     /region_name="ZZ_dystrophin"
                     /note="Zinc finger, ZZ type. Zinc finger present in
                     dystrophin and dystrobrevin. The ZZ motif coordinates two
                     zinc ions and most likely participates in ligand binding
                     or molecular scaffolding. Dystrophin attaches actin
                     filaments to an integral membrane...; cd02334"
                     /db_xref="CDD:239074"
     Site            order(243,246,258,261,267,270,280,284)
                     /site_type="other"
                     /note="Zinc-binding sites [ion binding]"
                     /db_xref="CDD:239074"
     Site            order(243,246,267,270)
                     /site_type="other"
                     /note="zinc cluster 1 [ion binding]"
                     /db_xref="CDD:239074"
     Site            order(244,255,257,263,265)
                     /site_type="active"
                     /note="putative charged binding surface [active]"
                     /db_xref="CDD:239074"
     Site            order(256,271,286,289)
                     /site_type="active"
                     /note="putative hydrophobic binding surface [active]"
                     /db_xref="CDD:239074"
     Site            order(258,261,280,284)
                     /site_type="other"
                     /note="zinc cluster 2 [ion binding]"
                     /db_xref="CDD:239074"
     Region          <434..>528
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     CDS             1..609
                     /gene="DTNB"
                     /coded_by="XM_061154960.1:196..2025"
                     /db_xref="GeneID:133064617"
ORIGIN      
        1 mieesgnkrk tmaekrqlfi emraqnfdvi rlstyrtack lrfvqkrcnl hlvdiwnmie
       61 afrdnglntl dhsteisvsr letvissiyy qlnkrlpsth qisveqsisl llnfmiaayd
      121 segrgkltvf svkamlatmc ggkmldklry vfsqmsdsng lmifskfdqf lkevlklpta
      181 vfegpsfgyt ehsvrtcfpq qkkimlnmfl dtmmadpppq clvwlplmhr lahvenvfhp
      241 vecsycrces mmgfryrcqq chnyqlcqsc fwrghasgph snqhqmkehs swkspakkls
      301 haiskslgcv ptrepphpvf peqpekpldl anivpprppm nmndtmvshm ssgaptptkr
      361 lqysqdipsh ladehalias yvarlqhcar vldspsrlde ehrliaryaa rlaaeagnmt
      421 rpptdlsfnf dankqqrqli aelenknrei lqeiqrlrle heqasqptpe kaqqnptlla
      481 elrllrqrkd eleqrmsalq esrrelmvql eglmkllkee eqkqaaqatg sphtspthgg
      541 srpmpmpvrs tsagstpthc pqdplsgvgg dmqeafaqgt rrnlrndllv aadsitntms
      601 slvkelhsg
//
LOCUS       XP_061010944             597 aa            linear   MAM 02-DEC-2023
DEFINITION  dystrobrevin beta isoform X4 [Dama dama].
ACCESSION   XP_061010944
VERSION     XP_061010944.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154961.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..597
                     /product="dystrobrevin beta isoform X4"
                     /calculated_mol_wt=67651
     Region          54..214
                     /region_name="EFh_DTN"
                     /note="EF-hand-like motif found in dystrobrevins and
                     similar proteins; cd16244"
                     /db_xref="CDD:320002"
     Region          54..95
                     /region_name="EF-hand-like motif"
                     /note="EF-hand-like motif [structural motif]"
                     /db_xref="CDD:320002"
     Region          104..138
                     /region_name="EF-hand-like motif"
                     /note="EF-hand-like motif [structural motif]"
                     /db_xref="CDD:320002"
     Region          144..180
                     /region_name="EF-hand-like motif"
                     /note="EF-hand-like motif [structural motif]"
                     /db_xref="CDD:320002"
     Region          191..214
                     /region_name="EF-hand-like motif"
                     /note="EF-hand-like motif [structural motif]"
                     /db_xref="CDD:320002"
     Region          241..289
                     /region_name="ZZ_dystrophin"
                     /note="Zinc finger, ZZ type. Zinc finger present in
                     dystrophin and dystrobrevin. The ZZ motif coordinates two
                     zinc ions and most likely participates in ligand binding
                     or molecular scaffolding. Dystrophin attaches actin
                     filaments to an integral membrane...; cd02334"
                     /db_xref="CDD:239074"
     Site            order(243,246,258,261,267,270,280,284)
                     /site_type="other"
                     /note="Zinc-binding sites [ion binding]"
                     /db_xref="CDD:239074"
     Site            order(243,246,267,270)
                     /site_type="other"
                     /note="zinc cluster 1 [ion binding]"
                     /db_xref="CDD:239074"
     Site            order(244,255,257,263,265)
                     /site_type="active"
                     /note="putative charged binding surface [active]"
                     /db_xref="CDD:239074"
     Site            order(256,271,286,289)
                     /site_type="active"
                     /note="putative hydrophobic binding surface [active]"
                     /db_xref="CDD:239074"
     Site            order(258,261,280,284)
                     /site_type="other"
                     /note="zinc cluster 2 [ion binding]"
                     /db_xref="CDD:239074"
     Region          <404..>498
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     CDS             1..597
                     /gene="DTNB"
                     /coded_by="XM_061154961.1:197..1990"
                     /db_xref="GeneID:133064617"
ORIGIN      
        1 mieesgnkrk tmaekrqlfi emraqnfdvi rlstyrtack lrfvqkrcnl hlvdiwnmie
       61 afrdnglntl dhsteisvsr letvissiyy qlnkrlpsth qisveqsisl llnfmiaayd
      121 segrgkltvf svkamlatmc ggkmldklry vfsqmsdsng lmifskfdqf lkevlklpta
      181 vfegpsfgyt ehsvrtcfpq qkkimlnmfl dtmmadpppq clvwlplmhr lahvenvfhp
      241 vecsycrces mmgfryrcqq chnyqlcqsc fwrghasgph snqhqmkehs swkspakkls
      301 haiskslgcv ptrepphpvf peqpekpldl anivpprppm nmndtmvshm ssgaptptks
      361 vldspsrlde ehrliaryaa rlaaeagnmt rpptdlsfnf dankqqrqli aelenknrei
      421 lqeiqrlrle heqasqptpe kaqqnptlla elrllrqrkd eleqrmsalq esrrelmvql
      481 eglmkllkee eqkqaaqatg sphtspthgg srpmpmpvrs tsagstpthc pqdplsgvgg
      541 dmqeafaqgt rrnlrndllv aadsitntms slvkelhsag egaeeeeekm qngkdrg
//
LOCUS       XP_061010945             590 aa            linear   MAM 02-DEC-2023
DEFINITION  dystrobrevin beta isoform X5 [Dama dama].
ACCESSION   XP_061010945
VERSION     XP_061010945.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154962.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..590
                     /product="dystrobrevin beta isoform X5"
                     /calculated_mol_wt=66808
     Region          54..214
                     /region_name="EFh_DTN"
                     /note="EF-hand-like motif found in dystrobrevins and
                     similar proteins; cd16244"
                     /db_xref="CDD:320002"
     Region          54..95
                     /region_name="EF-hand-like motif"
                     /note="EF-hand-like motif [structural motif]"
                     /db_xref="CDD:320002"
     Region          104..138
                     /region_name="EF-hand-like motif"
                     /note="EF-hand-like motif [structural motif]"
                     /db_xref="CDD:320002"
     Region          144..180
                     /region_name="EF-hand-like motif"
                     /note="EF-hand-like motif [structural motif]"
                     /db_xref="CDD:320002"
     Region          191..214
                     /region_name="EF-hand-like motif"
                     /note="EF-hand-like motif [structural motif]"
                     /db_xref="CDD:320002"
     Region          241..289
                     /region_name="ZZ_dystrophin"
                     /note="Zinc finger, ZZ type. Zinc finger present in
                     dystrophin and dystrobrevin. The ZZ motif coordinates two
                     zinc ions and most likely participates in ligand binding
                     or molecular scaffolding. Dystrophin attaches actin
                     filaments to an integral membrane...; cd02334"
                     /db_xref="CDD:239074"
     Site            order(243,246,258,261,267,270,280,284)
                     /site_type="other"
                     /note="Zinc-binding sites [ion binding]"
                     /db_xref="CDD:239074"
     Site            order(243,246,267,270)
                     /site_type="other"
                     /note="zinc cluster 1 [ion binding]"
                     /db_xref="CDD:239074"
     Site            order(244,255,257,263,265)
                     /site_type="active"
                     /note="putative charged binding surface [active]"
                     /db_xref="CDD:239074"
     Site            order(256,271,286,289)
                     /site_type="active"
                     /note="putative hydrophobic binding surface [active]"
                     /db_xref="CDD:239074"
     Site            order(258,261,280,284)
                     /site_type="other"
                     /note="zinc cluster 2 [ion binding]"
                     /db_xref="CDD:239074"
     Region          <404..>491
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     CDS             1..590
                     /gene="DTNB"
                     /coded_by="XM_061154962.1:195..1967"
                     /db_xref="GeneID:133064617"
ORIGIN      
        1 mieesgnkrk tmaekrqlfi emraqnfdvi rlstyrtack lrfvqkrcnl hlvdiwnmie
       61 afrdnglntl dhsteisvsr letvissiyy qlnkrlpsth qisveqsisl llnfmiaayd
      121 segrgkltvf svkamlatmc ggkmldklry vfsqmsdsng lmifskfdqf lkevlklpta
      181 vfegpsfgyt ehsvrtcfpq qkkimlnmfl dtmmadpppq clvwlplmhr lahvenvfhp
      241 vecsycrces mmgfryrcqq chnyqlcqsc fwrghasgph snqhqmkehs swkspakkls
      301 haiskslgcv ptrepphpvf peqpekpldl anivpprppm nmndtmvshm ssgaptptks
      361 vldspsrlde ehrliaryaa rlaaeagnmt rpptdlsfnf dankqqrqli aelenknrei
      421 lqeiqrlrle heqasqptpe kaqqnptlla elrllrqrkd eleqrmsalq esrrelmvql
      481 eglmkllkaq atgsphtspt hggsrpmpmp vrstsagstp thcpqdplsg vggdmqeafa
      541 qgtrrnlrnd llvaadsitn tmsslvkelh sagegaeeee ekmqngkdrg
//
LOCUS       XP_061010946             480 aa            linear   MAM 02-DEC-2023
DEFINITION  dystrobrevin beta isoform X6 [Dama dama].
ACCESSION   XP_061010946
VERSION     XP_061010946.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154963.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..480
                     /product="dystrobrevin beta isoform X6"
                     /calculated_mol_wt=54099
     Region          4..85
                     /region_name="EF-hand_3"
                     /note="pfam09069"
                     /db_xref="CDD:462669"
     Region          94..142
                     /region_name="ZZ_dystrophin"
                     /note="Zinc finger, ZZ type. Zinc finger present in
                     dystrophin and dystrobrevin. The ZZ motif coordinates two
                     zinc ions and most likely participates in ligand binding
                     or molecular scaffolding. Dystrophin attaches actin
                     filaments to an integral membrane...; cd02334"
                     /db_xref="CDD:239074"
     Site            order(96,99,111,114,120,123,133,137)
                     /site_type="other"
                     /note="Zinc-binding sites [ion binding]"
                     /db_xref="CDD:239074"
     Site            order(96,99,120,123)
                     /site_type="other"
                     /note="zinc cluster 1 [ion binding]"
                     /db_xref="CDD:239074"
     Site            order(97,108,110,116,118)
                     /site_type="active"
                     /note="putative charged binding surface [active]"
                     /db_xref="CDD:239074"
     Site            order(109,124,139,142)
                     /site_type="active"
                     /note="putative hydrophobic binding surface [active]"
                     /db_xref="CDD:239074"
     Site            order(111,114,133,137)
                     /site_type="other"
                     /note="zinc cluster 2 [ion binding]"
                     /db_xref="CDD:239074"
     Region          <287..>381
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     CDS             1..480
                     /gene="DTNB"
                     /coded_by="XM_061154963.1:133..1575"
                     /db_xref="GeneID:133064617"
ORIGIN      
        1 mtdvfsqmsd snglmifskf dqflkevlkl ptavfegpsf gytehsvrtc fpqqkkimln
       61 mfldtmmadp ppqclvwlpl mhrlahvenv fhpvecsycr cesmmgfryr cqqchnyqlc
      121 qscfwrghas gphsnqhqmk ehsswkspak klshaisksl gcvptrepph pvfpeqpekp
      181 ldlanivppr ppmnmndtmv shmssgaptp tkrlqysqdi pshladehal iasyvarlqh
      241 carvldspsr ldeehrliar yaarlaaeag nmtrpptdls fnfdankqqr qliaelenkn
      301 reilqeiqrl rleheqasqp tpekaqqnpt llaelrllrq rkdeleqrms alqesrrelm
      361 vqleglmkll keeeqkqaaq atgsphtspt hggsrpmpmp vrstsagstp thcpqdplsg
      421 vggdmqeafa qgtrrnlrnd llvaadsitn tmsslvkelh sagegaeeee ekmqngkdrg
//
LOCUS       XP_061010947            1449 aa            linear   MAM 02-DEC-2023
DEFINITION  putative Polycomb group protein ASXL2 isoform X1 [Dama dama].
ACCESSION   XP_061010947
VERSION     XP_061010947.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154964.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1449
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1449
                     /product="putative Polycomb group protein ASXL2 isoform
                     X1"
                     /calculated_mol_wt=155634
     Region          11..82
                     /region_name="HARE-HTH"
                     /note="HB1, ASXL, restriction endonuclease HTH domain;
                     pfam05066"
                     /db_xref="CDD:461541"
     Region          265..386
                     /region_name="ASXH"
                     /note="Asx homology domain; pfam13919"
                     /db_xref="CDD:464041"
     Region          1387..1447
                     /region_name="PHD_3"
                     /note="PHD domain of transcriptional enhancer, Asx;
                     pfam13922"
                     /db_xref="CDD:316444"
     CDS             1..1449
                     /gene="ASXL2"
                     /coded_by="XM_061154964.1:75..4424"
                     /db_xref="GeneID:133064620"
ORIGIN      
        1 mrekgrrkkg rtwaeaaktv lekypntpms hkeilqviqr eglkeisgts placlnamlh
       61 tnsrgeegif ykvpgrmgvy tlkkdvpdgv kelsegsees sdgqsdsqss ensssssdgg
      121 snkegkksrw krkvssrlsq pssphsgcps ptipagkvis ssqkhskkal kqalkqqqqk
      181 kqqqqqcrps msissnqhls lktvkassdp vpakpaiweg kqsdgqsssp qnsnssfsss
      241 svkvenhllg lgkksfqrsd rlhtrqmkrt kcaeidvetp dsilvntnlr alinkhtfsv
      301 lpgdcqqrll lllpevdrqv gpdglmklng salnneffts aaqgwkerls egeftpemqv
      361 rirqeiekek kvepwkeqff esyygqssgl sledskklta spndpkvkkt paeqpkstlp
      421 seaspvsvvp vipqleskee vlqmpspvrk eehesqdktq phsteprlsp atntdelssi
      481 ppikcpkdea lmeqkpvasa eqesekenhl ttpsncnkne sqealltals kpkspgvett
      541 vmkptveagp qettmkepps tladhspesl krkssltqee aptswekrpr vtehrqhqqp
      601 fqvspqpfls rgdrfqvrrv pplkipvsri spmpfptsqv sprarfpisi tspnrtgart
      661 ladikakaql vkaqraaaaa aaaaaaaasv ggtipgpgpg ggqgpgegge rrtarggdpd
      721 sdrvsepgks palelagtgs rggtrellpt gpdsqsqset rtagqpqphs gpgaqlqqtp
      781 svppasavgg acagvpspah thallpalgk lsneklnppr atgtvaslsq qqepsngrqe
      841 kappapadpp lmagaspvhf aaagtvepka gssknapnpp asaeisasas vdltssplts
      901 llttatlekl pvhqvsitta ptgsapslst lpatsslktl gtsshmngpi srpsssipan
      961 nplvtqllqg kdvpmeqilp kpltkvemkt vplttkeekr vgalvgtsmt enstreevhe
     1021 rqshpaaqhl gktlqskqlp qvprplqlfs gkdlrdsgid thqyqeglsk atqdqilqtl
     1081 sqrvrrqnil sfvqpsqfsf thsgfqfedi stsqrfmlgf agrrtskpam aghyllnist
     1141 ygrgsesfrr thsvnpedrf clssptealk mgytdcknaa gdsssgkedd tdeestddeq
     1201 esvlvkeelq aaqssgkcda ssgphsretl stsdcaakkn vkaetpvpeq tpfskenylf
     1261 trgqtfdekt lardfiqaaq kqmahavrgk tmrsspelfn stslplpads pthqslllpp
     1321 lqtpklygsp tqigpsyrgm invstssdmd hnsavpgmpd csqvpsnvgd vmsfsvtvta
     1381 ipasqamnag shgqtipvqa fpeensiedt pskcycrlka mimckgcgaf chddcigpsk
     1441 lcvsclvvr
//
LOCUS       XP_061010948            1328 aa            linear   MAM 02-DEC-2023
DEFINITION  putative Polycomb group protein ASXL2 isoform X2 [Dama dama].
ACCESSION   XP_061010948
VERSION     XP_061010948.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154965.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1328
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1328
                     /product="putative Polycomb group protein ASXL2 isoform
                     X2"
                     /calculated_mol_wt=142426
     Region          144..265
                     /region_name="ASXH"
                     /note="Asx homology domain; pfam13919"
                     /db_xref="CDD:464041"
     Region          1266..1326
                     /region_name="PHD_3"
                     /note="PHD domain of transcriptional enhancer, Asx;
                     pfam13922"
                     /db_xref="CDD:316444"
     CDS             1..1328
                     /gene="ASXL2"
                     /coded_by="XM_061154965.1:203..4189"
                     /db_xref="GeneID:133064620"
ORIGIN      
        1 mfreelygip nqvssrlsqp ssphsgcpsp tipagkviss sqkhskkalk qalkqqqqkk
       61 qqqqqcrpsm sissnqhlsl ktvkassdpv pakpaiwegk qsdgqssspq nsnssfssss
      121 vkvenhllgl gkksfqrsdr lhtrqmkrtk caeidvetpd silvntnlra linkhtfsvl
      181 pgdcqqrlll llpevdrqvg pdglmklngs alnnefftsa aqgwkerlse geftpemqvr
      241 irqeiekekk vepwkeqffe syygqssgls ledskkltas pndpkvkktp aeqpkstlps
      301 easpvsvvpv ipqleskeev lqmpspvrke ehesqdktqp hsteprlspa tntdelssip
      361 pikcpkdeal meqkpvasae qesekenhlt tpsncnknes qealltalsk pkspgvettv
      421 mkptveagpq ettmkeppst ladhspeslk rkssltqeea ptswekrprv tehrqhqqpf
      481 qvspqpflsr gdrfqvrrvp plkipvsris pmpfptsqvs prarfpisit spnrtgartl
      541 adikakaqlv kaqraaaaaa aaaaaaasvg gtipgpgpgg gqgpgegger rtarggdpds
      601 drvsepgksp alelagtgsr ggtrellptg pdsqsqsetr tagqpqphsg pgaqlqqtps
      661 vppasavgga cagvpspaht hallpalgkl sneklnppra tgtvaslsqq qepsngrqek
      721 appapadppl magaspvhfa aagtvepkag ssknapnppa saeisasasv dltsspltsl
      781 lttatleklp vhqvsittap tgsapslstl patsslktlg tsshmngpis rpsssipann
      841 plvtqllqgk dvpmeqilpk pltkvemktv plttkeekrv galvgtsmte nstreevher
      901 qshpaaqhlg ktlqskqlpq vprplqlfsg kdlrdsgidt hqyqeglska tqdqilqtls
      961 qrvrrqnils fvqpsqfsft hsgfqfedis tsqrfmlgfa grrtskpama ghyllnisty
     1021 grgsesfrrt hsvnpedrfc lssptealkm gytdcknaag dsssgkeddt deestddeqe
     1081 svlvkeelqa aqssgkcdas sgphsretls tsdcaakknv kaetpvpeqt pfskenylft
     1141 rgqtfdektl ardfiqaaqk qmahavrgkt mrsspelfns tslplpadsp thqslllppl
     1201 qtpklygspt qigpsyrgmi nvstssdmdh nsavpgmpdc sqvpsnvgdv msfsvtvtai
     1261 pasqamnags hgqtipvqaf peensiedtp skcycrlkam imckgcgafc hddcigpskl
     1321 cvsclvvr
//
LOCUS       XP_061010949            1191 aa            linear   MAM 02-DEC-2023
DEFINITION  putative Polycomb group protein ASXL2 isoform X3 [Dama dama].
ACCESSION   XP_061010949
VERSION     XP_061010949.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154966.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1191
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1191
                     /product="putative Polycomb group protein ASXL2 isoform
                     X3"
                     /calculated_mol_wt=127094
     Region          11..82
                     /region_name="HARE-HTH"
                     /note="HB1, ASXL, restriction endonuclease HTH domain;
                     pfam05066"
                     /db_xref="CDD:461541"
     Region          265..386
                     /region_name="ASXH"
                     /note="Asx homology domain; pfam13919"
                     /db_xref="CDD:464041"
     Region          1129..1189
                     /region_name="PHD_3"
                     /note="PHD domain of transcriptional enhancer, Asx;
                     pfam13922"
                     /db_xref="CDD:316444"
     CDS             1..1191
                     /gene="ASXL2"
                     /coded_by="XM_061154966.1:75..3650"
                     /db_xref="GeneID:133064620"
ORIGIN      
        1 mrekgrrkkg rtwaeaaktv lekypntpms hkeilqviqr eglkeisgts placlnamlh
       61 tnsrgeegif ykvpgrmgvy tlkkdvpdgv kelsegsees sdgqsdsqss ensssssdgg
      121 snkegkksrw krkvssrlsq pssphsgcps ptipagkvis ssqkhskkal kqalkqqqqk
      181 kqqqqqcrps msissnqhls lktvkassdp vpakpaiweg kqsdgqsssp qnsnssfsss
      241 svkvenhllg lgkksfqrsd rlhtrqmkrt kcaeidvetp dsilvntnlr alinkhtfsv
      301 lpgdcqqrll lllpevdrqv gpdglmklng salnneffts aaqgwkerls egeftpemqv
      361 rirqeiekek kvepwkeqff esyygqssgl sledskklta spndpkvkkt paeqpkstlp
      421 seaspvsvvp vipqleskee vlqmpspvrk eehesqdktq phsteprlsp atntdelssi
      481 ppikcpkdea lmeqkpvasa eqesekenhl ttpsncnkne sqealltals kpkspgvett
      541 vmkptveagp qettmkepps tladhspesl krkssltqee aptswekrpr vtehrqhqqp
      601 fqvspqpfls rgdrfqvrrv pplkipvsri spmpfptsqv sprarfpisi tspnrtgart
      661 ladikakaql vkaqraaaaa aaaaaaaasv ggtipgpgpg ggqgpgegge rrtarggdpd
      721 sdrvsepgks palelagtgs rggtrellpt gpdsqsqset rtagqpqphs gpgaqlqqtp
      781 svppasavgg acagvpspah thallpalgk lsneklnppr atgtvaslsq qqepsngrqe
      841 kappapadpp lmagaspvhf aaagtvepka gssknapnpp asaeisasas vdltssplts
      901 llttatlekl pvhqvsitta ptgsapslst lpatsslktl gtsshmngpi srpsssipan
      961 nplvtqllqg kdvpmeqilp kpltkvemkt vplttkeekr vgalvgtsmt enstreevhe
     1021 rqshpaaqhl gktlqskqlp qvprplqlfs dspthqslll pplqtpklyg sptqigpsyr
     1081 gminvstssd mdhnsavpgm pdcsqvpsnv gdvmsfsvtv taipasqamn agshgqtipv
     1141 qafpeensie dtpskcycrl kamimckgcg afchddcigp sklcvsclvv r
//
LOCUS       XP_061010950             833 aa            linear   MAM 02-DEC-2023
DEFINITION  kinesin-like protein KIF3C isoform X1 [Dama dama].
ACCESSION   XP_061010950
VERSION     XP_061010950.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154967.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..833
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..833
                     /product="kinesin-like protein KIF3C isoform X1"
                     /calculated_mol_wt=93591
     Region          9..363
                     /region_name="KISc_KIF3"
                     /note="Kinesin motor domain, kinesins II or KIF3_like
                     proteins; cd01371"
                     /db_xref="CDD:276822"
     Site            order(18,97,100,102..105,246)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276822"
     Site            order(316,319,322)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276822"
     Region          <459..>626
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..833
                     /gene="KIF3C"
                     /coded_by="XM_061154967.1:9..2510"
                     /db_xref="GeneID:133064621"
ORIGIN      
        1 masktkasea lkvvarcrpl srkeeaaghe qiltmdvklg qvtlrnpraa lgelpktftf
       61 davydasskq adlydetvrp lvdsvlqgfn gtvfaygqtg tgktytmqgt wvepelrgvi
      121 pnafehifth isrsqnqqyl vrasyleiyq eeirdllske pgkrlelken petgvyikdl
      181 ssfvtknvke iehvmnlgnq travgsthmn evssrshaif vitvecserg sdgqdhirvg
      241 klnlvdlags erqnkagpnt aggtatqstg gggggggggs ggerpkeask inlslsalgn
      301 viaalsgnrs thipyrdskl trllqdslgg naktimvatl gpashsydes lstlrfanra
      361 kniknkprvn edpkdtllre fqeeiarlka qlekkgmlgk rlrrkssrrk kavsapagyp
      421 egpvieawva eeeddnnnnh rppqpileta ldknmenylq eqkerleeek aaiqddrslv
      481 seekqkllee kekmledlrr eqeatellaa kykameskll iggrnimdht neqqkmlelk
      541 rqeiaeqkrr eremqqemml rdeetmelrg tytslqqeve vktkklkkly aklqavkaei
      601 qdqhdeyirv rqdleeaqne qtrelklkyl iienfippee knkimnrlfl dceeeqwkfq
      661 plvpsganss qmkkrptsav gykrpisqya rvamamgshp ryraenimfl eldvsppavf
      721 emefshdqdq dpralhmerl mrldsflerp stskvrksrs cgkesacnag aagdsgsipg
      781 sgrslgerng nplqytclen pmdrgawakt pittsvfqsl ergkrrsrgr anp
//
LOCUS       XP_061010951             792 aa            linear   MAM 02-DEC-2023
DEFINITION  kinesin-like protein KIF3C isoform X2 [Dama dama].
ACCESSION   XP_061010951
VERSION     XP_061010951.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154968.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..792
                     /product="kinesin-like protein KIF3C isoform X2"
                     /calculated_mol_wt=89346
     Region          9..363
                     /region_name="KISc_KIF3"
                     /note="Kinesin motor domain, kinesins II or KIF3_like
                     proteins; cd01371"
                     /db_xref="CDD:276822"
     Site            order(18,97,100,102..105,246)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276822"
     Site            order(316,319,322)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276822"
     Region          <459..>626
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..792
                     /gene="KIF3C"
                     /coded_by="XM_061154968.1:9..2387"
                     /db_xref="GeneID:133064621"
ORIGIN      
        1 masktkasea lkvvarcrpl srkeeaaghe qiltmdvklg qvtlrnpraa lgelpktftf
       61 davydasskq adlydetvrp lvdsvlqgfn gtvfaygqtg tgktytmqgt wvepelrgvi
      121 pnafehifth isrsqnqqyl vrasyleiyq eeirdllske pgkrlelken petgvyikdl
      181 ssfvtknvke iehvmnlgnq travgsthmn evssrshaif vitvecserg sdgqdhirvg
      241 klnlvdlags erqnkagpnt aggtatqstg gggggggggs ggerpkeask inlslsalgn
      301 viaalsgnrs thipyrdskl trllqdslgg naktimvatl gpashsydes lstlrfanra
      361 kniknkprvn edpkdtllre fqeeiarlka qlekkgmlgk rlrrkssrrk kavsapagyp
      421 egpvieawva eeeddnnnnh rppqpileta ldknmenylq eqkerleeek aaiqddrslv
      481 seekqkllee kekmledlrr eqeatellaa kykameskll iggrnimdht neqqkmlelk
      541 rqeiaeqkrr eremqqemml rdeetmelrg tytslqqeve vktkklkkly aklqavkaei
      601 qdqhdeyirv rqdleeaqne qtrelklkyl iienfippee knkimnrlfl dceeeqwkfq
      661 plvpsganss qmkkrptsav gykrpisqya rvamamgshp ryraenimfl eldvsppavf
      721 emefshdqdq dpralhmerl mrldsflerp stskvrksrs wcqspqrppp ptahaslaas
      781 aalrpttvld he
//
LOCUS       XP_061010952             200 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-related protein Rab-10 [Dama dama].
ACCESSION   XP_061010952
VERSION     XP_061010952.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154969.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..200
                     /product="ras-related protein Rab-10"
                     /calculated_mol_wt=22410
     Region          7..173
                     /region_name="Rab8_Rab10_Rab13_like"
                     /note="Rab GTPase families 8, 10, 13 (Rab8, Rab10, Rab13);
                     cd01867"
                     /db_xref="CDD:206659"
     Site            7..11
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206659"
     Site            16..23
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206659"
     Site            order(18..24,34..37,40..41,67,122..123,125..126,153..154)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206659"
     Site            order(24..36,38..40)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206659"
     Site            order(34,39..47)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206659"
     Site            order(37,39,43..50,57,59)
                     /site_type="other"
                     /note="GEF interaction site [polypeptide binding]"
                     /db_xref="CDD:206659"
     Site            41
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206659"
     Site            order(42,44..46,61,63,70..71,74,78,80..83,170)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206659"
     Site            order(42..43,45,63..64,71,73,75..77)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206659"
     Site            42..46
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206659"
     Site            59..63
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206659"
     Site            64..67
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206659"
     Site            order(67,69..79)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206659"
     Site            70..75
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206659"
     Site            78..82
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206659"
     Site            87..92
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206659"
     Site            110..119
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206659"
     Site            122..125
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206659"
     Site            152..154
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206659"
     Site            168..173
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206659"
     CDS             1..200
                     /gene="RAB10"
                     /coded_by="XM_061154969.1:533..1135"
                     /db_xref="GeneID:133064623"
ORIGIN      
        1 makktydllf kllligdsgv gktcvlfrfs ddafnttfis tigidfkikt velqgkkikl
       61 qiwdtagqer fhtittsyyr gamgimlvyd itngksfeni skwlrnideh anedvermll
      121 gnkcdmddkr vvpkgkgeqi arehgirffe tsakaninie kafltlaedi lrktpvkepn
      181 senvdissgg gvtgwkskcc
//
LOCUS       XP_061010953             875 aa            linear   MAM 02-DEC-2023
DEFINITION  GRB2-associated and regulator of MAPK protein 2 [Dama dama].
ACCESSION   XP_061010953
VERSION     XP_061010953.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154970.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..875
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..875
                     /product="GRB2-associated and regulator of MAPK protein 2"
                     /calculated_mol_wt=92558
     Region          29..343
                     /region_name="CABIT"
                     /note="Cell-cycle sustaining, positive selection;
                     pfam12736"
                     /db_xref="CDD:463686"
     Region          <569..811
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          807..873
                     /region_name="SAM_GAREM"
                     /note="SAM domain of GAREM subfamily; cd09525"
                     /db_xref="CDD:188924"
     CDS             1..875
                     /gene="GAREM2"
                     /coded_by="XM_061154970.1:22..2649"
                     /db_xref="GeneID:133064624"
ORIGIN      
        1 meklaaglag lrwsmgafpl dlivsrcrlp tlaclgpgey aegvserdil lihscrqwtt
       61 vtahtleegh yvigpkidip lqypgkfkll eqardvrepv ryfssveeva svfpdrifvm
      121 eaitfsvkvv sgefsedsev ynftlhagde ltlmgqaeil cakttkersr fttllrklgr
      181 agalagvggg gggggpggag aagggggarp ikgkmpclic mnhrtnesls lpfqcqgrfs
      241 trsplelqmq egehtvraii ervrlpvnvl vpsrpprnpy dlhpvreghc yklvsiiskt
      301 vvlglalrre gpaplhflll tntprfalpq gllagdprve rlvrdsasyc rerfdpdeys
      361 tavreapael addcasprra rlclpappra lvparapgpg ppgdgdqeyv ipdwaggpep
      421 aaplaeipye elwthqaaeg laesrtrplp gpdlisfgaa gpprlepeaa pppvppksea
      481 vkeecrllna ppvpprggsg rlsgsppvpp rfpklqpvhs pssslsyyss glqdgagsrs
      541 gsgspspday slycypctwg dckvgesssr pppgplpstt qpsqasrall eplsgraasl
      601 lgadtpakty hgcpppfkps hpqkrfapfg alnpfsgpay ptgpsaasss gpaaasgpla
      661 tsspayspgl sspgqaysaa sasscptsss sssewqepsl epfdpfelgr gsspepellr
      721 cqepravgap glglsplgpp kafdpeslvl rqgpaplspa apqgpeagga rllltqgrle
      781 gppasprdga tawggreaas wqppadlsal sleevsrslr figlsedvvs ffareridgs
      841 ifvqlsedil addfrltklq vkkimqfikg wrpki
//
LOCUS       XP_061010954             397 aa            linear   MAM 02-DEC-2023
DEFINITION  ethanolaminephosphotransferase 1 isoform X1 [Dama dama].
ACCESSION   XP_061010954
VERSION     XP_061010954.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154971.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..397
                     /product="ethanolaminephosphotransferase 1 isoform X1"
                     /calculated_mol_wt=45106
     Region          6..382
                     /region_name="PRK10832"
                     /note="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase; cl00453"
                     /db_xref="CDD:469774"
     CDS             1..397
                     /gene="SELENOI"
                     /coded_by="XM_061154971.1:121..1314"
                     /db_xref="GeneID:133064627"
ORIGIN      
        1 masyeyvspe qlagfdkyky savdtnplsl yvmhpfwntv vkvfptwlap nlitfsgfll
       61 vvfnfllmay fdpdfyasap ghkhvpdwvw ivvgilnfma ytldgvdgkq arrtnsstpl
      121 gelfdhglds wscvyfvvtv ysifgrgssg vsvfvlylll wvvlfsfils hwekyntgil
      181 flpwgydisq vtisfvyivt avvgveawye pflfnflyrd lftamiigca lcvtlpmsll
      241 nffrsyknnt lkynsvyeav vpffspcllf ilstawills psdilelhpr vfylmvgtaf
      301 anstcqlivc qmsstrcptl nwlllplfvi vmvvnvgvtp yverillftl taaftlahvh
      361 ygvqvvkqls nhfhiypfsl rkpnsdulgv eeknigv
//
LOCUS       XP_061010955             258 aa            linear   MAM 02-DEC-2023
DEFINITION  ethanolaminephosphotransferase 1 isoform X2 [Dama dama].
ACCESSION   XP_061010955
VERSION     XP_061010955.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154972.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..258
                     /product="ethanolaminephosphotransferase 1 isoform X2"
                     /calculated_mol_wt=29444
     Region          6..>212
                     /region_name="PRK10832"
                     /note="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase; cl00453"
                     /db_xref="CDD:469774"
     CDS             1..258
                     /gene="SELENOI"
                     /coded_by="XM_061154972.1:145..921"
                     /db_xref="GeneID:133064627"
ORIGIN      
        1 masyeyvspe qlagfdkyky savdtnplsl yvmhpfwntv vkvfptwlap nlitfsgfll
       61 vvfnfllmay fdpdfyasap ghkhvpdwvw ivvgilnfma ytldgvdgkq arrtnsstpl
      121 gelfdhglds wscvyfvvtv ysifgrgssg vsvfvlylll wvvlfsfils hwekyntgil
      181 flpwgydisq vtisfvyivt avvgveawye pflfnflyrd lftamiigca lcvtlpmsll
      241 nffsmdppvt fryfrvtp
//
LOCUS       XP_061010956             234 aa            linear   MAM 02-DEC-2023
DEFINITION  ethanolaminephosphotransferase 1 isoform X3 [Dama dama].
ACCESSION   XP_061010956
VERSION     XP_061010956.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154973.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..234
                     /product="ethanolaminephosphotransferase 1 isoform X3"
                     /calculated_mol_wt=26555
     Region          6..>215
                     /region_name="PRK10832"
                     /note="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase; cl00453"
                     /db_xref="CDD:469774"
     CDS             1..234
                     /gene="SELENOI"
                     /coded_by="XM_061154973.1:183..887"
                     /db_xref="GeneID:133064627"
ORIGIN      
        1 masyeyvspe qlagfdkyky savdtnplsl yvmhpfwntv vkvfptwlap nlitfsgfll
       61 vvfnfllmay fdpdfyasap ghkhvpdwvw ivvgilnfma ytldgvdgkq arrtnsstpl
      121 gelfdhglds wscvyfvvtv ysifgrgssg vsvfvlylll wvvlfsfils hwekyntgil
      181 flpwgydisq vtisfvyivt avvgveawlc tvrdssnefv kffqhgssch lqif
//
LOCUS       XP_061010957             226 aa            linear   MAM 02-DEC-2023
DEFINITION  ethanolaminephosphotransferase 1 isoform X4 [Dama dama].
ACCESSION   XP_061010957
VERSION     XP_061010957.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154974.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..226
                     /product="ethanolaminephosphotransferase 1 isoform X4"
                     /calculated_mol_wt=25686
     Region          6..>215
                     /region_name="PRK10832"
                     /note="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase; cl00453"
                     /db_xref="CDD:469774"
     CDS             1..226
                     /gene="SELENOI"
                     /coded_by="XM_061154974.1:179..859"
                     /db_xref="GeneID:133064627"
ORIGIN      
        1 masyeyvspe qlagfdkyky savdtnplsl yvmhpfwntv vkvfptwlap nlitfsgfll
       61 vvfnfllmay fdpdfyasap ghkhvpdwvw ivvgilnfma ytldgvdgkq arrtnsstpl
      121 gelfdhglds wscvyfvvtv ysifgrgssg vsvfvlylll wvvlfsfils hwekyntgil
      181 flpwgydisq vtisfvyivt avvgveawlc tvrdssnefv kffqkl
//
LOCUS       XP_061010958            1998 aa            linear   MAM 02-DEC-2023
DEFINITION  otoferlin isoform X1 [Dama dama].
ACCESSION   XP_061010958
VERSION     XP_061010958.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154975.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1998
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1998
                     /product="otoferlin isoform X1"
                     /calculated_mol_wt=226931
     Region          3..129
                     /region_name="C2A_Ferlin"
                     /note="C2 domain first repeat in Ferlin; cd08373"
                     /db_xref="CDD:176019"
     Region          251..362
                     /region_name="C2B_Ferlin"
                     /note="C2 domain second repeat in Ferlin; cd04011"
                     /db_xref="CDD:175978"
     Region          360..410
                     /region_name="FerI"
                     /note="FerI (NUC094) domain; pfam08151"
                     /db_xref="CDD:462377"
     Region          418..567
                     /region_name="C2C_Ferlin"
                     /note="C2 domain third repeat in Ferlin; cd04018"
                     /db_xref="CDD:175985"
     Site            order(447,453,501,503,514,516)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175985"
     Region          842..917
                     /region_name="FerB"
                     /note="FerB (NUC096) domain; pfam08150"
                     /db_xref="CDD:462376"
     Region          960..1097
                     /region_name="C2D_Ferlin"
                     /note="C2 domain fourth repeat in Ferlin; cd04017"
                     /db_xref="CDD:175984"
     Site            order(976,982,1038,1040)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175984"
     Region          1494..1617
                     /region_name="C2E_Ferlin"
                     /note="C2 domain fifth repeat in Ferlin; cd04037"
                     /db_xref="CDD:176002"
     Site            order(1509,1515,1564,1566,1571)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176002"
     Region          1734..1867
                     /region_name="C2F_Ferlin"
                     /note="C2 domain sixth repeat in Ferlin; cd08374"
                     /db_xref="CDD:176020"
     Region          1877..1995
                     /region_name="Ferlin_C"
                     /note="Ferlin C-terminus; pfam16165"
                     /db_xref="CDD:435183"
     CDS             1..1998
                     /gene="OTOF"
                     /coded_by="XM_061154975.1:1..5997"
                     /db_xref="GeneID:133064629"
ORIGIN      
        1 malfvhlktv selrgkgdri akvtfrgqsf ysrvlesced vadfdetfrw pvassidsne
       61 mleiqifnys kvfsnkligt frmvlqkvve enhvevtdtl mddnnaiikt slcvevryqa
      121 tdgtvgswdn gdflgeeslh eeekdsqetd gllpgsrpss rppgeksfrr agrsvfsamk
      181 lgknrphkee pqrqdepavl emedldrlai rlgdgldpds vslasvtalt tnvsnkrskp
      241 dikmepsagr pmdyqvsitv iearqlvgln mdpvvcvevg ddkkytsmke stncpyyney
      301 fvfdfhvspd vmfdkiikis vihsknllrs gtlvgsfkmd vgtvysqpeh qfhhkwavls
      361 dpddisaglk gyvkcdvavv gkgdniktph kanetdeddi egnlllpegv pperqwarfy
      421 vkiyraeglp rmntslmanv kkafigenkd lvdpyvqvff agqkgktsvq kssyeplwne
      481 qvvftdlfpp lckrmkvqir dsdkvndvai gthfidlrki sndgdkgflp tlgpawvnmy
      541 gstrnytlld ehqdlneglg egvsfrarlm lglaveildt snpeitsste vqveqatpis
      601 esctgkieef flfgafleas midrkngdkp itfevtigny gnevdglsrp qrprprkepg
      661 deeevdliqn lsddetdegg dlasvsstpp mrpqitdrny fhlpylerkp ciyikswwpd
      721 qrrrlynani mdhiadklee glndvqemik teksyperrl rgvleelssg cyrflsladk
      781 dqshssrtrl drerlkscmr elesmgqqak ilraqvkrht vrdklrlcqn flqklrflad
      841 epqhsipdvf iwmmsnnkri aytrvpskdl lfsiveeelg kdcakvktlf lklpgkrgfg
      901 sagwtvqakl elylwlglsk qrkdflcglp cgfeevkaaq glglhsfppi slvytkkqaf
      961 qlrahmyqar slfaadstgl sdpfarvffi nqsqctevln etlcptwdqm lvfdnlelyg
     1021 eahelrddpp iivieiydqd tmgkadfmgr tfakplvkma deaycpprfp pqleyyqiyr
     1081 gnatagdlla afellqigpa gkadlpping pmdvdrgpim pvpvgirpvl skyrvevlfw
     1141 glrdlkrvnl aqvdrprvdi ecagkgvqss lihnykknpn fstlvkwfev dlpenellhp
     1201 plnirvvdcr afgrytlvgs havsslrrfi yrppdrsapn wntsgrllqg rrvlysggps
     1261 srptgevvvs mepevpvkkl etmvkldats davikvdvad eekerkkkkk kgsadepeee
     1321 epdesmldww skyfasidtm keqirqqeis gidleekeem dnteglkgpm kgkekaraak
     1381 eekkkrtqnl gpgqgsevpe krkpkvdelk vypkelesef dsfedwlhtf nllrgktgdd
     1441 edsgteeeri vgrfkgslcv ykvplpedvs reagydptyg mfqgipsndp invlvrvyvv
     1501 ratdlhpadi ngkadpyiai rlgktdirdk enyiskqlnp vfgksfdiea cfpmeslltv
     1561 avydwdlvgt ddligetkid lenrfyskhr atcgiaqtys vhgyniwrdp mkpsqiltrl
     1621 ckegkvdgph fgppgrvkvs nrvftgpsei edengqrkpt eehvallalr hwediprvgc
     1681 rlvpehvetr pllnpdkpgi eqgrlelwvd mfpmdmpapg tpldisprkp kkyelrvivw
     1741 ntdevvledd dfftgekssd ifvrgwlkgq qedkqdtdvh yhsltgegnf nwrylfpfdy
     1801 laaeekivis kkesmfswde teykiparlt lqiwdadhfs addflgaiel dlnrfprgak
     1861 takqctmema tgevdvplvs ifkqkrvkgw wpllarnend efeltgkvea elhlltaeea
     1921 eknpvglarn epdplekpnr pdtafvwfln plksikylic trykwliiki vlallgllml
     1981 alflyslpgy mvkkllga
//
LOCUS       XP_061010959            1993 aa            linear   MAM 02-DEC-2023
DEFINITION  otoferlin isoform X2 [Dama dama].
ACCESSION   XP_061010959
VERSION     XP_061010959.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154976.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1993
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1993
                     /product="otoferlin isoform X2"
                     /calculated_mol_wt=226387
     Region          3..129
                     /region_name="C2A_Ferlin"
                     /note="C2 domain first repeat in Ferlin; cd08373"
                     /db_xref="CDD:176019"
     Region          266..377
                     /region_name="C2B_Ferlin"
                     /note="C2 domain second repeat in Ferlin; cd04011"
                     /db_xref="CDD:175978"
     Region          375..425
                     /region_name="FerI"
                     /note="FerI (NUC094) domain; pfam08151"
                     /db_xref="CDD:462377"
     Region          433..582
                     /region_name="C2C_Ferlin"
                     /note="C2 domain third repeat in Ferlin; cd04018"
                     /db_xref="CDD:175985"
     Site            order(462,468,516,518,529,531)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175985"
     Region          857..932
                     /region_name="FerB"
                     /note="FerB (NUC096) domain; pfam08150"
                     /db_xref="CDD:462376"
     Region          975..1112
                     /region_name="C2D_Ferlin"
                     /note="C2 domain fourth repeat in Ferlin; cd04017"
                     /db_xref="CDD:175984"
     Site            order(991,997,1053,1055)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175984"
     Region          1489..1612
                     /region_name="C2E_Ferlin"
                     /note="C2 domain fifth repeat in Ferlin; cd04037"
                     /db_xref="CDD:176002"
     Site            order(1504,1510,1559,1561,1566)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176002"
     Region          1729..1862
                     /region_name="C2F_Ferlin"
                     /note="C2 domain sixth repeat in Ferlin; cd08374"
                     /db_xref="CDD:176020"
     Region          1872..1990
                     /region_name="Ferlin_C"
                     /note="Ferlin C-terminus; pfam16165"
                     /db_xref="CDD:435183"
     CDS             1..1993
                     /gene="OTOF"
                     /coded_by="XM_061154976.1:1..5982"
                     /db_xref="GeneID:133064629"
ORIGIN      
        1 malfvhlktv selrgkgdri akvtfrgqsf ysrvlesced vadfdetfrw pvassidsne
       61 mleiqifnys kvfsnkligt frmvlqkvve enhvevtdtl mddnnaiikt slcvevryqa
      121 tdgtvgswdn gdflgeeslh eeekdsqetd gllpgsrpss rppgeksfrs kgrektkggr
      181 dgehkagrsv fsamklgknr phkeepqrqd epavlemedl drlairlgdg ldpdsvslas
      241 vtalttnvsn krskpdikme psagrpmdyq vsitviearq lvglnmdpvv cvevgddkky
      301 tsmkestncp yyneyfvfdf hvspdvmfdk iikisvihsk nllrsgtlvg sfkmdvgtvy
      361 sqpehqfhhk wavlsdpddi saglkgyvkc dvavvgkgdn iktphkanet deddiegnll
      421 lpegvpperq warfyvkiyr aeglprmnts lmanvkkafi genkdlvdpy vqvffagqkg
      481 ktsvqkssye plwneqvvft dlfpplckrm kvqirdsdkv ndvaigthfi dlrkisndgd
      541 kgflptlgpa wvnmygstrn ytlldehqdl neglgegvsf rarlmlglav eildtsnpei
      601 tsstevqveq atpisesctg kieefflfga fleasmidrk ngdkpitfev tignygnevd
      661 glsrpqrprp rkepgdeeev dliqnlsdde tdeggdlasv sstppmrpqi tdrnyfhlpy
      721 lerkpciyik swwpdqrrrl ynanimdhia dkleeglndv qemikteksy perrlrgvle
      781 elssgcyrfl sladkdqshs srtrldrerl kscmrelesm gqqakilraq vkrhtvrdkl
      841 rlcqnflqkl rfladepqhs ipdvfiwmms nnkriaytrv pskdllfsiv eeelgkdcak
      901 vktlflklpg krgfgsagwt vqaklelylw lglskqrkdf lcglpcgfee vkaaqglglh
      961 sfppislvyt kkqafqlrah myqarslfaa dstglsdpfa rvffinqsqc tevlnetlcp
     1021 twdqmlvfdn lelygeahel rddppiivie iydqdtmgka dfmgrtfakp lvkmadeayc
     1081 pprfppqley yqiyrgnata gdllaafell qigpagkadl ppingpmdvd rgpimpvpvg
     1141 irpvlskyrv evlfwglrdl krvnlaqvdr prvdiecagk gvqsslihny kknpnfstlv
     1201 kwfevdlpen ellhpplnir vvdcrafgry tlvgshavss lrrfiyrppd rsapnwntsg
     1261 evvvsmepev pvkkletmvk ldatsdavik vdvadeeker kkkkkkgsad epeeeepdes
     1321 mldwwskyfa sidtmkeqir qqeisgidle ekeemdnteg lkgpmkgkek araakeekkk
     1381 rtqnlgpgqg sevpekrkpk vdelkvypke lesefdsfed wlhtfnllrg ktgddedsgt
     1441 eeerivgrfk gslcvykvpl pedvsreagy dptygmfqgi psndpinvlv rvyvvratdl
     1501 hpadingkad pyiairlgkt dirdkenyis kqlnpvfgks fdieacfpme slltvavydw
     1561 dlvgtddlig etkidlenrf yskhratcgi aqtysvhgyn iwrdpmkpsq iltrlckegk
     1621 vdgphfgppg rvkvsnrvft gpseiedeng qrkpteehva llalrhwedi prvgcrlvpe
     1681 hvetrpllnp dkpgieqgrl elwvdmfpmd mpapgtpldi sprkpkkyel rvivwntdev
     1741 vledddfftg ekssdifvrg wlkgqqedkq dtdvhyhslt gegnfnwryl fpfdylaaee
     1801 kiviskkesm fswdeteyki parltlqiwd adhfsaddfl gaieldlnrf prgaktakqc
     1861 tmematgevd vplvsifkqk rvkgwwplla rnendefelt gkveaelhll taeeaeknpv
     1921 glarnepdpl ekpnrpdtaf vwflnplksi kylictrykw liikivlall gllmlalfly
     1981 slpgymvkkl lga
//
LOCUS       XP_061010960            1978 aa            linear   MAM 02-DEC-2023
DEFINITION  otoferlin isoform X3 [Dama dama].
ACCESSION   XP_061010960
VERSION     XP_061010960.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154977.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1978
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1978
                     /product="otoferlin isoform X3"
                     /calculated_mol_wt=224791
     Region          3..129
                     /region_name="C2A_Ferlin"
                     /note="C2 domain first repeat in Ferlin; cd08373"
                     /db_xref="CDD:176019"
     Region          251..362
                     /region_name="C2B_Ferlin"
                     /note="C2 domain second repeat in Ferlin; cd04011"
                     /db_xref="CDD:175978"
     Region          360..410
                     /region_name="FerI"
                     /note="FerI (NUC094) domain; pfam08151"
                     /db_xref="CDD:462377"
     Region          418..567
                     /region_name="C2C_Ferlin"
                     /note="C2 domain third repeat in Ferlin; cd04018"
                     /db_xref="CDD:175985"
     Site            order(447,453,501,503,514,516)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175985"
     Region          842..917
                     /region_name="FerB"
                     /note="FerB (NUC096) domain; pfam08150"
                     /db_xref="CDD:462376"
     Region          960..1097
                     /region_name="C2D_Ferlin"
                     /note="C2 domain fourth repeat in Ferlin; cd04017"
                     /db_xref="CDD:175984"
     Site            order(976,982,1038,1040)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175984"
     Region          1474..1597
                     /region_name="C2E_Ferlin"
                     /note="C2 domain fifth repeat in Ferlin; cd04037"
                     /db_xref="CDD:176002"
     Site            order(1489,1495,1544,1546,1551)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176002"
     Region          1714..1847
                     /region_name="C2F_Ferlin"
                     /note="C2 domain sixth repeat in Ferlin; cd08374"
                     /db_xref="CDD:176020"
     Region          1857..1975
                     /region_name="Ferlin_C"
                     /note="Ferlin C-terminus; pfam16165"
                     /db_xref="CDD:435183"
     CDS             1..1978
                     /gene="OTOF"
                     /coded_by="XM_061154977.1:1..5937"
                     /db_xref="GeneID:133064629"
ORIGIN      
        1 malfvhlktv selrgkgdri akvtfrgqsf ysrvlesced vadfdetfrw pvassidsne
       61 mleiqifnys kvfsnkligt frmvlqkvve enhvevtdtl mddnnaiikt slcvevryqa
      121 tdgtvgswdn gdflgeeslh eeekdsqetd gllpgsrpss rppgeksfrr agrsvfsamk
      181 lgknrphkee pqrqdepavl emedldrlai rlgdgldpds vslasvtalt tnvsnkrskp
      241 dikmepsagr pmdyqvsitv iearqlvgln mdpvvcvevg ddkkytsmke stncpyyney
      301 fvfdfhvspd vmfdkiikis vihsknllrs gtlvgsfkmd vgtvysqpeh qfhhkwavls
      361 dpddisaglk gyvkcdvavv gkgdniktph kanetdeddi egnlllpegv pperqwarfy
      421 vkiyraeglp rmntslmanv kkafigenkd lvdpyvqvff agqkgktsvq kssyeplwne
      481 qvvftdlfpp lckrmkvqir dsdkvndvai gthfidlrki sndgdkgflp tlgpawvnmy
      541 gstrnytlld ehqdlneglg egvsfrarlm lglaveildt snpeitsste vqveqatpis
      601 esctgkieef flfgafleas midrkngdkp itfevtigny gnevdglsrp qrprprkepg
      661 deeevdliqn lsddetdegg dlasvsstpp mrpqitdrny fhlpylerkp ciyikswwpd
      721 qrrrlynani mdhiadklee glndvqemik teksyperrl rgvleelssg cyrflsladk
      781 dqshssrtrl drerlkscmr elesmgqqak ilraqvkrht vrdklrlcqn flqklrflad
      841 epqhsipdvf iwmmsnnkri aytrvpskdl lfsiveeelg kdcakvktlf lklpgkrgfg
      901 sagwtvqakl elylwlglsk qrkdflcglp cgfeevkaaq glglhsfppi slvytkkqaf
      961 qlrahmyqar slfaadstgl sdpfarvffi nqsqctevln etlcptwdqm lvfdnlelyg
     1021 eahelrddpp iivieiydqd tmgkadfmgr tfakplvkma deaycpprfp pqleyyqiyr
     1081 gnatagdlla afellqigpa gkadlpping pmdvdrgpim pvpvgirpvl skyrvevlfw
     1141 glrdlkrvnl aqvdrprvdi ecagkgvqss lihnykknpn fstlvkwfev dlpenellhp
     1201 plnirvvdcr afgrytlvgs havsslrrfi yrppdrsapn wntsgevvvs mepevpvkkl
     1261 etmvkldats davikvdvad eekerkkkkk kgsadepeee epdesmldww skyfasidtm
     1321 keqirqqeis gidleekeem dnteglkgpm kgkekaraak eekkkrtqnl gpgqgsevpe
     1381 krkpkvdelk vypkelesef dsfedwlhtf nllrgktgdd edsgteeeri vgrfkgslcv
     1441 ykvplpedvs reagydptyg mfqgipsndp invlvrvyvv ratdlhpadi ngkadpyiai
     1501 rlgktdirdk enyiskqlnp vfgksfdiea cfpmeslltv avydwdlvgt ddligetkid
     1561 lenrfyskhr atcgiaqtys vhgyniwrdp mkpsqiltrl ckegkvdgph fgppgrvkvs
     1621 nrvftgpsei edengqrkpt eehvallalr hwediprvgc rlvpehvetr pllnpdkpgi
     1681 eqgrlelwvd mfpmdmpapg tpldisprkp kkyelrvivw ntdevvledd dfftgekssd
     1741 ifvrgwlkgq qedkqdtdvh yhsltgegnf nwrylfpfdy laaeekivis kkesmfswde
     1801 teykiparlt lqiwdadhfs addflgaiel dlnrfprgak takqctmema tgevdvplvs
     1861 ifkqkrvkgw wpllarnend efeltgkvea elhlltaeea eknpvglarn epdplekpnr
     1921 pdtafvwfln plksikylic trykwliiki vlallgllml alflyslpgy mvkkllga
//
LOCUS       XP_061010961             996 aa            linear   MAM 02-DEC-2023
DEFINITION  adhesion G-protein coupled receptor F3 [Dama dama].
ACCESSION   XP_061010961
VERSION     XP_061010961.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154978.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..996
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..996
                     /product="adhesion G-protein coupled receptor F3"
                     /calculated_mol_wt=106455
     Region          643..688
                     /region_name="GPS"
                     /note="GPCR proteolysis site, GPS, motif; pfam01825"
                     /db_xref="CDD:460350"
     Region          698..966
                     /region_name="7tmB2_GPR113"
                     /note="orphan adhesion receptor GPR113, member of the
                     class B2 family of seven-transmembrane G protein-coupled
                     receptors; cd15253"
                     /db_xref="CDD:320381"
     Region          699..724
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320381"
     Site            order(704,708,756,759..760,763,772,779,855..856,858,860,
                     916,919,932,936)
                     /site_type="other"
                     /note="putative polypeptide ligand binding pocket
                     [polypeptide binding]"
                     /db_xref="CDD:320381"
     Region          739..761
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320381"
     Region          772..799
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320381"
     Region          813..833
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320381"
     Region          852..881
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320381"
     Region          897..924
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320381"
     Region          929..954
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320381"
     CDS             1..996
                     /gene="ADGRF3"
                     /coded_by="XM_061154978.1:52..3042"
                     /db_xref="GeneID:133064630"
ORIGIN      
        1 mvcsaapvll lamtlplvep paarasqpgq sqarggsgpq ldpesgagel vlvsvyvqld
       61 fsdapwpaal sqpltvpaas vssapvtlag lnlttecnvt hdgcsycacl sgyqwnasic
      121 nhhqpchtpi khqpcgclvl spteagycql lppgeegscl lppavpatls ldsrlqmpgd
      181 tlnltlltnr ettnlnwflw ptgspspvll ragtcvslts srgrtvlsiv nishrwagey
      241 icrfeaqgft welhqvvrvp lqatdvtglp dqlsvscats pgfqlsccip sahlgytasw
      301 spreggqasv fntpdsqcfm lavehcpvan ttytcelqsp glsplrvavs vtiiqdgdtt
      361 cpedsstvaw nvtkaghvvq aqcpgnrtgt vkrpcgpdgv wgpihssctd tgllalllra
      421 qllqagqgwp eedvsqilaq lqeqvvavts psdllalvgt mtvlakvvad tgtqlscsal
      481 eavlkttdkv lgmnssslwt paqrqmpsvs sslllavetl arslcpqdqp fsfvlpnvql
      541 qsqlleptfp anyrasfptq pplrawiprh slvplrhngt nvsitslvlq kldhllpsny
      601 rqglggslya tpglvlaisi maggqvfkqv evtmdfgdtd gsphcvfwdh dlfqgkggws
      661 dagcqvqaas aspttqcicg hltafsilms ghtvpnqptl ellsqvglga silallmclg
      721 vyrlvwrfvv rnkvaylrhs allnmvlcll aantcflgap llppgprspl claaaflchf
      781 lylatffwml aqalllahql lfvfhqlskl rvlslmvllg ylcpmglagi tlglylpqgr
      841 ylregacwld kkggalytfv gpvlaivgvn glvltmavlk mlrpslsegp qvekrqallg
      901 vikallvltp ifgltwglgl atllqevslv phylftvlna sqgvfillfg clmdkkvqea
      961 lrkrfcgsqp prstnslatn etyisehskg rsedar
//
LOCUS       XP_061010962             763 aa            linear   MAM 02-DEC-2023
DEFINITION  trifunctional enzyme subunit alpha, mitochondrial [Dama dama].
ACCESSION   XP_061010962
VERSION     XP_061010962.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154979.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..763
                     /product="trifunctional enzyme subunit alpha,
                     mitochondrial"
                     /calculated_mol_wt=83286
     Region          27..762
                     /region_name="fa_ox_alpha_mit"
                     /note="fatty acid oxidation complex, alpha subunit,
                     mitochondrial; TIGR02441"
                     /db_xref="CDD:131494"
     CDS             1..763
                     /gene="HADHA"
                     /coded_by="XM_061154979.1:104..2395"
                     /db_xref="GeneID:133064631"
ORIGIN      
        1 mvasraigsl rrftasrtlr csgyicrsft rssvlltrth inygvkgdva virinspnsk
       61 vntlsqelhs efmevmnevw sssqirsavl istkpgcfia gadlnmlnac ttsqevtqis
      121 qeaqkmfekl ekstkpvvaa ingsclgggl elaiscqyri atkdkktvlg spevllgilp
      181 gagatqrlpk mvgipaafdm mltgrgirad rakkmglvdq lveplgpgvk ppeertieyl
      241 eevaitfakg ladkkitpkr dkglveklts yalsipfvrq qiykkveekv rkqtkglypa
      301 plkiidvvkt gieqgsnagy lsesqkfgel amtkeskalm glyrgqtqck knkfgapqke
      361 vkqlavlgag lmgagiaqvs vdkglqtilk dttlpalgrg qqqvfkglnd kvkkktltsf
      421 erdtmfsnli gqldyrgfek admvieavfe dlnlkhrvlk eveavipdhc vfasntsalp
      481 igeiatvskr pekvigmhyf spvdkmqlle iittektskd ttasavdvgl rqgkviivvk
      541 dgpgfyttrc ltpmmsevir ilqegvgpkk ldslttsfgf pvgaatlvde vgvdvakhva
      601 enlskdfger faggslemlr qmiskgflgr ksgkgfyiyq egvknknlns dmdsilaslk
      661 mpsqpdvssd ediqyrlvtr fvneavlclq egvlatpteg digavfglgf ppclggpfhf
      721 vdlygaqkiv drlrkyeaay gkqftpcqll vdhannpnkk fyq
//
LOCUS       XP_061010963             485 aa            linear   MAM 02-DEC-2023
DEFINITION  trifunctional enzyme subunit beta, mitochondrial isoform X1 [Dama
            dama].
ACCESSION   XP_061010963
VERSION     XP_061010963.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154980.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..485
                     /product="trifunctional enzyme subunit beta, mitochondrial
                     isoform X1"
                     /calculated_mol_wt=52291
     Region          62..470
                     /region_name="thiolase"
                     /note="Thiolase are ubiquitous enzymes that catalyze the
                     reversible thiolytic cleavage of 3-ketoacyl-CoA into
                     acyl-CoA and acetyl-CoA, a 2-step reaction involving a
                     covalent intermediate formed with a catalytic cysteine.
                     They are found in prokaryotes and...; cd00751"
                     /db_xref="CDD:238383"
     Site            order(80,107,121,124,128,139..142,150,157..158,161,176,
                     347,349,351,372,468..469)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238383"
     Site            order(145,435,465)
                     /site_type="active"
                     /db_xref="CDD:238383"
     CDS             1..485
                     /gene="HADHB"
                     /coded_by="XM_061154980.1:56..1513"
                     /db_xref="GeneID:133064632"
ORIGIN      
        1 mnqnfkmtsl ltytlknlps tskwalrfcv rplssssqlq aaaasqtksk ktlakpnirn
       61 ivvvdgvrip fllsgtsykd lmphdlaraa lsgllhrtsv pkdvvdyiif gtviqevkts
      121 nvareaalga gfsdktpaht vtmacissnq amttavglia sgqcdvvvag gvelmsdvpi
      181 rhsrkmrkmm ldlnkaktla qrlsviskfr lnflspelpa vsefstsetm ghsadrlaaa
      241 faisreeqde yalrshslak raqdegllsd ivpfkvpgrd tvtqdngirp ssldqmaklk
      301 pafikpygtv taanssfltd gasavlimae ekalamgykp kaylrdfmyv sqdpkdqlll
      361 gptyatpkvl ekagltmndi dafefheafs gqilanlkam dsdwfaqnym grkakvgspp
      421 lekfnnwggs lslghpfgat gcrlvmaaan rlrkeggqyg lvaacaaggq vghrsligas
      481 rklfs
//
LOCUS       XP_061010964             481 aa            linear   MAM 02-DEC-2023
DEFINITION  trifunctional enzyme subunit beta, mitochondrial isoform X2 [Dama
            dama].
ACCESSION   XP_061010964
VERSION     XP_061010964.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154981.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..481
                     /product="trifunctional enzyme subunit beta, mitochondrial
                     isoform X2"
                     /calculated_mol_wt=51878
     Region          62..478
                     /region_name="thiolase"
                     /note="Thiolase are ubiquitous enzymes that catalyze the
                     reversible thiolytic cleavage of 3-ketoacyl-CoA into
                     acyl-CoA and acetyl-CoA, a 2-step reaction involving a
                     covalent intermediate formed with a catalytic cysteine.
                     They are found in prokaryotes and...; cd00751"
                     /db_xref="CDD:238383"
     Site            order(80,107,121,124,128,139..142,150,157..158,161,176,
                     347,349,351,372,468..469)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238383"
     Site            order(145,435,465)
                     /site_type="active"
                     /db_xref="CDD:238383"
     CDS             1..481
                     /gene="HADHB"
                     /coded_by="XM_061154981.1:56..1501"
                     /db_xref="GeneID:133064632"
ORIGIN      
        1 mnqnfkmtsl ltytlknlps tskwalrfcv rplssssqlq aaaasqtksk ktlakpnirn
       61 ivvvdgvrip fllsgtsykd lmphdlaraa lsgllhrtsv pkdvvdyiif gtviqevkts
      121 nvareaalga gfsdktpaht vtmacissnq amttavglia sgqcdvvvag gvelmsdvpi
      181 rhsrkmrkmm ldlnkaktla qrlsviskfr lnflspelpa vsefstsetm ghsadrlaaa
      241 faisreeqde yalrshslak raqdegllsd ivpfkvpgrd tvtqdngirp ssldqmaklk
      301 pafikpygtv taanssfltd gasavlimae ekalamgykp kaylrdfmyv sqdpkdqlll
      361 gptyatpkvl ekagltmndi dafefheafs gqilanlkam dsdwfaqnym grkakvgspp
      421 lekfnnwggs lslghpfgat gcrlvmaaan rlrkeggqyg lvaacaaggq ghamiveayp
      481 k
//
LOCUS       XP_061010965             479 aa            linear   MAM 02-DEC-2023
DEFINITION  trifunctional enzyme subunit beta, mitochondrial isoform X3 [Dama
            dama].
ACCESSION   XP_061010965
VERSION     XP_061010965.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154982.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..479
                     /product="trifunctional enzyme subunit beta, mitochondrial
                     isoform X3"
                     /calculated_mol_wt=51528
     Region          56..464
                     /region_name="thiolase"
                     /note="Thiolase are ubiquitous enzymes that catalyze the
                     reversible thiolytic cleavage of 3-ketoacyl-CoA into
                     acyl-CoA and acetyl-CoA, a 2-step reaction involving a
                     covalent intermediate formed with a catalytic cysteine.
                     They are found in prokaryotes and...; cd00751"
                     /db_xref="CDD:238383"
     Site            order(74,101,115,118,122,133..136,144,151..152,155,170,
                     341,343,345,366,462..463)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238383"
     Site            order(139,429,459)
                     /site_type="active"
                     /db_xref="CDD:238383"
     CDS             1..479
                     /gene="HADHB"
                     /coded_by="XM_061154982.1:160..1599"
                     /db_xref="GeneID:133064632"
ORIGIN      
        1 mtslltytlk nlpstskwal rfcvrplsss sqlqaaaasq tkskktlakp nirnivvvdg
       61 vripfllsgt sykdlmphdl araalsgllh rtsvpkdvvd yiifgtviqe vktsnvarea
      121 algagfsdkt pahtvtmaci ssnqamttav gliasgqcdv vvaggvelms dvpirhsrkm
      181 rkmmldlnka ktlaqrlsvi skfrlnflsp elpavsefst setmghsadr laaafaisre
      241 eqdeyalrsh slakraqdeg llsdivpfkv pgrdtvtqdn girpssldqm aklkpafikp
      301 ygtvtaanss fltdgasavl imaeekalam gykpkaylrd fmyvsqdpkd qlllgptyat
      361 pkvlekaglt mndidafefh eafsgqilan lkamdsdwfa qnymgrkakv gspplekfnn
      421 wggslslghp fgatgcrlvm aaanrlrkeg gqyglvaaca aggqvghrsl igasrklfs
//
LOCUS       XP_061010966             479 aa            linear   MAM 02-DEC-2023
DEFINITION  trifunctional enzyme subunit beta, mitochondrial isoform X3 [Dama
            dama].
ACCESSION   XP_061010966
VERSION     XP_061010966.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154983.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..479
                     /product="trifunctional enzyme subunit beta, mitochondrial
                     isoform X3"
                     /calculated_mol_wt=51528
     Region          56..464
                     /region_name="thiolase"
                     /note="Thiolase are ubiquitous enzymes that catalyze the
                     reversible thiolytic cleavage of 3-ketoacyl-CoA into
                     acyl-CoA and acetyl-CoA, a 2-step reaction involving a
                     covalent intermediate formed with a catalytic cysteine.
                     They are found in prokaryotes and...; cd00751"
                     /db_xref="CDD:238383"
     Site            order(74,101,115,118,122,133..136,144,151..152,155,170,
                     341,343,345,366,462..463)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238383"
     Site            order(139,429,459)
                     /site_type="active"
                     /db_xref="CDD:238383"
     CDS             1..479
                     /gene="HADHB"
                     /coded_by="XM_061154983.1:195..1634"
                     /db_xref="GeneID:133064632"
ORIGIN      
        1 mtslltytlk nlpstskwal rfcvrplsss sqlqaaaasq tkskktlakp nirnivvvdg
       61 vripfllsgt sykdlmphdl araalsgllh rtsvpkdvvd yiifgtviqe vktsnvarea
      121 algagfsdkt pahtvtmaci ssnqamttav gliasgqcdv vvaggvelms dvpirhsrkm
      181 rkmmldlnka ktlaqrlsvi skfrlnflsp elpavsefst setmghsadr laaafaisre
      241 eqdeyalrsh slakraqdeg llsdivpfkv pgrdtvtqdn girpssldqm aklkpafikp
      301 ygtvtaanss fltdgasavl imaeekalam gykpkaylrd fmyvsqdpkd qlllgptyat
      361 pkvlekaglt mndidafefh eafsgqilan lkamdsdwfa qnymgrkakv gspplekfnn
      421 wggslslghp fgatgcrlvm aaanrlrkeg gqyglvaaca aggqvghrsl igasrklfs
//
LOCUS       XP_061010967             387 aa            linear   MAM 02-DEC-2023
DEFINITION  solute carrier family 35 member F6 isoform X1 [Dama dama].
ACCESSION   XP_061010967
VERSION     XP_061010967.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154984.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..387
                     /product="solute carrier family 35 member F6 isoform X1"
                     /calculated_mol_wt=42051
     Region          63..354
                     /region_name="RhaT"
                     /note="Permease of the drug/metabolite transporter (DMT)
                     superfamily [Carbohydrate transport and metabolism, Amino
                     acid transport and metabolism, General function prediction
                     only]; COG0697"
                     /db_xref="CDD:440461"
     CDS             1..387
                     /gene="SLC35F6"
                     /coded_by="XM_061154984.1:499..1662"
                     /db_xref="GeneID:133064634"
ORIGIN      
        1 mlsekehgka alyilmgifn lkshsdlqfp agtdrrecdh skwadnfvap gcggsqehsf
       61 qhpflqavgm flgefsclaa fyllrcraar hpdtsaepqq pfnpllflpp alcdmtgtsi
      121 myvalnmtsa ssfqmlrgav iiftglfsva flgrrlalsq wlgilatiag lvvvgladll
      181 skhdsqhkls evitgdllii maqiivsiqm vleekfvykh nvhplravgt eglfgfvils
      241 lllipmyyip agsfsgnprg tledaldafc qvgrqplial allgnissia ffnfagisvt
      301 kelsattrmv ldslrtiviw alslalgwea fhplqilgfl illagtalyn glhrpllarl
      361 srgrppaeeg ererllggsr tainnas
//
LOCUS       XP_061010968             371 aa            linear   MAM 02-DEC-2023
DEFINITION  solute carrier family 35 member F6 isoform X2 [Dama dama].
ACCESSION   XP_061010968
VERSION     XP_061010968.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154985.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..371
                     /product="solute carrier family 35 member F6 isoform X2"
                     /calculated_mol_wt=40134
     Region          47..338
                     /region_name="RhaT"
                     /note="Permease of the drug/metabolite transporter (DMT)
                     superfamily [Carbohydrate transport and metabolism, Amino
                     acid transport and metabolism, General function prediction
                     only]; COG0697"
                     /db_xref="CDD:440461"
     CDS             1..371
                     /gene="SLC35F6"
                     /coded_by="XM_061154985.1:122..1237"
                     /db_xref="GeneID:133064634"
ORIGIN      
        1 mawtkyqlfl aglmlvtgsi ntlsakwadn fvapgcggsq ehsfqhpflq avgmflgefs
       61 claafyllrc raarhpdtsa epqqpfnpll flppalcdmt gtsimyvaln mtsassfqml
      121 rgaviiftgl fsvaflgrrl alsqwlgila tiaglvvvgl adllskhdsq hklsevitgd
      181 lliimaqiiv siqmvleekf vykhnvhplr avgteglfgf vilslllipm yyipagsfsg
      241 nprgtledal dafcqvgrqp lialallgni ssiaffnfag isvtkelsat trmvldslrt
      301 iviwalslal gweafhplqi lgflillagt alynglhrpl larlsrgrpp aeegererll
      361 ggsrtainna s
//
LOCUS       XP_061010970             137 aa            linear   MAM 02-DEC-2023
DEFINITION  histone H3-like centromeric protein A [Dama dama].
ACCESSION   XP_061010970
VERSION     XP_061010970.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154987.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..137
                     /product="histone H3-like centromeric protein A"
                     /calculated_mol_wt=15490
     Region          31..131
                     /region_name="HFD_SF"
                     /note="histone fold domain (HFD) superfamily; cl45933"
                     /db_xref="CDD:480273"
     Site            order(39..44,46,60..63,66,69,82..85,115..117,119)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:467036"
     Site            order(41,44,47..48,51..52,54,56,58..59,63..64,66..68,
                     70..71,73,75,80..84,86..87,90..91,94..96,98..100,102..104,
                     107,116..120,124,127)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:467036"
     Site            order(45,48..49,52..53,55,93,97,100,107,111,116)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467036"
     Site            order(105,108..109,112..113,115,121..122,125..126,
                     128..130)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:467036"
     CDS             1..137
                     /gene="CENPA"
                     /coded_by="XM_061154987.1:124..537"
                     /db_xref="GeneID:133064635"
ORIGIN      
        1 mgprrsrkpe tprrrpaspa paarrpapsl gtssrsparr ryrilkeirt lqktthlllr
       61 ktpfcrlare icvqftrgvd fnwqaqalla lqeaaeaflv hlfedaylls lhagrvtlfp
      121 kdvqlarrir giqeglg
//
LOCUS       XP_061010971             564 aa            linear   MAM 02-DEC-2023
DEFINITION  dihydropyrimidinase-related protein 5 [Dama dama].
ACCESSION   XP_061010971
VERSION     XP_061010971.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154988.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..564
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..564
                     /product="dihydropyrimidinase-related protein 5"
                     /calculated_mol_wt=61395
     Region          10..459
                     /region_name="D-HYD"
                     /note="D-hydantoinases (D-HYD) also called
                     dihydropyrimidases (DHPase) and related proteins; DHPases
                     are a family of enzymes that catalyze the reversible
                     hydrolytic ring opening of the amide bond in five- or
                     six-membered cyclic diamides, like dihydropyrimidine...;
                     cd01314"
                     /db_xref="CDD:238639"
     Site            order(21..22,24,37..38,173,194,197,200,223,227,231,234,
                     261..262,264..265,383,388,393)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:238639"
     Site            order(66,68,158,191,247,325)
                     /site_type="active"
                     /db_xref="CDD:238639"
     CDS             1..564
                     /gene="DPYSL5"
                     /coded_by="XM_061154988.1:134..1828"
                     /db_xref="GeneID:133064636"
ORIGIN      
        1 mlansasvri likggkvvnd dctheadvyi engiiqqvgr elmipggakv idatgklvip
       61 ggidtsthfh qtfmnatcvd dfyhgtkaal vggttmiigh vlpdketslv eayekcrgla
      121 dpkvccdyal hvgitwwapk vkvemetlvr ekgvnsfqmf mtykdlymlr dselyqvfha
      181 ckdigaiarv haengelvae gakealdlgi tgpegieisr peeleaeath rvitianrth
      241 cpiylvnvss isagdviaaa kmqgkvvlae tttahatltg lhyyhqdwsh aaayvtvppl
      301 rldtntstyl msllandtln ivasdhrpft tkqkamgked ftkiphgvtg vqdrmsviwe
      361 rgvvggkmde nrfvavtssn aakilnlypr kgriipgada dvvvwdpeat ktisastqvq
      421 ggdfnlyenm rchgvplvti srgrvvyeng vfmcaegtgk fcplrsfpdt vykklvqrek
      481 tlkvrgvdrt pylgdvaviv hpgkkemgtp ladtptrpvt rhggmrdlhe ssfslsgsqi
      541 ddhvpkrasa rilappggrs sgiw
//
LOCUS       XP_061010972             281 aa            linear   MAM 02-DEC-2023
DEFINITION  microtubule-associated protein RP/EB family member 3 isoform X1
            [Dama dama].
ACCESSION   XP_061010972
VERSION     XP_061010972.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154989.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..281
                     /product="microtubule-associated protein RP/EB family
                     member 3 isoform X1"
                     /calculated_mol_wt=31865
     Region          16..279
                     /region_name="BIM1"
                     /note="Microtubule-binding protein involved in cell cycle
                     control [Cell division and chromosome partitioning /
                     Cytoskeleton]; COG5217"
                     /db_xref="CDD:227542"
     CDS             1..281
                     /gene="MAPRE3"
                     /coded_by="XM_061154989.1:155..1000"
                     /db_xref="GeneID:133064637"
ORIGIN      
        1 mavnvystsv tsenlsrhdm lawvndslhl nytkieqlcs gaaycqfmdm lfpgcvhlrk
       61 vkfqaklehe yihnfkvlqa afkkmgvdki ipveklvkgk fqdnfefiqw fkkffdanyd
      121 gkdynpllar qgqdvapppn pgdqifnksk kligtavpqr tsptgpknmq tsgrlsnvap
      181 pcilrknpps arngghetda qilelnqqll dlkltvdgle kerdfyfskl rdielicqeh
      241 esenspvisg iigilyatee gfappeddei eehqqedqde y
//
LOCUS       XP_061010973             266 aa            linear   MAM 02-DEC-2023
DEFINITION  microtubule-associated protein RP/EB family member 3 isoform X2
            [Dama dama].
ACCESSION   XP_061010973
VERSION     XP_061010973.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154990.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..266
                     /product="microtubule-associated protein RP/EB family
                     member 3 isoform X2"
                     /calculated_mol_wt=30263
     Region          16..264
                     /region_name="BIM1"
                     /note="Microtubule-binding protein involved in cell cycle
                     control [Cell division and chromosome partitioning /
                     Cytoskeleton]; COG5217"
                     /db_xref="CDD:227542"
     CDS             1..266
                     /gene="MAPRE3"
                     /coded_by="XM_061154990.1:155..955"
                     /db_xref="GeneID:133064637"
ORIGIN      
        1 mavnvystsv tsenlsrhdm lawvndslhl nytkieqlcs gaaycqfmdm lfpgcvhlrk
       61 vkfqaklehe yihnfkvlqa afkkmgvdki ipveklvkgk fqdnfefiqw fkkffdanyd
      121 gkdynpllar qgqdvapppn pvpqrtsptg pknmqtsgrl snvappcilr knppsarngg
      181 hetdaqilel nqqlldlklt vdglekerdf yfsklrdiel icqehesens pvisgiigil
      241 yateegfapp eddeieehqq edqdey
//
LOCUS       XP_061010974             687 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 214 [Dama dama].
ACCESSION   XP_061010974
VERSION     XP_061010974.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154991.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..687
                     /product="transmembrane protein 214"
                     /calculated_mol_wt=76783
     Region          9..682
                     /region_name="TMEM214"
                     /note="C-terminal, caspase 4 activator; pfam10151"
                     /db_xref="CDD:462966"
     CDS             1..687
                     /gene="TMEM214"
                     /coded_by="XM_061154991.1:41..2104"
                     /db_xref="GeneID:133064638"
ORIGIN      
        1 maaktagggq wevvkkgrrp gagssgkggg gdrralgean gvwkydltpp iqttstlyeq
       61 gfekimkrqn keqvpppave pkkpgnkkqa kkvatltnqn qkqgrfrsle ealkaldlaa
      121 lqkeldksqs vfsgnpsvwl kdlasylnyk lqvppseptl sqhphdypys lvsrelrgii
      181 rgllakaags lelffdhclf tmlqeldktp geslhgyric iqailqdkpk ivttnlgkfl
      241 ellrshqsrp akcltimwal gqagftnlte glrvwlgiml pvlgikslsp faiayldrll
      301 lmhpnltkgf gmigpkdlfp lldfaympnn sltpslqeql cqlyprlkvl afgakpestl
      361 htyfpsflsr atpscppemk kellrsltec lmvdplstsv wrqlypkhls qsslllehll
      421 rsweripkkt qkslqetiqs fkltnqdllr kgsgsnqdvv tcdsacksll qqargfrlpw
      481 arllllvlvf aigflchdfr shssfqasls grllqssgvl pagqqactki ysyslqgysw
      541 leetlpawgs hlltvvrpgl qlawahtnat igflsahcas hlawfgdslv slfqrlqtql
      601 pdalnqllhs lrelllflyh sillptwhml lealaqiqeh cheacrgevt wdcmktqlse
      661 aahwtwlslq dttvafldwa lamisqq
//
LOCUS       XP_061010975             885 aa            linear   MAM 02-DEC-2023
DEFINITION  cytosolic carboxypeptidase-like protein 5 [Dama dama].
ACCESSION   XP_061010975
VERSION     XP_061010975.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154992.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..885
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..885
                     /product="cytosolic carboxypeptidase-like protein 5"
                     /calculated_mol_wt=97383
     Region          10..155
                     /region_name="Pepdidase_M14_N"
                     /note="Cytosolic carboxypeptidase N-terminal domain;
                     pfam18027"
                     /db_xref="CDD:407865"
     Region          183..574
                     /region_name="M14_AGBL5_like"
                     /note="Peptidase M14-like domain of ATP/GTP binding
                     protein (AGBL)-5 and related proteins; cd06236"
                     /db_xref="CDD:349455"
     Site            order(252,255,303,312..313,434..435,444,516)
                     /site_type="active"
                     /db_xref="CDD:349455"
     CDS             1..885
                     /gene="AGBL5"
                     /coded_by="XM_061154992.1:266..2923"
                     /db_xref="GeneID:133064639"
ORIGIN      
        1 melrcggllf ssrfdsgnla hvekvesvsn dgegvaggas astssiassp dyefnvwtrp
       61 dcaetefeng nrswfyfsvr ggtpgkliki nimnmnkqsk lysqgmapfv rtlptrprwe
      121 rirdrptfem tetqfvlsfv hrfvegrgat tffafcypfs ysdcqdllnq ldqrflennp
      181 thsspldtiy yhretlcysl dglrvdllti sschglredr eprleqlfpd astprpfrft
      241 gkrifflssr vhpgetpssf vfngfldfil rpddpraqtl rrlfvfklip mlnpdgvvrg
      301 hyrtdsrgvn lnrqylkpda vlhpaiygak avllyhhvhs rlnsqspseh qhsshlppda
      361 plsdpekads lqnrahlgrs ssgdkpeawt qteaaeqkpn smwimpqesa eveqlapdai
      421 ppresgvayy vdlhghaskr gcfmygnsfs dentqvenml ypklislnsa hfdfqgcnfs
      481 eknmyardrr dgqskegsgr vaiykasgii hsytlecnyn tgrsvnsipa achdngrasp
      541 ppppafpsry tvelfeqvgr amaiaaldma ecnpwprivl sehssltnlr awmlkhvrss
      601 rglstavsvg vskrrgsrtp prsnnglpvs csentlsrar sfstgtsagg ssssqqnspq
      661 mknspsfpfh gsrpvglpgl gsstqkvshr vlgpvreprs qdrrrrqqpm thrptsssla
      721 psptpassnl asshmgscll pnslsisgss csflssgdkt eavmvigkgl lgagpripci
      781 rtrlqarprl aqgspptrrg mrgssgptsp ipqtkessep elgprctprl pqagpprprs
      841 apafspiscs lsdsqsricy sggplgqtev cfvpksppft vsprv
//
LOCUS       XP_061010976             885 aa            linear   MAM 02-DEC-2023
DEFINITION  cytosolic carboxypeptidase-like protein 5 [Dama dama].
ACCESSION   XP_061010976
VERSION     XP_061010976.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154993.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..885
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..885
                     /product="cytosolic carboxypeptidase-like protein 5"
                     /calculated_mol_wt=97383
     Region          10..155
                     /region_name="Pepdidase_M14_N"
                     /note="Cytosolic carboxypeptidase N-terminal domain;
                     pfam18027"
                     /db_xref="CDD:407865"
     Region          183..574
                     /region_name="M14_AGBL5_like"
                     /note="Peptidase M14-like domain of ATP/GTP binding
                     protein (AGBL)-5 and related proteins; cd06236"
                     /db_xref="CDD:349455"
     Site            order(252,255,303,312..313,434..435,444,516)
                     /site_type="active"
                     /db_xref="CDD:349455"
     CDS             1..885
                     /gene="AGBL5"
                     /coded_by="XM_061154993.1:406..3063"
                     /db_xref="GeneID:133064639"
ORIGIN      
        1 melrcggllf ssrfdsgnla hvekvesvsn dgegvaggas astssiassp dyefnvwtrp
       61 dcaetefeng nrswfyfsvr ggtpgkliki nimnmnkqsk lysqgmapfv rtlptrprwe
      121 rirdrptfem tetqfvlsfv hrfvegrgat tffafcypfs ysdcqdllnq ldqrflennp
      181 thsspldtiy yhretlcysl dglrvdllti sschglredr eprleqlfpd astprpfrft
      241 gkrifflssr vhpgetpssf vfngfldfil rpddpraqtl rrlfvfklip mlnpdgvvrg
      301 hyrtdsrgvn lnrqylkpda vlhpaiygak avllyhhvhs rlnsqspseh qhsshlppda
      361 plsdpekads lqnrahlgrs ssgdkpeawt qteaaeqkpn smwimpqesa eveqlapdai
      421 ppresgvayy vdlhghaskr gcfmygnsfs dentqvenml ypklislnsa hfdfqgcnfs
      481 eknmyardrr dgqskegsgr vaiykasgii hsytlecnyn tgrsvnsipa achdngrasp
      541 ppppafpsry tvelfeqvgr amaiaaldma ecnpwprivl sehssltnlr awmlkhvrss
      601 rglstavsvg vskrrgsrtp prsnnglpvs csentlsrar sfstgtsagg ssssqqnspq
      661 mknspsfpfh gsrpvglpgl gsstqkvshr vlgpvreprs qdrrrrqqpm thrptsssla
      721 psptpassnl asshmgscll pnslsisgss csflssgdkt eavmvigkgl lgagpripci
      781 rtrlqarprl aqgspptrrg mrgssgptsp ipqtkessep elgprctprl pqagpprprs
      841 apafspiscs lsdsqsricy sggplgqtev cfvpksppft vsprv
//
LOCUS       XP_061010977             885 aa            linear   MAM 02-DEC-2023
DEFINITION  cytosolic carboxypeptidase-like protein 5 [Dama dama].
ACCESSION   XP_061010977
VERSION     XP_061010977.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154994.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..885
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..885
                     /product="cytosolic carboxypeptidase-like protein 5"
                     /calculated_mol_wt=97383
     Region          10..155
                     /region_name="Pepdidase_M14_N"
                     /note="Cytosolic carboxypeptidase N-terminal domain;
                     pfam18027"
                     /db_xref="CDD:407865"
     Region          183..574
                     /region_name="M14_AGBL5_like"
                     /note="Peptidase M14-like domain of ATP/GTP binding
                     protein (AGBL)-5 and related proteins; cd06236"
                     /db_xref="CDD:349455"
     Site            order(252,255,303,312..313,434..435,444,516)
                     /site_type="active"
                     /db_xref="CDD:349455"
     CDS             1..885
                     /gene="AGBL5"
                     /coded_by="XM_061154994.1:373..3030"
                     /db_xref="GeneID:133064639"
ORIGIN      
        1 melrcggllf ssrfdsgnla hvekvesvsn dgegvaggas astssiassp dyefnvwtrp
       61 dcaetefeng nrswfyfsvr ggtpgkliki nimnmnkqsk lysqgmapfv rtlptrprwe
      121 rirdrptfem tetqfvlsfv hrfvegrgat tffafcypfs ysdcqdllnq ldqrflennp
      181 thsspldtiy yhretlcysl dglrvdllti sschglredr eprleqlfpd astprpfrft
      241 gkrifflssr vhpgetpssf vfngfldfil rpddpraqtl rrlfvfklip mlnpdgvvrg
      301 hyrtdsrgvn lnrqylkpda vlhpaiygak avllyhhvhs rlnsqspseh qhsshlppda
      361 plsdpekads lqnrahlgrs ssgdkpeawt qteaaeqkpn smwimpqesa eveqlapdai
      421 ppresgvayy vdlhghaskr gcfmygnsfs dentqvenml ypklislnsa hfdfqgcnfs
      481 eknmyardrr dgqskegsgr vaiykasgii hsytlecnyn tgrsvnsipa achdngrasp
      541 ppppafpsry tvelfeqvgr amaiaaldma ecnpwprivl sehssltnlr awmlkhvrss
      601 rglstavsvg vskrrgsrtp prsnnglpvs csentlsrar sfstgtsagg ssssqqnspq
      661 mknspsfpfh gsrpvglpgl gsstqkvshr vlgpvreprs qdrrrrqqpm thrptsssla
      721 psptpassnl asshmgscll pnslsisgss csflssgdkt eavmvigkgl lgagpripci
      781 rtrlqarprl aqgspptrrg mrgssgptsp ipqtkessep elgprctprl pqagpprprs
      841 apafspiscs lsdsqsricy sggplgqtev cfvpksppft vsprv
//
LOCUS       XP_061010978             885 aa            linear   MAM 02-DEC-2023
DEFINITION  cytosolic carboxypeptidase-like protein 5 [Dama dama].
ACCESSION   XP_061010978
VERSION     XP_061010978.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154995.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..885
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..885
                     /product="cytosolic carboxypeptidase-like protein 5"
                     /calculated_mol_wt=97383
     Region          10..155
                     /region_name="Pepdidase_M14_N"
                     /note="Cytosolic carboxypeptidase N-terminal domain;
                     pfam18027"
                     /db_xref="CDD:407865"
     Region          183..574
                     /region_name="M14_AGBL5_like"
                     /note="Peptidase M14-like domain of ATP/GTP binding
                     protein (AGBL)-5 and related proteins; cd06236"
                     /db_xref="CDD:349455"
     Site            order(252,255,303,312..313,434..435,444,516)
                     /site_type="active"
                     /db_xref="CDD:349455"
     CDS             1..885
                     /gene="AGBL5"
                     /coded_by="XM_061154995.1:1206..3863"
                     /db_xref="GeneID:133064639"
ORIGIN      
        1 melrcggllf ssrfdsgnla hvekvesvsn dgegvaggas astssiassp dyefnvwtrp
       61 dcaetefeng nrswfyfsvr ggtpgkliki nimnmnkqsk lysqgmapfv rtlptrprwe
      121 rirdrptfem tetqfvlsfv hrfvegrgat tffafcypfs ysdcqdllnq ldqrflennp
      181 thsspldtiy yhretlcysl dglrvdllti sschglredr eprleqlfpd astprpfrft
      241 gkrifflssr vhpgetpssf vfngfldfil rpddpraqtl rrlfvfklip mlnpdgvvrg
      301 hyrtdsrgvn lnrqylkpda vlhpaiygak avllyhhvhs rlnsqspseh qhsshlppda
      361 plsdpekads lqnrahlgrs ssgdkpeawt qteaaeqkpn smwimpqesa eveqlapdai
      421 ppresgvayy vdlhghaskr gcfmygnsfs dentqvenml ypklislnsa hfdfqgcnfs
      481 eknmyardrr dgqskegsgr vaiykasgii hsytlecnyn tgrsvnsipa achdngrasp
      541 ppppafpsry tvelfeqvgr amaiaaldma ecnpwprivl sehssltnlr awmlkhvrss
      601 rglstavsvg vskrrgsrtp prsnnglpvs csentlsrar sfstgtsagg ssssqqnspq
      661 mknspsfpfh gsrpvglpgl gsstqkvshr vlgpvreprs qdrrrrqqpm thrptsssla
      721 psptpassnl asshmgscll pnslsisgss csflssgdkt eavmvigkgl lgagpripci
      781 rtrlqarprl aqgspptrrg mrgssgptsp ipqtkessep elgprctprl pqagpprprs
      841 apafspiscs lsdsqsricy sggplgqtev cfvpksppft vsprv
//
LOCUS       XP_061010979             370 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133064641 isoform X1 [Dama dama].
ACCESSION   XP_061010979
VERSION     XP_061010979.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154996.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..370
                     /product="uncharacterized protein LOC133064641 isoform X1"
                     /calculated_mol_wt=42097
     Region          62..263
                     /region_name="Gag_p30"
                     /note="Gag P30 core shell protein; pfam02093"
                     /db_xref="CDD:426597"
     CDS             1..370
                     /gene="LOC133064641"
                     /coded_by="XM_061154996.1:1307..2419"
                     /db_xref="GeneID:133064641"
ORIGIN      
        1 mrsegeslpv asapppyvps plglrseskl cplqkkrsss dkicplrevp dgeggtmhvh
       61 vpfsmqditq ckeqlgsyse npqkfkdkfe rlslnfsltw rdimviltrc cndeekaril
      121 dqarkvader qridvslapa eeaipstepd wdpntragke slrhlitcll qemtqgvrkv
      181 vnynkikevt qrenenpalf lgrlteafkn ftetdltsme grvllahsfi tqaapdirrk
      241 lqklgkgpet pisnlveean rvflnrdree eakreqkevr kdrkierqtq alaqqqakil
      301 alihpatmre srgeqgkkkd lnnpprlsrt qcaycredgh wkrecpyhpk grrmvtptpa
      361 psvlvlgdqd
//
LOCUS       XP_061010980             301 aa            linear   MAM 02-DEC-2023
DEFINITION  syncytin-2-like isoform X2 [Dama dama].
ACCESSION   XP_061010980
VERSION     XP_061010980.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154997.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..301
                     /product="syncytin-2-like isoform X2"
                     /calculated_mol_wt=32921
     Region          <126..286
                     /region_name="TLV_coat"
                     /note="ENV polyprotein (coat polyprotein); pfam00429"
                     /db_xref="CDD:306850"
     Region          212..287
                     /region_name="HTLV-1-like_HR1-HR2"
                     /note="heptad repeat 1-heptad repeat 2 region (ectodomain)
                     of the transmembrane subunit of human T-cell leukemia
                     virus type 1 (HTLV-1), and related domains; cd09851"
                     /db_xref="CDD:197368"
     Site            215..253
                     /site_type="other"
                     /note="HR1"
                     /db_xref="CDD:197368"
     Site            order(218..220,222..223,225..226,228..230,232..234,
                     236..237,239..241,243..251,253..255,264..265,268,271..273,
                     280,283..284,287)
                     /site_type="other"
                     /note="homotrimer interface [polypeptide binding]"
                     /db_xref="CDD:197368"
     Site            245..261
                     /site_type="other"
                     /note="immunosuppressive region"
                     /db_xref="CDD:197368"
     Site            247
                     /site_type="other"
                     /note="Cl binding site [ion binding]"
                     /db_xref="CDD:197368"
     Site            262..269
                     /site_type="other"
                     /note="CX(6)C motif"
                     /db_xref="CDD:197368"
     Site            278..287
                     /site_type="other"
                     /note="HR2"
                     /db_xref="CDD:197368"
     CDS             1..301
                     /gene="LOC133064641"
                     /coded_by="XM_061154997.1:1089..1994"
                     /db_xref="GeneID:133064641"
ORIGIN      
        1 mpltsleksm fcsgrpknht rsswflnrtg nsdpcyslvg vptpknltlw wepkrntlyl
       61 edktqdasqh lnpflnalta agfaasgvtv ssqllkdcpc simpcsscka ngnpvplwqt
      121 hfaaqlkpsh gvyficgdka ylslppfwsg tcslgyvtph idlawsntsl plpiytnqri
      181 rraviltpif lalgltaglt gvavggtslh kfqqlstdta vsiektartl qrlqsqldsl
      241 aamvlqdrra ldlltagqgg tclylkeecc fyynqswqvq edikgllkqa tkirdlsstg
      301 v
//
LOCUS       XP_061010981             301 aa            linear   MAM 02-DEC-2023
DEFINITION  syncytin-2-like isoform X2 [Dama dama].
ACCESSION   XP_061010981
VERSION     XP_061010981.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154998.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..301
                     /product="syncytin-2-like isoform X2"
                     /calculated_mol_wt=32921
     Region          <126..286
                     /region_name="TLV_coat"
                     /note="ENV polyprotein (coat polyprotein); pfam00429"
                     /db_xref="CDD:306850"
     Region          212..287
                     /region_name="HTLV-1-like_HR1-HR2"
                     /note="heptad repeat 1-heptad repeat 2 region (ectodomain)
                     of the transmembrane subunit of human T-cell leukemia
                     virus type 1 (HTLV-1), and related domains; cd09851"
                     /db_xref="CDD:197368"
     Site            215..253
                     /site_type="other"
                     /note="HR1"
                     /db_xref="CDD:197368"
     Site            order(218..220,222..223,225..226,228..230,232..234,
                     236..237,239..241,243..251,253..255,264..265,268,271..273,
                     280,283..284,287)
                     /site_type="other"
                     /note="homotrimer interface [polypeptide binding]"
                     /db_xref="CDD:197368"
     Site            245..261
                     /site_type="other"
                     /note="immunosuppressive region"
                     /db_xref="CDD:197368"
     Site            247
                     /site_type="other"
                     /note="Cl binding site [ion binding]"
                     /db_xref="CDD:197368"
     Site            262..269
                     /site_type="other"
                     /note="CX(6)C motif"
                     /db_xref="CDD:197368"
     Site            278..287
                     /site_type="other"
                     /note="HR2"
                     /db_xref="CDD:197368"
     CDS             1..301
                     /gene="LOC133064641"
                     /coded_by="XM_061154998.1:984..1889"
                     /db_xref="GeneID:133064641"
ORIGIN      
        1 mpltsleksm fcsgrpknht rsswflnrtg nsdpcyslvg vptpknltlw wepkrntlyl
       61 edktqdasqh lnpflnalta agfaasgvtv ssqllkdcpc simpcsscka ngnpvplwqt
      121 hfaaqlkpsh gvyficgdka ylslppfwsg tcslgyvtph idlawsntsl plpiytnqri
      181 rraviltpif lalgltaglt gvavggtslh kfqqlstdta vsiektartl qrlqsqldsl
      241 aamvlqdrra ldlltagqgg tclylkeecc fyynqswqvq edikgllkqa tkirdlsstg
      301 v
//
LOCUS       XP_061010982              71 aa            linear   MAM 02-DEC-2023
DEFINITION  dolichyl-diphosphooligosaccharide--protein glycosyltransferase
            subunit 4 [Dama dama].
ACCESSION   XP_061010982
VERSION     XP_061010982.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061154999.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..71
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..71
                     /product="dolichyl-diphosphooligosaccharide--protein
                     glycosyltransferase subunit 4"
                     /calculated_mol_wt=8005
     Region          35..68
                     /region_name="Ost4"
                     /note="Oligosaccaryltransferase; pfam10215"
                     /db_xref="CDD:431142"
     CDS             1..71
                     /gene="OST4"
                     /coded_by="XM_061154999.1:59..274"
                     /db_xref="GeneID:133064642"
ORIGIN      
        1 mpglgpnwrc klpvqvsylk idprprrnra qlismitdvq laifanmlgv slfllvvlyh
       61 yvavnnpkkq e
//
LOCUS       XP_061010983            1013 aa            linear   MAM 02-DEC-2023
DEFINITION  EMILIN-1 [Dama dama].
ACCESSION   XP_061010983
VERSION     XP_061010983.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155000.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1013
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1013
                     /product="EMILIN-1"
                     /calculated_mol_wt=106636
     Region          57..128
                     /region_name="EMI"
                     /note="EMI domain; pfam07546"
                     /db_xref="CDD:462204"
     Region          178..>574
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     Region          <635..>804
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          864..1007
                     /region_name="C1q"
                     /note="C1q domain; cl23878"
                     /db_xref="CDD:420072"
     CDS             1..1013
                     /gene="EMILIN1"
                     /coded_by="XM_061155000.1:464..3505"
                     /db_xref="GeneID:133064643"
ORIGIN      
        1 mapgtlwscy lccllttavg aasypprgys lytgsggals sggtqaqsap rpasrhrnwc
       61 ayvvtrtvsc vledgvetfi kpdyqpcgwg qpqcsrsimy rsflrpryrv ayktvtdmew
      121 rccqgyggdd caegpapalg pvpttprprp qparpnlsgs sagshlsglg gegpgesekv
      181 qqleeqvqsl tkelqglrgv lqglsgrlte dvqravetaf ngrqqpadaa arpgvhetln
      241 eiqqqlqlld nrvsthdqel ghlnnhhsgs grapdptpap pghseellre leqrlqescs
      301 vclagldgfr rqqqqdrerl ralekllasv eerqrhlagq algrwapqec cppelgrrla
      361 elerrldvva gsvtvlsgrr gthlggasgq gghppgytsl asrlsrledr fnstlgpsee
      421 qeegwlgrpg glghwlpaar gkleklegql anvsgelggr lnqleeqvag avqacgqlcs
      481 gapgeqdsqv reilsalerr vldsegqlrl vgsdlhklga ageaqqtale qlqgavgllh
      541 grvdtlgeta aefalqlnlt aarlgqlegl lqargeegcg acggvqeelg rlrdgvercs
      601 cpllpprgpg agpgvggpsr gpldgfsvfg gssgsalqal qgelsevilt fsslndslhe
      661 lqttvegqga dladlgatkd riiseinrlq qeatehates eerfrgleeg qaqagqcpsl
      721 egrlgrlegv cerldtvagg lqglreglsr hvaglwaglr etnstsqtqa allekllegq
      781 aglgkrlgtl nsslllledq lhqlslkdlt gpageagppg ppgmqgppgp agppgppgkd
      841 gqkgpmgppg pqgeqgpega paasvprvaf saalslprse pgtvpfdrvl lndggyydpe
      901 tgvftaplag ryllsavltg hrhekveavl srsnlgvari dsggyepegl enkpvaesqp
      961 spgalgvfsl ilplqvgdtv cidlvmgqla hseepltifs gallygdlel eqa
//
LOCUS       XP_061010984             418 aa            linear   MAM 02-DEC-2023
DEFINITION  prolactin regulatory element-binding protein isoform X1 [Dama
            dama].
ACCESSION   XP_061010984
VERSION     XP_061010984.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155001.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..418
                     /product="prolactin regulatory element-binding protein
                     isoform X1"
                     /calculated_mol_wt=45649
     Region          73..110
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          154..194
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <161..354
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     CDS             1..418
                     /gene="PREB"
                     /coded_by="XM_061155001.1:352..1608"
                     /db_xref="GeneID:133064644"
ORIGIN      
        1 mgrrrtpely rapfplyalr vdpsagllia aggggaaktg ikngvhflql eqingrlsas
       61 llhshdtetr atmnlalagn ilaagqdahc qllrfqihqq kgknkaekag skeqgprqrk
      121 gaapaekksg aethqegvef svenlqevqt dfsrdplqkv vcfnhdntll atggtdgcvr
      181 vwkvptlekv lefkahegei edlalgpdgk lvtvgwdlka svwqkdqlvt qlhwqengpt
      241 fsntpyryqa crfgqvpdqp aglrlftvqi phkrlrqppp cyltawdgst flplrtrpcg
      301 hevisclsvs esgtflglgt vtgsvaiyia fslqrlyyvk eahgivvtdv aflpekgrgp
      361 ellgshetal fsvavdsrcq lhllpsrrsa pvwlllllcv glivmtilll qsafpgfl
//
LOCUS       XP_061010985             391 aa            linear   MAM 02-DEC-2023
DEFINITION  prolactin regulatory element-binding protein isoform X2 [Dama
            dama].
ACCESSION   XP_061010985
VERSION     XP_061010985.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155002.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..391
                     /product="prolactin regulatory element-binding protein
                     isoform X2"
                     /calculated_mol_wt=42731
     Region          160..>331
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          163..197
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          278..313
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..391
                     /gene="PREB"
                     /coded_by="XM_061155002.1:354..1529"
                     /db_xref="GeneID:133064644"
ORIGIN      
        1 mgrrrtpely rapfplyalr vdpsagllia aggggaaktg ikngvhflql eqingrlsas
       61 llhshdtetr atmnlalagn ilaagqdahc qllrfqihqq kgknkaekag skeqgprqrk
      121 gaapaekksg aethqegvef svenlqevqt dfsrdplqkv vcfnhdntll atggtdgcvr
      181 vwklvtvgwd lkasvwqkdq lvtqlhwqen gptfsntpyr yqacrfgqvp dqpaglrlft
      241 vqiphkrlrq pppcyltawd gstflplrtr pcgheviscl svsesgtflg lgtvtgsvai
      301 yiafslqrly yvkeahgivv tdvaflpekg rgpellgshe talfsvavds rcqlhllpsr
      361 rsapvwllll lcvglivmti lllqsafpgf l
//
LOCUS       XP_061010986             375 aa            linear   MAM 02-DEC-2023
DEFINITION  prolactin regulatory element-binding protein isoform X3 [Dama
            dama].
ACCESSION   XP_061010986
VERSION     XP_061010986.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155003.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..375
                     /product="prolactin regulatory element-binding protein
                     isoform X3"
                     /calculated_mol_wt=40142
     Region          184..248
                     /region_name="EF-hand_7"
                     /note="EF-hand domain pair; pfam13499"
                     /db_xref="CDD:463900"
     CDS             1..375
                     /gene="PREB"
                     /coded_by="XM_061155003.1:368..1495"
                     /db_xref="GeneID:133064644"
ORIGIN      
        1 mgrrrtpely rapfplyalr vdpsagllia aggggaaktg ikngvhflql eqingrlsas
       61 llhshdtetr atmnlalagn ilaagqdahc qllrfqihqq kgknkaekav tgrmlpvtmr
      121 tllllllpls qaapkdgtmr ldpeaqhlpl pnpfepgqeq lrllqsylkg lermeeepeh
      181 msreqvllyl falhdydqsg qldglellsm ltaalapgas dspttnpvil vvdkvletqd
      241 lngdglmtpa elvnfpgeap rhtepkepse pqdvgmqpll akspsrqeah ealspgeaag
      301 gqaearrefl epvqeaggqa dalreapgpg gevggqvetg daggraeell getlgskntp
      361 nelevhaiql ensem
//
LOCUS       XP_061010987             374 aa            linear   MAM 02-DEC-2023
DEFINITION  prolactin regulatory element-binding protein isoform X4 [Dama
            dama].
ACCESSION   XP_061010987
VERSION     XP_061010987.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155004.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..374
                     /product="prolactin regulatory element-binding protein
                     isoform X4"
                     /calculated_mol_wt=40864
     Region          73..110
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          154..194
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <161..>242
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     CDS             1..374
                     /gene="PREB"
                     /coded_by="XM_061155004.1:355..1479"
                     /db_xref="GeneID:133064644"
ORIGIN      
        1 mgrrrtpely rapfplyalr vdpsagllia aggggaaktg ikngvhflql eqingrlsas
       61 llhshdtetr atmnlalagn ilaagqdahc qllrfqihqq kgknkaekag skeqgprqrk
      121 gaapaekksg aethqegvef svenlqevqt dfsrdplqkv vcfnhdntll atggtdgcvr
      181 vwkvptlekv lefkahegei edlalgpdgk lvtvgwdlka svwqkdqlvt qlhwqengpt
      241 fsntpyryqa crfgqvpdqp aglrlftvqi phkrlrqppp cyltawdgst flplrtrpcg
      301 hevisclsvr kcscvaaaaa vcwaycydhp aapeclsrfp lasllpgnqg pghchlldqn
      361 rgldptahst wvhs
//
LOCUS       XP_061010988             351 aa            linear   MAM 02-DEC-2023
DEFINITION  prolactin regulatory element-binding protein isoform X5 [Dama
            dama].
ACCESSION   XP_061010988
VERSION     XP_061010988.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155005.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..351
                     /product="prolactin regulatory element-binding protein
                     isoform X5"
                     /calculated_mol_wt=38149
     Region          73..110
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          154..194
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <161..328
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     CDS             1..351
                     /gene="PREB"
                     /coded_by="XM_061155005.1:354..1409"
                     /db_xref="GeneID:133064644"
ORIGIN      
        1 mgrrrtpely rapfplyalr vdpsagllia aggggaaktg ikngvhflql eqingrlsas
       61 llhshdtetr atmnlalagn ilaagqdahc qllrfqihqq kgknkaekag skeqgprqrk
      121 gaapaekksg aethqegvef svenlqevqt dfsrdplqkv vcfnhdntll atggtdgcvr
      181 vwkvptlekv lefkahegei edlalgpdgk lvtvgwdlka svwqkdqlvt qlhwqengpt
      241 fsntpyryqa crfgqvpdqp aglrlftvqi phkrlrqppp cyltawdgst flplrtrpcg
      301 hevisclsvs esgtflglgt vtgsvaiyia fslqevllcg cccccvlgll l
//
LOCUS       XP_061010989             262 aa            linear   MAM 02-DEC-2023
DEFINITION  prolactin regulatory element-binding protein isoform X6 [Dama
            dama].
ACCESSION   XP_061010989
VERSION     XP_061010989.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155006.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..262
                     /product="prolactin regulatory element-binding protein
                     isoform X6"
                     /calculated_mol_wt=28036
     Region          71..135
                     /region_name="EF-hand_7"
                     /note="EF-hand domain pair; pfam13499"
                     /db_xref="CDD:463900"
     CDS             1..262
                     /gene="PREB"
                     /coded_by="XM_061155006.1:136..924"
                     /db_xref="GeneID:133064644"
ORIGIN      
        1 mlpvtmrtll llllplsqaa pkdgtmrldp eaqhlplpnp fepgqeqlrl lqsylkgler
       61 meeepehmsr eqvllylfal hdydqsgqld glellsmlta alapgasdsp ttnpvilvvd
      121 kvletqdlng dglmtpaelv nfpgeaprht epkepsepqd vgmqpllaks psrqeaheal
      181 spgeaaggqa earreflepv qeaggqadal reapgpggev ggqvetgdag graeellget
      241 lgskntpnel evhaiqlens em
//
LOCUS       XP_061010990             262 aa            linear   MAM 02-DEC-2023
DEFINITION  prolactin regulatory element-binding protein isoform X6 [Dama
            dama].
ACCESSION   XP_061010990
VERSION     XP_061010990.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155007.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..262
                     /product="prolactin regulatory element-binding protein
                     isoform X6"
                     /calculated_mol_wt=28036
     Region          71..135
                     /region_name="EF-hand_7"
                     /note="EF-hand domain pair; pfam13499"
                     /db_xref="CDD:463900"
     CDS             1..262
                     /gene="PREB"
                     /coded_by="XM_061155007.1:240..1028"
                     /db_xref="GeneID:133064644"
ORIGIN      
        1 mlpvtmrtll llllplsqaa pkdgtmrldp eaqhlplpnp fepgqeqlrl lqsylkgler
       61 meeepehmsr eqvllylfal hdydqsgqld glellsmlta alapgasdsp ttnpvilvvd
      121 kvletqdlng dglmtpaelv nfpgeaprht epkepsepqd vgmqpllaks psrqeaheal
      181 spgeaaggqa earreflepv qeaggqadal reapgpggev ggqvetgdag graeellget
      241 lgskntpnel evhaiqlens em
//
LOCUS       XP_061010991             262 aa            linear   MAM 02-DEC-2023
DEFINITION  prolactin regulatory element-binding protein isoform X6 [Dama
            dama].
ACCESSION   XP_061010991
VERSION     XP_061010991.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155008.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..262
                     /product="prolactin regulatory element-binding protein
                     isoform X6"
                     /calculated_mol_wt=28036
     Region          71..135
                     /region_name="EF-hand_7"
                     /note="EF-hand domain pair; pfam13499"
                     /db_xref="CDD:463900"
     CDS             1..262
                     /gene="PREB"
                     /coded_by="XM_061155008.1:367..1155"
                     /db_xref="GeneID:133064644"
ORIGIN      
        1 mlpvtmrtll llllplsqaa pkdgtmrldp eaqhlplpnp fepgqeqlrl lqsylkgler
       61 meeepehmsr eqvllylfal hdydqsgqld glellsmlta alapgasdsp ttnpvilvvd
      121 kvletqdlng dglmtpaelv nfpgeaprht epkepsepqd vgmqpllaks psrqeaheal
      181 spgeaaggqa earreflepv qeaggqadal reapgpggev ggqvetgdag graeellget
      241 lgskntpnel evhaiqlens em
//
LOCUS       XP_061010992             406 aa            linear   MAM 02-DEC-2023
DEFINITION  ketohexokinase isoform X1 [Dama dama].
ACCESSION   XP_061010992
VERSION     XP_061010992.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155009.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..406
                     /product="ketohexokinase isoform X1"
                     /calculated_mol_wt=44834
     Region          5..316
                     /region_name="Ketohexokinase"
                     /note="Ketohexokinase (fructokinase, KHK) catalyzes the
                     phosphorylation of fructose to fructose-1-phosphate (F1P),
                     the first step in the metabolism of dietary fructose. KHK
                     can also phosphorylate several other furanose sugars. It
                     is found in higher eukaryotes...; cd01939"
                     /db_xref="CDD:238914"
     Site            order(45,300,303)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238914"
     CDS             1..406
                     /gene="KHK"
                     /coded_by="XM_061155009.1:453..1673"
                     /db_xref="GeneID:133064646"
ORIGIN      
        1 meekqilcvg lvvldiinvm dkypeedtds rclsqrwqrg gnasnsctvl sllgapcafm
       61 gslapghvad fvlddlrrys vdlrymvfqt tgsvpistvi iseasgsrti lhaysflvad
      121 frqrgvdvsq vawqsrgetp csccivnnsn gsrtivlydt nlpdvsakdf ekveltrfkw
      181 ihiegrnase qvkmlqrieq hnarqppegk iqvsvevekp reelyqlfgy gdvvfvskdv
      241 akhfgfrsae ealrglfsrv rkgatlvcaw aeegadalgp dgrllhsdaf ppprvvdtlg
      301 agdtfnaavi fslsqgdpgs ipglgrspge gkstpvfwpg efhgpygvak nrtrlsnfhf
      361 hlgyvtefhl pqfphlsngd hsawsynyae deitiykmps mmpgvh
//
LOCUS       XP_061010993             383 aa            linear   MAM 02-DEC-2023
DEFINITION  ketohexokinase isoform X2 [Dama dama].
ACCESSION   XP_061010993
VERSION     XP_061010993.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155010.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..383
                     /product="ketohexokinase isoform X2"
                     /calculated_mol_wt=41942
     Region          5..316
                     /region_name="Ketohexokinase"
                     /note="Ketohexokinase (fructokinase, KHK) catalyzes the
                     phosphorylation of fructose to fructose-1-phosphate (F1P),
                     the first step in the metabolism of dietary fructose. KHK
                     can also phosphorylate several other furanose sugars. It
                     is found in higher eukaryotes...; cd01939"
                     /db_xref="CDD:238914"
     Site            order(45,300,303)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238914"
     CDS             1..383
                     /gene="KHK"
                     /coded_by="XM_061155010.1:450..1601"
                     /db_xref="GeneID:133064646"
ORIGIN      
        1 meekqilcvg lvvldiinvm dkypeedtds rclsqrwqrg gnasnsctvl sllgapcafm
       61 gslapghvad fvlddlrrys vdlrymvfqt tgsvpistvi iseasgsrti lhaysflvad
      121 frqrgvdvsq vawqsrgetp csccivnnsn gsrtivlydt nlpdvsakdf ekveltrfkw
      181 ihiegrnase qvkmlqrieq hnarqppegk iqvsvevekp reelyqlfgy gdvvfvskdv
      241 akhfgfrsae ealrglfsrv rkgatlvcaw aeegadalgp dgrllhsdaf ppprvvdtlg
      301 agdtfnaavi fslsqgdpgs ipglgrspge gkstpvfwpg efhgpygvak nrtrlsnfhf
      361 hlgqcsatre atamrnpkpt tge
//
LOCUS       XP_061010994             372 aa            linear   MAM 02-DEC-2023
DEFINITION  ketohexokinase isoform X3 [Dama dama].
ACCESSION   XP_061010994
VERSION     XP_061010994.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155011.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..372
                     /product="ketohexokinase isoform X3"
                     /calculated_mol_wt=40858
     Region          5..316
                     /region_name="Ketohexokinase"
                     /note="Ketohexokinase (fructokinase, KHK) catalyzes the
                     phosphorylation of fructose to fructose-1-phosphate (F1P),
                     the first step in the metabolism of dietary fructose. KHK
                     can also phosphorylate several other furanose sugars. It
                     is found in higher eukaryotes...; cd01939"
                     /db_xref="CDD:238914"
     Site            order(45,300,303)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238914"
     CDS             1..372
                     /gene="KHK"
                     /coded_by="XM_061155011.1:446..1564"
                     /db_xref="GeneID:133064646"
ORIGIN      
        1 meekqilcvg lvvldiinvm dkypeedtds rclsqrwqrg gnasnsctvl sllgapcafm
       61 gslapghvad fvlddlrrys vdlrymvfqt tgsvpistvi iseasgsrti lhaysflvad
      121 frqrgvdvsq vawqsrgetp csccivnnsn gsrtivlydt nlpdvsakdf ekveltrfkw
      181 ihiegrnase qvkmlqrieq hnarqppegk iqvsvevekp reelyqlfgy gdvvfvskdv
      241 akhfgfrsae ealrglfsrv rkgatlvcaw aeegadalgp dgrllhsdaf ppprvvdtlg
      301 agdtfnaavi fslsqgdpgs ipglgrspge gkstpvfwpg efhgpygvak nrtrlsnfhf
      361 hlgalrqekp pq
//
LOCUS       XP_061010995             366 aa            linear   MAM 02-DEC-2023
DEFINITION  ketohexokinase isoform X4 [Dama dama].
ACCESSION   XP_061010995
VERSION     XP_061010995.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155012.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..366
                     /product="ketohexokinase isoform X4"
                     /calculated_mol_wt=40085
     Region          5..316
                     /region_name="Ketohexokinase"
                     /note="Ketohexokinase (fructokinase, KHK) catalyzes the
                     phosphorylation of fructose to fructose-1-phosphate (F1P),
                     the first step in the metabolism of dietary fructose. KHK
                     can also phosphorylate several other furanose sugars. It
                     is found in higher eukaryotes...; cd01939"
                     /db_xref="CDD:238914"
     Site            order(45,300,303)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238914"
     CDS             1..366
                     /gene="KHK"
                     /coded_by="XM_061155012.1:445..1545"
                     /db_xref="GeneID:133064646"
ORIGIN      
        1 meekqilcvg lvvldiinvm dkypeedtds rclsqrwqrg gnasnsctvl sllgapcafm
       61 gslapghvad fvlddlrrys vdlrymvfqt tgsvpistvi iseasgsrti lhaysflvad
      121 frqrgvdvsq vawqsrgetp csccivnnsn gsrtivlydt nlpdvsakdf ekveltrfkw
      181 ihiegrnase qvkmlqrieq hnarqppegk iqvsvevekp reelyqlfgy gdvvfvskdv
      241 akhfgfrsae ealrglfsrv rkgatlvcaw aeegadalgp dgrllhsdaf ppprvvdtlg
      301 agdtfnaavi fslsqgdpgs ipglgrspge gkstpvfwpg efhgpygvak nrtrlsnfhf
      361 hlgsst
//
LOCUS       XP_061010996             361 aa            linear   MAM 02-DEC-2023
DEFINITION  ketohexokinase isoform X5 [Dama dama].
ACCESSION   XP_061010996
VERSION     XP_061010996.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155013.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..361
                     /product="ketohexokinase isoform X5"
                     /calculated_mol_wt=39786
     Region          5..271
                     /region_name="Ketohexokinase"
                     /note="Ketohexokinase (fructokinase, KHK) catalyzes the
                     phosphorylation of fructose to fructose-1-phosphate (F1P),
                     the first step in the metabolism of dietary fructose. KHK
                     can also phosphorylate several other furanose sugars. It
                     is found in higher eukaryotes...; cd01939"
                     /db_xref="CDD:238914"
     Site            order(45,255,258)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238914"
     CDS             1..361
                     /gene="KHK"
                     /coded_by="XM_061155013.1:441..1526"
                     /db_xref="GeneID:133064646"
ORIGIN      
        1 meekqilcvg lvvldiinvm dkypeedtds rclsqrwqrg gnasnsctvl sllgapcafm
       61 gslapghvad flvadfrqrg vdvsqvawqs rgetpcscci vnnsngsrti vlydtnlpdv
      121 sakdfekvel trfkwihieg rnaseqvkml qrieqhnarq ppegkiqvsv evekpreely
      181 qlfgygdvvf vskdvakhfg frsaeealrg lfsrvrkgat lvcawaeega dalgpdgrll
      241 hsdafppprv vdtlgagdtf naavifslsq gdpgsipglg rspgegkstp vfwpgefhgp
      301 ygvaknrtrl snfhfhlgyv tefhlpqfph lsngdhsaws ynyaedeiti ykmpsmmpgv
      361 h
//
LOCUS       XP_061010997             361 aa            linear   MAM 02-DEC-2023
DEFINITION  ketohexokinase isoform X6 [Dama dama].
ACCESSION   XP_061010997
VERSION     XP_061010997.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155014.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..361
                     /product="ketohexokinase isoform X6"
                     /calculated_mol_wt=39927
     Region          5..271
                     /region_name="Ketohexokinase"
                     /note="Ketohexokinase (fructokinase, KHK) catalyzes the
                     phosphorylation of fructose to fructose-1-phosphate (F1P),
                     the first step in the metabolism of dietary fructose. KHK
                     can also phosphorylate several other furanose sugars. It
                     is found in higher eukaryotes...; cd01939"
                     /db_xref="CDD:238914"
     Site            order(45,255,258)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238914"
     CDS             1..361
                     /gene="KHK"
                     /coded_by="XM_061155014.1:459..1544"
                     /db_xref="GeneID:133064646"
ORIGIN      
        1 meekqilcvg lvvldiinvm dkypeedtds rclsqrwqrg gnasnsctvl sllgapcafm
       61 gslapghvad fvlddlrrys vdlrymvfqt tgsvpistvi iseasgsrti lhayrnlpdv
      121 sakdfekvel trfkwihieg rnaseqvkml qrieqhnarq ppegkiqvsv evekpreely
      181 qlfgygdvvf vskdvakhfg frsaeealrg lfsrvrkgat lvcawaeega dalgpdgrll
      241 hsdafppprv vdtlgagdtf naavifslsq gdpgsipglg rspgegkstp vfwpgefhgp
      301 ygvaknrtrl snfhfhlgyv tefhlpqfph lsngdhsaws ynyaedeiti ykmpsmmpgv
      361 h
//
LOCUS       XP_061010998             360 aa            linear   MAM 02-DEC-2023
DEFINITION  ketohexokinase isoform X7 [Dama dama].
ACCESSION   XP_061010998
VERSION     XP_061010998.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155015.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..360
                     /product="ketohexokinase isoform X7"
                     /calculated_mol_wt=39577
     Region          5..317
                     /region_name="Ketohexokinase"
                     /note="Ketohexokinase (fructokinase, KHK) catalyzes the
                     phosphorylation of fructose to fructose-1-phosphate (F1P),
                     the first step in the metabolism of dietary fructose. KHK
                     can also phosphorylate several other furanose sugars. It
                     is found in higher eukaryotes...; cd01939"
                     /db_xref="CDD:238914"
     Site            order(45,300,303)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238914"
     CDS             1..360
                     /gene="KHK"
                     /coded_by="XM_061155015.1:444..1526"
                     /db_xref="GeneID:133064646"
ORIGIN      
        1 meekqilcvg lvvldiinvm dkypeedtds rclsqrwqrg gnasnsctvl sllgapcafm
       61 gslapghvad fvlddlrrys vdlrymvfqt tgsvpistvi iseasgsrti lhaysflvad
      121 frqrgvdvsq vawqsrgetp csccivnnsn gsrtivlydt nlpdvsakdf ekveltrfkw
      181 ihiegrnase qvkmlqrieq hnarqppegk iqvsvevekp reelyqlfgy gdvvfvskdv
      241 akhfgfrsae ealrglfsrv rkgatlvcaw aeegadalgp dgrllhsdaf ppprvvdtlg
      301 agdtfnaavi fslsqdpahk ghtadlcwek pscrqeplpa ptplalpapq rsacpshsrm
//
LOCUS       XP_061010999             343 aa            linear   MAM 02-DEC-2023
DEFINITION  ketohexokinase isoform X8 [Dama dama].
ACCESSION   XP_061010999
VERSION     XP_061010999.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155016.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..343
                     /product="ketohexokinase isoform X8"
                     /calculated_mol_wt=37619
     Region          5..340
                     /region_name="Ketohexokinase"
                     /note="Ketohexokinase (fructokinase, KHK) catalyzes the
                     phosphorylation of fructose to fructose-1-phosphate (F1P),
                     the first step in the metabolism of dietary fructose. KHK
                     can also phosphorylate several other furanose sugars. It
                     is found in higher eukaryotes...; cd01939"
                     /db_xref="CDD:238914"
     Site            order(45,300,303)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238914"
     Site            order(237,269,298,301..302,305,327,330)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:238914"
     CDS             1..343
                     /gene="KHK"
                     /coded_by="XM_061155016.1:430..1461"
                     /db_xref="GeneID:133064646"
ORIGIN      
        1 meekqilcvg lvvldiinvm dkypeedtds rclsqrwqrg gnasnsctvl sllgapcafm
       61 gslapghvad fvlddlrrys vdlrymvfqt tgsvpistvi iseasgsrti lhaysflvad
      121 frqrgvdvsq vawqsrgetp csccivnnsn gsrtivlydt nlpdvsakdf ekveltrfkw
      181 ihiegrnase qvkmlqrieq hnarqppegk iqvsvevekp reelyqlfgy gdvvfvskdv
      241 akhfgfrsae ealrglfsrv rkgatlvcaw aeegadalgp dgrllhsdaf ppprvvdtlg
      301 agdtfnaavi fslsqgksmq ealrfgcqva gkkcglqgfd giv
//
LOCUS       XP_061011000             326 aa            linear   MAM 02-DEC-2023
DEFINITION  ketohexokinase isoform X9 [Dama dama].
ACCESSION   XP_061011000
VERSION     XP_061011000.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155017.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..326
                     /product="ketohexokinase isoform X9"
                     /calculated_mol_wt=35901
     Region          5..323
                     /region_name="Ketohexokinase"
                     /note="Ketohexokinase (fructokinase, KHK) catalyzes the
                     phosphorylation of fructose to fructose-1-phosphate (F1P),
                     the first step in the metabolism of dietary fructose. KHK
                     can also phosphorylate several other furanose sugars. It
                     is found in higher eukaryotes...; cd01939"
                     /db_xref="CDD:238914"
     Site            order(45,300,303)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238914"
     CDS             1..326
                     /gene="KHK"
                     /coded_by="XM_061155017.1:437..1417"
                     /db_xref="GeneID:133064646"
ORIGIN      
        1 meekqilcvg lvvldiinvm dkypeedtds rclsqrwqrg gnasnsctvl sllgapcafm
       61 gslapghvad fvlddlrrys vdlrymvfqt tgsvpistvi iseasgsrti lhaysflvad
      121 frqrgvdvsq vawqsrgetp csccivnnsn gsrtivlydt nlpdvsakdf ekveltrfkw
      181 ihiegrnase qvkmlqrieq hnarqppegk iqvsvevekp reelyqlfgy gdvvfvskdv
      241 akhfgfrsae ealrglfsrv rkgatlvcaw aeegadalgp dgrllhsdaf ppprvvdtlg
      301 agdtfnaavi fslsqgsalr qekppq
//
LOCUS       XP_061011001             316 aa            linear   MAM 02-DEC-2023
DEFINITION  ketohexokinase isoform X10 [Dama dama].
ACCESSION   XP_061011001
VERSION     XP_061011001.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155018.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..316
                     /product="ketohexokinase isoform X10"
                     /calculated_mol_wt=34824
     Region          5..226
                     /region_name="Ketohexokinase"
                     /note="Ketohexokinase (fructokinase, KHK) catalyzes the
                     phosphorylation of fructose to fructose-1-phosphate (F1P),
                     the first step in the metabolism of dietary fructose. KHK
                     can also phosphorylate several other furanose sugars. It
                     is found in higher eukaryotes...; cd01939"
                     /db_xref="CDD:238914"
     Site            order(45,210,213)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238914"
     CDS             1..316
                     /gene="KHK"
                     /coded_by="XM_061155018.1:493..1443"
                     /db_xref="GeneID:133064646"
ORIGIN      
        1 meekqilcvg lvvldiinvm dkypeedtds rclsqrwqrg gnasnsctvl sllgapcafm
       61 gslapghvae nlpdvsakdf ekveltrfkw ihiegrnase qvkmlqrieq hnarqppegk
      121 iqvsvevekp reelyqlfgy gdvvfvskdv akhfgfrsae ealrglfsrv rkgatlvcaw
      181 aeegadalgp dgrllhsdaf ppprvvdtlg agdtfnaavi fslsqgdpgs ipglgrspge
      241 gkstpvfwpg efhgpygvak nrtrlsnfhf hlgyvtefhl pqfphlsngd hsawsynyae
      301 deitiykmps mmpgvh
//
LOCUS       XP_061011002             298 aa            linear   MAM 02-DEC-2023
DEFINITION  ketohexokinase isoform X11 [Dama dama].
ACCESSION   XP_061011002
VERSION     XP_061011002.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155019.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..298
                     /product="ketohexokinase isoform X11"
                     /calculated_mol_wt=32571
     Region          5..295
                     /region_name="Ketohexokinase"
                     /note="Ketohexokinase (fructokinase, KHK) catalyzes the
                     phosphorylation of fructose to fructose-1-phosphate (F1P),
                     the first step in the metabolism of dietary fructose. KHK
                     can also phosphorylate several other furanose sugars. It
                     is found in higher eukaryotes...; cd01939"
                     /db_xref="CDD:238914"
     Site            order(45,255,258)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238914"
     Site            order(192,224,253,256..257,260,282,285)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:238914"
     CDS             1..298
                     /gene="KHK"
                     /coded_by="XM_061155019.1:418..1314"
                     /db_xref="GeneID:133064646"
ORIGIN      
        1 meekqilcvg lvvldiinvm dkypeedtds rclsqrwqrg gnasnsctvl sllgapcafm
       61 gslapghvad flvadfrqrg vdvsqvawqs rgetpcscci vnnsngsrti vlydtnlpdv
      121 sakdfekvel trfkwihieg rnaseqvkml qrieqhnarq ppegkiqvsv evekpreely
      181 qlfgygdvvf vskdvakhfg frsaeealrg lfsrvrkgat lvcawaeega dalgpdgrll
      241 hsdafppprv vdtlgagdtf naavifslsq gksmqealrf gcqvagkkcg lqgfdgiv
//
LOCUS       XP_061011003             298 aa            linear   MAM 02-DEC-2023
DEFINITION  ketohexokinase isoform X12 [Dama dama].
ACCESSION   XP_061011003
VERSION     XP_061011003.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155020.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..298
                     /product="ketohexokinase isoform X12"
                     /calculated_mol_wt=32712
     Region          5..295
                     /region_name="Ketohexokinase"
                     /note="Ketohexokinase (fructokinase, KHK) catalyzes the
                     phosphorylation of fructose to fructose-1-phosphate (F1P),
                     the first step in the metabolism of dietary fructose. KHK
                     can also phosphorylate several other furanose sugars. It
                     is found in higher eukaryotes...; cd01939"
                     /db_xref="CDD:238914"
     Site            order(45,255,258)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238914"
     Site            order(192,224,253,256..257,260,282,285)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:238914"
     CDS             1..298
                     /gene="KHK"
                     /coded_by="XM_061155020.1:430..1326"
                     /db_xref="GeneID:133064646"
ORIGIN      
        1 meekqilcvg lvvldiinvm dkypeedtds rclsqrwqrg gnasnsctvl sllgapcafm
       61 gslapghvad fvlddlrrys vdlrymvfqt tgsvpistvi iseasgsrti lhayrnlpdv
      121 sakdfekvel trfkwihieg rnaseqvkml qrieqhnarq ppegkiqvsv evekpreely
      181 qlfgygdvvf vskdvakhfg frsaeealrg lfsrvrkgat lvcawaeega dalgpdgrll
      241 hsdafppprv vdtlgagdtf naavifslsq gksmqealrf gcqvagkkcg lqgfdgiv
//
LOCUS       XP_061011004             404 aa            linear   MAM 02-DEC-2023
DEFINITION  protein ABHD1 [Dama dama].
ACCESSION   XP_061011004
VERSION     XP_061011004.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155021.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..404
                     /product="protein ABHD1"
                     /calculated_mol_wt=44628
     Region          62..379
                     /region_name="YheT"
                     /note="Predicted hydrolase of the alpha/beta-hydrolase
                     fold [General function prediction only]; COG0429"
                     /db_xref="CDD:440198"
     CDS             1..404
                     /gene="ABHD1"
                     /coded_by="XM_061155021.1:43..1257"
                     /db_xref="GeneID:133064647"
ORIGIN      
        1 mlsssqspqd dtwtesfsll lglgaalylg yywtwvpqrp qlvtgsrfla fleqhcpvtl
       61 etfyptlwcf egrlqtifrv llqsrlvvpy ssevletpdg gqllldwasq snsqypdpst
      121 qptvlllpgi tgssqetyil hlvdqalkdg yravvfnnrg crgeellthr afcasntedl
      181 atvinhiksr ypqapllavg islggilvln hlartgraag lvaaltlsac wdsfettrsl
      241 etpmnsllfn hrltaglcqv isrnrkvmen vvnvdfvlqa rtirqfdery tavvfgyqdc
      301 aayyraaspr tkvnaiqipv lclnaaddpf spvdalplqa aqhslhvall vtargghigf
      361 legllpwqhc ymsrllhqya kaifqhpael pgprsptpse agks
//
LOCUS       XP_061011005            2242 aa            linear   MAM 02-DEC-2023
DEFINITION  CAD protein isoform X1 [Dama dama].
ACCESSION   XP_061011005
VERSION     XP_061011005.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155022.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2242
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2242
                     /product="CAD protein isoform X1"
                     /calculated_mol_wt=244840
     Region          1..355
                     /region_name="PRK12564"
                     /note="carbamoyl-phosphate synthase small subunit"
                     /db_xref="CDD:237139"
     Region          391..1440
                     /region_name="CPSaseII_lrg"
                     /note="carbamoyl-phosphate synthase, large subunit;
                     TIGR01369"
                     /db_xref="CDD:273581"
     Region          1460..1806
                     /region_name="CAD_DHOase"
                     /note="The eukaryotic CAD protein is a trifunctional
                     enzyme of carbamoylphosphate synthetase-aspartate
                     transcarbamoylase-dihydroorotase, which catalyzes the
                     first three steps of de novo pyrimidine nucleotide
                     biosynthesis. Dihydroorotase (DHOase) catalyzes the...;
                     cd01316"
                     /db_xref="CDD:238641"
     Site            order(1471,1473,1556,1590,1614,1686)
                     /site_type="active"
                     /db_xref="CDD:238641"
     Region          <1802..1934
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1936..2241
                     /region_name="PyrB"
                     /note="Aspartate carbamoyltransferase, catalytic subunit
                     [Nucleotide transport and metabolism]; COG0540"
                     /db_xref="CDD:440306"
     CDS             1..2242
                     /gene="CAD"
                     /coded_by="XM_061155022.1:194..6922"
                     /db_xref="GeneID:133064649"
ORIGIN      
        1 maalvledgs vlrgqpfgaa vstagevvfq tgmvgypeal tdpsykaqil vltypligny
       61 gippdevdef glskwfessg ihvaglvvge ccptpshwsa tctlhewlqq rgipglqgvd
      121 treltkklre qgsllgklvq dgtepstlpf ldpnarplvp evstkvprvf naggtprila
      181 ldcglkynqv rclcqrgaev tvvpwdhtld sqeyeglfls ngpgdpasyp slvstlsrvl
      241 sepnprpifg iclghqllal aigaktykmr ygnrghnqpc llvgsgrcfl tsqnhgfave
      301 tdslpaswlp lftnandhsn egivheslpf fsvqfhpehq agpsdmellf difletvkea
      361 tagnpggqtv rerlaerlcl pgiptpgsgl taprkvlilg sgglsigqag efdysgsqai
      421 kalkeeniqt llinpniatv qtsqgladkv yflpitphyv tqvirnerpd gvlltfggqt
      481 alncgveltk agvlarygvr vlgtpvetie ltedrrafas rmaeigehva pseaansleq
      541 aqaaaerlgy pvlvraayal gglgsgfasn keelsalvap afahtsqvlv dkslkgwkei
      601 eyevvrdayg ncvtvcnmen ldplgihtge sivvapsqtl ndreyqllrq taikvtqhlg
      661 ivgecnvqya lnpeseqyyi ievnarlsrs salaskatgy playvaakla lgiplpelrn
      721 svtggtaafe psldycvvki prwdlskflr vstkigscmk svgevmgigr sfeeafqkal
      781 rmvdencvgf dhtvkpvsdm eletptdkri fvvaaalwag ysvdrlyelt ridrwflhrm
      841 kriiahtqll eqhrgqplpp dllhqakrlg fsdkqialav lstelavrkl rqelgicpav
      901 kqidtvaaew paqtnylylt ywgtthdlsf rtphvlvlgs gvyrigssve fdwcavgciq
      961 qlrkmgykti mvnynpetvs tdydmcdrly fdeisfevvm diyelenpeg vilsmggqlp
     1021 nnmamalhrq qcrvlgtspe aidsaenrfk fsrlldtigi sqpqwrelsd lesarqfcqt
     1081 vgypcvvrps yvlsgaamnv aytdgdlerf lssaaavske hpvviskfiq eakeidvdav
     1141 acdgvvaaia isehvenagv hsgdatlvtp pqditaktle rikaivhavg qelqvtgpfn
     1201 lqliakddql kviecnvrvs rsfpfvsktl gvdlvalatr vimgeevepv glmtgsgvvg
     1261 vkvpqfsfsr lagadvvlgv emtstgevag fgesrceayl kamlstgfki pkknilltig
     1321 syknksellp tvrlleslgy slyaslgtad fytehgvkvt avdwhfeeav dgecppqrsi
     1381 leqlaeknfe lvinlsmrga ggrrlssfvt kgyrtrrlaa dfsvpliidi kctklfveal
     1441 gqigpapplk vhvdcmtsqk lvrlpglidv hvhlrepggt hkedfasgta aalaggvtmv
     1501 campntrppi tdapalalaq klaeagarcd yalflgasse nagtlgtvag saaglklyln
     1561 etfselrlds vvqwmehfet wpshlpivah aerqsvaail mvaqltqrsv hichvarkee
     1621 illikaakaq glpvtcevap hhlflsrddl erlgrgkgev rpelgsredv ealwenmavi
     1681 dcfasdhaph tmeekcgprp ppgfpgletm lpllltavse grlslddvlq rlhhnprrif
     1741 hlppqedtyv evdlehewtv pshmpfskah wtpfegqkvk gtvrrvvlrg evayidgqvl
     1801 vppgygqdvr kwpqgavpql tpsapaasel tttperprrs gpalpdgrfh lpprihrasd
     1861 pglpavflrp gagtpwgsra waeepkekts rkaaepelmg tldgicyppp pvprqaspqn
     1921 lgtpgllhpq tspllhslvg qhilsvqqft kdqmshlfnv ahtlrmmvqk ersldilkgk
     1981 vmasmfyevs trtsssfaaa marlggavls fseatssvqk gesladsvqt mscyadvvvl
     2041 rhpqpgavel aakhcrrpvi nagdgvgehp tqalldifti reelgtvngm titmvgdlkh
     2101 grtvhslacl ltqyrvslry vappslrmpp dvrafvasrg tkqeefesie ealpdtdvly
     2161 mtriqkerfg stqeyeacfg qfiltphimt rakkkmvvmh pmprvneisv evdsdpraay
     2221 frqaengmyi rmallatvlg rf
//
LOCUS       XP_061011006            2225 aa            linear   MAM 02-DEC-2023
DEFINITION  CAD protein isoform X2 [Dama dama].
ACCESSION   XP_061011006
VERSION     XP_061011006.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155023.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2225
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2225
                     /product="CAD protein isoform X2"
                     /calculated_mol_wt=243029
     Region          1..355
                     /region_name="PRK12564"
                     /note="carbamoyl-phosphate synthase small subunit"
                     /db_xref="CDD:237139"
     Region          391..1440
                     /region_name="CPSaseII_lrg"
                     /note="carbamoyl-phosphate synthase, large subunit;
                     TIGR01369"
                     /db_xref="CDD:273581"
     Region          1460..1806
                     /region_name="CAD_DHOase"
                     /note="The eukaryotic CAD protein is a trifunctional
                     enzyme of carbamoylphosphate synthetase-aspartate
                     transcarbamoylase-dihydroorotase, which catalyzes the
                     first three steps of de novo pyrimidine nucleotide
                     biosynthesis. Dihydroorotase (DHOase) catalyzes the...;
                     cd01316"
                     /db_xref="CDD:238641"
     Site            order(1471,1473,1556,1590,1614,1686)
                     /site_type="active"
                     /db_xref="CDD:238641"
     Region          1919..2224
                     /region_name="PyrB"
                     /note="Aspartate carbamoyltransferase, catalytic subunit
                     [Nucleotide transport and metabolism]; COG0540"
                     /db_xref="CDD:440306"
     CDS             1..2225
                     /gene="CAD"
                     /coded_by="XM_061155023.1:194..6871"
                     /db_xref="GeneID:133064649"
ORIGIN      
        1 maalvledgs vlrgqpfgaa vstagevvfq tgmvgypeal tdpsykaqil vltypligny
       61 gippdevdef glskwfessg ihvaglvvge ccptpshwsa tctlhewlqq rgipglqgvd
      121 treltkklre qgsllgklvq dgtepstlpf ldpnarplvp evstkvprvf naggtprila
      181 ldcglkynqv rclcqrgaev tvvpwdhtld sqeyeglfls ngpgdpasyp slvstlsrvl
      241 sepnprpifg iclghqllal aigaktykmr ygnrghnqpc llvgsgrcfl tsqnhgfave
      301 tdslpaswlp lftnandhsn egivheslpf fsvqfhpehq agpsdmellf difletvkea
      361 tagnpggqtv rerlaerlcl pgiptpgsgl taprkvlilg sgglsigqag efdysgsqai
      421 kalkeeniqt llinpniatv qtsqgladkv yflpitphyv tqvirnerpd gvlltfggqt
      481 alncgveltk agvlarygvr vlgtpvetie ltedrrafas rmaeigehva pseaansleq
      541 aqaaaerlgy pvlvraayal gglgsgfasn keelsalvap afahtsqvlv dkslkgwkei
      601 eyevvrdayg ncvtvcnmen ldplgihtge sivvapsqtl ndreyqllrq taikvtqhlg
      661 ivgecnvqya lnpeseqyyi ievnarlsrs salaskatgy playvaakla lgiplpelrn
      721 svtggtaafe psldycvvki prwdlskflr vstkigscmk svgevmgigr sfeeafqkal
      781 rmvdencvgf dhtvkpvsdm eletptdkri fvvaaalwag ysvdrlyelt ridrwflhrm
      841 kriiahtqll eqhrgqplpp dllhqakrlg fsdkqialav lstelavrkl rqelgicpav
      901 kqidtvaaew paqtnylylt ywgtthdlsf rtphvlvlgs gvyrigssve fdwcavgciq
      961 qlrkmgykti mvnynpetvs tdydmcdrly fdeisfevvm diyelenpeg vilsmggqlp
     1021 nnmamalhrq qcrvlgtspe aidsaenrfk fsrlldtigi sqpqwrelsd lesarqfcqt
     1081 vgypcvvrps yvlsgaamnv aytdgdlerf lssaaavske hpvviskfiq eakeidvdav
     1141 acdgvvaaia isehvenagv hsgdatlvtp pqditaktle rikaivhavg qelqvtgpfn
     1201 lqliakddql kviecnvrvs rsfpfvsktl gvdlvalatr vimgeevepv glmtgsgvvg
     1261 vkvpqfsfsr lagadvvlgv emtstgevag fgesrceayl kamlstgfki pkknilltig
     1321 syknksellp tvrlleslgy slyaslgtad fytehgvkvt avdwhfeeav dgecppqrsi
     1381 leqlaeknfe lvinlsmrga ggrrlssfvt kgyrtrrlaa dfsvpliidi kctklfveal
     1441 gqigpapplk vhvdcmtsqk lvrlpglidv hvhlrepggt hkedfasgta aalaggvtmv
     1501 campntrppi tdapalalaq klaeagarcd yalflgasse nagtlgtvag saaglklyln
     1561 etfselrlds vvqwmehfet wpshlpivah aerqsvaail mvaqltqrsv hichvarkee
     1621 illikaakaq glpvtcevap hhlflsrddl erlgrgkgev rpelgsredv ealwenmavi
     1681 dcfasdhaph tmeekcgprp ppgfpgletm lpllltavse grlslddvlq rlhhnprrif
     1741 hlppqedtyv evdlehewtv pshmpfskah wtpfegqkvk gtvrrvvlrg evayidgqvl
     1801 vppgygqdvr kwpqgavpql tpsapaasel tttperprrs gpalpdgrfh lpprihrasd
     1861 pglpaeepke ktsrkaaepe lmgtldgicy ppppvprqas pqnlgtpgll hpqtspllhs
     1921 lvgqhilsvq qftkdqmshl fnvahtlrmm vqkersldil kgkvmasmfy evstrtsssf
     1981 aaamarlgga vlsfseatss vqkgeslads vqtmscyadv vvlrhpqpga velaakhcrr
     2041 pvinagdgvg ehptqalldi ftireelgtv ngmtitmvgd lkhgrtvhsl aclltqyrvs
     2101 lryvappslr mppdvrafva srgtkqeefe sieealpdtd vlymtriqke rfgstqeyea
     2161 cfgqfiltph imtrakkkmv vmhpmprvne isvevdsdpr aayfrqaeng myirmallat
     2221 vlgrf
//
LOCUS       XP_061011007            2181 aa            linear   MAM 02-DEC-2023
DEFINITION  CAD protein isoform X3 [Dama dama].
ACCESSION   XP_061011007
VERSION     XP_061011007.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155024.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2181
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2181
                     /product="CAD protein isoform X3"
                     /calculated_mol_wt=238263
     Region          1..355
                     /region_name="PRK12564"
                     /note="carbamoyl-phosphate synthase small subunit"
                     /db_xref="CDD:237139"
     Region          391..1379
                     /region_name="CPSaseII_lrg"
                     /note="carbamoyl-phosphate synthase, large subunit;
                     TIGR01369"
                     /db_xref="CDD:273581"
     Region          1399..1745
                     /region_name="CAD_DHOase"
                     /note="The eukaryotic CAD protein is a trifunctional
                     enzyme of carbamoylphosphate synthetase-aspartate
                     transcarbamoylase-dihydroorotase, which catalyzes the
                     first three steps of de novo pyrimidine nucleotide
                     biosynthesis. Dihydroorotase (DHOase) catalyzes the...;
                     cd01316"
                     /db_xref="CDD:238641"
     Site            order(1410,1412,1495,1529,1553,1625)
                     /site_type="active"
                     /db_xref="CDD:238641"
     Region          <1741..1873
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1875..2180
                     /region_name="PyrB"
                     /note="Aspartate carbamoyltransferase, catalytic subunit
                     [Nucleotide transport and metabolism]; COG0540"
                     /db_xref="CDD:440306"
     CDS             1..2181
                     /gene="CAD"
                     /coded_by="XM_061155024.1:194..6739"
                     /db_xref="GeneID:133064649"
ORIGIN      
        1 maalvledgs vlrgqpfgaa vstagevvfq tgmvgypeal tdpsykaqil vltypligny
       61 gippdevdef glskwfessg ihvaglvvge ccptpshwsa tctlhewlqq rgipglqgvd
      121 treltkklre qgsllgklvq dgtepstlpf ldpnarplvp evstkvprvf naggtprila
      181 ldcglkynqv rclcqrgaev tvvpwdhtld sqeyeglfls ngpgdpasyp slvstlsrvl
      241 sepnprpifg iclghqllal aigaktykmr ygnrghnqpc llvgsgrcfl tsqnhgfave
      301 tdslpaswlp lftnandhsn egivheslpf fsvqfhpehq agpsdmellf difletvkea
      361 tagnpggqtv rerlaerlcl pgiptpgsgl taprkvlilg sgglsigqag efdysgsqai
      421 kalkeeniqt llinpniatv qtsqgladkv yflpitphyv tqvirnerpd gvlltfggqt
      481 alncgveltk agvlarygvr vlgtpvetie ltedrrafas rmaeigehva pseaansleq
      541 aqaaaerlgy pvlvraayal gglgsgfasn keelsalvap afahtsqvlv dkslkgwkei
      601 eyevvrdayg ncvtvcnmen ldplgihtge sivvapsqtl ndreyqllrq taikvtqhlg
      661 ivgecnvqya lnpeseqyyi ievnarlsrs salaskatgy playvaakla lgiplpelrn
      721 svtggtaafe psldycvvki prwdlskflr vstkigscmk svgevmgigr sfeeafqkal
      781 rmvdencvgf dhtvkpvsdm eletptdkri fvvaaalwag ysvdrlyelt ridrwflhrm
      841 kriiahtqll eqhrgqplpp dllhqakrlg fsdkqialav lstelavrkl rqelgicpav
      901 kqidtvaaew paqtnylylt ywgtthdlsf rtphvlvlgs gvyrigssve fdwcavgciq
      961 qlrkmgykti mvnynpetvs tdydmcdrly fdeisfevvm diyelenpeg vilsmggqlp
     1021 nnmamalhrq qcrvlgtspe aidsaenrfk fsrlldtigi sqpqwrelsd leeidvdava
     1081 cdgvvaaiai sehvenagvh sgdatlvtpp qditaktler ikaivhavgq elqvtgpfnl
     1141 qliakddqlk viecnvrvsr sfpfvsktlg vdlvalatrv imgeevepvg lmtgsgvvgv
     1201 kvpqfsfsrl agadvvlgve mtstgevagf gesrceaylk amlstgfkip kknilltigs
     1261 yknksellpt vrlleslgys lyaslgtadf ytehgvkvta vdwhfeeavd gecppqrsil
     1321 eqlaeknfel vinlsmrgag grrlssfvtk gyrtrrlaad fsvpliidik ctklfvealg
     1381 qigpapplkv hvdcmtsqkl vrlpglidvh vhlrepggth kedfasgtaa alaggvtmvc
     1441 ampntrppit dapalalaqk laeagarcdy alflgassen agtlgtvags aaglklylne
     1501 tfselrldsv vqwmehfetw pshlpivaha erqsvaailm vaqltqrsvh ichvarkeei
     1561 llikaakaqg lpvtcevaph hlflsrddle rlgrgkgevr pelgsredve alwenmavid
     1621 cfasdhapht meekcgprpp pgfpgletml pllltavseg rlslddvlqr lhhnprrifh
     1681 lppqedtyve vdlehewtvp shmpfskahw tpfegqkvkg tvrrvvlrge vayidgqvlv
     1741 ppgygqdvrk wpqgavpqlt psapaaselt ttperprrsg palpdgrfhl pprihrasdp
     1801 glpavflrpg agtpwgsraw aeepkektsr kaaepelmgt ldgicypppp vprqaspqnl
     1861 gtpgllhpqt spllhslvgq hilsvqqftk dqmshlfnva htlrmmvqke rsldilkgkv
     1921 masmfyevst rtsssfaaam arlggavlsf seatssvqkg esladsvqtm scyadvvvlr
     1981 hpqpgavela akhcrrpvin agdgvgehpt qalldiftir eelgtvngmt itmvgdlkhg
     2041 rtvhslacll tqyrvslryv appslrmppd vrafvasrgt kqeefesiee alpdtdvlym
     2101 triqkerfgs tqeyeacfgq filtphimtr akkkmvvmhp mprvneisve vdsdpraayf
     2161 rqaengmyir mallatvlgr f
//
LOCUS       XP_061011008            1901 aa            linear   MAM 02-DEC-2023
DEFINITION  CAD protein isoform X4 [Dama dama].
ACCESSION   XP_061011008
VERSION     XP_061011008.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155025.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1901
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1901
                     /product="CAD protein isoform X4"
                     /calculated_mol_wt=207262
     Region          1..355
                     /region_name="PRK12564"
                     /note="carbamoyl-phosphate synthase small subunit"
                     /db_xref="CDD:237139"
     Region          391..1440
                     /region_name="CPSaseII_lrg"
                     /note="carbamoyl-phosphate synthase, large subunit;
                     TIGR01369"
                     /db_xref="CDD:273581"
     Region          1460..1806
                     /region_name="CAD_DHOase"
                     /note="The eukaryotic CAD protein is a trifunctional
                     enzyme of carbamoylphosphate synthetase-aspartate
                     transcarbamoylase-dihydroorotase, which catalyzes the
                     first three steps of de novo pyrimidine nucleotide
                     biosynthesis. Dihydroorotase (DHOase) catalyzes the...;
                     cd01316"
                     /db_xref="CDD:238641"
     Site            order(1471,1473,1556,1590,1614,1686)
                     /site_type="active"
                     /db_xref="CDD:238641"
     CDS             1..1901
                     /gene="CAD"
                     /coded_by="XM_061155025.1:195..5900"
                     /db_xref="GeneID:133064649"
ORIGIN      
        1 maalvledgs vlrgqpfgaa vstagevvfq tgmvgypeal tdpsykaqil vltypligny
       61 gippdevdef glskwfessg ihvaglvvge ccptpshwsa tctlhewlqq rgipglqgvd
      121 treltkklre qgsllgklvq dgtepstlpf ldpnarplvp evstkvprvf naggtprila
      181 ldcglkynqv rclcqrgaev tvvpwdhtld sqeyeglfls ngpgdpasyp slvstlsrvl
      241 sepnprpifg iclghqllal aigaktykmr ygnrghnqpc llvgsgrcfl tsqnhgfave
      301 tdslpaswlp lftnandhsn egivheslpf fsvqfhpehq agpsdmellf difletvkea
      361 tagnpggqtv rerlaerlcl pgiptpgsgl taprkvlilg sgglsigqag efdysgsqai
      421 kalkeeniqt llinpniatv qtsqgladkv yflpitphyv tqvirnerpd gvlltfggqt
      481 alncgveltk agvlarygvr vlgtpvetie ltedrrafas rmaeigehva pseaansleq
      541 aqaaaerlgy pvlvraayal gglgsgfasn keelsalvap afahtsqvlv dkslkgwkei
      601 eyevvrdayg ncvtvcnmen ldplgihtge sivvapsqtl ndreyqllrq taikvtqhlg
      661 ivgecnvqya lnpeseqyyi ievnarlsrs salaskatgy playvaakla lgiplpelrn
      721 svtggtaafe psldycvvki prwdlskflr vstkigscmk svgevmgigr sfeeafqkal
      781 rmvdencvgf dhtvkpvsdm eletptdkri fvvaaalwag ysvdrlyelt ridrwflhrm
      841 kriiahtqll eqhrgqplpp dllhqakrlg fsdkqialav lstelavrkl rqelgicpav
      901 kqidtvaaew paqtnylylt ywgtthdlsf rtphvlvlgs gvyrigssve fdwcavgciq
      961 qlrkmgykti mvnynpetvs tdydmcdrly fdeisfevvm diyelenpeg vilsmggqlp
     1021 nnmamalhrq qcrvlgtspe aidsaenrfk fsrlldtigi sqpqwrelsd lesarqfcqt
     1081 vgypcvvrps yvlsgaamnv aytdgdlerf lssaaavske hpvviskfiq eakeidvdav
     1141 acdgvvaaia isehvenagv hsgdatlvtp pqditaktle rikaivhavg qelqvtgpfn
     1201 lqliakddql kviecnvrvs rsfpfvsktl gvdlvalatr vimgeevepv glmtgsgvvg
     1261 vkvpqfsfsr lagadvvlgv emtstgevag fgesrceayl kamlstgfki pkknilltig
     1321 syknksellp tvrlleslgy slyaslgtad fytehgvkvt avdwhfeeav dgecppqrsi
     1381 leqlaeknfe lvinlsmrga ggrrlssfvt kgyrtrrlaa dfsvpliidi kctklfveal
     1441 gqigpapplk vhvdcmtsqk lvrlpglidv hvhlrepggt hkedfasgta aalaggvtmv
     1501 campntrppi tdapalalaq klaeagarcd yalflgasse nagtlgtvag saaglklyln
     1561 etfselrlds vvqwmehfet wpshlpivah aerqsvaail mvaqltqrsv hichvarkee
     1621 illikaakaq glpvtcevap hhlflsrddl erlgrgkgev rpelgsredv ealwenmavi
     1681 dcfasdhaph tmeekcgprp ppgfpgletm lpllltavse grlslddvlq rlhhnprrif
     1741 hlppqedtyv evdlehewtv pshmpfskah wtpfegqkvk gtvrrvvlrg evayidgqvl
     1801 vppgygqdvr kwpqgavpql tpsapaasel tttperprrs gpalpdgrfh lpprihrasd
     1861 pglpavflrp gagtpwgsra wgkiqlrsqr rrppgrqlsq s
//
LOCUS       XP_061011009             638 aa            linear   MAM 02-DEC-2023
DEFINITION  sodium-dependent multivitamin transporter isoform X1 [Dama dama].
ACCESSION   XP_061011009
VERSION     XP_061011009.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155026.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..638
                     /product="sodium-dependent multivitamin transporter
                     isoform X1"
                     /calculated_mol_wt=68667
     Region          24..550
                     /region_name="SLC5sbd_SMVT"
                     /note="Na(+)/multivitamin cotransporter SMVT and related
                     proteins; solute-binding domain; cd11504"
                     /db_xref="CDD:271394"
     Site            order(77,80,362,365..366)
                     /site_type="other"
                     /note="Na binding site [ion binding]"
                     /db_xref="CDD:271394"
     CDS             1..638
                     /gene="SLC5A6"
                     /coded_by="XM_061155026.1:423..2339"
                     /db_xref="GeneID:133064650"
ORIGIN      
        1 msvgmstatp lpptsdtnvv tstfslvdyv vfalllvlsl aiglyhayrg wgrhsigqll
       61 ladrkmgclp valsllatfq savailgvps eiyrfgtqyw flgccyflgl lipahvfipi
      121 fyrlhitsay eylelrfska vrvcgtvtfi fqmviymgvv lyapslalna vtgfdlwlsv
      181 ltlgivctiy talgglkavi wtdvfqtlvm flgqlaviiv gsakvgglgh vwevasqhgl
      241 isgieldpdp fvrhtfwtla fggvfmmlsl ygvnqaqvqr ylssrtekaa vlscyavfpc
      301 qqvslsmgcl iglvmftyyq eypmstqqsq aapdqfvlyf vmdllrglpg lpglfvaclf
      361 sgslstissa fnslatvtme dlirpwfphf sevratmlsr iiafgygllc lgmayissqm
      421 gpvlqaaisi fgmvggpllg lfclgmffpc anppgaivgl lagltmafwi gigsivtsmg
      481 sgrppsppng ssfslssnlt avtmatlips taaskptglq rlyslsylwy sahnsttviv
      541 vglavsllsg gmrgrtvdpr tiypvlpkll allpvscqkr lpcracsqdv sseatmfpek
      601 msngmlrgsr dqeamavpee gpaqpgispt filqetsl
//
LOCUS       XP_061011010             638 aa            linear   MAM 02-DEC-2023
DEFINITION  sodium-dependent multivitamin transporter isoform X1 [Dama dama].
ACCESSION   XP_061011010
VERSION     XP_061011010.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155027.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..638
                     /product="sodium-dependent multivitamin transporter
                     isoform X1"
                     /calculated_mol_wt=68667
     Region          24..550
                     /region_name="SLC5sbd_SMVT"
                     /note="Na(+)/multivitamin cotransporter SMVT and related
                     proteins; solute-binding domain; cd11504"
                     /db_xref="CDD:271394"
     Site            order(77,80,362,365..366)
                     /site_type="other"
                     /note="Na binding site [ion binding]"
                     /db_xref="CDD:271394"
     CDS             1..638
                     /gene="SLC5A6"
                     /coded_by="XM_061155027.1:474..2390"
                     /db_xref="GeneID:133064650"
ORIGIN      
        1 msvgmstatp lpptsdtnvv tstfslvdyv vfalllvlsl aiglyhayrg wgrhsigqll
       61 ladrkmgclp valsllatfq savailgvps eiyrfgtqyw flgccyflgl lipahvfipi
      121 fyrlhitsay eylelrfska vrvcgtvtfi fqmviymgvv lyapslalna vtgfdlwlsv
      181 ltlgivctiy talgglkavi wtdvfqtlvm flgqlaviiv gsakvgglgh vwevasqhgl
      241 isgieldpdp fvrhtfwtla fggvfmmlsl ygvnqaqvqr ylssrtekaa vlscyavfpc
      301 qqvslsmgcl iglvmftyyq eypmstqqsq aapdqfvlyf vmdllrglpg lpglfvaclf
      361 sgslstissa fnslatvtme dlirpwfphf sevratmlsr iiafgygllc lgmayissqm
      421 gpvlqaaisi fgmvggpllg lfclgmffpc anppgaivgl lagltmafwi gigsivtsmg
      481 sgrppsppng ssfslssnlt avtmatlips taaskptglq rlyslsylwy sahnsttviv
      541 vglavsllsg gmrgrtvdpr tiypvlpkll allpvscqkr lpcracsqdv sseatmfpek
      601 msngmlrgsr dqeamavpee gpaqpgispt filqetsl
//
LOCUS       XP_061011011             638 aa            linear   MAM 02-DEC-2023
DEFINITION  sodium-dependent multivitamin transporter isoform X1 [Dama dama].
ACCESSION   XP_061011011
VERSION     XP_061011011.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155028.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..638
                     /product="sodium-dependent multivitamin transporter
                     isoform X1"
                     /calculated_mol_wt=68667
     Region          24..550
                     /region_name="SLC5sbd_SMVT"
                     /note="Na(+)/multivitamin cotransporter SMVT and related
                     proteins; solute-binding domain; cd11504"
                     /db_xref="CDD:271394"
     Site            order(77,80,362,365..366)
                     /site_type="other"
                     /note="Na binding site [ion binding]"
                     /db_xref="CDD:271394"
     CDS             1..638
                     /gene="SLC5A6"
                     /coded_by="XM_061155028.1:460..2376"
                     /db_xref="GeneID:133064650"
ORIGIN      
        1 msvgmstatp lpptsdtnvv tstfslvdyv vfalllvlsl aiglyhayrg wgrhsigqll
       61 ladrkmgclp valsllatfq savailgvps eiyrfgtqyw flgccyflgl lipahvfipi
      121 fyrlhitsay eylelrfska vrvcgtvtfi fqmviymgvv lyapslalna vtgfdlwlsv
      181 ltlgivctiy talgglkavi wtdvfqtlvm flgqlaviiv gsakvgglgh vwevasqhgl
      241 isgieldpdp fvrhtfwtla fggvfmmlsl ygvnqaqvqr ylssrtekaa vlscyavfpc
      301 qqvslsmgcl iglvmftyyq eypmstqqsq aapdqfvlyf vmdllrglpg lpglfvaclf
      361 sgslstissa fnslatvtme dlirpwfphf sevratmlsr iiafgygllc lgmayissqm
      421 gpvlqaaisi fgmvggpllg lfclgmffpc anppgaivgl lagltmafwi gigsivtsmg
      481 sgrppsppng ssfslssnlt avtmatlips taaskptglq rlyslsylwy sahnsttviv
      541 vglavsllsg gmrgrtvdpr tiypvlpkll allpvscqkr lpcracsqdv sseatmfpek
      601 msngmlrgsr dqeamavpee gpaqpgispt filqetsl
//
LOCUS       XP_061011012             638 aa            linear   MAM 02-DEC-2023
DEFINITION  sodium-dependent multivitamin transporter isoform X1 [Dama dama].
ACCESSION   XP_061011012
VERSION     XP_061011012.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155029.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..638
                     /product="sodium-dependent multivitamin transporter
                     isoform X1"
                     /calculated_mol_wt=68667
     Region          24..550
                     /region_name="SLC5sbd_SMVT"
                     /note="Na(+)/multivitamin cotransporter SMVT and related
                     proteins; solute-binding domain; cd11504"
                     /db_xref="CDD:271394"
     Site            order(77,80,362,365..366)
                     /site_type="other"
                     /note="Na binding site [ion binding]"
                     /db_xref="CDD:271394"
     CDS             1..638
                     /gene="SLC5A6"
                     /coded_by="XM_061155029.1:457..2373"
                     /db_xref="GeneID:133064650"
ORIGIN      
        1 msvgmstatp lpptsdtnvv tstfslvdyv vfalllvlsl aiglyhayrg wgrhsigqll
       61 ladrkmgclp valsllatfq savailgvps eiyrfgtqyw flgccyflgl lipahvfipi
      121 fyrlhitsay eylelrfska vrvcgtvtfi fqmviymgvv lyapslalna vtgfdlwlsv
      181 ltlgivctiy talgglkavi wtdvfqtlvm flgqlaviiv gsakvgglgh vwevasqhgl
      241 isgieldpdp fvrhtfwtla fggvfmmlsl ygvnqaqvqr ylssrtekaa vlscyavfpc
      301 qqvslsmgcl iglvmftyyq eypmstqqsq aapdqfvlyf vmdllrglpg lpglfvaclf
      361 sgslstissa fnslatvtme dlirpwfphf sevratmlsr iiafgygllc lgmayissqm
      421 gpvlqaaisi fgmvggpllg lfclgmffpc anppgaivgl lagltmafwi gigsivtsmg
      481 sgrppsppng ssfslssnlt avtmatlips taaskptglq rlyslsylwy sahnsttviv
      541 vglavsllsg gmrgrtvdpr tiypvlpkll allpvscqkr lpcracsqdv sseatmfpek
      601 msngmlrgsr dqeamavpee gpaqpgispt filqetsl
//
LOCUS       XP_061011013             598 aa            linear   MAM 02-DEC-2023
DEFINITION  sodium-dependent multivitamin transporter isoform X2 [Dama dama].
ACCESSION   XP_061011013
VERSION     XP_061011013.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155030.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..598
                     /product="sodium-dependent multivitamin transporter
                     isoform X2"
                     /calculated_mol_wt=64410
     Region          24..510
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
     Site            order(77,80,322,325..326)
                     /site_type="other"
                     /note="Na binding site [ion binding]"
                     /db_xref="CDD:271356"
     CDS             1..598
                     /gene="SLC5A6"
                     /coded_by="XM_061155030.1:423..2219"
                     /db_xref="GeneID:133064650"
ORIGIN      
        1 msvgmstatp lpptsdtnvv tstfslvdyv vfalllvlsl aiglyhayrg wgrhsigqll
       61 ladrkmgclp valsllatfq savailgvps eiyrfgtqyw flgccyflgl lipahvfipi
      121 fyrlhitsay eylelrfska vrvcgtvtfi fqmgglkavi wtdvfqtlvm flgqlaviiv
      181 gsakvgglgh vwevasqhgl isgieldpdp fvrhtfwtla fggvfmmlsl ygvnqaqvqr
      241 ylssrtekaa vlscyavfpc qqvslsmgcl iglvmftyyq eypmstqqsq aapdqfvlyf
      301 vmdllrglpg lpglfvaclf sgslstissa fnslatvtme dlirpwfphf sevratmlsr
      361 iiafgygllc lgmayissqm gpvlqaaisi fgmvggpllg lfclgmffpc anppgaivgl
      421 lagltmafwi gigsivtsmg sgrppsppng ssfslssnlt avtmatlips taaskptglq
      481 rlyslsylwy sahnsttviv vglavsllsg gmrgrtvdpr tiypvlpkll allpvscqkr
      541 lpcracsqdv sseatmfpek msngmlrgsr dqeamavpee gpaqpgispt filqetsl
//
LOCUS       XP_061011014             229 aa            linear   MAM 02-DEC-2023
DEFINITION  all-trans retinoic acid-induced differentiation factor [Dama dama].
ACCESSION   XP_061011014
VERSION     XP_061011014.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155031.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..229
                     /product="all-trans retinoic acid-induced differentiation
                     factor"
                     /calculated_mol_wt=24505
     CDS             1..229
                     /gene="ATRAID"
                     /coded_by="XM_061155031.1:56..745"
                     /db_xref="GeneID:133064651"
ORIGIN      
        1 mvlcglgspv slvpwaaall fvlsvarala lpeictqcpg rvqnlseval yckrtpeltl
       61 qarcclngeg tilgldlqnc slkdpgpnfp qahtaiiidl qanplqgdlv ntfhgfthlq
      121 tlilpqdvnc pgginawdtv tfyvnnqsce gqrnicnste dpeicpengs cvpdgpgllq
      181 cvcadgfhgy kcmrqgsfpl fmflgilgst tlsisillwg tqrrkakas
//
LOCUS       XP_061011015             176 aa            linear   MAM 02-DEC-2023
DEFINITION  protein Mpv17 [Dama dama].
ACCESSION   XP_061011015
VERSION     XP_061011015.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155032.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..176
                     /product="protein Mpv17"
                     /calculated_mol_wt=19467
     Region          109..170
                     /region_name="Mpv17_PMP22"
                     /note="Mpv17 / PMP22 family; pfam04117"
                     /db_xref="CDD:461182"
     CDS             1..176
                     /gene="MPV17"
                     /coded_by="XM_061155032.1:114..644"
                     /db_xref="GeneID:133064652"
ORIGIN      
        1 malwrayqra ltahpwkvqa ltagslmglg dvisqqlver rglrahqagr tlimaslgcg
       61 fvgpvvggwy rvldrlipgt tkvdalkkml ldqggfapcf lgcflplvgt lnglsaqdnw
      121 aklqrdfpda litnyylwpa vqlanfylvp lhyrlavvqc vaviwnsyls wkahrl
//
LOCUS       XP_061011016             176 aa            linear   MAM 02-DEC-2023
DEFINITION  protein Mpv17 [Dama dama].
ACCESSION   XP_061011016
VERSION     XP_061011016.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155033.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..176
                     /product="protein Mpv17"
                     /calculated_mol_wt=19467
     Region          109..170
                     /region_name="Mpv17_PMP22"
                     /note="Mpv17 / PMP22 family; pfam04117"
                     /db_xref="CDD:461182"
     CDS             1..176
                     /gene="MPV17"
                     /coded_by="XM_061155033.1:158..688"
                     /db_xref="GeneID:133064652"
ORIGIN      
        1 malwrayqra ltahpwkvqa ltagslmglg dvisqqlver rglrahqagr tlimaslgcg
       61 fvgpvvggwy rvldrlipgt tkvdalkkml ldqggfapcf lgcflplvgt lnglsaqdnw
      121 aklqrdfpda litnyylwpa vqlanfylvp lhyrlavvqc vaviwnsyls wkahrl
//
LOCUS       XP_061011017             176 aa            linear   MAM 02-DEC-2023
DEFINITION  protein Mpv17 [Dama dama].
ACCESSION   XP_061011017
VERSION     XP_061011017.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155034.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..176
                     /product="protein Mpv17"
                     /calculated_mol_wt=19467
     Region          109..170
                     /region_name="Mpv17_PMP22"
                     /note="Mpv17 / PMP22 family; pfam04117"
                     /db_xref="CDD:461182"
     CDS             1..176
                     /gene="MPV17"
                     /coded_by="XM_061155034.1:40..570"
                     /db_xref="GeneID:133064652"
ORIGIN      
        1 malwrayqra ltahpwkvqa ltagslmglg dvisqqlver rglrahqagr tlimaslgcg
       61 fvgpvvggwy rvldrlipgt tkvdalkkml ldqggfapcf lgcflplvgt lnglsaqdnw
      121 aklqrdfpda litnyylwpa vqlanfylvp lhyrlavvqc vaviwnsyls wkahrl
//
LOCUS       XP_061011018             909 aa            linear   MAM 02-DEC-2023
DEFINITION  general transcription factor 3C polypeptide 2 [Dama dama].
ACCESSION   XP_061011018
VERSION     XP_061011018.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155035.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..909
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..909
                     /product="general transcription factor 3C polypeptide 2"
                     /calculated_mol_wt=100417
     Region          <91..232
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          469..528
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          553..>642
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          557..593
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          614..654
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..909
                     /gene="GTF3C2"
                     /coded_by="XM_061155035.1:477..3206"
                     /db_xref="GeneID:133064654"
ORIGIN      
        1 mdtygvgyma leeagpvgnm tvvdspgqev lnqldvkass ettsveasie mslptpfpgy
       61 edslderrll peqeslsrlq qqdlssemsk vpkpraskpg pkrggrtrkg pkrpqqpnsp
      121 saprvpglld qsnplstpmp kkrgrkskad llllklskgl dqpesphpkm ppedfetppg
      181 erprrraaqv allylqelae elstalpapv scpegpqvss ptqpkiiqpq aaclreegdn
      241 ttrdedfvlq veaeeaeese apsenssdpe paaprstarg stqkqkphvr gmahnglpnh
      301 imapvwkclh ltkdirdqkh sywefaewip lawkwrllse leaapylpqe eksplfsvqr
      361 eglpedgtly rinrfssita hperldvsff tggplwaldw cpvpegsaas qyvalfsspd
      421 mnethslsql ysgpgllqlw dlgtlqqesc lgnrahfvyg iacdhgciwd lkfcpsgawe
      481 lpgtprkapl lprlgllala csdgkvllfs lphpeallaq qpldavkpai ykvqcvatlq
      541 vgsmqasdps ecgqclslaw mptrphhhla agyyngmvvl wnlptnsplq rirlsdgslk
      601 lypfqcflah dqavrtlqwc kanshflasa gsdrkikfwd lrrpyepins ikrflstela
      661 wllpyngvtv aqdncyasyg lcgihyidag ylgfkayfta prkgtvwsls gsdwlgtiaa
      721 gdisgeliaa ilpdmalnpt nvkrpldrrf piykadlipy qdspegqdht sassgapnpp
      781 kartyaetvn hhyllfqdtd lrsfhglphr epmlrmqege gqtrlcldrl qleaihkvrf
      841 spnldsygwl vsggqsglvr ihfvrgltcp lghrmqlesr ahfsamfqla spssgpgfpp
      901 tshcllpgp
//
LOCUS       XP_061011019             909 aa            linear   MAM 02-DEC-2023
DEFINITION  general transcription factor 3C polypeptide 2 [Dama dama].
ACCESSION   XP_061011019
VERSION     XP_061011019.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155036.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..909
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..909
                     /product="general transcription factor 3C polypeptide 2"
                     /calculated_mol_wt=100417
     Region          <91..232
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          469..528
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          553..>642
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          557..593
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          614..654
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..909
                     /gene="GTF3C2"
                     /coded_by="XM_061155036.1:163..2892"
                     /db_xref="GeneID:133064654"
ORIGIN      
        1 mdtygvgyma leeagpvgnm tvvdspgqev lnqldvkass ettsveasie mslptpfpgy
       61 edslderrll peqeslsrlq qqdlssemsk vpkpraskpg pkrggrtrkg pkrpqqpnsp
      121 saprvpglld qsnplstpmp kkrgrkskad llllklskgl dqpesphpkm ppedfetppg
      181 erprrraaqv allylqelae elstalpapv scpegpqvss ptqpkiiqpq aaclreegdn
      241 ttrdedfvlq veaeeaeese apsenssdpe paaprstarg stqkqkphvr gmahnglpnh
      301 imapvwkclh ltkdirdqkh sywefaewip lawkwrllse leaapylpqe eksplfsvqr
      361 eglpedgtly rinrfssita hperldvsff tggplwaldw cpvpegsaas qyvalfsspd
      421 mnethslsql ysgpgllqlw dlgtlqqesc lgnrahfvyg iacdhgciwd lkfcpsgawe
      481 lpgtprkapl lprlgllala csdgkvllfs lphpeallaq qpldavkpai ykvqcvatlq
      541 vgsmqasdps ecgqclslaw mptrphhhla agyyngmvvl wnlptnsplq rirlsdgslk
      601 lypfqcflah dqavrtlqwc kanshflasa gsdrkikfwd lrrpyepins ikrflstela
      661 wllpyngvtv aqdncyasyg lcgihyidag ylgfkayfta prkgtvwsls gsdwlgtiaa
      721 gdisgeliaa ilpdmalnpt nvkrpldrrf piykadlipy qdspegqdht sassgapnpp
      781 kartyaetvn hhyllfqdtd lrsfhglphr epmlrmqege gqtrlcldrl qleaihkvrf
      841 spnldsygwl vsggqsglvr ihfvrgltcp lghrmqlesr ahfsamfqla spssgpgfpp
      901 tshcllpgp
//
LOCUS       XP_061011020             545 aa            linear   MAM 02-DEC-2023
DEFINITION  translation initiation factor eIF-2B subunit delta isoform X1 [Dama
            dama].
ACCESSION   XP_061011020
VERSION     XP_061011020.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155037.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..545
                     /product="translation initiation factor eIF-2B subunit
                     delta isoform X1"
                     /calculated_mol_wt=59434
     Region          241..531
                     /region_name="IF-2B"
                     /note="Initiation factor 2 subunit family; pfam01008"
                     /db_xref="CDD:395798"
     CDS             1..545
                     /gene="EIF2B4"
                     /coded_by="XM_061155037.1:282..1919"
                     /db_xref="GeneID:133064655"
ORIGIN      
        1 mpsqqpavps tsppkpsrsl ssslcalfsd adsgsgmkae laprsgaggr emtqeeklql
       61 rkekkqqkkk rkeekgaeae tgsavsaaqc qggpakhltg pdsqlgttke kvpagrskae
      121 lraerrakqe aeralkqark gdqggpppqa cpstagetps gvkrlpehsq vddptllrrl
      181 vkkperqqvp trkdygskvs lfshlpqysr qnsltqfmsi pssvihpamv rlglqysqgl
      241 vsgsnarcia llralqqviq dyttppneel srdlvnklkp yfsfltqcrp lsasmynaik
      301 flnkeitvvs sskreeeaks elqaaidryi kekivlaaqa isrfaykkis ngdvilvygc
      361 sslvsqilqe awakgrqfrv vvvdsrprle gkhtlrslvr agvpasylli paasyvlpev
      421 skvllgahal langsvmsrv gtaqlalvar ahnvpvlvcc etykfcervq tdafvsneld
      481 dpddllcerg ehvalanwqn hsslrllnlv ydvtppelvd lvitelgmip cssvpvvlrv
      541 kssdq
//
LOCUS       XP_061011021             524 aa            linear   MAM 02-DEC-2023
DEFINITION  translation initiation factor eIF-2B subunit delta isoform X2 [Dama
            dama].
ACCESSION   XP_061011021
VERSION     XP_061011021.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155038.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..524
                     /product="translation initiation factor eIF-2B subunit
                     delta isoform X2"
                     /calculated_mol_wt=57306
     Region          220..510
                     /region_name="IF-2B"
                     /note="Initiation factor 2 subunit family; pfam01008"
                     /db_xref="CDD:395798"
     CDS             1..524
                     /gene="EIF2B4"
                     /coded_by="XM_061155038.1:131..1705"
                     /db_xref="GeneID:133064655"
ORIGIN      
        1 matvavavre dsgsgmkael aprsgaggre mtqeeklqlr kekkqqkkkr keekgaeaet
       61 gsavsaaqcq ggpakhltgp dsqlgttkek vpagrskael raerrakqea eralkqarkg
      121 dqggpppqac pstagetpsg vkrlpehsqv ddptllrrlv kkperqqvpt rkdygskvsl
      181 fshlpqysrq nsltqfmsip ssvihpamvr lglqysqglv sgsnarcial lralqqviqd
      241 yttppneels rdlvnklkpy fsfltqcrpl sasmynaikf lnkeitvvss skreeeakse
      301 lqaaidryik ekivlaaqai srfaykkisn gdvilvygcs slvsqilqea wakgrqfrvv
      361 vvdsrprleg khtlrslvra gvpasyllip aasyvlpevs kvllgahall angsvmsrvg
      421 taqlalvara hnvpvlvcce tykfcervqt dafvsneldd pddllcerge hvalanwqnh
      481 sslrllnlvy dvtppelvdl vitelgmipc ssvpvvlrvk ssdq
//
LOCUS       XP_061011022             509 aa            linear   MAM 02-DEC-2023
DEFINITION  translation initiation factor eIF-2B subunit delta isoform X3 [Dama
            dama].
ACCESSION   XP_061011022
VERSION     XP_061011022.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155039.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..509
                     /product="translation initiation factor eIF-2B subunit
                     delta isoform X3"
                     /calculated_mol_wt=55874
     Region          205..495
                     /region_name="IF-2B"
                     /note="Initiation factor 2 subunit family; pfam01008"
                     /db_xref="CDD:395798"
     CDS             1..509
                     /gene="EIF2B4"
                     /coded_by="XM_061155039.1:181..1710"
                     /db_xref="GeneID:133064655"
ORIGIN      
        1 mkaelaprsg aggremtqee klqlrkekkq qkkkrkeekg aeaetgsavs aaqcqggpak
       61 hltgpdsqlg ttkekvpagr skaelraerr akqeaeralk qarkgdqggp ppqacpstag
      121 etpsgvkrlp ehsqvddptl lrrlvkkper qqvptrkdyg skvslfshlp qysrqnsltq
      181 fmsipssvih pamvrlglqy sqglvsgsna rciallralq qviqdyttpp neelsrdlvn
      241 klkpyfsflt qcrplsasmy naikflnkei tvvssskree eakselqaai dryikekivl
      301 aaqaisrfay kkisngdvil vygcsslvsq ilqeawakgr qfrvvvvdsr prlegkhtlr
      361 slvragvpas yllipaasyv lpevskvllg ahallangsv msrvgtaqla lvarahnvpv
      421 lvccetykfc ervqtdafvs nelddpddll cergehvala nwqnhsslrl lnlvydvtpp
      481 elvdlvitel gmipcssvpv vlrvkssdq
//
LOCUS       XP_061011023             443 aa            linear   MAM 02-DEC-2023
DEFINITION  translation initiation factor eIF-2B subunit delta isoform X4 [Dama
            dama].
ACCESSION   XP_061011023
VERSION     XP_061011023.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155040.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..443
                     /product="translation initiation factor eIF-2B subunit
                     delta isoform X4"
                     /calculated_mol_wt=48195
     Region          241..429
                     /region_name="IF-2B"
                     /note="Initiation factor 2 subunit family; pfam01008"
                     /db_xref="CDD:395798"
     CDS             1..443
                     /gene="EIF2B4"
                     /coded_by="XM_061155040.1:283..1614"
                     /db_xref="GeneID:133064655"
ORIGIN      
        1 mpsqqpavps tsppkpsrsl ssslcalfsd adsgsgmkae laprsgaggr emtqeeklql
       61 rkekkqqkkk rkeekgaeae tgsavsaaqc qggpakhltg pdsqlgttke kvpagrskae
      121 lraerrakqe aeralkqark gdqggpppqa cpstagetps gvkrlpehsq vddptllrrl
      181 vkkperqqvp trkdygskvs lfshlpqysr qnsltqfmsi pssvihpamv rlglqysqgl
      241 vsgsnarcia llralqqviq dyttppneel srdlvnklkp yfsfltqcrp lsasmynaik
      301 flnkeitvvs sskreeevsk vllgahalla ngsvmsrvgt aqlalvarah nvpvlvccet
      361 ykfcervqtd afvsnelddp ddllcergeh valanwqnhs slrllnlvyd vtppelvdlv
      421 itelgmipcs svpvvlrvks sdq
//
LOCUS       XP_061011024             317 aa            linear   MAM 02-DEC-2023
DEFINITION  translation initiation factor eIF-2B subunit delta isoform X5 [Dama
            dama].
ACCESSION   XP_061011024
VERSION     XP_061011024.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155041.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..317
                     /product="translation initiation factor eIF-2B subunit
                     delta isoform X5"
                     /calculated_mol_wt=34899
     Region          13..303
                     /region_name="IF-2B"
                     /note="Initiation factor 2 subunit family; pfam01008"
                     /db_xref="CDD:395798"
     CDS             1..317
                     /gene="EIF2B4"
                     /coded_by="XM_061155041.1:95..1048"
                     /db_xref="GeneID:133064655"
ORIGIN      
        1 mvrlglqysq glvsgsnarc iallralqqv iqdyttppne elsrdlvnkl kpyfsfltqc
       61 rplsasmyna ikflnkeitv vssskreeea kselqaaidr yikekivlaa qaisrfaykk
      121 isngdvilvy gcsslvsqil qeawakgrqf rvvvvdsrpr legkhtlrsl vragvpasyl
      181 lipaasyvlp evskvllgah allangsvms rvgtaqlalv arahnvpvlv ccetykfcer
      241 vqtdafvsne lddpddllce rgehvalanw qnhsslrlln lvydvtppel vdlvitelgm
      301 ipcssvpvvl rvkssdq
//
LOCUS       XP_061011025             543 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 513 isoform X1 [Dama dama].
ACCESSION   XP_061011025
VERSION     XP_061011025.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155042.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..543
                     /product="zinc finger protein 513 isoform X1"
                     /calculated_mol_wt=58105
     Region          154..174
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(159,161,163,165..166,169..170,173,187,189,193..194,
                     197..198,201,215,217,219,221..222,225..226,229)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          166..191
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          182..202
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(182,185,198,202)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          194..219
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          210..230
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          364..384
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(369,371,373,375..376,379..380,383,397,399,403..404,
                     407..408,411,425,427,429,431..432,435..436,439)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          376..401
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          392..412
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(392,395,408,412)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          404..427
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          416..>489
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          420..440
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          448..468
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          476..495
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..543
                     /gene="ZNF513"
                     /coded_by="XM_061155042.1:103..1734"
                     /db_xref="GeneID:133064656"
ORIGIN      
        1 mprrkqshpq pvkcegvkvd tedsldegpg alvlesdlll gqdlefeeee eeeeeegdrn
       61 sdqlmgferd segdslgarp glpyglsdde sgggralsae seveepargp geargerpgp
      121 acqlcggptg egpccgaggp gggpplpprl lyscrlcafv shysshlkrh mqthsgekpf
      181 rcgrcpyasa qlvnltrhtr thtgekpyrc phcpfacssl gnlrrhqrth ggpptppcpt
      241 cgfrccaprp arppspteqe gavprrpeda lllpdlslhv spggasflpd cgqlrgegeg
      301 lcgtgseplp ellfpwtcrn cgqeleegeg srlgaatcgr cmqgetggga sggpqgpsdk
      361 gfacslcpfa thypnhlarh mkthsgekpf rcarcpyasa hldnlkrhqr vhtgekpykc
      421 plcpyacgnl anlkrhgrih sgdkpfrcsl cnyscnqsmn lkrhmlrhtg ekpfrcatca
      481 yttghwdnyk rhqkvhghgg aggpglsase gwapphsppp vlssrgptal gatssralht
      541 dsp
//
LOCUS       XP_061011026             512 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 513 isoform X2 [Dama dama].
ACCESSION   XP_061011026
VERSION     XP_061011026.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155043.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..512
                     /product="zinc finger protein 513 isoform X2"
                     /calculated_mol_wt=55187
     Region          151..>452
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          154..174
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(159,161,163,165..166,169..170,173,187,189,193..194,
                     197..198,201,215,217,219,221..222,225..226,229)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          166..191
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          182..202
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(182,185,198,202)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          194..219
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          210..230
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          364..384
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(369,371,373,375..376,379..380,383,397,399,403..404,
                     407..408,411,425,427,429,431..432,435..436,439)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          376..401
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          392..412
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(392,395,408,412)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          404..427
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          416..>489
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          420..440
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          448..468
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          476..495
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..512
                     /gene="ZNF513"
                     /coded_by="XM_061155043.1:103..1641"
                     /db_xref="GeneID:133064656"
ORIGIN      
        1 mprrkqshpq pvkcegvkvd tedsldegpg alvlesdlll gqdlefeeee eeeeeegdrn
       61 sdqlmgferd segdslgarp glpyglsdde sgggralsae seveepargp geargerpgp
      121 acqlcggptg egpccgaggp gggpplpprl lyscrlcafv shysshlkrh mqthsgekpf
      181 rcgrcpyasa qlvnltrhtr thtgekpyrc phcpfacssl gnlrrhqrth ggpptppcpt
      241 cgfrccaprp arppspteqe gavprrpeda lllpdlslhv spggasflpd cgqlrgegeg
      301 lcgtgseplp ellfpwtcrn cgqeleegeg srlgaatcgr cmqgetggga sggpqgpsdk
      361 gfacslcpfa thypnhlarh mkthsgekpf rcarcpyasa hldnlkrhqr vhtgekpykc
      421 plcpyacgnl anlkrhgrih sgdkpfrcsl cnyscnqsmn lkrhmlrhtg ekpfrcatca
      481 yttghwdnyk rhqktdqkpp spsspagqga ph
//
LOCUS       XP_061011027             479 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 513 isoform X3 [Dama dama].
ACCESSION   XP_061011027
VERSION     XP_061011027.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155044.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..479
                     /product="zinc finger protein 513 isoform X3"
                     /calculated_mol_wt=50869
     Region          90..110
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(95,97,99,101..102,105..106,109,123,125,129..130,
                     133..134,137,151,153,155,157..158,161..162,165)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          102..127
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          118..138
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          130..155
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          146..166
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          300..320
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(305,307,309,311..312,315..316,319,333,335,339..340,
                     343..344,347,361,363,365,367..368,371..372,375)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          312..337
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          328..348
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          340..363
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          352..>425
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          356..376
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          384..404
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          412..431
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..479
                     /gene="ZNF513"
                     /coded_by="XM_061155044.1:289..1728"
                     /db_xref="GeneID:133064656"
ORIGIN      
        1 mgferdsegd slgarpglpy glsddesggg ralsaeseve epargpgear gerpgpacql
       61 cggptgegpc cgaggpgggp plpprllysc rlcafvshys shlkrhmqth sgekpfrcgr
      121 cpyasaqlvn ltrhtrthtg ekpyrcphcp facsslgnlr rhqrthggpp tppcptcgfr
      181 ccaprparpp spteqegavp rrpedalllp dlslhvspgg asflpdcgql rgegeglcgt
      241 gseplpellf pwtcrncgqe leegegsrlg aatcgrcmqg etgggasggp qgpsdkgfac
      301 slcpfathyp nhlarhmkth sgekpfrcar cpyasahldn lkrhqrvhtg ekpykcplcp
      361 yacgnlanlk rhgrihsgdk pfrcslcnys cnqsmnlkrh mlrhtgekpf rcatcayttg
      421 hwdnykrhqk vhghggaggp glsasegwap phspppvlss rgptalgats sralhtdsp
//
LOCUS       XP_061011028             470 aa            linear   MAM 02-DEC-2023
DEFINITION  sorting nexin-17 isoform X1 [Dama dama].
ACCESSION   XP_061011028
VERSION     XP_061011028.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155045.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..470
                     /product="sorting nexin-17 isoform X1"
                     /calculated_mol_wt=52684
     Region          2..106
                     /region_name="PX_SNX17_31"
                     /note="The phosphoinositide binding Phox Homology domain
                     of Sorting Nexins 17 and 31; cd06885"
                     /db_xref="CDD:132795"
     Site            order(36..38,61..62,75)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132795"
     Region          115..207
                     /region_name="FERM_F1_SNX17"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain, F1 sub-domain, found in sorting nexin protein 17
                     (SNX17); cd16121"
                     /db_xref="CDD:340538"
     Region          269..388
                     /region_name="FERM-like_C_SNX17"
                     /note="Atypical FERM-like domain C-lobe of Sorting nexin
                     17; cd13337"
                     /db_xref="CDD:270145"
     CDS             1..470
                     /gene="SNX17"
                     /coded_by="XM_061155045.1:142..1554"
                     /db_xref="GeneID:133064657"
ORIGIN      
        1 mhfsipetes rsgdsggsay vaynihvngv lhcrvrysql lglheqlrke yganvlpafp
       61 pkklfsltpa eveqrreqle kymqavrqdp llgssetfns flrraqqetq qvpteevsle
      121 vllsngqkvl vnvltsdqte dvleavaakl dlpddligyf slflvreked gafsfvrklq
      181 efelpyvsvt slrsqeykiv lrksywdsay dddvmenrvg lnllyaqtva diergwilvt
      241 keqhrqlksl qekvskkefl rlaqtlrhyg ylrfdacvad fpekdcpvvv sagnselslq
      301 lrlpgqqlre gsfrvtrmrc wrvtssvplp sggtsspgrg rgevrlelaf eylmskdrlq
      361 wvtitspqai mmsiclqsmv delmvkksgg slrkmlrrrv ggtlrrsdsq qavkspplle
      421 spdasresmv klssklsavs lrgigtsgtd asasdvhgnf afegigdedl
//
LOCUS       XP_061011029             445 aa            linear   MAM 02-DEC-2023
DEFINITION  sorting nexin-17 isoform X2 [Dama dama].
ACCESSION   XP_061011029
VERSION     XP_061011029.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155046.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..445
                     /product="sorting nexin-17 isoform X2"
                     /calculated_mol_wt=49782
     Region          2..81
                     /region_name="PX_domain"
                     /note="The Phox Homology domain, a phosphoinositide
                     binding module; cl02563"
                     /db_xref="CDD:470617"
     Region          90..182
                     /region_name="FERM_F1_SNX17"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain, F1 sub-domain, found in sorting nexin protein 17
                     (SNX17); cd16121"
                     /db_xref="CDD:340538"
     Region          244..363
                     /region_name="FERM-like_C_SNX17"
                     /note="Atypical FERM-like domain C-lobe of Sorting nexin
                     17; cd13337"
                     /db_xref="CDD:270145"
     CDS             1..445
                     /gene="SNX17"
                     /coded_by="XM_061155046.1:142..1479"
                     /db_xref="GeneID:133064657"
ORIGIN      
        1 mhfsipetes rsgdsggsay vlrkeyganv lpafppkklf sltpaeveqr reqlekymqa
       61 vrqdpllgss etfnsflrra qqetqqvpte evslevllsn gqkvlvnvlt sdqtedvlea
      121 vaakldlpdd ligyfslflv rekedgafsf vrklqefelp yvsvtslrsq eykivlrksy
      181 wdsaydddvm enrvglnlly aqtvadierg wilvtkeqhr qlkslqekvs kkeflrlaqt
      241 lrhygylrfd acvadfpekd cpvvvsagns elslqlrlpg qqlregsfrv trmrcwrvts
      301 svplpsggts spgrgrgevr lelafeylms kdrlqwvtit spqaimmsic lqsmvdelmv
      361 kksggslrkm lrrrvggtlr rsdsqqavks ppllespdas resmvklssk lsavslrgig
      421 tsgtdasasd vhgnfafegi gdedl
//
LOCUS       XP_061011030             543 aa            linear   MAM 02-DEC-2023
DEFINITION  protein phosphatase 1G [Dama dama].
ACCESSION   XP_061011030
VERSION     XP_061011030.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155047.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..543
                     /product="protein phosphatase 1G"
                     /calculated_mol_wt=58536
     Region          25..>110
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; smart00332"
                     /db_xref="CDD:214625"
     Region          <322..503
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cd00143"
                     /db_xref="CDD:238083"
     CDS             1..543
                     /gene="PPM1G"
                     /coded_by="XM_061155047.1:200..1831"
                     /db_xref="GeneID:133064659"
ORIGIN      
        1 mgaylsqpnt vkcsgdgvga srlplpygfs amqgwrvsme dahncipeld setamfsvyd
       61 ghggeevaly cakylpdiik dqkaykegkl qkaledafla idakltteev ikelaqiagr
      121 ptededekek vadeddvdne eaallheeat mtieelltry gqnchkgaph sksgagtgee
      181 pgsqglngea gpedpsrets teengptaka htglssnsec gteagqggep gtptgeagps
      241 cssasdklpr vakskffeds edesdeaeee eedseecsee edgysseeae neededdtee
      301 aeedeeeeem mvpgmegkee pgsdsgttav valirgkqli vanagdsrcv vseagkaldm
      361 sydhkpedev elariknagg kvtmdgrvng glnlsraigd hfykrnknlp peeqmisalp
      421 dikvltltdd hefmviacdg iwnvmssqev idfiqskisq rdengelrll ssiveelldq
      481 clapdtsgdg tgcdnmtcii icfkprntaa pqlesgkrkl eevlstegae engnsdkkka
      541 krd
//
LOCUS       XP_061011031            1749 aa            linear   MAM 02-DEC-2023
DEFINITION  intraflagellar transport protein 172 homolog isoform X1 [Dama
            dama].
ACCESSION   XP_061011031
VERSION     XP_061011031.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155048.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1749
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1749
                     /product="intraflagellar transport protein 172 homolog
                     isoform X1"
                     /calculated_mol_wt=196996
     Region          17..318
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          20..64
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Site            order(33,37,43..44,55..56,83,87,93,98,111,127,132,
                     138..139,151,168,173,181..182,195..196,212,216,222..223,
                     234..235,256,261,275..276,303,314)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          69..110
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          116..148
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          155..194
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          200..248
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          810..>994
                     /region_name="SNAP"
                     /note="Soluble N-ethylmaleimide-sensitive factor (NSF)
                     Attachment Protein family; cl24038"
                     /db_xref="CDD:451671"
     Region          810..866
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276937"
     Region          870..906
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276937"
     Region          902..>1192
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          909..954
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276937"
     Region          1155..>1297
                     /region_name="HemYx"
                     /note="Uncharacterized protein HemY, contains HemY_N
                     domain and TPR repeats (unrelated to protoporphyrinogen
                     oxidase HemY) [Function unknown]; COG3071"
                     /db_xref="CDD:442305"
     CDS             1..1749
                     /gene="IFT172"
                     /coded_by="XM_061155048.1:140..5389"
                     /db_xref="GeneID:133064660"
ORIGIN      
        1 mqlkhlrtll spqdgaakvt cmawsqnnak favctvdrvv llydehgerr dkfstkpadm
       61 kygrksymvk gmafspdstk iaigqtdnii yvykigedwg dkkvicnkfi qtsavtclqw
      121 paeyiivfgl aegkvrlans ktnksstiyg tdsyvvsltt ncsgkgilsg hadgtivryf
      181 fddegsgesq gklvnhpcpp yalawatnsi vaagcdrriv aygkeghvlq tfdysrdple
      241 refttaaasp ggqsvvlgsy drlrvlnwsp rrniweeakp keianlytit alawkrdgsr
      301 lcagtlcggv eqfdcclrrs iyknkfelty vgpsqvivkn lssgtrvvlk shygyeveev
      361 kilgkerylv ahtsdtlllg dlntnrlsev awqgsggnek yffenenvcm ifnageltlv
      421 eygsndtlgs vrtefmnphl isvrinerrq rgmednkkla ylvdiktiai vdliggynig
      481 tishesrvdw lelnetghkl lfrdrklrlh lydvescskt milnfcsyvq wvpgsdvlva
      541 qnrnnlcvwy nieapervtt ssirgdvvgl ergggktevm vtegvttvay tldegliefg
      601 taiedgnytr atafletlem tpeteamwkt lsklsleakq lhiaercfsa lghvakarfl
      661 hetneiadqv sreyggegtd syqvrarlam leknyklaem ifleqnavee amdmyqelhr
      721 wdeciavaea kghpaleklr rgyyqwlmdt qqeeragelq esqgdglaai slylkaglpa
      781 kaarlvlnre ellantelve hitaalikge lyeragdlfe kirnpqqale cyckgsafmk
      841 avelarvafp aevvrleeaw gdhlvqqkql daainhyiea rcsikaieaa lgarqwkkai
      901 yildlqdrnt askyyprvaq hyaslqeyei aeelytkgdr tkdaidmytq agrweqahkl
      961 amkcmrpedv svlyitqaqe metqgkyrea erlyvtveep dlaismfkkh klyddmirlv
     1021 gkhhpdllsd thlhlgkele aegrlqeaey hyleaqewka tvnmyrsngl weeayrvaka
     1081 hgganahkhv aylwakslgg eaavrllnkl glleaaidha adncsfefaf elsrlalkhk
     1141 tpeihlryam yledegkfee aetefikagk pkeavlmfvh nqdweaaqrv aeahdpdsva
     1201 evlvgqarga leekdfqkae glllraqrpg lalnyykeag lwsdalrick dyvpgqleal
     1261 qeeyereatk kgargmeglv eqarqweqag eysravdcyl kvrdtgsssl vekcwlkaae
     1321 lsikflpppr slevvravgp qligigkhsa aaelylnldl vkeaidafie geewnkakrv
     1381 akeldpryed yvdqcykefl ksqgkvdslv gvdvvaaldl yveqgqwdkc ietatkqnyk
     1441 ilhkyvalya thlireggya qalalyvqhg apanpqnfni ykriftdmvs spgtnsaeay
     1501 hnwadlrdvl fnlcenlvks seanspahee fetmlliahy yatrsaaqsv keletvaakl
     1561 svsllrhtql lpadkafyea giaakavgwe nmafiflnrf ldltdaieeg tldaldhsdf
     1621 qdtdipfevp lpakqhvpea qreevrdwvl tvsmdqrleq vlprdergay easlvaastg
     1681 vralpclitg ypilrnkief krpgkaankk nwnkflmaik tshspvcqdv lkfisqwcgg
     1741 lpstsfsfq
//
LOCUS       XP_061011032            1749 aa            linear   MAM 02-DEC-2023
DEFINITION  intraflagellar transport protein 172 homolog isoform X1 [Dama
            dama].
ACCESSION   XP_061011032
VERSION     XP_061011032.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155049.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1749
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1749
                     /product="intraflagellar transport protein 172 homolog
                     isoform X1"
                     /calculated_mol_wt=196996
     Region          17..318
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          20..64
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Site            order(33,37,43..44,55..56,83,87,93,98,111,127,132,
                     138..139,151,168,173,181..182,195..196,212,216,222..223,
                     234..235,256,261,275..276,303,314)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          69..110
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          116..148
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          155..194
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          200..248
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          810..>994
                     /region_name="SNAP"
                     /note="Soluble N-ethylmaleimide-sensitive factor (NSF)
                     Attachment Protein family; cl24038"
                     /db_xref="CDD:451671"
     Region          810..866
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276937"
     Region          870..906
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276937"
     Region          902..>1192
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          909..954
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276937"
     Region          1155..>1297
                     /region_name="HemYx"
                     /note="Uncharacterized protein HemY, contains HemY_N
                     domain and TPR repeats (unrelated to protoporphyrinogen
                     oxidase HemY) [Function unknown]; COG3071"
                     /db_xref="CDD:442305"
     CDS             1..1749
                     /gene="IFT172"
                     /coded_by="XM_061155049.1:140..5389"
                     /db_xref="GeneID:133064660"
ORIGIN      
        1 mqlkhlrtll spqdgaakvt cmawsqnnak favctvdrvv llydehgerr dkfstkpadm
       61 kygrksymvk gmafspdstk iaigqtdnii yvykigedwg dkkvicnkfi qtsavtclqw
      121 paeyiivfgl aegkvrlans ktnksstiyg tdsyvvsltt ncsgkgilsg hadgtivryf
      181 fddegsgesq gklvnhpcpp yalawatnsi vaagcdrriv aygkeghvlq tfdysrdple
      241 refttaaasp ggqsvvlgsy drlrvlnwsp rrniweeakp keianlytit alawkrdgsr
      301 lcagtlcggv eqfdcclrrs iyknkfelty vgpsqvivkn lssgtrvvlk shygyeveev
      361 kilgkerylv ahtsdtlllg dlntnrlsev awqgsggnek yffenenvcm ifnageltlv
      421 eygsndtlgs vrtefmnphl isvrinerrq rgmednkkla ylvdiktiai vdliggynig
      481 tishesrvdw lelnetghkl lfrdrklrlh lydvescskt milnfcsyvq wvpgsdvlva
      541 qnrnnlcvwy nieapervtt ssirgdvvgl ergggktevm vtegvttvay tldegliefg
      601 taiedgnytr atafletlem tpeteamwkt lsklsleakq lhiaercfsa lghvakarfl
      661 hetneiadqv sreyggegtd syqvrarlam leknyklaem ifleqnavee amdmyqelhr
      721 wdeciavaea kghpaleklr rgyyqwlmdt qqeeragelq esqgdglaai slylkaglpa
      781 kaarlvlnre ellantelve hitaalikge lyeragdlfe kirnpqqale cyckgsafmk
      841 avelarvafp aevvrleeaw gdhlvqqkql daainhyiea rcsikaieaa lgarqwkkai
      901 yildlqdrnt askyyprvaq hyaslqeyei aeelytkgdr tkdaidmytq agrweqahkl
      961 amkcmrpedv svlyitqaqe metqgkyrea erlyvtveep dlaismfkkh klyddmirlv
     1021 gkhhpdllsd thlhlgkele aegrlqeaey hyleaqewka tvnmyrsngl weeayrvaka
     1081 hgganahkhv aylwakslgg eaavrllnkl glleaaidha adncsfefaf elsrlalkhk
     1141 tpeihlryam yledegkfee aetefikagk pkeavlmfvh nqdweaaqrv aeahdpdsva
     1201 evlvgqarga leekdfqkae glllraqrpg lalnyykeag lwsdalrick dyvpgqleal
     1261 qeeyereatk kgargmeglv eqarqweqag eysravdcyl kvrdtgsssl vekcwlkaae
     1321 lsikflpppr slevvravgp qligigkhsa aaelylnldl vkeaidafie geewnkakrv
     1381 akeldpryed yvdqcykefl ksqgkvdslv gvdvvaaldl yveqgqwdkc ietatkqnyk
     1441 ilhkyvalya thlireggya qalalyvqhg apanpqnfni ykriftdmvs spgtnsaeay
     1501 hnwadlrdvl fnlcenlvks seanspahee fetmlliahy yatrsaaqsv keletvaakl
     1561 svsllrhtql lpadkafyea giaakavgwe nmafiflnrf ldltdaieeg tldaldhsdf
     1621 qdtdipfevp lpakqhvpea qreevrdwvl tvsmdqrleq vlprdergay easlvaastg
     1681 vralpclitg ypilrnkief krpgkaankk nwnkflmaik tshspvcqdv lkfisqwcgg
     1741 lpstsfsfq
//
LOCUS       XP_061011033            1748 aa            linear   MAM 02-DEC-2023
DEFINITION  intraflagellar transport protein 172 homolog isoform X2 [Dama
            dama].
ACCESSION   XP_061011033
VERSION     XP_061011033.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155050.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1748
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1748
                     /product="intraflagellar transport protein 172 homolog
                     isoform X2"
                     /calculated_mol_wt=196925
     Region          17..318
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          20..64
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Site            order(33,37,43..44,55..56,83,87,93,98,111,127,132,
                     138..139,151,168,173,181..182,195..196,212,216,222..223,
                     234..235,256,261,275..276,303,314)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          69..110
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          116..148
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          155..194
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          200..248
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          810..>993
                     /region_name="SNAP"
                     /note="Soluble N-ethylmaleimide-sensitive factor (NSF)
                     Attachment Protein family; cl24038"
                     /db_xref="CDD:451671"
     Region          810..865
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276937"
     Region          869..905
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276937"
     Region          901..>1191
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          908..953
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276937"
     Region          1154..>1296
                     /region_name="HemYx"
                     /note="Uncharacterized protein HemY, contains HemY_N
                     domain and TPR repeats (unrelated to protoporphyrinogen
                     oxidase HemY) [Function unknown]; COG3071"
                     /db_xref="CDD:442305"
     CDS             1..1748
                     /gene="IFT172"
                     /coded_by="XM_061155050.1:140..5386"
                     /db_xref="GeneID:133064660"
ORIGIN      
        1 mqlkhlrtll spqdgaakvt cmawsqnnak favctvdrvv llydehgerr dkfstkpadm
       61 kygrksymvk gmafspdstk iaigqtdnii yvykigedwg dkkvicnkfi qtsavtclqw
      121 paeyiivfgl aegkvrlans ktnksstiyg tdsyvvsltt ncsgkgilsg hadgtivryf
      181 fddegsgesq gklvnhpcpp yalawatnsi vaagcdrriv aygkeghvlq tfdysrdple
      241 refttaaasp ggqsvvlgsy drlrvlnwsp rrniweeakp keianlytit alawkrdgsr
      301 lcagtlcggv eqfdcclrrs iyknkfelty vgpsqvivkn lssgtrvvlk shygyeveev
      361 kilgkerylv ahtsdtlllg dlntnrlsev awqgsggnek yffenenvcm ifnageltlv
      421 eygsndtlgs vrtefmnphl isvrinerrq rgmednkkla ylvdiktiai vdliggynig
      481 tishesrvdw lelnetghkl lfrdrklrlh lydvescskt milnfcsyvq wvpgsdvlva
      541 qnrnnlcvwy nieapervtt ssirgdvvgl ergggktevm vtegvttvay tldegliefg
      601 taiedgnytr atafletlem tpeteamwkt lsklsleakq lhiaercfsa lghvakarfl
      661 hetneiadqv sreyggegtd syqvrarlam leknyklaem ifleqnavee amdmyqelhr
      721 wdeciavaea kghpaleklr rgyyqwlmdt qqeeragelq esqgdglaai slylkaglpa
      781 kaarlvlnre ellantelve hitaalikge lyeragdlfe kirnpqqale cyckgsafmk
      841 velarvafpa evvrleeawg dhlvqqkqld aainhyiear csikaieaal garqwkkaiy
      901 ildlqdrnta skyyprvaqh yaslqeyeia eelytkgdrt kdaidmytqa grweqahkla
      961 mkcmrpedvs vlyitqaqem etqgkyreae rlyvtveepd laismfkkhk lyddmirlvg
     1021 khhpdllsdt hlhlgkelea egrlqeaeyh yleaqewkat vnmyrsnglw eeayrvakah
     1081 gganahkhva ylwakslgge aavrllnklg lleaaidhaa dncsfefafe lsrlalkhkt
     1141 peihlryamy ledegkfeea etefikagkp keavlmfvhn qdweaaqrva eahdpdsvae
     1201 vlvgqargal eekdfqkaeg lllraqrpgl alnyykeagl wsdalrickd yvpgqlealq
     1261 eeyereatkk gargmeglve qarqweqage ysravdcylk vrdtgssslv ekcwlkaael
     1321 sikflppprs levvravgpq ligigkhsaa aelylnldlv keaidafieg eewnkakrva
     1381 keldpryedy vdqcykeflk sqgkvdslvg vdvvaaldly veqgqwdkci etatkqnyki
     1441 lhkyvalyat hlireggyaq alalyvqhga panpqnfniy kriftdmvss pgtnsaeayh
     1501 nwadlrdvlf nlcenlvkss eanspaheef etmlliahyy atrsaaqsvk eletvaakls
     1561 vsllrhtqll padkafyeag iaakavgwen mafiflnrfl dltdaieegt ldaldhsdfq
     1621 dtdipfevpl pakqhvpeaq reevrdwvlt vsmdqrleqv lprdergaye aslvaastgv
     1681 ralpclitgy pilrnkiefk rpgkaankkn wnkflmaikt shspvcqdvl kfisqwcggl
     1741 pstsfsfq
//
LOCUS       XP_061011035             535 aa            linear   MAM 02-DEC-2023
DEFINITION  nuclear receptor-binding protein [Dama dama].
ACCESSION   XP_061011035
VERSION     XP_061011035.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155052.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..535
                     /product="nuclear receptor-binding protein"
                     /calculated_mol_wt=59724
     Region          60..334
                     /region_name="PK_NRBP1"
                     /note="Pseudokinase domain of Nuclear Receptor Binding
                     Protein 1; cd14034"
                     /db_xref="CDD:270936"
     CDS             1..535
                     /gene="NRBP1"
                     /coded_by="XM_061155052.1:168..1775"
                     /db_xref="GeneID:133064661"
ORIGIN      
        1 msegepqtvl ssgsdpkves sssapgltsv sppvtsttsa aspeeeeese deseileesp
       61 cgrwqkrree vnqrnvpgid saylamdtee gvevvwnevq fserknyklq eekvravfdn
      121 liqlehlniv kfhkywadik enkarvifit eymssgslkq flkktkknhk tmnekawkrw
      181 ctqilsalsy lhscdppiih gnltcdtifi qhnglikigs vapdtinnhv ktcreeqknl
      241 hffapeygev tnvttavdiy sfgmcalema vleiqgnges syvpqeaiss aiqlledplq
      301 refiqkclqs eparrptare llfhpalfev pslkllaahc ivghqhmipe naleeitknm
      361 dtsavlaeip agpgrepvqt lysqspalel dkfledvrng iypltafglp rpqqpqqeev
      421 tspvvppsvk tptpepaeve trkvvlmqcn iesveegvkh hltlllkled klnrhlscdl
      481 mpnenipela aelvqlgfis eadqsrltsl leetlnkfnf arnstlnsaa vtvss
//
LOCUS       XP_061011036             240 aa            linear   MAM 02-DEC-2023
DEFINITION  keratinocyte-associated protein 3 isoform X1 [Dama dama].
ACCESSION   XP_061011036
VERSION     XP_061011036.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155053.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..240
                     /product="keratinocyte-associated protein 3 isoform X1"
                     /calculated_mol_wt=25757
     Region          19..206
                     /region_name="BCLP"
                     /note="Beta-casein like protein; pfam12304"
                     /db_xref="CDD:463527"
     CDS             1..240
                     /gene="KRTCAP3"
                     /coded_by="XM_061155053.1:95..817"
                     /db_xref="GeneID:133064662"
ORIGIN      
        1 mkcrrlcafd aargprrlmr vglalilvgh vnlllgavlh gtvlrhvanp rgavtpeytt
       61 anvisvgsgl lsvslglval lasrnlfrpr lhwallalal vnlllsaacs lglllavslt
      121 vanggrrlia dchpglldpl vpldqgsgha dcpfdptkiy dtalalwips vfmsaaeaal
      181 sayccvaalt lrgvgpcrkd glqeqleelt efefpkrkwq envqlldqtr dirtaqkswv
//
LOCUS       XP_061011037             240 aa            linear   MAM 02-DEC-2023
DEFINITION  keratinocyte-associated protein 3 isoform X1 [Dama dama].
ACCESSION   XP_061011037
VERSION     XP_061011037.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155054.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..240
                     /product="keratinocyte-associated protein 3 isoform X1"
                     /calculated_mol_wt=25757
     Region          19..206
                     /region_name="BCLP"
                     /note="Beta-casein like protein; pfam12304"
                     /db_xref="CDD:463527"
     CDS             1..240
                     /gene="KRTCAP3"
                     /coded_by="XM_061155054.1:95..817"
                     /db_xref="GeneID:133064662"
ORIGIN      
        1 mkcrrlcafd aargprrlmr vglalilvgh vnlllgavlh gtvlrhvanp rgavtpeytt
       61 anvisvgsgl lsvslglval lasrnlfrpr lhwallalal vnlllsaacs lglllavslt
      121 vanggrrlia dchpglldpl vpldqgsgha dcpfdptkiy dtalalwips vfmsaaeaal
      181 sayccvaalt lrgvgpcrkd glqeqleelt efefpkrkwq envqlldqtr dirtaqkswv
//
LOCUS       XP_061011038             202 aa            linear   MAM 02-DEC-2023
DEFINITION  keratinocyte-associated protein 3 isoform X2 [Dama dama].
ACCESSION   XP_061011038
VERSION     XP_061011038.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155055.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..202
                     /product="keratinocyte-associated protein 3 isoform X2"
                     /calculated_mol_wt=21909
     Region          19..168
                     /region_name="BCLP"
                     /note="Beta-casein like protein; pfam12304"
                     /db_xref="CDD:463527"
     CDS             1..202
                     /gene="KRTCAP3"
                     /coded_by="XM_061155055.1:95..703"
                     /db_xref="GeneID:133064662"
ORIGIN      
        1 mkcrrlcafd aargprrlmr vglalilvgh vnlllgavlh gtvlrhvanp rgavtpeytt
       61 anvisvgsgl lvsflperff gtcgpfgvqe sfspttglld plvpldqgsg hadcpfdptk
      121 iydtalalwi psvfmsaaea alsayccvaa ltlrgvgpcr kdglqeqlee ltefefpkrk
      181 wqenvqlldq trdirtaqks wv
//
LOCUS       XP_061011039             567 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 512 isoform X1 [Dama dama].
ACCESSION   XP_061011039
VERSION     XP_061011039.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155056.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..567
                     /product="zinc finger protein 512 isoform X1"
                     /calculated_mol_wt=64549
     Region          <407..463
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     CDS             1..567
                     /gene="ZNF512"
                     /coded_by="XM_061155056.1:152..1855"
                     /db_xref="GeneID:133064663"
ORIGIN      
        1 mssrldavpa tpgptpfkqq rstrivgakn srtqcsikdn sfqytiphdd slsgsssass
       61 cepvsdfpas frkstywmkm rriksaaash vegsggvstk gkrkprqeed edyrefpqkk
      121 hklygrkqrp kaqpnpkaqt rrirkeppay aagsleeqwy leivdkgsvs cptcqavgrk
      181 tieglkkhme nckqemftch hcgkqlrsla gmkyhvmanh nslpilkagd eidepserer
      241 lrtvlkrlgk lrcmrescss sftsimgyly hvrkcgkgaa elekmtlkch hcgkpyrska
      301 glayhlrseh gpisffpesg qpeclkdmsl esksggrvqr rsakiavyhl qelasaelak
      361 ewpkrkvlqd lvpddrklky trpglptfsq evlhkwksdi kkyhriqcpn qgceavyssv
      421 sglkahlgsc tlgtfvagky kcllcqkefv sesgvkyhin svhaedwfvv nptttksfek
      481 lmkikqrqqe eekrrqqhrs rrslrrrqqp gielpeteps lrvgkdqrrn heellvatsr
      541 kepeqepvss qfqkvkspkt nhkrgkk
//
LOCUS       XP_061011040             566 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 512 isoform X2 [Dama dama].
ACCESSION   XP_061011040
VERSION     XP_061011040.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155057.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..566
                     /product="zinc finger protein 512 isoform X2"
                     /calculated_mol_wt=64462
     Region          <406..462
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     CDS             1..566
                     /gene="ZNF512"
                     /coded_by="XM_061155057.1:156..1856"
                     /db_xref="GeneID:133064663"
ORIGIN      
        1 mssrldavpa tpgptpfkqq rstrivgakn rtqcsikdns fqytiphdds lsgsssassc
       61 epvsdfpasf rkstywmkmr riksaaashv egsggvstkg krkprqeede dyrefpqkkh
      121 klygrkqrpk aqpnpkaqtr rirkeppaya agsleeqwyl eivdkgsvsc ptcqavgrkt
      181 ieglkkhmen ckqemftchh cgkqlrslag mkyhvmanhn slpilkagde idepsererl
      241 rtvlkrlgkl rcmrescsss ftsimgylyh vrkcgkgaae lekmtlkchh cgkpyrskag
      301 layhlrsehg pisffpesgq peclkdmsle sksggrvqrr sakiavyhlq elasaelake
      361 wpkrkvlqdl vpddrklkyt rpglptfsqe vlhkwksdik kyhriqcpnq gceavyssvs
      421 glkahlgsct lgtfvagkyk cllcqkefvs esgvkyhins vhaedwfvvn ptttksfekl
      481 mkikqrqqee ekrrqqhrsr rslrrrqqpg ielpetepsl rvgkdqrrnh eellvatsrk
      541 epeqepvssq fqkvkspktn hkrgkk
//
LOCUS       XP_061011041             546 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 512 isoform X3 [Dama dama].
ACCESSION   XP_061011041
VERSION     XP_061011041.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155058.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..546
                     /product="zinc finger protein 512 isoform X3"
                     /calculated_mol_wt=62485
     CDS             1..546
                     /gene="ZNF512"
                     /coded_by="XM_061155058.1:154..1794"
                     /db_xref="GeneID:133064663"
ORIGIN      
        1 mssrldavpa tpgptpfkqq rstrivgakn srtqcsikdn sfqytiphdd slsgsssass
       61 cepvsdfpas frkstywmkm rriksaaash vegsggvstk gkrkprqeed edyrefpqkk
      121 hklygrkqrp kaqpnpkaqt rrirkeppay aagsleeqwy leivdkgsvs cptcqavgrk
      181 tieglkkhme nckqemftch hcgkqlrsla gmkyhvmanh nslpilkagd eidepserer
      241 lrtvlkrlgk lrcmrescss sftsimgyly hvrkcgkgaa elekmtlkch hcgkpyrska
      301 glayhlrseh gpisffpesg qpeclkdmsl esksggrvqr rsakiavyhl qelasaelak
      361 ewpkrkvlqd lvpddrklky trpglptfsq evlhkwksdi kkyhriqcpn qgtfvagkyk
      421 cllcqkefvs esgvkyhins vhaedwfvvn ptttksfekl mkikqrqqee ekrrqqhrsr
      481 rslrrrqqpg ielpetepsl rvgkdqrrnh eellvatsrk epeqepvssq fqkvkspktn
      541 hkrgkk
//
LOCUS       XP_061011042             542 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 512 isoform X4 [Dama dama].
ACCESSION   XP_061011042
VERSION     XP_061011042.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155059.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..542
                     /product="zinc finger protein 512 isoform X4"
                     /calculated_mol_wt=61928
     Region          <382..438
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     CDS             1..542
                     /gene="ZNF512"
                     /coded_by="XM_061155059.1:144..1772"
                     /db_xref="GeneID:133064663"
ORIGIN      
        1 mqcplsrtqc sikdnsfqyt iphddslsgs ssasscepvs dfpasfrkst ywmkmrriks
       61 aaashvegsg gvstkgkrkp rqeededyre fpqkkhklyg rkqrpkaqpn pkaqtrrirk
      121 eppayaagsl eeqwyleivd kgsvscptcq avgrktiegl kkhmenckqe mftchhcgkq
      181 lrslagmkyh vmanhnslpi lkagdeidep sererlrtvl krlgklrcmr escsssftsi
      241 mgylyhvrkc gkgaaelekm tlkchhcgkp yrskaglayh lrsehgpisf fpesgqpecl
      301 kdmslesksg grvqrrsaki avyhlqelas aelakewpkr kvlqdlvpdd rklkytrpgl
      361 ptfsqevlhk wksdikkyhr iqcpnqgcea vyssvsglka hlgsctlgtf vagkykcllc
      421 qkefvsesgv kyhinsvhae dwfvvnpttt ksfeklmkik qrqqeeekrr qqhrsrrslr
      481 rrqqpgielp etepslrvgk dqrrnheell vatsrkepeq epvssqfqkv kspktnhkrg
      541 kk
//
LOCUS       XP_061011043             740 aa            linear   MAM 02-DEC-2023
DEFINITION  kanadaptin [Dama dama].
ACCESSION   XP_061011043
VERSION     XP_061011043.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155060.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..740
                     /product="kanadaptin"
                     /calculated_mol_wt=82647
     Region          <17..111
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          111..221
                     /region_name="FHA_Kanadaptin"
                     /note="forkhead associated (FHA) domain found in
                     kanadaptin and similar proteins; cd22677"
                     /db_xref="CDD:438729"
     Site            order(115,117,119..120,122..123,190..191,203..207,216,
                     218..221)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:438729"
     Site            order(137..139,148,152..153,155,183,185..186,215)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438729"
     Region          308..390
                     /region_name="DSRM_Kanadaptin"
                     /note="double-stranded RNA binding motif of Kanadaptin and
                     similar proteins; cd19856"
                     /db_xref="CDD:380685"
     Site            order(313,316..317,320..321,324..325,369,373)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:380685"
     Region          422..>535
                     /region_name="PLN02939"
                     /note="transferase, transferring glycosyl groups"
                     /db_xref="CDD:215507"
     CDS             1..740
                     /gene="SLC4A1AP"
                     /coded_by="XM_061155060.1:1..2223"
                     /db_xref="GeneID:133064664"
ORIGIN      
        1 madspsqsep lpspelnddf kkpalpvppv aqskaqannp pnpeevkerp talpdsdsge
       61 pdvppalpds getrgpaeeq prphtaapsp ggparappyr eppwggptta pysletlkgg
      121 tilgtrnlkg lscclfgrlp scdvclehps vsryhavlqh rvsgldaegd ghgpgfylyd
      181 lgsthgtfln ktripprtyc rvhvghvlrf ggstrlfllq gpeedreaes eltvtqlkel
      241 rkqqqmmlek kmlgedsdee lemdtaerkr ntssqddemg ctwgmgedav edeaeenpiv
      301 lefqqereaf yikdpkkalq gffdregeel eyefdeqghs twlcrvrlpv ddstgkqlva
      361 eaihsgkkke amiqcsleac rildtlgllr qeavsrkrka knwededfyd sdddtfldrt
      421 glvekkrlnr mkkagkidek petfeslvak lndaekelse iserlkassk alsespsqds
      481 ldafmsemks gsaldgvsrk klhlrtfelr keqqrlkgli kivkpaeipe lkktesqatd
      541 genkakkltl plfgamkggs kfklktgtvg klppkrpelp ptlmrmkdep eveeeeeeee
      601 eeeekekeeh ekkteagssr lqqetepeea vqetsppidf tcsketknhe nmsqlsqveq
      661 nkdyqeisea aasceepsas kneneksrde fkkkkapgpg kvplilssky peddpdycvw
      721 vppegqsgdg rthlndkygy
//
LOCUS       XP_061011044             535 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 121 isoform X1 [Dama dama].
ACCESSION   XP_061011044
VERSION     XP_061011044.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155061.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..535
                     /product="coiled-coil domain-containing protein 121
                     isoform X1"
                     /calculated_mol_wt=61069
     Region          292..497
                     /region_name="DUF4515"
                     /note="Domain of unknown function (DUF4515); pfam14988"
                     /db_xref="CDD:405647"
     CDS             1..535
                     /gene="CCDC121"
                     /coded_by="XM_061155061.1:22..1629"
                     /db_xref="GeneID:133064665"
ORIGIN      
        1 mrlepnktks npaqpaskgr akgrdvhlfl svvirmgaql gtpsgkwrhw edgwkrptke
       61 lltvvgqglg rsklwipggq ddqgpqgppg tpgtpgtpgt trdsratlvk kvrfpvsprg
      121 agnrasgepa vravpsaedv rrlrtarqgt ltgcetqrcl atprsaepss eklgitpvmt
      181 ryfrvlpapk sssrslvvsr kgqnrdigek qsadefvkla edssnslqpd vnfihtflkp
      241 ekltkvekrf kgravmemmk ldkeiketqi rleplvvetr qlleekdhiq kenqffqeyl
      301 tkqteesrqr teklwnyylq qsvkieqrkr eltskyankn salkrellek entlsnlnkq
      361 leamrdisvi kekqdreiek lqqeikkthv etaakkqaml vqffqdkall eaqlselear
      421 esgkkltkel ksknqaleka akqhvsefhs ninrqhqqlq kelpelvqkc hqledthsql
      481 krkqqllqqe hwyveclrrg rqqlqerrnr cpngqgspkt trnpavgtks kvhpk
//
LOCUS       XP_061011045             348 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 121 isoform X2 [Dama dama].
ACCESSION   XP_061011045
VERSION     XP_061011045.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155062.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..348
                     /product="coiled-coil domain-containing protein 121
                     isoform X2"
                     /calculated_mol_wt=41037
     Region          105..310
                     /region_name="DUF4515"
                     /note="Domain of unknown function (DUF4515); pfam14988"
                     /db_xref="CDD:405647"
     CDS             1..348
                     /gene="CCDC121"
                     /coded_by="XM_061155062.1:26..1072"
                     /db_xref="GeneID:133064665"
ORIGIN      
        1 mllaretpat frilnetrtq qnqiessptg qlaedssnsl qpdvnfihtf lkpekltkve
       61 krfkgravme mmkldkeike tqirleplvv etrqlleekd hiqkenqffq eyltkqtees
      121 rqrteklwny ylqqsvkieq rkreltskya nknsalkrel lekentlsnl nkqleamrdi
      181 svikekqdre ieklqqeikk thvetaakkq amlvqffqdk alleaqlsel earesgkklt
      241 kelksknqal ekaakqhvse fhsninrqhq qlqkelpelv qkchqledth sqlkrkqqll
      301 qqehwyvecl rrgrqqlqer rnrcpngqgs pkttrnpavg tkskvhpk
//
LOCUS       XP_061011046             412 aa            linear   MAM 02-DEC-2023
DEFINITION  STAGA complex 65 subunit gamma [Dama dama].
ACCESSION   XP_061011046
VERSION     XP_061011046.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155063.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..412
                     /product="STAGA complex 65 subunit gamma"
                     /calculated_mol_wt=45858
     Region          148..233
                     /region_name="HFD_SUPT7L"
                     /note="histone-fold domain found in Suppressor of Ty
                     7-like (SUPT7L) and similar proteins; cd06847"
                     /db_xref="CDD:467022"
     CDS             1..412
                     /gene="SUPT7L"
                     /coded_by="XM_061155063.1:529..1767"
                     /db_xref="GeneID:133064666"
ORIGIN      
        1 mlrywgeipi sssqtnrssf dllprefrlv evhdpplhqp sankpkpptm ldipsepcsl
       61 tihtiqliqh nrrlrnliat aqaqnqqqte gvkteesepl pscpgspplp ddllpldckn
      121 pnapfqvrhs dpesdfyrgk gepvtelswh scrqllyqav atilahagfe canesvletl
      181 tdvaheyclk ftkllrfavd qeaqlgqtpf pdvmeqvfhe vgigsvlslq kfwqhrikdy
      241 hsymlqiskq lseeyerivn pekatedtkp vkikeepvsd itfpvseele adlasgdqsl
      301 pmgvlgaqse rfpsnlevea spqasstevn aspfwnlahv kmepqeseeg nvsghgvlgs
      361 dvfeepmsgm seagipqspd dsdssygshs tdslmgsspv fnqrckkrmr ki
//
LOCUS       XP_061011047             374 aa            linear   MAM 02-DEC-2023
DEFINITION  GPN-loop GTPase 1 [Dama dama].
ACCESSION   XP_061011047
VERSION     XP_061011047.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155064.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..374
                     /product="GPN-loop GTPase 1"
                     /calculated_mol_wt=41391
     Region          20..258
                     /region_name="GPN1"
                     /note="GPN-loop GTPase 1; cd17870"
                     /db_xref="CDD:349779"
     Site            order(27..34,189..190,192..193,244..246)
                     /site_type="active"
                     /db_xref="CDD:349779"
     CDS             1..374
                     /gene="GPN1"
                     /coded_by="XM_061155064.1:19..1143"
                     /db_xref="GeneID:133064667"
ORIGIN      
        1 maapaaates qasggpqspa cllvlgmags gkttfvqrlt gylhsqgcpp yvinldpavh
       61 evpfpanidi rdtvkykevm kqyglgpngg ivtslnlfat rfdqvmkfie kaqnmskyvl
      121 idtpgqievf twsasgtiit ealassfpti viyvmdtsrs tnpvtfmsnm lyacsilykt
      181 klpfivvmnk tdiidhsfav ewmqdfeafq dalnqettyv snltrsmslv ldefysslrv
      241 vgvsavlgtg leelfvqvss ateeyereyr peyerlkksl asaqsqqqke qlerlqkdmg
      301 svaldtgiaa gssspvldps dliltrgtld eedeeadsdt ddidhrvtee sreepafqnf
      361 mqesmaqywk knnk
//
LOCUS       XP_061011048             250 aa            linear   MAM 02-DEC-2023
DEFINITION  basic proline-rich protein-like [Dama dama].
ACCESSION   XP_061011048
VERSION     XP_061011048.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155065.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..250
                     /product="basic proline-rich protein-like"
                     /calculated_mol_wt=24657
     CDS             1..250
                     /gene="LOC133064668"
                     /coded_by="XM_061155065.1:1..753"
                     /db_xref="GeneID:133064668"
ORIGIN      
        1 msaatsrrpp aqpagpgrre paaaaaaaar ggrgarrrlp arparapspa rperfprrpp
       61 appsppgaqp pctppavrsa ppapcaraqs rppgahpppp ppapcappsa vrsappspap
      121 papppscspd ptdgqrgnpr egglgggapa sgstrlgtrr geldplpeal pqatqaaqva
      181 pgpgaltggp srqlsdrhnp greggppasg iaatcvassl ppqppsglhf plcamgtqhd
      241 qtaspwttkg
//
LOCUS       XP_061011049             337 aa            linear   MAM 02-DEC-2023
DEFINITION  ribokinase isoform X1 [Dama dama].
ACCESSION   XP_061011049
VERSION     XP_061011049.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155066.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..337
                     /product="ribokinase isoform X1"
                     /calculated_mol_wt=35730
     Region          24..301
                     /region_name="D_ribokin_bact"
                     /note="ribokinase; TIGR02152"
                     /db_xref="CDD:274000"
     Site            order(27,29,54..56,59,111,113,123,125,156,267..268,271)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238579"
     Site            order(30,32,37..43,56,110,112..114,120..127,182)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238579"
     Site            order(201,237..239,242,257,263,266,269..270,273,297,
                     300..301)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:238579"
     CDS             1..337
                     /gene="RBKS"
                     /coded_by="XM_061155066.1:25..1038"
                     /db_xref="GeneID:133064669"
ORIGIN      
        1 maasgdpgrq wqeevaeaav vvvgscmtdl vsltsrlpkt getihghkff igfggkganq
       61 cvqaarlgak tsmvckvgkd sfgndyienl kqndisteft yqtkdaatga asiivdnegq
      121 niivivagan lllntedlre aasaisrakv micqlevtpa tslealriah sngvktlfnp
      181 apaiadldpe fytlsdvfcc neseaeiltg levgspteag kaalvllerg cqvviitlga
      241 egcvmlsqte pvpkhiptek vkavdttgag dsfvgalafy layysnlsle emlkrsnfia
      301 aagfllsfll plpsvlshrs sfkisldhdp afsmkyk
//
LOCUS       XP_061011050             324 aa            linear   MAM 02-DEC-2023
DEFINITION  ribokinase isoform X2 [Dama dama].
ACCESSION   XP_061011050
VERSION     XP_061011050.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155067.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..324
                     /product="ribokinase isoform X2"
                     /calculated_mol_wt=34265
     Region          24..320
                     /region_name="D_ribokin_bact"
                     /note="ribokinase; TIGR02152"
                     /db_xref="CDD:274000"
     Site            order(27,29,54..56,59,111,113,123,125,156,267..268,271,
                     309)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238579"
     Site            order(30,32,37..43,56,110,112..114,120..127,182)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238579"
     Site            order(201,237..239,242,257,263,266,269..270,273,297,
                     300..301,304)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:238579"
     CDS             1..324
                     /gene="RBKS"
                     /coded_by="XM_061155067.1:25..999"
                     /db_xref="GeneID:133064669"
ORIGIN      
        1 maasgdpgrq wqeevaeaav vvvgscmtdl vsltsrlpkt getihghkff igfggkganq
       61 cvqaarlgak tsmvckvgkd sfgndyienl kqndisteft yqtkdaatga asiivdnegq
      121 niivivagan lllntedlre aasaisrakv micqlevtpa tslealriah sngvktlfnp
      181 apaiadldpe fytlsdvfcc neseaeiltg levgspteag kaalvllerg cqvviitlga
      241 egcvmlsqte pvpkhiptek vkavdttgag dsfvgalafy layysnlsle emlkrsnfia
      301 avsvqvtgtq ssypykkdlp ldlf
//
LOCUS       XP_061011051             317 aa            linear   MAM 02-DEC-2023
DEFINITION  ribokinase isoform X3 [Dama dama].
ACCESSION   XP_061011051
VERSION     XP_061011051.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155068.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..317
                     /product="ribokinase isoform X3"
                     /calculated_mol_wt=33881
     Region          12..281
                     /region_name="D_ribokin_bact"
                     /note="ribokinase; TIGR02152"
                     /db_xref="CDD:274000"
     Site            order(17..23,36,90,92..94,100..107,162)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238579"
     Site            order(34..36,39,91,93,103,105,136,247..248,251)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238579"
     Site            order(181,217..219,222,237,243,246,249..250,253,277,
                     280..281)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:238579"
     CDS             1..317
                     /gene="RBKS"
                     /coded_by="XM_061155068.1:131..1084"
                     /db_xref="GeneID:133064669"
ORIGIN      
        1 mpykgdmekr csltsrlpkt getihghkff igfggkganq cvqaarlgak tsmvckvgkd
       61 sfgndyienl kqndisteft yqtkdaatga asiivdnegq niivivagan lllntedlre
      121 aasaisrakv micqlevtpa tslealriah sngvktlfnp apaiadldpe fytlsdvfcc
      181 neseaeiltg levgspteag kaalvllerg cqvviitlga egcvmlsqte pvpkhiptek
      241 vkavdttgag dsfvgalafy layysnlsle emlkrsnfia aagfllsfll plpsvlshrs
      301 sfkisldhdp afsmkyk
//
LOCUS       XP_061011052             307 aa            linear   MAM 02-DEC-2023
DEFINITION  ribokinase isoform X4 [Dama dama].
ACCESSION   XP_061011052
VERSION     XP_061011052.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155069.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..307
                     /product="ribokinase isoform X4"
                     /calculated_mol_wt=32372
     Region          24..301
                     /region_name="D_ribokin_bact"
                     /note="ribokinase; TIGR02152"
                     /db_xref="CDD:274000"
     Site            order(27,29,54..56,59,111,113,123,125,156,267..268,271)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238579"
     Site            order(30,32,37..43,56,110,112..114,120..127,182)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238579"
     Site            order(201,237..239,242,257,263,266,269..270,273,297,
                     300..301)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:238579"
     CDS             1..307
                     /gene="RBKS"
                     /coded_by="XM_061155069.1:25..948"
                     /db_xref="GeneID:133064669"
ORIGIN      
        1 maasgdpgrq wqeevaeaav vvvgscmtdl vsltsrlpkt getihghkff igfggkganq
       61 cvqaarlgak tsmvckvgkd sfgndyienl kqndisteft yqtkdaatga asiivdnegq
      121 niivivagan lllntedlre aasaisrakv micqlevtpa tslealriah sngvktlfnp
      181 apaiadldpe fytlsdvfcc neseaeiltg levgspteag kaalvllerg cqvviitlga
      241 egcvmlsqte pvpkhiptek vkavdttgag dsfvgalafy layysnlsle emlkrsnfia
      301 atpqnsf
//
LOCUS       XP_061011053              65 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein bL33m [Dama dama].
ACCESSION   XP_061011053
VERSION     XP_061011053.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155070.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..65
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..65
                     /product="large ribosomal subunit protein bL33m"
                     /calculated_mol_wt=7359
     Region          17..60
                     /region_name="Ribosomal_L33"
                     /note="Ribosomal protein L33; pfam00471"
                     /db_xref="CDD:425701"
     CDS             1..65
                     /gene="MRPL33"
                     /coded_by="XM_061155070.1:100..297"
                     /db_xref="GeneID:133064670"
ORIGIN      
        1 mflsavtfak sksktilvkm vsqagtgfsf ntkrsrlwek ltllhydpvv kkkvlfveqk
       61 kirsl
//
LOCUS       XP_061011054             383 aa            linear   MAM 02-DEC-2023
DEFINITION  BRISC and BRCA1-A complex member 2 [Dama dama].
ACCESSION   XP_061011054
VERSION     XP_061011054.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155071.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..383
                     /product="BRISC and BRCA1-A complex member 2"
                     /calculated_mol_wt=43358
     Region          10..378
                     /region_name="BRE"
                     /note="BRCA1-A and BRISC complex subunit BRE; cd23664"
                     /db_xref="CDD:467821"
     Site            order(18..19,26,31,33,41..44,55,57,68,70,72,74..75,79..87,
                     91,93..96,99,102..103,105,181..187,196..200,202,217..224,
                     226,232,235..239,262,265..266,268,272,275..277,279..283,
                     285..292,294,296,298,300..303,305..309,311,328..333,
                     340..341,356,360,363,366..367,370)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467821"
     CDS             1..383
                     /gene="BABAM2"
                     /coded_by="XM_061155071.1:50..1201"
                     /db_xref="GeneID:133064671"
ORIGIN      
        1 mspevalnri spmlspfiss vvrngkvgld atnclritdl ksgctsltpg pncdrfklhi
       61 pyagetlkwd iifnaqypel ppdfifgeda eflpdpsalh nlaswnpsnp eclllvvkel
      121 vqqyhqfqcs rlressrlmf eyqtlleepq yggnmeiyag kknnwtgefs arfllklpvd
      181 fsniptyllk dvnedpgedv allsvsfedt eatqvypkly lspriehalg gssalhipaf
      241 pgggclidyv pqvchlltnk vqyviqgyhk rreyiaafls hfgtgvveyd aegftkltll
      301 lmwkdfcflv hidlplffpr dqptltfqsv yhftnsgqly sqaqknypys prwdgnemak
      361 rakayfktfv pqfqeaafan gkl
//
LOCUS       XP_061011055             383 aa            linear   MAM 02-DEC-2023
DEFINITION  BRISC and BRCA1-A complex member 2 [Dama dama].
ACCESSION   XP_061011055
VERSION     XP_061011055.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155072.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..383
                     /product="BRISC and BRCA1-A complex member 2"
                     /calculated_mol_wt=43358
     Region          10..378
                     /region_name="BRE"
                     /note="BRCA1-A and BRISC complex subunit BRE; cd23664"
                     /db_xref="CDD:467821"
     Site            order(18..19,26,31,33,41..44,55,57,68,70,72,74..75,79..87,
                     91,93..96,99,102..103,105,181..187,196..200,202,217..224,
                     226,232,235..239,262,265..266,268,272,275..277,279..283,
                     285..292,294,296,298,300..303,305..309,311,328..333,
                     340..341,356,360,363,366..367,370)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467821"
     CDS             1..383
                     /gene="BABAM2"
                     /coded_by="XM_061155072.1:148..1299"
                     /db_xref="GeneID:133064671"
ORIGIN      
        1 mspevalnri spmlspfiss vvrngkvgld atnclritdl ksgctsltpg pncdrfklhi
       61 pyagetlkwd iifnaqypel ppdfifgeda eflpdpsalh nlaswnpsnp eclllvvkel
      121 vqqyhqfqcs rlressrlmf eyqtlleepq yggnmeiyag kknnwtgefs arfllklpvd
      181 fsniptyllk dvnedpgedv allsvsfedt eatqvypkly lspriehalg gssalhipaf
      241 pgggclidyv pqvchlltnk vqyviqgyhk rreyiaafls hfgtgvveyd aegftkltll
      301 lmwkdfcflv hidlplffpr dqptltfqsv yhftnsgqly sqaqknypys prwdgnemak
      361 rakayfktfv pqfqeaafan gkl
//
LOCUS       XP_061011056             327 aa            linear   MAM 02-DEC-2023
DEFINITION  fos-related antigen 2 [Dama dama].
ACCESSION   XP_061011056
VERSION     XP_061011056.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155073.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..327
                     /product="fos-related antigen 2"
                     /calculated_mol_wt=35052
     Region          134..187
                     /region_name="bZIP_Fos"
                     /note="Basic leucine zipper (bZIP) domain of the oncogene
                     Fos (Fos): a DNA-binding and dimerization domain; cd14721"
                     /db_xref="CDD:269869"
     Region          134..186
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269869"
     Site            order(145,148..149,152..153,155..156,159..160,162..163,
                     166..167,169..170,173..174,176..177,180..181,183..184)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269869"
     CDS             1..327
                     /gene="FOSL2"
                     /coded_by="XM_061155073.1:776..1759"
                     /db_xref="GeneID:133064673"
ORIGIN      
        1 myqdypgnfd tssrgssgsp ahaesyssgg ggqqkfrvdm pgsgsafipt inaittsqdl
       61 qwmvqptvit smsspyprsh pysplpglas vpghmalprp gviktigttv grrrrdeqls
      121 peeeekrrir rernklaaak crnrrrelte klqaeteele eeksglqkei aelqkekekl
      181 efmlvahgpv ckispeerrs ppasglqslr ggasggvgav vvkqepleed spssssagld
      241 kaqrsvikpi siaggfygee plhtpivvts tpaitpgtsn lvftypsvle qespaspses
      301 cskahrrsss sgdqssdsln sptllal
//
LOCUS       XP_061011057            1461 aa            linear   MAM 02-DEC-2023
DEFINITION  phospholipase B1, membrane-associated [Dama dama].
ACCESSION   XP_061011057
VERSION     XP_061011057.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155074.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1461
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1461
                     /product="phospholipase B1, membrane-associated"
                     /calculated_mol_wt=162003
     Region          66..320
                     /region_name="SGNH_hydrolase"
                     /note="or GDSL_hydrolase, is a diverse family of lipases
                     and esterases. The tertiary fold of the enzyme is
                     substantially different from that of the alpha/beta
                     hydrolase family and unique among all known hydrolases;
                     its active site closely resembles the typical...; cl01053"
                     /db_xref="CDD:470049"
     Region          385..680
                     /region_name="Phospholipase_B_like"
                     /note="Phospholipase-B_like. This subgroup of the
                     SGNH-family of lipolytic enzymes may have both esterase
                     and phospholipase-A/lysophospholipase activity. It's
                     members may be involved in the conversion of
                     phosphatidylcholine to fatty acids and...; cd01824"
                     /db_xref="CDD:238862"
     Site            order(403,456,516,655,658)
                     /site_type="active"
                     /db_xref="CDD:238862"
     Site            order(403,655,658)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238862"
     Site            order(403,456,516)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238862"
     Region          732..1027
                     /region_name="Phospholipase_B_like"
                     /note="Phospholipase-B_like. This subgroup of the
                     SGNH-family of lipolytic enzymes may have both esterase
                     and phospholipase-A/lysophospholipase activity. It's
                     members may be involved in the conversion of
                     phosphatidylcholine to fatty acids and...; cd01824"
                     /db_xref="CDD:238862"
     Site            order(750,803,863,1002,1005)
                     /site_type="active"
                     /db_xref="CDD:238862"
     Site            order(750,1002,1005)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238862"
     Site            order(750,803,863)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238862"
     Region          1088..1374
                     /region_name="Phospholipase_B_like"
                     /note="Phospholipase-B_like. This subgroup of the
                     SGNH-family of lipolytic enzymes may have both esterase
                     and phospholipase-A/lysophospholipase activity. It's
                     members may be involved in the conversion of
                     phosphatidylcholine to fatty acids and...; cd01824"
                     /db_xref="CDD:238862"
     Site            order(1106,1157,1214,1349,1352)
                     /site_type="active"
                     /db_xref="CDD:238862"
     Site            order(1106,1349,1352)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238862"
     Site            order(1106,1157,1214)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238862"
     CDS             1..1461
                     /gene="PLB1"
                     /coded_by="XM_061155074.1:62..4447"
                     /db_xref="GeneID:133064674"
ORIGIN      
        1 mgllpcafll glllllgqgt tqahtspgen tlkehlwpeg qslksfsffc npenvpspgs
       61 tvpsnsvhsl rpsdikfvaa ignppdsgtd dleeqewtek qepqtcmgvv tvlsevirhf
      121 spsvlkpica lgtgvvrrda tedlwiqakd lvrnmkenqq ldfqndwkli nvffsnasqc
      181 hlcsstqqqr hvtssmdqlt rildylhqev pkafvnlvdl sealrgshwh qktllsptaq
      241 tctcsgensr lssvvtqway qetwerllas skyneqesfa vvfqpffcer alpppsgerp
      301 fqdptalglt lwnsmmqpag qkdepfsake rrplkcpsqe npylftyrns nylprmlkpq
      361 vkievrdgae ircsdkdpsd tvptsvhrlk ladikvigal gdsltagnga gskpgnvldv
      421 ltqyrglsws vggdqnlssv itlpnmlref npslkgfsvg kgressagay lnqavagara
      481 edlpvqarrl vdlmkndvni nfqedwkiit lfiggndlcd vcddpvrysp qnfvgnigqa
      541 ldilhaevpr afvnlvkvle iinlrqlyqd knvscprlil rnlcpcvlky ddnatelasl
      601 vevnkqyqeg thqlvesgry dtredftvvv qpffekvdmp ktpeglpdns yfapdcfhfs
      661 skahahaasa lwnnmlqpvg qktrqhnfed kinitcpdqa rpflstyknl vqdqgsqllc
      721 sdrapsaspp tsvhtlrpad iqvvaalgds ltagngigsk pddlsdvttq yrglsyssgg
      781 dsslenvttl pnilrkfngn ltgyavgtgd anetnaflnq avpgakaeel vsqvqtliqk
      841 mksdhrvnfh edwkvitvli ggsdlcdyct dsnlysaanf fdhlrnaldi lhrevpralv
      901 nlvdfmspsv mrqvflgnpd kcpvhqasil cncvltpres sqelaklesi trayqssmre
      961 lvesgrydtr edfsvvlqpf fynirlpvla dgrpdvsffa pdclhpsqkf hsqlsralwv
     1021 nmleplgrkt dtldltadip lscpaqvepl lrtprnsnyt ypttpaienw gsdflcteqn
     1081 psnsvptsvh klrpadikvv aalgdsltta vgarpsnssd lptswrglsw siggdgdlgt
     1141 httlpnilkk fnpnilgfst gtreetagln vategarard mpaqardlve rmktspeinl
     1201 qkdwklitlf igsndlchyc dnqearsaee yvkyirqald ilyeqlprtf invvevmela
     1261 dlhqgqdgkc vmplaaqsnc tclqgsqenl pemqelktvn wdfqsalstl syqylqredf
     1321 avvvqpffqn tlvplnkrgg adltffsedc fhfserghae maialwnnml epvghkttsn
     1381 nftysrtklk cpsaenpylr tlknsqllqe qadaeppvls wavpvaaggg lvvgvgavmt
     1441 wralrgrqke nsplslntms f
//
LOCUS       XP_061011059             482 aa            linear   MAM 02-DEC-2023
DEFINITION  tRNA (adenine(58)-N(1))-methyltransferase, mitochondrial [Dama
            dama].
ACCESSION   XP_061011059
VERSION     XP_061011059.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155076.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..482
                     /product="tRNA (adenine(58)-N(1))-methyltransferase,
                     mitochondrial"
                     /calculated_mol_wt=53538
     Region          174..476
                     /region_name="Gcd14"
                     /note="tRNA A58 N-methylase Trm61 [Translation, ribosomal
                     structure and biogenesis]; COG2519"
                     /db_xref="CDD:442009"
     CDS             1..482
                     /gene="TRMT61B"
                     /coded_by="XM_061155076.1:24..1472"
                     /db_xref="GeneID:133064678"
ORIGIN      
        1 mlstrcvglv llplrrlqsf pgfrtslflr rlgqesferg rllcfkaspr dtgddegere
       61 aaqrkapgad sppslpprvr glgtrclssl eslglptpre esppqesegs sgdqgqsdpa
      121 hpgsgspsvp alvqpatkde ilhvssswsa srvvpfrvge lilaetgkre tqfkklfrls
      181 naghlnsnwg tvpfseivgk fpgqilrsss gkhfmlrrpa ledyvllmqr gpaitypkdi
      241 nmilsmmnih pgdtvleags gsggmslfls kavgsqgrvi sfeirkdhhk lamknyrhwr
      301 dswkishvee wpdnvdfihk dilgatedik sltfdavald mlnpqvalpv lfpnlkqggi
      361 cavylanitq vielldgiri celalsceki sevivrdwlv clarqkngil aqkvepkint
      421 dlqvhsqeki riegemfqyd dheeshsdfp ygsfpyiarp ihwqightaf lvklrkckpq
      481 ln
//
LOCUS       XP_061011060             370 aa            linear   MAM 02-DEC-2023
DEFINITION  speedy protein A isoform X1 [Dama dama].
ACCESSION   XP_061011060
VERSION     XP_061011060.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155077.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..370
                     /product="speedy protein A isoform X1"
                     /calculated_mol_wt=42776
     Region          127..257
                     /region_name="Spy1"
                     /note="Cell cycle regulatory protein; pfam11357"
                     /db_xref="CDD:463263"
     CDS             1..370
                     /gene="SPDYA"
                     /coded_by="XM_061155077.1:241..1353"
                     /db_xref="GeneID:133064679"
ORIGIN      
        1 mceamaaasr plphtlppls ffrcrrevse dqegesvpns lnieggttaw vpeswetkmr
       61 hnqlccetpp tvtvhvksgs nrfhqpkkpi tlkrpifkds wpaseknahn snkskrpkgp
      121 clviqrqemt affklfdddl iqdflwmdcc ckiadkylla mtfvyfkrak ftvnehtrin
      181 ffialylant veedeeesky eifpwalgkn wrklfpdflk lrdqlwdrid yraivsrrcc
      241 eevmaiapth yiwqrersvh hsgavrnynr devqlprgps atpvdcslcg kkgryvrlgl
      301 ssssssssdt vevvekhsqe shnsfsmdki vdtsqaysys qandhrsnke kktnfmkkdk
      361 smewftgsee
//
LOCUS       XP_061011061             344 aa            linear   MAM 02-DEC-2023
DEFINITION  speedy protein A isoform X2 [Dama dama].
ACCESSION   XP_061011061
VERSION     XP_061011061.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155078.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..344
                     /product="speedy protein A isoform X2"
                     /calculated_mol_wt=40079
     Region          101..231
                     /region_name="Spy1"
                     /note="Cell cycle regulatory protein; pfam11357"
                     /db_xref="CDD:463263"
     CDS             1..344
                     /gene="SPDYA"
                     /coded_by="XM_061155078.1:224..1258"
                     /db_xref="GeneID:133064679"
ORIGIN      
        1 mceamaaasr plphtlppls ffrcrweswe tkmrhnqlcc etpptvtvhv ksgsnrfhqp
       61 kkpitlkrpi fkdswpasek nahnsnkskr pkgpclviqr qemtaffklf dddliqdflw
      121 mdccckiadk yllamtfvyf krakftvneh trinffialy lantveedee eskyeifpwa
      181 lgknwrklfp dflklrdqlw dridyraivs rrcceevmai apthyiwqre rsvhhsgavr
      241 nynrdevqlp rgpsatpvdc slcgkkgryv rlglssssss ssdtvevvek hsqeshnsfs
      301 mdkivdtsqa ysysqandhr snkekktnfm kkdksmewft gsee
//
LOCUS       XP_061011062             312 aa            linear   MAM 02-DEC-2023
DEFINITION  speedy protein A isoform X3 [Dama dama].
ACCESSION   XP_061011062
VERSION     XP_061011062.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155079.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..312
                     /product="speedy protein A isoform X3"
                     /calculated_mol_wt=36346
     Region          69..199
                     /region_name="Spy1"
                     /note="Cell cycle regulatory protein; pfam11357"
                     /db_xref="CDD:463263"
     CDS             1..312
                     /gene="SPDYA"
                     /coded_by="XM_061155079.1:998..1936"
                     /db_xref="GeneID:133064679"
ORIGIN      
        1 mrhnqlccet pptvtvhvks gsnrfhqpkk pitlkrpifk dswpasekna hnsnkskrpk
       61 gpclviqrqe mtaffklfdd dliqdflwmd ccckiadkyl lamtfvyfkr akftvnehtr
      121 inffialyla ntveedeees kyeifpwalg knwrklfpdf lklrdqlwdr idyraivsrr
      181 cceevmaiap thyiwqrers vhhsgavrny nrdevqlprg psatpvdcsl cgkkgryvrl
      241 glssssssss dtvevvekhs qeshnsfsmd kivdtsqays ysqandhrsn kekktnfmkk
      301 dksmewftgs ee
//
LOCUS       XP_061011063             312 aa            linear   MAM 02-DEC-2023
DEFINITION  speedy protein A isoform X3 [Dama dama].
ACCESSION   XP_061011063
VERSION     XP_061011063.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155080.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..312
                     /product="speedy protein A isoform X3"
                     /calculated_mol_wt=36346
     Region          69..199
                     /region_name="Spy1"
                     /note="Cell cycle regulatory protein; pfam11357"
                     /db_xref="CDD:463263"
     CDS             1..312
                     /gene="SPDYA"
                     /coded_by="XM_061155080.1:220..1158"
                     /db_xref="GeneID:133064679"
ORIGIN      
        1 mrhnqlccet pptvtvhvks gsnrfhqpkk pitlkrpifk dswpasekna hnsnkskrpk
       61 gpclviqrqe mtaffklfdd dliqdflwmd ccckiadkyl lamtfvyfkr akftvnehtr
      121 inffialyla ntveedeees kyeifpwalg knwrklfpdf lklrdqlwdr idyraivsrr
      181 cceevmaiap thyiwqrers vhhsgavrny nrdevqlprg psatpvdcsl cgkkgryvrl
      241 glssssssss dtvevvekhs qeshnsfsmd kivdtsqays ysqandhrsn kekktnfmkk
      301 dksmewftgs ee
//
LOCUS       XP_061011064             312 aa            linear   MAM 02-DEC-2023
DEFINITION  speedy protein A isoform X3 [Dama dama].
ACCESSION   XP_061011064
VERSION     XP_061011064.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155081.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..312
                     /product="speedy protein A isoform X3"
                     /calculated_mol_wt=36346
     Region          69..199
                     /region_name="Spy1"
                     /note="Cell cycle regulatory protein; pfam11357"
                     /db_xref="CDD:463263"
     CDS             1..312
                     /gene="SPDYA"
                     /coded_by="XM_061155081.1:1180..2118"
                     /db_xref="GeneID:133064679"
ORIGIN      
        1 mrhnqlccet pptvtvhvks gsnrfhqpkk pitlkrpifk dswpasekna hnsnkskrpk
       61 gpclviqrqe mtaffklfdd dliqdflwmd ccckiadkyl lamtfvyfkr akftvnehtr
      121 inffialyla ntveedeees kyeifpwalg knwrklfpdf lklrdqlwdr idyraivsrr
      181 cceevmaiap thyiwqrers vhhsgavrny nrdevqlprg psatpvdcsl cgkkgryvrl
      241 glssssssss dtvevvekhs qeshnsfsmd kivdtsqays ysqandhrsn kekktnfmkk
      301 dksmewftgs ee
//
LOCUS       XP_061011065             312 aa            linear   MAM 02-DEC-2023
DEFINITION  speedy protein A isoform X3 [Dama dama].
ACCESSION   XP_061011065
VERSION     XP_061011065.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155082.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..312
                     /product="speedy protein A isoform X3"
                     /calculated_mol_wt=36346
     Region          69..199
                     /region_name="Spy1"
                     /note="Cell cycle regulatory protein; pfam11357"
                     /db_xref="CDD:463263"
     CDS             1..312
                     /gene="SPDYA"
                     /coded_by="XM_061155082.1:402..1340"
                     /db_xref="GeneID:133064679"
ORIGIN      
        1 mrhnqlccet pptvtvhvks gsnrfhqpkk pitlkrpifk dswpasekna hnsnkskrpk
       61 gpclviqrqe mtaffklfdd dliqdflwmd ccckiadkyl lamtfvyfkr akftvnehtr
      121 inffialyla ntveedeees kyeifpwalg knwrklfpdf lklrdqlwdr idyraivsrr
      181 cceevmaiap thyiwqrers vhhsgavrny nrdevqlprg psatpvdcsl cgkkgryvrl
      241 glssssssss dtvevvekhs qeshnsfsmd kivdtsqays ysqandhrsn kekktnfmkk
      301 dksmewftgs ee
//
LOCUS       XP_061011066             312 aa            linear   MAM 02-DEC-2023
DEFINITION  speedy protein A isoform X3 [Dama dama].
ACCESSION   XP_061011066
VERSION     XP_061011066.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155083.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..312
                     /product="speedy protein A isoform X3"
                     /calculated_mol_wt=36346
     Region          69..199
                     /region_name="Spy1"
                     /note="Cell cycle regulatory protein; pfam11357"
                     /db_xref="CDD:463263"
     CDS             1..312
                     /gene="SPDYA"
                     /coded_by="XM_061155083.1:3926..4864"
                     /db_xref="GeneID:133064679"
ORIGIN      
        1 mrhnqlccet pptvtvhvks gsnrfhqpkk pitlkrpifk dswpasekna hnsnkskrpk
       61 gpclviqrqe mtaffklfdd dliqdflwmd ccckiadkyl lamtfvyfkr akftvnehtr
      121 inffialyla ntveedeees kyeifpwalg knwrklfpdf lklrdqlwdr idyraivsrr
      181 cceevmaiap thyiwqrers vhhsgavrny nrdevqlprg psatpvdcsl cgkkgryvrl
      241 glssssssss dtvevvekhs qeshnsfsmd kivdtsqays ysqandhrsn kekktnfmkk
      301 dksmewftgs ee
//
LOCUS       XP_061011067             327 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein phosphatase PP1-beta catalytic subunit
            [Dama dama].
ACCESSION   XP_061011067
VERSION     XP_061011067.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155084.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..327
                     /product="serine/threonine-protein phosphatase PP1-beta
                     catalytic subunit"
                     /calculated_mol_wt=37056
     Region          7..297
                     /region_name="MPP_PP1_PPKL"
                     /note="PP1, PPKL (PP1 and kelch-like) enzymes, and related
                     proteins, metallophosphatase domain; cd07414"
                     /db_xref="CDD:277359"
     Site            order(63,65,91,95,123..124,128..129,133,172,194..196,205,
                     219..221,247,271..275)
                     /site_type="active"
                     /db_xref="CDD:277359"
     Site            order(63,65,91,123,172,247)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277359"
     Site            order(95,128..129,133,194..196,205,219..221,271..275)
                     /site_type="other"
                     /note="natural toxin binding site [chemical binding]"
                     /db_xref="CDD:277359"
     Site            order(178,180,197,202,215,224,232..233,235..237,239..241,
                     256,260,287..288,290,292,294)
                     /site_type="other"
                     /note="MYPT1 binding site [polypeptide binding]"
                     /db_xref="CDD:277359"
     CDS             1..327
                     /gene="PPP1CB"
                     /coded_by="XM_061155084.1:136..1119"
                     /db_xref="GeneID:133064682"
ORIGIN      
        1 madgelnvds litrllevrg crpgkivqmt eaevrglcik sreiflsqpi lleleaplki
       61 cgdihgqytd llrlfeyggf ppeanylflg dyvdrgkqsl eticlllayk ikypenffll
      121 rgnhecasin riygfydeck rrfniklwkt ftdcfnclpi aaivdekifc chgglspdlq
      181 smeqirrimr ptdvpdtgll cdllwsdpdk dvqgwgendr gvsftfgadv vskflnrhdl
      241 dlicrahqvv edgyeffakr qlvtlfsapn ycgefdnagg mmsvdetlmc sfqilkpsek
      301 kakyqyggln sgrpvtpprt anppkkr
//
LOCUS       XP_061011068             327 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein phosphatase PP1-beta catalytic subunit
            [Dama dama].
ACCESSION   XP_061011068
VERSION     XP_061011068.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155085.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..327
                     /product="serine/threonine-protein phosphatase PP1-beta
                     catalytic subunit"
                     /calculated_mol_wt=37056
     Region          7..297
                     /region_name="MPP_PP1_PPKL"
                     /note="PP1, PPKL (PP1 and kelch-like) enzymes, and related
                     proteins, metallophosphatase domain; cd07414"
                     /db_xref="CDD:277359"
     Site            order(63,65,91,95,123..124,128..129,133,172,194..196,205,
                     219..221,247,271..275)
                     /site_type="active"
                     /db_xref="CDD:277359"
     Site            order(63,65,91,123,172,247)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277359"
     Site            order(95,128..129,133,194..196,205,219..221,271..275)
                     /site_type="other"
                     /note="natural toxin binding site [chemical binding]"
                     /db_xref="CDD:277359"
     Site            order(178,180,197,202,215,224,232..233,235..237,239..241,
                     256,260,287..288,290,292,294)
                     /site_type="other"
                     /note="MYPT1 binding site [polypeptide binding]"
                     /db_xref="CDD:277359"
     CDS             1..327
                     /gene="PPP1CB"
                     /coded_by="XM_061155085.1:158..1141"
                     /db_xref="GeneID:133064682"
ORIGIN      
        1 madgelnvds litrllevrg crpgkivqmt eaevrglcik sreiflsqpi lleleaplki
       61 cgdihgqytd llrlfeyggf ppeanylflg dyvdrgkqsl eticlllayk ikypenffll
      121 rgnhecasin riygfydeck rrfniklwkt ftdcfnclpi aaivdekifc chgglspdlq
      181 smeqirrimr ptdvpdtgll cdllwsdpdk dvqgwgendr gvsftfgadv vskflnrhdl
      241 dlicrahqvv edgyeffakr qlvtlfsapn ycgefdnagg mmsvdetlmc sfqilkpsek
      301 kakyqyggln sgrpvtpprt anppkkr
//
LOCUS       XP_061011069             327 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein phosphatase PP1-beta catalytic subunit
            [Dama dama].
ACCESSION   XP_061011069
VERSION     XP_061011069.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155086.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..327
                     /product="serine/threonine-protein phosphatase PP1-beta
                     catalytic subunit"
                     /calculated_mol_wt=37056
     Region          7..297
                     /region_name="MPP_PP1_PPKL"
                     /note="PP1, PPKL (PP1 and kelch-like) enzymes, and related
                     proteins, metallophosphatase domain; cd07414"
                     /db_xref="CDD:277359"
     Site            order(63,65,91,95,123..124,128..129,133,172,194..196,205,
                     219..221,247,271..275)
                     /site_type="active"
                     /db_xref="CDD:277359"
     Site            order(63,65,91,123,172,247)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277359"
     Site            order(95,128..129,133,194..196,205,219..221,271..275)
                     /site_type="other"
                     /note="natural toxin binding site [chemical binding]"
                     /db_xref="CDD:277359"
     Site            order(178,180,197,202,215,224,232..233,235..237,239..241,
                     256,260,287..288,290,292,294)
                     /site_type="other"
                     /note="MYPT1 binding site [polypeptide binding]"
                     /db_xref="CDD:277359"
     CDS             1..327
                     /gene="PPP1CB"
                     /coded_by="XM_061155086.1:174..1157"
                     /db_xref="GeneID:133064682"
ORIGIN      
        1 madgelnvds litrllevrg crpgkivqmt eaevrglcik sreiflsqpi lleleaplki
       61 cgdihgqytd llrlfeyggf ppeanylflg dyvdrgkqsl eticlllayk ikypenffll
      121 rgnhecasin riygfydeck rrfniklwkt ftdcfnclpi aaivdekifc chgglspdlq
      181 smeqirrimr ptdvpdtgll cdllwsdpdk dvqgwgendr gvsftfgadv vskflnrhdl
      241 dlicrahqvv edgyeffakr qlvtlfsapn ycgefdnagg mmsvdetlmc sfqilkpsek
      301 kakyqyggln sgrpvtpprt anppkkr
//
LOCUS       XP_061011070             681 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 43 [Dama dama].
ACCESSION   XP_061011070
VERSION     XP_061011070.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155087.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..681
                     /product="WD repeat-containing protein 43"
                     /calculated_mol_wt=75501
     Region          19..57
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <20..300
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          63..124
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          129..165
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          172..205
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          211..265
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          273..320
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          473..577
                     /region_name="Utp12"
                     /note="Dip2/Utp12 Family; pfam04003"
                     /db_xref="CDD:461125"
     CDS             1..681
                     /gene="WDR43"
                     /coded_by="XM_061155087.1:38..2083"
                     /db_xref="GeneID:133064684"
ORIGIN      
        1 maaggggvad plspagvpca fspqsqtyfa lastdghlrv wetannrlhq eyvpsahlsg
       61 tctclawapa rlqakegpqr kkrksevigt snqadllalg tavgsillys tvkgelhskl
      121 isgghdnrvn ciqwhqdngc lyscsddkhi vewntqtckv kckwkgdnss vsslcispdg
      181 kmllsagrti klwvletkev yrhftghatp vssltfttir ppnesqpfdg itglyflsga
      241 vhdrllnvwq vrsenkekna vmsftvtdep vfidltlsen keepvklavv crdgqvhlfe
      301 hilngyckkp ltsnctiqia tpgkgkkstp kpipilaagf csdkmslllv ygnwfqpiie
      361 rlalnskeph mclirdisnc wapkvetait kvrtpvmnse akvlvpgipg hhaaikpapp
      421 qtkeveskrk lgekevsiee rlgaldiatk kekddlpqtn sfpvlltqgl esndfeilnk
      481 vlqtrnlnli krtvlrmplh avipllqelt krlqghpnsa ilmvqwlkcv ltvhasylst
      541 lpdlvpqlgt lyqlmesrvk tfqklshlhg klillitqvt asektkemtc paqkaklvye
      601 eesseeesdd eiadkdsddn wdededekas ekdedvdeen eeeegddeek deengedrdv
      661 asekelngds dldpenesee e
//
LOCUS       XP_061011071             704 aa            linear   MAM 02-DEC-2023
DEFINITION  CAP-Gly domain-containing linker protein 4 [Dama dama].
ACCESSION   XP_061011071
VERSION     XP_061011071.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155088.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..704
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..704
                     /product="CAP-Gly domain-containing linker protein 4"
                     /calculated_mol_wt=75933
     Region          <84..>225
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          109..146
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          153..184
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          186..217
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          285..349
                     /region_name="CAP_GLY"
                     /note="CAP-Gly domain; pfam01302"
                     /db_xref="CDD:460154"
     Region          486..550
                     /region_name="CAP_GLY"
                     /note="CAP-Gly domain; pfam01302"
                     /db_xref="CDD:460154"
     Region          625..689
                     /region_name="CAP_GLY"
                     /note="CAP-Gly domain; pfam01302"
                     /db_xref="CDD:460154"
     CDS             1..704
                     /gene="CLIP4"
                     /coded_by="XM_061155088.1:159..2273"
                     /db_xref="GeneID:133064686"
ORIGIN      
        1 mtiedlpdfp legssligky pflfqgsdtp vifsisaapm psdcefsffd pndtscqeil
       61 fdpktsvsel failrqwvpq vqqnidvign eilkrgcnvn drdgltdmtl lhytcksgah
      121 gigdvdtavk fatqlidlga dvslrsrwtn mnalhyaayf dvpelirvil ktskpkdvda
      181 tcsdfnfgta lhiaaynlca gtvkcllehg anpafrndkg qipadvvpdp vemplemada
      241 aatakeikqm lldaaplscd lskpllpnyd rvtskamlts lglklgdrvv iagqkvgtlr
      301 fcgttefasg qwagieldep egknngsvgk vqyfkcapry gifaplskis kakdrrknia
      361 htpstkagpl irsqkidvah vtskvntglm tskkdsases tlslppgeel ktgaekdvpl
      421 igsisssssi sslehkqsls knlnargnnk ktmnkspsls srasaglnss aasvansgrc
      481 egdlrigdrv lvagqrigti kffgttnfap gywygielek phgkndgsvg gvqyfscspr
      541 ygifappsrv qrvtdsldtl seissnkqnh sypgfrrsfs ttsassqkei nrrnafaksk
      601 ptlhrswsss mtagglegsv klhegsqvll tssnematvr yvgptdfasg iwlglelrsp
      661 kgkndgavgd kryftckpnh gvlvrpsrvt yrgingsklv denc
//
LOCUS       XP_061011072             704 aa            linear   MAM 02-DEC-2023
DEFINITION  CAP-Gly domain-containing linker protein 4 [Dama dama].
ACCESSION   XP_061011072
VERSION     XP_061011072.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155089.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..704
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..704
                     /product="CAP-Gly domain-containing linker protein 4"
                     /calculated_mol_wt=75933
     Region          <84..>225
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          109..146
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          153..184
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          186..217
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          285..349
                     /region_name="CAP_GLY"
                     /note="CAP-Gly domain; pfam01302"
                     /db_xref="CDD:460154"
     Region          486..550
                     /region_name="CAP_GLY"
                     /note="CAP-Gly domain; pfam01302"
                     /db_xref="CDD:460154"
     Region          625..689
                     /region_name="CAP_GLY"
                     /note="CAP-Gly domain; pfam01302"
                     /db_xref="CDD:460154"
     CDS             1..704
                     /gene="CLIP4"
                     /coded_by="XM_061155089.1:264..2378"
                     /db_xref="GeneID:133064686"
ORIGIN      
        1 mtiedlpdfp legssligky pflfqgsdtp vifsisaapm psdcefsffd pndtscqeil
       61 fdpktsvsel failrqwvpq vqqnidvign eilkrgcnvn drdgltdmtl lhytcksgah
      121 gigdvdtavk fatqlidlga dvslrsrwtn mnalhyaayf dvpelirvil ktskpkdvda
      181 tcsdfnfgta lhiaaynlca gtvkcllehg anpafrndkg qipadvvpdp vemplemada
      241 aatakeikqm lldaaplscd lskpllpnyd rvtskamlts lglklgdrvv iagqkvgtlr
      301 fcgttefasg qwagieldep egknngsvgk vqyfkcapry gifaplskis kakdrrknia
      361 htpstkagpl irsqkidvah vtskvntglm tskkdsases tlslppgeel ktgaekdvpl
      421 igsisssssi sslehkqsls knlnargnnk ktmnkspsls srasaglnss aasvansgrc
      481 egdlrigdrv lvagqrigti kffgttnfap gywygielek phgkndgsvg gvqyfscspr
      541 ygifappsrv qrvtdsldtl seissnkqnh sypgfrrsfs ttsassqkei nrrnafaksk
      601 ptlhrswsss mtagglegsv klhegsqvll tssnematvr yvgptdfasg iwlglelrsp
      661 kgkndgavgd kryftckpnh gvlvrpsrvt yrgingsklv denc
//
LOCUS       XP_061011073             121 aa            linear   MAM 02-DEC-2023
DEFINITION  protein yippee-like 5 [Dama dama].
ACCESSION   XP_061011073
VERSION     XP_061011073.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155090.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..121
                     /product="protein yippee-like 5"
                     /calculated_mol_wt=13711
     Region          14..107
                     /region_name="RLR_C_like"
                     /note="C-terminal domain of Retinoic acid-inducible gene
                     (RIG)-I-like Receptors, Cereblon (CRBN), and similar
                     protein domains; cl13152"
                     /db_xref="CDD:472430"
     CDS             1..121
                     /gene="YPEL5"
                     /coded_by="XM_061155090.1:177..542"
                     /db_xref="GeneID:133064687"
ORIGIN      
        1 mgrifldhig gtrlfscanc dtiltnrsel istrftgatg raflfnkvvn lqysevqdrv
       61 mltgrhmvrd vsckncnskl gwiyefated sqrykegrvi leralvrese gfeehvpsdn
      121 s
//
LOCUS       XP_061011074             121 aa            linear   MAM 02-DEC-2023
DEFINITION  protein yippee-like 5 [Dama dama].
ACCESSION   XP_061011074
VERSION     XP_061011074.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155091.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..121
                     /product="protein yippee-like 5"
                     /calculated_mol_wt=13711
     Region          14..107
                     /region_name="RLR_C_like"
                     /note="C-terminal domain of Retinoic acid-inducible gene
                     (RIG)-I-like Receptors, Cereblon (CRBN), and similar
                     protein domains; cl13152"
                     /db_xref="CDD:472430"
     CDS             1..121
                     /gene="YPEL5"
                     /coded_by="XM_061155091.1:119..484"
                     /db_xref="GeneID:133064687"
ORIGIN      
        1 mgrifldhig gtrlfscanc dtiltnrsel istrftgatg raflfnkvvn lqysevqdrv
       61 mltgrhmvrd vsckncnskl gwiyefated sqrykegrvi leralvrese gfeehvpsdn
      121 s
//
LOCUS       XP_061011075             121 aa            linear   MAM 02-DEC-2023
DEFINITION  protein yippee-like 5 [Dama dama].
ACCESSION   XP_061011075
VERSION     XP_061011075.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155092.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..121
                     /product="protein yippee-like 5"
                     /calculated_mol_wt=13711
     Region          14..107
                     /region_name="RLR_C_like"
                     /note="C-terminal domain of Retinoic acid-inducible gene
                     (RIG)-I-like Receptors, Cereblon (CRBN), and similar
                     protein domains; cl13152"
                     /db_xref="CDD:472430"
     CDS             1..121
                     /gene="YPEL5"
                     /coded_by="XM_061155092.1:112..477"
                     /db_xref="GeneID:133064687"
ORIGIN      
        1 mgrifldhig gtrlfscanc dtiltnrsel istrftgatg raflfnkvvn lqysevqdrv
       61 mltgrhmvrd vsckncnskl gwiyefated sqrykegrvi leralvrese gfeehvpsdn
      121 s
//
LOCUS       XP_061011076             105 aa            linear   MAM 02-DEC-2023
DEFINITION  protein LBH [Dama dama].
ACCESSION   XP_061011076
VERSION     XP_061011076.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155093.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..105
                     /product="protein LBH"
                     /calculated_mol_wt=11890
     Region          18..104
                     /region_name="Lbh"
                     /note="Cardiac transcription factor regulator,
                     Developmental protein; pfam15317"
                     /db_xref="CDD:434627"
     CDS             1..105
                     /gene="LBH"
                     /coded_by="XM_061155093.1:186..503"
                     /db_xref="GeneID:133064689"
ORIGIN      
        1 msvyfpihcp dylssaemte vmmntpsmee iglnprkdgl syqifpdpsd fdrccklkdr
       61 lpsivvepte gevesgelrw ppeeflvqed aqdnceetas enkeq
//
LOCUS       XP_061011077             668 aa            linear   MAM 02-DEC-2023
DEFINITION  calpain-13 [Dama dama].
ACCESSION   XP_061011077
VERSION     XP_061011077.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155094.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..668
                     /product="calpain-13"
                     /calculated_mol_wt=76886
     Region          35..330
                     /region_name="Peptidase_C2"
                     /note="Calpain family cysteine protease; pfam00648"
                     /db_xref="CDD:459889"
     Region          368..472
                     /region_name="Calpain_III"
                     /note="Calpain, subdomain III. Calpains are
                     calcium-activated cytoplasmic cysteine proteinases,
                     participate in cytoskeletal remodeling processes, cell
                     differentiation, apoptosis and signal transduction.
                     Catalytic domain and the two calmodulin-like domains
                     are...; cl00165"
                     /db_xref="CDD:469636"
     Region          500..668
                     /region_name="EFh_PEF_CAPN13_14"
                     /note="Penta-EF hand, calcium binding motifs, found in
                     calpain-13 (CAPN13), calpain-14 (CAPN14), and similar
                     proteins; cd16195"
                     /db_xref="CDD:320070"
     Region          500..528
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          541..570
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Site            order(550,554,561)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320070"
     Region          571..604
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          610..638
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          640..668
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     CDS             1..668
                     /gene="CAPN13"
                     /coded_by="XM_061155094.1:399..2405"
                     /db_xref="GeneID:133064690"
ORIGIN      
        1 mahnqqfpak tpiikfkeqd fyslrdhcln rgllfedetf paetysiglq llkgkdlsnl
       61 swmrpkdllk gkpeplfile gasrfdiqqg eagdcwflaa lgaltqspqy lqkilidqsf
      121 syqyagifcf rfwrcgqwve vviddrlpvl nneyifvkpr nkrefwpcll ekayakfhgs
      181 yanlhygylp dalvdltggv vtnislhlss sdlmtmvkta aeagslmtcg tltgpasesm
      241 rmanglvsrh aytvtgaeqi eyrrrweyli rlwnpwgkie wsgrwsdrsl ewqethdlrk
      301 nqlyedkdng efwmscqdfr dnffglficn qvpisldhgs tlherwsqmm fkdhlipgnt
      361 egyqrdmqyi fsvpdsvenn nvimsfnigp qnlkekdrtf plkykvfkvd yqfqhfqerl
      421 pstffskfri aekgivsett rnltecfsls pgtyvvvvse greaiefllr iflkmpdsdr
      481 hldgslnlra lqaslpgngs qksifykyaq qgldidatql qsllnrefls gppgdafsld
      541 ecrsivalmd lkvngrldqe efsrlwsrlv hcqsvfqnsp knadvflssd lwkaikdtdf
      601 lagisitsel ldlmklrysd stgrvsfpsl vcllmrleam akafqnlskd gkglylteme
      661 wmnlvmyn
//
LOCUS       XP_061011078             668 aa            linear   MAM 02-DEC-2023
DEFINITION  calpain-13 [Dama dama].
ACCESSION   XP_061011078
VERSION     XP_061011078.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155095.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..668
                     /product="calpain-13"
                     /calculated_mol_wt=76886
     Region          35..330
                     /region_name="Peptidase_C2"
                     /note="Calpain family cysteine protease; pfam00648"
                     /db_xref="CDD:459889"
     Region          368..472
                     /region_name="Calpain_III"
                     /note="Calpain, subdomain III. Calpains are
                     calcium-activated cytoplasmic cysteine proteinases,
                     participate in cytoskeletal remodeling processes, cell
                     differentiation, apoptosis and signal transduction.
                     Catalytic domain and the two calmodulin-like domains
                     are...; cl00165"
                     /db_xref="CDD:469636"
     Region          500..668
                     /region_name="EFh_PEF_CAPN13_14"
                     /note="Penta-EF hand, calcium binding motifs, found in
                     calpain-13 (CAPN13), calpain-14 (CAPN14), and similar
                     proteins; cd16195"
                     /db_xref="CDD:320070"
     Region          500..528
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          541..570
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Site            order(550,554,561)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320070"
     Region          571..604
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          610..638
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          640..668
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     CDS             1..668
                     /gene="CAPN13"
                     /coded_by="XM_061155095.1:226..2232"
                     /db_xref="GeneID:133064690"
ORIGIN      
        1 mahnqqfpak tpiikfkeqd fyslrdhcln rgllfedetf paetysiglq llkgkdlsnl
       61 swmrpkdllk gkpeplfile gasrfdiqqg eagdcwflaa lgaltqspqy lqkilidqsf
      121 syqyagifcf rfwrcgqwve vviddrlpvl nneyifvkpr nkrefwpcll ekayakfhgs
      181 yanlhygylp dalvdltggv vtnislhlss sdlmtmvkta aeagslmtcg tltgpasesm
      241 rmanglvsrh aytvtgaeqi eyrrrweyli rlwnpwgkie wsgrwsdrsl ewqethdlrk
      301 nqlyedkdng efwmscqdfr dnffglficn qvpisldhgs tlherwsqmm fkdhlipgnt
      361 egyqrdmqyi fsvpdsvenn nvimsfnigp qnlkekdrtf plkykvfkvd yqfqhfqerl
      421 pstffskfri aekgivsett rnltecfsls pgtyvvvvse greaiefllr iflkmpdsdr
      481 hldgslnlra lqaslpgngs qksifykyaq qgldidatql qsllnrefls gppgdafsld
      541 ecrsivalmd lkvngrldqe efsrlwsrlv hcqsvfqnsp knadvflssd lwkaikdtdf
      601 lagisitsel ldlmklrysd stgrvsfpsl vcllmrleam akafqnlskd gkglylteme
      661 wmnlvmyn
//
LOCUS       XP_061011080             668 aa            linear   MAM 02-DEC-2023
DEFINITION  calpain-13 [Dama dama].
ACCESSION   XP_061011080
VERSION     XP_061011080.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155097.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..668
                     /product="calpain-13"
                     /calculated_mol_wt=76886
     Region          35..330
                     /region_name="Peptidase_C2"
                     /note="Calpain family cysteine protease; pfam00648"
                     /db_xref="CDD:459889"
     Region          368..472
                     /region_name="Calpain_III"
                     /note="Calpain, subdomain III. Calpains are
                     calcium-activated cytoplasmic cysteine proteinases,
                     participate in cytoskeletal remodeling processes, cell
                     differentiation, apoptosis and signal transduction.
                     Catalytic domain and the two calmodulin-like domains
                     are...; cl00165"
                     /db_xref="CDD:469636"
     Region          500..668
                     /region_name="EFh_PEF_CAPN13_14"
                     /note="Penta-EF hand, calcium binding motifs, found in
                     calpain-13 (CAPN13), calpain-14 (CAPN14), and similar
                     proteins; cd16195"
                     /db_xref="CDD:320070"
     Region          500..528
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          541..570
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Site            order(550,554,561)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320070"
     Region          571..604
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          610..638
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          640..668
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     CDS             1..668
                     /gene="CAPN13"
                     /coded_by="XM_061155097.1:338..2344"
                     /db_xref="GeneID:133064690"
ORIGIN      
        1 mahnqqfpak tpiikfkeqd fyslrdhcln rgllfedetf paetysiglq llkgkdlsnl
       61 swmrpkdllk gkpeplfile gasrfdiqqg eagdcwflaa lgaltqspqy lqkilidqsf
      121 syqyagifcf rfwrcgqwve vviddrlpvl nneyifvkpr nkrefwpcll ekayakfhgs
      181 yanlhygylp dalvdltggv vtnislhlss sdlmtmvkta aeagslmtcg tltgpasesm
      241 rmanglvsrh aytvtgaeqi eyrrrweyli rlwnpwgkie wsgrwsdrsl ewqethdlrk
      301 nqlyedkdng efwmscqdfr dnffglficn qvpisldhgs tlherwsqmm fkdhlipgnt
      361 egyqrdmqyi fsvpdsvenn nvimsfnigp qnlkekdrtf plkykvfkvd yqfqhfqerl
      421 pstffskfri aekgivsett rnltecfsls pgtyvvvvse greaiefllr iflkmpdsdr
      481 hldgslnlra lqaslpgngs qksifykyaq qgldidatql qsllnrefls gppgdafsld
      541 ecrsivalmd lkvngrldqe efsrlwsrlv hcqsvfqnsp knadvflssd lwkaikdtdf
      601 lagisitsel ldlmklrysd stgrvsfpsl vcllmrleam akafqnlskd gkglylteme
      661 wmnlvmyn
//
LOCUS       XP_061011081             668 aa            linear   MAM 02-DEC-2023
DEFINITION  calpain-13 [Dama dama].
ACCESSION   XP_061011081
VERSION     XP_061011081.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155098.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..668
                     /product="calpain-13"
                     /calculated_mol_wt=76886
     Region          35..330
                     /region_name="Peptidase_C2"
                     /note="Calpain family cysteine protease; pfam00648"
                     /db_xref="CDD:459889"
     Region          368..472
                     /region_name="Calpain_III"
                     /note="Calpain, subdomain III. Calpains are
                     calcium-activated cytoplasmic cysteine proteinases,
                     participate in cytoskeletal remodeling processes, cell
                     differentiation, apoptosis and signal transduction.
                     Catalytic domain and the two calmodulin-like domains
                     are...; cl00165"
                     /db_xref="CDD:469636"
     Region          500..668
                     /region_name="EFh_PEF_CAPN13_14"
                     /note="Penta-EF hand, calcium binding motifs, found in
                     calpain-13 (CAPN13), calpain-14 (CAPN14), and similar
                     proteins; cd16195"
                     /db_xref="CDD:320070"
     Region          500..528
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          541..570
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Site            order(550,554,561)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320070"
     Region          571..604
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          610..638
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          640..668
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     CDS             1..668
                     /gene="CAPN13"
                     /coded_by="XM_061155098.1:399..2405"
                     /db_xref="GeneID:133064690"
ORIGIN      
        1 mahnqqfpak tpiikfkeqd fyslrdhcln rgllfedetf paetysiglq llkgkdlsnl
       61 swmrpkdllk gkpeplfile gasrfdiqqg eagdcwflaa lgaltqspqy lqkilidqsf
      121 syqyagifcf rfwrcgqwve vviddrlpvl nneyifvkpr nkrefwpcll ekayakfhgs
      181 yanlhygylp dalvdltggv vtnislhlss sdlmtmvkta aeagslmtcg tltgpasesm
      241 rmanglvsrh aytvtgaeqi eyrrrweyli rlwnpwgkie wsgrwsdrsl ewqethdlrk
      301 nqlyedkdng efwmscqdfr dnffglficn qvpisldhgs tlherwsqmm fkdhlipgnt
      361 egyqrdmqyi fsvpdsvenn nvimsfnigp qnlkekdrtf plkykvfkvd yqfqhfqerl
      421 pstffskfri aekgivsett rnltecfsls pgtyvvvvse greaiefllr iflkmpdsdr
      481 hldgslnlra lqaslpgngs qksifykyaq qgldidatql qsllnrefls gppgdafsld
      541 ecrsivalmd lkvngrldqe efsrlwsrlv hcqsvfqnsp knadvflssd lwkaikdtdf
      601 lagisitsel ldlmklrysd stgrvsfpsl vcllmrleam akafqnlskd gkglylteme
      661 wmnlvmyn
//
LOCUS       XP_061011082             668 aa            linear   MAM 02-DEC-2023
DEFINITION  calpain-13 [Dama dama].
ACCESSION   XP_061011082
VERSION     XP_061011082.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155099.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..668
                     /product="calpain-13"
                     /calculated_mol_wt=76886
     Region          35..330
                     /region_name="Peptidase_C2"
                     /note="Calpain family cysteine protease; pfam00648"
                     /db_xref="CDD:459889"
     Region          368..472
                     /region_name="Calpain_III"
                     /note="Calpain, subdomain III. Calpains are
                     calcium-activated cytoplasmic cysteine proteinases,
                     participate in cytoskeletal remodeling processes, cell
                     differentiation, apoptosis and signal transduction.
                     Catalytic domain and the two calmodulin-like domains
                     are...; cl00165"
                     /db_xref="CDD:469636"
     Region          500..668
                     /region_name="EFh_PEF_CAPN13_14"
                     /note="Penta-EF hand, calcium binding motifs, found in
                     calpain-13 (CAPN13), calpain-14 (CAPN14), and similar
                     proteins; cd16195"
                     /db_xref="CDD:320070"
     Region          500..528
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          541..570
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Site            order(550,554,561)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320070"
     Region          571..604
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          610..638
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          640..668
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     CDS             1..668
                     /gene="CAPN13"
                     /coded_by="XM_061155099.1:492..2498"
                     /db_xref="GeneID:133064690"
ORIGIN      
        1 mahnqqfpak tpiikfkeqd fyslrdhcln rgllfedetf paetysiglq llkgkdlsnl
       61 swmrpkdllk gkpeplfile gasrfdiqqg eagdcwflaa lgaltqspqy lqkilidqsf
      121 syqyagifcf rfwrcgqwve vviddrlpvl nneyifvkpr nkrefwpcll ekayakfhgs
      181 yanlhygylp dalvdltggv vtnislhlss sdlmtmvkta aeagslmtcg tltgpasesm
      241 rmanglvsrh aytvtgaeqi eyrrrweyli rlwnpwgkie wsgrwsdrsl ewqethdlrk
      301 nqlyedkdng efwmscqdfr dnffglficn qvpisldhgs tlherwsqmm fkdhlipgnt
      361 egyqrdmqyi fsvpdsvenn nvimsfnigp qnlkekdrtf plkykvfkvd yqfqhfqerl
      421 pstffskfri aekgivsett rnltecfsls pgtyvvvvse greaiefllr iflkmpdsdr
      481 hldgslnlra lqaslpgngs qksifykyaq qgldidatql qsllnrefls gppgdafsld
      541 ecrsivalmd lkvngrldqe efsrlwsrlv hcqsvfqnsp knadvflssd lwkaikdtdf
      601 lagisitsel ldlmklrysd stgrvsfpsl vcllmrleam akafqnlskd gkglylteme
      661 wmnlvmyn
//
LOCUS       XP_061011083             668 aa            linear   MAM 02-DEC-2023
DEFINITION  calpain-13 [Dama dama].
ACCESSION   XP_061011083
VERSION     XP_061011083.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155100.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..668
                     /product="calpain-13"
                     /calculated_mol_wt=76886
     Region          35..330
                     /region_name="Peptidase_C2"
                     /note="Calpain family cysteine protease; pfam00648"
                     /db_xref="CDD:459889"
     Region          368..472
                     /region_name="Calpain_III"
                     /note="Calpain, subdomain III. Calpains are
                     calcium-activated cytoplasmic cysteine proteinases,
                     participate in cytoskeletal remodeling processes, cell
                     differentiation, apoptosis and signal transduction.
                     Catalytic domain and the two calmodulin-like domains
                     are...; cl00165"
                     /db_xref="CDD:469636"
     Region          500..668
                     /region_name="EFh_PEF_CAPN13_14"
                     /note="Penta-EF hand, calcium binding motifs, found in
                     calpain-13 (CAPN13), calpain-14 (CAPN14), and similar
                     proteins; cd16195"
                     /db_xref="CDD:320070"
     Region          500..528
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          541..570
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Site            order(550,554,561)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320070"
     Region          571..604
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          610..638
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          640..668
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     CDS             1..668
                     /gene="CAPN13"
                     /coded_by="XM_061155100.1:431..2437"
                     /db_xref="GeneID:133064690"
ORIGIN      
        1 mahnqqfpak tpiikfkeqd fyslrdhcln rgllfedetf paetysiglq llkgkdlsnl
       61 swmrpkdllk gkpeplfile gasrfdiqqg eagdcwflaa lgaltqspqy lqkilidqsf
      121 syqyagifcf rfwrcgqwve vviddrlpvl nneyifvkpr nkrefwpcll ekayakfhgs
      181 yanlhygylp dalvdltggv vtnislhlss sdlmtmvkta aeagslmtcg tltgpasesm
      241 rmanglvsrh aytvtgaeqi eyrrrweyli rlwnpwgkie wsgrwsdrsl ewqethdlrk
      301 nqlyedkdng efwmscqdfr dnffglficn qvpisldhgs tlherwsqmm fkdhlipgnt
      361 egyqrdmqyi fsvpdsvenn nvimsfnigp qnlkekdrtf plkykvfkvd yqfqhfqerl
      421 pstffskfri aekgivsett rnltecfsls pgtyvvvvse greaiefllr iflkmpdsdr
      481 hldgslnlra lqaslpgngs qksifykyaq qgldidatql qsllnrefls gppgdafsld
      541 ecrsivalmd lkvngrldqe efsrlwsrlv hcqsvfqnsp knadvflssd lwkaikdtdf
      601 lagisitsel ldlmklrysd stgrvsfpsl vcllmrleam akafqnlskd gkglylteme
      661 wmnlvmyn
//
LOCUS       XP_061011084             668 aa            linear   MAM 02-DEC-2023
DEFINITION  calpain-13 [Dama dama].
ACCESSION   XP_061011084
VERSION     XP_061011084.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155101.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..668
                     /product="calpain-13"
                     /calculated_mol_wt=76886
     Region          35..330
                     /region_name="Peptidase_C2"
                     /note="Calpain family cysteine protease; pfam00648"
                     /db_xref="CDD:459889"
     Region          368..472
                     /region_name="Calpain_III"
                     /note="Calpain, subdomain III. Calpains are
                     calcium-activated cytoplasmic cysteine proteinases,
                     participate in cytoskeletal remodeling processes, cell
                     differentiation, apoptosis and signal transduction.
                     Catalytic domain and the two calmodulin-like domains
                     are...; cl00165"
                     /db_xref="CDD:469636"
     Region          500..668
                     /region_name="EFh_PEF_CAPN13_14"
                     /note="Penta-EF hand, calcium binding motifs, found in
                     calpain-13 (CAPN13), calpain-14 (CAPN14), and similar
                     proteins; cd16195"
                     /db_xref="CDD:320070"
     Region          500..528
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          541..570
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Site            order(550,554,561)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320070"
     Region          571..604
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          610..638
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          640..668
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     CDS             1..668
                     /gene="CAPN13"
                     /coded_by="XM_061155101.1:386..2392"
                     /db_xref="GeneID:133064690"
ORIGIN      
        1 mahnqqfpak tpiikfkeqd fyslrdhcln rgllfedetf paetysiglq llkgkdlsnl
       61 swmrpkdllk gkpeplfile gasrfdiqqg eagdcwflaa lgaltqspqy lqkilidqsf
      121 syqyagifcf rfwrcgqwve vviddrlpvl nneyifvkpr nkrefwpcll ekayakfhgs
      181 yanlhygylp dalvdltggv vtnislhlss sdlmtmvkta aeagslmtcg tltgpasesm
      241 rmanglvsrh aytvtgaeqi eyrrrweyli rlwnpwgkie wsgrwsdrsl ewqethdlrk
      301 nqlyedkdng efwmscqdfr dnffglficn qvpisldhgs tlherwsqmm fkdhlipgnt
      361 egyqrdmqyi fsvpdsvenn nvimsfnigp qnlkekdrtf plkykvfkvd yqfqhfqerl
      421 pstffskfri aekgivsett rnltecfsls pgtyvvvvse greaiefllr iflkmpdsdr
      481 hldgslnlra lqaslpgngs qksifykyaq qgldidatql qsllnrefls gppgdafsld
      541 ecrsivalmd lkvngrldqe efsrlwsrlv hcqsvfqnsp knadvflssd lwkaikdtdf
      601 lagisitsel ldlmklrysd stgrvsfpsl vcllmrleam akafqnlskd gkglylteme
      661 wmnlvmyn
//
LOCUS       XP_061011085             668 aa            linear   MAM 02-DEC-2023
DEFINITION  calpain-13 [Dama dama].
ACCESSION   XP_061011085
VERSION     XP_061011085.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155102.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..668
                     /product="calpain-13"
                     /calculated_mol_wt=76886
     Region          35..330
                     /region_name="Peptidase_C2"
                     /note="Calpain family cysteine protease; pfam00648"
                     /db_xref="CDD:459889"
     Region          368..472
                     /region_name="Calpain_III"
                     /note="Calpain, subdomain III. Calpains are
                     calcium-activated cytoplasmic cysteine proteinases,
                     participate in cytoskeletal remodeling processes, cell
                     differentiation, apoptosis and signal transduction.
                     Catalytic domain and the two calmodulin-like domains
                     are...; cl00165"
                     /db_xref="CDD:469636"
     Region          500..668
                     /region_name="EFh_PEF_CAPN13_14"
                     /note="Penta-EF hand, calcium binding motifs, found in
                     calpain-13 (CAPN13), calpain-14 (CAPN14), and similar
                     proteins; cd16195"
                     /db_xref="CDD:320070"
     Region          500..528
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          541..570
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Site            order(550,554,561)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320070"
     Region          571..604
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          610..638
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          640..668
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     CDS             1..668
                     /gene="CAPN13"
                     /coded_by="XM_061155102.1:399..2405"
                     /db_xref="GeneID:133064690"
ORIGIN      
        1 mahnqqfpak tpiikfkeqd fyslrdhcln rgllfedetf paetysiglq llkgkdlsnl
       61 swmrpkdllk gkpeplfile gasrfdiqqg eagdcwflaa lgaltqspqy lqkilidqsf
      121 syqyagifcf rfwrcgqwve vviddrlpvl nneyifvkpr nkrefwpcll ekayakfhgs
      181 yanlhygylp dalvdltggv vtnislhlss sdlmtmvkta aeagslmtcg tltgpasesm
      241 rmanglvsrh aytvtgaeqi eyrrrweyli rlwnpwgkie wsgrwsdrsl ewqethdlrk
      301 nqlyedkdng efwmscqdfr dnffglficn qvpisldhgs tlherwsqmm fkdhlipgnt
      361 egyqrdmqyi fsvpdsvenn nvimsfnigp qnlkekdrtf plkykvfkvd yqfqhfqerl
      421 pstffskfri aekgivsett rnltecfsls pgtyvvvvse greaiefllr iflkmpdsdr
      481 hldgslnlra lqaslpgngs qksifykyaq qgldidatql qsllnrefls gppgdafsld
      541 ecrsivalmd lkvngrldqe efsrlwsrlv hcqsvfqnsp knadvflssd lwkaikdtdf
      601 lagisitsel ldlmklrysd stgrvsfpsl vcllmrleam akafqnlskd gkglylteme
      661 wmnlvmyn
//
LOCUS       XP_061011086             668 aa            linear   MAM 02-DEC-2023
DEFINITION  calpain-13 [Dama dama].
ACCESSION   XP_061011086
VERSION     XP_061011086.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155103.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..668
                     /product="calpain-13"
                     /calculated_mol_wt=76886
     Region          35..330
                     /region_name="Peptidase_C2"
                     /note="Calpain family cysteine protease; pfam00648"
                     /db_xref="CDD:459889"
     Region          368..472
                     /region_name="Calpain_III"
                     /note="Calpain, subdomain III. Calpains are
                     calcium-activated cytoplasmic cysteine proteinases,
                     participate in cytoskeletal remodeling processes, cell
                     differentiation, apoptosis and signal transduction.
                     Catalytic domain and the two calmodulin-like domains
                     are...; cl00165"
                     /db_xref="CDD:469636"
     Region          500..668
                     /region_name="EFh_PEF_CAPN13_14"
                     /note="Penta-EF hand, calcium binding motifs, found in
                     calpain-13 (CAPN13), calpain-14 (CAPN14), and similar
                     proteins; cd16195"
                     /db_xref="CDD:320070"
     Region          500..528
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          541..570
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Site            order(550,554,561)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320070"
     Region          571..604
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          610..638
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          640..668
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     CDS             1..668
                     /gene="CAPN13"
                     /coded_by="XM_061155103.1:376..2382"
                     /db_xref="GeneID:133064690"
ORIGIN      
        1 mahnqqfpak tpiikfkeqd fyslrdhcln rgllfedetf paetysiglq llkgkdlsnl
       61 swmrpkdllk gkpeplfile gasrfdiqqg eagdcwflaa lgaltqspqy lqkilidqsf
      121 syqyagifcf rfwrcgqwve vviddrlpvl nneyifvkpr nkrefwpcll ekayakfhgs
      181 yanlhygylp dalvdltggv vtnislhlss sdlmtmvkta aeagslmtcg tltgpasesm
      241 rmanglvsrh aytvtgaeqi eyrrrweyli rlwnpwgkie wsgrwsdrsl ewqethdlrk
      301 nqlyedkdng efwmscqdfr dnffglficn qvpisldhgs tlherwsqmm fkdhlipgnt
      361 egyqrdmqyi fsvpdsvenn nvimsfnigp qnlkekdrtf plkykvfkvd yqfqhfqerl
      421 pstffskfri aekgivsett rnltecfsls pgtyvvvvse greaiefllr iflkmpdsdr
      481 hldgslnlra lqaslpgngs qksifykyaq qgldidatql qsllnrefls gppgdafsld
      541 ecrsivalmd lkvngrldqe efsrlwsrlv hcqsvfqnsp knadvflssd lwkaikdtdf
      601 lagisitsel ldlmklrysd stgrvsfpsl vcllmrleam akafqnlskd gkglylteme
      661 wmnlvmyn
//
LOCUS       XP_061011087             668 aa            linear   MAM 02-DEC-2023
DEFINITION  calpain-13 [Dama dama].
ACCESSION   XP_061011087
VERSION     XP_061011087.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155104.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..668
                     /product="calpain-13"
                     /calculated_mol_wt=76886
     Region          35..330
                     /region_name="Peptidase_C2"
                     /note="Calpain family cysteine protease; pfam00648"
                     /db_xref="CDD:459889"
     Region          368..472
                     /region_name="Calpain_III"
                     /note="Calpain, subdomain III. Calpains are
                     calcium-activated cytoplasmic cysteine proteinases,
                     participate in cytoskeletal remodeling processes, cell
                     differentiation, apoptosis and signal transduction.
                     Catalytic domain and the two calmodulin-like domains
                     are...; cl00165"
                     /db_xref="CDD:469636"
     Region          500..668
                     /region_name="EFh_PEF_CAPN13_14"
                     /note="Penta-EF hand, calcium binding motifs, found in
                     calpain-13 (CAPN13), calpain-14 (CAPN14), and similar
                     proteins; cd16195"
                     /db_xref="CDD:320070"
     Region          500..528
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          541..570
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Site            order(550,554,561)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320070"
     Region          571..604
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          610..638
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          640..668
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     CDS             1..668
                     /gene="CAPN13"
                     /coded_by="XM_061155104.1:364..2370"
                     /db_xref="GeneID:133064690"
ORIGIN      
        1 mahnqqfpak tpiikfkeqd fyslrdhcln rgllfedetf paetysiglq llkgkdlsnl
       61 swmrpkdllk gkpeplfile gasrfdiqqg eagdcwflaa lgaltqspqy lqkilidqsf
      121 syqyagifcf rfwrcgqwve vviddrlpvl nneyifvkpr nkrefwpcll ekayakfhgs
      181 yanlhygylp dalvdltggv vtnislhlss sdlmtmvkta aeagslmtcg tltgpasesm
      241 rmanglvsrh aytvtgaeqi eyrrrweyli rlwnpwgkie wsgrwsdrsl ewqethdlrk
      301 nqlyedkdng efwmscqdfr dnffglficn qvpisldhgs tlherwsqmm fkdhlipgnt
      361 egyqrdmqyi fsvpdsvenn nvimsfnigp qnlkekdrtf plkykvfkvd yqfqhfqerl
      421 pstffskfri aekgivsett rnltecfsls pgtyvvvvse greaiefllr iflkmpdsdr
      481 hldgslnlra lqaslpgngs qksifykyaq qgldidatql qsllnrefls gppgdafsld
      541 ecrsivalmd lkvngrldqe efsrlwsrlv hcqsvfqnsp knadvflssd lwkaikdtdf
      601 lagisitsel ldlmklrysd stgrvsfpsl vcllmrleam akafqnlskd gkglylteme
      661 wmnlvmyn
//
LOCUS       XP_061011088             383 aa            linear   MAM 02-DEC-2023
DEFINITION  lysocardiolipin acyltransferase 1 isoform X1 [Dama dama].
ACCESSION   XP_061011088
VERSION     XP_061011088.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155105.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..383
                     /product="lysocardiolipin acyltransferase 1 isoform X1"
                     /calculated_mol_wt=45423
     Region          62..255
                     /region_name="LPLAT_LCLAT1-like"
                     /note="Lysophospholipid Acyltransferases (LPLATs) of
                     Glycerophospholipid Biosynthesis: LCLAT1-like; cd07990"
                     /db_xref="CDD:153252"
     Site            order(92,95,97,118..121,173..175)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153252"
     Region          240..314
                     /region_name="Acyltransf_C"
                     /note="Acyltransferase C-terminus; pfam16076"
                     /db_xref="CDD:465006"
     CDS             1..383
                     /gene="LCLAT1"
                     /coded_by="XM_061155105.1:80..1231"
                     /db_xref="GeneID:133064691"
ORIGIN      
        1 mkfknrimvs wrgiyfiltl fwgsffgsif mlgpflplmf ispswyrwin nrivatwltl
       61 pvalletmlg vkviitgdaf vpgersviim nhrtrmdwmf lwnclmrysy lrlekiclka
      121 slksvpgfgw amqaaayifi hrkwkddksh fedmidyfcd ireplqlllf pegtdltens
      181 ttrsnefaek nglqkykyvl hprttgftfv vdrlregknl davhditvay phnipqtekh
      241 lllgdfpkei hfhvhrypvn tlpeskedlq lwchkrweek eerlrsfyqg eknfsftgqt
      301 vvppckselr vlvvkflsil ywtlfsptmc lfiylyslvr wyfiiiivif vlqerifggl
      361 eilelacyrl lhkqphlnak kne
//
LOCUS       XP_061011089             376 aa            linear   MAM 02-DEC-2023
DEFINITION  lysocardiolipin acyltransferase 1 isoform X2 [Dama dama].
ACCESSION   XP_061011089
VERSION     XP_061011089.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155106.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..376
                     /product="lysocardiolipin acyltransferase 1 isoform X2"
                     /calculated_mol_wt=44504
     Region          55..248
                     /region_name="LPLAT_LCLAT1-like"
                     /note="Lysophospholipid Acyltransferases (LPLATs) of
                     Glycerophospholipid Biosynthesis: LCLAT1-like; cd07990"
                     /db_xref="CDD:153252"
     Site            order(85,88,90,111..114,166..168)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153252"
     Region          233..307
                     /region_name="Acyltransf_C"
                     /note="Acyltransferase C-terminus; pfam16076"
                     /db_xref="CDD:465006"
     CDS             1..376
                     /gene="LCLAT1"
                     /coded_by="XM_061155106.1:162..1292"
                     /db_xref="GeneID:133064691"
ORIGIN      
        1 mvswrgiyfi ltlfwgsffg sifmlgpflp lmfispswyr winnrivatw ltlpvallet
       61 mlgvkviitg dafvpgersv iimnhrtrmd wmflwnclmr ysylrlekic lkaslksvpg
      121 fgwamqaaay ifihrkwkdd kshfedmidy fcdireplql llfpegtdlt ensttrsnef
      181 aeknglqkyk yvlhprttgf tfvvdrlreg knldavhdit vayphnipqt ekhlllgdfp
      241 keihfhvhry pvntlpeske dlqlwchkrw eekeerlrsf yqgeknfsft gqtvvppcks
      301 elrvlvvkfl silywtlfsp tmclfiylys lvrwyfiiii vifvlqerif ggleilelac
      361 yrllhkqphl nakkne
//
LOCUS       XP_061011090             376 aa            linear   MAM 02-DEC-2023
DEFINITION  lysocardiolipin acyltransferase 1 isoform X2 [Dama dama].
ACCESSION   XP_061011090
VERSION     XP_061011090.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155107.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..376
                     /product="lysocardiolipin acyltransferase 1 isoform X2"
                     /calculated_mol_wt=44504
     Region          55..248
                     /region_name="LPLAT_LCLAT1-like"
                     /note="Lysophospholipid Acyltransferases (LPLATs) of
                     Glycerophospholipid Biosynthesis: LCLAT1-like; cd07990"
                     /db_xref="CDD:153252"
     Site            order(85,88,90,111..114,166..168)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153252"
     Region          233..307
                     /region_name="Acyltransf_C"
                     /note="Acyltransferase C-terminus; pfam16076"
                     /db_xref="CDD:465006"
     CDS             1..376
                     /gene="LCLAT1"
                     /coded_by="XM_061155107.1:247..1377"
                     /db_xref="GeneID:133064691"
ORIGIN      
        1 mvswrgiyfi ltlfwgsffg sifmlgpflp lmfispswyr winnrivatw ltlpvallet
       61 mlgvkviitg dafvpgersv iimnhrtrmd wmflwnclmr ysylrlekic lkaslksvpg
      121 fgwamqaaay ifihrkwkdd kshfedmidy fcdireplql llfpegtdlt ensttrsnef
      181 aeknglqkyk yvlhprttgf tfvvdrlreg knldavhdit vayphnipqt ekhlllgdfp
      241 keihfhvhry pvntlpeske dlqlwchkrw eekeerlrsf yqgeknfsft gqtvvppcks
      301 elrvlvvkfl silywtlfsp tmclfiylys lvrwyfiiii vifvlqerif ggleilelac
      361 yrllhkqphl nakkne
//
LOCUS       XP_061011091             316 aa            linear   MAM 02-DEC-2023
DEFINITION  lysocardiolipin acyltransferase 1 isoform X3 [Dama dama].
ACCESSION   XP_061011091
VERSION     XP_061011091.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155108.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..316
                     /product="lysocardiolipin acyltransferase 1 isoform X3"
                     /calculated_mol_wt=37404
     Region          3..188
                     /region_name="LPLAT_LCLAT1-like"
                     /note="Lysophospholipid Acyltransferases (LPLATs) of
                     Glycerophospholipid Biosynthesis: LCLAT1-like; cd07990"
                     /db_xref="CDD:153252"
     Site            order(25,28,30,51..54,106..108)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153252"
     Region          173..247
                     /region_name="Acyltransf_C"
                     /note="Acyltransferase C-terminus; pfam16076"
                     /db_xref="CDD:465006"
     CDS             1..316
                     /gene="LCLAT1"
                     /coded_by="XM_061155108.1:173..1123"
                     /db_xref="GeneID:133064691"
ORIGIN      
        1 mlgvkviitg dafvpgersv iimnhrtrmd wmflwnclmr ysylrlekic lkaslksvpg
       61 fgwamqaaay ifihrkwkdd kshfedmidy fcdireplql llfpegtdlt ensttrsnef
      121 aeknglqkyk yvlhprttgf tfvvdrlreg knldavhdit vayphnipqt ekhlllgdfp
      181 keihfhvhry pvntlpeske dlqlwchkrw eekeerlrsf yqgeknfsft gqtvvppcks
      241 elrvlvvkfl silywtlfsp tmclfiylys lvrwyfiiii vifvlqerif ggleilelac
      301 yrllhkqphl nakkne
//
LOCUS       XP_061011092             535 aa            linear   MAM 02-DEC-2023
DEFINITION  EH domain-containing protein 3 [Dama dama].
ACCESSION   XP_061011092
VERSION     XP_061011092.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155109.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..535
                     /product="EH domain-containing protein 3"
                     /calculated_mol_wt=60783
     Region          24..56
                     /region_name="EHD_N"
                     /note="N-terminal EH-domain containing protein; pfam16880"
                     /db_xref="CDD:465295"
     Region          60..300
                     /region_name="EHD"
                     /note="Eps15 homology domain (EHD), C-terminal domain;
                     cd09913"
                     /db_xref="CDD:206740"
     Site            65..72
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206740"
     Site            order(70..73,153,220,222,256..258)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206740"
     Site            94
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206740"
     Site            98..100
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206740"
     Site            153..156
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206740"
     Site            order(155..156,183..184)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206740"
     Site            219..222
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206740"
     Site            256..258
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206740"
     Region          288..394
                     /region_name="DUF5600"
                     /note="Domain of unknown function (DUF5600); pfam18150"
                     /db_xref="CDD:465667"
     Region          438..531
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     CDS             1..535
                     /gene="EHD3"
                     /coded_by="XM_061155109.1:541..2148"
                     /db_xref="GeneID:133064694"
ORIGIN      
        1 mfswlrsddr rrkdpevfqt vsdglkklyr tkllpleehy rfhefhspal edadfdnkpm
       61 vllvgqystg kttfirylle qdfpgmrigp epttdsfisv mrgevegiip gnalvvdpkk
      121 pfrklnafgn aflnrfvcaq lpnpvlesis vidtpgilsg ekqrisrgyd faavlewfae
      181 rvdriillfd ahkldisdef sevikalknh edkmrvvlnk adqietqqlm rvygalmwsl
      241 gkivntpevi rvyigsfwsh pllipdnrkl feaeeqdlfr diqslprnaa lrklndlikr
      301 arlakvhayi isslkkemps mfgkdnkkke lvnnlaeiyg qierehqisp gdfpnlkrmq
      361 dqlqaqdfsk fqplksklle vvddmlahdi aqlmvlvrqe esqqpaqivk ggafegtlhg
      421 pfghgygega gegiddaewv vardkpmyde ifytlspvdg kitganakke mvrsklpnsv
      481 lgkiwkladi dkdgmlddee falanhlikv kleghelpne lpahlvppsk rkaae
//
LOCUS       XP_061011094             508 aa            linear   MAM 02-DEC-2023
DEFINITION  prenylcysteine oxidase 1 [Dama dama].
ACCESSION   XP_061011094
VERSION     XP_061011094.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155111.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..508
                     /product="prenylcysteine oxidase 1"
                     /calculated_mol_wt=56947
     Region          39..>111
                     /region_name="HemY"
                     /note="Protoporphyrinogen oxidase HemY/PPOX [Coenzyme
                     transport and metabolism]; COG1232"
                     /db_xref="CDD:440845"
     Region          131..497
                     /region_name="Prenylcys_lyase"
                     /note="Prenylcysteine lyase; pfam07156"
                     /db_xref="CDD:462104"
     CDS             1..508
                     /gene="PCYOX1"
                     /coded_by="XM_061155111.1:64..1590"
                     /db_xref="GeneID:133064695"
ORIGIN      
        1 mepvasglec stlrlwlgll llcswwypgs aeprappeki avigagiggt saayylrqkf
       61 gkdvkihvfe kgkvggrlat lnvqgqefes ggsvihplnl hmkrfvkdlg lsavqspsgl
      121 vgvyngetlv yeesswfiin mikliwhygf qslrmhmwve dildkfmriy ryqshdyafs
      181 svekllhslg gddylglfnr slletlqkas fsekfldeii tpvmrvnygq ttningfvga
      241 vsmagtdpgl wavkggnklv csrllqasrs nlvsglvmsi eektrtrqtg nsskvyevvy
      301 qtgsethsdf ydivlvatpl nrkmsninfl nfdppieefh qhyeplvttl ikgelnstvf
      361 ssralnefhl gtvlttdnpd lfinsiglvs pveedsnpqp kadiahvwki fsaaplskeq
      421 ilklfvsydy avkqswlayp hytppekcps iilhdrlyyl ngiefaasam emsaiagyna
      481 allayhrwng nthmidqedl yerlktel
//
LOCUS       XP_061011095              76 aa            linear   MAM 02-DEC-2023
DEFINITION  small nuclear ribonucleoprotein G [Dama dama].
ACCESSION   XP_061011095
VERSION     XP_061011095.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155112.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..76
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..76
                     /product="small nuclear ribonucleoprotein G"
                     /calculated_mol_wt=8365
     Region          5..74
                     /region_name="Sm_G"
                     /note="Sm protein G; cd01719"
                     /db_xref="CDD:212466"
     Site            order(8,12,20,25,38,59,61..62,64,67..71,73)
                     /site_type="other"
                     /note="heptamer interface [polypeptide binding]"
                     /db_xref="CDD:212466"
     Site            order(17..23,25..37,39..43)
                     /site_type="other"
                     /note="Sm1 motif"
                     /db_xref="CDD:212466"
     Site            order(37,39,63,65)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:212466"
     Site            59..70
                     /site_type="other"
                     /note="Sm2 motif"
                     /db_xref="CDD:212466"
     CDS             1..76
                     /gene="SNRPG"
                     /coded_by="XM_061155112.1:107..337"
                     /db_xref="GeneID:133064696"
ORIGIN      
        1 mskahppelk kfmdkklslk lnggrhvqgi lrgfdpfmnl videcvemat sgqqnnigmv
       61 virgnsiiml ealerv
//
LOCUS       XP_061011096             574 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C2orf42 homolog [Dama dama].
ACCESSION   XP_061011096
VERSION     XP_061011096.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155113.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..574
                     /product="uncharacterized protein C2orf42 homolog"
                     /calculated_mol_wt=63842
     Region          16..57
                     /region_name="zf-tcix"
                     /note="Putative treble-clef, zinc-finger, Zn-binding;
                     pfam14952"
                     /db_xref="CDD:464398"
     CDS             1..574
                     /gene="C11H2orf42"
                     /coded_by="XM_061155113.1:2948..4672"
                     /db_xref="GeneID:133064697"
ORIGIN      
        1 mepnslrtkv paflsdlgka tlrgirkcpr cgtyngtrgl scknktcgti frygarkqps
       61 veavkiitgs dlqvysvrqr drgpdyrcfv elgvsettiq tvdgtiitql ssgrcyvpsc
      121 lkaatqgvve nqcqhiklav ncqaeatplt lkssvlnamq aspetkqtiw qlateptgpl
      181 vqritknilv vkckasqkhs lgylhtsfvq kigakslper rffcscqtlk shksnaskde
      241 avprcihffa cicafasdet laqefsdfln fdssglkeii vpqlgchses pvsacestas
      301 kpkkrkkeev sgaqtnssll ppdavssnlr ksglkkpvva sslkrqacgq lldeaqvtls
      361 fqdwlasvte rihqtmhyqf dgkpeplvfh ipqsffdalq qrisigsakk rlpnsttafv
      421 rkdalplgtf skytwhitni lqvkqildtp empleitrsf iqnrdgtyel fkcpkveves
      481 iaetygriek qpvlrplelk tflkvgntsp dqkeptpfii ewipdilpqs kigelrikfe
      541 yghhrnghva eyqdqrppld qplelapltt itfp
//
LOCUS       XP_061011097             574 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C2orf42 homolog [Dama dama].
ACCESSION   XP_061011097
VERSION     XP_061011097.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155114.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..574
                     /product="uncharacterized protein C2orf42 homolog"
                     /calculated_mol_wt=63842
     Region          16..57
                     /region_name="zf-tcix"
                     /note="Putative treble-clef, zinc-finger, Zn-binding;
                     pfam14952"
                     /db_xref="CDD:464398"
     CDS             1..574
                     /gene="C11H2orf42"
                     /coded_by="XM_061155114.1:353..2077"
                     /db_xref="GeneID:133064697"
ORIGIN      
        1 mepnslrtkv paflsdlgka tlrgirkcpr cgtyngtrgl scknktcgti frygarkqps
       61 veavkiitgs dlqvysvrqr drgpdyrcfv elgvsettiq tvdgtiitql ssgrcyvpsc
      121 lkaatqgvve nqcqhiklav ncqaeatplt lkssvlnamq aspetkqtiw qlateptgpl
      181 vqritknilv vkckasqkhs lgylhtsfvq kigakslper rffcscqtlk shksnaskde
      241 avprcihffa cicafasdet laqefsdfln fdssglkeii vpqlgchses pvsacestas
      301 kpkkrkkeev sgaqtnssll ppdavssnlr ksglkkpvva sslkrqacgq lldeaqvtls
      361 fqdwlasvte rihqtmhyqf dgkpeplvfh ipqsffdalq qrisigsakk rlpnsttafv
      421 rkdalplgtf skytwhitni lqvkqildtp empleitrsf iqnrdgtyel fkcpkveves
      481 iaetygriek qpvlrplelk tflkvgntsp dqkeptpfii ewipdilpqs kigelrikfe
      541 yghhrnghva eyqdqrppld qplelapltt itfp
//
LOCUS       XP_061011098             574 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C2orf42 homolog [Dama dama].
ACCESSION   XP_061011098
VERSION     XP_061011098.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155115.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..574
                     /product="uncharacterized protein C2orf42 homolog"
                     /calculated_mol_wt=63842
     Region          16..57
                     /region_name="zf-tcix"
                     /note="Putative treble-clef, zinc-finger, Zn-binding;
                     pfam14952"
                     /db_xref="CDD:464398"
     CDS             1..574
                     /gene="C11H2orf42"
                     /coded_by="XM_061155115.1:52..1776"
                     /db_xref="GeneID:133064697"
ORIGIN      
        1 mepnslrtkv paflsdlgka tlrgirkcpr cgtyngtrgl scknktcgti frygarkqps
       61 veavkiitgs dlqvysvrqr drgpdyrcfv elgvsettiq tvdgtiitql ssgrcyvpsc
      121 lkaatqgvve nqcqhiklav ncqaeatplt lkssvlnamq aspetkqtiw qlateptgpl
      181 vqritknilv vkckasqkhs lgylhtsfvq kigakslper rffcscqtlk shksnaskde
      241 avprcihffa cicafasdet laqefsdfln fdssglkeii vpqlgchses pvsacestas
      301 kpkkrkkeev sgaqtnssll ppdavssnlr ksglkkpvva sslkrqacgq lldeaqvtls
      361 fqdwlasvte rihqtmhyqf dgkpeplvfh ipqsffdalq qrisigsakk rlpnsttafv
      421 rkdalplgtf skytwhitni lqvkqildtp empleitrsf iqnrdgtyel fkcpkveves
      481 iaetygriek qpvlrplelk tflkvgntsp dqkeptpfii ewipdilpqs kigelrikfe
      541 yghhrnghva eyqdqrppld qplelapltt itfp
//
LOCUS       XP_061011099             386 aa            linear   MAM 02-DEC-2023
DEFINITION  cytotoxic granule associated RNA binding protein TIA1 isoform X1
            [Dama dama].
ACCESSION   XP_061011099
VERSION     XP_061011099.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155116.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..386
                     /product="cytotoxic granule associated RNA binding protein
                     TIA1 isoform X1"
                     /calculated_mol_wt=42855
     Region          8..81
                     /region_name="RRM1_TIA1"
                     /note="RNA recognition motif 1 (RRM1) found in nucleolysin
                     TIA-1 isoform p40 (p40-TIA-1) and similar proteins;
                     cd12615"
                     /db_xref="CDD:410027"
     Region          104..181
                     /region_name="RRM2_TIA1"
                     /note="RNA recognition motif 2 (RRM2) found in nucleolysin
                     TIA-1 isoform p40 (p40-TIA-1) and similar proteins;
                     cd12618"
                     /db_xref="CDD:410030"
     Site            order(116,118,120,124,127,131..132)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:410030"
     Region          214..286
                     /region_name="RRM3_TIAR"
                     /note="RNA recognition motif 3 (RRM3) found in nucleolysin
                     TIAR and similar proteins; cd12620"
                     /db_xref="CDD:241064"
     CDS             1..386
                     /gene="TIA1"
                     /coded_by="XM_061155116.1:182..1342"
                     /db_xref="GeneID:133064698"
ORIGIN      
        1 medempktly vgnlsrdvte alilqlfsqi gpcknckmim dtagndpycf vefyehrhaa
       61 aalaamngrk imgkevkvnw attpssqkkd tssstvvstq rsqdhfhvfv gdlspeitte
      121 dikaafapfg risdarvvkd matgkskgyg fvsffnkwda enaiqqmggq wlggrqirtn
      181 watrkppapk styesntkql sydevvnqss psnctvycgg vtsglteqlm rqtfspfgqi
      241 meirvfpdkg ysfvrfnshe saahaivsvn gttieghvvk cywgketldm inpvqqqnqi
      301 gypqaygqwg qwygnaqqig qympngwqvp aygmygqpwn qqgfnqtqss ppwmgpnygv
      361 qpppgqngsm mpnqpagyrv agyetq
//
LOCUS       XP_061011100             385 aa            linear   MAM 02-DEC-2023
DEFINITION  cytotoxic granule associated RNA binding protein TIA1 isoform X2
            [Dama dama].
ACCESSION   XP_061011100
VERSION     XP_061011100.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155117.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..385
                     /product="cytotoxic granule associated RNA binding protein
                     TIA1 isoform X2"
                     /calculated_mol_wt=42727
     Region          8..81
                     /region_name="RRM1_TIA1"
                     /note="RNA recognition motif 1 (RRM1) found in nucleolysin
                     TIA-1 isoform p40 (p40-TIA-1) and similar proteins;
                     cd12615"
                     /db_xref="CDD:410027"
     Region          104..181
                     /region_name="RRM2_TIA1"
                     /note="RNA recognition motif 2 (RRM2) found in nucleolysin
                     TIA-1 isoform p40 (p40-TIA-1) and similar proteins;
                     cd12618"
                     /db_xref="CDD:410030"
     Site            order(116,118,120,124,127,131..132)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:410030"
     Region          214..286
                     /region_name="RRM3_TIAR"
                     /note="RNA recognition motif 3 (RRM3) found in nucleolysin
                     TIAR and similar proteins; cd12620"
                     /db_xref="CDD:241064"
     CDS             1..385
                     /gene="TIA1"
                     /coded_by="XM_061155117.1:188..1345"
                     /db_xref="GeneID:133064698"
ORIGIN      
        1 medempktly vgnlsrdvte alilqlfsqi gpcknckmim dtagndpycf vefyehrhaa
       61 aalaamngrk imgkevkvnw attpssqkkd tssstvvstq rsqdhfhvfv gdlspeitte
      121 dikaafapfg risdarvvkd matgkskgyg fvsffnkwda enaiqqmggq wlggrqirtn
      181 watrkppapk styesntkql sydevvnqss psnctvycgg vtsglteqlm rqtfspfgqi
      241 meirvfpdkg ysfvrfnshe saahaivsvn gttieghvvk cywgketldm inpvqqnqig
      301 ypqaygqwgq wygnaqqigq ympngwqvpa ygmygqpwnq qgfnqtqssp pwmgpnygvq
      361 pppgqngsmm pnqpagyrva gyetq
//
LOCUS       XP_061011101             375 aa            linear   MAM 02-DEC-2023
DEFINITION  cytotoxic granule associated RNA binding protein TIA1 isoform X3
            [Dama dama].
ACCESSION   XP_061011101
VERSION     XP_061011101.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155118.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..375
                     /product="cytotoxic granule associated RNA binding protein
                     TIA1 isoform X3"
                     /calculated_mol_wt=41693
     Region          8..81
                     /region_name="RRM1_TIA1"
                     /note="RNA recognition motif 1 (RRM1) found in nucleolysin
                     TIA-1 isoform p40 (p40-TIA-1) and similar proteins;
                     cd12615"
                     /db_xref="CDD:410027"
     Region          93..170
                     /region_name="RRM2_TIA1"
                     /note="RNA recognition motif 2 (RRM2) found in nucleolysin
                     TIA-1 isoform p40 (p40-TIA-1) and similar proteins;
                     cd12618"
                     /db_xref="CDD:410030"
     Site            order(105,107,109,113,116,120..121)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:410030"
     Region          203..275
                     /region_name="RRM3_TIAR"
                     /note="RNA recognition motif 3 (RRM3) found in nucleolysin
                     TIAR and similar proteins; cd12620"
                     /db_xref="CDD:241064"
     CDS             1..375
                     /gene="TIA1"
                     /coded_by="XM_061155118.1:183..1310"
                     /db_xref="GeneID:133064698"
ORIGIN      
        1 medempktly vgnlsrdvte alilqlfsqi gpcknckmim dtagndpycf vefyehrhaa
       61 aalaamngrk imgkevkvnw attpssqkkd tsnhfhvfvg dlspeitted ikaafapfgr
      121 isdarvvkdm atgkskgygf vsffnkwdae naiqqmggqw lggrqirtnw atrkppapks
      181 tyesntkqls ydevvnqssp snctvycggv tsglteqlmr qtfspfgqim eirvfpdkgy
      241 sfvrfnshes aahaivsvng ttieghvvkc ywgketldmi npvqqqnqig ypqaygqwgq
      301 wygnaqqigq ympngwqvpa ygmygqpwnq qgfnqtqssp pwmgpnygvq pppgqngsmm
      361 pnqpagyrva gyetq
//
LOCUS       XP_061011102             374 aa            linear   MAM 02-DEC-2023
DEFINITION  cytotoxic granule associated RNA binding protein TIA1 isoform X4
            [Dama dama].
ACCESSION   XP_061011102
VERSION     XP_061011102.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155119.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..374
                     /product="cytotoxic granule associated RNA binding protein
                     TIA1 isoform X4"
                     /calculated_mol_wt=41565
     Region          8..81
                     /region_name="RRM1_TIA1"
                     /note="RNA recognition motif 1 (RRM1) found in nucleolysin
                     TIA-1 isoform p40 (p40-TIA-1) and similar proteins;
                     cd12615"
                     /db_xref="CDD:410027"
     Region          93..170
                     /region_name="RRM2_TIA1"
                     /note="RNA recognition motif 2 (RRM2) found in nucleolysin
                     TIA-1 isoform p40 (p40-TIA-1) and similar proteins;
                     cd12618"
                     /db_xref="CDD:410030"
     Site            order(105,107,109,113,116,120..121)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:410030"
     Region          203..275
                     /region_name="RRM3_TIAR"
                     /note="RNA recognition motif 3 (RRM3) found in nucleolysin
                     TIAR and similar proteins; cd12620"
                     /db_xref="CDD:241064"
     CDS             1..374
                     /gene="TIA1"
                     /coded_by="XM_061155119.1:190..1314"
                     /db_xref="GeneID:133064698"
ORIGIN      
        1 medempktly vgnlsrdvte alilqlfsqi gpcknckmim dtagndpycf vefyehrhaa
       61 aalaamngrk imgkevkvnw attpssqkkd tsnhfhvfvg dlspeitted ikaafapfgr
      121 isdarvvkdm atgkskgygf vsffnkwdae naiqqmggqw lggrqirtnw atrkppapks
      181 tyesntkqls ydevvnqssp snctvycggv tsglteqlmr qtfspfgqim eirvfpdkgy
      241 sfvrfnshes aahaivsvng ttieghvvkc ywgketldmi npvqqnqigy pqaygqwgqw
      301 ygnaqqigqy mpngwqvpay gmygqpwnqq gfnqtqsspp wmgpnygvqp ppgqngsmmp
      361 nqpagyrvag yetq
//
LOCUS       XP_061011103             285 aa            linear   MAM 02-DEC-2023
DEFINITION  cytotoxic granule associated RNA binding protein TIA1 isoform X5
            [Dama dama].
ACCESSION   XP_061011103
VERSION     XP_061011103.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155120.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..285
                     /product="cytotoxic granule associated RNA binding protein
                     TIA1 isoform X5"
                     /calculated_mol_wt=31683
     Region          6..80
                     /region_name="RRM2_TIA1_like"
                     /note="RNA recognition motif 2 (RRM2) found in
                     granule-associated RNA binding proteins p40-TIA-1 and
                     TIAR; cd12353"
                     /db_xref="CDD:409789"
     Site            order(15,17,19,23,26,30..31)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:409789"
     Region          113..185
                     /region_name="RRM3_TIAR"
                     /note="RNA recognition motif 3 (RRM3) found in nucleolysin
                     TIAR and similar proteins; cd12620"
                     /db_xref="CDD:241064"
     CDS             1..285
                     /gene="TIA1"
                     /coded_by="XM_061155120.1:199..1056"
                     /db_xref="GeneID:133064698"
ORIGIN      
        1 mqdhfhvfvg dlspeitted ikaafapfgr isdarvvkdm atgkskgygf vsffnkwdae
       61 naiqqmggqw lggrqirtnw atrkppapks tyesntkqls ydevvnqssp snctvycggv
      121 tsglteqlmr qtfspfgqim eirvfpdkgy sfvrfnshes aahaivsvng ttieghvvkc
      181 ywgketldmi npvqqqnqig ypqaygqwgq wygnaqqigq ympngwqvpa ygmygqpwnq
      241 qgfnqtqssp pwmgpnygvq pppgqngsmm pnqpagyrva gyetq
//
LOCUS       XP_061011104             246 aa            linear   MAM 02-DEC-2023
DEFINITION  cytotoxic granule associated RNA binding protein TIA1 isoform X6
            [Dama dama].
ACCESSION   XP_061011104
VERSION     XP_061011104.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155121.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..246
                     /product="cytotoxic granule associated RNA binding protein
                     TIA1 isoform X6"
                     /calculated_mol_wt=27341
     Region          <1..41
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          <4..>234
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     Region          74..146
                     /region_name="RRM3_TIAR"
                     /note="RNA recognition motif 3 (RRM3) found in nucleolysin
                     TIAR and similar proteins; cd12620"
                     /db_xref="CDD:241064"
     CDS             1..246
                     /gene="TIA1"
                     /coded_by="XM_061155121.1:215..955"
                     /db_xref="GeneID:133064698"
ORIGIN      
        1 matgkskgyg fvsffnkwda enaiqqmggq wlggrqirtn watrkppapk styesntkql
       61 sydevvnqss psnctvycgg vtsglteqlm rqtfspfgqi meirvfpdkg ysfvrfnshe
      121 saahaivsvn gttieghvvk cywgketldm inpvqqqnqi gypqaygqwg qwygnaqqig
      181 qympngwqvp aygmygqpwn qqgfnqtqss ppwmgpnygv qpppgqngsm mpnqpagyrv
      241 agyetq
//
LOCUS       XP_061011105             246 aa            linear   MAM 02-DEC-2023
DEFINITION  cytotoxic granule associated RNA binding protein TIA1 isoform X6
            [Dama dama].
ACCESSION   XP_061011105
VERSION     XP_061011105.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155122.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..246
                     /product="cytotoxic granule associated RNA binding protein
                     TIA1 isoform X6"
                     /calculated_mol_wt=27341
     Region          <1..41
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          <4..>234
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     Region          74..146
                     /region_name="RRM3_TIAR"
                     /note="RNA recognition motif 3 (RRM3) found in nucleolysin
                     TIAR and similar proteins; cd12620"
                     /db_xref="CDD:241064"
     CDS             1..246
                     /gene="TIA1"
                     /coded_by="XM_061155122.1:177..917"
                     /db_xref="GeneID:133064698"
ORIGIN      
        1 matgkskgyg fvsffnkwda enaiqqmggq wlggrqirtn watrkppapk styesntkql
       61 sydevvnqss psnctvycgg vtsglteqlm rqtfspfgqi meirvfpdkg ysfvrfnshe
      121 saahaivsvn gttieghvvk cywgketldm inpvqqqnqi gypqaygqwg qwygnaqqig
      181 qympngwqvp aygmygqpwn qqgfnqtqss ppwmgpnygv qpppgqngsm mpnqpagyrv
      241 agyetq
//
LOCUS       XP_061011108             356 aa            linear   MAM 02-DEC-2023
DEFINITION  poly(rC)-binding protein 1 [Dama dama].
ACCESSION   XP_061011108
VERSION     XP_061011108.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155125.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..356
                     /product="poly(rC)-binding protein 1"
                     /calculated_mol_wt=37367
     Region          13..82
                     /region_name="KH-I_PCBP1_2_rpt1"
                     /note="first type I K homology (KH) RNA-binding domain
                     found in poly(rC)-binding protein 1 (PCBP1) and similar
                     proteins; cd22515"
                     /db_xref="CDD:411943"
     Site            order(22,26..27,29..33,36,40,48..51,53,57)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:411943"
     Region          92..169
                     /region_name="KH-I_PCBP1_2_rpt2"
                     /note="second type I K homology (KH) RNA-binding domain
                     found in poly(rC)-binding protein 1 (PCBP1) and similar
                     proteins; cd22518"
                     /db_xref="CDD:411946"
     Site            order(105,110..111,113..117,120,124,132..134,140,144)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:411946"
     Region          276..351
                     /region_name="KH-I_PCBP1_2_rpt3"
                     /note="third type I K homology (KH) RNA-binding domain
                     found in poly(rC)-binding protein 1 (PCBP1) and similar
                     proteins; cd22521"
                     /db_xref="CDD:411949"
     Site            order(289..293,295..299,301..303,306,314..315,317,325,350)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:411949"
     CDS             1..356
                     /gene="PCBP1"
                     /coded_by="XM_061155125.1:163..1233"
                     /db_xref="GeneID:133064702"
ORIGIN      
        1 mdagvtesgl nvtltirllm hgkevgsiig kkgesvkrir eesgarinis egncperiit
       61 ltgptnaifk afamiidkle edinssmtns taasrppvtl rlvvpatqcg sligkggcki
      121 keirestgaq vqvagdmlpn steraitiag vpqsvtecvk qiclvmletl sqspqgrvmt
      181 ipyqpmpass pvicaggqdr csdaagypha thdlegppld aysiqgqhti spldlaklnq
      241 varqqshfam mhggtgfagi dssspevkgy wasldastqt theltipnnl igciigrqga
      301 nineirqmsg aqikianpve gssgrqvtit gsaasislaq ylinarlsse kgmgcs
//
LOCUS       XP_061011109             222 aa            linear   MAM 02-DEC-2023
DEFINITION  max dimerization protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061011109
VERSION     XP_061011109.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155126.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..222
                     /product="max dimerization protein 1 isoform X1"
                     /calculated_mol_wt=25244
     Region          60..136
                     /region_name="bHLHzip_Mad1"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in protein Max-associated protein 1 (Mad1) and
                     similar proteins; cd18931"
                     /db_xref="CDD:381501"
     Site            order(61..62,65..66,68..69,73,92..94)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381501"
     Site            order(72..73,75..80,82..83,95,98,102,104..106,108..109,
                     111..112,115,119,122..123,125..126,129..130,132..133)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381501"
     Site            order(72,75..76,78..79,82..83,95,98,102,104..106,108..109,
                     111..112,115,119,122..123,125..126,129..130,132..133)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:381501"
     CDS             1..222
                     /gene="MXD1"
                     /coded_by="XM_061155126.1:238..906"
                     /db_xref="GeneID:133064705"
ORIGIN      
        1 maaavrmniq mlleaadyle rrereaehgy asmlpynnkd rdalkrrsks kknnsssrst
       61 hnemeknrra hlrlcleklk glvplgpesn rhttlslltk aklhikkled cdrkaihqid
      121 qlqreqrhlk rqleklgier irmdstgstv ssersdsdre eidvdvestd yltgdldwsc
      181 ssvsdsderg smqslgsdeg yssssvkrik lqdshkttcl gl
//
LOCUS       XP_061011110             190 aa            linear   MAM 02-DEC-2023
DEFINITION  max dimerization protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061011110
VERSION     XP_061011110.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155127.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..190
                     /product="max dimerization protein 1 isoform X2"
                     /calculated_mol_wt=21566
     Region          28..104
                     /region_name="bHLHzip_Mad1"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in protein Max-associated protein 1 (Mad1) and
                     similar proteins; cd18931"
                     /db_xref="CDD:381501"
     Site            order(29..30,33..34,36..37,41,60..62)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381501"
     Site            order(40..41,43..48,50..51,63,66,70,72..74,76..77,79..80,
                     83,87,90..91,93..94,97..98,100..101)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381501"
     Site            order(40,43..44,46..47,50..51,63,66,70,72..74,76..77,
                     79..80,83,87,90..91,93..94,97..98,100..101)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:381501"
     CDS             1..190
                     /gene="MXD1"
                     /coded_by="XM_061155127.1:566..1138"
                     /db_xref="GeneID:133064705"
ORIGIN      
        1 mlpynnkdrd alkrrskskk nnsssrsthn emeknrrahl rlcleklkgl vplgpesnrh
       61 ttlslltkak lhikkledcd rkaihqidql qreqrhlkrq leklgierir mdstgstvss
      121 ersdsdreei dvdvestdyl tgdldwscss vsdsdergsm qslgsdegys sssvkriklq
      181 dshkttclgl
//
LOCUS       XP_061011111             206 aa            linear   MAM 02-DEC-2023
DEFINITION  U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Dama
            dama].
ACCESSION   XP_061011111
VERSION     XP_061011111.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155128.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..206
                     /product="U4/U6.U5 small nuclear ribonucleoprotein 27 kDa
                     protein"
                     /calculated_mol_wt=23975
     Region          149..205
                     /region_name="SNRNP27"
                     /note="U4/U6.U5 small nuclear ribonucleoproteins;
                     pfam08648"
                     /db_xref="CDD:462548"
     CDS             1..206
                     /gene="SNRNP27"
                     /coded_by="XM_061155128.1:16..636"
                     /db_xref="GeneID:133064707"
ORIGIN      
        1 mrryqvgaas lrrnpgesfg rfpvgressv pgppgsccta vsgstctggf qmgrsrsrsp
       61 rrerrrsrst srererrrre rsrsrerdrr rsrsrsphrr rsrsprrhrs tspspsrlke
      121 rrdeekketk etkskerqit eedlegktee eiemmklmgf asfdstkgkk vdgsvnayai
      181 nvsqkrkyrq ymnrkggfnr pldfia
//
LOCUS       XP_061011113             526 aa            linear   MAM 02-DEC-2023
DEFINITION  germ cell-less protein-like 1 [Dama dama].
ACCESSION   XP_061011113
VERSION     XP_061011113.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155130.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..526
                     /product="germ cell-less protein-like 1"
                     /calculated_mol_wt=59882
     Region          93..207
                     /region_name="BTB_POZ_GCL"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in Drosophila
                     melanogaster protein germ cell-less (GCL) and similar
                     proteins; cd18305"
                     /db_xref="CDD:349614"
     Region          208..285
                     /region_name="BACK_GCL"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     Drosophila melanogaster protein germ cell-less (GCL) and
                     similar proteins; cd18495"
                     /db_xref="CDD:350570"
     CDS             1..526
                     /gene="GMCL1"
                     /coded_by="XM_061155130.1:255..1835"
                     /db_xref="GeneID:133064709"
ORIGIN      
        1 mgslssrvlr hpgraraqqe pasgaggsar rpetggdapg hgfcycpgsh krkrssgafc
       61 ycnpdsetde deeegdeqqr llntprrkkl kstskyiyqt lflngensdi kicalgeews
      121 lhkiylcqsg yfssmfsgsw kessmntiel eipdqnidie alqvafgsly rddvlikpsr
      181 viailaaacm lqldgliqqc getmketinv ktvcgyytsa gtygldsvkk kclewllnnl
      241 mthqnvelfk elsinvmkql igssnlfvmq vemdvytalk kwmflqlvps wngslkqllt
      301 etdvwfskrr kdfegmtfle teqgkpfvsv frhlrlqyii sdlasariie qdslvpsewl
      361 ssvykqqwla mlraeqdsev gpqeinkeel egnsmrcgrk lakdgeycwr wtgfnfgfdl
      421 lvtytnryii fkrntlnqpc sgsvslqprr siafrlrlas fdssgklics rttgyqiltl
      481 ekdqeqvvmn ldsrllifpl yiccnflyis pekrtenshh penpen
//
LOCUS       XP_061011114             319 aa            linear   MAM 02-DEC-2023
DEFINITION  annexin A4 [Dama dama].
ACCESSION   XP_061011114
VERSION     XP_061011114.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155131.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..319
                     /product="annexin A4"
                     /calculated_mol_wt=35735
     Region          19..83
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     Region          90..155
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     Region          173..239
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     Region          249..314
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     CDS             1..319
                     /gene="ANXA4"
                     /coded_by="XM_061155131.1:185..1144"
                     /db_xref="GeneID:133064710"
ORIGIN      
        1 maakggtvka asgfnaaeda qtlrkamkgl gtdedaiinv layrstaqrq eirtayktti
       61 grdlmddlks elsgnfeqvi lgmmtptvly dvhelrkamk gagtdegcli eilasrtpee
      121 irrinqtyql qygrsleddi rsdtsfmfqr vlvslsaggr desnylddal vrqdaqdlye
      181 agekkwgtde vkfltilcsr nrnhllhvfd eykriaqkdv eqsiksetsg sfedallaiv
      241 kcmrnksayf aerlyksmkg lgtdddtlir vmvsraeidm ldiranfkrl ygkslysfik
      301 gdtsgdyrkv llilcggdd
//
LOCUS       XP_061011115             319 aa            linear   MAM 02-DEC-2023
DEFINITION  annexin A4 [Dama dama].
ACCESSION   XP_061011115
VERSION     XP_061011115.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155132.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..319
                     /product="annexin A4"
                     /calculated_mol_wt=35735
     Region          19..83
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     Region          90..155
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     Region          173..239
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     Region          249..314
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     CDS             1..319
                     /gene="ANXA4"
                     /coded_by="XM_061155132.1:381..1340"
                     /db_xref="GeneID:133064710"
ORIGIN      
        1 maakggtvka asgfnaaeda qtlrkamkgl gtdedaiinv layrstaqrq eirtayktti
       61 grdlmddlks elsgnfeqvi lgmmtptvly dvhelrkamk gagtdegcli eilasrtpee
      121 irrinqtyql qygrsleddi rsdtsfmfqr vlvslsaggr desnylddal vrqdaqdlye
      181 agekkwgtde vkfltilcsr nrnhllhvfd eykriaqkdv eqsiksetsg sfedallaiv
      241 kcmrnksayf aerlyksmkg lgtdddtlir vmvsraeidm ldiranfkrl ygkslysfik
      301 gdtsgdyrkv llilcggdd
//
LOCUS       XP_061011116            1298 aa            linear   MAM 02-DEC-2023
DEFINITION  AP2-associated protein kinase 1 isoform X1 [Dama dama].
ACCESSION   XP_061011116
VERSION     XP_061011116.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155133.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1298
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1298
                     /product="AP2-associated protein kinase 1 isoform X1"
                     /calculated_mol_wt=139151
     Region          43..317
                     /region_name="STKc_NAK_like"
                     /note="Catalytic domain of Numb-Associated Kinase
                     (NAK)-like Serine/Threonine kinases; cd14037"
                     /db_xref="CDD:270939"
     Site            order(53..57,61,73,75,105,127..130,134,136,177,179,
                     181..182,184,195,198,222..225)
                     /site_type="active"
                     /db_xref="CDD:270939"
     Site            order(53..57,61,73,75,105,127..130,134,177,179,181..182,
                     184,195)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270939"
     Site            order(57,134,136,177,179,181,198,222..225)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270939"
     Site            order(194..208,209..225)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270939"
     Region          <323..485
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1083..1293
                     /region_name="BMP2K_C"
                     /note="BMP-2-inducible protein kinase C-terminus;
                     pfam15282"
                     /db_xref="CDD:464612"
     CDS             1..1298
                     /gene="AAK1"
                     /coded_by="XM_061155133.1:370..4266"
                     /db_xref="GeneID:133064711"
ORIGIN      
        1 mmkkffdsrr eqggsglgsg ssggggstsg lgsgyigrvf gigrqqvtvd evlaeggfai
       61 vflvrtsngm kcalkrmfvn nehdlqvckr eiqimrdlsg hknivgyids sinsvssgdv
      121 wevlilmdfc rggqvvnlmn qrlqtgften evlqifcdtc eavarlhqck tpiihrdlkv
      181 enillhdrgh yvlcdfgsat nkfqnpqteg vnavedeikk yttlsyrape mvnlysgkvi
      241 ttkadiwalg cllyklcyft lpfgesqvai cdgnftipdn srysqdmhcl irymlepdpd
      301 krpdiyqvsy fsfkllkkec pipnvqnspi ptklpepvka seaaakktqp karltdpipt
      361 tetsiaprqr pkagqtqpnp gilpiqpalt prkratvqpp pqaavssnqp gllasvpqpk
      421 tqpppsqplp qsqpkqpqap ptsqqppsap apalpaqaqa tpqhqqqlfl kqqppqtapp
      481 aqqpagafyq qpqqqaqapq fqavhpaaqq pviaqfpvvs qgssqqqliq nfyqqqqqqq
      541 qlatalhqqq lltqqaalqq kaaaaavpqp qaqpaaaapp apaqepaiqa pvrqqpkvqt
      601 tppptiqgqk lgsltppssp kaqraghrri lsdvthsavf gvpaskstql lqaaaaeasl
      661 nksksatttp sgsprasqqn vynpsegstw npfdddnfsk ltaeellnkd faklgegkyp
      721 eklggsaesl ipgfqptqgd afaassfsag taekrkggqt vdsslpllsv sdpfiplqvp
      781 dapekliegl kspdtslllp dllpmtdpfg stsdavieka dvaveslipg leppvpqrlp
      841 sqtesvtsnr tdsltgedsl idcsllsnpt tdlleefapi aisapahkaa edsnlisgfd
      901 vpegsdkvte defdpipvli tknpqglqre pipspvitve hfkestgvkg lplypdpsrv
      961 pgtktqnsle sdylardgps snssfhssee egtdlegdml dcsgsrplll eseeedesck
     1021 plqgklggat pftqpevtpa qakalqggrk nqfgaltqpt adglgepdvf atapfrssrv
     1081 paddmdifak apfvskgsva psqpdetdvf lrapftkkkg meestvaqsp aqeqpgllsq
     1141 tddipllpgl dravypsira qysmagfaqp snlpshpvqa adhldsissr gsslesgahp
     1201 ndrnkgpqpq keavsgpmag kpfrpqslsk ysrhyspede pnpeaqpiaa ykivsqtnkq
     1261 siagsvsits lssrttelpa adpfalapfp sksgkqkp
//
LOCUS       XP_061011117            1225 aa            linear   MAM 02-DEC-2023
DEFINITION  AP2-associated protein kinase 1 isoform X2 [Dama dama].
ACCESSION   XP_061011117
VERSION     XP_061011117.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155134.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1225
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1225
                     /product="AP2-associated protein kinase 1 isoform X2"
                     /calculated_mol_wt=131441
     Region          43..317
                     /region_name="STKc_NAK_like"
                     /note="Catalytic domain of Numb-Associated Kinase
                     (NAK)-like Serine/Threonine kinases; cd14037"
                     /db_xref="CDD:270939"
     Site            order(53..57,61,73,75,105,127..130,134,136,177,179,
                     181..182,184,195,198,222..225)
                     /site_type="active"
                     /db_xref="CDD:270939"
     Site            order(53..57,61,73,75,105,127..130,134,177,179,181..182,
                     184,195)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270939"
     Site            order(57,134,136,177,179,181,198,222..225)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270939"
     Site            order(194..208,209..225)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270939"
     Region          <323..485
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1010..1220
                     /region_name="BMP2K_C"
                     /note="BMP-2-inducible protein kinase C-terminus;
                     pfam15282"
                     /db_xref="CDD:464612"
     CDS             1..1225
                     /gene="AAK1"
                     /coded_by="XM_061155134.1:370..4047"
                     /db_xref="GeneID:133064711"
ORIGIN      
        1 mmkkffdsrr eqggsglgsg ssggggstsg lgsgyigrvf gigrqqvtvd evlaeggfai
       61 vflvrtsngm kcalkrmfvn nehdlqvckr eiqimrdlsg hknivgyids sinsvssgdv
      121 wevlilmdfc rggqvvnlmn qrlqtgften evlqifcdtc eavarlhqck tpiihrdlkv
      181 enillhdrgh yvlcdfgsat nkfqnpqteg vnavedeikk yttlsyrape mvnlysgkvi
      241 ttkadiwalg cllyklcyft lpfgesqvai cdgnftipdn srysqdmhcl irymlepdpd
      301 krpdiyqvsy fsfkllkkec pipnvqnspi ptklpepvka seaaakktqp karltdpipt
      361 tetsiaprqr pkagqtqpnp gilpiqpalt prkratvqpp pqaavssnqp gllasvpqpk
      421 tqpppsqplp qsqpkqpqap ptsqqppsap apalpaqaqa tpqhqqqlfl kqqppqtapp
      481 aqqpagafyq qpqqqaqapq fqavhpaaqq pviaqfpvvs qgssqqqliq nfyqqqqqqq
      541 qlatalhqqq lltqqaalqq kaaaaavpqp qaqpaaaapp apaqepaqiq apvrqqpkvq
      601 ttppptiqgq klgsltppss pkaqraghrr ilsdvthsav fgvpaskstq llqaaaaeas
      661 lnksksattt psgsprasqq nvynpsegst wnpfdddnfs kltaeellnk dfaklgegky
      721 peklggsaes lipgfqptqg dafaassfsa gtaekrkggq tvdsslplls vsdpfiplqv
      781 pdapeklieg lkspdtslll pdllpmtdpf gstsdaviek advaveslip gleppvpqrl
      841 psqtesvtsn rtglqrepip spvitvehfk estgvkglpl ypdpsrvpgt ktqnslesdy
      901 lardgpssns sfhsseeegt dlegdmldcs gsrplllese eedesckplq gklggatpft
      961 qpevtpaqak alqggrknqf galtqptadg lgepdvfata pfrssrvpad dmdifakapf
     1021 vskgsvapsq pdetdvflra pftkkkgmee stvaqspaqe qpgllsqtdd ipllpgldra
     1081 vypsiraqys magfaqpsnl pshpvqaadh ldsissrgss lesgahpndr nkgpqpqkea
     1141 vsgpmagkpf rpqslskysr hyspedepnp eaqpiaayki vsqtnkqsia gsvsitslss
     1201 rttelpaadp falapfpsks gkqkp
//
LOCUS       XP_061011118            1157 aa            linear   MAM 02-DEC-2023
DEFINITION  AP2-associated protein kinase 1 isoform X3 [Dama dama].
ACCESSION   XP_061011118
VERSION     XP_061011118.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155135.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1157
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1157
                     /product="AP2-associated protein kinase 1 isoform X3"
                     /calculated_mol_wt=124217
     Region          43..317
                     /region_name="STKc_NAK_like"
                     /note="Catalytic domain of Numb-Associated Kinase
                     (NAK)-like Serine/Threonine kinases; cd14037"
                     /db_xref="CDD:270939"
     Site            order(53..57,61,73,75,105,127..130,134,136,177,179,
                     181..182,184,195,198,222..225)
                     /site_type="active"
                     /db_xref="CDD:270939"
     Site            order(53..57,61,73,75,105,127..130,134,177,179,181..182,
                     184,195)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270939"
     Site            order(57,134,136,177,179,181,198,222..225)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270939"
     Site            order(194..208,209..225)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270939"
     Region          <323..485
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          942..1152
                     /region_name="BMP2K_C"
                     /note="BMP-2-inducible protein kinase C-terminus;
                     pfam15282"
                     /db_xref="CDD:464612"
     CDS             1..1157
                     /gene="AAK1"
                     /coded_by="XM_061155135.1:370..3843"
                     /db_xref="GeneID:133064711"
ORIGIN      
        1 mmkkffdsrr eqggsglgsg ssggggstsg lgsgyigrvf gigrqqvtvd evlaeggfai
       61 vflvrtsngm kcalkrmfvn nehdlqvckr eiqimrdlsg hknivgyids sinsvssgdv
      121 wevlilmdfc rggqvvnlmn qrlqtgften evlqifcdtc eavarlhqck tpiihrdlkv
      181 enillhdrgh yvlcdfgsat nkfqnpqteg vnavedeikk yttlsyrape mvnlysgkvi
      241 ttkadiwalg cllyklcyft lpfgesqvai cdgnftipdn srysqdmhcl irymlepdpd
      301 krpdiyqvsy fsfkllkkec pipnvqnspi ptklpepvka seaaakktqp karltdpipt
      361 tetsiaprqr pkagqtqpnp gilpiqpalt prkratvqpp pqaavssnqp gllasvpqpk
      421 tqpppsqplp qsqpkqpqap ptsqqppsap apalpaqaqa tpqhqqqlfl kqqppqtapp
      481 aqqpagafyq qpqqqaqapq fqavhpaaqq pviaqfpvvs qgssqqqliq nfyqqqqqqq
      541 qlatalhqqq lltqqaalqq kaaaaavpqp qaqpaaaapp apaqepaqiq apvrqqpkvq
      601 ttppptiqgq klgsltppss pkaqraghrr ilsdvthsav fgvpaskstq llqaaaaeas
      661 lnksksattt psgsprasqq nvynpsegst wnpfdddnfs kltaeellnk dfaklgegky
      721 peklggsaes lipgfqptqg dafaassfsa gtaekrkggq tvdsslplls vsdpfiplqv
      781 pdapglqrep ipspvitveh fkestgvkgl plypdpsrvp gtktqnsles dylardgpss
      841 nssfhsseee gtdlegdmld csgsrpllle seeedesckp lqgklggatp ftqpevtpaq
      901 akalqggrkn qfgaltqpta dglgepdvfa tapfrssrvp addmdifaka pfvskgsvap
      961 sqpdetdvfl rapftkkkgm eestvaqspa qeqpgllsqt ddipllpgld ravypsiraq
     1021 ysmagfaqps nlpshpvqaa dhldsissrg sslesgahpn drnkgpqpqk eavsgpmagk
     1081 pfrpqslsky srhyspedep npeaqpiaay kivsqtnkqs iagsvsitsl ssrttelpaa
     1141 dpfalapfps ksgkqkp
//
LOCUS       XP_061011119            1125 aa            linear   MAM 02-DEC-2023
DEFINITION  AP2-associated protein kinase 1 isoform X4 [Dama dama].
ACCESSION   XP_061011119
VERSION     XP_061011119.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155136.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1125
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1125
                     /product="AP2-associated protein kinase 1 isoform X4"
                     /calculated_mol_wt=120872
     Region          43..317
                     /region_name="STKc_NAK_like"
                     /note="Catalytic domain of Numb-Associated Kinase
                     (NAK)-like Serine/Threonine kinases; cd14037"
                     /db_xref="CDD:270939"
     Site            order(53..57,61,73,75,105,127..130,134,136,177,179,
                     181..182,184,195,198,222..225)
                     /site_type="active"
                     /db_xref="CDD:270939"
     Site            order(53..57,61,73,75,105,127..130,134,177,179,181..182,
                     184,195)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270939"
     Site            order(57,134,136,177,179,181,198,222..225)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270939"
     Site            order(194..208,209..225)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270939"
     Region          <323..485
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          910..1120
                     /region_name="BMP2K_C"
                     /note="BMP-2-inducible protein kinase C-terminus;
                     pfam15282"
                     /db_xref="CDD:464612"
     CDS             1..1125
                     /gene="AAK1"
                     /coded_by="XM_061155136.1:370..3747"
                     /db_xref="GeneID:133064711"
ORIGIN      
        1 mmkkffdsrr eqggsglgsg ssggggstsg lgsgyigrvf gigrqqvtvd evlaeggfai
       61 vflvrtsngm kcalkrmfvn nehdlqvckr eiqimrdlsg hknivgyids sinsvssgdv
      121 wevlilmdfc rggqvvnlmn qrlqtgften evlqifcdtc eavarlhqck tpiihrdlkv
      181 enillhdrgh yvlcdfgsat nkfqnpqteg vnavedeikk yttlsyrape mvnlysgkvi
      241 ttkadiwalg cllyklcyft lpfgesqvai cdgnftipdn srysqdmhcl irymlepdpd
      301 krpdiyqvsy fsfkllkkec pipnvqnspi ptklpepvka seaaakktqp karltdpipt
      361 tetsiaprqr pkagqtqpnp gilpiqpalt prkratvqpp pqaavssnqp gllasvpqpk
      421 tqpppsqplp qsqpkqpqap ptsqqppsap apalpaqaqa tpqhqqqlfl kqqppqtapp
      481 aqqpagafyq qpqqqaqapq fqavhpaaqq pviaqfpvvs qgssqqqliq nfyqqqqqqq
      541 qlatalhqqq lltqqaalqq kaaaaavpqp qaqpaaaapp apaqepaqiq apvrqqpkvq
      601 ttppptiqgq klgsltppss pkaqraghrr ilsdvthsav fgvpaskstq llqaaaaeas
      661 lnksksattt psgsprasqq nvynpsegst wnpfdddnfs kltaeellnk dfaklgegky
      721 peklggsaes lipgfqptqg dafaassfsa gtglqrepip spvitvehfk estgvkglpl
      781 ypdpsrvpgt ktqnslesdy lardgpssns sfhsseeegt dlegdmldcs gsrplllese
      841 eedesckplq gklggatpft qpevtpaqak alqggrknqf galtqptadg lgepdvfata
      901 pfrssrvpad dmdifakapf vskgsvapsq pdetdvflra pftkkkgmee stvaqspaqe
      961 qpgllsqtdd ipllpgldra vypsiraqys magfaqpsnl pshpvqaadh ldsissrgss
     1021 lesgahpndr nkgpqpqkea vsgpmagkpf rpqslskysr hyspedepnp eaqpiaayki
     1081 vsqtnkqsia gsvsitslss rttelpaadp falapfpsks gkqkp
//
LOCUS       XP_061011120            1122 aa            linear   MAM 02-DEC-2023
DEFINITION  AP2-associated protein kinase 1 isoform X5 [Dama dama].
ACCESSION   XP_061011120
VERSION     XP_061011120.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155137.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1122
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1122
                     /product="AP2-associated protein kinase 1 isoform X5"
                     /calculated_mol_wt=120760
     Region          43..317
                     /region_name="STKc_NAK_like"
                     /note="Catalytic domain of Numb-Associated Kinase
                     (NAK)-like Serine/Threonine kinases; cd14037"
                     /db_xref="CDD:270939"
     Site            order(53..57,61,73,75,105,127..130,134,136,177,179,
                     181..182,184,195,198,222..225)
                     /site_type="active"
                     /db_xref="CDD:270939"
     Site            order(53..57,61,73,75,105,127..130,134,177,179,181..182,
                     184,195)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270939"
     Site            order(57,134,136,177,179,181,198,222..225)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270939"
     Site            order(194..208,209..225)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270939"
     Region          <323..485
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          907..1117
                     /region_name="BMP2K_C"
                     /note="BMP-2-inducible protein kinase C-terminus;
                     pfam15282"
                     /db_xref="CDD:464612"
     CDS             1..1122
                     /gene="AAK1"
                     /coded_by="XM_061155137.1:370..3738"
                     /db_xref="GeneID:133064711"
ORIGIN      
        1 mmkkffdsrr eqggsglgsg ssggggstsg lgsgyigrvf gigrqqvtvd evlaeggfai
       61 vflvrtsngm kcalkrmfvn nehdlqvckr eiqimrdlsg hknivgyids sinsvssgdv
      121 wevlilmdfc rggqvvnlmn qrlqtgften evlqifcdtc eavarlhqck tpiihrdlkv
      181 enillhdrgh yvlcdfgsat nkfqnpqteg vnavedeikk yttlsyrape mvnlysgkvi
      241 ttkadiwalg cllyklcyft lpfgesqvai cdgnftipdn srysqdmhcl irymlepdpd
      301 krpdiyqvsy fsfkllkkec pipnvqnspi ptklpepvka seaaakktqp karltdpipt
      361 tetsiaprqr pkagqtqpnp gilpiqpalt prkratvqpp pqaavssnqp gllasvpqpk
      421 tqpppsqplp qsqpkqpqap ptsqqppsap apalpaqaqa tpqhqqqlfl kqqppqtapp
      481 aqqpagafyq qpqqqaqapq fqavhpaaqq pviaqfpvvs qgssqqqliq nfyqqqqqqq
      541 qlatalhqqq lltqqaalqq kaaaaavpqp qaqpaaaapp apaqepaqiq apvrqqpkvq
      601 ttppptiqgq klgsltppss pkaqraghrr ilsdvthsav fgvpaskstq llqaaaaeas
      661 lnksksattt psgsprasqq nvynpsegst wnpfdddnfs kltaeellnk dfaklgeaek
      721 rkggqtvdss lpllsvsdpf iplqvpdapg lqrepipspv itvehfkest gvkglplypd
      781 psrvpgtktq nslesdylar dgpssnssfh sseeegtdle gdmldcsgsr pllleseeed
      841 esckplqgkl ggatpftqpe vtpaqakalq ggrknqfgal tqptadglge pdvfatapfr
      901 ssrvpaddmd ifakapfvsk gsvapsqpde tdvflrapft kkkgmeestv aqspaqeqpg
      961 llsqtddipl lpgldravyp siraqysmag faqpsnlpsh pvqaadhlds issrgssles
     1021 gahpndrnkg pqpqkeavsg pmagkpfrpq slskysrhys pedepnpeaq piaaykivsq
     1081 tnkqsiagsv sitslssrtt elpaadpfal apfpsksgkq kp
//
LOCUS       XP_061011121            1112 aa            linear   MAM 02-DEC-2023
DEFINITION  AP2-associated protein kinase 1 isoform X6 [Dama dama].
ACCESSION   XP_061011121
VERSION     XP_061011121.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155138.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1112
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1112
                     /product="AP2-associated protein kinase 1 isoform X6"
                     /calculated_mol_wt=119702
     Region          43..317
                     /region_name="STKc_NAK_like"
                     /note="Catalytic domain of Numb-Associated Kinase
                     (NAK)-like Serine/Threonine kinases; cd14037"
                     /db_xref="CDD:270939"
     Site            order(53..57,61,73,75,105,127..130,134,136,177,179,
                     181..182,184,195,198,222..225)
                     /site_type="active"
                     /db_xref="CDD:270939"
     Site            order(53..57,61,73,75,105,127..130,134,177,179,181..182,
                     184,195)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270939"
     Site            order(57,134,136,177,179,181,198,222..225)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270939"
     Site            order(194..208,209..225)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270939"
     Region          <336..>521
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     Region          897..1107
                     /region_name="BMP2K_C"
                     /note="BMP-2-inducible protein kinase C-terminus;
                     pfam15282"
                     /db_xref="CDD:464612"
     CDS             1..1112
                     /gene="AAK1"
                     /coded_by="XM_061155138.1:370..3708"
                     /db_xref="GeneID:133064711"
ORIGIN      
        1 mmkkffdsrr eqggsglgsg ssggggstsg lgsgyigrvf gigrqqvtvd evlaeggfai
       61 vflvrtsngm kcalkrmfvn nehdlqvckr eiqimrdlsg hknivgyids sinsvssgdv
      121 wevlilmdfc rggqvvnlmn qrlqtgften evlqifcdtc eavarlhqck tpiihrdlkv
      181 enillhdrgh yvlcdfgsat nkfqnpqteg vnavedeikk yttlsyrape mvnlysgkvi
      241 ttkadiwalg cllyklcyft lpfgesqvai cdgnftipdn srysqdmhcl irymlepdpd
      301 krpdiyqvsy fsfkllkkec pipnvqnspi ptklpepvka seaaakktqp karltdpipt
      361 tetsiaprqr pkagqtqpnp gilpiqpalt prkratvqpp pqaavssnqp gllasvpqpk
      421 tqpppsqplp qsqpkqpqap ptsqqppsap apalpaqaqa tpqhqqqlfl kqqppqtapp
      481 aqqpagafyq qpqqqaqapq fqavhpaaqq pviaqfpvvs qgssqqqliq nfyqqqqqqq
      541 qlatalhqqq lltqqaalqq kaaaaavpqp qaqpaaaapp apaqepaqiq apvrqqpkvq
      601 ttppptiqgq klgsltppss pkaqraghrr ilsdvthsav fgvpaskstq llqaaaaeas
      661 lnksksattt psgsprasqq nvynpsegst wnpfdddnfs kltaeellnk dfaklgegky
      721 peklggsaes lipgfqptqg lqrepipspv itvehfkest gvkglplypd psrvpgtktq
      781 nslesdylar dgpssnssfh sseeegtdle gdmldcsgsr pllleseeed esckplqgkl
      841 ggatpftqpe vtpaqakalq ggrknqfgal tqptadglge pdvfatapfr ssrvpaddmd
      901 ifakapfvsk gsvapsqpde tdvflrapft kkkgmeestv aqspaqeqpg llsqtddipl
      961 lpgldravyp siraqysmag faqpsnlpsh pvqaadhlds issrgssles gahpndrnkg
     1021 pqpqkeavsg pmagkpfrpq slskysrhys pedepnpeaq piaaykivsq tnkqsiagsv
     1081 sitslssrtt elpaadpfal apfpsksgkq kp
//
LOCUS       XP_061011122            1090 aa            linear   MAM 02-DEC-2023
DEFINITION  AP2-associated protein kinase 1 isoform X7 [Dama dama].
ACCESSION   XP_061011122
VERSION     XP_061011122.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155139.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1090
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1090
                     /product="AP2-associated protein kinase 1 isoform X7"
                     /calculated_mol_wt=117416
     Region          43..317
                     /region_name="STKc_NAK_like"
                     /note="Catalytic domain of Numb-Associated Kinase
                     (NAK)-like Serine/Threonine kinases; cd14037"
                     /db_xref="CDD:270939"
     Site            order(53..57,61,73,75,105,127..130,134,136,177,179,
                     181..182,184,195,198,222..225)
                     /site_type="active"
                     /db_xref="CDD:270939"
     Site            order(53..57,61,73,75,105,127..130,134,177,179,181..182,
                     184,195)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270939"
     Site            order(57,134,136,177,179,181,198,222..225)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270939"
     Site            order(194..208,209..225)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270939"
     Region          <336..>521
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     Region          875..1085
                     /region_name="BMP2K_C"
                     /note="BMP-2-inducible protein kinase C-terminus;
                     pfam15282"
                     /db_xref="CDD:464612"
     CDS             1..1090
                     /gene="AAK1"
                     /coded_by="XM_061155139.1:370..3642"
                     /db_xref="GeneID:133064711"
ORIGIN      
        1 mmkkffdsrr eqggsglgsg ssggggstsg lgsgyigrvf gigrqqvtvd evlaeggfai
       61 vflvrtsngm kcalkrmfvn nehdlqvckr eiqimrdlsg hknivgyids sinsvssgdv
      121 wevlilmdfc rggqvvnlmn qrlqtgften evlqifcdtc eavarlhqck tpiihrdlkv
      181 enillhdrgh yvlcdfgsat nkfqnpqteg vnavedeikk yttlsyrape mvnlysgkvi
      241 ttkadiwalg cllyklcyft lpfgesqvai cdgnftipdn srysqdmhcl irymlepdpd
      301 krpdiyqvsy fsfkllkkec pipnvqnspi ptklpepvka seaaakktqp karltdpipt
      361 tetsiaprqr pkagqtqpnp gilpiqpalt prkratvqpp pqaavssnqp gllasvpqpk
      421 tqpppsqplp qsqpkqpqap ptsqqppsap apalpaqaqa tpqhqqqlfl kqqppqtapp
      481 aqqpagafyq qpqqqaqapq fqavhpaaqq pviaqfpvvs qgssqqqliq nfyqqqqqqq
      541 qlatalhqqq lltqqaalqq kaaaaavpqp qaqpaaaapp apaqepaqiq apvrqqpkvq
      601 ttppptiqgq klgsltppss pkaqraghrr ilsdvthsav fgvpaskstq llqaaaaeas
      661 lnksksattt psgsprasqq nvynpsegst wnpfdddnfs kltaeellnk dfaklgeglq
      721 repipspvit vehfkestgv kglplypdps rvpgtktqns lesdylardg pssnssfhss
      781 eeegtdlegd mldcsgsrpl lleseeedes ckplqgklgg atpftqpevt paqakalqgg
      841 rknqfgaltq ptadglgepd vfatapfrss rvpaddmdif akapfvskgs vapsqpdetd
      901 vflrapftkk kgmeestvaq spaqeqpgll sqtddipllp gldravypsi raqysmagfa
      961 qpsnlpshpv qaadhldsis srgsslesga hpndrnkgpq pqkeavsgpm agkpfrpqsl
     1021 skysrhyspe depnpeaqpi aaykivsqtn kqsiagsvsi tslssrttel paadpfalap
     1081 fpsksgkqkp
//
LOCUS       XP_061011123             253 aa            linear   MAM 02-DEC-2023
DEFINITION  NFU1 iron-sulfur cluster scaffold homolog, mitochondrial [Dama
            dama].
ACCESSION   XP_061011123
VERSION     XP_061011123.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155140.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..253
                     /product="NFU1 iron-sulfur cluster scaffold homolog,
                     mitochondrial"
                     /calculated_mol_wt=27951
     Region          60..147
                     /region_name="Nfu_N"
                     /note="Scaffold protein Nfu/NifU N terminal; smart00932"
                     /db_xref="CDD:214919"
     Region          65..239
                     /region_name="NifU"
                     /note="Fe-S cluster biogenesis protein NfuA,
                     4Fe-4S-binding domain [Posttranslational modification,
                     protein turnover, chaperones]; COG0694"
                     /db_xref="CDD:440458"
     CDS             1..253
                     /gene="NFU1"
                     /coded_by="XM_061155140.1:70..831"
                     /db_xref="GeneID:133064713"
ORIGIN      
        1 maaaarlgrg aaaaaaglrr rfchvtnpyt ikkqllhqfv qrplfplpat scntvrymfi
       61 qtqdtpnpns lkfipgkpvl etrtmdfptp atafrsplar qlfriegvks vffgpdfitv
      121 tkeneeldwn llkpdiyati mdffasglpl vteetpsgea gsedddevva mikelldtri
      181 rptvqedggd viykgfedgi vqlklqgsct scpssiitlk ngiqnmlqfy ipevegveqv
      241 mddesdekea nsp
//
LOCUS       XP_061011125             688 aa            linear   MAM 02-DEC-2023
DEFINITION  glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1
            isoform X1 [Dama dama].
ACCESSION   XP_061011125
VERSION     XP_061011125.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155142.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..688
                     /product="glutamine--fructose-6-phosphate aminotransferase
                     [isomerizing] 1 isoform X1"
                     /calculated_mol_wt=77558
     Region          10..688
                     /region_name="PLN02981"
                     /note="glucosamine:fructose-6-phosphate aminotransferase"
                     /db_xref="CDD:215531"
     CDS             1..688
                     /gene="GFPT1"
                     /coded_by="XM_061155142.1:16..2082"
                     /db_xref="GeneID:133064714"
ORIGIN      
        1 mgfsrqehwg ifaylnyhvp rtrreiletl ikglqrleyr gydsagvgid ggndkdwean
       61 ackiqlikkk gkvkaldeev hkqqdmdldi efdvhlgiah trwathgepn pvnshpqrsd
      121 knnefivihn giitnykdlk kfleskgydf esetdtetia klvkymydnr esqdisfttl
      181 verviqqleg afalvfksvh fpgqavgtrr gsplligvrs ehklstdhip ilyrtgkdkk
      241 gscnlsrvds ttclfpveek aveyyfasda saviehtnrv ifledddvaa vvdgrlsihr
      301 ikrtagdhpg ravqtlqmel qqimkgnfss fmqkeifeqp esvvntmrgr vnfddytvnl
      361 gglkdhikei qrcrrlilia cgtsyhagva trqvleelte lpvmvelasd fldrntpvfr
      421 ddvcffisqs getadtlmgl ryckergalt vgitntvgss isretdcgvh inagpeigva
      481 stkaytsqfv slvmfalmmc ddrismqerr keimlglkrl pdlikevlsm ddeiqklate
      541 lyhqksvlim grgyhyatcl egalkikeit ymhsegilag elkhgplalv dklmpvimii
      601 mrdhtyakcq nalqqvvarq grpvvicdke dtetikntkr tikvphsvdc lqgilsvipl
      661 qllafhlavl rgydvdfprn laksvtve
//
LOCUS       XP_061011126             687 aa            linear   MAM 02-DEC-2023
DEFINITION  glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1
            isoform X2 [Dama dama].
ACCESSION   XP_061011126
VERSION     XP_061011126.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155143.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..687
                     /product="glutamine--fructose-6-phosphate aminotransferase
                     [isomerizing] 1 isoform X2"
                     /calculated_mol_wt=77175
     Region          9..687
                     /region_name="PLN02981"
                     /note="glucosamine:fructose-6-phosphate aminotransferase"
                     /db_xref="CDD:215531"
     CDS             1..687
                     /gene="GFPT1"
                     /coded_by="XM_061155143.1:48..2111"
                     /db_xref="GeneID:133064714"
ORIGIN      
        1 maklcgdggi faylnyhvpr trreiletli kglqrleyrg ydsagvgidg gndkdweana
       61 ckiqlikkkg kvkaldeevh kqqdmdldie fdvhlgiaht rwathgepnp vnshpqrsdk
      121 nnefivihng iitnykdlkk fleskgydfe setdtetiak lvkymydnre sqdisfttlv
      181 erviqqlega falvfksvhf pgqavgtrrg splligvrse hklstdhipi lyrtgkdkkg
      241 scnlsrvdst tclfpveeka veyyfasdas aviehtnrvi fledddvaav vdgrlsihri
      301 krtagdhpgr avqtlqmelq qimkgnfssf mqkeifeqpe svvntmrgrv nfddytvnlg
      361 glkdhikeiq rcrrliliac gtsyhagvat rqvleeltel pvmvelasdf ldrntpvfrd
      421 dvcffisqsg etadtlmglr yckergaltv gitntvgssi sretdcgvhi nagpeigvas
      481 tkaytsqfvs lvmfalmmcd drismqerrk eimlglkrlp dlikevlsmd deiqklatel
      541 yhqksvlimg rgyhyatcle galkikeity mhsegilage lkhgplalvd klmpvimiim
      601 rdhtyakcqn alqqvvarqg rpvvicdked tetikntkrt ikvphsvdcl qgilsviplq
      661 llafhlavlr gydvdfprnl aksvtve
//
LOCUS       XP_061011127             681 aa            linear   MAM 02-DEC-2023
DEFINITION  glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1
            isoform X3 [Dama dama].
ACCESSION   XP_061011127
VERSION     XP_061011127.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155144.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..681
                     /product="glutamine--fructose-6-phosphate aminotransferase
                     [isomerizing] 1 isoform X3"
                     /calculated_mol_wt=76633
     Region          1..681
                     /region_name="PLN02981"
                     /note="glucosamine:fructose-6-phosphate aminotransferase"
                     /db_xref="CDD:215531"
     CDS             1..681
                     /gene="GFPT1"
                     /coded_by="XM_061155144.1:186..2231"
                     /db_xref="GeneID:133064714"
ORIGIN      
        1 mcgifaylny hvprtrreil etlikglqrl eyrgydsagv gidggndkdw eanackiqli
       61 kkkgkvkald eevhkqqdmd ldiefdvhlg iahtrwathg epnpvnshpq rsdknnefiv
      121 ihngiitnyk dlkkfleskg ydfesetdte tiaklvkymy dnresqdisf ttlverviqq
      181 legafalvfk svhfpgqavg trrgspllig vrsehklstd hipilyrtgk dkkgscnlsr
      241 vdsttclfpv eekaveyyfa sdasavieht nrvifleddd vaavvdgrls ihrikrtagd
      301 hpgravqtlq melqqimkgn fssfmqkeif eqpesvvntm rgrvnfddyt vnlgglkdhi
      361 keiqrcrrli liacgtsyha gvatrqvlee ltelpvmvel asdfldrntp vfrddvcffi
      421 sqsgetadtl mglryckerg altvgitntv gssisretdc gvhinagpei gvastkayts
      481 qfvslvmfal mmcddrismq errkeimlgl krlpdlikev lsmddeiqkl atelyhqksv
      541 limgrgyhya tclegalkik eitymhsegi lagelkhgpl alvdklmpvi miimrdhtya
      601 kcqnalqqvv arqgrpvvic dkedtetikn tkrtikvphs vdclqgilsv iplqllafhl
      661 avlrgydvdf prnlaksvtv e
//
LOCUS       XP_061011128             656 aa            linear   MAM 02-DEC-2023
DEFINITION  glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1
            isoform X4 [Dama dama].
ACCESSION   XP_061011128
VERSION     XP_061011128.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155145.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..656
                     /product="glutamine--fructose-6-phosphate aminotransferase
                     [isomerizing] 1 isoform X4"
                     /calculated_mol_wt=73802
     Region          10..656
                     /region_name="PLN02981"
                     /note="glucosamine:fructose-6-phosphate aminotransferase"
                     /db_xref="CDD:215531"
     CDS             1..656
                     /gene="GFPT1"
                     /coded_by="XM_061155145.1:16..1986"
                     /db_xref="GeneID:133064714"
ORIGIN      
        1 mgfsrqehwg ifaylnyhvp rtrreiletl ikglqrleyr gydsagvgid ggndkdwean
       61 ackiqlikkk gkvkaldeev hkqqdmdldi efdvhlgiah trwathgepn pvnshpqrsd
      121 knnefivihn giitnykdlk kfleskgydf esetdtetia klvkymydnr esqdisfttl
      181 verviqqleg afalvfksvh fpgqavgtrr gsplligvrs ehklstdhip ilyrtgkdkk
      241 gscnlsrvds ttclfpveek aveyyfasda saviehtnrv ifledddvaa vvdgrlsihr
      301 ikrtagdhpg ravqtlqmel qqimkvnlgg lkdhikeiqr crrliliacg tsyhagvatr
      361 qvleeltelp vmvelasdfl drntpvfrdd vcffisqsge tadtlmglry ckergaltvg
      421 itntvgssis retdcgvhin agpeigvast kaytsqfvsl vmfalmmcdd rismqerrke
      481 imlglkrlpd likevlsmdd eiqklately hqksvlimgr gyhyatcleg alkikeitym
      541 hsegilagel khgplalvdk lmpvimiimr dhtyakcqna lqqvvarqgr pvvicdkedt
      601 etikntkrti kvphsvdclq gilsviplql lafhlavlrg ydvdfprnla ksvtve
//
LOCUS       XP_061011129             603 aa            linear   MAM 02-DEC-2023
DEFINITION  glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1
            isoform X5 [Dama dama].
ACCESSION   XP_061011129
VERSION     XP_061011129.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155146.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..603
                     /product="glutamine--fructose-6-phosphate aminotransferase
                     [isomerizing] 1 isoform X5"
                     /calculated_mol_wt=67715
     Region          1..603
                     /region_name="PLN02981"
                     /note="glucosamine:fructose-6-phosphate aminotransferase"
                     /db_xref="CDD:215531"
     CDS             1..603
                     /gene="GFPT1"
                     /coded_by="XM_061155146.1:125..1936"
                     /db_xref="GeneID:133064714"
ORIGIN      
        1 mdldiefdvh lgiahtrwat hgepnpvnsh pqrsdknnef ivihngiitn ykdlkkfles
       61 kgydfesetd tetiaklvky mydnresqdi sfttlvervi qqlegafalv fksvhfpgqa
      121 vgtrrgspll igvrsehkls tdhipilyrt gkdkkgscnl srvdsttclf pveekaveyy
      181 fasdasavie htnrvifled ddvaavvdgr lsihrikrta gdhpgravqt lqmelqqimk
      241 gnfssfmqke ifeqpesvvn tmrgrvnfdd ytvnlgglkd hikeiqrcrr liliacgtsy
      301 hagvatrqvl eeltelpvmv elasdfldrn tpvfrddvcf fisqsgetad tlmglrycke
      361 rgaltvgitn tvgssisret dcgvhinagp eigvastkay tsqfvslvmf almmcddris
      421 mqerrkeiml glkrlpdlik evlsmddeiq klatelyhqk svlimgrgyh yatclegalk
      481 ikeitymhse gilagelkhg plalvdklmp vimiimrdht yakcqnalqq vvarqgrpvv
      541 icdkedteti kntkrtikvp hsvdclqgil sviplqllaf hlavlrgydv dfprnlaksv
      601 tve
//
LOCUS       XP_061011130             564 aa            linear   MAM 02-DEC-2023
DEFINITION  anthrax toxin receptor 1 isoform X1 [Dama dama].
ACCESSION   XP_061011130
VERSION     XP_061011130.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155147.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..564
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..564
                     /product="anthrax toxin receptor 1 isoform X1"
                     /calculated_mol_wt=62521
     Region          39..223
                     /region_name="vWA_ATR"
                     /note="ATR (Anthrax Toxin Receptor): Anthrax toxin is a
                     key virulence factor for Bacillus anthracis, the causative
                     agent of anthrax. ATR is the cellular receptor for the
                     anthrax protective antigen and facilitates entry of the
                     toxin into cells. The VWA domain in...; cd01474"
                     /db_xref="CDD:238751"
     Site            order(50,52,54,118,150)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238751"
     Region          218..319
                     /region_name="Anth_Ig"
                     /note="Anthrax receptor extracellular domain; pfam05587"
                     /db_xref="CDD:461684"
     Region          396..488
                     /region_name="Ant_C"
                     /note="Anthrax receptor C-terminus region; pfam05586"
                     /db_xref="CDD:461683"
     CDS             1..564
                     /gene="ANTXR1"
                     /coded_by="XM_061155147.1:212..1906"
                     /db_xref="GeneID:133064715"
ORIGIN      
        1 matveqkalg igfkclslat fvlicagqgg rreeggpacy ggfdlyfild ksgsvlhhwn
       61 eiyyfveqla hkfispqlrm sfivfstqgt tlmkltedre qirqgleelq kvlpggdtym
      121 hegferaseq iyyensqgyr tasviialtd gelhedlffy sereanrsrd lgaivycvgv
      181 kdfnetqlar iadskdhvfp vndgfqalqg iihsilkksc ieilaaepst icagesfqvv
      241 vrgngfrhar nvdrvlcsfk inesvtlnek pftvedtyll cpapilkevg mkaalqvsmn
      301 dglsfisssv iittthcsdg silaiallil flllalallw wfwplcctvi ikevppppae
      361 eseeedddgl pkkkwptvda syyggrgvgg ikrmevrwge kgsteegakl ekaknarvkm
      421 peqeyefpep rnlnnnmrrp ssprkwyspi kgkldalwvl lrkgydrvsv mrpqpgdtgr
      481 cinftrvknn ppakyplnna yhttspppap iytppppaph cpppppsapt ppipsppsil
      541 ppppqapppn rapppsrppp rpsv
//
LOCUS       XP_061011131             324 aa            linear   MAM 02-DEC-2023
DEFINITION  anthrax toxin receptor 1 isoform X2 [Dama dama].
ACCESSION   XP_061011131
VERSION     XP_061011131.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155148.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..324
                     /product="anthrax toxin receptor 1 isoform X2"
                     /calculated_mol_wt=35924
     Region          39..223
                     /region_name="vWA_ATR"
                     /note="ATR (Anthrax Toxin Receptor): Anthrax toxin is a
                     key virulence factor for Bacillus anthracis, the causative
                     agent of anthrax. ATR is the cellular receptor for the
                     anthrax protective antigen and facilitates entry of the
                     toxin into cells. The VWA domain in...; cd01474"
                     /db_xref="CDD:238751"
     Site            order(50,52,54,118,150)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238751"
     Region          218..318
                     /region_name="Anth_Ig"
                     /note="Anthrax receptor extracellular domain; pfam05587"
                     /db_xref="CDD:461684"
     CDS             1..324
                     /gene="ANTXR1"
                     /coded_by="XM_061155148.1:212..1186"
                     /db_xref="GeneID:133064715"
ORIGIN      
        1 matveqkalg igfkclslat fvlicagqgg rreeggpacy ggfdlyfild ksgsvlhhwn
       61 eiyyfveqla hkfispqlrm sfivfstqgt tlmkltedre qirqgleelq kvlpggdtym
      121 hegferaseq iyyensqgyr tasviialtd gelhedlffy sereanrsrd lgaivycvgv
      181 kdfnetqlar iadskdhvfp vndgfqalqg iihsilkksc ieilaaepst icagesfqvv
      241 vrgngfrhar nvdrvlcsfk inesvtlnek pftvedtyll cpapilkevg mkaalqvsmn
      301 dglsfisssv iittthcvaa rygi
//
LOCUS       XP_061011132             643 aa            linear   MAM 02-DEC-2023
DEFINITION  rho GTPase-activating protein 25 isoform X1 [Dama dama].
ACCESSION   XP_061011132
VERSION     XP_061011132.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155149.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..643
                     /product="rho GTPase-activating protein 25 isoform X1"
                     /calculated_mol_wt=72551
     Region          48..160
                     /region_name="PH_RhoGap25-like"
                     /note="Rho GTPase activating protein 25 and related
                     proteins Pleckstrin homology (PH) domain; cd13263"
                     /db_xref="CDD:270083"
     Region          159..357
                     /region_name="RhoGAP_ARHGAP22_24_25"
                     /note="GTPase-activator protein (GAP) domain for Rho-like
                     GTPases found in ARHGAP22, 24 and 25-like proteins; longer
                     isoforms of these proteins contain an additional
                     N-terminal pleckstrin homology (PH) domain. ARHGAP25
                     (KIA0053) has been identified as a GAP for...; cd04390"
                     /db_xref="CDD:239855"
     Site            order(203,240,244,315,318..319,343)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239855"
     Site            203
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239855"
     Region          <353..>631
                     /region_name="BMS1"
                     /note="GTP-binding protein required for 40S ribosome
                     biogenesis [Translation, ribosomal structure and
                     biogenesis]; COG5192"
                     /db_xref="CDD:227519"
     Region          <525..>631
                     /region_name="Mplasa_alph_rch"
                     /note="helix-rich Mycoplasma protein; TIGR04523"
                     /db_xref="CDD:275316"
     CDS             1..643
                     /gene="ARHGAP25"
                     /coded_by="XM_061155149.1:89..2020"
                     /db_xref="GeneID:133064717"
ORIGIN      
        1 mellgvwdlg ylawtkatdl tkharsrsvm tgeqmaafhp astpnplerp ikmgwlkkqr
       61 sivknwqqry fvlraqqlyy ykdeedvkpq gcmylpgsti keiatnpeea gkfvfevipa
      121 scdqsrtgqd syvlmassqa emeewvkflr rvsgtpsgav fgqrldetva yeqkfgphlv
      181 pilvekcaef ilehglneeg ifrlpgqdnl vkqlrdafda gerpsferdt dvhtvasllk
      241 lylrdlpepv vpwsqydgfl lcgqlmnsde akaqqelikq lsilprdnys llsyicrflh
      301 eiqlncgvnk msvdnlatvi gvnlirskve dpavimrgtp qiqrvmtmmi rdhevlfpks
      361 kdaplsppas qndpkkppva rssvgwdate dppisrtdsa sdsdatsptg qqpndgcled
      421 kasrdkpgdw klqsrkrtqt lpnrkcflts alqganscka eifknefwss sleakagdgh
      481 rrtmsqgvpq ffdsqrtsty dnvptqpgsp gdeastlspq acdskrdala slnsetgpgr
      541 kisgeeeles lqkmvqelrk eietqkqmye eqienleken ydvwakvvrl neelenekkk
      601 saaleislrn versredvek rnkaleeevk efvrsmkepk tda
//
LOCUS       XP_061011133             604 aa            linear   MAM 02-DEC-2023
DEFINITION  rho GTPase-activating protein 25 isoform X2 [Dama dama].
ACCESSION   XP_061011133
VERSION     XP_061011133.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155150.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..604
                     /product="rho GTPase-activating protein 25 isoform X2"
                     /calculated_mol_wt=68274
     Region          48..>125
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          120..318
                     /region_name="RhoGAP_ARHGAP22_24_25"
                     /note="GTPase-activator protein (GAP) domain for Rho-like
                     GTPases found in ARHGAP22, 24 and 25-like proteins; longer
                     isoforms of these proteins contain an additional
                     N-terminal pleckstrin homology (PH) domain. ARHGAP25
                     (KIA0053) has been identified as a GAP for...; cd04390"
                     /db_xref="CDD:239855"
     Site            order(164,201,205,276,279..280,304)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239855"
     Site            164
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239855"
     Region          <314..>592
                     /region_name="BMS1"
                     /note="GTP-binding protein required for 40S ribosome
                     biogenesis [Translation, ribosomal structure and
                     biogenesis]; COG5192"
                     /db_xref="CDD:227519"
     Region          <506..>592
                     /region_name="PRK03918"
                     /note="DNA double-strand break repair ATPase Rad50"
                     /db_xref="CDD:235175"
     CDS             1..604
                     /gene="ARHGAP25"
                     /coded_by="XM_061155150.1:89..1903"
                     /db_xref="GeneID:133064717"
ORIGIN      
        1 mellgvwdlg ylawtkatdl tkharsrsvm tgeqmaafhp astpnplerp ikmgwlkkqr
       61 sivknwqqry fvlraqqlyy ykdeedvkpq gcmylpgsti keiatnpeea gkfvfevipa
      121 vfgqrldetv ayeqkfgphl vpilvekcae filehglnee gifrlpgqdn lvkqlrdafd
      181 agerpsferd tdvhtvasll klylrdlpep vvpwsqydgf llcgqlmnsd eakaqqelik
      241 qlsilprdny sllsyicrfl heiqlncgvn kmsvdnlatv igvnlirskv edpavimrgt
      301 pqiqrvmtmm irdhevlfpk skdaplsppa sqndpkkppv arssvgwdat edppisrtds
      361 asdsdatspt gqqpndgcle dkasrdkpgd wklqsrkrtq tlpnrkcflt salqgansck
      421 aeifknefws ssleakagdg hrrtmsqgvp qffdsqrtst ydnvptqpgs pgdeastlsp
      481 qacdskrdal aslnsetgpg rkisgeeele slqkmvqelr keietqkqmy eeqienleke
      541 nydvwakvvr lneelenekk ksaaleislr nversredve krnkaleeev kefvrsmkep
      601 ktda
//
LOCUS       XP_061011134             640 aa            linear   MAM 02-DEC-2023
DEFINITION  rho GTPase-activating protein 25 isoform X3 [Dama dama].
ACCESSION   XP_061011134
VERSION     XP_061011134.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155151.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..640
                     /product="rho GTPase-activating protein 25 isoform X3"
                     /calculated_mol_wt=72235
     Region          45..157
                     /region_name="PH_RhoGap25-like"
                     /note="Rho GTPase activating protein 25 and related
                     proteins Pleckstrin homology (PH) domain; cd13263"
                     /db_xref="CDD:270083"
     Region          156..354
                     /region_name="RhoGAP_ARHGAP22_24_25"
                     /note="GTPase-activator protein (GAP) domain for Rho-like
                     GTPases found in ARHGAP22, 24 and 25-like proteins; longer
                     isoforms of these proteins contain an additional
                     N-terminal pleckstrin homology (PH) domain. ARHGAP25
                     (KIA0053) has been identified as a GAP for...; cd04390"
                     /db_xref="CDD:239855"
     Site            order(200,237,241,312,315..316,340)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239855"
     Site            200
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239855"
     Region          <350..>628
                     /region_name="BMS1"
                     /note="GTP-binding protein required for 40S ribosome
                     biogenesis [Translation, ribosomal structure and
                     biogenesis]; COG5192"
                     /db_xref="CDD:227519"
     Region          <522..>628
                     /region_name="Mplasa_alph_rch"
                     /note="helix-rich Mycoplasma protein; TIGR04523"
                     /db_xref="CDD:275316"
     CDS             1..640
                     /gene="ARHGAP25"
                     /coded_by="XM_061155151.1:372..2294"
                     /db_xref="GeneID:133064717"
ORIGIN      
        1 mslklprnwd fnlrgeagki arsrsvmtge qmaafhpast pnplerpikm gwlkkqrsiv
       61 knwqqryfvl raqqlyyykd eedvkpqgcm ylpgstikei atnpeeagkf vfevipascd
      121 qsrtgqdsyv lmassqaeme ewvkflrrvs gtpsgavfgq rldetvayeq kfgphlvpil
      181 vekcaefile hglneegifr lpgqdnlvkq lrdafdager psferdtdvh tvasllklyl
      241 rdlpepvvpw sqydgfllcg qlmnsdeaka qqelikqlsi lprdnyslls yicrflheiq
      301 lncgvnkmsv dnlatvigvn lirskvedpa vimrgtpqiq rvmtmmirdh evlfpkskda
      361 plsppasqnd pkkppvarss vgwdatedpp isrtdsasds datsptgqqp ndgcledkas
      421 rdkpgdwklq srkrtqtlpn rkcfltsalq gansckaeif knefwsssle akagdghrrt
      481 msqgvpqffd sqrtstydnv ptqpgspgde astlspqacd skrdalasln setgpgrkis
      541 geeeleslqk mvqelrkeie tqkqmyeeqi enlekenydv wakvvrlnee lenekkksaa
      601 leislrnver sredvekrnk aleeevkefv rsmkepktda
//
LOCUS       XP_061011135             427 aa            linear   MAM 02-DEC-2023
DEFINITION  prokineticin receptor 1 [Dama dama].
ACCESSION   XP_061011135
VERSION     XP_061011135.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155152.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..427
                     /product="prokineticin receptor 1"
                     /calculated_mol_wt=48504
     Region          97..387
                     /region_name="7tmA_prokineticin-R"
                     /note="prokineticin receptors, member of the class A
                     family of seven-transmembrane G protein-coupled receptors;
                     cd15204"
                     /db_xref="CDD:320332"
     Region          98..124
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320332"
     Region          131..156
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320332"
     Site            order(153,156..157,171..176,178..179,182,225,227..231,263,
                     266..268,270..272,274..275,331,334..335,337..338,341,
                     354..355,357..359,362,365..366)
                     /site_type="other"
                     /note="putative peptide ligand binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:320332"
     Region          171..201
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320332"
     Region          212..233
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320332"
     Region          263..292
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320332"
     Region          311..341
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320332"
     Region          355..380
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320332"
     CDS             1..427
                     /gene="PROKR1"
                     /coded_by="XM_061155152.1:785..2068"
                     /db_xref="GeneID:133064720"
ORIGIN      
        1 mkeklsfgrk grpqpsniap eefprvwlka stsqmeitmg vmdenatnts tnyfplldpl
       61 gaqavslpfn fsygdydmpl dededvtnsq tffaakivig malvgimlvc gignfifiaa
      121 larykklrnl tnllianlai sdflvaivcc pfemdyyvvr qlswehghvl casvnylrtv
      181 slyvstnall aiaidrylai vhplrprmky qtatglialv wvvsiliaip sayfttetvl
      241 iivksqekif cgqiwpvdqq iyyksyflfi fgiefvgpvv tmtlcyaris relwfkavpg
      301 fqteqirkrl rcrrktvlvl mciltayvlc wapfygftiv rdffptvfvk ekhyltafyv
      361 veciamsnsm intvcfvtvk nntikyfkki mllhwkasyn dskssgdldl kttgvpatee
      421 vdcirlk
//
LOCUS       XP_061011136             427 aa            linear   MAM 02-DEC-2023
DEFINITION  prokineticin receptor 1 [Dama dama].
ACCESSION   XP_061011136
VERSION     XP_061011136.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155153.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..427
                     /product="prokineticin receptor 1"
                     /calculated_mol_wt=48504
     Region          97..387
                     /region_name="7tmA_prokineticin-R"
                     /note="prokineticin receptors, member of the class A
                     family of seven-transmembrane G protein-coupled receptors;
                     cd15204"
                     /db_xref="CDD:320332"
     Region          98..124
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320332"
     Region          131..156
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320332"
     Site            order(153,156..157,171..176,178..179,182,225,227..231,263,
                     266..268,270..272,274..275,331,334..335,337..338,341,
                     354..355,357..359,362,365..366)
                     /site_type="other"
                     /note="putative peptide ligand binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:320332"
     Region          171..201
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320332"
     Region          212..233
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320332"
     Region          263..292
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320332"
     Region          311..341
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320332"
     Region          355..380
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320332"
     CDS             1..427
                     /gene="PROKR1"
                     /coded_by="XM_061155153.1:177..1460"
                     /db_xref="GeneID:133064720"
ORIGIN      
        1 mkeklsfgrk grpqpsniap eefprvwlka stsqmeitmg vmdenatnts tnyfplldpl
       61 gaqavslpfn fsygdydmpl dededvtnsq tffaakivig malvgimlvc gignfifiaa
      121 larykklrnl tnllianlai sdflvaivcc pfemdyyvvr qlswehghvl casvnylrtv
      181 slyvstnall aiaidrylai vhplrprmky qtatglialv wvvsiliaip sayfttetvl
      241 iivksqekif cgqiwpvdqq iyyksyflfi fgiefvgpvv tmtlcyaris relwfkavpg
      301 fqteqirkrl rcrrktvlvl mciltayvlc wapfygftiv rdffptvfvk ekhyltafyv
      361 veciamsnsm intvcfvtvk nntikyfkki mllhwkasyn dskssgdldl kttgvpatee
      421 vdcirlk
//
LOCUS       XP_061011137             497 aa            linear   MAM 02-DEC-2023
DEFINITION  aprataxin and PNK-like factor isoform X1 [Dama dama].
ACCESSION   XP_061011137
VERSION     XP_061011137.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155154.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..497
                     /product="aprataxin and PNK-like factor isoform X1"
                     /calculated_mol_wt=55217
     Region          4..101
                     /region_name="FHA_APLF"
                     /note="forkhead associated (FHA) domain found in aprataxin
                     and PNK-like factor (APLF) and similar proteins; cd22717"
                     /db_xref="CDD:438769"
     Site            order(27..29,33..34,36..40,58..60)
                     /site_type="other"
                     /note="phosphopeptide binding site [polypeptide binding]"
                     /db_xref="CDD:438769"
     Region          404..426
                     /region_name="zf-CCHH"
                     /note="PBZ domain; pfam10283"
                     /db_xref="CDD:463043"
     CDS             1..497
                     /gene="APLF"
                     /coded_by="XM_061155154.1:182..1675"
                     /db_xref="GeneID:133064721"
ORIGIN      
        1 msggfelqpq dggprvalap getvigrgpl lgitdkrvsr rhailevvgg klrikplhtn
       61 pcfyqsseks qllplktnmw cwlnpgdhfs flvdkyifcv lsthsememd ctlrnsqmld
      121 eddilnetpk sssvdlpdkt psapqlggie taktqttann asfigesrdl sqqqpnpsqr
      181 krilpawmlt enssdqnlsv isednnvtre sekervckek tqvnitqqgk krlissgsse
      241 stsaeedtgk kcknddqees iisskempqs fsaatlhnte vnntntnpqr skipvealgk
      301 vsehkiitkg ssnkdsmars csescsstqs ksfcdepqks hpesssnlps pecvqkatds
      361 vshgseenkv qrtscmygan cyshpgdsdy ggvnitcqde addrpecpyg ascyrknpqh
      421 kieyrhstfp vrsisdedds vgqpneynln dsfiddeeeg yeptdedsdw epekedleke
      481 dmegllkeak kfmkrkk
//
LOCUS       XP_061011138             484 aa            linear   MAM 02-DEC-2023
DEFINITION  aprataxin and PNK-like factor isoform X2 [Dama dama].
ACCESSION   XP_061011138
VERSION     XP_061011138.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155155.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..484
                     /product="aprataxin and PNK-like factor isoform X2"
                     /calculated_mol_wt=54456
     Region          <9..78
                     /region_name="FHA"
                     /note="forkhead associated (FHA) domain superfamily;
                     cl00062"
                     /db_xref="CDD:469597"
     Region          349..373
                     /region_name="zf-CCHH"
                     /note="PBZ domain; pfam10283"
                     /db_xref="CDD:463043"
     Region          391..413
                     /region_name="zf-CCHH"
                     /note="PBZ domain; pfam10283"
                     /db_xref="CDD:463043"
     CDS             1..484
                     /gene="APLF"
                     /coded_by="XM_061155155.1:189..1643"
                     /db_xref="GeneID:133064721"
ORIGIN      
        1 mnkhtytcki tdkrvsrrha ilevvggklr ikplhtnpcf yqsseksqll plktnmwcwl
       61 npgdhfsflv dkyifcvlst hsememdctl rnsqmldedd ilnetpksss vdlpdktpsa
      121 pqlggietak tqttannasf igesrdlsqq qpnpsqrkri lpawmltens sdqnlsvise
      181 dnnvtresek ervckektqv nitqqgkkrl issgssests aeedtgkkck nddqeesiis
      241 skempqsfsa atlhntevnn tntnpqrski pvealgkvse hkiitkgssn kdsmarscse
      301 scsstqsksf cdepqkshpe sssnlpspec vqkatdsvsh gseenkvqrt scmygancyr
      361 knpvhfqhfs hpgdsdyggv nitcqdeadd rpecpygasc yrknpqhkie yrhstfpvrs
      421 isdeddsvgq pneynlndsf iddeeegyep tdedsdwepe kedlekedme gllkeakkfm
      481 krkk
//
LOCUS       XP_061011139             446 aa            linear   MAM 02-DEC-2023
DEFINITION  aprataxin and PNK-like factor isoform X3 [Dama dama].
ACCESSION   XP_061011139
VERSION     XP_061011139.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155156.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..446
                     /product="aprataxin and PNK-like factor isoform X3"
                     /calculated_mol_wt=49179
     Region          4..101
                     /region_name="FHA_APLF"
                     /note="forkhead associated (FHA) domain found in aprataxin
                     and PNK-like factor (APLF) and similar proteins; cd22717"
                     /db_xref="CDD:438769"
     Site            order(27..29,33..34,36..40,58..60)
                     /site_type="other"
                     /note="phosphopeptide binding site [polypeptide binding]"
                     /db_xref="CDD:438769"
     Region          372..396
                     /region_name="zf-CCHH"
                     /note="PBZ domain; pfam10283"
                     /db_xref="CDD:463043"
     Region          414..436
                     /region_name="zf-CCHH"
                     /note="PBZ domain; pfam10283"
                     /db_xref="CDD:463043"
     CDS             1..446
                     /gene="APLF"
                     /coded_by="XM_061155156.1:181..1521"
                     /db_xref="GeneID:133064721"
ORIGIN      
        1 msggfelqpq dggprvalap getvigrgpl lgitdkrvsr rhailevvgg klrikplhtn
       61 pcfyqsseks qllplktnmw cwlnpgdhfs flvdkyifcv lsthsememd ctlrnsqmld
      121 eddilnetpk sssvdlpdkt psapqlggie taktqttann asfigesrdl sqqqpnpsqr
      181 krilpawmlt enssdqnlsv isednnvtre sekervckek tqvnitqqgk krlissgsse
      241 stsaeedtgk kcknddqees iisskempqs fsaatlhnte vnntntnpqr skipvealgk
      301 vsehkiitkg ssnkdsmars csescsstqs ksfcdepqks hpesssnlps pecvqkatds
      361 vshgseenkv qrtscmygan cyrknpvhfq hfshpgdsdy ggvnitcqde addrpecpyg
      421 ascyrknpqh kieyrhstfp aassdh
//
LOCUS       XP_061011140             429 aa            linear   MAM 02-DEC-2023
DEFINITION  aprataxin and PNK-like factor isoform X4 [Dama dama].
ACCESSION   XP_061011140
VERSION     XP_061011140.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155157.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..429
                     /product="aprataxin and PNK-like factor isoform X4"
                     /calculated_mol_wt=48094
     Region          <2..23
                     /region_name="FHA"
                     /note="forkhead associated (FHA) domain superfamily;
                     cl00062"
                     /db_xref="CDD:469597"
     Region          294..318
                     /region_name="zf-CCHH"
                     /note="PBZ domain; pfam10283"
                     /db_xref="CDD:463043"
     Region          336..358
                     /region_name="zf-CCHH"
                     /note="PBZ domain; pfam10283"
                     /db_xref="CDD:463043"
     CDS             1..429
                     /gene="APLF"
                     /coded_by="XM_061155157.1:158..1447"
                     /db_xref="GeneID:133064721"
ORIGIN      
        1 mwcwlnpgdh fsflvdkyif cvlsthseme mdctlrnsqm ldeddilnet pksssvdlpd
       61 ktpsapqlgg ietaktqtta nnasfigesr dlsqqqpnps qrkrilpawm ltenssdqnl
      121 svisednnvt resekervck ektqvnitqq gkkrlissgs sestsaeedt gkkcknddqe
      181 esiisskemp qsfsaatlhn tevnntntnp qrskipveal gkvsehkiit kgssnkdsma
      241 rscsescsst qsksfcdepq kshpesssnl pspecvqkat dsvshgseen kvqrtscmyg
      301 ancyrknpvh fqhfshpgds dyggvnitcq deaddrpecp ygascyrknp qhkieyrhst
      361 fpvrsisded dsvgqpneyn lndsfiddee egyeptdeds dwepekedle kedmegllke
      421 akkfmkrkk
//
LOCUS       XP_061011141             408 aa            linear   MAM 02-DEC-2023
DEFINITION  aprataxin and PNK-like factor isoform X5 [Dama dama].
ACCESSION   XP_061011141
VERSION     XP_061011141.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155158.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..408
                     /product="aprataxin and PNK-like factor isoform X5"
                     /calculated_mol_wt=45664
     Region          273..297
                     /region_name="zf-CCHH"
                     /note="PBZ domain; pfam10283"
                     /db_xref="CDD:463043"
     Region          315..337
                     /region_name="zf-CCHH"
                     /note="PBZ domain; pfam10283"
                     /db_xref="CDD:463043"
     CDS             1..408
                     /gene="APLF"
                     /coded_by="XM_061155158.1:304..1530"
                     /db_xref="GeneID:133064721"
ORIGIN      
        1 mpflkwwvvs fesnrnsqml deddilnetp ksssvdlpdk tpsapqlggi etaktqttan
       61 nasfigesrd lsqqqpnpsq rkrilpawml tenssdqnls visednnvtr esekervcke
      121 ktqvnitqqg kkrlissgss estsaeedtg kkcknddqee siisskempq sfsaatlhnt
      181 evnntntnpq rskipvealg kvsehkiitk gssnkdsmar scsescsstq sksfcdepqk
      241 shpesssnlp specvqkatd svshgseenk vqrtscmyga ncyrknpvhf qhfshpgdsd
      301 yggvnitcqd eaddrpecpy gascyrknpq hkieyrhstf pvrsisdedd svgqpneynl
      361 ndsfiddeee gyeptdedsd wepekedlek edmegllkea kkfmkrkk
//
LOCUS       XP_061011142             408 aa            linear   MAM 02-DEC-2023
DEFINITION  aprataxin and PNK-like factor isoform X5 [Dama dama].
ACCESSION   XP_061011142
VERSION     XP_061011142.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155159.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..408
                     /product="aprataxin and PNK-like factor isoform X5"
                     /calculated_mol_wt=45664
     Region          273..297
                     /region_name="zf-CCHH"
                     /note="PBZ domain; pfam10283"
                     /db_xref="CDD:463043"
     Region          315..337
                     /region_name="zf-CCHH"
                     /note="PBZ domain; pfam10283"
                     /db_xref="CDD:463043"
     CDS             1..408
                     /gene="APLF"
                     /coded_by="XM_061155159.1:245..1471"
                     /db_xref="GeneID:133064721"
ORIGIN      
        1 mpflkwwvvs fesnrnsqml deddilnetp ksssvdlpdk tpsapqlggi etaktqttan
       61 nasfigesrd lsqqqpnpsq rkrilpawml tenssdqnls visednnvtr esekervcke
      121 ktqvnitqqg kkrlissgss estsaeedtg kkcknddqee siisskempq sfsaatlhnt
      181 evnntntnpq rskipvealg kvsehkiitk gssnkdsmar scsescsstq sksfcdepqk
      241 shpesssnlp specvqkatd svshgseenk vqrtscmyga ncyrknpvhf qhfshpgdsd
      301 yggvnitcqd eaddrpecpy gascyrknpq hkieyrhstf pvrsisdedd svgqpneynl
      361 ndsfiddeee gyeptdedsd wepekedlek edmegllkea kkfmkrkk
//
LOCUS       XP_061011143             408 aa            linear   MAM 02-DEC-2023
DEFINITION  aprataxin and PNK-like factor isoform X5 [Dama dama].
ACCESSION   XP_061011143
VERSION     XP_061011143.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155160.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..408
                     /product="aprataxin and PNK-like factor isoform X5"
                     /calculated_mol_wt=45664
     Region          273..297
                     /region_name="zf-CCHH"
                     /note="PBZ domain; pfam10283"
                     /db_xref="CDD:463043"
     Region          315..337
                     /region_name="zf-CCHH"
                     /note="PBZ domain; pfam10283"
                     /db_xref="CDD:463043"
     CDS             1..408
                     /gene="APLF"
                     /coded_by="XM_061155160.1:174..1400"
                     /db_xref="GeneID:133064721"
ORIGIN      
        1 mpflkwwvvs fesnrnsqml deddilnetp ksssvdlpdk tpsapqlggi etaktqttan
       61 nasfigesrd lsqqqpnpsq rkrilpawml tenssdqnls visednnvtr esekervcke
      121 ktqvnitqqg kkrlissgss estsaeedtg kkcknddqee siisskempq sfsaatlhnt
      181 evnntntnpq rskipvealg kvsehkiitk gssnkdsmar scsescsstq sksfcdepqk
      241 shpesssnlp specvqkatd svshgseenk vqrtscmyga ncyrknpvhf qhfshpgdsd
      301 yggvnitcqd eaddrpecpy gascyrknpq hkieyrhstf pvrsisdedd svgqpneynl
      361 ndsfiddeee gyeptdedsd wepekedlek edmegllkea kkfmkrkk
//
LOCUS       XP_061011144             408 aa            linear   MAM 02-DEC-2023
DEFINITION  aprataxin and PNK-like factor isoform X5 [Dama dama].
ACCESSION   XP_061011144
VERSION     XP_061011144.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155161.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..408
                     /product="aprataxin and PNK-like factor isoform X5"
                     /calculated_mol_wt=45664
     Region          273..297
                     /region_name="zf-CCHH"
                     /note="PBZ domain; pfam10283"
                     /db_xref="CDD:463043"
     Region          315..337
                     /region_name="zf-CCHH"
                     /note="PBZ domain; pfam10283"
                     /db_xref="CDD:463043"
     CDS             1..408
                     /gene="APLF"
                     /coded_by="XM_061155161.1:47..1273"
                     /db_xref="GeneID:133064721"
ORIGIN      
        1 mpflkwwvvs fesnrnsqml deddilnetp ksssvdlpdk tpsapqlggi etaktqttan
       61 nasfigesrd lsqqqpnpsq rkrilpawml tenssdqnls visednnvtr esekervcke
      121 ktqvnitqqg kkrlissgss estsaeedtg kkcknddqee siisskempq sfsaatlhnt
      181 evnntntnpq rskipvealg kvsehkiitk gssnkdsmar scsescsstq sksfcdepqk
      241 shpesssnlp specvqkatd svshgseenk vqrtscmyga ncyrknpvhf qhfshpgdsd
      301 yggvnitcqd eaddrpecpy gascyrknpq hkieyrhstf pvrsisdedd svgqpneynl
      361 ndsfiddeee gyeptdedsd wepekedlek edmegllkea kkfmkrkk
//
LOCUS       XP_061011145             507 aa            linear   MAM 02-DEC-2023
DEFINITION  aprataxin and PNK-like factor isoform X6 [Dama dama].
ACCESSION   XP_061011145
VERSION     XP_061011145.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155162.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..507
                     /product="aprataxin and PNK-like factor isoform X6"
                     /calculated_mol_wt=56509
     Region          4..101
                     /region_name="FHA_APLF"
                     /note="forkhead associated (FHA) domain found in aprataxin
                     and PNK-like factor (APLF) and similar proteins; cd22717"
                     /db_xref="CDD:438769"
     Site            order(27..29,33..34,36..40,58..60)
                     /site_type="other"
                     /note="phosphopeptide binding site [polypeptide binding]"
                     /db_xref="CDD:438769"
     Region          372..396
                     /region_name="zf-CCHH"
                     /note="PBZ domain; pfam10283"
                     /db_xref="CDD:463043"
     Region          414..436
                     /region_name="zf-CCHH"
                     /note="PBZ domain; pfam10283"
                     /db_xref="CDD:463043"
     CDS             1..507
                     /gene="APLF"
                     /coded_by="XM_061155162.1:180..1703"
                     /db_xref="GeneID:133064721"
ORIGIN      
        1 msggfelqpq dggprvalap getvigrgpl lgitdkrvsr rhailevvgg klrikplhtn
       61 pcfyqsseks qllplktnmw cwlnpgdhfs flvdkyifcv lsthsememd ctlrnsqmld
      121 eddilnetpk sssvdlpdkt psapqlggie taktqttann asfigesrdl sqqqpnpsqr
      181 krilpawmlt enssdqnlsv isednnvtre sekervckek tqvnitqqgk krlissgsse
      241 stsaeedtgk kcknddqees iisskempqs fsaatlhnte vnntntnpqr skipvealgk
      301 vsehkiitkg ssnkdsmars csescsstqs ksfcdepqks hpesssnlps pecvqkatds
      361 vshgseenkv qrtscmygan cyrknpvhfq hfshpgdsdy ggvnitcqde addrpecpyg
      421 ascyrknpqh kieyrhstfp vrsisdedds vgqpneynln dsfiddeeeg yeptdedsdw
      481 epekedleke dmegllkeak kfmkrkk
//
LOCUS       XP_061011146             155 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box only protein 48 [Dama dama].
ACCESSION   XP_061011146
VERSION     XP_061011146.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155163.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..155
                     /product="F-box only protein 48"
                     /calculated_mol_wt=18034
     Region          35..80
                     /region_name="F-box_FBXO48"
                     /note="F-box domain found in F-box only protein 48
                     (FBXO48) and similar proteins; cd22113"
                     /db_xref="CDD:438885"
     Site            order(38,42,45..46,49..50,54,56..57,61..63,65)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438885"
     CDS             1..155
                     /gene="FBXO48"
                     /coded_by="XM_061155163.1:433..900"
                     /db_xref="GeneID:133064723"
ORIGIN      
        1 mkknskrnha srvsdielns vdaekekkec qnnfvellpp evtfkifsql dirslcrasv
       61 tcrswnhair hsdslwkahc ltvravcqre idddlesgyp wrvillrnyq kskvkhewlt
      121 grysnicspi slpekimypm dadtwgeile aeler
//
LOCUS       XP_061011147             155 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box only protein 48 [Dama dama].
ACCESSION   XP_061011147
VERSION     XP_061011147.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155164.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..155
                     /product="F-box only protein 48"
                     /calculated_mol_wt=18034
     Region          35..80
                     /region_name="F-box_FBXO48"
                     /note="F-box domain found in F-box only protein 48
                     (FBXO48) and similar proteins; cd22113"
                     /db_xref="CDD:438885"
     Site            order(38,42,45..46,49..50,54,56..57,61..63,65)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438885"
     CDS             1..155
                     /gene="FBXO48"
                     /coded_by="XM_061155164.1:449..916"
                     /db_xref="GeneID:133064723"
ORIGIN      
        1 mkknskrnha srvsdielns vdaekekkec qnnfvellpp evtfkifsql dirslcrasv
       61 tcrswnhair hsdslwkahc ltvravcqre idddlesgyp wrvillrnyq kskvkhewlt
      121 grysnicspi slpekimypm dadtwgeile aeler
//
LOCUS       XP_061011148             155 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box only protein 48 [Dama dama].
ACCESSION   XP_061011148
VERSION     XP_061011148.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155165.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..155
                     /product="F-box only protein 48"
                     /calculated_mol_wt=18034
     Region          35..80
                     /region_name="F-box_FBXO48"
                     /note="F-box domain found in F-box only protein 48
                     (FBXO48) and similar proteins; cd22113"
                     /db_xref="CDD:438885"
     Site            order(38,42,45..46,49..50,54,56..57,61..63,65)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438885"
     CDS             1..155
                     /gene="FBXO48"
                     /coded_by="XM_061155165.1:1325..1792"
                     /db_xref="GeneID:133064723"
ORIGIN      
        1 mkknskrnha srvsdielns vdaekekkec qnnfvellpp evtfkifsql dirslcrasv
       61 tcrswnhair hsdslwkahc ltvravcqre idddlesgyp wrvillrnyq kskvkhewlt
      121 grysnicspi slpekimypm dadtwgeile aeler
//
LOCUS       XP_061011149             350 aa            linear   MAM 02-DEC-2023
DEFINITION  pleckstrin [Dama dama].
ACCESSION   XP_061011149
VERSION     XP_061011149.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155166.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..350
                     /product="pleckstrin"
                     /calculated_mol_wt=39871
     Region          3..110
                     /region_name="PH1_Pleckstrin_2"
                     /note="Pleckstrin 2 Pleckstrin homology (PH) domain,
                     repeat 1; cd13301"
                     /db_xref="CDD:270113"
     Region          125..223
                     /region_name="DEP_PLEK1"
                     /note="DEP (Dishevelled, Egl-10, and Pleckstrin) domain
                     found in pleckstrin 1-like proteins. Pleckstrin 1 plays a
                     role in cell spreading and reorganization of actin
                     cytoskeleton in platelets and leukocytes. Its activity is
                     highly regulated by phosphorylation; cd04445"
                     /db_xref="CDD:239892"
     Region          239..346
                     /region_name="PH2_Pleckstrin_2"
                     /note="Pleckstrin 2 Pleckstrin homology (PH) domain,
                     repeat 2; cd13302"
                     /db_xref="CDD:270114"
     Site            order(252,254..257,277,287,325)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:270114"
     Site            order(272,274,276,286,289,291,293..294,320)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:270114"
     CDS             1..350
                     /gene="PLEK"
                     /coded_by="XM_061155166.1:106..1158"
                     /db_xref="GeneID:133064724"
ORIGIN      
        1 mepkriregy lvkrgsmfns wkamwvvlle dgiefykkks dnspkgmipl kgsnltspcq
       61 dfgkrmfvfk itttkqqdhf fqaafleerd gwvrdikkat kcieggqkfa rkstrrsirl
      121 petidlgaly lsmkdtekgv kelnlekdkk ifnhcftgnc vidwlvsnks vrnrqeglvi
      181 assllnegyl qpagdlskna vdgtaenpfl dnpdafyyfp dsgffceens sdddvilkee
      241 frgviikqgc llkqghrrkn wkvrkfilre dpaylhyydp aggddplgai hlrgcvvtsv
      301 esnpdgkkse eenlfeiita devhyflqaa tpkeriewik aiqvasrtgk
//
LOCUS       XP_061011150             164 aa            linear   MAM 02-DEC-2023
DEFINITION  CB1 cannabinoid receptor-interacting protein 1 [Dama dama].
ACCESSION   XP_061011150
VERSION     XP_061011150.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155167.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..164
                     /product="CB1 cannabinoid receptor-interacting protein 1"
                     /calculated_mol_wt=18533
     Region          4..158
                     /region_name="CNRIP1"
                     /note="CB1 cannabinoid receptor-interacting protein 1;
                     pfam15043"
                     /db_xref="CDD:464465"
     CDS             1..164
                     /gene="CNRIP1"
                     /coded_by="XM_061155167.1:74..568"
                     /db_xref="GeneID:133064725"
ORIGIN      
        1 mgdlpglvrl sialriqpnd gpvfykvdgq rfgqnrtikl ltgssykvev kikpttlqve
       61 nisiggvvvp lelkskepdg drivytgtyd tegvaptksg erqpiqitmp ftdigtfetm
      121 wqvkfynyhk rdhcqwgspf svieyeckpn etrslmwvnk esfl
//
LOCUS       XP_061011151             170 aa            linear   MAM 02-DEC-2023
DEFINITION  calcineurin subunit B type 1 [Dama dama].
ACCESSION   XP_061011151
VERSION     XP_061011151.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155168.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..170
                     /product="calcineurin subunit B type 1"
                     /calculated_mol_wt=19169
     Region          20..157
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..170
                     /gene="PPP3R1"
                     /coded_by="XM_061155168.1:505..1017"
                     /db_xref="GeneID:133064726"
ORIGIN      
        1 mgneasyple mcshfdadei krlgkrfkkl dldnsgslsv eefmslpelq qnplvqrvid
       61 ifdtdgngev dfkefiegvs qfsvkgdkeq klrfafriyd mdkdgyisng elfqvlkmmv
      121 gnnlkdtqlq qivdktiina dkdgdgrisf eefcavvggl dihkkmvvdv
//
LOCUS       XP_061011152             252 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA-binding protein PNO1 [Dama dama].
ACCESSION   XP_061011152
VERSION     XP_061011152.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155169.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..252
                     /product="RNA-binding protein PNO1"
                     /calculated_mol_wt=27687
     Region          73..152
                     /region_name="KH-I_PNO1_rpt1"
                     /note="first type I K homology (KH) RNA-binding domain
                     found in partner of NOB1 (PNO1) and similar proteins;
                     cd22391"
                     /db_xref="CDD:411819"
     Site            order(73..74,76..77,85..86,88..89,92,96,100,102,104..112,
                     117,119,123,127..128,131,135,145,147..148,150..151)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:411819"
     Site            order(82..87,111,114)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:411819"
     Region          154..249
                     /region_name="KH-I_PNO1_rpt2"
                     /note="second type I K homology (KH) RNA-binding domain
                     found in partner of NOB1 (PNO1) and similar proteins;
                     cd22392"
                     /db_xref="CDD:411820"
     Site            order(154..159,161..162,167..170,177..178,187,189,192,
                     195..196,199..201,212,215,222,226..227,230,249)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:411820"
     Site            order(175,177..178,180..182,184..188,190..192,204,219,
                     231..234,236,238,242)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:411820"
     CDS             1..252
                     /gene="PNO1"
                     /coded_by="XM_061155169.1:88..846"
                     /db_xref="GeneID:133064727"
ORIGIN      
        1 meavmeaqsp laedgfsqvt rkggrrakkr qagqpstlee ggdatsmdte earpakrpvf
       61 pplsgdgfls gkeetrkipv panrytplke nwlkiftpiv ehlglqirfn lksrnveirt
      121 cketkdvsal tkaadfvkaf ilgfqvedal alirlddlfl esfeitdvkp lkgdhlsrai
      181 griagkggkt kftienvtrt rivladvkvh ilgsfqnikm artaicnlil gnppskvygn
      241 iravasraad rf
//
LOCUS       XP_061011153             357 aa            linear   MAM 02-DEC-2023
DEFINITION  dynein axonemal assembly factor 10 [Dama dama].
ACCESSION   XP_061011153
VERSION     XP_061011153.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155170.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..357
                     /product="dynein axonemal assembly factor 10"
                     /calculated_mol_wt=39696
     Region          21..348
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          21..64
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Site            order(35,43,49..50,62..63,85,89,95..96,109..110,133,138,
                     144..145,163,184,189,195..196,207..208,229,233,239..240,
                     257..258,276,281,287..288,319..320,338,343)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          69..109
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          114..157
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          168..207
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          212..256
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          262..318
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          324..348
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..357
                     /gene="DNAAF10"
                     /coded_by="XM_061155170.1:117..1190"
                     /db_xref="GeneID:133064728"
ORIGIN      
        1 msafekpqii shiqkglnyt vfdckwmpcs akfvtmgnfa rgtgviqlye iqqgdlkllr
       61 eiekakpikc gtfgatslqq rylatgdfag nlhiwnleap evpvysvkgh keiintidgv
      121 gglgigegap eivtgsrdgt vkvwdprqkd dpvanmepvq genkrdcwtv afgnaynqee
      181 rvvcagydng diklfdlrnm slrwetnikn gvcslefdrk dismnklvat slegkfhvfd
      241 mrtqhptkgf asvsekahks tvwqvrhlpq nrevfltagg agslhlwkye ypiqrskkds
      301 egvemgvags vsllqnvtls tqpissldws pdkrglcics sfdqtvrvli vtklhri
//
LOCUS       XP_061011154             153 aa            linear   MAM 02-DEC-2023
DEFINITION  nuclear nucleic acid-binding protein C1D isoform X1 [Dama dama].
ACCESSION   XP_061011154
VERSION     XP_061011154.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155171.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..153
                     /product="nuclear nucleic acid-binding protein C1D isoform
                     X1"
                     /calculated_mol_wt=17158
     Region          39..108
                     /region_name="Sas10_Utp3"
                     /note="Sas10/Utp3/C1D family; pfam04000"
                     /db_xref="CDD:461123"
     CDS             1..153
                     /gene="C1D"
                     /coded_by="XM_061155171.1:1163..1624"
                     /db_xref="GeneID:133064729"
ORIGIN      
        1 mdgsllfskl ivmagegine dypveiheyl safensigav demlktmmsv srnellqkld
       61 pleqakvdlv saytlnsmfw vylatqgvnp kehpvkqele rirvymnrvk eitdkkkagk
      121 ldrgaasrfv knalwepkpk naskvankgk skn
//
LOCUS       XP_061011155             141 aa            linear   MAM 02-DEC-2023
DEFINITION  nuclear nucleic acid-binding protein C1D isoform X2 [Dama dama].
ACCESSION   XP_061011155
VERSION     XP_061011155.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155172.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..141
                     /product="nuclear nucleic acid-binding protein C1D isoform
                     X2"
                     /calculated_mol_wt=15853
     Region          27..96
                     /region_name="Sas10_Utp3"
                     /note="Sas10/Utp3/C1D family; pfam04000"
                     /db_xref="CDD:461123"
     CDS             1..141
                     /gene="C1D"
                     /coded_by="XM_061155172.1:233..658"
                     /db_xref="GeneID:133064729"
ORIGIN      
        1 mageginedy pveiheylsa fensigavde mlktmmsvsr nellqkldpl eqakvdlvsa
       61 ytlnsmfwvy latqgvnpke hpvkqeleri rvymnrvkei tdkkkagkld rgaasrfvkn
      121 alwepkpkna skvankgksk n
//
LOCUS       XP_061011156             141 aa            linear   MAM 02-DEC-2023
DEFINITION  nuclear nucleic acid-binding protein C1D isoform X2 [Dama dama].
ACCESSION   XP_061011156
VERSION     XP_061011156.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155173.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..141
                     /product="nuclear nucleic acid-binding protein C1D isoform
                     X2"
                     /calculated_mol_wt=15853
     Region          27..96
                     /region_name="Sas10_Utp3"
                     /note="Sas10/Utp3/C1D family; pfam04000"
                     /db_xref="CDD:461123"
     CDS             1..141
                     /gene="C1D"
                     /coded_by="XM_061155173.1:181..606"
                     /db_xref="GeneID:133064729"
ORIGIN      
        1 mageginedy pveiheylsa fensigavde mlktmmsvsr nellqkldpl eqakvdlvsa
       61 ytlnsmfwvy latqgvnpke hpvkqeleri rvymnrvkei tdkkkagkld rgaasrfvkn
      121 alwepkpkna skvankgksk n
//
LOCUS       XP_061011157             141 aa            linear   MAM 02-DEC-2023
DEFINITION  nuclear nucleic acid-binding protein C1D isoform X2 [Dama dama].
ACCESSION   XP_061011157
VERSION     XP_061011157.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155174.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..141
                     /product="nuclear nucleic acid-binding protein C1D isoform
                     X2"
                     /calculated_mol_wt=15853
     Region          27..96
                     /region_name="Sas10_Utp3"
                     /note="Sas10/Utp3/C1D family; pfam04000"
                     /db_xref="CDD:461123"
     CDS             1..141
                     /gene="C1D"
                     /coded_by="XM_061155174.1:84..509"
                     /db_xref="GeneID:133064729"
ORIGIN      
        1 mageginedy pveiheylsa fensigavde mlktmmsvsr nellqkldpl eqakvdlvsa
       61 ytlnsmfwvy latqgvnpke hpvkqeleri rvymnrvkei tdkkkagkld rgaasrfvkn
      121 alwepkpkna skvankgksk n
//
LOCUS       XP_061011158             902 aa            linear   MAM 02-DEC-2023
DEFINITION  ewing's tumor-associated antigen 1 [Dama dama].
ACCESSION   XP_061011158
VERSION     XP_061011158.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155175.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..902
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..902
                     /product="ewing's tumor-associated antigen 1"
                     /calculated_mol_wt=100130
     Region          77..889
                     /region_name="ETAA1"
                     /note="Ewing's tumour-associated antigen 1 homolog;
                     pfam15350"
                     /db_xref="CDD:464665"
     CDS             1..902
                     /gene="ETAA1"
                     /coded_by="XM_061155175.1:118..2826"
                     /db_xref="GeneID:133064731"
ORIGIN      
        1 msrrrkhgds pglkqmprkg mateecrsvv esgkrrlraa rgsgpqgpge rpprplpqqe
       61 qppvaascsk snpeeryetp krmlqmdils safsspndpd gqndifwdqn spmtkqlgkg
      121 rkkqlyttds deishivnri apqdekpttd smlgmwigds aipctpsvak gksraklsct
      181 klksqnqeee lmklakqfdk nmeeldviqe qdkrnhdliq miseaetshn yrdgiqmqll
      241 cdivpeidka iikkpvkent kisvvndqts sqkpfdqnae aafiamfdgs tqkcsgqlsq
      301 hlsdaflkts nttfgkkntl keekiitnet vvtenlpskt lgslshqvdn pgmtksyvtf
      361 ctkepgtfnk hidtfttsdf eddwekllsn epfvmqniem selfpapetv qiadqkeics
      421 fnskegksks gvntsldakl rdskilqglp sntwnseltd aekyrfspkp ndkpnklsat
      481 gnkmkleksl nivdqdkiqd cavasnltkv nenthtkfns kvnasekksa lkpgcsnksi
      541 fnqslkvpan vqpfssatlg nttsvwspnq tngsklgsff ddwndpsfts eivkacyqle
      601 ssweaddvdd dilyqacddi erltqeqdir vdsktsesvl ginnsskhga knvfttpkqg
      661 sqlmqselln lnsisaqtss ltnslqlnks lkmergemyg nspgflgatt nlsiysknsd
      721 cqisnlhvsw nntdvpkqvn ssksvltess glnvsshhms teiaaskkrl stlhlsssti
      781 tgeaqrnfnr aarlskyvfe rmkncpmlsp ynnssvtrst sdtsitqgle knkavnplpg
      841 kavqqqssvk fseplrqpsk eeeeknrkcs peeiqrkrqa alvrrmakvq assvkkdssh
      901 lt
//
LOCUS       XP_061011159             465 aa            linear   MAM 02-DEC-2023
DEFINITION  homeobox protein Meis1 isoform X1 [Dama dama].
ACCESSION   XP_061011159
VERSION     XP_061011159.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155176.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..465
                     /product="homeobox protein Meis1 isoform X1"
                     /calculated_mol_wt=50672
     Region          108..192
                     /region_name="Meis_PKNOX_N"
                     /note="N-terminal of Homeobox Meis and PKNOX1; pfam16493"
                     /db_xref="CDD:465140"
     Site            order(278,321,324..325,328)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     Region          291..329
                     /region_name="Homeobox_KN"
                     /note="Homeobox KN domain; pfam05920"
                     /db_xref="CDD:428673"
     Region          <301..445
                     /region_name="Cytadhesin_P30"
                     /note="Cytadhesin P30/P32; pfam07271"
                     /db_xref="CDD:429374"
     CDS             1..465
                     /gene="MEIS1"
                     /coded_by="XM_061155176.1:714..2111"
                     /db_xref="GeneID:133064734"
ORIGIN      
        1 maqryddlph yggmdgvgip stmygdphaa rsmqpvhhln hgpplhshqy phtahtnama
       61 psmgssvnda lkrdkdaiyg hplfpllali fekcelatct prepgvaggd vcssesfned
      121 iavfakqira ekplfssnpe ldnlmiqaiq vlrfhllele kvhelcdnfc hryisclkgk
      181 mpidlviddr eggsksdsed itrsanltdq pswnrdhddt astrsggtpg pssgghtshs
      241 gdnsseqgdg ldnsvaspst gddddpdkdk krhkkrgifp kvatnimraw lfqhlthpyp
      301 seeqkkqlaq dtgltilqvn nwfinarrri vqpmidqsnr avsqgtpynp dgqpmggfvm
      361 dgqqhmgira pglqsmpgey varggpmgvs mgqpsytqpq mpphpaqlrh gppmhtyipg
      421 hphhptvmmh ggpphpgmpm sassptvlnt gdptmsgqvm dihaq
//
LOCUS       XP_061011160             390 aa            linear   MAM 02-DEC-2023
DEFINITION  homeobox protein Meis1 isoform X2 [Dama dama].
ACCESSION   XP_061011160
VERSION     XP_061011160.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155177.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..390
                     /product="homeobox protein Meis1 isoform X2"
                     /calculated_mol_wt=42885
     Region          108..192
                     /region_name="Meis_PKNOX_N"
                     /note="N-terminal of Homeobox Meis and PKNOX1; pfam16493"
                     /db_xref="CDD:465140"
     Site            order(278,321,324..325,328)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     Region          291..329
                     /region_name="Homeobox_KN"
                     /note="Homeobox KN domain; pfam05920"
                     /db_xref="CDD:428673"
     CDS             1..390
                     /gene="MEIS1"
                     /coded_by="XM_061155177.1:714..1886"
                     /db_xref="GeneID:133064734"
ORIGIN      
        1 maqryddlph yggmdgvgip stmygdphaa rsmqpvhhln hgpplhshqy phtahtnama
       61 psmgssvnda lkrdkdaiyg hplfpllali fekcelatct prepgvaggd vcssesfned
      121 iavfakqira ekplfssnpe ldnlmiqaiq vlrfhllele kvhelcdnfc hryisclkgk
      181 mpidlviddr eggsksdsed itrsanltdq pswnrdhddt astrsggtpg pssgghtshs
      241 gdnsseqgdg ldnsvaspst gddddpdkdk krhkkrgifp kvatnimraw lfqhlthpyp
      301 seeqkkqlaq dtgltilqvn nwfinarrri vqpmidqsnr avsqgtpynp dgqpmggfvm
      361 dgqqhmgira pgpmsgmgmn mgmegqwhym
//
LOCUS       XP_061011161             417 aa            linear   MAM 02-DEC-2023
DEFINITION  sprouty-related, EVH1 domain-containing protein 2 isoform X1 [Dama
            dama].
ACCESSION   XP_061011161
VERSION     XP_061011161.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155178.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..417
                     /product="sprouty-related, EVH1 domain-containing protein
                     2 isoform X1"
                     /calculated_mol_wt=47442
     Region          12..124
                     /region_name="EVH1_SPRED-like"
                     /note="Sprouty-related EVH1 domain-containing-like
                     proteins EVH1 domain; cd10574"
                     /db_xref="CDD:269978"
     Site            order(21,30,88,90)
                     /site_type="other"
                     /note="putative proline-rich peptide binding site
                     [polypeptide binding]"
                     /db_xref="CDD:269978"
     Region          305..410
                     /region_name="Sprouty"
                     /note="Sprouty protein (Spry); pfam05210"
                     /db_xref="CDD:461589"
     CDS             1..417
                     /gene="SPRED2"
                     /coded_by="XM_061155178.1:1577..2830"
                     /db_xref="GeneID:133064735"
ORIGIN      
        1 mteethpddd syivrvkavv mtrddssggw fpqegggisr vgvckvmhpe gngrsgflih
       61 gerqkdklvv lecyvrkdlv ytkanptfhh wkvdnrkfgl tfqspadara fdrgvrkaie
      121 dliegsttss stihneaelg dddvfttatd sssnssqkre qptrtisspt scehrkvytl
      181 ghlhdpyptd hyhleqpmpr pyrqvsfpdd deeivrinpr ekiwmtgyed yrhapvrgky
      241 ldptedadsy vrfakgevpk hdynypymds sdfglgedpk grggsviktq psrgksrrrk
      301 edgersrcey crdmfnheen rrghcqdapd svrtcirrvs cmwcadsmly hcmsdpegdy
      361 tdpcscdtsd ekfclrwmal ialsflapcm ccylplracy hcgvmcrccg gkhkaav
//
LOCUS       XP_061011162             417 aa            linear   MAM 02-DEC-2023
DEFINITION  sprouty-related, EVH1 domain-containing protein 2 isoform X1 [Dama
            dama].
ACCESSION   XP_061011162
VERSION     XP_061011162.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155179.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..417
                     /product="sprouty-related, EVH1 domain-containing protein
                     2 isoform X1"
                     /calculated_mol_wt=47442
     Region          12..124
                     /region_name="EVH1_SPRED-like"
                     /note="Sprouty-related EVH1 domain-containing-like
                     proteins EVH1 domain; cd10574"
                     /db_xref="CDD:269978"
     Site            order(21,30,88,90)
                     /site_type="other"
                     /note="putative proline-rich peptide binding site
                     [polypeptide binding]"
                     /db_xref="CDD:269978"
     Region          305..410
                     /region_name="Sprouty"
                     /note="Sprouty protein (Spry); pfam05210"
                     /db_xref="CDD:461589"
     CDS             1..417
                     /gene="SPRED2"
                     /coded_by="XM_061155179.1:768..2021"
                     /db_xref="GeneID:133064735"
ORIGIN      
        1 mteethpddd syivrvkavv mtrddssggw fpqegggisr vgvckvmhpe gngrsgflih
       61 gerqkdklvv lecyvrkdlv ytkanptfhh wkvdnrkfgl tfqspadara fdrgvrkaie
      121 dliegsttss stihneaelg dddvfttatd sssnssqkre qptrtisspt scehrkvytl
      181 ghlhdpyptd hyhleqpmpr pyrqvsfpdd deeivrinpr ekiwmtgyed yrhapvrgky
      241 ldptedadsy vrfakgevpk hdynypymds sdfglgedpk grggsviktq psrgksrrrk
      301 edgersrcey crdmfnheen rrghcqdapd svrtcirrvs cmwcadsmly hcmsdpegdy
      361 tdpcscdtsd ekfclrwmal ialsflapcm ccylplracy hcgvmcrccg gkhkaav
//
LOCUS       XP_061011163             414 aa            linear   MAM 02-DEC-2023
DEFINITION  sprouty-related, EVH1 domain-containing protein 2 isoform X2 [Dama
            dama].
ACCESSION   XP_061011163
VERSION     XP_061011163.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155180.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..414
                     /product="sprouty-related, EVH1 domain-containing protein
                     2 isoform X2"
                     /calculated_mol_wt=46931
     Region          9..121
                     /region_name="EVH1_SPRED-like"
                     /note="Sprouty-related EVH1 domain-containing-like
                     proteins EVH1 domain; cd10574"
                     /db_xref="CDD:269978"
     Site            order(18,27,85,87)
                     /site_type="other"
                     /note="putative proline-rich peptide binding site
                     [polypeptide binding]"
                     /db_xref="CDD:269978"
     Region          302..407
                     /region_name="Sprouty"
                     /note="Sprouty protein (Spry); pfam05210"
                     /db_xref="CDD:461589"
     CDS             1..414
                     /gene="SPRED2"
                     /coded_by="XM_061155180.1:282..1526"
                     /db_xref="GeneID:133064735"
ORIGIN      
        1 maspasdsyi vrvkavvmtr ddssggwfpq egggisrvgv ckvmhpegng rsgflihger
       61 qkdklvvlec yvrkdlvytk anptfhhwkv dnrkfgltfq spadarafdr gvrkaiedli
      121 egsttsssti hneaelgddd vfttatdsss nssqkreqpt rtissptsce hrkvytlghl
      181 hdpyptdhyh leqpmprpyr qvsfpdddee ivrinpreki wmtgyedyrh apvrgkyldp
      241 tedadsyvrf akgevpkhdy nypymdssdf glgedpkgrg gsviktqpsr gksrrrkedg
      301 ersrceycrd mfnheenrrg hcqdapdsvr tcirrvscmw cadsmlyhcm sdpegdytdp
      361 cscdtsdekf clrwmalial sflapcmccy lplracyhcg vmcrccggkh kaav
//
LOCUS       XP_061011164             394 aa            linear   MAM 02-DEC-2023
DEFINITION  actin-related protein 2 [Dama dama].
ACCESSION   XP_061011164
VERSION     XP_061011164.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155181.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..394
                     /product="actin-related protein 2"
                     /calculated_mol_wt=44630
     Region          7..388
                     /region_name="ASKHA_NBD_Arp2"
                     /note="nucleotide-binding domain (NBD) of actin-related
                     protein2 (Arp2) and similar proteins; cd10220"
                     /db_xref="CDD:466821"
     CDS             1..394
                     /gene="ACTR2"
                     /coded_by="XM_061155181.1:117..1301"
                     /db_xref="GeneID:133064737"
ORIGIN      
        1 mdsqgrkvvv cdngtgfvkc gyagsnfpeh ifpalvgrpi irsttkvgni eikdlmvgde
       61 aselrsmlev nypmengivr nwddmkhlwd ytfgpeklni dtrnckillt eppmnptknr
      121 ekivevmfet yqfsgvyvai qavltlyaqg lltgvvvdsg dgvthicpvy egfslphltr
      181 rldiagrdit rylikllllr gyafnhsadf etvrmikekl cyvgynieqe qklalettvl
      241 vesytlpdgr iikvggerfe apealfqphl invegvgvae llfntiqaad idtrsefykh
      301 ivlsggstmy pglpsrlere lkqlylervl kgdveklskf kiriedpprr khmvflggav
      361 ladimkdkdn fwmtrqeyqe kgvrvleklg vtvr
//
LOCUS       XP_061011165             791 aa            linear   MAM 02-DEC-2023
DEFINITION  centrosomal protein of 68 kDa isoform X1 [Dama dama].
ACCESSION   XP_061011165
VERSION     XP_061011165.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155182.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..791
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..791
                     /product="centrosomal protein of 68 kDa isoform X1"
                     /calculated_mol_wt=83541
     Region          <33..543
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          624..>719
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     CDS             1..791
                     /gene="CEP68"
                     /coded_by="XM_061155182.1:171..2546"
                     /db_xref="GeneID:133064739"
ORIGIN      
        1 malgeekaeg kassdkkaps cggwsrreqe lspsgpvlge qpprleaegg paspvggteg
       61 lpspagyggv gpgssrtcqp langasrepa aggskpalsc mpppasletg dlpsagsqme
      121 etrlpvpeae alprtraipr aaalcsghda dteddpspve spqvpdlcpq spipgfpcps
      181 rwrsavspet paplsssrsv sasssgsslq ghqekaeprs gcltkvsscl elavppsaps
      241 avgpgprlqw lpqpvssagd apglgrrrls fqaeywacvl pdslppspdr rsplwnpnke
      301 yedlldytyp lrpgprlpkq ldshvlaepv pqdsgvdlds fsispastlk sptnvshscp
      361 paeaaavpfs tprepslkrg psgvpqkqgg vglascspfa stprapggra tpwvsrepar
      421 knlrdwppvg rhlelgsphl rtrdrgwpsp glerekgasq glgrlactes gwkpqeemes
      481 ddeylalptr ltqvsslvsy lgsiptsvpl stdaaegqss ldvsdsdgpa slpsdssqsq
      541 lpsratfrgs wsaedqkhrl lrsfiharrs agegslvsgq algvssgpvr traswsamld
      601 pdaegqlprk ggeqgkeslv qcvqtfccql eelihwlyhv adttdhltap rssltglkss
      661 lqlyrqfkkd idehqsltes vlqkgevllq slldntpvlk dvlgrisrqp saleshadrl
      721 ydtilasldt lagctltpns tpaahrsasv kgislvstat peekicpetq vpdsgtefcs
      781 nswlflrsfl n
//
LOCUS       XP_061011166             762 aa            linear   MAM 02-DEC-2023
DEFINITION  centrosomal protein of 68 kDa isoform X2 [Dama dama].
ACCESSION   XP_061011166
VERSION     XP_061011166.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155183.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..762
                     /product="centrosomal protein of 68 kDa isoform X2"
                     /calculated_mol_wt=80272
     Region          <33..543
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          624..>719
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     CDS             1..762
                     /gene="CEP68"
                     /coded_by="XM_061155183.1:171..2459"
                     /db_xref="GeneID:133064739"
ORIGIN      
        1 malgeekaeg kassdkkaps cggwsrreqe lspsgpvlge qpprleaegg paspvggteg
       61 lpspagyggv gpgssrtcqp langasrepa aggskpalsc mpppasletg dlpsagsqme
      121 etrlpvpeae alprtraipr aaalcsghda dteddpspve spqvpdlcpq spipgfpcps
      181 rwrsavspet paplsssrsv sasssgsslq ghqekaeprs gcltkvsscl elavppsaps
      241 avgpgprlqw lpqpvssagd apglgrrrls fqaeywacvl pdslppspdr rsplwnpnke
      301 yedlldytyp lrpgprlpkq ldshvlaepv pqdsgvdlds fsispastlk sptnvshscp
      361 paeaaavpfs tprepslkrg psgvpqkqgg vglascspfa stprapggra tpwvsrepar
      421 knlrdwppvg rhlelgsphl rtrdrgwpsp glerekgasq glgrlactes gwkpqeemes
      481 ddeylalptr ltqvsslvsy lgsiptsvpl stdaaegqss ldvsdsdgpa slpsdssqsq
      541 lpsratfrgs wsaedqkhrl lrsfiharrs agegslvsgq algvssgpvr traswsamld
      601 pdaegqlprk ggeqgkeslv qcvqtfccql eelihwlyhv adttdhltap rssltglkss
      661 lqlyrqfkkd idehqsltes vlqkgevllq slldntpvlk dvlgrisrqp saleshadrl
      721 ydtilasldt lagctltpns tpaahrsasv kgislassle em
//
LOCUS       XP_061011167             205 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-related protein Rab-1A [Dama dama].
ACCESSION   XP_061011167
VERSION     XP_061011167.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155184.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..205
                     /product="ras-related protein Rab-1A"
                     /calculated_mol_wt=22547
     Region          10..175
                     /region_name="Rab1_Ypt1"
                     /note="Rab GTPase family 1 includes the yeast homolog
                     Ypt1; cd01869"
                     /db_xref="CDD:206661"
     Site            10..13
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206661"
     Site            18..25
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206661"
     Site            order(19,21..26,36,124..125,127,154..156)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206661"
     Site            order(26..37,40..42)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206661"
     Site            order(36,41..49)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206661"
     Site            order(41,45..52,59,61)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206661"
     Site            43
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206661"
     Site            order(44,46..48,63,65,72..73,76,80,82..85,172)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206661"
     Site            order(44..45,47,65..66,73,75,77..79,82)
                     /site_type="active"
                     /note="GDI interaction site [active]"
                     /db_xref="CDD:206661"
     Site            44..48
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206661"
     Site            61..65
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206661"
     Site            66..69
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206661"
     Site            order(69,71..81)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206661"
     Site            72..77
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206661"
     Site            80..84
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206661"
     Site            89..94
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206661"
     Site            115..121
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206661"
     Site            124..127
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206661"
     Site            154..156
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206661"
     Site            170..175
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206661"
     CDS             1..205
                     /gene="RAB1A"
                     /coded_by="XM_061155184.1:216..833"
                     /db_xref="GeneID:133064740"
ORIGIN      
        1 mssmnpeydy lfkllligds gvgksclllr faddtytesy istigvdfki rtieldgkti
       61 klqiwdtagq erfrtitssy yrgahgiivv ydvtdqesfn nvkqwlqeid ryasenvnkl
      121 lvgnkcdltt kkvvdyttak efadslgipf letsaknatn veqsfmtmaa eikkrmgpga
      181 taggaeksnv kiqstpvkqs gggcc
//
LOCUS       XP_061011168             530 aa            linear   MAM 02-DEC-2023
DEFINITION  neutral amino acid transporter A [Dama dama].
ACCESSION   XP_061011168
VERSION     XP_061011168.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155185.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..530
                     /product="neutral amino acid transporter A"
                     /calculated_mol_wt=55781
     Region          40..471
                     /region_name="GltP"
                     /note="Na+/H+-dicarboxylate symporter [Energy production
                     and conversion]; COG1301"
                     /db_xref="CDD:440912"
     CDS             1..530
                     /gene="SLC1A4"
                     /coded_by="XM_061155185.1:279..1871"
                     /db_xref="GeneID:133064741"
ORIGIN      
        1 mekgsetngy ldsaqegpaa epgepgttag ragrcagflr rhglvlltvs gvvagaglga
       61 alrglklnrt qvtylafpge mllrmlrmii lplvvcslvs gaasldassl grlggiaiay
      121 fglttlgasa lavalafiik pgsgaqtlqs sdlgledsgp ppvpketvds fldltrnlfp
      181 snlvvaafrt yatdyrevth ntsagnmtie kipigteieg mnilglvlfa lvlgvalkkl
      241 gsegeelirf fnafneatmv lvswimwyvp vgimflvgsk ivemkdiiml vtslgkyift
      301 silghfihgg ivlpliyfvf trknpfrfll glltpfataf atcsssatlp smmkcieenn
      361 gvdkrisrfi lpigatvnmd gaaifqcvaa vfiaqlnnve lragqiftil vtatassvga
      421 agvpaggvlt iaiileaigl pthdlslila vdwivdrttt vvnvegdalg agilhhlnqk
      481 amkrgeqels evkveaipnc kseeetsplv thpnpagpaa stpeskesvl
//
LOCUS       XP_061011169             317 aa            linear   MAM 02-DEC-2023
DEFINITION  SERTA domain-containing protein 2 [Dama dama].
ACCESSION   XP_061011169
VERSION     XP_061011169.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155186.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..317
                     /product="SERTA domain-containing protein 2"
                     /calculated_mol_wt=33140
     Region          40..75
                     /region_name="SERTA"
                     /note="SERTA motif; pfam06031"
                     /db_xref="CDD:461806"
     CDS             1..317
                     /gene="SERTAD2"
                     /coded_by="XM_061155186.1:322..1275"
                     /db_xref="GeneID:133064742"
ORIGIN      
        1 mlgkggkrkf dehedglegk ivspsdgpsk vsytlqrqti fnislmklyn hrpltepslq
       61 ktvlinnmlr riqeelkqeg slrpafpass ppaaaaaadp lgsssreapp afsqpapaps
      121 elggaaalea cltpaslled ddpdalctss paaparlapp allppekdsf ssaldeieel
      181 cptststeat eadgpkgdss ssgpgapqrp eglqdggrpe daklmdslpg nfeitastgf
      241 ltdltlddil fadidtsmyd fdpctsasgt askmspvsad dllktlapys sqpvapsqpf
      301 kmdlteldhi mevlvgs
//
LOCUS       XP_061011170             317 aa            linear   MAM 02-DEC-2023
DEFINITION  SERTA domain-containing protein 2 [Dama dama].
ACCESSION   XP_061011170
VERSION     XP_061011170.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155187.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..317
                     /product="SERTA domain-containing protein 2"
                     /calculated_mol_wt=33140
     Region          40..75
                     /region_name="SERTA"
                     /note="SERTA motif; pfam06031"
                     /db_xref="CDD:461806"
     CDS             1..317
                     /gene="SERTAD2"
                     /coded_by="XM_061155187.1:818..1771"
                     /db_xref="GeneID:133064742"
ORIGIN      
        1 mlgkggkrkf dehedglegk ivspsdgpsk vsytlqrqti fnislmklyn hrpltepslq
       61 ktvlinnmlr riqeelkqeg slrpafpass ppaaaaaadp lgsssreapp afsqpapaps
      121 elggaaalea cltpaslled ddpdalctss paaparlapp allppekdsf ssaldeieel
      181 cptststeat eadgpkgdss ssgpgapqrp eglqdggrpe daklmdslpg nfeitastgf
      241 ltdltlddil fadidtsmyd fdpctsasgt askmspvsad dllktlapys sqpvapsqpf
      301 kmdlteldhi mevlvgs
//
LOCUS       XP_061011171             317 aa            linear   MAM 02-DEC-2023
DEFINITION  SERTA domain-containing protein 2 [Dama dama].
ACCESSION   XP_061011171
VERSION     XP_061011171.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155188.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..317
                     /product="SERTA domain-containing protein 2"
                     /calculated_mol_wt=33140
     Region          40..75
                     /region_name="SERTA"
                     /note="SERTA motif; pfam06031"
                     /db_xref="CDD:461806"
     CDS             1..317
                     /gene="SERTAD2"
                     /coded_by="XM_061155188.1:632..1585"
                     /db_xref="GeneID:133064742"
ORIGIN      
        1 mlgkggkrkf dehedglegk ivspsdgpsk vsytlqrqti fnislmklyn hrpltepslq
       61 ktvlinnmlr riqeelkqeg slrpafpass ppaaaaaadp lgsssreapp afsqpapaps
      121 elggaaalea cltpaslled ddpdalctss paaparlapp allppekdsf ssaldeieel
      181 cptststeat eadgpkgdss ssgpgapqrp eglqdggrpe daklmdslpg nfeitastgf
      241 ltdltlddil fadidtsmyd fdpctsasgt askmspvsad dllktlapys sqpvapsqpf
      301 kmdlteldhi mevlvgs
//
LOCUS       XP_061011172             938 aa            linear   MAM 02-DEC-2023
DEFINITION  aftiphilin isoform X1 [Dama dama].
ACCESSION   XP_061011172
VERSION     XP_061011172.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155189.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..938
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..938
                     /product="aftiphilin isoform X1"
                     /calculated_mol_wt=102284
     Region          699..768
                     /region_name="Clathrin_bdg"
                     /note="Clathrin-binding box of Aftiphilin, vesicle
                     trafficking; pfam15045"
                     /db_xref="CDD:464467"
     CDS             1..938
                     /gene="AFTPH"
                     /coded_by="XM_061155189.1:171..2987"
                     /db_xref="GeneID:133064745"
ORIGIN      
        1 mepdiirmys sspppldnga edddddefge fggfsevsps gvgfvdfdtp dytrpkeefv
       61 psnhfmpihd fsenvdslts fksiknsndk ditaelsspv kgqsdvllst tskeiisskt
      121 ldtsidgies pqdlnkeveq rqnvgtpesf spgdfrtdln vihqnkqles cngekppcle
      181 iltngfavle tvnpqgtddl dtvadskglk plsthsteyn ldyapspaee fadfatfskk
      241 eriqleeigc avlndealti qennkinrvn elnsikevsl nrsfddeedt arkdqvcvse
      301 isiasdrdfs rgkqglptlq qdaffnssvq seawsladpa enseasrreq ckaeenldlf
      361 tskcadlcmv stktldadde igsskeeirg ftdsqslsfd pteenvldds vsvkngdssn
      421 dfvtcndtie ddfgdfgtas gttpplvtag tqdsmsdvtf eessehfphl sepgddfgef
      481 gesnivscqe eiifaesdlk qtsdslsegc slarkptgtg iepvskleig qegefgdfds
      541 vpniqddcsa fqdsddfadf ssagpsqvvd wnafedgqkd scswaafgdq qateshhrke
      601 awqshrtdek idtpgtpkvh svslaaskga vagghlhett tsvqtallnr lerifeacfp
      661 sifvpdteee vtslkhllet stlpiktrea laesgelmdv wtelqdvhda hglryqwggs
      721 hsnkkllcsl gidirnilft gnkkqpvivp myaaglgmle ptkeplkpls aaekiasigq
      781 tttmspemnt ctsdqfqesl ppvqfdwsss gltnpldasg gstllnldff gpvddsssss
      841 sttipgvdpe lyelttskle istsslkvtd afarlmstve ktststrkpk reehlseeai
      901 kviaslpdlt fmhakvlmfp ttltpstssq ekadeqlm
//
LOCUS       XP_061011173             938 aa            linear   MAM 02-DEC-2023
DEFINITION  aftiphilin isoform X1 [Dama dama].
ACCESSION   XP_061011173
VERSION     XP_061011173.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155190.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..938
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..938
                     /product="aftiphilin isoform X1"
                     /calculated_mol_wt=102284
     Region          699..768
                     /region_name="Clathrin_bdg"
                     /note="Clathrin-binding box of Aftiphilin, vesicle
                     trafficking; pfam15045"
                     /db_xref="CDD:464467"
     CDS             1..938
                     /gene="AFTPH"
                     /coded_by="XM_061155190.1:360..3176"
                     /db_xref="GeneID:133064745"
ORIGIN      
        1 mepdiirmys sspppldnga edddddefge fggfsevsps gvgfvdfdtp dytrpkeefv
       61 psnhfmpihd fsenvdslts fksiknsndk ditaelsspv kgqsdvllst tskeiisskt
      121 ldtsidgies pqdlnkeveq rqnvgtpesf spgdfrtdln vihqnkqles cngekppcle
      181 iltngfavle tvnpqgtddl dtvadskglk plsthsteyn ldyapspaee fadfatfskk
      241 eriqleeigc avlndealti qennkinrvn elnsikevsl nrsfddeedt arkdqvcvse
      301 isiasdrdfs rgkqglptlq qdaffnssvq seawsladpa enseasrreq ckaeenldlf
      361 tskcadlcmv stktldadde igsskeeirg ftdsqslsfd pteenvldds vsvkngdssn
      421 dfvtcndtie ddfgdfgtas gttpplvtag tqdsmsdvtf eessehfphl sepgddfgef
      481 gesnivscqe eiifaesdlk qtsdslsegc slarkptgtg iepvskleig qegefgdfds
      541 vpniqddcsa fqdsddfadf ssagpsqvvd wnafedgqkd scswaafgdq qateshhrke
      601 awqshrtdek idtpgtpkvh svslaaskga vagghlhett tsvqtallnr lerifeacfp
      661 sifvpdteee vtslkhllet stlpiktrea laesgelmdv wtelqdvhda hglryqwggs
      721 hsnkkllcsl gidirnilft gnkkqpvivp myaaglgmle ptkeplkpls aaekiasigq
      781 tttmspemnt ctsdqfqesl ppvqfdwsss gltnpldasg gstllnldff gpvddsssss
      841 sttipgvdpe lyelttskle istsslkvtd afarlmstve ktststrkpk reehlseeai
      901 kviaslpdlt fmhakvlmfp ttltpstssq ekadeqlm
//
LOCUS       XP_061011174             938 aa            linear   MAM 02-DEC-2023
DEFINITION  aftiphilin isoform X1 [Dama dama].
ACCESSION   XP_061011174
VERSION     XP_061011174.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155191.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..938
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..938
                     /product="aftiphilin isoform X1"
                     /calculated_mol_wt=102284
     Region          699..768
                     /region_name="Clathrin_bdg"
                     /note="Clathrin-binding box of Aftiphilin, vesicle
                     trafficking; pfam15045"
                     /db_xref="CDD:464467"
     CDS             1..938
                     /gene="AFTPH"
                     /coded_by="XM_061155191.1:172..2988"
                     /db_xref="GeneID:133064745"
ORIGIN      
        1 mepdiirmys sspppldnga edddddefge fggfsevsps gvgfvdfdtp dytrpkeefv
       61 psnhfmpihd fsenvdslts fksiknsndk ditaelsspv kgqsdvllst tskeiisskt
      121 ldtsidgies pqdlnkeveq rqnvgtpesf spgdfrtdln vihqnkqles cngekppcle
      181 iltngfavle tvnpqgtddl dtvadskglk plsthsteyn ldyapspaee fadfatfskk
      241 eriqleeigc avlndealti qennkinrvn elnsikevsl nrsfddeedt arkdqvcvse
      301 isiasdrdfs rgkqglptlq qdaffnssvq seawsladpa enseasrreq ckaeenldlf
      361 tskcadlcmv stktldadde igsskeeirg ftdsqslsfd pteenvldds vsvkngdssn
      421 dfvtcndtie ddfgdfgtas gttpplvtag tqdsmsdvtf eessehfphl sepgddfgef
      481 gesnivscqe eiifaesdlk qtsdslsegc slarkptgtg iepvskleig qegefgdfds
      541 vpniqddcsa fqdsddfadf ssagpsqvvd wnafedgqkd scswaafgdq qateshhrke
      601 awqshrtdek idtpgtpkvh svslaaskga vagghlhett tsvqtallnr lerifeacfp
      661 sifvpdteee vtslkhllet stlpiktrea laesgelmdv wtelqdvhda hglryqwggs
      721 hsnkkllcsl gidirnilft gnkkqpvivp myaaglgmle ptkeplkpls aaekiasigq
      781 tttmspemnt ctsdqfqesl ppvqfdwsss gltnpldasg gstllnldff gpvddsssss
      841 sttipgvdpe lyelttskle istsslkvtd afarlmstve ktststrkpk reehlseeai
      901 kviaslpdlt fmhakvlmfp ttltpstssq ekadeqlm
//
LOCUS       XP_061011175             910 aa            linear   MAM 02-DEC-2023
DEFINITION  aftiphilin isoform X2 [Dama dama].
ACCESSION   XP_061011175
VERSION     XP_061011175.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155192.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..910
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..910
                     /product="aftiphilin isoform X2"
                     /calculated_mol_wt=99543
     Region          699..768
                     /region_name="Clathrin_bdg"
                     /note="Clathrin-binding box of Aftiphilin, vesicle
                     trafficking; pfam15045"
                     /db_xref="CDD:464467"
     CDS             1..910
                     /gene="AFTPH"
                     /coded_by="XM_061155192.1:248..2980"
                     /db_xref="GeneID:133064745"
ORIGIN      
        1 mepdiirmys sspppldnga edddddefge fggfsevsps gvgfvdfdtp dytrpkeefv
       61 psnhfmpihd fsenvdslts fksiknsndk ditaelsspv kgqsdvllst tskeiisskt
      121 ldtsidgies pqdlnkeveq rqnvgtpesf spgdfrtdln vihqnkqles cngekppcle
      181 iltngfavle tvnpqgtddl dtvadskglk plsthsteyn ldyapspaee fadfatfskk
      241 eriqleeigc avlndealti qennkinrvn elnsikevsl nrsfddeedt arkdqvcvse
      301 isiasdrdfs rgkqglptlq qdaffnssvq seawsladpa enseasrreq ckaeenldlf
      361 tskcadlcmv stktldadde igsskeeirg ftdsqslsfd pteenvldds vsvkngdssn
      421 dfvtcndtie ddfgdfgtas gttpplvtag tqdsmsdvtf eessehfphl sepgddfgef
      481 gesnivscqe eiifaesdlk qtsdslsegc slarkptgtg iepvskleig qegefgdfds
      541 vpniqddcsa fqdsddfadf ssagpsqvvd wnafedgqkd scswaafgdq qateshhrke
      601 awqshrtdek idtpgtpkvh svslaaskga vagghlhett tsvqtallnr lerifeacfp
      661 sifvpdteee vtslkhllet stlpiktrea laesgelmdv wtelqdvhda hglryqwggs
      721 hsnkkllcsl gidirnilft gnkkqpvivp myaaglgmle ptkeplkpls aaekiasigq
      781 tttmspemnt ctsdqfqesl ppvqfdwsss gltnpldgvd pelyelttsk leistsslkv
      841 tdafarlmst vektststrk pkreehlsee aikviaslpd ltfmhakvlm fpttltpsts
      901 sqekadeqlm
//
LOCUS       XP_061011176             172 aa            linear   MAM 02-DEC-2023
DEFINITION  galectin-related protein [Dama dama].
ACCESSION   XP_061011176
VERSION     XP_061011176.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155193.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..172
                     /product="galectin-related protein"
                     /calculated_mol_wt=18825
     Site            order(40..44,167..171)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238025"
     Site            40..44
                     /site_type="active"
                     /note="dimerization swap strand [active]"
                     /db_xref="CDD:238025"
     Region          46..170
                     /region_name="Gal-bind_lectin"
                     /note="Galactoside-binding lectin; smart00908"
                     /db_xref="CDD:214904"
     Site            order(49..51,54,57,129..131,136,138,141)
                     /site_type="other"
                     /note="putative alternate dimerization interface
                     [polypeptide binding]"
                     /db_xref="CDD:238025"
     Site            order(86,88,90,97,99,106,109,111)
                     /site_type="other"
                     /note="sugar binding pocket [chemical binding]"
                     /db_xref="CDD:238025"
     CDS             1..172
                     /gene="LGALSL"
                     /coded_by="XM_061155193.1:60..578"
                     /db_xref="GeneID:133064746"
ORIGIN      
        1 magsvadsda vvklddghln nslgspvqad vyfprlivpf cghikggmrp gkkvlvmgiv
       61 dlnpesfais ltcgdsedpp advaielkav ftdrqllrns cisgergeeq saipyfpfip
      121 dqpfrveilc ehprfrvfvd ghqlfdfyhr iqtlsaidti kingdlqitk lg
//
LOCUS       XP_061011177             172 aa            linear   MAM 02-DEC-2023
DEFINITION  galectin-related protein [Dama dama].
ACCESSION   XP_061011177
VERSION     XP_061011177.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155194.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..172
                     /product="galectin-related protein"
                     /calculated_mol_wt=18825
     Site            order(40..44,167..171)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238025"
     Site            40..44
                     /site_type="active"
                     /note="dimerization swap strand [active]"
                     /db_xref="CDD:238025"
     Region          46..170
                     /region_name="Gal-bind_lectin"
                     /note="Galactoside-binding lectin; smart00908"
                     /db_xref="CDD:214904"
     Site            order(49..51,54,57,129..131,136,138,141)
                     /site_type="other"
                     /note="putative alternate dimerization interface
                     [polypeptide binding]"
                     /db_xref="CDD:238025"
     Site            order(86,88,90,97,99,106,109,111)
                     /site_type="other"
                     /note="sugar binding pocket [chemical binding]"
                     /db_xref="CDD:238025"
     CDS             1..172
                     /gene="LGALSL"
                     /coded_by="XM_061155194.1:80..598"
                     /db_xref="GeneID:133064746"
ORIGIN      
        1 magsvadsda vvklddghln nslgspvqad vyfprlivpf cghikggmrp gkkvlvmgiv
       61 dlnpesfais ltcgdsedpp advaielkav ftdrqllrns cisgergeeq saipyfpfip
      121 dqpfrveilc ehprfrvfvd ghqlfdfyhr iqtlsaidti kingdlqitk lg
//
LOCUS       XP_061011178             418 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase pellino homolog 1 [Dama dama].
ACCESSION   XP_061011178
VERSION     XP_061011178.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155195.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..418
                     /product="E3 ubiquitin-protein ligase pellino homolog 1"
                     /calculated_mol_wt=46155
     Region          10..418
                     /region_name="Pellino"
                     /note="pfam04710"
                     /db_xref="CDD:461403"
     CDS             1..418
                     /gene="PELI1"
                     /coded_by="XM_061155195.1:395..1651"
                     /db_xref="GeneID:133064752"
ORIGIN      
        1 mfspdqenhp skapvkygel ivlgyngslp ngdrgrrksr falfkrpkan gvkpstvhia
       61 ctpqaakais nkdqhsisyt lsraqtvvve ythdsntdmf qigrstespi dfvvtdtvpg
      121 sqsnsdtqsv qstisrfacr iicernppft ariyaagfds skniflgeka akwktsdgqm
      181 dglttngvlv mhprngfted skpgiwreis vcgnvfslre trsaqqrgkm veietnqlqd
      241 gslidlcgat llwrtaegls htptvkhlea lrqeinaarp qcpvgfntla fpsmkrkdvv
      301 dekqpwvyln cghvhgyhnw gnkeerdgkd recpmcrsvg pyvplwlgce agfyvdagpp
      361 thafspcghv csekttayws qiplphgtht fhaacpfcah qlageqgyir lifqgpld
//
LOCUS       XP_061011179             479 aa            linear   MAM 02-DEC-2023
DEFINITION  vacuolar protein sorting-associated protein 54-like isoform X1
            [Dama dama].
ACCESSION   XP_061011179
VERSION     XP_061011179.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155196.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..479
                     /product="vacuolar protein sorting-associated protein
                     54-like isoform X1"
                     /calculated_mol_wt=54728
     CDS             1..479
                     /gene="LOC133064753"
                     /coded_by="XM_061155196.1:46..1485"
                     /db_xref="GeneID:133064753"
ORIGIN      
        1 masshssspv pqgsssdvff kkevdptkhv rpvqslpdvc pkeptgdsns lcvapslvtd
       61 qhrwtiyhsk vnlpaalndp rlakresdff tktwgldfvd tevipsfylp qiskehftvy
      121 qqeisqreki hercknicpp kdtfdrtllh thdksrtdle qvpkifmkpd falddsltfn
      181 svlpwshfnt aggkgnrdaa sskllqekls hyldivevni ahqislrsea ffhamtsqhe
      241 lqdylkktsq avkmlrdkia qidkvmcegs lhilrlaltr nncvkvynkl klmatvhqtq
      301 ptvqvllsts efvgaldlia ttqevlqqel qgihsfrhlg sqlcelekli dkmmiaefst
      361 yshsdlnrpl eddcqileee rlislvfgll kqrklnflei yseemiitak niikqcvink
      421 vsqiedidtd vvlkladqmr mlnfpqwfdl ltdifskfti flqrvkvslc dlsvcpeys
//
LOCUS       XP_061011180             479 aa            linear   MAM 02-DEC-2023
DEFINITION  vacuolar protein sorting-associated protein 54-like isoform X1
            [Dama dama].
ACCESSION   XP_061011180
VERSION     XP_061011180.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155197.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..479
                     /product="vacuolar protein sorting-associated protein
                     54-like isoform X1"
                     /calculated_mol_wt=54728
     CDS             1..479
                     /gene="LOC133064753"
                     /coded_by="XM_061155197.1:136..1575"
                     /db_xref="GeneID:133064753"
ORIGIN      
        1 masshssspv pqgsssdvff kkevdptkhv rpvqslpdvc pkeptgdsns lcvapslvtd
       61 qhrwtiyhsk vnlpaalndp rlakresdff tktwgldfvd tevipsfylp qiskehftvy
      121 qqeisqreki hercknicpp kdtfdrtllh thdksrtdle qvpkifmkpd falddsltfn
      181 svlpwshfnt aggkgnrdaa sskllqekls hyldivevni ahqislrsea ffhamtsqhe
      241 lqdylkktsq avkmlrdkia qidkvmcegs lhilrlaltr nncvkvynkl klmatvhqtq
      301 ptvqvllsts efvgaldlia ttqevlqqel qgihsfrhlg sqlcelekli dkmmiaefst
      361 yshsdlnrpl eddcqileee rlislvfgll kqrklnflei yseemiitak niikqcvink
      421 vsqiedidtd vvlkladqmr mlnfpqwfdl ltdifskfti flqrvkvslc dlsvcpeys
//
LOCUS       XP_061011181             467 aa            linear   MAM 02-DEC-2023
DEFINITION  vacuolar protein sorting-associated protein 54-like isoform X2
            [Dama dama].
ACCESSION   XP_061011181
VERSION     XP_061011181.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155198.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..467
                     /product="vacuolar protein sorting-associated protein
                     54-like isoform X2"
                     /calculated_mol_wt=53584
     CDS             1..467
                     /gene="LOC133064753"
                     /coded_by="XM_061155198.1:46..1449"
                     /db_xref="GeneID:133064753"
ORIGIN      
        1 masshssspv pqgsssdvff kkevdptkhv rpvqslpdvc pkeptvtdqh rwtiyhskvn
       61 lpaalndprl akresdfftk twgldfvdte vipsfylpqi skehftvyqq eisqrekihe
      121 rcknicppkd tfdrtllhth dksrtdleqv pkifmkpdfa lddsltfnsv lpwshfntag
      181 gkgnrdaass kllqeklshy ldivevniah qislrseaff hamtsqhelq dylkktsqav
      241 kmlrdkiaqi dkvmcegslh ilrlaltrnn cvkvynklkl matvhqtqpt vqvllstsef
      301 vgaldliatt qevlqqelqg ihsfrhlgsq lceleklidk mmiaefstys hsdlnrpled
      361 dcqileeerl islvfgllkq rklnfleiys eemiitakni ikqcvinkvs qiedidtdvv
      421 lkladqmrml nfpqwfdllt difskftifl qrvkvslcdl svcpeys
//
LOCUS       XP_061011182             376 aa            linear   MAM 02-DEC-2023
DEFINITION  vacuolar protein sorting-associated protein 54-like isoform X3
            [Dama dama].
ACCESSION   XP_061011182
VERSION     XP_061011182.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155199.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..376
                     /product="vacuolar protein sorting-associated protein
                     54-like isoform X3"
                     /calculated_mol_wt=43329
     CDS             1..376
                     /gene="LOC133064753"
                     /coded_by="XM_061155199.1:133..1263"
                     /db_xref="GeneID:133064753"
ORIGIN      
        1 mcvprnpqis kehftvyqqe isqrekiher cknicppkdt fdrtllhthd ksrtdleqvp
       61 kifmkpdfal ddsltfnsvl pwshfntagg kgnrdaassk llqeklshyl divevniahq
      121 islrseaffh amtsqhelqd ylkktsqavk mlrdkiaqid kvmcegslhi lrlaltrnnc
      181 vkvynklklm atvhqtqptv qvllstsefv galdliattq evlqqelqgi hsfrhlgsql
      241 celeklidkm miaefstysh sdlnrpledd cqileeerli slvfgllkqr klnfleiyse
      301 emiitaknii kqcvinkvsq iedidtdvvl kladqmrmln fpqwfdlltd ifskftiflq
      361 rvkvslcdls vcpeys
//
LOCUS       XP_061011183             977 aa            linear   MAM 02-DEC-2023
DEFINITION  vacuolar protein sorting-associated protein 54 isoform X1 [Dama
            dama].
ACCESSION   XP_061011183
VERSION     XP_061011183.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155200.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..977
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..977
                     /product="vacuolar protein sorting-associated protein 54
                     isoform X1"
                     /calculated_mol_wt=110526
     Region          737..865
                     /region_name="Vps54"
                     /note="Vps54-like protein; pfam07928"
                     /db_xref="CDD:462318"
     CDS             1..977
                     /gene="LOC133064755"
                     /coded_by="XM_061155200.1:136..3069"
                     /db_xref="GeneID:133064755"
ORIGIN      
        1 masshssspv pqgsssdvff kkevdptkhv rpvqslpdvc pkeptgdsns lcvapslvtd
       61 qhrwtiyhsk vnlpaalndp rlakresdff tktwgldfvd tevipsfylp qiskehftvy
      121 qqeisqreki hercknicpp kdtfdrtllh thdksrtdle qvpkifmkpd falddsltfn
      181 svlpwshfnt aggkgnrdaa sskllqekls hyldivevni ahqislrsea ffhamtsqhe
      241 lqdylkktsq avkmlrdkia qidkvmcegs lhilrlaltr nncvkvynkl klmatvhqtq
      301 ptvqvllsts efvgaldlia ttqevlqqel qgihsfrhlg sqlcelekli dkmmiaefst
      361 yshsdlnrpl eddcqileee rlislvfgll kqrklnflei yseemiitak niikqcvink
      421 vsqiedidtd vvlkladqmr mlnfpqwfdl ltdifskfti flqrvkatln iihsvvlsvl
      481 dknqrtrele eisqqknaak dnsldtevay lihegmfisd afseseltpi aidttsqrna
      541 spnsepcssd svsepecttd sssskeliss svtpgavdim vnedvkltdl elgklanniq
      601 ellysasdic hdravkflms rakdgflekl nstefislsr lmetfilete qicgrksmsl
      661 lgalqsqank fvnrfheerk tklsllldne rwkqadvpae fqdlvdsisd gkialpekks
      721 gatedrkpae vltvegqqya vvgtvlllir iileycqcvd nipsvttdml trlsdllkyf
      781 nsrscqlvlg agalqvvglk tittknlals srclqlivhy ipvirahfea rlqpkqysml
      841 rhfdhitkdy hdhiaeisak lvaimdslfd kllskyevka pvpsacfrni ckqmakmhea
      901 ifdllpeeqt qmlflrinas yklhlkkqls hlnvindggp qnglvtadva fytgnlqalk
      961 glkdldlnma eiweqkr
//
LOCUS       XP_061011184             965 aa            linear   MAM 02-DEC-2023
DEFINITION  vacuolar protein sorting-associated protein 54 isoform X2 [Dama
            dama].
ACCESSION   XP_061011184
VERSION     XP_061011184.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155201.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..965
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..965
                     /product="vacuolar protein sorting-associated protein 54
                     isoform X2"
                     /calculated_mol_wt=109382
     Region          725..853
                     /region_name="Vps54"
                     /note="Vps54-like protein; pfam07928"
                     /db_xref="CDD:462318"
     CDS             1..965
                     /gene="LOC133064755"
                     /coded_by="XM_061155201.1:21..2918"
                     /db_xref="GeneID:133064755"
ORIGIN      
        1 masshssspv pqgsssdvff kkevdptkhv rpvqslpdvc pkeptvtdqh rwtiyhskvn
       61 lpaalndprl akresdfftk twgldfvdte vipsfylpqi skehftvyqq eisqrekihe
      121 rcknicppkd tfdrtllhth dksrtdleqv pkifmkpdfa lddsltfnsv lpwshfntag
      181 gkgnrdaass kllqeklshy ldivevniah qislrseaff hamtsqhelq dylkktsqav
      241 kmlrdkiaqi dkvmcegslh ilrlaltrnn cvkvynklkl matvhqtqpt vqvllstsef
      301 vgaldliatt qevlqqelqg ihsfrhlgsq lceleklidk mmiaefstys hsdlnrpled
      361 dcqileeerl islvfgllkq rklnfleiys eemiitakni ikqcvinkvs qiedidtdvv
      421 lkladqmrml nfpqwfdllt difskftifl qrvkatlnii hsvvlsvldk nqrtreleei
      481 sqqknaakdn sldtevayli hegmfisdaf seseltpiai dttsqrnasp nsepcssdsv
      541 sepecttdss sskelisssv tpgavdimvn edvkltdlel gklanniqel lysasdichd
      601 ravkflmsra kdgfleklns tefislsrlm etfileteqi cgrksmsllg alqsqankfv
      661 nrfheerktk lsllldnerw kqadvpaefq dlvdsisdgk ialpekksga tedrkpaevl
      721 tvegqqyavv gtvlllirii leycqcvdni psvttdmltr lsdllkyfns rscqlvlgag
      781 alqvvglkti ttknlalssr clqlivhyip virahfearl qpkqysmlrh fdhitkdyhd
      841 hiaeisaklv aimdslfdkl lskyevkapv psacfrnick qmakmheaif dllpeeqtqm
      901 lflrinasyk lhlkkqlshl nvindggpqn glvtadvafy tgnlqalkgl kdldlnmaei
      961 weqkr
//
LOCUS       XP_061011185             874 aa            linear   MAM 02-DEC-2023
DEFINITION  vacuolar protein sorting-associated protein 54 isoform X3 [Dama
            dama].
ACCESSION   XP_061011185
VERSION     XP_061011185.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155202.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..874
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..874
                     /product="vacuolar protein sorting-associated protein 54
                     isoform X3"
                     /calculated_mol_wt=99128
     Region          634..762
                     /region_name="Vps54"
                     /note="Vps54-like protein; pfam07928"
                     /db_xref="CDD:462318"
     CDS             1..874
                     /gene="LOC133064755"
                     /coded_by="XM_061155202.1:133..2757"
                     /db_xref="GeneID:133064755"
ORIGIN      
        1 mcvprnpqis kehftvyqqe isqrekiher cknicppkdt fdrtllhthd ksrtdleqvp
       61 kifmkpdfal ddsltfnsvl pwshfntagg kgnrdaassk llqeklshyl divevniahq
      121 islrseaffh amtsqhelqd ylkktsqavk mlrdkiaqid kvmcegslhi lrlaltrnnc
      181 vkvynklklm atvhqtqptv qvllstsefv galdliattq evlqqelqgi hsfrhlgsql
      241 celeklidkm miaefstysh sdlnrpledd cqileeerli slvfgllkqr klnfleiyse
      301 emiitaknii kqcvinkvsq iedidtdvvl kladqmrmln fpqwfdlltd ifskftiflq
      361 rvkatlniih svvlsvldkn qrtreleeis qqknaakdns ldtevaylih egmfisdafs
      421 eseltpiaid ttsqrnaspn sepcssdsvs epecttdsss skelisssvt pgavdimvne
      481 dvkltdlelg klanniqell ysasdichdr avkflmsrak dgfleklnst efislsrlme
      541 tfileteqic grksmsllga lqsqankfvn rfheerktkl sllldnerwk qadvpaefqd
      601 lvdsisdgki alpekksgat edrkpaevlt vegqqyavvg tvllliriil eycqcvdnip
      661 svttdmltrl sdllkyfnsr scqlvlgaga lqvvglktit tknlalssrc lqlivhyipv
      721 irahfearlq pkqysmlrhf dhitkdyhdh iaeisaklva imdslfdkll skyevkapvp
      781 sacfrnickq makmheaifd llpeeqtqml flrinasykl hlkkqlshln vindggpqng
      841 lvtadvafyt gnlqalkglk dldlnmaeiw eqkr
//
LOCUS       XP_061011186             508 aa            linear   MAM 02-DEC-2023
DEFINITION  UTP--glucose-1-phosphate uridylyltransferase isoform X1 [Dama
            dama].
ACCESSION   XP_061011186
VERSION     XP_061011186.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155203.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..508
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     isoform X1"
                     /calculated_mol_wt=56786
     Region          55..473
                     /region_name="UDPGP"
                     /note="UTP--glucose-1-phosphate uridylyltransferase;
                     pfam01704"
                     /db_xref="CDD:460300"
     CDS             1..508
                     /gene="UGP2"
                     /coded_by="XM_061155203.1:224..1750"
                     /db_xref="GeneID:133064756"
ORIGIN      
        1 msrfvqdlsk amsqdgasqf qevirqelel svkkelekil ttapshefeh tkkdldgfrk
       61 lfhrflqekg psvdwgkiqr ppedsiqpye kikarglpdn issvlnklvv vklngglgts
      121 mgckgpksli gvrnentfld ltvqqiehln ktydtdvplv lmnsfntded tkkilqkynh
      181 crvkiytfnq sryprinkes llpvaknvsy sgenteawyp pghgdiyasf ynsglldtfi
      241 gegkeyifvs nidnlgatvd lyilnhlmnp pngkpcefvm evtnktradv kggtltqyeg
      301 klrlveiaqv pkahvdefks vskfkifntn nlwislaavk rlqeqnaidm eiivnpktld
      361 gglnviqlet avgaaiksfe nslginvprs rflpvkttsd lllvmsnlys lnagsltmse
      421 krefptvplv klgssftkvq dylrrfesip dmleldhltv sgdvtfgknv slkgtviiia
      481 nhgdridipp gavlenkivs gnlrildh
//
LOCUS       XP_061011187             497 aa            linear   MAM 02-DEC-2023
DEFINITION  UTP--glucose-1-phosphate uridylyltransferase isoform X2 [Dama
            dama].
ACCESSION   XP_061011187
VERSION     XP_061011187.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155204.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..497
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     isoform X2"
                     /calculated_mol_wt=55523
     Region          44..462
                     /region_name="UDPGP"
                     /note="UTP--glucose-1-phosphate uridylyltransferase;
                     pfam01704"
                     /db_xref="CDD:460300"
     CDS             1..497
                     /gene="UGP2"
                     /coded_by="XM_061155204.1:155..1648"
                     /db_xref="GeneID:133064756"
ORIGIN      
        1 msqdgasqfq evirqelels vkkelekilt tapshefeht kkdldgfrkl fhrflqekgp
       61 svdwgkiqrp pedsiqpyek ikarglpdni ssvlnklvvv klngglgtsm gckgpkslig
      121 vrnentfldl tvqqiehlnk tydtdvplvl mnsfntdedt kkilqkynhc rvkiytfnqs
      181 ryprinkesl lpvaknvsys genteawypp ghgdiyasfy nsglldtfig egkeyifvsn
      241 idnlgatvdl yilnhlmnpp ngkpcefvme vtnktradvk ggtltqyegk lrlveiaqvp
      301 kahvdefksv skfkifntnn lwislaavkr lqeqnaidme iivnpktldg glnviqleta
      361 vgaaiksfen slginvprsr flpvkttsdl llvmsnlysl nagsltmsek refptvplvk
      421 lgssftkvqd ylrrfesipd mleldhltvs gdvtfgknvs lkgtviiian hgdridippg
      481 avlenkivsg nlrildh
//
LOCUS       XP_061011188             497 aa            linear   MAM 02-DEC-2023
DEFINITION  UTP--glucose-1-phosphate uridylyltransferase isoform X2 [Dama
            dama].
ACCESSION   XP_061011188
VERSION     XP_061011188.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155205.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..497
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     isoform X2"
                     /calculated_mol_wt=55523
     Region          44..462
                     /region_name="UDPGP"
                     /note="UTP--glucose-1-phosphate uridylyltransferase;
                     pfam01704"
                     /db_xref="CDD:460300"
     CDS             1..497
                     /gene="UGP2"
                     /coded_by="XM_061155205.1:150..1643"
                     /db_xref="GeneID:133064756"
ORIGIN      
        1 msqdgasqfq evirqelels vkkelekilt tapshefeht kkdldgfrkl fhrflqekgp
       61 svdwgkiqrp pedsiqpyek ikarglpdni ssvlnklvvv klngglgtsm gckgpkslig
      121 vrnentfldl tvqqiehlnk tydtdvplvl mnsfntdedt kkilqkynhc rvkiytfnqs
      181 ryprinkesl lpvaknvsys genteawypp ghgdiyasfy nsglldtfig egkeyifvsn
      241 idnlgatvdl yilnhlmnpp ngkpcefvme vtnktradvk ggtltqyegk lrlveiaqvp
      301 kahvdefksv skfkifntnn lwislaavkr lqeqnaidme iivnpktldg glnviqleta
      361 vgaaiksfen slginvprsr flpvkttsdl llvmsnlysl nagsltmsek refptvplvk
      421 lgssftkvqd ylrrfesipd mleldhltvs gdvtfgknvs lkgtviiian hgdridippg
      481 avlenkivsg nlrildh
//
LOCUS       XP_061011189             497 aa            linear   MAM 02-DEC-2023
DEFINITION  UTP--glucose-1-phosphate uridylyltransferase isoform X2 [Dama
            dama].
ACCESSION   XP_061011189
VERSION     XP_061011189.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155206.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..497
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     isoform X2"
                     /calculated_mol_wt=55523
     Region          44..462
                     /region_name="UDPGP"
                     /note="UTP--glucose-1-phosphate uridylyltransferase;
                     pfam01704"
                     /db_xref="CDD:460300"
     CDS             1..497
                     /gene="UGP2"
                     /coded_by="XM_061155206.1:149..1642"
                     /db_xref="GeneID:133064756"
ORIGIN      
        1 msqdgasqfq evirqelels vkkelekilt tapshefeht kkdldgfrkl fhrflqekgp
       61 svdwgkiqrp pedsiqpyek ikarglpdni ssvlnklvvv klngglgtsm gckgpkslig
      121 vrnentfldl tvqqiehlnk tydtdvplvl mnsfntdedt kkilqkynhc rvkiytfnqs
      181 ryprinkesl lpvaknvsys genteawypp ghgdiyasfy nsglldtfig egkeyifvsn
      241 idnlgatvdl yilnhlmnpp ngkpcefvme vtnktradvk ggtltqyegk lrlveiaqvp
      301 kahvdefksv skfkifntnn lwislaavkr lqeqnaidme iivnpktldg glnviqleta
      361 vgaaiksfen slginvprsr flpvkttsdl llvmsnlysl nagsltmsek refptvplvk
      421 lgssftkvqd ylrrfesipd mleldhltvs gdvtfgknvs lkgtviiian hgdridippg
      481 avlenkivsg nlrildh
//
LOCUS       XP_061011190             334 aa            linear   MAM 02-DEC-2023
DEFINITION  malate dehydrogenase, cytoplasmic [Dama dama].
ACCESSION   XP_061011190
VERSION     XP_061011190.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155207.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..334
                     /product="malate dehydrogenase, cytoplasmic"
                     /calculated_mol_wt=36307
     Region          3..328
                     /region_name="MDH_cytoplasmic_cytosolic"
                     /note="Cytoplasmic and cytosolic Malate dehydrogenases;
                     cd01336"
                     /db_xref="CDD:133421"
     Site            order(11,13..16,42,87..90,108,129,131,155,187,241)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:133421"
     Site            order(18,55..56,58..60,161..162,165,230,233,237..238,
                     242..245,248)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:133421"
     Site            order(92,98,131,158,162,187,235,242)
                     /site_type="other"
                     /note="malate binding site [chemical binding]"
                     /db_xref="CDD:133421"
     CDS             1..334
                     /gene="MDH1"
                     /coded_by="XM_061155207.1:150..1154"
                     /db_xref="GeneID:133064757"
ORIGIN      
        1 msepirvlvt gaagqiaysl lysigngsvf gkdqpiilvl lditpmmgvl dgvlmelqdc
       61 alpllkdvia tdkeeiafkd ldvailvgsm prrdgmerkd llkanvkifk cqgaaldkya
      121 kksvkvivvg npantnclta sksapsipke nfscltrldh nrakaqialk lgvtsddvkn
      181 viiwgnhsst qypdvnhakv klqgkevgvy ealkddswlk gefittvqqr gaavikarkl
      241 ssamsaakai cdhvrdiwfg tpegefvsmg iisdgnsygi pddllysfpv tikdktwkvv
      301 eglpindfsr ekmdltakel aeeketafef lasa
//
LOCUS       XP_061011191            1197 aa            linear   MAM 02-DEC-2023
DEFINITION  EH domain-binding protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061011191
VERSION     XP_061011191.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155208.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1197
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1197
                     /product="EH domain-binding protein 1 isoform X1"
                     /calculated_mol_wt=136196
     Region          12..165
                     /region_name="NT-C2"
                     /note="N-terminal C2 in EEIG1 and EHBP1 proteins;
                     pfam10358"
                     /db_xref="CDD:463058"
     Region          410..516
                     /region_name="CH_EHBP1"
                     /note="calponin homology (CH) domain found in EH
                     domain-binding protein 1 and similar proteins; cd21254"
                     /db_xref="CDD:409103"
     Site            order(411,415,465,467..468,471..472,474,482..490,498,
                     500..501,503..504,507..508,511)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409103"
     Region          1043..1176
                     /region_name="bMERB_dom"
                     /note="Bivalent Mical/EHBP Rab binding domain; pfam12130"
                     /db_xref="CDD:463467"
     CDS             1..1197
                     /gene="EHBP1"
                     /coded_by="XM_061155208.1:521..4114"
                     /db_xref="GeneID:133064758"
ORIGIN      
        1 masvwkrlqr vgkhaskfqf vasyqelmve ctkkwqpdkl vvvwtrrsrr ksskahswqp
       61 giknpyrgvv vwpvpeniei tvtlfkdpha eefedkewtf vienespsgr rkalattsin
      121 mkqyaspmpt qtdvklkfkp lskkvvsatl qfslsciflr egkatdedmq slaslmsmkq
      181 adignlddfe ednedddenr vnqeekaaki telinklnfl deaekdlatv nlnpfgdpdv
      241 aelnpfgdpd seeqitetis pkkpeesfys nsynpfkevq tpqylnpfde petfvtvkds
      301 ppqstkrkni rpvdmskyly adsskaeeee ldesnpfyep kptpppnnll spvqeleter
      361 rvkrkapapp aispktggvn entgvsagrd fstspkpspi pspvlgrkpn asqsllvwck
      421 evtknyrgvk itnfttswrn glsfcailhh frpdlidyks lnpqdikenn kkaydgfasi
      481 gisrllepsd mvllaipdkl tvmtylyqir ahfsgqelnv vqieenssks tykvgnyetd
      541 tnssvdqekf yaelsdlkre pplqqppsgv vdftsqdesv fvndsgvges esehqtpddh
      601 lspntasphc rrtksdtepq ksqqssgrts gsddpgicyn tdsnhaqvsl gkkrllktet
      661 lelsdlyvsd kkkdvsppfi ceesdeqklq nldisgtleq ekldnsrple crsdpespvk
      721 kpslsptskl gylynrdadl akkkrtslrq tesdsdadrp tlnhadhsak tvqhrmlsrq
      781 eelkerarvl leqarrdaal kagnkqhtna atplcnrqls dqqdeerrrq lrerarqlia
      841 earsgvkmse lpsygemaae klkerskasg dendnleint neeipegfvl gggdeltnle
      901 sdldtpeqdt kladlklkkl ldtqpqvans lssttqkavn esseqdikng tedlrterlq
      961 katerfrnpv vfskdatvrk tqlqsfsqyv enrpemkrqr siqedtkkgn eekaaitetq
     1021 rkpsedevln kgfkdtsqyv vgelaalene qkqidtraal vekrlrylmd tgrnteeeea
     1081 mmqewfmlvn kknalirrmn qlsllekehd lerryellnr elramlaied wqkteaqkrr
     1141 eqllldelva lvdkrdalvr dldaqekqae eedehlertl eqnkgkmakk eekcvlq
//
LOCUS       XP_061011192            1196 aa            linear   MAM 02-DEC-2023
DEFINITION  EH domain-binding protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061011192
VERSION     XP_061011192.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155209.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1196
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1196
                     /product="EH domain-binding protein 1 isoform X2"
                     /calculated_mol_wt=136068
     Region          12..165
                     /region_name="NT-C2"
                     /note="N-terminal C2 in EEIG1 and EHBP1 proteins;
                     pfam10358"
                     /db_xref="CDD:463058"
     Region          410..516
                     /region_name="CH_EHBP1"
                     /note="calponin homology (CH) domain found in EH
                     domain-binding protein 1 and similar proteins; cd21254"
                     /db_xref="CDD:409103"
     Site            order(411,415,465,467..468,471..472,474,482..490,498,
                     500..501,503..504,507..508,511)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409103"
     Region          1042..1175
                     /region_name="bMERB_dom"
                     /note="Bivalent Mical/EHBP Rab binding domain; pfam12130"
                     /db_xref="CDD:463467"
     CDS             1..1196
                     /gene="EHBP1"
                     /coded_by="XM_061155209.1:521..4111"
                     /db_xref="GeneID:133064758"
ORIGIN      
        1 masvwkrlqr vgkhaskfqf vasyqelmve ctkkwqpdkl vvvwtrrsrr ksskahswqp
       61 giknpyrgvv vwpvpeniei tvtlfkdpha eefedkewtf vienespsgr rkalattsin
      121 mkqyaspmpt qtdvklkfkp lskkvvsatl qfslsciflr egkatdedmq slaslmsmkq
      181 adignlddfe ednedddenr vnqeekaaki telinklnfl deaekdlatv nlnpfgdpdv
      241 aelnpfgdpd seeqitetis pkkpeesfys nsynpfkevq tpqylnpfde petfvtvkds
      301 ppqstkrkni rpvdmskyly adsskaeeee ldesnpfyep kptpppnnll spvqeleter
      361 rvkrkapapp aispktggvn entgvsagrd fstspkpspi pspvlgrkpn asqsllvwck
      421 evtknyrgvk itnfttswrn glsfcailhh frpdlidyks lnpqdikenn kkaydgfasi
      481 gisrllepsd mvllaipdkl tvmtylyqir ahfsgqelnv vqieenssks tykvgnyetd
      541 tnssvdqekf yaelsdlkre pplqqppsgv vdftsqdesv fvndsgvges esehqtpddh
      601 lspntasphc rrtksdtepq ksqqssgrts gsddpgicyn tdsnhaqvsl gkkrllktet
      661 lelsdlyvsd kkkdvsppfi ceesdeqklq nldisgtleq ekldnsrple crsdpespvk
      721 kpslsptskl gylynrdadl akkkrtslrq tesdsdadrp tlnhadhsak tvqhrmlsrq
      781 eelkerarvl leqarrdaal kagnkqhtna atplcnrqls dqdeerrrql rerarqliae
      841 arsgvkmsel psygemaaek lkerskasgd endnleintn eeipegfvlg ggdeltnles
      901 dldtpeqdtk ladlklkkll dtqpqvansl ssttqkavne sseqdikngt edlrterlqk
      961 aterfrnpvv fskdatvrkt qlqsfsqyve nrpemkrqrs iqedtkkgne ekaaitetqr
     1021 kpsedevlnk gfkdtsqyvv gelaaleneq kqidtraalv ekrlrylmdt grnteeeeam
     1081 mqewfmlvnk knalirrmnq lsllekehdl erryellnre lramlaiedw qkteaqkrre
     1141 qllldelval vdkrdalvrd ldaqekqaee edehlertle qnkgkmakke ekcvlq
//
LOCUS       XP_061011193            1161 aa            linear   MAM 02-DEC-2023
DEFINITION  EH domain-binding protein 1 isoform X3 [Dama dama].
ACCESSION   XP_061011193
VERSION     XP_061011193.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155210.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1161
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1161
                     /product="EH domain-binding protein 1 isoform X3"
                     /calculated_mol_wt=132295
     Region          12..165
                     /region_name="NT-C2"
                     /note="N-terminal C2 in EEIG1 and EHBP1 proteins;
                     pfam10358"
                     /db_xref="CDD:463058"
     Region          410..516
                     /region_name="CH_EHBP1"
                     /note="calponin homology (CH) domain found in EH
                     domain-binding protein 1 and similar proteins; cd21254"
                     /db_xref="CDD:409103"
     Site            order(411,415,465,467..468,471..472,474,482..490,498,
                     500..501,503..504,507..508,511)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409103"
     Region          1007..1140
                     /region_name="bMERB_dom"
                     /note="Bivalent Mical/EHBP Rab binding domain; pfam12130"
                     /db_xref="CDD:463467"
     CDS             1..1161
                     /gene="EHBP1"
                     /coded_by="XM_061155210.1:521..4006"
                     /db_xref="GeneID:133064758"
ORIGIN      
        1 masvwkrlqr vgkhaskfqf vasyqelmve ctkkwqpdkl vvvwtrrsrr ksskahswqp
       61 giknpyrgvv vwpvpeniei tvtlfkdpha eefedkewtf vienespsgr rkalattsin
      121 mkqyaspmpt qtdvklkfkp lskkvvsatl qfslsciflr egkatdedmq slaslmsmkq
      181 adignlddfe ednedddenr vnqeekaaki telinklnfl deaekdlatv nlnpfgdpdv
      241 aelnpfgdpd seeqitetis pkkpeesfys nsynpfkevq tpqylnpfde petfvtvkds
      301 ppqstkrkni rpvdmskyly adsskaeeee ldesnpfyep kptpppnnll spvqeleter
      361 rvkrkapapp aispktggvn entgvsagrd fstspkpspi pspvlgrkpn asqsllvwck
      421 evtknyrgvk itnfttswrn glsfcailhh frpdlidyks lnpqdikenn kkaydgfasi
      481 gisrllepsd mvllaipdkl tvmtylyqir ahfsgqelnv vqieenssks tykvgnyetd
      541 tnssvdqekf yaelsdlkre pplqqppsgv vdftsqdesv fvndsgvges esehqtpddh
      601 lspntasphc rrtksdtepq ksqqssgrts gsddpgicyn tdsnhaqvsl gkkrllktet
      661 lelsdlyvsd kkkdvsppfi ceesdeqklq nldisgtleq ekldnsrple crsdpespvk
      721 kpslsptskl gylynrdadl akkkrtslrq tesdsdadrp tlnhadhsak tvqhrmlsrq
      781 eelkerarvl leqarrdaal kagnkqhtna atplcnrqls dqqdeerrrq lrerarqlia
      841 earsgvkmse lpsygemaae klkerskasg eqdtkladlk lkklldtqpq vanslssttq
      901 kavnesseqd ikngtedlrt erlqkaterf rnpvvfskda tvrktqlqsf sqyvenrpem
      961 krqrsiqedt kkgneekaai tetqrkpsed evlnkgfkdt sqyvvgelaa leneqkqidt
     1021 raalvekrlr ylmdtgrnte eeeammqewf mlvnkknali rrmnqlslle kehdlerrye
     1081 llnrelraml aiedwqktea qkrreqllld elvalvdkrd alvrdldaqe kqaeeedehl
     1141 ertleqnkgk makkeekcvl q
//
LOCUS       XP_061011194            1160 aa            linear   MAM 02-DEC-2023
DEFINITION  EH domain-binding protein 1 isoform X4 [Dama dama].
ACCESSION   XP_061011194
VERSION     XP_061011194.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155211.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1160
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1160
                     /product="EH domain-binding protein 1 isoform X4"
                     /calculated_mol_wt=132167
     Region          12..165
                     /region_name="NT-C2"
                     /note="N-terminal C2 in EEIG1 and EHBP1 proteins;
                     pfam10358"
                     /db_xref="CDD:463058"
     Region          410..516
                     /region_name="CH_EHBP1"
                     /note="calponin homology (CH) domain found in EH
                     domain-binding protein 1 and similar proteins; cd21254"
                     /db_xref="CDD:409103"
     Site            order(411,415,465,467..468,471..472,474,482..490,498,
                     500..501,503..504,507..508,511)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409103"
     Region          1006..1139
                     /region_name="bMERB_dom"
                     /note="Bivalent Mical/EHBP Rab binding domain; pfam12130"
                     /db_xref="CDD:463467"
     CDS             1..1160
                     /gene="EHBP1"
                     /coded_by="XM_061155211.1:521..4003"
                     /db_xref="GeneID:133064758"
ORIGIN      
        1 masvwkrlqr vgkhaskfqf vasyqelmve ctkkwqpdkl vvvwtrrsrr ksskahswqp
       61 giknpyrgvv vwpvpeniei tvtlfkdpha eefedkewtf vienespsgr rkalattsin
      121 mkqyaspmpt qtdvklkfkp lskkvvsatl qfslsciflr egkatdedmq slaslmsmkq
      181 adignlddfe ednedddenr vnqeekaaki telinklnfl deaekdlatv nlnpfgdpdv
      241 aelnpfgdpd seeqitetis pkkpeesfys nsynpfkevq tpqylnpfde petfvtvkds
      301 ppqstkrkni rpvdmskyly adsskaeeee ldesnpfyep kptpppnnll spvqeleter
      361 rvkrkapapp aispktggvn entgvsagrd fstspkpspi pspvlgrkpn asqsllvwck
      421 evtknyrgvk itnfttswrn glsfcailhh frpdlidyks lnpqdikenn kkaydgfasi
      481 gisrllepsd mvllaipdkl tvmtylyqir ahfsgqelnv vqieenssks tykvgnyetd
      541 tnssvdqekf yaelsdlkre pplqqppsgv vdftsqdesv fvndsgvges esehqtpddh
      601 lspntasphc rrtksdtepq ksqqssgrts gsddpgicyn tdsnhaqvsl gkkrllktet
      661 lelsdlyvsd kkkdvsppfi ceesdeqklq nldisgtleq ekldnsrple crsdpespvk
      721 kpslsptskl gylynrdadl akkkrtslrq tesdsdadrp tlnhadhsak tvqhrmlsrq
      781 eelkerarvl leqarrdaal kagnkqhtna atplcnrqls dqdeerrrql rerarqliae
      841 arsgvkmsel psygemaaek lkerskasge qdtkladlkl kklldtqpqv anslssttqk
      901 avnesseqdi kngtedlrte rlqkaterfr npvvfskdat vrktqlqsfs qyvenrpemk
      961 rqrsiqedtk kgneekaait etqrkpsede vlnkgfkdts qyvvgelaal eneqkqidtr
     1021 aalvekrlry lmdtgrntee eeammqewfm lvnkknalir rmnqlsllek ehdlerryel
     1081 lnrelramla iedwqkteaq krreqlllde lvalvdkrda lvrdldaqek qaeeedehle
     1141 rtleqnkgkm akkeekcvlq
//
LOCUS       XP_061011195             198 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 17 [Dama dama].
ACCESSION   XP_061011195
VERSION     XP_061011195.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155212.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..198
                     /product="transmembrane protein 17"
                     /calculated_mol_wt=22989
     Region          45..151
                     /region_name="Transmemb_17"
                     /note="Predicted membrane protein; pfam09799"
                     /db_xref="CDD:462907"
     CDS             1..198
                     /gene="TMEM17"
                     /coded_by="XM_061155212.1:74..670"
                     /db_xref="GeneID:133064760"
ORIGIN      
        1 melpdpvrqr lgnfsrtvfs dsnrtgpeyn egpdnemvss lalqmslyfn tyffplwwvs
       61 simmlqmkys ilpdyykfiv vtiiilitli eairlylgym gnlqekvpel agfwllslll
      121 qlplilfllf negltnlple kavhiiftif ltfqvvsafl tlrkmvnqla trfhlqdfdr
      181 lsasrgdmrr vrscieei
//
LOCUS       XP_061011196             397 aa            linear   MAM 02-DEC-2023
DEFINITION  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2
            isoform X1 [Dama dama].
ACCESSION   XP_061011196
VERSION     XP_061011196.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155213.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..397
                     /product="N-acetyllactosaminide
                     beta-1,3-N-acetylglucosaminyltransferase 2 isoform X1"
                     /calculated_mol_wt=45705
     Region          156..348
                     /region_name="Galactosyl_T"
                     /note="Galactosyltransferase; cl21608"
                     /db_xref="CDD:473923"
     CDS             1..397
                     /gene="B3GNT2"
                     /coded_by="XM_061155213.1:161..1354"
                     /db_xref="GeneID:133064761"
ORIGIN      
        1 msvgrrrikl lgilmmvnvf iylivevsks ssqekngkge viipkerfwk isdppraywn
       61 keqeklnrrf npilntlanq tgeaygfsni shlnycepdl rvmsvvsgfd slpdrfkdfl
      121 lylrcrnysl lidqpdkcak kpflllaiks ltshfdrrqa ireswgketn agnqtvvrvf
      181 llgqtpaedn hpdlsdmlkf esekhqdill wnyrdtffnl slkevlflrw vstscpnaef
      241 vfkgdddvfv nthhllnyln slsgnkakdl figdvihnag phrdkklkyy ipevvyagvy
      301 ppyaggggfl ysgnlalrly nvtdrvllyp iddvytgmcl qklglaperh kgfrtfdiee
      361 ksrgnicsyv dlmlvhsrkp qemidiwsrl qsahlkc
//
LOCUS       XP_061011197             397 aa            linear   MAM 02-DEC-2023
DEFINITION  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2
            isoform X1 [Dama dama].
ACCESSION   XP_061011197
VERSION     XP_061011197.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155214.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..397
                     /product="N-acetyllactosaminide
                     beta-1,3-N-acetylglucosaminyltransferase 2 isoform X1"
                     /calculated_mol_wt=45705
     Region          156..348
                     /region_name="Galactosyl_T"
                     /note="Galactosyltransferase; cl21608"
                     /db_xref="CDD:473923"
     CDS             1..397
                     /gene="B3GNT2"
                     /coded_by="XM_061155214.1:269..1462"
                     /db_xref="GeneID:133064761"
ORIGIN      
        1 msvgrrrikl lgilmmvnvf iylivevsks ssqekngkge viipkerfwk isdppraywn
       61 keqeklnrrf npilntlanq tgeaygfsni shlnycepdl rvmsvvsgfd slpdrfkdfl
      121 lylrcrnysl lidqpdkcak kpflllaiks ltshfdrrqa ireswgketn agnqtvvrvf
      181 llgqtpaedn hpdlsdmlkf esekhqdill wnyrdtffnl slkevlflrw vstscpnaef
      241 vfkgdddvfv nthhllnyln slsgnkakdl figdvihnag phrdkklkyy ipevvyagvy
      301 ppyaggggfl ysgnlalrly nvtdrvllyp iddvytgmcl qklglaperh kgfrtfdiee
      361 ksrgnicsyv dlmlvhsrkp qemidiwsrl qsahlkc
//
LOCUS       XP_061011198             116 aa            linear   MAM 02-DEC-2023
DEFINITION  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2
            isoform X2 [Dama dama].
ACCESSION   XP_061011198
VERSION     XP_061011198.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155215.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..116
                     /product="N-acetyllactosaminide
                     beta-1,3-N-acetylglucosaminyltransferase 2 isoform X2"
                     /calculated_mol_wt=12737
     CDS             1..116
                     /gene="B3GNT2"
                     /coded_by="XM_061155215.1:659..1009"
                     /db_xref="GeneID:133064761"
ORIGIN      
        1 mtvrthfmlc plwgpaallt mkppqstpgt qeqrpnmpsp tephgwtqls dghksshchl
       61 rssalrnlqg sggvlswiph icsdkdpkgt erlsslpkvt qtwtfldrna pfvlks
//
LOCUS       XP_061011199              96 aa            linear   MAM 02-DEC-2023
DEFINITION  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2
            isoform X3 [Dama dama].
ACCESSION   XP_061011199
VERSION     XP_061011199.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155216.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..96
                     /product="N-acetyllactosaminide
                     beta-1,3-N-acetylglucosaminyltransferase 2 isoform X3"
                     /calculated_mol_wt=10496
     CDS             1..96
                     /gene="B3GNT2"
                     /coded_by="XM_061155216.1:164..454"
                     /db_xref="GeneID:133064761"
ORIGIN      
        1 mkppqstpgt qeqrpnmpsp tephgwtqls dghksshchl rssalrnlqg sggvlswiph
       61 icsdkdpkgt erlsslpkvt qtwtfldrna pfvlks
//
LOCUS       XP_061011200             188 aa            linear   MAM 02-DEC-2023
DEFINITION  COMM domain-containing protein 1 [Dama dama].
ACCESSION   XP_061011200
VERSION     XP_061011200.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155217.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..188
                     /product="COMM domain-containing protein 1"
                     /calculated_mol_wt=20836
     Region          11..184
                     /region_name="Commd1_MURR1"
                     /note="COMM_Domain containing protein 1, also called
                     Murr1. Murr1/Commd1 is a protein involved in copper
                     homeostasis, which has also been identified as a regulator
                     of the human delta epithelial sodium channel. The COMM
                     Domain is found at the C-terminus of a...; cd04749"
                     /db_xref="CDD:240097"
     CDS             1..188
                     /gene="COMMD1"
                     /coded_by="XM_061155217.1:46..612"
                     /db_xref="GeneID:133064763"
ORIGIN      
        1 maaelegsks lsgllsglaq dtfyghpgit eellrsqlyp evspeefrpf lakmkgilks
       61 iasadmdfhq leafltaqtk kqggitpeqa aviskfwksh ktkireslmn qsrwdsglrg
      121 lswrvdgksq srhsaqihtp vaimeleigk sgqeseflcl efdelkvnqv lkklsevees
      181 istlmqpa
//
LOCUS       XP_061011201             542 aa            linear   MAM 02-DEC-2023
DEFINITION  T-complex protein 1 subunit delta [Dama dama].
ACCESSION   XP_061011201
VERSION     XP_061011201.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155218.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..542
                     /product="T-complex protein 1 subunit delta"
                     /calculated_mol_wt=58031
     Region          28..541
                     /region_name="TCP1_delta"
                     /note="TCP-1 (CTT or eukaryotic type II) chaperonin
                     family, delta subunit. Chaperonins are involved in
                     productive folding of proteins. They share a common
                     general morphology, a double toroid of 2 stacked rings. In
                     contrast to bacterial group I chaperonins...; cd03338"
                     /db_xref="CDD:239454"
     Site            order(28,32,60..63,65,83,85,89,93,96,398,534..540)
                     /site_type="other"
                     /note="ring oligomerisation interface [polypeptide
                     binding]"
                     /db_xref="CDD:239454"
     Site            order(55..57,107,111,172,410,428,468,511,513)
                     /site_type="other"
                     /note="ATP/Mg binding site [chemical binding]"
                     /db_xref="CDD:239454"
     Site            order(448,466,475,477..478,481)
                     /site_type="active"
                     /note="stacking interactions [active]"
                     /db_xref="CDD:239454"
     CDS             1..542
                     /gene="CCT4"
                     /coded_by="XM_061155218.1:141..1769"
                     /db_xref="GeneID:133064764"
ORIGIN      
        1 mpenvaprtg ppagaagaag grgksayqdr dkpaqirfsn isaakavada irtslgpkgm
       61 dkmiqdgkgd vtitndgati lkqmqvlhpa armlvelska qdieagdgtt svviiagsll
      121 dsctkllqkg ihptiisesf qkalekgiei ltdmsrpvel sdretllnsa atslnskvvs
      181 qyssllspms vdavmkvidp atatsvdlrd ikivkklggt iddcelvegl vltqkvansg
      241 itrvekakig liqfclsapk tdmdnqivvs dyvqmdrvlr eerayilnlv kqikktgcnv
      301 lliqksilrd alsdlalhfl nkmkimvvkd ierediefic ktigtkpvah vdqftadmlg
      361 saelaeevsl ngsgklikit gcaspgktvt ivvrgsnklv ieeaersihd alcvirclvk
      421 kraliaggga peielalrlt eysrtlsgme sycirafada mevipstlae naglnpistv
      481 telrnrhaqg ekttginvrk ggisnileel vvqpllvsvs altlatetvr silkiddvvn
      541 tr
//
LOCUS       XP_061011202             717 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM161A isoform X1 [Dama dama].
ACCESSION   XP_061011202
VERSION     XP_061011202.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155219.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..717
                     /product="protein FAM161A isoform X1"
                     /calculated_mol_wt=83463
     Region          234..588
                     /region_name="UPF0564"
                     /note="Uncharacterized protein family UPF0564; pfam10595"
                     /db_xref="CDD:431382"
     CDS             1..717
                     /gene="FAM161A"
                     /coded_by="XM_061155219.1:68..2221"
                     /db_xref="GeneID:133064765"
ORIGIN      
        1 mhraaklaas slqtpvspnt garvaqyerk dplnflsaaa aameeeeeee ekeaaarlar
       61 apadfntsms rvneqkhish edfvdfsdiy hsneeyfrkl eelkaahiet makleklyqn
      121 klnlkeiqpa vtreetasvs srsvsensyh pvslmtsise pdlsqsssli vssseeelps
      181 lekkysekss mmtyakelis nmwtnfsved yiqfedvslp alekqrkkpk ewvpritvpe
      241 pfqmtvreqk kkeenmksks diemvhkllk kqeeeseckk kfranpvpaf vflplyhdiv
      301 kqnemrrkam kernkealla sqkpfkfvar eeqkqavrek qlkdffkskk ktnrfkarpi
      361 prstygstln dklteealyk niraqqrtqd flqnpsplpy sparrsfatr ksrgpeqaek
      421 skykhrvrcq tadseglper yqkhhseqkc pkfltvceps dlqaashsst krekiladie
      481 adeenlketr wpylsprrks pvrdtntkpa pcscnpptpt vssrgreqat rrsleekkml
      541 eeerhriltk qkqrmkelqk lltirakayd sheslaqmsk srikalrkse kermreyrre
      601 leereeklkn rpllfervaq knartsaekh ysntlkalgl sdefvskkgq sgkifeyfsd
      661 qemknftedk esfneeekie erengeenyl tdtnsqdsck etdevneeng eekcvee
//
LOCUS       XP_061011203             665 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM161A isoform X2 [Dama dama].
ACCESSION   XP_061011203
VERSION     XP_061011203.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155220.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..665
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..665
                     /product="protein FAM161A isoform X2"
                     /calculated_mol_wt=77956
     Region          182..536
                     /region_name="UPF0564"
                     /note="Uncharacterized protein family UPF0564; pfam10595"
                     /db_xref="CDD:431382"
     CDS             1..665
                     /gene="FAM161A"
                     /coded_by="XM_061155220.1:36..2033"
                     /db_xref="GeneID:133064765"
ORIGIN      
        1 mrtlsrpsvq adfntsmsrv neqkhished fvdfsdiyhs neeyfrklee lkaahietma
       61 kleklyqnkl nlkeiqpavt reetasvssr svsensyhpv slmtsisepd lsqssslivs
      121 sseeelpsle kkysekssmm tyakelisnm wtnfsvedyi qfedvslpal ekqrkkpkew
      181 vpritvpepf qmtvreqkkk eenmksksdi emvhkllkkq eeeseckkkf ranpvpafvf
      241 lplyhdivkq nemrrkamke rnkeallasq kpfkfvaree qkqavrekql kdffkskkkt
      301 nrfkarpipr stygstlndk lteealykni raqqrtqdfl qnpsplpysp arrsfatrks
      361 rgpeqaeksk ykhrvrcqta dseglperyq khhseqkcpk fltvcepsdl qaashsstkr
      421 ekiladiead eenlketrwp ylsprrkspv rdtntkpapc scnpptptvs srgreqatrr
      481 sleekkmlee erhriltkqk qrmkelqkll tirakaydsh eslaqmsksr ikalrkseke
      541 rmreyrrele ereeklknrp llfervaqkn artsaekhys ntlkalglsd efvskkgqsg
      601 kifeyfsdqe mknftedkes fneeekieer engeenyltd tnsqdscket devneengee
      661 kcvee
//
LOCUS       XP_061011204             661 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM161A isoform X3 [Dama dama].
ACCESSION   XP_061011204
VERSION     XP_061011204.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155221.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..661
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..661
                     /product="protein FAM161A isoform X3"
                     /calculated_mol_wt=76687
     Region          234..565
                     /region_name="UPF0564"
                     /note="Uncharacterized protein family UPF0564; pfam10595"
                     /db_xref="CDD:431382"
     CDS             1..661
                     /gene="FAM161A"
                     /coded_by="XM_061155221.1:68..2053"
                     /db_xref="GeneID:133064765"
ORIGIN      
        1 mhraaklaas slqtpvspnt garvaqyerk dplnflsaaa aameeeeeee ekeaaarlar
       61 apadfntsms rvneqkhish edfvdfsdiy hsneeyfrkl eelkaahiet makleklyqn
      121 klnlkeiqpa vtreetasvs srsvsensyh pvslmtsise pdlsqsssli vssseeelps
      181 lekkysekss mmtyakelis nmwtnfsved yiqfedvslp alekqrkkpk ewvpritvpe
      241 pfqmtvreqk kkeenmksks diemvhkllk kqeeeseckk kfranpvpaf vflplyhdiv
      301 kqnemrrkam kernkealla sqkpfkfvar eeqkqavrek qlkdffkskk ktnrfkarpi
      361 prstygstln dklteealyk niraqqrtqd flqnpsplpy sparrsfatr ksrgpeqaek
      421 skykhrvrcq tadseglper yqkhhseqkc pkfltvceps dlqaashsst krekiladie
      481 adeenlketr wpylsprrks pvrdtntkpa pcscnpptpt vssrgreqat rksekermre
      541 yrreleeree klknrpllfe rvaqknarts aekhysntlk alglsdefvs kkgqsgkife
      601 yfsdqemknf tedkesfnee ekieerenge enyltdtnsq dscketdevn eengeekcve
      661 e
//
LOCUS       XP_061011205             649 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM161A isoform X4 [Dama dama].
ACCESSION   XP_061011205
VERSION     XP_061011205.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155222.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..649
                     /product="protein FAM161A isoform X4"
                     /calculated_mol_wt=76164
     Region          166..520
                     /region_name="UPF0564"
                     /note="Uncharacterized protein family UPF0564; pfam10595"
                     /db_xref="CDD:431382"
     CDS             1..649
                     /gene="FAM161A"
                     /coded_by="XM_061155222.1:838..2787"
                     /db_xref="GeneID:133064765"
ORIGIN      
        1 msrvneqkhi shedfvdfsd iyhsneeyfr kleelkaahi etmaklekly qnklnlkeiq
       61 pavtreetas vssrsvsens yhpvslmtsi sepdlsqsss livssseeel pslekkysek
      121 ssmmtyakel isnmwtnfsv edyiqfedvs lpalekqrkk pkewvpritv pepfqmtvre
      181 qkkkeenmks ksdiemvhkl lkkqeeesec kkkfranpvp afvflplyhd ivkqnemrrk
      241 amkernkeal lasqkpfkfv areeqkqavr ekqlkdffks kkktnrfkar piprstygst
      301 lndklteeal ykniraqqrt qdflqnpspl pysparrsfa trksrgpeqa ekskykhrvr
      361 cqtadseglp eryqkhhseq kcpkfltvce psdlqaashs stkrekilad ieadeenlke
      421 trwpylsprr kspvrdtntk papcscnppt ptvssrgreq atrrsleekk mleeerhril
      481 tkqkqrmkel qklltiraka ydsheslaqm sksrikalrk sekermreyr releereekl
      541 knrpllferv aqknartsae khysntlkal glsdefvskk gqsgkifeyf sdqemknfte
      601 dkesfneeek ieerengeen yltdtnsqds cketdevnee ngeekcvee
//
LOCUS       XP_061011206             124 aa            linear   MAM 02-DEC-2023
DEFINITION  cytochrome b-c1 complex subunit 7-like [Dama dama].
ACCESSION   XP_061011206
VERSION     XP_061011206.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155223.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..124
                     /product="cytochrome b-c1 complex subunit 7-like"
                     /calculated_mol_wt=14781
     Region          26..123
                     /region_name="UCR_14kD"
                     /note="Ubiquinol-cytochrome C reductase complex 14kD
                     subunit; pfam02271"
                     /db_xref="CDD:460519"
     CDS             1..124
                     /gene="LOC133064766"
                     /coded_by="XM_061155223.1:2191..2565"
                     /db_xref="GeneID:133064766"
ORIGIN      
        1 mvtavkklkd amflcqvnma gwpavassrw legirkwyyn aagfnklglm qddtiyendd
       61 vkeairrlpe nlyndkvfhi kraldlsmrq qilpkeqwtk heedkfylep ylkevirerk
      121 eree
//
LOCUS       XP_061011207            1071 aa            linear   MAM 02-DEC-2023
DEFINITION  exportin-1 isoform X1 [Dama dama].
ACCESSION   XP_061011207
VERSION     XP_061011207.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155224.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1071
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1071
                     /product="exportin-1 isoform X1"
                     /calculated_mol_wt=123011
     Region          15..1044
                     /region_name="CRM1"
                     /note="Importin beta-related nuclear transport receptor
                     [Nuclear structure / Intracellular trafficking and
                     secretion]; COG5101"
                     /db_xref="CDD:227432"
     CDS             1..1071
                     /gene="XPO1"
                     /coded_by="XM_061155224.1:790..4005"
                     /db_xref="GeneID:133064767"
ORIGIN      
        1 mpaimtmlad haarqlldfs qkldinlldn vvnclyhgeg aqqrmaqevl thlkehpdaw
       61 trvdtilefs qnmntkyygl qilenviktr wkilprnqce gikkyvvgli iktssdptcv
      121 ekekvyigkl nmilvqilkq ewpkhwptfi sdivgasrts eslcqnnmvi lkllseevfd
      181 fssgqitqvk akhlkdsmcn efsqifqlcq fvmensqnap lvhatletll rflnwiplgy
      241 ifetklistl iykflnvpmf rnvslkclte iagvsvsqye eqfvtlftlt mmqlkqmlpl
      301 ntnirlaysn gkddeqnfiq nlslflctfl kehgqliekr lnlretlmea lhymllvsev
      361 eeteifkicl eywnhlaael yrespfstsa spllsgsqhf dvpprrqlyl pvlskvrllm
      421 vsrmakpeev lvvendqgev vrefmkdtds inlyknmret lvylthldyv dterimtekl
      481 hnqvngtews wknlntlcwa igsisgamhe edekrflvtv ikdllglceq krgkdnkaii
      541 asnimyivgq yprflrahwk flktvvnklf efmhethdgv qdmacdtfik iaqkcrrhfv
      601 qvqvgevmpf ideilnnint iicdlqpqqv htfyeavgym igaqtdqtvq ehliekymll
      661 pnqvwdsiiq qatknvdilk dpetvkqlgs ilktnvrack avghpfviql griyldmlnv
      721 ykclsenisa aiqangemvt kqplirsmrt vkretlklis gwvsrsndpq mvaenfvppl
      781 ldavlidyqr nvpaarepev lstmaiivnk lgghitaeip qifdavfect lnminkdfee
      841 ypehrtnffl llqavnshcf paflaippaq fklvldsiiw afkhtmrnva dtglqilftl
      901 lqnvaqeeaa aqsfyqtyfc dilqhifsvv tdtshtaglt mhasilaymf nlveegkist
      961 plnpgnpvnn qmfiqeyvan llksafphlq daqvklfvtg lfslnqdipa fkehlrdflv
     1021 qikefagedt sdlfleeret alrqaqeekh klqmsvpgil npheipeemc d
//
LOCUS       XP_061011208             940 aa            linear   MAM 02-DEC-2023
DEFINITION  exportin-1 isoform X2 [Dama dama].
ACCESSION   XP_061011208
VERSION     XP_061011208.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155225.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..940
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..940
                     /product="exportin-1 isoform X2"
                     /calculated_mol_wt=107941
     Region          1..913
                     /region_name="CRM1"
                     /note="Importin beta-related nuclear transport receptor
                     [Nuclear structure / Intracellular trafficking and
                     secretion]; COG5101"
                     /db_xref="CDD:227432"
     CDS             1..940
                     /gene="XPO1"
                     /coded_by="XM_061155225.1:332..3154"
                     /db_xref="GeneID:133064767"
ORIGIN      
        1 milvqilkqe wpkhwptfis divgasrtse slcqnnmvil kllseevfdf ssgqitqvka
       61 khlkdsmcne fsqifqlcqf vmensqnapl vhatletllr flnwiplgyi fetklistli
      121 ykflnvpmfr nvslkcltei agvsvsqyee qfvtlftltm mqlkqmlpln tnirlaysng
      181 kddeqnfiqn lslflctflk ehgqliekrl nlretlmeal hymllvseve eteifkicle
      241 ywnhlaaely respfstsas pllsgsqhfd vpprrqlylp vlskvrllmv srmakpeevl
      301 vvendqgevv refmkdtdsi nlyknmretl vylthldyvd terimteklh nqvngtewsw
      361 knlntlcwai gsisgamhee dekrflvtvi kdllglceqk rgkdnkaiia snimyivgqy
      421 prflrahwkf lktvvnklfe fmhethdgvq dmacdtfiki aqkcrrhfvq vqvgevmpfi
      481 deilnninti icdlqpqqvh tfyeavgymi gaqtdqtvqe hliekymllp nqvwdsiiqq
      541 atknvdilkd petvkqlgsi lktnvracka vghpfviqlg riyldmlnvy kclsenisaa
      601 iqangemvtk qplirsmrtv kretlklisg wvsrsndpqm vaenfvppll davlidyqrn
      661 vpaarepevl stmaiivnkl gghitaeipq ifdavfectl nminkdfeey pehrtnffll
      721 lqavnshcfp aflaippaqf klvldsiiwa fkhtmrnvad tglqilftll qnvaqeeaaa
      781 qsfyqtyfcd ilqhifsvvt dtshtagltm hasilaymfn lveegkistp lnpgnpvnnq
      841 mfiqeyvanl lksafphlqd aqvklfvtgl fslnqdipaf kehlrdflvq ikefagedts
      901 dlfleereta lrqaqeekhk lqmsvpgiln pheipeemcd
//
LOCUS       XP_061011209            3536 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin carboxyl-terminal hydrolase 34 isoform X1 [Dama dama].
ACCESSION   XP_061011209
VERSION     XP_061011209.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155226.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3536
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3536
                     /product="ubiquitin carboxyl-terminal hydrolase 34 isoform
                     X1"
                     /calculated_mol_wt=402562
     Region          1882..2231
                     /region_name="peptidase_C19C"
                     /note="A subfamily of Peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; cd02659"
                     /db_xref="CDD:239124"
     Site            order(1888,1893,2154,2178)
                     /site_type="active"
                     /db_xref="CDD:239124"
     Region          2349..2682
                     /region_name="DUF3517"
                     /note="Domain of unknown function (DUF3517); pfam12030"
                     /db_xref="CDD:463438"
     CDS             1..3536
                     /gene="USP34"
                     /coded_by="XM_061155226.1:16..10626"
                     /db_xref="GeneID:133064769"
ORIGIN      
        1 mdmnlvsdie ggdglqlrke htlkifayin swtqrqclcc fkeykhleif nqvvcalinl
       61 viaqvqvlrd qlckhcttin idstwqdesn qaeepqnier ecnegsterq ksiekksnss
      121 ricnlteees sknsdpfslw stdekeklll cvakifqiqf plytaykhnt hptiedistq
      181 esnilgafcd mndvevplhl lryvclfcgk nglslmkdcf eygtpetlpf liahafitvv
      241 sniriwlhip avmqhiipfr tyvirylckl sdqelrqsaa rnmadlmwst vkepldttlc
      301 fdkesldlaf kyfmsptltm rlaglsqitn qlhtfndvcn neslvsdtet siakeladwl
      361 isnnvvehif gpnlhieiik qcqvilnfla aegrlstqhi dciwaaaqlk hcsryihdlf
      421 psliknldpv plrhllnlvs alepsvhteq tlylasmlik alwnnalaak aqlskqssfa
      481 sllntnlpig nkkeeeelrr aapspwspaa spqssdnsdt hqsggsdiem deqlinrtkh
      541 vqqrlsdtee smqgssdeta nsgedgssgp gsssghsdgs snevnsshas qsagspgsel
      601 qsediadiea lkeededddh ghnppksscg tdlrnrkles qagiclgdsq gpsersgtns
      661 gtgkdlvfnt esmpsvdnri rmldacshse dpehdisgem naahiaqasq escitrtgdf
      721 lgeaignelf ncrqfigpqh hhhhhhhhhh dghmvddmls addvscsssq vsakseknma
      781 dfdgeesgce eelvqinsha eltshlqqhl pnlasiyheh lsqgpavhkh qfnsnavtdi
      841 nldnvckkgn tllwdivqdd davnlsegli neaekllcsl vcwftdrqir mrfiegclen
      901 lgnnrsvvis lrllpklfgt fqqfgssydt hwitmwaeke lnmmklffdn lvyyiqavre
      961 grqkhalysh saevqvrlqf ltcvfstlgs pdhfrlsleq vdilwhclve dsecyddalh
     1021 wflnqvrskd qhamgmetyk hlflekmpql kpetismtgl nlfqhlcnla rlatsaydgg
     1081 snselcgmdq fwgialraqs gdvsraaiqy insyyingkt glekeqefis kcmeslmias
     1141 ssleqeshss ltviergllm lkthleafrr rfayhlrqwq iegtgisshl kalsdkqslp
     1201 lrvvcqpagl pdkmtiemyp sdqvadlrae vthwyenlqk eqisqqaqlq efgqssrkge
     1261 fpgglmgpvr missgheltt dydekalhel gfkdmqmvfv slgaprrerk gegvqlpasc
     1321 lpppqkdnip mllllqephl ttlfdlleml asfkppsgkm avedseslrc eelhlhaenl
     1381 srrvwellml lptcpnmlma fqnisdeqsn dglnwkellk iksahkllya leiiealgkp
     1441 nrrirrestg sysdlypdsd dssedqvens knswsckfva agglqqllei fnsgilepke
     1501 qeswtvwqld clacllklic qfavdpsdld layhdvfaws giaeshrkrt wpgksrkaag
     1561 dhakglhipr ltevflvlvq gtsliqrlms vaytydnlap rvlkaqsdhr srhevshysm
     1621 wllvswahcc slvksslads dhlqdwlkkl tllipetavr hescnglykl slsgldggds
     1681 inrsflllaa stllkflpda qalkpiridd yeeepmlkpg ckeyfwllck lvdnihikda
     1741 sqttlldlda larhladcir sreildhqdg nieddgltgl lrlatsvikh kppfkfsreg
     1801 qeflrdifnl lfllpslkdr qqpkckshss raaaydllve mvkgsvenyr lihnwvmaqh
     1861 mqshapykwd ywphedvrae crfvgltnlg atcylastiq qlymipearq avftakysed
     1921 mkhkttllel qkmftylmes eckaynprpf cktytmdkqp lntgeqkdmt efftdlitki
     1981 eemspelknt vkslfggvit nnvvsldceh vsqtaeefyt vrcqvadmkn iyesldevti
     2041 kdtlegdnmy tcshcgkkvr aekracfkkl prilsfntmr ytfnmvtmmk ekvnthfsfp
     2101 lrldmtpyte dflmgksdrk egfkevsdhs kdtesyeydl igvtvhtgta dgghyysfir
     2161 divnphaykn nkwylfndae vkpfdsaqla secfggemtt ktydsvtdkf mdfsfekths
     2221 aymlfykrme peeesgkeyk fdvssellew iwhdnmqflq dknifehtyf gfmwqlcsci
     2281 pstlpdpkav slmtaklsts fvletfihsk ekptmlqwie lltkqfnnsq aacewfldrm
     2341 adddwwpmqi likcpnqivr qmfqrlcihv iqrlrpvhah lylqpgmedg sddmdasved
     2401 iggrscvtrf vrtlllimeh gvkphskhlt eyfaflyefa kmgeeesqfl lslqaistmv
     2461 hfymgtkgpe npqvevlsee egeeeeeeed ilslaeekyr paalekmial vallveqsrs
     2521 erhltlsqtd maaltggkgf pflfqhirdg inirqtcnli fslcrynnrl aehivsmlft
     2581 siakltpeaa npffklltml mefaggppgm ppfasyilqr iwevieynps qcldwlavqt
     2641 prnklahswv lqnmenwver fllahnyprv rtsaayllvs lipsnsfrqm frstrslhip
     2701 trdlplspdt tvvlhqvynv llgllsrakl yvdaavhgtt klvpyfsfmt yclisktekl
     2761 mfstyfmdlw nlfqpklsep aiatnhnkqa llsfwynvca dcpenirliv qnpvvtknia
     2821 fnyiladhdd qdvvlfnrgm lpayygilrl cceqspaftr qlashqniqw afknltphas
     2881 qypgaveelf nlmqlfiaqr pdmreeeled ikqfkkttis cylrcldgrs cwttlisafr
     2941 illesdedrl lvvfnrglil mtesfntlhm myheatachv tgdlvellsi flsvlkstrp
     3001 ylqrkdvkqa liqwqerief ahklltllns ysppelrnac idvlkelvll sphdflhtlv
     3061 pflqhnhcty hhsnipmslg pyfpcrenik liggksnirp prpelnmcll ptmvetskgk
     3121 ddvydrmlld yffsyhqfih llcrvaince kftetlvkls vlvayeglpl hlalfpklwt
     3181 elcqtqsams kncikllced pvfaeyikci lmdertflnn nivytfmthf llkvqgqvfs
     3241 eancaslist litnlinqyq nlqsdftnrv eiskasaaln gdlralalll svhtpkqlnp
     3301 aliptlqell skcrtclqqr nslqeqeake rktkddegat pvkrrrvssd eehtvdscis
     3361 dmktetrevl tptstsdnet rdssiidpgt eqdlpspens svkeyrvevp ssfsedtsni
     3421 rsqhaeeqsn ngrfedckel kdlhcskdsn laeeesefps tslsavlsdl adlrscdgqa
     3481 lpsqdpeaal slscghsrgl fshmqqhdil dtlcrtiest ihvvtrisgk gnqaas
//
LOCUS       XP_061011210            3524 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin carboxyl-terminal hydrolase 34 isoform X2 [Dama dama].
ACCESSION   XP_061011210
VERSION     XP_061011210.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155227.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3524
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3524
                     /product="ubiquitin carboxyl-terminal hydrolase 34 isoform
                     X2"
                     /calculated_mol_wt=401068
     Region          1870..2219
                     /region_name="peptidase_C19C"
                     /note="A subfamily of Peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; cd02659"
                     /db_xref="CDD:239124"
     Site            order(1876,1881,2142,2166)
                     /site_type="active"
                     /db_xref="CDD:239124"
     Region          2337..2670
                     /region_name="DUF3517"
                     /note="Domain of unknown function (DUF3517); pfam12030"
                     /db_xref="CDD:463438"
     CDS             1..3524
                     /gene="USP34"
                     /coded_by="XM_061155227.1:16..10590"
                     /db_xref="GeneID:133064769"
ORIGIN      
        1 mdmnlvsdie ggdglqlrke htlkifayin swtqrqclcc fkeykhleif nqvvcalinl
       61 viaqvqvlrd qlckhcttin idstwqdesn qaeepqnier ecnegsterq ksiekksnss
      121 ricnlteees sknsdpfslw stdekeklll cvakifqiqf plytaykhnt hptiedistq
      181 esnilgafcd mndvevplhl lryvclfcgk nglslmkdcf eygtpetlpf liahafitvv
      241 sniriwlhip avmqhiipfr tyvirylckl sdqelrqsaa rnmadlmwst vkepldttlc
      301 fdkesldlaf kyfmsptltm rlaglsqitn qlhtfndvcn neslvsdtet siakeladwl
      361 isnnvvehif gpnlhieiik qcqvilnfla aegrlstqhi dciwaaaqlk hcsryihdlf
      421 psliknldpv plrhllnlvs alepsvhteq tlylasmlik alwnnalaak aqlskqssfa
      481 sllntnlpig nkkgspaasp qssdnsdthq sggsdiemde qlinrtkhvq qrlsdteesm
      541 qgssdetans gedgssgpgs ssghsdgssn evnsshasqs agspgselqs ediadiealk
      601 eededddhgh nppksscgtd lrnrklesqa giclgdsqgp sersgtnsgt gkdlvfntes
      661 mpsvdnrirm ldacshsedp ehdisgemna ahiaqasqes citrtgdflg eaignelfnc
      721 rqfigpqhhh hhhhhhhhdg hmvddmlsad dvscsssqvs akseknmadf dgeesgceee
      781 lvqinshael tshlqqhlpn lasiyhehls qgpavhkhqf nsnavtdinl dnvckkgntl
      841 lwdivqddda vnlsegline aekllcslvc wftdrqirmr fiegclenlg nnrsvvislr
      901 llpklfgtfq qfgssydthw itmwaekeln mmklffdnlv yyiqavregr qkhalyshsa
      961 evqvrlqflt cvfstlgspd hfrlsleqvd ilwhclveds ecyddalhwf lnqvrskdqh
     1021 amgmetykhl flekmpqlkp etismtglnl fqhlcnlarl atsaydggsn selcgmdqfw
     1081 gialraqsgd vsraaiqyin syyingktgl ekeqefiskc meslmiasss leqeshsslt
     1141 viergllmlk thleafrrrf ayhlrqwqie gtgisshlka lsdkqslplr vvcqpaglpd
     1201 kmtiemypsd qvadlraevt hwyenlqkeq isqqaqlqef gqssrkgefp gglmgpvrmi
     1261 ssghelttdy dekalhelgf kdmqmvfvsl gaprrerkge gvqlpasclp ppqkdnipml
     1321 lllqephltt lfdllemlas fkppsgkmav edseslrcee lhlhaenlsr rvwellmllp
     1381 tcpnmlmafq nisdeqsndg lnwkellkik sahkllyale iiealgkpnr rirrestgsy
     1441 sdlypdsdds sedqvenskn swsckfvaag glqqlleifn sgilepkeqe swtvwqldcl
     1501 acllklicqf avdpsdldla yhdvfawsgi aeshrkrtwp gksrkaagdh akglhiprlt
     1561 evflvlvqgt sliqrlmsva ytydnlaprv lkaqsdhrsr hevshysmwl lvswahccsl
     1621 vkssladsdh lqdwlkkltl lipetavrhe scnglyklsl sgldggdsin rsflllaast
     1681 llkflpdaqa lkpiriddye eepmlkpgck eyfwllcklv dnihikdasq ttlldldala
     1741 rhladcirsr eildhqdgni eddgltgllr latsvikhkp pfkfsregqe flrdifnllf
     1801 llpslkdrqq pkckshssra aaydllvemv kgsvenyrli hnwvmaqhmq shapykwdyw
     1861 phedvraecr fvgltnlgat cylastiqql ymipearqav ftakysedmk hkttllelqk
     1921 mftylmesec kaynprpfck tytmdkqpln tgeqkdmtef ftdlitkiee mspelkntvk
     1981 slfggvitnn vvsldcehvs qtaeefytvr cqvadmkniy esldevtikd tlegdnmytc
     2041 shcgkkvrae kracfkklpr ilsfntmryt fnmvtmmkek vnthfsfplr ldmtpytedf
     2101 lmgksdrkeg fkevsdhskd tesyeydlig vtvhtgtadg ghyysfirdi vnphayknnk
     2161 wylfndaevk pfdsaqlase cfggemttkt ydsvtdkfmd fsfekthsay mlfykrmepe
     2221 eesgkeykfd vssellewiw hdnmqflqdk nifehtyfgf mwqlcscips tlpdpkavsl
     2281 mtaklstsfv letfihskek ptmlqwiell tkqfnnsqaa cewfldrmad ddwwpmqili
     2341 kcpnqivrqm fqrlcihviq rlrpvhahly lqpgmedgsd dmdasvedig grscvtrfvr
     2401 tlllimehgv kphskhltey faflyefakm geeesqflls lqaistmvhf ymgtkgpenp
     2461 qvevlseeeg eeeeeeedil slaeekyrpa alekmialva llveqsrser hltlsqtdma
     2521 altggkgfpf lfqhirdgin irqtcnlifs lcrynnrlae hivsmlftsi akltpeaanp
     2581 ffklltmlme faggppgmpp fasyilqriw evieynpsqc ldwlavqtpr nklahswvlq
     2641 nmenwverfl lahnyprvrt saayllvsli psnsfrqmfr strslhiptr dlplspdttv
     2701 vlhqvynvll gllsraklyv daavhgttkl vpyfsfmtyc liskteklmf styfmdlwnl
     2761 fqpklsepai atnhnkqall sfwynvcadc penirlivqn pvvtkniafn yiladhddqd
     2821 vvlfnrgmlp ayygilrlcc eqspaftrql ashqniqwaf knltphasqy pgaveelfnl
     2881 mqlfiaqrpd mreeeledik qfkkttiscy lrcldgrscw ttlisafril lesdedrllv
     2941 vfnrglilmt esfntlhmmy heatachvtg dlvellsifl svlkstrpyl qrkdvkqali
     3001 qwqeriefah klltllnsys ppelrnacid vlkelvllsp hdflhtlvpf lqhnhctyhh
     3061 snipmslgpy fpcrenikli ggksnirppr pelnmcllpt mvetskgkdd vydrmlldyf
     3121 fsyhqfihll crvaincekf tetlvklsvl vayeglplhl alfpklwtel cqtqsamskn
     3181 cikllcedpv faeyikcilm dertflnnni vytfmthfll kvqgqvfsea ncaslistli
     3241 tnlinqyqnl qsdftnrvei skasaalngd lralalllsv htpkqlnpal iptlqellsk
     3301 crtclqqrns lqeqeakerk tkddegatpv krrrvssdee htvdscisdm ktetrevltp
     3361 tstsdnetrd ssiidpgteq dlpspenssv keyrvevpss fsedtsnirs qhaeeqsnng
     3421 rfedckelkd lhcskdsnla eeesefpsts lsavlsdlad lrscdgqalp sqdpeaalsl
     3481 scghsrglfs hmqqhdildt lcrtiestih vvtrisgkgn qaas
//
LOCUS       XP_061011211            3568 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin carboxyl-terminal hydrolase 34 isoform X3 [Dama dama].
ACCESSION   XP_061011211
VERSION     XP_061011211.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155228.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3568
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3568
                     /product="ubiquitin carboxyl-terminal hydrolase 34 isoform
                     X3"
                     /calculated_mol_wt=405861
     Region          1914..2263
                     /region_name="peptidase_C19C"
                     /note="A subfamily of Peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; cd02659"
                     /db_xref="CDD:239124"
     Site            order(1920,1925,2186,2210)
                     /site_type="active"
                     /db_xref="CDD:239124"
     Region          2381..2714
                     /region_name="DUF3517"
                     /note="Domain of unknown function (DUF3517); pfam12030"
                     /db_xref="CDD:463438"
     CDS             1..3568
                     /gene="USP34"
                     /coded_by="XM_061155228.1:103..10809"
                     /db_xref="GeneID:133064769"
ORIGIN      
        1 mrargpsrrl lrpdgksraq persikmaaa savaaasvsd ieggdglqlr kehtlkifay
       61 inswtqrqcl ccfkeykhle ifnqvvcali nlviaqvqvl rdqlckhctt inidstwqde
      121 snqaeepqni erecnegste rqksiekksn ssricnltee essknsdpfs lwstdekekl
      181 llcvakifqi qfplytaykh nthptiedis tqesnilgaf cdmndvevpl hllryvclfc
      241 gknglslmkd cfeygtpetl pfliahafit vvsniriwlh ipavmqhiip frtyvirylc
      301 klsdqelrqs aarnmadlmw stvkepldtt lcfdkesldl afkyfmsptl tmrlaglsqi
      361 tnqlhtfndv cnneslvsdt etsiakelad wlisnnvveh ifgpnlhiei ikqcqvilnf
      421 laaegrlstq hidciwaaaq lkhcsryihd lfpsliknld pvplrhllnl vsalepsvht
      481 eqtlylasml ikalwnnala akaqlskqss fasllntnlp ignkkeeeel rraapspwsp
      541 aaspqssdns dthqsggsdi emdeqlinrt khvqqrlsdt eesmqgssde tansgedgss
      601 gpgsssghsd gssnevnssh asqsagspgs elqsediadi ealkeededd dhghnppkss
      661 cgtdlrnrkl esqagiclgd sqgpsersgt nsgtgkdlvf ntesmpsvdn rirmldacsh
      721 sedpehdisg emnaahiaqa sqescitrtg dflgeaigne lfncrqfigp qhhhhhhhhh
      781 hhdghmvddm lsaddvscss sqvsaksekn madfdgeesg ceeelvqins haeltshlqq
      841 hlpnlasiyh ehlsqgpavh khqfnsnavt dinldnvckk gntllwdivq dddavnlseg
      901 lineaekllc slvcwftdrq irmrfiegcl enlgnnrsvv islrllpklf gtfqqfgssy
      961 dthwitmwae kelnmmklff dnlvyyiqav regrqkhaly shsaevqvrl qfltcvfstl
     1021 gspdhfrlsl eqvdilwhcl vedsecydda lhwflnqvrs kdqhamgmet ykhlflekmp
     1081 qlkpetismt glnlfqhlcn larlatsayd ggsnselcgm dqfwgialra qsgdvsraai
     1141 qyinsyying ktglekeqef iskcmeslmi asssleqesh ssltviergl lmlkthleaf
     1201 rrrfayhlrq wqiegtgiss hlkalsdkqs lplrvvcqpa glpdkmtiem ypsdqvadlr
     1261 aevthwyenl qkeqisqqaq lqefgqssrk gefpgglmgp vrmissghel ttdydekalh
     1321 elgfkdmqmv fvslgaprre rkgegvqlpa sclpppqkdn ipmllllqep hlttlfdlle
     1381 mlasfkppsg kmavedsesl rceelhlhae nlsrrvwell mllptcpnml mafqnisdeq
     1441 sndglnwkel lkiksahkll yaleiiealg kpnrrirres tgsysdlypd sddssedqve
     1501 nsknswsckf vaagglqqll eifnsgilep keqeswtvwq ldclacllkl icqfavdpsd
     1561 ldlayhdvfa wsgiaeshrk rtwpgksrka agdhakglhi prltevflvl vqgtsliqrl
     1621 msvaytydnl aprvlkaqsd hrsrhevshy smwllvswah ccslvkssla dsdhlqdwlk
     1681 kltllipeta vrhescngly klslsgldgg dsinrsflll aastllkflp daqalkpiri
     1741 ddyeeepmlk pgckeyfwll cklvdnihik dasqttlldl dalarhladc irsreildhq
     1801 dgnieddglt gllrlatsvi khkppfkfsr egqeflrdif nllfllpslk drqqpkcksh
     1861 ssraaaydll vemvkgsven yrlihnwvma qhmqshapyk wdywphedvr aecrfvgltn
     1921 lgatcylast iqqlymipea rqavftakys edmkhkttll elqkmftylm eseckaynpr
     1981 pfcktytmdk qplntgeqkd mtefftdlit kieemspelk ntvkslfggv itnnvvsldc
     2041 ehvsqtaeef ytvrcqvadm kniyesldev tikdtlegdn mytcshcgkk vraekracfk
     2101 klprilsfnt mrytfnmvtm mkekvnthfs fplrldmtpy tedflmgksd rkegfkevsd
     2161 hskdtesyey dligvtvhtg tadgghyysf irdivnphay knnkwylfnd aevkpfdsaq
     2221 lasecfggem ttktydsvtd kfmdfsfekt hsaymlfykr mepeeesgke ykfdvssell
     2281 ewiwhdnmqf lqdknifeht yfgfmwqlcs cipstlpdpk avslmtakls tsfvletfih
     2341 skekptmlqw ielltkqfnn sqaacewfld rmadddwwpm qilikcpnqi vrqmfqrlci
     2401 hviqrlrpvh ahlylqpgme dgsddmdasv ediggrscvt rfvrtlllim ehgvkphskh
     2461 lteyfaflye fakmgeeesq fllslqaist mvhfymgtkg penpqvevls eeegeeeeee
     2521 edilslaeek yrpaalekmi alvallveqs rserhltlsq tdmaaltggk gfpflfqhir
     2581 dginirqtcn lifslcrynn rlaehivsml ftsiakltpe aanpffkllt mlmefaggpp
     2641 gmppfasyil qriwevieyn psqcldwlav qtprnklahs wvlqnmenwv erfllahnyp
     2701 rvrtsaayll vslipsnsfr qmfrstrslh iptrdlplsp dttvvlhqvy nvllgllsra
     2761 klyvdaavhg ttklvpyfsf mtycliskte klmfstyfmd lwnlfqpkls epaiatnhnk
     2821 qallsfwynv cadcpenirl ivqnpvvtkn iafnyiladh ddqdvvlfnr gmlpayygil
     2881 rlcceqspaf trqlashqni qwafknltph asqypgavee lfnlmqlfia qrpdmreeel
     2941 edikqfkktt iscylrcldg rscwttlisa frillesded rllvvfnrgl ilmtesfntl
     3001 hmmyheatac hvtgdlvell siflsvlkst rpylqrkdvk qaliqwqeri efahklltll
     3061 nsysppelrn acidvlkelv llsphdflht lvpflqhnhc tyhhsnipms lgpyfpcren
     3121 ikliggksni rpprpelnmc llptmvetsk gkddvydrml ldyffsyhqf ihllcrvain
     3181 cekftetlvk lsvlvayegl plhlalfpkl wtelcqtqsa mskncikllc edpvfaeyik
     3241 cilmdertfl nnnivytfmt hfllkvqgqv fseancasli stlitnlinq yqnlqsdftn
     3301 rveiskasaa lngdlralal llsvhtpkql npaliptlqe llskcrtclq qrnslqeqea
     3361 kerktkddeg atpvkrrrvs sdeehtvdsc isdmktetre vltptstsdn etrdssiidp
     3421 gteqdlpspe nssvkeyrve vpssfsedts nirsqhaeeq snngrfedck elkdlhcskd
     3481 snlaeeesef pstslsavls dladlrscdg qalpsqdpea alslscghsr glfshmqqhd
     3541 ildtlcrtie stihvvtris gkgnqaas
//
LOCUS       XP_061011212            3510 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin carboxyl-terminal hydrolase 34 isoform X4 [Dama dama].
ACCESSION   XP_061011212
VERSION     XP_061011212.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155229.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3510
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3510
                     /product="ubiquitin carboxyl-terminal hydrolase 34 isoform
                     X4"
                     /calculated_mol_wt=399440
     Region          1856..2205
                     /region_name="peptidase_C19C"
                     /note="A subfamily of Peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; cd02659"
                     /db_xref="CDD:239124"
     Site            order(1862,1867,2128,2152)
                     /site_type="active"
                     /db_xref="CDD:239124"
     Region          2323..2656
                     /region_name="DUF3517"
                     /note="Domain of unknown function (DUF3517); pfam12030"
                     /db_xref="CDD:463438"
     CDS             1..3510
                     /gene="USP34"
                     /coded_by="XM_061155229.1:16..10548"
                     /db_xref="GeneID:133064769"
ORIGIN      
        1 mdmnlvsdie ggdglqlrke htlkifayin swtqrqclcc fkeykhleif nqvvcalinl
       61 viaqvqvlrd qlckhcttin idstwqdesn qaeepqnier ecnegsterq ksiekksnss
      121 ricnlteees sknsdpfslw stdekeklll cvakifqiqf plytaykhnt hptiedistq
      181 esnilgafcd mndvevplhl lryvclfcgk nglslmkdcf eygtpetlpf liahafitvv
      241 sniriwlhip avmqhiipfr tyvirylckl sdqelrqsaa rnmadlmwst vkepldttlc
      301 fdkesldlaf kyfmsptltm rlaglsqitn qlhtfndvcn neslvsdtet siakeladwl
      361 isnnvvehif gpnlhieiik qcqvilnfla aegrlstqhi dciwaaaqlk hcsryihdlf
      421 psliknldpv plrhllnlvs alepsvhteq tlylasmlik alwnnalaak aqlskqssfa
      481 sllntnlpig nkkeeeelrr aapspwspaa spqssdnsdt hqsggsdiem deqlinrtkh
      541 vqqrlsdtee smqgssdeta nsgedgssgp gsssghsdgs snevnsshas qsagspgsel
      601 qsediadiea lkeededddh ghnppksscg tdlrnrkles qagiclgdsq gpsersgtns
      661 gtgkdlvfnt esmpsvdnri rmldacshse dpehdisgem naahiaqasq escitrtgdf
      721 lgeaignelf ncrqfigpqh hhhhhhhhhh dghmvddmls addvscsssq vsakseknma
      781 dfdgeesgce eelvqinsha eltshlqqhl pnlasiyheh lsqgpavhkh qfnsnavtdi
      841 nldnvckkgn tllwdivqdd davnlsegli neaekllcsl vcwftdrqir mrfiegclen
      901 lgnnrsvvis lrllpklfgt fqqfgssydt hwitmwaeke lnmmklffdn lvyyiqavre
      961 grqkhalysh saevqvrlqf ltcvfstlgs pdhfrlsleq vdilwhclve dsecyddalh
     1021 wflnqvrskd qhamgmetyk hlflekmpql kpetismtgl nlfqhlcnla rlatsaydgg
     1081 snselcgmdq fwgialraqs gdvsraaiqy insyyingkt glekeqefis kcmeslmias
     1141 ssleqeshss ltviergllm lkthleafrr rfayhlrqwq iegtgisshl kalsdkqslp
     1201 lrvvcqpagl pdkkeqisqq aqlqefgqss rkgefpgglm gpvrmissgh elttdydeka
     1261 lhelgfkdmq mvfvslgapr rerkgegvql pasclpppqk dnipmllllq ephlttlfdl
     1321 lemlasfkpp sgkmavedse slrceelhlh aenlsrrvwe llmllptcpn mlmafqnisd
     1381 eqsndglnwk ellkiksahk llyaleiiea lgkpnrrirr estgsysdly pdsddssedq
     1441 vensknswsc kfvaagglqq lleifnsgil epkeqeswtv wqldclacll klicqfavdp
     1501 sdldlayhdv fawsgiaesh rkrtwpgksr kaagdhakgl hiprltevfl vlvqgtsliq
     1561 rlmsvaytyd nlaprvlkaq sdhrsrhevs hysmwllvsw ahccslvkss ladsdhlqdw
     1621 lkkltllipe tavrhescng lyklslsgld ggdsinrsfl llaastllkf lpdaqalkpi
     1681 riddyeeepm lkpgckeyfw llcklvdnih ikdasqttll dldalarhla dcirsreild
     1741 hqdgnieddg ltgllrlats vikhkppfkf sregqeflrd ifnllfllps lkdrqqpkck
     1801 shssraaayd llvemvkgsv enyrlihnwv maqhmqshap ykwdywphed vraecrfvgl
     1861 tnlgatcyla stiqqlymip earqavftak ysedmkhktt llelqkmfty lmeseckayn
     1921 prpfcktytm dkqplntgeq kdmtefftdl itkieemspe lkntvkslfg gvitnnvvsl
     1981 dcehvsqtae efytvrcqva dmkniyesld evtikdtleg dnmytcshcg kkvraekrac
     2041 fkklprilsf ntmrytfnmv tmmkekvnth fsfplrldmt pytedflmgk sdrkegfkev
     2101 sdhskdtesy eydligvtvh tgtadgghyy sfirdivnph ayknnkwylf ndaevkpfds
     2161 aqlasecfgg emttktydsv tdkfmdfsfe kthsaymlfy krmepeeesg keykfdvsse
     2221 llewiwhdnm qflqdknife htyfgfmwql cscipstlpd pkavslmtak lstsfvletf
     2281 ihskekptml qwielltkqf nnsqaacewf ldrmadddww pmqilikcpn qivrqmfqrl
     2341 cihviqrlrp vhahlylqpg medgsddmda svediggrsc vtrfvrtlll imehgvkphs
     2401 khlteyfafl yefakmgeee sqfllslqai stmvhfymgt kgpenpqvev lseeegeeee
     2461 eeedilslae ekyrpaalek mialvallve qsrserhltl sqtdmaaltg gkgfpflfqh
     2521 irdginirqt cnlifslcry nnrlaehivs mlftsiaklt peaanpffkl ltmlmefagg
     2581 ppgmppfasy ilqriwevie ynpsqcldwl avqtprnkla hswvlqnmen wverfllahn
     2641 yprvrtsaay llvslipsns frqmfrstrs lhiptrdlpl spdttvvlhq vynvllglls
     2701 raklyvdaav hgttklvpyf sfmtyclisk teklmfstyf mdlwnlfqpk lsepaiatnh
     2761 nkqallsfwy nvcadcpeni rlivqnpvvt kniafnyila dhddqdvvlf nrgmlpayyg
     2821 ilrlcceqsp aftrqlashq niqwafknlt phasqypgav eelfnlmqlf iaqrpdmree
     2881 eledikqfkk ttiscylrcl dgrscwttli safrillesd edrllvvfnr glilmtesfn
     2941 tlhmmyheat achvtgdlve llsiflsvlk strpylqrkd vkqaliqwqe riefahkllt
     3001 llnsysppel rnacidvlke lvllsphdfl htlvpflqhn hctyhhsnip mslgpyfpcr
     3061 enikliggks nirpprpeln mcllptmvet skgkddvydr mlldyffsyh qfihllcrva
     3121 incekftetl vklsvlvaye glplhlalfp klwtelcqtq samskncikl lcedpvfaey
     3181 ikcilmdert flnnnivytf mthfllkvqg qvfseancas listlitnli nqyqnlqsdf
     3241 tnrveiskas aalngdlral alllsvhtpk qlnpaliptl qellskcrtc lqqrnslqeq
     3301 eakerktkdd egatpvkrrr vssdeehtvd scisdmktet revltptsts dnetrdssii
     3361 dpgteqdlps penssvkeyr vevpssfsed tsnirsqhae eqsnngrfed ckelkdlhcs
     3421 kdsnlaeees efpstslsav lsdladlrsc dgqalpsqdp eaalslscgh srglfshmqq
     3481 hdildtlcrt iestihvvtr isgkgnqaas
//
LOCUS       XP_061011213            3545 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin carboxyl-terminal hydrolase 34 isoform X5 [Dama dama].
ACCESSION   XP_061011213
VERSION     XP_061011213.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155230.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3545
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3545
                     /product="ubiquitin carboxyl-terminal hydrolase 34 isoform
                     X5"
                     /calculated_mol_wt=403536
     Region          1891..2240
                     /region_name="peptidase_C19C"
                     /note="A subfamily of Peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; cd02659"
                     /db_xref="CDD:239124"
     Site            order(1897,1902,2163,2187)
                     /site_type="active"
                     /db_xref="CDD:239124"
     Region          2358..2691
                     /region_name="DUF3517"
                     /note="Domain of unknown function (DUF3517); pfam12030"
                     /db_xref="CDD:463438"
     CDS             1..3545
                     /gene="USP34"
                     /coded_by="XM_061155230.1:98..10735"
                     /db_xref="GeneID:133064769"
ORIGIN      
        1 mcencadlve vlneisdieg gdglqlrkeh tlkifayins wtqrqclccf keykhleifn
       61 qvvcalinlv iaqvqvlrdq lckhcttini dstwqdesnq aeepqniere cnegsterqk
      121 siekksnssr icnlteeess knsdpfslws tdekeklllc vakifqiqfp lytaykhnth
      181 ptiedistqe snilgafcdm ndvevplhll ryvclfcgkn glslmkdcfe ygtpetlpfl
      241 iahafitvvs niriwlhipa vmqhiipfrt yvirylckls dqelrqsaar nmadlmwstv
      301 kepldttlcf dkesldlafk yfmsptltmr laglsqitnq lhtfndvcnn eslvsdtets
      361 iakeladwli snnvvehifg pnlhieiikq cqvilnflaa egrlstqhid ciwaaaqlkh
      421 csryihdlfp sliknldpvp lrhllnlvsa lepsvhteqt lylasmlika lwnnalaaka
      481 qlskqssfas llntnlpign kkeeeelrra apspwspaas pqssdnsdth qsggsdiemd
      541 eqlinrtkhv qqrlsdtees mqgssdetan sgedgssgpg sssghsdgss nevnsshasq
      601 sagspgselq sediadieal keededddhg hnppksscgt dlrnrklesq agiclgdsqg
      661 psersgtnsg tgkdlvfnte smpsvdnrir mldacshsed pehdisgemn aahiaqasqe
      721 scitrtgdfl geaignelfn crqfigpqhh hhhhhhhhhd ghmvddmlsa ddvscsssqv
      781 sakseknmad fdgeesgcee elvqinshae ltshlqqhlp nlasiyhehl sqgpavhkhq
      841 fnsnavtdin ldnvckkgnt llwdivqddd avnlseglin eaekllcslv cwftdrqirm
      901 rfiegclenl gnnrsvvisl rllpklfgtf qqfgssydth witmwaekel nmmklffdnl
      961 vyyiqavreg rqkhalyshs aevqvrlqfl tcvfstlgsp dhfrlsleqv dilwhclved
     1021 secyddalhw flnqvrskdq hamgmetykh lflekmpqlk petismtgln lfqhlcnlar
     1081 latsaydggs nselcgmdqf wgialraqsg dvsraaiqyi nsyyingktg lekeqefisk
     1141 cmeslmiass sleqeshssl tviergllml kthleafrrr fayhlrqwqi egtgisshlk
     1201 alsdkqslpl rvvcqpaglp dkmtiemyps dqvadlraev thwyenlqke qisqqaqlqe
     1261 fgqssrkgef pgglmgpvrm issghelttd ydekalhelg fkdmqmvfvs lgaprrerkg
     1321 egvqlpascl pppqkdnipm llllqephlt tlfdllemla sfkppsgkma vedseslrce
     1381 elhlhaenls rrvwellmll ptcpnmlmaf qnisdeqsnd glnwkellki ksahkllyal
     1441 eiiealgkpn rrirrestgs ysdlypdsdd ssedqvensk nswsckfvaa gglqqlleif
     1501 nsgilepkeq eswtvwqldc lacllklicq favdpsdldl ayhdvfawsg iaeshrkrtw
     1561 pgksrkaagd hakglhiprl tevflvlvqg tsliqrlmsv aytydnlapr vlkaqsdhrs
     1621 rhevshysmw llvswahccs lvkssladsd hlqdwlkklt llipetavrh escnglykls
     1681 lsgldggdsi nrsflllaas tllkflpdaq alkpiriddy eeepmlkpgc keyfwllckl
     1741 vdnihikdas qttlldldal arhladcirs reildhqdgn ieddgltgll rlatsvikhk
     1801 ppfkfsregq eflrdifnll fllpslkdrq qpkckshssr aaaydllvem vkgsvenyrl
     1861 ihnwvmaqhm qshapykwdy wphedvraec rfvgltnlga tcylastiqq lymipearqa
     1921 vftakysedm khkttllelq kmftylmese ckaynprpfc ktytmdkqpl ntgeqkdmte
     1981 fftdlitkie emspelkntv kslfggvitn nvvsldcehv sqtaeefytv rcqvadmkni
     2041 yesldevtik dtlegdnmyt cshcgkkvra ekracfkklp rilsfntmry tfnmvtmmke
     2101 kvnthfsfpl rldmtpyted flmgksdrke gfkevsdhsk dtesyeydli gvtvhtgtad
     2161 gghyysfird ivnphayknn kwylfndaev kpfdsaqlas ecfggemttk tydsvtdkfm
     2221 dfsfekthsa ymlfykrmep eeesgkeykf dvssellewi whdnmqflqd knifehtyfg
     2281 fmwqlcscip stlpdpkavs lmtaklstsf vletfihske kptmlqwiel ltkqfnnsqa
     2341 acewfldrma dddwwpmqil ikcpnqivrq mfqrlcihvi qrlrpvhahl ylqpgmedgs
     2401 ddmdasvedi ggrscvtrfv rtlllimehg vkphskhlte yfaflyefak mgeeesqfll
     2461 slqaistmvh fymgtkgpen pqvevlseee geeeeeeedi lslaeekyrp aalekmialv
     2521 allveqsrse rhltlsqtdm aaltggkgfp flfqhirdgi nirqtcnlif slcrynnrla
     2581 ehivsmlfts iakltpeaan pffklltmlm efaggppgmp pfasyilqri wevieynpsq
     2641 cldwlavqtp rnklahswvl qnmenwverf llahnyprvr tsaayllvsl ipsnsfrqmf
     2701 rstrslhipt rdlplspdtt vvlhqvynvl lgllsrakly vdaavhgttk lvpyfsfmty
     2761 cliskteklm fstyfmdlwn lfqpklsepa iatnhnkqal lsfwynvcad cpenirlivq
     2821 npvvtkniaf nyiladhddq dvvlfnrgml payygilrlc ceqspaftrq lashqniqwa
     2881 fknltphasq ypgaveelfn lmqlfiaqrp dmreeeledi kqfkkttisc ylrcldgrsc
     2941 wttlisafri llesdedrll vvfnrglilm tesfntlhmm yheatachvt gdlvellsif
     3001 lsvlkstrpy lqrkdvkqal iqwqeriefa hklltllnsy sppelrnaci dvlkelvlls
     3061 phdflhtlvp flqhnhctyh hsnipmslgp yfpcrenikl iggksnirpp rpelnmcllp
     3121 tmvetskgkd dvydrmlldy ffsyhqfihl lcrvaincek ftetlvklsv lvayeglplh
     3181 lalfpklwte lcqtqsamsk ncikllcedp vfaeyikcil mdertflnnn ivytfmthfl
     3241 lkvqgqvfse ancaslistl itnlinqyqn lqsdftnrve iskasaalng dlralallls
     3301 vhtpkqlnpa liptlqells kcrtclqqrn slqeqeaker ktkddegatp vkrrrvssde
     3361 ehtvdscisd mktetrevlt ptstsdnetr dssiidpgte qdlpspenss vkeyrvevps
     3421 sfsedtsnir sqhaeeqsnn grfedckelk dlhcskdsnl aeeesefpst slsavlsdla
     3481 dlrscdgqal psqdpeaals lscghsrglf shmqqhdild tlcrtiesti hvvtrisgkg
     3541 nqaas
//
LOCUS       XP_061011214            3453 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin carboxyl-terminal hydrolase 34 isoform X6 [Dama dama].
ACCESSION   XP_061011214
VERSION     XP_061011214.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155231.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3453
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3453
                     /product="ubiquitin carboxyl-terminal hydrolase 34 isoform
                     X6"
                     /calculated_mol_wt=392880
     Region          1882..2231
                     /region_name="peptidase_C19C"
                     /note="A subfamily of Peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; cd02659"
                     /db_xref="CDD:239124"
     Site            order(1888,1893,2154,2178)
                     /site_type="active"
                     /db_xref="CDD:239124"
     Region          2349..2682
                     /region_name="DUF3517"
                     /note="Domain of unknown function (DUF3517); pfam12030"
                     /db_xref="CDD:463438"
     CDS             1..3453
                     /gene="USP34"
                     /coded_by="XM_061155231.1:16..10377"
                     /db_xref="GeneID:133064769"
ORIGIN      
        1 mdmnlvsdie ggdglqlrke htlkifayin swtqrqclcc fkeykhleif nqvvcalinl
       61 viaqvqvlrd qlckhcttin idstwqdesn qaeepqnier ecnegsterq ksiekksnss
      121 ricnlteees sknsdpfslw stdekeklll cvakifqiqf plytaykhnt hptiedistq
      181 esnilgafcd mndvevplhl lryvclfcgk nglslmkdcf eygtpetlpf liahafitvv
      241 sniriwlhip avmqhiipfr tyvirylckl sdqelrqsaa rnmadlmwst vkepldttlc
      301 fdkesldlaf kyfmsptltm rlaglsqitn qlhtfndvcn neslvsdtet siakeladwl
      361 isnnvvehif gpnlhieiik qcqvilnfla aegrlstqhi dciwaaaqlk hcsryihdlf
      421 psliknldpv plrhllnlvs alepsvhteq tlylasmlik alwnnalaak aqlskqssfa
      481 sllntnlpig nkkeeeelrr aapspwspaa spqssdnsdt hqsggsdiem deqlinrtkh
      541 vqqrlsdtee smqgssdeta nsgedgssgp gsssghsdgs snevnsshas qsagspgsel
      601 qsediadiea lkeededddh ghnppksscg tdlrnrkles qagiclgdsq gpsersgtns
      661 gtgkdlvfnt esmpsvdnri rmldacshse dpehdisgem naahiaqasq escitrtgdf
      721 lgeaignelf ncrqfigpqh hhhhhhhhhh dghmvddmls addvscsssq vsakseknma
      781 dfdgeesgce eelvqinsha eltshlqqhl pnlasiyheh lsqgpavhkh qfnsnavtdi
      841 nldnvckkgn tllwdivqdd davnlsegli neaekllcsl vcwftdrqir mrfiegclen
      901 lgnnrsvvis lrllpklfgt fqqfgssydt hwitmwaeke lnmmklffdn lvyyiqavre
      961 grqkhalysh saevqvrlqf ltcvfstlgs pdhfrlsleq vdilwhclve dsecyddalh
     1021 wflnqvrskd qhamgmetyk hlflekmpql kpetismtgl nlfqhlcnla rlatsaydgg
     1081 snselcgmdq fwgialraqs gdvsraaiqy insyyingkt glekeqefis kcmeslmias
     1141 ssleqeshss ltviergllm lkthleafrr rfayhlrqwq iegtgisshl kalsdkqslp
     1201 lrvvcqpagl pdkmtiemyp sdqvadlrae vthwyenlqk eqisqqaqlq efgqssrkge
     1261 fpgglmgpvr missgheltt dydekalhel gfkdmqmvfv slgaprrerk gegvqlpasc
     1321 lpppqkdnip mllllqephl ttlfdlleml asfkppsgkm avedseslrc eelhlhaenl
     1381 srrvwellml lptcpnmlma fqnisdeqsn dglnwkellk iksahkllya leiiealgkp
     1441 nrrirrestg sysdlypdsd dssedqvens knswsckfva agglqqllei fnsgilepke
     1501 qeswtvwqld clacllklic qfavdpsdld layhdvfaws giaeshrkrt wpgksrkaag
     1561 dhakglhipr ltevflvlvq gtsliqrlms vaytydnlap rvlkaqsdhr srhevshysm
     1621 wllvswahcc slvksslads dhlqdwlkkl tllipetavr hescnglykl slsgldggds
     1681 inrsflllaa stllkflpda qalkpiridd yeeepmlkpg ckeyfwllck lvdnihikda
     1741 sqttlldlda larhladcir sreildhqdg nieddgltgl lrlatsvikh kppfkfsreg
     1801 qeflrdifnl lfllpslkdr qqpkckshss raaaydllve mvkgsvenyr lihnwvmaqh
     1861 mqshapykwd ywphedvrae crfvgltnlg atcylastiq qlymipearq avftakysed
     1921 mkhkttllel qkmftylmes eckaynprpf cktytmdkqp lntgeqkdmt efftdlitki
     1981 eemspelknt vkslfggvit nnvvsldceh vsqtaeefyt vrcqvadmkn iyesldevti
     2041 kdtlegdnmy tcshcgkkvr aekracfkkl prilsfntmr ytfnmvtmmk ekvnthfsfp
     2101 lrldmtpyte dflmgksdrk egfkevsdhs kdtesyeydl igvtvhtgta dgghyysfir
     2161 divnphaykn nkwylfndae vkpfdsaqla secfggemtt ktydsvtdkf mdfsfekths
     2221 aymlfykrme peeesgkeyk fdvssellew iwhdnmqflq dknifehtyf gfmwqlcsci
     2281 pstlpdpkav slmtaklsts fvletfihsk ekptmlqwie lltkqfnnsq aacewfldrm
     2341 adddwwpmqi likcpnqivr qmfqrlcihv iqrlrpvhah lylqpgmedg sddmdasved
     2401 iggrscvtrf vrtlllimeh gvkphskhlt eyfaflyefa kmgeeesqfl lslqaistmv
     2461 hfymgtkgpe npqvevlsee egeeeeeeed ilslaeekyr paalekmial vallveqsrs
     2521 erhltlsqtd maaltggkgf pflfqhirdg inirqtcnli fslcrynnrl aehivsmlft
     2581 siakltpeaa npffklltml mefaggppgm ppfasyilqr iwevieynps qcldwlavqt
     2641 prnklahswv lqnmenwver fllahnyprv rtsaayllvs lipsnsfrqm frstrslhip
     2701 trdlplspdt tvvlhqvynv llgllsrakl yvdaavhgtt klvpyfsfmt yclisktekl
     2761 mfstyfmdlw nlfqpklsep aiatnhnkqa llsfwynvca dcpenirliv qnpvvtknia
     2821 fnyiladhdd qdvvlfnrgm lpayygilrl cceqspaftr qlashqniqw afknltphas
     2881 qypgaveelf nlmqlfiaqr pdmreeeled ikqfkkttis cylrcldgrs cwttlisafr
     2941 illesdedrl lvvfnrglil mtesfntlhm myheatachv tgdlvellsi flsvlkstrp
     3001 ylqrkdvkqa liqwqerief ahklltllns ysppelrnac idvlkelvll sphdflhtlv
     3061 pflqhnhcty hhsnipsvlv ayeglplhla lfpklwtelc qtqsamsknc ikllcedpvf
     3121 aeyikcilmd ertflnnniv ytfmthfllk vqgqvfsean caslistlit nlinqyqnlq
     3181 sdftnrveis kasaalngdl ralalllsvh tpkqlnpali ptlqellskc rtclqqrnsl
     3241 qeqeakerkt kddegatpvk rrrvssdeeh tvdscisdmk tetrevltpt stsdnetrds
     3301 siidpgteqd lpspenssvk eyrvevpssf sedtsnirsq haeeqsnngr fedckelkdl
     3361 hcskdsnlae eesefpstsl savlsdladl rscdgqalps qdpeaalsls cghsrglfsh
     3421 mqqhdildtl crtiestihv vtrisgkgnq aas
//
LOCUS       XP_061011215             332 aa            linear   MAM 02-DEC-2023
DEFINITION  activator of 90 kDa heat shock protein ATPase homolog 2 isoform X1
            [Dama dama].
ACCESSION   XP_061011215
VERSION     XP_061011215.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155232.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..332
                     /product="activator of 90 kDa heat shock protein ATPase
                     homolog 2 isoform X1"
                     /calculated_mol_wt=37589
     Region          29..158
                     /region_name="Aha1_N"
                     /note="Activator of Hsp90 ATPase, N-terminal; smart01000"
                     /db_xref="CDD:214964"
     Region          203..322
                     /region_name="SRPBCC_Aha1"
                     /note="Putative hydrophobic ligand-binding SRPBCC domain
                     of the Hsp90 co-chaperone Aha1 and related proteins;
                     cd08892"
                     /db_xref="CDD:176901"
     Site            order(203,205,207,216..218,220..221,226,234,242,244,246,
                     248,250,252..253,255,258,264,266..267,280..281,283,285,
                     295,297,299,301,305..313,316..318,321)
                     /site_type="other"
                     /note="putative hydrophobic ligand binding site [chemical
                     binding]"
                     /db_xref="CDD:176901"
     Site            order(255,267,280,290..291)
                     /site_type="other"
                     /note="putative Hsp90 binding residues [polypeptide
                     binding]"
                     /db_xref="CDD:176901"
     CDS             1..332
                     /gene="LOC133064770"
                     /coded_by="XM_061155232.1:127..1125"
                     /db_xref="GeneID:133064770"
ORIGIN      
        1 makwgqgdpr wiveeredgt nvnnwhwter datswskgrl rellvgitve neagrceise
       61 lkqvegeasc ssrkgkliff yewniklgwk giiresgvkh kglieipsls eenevddtev
      121 nvskkkgdgd ilkdlmktag takvrealgd ylkalkteft lgmilptkam aaqeltvkrk
      181 lsentlqass pvalgvript valrmtelfd tateqlyrif tvkdlvqkfs kspavleaek
      241 ggkfqmfdgn isgeytellt nkkivmkwrc rnwpeehyai valnfvptle qtelqldckg
      301 vpiceeenmk fcwqkqhfee ikgllqlttl ng
//
LOCUS       XP_061011216             308 aa            linear   MAM 02-DEC-2023
DEFINITION  activator of 90 kDa heat shock protein ATPase homolog 2 isoform X2
            [Dama dama].
ACCESSION   XP_061011216
VERSION     XP_061011216.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155233.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..308
                     /product="activator of 90 kDa heat shock protein ATPase
                     homolog 2 isoform X2"
                     /calculated_mol_wt=34643
     Region          5..134
                     /region_name="Aha1_N"
                     /note="Activator of Hsp90 ATPase, N-terminal; smart01000"
                     /db_xref="CDD:214964"
     Region          179..298
                     /region_name="SRPBCC_Aha1"
                     /note="Putative hydrophobic ligand-binding SRPBCC domain
                     of the Hsp90 co-chaperone Aha1 and related proteins;
                     cd08892"
                     /db_xref="CDD:176901"
     Site            order(179,181,183,192..194,196..197,202,210,218,220,222,
                     224,226,228..229,231,234,240,242..243,256..257,259,261,
                     271,273,275,277,281..289,292..294,297)
                     /site_type="other"
                     /note="putative hydrophobic ligand binding site [chemical
                     binding]"
                     /db_xref="CDD:176901"
     Site            order(231,243,256,266..267)
                     /site_type="other"
                     /note="putative Hsp90 binding residues [polypeptide
                     binding]"
                     /db_xref="CDD:176901"
     CDS             1..308
                     /gene="LOC133064770"
                     /coded_by="XM_061155233.1:237..1163"
                     /db_xref="GeneID:133064770"
ORIGIN      
        1 mclterdats wskgrlrell vgitveneag rceiselkqv egeascssrk gkliffyewn
       61 iklgwkgiir esgvkhkgli eipslseene vddtevnvsk kkgdgdilkd lmktagtakv
      121 realgdylka lkteftlgmi lptkamaaqe ltvkrklsen tlqasspval gvriptvalr
      181 mtelfdtate qlyriftvkd lvqkfskspa vleaekggkf qmfdgnisge ytelltnkki
      241 vmkwrcrnwp eehyaivaln fvptleqtel qldckgvpic eeenmkfcwq kqhfeeikgl
      301 lqlttlng
//
LOCUS       XP_061011217             334 aa            linear   MAM 02-DEC-2023
DEFINITION  methionine adenosyltransferase 2 subunit beta-like [Dama dama].
ACCESSION   XP_061011217
VERSION     XP_061011217.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155234.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..334
                     /product="methionine adenosyltransferase 2 subunit
                     beta-like"
                     /calculated_mol_wt=37596
     Region          30..316
                     /region_name="dTDP_HR_like_SDR_e"
                     /note="dTDP-6-deoxy-L-lyxo-4-hexulose reductase and
                     related proteins, extended (e) SDRs; cd05254"
                     /db_xref="CDD:187564"
     Site            order(35,37..40,59..60,70..73,93..95,97,112,134..136,159,
                     163,182..185)
                     /site_type="other"
                     /note="NADP binding site [chemical binding]"
                     /db_xref="CDD:187564"
     Site            order(113,136,159,163)
                     /site_type="active"
                     /db_xref="CDD:187564"
     Site            order(136,159,184,200,213,219)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:187564"
     CDS             1..334
                     /gene="LOC133064773"
                     /coded_by="XM_061155234.1:68..1072"
                     /db_xref="GeneID:133064773"
ORIGIN      
        1 mvgrekelsi hfvpgdcrlv eeevnipsrr vlitgatgll gravykefqq nnwhavgcgf
       61 rrarpkfeqv slldsnavhh iiydfqphvi vhcaaerrpd vvenhpdaas qlnvnasgnl
      121 akeaaaigaf liyissdyvf dgtnpryree dipnplnlyg ktklegekav lennlgaavl
      181 ripvlygeve rleesavtim fdkvqfsnks anmdhwqqrf pthvkdvatv crqlaekrml
      241 dpsikgnfhr sgneqmtkye macaiadafn lpsshlrpit dspvvgaqrp rnaqldcskl
      301 etlgigqrtp frigikeslw pflidkrwrq tvfh
//
LOCUS       XP_061011218             346 aa            linear   MAM 02-DEC-2023
DEFINITION  succinate--CoA ligase [ADP/GDP-forming] subunit alpha,
            mitochondrial [Dama dama].
ACCESSION   XP_061011218
VERSION     XP_061011218.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155235.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..346
                     /product="succinate--CoA ligase [ADP/GDP-forming] subunit
                     alpha, mitochondrial"
                     /calculated_mol_wt=35972
     Region          19..344
                     /region_name="PTZ00187"
                     /note="succinyl-CoA synthetase alpha subunit; Provisional"
                     /db_xref="CDD:240307"
     CDS             1..346
                     /gene="SUCLG1"
                     /coded_by="XM_061155235.1:50..1090"
                     /db_xref="GeneID:133064774"
ORIGIN      
        1 mtaalaaara aatmasgssg laaarllsra fllqqngirh csyttsrkhl yvdkntkiic
       61 qgftgkqgtf hsqqaleygt klvggttpgk ggkthlglpv fntvkeakeq tgatasviyv
      121 pppfaaaaid eaieaevplv vcitegipqq dmvrvkhkll rqgktrlvgp ncpgvinpge
      181 ckigimpghi hkkgrvgivs rsgtltyeav hqttqvglgq slcvgiggdp fngtdftdcl
      241 eiflndpate giiligeigg naeenaaefl kqhnsgpkak pvvsfiaglt appgrrmgha
      301 gaiiaggkgg akekiaalqs agvvvsmspa qlgttiykef ekrkml
//
LOCUS       XP_061011219            4153 aa            linear   MAM 02-DEC-2023
DEFINITION  dynein axonemal heavy chain 6 [Dama dama].
ACCESSION   XP_061011219
VERSION     XP_061011219.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155236.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4153
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..4153
                     /product="dynein axonemal heavy chain 6"
                     /calculated_mol_wt=475312
     Region          874..1294
                     /region_name="DHC_N2"
                     /note="Dynein heavy chain, N-terminal region 2; pfam08393"
                     /db_xref="CDD:462462"
     Region          <1114..3771
                     /region_name="DYN1"
                     /note="Dynein, heavy chain [Cytoskeleton]; COG5245"
                     /db_xref="CDD:227570"
     Region          1429..1755
                     /region_name="AAA_6"
                     /note="Hydrolytic ATP binding site of dynein motor region;
                     pfam12774"
                     /db_xref="CDD:463697"
     Region          3824..4149
                     /region_name="Dynein_C"
                     /note="Dynein heavy chain C-terminal domain; pfam18199"
                     /db_xref="CDD:465677"
     CDS             1..4153
                     /gene="DNAH6"
                     /coded_by="XM_061155236.1:1..12462"
                     /db_xref="GeneID:133064775"
ORIGIN      
        1 mafrlsenel dlksigelse npmltrlnsi rtrgrlsfvt ptenqgdtqf ltfehttkaq
       61 ertrkrqqpi kleplpvlkv hqdhkmpdyi yeqnrnrlia sgvlkppksp ekkastkslv
      121 qflehgeavk kkkqiqwpsv dsspspakls rtstgrrgly etssltypky yfhdreevik
      181 anirdplqiv kiihenehig flymisavpr ssieydtynl kvvnyenink ndyytiskka
      241 vthvynndie fieidrweqe ylyhreltki pifslfrkwk afnvwkknvr skkisgcrks
      301 lqkdlfivnh ylrpallkin elcyqlsfmg lcsiekchty tlqefkaaqv vrlaevterl
      361 eefrneakdv vrkacrvalr aagfipddca ressegpfkm pesgslielp tgdsdkmtyt
      421 eqaskrhhcm rltcfirlnd ylientmhvl tvnsasslln yltdklkrtp sadviqkwit
      481 eekpevtdkk gapvlekqee deslipmflt eltltvqsll fepsledfld gisgainhsq
      541 ntvlsvpnlv pdsyfdafts pyinnkreek tcgfgpslsa vfdddknfht iifqikeaiq
      601 aafesaqfya atfekfriff kenesldlea lklqepgvnf fseqlekyhr qhkdavalrp
      661 trnvglllid tkqlkeklip splrclevln ymlprlskkk vdaiiseaqd aeyklefvpt
      721 ttieyvnslv fldeiqerie sleeegnvvv qmyklieqyq vptppedfav fatmkpslva
      781 vrnaidksvg dretsikqfc lhlgrdledl snevnevkll aqdpqildin adqekikvml
      841 nelllvlddl qkrafqyksy qknfkvevsk fdaleevsae lklkqllwds lsewdqlqqe
      901 wlkskfdsld peflngqvsk yakfvtqlek glppnsvvpq lkskvekmke klpvimdlrn
      961 ptlkprhwaa ieqtvdatlv dlevpltlek laelhvfdfg qeiqdisgqa sgeaaletil
     1021 kkvedswktt efvvlphrds kdvfilggtd diqvllddst iniatiassr yvgplksrvd
     1081 ewqkqlalfn qtleewlncq rnwlylesif napdiqrqlp aeakmflqvd kswkeimrkv
     1141 nrlpnalraa tqpglletfq nnnalldqiq kcleaylesk rvifprfyfl sndelleila
     1201 qtrnpqavqp hlrkcfdsis klefallppt egkipgmdge pekvytndil amlspegerv
     1261 slgkglkarg nveewlgkve eamftslrrl skaaiadylg kqrtvwvvag hpsqviltvs
     1321 qimwcrdlte clekeegnhl ealedfekvn ferlnalaai vrgtlpklhr niitalitid
     1381 vhardivtel vqakvevvds fdwqrqlryy wdvdldncva rmalsqytyg yeylgacprl
     1441 vitpltdrcy lclmgalqld lggapagpag tgktettkdl akalaiqcvv fncsdgldyk
     1501 mmgrffsgla qsgawccfde fnridievls viaqqlitir nakaaklsrf mfegreiklv
     1561 mtcaafitmn pgyagrtelp dnlkalfrpf ammvpnyali aevilysegf esskilarkm
     1621 tqmyklcseq lsqqdhydfg mravksvlvm agslkrenpd lsedvvlira lrdsnlpkfl
     1681 tddailfsgi isdlfpgvqi pehdygilqs tiidvmkkkn lqpeacmvkk viqfyetmlv
     1741 rhgvmlvgpt gggkttvyqv laetlgnlqk lgvenpfyqp vktyvlnpks itmgelygev
     1801 nnitlewkdg lmalsvraav ndtsedhkwi vsdgpvdalw ienmntvldd nkmlclanse
     1861 rikltpqihm lfevqdlkva spatvsrcgm vfvdpeelkw mpyvktwmqs vskklseetq
     1921 eyilnlfqry vddglnfink kchqaipqvd iskvttlccl leslilekeg vnltmeqskl
     1981 ntvlcqtfvf cylwslggnl tenhwdsfdt firtqfddnp darlpssgdl wsihmdfdtk
     2041 rldpweriip tfkysrdtpf femlvptadt vrfgylmekl lavkhsvlft gitgvgksvi
     2101 akgllnriqe sagyvpvyln fsaqtsssrt qeiieskler krknilgapg nkrvvifvdd
     2161 lnmprldryg sqppiellrq yqdfggfydr nklfwkdiqd vtivsacapp gggrnpvtpr
     2221 firhfsmlcl pmpsehslkq ifqailngfl sdftpavkqs asniveasve iynrmsvdll
     2281 ptpakshyvf nlrdlskcvq gilqcdpgti reeiqifrlf checqrvfhd rlinnedkhy
     2341 fhailteman khfgiaigle yfltrpiifg dfikfgadks driyddmpdm ekianvlqdy
     2401 lddynlinpk evklvffqda iehvsriarm irqergnall vgvggtgkqs ltrlaahicg
     2461 yrclqielsr gynydsfhed lrklyklagv edknmvflft dtqivveefl edinnilnsg
     2521 evpnlfekde leqvlaatrp rakevgiseg nrdevfqyfi srvrqklhiv lcmspvgeaf
     2581 rsrcrmfpsl vncctidwfv qwpreallsv sktffsnvda vneelkekls lmcvnvhlsv
     2641 snmaeryyae lrrryyttpt sylelinlyl smltekrkql vsarervkng ltklletnvl
     2701 vdkmkldlsa lepvlltksq dvealmdkla edqenadqvr svvqedeaia kvkaeetqai
     2761 addaqrdlee alpaleaanr aldsldkadi seirvftkpp dmvmtvmeai sillnakpdw
     2821 ptakqllgds nflrrlfeyd kenikpqila klqkyinnpd fvpekvekvs kacksmcmwv
     2881 ramdlysrvv kevepkrqkl raaqaeldit matlrekqal lrqveeqiqa lqdeydkgvn
     2941 ekeslaktma ltkarlvrag kltaalgdeq vrweesiqkf neeisnivgn vfiaaacvay
     3001 ygaftaqyrq llieywiqdc qsleipinpd fslintlgdp yeirqwntdg lprdlisten
     3061 gilvtqgrrw plmidpqdqa nrwirnkesk nglkiikltd snflrtlena irlglpvlle
     3121 elretldpal epillkqtfi sggrllirlg dsdidydknf kfymttklpn phylpevcik
     3181 vtiinftvtk sgledqllsd vvrlerpele eqriklivri ntdknqlkai eekilkmlft
     3241 segnildnee lidtlqdski tsgaikirlk eaestermin iarekyrpva tqgsvmyfvi
     3301 aslseidpmy qyslkyfkql fnttietsvr iddlqqrmei lleqtlltay vnvsrglfeq
     3361 hkliysfmlc veimrqqgrl teaewnfflr gsaglekerp pkpefpwlvt amwfaccdle
     3421 elfpvfkglt qyivlypisv rigsfetyin ppdgdaysiv kesdqlitme rvpssynfwh
     3481 pelssfqkli likcckeekv vfaltdfvie nlgkafietp pvdlptlyqd msyntplvfi
     3541 lstgsdpmga fqrfaresgy servqsislg qgqgpiaerm ikdamksgnw vflqnchlav
     3601 swmlameeli ktftdsnvvi kdtfrlflss mpsntfpvtv lqnsvkvtne ppkglranir
     3661 raftemmpsf feenilgrkw rqiifgicff haiiqerkkf gplgwnicye fndsdrecal
     3721 lnlnlycqeg kipwdaliyi tgeityggrv tdtwdqrclr tvlkrffspe tlqdgykyse
     3781 sgiyfaplad slqefkdyie nlpliddpei fgmhenanlv yqyketstli ntildvqprs
     3841 ssggegksnd eivqelvasv qtrvpeilem enaseslfvk dpqgrlnslt tvlgqevdrf
     3901 nnllklihts ldtlnkaiag lvvmseemek vynsflnnqv pslwsntayp slkplgswvk
     3961 dlilrtafvd lwlkrgqpks fwisgfffpq gfltgtlqnh arkynlpide lsfkynmvpv
     4021 yrdqatviea aktvqfgqel pmdtelpspe dgvlvhgmfm dasrwdnkdm viedalpgqm
     4081 npmlpvvhfe prqnyepspt lyhsplyktg aragtlsttg hstnfvvtil lpskrskdyw
     4141 iakgsallcq lne
//
LOCUS       XP_061011220             162 aa            linear   MAM 02-DEC-2023
DEFINITION  metalloprotease TIKI1 [Dama dama].
ACCESSION   XP_061011220
VERSION     XP_061011220.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155237.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..162
                     /product="metalloprotease TIKI1"
                     /calculated_mol_wt=17460
     CDS             1..162
                     /gene="TRABD2A"
                     /coded_by="XM_061155237.1:43..531"
                     /db_xref="GeneID:133064776"
ORIGIN      
        1 msgpvcqmgr ierarrsgen immahegktk lrkwsllspg gfqttaspaf lnfhiiclce
       61 vlslkgagra sccgtflrsl alplqkpias sailatevpa pealvpeags mgrslslphl
      121 slsrsahlpg iapgkfqkkw rrpqqtqglg qfsdqwvrle ek
//
LOCUS       XP_061011221             260 aa            linear   MAM 02-DEC-2023
DEFINITION  heterogeneous nuclear ribonucleoproteins C1/C2-like [Dama dama].
ACCESSION   XP_061011221
VERSION     XP_061011221.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155238.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..260
                     /product="heterogeneous nuclear ribonucleoproteins
                     C1/C2-like"
                     /calculated_mol_wt=28493
     Region          10..93
                     /region_name="RRM_hnRNPC"
                     /note="RNA recognition motif (RRM) found in vertebrate
                     heterogeneous nuclear ribonucleoprotein C1/C2 (hnRNP
                     C1/C2); cd12603"
                     /db_xref="CDD:410015"
     CDS             1..260
                     /gene="LOC133064778"
                     /coded_by="XM_061155238.1:164..946"
                     /db_xref="GeneID:133064778"
ORIGIN      
        1 masnvtnktd prsmnsrvfi gnlntlvvkk sdveaifsky gkivgcsvqk gfafvqyvne
       61 rnaraavage dgrmiagqvl dinlaaepkv nrgkagvkrs aaemygssfd ldydfqrdyy
      121 drmysyparv ppppsiarav vpskrqrvsg ntsrrgkngf nsksgqrgps sksgklkgdd
      181 lqtikkeltq ikqkvdslle slekiekeqs kqgvemkndk seeeqssssl kkdetnvkme
      241 seggaddsae egdllddddn
//
LOCUS       XP_061011222              42 aa            linear   MAM 02-DEC-2023
DEFINITION  thymosin beta-10 [Dama dama].
ACCESSION   XP_061011222
VERSION     XP_061011222.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155239.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..42
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..42
                     /product="thymosin beta-10"
                     /calculated_mol_wt=4692
     Region          3..41
                     /region_name="Thymosin"
                     /note="Thymosin beta-4 family; pfam01290"
                     /db_xref="CDD:396038"
     CDS             1..42
                     /gene="TMSB10"
                     /coded_by="XM_061155239.1:170..298"
                     /db_xref="GeneID:133064780"
ORIGIN      
        1 madkpdmgei nsfdkaklkk tetqekntlp tketieqekq ak
//
LOCUS       XP_061011223             381 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase KCMF1 [Dama dama].
ACCESSION   XP_061011223
VERSION     XP_061011223.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155240.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..381
                     /product="E3 ubiquitin-protein ligase KCMF1"
                     /calculated_mol_wt=41816
     Region          7..55
                     /region_name="ZZ_PCMF_like"
                     /note="Zinc finger, ZZ type. Zinc finger present in
                     potassium channel modulatory factor (PCMF) 1 and related
                     proteins. The ZZ motif coordinates two zinc ions and most
                     likely participates in ligand binding or molecular
                     scaffolding. Human potassium channel...; cd02338"
                     /db_xref="CDD:239078"
     Site            order(9,12,24,27,33,36,46,50)
                     /site_type="other"
                     /note="Zinc-binding sites [ion binding]"
                     /db_xref="CDD:239078"
     Site            order(9,12,33,36)
                     /site_type="other"
                     /note="zinc cluster 1 [ion binding]"
                     /db_xref="CDD:239078"
     Site            order(10,21,23,29,31)
                     /site_type="active"
                     /note="putative charged binding surface [active]"
                     /db_xref="CDD:239078"
     Site            order(22,37,52,55)
                     /site_type="active"
                     /note="putative hydrophobic binding surface [active]"
                     /db_xref="CDD:239078"
     Site            order(24,27,46,50)
                     /site_type="other"
                     /note="zinc cluster 2 [ion binding]"
                     /db_xref="CDD:239078"
     Region          76..137
                     /region_name="zf-Di19"
                     /note="Drought induced 19 protein (Di19), zinc-binding;
                     pfam05605"
                     /db_xref="CDD:428539"
     CDS             1..381
                     /gene="KCMF1"
                     /coded_by="XM_061155240.1:134..1279"
                     /db_xref="GeneID:133064782"
ORIGIN      
        1 msrhegvscd aclkgnfrgr rykclicydy dlcascyesg atttrhttdh pmqciltrvd
       61 fdlyyggeaf sveqpqsftc pycgkmgyte tslqehvtse haetstevic picaalpggd
      121 pnhvtddfaa hltlehrapr dldessgvrh vrrmfhpgrg lggprarrsn mhftssstgg
      181 lsssqssysp snreamdpia ellsqlsgvr rsaggqlnss gpsasqlqql qmqlqlerqh
      241 aqaarqqlet arnatrrtnt ssvtttitqs tattntante ssqqtiqnsq flltrlndpk
      301 mseterqsme seradrslfv qelllstlvr eessssdede rgemadfgam gcvdimpldv
      361 alenlnlkes nkgneppppp l
//
LOCUS       XP_061011224             586 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor 7-like 1 [Dama dama].
ACCESSION   XP_061011224
VERSION     XP_061011224.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155241.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..586
                     /product="transcription factor 7-like 1"
                     /calculated_mol_wt=62323
     Region          27..247
                     /region_name="CTNNB1_binding"
                     /note="N-terminal CTNNB1 binding; pfam08347"
                     /db_xref="CDD:462440"
     Region          342..417
                     /region_name="HMG-box_TCF7-like"
                     /note="high mobility group (HMG)-box found in the
                     transcription factor 7 (TCF-7)-like family; cd21996"
                     /db_xref="CDD:438812"
     CDS             1..586
                     /gene="TCF7L1"
                     /coded_by="XM_061155241.1:3..1763"
                     /db_xref="GeneID:133064785"
ORIGIN      
        1 mpqlgggggg sgggsggsga gaagggddlg andelipfqd eggeeqepss dsasaqrdld
       61 evksslvnes enqssssdse aerrpqpard afqkprdyfa evrrpqdgaf fkgppypgyp
      121 flmipdlssp ylpngplspg gartylqmkw plldvpasat vkdarspspa hlsnkvpvvq
      181 hphhmhpltp litysndhfs pgsppthlsp eidpktgipr pphpselspy yplspgavgq
      241 iphplswlvp qqgqpmyslp pggfrhpypa lamnasmssl vssrfsphmv apahpglpts
      301 giphpaivsp ivkqepapps lspavsaksp vtvkkeeekk phvkkplnaf mlymkemrak
      361 vvaectlkes aainqilgrk whnlsreeqa kyyelarker qlhsqlyptw sardnygkkk
      421 krkrekqlsq tqsqqqqvqe adgalasksk kpcvqylppe kpcdspassh gsmldspatp
      481 saalaspaap aathseqaqp lslttkpetr aqlalhsaaf lsskaaatss gqmgsqapll
      541 srplplgsvp talltsppsf patlhahqal pvlqaqplsl vtksah
//
LOCUS       XP_061011225             609 aa            linear   MAM 02-DEC-2023
DEFINITION  all-trans-retinol 13,14-reductase isoform X1 [Dama dama].
ACCESSION   XP_061011225
VERSION     XP_061011225.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155242.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..609
                     /product="all-trans-retinol 13,14-reductase isoform X1"
                     /calculated_mol_wt=66468
     Region          68..589
                     /region_name="COG1233"
                     /note="Phytoene dehydrogenase-related protein [Secondary
                     metabolites biosynthesis, transport and catabolism]"
                     /db_xref="CDD:440846"
     CDS             1..609
                     /gene="RETSAT"
                     /coded_by="XM_061155242.1:106..1935"
                     /db_xref="GeneID:133064787"
ORIGIN      
        1 mwvsllllaa lllvilgkvy kglfsgsspn pfledvkrpp aplvtdkear kkvlkqafsv
       61 nrvpekldvv vigsgfggla aaailaktgk rvlvleqhtk aggcchtfgk nglefdtgih
      121 yvgrmqedss grfildqite gqldwvalps pfdimvlegp dgrkefpmya gmkayiqglk
      181 dkfpqeeaai dkymklvkvv scgvihgill kilplpvaql ltkyglltrf spflrastqs
      241 laevlrqlpa spelqavlsy ifptygvtps httfsmhall vdhylkgafy prggsseiaf
      301 htipviqrag gavltrapvq silldsagka ygvtvkkged lvniycpivi sdaglfntye
      361 rllpeqarcl pgvkrqlgmv rpglsmvsvf iclrgtkkdl glptsnyyiy fdkdmdkame
      421 hyvslpgdka athmpvlfic fpsakdptwe drypdrsaai vlvpasyewf kewqdepqgk
      481 rssayetlks sfveaamsvf lkqfphlegk vdsvtggspl snqfylaapq gacygadhdl
      541 grlhpgtmas mraqspipnl yltgqdiatc glagalqgal lcssailkrn lysdlqklgs
      601 riqaqkkkn
//
LOCUS       XP_061011226             591 aa            linear   MAM 02-DEC-2023
DEFINITION  all-trans-retinol 13,14-reductase isoform X2 [Dama dama].
ACCESSION   XP_061011226
VERSION     XP_061011226.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155243.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..591
                     /product="all-trans-retinol 13,14-reductase isoform X2"
                     /calculated_mol_wt=64534
     Region          68..571
                     /region_name="COG1233"
                     /note="Phytoene dehydrogenase-related protein [Secondary
                     metabolites biosynthesis, transport and catabolism]"
                     /db_xref="CDD:440846"
     CDS             1..591
                     /gene="RETSAT"
                     /coded_by="XM_061155243.1:109..1884"
                     /db_xref="GeneID:133064787"
ORIGIN      
        1 mwvsllllaa lllvilgkvy kglfsgsspn pfledvkrpp aplvtdkear kkvlkqafsv
       61 nrvpekldvv vigsgfggla aaailaktgk rvlvleqhtk aggcchtfgk nglefdtgih
      121 yvgrmqedss grfildqite gqldwvalps pfdimvlegp dgrkefpmya gmkayiqglk
      181 dkfpqeeaai dkymklvkvv scgvihgill kilplpvaql ltkyglltrf spflrastqs
      241 laevlrqlpa spelqavlsy ifptygvtps httfsmhall vdhylkgafy prggsseiaf
      301 htipviqrag gavltrapvq silldsagka ygvtvkkged lvniycpivi sdaglfntye
      361 rllpeqarcl pgvkrqlgmv rpglsmvsvf iclrgtkkdl glptsnyyiy fdkdmdkame
      421 hyvslpgdka athmpvlfic fpsakdptwe drypdrsaai vlvpasyewf kewqdepqgk
      481 rssayetlks sfveaamsvf lkqfphlegk vdsvtggspl snqfylaapq gacygadhdl
      541 grlhpgqdia tcglagalqg allcssailk rnlysdlqkl gsriqaqkkk n
//
LOCUS       XP_061011227             500 aa            linear   MAM 02-DEC-2023
DEFINITION  all-trans-retinol 13,14-reductase isoform X3 [Dama dama].
ACCESSION   XP_061011227
VERSION     XP_061011227.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155244.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..500
                     /product="all-trans-retinol 13,14-reductase isoform X3"
                     /calculated_mol_wt=54534
     Region          68..>449
                     /region_name="COG1233"
                     /note="Phytoene dehydrogenase-related protein [Secondary
                     metabolites biosynthesis, transport and catabolism]"
                     /db_xref="CDD:440846"
     CDS             1..500
                     /gene="RETSAT"
                     /coded_by="XM_061155244.1:109..1611"
                     /db_xref="GeneID:133064787"
ORIGIN      
        1 mwvsllllaa lllvilgkvy kglfsgsspn pfledvkrpp aplvtdkear kkvlkqafsv
       61 nrvpekldvv vigsgfggla aaailaktgk rvlvleqhtk aggcchtfgk nglefdtgih
      121 yvgrmqedss grfildqite gqldwvalps pfdimvlegp dgrkefpmya gmkayiqglk
      181 dkfpqeeaai dkymklvkvv scgvihgill kilplpvaql ltkyglltrf spflrastqs
      241 laevlrqlpa spelqavlsy ifptygvtps httfsmhall vdhylkgafy prggsseiaf
      301 htipviqrag gavltrapvq silldsagka ygvtvkkged lvniycpivi sdaglfntye
      361 rllpeqarcl pgvkrqlgmv rpglsmvsvf iclrgtkkdl glptsnyyiy fdkdmdkame
      421 hyvslpgdka athmpvlfic fpsakdptwe drypgqdiat cglagalqga llcssailkr
      481 nlysdlqklg sriqaqkkkn
//
LOCUS       XP_061011228             403 aa            linear   MAM 02-DEC-2023
DEFINITION  ELMO domain-containing protein 3 isoform X1 [Dama dama].
ACCESSION   XP_061011228
VERSION     XP_061011228.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155245.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..403
                     /product="ELMO domain-containing protein 3 isoform X1"
                     /calculated_mol_wt=44796
     Region          154..>215
                     /region_name="ELMO_CED12"
                     /note="ELMO/CED-12 family; pfam04727"
                     /db_xref="CDD:461411"
     CDS             1..403
                     /gene="ELMOD3"
                     /coded_by="XM_061155245.1:879..2090"
                     /db_xref="GeneID:133064788"
ORIGIN      
        1 mnenshsfhe kerrdgqvgs vsagcapppd kdgsavlafr gisiselknh svlqaltaea
       61 ngwepgvvnt evlqaqeewe avdsihpetg srasmdqpgq lisfsealqh fqtvdlssfk
      121 kriqptirrt glaalrhclf gppklhqglr eerdlvltia qcgldsqdpm hgrvlqtiyk
      181 kltgskfdca lhgdhwedlg fqgtnpatdl rgagflallh llylvmdskt llmareilrl
      241 srhhiqclkt slqalmnlen tvfqearrqp qeqlrdtalp aaspnfgltf dtpltakskg
      301 nqrpnseaet taaipllfdv ceyhayrhpg lkggvslqiw rrrprrapng cskpwrstwl
      361 ecqrdrppcw ghrsalghrp ltprislsra cvtchhtrpk apg
//
LOCUS       XP_061011229             381 aa            linear   MAM 02-DEC-2023
DEFINITION  ELMO domain-containing protein 3 isoform X2 [Dama dama].
ACCESSION   XP_061011229
VERSION     XP_061011229.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155246.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..381
                     /product="ELMO domain-containing protein 3 isoform X2"
                     /calculated_mol_wt=42075
     Region          154..313
                     /region_name="ELMO_CED12"
                     /note="ELMO/CED-12 family; pfam04727"
                     /db_xref="CDD:461411"
     CDS             1..381
                     /gene="ELMOD3"
                     /coded_by="XM_061155246.1:866..2011"
                     /db_xref="GeneID:133064788"
ORIGIN      
        1 mnenshsfhe kerrdgqvgs vsagcapppd kdgsavlafr gisiselknh svlqaltaea
       61 ngwepgvvnt evlqaqeewe avdsihpetg srasmdqpgq lisfsealqh fqtvdlssfk
      121 kriqptirrt glaalrhclf gppklhqglr eerdlvltia qcgldsqdpm hgrvlqtiyk
      181 kltgskfdca lhgdhwedlg fqgtnpatdl rgagflallh llylvmdskt llmareilrl
      241 srhhiqqfpf clmsvnitri aiqalreecl srecnrqqkv ipvvnsfyaa tflrlahvwr
      301 tqhktisdsg fvlkdleasa kkspkrllkt leiylagvsk gqasllgtqk csgpqaphsk
      361 dltftgvcdl sshssegtwl i
//
LOCUS       XP_061011230             349 aa            linear   MAM 02-DEC-2023
DEFINITION  macrophage-capping protein isoform X1 [Dama dama].
ACCESSION   XP_061011230
VERSION     XP_061011230.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155247.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..349
                     /product="macrophage-capping protein isoform X1"
                     /calculated_mol_wt=38796
     Region          17..120
                     /region_name="gelsolin_S1_like"
                     /note="Gelsolin sub-domain 1-like domain found in
                     gelsolin, severin, villin, and related proteins; cd11290"
                     /db_xref="CDD:200446"
     Site            order(29..30,65,71..72,74..76,78..80,82..83,94,96)
                     /site_type="other"
                     /note="putative actin binding interface [polypeptide
                     binding]"
                     /db_xref="CDD:200446"
     Region          138..226
                     /region_name="gelsolin_S2_like"
                     /note="Gelsolin sub-domain 2-like domain found in
                     gelsolin, severin, villin, and related proteins; cd11289"
                     /db_xref="CDD:200445"
     Region          247..347
                     /region_name="gelsolin_S3_like"
                     /note="Gelsolin sub-domain 3-like domain found in
                     gelsolin, severin, villin, and related proteins; cd11292"
                     /db_xref="CDD:200448"
     Site            order(342,347)
                     /site_type="other"
                     /note="putative nucleotide binding site [chemical
                     binding]"
                     /db_xref="CDD:200448"
     CDS             1..349
                     /gene="CAPG"
                     /coded_by="XM_061155247.1:116..1165"
                     /db_xref="GeneID:133064790"
ORIGIN      
        1 myspipqsss pfpptvklpg lhiwrveklk pvpvapenyg iffsgdsylv lhngpeelsh
       61 lhlwigqqss rdeqgacaml avhlntllge rpvqhresqg nesdlfmsyf prglkyqegg
      121 vdsafhktsp gtapaaikkl yqvkgkknir atervlswds fntgdcfild lgqnifawcg
      181 aksnilernk ardlalaird serqgkahve iitdgeepad miqvlgpkps lkegnpeedl
      241 tadrtnaqaa alykvsdatg qmnltklads spfalellip ddcfvldngl cgkiyiwkgr
      301 kanekerqaa lqvaedfiar mryapntqve ilpqgresai fkqffkdwk
//
LOCUS       XP_061011231             349 aa            linear   MAM 02-DEC-2023
DEFINITION  macrophage-capping protein isoform X1 [Dama dama].
ACCESSION   XP_061011231
VERSION     XP_061011231.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155248.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..349
                     /product="macrophage-capping protein isoform X1"
                     /calculated_mol_wt=38796
     Region          17..120
                     /region_name="gelsolin_S1_like"
                     /note="Gelsolin sub-domain 1-like domain found in
                     gelsolin, severin, villin, and related proteins; cd11290"
                     /db_xref="CDD:200446"
     Site            order(29..30,65,71..72,74..76,78..80,82..83,94,96)
                     /site_type="other"
                     /note="putative actin binding interface [polypeptide
                     binding]"
                     /db_xref="CDD:200446"
     Region          138..226
                     /region_name="gelsolin_S2_like"
                     /note="Gelsolin sub-domain 2-like domain found in
                     gelsolin, severin, villin, and related proteins; cd11289"
                     /db_xref="CDD:200445"
     Region          247..347
                     /region_name="gelsolin_S3_like"
                     /note="Gelsolin sub-domain 3-like domain found in
                     gelsolin, severin, villin, and related proteins; cd11292"
                     /db_xref="CDD:200448"
     Site            order(342,347)
                     /site_type="other"
                     /note="putative nucleotide binding site [chemical
                     binding]"
                     /db_xref="CDD:200448"
     CDS             1..349
                     /gene="CAPG"
                     /coded_by="XM_061155248.1:114..1163"
                     /db_xref="GeneID:133064790"
ORIGIN      
        1 myspipqsss pfpptvklpg lhiwrveklk pvpvapenyg iffsgdsylv lhngpeelsh
       61 lhlwigqqss rdeqgacaml avhlntllge rpvqhresqg nesdlfmsyf prglkyqegg
      121 vdsafhktsp gtapaaikkl yqvkgkknir atervlswds fntgdcfild lgqnifawcg
      181 aksnilernk ardlalaird serqgkahve iitdgeepad miqvlgpkps lkegnpeedl
      241 tadrtnaqaa alykvsdatg qmnltklads spfalellip ddcfvldngl cgkiyiwkgr
      301 kanekerqaa lqvaedfiar mryapntqve ilpqgresai fkqffkdwk
//
LOCUS       XP_061011232             348 aa            linear   MAM 02-DEC-2023
DEFINITION  macrophage-capping protein isoform X2 [Dama dama].
ACCESSION   XP_061011232
VERSION     XP_061011232.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155249.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..348
                     /product="macrophage-capping protein isoform X2"
                     /calculated_mol_wt=38709
     Region          16..119
                     /region_name="gelsolin_S1_like"
                     /note="Gelsolin sub-domain 1-like domain found in
                     gelsolin, severin, villin, and related proteins; cd11290"
                     /db_xref="CDD:200446"
     Site            order(28..29,64,70..71,73..75,77..79,81..82,93,95)
                     /site_type="other"
                     /note="putative actin binding interface [polypeptide
                     binding]"
                     /db_xref="CDD:200446"
     Region          137..225
                     /region_name="gelsolin_S2_like"
                     /note="Gelsolin sub-domain 2-like domain found in
                     gelsolin, severin, villin, and related proteins; cd11289"
                     /db_xref="CDD:200445"
     Region          246..346
                     /region_name="gelsolin_S3_like"
                     /note="Gelsolin sub-domain 3-like domain found in
                     gelsolin, severin, villin, and related proteins; cd11292"
                     /db_xref="CDD:200448"
     Site            order(341,346)
                     /site_type="other"
                     /note="putative nucleotide binding site [chemical
                     binding]"
                     /db_xref="CDD:200448"
     CDS             1..348
                     /gene="CAPG"
                     /coded_by="XM_061155249.1:111..1157"
                     /db_xref="GeneID:133064790"
ORIGIN      
        1 myspipqssp fpptvklpgl hiwrveklkp vpvapenygi ffsgdsylvl hngpeelshl
       61 hlwigqqssr deqgacamla vhlntllger pvqhresqgn esdlfmsyfp rglkyqeggv
      121 dsafhktspg tapaaikkly qvkgkknira tervlswdsf ntgdcfildl gqnifawcga
      181 ksnilernka rdlalairds erqgkahvei itdgeepadm iqvlgpkpsl kegnpeedlt
      241 adrtnaqaaa lykvsdatgq mnltkladss pfalellipd dcfvldnglc gkiyiwkgrk
      301 anekerqaal qvaedfiarm ryapntqvei lpqgresaif kqffkdwk
//
LOCUS       XP_061011233             348 aa            linear   MAM 02-DEC-2023
DEFINITION  macrophage-capping protein isoform X2 [Dama dama].
ACCESSION   XP_061011233
VERSION     XP_061011233.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155250.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..348
                     /product="macrophage-capping protein isoform X2"
                     /calculated_mol_wt=38709
     Region          16..119
                     /region_name="gelsolin_S1_like"
                     /note="Gelsolin sub-domain 1-like domain found in
                     gelsolin, severin, villin, and related proteins; cd11290"
                     /db_xref="CDD:200446"
     Site            order(28..29,64,70..71,73..75,77..79,81..82,93,95)
                     /site_type="other"
                     /note="putative actin binding interface [polypeptide
                     binding]"
                     /db_xref="CDD:200446"
     Region          137..225
                     /region_name="gelsolin_S2_like"
                     /note="Gelsolin sub-domain 2-like domain found in
                     gelsolin, severin, villin, and related proteins; cd11289"
                     /db_xref="CDD:200445"
     Region          246..346
                     /region_name="gelsolin_S3_like"
                     /note="Gelsolin sub-domain 3-like domain found in
                     gelsolin, severin, villin, and related proteins; cd11292"
                     /db_xref="CDD:200448"
     Site            order(341,346)
                     /site_type="other"
                     /note="putative nucleotide binding site [chemical
                     binding]"
                     /db_xref="CDD:200448"
     CDS             1..348
                     /gene="CAPG"
                     /coded_by="XM_061155250.1:97..1143"
                     /db_xref="GeneID:133064790"
ORIGIN      
        1 myspipqssp fpptvklpgl hiwrveklkp vpvapenygi ffsgdsylvl hngpeelshl
       61 hlwigqqssr deqgacamla vhlntllger pvqhresqgn esdlfmsyfp rglkyqeggv
      121 dsafhktspg tapaaikkly qvkgkknira tervlswdsf ntgdcfildl gqnifawcga
      181 ksnilernka rdlalairds erqgkahvei itdgeepadm iqvlgpkpsl kegnpeedlt
      241 adrtnaqaaa lykvsdatgq mnltkladss pfalellipd dcfvldnglc gkiyiwkgrk
      301 anekerqaal qvaedfiarm ryapntqvei lpqgresaif kqffkdwk
//
LOCUS       XP_061011234             347 aa            linear   MAM 02-DEC-2023
DEFINITION  trans-Golgi network integral membrane protein 2 [Dama dama].
ACCESSION   XP_061011234
VERSION     XP_061011234.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155251.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..347
                     /product="trans-Golgi network integral membrane protein 2"
                     /calculated_mol_wt=37260
     Region          <29..163
                     /region_name="LGT"
                     /note="Prolipoprotein diacylglyceryl transferase; cl00478"
                     /db_xref="CDD:469786"
     Region          188..347
                     /region_name="KCT2"
                     /note="Keratinocyte-associated gene product; pfam17818"
                     /db_xref="CDD:407686"
     CDS             1..347
                     /gene="TGOLN2"
                     /coded_by="XM_061155251.1:73..1116"
                     /db_xref="GeneID:133064791"
ORIGIN      
        1 mrfpvlfvll svvaadllls sapvaragap kevqasagss ghhglisqpq elsnqtflnq
       61 tdaktdtgsa gadqgpektn pdnstdelrl eitdtdnsva kqgskktdpg dsrtehhper
      121 adpgnsgsvq rpattysens gakqhlekte pgdseteqhp gkanpgnspt dqsnklvsss
      181 ssdnkestkl hvntvagkpl qtsrtepggk vladpsspqq egegkplelt edvepketee
      241 gdtepeedap pkeekemvgp asrenregtl sntwskkddl ykdnlgnasa esshffaylv
      301 taailvally iayhnkrkii afvlegkrsk vtrrpkatdy qrldqki
//
LOCUS       XP_061011235             758 aa            linear   MAM 02-DEC-2023
DEFINITION  vitamin K-dependent gamma-carboxylase isoform X1 [Dama dama].
ACCESSION   XP_061011235
VERSION     XP_061011235.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155252.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..758
                     /product="vitamin K-dependent gamma-carboxylase isoform
                     X1"
                     /calculated_mol_wt=87312
     Region          66..504
                     /region_name="VKG_Carbox"
                     /note="Vitamin K-dependent gamma-carboxylase; pfam05090"
                     /db_xref="CDD:461546"
     Region          512..604
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
     CDS             1..758
                     /gene="GGCX"
                     /coded_by="XM_061155252.1:90..2366"
                     /db_xref="GeneID:133064793"
ORIGIN      
        1 mavsarpara prgsdkvkkd kvaqtsgpcq gsrmgkllgf ewtdvsswer lvtllnrptd
       61 paslavfrfl fglmmvldip qerglssldr ryldglevcr fplldalqpl pldwmylvyt
      121 vmflgalgmm lglcyriscv lfllpywyvf lldktswnnh sylygllafq ltfvdahhyw
      181 svdgllsark rnahvplwny avlrgqifiv yfiagikkld adwvegysme ylsrhwlfsp
      241 fklvlseemt sllvvhwcgl lldlsagfll ffdasrpigf vfvsyfhcmn sqlfsigmfp
      301 yvmlassplf cspewprklv ahcpkklqel lplktapqps tscmykrsra kgsqkpglrh
      361 qlstaftlly lleqlflpys hfltqgynnw tnglygyswd mmvhsrshqh vkityrdgrt
      421 gelgylnpgv ftqsrrwkdh admlkqyatc lsrllpkynv tepqiyfdiw vsindrfqqr
      481 ifdprvdivq aawspfrrtp wlqpllmdls pwrtklqeik ssldnhtevv fiadfpglhl
      541 enfvsedlgn tsiqllqgev tvelvaeqrn qtlqegekmq lpageyhkvy tvssspscym
      601 yiyvntteva leqdlaylqe lkekvengse tgplppelqp llegevkggp eptplvqtfl
      661 rrqqrlqeie rrrnapfher lvrfllrkly ifrrsflmtc islrnlalgr psleqlaqev
      721 tyanlrpfep vgepspvntd ssnsnppepd sdpvhsef
//
LOCUS       XP_061011236             685 aa            linear   MAM 02-DEC-2023
DEFINITION  vitamin K-dependent gamma-carboxylase isoform X2 [Dama dama].
ACCESSION   XP_061011236
VERSION     XP_061011236.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155253.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..685
                     /product="vitamin K-dependent gamma-carboxylase isoform
                     X2"
                     /calculated_mol_wt=79323
     Region          1..431
                     /region_name="VKG_Carbox"
                     /note="Vitamin K-dependent gamma-carboxylase; pfam05090"
                     /db_xref="CDD:461546"
     Region          439..531
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
     CDS             1..685
                     /gene="GGCX"
                     /coded_by="XM_061155253.1:1299..3356"
                     /db_xref="GeneID:133064793"
ORIGIN      
        1 mmvldipqer glssldrryl dglevcrfpl ldalqplpld wmylvytvmf lgalgmmlgl
       61 cyriscvlfl lpywyvflld ktswnnhsyl ygllafqltf vdahhywsvd gllsarkrna
      121 hvplwnyavl rgqifivyfi agikkldadw vegysmeyls rhwlfspfkl vlseemtsll
      181 vvhwcgllld lsagfllffd asrpigfvfv syfhcmnsql fsigmfpyvm lassplfcsp
      241 ewprklvahc pkklqellpl ktapqpstsc mykrsrakgs qkpglrhqls taftllylle
      301 qlflpyshfl tqgynnwtng lygyswdmmv hsrshqhvki tyrdgrtgel gylnpgvftq
      361 srrwkdhadm lkqyatclsr llpkynvtep qiyfdiwvsi ndrfqqrifd prvdivqaaw
      421 spfrrtpwlq pllmdlspwr tklqeikssl dnhtevvfia dfpglhlenf vsedlgntsi
      481 qllqgevtve lvaeqrnqtl qegekmqlpa geyhkvytvs sspscymyiy vnttevaleq
      541 dlaylqelke kvengsetgp lppelqplle gevkggpept plvqtflrrq qrlqeierrr
      601 napfherlvr fllrklyifr rsflmtcisl rnlalgrpsl eqlaqevtya nlrpfepvge
      661 pspvntdssn snppepdsdp vhsef
//
LOCUS       XP_061011237             395 aa            linear   MAM 02-DEC-2023
DEFINITION  S-adenosylmethionine synthase [Dama dama].
ACCESSION   XP_061011237
VERSION     XP_061011237.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155254.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..395
                     /product="S-adenosylmethionine synthase"
                     /calculated_mol_wt=43560
     Region          16..395
                     /region_name="PTZ00104"
                     /note="S-adenosylmethionine synthase; Provisional"
                     /db_xref="CDD:240268"
     Site            order(19..21,23,57,59,61,66,68..70,134..137,139,181,183,
                     185,202,204,243,246,257..259,261..264,267,272..279,281,
                     285,317,319..323,328..329,331)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:350837"
     Site            order(23,29..31,55,70,113,116..117,133..134,179,181,206,
                     247,249..250,252,258,264..265,279..281,285,289,291,322)
                     /site_type="active"
                     /db_xref="CDD:350837"
     Site            order(23,29..30,179,181,265)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350837"
     CDS             1..395
                     /gene="MAT2A"
                     /coded_by="XM_061155254.1:115..1302"
                     /db_xref="GeneID:133064795"
ORIGIN      
        1 mngqlngfhd afieegtflf tsesvgeghp dkicdqisda vldahlqqdp dakvacetva
       61 ktgmillage itsraavdyq kvvretikhi gyddsskgfd yktcnvlval eqqspdiaqg
      121 vhldrneedi gagdqglmfg yatdeteecm pltivlahkl naklaelrrn gtlpwlrpds
      181 ktqvtvqymq drgavlpirv htivisvqhd eevcldemrd alkekvikav vpakyldedt
      241 iyhlqpsgrf viggpqgdag ltgrkiivdt yggwgahggg afsgkdytkv drsaayaarw
      301 vakslvkggl crrvlvqvsy aigvshplsi sifhygtsqk serelleivk knfdlrpgvi
      361 vrdldlkkpi yqrtaayghf grdsfpwevp kklky
//
LOCUS       XP_061011238             100 aa            linear   MAM 02-DEC-2023
DEFINITION  vesicle-associated membrane protein 8 [Dama dama].
ACCESSION   XP_061011238
VERSION     XP_061011238.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155255.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..100
                     /product="vesicle-associated membrane protein 8"
                     /calculated_mol_wt=11211
     Region          9..76
                     /region_name="R-SNARE_VAMP8"
                     /note="SNARE motif of VAMP8; cd15868"
                     /db_xref="CDD:277221"
     Site            order(11..13,15..16,18..23,25..27,29,32..33,35..37,39..44,
                     46..51,53..58,60..65,67..69)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277221"
     Site            36
                     /site_type="other"
                     /note="zero layer"
                     /db_xref="CDD:277221"
     CDS             1..100
                     /gene="VAMP8"
                     /coded_by="XM_061155255.1:154..456"
                     /db_xref="GeneID:133064796"
ORIGIN      
        1 measggggdd rvrnlrneve gvknimtqnv erilargenl dhlrnktedl eatsehfktt
       61 sqkvarkfww knvkmivlic vivfiivlfi vlfatgaipt
//
LOCUS       XP_061011239             271 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 150A isoform X1 [Dama dama].
ACCESSION   XP_061011239
VERSION     XP_061011239.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155256.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..271
                     /product="transmembrane protein 150A isoform X1"
                     /calculated_mol_wt=29022
     Region          3..229
                     /region_name="Frag1"
                     /note="Frag1/DRAM/Sfk1 family; pfam10277"
                     /db_xref="CDD:431193"
     CDS             1..271
                     /gene="TMEM150A"
                     /coded_by="XM_061155256.1:462..1277"
                     /db_xref="GeneID:133064798"
ORIGIN      
        1 mtawillpvs lsafsitglw tvyamavmnh hvcpvenwsy nescssdpte qggpkicctl
       61 ddipliskcg lyppesclfs lignlgafmv alicflrygq lleqsrhswv ntmtlitgct
      121 naaglvvvgn fqvdhakslh yvgtgvafta gllfvclhca lsyhganapq dlamaylriv
      181 latiafvtli ltgvffihes sqlqhgaalc ewvfvidilv fygtfsyefg avssdtlvaa
      241 lqptpsrack ssgssststh lncspesvam i
//
LOCUS       XP_061011240             271 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 150A isoform X1 [Dama dama].
ACCESSION   XP_061011240
VERSION     XP_061011240.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155257.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..271
                     /product="transmembrane protein 150A isoform X1"
                     /calculated_mol_wt=29022
     Region          3..229
                     /region_name="Frag1"
                     /note="Frag1/DRAM/Sfk1 family; pfam10277"
                     /db_xref="CDD:431193"
     CDS             1..271
                     /gene="TMEM150A"
                     /coded_by="XM_061155257.1:201..1016"
                     /db_xref="GeneID:133064798"
ORIGIN      
        1 mtawillpvs lsafsitglw tvyamavmnh hvcpvenwsy nescssdpte qggpkicctl
       61 ddipliskcg lyppesclfs lignlgafmv alicflrygq lleqsrhswv ntmtlitgct
      121 naaglvvvgn fqvdhakslh yvgtgvafta gllfvclhca lsyhganapq dlamaylriv
      181 latiafvtli ltgvffihes sqlqhgaalc ewvfvidilv fygtfsyefg avssdtlvaa
      241 lqptpsrack ssgssststh lncspesvam i
//
LOCUS       XP_061011241             247 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 150A isoform X2 [Dama dama].
ACCESSION   XP_061011241
VERSION     XP_061011241.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155258.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..247
                     /product="transmembrane protein 150A isoform X2"
                     /calculated_mol_wt=26399
     Region          1..205
                     /region_name="Frag1"
                     /note="Frag1/DRAM/Sfk1 family; pfam10277"
                     /db_xref="CDD:431193"
     CDS             1..247
                     /gene="TMEM150A"
                     /coded_by="XM_061155258.1:131..874"
                     /db_xref="GeneID:133064798"
ORIGIN      
        1 mavmnhhvcp venwsynesc ssdpteqggp kicctlddip liskcglypp esclfslign
       61 lgafmvalic flrygqlleq srhswvntmt litgctnaag lvvvgnfqvd hakslhyvgt
      121 gvaftagllf vclhcalsyh ganapqdlam aylrivlati afvtliltgv ffihessqlq
      181 hgaalcewvf vidilvfygt fsyefgavss dtlvaalqpt psrackssgs sststhlncs
      241 pesvami
//
LOCUS       XP_061011242             247 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 150A isoform X2 [Dama dama].
ACCESSION   XP_061011242
VERSION     XP_061011242.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155259.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..247
                     /product="transmembrane protein 150A isoform X2"
                     /calculated_mol_wt=26399
     Region          1..205
                     /region_name="Frag1"
                     /note="Frag1/DRAM/Sfk1 family; pfam10277"
                     /db_xref="CDD:431193"
     CDS             1..247
                     /gene="TMEM150A"
                     /coded_by="XM_061155259.1:239..982"
                     /db_xref="GeneID:133064798"
ORIGIN      
        1 mavmnhhvcp venwsynesc ssdpteqggp kicctlddip liskcglypp esclfslign
       61 lgafmvalic flrygqlleq srhswvntmt litgctnaag lvvvgnfqvd hakslhyvgt
      121 gvaftagllf vclhcalsyh ganapqdlam aylrivlati afvtliltgv ffihessqlq
      181 hgaalcewvf vidilvfygt fsyefgavss dtlvaalqpt psrackssgs sststhlncs
      241 pesvami
//
LOCUS       XP_061011243             189 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase RNF181 isoform X1 [Dama dama].
ACCESSION   XP_061011243
VERSION     XP_061011243.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155260.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..189
                     /product="E3 ubiquitin-protein ligase RNF181 isoform X1"
                     /calculated_mol_wt=21320
     Region          75..120
                     /region_name="RING-H2_RNF181"
                     /note="RING finger, H2 subclass, found in RING finger
                     protein 181 (RNF181) and similar proteins; cd16669"
                     /db_xref="CDD:438331"
     CDS             1..189
                     /gene="RNF181"
                     /coded_by="XM_061155260.1:72..641"
                     /db_xref="GeneID:133064799"
ORIGIN      
        1 masyfdehdc epldrerdpr tnmllelars lfnrmdfedl glvvdwdhhl pppaaknave
       61 nlprtvirgs qaelkcpvcl lefeeeetai empchhlfhs ncilpwlskt nscplcrhel
      121 ptdddtyeeh krdkafgdgp rpvctlcfrl asssrstasr tstepcthev araghwssat
      181 csscilnsh
//
LOCUS       XP_061011244             153 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase RNF181 isoform X2 [Dama dama].
ACCESSION   XP_061011244
VERSION     XP_061011244.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155261.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..153
                     /product="E3 ubiquitin-protein ligase RNF181 isoform X2"
                     /calculated_mol_wt=17831
     Region          75..120
                     /region_name="RING-H2_RNF181"
                     /note="RING finger, H2 subclass, found in RING finger
                     protein 181 (RNF181) and similar proteins; cd16669"
                     /db_xref="CDD:438331"
     CDS             1..153
                     /gene="RNF181"
                     /coded_by="XM_061155261.1:72..533"
                     /db_xref="GeneID:133064799"
ORIGIN      
        1 masyfdehdc epldrerdpr tnmllelars lfnrmdfedl glvvdwdhhl pppaaknave
       61 nlprtvirgs qaelkcpvcl lefeeeetai empchhlfhs ncilpwlskt nscplcrhel
      121 ptdddtyeeh krdkarkqqq khrlenlhga myt
//
LOCUS       XP_061011245             116 aa            linear   MAM 02-DEC-2023
DEFINITION  vesicle-associated membrane protein 5 [Dama dama].
ACCESSION   XP_061011245
VERSION     XP_061011245.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155262.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..116
                     /product="vesicle-associated membrane protein 5"
                     /calculated_mol_wt=12608
     Region          5..70
                     /region_name="R-SNARE_VAMP5"
                     /note="SNARE motif of VAMP5; cd15872"
                     /db_xref="CDD:277225"
     Site            order(5..7,9..10,12..17,19..21,23,26..27,29..31,33..38,
                     40..45,47..52,54..59,61..63)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277225"
     Site            30
                     /site_type="other"
                     /note="zero layer"
                     /db_xref="CDD:277225"
     CDS             1..116
                     /gene="VAMP5"
                     /coded_by="XM_061155262.1:85..435"
                     /db_xref="GeneID:133064801"
ORIGIN      
        1 magkelercq qqadevteim rnnfdkvler dgklvelqqr sdqlldmssa fskttknlaq
       61 kkrwenarcr iyvglavgsa llillivlla illpqsskgs sapqvqdagp algpge
//
LOCUS       XP_061011246             166 aa            linear   MAM 02-DEC-2023
DEFINITION  UPF0561 protein C2orf68 homolog [Dama dama].
ACCESSION   XP_061011246
VERSION     XP_061011246.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155263.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..166
                     /product="UPF0561 protein C2orf68 homolog"
                     /calculated_mol_wt=18432
     Region          4..126
                     /region_name="UPF0561"
                     /note="Uncharacterized protein family UPF0561; pfam10573"
                     /db_xref="CDD:287535"
     CDS             1..166
                     /gene="C11H2orf68"
                     /coded_by="XM_061155263.1:144..644"
                     /db_xref="GeneID:133064802"
ORIGIN      
        1 meaapgpgpg lcckpggrld mshgfvhhir rnqlarddyd kkvkqaakek arrrhtpapt
       61 rprrpdlqvy lprhrdgsth psnpdceesg essssgssep eppghqlfcl eyeadsgdit
      121 svivyqdddp grvseevsah tpleplmrea lklriqeeia krqsrh
//
LOCUS       XP_061011247             565 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin carboxyl-terminal hydrolase 39 [Dama dama].
ACCESSION   XP_061011247
VERSION     XP_061011247.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155264.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..565
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..565
                     /product="ubiquitin carboxyl-terminal hydrolase 39"
                     /calculated_mol_wt=65208
     Region          106..553
                     /region_name="Peptidase_C19M"
                     /note="A subfamily of Peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; cd02669"
                     /db_xref="CDD:239134"
     Site            order(229,234,513,531)
                     /site_type="active"
                     /db_xref="CDD:239134"
     CDS             1..565
                     /gene="USP39"
                     /coded_by="XM_061155264.1:48..1745"
                     /db_xref="GeneID:133064803"
ORIGIN      
        1 mssrskresr gstrgkrese srsssarvkr erdrerepea pssrgspvrv krevepasar
       61 eapapvvpav rvkrereade dseperevra kngrvdsedr rsrhcpyldt inrsvldfdf
      121 eklcsislsh inayaclvcg kyfqgrglks hayihsvqfs hhvflnlhtl kfyclpdnye
      181 iidssledit yvlkptftkq qianldkqak lsraydgtty lpgivglnni kandyanavl
      241 qalsnvpplr nyfleednyk nikrppgdim fllvqrfgel mrklwnprnf kahvspheml
      301 qavvlcskkt fqitkqgdgv dflswflnal hsalggtkkk kktivtdvfq gsmriftkkl
      361 phpdlpaeek eqllhndeyq etmvestfmy ltldlptapl ykdekeqlii pqvplfnila
      421 kfngitekey ktykenflkr fqltklppyl ifcikrftkn nffveknpti vnfpitnvdl
      481 reylseevqa vhknttydli anivhdgkps egsyrihvlh hgtgkwyelq dlqvtdilpq
      541 mitlseayiq iwkrrdndet nqqga
//
LOCUS       XP_061011248             323 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor ATOH8 isoform X1 [Dama dama].
ACCESSION   XP_061011248
VERSION     XP_061011248.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155265.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..323
                     /product="transcription factor ATOH8 isoform X1"
                     /calculated_mol_wt=34702
     Region          221..288
                     /region_name="bHLH_TS_ATOH8"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     protein atonal homolog 8 (ATOH8) and similar proteins;
                     cd11421"
                     /db_xref="CDD:381427"
     Site            order(229,233,235..237,239,244,262..265)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381427"
     Site            order(242..243,246..247,249..250,266,269,273,275..276,280,
                     282..283)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381427"
     CDS             1..323
                     /gene="ATOH8"
                     /coded_by="XM_061155265.1:458..1429"
                     /db_xref="GeneID:133064804"
ORIGIN      
        1 mkhipvlqdg pwktvcvkel nglkklkrkg keparrangy ktfrldleap ergatatngl
       61 rdrtqrlqpv ptpvparvap aapsvggadt agerggarap evldarkrgf algavgpglp
      121 tppppppppp apqgqvpggp etqpfrepgl rprvllcapp arptpsappa ppeppvrpap
      181 ptrpgessys sishviynnh pdssasprkr pgeataasse ikalqqtrrl lanarertrv
      241 htisaafeal rkqvpcysyg qklsklailr iacnyilsla rladldysad hsnlsfsecv
      301 qrctrtlqae grakkrkllf lkq
//
LOCUS       XP_061011249             318 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor ATOH8 isoform X2 [Dama dama].
ACCESSION   XP_061011249
VERSION     XP_061011249.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155266.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..318
                     /product="transcription factor ATOH8 isoform X2"
                     /calculated_mol_wt=34088
     Region          221..288
                     /region_name="bHLH_TS_ATOH8"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     protein atonal homolog 8 (ATOH8) and similar proteins;
                     cd11421"
                     /db_xref="CDD:381427"
     Site            order(229,233,235..237,239,244,262..265)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381427"
     Site            order(242..243,246..247,249..250,266,269,273,275..276,280,
                     282..283)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381427"
     CDS             1..318
                     /gene="ATOH8"
                     /coded_by="XM_061155266.1:453..1409"
                     /db_xref="GeneID:133064804"
ORIGIN      
        1 mkhipvlqdg pwktvcvkel nglkklkrkg keparrangy ktfrldleap ergatatngl
       61 rdrtqrlqpv ptpvparvap aapsvggadt agerggarap evldarkrgf algavgpglp
      121 tppppppppp apqgqvpggp etqpfrepgl rprvllcapp arptpsappa ppeppvrpap
      181 ptrpgessys sishviynnh pdssasprkr pgeataasse ikalqqtrrl lanarertrv
      241 htisaafeal rkqvpcysyg qklsklailr iacnyilsla rladldysad hsnlsfsecv
      301 qrctrtlqae grakkrke
//
LOCUS       XP_061011250             420 aa            linear   MAM 02-DEC-2023
DEFINITION  lactosylceramide alpha-2,3-sialyltransferase isoform X1 [Dama
            dama].
ACCESSION   XP_061011250
VERSION     XP_061011250.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155267.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..420
                     /product="lactosylceramide alpha-2,3-sialyltransferase
                     isoform X1"
                     /calculated_mol_wt=48013
     Region          194..403
                     /region_name="GT29_ST3GAL5"
                     /note="beta-galactoside alpha-2,3-sialyltransferase 5;
                     cd23983"
                     /db_xref="CDD:467711"
     Site            order(201..203,224..225,246,342..344,362..363,373..375,
                     391)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:467711"
     CDS             1..420
                     /gene="ST3GAL5"
                     /coded_by="XM_061155267.1:87..1349"
                     /db_xref="GeneID:133064807"
ORIGIN      
        1 mrkkaaggae rrplqprtea aaaapagram psdhsrvklr sdcsrpslqw ytraqnkmrr
       61 pnlllkdvlk ctllvfgvwi lfyilklnht teecdmkrmp fvdpdrikra qqyaqqvlqk
      121 ecrpqfakrs maqlfgsrys ldlppfvmkd paeseaeyky dppfgfrkfs gkvqtllell
      181 pehdfpehlr vksckrcvvi gsggilhgle lghalnqfdv virlnnapve gysehvgnkt
      241 tirmtypega plsdleyyss dlfvavlfks vdfnwlqami knetlpfwvr lffwkqvaek
      301 iplqpkqfri lnpviiketa fdilqysepq srfwgrdknv ptigviavvl athlcdevsl
      361 agfsyalnqp rtplhyfdnl cmaamnfqtm hnvttetsfl lklvregvvr dlsggiysef
//
LOCUS       XP_061011251             391 aa            linear   MAM 02-DEC-2023
DEFINITION  lactosylceramide alpha-2,3-sialyltransferase isoform X2 [Dama
            dama].
ACCESSION   XP_061011251
VERSION     XP_061011251.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155268.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..391
                     /product="lactosylceramide alpha-2,3-sialyltransferase
                     isoform X2"
                     /calculated_mol_wt=45070
     Region          165..374
                     /region_name="GT29_ST3GAL5"
                     /note="beta-galactoside alpha-2,3-sialyltransferase 5;
                     cd23983"
                     /db_xref="CDD:467711"
     Site            order(172..174,195..196,217,313..315,333..334,344..346,
                     362)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:467711"
     CDS             1..391
                     /gene="ST3GAL5"
                     /coded_by="XM_061155268.1:141..1316"
                     /db_xref="GeneID:133064807"
ORIGIN      
        1 mpsdhsrvkl rsdcsrpslq wytraqnkmr rpnlllkdvl kctllvfgvw ilfyilklnh
       61 tteecdmkrm pfvdpdrikr aqqyaqqvlq kecrpqfakr smaqlfgsry sldlppfvmk
      121 dpaeseaeyk ydppfgfrkf sgkvqtllel lpehdfpehl rvksckrcvv igsggilhgl
      181 elghalnqfd vvirlnnapv egysehvgnk ttirmtypeg aplsdleyys sdlfvavlfk
      241 svdfnwlqam iknetlpfwv rlffwkqvae kiplqpkqfr ilnpviiket afdilqysep
      301 qsrfwgrdkn vptigviavv lathlcdevs lagfsyalnq prtplhyfdn lcmaamnfqt
      361 mhnvttetsf llklvregvv rdlsggiyse f
//
LOCUS       XP_061011252             367 aa            linear   MAM 02-DEC-2023
DEFINITION  lactosylceramide alpha-2,3-sialyltransferase isoform X3 [Dama
            dama].
ACCESSION   XP_061011252
VERSION     XP_061011252.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155269.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..367
                     /product="lactosylceramide alpha-2,3-sialyltransferase
                     isoform X3"
                     /calculated_mol_wt=41494
     Region          194..350
                     /region_name="GT29"
                     /note="glycosyltransferase family 29; cl45931"
                     /db_xref="CDD:480271"
     Site            order(201..203,224..225,246,289..291,309..310,320..322,
                     338)
                     /site_type="active"
                     /db_xref="CDD:467690"
     CDS             1..367
                     /gene="ST3GAL5"
                     /coded_by="XM_061155269.1:89..1192"
                     /db_xref="GeneID:133064807"
ORIGIN      
        1 mrkkaaggae rrplqprtea aaaapagram psdhsrvklr sdcsrpslqw ytraqnkmrr
       61 pnlllkdvlk ctllvfgvwi lfyilklnht teecdmkrmp fvdpdrikra qqyaqqvlqk
      121 ecrpqfakrs maqlfgsrys ldlppfvmkd paeseaeyky dppfgfrkfs gkvqtllell
      181 pehdfpehlr vksckrcvvi gsggilhgle lghalnqfdv virlnnapve gysehvgnkt
      241 tirmtypega plsdleyyss dlfvavlfks vdfnwlqami knetlnvpti gviavvlath
      301 lcdevslagf syalnqprtp lhyfdnlcma amnfqtmhnv ttetsfllkl vregvvrdls
      361 ggiysef
//
LOCUS       XP_061011253            1720 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA-directed RNA polymerase I subunit RPA1 [Dama dama].
ACCESSION   XP_061011253
VERSION     XP_061011253.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155270.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1720
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1720
                     /product="DNA-directed RNA polymerase I subunit RPA1"
                     /calculated_mol_wt=193989
     Region          16..1004
                     /region_name="RNAP_I_RPA1_N"
                     /note="Largest subunit (RPA1) of eukaryotic RNA polymerase
                     I (RNAP I), N-terminal domain; cd01435"
                     /db_xref="CDD:259844"
     Site            order(64,67,74,77)
                     /site_type="other"
                     /note="Zn-binding [ion binding]"
                     /db_xref="CDD:259844"
     Site            order(424,429,436,442,552..554,588,590,592,986..987)
                     /site_type="active"
                     /note="putative active site region [active]"
                     /db_xref="CDD:259844"
     Region          958..1670
                     /region_name="RNA_pol_Rpb1_5"
                     /note="RNA polymerase Rpb1, domain 5; pfam04998"
                     /db_xref="CDD:398596"
     CDS             1..1720
                     /gene="POLR1A"
                     /coded_by="XM_061155270.1:273..5435"
                     /db_xref="GeneID:133064808"
ORIGIN      
        1 mlgsknmpwr rlqgisfgmy saeelkklsv ksitnpryld slgnpsvngl ydlalgpads
       61 kevcstcvqd ftncsghlgh ielpltvynp llfdklylll rgsclnchml tcpravvhll
      121 lcqlrvlevg alqavyeler ilyrfleena dptaceiqee leqytikilq nnllgsqgaq
      181 vknvcesrsk lisvfwkvhm takrcphckt grsvvrkehn skltitypam vhrradqkdt
      241 epqgieeaqm gkrgyltpss aqehlialwk negfflnylf lgledvgmes gfnpsmffld
      301 flvvppsryr pvnrlgdqmf tngqtvnlqa vmkdvvlirk llalmaqeqe lpsevaaptt
      361 eeekdssmam drsflsqlpg qsltdklyni wirlqshvni vfdsemdklm mekypgirqi
      421 lekkdglfrk hmmgkrvdya arsvicpdmy intneigipm vfatkltypq pvtpwnvqel
      481 rqavingpnv hpgasmvine dgsrtalsas dltqreavak qlltpatgap kpqgtkivcr
      541 hvkngdilll nrqptlhrps iqahrarvlp eekvlrlhya nckaynadfd gdemnahfpq
      601 selgraeayv lactdqqylv pkdgqplagl iqdhmvsgan mtirgcfftr eqymelvyrg
      661 ltdkvgrvkl fppailkpfp lwtgkqvvst lliniipedh iplnlsgkak iggkawvkep
      721 prlvpgfnpd smcesqviir agellcgvld kahygssayg lvhccyeiyg getsgrvltc
      781 larlftaylq lyrgftlgve dilvkpkadv rrhgiieest hcgpravraa lnlpeaascd
      841 evrgkwqdah lgkdqrdfnm idlkfkeevn hysneinkac mpfglhrqfp ennlqmmvqs
      901 gakgstvntm qiscllgqie legrrpplma sgkslpcfep yeftpraggf vtgrfltgik
      961 ppefffhcma greglvdtav ktsrsgylqr ciikhleglv vqydltvrds dgsvvqflyg
     1021 edgldipktq flqpkqfpfl asnyevimks khlhevlsra dpqkalrhfr aikkwhskhs
     1081 ntllrkgafl nysqkiqaav kalnlegtnq ngrspetyqm lrmwaeldeq srrkyqkkaa
     1141 pcpdpslsvw rpdiyfasvs etfekkmddy scewaaqaer syeksglsld slrtllqlkw
     1201 qrslcdpgea vgllaaqsig epstqmtlnt fhfagrgemn vtlgiprlre ilmvasanik
     1261 tpmmsvpvfn tkkalkkvks lkkqltrvcl gevlekidvq esfcmgekqn kfrvyqlrfq
     1321 flphayyqqe kcvrpedilh fmetrffkil meairkknsk asafrsvntr ratqrdldna
     1381 gesersrggq egdeeeeghi vdaeaeegda dasdakrkek qeeevdydse eeeekeeeee
     1441 eekededgqe egaglkegvq qeqeeggwvp eenslpgapl trpqkraqsr epqgaeaver
     1501 rvqavrechp fiedyqydtq gglwcqvtlk lplmkvnfdm sslvaslaqg aviyatkgit
     1561 rcllnettns knekelvlnt eginlpelfk yaevldlrrl ysndihamas tygieaalrv
     1621 iekeikdvfa vygitvdprh lslvadymcf egvykplnrf girsnssplq qmtfetsfqf
     1681 lkqatlmgsh delrspsacl vvgkvvkggt glfelkqplr
//
LOCUS       XP_061011254             687 aa            linear   MAM 02-DEC-2023
DEFINITION  small ribosomal subunit protein mS39 isoform X1 [Dama dama].
ACCESSION   XP_061011254
VERSION     XP_061011254.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155271.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..687
                     /product="small ribosomal subunit protein mS39 isoform X1"
                     /calculated_mol_wt=77607
     Region          258..304
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          262..289
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          294..346
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          295..330
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          323..383
                     /region_name="PPR_3"
                     /note="Pentatricopeptide repeat domain; pfam13812"
                     /db_xref="CDD:316342"
     Region          336..365
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          373..407
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..687
                     /gene="PTCD3"
                     /coded_by="XM_061155271.1:36..2099"
                     /db_xref="GeneID:133064809"
ORIGIN      
        1 masvasarwl rvscglcvpl tarragpcgr tpssrfysgs aavpkvegad iagteevvip
       61 kkktwdkvav lqalastvhr dttaapyafq ddpyliptss veshsfllak ksgenaakfi
      121 insypkyfqk diaephipcl mpeyfepqie eiseaalqer iklkkvkasv difdqllqag
      181 ttvslettns lldllcyygn qepstnynfq qqeqseelee aaeegdnvks kkaaghqlrv
      241 twraknhaer ifalmpekna hsyctmirgm vkhrahtqal slytellnnr lradvhtfns
      301 lieatalvvk ekfeekwnni ldllkqmvaq nvkpnlqtfn tilkclrrfy afgklpalqt
      361 fremkavgie pslatyhyii qlfyqhesps kgssliiydi mdeimgkkfs pqdpdddmff
      421 qsamrvcssl rdlelayqvh gllntgdnrk figpdprrnf yyskffsllc lmeqidvtlk
      481 wykdlipsvf fphsqtlidl lqaldvanrl emipqiwkds keyghtyrsd lkeeilmlma
      541 rdqhppelqa afadcaadik styesqdarq tapewpassl nyiailflra grtqeawkml
      601 glfrkhnkip rnellnefmd sakassspaq aievvnlans fslpvceglt qrliadfsls
      661 qeqkealgdl ttmtsdsdsd sdisegk
//
LOCUS       XP_061011255             558 aa            linear   MAM 02-DEC-2023
DEFINITION  small ribosomal subunit protein mS39 isoform X2 [Dama dama].
ACCESSION   XP_061011255
VERSION     XP_061011255.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155272.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..558
                     /product="small ribosomal subunit protein mS39 isoform X2"
                     /calculated_mol_wt=63529
     Region          258..304
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          262..289
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          294..346
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          295..330
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          323..383
                     /region_name="PPR_3"
                     /note="Pentatricopeptide repeat domain; pfam13812"
                     /db_xref="CDD:316342"
     Region          336..365
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..558
                     /gene="PTCD3"
                     /coded_by="XM_061155272.1:37..1713"
                     /db_xref="GeneID:133064809"
ORIGIN      
        1 masvasarwl rvscglcvpl tarragpcgr tpssrfysgs aavpkvegad iagteevvip
       61 kkktwdkvav lqalastvhr dttaapyafq ddpyliptss veshsfllak ksgenaakfi
      121 insypkyfqk diaephipcl mpeyfepqie eiseaalqer iklkkvkasv difdqllqag
      181 ttvslettns lldllcyygn qepstnynfq qqeqseelee aaeegdnvks kkaaghqlrv
      241 twraknhaer ifalmpekna hsyctmirgm vkhrahtqal slytellnnr lradvhtfns
      301 lieatalvvk ekfeekwnni ldllkqmvaq nvkpnlqtfn tilkclrrfy afgklpalqt
      361 fremkavgie pslatyhyii qlfyqhesps kgssliiydi mdeimgkkfs pqdpdddmff
      421 qsamrvcssl rdlelayqvh gllntgdnrk figpdprrnf yyskffsllc lmeqidvtlk
      481 wykdlipsvf fphsqtlidl lqaldvanrl emipqiwkds keyghtyrsd lkeeilmlma
      541 rdqhpperkp mvgfeihg
//
LOCUS       XP_061011256             188 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein bL35m [Dama dama].
ACCESSION   XP_061011256
VERSION     XP_061011256.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155273.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..188
                     /product="large ribosomal subunit protein bL35m"
                     /calculated_mol_wt=21506
     Region          102..161
                     /region_name="Ribosomal_L35p"
                     /note="Ribosomal protein L35; pfam01632"
                     /db_xref="CDD:460273"
     CDS             1..188
                     /gene="MRPL35"
                     /coded_by="XM_061155273.1:48..614"
                     /db_xref="GeneID:133064810"
ORIGIN      
        1 maasvfagav raasgilrpl nilassayrn ctknaclnsv lssrhfshiq tpvvssaprl
       61 itsvrnltcg qtatvlnrma lllpnvlkpp vrtvtyyssr kgkrktvkav iyrflrlhsg
      121 lwlrrkagyk kklwkktvar krrlrefvfc sktqsklldk mttsfwkrrn wyaddpyqmy
      181 hdrtnlkv
//
LOCUS       XP_061011257             758 aa            linear   MAM 02-DEC-2023
DEFINITION  MICOS complex subunit MIC60 isoform X1 [Dama dama].
ACCESSION   XP_061011257
VERSION     XP_061011257.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155274.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..758
                     /product="MICOS complex subunit MIC60 isoform X1"
                     /calculated_mol_wt=83734
     Region          42..746
                     /region_name="Mitofilin"
                     /note="Mitochondrial inner membrane protein; pfam09731"
                     /db_xref="CDD:430783"
     CDS             1..758
                     /gene="IMMT"
                     /coded_by="XM_061155274.1:137..2413"
                     /db_xref="GeneID:133064811"
ORIGIN      
        1 mlracqlsgv tstaqsclcg kfvlrplrpc rrystsgssr lsaskiagag ilfvgggigg
       61 tilyakwdsh frknvektip ysdklfemvl gsppytvplp kkpiqsgplk issvsevmke
      121 skqpasqpqk qkgdtsastt apteaaqiis aagealsvpa pvvqheepvk tdhpetgegk
      181 pkpatseeas stsvrerppe evaarlaqqe kqeqvkiesl aksledalsq tacitqqaiv
      241 aqnaavqavt ahanilkaam ddsevagdkk saqwrtvega lkerrkavde aadallkake
      301 elekmksvie nakkeevaga kshitaaegk lhnmivdldn vvqkvqaaqs eakvvsqyhe
      361 lvvqarddfk reldsitpev lpgwkgmsis dladklsadd lnaliahahr ridqlnrala
      421 eqkatekqhi alalekqkle ekrafdsava kalehhrsei qaeqdrkvee vrdamenemr
      481 tqlrrqaaah tdhlrdvlrv qeqelkfefe qdlseklaeq elqfrrlsqe qvdnftldin
      541 tayarlrgie qavqshavae eearkvhqlw lsvealryrm ktasadlptv plgsaveair
      601 vscsdsefaq altaalppes ltrgvyseet lrvrfyavqk larrvamide trnslyqyfl
      661 sylqslllfp pqqlkppael cpedtntfkl lsyasycieh gdlelaakfv nqlkgesrrv
      721 aqdwlkearm tletkqivei ltayasavgl gttqvqqe
//
LOCUS       XP_061011258             753 aa            linear   MAM 02-DEC-2023
DEFINITION  MICOS complex subunit MIC60 isoform X2 [Dama dama].
ACCESSION   XP_061011258
VERSION     XP_061011258.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155275.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..753
                     /product="MICOS complex subunit MIC60 isoform X2"
                     /calculated_mol_wt=83249
     Region          42..741
                     /region_name="Mitofilin"
                     /note="Mitochondrial inner membrane protein; pfam09731"
                     /db_xref="CDD:430783"
     CDS             1..753
                     /gene="IMMT"
                     /coded_by="XM_061155275.1:137..2398"
                     /db_xref="GeneID:133064811"
ORIGIN      
        1 mlracqlsgv tstaqsclcg kfvlrplrpc rrystsgssr lsaskiagag ilfvgggigg
       61 tilyakwdsh frknvektip ysdklfemvl gsppytvplp kkpiqsgplk issvsevmke
      121 skqpasqpqk qkgdtsastt apteaaqiis aagealsvpa pvvqheepvk tdhpetgegk
      181 pkpatseeas stsvrerppe evaarlaqqe kqeqvkiesl aksledalsq tacitqqaiv
      241 aqnaavqavt ahanilkaam ddsevagdkk saqwrtvega lkerrkavde aadallkake
      301 elekmksvie nakkeevaga kshitaaegk lhnmivdldn vvqkvqaaqs eakvvsqyhe
      361 lvvqarddfk reldsitpev lpgwkgmtdk lsaddlnali ahahrridql nralaeqkat
      421 ekqhialale kqkleekraf dsavakaleh hrseiqaeqd rkveevrdam enemrtqlrr
      481 qaaahtdhlr dvlrvqeqel kfefeqdlse klaeqelqfr rlsqeqvdnf tldintayar
      541 lrgieqavqs havaeeeark vhqlwlsvea lryrmktasa dlptvplgsa veairvscsd
      601 sefaqaltaa lppesltrgv yseetlrvrf yavqklarrv amidetrnsl yqyflsylqs
      661 lllfppqqlk ppaelcpedt ntfkllsyas yciehgdlel aakfvnqlkg esrrvaqdwl
      721 kearmtletk qiveiltaya savglgttqv qqe
//
LOCUS       XP_061011259             747 aa            linear   MAM 02-DEC-2023
DEFINITION  MICOS complex subunit MIC60 isoform X3 [Dama dama].
ACCESSION   XP_061011259
VERSION     XP_061011259.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155276.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..747
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..747
                     /product="MICOS complex subunit MIC60 isoform X3"
                     /calculated_mol_wt=82681
     Region          42..735
                     /region_name="Mitofilin"
                     /note="Mitochondrial inner membrane protein; pfam09731"
                     /db_xref="CDD:430783"
     CDS             1..747
                     /gene="IMMT"
                     /coded_by="XM_061155276.1:136..2379"
                     /db_xref="GeneID:133064811"
ORIGIN      
        1 mlracqlsgv tstaqsclcg kfvlrplrpc rrystsgssr lsaskiagag ilfvgggigg
       61 tilyakwdsh frknvektip ysdklfemvl gsppytvplp kkpiqsgplk issvsevmke
      121 skqpasqpqk qkgdtsastt agealsvpap vvqheepvkt dhpetgegkp kpatseeass
      181 tsvrerppee vaarlaqqek qeqvkiesla ksledalsqt acitqqaiva qnaavqavta
      241 hanilkaamd dsevagdkks aqwrtvegal kerrkavdea adallkakee lekmksvien
      301 akkeevagak shitaaegkl hnmivdldnv vqkvqaaqse akvvsqyhel vvqarddfkr
      361 eldsitpevl pgwkgmsisd ladklsaddl naliahahrr idqlnralae qkatekqhia
      421 lalekqklee krafdsavak alehhrseiq aeqdrkveev rdamenemrt qlrrqaaaht
      481 dhlrdvlrvq eqelkfefeq dlseklaeqe lqfrrlsqeq vdnftldint ayarlrgieq
      541 avqshavaee earkvhqlwl svealryrmk tasadlptvp lgsaveairv scsdsefaqa
      601 ltaalppesl trgvyseetl rvrfyavqkl arrvamidet rnslyqyfls ylqslllfpp
      661 qqlkppaelc pedtntfkll syasyciehg dlelaakfvn qlkgesrrva qdwlkearmt
      721 letkqiveil tayasavglg ttqvqqe
//
LOCUS       XP_061011260             742 aa            linear   MAM 02-DEC-2023
DEFINITION  MICOS complex subunit MIC60 isoform X4 [Dama dama].
ACCESSION   XP_061011260
VERSION     XP_061011260.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155277.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..742
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..742
                     /product="MICOS complex subunit MIC60 isoform X4"
                     /calculated_mol_wt=82196
     Region          42..730
                     /region_name="Mitofilin"
                     /note="Mitochondrial inner membrane protein; pfam09731"
                     /db_xref="CDD:430783"
     CDS             1..742
                     /gene="IMMT"
                     /coded_by="XM_061155277.1:136..2364"
                     /db_xref="GeneID:133064811"
ORIGIN      
        1 mlracqlsgv tstaqsclcg kfvlrplrpc rrystsgssr lsaskiagag ilfvgggigg
       61 tilyakwdsh frknvektip ysdklfemvl gsppytvplp kkpiqsgplk issvsevmke
      121 skqpasqpqk qkgdtsastt agealsvpap vvqheepvkt dhpetgegkp kpatseeass
      181 tsvrerppee vaarlaqqek qeqvkiesla ksledalsqt acitqqaiva qnaavqavta
      241 hanilkaamd dsevagdkks aqwrtvegal kerrkavdea adallkakee lekmksvien
      301 akkeevagak shitaaegkl hnmivdldnv vqkvqaaqse akvvsqyhel vvqarddfkr
      361 eldsitpevl pgwkgmtdkl saddlnalia hahrridqln ralaeqkate kqhialalek
      421 qkleekrafd savakalehh rseiqaeqdr kveevrdame nemrtqlrrq aaahtdhlrd
      481 vlrvqeqelk fefeqdlsek laeqelqfrr lsqeqvdnft ldintayarl rgieqavqsh
      541 avaeeearkv hqlwlsveal ryrmktasad lptvplgsav eairvscsds efaqaltaal
      601 ppesltrgvy seetlrvrfy avqklarrva midetrnsly qyflsylqsl llfppqqlkp
      661 paelcpedtn tfkllsyasy ciehgdlela akfvnqlkge srrvaqdwlk earmtletkq
      721 iveiltayas avglgttqvq qe
//
LOCUS       XP_061011261             680 aa            linear   MAM 02-DEC-2023
DEFINITION  MICOS complex subunit MIC60 isoform X5 [Dama dama].
ACCESSION   XP_061011261
VERSION     XP_061011261.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155278.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..680
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..680
                     /product="MICOS complex subunit MIC60 isoform X5"
                     /calculated_mol_wt=75457
     Region          42..668
                     /region_name="Mitofilin"
                     /note="Mitochondrial inner membrane protein; pfam09731"
                     /db_xref="CDD:430783"
     CDS             1..680
                     /gene="IMMT"
                     /coded_by="XM_061155278.1:137..2179"
                     /db_xref="GeneID:133064811"
ORIGIN      
        1 mlracqlsgv tstaqsclcg kfvlrplrpc rrystsgssr lsaskiagag ilfvgggigg
       61 tilyakwdsh frknvektip ysdklfemvl gsppytvplp kkpiqsgplk issvsevmke
      121 skqpasqpqk qkgdtsastt alaksledal sqtacitqqa ivaqnaavqa vtahanilka
      181 amddsevagd kksaqwrtve galkerrkav deaadallka keelekmksv ienakkeeva
      241 gakshitaae gklhnmivdl dnvvqkvqaa qseakvvsqy helvvqardd fkreldsitp
      301 evlpgwkgms isdladklsa ddlnaliaha hrridqlnra laeqkatekq hialalekqk
      361 leekrafdsa vakalehhrs eiqaeqdrkv eevrdamene mrtqlrrqaa ahtdhlrdvl
      421 rvqeqelkfe feqdlsekla eqelqfrrls qeqvdnftld intayarlrg ieqavqshav
      481 aeeearkvhq lwlsvealry rmktasadlp tvplgsavea irvscsdsef aqaltaalpp
      541 esltrgvyse etlrvrfyav qklarrvami detrnslyqy flsylqslll fppqqlkppa
      601 elcpedtntf kllsyasyci ehgdlelaak fvnqlkgesr rvaqdwlkea rmtletkqiv
      661 eiltayasav glgttqvqqe
//
LOCUS       XP_061011262             666 aa            linear   MAM 02-DEC-2023
DEFINITION  MICOS complex subunit MIC60 isoform X6 [Dama dama].
ACCESSION   XP_061011262
VERSION     XP_061011262.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155279.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..666
                     /product="MICOS complex subunit MIC60 isoform X6"
                     /calculated_mol_wt=74015
     Region          12..654
                     /region_name="Mitofilin"
                     /note="Mitochondrial inner membrane protein; pfam09731"
                     /db_xref="CDD:430783"
     CDS             1..666
                     /gene="IMMT"
                     /coded_by="XM_061155279.1:255..2255"
                     /db_xref="GeneID:133064811"
ORIGIN      
        1 mpqilhfrqf siqsgplkis svsevmkesk qpasqpqkqk gdtsasttap teaaqiisaa
       61 gealsvpapv vqheepvktd hpetgegkpk patseeasst svrerppeev aarlaqqekq
      121 eqvkieslak sledalsqta citqqaivaq naavqavtah anilkaamdd sevagdkksa
      181 qwrtvegalk errkavdeaa dallkakeel ekmksviena kkeevagaks hitaaegklh
      241 nmivdldnvv qkvqaaqsea kvvsqyhelv vqarddfkre ldsitpevlp gwkgmsisdl
      301 adklsaddln aliahahrri dqlnralaeq katekqhial alekqkleek rafdsavaka
      361 lehhrseiqa eqdrkveevr damenemrtq lrrqaaahtd hlrdvlrvqe qelkfefeqd
      421 lseklaeqel qfrrlsqeqv dnftldinta yarlrgieqa vqshavaeee arkvhqlwls
      481 vealryrmkt asadlptvpl gsaveairvs csdsefaqal taalppeslt rgvyseetlr
      541 vrfyavqkla rrvamidetr nslyqyflsy lqslllfppq qlkppaelcp edtntfklls
      601 yasyciehgd lelaakfvnq lkgesrrvaq dwlkearmtl etkqiveilt ayasavglgt
      661 tqvqqe
//
LOCUS       XP_061011263             655 aa            linear   MAM 02-DEC-2023
DEFINITION  MICOS complex subunit MIC60 isoform X7 [Dama dama].
ACCESSION   XP_061011263
VERSION     XP_061011263.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155280.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..655
                     /product="MICOS complex subunit MIC60 isoform X7"
                     /calculated_mol_wt=72962
     Region          12..643
                     /region_name="Mitofilin"
                     /note="Mitochondrial inner membrane protein; pfam09731"
                     /db_xref="CDD:430783"
     CDS             1..655
                     /gene="IMMT"
                     /coded_by="XM_061155280.1:255..2222"
                     /db_xref="GeneID:133064811"
ORIGIN      
        1 mpqilhfrqf siqsgplkis svsevmkesk qpasqpqkqk gdtsasttag ealsvpapvv
       61 qheepvktdh petgegkpkp atseeassts vrerppeeva arlaqqekqe qvkieslaks
      121 ledalsqtac itqqaivaqn aavqavtaha nilkaamdds evagdkksaq wrtvegalke
      181 rrkavdeaad allkakeele kmksvienak keevagaksh itaaegklhn mivdldnvvq
      241 kvqaaqseak vvsqyhelvv qarddfkrel dsitpevlpg wkgmsisdla dklsaddlna
      301 liahahrrid qlnralaeqk atekqhiala lekqkleekr afdsavakal ehhrseiqae
      361 qdrkveevrd amenemrtql rrqaaahtdh lrdvlrvqeq elkfefeqdl seklaeqelq
      421 frrlsqeqvd nftldintay arlrgieqav qshavaeeea rkvhqlwlsv ealryrmkta
      481 sadlptvplg saveairvsc sdsefaqalt aalppesltr gvyseetlrv rfyavqklar
      541 rvamidetrn slyqyflsyl qslllfppqq lkppaelcpe dtntfkllsy asyciehgdl
      601 elaakfvnql kgesrrvaqd wlkearmtle tkqiveilta yasavglgtt qvqqe
//
LOCUS       XP_061011264             588 aa            linear   MAM 02-DEC-2023
DEFINITION  MICOS complex subunit MIC60 isoform X8 [Dama dama].
ACCESSION   XP_061011264
VERSION     XP_061011264.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155281.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..588
                     /product="MICOS complex subunit MIC60 isoform X8"
                     /calculated_mol_wt=65738
     Region          12..576
                     /region_name="Mitofilin"
                     /note="Mitochondrial inner membrane protein; pfam09731"
                     /db_xref="CDD:430783"
     CDS             1..588
                     /gene="IMMT"
                     /coded_by="XM_061155281.1:200..1966"
                     /db_xref="GeneID:133064811"
ORIGIN      
        1 mpqilhfrqf siqsgplkis svsevmkesk qpasqpqkqk gdtsasttal aksledalsq
       61 tacitqqaiv aqnaavqavt ahanilkaam ddsevagdkk saqwrtvega lkerrkavde
      121 aadallkake elekmksvie nakkeevaga kshitaaegk lhnmivdldn vvqkvqaaqs
      181 eakvvsqyhe lvvqarddfk reldsitpev lpgwkgmsis dladklsadd lnaliahahr
      241 ridqlnrala eqkatekqhi alalekqkle ekrafdsava kalehhrsei qaeqdrkvee
      301 vrdamenemr tqlrrqaaah tdhlrdvlrv qeqelkfefe qdlseklaeq elqfrrlsqe
      361 qvdnftldin tayarlrgie qavqshavae eearkvhqlw lsvealryrm ktasadlptv
      421 plgsaveair vscsdsefaq altaalppes ltrgvyseet lrvrfyavqk larrvamide
      481 trnslyqyfl sylqslllfp pqqlkppael cpedtntfkl lsyasycieh gdlelaakfv
      541 nqlkgesrrv aqdwlkearm tletkqivei ltayasavgl gttqvqqe
//
LOCUS       XP_061011265             220 aa            linear   MAM 02-DEC-2023
DEFINITION  MICOS complex subunit MIC60 isoform X9 [Dama dama].
ACCESSION   XP_061011265
VERSION     XP_061011265.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155282.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..220
                     /product="MICOS complex subunit MIC60 isoform X9"
                     /calculated_mol_wt=23359
     Region          42..>216
                     /region_name="Mitofilin"
                     /note="Mitochondrial inner membrane protein; pfam09731"
                     /db_xref="CDD:430783"
     CDS             1..220
                     /gene="IMMT"
                     /coded_by="XM_061155282.1:144..806"
                     /db_xref="GeneID:133064811"
ORIGIN      
        1 mlracqlsgv tstaqsclcg kfvlrplrpc rrystsgssr lsaskiagag ilfvgggigg
       61 tilyakwdsh frknvektip ysdklfemvl gsppytvplp kkpiqsgplk issvsevmke
      121 skqpasqpqk qkgdtsastt apteaaqiis aagealsvpa pvvqheepvk tdhpetgegk
      181 pkpatseeas stsvrerppe evaarlaqqe kqeqvkiecm
//
LOCUS       XP_061011266             209 aa            linear   MAM 02-DEC-2023
DEFINITION  MICOS complex subunit MIC60 isoform X10 [Dama dama].
ACCESSION   XP_061011266
VERSION     XP_061011266.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155283.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..209
                     /product="MICOS complex subunit MIC60 isoform X10"
                     /calculated_mol_wt=22306
     Region          42..>205
                     /region_name="Mitofilin"
                     /note="Mitochondrial inner membrane protein; pfam09731"
                     /db_xref="CDD:430783"
     CDS             1..209
                     /gene="IMMT"
                     /coded_by="XM_061155283.1:142..771"
                     /db_xref="GeneID:133064811"
ORIGIN      
        1 mlracqlsgv tstaqsclcg kfvlrplrpc rrystsgssr lsaskiagag ilfvgggigg
       61 tilyakwdsh frknvektip ysdklfemvl gsppytvplp kkpiqsgplk issvsevmke
      121 skqpasqpqk qkgdtsastt agealsvpap vvqheepvkt dhpetgegkp kpatseeass
      181 tsvrerppee vaarlaqqek qeqvkiecm
//
LOCUS       XP_061011267             202 aa            linear   MAM 02-DEC-2023
DEFINITION  receptor expression-enhancing protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061011267
VERSION     XP_061011267.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155284.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..202
                     /product="receptor expression-enhancing protein 1 isoform
                     X1"
                     /calculated_mol_wt=22275
     Region          20..95
                     /region_name="TB2_DP1_HVA22"
                     /note="TB2/DP1, HVA22 family; pfam03134"
                     /db_xref="CDD:460820"
     CDS             1..202
                     /gene="REEP1"
                     /coded_by="XM_061155284.1:35..643"
                     /db_xref="GeneID:133064813"
ORIGIN      
        1 meknkgrslr irlifgtlyp ayysykavks kdikeyvkwm mywiifalft taetftdifl
       61 cwfpfyyelk iafvawllsp ytkgssllyr kfvhptlssk ekeiddclvq akdrsydalv
      121 hfgkrglnva ataavmaask gqgalserlr sfsmqdlsti rgdgapapsg ppppgpgras
      181 gkhgqpkmsr sasesagssg ta
//
LOCUS       XP_061011268             201 aa            linear   MAM 02-DEC-2023
DEFINITION  receptor expression-enhancing protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061011268
VERSION     XP_061011268.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155285.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..201
                     /product="receptor expression-enhancing protein 1 isoform
                     X2"
                     /calculated_mol_wt=22074
     Region          19..94
                     /region_name="TB2_DP1_HVA22"
                     /note="TB2/DP1, HVA22 family; pfam03134"
                     /db_xref="CDD:460820"
     CDS             1..201
                     /gene="REEP1"
                     /coded_by="XM_061155285.1:54..659"
                     /db_xref="GeneID:133064813"
ORIGIN      
        1 mvawiisrlv vlifgtlypa yysykavksk dikeyvkwmm ywiifalftt aetftdiflc
       61 wfpfyyelki afvawllspy tkgssllyrk fvhptlsske keiddclvqa kdrsydalvh
      121 fgkrglnvaa taavmaaskg qgalserlrs fsmqdlstir gdgapapsgp pppgpgrasg
      181 khgqpkmsrs asesagssgt a
//
LOCUS       XP_061011269             285 aa            linear   MAM 02-DEC-2023
DEFINITION  receptor expression-enhancing protein 1 isoform X3 [Dama dama].
ACCESSION   XP_061011269
VERSION     XP_061011269.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155286.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..285
                     /product="receptor expression-enhancing protein 1 isoform
                     X3"
                     /calculated_mol_wt=31769
     Region          20..95
                     /region_name="TB2_DP1_HVA22"
                     /note="TB2/DP1, HVA22 family; pfam03134"
                     /db_xref="CDD:460820"
     CDS             1..285
                     /gene="REEP1"
                     /coded_by="XM_061155286.1:35..892"
                     /db_xref="GeneID:133064813"
ORIGIN      
        1 meknkgrslr irlifgtlyp ayysykavks kdikeyvkwm mywiifalft taetftdifl
       61 cwfpfyyelk iafvawllsp ytkgssllyr kfvhptlssk ekeiddclvq akdrsydalv
      121 hfgkrglnva ataavmaask gqgalserlr sfsmqdlsti rgdgapapsg ppppgpgras
      181 gkhgqpkmsr sasesagssv ctccstcrtr kvvegdvdeg gvkawgphqv qnplafsdee
      241 eedlldfmyk fkaprktefp leapprilrs rfrkkstsss atett
//
LOCUS       XP_061011270            1322 aa            linear   MAM 02-DEC-2023
DEFINITION  lysine-specific demethylase 3A isoform X1 [Dama dama].
ACCESSION   XP_061011270
VERSION     XP_061011270.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155287.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1322
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1322
                     /product="lysine-specific demethylase 3A isoform X1"
                     /calculated_mol_wt=147565
     Region          1065..1135
                     /region_name="JmjC"
                     /note="A domain family that is part of the cupin
                     metalloenzyme superfamily; smart00558"
                     /db_xref="CDD:214721"
     Region          1152..1265
                     /region_name="JmjC"
                     /note="JmjC domain, hydroxylase; pfam02373"
                     /db_xref="CDD:396791"
     CDS             1..1322
                     /gene="KDM3A"
                     /coded_by="XM_061155287.1:179..4147"
                     /db_xref="GeneID:133064815"
ORIGIN      
        1 mvltlgeswp vlvgkrflsl saadggdggh dswdvervae wpwlsgtira vshtdvtkkd
       61 lkvcvefdge swrkrrwidv ysllrraflv ehnlvlaerk speiserivq wpaimyksll
      121 dkaglgsits irflgdqqrv flskdllkpi qdvnnlrlsl mdnqsvskef qalivkhlde
      181 shllqgdknl vgsevkiysl dpstqwfsat ivngnptskt lqvnceeipa lkivdpslih
      241 vevvhdnfvt cgnstrmgav krkssenngn lvskqakscs easpsvcpvq svpttvfkei
      301 llgctaatpp skdprqqstp qaansppnlg akipqgchkq ilpelsscln tkpeilrtkp
      361 dvackvells skssqigtgd lktlsepkgn csqlktstde essveslpps tdspkecvpt
      421 kassmaelei tntpelqkhf ehapstsdvl skkpeekaav ssnspngcie krgepstlgc
      481 qsqnikassa kvdpescctr snnkfqnaps rksvltdpak lkklqqsgea fvqddscvni
      541 vaqlpkcrec rldslrkdke pqkdspvfcr ffhfrrlqfn khgvlrvegf ltpnkydsea
      601 iglwlpltrn vvgtdldtak yilanigdhf cqmvisekea mstiephrqv awkravkgvr
      661 emcdvcdtti fnlhwvcprc gfgvcvdcyr mkrkncqqga ayktfnwlrc vksqihepen
      721 lmptqiipgk alydvgdivh svrakwgika ncpcsnrqfk lfskpasked ikqtsltgek
      781 atlgtmlqqn psglepvtvg geaaskpass vkptcpasts plnwladlts gnvnkenkek
      841 qpampvlkne ikclpplppl sksstvlhtf nstiltpvsn nnsgflrnll nsstgkteng
      901 lkntpkildd ifaslvqnkt csdlskrpqg ltikpsilgf dtphywlcdn rllclqdpnn
      961 ksnwnvfrec wkqgqpvmvs gvhhklntel wkpesfrref gnqevdlvnc rtneiitgat
     1021 vgdfwdgfed vpnrlkneke pmvlklkdwp pgedfrdmmp srfddlmani plpeytrrdg
     1081 klnlasrlpn yfvrpdlgpk mynayglitp edrkygttnl hldvsdaanv mvyvgipkgq
     1141 cdqeeevlkt iqdgdsdelt ikrfiegkek pgalwhiyaa kdtekirefl kkvseeqgqe
     1201 npadhdpihd qswyldrslr krlqqeygvq gwaivqflgd vvfipagaph qvhnlyscik
     1261 vaedfvspeh vkhcfwltqe frylsqthtn hedklqvknv iyhavkdava mlkasessfg
     1321 kp
//
LOCUS       XP_061011271            1322 aa            linear   MAM 02-DEC-2023
DEFINITION  lysine-specific demethylase 3A isoform X1 [Dama dama].
ACCESSION   XP_061011271
VERSION     XP_061011271.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155288.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1322
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1322
                     /product="lysine-specific demethylase 3A isoform X1"
                     /calculated_mol_wt=147565
     Region          1065..1135
                     /region_name="JmjC"
                     /note="A domain family that is part of the cupin
                     metalloenzyme superfamily; smart00558"
                     /db_xref="CDD:214721"
     Region          1152..1265
                     /region_name="JmjC"
                     /note="JmjC domain, hydroxylase; pfam02373"
                     /db_xref="CDD:396791"
     CDS             1..1322
                     /gene="KDM3A"
                     /coded_by="XM_061155288.1:132..4100"
                     /db_xref="GeneID:133064815"
ORIGIN      
        1 mvltlgeswp vlvgkrflsl saadggdggh dswdvervae wpwlsgtira vshtdvtkkd
       61 lkvcvefdge swrkrrwidv ysllrraflv ehnlvlaerk speiserivq wpaimyksll
      121 dkaglgsits irflgdqqrv flskdllkpi qdvnnlrlsl mdnqsvskef qalivkhlde
      181 shllqgdknl vgsevkiysl dpstqwfsat ivngnptskt lqvnceeipa lkivdpslih
      241 vevvhdnfvt cgnstrmgav krkssenngn lvskqakscs easpsvcpvq svpttvfkei
      301 llgctaatpp skdprqqstp qaansppnlg akipqgchkq ilpelsscln tkpeilrtkp
      361 dvackvells skssqigtgd lktlsepkgn csqlktstde essveslpps tdspkecvpt
      421 kassmaelei tntpelqkhf ehapstsdvl skkpeekaav ssnspngcie krgepstlgc
      481 qsqnikassa kvdpescctr snnkfqnaps rksvltdpak lkklqqsgea fvqddscvni
      541 vaqlpkcrec rldslrkdke pqkdspvfcr ffhfrrlqfn khgvlrvegf ltpnkydsea
      601 iglwlpltrn vvgtdldtak yilanigdhf cqmvisekea mstiephrqv awkravkgvr
      661 emcdvcdtti fnlhwvcprc gfgvcvdcyr mkrkncqqga ayktfnwlrc vksqihepen
      721 lmptqiipgk alydvgdivh svrakwgika ncpcsnrqfk lfskpasked ikqtsltgek
      781 atlgtmlqqn psglepvtvg geaaskpass vkptcpasts plnwladlts gnvnkenkek
      841 qpampvlkne ikclpplppl sksstvlhtf nstiltpvsn nnsgflrnll nsstgkteng
      901 lkntpkildd ifaslvqnkt csdlskrpqg ltikpsilgf dtphywlcdn rllclqdpnn
      961 ksnwnvfrec wkqgqpvmvs gvhhklntel wkpesfrref gnqevdlvnc rtneiitgat
     1021 vgdfwdgfed vpnrlkneke pmvlklkdwp pgedfrdmmp srfddlmani plpeytrrdg
     1081 klnlasrlpn yfvrpdlgpk mynayglitp edrkygttnl hldvsdaanv mvyvgipkgq
     1141 cdqeeevlkt iqdgdsdelt ikrfiegkek pgalwhiyaa kdtekirefl kkvseeqgqe
     1201 npadhdpihd qswyldrslr krlqqeygvq gwaivqflgd vvfipagaph qvhnlyscik
     1261 vaedfvspeh vkhcfwltqe frylsqthtn hedklqvknv iyhavkdava mlkasessfg
     1321 kp
//
LOCUS       XP_061011272            1322 aa            linear   MAM 02-DEC-2023
DEFINITION  lysine-specific demethylase 3A isoform X1 [Dama dama].
ACCESSION   XP_061011272
VERSION     XP_061011272.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155289.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1322
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1322
                     /product="lysine-specific demethylase 3A isoform X1"
                     /calculated_mol_wt=147565
     Region          1065..1135
                     /region_name="JmjC"
                     /note="A domain family that is part of the cupin
                     metalloenzyme superfamily; smart00558"
                     /db_xref="CDD:214721"
     Region          1152..1265
                     /region_name="JmjC"
                     /note="JmjC domain, hydroxylase; pfam02373"
                     /db_xref="CDD:396791"
     CDS             1..1322
                     /gene="KDM3A"
                     /coded_by="XM_061155289.1:136..4104"
                     /db_xref="GeneID:133064815"
ORIGIN      
        1 mvltlgeswp vlvgkrflsl saadggdggh dswdvervae wpwlsgtira vshtdvtkkd
       61 lkvcvefdge swrkrrwidv ysllrraflv ehnlvlaerk speiserivq wpaimyksll
      121 dkaglgsits irflgdqqrv flskdllkpi qdvnnlrlsl mdnqsvskef qalivkhlde
      181 shllqgdknl vgsevkiysl dpstqwfsat ivngnptskt lqvnceeipa lkivdpslih
      241 vevvhdnfvt cgnstrmgav krkssenngn lvskqakscs easpsvcpvq svpttvfkei
      301 llgctaatpp skdprqqstp qaansppnlg akipqgchkq ilpelsscln tkpeilrtkp
      361 dvackvells skssqigtgd lktlsepkgn csqlktstde essveslpps tdspkecvpt
      421 kassmaelei tntpelqkhf ehapstsdvl skkpeekaav ssnspngcie krgepstlgc
      481 qsqnikassa kvdpescctr snnkfqnaps rksvltdpak lkklqqsgea fvqddscvni
      541 vaqlpkcrec rldslrkdke pqkdspvfcr ffhfrrlqfn khgvlrvegf ltpnkydsea
      601 iglwlpltrn vvgtdldtak yilanigdhf cqmvisekea mstiephrqv awkravkgvr
      661 emcdvcdtti fnlhwvcprc gfgvcvdcyr mkrkncqqga ayktfnwlrc vksqihepen
      721 lmptqiipgk alydvgdivh svrakwgika ncpcsnrqfk lfskpasked ikqtsltgek
      781 atlgtmlqqn psglepvtvg geaaskpass vkptcpasts plnwladlts gnvnkenkek
      841 qpampvlkne ikclpplppl sksstvlhtf nstiltpvsn nnsgflrnll nsstgkteng
      901 lkntpkildd ifaslvqnkt csdlskrpqg ltikpsilgf dtphywlcdn rllclqdpnn
      961 ksnwnvfrec wkqgqpvmvs gvhhklntel wkpesfrref gnqevdlvnc rtneiitgat
     1021 vgdfwdgfed vpnrlkneke pmvlklkdwp pgedfrdmmp srfddlmani plpeytrrdg
     1081 klnlasrlpn yfvrpdlgpk mynayglitp edrkygttnl hldvsdaanv mvyvgipkgq
     1141 cdqeeevlkt iqdgdsdelt ikrfiegkek pgalwhiyaa kdtekirefl kkvseeqgqe
     1201 npadhdpihd qswyldrslr krlqqeygvq gwaivqflgd vvfipagaph qvhnlyscik
     1261 vaedfvspeh vkhcfwltqe frylsqthtn hedklqvknv iyhavkdava mlkasessfg
     1321 kp
//
LOCUS       XP_061011273            1322 aa            linear   MAM 02-DEC-2023
DEFINITION  lysine-specific demethylase 3A isoform X1 [Dama dama].
ACCESSION   XP_061011273
VERSION     XP_061011273.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155290.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1322
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1322
                     /product="lysine-specific demethylase 3A isoform X1"
                     /calculated_mol_wt=147565
     Region          1065..1135
                     /region_name="JmjC"
                     /note="A domain family that is part of the cupin
                     metalloenzyme superfamily; smart00558"
                     /db_xref="CDD:214721"
     Region          1152..1265
                     /region_name="JmjC"
                     /note="JmjC domain, hydroxylase; pfam02373"
                     /db_xref="CDD:396791"
     CDS             1..1322
                     /gene="KDM3A"
                     /coded_by="XM_061155290.1:48..4016"
                     /db_xref="GeneID:133064815"
ORIGIN      
        1 mvltlgeswp vlvgkrflsl saadggdggh dswdvervae wpwlsgtira vshtdvtkkd
       61 lkvcvefdge swrkrrwidv ysllrraflv ehnlvlaerk speiserivq wpaimyksll
      121 dkaglgsits irflgdqqrv flskdllkpi qdvnnlrlsl mdnqsvskef qalivkhlde
      181 shllqgdknl vgsevkiysl dpstqwfsat ivngnptskt lqvnceeipa lkivdpslih
      241 vevvhdnfvt cgnstrmgav krkssenngn lvskqakscs easpsvcpvq svpttvfkei
      301 llgctaatpp skdprqqstp qaansppnlg akipqgchkq ilpelsscln tkpeilrtkp
      361 dvackvells skssqigtgd lktlsepkgn csqlktstde essveslpps tdspkecvpt
      421 kassmaelei tntpelqkhf ehapstsdvl skkpeekaav ssnspngcie krgepstlgc
      481 qsqnikassa kvdpescctr snnkfqnaps rksvltdpak lkklqqsgea fvqddscvni
      541 vaqlpkcrec rldslrkdke pqkdspvfcr ffhfrrlqfn khgvlrvegf ltpnkydsea
      601 iglwlpltrn vvgtdldtak yilanigdhf cqmvisekea mstiephrqv awkravkgvr
      661 emcdvcdtti fnlhwvcprc gfgvcvdcyr mkrkncqqga ayktfnwlrc vksqihepen
      721 lmptqiipgk alydvgdivh svrakwgika ncpcsnrqfk lfskpasked ikqtsltgek
      781 atlgtmlqqn psglepvtvg geaaskpass vkptcpasts plnwladlts gnvnkenkek
      841 qpampvlkne ikclpplppl sksstvlhtf nstiltpvsn nnsgflrnll nsstgkteng
      901 lkntpkildd ifaslvqnkt csdlskrpqg ltikpsilgf dtphywlcdn rllclqdpnn
      961 ksnwnvfrec wkqgqpvmvs gvhhklntel wkpesfrref gnqevdlvnc rtneiitgat
     1021 vgdfwdgfed vpnrlkneke pmvlklkdwp pgedfrdmmp srfddlmani plpeytrrdg
     1081 klnlasrlpn yfvrpdlgpk mynayglitp edrkygttnl hldvsdaanv mvyvgipkgq
     1141 cdqeeevlkt iqdgdsdelt ikrfiegkek pgalwhiyaa kdtekirefl kkvseeqgqe
     1201 npadhdpihd qswyldrslr krlqqeygvq gwaivqflgd vvfipagaph qvhnlyscik
     1261 vaedfvspeh vkhcfwltqe frylsqthtn hedklqvknv iyhavkdava mlkasessfg
     1321 kp
//
LOCUS       XP_061011274            1321 aa            linear   MAM 02-DEC-2023
DEFINITION  lysine-specific demethylase 3A isoform X2 [Dama dama].
ACCESSION   XP_061011274
VERSION     XP_061011274.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155291.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1321
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1321
                     /product="lysine-specific demethylase 3A isoform X2"
                     /calculated_mol_wt=147436
     Region          1065..1135
                     /region_name="JmjC"
                     /note="A domain family that is part of the cupin
                     metalloenzyme superfamily; smart00558"
                     /db_xref="CDD:214721"
     Region          1151..1264
                     /region_name="JmjC"
                     /note="JmjC domain, hydroxylase; pfam02373"
                     /db_xref="CDD:396791"
     CDS             1..1321
                     /gene="KDM3A"
                     /coded_by="XM_061155291.1:179..4144"
                     /db_xref="GeneID:133064815"
ORIGIN      
        1 mvltlgeswp vlvgkrflsl saadggdggh dswdvervae wpwlsgtira vshtdvtkkd
       61 lkvcvefdge swrkrrwidv ysllrraflv ehnlvlaerk speiserivq wpaimyksll
      121 dkaglgsits irflgdqqrv flskdllkpi qdvnnlrlsl mdnqsvskef qalivkhlde
      181 shllqgdknl vgsevkiysl dpstqwfsat ivngnptskt lqvnceeipa lkivdpslih
      241 vevvhdnfvt cgnstrmgav krkssenngn lvskqakscs easpsvcpvq svpttvfkei
      301 llgctaatpp skdprqqstp qaansppnlg akipqgchkq ilpelsscln tkpeilrtkp
      361 dvackvells skssqigtgd lktlsepkgn csqlktstde essveslpps tdspkecvpt
      421 kassmaelei tntpelqkhf ehapstsdvl skkpeekaav ssnspngcie krgepstlgc
      481 qsqnikassa kvdpescctr snnkfqnaps rksvltdpak lkklqqsgea fvqddscvni
      541 vaqlpkcrec rldslrkdke pqkdspvfcr ffhfrrlqfn khgvlrvegf ltpnkydsea
      601 iglwlpltrn vvgtdldtak yilanigdhf cqmvisekea mstiephrqv awkravkgvr
      661 emcdvcdtti fnlhwvcprc gfgvcvdcyr mkrkncqqga ayktfnwlrc vksqihepen
      721 lmptqiipgk alydvgdivh svrakwgika ncpcsnrqfk lfskpasked ikqtsltgek
      781 atlgtmlqqn psglepvtvg geaaskpass vkptcpasts plnwladlts gnvnkenkek
      841 qpampvlkne ikclpplppl sksstvlhtf nstiltpvsn nnsgflrnll nsstgkteng
      901 lkntpkildd ifaslvqnkt csdlskrpqg ltikpsilgf dtphywlcdn rllclqdpnn
      961 ksnwnvfrec wkqgqpvmvs gvhhklntel wkpesfrref gnqevdlvnc rtneiitgat
     1021 vgdfwdgfed vpnrlkneke pmvlklkdwp pgedfrdmmp srfddlmani plpeytrrdg
     1081 klnlasrlpn yfvrpdlgpk mynayglitp edrkygttnl hldvsdaanv mvyvgipkgq
     1141 cdqeevlkti qdgdsdelti krfiegkekp galwhiyaak dtekireflk kvseeqgqen
     1201 padhdpihdq swyldrslrk rlqqeygvqg waivqflgdv vfipagaphq vhnlyscikv
     1261 aedfvspehv khcfwltqef rylsqthtnh edklqvknvi yhavkdavam lkasessfgk
     1321 p
//
LOCUS       XP_061011275            1306 aa            linear   MAM 02-DEC-2023
DEFINITION  lysine-specific demethylase 3A isoform X3 [Dama dama].
ACCESSION   XP_061011275
VERSION     XP_061011275.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155292.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1306
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1306
                     /product="lysine-specific demethylase 3A isoform X3"
                     /calculated_mol_wt=145728
     Region          1049..1119
                     /region_name="JmjC"
                     /note="A domain family that is part of the cupin
                     metalloenzyme superfamily; smart00558"
                     /db_xref="CDD:214721"
     Region          1136..1249
                     /region_name="JmjC"
                     /note="JmjC domain, hydroxylase; pfam02373"
                     /db_xref="CDD:396791"
     CDS             1..1306
                     /gene="KDM3A"
                     /coded_by="XM_061155292.1:179..4099"
                     /db_xref="GeneID:133064815"
ORIGIN      
        1 mvltlgeswp vlvgkrflsl saadggdggh dswdvervae wpwlsgtira vshtdvtkkd
       61 lkvcvefdge swrkrrwidv ysllrraflv ehnlvlaerk speiserivq wpaimyksll
      121 dkaglgsits irflgdqqrv flskdllkpi qdvnnlrlsl mdnqsvskef qalivkhlde
      181 shllqgdknl vgsevkiysl dpstqwfsat ivngnptskt lqvnceeipa lkivdpslih
      241 vevvhdnfvt cgnstrmgav krkssenngn lvskqakscs easpsvcpvq svpttvfkei
      301 llgctaatpp skdprqqstp qaansppnlg akipqgchkq ilpelsscln tkpeilrtkp
      361 dvackvells skssqigtgd lktlsepkgn csqlktstde essveslpps tdspkecvpt
      421 kassmaelei tntpelqkhf ehapstsdvl skkpeekaav ssnspngcie krgepstlgc
      481 qsqnikassa kvdpescctr snnkfqnaps rksvltdpak lkklqqsgea fvqddscvni
      541 vaqlpkcrec rldslrkdke pqkdspvfcr ffhfrrlqfn khgvlrvegf ltpnkydsea
      601 iglwlpltrn vvgtdldtak yilanigdhf cqmvawkrav kgvremcdvc dttifnlhwv
      661 cprcgfgvcv dcyrmkrknc qqgaayktfn wlrcvksqih epenlmptqi ipgkalydvg
      721 divhsvrakw gikancpcsn rqfklfskpa skedikqtsl tgekatlgtm lqqnpsglep
      781 vtvggeaask passvkptcp astsplnwla dltsgnvnke nkekqpampv lkneikclpp
      841 lpplsksstv lhtfnstilt pvsnnnsgfl rnllnsstgk tenglkntpk ilddifaslv
      901 qnktcsdlsk rpqgltikps ilgfdtphyw lcdnrllclq dpnnksnwnv frecwkqgqp
      961 vmvsgvhhkl ntelwkpesf rrefgnqevd lvncrtneii tgatvgdfwd gfedvpnrlk
     1021 nekepmvlkl kdwppgedfr dmmpsrfddl maniplpeyt rrdgklnlas rlpnyfvrpd
     1081 lgpkmynayg litpedrkyg ttnlhldvsd aanvmvyvgi pkgqcdqeee vlktiqdgds
     1141 deltikrfie gkekpgalwh iyaakdteki reflkkvsee qgqenpadhd pihdqswyld
     1201 rslrkrlqqe ygvqgwaivq flgdvvfipa gaphqvhnly scikvaedfv spehvkhcfw
     1261 ltqefrylsq thtnhedklq vknviyhavk davamlkase ssfgkp
//
LOCUS       XP_061011276             685 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase RNF103 isoform X1 [Dama dama].
ACCESSION   XP_061011276
VERSION     XP_061011276.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155293.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..685
                     /product="E3 ubiquitin-protein ligase RNF103 isoform X1"
                     /calculated_mol_wt=79342
     Region          615..669
                     /region_name="RING-H2_RNF103"
                     /note="RING finger, H2 subclass, found in RING finger
                     protein 103 (RNF103) and similar proteins; cd16473"
                     /db_xref="CDD:438136"
     CDS             1..685
                     /gene="LOC133064816"
                     /coded_by="XM_061155293.1:525..2582"
                     /db_xref="GeneID:133064816"
ORIGIN      
        1 mwlklfflll yflvlfvlar ffeaivwyet gifatqlvdp valsfkklkt ilecrglgys
       61 glpekkdvre lveksgdlme gelysalkee easesvsstn fsgemhfyel vedtkdgiwl
      121 vqviandrsp lvgkihwekm vkkvsrfgir tgtfncssdp rycrrrgwvr stlimsvpqt
      181 stskgkvmlk eysgrkieve hifkwitaha asriktiyna erlkeewnks dqywikiylf
      241 anldqppaff salsikftgr vefifvnvek wdnksymtdi gvynmpsyil rtpegiyryg
      301 nhtgeyislq amdsflrslq pevndlfvls lvlvnlmawm dlfitqgati krfvvlistl
      361 gtynslliis wlpvlgflql pyldsfyeys lkllrysntt tlaswvradw mfysshpalf
      421 lstylghgll idyfekkrrr ninsdevnan nlewlsslwd wytsylfhpi asfqnfpves
      481 dwdedpdlfl erlafpdlwl hpliptdyik nlpiwrfkcl gvqseeemse gsqdiendsd
      541 sestdtlsse kevfedklsi ihsspgrash cdaeacscan kycqtspyer kgrsygsyst
      601 nedmepdwlt wpadmlhcte cvvclenfen gcllmglpcg hvfhqncivm wlaggrhccp
      661 vcrwpsykkk qpyaqhqpls ndfps
//
LOCUS       XP_061011277             222 aa            linear   MAM 02-DEC-2023
DEFINITION  charged multivesicular body protein 3 isoform X2 [Dama dama].
ACCESSION   XP_061011277
VERSION     XP_061011277.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155294.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..222
                     /product="charged multivesicular body protein 3 isoform
                     X2"
                     /calculated_mol_wt=24914
     Region          18..187
                     /region_name="Snf7"
                     /note="pfam03357"
                     /db_xref="CDD:460896"
     CDS             1..222
                     /gene="LOC133064816"
                     /coded_by="XM_061155294.1:170..838"
                     /db_xref="GeneID:133064816"
ORIGIN      
        1 mglfgktqek ppkelvnews lkirkemrvv drqirdiqre eekvkrsvkd aakkgqrdvc
       61 vvlakemirs rkavsklyas kahmnsvlmg mknqlavlrv agslqkstev mkamqslvki
      121 peiqatmrel skemmkagii eemledtfes mddqeemeea aemeidrilf eitagalgka
      181 pskvtdalpe pepigamaas edeeeeeeal eamqsrlatl rs
//
LOCUS       XP_061011278             329 aa            linear   MAM 02-DEC-2023
DEFINITION  charged multivesicular body protein 3 isoform X3 [Dama dama].
ACCESSION   XP_061011278
VERSION     XP_061011278.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155295.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..329
                     /product="charged multivesicular body protein 3 isoform
                     X3"
                     /calculated_mol_wt=37287
     Region          125..294
                     /region_name="Snf7"
                     /note="pfam03357"
                     /db_xref="CDD:460896"
     CDS             1..329
                     /gene="LOC133064816"
                     /coded_by="XM_061155295.1:472..1461"
                     /db_xref="GeneID:133064816"
ORIGIN      
        1 mwlklfflll yflvlfvlar ffeaivwyet gifatqlvdp valsfkklkt ilecrglgys
       61 glpekkdvre lveksgdlme gelysalkee easesvsstn fsgemhfyel vedtkdgiwl
      121 vqvnewslki rkemrvvdrq irdiqreeek vkrsvkdaak kgqrdvcvvl akemirsrka
      181 vsklyaskah mnsvlmgmkn qlavlrvags lqkstevmka mqslvkipei qatmrelske
      241 mmkagiieem ledtfesmdd qeemeeaaem eidrilfeit agalgkapsk vtdalpepep
      301 igamaasede eeeeealeam qsrlatlrs
//
LOCUS       XP_061011279             391 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein transferase RMND5A [Dama dama].
ACCESSION   XP_061011279
VERSION     XP_061011279.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155296.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..391
                     /product="E3 ubiquitin-protein transferase RMND5A"
                     /calculated_mol_wt=43862
     Region          17..391
                     /region_name="COG5109"
                     /note="Uncharacterized conserved protein, contains RING
                     Zn-finger [General function prediction only]"
                     /db_xref="CDD:227440"
     Region          153..297
                     /region_name="CTLH"
                     /note="CTLH/CRA C-terminal to LisH motif domain;
                     pfam10607"
                     /db_xref="CDD:402305"
     CDS             1..391
                     /gene="RMND5A"
                     /coded_by="XM_061155296.1:149..1324"
                     /db_xref="GeneID:133064818"
ORIGIN      
        1 mdqcvtvere lekvlhkfsg ygqlcergle elidytgglk heilqshgqd aelsgtlslv
       61 ltqcckrikd tvqklasdhk dihssvsrvg kaidknfdsd issvgidgcw qadsqrllne
      121 vmvehffrqg mldvaeelcq esglsvdpsq kepfvelnri lealkvrvlr palewavsnr
      181 emliaqnssl efklhrlyfi sllmggttnq realqyaknf qpfalnhqkd iqvlmgslvy
      241 lrqgienspy vhlldanqwa dicdiftrda callglsves plsvsfsagc valpalinik
      301 avieqrqctg vwnqkdelpi evdlgkkcwy hsifacpilr qqttdnnppm klvcghiisr
      361 dalnkmfngs klkcpycpme qspgdakqif f
//
LOCUS       XP_061011280             242 aa            linear   MAM 02-DEC-2023
DEFINITION  T-cell surface glycoprotein CD8 alpha chain [Dama dama].
ACCESSION   XP_061011280
VERSION     XP_061011280.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155297.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..242
                     /product="T-cell surface glycoprotein CD8 alpha chain"
                     /calculated_mol_wt=26471
     Region          28..138
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          43..47
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          57..61
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          103..107
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          117..122
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          131..134
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..242
                     /gene="CD8A"
                     /coded_by="XM_061155297.1:412..1140"
                     /db_xref="GeneID:133064819"
ORIGIN      
        1 maslltalil plallllhat tvlgslsfrm spttketrlg ekvelqcell qsgmasgcsw
       61 lrqipgddpr piflmylsgq rpklaegldp khisgskvts srfqltlssf rqedqgyyfc
      121 svlsnsilyf snfipvflpa kpattpamrp straptiapq trsvsprsev crpsagsaad
      181 tsrldfacdi yiwaplvgtc avlllslvit gicyrrnrrr vckcprpmvr qggkpspsek
      241 yv
//
LOCUS       XP_061011281             211 aa            linear   MAM 02-DEC-2023
DEFINITION  T-cell surface glycoprotein CD8 beta chain [Dama dama].
ACCESSION   XP_061011281
VERSION     XP_061011281.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155298.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..211
                     /product="T-cell surface glycoprotein CD8 beta chain"
                     /calculated_mol_wt=23038
     Region          22..135
                     /region_name="IgV_CD8_beta"
                     /note="Immunoglobulin (Ig) variable (V) domain of Cluster
                     of Differentiation (CD) 8 beta chain; cd07700"
                     /db_xref="CDD:409497"
     Region          22..42
                     /region_name="FR1"
                     /note="FR1 [structural motif]"
                     /db_xref="CDD:409497"
     Region          22..25
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409497"
     Region          28..32
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409497"
     Region          35..43
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409497"
     Region          43..50
                     /region_name="CDR1"
                     /note="CDR1 [structural motif]"
                     /db_xref="CDD:409497"
     Region          51..59
                     /region_name="FR2"
                     /note="FR2 [structural motif]"
                     /db_xref="CDD:409497"
     Region          51..59
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409497"
     Site            order(53,57,67,69,119,126..127)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:409497"
     Region          64..84
                     /region_name="CDR2"
                     /note="CDR2 [structural motif]"
                     /db_xref="CDD:409497"
     Region          65..74
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409497"
     Region          78..83
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409497"
     Region          90..118
                     /region_name="FR3"
                     /note="FR3 [structural motif]"
                     /db_xref="CDD:409497"
     Region          90..95
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409497"
     Region          112..119
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409497"
     Region          119..123
                     /region_name="CDR3"
                     /note="CDR3 [structural motif]"
                     /db_xref="CDD:409497"
     Region          124..135
                     /region_name="FR4"
                     /note="FR4 [structural motif]"
                     /db_xref="CDD:409497"
     Region          124..135
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409497"
     CDS             1..211
                     /gene="CD8B"
                     /coded_by="XM_061155298.1:48..683"
                     /db_xref="GeneID:133064820"
ORIGIN      
        1 mqarlwllla aqlaalhgsl vlqqtpaslm vqtnqtvtls cktetspstt riywlrqrqa
       61 lsanshyefl acwvsvnktv ygkgveqekl tvlgnspgnl lklqsvkpad sgvyfcmtvg
      121 vpnlifgkgt qlsvvdvlpt spqptrktst pkkkvcrfps pvtrkglsca pliigllvaa
      181 vlillvslgv aihlrclqrr arlrllkqfy k
//
LOCUS       XP_061011282             265 aa            linear   MAM 02-DEC-2023
DEFINITION  lysine-rich coiled-coil protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061011282
VERSION     XP_061011282.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155299.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..265
                     /product="lysine-rich coiled-coil protein 1 isoform X1"
                     /calculated_mol_wt=31351
     CDS             1..265
                     /gene="KRCC1"
                     /coded_by="XM_061155299.1:317..1114"
                     /db_xref="GeneID:133064821"
ORIGIN      
        1 mreslvklmk hskktydsfq deledyikvq karglepktc frkmredyle tygykeevds
       61 rprcrmfeqr lpygtvqtyp rscsisqrve kqlpqwlpah dsrlrldsls csqvtrdcfs
      121 gkpvppnlsq hesncsaysv esgvyrhlss enstsahqas ykhihqkrkr hteegrekpe
      181 eerpkhkrkk aceeidldky ksiqtsktea etvrvstekl knrkekksrd vaskkeerkr
      241 rkekkeqgqe rteeemlwdq silgf
//
LOCUS       XP_061011283             257 aa            linear   MAM 02-DEC-2023
DEFINITION  lysine-rich coiled-coil protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061011283
VERSION     XP_061011283.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155300.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..257
                     /product="lysine-rich coiled-coil protein 1 isoform X2"
                     /calculated_mol_wt=30394
     CDS             1..257
                     /gene="KRCC1"
                     /coded_by="XM_061155300.1:686..1459"
                     /db_xref="GeneID:133064821"
ORIGIN      
        1 mkhskktyds fqdeledyik vqkarglepk tcfrkmredy letygykeev dsrprcrmfe
       61 qrlpygtvqt yprscsisqr vekqlpqwlp ahdsrlrlds lscsqvtrdc fsgkpvppnl
      121 sqhesncsay svesgvyrhl ssenstsahq asykhihqkr krhteegrek peeerpkhkr
      181 kkaceeidld kyksiqtskt eaetvrvste klknrkekks rdvaskkeer krrkekkeqg
      241 qerteeemlw dqsilgf
//
LOCUS       XP_061011284             257 aa            linear   MAM 02-DEC-2023
DEFINITION  lysine-rich coiled-coil protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061011284
VERSION     XP_061011284.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155301.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..257
                     /product="lysine-rich coiled-coil protein 1 isoform X2"
                     /calculated_mol_wt=30394
     CDS             1..257
                     /gene="KRCC1"
                     /coded_by="XM_061155301.1:650..1423"
                     /db_xref="GeneID:133064821"
ORIGIN      
        1 mkhskktyds fqdeledyik vqkarglepk tcfrkmredy letygykeev dsrprcrmfe
       61 qrlpygtvqt yprscsisqr vekqlpqwlp ahdsrlrlds lscsqvtrdc fsgkpvppnl
      121 sqhesncsay svesgvyrhl ssenstsahq asykhihqkr krhteegrek peeerpkhkr
      181 kkaceeidld kyksiqtskt eaetvrvste klknrkekks rdvaskkeer krrkekkeqg
      241 qerteeemlw dqsilgf
//
LOCUS       XP_061011285             257 aa            linear   MAM 02-DEC-2023
DEFINITION  lysine-rich coiled-coil protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061011285
VERSION     XP_061011285.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155302.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..257
                     /product="lysine-rich coiled-coil protein 1 isoform X2"
                     /calculated_mol_wt=30394
     CDS             1..257
                     /gene="KRCC1"
                     /coded_by="XM_061155302.1:453..1226"
                     /db_xref="GeneID:133064821"
ORIGIN      
        1 mkhskktyds fqdeledyik vqkarglepk tcfrkmredy letygykeev dsrprcrmfe
       61 qrlpygtvqt yprscsisqr vekqlpqwlp ahdsrlrlds lscsqvtrdc fsgkpvppnl
      121 sqhesncsay svesgvyrhl ssenstsahq asykhihqkr krhteegrek peeerpkhkr
      181 kkaceeidld kyksiqtskt eaetvrvste klknrkekks rdvaskkeer krrkekkeqg
      241 qerteeemlw dqsilgf
//
LOCUS       XP_061011286             257 aa            linear   MAM 02-DEC-2023
DEFINITION  lysine-rich coiled-coil protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061011286
VERSION     XP_061011286.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155303.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..257
                     /product="lysine-rich coiled-coil protein 1 isoform X2"
                     /calculated_mol_wt=30394
     CDS             1..257
                     /gene="KRCC1"
                     /coded_by="XM_061155303.1:490..1263"
                     /db_xref="GeneID:133064821"
ORIGIN      
        1 mkhskktyds fqdeledyik vqkarglepk tcfrkmredy letygykeev dsrprcrmfe
       61 qrlpygtvqt yprscsisqr vekqlpqwlp ahdsrlrlds lscsqvtrdc fsgkpvppnl
      121 sqhesncsay svesgvyrhl ssenstsahq asykhihqkr krhteegrek peeerpkhkr
      181 kkaceeidld kyksiqtskt eaetvrvste klknrkekks rdvaskkeer krrkekkeqg
      241 qerteeemlw dqsilgf
//
LOCUS       XP_061011287             257 aa            linear   MAM 02-DEC-2023
DEFINITION  lysine-rich coiled-coil protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061011287
VERSION     XP_061011287.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155304.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..257
                     /product="lysine-rich coiled-coil protein 1 isoform X2"
                     /calculated_mol_wt=30394
     CDS             1..257
                     /gene="KRCC1"
                     /coded_by="XM_061155304.1:609..1382"
                     /db_xref="GeneID:133064821"
ORIGIN      
        1 mkhskktyds fqdeledyik vqkarglepk tcfrkmredy letygykeev dsrprcrmfe
       61 qrlpygtvqt yprscsisqr vekqlpqwlp ahdsrlrlds lscsqvtrdc fsgkpvppnl
      121 sqhesncsay svesgvyrhl ssenstsahq asykhihqkr krhteegrek peeerpkhkr
      181 kkaceeidld kyksiqtskt eaetvrvste klknrkekks rdvaskkeer krrkekkeqg
      241 qerteeemlw dqsilgf
//
LOCUS       XP_061011288             484 aa            linear   MAM 02-DEC-2023
DEFINITION  threonine synthase-like 2 isoform X1 [Dama dama].
ACCESSION   XP_061011288
VERSION     XP_061011288.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155305.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..484
                     /product="threonine synthase-like 2 isoform X1"
                     /calculated_mol_wt=54046
     Region          2..464
                     /region_name="Thr-synth_2"
                     /note="Threonine synthase catalyzes the final step of
                     threonine biosynthesis. The conversion of
                     O-phosphohomoserine into threonine and inorganic phosphate
                     is pyridoxal 5'-phosphate dependent. The Thr-synth_1 CD
                     includes members from higher plants, cyanobacteria;
                     cd01560"
                     /db_xref="CDD:107203"
     Site            order(113,261..262,418)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]"
                     /db_xref="CDD:107203"
     Site            113
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:107203"
     CDS             1..484
                     /gene="THNSL2"
                     /coded_by="XM_061155305.1:369..1823"
                     /db_xref="GeneID:133064824"
ORIGIN      
        1 mwyvstrgia pridfegalf sgyapdggly mpeelpqlgr etlrewstls ypslvkelcs
       61 lfigpelipr ddlndlidra fsrfrhrevv hlsrlrngln vlelwhgvty afkdmslcca
      121 aqflqyflqk rkrhitvvvg tsgdtgsaai esvhgaknvd livllpkghc tkiqelqmtt
      181 vlrenvhvfg vegnsdelde piktvfadva fvkkhnlmsl nsinwsrvlv qiahhffayf
      241 rcapsldthp lppvevvvpt gaagnlaagc iaqkmglpih lvvavnsndi ihravqwgdf
      301 slskavkptl asamdiqvpy nmerifwlls gsdsqviral meqfertksv glpkelhskl
      361 aeavtsqsvs deaitqtmgr cwqenkyllc phsavavsch yrqvdrqqps pprcclapas
      421 aakfpeavra arltldtpae ilalehketr ctpmrkgddw trmlrdtied lsqqwqgrvq
      481 nlpa
//
LOCUS       XP_061011289             484 aa            linear   MAM 02-DEC-2023
DEFINITION  threonine synthase-like 2 isoform X1 [Dama dama].
ACCESSION   XP_061011289
VERSION     XP_061011289.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155306.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..484
                     /product="threonine synthase-like 2 isoform X1"
                     /calculated_mol_wt=54046
     Region          2..464
                     /region_name="Thr-synth_2"
                     /note="Threonine synthase catalyzes the final step of
                     threonine biosynthesis. The conversion of
                     O-phosphohomoserine into threonine and inorganic phosphate
                     is pyridoxal 5'-phosphate dependent. The Thr-synth_1 CD
                     includes members from higher plants, cyanobacteria;
                     cd01560"
                     /db_xref="CDD:107203"
     Site            order(113,261..262,418)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]"
                     /db_xref="CDD:107203"
     Site            113
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:107203"
     CDS             1..484
                     /gene="THNSL2"
                     /coded_by="XM_061155306.1:126..1580"
                     /db_xref="GeneID:133064824"
ORIGIN      
        1 mwyvstrgia pridfegalf sgyapdggly mpeelpqlgr etlrewstls ypslvkelcs
       61 lfigpelipr ddlndlidra fsrfrhrevv hlsrlrngln vlelwhgvty afkdmslcca
      121 aqflqyflqk rkrhitvvvg tsgdtgsaai esvhgaknvd livllpkghc tkiqelqmtt
      181 vlrenvhvfg vegnsdelde piktvfadva fvkkhnlmsl nsinwsrvlv qiahhffayf
      241 rcapsldthp lppvevvvpt gaagnlaagc iaqkmglpih lvvavnsndi ihravqwgdf
      301 slskavkptl asamdiqvpy nmerifwlls gsdsqviral meqfertksv glpkelhskl
      361 aeavtsqsvs deaitqtmgr cwqenkyllc phsavavsch yrqvdrqqps pprcclapas
      421 aakfpeavra arltldtpae ilalehketr ctpmrkgddw trmlrdtied lsqqwqgrvq
      481 nlpa
//
LOCUS       XP_061011290             442 aa            linear   MAM 02-DEC-2023
DEFINITION  threonine synthase-like 2 isoform X2 [Dama dama].
ACCESSION   XP_061011290
VERSION     XP_061011290.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155307.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..442
                     /product="threonine synthase-like 2 isoform X2"
                     /calculated_mol_wt=49143
     Region          2..422
                     /region_name="Thr-synth_2"
                     /note="Threonine synthase catalyzes the final step of
                     threonine biosynthesis. The conversion of
                     O-phosphohomoserine into threonine and inorganic phosphate
                     is pyridoxal 5'-phosphate dependent. The Thr-synth_1 CD
                     includes members from higher plants, cyanobacteria;
                     cd01560"
                     /db_xref="CDD:107203"
     Site            order(113,261..262,376)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]"
                     /db_xref="CDD:107203"
     Site            113
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:107203"
     CDS             1..442
                     /gene="THNSL2"
                     /coded_by="XM_061155307.1:369..1697"
                     /db_xref="GeneID:133064824"
ORIGIN      
        1 mwyvstrgia pridfegalf sgyapdggly mpeelpqlgr etlrewstls ypslvkelcs
       61 lfigpelipr ddlndlidra fsrfrhrevv hlsrlrngln vlelwhgvty afkdmslcca
      121 aqflqyflqk rkrhitvvvg tsgdtgsaai esvhgaknvd livllpkghc tkiqelqmtt
      181 vlrenvhvfg vegnsdelde piktvfadva fvkkhnlmsl nsinwsrvlv qiahhffayf
      241 rcapsldthp lppvevvvpt gaagnlaagc iaqkmglpih lvvavnsndi ihravqwgdf
      301 slskavkptl asamdiqlae avtsqsvsde aitqtmgrcw qenkyllcph savavschyr
      361 qvdrqqpspp rcclapasaa kfpeavraar ltldtpaeil alehketrct pmrkgddwtr
      421 mlrdtiedls qqwqgrvqnl pa
//
LOCUS       XP_061011291             419 aa            linear   MAM 02-DEC-2023
DEFINITION  threonine synthase-like 2 isoform X3 [Dama dama].
ACCESSION   XP_061011291
VERSION     XP_061011291.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155308.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..419
                     /product="threonine synthase-like 2 isoform X3"
                     /calculated_mol_wt=46261
     Region          2..399
                     /region_name="Trp-synth-beta_II"
                     /note="Tryptophan synthase beta superfamily (fold type
                     II); this family of pyridoxal phosphate (PLP)-dependent
                     enzymes catalyzes beta-replacement and beta-elimination
                     reactions. This CD corresponds to
                     aminocyclopropane-1-carboxylate deaminase (ACCD),
                     tryptophan...; cl00342"
                     /db_xref="CDD:444852"
     Site            order(79,196..200,327,353..354)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:107203"
     CDS             1..419
                     /gene="THNSL2"
                     /coded_by="XM_061155308.1:369..1628"
                     /db_xref="GeneID:133064824"
ORIGIN      
        1 mwyvstrgia pridfegalf sgyapdggly mpeelpqlgr etlrewstls ypslvkelcs
       61 lfigpelipr ddlngtsgdt gsaaiesvhg aknvdlivll pkghctkiqe lqmttvlren
      121 vhvfgvegns deldepiktv fadvafvkkh nlmslnsinw srvlvqiahh ffayfrcaps
      181 ldthplppve vvvptgaagn laagciaqkm glpihlvvav nsndiihrav qwgdfslska
      241 vkptlasamd iqvpynmeri fwllsgsdsq viralmeqfe rtksvglpke lhsklaeavt
      301 sqsvsdeait qtmgrcwqen kyllcphsav avschyrqvd rqqpspprcc lapasaakfp
      361 eavraarltl dtpaeilale hketrctpmr kgddwtrmlr dtiedlsqqw qgrvqnlpa
//
LOCUS       XP_061011292             407 aa            linear   MAM 02-DEC-2023
DEFINITION  threonine synthase-like 2 isoform X4 [Dama dama].
ACCESSION   XP_061011292
VERSION     XP_061011292.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155309.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..407
                     /product="threonine synthase-like 2 isoform X4"
                     /calculated_mol_wt=45622
     Region          2..387
                     /region_name="Trp-synth-beta_II"
                     /note="Tryptophan synthase beta superfamily (fold type
                     II); this family of pyridoxal phosphate (PLP)-dependent
                     enzymes catalyzes beta-replacement and beta-elimination
                     reactions. This CD corresponds to
                     aminocyclopropane-1-carboxylate deaminase (ACCD),
                     tryptophan...; cl00342"
                     /db_xref="CDD:444852"
     Site            113
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:107203"
     CDS             1..407
                     /gene="THNSL2"
                     /coded_by="XM_061155309.1:369..1592"
                     /db_xref="GeneID:133064824"
ORIGIN      
        1 mwyvstrgia pridfegalf sgyapdggly mpeelpqlgr etlrewstls ypslvkelcs
       61 lfigpelipr ddlndlidra fsrfrhrevv hlsrlrngln vlelwhgvty afkdmslcca
      121 aqflqyflqk rkrhitvvvg tsgdtgsaai esvhgaknvd livllpkghc tkiqelqmtt
      181 vlrenvhvfg agciaqkmgl pihlvvavns ndiihravqw gdfslskavk ptlasamdiq
      241 vpynmerifw llsgsdsqvi ralmeqfert ksvglpkelh sklaeavtsq svsdeaitqt
      301 mgrcwqenky llcphsavav schyrqvdrq qpspprccla pasaakfpea vraarltldt
      361 paeilalehk etrctpmrkg ddwtrmlrdt iedlsqqwqg rvqnlpa
//
LOCUS       XP_061011293            1116 aa            linear   MAM 02-DEC-2023
DEFINITION  eukaryotic translation initiation factor 2-alpha kinase 3 [Dama
            dama].
ACCESSION   XP_061011293
VERSION     XP_061011293.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155310.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1116
                     /product="eukaryotic translation initiation factor 2-alpha
                     kinase 3"
                     /calculated_mol_wt=124458
     Region          105..421
                     /region_name="Luminal_EIF2AK3"
                     /note="The Luminal domain, a dimerization domain, of the
                     Serine/Threonine protein kinase, eukaryotic translation
                     Initiation Factor 2-Alpha Kinase 3; cd09768"
                     /db_xref="CDD:188874"
     Site            order(185..189,194,196..199,201..203,215,217..219,
                     240..241,249,251,266,268..270)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:188874"
     Region          587..>663
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Region          <874..1075
                     /region_name="STKc_EIF2AK3_PERK"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     eukaryotic translation Initiation Factor 2-Alpha Kinase 3
                     or PKR-like Endoplasmic Reticulum Kinase; cd14048"
                     /db_xref="CDD:270950"
     Site            order(954..963,965..989)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270950"
     Site            order(987..989,1020,1022..1029)
                     /site_type="other"
                     /note="eIF2alpha (substrate) binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270950"
     CDS             1..1116
                     /gene="EIF2AK3"
                     /coded_by="XM_061155310.1:176..3526"
                     /db_xref="GeneID:133064825"
ORIGIN      
        1 meratgpgsl aralllplll glvagtvaar rtsdllapta eaafglgaaa aptsatrvpa
       61 agaviaaevt vedsealpaa ageqeppepe pepeeepdir pcgrslviis tldgriaald
      121 penrgkkqwd ldvgsgslvs sslskpevfg nkmiipsldg dlfqwdrdre smetvpftve
      181 sllessykfg ddvvlvggks lttyglsays gkvryicsal gcrqwdndem eqeedilllq
      241 rtqktvravg prsgnekwnf svghfelryi pdmetragfi estlkpsgnk eqskiisdve
      301 eqeavmmdtv ikvsvadwkv mafnkkgghl eweyqfctpi asawlvkdgk vipislfddt
      361 syapndgvle deediveaar gatensvylg myrgqlylqs svrisekfpt spkalesvns
      421 enaiiplpii kwkplihsps rtpvlvgsde fdkclsndkf sheeysngal silqypydng
      481 yylpyykrer nkrstqitvr fldnpnykni rkkdpvlllh wwkeivgtiv fcivattfiv
      541 rrlfhphphr qrkesetqcq tenkydavsg eandsswndi knsgyvsryl tdfepiqcmg
      601 rggfgvvfea rnkvddcnya ikrirlpnre larekvmrev kalaklehpg ivryfnawle
      661 appekwqekm deiwlkddst dwplsspspv dapsvkirrm dpfstkerie iiapsphssr
      721 sfsvgiscgq tsssesqfsp lefsgmdhgn vsksadvvcq lqdscltdcd gedgtmdgnd
      781 eghsfelcps easlyvrsre rtsssivfed sgcdnasske eprmnqppvg nhyadkltal
      841 rhsgskspse ptvsvspsrp ttlsldltks svgklqpssp kvylyiqmql crkenlkdwl
      901 nsrctieare rsvclhiflq iaeaveflhs kglmhrdlkp snifftmddv vkvgdfglvt
      961 amdqdeedqm vltpmpgyar htgqvgtkly mspeqihgss yshkvdifsl glilfellyp
     1021 fgtqmervri ltdvrdlkfp plftqkypre yamvqdmlsp spterpeaas iienaifedl
     1081 efpgktvlrq rsrsmsssga khsrhsssph splpsn
//
LOCUS       XP_061011294             320 aa            linear   MAM 02-DEC-2023
DEFINITION  ribose-5-phosphate isomerase isoform X1 [Dama dama].
ACCESSION   XP_061011294
VERSION     XP_061011294.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155311.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..320
                     /product="ribose-5-phosphate isomerase isoform X1"
                     /calculated_mol_wt=34162
     Region          77..308
                     /region_name="RPI_A"
                     /note="Ribose 5-phosphate isomerase type A (RPI_A)
                     subfamily; RPI catalyzes the reversible conversion of
                     ribose-5-phosphate to ribulose 5-phosphate, the first step
                     of the non-oxidative branch of the pentose phosphate
                     pathway. This reaction leads to the...; cd01398"
                     /db_xref="CDD:238692"
     Site            order(100,129,146..147,156,158,185..186,250..251,260,262,
                     266)
                     /site_type="other"
                     /note="tetramer (dimer of dimers) interface [polypeptide
                     binding]"
                     /db_xref="CDD:238692"
     Site            order(100,102..103,170..171,173,183..186,192,210)
                     /site_type="active"
                     /db_xref="CDD:238692"
     Site            order(159,163,191,198,229..230,232..234,237,286..287,292)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238692"
     CDS             1..320
                     /gene="RPIA"
                     /coded_by="XM_061155311.1:28..990"
                     /db_xref="GeneID:133064827"
ORIGIN      
        1 mqrpgpfstl ygrvlaplpg raggaasggg gnswgvpgsh vqlpgrsqfg agststgare
       61 vnsvcpgpsa mskaeeakkr agraavenhv rnnqvlgigs gstivhavqr iaervkqenl
      121 nlvciptsfq fthpspslqd shilarqlil qhgltlsdld rhpeidlaid gadevdadln
      181 likggggclt qekivagnas rfiviadfrk dsknlgdqwh kgipievipm ayvpvsrtvt
      241 qkfggaielr mavnkagpvv tdngnfildw kfdrvhkwsd vntaikmipg vvdtglfinm
      301 aervyfgmqd gsvnmrekpf
//
LOCUS       XP_061011295             306 aa            linear   MAM 02-DEC-2023
DEFINITION  ribose-5-phosphate isomerase isoform X2 [Dama dama].
ACCESSION   XP_061011295
VERSION     XP_061011295.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155312.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..306
                     /product="ribose-5-phosphate isomerase isoform X2"
                     /calculated_mol_wt=32601
     Region          77..294
                     /region_name="RPI_A"
                     /note="Ribose 5-phosphate isomerase type A (RPI_A)
                     subfamily; RPI catalyzes the reversible conversion of
                     ribose-5-phosphate to ribulose 5-phosphate, the first step
                     of the non-oxidative branch of the pentose phosphate
                     pathway. This reaction leads to the...; cd01398"
                     /db_xref="CDD:238692"
     Site            order(100,129,132..133,142,144,171..172,236..237,246,248,
                     252)
                     /site_type="other"
                     /note="tetramer (dimer of dimers) interface [polypeptide
                     binding]"
                     /db_xref="CDD:238692"
     Site            order(100,102..103,156..157,159,169..172,178,196)
                     /site_type="active"
                     /db_xref="CDD:238692"
     Site            order(145,149,177,184,215..216,218..220,223,272..273,278)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238692"
     CDS             1..306
                     /gene="RPIA"
                     /coded_by="XM_061155312.1:28..948"
                     /db_xref="GeneID:133064827"
ORIGIN      
        1 mqrpgpfstl ygrvlaplpg raggaasggg gnswgvpgsh vqlpgrsqfg agststgare
       61 vnsvcpgpsa mskaeeakkr agraavenhv rnnqvlgigs gstivhavqr iaervkqenl
      121 nlvciptsfq arqlilqhgl tlsdldrhpe idlaidgade vdadlnlikg gggcltqeki
      181 vagnasrfiv iadfrkdskn lgdqwhkgip ievipmayvp vsrtvtqkfg gaielrmavn
      241 kagpvvtdng nfildwkfdr vhkwsdvnta ikmipgvvdt glfinmaerv yfgmqdgsvn
      301 mrekpf
//
LOCUS       XP_061011296            1021 aa            linear   MAM 02-DEC-2023
DEFINITION  PH and SEC7 domain-containing protein 4 isoform X1 [Dama dama].
ACCESSION   XP_061011296
VERSION     XP_061011296.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155313.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1021
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1021
                     /product="PH and SEC7 domain-containing protein 4 isoform
                     X1"
                     /calculated_mol_wt=111775
     Region          <148..539
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          536..704
                     /region_name="Sec7"
                     /note="Sec7 domain; Domain named after the S. cerevisiae
                     SEC7 gene product. The Sec7 domain is the central domain
                     of the guanine-nucleotide-exchange factors (GEFs) of the
                     ADP-ribosylation factor family of small GTPases (ARFs) .
                     It carries the exchange factor...; cd00171"
                     /db_xref="CDD:238100"
     Site            order(612..619,648..661)
                     /site_type="active"
                     /note="active site/putative ARF binding site [active]"
                     /db_xref="CDD:238100"
     Region          738..865
                     /region_name="PH_EFA6"
                     /note="Exchange Factor for ARF6 Pleckstrin homology (PH)
                     domain; cd13295"
                     /db_xref="CDD:270107"
     CDS             1..1021
                     /gene="PSD4"
                     /coded_by="XM_061155313.1:359..3424"
                     /db_xref="GeneID:133064835"
ORIGIN      
        1 mmgddglcgh prpveildic lgdnlqphse ahlgetyghp eplephgeqt wasvppdavr
       61 pdvcpqgssp epmhlgsgss qeqagqktts pgssrdsqpl gspgqsqsts tqvvfwagil
      121 qaqmcvldle eelekteglr aelrccipaa padlptfpss pvgprnsgll psppmdadea
      181 sgedssgpeg etqnpawpre galdlspews aeeesiffdn plflespcsd tsasethfsw
      241 gfsdsyvdvr tgpqspqtle ppppggrvpw elggepdlge staessghtt ppfpvptyrp
      301 hsfswvvvdt pegapsapss qeetksslrd slepaspaas cvdqtvswet ehvesngrpa
      361 thpvqpwagp stqgwptkvi pswppgplss qdrgdkdtec vqesapctva pghpwgspas
      421 spepsspesg vrgsnsllsp vsregslrlq grppdsvlpe wtldapspsf letdgvqpgs
      481 lekeeageap nrgkevklsp artaeagarq pdtcltsakt lpgspvpqvq ppeegqrppa
      541 gdklangvrt dkvawnlasr lyhlegfrks evaaylrknn dfsravaeey lsffqfggqs
      601 ldralrgflq alvlsgetqe rerilyqfsk rfhhcnpglf ssvdcvhtlt caimllntdl
      661 hgqnigksms cqefitnlng lrdggnfpke llkalywsir seklewavde edaarpekar
      721 psppagkmsn pflqlaqdpt vptykqgfla rkmhqdadgk ktpwgkrgwk mlhtllrgmv
      781 lyflkgedhg ldgeslvgqm vdepvgvhhs latpathytk kphvfqlrta dwrlylfqap
      841 taqemtswia rinlaaaths appfpaavgs qrkfvrpilp vgptqgslee qhrshencld
      901 aasddlldlq rnlperrgrs reledyrlrk eyleyektry etylqllvar lhcpsedldl
      961 weeqlgreag dlqepkpslk kshsspslhq deapttakvk rniserrtyr kiipkrnrnl
     1021 l
//
LOCUS       XP_061011297            1021 aa            linear   MAM 02-DEC-2023
DEFINITION  PH and SEC7 domain-containing protein 4 isoform X1 [Dama dama].
ACCESSION   XP_061011297
VERSION     XP_061011297.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155314.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1021
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1021
                     /product="PH and SEC7 domain-containing protein 4 isoform
                     X1"
                     /calculated_mol_wt=111775
     Region          <148..539
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          536..704
                     /region_name="Sec7"
                     /note="Sec7 domain; Domain named after the S. cerevisiae
                     SEC7 gene product. The Sec7 domain is the central domain
                     of the guanine-nucleotide-exchange factors (GEFs) of the
                     ADP-ribosylation factor family of small GTPases (ARFs) .
                     It carries the exchange factor...; cd00171"
                     /db_xref="CDD:238100"
     Site            order(612..619,648..661)
                     /site_type="active"
                     /note="active site/putative ARF binding site [active]"
                     /db_xref="CDD:238100"
     Region          738..865
                     /region_name="PH_EFA6"
                     /note="Exchange Factor for ARF6 Pleckstrin homology (PH)
                     domain; cd13295"
                     /db_xref="CDD:270107"
     CDS             1..1021
                     /gene="PSD4"
                     /coded_by="XM_061155314.1:369..3434"
                     /db_xref="GeneID:133064835"
ORIGIN      
        1 mmgddglcgh prpveildic lgdnlqphse ahlgetyghp eplephgeqt wasvppdavr
       61 pdvcpqgssp epmhlgsgss qeqagqktts pgssrdsqpl gspgqsqsts tqvvfwagil
      121 qaqmcvldle eelekteglr aelrccipaa padlptfpss pvgprnsgll psppmdadea
      181 sgedssgpeg etqnpawpre galdlspews aeeesiffdn plflespcsd tsasethfsw
      241 gfsdsyvdvr tgpqspqtle ppppggrvpw elggepdlge staessghtt ppfpvptyrp
      301 hsfswvvvdt pegapsapss qeetksslrd slepaspaas cvdqtvswet ehvesngrpa
      361 thpvqpwagp stqgwptkvi pswppgplss qdrgdkdtec vqesapctva pghpwgspas
      421 spepsspesg vrgsnsllsp vsregslrlq grppdsvlpe wtldapspsf letdgvqpgs
      481 lekeeageap nrgkevklsp artaeagarq pdtcltsakt lpgspvpqvq ppeegqrppa
      541 gdklangvrt dkvawnlasr lyhlegfrks evaaylrknn dfsravaeey lsffqfggqs
      601 ldralrgflq alvlsgetqe rerilyqfsk rfhhcnpglf ssvdcvhtlt caimllntdl
      661 hgqnigksms cqefitnlng lrdggnfpke llkalywsir seklewavde edaarpekar
      721 psppagkmsn pflqlaqdpt vptykqgfla rkmhqdadgk ktpwgkrgwk mlhtllrgmv
      781 lyflkgedhg ldgeslvgqm vdepvgvhhs latpathytk kphvfqlrta dwrlylfqap
      841 taqemtswia rinlaaaths appfpaavgs qrkfvrpilp vgptqgslee qhrshencld
      901 aasddlldlq rnlperrgrs reledyrlrk eyleyektry etylqllvar lhcpsedldl
      961 weeqlgreag dlqepkpslk kshsspslhq deapttakvk rniserrtyr kiipkrnrnl
     1021 l
//
LOCUS       XP_061011298            1021 aa            linear   MAM 02-DEC-2023
DEFINITION  PH and SEC7 domain-containing protein 4 isoform X1 [Dama dama].
ACCESSION   XP_061011298
VERSION     XP_061011298.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155315.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1021
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1021
                     /product="PH and SEC7 domain-containing protein 4 isoform
                     X1"
                     /calculated_mol_wt=111775
     Region          <148..539
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          536..704
                     /region_name="Sec7"
                     /note="Sec7 domain; Domain named after the S. cerevisiae
                     SEC7 gene product. The Sec7 domain is the central domain
                     of the guanine-nucleotide-exchange factors (GEFs) of the
                     ADP-ribosylation factor family of small GTPases (ARFs) .
                     It carries the exchange factor...; cd00171"
                     /db_xref="CDD:238100"
     Site            order(612..619,648..661)
                     /site_type="active"
                     /note="active site/putative ARF binding site [active]"
                     /db_xref="CDD:238100"
     Region          738..865
                     /region_name="PH_EFA6"
                     /note="Exchange Factor for ARF6 Pleckstrin homology (PH)
                     domain; cd13295"
                     /db_xref="CDD:270107"
     CDS             1..1021
                     /gene="PSD4"
                     /coded_by="XM_061155315.1:133..3198"
                     /db_xref="GeneID:133064835"
ORIGIN      
        1 mmgddglcgh prpveildic lgdnlqphse ahlgetyghp eplephgeqt wasvppdavr
       61 pdvcpqgssp epmhlgsgss qeqagqktts pgssrdsqpl gspgqsqsts tqvvfwagil
      121 qaqmcvldle eelekteglr aelrccipaa padlptfpss pvgprnsgll psppmdadea
      181 sgedssgpeg etqnpawpre galdlspews aeeesiffdn plflespcsd tsasethfsw
      241 gfsdsyvdvr tgpqspqtle ppppggrvpw elggepdlge staessghtt ppfpvptyrp
      301 hsfswvvvdt pegapsapss qeetksslrd slepaspaas cvdqtvswet ehvesngrpa
      361 thpvqpwagp stqgwptkvi pswppgplss qdrgdkdtec vqesapctva pghpwgspas
      421 spepsspesg vrgsnsllsp vsregslrlq grppdsvlpe wtldapspsf letdgvqpgs
      481 lekeeageap nrgkevklsp artaeagarq pdtcltsakt lpgspvpqvq ppeegqrppa
      541 gdklangvrt dkvawnlasr lyhlegfrks evaaylrknn dfsravaeey lsffqfggqs
      601 ldralrgflq alvlsgetqe rerilyqfsk rfhhcnpglf ssvdcvhtlt caimllntdl
      661 hgqnigksms cqefitnlng lrdggnfpke llkalywsir seklewavde edaarpekar
      721 psppagkmsn pflqlaqdpt vptykqgfla rkmhqdadgk ktpwgkrgwk mlhtllrgmv
      781 lyflkgedhg ldgeslvgqm vdepvgvhhs latpathytk kphvfqlrta dwrlylfqap
      841 taqemtswia rinlaaaths appfpaavgs qrkfvrpilp vgptqgslee qhrshencld
      901 aasddlldlq rnlperrgrs reledyrlrk eyleyektry etylqllvar lhcpsedldl
      961 weeqlgreag dlqepkpslk kshsspslhq deapttakvk rniserrtyr kiipkrnrnl
     1021 l
//
LOCUS       XP_061011299             723 aa            linear   MAM 02-DEC-2023
DEFINITION  PH and SEC7 domain-containing protein 4 isoform X2 [Dama dama].
ACCESSION   XP_061011299
VERSION     XP_061011299.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155316.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..723
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..723
                     /product="PH and SEC7 domain-containing protein 4 isoform
                     X2"
                     /calculated_mol_wt=80181
     Region          238..406
                     /region_name="Sec7"
                     /note="Sec7 domain; Domain named after the S. cerevisiae
                     SEC7 gene product. The Sec7 domain is the central domain
                     of the guanine-nucleotide-exchange factors (GEFs) of the
                     ADP-ribosylation factor family of small GTPases (ARFs) .
                     It carries the exchange factor...; cd00171"
                     /db_xref="CDD:238100"
     Site            order(314..321,350..363)
                     /site_type="active"
                     /note="active site/putative ARF binding site [active]"
                     /db_xref="CDD:238100"
     Region          440..567
                     /region_name="PH_EFA6"
                     /note="Exchange Factor for ARF6 Pleckstrin homology (PH)
                     domain; cd13295"
                     /db_xref="CDD:270107"
     CDS             1..723
                     /gene="PSD4"
                     /coded_by="XM_061155316.1:138..2309"
                     /db_xref="GeneID:133064835"
ORIGIN      
        1 mphsfswvvv dtpegapsap ssqeetkssl rdslepaspa ascvdqtvsw etehvesngr
       61 pathpvqpwa gpstqgwptk vipswppgpl ssqdrgdkdt ecvqesapct vapghpwgsp
      121 asspepsspe sgvrgsnsll spvsregslr lqgrppdsvl pewtldapsp sfletdgvqp
      181 gslekeeage apnrgkevkl spartaeaga rqpdtcltsa ktlpgspvpq vqppeegqrp
      241 pagdklangv rtdkvawnla srlyhlegfr ksevaaylrk nndfsravae eylsffqfgg
      301 qsldralrgf lqalvlsget qererilyqf skrfhhcnpg lfssvdcvht ltcaimllnt
      361 dlhgqnigks mscqefitnl nglrdggnfp kellkalyws irseklewav deedaarpek
      421 arpsppagkm snpflqlaqd ptvptykqgf larkmhqdad gkktpwgkrg wkmlhtllrg
      481 mvlyflkged hgldgeslvg qmvdepvgvh hslatpathy tkkphvfqlr tadwrlylfq
      541 aptaqemtsw iarinlaaat hsappfpaav gsqrkfvrpi lpvgptqgsl eeqhrshenc
      601 ldaasddlld lqrnlperrg rsreledyrl rkeyleyekt ryetylqllv arlhcpsedl
      661 dlweeqlgre agdlqepkps lkkshsspsl hqdeapttak vkrniserrt yrkiipkrnr
      721 nll
//
LOCUS       XP_061011300             174 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-1 receptor antagonist protein isoform X1 [Dama dama].
ACCESSION   XP_061011300
VERSION     XP_061011300.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155317.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..174
                     /product="interleukin-1 receptor antagonist protein
                     isoform X1"
                     /calculated_mol_wt=19687
     Region          31..172
                     /region_name="beta-trefoil_IL1"
                     /note="beta-trefoil domain found in the interleukin-1
                     (IL-1) family of cytokines; cl00094"
                     /db_xref="CDD:469612"
     CDS             1..174
                     /gene="IL1RN"
                     /coded_by="XM_061155317.1:70..594"
                     /db_xref="GeneID:133064836"
ORIGIN      
        1 mdiyiygyli clllflfhse tachplgkrp cemqafriwd vnqkifylrn nqlvagylqg
       61 pntkleekid vvpiephtmf lgihggklcl acvksgdeik lkleavnitd lsqnreqdkr
      121 fafirsdngp ttsfesaacp gwflctslea dqpvgftnkp teaikvtkfy fqqd
//
LOCUS       XP_061011301             142 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-1 receptor antagonist protein isoform X2 [Dama dama].
ACCESSION   XP_061011301
VERSION     XP_061011301.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155318.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..142
                     /product="interleukin-1 receptor antagonist protein
                     isoform X2"
                     /calculated_mol_wt=15944
     Region          1..140
                     /region_name="beta-trefoil_IL1"
                     /note="beta-trefoil domain found in the interleukin-1
                     (IL-1) family of cytokines; cl00094"
                     /db_xref="CDD:469612"
     CDS             1..142
                     /gene="IL1RN"
                     /coded_by="XM_061155318.1:132..560"
                     /db_xref="GeneID:133064836"
ORIGIN      
        1 mqafriwdvn qkifylrnnq lvagylqgpn tkleekidvv piephtmflg ihggklclac
       61 vksgdeiklk leavnitdls qnreqdkrfa firsdngptt sfesaacpgw flctsleadq
      121 pvgftnkpte aikvtkfyfq qd
//
LOCUS       XP_061011302             266 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-1 beta [Dama dama].
ACCESSION   XP_061011302
VERSION     XP_061011302.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155319.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..266
                     /product="interleukin-1 beta"
                     /calculated_mol_wt=30528
     Region          1..101
                     /region_name="IL1_propep"
                     /note="Interleukin-1 propeptide; pfam02394"
                     /db_xref="CDD:426754"
     Region          116..262
                     /region_name="IL1"
                     /note="Interleukin-1 homologues; smart00125"
                     /db_xref="CDD:128430"
     Site            order(117,124,126..128,134,137,140,142..146,149,151,159,
                     161,164,165,169,206..207,216..218,219..222,224,239,
                     241..243,250..251,254,257..258)
                     /site_type="other"
                     /note="receptor binding site [polypeptide binding]"
                     /db_xref="CDD:466778"
     Site            order(132..135,138,140,142,144,150..152,179,199..201,242)
                     /site_type="other"
                     /note="antibody binding site [polypeptide binding]"
                     /db_xref="CDD:466778"
     CDS             1..266
                     /gene="IL1B"
                     /coded_by="XM_061155319.1:130..930"
                     /db_xref="GeneID:133064837"
ORIGIN      
        1 matvpepine mmayysdene llfeadgpkq mksciqhldl gsmevgniql qishqlynks
       61 frqvvsviva meklrnsaya hvfhdddlrn vlsfifeeep vifetssdef lcdaavqsvn
      121 cklqdreqks lvlaspcvlk alhllsqems revvfcmsfv qaeerdnkip valgirdknl
      181 ylscvkkgdt ptlqleevdp kvypkrnmek rfvfykteik dtvefesvly pnwyistsqt
      241 eekpvflghf rggqditdfr metlsp
//
LOCUS       XP_061011303             268 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-1 alpha [Dama dama].
ACCESSION   XP_061011303
VERSION     XP_061011303.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155320.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..268
                     /product="interleukin-1 alpha"
                     /calculated_mol_wt=30632
     Region          1..109
                     /region_name="IL1_propep"
                     /note="Interleukin-1 propeptide; pfam02394"
                     /db_xref="CDD:426754"
     Region          123..266
                     /region_name="beta-trefoil_IL1A"
                     /note="beta-trefoil domain found in interleukin-1 alpha
                     (IL-1 alpha) and similar proteins; cd23295"
                     /db_xref="CDD:466777"
     Site            order(127..128,130,171,173..174,175,179..180,224,226)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:466777"
     CDS             1..268
                     /gene="IL1A"
                     /coded_by="XM_061155320.1:102..908"
                     /db_xref="GeneID:133064838"
ORIGIN      
        1 makvpdlfed lkncysened ysseidhlsl nqksfydasy eplrgdhmnk fmsldtskts
       61 ktsklsfken vvmvaangki lkkrrlslnq fitdddleai annteeeiir prsahysfqs
      121 nvkynfmrvi heecilndal nqsiirdmsg pyltaatlnn ldeavkfdiv ayvseedsql
      181 pvtlrisktq lfvsaqnede pvllkempet pkiikdetnl lffwekhgsm dyfksvahpk
      241 lfiatkqekl vhmasgppsi tdfqilek
//
LOCUS       XP_061011304             744 aa            linear   MAM 02-DEC-2023
DEFINITION  cytoskeleton-associated protein 2-like isoform X1 [Dama dama].
ACCESSION   XP_061011304
VERSION     XP_061011304.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155321.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..744
                     /product="cytoskeleton-associated protein 2-like isoform
                     X1"
                     /calculated_mol_wt=82393
     Region          433..733
                     /region_name="CKAP2_C"
                     /note="Cytoskeleton-associated protein 2 C-terminus;
                     pfam15297"
                     /db_xref="CDD:464623"
     CDS             1..744
                     /gene="CKAP2L"
                     /coded_by="XM_061155321.1:66..2300"
                     /db_xref="GeneID:133064840"
ORIGIN      
        1 mvrpglsaaa eerqrklqey laakgklkcq ntkpylkarn ncpnplpsks tigpkkdvtn
       61 hvalpvkatr sisiklqsgp anitrsqrpk leppklgkrl tsesvssnpn gkppgnsqql
      121 hgfgsstdge qpretmgsln ipelkttkqq vtdqrtakrt dpvdnmhven eslggclkem
      181 nkenlpqdlp dserkpnpes wtinkpktnq tksalaptge vlgkssgnga altqrvrkpf
      241 veetqtrvpp gksqqlsrga dlirpggkpp kilpshfvqt lnrsqatkkt vvkdikavkv
      301 nrgkyerpne tklqpytvte qkvkhskpst hpsalqggcn hrhpnikqdh kptqaccrpr
      361 tsyalqkska isqrpnltvg sfnsvipstp sirangatgn kcnnscqqra qtldskfkga
      421 ppqncflnkt apriqaggpt vsrrgvpdgt qtnprqkiaa edrrkqleew rkskgkiykr
      481 ppmelktkrk iieemnisfw ksmekeeeek kaqlelsnki nstlteclql iergvlsnev
      541 failssipea ekfakfwick akllagkgtf dviglyeeai rngatpiqel revvlnilqd
      601 rnrttegiis nslvaetnit sveelakkte sgasclspke ieqmsvtpqi tkseqdghpg
      661 iklqiapipr ingmpevqdm klitpvrrsa rieravsryp emlqehdlvv aslnelleve
      721 etecfifrkn ealpvtlgfq vpes
//
LOCUS       XP_061011305             737 aa            linear   MAM 02-DEC-2023
DEFINITION  cytoskeleton-associated protein 2-like isoform X2 [Dama dama].
ACCESSION   XP_061011305
VERSION     XP_061011305.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155322.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..737
                     /product="cytoskeleton-associated protein 2-like isoform
                     X2"
                     /calculated_mol_wt=81708
     Region          433..726
                     /region_name="CKAP2_C"
                     /note="Cytoskeleton-associated protein 2 C-terminus;
                     pfam15297"
                     /db_xref="CDD:464623"
     CDS             1..737
                     /gene="CKAP2L"
                     /coded_by="XM_061155322.1:66..2279"
                     /db_xref="GeneID:133064840"
ORIGIN      
        1 mvrpglsaaa eerqrklqey laakgklkcq ntkpylkarn ncpnplpsks tigpkkdvtn
       61 hvalpvkatr sisiklqsgp anitrsqrpk leppklgkrl tsesvssnpn gkppgnsqql
      121 hgfgsstdge qpretmgsln ipelkttkqq vtdqrtakrt dpvdnmhven eslggclkem
      181 nkenlpqdlp dserkpnpes wtinkpktnq tksalaptge vlgkssgnga altqrvrkpf
      241 veetqtrvpp gksqqlsrga dlirpggkpp kilpshfvqt lnrsqatkkt vvkdikavkv
      301 nrgkyerpne tklqpytvte qkvkhskpst hpsalqggcn hrhpnikqdh kptqaccrpr
      361 tsyalqkska isqrpnltvg sfnsvipstp sirangatgn kcnnscqqra qtldskfkga
      421 ppqncflnkt apriqaggpt vsrrgvpdgt qtnprqkiaa edrrkqleew rkskgkiykr
      481 ppmelktkrk iieemnisfw ksmekeeeek kaqlelsnki nstlteclql iergvlsnev
      541 failssipea ekfakfwick akllagkgtf dviglyeeai rngatpiqel revvlnilqd
      601 rnrttevaet nitsveelak ktesgascls pkeieqmsvt pqitkseqdg hpgiklqiap
      661 ipringmpev qdmklitpvr rsarieravs rypemlqehd lvvaslnell eveetecfif
      721 rknealpvtl gfqvpes
//
LOCUS       XP_061011306             101 aa            linear   MAM 02-DEC-2023
DEFINITION  non-histone chromosomal protein HMG-14-like [Dama dama].
ACCESSION   XP_061011306
VERSION     XP_061011306.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155323.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..101
                     /product="non-histone chromosomal protein HMG-14-like"
                     /calculated_mol_wt=10673
     Region          2..96
                     /region_name="HMG14_17"
                     /note="HMG14 and HMG17; pfam01101"
                     /db_xref="CDD:460064"
     CDS             1..101
                     /gene="LOC133064841"
                     /coded_by="XM_061155323.1:194..499"
                     /db_xref="GeneID:133064841"
ORIGIN      
        1 mpkrkvssae gaakeeptrr sarlsakpap akvetkpkka agkdkssdkk vqtkgkrgak
       61 gkqaevanqe tkedlpaeng etkneespas deaeekeaks d
//
LOCUS       XP_061011307            1135 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA-directed RNA polymerase I subunit RPA2 [Dama dama].
ACCESSION   XP_061011307
VERSION     XP_061011307.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155324.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1135
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1135
                     /product="DNA-directed RNA polymerase I subunit RPA2"
                     /calculated_mol_wt=128105
     Region          38..1133
                     /region_name="RNA_pol_B_RPB2"
                     /note="RNA polymerase beta subunit. RNA polymerases
                     catalyse the DNA dependent polymerization of RNA.
                     Prokaryotes contain a single RNA polymerase compared to
                     three in eukaryotes (not including mitochondrial. and
                     chloroplast polymerases). Each RNA polymerase...; cd00653"
                     /db_xref="CDD:238353"
     Site            order(106,770,808,810,814..816,818)
                     /site_type="other"
                     /note="RPB12 interaction site [polypeptide binding]"
                     /db_xref="CDD:238353"
     Region          186..375
                     /region_name="RNA_pol_Rpb2_2"
                     /note="RNA polymerase Rpb2, domain 2; pfam04561"
                     /db_xref="CDD:398318"
     Site            order(485,487..489,491,494,499,660,678..680,682,745..748,
                     751,753..755,890,892,894,916,918,921,924,929,933,950,981,
                     989..991,993,1006,1009..1011,1013..1014,1035..1037,1041,
                     1043..1044,1046,1048..1053,1055..1060,1064,1113,1117,1119,
                     1121..1122,1124,1126..1129,1131,1133)
                     /site_type="other"
                     /note="RPB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:238353"
     Region          563..621
                     /region_name="RNA_pol_Rpa2_4"
                     /note="RNA polymerase I, Rpa2 specific domain; pfam06883"
                     /db_xref="CDD:462028"
     Site            order(718..719,740,742,763,766,899,912,939..940,942,977,
                     994)
                     /site_type="other"
                     /note="RPB10 interaction site [polypeptide binding]"
                     /db_xref="CDD:238353"
     Site            order(751,765,898,983)
                     /site_type="other"
                     /note="RPB11 interaction site [polypeptide binding]"
                     /db_xref="CDD:238353"
     Site            order(765..766,770,872,874,899..901,904,906..907,982..989,
                     991)
                     /site_type="other"
                     /note="RPB3 interaction site [polypeptide binding]"
                     /db_xref="CDD:238353"
     CDS             1..1135
                     /gene="POLR1B"
                     /coded_by="XM_061155324.1:88..3495"
                     /db_xref="GeneID:133064842"
ORIGIN      
        1 mdpggrwrnl psgpslkhlt dpsygipreq qkpalqeltr ahvesfnyav reglshavqa
       61 vppfefafkd erisltivda visppavpkg sickelnvyp aecrgrrsty rgkltadisw
      121 svngiskgvi kqflgyvpim vksklcnlyn lppkaliehh eeaeemggyf iingiekvir
      181 mlimprrnfp iamvrpkwks rgpgytqygv smhcvreehs avnmnlhyle ngtvmlnfiy
      241 rkelfflplg falkalvsfs dyqifqelik gkeddsffrn svsqmlrivm eegcstqkqv
      301 lnylgerfrv klslpdwypn eqaaeflfnq cicihlksnt ekfyvlclmt rklfalakge
      361 cmeenpdslv nqevltpgql flmflkekle awlvsikiai dkksqktnvs lnsenlmkif
      421 slgldltkpf eyllatgnlr sktglgflqd sglcvvadkl nfirylshfr cvhrgsdfak
      481 mrtttvrrll peswgflcpv htpdgepcgl mnhltaicev vtqsvytasi pallcnlgvt
      541 pvdgtphrpy secypvlldg vmigwadkei apgiadslrh fkvlrekrip pwmevalipm
      601 tgkpslypgl ylfttpcrlv rpvqnlelgk eeligtmeql fmnvaifede vlagvtthqe
      661 lfphsllsvi anfipfsdhn qsprnmyqcq mgkqtmgfpl ltfqdrsdnk lyrlqtpqsp
      721 lvrpymydyy dmdnypigtn aivavisytg ydmedamivn kaswergfah gsvyksefid
      781 lsekikqgdd slvfgvkpgd prvlqklddd glpfigaqlk ygdpyysyln lntgegfvty
      841 ykskencvvd nikvcsndtg ngkfkcvcit mrvprnptig dkfasrhgqk gilsrlwpve
      901 dmpftesgmv pdilfnphgf psrmtigmli esmagksaal hglchdatpf tfseensale
      961 yfgemlkaag ynyygterly sgisglelea difigvvyyq rlrhmvsdkf qvrttgardk
     1021 vtnqplggrn vqggirfgem erdallahgt sfllhdrlfn csdrsvahvc vkcgsllspl
     1081 lekpppswsa lrnrkyncal cnrsdtidtv svpyvfryfv aelaamnikv kldiv
//
LOCUS       XP_061011308             687 aa            linear   MAM 02-DEC-2023
DEFINITION  sodium-dependent phosphate transporter 1 [Dama dama].
ACCESSION   XP_061011308
VERSION     XP_061011308.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155325.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..687
                     /product="sodium-dependent phosphate transporter 1"
                     /calculated_mol_wt=74237
     Region          44..>203
                     /region_name="PHO4"
                     /note="Phosphate transporter family; pfam01384"
                     /db_xref="CDD:460184"
     Region          <510..669
                     /region_name="PHO4"
                     /note="Phosphate transporter family; pfam01384"
                     /db_xref="CDD:460184"
     CDS             1..687
                     /gene="SLC20A1"
                     /coded_by="XM_061155325.1:492..2555"
                     /db_xref="GeneID:133064843"
ORIGIN      
        1 mattvaplit taiaataass psvnylwmli lgfiiafvla fsvgandvan sfgtavgsgv
       61 vtlkqacila sifetvgsvl lgakvsetir kglidvemyn stqvllmags vsamfgsavw
      121 qlvasflklp isgthcivga tigfslvakg qegvkwseli kivlswfvsp llsgimsgil
      181 fflvrafilr kadpvpnglr alpvfyacti ginlfsimyt gapllgfdkl plwgtilisv
      241 gcavfcaliv wffvcprmkr kiereikssp sesplmekkn slkedheetk lslsdietrn
      301 pvsevgsatv plravveert vsfklgdlee apererlpsv dlkeetsidg smngavqlpn
      361 gnlvqfsqav snqisssghy qyhtvhkdsg lykellhklh lakvgdcmgd sgdkplrrnn
      421 sytsytmaic gmpldsfrak egeqkgeeme kltwpnadsk krirmdsyts ycnavsdihs
      481 asemdmsvka emglsdrkgs tssleewcdq dkpevsllfq flqiltacfg sfahggndvs
      541 naigplvaly lvydtgdvss kvatpiwlll yggvgicigl wvwgrrviqt mgkdltpitp
      601 ssgfsielas altvviasni glpistthck vgsvvsvgwl rskkavdwrl frnifmawfv
      661 tvpisgvisa aimavfkyii lpalgcv
//
LOCUS       XP_061011309             134 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil-helix-coiled-coil-helix domain-containing protein 5
            isoform X1 [Dama dama].
ACCESSION   XP_061011309
VERSION     XP_061011309.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155326.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..134
                     /product="coiled-coil-helix-coiled-coil-helix
                     domain-containing protein 5 isoform X1"
                     /calculated_mol_wt=14762
     Region          7..49
                     /region_name="CX9C"
                     /note="CHCH-CHCH-like Cx9C, IMS import disulfide
                     relay-system; pfam16860"
                     /db_xref="CDD:465284"
     Region          58..92
                     /region_name="CHCH"
                     /note="CHCH domain; pfam06747"
                     /db_xref="CDD:429096"
     CDS             1..134
                     /gene="CHCHD5"
                     /coded_by="XM_061155326.1:292..696"
                     /db_xref="GeneID:133064844"
ORIGIN      
        1 mqaaleitar ycsreleqyg qcvaakpesw qrdchhlkms iaqctsahpi irqirqacle
       61 pfkafedclr qneaavgnca ehvrrflqca eqvqpthrps tlevlavvva slvallkstg
      121 srcsgfsscs awaq
//
LOCUS       XP_061011310             119 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil-helix-coiled-coil-helix domain-containing protein 5
            isoform X2 [Dama dama].
ACCESSION   XP_061011310
VERSION     XP_061011310.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155327.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..119
                     /product="coiled-coil-helix-coiled-coil-helix
                     domain-containing protein 5 isoform X2"
                     /calculated_mol_wt=13566
     Region          7..49
                     /region_name="CX9C"
                     /note="CHCH-CHCH-like Cx9C, IMS import disulfide
                     relay-system; pfam16860"
                     /db_xref="CDD:465284"
     Region          58..92
                     /region_name="CHCH"
                     /note="CHCH domain; pfam06747"
                     /db_xref="CDD:429096"
     CDS             1..119
                     /gene="CHCHD5"
                     /coded_by="XM_061155327.1:292..651"
                     /db_xref="GeneID:133064844"
ORIGIN      
        1 mqaaleitar ycsreleqyg qcvaakpesw qrdchhlkms iaqctsahpi irqirqacle
       61 pfkafedclr qneaavgnca ehvrrflqca eqvqpthrps tleknlrknc khhgplllm
//
LOCUS       XP_061011312             110 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil-helix-coiled-coil-helix domain-containing protein 5
            isoform X3 [Dama dama].
ACCESSION   XP_061011312
VERSION     XP_061011312.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155329.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..110
                     /product="coiled-coil-helix-coiled-coil-helix
                     domain-containing protein 5 isoform X3"
                     /calculated_mol_wt=12355
     Region          7..49
                     /region_name="CX9C"
                     /note="CHCH-CHCH-like Cx9C, IMS import disulfide
                     relay-system; pfam16860"
                     /db_xref="CDD:465284"
     Region          58..92
                     /region_name="CHCH"
                     /note="CHCH domain; pfam06747"
                     /db_xref="CDD:429096"
     CDS             1..110
                     /gene="CHCHD5"
                     /coded_by="XM_061155329.1:292..624"
                     /db_xref="GeneID:133064844"
ORIGIN      
        1 mqaaleitar ycsreleqyg qcvaakpesw qrdchhlkms iaqctsahpi irqirqacle
       61 pfkafedclr qneaavgnca ehvrrflqca eqvqpthrps tleahplpas
//
LOCUS       XP_061011313             108 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil-helix-coiled-coil-helix domain-containing protein 5
            isoform X4 [Dama dama].
ACCESSION   XP_061011313
VERSION     XP_061011313.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155330.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..108
                     /product="coiled-coil-helix-coiled-coil-helix
                     domain-containing protein 5 isoform X4"
                     /calculated_mol_wt=12239
     Region          7..48
                     /region_name="CX9C"
                     /note="CHCH-CHCH-like Cx9C, IMS import disulfide
                     relay-system; pfam16860"
                     /db_xref="CDD:465284"
     CDS             1..108
                     /gene="CHCHD5"
                     /coded_by="XM_061155330.1:292..618"
                     /db_xref="GeneID:133064844"
ORIGIN      
        1 mqaaleitar ycsreleqyg qcvaakpesw qrdchhlkms iaqctsaqmk plwatvrstc
       61 adscsvrsrc srhtdpppwr hthflppedp sdyrktghew latgcprp
//
LOCUS       XP_061011314             377 aa            linear   MAM 02-DEC-2023
DEFINITION  tubulin--tyrosine ligase [Dama dama].
ACCESSION   XP_061011314
VERSION     XP_061011314.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155331.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..377
                     /product="tubulin--tyrosine ligase"
                     /calculated_mol_wt=43084
     Region          81..366
                     /region_name="TTL"
                     /note="Tubulin-tyrosine ligase family; pfam03133"
                     /db_xref="CDD:397308"
     CDS             1..377
                     /gene="TTL"
                     /coded_by="XM_061155331.1:108..1241"
                     /db_xref="GeneID:133064847"
ORIGIN      
        1 mytfvvrden ssvyaevsrl llatghwkrl rrdnprfnlm lgernrlpfg rlghepglmq
       61 lvnyyrgadk lcrkaslvkl iktspelaes ctwfpesyvi yptnlktpva paqngihppf
      121 hssrtderef flasynrkke egegnvwiak ssagakgegi lissdatell dfidnqgqvh
      181 viqkylerpl llepghrkfd irswvlvdhq fniylyregv lrtasepyhm dnfqdktchl
      241 tnhciqkeys knygkyeegn emffeafnqy ltsalnitle ssillqikhi irscltsvep
      301 aistkhlpyq sfqlfgfdfm vdealkvwli evngapacaq klyaelcqgi vdiaiasvfp
      361 ppdveqqppq patfikl
//
LOCUS       XP_061011315             376 aa            linear   MAM 02-DEC-2023
DEFINITION  cytoplasmic protein NCK2 [Dama dama].
ACCESSION   XP_061011315
VERSION     XP_061011315.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155332.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..376
                     /product="cytoplasmic protein NCK2"
                     /calculated_mol_wt=41811
     Region          2..59
                     /region_name="SH3_Nck2_1"
                     /note="First Src Homology 3 domain of Nck2 adaptor
                     protein; cd11899"
                     /db_xref="CDD:212832"
     Site            order(13,16..17,19..20,36..38,50,52..55)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212832"
     Region          114..168
                     /region_name="SH3_Nck2_2"
                     /note="Second Src Homology 3 domain of Nck2 adaptor
                     protein; cd11902"
                     /db_xref="CDD:212835"
     Site            order(120,122,125,129,147..148,161,163..164)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212835"
     Region          198..256
                     /region_name="SH3_Nck2_3"
                     /note="Third Src Homology 3 domain of Nck2 adaptor
                     protein; cd11903"
                     /db_xref="CDD:212836"
     Site            order(204,206,209,213,233..234,248,250..251)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212836"
     Site            order(235,249..250,252..254)
                     /site_type="other"
                     /note="Lim4 domain interface [polypeptide binding]"
                     /db_xref="CDD:212836"
     Region          279..376
                     /region_name="SH2_Nck2"
                     /note="Src homology 2 (SH2) domain found in Nck; cd10409"
                     /db_xref="CDD:198272"
     Site            order(288,307,309..311,317,330)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198272"
     Site            order(329,340,343,360..362)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198272"
     CDS             1..376
                     /gene="NCK2"
                     /coded_by="XM_061155332.1:282..1412"
                     /db_xref="GeneID:133064848"
ORIGIN      
        1 mteeviviak wdytaqqdqe ldikknerlw llddsktwwr vrnaanrtgy vpsnyverkn
       61 slkkgslvkn ikdtlglgrt rrktsardas ptpstdaefp angggadriy dlsipavvkf
      121 ayaaeredel slvkgsrvtv mekcsdgwwr gsyngqvgwf psnyvleeld eaagdapggs
      181 slrpgatlsn gqgaralqvv qtlypfssvt eeelnfdkge tmeviekpen dpewwrcrna
      241 rgqvglvpkn yvvvlsegpa phagsgptgp aragrfagre wyygnvtrhq aecalnargv
      301 qgdflvrdse sspsdfsvsl kasgknkhfk vqlvdnvyci gqrrfhtmde lvehykkapi
      361 ftsehgekly lvralq
//
LOCUS       XP_061011316             376 aa            linear   MAM 02-DEC-2023
DEFINITION  cytoplasmic protein NCK2 [Dama dama].
ACCESSION   XP_061011316
VERSION     XP_061011316.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155333.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..376
                     /product="cytoplasmic protein NCK2"
                     /calculated_mol_wt=41811
     Region          2..59
                     /region_name="SH3_Nck2_1"
                     /note="First Src Homology 3 domain of Nck2 adaptor
                     protein; cd11899"
                     /db_xref="CDD:212832"
     Site            order(13,16..17,19..20,36..38,50,52..55)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212832"
     Region          114..168
                     /region_name="SH3_Nck2_2"
                     /note="Second Src Homology 3 domain of Nck2 adaptor
                     protein; cd11902"
                     /db_xref="CDD:212835"
     Site            order(120,122,125,129,147..148,161,163..164)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212835"
     Region          198..256
                     /region_name="SH3_Nck2_3"
                     /note="Third Src Homology 3 domain of Nck2 adaptor
                     protein; cd11903"
                     /db_xref="CDD:212836"
     Site            order(204,206,209,213,233..234,248,250..251)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212836"
     Site            order(235,249..250,252..254)
                     /site_type="other"
                     /note="Lim4 domain interface [polypeptide binding]"
                     /db_xref="CDD:212836"
     Region          279..376
                     /region_name="SH2_Nck2"
                     /note="Src homology 2 (SH2) domain found in Nck; cd10409"
                     /db_xref="CDD:198272"
     Site            order(288,307,309..311,317,330)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198272"
     Site            order(329,340,343,360..362)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198272"
     CDS             1..376
                     /gene="NCK2"
                     /coded_by="XM_061155333.1:288..1418"
                     /db_xref="GeneID:133064848"
ORIGIN      
        1 mteeviviak wdytaqqdqe ldikknerlw llddsktwwr vrnaanrtgy vpsnyverkn
       61 slkkgslvkn ikdtlglgrt rrktsardas ptpstdaefp angggadriy dlsipavvkf
      121 ayaaeredel slvkgsrvtv mekcsdgwwr gsyngqvgwf psnyvleeld eaagdapggs
      181 slrpgatlsn gqgaralqvv qtlypfssvt eeelnfdkge tmeviekpen dpewwrcrna
      241 rgqvglvpkn yvvvlsegpa phagsgptgp aragrfagre wyygnvtrhq aecalnargv
      301 qgdflvrdse sspsdfsvsl kasgknkhfk vqlvdnvyci gqrrfhtmde lvehykkapi
      361 ftsehgekly lvralq
//
LOCUS       XP_061011317             376 aa            linear   MAM 02-DEC-2023
DEFINITION  cytoplasmic protein NCK2 [Dama dama].
ACCESSION   XP_061011317
VERSION     XP_061011317.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155334.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..376
                     /product="cytoplasmic protein NCK2"
                     /calculated_mol_wt=41811
     Region          2..59
                     /region_name="SH3_Nck2_1"
                     /note="First Src Homology 3 domain of Nck2 adaptor
                     protein; cd11899"
                     /db_xref="CDD:212832"
     Site            order(13,16..17,19..20,36..38,50,52..55)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212832"
     Region          114..168
                     /region_name="SH3_Nck2_2"
                     /note="Second Src Homology 3 domain of Nck2 adaptor
                     protein; cd11902"
                     /db_xref="CDD:212835"
     Site            order(120,122,125,129,147..148,161,163..164)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212835"
     Region          198..256
                     /region_name="SH3_Nck2_3"
                     /note="Third Src Homology 3 domain of Nck2 adaptor
                     protein; cd11903"
                     /db_xref="CDD:212836"
     Site            order(204,206,209,213,233..234,248,250..251)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212836"
     Site            order(235,249..250,252..254)
                     /site_type="other"
                     /note="Lim4 domain interface [polypeptide binding]"
                     /db_xref="CDD:212836"
     Region          279..376
                     /region_name="SH2_Nck2"
                     /note="Src homology 2 (SH2) domain found in Nck; cd10409"
                     /db_xref="CDD:198272"
     Site            order(288,307,309..311,317,330)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198272"
     Site            order(329,340,343,360..362)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198272"
     CDS             1..376
                     /gene="NCK2"
                     /coded_by="XM_061155334.1:280..1410"
                     /db_xref="GeneID:133064848"
ORIGIN      
        1 mteeviviak wdytaqqdqe ldikknerlw llddsktwwr vrnaanrtgy vpsnyverkn
       61 slkkgslvkn ikdtlglgrt rrktsardas ptpstdaefp angggadriy dlsipavvkf
      121 ayaaeredel slvkgsrvtv mekcsdgwwr gsyngqvgwf psnyvleeld eaagdapggs
      181 slrpgatlsn gqgaralqvv qtlypfssvt eeelnfdkge tmeviekpen dpewwrcrna
      241 rgqvglvpkn yvvvlsegpa phagsgptgp aragrfagre wyygnvtrhq aecalnargv
      301 qgdflvrdse sspsdfsvsl kasgknkhfk vqlvdnvyci gqrrfhtmde lvehykkapi
      361 ftsehgekly lvralq
//
LOCUS       XP_061011318             262 aa            linear   MAM 02-DEC-2023
DEFINITION  augurin isoform X1 [Dama dama].
ACCESSION   XP_061011318
VERSION     XP_061011318.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155335.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..262
                     /product="augurin isoform X1"
                     /calculated_mol_wt=29005
     Region          <2..193
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          147..262
                     /region_name="Augurin"
                     /note="Oesophageal cancer-related gene 4; pfam15187"
                     /db_xref="CDD:464552"
     CDS             1..262
                     /gene="ECRG4"
                     /coded_by="XM_061155335.1:16..804"
                     /db_xref="GeneID:133064849"
ORIGIN      
        1 mtrplpgqpn lscpssaifg gpgagspaas eelrpergar rlgtdgwpaa rqhsarlpgp
       61 apartrgppa rpvpssaafq ravrrrrvlq nkrlpypsra vakaraslyr asaatmatss
      121 arpaflvmta lalllllcvg pggisgnklk lllrkreapa pttppvavqe srakeflsgl
      181 rrpkrqlwdr srpevqqwyq qflylgfdea kfeddisywl nrnrnghdyy dyyqrhyded
      241 aaigprsahs frhgasvnyd dy
//
LOCUS       XP_061011319             254 aa            linear   MAM 02-DEC-2023
DEFINITION  augurin isoform X2 [Dama dama].
ACCESSION   XP_061011319
VERSION     XP_061011319.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155336.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..254
                     /product="augurin isoform X2"
                     /calculated_mol_wt=28272
     Region          <2..>106
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          147..254
                     /region_name="Augurin"
                     /note="Oesophageal cancer-related gene 4; pfam15187"
                     /db_xref="CDD:464552"
     CDS             1..254
                     /gene="ECRG4"
                     /coded_by="XM_061155336.1:16..780"
                     /db_xref="GeneID:133064849"
ORIGIN      
        1 mtrplpgqpn lscpssaifg gpgagspaas eelrpergar rlgtdgwpaa rqhsarlpgp
       61 apartrgppa rpvpssaafq ravrrrrvlq nkrlpypsra vakaraslyr asaatmatss
      121 arpaflvmta lalllllcvg pggisgnklk lllrkrevav qesrakefls glrrpkrqlw
      181 drsrpevqqw yqqflylgfd eakfeddisy wlnrnrnghd yydyyqrhyd edaaigprsa
      241 hsfrhgasvn yddy
//
LOCUS       XP_061011320             425 aa            linear   MAM 02-DEC-2023
DEFINITION  UDP-glucuronic acid decarboxylase 1 isoform X1 [Dama dama].
ACCESSION   XP_061011320
VERSION     XP_061011320.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155337.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..425
                     /product="UDP-glucuronic acid decarboxylase 1 isoform X1"
                     /calculated_mol_wt=48002
     Region          5..83
                     /region_name="UXS1_N"
                     /note="UDP-glucuronate decarboxylase N-terminal;
                     pfam11803"
                     /db_xref="CDD:463356"
     Region          94..397
                     /region_name="UGD_SDR_e"
                     /note="UDP-glucuronate decarboxylase (UGD) and related
                     proteins, extended (e) SDRs; cd05230"
                     /db_xref="CDD:187541"
     Site            order(100,102..105,124..129,148..150,164..168,183,
                     205..207,236,240,263..266,277)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:187541"
     Site            order(153..154,189..190,193..194,196..197,250)
                     /site_type="other"
                     /note="putative substrate binding site 2 [chemical
                     binding]"
                     /db_xref="CDD:187541"
     Site            order(170,233,265,276..278,281..282,293..295,300,302,336,
                     362,366)
                     /site_type="other"
                     /note="putative substrate binding site 1 [chemical
                     binding]"
                     /db_xref="CDD:187541"
     Site            order(184,207,236,240)
                     /site_type="active"
                     /db_xref="CDD:187541"
     CDS             1..425
                     /gene="UXS1"
                     /coded_by="XM_061155337.1:46..1323"
                     /db_xref="GeneID:133064851"
ORIGIN      
        1 mlsqpllrla savsrrrmkl llgiallayv asvwgnlvnm svllnrsiqe ngelriesri
       61 eeiieplrek irdleksftq kyppvkflse kdrkrilvtg gagfvgshlt dklmmdghev
      121 tvvdnfftgr krnvehwigh enfelinhdv veplyievdq iyhlaspasp pnymynpikt
      181 lktntigtln mlglakrvga rlllastsev ygdpevhpqt edywghvnpi gpracydegk
      241 rvaetmcyay mkqegvevrv arifntfgpr mhmndgrvvs nfilqalqge pltvygsgsq
      301 trafqyvsdl vnglvalmns nvsspvnlgn peehtilefa qliknlvgsg seiqflseaq
      361 ddpqkrkpdi kkaklmlgwe pvvpleegln kaihyfrkel eyqannqyip kpkparikkg
      421 rtrhn
//
LOCUS       XP_061011321             420 aa            linear   MAM 02-DEC-2023
DEFINITION  UDP-glucuronic acid decarboxylase 1 isoform X2 [Dama dama].
ACCESSION   XP_061011321
VERSION     XP_061011321.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155338.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..420
                     /product="UDP-glucuronic acid decarboxylase 1 isoform X2"
                     /calculated_mol_wt=47476
     Region          5..78
                     /region_name="UXS1_N"
                     /note="UDP-glucuronate decarboxylase N-terminal;
                     pfam11803"
                     /db_xref="CDD:463356"
     Region          89..392
                     /region_name="UGD_SDR_e"
                     /note="UDP-glucuronate decarboxylase (UGD) and related
                     proteins, extended (e) SDRs; cd05230"
                     /db_xref="CDD:187541"
     Site            order(95,97..100,119..124,143..145,159..163,178,200..202,
                     231,235,258..261,272)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:187541"
     Site            order(148..149,184..185,188..189,191..192,245)
                     /site_type="other"
                     /note="putative substrate binding site 2 [chemical
                     binding]"
                     /db_xref="CDD:187541"
     Site            order(165,228,260,271..273,276..277,288..290,295,297,331,
                     357,361)
                     /site_type="other"
                     /note="putative substrate binding site 1 [chemical
                     binding]"
                     /db_xref="CDD:187541"
     Site            order(179,202,231,235)
                     /site_type="active"
                     /db_xref="CDD:187541"
     CDS             1..420
                     /gene="UXS1"
                     /coded_by="XM_061155338.1:46..1308"
                     /db_xref="GeneID:133064851"
ORIGIN      
        1 mlsqpllrla savsrrrmkl llgiallayv asvwgnlvnm rsiqengelr iesrieeiie
       61 plrekirdle ksftqkyppv kflsekdrkr ilvtggagfv gshltdklmm dghevtvvdn
      121 fftgrkrnve hwighenfel inhdvveply ievdqiyhla spasppnymy npiktlktnt
      181 igtlnmlgla krvgarllla stsevygdpe vhpqtedywg hvnpigprac ydegkrvaet
      241 mcyaymkqeg vevrvarifn tfgprmhmnd grvvsnfilq alqgepltvy gsgsqtrafq
      301 yvsdlvnglv almnsnvssp vnlgnpeeht ilefaqlikn lvgsgseiqf lseaqddpqk
      361 rkpdikkakl mlgwepvvpl eeglnkaihy frkeleyqan nqyipkpkpa rikkgrtrhn
//
LOCUS       XP_061011322             405 aa            linear   MAM 02-DEC-2023
DEFINITION  UDP-glucuronic acid decarboxylase 1 isoform X3 [Dama dama].
ACCESSION   XP_061011322
VERSION     XP_061011322.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155339.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..405
                     /product="UDP-glucuronic acid decarboxylase 1 isoform X3"
                     /calculated_mol_wt=45959
     Region          5..83
                     /region_name="UXS1_N"
                     /note="UDP-glucuronate decarboxylase N-terminal;
                     pfam11803"
                     /db_xref="CDD:463356"
     Region          94..377
                     /region_name="UGD_SDR_e"
                     /note="UDP-glucuronate decarboxylase (UGD) and related
                     proteins, extended (e) SDRs; cd05230"
                     /db_xref="CDD:187541"
     Site            order(100,102..105,124..129,148..150,164..168,183,216,220,
                     243..246,257)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:187541"
     Site            order(170,213,245,256..258,261..262,273..275,280,282,316,
                     342,346)
                     /site_type="other"
                     /note="putative substrate binding site 1 [chemical
                     binding]"
                     /db_xref="CDD:187541"
     CDS             1..405
                     /gene="UXS1"
                     /coded_by="XM_061155339.1:46..1263"
                     /db_xref="GeneID:133064851"
ORIGIN      
        1 mlsqpllrla savsrrrmkl llgiallayv asvwgnlvnm svllnrsiqe ngelriesri
       61 eeiieplrek irdleksftq kyppvkflse kdrkrilvtg gagfvgshlt dklmmdghev
      121 tvvdnfftgr krnvehwigh enfelinhdv veplyievdq iyhlaspasp pnymynpikt
      181 lktntigtln mldpevhpqt edywghvnpi gpracydegk rvaetmcyay mkqegvevrv
      241 arifntfgpr mhmndgrvvs nfilqalqge pltvygsgsq trafqyvsdl vnglvalmns
      301 nvsspvnlgn peehtilefa qliknlvgsg seiqflseaq ddpqkrkpdi kkaklmlgwe
      361 pvvpleegln kaihyfrkel eyqannqyip kpkparikkg rtrhn
//
LOCUS       XP_061011323             495 aa            linear   MAM 02-DEC-2023
DEFINITION  beta-galactoside alpha-2,6-sialyltransferase 2 [Dama dama].
ACCESSION   XP_061011323
VERSION     XP_061011323.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155340.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..495
                     /product="beta-galactoside alpha-2,6-sialyltransferase 2"
                     /calculated_mol_wt=55174
     Region          222..485
                     /region_name="GT29"
                     /note="glycosyltransferase family 29; cl45931"
                     /db_xref="CDD:480271"
     Site            order(272..274,295..296,317,407..409,427..428,437..439,
                     455)
                     /site_type="active"
                     /db_xref="CDD:467690"
     CDS             1..495
                     /gene="ST6GAL2"
                     /coded_by="XM_061155340.1:319..1806"
                     /db_xref="GeneID:133064852"
ORIGIN      
        1 mkphlkqwrq gmlcgvfawg llfvviflyf tdsspakpap ssfsfletrr llpaqgrqra
       61 imgaseglpe gadsrrgspr glpsgplrtw agdgfeheqe flsaqtgrts lsaflpedpa
      121 pgtsgrlspg dpgperaqpp ravlgrrakr gprrqgrsag gedgerlyss msrallrrlw
      181 kgdasarmlh prlqkamgay lrankhgvrf rgrraagrsr tellcalrgr vqvrtldgte
      241 ppfsalgwra lvppvplsrl lprrlrtcav vtsagailns slgeeidshd avlrfnsapt
      301 rgyekdvgnk ttlriinsqi ltnpsyhfmd salykdvilv awdpapysan lnlwykkpdy
      361 nlftpyvqhr qrnpnqpfyi lhpkfiwqlw diiqentkek iqpnppssgf igillmmnlc
      421 gevhvyeyvp svrqtdlchy hepyhdaact lgayhpllye kllvqrlnvg tqgdlhrkgk
      481 vvlpglqavr cppga
//
LOCUS       XP_061011324             495 aa            linear   MAM 02-DEC-2023
DEFINITION  beta-galactoside alpha-2,6-sialyltransferase 2 [Dama dama].
ACCESSION   XP_061011324
VERSION     XP_061011324.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155341.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..495
                     /product="beta-galactoside alpha-2,6-sialyltransferase 2"
                     /calculated_mol_wt=55174
     Region          222..485
                     /region_name="GT29"
                     /note="glycosyltransferase family 29; cl45931"
                     /db_xref="CDD:480271"
     Site            order(272..274,295..296,317,407..409,427..428,437..439,
                     455)
                     /site_type="active"
                     /db_xref="CDD:467690"
     CDS             1..495
                     /gene="ST6GAL2"
                     /coded_by="XM_061155341.1:405..1892"
                     /db_xref="GeneID:133064852"
ORIGIN      
        1 mkphlkqwrq gmlcgvfawg llfvviflyf tdsspakpap ssfsfletrr llpaqgrqra
       61 imgaseglpe gadsrrgspr glpsgplrtw agdgfeheqe flsaqtgrts lsaflpedpa
      121 pgtsgrlspg dpgperaqpp ravlgrrakr gprrqgrsag gedgerlyss msrallrrlw
      181 kgdasarmlh prlqkamgay lrankhgvrf rgrraagrsr tellcalrgr vqvrtldgte
      241 ppfsalgwra lvppvplsrl lprrlrtcav vtsagailns slgeeidshd avlrfnsapt
      301 rgyekdvgnk ttlriinsqi ltnpsyhfmd salykdvilv awdpapysan lnlwykkpdy
      361 nlftpyvqhr qrnpnqpfyi lhpkfiwqlw diiqentkek iqpnppssgf igillmmnlc
      421 gevhvyeyvp svrqtdlchy hepyhdaact lgayhpllye kllvqrlnvg tqgdlhrkgk
      481 vvlpglqavr cppga
//
LOCUS       XP_061011325             495 aa            linear   MAM 02-DEC-2023
DEFINITION  beta-galactoside alpha-2,6-sialyltransferase 2 [Dama dama].
ACCESSION   XP_061011325
VERSION     XP_061011325.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155342.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..495
                     /product="beta-galactoside alpha-2,6-sialyltransferase 2"
                     /calculated_mol_wt=55174
     Region          222..485
                     /region_name="GT29"
                     /note="glycosyltransferase family 29; cl45931"
                     /db_xref="CDD:480271"
     Site            order(272..274,295..296,317,407..409,427..428,437..439,
                     455)
                     /site_type="active"
                     /db_xref="CDD:467690"
     CDS             1..495
                     /gene="ST6GAL2"
                     /coded_by="XM_061155342.1:155..1642"
                     /db_xref="GeneID:133064852"
ORIGIN      
        1 mkphlkqwrq gmlcgvfawg llfvviflyf tdsspakpap ssfsfletrr llpaqgrqra
       61 imgaseglpe gadsrrgspr glpsgplrtw agdgfeheqe flsaqtgrts lsaflpedpa
      121 pgtsgrlspg dpgperaqpp ravlgrrakr gprrqgrsag gedgerlyss msrallrrlw
      181 kgdasarmlh prlqkamgay lrankhgvrf rgrraagrsr tellcalrgr vqvrtldgte
      241 ppfsalgwra lvppvplsrl lprrlrtcav vtsagailns slgeeidshd avlrfnsapt
      301 rgyekdvgnk ttlriinsqi ltnpsyhfmd salykdvilv awdpapysan lnlwykkpdy
      361 nlftpyvqhr qrnpnqpfyi lhpkfiwqlw diiqentkek iqpnppssgf igillmmnlc
      421 gevhvyeyvp svrqtdlchy hepyhdaact lgayhpllye kllvqrlnvg tqgdlhrkgk
      481 vvlpglqavr cppga
//
LOCUS       XP_061011326             495 aa            linear   MAM 02-DEC-2023
DEFINITION  beta-galactoside alpha-2,6-sialyltransferase 2 [Dama dama].
ACCESSION   XP_061011326
VERSION     XP_061011326.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155343.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..495
                     /product="beta-galactoside alpha-2,6-sialyltransferase 2"
                     /calculated_mol_wt=55174
     Region          222..485
                     /region_name="GT29"
                     /note="glycosyltransferase family 29; cl45931"
                     /db_xref="CDD:480271"
     Site            order(272..274,295..296,317,407..409,427..428,437..439,
                     455)
                     /site_type="active"
                     /db_xref="CDD:467690"
     CDS             1..495
                     /gene="ST6GAL2"
                     /coded_by="XM_061155343.1:297..1784"
                     /db_xref="GeneID:133064852"
ORIGIN      
        1 mkphlkqwrq gmlcgvfawg llfvviflyf tdsspakpap ssfsfletrr llpaqgrqra
       61 imgaseglpe gadsrrgspr glpsgplrtw agdgfeheqe flsaqtgrts lsaflpedpa
      121 pgtsgrlspg dpgperaqpp ravlgrrakr gprrqgrsag gedgerlyss msrallrrlw
      181 kgdasarmlh prlqkamgay lrankhgvrf rgrraagrsr tellcalrgr vqvrtldgte
      241 ppfsalgwra lvppvplsrl lprrlrtcav vtsagailns slgeeidshd avlrfnsapt
      301 rgyekdvgnk ttlriinsqi ltnpsyhfmd salykdvilv awdpapysan lnlwykkpdy
      361 nlftpyvqhr qrnpnqpfyi lhpkfiwqlw diiqentkek iqpnppssgf igillmmnlc
      421 gevhvyeyvp svrqtdlchy hepyhdaact lgayhpllye kllvqrlnvg tqgdlhrkgk
      481 vvlpglqavr cppga
//
LOCUS       XP_061011327             495 aa            linear   MAM 02-DEC-2023
DEFINITION  beta-galactoside alpha-2,6-sialyltransferase 2 [Dama dama].
ACCESSION   XP_061011327
VERSION     XP_061011327.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155344.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..495
                     /product="beta-galactoside alpha-2,6-sialyltransferase 2"
                     /calculated_mol_wt=55174
     Region          222..485
                     /region_name="GT29"
                     /note="glycosyltransferase family 29; cl45931"
                     /db_xref="CDD:480271"
     Site            order(272..274,295..296,317,407..409,427..428,437..439,
                     455)
                     /site_type="active"
                     /db_xref="CDD:467690"
     CDS             1..495
                     /gene="ST6GAL2"
                     /coded_by="XM_061155344.1:211..1698"
                     /db_xref="GeneID:133064852"
ORIGIN      
        1 mkphlkqwrq gmlcgvfawg llfvviflyf tdsspakpap ssfsfletrr llpaqgrqra
       61 imgaseglpe gadsrrgspr glpsgplrtw agdgfeheqe flsaqtgrts lsaflpedpa
      121 pgtsgrlspg dpgperaqpp ravlgrrakr gprrqgrsag gedgerlyss msrallrrlw
      181 kgdasarmlh prlqkamgay lrankhgvrf rgrraagrsr tellcalrgr vqvrtldgte
      241 ppfsalgwra lvppvplsrl lprrlrtcav vtsagailns slgeeidshd avlrfnsapt
      301 rgyekdvgnk ttlriinsqi ltnpsyhfmd salykdvilv awdpapysan lnlwykkpdy
      361 nlftpyvqhr qrnpnqpfyi lhpkfiwqlw diiqentkek iqpnppssgf igillmmnlc
      421 gevhvyeyvp svrqtdlchy hepyhdaact lgayhpllye kllvqrlnvg tqgdlhrkgk
      481 vvlpglqavr cppga
//
LOCUS       XP_061011328             495 aa            linear   MAM 02-DEC-2023
DEFINITION  beta-galactoside alpha-2,6-sialyltransferase 2 [Dama dama].
ACCESSION   XP_061011328
VERSION     XP_061011328.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155345.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..495
                     /product="beta-galactoside alpha-2,6-sialyltransferase 2"
                     /calculated_mol_wt=55174
     Region          222..485
                     /region_name="GT29"
                     /note="glycosyltransferase family 29; cl45931"
                     /db_xref="CDD:480271"
     Site            order(272..274,295..296,317,407..409,427..428,437..439,
                     455)
                     /site_type="active"
                     /db_xref="CDD:467690"
     CDS             1..495
                     /gene="ST6GAL2"
                     /coded_by="XM_061155345.1:164..1651"
                     /db_xref="GeneID:133064852"
ORIGIN      
        1 mkphlkqwrq gmlcgvfawg llfvviflyf tdsspakpap ssfsfletrr llpaqgrqra
       61 imgaseglpe gadsrrgspr glpsgplrtw agdgfeheqe flsaqtgrts lsaflpedpa
      121 pgtsgrlspg dpgperaqpp ravlgrrakr gprrqgrsag gedgerlyss msrallrrlw
      181 kgdasarmlh prlqkamgay lrankhgvrf rgrraagrsr tellcalrgr vqvrtldgte
      241 ppfsalgwra lvppvplsrl lprrlrtcav vtsagailns slgeeidshd avlrfnsapt
      301 rgyekdvgnk ttlriinsqi ltnpsyhfmd salykdvilv awdpapysan lnlwykkpdy
      361 nlftpyvqhr qrnpnqpfyi lhpkfiwqlw diiqentkek iqpnppssgf igillmmnlc
      421 gevhvyeyvp svrqtdlchy hepyhdaact lgayhpllye kllvqrlnvg tqgdlhrkgk
      481 vvlpglqavr cppga
//
LOCUS       XP_061011329             495 aa            linear   MAM 02-DEC-2023
DEFINITION  beta-galactoside alpha-2,6-sialyltransferase 2 [Dama dama].
ACCESSION   XP_061011329
VERSION     XP_061011329.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155346.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..495
                     /product="beta-galactoside alpha-2,6-sialyltransferase 2"
                     /calculated_mol_wt=55174
     Region          222..485
                     /region_name="GT29"
                     /note="glycosyltransferase family 29; cl45931"
                     /db_xref="CDD:480271"
     Site            order(272..274,295..296,317,407..409,427..428,437..439,
                     455)
                     /site_type="active"
                     /db_xref="CDD:467690"
     CDS             1..495
                     /gene="ST6GAL2"
                     /coded_by="XM_061155346.1:365..1852"
                     /db_xref="GeneID:133064852"
ORIGIN      
        1 mkphlkqwrq gmlcgvfawg llfvviflyf tdsspakpap ssfsfletrr llpaqgrqra
       61 imgaseglpe gadsrrgspr glpsgplrtw agdgfeheqe flsaqtgrts lsaflpedpa
      121 pgtsgrlspg dpgperaqpp ravlgrrakr gprrqgrsag gedgerlyss msrallrrlw
      181 kgdasarmlh prlqkamgay lrankhgvrf rgrraagrsr tellcalrgr vqvrtldgte
      241 ppfsalgwra lvppvplsrl lprrlrtcav vtsagailns slgeeidshd avlrfnsapt
      301 rgyekdvgnk ttlriinsqi ltnpsyhfmd salykdvilv awdpapysan lnlwykkpdy
      361 nlftpyvqhr qrnpnqpfyi lhpkfiwqlw diiqentkek iqpnppssgf igillmmnlc
      421 gevhvyeyvp svrqtdlchy hepyhdaact lgayhpllye kllvqrlnvg tqgdlhrkgk
      481 vvlpglqavr cppga
//
LOCUS       XP_061011330             495 aa            linear   MAM 02-DEC-2023
DEFINITION  beta-galactoside alpha-2,6-sialyltransferase 2 [Dama dama].
ACCESSION   XP_061011330
VERSION     XP_061011330.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155347.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..495
                     /product="beta-galactoside alpha-2,6-sialyltransferase 2"
                     /calculated_mol_wt=55174
     Region          222..485
                     /region_name="GT29"
                     /note="glycosyltransferase family 29; cl45931"
                     /db_xref="CDD:480271"
     Site            order(272..274,295..296,317,407..409,427..428,437..439,
                     455)
                     /site_type="active"
                     /db_xref="CDD:467690"
     CDS             1..495
                     /gene="ST6GAL2"
                     /coded_by="XM_061155347.1:257..1744"
                     /db_xref="GeneID:133064852"
ORIGIN      
        1 mkphlkqwrq gmlcgvfawg llfvviflyf tdsspakpap ssfsfletrr llpaqgrqra
       61 imgaseglpe gadsrrgspr glpsgplrtw agdgfeheqe flsaqtgrts lsaflpedpa
      121 pgtsgrlspg dpgperaqpp ravlgrrakr gprrqgrsag gedgerlyss msrallrrlw
      181 kgdasarmlh prlqkamgay lrankhgvrf rgrraagrsr tellcalrgr vqvrtldgte
      241 ppfsalgwra lvppvplsrl lprrlrtcav vtsagailns slgeeidshd avlrfnsapt
      301 rgyekdvgnk ttlriinsqi ltnpsyhfmd salykdvilv awdpapysan lnlwykkpdy
      361 nlftpyvqhr qrnpnqpfyi lhpkfiwqlw diiqentkek iqpnppssgf igillmmnlc
      421 gevhvyeyvp svrqtdlchy hepyhdaact lgayhpllye kllvqrlnvg tqgdlhrkgk
      481 vvlpglqavr cppga
//
LOCUS       XP_061011331             580 aa            linear   MAM 02-DEC-2023
DEFINITION  high affinity choline transporter 1 isoform X1 [Dama dama].
ACCESSION   XP_061011331
VERSION     XP_061011331.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155348.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..580
                     /product="high affinity choline transporter 1 isoform X1"
                     /calculated_mol_wt=63226
     Region          8..495
                     /region_name="SLC5sbd_CHT"
                     /note="Na(+)- and Cl(-)-dependent choline cotransporter
                     CHT and related proteins; solute-binding domain; cd11474"
                     /db_xref="CDD:271368"
     Site            order(60,63,343,346..347)
                     /site_type="other"
                     /note="Na binding site [ion binding]"
                     /db_xref="CDD:271368"
     CDS             1..580
                     /gene="SLC5A7"
                     /coded_by="XM_061155348.1:386..2128"
                     /db_xref="GeneID:133064854"
ORIGIN      
        1 mdfqveglva ivvfyllill vgiwaawrtk nsgsaeerse aiivggrdig llvggftmta
       61 twvgggying taeavyvpdy glawaqapig yslslilggl ffakpmrskg yvtmldpfqq
      121 iygkrmggll fipalmgemf waaaifsalg atisviiras vhmsvivsal iatlytlvgg
      181 lysvaytdvv qlfcifvglw isvpfalsns avadigftal htkyqkpwlg tiepfeiytw
      241 ldsflllmlg gipwqayfqr vlssssatya qvlsflaafg clvmalpavl igaigastaw
      301 nqtaygplap rekqeadmil pivlkylcpv yisyfglgav saavmssads silsassmfa
      361 rniyqlsfrq nasdkeivwv mritvfvfga samtmalltk tvyglwylss dlvyiiifpq
      421 llcvlfikgt ntygaaagyv sglflrvtgg epylnlqpli fypgyyidkg giynqrfpfk
      481 tlamvtsfls nicisylaky lfesgtlppk ldvfdavvar hseenmdktv lvrnenikld
      541 elapvkprqs itlsstfthq eallemdssp egsgtednlq
//
LOCUS       XP_061011332             523 aa            linear   MAM 02-DEC-2023
DEFINITION  high affinity choline transporter 1 isoform X2 [Dama dama].
ACCESSION   XP_061011332
VERSION     XP_061011332.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155349.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..523
                     /product="high affinity choline transporter 1 isoform X2"
                     /calculated_mol_wt=57092
     Region          1..438
                     /region_name="SLC5sbd_CHT"
                     /note="Na(+)- and Cl(-)-dependent choline cotransporter
                     CHT and related proteins; solute-binding domain; cd11474"
                     /db_xref="CDD:271368"
     Site            order(3,6,286,289..290)
                     /site_type="other"
                     /note="Na binding site [ion binding]"
                     /db_xref="CDD:271368"
     CDS             1..523
                     /gene="SLC5A7"
                     /coded_by="XM_061155349.1:495..2066"
                     /db_xref="GeneID:133064854"
ORIGIN      
        1 mtatwvgggy ingtaeavyv pdyglawaqa pigyslslil gglffakpmr skgyvtmldp
       61 fqqiygkrmg gllfipalmg emfwaaaifs algatisvii rasvhmsviv saliatlytl
      121 vgglysvayt dvvqlfcifv glwisvpfal snsavadigf talhtkyqkp wlgtiepfei
      181 ytwldsflll mlggipwqay fqrvlssssa tyaqvlsfla afgclvmalp avligaigas
      241 tawnqtaygp laprekqead milpivlkyl cpvyisyfgl gavsaavmss adssilsass
      301 mfarniyqls frqnasdkei vwvmritvfv fgasamtmal ltktvyglwy lssdlvyiii
      361 fpqllcvlfi kgtntygaaa gyvsglflrv tggepylnlq plifypgyyi dkggiynqrf
      421 pfktlamvts flsnicisyl akylfesgtl ppkldvfdav varhseenmd ktvlvrneni
      481 kldelapvkp rqsitlsstf thqeallemd sspegsgted nlq
//
LOCUS       XP_061011333             298 aa            linear   MAM 02-DEC-2023
DEFINITION  sulfotransferase 1C4-like [Dama dama].
ACCESSION   XP_061011333
VERSION     XP_061011333.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155350.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..298
                     /product="sulfotransferase 1C4-like"
                     /calculated_mol_wt=34691
     Region          40..290
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; pfam00685"
                     /db_xref="CDD:425820"
     CDS             1..298
                     /gene="LOC133064855"
                     /coded_by="XM_061155350.1:522..1418"
                     /db_xref="GeneID:133064855"
ORIGIN      
        1 medlqsegms rvavdyvggi lqptptcdtw dqiwsfqarp ddmlistypk agttwtqeiv
       61 dliqnggdvd qsqrapther fpfiewivps lgsgleqana mtsprilkth lpfrllppsl
      121 leknckmiyv arnpkdnmvs yyhfhrmnri lpapgtweey fenflagkvc wgswydhvkg
      181 wwhakdqhri lylfyedmke npkheiqkla efigkslddk vldkivhhts fsvmkqnpma
      241 nytsipakfm nhlispfmrk gvvgdwknhf tvaqnerfdd dyrknmadtt ltlhfrfs
//
LOCUS       XP_061011334            1683 aa            linear   MAM 02-DEC-2023
DEFINITION  GRIP and coiled-coil domain-containing protein 2 [Dama dama].
ACCESSION   XP_061011334
VERSION     XP_061011334.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155351.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1683
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1683
                     /product="GRIP and coiled-coil domain-containing protein
                     2"
                     /calculated_mol_wt=195397
     Region          95..922
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          608..1372
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <1274..>1513
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
     Region          1547..1611
                     /region_name="Rab_bind"
                     /note="Rab binding domain; pfam16704"
                     /db_xref="CDD:435531"
     Region          1612..1655
                     /region_name="GRIP"
                     /note="GRIP domain; pfam01465"
                     /db_xref="CDD:460221"
     CDS             1..1683
                     /gene="GCC2"
                     /coded_by="XM_061155351.1:94..5145"
                     /db_xref="GeneID:133064856"
ORIGIN      
        1 meepvhdgva spaapgtgks klealpkedl ikfakkqmml iqktklrcte lekeveelrs
       61 klvaggddii kalterldal llekaeieqh cvslkkenik mkqevedsvt kledvqkele
      121 qsqrsygkei enlrnelaav hskysndkad wqkeveeaak kqlelseqlr fqsdsedyvk
      181 klqeeiqkik pafedqilcl qkqletatne keqeithlrg vieancqqyq kdinslqeel
      241 vqlksthqee vkelicqiet sakeheaevn yliqlkdnlv rkceagemni qekykyelen
      301 egkasgadqe nqvcslllke dslveqavne klrhledalk elesqhsilk deltymnnlk
      361 lkleidaqhi kdeffhered lefkinelll akeeqgyiie klkseledan kqfcctieqh
      421 nkevlslkkq hqkeitelne tflsdsekek lalmfeiqgl keqceklqqe kqeatlnyeg
      481 lreimeilqt elgesaekis qefesmkqqq afninelqqk lqtafnekda lletvtclqr
      541 endnllsqqe cvpelentik nlqeknelyl aslhqrdtml qefeakissl teekydfisk
      601 mkssheemdn lhkkcereer ltvelkekvd qtaqynsele qkvneltagl eetlkeknek
      661 nqklekltaq lktlsedqea mllevrslre ensrlssekn vlsrdleall sqkgdvtlqe
      721 qiskleeelr lavrerdnln qlleneqvqk lfvkaqlcgf leqmeskvsq ereeqdvvni
      781 lqamgeslgk ineekhnldf qydkrvvele keikllqeeh mvqceelrsl lrdyeqekgv
      841 lrkeldeall ekealqsdll emknaseqtr fenqnlliqv eevsqklyre nenhhekekd
      901 fikelenlrp lleqkeselq dvraelislk dsfkkspves dqpsvkefee kigylekeak
      961 ekeekinklk lvavkakkel essrkearml qeelesvrse rdqlstsmrd liqgaenykn
     1021 llseydkqse qldaekeran nfehqvedlt rqlrnltfqy ekltsdnedf larietlqsn
     1081 acllevqile vhkakamadk eleaeklqke qkikehassv neleelqlql qkekkqlqkt
     1141 mqelelvrkd aqqttlmnme iadyerlmre lnqklankns kiedleqeik iqkrkqetlq
     1201 eemtslqavv qqyeekntki kqllvktkke ladlrqaetd hlmlqaslkg eleasqqqve
     1261 vykiqlaevt aekhkaherl kasadqhqrt lgayqqrvsa lqeecreara eqaavtsefe
     1321 sykirvhnvl kqqknksvsq teaegakqer ehlemlidql klklqdtqns lqisaselqa
     1381 lqcehyalle rhnrvlqeav gkeaelrekl csvqsensal kaehvqtvdq ltaqhealrs
     1441 sfreqvrqlq eehgrtvetl qqqlcrleaq llqphsepat rspassqqpl rslrerrsad
     1501 lpfldvqvta reegegmett dlergspast paqsleqlls spearleppa whneftkeel
     1561 vqklnsttks adhlngllre teatnailme qikllksevr rlernqerek saanleylkn
     1621 vllqfillkp gserarllpv vdtmlqlspe ektrlaaaaq geeesgsrss gwasylhsws
     1681 glr
//
LOCUS       XP_061011335             386 aa            linear   MAM 02-DEC-2023
DEFINITION  LIM and senescent cell antigen-like-containing domain protein 1
            isoform X1 [Dama dama].
ACCESSION   XP_061011335
VERSION     XP_061011335.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155352.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..386
                     /product="LIM and senescent cell antigen-like-containing
                     domain protein 1 isoform X1"
                     /calculated_mol_wt=44110
     Region          71..129
                     /region_name="LIM1_PINCH"
                     /note="The first LIM domain of protein PINCH; cd09331"
                     /db_xref="CDD:188717"
     Site            order(71,74,93,96,99,102,120,123)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188717"
     Site            order(73..74,76,98,100..104,114..115,117,122..123,
                     125..129)
                     /site_type="other"
                     /note="ILK binding interface"
                     /db_xref="CDD:188717"
     Region          132..183
                     /region_name="LIM2_PINCH"
                     /note="The second LIM domain of protein PINCH; cd09332"
                     /db_xref="CDD:188718"
     Site            order(132,135,152,155,158,161,179,182)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188718"
     Region          196..246
                     /region_name="LIM3_PINCH"
                     /note="The third LIM domain of protein PINCH; cd09333"
                     /db_xref="CDD:188719"
     Site            order(196,199,216,219,222,225,242,245)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188719"
     Region          252..305
                     /region_name="LIM4_PINCH"
                     /note="The fourth LIM domain of protein PINCH; cd09334"
                     /db_xref="CDD:188720"
     Site            order(253,257..260)
                     /site_type="other"
                     /note="N(i)ck binding interface"
                     /db_xref="CDD:188720"
     Site            order(254,257,274,277,280,283,301,304)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188720"
     Region          313..366
                     /region_name="LIM5_PINCH"
                     /note="The fifth LIM domain of protein PINCH; cd09335"
                     /db_xref="CDD:188721"
     Site            order(313,316,333,336,339,342,361,364)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188721"
     CDS             1..386
                     /gene="LIMS1"
                     /coded_by="XM_061155352.1:22..1182"
                     /db_xref="GeneID:133064857"
ORIGIN      
        1 malrgprpav ipedqevppa arngeprglg sqderaesrv qrrhsdvrvy kefcdfyakf
       61 nmanalanas cercrggfap aekivnsnge lyheqcfvca qcfqqfpegl fyefegrkyc
      121 ehdfqmlfap cchqcgefii grvikamnns whpecfrcdl cqevladigf vknagrhlcr
      181 pchnrekarg lgkyicqkch aiideqplif kndpyhpdhf ncancgkelt adarelkgel
      241 yclpchdkmg vpicgacrrp iegrvvnamg kqwhvehfvc akcekpflgh rhyerkglay
      301 cethynqlfg dvcfhcnrvi egdvvsalnk awcvhcfacs tcsakltlkn kfvefdmkpv
      361 ckkcyekfpl elkkrlkkla etlgrk
//
LOCUS       XP_061011336             362 aa            linear   MAM 02-DEC-2023
DEFINITION  LIM and senescent cell antigen-like-containing domain protein 1
            isoform X2 [Dama dama].
ACCESSION   XP_061011336
VERSION     XP_061011336.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155353.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..362
                     /product="LIM and senescent cell antigen-like-containing
                     domain protein 1 isoform X2"
                     /calculated_mol_wt=41420
     Region          47..105
                     /region_name="LIM1_PINCH"
                     /note="The first LIM domain of protein PINCH; cd09331"
                     /db_xref="CDD:188717"
     Site            order(47,50,69,72,75,78,96,99)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188717"
     Site            order(49..50,52,74,76..80,90..91,93,98..99,101..105)
                     /site_type="other"
                     /note="ILK binding interface"
                     /db_xref="CDD:188717"
     Region          108..159
                     /region_name="LIM2_PINCH"
                     /note="The second LIM domain of protein PINCH; cd09332"
                     /db_xref="CDD:188718"
     Site            order(108,111,128,131,134,137,155,158)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188718"
     Region          172..222
                     /region_name="LIM3_PINCH"
                     /note="The third LIM domain of protein PINCH; cd09333"
                     /db_xref="CDD:188719"
     Site            order(172,175,192,195,198,201,218,221)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188719"
     Region          228..281
                     /region_name="LIM4_PINCH"
                     /note="The fourth LIM domain of protein PINCH; cd09334"
                     /db_xref="CDD:188720"
     Site            order(229,233..236)
                     /site_type="other"
                     /note="N(i)ck binding interface"
                     /db_xref="CDD:188720"
     Site            order(230,233,250,253,256,259,277,280)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188720"
     Region          289..342
                     /region_name="LIM5_PINCH"
                     /note="The fifth LIM domain of protein PINCH; cd09335"
                     /db_xref="CDD:188721"
     Site            order(289,292,309,312,315,318,337,340)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188721"
     CDS             1..362
                     /gene="LIMS1"
                     /coded_by="XM_061155353.1:46..1134"
                     /db_xref="GeneID:133064857"
ORIGIN      
        1 mtalqlkels qsglyrrrrd rpdslrlpgp reealsnman alanascerc rggfapaeki
       61 vnsngelyhe qcfvcaqcfq qfpeglfyef egrkycehdf qmlfapcchq cgefiigrvi
      121 kamnnswhpe cfrcdlcqev ladigfvkna grhlcrpchn rekarglgky icqkchaiid
      181 eqplifkndp yhpdhfncan cgkeltadar elkgelyclp chdkmgvpic gacrrpiegr
      241 vvnamgkqwh vehfvcakce kpflghrhye rkglayceth ynqlfgdvcf hcnrviegdv
      301 vsalnkawcv hcfacstcsa kltlknkfve fdmkpvckkc yekfplelkk rlkklaetlg
      361 rk
//
LOCUS       XP_061011337             337 aa            linear   MAM 02-DEC-2023
DEFINITION  LIM and senescent cell antigen-like-containing domain protein 1
            isoform X3 [Dama dama].
ACCESSION   XP_061011337
VERSION     XP_061011337.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155354.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..337
                     /product="LIM and senescent cell antigen-like-containing
                     domain protein 1 isoform X3"
                     /calculated_mol_wt=38291
     Region          22..80
                     /region_name="LIM1_PINCH"
                     /note="The first LIM domain of protein PINCH; cd09331"
                     /db_xref="CDD:188717"
     Site            order(22,25,44,47,50,53,71,74)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188717"
     Site            order(24..25,27,49,51..55,65..66,68,73..74,76..80)
                     /site_type="other"
                     /note="ILK binding interface"
                     /db_xref="CDD:188717"
     Region          83..134
                     /region_name="LIM2_PINCH"
                     /note="The second LIM domain of protein PINCH; cd09332"
                     /db_xref="CDD:188718"
     Site            order(83,86,103,106,109,112,130,133)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188718"
     Region          147..197
                     /region_name="LIM3_PINCH"
                     /note="The third LIM domain of protein PINCH; cd09333"
                     /db_xref="CDD:188719"
     Site            order(147,150,167,170,173,176,193,196)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188719"
     Region          203..256
                     /region_name="LIM4_PINCH"
                     /note="The fourth LIM domain of protein PINCH; cd09334"
                     /db_xref="CDD:188720"
     Site            order(204,208..211)
                     /site_type="other"
                     /note="N(i)ck binding interface"
                     /db_xref="CDD:188720"
     Site            order(205,208,225,228,231,234,252,255)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188720"
     Region          264..317
                     /region_name="LIM5_PINCH"
                     /note="The fifth LIM domain of protein PINCH; cd09335"
                     /db_xref="CDD:188721"
     Site            order(264,267,284,287,290,293,312,315)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188721"
     CDS             1..337
                     /gene="LIMS1"
                     /coded_by="XM_061155354.1:83..1096"
                     /db_xref="GeneID:133064857"
ORIGIN      
        1 mlgvasgmtn snmanalana scercrggfa paekivnsng elyheqcfvc aqcfqqfpeg
       61 lfyefegrky cehdfqmlfa pcchqcgefi igrvikamnn swhpecfrcd lcqevladig
      121 fvknagrhlc rpchnrekar glgkyicqkc haiideqpli fkndpyhpdh fncancgkel
      181 tadarelkge lyclpchdkm gvpicgacrr piegrvvnam gkqwhvehfv cakcekpflg
      241 hrhyerkgla ycethynqlf gdvcfhcnrv iegdvvsaln kawcvhcfac stcsakltlk
      301 nkfvefdmkp vckkcyekfp lelkkrlkkl aetlgrk
//
LOCUS       XP_061011338             325 aa            linear   MAM 02-DEC-2023
DEFINITION  LIM and senescent cell antigen-like-containing domain protein 1
            isoform X4 [Dama dama].
ACCESSION   XP_061011338
VERSION     XP_061011338.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155355.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..325
                     /product="LIM and senescent cell antigen-like-containing
                     domain protein 1 isoform X4"
                     /calculated_mol_wt=37127
     Region          10..68
                     /region_name="LIM1_PINCH"
                     /note="The first LIM domain of protein PINCH; cd09331"
                     /db_xref="CDD:188717"
     Site            order(10,13,32,35,38,41,59,62)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188717"
     Site            order(12..13,15,37,39..43,53..54,56,61..62,64..68)
                     /site_type="other"
                     /note="ILK binding interface"
                     /db_xref="CDD:188717"
     Region          71..122
                     /region_name="LIM2_PINCH"
                     /note="The second LIM domain of protein PINCH; cd09332"
                     /db_xref="CDD:188718"
     Site            order(71,74,91,94,97,100,118,121)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188718"
     Region          135..185
                     /region_name="LIM3_PINCH"
                     /note="The third LIM domain of protein PINCH; cd09333"
                     /db_xref="CDD:188719"
     Site            order(135,138,155,158,161,164,181,184)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188719"
     Region          191..244
                     /region_name="LIM4_PINCH"
                     /note="The fourth LIM domain of protein PINCH; cd09334"
                     /db_xref="CDD:188720"
     Site            order(192,196..199)
                     /site_type="other"
                     /note="N(i)ck binding interface"
                     /db_xref="CDD:188720"
     Site            order(193,196,213,216,219,222,240,243)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188720"
     Region          252..305
                     /region_name="LIM5_PINCH"
                     /note="The fifth LIM domain of protein PINCH; cd09335"
                     /db_xref="CDD:188721"
     Site            order(252,255,272,275,278,281,300,303)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188721"
     CDS             1..325
                     /gene="LIMS1"
                     /coded_by="XM_061155355.1:289..1266"
                     /db_xref="GeneID:133064857"
ORIGIN      
        1 manalanasc ercrggfapa ekivnsngel yheqcfvcaq cfqqfpeglf yefegrkyce
       61 hdfqmlfapc chqcgefiig rvikamnnsw hpecfrcdlc qevladigfv knagrhlcrp
      121 chnrekargl gkyicqkcha iideqplifk ndpyhpdhfn cancgkelta darelkgely
      181 clpchdkmgv picgacrrpi egrvvnamgk qwhvehfvca kcekpflghr hyerkglayc
      241 ethynqlfgd vcfhcnrvie gdvvsalnka wcvhcfacst csakltlknk fvefdmkpvc
      301 kkcyekfple lkkrlkklae tlgrk
//
LOCUS       XP_061011339             325 aa            linear   MAM 02-DEC-2023
DEFINITION  LIM and senescent cell antigen-like-containing domain protein 1
            isoform X4 [Dama dama].
ACCESSION   XP_061011339
VERSION     XP_061011339.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155356.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..325
                     /product="LIM and senescent cell antigen-like-containing
                     domain protein 1 isoform X4"
                     /calculated_mol_wt=37127
     Region          10..68
                     /region_name="LIM1_PINCH"
                     /note="The first LIM domain of protein PINCH; cd09331"
                     /db_xref="CDD:188717"
     Site            order(10,13,32,35,38,41,59,62)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188717"
     Site            order(12..13,15,37,39..43,53..54,56,61..62,64..68)
                     /site_type="other"
                     /note="ILK binding interface"
                     /db_xref="CDD:188717"
     Region          71..122
                     /region_name="LIM2_PINCH"
                     /note="The second LIM domain of protein PINCH; cd09332"
                     /db_xref="CDD:188718"
     Site            order(71,74,91,94,97,100,118,121)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188718"
     Region          135..185
                     /region_name="LIM3_PINCH"
                     /note="The third LIM domain of protein PINCH; cd09333"
                     /db_xref="CDD:188719"
     Site            order(135,138,155,158,161,164,181,184)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188719"
     Region          191..244
                     /region_name="LIM4_PINCH"
                     /note="The fourth LIM domain of protein PINCH; cd09334"
                     /db_xref="CDD:188720"
     Site            order(192,196..199)
                     /site_type="other"
                     /note="N(i)ck binding interface"
                     /db_xref="CDD:188720"
     Site            order(193,196,213,216,219,222,240,243)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188720"
     Region          252..305
                     /region_name="LIM5_PINCH"
                     /note="The fifth LIM domain of protein PINCH; cd09335"
                     /db_xref="CDD:188721"
     Site            order(252,255,272,275,278,281,300,303)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188721"
     CDS             1..325
                     /gene="LIMS1"
                     /coded_by="XM_061155356.1:207..1184"
                     /db_xref="GeneID:133064857"
ORIGIN      
        1 manalanasc ercrggfapa ekivnsngel yheqcfvcaq cfqqfpeglf yefegrkyce
       61 hdfqmlfapc chqcgefiig rvikamnnsw hpecfrcdlc qevladigfv knagrhlcrp
      121 chnrekargl gkyicqkcha iideqplifk ndpyhpdhfn cancgkelta darelkgely
      181 clpchdkmgv picgacrrpi egrvvnamgk qwhvehfvca kcekpflghr hyerkglayc
      241 ethynqlfgd vcfhcnrvie gdvvsalnka wcvhcfacst csakltlknk fvefdmkpvc
      301 kkcyekfple lkkrlkklae tlgrk
//
LOCUS       XP_061011340             325 aa            linear   MAM 02-DEC-2023
DEFINITION  LIM and senescent cell antigen-like-containing domain protein 1
            isoform X4 [Dama dama].
ACCESSION   XP_061011340
VERSION     XP_061011340.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155357.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..325
                     /product="LIM and senescent cell antigen-like-containing
                     domain protein 1 isoform X4"
                     /calculated_mol_wt=37127
     Region          10..68
                     /region_name="LIM1_PINCH"
                     /note="The first LIM domain of protein PINCH; cd09331"
                     /db_xref="CDD:188717"
     Site            order(10,13,32,35,38,41,59,62)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188717"
     Site            order(12..13,15,37,39..43,53..54,56,61..62,64..68)
                     /site_type="other"
                     /note="ILK binding interface"
                     /db_xref="CDD:188717"
     Region          71..122
                     /region_name="LIM2_PINCH"
                     /note="The second LIM domain of protein PINCH; cd09332"
                     /db_xref="CDD:188718"
     Site            order(71,74,91,94,97,100,118,121)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188718"
     Region          135..185
                     /region_name="LIM3_PINCH"
                     /note="The third LIM domain of protein PINCH; cd09333"
                     /db_xref="CDD:188719"
     Site            order(135,138,155,158,161,164,181,184)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188719"
     Region          191..244
                     /region_name="LIM4_PINCH"
                     /note="The fourth LIM domain of protein PINCH; cd09334"
                     /db_xref="CDD:188720"
     Site            order(192,196..199)
                     /site_type="other"
                     /note="N(i)ck binding interface"
                     /db_xref="CDD:188720"
     Site            order(193,196,213,216,219,222,240,243)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188720"
     Region          252..305
                     /region_name="LIM5_PINCH"
                     /note="The fifth LIM domain of protein PINCH; cd09335"
                     /db_xref="CDD:188721"
     Site            order(252,255,272,275,278,281,300,303)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188721"
     CDS             1..325
                     /gene="LIMS1"
                     /coded_by="XM_061155357.1:101..1078"
                     /db_xref="GeneID:133064857"
ORIGIN      
        1 manalanasc ercrggfapa ekivnsngel yheqcfvcaq cfqqfpeglf yefegrkyce
       61 hdfqmlfapc chqcgefiig rvikamnnsw hpecfrcdlc qevladigfv knagrhlcrp
      121 chnrekargl gkyicqkcha iideqplifk ndpyhpdhfn cancgkelta darelkgely
      181 clpchdkmgv picgacrrpi egrvvnamgk qwhvehfvca kcekpflghr hyerkglayc
      241 ethynqlfgd vcfhcnrvie gdvvsalnka wcvhcfacst csakltlknk fvefdmkpvc
      301 kkcyekfple lkkrlkklae tlgrk
//
LOCUS       XP_061011341             397 aa            linear   MAM 02-DEC-2023
DEFINITION  LIM and senescent cell antigen-like-containing domain protein 1
            isoform X5 [Dama dama].
ACCESSION   XP_061011341
VERSION     XP_061011341.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155358.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..397
                     /product="LIM and senescent cell antigen-like-containing
                     domain protein 1 isoform X5"
                     /calculated_mol_wt=45514
     Region          71..129
                     /region_name="LIM1_PINCH"
                     /note="The first LIM domain of protein PINCH; cd09331"
                     /db_xref="CDD:188717"
     Site            order(71,74,93,96,99,102,120,123)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188717"
     Site            order(73..74,76,98,100..104,114..115,117,122..123,
                     125..129)
                     /site_type="other"
                     /note="ILK binding interface"
                     /db_xref="CDD:188717"
     Region          132..183
                     /region_name="LIM2_PINCH"
                     /note="The second LIM domain of protein PINCH; cd09332"
                     /db_xref="CDD:188718"
     Site            order(132,135,152,155,158,161,179,182)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188718"
     Region          196..246
                     /region_name="LIM3_PINCH"
                     /note="The third LIM domain of protein PINCH; cd09333"
                     /db_xref="CDD:188719"
     Site            order(196,199,216,219,222,225,242,245)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188719"
     Region          252..305
                     /region_name="LIM4_PINCH"
                     /note="The fourth LIM domain of protein PINCH; cd09334"
                     /db_xref="CDD:188720"
     Site            order(253,257..260)
                     /site_type="other"
                     /note="N(i)ck binding interface"
                     /db_xref="CDD:188720"
     Site            order(254,257,274,277,280,283,301,304)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188720"
     Region          313..366
                     /region_name="LIM5_PINCH"
                     /note="The fifth LIM domain of protein PINCH; cd09335"
                     /db_xref="CDD:188721"
     Site            order(313,316,333,336,339,342,361,364)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188721"
     CDS             1..397
                     /gene="LIMS1"
                     /coded_by="XM_061155358.1:22..1215"
                     /db_xref="GeneID:133064857"
ORIGIN      
        1 malrgprpav ipedqevppa arngeprglg sqderaesrv qrrhsdvrvy kefcdfyakf
       61 nmanalanas cercrggfap aekivnsnge lyheqcfvca qcfqqfpegl fyefegrkyc
      121 ehdfqmlfap cchqcgefii grvikamnns whpecfrcdl cqevladigf vknagrhlcr
      181 pchnrekarg lgkyicqkch aiideqplif kndpyhpdhf ncancgkelt adarelkgel
      241 yclpchdkmg vpicgacrrp iegrvvnamg kqwhvehfvc akcekpflgh rhyerkglay
      301 cethynqlfg dvcfhcnrvi egdvvsalnk awcvhcfacs tcsakltlkd kfveidlkpv
      361 ckhcyekmpe efkrrlakre reakdkdkqk kkkpvcl
//
LOCUS       XP_061011342            3033 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 SUMO-protein ligase RanBP2-like isoform X1 [Dama dama].
ACCESSION   XP_061011342
VERSION     XP_061011342.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155359.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3033
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3033
                     /product="E3 SUMO-protein ligase RanBP2-like isoform X1"
                     /calculated_mol_wt=336662
     Region          <33..222
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Site            order(34..35,37,61,64..65,68..69,71..72,95,98..99,
                     102..103,106)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          59..89
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          461..>530
                     /region_name="CRD_FZ"
                     /note="CRD_domain cysteine-rich domain, also known as Fz
                     (frizzled) domain; cl02447"
                     /db_xref="CDD:470581"
     Region          1182..1298
                     /region_name="RanBD1_RanBP2-like"
                     /note="Ran-binding protein 2, Ran binding domain repeat 1;
                     cd14684"
                     /db_xref="CDD:270203"
     Site            order(1196,1198..1200,1205..1210,1227,1229,1231..1232,
                     1234,1236..1238,1241,1243,1247,1251,1261,1263,1276,1280)
                     /site_type="other"
                     /note="RAN binding site [polypeptide binding]"
                     /db_xref="CDD:270203"
     Region          1347..1377
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          1352..1371
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          1411..1439
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          1415..1434
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          1475..1504
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          1479..1498
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          1539..1562
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          1543..1559
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          1593..1621
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          1597..1616
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          1840..1956
                     /region_name="RanBD2_RanBP2-like"
                     /note="Ran-binding protein 2, Ran binding domain repeat 2;
                     cd13177"
                     /db_xref="CDD:269998"
     Site            order(1854,1856..1858,1863..1868,1885,1887,1889..1890,
                     1892,1894..1896,1899,1901,1905,1909,1919,1921,1934,1938)
                     /site_type="other"
                     /note="putative RAN binding site [polypeptide binding]"
                     /db_xref="CDD:269998"
     Region          2137..2253
                     /region_name="RanBD3_RanBP2-like"
                     /note="Ran-binding protein 2, Ran binding domain repeat 3;
                     cd14685"
                     /db_xref="CDD:270204"
     Site            order(2151,2153..2155,2160..2165,2182,2184,2186..2187,
                     2189,2191..2193,2196,2198,2202,2206,2216,2218,2231,2235)
                     /site_type="other"
                     /note="putative RAN binding site [polypeptide binding]"
                     /db_xref="CDD:270204"
     Region          2445..2507
                     /region_name="IR1-M"
                     /note="Nup358/RanBP2 E3 ligase domain; pfam12185"
                     /db_xref="CDD:463488"
     Region          2523..2582
                     /region_name="IR1-M"
                     /note="Nup358/RanBP2 E3 ligase domain; pfam12185"
                     /db_xref="CDD:463488"
     Region          2734..2850
                     /region_name="RanBD4_RanBP2-like"
                     /note="Ran-binding protein 2, Ran binding domain repeat 4;
                     cd13178"
                     /db_xref="CDD:269999"
     Site            order(2748,2750..2752,2757..2762,2779,2781,2783..2784,
                     2786,2788..2790,2793,2795,2799,2803,2813,2815,2828,2832)
                     /site_type="other"
                     /note="putative RAN binding site [polypeptide binding]"
                     /db_xref="CDD:269999"
     Region          2873..3031
                     /region_name="cyclophilin_ABH_like"
                     /note="Cyclophilin A, B and H-like cyclophilin-type
                     peptidylprolyl cis- trans isomerase (PPIase) domain. This
                     family represents the archetypal cystolic cyclophilin
                     similar to human cyclophilins A, B and H. PPIase is an
                     enzyme which accelerates protein folding...; cd01926"
                     /db_xref="CDD:238907"
     Site            order(2923..2924,2929,2980,2982,2990)
                     /site_type="active"
                     /db_xref="CDD:238907"
     CDS             1..3033
                     /gene="LOC133064859"
                     /coded_by="XM_061155359.1:101..9202"
                     /db_xref="GeneID:133064859"
ORIGIN      
        1 mrrskadver yiasvqgsap spreksmkgf yfaklyyeak eydlakkyis tyinvqerdp
       61 kahrflglly eveeniekav ecykrsveln ptqkdlvlki aellckndvt dgrakywver
      121 aaklfpgspa iyklkeqlld ckgedgwnkl fdliqselya rpddvhvnir lvelyrsnsr
      181 lrdavahchq aerntalrss lewnscvvqt lkeylessqc lesdknnwqt tsqdlliaya
      241 nlmvltlsmr daqesrelle sfdsalqsvk fcaggnedls atflevrghf ymhagslllk
      301 mgqhsdvqwr alselaalcy liafqvprpk tklikgesgq sllemmaydr lsqsghmlln
      361 lsrdkqdflk evvesfanrs gqsalydalf srqlpkdssf lgnddigsid vqepdpdela
      421 rydvgairah ngslqhltwl glqwnslptl pavrkwlkql fhhlpqetsr letnapesic
      481 ildlevfllg viytshlqlk eksnshcsfy qplclplpvc kqlcterqka wwdavcnlih
      541 rkavpgtsak lrllvqrdin tlrgqektgl qpallvhwak clqktgcdlk sfydqreyig
      601 rsvhywkkvl pllkmikkks sipepadplf rhfhsadiqa ceigeyedea hvtfamldvv
      661 ngniddamaa fesinnvvsy wnlallfhrk aedidndvls seeqeeckny lrktrdylik
      721 ilddcdsnls vvkklpvtle svkemlnlvm qeldefsega plhkngslrn adsemkhsts
      781 sptkfspspn rsykyspktp pqwaedqncl lkmiceqvea ikkemqelkl ntsssgsphr
      841 wppenygpdp vpdsyqgsqn fhgapltvat tghsvcysqs payntqyllr paanvtptkg
      901 pvygmnrlpp qqhvygypqq mhtppvqsss acmfsqdmyg pplrfespat gilsprgddy
      961 fnynvqqtst npplpepgyf tkpplaahas rsaepkvlef gktsfvhpvp gegmrpslaa
     1021 pahttqptpf kfnsnfksnd gdftfsspqv vaqapattyn nnesllgllt sdkplqgdgy
     1081 sgpkaaqnmg prntfnfgsk nvpgislten mgtnqpknsg frrsddmftf yspgkslfgv
     1141 patepvskgh dadggsaqgd eeddgphfep vvplpdkiev rtgeedeeef fcnraklyrf
     1201 daasrewker gignvkilrh ktsgkirllm rreqvlkica nhyispdmal apnagsdrsf
     1261 vwyaldyade spkpeqlair fktpeeaalf kckfeeaqsl lkasganvat tthqatrtik
     1321 eptghdskdi dksdgitmnf efqvakkegs wwhcnscslk nmatakkcis cqnlnpgske
     1381 llgpplvetv sapkpsseht pgrsalvtlk keghwdcgvc fvrneptvsq ciecqskkpa
     1441 sksgsplvkq psfkfgqgdl pkaassdfks vfsvkegqwd csvclianeg ssvkceacqt
     1501 prkqsspafa apappslkfg tsetskapks gfegiftkke gqwdcsvqne astaecvacq
     1561 npgqnppasa apapassetg kapksglelf akkegqwdcn vcmirnegss pkcvacgasn
     1621 ptqnpaaevp ltfpvgstae asnscasqtg tgfksnfsek afkfanaeqg fkfghvdqen
     1681 atsfkfqsss ntdsksakeg fsfsvpvsag gfkfgiqete nqktteksfg edtggqaqda
     1741 ggqkdgstvi fgqtgstftf adlaksnsge gfqfgkkdpn fkgfsgagek lfssqsskla
     1801 dkadacadhe kdddaykted sddihfepvv qmpekvelvt geedekvlys qrvklfrfda
     1861 eisqwkergl gnlkilknev ngklrmlmrr eqvlkvcanh witttmhlkp lsgsdrawmw
     1921 lasdfsdgda kleqlaakfk tpelaeefkq kfeecqrlll diplqtphkl vdtgraakli
     1981 qraeemksgl kdfktfltnd qtkvseedsk dsraeaataa dvsgapntet tgptlewdny
     2041 dlredaldds vssssvhasp lasspvrknl frfgesttgf nfsfksalsp skspgklnqs
     2101 gasvgtdeds dvtqeeerdg qhfepvvplp dlvevssgee neqvvfshra klyrydkdag
     2161 qwkergigdi kilqnyenkq vrivmrrdqv lklcanhrit pdmtlqnmkg tervwvwtac
     2221 dfadgerkie hlavrfklqd vadsfkkifd eakvaqekdf litphvarst tprespcgkm
     2281 avavleettr ertdlsqgdd aadttsevgg vsgtpetttk avvsppkfvf gsesvksifs
     2341 sekskpfafg nssatgslfg fsfntplknn sseassaaqs gserkvepgg rqesqnsdlk
     2401 pasdgkvknt spaflkeqfs tshtfktpek veerkkpedl psdddvlivy eltptpeqra
     2461 lasrlqlppt ffcyknrpdy vseeeedded fdtavkklng klylddsetc rlseenltdn
     2521 ekecvivwek kptveekaka dtlklpptff cgvcsdtded ngnvedfqse lqkvqeaqks
     2581 qdkniassad gmctddtkvt vpflckseep efttksvssp svssgtvdkp vdlstrkend
     2641 gdstsqvesk tvafgfgsgt glsfadlass nsgdfafgsk dknfqwantg aavfgsqsts
     2701 kvgeaedgsd eevvhnedih fepivslpev evksgeedee ilfkerakly rwdreasqwk
     2761 ergvgdmkil whtvknyyri lmrrdqvfkv canhvitktm elkplnvsnn alvwtasdya
     2821 dgeakveqla vrfktkemad cfkkkfeecq qnllkpqkgq lsltaefske tnpvvffdic
     2881 addeplgrit melfsnivpk taenfralct gekgfgfkss ifhrvipdfv cqggditkhd
     2941 gtggrsiygd kfedenfdvk htgpgllsma srgqnannsq ffiilkkaeh ldfkhvvfgf
     3001 vkdgmdtvkk iesfgspqgs vsrriiitec gqi
//
LOCUS       XP_061011343            3032 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 SUMO-protein ligase RanBP2-like isoform X2 [Dama dama].
ACCESSION   XP_061011343
VERSION     XP_061011343.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155360.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3032
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3032
                     /product="E3 SUMO-protein ligase RanBP2-like isoform X2"
                     /calculated_mol_wt=336534
     Region          <32..221
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Site            order(33..34,36,60,63..64,67..68,70..71,94,97..98,
                     101..102,105)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          58..88
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          460..>529
                     /region_name="CRD_FZ"
                     /note="CRD_domain cysteine-rich domain, also known as Fz
                     (frizzled) domain; cl02447"
                     /db_xref="CDD:470581"
     Region          1181..1297
                     /region_name="RanBD1_RanBP2-like"
                     /note="Ran-binding protein 2, Ran binding domain repeat 1;
                     cd14684"
                     /db_xref="CDD:270203"
     Site            order(1195,1197..1199,1204..1209,1226,1228,1230..1231,
                     1233,1235..1237,1240,1242,1246,1250,1260,1262,1275,1279)
                     /site_type="other"
                     /note="RAN binding site [polypeptide binding]"
                     /db_xref="CDD:270203"
     Region          1346..1376
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          1351..1370
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          1410..1438
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          1414..1433
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          1474..1503
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          1478..1497
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          1538..1561
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          1542..1558
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          1592..1620
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          1596..1615
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          1839..1955
                     /region_name="RanBD2_RanBP2-like"
                     /note="Ran-binding protein 2, Ran binding domain repeat 2;
                     cd13177"
                     /db_xref="CDD:269998"
     Site            order(1853,1855..1857,1862..1867,1884,1886,1888..1889,
                     1891,1893..1895,1898,1900,1904,1908,1918,1920,1933,1937)
                     /site_type="other"
                     /note="putative RAN binding site [polypeptide binding]"
                     /db_xref="CDD:269998"
     Region          2136..2252
                     /region_name="RanBD3_RanBP2-like"
                     /note="Ran-binding protein 2, Ran binding domain repeat 3;
                     cd14685"
                     /db_xref="CDD:270204"
     Site            order(2150,2152..2154,2159..2164,2181,2183,2185..2186,
                     2188,2190..2192,2195,2197,2201,2205,2215,2217,2230,2234)
                     /site_type="other"
                     /note="putative RAN binding site [polypeptide binding]"
                     /db_xref="CDD:270204"
     Region          2444..2506
                     /region_name="IR1-M"
                     /note="Nup358/RanBP2 E3 ligase domain; pfam12185"
                     /db_xref="CDD:463488"
     Region          2522..2581
                     /region_name="IR1-M"
                     /note="Nup358/RanBP2 E3 ligase domain; pfam12185"
                     /db_xref="CDD:463488"
     Region          2733..2849
                     /region_name="RanBD4_RanBP2-like"
                     /note="Ran-binding protein 2, Ran binding domain repeat 4;
                     cd13178"
                     /db_xref="CDD:269999"
     Site            order(2747,2749..2751,2756..2761,2778,2780,2782..2783,
                     2785,2787..2789,2792,2794,2798,2802,2812,2814,2827,2831)
                     /site_type="other"
                     /note="putative RAN binding site [polypeptide binding]"
                     /db_xref="CDD:269999"
     Region          2872..3030
                     /region_name="cyclophilin_ABH_like"
                     /note="Cyclophilin A, B and H-like cyclophilin-type
                     peptidylprolyl cis- trans isomerase (PPIase) domain. This
                     family represents the archetypal cystolic cyclophilin
                     similar to human cyclophilins A, B and H. PPIase is an
                     enzyme which accelerates protein folding...; cd01926"
                     /db_xref="CDD:238907"
     Site            order(2922..2923,2928,2979,2981,2989)
                     /site_type="active"
                     /db_xref="CDD:238907"
     CDS             1..3032
                     /gene="LOC133064859"
                     /coded_by="XM_061155360.1:101..9199"
                     /db_xref="GeneID:133064859"
ORIGIN      
        1 mrrskadver yiasvqgsap spresmkgfy faklyyeake ydlakkyist yinvqerdpk
       61 ahrflgllye veeniekave cykrsvelnp tqkdlvlkia ellckndvtd grakywvera
      121 aklfpgspai yklkeqlldc kgedgwnklf dliqselyar pddvhvnirl velyrsnsrl
      181 rdavahchqa erntalrssl ewnscvvqtl keylessqcl esdknnwqtt sqdlliayan
      241 lmvltlsmrd aqesrelles fdsalqsvkf caggnedlsa tflevrghfy mhagslllkm
      301 gqhsdvqwra lselaalcyl iafqvprpkt klikgesgqs llemmaydrl sqsghmllnl
      361 srdkqdflke vvesfanrsg qsalydalfs rqlpkdssfl gnddigsidv qepdpdelar
      421 ydvgairahn gslqhltwlg lqwnslptlp avrkwlkqlf hhlpqetsrl etnapesici
      481 ldlevfllgv iytshlqlke ksnshcsfyq plclplpvck qlcterqkaw wdavcnlihr
      541 kavpgtsakl rllvqrdint lrgqektglq pallvhwakc lqktgcdlks fydqreyigr
      601 svhywkkvlp llkmikkkss ipepadplfr hfhsadiqac eigeyedeah vtfamldvvn
      661 gniddamaaf esinnvvsyw nlallfhrka edidndvlss eeqeecknyl rktrdyliki
      721 lddcdsnlsv vkklpvtles vkemlnlvmq eldefsegap lhkngslrna dsemkhstss
      781 ptkfspspnr sykyspktpp qwaedqncll kmiceqveai kkemqelkln tsssgsphrw
      841 ppenygpdpv pdsyqgsqnf hgapltvatt ghsvcysqsp ayntqyllrp aanvtptkgp
      901 vygmnrlppq qhvygypqqm htppvqsssa cmfsqdmygp plrfespatg ilsprgddyf
      961 nynvqqtstn pplpepgyft kpplaahasr saepkvlefg ktsfvhpvpg egmrpslaap
     1021 ahttqptpfk fnsnfksndg dftfsspqvv aqapattynn nesllgllts dkplqgdgys
     1081 gpkaaqnmgp rntfnfgskn vpgisltenm gtnqpknsgf rrsddmftfy spgkslfgvp
     1141 atepvskghd adggsaqgde eddgphfepv vplpdkievr tgeedeeeff cnraklyrfd
     1201 aasrewkerg ignvkilrhk tsgkirllmr reqvlkican hyispdmala pnagsdrsfv
     1261 wyaldyades pkpeqlairf ktpeeaalfk ckfeeaqsll kasganvatt thqatrtike
     1321 ptghdskdid ksdgitmnfe fqvakkegsw whcnscslkn matakkcisc qnlnpgskel
     1381 lgpplvetvs apkpssehtp grsalvtlkk eghwdcgvcf vrneptvsqc iecqskkpas
     1441 ksgsplvkqp sfkfgqgdlp kaassdfksv fsvkegqwdc svclianegs svkceacqtp
     1501 rkqsspafaa pappslkfgt setskapksg fegiftkkeg qwdcsvqnea staecvacqn
     1561 pgqnppasaa papassetgk apksglelfa kkegqwdcnv cmirnegssp kcvacgasnp
     1621 tqnpaaevpl tfpvgstaea snscasqtgt gfksnfseka fkfanaeqgf kfghvdqena
     1681 tsfkfqsssn tdsksakegf sfsvpvsagg fkfgiqeten qktteksfge dtggqaqdag
     1741 gqkdgstvif gqtgstftfa dlaksnsgeg fqfgkkdpnf kgfsgagekl fssqssklad
     1801 kadacadhek dddaykteds ddihfepvvq mpekvelvtg eedekvlysq rvklfrfdae
     1861 isqwkerglg nlkilknevn gklrmlmrre qvlkvcanhw itttmhlkpl sgsdrawmwl
     1921 asdfsdgdak leqlaakfkt pelaeefkqk feecqrllld iplqtphklv dtgraakliq
     1981 raeemksglk dfktfltndq tkvseedskd sraeaataad vsgapntett gptlewdnyd
     2041 lredalddsv ssssvhaspl asspvrknlf rfgesttgfn fsfksalsps kspgklnqsg
     2101 asvgtdedsd vtqeeerdgq hfepvvplpd lvevssgeen eqvvfshrak lyrydkdagq
     2161 wkergigdik ilqnyenkqv rivmrrdqvl klcanhritp dmtlqnmkgt ervwvwtacd
     2221 fadgerkieh lavrfklqdv adsfkkifde akvaqekdfl itphvarstt prespcgkma
     2281 vavleettre rtdlsqgdda adttsevggv sgtpetttka vvsppkfvfg sesvksifss
     2341 ekskpfafgn ssatgslfgf sfntplknns seassaaqsg serkvepggr qesqnsdlkp
     2401 asdgkvknts paflkeqfst shtfktpekv eerkkpedlp sdddvlivye ltptpeqral
     2461 asrlqlpptf fcyknrpdyv seeeeddedf dtavkklngk lylddsetcr lseenltdne
     2521 kecvivwekk ptveekakad tlklpptffc gvcsdtdedn gnvedfqsel qkvqeaqksq
     2581 dkniassadg mctddtkvtv pflckseepe fttksvssps vssgtvdkpv dlstrkendg
     2641 dstsqveskt vafgfgsgtg lsfadlassn sgdfafgskd knfqwantga avfgsqstsk
     2701 vgeaedgsde evvhnedihf epivslpeve vksgeedeei lfkeraklyr wdreasqwke
     2761 rgvgdmkilw htvknyyril mrrdqvfkvc anhvitktme lkplnvsnna lvwtasdyad
     2821 geakveqlav rfktkemadc fkkkfeecqq nllkpqkgql sltaefsket npvvffdica
     2881 ddeplgritm elfsnivpkt aenfralctg ekgfgfkssi fhrvipdfvc qggditkhdg
     2941 tggrsiygdk fedenfdvkh tgpgllsmas rgqnannsqf fiilkkaehl dfkhvvfgfv
     3001 kdgmdtvkki esfgspqgsv srriiitecg qi
//
LOCUS       XP_061011344             666 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 138 isoform X1 [Dama dama].
ACCESSION   XP_061011344
VERSION     XP_061011344.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155361.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..666
                     /product="coiled-coil domain-containing protein 138
                     isoform X1"
                     /calculated_mol_wt=75862
     Region          174..>314
                     /region_name="DR0291"
                     /note="Predicted nucleic acid-binding protein DR0291,
                     contains C4-type Zn-ribbon domain [General function
                     prediction only]; COG1579"
                     /db_xref="CDD:441187"
     CDS             1..666
                     /gene="CCDC138"
                     /coded_by="XM_061155361.1:1..2001"
                     /db_xref="GeneID:133064862"
ORIGIN      
        1 meprvvkppg qdlvverlks ryglrggclg epgrrrpdva errrrpprtp edldifscgd
       61 kvgptlrcfs derrrrpasp rgvltvnwqd deldsfqdlk epeteeeftg ndsrvsaski
      121 nqqsfretdk adawpanvas rsrswadycs dgsdsppkhv gspasrvprk pgllprqvsk
      181 iydellqihq klqcetaaqq efaeelqkre rflvereell frhegalsev kdvreevlmr
      241 fqimkeqhda evghltevlk ernkeskrlr ssfdalkgln dslkkqlnev seenrklevq
      301 akrvqarldn lqrkyefmti qrlkgnpqat heakslkqek vpaskpckvs lngqvyellt
      361 vfmdwisdqh lsklkneesg mdgekplpif asqrtdiqek cvkllplmte qlqwlpfvna
      421 rlhepyvrfi ywslrqldag tqhstmtttl rrlgedifrg vvtkgvqdaa lehsvesrpr
      481 taaffkstsl plrfvstliv lktvtqadfl aqafdslcld lqadegkslf lqlqavpvvl
      541 shlklssrgl lpsvmdsllq mtvessalqp fleacscslf frtcsvllra pkldihvlek
      601 lsiilqklsk iksnkklfel ftihlmlqei qrtthpehaf lcinlnstlf nlgltkcnsl
      661 aastnp
//
LOCUS       XP_061011345             597 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 138 isoform X2 [Dama dama].
ACCESSION   XP_061011345
VERSION     XP_061011345.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155362.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..597
                     /product="coiled-coil domain-containing protein 138
                     isoform X2"
                     /calculated_mol_wt=67341
     Region          174..>314
                     /region_name="DR0291"
                     /note="Predicted nucleic acid-binding protein DR0291,
                     contains C4-type Zn-ribbon domain [General function
                     prediction only]; COG1579"
                     /db_xref="CDD:441187"
     CDS             1..597
                     /gene="CCDC138"
                     /coded_by="XM_061155362.1:1..1794"
                     /db_xref="GeneID:133064862"
ORIGIN      
        1 meprvvkppg qdlvverlks ryglrggclg epgrrrpdva errrrpprtp edldifscgd
       61 kvgptlrcfs derrrrpasp rgvltvnwqd deldsfqdlk epeteeeftg ndsrvsaski
      121 nqqsfretdk adawpanvas rsrswadycs dgsdsppkhv gspasrvprk pgllprqvsk
      181 iydellqihq klqcetaaqq efaeelqkre rflvereell frhegalsev kdvreevlmr
      241 fqimkeqhda evghltevlk ernkeskrlr ssfdalkgln dslkkqlnev seenrklevq
      301 akrvqarldn lqrkyefmti qrlkgnpqat heakslkqek vpaskpckvs lngqvyellt
      361 vfmdwisdqh lsklkneesg mdgekplpif asqrtdiqek cvkllplmte qlqwlpfvna
      421 rlhepyvrfi ywslrqldag tqhstmtttl rrlgedifrg vvtkgvqdaa lehsvesrpr
      481 taaffkstsl plrfvstliv lktvtqggrg eepvpaaags asgaeppeav qpgaaaqrdg
      541 qpaaddrgiq cpaalsgglq llallpdllr aapgpearhp rpreaqyhpa etfqnqe
//
LOCUS       XP_061011346             446 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 138 isoform X3 [Dama dama].
ACCESSION   XP_061011346
VERSION     XP_061011346.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155363.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..446
                     /product="coiled-coil domain-containing protein 138
                     isoform X3"
                     /calculated_mol_wt=50908
     Region          174..>314
                     /region_name="DR0291"
                     /note="Predicted nucleic acid-binding protein DR0291,
                     contains C4-type Zn-ribbon domain [General function
                     prediction only]; COG1579"
                     /db_xref="CDD:441187"
     CDS             1..446
                     /gene="CCDC138"
                     /coded_by="XM_061155363.1:1..1341"
                     /db_xref="GeneID:133064862"
ORIGIN      
        1 meprvvkppg qdlvverlks ryglrggclg epgrrrpdva errrrpprtp edldifscgd
       61 kvgptlrcfs derrrrpasp rgvltvnwqd deldsfqdlk epeteeeftg ndsrvsaski
      121 nqqsfretdk adawpanvas rsrswadycs dgsdsppkhv gspasrvprk pgllprqvsk
      181 iydellqihq klqcetaaqq efaeelqkre rflvereell frhegalsev kdvreevlmr
      241 fqimkeqhda evghltevlk ernkeskrlr ssfdalkgln dslkkqlnev seenrklevq
      301 akrvqarldn lqrkyefmti qrlkgnpqat heakslkqek vpaskpckvs lngqvyellt
      361 vfmdwisdqh lsklkneesg mdgekplpif asqrtdiqek cvkscqilcd sldcsplgss
      421 iqgifqartl ewvaiscsrg tsqprn
//
LOCUS       XP_061011347             443 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 138 isoform X4 [Dama dama].
ACCESSION   XP_061011347
VERSION     XP_061011347.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155364.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..443
                     /product="coiled-coil domain-containing protein 138
                     isoform X4"
                     /calculated_mol_wt=50589
     Region          174..>314
                     /region_name="DR0291"
                     /note="Predicted nucleic acid-binding protein DR0291,
                     contains C4-type Zn-ribbon domain [General function
                     prediction only]; COG1579"
                     /db_xref="CDD:441187"
     CDS             1..443
                     /gene="CCDC138"
                     /coded_by="XM_061155364.1:1..1332"
                     /db_xref="GeneID:133064862"
ORIGIN      
        1 meprvvkppg qdlvverlks ryglrggclg epgrrrpdva errrrpprtp edldifscgd
       61 kvgptlrcfs derrrrpasp rgvltvnwqd deldsfqdlk epeteeeftg ndsrvsaski
      121 nqqsfretdk adawpanvas rsrswadycs dgsdsppkhv gspasrvprk pgllprqvsk
      181 iydellqihq klqcetaaqq efaeelqkre rflvereell frhegalsev kdvreevlmr
      241 fqimkeqhda evghltevlk ernkeskrlr ssfdalkgln dslkkqlnev seenrklevq
      301 akrvqarldn lqrkyefmti qrlkgnpqat heakslkqek vpaskpckvs lngqvyellt
      361 vfmdwisdqh lsklkneesg mdgekplpif asqrtdiqek cvkilcdsld csplgssiqg
      421 ifqartlewv aiscsrgtsq prn
//
LOCUS       XP_061011348             349 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 138 isoform X5 [Dama dama].
ACCESSION   XP_061011348
VERSION     XP_061011348.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155365.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..349
                     /product="coiled-coil domain-containing protein 138
                     isoform X5"
                     /calculated_mol_wt=39162
     CDS             1..349
                     /gene="CCDC138"
                     /coded_by="XM_061155365.1:300..1349"
                     /db_xref="GeneID:133064862"
ORIGIN      
        1 mtiqrlkgnp qatheakslk qekvpaskpc kvslngqvye lltvfmdwis dqhlsklkne
       61 esgmdgekpl pifasqrtdi qekcvkllpl mteqlqwlpf vnarlhepyv rfiywslrql
      121 dagtqhstmt ttlrrlgedi frgvvtkgvq daalehsves rprtaaffks tslplrfvst
      181 livlktvtqa dflaqafdsl cldlqadegk slflqlqavp vvlshlklss rgllpsvmds
      241 llqmtvessa lqpfleacsc slffrtcsvl lrapkldihv leklsiilqk lskiksnkkl
      301 felftihlml qeiqrtthpe haflcinlns tlfnlgltkc nslaastnp
//
LOCUS       XP_061011349             844 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase SH3RF3 isoform X1 [Dama dama].
ACCESSION   XP_061011349
VERSION     XP_061011349.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155366.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..844
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..844
                     /product="E3 ubiquitin-protein ligase SH3RF3 isoform X1"
                     /calculated_mol_wt=87869
     Region          37..82
                     /region_name="RING-HC_SH3RF3"
                     /note="RING finger, HC subclass, found in SH3
                     domain-containing RING finger protein 3 (SH3RF3) and
                     similar proteins; cd16750"
                     /db_xref="CDD:438408"
     Region          185..225
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
     Site            order(186,188,191,195,213..214,220,222..223)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212861"
     Region          236..290
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
     Site            order(241,243,246,254,272..273,286,288..289)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212864"
     Region          433..489
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
     Site            order(439,441,444,448,466..467,482,484..485)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212858"
     Region          <495..745
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          789..843
                     /region_name="SH3_SH3RF_C"
                     /note="C-terminal (Fourth) Src Homology 3 domain of SH3
                     domain containing ring finger 1 (SH3RF1), SH3RF3, and
                     similar domains; cd11785"
                     /db_xref="CDD:212719"
     Site            order(794,796,799,803,821..822,837,839..840)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212719"
     CDS             1..844
                     /gene="SH3RF3"
                     /coded_by="XM_061155366.1:348..2882"
                     /db_xref="GeneID:133064863"
ORIGIN      
        1 mllgaprlca sraaaaaqre ddgdrlggdm desslldlle csvclerldt takvlpcqht
       61 fcrrclesiv ssrrelrcpe crilvgcgvd elpanillvr lldgirqrpr agaspgsspp
      121 arpgpgpspa pgaasalagg ggsspgspvl lpaatgatss lrelatsrst ppakgppppp
      181 agkallnleg tepgelrcge gdavvlqrrg delwyhgllp agfvqsvrpl ppappqgkal
      241 ydfemkdrdq dkdclsfskd evltvirrvd dnwaegklrd kigifpllyv elndaakqlm
      301 emdklglasa sgclaslpsn agavasvapg ptsgstgavs afqrrvdskk nakkrhsfta
      361 lsvthkstqa sghrrsmeis apvlisssdp raaarigdlv hlsrsapaqd ssagstpate
      421 qqsiaprvql plnvylalya ykpqksdele lrkgdtyrvl ekcrdgwfkg talrtglsgv
      481 fpgnyvtpvs ripvggagpp rnnavggspl akgmattmhp gggslsspat alrpalpltt
      541 aqvpaqhqaa spplgsclrh tvqpaasqar sagppaahpa qiqgrptatv splrsqnsps
      601 rlpaglrppa lgspqhspqp vtqcprpaip lasaasavtp pnvsaanlng eagggtaggl
      661 tassptsggg rpderknekk drksgllkll agastrrksr sppstspthd pqavdaslqg
      721 avgpevslls ihgragscpi egemqgalgm eplhrkagsl dlsfpsptqp aafstiavrp
      781 epkplprery rvvvsyppqs eaeielkegd vvfvhkkred gwykgtlqrn grtglfpgsf
      841 vesf
//
LOCUS       XP_061011350             797 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase SH3RF3 isoform X2 [Dama dama].
ACCESSION   XP_061011350
VERSION     XP_061011350.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155367.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..797
                     /product="E3 ubiquitin-protein ligase SH3RF3 isoform X2"
                     /calculated_mol_wt=82346
     Region          37..82
                     /region_name="RING-HC_SH3RF3"
                     /note="RING finger, HC subclass, found in SH3
                     domain-containing RING finger protein 3 (SH3RF3) and
                     similar proteins; cd16750"
                     /db_xref="CDD:438408"
     Region          185..225
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
     Site            order(186,188,191,195,213..214,220,222..223)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212861"
     Region          236..290
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
     Site            order(241,243,246,254,272..273,286,288..289)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212864"
     Region          433..489
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
     Site            order(439,441,444,448,466..467,482,484..485)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212858"
     Region          <513..745
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..797
                     /gene="SH3RF3"
                     /coded_by="XM_061155367.1:348..2741"
                     /db_xref="GeneID:133064863"
ORIGIN      
        1 mllgaprlca sraaaaaqre ddgdrlggdm desslldlle csvclerldt takvlpcqht
       61 fcrrclesiv ssrrelrcpe crilvgcgvd elpanillvr lldgirqrpr agaspgsspp
      121 arpgpgpspa pgaasalagg ggsspgspvl lpaatgatss lrelatsrst ppakgppppp
      181 agkallnleg tepgelrcge gdavvlqrrg delwyhgllp agfvqsvrpl ppappqgkal
      241 ydfemkdrdq dkdclsfskd evltvirrvd dnwaegklrd kigifpllyv elndaakqlm
      301 emdklglasa sgclaslpsn agavasvapg ptsgstgavs afqrrvdskk nakkrhsfta
      361 lsvthkstqa sghrrsmeis apvlisssdp raaarigdlv hlsrsapaqd ssagstpate
      421 qqsiaprvql plnvylalya ykpqksdele lrkgdtyrvl ekcrdgwfkg talrtglsgv
      481 fpgnyvtpvs ripvggagpp rnnavggspl akgmattmhp gggslsspat alrpalpltt
      541 aqvpaqhqaa spplgsclrh tvqpaasqar sagppaahpa qiqgrptatv splrsqnsps
      601 rlpaglrppa lgspqhspqp vtqcprpaip lasaasavtp pnvsaanlng eagggtaggl
      661 tassptsggg rpderknekk drksgllkll agastrrksr sppstspthd pqavdaslqg
      721 avgpevslls ihgragscpi egemqgalgm eplhrkagsl dlsfpsptqp aafstiavrp
      781 epkplprese hqgqgqp
//
LOCUS       XP_061011351             482 aa            linear   MAM 02-DEC-2023
DEFINITION  septin-10 isoform X1 [Dama dama].
ACCESSION   XP_061011351
VERSION     XP_061011351.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155368.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..482
                     /product="septin-10 isoform X1"
                     /calculated_mol_wt=55584
     Region          62..330
                     /region_name="CDC_Septin"
                     /note="CDC/Septin GTPase family; cd01850"
                     /db_xref="CDD:206649"
     Site            72..79
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206649"
     Site            order(74..80,124,127,207..208,210,262..263)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206649"
     Site            99..107
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206649"
     Site            101
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206649"
     Site            124..127
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206649"
     Site            order(126..163,165..173)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206649"
     Site            207..210
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206649"
     Site            262..264
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206649"
     CDS             1..482
                     /gene="SEPTIN10"
                     /coded_by="XM_061155368.1:81..1529"
                     /db_xref="GeneID:133064864"
ORIGIN      
        1 masevarhll fqshiatkta htssqvsdhe qkqkegprsl tmsghvgfes lpdqlvnrsi
       61 qqgfcfnilc vgetgigkst lidtlfntnf edhesshfyp hvrlkaqtye lqesnvrlkl
      121 tivntvgfgd qinkeesyqp ivdyidaqfe aylqeelkik rslfnyhdsr vhvclyfisp
      181 tghslktldl ltmksldskv niipviakad aisktelqkf kiklmselvs ngvqiyhfpt
      241 ddetiakina smnghlpfav vgsmdevkvg nkmvkarqyp wgvvqvenen hcdfvklrem
      301 lictnmedlr dqthtrhyel yrrrkleemg fmdvgpenqp lslqetyeak rhefygerqr
      361 keeemkqlfv qrvkekeail keaerelqak fehlkrvhqe eklrleekrr lleeeiiafs
      421 kkkatseiyq nqtfmtpgsn lrkdkdrkki snaqpleggs rragespqag nlasrarpvl
      481 qr
//
LOCUS       XP_061011352             453 aa            linear   MAM 02-DEC-2023
DEFINITION  septin-10 isoform X2 [Dama dama].
ACCESSION   XP_061011352
VERSION     XP_061011352.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155369.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..453
                     /product="septin-10 isoform X2"
                     /calculated_mol_wt=52623
     Region          62..330
                     /region_name="CDC_Septin"
                     /note="CDC/Septin GTPase family; cd01850"
                     /db_xref="CDD:206649"
     Site            72..79
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206649"
     Site            order(74..80,124,127,207..208,210,262..263)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206649"
     Site            99..107
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206649"
     Site            101
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206649"
     Site            124..127
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206649"
     Site            order(126..163,165..173)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206649"
     Site            207..210
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206649"
     Site            262..264
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206649"
     CDS             1..453
                     /gene="SEPTIN10"
                     /coded_by="XM_061155369.1:81..1442"
                     /db_xref="GeneID:133064864"
ORIGIN      
        1 masevarhll fqshiatkta htssqvsdhe qkqkegprsl tmsghvgfes lpdqlvnrsi
       61 qqgfcfnilc vgetgigkst lidtlfntnf edhesshfyp hvrlkaqtye lqesnvrlkl
      121 tivntvgfgd qinkeesyqp ivdyidaqfe aylqeelkik rslfnyhdsr vhvclyfisp
      181 tghslktldl ltmksldskv niipviakad aisktelqkf kiklmselvs ngvqiyhfpt
      241 ddetiakina smnghlpfav vgsmdevkvg nkmvkarqyp wgvvqvenen hcdfvklrem
      301 lictnmedlr dqthtrhyel yrrrkleemg fmdvgpenqp lslqetyeak rhefygerqr
      361 keeemkqlfv qrvkekeail keaerelqak fehlkrvhqe eklrleekrr lleeeiiafs
      421 kkkatseiyq nqtfmtpgsn lrkdkdrkns nfm
//
LOCUS       XP_061011353             441 aa            linear   MAM 02-DEC-2023
DEFINITION  septin-10 isoform X3 [Dama dama].
ACCESSION   XP_061011353
VERSION     XP_061011353.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155370.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..441
                     /product="septin-10 isoform X3"
                     /calculated_mol_wt=51029
     Region          21..289
                     /region_name="CDC_Septin"
                     /note="CDC/Septin GTPase family; cd01850"
                     /db_xref="CDD:206649"
     Site            31..38
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206649"
     Site            order(33..39,83,86,166..167,169,221..222)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206649"
     Site            58..66
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206649"
     Site            60
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206649"
     Site            83..86
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206649"
     Site            order(85..122,124..132)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206649"
     Site            166..169
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206649"
     Site            221..223
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206649"
     CDS             1..441
                     /gene="SEPTIN10"
                     /coded_by="XM_061155370.1:464..1789"
                     /db_xref="GeneID:133064864"
ORIGIN      
        1 msghvgfesl pdqlvnrsiq qgfcfnilcv getgigkstl idtlfntnfe dhesshfyph
       61 vrlkaqtyel qesnvrlklt ivntvgfgdq inkeesyqpi vdyidaqfea ylqeelkikr
      121 slfnyhdsrv hvclyfispt ghslktldll tmksldskvn iipviakada isktelqkfk
      181 iklmselvsn gvqiyhfptd detiakinas mnghlpfavv gsmdevkvgn kmvkarqypw
      241 gvvqvenenh cdfvklreml ictnmedlrd qthtrhyely rrrkleemgf mdvgpenqpl
      301 slqetyeakr hefygerqrk eeemkqlfvq rvkekeailk eaerelqakf ehlkrvhqee
      361 klrleekrrl leeeiiafsk kkatseiyqn qtfmtpgsnl rkdkdrkkis naqpleggsr
      421 ragespqagn lasrarpvlq r
//
LOCUS       XP_061011354             292 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein bL19m [Dama dama].
ACCESSION   XP_061011354
VERSION     XP_061011354.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155371.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..292
                     /product="large ribosomal subunit protein bL19m"
                     /calculated_mol_wt=33266
     Region          108..192
                     /region_name="Ribosomal_L19"
                     /note="Ribosomal protein L19; pfam01245"
                     /db_xref="CDD:460130"
     CDS             1..292
                     /gene="MRPL19"
                     /coded_by="XM_061155371.1:25..903"
                     /db_xref="GeneID:133064866"
ORIGIN      
        1 maasiargyq aakglgpsfr strallpvst svasrvlagp grrqitgpse pgvfqpppkp
       61 vivdkrspqr resrflspef ipprgrtnpl kfqierkdml errkilhipe fyvgsilrvt
      121 tadpyangkt sqflgiciqr sgtglgatfi lrntiegqgv eicfelynpr iqeiqvvkle
      181 krlddsllyl rdalpeystf dmnmkpvaqe psqevpinql kvkmkpkpws krwerpkfnv
      241 kgirfdlclt eeqmkeaqkw sqpwlefdmm reydtskiea aiwneieask ns
//
LOCUS       XP_061011355             801 aa            linear   MAM 02-DEC-2023
DEFINITION  intron Large complex component GCFC2 isoform X1 [Dama dama].
ACCESSION   XP_061011355
VERSION     XP_061011355.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155372.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..801
                     /product="intron Large complex component GCFC2 isoform X1"
                     /calculated_mol_wt=92236
     Region          486..701
                     /region_name="GCFC"
                     /note="GC-rich sequence DNA-binding factor-like protein;
                     pfam07842"
                     /db_xref="CDD:400273"
     CDS             1..801
                     /gene="GCFC2"
                     /coded_by="XM_061155372.1:49..2454"
                     /db_xref="GeneID:133064868"
ORIGIN      
        1 mahrpkrtfr phradssdsd gaqetfaepg etgeqeargp avkgppsgrg haevaellrr
       61 grgrrrgraw assrraataa prldgssdvp esrmvdlsad kedgahhsse skddqssspn
      121 ssrtledefs sldyfhiigy ckilhkfpvl yidipdaafi qatygkckla raqedyisld
      181 vkhaftnsgm kknsedsese pddfkdimpf tpkpqtlrqr maeetktrne etsddsqdek
      241 nqdiweqqqm rkavkitkgq didlsygres qtvkkfdasi sfppvsleii kkqlntrltl
      301 lqdthrshlr eyekyiqdik sskstiqnle nssnqalsfk fyksmkvyve nlidclneki
      361 iniqeiesam halllkqami fmkrrqdelk hesaylqqls ctpetsvnns laidektqwi
      421 leevesrrar rrqarvlsgn ctheegtssd delssadmid fqkshgdllq dhkkifedvh
      481 sdfcniqnil lkfqqwrekf pdsyyeafis lcipkllnpl irfqlidwnp lkfdsiglkq
      541 mpwfksikef idcsmedskk edssdkkils tvinktvipr ltgfvefiwd plsttqttsl
      601 imqcrmilee hstcenevnk gkqdllksiv srmkkaiedd vfiplypksa venrtsphsk
      661 fqerqfwsgl klfgnillwn ellpedilqe lglekllnry liiallnaip dpdvvkkcsq
      721 iaaylpekwf qnsamrtsip qlenfiqfll qsarklsrne irdevkeiil ilvkikalnq
      781 aesfieeyhl dhlrsvikef e
//
LOCUS       XP_061011356             675 aa            linear   MAM 02-DEC-2023
DEFINITION  intron Large complex component GCFC2 isoform X2 [Dama dama].
ACCESSION   XP_061011356
VERSION     XP_061011356.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155373.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..675
                     /product="intron Large complex component GCFC2 isoform X2"
                     /calculated_mol_wt=77574
     Region          486..663
                     /region_name="GCFC"
                     /note="GC-rich sequence DNA-binding factor-like protein;
                     pfam07842"
                     /db_xref="CDD:400273"
     CDS             1..675
                     /gene="GCFC2"
                     /coded_by="XM_061155373.1:49..2076"
                     /db_xref="GeneID:133064868"
ORIGIN      
        1 mahrpkrtfr phradssdsd gaqetfaepg etgeqeargp avkgppsgrg haevaellrr
       61 grgrrrgraw assrraataa prldgssdvp esrmvdlsad kedgahhsse skddqssspn
      121 ssrtledefs sldyfhiigy ckilhkfpvl yidipdaafi qatygkckla raqedyisld
      181 vkhaftnsgm kknsedsese pddfkdimpf tpkpqtlrqr maeetktrne etsddsqdek
      241 nqdiweqqqm rkavkitkgq didlsygres qtvkkfdasi sfppvsleii kkqlntrltl
      301 lqdthrshlr eyekyiqdik sskstiqnle nssnqalsfk fyksmkvyve nlidclneki
      361 iniqeiesam halllkqami fmkrrqdelk hesaylqqls ctpetsvnns laidektqwi
      421 leevesrrar rrqarvlsgn ctheegtssd delssadmid fqkshgdllq dhkkifedvh
      481 sdfcniqnil lkfqqwrekf pdsyyeafis lcipkllnpl irfqlidwnp lkfdsiglkq
      541 mpwfksikef idcsmedskk edssdkkils tvinktvipr ltgfvefiwd plsttqttsl
      601 imqcrmilee hstcenevnk gkqdllksiv srmkkaiedd vfiplypksa venrtsphsk
      661 fqerqfwsgl kvtyw
//
LOCUS       XP_061011357             717 aa            linear   MAM 02-DEC-2023
DEFINITION  SANT and BTB domain regulator of class switch recombination isoform
            X1 [Dama dama].
ACCESSION   XP_061011357
VERSION     XP_061011357.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155374.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..717
                     /product="SANT and BTB domain regulator of class switch
                     recombination isoform X1"
                     /calculated_mol_wt=81678
     Region          21..61
                     /region_name="SANT"
                     /note="SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding
                     domains; smart00717"
                     /db_xref="CDD:197842"
     Site            order(46..47,49..50,52..54,56..58)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238096"
     Region          147..248
                     /region_name="SANBR_BTB"
                     /note="SANT and BTB domain regulator of CSR, BTB domain;
                     pfam11822"
                     /db_xref="CDD:432102"
     CDS             1..717
                     /gene="SANBR"
                     /coded_by="XM_061155374.1:106..2259"
                     /db_xref="GeneID:133064870"
ORIGIN      
        1 msrgysennn flnnnnqmvl dmilypligi hqtinwetva rlvpgltpke cakrfdelks
       61 sgsspvdnqy splmaagesp vetlatyiks slldtqgefq etpvgqdtvs ktgrhsiast
      121 rncssesenc tthnggekte esegpnmvih vcdeaknlke dficprdlli semkyfaeyl
      181 svdaqrweev disvhcdvhi fnwlikyvkr ntkenkdcem pslepgnvis ilisseflkm
      241 dslveqciqy chknmnaiva tpcnmncina nlltriadlf thnevddlkd kkdkfrsklf
      301 ckkierlfdp eylnpdsrnn aatlyrcclc kklltketer ripcipgkin vdqhgniiyi
      361 hirdktwdvh eylnslfeel kswrdvywrl wgtvnwltcs rcyqtflcie fshcqyhset
      421 viyptagssl stvgtgiypc cnqkvlrfdp tqltkgckvk dhmvtlrdqg egedllscpt
      481 akilddlhkh kdvilvpfak dtisdsggpc dekgldcdil lepntpwgpk sgelnaflsl
      541 knwtlqlkqq slfseeeeyt tgsevtedev gdeeevskkq rkkekpkkft kqpkkqmssp
      601 cgqkkekale kstsrdvspf ivsmqknkwd atrslrfnqd aqreddqrrm seitghlikm
      661 rlgdldrvrs keakefaggi ysrleaqika svpvsarqss sekntrsksr fgqgrpa
//
LOCUS       XP_061011358             717 aa            linear   MAM 02-DEC-2023
DEFINITION  SANT and BTB domain regulator of class switch recombination isoform
            X1 [Dama dama].
ACCESSION   XP_061011358
VERSION     XP_061011358.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155375.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..717
                     /product="SANT and BTB domain regulator of class switch
                     recombination isoform X1"
                     /calculated_mol_wt=81678
     Region          21..61
                     /region_name="SANT"
                     /note="SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding
                     domains; smart00717"
                     /db_xref="CDD:197842"
     Site            order(46..47,49..50,52..54,56..58)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238096"
     Region          147..248
                     /region_name="SANBR_BTB"
                     /note="SANT and BTB domain regulator of CSR, BTB domain;
                     pfam11822"
                     /db_xref="CDD:432102"
     CDS             1..717
                     /gene="SANBR"
                     /coded_by="XM_061155375.1:122..2275"
                     /db_xref="GeneID:133064870"
ORIGIN      
        1 msrgysennn flnnnnqmvl dmilypligi hqtinwetva rlvpgltpke cakrfdelks
       61 sgsspvdnqy splmaagesp vetlatyiks slldtqgefq etpvgqdtvs ktgrhsiast
      121 rncssesenc tthnggekte esegpnmvih vcdeaknlke dficprdlli semkyfaeyl
      181 svdaqrweev disvhcdvhi fnwlikyvkr ntkenkdcem pslepgnvis ilisseflkm
      241 dslveqciqy chknmnaiva tpcnmncina nlltriadlf thnevddlkd kkdkfrsklf
      301 ckkierlfdp eylnpdsrnn aatlyrcclc kklltketer ripcipgkin vdqhgniiyi
      361 hirdktwdvh eylnslfeel kswrdvywrl wgtvnwltcs rcyqtflcie fshcqyhset
      421 viyptagssl stvgtgiypc cnqkvlrfdp tqltkgckvk dhmvtlrdqg egedllscpt
      481 akilddlhkh kdvilvpfak dtisdsggpc dekgldcdil lepntpwgpk sgelnaflsl
      541 knwtlqlkqq slfseeeeyt tgsevtedev gdeeevskkq rkkekpkkft kqpkkqmssp
      601 cgqkkekale kstsrdvspf ivsmqknkwd atrslrfnqd aqreddqrrm seitghlikm
      661 rlgdldrvrs keakefaggi ysrleaqika svpvsarqss sekntrsksr fgqgrpa
//
LOCUS       XP_061011359             571 aa            linear   MAM 02-DEC-2023
DEFINITION  SANT and BTB domain regulator of class switch recombination isoform
            X2 [Dama dama].
ACCESSION   XP_061011359
VERSION     XP_061011359.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155376.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..571
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..571
                     /product="SANT and BTB domain regulator of class switch
                     recombination isoform X2"
                     /calculated_mol_wt=65723
     Region          1..102
                     /region_name="SANBR_BTB"
                     /note="SANT and BTB domain regulator of CSR, BTB domain;
                     pfam11822"
                     /db_xref="CDD:432102"
     CDS             1..571
                     /gene="SANBR"
                     /coded_by="XM_061155376.1:139..1854"
                     /db_xref="GeneID:133064870"
ORIGIN      
        1 mvihvcdeak nlkedficpr dllisemkyf aeylsvdaqr weevdisvhc dvhifnwlik
       61 yvkrntkenk dcempslepg nvisilisse flkmdslveq ciqychknmn aivatpcnmn
      121 cinanlltri adlfthnevd dlkdkkdkfr sklfckkier lfdpeylnpd srnnaatlyr
      181 cclckklltk eterripcip gkinvdqhgn iiyihirdkt wdvheylnsl feelkswrdv
      241 ywrlwgtvnw ltcsrcyqtf lciefshcqy hsetviypta gsslstvgtg iypccnqkvl
      301 rfdptqltkg ckvkdhmvtl rdqgegedll scptakildd lhkhkdvilv pfakdtisds
      361 ggpcdekgld cdillepntp wgpksgelna flslknwtlq lkqqslfsee eeyttgsevt
      421 edevgdeeev skkqrkkekp kkftkqpkkq msspcgqkke kalekstsrd vspfivsmqk
      481 nkwdatrslr fnqdaqredd qrrmseitgh likmrlgdld rvrskeakef aggiysrlea
      541 qikasvpvsa rqsssekntr sksrfgqgrp a
//
LOCUS       XP_061011360             532 aa            linear   MAM 02-DEC-2023
DEFINITION  tRNA pseudouridine synthase Pus10 isoform X1 [Dama dama].
ACCESSION   XP_061011360
VERSION     XP_061011360.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155377.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..532
                     /product="tRNA pseudouridine synthase Pus10 isoform X1"
                     /calculated_mol_wt=60387
     Region          <291..528
                     /region_name="Pus10"
                     /note="tRNA U54 and U55 pseudouridine synthase Pus10
                     [Translation, ribosomal structure and biogenesis];
                     COG1258"
                     /db_xref="CDD:440870"
     CDS             1..532
                     /gene="PUS10"
                     /coded_by="XM_061155377.1:137..1735"
                     /db_xref="GeneID:133064871"
ORIGIN      
        1 mfpltaenkr vaqlllstgt cprcifrfcg vdfhapyklp ykellselqk fleaeedelv
       61 sevpnpppkk irlqepedri dgmdslsqng egklsvtedg ssssknsnln vcnvclgilq
      121 dfcekefikk vsqkveasgf eftnlvlsis fppqlsvreh aawllvkqem gkqslslgrn
      181 divqlkeayk withplfsee lgvpidgksl fevsvvfahp etvedchflr aicpdcfkpa
      241 knkqsvftrm avmkalnkik eedfrkqfpc ppdspkavct vleiecahga vfvagrynky
      301 srnlpqtpwi idgerkless veelisdhll kvfkaesfnf sssgredvdv rtlgngrpfa
      361 ielvnphrvh ftsqeikelq qkinnssnki qvrdlqlvtr eaighmkege eektktysal
      421 iwtnkaiqrk dieflddikd lkidqktplr vlhrrplavr triihsmetc yvdehhfrls
      481 lktqagtyik efvhgdfgrt kpnigslmdv tadileldve svdvdwppal dd
//
LOCUS       XP_061011361             532 aa            linear   MAM 02-DEC-2023
DEFINITION  tRNA pseudouridine synthase Pus10 isoform X1 [Dama dama].
ACCESSION   XP_061011361
VERSION     XP_061011361.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155378.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..532
                     /product="tRNA pseudouridine synthase Pus10 isoform X1"
                     /calculated_mol_wt=60387
     Region          <291..528
                     /region_name="Pus10"
                     /note="tRNA U54 and U55 pseudouridine synthase Pus10
                     [Translation, ribosomal structure and biogenesis];
                     COG1258"
                     /db_xref="CDD:440870"
     CDS             1..532
                     /gene="PUS10"
                     /coded_by="XM_061155378.1:94..1692"
                     /db_xref="GeneID:133064871"
ORIGIN      
        1 mfpltaenkr vaqlllstgt cprcifrfcg vdfhapyklp ykellselqk fleaeedelv
       61 sevpnpppkk irlqepedri dgmdslsqng egklsvtedg ssssknsnln vcnvclgilq
      121 dfcekefikk vsqkveasgf eftnlvlsis fppqlsvreh aawllvkqem gkqslslgrn
      181 divqlkeayk withplfsee lgvpidgksl fevsvvfahp etvedchflr aicpdcfkpa
      241 knkqsvftrm avmkalnkik eedfrkqfpc ppdspkavct vleiecahga vfvagrynky
      301 srnlpqtpwi idgerkless veelisdhll kvfkaesfnf sssgredvdv rtlgngrpfa
      361 ielvnphrvh ftsqeikelq qkinnssnki qvrdlqlvtr eaighmkege eektktysal
      421 iwtnkaiqrk dieflddikd lkidqktplr vlhrrplavr triihsmetc yvdehhfrls
      481 lktqagtyik efvhgdfgrt kpnigslmdv tadileldve svdvdwppal dd
//
LOCUS       XP_061011362             532 aa            linear   MAM 02-DEC-2023
DEFINITION  tRNA pseudouridine synthase Pus10 isoform X1 [Dama dama].
ACCESSION   XP_061011362
VERSION     XP_061011362.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155379.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..532
                     /product="tRNA pseudouridine synthase Pus10 isoform X1"
                     /calculated_mol_wt=60387
     Region          <291..528
                     /region_name="Pus10"
                     /note="tRNA U54 and U55 pseudouridine synthase Pus10
                     [Translation, ribosomal structure and biogenesis];
                     COG1258"
                     /db_xref="CDD:440870"
     CDS             1..532
                     /gene="PUS10"
                     /coded_by="XM_061155379.1:88..1686"
                     /db_xref="GeneID:133064871"
ORIGIN      
        1 mfpltaenkr vaqlllstgt cprcifrfcg vdfhapyklp ykellselqk fleaeedelv
       61 sevpnpppkk irlqepedri dgmdslsqng egklsvtedg ssssknsnln vcnvclgilq
      121 dfcekefikk vsqkveasgf eftnlvlsis fppqlsvreh aawllvkqem gkqslslgrn
      181 divqlkeayk withplfsee lgvpidgksl fevsvvfahp etvedchflr aicpdcfkpa
      241 knkqsvftrm avmkalnkik eedfrkqfpc ppdspkavct vleiecahga vfvagrynky
      301 srnlpqtpwi idgerkless veelisdhll kvfkaesfnf sssgredvdv rtlgngrpfa
      361 ielvnphrvh ftsqeikelq qkinnssnki qvrdlqlvtr eaighmkege eektktysal
      421 iwtnkaiqrk dieflddikd lkidqktplr vlhrrplavr triihsmetc yvdehhfrls
      481 lktqagtyik efvhgdfgrt kpnigslmdv tadileldve svdvdwppal dd
//
LOCUS       XP_061011363             532 aa            linear   MAM 02-DEC-2023
DEFINITION  tRNA pseudouridine synthase Pus10 isoform X1 [Dama dama].
ACCESSION   XP_061011363
VERSION     XP_061011363.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155380.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..532
                     /product="tRNA pseudouridine synthase Pus10 isoform X1"
                     /calculated_mol_wt=60387
     Region          <291..528
                     /region_name="Pus10"
                     /note="tRNA U54 and U55 pseudouridine synthase Pus10
                     [Translation, ribosomal structure and biogenesis];
                     COG1258"
                     /db_xref="CDD:440870"
     CDS             1..532
                     /gene="PUS10"
                     /coded_by="XM_061155380.1:220..1818"
                     /db_xref="GeneID:133064871"
ORIGIN      
        1 mfpltaenkr vaqlllstgt cprcifrfcg vdfhapyklp ykellselqk fleaeedelv
       61 sevpnpppkk irlqepedri dgmdslsqng egklsvtedg ssssknsnln vcnvclgilq
      121 dfcekefikk vsqkveasgf eftnlvlsis fppqlsvreh aawllvkqem gkqslslgrn
      181 divqlkeayk withplfsee lgvpidgksl fevsvvfahp etvedchflr aicpdcfkpa
      241 knkqsvftrm avmkalnkik eedfrkqfpc ppdspkavct vleiecahga vfvagrynky
      301 srnlpqtpwi idgerkless veelisdhll kvfkaesfnf sssgredvdv rtlgngrpfa
      361 ielvnphrvh ftsqeikelq qkinnssnki qvrdlqlvtr eaighmkege eektktysal
      421 iwtnkaiqrk dieflddikd lkidqktplr vlhrrplavr triihsmetc yvdehhfrls
      481 lktqagtyik efvhgdfgrt kpnigslmdv tadileldve svdvdwppal dd
//
LOCUS       XP_061011364             450 aa            linear   MAM 02-DEC-2023
DEFINITION  tRNA pseudouridine synthase Pus10 isoform X2 [Dama dama].
ACCESSION   XP_061011364
VERSION     XP_061011364.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155381.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..450
                     /product="tRNA pseudouridine synthase Pus10 isoform X2"
                     /calculated_mol_wt=50958
     Region          <209..446
                     /region_name="Pus10"
                     /note="tRNA U54 and U55 pseudouridine synthase Pus10
                     [Translation, ribosomal structure and biogenesis];
                     COG1258"
                     /db_xref="CDD:440870"
     CDS             1..450
                     /gene="PUS10"
                     /coded_by="XM_061155381.1:492..1844"
                     /db_xref="GeneID:133064871"
ORIGIN      
        1 mdslsqngeg klsvtedgss ssknsnlnvc nvclgilqdf cekefikkvs qkveasgfef
       61 tnlvlsisfp pqlsvrehaa wllvkqemgk qslslgrndi vqlkeaykwi thplfseelg
      121 vpidgkslfe vsvvfahpet vedchflrai cpdcfkpakn kqsvftrmav mkalnkikee
      181 dfrkqfpcpp dspkavctvl eiecahgavf vagrynkysr nlpqtpwiid gerklessve
      241 elisdhllkv fkaesfnfss sgredvdvrt lgngrpfaie lvnphrvhft sqeikelqqk
      301 innssnkiqv rdlqlvtrea ighmkegeee ktktysaliw tnkaiqrkdi eflddikdlk
      361 idqktplrvl hrrplavrtr iihsmetcyv dehhfrlslk tqagtyikef vhgdfgrtkp
      421 nigslmdvta dileldvesv dvdwppaldd
//
LOCUS       XP_061011365             403 aa            linear   MAM 02-DEC-2023
DEFINITION  peroxisome biogenesis factor 13 [Dama dama].
ACCESSION   XP_061011365
VERSION     XP_061011365.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155382.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..403
                     /product="peroxisome biogenesis factor 13"
                     /calculated_mol_wt=44245
     Region          117..254
                     /region_name="Peroxin-13_N"
                     /note="Peroxin 13, N-terminal region; pfam04088"
                     /db_xref="CDD:461167"
     Region          276..333
                     /region_name="SH3_PEX13_eumet"
                     /note="Src Homology 3 domain of eumetazoan Peroxisomal
                     biogenesis factor 13; cd11864"
                     /db_xref="CDD:212798"
     Site            order(281,283,286,290,312..313,327,329..330)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212798"
     CDS             1..403
                     /gene="PEX13"
                     /coded_by="XM_061155382.1:67..1278"
                     /db_xref="GeneID:133064872"
ORIGIN      
        1 masqpppppk pwetrripga gpgpgpgptf qsadlgptll trpgqptltr vpppilprps
       61 qqtgssnlnt frpayssfss gygaygnsfy gsyspysygy nglgynrlrl ddlppsrfvq
      121 qaeessrgaf qsiesivhaf asvsmmmdat fsavynsfra vldvanhfsr lkihftkvfs
      181 afalvrtiry lyrrlqwmig lrrglenedl waesegtvac lsaedraans akswpiflff
      241 avilggpyli wkllsthsdd vtdntnwasg eddhvvarae ydfvavseee isfragdmln
      301 lalkeqqprv rgwllasldg qttglipany vkilgkrrgr ktvesskisk qqqsftnttl
      361 ikgataadsl deqeaafesv fvetnkvpva sdstgkngdk qdl
//
LOCUS       XP_061011366             591 aa            linear   MAM 02-DEC-2023
DEFINITION  proto-oncogene c-Rel [Dama dama].
ACCESSION   XP_061011366
VERSION     XP_061011366.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155383.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..591
                     /product="proto-oncogene c-Rel"
                     /calculated_mol_wt=65251
     Region          8..179
                     /region_name="RHD-n"
                     /note="N-terminal sub-domain of the Rel homology domain
                     (RHD); cl08275"
                     /db_xref="CDD:447596"
     Site            order(22,24..25,27..28,30..33,109,111..112,179)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143649"
     Region          186..281
                     /region_name="IPT_NFkappaB"
                     /note="IPT domain of the transcription factor NFkappaB and
                     related transcription factors. NFkappaB is considered a
                     central regulator of stress responses, activated by
                     different stressful conditions, including physical stress,
                     oxidative stress, and exposure to...; cd01177"
                     /db_xref="CDD:238582"
     Site            order(187,189..191,193..195,230..232,245,256,275,278,280)
                     /site_type="other"
                     /note="ankyrin protein binding site [polypeptide binding]"
                     /db_xref="CDD:238582"
     Site            order(189..190,192,205,207,209,237..238,241,243)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238582"
     Site            order(210,212,238..239)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238582"
     CDS             1..591
                     /gene="REL"
                     /coded_by="XM_061155383.1:305..2080"
                     /db_xref="GeneID:133064874"
ORIGIN      
        1 masggfnpci eiieqprqrg mrfrykcegr sagsipgehs tdnnrtypsi qisnyygklk
       61 vritlvtknd pykphphdlv gkdcrdgyye aefgqerrpl ffqnlgircv kkkevkeaii
      121 sriraginpf nvpeqqlldi edcdlnvvrl cfqvflpdeh gnlatalppv vsnpiydnra
      181 pntaelricr vnkncgsvkg gdeifllcdk vqkddievrf vlneweakgv fsqadvhrqv
      241 aivfktppyc kaitepvtvk mqlrrpsdqe vsesmdfryl pdekdtygnk akkqkttllf
      301 qklwqdcgvn fperprpspl gptgearfik kepnlfshga vlpetsrpvs sqaesyysss
      361 asisstlshp asailpmgtq sssgwssiah ptsrsvntns lsgfstgtls snsqvippfl
      421 emsdlnassa ciynntndig rmeassvspa dlygisdasm lpncpvnmit psndsmretd
      481 nprlvsmnle npscnsvldp rdlrqlhqms sssmstvtss staafvaqse afdgsdfnca
      541 dnsmineagp sngtnanshn fgqnsqysgi gamqneqlnd sfpfeffqvn l
//
LOCUS       XP_061011367             749 aa            linear   MAM 02-DEC-2023
DEFINITION  poly(A) polymerase gamma isoform X1 [Dama dama].
ACCESSION   XP_061011367
VERSION     XP_061011367.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155384.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..749
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..749
                     /product="poly(A) polymerase gamma isoform X1"
                     /calculated_mol_wt=84101
     Region          20..363
                     /region_name="PAP_central"
                     /note="Poly(A) polymerase central domain; pfam04928"
                     /db_xref="CDD:461486"
     Region          366..503
                     /region_name="PAP_RNA-bind"
                     /note="Poly(A) polymerase predicted RNA binding domain;
                     pfam04926"
                     /db_xref="CDD:461484"
     CDS             1..749
                     /gene="PAPOLG"
                     /coded_by="XM_061155384.1:230..2479"
                     /db_xref="GeneID:133064875"
ORIGIN      
        1 mkemsantvl dsqrqqkhyg itspislacp keidhiytqk lidamkpfgv fedeeelnhr
       61 lvvlgklnnl vkewisevse sknlppsvva tvggkiftfg syrlgvhtkg adidalcvap
      121 rhversdffq sffeklkhqd girnlraved afvpvikfef dgieidlvfa rlaiqtisen
      181 ldlrddsrlr sldircirsl ngcrvtdeil hlvpnketfr ltlravklwa krrgiysnml
      241 gflggvswam lvartcqlyp naaastlvhk fflvfskwew pnpvllkqpe esnlnlpvwd
      301 prvnpsdryh lmpiitpayp qqnstynvst strtvmveef kqglavtdei lqgksdwskl
      361 leppnffqky rhyivltasa steenhlewv glveskirvl vgnlernefi tlahvnpqsf
      421 pgnkehhkdn nyvsmwflgi ifrrvenaes vnidlthdiq sftdtvyrqa nninmlkegm
      481 kieathvkkk qlhhylpaei lqkkkkqsls dvtrsssgpq skrssldsnc ldssrdtdne
      541 tpfnspvsan kpskpdipps geternnaep aavivekpls vpaaqglsip vigakvdsal
      601 kavsppavct iptvvgrnvi prvtphnpvq gqphlngmsn vtknvtpkrp hspsvdgssk
      661 rlkdiekfir lestfkesha aedrkrksvd aiggecmpip tidtsrkkrl pskelpdsss
      721 pvpannirvi knsirltlnr slsrgdhnm
//
LOCUS       XP_061011368             744 aa            linear   MAM 02-DEC-2023
DEFINITION  poly(A) polymerase gamma isoform X2 [Dama dama].
ACCESSION   XP_061011368
VERSION     XP_061011368.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155385.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..744
                     /product="poly(A) polymerase gamma isoform X2"
                     /calculated_mol_wt=83571
     Region          20..358
                     /region_name="PAP_central"
                     /note="Poly(A) polymerase central domain; pfam04928"
                     /db_xref="CDD:461486"
     Region          361..498
                     /region_name="PAP_RNA-bind"
                     /note="Poly(A) polymerase predicted RNA binding domain;
                     pfam04926"
                     /db_xref="CDD:461484"
     CDS             1..744
                     /gene="PAPOLG"
                     /coded_by="XM_061155385.1:230..2464"
                     /db_xref="GeneID:133064875"
ORIGIN      
        1 mkemsantvl dsqrqqkhyg itspislacp keidhiytqk lidamkpfgv fedeeelnhr
       61 lvvlgklnnl vkewisenlp psvvatvggk iftfgsyrlg vhtkgadida lcvaprhver
      121 sdffqsffek lkhqdgirnl ravedafvpv ikfefdgiei dlvfarlaiq tisenldlrd
      181 dsrlrsldir cirslngcrv tdeilhlvpn ketfrltlra vklwakrrgi ysnmlgflgg
      241 vswamlvart cqlypnaaas tlvhkfflvf skwewpnpvl lkqpeesnln lpvwdprvnp
      301 sdryhlmpii tpaypqqnst ynvststrtv mveefkqgla vtdeilqgks dwsklleppn
      361 ffqkyrhyiv ltasasteen hlewvglves kirvlvgnle rnefitlahv npqsfpgnke
      421 hhkdnnyvsm wflgiifrrv enaesvnidl thdiqsftdt vyrqanninm lkegmkieat
      481 hvkkkqlhhy lpaeilqkkk kqslsdvtrs ssgpqskrss ldsncldssr dtdnetpfns
      541 pvsankpskp dippsgeter nnaepaaviv ekplsvpaaq glsipvigak vdsalkavsp
      601 pavctiptvv grnviprvtp hnpvqgqphl ngmsnvtknv tpkrphspsv dgsskrlkdi
      661 ekfirlestf keshaaedrk rksvdaigge cmpiptidts rkkrlpskel pdssspvpan
      721 nirviknsir ltlnrslsrg dhnm
//
LOCUS       XP_061011369             740 aa            linear   MAM 02-DEC-2023
DEFINITION  poly(A) polymerase gamma isoform X3 [Dama dama].
ACCESSION   XP_061011369
VERSION     XP_061011369.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155386.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..740
                     /product="poly(A) polymerase gamma isoform X3"
                     /calculated_mol_wt=83103
     Region          20..363
                     /region_name="PAP_central"
                     /note="Poly(A) polymerase central domain; pfam04928"
                     /db_xref="CDD:461486"
     Region          366..503
                     /region_name="PAP_RNA-bind"
                     /note="Poly(A) polymerase predicted RNA binding domain;
                     pfam04926"
                     /db_xref="CDD:461484"
     CDS             1..740
                     /gene="PAPOLG"
                     /coded_by="XM_061155386.1:230..2452"
                     /db_xref="GeneID:133064875"
ORIGIN      
        1 mkemsantvl dsqrqqkhyg itspislacp keidhiytqk lidamkpfgv fedeeelnhr
       61 lvvlgklnnl vkewisevse sknlppsvva tvggkiftfg syrlgvhtkg adidalcvap
      121 rhversdffq sffeklkhqd girnlraved afvpvikfef dgieidlvfa rlaiqtisen
      181 ldlrddsrlr sldircirsl ngcrvtdeil hlvpnketfr ltlravklwa krrgiysnml
      241 gflggvswam lvartcqlyp naaastlvhk fflvfskwew pnpvllkqpe esnlnlpvwd
      301 prvnpsdryh lmpiitpayp qqnstynvst strtvmveef kqglavtdei lqgksdwskl
      361 leppnffqky rhyivltasa steenhlewv glveskirvl vgnlernefi tlahvnpqsf
      421 pgnkehhkdn nyvsmwflgi ifrrvenaes vnidlthdiq sftdtvyrqa nninmlkegm
      481 kieathvkkk qlhhylpaei lqkkkkqsls dvtrsssgpq skrssldsnc ldssrdtdne
      541 tpfnspvsan kpskpdipps geternnaep aavivekpls vpaaqglsip vigakvdsal
      601 kavsppavct iptvvgrnvi prvtphnpvq gqphlngmsn vtknvtpkrp hspsvdgssk
      661 rlkdiekfir lestfkesha aedrkrksvd aiggecmpip tidtsrkkrl pskelpdsss
      721 pvpannirvi knsirltlnr
//
LOCUS       XP_061011370             705 aa            linear   MAM 02-DEC-2023
DEFINITION  poly(A) polymerase gamma isoform X4 [Dama dama].
ACCESSION   XP_061011370
VERSION     XP_061011370.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155387.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..705
                     /product="poly(A) polymerase gamma isoform X4"
                     /calculated_mol_wt=79116
     Region          1..319
                     /region_name="PAP_central"
                     /note="Poly(A) polymerase central domain; pfam04928"
                     /db_xref="CDD:461486"
     Region          322..459
                     /region_name="PAP_RNA-bind"
                     /note="Poly(A) polymerase predicted RNA binding domain;
                     pfam04926"
                     /db_xref="CDD:461484"
     CDS             1..705
                     /gene="PAPOLG"
                     /coded_by="XM_061155387.1:324..2441"
                     /db_xref="GeneID:133064875"
ORIGIN      
        1 mkpfgvfede eelnhrlvvl gklnnlvkew isevsesknl ppsvvatvgg kiftfgsyrl
       61 gvhtkgadid alcvaprhve rsdffqsffe klkhqdgirn lravedafvp vikfefdgie
      121 idlvfarlai qtisenldlr ddsrlrsldi rcirslngcr vtdeilhlvp nketfrltlr
      181 avklwakrrg iysnmlgflg gvswamlvar tcqlypnaaa stlvhkfflv fskwewpnpv
      241 llkqpeesnl nlpvwdprvn psdryhlmpi itpaypqqns tynvststrt vmveefkqgl
      301 avtdeilqgk sdwskllepp nffqkyrhyi vltasastee nhlewvglve skirvlvgnl
      361 ernefitlah vnpqsfpgnk ehhkdnnyvs mwflgiifrr venaesvnid lthdiqsftd
      421 tvyrqannin mlkegmkiea thvkkkqlhh ylpaeilqkk kkqslsdvtr sssgpqskrs
      481 sldsncldss rdtdnetpfn spvsankpsk pdippsgete rnnaepaavi vekplsvpaa
      541 qglsipviga kvdsalkavs ppavctiptv vgrnviprvt phnpvqgqph lngmsnvtkn
      601 vtpkrphsps vdgsskrlkd iekfirlest fkeshaaedr krksvdaigg ecmpiptidt
      661 srkkrlpske lpdssspvpa nnirviknsi rltlnrslsr gdhnm
//
LOCUS       XP_061011371             835 aa            linear   MAM 02-DEC-2023
DEFINITION  B-cell lymphoma/leukemia 11A isoform X1 [Dama dama].
ACCESSION   XP_061011371
VERSION     XP_061011371.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155388.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..835
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..835
                     /product="B-cell lymphoma/leukemia 11A isoform X1"
                     /calculated_mol_wt=91048
     Region          378..399
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          379..399
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          391..416
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          407..427
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          743..764
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          744..764
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(749,751,753,755..756,759..760,763,777,779,783..784,
                     787..788,791,807,809,811,813..814,817..818)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          756..781
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          772..792
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          802..820
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..835
                     /gene="BCL11A"
                     /coded_by="XM_061155388.1:445..2952"
                     /db_xref="GeneID:133064876"
ORIGIN      
        1 msrrkqgkpq hlskrefspe pleailtdde pdhgplgape gdhdlltcgq cqmnfplgdi
       61 lifiehkrkq cngslcleka vdkppspspi emkkasnpve vgiqvtpedd dclstssrgi
      121 cpkqehiadk llhwrglssp rsahgalipt pgmsaeyapq gickdepssy tcttckqpft
      181 sawfllqhaq nthglriyle sehgspltpr vgipsglgae cpsqpplhgi hiadnnpfnl
      241 lripgsvsre asglaegrfp ptpplfsppp rhhldphrie rlgaeemala thhpsafdrv
      301 lrlnpmamep pamdfsrrlr elagntsspp lspgrpspmq rllqpfqpgs kppflatppl
      361 pplqsappps qppvksksce fcgktfkfqs nlvvhrrsht gekpykcnlc dhactqaskl
      421 krhmkthmhk sspmtvksdd glstasspep gtsdlvgsas salksvvakf ksendpnlip
      481 engdeedeed deeeeeeeee eeeelteser vdygfglsle aarhhenssr gavvgvgdeg
      541 rplpdvmqgm vlssmqhfse afhqvlgekh krghlaeaeg hrdtcdedsv agesdriddg
      601 tvngrgcspg esasgglskk lllgspssls pfskriklek efdlppaamp ntenvysqwl
      661 agyaasrqlk dpflsfgdsr qspfassseh ssengslrfs tppgeldggi sgrsgtgsgg
      721 stphisgpgp grpsskegrr sdtceycgkv fkncsnltvh rrshtgerpy kcelcnyaca
      781 qsskltrhmk thgqvgkdvy kceickmpfs vystlekhmk kwhsdrvlnn dikte
//
LOCUS       XP_061011372             833 aa            linear   MAM 02-DEC-2023
DEFINITION  B-cell lymphoma/leukemia 11A isoform X2 [Dama dama].
ACCESSION   XP_061011372
VERSION     XP_061011372.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155389.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..833
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..833
                     /product="B-cell lymphoma/leukemia 11A isoform X2"
                     /calculated_mol_wt=90724
     Region          376..397
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          377..397
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          389..414
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          405..425
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          741..762
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          742..762
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(747,749,751,753..754,757..758,761,775,777,781..782,
                     785..786,789,805,807,809,811..812,815..816)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          754..779
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          770..790
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          800..818
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..833
                     /gene="BCL11A"
                     /coded_by="XM_061155389.1:1..2502"
                     /db_xref="GeneID:133064876"
ORIGIN      
        1 mrsrrgarrc evtarpaepl eailtddepd hgplgapegd hdlltcgqcq mnfplgdili
       61 fiehkrkqcn gslclekavd kppspspiem kkasnpvevg iqvtpedddc lstssrgicp
      121 kqehiadkll hwrglssprs ahgaliptpg msaeyapqgi ckdepssytc ttckqpftsa
      181 wfllqhaqnt hglriylese hgspltprvg ipsglgaecp sqpplhgihi adnnpfnllr
      241 ipgsvsreas glaegrfppt pplfsppprh hldphrierl gaeemalath hpsafdrvlr
      301 lnpmameppa mdfsrrlrel agntssppls pgrpspmqrl lqpfqpgskp pflatpplpp
      361 lqsapppsqp pvkskscefc gktfkfqsnl vvhrrshtge kpykcnlcdh actqasklkr
      421 hmkthmhkss pmtvksddgl stasspepgt sdlvgsassa lksvvakfks endpnlipen
      481 gdeedeedde eeeeeeeeee eelteservd ygfglsleaa rhhenssrga vvgvgdegrp
      541 lpdvmqgmvl ssmqhfseaf hqvlgekhkr ghlaeaeghr dtcdedsvag esdriddgtv
      601 ngrgcspges asgglskkll lgspsslspf skriklekef dlppaampnt envysqwlag
      661 yaasrqlkdp flsfgdsrqs pfasssehss engslrfstp pgeldggisg rsgtgsggst
      721 phisgpgpgr psskegrrsd tceycgkvfk ncsnltvhrr shtgerpykc elcnyacaqs
      781 skltrhmkth gqvgkdvykc eickmpfsvy stlekhmkkw hsdrvlnndi kte
//
LOCUS       XP_061011373             827 aa            linear   MAM 02-DEC-2023
DEFINITION  B-cell lymphoma/leukemia 11A isoform X3 [Dama dama].
ACCESSION   XP_061011373
VERSION     XP_061011373.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155390.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..827
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..827
                     /product="B-cell lymphoma/leukemia 11A isoform X3"
                     /calculated_mol_wt=89889
     Region          378..399
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          379..399
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          391..416
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          407..427
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          743..764
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          744..764
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Site            order(749,751,753,755..756,759..760,763,777,779..781,
                     783..784,788,791)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275370"
     Region          756..781
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          772..792
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     CDS             1..827
                     /gene="BCL11A"
                     /coded_by="XM_061155390.1:444..2927"
                     /db_xref="GeneID:133064876"
ORIGIN      
        1 msrrkqgkpq hlskrefspe pleailtdde pdhgplgape gdhdlltcgq cqmnfplgdi
       61 lifiehkrkq cngslcleka vdkppspspi emkkasnpve vgiqvtpedd dclstssrgi
      121 cpkqehiadk llhwrglssp rsahgalipt pgmsaeyapq gickdepssy tcttckqpft
      181 sawfllqhaq nthglriyle sehgspltpr vgipsglgae cpsqpplhgi hiadnnpfnl
      241 lripgsvsre asglaegrfp ptpplfsppp rhhldphrie rlgaeemala thhpsafdrv
      301 lrlnpmamep pamdfsrrlr elagntsspp lspgrpspmq rllqpfqpgs kppflatppl
      361 pplqsappps qppvksksce fcgktfkfqs nlvvhrrsht gekpykcnlc dhactqaskl
      421 krhmkthmhk sspmtvksdd glstasspep gtsdlvgsas salksvvakf ksendpnlip
      481 engdeedeed deeeeeeeee eeeelteser vdygfglsle aarhhenssr gavvgvgdeg
      541 rplpdvmqgm vlssmqhfse afhqvlgekh krghlaeaeg hrdtcdedsv agesdriddg
      601 tvngrgcspg esasgglskk lllgspssls pfskriklek efdlppaamp ntenvysqwl
      661 agyaasrqlk dpflsfgdsr qspfassseh ssengslrfs tppgeldggi sgrsgtgsgg
      721 stphisgpgp grpsskegrr sdtceycgkv fkncsnltvh rrshtgerpy kcelcnyaca
      781 qsskltrhmk thgqvlhtpp fgvvprelkm cgsfrmeare plsseki
//
LOCUS       XP_061011374             826 aa            linear   MAM 02-DEC-2023
DEFINITION  B-cell lymphoma/leukemia 11A isoform X4 [Dama dama].
ACCESSION   XP_061011374
VERSION     XP_061011374.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155391.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..826
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..826
                     /product="B-cell lymphoma/leukemia 11A isoform X4"
                     /calculated_mol_wt=89930
     Region          369..390
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          370..390
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(370,373,386,390)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          382..407
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          398..418
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          734..755
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          735..755
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(735,738,751,755)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Site            order(740,742,744,746..747,750..751,754,768,770,774..775,
                     778..779,782,798,800,802,804..805,808..809)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          747..772
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          763..783
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          793..811
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..826
                     /gene="BCL11A"
                     /coded_by="XM_061155391.1:42..2522"
                     /db_xref="GeneID:133064876"
ORIGIN      
        1 mfsrepdvka epleailtdd epdhgplgap egdhdlltcg qcqmnfplgd ilifiehkrk
       61 qcngslclek avdkppspsp iemkkasnpv evgiqvtped ddclstssrg icpkqehiad
      121 kllhwrglss prsahgalip tpgmsaeyap qgickdepss ytcttckqpf tsawfllqha
      181 qnthglriyl esehgspltp rvgipsglga ecpsqpplhg ihiadnnpfn llripgsvsr
      241 easglaegrf pptpplfspp prhhldphri erlgaeemal athhpsafdr vlrlnpmame
      301 ppamdfsrrl relagntssp plspgrpspm qrllqpfqpg skppflatpp lpplqsappp
      361 sqppvksksc efcgktfkfq snlvvhrrsh tgekpykcnl cdhactqask lkrhmkthmh
      421 ksspmtvksd dglstasspe pgtsdlvgsa ssalksvvak fksendpnli pengdeedee
      481 ddeeeeeeee eeeeeltese rvdygfglsl eaarhhenss rgavvgvgde grplpdvmqg
      541 mvlssmqhfs eafhqvlgek hkrghlaeae ghrdtcdeds vagesdridd gtvngrgcsp
      601 gesasgglsk klllgspssl spfskrikle kefdlppaam pntenvysqw lagyaasrql
      661 kdpflsfgds rqspfassse hssengslrf stppgeldgg isgrsgtgsg gstphisgpg
      721 pgrpsskegr rsdtceycgk vfkncsnltv hrrshtgerp ykcelcnyac aqsskltrhm
      781 kthgqvgkdv ykceickmpf svystlekhm kkwhsdrvln ndikte
//
LOCUS       XP_061011375             801 aa            linear   MAM 02-DEC-2023
DEFINITION  B-cell lymphoma/leukemia 11A isoform X5 [Dama dama].
ACCESSION   XP_061011375
VERSION     XP_061011375.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155392.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..801
                     /product="B-cell lymphoma/leukemia 11A isoform X5"
                     /calculated_mol_wt=87405
     Region          344..365
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          345..365
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          357..382
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          373..393
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          709..730
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          710..730
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(715,717,719,721..722,725..726,729,743,745,749..750,
                     753..754,757,773,775,777,779..780,783..784)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          722..747
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          738..758
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          768..786
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..801
                     /gene="BCL11A"
                     /coded_by="XM_061155392.1:450..2855"
                     /db_xref="GeneID:133064876"
ORIGIN      
        1 msrrkqgkpq hlskrefspe pleailtdde pdhgplgape gdhdlltcgq cqmnfplgdi
       61 lifiehkrkq cngslcleka vdkppspspi emkkasnpve vgiqvtpedd dclstssrgi
      121 cpkqehiagk depssytctt ckqpftsawf llqhaqnthg lriylesehg spltprvgip
      181 sglgaecpsq pplhgihiad nnpfnllrip gsvsreasgl aegrfpptpp lfsppprhhl
      241 dphrierlga eemalathhp safdrvlrln pmameppamd fsrrlrelag ntsspplspg
      301 rpspmqrllq pfqpgskppf latpplpplq sapppsqppv kskscefcgk tfkfqsnlvv
      361 hrrshtgekp ykcnlcdhac tqasklkrhm kthmhksspm tvksddglst asspepgtsd
      421 lvgsassalk svvakfksen dpnlipengd eedeeddeee eeeeeeeeee lteservdyg
      481 fglsleaarh henssrgavv gvgdegrplp dvmqgmvlss mqhfseafhq vlgekhkrgh
      541 laeaeghrdt cdedsvages driddgtvng rgcspgesas gglskklllg spsslspfsk
      601 riklekefdl ppaampnten vysqwlagya asrqlkdpfl sfgdsrqspf asssehssen
      661 gslrfstppg eldggisgrs gtgsggstph isgpgpgrps skegrrsdtc eycgkvfknc
      721 snltvhrrsh tgerpykcel cnyacaqssk ltrhmkthgq vgkdvykcei ckmpfsvyst
      781 lekhmkkwhs drvlnndikt e
//
LOCUS       XP_061011376             793 aa            linear   MAM 02-DEC-2023
DEFINITION  B-cell lymphoma/leukemia 11A isoform X6 [Dama dama].
ACCESSION   XP_061011376
VERSION     XP_061011376.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155393.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..793
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..793
                     /product="B-cell lymphoma/leukemia 11A isoform X6"
                     /calculated_mol_wt=86246
     Region          344..365
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          345..365
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(345,348,361,365)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          357..382
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          373..393
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          709..730
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          710..730
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Site            order(715,717,719,721..722,725..726,729,743,745..747,
                     749..750,754,757)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275370"
     Region          722..747
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          738..758
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     CDS             1..793
                     /gene="BCL11A"
                     /coded_by="XM_061155393.1:448..2829"
                     /db_xref="GeneID:133064876"
ORIGIN      
        1 msrrkqgkpq hlskrefspe pleailtdde pdhgplgape gdhdlltcgq cqmnfplgdi
       61 lifiehkrkq cngslcleka vdkppspspi emkkasnpve vgiqvtpedd dclstssrgi
      121 cpkqehiagk depssytctt ckqpftsawf llqhaqnthg lriylesehg spltprvgip
      181 sglgaecpsq pplhgihiad nnpfnllrip gsvsreasgl aegrfpptpp lfsppprhhl
      241 dphrierlga eemalathhp safdrvlrln pmameppamd fsrrlrelag ntsspplspg
      301 rpspmqrllq pfqpgskppf latpplpplq sapppsqppv kskscefcgk tfkfqsnlvv
      361 hrrshtgekp ykcnlcdhac tqasklkrhm kthmhksspm tvksddglst asspepgtsd
      421 lvgsassalk svvakfksen dpnlipengd eedeeddeee eeeeeeeeee lteservdyg
      481 fglsleaarh henssrgavv gvgdegrplp dvmqgmvlss mqhfseafhq vlgekhkrgh
      541 laeaeghrdt cdedsvages driddgtvng rgcspgesas gglskklllg spsslspfsk
      601 riklekefdl ppaampnten vysqwlagya asrqlkdpfl sfgdsrqspf asssehssen
      661 gslrfstppg eldggisgrs gtgsggstph isgpgpgrps skegrrsdtc eycgkvfknc
      721 snltvhrrsh tgerpykcel cnyacaqssk ltrhmkthgq vlhtppfgvv prelkmcgsf
      781 rmeareplss eki
//
LOCUS       XP_061011377             773 aa            linear   MAM 02-DEC-2023
DEFINITION  B-cell lymphoma/leukemia 11A isoform X7 [Dama dama].
ACCESSION   XP_061011377
VERSION     XP_061011377.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155394.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..773
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..773
                     /product="B-cell lymphoma/leukemia 11A isoform X7"
                     /calculated_mol_wt=83712
     Region          378..399
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          379..399
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          391..416
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          407..427
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..773
                     /gene="BCL11A"
                     /coded_by="XM_061155394.1:442..2763"
                     /db_xref="GeneID:133064876"
ORIGIN      
        1 msrrkqgkpq hlskrefspe pleailtdde pdhgplgape gdhdlltcgq cqmnfplgdi
       61 lifiehkrkq cngslcleka vdkppspspi emkkasnpve vgiqvtpedd dclstssrgi
      121 cpkqehiadk llhwrglssp rsahgalipt pgmsaeyapq gickdepssy tcttckqpft
      181 sawfllqhaq nthglriyle sehgspltpr vgipsglgae cpsqpplhgi hiadnnpfnl
      241 lripgsvsre asglaegrfp ptpplfsppp rhhldphrie rlgaeemala thhpsafdrv
      301 lrlnpmamep pamdfsrrlr elagntsspp lspgrpspmq rllqpfqpgs kppflatppl
      361 pplqsappps qppvksksce fcgktfkfqs nlvvhrrsht gekpykcnlc dhactqaskl
      421 krhmkthmhk sspmtvksdd glstasspep gtsdlvgsas salksvvakf ksendpnlip
      481 engdeedeed deeeeeeeee eeeelteser vdygfglsle aarhhenssr gavvgvgdeg
      541 rplpdvmqgm vlssmqhfse afhqvlgekh krghlaeaeg hrdtcdedsv agesdriddg
      601 tvngrgcspg esasgglskk lllgspssls pfskriklek efdlppaamp ntenvysqwl
      661 agyaasrqlk dpflsfgdsr qspfassseh ssengslrfs tppgeldggi sgrsgtgsgg
      721 stphisgpgp grpsskegrr sdtcsshtpi rrsaqraqdv wqfsdgssrt lkf
//
LOCUS       XP_061011378             739 aa            linear   MAM 02-DEC-2023
DEFINITION  B-cell lymphoma/leukemia 11A isoform X8 [Dama dama].
ACCESSION   XP_061011378
VERSION     XP_061011378.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155395.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..739
                     /product="B-cell lymphoma/leukemia 11A isoform X8"
                     /calculated_mol_wt=80068
     Region          344..365
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          345..365
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Site            order(350,352,354,356..357,360..361,364,378,380..382,
                     384..385,389,392)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275370"
     Region          357..382
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          373..393
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     CDS             1..739
                     /gene="BCL11A"
                     /coded_by="XM_061155395.1:447..2666"
                     /db_xref="GeneID:133064876"
ORIGIN      
        1 msrrkqgkpq hlskrefspe pleailtdde pdhgplgape gdhdlltcgq cqmnfplgdi
       61 lifiehkrkq cngslcleka vdkppspspi emkkasnpve vgiqvtpedd dclstssrgi
      121 cpkqehiagk depssytctt ckqpftsawf llqhaqnthg lriylesehg spltprvgip
      181 sglgaecpsq pplhgihiad nnpfnllrip gsvsreasgl aegrfpptpp lfsppprhhl
      241 dphrierlga eemalathhp safdrvlrln pmameppamd fsrrlrelag ntsspplspg
      301 rpspmqrllq pfqpgskppf latpplpplq sapppsqppv kskscefcgk tfkfqsnlvv
      361 hrrshtgekp ykcnlcdhac tqasklkrhm kthmhksspm tvksddglst asspepgtsd
      421 lvgsassalk svvakfksen dpnlipengd eedeeddeee eeeeeeeeee lteservdyg
      481 fglsleaarh henssrgavv gvgdegrplp dvmqgmvlss mqhfseafhq vlgekhkrgh
      541 laeaeghrdt cdedsvages driddgtvng rgcspgesas gglskklllg spsslspfsk
      601 riklekefdl ppaampnten vysqwlagya asrqlkdpfl sfgdsrqspf asssehssen
      661 gslrfstppg eldggisgrs gtgsggstph isgpgpgrps skegrrsdtc sshtpirrsa
      721 qraqdvwqfs dgssrtlkf
//
LOCUS       XP_061011379             243 aa            linear   MAM 02-DEC-2023
DEFINITION  B-cell lymphoma/leukemia 11A isoform X9 [Dama dama].
ACCESSION   XP_061011379
VERSION     XP_061011379.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155396.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..243
                     /product="B-cell lymphoma/leukemia 11A isoform X9"
                     /calculated_mol_wt=26735
     CDS             1..243
                     /gene="BCL11A"
                     /coded_by="XM_061155396.1:404..1135"
                     /db_xref="GeneID:133064876"
ORIGIN      
        1 msrrkqgkpq hlskrefspe pleailtdde pdhgplgape gdhdlltcgq cqmnfplgdi
       61 lifiehkrkq cngslcleka vdkppspspi emkkasnpve vgiqvtpedd dclstssrgi
      121 cpkqehiadk llhwrglssp rsahgalipt pgmsaeyapq gickdepssy tcttckqpft
      181 sawfllqhaq nthglriyle sehgspltpr vlhtppfgvv prelkmcgsf rmeareplss
      241 eki
//
LOCUS       XP_061011380             209 aa            linear   MAM 02-DEC-2023
DEFINITION  B-cell lymphoma/leukemia 11A isoform X10 [Dama dama].
ACCESSION   XP_061011380
VERSION     XP_061011380.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155397.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..209
                     /product="B-cell lymphoma/leukemia 11A isoform X10"
                     /calculated_mol_wt=23091
     Region          102..>159
                     /region_name="lambda-1"
                     /note="inner capsid protein lambda-1 or VP3; cd11674"
                     /db_xref="CDD:212564"
     Site            order(138,141,154,159)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:212564"
     CDS             1..209
                     /gene="BCL11A"
                     /coded_by="XM_061155397.1:414..1043"
                     /db_xref="GeneID:133064876"
ORIGIN      
        1 msrrkqgkpq hlskrefspe pleailtdde pdhgplgape gdhdlltcgq cqmnfplgdi
       61 lifiehkrkq cngslcleka vdkppspspi emkkasnpve vgiqvtpedd dclstssrgi
      121 cpkqehiagk depssytctt ckqpftsawf llqhaqnthg lriylesehg spltprvlht
      181 ppfgvvprel kmcgsfrmea replsseki
//
LOCUS       XP_061011381             509 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase VRK2 isoform X1 [Dama dama].
ACCESSION   XP_061011381
VERSION     XP_061011381.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155398.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..509
                     /product="serine/threonine-protein kinase VRK2 isoform X1"
                     /calculated_mol_wt=58247
     Region          16..314
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(35..38,41,43,59,61,101,121..124,166,170..171,173,
                     185..186)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..509
                     /gene="VRK2"
                     /coded_by="XM_061155398.1:181..1710"
                     /db_xref="GeneID:133064880"
ORIGIN      
        1 mpprrkekyk lpiplpegtv lddmegkqwv lgkligsggf gliylafptn kpdkdarhvi
       61 kveyqengpl fselkfyqra akkecikkwi elkkldylgi pqfygsgite fkgksyrfmv
      121 merlgidlqk isdqngtfkk stvlqlgirm ldvleyihen eyvhgdikaa nlllgyrnpd
      181 rvyladygls yrycpngnhk qyqenpkkgh ngtieftsld ahkgvalsrr sdleilgycl
      241 lrwlcgslpw ewslqdpvav qaaktnllde lpesvlqwap sgsscreiaq ylvcahnlay
      301 dekpdyqmlr kilnpsgipl gplefctkge slnmrapnnq kvdsrkaatk qvyqvqntli
      361 gkkghsersa esrtprrkvq eekkltglfs setvqestrr rqkycesqef qndvkssphk
      421 ssciqfpnsc yephqdftnp dmfnksssps wytntsttgm evteldsstg fwfavsqftf
      481 seeikvdiyy ysftiiflli lvclalyfl
//
LOCUS       XP_061011382             509 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase VRK2 isoform X1 [Dama dama].
ACCESSION   XP_061011382
VERSION     XP_061011382.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155399.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..509
                     /product="serine/threonine-protein kinase VRK2 isoform X1"
                     /calculated_mol_wt=58247
     Region          16..314
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(35..38,41,43,59,61,101,121..124,166,170..171,173,
                     185..186)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..509
                     /gene="VRK2"
                     /coded_by="XM_061155399.1:160..1689"
                     /db_xref="GeneID:133064880"
ORIGIN      
        1 mpprrkekyk lpiplpegtv lddmegkqwv lgkligsggf gliylafptn kpdkdarhvi
       61 kveyqengpl fselkfyqra akkecikkwi elkkldylgi pqfygsgite fkgksyrfmv
      121 merlgidlqk isdqngtfkk stvlqlgirm ldvleyihen eyvhgdikaa nlllgyrnpd
      181 rvyladygls yrycpngnhk qyqenpkkgh ngtieftsld ahkgvalsrr sdleilgycl
      241 lrwlcgslpw ewslqdpvav qaaktnllde lpesvlqwap sgsscreiaq ylvcahnlay
      301 dekpdyqmlr kilnpsgipl gplefctkge slnmrapnnq kvdsrkaatk qvyqvqntli
      361 gkkghsersa esrtprrkvq eekkltglfs setvqestrr rqkycesqef qndvkssphk
      421 ssciqfpnsc yephqdftnp dmfnksssps wytntsttgm evteldsstg fwfavsqftf
      481 seeikvdiyy ysftiiflli lvclalyfl
//
LOCUS       XP_061011383             398 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase VRK2 isoform X2 [Dama dama].
ACCESSION   XP_061011383
VERSION     XP_061011383.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155400.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..398
                     /product="serine/threonine-protein kinase VRK2 isoform X2"
                     /calculated_mol_wt=45252
     Region          16..314
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(35..38,41,43,59,61,101,121..124,166,170..171,173,
                     185..186)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..398
                     /gene="VRK2"
                     /coded_by="XM_061155400.1:181..1377"
                     /db_xref="GeneID:133064880"
ORIGIN      
        1 mpprrkekyk lpiplpegtv lddmegkqwv lgkligsggf gliylafptn kpdkdarhvi
       61 kveyqengpl fselkfyqra akkecikkwi elkkldylgi pqfygsgite fkgksyrfmv
      121 merlgidlqk isdqngtfkk stvlqlgirm ldvleyihen eyvhgdikaa nlllgyrnpd
      181 rvyladygls yrycpngnhk qyqenpkkgh ngtieftsld ahkgvalsrr sdleilgycl
      241 lrwlcgslpw ewslqdpvav qaaktnllde lpesvlqwap sgsscreiaq ylvcahnlay
      301 dekpdyqmlr kilnpsgipl gplefctkge slnmrapnnq kvdsrkaatk qvyqvqntli
      361 gkkghsersa esrtprrkvq eekkltglfs setvqvvf
//
LOCUS       XP_061011384             374 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase FANCL isoform X1 [Dama dama].
ACCESSION   XP_061011384
VERSION     XP_061011384.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155401.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..374
                     /product="E3 ubiquitin-protein ligase FANCL isoform X1"
                     /calculated_mol_wt=42547
     Region          5..93
                     /region_name="FANCL_d1"
                     /note="FANCL UBC-like domain 1; pfam09765"
                     /db_xref="CDD:462888"
     Region          108..196
                     /region_name="FANCL_d2"
                     /note="FANCL UBC-like domain 2; pfam18890"
                     /db_xref="CDD:465900"
     Region          199..294
                     /region_name="FANCL_d3"
                     /note="FANCL UBC-like domain 3; pfam18891"
                     /db_xref="CDD:465901"
     Region          302..370
                     /region_name="FANCL_C"
                     /note="FANCL C-terminal domain; pfam11793"
                     /db_xref="CDD:463350"
     CDS             1..374
                     /gene="FANCL"
                     /coded_by="XM_061155401.1:65..1189"
                     /db_xref="GeneID:133064881"
ORIGIN      
        1 maeteatllr qfplflpqnr aktvyegfis aqgrdfhlrl llpkdlqlrn arllcswqlr
       61 tvlngyhhvv qqrmqqspdl vsfmmelkmi levalknkke phvlspppkf yssligeirt
      121 lgwdklvsvd pcfstiklka dvsgrehlit vklkakypae spdcvvdfpv pfsvswtpqs
      181 slisiytqfl aaveslktfw dvmdeidekt wvlepekptr satarrivlg nnvsinievd
      241 prhptmlpec cflgadhvvk plgirlsrni hlwdpensll qnlkdvleid fparaileks
      301 dfsmdcgicy ayqldgaipd qvcdnsqcgq sfhyiclyew lrglltsrqs fniifgecpy
      361 cskpitlkms grka
//
LOCUS       XP_061011385             371 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase FANCL isoform X2 [Dama dama].
ACCESSION   XP_061011385
VERSION     XP_061011385.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155402.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..371
                     /product="E3 ubiquitin-protein ligase FANCL isoform X2"
                     /calculated_mol_wt=41576
     Region          122..193
                     /region_name="FANCL_d2"
                     /note="FANCL UBC-like domain 2; pfam18890"
                     /db_xref="CDD:465900"
     Region          196..291
                     /region_name="FANCL_d3"
                     /note="FANCL UBC-like domain 3; pfam18891"
                     /db_xref="CDD:465901"
     Region          299..367
                     /region_name="FANCL_C"
                     /note="FANCL C-terminal domain; pfam11793"
                     /db_xref="CDD:463350"
     CDS             1..371
                     /gene="FANCL"
                     /coded_by="XM_061155402.1:342..1457"
                     /db_xref="GeneID:133064881"
ORIGIN      
        1 mirfgqvqqs lpsclalgpm llpaepnllw lelspgiptt tgpsflptes srlpakragv
       61 rlsapqaqav lrmcgtsgrr ypdvstdrel wrrrkrpcca sfrsfcprtg rkpcmkasfr
      121 lrlvsvdpcf stiklkadvs grehlitvkl kakypaespd cvvdfpvpfs vswtpqssli
      181 siytqflaav eslktfwdvm deidektwvl epekptrsat arrivlgnnv sinievdprh
      241 ptmlpeccfl gadhvvkplg irlsrnihlw dpensllqnl kdvleidfpa raileksdfs
      301 mdcgicyayq ldgaipdqvc dnsqcgqsfh yiclyewlrg lltsrqsfni ifgecpycsk
      361 pitlkmsgrk a
//
LOCUS       XP_061011386             315 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase FANCL isoform X3 [Dama dama].
ACCESSION   XP_061011386
VERSION     XP_061011386.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155403.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..315
                     /product="E3 ubiquitin-protein ligase FANCL isoform X3"
                     /calculated_mol_wt=35476
     Region          5..>33
                     /region_name="FANCL_d1"
                     /note="FANCL UBC-like domain 1; pfam09765"
                     /db_xref="CDD:462888"
     Region          49..137
                     /region_name="FANCL_d2"
                     /note="FANCL UBC-like domain 2; pfam18890"
                     /db_xref="CDD:465900"
     Region          140..235
                     /region_name="FANCL_d3"
                     /note="FANCL UBC-like domain 3; pfam18891"
                     /db_xref="CDD:465901"
     Region          243..311
                     /region_name="FANCL_C"
                     /note="FANCL C-terminal domain; pfam11793"
                     /db_xref="CDD:463350"
     CDS             1..315
                     /gene="FANCL"
                     /coded_by="XM_061155403.1:65..1012"
                     /db_xref="GeneID:133064881"
ORIGIN      
        1 maeteatllr qfplflpqnr aktvyegfis aqevalknkk ephvlspppk fyssligeir
       61 tlgwdklvsv dpcfstiklk advsgrehli tvklkakypa espdcvvdfp vpfsvswtpq
      121 sslisiytqf laaveslktf wdvmdeidek twvlepekpt rsatarrivl gnnvsiniev
      181 dprhptmlpe ccflgadhvv kplgirlsrn ihlwdpensl lqnlkdvlei dfparailek
      241 sdfsmdcgic yayqldgaip dqvcdnsqcg qsfhyiclye wlrglltsrq sfniifgecp
      301 ycskpitlkm sgrka
//
LOCUS       XP_061011387             309 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase FANCL isoform X4 [Dama dama].
ACCESSION   XP_061011387
VERSION     XP_061011387.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155404.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..309
                     /product="E3 ubiquitin-protein ligase FANCL isoform X4"
                     /calculated_mol_wt=35307
     Region          5..91
                     /region_name="FANCL_d1"
                     /note="FANCL UBC-like domain 1; pfam09765"
                     /db_xref="CDD:462888"
     Region          <92..131
                     /region_name="FANCL_d2"
                     /note="FANCL UBC-like domain 2; pfam18890"
                     /db_xref="CDD:465900"
     Region          134..229
                     /region_name="FANCL_d3"
                     /note="FANCL UBC-like domain 3; pfam18891"
                     /db_xref="CDD:465901"
     Region          237..305
                     /region_name="FANCL_C"
                     /note="FANCL C-terminal domain; pfam11793"
                     /db_xref="CDD:463350"
     CDS             1..309
                     /gene="FANCL"
                     /coded_by="XM_061155404.1:64..993"
                     /db_xref="GeneID:133064881"
ORIGIN      
        1 maeteatllr qfplflpqnr aktvyegfis aqgrdfhlrl llpkdlqlrn arllcswqlr
       61 tvlngyhhvv qqrmqqspdl vsfmmelkmi lypaespdcv vdfpvpfsvs wtpqsslisi
      121 ytqflaaves lktfwdvmde idektwvlep ekptrsatar rivlgnnvsi nievdprhpt
      181 mlpeccflga dhvvkplgir lsrnihlwdp ensllqnlkd vleidfpara ileksdfsmd
      241 cgicyayqld gaipdqvcdn sqcgqsfhyi clyewlrgll tsrqsfniif gecpycskpi
      301 tlkmsgrka
//
LOCUS       XP_061011388             301 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase FANCL isoform X5 [Dama dama].
ACCESSION   XP_061011388
VERSION     XP_061011388.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155405.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..301
                     /product="E3 ubiquitin-protein ligase FANCL isoform X5"
                     /calculated_mol_wt=33947
     Region          <2..20
                     /region_name="FANCL_d1"
                     /note="FANCL UBC-like domain 1; pfam09765"
                     /db_xref="CDD:462888"
     Region          35..123
                     /region_name="FANCL_d2"
                     /note="FANCL UBC-like domain 2; pfam18890"
                     /db_xref="CDD:465900"
     Region          126..221
                     /region_name="FANCL_d3"
                     /note="FANCL UBC-like domain 3; pfam18891"
                     /db_xref="CDD:465901"
     Region          229..297
                     /region_name="FANCL_C"
                     /note="FANCL C-terminal domain; pfam11793"
                     /db_xref="CDD:463350"
     CDS             1..301
                     /gene="FANCL"
                     /coded_by="XM_061155405.1:260..1165"
                     /db_xref="GeneID:133064881"
ORIGIN      
        1 mqqspdlvsf mmelkmilev alknkkephv lspppkfyss ligeirtlgw dklvsvdpcf
       61 stiklkadvs grehlitvkl kakypaespd cvvdfpvpfs vswtpqssli siytqflaav
      121 eslktfwdvm deidektwvl epekptrsat arrivlgnnv sinievdprh ptmlpeccfl
      181 gadhvvkplg irlsrnihlw dpensllqnl kdvleidfpa raileksdfs mdcgicyayq
      241 ldgaipdqvc dnsqcgqsfh yiclyewlrg lltsrqsfni ifgecpycsk pitlkmsgrk
      301 a
//
LOCUS       XP_061011389             298 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase FANCL isoform X6 [Dama dama].
ACCESSION   XP_061011389
VERSION     XP_061011389.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155406.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..298
                     /product="E3 ubiquitin-protein ligase FANCL isoform X6"
                     /calculated_mol_wt=33983
     Region          5..80
                     /region_name="FANCL_d1"
                     /note="FANCL UBC-like domain 1; pfam09765"
                     /db_xref="CDD:462888"
     Region          <78..120
                     /region_name="FANCL_d2"
                     /note="FANCL UBC-like domain 2; pfam18890"
                     /db_xref="CDD:465900"
     Region          123..218
                     /region_name="FANCL_d3"
                     /note="FANCL UBC-like domain 3; pfam18891"
                     /db_xref="CDD:465901"
     Region          226..294
                     /region_name="FANCL_C"
                     /note="FANCL C-terminal domain; pfam11793"
                     /db_xref="CDD:463350"
     CDS             1..298
                     /gene="FANCL"
                     /coded_by="XM_061155406.1:64..960"
                     /db_xref="GeneID:133064881"
ORIGIN      
        1 maeteatllr qfplflpqnr aktvyegfis aqgrdfhlrl llpkdlqlrn arllcswqlr
       61 tvlngyhhvv qqrmqqspdl ypaespdcvv dfpvpfsvsw tpqsslisiy tqflaavesl
      121 ktfwdvmdei dektwvlepe kptrsatarr ivlgnnvsin ievdprhptm lpeccflgad
      181 hvvkplgirl srnihlwdpe nsllqnlkdv leidfparai leksdfsmdc gicyayqldg
      241 aipdqvcdns qcgqsfhyic lyewlrgllt srqsfniifg ecpycskpit lkmsgrka
//
LOCUS       XP_061011390             381 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase KCMF1-like [Dama dama].
ACCESSION   XP_061011390
VERSION     XP_061011390.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155407.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..381
                     /product="E3 ubiquitin-protein ligase KCMF1-like"
                     /calculated_mol_wt=41807
     Region          7..55
                     /region_name="ZZ_PCMF_like"
                     /note="Zinc finger, ZZ type. Zinc finger present in
                     potassium channel modulatory factor (PCMF) 1 and related
                     proteins. The ZZ motif coordinates two zinc ions and most
                     likely participates in ligand binding or molecular
                     scaffolding. Human potassium channel...; cd02338"
                     /db_xref="CDD:239078"
     Site            order(9,12,24,27,33,36,46,50)
                     /site_type="other"
                     /note="Zinc-binding sites [ion binding]"
                     /db_xref="CDD:239078"
     Site            order(9,12,33,36)
                     /site_type="other"
                     /note="zinc cluster 1 [ion binding]"
                     /db_xref="CDD:239078"
     Site            order(10,21,23,29,31)
                     /site_type="active"
                     /note="putative charged binding surface [active]"
                     /db_xref="CDD:239078"
     Site            order(22,37,52,55)
                     /site_type="active"
                     /note="putative hydrophobic binding surface [active]"
                     /db_xref="CDD:239078"
     Site            order(24,27,46,50)
                     /site_type="other"
                     /note="zinc cluster 2 [ion binding]"
                     /db_xref="CDD:239078"
     Region          76..137
                     /region_name="zf-Di19"
                     /note="Drought induced 19 protein (Di19), zinc-binding;
                     pfam05605"
                     /db_xref="CDD:428539"
     CDS             1..381
                     /gene="LOC133064884"
                     /coded_by="XM_061155407.1:116..1261"
                     /db_xref="GeneID:133064884"
ORIGIN      
        1 msrhegvscd aclkgnfrgr rykclicydy dlcascyesg atttrhttdh pmqctltrvd
       61 fdlyyggeaf sveqpqsftc pycgkmgyte tslqehvtse haetstdvic picaalpggd
      121 phhvtddfaa hltlehrapr dldessgvrh vrrmfhpgrg lggprarrsn mhftssstgg
      181 lsssqssysp snreamdpia ellsqlsgvr rsaggqlnss gpsasqlqql qmqlqlerqh
      241 araarqqlet arnatrrtnt ssvtttitqs tattntante ssqqtiqnsq llltrlndpk
      301 mseterqsme seradrslfv qelllstlvr eessssdede rgemadfgam gcvdimpldv
      361 alenlnlkes nkgneppppp l
//
LOCUS       XP_061011391             498 aa            linear   MAM 02-DEC-2023
DEFINITION  EGF-containing fibulin-like extracellular matrix protein 1 [Dama
            dama].
ACCESSION   XP_061011391
VERSION     XP_061011391.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155408.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..498
                     /product="EGF-containing fibulin-like extracellular matrix
                     protein 1"
                     /calculated_mol_wt=54706
     Region          44..71
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cl21504"
                     /db_xref="CDD:473889"
     Region          178..209
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF domain; pfam07645"
                     /db_xref="CDD:429571"
     Site            order(178,181,197)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          219..249
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(219,222,235)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          259..298
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(259,262,275)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          299..338
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(299,302,316)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          339..>364
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     CDS             1..498
                     /gene="EFEMP1"
                     /coded_by="XM_061155408.1:140..1636"
                     /db_xref="GeneID:133064885"
ORIGIN      
        1 mlkalfltml tlalvksqdt eetitytqct dgyewdpvrq qckdidecdi vpdackggmk
       61 cvnhyggylc lpktaqiivn neqpqqetpa aegvgaaana aatsstgtgg vaasgmaasg
      121 vvpgggfvas aaaevqtgrn nfvirrnpad pqripanpsh riqcatgyeq sehnvcqdid
      181 ectagthncr adqvcinlrg sftcqcppgy qkrgeqcvdi decaippych qrcvntpgsf
      241 ycqcspgfql aannytcvdi necdasnqca qqcynilgsf icqcnqgyel ssdrlncedi
      301 decrtssylc qyqcvnepgk fscmcpqgyq vvrgrtcqdi necettnecr edemcwnyhg
      361 gfrcyprnpc qdpyvltsen rcvcpvsnam crelpqsivy kymsirsdrs vpsdifqiqa
      421 ttiyantint friksgneng efylrqtspv samlvlvksl sgpreyivdl emltvnsigt
      481 frtssvlrlt iivgpfsf
//
LOCUS       XP_061011392             498 aa            linear   MAM 02-DEC-2023
DEFINITION  EGF-containing fibulin-like extracellular matrix protein 1 [Dama
            dama].
ACCESSION   XP_061011392
VERSION     XP_061011392.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155409.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..498
                     /product="EGF-containing fibulin-like extracellular matrix
                     protein 1"
                     /calculated_mol_wt=54706
     Region          44..71
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cl21504"
                     /db_xref="CDD:473889"
     Region          178..209
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF domain; pfam07645"
                     /db_xref="CDD:429571"
     Site            order(178,181,197)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          219..249
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(219,222,235)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          259..298
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(259,262,275)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          299..338
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(299,302,316)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          339..>364
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     CDS             1..498
                     /gene="EFEMP1"
                     /coded_by="XM_061155409.1:27..1523"
                     /db_xref="GeneID:133064885"
ORIGIN      
        1 mlkalfltml tlalvksqdt eetitytqct dgyewdpvrq qckdidecdi vpdackggmk
       61 cvnhyggylc lpktaqiivn neqpqqetpa aegvgaaana aatsstgtgg vaasgmaasg
      121 vvpgggfvas aaaevqtgrn nfvirrnpad pqripanpsh riqcatgyeq sehnvcqdid
      181 ectagthncr adqvcinlrg sftcqcppgy qkrgeqcvdi decaippych qrcvntpgsf
      241 ycqcspgfql aannytcvdi necdasnqca qqcynilgsf icqcnqgyel ssdrlncedi
      301 decrtssylc qyqcvnepgk fscmcpqgyq vvrgrtcqdi necettnecr edemcwnyhg
      361 gfrcyprnpc qdpyvltsen rcvcpvsnam crelpqsivy kymsirsdrs vpsdifqiqa
      421 ttiyantint friksgneng efylrqtspv samlvlvksl sgpreyivdl emltvnsigt
      481 frtssvlrlt iivgpfsf
//
LOCUS       XP_061011393             820 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein phosphatase 4 regulatory subunit 3B
            isoform X1 [Dama dama].
ACCESSION   XP_061011393
VERSION     XP_061011393.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155410.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..820
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..820
                     /product="serine/threonine-protein phosphatase 4
                     regulatory subunit 3B isoform X1"
                     /calculated_mol_wt=93825
     Region          7..>65
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          168..359
                     /region_name="PP4R3"
                     /note="Phosphatase 4 regulatory subunit 3; pfam04802"
                     /db_xref="CDD:461435"
     CDS             1..820
                     /gene="PPP4R3B"
                     /coded_by="XM_061155410.1:201..2663"
                     /db_xref="GeneID:133064886"
ORIGIN      
        1 msdtrrrvkv ytlnedrqwd drgtghvsst yveelkgmsl lvraesdgsl lleskinpnt
       61 ayqkqqdtli vwseaenydl alsfqekagc deiwekicqv qgkdpsvevt qdlideseee
      121 rfeempetsh lidlptceln kleeiadlvt svlsspirre klalaleneg yikkllqlfq
      181 acenlenteg lhhlyeiirg ilflnkatlf evmfsdecim dvvgcleydp alaqpkrhre
      241 fltktakfke vipitdselr qkihqtyrvq yiqdiilptp svfeenflst ltsfiffnkv
      301 eivsmlqede kflsevfaql tdeatdddkr relvnffkef cafsqtlqpq nrdaffktla
      361 klgilpalei vmgmddlqvr saatdifsyl vefspsmvre fvmqeaqqsd ddillinvvi
      421 eqmicdtdpe lggavqlmgl lrtlidpenm lattnkteks eflnffynhc mhvltapllt
      481 ntsedrrekd nivgsnksst icpdnyqtaq llalilellt fcvehhtyhi knyimnkdll
      541 rrvlvlmnsk htflalcalr fmrriiglkd efynryitkg nlfepvvnal ldngtrynll
      601 nsavielfef irvedikslt ahivenfyka lesieyvqtf kglktkyeqe kdrqnqklns
      661 vpsilrsnrf rrdakaleed eemwfnedde eegktvvapv ekskteddfp dsyekfmetk
      721 kakesedken lpkrtssggf kftfshstsa angtnstnsk sgvaqtppas sngssskttn
      781 latsvtaskg slvglvdypd deeeeeeeet sprkrprlgs
//
LOCUS       XP_061011394             813 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein phosphatase 4 regulatory subunit 3B
            isoform X2 [Dama dama].
ACCESSION   XP_061011394
VERSION     XP_061011394.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155411.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..813
                     /product="serine/threonine-protein phosphatase 4
                     regulatory subunit 3B isoform X2"
                     /calculated_mol_wt=93073
     Region          7..>65
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          168..359
                     /region_name="PP4R3"
                     /note="Phosphatase 4 regulatory subunit 3; pfam04802"
                     /db_xref="CDD:461435"
     CDS             1..813
                     /gene="PPP4R3B"
                     /coded_by="XM_061155411.1:202..2643"
                     /db_xref="GeneID:133064886"
ORIGIN      
        1 msdtrrrvkv ytlnedrqwd drgtghvsst yveelkgmsl lvraesdgsl lleskinpnt
       61 ayqkqqdtli vwseaenydl alsfqekagc deiwekicqv qgkdpsvevt qdlideseee
      121 rfeempetsh lidlptceln kleeiadlvt svlsspirre klalaleneg yikkllqlfq
      181 acenlenteg lhhlyeiirg ilflnkatlf evmfsdecim dvvgcleydp alaqpkrhre
      241 fltktakfke vipitdselr qkihqtyrvq yiqdiilptp svfeenflst ltsfiffnkv
      301 eivsmlqede kflsevfaql tdeatdddkr relvnffkef cafsqtlqpq nrdaffktla
      361 klgilpalei vmgmddlqvr saatdifsyl vefspsmvre fvmqeaqqsd ddillinvvi
      421 eqmicdtdpe lggavqlmgl lrtlidpenm lattnkteks eflnffynhc mhvltapllt
      481 ntsedrrekd nivgsnksst icpdnyqtaq llalilellt fcvehhtyhi knyimnkdll
      541 rrvlvlmnsk htflalcalr fmrriiglkd efynryitkg nlfepvvnal ldngtrynll
      601 nsavielfef irvedikslt ahivenfyka lesieyvqtf kglktkyeqe kdrqnqklns
      661 nrfrrdakal eedeemwfne ddeeegktvv apvekskted dfpdsyekfm etkkakesed
      721 kenlpkrtss ggfkftfshs tsaangtnst nsksgvaqtp passngsssk ttnlatsvta
      781 skgslvglvd ypddeeeeee eetsprkrpr lgs
//
LOCUS       XP_061011395             784 aa            linear   MAM 02-DEC-2023
DEFINITION  polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform
            X1 [Dama dama].
ACCESSION   XP_061011395
VERSION     XP_061011395.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155412.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..784
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..784
                     /product="polyribonucleotide nucleotidyltransferase 1,
                     mitochondrial isoform X1"
                     /calculated_mol_wt=85892
     Region          49..751
                     /region_name="Pnp"
                     /note="Polyribonucleotide nucleotidyltransferase
                     (polynucleotide phosphorylase) [Translation, ribosomal
                     structure and biogenesis]; COG1185"
                     /db_xref="CDD:440798"
     CDS             1..784
                     /gene="PNPT1"
                     /coded_by="XM_061155412.1:25..2379"
                     /db_xref="GeneID:133064887"
ORIGIN      
        1 maacrhccsc lrlrplgdgp lrlpgrdril tqlqvralwg gtgqrsvavd lgsrkleiss
       61 gklarfadgs avvqsgdtav mvtavsktkp spsqfmplvv dyrqkaaaag riptnylrre
      121 igssdkeilt srvidrsirp lfpagyfydt qilcnllavd gvnepdvlai ngasvalsls
      181 dipwngpiga vrigmidgec vvnptrkema nstlnlvvtg apksqivmle asaenilqqd
      241 fchaikvgvk htqqiiqgiq qlvkengvtk rtpqklfvps peivkhahkl ameklytvft
      301 dhehdkisrd eavnkirldt eeqlkekfpe vdsyeiiesf nvatkdvfrs iilneykrcd
      361 grdltslrni ncevdmfkil hgsslfqrgq tqvlctvtfd slesnfksdr iitaingikd
      421 knfmlhyefp pyatneigkv tgvnrrelgh galaeralyp vipkdfpfti rvtsevlesn
      481 gsssmasacg gslalmdagv pissavagva iglvtknnpd kgeiedyrll tdilgiedyh
      541 gdmdfkiagt skgitalqad iklpgipiki vmeaiqqasv akkeilqimn ktiskprasr
      601 kengpvvetv qvplskrakf vgpggyhlkk lqaetgvtis qvdeetfsif aptpsamhea
      661 rdfitdickd dqeqqlefga vytatiteir dtgvmvklyp nmtavllhnt qldqrkikhp
      721 salglevgqe iqvkyfgrdp adgrmrlsrk vlqspattvv ktlndrssiv mgesvsqsss
      781 nssr
//
LOCUS       XP_061011396             745 aa            linear   MAM 02-DEC-2023
DEFINITION  polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform
            X2 [Dama dama].
ACCESSION   XP_061011396
VERSION     XP_061011396.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155413.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..745
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..745
                     /product="polyribonucleotide nucleotidyltransferase 1,
                     mitochondrial isoform X2"
                     /calculated_mol_wt=82209
     Region          37..712
                     /region_name="Pnp"
                     /note="Polyribonucleotide nucleotidyltransferase
                     (polynucleotide phosphorylase) [Translation, ribosomal
                     structure and biogenesis]; COG1185"
                     /db_xref="CDD:440798"
     CDS             1..745
                     /gene="PNPT1"
                     /coded_by="XM_061155413.1:138..2375"
                     /db_xref="GeneID:133064887"
ORIGIN      
        1 mgwhrtairg rgfrqqktrn ilwktsqicr wlccgtgdta vmvtavsktk pspsqfmplv
       61 vdyrqkaaaa griptnylrr eigssdkeil tsrvidrsir plfpagyfyd tqilcnllav
      121 dgvnepdvla ingasvalsl sdipwngpig avrigmidge cvvnptrkem anstlnlvvt
      181 gapksqivml easaenilqq dfchaikvgv khtqqiiqgi qqlvkengvt krtpqklfvp
      241 speivkhahk lameklytvf tdhehdkisr deavnkirld teeqlkekfp evdsyeiies
      301 fnvatkdvfr siilneykrc dgrdltslrn incevdmfki lhgsslfqrg qtqvlctvtf
      361 dslesnfksd riitaingik dknfmlhyef ppyatneigk vtgvnrrelg hgalaeraly
      421 pvipkdfpft irvtsevles ngsssmasac ggslalmdag vpissavagv aiglvtknnp
      481 dkgeiedyrl ltdilgiedy hgdmdfkiag tskgitalqa diklpgipik ivmeaiqqas
      541 vakkeilqim nktiskpras rkengpvvet vqvplskrak fvgpggyhlk klqaetgvti
      601 sqvdeetfsi faptpsamhe ardfitdick ddqeqqlefg avytatitei rdtgvmvkly
      661 pnmtavllhn tqldqrkikh psalglevgq eiqvkyfgrd padgrmrlsr kvlqspattv
      721 vktlndrssi vmgesvsqss snssr
//
LOCUS       XP_061011397             343 aa            linear   MAM 02-DEC-2023
DEFINITION  cilia- and flagella-associated protein 36 isoform X1 [Dama dama].
ACCESSION   XP_061011397
VERSION     XP_061011397.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155414.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..343
                     /product="cilia- and flagella-associated protein 36
                     isoform X1"
                     /calculated_mol_wt=39502
     Region          15..122
                     /region_name="ARL2_Bind_BART"
                     /note="The ARF-like 2 binding protein BART; pfam11527"
                     /db_xref="CDD:463288"
     CDS             1..343
                     /gene="CFAP36"
                     /coded_by="XM_061155414.1:204..1235"
                     /db_xref="GeneID:133064889"
ORIGIN      
        1 maaeeedeve wvvesiagfl rgpdwsipil dfveqkcevf ddeeesklty teihqeykel
       61 veklletylk eiginedqfq eactsplakt rtsqailqpv laaedftifk ammvqkntem
      121 qlqairiiqe rngvlpdclt dgsdvvsdle qeemkilkev lrkskeeydq eeerkrkkql
      181 seakteepsm qanettkmnn sqgdgehfah ptsevkvhfa nqsvqpstrk lemlpetscl
      241 phkglkipgf ehasmegpia nlstlgteel rqrehylkqk rdklmamrkd mktkqnqtse
      301 qkgkpareve emtekpemta eekqtllkrr llaeklkeev ink
//
LOCUS       XP_061011398             333 aa            linear   MAM 02-DEC-2023
DEFINITION  cilia- and flagella-associated protein 36 isoform X2 [Dama dama].
ACCESSION   XP_061011398
VERSION     XP_061011398.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155415.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..333
                     /product="cilia- and flagella-associated protein 36
                     isoform X2"
                     /calculated_mol_wt=38362
     Region          15..122
                     /region_name="ARL2_Bind_BART"
                     /note="The ARF-like 2 binding protein BART; pfam11527"
                     /db_xref="CDD:463288"
     CDS             1..333
                     /gene="CFAP36"
                     /coded_by="XM_061155415.1:206..1207"
                     /db_xref="GeneID:133064889"
ORIGIN      
        1 maaeeedeve wvvesiagfl rgpdwsipil dfveqkcevf ddeeesklty teihqeykel
       61 veklletylk eiginedqfq eactsplakt rtsqailqpv laaedftifk ammvqkntem
      121 qlqairiiqe rngvlpdclt dgsdvvsdle qeemkilkev lrkskeeydq eeerkrkkql
      181 seakteepsm qanettkmnn sqgdgehfah ptsvqpstrk lemlpetscl phkglkipgf
      241 ehasmegpia nlstlgteel rqrehylkqk rdklmamrkd mktkqnqtse qkgkpareve
      301 emtekpemta eekqtllkrr llaeklkeev ink
//
LOCUS       XP_061011399            1870 aa            linear   MAM 02-DEC-2023
DEFINITION  girdin isoform X1 [Dama dama].
ACCESSION   XP_061011399
VERSION     XP_061011399.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155416.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1870
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1870
                     /product="girdin isoform X1"
                     /calculated_mol_wt=215603
     Region          10..165
                     /region_name="HkD_Girdin"
                     /note="Hook domain found in Girdin and similar proteins;
                     cd22229"
                     /db_xref="CDD:411800"
     Site            order(133,139,142..143,145,150,153..154,156..157,160..161,
                     164)
                     /site_type="other"
                     /note="putative LIC-binding interface [polypeptide
                     binding]"
                     /db_xref="CDD:411800"
     Region          <181..814
                     /region_name="PRK03918"
                     /note="DNA double-strand break repair ATPase Rad50"
                     /db_xref="CDD:235175"
     Region          596..1372
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1870
                     /gene="CCDC88A"
                     /coded_by="XM_061155416.1:784..6396"
                     /db_xref="GeneID:133064891"
ORIGIN      
        1 menevftpll eqfmtsplvt wvktfgplaa gngtnldeyv alvdgvflnq vmlqinpkse
       61 sqrvnkkvnn daslrihnls ilvrqikfyy qetlqqlimm slpnvliigk npfseqgtee
      121 vkkllllllg cavqcqkkee fieriqgldf dtkaavaahi qevthnqenv fdlqwmevtd
      181 msqeeiepll knmvlhlkrl iderdehset ivelseerdg lhflphasss aqspcgspgm
      241 krtesrqhls veladakaki rrlrqeleek teqlldckqe leqmeielkr lqqenmnlls
      301 darsarmyrd eldalrekav rvdklesevs rykerlhdie fykarveelk ednqvlletk
      361 tmledqlegt rarsdklhel ekenlqlkak lhdmemerdm drkkieelme enmtlemaqk
      421 qsmdeslhlg weleqisrts elseapqksl ghevneltss rllklemenq sltktveelr
      481 stvdsaegtt skilkieken qrlskkveil eneiiqekqs lqncqnlskd lmkekaqlek
      541 tietlrense rqikileqen ehlnqtvssl rqrsqisaea rvkdiekenk ilhesikets
      601 sklskiefek rqirkelehy kekgeraeel enelhhleke nellqkkitn lkitcekiea
      661 leqenseler enrkfkktld sfknltfqle slekensqld eenlelrrsv eslkcasmkm
      721 aqlqlenkel esekeqlkkg lelmkasfkk terlevsyqg ldtenqrlqk alensnkkiq
      781 qleselqdle menqtlqknl eelkisskrl eqlekenksl eqetsqlekd kkqlekenkr
      841 lrqqaeikdt tleennvkig nlekenktlf keigiykesc irlkeleken kelvkratid
      901 iktlvtlred lvseklktqq mnndleklth elekiglnke rllhdeqstd dryklleskl
      961 estlkkslei keekiaalea rleestnynq qlrqelktvk knyealkqrq deermvqssp
     1021 paagednkwe resqettrel lkvkdrliev ernnatlqae kqalktqlkq letqnsnlqa
     1081 qilalqrqtv alqeqnstlq tqnaklqven stlnsqstsl mnqnaqlliq qsslenenes
     1141 vikeredlks lydslvkdhe klellherqa seyetliakh gtlksahknl evehkdledr
     1201 ynqllkqkgq ledlektlkv eqekmllknk nhetvaaefk klcgendrln htynqllket
     1261 evlqtdhknl ksllnnskle qtrleaefsk lkeqyqqldi tstklnnqce llsqlkgnle
     1321 eenrhlldqi qtlmlqnrtl leqnmeskdl fhveqrqyid klnelrrqke kleekimdqy
     1381 kfydpspprr rgnwitlkmr klikskkdvn rerqksltlt ptrsdssegf lqlphqdsqd
     1441 sssvgsnsle dgqtlgtkks smvalkrlpf lrnrpkdkdk mkacyrrsms mndlvqsmvl
     1501 aggqwtgste nlevpddist gkrrkelgam afsttainfs tvnsstgfrs kqlvnnkdtt
     1561 sfedvspqgi sddsstgsrv hasrpaslds grtstsnsnn naslhevkag avniqsrpqs
     1621 hssgefsllh eheawsssgs spiqylkrqt rsspalqhrt lesrahhkik tgspgsevvt
     1681 lqqfleesnk ltsmqlkpss qenlldevmk slsvssdflg knkpvscgla rsvsgktpgd
     1741 fhdrrttkpe qfvrpgpqka edtcfmsssg kptrgaqgki kliketslsr qskdsnpyat
     1801 lprassvist aegttrrtsi hdflakdsrl pmsvdsppas adsgvtatsn vdkvqenrns
     1861 ksrsreqqss
//
LOCUS       XP_061011400            1869 aa            linear   MAM 02-DEC-2023
DEFINITION  girdin isoform X2 [Dama dama].
ACCESSION   XP_061011400
VERSION     XP_061011400.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155417.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1869
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1869
                     /product="girdin isoform X2"
                     /calculated_mol_wt=215532
     Region          10..165
                     /region_name="HkD_Girdin"
                     /note="Hook domain found in Girdin and similar proteins;
                     cd22229"
                     /db_xref="CDD:411800"
     Site            order(133,139,142..143,145,150,153..154,156..157,160..161,
                     164)
                     /site_type="other"
                     /note="putative LIC-binding interface [polypeptide
                     binding]"
                     /db_xref="CDD:411800"
     Region          <181..814
                     /region_name="PRK03918"
                     /note="DNA double-strand break repair ATPase Rad50"
                     /db_xref="CDD:235175"
     Region          596..1372
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1869
                     /gene="CCDC88A"
                     /coded_by="XM_061155417.1:784..6393"
                     /db_xref="GeneID:133064891"
ORIGIN      
        1 menevftpll eqfmtsplvt wvktfgplaa gngtnldeyv alvdgvflnq vmlqinpkse
       61 sqrvnkkvnn daslrihnls ilvrqikfyy qetlqqlimm slpnvliigk npfseqgtee
      121 vkkllllllg cavqcqkkee fieriqgldf dtkaavaahi qevthnqenv fdlqwmevtd
      181 msqeeiepll knmvlhlkrl iderdehset ivelseerdg lhflphasss aqspcgspgm
      241 krtesrqhls veladakaki rrlrqeleek teqlldckqe leqmeielkr lqqenmnlls
      301 darsarmyrd eldalrekav rvdklesevs rykerlhdie fykarveelk ednqvlletk
      361 tmledqlegt rarsdklhel ekenlqlkak lhdmemerdm drkkieelme enmtlemaqk
      421 qsmdeslhlg weleqisrts elseapqksl ghevneltss rllklemenq sltktveelr
      481 stvdsaegtt skilkieken qrlskkveil eneiiqekqs lqncqnlskd lmkekaqlek
      541 tietlrense rqikileqen ehlnqtvssl rqrsqisaea rvkdiekenk ilhesikets
      601 sklskiefek rqirkelehy kekgeraeel enelhhleke nellqkkitn lkitcekiea
      661 leqenseler enrkfkktld sfknltfqle slekensqld eenlelrrsv eslkcasmkm
      721 aqlqlenkel esekeqlkkg lelmkasfkk terlevsyqg ldtenqrlqk alensnkkiq
      781 qleselqdle menqtlqknl eelkisskrl eqlekenksl eqetsqlekd kkqlekenkr
      841 lrqqaeikdt tleennvkig nlekenktlf keigiykesc irlkeleken kelvkratid
      901 iktlvtlred lvseklktqq mnndleklth elekiglnke rllhdeqstd dryklleskl
      961 estlkkslei keekiaalea rleestnynq qlrqelktvk knyealkqrq deermvqssp
     1021 paagednkwe resqettrel lkvkdrliev ernnatlqae kqalktqlkq letqnsnlqa
     1081 qilalqrqtv alqeqnstlq tqnaklqven stlnsqstsl mnqnaqlliq qsslenenes
     1141 vikeredlks lydslvkdhe klellherqa seyetliakh gtlksahknl evehkdledr
     1201 ynqllkqkgq ledlektlkv eqekmllknk nhetvaaefk klcgendrln htynqllket
     1261 evlqtdhknl ksllnnskle qtrleaefsk lkeqyqqldi tstklnnqce llsqlkgnle
     1321 eenrhlldqi qtlmlqnrtl leqnmeskdl fhveqrqyid klnelrrqke kleekimdqy
     1381 kfydpspprr rgnwitlkmr klikskkdvn rerqksltlt ptrsdssegf lqlphqdsqd
     1441 sssvgsnsle dgqtlgtkks smvalkrlpf lrnrpkdkdk mkacyrrsms mndlvqsmvl
     1501 aggqwtgste nlevpddist gkrrkelgam afsttainfs tvnsstgfrs kqlvnnkdtt
     1561 sfedvspqgi sddsstgsrv hasrpaslds grtstsnsnn naslhevkga vniqsrpqsh
     1621 ssgefsllhe heawsssgss piqylkrqtr sspalqhrtl esrahhkikt gspgsevvtl
     1681 qqfleesnkl tsmqlkpssq enlldevmks lsvssdflgk nkpvscglar svsgktpgdf
     1741 hdrrttkpeq fvrpgpqkae dtcfmsssgk ptrgaqgkik liketslsrq skdsnpyatl
     1801 prassvista egttrrtsih dflakdsrlp msvdsppasa dsgvtatsnv dkvqenrnsk
     1861 srsreqqss
//
LOCUS       XP_061011401            1842 aa            linear   MAM 02-DEC-2023
DEFINITION  girdin isoform X3 [Dama dama].
ACCESSION   XP_061011401
VERSION     XP_061011401.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155418.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1842
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1842
                     /product="girdin isoform X3"
                     /calculated_mol_wt=212182
     Region          10..165
                     /region_name="HkD_Girdin"
                     /note="Hook domain found in Girdin and similar proteins;
                     cd22229"
                     /db_xref="CDD:411800"
     Site            order(133,139,142..143,145,150,153..154,156..157,160..161,
                     164)
                     /site_type="other"
                     /note="putative LIC-binding interface [polypeptide
                     binding]"
                     /db_xref="CDD:411800"
     Region          <181..814
                     /region_name="PRK03918"
                     /note="DNA double-strand break repair ATPase Rad50"
                     /db_xref="CDD:235175"
     Region          596..1372
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1842
                     /gene="CCDC88A"
                     /coded_by="XM_061155418.1:784..6312"
                     /db_xref="GeneID:133064891"
ORIGIN      
        1 menevftpll eqfmtsplvt wvktfgplaa gngtnldeyv alvdgvflnq vmlqinpkse
       61 sqrvnkkvnn daslrihnls ilvrqikfyy qetlqqlimm slpnvliigk npfseqgtee
      121 vkkllllllg cavqcqkkee fieriqgldf dtkaavaahi qevthnqenv fdlqwmevtd
      181 msqeeiepll knmvlhlkrl iderdehset ivelseerdg lhflphasss aqspcgspgm
      241 krtesrqhls veladakaki rrlrqeleek teqlldckqe leqmeielkr lqqenmnlls
      301 darsarmyrd eldalrekav rvdklesevs rykerlhdie fykarveelk ednqvlletk
      361 tmledqlegt rarsdklhel ekenlqlkak lhdmemerdm drkkieelme enmtlemaqk
      421 qsmdeslhlg weleqisrts elseapqksl ghevneltss rllklemenq sltktveelr
      481 stvdsaegtt skilkieken qrlskkveil eneiiqekqs lqncqnlskd lmkekaqlek
      541 tietlrense rqikileqen ehlnqtvssl rqrsqisaea rvkdiekenk ilhesikets
      601 sklskiefek rqirkelehy kekgeraeel enelhhleke nellqkkitn lkitcekiea
      661 leqenseler enrkfkktld sfknltfqle slekensqld eenlelrrsv eslkcasmkm
      721 aqlqlenkel esekeqlkkg lelmkasfkk terlevsyqg ldtenqrlqk alensnkkiq
      781 qleselqdle menqtlqknl eelkisskrl eqlekenksl eqetsqlekd kkqlekenkr
      841 lrqqaeikdt tleennvkig nlekenktlf keigiykesc irlkeleken kelvkratid
      901 iktlvtlred lvseklktqq mnndleklth elekiglnke rllhdeqstd dryklleskl
      961 estlkkslei keekiaalea rleestnynq qlrqelktvk knyealkqrq deermvqssp
     1021 paagednkwe resqettrel lkvkdrliev ernnatlqae kqalktqlkq letqnsnlqa
     1081 qilalqrqtv alqeqnstlq tqnaklqven stlnsqstsl mnqnaqlliq qsslenenes
     1141 vikeredlks lydslvkdhe klellherqa seyetliakh gtlksahknl evehkdledr
     1201 ynqllkqkgq ledlektlkv eqekmllknk nhetvaaefk klcgendrln htynqllket
     1261 evlqtdhknl ksllnnskle qtrleaefsk lkeqyqqldi tstklnnqce llsqlkgnle
     1321 eenrhlldqi qtlmlqnrtl leqnmeskdl fhveqrqyid klnelrrqke kleekimdqy
     1381 kfydpspprr rgnwitlkmr klikskkdvn rerqksltlt ptrsdssegf lqlphqdsqd
     1441 sssvgsnsle dgqtlgtkks stmndlvqsm vlaggqwtgs tenlevpddi stgkrrkelg
     1501 amafsttain fstvnsstgf rskqlvnnkd ttsfedvspq gisddsstgs rvhasrpasl
     1561 dsgrtstsns nnnaslhevk agavniqsrp qshssgefsl lheheawsss gsspiqylkr
     1621 qtrsspalqh rtlesrahhk iktgspgsev vtlqqflees nkltsmqlkp ssqenlldev
     1681 mkslsvssdf lgknkpvscg larsvsgktp gdfhdrrttk peqfvrpgpq kaedtcfmss
     1741 sgkptrgaqg kikliketsl srqskdsnpy atlprassvi staegttrrt sihdflakds
     1801 rlpmsvdspp asadsgvtat snvdkvqenr nsksrsreqq ss
//
LOCUS       XP_061011402             727 aa            linear   MAM 02-DEC-2023
DEFINITION  translation initiation factor IF-2, mitochondrial isoform X1 [Dama
            dama].
ACCESSION   XP_061011402
VERSION     XP_061011402.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155419.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..727
                     /product="translation initiation factor IF-2,
                     mitochondrial isoform X1"
                     /calculated_mol_wt=81537
     Region          177..720
                     /region_name="InfB"
                     /note="Translation initiation factor IF-2, a GTPase
                     [Translation, ribosomal structure and biogenesis];
                     COG0532"
                     /db_xref="CDD:440298"
     CDS             1..727
                     /gene="MTIF2"
                     /coded_by="XM_061155419.1:962..3145"
                     /db_xref="GeneID:133064892"
ORIGIN      
        1 mnrkilklen llrfhticrq lhslcqrrml aqwrhmfssa yavqtsqlyi rpwqtdglir
       61 aalsqrrllv tkkekrsqks plpstkskke vevwlgmtve elaramekdv dsvyeslmnt
      121 aididsleth shldevwike vikksgmklk wsklkqdkvr enkdavkrpq adpalliprs
      181 pvvtimghvd hgkttlldkl rktqvaamea ggitqhigaf lvslpsgeki tfldtpghaa
      241 fsamrargar vtdivilvva addgvmkqtv esiqhakdah vpivlainkc dkaeadpekv
      301 kkellaydvv cedyggdvqa vhvsaltgen mmglaeatia laemlelkad ptgavegtvi
      361 esftdkgrgp vttaiiqrgt lrkgsilvag kswakvrlmf dengravnea ypsmpvgitg
      421 wrdlpsagde ilevesepra revvdwrkye qeqeknkedl klieekrkeh qeahrkdrek
      481 ygtlhwkers yikykekrqq qplklkekle rdsnvlpiiv kgdvdgsvea ilnimdtyda
      541 shecelelvh fgvgdisend vnlaetfhgv iygfnvnagn viqqsaakkg vkiklhkviy
      601 rliedlqeel ssrlpcivee hpvgeasila tfsitegkkk vpvagcrvqk gqiekqkkfk
      661 lirnghviwk gslislkhhk ddtsvvktgm dcglsldeek iefkvgdaiv cyeekevpak
      721 tswdpgf
//
LOCUS       XP_061011403             727 aa            linear   MAM 02-DEC-2023
DEFINITION  translation initiation factor IF-2, mitochondrial isoform X1 [Dama
            dama].
ACCESSION   XP_061011403
VERSION     XP_061011403.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155420.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..727
                     /product="translation initiation factor IF-2,
                     mitochondrial isoform X1"
                     /calculated_mol_wt=81537
     Region          177..720
                     /region_name="InfB"
                     /note="Translation initiation factor IF-2, a GTPase
                     [Translation, ribosomal structure and biogenesis];
                     COG0532"
                     /db_xref="CDD:440298"
     CDS             1..727
                     /gene="MTIF2"
                     /coded_by="XM_061155420.1:869..3052"
                     /db_xref="GeneID:133064892"
ORIGIN      
        1 mnrkilklen llrfhticrq lhslcqrrml aqwrhmfssa yavqtsqlyi rpwqtdglir
       61 aalsqrrllv tkkekrsqks plpstkskke vevwlgmtve elaramekdv dsvyeslmnt
      121 aididsleth shldevwike vikksgmklk wsklkqdkvr enkdavkrpq adpalliprs
      181 pvvtimghvd hgkttlldkl rktqvaamea ggitqhigaf lvslpsgeki tfldtpghaa
      241 fsamrargar vtdivilvva addgvmkqtv esiqhakdah vpivlainkc dkaeadpekv
      301 kkellaydvv cedyggdvqa vhvsaltgen mmglaeatia laemlelkad ptgavegtvi
      361 esftdkgrgp vttaiiqrgt lrkgsilvag kswakvrlmf dengravnea ypsmpvgitg
      421 wrdlpsagde ilevesepra revvdwrkye qeqeknkedl klieekrkeh qeahrkdrek
      481 ygtlhwkers yikykekrqq qplklkekle rdsnvlpiiv kgdvdgsvea ilnimdtyda
      541 shecelelvh fgvgdisend vnlaetfhgv iygfnvnagn viqqsaakkg vkiklhkviy
      601 rliedlqeel ssrlpcivee hpvgeasila tfsitegkkk vpvagcrvqk gqiekqkkfk
      661 lirnghviwk gslislkhhk ddtsvvktgm dcglsldeek iefkvgdaiv cyeekevpak
      721 tswdpgf
//
LOCUS       XP_061011404             727 aa            linear   MAM 02-DEC-2023
DEFINITION  translation initiation factor IF-2, mitochondrial isoform X1 [Dama
            dama].
ACCESSION   XP_061011404
VERSION     XP_061011404.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155421.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..727
                     /product="translation initiation factor IF-2,
                     mitochondrial isoform X1"
                     /calculated_mol_wt=81537
     Region          177..720
                     /region_name="InfB"
                     /note="Translation initiation factor IF-2, a GTPase
                     [Translation, ribosomal structure and biogenesis];
                     COG0532"
                     /db_xref="CDD:440298"
     CDS             1..727
                     /gene="MTIF2"
                     /coded_by="XM_061155421.1:852..3035"
                     /db_xref="GeneID:133064892"
ORIGIN      
        1 mnrkilklen llrfhticrq lhslcqrrml aqwrhmfssa yavqtsqlyi rpwqtdglir
       61 aalsqrrllv tkkekrsqks plpstkskke vevwlgmtve elaramekdv dsvyeslmnt
      121 aididsleth shldevwike vikksgmklk wsklkqdkvr enkdavkrpq adpalliprs
      181 pvvtimghvd hgkttlldkl rktqvaamea ggitqhigaf lvslpsgeki tfldtpghaa
      241 fsamrargar vtdivilvva addgvmkqtv esiqhakdah vpivlainkc dkaeadpekv
      301 kkellaydvv cedyggdvqa vhvsaltgen mmglaeatia laemlelkad ptgavegtvi
      361 esftdkgrgp vttaiiqrgt lrkgsilvag kswakvrlmf dengravnea ypsmpvgitg
      421 wrdlpsagde ilevesepra revvdwrkye qeqeknkedl klieekrkeh qeahrkdrek
      481 ygtlhwkers yikykekrqq qplklkekle rdsnvlpiiv kgdvdgsvea ilnimdtyda
      541 shecelelvh fgvgdisend vnlaetfhgv iygfnvnagn viqqsaakkg vkiklhkviy
      601 rliedlqeel ssrlpcivee hpvgeasila tfsitegkkk vpvagcrvqk gqiekqkkfk
      661 lirnghviwk gslislkhhk ddtsvvktgm dcglsldeek iefkvgdaiv cyeekevpak
      721 tswdpgf
//
LOCUS       XP_061011405             727 aa            linear   MAM 02-DEC-2023
DEFINITION  translation initiation factor IF-2, mitochondrial isoform X1 [Dama
            dama].
ACCESSION   XP_061011405
VERSION     XP_061011405.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155422.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..727
                     /product="translation initiation factor IF-2,
                     mitochondrial isoform X1"
                     /calculated_mol_wt=81537
     Region          177..720
                     /region_name="InfB"
                     /note="Translation initiation factor IF-2, a GTPase
                     [Translation, ribosomal structure and biogenesis];
                     COG0532"
                     /db_xref="CDD:440298"
     CDS             1..727
                     /gene="MTIF2"
                     /coded_by="XM_061155422.1:524..2707"
                     /db_xref="GeneID:133064892"
ORIGIN      
        1 mnrkilklen llrfhticrq lhslcqrrml aqwrhmfssa yavqtsqlyi rpwqtdglir
       61 aalsqrrllv tkkekrsqks plpstkskke vevwlgmtve elaramekdv dsvyeslmnt
      121 aididsleth shldevwike vikksgmklk wsklkqdkvr enkdavkrpq adpalliprs
      181 pvvtimghvd hgkttlldkl rktqvaamea ggitqhigaf lvslpsgeki tfldtpghaa
      241 fsamrargar vtdivilvva addgvmkqtv esiqhakdah vpivlainkc dkaeadpekv
      301 kkellaydvv cedyggdvqa vhvsaltgen mmglaeatia laemlelkad ptgavegtvi
      361 esftdkgrgp vttaiiqrgt lrkgsilvag kswakvrlmf dengravnea ypsmpvgitg
      421 wrdlpsagde ilevesepra revvdwrkye qeqeknkedl klieekrkeh qeahrkdrek
      481 ygtlhwkers yikykekrqq qplklkekle rdsnvlpiiv kgdvdgsvea ilnimdtyda
      541 shecelelvh fgvgdisend vnlaetfhgv iygfnvnagn viqqsaakkg vkiklhkviy
      601 rliedlqeel ssrlpcivee hpvgeasila tfsitegkkk vpvagcrvqk gqiekqkkfk
      661 lirnghviwk gslislkhhk ddtsvvktgm dcglsldeek iefkvgdaiv cyeekevpak
      721 tswdpgf
//
LOCUS       XP_061011406             727 aa            linear   MAM 02-DEC-2023
DEFINITION  translation initiation factor IF-2, mitochondrial isoform X1 [Dama
            dama].
ACCESSION   XP_061011406
VERSION     XP_061011406.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155423.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..727
                     /product="translation initiation factor IF-2,
                     mitochondrial isoform X1"
                     /calculated_mol_wt=81537
     Region          177..720
                     /region_name="InfB"
                     /note="Translation initiation factor IF-2, a GTPase
                     [Translation, ribosomal structure and biogenesis];
                     COG0532"
                     /db_xref="CDD:440298"
     CDS             1..727
                     /gene="MTIF2"
                     /coded_by="XM_061155423.1:372..2555"
                     /db_xref="GeneID:133064892"
ORIGIN      
        1 mnrkilklen llrfhticrq lhslcqrrml aqwrhmfssa yavqtsqlyi rpwqtdglir
       61 aalsqrrllv tkkekrsqks plpstkskke vevwlgmtve elaramekdv dsvyeslmnt
      121 aididsleth shldevwike vikksgmklk wsklkqdkvr enkdavkrpq adpalliprs
      181 pvvtimghvd hgkttlldkl rktqvaamea ggitqhigaf lvslpsgeki tfldtpghaa
      241 fsamrargar vtdivilvva addgvmkqtv esiqhakdah vpivlainkc dkaeadpekv
      301 kkellaydvv cedyggdvqa vhvsaltgen mmglaeatia laemlelkad ptgavegtvi
      361 esftdkgrgp vttaiiqrgt lrkgsilvag kswakvrlmf dengravnea ypsmpvgitg
      421 wrdlpsagde ilevesepra revvdwrkye qeqeknkedl klieekrkeh qeahrkdrek
      481 ygtlhwkers yikykekrqq qplklkekle rdsnvlpiiv kgdvdgsvea ilnimdtyda
      541 shecelelvh fgvgdisend vnlaetfhgv iygfnvnagn viqqsaakkg vkiklhkviy
      601 rliedlqeel ssrlpcivee hpvgeasila tfsitegkkk vpvagcrvqk gqiekqkkfk
      661 lirnghviwk gslislkhhk ddtsvvktgm dcglsldeek iefkvgdaiv cyeekevpak
      721 tswdpgf
//
LOCUS       XP_061011407             727 aa            linear   MAM 02-DEC-2023
DEFINITION  translation initiation factor IF-2, mitochondrial isoform X1 [Dama
            dama].
ACCESSION   XP_061011407
VERSION     XP_061011407.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155424.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..727
                     /product="translation initiation factor IF-2,
                     mitochondrial isoform X1"
                     /calculated_mol_wt=81537
     Region          177..720
                     /region_name="InfB"
                     /note="Translation initiation factor IF-2, a GTPase
                     [Translation, ribosomal structure and biogenesis];
                     COG0532"
                     /db_xref="CDD:440298"
     CDS             1..727
                     /gene="MTIF2"
                     /coded_by="XM_061155424.1:218..2401"
                     /db_xref="GeneID:133064892"
ORIGIN      
        1 mnrkilklen llrfhticrq lhslcqrrml aqwrhmfssa yavqtsqlyi rpwqtdglir
       61 aalsqrrllv tkkekrsqks plpstkskke vevwlgmtve elaramekdv dsvyeslmnt
      121 aididsleth shldevwike vikksgmklk wsklkqdkvr enkdavkrpq adpalliprs
      181 pvvtimghvd hgkttlldkl rktqvaamea ggitqhigaf lvslpsgeki tfldtpghaa
      241 fsamrargar vtdivilvva addgvmkqtv esiqhakdah vpivlainkc dkaeadpekv
      301 kkellaydvv cedyggdvqa vhvsaltgen mmglaeatia laemlelkad ptgavegtvi
      361 esftdkgrgp vttaiiqrgt lrkgsilvag kswakvrlmf dengravnea ypsmpvgitg
      421 wrdlpsagde ilevesepra revvdwrkye qeqeknkedl klieekrkeh qeahrkdrek
      481 ygtlhwkers yikykekrqq qplklkekle rdsnvlpiiv kgdvdgsvea ilnimdtyda
      541 shecelelvh fgvgdisend vnlaetfhgv iygfnvnagn viqqsaakkg vkiklhkviy
      601 rliedlqeel ssrlpcivee hpvgeasila tfsitegkkk vpvagcrvqk gqiekqkkfk
      661 lirnghviwk gslislkhhk ddtsvvktgm dcglsldeek iefkvgdaiv cyeekevpak
      721 tswdpgf
//
LOCUS       XP_061011408             727 aa            linear   MAM 02-DEC-2023
DEFINITION  translation initiation factor IF-2, mitochondrial isoform X1 [Dama
            dama].
ACCESSION   XP_061011408
VERSION     XP_061011408.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155425.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..727
                     /product="translation initiation factor IF-2,
                     mitochondrial isoform X1"
                     /calculated_mol_wt=81537
     Region          177..720
                     /region_name="InfB"
                     /note="Translation initiation factor IF-2, a GTPase
                     [Translation, ribosomal structure and biogenesis];
                     COG0532"
                     /db_xref="CDD:440298"
     CDS             1..727
                     /gene="MTIF2"
                     /coded_by="XM_061155425.1:75..2258"
                     /db_xref="GeneID:133064892"
ORIGIN      
        1 mnrkilklen llrfhticrq lhslcqrrml aqwrhmfssa yavqtsqlyi rpwqtdglir
       61 aalsqrrllv tkkekrsqks plpstkskke vevwlgmtve elaramekdv dsvyeslmnt
      121 aididsleth shldevwike vikksgmklk wsklkqdkvr enkdavkrpq adpalliprs
      181 pvvtimghvd hgkttlldkl rktqvaamea ggitqhigaf lvslpsgeki tfldtpghaa
      241 fsamrargar vtdivilvva addgvmkqtv esiqhakdah vpivlainkc dkaeadpekv
      301 kkellaydvv cedyggdvqa vhvsaltgen mmglaeatia laemlelkad ptgavegtvi
      361 esftdkgrgp vttaiiqrgt lrkgsilvag kswakvrlmf dengravnea ypsmpvgitg
      421 wrdlpsagde ilevesepra revvdwrkye qeqeknkedl klieekrkeh qeahrkdrek
      481 ygtlhwkers yikykekrqq qplklkekle rdsnvlpiiv kgdvdgsvea ilnimdtyda
      541 shecelelvh fgvgdisend vnlaetfhgv iygfnvnagn viqqsaakkg vkiklhkviy
      601 rliedlqeel ssrlpcivee hpvgeasila tfsitegkkk vpvagcrvqk gqiekqkkfk
      661 lirnghviwk gslislkhhk ddtsvvktgm dcglsldeek iefkvgdaiv cyeekevpak
      721 tswdpgf
//
LOCUS       XP_061011409             616 aa            linear   MAM 02-DEC-2023
DEFINITION  translation initiation factor IF-2, mitochondrial isoform X2 [Dama
            dama].
ACCESSION   XP_061011409
VERSION     XP_061011409.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155426.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..616
                     /product="translation initiation factor IF-2,
                     mitochondrial isoform X2"
                     /calculated_mol_wt=69143
     Region          115..609
                     /region_name="InfB"
                     /note="Translation initiation factor IF-2, a GTPase
                     [Translation, ribosomal structure and biogenesis];
                     COG0532"
                     /db_xref="CDD:440298"
     CDS             1..616
                     /gene="MTIF2"
                     /coded_by="XM_061155426.1:1098..2948"
                     /db_xref="GeneID:133064892"
ORIGIN      
        1 mnrkilklen llrfhticrq lhslcqrrml aqwrhmfssa yavqtsqlyi rpwqtdglir
       61 aalsqrrllv tkkekrsqks plpstkskke vevwlgmtve elaramekdv vslpsgekit
      121 fldtpghaaf samrargarv tdivilvvaa ddgvmkqtve siqhakdahv pivlainkcd
      181 kaeadpekvk kellaydvvc edyggdvqav hvsaltgenm mglaeatial aemlelkadp
      241 tgavegtvie sftdkgrgpv ttaiiqrgtl rkgsilvagk swakvrlmfd engravneay
      301 psmpvgitgw rdlpsagdei leveseprar evvdwrkyeq eqeknkedlk lieekrkehq
      361 eahrkdreky gtlhwkersy ikykekrqqq plklkekler dsnvlpiivk gdvdgsveai
      421 lnimdtydas hecelelvhf gvgdisendv nlaetfhgvi ygfnvnagnv iqqsaakkgv
      481 kiklhkviyr liedlqeels srlpciveeh pvgeasilat fsitegkkkv pvagcrvqkg
      541 qiekqkkfkl irnghviwkg slislkhhkd dtsvvktgmd cglsldeeki efkvgdaivc
      601 yeekevpakt swdpgf
//
LOCUS       XP_061011410             610 aa            linear   MAM 02-DEC-2023
DEFINITION  translation initiation factor IF-2, mitochondrial isoform X3 [Dama
            dama].
ACCESSION   XP_061011410
VERSION     XP_061011410.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155427.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..610
                     /product="translation initiation factor IF-2,
                     mitochondrial isoform X3"
                     /calculated_mol_wt=67709
     Region          60..603
                     /region_name="InfB"
                     /note="Translation initiation factor IF-2, a GTPase
                     [Translation, ribosomal structure and biogenesis];
                     COG0532"
                     /db_xref="CDD:440298"
     CDS             1..610
                     /gene="MTIF2"
                     /coded_by="XM_061155427.1:129..1961"
                     /db_xref="GeneID:133064892"
ORIGIN      
        1 mntaididsl ethshldevw ikevikksgm klkwsklkqd kvrenkdavk rpqadpalli
       61 prspvvtimg hvdhgkttll dklrktqvaa meaggitqhi gaflvslpsg ekitfldtpg
      121 haafsamrar garvtdivil vvaaddgvmk qtvesiqhak dahvpivlai nkcdkaeadp
      181 ekvkkellay dvvcedyggd vqavhvsalt genmmglaea tialaemlel kadptgaveg
      241 tviesftdkg rgpvttaiiq rgtlrkgsil vagkswakvr lmfdengrav neaypsmpvg
      301 itgwrdlpsa gdeilevese prarevvdwr kyeqeqeknk edlklieekr kehqeahrkd
      361 rekygtlhwk ersyikykek rqqqplklke klerdsnvlp iivkgdvdgs veailnimdt
      421 ydashecele lvhfgvgdis endvnlaetf hgviygfnvn agnviqqsaa kkgvkiklhk
      481 viyrliedlq eelssrlpci veehpvgeas ilatfsiteg kkkvpvagcr vqkgqiekqk
      541 kfklirnghv iwkgslislk hhkddtsvvk tgmdcglsld eekiefkvgd aivcyeekev
      601 paktswdpgf
//
LOCUS       XP_061011411             171 aa            linear   MAM 02-DEC-2023
DEFINITION  prolyl-tRNA synthetase associated domain-containing protein 1 [Dama
            dama].
ACCESSION   XP_061011411
VERSION     XP_061011411.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155428.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..171
                     /product="prolyl-tRNA synthetase associated
                     domain-containing protein 1"
                     /calculated_mol_wt=18867
     Region          7..166
                     /region_name="PrdX_deacylase"
                     /note="This CD includes bacterial (Agrobacterium
                     tumefaciens and Caulobacter crescentus ProX, and
                     Clostridium sticklandii PrdX) and eukaryotic (Plasmodium
                     falciparum N-terminal ProRS editing domain) sequences. The
                     C. sticklandii PrdX protein, a homolog of the...; cd04335"
                     /db_xref="CDD:239827"
     Site            order(48,104..105,137)
                     /site_type="active"
                     /note="putative deacylase active site [active]"
                     /db_xref="CDD:239827"
     CDS             1..171
                     /gene="LOC133064894"
                     /coded_by="XM_061155428.1:73..588"
                     /db_xref="GeneID:133064894"
ORIGIN      
        1 magaelraal eqrlaalair tevvehpevf tveemmphiq hlkgahsknl flkdkkkkgy
       61 wlvtvlhdrq inlndlakql gvgsgnlrfa deaamleklk vgqgcatpla lfcddgdvkf
      121 vldsaflegg yekvyfhpmt naatmglspe dfltfvkntg hdpiilnfdk n
//
LOCUS       XP_061011412             156 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin-ribosomal protein eS31 fusion protein [Dama dama].
ACCESSION   XP_061011412
VERSION     XP_061011412.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155429.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..156
                     /product="ubiquitin-ribosomal protein eS31 fusion protein"
                     /calculated_mol_wt=17834
     Region          1..76
                     /region_name="Ubl_ubiquitin"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin;
                     cd01803"
                     /db_xref="CDD:340501"
     Site            order(6..9,11,34..37,40,42,44,46..49,68..76)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:340501"
     Site            order(8..12,31..35,40,42,44,46..49,68,70..76)
                     /site_type="other"
                     /note="E1 interaction site [polypeptide binding]"
                     /db_xref="CDD:340501"
     Region          103..147
                     /region_name="Ribosomal_S27"
                     /note="Ribosomal protein S27a; pfam01599"
                     /db_xref="CDD:460261"
     CDS             1..156
                     /gene="RPS27A"
                     /coded_by="XM_061155429.1:140..610"
                     /db_xref="GeneID:133064895"
ORIGIN      
        1 mqifvktltg ktitleveps dtienvkaki qdkegippdq qrlifagkql edgrtlsdyn
       61 iqkestlhlv lrlrggakkr kkksyttpkk nkhkrkkvkl avlkyykvde ngkisrlrre
      121 cpsdecgagv fmashfdrhy cgkccltycf nkpedk
//
LOCUS       XP_061011413            1958 aa            linear   MAM 02-DEC-2023
DEFINITION  echinoderm microtubule-associated protein-like 6 [Dama dama].
ACCESSION   XP_061011413
VERSION     XP_061011413.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155430.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1958
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1958
                     /product="echinoderm microtubule-associated protein-like
                     6"
                     /calculated_mol_wt=217693
     Region          <2..48
                     /region_name="HELP"
                     /note="HELP motif; pfam03451"
                     /db_xref="CDD:460922"
     Region          57..438
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          64..104
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          110..148
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          153..191
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          199..233
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          240..273
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          286..321
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          328..352
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          370..404
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          411..446
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          454..480
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          521..826
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          521..560
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Site            order(535,539,545..546,561..562,580,585,591..592,618..619,
                     642,648..649,662,704,713..714,725..726,744,750,756..757,
                     769,771,789,794,801..802,814..815)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          <668..715
                     /region_name="HELP"
                     /note="HELP motif; pfam03451"
                     /db_xref="CDD:460922"
     Region          687..716
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          725..1026
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(726,744,750,756..757,769,771,789,793,801..802,
                     814..815,834,839,843..844,856,879,884,890,901..902,918,
                     922,928..929,941..942,972,977,983..984,995..996,1015,1019,
                     1025..1026)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          730..768
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          775..817
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          838..901
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          880..1266
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          906..945
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          953..994
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1001..1041
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1044..1080
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1085..1122
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1129..1184
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1193..1235
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1241..1268
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <1350..1401
                     /region_name="HELP"
                     /note="HELP motif; pfam03451"
                     /db_xref="CDD:460922"
     Region          1417..1460
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1466..1504
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1471..1956
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          1509..1551
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1559..1591
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1598..1641
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1690..1728
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1732..1768
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1773..1809
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1819..1865
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1885..1922
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..1958
                     /gene="EML6"
                     /coded_by="XM_061155430.1:1..5877"
                     /db_xref="GeneID:133064897"
ORIGIN      
        1 madrtapscq lrlewvygyr ghqcrnnlyy tagkevvyfv agvgvvyntr ehsqkfflgh
       61 nddiislalh pdktlvatgq vgkepyiciw dsynvqtvsi lkdvhthgva cltfdsdgqr
      121 lasvgldakn tvciwdwrkg kllasatghs drifdiswdp yqpnrvvscg vkhikfwtlc
      181 gnaltakrgi fgktgdlqti lclacakedi tysgalngdi yvwkglnlvr tiqgahsagi
      241 fsmyaceegf atggrdgcir lwdtdfkpit kidlreteqg ykglsirsvc wkadrllagt
      301 qdseifeviv rerdkpmlil qghcegelwa lalhpkkpla vtgsddrsvr lwsladhali
      361 arcnmeeavr svafspdgsq lalgmkdgsf ivlrvrdmte vvhikdrkev ihemkfspdg
      421 sylavgsndg lvdvyavaqr ykkigecnks vsfithidws ldskylqtnd gagerlfykm
      481 psgksltske eikgipwasw tcvkgpevsg iwpkytdvtd insvdanyns svlvsgddfg
      541 lvklfkfpcl kkgakfrkyv ghsahvtnvr wshdfqwvls tggadhsvfq wrfipegvsn
      601 glletapqdg gtdsyseesd sdlsdvpeld sdieqetqin ydrqvykedl pqlkqqskek
      661 nhavpflkre kapedslklq fihgyrgydc rnnlfytqag evvyhiaava vvynrqqhsq
      721 rlylghdddi lsltihpvkd yvatgqvgrd aaihvwdtqt lkclsllkgq hqrgvcaldf
      781 sadgkclvsv glddfhcivf wdwkkgekia ttrghkdkif vvkcnphhvd klvtvgikhi
      841 rfwqqagggf tskrgifgsv gkletmmcvs ygrmedlvfs gaatgdifiw kdilllktvk
      901 ahdgpvfamy aldkgfvtgg kdgivelwdd mferclktya ikraalstss kglllednps
      961 iraitlghgh ilvgtkngei leidksgpmt llvqghmege vwglaahpll picatvsddk
     1021 tlriwelssq hrmlavrklk kggrccafsp dgkalavgln dgsflvvnad tvedmvsfhh
     1081 rkemisdikf skdtgkylav ashdnfvdiy nvltskrvgi ckgassyith idwdsrgkll
     1141 qvnsgakeql ffeaprgkrh iirpseieki ewdtwtcvlg ptcegiwpvh sdvtdvnaas
     1201 ltkdcsllat gddfgfiklf sypvkgqhar fkkyvghsah vtnvrwlhnd svlltvggad
     1261 talmiwtref vgtqesklvd seesdtdaee dggydsdvar ekaidyttki yavsiremeg
     1321 tkphqqmkev sveerppvsr aapqpeklqk nnitkkkklv eelaldhvfg yrgfdcrnnl
     1381 hylndgadii fhtaaagivq nlstgsqsfy lehtddilcl tvnqhpkyrn vvatsqigtt
     1441 psihvwdamt khtvsmlrcf hskgvnyinf satgkllvsv gvdpehtitv wrwqegakva
     1501 srgghlerif vvefrpdsdt qfvsvgvkhm kfwtlagsal lykkgvigsm eaakmqtmls
     1561 vafgannltf tgaingdvyv wkdhflvrlv akahtgpvft myttlrdgli vtggkerptk
     1621 eggavklwdq emkrcrafql etgqlvecvr svcrgkgkil vgtkdgeiie vgeknaasni
     1681 lidghmegei wglathpskd ifisasndgt ariwdladkk llnkvslgha arcaayspdg
     1741 emvaigmkng efvvllvnsl kvwgkkrdrk saiqdirisp dsrflavgss ehtvdfydlt
     1801 qgtslnrigy ckdipsfviq mdfsadgkyi qvstgaykrq vhevplgkqv teavviekit
     1861 waswtsilgd evigiwprna dkadvncacv thaglniatg ddfglvklfd fpctekfakh
     1921 kryfghsahv tnirfshddk yvvstggddc svfvwrcl
//
LOCUS       XP_061011414            1199 aa            linear   MAM 02-DEC-2023
DEFINITION  reticulon-4 isoform X1 [Dama dama].
ACCESSION   XP_061011414
VERSION     XP_061011414.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155431.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1199
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1199
                     /product="reticulon-4 isoform X1"
                     /calculated_mol_wt=129957
     Region          1012..1176
                     /region_name="Reticulon"
                     /note="pfam02453"
                     /db_xref="CDD:460562"
     CDS             1..1199
                     /gene="RTN4"
                     /coded_by="XM_061155431.1:252..3851"
                     /db_xref="GeneID:133064899"
ORIGIN      
        1 medmdqsplv ssssdspprp qpafkyqfvk epeeeeeeee eeedededed leelevlerk
       61 paaalsaapv ataaatpasa plldfgndfv ppaprgplpa aplaaperqp swdpspvssa
      121 vpapsppsit adspsklsed eepparpppp ppadvspqae pawtpaapap aappstpaap
      181 krrgssgsvd etlfalpaas epvihssaek imdlkeqpgn tvsagqedfp svlletaasl
      241 pslsplsaaa fkegeylgdl pavlptegtl peisnetska fsekaknpfv ernvtefsel
      301 eysemessfs gsqktepait vanprdeivv rskdkeedlv srnilhtqqe lstvlmksvk
      361 edrvlspekt kdsfnekgia aeasmreeya dfkpfervwe vkdtykqdsd vlaaggnies
      421 kwedkvdkkr fsdsleptsh ekdsessndd tsfpstpeai kggsgayitc apfnpatten
      481 vstnifplle dhtsenktde kkieekkaqi vteknasakt snpflmaaqd sktdyvtadh
      541 vsqvteevva nvpegltpdl vqeaceseln eatgtkiafe tkmdlvqtse avqeslypat
      601 qlcpsfeese atpspvlpdi vmeaplnsvv psagasaaql ssspletpps vnyesikfep
      661 enpppyeeam nvslkkesgm keeitepesi svavqeteap yisiacdlik etkisteptp
      721 dfssyseiae vaqpvpehse lvedsspdse pvdlfsddsi pevpqkqdea vilvkenlie
      781 issesmtghe nkgklsaspp peggkpyles fqpslgitkd tlapdevsal tqkekiplqm
      841 eelstavyss dslfiaqean lresetfsds spieiidefp tfvsskadss ptlareytdl
      901 evshkseiad iqdgagslac aglphdlsfk siqpkeeevh vpdefskdrg dvskvpilpp
      961 dvsaldaqae vgsiekpkvl vkeaekklps dtqkerrsps aifsaelskt svvdllywrd
     1021 ikktgvvfga slflllsltv fsivsvtayi alallsvtis friykgviqa iqksdeghpf
     1081 raylesevai seelvqkysn salghvncti kelrrlflvd dlvdslkfav lmwvftyvga
     1141 lfngltllil alislfsvpv iyerhqaqid hylglanknv kdamakiqak ipglkrkae
//
LOCUS       XP_061011415             396 aa            linear   MAM 02-DEC-2023
DEFINITION  reticulon-4 isoform X2 [Dama dama].
ACCESSION   XP_061011415
VERSION     XP_061011415.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155432.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..396
                     /product="reticulon-4 isoform X2"
                     /calculated_mol_wt=42510
     Region          209..373
                     /region_name="Reticulon"
                     /note="pfam02453"
                     /db_xref="CDD:460562"
     CDS             1..396
                     /gene="RTN4"
                     /coded_by="XM_061155432.1:238..1428"
                     /db_xref="GeneID:133064899"
ORIGIN      
        1 medmdqsplv ssssdspprp qpafkyqfvk epeeeeeeee eeedededed leelevlerk
       61 paaalsaapv ataaatpasa plldfgndfv ppaprgplpa aplaaperqp swdpspvssa
      121 vpapsppsit adspsklsed eepparpppp ppadvspqae pawtpaapap aappstpaap
      181 krrgssgsvd etlfalpaas epvihssavv dllywrdikk tgvvfgaslf lllsltvfsi
      241 vsvtayiala llsvtisfri ykgviqaiqk sdeghpfray lesevaisee lvqkysnsal
      301 ghvnctikel rrlflvddlv dslkfavlmw vftyvgalfn gltllilali slfsvpviye
      361 rhqaqidhyl glanknvkda makiqakipg lkrkae
//
LOCUS       XP_061011416             377 aa            linear   MAM 02-DEC-2023
DEFINITION  reticulon-4 isoform X3 [Dama dama].
ACCESSION   XP_061011416
VERSION     XP_061011416.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155433.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..377
                     /product="reticulon-4 isoform X3"
                     /calculated_mol_wt=40573
     Region          190..354
                     /region_name="Reticulon"
                     /note="pfam02453"
                     /db_xref="CDD:460562"
     CDS             1..377
                     /gene="RTN4"
                     /coded_by="XM_061155433.1:237..1370"
                     /db_xref="GeneID:133064899"
ORIGIN      
        1 medmdqsplv ssssdspprp qpafkyqfvk epeeeeeeee eeedededed leelevlerk
       61 paaalsaapv ataaatpasa plldfgndfv ppaprgplpa aplaaperqp swdpspvssa
      121 vpapsppsit adspsklsed eepparpppp ppadvspqae pawtpaapap aappstpaap
      181 krrgssgsvv vdllywrdik ktgvvfgasl flllsltvfs ivsvtayial allsvtisfr
      241 iykgviqaiq ksdeghpfra ylesevaise elvqkysnsa lghvnctike lrrlflvddl
      301 vdslkfavlm wvftyvgalf ngltllilal islfsvpviy erhqaqidhy lglanknvkd
      361 amakiqakip glkrkae
//
LOCUS       XP_061011417             199 aa            linear   MAM 02-DEC-2023
DEFINITION  reticulon-4 isoform X4 [Dama dama].
ACCESSION   XP_061011417
VERSION     XP_061011417.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155434.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..199
                     /product="reticulon-4 isoform X4"
                     /calculated_mol_wt=22264
     Region          12..176
                     /region_name="Reticulon"
                     /note="pfam02453"
                     /db_xref="CDD:460562"
     CDS             1..199
                     /gene="RTN4"
                     /coded_by="XM_061155434.1:146..745"
                     /db_xref="GeneID:133064899"
ORIGIN      
        1 mdgqkknwkd kvvdllywrd ikktgvvfga slflllsltv fsivsvtayi alallsvtis
       61 friykgviqa iqksdeghpf raylesevai seelvqkysn salghvncti kelrrlflvd
      121 dlvdslkfav lmwvftyvga lfngltllil alislfsvpv iyerhqaqid hylglanknv
      181 kdamakiqak ipglkrkae
//
LOCUS       XP_061011418            2363 aa            linear   MAM 02-DEC-2023
DEFINITION  spectrin beta chain, non-erythrocytic 1 isoform X1 [Dama dama].
ACCESSION   XP_061011418
VERSION     XP_061011418.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155435.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2363
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2363
                     /product="spectrin beta chain, non-erythrocytic 1 isoform
                     X1"
                     /calculated_mol_wt=274259
     Region          3..156
                     /region_name="CH_SPTBN1_rpt1"
                     /note="first calponin homology (CH) domain found in
                     spectrin beta chain, non-erythrocytic 1 (SPTBN1) and
                     similar proteins; cd21316"
                     /db_xref="CDD:409165"
     Site            order(41,44..45,48..49,52..53,56,110,113..114,117,124,
                     129..137,144..145,147..148,151..152,155..156)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409165"
     Region          48..>530
                     /region_name="SAC6"
                     /note="Ca2+-binding actin-bundling protein fimbrin/plastin
                     (EF-Hand superfamily) [Cytoskeleton]; COG5069"
                     /db_xref="CDD:227401"
     Region          173..277
                     /region_name="CH_SPTB_like_rpt2"
                     /note="second calponin homology (CH) domain found in the
                     beta-I spectrin-like subfamily; cd21248"
                     /db_xref="CDD:409097"
     Site            order(175,179,229,231..232,235,242,247..255,264..265,
                     267..268,271..272,275)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409097"
     Region          530..743
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            637..642
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          642..849
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            743..748
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          851..1061
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            954..959
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          958..1169
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1061..1066
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1172..1380
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1274..1279
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1381..1591
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1484..1489
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1592..1804
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1696..1701
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1805..2026
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1909..1914
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          2016..>2074
                     /region_name="Spectrin"
                     /note="Spectrin repeat; pfam00435"
                     /db_xref="CDD:395348"
     Region          2199..2304
                     /region_name="PH_beta_spectrin"
                     /note="Beta-spectrin pleckstrin homology (PH) domain;
                     cd10571"
                     /db_xref="CDD:269975"
     Site            order(2206,2219..2221,2267)
                     /site_type="other"
                     /note="non-cannonical phosphoinositide binding site
                     [chemical binding]"
                     /db_xref="CDD:269975"
     CDS             1..2363
                     /gene="SPTBN1"
                     /coded_by="XM_061155435.1:169..7260"
                     /db_xref="GeneID:133064900"
ORIGIN      
        1 mtttvatdyd nieiqqqysd vnnrwdvddw dnenssarlf ersrikalad ereavqkktf
       61 tkwvnshlar vscritdlyt dlrdgrmlik llevlsgerl pkptkgrmri hclenvdkal
      121 qflkeqrvhl enmgshdivd gnhrltlgli wtiilrfqiq disvetednk ekksakdall
      181 lwcqmktagy pnvnihnftt swrdgmafna lihkhrpdli dfdklkksna hynlqnafnl
      241 aeqhlgltkl ldpedisvdh pdeksiityv vtyyhyfskm kalavegkri gkvldnaiet
      301 ekmiekyesl asdllewieq tiiilnnrkf anslvgvqqq lqafntyrtv ekppkftekg
      361 nlevllftiq skmrannqkv ympregklis dinkawerle kaeherelal rnelirqekl
      421 eqlarrfdrk aamretwlse nqrlvsqdnf gfdlpaveaa tkkheaietd iaayeervqa
      481 vvavarelea enyhdikrit arkdnvirlw eyllellrar rqrlemnlgl qkifqemlyi
      541 mdwmdemkvl llsqdygkhl lgvedllqkh alveadigiq aervrgvnas aqkfatdgeg
      601 ykpcdpqvir drvahmefcy qelcqlaaer rarleesrrl wkffwemaee egwirekeki
      661 lssddygkdl tsvmrllskh rafedemsgr sghfeqaike gedmiaeehf gsekireria
      721 yireqwahle qlsairkkrl eeasllhqfq adaddidawm ldilkivssn dvghdeystq
      781 slvkkhkdva eeianyrpti dslheqagal pqehaespdv rgrlagieer ykevaeltrl
      841 rkqalqdtla lykmfseada celwidekeq wlnnmqipek ledleviqhr feslepemnn
      901 qasrvavvnq iarqlmhsgh psekeikaqq dklntrwsqf relvdrkkda llsalsiqny
      961 hlecnetksw irektkvies tqdlgndlag vmalqrkltg merdlvaiea klsdlqkeae
     1021 klesehpdqa qailsrlaei sdvweemktt lknreaslge asklqqflrd lddfqswlsr
     1081 tqtaiasedm pntlteaekl ltqhenikne idnyeedyqk mrdmgemvtq gqtdaqymfl
     1141 rqrlqaldtg wnelhkmwen rqsllsqsha hqqflrdtkq aeaflnnqey vlahtemptt
     1201 legaeaaikk qedfmttmda neekinavve tgrrlvsdgn insdriqekv dsiddrhrkn
     1261 reaatellmr lkdnrdlqkf lqdcqelslw inekmltaqd msydearnlh skwlkhqafm
     1321 aelasnkewl dkiekegmql isekpeteav vkekltglhk mwevlesttq tkaqrlfdan
     1381 kaelftqsca dldkwlhgle sqiqsddygk dltsvnillk kqqmlenqme vrkkeieelq
     1441 sqaqalsqeg kstdevdskr ltvqtkfmel leplnerkqn llaskeihqf nrdvedeilw
     1501 vgermplats tdhghnlqtv qllikknqtl qkeiqghqpr iddifersqn iitdsslnae
     1561 airqrladlk qlwgllieet ekrhrrleea hraqqyyfda aeaeawmseq elymmseeka
     1621 kdeqsavsml kkhqileqav edyaetvhql sktsralvad shpeserism rqskvdklya
     1681 glkdlaeerr gklderhrlf qlnrevddle qwiaerevva gshelgqdye hvtmlqerfr
     1741 efardtgnig qervdtvnhm adelinsghs daatiaewkd glneawadll elidtrtqil
     1801 aasyelhkfy hdakeifgri qdkhkklpee lgrdqntvet lqrmhttfeh diqalgtqvr
     1861 qlqedaarlq aayagdkadd iqkrenevle awkalldace grrvrlvdtg dkfrffsmvr
     1921 dlmlwmedvi rqieaqekpr dvssvellmn nhqgikaeid arndsfttci elgksllark
     1981 hyaseeikek llqltekrke midkwedrwe wlrlilevhq fsrdasvaea wllgqepyls
     2041 sreigqsvde veklikrhea feksaatwde rfsalerltt lellevrrqq eeeerkrrpp
     2101 spepstkvse dtesqqqwdt skgeqvsqng lpaeqgsprm aetvdtsemv ngaaeqrtss
     2161 kesspipspt sdrkaktalp aqsaatlpar tqetpsaqme gflnrkhewe ahnkkassrs
     2221 whnvycvinn qemgfykdak taasgipyhs evpvslkeai cevaldykkk khvfklrlnd
     2281 gneylfqakd deemntwiqa issaissdkh evsastqstp assraqtlpt svvtitsess
     2341 pgkrekdkek dkekrfslfg kkk
//
LOCUS       XP_061011419            2350 aa            linear   MAM 02-DEC-2023
DEFINITION  spectrin beta chain, non-erythrocytic 1 isoform X2 [Dama dama].
ACCESSION   XP_061011419
VERSION     XP_061011419.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155436.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2350
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2350
                     /product="spectrin beta chain, non-erythrocytic 1 isoform
                     X2"
                     /calculated_mol_wt=272550
     Region          29..143
                     /region_name="CH_SPTB-like_rpt1"
                     /note="first calponin homology (CH) domain found in the
                     beta-I spectrin-like subfamily; cd21246"
                     /db_xref="CDD:409095"
     Site            order(31..32,35..36,39..40,43,97,100..101,104,111,
                     116..124,131..132,134..135,138..139,142..143)
                     /site_type="other"
                     /note="actin binding site [polypeptide binding]"
                     /db_xref="CDD:409095"
     Region          34..>517
                     /region_name="SAC6"
                     /note="Ca2+-binding actin-bundling protein fimbrin/plastin
                     (EF-Hand superfamily) [Cytoskeleton]; COG5069"
                     /db_xref="CDD:227401"
     Region          160..264
                     /region_name="CH_SPTB_like_rpt2"
                     /note="second calponin homology (CH) domain found in the
                     beta-I spectrin-like subfamily; cd21248"
                     /db_xref="CDD:409097"
     Site            order(162,166,216,218..219,222,229,234..242,251..252,
                     254..255,258..259,262)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409097"
     Region          517..730
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            624..629
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          629..836
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            730..735
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          838..1048
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            941..946
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          945..1156
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1048..1053
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1159..1367
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1261..1266
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1368..1578
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1471..1476
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1579..1791
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1683..1688
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1792..2013
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1896..1901
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          2003..>2061
                     /region_name="Spectrin"
                     /note="Spectrin repeat; pfam00435"
                     /db_xref="CDD:395348"
     Region          2186..2291
                     /region_name="PH_beta_spectrin"
                     /note="Beta-spectrin pleckstrin homology (PH) domain;
                     cd10571"
                     /db_xref="CDD:269975"
     Site            order(2193,2206..2208,2254)
                     /site_type="other"
                     /note="non-cannonical phosphoinositide binding site
                     [chemical binding]"
                     /db_xref="CDD:269975"
     CDS             1..2350
                     /gene="SPTBN1"
                     /coded_by="XM_061155436.1:474..7526"
                     /db_xref="GeneID:133064900"
ORIGIN      
        1 melqrtssis gplspaytgq vpynfnqleg rfkqlqdere avqkktftkw vnshlarvsc
       61 ritdlytdlr dgrmliklle vlsgerlpkp tkgrmrihcl envdkalqfl keqrvhlenm
      121 gshdivdgnh rltlgliwti ilrfqiqdis vetednkekk sakdalllwc qmktagypnv
      181 nihnfttswr dgmafnalih khrpdlidfd klkksnahyn lqnafnlaeq hlgltklldp
      241 edisvdhpde ksiityvvty yhyfskmkal avegkrigkv ldnaietekm iekyeslasd
      301 llewieqtii ilnnrkfans lvgvqqqlqa fntyrtvekp pkftekgnle vllftiqskm
      361 rannqkvymp regklisdin kawerlekae herelalrne lirqekleql arrfdrkaam
      421 retwlsenqr lvsqdnfgfd lpaveaatkk heaietdiaa yeervqavva vareleaeny
      481 hdikritark dnvirlweyl lellrarrqr lemnlglqki fqemlyimdw mdemkvllls
      541 qdygkhllgv edllqkhalv eadigiqaer vrgvnasaqk fatdgegykp cdpqvirdrv
      601 ahmefcyqel cqlaaerrar leesrrlwkf fwemaeeegw irekekilss ddygkdltsv
      661 mrllskhraf edemsgrsgh feqaikeged miaeehfgse kireriayir eqwahleqls
      721 airkkrleea sllhqfqada ddidawmldi lkivssndvg hdeystqslv kkhkdvaeei
      781 anyrptidsl heqagalpqe haespdvrgr lagieeryke vaeltrlrkq alqdtlalyk
      841 mfseadacel widekeqwln nmqipekled leviqhrfes lepemnnqas rvavvnqiar
      901 qlmhsghpse keikaqqdkl ntrwsqfrel vdrkkdalls alsiqnyhle cnetkswire
      961 ktkviestqd lgndlagvma lqrkltgmer dlvaieakls dlqkeaekle sehpdqaqai
     1021 lsrlaeisdv weemkttlkn reaslgeask lqqflrdldd fqswlsrtqt aiasedmpnt
     1081 lteaeklltq henikneidn yeedyqkmrd mgemvtqgqt daqymflrqr lqaldtgwne
     1141 lhkmwenrqs llsqshahqq flrdtkqaea flnnqeyvla htempttleg aeaaikkqed
     1201 fmttmdanee kinavvetgr rlvsdgnins driqekvdsi ddrhrknrea atellmrlkd
     1261 nrdlqkflqd cqelslwine kmltaqdmsy dearnlhskw lkhqafmael asnkewldki
     1321 ekegmqlise kpeteavvke kltglhkmwe vlesttqtka qrlfdankae lftqscadld
     1381 kwlhglesqi qsddygkdlt svnillkkqq mlenqmevrk keieelqsqa qalsqegkst
     1441 devdskrltv qtkfmellep lnerkqnlla skeihqfnrd vedeilwvge rmplatstdh
     1501 ghnlqtvqll ikknqtlqke iqghqpridd ifersqniit dsslnaeair qrladlkqlw
     1561 gllieetekr hrrleeahra qqyyfdaaea eawmseqely mmseekakde qsavsmlkkh
     1621 qileqavedy aetvhqlskt sralvadshp eserismrqs kvdklyaglk dlaeerrgkl
     1681 derhrlfqln revddleqwi aerevvagsh elgqdyehvt mlqerfrefa rdtgnigqer
     1741 vdtvnhmade linsghsdaa tiaewkdgln eawadlleli dtrtqilaas yelhkfyhda
     1801 keifgriqdk hkklpeelgr dqntvetlqr mhttfehdiq algtqvrqlq edaarlqaay
     1861 agdkaddiqk renevleawk alldacegrr vrlvdtgdkf rffsmvrdlm lwmedvirqi
     1921 eaqekprdvs svellmnnhq gikaeidarn dsfttcielg ksllarkhya seeikekllq
     1981 ltekrkemid kwedrwewlr lilevhqfsr dasvaeawll gqepylssre igqsvdevek
     2041 likrheafek saatwderfs alerlttlel levrrqqeee erkrrppspe pstkvsedte
     2101 sqqqwdtskg eqvsqnglpa eqgsprmaet vdtsemvnga aeqrtsskes spipsptsdr
     2161 kaktalpaqs aatlpartqe tpsaqmegfl nrkheweahn kkassrswhn vycvinnqem
     2221 gfykdaktaa sgipyhsevp vslkeaicev aldykkkkhv fklrlndgne ylfqakddee
     2281 mntwiqaiss aissdkhevs astqstpass raqtlptsvv titsesspgk rekdkekdke
     2341 krfslfgkkk
//
LOCUS       XP_061011420             167 aa            linear   MAM 02-DEC-2023
DEFINITION  acylphosphatase-2 isoform X1 [Dama dama].
ACCESSION   XP_061011420
VERSION     XP_061011420.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155437.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..167
                     /product="acylphosphatase-2 isoform X1"
                     /calculated_mol_wt=18592
     Region          38..>100
                     /region_name="Acylphosphatase"
                     /note="cl00551"
                     /db_xref="CDD:444972"
     CDS             1..167
                     /gene="ACYP2"
                     /coded_by="XM_061155437.1:110..613"
                     /db_xref="GeneID:133064901"
ORIGIN      
        1 mcplplaaaa vtaprtplrl lgrglaaams tarplksvdy evfgrvqgvc frmytedear
       61 kigvvgwvkn tskgtvtgqv qgpeekvnsi yflarktplp ftdlshpyqg qeqhmkntsf
      121 qetddwstpr kswlskigsp ssridrtnfs nektiskley snfsiry
//
LOCUS       XP_061011421             162 aa            linear   MAM 02-DEC-2023
DEFINITION  acylphosphatase-2 isoform X2 [Dama dama].
ACCESSION   XP_061011421
VERSION     XP_061011421.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155438.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..162
                     /product="acylphosphatase-2 isoform X2"
                     /calculated_mol_wt=17941
     Region          38..160
                     /region_name="Acylphosphatase"
                     /note="pfam00708"
                     /db_xref="CDD:425830"
     CDS             1..162
                     /gene="ACYP2"
                     /coded_by="XM_061155438.1:110..598"
                     /db_xref="GeneID:133064901"
ORIGIN      
        1 mcplplaaaa vtaprtplrl lgrglaaams tarplksvdy evfgrvqgvc frmytedear
       61 kigvvgwvkn tskgtvtgqv qgpeekvnsi ktplpftdls hpyqgqeqhm kntsfqetdd
      121 wstprkswls kigspssrid rtnfsnekti skleysnfsi ry
//
LOCUS       XP_061011422             130 aa            linear   MAM 02-DEC-2023
DEFINITION  acylphosphatase-2 isoform X3 [Dama dama].
ACCESSION   XP_061011422
VERSION     XP_061011422.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155439.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..130
                     /product="acylphosphatase-2 isoform X3"
                     /calculated_mol_wt=14192
     Region          38..130
                     /region_name="Acylphosphatase"
                     /note="pfam00708"
                     /db_xref="CDD:425830"
     CDS             1..130
                     /gene="ACYP2"
                     /coded_by="XM_061155439.1:110..502"
                     /db_xref="GeneID:133064901"
ORIGIN      
        1 mcplplaaaa vtaprtplrl lgrglaaams tarplksvdy evfgrvqgvc frmytedear
       61 kigvvgwvkn tskgtvtgqv qgpeekvnsi gekiqswkvs csrsrskfrs epplsraraa
      121 heehifprnr
//
LOCUS       XP_061011423             130 aa            linear   MAM 02-DEC-2023
DEFINITION  acylphosphatase-2 isoform X4 [Dama dama].
ACCESSION   XP_061011423
VERSION     XP_061011423.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155440.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..130
                     /product="acylphosphatase-2 isoform X4"
                     /calculated_mol_wt=14104
     Region          38..>89
                     /region_name="Acylphosphatase"
                     /note="cl00551"
                     /db_xref="CDD:444972"
     CDS             1..130
                     /gene="ACYP2"
                     /coded_by="XM_061155440.1:110..502"
                     /db_xref="GeneID:133064901"
ORIGIN      
        1 mcplplaaaa vtaprtplrl lgrglaaams tarplksvdy evfgrvqgvc frmytedear
       61 kigvvgwvkn tskgtvtgqv qgpeekvnsi cissvlknea rnvcwlpdka nlcheaeflk
      121 lrdvsyplee
//
LOCUS       XP_061011424             127 aa            linear   MAM 02-DEC-2023
DEFINITION  acylphosphatase-2 isoform X5 [Dama dama].
ACCESSION   XP_061011424
VERSION     XP_061011424.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155441.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..127
                     /product="acylphosphatase-2 isoform X5"
                     /calculated_mol_wt=13829
     Region          38..125
                     /region_name="Acylphosphatase"
                     /note="pfam00708"
                     /db_xref="CDD:425830"
     CDS             1..127
                     /gene="ACYP2"
                     /coded_by="XM_061155441.1:110..493"
                     /db_xref="GeneID:133064901"
ORIGIN      
        1 mcplplaaaa vtaprtplrl lgrglaaams tarplksvdy evfgrvqgvc frmytedear
       61 kigvvgwvkn tskgtvtgqv qgpeekvnsm kswlskigsp ssridrtnfs nektiskley
      121 snfsiry
//
LOCUS       XP_061011425             111 aa            linear   MAM 02-DEC-2023
DEFINITION  acylphosphatase-2 isoform X6 [Dama dama].
ACCESSION   XP_061011425
VERSION     XP_061011425.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155442.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..111
                     /product="acylphosphatase-2 isoform X6"
                     /calculated_mol_wt=11941
     Region          38..111
                     /region_name="Acylphosphatase"
                     /note="pfam00708"
                     /db_xref="CDD:425830"
     CDS             1..111
                     /gene="ACYP2"
                     /coded_by="XM_061155442.1:110..445"
                     /db_xref="GeneID:133064901"
ORIGIN      
        1 mcplplaaaa vtaprtplrl lgrglaaams tarplksvdy evfgrvqgvc frmytedear
       61 kigvvgwvkn tskgtvtgqv qgpeekvnsi sepplsrara aheehifprn r
//
LOCUS       XP_061011426            1880 aa            linear   MAM 02-DEC-2023
DEFINITION  proteasome activator complex subunit 4 isoform X1 [Dama dama].
ACCESSION   XP_061011426
VERSION     XP_061011426.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155443.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1880
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1880
                     /product="proteasome activator complex subunit 4 isoform
                     X1"
                     /calculated_mol_wt=215175
     Region          367..865
                     /region_name="BLM10_mid"
                     /note="Proteasome-substrate-size regulator, mid region;
                     pfam16507"
                     /db_xref="CDD:465150"
     Region          1608..1628
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          1679..1708
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          1718..1749
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          1794..1879
                     /region_name="DUF3437"
                     /note="Domain of unknown function (DUF3437); pfam11919"
                     /db_xref="CDD:463397"
     CDS             1..1880
                     /gene="PSME4"
                     /coded_by="XM_061155443.1:27..5669"
                     /db_xref="GeneID:133064903"
ORIGIN      
        1 mepaeraggr dplepggppg pdpqgfvpqk eivynkllpy aerldaesdl qlaqiksnlg
       61 ravqlqelwp gglfwtrkls tyirlygrkf skedhvlfik llyelvsipk leismmqgfa
      121 rllinllkkk ellsrddlel pwrplydmve rilysktehl glnwfpnsve nvlktlvksc
      181 rpyfpadata emleewrplm cpfdvtmqka ityfeiflpt slppelhhkg fklwfdelig
      241 lwvsvqnlpq wegfslvapp cltlrphglq harplcpspt pgacsfhvhq qlvnlfarla
      301 tdnigyidwd pyvpkvftri lrslnlpvgs sqvlvprflt naydighavi witammggps
      361 klvqkhlagl fnsitsfyhp snngrwlnkl mkllqrlpns vvrrlhrery kkpswltpvp
      421 dshkltdqdv tdfvqciiqp vllamfsktg sleaaqalqn lalmrpelvi ppvlertyta
      481 letltephql tatlscvigv arslvsggrw fpegpthmlp llmralpgvd pndfskcmit
      541 fqfiatfstl vplvdcssvl qerndlteve relcsataef edfvlqfmdr cfgliesstl
      601 eqtreetete kmthleslve lglsstfsti ltqcskeifm valqkvfnfs ishifetrva
      661 grmvadmcra avkccpeesl klfvphccsv itqltmnddv lndeeldkel lwnlqllsei
      721 trvdgkklll yreqlvkilq rtlhltckqg ytlscnllhh llrsttliyp teycsvpggf
      781 dkppseyfpi kdwgkpgdlw nlgiqwhvps seevafafyl ldsflqpels klqrcgngel
      841 emsrddvlqs ltivhnclig sgnllpplkg epvtnlvpsm vsleetklyt gleydlsren
      901 yretiarvir kllnhilnns eddtkslfli ikiigdllqf qgshkhefds rwksfnlvkk
      961 smenrlhgkk qhirallidr vmlqhelrtl tvegceykki hqdmirdllr lstssysqvr
     1021 nkaqqtffaa lgaynfccrd iiplvlgflr pdrqdvtqqq fkgalycllg nhsgvclanl
     1081 hdwdcivqtw paivssglsq amslekpsiv rlfddlaeki hrqyetigld ftipkscvgi
     1141 aellqqsknp sinqtmlsse eikeglkrqq ernvdalrny enlvntlldg veqrnlpwkf
     1201 ehigigllsl llrddrvlpl rairffvenl nhdaivvrkm aisavagilk qlkrthkklt
     1261 vspyeisgyp kptqivagdr pdnhwlhyds ksiprtkkew esscfvekth wgyytwpqnm
     1321 vvyagveeqp klgrsredlt eaeqiifdhf sdpkfveqli tflsledrkg kdkfnprrfc
     1381 lfkgifrnfd daflpvlkph lerlvadshe stqrcvaeii aglirgskhw tfekveklwe
     1441 llcpllrtal snitvetynd wgtciatsce srdprklhwl felllespls geggsfvdac
     1501 rlyvlqggla qqewrvpell hrllkylepk ltqvyknvre rigsvltyif midvslpnta
     1561 ptasprvpef tarileklkp lmdvdeeiqn hvmeengige edertqgikl lktilkwlma
     1621 sagrsfstav aeqlqllplf fkiapvendn sydelkrdak lclslmsqgl lyphqvplvl
     1681 qvlnqtarss swharytvlt ylqtmvfynl fiflnnedav kdirwlvisl ledeqlevre
     1741 maattlsgll qcnfltmdsp mqihfeqlck tklpkkrkrd pgfvgdtips aelvkrhagv
     1801 lglgacvlss pydvptwmpq llmnlsahln dpqpiemtvk ktlsnfrrth hdnwqehkqq
     1861 ftddqllvlt dllvspcyya
//
LOCUS       XP_061011427            1843 aa            linear   MAM 02-DEC-2023
DEFINITION  proteasome activator complex subunit 4 isoform X2 [Dama dama].
ACCESSION   XP_061011427
VERSION     XP_061011427.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155444.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1843
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1843
                     /product="proteasome activator complex subunit 4 isoform
                     X2"
                     /calculated_mol_wt=211220
     Region          330..828
                     /region_name="BLM10_mid"
                     /note="Proteasome-substrate-size regulator, mid region;
                     pfam16507"
                     /db_xref="CDD:465150"
     Region          1571..1591
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          1642..1671
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          1681..1712
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          1757..1842
                     /region_name="DUF3437"
                     /note="Domain of unknown function (DUF3437); pfam11919"
                     /db_xref="CDD:463397"
     CDS             1..1843
                     /gene="PSME4"
                     /coded_by="XM_061155444.1:27..5558"
                     /db_xref="GeneID:133064903"
ORIGIN      
        1 mepaeraggr dplepggppg pdpqgfvpqk eivynkllpy aerldaesdl qlaqiksnlg
       61 ravqlqelwp gglfwtrkls tyirlygrkf skedhvlfik llyelvsipk leismmqgfa
      121 rllinllkkk ellsrddlel pwrplydmve rilysktehl glnwfpnsve nvlktlvksc
      181 rpyfpadata emleewrplm cpfdvtmqka ityfeiflpt slppelhhkg fklwfdelig
      241 lwvsvqnlpq wegqlvnlfa rlatdnigyi dwdpyvpkvf trilrslnlp vgssqvlvpr
      301 fltnaydigh aviwitammg gpsklvqkhl aglfnsitsf yhpsnngrwl nklmkllqrl
      361 pnsvvrrlhr erykkpswlt pvpdshkltd qdvtdfvqci iqpvllamfs ktgsleaaqa
      421 lqnlalmrpe lvippvlert ytaletltep hqltatlscv igvarslvsg grwfpegpth
      481 mlpllmralp gvdpndfskc mitfqfiatf stlvplvdcs svlqerndlt everelcsat
      541 aefedfvlqf mdrcfglies stleqtreet etekmthles lvelglsstf stiltqcske
      601 ifmvalqkvf nfsishifet rvagrmvadm craavkccpe eslklfvphc csvitqltmn
      661 ddvlndeeld kellwnlqll seitrvdgkk lllyreqlvk ilqrtlhltc kqgytlscnl
      721 lhhllrsttl iypteycsvp ggfdkppsey fpikdwgkpg dlwnlgiqwh vpsseevafa
      781 fylldsflqp elsklqrcgn gelemsrddv lqsltivhnc ligsgnllpp lkgepvtnlv
      841 psmvsleetk lytgleydls renyretiar virkllnhil nnseddtksl fliikiigdl
      901 lqfqgshkhe fdsrwksfnl vkksmenrlh gkkqhirall idrvmlqhel rtltvegcey
      961 kkihqdmird llrlstssys qvrnkaqqtf faalgaynfc crdiiplvlg flrpdrqdvt
     1021 qqqfkgalyc llgnhsgvcl anlhdwdciv qtwpaivssg lsqamslekp sivrlfddla
     1081 ekihrqyeti gldftipksc vgiaellqqs knpsinqtml sseeikeglk rqqernvdal
     1141 rnyenlvntl ldgveqrnlp wkfehigigl lslllrddrv lplrairffv enlnhdaivv
     1201 rkmaisavag ilkqlkrthk kltvspyeis gypkptqiva gdrpdnhwlh ydsksiprtk
     1261 kewesscfve kthwgyytwp qnmvvyagve eqpklgrsre dlteaeqiif dhfsdpkfve
     1321 qlitflsled rkgkdkfnpr rfclfkgifr nfddaflpvl kphlerlvad shestqrcva
     1381 eiiaglirgs khwtfekvek lwellcpllr talsnitvet yndwgtciat scesrdprkl
     1441 hwlfellles plsgeggsfv dacrlyvlqg glaqqewrvp ellhrllkyl epkltqvykn
     1501 vrerigsvlt yifmidvslp ntaptasprv peftarilek lkplmdvdee iqnhvmeeng
     1561 igeedertqg ikllktilkw lmasagrsfs tavaeqlqll plffkiapve ndnsydelkr
     1621 daklclslms qgllyphqvp lvlqvlnqta rssswharyt vltylqtmvf ynlfiflnne
     1681 davkdirwlv islledeqle vremaattls gllqcnfltm dspmqihfeq lcktklpkkr
     1741 krdpgfvgdt ipsaelvkrh agvlglgacv lsspydvptw mpqllmnlsa hlndpqpiem
     1801 tvkktlsnfr rthhdnwqeh kqqftddqll vltdllvspc yya
//
LOCUS       XP_061011428             188 aa            linear   MAM 02-DEC-2023
DEFINITION  glutathione-specific gamma-glutamylcyclotransferase 2 isoform X1
            [Dama dama].
ACCESSION   XP_061011428
VERSION     XP_061011428.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155445.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..188
                     /product="glutathione-specific
                     gamma-glutamylcyclotransferase 2 isoform X1"
                     /calculated_mol_wt=21155
     Region          1..174
                     /region_name="ChaC"
                     /note="ChaC-like protein; pfam04752"
                     /db_xref="CDD:398428"
     Site            order(3,6,8..9,82..83,87,111)
                     /site_type="active"
                     /note="putative active site pocket [active]"
                     /db_xref="CDD:119400"
     Site            order(53..54,56,87..91,93,107,110)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:119400"
     Site            83
                     /site_type="active"
                     /note="putative catalytic residue [active]"
                     /db_xref="CDD:119400"
     CDS             1..188
                     /gene="CHAC2"
                     /coded_by="XM_061155445.1:116..682"
                     /db_xref="GeneID:133064904"
ORIGIN      
        1 mwvfgygsli wkvdfpyqdk lvgyisgysr rfwqgstdhr gvpgkpgrvv tlvedpagcv
       61 wgvayrlpag reeeikayld frekggyrtt tvifypkdat tepfsvllyi gtcdnpnylg
      121 paplediaeq ifnaagpsgk nteylfelan smrslvpeda dehlfslekl vkerlegkqn
      181 fnclkrpn
//
LOCUS       XP_061011429             176 aa            linear   MAM 02-DEC-2023
DEFINITION  glutathione-specific gamma-glutamylcyclotransferase 2 isoform X2
            [Dama dama].
ACCESSION   XP_061011429
VERSION     XP_061011429.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155446.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..176
                     /product="glutathione-specific
                     gamma-glutamylcyclotransferase 2 isoform X2"
                     /calculated_mol_wt=19921
     Region          1..162
                     /region_name="ChaC"
                     /note="ChaC-like protein; pfam04752"
                     /db_xref="CDD:398428"
     Site            order(3,6,8..9,70..71,75,99)
                     /site_type="active"
                     /note="putative active site pocket [active]"
                     /db_xref="CDD:119400"
     Site            order(42..43,45,75..79,81,95,98)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:119400"
     Site            71
                     /site_type="active"
                     /note="putative catalytic residue [active]"
                     /db_xref="CDD:119400"
     CDS             1..176
                     /gene="CHAC2"
                     /coded_by="XM_061155446.1:116..646"
                     /db_xref="GeneID:133064904"
ORIGIN      
        1 mwvfgygsli wkvdfpyqdk lvgyisgysr rfwqgstdhr gvpgkgcvwg vayrlpagre
       61 eeikayldfr ekggyrtttv ifypkdatte pfsvllyigt cdnpnylgpa plediaeqif
      121 naagpsgknt eylfelansm rslvpedade hlfsleklvk erlegkqnfn clkrpn
//
LOCUS       XP_061011430             540 aa            linear   MAM 02-DEC-2023
DEFINITION  probable G-protein coupled receptor 75 [Dama dama].
ACCESSION   XP_061011430
VERSION     XP_061011430.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155447.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..540
                     /product="probable G-protein coupled receptor 75"
                     /calculated_mol_wt=59277
     Region          44..387
                     /region_name="7tmA_GPR75"
                     /note="G protein-coupled receptor 75, member of the class
                     A family of seven-transmembrane G protein-coupled
                     receptors; cd15007"
                     /db_xref="CDD:320136"
     Region          44..70
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320136"
     Region          79..104
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320136"
     Site            order(101,104..105,118..123,125..126,129,173,175..179,199,
                     202..204,206..208,210..211,334,337..338,340..341,344,
                     354..355,357..359,362,365..366)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320136"
     Region          118..148
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320136"
     Region          159..181
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320136"
     Region          199..228
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320136"
     Region          314..344
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320136"
     Region          355..380
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320136"
     CDS             1..540
                     /gene="GPR75"
                     /coded_by="XM_061155447.1:209..1831"
                     /db_xref="GeneID:133064907"
ORIGIN      
        1 mnstghlqdv pnttlphvph aqggnstgir dglqepvhta tlvtctflla vifclgsygn
       61 fivflsffdp afrkfrtnfd fmilnlsfcd lficgvtapm ftfvlffssa sgipdtfcft
      121 fhltssgfii mslktvavia lhrlrmvlgk qpnrtasfpc tllltlllwt tsftlatlat
      181 lktskshfcl pmssliageg kailslyvvd ftfcvavvsv syvmiaqtlr knaqvrkcpa
      241 vitvdasrpq pfmgapvkgg gepiqcpmpa lyrnqnynkl qhvqthgytk spnqlptpaa
      301 srlqlvsavn lstakdskav vtcviivlsv llcclplgis lvqvvlssng sfilyqfelf
      361 gftliflksg lnpfiysrns aglrrkvlwc lqyiglgffc ckhktrlram gkgnlevnrn
      421 ksshhetnsa ymlspkpqkk fvdqacgpsh skesvvsprm saghqhygqs sstpintrie
      481 pyysiynssa sqeegvphnl qpvnsfgfan syiamhyhtt ndlmqeydst sakqipvpsv
//
LOCUS       XP_061011431             525 aa            linear   MAM 02-DEC-2023
DEFINITION  ankyrin repeat and SOCS box protein 3 [Dama dama].
ACCESSION   XP_061011431
VERSION     XP_061011431.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155448.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..525
                     /product="ankyrin repeat and SOCS box protein 3"
                     /calculated_mol_wt=58682
     Region          <16..249
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          42..76
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          78..109
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          111..142
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          146..176
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(147,151..152,155..157,159..160,164,167,176,178,180,
                     184..185,188..190,192..193,197,200,209,211,213,217..218,
                     221..223,225..226,230,233)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          178..209
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          211..240
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          216..309
                     /region_name="Ank_2"
                     /note="Ankyrin repeats (3 copies); pfam12796"
                     /db_xref="CDD:463710"
     Region          245..279
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          281..309
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          314..346
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          458..508
                     /region_name="SOCS_ASB3"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     ASB3-like proteins. ASB family members have a C-terminal
                     SOCS box and an N-terminal ankyrin-related sequence. ABS3
                     has been shown to be negative regulator of TNF-R2-mediated
                     cellular responses to TNF-alpha...; cd03722"
                     /db_xref="CDD:239692"
     Site            order(459..464,470,483,489,494)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239692"
     CDS             1..525
                     /gene="ASB3"
                     /coded_by="XM_061155448.1:167..1744"
                     /db_xref="GeneID:133064908"
ORIGIN      
        1 mdfteayadt cstvglaare gnvkvlrkll kkgrsidvad nrgwmpihea ayhnsveclr
       61 llihadssen yiktktfegf calhlaasqg hwkiiqille agadpnattl eettplflav
      121 engqmdvlrl llrhganvng shsmcgwnal hqatfqenae iiklllkkga nkecqddfgi
      181 tplfvaaqyg kleslrilvs sganvncqal dkatplfiaa qeghtecvel llssgadsdl
      241 ycnednwqlp ihaaaqmght kildlliplt drvcdtepnk vspvysavfg gheeclemll
      301 qsgyspdaqm clvfgfsspl cmalqknrdf fgivnillky gaqlnelhla yclkyerfsv
      361 fryflkkccp stpwdhisef inhavkaqtk ykewlpslll agfdplnllc sswidsvsdd
      421 iliftleftn wrrlppavek mlsarasnss walqqhiasv pslthlcrle iwsrlklehl
      481 qsdgfirqlp lprslhdyll yaevlrmnev pelaiiqdge isett
//
LOCUS       XP_061011432             483 aa            linear   MAM 02-DEC-2023
DEFINITION  endoplasmic reticulum lectin 1 [Dama dama].
ACCESSION   XP_061011432
VERSION     XP_061011432.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155449.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..483
                     /product="endoplasmic reticulum lectin 1"
                     /calculated_mol_wt=54691
     Region          111..199
                     /region_name="PRKCSH"
                     /note="Glucosidase II beta subunit-like protein;
                     pfam07915"
                     /db_xref="CDD:400321"
     Region          <206..250
                     /region_name="PRKCSH"
                     /note="Glucosidase II beta subunit-like protein; cl06793"
                     /db_xref="CDD:414904"
     Region          342..421
                     /region_name="PRKCSH"
                     /note="Glucosidase II beta subunit-like protein;
                     pfam07915"
                     /db_xref="CDD:400321"
     CDS             1..483
                     /gene="ERLEC1"
                     /coded_by="XM_061155449.1:141..1592"
                     /db_xref="GeneID:133064909"
ORIGIN      
        1 meeggggars lvpggpvllv lcglleasgg gralpqlsdd ipfrvnwpgt efslpttgvl
       61 ykednyvimt tthkekykci lplvasgdee eekdykgpnp relleplfkq sscsyriesy
      121 wtyevchgkh irqyheekes gqkvniheyy lgnmlaknll sekeqekeee ekskeiptkn
      181 iegqmtpyyp vgmgngtpcs lkqnrprsst vmyichpesk heilsvaevt tceyevvilt
      241 pllcnhpkyr fraspvndif cqslpgspfk pltlrqleqq eeilrvpfrr nkeedlqstk
      301 eerfpaihkp iavgsqpmlt vgtthisklt ddqlikefls gsycfhggvg wwkyefcygk
      361 hvhqyhedkd sgktsvvvgt wnqeehiewa kkntarayhl qddgtqtvrm vshfygngdi
      421 cditdkprqv tvklkckesd sphavtvyml ephscqyilg vespvickil dtadenglls
      481 lpn
//
LOCUS       XP_061011433             133 aa            linear   MAM 02-DEC-2023
DEFINITION  neurexin-1 isoform X1 [Dama dama].
ACCESSION   XP_061011433
VERSION     XP_061011433.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155450.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..133
                     /product="neurexin-1 isoform X1"
                     /calculated_mol_wt=14259
     Region          58..>93
                     /region_name="Syndecan"
                     /note="Syndecan domain; pfam01034"
                     /db_xref="CDD:460035"
     Region          78..96
                     /region_name="4.1m"
                     /note="putative band 4.1 homologues' binding motif;
                     smart00294"
                     /db_xref="CDD:128590"
     CDS             1..133
                     /gene="NRXN1"
                     /coded_by="XM_061155450.1:139..540"
                     /db_xref="GeneID:133064910"
ORIGIN      
        1 mgqskttddi lvasaecpsd dedidpceps sanptraggr epypgsaevi resssttgmv
       61 vgivaaaalc ilillyamyk yrnrdegsyh vdesrnyisn saqsngavvk ekqpssakss
      121 nknkknkdke yyv
//
LOCUS       XP_061011434            1492 aa            linear   MAM 02-DEC-2023
DEFINITION  neurexin-1 isoform X2 [Dama dama].
ACCESSION   XP_061011434
VERSION     XP_061011434.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155451.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1492
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1492
                     /product="neurexin-1 isoform X2"
                     /calculated_mol_wt=163829
     Region          30..190
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cd00110"
                     /db_xref="CDD:238058"
     Region          303..434
                     /region_name="LamG"
                     /note="Laminin G domain; smart00282"
                     /db_xref="CDD:214598"
     Region          491..640
                     /region_name="LamG"
                     /note="Laminin G domain; smart00282"
                     /db_xref="CDD:214598"
     Region          668..701
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          734..864
                     /region_name="Laminin_G_2"
                     /note="Laminin G domain; pfam02210"
                     /db_xref="CDD:460494"
     Region          921..1049
                     /region_name="Laminin_G_2"
                     /note="Laminin G domain; pfam02210"
                     /db_xref="CDD:460494"
     Region          1144..1292
                     /region_name="Laminin_G_2"
                     /note="Laminin G domain; pfam02210"
                     /db_xref="CDD:460494"
     Region          1437..1455
                     /region_name="4.1m"
                     /note="putative band 4.1 homologues' binding motif;
                     smart00294"
                     /db_xref="CDD:128590"
     CDS             1..1492
                     /gene="NRXN1"
                     /coded_by="XM_061155451.1:1116..5594"
                     /db_xref="GeneID:133064910"
ORIGIN      
        1 mgtallqrgg cfllclslll lgcwaelgsg lefpgaegqw trfpkwnacc esemsfqlkt
       61 rsarglvlyf ddegfcdfle liltrggrlq lsfsifcaep atlltdtpvn dgawhsvrir
      121 rqfrnttlfi dqveakwvev kskrrdmtvf sglfvgglpp elraaalklt lasvrerepf
      181 kgwirdvrvn sslalpvdsg evklddepps sgggspcegg eegeggvcln ggvcsvvddq
      241 avcdcsrtgf rgkdcsqedn nveglahlmm gdqgkeeyia tfkgseyfcy dlsqnpiqss
      301 sdeitlsfkt lqrnglmlht gksadyvnla lkngavslvi nlgsgafeal vepvngkfnd
      361 nawhdvkvtr nlrqvtisvd giltttgytq edytmlgsdd ffyvggspst adlpgspvsn
      421 nfmgclkevv yknndvrlel srlakqgdpk mkihgvvafk cenvatldpi tfetpesfis
      481 lpkwnakktg sisfdfrtte pnglilfshg kprhqkdakh pqmikvdffa iemldghlyl
      541 lldmgsgtik ikalqkkvnd gewyhvdfqr dgrsgtisvn tlrtpytapg eseildldde
      601 lylgglpenk aglvfptevw tallnygyvg cirdlfidgq skdirqmaev qstagvkpsc
      661 sretakpcls npcknsgmcr dgwnrfvcdc sgtgylgrsc ereatvlsyd gsmfmkiqlp
      721 vvmhteaedv slrfrsqray gilmattsrd sadtlrleld agrvkltvnl dcirincnss
      781 kgpetlfagy nlndnewhtv rvvrrgkslk ltvddqqamt gqmagdhtrl efhnietgii
      841 terrylssvp snfighlqsl tfngmayidl ckngdidyce lnarfgfrni iadpvtfktk
      901 ssyvalatlq aytsmhlffq fkttsldgli lynsgdgndf ivvelvkgyl hyvfdlgnga
      961 nlikgssnkp lndnqwhnvm isrdtsnlht vkidtkittq itagarnldl ksdlyiggva
     1021 ketykslpkl vhakegfqgc lasvdlngrl pdlisdalfc ngqiergceg psttcqedsc
     1081 snqgvclqqw dgfscdcsmt sfsgplcndp gttyifskgg gqitykwppn drpstradrl
     1141 aigfstvqke avlvrvdsss glgdylelhi hqgkigvkfn vgtddiaiee snaiindgky
     1201 hvvrftrsgg natlqvdswp vierypagnn dnerlaiarq ripyrlgrvv dewlldkgrq
     1261 ltifnsqati iiggkeqgqp fqgqlsglyy nglkvlnmaa endaniaivg nvrlvgevps
     1321 smttestata mqsemstsim ettttlatst arrgkpptke pvsqttddil vasaecpsdd
     1381 edidpcepss anptraggre pypgsaevir esssttgmvv givaaaalci lillyamyky
     1441 rnrdegsyhv desrnyisns aqsngavvke kqpssakssn knkknkdkey yv
//
LOCUS       XP_061011435             735 aa            linear   MAM 02-DEC-2023
DEFINITION  stonin-1 isoform X1 [Dama dama].
ACCESSION   XP_061011435
VERSION     XP_061011435.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155452.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..735
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..735
                     /product="stonin-1 isoform X1"
                     /calculated_mol_wt=82882
     Region          399..716
                     /region_name="AP_MHD_Cterm"
                     /note="C-terminal domain of adaptor protein (AP) complexes
                     medium mu subunits and its homologs (MHD); cl10970"
                     /db_xref="CDD:472082"
     CDS             1..735
                     /gene="STON1"
                     /coded_by="XM_061155452.1:149..2356"
                     /db_xref="GeneID:133064911"
ORIGIN      
        1 mcstnpgnwi tfdddptfqs sqksknfple nqgicrpngl klnlsgpkef psgssstsst
       61 plsspiidfy fspgppsnsp lstptkdfpg fpgipkagth vlypipesss nsplitatgs
      121 sslatkptcf sqaslpsdhs cihpaskvgl ademsphqae gfqsdtpqfq yfredcafss
      181 pfwkdeggas qltfdtpgsr kifpsrdkev pmdqkglnqc sfnyicekle ylqsaenqds
      241 fgnlsmqcly aedaassfvp hmlfrsqpka gwsfmmripe kknmmssrqw gpiflkvlpg
      301 gilqmyyekg lekpfkelql dpycrlsepk venfsvagki htvkiehvsy tekrkyhskt
      361 evvhepdieq mlklgsteyh dfldflitve eeliklpavs kpkknyeeqe isleivdnfw
      421 gkitkeegkl vestvitqis clcfvngnte cfltlndhel qkrneryfek dpekkgidil
      481 dchfhkcvka qefeqsriik fvpldacrfe lmrfktshsg edlpfslksv vvvqgayvel
      541 qafvnmahpm svqrpsshas slrscdnimi hfpvpsqwik alwtmnlqrq kslkakmnrr
      601 aclgslhele sepviqvtvg sakyesayra vvwkidrlpd knsspdhphc lsyklelgsd
      661 qeipsdwypf atvqfgildt tasrtevrsl gvesdvqpqk hinhracyni qveiekkwik
      721 idgedpdkag dcvtq
//
LOCUS       XP_061011436             735 aa            linear   MAM 02-DEC-2023
DEFINITION  stonin-1 isoform X1 [Dama dama].
ACCESSION   XP_061011436
VERSION     XP_061011436.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155453.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..735
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..735
                     /product="stonin-1 isoform X1"
                     /calculated_mol_wt=82882
     Region          399..716
                     /region_name="AP_MHD_Cterm"
                     /note="C-terminal domain of adaptor protein (AP) complexes
                     medium mu subunits and its homologs (MHD); cl10970"
                     /db_xref="CDD:472082"
     CDS             1..735
                     /gene="STON1"
                     /coded_by="XM_061155453.1:134..2341"
                     /db_xref="GeneID:133064911"
ORIGIN      
        1 mcstnpgnwi tfdddptfqs sqksknfple nqgicrpngl klnlsgpkef psgssstsst
       61 plsspiidfy fspgppsnsp lstptkdfpg fpgipkagth vlypipesss nsplitatgs
      121 sslatkptcf sqaslpsdhs cihpaskvgl ademsphqae gfqsdtpqfq yfredcafss
      181 pfwkdeggas qltfdtpgsr kifpsrdkev pmdqkglnqc sfnyicekle ylqsaenqds
      241 fgnlsmqcly aedaassfvp hmlfrsqpka gwsfmmripe kknmmssrqw gpiflkvlpg
      301 gilqmyyekg lekpfkelql dpycrlsepk venfsvagki htvkiehvsy tekrkyhskt
      361 evvhepdieq mlklgsteyh dfldflitve eeliklpavs kpkknyeeqe isleivdnfw
      421 gkitkeegkl vestvitqis clcfvngnte cfltlndhel qkrneryfek dpekkgidil
      481 dchfhkcvka qefeqsriik fvpldacrfe lmrfktshsg edlpfslksv vvvqgayvel
      541 qafvnmahpm svqrpsshas slrscdnimi hfpvpsqwik alwtmnlqrq kslkakmnrr
      601 aclgslhele sepviqvtvg sakyesayra vvwkidrlpd knsspdhphc lsyklelgsd
      661 qeipsdwypf atvqfgildt tasrtevrsl gvesdvqpqk hinhracyni qveiekkwik
      721 idgedpdkag dcvtq
//
LOCUS       XP_061011437            1180 aa            linear   MAM 02-DEC-2023
DEFINITION  stonin-1 isoform X2 [Dama dama].
ACCESSION   XP_061011437
VERSION     XP_061011437.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155454.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1180
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1180
                     /product="stonin-1 isoform X2"
                     /calculated_mol_wt=131253
     Region          399..716
                     /region_name="AP_MHD_Cterm"
                     /note="C-terminal domain of adaptor protein (AP) complexes
                     medium mu subunits and its homologs (MHD); cl10970"
                     /db_xref="CDD:472082"
     Region          714..1180
                     /region_name="TFIIA"
                     /note="Transcription factor IIA, alpha/beta subunit;
                     pfam03153"
                     /db_xref="CDD:460829"
     CDS             1..1180
                     /gene="STON1"
                     /coded_by="XM_061155454.1:149..3691"
                     /db_xref="GeneID:133064911"
ORIGIN      
        1 mcstnpgnwi tfdddptfqs sqksknfple nqgicrpngl klnlsgpkef psgssstsst
       61 plsspiidfy fspgppsnsp lstptkdfpg fpgipkagth vlypipesss nsplitatgs
      121 sslatkptcf sqaslpsdhs cihpaskvgl ademsphqae gfqsdtpqfq yfredcafss
      181 pfwkdeggas qltfdtpgsr kifpsrdkev pmdqkglnqc sfnyicekle ylqsaenqds
      241 fgnlsmqcly aedaassfvp hmlfrsqpka gwsfmmripe kknmmssrqw gpiflkvlpg
      301 gilqmyyekg lekpfkelql dpycrlsepk venfsvagki htvkiehvsy tekrkyhskt
      361 evvhepdieq mlklgsteyh dfldflitve eeliklpavs kpkknyeeqe isleivdnfw
      421 gkitkeegkl vestvitqis clcfvngnte cfltlndhel qkrneryfek dpekkgidil
      481 dchfhkcvka qefeqsriik fvpldacrfe lmrfktshsg edlpfslksv vvvqgayvel
      541 qafvnmahpm svqrpsshas slrscdnimi hfpvpsqwik alwtmnlqrq kslkakmnrr
      601 aclgslhele sepviqvtvg sakyesayra vvwkidrlpd knsspdhphc lsyklelgsd
      661 qeipsdwypf atvqfgildt tasrtevrsl gvesdvqpqk hinhracyni qaklyrsvie
      721 dviegvrglf aeegveeqvl kdlkqlwetk llqskatedf frnsvhsplf tlqlphslhq
      781 tlpssaaslv ipagrtlpsf aaaergtsns sasfafpgyp vhvpvgvtqq tapahlykvs
      841 vpfmvtqtse rasvlqhpvq qvfqllgqps iiqtsipqln pcslqattek sprmetvlqq
      901 pivlpsetvd rkhlenptsd ilvapgnerk iiseavlnql vssqyisfpg vvftpqvsqa
      961 dsivepvlrv sarmtqnlpg plstgpqgaq rqhvpeaqpr vlknrmcgcg svkqpgntee
     1021 psslpvsekd sssqmdlsiq vadddineii qiggtgdtss ndeigntrdv dengllgiid
     1081 agdlkvpeee tgsvsnedss vnssdngdle idleedplns gddvseqdvp dlfdmdnviv
     1141 cqydkihrsk dkwkfylkdg vmcfggrdyv fakaignaew
//
LOCUS       XP_061011438             780 aa            linear   MAM 02-DEC-2023
DEFINITION  protein phosphatase 1 regulatory subunit 21 [Dama dama].
ACCESSION   XP_061011438
VERSION     XP_061011438.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155455.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..780
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..780
                     /product="protein phosphatase 1 regulatory subunit 21"
                     /calculated_mol_wt=88337
     Region          <4..226
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          11..111
                     /region_name="KLRAQ"
                     /note="Predicted coiled-coil domain-containing protein;
                     pfam10205"
                     /db_xref="CDD:462996"
     Region          255..771
                     /region_name="TTKRSYEDQ"
                     /note="Predicted coiled-coil domain-containing protein;
                     pfam10212"
                     /db_xref="CDD:463001"
     CDS             1..780
                     /gene="PPP1R21"
                     /coded_by="XM_061155455.1:131..2473"
                     /db_xref="GeneID:133064913"
ORIGIN      
        1 masaelqgky qklaqeyskl raqnqvlkkg vvdeqansaa lkeqlkmkdq slrklqqemd
       61 sltfrnlqla krvellqdel alseprgkkn kksgesssql sqeqksvfde dlqkkieene
      121 rlhiqffead eqhkhveael rsrlstleme aaqhqavvdg ltrkymetie klqndkakle
      181 vksqtlekea kecrlrteec qlqlknlhed lssrleesls iinekvpfnd tkysqynaln
      241 vpvhnrrhql kmrdiagqal afvqdlvkal lnfhtyteqr iqifpidsai dtisplnqkf
      301 sqylhenasy vrpleegmlh lfesitedtv tvlettvklk tfsehltsyi cflrkilpyq
      361 lksleeecda slctsalrar nlelsqdmkk mtavfeklqt yiallalpst epdgllqtny
      421 ssvltnvgaa lhgfhdvmkd iskhysqkat ielelptttq klittndcil ssvvaltnga
      481 gkiasffsnn vdffiaslsy gpktgsgfis plsaecmlqy kkkaaaymka lrkpllesvp
      541 yeealanrrv llsstesreg lsqqvqqsle kiskleqeke hwmleaqlak iklekenqri
      601 adklkstssg qvvglaqeka aevtatgqee astkampepi hstseigilt rtsdseapdv
      661 esredlirnh ymarivelts qlqladsksv hfyaecrals krlalaeksk ealteemkva
      721 sqnisrlqde ltttkrsyed qlsmmsdhlc smnetlskqr eeidtlkmss kgnskknksr
//
LOCUS       XP_061011439             439 aa            linear   MAM 02-DEC-2023
DEFINITION  forkhead box protein N2 [Dama dama].
ACCESSION   XP_061011439
VERSION     XP_061011439.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155456.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..439
                     /product="forkhead box protein N2"
                     /calculated_mol_wt=48152
     Region          111..192
                     /region_name="FH_FOXN2"
                     /note="Forkhead (FH) domain found in Forkhead box protein
                     N2 (FOXN2); cd20058"
                     /db_xref="CDD:410832"
     Site            order(117,135..136,139,158..159,161..162,165,172,183..185,
                     187)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410832"
     CDS             1..439
                     /gene="FOXN2"
                     /coded_by="XM_061155456.1:199..1518"
                     /db_xref="GeneID:133064914"
ORIGIN      
        1 mgpvigmtpe kraetpgaek vaglsqiykm gslpeavdaa rpkatlvdne saddeltnln
       61 wlhestnllt nfsfgseglp ivsplydieg ddvpsfgpsc yqnqekksat skppysfsll
      121 iymaiehspn kclpvkeiys wilnrfpyfa taptgwknsv rhnlslnkcf qkvershgkv
      181 ngkgslwcvd peykpnlmqa lkkqpfssks tfysppaspq saslsphyls svfkqnqvrt
      241 lkesdidaat ammllntsie qgilecekpl plkttmqkkr syssafnhss amrlhesdsl
      301 atstdpkedh nysasslaaq rcasrssvss lssvdevyef ipksshvgsd gsegfrseed
      361 tdvdyeddpl gdsgyasqac adttekgqpd kkmrkqacqe ideelkeaag sllhlagirt
      421 clgslistak tqnqkqrkk
//
LOCUS       XP_061011440             439 aa            linear   MAM 02-DEC-2023
DEFINITION  forkhead box protein N2 [Dama dama].
ACCESSION   XP_061011440
VERSION     XP_061011440.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155457.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..439
                     /product="forkhead box protein N2"
                     /calculated_mol_wt=48152
     Region          111..192
                     /region_name="FH_FOXN2"
                     /note="Forkhead (FH) domain found in Forkhead box protein
                     N2 (FOXN2); cd20058"
                     /db_xref="CDD:410832"
     Site            order(117,135..136,139,158..159,161..162,165,172,183..185,
                     187)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410832"
     CDS             1..439
                     /gene="FOXN2"
                     /coded_by="XM_061155457.1:331..1650"
                     /db_xref="GeneID:133064914"
ORIGIN      
        1 mgpvigmtpe kraetpgaek vaglsqiykm gslpeavdaa rpkatlvdne saddeltnln
       61 wlhestnllt nfsfgseglp ivsplydieg ddvpsfgpsc yqnqekksat skppysfsll
      121 iymaiehspn kclpvkeiys wilnrfpyfa taptgwknsv rhnlslnkcf qkvershgkv
      181 ngkgslwcvd peykpnlmqa lkkqpfssks tfysppaspq saslsphyls svfkqnqvrt
      241 lkesdidaat ammllntsie qgilecekpl plkttmqkkr syssafnhss amrlhesdsl
      301 atstdpkedh nysasslaaq rcasrssvss lssvdevyef ipksshvgsd gsegfrseed
      361 tdvdyeddpl gdsgyasqac adttekgqpd kkmrkqacqe ideelkeaag sllhlagirt
      421 clgslistak tqnqkqrkk
//
LOCUS       XP_061011441             439 aa            linear   MAM 02-DEC-2023
DEFINITION  forkhead box protein N2 [Dama dama].
ACCESSION   XP_061011441
VERSION     XP_061011441.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155458.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..439
                     /product="forkhead box protein N2"
                     /calculated_mol_wt=48152
     Region          111..192
                     /region_name="FH_FOXN2"
                     /note="Forkhead (FH) domain found in Forkhead box protein
                     N2 (FOXN2); cd20058"
                     /db_xref="CDD:410832"
     Site            order(117,135..136,139,158..159,161..162,165,172,183..185,
                     187)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410832"
     CDS             1..439
                     /gene="FOXN2"
                     /coded_by="XM_061155458.1:459..1778"
                     /db_xref="GeneID:133064914"
ORIGIN      
        1 mgpvigmtpe kraetpgaek vaglsqiykm gslpeavdaa rpkatlvdne saddeltnln
       61 wlhestnllt nfsfgseglp ivsplydieg ddvpsfgpsc yqnqekksat skppysfsll
      121 iymaiehspn kclpvkeiys wilnrfpyfa taptgwknsv rhnlslnkcf qkvershgkv
      181 ngkgslwcvd peykpnlmqa lkkqpfssks tfysppaspq saslsphyls svfkqnqvrt
      241 lkesdidaat ammllntsie qgilecekpl plkttmqkkr syssafnhss amrlhesdsl
      301 atstdpkedh nysasslaaq rcasrssvss lssvdevyef ipksshvgsd gsegfrseed
      361 tdvdyeddpl gdsgyasqac adttekgqpd kkmrkqacqe ideelkeaag sllhlagirt
      421 clgslistak tqnqkqrkk
//
LOCUS       XP_061011442            1361 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA mismatch repair protein Msh6 isoform X1 [Dama dama].
ACCESSION   XP_061011442
VERSION     XP_061011442.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155459.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1361
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1361
                     /product="DNA mismatch repair protein Msh6 isoform X1"
                     /calculated_mol_wt=152644
     Region          90..193
                     /region_name="PWWP_MSH6"
                     /note="PWWP domain found in DNA mismatch repair protein
                     MSH6 and similar proteins; cd05837"
                     /db_xref="CDD:438962"
     Site            order(103,106,133)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438962"
     Site            104..107
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438962"
     Region          407..1361
                     /region_name="MutS"
                     /note="DNA mismatch repair ATPase MutS [Replication,
                     recombination and repair]; COG0249"
                     /db_xref="CDD:440019"
     CDS             1..1361
                     /gene="MSH6"
                     /coded_by="XM_061155459.1:83..4168"
                     /db_xref="GeneID:133064916"
ORIGIN      
        1 msrqstlysf fpkspavnna nkapvrassg ssaaaaatra spspggdaaw seagpeplag
       61 ttsraearnl ngglrksasp avpassscdf spgdlvwakm egypwwpclv ynhpfdgtfi
      121 rekgksarvh vqffddsptr gwvsrrllkp ytgshskeaq kgghfysakp eilramqrad
      181 ealnkdkikr lelavcdeps epeeeeetev gapytsdkse eendieseee vrpkvqgsrr
      241 ssrqikkrrv isdsesdmgg sdvefkpdtk eeassdemss gvgdsdsegl dspvkvapkr
      301 krmvtgngsl krkssrkemp satkratgis setkntlsaf sapqnsesqa hisggcddsn
      361 rptvwyhetl ewlkeekrrd vhrrrpdhpd fdastlyvpe dflnsctpgm rkwwqiksqn
      421 fdlvifykvg kfyemyhmda ligvselglv fmkgnwahsg fpeiafgrys dslvqkgykv
      481 arveqtetpe mmearcrkma hiskydrvvr reicriitkg tqtysvlegd psenyskyll
      541 slkekeeess ghtrvygvcf vdtslgrffi gqfsddrhcs rfrtlvahyp pvqvlfekgn
      601 lsmetkmilk sslssslqeg lipgsqfwda aktlrtllee gyfadklnee ggvmlpqvlk
      661 gmtsesdsig ltpgersela lsalggcvfy lkkclidqel lsmanfeeyv pldsdmvhat
      721 rpgavfakan qrmvldavtl nnleiflngt ngstegtlle kidtchtpfg krllkqwlca
      781 plcnphaind rldaiedlmv vpdkisevvd llkklpdler llskihnvgs plksqnhpds
      841 raimyeetty skkkiidfls alegfkvick iiglmeevid dfkskilkqv ltlqtknpkg
      901 rfpdltseln rwdtafdhek arktglitpk agfdsdydqa ladireneqs lleylekqrs
      961 rigcrtivyw gigrnryqle ipenfitrnl peeyelkstk kgckrywtkt iekklanlin
     1021 aeerrdaslk dcmrrlfynf dknykdwqaa vecisvldvl lcltnysrgg dgpmcrpiil
     1081 lpeedtppfl dlkgsrhpci tktffgddfi pndiligcee eeeengkayc vlvtgpnmgg
     1141 kstlmrqagl laimaqmgcy vpaevcrltp idrvftrlga sdrimsgest ffvelsetas
     1201 ilthatahsl vlvdelgrgt atfdgtaian avvkelaeni kcrtlfsthy hslvedysqn
     1261 vavrlghmac mvenecedps qetitflykf ikgacpksyg fnaarlanlp eeviqkghrk
     1321 arefekmtqs lrlfrevcla serstvdaea vhklltliee l
//
LOCUS       XP_061011443            1360 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA mismatch repair protein Msh6 isoform X2 [Dama dama].
ACCESSION   XP_061011443
VERSION     XP_061011443.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155460.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1360
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1360
                     /product="DNA mismatch repair protein Msh6 isoform X2"
                     /calculated_mol_wt=152557
     Region          89..192
                     /region_name="PWWP_MSH6"
                     /note="PWWP domain found in DNA mismatch repair protein
                     MSH6 and similar proteins; cd05837"
                     /db_xref="CDD:438962"
     Site            order(102,105,132)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438962"
     Site            103..106
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438962"
     Region          406..1360
                     /region_name="MutS"
                     /note="DNA mismatch repair ATPase MutS [Replication,
                     recombination and repair]; COG0249"
                     /db_xref="CDD:440019"
     CDS             1..1360
                     /gene="MSH6"
                     /coded_by="XM_061155460.1:83..4165"
                     /db_xref="GeneID:133064916"
ORIGIN      
        1 msrqstlysf fpkspavnna nkapvrassg ssaaaaatra spspggdaaw seagpeplag
       61 ttsraearnl ngglrksasp avpasscdfs pgdlvwakme gypwwpclvy nhpfdgtfir
      121 ekgksarvhv qffddsptrg wvsrrllkpy tgshskeaqk gghfysakpe ilramqrade
      181 alnkdkikrl elavcdepse peeeeetevg apytsdksee endieseeev rpkvqgsrrs
      241 srqikkrrvi sdsesdmggs dvefkpdtke eassdemssg vgdsdsegld spvkvapkrk
      301 rmvtgngslk rkssrkemps atkratgiss etkntlsafs apqnsesqah isggcddsnr
      361 ptvwyhetle wlkeekrrdv hrrrpdhpdf dastlyvped flnsctpgmr kwwqiksqnf
      421 dlvifykvgk fyemyhmdal igvselglvf mkgnwahsgf peiafgrysd slvqkgykva
      481 rveqtetpem mearcrkmah iskydrvvrr eicriitkgt qtysvlegdp senyskylls
      541 lkekeeessg htrvygvcfv dtslgrffig qfsddrhcsr frtlvahypp vqvlfekgnl
      601 smetkmilks slssslqegl ipgsqfwdaa ktlrtlleeg yfadklneeg gvmlpqvlkg
      661 mtsesdsigl tpgerselal salggcvfyl kkclidqell smanfeeyvp ldsdmvhatr
      721 pgavfakanq rmvldavtln nleiflngtn gstegtllek idtchtpfgk rllkqwlcap
      781 lcnphaindr ldaiedlmvv pdkisevvdl lkklpdlerl lskihnvgsp lksqnhpdsr
      841 aimyeettys kkkiidflsa legfkvicki iglmeevidd fkskilkqvl tlqtknpkgr
      901 fpdltselnr wdtafdheka rktglitpka gfdsdydqal adireneqsl leylekqrsr
      961 igcrtivywg igrnryqlei penfitrnlp eeyelkstkk gckrywtkti ekklanlina
     1021 eerrdaslkd cmrrlfynfd knykdwqaav ecisvldvll cltnysrggd gpmcrpiill
     1081 peedtppfld lkgsrhpcit ktffgddfip ndiligceee eeengkaycv lvtgpnmggk
     1141 stlmrqagll aimaqmgcyv paevcrltpi drvftrlgas drimsgestf fvelsetasi
     1201 lthatahslv lvdelgrgta tfdgtaiana vvkelaenik crtlfsthyh slvedysqnv
     1261 avrlghmacm venecedpsq etitflykfi kgacpksygf naarlanlpe eviqkghrka
     1321 refekmtqsl rlfrevclas erstvdaeav hklltlieel
//
LOCUS       XP_061011444            1321 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA mismatch repair protein Msh6 isoform X3 [Dama dama].
ACCESSION   XP_061011444
VERSION     XP_061011444.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155461.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1321
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1321
                     /product="DNA mismatch repair protein Msh6 isoform X3"
                     /calculated_mol_wt=148250
     Region          89..192
                     /region_name="PWWP_MSH6"
                     /note="PWWP domain found in DNA mismatch repair protein
                     MSH6 and similar proteins; cd05837"
                     /db_xref="CDD:438962"
     Site            order(102,105,132)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438962"
     Site            103..106
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438962"
     Region          406..1254
                     /region_name="MutS"
                     /note="DNA mismatch repair ATPase MutS [Replication,
                     recombination and repair]; COG0249"
                     /db_xref="CDD:440019"
     CDS             1..1321
                     /gene="MSH6"
                     /coded_by="XM_061155461.1:83..4048"
                     /db_xref="GeneID:133064916"
ORIGIN      
        1 msrqstlysf fpkspavnna nkapvrassg ssaaaaatra spspggdaaw seagpeplag
       61 ttsraearnl ngglrksasp avpasscdfs pgdlvwakme gypwwpclvy nhpfdgtfir
      121 ekgksarvhv qffddsptrg wvsrrllkpy tgshskeaqk gghfysakpe ilramqrade
      181 alnkdkikrl elavcdepse peeeeetevg apytsdksee endieseeev rpkvqgsrrs
      241 srqikkrrvi sdsesdmggs dvefkpdtke eassdemssg vgdsdsegld spvkvapkrk
      301 rmvtgngslk rkssrkemps atkratgiss etkntlsafs apqnsesqah isggcddsnr
      361 ptvwyhetle wlkeekrrdv hrrrpdhpdf dastlyvped flnsctpgmr kwwqiksqnf
      421 dlvifykvgk fyemyhmdal igvselglvf mkgnwahsgf peiafgrysd slvqkgykva
      481 rveqtetpem mearcrkmah iskydrvvrr eicriitkgt qtysvlegdp senyskylls
      541 lkekeeessg htrvygvcfv dtslgrffig qfsddrhcsr frtlvahypp vqvlfekgnl
      601 smetkmilks slssslqegl ipgsqfwdaa ktlrtlleeg yfadklneeg gvmlpqvlkg
      661 mtsesdsigl tpgerselal salggcvfyl kkclidqell smanfeeyvp ldsdmvhatr
      721 pgavfakanq rmvldavtln nleiflngtn gstegtllek idtchtpfgk rllkqwlcap
      781 lcnphaindr ldaiedlmvv pdkisevvdl lkklpdlerl lskihnvgsp lksqnhpdsr
      841 aimyeettys kkkiidflsa legfkvicki iglmeevidd fkskilkqvl tlqtknpkgr
      901 fpdltselnr wdtafdheka rktglitpka gfdsdydqal adireneqsl leylekqrsr
      961 igcrtivywg igrnryqlei penfitrnlp eeyelkstkk gckrywtkti ekklanlina
     1021 eerrdaslkd cmrrlfynfd knykdwqaav ecisvldvll cltnysrggd gpmcrpiill
     1081 peedtppfld lkgsrhpcit ktffgddfip ndiligceee eeengkaycv lvtgpnmggk
     1141 stlmrqagll aimaqmgcyv paevcrltpi drvftrlgas drimsgestf fvelsetasi
     1201 lthatahslv lvdelgrgta tfdgtaiana vvkelaenik crtlfsthyh slvedysqnv
     1261 avrlghmkms vkiparrllp ssinslrgpv lkamalmqpg llifqrrlfk rdiekqenlr
     1321 r
//
LOCUS       XP_061011445             926 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box only protein 11 [Dama dama].
ACCESSION   XP_061011445
VERSION     XP_061011445.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155462.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..926
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..926
                     /product="F-box only protein 11"
                     /calculated_mol_wt=103276
     Region          155..199
                     /region_name="F-box_FBXO11"
                     /note="F-box domain found in F-box only protein 11
                     (FBXO11) and similar proteins; cd22091"
                     /db_xref="CDD:438863"
     Site            order(158,162,165..166,169..170,174,176..177,181..183,185)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438863"
     Region          330..496
                     /region_name="Beta_helix"
                     /note="Right handed beta helix region; pfam13229"
                     /db_xref="CDD:463811"
     Region          433..588
                     /region_name="Beta_helix"
                     /note="Right handed beta helix region; pfam13229"
                     /db_xref="CDD:463811"
     Region          525..680
                     /region_name="Beta_helix"
                     /note="Right handed beta helix region; pfam13229"
                     /db_xref="CDD:463811"
     Region          663..818
                     /region_name="Beta_helix"
                     /note="Right handed beta helix region; pfam13229"
                     /db_xref="CDD:463811"
     Region          834..902
                     /region_name="UBR-box_UBR6_FBXO11"
                     /note="UBR-box found in F-box only protein 11 (FBXO11) and
                     similar proteins; cd19676"
                     /db_xref="CDD:439074"
     Site            order(847,850..851,861..864,866..867,869,871..874,
                     877..879,884,886..889,898..900)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:439074"
     Site            order(847,852,855,864,867,871..872,875,882,887,889,898)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:439074"
     CDS             1..926
                     /gene="FBXO11"
                     /coded_by="XM_061155462.1:121..2901"
                     /db_xref="GeneID:133064918"
ORIGIN      
        1 mnsvraanrr prrvsrprpv qqqqqqppqq pppqppqqqp pqqqpppppq qqqqpppppp
       61 pppplpqern nagerdddvp admvaeesgp gaqnspyqlr rktllpkrta cptkssmega
      121 ststtenffg hrakrarvsg ksqdlsaapa eqylqeklpd evvlkifsyl leqdlcraac
      181 vckrfselan dpilwkrlym evfeytrpmm hpepgkfyqi npeeyehpnp wkesfqqlyk
      241 gahvkpgfae hfysnparyk grenmlyydt iedalggvqe ahfdglifvh sgiytdewiy
      301 iespitmiga apgkvadkvi ientrdstfv fmegsedayv gymtirfnpd dksaqhhnah
      361 hcleitvncs piidhciirs tctvgsavcv sgqgacptik hcnisdcenv glyitdhaqg
      421 iyedneisnn alagiwvknh gnpiirrnhi hhgrdvgvft fdhgmgyfes cnihrnriag
      481 fevkayanpt vvrceihhgq tggiyvhekg rgqfienkiy annfagvwit snsdptirgn
      541 sifngnqggv yifgdgrgli egndiygnal agiqirtnsc pivrhnkihd gqhggiyvhe
      601 kgqgvieene vysntlagvw vttgstpvlr rnrihsgkqv gvyfydnghg vledndiynh
      661 mysgvqirtg snpkirrnki wggqnggilv ynsglgcied neifdnamag vwiktdsnpt
      721 lrrnkihdgr dggicifngg rglleendif rnaqagvlis tnshpvlrkn rifdgfaagi
      781 eitnhatatl egnqifnnrf gglflasgvn vtmkdnkimn nqdaiekavs rgqclykiss
      841 ytsypmhdfy rchtcnttdr naicvncikk chqghdvefi rhdrffcdcg agtlsnpctl
      901 agepthdtdt lydsappies ntlqhn
//
LOCUS       XP_061011446             430 aa            linear   MAM 02-DEC-2023
DEFINITION  potassium channel subfamily K member 12 [Dama dama].
ACCESSION   XP_061011446
VERSION     XP_061011446.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155463.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..430
                     /product="potassium channel subfamily K member 12"
                     /calculated_mol_wt=46790
     Region          100..169
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     Region          222..304
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     CDS             1..430
                     /gene="KCNK12"
                     /coded_by="XM_061155463.1:67..1359"
                     /db_xref="GeneID:133064920"
ORIGIN      
        1 mssrsprppp rrcrrrlprp sccccccrrs hlnedtgrfv llaaliglyl vagatvfsal
       61 espgeaeara rwgatlrnfs aahgvaepel raflrhyeaa laagvradal rprwdfpgaf
      121 yfvgtvvsti gfgmttpatv ggkafliayg lfgcagtilf fnlfleriis llafimracr
      181 erqlrrsgll patfrrgsal seadclagwk psvyhvllil glfavllscc asamytsveg
      241 wdyvdslyfc fvtfstigfg dlvssqhaay rnqglyrlgn flfillgvcc iyslfnvisi
      301 likqvlnwml rklscrccar ccpapgapla rrnaitpgsr lrrrlaalga dpaardsdae
      361 grrlsgelis mrdltasnkv slallqkqls etangyprsv cvntrqngfs ggvgalgimn
      421 nrlaetsasr
//
LOCUS       XP_061011447             934 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA mismatch repair protein Msh2 [Dama dama].
ACCESSION   XP_061011447
VERSION     XP_061011447.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155464.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..934
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..934
                     /product="DNA mismatch repair protein Msh2"
                     /calculated_mol_wt=104667
     Region          18..132
                     /region_name="MutS_I"
                     /note="MutS domain I; pfam01624"
                     /db_xref="CDD:426350"
     Region          160..853
                     /region_name="MutS"
                     /note="DNA mismatch repair ATPase MutS [Replication,
                     recombination and repair]; COG0249"
                     /db_xref="CDD:440019"
     CDS             1..934
                     /gene="MSH2"
                     /coded_by="XM_061155464.1:68..2872"
                     /db_xref="GeneID:133064921"
ORIGIN      
        1 mavqpkdtlq lesaaevgfv rffqgmpekp tttvrlfdrg dfytahreda llaarevfkt
       61 qgvvkymgpa gaktlesvvl skmnfesfvk dlllvrqyrv evyknragnk askendwyla
      121 fkaspgnlsq fedilfgnnd msasigvvgv kmstvdgqrq igvgyvdstq rklglcefpd
      181 ndqfsnleal liqigpkecv mpggetagdv gklrqviqrg giliterkra dfstkdiyqd
      241 lnrllkgkkg eqmnsavlpe menqvavssl savikflell sddsnfgqfe lttfdfsqym
      301 kldiaavral nlfqgsvedt sgsqslaall nkcktpqgqr lvnqwikqpl mdknrieerl
      361 nlveafveda elrqslqedl lrrfpdlnrl akkfqrqaan lqdcyrlyqg vnqlpnviqa
      421 lekyegkhqa lllavfvtpl idlrsdfskf qemiettldm dqvenheflv kpsfdpnlse
      481 lreimddlek kmqstlisaa rdlgldpgkq ikldsstqfg yyfrvtckee kvlrnnknfs
      541 tvdiqkngvk ftnskltsln eeytknktey eeaqnaivke ivnissgyve pmqtlndvla
      601 qldavvsfah vsnaapvpyv rpvilekgrg ritlkasrha cvevqdevaf ipndvhfekd
      661 kqmfhiitgp nmggkstyir qtgvvvlmaq igcfvpcewa evsivdcila rvgagdsqlk
      721 gvstfmaeml etasilrsat kdsliiidel grgtstydgf glawaiseyi atkigafcmf
      781 athfheltal anqiptvnnl hvtaltteet ltmlyqvkkg vcdqsfgihv aelanfprhv
      841 iecakqkale leefqnigkp qecdglepaa krcylereqg ekiiqeflsk vkqvpftems
      901 eesitrklkq lkaeviaknn sfvneiisri kvta
//
LOCUS       XP_061011448             314 aa            linear   MAM 02-DEC-2023
DEFINITION  epithelial cell adhesion molecule isoform X1 [Dama dama].
ACCESSION   XP_061011448
VERSION     XP_061011448.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155465.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..314
                     /product="epithelial cell adhesion molecule isoform X1"
                     /calculated_mol_wt=35059
     Region          29..61
                     /region_name="EpCAM_N"
                     /note="Epithelial cell adhesion molecule N-terminal
                     domain; pfam18635"
                     /db_xref="CDD:465828"
     Region          66..135
                     /region_name="Thyroglobulin_1"
                     /note="Thyroglobulin type-1 repeat; pfam00086"
                     /db_xref="CDD:459665"
     Site            order(70,94,112,115)
                     /site_type="active"
                     /note="protease interaction site [active]"
                     /db_xref="CDD:238114"
     CDS             1..314
                     /gene="EPCAM"
                     /coded_by="XM_061155465.1:223..1167"
                     /db_xref="GeneID:133064922"
ORIGIN      
        1 malrqalafw llvaaamaav aaaqqgcvce nyklttncsm naygqcqcis vgtqhsvict
       61 klaakclvmk aemshsksgr rrkpegaiqn ndglydpecd dkglfkakqc ngtstcwcvn
      121 tagvrrtdkd seiscsepvr tywiiielkh ktrekpydlq slqsalkevi tsryqldpky
      181 itnilyendv itidlvqnst qktqndvdia dvayyfekdv kdeslfqskr mdlkvngell
      241 dldpsrtsiy yvdekppefs mqglqagiia vivvvvvaii agiivlvvsr kkrmakyeka
      301 eikemgemhr elna
//
LOCUS       XP_061011449             295 aa            linear   MAM 02-DEC-2023
DEFINITION  epithelial cell adhesion molecule isoform X2 [Dama dama].
ACCESSION   XP_061011449
VERSION     XP_061011449.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155466.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..295
                     /product="epithelial cell adhesion molecule isoform X2"
                     /calculated_mol_wt=32675
     Region          29..61
                     /region_name="EpCAM_N"
                     /note="Epithelial cell adhesion molecule N-terminal
                     domain; pfam18635"
                     /db_xref="CDD:465828"
     Region          66..135
                     /region_name="Thyroglobulin_1"
                     /note="Thyroglobulin type-1 repeat; pfam00086"
                     /db_xref="CDD:459665"
     Site            order(70,94,112,115)
                     /site_type="active"
                     /note="protease interaction site [active]"
                     /db_xref="CDD:238114"
     CDS             1..295
                     /gene="EPCAM"
                     /coded_by="XM_061155466.1:224..1111"
                     /db_xref="GeneID:133064922"
ORIGIN      
        1 malrqalafw llvaaamaav aaaqqgcvce nyklttncsm naygqcqcis vgtqhsvict
       61 klaakclvmk aemshsksgr rrkpegaiqn ndglydpecd dkglfkakqc ngtstcwcvn
      121 tagvrrtdkd seiscsepvr tywiiielkh ktrekpydlq slqsalkevi tsryqldpky
      181 itnilyendv itidlvqnst qktqndvdia dvayyfekdv kdeslfqskr mdlkvngell
      241 dldpsrtsiy yvdekppefs mqglqagiia vivvvvvaii agiivlstlr skkgc
//
LOCUS       XP_061011450             858 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 7A isoform X1 [Dama dama].
ACCESSION   XP_061011450
VERSION     XP_061011450.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155467.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..858
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..858
                     /product="tetratricopeptide repeat protein 7A isoform X1"
                     /calculated_mol_wt=95629
     Region          1..403
                     /region_name="TTC7_N"
                     /note="Tetratricopeptide repeat protein 7 N-terminal;
                     pfam19440"
                     /db_xref="CDD:466084"
     Region          367..628
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          710..>847
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          712..739
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          747..773
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(749..750,753..754,756,780,783..784,787..788,
                     790..791,814,817..818,821..822,825)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          778..808
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          813..841
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..858
                     /gene="TTC7A"
                     /coded_by="XM_061155467.1:75..2651"
                     /db_xref="GeneID:133064924"
ORIGIN      
        1 maakgaygsh lkmeselerc raeghwdrvp elvrqmqalv mlgggggrrg spsagftsld
       61 tddlgkllla ealleqclkg nhaaikdsip lleknepkmn earnhlssil nhgklppqyl
      121 ceamlilgkl hyvegsyrda ismyaragid dmsmenkply qmrllaeafv ikglslerlp
      181 nsiasrprlt ereeevitcf eraswiaqvf lqelekvtsn ttsrhlkgsh pvdyeltyfl
      241 eaalqsayvt nlkkgnivkg mrelrevlrt vetkatqnfk vmaakhlagv llhslseecy
      301 wsplsqplpe fmskeensfi tqalrkphly egdnlycpkd nieealllll isesmatrdv
      361 vlsrapeqeq dravslqnaa aiydllsitl grrgqyvmls ecleramkfa fgefhlwyqv
      421 alsmvacgks syavsllrec vklrpsdptv plmaakvcig slhwleeaer fammvihlge
      481 eagdflskgy lalgltyslq atdatlkskq delhrkalqm leraqqlapg dpqvilyvsl
      541 qlalvrqiss ameqlqealk vckddanalh llallfsaqk hyqhaldvin maiteypenf
      601 nlmftkvkle qvlkgpeeal vtcrqmlrlw qtlysfsqlg glekdgslge gltlkkqsgm
      661 hltlpdahda dsgsrrassi aasrleeams eltvpssvlk qgpmqlwttl eqiwlqaael
      721 fmeqqhlkea gfciqeaagl fptshsvlym rgrlaemkgr lveakqlyke altvnpdgvr
      781 imhslglmls rlghqslaqk vlrdaverqs tcheawqglg evlqaqgqse aaadcfltal
      841 eleasspvlp fsiiprel
//
LOCUS       XP_061011451             701 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 7A isoform X2 [Dama dama].
ACCESSION   XP_061011451
VERSION     XP_061011451.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155468.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..701
                     /product="tetratricopeptide repeat protein 7A isoform X2"
                     /calculated_mol_wt=78439
     Region          <2..246
                     /region_name="TTC7_N"
                     /note="Tetratricopeptide repeat protein 7 N-terminal;
                     pfam19440"
                     /db_xref="CDD:466084"
     Region          210..471
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          553..>690
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          555..582
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          590..616
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(592..593,596..597,599,623,626..627,630..631,
                     633..634,657,660..661,664..665,668)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          621..651
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          656..684
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..701
                     /gene="TTC7A"
                     /coded_by="XM_061155468.1:365..2470"
                     /db_xref="GeneID:133064924"
ORIGIN      
        1 marslrfgsp wwvieglsle rlpnsiasrp rltereeevi tcferaswia qvflqelekv
       61 tsnttsrhlk gshpvdyelt yfleaalqsa yvtnlkkgni vkgmrelrev lrtvetkatq
      121 nfkvmaakhl agvllhslse ecywsplsqp lpefmskeen sfitqalrkp hlyegdnlyc
      181 pkdnieeall lllisesmat rdvvlsrape qeqdravslq naaaiydlls itlgrrgqyv
      241 mlsecleram kfafgefhlw yqvalsmvac gkssyavsll recvklrpsd ptvplmaakv
      301 cigslhwlee aerfammvih lgeeagdfls kgylalglty slqatdatlk skqdelhrka
      361 lqmleraqql apgdpqvily vslqlalvrq issameqlqe alkvckddan alhllallfs
      421 aqkhyqhald vinmaiteyp enfnlmftkv kleqvlkgpe ealvtcrqml rlwqtlysfs
      481 qlgglekdgs lgegltlkkq sgmhltlpda hdadsgsrra ssiaasrlee amseltvpss
      541 vlkqgpmqlw ttleqiwlqa aelfmeqqhl keagfciqea aglfptshsv lymrgrlaem
      601 kgrlveakql ykealtvnpd gvrimhslgl mlsrlghqsl aqkvlrdave rqstcheawq
      661 glgevlqaqg qseaaadcfl taleleassp vlpfsiipre l
//
LOCUS       XP_061011452             598 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 7A isoform X3 [Dama dama].
ACCESSION   XP_061011452
VERSION     XP_061011452.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155469.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..598
                     /product="tetratricopeptide repeat protein 7A isoform X3"
                     /calculated_mol_wt=66659
     Region          <4..143
                     /region_name="TTC7_N"
                     /note="Tetratricopeptide repeat protein 7 N-terminal;
                     pfam19440"
                     /db_xref="CDD:466084"
     Region          107..368
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          450..>587
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          452..479
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          487..513
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(489..490,493..494,496,520,523..524,527..528,
                     530..531,554,557..558,561..562,565)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          518..548
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          553..581
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..598
                     /gene="TTC7A"
                     /coded_by="XM_061155469.1:157..1953"
                     /db_xref="GeneID:133064924"
ORIGIN      
        1 mrelrevlrt vetkatqnfk vmaakhlagv llhslseecy wsplsqplpe fmskeensfi
       61 tqalrkphly egdnlycpkd nieealllll isesmatrdv vlsrapeqeq dravslqnaa
      121 aiydllsitl grrgqyvmls ecleramkfa fgefhlwyqv alsmvacgks syavsllrec
      181 vklrpsdptv plmaakvcig slhwleeaer fammvihlge eagdflskgy lalgltyslq
      241 atdatlkskq delhrkalqm leraqqlapg dpqvilyvsl qlalvrqiss ameqlqealk
      301 vckddanalh llallfsaqk hyqhaldvin maiteypenf nlmftkvkle qvlkgpeeal
      361 vtcrqmlrlw qtlysfsqlg glekdgslge gltlkkqsgm hltlpdahda dsgsrrassi
      421 aasrleeams eltvpssvlk qgpmqlwttl eqiwlqaael fmeqqhlkea gfciqeaagl
      481 fptshsvlym rgrlaemkgr lveakqlyke altvnpdgvr imhslglmls rlghqslaqk
      541 vlrdaverqs tcheawqglg evlqaqgqse aaadcfltal eleasspvlp fsiiprel
//
LOCUS       XP_061011453             164 aa            linear   MAM 02-DEC-2023
DEFINITION  calmodulin-2 isoform X1 [Dama dama].
ACCESSION   XP_061011453
VERSION     XP_061011453.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155470.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..164
                     /product="calmodulin-2 isoform X1"
                     /calculated_mol_wt=18470
     Region          16..164
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..164
                     /gene="CALM2"
                     /coded_by="XM_061155470.1:60..554"
                     /db_xref="GeneID:133064925"
ORIGIN      
        1 mstdeghmrn repcysadql teeqiaefke afslfdkdgd gtittkelgt vmrslgqnpt
       61 eaelqdmine vdadgngtid fpefltmmar kmkdtdseee ireafrvfdk dgngyisaae
      121 lrhvmtnlge kltdeevdem ireadidgdg qvnyeefvqm mtak
//
LOCUS       XP_061011454             149 aa            linear   MAM 02-DEC-2023
DEFINITION  calmodulin-2 isoform X2 [Dama dama].
ACCESSION   XP_061011454
VERSION     XP_061011454.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155471.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..149
                     /product="calmodulin-2 isoform X2"
                     /calculated_mol_wt=16706
     Region          1..149
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..149
                     /gene="CALM2"
                     /coded_by="XM_061155471.1:120..569"
                     /db_xref="GeneID:133064925"
ORIGIN      
        1 madqlteeqi aefkeafslf dkdgdgtitt kelgtvmrsl gqnpteaelq dminevdadg
       61 ngtidfpefl tmmarkmkdt dseeeireaf rvfdkdgngy isaaelrhvm tnlgekltde
      121 evdemiread idgdgqvnye efvqmmtak
//
LOCUS       XP_061011455             145 aa            linear   MAM 02-DEC-2023
DEFINITION  multiple coagulation factor deficiency protein 2 isoform X1 [Dama
            dama].
ACCESSION   XP_061011455
VERSION     XP_061011455.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155472.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..145
                     /product="multiple coagulation factor deficiency protein 2
                     isoform X1"
                     /calculated_mol_wt=16209
     Region          77..142
                     /region_name="EF-hand_7"
                     /note="EF-hand domain pair; pfam13499"
                     /db_xref="CDD:463900"
     CDS             1..145
                     /gene="MCFD2"
                     /coded_by="XM_061155472.1:129..566"
                     /db_xref="GeneID:133064926"
ORIGIN      
        1 mrslrllrip flcgllwafg vpgaraeepg assshhgsmg ldkstvhdqe himehlegvi
       61 nkpeaemspq elqlhyfkmh dydgnnlldg lelstaithv hkeegneqtp mnedelinli
      121 dgvlrdddkn ndgyidyaef akslq
//
LOCUS       XP_061011456              93 aa            linear   MAM 02-DEC-2023
DEFINITION  multiple coagulation factor deficiency protein 2 isoform X2 [Dama
            dama].
ACCESSION   XP_061011456
VERSION     XP_061011456.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155473.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..93
                     /product="multiple coagulation factor deficiency protein 2
                     isoform X2"
                     /calculated_mol_wt=10558
     Region          25..90
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cl08302"
                     /db_xref="CDD:415501"
     Site            order(29,31,33,40,76,78,80,87)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238008"
     CDS             1..93
                     /gene="MCFD2"
                     /coded_by="XM_061155473.1:107..388"
                     /db_xref="GeneID:133064926"
ORIGIN      
        1 mehlegvink peaemspqel qlhyfkmhdy dgnnlldgle lstaithvhk eegneqtpmn
       61 edelinlidg vlrdddknnd gyidyaefak slq
//
LOCUS       XP_061011457             536 aa            linear   MAM 02-DEC-2023
DEFINITION  suppressor of cytokine signaling 5 [Dama dama].
ACCESSION   XP_061011457
VERSION     XP_061011457.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155474.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..536
                     /product="suppressor of cytokine signaling 5"
                     /calculated_mol_wt=61125
     Region          145..193
                     /region_name="SOCS"
                     /note="Suppressor of cytokine signalling; pfam12610"
                     /db_xref="CDD:432667"
     Region          370..470
                     /region_name="SH2"
                     /note="Src homology 2 (SH2) domain; cl15255"
                     /db_xref="CDD:472789"
     Site            order(388,406,427,429)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198173"
     Site            order(428,458)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198173"
     Region          479..534
                     /region_name="SOCS_SOCS5"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     SOCS5-like proteins. Together with CIS1, the CIS/SOCS
                     family of proteins is characterized by the presence of a
                     C-terminal SOCS box and a central SH2 domain. SOCS5
                     inhibits Th2 differentiation by inhibiting...; cd03739"
                     /db_xref="CDD:239708"
     Site            order(480..485,491,498,504,509)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239708"
     CDS             1..536
                     /gene="SOCS5"
                     /coded_by="XM_061155474.1:239..1849"
                     /db_xref="GeneID:133064927"
ORIGIN      
        1 mdkvgkmwnn fkyrcqnlfg hdggsrsenv dmnsnrclsv keknislgds apqqqssplr
       61 envalqlgls psknssrrnq ncateipqiv eisiekdnds cvtpgtrlar rdsysrhapw
      121 ggkkkhscst ktqssldtdk kfgrtrsglq rrerrygvss vhdmdsvssr tvgsrslrqr
      181 lqdtvglcfp mrtynkqskp lfsnkrkihl selmlekcpf pagsdlaqkw hlikqhtapv
      241 sphstffdtf dpslvstede edrlrerrrl sieegvdppp naqihtfeat aqvnplyklg
      301 pklapgmtei ngdssvipqa ncdseedttt lclqsrrqkq rqvsgdshah vsrqgawkvh
      361 tqidyihclv pdllqitgnp cywgvmdrye aeallegkpe gtfllrdsaq edylfsvsfr
      421 rynrslhari eqwnhnfsfd ahdpcvfhss tvtgllehyk dpsscmffep lltislnrtf
      481 pfslqyicra vicrcttydg idglplpsml qdflkeyhyk qkvrvrwler epvkak
//
LOCUS       XP_061011458             536 aa            linear   MAM 02-DEC-2023
DEFINITION  suppressor of cytokine signaling 5 [Dama dama].
ACCESSION   XP_061011458
VERSION     XP_061011458.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155475.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..536
                     /product="suppressor of cytokine signaling 5"
                     /calculated_mol_wt=61125
     Region          145..193
                     /region_name="SOCS"
                     /note="Suppressor of cytokine signalling; pfam12610"
                     /db_xref="CDD:432667"
     Region          370..470
                     /region_name="SH2"
                     /note="Src homology 2 (SH2) domain; cl15255"
                     /db_xref="CDD:472789"
     Site            order(388,406,427,429)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198173"
     Site            order(428,458)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198173"
     Region          479..534
                     /region_name="SOCS_SOCS5"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     SOCS5-like proteins. Together with CIS1, the CIS/SOCS
                     family of proteins is characterized by the presence of a
                     C-terminal SOCS box and a central SH2 domain. SOCS5
                     inhibits Th2 differentiation by inhibiting...; cd03739"
                     /db_xref="CDD:239708"
     Site            order(480..485,491,498,504,509)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239708"
     CDS             1..536
                     /gene="SOCS5"
                     /coded_by="XM_061155475.1:182..1792"
                     /db_xref="GeneID:133064927"
ORIGIN      
        1 mdkvgkmwnn fkyrcqnlfg hdggsrsenv dmnsnrclsv keknislgds apqqqssplr
       61 envalqlgls psknssrrnq ncateipqiv eisiekdnds cvtpgtrlar rdsysrhapw
      121 ggkkkhscst ktqssldtdk kfgrtrsglq rrerrygvss vhdmdsvssr tvgsrslrqr
      181 lqdtvglcfp mrtynkqskp lfsnkrkihl selmlekcpf pagsdlaqkw hlikqhtapv
      241 sphstffdtf dpslvstede edrlrerrrl sieegvdppp naqihtfeat aqvnplyklg
      301 pklapgmtei ngdssvipqa ncdseedttt lclqsrrqkq rqvsgdshah vsrqgawkvh
      361 tqidyihclv pdllqitgnp cywgvmdrye aeallegkpe gtfllrdsaq edylfsvsfr
      421 rynrslhari eqwnhnfsfd ahdpcvfhss tvtgllehyk dpsscmffep lltislnrtf
      481 pfslqyicra vicrcttydg idglplpsml qdflkeyhyk qkvrvrwler epvkak
//
LOCUS       XP_061011459             536 aa            linear   MAM 02-DEC-2023
DEFINITION  suppressor of cytokine signaling 5 [Dama dama].
ACCESSION   XP_061011459
VERSION     XP_061011459.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155476.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..536
                     /product="suppressor of cytokine signaling 5"
                     /calculated_mol_wt=61125
     Region          145..193
                     /region_name="SOCS"
                     /note="Suppressor of cytokine signalling; pfam12610"
                     /db_xref="CDD:432667"
     Region          370..470
                     /region_name="SH2"
                     /note="Src homology 2 (SH2) domain; cl15255"
                     /db_xref="CDD:472789"
     Site            order(388,406,427,429)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198173"
     Site            order(428,458)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198173"
     Region          479..534
                     /region_name="SOCS_SOCS5"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     SOCS5-like proteins. Together with CIS1, the CIS/SOCS
                     family of proteins is characterized by the presence of a
                     C-terminal SOCS box and a central SH2 domain. SOCS5
                     inhibits Th2 differentiation by inhibiting...; cd03739"
                     /db_xref="CDD:239708"
     Site            order(480..485,491,498,504,509)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239708"
     CDS             1..536
                     /gene="SOCS5"
                     /coded_by="XM_061155476.1:232..1842"
                     /db_xref="GeneID:133064927"
ORIGIN      
        1 mdkvgkmwnn fkyrcqnlfg hdggsrsenv dmnsnrclsv keknislgds apqqqssplr
       61 envalqlgls psknssrrnq ncateipqiv eisiekdnds cvtpgtrlar rdsysrhapw
      121 ggkkkhscst ktqssldtdk kfgrtrsglq rrerrygvss vhdmdsvssr tvgsrslrqr
      181 lqdtvglcfp mrtynkqskp lfsnkrkihl selmlekcpf pagsdlaqkw hlikqhtapv
      241 sphstffdtf dpslvstede edrlrerrrl sieegvdppp naqihtfeat aqvnplyklg
      301 pklapgmtei ngdssvipqa ncdseedttt lclqsrrqkq rqvsgdshah vsrqgawkvh
      361 tqidyihclv pdllqitgnp cywgvmdrye aeallegkpe gtfllrdsaq edylfsvsfr
      421 rynrslhari eqwnhnfsfd ahdpcvfhss tvtgllehyk dpsscmffep lltislnrtf
      481 pfslqyicra vicrcttydg idglplpsml qdflkeyhyk qkvrvrwler epvkak
//
LOCUS       XP_061011460             536 aa            linear   MAM 02-DEC-2023
DEFINITION  suppressor of cytokine signaling 5 [Dama dama].
ACCESSION   XP_061011460
VERSION     XP_061011460.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155477.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..536
                     /product="suppressor of cytokine signaling 5"
                     /calculated_mol_wt=61125
     Region          145..193
                     /region_name="SOCS"
                     /note="Suppressor of cytokine signalling; pfam12610"
                     /db_xref="CDD:432667"
     Region          370..470
                     /region_name="SH2"
                     /note="Src homology 2 (SH2) domain; cl15255"
                     /db_xref="CDD:472789"
     Site            order(388,406,427,429)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198173"
     Site            order(428,458)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198173"
     Region          479..534
                     /region_name="SOCS_SOCS5"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     SOCS5-like proteins. Together with CIS1, the CIS/SOCS
                     family of proteins is characterized by the presence of a
                     C-terminal SOCS box and a central SH2 domain. SOCS5
                     inhibits Th2 differentiation by inhibiting...; cd03739"
                     /db_xref="CDD:239708"
     Site            order(480..485,491,498,504,509)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239708"
     CDS             1..536
                     /gene="SOCS5"
                     /coded_by="XM_061155477.1:301..1911"
                     /db_xref="GeneID:133064927"
ORIGIN      
        1 mdkvgkmwnn fkyrcqnlfg hdggsrsenv dmnsnrclsv keknislgds apqqqssplr
       61 envalqlgls psknssrrnq ncateipqiv eisiekdnds cvtpgtrlar rdsysrhapw
      121 ggkkkhscst ktqssldtdk kfgrtrsglq rrerrygvss vhdmdsvssr tvgsrslrqr
      181 lqdtvglcfp mrtynkqskp lfsnkrkihl selmlekcpf pagsdlaqkw hlikqhtapv
      241 sphstffdtf dpslvstede edrlrerrrl sieegvdppp naqihtfeat aqvnplyklg
      301 pklapgmtei ngdssvipqa ncdseedttt lclqsrrqkq rqvsgdshah vsrqgawkvh
      361 tqidyihclv pdllqitgnp cywgvmdrye aeallegkpe gtfllrdsaq edylfsvsfr
      421 rynrslhari eqwnhnfsfd ahdpcvfhss tvtgllehyk dpsscmffep lltislnrtf
      481 pfslqyicra vicrcttydg idglplpsml qdflkeyhyk qkvrvrwler epvkak
//
LOCUS       XP_061011461             536 aa            linear   MAM 02-DEC-2023
DEFINITION  suppressor of cytokine signaling 5 [Dama dama].
ACCESSION   XP_061011461
VERSION     XP_061011461.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155478.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..536
                     /product="suppressor of cytokine signaling 5"
                     /calculated_mol_wt=61125
     Region          145..193
                     /region_name="SOCS"
                     /note="Suppressor of cytokine signalling; pfam12610"
                     /db_xref="CDD:432667"
     Region          370..470
                     /region_name="SH2"
                     /note="Src homology 2 (SH2) domain; cl15255"
                     /db_xref="CDD:472789"
     Site            order(388,406,427,429)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198173"
     Site            order(428,458)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198173"
     Region          479..534
                     /region_name="SOCS_SOCS5"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     SOCS5-like proteins. Together with CIS1, the CIS/SOCS
                     family of proteins is characterized by the presence of a
                     C-terminal SOCS box and a central SH2 domain. SOCS5
                     inhibits Th2 differentiation by inhibiting...; cd03739"
                     /db_xref="CDD:239708"
     Site            order(480..485,491,498,504,509)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239708"
     CDS             1..536
                     /gene="SOCS5"
                     /coded_by="XM_061155478.1:333..1943"
                     /db_xref="GeneID:133064927"
ORIGIN      
        1 mdkvgkmwnn fkyrcqnlfg hdggsrsenv dmnsnrclsv keknislgds apqqqssplr
       61 envalqlgls psknssrrnq ncateipqiv eisiekdnds cvtpgtrlar rdsysrhapw
      121 ggkkkhscst ktqssldtdk kfgrtrsglq rrerrygvss vhdmdsvssr tvgsrslrqr
      181 lqdtvglcfp mrtynkqskp lfsnkrkihl selmlekcpf pagsdlaqkw hlikqhtapv
      241 sphstffdtf dpslvstede edrlrerrrl sieegvdppp naqihtfeat aqvnplyklg
      301 pklapgmtei ngdssvipqa ncdseedttt lclqsrrqkq rqvsgdshah vsrqgawkvh
      361 tqidyihclv pdllqitgnp cywgvmdrye aeallegkpe gtfllrdsaq edylfsvsfr
      421 rynrslhari eqwnhnfsfd ahdpcvfhss tvtgllehyk dpsscmffep lltislnrtf
      481 pfslqyicra vicrcttydg idglplpsml qdflkeyhyk qkvrvrwler epvkak
//
LOCUS       XP_061011462             219 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphatidylinositol-glycan biosynthesis class F protein [Dama
            dama].
ACCESSION   XP_061011462
VERSION     XP_061011462.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155479.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..219
                     /product="phosphatidylinositol-glycan biosynthesis class F
                     protein"
                     /calculated_mol_wt=24937
     Region          27..204
                     /region_name="PIG-F"
                     /note="GPI biosynthesis protein family Pig-F; pfam06699"
                     /db_xref="CDD:461990"
     CDS             1..219
                     /gene="PIGF"
                     /coded_by="XM_061155479.1:118..777"
                     /db_xref="GeneID:133064931"
ORIGIN      
        1 mkdtdikkll ythllcifsi ilsifipsff lenfsileth ltwlcicsis vtavnlvlyl
       61 vlkpnvsskr sslsykvtrf lkcciyflts cfffhvifvl ygaplielal etfslavils
      121 tfttvpclcl lgpnfkawlr ifsrngvtsv wenslqitti ssfvgiwlga fpipldwgrp
      181 wqewpisctl gatfgyvagl visplwiywn rkkltyknn
//
LOCUS       XP_061011463             205 aa            linear   MAM 02-DEC-2023
DEFINITION  rho-related GTP-binding protein RhoQ isoform X1 [Dama dama].
ACCESSION   XP_061011463
VERSION     XP_061011463.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155480.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..205
                     /product="rho-related GTP-binding protein RhoQ isoform X1"
                     /calculated_mol_wt=22528
     Region          10..183
                     /region_name="Tc10"
                     /note="Rho GTPase TC10 (Tc10); cd04135"
                     /db_xref="CDD:206707"
     Site            order(11,41..42,45..46,48,50,58,62..63,65..67,73,76)
                     /site_type="other"
                     /note="putative GEF (guanine nucleotide exchange factor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206707"
     Site            16..23
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206707"
     Site            order(19..24,63..64,66,122,124,165..166)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206707"
     Site            40..46
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206707"
     Site            41
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206707"
     Site            order(42,65,73,75)
                     /site_type="active"
                     /note="putative GDI (guanine nucleotide dissociation
                     inhibitor) interaction [active]"
                     /db_xref="CDD:206707"
     Site            order(42..43,67,73)
                     /site_type="other"
                     /note="putative GAP (GTPase-activating protein)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206707"
     Site            order(43..44,73,76)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206707"
     Site            63..66
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206707"
     Site            order(66..67,73..76,81..83)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206707"
     Site            121..124
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206707"
     Site            164..166
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206707"
     CDS             1..205
                     /gene="RHOQ"
                     /coded_by="XM_061155480.1:52..669"
                     /db_xref="GeneID:133064932"
ORIGIN      
        1 mahgpgalml kcvvvgdgav gktcllmsya ndafpeeyvp tvfdhyavsv tvggkqyllg
       61 lydtagqedy drlrplsypm tdvflicfsv vnpasfqnvk eewvpelkey apnvpfllig
      121 tqidlrddpk tlarlndmke kpicveqgqk lakeigaccy vecsaltqkg lktvfdeaii
      181 ailtpkkhtv kkrigsrcin cclit
//
LOCUS       XP_061011464             164 aa            linear   MAM 02-DEC-2023
DEFINITION  rho-related GTP-binding protein RhoQ isoform X2 [Dama dama].
ACCESSION   XP_061011464
VERSION     XP_061011464.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155481.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..164
                     /product="rho-related GTP-binding protein RhoQ isoform X2"
                     /calculated_mol_wt=18160
     Region          10..157
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            16..23
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206707"
     Site            41
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206707"
     Site            44..46
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206707"
     Site            63..66
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206707"
     Site            order(65..66,82..83)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206707"
     Site            121..124
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206707"
     CDS             1..164
                     /gene="RHOQ"
                     /coded_by="XM_061155481.1:61..555"
                     /db_xref="GeneID:133064932"
ORIGIN      
        1 mahgpgalml kcvvvgdgav gktcllmsya ndafpeeyvp tvfdhyavsv tvggkqyllg
       61 lydtagqedy drlrplsypm tdvflicfsv vnpasfqnvk eewvpelkey apnvpfllig
      121 tqidlrddpk tlarlndmke kpicveqgqk lakevraamw nvql
//
LOCUS       XP_061011465             101 aa            linear   MAM 02-DEC-2023
DEFINITION  cysteine-rich PDZ-binding protein [Dama dama].
ACCESSION   XP_061011465
VERSION     XP_061011465.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155482.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..101
                     /product="cysteine-rich PDZ-binding protein"
                     /calculated_mol_wt=11085
     Region          11..99
                     /region_name="Cript"
                     /note="Microtubule-associated protein CRIPT; pfam10235"
                     /db_xref="CDD:431159"
     CDS             1..101
                     /gene="CRIPT"
                     /coded_by="XM_061155482.1:116..421"
                     /db_xref="GeneID:133064934"
ORIGIN      
        1 mvcekcekkl gtvitpdtwk dgarnttesg grklnenkal tskkarfdpy gknkfstcri
       61 ckssvhqpgs hycqgcaykk gicamcgkkv ldtknykqts v
//
LOCUS       XP_061011466             101 aa            linear   MAM 02-DEC-2023
DEFINITION  cysteine-rich PDZ-binding protein [Dama dama].
ACCESSION   XP_061011466
VERSION     XP_061011466.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155483.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..101
                     /product="cysteine-rich PDZ-binding protein"
                     /calculated_mol_wt=11085
     Region          11..99
                     /region_name="Cript"
                     /note="Microtubule-associated protein CRIPT; pfam10235"
                     /db_xref="CDD:431159"
     CDS             1..101
                     /gene="CRIPT"
                     /coded_by="XM_061155483.1:116..421"
                     /db_xref="GeneID:133064934"
ORIGIN      
        1 mvcekcekkl gtvitpdtwk dgarnttesg grklnenkal tskkarfdpy gknkfstcri
       61 ckssvhqpgs hycqgcaykk gicamcgkkv ldtknykqts v
//
LOCUS       XP_061011467             870 aa            linear   MAM 02-DEC-2023
DEFINITION  endothelial PAS domain-containing protein 1 [Dama dama].
ACCESSION   XP_061011467
VERSION     XP_061011467.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155484.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..870
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..870
                     /product="endothelial PAS domain-containing protein 1"
                     /calculated_mol_wt=96050
     Region          9..74
                     /region_name="bHLH-PAS_HIF2a_PASD2"
                     /note="basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS)
                     domain found in hypoxia-inducible factor 2-alpha (HIF2a)
                     and similar proteins; cd19728"
                     /db_xref="CDD:381571"
     Site            order(15..16,18..20,23..24,26..27,52..53)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381571"
     Site            order(29..30,33..34,36..37,53..54,57..58,61,63,65,67,70,
                     73..74)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381571"
     Region          86..147
                     /region_name="PAS"
                     /note="PAS domain; smart00091"
                     /db_xref="CDD:214512"
     Region          254..341
                     /region_name="PAS_3"
                     /note="PAS fold; pfam08447"
                     /db_xref="CDD:430001"
     Site            order(257,261,267,280..283,309,314)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238075"
     Site            order(277,281,289,292..293,321,323)
                     /site_type="other"
                     /note="heme pocket [chemical binding]"
                     /db_xref="CDD:238075"
     Region          516..548
                     /region_name="HIF-1"
                     /note="Hypoxia-inducible factor-1; pfam11413"
                     /db_xref="CDD:463274"
     Region          833..869
                     /region_name="HIF-1a_CTAD"
                     /note="HIF-1 alpha C terminal transactivation domain;
                     pfam08778"
                     /db_xref="CDD:430212"
     CDS             1..870
                     /gene="EPAS1"
                     /coded_by="XM_061155484.1:557..3169"
                     /db_xref="GeneID:133064935"
ORIGIN      
        1 mtadkekkrs sserrkeksr daarcrrske tevfyelahe lplphsvssh ldkasimrla
       61 isflrthkll ssvcsenese adadqqmdnl ylkalegfia vvtqdgdmif lseniskfmg
      121 ltqveltghs ifdfthpcdh eeirenlslk ngsgfgkksk dmsterdffm rmkctvtnrg
      181 rtvnlksatw kvlhctgqvk vynncpphss lcgckeplls cliimcepiq hpshmdipld
      241 sktflsrhsm dmkftycddr itelvgyhpe ellgrsayef yhaldsenmt kshqnlctkg
      301 qvvsgqyrml akhggyvwle tqgtviynpr nlqpqcimcv nyvlseiekn dvvfsmdqte
      361 spfkphlltm nsifdnsgkv avseksnflf tklkeepeel aqlaptagdt iisldfgtpn
      421 feessaygka ilppgqqwtg elkshsshse agslpaftvp qaaalgnstp sgssssscst
      481 psspgdyyts lddnlkieai eklfamdtet kdqcgtqtdf neldletlap yipmdgedfq
      541 lspicpeesl lpetpqstpq hcfstmsnif qplapmashs tflldkyqqq leskktepeq
      601 rrvsfaffdg gskvsllqcc gqtctplssm ggisntqwpp dpplqlgpmk wpgedqhaea
      661 lgaaplgppi atphlamfkk rsakgfgpqg pdvmspamia lsnklklkrq leheeqafqd
      721 msggdppggs tshlmwkrmk slrgggtcsl mpdklpnanv pndefiqnpv rgrsqplrhl
      781 pppqppsaps pgepaksgfp pqcyapqyqd yslpaahkms gmasrllgps fepyllpelt
      841 rydcevnvpv pgtstllqgg dllraldqat
//
LOCUS       XP_061011468             769 aa            linear   MAM 02-DEC-2023
DEFINITION  protein kinase C epsilon type isoform X1 [Dama dama].
ACCESSION   XP_061011468
VERSION     XP_061011468.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155485.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..769
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..769
                     /product="protein kinase C epsilon type isoform X1"
                     /calculated_mol_wt=87056
     Region          3..135
                     /region_name="C2_PKC_epsilon"
                     /note="C2 domain in Protein Kinase C (PKC) epsilon;
                     cd04014"
                     /db_xref="CDD:175981"
     Site            order(39,86,92)
                     /site_type="metal-binding"
                     /note="metal binding pocket [ion binding]"
                     /db_xref="CDD:175981"
     Region          161..224
                     /region_name="C1_nPKC_epsilon-like_rpt1"
                     /note="first protein kinase C conserved region 1 (C1
                     domain) found in novel protein kinase C (nPKC) epsilon,
                     eta, and similar proteins; cd20835"
                     /db_xref="CDD:410385"
     Site            order(175..181,189..193,197)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410385"
     Region          273..327
                     /region_name="C1_nPKC_epsilon-like_rpt2"
                     /note="second protein kinase C conserved region 1 (C1
                     domain) found in novel protein kinase C (nPKC) epsilon,
                     eta, and similar proteins; cd20838"
                     /db_xref="CDD:410388"
     Site            order(280..286,294..298,301)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410388"
     Region          444..764
                     /region_name="STKc_nPKC_epsilon"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Novel Protein Kinase C epsilon; cd05591"
                     /db_xref="CDD:270743"
     Site            order(446..450,454,467,469,502,518..519,521,525,527,564,
                     566,568..569,571,581..582,585,599..604,631,637,640)
                     /site_type="active"
                     /db_xref="CDD:270743"
     Site            order(446..450,454,467,469,502,519..521,525,564,566,
                     568..569,571,581..582)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270743"
     Site            order(450,525,527,564,566,568,585,599..604,631,637,640)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270743"
     Site            581..604
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270743"
     Site            742
                     /site_type="other"
                     /note="turn motif phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:270743"
     Site            757..762
                     /site_type="other"
                     /note="hydrophobic motif (HM)"
                     /db_xref="CDD:270743"
     CDS             1..769
                     /gene="PRKCE"
                     /coded_by="XM_061155485.1:581..2890"
                     /db_xref="GeneID:133064936"
ORIGIN      
        1 mvvfngllki kiceavslkp tawslrhavg prpqtflldp yialnvddsr igqtatkqkt
       61 nspawhdefv tdvcngrkie lavfhdapig yddfvancti qfeellqngs rhfedwidle
      121 pegrvyviid lsgssgeapk dneervfrer mrprkrqgav rrrvhqvngh kfmatylrqp
      181 tycshcrdfi wgvigkqgyq cqvctcvvhk rcheliitkc aglkkqetpd eglidptils
      241 pndnssrpkc evqidccvpw dlevgsqrfs vnmphkfgih nykvptfcdh cgsllwgllr
      301 qglqckvckm nvhrrcetnv apncgvdarg iakvladlgv tpdkitnsgq rrkkliagae
      361 spqpasgssp seedrsksap tspcdqeike lennirkals fdnrgeehra asstdgqlas
      421 lgengeirqg qakrlgldef nfikvlgkgs fgkvmlaelk gkdevyavkv lkkdvilqdd
      481 dvdctmtekr ilalarkhpy ltqlyccfqt kdrlffvmey vnggdlmfqi qrsrkfdepr
      541 srfyaaevts almflhqhgv iyrdlkldni lldaeghckl adfgmckegi lngvttttfc
      601 gtpdyiapei lqeleygpsv dwwalgvlmy emmagqppfe adneddlfes ilhddvlypv
      661 wlskeavsil kafmtknphk rlgcvaaqng edaikqhpff keidwllleq kkikppfkpr
      721 iktkrdvnnf dqdftreepv ltlvdeaivk qinqeefkgf syfgedlmp
//
LOCUS       XP_061011469             737 aa            linear   MAM 02-DEC-2023
DEFINITION  protein kinase C epsilon type isoform X2 [Dama dama].
ACCESSION   XP_061011469
VERSION     XP_061011469.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155486.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..737
                     /product="protein kinase C epsilon type isoform X2"
                     /calculated_mol_wt=83516
     Region          3..135
                     /region_name="C2_PKC_epsilon"
                     /note="C2 domain in Protein Kinase C (PKC) epsilon;
                     cd04014"
                     /db_xref="CDD:175981"
     Site            order(39,86,92)
                     /site_type="metal-binding"
                     /note="metal binding pocket [ion binding]"
                     /db_xref="CDD:175981"
     Region          161..224
                     /region_name="C1_nPKC_epsilon-like_rpt1"
                     /note="first protein kinase C conserved region 1 (C1
                     domain) found in novel protein kinase C (nPKC) epsilon,
                     eta, and similar proteins; cd20835"
                     /db_xref="CDD:410385"
     Site            order(175..181,189..193,197)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410385"
     Region          241..295
                     /region_name="C1_nPKC_epsilon-like_rpt2"
                     /note="second protein kinase C conserved region 1 (C1
                     domain) found in novel protein kinase C (nPKC) epsilon,
                     eta, and similar proteins; cd20838"
                     /db_xref="CDD:410388"
     Site            order(248..254,262..266,269)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410388"
     Region          412..732
                     /region_name="STKc_nPKC_epsilon"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Novel Protein Kinase C epsilon; cd05591"
                     /db_xref="CDD:270743"
     Site            order(414..418,422,435,437,470,486..487,489,493,495,532,
                     534,536..537,539,549..550,553,567..572,599,605,608)
                     /site_type="active"
                     /db_xref="CDD:270743"
     Site            order(414..418,422,435,437,470,487..489,493,532,534,
                     536..537,539,549..550)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270743"
     Site            order(418,493,495,532,534,536,553,567..572,599,605,608)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270743"
     Site            549..572
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270743"
     Site            710
                     /site_type="other"
                     /note="turn motif phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:270743"
     Site            725..730
                     /site_type="other"
                     /note="hydrophobic motif (HM)"
                     /db_xref="CDD:270743"
     CDS             1..737
                     /gene="PRKCE"
                     /coded_by="XM_061155486.1:581..2794"
                     /db_xref="GeneID:133064936"
ORIGIN      
        1 mvvfngllki kiceavslkp tawslrhavg prpqtflldp yialnvddsr igqtatkqkt
       61 nspawhdefv tdvcngrkie lavfhdapig yddfvancti qfeellqngs rhfedwidle
      121 pegrvyviid lsgssgeapk dneervfrer mrprkrqgav rrrvhqvngh kfmatylrqp
      181 tycshcrdfi wgvigkqgyq cqvctcvvhk rcheliitkc aglkkqetpd evgsqrfsvn
      241 mphkfgihny kvptfcdhcg sllwgllrqg lqckvckmnv hrrcetnvap ncgvdargia
      301 kvladlgvtp dkitnsgqrr kkliagaesp qpasgsspse edrsksapts pcdqeikele
      361 nnirkalsfd nrgeehraas stdgqlaslg engeirqgqa krlgldefnf ikvlgkgsfg
      421 kvmlaelkgk devyavkvlk kdvilqdddv dctmtekril alarkhpylt qlyccfqtkd
      481 rlffvmeyvn ggdlmfqiqr srkfdeprsr fyaaevtsal mflhqhgviy rdlkldnill
      541 daeghcklad fgmckegiln gvttttfcgt pdyiapeilq eleygpsvdw walgvlmyem
      601 magqppfead neddlfesil hddvlypvwl skeavsilka fmtknphkrl gcvaaqnged
      661 aikqhpffke idwllleqkk ikppfkprik tkrdvnnfdq dftreepvlt lvdeaivkqi
      721 nqeefkgfsy fgedlmp
//
LOCUS       XP_061011470            1009 aa            linear   MAM 02-DEC-2023
DEFINITION  S1 RNA-binding domain-containing protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061011470
VERSION     XP_061011470.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155487.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1009
                     /product="S1 RNA-binding domain-containing protein 1
                     isoform X1"
                     /calculated_mol_wt=112855
     Region          223..1003
                     /region_name="Tex"
                     /note="Transcriptional accessory protein Tex/SPT6
                     [Transcription]; COG2183"
                     /db_xref="CDD:441786"
     CDS             1..1009
                     /gene="SRBD1"
                     /coded_by="XM_061155487.1:12..3041"
                     /db_xref="GeneID:133064937"
ORIGIN      
        1 mlsstqnhgp sdtpggkmss lprrakakvq tviskdefss fselssased dkedsawepq
       61 kkvprsrkpp vskvskpkrv prvkntlqis dgsedmavke elnnsiaiad vdledknkle
      121 tgqtlktakt krknsaqsps arrtkklktg eeankassle srnnsiemps tstmweggck
      181 eeenkddftc gqsplkkvkt etcpqgqpvr fpantsnied vemnwdivqv lsertdvelw
      241 vcaniirlfn ddntipfiir yrkelinnld adslrevqqt leelravakk ahstiqkikk
      301 egkmsecllk allncktfee lehvsapykt gskgtkaqra kqlglegaar tllenpgeln
      361 llsyirpsvk glsalqdiet gvqhiladmi akdkdtldfi rklcqdryih iqsslakvss
      421 kkvnekdvdk fqlyqnfscn irniqhhqil ainrgenlki ltvkvnipdg vkkefcrwci
      481 qnrwrprgfa rpelmkilyn slddsfkrli ypllcrefra kltsdaekes vmmfgrnlrq
      541 llltspvpgr tlmgvdpgyk hgcklavisp tsqilhtdvv ylhcgqgfre aekikrllln
      601 fncstvvign gtacreteay fadlimknyf apldvvyciv neagasiysv speankempg
      661 ldpnlrsavs iarrvqdpla elvkiepkhi gvgmyqhdvs qtllkatlds vveecvsfvg
      721 vdinicsevl lrhiaglnan rakniiewre kngpfinreq lkkvkglgpk sfqqcagfir
      781 vnqdyirtfc ssqqtesage tqgvavtasa gvevtnekqg kkrsktavnv vlkpnpldqt
      841 cihpesydia mrflsfvggt lyeigkpemq qkidsfleke giektaerlq ttvhtlqviv
      901 dglsqpesfd frtdfdkpdf krsivcledl qvgtvltgkv enatlfgifv digvgrsgli
      961 pirnvteakl sktkkrrslg lgpgervevr vlnidiprsr itldlirvl
//
LOCUS       XP_061011471            1008 aa            linear   MAM 02-DEC-2023
DEFINITION  S1 RNA-binding domain-containing protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061011471
VERSION     XP_061011471.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155488.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1008
                     /product="S1 RNA-binding domain-containing protein 1
                     isoform X2"
                     /calculated_mol_wt=112768
     Region          223..1002
                     /region_name="Tex"
                     /note="Transcriptional accessory protein Tex/SPT6
                     [Transcription]; COG2183"
                     /db_xref="CDD:441786"
     CDS             1..1008
                     /gene="SRBD1"
                     /coded_by="XM_061155488.1:12..3038"
                     /db_xref="GeneID:133064937"
ORIGIN      
        1 mlsstqnhgp sdtpggkmss lprrakakvq tviskdefss fselssased dkedsawepq
       61 kkvprsrkpp vskvskpkrv prvkntlqis dgsedmavke elnnsiaiad vdledknkle
      121 tgqtlktakt krknsaqsps arrtkklktg eeankassle srnnsiemps tstmweggck
      181 eeenkddftc gqsplkkvkt etcpqgqpvr fpantsnied vemnwdivqv lsertdvelw
      241 vcaniirlfn ddntipfiir yrkelinnld adslrevqqt leelravakk ahstiqkikk
      301 egkmsecllk allncktfee lehvsapykt gskgtkaqra kqlglegaar tllenpgeln
      361 llsyirpsvk glsalqdiet gvqhiladmi akdkdtldfi rklcqdryih iqsslakvss
      421 kkvnekdvdk fqlyqnfscn irniqhhqil ainrgenlki ltvkvnipdg vkkefcrwci
      481 qnrwrprgfa rpelmkilyn slddsfkrli ypllcrefra kltsdaekes vmmfgrnlrq
      541 llltspvpgr tlmgvdpgyk hgcklavisp tsqilhtdvv ylhcgqgfre aekikrllln
      601 fncstvvign gtacreteay fadlimknyf apldvvyciv neagasiysv speankempg
      661 ldpnlrsavs iarrvqdpla elvkiepkhi gvgmyqhdvs qtllkatlds vveecvsfvg
      721 vdinicsevl lrhiaglnan rakniiewre kngpfinreq lkkvkglgpk sfqqcagfir
      781 vnqdyirtfc sqqtesaget qgvavtasag vevtnekqgk krsktavnvv lkpnpldqtc
      841 ihpesydiam rflsfvggtl yeigkpemqq kidsflekeg iektaerlqt tvhtlqvivd
      901 glsqpesfdf rtdfdkpdfk rsivcledlq vgtvltgkve natlfgifvd igvgrsglip
      961 irnvteakls ktkkrrslgl gpgervevrv lnidiprsri tldlirvl
//
LOCUS       XP_061011472             992 aa            linear   MAM 02-DEC-2023
DEFINITION  S1 RNA-binding domain-containing protein 1 isoform X3 [Dama dama].
ACCESSION   XP_061011472
VERSION     XP_061011472.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155489.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..992
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..992
                     /product="S1 RNA-binding domain-containing protein 1
                     isoform X3"
                     /calculated_mol_wt=111159
     Region          206..986
                     /region_name="Tex"
                     /note="Transcriptional accessory protein Tex/SPT6
                     [Transcription]; COG2183"
                     /db_xref="CDD:441786"
     CDS             1..992
                     /gene="SRBD1"
                     /coded_by="XM_061155489.1:22..3000"
                     /db_xref="GeneID:133064937"
ORIGIN      
        1 msslprraka kvqtviskde fssfselssa seddkedsaw epqkkvprsr kppvskvskp
       61 krvprvkntl qisdgsedma vkeelnnsia iadvdledkn kletgqtlkt aktkrknsaq
      121 spsarrtkkl ktgeeankas slesrnnsie mpststmweg gckeeenkdd ftcgqsplkk
      181 vktetcpqgq pvrfpantsn iedvemnwdi vqvlsertdv elwvcaniir lfnddntipf
      241 iiryrkelin nldadslrev qqtleelrav akkahstiqk ikkegkmsec llkallnckt
      301 feelehvsap yktgskgtka qrakqlgleg aartllenpg elnllsyirp svkglsalqd
      361 ietgvqhila dmiakdkdtl dfirklcqdr yihiqsslak vsskkvnekd vdkfqlyqnf
      421 scnirniqhh qilainrgen lkiltvkvni pdgvkkefcr wciqnrwrpr gfarpelmki
      481 lynslddsfk rliypllcre frakltsdae kesvmmfgrn lrqllltspv pgrtlmgvdp
      541 gykhgcklav isptsqilht dvvylhcgqg freaekikrl llnfncstvv igngtacret
      601 eayfadlimk nyfapldvvy civneagasi ysvspeanke mpgldpnlrs avsiarrvqd
      661 plaelvkiep khigvgmyqh dvsqtllkat ldsvveecvs fvgvdinics evllrhiagl
      721 nanrakniie wrekngpfin reqlkkvkgl gpksfqqcag firvnqdyir tfcssqqtes
      781 agetqgvavt asagvevtne kqgkkrskta vnvvlkpnpl dqtcihpesy diamrflsfv
      841 ggtlyeigkp emqqkidsfl ekegiektae rlqttvhtlq vivdglsqpe sfdfrtdfdk
      901 pdfkrsivcl edlqvgtvlt gkvenatlfg ifvdigvgrs glipirnvte aklsktkkrr
      961 slglgpgerv evrvlnidip rsritldlir vl
//
LOCUS       XP_061011473             323 aa            linear   MAM 02-DEC-2023
DEFINITION  calmodulin-lysine N-methyltransferase isoform X1 [Dama dama].
ACCESSION   XP_061011473
VERSION     XP_061011473.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155490.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..323
                     /product="calmodulin-lysine N-methyltransferase isoform
                     X1"
                     /calculated_mol_wt=35795
     Region          113..278
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Site            order(153..159,178..179,203..205,231)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
     CDS             1..323
                     /gene="CAMKMT"
                     /coded_by="XM_061155490.1:102..1073"
                     /db_xref="GeneID:133064940"
ORIGIN      
        1 mesqvsdaaa gqaeqtageg qtdsgaargp aasaplgaar wkllrqvlkq khlddclrhi
       61 svrrfesfnl fsvtevkkle teeeagawvq ytsifypeys vflrhnsgsl nvedvltsfd
      121 ntgnvciwpa eevlayyclk hsgifrdlav celgggmtcl aglmvaisad vkevlltdgn
      181 ekairnvrdi iarnqkagvf ktgnlsscvl rwdnetdvsq leghfdivmc adclfldqyr
      241 aslvdaikrl lqpggkamvf aprrgntlnq fcilaekagf siqrhenyde hisnfhsklk
      301 kenqdvyeen lhfplllilt kdg
//
LOCUS       XP_061011474             298 aa            linear   MAM 02-DEC-2023
DEFINITION  calmodulin-lysine N-methyltransferase isoform X2 [Dama dama].
ACCESSION   XP_061011474
VERSION     XP_061011474.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155491.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..298
                     /product="calmodulin-lysine N-methyltransferase isoform
                     X2"
                     /calculated_mol_wt=32917
     Region          113..253
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     CDS             1..298
                     /gene="CAMKMT"
                     /coded_by="XM_061155491.1:102..998"
                     /db_xref="GeneID:133064940"
ORIGIN      
        1 mesqvsdaaa gqaeqtageg qtdsgaargp aasaplgaar wkllrqvlkq khlddclrhi
       61 svrrfesfnl fsvtevkkle teeeagawvq ytsifypeys vflrhnsgsl nvedvltsfd
      121 ntgnvciwpa eevlayyclk hsgifrdlav celgggmtcl aglmvaisad vkevlltdgn
      181 ekairnvrdi iarnqkagvf ktgnlssclf ldqyraslvd aikrllqpgg kamvfaprrg
      241 ntlnqfcila ekagfsiqrh enydehisnf hsklkkenqd vyeenlhfpl lliltkdg
//
LOCUS       XP_061011475             727 aa            linear   MAM 02-DEC-2023
DEFINITION  prolyl endopeptidase-like isoform X1 [Dama dama].
ACCESSION   XP_061011475
VERSION     XP_061011475.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155492.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..727
                     /product="prolyl endopeptidase-like isoform X1"
                     /calculated_mol_wt=83764
     Region          116..649
                     /region_name="PtrB"
                     /note="Protease II [Amino acid transport and metabolism];
                     COG1770"
                     /db_xref="CDD:441376"
     CDS             1..727
                     /gene="PREPL"
                     /coded_by="XM_061155492.1:485..2668"
                     /db_xref="GeneID:133064941"
ORIGIN      
        1 mqqksqlflq alkysiphlg kcmqkqhlnh cnfadhyynr iklkkyqltk clqnkprise
       61 larnipsrnf scknflsskq enekplsenm dafekvrakl etqpqeeyei inaeikhggf
      121 vyyqegcclv rskdeeadnd nyevlfnlee lkleqpfidc irvapdekyv aakirtedse
      181 sstcivvkls dqpvmeasfp nvssfewvkd eededvlfyt fqrnlrchdv yratfgdnkr
      241 nerfytekdp sffvflyltk dsrfltmnim skttsevwli dglspwdppv liqkrihgvl
      301 yyvehrddel yiltnvgept efklmrtaad tpaimnwdlf ftmkrntkvv dldmfkdhcv
      361 lflkhsnlly vnvigladds vrslklppwa cgfiidtnsd pkncpfqlcs pirppkyyty
      421 kfaegklfee tghedpitkt srvlrmeaks kdgklvpmtv fhktdsedlq kkpllvqvyg
      481 aygmdlkmnf rperrvlvdd gwilaychvr gggelglqwh adgrltkkln gladleacik
      541 tlhdqgfsqp sltaltafsa ggvlvgalcn sspellravt leapfldvln tmmdttlplt
      601 leeleewgnp ssdekhknyi krycpyqnik pqhypsihit ayendervpl kgivnytekl
      661 keaiaehakd tgegyqvpsi ildiqpggnh viedshkkit aqikflyeel gldstsvfdn
      721 lkkylkf
//
LOCUS       XP_061011476             726 aa            linear   MAM 02-DEC-2023
DEFINITION  prolyl endopeptidase-like isoform X2 [Dama dama].
ACCESSION   XP_061011476
VERSION     XP_061011476.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155493.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..726
                     /product="prolyl endopeptidase-like isoform X2"
                     /calculated_mol_wt=83693
     Region          116..648
                     /region_name="PtrB"
                     /note="Protease II [Amino acid transport and metabolism];
                     COG1770"
                     /db_xref="CDD:441376"
     CDS             1..726
                     /gene="PREPL"
                     /coded_by="XM_061155493.1:485..2665"
                     /db_xref="GeneID:133064941"
ORIGIN      
        1 mqqksqlflq alkysiphlg kcmqkqhlnh cnfadhyynr iklkkyqltk clqnkprise
       61 larnipsrnf scknflsskq enekplsenm dafekvrakl etqpqeeyei inaeikhggf
      121 vyyqegcclv rskdeedndn yevlfnleel kleqpfidci rvapdekyva akirtedses
      181 stcivvklsd qpvmeasfpn vssfewvkde ededvlfytf qrnlrchdvy ratfgdnkrn
      241 erfytekdps ffvflyltkd srfltmnims kttsevwlid glspwdppvl iqkrihgvly
      301 yvehrddely iltnvgepte fklmrtaadt paimnwdlff tmkrntkvvd ldmfkdhcvl
      361 flkhsnllyv nvigladdsv rslklppwac gfiidtnsdp kncpfqlcsp irppkyytyk
      421 faegklfeet ghedpitkts rvlrmeaksk dgklvpmtvf hktdsedlqk kpllvqvyga
      481 ygmdlkmnfr perrvlvddg wilaychvrg ggelglqwha dgrltkklng ladleacikt
      541 lhdqgfsqps ltaltafsag gvlvgalcns spellravtl eapfldvlnt mmdttlpltl
      601 eeleewgnps sdekhknyik rycpyqnikp qhypsihita yendervplk givnyteklk
      661 eaiaehakdt gegyqvpsii ldiqpggnhv iedshkkita qikflyeelg ldstsvfdnl
      721 kkylkf
//
LOCUS       XP_061011477             638 aa            linear   MAM 02-DEC-2023
DEFINITION  prolyl endopeptidase-like isoform X3 [Dama dama].
ACCESSION   XP_061011477
VERSION     XP_061011477.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155494.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..638
                     /product="prolyl endopeptidase-like isoform X3"
                     /calculated_mol_wt=73171
     Region          27..560
                     /region_name="PtrB"
                     /note="Protease II [Amino acid transport and metabolism];
                     COG1770"
                     /db_xref="CDD:441376"
     CDS             1..638
                     /gene="PREPL"
                     /coded_by="XM_061155494.1:381..2297"
                     /db_xref="GeneID:133064941"
ORIGIN      
        1 mdafekvrak letqpqeeye iinaeikhgg fvyyqegccl vrskdeeadn dnyevlfnle
       61 elkleqpfid cirvapdeky vaakirteds esstcivvkl sdqpvmeasf pnvssfewvk
      121 deededvlfy tfqrnlrchd vyratfgdnk rnerfytekd psffvflylt kdsrfltmni
      181 mskttsevwl idglspwdpp vliqkrihgv lyyvehrdde lyiltnvgep tefklmrtaa
      241 dtpaimnwdl fftmkrntkv vdldmfkdhc vlflkhsnll yvnvigladd svrslklppw
      301 acgfiidtns dpkncpfqlc spirppkyyt ykfaegklfe etghedpitk tsrvlrmeak
      361 skdgklvpmt vfhktdsedl qkkpllvqvy gaygmdlkmn frperrvlvd dgwilaychv
      421 rgggelglqw hadgrltkkl ngladleaci ktlhdqgfsq psltaltafs aggvlvgalc
      481 nsspellrav tleapfldvl ntmmdttlpl tleeleewgn pssdekhkny ikrycpyqni
      541 kpqhypsihi tayendervp lkgivnytek lkeaiaehak dtgegyqvps iildiqpggn
      601 hviedshkki taqikflyee lgldstsvfd nlkkylkf
//
LOCUS       XP_061011478             638 aa            linear   MAM 02-DEC-2023
DEFINITION  prolyl endopeptidase-like isoform X3 [Dama dama].
ACCESSION   XP_061011478
VERSION     XP_061011478.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155495.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..638
                     /product="prolyl endopeptidase-like isoform X3"
                     /calculated_mol_wt=73171
     Region          27..560
                     /region_name="PtrB"
                     /note="Protease II [Amino acid transport and metabolism];
                     COG1770"
                     /db_xref="CDD:441376"
     CDS             1..638
                     /gene="PREPL"
                     /coded_by="XM_061155495.1:211..2127"
                     /db_xref="GeneID:133064941"
ORIGIN      
        1 mdafekvrak letqpqeeye iinaeikhgg fvyyqegccl vrskdeeadn dnyevlfnle
       61 elkleqpfid cirvapdeky vaakirteds esstcivvkl sdqpvmeasf pnvssfewvk
      121 deededvlfy tfqrnlrchd vyratfgdnk rnerfytekd psffvflylt kdsrfltmni
      181 mskttsevwl idglspwdpp vliqkrihgv lyyvehrdde lyiltnvgep tefklmrtaa
      241 dtpaimnwdl fftmkrntkv vdldmfkdhc vlflkhsnll yvnvigladd svrslklppw
      301 acgfiidtns dpkncpfqlc spirppkyyt ykfaegklfe etghedpitk tsrvlrmeak
      361 skdgklvpmt vfhktdsedl qkkpllvqvy gaygmdlkmn frperrvlvd dgwilaychv
      421 rgggelglqw hadgrltkkl ngladleaci ktlhdqgfsq psltaltafs aggvlvgalc
      481 nsspellrav tleapfldvl ntmmdttlpl tleeleewgn pssdekhkny ikrycpyqni
      541 kpqhypsihi tayendervp lkgivnytek lkeaiaehak dtgegyqvps iildiqpggn
      601 hviedshkki taqikflyee lgldstsvfd nlkkylkf
//
LOCUS       XP_061011479             638 aa            linear   MAM 02-DEC-2023
DEFINITION  prolyl endopeptidase-like isoform X3 [Dama dama].
ACCESSION   XP_061011479
VERSION     XP_061011479.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155496.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..638
                     /product="prolyl endopeptidase-like isoform X3"
                     /calculated_mol_wt=73171
     Region          27..560
                     /region_name="PtrB"
                     /note="Protease II [Amino acid transport and metabolism];
                     COG1770"
                     /db_xref="CDD:441376"
     CDS             1..638
                     /gene="PREPL"
                     /coded_by="XM_061155496.1:353..2269"
                     /db_xref="GeneID:133064941"
ORIGIN      
        1 mdafekvrak letqpqeeye iinaeikhgg fvyyqegccl vrskdeeadn dnyevlfnle
       61 elkleqpfid cirvapdeky vaakirteds esstcivvkl sdqpvmeasf pnvssfewvk
      121 deededvlfy tfqrnlrchd vyratfgdnk rnerfytekd psffvflylt kdsrfltmni
      181 mskttsevwl idglspwdpp vliqkrihgv lyyvehrdde lyiltnvgep tefklmrtaa
      241 dtpaimnwdl fftmkrntkv vdldmfkdhc vlflkhsnll yvnvigladd svrslklppw
      301 acgfiidtns dpkncpfqlc spirppkyyt ykfaegklfe etghedpitk tsrvlrmeak
      361 skdgklvpmt vfhktdsedl qkkpllvqvy gaygmdlkmn frperrvlvd dgwilaychv
      421 rgggelglqw hadgrltkkl ngladleaci ktlhdqgfsq psltaltafs aggvlvgalc
      481 nsspellrav tleapfldvl ntmmdttlpl tleeleewgn pssdekhkny ikrycpyqni
      541 kpqhypsihi tayendervp lkgivnytek lkeaiaehak dtgegyqvps iildiqpggn
      601 hviedshkki taqikflyee lgldstsvfd nlkkylkf
//
LOCUS       XP_061011480             685 aa            linear   MAM 02-DEC-2023
DEFINITION  amino acid transporter heavy chain SLC3A1 [Dama dama].
ACCESSION   XP_061011480
VERSION     XP_061011480.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155497.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..685
                     /product="amino acid transporter heavy chain SLC3A1"
                     /calculated_mol_wt=78748
     Region          116..569
                     /region_name="AmyAc_SLC3A1"
                     /note="Alpha amylase catalytic domain found in Solute
                     Carrier family 3 member 1 proteins; cd11359"
                     /db_xref="CDD:200494"
     Site            order(172,175,212,215,259,278,282,314,384,448..449)
                     /site_type="active"
                     /db_xref="CDD:200494"
     Site            order(314,384,449)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:200494"
     CDS             1..685
                     /gene="SLC3A1"
                     /coded_by="XM_061155497.1:144..2201"
                     /db_xref="GeneID:133064943"
ORIGIN      
        1 maedkskrgs tglyakegqt nngfvqnedi letdldpssp aagpqhntvd ilgpgepdvk
       61 dvrpyagmpk evlfqfssqa ryriprevlf wltvasvlvl iaatiaiiai spkcldwwqa
      121 gpmyqiyprs fkdsnkdgng dlkgiqdkld yittlniktv witsfykssl kdfrhgvedf
      181 reidpifgtm kdfenlvaai hdkglkliid fipnhtsdkh awfqwsrnrt gkytdyyiwh
      241 dcnyengiti ppnnwlsvyg nsswhfdevr kqcyfhqftk eqpdlnfrnp dvqeeikeii
      301 qfwlskgvdg fsfnalqfll eakhlrdevq vnktqipdmv thysqlhhdf tttqvgmhdi
      361 vrsfrqtmnq ysrepgryrf mgteahgesi tktmvyyglp fiqeadfpfn nylskldkps
      421 gnsvfevits wmenmpegkw pnwmtggpdn vrltsrlgek yvnimnmlvf tlpgtpityy
      481 geeigmrnil tanlnetydv gtlfskspmq wdnssnagfs egshtwlpts sdyhtvnvdv
      541 qktqprsalk lyqelsllha nelllsrgwf cylrsdnhsi mytreldgin rvflmvlnfg
      601 essllnlkem isniptrvri rlstnsaysg revdthavtl asgegliley ntrnllhrqt
      661 afkdrcfvsn racysrvlni lyslc
//
LOCUS       XP_061011481             479 aa            linear   MAM 02-DEC-2023
DEFINITION  protein phosphatase 1B isoform X1 [Dama dama].
ACCESSION   XP_061011481
VERSION     XP_061011481.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155498.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..479
                     /product="protein phosphatase 1B isoform X1"
                     /calculated_mol_wt=52750
     Region          23..295
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cd00143"
                     /db_xref="CDD:238083"
     Site            order(33,37..38,60..62,243,286)
                     /site_type="active"
                     /db_xref="CDD:238083"
     Region          289..368
                     /region_name="PP2C_C"
                     /note="Protein serine/threonine phosphatase 2C, C-terminal
                     domain; pfam07830"
                     /db_xref="CDD:429684"
     CDS             1..479
                     /gene="PPM1B"
                     /coded_by="XM_061155498.1:441..1880"
                     /db_xref="GeneID:133064944"
ORIGIN      
        1 mgafldkpkt ekhnahgagn glryglssmq gwrvemedah tavvgiphgl edwsffavyd
       61 ghagsrvany csthllehit nnedfraagk sgsalepsve nvkngirtgf lkideymrnf
      121 sdlrngmdrs gstavgvmis pkhiyfincg dsravlyrsg qvcfstqdhk pcnprekeri
      181 qnaggsvmiq rvngslavsr algdydykcv dgkgpteqlv spepevyeil raeedefiil
      241 acdgiwdvms neelcefvks rlevsddlen vcnwvvdtcl hkgsrdnmsi vlvcfsnapk
      301 vsdeamrkds eldkylesrv eeimeksgee gmpdlahvmr ilsaenipnl ppggglagkr
      361 hvieavysrl nphresdgas deaeesgsqg klvealrqmr inhrgnyrql leemltsyrl
      421 akvegeenpa eqaatatssn sdagntvtmq eshtesksdl aeldsrteda gtkmsgekl
//
LOCUS       XP_061011482             479 aa            linear   MAM 02-DEC-2023
DEFINITION  protein phosphatase 1B isoform X1 [Dama dama].
ACCESSION   XP_061011482
VERSION     XP_061011482.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155499.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..479
                     /product="protein phosphatase 1B isoform X1"
                     /calculated_mol_wt=52750
     Region          23..295
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cd00143"
                     /db_xref="CDD:238083"
     Site            order(33,37..38,60..62,243,286)
                     /site_type="active"
                     /db_xref="CDD:238083"
     Region          289..368
                     /region_name="PP2C_C"
                     /note="Protein serine/threonine phosphatase 2C, C-terminal
                     domain; pfam07830"
                     /db_xref="CDD:429684"
     CDS             1..479
                     /gene="PPM1B"
                     /coded_by="XM_061155499.1:299..1738"
                     /db_xref="GeneID:133064944"
ORIGIN      
        1 mgafldkpkt ekhnahgagn glryglssmq gwrvemedah tavvgiphgl edwsffavyd
       61 ghagsrvany csthllehit nnedfraagk sgsalepsve nvkngirtgf lkideymrnf
      121 sdlrngmdrs gstavgvmis pkhiyfincg dsravlyrsg qvcfstqdhk pcnprekeri
      181 qnaggsvmiq rvngslavsr algdydykcv dgkgpteqlv spepevyeil raeedefiil
      241 acdgiwdvms neelcefvks rlevsddlen vcnwvvdtcl hkgsrdnmsi vlvcfsnapk
      301 vsdeamrkds eldkylesrv eeimeksgee gmpdlahvmr ilsaenipnl ppggglagkr
      361 hvieavysrl nphresdgas deaeesgsqg klvealrqmr inhrgnyrql leemltsyrl
      421 akvegeenpa eqaatatssn sdagntvtmq eshtesksdl aeldsrteda gtkmsgekl
//
LOCUS       XP_061011483             427 aa            linear   MAM 02-DEC-2023
DEFINITION  protein phosphatase 1B isoform X2 [Dama dama].
ACCESSION   XP_061011483
VERSION     XP_061011483.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155500.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..427
                     /product="protein phosphatase 1B isoform X2"
                     /calculated_mol_wt=47162
     Region          23..295
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cd00143"
                     /db_xref="CDD:238083"
     Site            order(33,37..38,60..62,243,286)
                     /site_type="active"
                     /db_xref="CDD:238083"
     Region          289..368
                     /region_name="PP2C_C"
                     /note="Protein serine/threonine phosphatase 2C, C-terminal
                     domain; pfam07830"
                     /db_xref="CDD:429684"
     CDS             1..427
                     /gene="PPM1B"
                     /coded_by="XM_061155500.1:441..1724"
                     /db_xref="GeneID:133064944"
ORIGIN      
        1 mgafldkpkt ekhnahgagn glryglssmq gwrvemedah tavvgiphgl edwsffavyd
       61 ghagsrvany csthllehit nnedfraagk sgsalepsve nvkngirtgf lkideymrnf
      121 sdlrngmdrs gstavgvmis pkhiyfincg dsravlyrsg qvcfstqdhk pcnprekeri
      181 qnaggsvmiq rvngslavsr algdydykcv dgkgpteqlv spepevyeil raeedefiil
      241 acdgiwdvms neelcefvks rlevsddlen vcnwvvdtcl hkgsrdnmsi vlvcfsnapk
      301 vsdeamrkds eldkylesrv eeimeksgee gmpdlahvmr ilsaenipnl ppggglagkr
      361 hvieavysrl nphresdgma vlststckpa essgdekgsg wqtlqalkst rtkrffvnlk
      421 enepnim
//
LOCUS       XP_061011484             392 aa            linear   MAM 02-DEC-2023
DEFINITION  protein phosphatase 1B isoform X3 [Dama dama].
ACCESSION   XP_061011484
VERSION     XP_061011484.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155501.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..392
                     /product="protein phosphatase 1B isoform X3"
                     /calculated_mol_wt=43408
     Region          23..295
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cd00143"
                     /db_xref="CDD:238083"
     Site            order(33,37..38,60..62,243,286)
                     /site_type="active"
                     /db_xref="CDD:238083"
     Region          289..368
                     /region_name="PP2C_C"
                     /note="Protein serine/threonine phosphatase 2C, C-terminal
                     domain; pfam07830"
                     /db_xref="CDD:429684"
     CDS             1..392
                     /gene="PPM1B"
                     /coded_by="XM_061155501.1:441..1619"
                     /db_xref="GeneID:133064944"
ORIGIN      
        1 mgafldkpkt ekhnahgagn glryglssmq gwrvemedah tavvgiphgl edwsffavyd
       61 ghagsrvany csthllehit nnedfraagk sgsalepsve nvkngirtgf lkideymrnf
      121 sdlrngmdrs gstavgvmis pkhiyfincg dsravlyrsg qvcfstqdhk pcnprekeri
      181 qnaggsvmiq rvngslavsr algdydykcv dgkgpteqlv spepevyeil raeedefiil
      241 acdgiwdvms neelcefvks rlevsddlen vcnwvvdtcl hkgsrdnmsi vlvcfsnapk
      301 vsdeamrkds eldkylesrv eeimeksgee gmpdlahvmr ilsaenipnl ppggglagkr
      361 hvieavysrl nphresdgfe psvvyldslf tf
//
LOCUS       XP_061011485             387 aa            linear   MAM 02-DEC-2023
DEFINITION  protein phosphatase 1B isoform X4 [Dama dama].
ACCESSION   XP_061011485
VERSION     XP_061011485.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155502.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..387
                     /product="protein phosphatase 1B isoform X4"
                     /calculated_mol_wt=42703
     Region          23..295
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cd00143"
                     /db_xref="CDD:238083"
     Site            order(33,37..38,60..62,243,286)
                     /site_type="active"
                     /db_xref="CDD:238083"
     Region          289..368
                     /region_name="PP2C_C"
                     /note="Protein serine/threonine phosphatase 2C, C-terminal
                     domain; pfam07830"
                     /db_xref="CDD:429684"
     CDS             1..387
                     /gene="PPM1B"
                     /coded_by="XM_061155502.1:441..1604"
                     /db_xref="GeneID:133064944"
ORIGIN      
        1 mgafldkpkt ekhnahgagn glryglssmq gwrvemedah tavvgiphgl edwsffavyd
       61 ghagsrvany csthllehit nnedfraagk sgsalepsve nvkngirtgf lkideymrnf
      121 sdlrngmdrs gstavgvmis pkhiyfincg dsravlyrsg qvcfstqdhk pcnprekeri
      181 qnaggsvmiq rvngslavsr algdydykcv dgkgpteqlv spepevyeil raeedefiil
      241 acdgiwdvms neelcefvks rlevsddlen vcnwvvdtcl hkgsrdnmsi vlvcfsnapk
      301 vsdeamrkds eldkylesrv eeimeksgee gmpdlahvmr ilsaenipnl ppggglagkr
      361 hvieavysrl nphresdgga gdledpw
//
LOCUS       XP_061011486            1391 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich PPR motif-containing protein, mitochondrial [Dama
            dama].
ACCESSION   XP_061011486
VERSION     XP_061011486.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155503.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1391
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1391
                     /product="leucine-rich PPR motif-containing protein,
                     mitochondrial"
                     /calculated_mol_wt=157677
     Region          <145..>285
                     /region_name="PLN03218"
                     /note="maturation of RBCL 1; Provisional"
                     /db_xref="CDD:215636"
     Region          165..192
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          200..227
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          233..262
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          268..297
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          712..738
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          744..775
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          784..808
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          <1114..1308
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     CDS             1..1391
                     /gene="LRPPRC"
                     /coded_by="XM_061155503.1:45..4220"
                     /db_xref="GeneID:133064945"
ORIGIN      
        1 maallrparw llraaaapyl plslrlfagg pgrphaalcl raagarpvag gllsqarlhs
       61 iaaekknylq eeptsshrrn anqfdwalmr ldnsvrrtgr ipktllqkvf dntchsgspg
      121 gnqallllrs cgsllpelkl sertefahki wdelqklgtv ydvshynall kvylqnehkf
      181 sptdflakme kaniqpnrvt yqrliaaycn mgdiegasti lgfmktkdlp vteavfsalv
      241 tgharsgdme naeniltvmk eagiepgpdt ylallnayae kgdidhvkqt lekveksdly
      301 lmdrdllqii lsfskagypq yvpeilekit yerryipdtm nlilllvtek ledtalqill
      361 acpisregsl ndfgsfflrh cvtmdtpaek lkdyckklke aqlhtsplqf tlqcalvaqk
      421 ldlakvlmka lkeegfpirt hyfwpllvgh qkeknvqgiv evlkgmheig vtpdqetyin
      481 yvfpcfdsik svravlqeng cphddnvfsq aelrseavng nldyilsfle sntlpfsfas
      541 lrgslilgfr rsmninlwsk itellykdgr ycqeppgpte avgyflynli dsmsdsevqa
      601 keerlrqyfh qlkemnvkip eniyrgirnl ldsyhvpeli kdvnmlvere ktdsrkpsss
      661 dleskleklk aenqpigdil kqlilmlcse enmekalelk akyesdmvvg gyaalinlcc
      721 rhdnaedaln lkrefdrlds savldtgkyv rlvkvlgkhg klqdainilk emkekdvlik
      781 datvlsffhi lngaalrget etvkqlheai vtlglakpst tlssplvtly lekddlpaal
      841 estidcykky kilprihdvl ckliekgete liqkamdfvs qeqgemtmly dlffaflqtg
      901 nykeakkiie tpgirarptr lqwfcdrcia nnqvetlekl veltqklfec drdqlyysll
      961 klykvngdwq radavwnkmq eeniiprekt lrllaeilrn nnqevpfdvp elwyeeekds
     1021 ptslpspvea nlqkellnac rrrrnkdafn ifltakkqni vfdneayarl inlllmkdns
     1081 mqamqvkdfa ethikgftln daanslliit qvrrdylkda lttlktaldl dqipsrlavt
     1141 rliqacalkg dtesihdiqk lvngledsig lsrmvfinni alaqiknnni diaiesienm
     1201 ltsenqtvdp qyfglaylfr kviegqlepa lekisimaer lanqfavykp vtdlflqlvd
     1261 sgkvddaral lqrcgaiaeq ipiflvfcir nsqrsgkapa mksllelipe lidkeeaytc
     1321 lmksyvldnd vasakalyes ltaknvkfnd lflkryavll knagesvpfa eppesfefya
     1381 kqlkesketh l
//
LOCUS       XP_061011487             670 aa            linear   MAM 02-DEC-2023
DEFINITION  ATP-binding cassette sub-family G member 8 isoform X1 [Dama dama].
ACCESSION   XP_061011487
VERSION     XP_061011487.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155504.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..670
                     /product="ATP-binding cassette sub-family G member 8
                     isoform X1"
                     /calculated_mol_wt=74652
     Region          61..294
                     /region_name="ABCG_White"
                     /note="White pigment protein homolog of ABCG transporter
                     subfamily; cd03234"
                     /db_xref="CDD:213201"
     Region          87..660
                     /region_name="3a01204"
                     /note="The Eye Pigment Precursor Transporter (EPP) Family
                     protein; TIGR00955"
                     /db_xref="CDD:273361"
     Site            104..111
                     /site_type="other"
                     /note="Walker A/P-loop"
                     /db_xref="CDD:213201"
     Site            order(107..108,110..112,152,236..237,269)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:213201"
     Site            149..152
                     /site_type="other"
                     /note="Q-loop/lid"
                     /db_xref="CDD:213201"
     Site            212..221
                     /site_type="other"
                     /note="ABC transporter signature motif"
                     /db_xref="CDD:213201"
     Site            232..237
                     /site_type="other"
                     /note="Walker B"
                     /db_xref="CDD:213201"
     Site            240..243
                     /site_type="other"
                     /note="D-loop"
                     /db_xref="CDD:213201"
     Site            265..271
                     /site_type="other"
                     /note="H-loop/switch region"
                     /db_xref="CDD:213201"
     CDS             1..670
                     /gene="ABCG8"
                     /coded_by="XM_061155504.1:147..2159"
                     /db_xref="GeneID:133064946"
ORIGIN      
        1 maeeapkekg lessaapqdd lqglqdsvfs sesdnslyft ysgqsntlev rdlsyqvdma
       61 sqvpwfkqla hfkmpwtshk dsceqgiqnl sfkmrsgqml avigssgcgr aslldvitgr
      121 gpggkiksgq iwingqpsta qlvrkcvahv rqhdqllpnl tvretlafia qlrlprnfsq
      181 aqrdkrvddv iaelrlrqca ntrvgniyvr gvsggerrrv sigvqllwnp gilildepts
      241 gldsftahnl vktlsrlakg nrlvlisihq prsdifglfd lvllmtsgtt iylgtaqhmv
      301 qyfaavghpc prysnpadyy vdltsidrrs keqevatrek arslaalfke kvrgfddflw
      361 taeskepgvg tcvqspapdt npfqaptklp gplqqfaili rrqisndfrd lptllihgae
      421 aclmsliigf lyyghgavql sltdtaallf migalvpfnv ildviskchs erallyyele
      481 dglytagpyf fakilgelpe hcvyiivygm piywlanlrp glepfllhvl lvwlvvfccr
      541 amalataall ptfhmssflg nalynsfylt ggfmisldnl wtvpaliskv sflrwcfegl
      601 mkiqfgghay ymeagnitir ipgdmilssm glnsyplyai yffvigiscg fvilyylslr
      661 fikqkssqdw
//
LOCUS       XP_061011488             669 aa            linear   MAM 02-DEC-2023
DEFINITION  ATP-binding cassette sub-family G member 8 isoform X2 [Dama dama].
ACCESSION   XP_061011488
VERSION     XP_061011488.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155505.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..669
                     /product="ATP-binding cassette sub-family G member 8
                     isoform X2"
                     /calculated_mol_wt=74524
     Region          60..293
                     /region_name="ABCG_White"
                     /note="White pigment protein homolog of ABCG transporter
                     subfamily; cd03234"
                     /db_xref="CDD:213201"
     Region          86..659
                     /region_name="3a01204"
                     /note="The Eye Pigment Precursor Transporter (EPP) Family
                     protein; TIGR00955"
                     /db_xref="CDD:273361"
     Site            103..110
                     /site_type="other"
                     /note="Walker A/P-loop"
                     /db_xref="CDD:213201"
     Site            order(106..107,109..111,151,235..236,268)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:213201"
     Site            148..151
                     /site_type="other"
                     /note="Q-loop/lid"
                     /db_xref="CDD:213201"
     Site            211..220
                     /site_type="other"
                     /note="ABC transporter signature motif"
                     /db_xref="CDD:213201"
     Site            231..236
                     /site_type="other"
                     /note="Walker B"
                     /db_xref="CDD:213201"
     Site            239..242
                     /site_type="other"
                     /note="D-loop"
                     /db_xref="CDD:213201"
     Site            264..270
                     /site_type="other"
                     /note="H-loop/switch region"
                     /db_xref="CDD:213201"
     CDS             1..669
                     /gene="ABCG8"
                     /coded_by="XM_061155505.1:147..2156"
                     /db_xref="GeneID:133064946"
ORIGIN      
        1 maeeapkekg lessaapqdd lglqdsvfss esdnslyfty sgqsntlevr dlsyqvdmas
       61 qvpwfkqlah fkmpwtshkd sceqgiqnls fkmrsgqmla vigssgcgra slldvitgrg
      121 pggkiksgqi wingqpstaq lvrkcvahvr qhdqllpnlt vretlafiaq lrlprnfsqa
      181 qrdkrvddvi aelrlrqcan trvgniyvrg vsggerrrvs igvqllwnpg ilildeptsg
      241 ldsftahnlv ktlsrlakgn rlvlisihqp rsdifglfdl vllmtsgtti ylgtaqhmvq
      301 yfaavghpcp rysnpadyyv dltsidrrsk eqevatreka rslaalfkek vrgfddflwt
      361 aeskepgvgt cvqspapdtn pfqaptklpg plqqfailir rqisndfrdl ptllihgaea
      421 clmsliigfl yyghgavqls ltdtaallfm igalvpfnvi ldviskchse rallyyeled
      481 glytagpyff akilgelpeh cvyiivygmp iywlanlrpg lepfllhvll vwlvvfccra
      541 malataallp tfhmssflgn alynsfyltg gfmisldnlw tvpaliskvs flrwcfeglm
      601 kiqfgghayy meagnitiri pgdmilssmg lnsyplyaiy ffvigiscgf vilyylslrf
      661 ikqkssqdw
//
LOCUS       XP_061011489             649 aa            linear   MAM 02-DEC-2023
DEFINITION  ATP-binding cassette sub-family G member 5 [Dama dama].
ACCESSION   XP_061011489
VERSION     XP_061011489.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155506.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..649
                     /product="ATP-binding cassette sub-family G member 5"
                     /calculated_mol_wt=72772
     Region          44..643
                     /region_name="3a01204"
                     /note="The Eye Pigment Precursor Transporter (EPP) Family
                     protein; TIGR00955"
                     /db_xref="CDD:273361"
     Region          48..273
                     /region_name="ABCG_White"
                     /note="White pigment protein homolog of ABCG transporter
                     subfamily; cd03234"
                     /db_xref="CDD:213201"
     Site            84..91
                     /site_type="other"
                     /note="Walker A/P-loop"
                     /db_xref="CDD:213201"
     Site            order(87..88,90..92,132,215..216,248)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:213201"
     Site            129..132
                     /site_type="other"
                     /note="Q-loop/lid"
                     /db_xref="CDD:213201"
     Site            191..200
                     /site_type="other"
                     /note="ABC transporter signature motif"
                     /db_xref="CDD:213201"
     Site            211..216
                     /site_type="other"
                     /note="Walker B"
                     /db_xref="CDD:213201"
     Site            219..222
                     /site_type="other"
                     /note="D-loop"
                     /db_xref="CDD:213201"
     Site            244..250
                     /site_type="other"
                     /note="H-loop/switch region"
                     /db_xref="CDD:213201"
     CDS             1..649
                     /gene="ABCG5"
                     /coded_by="XM_061155506.1:141..2090"
                     /db_xref="GeneID:133064948"
ORIGIN      
        1 mgelpfltlg esselqvnrs sqcsleevpa kprhslgifh asysvshhvg pwwdiasrrq
       61 kwtrqilkdv slyvesgqim cilgssgsgk ttlldamsgr lrrtgtllge vfvngqelrr
      121 eqfqdcfsyv lqsdtllsnl tvretlnyta llairhgsqs ffqkkveavm telslshvad
      181 qlignysfgg ishgerrrvs iaaqllqdpk vmlfdepttg ldcmtanqiv vvlaelarrd
      241 riviltihqp rselfqlfdk iailscgelv fcgtpvemld ffsgcgypcp ehsnpfdfym
      301 dltsvdtqsk ereietyrrv qmiesaykes amyhktleai ertkhlktlp kipfktrdsp
      361 galsklcvll rrvmrnllrn klavtmrltq nlimglfvif fllqlgkdvl kgaiqdrvgl
      421 lyqfvgampy tgmlnavtlf pvlravsdqe sqdglyhkwq mllaymlhvl pfsviaslic
      481 csvcywtlal ypeaarfgyf svallaphli geflslvllg viqnpnvvns vvallsiagv
      541 lmgsgfvrni qempipfkil gyftfqkycs eilvvnefyg qnftcgnsna svstnpmcti
      601 tqgaqfiern cpgatsrfta nflilysfip alvilgiivf kirdylisr
//
LOCUS       XP_061011490             351 aa            linear   MAM 02-DEC-2023
DEFINITION  cytoplasmic dynein 2 light intermediate chain 1 isoform X1 [Dama
            dama].
ACCESSION   XP_061011490
VERSION     XP_061011490.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155507.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..351
                     /product="cytoplasmic dynein 2 light intermediate chain 1
                     isoform X1"
                     /calculated_mol_wt=39586
     Region          2..>268
                     /region_name="DLIC"
                     /note="Dynein light intermediate chain (DLIC); pfam05783"
                     /db_xref="CDD:368612"
     CDS             1..351
                     /gene="DYNC2LI1"
                     /coded_by="XM_061155507.1:114..1169"
                     /db_xref="GeneID:133064949"
ORIGIN      
        1 mpsetlweia kaevekrrst gsegdgvevg eksvffigsk nggkttiilr cldrdeppkp
       61 tlaleytygr rakghntpkd iahfwelggg tslldlisip itsdtlrtfs ivlvldlskp
      121 ndlwptmenl lqatklnvdk vimklgkkns kaasemrqkm wsnmqkdhpd relidpfpip
      181 lviigskydi fqdfdsekrk vicktlrfva hyygaslmft sksealllki rgvinqlafg
      241 idksksicvd qnkplfitag ldslsqigsp plpdndigkl harspmelwk kvyeklfppk
      301 sintlkdvrd paqdpqyaes evdemriqkd qeleqykrss skswkqield s
//
LOCUS       XP_061011491             325 aa            linear   MAM 02-DEC-2023
DEFINITION  cytoplasmic dynein 2 light intermediate chain 1 isoform X2 [Dama
            dama].
ACCESSION   XP_061011491
VERSION     XP_061011491.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155508.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..325
                     /product="cytoplasmic dynein 2 light intermediate chain 1
                     isoform X2"
                     /calculated_mol_wt=36525
     Region          2..>165
                     /region_name="DLIC"
                     /note="Dynein light intermediate chain (DLIC); pfam05783"
                     /db_xref="CDD:368612"
     CDS             1..325
                     /gene="DYNC2LI1"
                     /coded_by="XM_061155508.1:114..1091"
                     /db_xref="GeneID:133064949"
ORIGIN      
        1 mpsetlweia kaevekrrst gsegdgvevg eksvffigsk nggkttiilr cldrdeppkp
       61 tlaleytygr rakghntpkd iahfwelggg tslldlisip itsdtlrtfs ivlvldlskp
      121 ndlwptmenl lqatklnvdk vimklgkkns kaasemrqkm wsnmqkdhpd relidpfpip
      181 lviigskydi fqftskseal llkirgvinq lafgidksks icvdqnkplf itagldslsq
      241 igspplpdnd igklharspm elwkkvyekl fppksintlk dvrdpaqdpq yaesevdemr
      301 iqkdqeleqy krssskswkq ields
//
LOCUS       XP_061011492            1943 aa            linear   MAM 02-DEC-2023
DEFINITION  tRNA (32-2'-O)-methyltransferase regulator THADA isoform X1 [Dama
            dama].
ACCESSION   XP_061011492
VERSION     XP_061011492.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155509.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1943
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1943
                     /product="tRNA (32-2'-O)-methyltransferase regulator THADA
                     isoform X1"
                     /calculated_mol_wt=217191
     Region          435..>1477
                     /region_name="COG5543"
                     /note="Uncharacterized conserved protein [Function
                     unknown]"
                     /db_xref="CDD:227830"
     Region          940..1241
                     /region_name="DUF2428"
                     /note="THADA/TRM732, DUF2428; pfam10350"
                     /db_xref="CDD:463054"
     CDS             1..1943
                     /gene="THADA"
                     /coded_by="XM_061155509.1:243..6074"
                     /db_xref="GeneID:133064950"
ORIGIN      
        1 mgvkkkretq vtsltvchqd letlkaladv egqnlaslll hcvqltdgvs qichvkqivp
       61 llekankngt cdptirscld ilagiylsln lknplkkvla sslnglpeff lneatrsfts
      121 rlqeelntst dlysyrkvid nisscmenfd lgrssvnnll envlhflqks lieiseenrk
      181 lagnhivqtq lmndllvsir vsvmlvqkvq gsqrlhltns ptwqsmcgll smfanflsdd
      241 gllqtiqsts glavilfika mfhppekipd lissvllrsv dptsapewll scckslccad
      301 vppsallflc qgtltmldwq egrmgpsgea lllntvhvlf tlssqikest lemflsrila
      361 swtnsaiqvl dssspglkds lngnadvvrr lldyvythwe hpldalrhqt kiifrnilqm
      421 hqltvkesgs dlsadrfife ltesllqlew hskgkysclg clvdfigieh ilalaktips
      481 qilevmgdqs lvpyasdlle tmfknhkshl ksqavdstwi dkwhetwvsp llcvlcegnl
      541 dqksyvidyy lpkllncnpe slsymvkilq tsadaktgsy dsrgalgalm aclrtarahg
      601 hlqsatdawr dlvssarvkq glihqhcqvr idtlgllces nrsteivste emqwiqffit
      661 ynlnsqspgv rqqicsllkk lfcriqegsq vlykleqsks khepgnestr qdpsvslrqy
      721 knfmssicns lfealfpgss yptrfsalti lgsiaevfpv pegrvqtvyq lshdidvgrf
      781 qtlmecltgt feevkilafd llmklpktfv qfqgsvklqg lfqaalelst stkpydcvta
      841 syllnfliwq nalpsslsay lktqrvacgd gdksaavves ntlivikcll enleeevsra
      901 ensllqaaas fpmygrvhci tgalrklpln slqlvsewrp vvekllvtsy rlsaivspvi
      961 qssspeglip ndtdaesasr lhrilneiqp rdtndyfsqa kilkecgsfd ledlsvsvpn
     1021 idtsaeikgk egktcdvtaq mvlvccwrsm kevalllgsl cqllpmrpmp gspdglltve
     1081 qvkeigdyfk qhllqsrhrg afelaytgfv klteilnrcp nvslqklpee wllnvleeik
     1141 ccdpssklca trrsagipfy iqallasepk kgktdllkit mkelislagp tddsqstvpk
     1201 vhalnilral frdtrlgeii ipyvadgtka ailgftspvw avrnsstllf stlitrifgv
     1261 krgkdelskk nrmtgseffs rfpelypfll kqletvansv dsdtgelnrh psmfllllvl
     1321 grlypspmdg tcsalsmapf ipfimrcghs pvyrsremaa ralvpfvmmd eipntiqtll
     1381 aklpdctdqc frqnhihgtl lqvfhllqaf sdskyrmnty fqqeladvav ctkaklwlak
     1441 rqnpclvtra vyidilfllt ccldklskgn qpvlehlgfw eevrriisgs elitgfpyty
     1501 tvpglpqylq sltklaiaav wavaaqageq nrdvpisfsq llessfpevr lltldaller
     1561 fstaasalge kglppllwnm ggtfltlvlk enhpeclcki lkilhcldps ewlpqtehcv
     1621 hlsskefliw tmdiashers eiqsealrlt skviayhmqm cdetrdlvap nlqqwvqlvv
     1681 sscgdhlpte srlaaaevla stapffltnp qpilglqdtl alwkcvltll qseeqvvrda
     1741 atetvmtams qentcqstef afcqvdassa ldlalavlcd llqqwnqlsp glpvllgwll
     1801 gegedlvace esahqveedy pfekteinfw aetlifvkyl ykhlfrllce srgcplspem
     1861 lrhfqrtase qrhllsqlfr vlpptaeflk taeftrlriw eertlaclrl lailegedtl
     1921 vlraldssaa anqltlprte tac
//
LOCUS       XP_061011493            1943 aa            linear   MAM 02-DEC-2023
DEFINITION  tRNA (32-2'-O)-methyltransferase regulator THADA isoform X1 [Dama
            dama].
ACCESSION   XP_061011493
VERSION     XP_061011493.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155510.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1943
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1943
                     /product="tRNA (32-2'-O)-methyltransferase regulator THADA
                     isoform X1"
                     /calculated_mol_wt=217191
     Region          435..>1477
                     /region_name="COG5543"
                     /note="Uncharacterized conserved protein [Function
                     unknown]"
                     /db_xref="CDD:227830"
     Region          940..1241
                     /region_name="DUF2428"
                     /note="THADA/TRM732, DUF2428; pfam10350"
                     /db_xref="CDD:463054"
     CDS             1..1943
                     /gene="THADA"
                     /coded_by="XM_061155510.1:307..6138"
                     /db_xref="GeneID:133064950"
ORIGIN      
        1 mgvkkkretq vtsltvchqd letlkaladv egqnlaslll hcvqltdgvs qichvkqivp
       61 llekankngt cdptirscld ilagiylsln lknplkkvla sslnglpeff lneatrsfts
      121 rlqeelntst dlysyrkvid nisscmenfd lgrssvnnll envlhflqks lieiseenrk
      181 lagnhivqtq lmndllvsir vsvmlvqkvq gsqrlhltns ptwqsmcgll smfanflsdd
      241 gllqtiqsts glavilfika mfhppekipd lissvllrsv dptsapewll scckslccad
      301 vppsallflc qgtltmldwq egrmgpsgea lllntvhvlf tlssqikest lemflsrila
      361 swtnsaiqvl dssspglkds lngnadvvrr lldyvythwe hpldalrhqt kiifrnilqm
      421 hqltvkesgs dlsadrfife ltesllqlew hskgkysclg clvdfigieh ilalaktips
      481 qilevmgdqs lvpyasdlle tmfknhkshl ksqavdstwi dkwhetwvsp llcvlcegnl
      541 dqksyvidyy lpkllncnpe slsymvkilq tsadaktgsy dsrgalgalm aclrtarahg
      601 hlqsatdawr dlvssarvkq glihqhcqvr idtlgllces nrsteivste emqwiqffit
      661 ynlnsqspgv rqqicsllkk lfcriqegsq vlykleqsks khepgnestr qdpsvslrqy
      721 knfmssicns lfealfpgss yptrfsalti lgsiaevfpv pegrvqtvyq lshdidvgrf
      781 qtlmecltgt feevkilafd llmklpktfv qfqgsvklqg lfqaalelst stkpydcvta
      841 syllnfliwq nalpsslsay lktqrvacgd gdksaavves ntlivikcll enleeevsra
      901 ensllqaaas fpmygrvhci tgalrklpln slqlvsewrp vvekllvtsy rlsaivspvi
      961 qssspeglip ndtdaesasr lhrilneiqp rdtndyfsqa kilkecgsfd ledlsvsvpn
     1021 idtsaeikgk egktcdvtaq mvlvccwrsm kevalllgsl cqllpmrpmp gspdglltve
     1081 qvkeigdyfk qhllqsrhrg afelaytgfv klteilnrcp nvslqklpee wllnvleeik
     1141 ccdpssklca trrsagipfy iqallasepk kgktdllkit mkelislagp tddsqstvpk
     1201 vhalnilral frdtrlgeii ipyvadgtka ailgftspvw avrnsstllf stlitrifgv
     1261 krgkdelskk nrmtgseffs rfpelypfll kqletvansv dsdtgelnrh psmfllllvl
     1321 grlypspmdg tcsalsmapf ipfimrcghs pvyrsremaa ralvpfvmmd eipntiqtll
     1381 aklpdctdqc frqnhihgtl lqvfhllqaf sdskyrmnty fqqeladvav ctkaklwlak
     1441 rqnpclvtra vyidilfllt ccldklskgn qpvlehlgfw eevrriisgs elitgfpyty
     1501 tvpglpqylq sltklaiaav wavaaqageq nrdvpisfsq llessfpevr lltldaller
     1561 fstaasalge kglppllwnm ggtfltlvlk enhpeclcki lkilhcldps ewlpqtehcv
     1621 hlsskefliw tmdiashers eiqsealrlt skviayhmqm cdetrdlvap nlqqwvqlvv
     1681 sscgdhlpte srlaaaevla stapffltnp qpilglqdtl alwkcvltll qseeqvvrda
     1741 atetvmtams qentcqstef afcqvdassa ldlalavlcd llqqwnqlsp glpvllgwll
     1801 gegedlvace esahqveedy pfekteinfw aetlifvkyl ykhlfrllce srgcplspem
     1861 lrhfqrtase qrhllsqlfr vlpptaeflk taeftrlriw eertlaclrl lailegedtl
     1921 vlraldssaa anqltlprte tac
//
LOCUS       XP_061011494            1942 aa            linear   MAM 02-DEC-2023
DEFINITION  tRNA (32-2'-O)-methyltransferase regulator THADA isoform X2 [Dama
            dama].
ACCESSION   XP_061011494
VERSION     XP_061011494.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155511.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1942
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1942
                     /product="tRNA (32-2'-O)-methyltransferase regulator THADA
                     isoform X2"
                     /calculated_mol_wt=217104
     Region          939..1240
                     /region_name="DUF2428"
                     /note="THADA/TRM732, DUF2428; pfam10350"
                     /db_xref="CDD:463054"
     Region          <1026..>1476
                     /region_name="COG5543"
                     /note="Uncharacterized conserved protein [Function
                     unknown]"
                     /db_xref="CDD:227830"
     CDS             1..1942
                     /gene="THADA"
                     /coded_by="XM_061155511.1:244..6072"
                     /db_xref="GeneID:133064950"
ORIGIN      
        1 mgvkkkretq vtsltvchqd letlkaladv egqnlaslll hcvqltdgvs qichvkqivp
       61 llekankngt cdptirscld ilagiylsln lknplkkvla sslnglpeff lneatrsfts
      121 rlqeelntst dlysyrkvid nisscmenfd lgrssvnnll envlhflqks lieiseenrk
      181 lagnhivqtq lmndllvsir vsvmlvqkvq gsqrlhltns ptwqsmcgll smfanflsdd
      241 gllqtiqsts glavilfika mfhppekipd lissvllrsv dptsapewll scckslccad
      301 vppsallflc qgtltmldwq egrmgpsgea lllntvhvlf tlssqikest lemflsrila
      361 swtnsaiqvl dssspglkds lngnadvvrr lldyvythwe hpldalrhqt kiifrnilqm
      421 hqltvkesgs dlsadrfife ltesllqlew hskgkysclg clvdfigieh ilalaktips
      481 qilevmgdqs lvpyasdlle tmfknhkshl ksqavdstwi dkwhetwvsp llcvlcegnl
      541 dqksyvidyy lpkllncnpe slsymvkilq tsadaktgsy dsrgalgalm aclrtarahg
      601 hlqsatdawr dlvssarvkq glihqhcqvr idtlgllces nrsteivste emqwiqffit
      661 ynlnsqspgv rqqicsllkk lfcriqegsq vlykleqsks khepgnestr qdpsvslrqy
      721 knfmssicns lfealfpgss yptrfsalti lgsiaevfpv pegrvqtvyq lshdidvgrf
      781 qtlmecltgt feevkilafd llmklpktfv qfqgsvklqg lfqaalelst stkpydcvta
      841 syllnfliwq nalpsslsay lktqrvacgd gdksaavves ntlivikcll enleeevsra
      901 ensllqaaas fpmygrvhci tgalrklpln lqlvsewrpv vekllvtsyr lsaivspviq
      961 ssspeglipn dtdaesasrl hrilneiqpr dtndyfsqak ilkecgsfdl edlsvsvpni
     1021 dtsaeikgke gktcdvtaqm vlvccwrsmk evalllgslc qllpmrpmpg spdglltveq
     1081 vkeigdyfkq hllqsrhrga felaytgfvk lteilnrcpn vslqklpeew llnvleeikc
     1141 cdpssklcat rrsagipfyi qallasepkk gktdllkitm kelislagpt ddsqstvpkv
     1201 halnilralf rdtrlgeiii pyvadgtkaa ilgftspvwa vrnsstllfs tlitrifgvk
     1261 rgkdelskkn rmtgseffsr fpelypfllk qletvansvd sdtgelnrhp smfllllvlg
     1321 rlypspmdgt csalsmapfi pfimrcghsp vyrsremaar alvpfvmmde ipntiqtlla
     1381 klpdctdqcf rqnhihgtll qvfhllqafs dskyrmntyf qqeladvavc tkaklwlakr
     1441 qnpclvtrav yidilflltc cldklskgnq pvlehlgfwe evrriisgse litgfpytyt
     1501 vpglpqylqs ltklaiaavw avaaqageqn rdvpisfsql lessfpevrl ltldallerf
     1561 staasalgek glppllwnmg gtfltlvlke nhpeclckil kilhcldpse wlpqtehcvh
     1621 lsskefliwt mdiasherse iqsealrlts kviayhmqmc detrdlvapn lqqwvqlvvs
     1681 scgdhlptes rlaaaevlas tapffltnpq pilglqdtla lwkcvltllq seeqvvrdaa
     1741 tetvmtamsq entcqstefa fcqvdassal dlalavlcdl lqqwnqlspg lpvllgwllg
     1801 egedlvacee sahqveedyp fekteinfwa etlifvkyly khlfrllces rgcplspeml
     1861 rhfqrtaseq rhllsqlfrv lpptaeflkt aeftrlriwe ertlaclrll ailegedtlv
     1921 lraldssaaa nqltlprtet ac
//
LOCUS       XP_061011495            1491 aa            linear   MAM 02-DEC-2023
DEFINITION  pleckstrin homology domain-containing family H member 2 [Dama
            dama].
ACCESSION   XP_061011495
VERSION     XP_061011495.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155512.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1491
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1491
                     /product="pleckstrin homology domain-containing family H
                     member 2"
                     /calculated_mol_wt=168186
     Region          <3..363
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          <19..>170
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          705..800
                     /region_name="PH1_PLEKHH1_PLEKHH2"
                     /note="Pleckstrin homology (PH) domain containing, family
                     H (with MyTH4 domain) members 1 and 2 (PLEKHH1) PH domain,
                     repeat 1; cd13282"
                     /db_xref="CDD:241436"
     Region          815..>872
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          954..1109
                     /region_name="MyTH4"
                     /note="Domain in Myosin and Kinesin Tails; smart00139"
                     /db_xref="CDD:214535"
     Region          1119..1221
                     /region_name="FERM_F1_PLEKHH2"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain, F1 sub-domain, found in pleckstrin homology
                     domain-containing family H member 2 (PLEKHH2); cd17179"
                     /db_xref="CDD:340699"
     Region          1122..1353
                     /region_name="B41"
                     /note="Band 4.1 homologues; smart00295"
                     /db_xref="CDD:214604"
     Region          1349..1448
                     /region_name="FERM_C-lobe_PLEKHH1_PLEKHH2"
                     /note="FERM domain C-lobe of Pleckstrin homology
                     domain-containing family H; cd13206"
                     /db_xref="CDD:241360"
     Site            order(1357,1379,1381,1389)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:241360"
     Site            order(1393,1398..1401,1436,1440,1443..1444,1447)
                     /site_type="other"
                     /note="TSLC1 peptide binding site [polypeptide binding]"
                     /db_xref="CDD:241360"
     Site            1436..1447
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:241360"
     CDS             1..1491
                     /gene="PLEKHH2"
                     /coded_by="XM_061155512.1:110..4585"
                     /db_xref="GeneID:133064951"
ORIGIN      
        1 maelsetegp vdwkercval esqlmkfrvq askirellae kmqqlerqvi daerqaekaf
       61 qqvqvmeekl kaaniqtses etrlykkcqd letliqeked iiqnlelqle eqkqiriqea
      121 kiieekaaki kewvtvklne lelenqnlrl inqnqteeik tiqsklqevq gkksvvstpk
      181 lsegqrlssl tfgcflsrar sppqvvksee tskisskepe fmegkdieem eipeksvdnq
      241 iqennrgqrt lhqgpcmseq trktrtsfvm dggasqnsga pgsdwssdee dgskgrsksr
      301 ytstlsshts eegvqssrmg setyltasdd sssifeeetf gikrpehkkl yswqqeaqwk
      361 aqncplgkgn sgsrkkerds ssdelnkkfq sqrldyssss seantpspil tpalspkhpn
      421 pllgkgtelg psstlpppkl ripnifslsi alakrhlsqp qlssdrmfgt nrnaismirp
      481 lrpqetdldl vdgdnteile tmdtncddgl fsydclespc sedqeacdsa kkaacgkppt
      541 pplhrfpswe sriyavaksg irmseafnme nvhknsvvml syttsglyts liyknmttpv
      601 yttlkgkatq issspfldds sgseeedssr sssrtsesds rsrsgpgspr alkrgvslss
      661 vasesdyaip pdaystdley sqpeqkllkt cssssdngkn epleksgyll kmsgkvktwk
      721 rrwfvlkgge llyykspsdv irkpqghiel sascsilrgd nkqtvqltte khtyyltads
      781 pnileewikv lenvlrvqaa splflqpegk ptakglltkv khgyskrvwc kligktlyyf
      841 rsqedkfplg qiklweakve evdrscdsde dyeasgrsll sthytivihp keqgptylli
      901 gskhekdtwl yhltvaagsn nvnvgsefeq lvckllnieg epssqiwrhp tlchskegii
      961 splttlpsea lqteaiklfk tcqlfinaav dspaidyhis laqsalqicl thpelqneic
     1021 cqlikqtrwr qpqnqpgplq gwqllalcvg lflphhpflw llrlhlkrna dsrtefgkya
     1081 iycqrcvert qqngdrearp srmeilstll rnpyhhslpf sipvhfmngi yqvvgfdast
     1141 tveeflntln qdtgmrkpaq sgfalftddp sgrdlehclq gnikicdiis kweqaskeqq
     1201 pgkwegtrtv rltyknrlyf smqvrgeter eklllmyqtn dqivnglfpl nrdlalemaa
     1261 llaqveigdf erpfstpagh vtnqckanqt lkqviekfyp kryrddssee qlrqlcqrls
     1321 trwmalrghs aadcvriylt varkwpffga klflakpitp sslgstfmwl aihedglsil
     1381 eynsmrlivs yvykslmtfg gyqddfmvvi nnahskdkpt eklifamakp kileitllia
     1441 syinnfyqqk avhhlsapal lsaqtqgfqa rvmgsqplla ssrptkgptl l
//
LOCUS       XP_061011496             489 aa            linear   MAM 02-DEC-2023
DEFINITION  mRNA decay activator protein ZFP36L2 [Dama dama].
ACCESSION   XP_061011496
VERSION     XP_061011496.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155513.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..489
                     /product="mRNA decay activator protein ZFP36L2"
                     /calculated_mol_wt=50616
     Region          1..127
                     /region_name="Tis11B_N"
                     /note="Tis11B like protein, N terminus; pfam04553"
                     /db_xref="CDD:461350"
     Region          <150..>212
                     /region_name="CTH1"
                     /note="CCCH-type Zn-finger protein [General function
                     prediction only]; COG5063"
                     /db_xref="CDD:227395"
     CDS             1..489
                     /gene="ZFP36L2"
                     /coded_by="XM_061155513.1:296..1765"
                     /db_xref="GeneID:133064954"
ORIGIN      
        1 msttllsafy didflcktek slanlnlnnm ldkkavgtpv atapssgftp gflrrhsasn
       61 lhalahpaps pgscspkfpg aangsaaagg sasygtlkep sggggtalln kenkfrdrsf
      121 sengersqhl lhlqqqqkgg ggsqinstry ktelcrpfee sgtckygekc qfahgfhelr
      181 sltrhpkykt elcrtfhtig fcpygprchf ihnaderrpa psggasgdlr tfsardalhl
      241 gfpreprpkl hhslsfsgfp sghhqppggl espllldspt srtppppscs sasscsssas
      301 scssasaast psgaptccas aaaaaaaall ygtggaedll apgapcatcs sascannafa
      361 fgpelsslit plaiqthnfa avaaaayyrs qqqqqqglvp paqppappsa plpasaaapp
      421 sppfsfqlpr rlsespvfda ppsppdslsd rdsylsgsls sgslsgsesp gldpgrrlpi
      481 fsrlsisdd
//
LOCUS       XP_061011497             286 aa            linear   MAM 02-DEC-2023
DEFINITION  3-hydroxyanthranilate 3,4-dioxygenase isoform X1 [Dama dama].
ACCESSION   XP_061011497
VERSION     XP_061011497.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155514.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..286
                     /product="3-hydroxyanthranilate 3,4-dioxygenase isoform
                     X1"
                     /calculated_mol_wt=32223
     Region          9..159
                     /region_name="cupin_HAO"
                     /note="3-Hydroxyanthranilate-3,4-dioxygenase, cupin
                     domain; cd06123"
                     /db_xref="CDD:380378"
     Site            order(28,32,52,54,76,79..83,104,106)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:380378"
     Site            order(47,53,91,105)
                     /site_type="active"
                     /db_xref="CDD:380378"
     Region          208..>260
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
     CDS             1..286
                     /gene="HAAO"
                     /coded_by="XM_061155514.1:121..981"
                     /db_xref="GeneID:133064958"
ORIGIN      
        1 merpvkvkaw veenrgsflp pvcnkllhqk qlkimfvggp nsrkdyhiee geevfyqleg
       61 dmllrvlerg khrdvvirqg eifllpagvp hspqrfantv glvierkrlk teldglryyv
      121 gdttdvlyek wfycedlgtq lapiiqeffs seqyrtgkpn pdqllkgppf plstrsvmep
      181 mcleawldgh rkelqagtpl slfgdtyesq vmvhgqgssq glrqdvdvwl wqlegssvmt
      241 megqrlsltp ddsllvpagt lygwergqgs valsvtqdpa ckkslg
//
LOCUS       XP_061011498             258 aa            linear   MAM 02-DEC-2023
DEFINITION  3-hydroxyanthranilate 3,4-dioxygenase isoform X2 [Dama dama].
ACCESSION   XP_061011498
VERSION     XP_061011498.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155515.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..258
                     /product="3-hydroxyanthranilate 3,4-dioxygenase isoform
                     X2"
                     /calculated_mol_wt=28884
     Region          9..131
                     /region_name="cupin_HAO"
                     /note="3-Hydroxyanthranilate-3,4-dioxygenase, cupin
                     domain; cd06123"
                     /db_xref="CDD:380378"
     Site            order(47,53,63,77)
                     /site_type="active"
                     /db_xref="CDD:380378"
     Region          180..>232
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
     CDS             1..258
                     /gene="HAAO"
                     /coded_by="XM_061155515.1:123..899"
                     /db_xref="GeneID:133064958"
ORIGIN      
        1 merpvkvkaw veenrgsflp pvcnkllhqk qlkimfvggp nsrkdyhiee geeifllpag
       61 vphspqrfan tvglvierkr lkteldglry yvgdttdvly ekwfycedlg tqlapiiqef
      121 fsseqyrtgk pnpdqllkgp pfplstrsvm epmcleawld ghrkelqagt plslfgdtye
      181 sqvmvhgqgs sqglrqdvdv wlwqlegssv mtmegqrlsl tpddsllvpa gtlygwergq
      241 gsvalsvtqd packkslg
//
LOCUS       XP_061011499             376 aa            linear   MAM 02-DEC-2023
DEFINITION  oxoeicosanoid receptor 1 [Dama dama].
ACCESSION   XP_061011499
VERSION     XP_061011499.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155516.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..376
                     /product="oxoeicosanoid receptor 1"
                     /calculated_mol_wt=40434
     Region          60..328
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          62..86
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320328"
     Region          95..116
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320328"
     Region          133..155
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320328"
     Region          174..190
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320328"
     Region          213..236
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320328"
     Region          257..279
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320328"
     Region          297..322
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320328"
     CDS             1..376
                     /gene="OXER1"
                     /coded_by="XM_061155516.1:1016..2146"
                     /db_xref="GeneID:133064962"
ORIGIN      
        1 mgfpnlshps plpslspswl plslppspls sspsalttal gspgeatasc hpafspivsa
       61 llapvlgmef vlglvgnsla ffifclrsrp wtsntvflls lvvadfllil nlplrvdyyl
      121 lhetwrfgdt ackvnlfmia tnrtasvvfl tavalkvarp hhalsrasag gaarvagglw
      181 gallllnghl lltthssqsc lsyrlgtrps aslrwhqalf vvefflplal ilfaivsiml
      241 tirrrgldgq vgprramrvl aavvgvytic flpsmvfgva sivasrlrac raldlcsqlf
      301 hgslastyln svldpvlycf sspsflrqgr allglaqgwq gsdgdkstyw psarrracsr
      361 kaaatrrlqa evseee
//
LOCUS       XP_061011500             601 aa            linear   MAM 02-DEC-2023
DEFINITION  metastasis-associated protein MTA3 isoform X1 [Dama dama].
ACCESSION   XP_061011500
VERSION     XP_061011500.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155517.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..601
                     /product="metastasis-associated protein MTA3 isoform X1"
                     /calculated_mol_wt=67892
     Region          3..170
                     /region_name="BAH_MTA"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in MTA1 and similar proteins. The Metastasis-associated
                     protein MTA1 is part of the NURD (nucleosome remodeling
                     and deacetylating) complex and plays a role in cellular
                     transformation and metastasis. BAH...; cd04709"
                     /db_xref="CDD:240060"
     Region          150..201
                     /region_name="ELM2"
                     /note="ELM2 domain; pfam01448"
                     /db_xref="CDD:460214"
     Region          270..315
                     /region_name="SANT_MTA3_like"
                     /note="Myb-Like Dna-Binding Domain of MTA3 and related
                     proteins; cd11661"
                     /db_xref="CDD:212559"
     Site            order(271,301..302,304..305,307..309,311..313)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212559"
     Region          376..425
                     /region_name="ZnF_GATA"
                     /note="zinc finger binding to DNA consensus sequence
                     [AT]GATA[AG]; smart00401"
                     /db_xref="CDD:214648"
     Region          461..537
                     /region_name="MTA_R1"
                     /note="MTA R1 domain; pfam17226"
                     /db_xref="CDD:465388"
     CDS             1..601
                     /gene="MTA3"
                     /coded_by="XM_061155517.1:46..1851"
                     /db_xref="GeneID:133064963"
ORIGIN      
        1 maanmyrvgd yvyfensssn pylirrieel nktatgnvea kvvcfyrrrd isntlimlad
       61 khakeieees ettveadltd kqkhqlkhre lflsrqyesl pathirgkcs vallnetesv
      121 lsyldkedtf fyslvydpsv ktlladkgei rvgpryqadi pemllegesd ereqsklevk
      181 vwdpnspltd rqidqflvva ravgtfaral dcsssvrqps lhmsaaaasr ditlfhamdt
      241 lyrhgydlss aisvlvplgg pvlcrdemee wsaseaslfe ealekygkdf ndirqdflpw
      301 ksltsiieyy ymwkttdryv qqkrlkaaea esklkqvyip tyskpnpnqi stsngkpgav
      361 ngavgttfqp qnpllgrace scyatqshqw yswgppnmqc rlcatcwlyw kkygglkmpt
      421 qseeeklpps patedprars hmsrqamqgm pvrnsgspks avktrqaffl httyftkfar
      481 qvckntlrlr qaarrpfvpi nyaairaeya drhadlsgsp lkskstrkpl aciigyleih
      541 pskkpnvirs tpslqtpttk rmlatpnhts lsilgkrnys hhngldgslp sisscigsle
      601 l
//
LOCUS       XP_061011501             600 aa            linear   MAM 02-DEC-2023
DEFINITION  metastasis-associated protein MTA3 isoform X2 [Dama dama].
ACCESSION   XP_061011501
VERSION     XP_061011501.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155518.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..600
                     /product="metastasis-associated protein MTA3 isoform X2"
                     /calculated_mol_wt=67805
     Region          3..170
                     /region_name="BAH_MTA"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in MTA1 and similar proteins. The Metastasis-associated
                     protein MTA1 is part of the NURD (nucleosome remodeling
                     and deacetylating) complex and plays a role in cellular
                     transformation and metastasis. BAH...; cd04709"
                     /db_xref="CDD:240060"
     Region          150..201
                     /region_name="ELM2"
                     /note="ELM2 domain; pfam01448"
                     /db_xref="CDD:460214"
     Region          270..315
                     /region_name="SANT_MTA3_like"
                     /note="Myb-Like Dna-Binding Domain of MTA3 and related
                     proteins; cd11661"
                     /db_xref="CDD:212559"
     Site            order(271,301..302,304..305,307..309,311..313)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212559"
     Region          375..424
                     /region_name="ZnF_GATA"
                     /note="zinc finger binding to DNA consensus sequence
                     [AT]GATA[AG]; smart00401"
                     /db_xref="CDD:214648"
     Region          460..536
                     /region_name="MTA_R1"
                     /note="MTA R1 domain; pfam17226"
                     /db_xref="CDD:465388"
     CDS             1..600
                     /gene="MTA3"
                     /coded_by="XM_061155518.1:46..1848"
                     /db_xref="GeneID:133064963"
ORIGIN      
        1 maanmyrvgd yvyfensssn pylirrieel nktatgnvea kvvcfyrrrd isntlimlad
       61 khakeieees ettveadltd kqkhqlkhre lflsrqyesl pathirgkcs vallnetesv
      121 lsyldkedtf fyslvydpsv ktlladkgei rvgpryqadi pemllegesd ereqsklevk
      181 vwdpnspltd rqidqflvva ravgtfaral dcsssvrqps lhmsaaaasr ditlfhamdt
      241 lyrhgydlss aisvlvplgg pvlcrdemee wsaseaslfe ealekygkdf ndirqdflpw
      301 ksltsiieyy ymwkttdryv qqkrlkaaea esklkqvyip tykpnpnqis tsngkpgavn
      361 gavgttfqpq npllgraces cyatqshqwy swgppnmqcr lcatcwlywk kygglkmptq
      421 seeeklppsp atedprarsh msrqamqgmp vrnsgspksa vktrqafflh ttyftkfarq
      481 vckntlrlrq aarrpfvpin yaairaeyad rhadlsgspl kskstrkpla ciigyleihp
      541 skkpnvirst pslqtpttkr mlatpnhtsl silgkrnysh hngldgslps isscigslel
//
LOCUS       XP_061011502             598 aa            linear   MAM 02-DEC-2023
DEFINITION  metastasis-associated protein MTA3 isoform X3 [Dama dama].
ACCESSION   XP_061011502
VERSION     XP_061011502.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155519.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..598
                     /product="metastasis-associated protein MTA3 isoform X3"
                     /calculated_mol_wt=67712
     Region          3..170
                     /region_name="BAH_MTA"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in MTA1 and similar proteins. The Metastasis-associated
                     protein MTA1 is part of the NURD (nucleosome remodeling
                     and deacetylating) complex and plays a role in cellular
                     transformation and metastasis. BAH...; cd04709"
                     /db_xref="CDD:240060"
     Region          150..201
                     /region_name="ELM2"
                     /note="ELM2 domain; pfam01448"
                     /db_xref="CDD:460214"
     Region          270..315
                     /region_name="SANT_MTA3_like"
                     /note="Myb-Like Dna-Binding Domain of MTA3 and related
                     proteins; cd11661"
                     /db_xref="CDD:212559"
     Site            order(271,301..302,304..305,307..309,311..313)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212559"
     Region          376..425
                     /region_name="ZnF_GATA"
                     /note="zinc finger binding to DNA consensus sequence
                     [AT]GATA[AG]; smart00401"
                     /db_xref="CDD:214648"
     Region          461..537
                     /region_name="MTA_R1"
                     /note="MTA R1 domain; pfam17226"
                     /db_xref="CDD:465388"
     CDS             1..598
                     /gene="MTA3"
                     /coded_by="XM_061155519.1:46..1842"
                     /db_xref="GeneID:133064963"
ORIGIN      
        1 maanmyrvgd yvyfensssn pylirrieel nktatgnvea kvvcfyrrrd isntlimlad
       61 khakeieees ettveadltd kqkhqlkhre lflsrqyesl pathirgkcs vallnetesv
      121 lsyldkedtf fyslvydpsv ktlladkgei rvgpryqadi pemllegesd ereqsklevk
      181 vwdpnspltd rqidqflvva ravgtfaral dcsssvrqps lhmsaaaasr ditlfhamdt
      241 lyrhgydlss aisvlvplgg pvlcrdemee wsaseaslfe ealekygkdf ndirqdflpw
      301 ksltsiieyy ymwkttdryv qqkrlkaaea esklkqvyip tyskpnpnqi stsngkpgav
      361 ngavgttfqp qnpllgrace scyatqshqw yswgppnmqc rlcatcwlyw kkygglkmpt
      421 qseeeklpps patedprars hmsrqamqgm pvrnsgspks avktrqaffl httyftkfar
      481 qvckntlrlr qaarrpfvpi nyaairaeya drhadlsgsp lkskstrkpl aciigyleih
      541 pskkpnvirs tpslqtpttk rmlatpnhts lsilgkrnys hhngldgmil ktmtlgfa
//
LOCUS       XP_061011503             594 aa            linear   MAM 02-DEC-2023
DEFINITION  metastasis-associated protein MTA3 isoform X4 [Dama dama].
ACCESSION   XP_061011503
VERSION     XP_061011503.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155520.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..594
                     /product="metastasis-associated protein MTA3 isoform X4"
                     /calculated_mol_wt=67299
     Region          3..170
                     /region_name="BAH_MTA"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in MTA1 and similar proteins. The Metastasis-associated
                     protein MTA1 is part of the NURD (nucleosome remodeling
                     and deacetylating) complex and plays a role in cellular
                     transformation and metastasis. BAH...; cd04709"
                     /db_xref="CDD:240060"
     Region          150..201
                     /region_name="ELM2"
                     /note="ELM2 domain; pfam01448"
                     /db_xref="CDD:460214"
     Region          270..315
                     /region_name="SANT_MTA3_like"
                     /note="Myb-Like Dna-Binding Domain of MTA3 and related
                     proteins; cd11661"
                     /db_xref="CDD:212559"
     Site            order(271,301..302,304..305,307..309,311..313)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212559"
     Region          376..425
                     /region_name="ZnF_GATA"
                     /note="zinc finger binding to DNA consensus sequence
                     [AT]GATA[AG]; smart00401"
                     /db_xref="CDD:214648"
     Region          461..537
                     /region_name="MTA_R1"
                     /note="MTA R1 domain; pfam17226"
                     /db_xref="CDD:465388"
     CDS             1..594
                     /gene="MTA3"
                     /coded_by="XM_061155520.1:46..1830"
                     /db_xref="GeneID:133064963"
ORIGIN      
        1 maanmyrvgd yvyfensssn pylirrieel nktatgnvea kvvcfyrrrd isntlimlad
       61 khakeieees ettveadltd kqkhqlkhre lflsrqyesl pathirgkcs vallnetesv
      121 lsyldkedtf fyslvydpsv ktlladkgei rvgpryqadi pemllegesd ereqsklevk
      181 vwdpnspltd rqidqflvva ravgtfaral dcsssvrqps lhmsaaaasr ditlfhamdt
      241 lyrhgydlss aisvlvplgg pvlcrdemee wsaseaslfe ealekygkdf ndirqdflpw
      301 ksltsiieyy ymwkttdryv qqkrlkaaea esklkqvyip tyskpnpnqi stsngkpgav
      361 ngavgttfqp qnpllgrace scyatqshqw yswgppnmqc rlcatcwlyw kkygglkmpt
      421 qseeeklpps patedprars hmsrqamqgm pvrnsgspks avktrqaffl httyftkfar
      481 qvckntlrlr qaarrpfvpi nyaairaeya drhadlsgsp lkskstrkpl aciigyleih
      541 pskkpnvirs tpslqtpttk rmlatpnhts lsilgkrnys hhngldeltc cvsd
//
LOCUS       XP_061011504             594 aa            linear   MAM 02-DEC-2023
DEFINITION  metastasis-associated protein MTA3 isoform X5 [Dama dama].
ACCESSION   XP_061011504
VERSION     XP_061011504.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155521.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..594
                     /product="metastasis-associated protein MTA3 isoform X5"
                     /calculated_mol_wt=67221
     Region          3..170
                     /region_name="BAH_MTA"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in MTA1 and similar proteins. The Metastasis-associated
                     protein MTA1 is part of the NURD (nucleosome remodeling
                     and deacetylating) complex and plays a role in cellular
                     transformation and metastasis. BAH...; cd04709"
                     /db_xref="CDD:240060"
     Region          150..201
                     /region_name="ELM2"
                     /note="ELM2 domain; pfam01448"
                     /db_xref="CDD:460214"
     Region          270..315
                     /region_name="SANT_MTA3_like"
                     /note="Myb-Like Dna-Binding Domain of MTA3 and related
                     proteins; cd11661"
                     /db_xref="CDD:212559"
     Site            order(271,301..302,304..305,307..309,311..313)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212559"
     Region          376..425
                     /region_name="ZnF_GATA"
                     /note="zinc finger binding to DNA consensus sequence
                     [AT]GATA[AG]; smart00401"
                     /db_xref="CDD:214648"
     Region          461..537
                     /region_name="MTA_R1"
                     /note="MTA R1 domain; pfam17226"
                     /db_xref="CDD:465388"
     CDS             1..594
                     /gene="MTA3"
                     /coded_by="XM_061155521.1:46..1830"
                     /db_xref="GeneID:133064963"
ORIGIN      
        1 maanmyrvgd yvyfensssn pylirrieel nktatgnvea kvvcfyrrrd isntlimlad
       61 khakeieees ettveadltd kqkhqlkhre lflsrqyesl pathirgkcs vallnetesv
      121 lsyldkedtf fyslvydpsv ktlladkgei rvgpryqadi pemllegesd ereqsklevk
      181 vwdpnspltd rqidqflvva ravgtfaral dcsssvrqps lhmsaaaasr ditlfhamdt
      241 lyrhgydlss aisvlvplgg pvlcrdemee wsaseaslfe ealekygkdf ndirqdflpw
      301 ksltsiieyy ymwkttdryv qqkrlkaaea esklkqvyip tyskpnpnqi stsngkpgav
      361 ngavgttfqp qnpllgrace scyatqshqw yswgppnmqc rlcatcwlyw kkygglkmpt
      421 qseeeklpps patedprars hmsrqamqgm pvrnsgspks avktrqaffl httyftkfar
      481 qvckntlrlr qaarrpfvpi nyaairaeya drhadlsgsp lkskstrkpl aciigyleih
      541 pskkpnvirs tpslqtpttk rmlatpnhts lsilgkrnys hhngldggtd ksar
//
LOCUS       XP_061011505             514 aa            linear   MAM 02-DEC-2023
DEFINITION  metastasis-associated protein MTA3 isoform X6 [Dama dama].
ACCESSION   XP_061011505
VERSION     XP_061011505.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155522.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..514
                     /product="metastasis-associated protein MTA3 isoform X6"
                     /calculated_mol_wt=58550
     Region          3..170
                     /region_name="BAH_MTA"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in MTA1 and similar proteins. The Metastasis-associated
                     protein MTA1 is part of the NURD (nucleosome remodeling
                     and deacetylating) complex and plays a role in cellular
                     transformation and metastasis. BAH...; cd04709"
                     /db_xref="CDD:240060"
     Region          150..201
                     /region_name="ELM2"
                     /note="ELM2 domain; pfam01448"
                     /db_xref="CDD:460214"
     Region          270..315
                     /region_name="SANT_MTA3_like"
                     /note="Myb-Like Dna-Binding Domain of MTA3 and related
                     proteins; cd11661"
                     /db_xref="CDD:212559"
     Site            order(271,301..302,304..305,307..309,311..313)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212559"
     Region          375..424
                     /region_name="ZnF_GATA"
                     /note="zinc finger binding to DNA consensus sequence
                     [AT]GATA[AG]; smart00401"
                     /db_xref="CDD:214648"
     Region          460..>508
                     /region_name="MTA_R1"
                     /note="MTA R1 domain; pfam17226"
                     /db_xref="CDD:465388"
     CDS             1..514
                     /gene="MTA3"
                     /coded_by="XM_061155522.1:46..1590"
                     /db_xref="GeneID:133064963"
ORIGIN      
        1 maanmyrvgd yvyfensssn pylirrieel nktatgnvea kvvcfyrrrd isntlimlad
       61 khakeieees ettveadltd kqkhqlkhre lflsrqyesl pathirgkcs vallnetesv
      121 lsyldkedtf fyslvydpsv ktlladkgei rvgpryqadi pemllegesd ereqsklevk
      181 vwdpnspltd rqidqflvva ravgtfaral dcsssvrqps lhmsaaaasr ditlfhamdt
      241 lyrhgydlss aisvlvplgg pvlcrdemee wsaseaslfe ealekygkdf ndirqdflpw
      301 ksltsiieyy ymwkttdryv qqkrlkaaea esklkqvyip tykpnpnqis tsngkpgavn
      361 gavgttfqpq npllgraces cyatqshqwy swgppnmqcr lcatcwlywk kygglkmptq
      421 seeeklppsp atedprarsh msrqamqgmp vrnsgspksa vktrqafflh ttyftkfarq
      481 vckntlrlrq aarrpfvpin yaairaeckm llns
//
LOCUS       XP_061011506             436 aa            linear   MAM 02-DEC-2023
DEFINITION  potassium voltage-gated channel subfamily G member 3 isoform X1
            [Dama dama].
ACCESSION   XP_061011506
VERSION     XP_061011506.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155523.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..436
                     /product="potassium voltage-gated channel subfamily G
                     member 3 isoform X1"
                     /calculated_mol_wt=49340
     Region          11..122
                     /region_name="BTB_POZ_KCNG3"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in potassium
                     voltage-gated channel subfamily G member 3 (KCNG3);
                     cd18422"
                     /db_xref="CDD:349729"
     Site            order(14,16..23,26,62,64..65,68,71,75,78,82,84,92..93,96)
                     /site_type="other"
                     /note="putative tetramer interface [polypeptide binding]"
                     /db_xref="CDD:349729"
     Region          219..420
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     CDS             1..436
                     /gene="KCNG3"
                     /coded_by="XM_061155523.1:1..1311"
                     /db_xref="GeneID:133064965"
ORIGIN      
        1 mtfgrsgaas vvlnvggary slsrellkdf plrrvsrlhg crserdvlev cddydherne
       61 yffdrhseaf gfillyvrgh gklrfaprmc elsfynemiy wglegahley ccqrrlddrm
      121 sdtytfytae epgalgrdea rpggaeaaps rrwlermrrt feeptsslaa qilasvsvvf
      181 vivsmvvlca stlpdwraaa adnrslddrs rysagpgrep sgiieaicig wftaecivrf
      241 ivsknkcefv krplniidll aitpyyisvl mtvftgensq lqragvtlrv lrmmrifwvi
      301 klarhfiglq tlgltlkrcy remvmllvfi cvamaifsal sqllehgldl etsnkdfasi
      361 paacwwviis mttvgygdmy pitvpgrilg gvcvvsgivl lalpitfiyh sfvqcyhelk
      421 frsarysrsl saefln
//
LOCUS       XP_061011507             425 aa            linear   MAM 02-DEC-2023
DEFINITION  potassium voltage-gated channel subfamily G member 3 isoform X2
            [Dama dama].
ACCESSION   XP_061011507
VERSION     XP_061011507.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155524.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..425
                     /product="potassium voltage-gated channel subfamily G
                     member 3 isoform X2"
                     /calculated_mol_wt=48280
     Region          11..122
                     /region_name="BTB_POZ_KCNG3"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in potassium
                     voltage-gated channel subfamily G member 3 (KCNG3);
                     cd18422"
                     /db_xref="CDD:349729"
     Site            order(14,16..23,26,62,64..65,68,71,75,78,82,84,92..93,96)
                     /site_type="other"
                     /note="putative tetramer interface [polypeptide binding]"
                     /db_xref="CDD:349729"
     Region          202..409
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     CDS             1..425
                     /gene="KCNG3"
                     /coded_by="XM_061155524.1:1..1278"
                     /db_xref="GeneID:133064965"
ORIGIN      
        1 mtfgrsgaas vvlnvggary slsrellkdf plrrvsrlhg crserdvlev cddydherne
       61 yffdrhseaf gfillyvrgh gklrfaprmc elsfynemiy wglegahley ccqrrlddrm
      121 sdtytfytae epgalgrdea rpggaeaaps rrwlermrrt feeptsslaa qilasvsvvf
      181 vivsmvvlca stlpdwraaa adnrslddrs riieaicigw ftaecivrfi vsknkcefvk
      241 rplniidlla itpyyisvlm tvftgensql qragvtlrvl rmmrifwvik larhfiglqt
      301 lgltlkrcyr emvmllvfic vamaifsals qllehgldle tsnkdfasip aacwwviism
      361 ttvgygdmyp itvpgrilgg vcvvsgivll alpitfiyhs fvqcyhelkf rsarysrsls
      421 aefln
//
LOCUS       XP_061011508             114 aa            linear   MAM 02-DEC-2023
DEFINITION  cytochrome c oxidase subunit 7A-related protein, mitochondrial
            [Dama dama].
ACCESSION   XP_061011508
VERSION     XP_061011508.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155525.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..114
                     /product="cytochrome c oxidase subunit 7A-related protein,
                     mitochondrial"
                     /calculated_mol_wt=12431
     Region          56..109
                     /region_name="Cyt_c_Oxidase_VIIa"
                     /note="Cytochrome c oxidase subunit VIIa. Cytochrome c
                     oxidase (CcO), the terminal oxidase in the respiratory
                     chains of eukaryotes and most bacteria, is a multi-chain
                     transmembrane protein located in the inner membrane of
                     mitochondria and the cell membrane of...; cd00928"
                     /db_xref="CDD:238468"
     Site            order(58,60,64,68)
                     /site_type="other"
                     /note="Subunit VIIa/Vb interface [polypeptide binding]"
                     /db_xref="CDD:238468"
     Site            order(60,63..64,67..68,75..76,83,86,90)
                     /site_type="other"
                     /note="Subunit VIIa/III interface [polypeptide binding]"
                     /db_xref="CDD:238468"
     Site            order(105,109)
                     /site_type="other"
                     /note="Subunit VIIa/I interface [polypeptide binding]"
                     /db_xref="CDD:238468"
     Site            109
                     /site_type="other"
                     /note="Subunit VIIa/VIIc interface [polypeptide binding]"
                     /db_xref="CDD:238468"
     CDS             1..114
                     /gene="LOC133064966"
                     /coded_by="XM_061155525.1:295..639"
                     /db_xref="GeneID:133064966"
ORIGIN      
        1 myykfsgftq klagawasda yspqglrpvv steappiifa tptklssssi aydyagkntv
       61 pelqkffqks dgvpvhlkrg lpdqmlyrtt maltvggtly clialymasr prsk
//
LOCUS       XP_061011509            1006 aa            linear   MAM 02-DEC-2023
DEFINITION  echinoderm microtubule-associated protein-like 4 isoform X1 [Dama
            dama].
ACCESSION   XP_061011509
VERSION     XP_061011509.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155526.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1006
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1006
                     /product="echinoderm microtubule-associated protein-like 4
                     isoform X1"
                     /calculated_mol_wt=111464
     Region          20..78
                     /region_name="TD_EMAP4"
                     /note="trimerization domain of echinoderm
                     microtubule-associated protein-like 4; cd21950"
                     /db_xref="CDD:409271"
     Site            order(34..35,37..38,41..42,44..46,48..49,51..52,55..56,
                     58..59,62..63,65..67,69..70,72)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:409271"
     Region          253..321
                     /region_name="HELP"
                     /note="HELP motif; pfam03451"
                     /db_xref="CDD:460922"
     Region          328..681
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(333,351,360,371..372,386..387,406,413,419..420,
                     432..433,451,456,461..462,480,497,507..508,532..533,551,
                     555,561..562,615..616,633,638,644..645,675,679)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          337..383
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          392..434
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          437..478
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          485..532
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          533..889
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          537..581
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          621..658
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          661..694
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          702..743
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          749..773
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          817..854
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          862..889
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..1006
                     /gene="EML4"
                     /coded_by="XM_061155526.1:295..3315"
                     /db_xref="GeneID:133064967"
ORIGIN      
        1 medslpglas vcasstlsnf ctddsisats tsdvqdrlsa lelrvqqqed eitvlkaala
       61 dvlrrlaise dhvasvkksv pskgqpglre aismscitng sgtnrkpsht ssvsiarket
      121 lssaaksgte kkkekpqghr ekkedshsnd qspqirasps pqpssqplqi hrqtqeskns
      181 tptksikrpp taekshnswe nsddsrnkll ravstsklis kvikntdkhk dviinqakms
      241 treknsqege yikmfmrgrp itmfipsdvd nyddirtelp peklklewvy gyrgkdcran
      301 vyllptgeiv yfiasvvvlf nyeertqrhy lghtdcvkcl aihpdkiria tgqiagvdkd
      361 grplqphvrv wdsvslstlq iiglgtferg vgcldfskad sgvhlcvidd snehmltvwd
      421 wqkkskgaei kttnevvlav gfhptdanii itcgkshiff wtwsgnsltk kqgvfgkyek
      481 pkfvqclafl gngdvlagds ggviliwskt tveptpgkgp kgvyqiskqi kahdgsvftl
      541 cqmrngmllt gggkdrkiil wdhdlnpere ievpdqygti ravaegkadq flvgtsrnfi
      601 lrgtfndgfq ievqghtdel wglathpfkd llltcaqdrq vcmwnsvehr lewtrlvdep
      661 ghcadfhpgg tvvavgthsg rwfvldaesr dlvsihtdgn eqlsvmrysv dgtllavgsh
      721 dnfiylyavs engrkysrhg kctghssyit hldwspdnky imsnsgdyei lywdiehgck
      781 lirnrseckd inwttytcvl gfqvfgvwpe gsdgtdinal vrshnrrvia vaddfckvhl
      841 fqypcskaka pshkysahss hvtnvsfthn dshlistggk dmsiiqwklv eklplpqnet
      901 ladppltrap pssiesvvqs dtptpppsqp lnetaeeesr isssptllen sleqtvepse
      961 dhseeqsegg sedlgepvye elaselseeq skaalpgdqq dpssls
//
LOCUS       XP_061011510             995 aa            linear   MAM 02-DEC-2023
DEFINITION  echinoderm microtubule-associated protein-like 4 isoform X2 [Dama
            dama].
ACCESSION   XP_061011510
VERSION     XP_061011510.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155527.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..995
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..995
                     /product="echinoderm microtubule-associated protein-like 4
                     isoform X2"
                     /calculated_mol_wt=110203
     Region          20..78
                     /region_name="TD_EMAP4"
                     /note="trimerization domain of echinoderm
                     microtubule-associated protein-like 4; cd21950"
                     /db_xref="CDD:409271"
     Site            order(34..35,37..38,41..42,44..46,48..49,51..52,55..56,
                     58..59,62..63,65..67,69..70,72)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:409271"
     Region          242..310
                     /region_name="HELP"
                     /note="HELP motif; pfam03451"
                     /db_xref="CDD:460922"
     Region          317..670
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(322,340,349,360..361,375..376,395,402,408..409,
                     421..422,440,445,450..451,469,486,496..497,521..522,540,
                     544,550..551,604..605,622,627,633..634,664,668)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          326..372
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          381..423
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          426..467
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          474..521
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          522..878
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          526..570
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          610..647
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          650..683
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          691..732
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          738..762
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          806..843
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          851..878
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..995
                     /gene="EML4"
                     /coded_by="XM_061155527.1:295..3282"
                     /db_xref="GeneID:133064967"
ORIGIN      
        1 medslpglas vcasstlsnf ctddsisats tsdvqdrlsa lelrvqqqed eitvlkaala
       61 dvlrrlaise dhvasvkksv pskgqpglre aismscitng sgtnrkpsht ssvsiarket
      121 lssaaksgte kkkekpqghr ekkedshsnd qspqirasps pqpssqplqi hrqtqeskns
      181 tptksikrpp taekshnswe nsddsrnkll ravstsklis kvikntdkhk dviinqegey
      241 ikmfmrgrpi tmfipsdvdn yddirtelpp eklklewvyg yrgkdcranv yllptgeivy
      301 fiasvvvlfn yeertqrhyl ghtdcvkcla ihpdkiriat gqiagvdkdg rplqphvrvw
      361 dsvslstlqi iglgtfergv gcldfskads gvhlcvidds nehmltvwdw qkkskgaeik
      421 ttnevvlavg fhptdaniii tcgkshiffw twsgnsltkk qgvfgkyekp kfvqclaflg
      481 ngdvlagdsg gviliwsktt veptpgkgpk gvyqiskqik ahdgsvftlc qmrngmlltg
      541 ggkdrkiilw dhdlnperei evpdqygtir avaegkadqf lvgtsrnfil rgtfndgfqi
      601 evqghtdelw glathpfkdl lltcaqdrqv cmwnsvehrl ewtrlvdepg hcadfhpggt
      661 vvavgthsgr wfvldaesrd lvsihtdgne qlsvmrysvd gtllavgshd nfiylyavse
      721 ngrkysrhgk ctghssyith ldwspdnkyi msnsgdyeil ywdiehgckl irnrseckdi
      781 nwttytcvlg fqvfgvwpeg sdgtdinalv rshnrrviav addfckvhlf qypcskakap
      841 shkysahssh vtnvsfthnd shlistggkd msiiqwklve klplpqnetl adppltrapp
      901 ssiesvvqsd tptpppsqpl netaeeesri sssptllens leqtvepsed hseeqseggs
      961 edlgepvyee laselseeqs kaalpgdqqd pssls
//
LOCUS       XP_061011511             992 aa            linear   MAM 02-DEC-2023
DEFINITION  echinoderm microtubule-associated protein-like 4 isoform X3 [Dama
            dama].
ACCESSION   XP_061011511
VERSION     XP_061011511.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155528.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..992
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..992
                     /product="echinoderm microtubule-associated protein-like 4
                     isoform X3"
                     /calculated_mol_wt=110028
     Region          6..64
                     /region_name="TD_EMAP4"
                     /note="trimerization domain of echinoderm
                     microtubule-associated protein-like 4; cd21950"
                     /db_xref="CDD:409271"
     Site            order(20..21,23..24,27..28,30..32,34..35,37..38,41..42,
                     44..45,48..49,51..53,55..56,58)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:409271"
     Region          239..307
                     /region_name="HELP"
                     /note="HELP motif; pfam03451"
                     /db_xref="CDD:460922"
     Region          314..667
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(319,337,346,357..358,372..373,392,399,405..406,
                     418..419,437,442,447..448,466,483,493..494,518..519,537,
                     541,547..548,601..602,619,624,630..631,661,665)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          323..369
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          378..420
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          423..464
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          471..518
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          519..875
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          523..567
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          607..644
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          647..680
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          688..729
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          735..759
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          803..840
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          848..875
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..992
                     /gene="EML4"
                     /coded_by="XM_061155528.1:243..3221"
                     /db_xref="GeneID:133064967"
ORIGIN      
        1 mdgfagsldd sisatstsdv qdrlsalelr vqqqedeitv lkaaladvlr rlaisedhva
       61 svkksvpskg qpglreaism scitngsgtn rkpshtssvs iarketlssa aksgtekkke
      121 kpqghrekke dshsndqspq iraspspqps sqplqihrqt qesknstptk sikrpptaek
      181 shnswensdd srnkllravs tskliskvik ntdkhkdvii nqakmstrek nsqegeyikm
      241 fmrgrpitmf ipsdvdnydd irtelppekl klewvygyrg kdcranvyll ptgeivyfia
      301 svvvlfnyee rtqrhylght dcvkclaihp dkiriatgqi agvdkdgrpl qphvrvwdsv
      361 slstlqiigl gtfergvgcl dfskadsgvh lcviddsneh mltvwdwqkk skgaeikttn
      421 evvlavgfhp tdaniiitcg kshiffwtws gnsltkkqgv fgkyekpkfv qclaflgngd
      481 vlagdsggvi liwskttvep tpgkgpkgvy qiskqikahd gsvftlcqmr ngmlltgggk
      541 drkiilwdhd lnpereievp dqygtirava egkadqflvg tsrnfilrgt fndgfqievq
      601 ghtdelwgla thpfkdlllt caqdrqvcmw nsvehrlewt rlvdepghca dfhpggtvva
      661 vgthsgrwfv ldaesrdlvs ihtdgneqls vmrysvdgtl lavgshdnfi ylyavsengr
      721 kysrhgkctg hssyithldw spdnkyimsn sgdyeilywd iehgcklirn rseckdinwt
      781 tytcvlgfqv fgvwpegsdg tdinalvrsh nrrviavadd fckvhlfqyp cskakapshk
      841 ysahsshvtn vsfthndshl istggkdmsi iqwklveklp lpqnetladp pltrappssi
      901 esvvqsdtpt pppsqplnet aeeesrisss ptllensleq tvepsedhse eqseggsedl
      961 gepvyeelas elseeqskaa lpgdqqdpss ls
//
LOCUS       XP_061011512             250 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA-binding protein PNO1-like [Dama dama].
ACCESSION   XP_061011512
VERSION     XP_061011512.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155529.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..250
                     /product="RNA-binding protein PNO1-like"
                     /calculated_mol_wt=27509
     Region          73..152
                     /region_name="KH-I_PNO1_rpt1"
                     /note="first type I K homology (KH) RNA-binding domain
                     found in partner of NOB1 (PNO1) and similar proteins;
                     cd22391"
                     /db_xref="CDD:411819"
     Site            order(73..74,76..77,85..86,88..89,92,96,100,102,104..112,
                     117,119,123,127..128,131,135,145,147..148,150..151)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:411819"
     Site            order(82..87,111,114)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:411819"
     Region          154..249
                     /region_name="KH-I_PNO1_rpt2"
                     /note="second type I K homology (KH) RNA-binding domain
                     found in partner of NOB1 (PNO1) and similar proteins;
                     cd22392"
                     /db_xref="CDD:411820"
     Site            order(154..159,161..162,167..170,177..178,187,189,192,
                     195..196,199..201,212,215,222,226..227,230,249)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:411820"
     Site            order(175,177..178,180..182,184..188,190..192,204,219,
                     231..234,236,238,242)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:411820"
     CDS             1..250
                     /gene="LOC133064968"
                     /coded_by="XM_061155529.1:182..934"
                     /db_xref="GeneID:133064968"
ORIGIN      
        1 metvmeaqsp ltedgfcqvt rkggrrakkr qaeqpstlee ggdatsmdte earpakrpvf
       61 pplsgdgfls gkeetrkipv panrytplke nwlkiftpiv ehlglqicfn lksrnveirt
      121 cketkdvsal tkaadfvkaf ilgfqvedal alirlddlfl esfeitdvkp lkgdhlsrai
      181 griagkggkt kftienvtrt wivladvkvh ilgsfqnikm artaicnlil gnppskvygn
      241 iravasraad
//
LOCUS       XP_061011513              62 aa            linear   MAM 02-DEC-2023
DEFINITION  small nuclear ribonucleoprotein G-like [Dama dama].
ACCESSION   XP_061011513
VERSION     XP_061011513.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155530.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..62
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..62
                     /product="small nuclear ribonucleoprotein G-like"
                     /calculated_mol_wt=6791
     Region          5..62
                     /region_name="Sm_G"
                     /note="Sm protein G; cd01719"
                     /db_xref="CDD:212466"
     Site            order(17..23,25..37,39..43)
                     /site_type="other"
                     /note="Sm1 motif"
                     /db_xref="CDD:212466"
     CDS             1..62
                     /gene="LOC133064970"
                     /coded_by="XM_061155530.1:554..742"
                     /db_xref="GeneID:133064970"
ORIGIN      
        1 mskahppelk rfmdkklsli lnggrhvqgi lrgfdpfmnl videcvemat sgqqnnigiv
       61 li
//
LOCUS       XP_061011514             493 aa            linear   MAM 02-DEC-2023
DEFINITION  extracellular tyrosine-protein kinase PKDCC isoform X1 [Dama dama].
ACCESSION   XP_061011514
VERSION     XP_061011514.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155531.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..493
                     /product="extracellular tyrosine-protein kinase PKDCC
                     isoform X1"
                     /calculated_mol_wt=53998
     Region          144..>295
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(144..147,150,152,164,166,212,233..236,278,282..283,
                     285,294..295)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..493
                     /gene="PKDCC"
                     /coded_by="XM_061155531.1:16..1497"
                     /db_xref="GeneID:133064972"
ORIGIN      
        1 mrrrraavaa gfcasfllgs vlnvlfapgs epprpgqspg pspapgpgrr ggrgelarqi
       61 raryeevqry srggpgpgag rperrrlmdl apggpglqrp rpprarplpd gapgwppapg
      121 pgspgpgprl gcaalrnvsg aqylgsgytk avyrvrlpgg aavalkavdf sghdlgscvr
      181 efgarrgcyr laahkllkem vllerlrhpn vlqlygycyq dsedipdtlt titelgapve
      241 miqllqtswe drfriclslg rllhhlahsp lgsvtlldfr prqfvlvdge lkvtdlddar
      301 veetpctgnt dcilefparn ftlpcsaqgw ceamnekrnl ynayrfffty llphsappsl
      361 rplldsivna tgelswgvde tlaqlekvlh lyrsgqylqn stagsqaeyq rlpdstisqe
      421 dyrcwpsyhh ggcllsvfnl aeavdicenh aqcqafvvtn qttwtgrqlv ffktgwshvv
      481 pdpskttyvr asg
//
LOCUS       XP_061011515             464 aa            linear   MAM 02-DEC-2023
DEFINITION  extracellular tyrosine-protein kinase PKDCC isoform X2 [Dama dama].
ACCESSION   XP_061011515
VERSION     XP_061011515.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155532.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..464
                     /product="extracellular tyrosine-protein kinase PKDCC
                     isoform X2"
                     /calculated_mol_wt=50765
     Region          144..>235
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Region          <240..341
                     /region_name="PIP49_C"
                     /note="Protein-kinase domain of FAM69; pfam12260"
                     /db_xref="CDD:463512"
     CDS             1..464
                     /gene="PKDCC"
                     /coded_by="XM_061155532.1:16..1410"
                     /db_xref="GeneID:133064972"
ORIGIN      
        1 mrrrraavaa gfcasfllgs vlnvlfapgs epprpgqspg pspapgpgrr ggrgelarqi
       61 raryeevqry srggpgpgag rperrrlmdl apggpglqrp rpprarplpd gapgwppapg
      121 pgspgpgprl gcaalrnvsg aqylgsgytk avyrvrlpgg aavalkavdf sghdlgscvr
      181 efgarrgcyr laahkllkem vllerlrhpn vlqlygycyq dsedipdtlt titelgapve
      241 miqllqtswe drfrfvlvdg elkvtdldda rveetpctgn tdcilefpar nftlpcsaqg
      301 wceamnekrn lynayrffft yllphsapps lrplldsivn atgelswgvd etlaqlekvl
      361 hlyrsgqylq nstagsqaey qrlpdstisq edyrcwpsyh hggcllsvfn laeavdicen
      421 haqcqafvvt nqttwtgrql vffktgwshv vpdpskttyv rasg
//
LOCUS       XP_061011516             958 aa            linear   MAM 02-DEC-2023
DEFINITION  sodium/calcium exchanger 1 isoform X1 [Dama dama].
ACCESSION   XP_061011516
VERSION     XP_061011516.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155533.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..958
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..958
                     /product="sodium/calcium exchanger 1 isoform X1"
                     /calculated_mol_wt=106552
     Region          34..958
                     /region_name="caca"
                     /note="sodium/calcium exchanger 1; TIGR00845"
                     /db_xref="CDD:273296"
     CDS             1..958
                     /gene="SLC8A1"
                     /coded_by="XM_061155533.1:94..2970"
                     /db_xref="GeneID:133064973"
ORIGIN      
        1 mrrynlhfsl asqvgtvgtl plssmlqlsl sptlsmgfhv lamvalvfsh vdhisaetem
       61 egegnetgec tgsyyckkgv ilpiwepqdp sfgdkiarat vyfvamvymf lgvsiiadrf
      121 mssievitsq ekeitikkpn gettkttvri wnetvsnltl malgssapei llsvievcgh
      181 nftagdlgps tivgsaafnm fiiialcvyv vpdgetrkik hlrvffvtaa wsifaytwly
      241 iilsvsspgv vevweglltf fffpicvvfa wvadrrllfy kyvykryrag kqrgmiiehe
      301 gdrpssktei emdgkvvnsh vdsfldgalv levderdqdd eearremari lkelkqkhpe
      361 keieqliela nyqvlsqqqk srafyriqat rlmtgagnil krhaadqark avsmhevnte
      421 vaendpvski ffeqgtyqcl encgtvalti irrggdltnt vfvdfrtedg tanagsdyef
      481 tegtvvfkpg etqkeirvgi idddifeede nflvhlsnvk vsleasedgi legshvstla
      541 clgspstatv tifdddhagi ftfeepvthv sesigimevk vlrtsgargn vivpyktieg
      601 targggedfe dtcgelefqn deivkiitir ifdreeyeke csfslvleep kwirrgmkgg
      661 ftitdeyddk qpltskeeee rriaemgrpi lgehtrlevi ieesyefkst vdklikktnl
      721 alvvgtnswr eqfieaitvs agedddddec geeklpscfd yvmhfltvfw kvlfafvppt
      781 eywngwacfi vsilmigilt afigdlashf gctiglkdsv tavvfvalgt svpdtfaskv
      841 aatqdqyada signvtgsna vnvflgigva wsiaaiyhaa ngeqfkvspg tlafsvtlft
      901 ifafinvgvl lyrrrpeigg elggprtakl ltsclfvllw llyiffssle aychikgf
//
LOCUS       XP_061011517             934 aa            linear   MAM 02-DEC-2023
DEFINITION  sodium/calcium exchanger 1 isoform X2 [Dama dama].
ACCESSION   XP_061011517
VERSION     XP_061011517.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155534.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..934
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..934
                     /product="sodium/calcium exchanger 1 isoform X2"
                     /calculated_mol_wt=103935
     Region          1..934
                     /region_name="caca"
                     /note="sodium/calcium exchanger 1; TIGR00845"
                     /db_xref="CDD:273296"
     CDS             1..934
                     /gene="SLC8A1"
                     /coded_by="XM_061155534.1:215..3019"
                     /db_xref="GeneID:133064973"
ORIGIN      
        1 mlqlslsptl smgfhvlamv alvfshvdhi saetemegeg netgectgsy yckkgvilpi
       61 wepqdpsfgd kiaratvyfv amvymflgvs iiadrfmssi evitsqekei tikkpngett
      121 kttvriwnet vsnltlmalg ssapeillsv ievcghnfta gdlgpstivg saafnmfiii
      181 alcvyvvpdg etrkikhlrv ffvtaawsif aytwlyiils vsspgvvevw eglltffffp
      241 icvvfawvad rrllfykyvy kryragkqrg miiehegdrp sskteiemdg kvvnshvdsf
      301 ldgalvlevd erdqddeear remarilkel kqkhpekeie qlielanyqv lsqqqksraf
      361 yriqatrlmt gagnilkrha adqarkavsm hevntevaen dpvskiffeq gtyqclencg
      421 tvaltiirrg gdltntvfvd frtedgtana gsdyeftegt vvfkpgetqk eirvgiiddd
      481 ifeedenflv hlsnvkvsle asedgilegs hvstlaclgs pstatvtifd ddhagiftfe
      541 epvthvsesi gimevkvlrt sgargnvivp yktiegtarg ggedfedtcg elefqndeiv
      601 kiitirifdr eeyekecsfs lvleepkwir rgmkggftit deyddkqplt skeeeerria
      661 emgrpilgeh trleviiees yefkstvdkl ikktnlalvv gtnswreqfi eaitvsaged
      721 ddddecgeek lpscfdyvmh fltvfwkvlf afvppteywn gwacfivsil migiltafig
      781 dlashfgcti glkdsvtavv fvalgtsvpd tfaskvaatq dqyadasign vtgsnavnvf
      841 lgigvawsia aiyhaangeq fkvspgtlaf svtlftifaf invgvllyrr rpeiggelgg
      901 prtaklltsc lfvllwllyi ffssleaych ikgf
//
LOCUS       XP_061011518             934 aa            linear   MAM 02-DEC-2023
DEFINITION  sodium/calcium exchanger 1 isoform X2 [Dama dama].
ACCESSION   XP_061011518
VERSION     XP_061011518.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155535.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..934
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..934
                     /product="sodium/calcium exchanger 1 isoform X2"
                     /calculated_mol_wt=103935
     Region          1..934
                     /region_name="caca"
                     /note="sodium/calcium exchanger 1; TIGR00845"
                     /db_xref="CDD:273296"
     CDS             1..934
                     /gene="SLC8A1"
                     /coded_by="XM_061155535.1:191..2995"
                     /db_xref="GeneID:133064973"
ORIGIN      
        1 mlqlslsptl smgfhvlamv alvfshvdhi saetemegeg netgectgsy yckkgvilpi
       61 wepqdpsfgd kiaratvyfv amvymflgvs iiadrfmssi evitsqekei tikkpngett
      121 kttvriwnet vsnltlmalg ssapeillsv ievcghnfta gdlgpstivg saafnmfiii
      181 alcvyvvpdg etrkikhlrv ffvtaawsif aytwlyiils vsspgvvevw eglltffffp
      241 icvvfawvad rrllfykyvy kryragkqrg miiehegdrp sskteiemdg kvvnshvdsf
      301 ldgalvlevd erdqddeear remarilkel kqkhpekeie qlielanyqv lsqqqksraf
      361 yriqatrlmt gagnilkrha adqarkavsm hevntevaen dpvskiffeq gtyqclencg
      421 tvaltiirrg gdltntvfvd frtedgtana gsdyeftegt vvfkpgetqk eirvgiiddd
      481 ifeedenflv hlsnvkvsle asedgilegs hvstlaclgs pstatvtifd ddhagiftfe
      541 epvthvsesi gimevkvlrt sgargnvivp yktiegtarg ggedfedtcg elefqndeiv
      601 kiitirifdr eeyekecsfs lvleepkwir rgmkggftit deyddkqplt skeeeerria
      661 emgrpilgeh trleviiees yefkstvdkl ikktnlalvv gtnswreqfi eaitvsaged
      721 ddddecgeek lpscfdyvmh fltvfwkvlf afvppteywn gwacfivsil migiltafig
      781 dlashfgcti glkdsvtavv fvalgtsvpd tfaskvaatq dqyadasign vtgsnavnvf
      841 lgigvawsia aiyhaangeq fkvspgtlaf svtlftifaf invgvllyrr rpeiggelgg
      901 prtaklltsc lfvllwllyi ffssleaych ikgf
//
LOCUS       XP_061011519             934 aa            linear   MAM 02-DEC-2023
DEFINITION  sodium/calcium exchanger 1 isoform X2 [Dama dama].
ACCESSION   XP_061011519
VERSION     XP_061011519.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155536.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..934
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..934
                     /product="sodium/calcium exchanger 1 isoform X2"
                     /calculated_mol_wt=103935
     Region          1..934
                     /region_name="caca"
                     /note="sodium/calcium exchanger 1; TIGR00845"
                     /db_xref="CDD:273296"
     CDS             1..934
                     /gene="SLC8A1"
                     /coded_by="XM_061155536.1:186..2990"
                     /db_xref="GeneID:133064973"
ORIGIN      
        1 mlqlslsptl smgfhvlamv alvfshvdhi saetemegeg netgectgsy yckkgvilpi
       61 wepqdpsfgd kiaratvyfv amvymflgvs iiadrfmssi evitsqekei tikkpngett
      121 kttvriwnet vsnltlmalg ssapeillsv ievcghnfta gdlgpstivg saafnmfiii
      181 alcvyvvpdg etrkikhlrv ffvtaawsif aytwlyiils vsspgvvevw eglltffffp
      241 icvvfawvad rrllfykyvy kryragkqrg miiehegdrp sskteiemdg kvvnshvdsf
      301 ldgalvlevd erdqddeear remarilkel kqkhpekeie qlielanyqv lsqqqksraf
      361 yriqatrlmt gagnilkrha adqarkavsm hevntevaen dpvskiffeq gtyqclencg
      421 tvaltiirrg gdltntvfvd frtedgtana gsdyeftegt vvfkpgetqk eirvgiiddd
      481 ifeedenflv hlsnvkvsle asedgilegs hvstlaclgs pstatvtifd ddhagiftfe
      541 epvthvsesi gimevkvlrt sgargnvivp yktiegtarg ggedfedtcg elefqndeiv
      601 kiitirifdr eeyekecsfs lvleepkwir rgmkggftit deyddkqplt skeeeerria
      661 emgrpilgeh trleviiees yefkstvdkl ikktnlalvv gtnswreqfi eaitvsaged
      721 ddddecgeek lpscfdyvmh fltvfwkvlf afvppteywn gwacfivsil migiltafig
      781 dlashfgcti glkdsvtavv fvalgtsvpd tfaskvaatq dqyadasign vtgsnavnvf
      841 lgigvawsia aiyhaangeq fkvspgtlaf svtlftifaf invgvllyrr rpeiggelgg
      901 prtaklltsc lfvllwllyi ffssleaych ikgf
//
LOCUS       XP_061011520             934 aa            linear   MAM 02-DEC-2023
DEFINITION  sodium/calcium exchanger 1 isoform X2 [Dama dama].
ACCESSION   XP_061011520
VERSION     XP_061011520.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155537.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..934
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..934
                     /product="sodium/calcium exchanger 1 isoform X2"
                     /calculated_mol_wt=103935
     Region          1..934
                     /region_name="caca"
                     /note="sodium/calcium exchanger 1; TIGR00845"
                     /db_xref="CDD:273296"
     CDS             1..934
                     /gene="SLC8A1"
                     /coded_by="XM_061155537.1:188..2992"
                     /db_xref="GeneID:133064973"
ORIGIN      
        1 mlqlslsptl smgfhvlamv alvfshvdhi saetemegeg netgectgsy yckkgvilpi
       61 wepqdpsfgd kiaratvyfv amvymflgvs iiadrfmssi evitsqekei tikkpngett
      121 kttvriwnet vsnltlmalg ssapeillsv ievcghnfta gdlgpstivg saafnmfiii
      181 alcvyvvpdg etrkikhlrv ffvtaawsif aytwlyiils vsspgvvevw eglltffffp
      241 icvvfawvad rrllfykyvy kryragkqrg miiehegdrp sskteiemdg kvvnshvdsf
      301 ldgalvlevd erdqddeear remarilkel kqkhpekeie qlielanyqv lsqqqksraf
      361 yriqatrlmt gagnilkrha adqarkavsm hevntevaen dpvskiffeq gtyqclencg
      421 tvaltiirrg gdltntvfvd frtedgtana gsdyeftegt vvfkpgetqk eirvgiiddd
      481 ifeedenflv hlsnvkvsle asedgilegs hvstlaclgs pstatvtifd ddhagiftfe
      541 epvthvsesi gimevkvlrt sgargnvivp yktiegtarg ggedfedtcg elefqndeiv
      601 kiitirifdr eeyekecsfs lvleepkwir rgmkggftit deyddkqplt skeeeerria
      661 emgrpilgeh trleviiees yefkstvdkl ikktnlalvv gtnswreqfi eaitvsaged
      721 ddddecgeek lpscfdyvmh fltvfwkvlf afvppteywn gwacfivsil migiltafig
      781 dlashfgcti glkdsvtavv fvalgtsvpd tfaskvaatq dqyadasign vtgsnavnvf
      841 lgigvawsia aiyhaangeq fkvspgtlaf svtlftifaf invgvllyrr rpeiggelgg
      901 prtaklltsc lfvllwllyi ffssleaych ikgf
//
LOCUS       XP_061011521             934 aa            linear   MAM 02-DEC-2023
DEFINITION  sodium/calcium exchanger 1 isoform X2 [Dama dama].
ACCESSION   XP_061011521
VERSION     XP_061011521.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155538.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..934
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..934
                     /product="sodium/calcium exchanger 1 isoform X2"
                     /calculated_mol_wt=103935
     Region          1..934
                     /region_name="caca"
                     /note="sodium/calcium exchanger 1; TIGR00845"
                     /db_xref="CDD:273296"
     CDS             1..934
                     /gene="SLC8A1"
                     /coded_by="XM_061155538.1:212..3016"
                     /db_xref="GeneID:133064973"
ORIGIN      
        1 mlqlslsptl smgfhvlamv alvfshvdhi saetemegeg netgectgsy yckkgvilpi
       61 wepqdpsfgd kiaratvyfv amvymflgvs iiadrfmssi evitsqekei tikkpngett
      121 kttvriwnet vsnltlmalg ssapeillsv ievcghnfta gdlgpstivg saafnmfiii
      181 alcvyvvpdg etrkikhlrv ffvtaawsif aytwlyiils vsspgvvevw eglltffffp
      241 icvvfawvad rrllfykyvy kryragkqrg miiehegdrp sskteiemdg kvvnshvdsf
      301 ldgalvlevd erdqddeear remarilkel kqkhpekeie qlielanyqv lsqqqksraf
      361 yriqatrlmt gagnilkrha adqarkavsm hevntevaen dpvskiffeq gtyqclencg
      421 tvaltiirrg gdltntvfvd frtedgtana gsdyeftegt vvfkpgetqk eirvgiiddd
      481 ifeedenflv hlsnvkvsle asedgilegs hvstlaclgs pstatvtifd ddhagiftfe
      541 epvthvsesi gimevkvlrt sgargnvivp yktiegtarg ggedfedtcg elefqndeiv
      601 kiitirifdr eeyekecsfs lvleepkwir rgmkggftit deyddkqplt skeeeerria
      661 emgrpilgeh trleviiees yefkstvdkl ikktnlalvv gtnswreqfi eaitvsaged
      721 ddddecgeek lpscfdyvmh fltvfwkvlf afvppteywn gwacfivsil migiltafig
      781 dlashfgcti glkdsvtavv fvalgtsvpd tfaskvaatq dqyadasign vtgsnavnvf
      841 lgigvawsia aiyhaangeq fkvspgtlaf svtlftifaf invgvllyrr rpeiggelgg
      901 prtaklltsc lfvllwllyi ffssleaych ikgf
//
LOCUS       XP_061011522             934 aa            linear   MAM 02-DEC-2023
DEFINITION  sodium/calcium exchanger 1 isoform X2 [Dama dama].
ACCESSION   XP_061011522
VERSION     XP_061011522.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155539.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..934
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..934
                     /product="sodium/calcium exchanger 1 isoform X2"
                     /calculated_mol_wt=103935
     Region          1..934
                     /region_name="caca"
                     /note="sodium/calcium exchanger 1; TIGR00845"
                     /db_xref="CDD:273296"
     CDS             1..934
                     /gene="SLC8A1"
                     /coded_by="XM_061155539.1:56..2860"
                     /db_xref="GeneID:133064973"
ORIGIN      
        1 mlqlslsptl smgfhvlamv alvfshvdhi saetemegeg netgectgsy yckkgvilpi
       61 wepqdpsfgd kiaratvyfv amvymflgvs iiadrfmssi evitsqekei tikkpngett
      121 kttvriwnet vsnltlmalg ssapeillsv ievcghnfta gdlgpstivg saafnmfiii
      181 alcvyvvpdg etrkikhlrv ffvtaawsif aytwlyiils vsspgvvevw eglltffffp
      241 icvvfawvad rrllfykyvy kryragkqrg miiehegdrp sskteiemdg kvvnshvdsf
      301 ldgalvlevd erdqddeear remarilkel kqkhpekeie qlielanyqv lsqqqksraf
      361 yriqatrlmt gagnilkrha adqarkavsm hevntevaen dpvskiffeq gtyqclencg
      421 tvaltiirrg gdltntvfvd frtedgtana gsdyeftegt vvfkpgetqk eirvgiiddd
      481 ifeedenflv hlsnvkvsle asedgilegs hvstlaclgs pstatvtifd ddhagiftfe
      541 epvthvsesi gimevkvlrt sgargnvivp yktiegtarg ggedfedtcg elefqndeiv
      601 kiitirifdr eeyekecsfs lvleepkwir rgmkggftit deyddkqplt skeeeerria
      661 emgrpilgeh trleviiees yefkstvdkl ikktnlalvv gtnswreqfi eaitvsaged
      721 ddddecgeek lpscfdyvmh fltvfwkvlf afvppteywn gwacfivsil migiltafig
      781 dlashfgcti glkdsvtavv fvalgtsvpd tfaskvaatq dqyadasign vtgsnavnvf
      841 lgigvawsia aiyhaangeq fkvspgtlaf svtlftifaf invgvllyrr rpeiggelgg
      901 prtaklltsc lfvllwllyi ffssleaych ikgf
//
LOCUS       XP_061011523             501 aa            linear   MAM 02-DEC-2023
DEFINITION  THUMP domain-containing protein 2 isoform X1 [Dama dama].
ACCESSION   XP_061011523
VERSION     XP_061011523.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155540.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..501
                     /product="THUMP domain-containing protein 2 isoform X1"
                     /calculated_mol_wt=55090
     Region          18..263
                     /region_name="THUMP_AdoMetMT"
                     /note="THUMP domain associated with
                     S-adenosylmethionine-dependent methyltransferases;
                     cd11715"
                     /db_xref="CDD:212584"
     Region          273..410
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Site            order(304..310,328..329,355..357,373)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
     CDS             1..501
                     /gene="THUMPD2"
                     /coded_by="XM_061155540.1:12..1517"
                     /db_xref="GeneID:133064976"
ORIGIN      
        1 mavvpggprs gpaagahffc tagrglepfl mrevrerlaa tqveyisgkv ffttcsdlnm
       61 lkqlksaerl fllikkqlpf pvssvnkgki fnelqrlind dpeswlnais iwknllelda
      121 kkeklshkna nplkrkvged ditakklkte qiqeiqetke cqlekqieek ileqghfite
      181 gekfqeelqn diteavdtrn qsnltfrvsc rcsgaiakii taqevgrvig ialmkqfgwk
      241 adlrnpnlei fihlsdiysv lgipvfrvpl acrayiktpg lrstiawama slaeikagav
      301 vldpmcglgt illeaakewp dvyyvgadvs dsqlsgaydn lkaaglkdki ellkvsviel
      361 plpsesvdii isdipfgkkf klgkdirrtv qemervlrvg giivlllsed hhrhlkggea
      421 ssgpldfqgg hteepggeer ltgaekaavs epapsssaas sqerldrmpp lgslvpvdcy
      481 rvslgktdal iskykksysp g
//
LOCUS       XP_061011524             419 aa            linear   MAM 02-DEC-2023
DEFINITION  THUMP domain-containing protein 2 isoform X2 [Dama dama].
ACCESSION   XP_061011524
VERSION     XP_061011524.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155541.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..419
                     /product="THUMP domain-containing protein 2 isoform X2"
                     /calculated_mol_wt=46960
     Region          18..263
                     /region_name="THUMP_AdoMetMT"
                     /note="THUMP domain associated with
                     S-adenosylmethionine-dependent methyltransferases;
                     cd11715"
                     /db_xref="CDD:212584"
     Region          144..395
                     /region_name="TIGR01177"
                     /note="putative methyltransferase, TIGR01177 family"
                     /db_xref="CDD:273486"
     Region          273..>396
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Site            order(304..310,328..329,355..357,373)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
     CDS             1..419
                     /gene="THUMPD2"
                     /coded_by="XM_061155541.1:12..1271"
                     /db_xref="GeneID:133064976"
ORIGIN      
        1 mavvpggprs gpaagahffc tagrglepfl mrevrerlaa tqveyisgkv ffttcsdlnm
       61 lkqlksaerl fllikkqlpf pvssvnkgki fnelqrlind dpeswlnais iwknllelda
      121 kkeklshkna nplkrkvged ditakklkte qiqeiqetke cqlekqieek ileqghfite
      181 gekfqeelqn diteavdtrn qsnltfrvsc rcsgaiakii taqevgrvig ialmkqfgwk
      241 adlrnpnlei fihlsdiysv lgipvfrvpl acrayiktpg lrstiawama slaeikagav
      301 vldpmcglgt illeaakewp dvyyvgadvs dsqlsgaydn lkaaglkdki ellkvsviel
      361 plpsesvdii isdipfgkkf klgkdirrtv qemerretrt qkyypsqdhr aaellriyi
//
LOCUS       XP_061011525             343 aa            linear   MAM 02-DEC-2023
DEFINITION  THUMP domain-containing protein 2 isoform X3 [Dama dama].
ACCESSION   XP_061011525
VERSION     XP_061011525.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155542.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..343
                     /product="THUMP domain-containing protein 2 isoform X3"
                     /calculated_mol_wt=38329
     Region          18..263
                     /region_name="THUMP_AdoMetMT"
                     /note="THUMP domain associated with
                     S-adenosylmethionine-dependent methyltransferases;
                     cd11715"
                     /db_xref="CDD:212584"
     Region          <205..>316
                     /region_name="RlmL"
                     /note="23S rRNA G2445 N2-methylase RlmL [Translation,
                     ribosomal structure and biogenesis]; COG0116"
                     /db_xref="CDD:439886"
     Region          273..>322
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     CDS             1..343
                     /gene="THUMPD2"
                     /coded_by="XM_061155542.1:12..1043"
                     /db_xref="GeneID:133064976"
ORIGIN      
        1 mavvpggprs gpaagahffc tagrglepfl mrevrerlaa tqveyisgkv ffttcsdlnm
       61 lkqlksaerl fllikkqlpf pvssvnkgki fnelqrlind dpeswlnais iwknllelda
      121 kkeklshkna nplkrkvged ditakklkte qiqeiqetke cqlekqieek ileqghfite
      181 gekfqeelqn diteavdtrn qsnltfrvsc rcsgaiakii taqevgrvig ialmkqfgwk
      241 adlrnpnlei fihlsdiysv lgipvfrvpl acrayiktpg lrstiawama slaeikagav
      301 vldpmcglgt illeaakewp nchclqkvsi llflifhlek sls
//
LOCUS       XP_061011526             343 aa            linear   MAM 02-DEC-2023
DEFINITION  THUMP domain-containing protein 2 isoform X3 [Dama dama].
ACCESSION   XP_061011526
VERSION     XP_061011526.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155543.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..343
                     /product="THUMP domain-containing protein 2 isoform X3"
                     /calculated_mol_wt=38329
     Region          18..263
                     /region_name="THUMP_AdoMetMT"
                     /note="THUMP domain associated with
                     S-adenosylmethionine-dependent methyltransferases;
                     cd11715"
                     /db_xref="CDD:212584"
     Region          <205..>316
                     /region_name="RlmL"
                     /note="23S rRNA G2445 N2-methylase RlmL [Translation,
                     ribosomal structure and biogenesis]; COG0116"
                     /db_xref="CDD:439886"
     Region          273..>322
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     CDS             1..343
                     /gene="THUMPD2"
                     /coded_by="XM_061155543.1:12..1043"
                     /db_xref="GeneID:133064976"
ORIGIN      
        1 mavvpggprs gpaagahffc tagrglepfl mrevrerlaa tqveyisgkv ffttcsdlnm
       61 lkqlksaerl fllikkqlpf pvssvnkgki fnelqrlind dpeswlnais iwknllelda
      121 kkeklshkna nplkrkvged ditakklkte qiqeiqetke cqlekqieek ileqghfite
      181 gekfqeelqn diteavdtrn qsnltfrvsc rcsgaiakii taqevgrvig ialmkqfgwk
      241 adlrnpnlei fihlsdiysv lgipvfrvpl acrayiktpg lrstiawama slaeikagav
      301 vldpmcglgt illeaakewp nchclqkvsi llflifhlek sls
//
LOCUS       XP_061011529             268 aa            linear   MAM 02-DEC-2023
DEFINITION  THUMP domain-containing protein 2 isoform X4 [Dama dama].
ACCESSION   XP_061011529
VERSION     XP_061011529.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155546.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..268
                     /product="THUMP domain-containing protein 2 isoform X4"
                     /calculated_mol_wt=28867
     Region          40..177
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Site            order(71..77,95..96,122..124,140)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
     CDS             1..268
                     /gene="THUMPD2"
                     /coded_by="XM_061155546.1:149..955"
                     /db_xref="GeneID:133064976"
ORIGIN      
        1 mkqfgwkadl rnpnleifih lsdiysvlgi pvfrvplacr ayiktpglrs tiawamasla
       61 eikagavvld pmcglgtill eaakewpdvy yvgadvsdsq lsgaydnlka aglkdkiell
      121 kvsvielplp sesvdiiisd ipfgkkfklg kdirrtvqem ervlrvggii vlllsedhhr
      181 hlkggeassg pldfqgghte epggeerltg aekaavsepa psssaassqe rldrmpplgs
      241 lvpvdcyrvs lgktdalisk ykksyspg
//
LOCUS       XP_061011530             297 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 178A isoform X1 [Dama dama].
ACCESSION   XP_061011530
VERSION     XP_061011530.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155547.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..297
                     /product="transmembrane protein 178A isoform X1"
                     /calculated_mol_wt=32957
     Region          106..274
                     /region_name="PMP22_Claudin"
                     /note="PMP-22/EMP/MP20/Claudin family; cl21598"
                     /db_xref="CDD:473919"
     CDS             1..297
                     /gene="TMEM178A"
                     /coded_by="XM_061155547.1:87..980"
                     /db_xref="GeneID:133064978"
ORIGIN      
        1 mepralvtal slglslcslg llvtaiftdh wyetdprrhk escersraga dppdqknrlm
       61 plshlplrds pplgrrllpg gpgrtdpesw rsllglggld adcgrplfat ysglwrkcyf
      121 lgidrdidtl ilkgiaqrct aikyhfsqpi rlrnipfnlt ktiqqdewhl lhlrritagf
      181 lgmavavllc gcivatvsff weesltqhva gllflmtgif ctislctyaa sisydlnrlp
      241 kliyslpddv ehgyswsifc awcslgfiva agglciaypf isrtkiahlk sgrdstv
//
LOCUS       XP_061011531             115 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 178A isoform X2 [Dama dama].
ACCESSION   XP_061011531
VERSION     XP_061011531.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155548.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..115
                     /product="transmembrane protein 178A isoform X2"
                     /calculated_mol_wt=12422
     Region          <2..92
                     /region_name="PMP22_Claudin"
                     /note="PMP-22/EMP/MP20/Claudin family; cl21598"
                     /db_xref="CDD:473919"
     CDS             1..115
                     /gene="TMEM178A"
                     /coded_by="XM_061155548.1:166..513"
                     /db_xref="GeneID:133064978"
ORIGIN      
        1 mavavllcgc ivatvsffwe esltqhvagl lflmtgifct islctyaasi sydlnrlpkl
       61 iyslpddveh gyswsifcaw cslgfivaag glciaypfis rtkiahlksg rdstv
//
LOCUS       XP_061011532             893 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 3 isoform X1
            [Dama dama].
ACCESSION   XP_061011532
VERSION     XP_061011532.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155549.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..893
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..893
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 3 isoform X1"
                     /calculated_mol_wt=101199
     Region          15..273
                     /region_name="STKc_MAP4K3_like"
                     /note="Catalytic domain of Mitogen-activated protein
                     kinase kinase kinase kinase (MAP4K) 3-like
                     Serine/Threonine Kinases; cd06613"
                     /db_xref="CDD:270788"
     Site            order(22..26,30,43,45,74,90..93,96..97,100,136,138..141,
                     143,153..154,157,171..174,176,206,215)
                     /site_type="active"
                     /db_xref="CDD:270788"
     Site            order(22..26,30,43,45,74,90..93,96..97,100,140..141,143,
                     154)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270788"
     Site            order(25..26,136,138..140,157,171..174,176,206,215)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270788"
     Site            order(153..164,167..176)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270788"
     Region          560..873
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..893
                     /gene="MAP4K3"
                     /coded_by="XM_061155549.1:158..2839"
                     /db_xref="GeneID:133064980"
ORIGIN      
        1 mnpgfdlsrr npqedfeliq rigsgtygdv ykarnvntge laaikvikle pgedfavvqq
       61 eiimmkdckh pnivayfgsy lrrdklwicm efcgggslqd iyhvtgplse lqiayvsret
      121 lqglyylhsk gkmhrdikga nilltdnghv kladfgvsaq itatiakrks figtpywmap
      181 evaaverkgg ynqlcdlwav gitaielael qppmfdlhpm ralflmtksn fqppklkdkm
      241 kwsnsfhhfv kmaltknpkk rptaekllqh pfvtqpltrs laielldkvn npdhstyhdf
      301 ddddpeplva vphrihstsr nvreektrse infgqvkfdp plrketephh elrdsddfld
      361 sseeiyytar shldlqleyg qghqssyflg anksllksve eelhqrghva hleddegddd
      421 esknstmkak vppplppkpk sifipqeths teddnqgtik rcptsespak psqvpprppp
      481 prlppqkpva lgngvssfql ngerdgslyq qneyrgtnls rkekkdvpkp isnglpptpk
      541 vhmgacfskv fngcplkihc atswinpdtr dqylifgaee giytlnlnel hetsmeqlfp
      601 rrctwlyvmn ncllsisgka sqlyshnlpg lfdyarqmqk lpvsipahkl pdrilprkfa
      661 vsakipetkw cqkccvvrnp ytghkylcga lqtsivllew vepmqkfmli khidfpipcp
      721 lrmfemlvvp eqeyplvcvg vskgrdfnqv vrfetvnpns tsswftesdt pqtsvshvtq
      781 lerdtilvcl dccikivnlq grlkssrkls seltfdfqie sivclqdsvl afwkhgmqgr
      841 sfrsnevtqe isdstrifrl lgsdrvvvle srptdnptan snlyilaghe nsy
//
LOCUS       XP_061011533             872 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 3 isoform X2
            [Dama dama].
ACCESSION   XP_061011533
VERSION     XP_061011533.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155550.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..872
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..872
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 3 isoform X2"
                     /calculated_mol_wt=98697
     Region          15..273
                     /region_name="STKc_MAP4K3_like"
                     /note="Catalytic domain of Mitogen-activated protein
                     kinase kinase kinase kinase (MAP4K) 3-like
                     Serine/Threonine Kinases; cd06613"
                     /db_xref="CDD:270788"
     Site            order(22..26,30,43,45,74,90..93,96..97,100,136,138..141,
                     143,153..154,157,171..174,176,206,215)
                     /site_type="active"
                     /db_xref="CDD:270788"
     Site            order(22..26,30,43,45,74,90..93,96..97,100,140..141,143,
                     154)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270788"
     Site            order(25..26,136,138..140,157,171..174,176,206,215)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270788"
     Site            order(153..164,167..176)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270788"
     Region          539..852
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..872
                     /gene="MAP4K3"
                     /coded_by="XM_061155550.1:158..2776"
                     /db_xref="GeneID:133064980"
ORIGIN      
        1 mnpgfdlsrr npqedfeliq rigsgtygdv ykarnvntge laaikvikle pgedfavvqq
       61 eiimmkdckh pnivayfgsy lrrdklwicm efcgggslqd iyhvtgplse lqiayvsret
      121 lqglyylhsk gkmhrdikga nilltdnghv kladfgvsaq itatiakrks figtpywmap
      181 evaaverkgg ynqlcdlwav gitaielael qppmfdlhpm ralflmtksn fqppklkdkm
      241 kwsnsfhhfv kmaltknpkk rptaekllqh pfvtqpltrs laielldkvn npdhstyhdf
      301 ddddpeplva vphrihstsr nvreektrse infgqvkfdp plrketephh eldlqleygq
      361 ghqssyflga nksllksvee elhqrghvah leddegddde sknstmkakv ppplppkpks
      421 ifipqethst eddnqgtikr cptsespakp sqvpprpppp rlppqkpval gngvssfqln
      481 gerdgslyqq neyrgtnlsr kekkdvpkpi snglpptpkv hmgacfskvf ngcplkihca
      541 tswinpdtrd qylifgaeeg iytlnlnelh etsmeqlfpr rctwlyvmnn cllsisgkas
      601 qlyshnlpgl fdyarqmqkl pvsipahklp drilprkfav sakipetkwc qkccvvrnpy
      661 tghkylcgal qtsivllewv epmqkfmlik hidfpipcpl rmfemlvvpe qeyplvcvgv
      721 skgrdfnqvv rfetvnpnst sswftesdtp qtsvshvtql erdtilvcld ccikivnlqg
      781 rlkssrklss eltfdfqies ivclqdsvla fwkhgmqgrs frsnevtqei sdstrifrll
      841 gsdrvvvles rptdnptans nlyilaghen sy
//
LOCUS       XP_061011534             342 aa            linear   MAM 02-DEC-2023
DEFINITION  cyclin-dependent kinase-like 4 [Dama dama].
ACCESSION   XP_061011534
VERSION     XP_061011534.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155551.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..342
                     /product="cyclin-dependent kinase-like 4"
                     /calculated_mol_wt=39386
     Region          2..286
                     /region_name="STKc_CDKL1_4"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     Cyclin-Dependent protein Kinase Like 1 and 4; cd07847"
                     /db_xref="CDD:270837"
     Site            order(10..14,18,31,33,50,64,80..83,86,88..89,126,128,
                     130..131,133,144,147,158,160..163,165,203)
                     /site_type="active"
                     /db_xref="CDD:270837"
     Site            order(10..14,18,31,33,64,80..83,86,126,128,130..131,133,
                     144)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270837"
     Site            order(50,88,126,128,147,158,160..163,165,203)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270837"
     Site            order(143..152,153..154,156..165)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270837"
     CDS             1..342
                     /gene="CDKL4"
                     /coded_by="XM_061155551.1:236..1264"
                     /db_xref="GeneID:133064981"
ORIGIN      
        1 mekyeklaki gegsygvvfk crnkisgqvv aikkfvesed dpvvkkialr eirmlkqlkh
       61 pnlvnlievf rrkrkmhlvf eycdhtllne lernpngvad gviksvlwqt lqalnfchkh
      121 ncihrdvkpe nilitkqgii kicdfgfari lipgdaytdy vatrwyrape llvgdtqygs
      181 svdiwatgcv faelltgqpl wpgksdvdql yliirtlgkl iprhqsifks nqffhgisip
      241 epedmetlee kfsdvypval nfmkeclkmn pddrltcaql lespyfdsfq edqikrkarn
      301 egrnrrrqqn qllplipgsh isptpdgrkq vlqlkfdhlp ni
//
LOCUS       XP_061011535            1333 aa            linear   MAM 02-DEC-2023
DEFINITION  son of sevenless homolog 1 isoform X1 [Dama dama].
ACCESSION   XP_061011535
VERSION     XP_061011535.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155552.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1333
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1333
                     /product="son of sevenless homolog 1 isoform X1"
                     /calculated_mol_wt=152251
     Region          18..95
                     /region_name="HFD_SOS1_rpt1"
                     /note="first histone-fold domain found in son of sevenless
                     homolog 1 (SOS-1) and similar proteins; cd22914"
                     /db_xref="CDD:467039"
     Region          104..177
                     /region_name="HFD_SOS1_rpt2"
                     /note="second histone-fold domain found in son of
                     sevenless homolog 1 (SOS-1) and similar proteins; cd22915"
                     /db_xref="CDD:467040"
     Region          204..389
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; smart00325"
                     /db_xref="CDD:214619"
     Site            order(207,211,316,340..341,344..345,347..348,351..352,
                     355..356,359,384,388)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          439..545
                     /region_name="PH_SOS"
                     /note="Son of Sevenless (SOS) Pleckstrin homology (PH)
                     domain; cd01261"
                     /db_xref="CDD:269963"
     Region          597..741
                     /region_name="RasGEFN"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     GTPases; N-terminal motif; smart00229"
                     /db_xref="CDD:214571"
     Site            order(616,683,687..688,691,694..695,728..729,732,739)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:100121"
     Region          776..1015
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases. Small GTP-binding proteins of the Ras
                     superfamily function as molecular switches in fundamental
                     events such as signal transduction, cytoskeleton dynamics
                     and intracellular trafficking; cd00155"
                     /db_xref="CDD:238087"
     Site            order(809..811,821..822,824..826,828..829,832..833,836,
                     869,872..873,875..877,879..882,884..885,905,911..913,916,
                     929..931,934..936,938..940,942..945,963,967,1007,
                     1010..1011)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     Region          <1018..1319
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     CDS             1..1333
                     /gene="SOS1"
                     /coded_by="XM_061155552.1:65..4066"
                     /db_xref="GeneID:133064982"
ORIGIN      
        1 mqaqqlpyef fseenapkwr gllvpalkkv qgqvhptles sddalqyvee lilqllnmlc
       61 qaqprsasdv eervqksfph pidkwaiada qsaiekrkrr nplslpveki hpllkevlgy
      121 kidhqvsvyi vavleyisad ilklvgnyvr nirhyeitkq dikvamcadk vlmdmfhqdv
      181 edinilsltd eepstsgeqt yydlvkafma eirqyireln liikvfrepf vsnsklfsan
      241 dvenifsriv dihelsvkll ghiedtvemt degsphplvg scfedlaeel afdpyesyar
      301 dilrpgfhdr flsqlskpga alylqsigeg fkeavqyvlp rlllapvyhc lhyfellkql
      361 eeksedqedk eclkqaital lnvqsgmeki cskslakrrl sesacrfysq qmkgkqlaik
      421 kmneiqknid gwegkdigqc cnefimegtl trvgakherh iflfdglmic cksnhgqprl
      481 pgasnaeyrl kekffmrkvq indkddtsey khafeiilkd ensvifsaks aeeknnwmaa
      541 lislqyrstl ermldvtmlq eekeeqmrlp sadvyrfaep dseeniifee nvqpkagipi
      601 ikagtvikli erltyhmyad pnfvrtfltt yrsfckpqel lsliierfei pepepteadr
      661 iaiengdqpl saelkrfrke yiqpvqlrvl nvcrhwvehh fydferdadl lqrmeefigt
      721 vrgkamkkwv esitkiiqrk kiardngpgh nitfqssppt vewhisrpgh ietfdlltlh
      781 pieiarqltl lesdlyravq pselvgsvwt kedkeinspn llkmirhttn ltlwfekciv
      841 etenleerva vvsriieilq vfqelnnfng vlevvsamns spvyrldhtf eqipsrqkki
      901 leeahelsed hykkylaklr sinppcvpff giyltnilkt eegnpevlkr hgkelinfsk
      961 rrkvaeitge iqqyqnqpyc lrvesdikrf fenlnpmgss mekeftdylf nksleieprn
     1021 pkplprfpkk ynyplkspgv rpsnprpgtm rhptplqqep rkisysripe setestasap
     1081 nsprtpltpp pasgassttd vcsvfdsdhs spfhsssdtv fiqvtlphgp rsasvssisl
     1141 tkstdevpvp ppvpprrrpe sapaesspsk mmskhldspp aipprqptsk aysprysisd
     1201 rtsisdppes ppllpprepv rtpdvfsssp lhlqppplgk ksdhsnaffp nspspftppp
     1261 pqtpsphgtr rhlpsppltq evdlhsiagp pvpprqstsq hipklppkty krehthpsmh
     1321 rdgppllena hss
//
LOCUS       XP_061011536            1318 aa            linear   MAM 02-DEC-2023
DEFINITION  son of sevenless homolog 1 isoform X2 [Dama dama].
ACCESSION   XP_061011536
VERSION     XP_061011536.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155553.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1318
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1318
                     /product="son of sevenless homolog 1 isoform X2"
                     /calculated_mol_wt=150671
     Region          18..95
                     /region_name="HFD_SOS1_rpt1"
                     /note="first histone-fold domain found in son of sevenless
                     homolog 1 (SOS-1) and similar proteins; cd22914"
                     /db_xref="CDD:467039"
     Region          104..177
                     /region_name="HFD_SOS1_rpt2"
                     /note="second histone-fold domain found in son of
                     sevenless homolog 1 (SOS-1) and similar proteins; cd22915"
                     /db_xref="CDD:467040"
     Region          204..389
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; smart00325"
                     /db_xref="CDD:214619"
     Site            order(207,211,316,340..341,344..345,347..348,351..352,
                     355..356,359,384,388)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          439..545
                     /region_name="PH_SOS"
                     /note="Son of Sevenless (SOS) Pleckstrin homology (PH)
                     domain; cd01261"
                     /db_xref="CDD:269963"
     Region          597..741
                     /region_name="RasGEFN"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     GTPases; N-terminal motif; smart00229"
                     /db_xref="CDD:214571"
     Site            order(616,683,687..688,691,694..695,728..729,732,739)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:100121"
     Region          776..1015
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases. Small GTP-binding proteins of the Ras
                     superfamily function as molecular switches in fundamental
                     events such as signal transduction, cytoskeleton dynamics
                     and intracellular trafficking; cd00155"
                     /db_xref="CDD:238087"
     Site            order(809..811,821..822,824..826,828..829,832..833,836,
                     869,872..873,875..877,879..882,884..885,905,911..913,916,
                     929..931,934..936,938..940,942..945,963,967,1007,
                     1010..1011)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     Region          <1018..1304
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     CDS             1..1318
                     /gene="SOS1"
                     /coded_by="XM_061155553.1:65..4021"
                     /db_xref="GeneID:133064982"
ORIGIN      
        1 mqaqqlpyef fseenapkwr gllvpalkkv qgqvhptles sddalqyvee lilqllnmlc
       61 qaqprsasdv eervqksfph pidkwaiada qsaiekrkrr nplslpveki hpllkevlgy
      121 kidhqvsvyi vavleyisad ilklvgnyvr nirhyeitkq dikvamcadk vlmdmfhqdv
      181 edinilsltd eepstsgeqt yydlvkafma eirqyireln liikvfrepf vsnsklfsan
      241 dvenifsriv dihelsvkll ghiedtvemt degsphplvg scfedlaeel afdpyesyar
      301 dilrpgfhdr flsqlskpga alylqsigeg fkeavqyvlp rlllapvyhc lhyfellkql
      361 eeksedqedk eclkqaital lnvqsgmeki cskslakrrl sesacrfysq qmkgkqlaik
      421 kmneiqknid gwegkdigqc cnefimegtl trvgakherh iflfdglmic cksnhgqprl
      481 pgasnaeyrl kekffmrkvq indkddtsey khafeiilkd ensvifsaks aeeknnwmaa
      541 lislqyrstl ermldvtmlq eekeeqmrlp sadvyrfaep dseeniifee nvqpkagipi
      601 ikagtvikli erltyhmyad pnfvrtfltt yrsfckpqel lsliierfei pepepteadr
      661 iaiengdqpl saelkrfrke yiqpvqlrvl nvcrhwvehh fydferdadl lqrmeefigt
      721 vrgkamkkwv esitkiiqrk kiardngpgh nitfqssppt vewhisrpgh ietfdlltlh
      781 pieiarqltl lesdlyravq pselvgsvwt kedkeinspn llkmirhttn ltlwfekciv
      841 etenleerva vvsriieilq vfqelnnfng vlevvsamns spvyrldhtf eqipsrqkki
      901 leeahelsed hykkylaklr sinppcvpff giyltnilkt eegnpevlkr hgkelinfsk
      961 rrkvaeitge iqqyqnqpyc lrvesdikrf fenlnpmgss mekeftdylf nksleieprn
     1021 pkplprfpkk ynyplkspgv rpsnprpgtm rhptplqqep rkisysripe setestasap
     1081 nsprtpltpp pasgassttd vcsvfdsdhs spfhsrsasv ssisltkstd evpvpppvpp
     1141 rrrpesapae sspskmmskh ldsppaippr qptskayspr ysisdrtsis dppesppllp
     1201 prepvrtpdv fsssplhlqp pplgkksdhs naffpnspsp ftppppqtps phgtrrhlps
     1261 ppltqevdlh siagppvppr qstsqhipkl ppktykreht hpsmhrdgpp llenahss
//
LOCUS       XP_061011537            1313 aa            linear   MAM 02-DEC-2023
DEFINITION  son of sevenless homolog 1 isoform X3 [Dama dama].
ACCESSION   XP_061011537
VERSION     XP_061011537.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155554.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1313
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1313
                     /product="son of sevenless homolog 1 isoform X3"
                     /calculated_mol_wt=150023
     Region          9..75
                     /region_name="HFD_SOS1_rpt1"
                     /note="first histone-fold domain found in son of sevenless
                     homolog 1 (SOS-1) and similar proteins; cd22914"
                     /db_xref="CDD:467039"
     Region          84..157
                     /region_name="HFD_SOS1_rpt2"
                     /note="second histone-fold domain found in son of
                     sevenless homolog 1 (SOS-1) and similar proteins; cd22915"
                     /db_xref="CDD:467040"
     Region          184..369
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; smart00325"
                     /db_xref="CDD:214619"
     Site            order(187,191,296,320..321,324..325,327..328,331..332,
                     335..336,339,364,368)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          419..525
                     /region_name="PH_SOS"
                     /note="Son of Sevenless (SOS) Pleckstrin homology (PH)
                     domain; cd01261"
                     /db_xref="CDD:269963"
     Region          577..721
                     /region_name="RasGEFN"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     GTPases; N-terminal motif; smart00229"
                     /db_xref="CDD:214571"
     Site            order(596,663,667..668,671,674..675,708..709,712,719)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:100121"
     Region          756..995
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases. Small GTP-binding proteins of the Ras
                     superfamily function as molecular switches in fundamental
                     events such as signal transduction, cytoskeleton dynamics
                     and intracellular trafficking; cd00155"
                     /db_xref="CDD:238087"
     Site            order(789..791,801..802,804..806,808..809,812..813,816,
                     849,852..853,855..857,859..862,864..865,885,891..893,896,
                     909..911,914..916,918..920,922..925,943,947,987,990..991)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     Region          <998..1299
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     CDS             1..1313
                     /gene="SOS1"
                     /coded_by="XM_061155554.1:82..4023"
                     /db_xref="GeneID:133064982"
ORIGIN      
        1 mdcrrmrpkv qgqvhptles sddalqyvee lilqllnmlc qaqprsasdv eervqksfph
       61 pidkwaiada qsaiekrkrr nplslpveki hpllkevlgy kidhqvsvyi vavleyisad
      121 ilklvgnyvr nirhyeitkq dikvamcadk vlmdmfhqdv edinilsltd eepstsgeqt
      181 yydlvkafma eirqyireln liikvfrepf vsnsklfsan dvenifsriv dihelsvkll
      241 ghiedtvemt degsphplvg scfedlaeel afdpyesyar dilrpgfhdr flsqlskpga
      301 alylqsigeg fkeavqyvlp rlllapvyhc lhyfellkql eeksedqedk eclkqaital
      361 lnvqsgmeki cskslakrrl sesacrfysq qmkgkqlaik kmneiqknid gwegkdigqc
      421 cnefimegtl trvgakherh iflfdglmic cksnhgqprl pgasnaeyrl kekffmrkvq
      481 indkddtsey khafeiilkd ensvifsaks aeeknnwmaa lislqyrstl ermldvtmlq
      541 eekeeqmrlp sadvyrfaep dseeniifee nvqpkagipi ikagtvikli erltyhmyad
      601 pnfvrtfltt yrsfckpqel lsliierfei pepepteadr iaiengdqpl saelkrfrke
      661 yiqpvqlrvl nvcrhwvehh fydferdadl lqrmeefigt vrgkamkkwv esitkiiqrk
      721 kiardngpgh nitfqssppt vewhisrpgh ietfdlltlh pieiarqltl lesdlyravq
      781 pselvgsvwt kedkeinspn llkmirhttn ltlwfekciv etenleerva vvsriieilq
      841 vfqelnnfng vlevvsamns spvyrldhtf eqipsrqkki leeahelsed hykkylaklr
      901 sinppcvpff giyltnilkt eegnpevlkr hgkelinfsk rrkvaeitge iqqyqnqpyc
      961 lrvesdikrf fenlnpmgss mekeftdylf nksleieprn pkplprfpkk ynyplkspgv
     1021 rpsnprpgtm rhptplqqep rkisysripe setestasap nsprtpltpp pasgassttd
     1081 vcsvfdsdhs spfhsssdtv fiqvtlphgp rsasvssisl tkstdevpvp ppvpprrrpe
     1141 sapaesspsk mmskhldspp aipprqptsk aysprysisd rtsisdppes ppllpprepv
     1201 rtpdvfsssp lhlqppplgk ksdhsnaffp nspspftppp pqtpsphgtr rhlpsppltq
     1261 evdlhsiagp pvpprqstsq hipklppkty krehthpsmh rdgppllena hss
//
LOCUS       XP_061011538             432 aa            linear   MAM 02-DEC-2023
DEFINITION  septin-5-like [Dama dama].
ACCESSION   XP_061011538
VERSION     XP_061011538.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155555.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..432
                     /product="septin-5-like"
                     /calculated_mol_wt=49470
     Region          106..377
                     /region_name="Septin"
                     /note="pfam00735"
                     /db_xref="CDD:395596"
     Site            115..122
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206649"
     Site            order(117..123,172,175,253..254,256,312..313)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206649"
     Site            147..155
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206649"
     Site            149
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206649"
     Site            172..175
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206649"
     Site            order(174..209,210..219)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206649"
     Site            253..256
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206649"
     Site            312..314
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206649"
     CDS             1..432
                     /gene="LOC133064984"
                     /coded_by="XM_061155555.1:3079..4377"
                     /db_xref="GeneID:133064984"
ORIGIN      
        1 mnksstlfqn rnestckleq dtrdiqsilk wqerggaegp vtpqpglglg sspprprarp
       61 paatmstglr yksklatped kqdidkqyvg fatlpnqvhr ksvkkgfdft lmvagesglg
      121 kstlvhslfl tdlykerkll saeerisqtv eilkhtvdie ekgvklklti vdtpgfgdav
      181 nnsecwkpit dyvdqqfeqy frdesglnrk niqdsrvhcc lyfispfghg lrpvdvgfmk
      241 alhekvnivp liakadclvp geirklkeri reeidkfgih vyqfpecdsd ededfkqqdr
      301 elkesapfav igsntvveak gqrvrgrlyp wgivevenqa hcdfvklrnm lirthmhdlk
      361 dvtcdvhyen yrphciqmtr kltqdsrmes pipilplptp daeteklirm kdeelrrmqe
      421 mlqkmkqqmq dq
//
LOCUS       XP_061011539            1383 aa            linear   MAM 02-DEC-2023
DEFINITION  putative ATP-dependent RNA helicase DHX57 isoform X1 [Dama dama].
ACCESSION   XP_061011539
VERSION     XP_061011539.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155556.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1383
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1383
                     /product="putative ATP-dependent RNA helicase DHX57
                     isoform X1"
                     /calculated_mol_wt=155286
     Region          176..213
                     /region_name="UBA_DHX57"
                     /note="UBA domain found in putative ATP-dependent RNA
                     helicase DHX57 and similar proteins; cd14317"
                     /db_xref="CDD:270502"
     Region          237..420
                     /region_name="RWD_DHX57"
                     /note="RWD domain of DEAH box protein 57 (DHX57) and
                     related proteins; cd23825"
                     /db_xref="CDD:467661"
     Region          298..318
                     /region_name="ZnF_C3H1"
                     /note="zinc finger; smart00356"
                     /db_xref="CDD:214632"
     Region          539..>1166
                     /region_name="HrpA"
                     /note="HrpA-like RNA helicase [Translation, ribosomal
                     structure and biogenesis]; COG1643"
                     /db_xref="CDD:441249"
     Region          1210..1307
                     /region_name="OB_NTP_bind"
                     /note="Oligonucleotide/oligosaccharide-binding (OB)-fold;
                     pfam07717"
                     /db_xref="CDD:400182"
     CDS             1..1383
                     /gene="DHX57"
                     /coded_by="XM_061155556.1:257..4408"
                     /db_xref="GeneID:133064985"
ORIGIN      
        1 msssvrrkgk pgkgggkgss rggrggrsha skshgggssg ggiggnrkas sriwddgddf
       61 cifsesrhss rpsnssvrkg darpkwkpea kvplqtlhmt senqekvkal lrdlqeqdad
      121 agsergvsge eeddepdydd eqywspgrea slvpdsdple cagsglveph rpeftvsafa
      181 vhrlsrygfh tehcqaalri cdgdvgasle hlltqcfset fgermkisea vahisldecv
      241 eqrqeeafal ksicgekfie riqnrvwtig leleyltskf ckfkqkestk niqeaslevc
      301 kfylkgnckf gskckfkhev ppnqivgrve rnvddshlna nedasflyel eirfskdhky
      361 pyqaplvafy stnenlplac rlhiseflyg kaltfaetse pvvyslitll eeeseitkll
      421 tnthhkysvp pvnflpvspg irlnnpvcrk pvipsnsffs nqipevekes eaeeetdede
      481 gpapvmvede syvnlkkkis krydwqaksv haenvkickq frikqasrqf qsvlqerqsl
      541 paweerenil kvlskhqvlv isgmtgcgkt tqipqfildd slngppekva niictqprri
      601 saisvaerva keraervglt vgyqirlesv kssatrllyc ttgvllrrle gdaalqgvth
      661 iivdevhert eesdflllvl kdivlqrptl qvilmsatln aelfseyfns cpvitipgrt
      721 fpvdqffled aiavtryvlq dgspyarsmk qmskeklkar rsrtafeeve edlrlslhlq
      781 dqdsvkdavp dqqldfkqll aryqgvsksv iktmsimdfe kvnlelieal lewivdgkhs
      841 yppgailvfl pglaeikmly eqlqsnslfn nrrsnrcvih plhsslssee qqavfvkppt
      901 gvtkiiistn iaetsitidd vvyvidsgkm kekrydaskg mesledtfvs qanalqrkgr
      961 agrvasgvcf hlftshhfnh qllkqqlpei qrvpleqlcl rikilemfst hnlqsvfsrl
     1021 iepphtdslr askirlrdlg altpdetltp lgyhlaslpv dvrigklmlf gsifrcldpa
     1081 ltiaaslafk spfvspwdkk eeanqkklef afansdylal lraykgwqls mkegmrasyn
     1141 ycrqnflsgr vlqemaslkr qftellsdig fvkeglrare iekraqgggd gildatgeea
     1201 nsnaenpkli samlcaalyp nvvqvkspeg kfqktstgav rmqpksdelk fvtkndgyvh
     1261 ihpssvnyqv rrfdspylvy hekiktsrvf irdcsmvsvy plvlfgggqv nvqlqkgefv
     1321 vslddgwirf aaashqvael vkelrceldq llqdkiknps idlctcprgs riismivklv
     1381 ttq
//
LOCUS       XP_061011540            1383 aa            linear   MAM 02-DEC-2023
DEFINITION  putative ATP-dependent RNA helicase DHX57 isoform X1 [Dama dama].
ACCESSION   XP_061011540
VERSION     XP_061011540.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155557.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1383
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1383
                     /product="putative ATP-dependent RNA helicase DHX57
                     isoform X1"
                     /calculated_mol_wt=155286
     Region          176..213
                     /region_name="UBA_DHX57"
                     /note="UBA domain found in putative ATP-dependent RNA
                     helicase DHX57 and similar proteins; cd14317"
                     /db_xref="CDD:270502"
     Region          237..420
                     /region_name="RWD_DHX57"
                     /note="RWD domain of DEAH box protein 57 (DHX57) and
                     related proteins; cd23825"
                     /db_xref="CDD:467661"
     Region          298..318
                     /region_name="ZnF_C3H1"
                     /note="zinc finger; smart00356"
                     /db_xref="CDD:214632"
     Region          539..>1166
                     /region_name="HrpA"
                     /note="HrpA-like RNA helicase [Translation, ribosomal
                     structure and biogenesis]; COG1643"
                     /db_xref="CDD:441249"
     Region          1210..1307
                     /region_name="OB_NTP_bind"
                     /note="Oligonucleotide/oligosaccharide-binding (OB)-fold;
                     pfam07717"
                     /db_xref="CDD:400182"
     CDS             1..1383
                     /gene="DHX57"
                     /coded_by="XM_061155557.1:63..4214"
                     /db_xref="GeneID:133064985"
ORIGIN      
        1 msssvrrkgk pgkgggkgss rggrggrsha skshgggssg ggiggnrkas sriwddgddf
       61 cifsesrhss rpsnssvrkg darpkwkpea kvplqtlhmt senqekvkal lrdlqeqdad
      121 agsergvsge eeddepdydd eqywspgrea slvpdsdple cagsglveph rpeftvsafa
      181 vhrlsrygfh tehcqaalri cdgdvgasle hlltqcfset fgermkisea vahisldecv
      241 eqrqeeafal ksicgekfie riqnrvwtig leleyltskf ckfkqkestk niqeaslevc
      301 kfylkgnckf gskckfkhev ppnqivgrve rnvddshlna nedasflyel eirfskdhky
      361 pyqaplvafy stnenlplac rlhiseflyg kaltfaetse pvvyslitll eeeseitkll
      421 tnthhkysvp pvnflpvspg irlnnpvcrk pvipsnsffs nqipevekes eaeeetdede
      481 gpapvmvede syvnlkkkis krydwqaksv haenvkickq frikqasrqf qsvlqerqsl
      541 paweerenil kvlskhqvlv isgmtgcgkt tqipqfildd slngppekva niictqprri
      601 saisvaerva keraervglt vgyqirlesv kssatrllyc ttgvllrrle gdaalqgvth
      661 iivdevhert eesdflllvl kdivlqrptl qvilmsatln aelfseyfns cpvitipgrt
      721 fpvdqffled aiavtryvlq dgspyarsmk qmskeklkar rsrtafeeve edlrlslhlq
      781 dqdsvkdavp dqqldfkqll aryqgvsksv iktmsimdfe kvnlelieal lewivdgkhs
      841 yppgailvfl pglaeikmly eqlqsnslfn nrrsnrcvih plhsslssee qqavfvkppt
      901 gvtkiiistn iaetsitidd vvyvidsgkm kekrydaskg mesledtfvs qanalqrkgr
      961 agrvasgvcf hlftshhfnh qllkqqlpei qrvpleqlcl rikilemfst hnlqsvfsrl
     1021 iepphtdslr askirlrdlg altpdetltp lgyhlaslpv dvrigklmlf gsifrcldpa
     1081 ltiaaslafk spfvspwdkk eeanqkklef afansdylal lraykgwqls mkegmrasyn
     1141 ycrqnflsgr vlqemaslkr qftellsdig fvkeglrare iekraqgggd gildatgeea
     1201 nsnaenpkli samlcaalyp nvvqvkspeg kfqktstgav rmqpksdelk fvtkndgyvh
     1261 ihpssvnyqv rrfdspylvy hekiktsrvf irdcsmvsvy plvlfgggqv nvqlqkgefv
     1321 vslddgwirf aaashqvael vkelrceldq llqdkiknps idlctcprgs riismivklv
     1381 ttq
//
LOCUS       XP_061011541            1382 aa            linear   MAM 02-DEC-2023
DEFINITION  putative ATP-dependent RNA helicase DHX57 isoform X2 [Dama dama].
ACCESSION   XP_061011541
VERSION     XP_061011541.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155558.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1382
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1382
                     /product="putative ATP-dependent RNA helicase DHX57
                     isoform X2"
                     /calculated_mol_wt=155130
     Region          175..212
                     /region_name="UBA_DHX57"
                     /note="UBA domain found in putative ATP-dependent RNA
                     helicase DHX57 and similar proteins; cd14317"
                     /db_xref="CDD:270502"
     Region          236..419
                     /region_name="RWD_DHX57"
                     /note="RWD domain of DEAH box protein 57 (DHX57) and
                     related proteins; cd23825"
                     /db_xref="CDD:467661"
     Region          297..317
                     /region_name="ZnF_C3H1"
                     /note="zinc finger; smart00356"
                     /db_xref="CDD:214632"
     Region          538..>1165
                     /region_name="HrpA"
                     /note="HrpA-like RNA helicase [Translation, ribosomal
                     structure and biogenesis]; COG1643"
                     /db_xref="CDD:441249"
     Region          1209..1306
                     /region_name="OB_NTP_bind"
                     /note="Oligonucleotide/oligosaccharide-binding (OB)-fold;
                     pfam07717"
                     /db_xref="CDD:400182"
     CDS             1..1382
                     /gene="DHX57"
                     /coded_by="XM_061155558.1:257..4405"
                     /db_xref="GeneID:133064985"
ORIGIN      
        1 msssvrrkgk pgkgggkgss rggrggrsha skshgggssg ggiggnrkas sriwddgddf
       61 cifsesrhss rpsnssvrkg darpkwkpea kvplqtlhmt senqekvkal lrdlqeqdad
      121 agsegvsgee eddepdydde qywspgreas lvpdsdplec agsglvephr peftvsafav
      181 hrlsrygfht ehcqaalric dgdvgasleh lltqcfsetf germkiseav ahisldecve
      241 qrqeeafalk sicgekfier iqnrvwtigl eleyltskfc kfkqkestkn iqeaslevck
      301 fylkgnckfg skckfkhevp pnqivgrver nvddshlnan edasflyele irfskdhkyp
      361 yqaplvafys tnenlplacr lhiseflygk altfaetsep vvyslitlle eeseitkllt
      421 nthhkysvpp vnflpvspgi rlnnpvcrkp vipsnsffsn qipevekese aeeetdedeg
      481 papvmvedes yvnlkkkisk rydwqaksvh aenvkickqf rikqasrqfq svlqerqslp
      541 aweerenilk vlskhqvlvi sgmtgcgktt qipqfildds lngppekvan iictqprris
      601 aisvaervak eraervgltv gyqirlesvk ssatrllyct tgvllrrleg daalqgvthi
      661 ivdevherte esdflllvlk divlqrptlq vilmsatlna elfseyfnsc pvitipgrtf
      721 pvdqffleda iavtryvlqd gspyarsmkq mskeklkarr srtafeevee dlrlslhlqd
      781 qdsvkdavpd qqldfkqlla ryqgvsksvi ktmsimdfek vnlelieall ewivdgkhsy
      841 ppgailvflp glaeikmlye qlqsnslfnn rrsnrcvihp lhsslsseeq qavfvkpptg
      901 vtkiiistni aetsitiddv vyvidsgkmk ekrydaskgm esledtfvsq analqrkgra
      961 grvasgvcfh lftshhfnhq llkqqlpeiq rvpleqlclr ikilemfsth nlqsvfsrli
     1021 epphtdslra skirlrdlga ltpdetltpl gyhlaslpvd vrigklmlfg sifrcldpal
     1081 tiaaslafks pfvspwdkke eanqkklefa fansdylall raykgwqlsm kegmrasyny
     1141 crqnflsgrv lqemaslkrq ftellsdigf vkeglrarei ekraqgggdg ildatgeean
     1201 snaenpklis amlcaalypn vvqvkspegk fqktstgavr mqpksdelkf vtkndgyvhi
     1261 hpssvnyqvr rfdspylvyh ekiktsrvfi rdcsmvsvyp lvlfgggqvn vqlqkgefvv
     1321 slddgwirfa aashqvaelv kelrceldql lqdkiknpsi dlctcprgsr iismivklvt
     1381 tq
//
LOCUS       XP_061011542            1337 aa            linear   MAM 02-DEC-2023
DEFINITION  putative ATP-dependent RNA helicase DHX57 isoform X3 [Dama dama].
ACCESSION   XP_061011542
VERSION     XP_061011542.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155559.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1337
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1337
                     /product="putative ATP-dependent RNA helicase DHX57
                     isoform X3"
                     /calculated_mol_wt=150281
     Region          176..213
                     /region_name="UBA_DHX57"
                     /note="UBA domain found in putative ATP-dependent RNA
                     helicase DHX57 and similar proteins; cd14317"
                     /db_xref="CDD:270502"
     Region          237..420
                     /region_name="RWD_DHX57"
                     /note="RWD domain of DEAH box protein 57 (DHX57) and
                     related proteins; cd23825"
                     /db_xref="CDD:467661"
     Region          298..318
                     /region_name="ZnF_C3H1"
                     /note="zinc finger; smart00356"
                     /db_xref="CDD:214632"
     Region          539..>1137
                     /region_name="HrpA"
                     /note="HrpA-like RNA helicase [Translation, ribosomal
                     structure and biogenesis]; COG1643"
                     /db_xref="CDD:441249"
     Region          1164..1261
                     /region_name="OB_NTP_bind"
                     /note="Oligonucleotide/oligosaccharide-binding (OB)-fold;
                     pfam07717"
                     /db_xref="CDD:400182"
     CDS             1..1337
                     /gene="DHX57"
                     /coded_by="XM_061155559.1:257..4270"
                     /db_xref="GeneID:133064985"
ORIGIN      
        1 msssvrrkgk pgkgggkgss rggrggrsha skshgggssg ggiggnrkas sriwddgddf
       61 cifsesrhss rpsnssvrkg darpkwkpea kvplqtlhmt senqekvkal lrdlqeqdad
      121 agsergvsge eeddepdydd eqywspgrea slvpdsdple cagsglveph rpeftvsafa
      181 vhrlsrygfh tehcqaalri cdgdvgasle hlltqcfset fgermkisea vahisldecv
      241 eqrqeeafal ksicgekfie riqnrvwtig leleyltskf ckfkqkestk niqeaslevc
      301 kfylkgnckf gskckfkhev ppnqivgrve rnvddshlna nedasflyel eirfskdhky
      361 pyqaplvafy stnenlplac rlhiseflyg kaltfaetse pvvyslitll eeeseitkll
      421 tnthhkysvp pvnflpvspg irlnnpvcrk pvipsnsffs nqipevekes eaeeetdede
      481 gpapvmvede syvnlkkkis krydwqaksv haenvkickq frikqasrqf qsvlqerqsl
      541 paweerenil kvlskhqvlv isgmtgcgkt tqipqfildd slngppekva niictqprri
      601 saisvaerva keraervglt vgyqirlesv kssatrllyc ttgvllrrle gdaalqgvth
      661 iivdevhert eesdflllvl kdivlqrptl qvilmsatln aelfseyfns cpvitipgrt
      721 fpvdqffled aiavtryvlq dgspyarsmk qmskeklkar rsrtafeeve edlrlslhlq
      781 dqdsvkdavp dqqldfkqll aryqgvsksv iktmsimdfe kvnlelieal lewivdgkhs
      841 yppgailvfl pglaeikmly eqlqsnslfn nrrsnrcvih plhsslssee qqavfvkppt
      901 gvtkiiistn iaetsitidd vvyvidsgkm kekrydaskg mesledtfvs qanalqrkgr
      961 agrvasgvcf hlftshhfnh qllkqqlpei qrvpleqlcl rikilemfst hnlqsvfsrl
     1021 iepphtdslr askirlrdlg altpdetltp lgyhlaslpv dvrigklmlf gsifrcldpa
     1081 ltiaaslafk spfvspwdkk eeanqkklef afansdylal lraykgwqls mkegmrasyn
     1141 ycrqnflsgr vlqansnaen pklisamlca alypnvvqvk spegkfqkts tgavrmqpks
     1201 delkfvtknd gyvhihpssv nyqvrrfdsp ylvyhekikt srvfirdcsm vsvyplvlfg
     1261 ggqvnvqlqk gefvvslddg wirfaaashq vaelvkelrc eldqllqdki knpsidlctc
     1321 prgsriismi vklvttq
//
LOCUS       XP_061011543            1285 aa            linear   MAM 02-DEC-2023
DEFINITION  putative ATP-dependent RNA helicase DHX57 isoform X4 [Dama dama].
ACCESSION   XP_061011543
VERSION     XP_061011543.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155560.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1285
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1285
                     /product="putative ATP-dependent RNA helicase DHX57
                     isoform X4"
                     /calculated_mol_wt=145117
     Region          78..115
                     /region_name="UBA_DHX57"
                     /note="UBA domain found in putative ATP-dependent RNA
                     helicase DHX57 and similar proteins; cd14317"
                     /db_xref="CDD:270502"
     Region          139..322
                     /region_name="RWD_DHX57"
                     /note="RWD domain of DEAH box protein 57 (DHX57) and
                     related proteins; cd23825"
                     /db_xref="CDD:467661"
     Region          200..220
                     /region_name="ZnF_C3H1"
                     /note="zinc finger; smart00356"
                     /db_xref="CDD:214632"
     Region          441..>1068
                     /region_name="HrpA"
                     /note="HrpA-like RNA helicase [Translation, ribosomal
                     structure and biogenesis]; COG1643"
                     /db_xref="CDD:441249"
     Region          1112..1209
                     /region_name="OB_NTP_bind"
                     /note="Oligonucleotide/oligosaccharide-binding (OB)-fold;
                     pfam07717"
                     /db_xref="CDD:400182"
     CDS             1..1285
                     /gene="DHX57"
                     /coded_by="XM_061155560.1:333..4190"
                     /db_xref="GeneID:133064985"
ORIGIN      
        1 mtsenqekvk allrdlqeqd adagsergvs geeeddepdy ddeqywspgr easlvpdsdp
       61 lecagsglve phrpeftvsa favhrlsryg fhtehcqaal ricdgdvgas lehlltqcfs
      121 etfgermkis eavahislde cveqrqeeaf alksicgekf ieriqnrvwt igleleylts
      181 kfckfkqkes tkniqeasle vckfylkgnc kfgskckfkh evppnqivgr vernvddshl
      241 nanedasfly eleirfskdh kypyqaplva fystnenlpl acrlhisefl ygkaltfaet
      301 sepvvyslit lleeeseitk lltnthhkys vppvnflpvs pgirlnnpvc rkpvipsnsf
      361 fsnqipevek eseaeeetde degpapvmve desyvnlkkk iskrydwqak svhaenvkic
      421 kqfrikqasr qfqsvlqerq slpaweeren ilkvlskhqv lvisgmtgcg kttqipqfil
      481 ddslngppek vaniictqpr risaisvaer vakeraervg ltvgyqirle svkssatrll
      541 ycttgvllrr legdaalqgv thiivdevhe rteesdflll vlkdivlqrp tlqvilmsat
      601 lnaelfseyf nscpvitipg rtfpvdqffl edaiavtryv lqdgspyars mkqmskeklk
      661 arrsrtafee veedlrlslh lqdqdsvkda vpdqqldfkq llaryqgvsk sviktmsimd
      721 fekvnlelie allewivdgk hsyppgailv flpglaeikm lyeqlqsnsl fnnrrsnrcv
      781 ihplhsslss eeqqavfvkp ptgvtkiiis tniaetsiti ddvvyvidsg kmkekrydas
      841 kgmesledtf vsqanalqrk gragrvasgv cfhlftshhf nhqllkqqlp eiqrvpleql
      901 clrikilemf sthnlqsvfs rliepphtds lraskirlrd lgaltpdetl tplgyhlasl
      961 pvdvrigklm lfgsifrcld paltiaasla fkspfvspwd kkeeanqkkl efafansdyl
     1021 allraykgwq lsmkegmras ynycrqnfls grvlqemasl krqftellsd igfvkeglra
     1081 reiekraqgg gdgildatge eansnaenpk lisamlcaal ypnvvqvksp egkfqktstg
     1141 avrmqpksde lkfvtkndgy vhihpssvny qvrrfdspyl vyhekiktsr vfirdcsmvs
     1201 vyplvlfggg qvnvqlqkge fvvslddgwi rfaaashqva elvkelrcel dqllqdkikn
     1261 psidlctcpr gsriismivk lvttq
//
LOCUS       XP_061011544            1285 aa            linear   MAM 02-DEC-2023
DEFINITION  putative ATP-dependent RNA helicase DHX57 isoform X4 [Dama dama].
ACCESSION   XP_061011544
VERSION     XP_061011544.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155561.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1285
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1285
                     /product="putative ATP-dependent RNA helicase DHX57
                     isoform X4"
                     /calculated_mol_wt=145117
     Region          78..115
                     /region_name="UBA_DHX57"
                     /note="UBA domain found in putative ATP-dependent RNA
                     helicase DHX57 and similar proteins; cd14317"
                     /db_xref="CDD:270502"
     Region          139..322
                     /region_name="RWD_DHX57"
                     /note="RWD domain of DEAH box protein 57 (DHX57) and
                     related proteins; cd23825"
                     /db_xref="CDD:467661"
     Region          200..220
                     /region_name="ZnF_C3H1"
                     /note="zinc finger; smart00356"
                     /db_xref="CDD:214632"
     Region          441..>1068
                     /region_name="HrpA"
                     /note="HrpA-like RNA helicase [Translation, ribosomal
                     structure and biogenesis]; COG1643"
                     /db_xref="CDD:441249"
     Region          1112..1209
                     /region_name="OB_NTP_bind"
                     /note="Oligonucleotide/oligosaccharide-binding (OB)-fold;
                     pfam07717"
                     /db_xref="CDD:400182"
     CDS             1..1285
                     /gene="DHX57"
                     /coded_by="XM_061155561.1:143..4000"
                     /db_xref="GeneID:133064985"
ORIGIN      
        1 mtsenqekvk allrdlqeqd adagsergvs geeeddepdy ddeqywspgr easlvpdsdp
       61 lecagsglve phrpeftvsa favhrlsryg fhtehcqaal ricdgdvgas lehlltqcfs
      121 etfgermkis eavahislde cveqrqeeaf alksicgekf ieriqnrvwt igleleylts
      181 kfckfkqkes tkniqeasle vckfylkgnc kfgskckfkh evppnqivgr vernvddshl
      241 nanedasfly eleirfskdh kypyqaplva fystnenlpl acrlhisefl ygkaltfaet
      301 sepvvyslit lleeeseitk lltnthhkys vppvnflpvs pgirlnnpvc rkpvipsnsf
      361 fsnqipevek eseaeeetde degpapvmve desyvnlkkk iskrydwqak svhaenvkic
      421 kqfrikqasr qfqsvlqerq slpaweeren ilkvlskhqv lvisgmtgcg kttqipqfil
      481 ddslngppek vaniictqpr risaisvaer vakeraervg ltvgyqirle svkssatrll
      541 ycttgvllrr legdaalqgv thiivdevhe rteesdflll vlkdivlqrp tlqvilmsat
      601 lnaelfseyf nscpvitipg rtfpvdqffl edaiavtryv lqdgspyars mkqmskeklk
      661 arrsrtafee veedlrlslh lqdqdsvkda vpdqqldfkq llaryqgvsk sviktmsimd
      721 fekvnlelie allewivdgk hsyppgailv flpglaeikm lyeqlqsnsl fnnrrsnrcv
      781 ihplhsslss eeqqavfvkp ptgvtkiiis tniaetsiti ddvvyvidsg kmkekrydas
      841 kgmesledtf vsqanalqrk gragrvasgv cfhlftshhf nhqllkqqlp eiqrvpleql
      901 clrikilemf sthnlqsvfs rliepphtds lraskirlrd lgaltpdetl tplgyhlasl
      961 pvdvrigklm lfgsifrcld paltiaasla fkspfvspwd kkeeanqkkl efafansdyl
     1021 allraykgwq lsmkegmras ynycrqnfls grvlqemasl krqftellsd igfvkeglra
     1081 reiekraqgg gdgildatge eansnaenpk lisamlcaal ypnvvqvksp egkfqktstg
     1141 avrmqpksde lkfvtkndgy vhihpssvny qvrrfdspyl vyhekiktsr vfirdcsmvs
     1201 vyplvlfggg qvnvqlqkge fvvslddgwi rfaaashqva elvkelrcel dqllqdkikn
     1261 psidlctcpr gsriismivk lvttq
//
LOCUS       XP_061011545             587 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 39B-like [Dama dama].
ACCESSION   XP_061011545
VERSION     XP_061011545.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155562.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..587
                     /product="tetratricopeptide repeat protein 39B-like"
                     /calculated_mol_wt=67813
     Region          51..489
                     /region_name="Iml2-TPR_39"
                     /note="Iml2/Tetratricopeptide repeat protein 39;
                     pfam10300"
                     /db_xref="CDD:463047"
     Region          505..>580
                     /region_name="CpoB"
                     /note="Cell division protein CpoB, coordinates
                     peptidoglycan biosynthesis and outer membrane constriction
                     [Cell cycle control, cell division, chromosome
                     partitioning]; COG1729"
                     /db_xref="CDD:441335"
     CDS             1..587
                     /gene="LOC133064987"
                     /coded_by="XM_061155562.1:422..2185"
                     /db_xref="GeneID:133064987"
ORIGIN      
        1 msltlnkrdd meheftsfsk gedkedkfed ayeiipaaat mdlvssleec ttglylflnn
       61 rfsdaihlly pwsknsiyha liysilmvvk afltfdpqdi eigmtatkda lrvcnnfrrk
      121 srvlsfsrlv skqgikaike eelhaevcya eclmlkstvt fiqddsmfsf lksginigls
      181 yqiykdcqqv ltqipdyqsk tyrhlvggik fglgvlnlll slvpprtlki lnvvgysgdr
      241 evgltllhes aseshinnif svlvllfnyn ylsiafgvek nhssavenlf liylqkfpnc
      301 vilkffharf smlkgyfkha qltleecifi qnewkqvqhl cywelmwchi fllewkqayh
      361 yahvlfqnsr wsksiysfak asllavlppd faksvsedms slflsvdslr irilgtsvpi
      421 ekfvaekgqr yattagwfta qpilefmyaw sgfrviskkl elistwlsii dkgeellqea
      481 pnkeyviddi sllnllkglc lkylgkysma eyyfshviqm ekllkydhyl vpysyyelgi
      541 lyylkgdyas atktlenikn ykdysmearl qfrahvaleq iakekvi
//
LOCUS       XP_061011546             587 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 39B-like [Dama dama].
ACCESSION   XP_061011546
VERSION     XP_061011546.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155563.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..587
                     /product="tetratricopeptide repeat protein 39B-like"
                     /calculated_mol_wt=67813
     Region          51..489
                     /region_name="Iml2-TPR_39"
                     /note="Iml2/Tetratricopeptide repeat protein 39;
                     pfam10300"
                     /db_xref="CDD:463047"
     Region          505..>580
                     /region_name="CpoB"
                     /note="Cell division protein CpoB, coordinates
                     peptidoglycan biosynthesis and outer membrane constriction
                     [Cell cycle control, cell division, chromosome
                     partitioning]; COG1729"
                     /db_xref="CDD:441335"
     CDS             1..587
                     /gene="LOC133064987"
                     /coded_by="XM_061155563.1:402..2165"
                     /db_xref="GeneID:133064987"
ORIGIN      
        1 msltlnkrdd meheftsfsk gedkedkfed ayeiipaaat mdlvssleec ttglylflnn
       61 rfsdaihlly pwsknsiyha liysilmvvk afltfdpqdi eigmtatkda lrvcnnfrrk
      121 srvlsfsrlv skqgikaike eelhaevcya eclmlkstvt fiqddsmfsf lksginigls
      181 yqiykdcqqv ltqipdyqsk tyrhlvggik fglgvlnlll slvpprtlki lnvvgysgdr
      241 evgltllhes aseshinnif svlvllfnyn ylsiafgvek nhssavenlf liylqkfpnc
      301 vilkffharf smlkgyfkha qltleecifi qnewkqvqhl cywelmwchi fllewkqayh
      361 yahvlfqnsr wsksiysfak asllavlppd faksvsedms slflsvdslr irilgtsvpi
      421 ekfvaekgqr yattagwfta qpilefmyaw sgfrviskkl elistwlsii dkgeellqea
      481 pnkeyviddi sllnllkglc lkylgkysma eyyfshviqm ekllkydhyl vpysyyelgi
      541 lyylkgdyas atktlenikn ykdysmearl qfrahvaleq iakekvi
//
LOCUS       XP_061011547             587 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 39B-like [Dama dama].
ACCESSION   XP_061011547
VERSION     XP_061011547.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155564.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..587
                     /product="tetratricopeptide repeat protein 39B-like"
                     /calculated_mol_wt=67813
     Region          51..489
                     /region_name="Iml2-TPR_39"
                     /note="Iml2/Tetratricopeptide repeat protein 39;
                     pfam10300"
                     /db_xref="CDD:463047"
     Region          505..>580
                     /region_name="CpoB"
                     /note="Cell division protein CpoB, coordinates
                     peptidoglycan biosynthesis and outer membrane constriction
                     [Cell cycle control, cell division, chromosome
                     partitioning]; COG1729"
                     /db_xref="CDD:441335"
     CDS             1..587
                     /gene="LOC133064987"
                     /coded_by="XM_061155564.1:444..2207"
                     /db_xref="GeneID:133064987"
ORIGIN      
        1 msltlnkrdd meheftsfsk gedkedkfed ayeiipaaat mdlvssleec ttglylflnn
       61 rfsdaihlly pwsknsiyha liysilmvvk afltfdpqdi eigmtatkda lrvcnnfrrk
      121 srvlsfsrlv skqgikaike eelhaevcya eclmlkstvt fiqddsmfsf lksginigls
      181 yqiykdcqqv ltqipdyqsk tyrhlvggik fglgvlnlll slvpprtlki lnvvgysgdr
      241 evgltllhes aseshinnif svlvllfnyn ylsiafgvek nhssavenlf liylqkfpnc
      301 vilkffharf smlkgyfkha qltleecifi qnewkqvqhl cywelmwchi fllewkqayh
      361 yahvlfqnsr wsksiysfak asllavlppd faksvsedms slflsvdslr irilgtsvpi
      421 ekfvaekgqr yattagwfta qpilefmyaw sgfrviskkl elistwlsii dkgeellqea
      481 pnkeyviddi sllnllkglc lkylgkysma eyyfshviqm ekllkydhyl vpysyyelgi
      541 lyylkgdyas atktlenikn ykdysmearl qfrahvaleq iakekvi
//
LOCUS       XP_061011548             238 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/arginine-rich splicing factor 7 isoform X1 [Dama dama].
ACCESSION   XP_061011548
VERSION     XP_061011548.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155565.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..238
                     /product="serine/arginine-rich splicing factor 7 isoform
                     X1"
                     /calculated_mol_wt=27248
     Region          12..88
                     /region_name="RRM_SRSF7"
                     /note="RNA recognition motif (RRM) found in vertebrate
                     serine/arginine-rich splicing factor 7 (SRSF7); cd12646"
                     /db_xref="CDD:410050"
     Site            order(41,43..45,49,51,82,84)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410050"
     Region          104..119
                     /region_name="zf-CCHC"
                     /note="Zinc knuckle; pfam00098"
                     /db_xref="CDD:395050"
     CDS             1..238
                     /gene="SRSF7"
                     /coded_by="XM_061155565.1:123..839"
                     /db_xref="GeneID:133064988"
ORIGIN      
        1 msrygrygge tkvyvgnlgt gagkgelera fsyygplrtv wiarnppgfa fvefedprda
       61 edavrgldgk vicgsrvrve lstgmprrsr fdrpparrpf dpndrcyecg ekghyaydch
      121 rysrrrrsrs rsrshsrsrg rrysrsrsrs rgrrsrsasp rrsrsvslrr srsaslrrsr
      181 sgsikgsryf qsrsrsrsrs rslsrprssr sksrspspkr srspsgsprr saspervd
//
LOCUS       XP_061011549             235 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/arginine-rich splicing factor 7 isoform X2 [Dama dama].
ACCESSION   XP_061011549
VERSION     XP_061011549.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155566.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..235
                     /product="serine/arginine-rich splicing factor 7 isoform
                     X2"
                     /calculated_mol_wt=26810
     Region          12..88
                     /region_name="RRM_SRSF7"
                     /note="RNA recognition motif (RRM) found in vertebrate
                     serine/arginine-rich splicing factor 7 (SRSF7); cd12646"
                     /db_xref="CDD:410050"
     Site            order(41,43..45,49,51,82,84)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410050"
     CDS             1..235
                     /gene="SRSF7"
                     /coded_by="XM_061155566.1:123..830"
                     /db_xref="GeneID:133064988"
ORIGIN      
        1 msrygrygge tkvyvgnlgt gagkgelera fsyygplrtv wiarnppgfa fvefedprda
       61 edavrgldgk vicgsrvrve lstgmprrsr fdrpparrpf dpndrcyecg ekghyaydch
      121 rysrrrrsrs rsrshsrsrg rrysrsrsrs rgrrsrsasp rrsrsvslrr srsaslrrsr
      181 sgsikgsrsr srsrsrsrsl srprssrsks rspspkrsrs psgsprrsas pervd
//
LOCUS       XP_061011550             227 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/arginine-rich splicing factor 7 isoform X3 [Dama dama].
ACCESSION   XP_061011550
VERSION     XP_061011550.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155567.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..227
                     /product="serine/arginine-rich splicing factor 7 isoform
                     X3"
                     /calculated_mol_wt=26037
     Region          12..88
                     /region_name="RRM_SRSF7"
                     /note="RNA recognition motif (RRM) found in vertebrate
                     serine/arginine-rich splicing factor 7 (SRSF7); cd12646"
                     /db_xref="CDD:410050"
     Site            order(41,43..45,49,51,82,84)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410050"
     Region          104..119
                     /region_name="zf-CCHC"
                     /note="Zinc knuckle; pfam00098"
                     /db_xref="CDD:395050"
     CDS             1..227
                     /gene="SRSF7"
                     /coded_by="XM_061155567.1:123..806"
                     /db_xref="GeneID:133064988"
ORIGIN      
        1 msrygrygge tkvyvgnlgt gagkgelera fsyygplrtv wiarnppgfa fvefedprda
       61 edavrgldgk vicgsrvrve lstgmprrsr fdrpparrpf dpndrcyecg ekghyaydch
      121 rysrrrrsrs rsrshsrsrg rrysrsrsrs rgrrsrsasp rrsrsvslrr srsaslrrsr
      181 srsrsrsrsr slsrprssrs ksrspspkrs rspsgsprrs aspervd
//
LOCUS       XP_061011551             166 aa            linear   MAM 02-DEC-2023
DEFINITION  gem-associated protein 6 [Dama dama].
ACCESSION   XP_061011551
VERSION     XP_061011551.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155568.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..166
                     /product="gem-associated protein 6"
                     /calculated_mol_wt=18561
     Region          1..85
                     /region_name="Gemin6"
                     /note="Gemin6 Sm-like domain; pfam06372"
                     /db_xref="CDD:461887"
     Region          87..166
                     /region_name="Gemin6_C"
                     /note="Gemin6 C-terminal domain; pfam20417"
                     /db_xref="CDD:466566"
     CDS             1..166
                     /gene="GEMIN6"
                     /coded_by="XM_061155568.1:354..854"
                     /db_xref="GeneID:133064989"
ORIGIN      
        1 mnewmkkgpl ewqdytykav svtasdkeyk gwvlttdpvs anivlvnfle dgsisvtgim
       61 ghavqtvevv negdhsvrek lmhlfmsgdc kayspedlek rknslkkwle knhipiteqr
      121 dsrktlcvag vltidppygp encnssneii lsrvqdliqg hleasq
//
LOCUS       XP_061011552             342 aa            linear   MAM 02-DEC-2023
DEFINITION  galactose mutarotase [Dama dama].
ACCESSION   XP_061011552
VERSION     XP_061011552.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155569.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..342
                     /product="galactose mutarotase"
                     /calculated_mol_wt=37557
     Region          21..339
                     /region_name="galactose_mutarotase_like"
                     /note="galactose mutarotase_like; cd09019"
                     /db_xref="CDD:185696"
     Site            order(71,82,107,176,178,243,281,307)
                     /site_type="active"
                     /db_xref="CDD:185696"
     Site            order(176,307)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:185696"
     CDS             1..342
                     /gene="GALM"
                     /coded_by="XM_061155569.1:254..1282"
                     /db_xref="GeneID:133064990"
ORIGIN      
        1 mvsvtravfg dlplgagtve kfqlqsdqlr vdiiswgcti talevkdrqg rasdvvlgfd
       61 elegylqkqp yfgavvgrva nriakgtftl dgkeyklain ngpnslhggv kgfdkvlwtp
      121 rvlsngvefs rvspdgeegy pgdlkvwvmy tldgselvvn yraqasqttp vnltnhsyfn
      181 lagqgspniy dhevtieada flpvdevlip tgeiasvqgt afdlrkpvel gkhlqefhvn
      241 gfdhnfclkg skekrfcarv yhagsgrvle vyttqpgvqf ytgnfldgtl kgksgavypk
      301 hsgfcletqs wpdavnqphf spvllkpgee ydhttwfkfs va
//
LOCUS       XP_061011553             541 aa            linear   MAM 02-DEC-2023
DEFINITION  heterogeneous nuclear ribonucleoprotein L-like isoform X1 [Dama
            dama].
ACCESSION   XP_061011553
VERSION     XP_061011553.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155570.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..541
                     /product="heterogeneous nuclear ribonucleoprotein L-like
                     isoform X1"
                     /calculated_mol_wt=59881
     Region          73..540
                     /region_name="hnRNP-L_PTB"
                     /note="hnRNP-L/PTB/hephaestus splicing factor family;
                     TIGR01649"
                     /db_xref="CDD:273733"
     CDS             1..541
                     /gene="HNRNPLL"
                     /coded_by="XM_061155570.1:382..2007"
                     /db_xref="GeneID:133064992"
ORIGIN      
        1 msssssspre tyeedrdyes qakrlkteeg eidysaeege nrreatprgg gdggggrsfs
       61 qpeaggshhk vsvspvvhvr glcesvvead lvealekfgt icyvmmmpfk rqalvefeni
      121 dsakecvtfa adepvyiagq qaffnystsk ritrpgntdd psggnkvlll siqnplypit
      181 vdvlytvcnp vgkvqrivif krngiqamve fesvlcaqka kaalngadiy agcctlkiey
      241 arptrlnvir ndndswdytk pylgrrdrgk grqrqailge hpssfrhdgy gshgpllplp
      301 sryrmgsrdt pelvayplpq asssymhggn psgsvvmvsg lhqlkmncsr vfnlfclygn
      361 iekvkfmkti pgtalvemgd eyaveravth lnnvklfgkr lnvcvskqhs vvpsqifele
      421 dgtssykdfa msknnrftsa gqaskniiqp pscvlhyynv plcvteetft klcndhevlt
      481 fikykvfdak psaktlsgll ewecktdave altalnhyqi rvpngsnpyt lklcfstssh
      541 l
//
LOCUS       XP_061011554             535 aa            linear   MAM 02-DEC-2023
DEFINITION  heterogeneous nuclear ribonucleoprotein L-like isoform X2 [Dama
            dama].
ACCESSION   XP_061011554
VERSION     XP_061011554.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155571.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..535
                     /product="heterogeneous nuclear ribonucleoprotein L-like
                     isoform X2"
                     /calculated_mol_wt=59271
     Region          73..523
                     /region_name="hnRNP-L_PTB"
                     /note="hnRNP-L/PTB/hephaestus splicing factor family;
                     TIGR01649"
                     /db_xref="CDD:273733"
     CDS             1..535
                     /gene="HNRNPLL"
                     /coded_by="XM_061155571.1:385..1992"
                     /db_xref="GeneID:133064992"
ORIGIN      
        1 msssssspre tyeedrdyes qakrlkteeg eidysaeege nrreatprgg gdggggrsfs
       61 qpeaggshhk vsvspvvhvr glcesvvead lvealekfgt icyvmmmpfk rqalvefeni
      121 dsakecvtfa adepvyiagq qaffnystsk ritrpgntdd psggnkvlll siqnplypit
      181 vdvlytvcnp vgkvqrivif krngiqamve fesvlcaqka kaalngadiy agcctlkiey
      241 arptrlnvir ndndswdytk pylgrrdrgk grqrqailge hpssfrhdgy gshgpllplp
      301 sryrmgsrdt pelvayplpq asssymhggn psgsvvmvsg lhqlkmncsr vfnlfclygn
      361 iekvkfmkti pgtalvemgd eyaveravth lnnvklfgkr lnvcvskqhs vvpsqifele
      421 dgtssykdfa msknnrftsa gqaskniiqp pscvlhyynv plcvteetft klcndhevlt
      481 fikykvfdak psaktlsgll ewecktdave altalnhyqi rvpideelsl lvlks
//
LOCUS       XP_061011555             517 aa            linear   MAM 02-DEC-2023
DEFINITION  heterogeneous nuclear ribonucleoprotein L-like isoform X3 [Dama
            dama].
ACCESSION   XP_061011555
VERSION     XP_061011555.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155572.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..517
                     /product="heterogeneous nuclear ribonucleoprotein L-like
                     isoform X3"
                     /calculated_mol_wt=57131
     Region          73..516
                     /region_name="hnRNP-L_PTB"
                     /note="hnRNP-L/PTB/hephaestus splicing factor family;
                     TIGR01649"
                     /db_xref="CDD:273733"
     CDS             1..517
                     /gene="HNRNPLL"
                     /coded_by="XM_061155572.1:385..1938"
                     /db_xref="GeneID:133064992"
ORIGIN      
        1 msssssspre tyeedrdyes qakrlkteeg eidysaeege nrreatprgg gdggggrsfs
       61 qpeaggshhk vsvspvvhvr glcesvvead lvealekfgt icyvmmmpfk rqalvefeni
      121 dsakecvtfa adepvyiagq qaffnystsk ritrpgntdd psggnkvlll siqnplypit
      181 vdvlytvcnp vgkvqrivif krngiqamve fesvlcaqka kaalngadiy agcctlkiey
      241 arptrlnvir ndndswdytk pylgrrgshg pllplpsryr mgsrdtpelv ayplpqasss
      301 ymhggnpsgs vvmvsglhql kmncsrvfnl fclygniekv kfmktipgta lvemgdeyav
      361 eravthlnnv klfgkrlnvc vskqhsvvps qifeledgts sykdfamskn nrftsagqas
      421 kniiqppscv lhyynvplcv teetftklcn dhevltfiky kvfdakpsak tlsgllewec
      481 ktdavealta lnhyqirvpn gsnpytlklc fstsshl
//
LOCUS       XP_061011556             174 aa            linear   MAM 02-DEC-2023
DEFINITION  male-enhanced antigen 1-like [Dama dama].
ACCESSION   XP_061011556
VERSION     XP_061011556.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155573.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..174
                     /product="male-enhanced antigen 1-like"
                     /calculated_mol_wt=18648
     Region          54..170
                     /region_name="MEA1"
                     /note="Male enhanced antigen 1 (MEA1); pfam06910"
                     /db_xref="CDD:429188"
     CDS             1..174
                     /gene="LOC133064993"
                     /coded_by="XM_061155573.1:48..572"
                     /db_xref="GeneID:133064993"
ORIGIN      
        1 maavvlggdt mgpkrifpnq teelgphqgp tegtgdwsse epeeeqeetg agpagysyqp
       61 lnqdpeqeev elapvgdged vvadiqdriq alelhlpdpp lesededeqg atalnshssi
      121 pmdpehvelv krtmagislp apgvpaware isdaqwedvv qkalqarqaa pawk
//
LOCUS       XP_061011557             539 aa            linear   MAM 02-DEC-2023
DEFINITION  cytochrome P450 1B1 [Dama dama].
ACCESSION   XP_061011557
VERSION     XP_061011557.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155574.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..539
                     /product="cytochrome P450 1B1"
                     /calculated_mol_wt=60126
     Region          81..514
                     /region_name="CYP1B1-like"
                     /note="cytochrome P450 family 1, subfamily B, polypeptide
                     1 and similar cytochrome P450s; cd20675"
                     /db_xref="CDD:410768"
     Site            order(117,132..133,141,145,152,323,326..327,330..331,
                     390..391,394..395,397,420,458..460,464,466..468,472)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410768"
     Site            order(126..127,131,133..134,228,231,264..265,268,322,
                     325..326,329..330,391,395,505..506)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410768"
     CDS             1..539
                     /gene="LOC133064994"
                     /coded_by="XM_061155574.1:399..2018"
                     /db_xref="GeneID:133064994"
ORIGIN      
        1 matglspddh lsptllsaqq tmlllllsvl aavhvgqwlf rqrrrqpgsa ppgpfawpli
       61 gnaasmgsap hllfarlarr ygdvfqirlg scrvvvlnge rairqalvhq saafadrppf
      121 psfrvvsggr slafgqyses wkaqrraahs tmrafstrqp rgrrvleghv vgearelvel
      181 lvrrsaggaf ldprpltlva vanvmsavcf gcryshddae frellshnee fgrtvgagsl
      241 vdvlpwlqrf pnpvrtafre feqinrnfsn fvldkflrhr eslrpgaapr dmmdafihss
      301 gadsgdggpr ldvdyvpatv tdifgasqdt lstalqwllv lftrysevqs riqaeldqvv
      361 grhrlptled qphlpyvmaf lyeamrfssf vpvtiphatt asasvlgyhi pkdtvvfvnq
      421 wsvnhdpvkw snpedfdptr fldkdglink dlagsvmifs vgkrrcigee iskmqlflfi
      481 silahqcnfr anpdepskvd fnygltikpk sfkinvtlre smelldsavq klqaekecq
//
LOCUS       XP_061011558             583 aa            linear   MAM 02-DEC-2023
DEFINITION  atlastin-2 isoform X1 [Dama dama].
ACCESSION   XP_061011558
VERSION     XP_061011558.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155575.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..583
                     /product="atlastin-2 isoform X1"
                     /calculated_mol_wt=66227
     Region          70..341
                     /region_name="GBP"
                     /note="Guanylate-binding protein, N-terminal domain;
                     pfam02263"
                     /db_xref="CDD:460516"
     CDS             1..583
                     /gene="ATL2"
                     /coded_by="XM_061155575.1:42..1793"
                     /db_xref="GeneID:133064995"
ORIGIN      
        1 maegdevtrs qephqglrrr rrtsdpntgv nhvssttllg enyedddlvn sdevmkkpcp
       61 vqivlahedd hnfeldeeal eqillqehir dlnivvvsva gafrkgksfl ldfmlrymyn
      121 kdsqswiggn nepltgftwr ggcerettgi qvwnevfvie rpngtkvavl lmdtqgafds
      181 qstikdcatv falstmtssv qvynlsqniq eddlqhlqlf teygrlamee iyqkpfqtlm
      241 flirdwsypy ehsygleggk qflekrlqvk qnqheelqnv rkhihncfsn lgcfllphpg
      301 lkvatnpsfd grlkdideef krelrnlvpl llapenlvek eisgskvtcr dlveyfkayi
      361 kiyqgeelph pksmlqatae annlaavaga reiycksmeq vcggdkpyia psdlerkhld
      421 lkevaikqfr svkkmggdef crryqdqlea eieetyanfi khndgknify aartpatlfa
      481 vmfamyiisg ltgfvglnsi avlcnlvmgl altslctway vkysgefrei gtmidqiaet
      541 lweqvlkplg dnlmeenirq svtnsikagl tdqvshharl ktd
//
LOCUS       XP_061011559             564 aa            linear   MAM 02-DEC-2023
DEFINITION  atlastin-2 isoform X2 [Dama dama].
ACCESSION   XP_061011559
VERSION     XP_061011559.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155576.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..564
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..564
                     /product="atlastin-2 isoform X2"
                     /calculated_mol_wt=63809
     Region          51..322
                     /region_name="GBP"
                     /note="Guanylate-binding protein, N-terminal domain;
                     pfam02263"
                     /db_xref="CDD:460516"
     CDS             1..564
                     /gene="ATL2"
                     /coded_by="XM_061155576.1:129..1823"
                     /db_xref="GeneID:133064995"
ORIGIN      
        1 mgpaveedaq raggadtslp genyedddlv nsdevmkkpc pvqivlahed dhnfeldeea
       61 leqillqehi rdlnivvvsv agafrkgksf lldfmlrymy nkdsqswigg nnepltgftw
      121 rggcerettg iqvwnevfvi erpngtkvav llmdtqgafd sqstikdcat vfalstmtss
      181 vqvynlsqni qeddlqhlql fteygrlame eiyqkpfqtl mflirdwsyp yehsyglegg
      241 kqflekrlqv kqnqheelqn vrkhihncfs nlgcfllphp glkvatnpsf dgrlkdidee
      301 fkrelrnlvp lllapenlve keisgskvtc rdlveyfkay ikiyqgeelp hpksmlqata
      361 eannlaavag areiycksme qvcggdkpyi apsdlerkhl dlkevaikqf rsvkkmggde
      421 fcrryqdqle aeieetyanf ikhndgknif yaartpatlf avmfamyiis gltgfvglns
      481 iavlcnlvmg laltslctwa yvkysgefre igtmidqiae tlweqvlkpl gdnlmeenir
      541 qsvtnsikag ltdqvshhar lktd
//
LOCUS       XP_061011560             412 aa            linear   MAM 02-DEC-2023
DEFINITION  atlastin-2 isoform X3 [Dama dama].
ACCESSION   XP_061011560
VERSION     XP_061011560.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155577.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..412
                     /product="atlastin-2 isoform X3"
                     /calculated_mol_wt=46773
     Region          <1..170
                     /region_name="GBP"
                     /note="Guanylate-binding protein, N-terminal domain;
                     pfam02263"
                     /db_xref="CDD:460516"
     CDS             1..412
                     /gene="ATL2"
                     /coded_by="XM_061155577.1:287..1525"
                     /db_xref="GeneID:133064995"
ORIGIN      
        1 mdtqgafdsq stikdcatvf alstmtssvq vynlsqniqe ddlqhlqlft eygrlameei
       61 yqkpfqtlmf lirdwsypye hsygleggkq flekrlqvkq nqheelqnvr khihncfsnl
      121 gcfllphpgl kvatnpsfdg rlkdideefk relrnlvpll lapenlveke isgskvtcrd
      181 lveyfkayik iyqgeelphp ksmlqataea nnlaavagar eiycksmeqv cggdkpyiap
      241 sdlerkhldl kevaikqfrs vkkmggdefc rryqdqleae ieetyanfik hndgknifya
      301 artpatlfav mfamyiisgl tgfvglnsia vlcnlvmgla ltslctwayv kysgefreig
      361 tmidqiaetl weqvlkplgd nlmeenirqs vtnsikaglt dqvshharlk td
//
LOCUS       XP_061011561             584 aa            linear   MAM 02-DEC-2023
DEFINITION  atlastin-2 isoform X4 [Dama dama].
ACCESSION   XP_061011561
VERSION     XP_061011561.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155578.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..584
                     /product="atlastin-2 isoform X4"
                     /calculated_mol_wt=66737
     Region          70..341
                     /region_name="GBP"
                     /note="Guanylate-binding protein, N-terminal domain;
                     pfam02263"
                     /db_xref="CDD:460516"
     CDS             1..584
                     /gene="ATL2"
                     /coded_by="XM_061155578.1:42..1796"
                     /db_xref="GeneID:133064995"
ORIGIN      
        1 maegdevtrs qephqglrrr rrtsdpntgv nhvssttllg enyedddlvn sdevmkkpcp
       61 vqivlahedd hnfeldeeal eqillqehir dlnivvvsva gafrkgksfl ldfmlrymyn
      121 kdsqswiggn nepltgftwr ggcerettgi qvwnevfvie rpngtkvavl lmdtqgafds
      181 qstikdcatv falstmtssv qvynlsqniq eddlqhlqlf teygrlamee iyqkpfqtlm
      241 flirdwsypy ehsygleggk qflekrlqvk qnqheelqnv rkhihncfsn lgcfllphpg
      301 lkvatnpsfd grlkdideef krelrnlvpl llapenlvek eisgskvtcr dlveyfkayi
      361 kiyqgeelph pksmlqatae annlaavaga reiycksmeq vcggdkpyia psdlerkhld
      421 lkevaikqfr svkkmggdef crryqdqlea eieetyanfi khndgknify aartpatlfa
      481 vmfamyiisg ltgfvglnsi avlcnlvmgl altslctway vkysgefrei gtmidqiaet
      541 lweqrsprkv fsklfevtrr rmvhrvlssa qrqrlssnnn kkkn
//
LOCUS       XP_061011562             412 aa            linear   MAM 02-DEC-2023
DEFINITION  regulator of microtubule dynamics protein 2 isoform X1 [Dama dama].
ACCESSION   XP_061011562
VERSION     XP_061011562.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155579.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..412
                     /product="regulator of microtubule dynamics protein 2
                     isoform X1"
                     /calculated_mol_wt=47197
     Region          302..352
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          357..385
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..412
                     /gene="RMDN2"
                     /coded_by="XM_061155579.1:307..1545"
                     /db_xref="GeneID:133064997"
ORIGIN      
        1 mphsinremi lgivvgtagi sllllwyhkv rkprtavdlp kflslgnsld lmtlqdemps
       61 gqgttaifqg rqlqilekln elltnmeelk eeirvlkeai pkleeyiqge lggkvtvhki
      121 spqhrarkrr latvqssats nsseeaeseg gyvtantdte eqsfpvpkaf nthveelnld
      181 aliqmadnlr vnesrkvesf ellcdhkekf rdeiefiwrf araygdmyel stntqekkhy
      241 anigktlgek aitrapkngy chlwyavlcg yvsefeglqn kinygyrfke hldkaieflp
      301 eepflyylkg rycyavskls wierkmaatl fgnipsstvq ealqnflkve elqpafsksn
      361 ymfmakcyad lnqiddavkf cnlavllpci tkelehlevh dsriieawle ef
//
LOCUS       XP_061011563             410 aa            linear   MAM 02-DEC-2023
DEFINITION  regulator of microtubule dynamics protein 2 isoform X2 [Dama dama].
ACCESSION   XP_061011563
VERSION     XP_061011563.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155580.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..410
                     /product="regulator of microtubule dynamics protein 2
                     isoform X2"
                     /calculated_mol_wt=46806
     Region          302..352
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          357..385
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..410
                     /gene="RMDN2"
                     /coded_by="XM_061155580.1:305..1537"
                     /db_xref="GeneID:133064997"
ORIGIN      
        1 mphsinremi lgivvgtagi sllllwyhkv rkprtavdlp kflslgnsld lmtlqdemps
       61 gqgttaifqg rqlqilekln elltnmeelk eeirvlkeai pkleeyiqge lggkvtvhki
      121 spqhrarkrr latvqssats nsseeaeseg gyvtantdte eqsfpvpkaf nthveelnld
      181 aliqmadnlr vnesrkvesf ellcdhkekf rdeiefiwrf araygdmyel stntqekkhy
      241 anigktlgek aitrapkngy chlwyavlcg yvsefeglqn kinygyrfke hldkaieflp
      301 eepflyylkg rycyavskls wierkmaatl fgnipsstvq ealqnflkve elqpafsksn
      361 ymfmakcyad lnqiddavkf cnlavllpci tkedkdaqke vkkistslkr
//
LOCUS       XP_061011564             254 aa            linear   MAM 02-DEC-2023
DEFINITION  cdc42 effector protein 3 [Dama dama].
ACCESSION   XP_061011564
VERSION     XP_061011564.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155581.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..254
                     /product="cdc42 effector protein 3"
                     /calculated_mol_wt=27528
     Region          30..86
                     /region_name="PBD"
                     /note="P21-Rho-binding domain; pfam00786"
                     /db_xref="CDD:395634"
     Region          102..253
                     /region_name="BORG_CEP"
                     /note="Cdc42 effector; pfam14957"
                     /db_xref="CDD:464403"
     CDS             1..254
                     /gene="CDC42EP3"
                     /coded_by="XM_061155581.1:530..1294"
                     /db_xref="GeneID:133064998"
ORIGIN      
        1 mpaktpiylk aannkkgkkf klrdilspdm ispplgdfrh tihigkegqh dvfgdisflq
       61 gnyellpgnq ekahmgqfpg hneffranst sdsmftetps pvlknaislp tiggsqalml
      121 pllspvtfss kqesfgpgkv prlscepvme ekapekssvl enrtahqgdv swgssgsasq
      181 ssqgrdshss slseqypdwa aedmldppap celvkektks eeslsdltgs llslqldlgp
      241 sfldevlnvm dknk
//
LOCUS       XP_061011565             254 aa            linear   MAM 02-DEC-2023
DEFINITION  cdc42 effector protein 3 [Dama dama].
ACCESSION   XP_061011565
VERSION     XP_061011565.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155582.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..254
                     /product="cdc42 effector protein 3"
                     /calculated_mol_wt=27528
     Region          30..86
                     /region_name="PBD"
                     /note="P21-Rho-binding domain; pfam00786"
                     /db_xref="CDD:395634"
     Region          102..253
                     /region_name="BORG_CEP"
                     /note="Cdc42 effector; pfam14957"
                     /db_xref="CDD:464403"
     CDS             1..254
                     /gene="CDC42EP3"
                     /coded_by="XM_061155582.1:613..1377"
                     /db_xref="GeneID:133064998"
ORIGIN      
        1 mpaktpiylk aannkkgkkf klrdilspdm ispplgdfrh tihigkegqh dvfgdisflq
       61 gnyellpgnq ekahmgqfpg hneffranst sdsmftetps pvlknaislp tiggsqalml
      121 pllspvtfss kqesfgpgkv prlscepvme ekapekssvl enrtahqgdv swgssgsasq
      181 ssqgrdshss slseqypdwa aedmldppap celvkektks eeslsdltgs llslqldlgp
      241 sfldevlnvm dknk
//
LOCUS       XP_061011566             254 aa            linear   MAM 02-DEC-2023
DEFINITION  cdc42 effector protein 3 [Dama dama].
ACCESSION   XP_061011566
VERSION     XP_061011566.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155583.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..254
                     /product="cdc42 effector protein 3"
                     /calculated_mol_wt=27528
     Region          30..86
                     /region_name="PBD"
                     /note="P21-Rho-binding domain; pfam00786"
                     /db_xref="CDD:395634"
     Region          102..253
                     /region_name="BORG_CEP"
                     /note="Cdc42 effector; pfam14957"
                     /db_xref="CDD:464403"
     CDS             1..254
                     /gene="CDC42EP3"
                     /coded_by="XM_061155583.1:453..1217"
                     /db_xref="GeneID:133064998"
ORIGIN      
        1 mpaktpiylk aannkkgkkf klrdilspdm ispplgdfrh tihigkegqh dvfgdisflq
       61 gnyellpgnq ekahmgqfpg hneffranst sdsmftetps pvlknaislp tiggsqalml
      121 pllspvtfss kqesfgpgkv prlscepvme ekapekssvl enrtahqgdv swgssgsasq
      181 ssqgrdshss slseqypdwa aedmldppap celvkektks eeslsdltgs llslqldlgp
      241 sfldevlnvm dknk
//
LOCUS       XP_061011567             254 aa            linear   MAM 02-DEC-2023
DEFINITION  cdc42 effector protein 3 [Dama dama].
ACCESSION   XP_061011567
VERSION     XP_061011567.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155584.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..254
                     /product="cdc42 effector protein 3"
                     /calculated_mol_wt=27528
     Region          30..86
                     /region_name="PBD"
                     /note="P21-Rho-binding domain; pfam00786"
                     /db_xref="CDD:395634"
     Region          102..253
                     /region_name="BORG_CEP"
                     /note="Cdc42 effector; pfam14957"
                     /db_xref="CDD:464403"
     CDS             1..254
                     /gene="CDC42EP3"
                     /coded_by="XM_061155584.1:449..1213"
                     /db_xref="GeneID:133064998"
ORIGIN      
        1 mpaktpiylk aannkkgkkf klrdilspdm ispplgdfrh tihigkegqh dvfgdisflq
       61 gnyellpgnq ekahmgqfpg hneffranst sdsmftetps pvlknaislp tiggsqalml
      121 pllspvtfss kqesfgpgkv prlscepvme ekapekssvl enrtahqgdv swgssgsasq
      181 ssqgrdshss slseqypdwa aedmldppap celvkektks eeslsdltgs llslqldlgp
      241 sfldevlnvm dknk
//
LOCUS       XP_061011568             303 aa            linear   MAM 02-DEC-2023
DEFINITION  sulfotransferase 6B1 [Dama dama].
ACCESSION   XP_061011568
VERSION     XP_061011568.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155585.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..303
                     /product="sulfotransferase 6B1"
                     /calculated_mol_wt=34828
     Region          56..289
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; pfam00685"
                     /db_xref="CDD:425820"
     CDS             1..303
                     /gene="SULT6B1"
                     /coded_by="XM_061155585.1:666..1577"
                     /db_xref="GeneID:133064999"
ORIGIN      
        1 mtanskfidy idealekske tvlshlffty qgipypvtmc tsetfkalda fearsddivl
       61 asypkcgsnw ilhiiselmf adskqkyeyp efpvlecgdp ekyqrmkqfp sprilathlh
      121 ydklpgsifk nkakilvifr npkdtavsff hfhndvpdip sygswddffr qfmkgqvswg
      181 syfdfainwn khlddenvmf ilyedlrenl atgikriaef lgfspsgeqi qtisaqstfp
      241 amraksqeth gavgpflfrk gevgdwkslf setqnqemde kfkecladta lgtklkynsy
      301 cqp
//
LOCUS       XP_061011569            2070 aa            linear   MAM 02-DEC-2023
DEFINITION  HEAT repeat-containing protein 5B isoform X1 [Dama dama].
ACCESSION   XP_061011569
VERSION     XP_061011569.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155586.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2070
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2070
                     /product="HEAT repeat-containing protein 5B isoform X1"
                     /calculated_mol_wt=224097
     Region          97..121
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            order(113..114,117,120..121,154..155,158,161..162,165,
                     195..196,199,202..203,206,236..237,240,243..244)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          137..165
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          177..207
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          218..244
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            order(831..832,835,838..839,842,870..871,874,877..878,881,
                     909..910,917,920..921,953..954,957,960..961)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          852..882
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          891..921
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          932..962
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          1288..1493
                     /region_name="Laa1_Sip1_HTR5"
                     /note="Laa1/Sip1/HEATR5 HEAT repeat region; pfam20210"
                     /db_xref="CDD:466361"
     CDS             1..2070
                     /gene="HEATR5B"
                     /coded_by="XM_061155586.1:108..6320"
                     /db_xref="GeneID:133065001"
ORIGIN      
        1 melahsllln eealaqitea krpvfifewl rfldkvlvaa nktdvkekqk klveqltgli
       61 ssspgpptrk llaknlaaly sigdtftvfq tldkcndiir skddtaaylp tklaavacvg
      121 afyekmgrml gsafpetvnn llkslksaes qgrseilmsl qkvlnglgga aaschrdiyk
      181 narslltdrs mavrcavakc llelqneavf mwtaelenia tlcfkalens nygvrvavsk
      241 llgavmatal mpkqatvmrq nvkratfdev lelmatgflr ggsgflksgg emlkvggsvn
      301 revrvgvtqa yvvfvttlgg hwlersfatf lshvldlvsh pratqthvea vysrrcvsfi
      361 lratvgsllg ekaqiaaake icqaigkqmk aveavvndts genksgaadi aasqhvmvca
      421 lqelgslvqs lnataspliq easiglletv tsvllhpsma arlaaawclr cvavalpfql
      481 tpfldrcaer lnnlktspea vsgysfamaa llggvhqcpl giphakgkmv vsiaedllrt
      541 aaqnsrlslq rtqagwlllg almtlgpsvv ryhlpkmlll wrnvfprslk eleaekargd
      601 sftwqvtleg ragalcamrs fvahcpellt edvirklmtp iecamtmmsh ipsvikahga
      661 hlkasaamvr lrlydilall ppktyegsfn allrelvaef tltdnsantt tsllrslchy
      721 ddsvllgswl qetdhksied qlqpnsasgs galehdpssi ylripageav pgplplgvsv
      781 idasvalfgv vfphvsfkhr lqmldhfaec vkqakgvrqq avqlniftav lsalkglaen
      841 kstlgpeevr ksaltlvmga ldnpnpilrc aagealgrma qvvgeatfia rmaqysfdkl
      901 ksardvvsrt ghslalgclh ryvggigsgq hlktsvsill alaqdgtsse vqtwslhsla
      961 livdssgpmy rgyveptlsl vltllltvpp shtevhqclg rclgaiittv gpelqgngat
     1021 istirssclv gcaitqdhsd slvqaaaisc lqqlhmfapr hvnlsslvps lcvhlcsshl
     1081 llrraavacl rqlaqreaae vceyamslak nsgdkessgt hvssfapgas srsdihcrhq
     1141 gvnitetgle gllfgmldre tdrklcsdih dtlghmlssl aveklshwlm lckdvlaass
     1201 dmstaaplss gkdeefekkd emdddtmftt lgeedkskpf vaprwatrvf aadclcriin
     1261 lcenadqahf dlamarsakl rnptndllvl hlsdlirmaf maatdhsnql rmaglqaled
     1321 iikkfasvpe pefpghvile qyqanvgaal rpafsqdtps diiakacqvc stwigsgvvs
     1381 dlndlrrvhn llvssldkvq agkgsssqly resattmekl avlkawaevy vvamnikkea
     1441 eskpkravkn tdddddddst idelppdsli tlvqpelpil srlwlaalkd yalltlpaef
     1501 asqlppdgga fytpetidta rlhyrnswap ilhavalwln stgftcsesa eaaaisalqk
     1561 rsipvnlsqa sgatpsaksl aeinkdrmhl ilgvsiqflc sprpeepveh vtaclqalht
     1621 lldspyarih iaedqligve llsvlhrlll twnppsvqll vtgvvqqivr aaqdylqekr
     1681 ntlneddmek escpvlgegg dsgglipgks lvfatmellm filvrhmphl stkmsdspsh
     1741 iatktrlsee sarlvaaavt ilsdlpslcs pagcmtvlpt ilfliarilk dtaiksadnq
     1801 vpppvsaalq giksivtlsm aktedtqkqw talirstlac ileysqpeds vpvpdevsml
     1861 taialflwsa gseiigvqsl qngciyrfkn alnscdpwvq akcyqlllsv fqhsnralst
     1921 pyihslaplv veklkavern rpgssaella vqegikvlet lvalgeeqnr vqllallvpt
     1981 lisylldens fasastaskd lhefalqnlm higplyphaf ktvmgaapel kvrletavra
     2041 sqaskakvat rqpaptvhsa ptiklktsff
//
LOCUS       XP_061011570            1945 aa            linear   MAM 02-DEC-2023
DEFINITION  HEAT repeat-containing protein 5B isoform X2 [Dama dama].
ACCESSION   XP_061011570
VERSION     XP_061011570.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155587.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1945
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1945
                     /product="HEAT repeat-containing protein 5B isoform X2"
                     /calculated_mol_wt=210244
     Site            order(706..707,710,713..714,717,745..746,749,752..753,756,
                     784..785,792,795..796,828..829,832,835..836)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          727..757
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          766..796
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          807..837
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          1163..1368
                     /region_name="Laa1_Sip1_HTR5"
                     /note="Laa1/Sip1/HEATR5 HEAT repeat region; pfam20210"
                     /db_xref="CDD:466361"
     CDS             1..1945
                     /gene="HEATR5B"
                     /coded_by="XM_061155587.1:219..6056"
                     /db_xref="GeneID:133065001"
ORIGIN      
        1 mgrmlgsafp etvnnllksl ksaesqgrse ilmslqkvln glggaaasch rdiyknarsl
       61 ltdrsmavrc avakcllelq neavfmwtae leniatlcfk alensnygvr vavskllgav
      121 matalmpkqa tvmrqnvkra tfdevlelma tgflrggsgf lksggemlkv ggsvnrevrv
      181 gvtqayvvfv ttlgghwler sfatflshvl dlvshpratq thveavysrr cvsfilratv
      241 gsllgekaqi aaakeicqai gkqmkaveav vndtsgenks gaadiaasqh vmvcalqelg
      301 slvqslnata spliqeasig lletvtsvll hpsmaarlaa awclrcvava lpfqltpfld
      361 rcaerlnnlk tspeavsgys famaallggv hqcplgipha kgkmvvsiae dllrtaaqns
      421 rlslqrtqag wlllgalmtl gpsvvryhlp kmlllwrnvf prslkeleae kargdsftwq
      481 vtlegragal camrsfvahc pelltedvir klmtpiecam tmmshipsvi kahgahlkas
      541 aamvrlrlyd ilallppkty egsfnallre lvaeftltdn santttsllr slchyddsvl
      601 lgswlqetdh ksiedqlqpn sasgsgaleh dpssiylrip ageavpgplp lgvsvidasv
      661 alfgvvfphv sfkhrlqmld hfaecvkqak gvrqqavqln iftavlsalk glaenkstlg
      721 peevrksalt lvmgaldnpn pilrcaagea lgrmaqvvge atfiarmaqy sfdklksard
      781 vvsrtghsla lgclhryvgg igsgqhlkts vsillalaqd gtssevqtws lhslalivds
      841 sgpmyrgyve ptlslvltll ltvppshtev hqclgrclga iittvgpelq gngatistir
      901 ssclvgcait qdhsdslvqa aaisclqqlh mfaprhvnls slvpslcvhl csshlllrra
      961 avaclrqlaq reaaevceya mslaknsgdk essgthvssf apgassrsdi hcrhqgvnit
     1021 etglegllfg mldretdrkl csdihdtlgh mlsslavekl shwlmlckdv laassdmsta
     1081 aplssgkdee fekkdemddd tmfttlgeed kskpfvaprw atrvfaadcl criinlcena
     1141 dqahfdlama rsaklrnptn dllvlhlsdl irmafmaatd hsnqlrmagl qalediikkf
     1201 asvpepefpg hvileqyqan vgaalrpafs qdtpsdiiak acqvcstwig sgvvsdlndl
     1261 rrvhnllvss ldkvqagkgs ssqlyresat tmeklavlka waevyvvamn ikkeaeskpk
     1321 ravkntdddd dddstidelp pdslitlvqp elpilsrlwl aalkdyallt lpaefasqlp
     1381 pdggafytpe tidtarlhyr nswapilhav alwlnstgft csesaeaaai salqkrsipv
     1441 nlsqasgatp sakslaeink drmhlilgvs iqflcsprpe epvehvtacl qalhtlldsp
     1501 yarihiaedq ligvellsvl hrllltwnpp svqllvtgvv qqivraaqdy lqekrntlne
     1561 ddmekescpv lgeggdsggl ipgkslvfat mellmfilvr hmphlstkms dspshiatkt
     1621 rlseesarlv aaavtilsdl pslcspagcm tvlptilfli arilkdtaik sadnqvpppv
     1681 saalqgiksi vtlsmakted tqkqwtalir stlacileys qpedsvpvpd evsmltaial
     1741 flwsagseii gvqslqngci yrfknalnsc dpwvqakcyq lllsvfqhsn ralstpyihs
     1801 laplvveklk avernrpgss aellavqegi kvletlvalg eeqnrvqlla llvptlisyl
     1861 ldensfasas taskdlhefa lqnlmhigpl yphafktvmg aapelkvrle tavrasqask
     1921 akvatrqpap tvhsaptikl ktsff
//
LOCUS       XP_061011571            1055 aa            linear   MAM 02-DEC-2023
DEFINITION  CCAAT/enhancer-binding protein zeta isoform X1 [Dama dama].
ACCESSION   XP_061011571
VERSION     XP_061011571.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155588.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1055
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1055
                     /product="CCAAT/enhancer-binding protein zeta isoform X1"
                     /calculated_mol_wt=121254
     Region          159..990
                     /region_name="COG5593"
                     /note="Nucleic-acid-binding protein possibly involved in
                     ribosomal biogenesis [Translation, ribosomal structure and
                     biogenesis]"
                     /db_xref="CDD:227880"
     CDS             1..1055
                     /gene="CEBPZ"
                     /coded_by="XM_061155588.1:51..3218"
                     /db_xref="GeneID:133065002"
ORIGIN      
        1 maaaekplef yakrpwgpen gledpdedee ddndetedaf slqevlrlgg tkqdylmlaa
       61 ldeneevvdg gkkgavddlq qgeleafiqn lslakyakaf lieedqpakk eesskkearv
      121 skvdskkqkt aeseskvknk krpeqhsden nsaitktkkd kqqdifeffe rqtlllksgg
      181 kwydleysde yclepqprdv vskykalaqk lyeheinlfk nktnnqkgas stwmkaivss
      241 gtlgdrmaam illiqddaih tlqfvetlvn lvkkkgskqq clmaldtfke llitdllpdn
      301 rklrvfsqhp fnkleqlssg nrdsrdrrli vwyfehqlkh lvaefvqvle tlshdslvtt
      361 ktralmvahe llcnkpeeek aflvqvvnkl gdpqnriatk ashlletllc khpnmkgvvc
      421 geverllfrs nisakaqyya icflnqmvls heeselankl itlyfcffrt cikkkdiesk
      481 mlsalltgvn raypyaqtgd dkvreqvdtl fkvlhavnfn tsvqalmllf qvmnsqqtis
      541 dryyaalyrk mldpglmlcs kqamflnlvy kslkadivlr rvkafvkrll qvtceqmppf
      601 icgalylvse ilkakpglrs qlddhlesde eenfidiadd eeaekftdad ketetdtvkk
      661 aemekteses hvgtrkvesa swvhfdnlkg gkrlntydpf srnplycgae ntslwelkkl
      721 sehfhpsval faktilqgny ieysgdplqd ftlmrfldrf vyrnpkphkg kentdsvvmq
      781 pkrkhfmkdi rslavnskef lakeesqipv devffyryyk kvasvkvkqk rnedeesied
      841 vddeefekmi dtfeddncft sgtddldfas nmkkkakgak ddsededsed ddldnlddde
      901 vslgsmneef aeieedggtf mdvlddeneg ipelddevrl kvsnkknkrk gangfdfags
      961 fqgprkkkkr dfddsnvfvs aeefghllde nmgskfdnig mnamankdna slkqlrweae
     1021 rddwlhnrdv ksiikrkknf rkrpkttqki krqrk
//
LOCUS       XP_061011572             999 aa            linear   MAM 02-DEC-2023
DEFINITION  CCAAT/enhancer-binding protein zeta isoform X2 [Dama dama].
ACCESSION   XP_061011572
VERSION     XP_061011572.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155589.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..999
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..999
                     /product="CCAAT/enhancer-binding protein zeta isoform X2"
                     /calculated_mol_wt=114883
     Region          103..934
                     /region_name="COG5593"
                     /note="Nucleic-acid-binding protein possibly involved in
                     ribosomal biogenesis [Translation, ribosomal structure and
                     biogenesis]"
                     /db_xref="CDD:227880"
     CDS             1..999
                     /gene="CEBPZ"
                     /coded_by="XM_061155589.1:349..3348"
                     /db_xref="GeneID:133065002"
ORIGIN      
        1 mlaaldenee vvdggkkgav ddlqqgelea fiqnlslaky akaflieedq pakkeesskk
       61 earvskvdsk kqktaesesk vknkkrpeqh sdennsaitk tkkdkqqdif efferqtlll
      121 ksggkwydle ysdeyclepq prdvvskyka laqklyehei nlfknktnnq kgasstwmka
      181 ivssgtlgdr maamilliqd daihtlqfve tlvnlvkkkg skqqclmald tfkellitdl
      241 lpdnrklrvf sqhpfnkleq lssgnrdsrd rrlivwyfeh qlkhlvaefv qvletlshds
      301 lvttktralm vahellcnkp eeekaflvqv vnklgdpqnr iatkashlle tllckhpnmk
      361 gvvcgeverl lfrsnisaka qyyaicflnq mvlsheesel anklitlyfc ffrtcikkkd
      421 ieskmlsall tgvnraypya qtgddkvreq vdtlfkvlha vnfntsvqal mllfqvmnsq
      481 qtisdryyaa lyrkmldpgl mlcskqamfl nlvykslkad ivlrrvkafv krllqvtceq
      541 mppficgaly lvseilkakp glrsqlddhl esdeeenfid iaddeeaekf tdadketetd
      601 tvkkaemekt eseshvgtrk vesaswvhfd nlkggkrlnt ydpfsrnply cgaentslwe
      661 lkklsehfhp svalfaktil qgnyieysgd plqdftlmrf ldrfvyrnpk phkgkentds
      721 vvmqpkrkhf mkdirslavn skeflakees qipvdevffy ryykkvasvk vkqkrnedee
      781 siedvddeef ekmidtfedd ncftsgtddl dfasnmkkka kgakddsede dsedddldnl
      841 dddevslgsm neefaeieed ggtfmdvldd enegipeldd evrlkvsnkk nkrkgangfd
      901 fagsfqgprk kkkrdfddsn vfvsaeefgh lldenmgskf dnigmnaman kdnaslkqlr
      961 weaerddwlh nrdvksiikr kknfrkrpkt tqkikrqrk
//
LOCUS       XP_061011573             915 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase D3 isoform X1 [Dama dama].
ACCESSION   XP_061011573
VERSION     XP_061011573.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155590.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..915
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..915
                     /product="serine/threonine-protein kinase D3 isoform X1"
                     /calculated_mol_wt=103032
     Region          145..219
                     /region_name="C1_PKD3_rpt1"
                     /note="first protein kinase C conserved region 1 (C1
                     domain) found in protein kinase D3 (PKD3) and similar
                     proteins; cd20841"
                     /db_xref="CDD:410391"
     Site            order(160..166,174..178,181)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410391"
     Region          267..335
                     /region_name="C1"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     superfamily; cl00040"
                     /db_xref="CDD:412127"
     Region          410..534
                     /region_name="PH_PKD"
                     /note="Protein kinase D (PKD/PKCmu) pleckstrin homology
                     (PH) domain; cd01239"
                     /db_xref="CDD:269945"
     Region          597..856
                     /region_name="STKc_PKD"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Protein Kinase D; cd14082"
                     /db_xref="CDD:270984"
     Site            order(607..611,615,628,630,661,677..680,683,685,723..724,
                     726,728..729,731,744..745,748,762..766,768)
                     /site_type="active"
                     /db_xref="CDD:270984"
     Site            order(607..610,615,628,630,661,677..680,683,728..729,731,
                     744..745)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270984"
     Site            order(611,683,685,723..724,726,728,748,762..766,768)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270984"
     Site            744..766
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270984"
     CDS             1..915
                     /gene="PRKD3"
                     /coded_by="XM_061155590.1:813..3560"
                     /db_xref="GeneID:133065003"
ORIGIN      
        1 msanssppsa qksvipatlp avlpapspcs spktglsarl sdgsfrapsl tnsrgsvhtv
       61 sfllqigltr esitieaqel slsavkdlvc sivyqkfpec gffgmydkil lfrhdmnsen
      121 ilqlitsade ihegdlvevv lsalatvedf qirphtlyvh sykaptfcdy cgemlwglvr
      181 qglkcegcgl nyhkrcafki pnncsgvrkr rlsnvslpgp glsvprplqt dyvalptees
      241 hvhqepskri pswsgrpiwm ekmvmcrvkv phtfavhsyt rpticqyckr llkglfrqgm
      301 qckdckfnch krcaskvprd clgevtfnge pstlgtdtdi pmdvdssdmn sdgsrglddt
      361 eepsppedkm ffldpsdldv erdeeavkti spstsnnipl mrvvqsikht krksstmvke
      421 gwmvhytsrd tlrkrhywrl dskcltlfqn esgskyykei plseilriss pqdftsisqg
      481 snphcfeiit dtmvyfvgen ngdsshnpvl aatgvgldva qswekairqa lmpvtpqasv
      541 ctspgqgkdh iprvrlhsqv slhlnlgsad llcdledlst sisvsncqiq envdistvyq
      601 ifadevlgsg qfgivyggkh rktgrdvaik vidkmrfptk qesqlrneva ilqnlhhpgi
      661 vnlecmfetp ervfvvmekl hgdmlemils seksrlperi tkfmvtqilv alrnlhfkni
      721 vhcdlkpenv llasaepfpq vklcdfgfar iigeksfrrs vvgtpaylap evlrskgynr
      781 sldmwsvgvi vyvslsgtfp fnededindq iqnaafmypp npwreisgea idlinnllqv
      841 kmrkrysvdk slshpwlqdy qtwldlrefe trigeryith esddarweih aythnlvypk
      901 hfimapnpdd meedp
//
LOCUS       XP_061011574             915 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase D3 isoform X1 [Dama dama].
ACCESSION   XP_061011574
VERSION     XP_061011574.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155591.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..915
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..915
                     /product="serine/threonine-protein kinase D3 isoform X1"
                     /calculated_mol_wt=103032
     Region          145..219
                     /region_name="C1_PKD3_rpt1"
                     /note="first protein kinase C conserved region 1 (C1
                     domain) found in protein kinase D3 (PKD3) and similar
                     proteins; cd20841"
                     /db_xref="CDD:410391"
     Site            order(160..166,174..178,181)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410391"
     Region          267..335
                     /region_name="C1"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     superfamily; cl00040"
                     /db_xref="CDD:412127"
     Region          410..534
                     /region_name="PH_PKD"
                     /note="Protein kinase D (PKD/PKCmu) pleckstrin homology
                     (PH) domain; cd01239"
                     /db_xref="CDD:269945"
     Region          597..856
                     /region_name="STKc_PKD"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Protein Kinase D; cd14082"
                     /db_xref="CDD:270984"
     Site            order(607..611,615,628,630,661,677..680,683,685,723..724,
                     726,728..729,731,744..745,748,762..766,768)
                     /site_type="active"
                     /db_xref="CDD:270984"
     Site            order(607..610,615,628,630,661,677..680,683,728..729,731,
                     744..745)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270984"
     Site            order(611,683,685,723..724,726,728,748,762..766,768)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270984"
     Site            744..766
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270984"
     CDS             1..915
                     /gene="PRKD3"
                     /coded_by="XM_061155591.1:780..3527"
                     /db_xref="GeneID:133065003"
ORIGIN      
        1 msanssppsa qksvipatlp avlpapspcs spktglsarl sdgsfrapsl tnsrgsvhtv
       61 sfllqigltr esitieaqel slsavkdlvc sivyqkfpec gffgmydkil lfrhdmnsen
      121 ilqlitsade ihegdlvevv lsalatvedf qirphtlyvh sykaptfcdy cgemlwglvr
      181 qglkcegcgl nyhkrcafki pnncsgvrkr rlsnvslpgp glsvprplqt dyvalptees
      241 hvhqepskri pswsgrpiwm ekmvmcrvkv phtfavhsyt rpticqyckr llkglfrqgm
      301 qckdckfnch krcaskvprd clgevtfnge pstlgtdtdi pmdvdssdmn sdgsrglddt
      361 eepsppedkm ffldpsdldv erdeeavkti spstsnnipl mrvvqsikht krksstmvke
      421 gwmvhytsrd tlrkrhywrl dskcltlfqn esgskyykei plseilriss pqdftsisqg
      481 snphcfeiit dtmvyfvgen ngdsshnpvl aatgvgldva qswekairqa lmpvtpqasv
      541 ctspgqgkdh iprvrlhsqv slhlnlgsad llcdledlst sisvsncqiq envdistvyq
      601 ifadevlgsg qfgivyggkh rktgrdvaik vidkmrfptk qesqlrneva ilqnlhhpgi
      661 vnlecmfetp ervfvvmekl hgdmlemils seksrlperi tkfmvtqilv alrnlhfkni
      721 vhcdlkpenv llasaepfpq vklcdfgfar iigeksfrrs vvgtpaylap evlrskgynr
      781 sldmwsvgvi vyvslsgtfp fnededindq iqnaafmypp npwreisgea idlinnllqv
      841 kmrkrysvdk slshpwlqdy qtwldlrefe trigeryith esddarweih aythnlvypk
      901 hfimapnpdd meedp
//
LOCUS       XP_061011575             890 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase D3 isoform X2 [Dama dama].
ACCESSION   XP_061011575
VERSION     XP_061011575.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155592.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..890
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..890
                     /product="serine/threonine-protein kinase D3 isoform X2"
                     /calculated_mol_wt=100279
     Region          145..219
                     /region_name="C1_PKD3_rpt1"
                     /note="first protein kinase C conserved region 1 (C1
                     domain) found in protein kinase D3 (PKD3) and similar
                     proteins; cd20841"
                     /db_xref="CDD:410391"
     Site            order(160..166,174..178,181)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410391"
     Region          267..335
                     /region_name="C1"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     superfamily; cl00040"
                     /db_xref="CDD:412127"
     Region          410..534
                     /region_name="PH_PKD"
                     /note="Protein kinase D (PKD/PKCmu) pleckstrin homology
                     (PH) domain; cd01239"
                     /db_xref="CDD:269945"
     Region          572..831
                     /region_name="STKc_PKD"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Protein Kinase D; cd14082"
                     /db_xref="CDD:270984"
     Site            order(582..586,590,603,605,636,652..655,658,660,698..699,
                     701,703..704,706,719..720,723,737..741,743)
                     /site_type="active"
                     /db_xref="CDD:270984"
     Site            order(582..585,590,603,605,636,652..655,658,703..704,706,
                     719..720)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270984"
     Site            order(586,658,660,698..699,701,703,723,737..741,743)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270984"
     Site            719..741
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270984"
     CDS             1..890
                     /gene="PRKD3"
                     /coded_by="XM_061155592.1:813..3485"
                     /db_xref="GeneID:133065003"
ORIGIN      
        1 msanssppsa qksvipatlp avlpapspcs spktglsarl sdgsfrapsl tnsrgsvhtv
       61 sfllqigltr esitieaqel slsavkdlvc sivyqkfpec gffgmydkil lfrhdmnsen
      121 ilqlitsade ihegdlvevv lsalatvedf qirphtlyvh sykaptfcdy cgemlwglvr
      181 qglkcegcgl nyhkrcafki pnncsgvrkr rlsnvslpgp glsvprplqt dyvalptees
      241 hvhqepskri pswsgrpiwm ekmvmcrvkv phtfavhsyt rpticqyckr llkglfrqgm
      301 qckdckfnch krcaskvprd clgevtfnge pstlgtdtdi pmdvdssdmn sdgsrglddt
      361 eepsppedkm ffldpsdldv erdeeavkti spstsnnipl mrvvqsikht krksstmvke
      421 gwmvhytsrd tlrkrhywrl dskcltlfqn esgskyykei plseilriss pqdftsisqg
      481 snphcfeiit dtmvyfvgen ngdsshnpvl aatgvgldva qswekairqa lmpvtpqasv
      541 ctspgqgkdh kdlstsisvs ncqiqenvdi stvyqifade vlgsgqfgiv yggkhrktgr
      601 dvaikvidkm rfptkqesql rnevailqnl hhpgivnlec mfetpervfv vmeklhgdml
      661 emilsseksr lperitkfmv tqilvalrnl hfknivhcdl kpenvllasa epfpqvklcd
      721 fgfariigek sfrrsvvgtp aylapevlrs kgynrsldmw svgvivyvsl sgtfpfnede
      781 dindqiqnaa fmyppnpwre isgeaidlin nllqvkmrkr ysvdkslshp wlqdyqtwld
      841 lrefetrige ryithesdda rweihaythn lvypkhfima pnpddmeedp
//
LOCUS       XP_061011576             811 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase D3 isoform X3 [Dama dama].
ACCESSION   XP_061011576
VERSION     XP_061011576.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155593.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..811
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..811
                     /product="serine/threonine-protein kinase D3 isoform X3"
                     /calculated_mol_wt=92212
     Region          41..115
                     /region_name="C1_PKD3_rpt1"
                     /note="first protein kinase C conserved region 1 (C1
                     domain) found in protein kinase D3 (PKD3) and similar
                     proteins; cd20841"
                     /db_xref="CDD:410391"
     Site            order(56..62,70..74,77)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410391"
     Region          163..231
                     /region_name="C1"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     superfamily; cl00040"
                     /db_xref="CDD:412127"
     Region          306..430
                     /region_name="PH_PKD"
                     /note="Protein kinase D (PKD/PKCmu) pleckstrin homology
                     (PH) domain; cd01239"
                     /db_xref="CDD:269945"
     Region          493..752
                     /region_name="STKc_PKD"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Protein Kinase D; cd14082"
                     /db_xref="CDD:270984"
     Site            order(503..507,511,524,526,557,573..576,579,581,619..620,
                     622,624..625,627,640..641,644,658..662,664)
                     /site_type="active"
                     /db_xref="CDD:270984"
     Site            order(503..506,511,524,526,557,573..576,579,624..625,627,
                     640..641)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270984"
     Site            order(507,579,581,619..620,622,624,644,658..662,664)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270984"
     Site            640..662
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270984"
     CDS             1..811
                     /gene="PRKD3"
                     /coded_by="XM_061155593.1:221..2656"
                     /db_xref="GeneID:133065003"
ORIGIN      
        1 mydkillfrh dmnsenilql itsadeiheg dlvevvlsal atvedfqirp htlyvhsyka
       61 ptfcdycgem lwglvrqglk cegcglnyhk rcafkipnnc sgvrkrrlsn vslpgpglsv
      121 prplqtdyva lpteeshvhq epskripsws grpiwmekmv mcrvkvphtf avhsytrpti
      181 cqyckrllkg lfrqgmqckd ckfnchkrca skvprdclge vtfngepstl gtdtdipmdv
      241 dssdmnsdgs rglddteeps ppedkmffld psdldverde eavktispst snniplmrvv
      301 qsikhtkrks stmvkegwmv hytsrdtlrk rhywrldskc ltlfqnesgs kyykeiplse
      361 ilrisspqdf tsisqgsnph cfeiitdtmv yfvgenngds shnpvlaatg vgldvaqswe
      421 kairqalmpv tpqasvctsp gqgkdhiprv rlhsqvslhl nlgsadllcd ledlstsisv
      481 sncqiqenvd istvyqifad evlgsgqfgi vyggkhrktg rdvaikvidk mrfptkqesq
      541 lrnevailqn lhhpgivnle cmfetpervf vvmeklhgdm lemilsseks rlperitkfm
      601 vtqilvalrn lhfknivhcd lkpenvllas aepfpqvklc dfgfariige ksfrrsvvgt
      661 paylapevlr skgynrsldm wsvgvivyvs lsgtfpfned edindqiqna afmyppnpwr
      721 eisgeaidli nnllqvkmrk rysvdkslsh pwlqdyqtwl dlrefetrig eryithesdd
      781 arweihayth nlvypkhfim apnpddmeed p
//
LOCUS       XP_061011577             811 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase D3 isoform X3 [Dama dama].
ACCESSION   XP_061011577
VERSION     XP_061011577.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155594.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..811
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..811
                     /product="serine/threonine-protein kinase D3 isoform X3"
                     /calculated_mol_wt=92212
     Region          41..115
                     /region_name="C1_PKD3_rpt1"
                     /note="first protein kinase C conserved region 1 (C1
                     domain) found in protein kinase D3 (PKD3) and similar
                     proteins; cd20841"
                     /db_xref="CDD:410391"
     Site            order(56..62,70..74,77)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410391"
     Region          163..231
                     /region_name="C1"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     superfamily; cl00040"
                     /db_xref="CDD:412127"
     Region          306..430
                     /region_name="PH_PKD"
                     /note="Protein kinase D (PKD/PKCmu) pleckstrin homology
                     (PH) domain; cd01239"
                     /db_xref="CDD:269945"
     Region          493..752
                     /region_name="STKc_PKD"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Protein Kinase D; cd14082"
                     /db_xref="CDD:270984"
     Site            order(503..507,511,524,526,557,573..576,579,581,619..620,
                     622,624..625,627,640..641,644,658..662,664)
                     /site_type="active"
                     /db_xref="CDD:270984"
     Site            order(503..506,511,524,526,557,573..576,579,624..625,627,
                     640..641)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270984"
     Site            order(507,579,581,619..620,622,624,644,658..662,664)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270984"
     Site            640..662
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270984"
     CDS             1..811
                     /gene="PRKD3"
                     /coded_by="XM_061155594.1:149..2584"
                     /db_xref="GeneID:133065003"
ORIGIN      
        1 mydkillfrh dmnsenilql itsadeiheg dlvevvlsal atvedfqirp htlyvhsyka
       61 ptfcdycgem lwglvrqglk cegcglnyhk rcafkipnnc sgvrkrrlsn vslpgpglsv
      121 prplqtdyva lpteeshvhq epskripsws grpiwmekmv mcrvkvphtf avhsytrpti
      181 cqyckrllkg lfrqgmqckd ckfnchkrca skvprdclge vtfngepstl gtdtdipmdv
      241 dssdmnsdgs rglddteeps ppedkmffld psdldverde eavktispst snniplmrvv
      301 qsikhtkrks stmvkegwmv hytsrdtlrk rhywrldskc ltlfqnesgs kyykeiplse
      361 ilrisspqdf tsisqgsnph cfeiitdtmv yfvgenngds shnpvlaatg vgldvaqswe
      421 kairqalmpv tpqasvctsp gqgkdhiprv rlhsqvslhl nlgsadllcd ledlstsisv
      481 sncqiqenvd istvyqifad evlgsgqfgi vyggkhrktg rdvaikvidk mrfptkqesq
      541 lrnevailqn lhhpgivnle cmfetpervf vvmeklhgdm lemilsseks rlperitkfm
      601 vtqilvalrn lhfknivhcd lkpenvllas aepfpqvklc dfgfariige ksfrrsvvgt
      661 paylapevlr skgynrsldm wsvgvivyvs lsgtfpfned edindqiqna afmyppnpwr
      721 eisgeaidli nnllqvkmrk rysvdkslsh pwlqdyqtwl dlrefetrig eryithesdd
      781 arweihayth nlvypkhfim apnpddmeed p
//
LOCUS       XP_061011578             541 aa            linear   MAM 02-DEC-2023
DEFINITION  interferon-induced, double-stranded RNA-activated protein kinase
            isoform X1 [Dama dama].
ACCESSION   XP_061011578
VERSION     XP_061011578.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155595.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..541
                     /product="interferon-induced, double-stranded
                     RNA-activated protein kinase isoform X1"
                     /calculated_mol_wt=61507
     Region          9..>62
                     /region_name="DSRM_SF"
                     /note="double-stranded RNA binding motif (DSRM)
                     superfamily; cl00054"
                     /db_xref="CDD:444671"
     Site            order(15..16,18,41,59..61)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:380679"
     Region          97..162
                     /region_name="DSRM_EIF2AK2_rpt2"
                     /note="second double-stranded RNA binding motif of
                     eukaryotic translation initiation factor 2-alpha kinase 2
                     (EIF2AK2) and similar proteins; cd19904"
                     /db_xref="CDD:380733"
     Site            order(98..99,102..103,106..107,112..113,124..125,126,128,
                     145..148,151..152)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:380733"
     Region          256..526
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(269..272,275,277,290,292,317,356..359,404,408..409,
                     411,421..422)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..541
                     /gene="EIF2AK2"
                     /coded_by="XM_061155595.1:287..1912"
                     /db_xref="GeneID:133065005"
ORIGIN      
        1 matgrspcfy ieelnkyqqk ngvevkycel aktgpphnyr ftyqviidgk efpkaegrsk
       61 keaknaaakl afeminksvt fssplttntp egppienyig rlntisqkkn lcvtyeecks
      121 kgdghegfry kckigqkeyg igvgftkqea kqlaaklaye kiesetmrad rssdcfnavs
      181 gevernsqam stsssespse ngfsksaser sdnsdtnssf ltpgdsfrnn arkvkrslap
      241 nfyspmrtee nsysadprlv kdftevtpig sggfgqvfka khridmktyv ikcvkynsak
      301 verevkalat lnhpnivhyy scwdgldydp eksinfsrty secyprpktr clfiqmeycd
      361 kgtleqwidk rrgkepdkdl aleffqqivt gvhyihskdl ihrdlkpgni flvtmnqiki
      421 gdfglvtylk ndemrtskkg twrymspeql ssvkdygnev diyalglila elihicptsl
      481 etsklfedlr sgnldvfdgk ekdllkklls edpkkrptts eilktlkvwn nvterrklnt
      541 y
//
LOCUS       XP_061011579             540 aa            linear   MAM 02-DEC-2023
DEFINITION  interferon-induced, double-stranded RNA-activated protein kinase
            isoform X2 [Dama dama].
ACCESSION   XP_061011579
VERSION     XP_061011579.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155596.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..540
                     /product="interferon-induced, double-stranded
                     RNA-activated protein kinase isoform X2"
                     /calculated_mol_wt=61420
     Region          9..>62
                     /region_name="DSRM_SF"
                     /note="double-stranded RNA binding motif (DSRM)
                     superfamily; cl00054"
                     /db_xref="CDD:444671"
     Site            order(15..16,18,41,59..61)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:380679"
     Region          97..162
                     /region_name="DSRM_EIF2AK2_rpt2"
                     /note="second double-stranded RNA binding motif of
                     eukaryotic translation initiation factor 2-alpha kinase 2
                     (EIF2AK2) and similar proteins; cd19904"
                     /db_xref="CDD:380733"
     Site            order(98..99,102..103,106..107,112..113,124..125,126,128,
                     145..148,151..152)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:380733"
     Region          255..525
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(268..271,274,276,289,291,316,355..358,403,407..408,
                     410,420..421)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..540
                     /gene="EIF2AK2"
                     /coded_by="XM_061155596.1:288..1910"
                     /db_xref="GeneID:133065005"
ORIGIN      
        1 matgrspcfy ieelnkyqqk ngvevkycel aktgpphnyr ftyqviidgk efpkaegrsk
       61 keaknaaakl afeminksvt fssplttntp egppienyig rlntisqkkn lcvtyeecks
      121 kgdghegfry kckigqkeyg igvgftkqea kqlaaklaye kiesetmrad rssdcfnavs
      181 gevernsqam stssespsen gfsksasers dnsdtnssfl tpgdsfrnna rkvkrslapn
      241 fyspmrteen sysadprlvk dftevtpigs ggfgqvfkak hridmktyvi kcvkynsakv
      301 erevkalatl nhpnivhyys cwdgldydpe ksinfsrtys ecyprpktrc lfiqmeycdk
      361 gtleqwidkr rgkepdkdla leffqqivtg vhyihskdli hrdlkpgnif lvtmnqikig
      421 dfglvtylkn demrtskkgt wrymspeqls svkdygnevd iyalglilae lihicptsle
      481 tsklfedlrs gnldvfdgke kdllkkllse dpkkrpttse ilktlkvwnn vterrklnty
//
LOCUS       XP_061011580             441 aa            linear   MAM 02-DEC-2023
DEFINITION  protein arginine methyltransferase NDUFAF7, mitochondrial [Dama
            dama].
ACCESSION   XP_061011580
VERSION     XP_061011580.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155597.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..441
                     /product="protein arginine methyltransferase NDUFAF7,
                     mitochondrial"
                     /calculated_mol_wt=49326
     Region          41..407
                     /region_name="MidA"
                     /note="SAM-dependent methyltransferase, MidA family
                     [General function prediction only]; COG1565"
                     /db_xref="CDD:441173"
     CDS             1..441
                     /gene="NDUFAF7"
                     /coded_by="XM_061155597.1:61..1386"
                     /db_xref="GeneID:133065006"
ORIGIN      
        1 mnflaaagar rlcamravfp ylwrgkyfss gnepaennsv tpmlrhliyk ikstgpitva
       61 eymkevltnp akgyymnrdm lgeegdfits peisqmfgel lgiwfisewi aagknaafql
      121 velgpgkgtl lgdilrvfsq lgsllkncdi slhlvevsqk lseiqaltlt eekvplerha
      181 espvymkgvt ksgipvswyr dlqdvpkeys fylaheffdv lpvhkfqktp hgwrevlvdi
      241 dpqvsdklrf vlapcatpae afiqndetrd hvevcpeagv viqelseris ltggaaliad
      301 yghdgtktdt frgfcghrlh dvltapgtad ltadvdfsyl rrmsqgkvas lgpieqqtfl
      361 rnmgidvrlk illdkteeps lrqqllqgyn mlmnpmkmge rfnflalvph qrlhgrnhqt
      421 narqskpsps pvagfgelaw r
//
LOCUS       XP_061011581             264 aa            linear   MAM 02-DEC-2023
DEFINITION  G patch domain-containing protein 11 [Dama dama].
ACCESSION   XP_061011581
VERSION     XP_061011581.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155598.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..264
                     /product="G patch domain-containing protein 11"
                     /calculated_mol_wt=30738
     Region          74..117
                     /region_name="G-patch"
                     /note="G-patch domain; pfam01585"
                     /db_xref="CDD:396249"
     Region          216..263
                     /region_name="DUF4187"
                     /note="Domain of unknown function (DUF4187); pfam13821"
                     /db_xref="CDD:463989"
     CDS             1..264
                     /gene="GPATCH11"
                     /coded_by="XM_061155598.1:141..935"
                     /db_xref="GeneID:133065007"
ORIGIN      
        1 mklnmaeeed ymsdsfinvq ddirpglpml rqirearrke ekrqeanlkn rqksikeeeq
       61 errdmglkna lgcenkgfal lqkmgyksgq algksgdgiv epiplnvktg ksgighetll
      121 krkaeekles yrrkihmksq aeeraaeqfr irlknkqdem klegdlrrsq racqqldaqk
      181 niqvpreawy wlrpeeetke eaeeekeqde deyksedlsv leklqiltsy lreehlyciw
      241 cgtayedked lssncpgpts adhd
//
LOCUS       XP_061011582             264 aa            linear   MAM 02-DEC-2023
DEFINITION  G patch domain-containing protein 11 [Dama dama].
ACCESSION   XP_061011582
VERSION     XP_061011582.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155599.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..264
                     /product="G patch domain-containing protein 11"
                     /calculated_mol_wt=30738
     Region          74..117
                     /region_name="G-patch"
                     /note="G-patch domain; pfam01585"
                     /db_xref="CDD:396249"
     Region          216..263
                     /region_name="DUF4187"
                     /note="Domain of unknown function (DUF4187); pfam13821"
                     /db_xref="CDD:463989"
     CDS             1..264
                     /gene="GPATCH11"
                     /coded_by="XM_061155599.1:270..1064"
                     /db_xref="GeneID:133065007"
ORIGIN      
        1 mklnmaeeed ymsdsfinvq ddirpglpml rqirearrke ekrqeanlkn rqksikeeeq
       61 errdmglkna lgcenkgfal lqkmgyksgq algksgdgiv epiplnvktg ksgighetll
      121 krkaeekles yrrkihmksq aeeraaeqfr irlknkqdem klegdlrrsq racqqldaqk
      181 niqvpreawy wlrpeeetke eaeeekeqde deyksedlsv leklqiltsy lreehlyciw
      241 cgtayedked lssncpgpts adhd
//
LOCUS       XP_061011583             264 aa            linear   MAM 02-DEC-2023
DEFINITION  G patch domain-containing protein 11 [Dama dama].
ACCESSION   XP_061011583
VERSION     XP_061011583.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155600.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..264
                     /product="G patch domain-containing protein 11"
                     /calculated_mol_wt=30738
     Region          74..117
                     /region_name="G-patch"
                     /note="G-patch domain; pfam01585"
                     /db_xref="CDD:396249"
     Region          216..263
                     /region_name="DUF4187"
                     /note="Domain of unknown function (DUF4187); pfam13821"
                     /db_xref="CDD:463989"
     CDS             1..264
                     /gene="GPATCH11"
                     /coded_by="XM_061155600.1:235..1029"
                     /db_xref="GeneID:133065007"
ORIGIN      
        1 mklnmaeeed ymsdsfinvq ddirpglpml rqirearrke ekrqeanlkn rqksikeeeq
       61 errdmglkna lgcenkgfal lqkmgyksgq algksgdgiv epiplnvktg ksgighetll
      121 krkaeekles yrrkihmksq aeeraaeqfr irlknkqdem klegdlrrsq racqqldaqk
      181 niqvpreawy wlrpeeetke eaeeekeqde deyksedlsv leklqiltsy lreehlyciw
      241 cgtayedked lssncpgpts adhd
//
LOCUS       XP_061011584              90 aa            linear   MAM 02-DEC-2023
DEFINITION  protein CEBPZOS isoform X1 [Dama dama].
ACCESSION   XP_061011584
VERSION     XP_061011584.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155601.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..90
                     /product="protein CEBPZOS isoform X1"
                     /calculated_mol_wt=10333
     CDS             1..90
                     /gene="CEBPZOS"
                     /coded_by="XM_061155601.1:611..883"
                     /db_xref="GeneID:133065008"
ORIGIN      
        1 metspplgsr msrsmdplak kifkgvlvae lmgvfgayfl fnkmntsqdf rhtmskkfpf
       61 ilevyyksie hsgmygireq dqekwlsskn
//
LOCUS       XP_061011585              80 aa            linear   MAM 02-DEC-2023
DEFINITION  protein CEBPZOS isoform X2 [Dama dama].
ACCESSION   XP_061011585
VERSION     XP_061011585.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155602.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..80
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..80
                     /product="protein CEBPZOS isoform X2"
                     /calculated_mol_wt=9277
     CDS             1..80
                     /gene="CEBPZOS"
                     /coded_by="XM_061155602.1:74..316"
                     /db_xref="GeneID:133065008"
ORIGIN      
        1 msrsmdplak kifkgvlvae lmgvfgayfl fnkmntsqdf rhtmskkfpf ilevyyksie
       61 hsgmygireq dqekwlsskn
//
LOCUS       XP_061011586              80 aa            linear   MAM 02-DEC-2023
DEFINITION  protein CEBPZOS isoform X2 [Dama dama].
ACCESSION   XP_061011586
VERSION     XP_061011586.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155603.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..80
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..80
                     /product="protein CEBPZOS isoform X2"
                     /calculated_mol_wt=9277
     CDS             1..80
                     /gene="CEBPZOS"
                     /coded_by="XM_061155603.1:146..388"
                     /db_xref="GeneID:133065008"
ORIGIN      
        1 msrsmdplak kifkgvlvae lmgvfgayfl fnkmntsqdf rhtmskkfpf ilevyyksie
       61 hsgmygireq dqekwlsskn
//
LOCUS       XP_061011587              80 aa            linear   MAM 02-DEC-2023
DEFINITION  protein CEBPZOS isoform X2 [Dama dama].
ACCESSION   XP_061011587
VERSION     XP_061011587.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155604.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..80
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..80
                     /product="protein CEBPZOS isoform X2"
                     /calculated_mol_wt=9277
     CDS             1..80
                     /gene="CEBPZOS"
                     /coded_by="XM_061155604.1:136..378"
                     /db_xref="GeneID:133065008"
ORIGIN      
        1 msrsmdplak kifkgvlvae lmgvfgayfl fnkmntsqdf rhtmskkfpf ilevyyksie
       61 hsgmygireq dqekwlsskn
//
LOCUS       XP_061011588              80 aa            linear   MAM 02-DEC-2023
DEFINITION  protein CEBPZOS isoform X2 [Dama dama].
ACCESSION   XP_061011588
VERSION     XP_061011588.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155605.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..80
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..80
                     /product="protein CEBPZOS isoform X2"
                     /calculated_mol_wt=9277
     CDS             1..80
                     /gene="CEBPZOS"
                     /coded_by="XM_061155605.1:292..534"
                     /db_xref="GeneID:133065008"
ORIGIN      
        1 msrsmdplak kifkgvlvae lmgvfgayfl fnkmntsqdf rhtmskkfpf ilevyyksie
       61 hsgmygireq dqekwlsskn
//
LOCUS       XP_061011589             780 aa            linear   MAM 02-DEC-2023
DEFINITION  striatin [Dama dama].
ACCESSION   XP_061011589
VERSION     XP_061011589.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155606.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..780
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..780
                     /product="striatin"
                     /calculated_mol_wt=85831
     Region          49..173
                     /region_name="Striatin"
                     /note="Striatin family; pfam08232"
                     /db_xref="CDD:462401"
     Region          455..779
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(462,480,484,490..491,514..515,533,537,543..544,
                     567..568,585,590,596..597,616,633,642..643,655..656,681,
                     685,691..692,704..705,722,727,733..734,746..747,769,773,
                     779)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          468..514
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          520..567
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          572..609
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          618..658
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          667..703
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          709..745
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          755..779
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..780
                     /gene="STRN"
                     /coded_by="XM_061155606.1:107..2449"
                     /db_xref="GeneID:133065011"
ORIGIN      
        1 mdeqagpgvf fsnnhpaagg akglgplaea aaagdgaaaa gaaraqyslp gilhflqhew
       61 arfeveraqw everaelqaq iaflqgerkg qenlkkdlvr rikmleyalk qerakyhklk
      121 ygtelnqgdm kppsydsdeg netevqpqqn sqlmwkqgrq llrqylqevg ytdtildvks
      181 krvrallgis sdvtdreddk nqdsvingte aevketamig kseltdsasv ldnfkflesa
      241 aadfsdeded ddidgreksi idtstivrkk vlpdssedrd tkealkefdf lvtseegdsd
      301 srsagdgtdw ekedqclmpe awnvdqgvit klkeqykker kgkkgvkrpn rsklqdmlan
      361 lrdvdelpsl qpsvgspsrp sssrlpehei nradevealt fppssgksfi mgadealese
      421 lglgelaglt vaneadslty diannkdalr ktwnpkftlr shfdgirala fhptepvlit
      481 asedhtlkmw nlqktapakk stsldvepiy tfrahkgpvl cvvmsssgeq cysggadgli
      541 qswstanpnv dpydsydpsv lrgpllghtd avwglaysaa hqrllscsad gtlrlwnate
      601 vapalsvfsd nqelgvpasv dlvssdpshm vasfskgyts ifnmetqqri ltlesnldst
      661 assscqinrv ishptlpisi tahedrhikf ydnntgklih smvahleavt slavdpngly
      721 lmsgshdcsi rlwnlesktc iqeftahrkk feesihdvaf hpskcyiasa gadalakvfv
//
LOCUS       XP_061011590            1035 aa            linear   MAM 02-DEC-2023
DEFINITION  cysteine-rich motor neuron 1 protein isoform X1 [Dama dama].
ACCESSION   XP_061011590
VERSION     XP_061011590.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155607.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1035
                     /product="cysteine-rich motor neuron 1 protein isoform X1"
                     /calculated_mol_wt=113702
     Region          39..90
                     /region_name="IGFBP"
                     /note="Insulin-like growth factor binding protein;
                     pfam00219"
                     /db_xref="CDD:459717"
     Region          336..390
                     /region_name="VWC"
                     /note="von Willebrand factor (vWF) type C domain;
                     smart00214"
                     /db_xref="CDD:214564"
     Region          403..456
                     /region_name="VWC"
                     /note="von Willebrand factor (vWF) type C domain;
                     smart00214"
                     /db_xref="CDD:214564"
     Region          509..532
                     /region_name="Antistasin"
                     /note="Antistasin family; pfam02822"
                     /db_xref="CDD:460713"
     Region          539..564
                     /region_name="Antistasin"
                     /note="Antistasin family; pfam02822"
                     /db_xref="CDD:460713"
     Region          567..592
                     /region_name="Antistasin"
                     /note="Antistasin family; pfam02822"
                     /db_xref="CDD:460713"
     Region          683..734
                     /region_name="VWC"
                     /note="von Willebrand factor type C domain; cl17735"
                     /db_xref="CDD:450195"
     Region          758..808
                     /region_name="VWC"
                     /note="von Willebrand factor type C domain; cl17735"
                     /db_xref="CDD:450195"
     Region          819..873
                     /region_name="VWC"
                     /note="von Willebrand factor type C domain; cl17735"
                     /db_xref="CDD:450195"
     Region          906..1035
                     /region_name="CRIM1_C"
                     /note="Cysteine-rich motor neuron 1 protein C-terminal;
                     pfam19442"
                     /db_xref="CDD:437274"
     CDS             1..1035
                     /gene="CRIM1"
                     /coded_by="XM_061155607.1:16..3123"
                     /db_xref="GeneID:133065012"
ORIGIN      
        1 mylvaggrgl agcghllvsl lglllllars gtralvclpc deskceepks cpgsivqgfc
       61 gccymcarqr nescggaygl hgacdrglrc virpplngds iteyevgvce denwdddqll
      121 gfepcnenlv sgcnlingkc ecdtirtcnn pfefprkdmc lsalkrieee kpdcskarce
      181 vqfsprcped svliegyapp geccplpsrc vcdpagclrk vcqpgylnil vskasgkpge
      241 ccdlyeckpv fsvdcstvec psfqqtvcpl dsyetqvrlt adgcctlptr ceclsglcgf
      301 pvcevgstpr ivsrgdgtpg kccdvfecvn etkpacvfnn veysdgdmfr mdncrfcrcq
      361 ggvsicftaq cgelsceryy mpegeccpvc edpvyplnnp agcyangqih ahgdrwredd
      421 ctfcqcinge phcvatacgq scmnpvkvpg eccpvceept yitidppacg elsnctltek
      481 dciygfkldh ngcrtcqckn reelcmglkr gctlncpfgf ltdaygceic qcrprprkcr
      541 pvvcekhcpf gylknkhgcd icrckkcpel rcskicslgf qkdshgclic kckevsasag
      601 ppvlsgtcls mdghhhknee swhdgcrecy chsgremcal itcpvpacgn ptihpgrccp
      661 scsddfevqk pelstpsvch apggeyfveg etwhidactq cachggrvlc etevcppllc
      721 qdpartqdsc cpqcpdeplq pssshndsvp syckndegdi flaaeswkpd vctscvcmds
      781 viscysescp svscerpvlr kgqccpycie dtipkkvvch fsgkayadee rwdidscthc
      841 yclqgqtlcs tvscpplpcv epinvegscc pmcpemyvpe ptnvpiektn hreidmevpl
      901 wptpsendii hlprdmghpq idyrdntrln sedasvdsia svvvpivigl siiiaflfin
      961 qkkqwipllc wyrtptkpss lnnqlvsvdc kkgtrvqvdg sqrmlriaep darfsgfysm
     1021 qkqnhlqadn fyqtv
//
LOCUS       XP_061011591             954 aa            linear   MAM 02-DEC-2023
DEFINITION  cysteine-rich motor neuron 1 protein isoform X2 [Dama dama].
ACCESSION   XP_061011591
VERSION     XP_061011591.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155608.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..954
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..954
                     /product="cysteine-rich motor neuron 1 protein isoform X2"
                     /calculated_mol_wt=104952
     Region          39..90
                     /region_name="IGFBP"
                     /note="Insulin-like growth factor binding protein;
                     pfam00219"
                     /db_xref="CDD:459717"
     Region          255..309
                     /region_name="VWC"
                     /note="von Willebrand factor (vWF) type C domain;
                     smart00214"
                     /db_xref="CDD:214564"
     Region          322..375
                     /region_name="VWC"
                     /note="von Willebrand factor (vWF) type C domain;
                     smart00214"
                     /db_xref="CDD:214564"
     Region          428..451
                     /region_name="Antistasin"
                     /note="Antistasin family; pfam02822"
                     /db_xref="CDD:460713"
     Region          458..483
                     /region_name="Antistasin"
                     /note="Antistasin family; pfam02822"
                     /db_xref="CDD:460713"
     Region          486..511
                     /region_name="Antistasin"
                     /note="Antistasin family; pfam02822"
                     /db_xref="CDD:460713"
     Region          602..653
                     /region_name="VWC"
                     /note="von Willebrand factor type C domain; cl17735"
                     /db_xref="CDD:450195"
     Region          677..727
                     /region_name="VWC"
                     /note="von Willebrand factor type C domain; cl17735"
                     /db_xref="CDD:450195"
     Region          738..792
                     /region_name="VWC"
                     /note="von Willebrand factor type C domain; cl17735"
                     /db_xref="CDD:450195"
     Region          825..954
                     /region_name="CRIM1_C"
                     /note="Cysteine-rich motor neuron 1 protein C-terminal;
                     pfam19442"
                     /db_xref="CDD:437274"
     CDS             1..954
                     /gene="CRIM1"
                     /coded_by="XM_061155608.1:16..2880"
                     /db_xref="GeneID:133065012"
ORIGIN      
        1 mylvaggrgl agcghllvsl lglllllars gtralvclpc deskceepks cpgsivqgfc
       61 gccymcarqr nescggaygl hgacdrglrc virpplngds iteyevgvce denwdddqll
      121 gfepcnenlv sgcnlingkc ecdtirtcnn pfefprkdmc lsalkrievf svdcstvecp
      181 sfqqtvcpld syetqvrlta dgcctlptrc eclsglcgfp vcevgstpri vsrgdgtpgk
      241 ccdvfecvne tkpacvfnnv eysdgdmfrm dncrfcrcqg gvsicftaqc gelsceryym
      301 pegeccpvce dpvyplnnpa gcyangqiha hgdrwreddc tfcqcingep hcvatacgqs
      361 cmnpvkvpge ccpvceepty itidppacge lsnctltekd ciygfkldhn gcrtcqcknr
      421 eelcmglkrg ctlncpfgfl tdaygceicq crprprkcrp vvcekhcpfg ylknkhgcdi
      481 crckkcpelr cskicslgfq kdshgclick ckevsasagp pvlsgtclsm dghhhknees
      541 whdgcrecyc hsgremcali tcpvpacgnp tihpgrccps csddfevqkp elstpsvcha
      601 pggeyfvege twhidactqc achggrvlce tevcppllcq dpartqdscc pqcpdeplqp
      661 ssshndsvps yckndegdif laaeswkpdv ctscvcmdsv iscysescps vscerpvlrk
      721 gqccpycied tipkkvvchf sgkayadeer wdidscthcy clqgqtlcst vscpplpcve
      781 pinvegsccp mcpemyvpep tnvpiektnh reidmevplw ptpsendiih lprdmghpqi
      841 dyrdntrlns edasvdsias vvvpivigls iiiaflfinq kkqwipllcw yrtptkpssl
      901 nnqlvsvdck kgtrvqvdgs qrmlriaepd arfsgfysmq kqnhlqadnf yqtv
//
LOCUS       XP_061011592             376 aa            linear   MAM 02-DEC-2023
DEFINITION  fasciculation and elongation protein zeta-2 isoform X1 [Dama dama].
ACCESSION   XP_061011592
VERSION     XP_061011592.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155609.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..376
                     /product="fasciculation and elongation protein zeta-2
                     isoform X1"
                     /calculated_mol_wt=42123
     Region          46..266
                     /region_name="FEZ"
                     /note="FEZ-like protein; pfam07763"
                     /db_xref="CDD:462257"
     CDS             1..376
                     /gene="FEZ2"
                     /coded_by="XM_061155609.1:26..1156"
                     /db_xref="GeneID:133065013"
ORIGIN      
        1 maadgdwqdf yefqeparsl qdqencnasp eaaaapgggg dgfpalachl eeklslcfrp
       61 sgpgaeppra avrpitersl lqgdeiwnal tdnygnvmpv dwksshtrtl hlltlnlsek
      121 gmsdsllfdt sddeelreql dmhsiivscv sdeplftadq vieeieemmq espdpeddet
      181 ptqsdrlsml sqeiqtlkrs stssyeervk rlsvselnel leeietaike yseelvqqla
      241 lrdelefeke vknsfisvli evqnkqkehk etakkkkklk ngssqngkne rshmpgtrfs
      301 megisnviqn glrhtfgnsg gekqylttvi pyekkngpps vedlqiltki lramkedsek
      361 vpslltdyil kvlcpt
//
LOCUS       XP_061011593             349 aa            linear   MAM 02-DEC-2023
DEFINITION  fasciculation and elongation protein zeta-2 isoform X2 [Dama dama].
ACCESSION   XP_061011593
VERSION     XP_061011593.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155610.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..349
                     /product="fasciculation and elongation protein zeta-2
                     isoform X2"
                     /calculated_mol_wt=39177
     Region          46..266
                     /region_name="FEZ"
                     /note="FEZ-like protein; pfam07763"
                     /db_xref="CDD:462257"
     CDS             1..349
                     /gene="FEZ2"
                     /coded_by="XM_061155610.1:26..1075"
                     /db_xref="GeneID:133065013"
ORIGIN      
        1 maadgdwqdf yefqeparsl qdqencnasp eaaaapgggg dgfpalachl eeklslcfrp
       61 sgpgaeppra avrpitersl lqgdeiwnal tdnygnvmpv dwksshtrtl hlltlnlsek
      121 gmsdsllfdt sddeelreql dmhsiivscv sdeplftadq vieeieemmq espdpeddet
      181 ptqsdrlsml sqeiqtlkrs stssyeervk rlsvselnel leeietaike yseelvqqla
      241 lrdelefeke vknsfisvli evqnkqkehk etakkkkklk ngssqngkne rshmpgtylt
      301 tvipyekkng ppsvedlqil tkilramked sekvpslltd yilkvlcpt
//
LOCUS       XP_061011594             518 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM98A [Dama dama].
ACCESSION   XP_061011594
VERSION     XP_061011594.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155611.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..518
                     /product="protein FAM98A"
                     /calculated_mol_wt=55126
     Region          28..327
                     /region_name="DUF2465"
                     /note="Protein of unknown function (DUF2465); pfam10239"
                     /db_xref="CDD:463016"
     CDS             1..518
                     /gene="FAM98A"
                     /coded_by="XM_061155611.1:107..1663"
                     /db_xref="GeneID:133065015"
ORIGIN      
        1 mecdlmetdi lesledlgyk gplledgals qavtagassp eftklcawlv selrvlckle
       61 envqatnsps eaeefqlevs gllgemncpy lsltsgdvtk rlliqkncll lltylisele
      121 aarmlcvntl pkkaqegggs evfqelkgic ialgmskppa nitmfqffsg iekklketla
      181 kvppnhvgkp llkkpmgpah wekieainqa vaneyevrrk llikrldvtv qsfgwsdrak
      241 sqteklakvy qpkrsvlspk stisvahlla arqdlskilr tssgsirekt acainkvlmg
      301 rvpdrggrpn eieppppemp pwqkrqdgpq qpaggrgggr ggyehssygg rggheqqggg
      361 rggrgggydh ggrgggrgnk hqggwtdggs gggggyqdgg yrdagfqagg yhgghsggyq
      421 gggyggfqts tytgsgyqgg gyqqdnryqd gghhgdrgsg rggrggrggr ggragqgggw
      481 ggrgsqnyhq ggqfeqhfqh ggyqynhsgf gqgrhyts
//
LOCUS       XP_061011595             615 aa            linear   MAM 02-DEC-2023
DEFINITION  ras guanyl-releasing protein 3 isoform X1 [Dama dama].
ACCESSION   XP_061011595
VERSION     XP_061011595.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155612.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..615
                     /product="ras guanyl-releasing protein 3 isoform X1"
                     /calculated_mol_wt=69420
     Region          <1..49
                     /region_name="REM"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     GTPases; N-terminal domain (RasGef_N), also called REM
                     domain (Ras exchanger motif). This domain is common in
                     nucleotide exchange factors for Ras-like small GTPases and
                     is typically found immediately...; cl02520"
                     /db_xref="CDD:470601"
     Region          71..307
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases; smart00147"
                     /db_xref="CDD:214539"
     Site            order(104..106,114..115,117..119,121..122,125..126,129,
                     162,165..166,168..170,172..175,177..178,198,201,206..208,
                     211,224..226,229..231,233..235,237..240,255,259,294,
                     297..298)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     Region          <326..401
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     Region          411..469
                     /region_name="C1_RASGRP3"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in RAS guanyl-releasing protein 3 (RASGRP3) and
                     similar proteins; cd20862"
                     /db_xref="CDD:410412"
     Site            order(423..429,437..441,444)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410412"
     CDS             1..615
                     /gene="RASGRP3"
                     /coded_by="XM_061155612.1:767..2614"
                     /db_xref="GeneID:133065016"
ORIGIN      
        1 mrywivkfpa efnldlglir mteefrevas qlgyekhtsl idissipsyd wmrrvtqrkk
       61 vskkgkacll fdhlepiela ehltflehks frrisftdyq syvihgclen nptlersial
      121 fngiskwvql mvlskptpqq raevitkfin vakkllqlkn fntlmavvgg lshssisrlk
      181 ethshlssev tknwnemtel vssngnycny rkafadcdgf kipilgvhlk dliavhvifp
      241 dwteenkvni vkmhqlsvtl selvslqnas hhlepnldli nlltlsldly hteddiykls
      301 lvleprnsks qptspttptk pvvplewasg vmpkpdptvi nkhirklves vfrnydhdhd
      361 gyisqedfes iaanfpflds fcvldkdqdg liskdemmay flraksqlhc kmgpgfvhnf
      421 qemtylkptf cehcagflwg iikqgykckd cganchkqck dllvlacrrf arapslgssh
      481 gslpgspslp pvqdevfefp gvtaghrdld sraitlvtgs sgkisvrlqr attsqatqte
      541 pvwseagwgd sgshtfpkmk skfhdkaakd kgfakwenek prvqagvdvv drgttfepdq
      601 deadmdetkq dgedg
//
LOCUS       XP_061011596             615 aa            linear   MAM 02-DEC-2023
DEFINITION  ras guanyl-releasing protein 3 isoform X1 [Dama dama].
ACCESSION   XP_061011596
VERSION     XP_061011596.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155613.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..615
                     /product="ras guanyl-releasing protein 3 isoform X1"
                     /calculated_mol_wt=69420
     Region          <1..49
                     /region_name="REM"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     GTPases; N-terminal domain (RasGef_N), also called REM
                     domain (Ras exchanger motif). This domain is common in
                     nucleotide exchange factors for Ras-like small GTPases and
                     is typically found immediately...; cl02520"
                     /db_xref="CDD:470601"
     Region          71..307
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases; smart00147"
                     /db_xref="CDD:214539"
     Site            order(104..106,114..115,117..119,121..122,125..126,129,
                     162,165..166,168..170,172..175,177..178,198,201,206..208,
                     211,224..226,229..231,233..235,237..240,255,259,294,
                     297..298)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     Region          <326..401
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     Region          411..469
                     /region_name="C1_RASGRP3"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in RAS guanyl-releasing protein 3 (RASGRP3) and
                     similar proteins; cd20862"
                     /db_xref="CDD:410412"
     Site            order(423..429,437..441,444)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410412"
     CDS             1..615
                     /gene="RASGRP3"
                     /coded_by="XM_061155613.1:695..2542"
                     /db_xref="GeneID:133065016"
ORIGIN      
        1 mrywivkfpa efnldlglir mteefrevas qlgyekhtsl idissipsyd wmrrvtqrkk
       61 vskkgkacll fdhlepiela ehltflehks frrisftdyq syvihgclen nptlersial
      121 fngiskwvql mvlskptpqq raevitkfin vakkllqlkn fntlmavvgg lshssisrlk
      181 ethshlssev tknwnemtel vssngnycny rkafadcdgf kipilgvhlk dliavhvifp
      241 dwteenkvni vkmhqlsvtl selvslqnas hhlepnldli nlltlsldly hteddiykls
      301 lvleprnsks qptspttptk pvvplewasg vmpkpdptvi nkhirklves vfrnydhdhd
      361 gyisqedfes iaanfpflds fcvldkdqdg liskdemmay flraksqlhc kmgpgfvhnf
      421 qemtylkptf cehcagflwg iikqgykckd cganchkqck dllvlacrrf arapslgssh
      481 gslpgspslp pvqdevfefp gvtaghrdld sraitlvtgs sgkisvrlqr attsqatqte
      541 pvwseagwgd sgshtfpkmk skfhdkaakd kgfakwenek prvqagvdvv drgttfepdq
      601 deadmdetkq dgedg
//
LOCUS       XP_061011597             615 aa            linear   MAM 02-DEC-2023
DEFINITION  ras guanyl-releasing protein 3 isoform X1 [Dama dama].
ACCESSION   XP_061011597
VERSION     XP_061011597.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155614.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..615
                     /product="ras guanyl-releasing protein 3 isoform X1"
                     /calculated_mol_wt=69420
     Region          <1..49
                     /region_name="REM"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     GTPases; N-terminal domain (RasGef_N), also called REM
                     domain (Ras exchanger motif). This domain is common in
                     nucleotide exchange factors for Ras-like small GTPases and
                     is typically found immediately...; cl02520"
                     /db_xref="CDD:470601"
     Region          71..307
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases; smart00147"
                     /db_xref="CDD:214539"
     Site            order(104..106,114..115,117..119,121..122,125..126,129,
                     162,165..166,168..170,172..175,177..178,198,201,206..208,
                     211,224..226,229..231,233..235,237..240,255,259,294,
                     297..298)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     Region          <326..401
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     Region          411..469
                     /region_name="C1_RASGRP3"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in RAS guanyl-releasing protein 3 (RASGRP3) and
                     similar proteins; cd20862"
                     /db_xref="CDD:410412"
     Site            order(423..429,437..441,444)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410412"
     CDS             1..615
                     /gene="RASGRP3"
                     /coded_by="XM_061155614.1:590..2437"
                     /db_xref="GeneID:133065016"
ORIGIN      
        1 mrywivkfpa efnldlglir mteefrevas qlgyekhtsl idissipsyd wmrrvtqrkk
       61 vskkgkacll fdhlepiela ehltflehks frrisftdyq syvihgclen nptlersial
      121 fngiskwvql mvlskptpqq raevitkfin vakkllqlkn fntlmavvgg lshssisrlk
      181 ethshlssev tknwnemtel vssngnycny rkafadcdgf kipilgvhlk dliavhvifp
      241 dwteenkvni vkmhqlsvtl selvslqnas hhlepnldli nlltlsldly hteddiykls
      301 lvleprnsks qptspttptk pvvplewasg vmpkpdptvi nkhirklves vfrnydhdhd
      361 gyisqedfes iaanfpflds fcvldkdqdg liskdemmay flraksqlhc kmgpgfvhnf
      421 qemtylkptf cehcagflwg iikqgykckd cganchkqck dllvlacrrf arapslgssh
      481 gslpgspslp pvqdevfefp gvtaghrdld sraitlvtgs sgkisvrlqr attsqatqte
      541 pvwseagwgd sgshtfpkmk skfhdkaakd kgfakwenek prvqagvdvv drgttfepdq
      601 deadmdetkq dgedg
//
LOCUS       XP_061011598             615 aa            linear   MAM 02-DEC-2023
DEFINITION  ras guanyl-releasing protein 3 isoform X1 [Dama dama].
ACCESSION   XP_061011598
VERSION     XP_061011598.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155615.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..615
                     /product="ras guanyl-releasing protein 3 isoform X1"
                     /calculated_mol_wt=69420
     Region          <1..49
                     /region_name="REM"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     GTPases; N-terminal domain (RasGef_N), also called REM
                     domain (Ras exchanger motif). This domain is common in
                     nucleotide exchange factors for Ras-like small GTPases and
                     is typically found immediately...; cl02520"
                     /db_xref="CDD:470601"
     Region          71..307
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases; smart00147"
                     /db_xref="CDD:214539"
     Site            order(104..106,114..115,117..119,121..122,125..126,129,
                     162,165..166,168..170,172..175,177..178,198,201,206..208,
                     211,224..226,229..231,233..235,237..240,255,259,294,
                     297..298)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     Region          <326..401
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     Region          411..469
                     /region_name="C1_RASGRP3"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in RAS guanyl-releasing protein 3 (RASGRP3) and
                     similar proteins; cd20862"
                     /db_xref="CDD:410412"
     Site            order(423..429,437..441,444)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410412"
     CDS             1..615
                     /gene="RASGRP3"
                     /coded_by="XM_061155615.1:504..2351"
                     /db_xref="GeneID:133065016"
ORIGIN      
        1 mrywivkfpa efnldlglir mteefrevas qlgyekhtsl idissipsyd wmrrvtqrkk
       61 vskkgkacll fdhlepiela ehltflehks frrisftdyq syvihgclen nptlersial
      121 fngiskwvql mvlskptpqq raevitkfin vakkllqlkn fntlmavvgg lshssisrlk
      181 ethshlssev tknwnemtel vssngnycny rkafadcdgf kipilgvhlk dliavhvifp
      241 dwteenkvni vkmhqlsvtl selvslqnas hhlepnldli nlltlsldly hteddiykls
      301 lvleprnsks qptspttptk pvvplewasg vmpkpdptvi nkhirklves vfrnydhdhd
      361 gyisqedfes iaanfpflds fcvldkdqdg liskdemmay flraksqlhc kmgpgfvhnf
      421 qemtylkptf cehcagflwg iikqgykckd cganchkqck dllvlacrrf arapslgssh
      481 gslpgspslp pvqdevfefp gvtaghrdld sraitlvtgs sgkisvrlqr attsqatqte
      541 pvwseagwgd sgshtfpkmk skfhdkaakd kgfakwenek prvqagvdvv drgttfepdq
      601 deadmdetkq dgedg
//
LOCUS       XP_061011599             615 aa            linear   MAM 02-DEC-2023
DEFINITION  ras guanyl-releasing protein 3 isoform X1 [Dama dama].
ACCESSION   XP_061011599
VERSION     XP_061011599.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155616.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..615
                     /product="ras guanyl-releasing protein 3 isoform X1"
                     /calculated_mol_wt=69420
     Region          <1..49
                     /region_name="REM"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     GTPases; N-terminal domain (RasGef_N), also called REM
                     domain (Ras exchanger motif). This domain is common in
                     nucleotide exchange factors for Ras-like small GTPases and
                     is typically found immediately...; cl02520"
                     /db_xref="CDD:470601"
     Region          71..307
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases; smart00147"
                     /db_xref="CDD:214539"
     Site            order(104..106,114..115,117..119,121..122,125..126,129,
                     162,165..166,168..170,172..175,177..178,198,201,206..208,
                     211,224..226,229..231,233..235,237..240,255,259,294,
                     297..298)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     Region          <326..401
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     Region          411..469
                     /region_name="C1_RASGRP3"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in RAS guanyl-releasing protein 3 (RASGRP3) and
                     similar proteins; cd20862"
                     /db_xref="CDD:410412"
     Site            order(423..429,437..441,444)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410412"
     CDS             1..615
                     /gene="RASGRP3"
                     /coded_by="XM_061155616.1:476..2323"
                     /db_xref="GeneID:133065016"
ORIGIN      
        1 mrywivkfpa efnldlglir mteefrevas qlgyekhtsl idissipsyd wmrrvtqrkk
       61 vskkgkacll fdhlepiela ehltflehks frrisftdyq syvihgclen nptlersial
      121 fngiskwvql mvlskptpqq raevitkfin vakkllqlkn fntlmavvgg lshssisrlk
      181 ethshlssev tknwnemtel vssngnycny rkafadcdgf kipilgvhlk dliavhvifp
      241 dwteenkvni vkmhqlsvtl selvslqnas hhlepnldli nlltlsldly hteddiykls
      301 lvleprnsks qptspttptk pvvplewasg vmpkpdptvi nkhirklves vfrnydhdhd
      361 gyisqedfes iaanfpflds fcvldkdqdg liskdemmay flraksqlhc kmgpgfvhnf
      421 qemtylkptf cehcagflwg iikqgykckd cganchkqck dllvlacrrf arapslgssh
      481 gslpgspslp pvqdevfefp gvtaghrdld sraitlvtgs sgkisvrlqr attsqatqte
      541 pvwseagwgd sgshtfpkmk skfhdkaakd kgfakwenek prvqagvdvv drgttfepdq
      601 deadmdetkq dgedg
//
LOCUS       XP_061011600             691 aa            linear   MAM 02-DEC-2023
DEFINITION  ras guanyl-releasing protein 3 isoform X2 [Dama dama].
ACCESSION   XP_061011600
VERSION     XP_061011600.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155617.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..691
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..691
                     /product="ras guanyl-releasing protein 3 isoform X2"
                     /calculated_mol_wt=78035
     Region          11..126
                     /region_name="REM"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     GTPases; N-terminal domain (RasGef_N), also called REM
                     domain (Ras exchanger motif). This domain is common in
                     nucleotide exchange factors for Ras-like small GTPases and
                     is typically found immediately...; cd06224"
                     /db_xref="CDD:100121"
     Site            order(22,72..73,76,79..80,115..116,119,126)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:100121"
     Region          148..384
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases; smart00147"
                     /db_xref="CDD:214539"
     Site            order(181..183,191..192,194..196,198..199,202..203,206,
                     239,242..243,245..247,249..252,254..255,275,278,283..285,
                     288,301..303,306..308,310..312,314..317,332,336,371,
                     374..375)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     Region          <402..477
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     Region          487..545
                     /region_name="C1_RASGRP3"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in RAS guanyl-releasing protein 3 (RASGRP3) and
                     similar proteins; cd20862"
                     /db_xref="CDD:410412"
     Site            order(499..505,513..517,520)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410412"
     CDS             1..691
                     /gene="RASGRP3"
                     /coded_by="XM_061155617.1:444..2519"
                     /db_xref="GeneID:133065016"
ORIGIN      
        1 mgssglgkaa tldellstci emfddngeln nsylprivll mhrwylsste laekllciyr
       61 nasgescdef rlkicyfmry wivkfpaefn ldlglirmte efrevasqlg yekhtslidi
      121 ssipsydwmr rvtqrkkvsk kgkacllfdh lepielaehl tflehksfrr isftdyqsyv
      181 ihgclennpt lersialfng iskwvqlmvl skptpqqrae vitkfinvak kllqlknfnt
      241 lmavvgglsh ssisrlketh shlssevtkn wnemtelvss ngnycnyrka fadcdgfkip
      301 ilgvhlkdli avhvifpdwt eenkvnivkm hqlsvtlsel vslqnashhl epnldlinll
      361 tlsldlyhte ddiyklslvl eprnskspts pttptkpvvp lewasgvmpk pdptvinkhi
      421 rklvesvfrn ydhdhdgyis qedfesiaan fpfldsfcvl dkdqdglisk demmayflra
      481 ksqlhckmgp gfvhnfqemt ylkptfcehc agflwgiikq gykckdcgan chkqckdllv
      541 lacrrfarap slgsshgslp gspslppvqd evfefpgvta ghrdldsrai tlvtgssgki
      601 svrlqratts qatqtepvws eagwgdsgsh tfpkmkskfh dkaakdkgfa kwenekprvq
      661 agvdvvdrgt tfepdqdead mdetkqdged g
//
LOCUS       XP_061011601            1710 aa            linear   MAM 02-DEC-2023
DEFINITION  latent-transforming growth factor beta-binding protein 1 isoform X1
            [Dama dama].
ACCESSION   XP_061011601
VERSION     XP_061011601.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155618.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1710
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1710
                     /product="latent-transforming growth factor beta-binding
                     protein 1 isoform X1"
                     /calculated_mol_wt=185652
     Region          558..593
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          617..>647
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(617,620,634)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          679..720
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          <733..859
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          906..947
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(906,909,924)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          948..988
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(948,951,965)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          989..1022
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(989,992,1006)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1029..1069
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1029,1032,1046)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1070..1101
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1070,1073,1087)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1111..1151
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1111,1114,1128)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1152..1188
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1152,1155,1170)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1193..1234
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1193,1196,1211)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1235..1276
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1235,1238,1253)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1348..1390
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1456..>1482
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1456,1459,1473)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1524..1566
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1651..>1685
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1651,1654,1672)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..1710
                     /gene="LTBP1"
                     /coded_by="XM_061155618.1:1..5133"
                     /db_xref="GeneID:133065018"
ORIGIN      
        1 magawlrwgl llwagllass ahgrvrrity vvrpgpglaa galplggppr prtfnvalna
       61 rysrssagag apsertrrts ppggaalqgl rppppppppe parpggpggp lhpkpgghpa
      121 aapfakhgrq amrskvpqet qsgggarlqv hqkqqlqgvn vcggqcchgw skapgsqrct
      181 kpscvppcqn ggmclrpqlc vckpgtkgka cettaaqdts ppvfggqgpa aasswvppeq
      241 aakhtsskka dllprvspva qmtltlkpkp svglpqqirs qmtplssqnv mihhgqtqey
      301 vlkptyftaq kvisgeqste gsfplrfgqd hmaapfqlsn htgrikvvft psickvtctk
      361 gscqnscekg ntttliseng haadtltatn frvvichlpc mnggqcssrd kcqcppnftg
      421 klcqipvhga slpkvyqhsq qsgkalgthv vhsthtlplt mtsqqgvkvk fppnivnihv
      481 khppeasvqi hqvsrvdgpt gqkvkeaqpg qsqvpyqglp vqktqtvhss yqqviphvyp
      541 vaaktqlgrc fqetigsqcg kalpglskqe dccgtvgtsw gfhkcqkcpk kpsyhgynqm
      601 meclqgykrv nntfcqdine cqlqgvcpng eclntmgsyr ctckmgfgpd ptfsscipdt
      661 pviseekgpc yrlvssgrqc mhplsvhltr qlcccsvgka wgphcekcpl pgtaafkeic
      721 pggmgytvsg vhrrrpihhh vgkgpvfvkp kntqpvakst hppplpakee pvealtfsre
      781 qgpgavepev atvppekeip sldqektkle pgqpqlspgi stihlhpqfp vviektsppm
      841 pvevapeast ssasqviapt qvteinectv npdicgaghc inlpvrytci cydgykfsep
      901 qrkcvdidec aqdqhlcsqg rcentegsfl cicpagfmas eegtncidvd eclrpdvcge
      961 ghcvntmgaf rceycdsgyh mtpgghcedv decltpstcp deqcvnspgs yqcvpctegf
     1021 rgwngqcldv declepkict ngtcsnlegs ymcschkgys ptpdhkhckd idecqqgtmc
     1081 mngqcrntdg sfrcscgqgy qlsaakdqce didecqhhhl csngqcrnte gsfrcicdhg
     1141 yrasalgdhc edinecledk svcqggdcin tkgsyectcp dgfqlndnkg cqdineceqp
     1201 glcgphgecl ntdssfhcic eqgfsisadg rtcedidecv nnticdshgf cdntagsfrc
     1261 lcyqgfqapq dgqgcvdvne cellsgvcge afcenvegsf lcvcadesqe yspmtgqcrs
     1321 rlstdsevdq preekkecyy nlndaslcdn vlapnvtkqe ccctsgagwg dnceifpcpv
     1381 lgtaeftemc prgkgfvpse essygvdgen ykdadecllf gqeickngfc mntqpgyecy
     1441 ckqgtyydpv klqcfdidec qdpsscidgq cintegsync fcthpmvlda sekrcirpte
     1501 sheqieetdv yqdlcwehls deyvcsrplv gkqttytecc clygeawgmq calcpmkdsd
     1561 dyaqlcnipv tgrrrpygrd alvdlseqya peadpyfiqd rflnnfqelq aeecgilngc
     1621 engrcvrvqe gytcdcfdgy hldmakmtcv dvnecdelnn rmslcknakc integsykcv
     1681 clpgfvpsdk pnyctplnta lnlekdsdle
//
LOCUS       XP_061011602            1709 aa            linear   MAM 02-DEC-2023
DEFINITION  latent-transforming growth factor beta-binding protein 1 isoform X2
            [Dama dama].
ACCESSION   XP_061011602
VERSION     XP_061011602.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155619.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1709
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1709
                     /product="latent-transforming growth factor beta-binding
                     protein 1 isoform X2"
                     /calculated_mol_wt=185552
     Region          558..593
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          617..>647
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(617,620,634)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          679..720
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          905..946
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(905,908,923)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          947..987
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(947,950,964)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          988..1021
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(988,991,1005)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1028..1068
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1028,1031,1045)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1069..1100
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1069,1072,1086)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1110..1150
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1110,1113,1127)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1151..1187
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1151,1154,1169)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1192..1233
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1192,1195,1210)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1234..1275
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1234,1237,1252)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1347..1389
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1455..>1481
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1455,1458,1472)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1523..1565
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1650..>1684
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1650,1653,1671)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..1709
                     /gene="LTBP1"
                     /coded_by="XM_061155619.1:1..5130"
                     /db_xref="GeneID:133065018"
ORIGIN      
        1 magawlrwgl llwagllass ahgrvrrity vvrpgpglaa galplggppr prtfnvalna
       61 rysrssagag apsertrrts ppggaalqgl rppppppppe parpggpggp lhpkpgghpa
      121 aapfakhgrq amrskvpqet qsgggarlqv hqkqqlqgvn vcggqcchgw skapgsqrct
      181 kpscvppcqn ggmclrpqlc vckpgtkgka cettaaqdts ppvfggqgpa aasswvppeq
      241 aakhtsskka dllprvspva qmtltlkpkp svglpqqirs qmtplssqnv mihhgqtqey
      301 vlkptyftaq kvisgeqste gsfplrfgqd hmaapfqlsn htgrikvvft psickvtctk
      361 gscqnscekg ntttliseng haadtltatn frvvichlpc mnggqcssrd kcqcppnftg
      421 klcqipvhga slpkvyqhsq qsgkalgthv vhsthtlplt mtsqqgvkvk fppnivnihv
      481 khppeasvqi hqvsrvdgpt gqkvkeaqpg qsqvpyqglp vqktqtvhss yqqviphvyp
      541 vaaktqlgrc fqetigsqcg kalpglskqe dccgtvgtsw gfhkcqkcpk kpsyhgynqm
      601 meclqgykrv nntfcqdine cqlqgvcpng eclntmgsyr ctckmgfgpd ptfsscipdt
      661 pviseekgpc yrlvssgrqc mhplsvhltr qlcccsvgka wgphcekcpl pgtaafkeic
      721 pggmgytvsg vhrrrpihhh vgkgpvfvkp kntqpvakst hppplpakee pvealtfsre
      781 qgpgavepev atvppekeip sldqektkle pgqpqlspgi stihlhpqfp viektsppmp
      841 vevapeasts sasqviaptq vteinectvn pdicgaghci nlpvrytcic ydgykfsepq
      901 rkcvdideca qdqhlcsqgr centegsflc icpagfmase egtncidvde clrpdvcgeg
      961 hcvntmgafr ceycdsgyhm tpgghcedvd ecltpstcpd eqcvnspgsy qcvpctegfr
     1021 gwngqcldvd eclepkictn gtcsnlegsy mcschkgysp tpdhkhckdi decqqgtmcm
     1081 ngqcrntdgs frcscgqgyq lsaakdqced idecqhhhlc sngqcrnteg sfrcicdhgy
     1141 rasalgdhce dinecledks vcqggdcint kgsyectcpd gfqlndnkgc qdineceqpg
     1201 lcgphgecln tdssfhcice qgfsisadgr tcedidecvn nticdshgfc dntagsfrcl
     1261 cyqgfqapqd gqgcvdvnec ellsgvcgea fcenvegsfl cvcadesqey spmtgqcrsr
     1321 lstdsevdqp reekkecyyn lndaslcdnv lapnvtkqec cctsgagwgd nceifpcpvl
     1381 gtaeftemcp rgkgfvpsee ssygvdgeny kdadecllfg qeickngfcm ntqpgyecyc
     1441 kqgtyydpvk lqcfdidecq dpsscidgqc integsyncf cthpmvldas ekrcirptes
     1501 heqieetdvy qdlcwehlsd eyvcsrplvg kqttyteccc lygeawgmqc alcpmkdsdd
     1561 yaqlcnipvt grrrpygrda lvdlseqyap eadpyfiqdr flnnfqelqa eecgilngce
     1621 ngrcvrvqeg ytcdcfdgyh ldmakmtcvd vnecdelnnr mslcknakci ntegsykcvc
     1681 lpgfvpsdkp nyctplntal nlekdsdle
//
LOCUS       XP_061011603            1669 aa            linear   MAM 02-DEC-2023
DEFINITION  latent-transforming growth factor beta-binding protein 1 isoform X3
            [Dama dama].
ACCESSION   XP_061011603
VERSION     XP_061011603.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155620.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1669
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1669
                     /product="latent-transforming growth factor beta-binding
                     protein 1 isoform X3"
                     /calculated_mol_wt=181137
     Region          558..593
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          617..>647
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(617,620,634)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          679..720
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          <733..859
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          906..947
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(906,909,924)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          948..988
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(948,951,965)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          989..1022
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(989,992,1006)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1029..1060
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1029,1032,1046)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1070..1110
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1070,1073,1087)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1111..1147
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1111,1114,1129)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1152..1193
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1152,1155,1170)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1194..1235
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1194,1197,1212)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1307..1349
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1415..>1441
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1415,1418,1432)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1483..1525
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1610..>1644
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1610,1613,1631)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..1669
                     /gene="LTBP1"
                     /coded_by="XM_061155620.1:1..5010"
                     /db_xref="GeneID:133065018"
ORIGIN      
        1 magawlrwgl llwagllass ahgrvrrity vvrpgpglaa galplggppr prtfnvalna
       61 rysrssagag apsertrrts ppggaalqgl rppppppppe parpggpggp lhpkpgghpa
      121 aapfakhgrq amrskvpqet qsgggarlqv hqkqqlqgvn vcggqcchgw skapgsqrct
      181 kpscvppcqn ggmclrpqlc vckpgtkgka cettaaqdts ppvfggqgpa aasswvppeq
      241 aakhtsskka dllprvspva qmtltlkpkp svglpqqirs qmtplssqnv mihhgqtqey
      301 vlkptyftaq kvisgeqste gsfplrfgqd hmaapfqlsn htgrikvvft psickvtctk
      361 gscqnscekg ntttliseng haadtltatn frvvichlpc mnggqcssrd kcqcppnftg
      421 klcqipvhga slpkvyqhsq qsgkalgthv vhsthtlplt mtsqqgvkvk fppnivnihv
      481 khppeasvqi hqvsrvdgpt gqkvkeaqpg qsqvpyqglp vqktqtvhss yqqviphvyp
      541 vaaktqlgrc fqetigsqcg kalpglskqe dccgtvgtsw gfhkcqkcpk kpsyhgynqm
      601 meclqgykrv nntfcqdine cqlqgvcpng eclntmgsyr ctckmgfgpd ptfsscipdt
      661 pviseekgpc yrlvssgrqc mhplsvhltr qlcccsvgka wgphcekcpl pgtaafkeic
      721 pggmgytvsg vhrrrpihhh vgkgpvfvkp kntqpvakst hppplpakee pvealtfsre
      781 qgpgavepev atvppekeip sldqektkle pgqpqlspgi stihlhpqfp vviektsppm
      841 pvevapeast ssasqviapt qvteinectv npdicgaghc inlpvrytci cydgykfsep
      901 qrkcvdidec aqdqhlcsqg rcentegsfl cicpagfmas eegtncidvd eclrpdvcge
      961 ghcvntmgaf rceycdsgyh mtpgghcedv decltpstcp deqcvnspgs yqcvpctegf
     1021 rgwngqcldi decqqgtmcm ngqcrntdgs frcscgqgyq lsaakdqced idecqhhhlc
     1081 sngqcrnteg sfrcicdhgy rasalgdhce dinecledks vcqggdcint kgsyectcpd
     1141 gfqlndnkgc qdineceqpg lcgphgecln tdssfhcice qgfsisadgr tcedidecvn
     1201 nticdshgfc dntagsfrcl cyqgfqapqd gqgcvdvnec ellsgvcgea fcenvegsfl
     1261 cvcadesqey spmtgqcrsr lstdsevdqp reekkecyyn lndaslcdnv lapnvtkqec
     1321 cctsgagwgd nceifpcpvl gtaeftemcp rgkgfvpsee ssygvdgeny kdadecllfg
     1381 qeickngfcm ntqpgyecyc kqgtyydpvk lqcfdidecq dpsscidgqc integsyncf
     1441 cthpmvldas ekrcirptes heqieetdvy qdlcwehlsd eyvcsrplvg kqttyteccc
     1501 lygeawgmqc alcpmkdsdd yaqlcnipvt grrrpygrda lvdlseqyap eadpyfiqdr
     1561 flnnfqelqa eecgilngce ngrcvrvqeg ytcdcfdgyh ldmakmtcvd vnecdelnnr
     1621 mslcknakci ntegsykcvc lpgfvpsdkp nyctplntal nlekdsdle
//
LOCUS       XP_061011604            1668 aa            linear   MAM 02-DEC-2023
DEFINITION  latent-transforming growth factor beta-binding protein 1 isoform X4
            [Dama dama].
ACCESSION   XP_061011604
VERSION     XP_061011604.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155621.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1668
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1668
                     /product="latent-transforming growth factor beta-binding
                     protein 1 isoform X4"
                     /calculated_mol_wt=181137
     Region          558..593
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          617..>647
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(617,620,634)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          679..720
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          <733..859
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          906..947
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(906,909,924)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          948..988
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(948,951,965)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          989..1022
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(989,992,1006)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1029..1069
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1029,1032,1046)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1070..1101
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1070,1073,1087)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1111..1151
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1111,1114,1128)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1152..1188
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1152,1155,1170)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1193..1234
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1193,1196,1211)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1306..1348
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1414..>1440
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1414,1417,1431)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1482..1524
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1609..>1643
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1609,1612,1630)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..1668
                     /gene="LTBP1"
                     /coded_by="XM_061155621.1:1..5007"
                     /db_xref="GeneID:133065018"
ORIGIN      
        1 magawlrwgl llwagllass ahgrvrrity vvrpgpglaa galplggppr prtfnvalna
       61 rysrssagag apsertrrts ppggaalqgl rppppppppe parpggpggp lhpkpgghpa
      121 aapfakhgrq amrskvpqet qsgggarlqv hqkqqlqgvn vcggqcchgw skapgsqrct
      181 kpscvppcqn ggmclrpqlc vckpgtkgka cettaaqdts ppvfggqgpa aasswvppeq
      241 aakhtsskka dllprvspva qmtltlkpkp svglpqqirs qmtplssqnv mihhgqtqey
      301 vlkptyftaq kvisgeqste gsfplrfgqd hmaapfqlsn htgrikvvft psickvtctk
      361 gscqnscekg ntttliseng haadtltatn frvvichlpc mnggqcssrd kcqcppnftg
      421 klcqipvhga slpkvyqhsq qsgkalgthv vhsthtlplt mtsqqgvkvk fppnivnihv
      481 khppeasvqi hqvsrvdgpt gqkvkeaqpg qsqvpyqglp vqktqtvhss yqqviphvyp
      541 vaaktqlgrc fqetigsqcg kalpglskqe dccgtvgtsw gfhkcqkcpk kpsyhgynqm
      601 meclqgykrv nntfcqdine cqlqgvcpng eclntmgsyr ctckmgfgpd ptfsscipdt
      661 pviseekgpc yrlvssgrqc mhplsvhltr qlcccsvgka wgphcekcpl pgtaafkeic
      721 pggmgytvsg vhrrrpihhh vgkgpvfvkp kntqpvakst hppplpakee pvealtfsre
      781 qgpgavepev atvppekeip sldqektkle pgqpqlspgi stihlhpqfp vviektsppm
      841 pvevapeast ssasqviapt qvteinectv npdicgaghc inlpvrytci cydgykfsep
      901 qrkcvdidec aqdqhlcsqg rcentegsfl cicpagfmas eegtncidvd eclrpdvcge
      961 ghcvntmgaf rceycdsgyh mtpgghcedv decltpstcp deqcvnspgs yqcvpctegf
     1021 rgwngqcldv declepkict ngtcsnlegs ymcschkgys ptpdhkhckd idecqqgtmc
     1081 mngqcrntdg sfrcscgqgy qlsaakdqce didecqhhhl csngqcrnte gsfrcicdhg
     1141 yrasalgdhc edinecledk svcqggdcin tkgsyectcp dgfqlndnkg cqdineceqp
     1201 glcgphgecl ntdssfhcic eqgfsisadg rtcedvnece llsgvcgeaf cenvegsflc
     1261 vcadesqeys pmtgqcrsrl stdsevdqpr eekkecyynl ndaslcdnvl apnvtkqecc
     1321 ctsgagwgdn ceifpcpvlg taeftemcpr gkgfvpsees sygvdgenyk dadecllfgq
     1381 eickngfcmn tqpgyecyck qgtyydpvkl qcfdidecqd psscidgqci ntegsyncfc
     1441 thpmvldase krcirptesh eqieetdvyq dlcwehlsde yvcsrplvgk qttytecccl
     1501 ygeawgmqca lcpmkdsddy aqlcnipvtg rrrpygrdal vdlseqyape adpyfiqdrf
     1561 lnnfqelqae ecgilngcen grcvrvqegy tcdcfdgyhl dmakmtcvdv necdelnnrm
     1621 slcknakcin tegsykcvcl pgfvpsdkpn yctplntaln lekdsdle
//
LOCUS       XP_061011605            1657 aa            linear   MAM 02-DEC-2023
DEFINITION  latent-transforming growth factor beta-binding protein 1 isoform X5
            [Dama dama].
ACCESSION   XP_061011605
VERSION     XP_061011605.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155622.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1657
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1657
                     /product="latent-transforming growth factor beta-binding
                     protein 1 isoform X5"
                     /calculated_mol_wt=179952
     Region          558..593
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          617..>647
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(617,620,634)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          679..714
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          853..894
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(853,856,871)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          895..935
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(895,898,912)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          936..969
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(936,939,953)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          976..1016
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(976,979,993)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1017..1048
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1017,1020,1034)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1058..1098
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1058,1061,1075)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1099..1135
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1099,1102,1117)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1140..1181
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1140,1143,1158)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1182..1223
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1182,1185,1200)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1295..1337
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1403..>1429
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1403,1406,1420)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1471..1513
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1598..>1632
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1598,1601,1619)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..1657
                     /gene="LTBP1"
                     /coded_by="XM_061155622.1:1..4974"
                     /db_xref="GeneID:133065018"
ORIGIN      
        1 magawlrwgl llwagllass ahgrvrrity vvrpgpglaa galplggppr prtfnvalna
       61 rysrssagag apsertrrts ppggaalqgl rppppppppe parpggpggp lhpkpgghpa
      121 aapfakhgrq amrskvpqet qsgggarlqv hqkqqlqgvn vcggqcchgw skapgsqrct
      181 kpscvppcqn ggmclrpqlc vckpgtkgka cettaaqdts ppvfggqgpa aasswvppeq
      241 aakhtsskka dllprvspva qmtltlkpkp svglpqqirs qmtplssqnv mihhgqtqey
      301 vlkptyftaq kvisgeqste gsfplrfgqd hmaapfqlsn htgrikvvft psickvtctk
      361 gscqnscekg ntttliseng haadtltatn frvvichlpc mnggqcssrd kcqcppnftg
      421 klcqipvhga slpkvyqhsq qsgkalgthv vhsthtlplt mtsqqgvkvk fppnivnihv
      481 khppeasvqi hqvsrvdgpt gqkvkeaqpg qsqvpyqglp vqktqtvhss yqqviphvyp
      541 vaaktqlgrc fqetigsqcg kalpglskqe dccgtvgtsw gfhkcqkcpk kpsyhgynqm
      601 meclqgykrv nntfcqdine cqlqgvcpng eclntmgsyr ctckmgfgpd ptfsscipdt
      661 pviseekgpc yrlvssgrqc mhplsvhltr qlcccsvgka wgphcekcpl pgtakeepve
      721 altfsreqgp gavepevatv ppekeipsld qektklepgq pqlspgisti hlhpqfpvvi
      781 ektsppmpve vapeastssa sqviaptqvt einectvnpd icgaghcinl pvrytcicyd
      841 gykfsepqrk cvdidecaqd qhlcsqgrce ntegsflcic pagfmaseeg tncidvdecl
      901 rpdvcgeghc vntmgafrce ycdsgyhmtp gghcedvdec ltpstcpdeq cvnspgsyqc
      961 vpctegfrgw ngqcldvdec lepkictngt csnlegsymc schkgysptp dhkhckdide
     1021 cqqgtmcmng qcrntdgsfr cscgqgyqls aakdqcedid ecqhhhlcsn gqcrntegsf
     1081 rcicdhgyra salgdhcedi necledksvc qggdcintkg syectcpdgf qlndnkgcqd
     1141 ineceqpglc gphgeclntd ssfhciceqg fsisadgrtc edidecvnnt icdshgfcdn
     1201 tagsfrclcy qgfqapqdgq gcvdvnecel lsgvcgeafc envegsflcv cadesqeysp
     1261 mtgqcrsrls tdsevdqpre ekkecyynln daslcdnvla pnvtkqeccc tsgagwgdnc
     1321 eifpcpvlgt aeftemcprg kgfvpseess ygvdgenykd adecllfgqe ickngfcmnt
     1381 qpgyecyckq gtyydpvklq cfdidecqdp sscidgqcin tegsyncfct hpmvldasek
     1441 rcirpteshe qieetdvyqd lcwehlsdey vcsrplvgkq ttytecccly geawgmqcal
     1501 cpmkdsddya qlcnipvtgr rrpygrdalv dlseqyapea dpyfiqdrfl nnfqelqaee
     1561 cgilngceng rcvrvqegyt cdcfdgyhld makmtcvdvn ecdelnnrms lcknakcint
     1621 egsykcvclp gfvpsdkpny ctplntalnl ekdsdle
//
LOCUS       XP_061011606            1501 aa            linear   MAM 02-DEC-2023
DEFINITION  latent-transforming growth factor beta-binding protein 1 isoform X6
            [Dama dama].
ACCESSION   XP_061011606
VERSION     XP_061011606.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155623.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1501
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1501
                     /product="latent-transforming growth factor beta-binding
                     protein 1 isoform X6"
                     /calculated_mol_wt=164047
     Region          349..384
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          408..>438
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(408,411,425)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          470..511
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          <524..650
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          697..738
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(697,700,715)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          739..779
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(739,742,756)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          780..813
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(780,783,797)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          820..860
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(820,823,837)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          861..892
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(861,864,878)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          902..942
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(902,905,919)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          943..979
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(943,946,961)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          984..1025
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(984,987,1002)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1026..1067
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1026,1029,1044)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1139..1181
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1247..>1273
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1247,1250,1264)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1315..1357
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1442..>1476
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1442,1445,1463)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..1501
                     /gene="LTBP1"
                     /coded_by="XM_061155623.1:183..4688"
                     /db_xref="GeneID:133065018"
ORIGIN      
        1 mclrpqlcvc kpgtkgkace ttaaqdtspp vfggqgpaaa sswvppeqaa khtsskkadl
       61 lprvspvaqm tltlkpkpsv glpqqirsqm tplssqnvmi hhgqtqeyvl kptyftaqkv
      121 isgeqstevs nhtgrikvvf tpsickvtct kgscqnscek gntttlisen ghaadtltat
      181 nfrvvichlp cmnggqcssr dkcqcppnft gklcqipvhg aslpkvyqhs qqsgkalgth
      241 vvhsthtlpl tmtsqqgvkv kfppnivnih vkhppeasvq ihqvsrvdgp tgqkvkeaqp
      301 gqsqvpyqgl pvqktqtvhs syqqviphvy pvaaktqlgr cfqetigsqc gkalpglskq
      361 edccgtvgts wgfhkcqkcp kkpsyhgynq mmeclqgykr vnntfcqdin ecqlqgvcpn
      421 geclntmgsy rctckmgfgp dptfsscipd tpviseekgp cyrlvssgrq cmhplsvhlt
      481 rqlcccsvgk awgphcekcp lpgtaafkei cpggmgytvs gvhrrrpihh hvgkgpvfvk
      541 pkntqpvaks thppplpake epvealtfsr eqgpgavepe vatvppekei psldqektkl
      601 epgqpqlspg istihlhpqf pvviektspp mpvevapeas tssasqviap tqvteinect
      661 vnpdicgagh cinlpvrytc icydgykfse pqrkcvdide caqdqhlcsq grcentegsf
      721 lcicpagfma seegtncidv declrpdvcg eghcvntmga frceycdsgy hmtpgghced
      781 vdecltpstc pdeqcvnspg syqcvpcteg frgwngqcld vdeclepkic tngtcsnleg
      841 symcschkgy sptpdhkhck didecqqgtm cmngqcrntd gsfrcscgqg yqlsaakdqc
      901 edidecqhhh lcsngqcrnt egsfrcicdh gyrasalgdh cedinecled ksvcqggdci
      961 ntkgsyectc pdgfqlndnk gcqdineceq pglcgphgec lntdssfhci ceqgfsisad
     1021 grtcedidec vnnticdshg fcdntagsfr clcyqgfqap qdgqgcvdvn ecellsgvcg
     1081 eafcenvegs flcvcadesq eyspmtgqcr srlstdsevd qpreekkecy ynlndaslcd
     1141 nvlapnvtkq eccctsgagw gdnceifpcp vlgtaeftem cprgkgfvps eessygvdge
     1201 nykdadecll fgqeickngf cmntqpgyec yckqgtyydp vklqcfdide cqdpsscidg
     1261 qcintegsyn cfcthpmvld asekrcirpt esheqieetd vyqdlcwehl sdeyvcsrpl
     1321 vgkqttytec cclygeawgm qcalcpmkds ddyaqlcnip vtgrrrpygr dalvdlseqy
     1381 apeadpyfiq drflnnfqel qaeecgilng cengrcvrvq egytcdcfdg yhldmakmtc
     1441 vdvnecdeln nrmslcknak cintegsykc vclpgfvpsd kpnyctplnt alnlekdsdl
     1501 e
//
LOCUS       XP_061011607            1523 aa            linear   MAM 02-DEC-2023
DEFINITION  latent-transforming growth factor beta-binding protein 1 isoform X7
            [Dama dama].
ACCESSION   XP_061011607
VERSION     XP_061011607.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155624.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1523
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1523
                     /product="latent-transforming growth factor beta-binding
                     protein 1 isoform X7"
                     /calculated_mol_wt=166412
     Region          371..406
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          430..>460
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(430,433,447)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          492..533
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          <546..672
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          719..760
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(719,722,737)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          761..801
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(761,764,778)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          802..835
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(802,805,819)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          842..882
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(842,845,859)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          883..914
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(883,886,900)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          924..964
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(924,927,941)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          965..1001
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(965,968,983)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1006..1047
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1006,1009,1024)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1048..1089
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1048,1051,1066)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1161..1203
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1269..>1295
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1269,1272,1286)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1337..1379
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1464..>1498
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1464,1467,1485)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..1523
                     /gene="LTBP1"
                     /coded_by="XM_061155624.1:1..4572"
                     /db_xref="GeneID:133065018"
ORIGIN      
        1 mrskvpqetq sgggarlqvh qkqqlqgvnv cggqcchgws kapgsqrctk pscvppcqng
       61 gmclrpqlcv ckpgtkgkac ettaaqdtsp pvfggqgpaa asswvppeqa akhtsskkad
      121 llprvspvaq mtltlkpkps vglpqqirsq mtplssqnvm ihhgqtqeyv lkptyftaqk
      181 visgeqsteg sfplrfgqdh maapfqlich lpcmnggqcs srdkcqcppn ftgklcqipv
      241 hgaslpkvyq hsqqsgkalg thvvhsthtl pltmtsqqgv kvkfppnivn ihvkhppeas
      301 vqihqvsrvd gptgqkvkea qpgqsqvpyq glpvqktqtv hssyqqviph vypvaaktql
      361 grcfqetigs qcgkalpgls kqedccgtvg tswgfhkcqk cpkkpsyhgy nqmmeclqgy
      421 krvnntfcqd inecqlqgvc pngeclntmg syrctckmgf gpdptfssci pdtpviseek
      481 gpcyrlvssg rqcmhplsvh ltrqlcccsv gkawgphcek cplpgtaafk eicpggmgyt
      541 vsgvhrrrpi hhhvgkgpvf vkpkntqpva ksthppplpa keepvealtf sreqgpgave
      601 pevatvppek eipsldqekt klepgqpqls pgistihlhp qfpvviekts ppmpvevape
      661 astssasqvi aptqvteine ctvnpdicga ghcinlpvry tcicydgykf sepqrkcvdi
      721 decaqdqhlc sqgrcenteg sflcicpagf maseegtnci dvdeclrpdv cgeghcvntm
      781 gafrceycds gyhmtpgghc edvdecltps tcpdeqcvns pgsyqcvpct egfrgwngqc
      841 ldvdeclepk ictngtcsnl egsymcschk gysptpdhkh ckdidecqqg tmcmngqcrn
      901 tdgsfrcscg qgyqlsaakd qcedidecqh hhlcsngqcr ntegsfrcic dhgyrasalg
      961 dhcedinecl edksvcqggd cintkgsyec tcpdgfqlnd nkgcqdinec eqpglcgphg
     1021 eclntdssfh ciceqgfsis adgrtcedid ecvnnticds hgfcdntags frclcyqgfq
     1081 apqdgqgcvd vnecellsgv cgeafcenve gsflcvcade sqeyspmtgq crsrlstdse
     1141 vdqpreekke cyynlndasl cdnvlapnvt kqeccctsga gwgdnceifp cpvlgtaeft
     1201 emcprgkgfv pseessygvd genykdadec llfgqeickn gfcmntqpgy ecyckqgtyy
     1261 dpvklqcfdi decqdpssci dgqcintegs yncfcthpmv ldasekrcir ptesheqiee
     1321 tdvyqdlcwe hlsdeyvcsr plvgkqttyt eccclygeaw gmqcalcpmk dsddyaqlcn
     1381 ipvtgrrrpy grdalvdlse qyapeadpyf iqdrflnnfq elqaeecgil ngcengrcvr
     1441 vqegytcdcf dgyhldmakm tcvdvnecde lnnrmslckn akcintegsy kcvclpgfvp
     1501 sdkpnyctpl ntalnlekds dle
//
LOCUS       XP_061011608            1391 aa            linear   MAM 02-DEC-2023
DEFINITION  latent-transforming growth factor beta-binding protein 1 isoform X8
            [Dama dama].
ACCESSION   XP_061011608
VERSION     XP_061011608.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155625.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1391
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1391
                     /product="latent-transforming growth factor beta-binding
                     protein 1 isoform X8"
                     /calculated_mol_wt=152491
     Region          239..274
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          298..>328
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(298,301,315)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          360..401
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          <414..540
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          587..628
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(587,590,605)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          629..669
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(629,632,646)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          670..703
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(670,673,687)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          710..750
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(710,713,727)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          751..782
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(751,754,768)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          792..832
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(792,795,809)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          833..869
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(833,836,851)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          874..915
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(874,877,892)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          916..957
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(916,919,934)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1029..1071
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1137..>1163
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1137,1140,1154)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1205..1247
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1332..>1366
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1332,1335,1353)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..1391
                     /gene="LTBP1"
                     /coded_by="XM_061155625.1:167..4342"
                     /db_xref="GeneID:133065018"
ORIGIN      
        1 mdtklmcllf ffslppllvs nhtgrikvvf tpsickvtct kgscqnscek gntttlisen
       61 ghaadtltat nfrvvichlp cmnggqcssr dkcqcppnft gklcqipvhg aslpkvyqhs
      121 qqsgkalgth vvhsthtlpl tmtsqqgvkv kfppnivnih vkhppeasvq ihqvsrvdgp
      181 tgqkvkeaqp gqsqvpyqgl pvqktqtvhs syqqviphvy pvaaktqlgr cfqetigsqc
      241 gkalpglskq edccgtvgts wgfhkcqkcp kkpsyhgynq mmeclqgykr vnntfcqdin
      301 ecqlqgvcpn geclntmgsy rctckmgfgp dptfsscipd tpviseekgp cyrlvssgrq
      361 cmhplsvhlt rqlcccsvgk awgphcekcp lpgtaafkei cpggmgytvs gvhrrrpihh
      421 hvgkgpvfvk pkntqpvaks thppplpake epvealtfsr eqgpgavepe vatvppekei
      481 psldqektkl epgqpqlspg istihlhpqf pvviektspp mpvevapeas tssasqviap
      541 tqvteinect vnpdicgagh cinlpvrytc icydgykfse pqrkcvdide caqdqhlcsq
      601 grcentegsf lcicpagfma seegtncidv declrpdvcg eghcvntmga frceycdsgy
      661 hmtpgghced vdecltpstc pdeqcvnspg syqcvpcteg frgwngqcld vdeclepkic
      721 tngtcsnleg symcschkgy sptpdhkhck didecqqgtm cmngqcrntd gsfrcscgqg
      781 yqlsaakdqc edidecqhhh lcsngqcrnt egsfrcicdh gyrasalgdh cedinecled
      841 ksvcqggdci ntkgsyectc pdgfqlndnk gcqdineceq pglcgphgec lntdssfhci
      901 ceqgfsisad grtcedidec vnnticdshg fcdntagsfr clcyqgfqap qdgqgcvdvn
      961 ecellsgvcg eafcenvegs flcvcadesq eyspmtgqcr srlstdsevd qpreekkecy
     1021 ynlndaslcd nvlapnvtkq eccctsgagw gdnceifpcp vlgtaeftem cprgkgfvps
     1081 eessygvdge nykdadecll fgqeickngf cmntqpgyec yckqgtyydp vklqcfdide
     1141 cqdpsscidg qcintegsyn cfcthpmvld asekrcirpt esheqieetd vyqdlcwehl
     1201 sdeyvcsrpl vgkqttytec cclygeawgm qcalcpmkds ddyaqlcnip vtgrrrpygr
     1261 dalvdlseqy apeadpyfiq drflnnfqel qaeecgilng cengrcvrvq egytcdcfdg
     1321 yhldmakmtc vdvnecdeln nrmslcknak cintegsykc vclpgfvpsd kpnyctplnt
     1381 alnlekdsdl e
//
LOCUS       XP_061011609            1390 aa            linear   MAM 02-DEC-2023
DEFINITION  latent-transforming growth factor beta-binding protein 1 isoform X9
            [Dama dama].
ACCESSION   XP_061011609
VERSION     XP_061011609.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155626.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1390
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1390
                     /product="latent-transforming growth factor beta-binding
                     protein 1 isoform X9"
                     /calculated_mol_wt=152391
     Region          239..274
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          298..>328
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(298,301,315)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          360..401
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          586..627
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(586,589,604)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          628..668
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(628,631,645)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          669..702
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(669,672,686)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          709..749
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(709,712,726)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          750..781
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(750,753,767)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          791..831
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(791,794,808)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          832..868
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(832,835,850)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          873..914
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(873,876,891)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          915..956
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(915,918,933)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1028..1070
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1136..>1162
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1136,1139,1153)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1204..1246
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1331..>1365
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1331,1334,1352)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..1390
                     /gene="LTBP1"
                     /coded_by="XM_061155626.1:167..4339"
                     /db_xref="GeneID:133065018"
ORIGIN      
        1 mdtklmcllf ffslppllvs nhtgrikvvf tpsickvtct kgscqnscek gntttlisen
       61 ghaadtltat nfrvvichlp cmnggqcssr dkcqcppnft gklcqipvhg aslpkvyqhs
      121 qqsgkalgth vvhsthtlpl tmtsqqgvkv kfppnivnih vkhppeasvq ihqvsrvdgp
      181 tgqkvkeaqp gqsqvpyqgl pvqktqtvhs syqqviphvy pvaaktqlgr cfqetigsqc
      241 gkalpglskq edccgtvgts wgfhkcqkcp kkpsyhgynq mmeclqgykr vnntfcqdin
      301 ecqlqgvcpn geclntmgsy rctckmgfgp dptfsscipd tpviseekgp cyrlvssgrq
      361 cmhplsvhlt rqlcccsvgk awgphcekcp lpgtaafkei cpggmgytvs gvhrrrpihh
      421 hvgkgpvfvk pkntqpvaks thppplpake epvealtfsr eqgpgavepe vatvppekei
      481 psldqektkl epgqpqlspg istihlhpqf pviektsppm pvevapeast ssasqviapt
      541 qvteinectv npdicgaghc inlpvrytci cydgykfsep qrkcvdidec aqdqhlcsqg
      601 rcentegsfl cicpagfmas eegtncidvd eclrpdvcge ghcvntmgaf rceycdsgyh
      661 mtpgghcedv decltpstcp deqcvnspgs yqcvpctegf rgwngqcldv declepkict
      721 ngtcsnlegs ymcschkgys ptpdhkhckd idecqqgtmc mngqcrntdg sfrcscgqgy
      781 qlsaakdqce didecqhhhl csngqcrnte gsfrcicdhg yrasalgdhc edinecledk
      841 svcqggdcin tkgsyectcp dgfqlndnkg cqdineceqp glcgphgecl ntdssfhcic
      901 eqgfsisadg rtcedidecv nnticdshgf cdntagsfrc lcyqgfqapq dgqgcvdvne
      961 cellsgvcge afcenvegsf lcvcadesqe yspmtgqcrs rlstdsevdq preekkecyy
     1021 nlndaslcdn vlapnvtkqe ccctsgagwg dnceifpcpv lgtaeftemc prgkgfvpse
     1081 essygvdgen ykdadecllf gqeickngfc mntqpgyecy ckqgtyydpv klqcfdidec
     1141 qdpsscidgq cintegsync fcthpmvlda sekrcirpte sheqieetdv yqdlcwehls
     1201 deyvcsrplv gkqttytecc clygeawgmq calcpmkdsd dyaqlcnipv tgrrrpygrd
     1261 alvdlseqya peadpyfiqd rflnnfqelq aeecgilngc engrcvrvqe gytcdcfdgy
     1321 hldmakmtcv dvnecdelnn rmslcknakc integsykcv clpgfvpsdk pnyctplnta
     1381 lnlekdsdle
//
LOCUS       XP_061011610            1349 aa            linear   MAM 02-DEC-2023
DEFINITION  latent-transforming growth factor beta-binding protein 1 isoform
            X10 [Dama dama].
ACCESSION   XP_061011610
VERSION     XP_061011610.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155627.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1349
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1349
                     /product="latent-transforming growth factor beta-binding
                     protein 1 isoform X10"
                     /calculated_mol_wt=147976
     Region          239..274
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          298..>328
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(298,301,315)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          360..401
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          <414..540
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          587..628
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(587,590,605)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          629..669
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(629,632,646)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          670..703
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(670,673,687)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          710..750
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(710,713,727)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          751..782
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(751,754,768)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          792..832
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(792,795,809)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          833..869
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(833,836,851)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          874..915
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(874,877,892)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          987..1029
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1095..>1121
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1095,1098,1112)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1163..1205
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1290..>1324
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1290,1293,1311)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..1349
                     /gene="LTBP1"
                     /coded_by="XM_061155627.1:168..4217"
                     /db_xref="GeneID:133065018"
ORIGIN      
        1 mdtklmcllf ffslppllvs nhtgrikvvf tpsickvtct kgscqnscek gntttlisen
       61 ghaadtltat nfrvvichlp cmnggqcssr dkcqcppnft gklcqipvhg aslpkvyqhs
      121 qqsgkalgth vvhsthtlpl tmtsqqgvkv kfppnivnih vkhppeasvq ihqvsrvdgp
      181 tgqkvkeaqp gqsqvpyqgl pvqktqtvhs syqqviphvy pvaaktqlgr cfqetigsqc
      241 gkalpglskq edccgtvgts wgfhkcqkcp kkpsyhgynq mmeclqgykr vnntfcqdin
      301 ecqlqgvcpn geclntmgsy rctckmgfgp dptfsscipd tpviseekgp cyrlvssgrq
      361 cmhplsvhlt rqlcccsvgk awgphcekcp lpgtaafkei cpggmgytvs gvhrrrpihh
      421 hvgkgpvfvk pkntqpvaks thppplpake epvealtfsr eqgpgavepe vatvppekei
      481 psldqektkl epgqpqlspg istihlhpqf pvviektspp mpvevapeas tssasqviap
      541 tqvteinect vnpdicgagh cinlpvrytc icydgykfse pqrkcvdide caqdqhlcsq
      601 grcentegsf lcicpagfma seegtncidv declrpdvcg eghcvntmga frceycdsgy
      661 hmtpgghced vdecltpstc pdeqcvnspg syqcvpcteg frgwngqcld vdeclepkic
      721 tngtcsnleg symcschkgy sptpdhkhck didecqqgtm cmngqcrntd gsfrcscgqg
      781 yqlsaakdqc edidecqhhh lcsngqcrnt egsfrcicdh gyrasalgdh cedinecled
      841 ksvcqggdci ntkgsyectc pdgfqlndnk gcqdineceq pglcgphgec lntdssfhci
      901 ceqgfsisad grtcedvnec ellsgvcgea fcenvegsfl cvcadesqey spmtgqcrsr
      961 lstdsevdqp reekkecyyn lndaslcdnv lapnvtkqec cctsgagwgd nceifpcpvl
     1021 gtaeftemcp rgkgfvpsee ssygvdgeny kdadecllfg qeickngfcm ntqpgyecyc
     1081 kqgtyydpvk lqcfdidecq dpsscidgqc integsyncf cthpmvldas ekrcirptes
     1141 heqieetdvy qdlcwehlsd eyvcsrplvg kqttyteccc lygeawgmqc alcpmkdsdd
     1201 yaqlcnipvt grrrpygrda lvdlseqyap eadpyfiqdr flnnfqelqa eecgilngce
     1261 ngrcvrvqeg ytcdcfdgyh ldmakmtcvd vnecdelnnr mslcknakci ntegsykcvc
     1321 lpgfvpsdkp nyctplntal nlekdsdle
//
LOCUS       XP_061011611            1348 aa            linear   MAM 02-DEC-2023
DEFINITION  latent-transforming growth factor beta-binding protein 1 isoform
            X11 [Dama dama].
ACCESSION   XP_061011611
VERSION     XP_061011611.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155628.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1348
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1348
                     /product="latent-transforming growth factor beta-binding
                     protein 1 isoform X11"
                     /calculated_mol_wt=147877
     Region          239..274
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          298..>328
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(298,301,315)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          360..401
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          586..627
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(586,589,604)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          628..668
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(628,631,645)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          669..702
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(669,672,686)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          709..749
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(709,712,726)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          750..781
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(750,753,767)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          791..831
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(791,794,808)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          832..868
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(832,835,850)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          873..914
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(873,876,891)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          986..1028
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1094..>1120
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1094,1097,1111)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1162..1204
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1289..>1323
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1289,1292,1310)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..1348
                     /gene="LTBP1"
                     /coded_by="XM_061155628.1:168..4214"
                     /db_xref="GeneID:133065018"
ORIGIN      
        1 mdtklmcllf ffslppllvs nhtgrikvvf tpsickvtct kgscqnscek gntttlisen
       61 ghaadtltat nfrvvichlp cmnggqcssr dkcqcppnft gklcqipvhg aslpkvyqhs
      121 qqsgkalgth vvhsthtlpl tmtsqqgvkv kfppnivnih vkhppeasvq ihqvsrvdgp
      181 tgqkvkeaqp gqsqvpyqgl pvqktqtvhs syqqviphvy pvaaktqlgr cfqetigsqc
      241 gkalpglskq edccgtvgts wgfhkcqkcp kkpsyhgynq mmeclqgykr vnntfcqdin
      301 ecqlqgvcpn geclntmgsy rctckmgfgp dptfsscipd tpviseekgp cyrlvssgrq
      361 cmhplsvhlt rqlcccsvgk awgphcekcp lpgtaafkei cpggmgytvs gvhrrrpihh
      421 hvgkgpvfvk pkntqpvaks thppplpake epvealtfsr eqgpgavepe vatvppekei
      481 psldqektkl epgqpqlspg istihlhpqf pviektsppm pvevapeast ssasqviapt
      541 qvteinectv npdicgaghc inlpvrytci cydgykfsep qrkcvdidec aqdqhlcsqg
      601 rcentegsfl cicpagfmas eegtncidvd eclrpdvcge ghcvntmgaf rceycdsgyh
      661 mtpgghcedv decltpstcp deqcvnspgs yqcvpctegf rgwngqcldv declepkict
      721 ngtcsnlegs ymcschkgys ptpdhkhckd idecqqgtmc mngqcrntdg sfrcscgqgy
      781 qlsaakdqce didecqhhhl csngqcrnte gsfrcicdhg yrasalgdhc edinecledk
      841 svcqggdcin tkgsyectcp dgfqlndnkg cqdineceqp glcgphgecl ntdssfhcic
      901 eqgfsisadg rtcedvnece llsgvcgeaf cenvegsflc vcadesqeys pmtgqcrsrl
      961 stdsevdqpr eekkecyynl ndaslcdnvl apnvtkqecc ctsgagwgdn ceifpcpvlg
     1021 taeftemcpr gkgfvpsees sygvdgenyk dadecllfgq eickngfcmn tqpgyecyck
     1081 qgtyydpvkl qcfdidecqd psscidgqci ntegsyncfc thpmvldase krcirptesh
     1141 eqieetdvyq dlcwehlsde yvcsrplvgk qttytecccl ygeawgmqca lcpmkdsddy
     1201 aqlcnipvtg rrrpygrdal vdlseqyape adpyfiqdrf lnnfqelqae ecgilngcen
     1261 grcvrvqegy tcdcfdgyhl dmakmtcvdv necdelnnrm slcknakcin tegsykcvcl
     1321 pgfvpsdkpn yctplntaln lekdsdle
//
LOCUS       XP_061011612            1337 aa            linear   MAM 02-DEC-2023
DEFINITION  latent-transforming growth factor beta-binding protein 1 isoform
            X12 [Dama dama].
ACCESSION   XP_061011612
VERSION     XP_061011612.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155629.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1337
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1337
                     /product="latent-transforming growth factor beta-binding
                     protein 1 isoform X12"
                     /calculated_mol_wt=146692
     Region          239..274
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          298..>328
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(298,301,315)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          360..395
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          533..574
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(533,536,551)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          575..615
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(575,578,592)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          616..649
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(616,619,633)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          656..696
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(656,659,673)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          697..728
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(697,700,714)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          738..778
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(738,741,755)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          779..815
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(779,782,797)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          820..861
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(820,823,838)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          862..903
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(862,865,880)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          975..1017
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1083..>1109
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Region          1151..1193
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1278..>1312
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1278,1281,1299)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..1337
                     /gene="LTBP1"
                     /coded_by="XM_061155629.1:167..4180"
                     /db_xref="GeneID:133065018"
ORIGIN      
        1 mdtklmcllf ffslppllvs nhtgrikvvf tpsickvtct kgscqnscek gntttlisen
       61 ghaadtltat nfrvvichlp cmnggqcssr dkcqcppnft gklcqipvhg aslpkvyqhs
      121 qqsgkalgth vvhsthtlpl tmtsqqgvkv kfppnivnih vkhppeasvq ihqvsrvdgp
      181 tgqkvkeaqp gqsqvpyqgl pvqktqtvhs syqqviphvy pvaaktqlgr cfqetigsqc
      241 gkalpglskq edccgtvgts wgfhkcqkcp kkpsyhgynq mmeclqgykr vnntfcqdin
      301 ecqlqgvcpn geclntmgsy rctckmgfgp dptfsscipd tpviseekgp cyrlvssgrq
      361 cmhplsvhlt rqlcccsvgk awgphcekcp lpgtakeepv ealtfsreqg pgavepevat
      421 vppekeipsl dqektklepg qpqlspgist ihlhpqfpvi ektsppmpve vapeastssa
      481 sqviaptqvt einectvnpd icgaghcinl pvrytcicyd gykfsepqrk cvdidecaqd
      541 qhlcsqgrce ntegsflcic pagfmaseeg tncidvdecl rpdvcgeghc vntmgafrce
      601 ycdsgyhmtp gghcedvdec ltpstcpdeq cvnspgsyqc vpctegfrgw ngqcldvdec
      661 lepkictngt csnlegsymc schkgysptp dhkhckdide cqqgtmcmng qcrntdgsfr
      721 cscgqgyqls aakdqcedid ecqhhhlcsn gqcrntegsf rcicdhgyra salgdhcedi
      781 necledksvc qggdcintkg syectcpdgf qlndnkgcqd ineceqpglc gphgeclntd
      841 ssfhciceqg fsisadgrtc edidecvnnt icdshgfcdn tagsfrclcy qgfqapqdgq
      901 gcvdvnecel lsgvcgeafc envegsflcv cadesqeysp mtgqcrsrls tdsevdqpre
      961 ekkecyynln daslcdnvla pnvtkqeccc tsgagwgdnc eifpcpvlgt aeftemcprg
     1021 kgfvpseess ygvdgenykd adecllfgqe ickngfcmnt qpgyecyckq gtyydpvklq
     1081 cfdidecqdp sscidgqcin tegsyncfct hpmvldasek rcirpteshe qieetdvyqd
     1141 lcwehlsdey vcsrplvgkq ttytecccly geawgmqcal cpmkdsddya qlcnipvtgr
     1201 rrpygrdalv dlseqyapea dpyfiqdrfl nnfqelqaee cgilngceng rcvrvqegyt
     1261 cdcfdgyhld makmtcvdvn ecdelnnrms lcknakcint egsykcvclp gfvpsdkpny
     1321 ctplntalnl ekdsdle
//
LOCUS       XP_061011613            1296 aa            linear   MAM 02-DEC-2023
DEFINITION  latent-transforming growth factor beta-binding protein 1 isoform
            X13 [Dama dama].
ACCESSION   XP_061011613
VERSION     XP_061011613.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155630.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1296
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1296
                     /product="latent-transforming growth factor beta-binding
                     protein 1 isoform X13"
                     /calculated_mol_wt=142276
     Region          239..274
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          298..>328
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(298,301,315)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          360..395
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          534..575
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(534,537,552)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          576..616
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(576,579,593)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          617..650
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(617,620,634)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          657..697
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(657,660,674)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          698..729
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(698,701,715)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          739..779
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(739,742,756)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          780..816
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(780,783,798)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          821..862
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(821,824,839)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          934..976
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1042..>1068
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1042,1045,1059)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1110..1152
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1237..>1271
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1237,1240,1258)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..1296
                     /gene="LTBP1"
                     /coded_by="XM_061155630.1:168..4058"
                     /db_xref="GeneID:133065018"
ORIGIN      
        1 mdtklmcllf ffslppllvs nhtgrikvvf tpsickvtct kgscqnscek gntttlisen
       61 ghaadtltat nfrvvichlp cmnggqcssr dkcqcppnft gklcqipvhg aslpkvyqhs
      121 qqsgkalgth vvhsthtlpl tmtsqqgvkv kfppnivnih vkhppeasvq ihqvsrvdgp
      181 tgqkvkeaqp gqsqvpyqgl pvqktqtvhs syqqviphvy pvaaktqlgr cfqetigsqc
      241 gkalpglskq edccgtvgts wgfhkcqkcp kkpsyhgynq mmeclqgykr vnntfcqdin
      301 ecqlqgvcpn geclntmgsy rctckmgfgp dptfsscipd tpviseekgp cyrlvssgrq
      361 cmhplsvhlt rqlcccsvgk awgphcekcp lpgtakeepv ealtfsreqg pgavepevat
      421 vppekeipsl dqektklepg qpqlspgist ihlhpqfpvv iektsppmpv evapeastss
      481 asqviaptqv teinectvnp dicgaghcin lpvrytcicy dgykfsepqr kcvdidecaq
      541 dqhlcsqgrc entegsflci cpagfmasee gtncidvdec lrpdvcgegh cvntmgafrc
      601 eycdsgyhmt pgghcedvde cltpstcpde qcvnspgsyq cvpctegfrg wngqcldvde
      661 clepkictng tcsnlegsym cschkgyspt pdhkhckdid ecqqgtmcmn gqcrntdgsf
      721 rcscgqgyql saakdqcedi decqhhhlcs ngqcrntegs frcicdhgyr asalgdhced
      781 inecledksv cqggdcintk gsyectcpdg fqlndnkgcq dineceqpgl cgphgeclnt
      841 dssfhciceq gfsisadgrt cedvnecell sgvcgeafce nvegsflcvc adesqeyspm
      901 tgqcrsrlst dsevdqpree kkecyynlnd aslcdnvlap nvtkqeccct sgagwgdnce
      961 ifpcpvlgta eftemcprgk gfvpseessy gvdgenykda decllfgqei ckngfcmntq
     1021 pgyecyckqg tyydpvklqc fdidecqdps scidgqcint egsyncfcth pmvldasekr
     1081 cirptesheq ieetdvyqdl cwehlsdeyv csrplvgkqt tyteccclyg eawgmqcalc
     1141 pmkdsddyaq lcnipvtgrr rpygrdalvd lseqyapead pyfiqdrfln nfqelqaeec
     1201 gilngcengr cvrvqegytc dcfdgyhldm akmtcvdvne cdelnnrmsl cknakcinte
     1261 gsykcvclpg fvpsdkpnyc tplntalnle kdsdle
//
LOCUS       XP_061011614            1295 aa            linear   MAM 02-DEC-2023
DEFINITION  latent-transforming growth factor beta-binding protein 1 isoform
            X14 [Dama dama].
ACCESSION   XP_061011614
VERSION     XP_061011614.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155631.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1295
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1295
                     /product="latent-transforming growth factor beta-binding
                     protein 1 isoform X14"
                     /calculated_mol_wt=142177
     Region          239..274
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          298..>328
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(298,301,315)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          360..395
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          533..574
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(533,536,551)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          575..615
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(575,578,592)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          616..649
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(616,619,633)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          656..696
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(656,659,673)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          697..728
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(697,700,714)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          738..778
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(738,741,755)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          779..815
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(779,782,797)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          820..861
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(820,823,838)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          933..975
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1041..>1067
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1041,1044,1058)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1109..1151
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1236..>1270
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1236,1239,1257)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..1295
                     /gene="LTBP1"
                     /coded_by="XM_061155631.1:168..4055"
                     /db_xref="GeneID:133065018"
ORIGIN      
        1 mdtklmcllf ffslppllvs nhtgrikvvf tpsickvtct kgscqnscek gntttlisen
       61 ghaadtltat nfrvvichlp cmnggqcssr dkcqcppnft gklcqipvhg aslpkvyqhs
      121 qqsgkalgth vvhsthtlpl tmtsqqgvkv kfppnivnih vkhppeasvq ihqvsrvdgp
      181 tgqkvkeaqp gqsqvpyqgl pvqktqtvhs syqqviphvy pvaaktqlgr cfqetigsqc
      241 gkalpglskq edccgtvgts wgfhkcqkcp kkpsyhgynq mmeclqgykr vnntfcqdin
      301 ecqlqgvcpn geclntmgsy rctckmgfgp dptfsscipd tpviseekgp cyrlvssgrq
      361 cmhplsvhlt rqlcccsvgk awgphcekcp lpgtakeepv ealtfsreqg pgavepevat
      421 vppekeipsl dqektklepg qpqlspgist ihlhpqfpvi ektsppmpve vapeastssa
      481 sqviaptqvt einectvnpd icgaghcinl pvrytcicyd gykfsepqrk cvdidecaqd
      541 qhlcsqgrce ntegsflcic pagfmaseeg tncidvdecl rpdvcgeghc vntmgafrce
      601 ycdsgyhmtp gghcedvdec ltpstcpdeq cvnspgsyqc vpctegfrgw ngqcldvdec
      661 lepkictngt csnlegsymc schkgysptp dhkhckdide cqqgtmcmng qcrntdgsfr
      721 cscgqgyqls aakdqcedid ecqhhhlcsn gqcrntegsf rcicdhgyra salgdhcedi
      781 necledksvc qggdcintkg syectcpdgf qlndnkgcqd ineceqpglc gphgeclntd
      841 ssfhciceqg fsisadgrtc edvnecells gvcgeafcen vegsflcvca desqeyspmt
      901 gqcrsrlstd sevdqpreek kecyynlnda slcdnvlapn vtkqecccts gagwgdncei
      961 fpcpvlgtae ftemcprgkg fvpseessyg vdgenykdad ecllfgqeic kngfcmntqp
     1021 gyecyckqgt yydpvklqcf didecqdpss cidgqcinte gsyncfcthp mvldasekrc
     1081 irptesheqi eetdvyqdlc wehlsdeyvc srplvgkqtt yteccclyge awgmqcalcp
     1141 mkdsddyaql cnipvtgrrr pygrdalvdl seqyapeadp yfiqdrflnn fqelqaeecg
     1201 ilngcengrc vrvqegytcd cfdgyhldma kmtcvdvnec delnnrmslc knakcinteg
     1261 sykcvclpgf vpsdkpnyct plntalnlek dsdle
//
LOCUS       XP_061011615            1310 aa            linear   MAM 02-DEC-2023
DEFINITION  latent-transforming growth factor beta-binding protein 1 isoform
            X15 [Dama dama].
ACCESSION   XP_061011615
VERSION     XP_061011615.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155632.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1310
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1310
                     /product="latent-transforming growth factor beta-binding
                     protein 1 isoform X15"
                     /calculated_mol_wt=143688
     Region          158..193
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          217..>247
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(217,220,234)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          279..320
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          <333..459
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          506..547
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(506,509,524)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          548..588
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(548,551,565)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          589..622
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(589,592,606)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          629..669
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(629,632,646)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          670..701
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(670,673,687)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          711..751
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(711,714,728)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          752..788
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(752,755,770)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          793..834
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(793,796,811)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          835..876
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(835,838,853)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          948..990
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1056..>1082
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1056,1059,1073)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1124..1166
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1251..>1285
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1251,1254,1272)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..1310
                     /gene="LTBP1"
                     /coded_by="XM_061155632.1:206..4138"
                     /db_xref="GeneID:133065018"
ORIGIN      
        1 mnggqcssrd kcqcppnftg klcqipvhga slpkvyqhsq qsgkalgthv vhsthtlplt
       61 mtsqqgvkvk fppnivnihv khppeasvqi hqvsrvdgpt gqkvkeaqpg qsqvpyqglp
      121 vqktqtvhss yqqviphvyp vaaktqlgrc fqetigsqcg kalpglskqe dccgtvgtsw
      181 gfhkcqkcpk kpsyhgynqm meclqgykrv nntfcqdine cqlqgvcpng eclntmgsyr
      241 ctckmgfgpd ptfsscipdt pviseekgpc yrlvssgrqc mhplsvhltr qlcccsvgka
      301 wgphcekcpl pgtaafkeic pggmgytvsg vhrrrpihhh vgkgpvfvkp kntqpvakst
      361 hppplpakee pvealtfsre qgpgavepev atvppekeip sldqektkle pgqpqlspgi
      421 stihlhpqfp vviektsppm pvevapeast ssasqviapt qvteinectv npdicgaghc
      481 inlpvrytci cydgykfsep qrkcvdidec aqdqhlcsqg rcentegsfl cicpagfmas
      541 eegtncidvd eclrpdvcge ghcvntmgaf rceycdsgyh mtpgghcedv decltpstcp
      601 deqcvnspgs yqcvpctegf rgwngqcldv declepkict ngtcsnlegs ymcschkgys
      661 ptpdhkhckd idecqqgtmc mngqcrntdg sfrcscgqgy qlsaakdqce didecqhhhl
      721 csngqcrnte gsfrcicdhg yrasalgdhc edinecledk svcqggdcin tkgsyectcp
      781 dgfqlndnkg cqdineceqp glcgphgecl ntdssfhcic eqgfsisadg rtcedidecv
      841 nnticdshgf cdntagsfrc lcyqgfqapq dgqgcvdvne cellsgvcge afcenvegsf
      901 lcvcadesqe yspmtgqcrs rlstdsevdq preekkecyy nlndaslcdn vlapnvtkqe
      961 ccctsgagwg dnceifpcpv lgtaeftemc prgkgfvpse essygvdgen ykdadecllf
     1021 gqeickngfc mntqpgyecy ckqgtyydpv klqcfdidec qdpsscidgq cintegsync
     1081 fcthpmvlda sekrcirpte sheqieetdv yqdlcwehls deyvcsrplv gkqttytecc
     1141 clygeawgmq calcpmkdsd dyaqlcnipv tgrrrpygrd alvdlseqya peadpyfiqd
     1201 rflnnfqelq aeecgilngc engrcvrvqe gytcdcfdgy hldmakmtcv dvnecdelnn
     1261 rmslcknakc integsykcv clpgfvpsdk pnyctplnta lnlekdsdle
//
LOCUS       XP_061011616             847 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 27 isoform X1 [Dama dama].
ACCESSION   XP_061011616
VERSION     XP_061011616.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155633.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..847
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..847
                     /product="tetratricopeptide repeat protein 27 isoform X1"
                     /calculated_mol_wt=96810
     Region          505..701
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          531..559
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(532,535..536,539..540,542,566,569..570,573..574,
                     576..577,600,603..604,607..608,611)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          564..594
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          568..837
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          599..627
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          633..661
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..847
                     /gene="TTC27"
                     /coded_by="XM_061155633.1:208..2751"
                     /db_xref="GeneID:133065021"
ORIGIN      
        1 msgvmwtpel avlrgfptqa erqqwkqegv aslesgsflq lllegnykai llnsltqsil
       61 nsasiteeki dsylekqivt flddsanldk trrqqkifll gvsslqlfvq snwtgplvdl
      121 hpqdflpsvl fqqfseikgl dafvlsllvl dgesvysltt qpillllari ilvnirhklt
      181 aiqslpwwtl rcvnihqqll eerspqlfal aedcidqvmk lkdlfvddsg rclavqfhle
      241 cayiflyyye ykkakdqfsi akdicrlqid ltgalgkrtr fqenyvaqli ldvrregtvf
      301 snceftpapt pqeyltknve lnddtvlnei kladceqfqm pdlcaeelav ilgictdlqk
      361 nnpvhkltee ellaftscll sqpkfwaiqt salilrtkle rgstrrvera mrqtqaladq
      421 fedkttsvle rlkifyccqv pphwavqrql vgllfelgct ssalqifekl emwedvvicy
      481 eragqhgkae eilrkelekk etpslycllg dvlrdhsyyd qawelsrhrs araqrskgll
      541 hlrsrefkec vecfersvki npmqlgvwfs lgcaylaled yggsarafqr cvtlepdnae
      601 awnnlstsyi rlkqkvkafr tlqealkcny ehwqiwenyi ltstdvgefs eaikayhrll
      661 dlrdkykdtq vlkilvravm dgmadhsgdv atglrgklqe lfgrvtsrvt ndgeiwrlya
      721 qvygngqsdk pdenekafqy lskaykcdtq sscweknits fkevvqralg lahvaikcsk
      781 nksspqeaiq vlssvrlnlr gllskakqlf tdaasgeisr elgdeiaamd tlvtelqdls
      841 nqfrnqy
//
LOCUS       XP_061011617             813 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 27 isoform X2 [Dama dama].
ACCESSION   XP_061011617
VERSION     XP_061011617.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155634.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..813
                     /product="tetratricopeptide repeat protein 27 isoform X2"
                     /calculated_mol_wt=93062
     Region          505..701
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          531..559
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(532,535..536,539..540,542,566,569..570,573..574,
                     576..577,600,603..604,607..608,611)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          564..594
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          599..627
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          633..661
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..813
                     /gene="TTC27"
                     /coded_by="XM_061155634.1:210..2651"
                     /db_xref="GeneID:133065021"
ORIGIN      
        1 msgvmwtpel avlrgfptqa erqqwkqegv aslesgsflq lllegnykai llnsltqsil
       61 nsasiteeki dsylekqivt flddsanldk trrqqkifll gvsslqlfvq snwtgplvdl
      121 hpqdflpsvl fqqfseikgl dafvlsllvl dgesvysltt qpillllari ilvnirhklt
      181 aiqslpwwtl rcvnihqqll eerspqlfal aedcidqvmk lkdlfvddsg rclavqfhle
      241 cayiflyyye ykkakdqfsi akdicrlqid ltgalgkrtr fqenyvaqli ldvrregtvf
      301 snceftpapt pqeyltknve lnddtvlnei kladceqfqm pdlcaeelav ilgictdlqk
      361 nnpvhkltee ellaftscll sqpkfwaiqt salilrtkle rgstrrvera mrqtqaladq
      421 fedkttsvle rlkifyccqv pphwavqrql vgllfelgct ssalqifekl emwedvvicy
      481 eragqhgkae eilrkelekk etpslycllg dvlrdhsyyd qawelsrhrs araqrskgll
      541 hlrsrefkec vecfersvki npmqlgvwfs lgcaylaled yggsarafqr cvtlepdnae
      601 awnnlstsyi rlkqkvkafr tlqealkcny ehwqiwenyi ltstdvgefs eaikayhrll
      661 dlrdkykdtq vlkilvravm dgmadhsgdv atglrgklqe lfgrvtsrvt ndgeiwrlya
      721 qvygngqsdk pdenekafqy lskaykcdtq sscweknits fkevvqralg lahvaikcsk
      781 nksspqeaiq vlssvrlnlr gllskaklil thf
//
LOCUS       XP_061011618             308 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 445-like [Dama dama].
ACCESSION   XP_061011618
VERSION     XP_061011618.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155635.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..308
                     /product="zinc finger protein 445-like"
                     /calculated_mol_wt=34397
     Region          51..163
                     /region_name="SCAN"
                     /note="leucine rich region; smart00431"
                     /db_xref="CDD:128708"
     Region          228..286
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     CDS             1..308
                     /gene="LOC133065022"
                     /coded_by="XM_061155635.1:1582..2508"
                     /db_xref="GeneID:133065022"
ORIGIN      
        1 mppgrwyavh paqakasrer grlqmvkkee edesytsvpa arpqtlnrpg qelfrqlfrq
       61 lryhessgpl etlsrlrelc rwwlrpdvls kaqilellvl eqflsilpee lrtwvqlhhp
      121 esggeavall eelqrdfdet pwrdpapaqs pdvhwmgtga lraaqiwpps splrsgsalg
      181 dhlqppyeig vrdflagqpd ppaaqvpalc lkegcpgnqv taqpqgtmtf kdvevtfsqd
      241 ewglldasqr nlyrdvmlen ygnmasvvgp ftkpaliswl earepwglnv qvvqfkgnpg
      301 aapagvce
//
LOCUS       XP_061011619            4888 aa            linear   MAM 02-DEC-2023
DEFINITION  baculoviral IAP repeat-containing protein 6 isoform X1 [Dama dama].
ACCESSION   XP_061011619
VERSION     XP_061011619.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155636.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4888
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..4888
                     /product="baculoviral IAP repeat-containing protein 6
                     isoform X1"
                     /calculated_mol_wt=533141
     Region          289..359
                     /region_name="BIR"
                     /note="Inhibitor of Apoptosis domain; pfam00653"
                     /db_xref="CDD:459891"
     Site            order(317,325,327,334..336,338,342,347,351..352)
                     /site_type="active"
                     /note="peptide binding groove [active]"
                     /db_xref="CDD:237989"
     Site            order(328,331,348,355)
                     /site_type="other"
                     /note="Zn2+ binding site [ion binding]"
                     /db_xref="CDD:237989"
     Region          901..>974
                     /region_name="Nsa1_WDR74-like"
                     /note="Ribosome biogenesis protein Nsa1 and similar
                     proteins; cl45912"
                     /db_xref="CDD:459257"
     Region          3493..3648
                     /region_name="BIRC6"
                     /note="Baculoviral IAP repeat-containing protein 6;
                     pfam12356"
                     /db_xref="CDD:463547"
     Region          4603..4807
                     /region_name="UBCc_BIRC6"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic
                     (UBCc)-like domain of baculoviral IAP repeat-containing
                     protein 6 (BIRC6) and related proteins; cd23810"
                     /db_xref="CDD:467430"
     CDS             1..4888
                     /gene="BIRC6"
                     /coded_by="XM_061155636.1:61..14727"
                     /db_xref="GeneID:133065023"
ORIGIN      
        1 mvtgggaapp gtvteplpsv ivlsagrkma aaaaaasgpg cssaagagaa gvsewlvlrd
       61 gcmrcdadgl hslsyhpaln ailavtsrgt ikvidgtsga tlqasalsak pggqvkcqyi
      121 savdkvifvd dyavgcrkdl ngillldtal qtpvskqddv vqlelpvtea qqllsaclek
      181 vdvsstegyd lfitqlkdgl kntshetaan hkvakwatvt fhlphhvlks iasaivnelk
      241 kinqnvaalp vassvmdrls yllpsarpel gvgpgrsvdr slmyseanrr etftswphvg
      301 yrwaqpdpma qagfyhqpas sgddramcft csvclvcwep tdepwseher hspncpfvkg
      361 ehtqnvplsv tlatspaqfp ctdgtdrisc fgsgscphfl aaatkrgkic iwdvsklmkv
      421 hlkfeinayd paivqqlils gepnsavesr rptlawleds sscsdipkle gdsddlleds
      481 dseehsrsds vtghtsqkea mevsldital silqqpeklq weivanvled tvkdleelga
      541 npcltsskse ktkekhqeqh nipfpcllag glltykspat spissnshrs ldglsrtqge
      601 siseqgstdn esctnselns plvrrtlpil llysikesde kagkifsqmn nimskslhdd
      661 gftvpqiiem eldsqeqlll qdppvtyiqq fadaaanlts pdsekwnsvf pkpgtlvqcl
      721 rlpkfaeeen lcidsitpca dgihlliglr tcpveslsai nqvealnnln klnsalcnrr
      781 kgelesnlaa vnganisiiq hespadvqtp liiqpeqrnv sggylilykm nyatrivtle
      841 eepikiqhik dpqdtitsli llppdildnr eddyeeppee mqltskngve rgkksdistl
      901 ghlvittqgg yvkildlsnf eilakveppk kegteeqdaf vsviycsgtd rlcactkgge
      961 lhflqiggtc ddideadilv dgslskgiep ssegskplsn psspgisgvd llvdqpftvd
     1021 iltslveltr fetltprfsa tvppcwvevq qeqqqrrhpq hlhqqhhgda aqhtrtwklq
     1081 tdsnswdehv felvlpkacm vghvdfkfvl nsnitnipqi qvtllknkap glgkvnetav
     1141 drqitfplsp alnieveqng kpslvdlnee mqhmdveesq clrlcpfled hkedilcgpv
     1201 wlasgldlsg hagmltltsp klvkgmaggk yrsflihvka vnergtdeic nggirpvvrl
     1261 pslkhqsnkg cslasllakv aagkekssnv knentsgtrk senlrgcdll qevsvtirrf
     1321 kktsiskerv qrcamlqfse fhekllntlc rkaddgqite haqslvldil cwlagvhsng
     1381 pgsskegnes llsktrkcls divrvcffea grsiahkcar flalcisngk cdpcqpgfgs
     1441 vllkalldnm sflpaaatgg svywyfvlln yvkdddlagc stacasllta vsrqlqdrlt
     1501 pmeallqtry glysspfdpv lfdlemsgss cktvynssvg vqsdeidlsd vlsgngkvss
     1561 ctaaegsfts ltgllevepl hfscvstsdg trierddast ftvssfgvtp avgglssgtv
     1621 geastalssa aqvalqslsh amasaeqqlq vlqekqqqll klqqqkakle aklhqttaaa
     1681 aaaasaasav gpvhnsvpsn pvaapgffih psdvipptpk ttplfmtppl tppneavsvv
     1741 inaelaqlfp gsvidppavn laahnknsnk srmnplgsgl alaishashf lqppphqsii
     1801 iermhsgarr fvtldfgrpi lltdvliptc gdlaslsidi wtlgeevdgr rlvvatdist
     1861 hslilhdlip ppvcrfmkit vigrygstna rakiplgfyy ghtyilpwes elklmhdplr
     1921 gegesanqpe idqhlammva lqediqcryn lachrletll qsidlpplns annaqyflrk
     1981 pdkaveedsr vfsayqdciq lqlqlnlahn avqrlkvalg asrkmlsets dpkdliqtsp
     2041 teqlrtviry lldtllsllh ssnghsipav lqstfhaqac eelfkhlcis gtpkirlhtg
     2101 lllvqlcgge rwwgqflsnv lqelynseql lifpqdrvfm llscigqrsl snsgvlesll
     2161 nlldnllspl qpqlpmhrrt egvldipmis wvvmlvsrll dyvatvedea aaakkplngk
     2221 drerfmtgnq wsfinnnlht qnisrsskgs ssldrlysrk irkqlvhhkq qlnllkakqk
     2281 alveqmekek iqsnkgssyk llveqaklkq atskhfkdli rlrrtaewsr snldtevttt
     2341 kespeieplp ftlahercis vvqklvlfll smdftchadl llfvckvlar ianatrptih
     2401 lceivnepql erlllllvgt dfnrgdiswg gawaqysltc mlqdilagel lapvaaeame
     2461 egtvsddvga tagdsddslq qssvqlleti deplthdmtg applsslekd keidlellqd
     2521 lmevdidpld idlekdplaa kvfkpisstw ydywgadygt ynynpyiggl gipvakppan
     2581 aekngsqtvs vsvsqaldar levgleqqae lmlkmmstle adsilqaltn tsptlsqspt
     2641 gtddsllggl qaanqssqli vqlssvpmln vcfnklfsml qvhhvqlesl lqlwltlsln
     2701 ssssgnkeng adiflynanr ipvitlnqas itsfltvlaw ypntllrtwc lvlhsltlmt
     2761 nmqlnpgsss tigtqestah llvsdanlih vlvkflsgts phgtnqhspq vgptatqamq
     2821 efltrlqvhl sstcpqifse fllklihils tergafqtgq gpldaqvkll eftleqnfev
     2881 vsvstisavi esvtflvhhy itcsdkvmsr sgsdssvgar acfgglfanl irpgdakavc
     2941 gemtrdqlmf dllklvnilv qlplsgnrey sarvpvttnt tdsvsdeekv sggkdgngst
     3001 ssiqgppayv adlvlanqqi msqilsalgl cnssamamii gasglhltkh enfhggldai
     3061 svgdglftil ttlskrastv htmlqpilty macgymgrqg slatcqlsep llwfilrvld
     3121 tsdalkafhd mggvqlicnn mvtstraivn tarsmvstim kfldsgpnka vdstlktril
     3181 asepdnaegi hnfaplgtit sssptaqpae vllqatpphr rarsaawsyi flpeeawcdl
     3241 tihlpaavll keihiqphla slatcpssvs vevsadgvnm lplstpvvts gltyikiqlv
     3301 kaevasavcl rlhrprdast lglsqikllg ltafgttssa tvnnpflpse dqvsktsigw
     3361 lrllhhclth isdlegmmas aaaptanllq tcaallmspy cgmhspniev vlvkiglqst
     3421 riglklidil lrncaasgsd ptdlnspllf grlnglssds tidilyqlgt tqdpgtkdri
     3481 qallkwvsds arvaamkrsg rmsymcpnss sieygllmps pshlhcvaai lwhsyellve
     3541 ydlpalldre lfellfnwsm slpcnmvlkk avdsllcsmc hihpsyfsll mgwmgitppp
     3601 vqchhrlsmt ddskkqdlss sltddsknaq aplalteshl atlasssqsp eaikqlldsg
     3661 lpsllvrsla sfcfnhisys esiaqsvdts qdklrrhhvp qqcnkmpita dlvapilrfl
     3721 tevgnshimk dwlggsevnp lwtallfllc hsgstsgghn lsaqqtsars aslssaattg
     3781 lttqqrtaie natvafflqc ischpnnqkl maqvlcelfq tspqrgnlpt sgnisgfvrr
     3841 lflqlmlede kvtmflqspc plykgrinat shviqhpmfg aghkfrtlhl pvsttlsevl
     3901 drvsdtpsit akliseqkdd kekknheeke kvkaengfqd nysvvvasgl ksqskravss
     3961 tpprppsrrg rtmpdkigsa ssgadaaski itvpvfhlfh kllagqplpa emtlaqlltl
     4021 lydrklpqgy rsidltvklg srvitdpsls ktdsfkrlhp ekdhgdllgs cpddealtps
     4081 decmdgilde slletcpiqs plqvfagmgg laliaerlpm lypeviqqvs apvvtsttqe
     4141 kpkdsdqfew vtieqsgelv yeapetiaae pppiksavqt mspipahsla afglflrlpg
     4201 yaevllkerk haqcllrlvl gvtddgegsh ilqspsanvl ptlpfhvlrs lfsttplttd
     4261 dgvllrrmal eigalhlilv clsalshhap rvpnsslnqt epqvssshnp tsteeqqlyw
     4321 akgtgfgtgs tasgwdveqa ltkqrleeeh vtcllqvlas yinpasgavn geaqsshesr
     4381 gqnsnalpsv llellsqscl ipamssylrn dsvldmarhv plyrallell raiascacmv
     4441 plllplsaen geeegeqsec qtsvgtllak mktcvdtytn rlrskrenvk tgvkpdasdq
     4501 epegltllvp diqktaeivy aattslrqan qekklgeysk kvamkpkpls vlksleekyv
     4561 avmkklqfdt femvsededg klgfkvnyhy msqvknanda nsaararrla qeavtlstsl
     4621 plsssssvfv rcdeerldim kvlitgpadt pyangcfefd vyfpqdypss pplvnlettg
     4681 ghsvrfnpnl yndgkvclsi lntwhgrpee kwnpqtssfl qvlvsvqsli lvaepyfnep
     4741 gyersrgtps gtqssreydg nirqatvkwa mleqirnpsp cfkevihkhf ylkrveimaq
     4801 ceewiadvqq yssdkrvgrt mshhaaalkr htaqlreell klpcpegldp daddssemcs
     4861 atagaeetlm hdqvkpsssk elpsdfkl
//
LOCUS       XP_061011620            4882 aa            linear   MAM 02-DEC-2023
DEFINITION  baculoviral IAP repeat-containing protein 6 isoform X2 [Dama dama].
ACCESSION   XP_061011620
VERSION     XP_061011620.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155637.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4882
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..4882
                     /product="baculoviral IAP repeat-containing protein 6
                     isoform X2"
                     /calculated_mol_wt=532579
     Region          289..359
                     /region_name="BIR"
                     /note="Inhibitor of Apoptosis domain; pfam00653"
                     /db_xref="CDD:459891"
     Site            order(317,325,327,334..336,338,342,347,351..352)
                     /site_type="active"
                     /note="peptide binding groove [active]"
                     /db_xref="CDD:237989"
     Site            order(328,331,348,355)
                     /site_type="other"
                     /note="Zn2+ binding site [ion binding]"
                     /db_xref="CDD:237989"
     Region          901..>974
                     /region_name="Nsa1_WDR74-like"
                     /note="Ribosome biogenesis protein Nsa1 and similar
                     proteins; cl45912"
                     /db_xref="CDD:459257"
     Region          3487..3642
                     /region_name="BIRC6"
                     /note="Baculoviral IAP repeat-containing protein 6;
                     pfam12356"
                     /db_xref="CDD:463547"
     Region          4597..4801
                     /region_name="UBCc_BIRC6"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic
                     (UBCc)-like domain of baculoviral IAP repeat-containing
                     protein 6 (BIRC6) and related proteins; cd23810"
                     /db_xref="CDD:467430"
     CDS             1..4882
                     /gene="BIRC6"
                     /coded_by="XM_061155637.1:62..14710"
                     /db_xref="GeneID:133065023"
ORIGIN      
        1 mvtgggaapp gtvteplpsv ivlsagrkma aaaaaasgpg cssaagagaa gvsewlvlrd
       61 gcmrcdadgl hslsyhpaln ailavtsrgt ikvidgtsga tlqasalsak pggqvkcqyi
      121 savdkvifvd dyavgcrkdl ngillldtal qtpvskqddv vqlelpvtea qqllsaclek
      181 vdvsstegyd lfitqlkdgl kntshetaan hkvakwatvt fhlphhvlks iasaivnelk
      241 kinqnvaalp vassvmdrls yllpsarpel gvgpgrsvdr slmyseanrr etftswphvg
      301 yrwaqpdpma qagfyhqpas sgddramcft csvclvcwep tdepwseher hspncpfvkg
      361 ehtqnvplsv tlatspaqfp ctdgtdrisc fgsgscphfl aaatkrgkic iwdvsklmkv
      421 hlkfeinayd paivqqlils gepnsavesr rptlawleds sscsdipkle gdsddlleds
      481 dseehsrsds vtghtsqkea mevsldital silqqpeklq weivanvled tvkdleelga
      541 npcltsskse ktkekhqeqh nipfpcllag glltykspat spissnshrs ldglsrtqge
      601 siseqgstdn esctnselns plvrrtlpil llysikesde kagkifsqmn nimskslhdd
      661 gftvpqiiem eldsqeqlll qdppvtyiqq fadaaanlts pdsekwnsvf pkpgtlvqcl
      721 rlpkfaeeen lcidsitpca dgihlliglr tcpveslsai nqvealnnln klnsalcnrr
      781 kgelesnlaa vnganisiiq hespadvqtp liiqpeqrnv sggylilykm nyatrivtle
      841 eepikiqhik dpqdtitsli llppdildnr eddyeeppee mqltskngve rgkksdistl
      901 ghlvittqgg yvkildlsnf eilakveppk kegteeqdaf vsviycsgtd rlcactkgge
      961 lhflqiggtc ddideadilv dgslskgiep ssegskplsn psspgisgvd llvdqpftvd
     1021 iltslveltr fetltprfsa tvppcwvevq qeqqqrrhpq hlhqqhhgda aqhtrtwklq
     1081 tdsnswdehv felvlpkacm vghvdfkfvl nsnitnipqi qvtllknkap glgkvnetav
     1141 drqitfplsp alnieveqng kpslvdlnee mqhmdveesq clrlcpfled hkedilcgpv
     1201 wlasgldlsg hagmltltsp klvkgmaggk yrsflihvka vnergtdeic nggirpvvrl
     1261 pslkhqsnkg cslasllakv aagkekssnv knentsgtrk senlrgcdll qevsvtirrf
     1321 kktsiskerv qrcamlqfse fhekllntlc rkaddgqite haqslvldil cwlagvhsng
     1381 pgsskegnes llsktrkcls divrvcffea grsiahkcar flalcisngk cdpcqpgfgs
     1441 vllkalldnm sflpaaatgg svywyfvlln yvkdddlagc stacasllta vsrqlqdrlt
     1501 pmeallqtry glysspfdpv lfdlemsgss cktvynssvg vqsdeidlsd vlsgngkvss
     1561 ctaaegsfts ltgllevepl hfscvstsdg trierddast ftvssfgvtp avgglssgtv
     1621 geastalssa aqvalqslsh amasaeqqlq vlqekqqqll klqqqkakle aklhqttaaa
     1681 aaaasaasav gpvhnsvpsn pvaapgffih psdvipptpk ttplfmtppl tppneavsvv
     1741 inaelaqlfp gsvidppavn laahnknsnk srmnplgsgl alaishashf lqppphqsii
     1801 iermhsgarr fvtldfgrpi lltdvliptc gdlaslsidi wtlgeevdgr rlvvatdist
     1861 hslilhdlip ppvcrfmkit vigrygstna rakiplgfyy ghtyilpwes elklmhdplr
     1921 gegesanqpe idqhlammva lqediqcryn lachrletll qsidlpplns annaqyflrk
     1981 pdkaveedsr vfsayqdciq lqlqlnlahn avqrlkvalg asrkmlsets dpkdliqtsp
     2041 teqlrtviry lldtllsllh ssnvlqstfh aqaceelfkh lcisgtpkir lhtglllvql
     2101 cggerwwgqf lsnvlqelyn seqllifpqd rvfmllscig qrslsnsgvl esllnlldnl
     2161 lsplqpqlpm hrrtegvldi pmiswvvmlv srlldyvatv edeaaaakkp lngkdrerfm
     2221 tgnqwsfinn nlhtqnisrs skgsssldrl ysrkirkqlv hhkqqlnllk akqkalveqm
     2281 ekekiqsnkg ssykllveqa klkqatskhf kdlirlrrta ewsrsnldte vtttkespei
     2341 eplpftlahe rcisvvqklv lfllsmdftc hadlllfvck vlarianatr ptihlceivn
     2401 epqlerllll lvgtdfnrgd iswggawaqy sltcmlqdil agellapvaa eameegtvsd
     2461 dvgatagdsd dslqqssvql letideplth dmtgapplss lekdkeidle llqdlmevdi
     2521 dpldidlekd plaakvfkpi sstwydywga dygtynynpy igglgipvak ppanaekngs
     2581 qtvsvsvsqa ldarlevgle qqaelmlkmm stleadsilq altntsptls qsptgtddsl
     2641 lgglqaanqs sqlivqlssv pmlnvcfnkl fsmlqvhhvq lesllqlwlt lslnssssgn
     2701 kengadifly nanripvitl nqasitsflt vlawypntll rtwclvlhsl tlmtnmqlnp
     2761 gssstigtqe stahllvsda nlihvlvkfl sgtsphgtnq hspqvgptat qamqefltrl
     2821 qvhlsstcpq ifsefllkli hilstergaf qtgqgpldaq vklleftleq nfevvsvsti
     2881 saviesvtfl vhhyitcsdk vmsrsgsdss vgaracfggl fanlirpgda kavcgemtrd
     2941 qlmfdllklv nilvqlplsg nreysarvpv ttnttdsvsd eekvsggkdg ngstssiqgp
     3001 payvadlvla nqqimsqils alglcnssam amiigasglh ltkhenfhgg ldaisvgdgl
     3061 ftilttlskr astvhtmlqp iltymacgym grqgslatcq lsepllwfil rvldtsdalk
     3121 afhdmggvql icnnmvtstr aivntarsmv stimkfldsg pnkavdstlk trilasepdn
     3181 aegihnfapl gtitssspta qpaevllqat pphrrarsaa wsyiflpeea wcdltihlpa
     3241 avllkeihiq phlaslatcp ssvsvevsad gvnmlplstp vvtsgltyik iqlvkaevas
     3301 avclrlhrpr dastlglsqi kllgltafgt tssatvnnpf lpsedqvskt sigwlrllhh
     3361 clthisdleg mmasaaapta nllqtcaall mspycgmhsp nievvlvkig lqstriglkl
     3421 idillrncaa sgsdptdlns pllfgrlngl ssdstidily qlgttqdpgt kdriqallkw
     3481 vsdsarvaam krsgrmsymc pnsssieygl lmpspshlhc vaailwhsye llveydlpal
     3541 ldrelfellf nwsmslpcnm vlkkavdsll csmchihpsy fsllmgwmgi tpppvqchhr
     3601 lsmtddskkq dlsssltdds knaqaplalt eshlatlass sqspeaikql ldsglpsllv
     3661 rslasfcfnh isysesiaqs vdtsqdklrr hhvpqqcnkm pitadlvapi lrfltevgns
     3721 himkdwlggs evnplwtall fllchsgsts gghnlsaqqt sarsaslssa attglttqqr
     3781 taienatvaf flqcischpn nqklmaqvlc elfqtspqrg nlptsgnisg fvrrlflqlm
     3841 ledekvtmfl qspcplykgr inatshviqh pmfgaghkfr tlhlpvsttl sevldrvsdt
     3901 psitaklise qkddkekknh eekekvkaen gfqdnysvvv asglksqskr avsstpprpp
     3961 srrgrtmpdk igsassgada askiitvpvf hlfhkllagq plpaemtlaq lltllydrkl
     4021 pqgyrsidlt vklgsrvitd pslsktdsfk rlhpekdhgd llgscpddea ltpsdecmdg
     4081 ildeslletc piqsplqvfa gmgglaliae rlpmlypevi qqvsapvvts ttqekpkdsd
     4141 qfewvtieqs gelvyeapet iaaepppiks avqtmspipa hslaafglfl rlpgyaevll
     4201 kerkhaqcll rlvlgvtddg egshilqsps anvlptlpfh vlrslfsttp lttddgvllr
     4261 rmaleigalh lilvclsals hhaprvpnss lnqtepqvss shnptsteeq qlywakgtgf
     4321 gtgstasgwd veqaltkqrl eeehvtcllq vlasyinpas gavngeaqss hesrgqnsna
     4381 lpsvllells qsclipamss ylrndsvldm arhvplyral lellraiasc acmvplllpl
     4441 saengeeege qsecqtsvgt llakmktcvd tytnrlrskr envktgvkpd asdqepeglt
     4501 llvpdiqkta eivyaattsl rqanqekklg eyskkvamkp kplsvlksle ekyvavmkkl
     4561 qfdtfemvse dedgklgfkv nyhymsqvkn andansaara rrlaqeavtl stslplssss
     4621 svfvrcdeer ldimkvlitg padtpyangc fefdvyfpqd ypsspplvnl ettgghsvrf
     4681 npnlyndgkv clsilntwhg rpeekwnpqt ssflqvlvsv qslilvaepy fnepgyersr
     4741 gtpsgtqssr eydgnirqat vkwamleqir npspcfkevi hkhfylkrve imaqceewia
     4801 dvqqyssdkr vgrtmshhaa alkrhtaqlr eellklpcpe gldpdaddss emcsatagae
     4861 etlmhdqvkp ssskelpsdf kl
//
LOCUS       XP_061011621            4879 aa            linear   MAM 02-DEC-2023
DEFINITION  baculoviral IAP repeat-containing protein 6 isoform X3 [Dama dama].
ACCESSION   XP_061011621
VERSION     XP_061011621.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155638.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4879
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..4879
                     /product="baculoviral IAP repeat-containing protein 6
                     isoform X3"
                     /calculated_mol_wt=532020
     Region          289..359
                     /region_name="BIR"
                     /note="Inhibitor of Apoptosis domain; pfam00653"
                     /db_xref="CDD:459891"
     Site            order(317,325,327,334..336,338,342,347,351..352)
                     /site_type="active"
                     /note="peptide binding groove [active]"
                     /db_xref="CDD:237989"
     Site            order(328,331,348,355)
                     /site_type="other"
                     /note="Zn2+ binding site [ion binding]"
                     /db_xref="CDD:237989"
     Region          901..>974
                     /region_name="Nsa1_WDR74-like"
                     /note="Ribosome biogenesis protein Nsa1 and similar
                     proteins; cl45912"
                     /db_xref="CDD:459257"
     Region          3484..3639
                     /region_name="BIRC6"
                     /note="Baculoviral IAP repeat-containing protein 6;
                     pfam12356"
                     /db_xref="CDD:463547"
     Region          4594..4798
                     /region_name="UBCc_BIRC6"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic
                     (UBCc)-like domain of baculoviral IAP repeat-containing
                     protein 6 (BIRC6) and related proteins; cd23810"
                     /db_xref="CDD:467430"
     CDS             1..4879
                     /gene="BIRC6"
                     /coded_by="XM_061155638.1:62..14701"
                     /db_xref="GeneID:133065023"
ORIGIN      
        1 mvtgggaapp gtvteplpsv ivlsagrkma aaaaaasgpg cssaagagaa gvsewlvlrd
       61 gcmrcdadgl hslsyhpaln ailavtsrgt ikvidgtsga tlqasalsak pggqvkcqyi
      121 savdkvifvd dyavgcrkdl ngillldtal qtpvskqddv vqlelpvtea qqllsaclek
      181 vdvsstegyd lfitqlkdgl kntshetaan hkvakwatvt fhlphhvlks iasaivnelk
      241 kinqnvaalp vassvmdrls yllpsarpel gvgpgrsvdr slmyseanrr etftswphvg
      301 yrwaqpdpma qagfyhqpas sgddramcft csvclvcwep tdepwseher hspncpfvkg
      361 ehtqnvplsv tlatspaqfp ctdgtdrisc fgsgscphfl aaatkrgkic iwdvsklmkv
      421 hlkfeinayd paivqqlils gepnsavesr rptlawleds sscsdipkle gdsddlleds
      481 dseehsrsds vtghtsqkea mevsldital silqqpeklq weivanvled tvkdleelga
      541 npcltsskse ktkekhqeqh nipfpcllag glltykspat spissnshrs ldglsrtqge
      601 siseqgstdn esctnselns plvrrtlpil llysikesde kagkifsqmn nimskslhdd
      661 gftvpqiiem eldsqeqlll qdppvtyiqq fadaaanlts pdsekwnsvf pkpgtlvqcl
      721 rlpkfaeeen lcidsitpca dgihlliglr tcpveslsai nqvealnnln klnsalcnrr
      781 kgelesnlaa vnganisiiq hespadvqtp liiqpeqrnv sggylilykm nyatrivtle
      841 eepikiqhik dpqdtitsli llppdildnr eddyeeppee mqltskngve rgkksdistl
      901 ghlvittqgg yvkildlsnf eilakveppk kegteeqdaf vsviycsgtd rlcactkgge
      961 lhflqiggtc ddideadilv dgslskgiep ssegskplsn psspgisgvd llvdqpftvd
     1021 iltslveltr fetltprfsa tvppcwvevq qeqqqrrhpq hlhqqhhgda aqhtrtwklq
     1081 tdsnswdehv felvlpkacm vghvdfkfvl nsnitnipqi qvtllknkap glgkvnetav
     1141 drqitfplsp alnieveqng kpslvdlnee mqhmdveesq clrlcpfled hkedilcgpv
     1201 wlasgldlsg hagmltltsp klvkgmaggk yrsflihvka vnergtdeic nggirpvvrl
     1261 pslkhqsnkg cslasllakv aagkekssnv knentsgtrk senlrgcdll qevsvtirrf
     1321 kktsiskerv qrcamlqfse fhekllntlc rkaddgqite haqslvldil cwlagvhsng
     1381 pgsskegnes llsktrkcls divrvcffea grsiahkcar flalcisngk cdpcqpgfgs
     1441 vllkalldnm sflpaaatgg svywyfvlln yvkdddlagc stacasllta vsrqlqdrlt
     1501 pmeallqtry glysspfdpv lfdlemsgss cktvynssvg vqsdeidlsd vlsgngkvss
     1561 ctaaegsfts ltgllevepl hfscvstsdg trierddast ftvssfgvtp avgglssgtv
     1621 geastalssa aqvalqslsh amasaeqqlq vlqekqqqll klqqqkakle aklhqttaaa
     1681 aaaasaasav gpvhnsvpsn pvaapgffih psdvipptpk ttplfmtppl tppneavsvv
     1741 inaelaqlfp gsvidppavn laahnknsnk srmnplgsgl alaishashf lqppphqsii
     1801 iermhsgarr fvtldfgrpi lltdvliptc gdlaslsidi wtlgeevdgr rlvvatdist
     1861 hslilhdlip ppvcrfmkit vigrygstna rakiplgfyy ghtyilpwes elklmhdplr
     1921 gegesanqpe idqhlammva lqediqcryn lachrletll qsidlpplns annaqyflrk
     1981 pdkaveedsr vfsayqdciq lqlqlnlahn avqrlkvalg asrkmlsets dpkdliqtsp
     2041 teqlrtviry lldtllsllh ssnghsipav lqstfhaqac eelfkhlcis gtpkirlhtg
     2101 lllvqlcgge rwwgqflsnv lqelynseql lifpqdrvfm llscigqrsl snsgvlesll
     2161 nlldnllspl qpqlpmhrrt egvldipmis wvvmlvsrll dyvatvedea aaakkplngn
     2221 qwsfinnnlh tqnisrsskg sssldrlysr kirkqlvhhk qqlnllkakq kalveqmeke
     2281 kiqsnkgssy kllveqaklk qatskhfkdl irlrrtaews rsnldtevtt tkespeiepl
     2341 pftlaherci svvqklvlfl lsmdftchad lllfvckvla rianatrpti hlceivnepq
     2401 lerlllllvg tdfnrgdisw ggawaqyslt cmlqdilage llapvaaeam eegtvsddvg
     2461 atagdsddsl qqssvqllet ideplthdmt gapplsslek dkeidlellq dlmevdidpl
     2521 didlekdpla akvfkpisst wydywgadyg tynynpyigg lgipvakppa naekngsqtv
     2581 svsvsqalda rlevgleqqa elmlkmmstl eadsilqalt ntsptlsqsp tgtddsllgg
     2641 lqaanqssql ivqlssvpml nvcfnklfsm lqvhhvqles llqlwltlsl nssssgnken
     2701 gadiflynan ripvitlnqa sitsfltvla wypntllrtw clvlhsltlm tnmqlnpgss
     2761 stigtqesta hllvsdanli hvlvkflsgt sphgtnqhsp qvgptatqam qefltrlqvh
     2821 lsstcpqifs efllklihil stergafqtg qgpldaqvkl leftleqnfe vvsvstisav
     2881 iesvtflvhh yitcsdkvms rsgsdssvga racfgglfan lirpgdakav cgemtrdqlm
     2941 fdllklvnil vqlplsgnre ysarvpvttn ttdsvsdeek vsggkdgngs tssiqgppay
     3001 vadlvlanqq imsqilsalg lcnssamami igasglhltk henfhgglda isvgdglfti
     3061 lttlskrast vhtmlqpilt ymacgymgrq gslatcqlse pllwfilrvl dtsdalkafh
     3121 dmggvqlicn nmvtstraiv ntarsmvsti mkfldsgpnk avdstlktri lasepdnaeg
     3181 ihnfaplgti tsssptaqpa evllqatpph rrarsaawsy iflpeeawcd ltihlpaavl
     3241 lkeihiqphl aslatcpssv svevsadgvn mlplstpvvt sgltyikiql vkaevasavc
     3301 lrlhrprdas tlglsqikll gltafgttss atvnnpflps edqvsktsig wlrllhhclt
     3361 hisdlegmma saaaptanll qtcaallmsp ycgmhspnie vvlvkiglqs triglklidi
     3421 llrncaasgs dptdlnspll fgrlnglssd stidilyqlg ttqdpgtkdr iqallkwvsd
     3481 sarvaamkrs grmsymcpns ssieygllmp spshlhcvaa ilwhsyellv eydlpalldr
     3541 elfellfnws mslpcnmvlk kavdsllcsm chihpsyfsl lmgwmgitpp pvqchhrlsm
     3601 tddskkqdls ssltddskna qaplaltesh latlasssqs peaikqllds glpsllvrsl
     3661 asfcfnhisy sesiaqsvdt sqdklrrhhv pqqcnkmpit adlvapilrf ltevgnshim
     3721 kdwlggsevn plwtallfll chsgstsggh nlsaqqtsar saslssaatt glttqqrtai
     3781 enatvafflq cischpnnqk lmaqvlcelf qtspqrgnlp tsgnisgfvr rlflqlmled
     3841 ekvtmflqsp cplykgrina tshviqhpmf gaghkfrtlh lpvsttlsev ldrvsdtpsi
     3901 takliseqkd dkekknheek ekvkaengfq dnysvvvasg lksqskravs stpprppsrr
     3961 grtmpdkigs assgadaask iitvpvfhlf hkllagqplp aemtlaqllt llydrklpqg
     4021 yrsidltvkl gsrvitdpsl sktdsfkrlh pekdhgdllg scpddealtp sdecmdgild
     4081 eslletcpiq splqvfagmg glaliaerlp mlypeviqqv sapvvtsttq ekpkdsdqfe
     4141 wvtieqsgel vyeapetiaa epppiksavq tmspipahsl aafglflrlp gyaevllker
     4201 khaqcllrlv lgvtddgegs hilqspsanv lptlpfhvlr slfsttpltt ddgvllrrma
     4261 leigalhlil vclsalshha prvpnsslnq tepqvssshn ptsteeqqly wakgtgfgtg
     4321 stasgwdveq altkqrleee hvtcllqvla syinpasgav ngeaqsshes rgqnsnalps
     4381 vllellsqsc lipamssylr ndsvldmarh vplyrallel lraiascacm vplllplsae
     4441 ngeeegeqse cqtsvgtlla kmktcvdtyt nrlrskrenv ktgvkpdasd qepegltllv
     4501 pdiqktaeiv yaattslrqa nqekklgeys kkvamkpkpl svlksleeky vavmkklqfd
     4561 tfemvseded gklgfkvnyh ymsqvknand ansaararrl aqeavtlsts lplsssssvf
     4621 vrcdeerldi mkvlitgpad tpyangcfef dvyfpqdyps spplvnlett gghsvrfnpn
     4681 lyndgkvcls ilntwhgrpe ekwnpqtssf lqvlvsvqsl ilvaepyfne pgyersrgtp
     4741 sgtqssreyd gnirqatvkw amleqirnps pcfkevihkh fylkrveima qceewiadvq
     4801 qyssdkrvgr tmshhaaalk rhtaqlreel lklpcpegld pdaddssemc satagaeetl
     4861 mhdqvkpsss kelpsdfkl
//
LOCUS       XP_061011622            4874 aa            linear   MAM 02-DEC-2023
DEFINITION  baculoviral IAP repeat-containing protein 6 isoform X4 [Dama dama].
ACCESSION   XP_061011622
VERSION     XP_061011622.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155639.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4874
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..4874
                     /product="baculoviral IAP repeat-containing protein 6
                     isoform X4"
                     /calculated_mol_wt=531585
     Region          289..359
                     /region_name="BIR"
                     /note="Inhibitor of Apoptosis domain; pfam00653"
                     /db_xref="CDD:459891"
     Site            order(317,325,327,334..336,338,342,347,351..352)
                     /site_type="active"
                     /note="peptide binding groove [active]"
                     /db_xref="CDD:237989"
     Site            order(328,331,348,355)
                     /site_type="other"
                     /note="Zn2+ binding site [ion binding]"
                     /db_xref="CDD:237989"
     Region          901..>974
                     /region_name="Nsa1_WDR74-like"
                     /note="Ribosome biogenesis protein Nsa1 and similar
                     proteins; cl45912"
                     /db_xref="CDD:459257"
     Region          3479..3634
                     /region_name="BIRC6"
                     /note="Baculoviral IAP repeat-containing protein 6;
                     pfam12356"
                     /db_xref="CDD:463547"
     Region          4589..4793
                     /region_name="UBCc_BIRC6"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic
                     (UBCc)-like domain of baculoviral IAP repeat-containing
                     protein 6 (BIRC6) and related proteins; cd23810"
                     /db_xref="CDD:467430"
     CDS             1..4874
                     /gene="BIRC6"
                     /coded_by="XM_061155639.1:61..14685"
                     /db_xref="GeneID:133065023"
ORIGIN      
        1 mvtgggaapp gtvteplpsv ivlsagrkma aaaaaasgpg cssaagagaa gvsewlvlrd
       61 gcmrcdadgl hslsyhpaln ailavtsrgt ikvidgtsga tlqasalsak pggqvkcqyi
      121 savdkvifvd dyavgcrkdl ngillldtal qtpvskqddv vqlelpvtea qqllsaclek
      181 vdvsstegyd lfitqlkdgl kntshetaan hkvakwatvt fhlphhvlks iasaivnelk
      241 kinqnvaalp vassvmdrls yllpsarpel gvgpgrsvdr slmyseanrr etftswphvg
      301 yrwaqpdpma qagfyhqpas sgddramcft csvclvcwep tdepwseher hspncpfvkg
      361 ehtqnvplsv tlatspaqfp ctdgtdrisc fgsgscphfl aaatkrgkic iwdvsklmkv
      421 hlkfeinayd paivqqlils gepnsavesr rptlawleds sscsdipkle gdsddlleds
      481 dseehsrsds vtghtsqkea mevsldital silqqpeklq weivanvled tvkdleelga
      541 npcltsskse ktkekhqeqh nipfpcllag glltykspat spissnshrs ldglsrtqge
      601 siseqgstdn esctnselns plvrrtlpil llysikesde kagkifsqmn nimskslhdd
      661 gftvpqiiem eldsqeqlll qdppvtyiqq fadaaanlts pdsekwnsvf pkpgtlvqcl
      721 rlpkfaeeen lcidsitpca dgihlliglr tcpveslsai nqvealnnln klnsalcnrr
      781 kgelesnlaa vnganisiiq hespadvqtp liiqpeqrnv sggylilykm nyatrivtle
      841 eepikiqhik dpqdtitsli llppdildnr eddyeeppee mqltskngve rgkksdistl
      901 ghlvittqgg yvkildlsnf eilakveppk kegteeqdaf vsviycsgtd rlcactkgge
      961 lhflqiggtc ddideadilv dgslskgiep ssegskplsn psspgisgvd llvdqpftvd
     1021 iltslveltr fetltprfsa tvppcwvevq qeqqqrrhpq hlhqqhhgda aqhtrtwklq
     1081 tdsnswdehv felvlpkacm vghvdfkfvl nsnitnipqi qvtllknkap glgkvnalni
     1141 eveqngkpsl vdlneemqhm dveesqclrl cpfledhked ilcgpvwlas gldlsghagm
     1201 ltltspklvk gmaggkyrsf lihvkavner gtdeicnggi rpvvrlpslk hqsnkgcsla
     1261 sllakvaagk ekssnvknen tsgtrksenl rgcdllqevs vtirrfkkts iskervqrca
     1321 mlqfsefhek llntlcrkad dgqitehaqs lvldilcwla gvhsngpgss kegnesllsk
     1381 trkclsdivr vcffeagrsi ahkcarflal cisngkcdpc qpgfgsvllk alldnmsflp
     1441 aaatggsvyw yfvllnyvkd ddlagcstac aslltavsrq lqdrltpmea llqtryglys
     1501 spfdpvlfdl emsgsscktv ynssvgvqsd eidlsdvlsg ngkvssctaa egsftsltgl
     1561 leveplhfsc vstsdgtrie rddastftvs sfgvtpavgg lssgtvgeas talssaaqva
     1621 lqslshamas aeqqlqvlqe kqqqllklqq qkakleaklh qttaaaaaaa saasavgpvh
     1681 nsvpsnpvaa pgffihpsdv ipptpkttpl fmtppltppn eavsvvinae laqlfpgsvi
     1741 dppavnlaah nknsnksrmn plgsglalai shashflqpp phqsiiierm hsgarrfvtl
     1801 dfgrpilltd vliptcgdla slsidiwtlg eevdgrrlvv atdisthsli lhdlipppvc
     1861 rfmkitvigr ygstnaraki plgfyyghty ilpweselkl mhdplrgege sanqpeidqh
     1921 lammvalqed iqcrynlach rletllqsid lpplnsanna qyflrkpdka veedsrvfsa
     1981 yqdciqlqlq lnlahnavqr lkvalgasrk mlsetsdpkd liqtspteql rtvirylldt
     2041 llsllhssng hsipavlqst fhaqaceelf khlcisgtpk irlhtglllv qlcggerwwg
     2101 qflsnvlqel ynseqllifp qdrvfmllsc igqrslsnsg vlesllnlld nllsplqpql
     2161 pmhrrtegvl dipmiswvvm lvsrlldyva tvedeaaaak kplngkdrer fmtgnqwsfi
     2221 nnnlhtqnis rsskgsssld rlysrkirkq lvhhkqqlnl lkakqkalve qmekekiqsn
     2281 kgssykllve qaklkqatsk hfkdlirlrr taewsrsnld tevtttkesp eieplpftla
     2341 hercisvvqk lvlfllsmdf tchadlllfv ckvlariana trptihlcei vnepqlerll
     2401 lllvgtdfnr gdiswggawa qysltcmlqd ilagellapv aaeameegtv sddvgatagd
     2461 sddslqqssv qlletidepl thdmtgappl sslekdkeid lellqdlmev didpldidle
     2521 kdplaakvfk pisstwydyw gadygtynyn pyigglgipv akppanaekn gsqtvsvsvs
     2581 qaldarlevg leqqaelmlk mmstleadsi lqaltntspt lsqsptgtdd sllgglqaan
     2641 qssqlivqls svpmlnvcfn klfsmlqvhh vqlesllqlw ltlslnssss gnkengadif
     2701 lynanripvi tlnqasitsf ltvlawypnt llrtwclvlh sltlmtnmql npgssstigt
     2761 qestahllvs danlihvlvk flsgtsphgt nqhspqvgpt atqamqeflt rlqvhlsstc
     2821 pqifsefllk lihilsterg afqtgqgpld aqvklleftl eqnfevvsvs tisaviesvt
     2881 flvhhyitcs dkvmsrsgsd ssvgaracfg glfanlirpg dakavcgemt rdqlmfdllk
     2941 lvnilvqlpl sgnreysarv pvttnttdsv sdeekvsggk dgngstssiq gppayvadlv
     3001 lanqqimsqi lsalglcnss amamiigasg lhltkhenfh ggldaisvgd glftilttls
     3061 krastvhtml qpiltymacg ymgrqgslat cqlsepllwf ilrvldtsda lkafhdmggv
     3121 qlicnnmvts traivntars mvstimkfld sgpnkavdst lktrilasep dnaegihnfa
     3181 plgtitsssp taqpaevllq atpphrrars aawsyiflpe eawcdltihl paavllkeih
     3241 iqphlaslat cpssvsvevs adgvnmlpls tpvvtsglty ikiqlvkaev asavclrlhr
     3301 prdastlgls qikllgltaf gttssatvnn pflpsedqvs ktsigwlrll hhclthisdl
     3361 egmmasaaap tanllqtcaa llmspycgmh spnievvlvk iglqstrigl klidillrnc
     3421 aasgsdptdl nspllfgrln glssdstidi lyqlgttqdp gtkdriqall kwvsdsarva
     3481 amkrsgrmsy mcpnsssiey gllmpspshl hcvaailwhs yellveydlp alldrelfel
     3541 lfnwsmslpc nmvlkkavds llcsmchihp syfsllmgwm gitpppvqch hrlsmtddsk
     3601 kqdlsssltd dsknaqapla lteshlatla sssqspeaik qlldsglpsl lvrslasfcf
     3661 nhisysesia qsvdtsqdkl rrhhvpqqcn kmpitadlva pilrfltevg nshimkdwlg
     3721 gsevnplwta llfllchsgs tsgghnlsaq qtsarsasls saattglttq qrtaienatv
     3781 afflqcisch pnnqklmaqv lcelfqtspq rgnlptsgni sgfvrrlflq lmledekvtm
     3841 flqspcplyk grinatshvi qhpmfgaghk frtlhlpvst tlsevldrvs dtpsitakli
     3901 seqkddkekk nheekekvka engfqdnysv vvasglksqs kravsstppr ppsrrgrtmp
     3961 dkigsassga daaskiitvp vfhlfhklla gqplpaemtl aqlltllydr klpqgyrsid
     4021 ltvklgsrvi tdpslsktds fkrlhpekdh gdllgscpdd ealtpsdecm dgildeslle
     4081 tcpiqsplqv fagmgglali aerlpmlype viqqvsapvv tsttqekpkd sdqfewvtie
     4141 qsgelvyeap etiaaepppi ksavqtmspi pahslaafgl flrlpgyaev llkerkhaqc
     4201 llrlvlgvtd dgegshilqs psanvlptlp fhvlrslfst tplttddgvl lrrmaleiga
     4261 lhlilvclsa lshhaprvpn sslnqtepqv ssshnptste eqqlywakgt gfgtgstasg
     4321 wdveqaltkq rleeehvtcl lqvlasyinp asgavngeaq sshesrgqns nalpsvllel
     4381 lsqsclipam ssylrndsvl dmarhvplyr allellraia scacmvplll plsaengeee
     4441 geqsecqtsv gtllakmktc vdtytnrlrs krenvktgvk pdasdqepeg ltllvpdiqk
     4501 taeivyaatt slrqanqekk lgeyskkvam kpkplsvlks leekyvavmk klqfdtfemv
     4561 sededgklgf kvnyhymsqv knandansaa rarrlaqeav tlstslplss sssvfvrcde
     4621 erldimkvli tgpadtpyan gcfefdvyfp qdypsspplv nlettgghsv rfnpnlyndg
     4681 kvclsilntw hgrpeekwnp qtssflqvlv svqslilvae pyfnepgyer srgtpsgtqs
     4741 sreydgnirq atvkwamleq irnpspcfke vihkhfylkr veimaqceew iadvqqyssd
     4801 krvgrtmshh aaalkrhtaq lreellklpc pegldpdadd ssemcsatag aeetlmhdqv
     4861 kpssskelps dfkl
//
LOCUS       XP_061011623            4865 aa            linear   MAM 02-DEC-2023
DEFINITION  baculoviral IAP repeat-containing protein 6 isoform X5 [Dama dama].
ACCESSION   XP_061011623
VERSION     XP_061011623.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155640.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4865
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..4865
                     /product="baculoviral IAP repeat-containing protein 6
                     isoform X5"
                     /calculated_mol_wt=530464
     Region          289..359
                     /region_name="BIR"
                     /note="Inhibitor of Apoptosis domain; pfam00653"
                     /db_xref="CDD:459891"
     Site            order(317,325,327,334..336,338,342,347,351..352)
                     /site_type="active"
                     /note="peptide binding groove [active]"
                     /db_xref="CDD:237989"
     Site            order(328,331,348,355)
                     /site_type="other"
                     /note="Zn2+ binding site [ion binding]"
                     /db_xref="CDD:237989"
     Region          901..>974
                     /region_name="Nsa1_WDR74-like"
                     /note="Ribosome biogenesis protein Nsa1 and similar
                     proteins; cl45912"
                     /db_xref="CDD:459257"
     Region          3470..3625
                     /region_name="BIRC6"
                     /note="Baculoviral IAP repeat-containing protein 6;
                     pfam12356"
                     /db_xref="CDD:463547"
     Region          4580..4784
                     /region_name="UBCc_BIRC6"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic
                     (UBCc)-like domain of baculoviral IAP repeat-containing
                     protein 6 (BIRC6) and related proteins; cd23810"
                     /db_xref="CDD:467430"
     CDS             1..4865
                     /gene="BIRC6"
                     /coded_by="XM_061155640.1:61..14658"
                     /db_xref="GeneID:133065023"
ORIGIN      
        1 mvtgggaapp gtvteplpsv ivlsagrkma aaaaaasgpg cssaagagaa gvsewlvlrd
       61 gcmrcdadgl hslsyhpaln ailavtsrgt ikvidgtsga tlqasalsak pggqvkcqyi
      121 savdkvifvd dyavgcrkdl ngillldtal qtpvskqddv vqlelpvtea qqllsaclek
      181 vdvsstegyd lfitqlkdgl kntshetaan hkvakwatvt fhlphhvlks iasaivnelk
      241 kinqnvaalp vassvmdrls yllpsarpel gvgpgrsvdr slmyseanrr etftswphvg
      301 yrwaqpdpma qagfyhqpas sgddramcft csvclvcwep tdepwseher hspncpfvkg
      361 ehtqnvplsv tlatspaqfp ctdgtdrisc fgsgscphfl aaatkrgkic iwdvsklmkv
      421 hlkfeinayd paivqqlils gepnsavesr rptlawleds sscsdipkle gdsddlleds
      481 dseehsrsds vtghtsqkea mevsldital silqqpeklq weivanvled tvkdleelga
      541 npcltsskse ktkekhqeqh nipfpcllag glltykspat spissnshrs ldglsrtqge
      601 siseqgstdn esctnselns plvrrtlpil llysikesde kagkifsqmn nimskslhdd
      661 gftvpqiiem eldsqeqlll qdppvtyiqq fadaaanlts pdsekwnsvf pkpgtlvqcl
      721 rlpkfaeeen lcidsitpca dgihlliglr tcpveslsai nqvealnnln klnsalcnrr
      781 kgelesnlaa vnganisiiq hespadvqtp liiqpeqrnv sggylilykm nyatrivtle
      841 eepikiqhik dpqdtitsli llppdildnr eddyeeppee mqltskngve rgkksdistl
      901 ghlvittqgg yvkildlsnf eilakveppk kegteeqdaf vsviycsgtd rlcactkgge
      961 lhflqiggtc ddideadilv dgslskgiep ssegskplsn psspgisgvd llvdqpftvd
     1021 iltslveltr fetltprfsa tvppcwvevq qeqqqrrhpq hlhqqhhgda aqhtrtwklq
     1081 tdsnswdehv felvlpkacm vghvdfkfvl nsnitnipqi qvtllknkap glgkvnalni
     1141 eveqngkpsl vdlneemqhm dveesqclrl cpfledhked ilcgpvwlas gldlsghagm
     1201 ltltspklvk gmaggkyrsf lihvkavner gtdeicnggi rpvvrlpslk hqsnkgcsla
     1261 sllakvaagk ekssnvknen tsgtrksenl rgcdllqevs vtirrfkkts iskervqrca
     1321 mlqfsefhek llntlcrkad dgqitehaqs lvldilcwla gvhsngpgss kegnesllsk
     1381 trkclsdivr vcffeagrsi ahkcarflal cisngkcdpc qpgfgsvllk alldnmsflp
     1441 aaatggsvyw yfvllnyvkd ddlagcstac aslltavsrq lqdrltpmea llqtryglys
     1501 spfdpvlfdl emsgsscktv ynssvgvqsd eidlsdvlsg ngkvssctaa egsftsltgl
     1561 leveplhfsc vstsdgtrie rddastftvs sfgvtpavgg lssgtvgeas talssaaqva
     1621 lqslshamas aeqqlqvlqe kqqqllklqq qkakleaklh qttaaaaaaa saasavgpvh
     1681 nsvpsnpvaa pgffihpsdv ipptpkttpl fmtppltppn eavsvvinae laqlfpgsvi
     1741 dppavnlaah nknsnksrmn plgsglalai shashflqpp phqsiiierm hsgarrfvtl
     1801 dfgrpilltd vliptcgdla slsidiwtlg eevdgrrlvv atdisthsli lhdlipppvc
     1861 rfmkitvigr ygstnaraki plgfyyghty ilpweselkl mhdplrgege sanqpeidqh
     1921 lammvalqed iqcrynlach rletllqsid lpplnsanna qyflrkpdka veedsrvfsa
     1981 yqdciqlqlq lnlahnavqr lkvalgasrk mlsetsdpkd liqtspteql rtvirylldt
     2041 llsllhssng hsipavlqst fhaqaceelf khlcisgtpk irlhtglllv qlcggerwwg
     2101 qflsnvlqel ynseqllifp qdrvfmllsc igqrslsnsg vlesllnlld nllsplqpql
     2161 pmhrrtegvl dipmiswvvm lvsrlldyva tvedeaaaak kplngnqwsf innnlhtqni
     2221 srsskgsssl drlysrkirk qlvhhkqqln llkakqkalv eqmekekiqs nkgssykllv
     2281 eqaklkqats khfkdlirlr rtaewsrsnl dtevtttkes peieplpftl ahercisvvq
     2341 klvlfllsmd ftchadlllf vckvlarian atrptihlce ivnepqlerl llllvgtdfn
     2401 rgdiswggaw aqysltcmlq dilagellap vaaeameegt vsddvgatag dsddslqqss
     2461 vqlletidep lthdmtgapp lsslekdkei dlellqdlme vdidpldidl ekdplaakvf
     2521 kpisstwydy wgadygtyny npyigglgip vakppanaek ngsqtvsvsv sqaldarlev
     2581 gleqqaelml kmmstleads ilqaltntsp tlsqsptgtd dsllgglqaa nqssqlivql
     2641 ssvpmlnvcf nklfsmlqvh hvqlesllql wltlslnsss sgnkengadi flynanripv
     2701 itlnqasits fltvlawypn tllrtwclvl hsltlmtnmq lnpgssstig tqestahllv
     2761 sdanlihvlv kflsgtsphg tnqhspqvgp tatqamqefl trlqvhlsst cpqifsefll
     2821 klihilster gafqtgqgpl daqvklleft leqnfevvsv stisaviesv tflvhhyitc
     2881 sdkvmsrsgs dssvgaracf gglfanlirp gdakavcgem trdqlmfdll klvnilvqlp
     2941 lsgnreysar vpvttnttds vsdeekvsgg kdgngstssi qgppayvadl vlanqqimsq
     3001 ilsalglcns samamiigas glhltkhenf hggldaisvg dglftilttl skrastvhtm
     3061 lqpiltymac gymgrqgsla tcqlsepllw filrvldtsd alkafhdmgg vqlicnnmvt
     3121 straivntar smvstimkfl dsgpnkavds tlktrilase pdnaegihnf aplgtitsss
     3181 ptaqpaevll qatpphrrar saawsyiflp eeawcdltih lpaavllkei hiqphlasla
     3241 tcpssvsvev sadgvnmlpl stpvvtsglt yikiqlvkae vasavclrlh rprdastlgl
     3301 sqikllglta fgttssatvn npflpsedqv sktsigwlrl lhhclthisd legmmasaaa
     3361 ptanllqtca allmspycgm hspnievvlv kiglqstrig lklidillrn caasgsdptd
     3421 lnspllfgrl nglssdstid ilyqlgttqd pgtkdriqal lkwvsdsarv aamkrsgrms
     3481 ymcpnsssie ygllmpspsh lhcvaailwh syellveydl palldrelfe llfnwsmslp
     3541 cnmvlkkavd sllcsmchih psyfsllmgw mgitpppvqc hhrlsmtdds kkqdlssslt
     3601 ddsknaqapl alteshlatl asssqspeai kqlldsglps llvrslasfc fnhisysesi
     3661 aqsvdtsqdk lrrhhvpqqc nkmpitadlv apilrfltev gnshimkdwl ggsevnplwt
     3721 allfllchsg stsgghnlsa qqtsarsasl ssaattgltt qqrtaienat vafflqcisc
     3781 hpnnqklmaq vlcelfqtsp qrgnlptsgn isgfvrrlfl qlmledekvt mflqspcply
     3841 kgrinatshv iqhpmfgagh kfrtlhlpvs ttlsevldrv sdtpsitakl iseqkddkek
     3901 knheekekvk aengfqdnys vvvasglksq skravsstpp rppsrrgrtm pdkigsassg
     3961 adaaskiitv pvfhlfhkll agqplpaemt laqlltllyd rklpqgyrsi dltvklgsrv
     4021 itdpslsktd sfkrlhpekd hgdllgscpd dealtpsdec mdgildesll etcpiqsplq
     4081 vfagmgglal iaerlpmlyp eviqqvsapv vtsttqekpk dsdqfewvti eqsgelvyea
     4141 petiaaeppp iksavqtmsp ipahslaafg lflrlpgyae vllkerkhaq cllrlvlgvt
     4201 ddgegshilq spsanvlptl pfhvlrslfs ttplttddgv llrrmaleig alhlilvcls
     4261 alshhaprvp nsslnqtepq vssshnptst eeqqlywakg tgfgtgstas gwdveqaltk
     4321 qrleeehvtc llqvlasyin pasgavngea qsshesrgqn snalpsvlle llsqsclipa
     4381 mssylrndsv ldmarhvply rallellrai ascacmvpll lplsaengee egeqsecqts
     4441 vgtllakmkt cvdtytnrlr skrenvktgv kpdasdqepe gltllvpdiq ktaeivyaat
     4501 tslrqanqek klgeyskkva mkpkplsvlk sleekyvavm kklqfdtfem vsededgklg
     4561 fkvnyhymsq vknandansa ararrlaqea vtlstslpls ssssvfvrcd eerldimkvl
     4621 itgpadtpya ngcfefdvyf pqdypssppl vnlettgghs vrfnpnlynd gkvclsilnt
     4681 whgrpeekwn pqtssflqvl vsvqslilva epyfnepgye rsrgtpsgtq ssreydgnir
     4741 qatvkwamle qirnpspcfk evihkhfylk rveimaqcee wiadvqqyss dkrvgrtmsh
     4801 haaalkrhta qlreellklp cpegldpdad dssemcsata gaeetlmhdq vkpssskelp
     4861 sdfkl
//
LOCUS       XP_061011624            4855 aa            linear   MAM 02-DEC-2023
DEFINITION  baculoviral IAP repeat-containing protein 6 isoform X6 [Dama dama].
ACCESSION   XP_061011624
VERSION     XP_061011624.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155641.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4855
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..4855
                     /product="baculoviral IAP repeat-containing protein 6
                     isoform X6"
                     /calculated_mol_wt=529413
     Region          289..359
                     /region_name="BIR"
                     /note="Inhibitor of Apoptosis domain; pfam00653"
                     /db_xref="CDD:459891"
     Site            order(317,325,327,334..336,338,342,347,351..352)
                     /site_type="active"
                     /note="peptide binding groove [active]"
                     /db_xref="CDD:237989"
     Site            order(328,331,348,355)
                     /site_type="other"
                     /note="Zn2+ binding site [ion binding]"
                     /db_xref="CDD:237989"
     Region          901..>974
                     /region_name="Nsa1_WDR74-like"
                     /note="Ribosome biogenesis protein Nsa1 and similar
                     proteins; cl45912"
                     /db_xref="CDD:459257"
     Region          3460..3615
                     /region_name="BIRC6"
                     /note="Baculoviral IAP repeat-containing protein 6;
                     pfam12356"
                     /db_xref="CDD:463547"
     Region          4570..4774
                     /region_name="UBCc_BIRC6"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic
                     (UBCc)-like domain of baculoviral IAP repeat-containing
                     protein 6 (BIRC6) and related proteins; cd23810"
                     /db_xref="CDD:467430"
     CDS             1..4855
                     /gene="BIRC6"
                     /coded_by="XM_061155641.1:61..14628"
                     /db_xref="GeneID:133065023"
ORIGIN      
        1 mvtgggaapp gtvteplpsv ivlsagrkma aaaaaasgpg cssaagagaa gvsewlvlrd
       61 gcmrcdadgl hslsyhpaln ailavtsrgt ikvidgtsga tlqasalsak pggqvkcqyi
      121 savdkvifvd dyavgcrkdl ngillldtal qtpvskqddv vqlelpvtea qqllsaclek
      181 vdvsstegyd lfitqlkdgl kntshetaan hkvakwatvt fhlphhvlks iasaivnelk
      241 kinqnvaalp vassvmdrls yllpsarpel gvgpgrsvdr slmyseanrr etftswphvg
      301 yrwaqpdpma qagfyhqpas sgddramcft csvclvcwep tdepwseher hspncpfvkg
      361 ehtqnvplsv tlatspaqfp ctdgtdrisc fgsgscphfl aaatkrgkic iwdvsklmkv
      421 hlkfeinayd paivqqlils gepnsavesr rptlawleds sscsdipkle gdsddlleds
      481 dseehsrsds vtghtsqkea mevsldital silqqpeklq weivanvled tvkdleelga
      541 npcltsskse ktkekhqeqh nipfpcllag glltykspat spissnshrs ldglsrtqge
      601 siseqgstdn esctnselns plvrrtlpil llysikesde kagkifsqmn nimskslhdd
      661 gftvpqiiem eldsqeqlll qdppvtyiqq fadaaanlts pdsekwnsvf pkpgtlvqcl
      721 rlpkfaeeen lcidsitpca dgihlliglr tcpveslsai nqvealnnln klnsalcnrr
      781 kgelesnlaa vnganisiiq hespadvqtp liiqpeqrnv sggylilykm nyatrivtle
      841 eepikiqhik dpqdtitsli llppdildnr eddyeeppee mqltskngve rgkksdistl
      901 ghlvittqgg yvkildlsnf eilakveppk kegteeqdaf vsviycsgtd rlcactkgge
      961 lhflqiggtc ddideadilv dgslskgiep ssegskplsn psspgisgvd llvdqpftvd
     1021 iltslveltr fetltprfsa tvppcwvevq qeqqqrrhpq hlhqqhhgda aqhtrtwklq
     1081 tdsnswdehv felvlpkacm vghvdfkfvl nsnitnipqi qvtllknkap glgkvnetav
     1141 drqitfplsp alnieveqng kpslvdlnee mqhmdveesq clrlcpfled hkedilcgpv
     1201 wlasgldlsg hagmltltsp klvkgmaggk yrsflihvka vnergtdeic nggirpvvrl
     1261 pslkhqsnkg cslasllakv aagkekssnv knentsgtrk senlrgcdll qevsvtirrf
     1321 kktsiskerv qrcamlqfse fhekllntlc rkaddgqite haqslvldil cwlagvhsng
     1381 pgsskegnes llsktrkcls divrvcffea grsiahkcar flalcisngk cdpcqpgfgs
     1441 vllkalldnm sflpaaatgg svywyfvlln yvkdddlagc stacasllta vsrqlqdrlt
     1501 pmeallqtry glysspfdpv lfdlemsgss cktvynssvg vqsdeidlsd vlsgngkvss
     1561 ctaaegsfts ltgllevepl hfscvstsdg trierddast ftvssfgvtp avgglssgtv
     1621 geastalssa aqkakleakl hqttaaaaaa asaasavgpv hnsvpsnpva apgffihpsd
     1681 vipptpkttp lfmtppltpp neavsvvina elaqlfpgsv idppavnlaa hnknsnksrm
     1741 nplgsglala ishashflqp pphqsiiier mhsgarrfvt ldfgrpillt dvliptcgdl
     1801 aslsidiwtl geevdgrrlv vatdisthsl ilhdlipppv crfmkitvig rygstnarak
     1861 iplgfyyght yilpweselk lmhdplrgeg esanqpeidq hlammvalqe diqcrynlac
     1921 hrletllqsi dlpplnsann aqyflrkpdk aveedsrvfs ayqdciqlql qlnlahnavq
     1981 rlkvalgasr kmlsetsdpk dliqtspteq lrtvirylld tllsllhssn ghsipavlqs
     2041 tfhaqaceel fkhlcisgtp kirlhtglll vqlcggerww gqflsnvlqe lynseqllif
     2101 pqdrvfmlls cigqrslsns gvlesllnll dnllsplqpq lpmhrrtegv ldipmiswvv
     2161 mlvsrlldyv atvedeaaaa kkplngkdre rfmtgnqwsf innnlhtqni srsskgsssl
     2221 drlysrkirk qlvhhkqqln llkakqkalv eqmekekiqs nkgssykllv eqaklkqats
     2281 khfkdlirlr rtaewsrsnl dtevtttkes peieplpftl ahercisvvq klvlfllsmd
     2341 ftchadlllf vckvlarian atrptihlce ivnepqlerl llllvgtdfn rgdiswggaw
     2401 aqysltcmlq dilagellap vaaeameegt vsddvgatag dsddslqqss vqlletidep
     2461 lthdmtgapp lsslekdkei dlellqdlme vdidpldidl ekdplaakvf kpisstwydy
     2521 wgadygtyny npyigglgip vakppanaek ngsqtvsvsv sqaldarlev gleqqaelml
     2581 kmmstleads ilqaltntsp tlsqsptgtd dsllgglqaa nqssqlivql ssvpmlnvcf
     2641 nklfsmlqvh hvqlesllql wltlslnsss sgnkengadi flynanripv itlnqasits
     2701 fltvlawypn tllrtwclvl hsltlmtnmq lnpgssstig tqestahllv sdanlihvlv
     2761 kflsgtsphg tnqhspqvgp tatqamqefl trlqvhlsst cpqifsefll klihilster
     2821 gafqtgqgpl daqvklleft leqnfevvsv stisaviesv tflvhhyitc sdkvmsrsgs
     2881 dssvgaracf gglfanlirp gdakavcgem trdqlmfdll klvnilvqlp lsgnreysar
     2941 vpvttnttds vsdeekvsgg kdgngstssi qgppayvadl vlanqqimsq ilsalglcns
     3001 samamiigas glhltkhenf hggldaisvg dglftilttl skrastvhtm lqpiltymac
     3061 gymgrqgsla tcqlsepllw filrvldtsd alkafhdmgg vqlicnnmvt straivntar
     3121 smvstimkfl dsgpnkavds tlktrilase pdnaegihnf aplgtitsss ptaqpaevll
     3181 qatpphrrar saawsyiflp eeawcdltih lpaavllkei hiqphlasla tcpssvsvev
     3241 sadgvnmlpl stpvvtsglt yikiqlvkae vasavclrlh rprdastlgl sqikllglta
     3301 fgttssatvn npflpsedqv sktsigwlrl lhhclthisd legmmasaaa ptanllqtca
     3361 allmspycgm hspnievvlv kiglqstrig lklidillrn caasgsdptd lnspllfgrl
     3421 nglssdstid ilyqlgttqd pgtkdriqal lkwvsdsarv aamkrsgrms ymcpnsssie
     3481 ygllmpspsh lhcvaailwh syellveydl palldrelfe llfnwsmslp cnmvlkkavd
     3541 sllcsmchih psyfsllmgw mgitpppvqc hhrlsmtdds kkqdlssslt ddsknaqapl
     3601 alteshlatl asssqspeai kqlldsglps llvrslasfc fnhisysesi aqsvdtsqdk
     3661 lrrhhvpqqc nkmpitadlv apilrfltev gnshimkdwl ggsevnplwt allfllchsg
     3721 stsgghnlsa qqtsarsasl ssaattgltt qqrtaienat vafflqcisc hpnnqklmaq
     3781 vlcelfqtsp qrgnlptsgn isgfvrrlfl qlmledekvt mflqspcply kgrinatshv
     3841 iqhpmfgagh kfrtlhlpvs ttlsevldrv sdtpsitakl iseqkddkek knheekekvk
     3901 aengfqdnys vvvasglksq skravsstpp rppsrrgrtm pdkigsassg adaaskiitv
     3961 pvfhlfhkll agqplpaemt laqlltllyd rklpqgyrsi dltvklgsrv itdpslsktd
     4021 sfkrlhpekd hgdllgscpd dealtpsdec mdgildesll etcpiqsplq vfagmgglal
     4081 iaerlpmlyp eviqqvsapv vtsttqekpk dsdqfewvti eqsgelvyea petiaaeppp
     4141 iksavqtmsp ipahslaafg lflrlpgyae vllkerkhaq cllrlvlgvt ddgegshilq
     4201 spsanvlptl pfhvlrslfs ttplttddgv llrrmaleig alhlilvcls alshhaprvp
     4261 nsslnqtepq vssshnptst eeqqlywakg tgfgtgstas gwdveqaltk qrleeehvtc
     4321 llqvlasyin pasgavngea qsshesrgqn snalpsvlle llsqsclipa mssylrndsv
     4381 ldmarhvply rallellrai ascacmvpll lplsaengee egeqsecqts vgtllakmkt
     4441 cvdtytnrlr skrenvktgv kpdasdqepe gltllvpdiq ktaeivyaat tslrqanqek
     4501 klgeyskkva mkpkplsvlk sleekyvavm kklqfdtfem vsededgklg fkvnyhymsq
     4561 vknandansa ararrlaqea vtlstslpls ssssvfvrcd eerldimkvl itgpadtpya
     4621 ngcfefdvyf pqdypssppl vnlettgghs vrfnpnlynd gkvclsilnt whgrpeekwn
     4681 pqtssflqvl vsvqslilva epyfnepgye rsrgtpsgtq ssreydgnir qatvkwamle
     4741 qirnpspcfk evihkhfylk rveimaqcee wiadvqqyss dkrvgrtmsh haaalkrhta
     4801 qlreellklp cpegldpdad dssemcsata gaeetlmhdq vkpssskelp sdfkl
//
LOCUS       XP_061011625            4844 aa            linear   MAM 02-DEC-2023
DEFINITION  baculoviral IAP repeat-containing protein 6 isoform X7 [Dama dama].
ACCESSION   XP_061011625
VERSION     XP_061011625.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155642.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4844
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..4844
                     /product="baculoviral IAP repeat-containing protein 6
                     isoform X7"
                     /calculated_mol_wt=528131
     Region          289..359
                     /region_name="BIR"
                     /note="Inhibitor of Apoptosis domain; pfam00653"
                     /db_xref="CDD:459891"
     Site            order(317,325,327,334..336,338,342,347,351..352)
                     /site_type="active"
                     /note="peptide binding groove [active]"
                     /db_xref="CDD:237989"
     Site            order(328,331,348,355)
                     /site_type="other"
                     /note="Zn2+ binding site [ion binding]"
                     /db_xref="CDD:237989"
     Region          901..>974
                     /region_name="Nsa1_WDR74-like"
                     /note="Ribosome biogenesis protein Nsa1 and similar
                     proteins; cl45912"
                     /db_xref="CDD:459257"
     Region          3449..3604
                     /region_name="BIRC6"
                     /note="Baculoviral IAP repeat-containing protein 6;
                     pfam12356"
                     /db_xref="CDD:463547"
     Region          4559..4763
                     /region_name="UBCc_BIRC6"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic
                     (UBCc)-like domain of baculoviral IAP repeat-containing
                     protein 6 (BIRC6) and related proteins; cd23810"
                     /db_xref="CDD:467430"
     CDS             1..4844
                     /gene="BIRC6"
                     /coded_by="XM_061155642.1:60..14594"
                     /db_xref="GeneID:133065023"
ORIGIN      
        1 mvtgggaapp gtvteplpsv ivlsagrkma aaaaaasgpg cssaagagaa gvsewlvlrd
       61 gcmrcdadgl hslsyhpaln ailavtsrgt ikvidgtsga tlqasalsak pggqvkcqyi
      121 savdkvifvd dyavgcrkdl ngillldtal qtpvskqddv vqlelpvtea qqllsaclek
      181 vdvsstegyd lfitqlkdgl kntshetaan hkvakwatvt fhlphhvlks iasaivnelk
      241 kinqnvaalp vassvmdrls yllpsarpel gvgpgrsvdr slmyseanrr etftswphvg
      301 yrwaqpdpma qagfyhqpas sgddramcft csvclvcwep tdepwseher hspncpfvkg
      361 ehtqnvplsv tlatspaqfp ctdgtdrisc fgsgscphfl aaatkrgkic iwdvsklmkv
      421 hlkfeinayd paivqqlils gepnsavesr rptlawleds sscsdipkle gdsddlleds
      481 dseehsrsds vtghtsqkea mevsldital silqqpeklq weivanvled tvkdleelga
      541 npcltsskse ktkekhqeqh nipfpcllag glltykspat spissnshrs ldglsrtqge
      601 siseqgstdn esctnselns plvrrtlpil llysikesde kagkifsqmn nimskslhdd
      661 gftvpqiiem eldsqeqlll qdppvtyiqq fadaaanlts pdsekwnsvf pkpgtlvqcl
      721 rlpkfaeeen lcidsitpca dgihlliglr tcpveslsai nqvealnnln klnsalcnrr
      781 kgelesnlaa vnganisiiq hespadvqtp liiqpeqrnv sggylilykm nyatrivtle
      841 eepikiqhik dpqdtitsli llppdildnr eddyeeppee mqltskngve rgkksdistl
      901 ghlvittqgg yvkildlsnf eilakveppk kegteeqdaf vsviycsgtd rlcactkgge
      961 lhflqiggtc ddideadilv dgslskgiep ssegskplsn psspgisgvd llvdqpftvd
     1021 iltslveltr fetltprfsa tvppcwvevq qeqqqrrhpq hlhqqhhgda aqhtrtwklq
     1081 tdsnswdehv felvlpkacm vghvdfkfvl nsnitnipqi qvtllknkap glgkvnglrl
     1141 cpfledhked ilcgpvwlas gldlsghagm ltltspklvk gmaggkyrsf lihvkavner
     1201 gtdeicnggi rpvvrlpslk hqsnkgcsla sllakvaagk ekssnvknen tsgtrksenl
     1261 rgcdllqevs vtirrfkkts iskervqrca mlqfsefhek llntlcrkad dgqitehaqs
     1321 lvldilcwla gvhsngpgss kegnesllsk trkclsdivr vcffeagrsi ahkcarflal
     1381 cisngkcdpc qpgfgsvllk alldnmsflp aaatggsvyw yfvllnyvkd ddlagcstac
     1441 aslltavsrq lqdrltpmea llqtryglys spfdpvlfdl emsgsscktv ynssvgvqsd
     1501 eidlsdvlsg ngkvssctaa egsftsltgl leveplhfsc vstsdgtrie rddastftvs
     1561 sfgvtpavgg lssgtvgeas talssaaqva lqslshamas aeqqlqvlqe kqqqllklqq
     1621 qkakleaklh qttaaaaaaa saasavgpvh nsvpsnpvaa pgffihpsdv ipptpkttpl
     1681 fmtppltppn eavsvvinae laqlfpgsvi dppavnlaah nknsnksrmn plgsglalai
     1741 shashflqpp phqsiiierm hsgarrfvtl dfgrpilltd vliptcgdla slsidiwtlg
     1801 eevdgrrlvv atdisthsli lhdlipppvc rfmkitvigr ygstnaraki plgfyyghty
     1861 ilpweselkl mhdplrgege sanqpeidqh lammvalqed iqcrynlach rletllqsid
     1921 lpplnsanna qyflrkpdka veedsrvfsa yqdciqlqlq lnlahnavqr lkvalgasrk
     1981 mlsetsdpkd liqtspteql rtvirylldt llsllhssng hsipavlqst fhaqaceelf
     2041 khlcisgtpk irlhtglllv qlcggerwwg qflsnvlqel ynseqllifp qdrvfmllsc
     2101 igqrslsnsg vlesllnlld nllsplqpql pmhrrtegvl dipmiswvvm lvsrlldyva
     2161 tvedeaaaak kplngkdrer fmtgnqwsfi nnnlhtqnis rsskgsssld rlysrkirkq
     2221 lvhhkqqlnl lkakqkalve qmekekiqsn kgssykllve qaklkqatsk hfkdlirlrr
     2281 taewsrsnld tevtttkesp eieplpftla hercisvvqk lvlfllsmdf tchadlllfv
     2341 ckvlariana trptihlcei vnepqlerll lllvgtdfnr gdiswggawa qysltcmlqd
     2401 ilagellapv aaeameegtv sddvgatagd sddslqqssv qlletidepl thdmtgappl
     2461 sslekdkeid lellqdlmev didpldidle kdplaakvfk pisstwydyw gadygtynyn
     2521 pyigglgipv akppanaekn gsqtvsvsvs qaldarlevg leqqaelmlk mmstleadsi
     2581 lqaltntspt lsqsptgtdd sllgglqaan qssqlivqls svpmlnvcfn klfsmlqvhh
     2641 vqlesllqlw ltlslnssss gnkengadif lynanripvi tlnqasitsf ltvlawypnt
     2701 llrtwclvlh sltlmtnmql npgssstigt qestahllvs danlihvlvk flsgtsphgt
     2761 nqhspqvgpt atqamqeflt rlqvhlsstc pqifsefllk lihilsterg afqtgqgpld
     2821 aqvklleftl eqnfevvsvs tisaviesvt flvhhyitcs dkvmsrsgsd ssvgaracfg
     2881 glfanlirpg dakavcgemt rdqlmfdllk lvnilvqlpl sgnreysarv pvttnttdsv
     2941 sdeekvsggk dgngstssiq gppayvadlv lanqqimsqi lsalglcnss amamiigasg
     3001 lhltkhenfh ggldaisvgd glftilttls krastvhtml qpiltymacg ymgrqgslat
     3061 cqlsepllwf ilrvldtsda lkafhdmggv qlicnnmvts traivntars mvstimkfld
     3121 sgpnkavdst lktrilasep dnaegihnfa plgtitsssp taqpaevllq atpphrrars
     3181 aawsyiflpe eawcdltihl paavllkeih iqphlaslat cpssvsvevs adgvnmlpls
     3241 tpvvtsglty ikiqlvkaev asavclrlhr prdastlgls qikllgltaf gttssatvnn
     3301 pflpsedqvs ktsigwlrll hhclthisdl egmmasaaap tanllqtcaa llmspycgmh
     3361 spnievvlvk iglqstrigl klidillrnc aasgsdptdl nspllfgrln glssdstidi
     3421 lyqlgttqdp gtkdriqall kwvsdsarva amkrsgrmsy mcpnsssiey gllmpspshl
     3481 hcvaailwhs yellveydlp alldrelfel lfnwsmslpc nmvlkkavds llcsmchihp
     3541 syfsllmgwm gitpppvqch hrlsmtddsk kqdlsssltd dsknaqapla lteshlatla
     3601 sssqspeaik qlldsglpsl lvrslasfcf nhisysesia qsvdtsqdkl rrhhvpqqcn
     3661 kmpitadlva pilrfltevg nshimkdwlg gsevnplwta llfllchsgs tsgghnlsaq
     3721 qtsarsasls saattglttq qrtaienatv afflqcisch pnnqklmaqv lcelfqtspq
     3781 rgnlptsgni sgfvrrlflq lmledekvtm flqspcplyk grinatshvi qhpmfgaghk
     3841 frtlhlpvst tlsevldrvs dtpsitakli seqkddkekk nheekekvka engfqdnysv
     3901 vvasglksqs kravsstppr ppsrrgrtmp dkigsassga daaskiitvp vfhlfhklla
     3961 gqplpaemtl aqlltllydr klpqgyrsid ltvklgsrvi tdpslsktds fkrlhpekdh
     4021 gdllgscpdd ealtpsdecm dgildeslle tcpiqsplqv fagmgglali aerlpmlype
     4081 viqqvsapvv tsttqekpkd sdqfewvtie qsgelvyeap etiaaepppi ksavqtmspi
     4141 pahslaafgl flrlpgyaev llkerkhaqc llrlvlgvtd dgegshilqs psanvlptlp
     4201 fhvlrslfst tplttddgvl lrrmaleiga lhlilvclsa lshhaprvpn sslnqtepqv
     4261 ssshnptste eqqlywakgt gfgtgstasg wdveqaltkq rleeehvtcl lqvlasyinp
     4321 asgavngeaq sshesrgqns nalpsvllel lsqsclipam ssylrndsvl dmarhvplyr
     4381 allellraia scacmvplll plsaengeee geqsecqtsv gtllakmktc vdtytnrlrs
     4441 krenvktgvk pdasdqepeg ltllvpdiqk taeivyaatt slrqanqekk lgeyskkvam
     4501 kpkplsvlks leekyvavmk klqfdtfemv sededgklgf kvnyhymsqv knandansaa
     4561 rarrlaqeav tlstslplss sssvfvrcde erldimkvli tgpadtpyan gcfefdvyfp
     4621 qdypsspplv nlettgghsv rfnpnlyndg kvclsilntw hgrpeekwnp qtssflqvlv
     4681 svqslilvae pyfnepgyer srgtpsgtqs sreydgnirq atvkwamleq irnpspcfke
     4741 vihkhfylkr veimaqceew iadvqqyssd krvgrtmshh aaalkrhtaq lreellklpc
     4801 pegldpdadd ssemcsatag aeetlmhdqv kpssskelps dfkl
//
LOCUS       XP_061011626             244 aa            linear   MAM 02-DEC-2023
DEFINITION  protein YIPF4 [Dama dama].
ACCESSION   XP_061011626
VERSION     XP_061011626.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155643.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..244
                     /product="protein YIPF4"
                     /calculated_mol_wt=26958
     Region          <74..237
                     /region_name="YIP1"
                     /note="Rab GTPase interacting factor, Golgi membrane
                     protein [Intracellular trafficking and secretion];
                     cl46908"
                     /db_xref="CDD:481248"
     CDS             1..244
                     /gene="YIPF4"
                     /coded_by="XM_061155643.1:230..964"
                     /db_xref="GeneID:133065025"
ORIGIN      
        1 mqppgpppay tptngdftfv ssadaedlsg siappdvkln lggdvikest attflrqrgy
       61 gwlleveddd pednkpllee ldidlkdiyy kircvlmpmp slgfnrqvvr dnpdfwgpla
      121 vvlffsmisl ygqfrvvswi itiwifgslt ifllarvlgg evaygqvlgv igysllpliv
      181 iapillvvgs fevvstlikl fgvfwaaysa asllvgeefk tkkplliypi fllyiyflsl
      241 ytgv
//
LOCUS       XP_061011627            1024 aa            linear   MAM 02-DEC-2023
DEFINITION  NLR family CARD domain-containing protein 4 [Dama dama].
ACCESSION   XP_061011627
VERSION     XP_061011627.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155644.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1024
                     /product="NLR family CARD domain-containing protein 4"
                     /calculated_mol_wt=116168
     Region          1..87
                     /region_name="CARD"
                     /note="Caspase recruitment domain; pfam00619"
                     /db_xref="CDD:459874"
     Region          163..319
                     /region_name="NACHT"
                     /note="NACHT domain; pfam05729"
                     /db_xref="CDD:428606"
     Region          465..579
                     /region_name="NLRC4_HD"
                     /note="NLRC4 helical domain; pfam17889"
                     /db_xref="CDD:436120"
     Region          627..1011
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          664..689
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          690..713
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          765..789
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          790..821
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          822..846
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          881..908
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          939..963
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1024
                     /gene="NLRC4"
                     /coded_by="XM_061155644.1:269..3343"
                     /db_xref="GeneID:133065028"
ORIGIN      
        1 mnfikensqv liqrmgmtvi kqildelfvw nvmnyeevdv iccenfeqda aravihmilk
       61 kgseacnlfl kslekwnypl fqelhglslf hqmseedldd fakelkyfyq spsflnfypl
      121 gedidimfnl kstftepvlw kkdqhhhrle qltlsglldt lqspciiege sgkgkstllq
      181 riamlwasge cqaltkfklv fflrlsrvqg glfetlcdql ldipdviskq tfmarllklr
      241 qrvlflldgy nefkaqncpe iealikenhr fknmvivstt teslryirqf galvaevgdm
      301 tessaqtliq evlrkefaeg lllqiqksrc lrnlmktplf vvitcaiqmg ksefhshtqt
      361 tlfcafydll inknrhkrkg lapsevtqsl dhcgdlaleg vfsrrfdfep ddlsnvnedv
      421 llttgllcky taqrfkpkyk ffhqsfqeyt agrrlssllt sgepaevtkg nghlqkmvsi
      481 sditskysnl llytcgssae atravlkhls avyqhgsllg lsvtkrplwr qesmqntkst
      541 tvqeilkain insftecgin lfhesistss lskefegffr gkslyinsen ipdylfdffe
      601 dlpncasald fvkldfygga vaswdktted isrtqdqefs gtyipsravs lffngkqefk
      661 tlevtlrdfc klskkdikyl ekifssatsl rlhikrcvgm agslssvltt cktihslive
      721 aspltledeq ritsvtnlqt lgihdlqiqp ppggltdslg nlkkltklil dnikmneeda
      781 lklaeglrnl kkmcllrlth lsdigegmdy ivkslsaepc dlkeiqlvsc clsgnavktl
      841 aqnlhnlarl nildlsenhl ekdgkealhq lidrlhvlee ltvlmlpwcg dvrvslarll
      901 eklervpqlv klglknwrlt daeirilgvf feknplenfq qldlagncvs sdgwlafmsg
      961 fenlkqlvff dfstkgllpd aslvrklshv lskltflqev qligwqlddy dvsvlkgafk
     1021 lvia
//
LOCUS       XP_061011628             461 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc transporter 6 isoform X1 [Dama dama].
ACCESSION   XP_061011628
VERSION     XP_061011628.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155645.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..461
                     /product="zinc transporter 6 isoform X1"
                     /calculated_mol_wt=50757
     Region          44..255
                     /region_name="Cation_efflux"
                     /note="Cation efflux family; pfam01545"
                     /db_xref="CDD:426316"
     CDS             1..461
                     /gene="SLC30A6"
                     /coded_by="XM_061155645.1:137..1522"
                     /db_xref="GeneID:133065029"
ORIGIN      
        1 mgtihlfrkp qrsffgkllq efrlvaadrr swkillfgai nltctgfllm wcsstnsial
       61 taytyltifd lfslitclis ywvmmrkpsp aysfgferle vlavfastvl aqlgalfilk
      121 esaerfleqp eihtgrllvg tfvalsfnlf tmlsirnkpf ayvseaasts wlqehvadls
      181 rsvcgiipgl ssiflprmnp fvlidlagaf alcitymlie innyfavdta saiaialmtf
      241 gtmypmsvys gkvllqttpp hvigqldkli revstldgvl evrnehfwtl gfgslagsvh
      301 vrirrdaneq mvlahvtnrl ytlvstltvq ifkddwirpa llsgpvaanv lnfsdhhvip
      361 mpplkgtdds npvtstpakp sspppefsfn tpgknvspvi llntqtrpyg lglnhghapy
      421 ssvlnqglgv pgigatqgfr tgftnipsry gtnnrigqpr p
//
LOCUS       XP_061011629             310 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc transporter 6 isoform X2 [Dama dama].
ACCESSION   XP_061011629
VERSION     XP_061011629.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155646.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..310
                     /product="zinc transporter 6 isoform X2"
                     /calculated_mol_wt=33550
     Region          <51..180
                     /region_name="CzcD"
                     /note="Co/Zn/Cd efflux system component [Inorganic ion
                     transport and metabolism]; COG1230"
                     /db_xref="CDD:440843"
     CDS             1..310
                     /gene="SLC30A6"
                     /coded_by="XM_061155646.1:161..1093"
                     /db_xref="GeneID:133065029"
ORIGIN      
        1 mlsirnkpfa yvseaastsw lqehvadlsr svcgiipgls siflprmnpf vlidlagafa
       61 lcitymliei nnyfavdtas aiaialmtfg tmypmsvysg kvllqttpph vigqldklir
      121 evstldgvle vrnehfwtlg fgslagsvhv rirrdaneqm vlahvtnrly tlvstltvqi
      181 fkddwirpal lsgpvaanvl nfsdhhvipm pplkgtddsn pvtstpakps spppefsfnt
      241 pgknvspvil lntqtrpygl glnhghapys svlnqglgvp gigatqgfrt gftnipsryg
      301 tnnrigqprp
//
LOCUS       XP_061011630             614 aa            linear   MAM 02-DEC-2023
DEFINITION  spastin isoform X1 [Dama dama].
ACCESSION   XP_061011630
VERSION     XP_061011630.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155647.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..614
                     /product="spastin isoform X1"
                     /calculated_mol_wt=67039
     Region          114..193
                     /region_name="MIT_spastin"
                     /note="MIT: domain contained within Microtubule
                     Interacting and Trafficking molecules. This MIT domain
                     sub-family is found in the AAA protein spastin, a probable
                     ATPase involved in the assembly or function of nuclear
                     protein complexes; spastins might also be...; cd02679"
                     /db_xref="CDD:239142"
     Region          341..504
                     /region_name="RecA-like_spastin"
                     /note="ATPase domain of spastin; cd19524"
                     /db_xref="CDD:410932"
     Site            order(342..345,382..388)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:410932"
     Region          531..585
                     /region_name="AAA_lid_3"
                     /note="AAA+ lid domain; pfam17862"
                     /db_xref="CDD:465537"
     Region          <578..610
                     /region_name="Vps4_C"
                     /note="Vps4 C terminal oligomerization domain; pfam09336"
                     /db_xref="CDD:462762"
     CDS             1..614
                     /gene="SPAST"
                     /coded_by="XM_061155647.1:309..2153"
                     /db_xref="GeneID:133065030"
ORIGIN      
        1 mnspggrgkk kgsggpsspv pprppppcla rsrpapkpap ppqsphkrnl yyfsyplfvg
       61 fallrlvafh lgllfvwlcq rfsralmaak rssgaapasa sppapvpgge aervrafhkq
      121 afeyisvalr idedekvgqk dqavewykkg ieelekgiav vvtgqgeqce rarrlqakmm
      181 tnlvmakdrl qlleklqpsl qfsksqtdvy ndstnltcrn ghlqsesgav pkrkdpltha
      241 snslprsktv mktgptglsg hhrapscsgl smvsgvrqgp gsaaathkst pktsrtnkps
      301 tpttaarkkk dlknfrnvds nlanlimnei vdngtavkfd diagqelakq alqeivilps
      361 lrpelftglr aparglllfg ppgngktmla kavaaesnat ffnisaaslt skyvgegekl
      421 vralfavare lqpsiifide vdsllcerre gehdasrrlk tefliefdgv qsagddrvlv
      481 mgatnrpqel deavlrrftk rvyvslpnee trllllknll ckqgspltqk elaqlarmtd
      541 gysgsdltal akdaalgpir elkpeqvknm sasemrnirl sdfteslkki krsvspqtle
      601 ayirwnkdfg dttv
//
LOCUS       XP_061011631             613 aa            linear   MAM 02-DEC-2023
DEFINITION  spastin isoform X2 [Dama dama].
ACCESSION   XP_061011631
VERSION     XP_061011631.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155648.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..613
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..613
                     /product="spastin isoform X2"
                     /calculated_mol_wt=66940
     Region          114..192
                     /region_name="MIT_spastin"
                     /note="MIT: domain contained within Microtubule
                     Interacting and Trafficking molecules. This MIT domain
                     sub-family is found in the AAA protein spastin, a probable
                     ATPase involved in the assembly or function of nuclear
                     protein complexes; spastins might also be...; cd02679"
                     /db_xref="CDD:239142"
     Region          340..503
                     /region_name="RecA-like_spastin"
                     /note="ATPase domain of spastin; cd19524"
                     /db_xref="CDD:410932"
     Site            order(341..344,381..387)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:410932"
     Region          530..584
                     /region_name="AAA_lid_3"
                     /note="AAA+ lid domain; pfam17862"
                     /db_xref="CDD:465537"
     Region          <577..609
                     /region_name="Vps4_C"
                     /note="Vps4 C terminal oligomerization domain; pfam09336"
                     /db_xref="CDD:462762"
     CDS             1..613
                     /gene="SPAST"
                     /coded_by="XM_061155648.1:310..2151"
                     /db_xref="GeneID:133065030"
ORIGIN      
        1 mnspggrgkk kgsggpsspv pprppppcla rsrpapkpap ppqsphkrnl yyfsyplfvg
       61 fallrlvafh lgllfvwlcq rfsralmaak rssgaapasa sppapvpgge aervrafhkq
      121 afeyisvalr idedekgqkd qavewykkgi eelekgiavv vtgqgeqcer arrlqakmmt
      181 nlvmakdrlq lleklqpslq fsksqtdvyn dstnltcrng hlqsesgavp krkdplthas
      241 nslprsktvm ktgptglsgh hrapscsgls mvsgvrqgpg saaathkstp ktsrtnkpst
      301 pttaarkkkd lknfrnvdsn lanlimneiv dngtavkfdd iagqelakqa lqeivilpsl
      361 rpelftglra parglllfgp pgngktmlak avaaesnatf fnisaaslts kyvgegeklv
      421 ralfavarel qpsiifidev dsllcerreg ehdasrrlkt efliefdgvq sagddrvlvm
      481 gatnrpqeld eavlrrftkr vyvslpneet rllllknllc kqgspltqke laqlarmtdg
      541 ysgsdltala kdaalgpire lkpeqvknms asemrnirls dfteslkkik rsvspqtlea
      601 yirwnkdfgd ttv
//
LOCUS       XP_061011632             582 aa            linear   MAM 02-DEC-2023
DEFINITION  spastin isoform X3 [Dama dama].
ACCESSION   XP_061011632
VERSION     XP_061011632.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155649.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..582
                     /product="spastin isoform X3"
                     /calculated_mol_wt=63417
     Region          152..559
                     /region_name="SpoVK"
                     /note="AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell
                     wall/membrane/envelope biogenesis, Cell cycle control,
                     cell division, chromosome partitioning, Signal
                     transduction mechanisms]; COG0464"
                     /db_xref="CDD:440232"
     Region          309..472
                     /region_name="RecA-like_spastin"
                     /note="ATPase domain of spastin; cd19524"
                     /db_xref="CDD:410932"
     Site            order(310..313,350..356)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:410932"
     Region          <546..578
                     /region_name="Vps4_C"
                     /note="Vps4 C terminal oligomerization domain; pfam09336"
                     /db_xref="CDD:462762"
     CDS             1..582
                     /gene="SPAST"
                     /coded_by="XM_061155649.1:311..2059"
                     /db_xref="GeneID:133065030"
ORIGIN      
        1 mnspggrgkk kgsggpsspv pprppppcla rsrpapkpap ppqsphkrnl yyfsyplfvg
       61 fallrlvafh lgllfvwlcq rfsralmaak rssgaapasa sppapvpgge aervrafhkq
      121 afeyisvalr idedekvgqk dqavewykkg ieelekgiav vvtgqgeqce rarrlqakmm
      181 tnlvmakdrl qllesgavpk rkdplthasn slprsktvmk tgptglsghh rapscsglsm
      241 vsgvrqgpgs aaathkstpk tsrtnkpstp ttaarkkkdl knfrnvdsnl anlimneivd
      301 ngtavkfddi agqelakqal qeivilpslr pelftglrap arglllfgpp gngktmlaka
      361 vaaesnatff nisaasltsk yvgegeklvr alfavarelq psiifidevd sllcerrege
      421 hdasrrlkte fliefdgvqs agddrvlvmg atnrpqelde avlrrftkrv yvslpneetr
      481 llllknllck qgspltqkel aqlarmtdgy sgsdltalak daalgpirel kpeqvknmsa
      541 semrnirlsd fteslkkikr svspqtleay irwnkdfgdt tv
//
LOCUS       XP_061011633             581 aa            linear   MAM 02-DEC-2023
DEFINITION  spastin isoform X4 [Dama dama].
ACCESSION   XP_061011633
VERSION     XP_061011633.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155650.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..581
                     /product="spastin isoform X4"
                     /calculated_mol_wt=63318
     Region          151..558
                     /region_name="SpoVK"
                     /note="AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell
                     wall/membrane/envelope biogenesis, Cell cycle control,
                     cell division, chromosome partitioning, Signal
                     transduction mechanisms]; COG0464"
                     /db_xref="CDD:440232"
     Region          308..471
                     /region_name="RecA-like_spastin"
                     /note="ATPase domain of spastin; cd19524"
                     /db_xref="CDD:410932"
     Site            order(309..312,349..355)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:410932"
     Region          <545..577
                     /region_name="Vps4_C"
                     /note="Vps4 C terminal oligomerization domain; pfam09336"
                     /db_xref="CDD:462762"
     CDS             1..581
                     /gene="SPAST"
                     /coded_by="XM_061155650.1:311..2056"
                     /db_xref="GeneID:133065030"
ORIGIN      
        1 mnspggrgkk kgsggpsspv pprppppcla rsrpapkpap ppqsphkrnl yyfsyplfvg
       61 fallrlvafh lgllfvwlcq rfsralmaak rssgaapasa sppapvpgge aervrafhkq
      121 afeyisvalr idedekgqkd qavewykkgi eelekgiavv vtgqgeqcer arrlqakmmt
      181 nlvmakdrlq llesgavpkr kdplthasns lprsktvmkt gptglsghhr apscsglsmv
      241 sgvrqgpgsa aathkstpkt srtnkpstpt taarkkkdlk nfrnvdsnla nlimneivdn
      301 gtavkfddia gqelakqalq eivilpslrp elftglrapa rglllfgppg ngktmlakav
      361 aaesnatffn isaasltsky vgegeklvra lfavarelqp siifidevds llcerregeh
      421 dasrrlktef liefdgvqsa gddrvlvmga tnrpqeldea vlrrftkrvy vslpneetrl
      481 lllknllckq gspltqkela qlarmtdgys gsdltalakd aalgpirelk peqvknmsas
      541 emrnirlsdf teslkkikrs vspqtleayi rwnkdfgdtt v
//
LOCUS       XP_061011634              99 aa            linear   MAM 02-DEC-2023
DEFINITION  protein dpy-30 homolog [Dama dama].
ACCESSION   XP_061011634
VERSION     XP_061011634.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155651.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..99
                     /product="protein dpy-30 homolog"
                     /calculated_mol_wt=11119
     Region          53..92
                     /region_name="DD_DPY30_SDC1"
                     /note="dimerization/docking (D/D) domain found in the
                     DPY30/SDC1 family; cd22965"
                     /db_xref="CDD:438534"
     Site            order(53,56..57,60..61,64,69,72,76..77,80..82,84..85,
                     88..89)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:438534"
     Site            order(53..54,58..59,61..62,66,69..70,73..74)
                     /site_type="other"
                     /note="Bre2 binding site [polypeptide binding]"
                     /db_xref="CDD:438534"
     CDS             1..99
                     /gene="DPY30"
                     /coded_by="XM_061155651.1:137..436"
                     /db_xref="GeneID:133065031"
ORIGIN      
        1 mepeqmlegq tqvaenphse ygltdnveri venekinaek sskqkvdlqs lptrayldqt
       61 vvpillqgla vlakerppnp ieflasyllk nkaqfedrn
//
LOCUS       XP_061011635              99 aa            linear   MAM 02-DEC-2023
DEFINITION  protein dpy-30 homolog [Dama dama].
ACCESSION   XP_061011635
VERSION     XP_061011635.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155652.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..99
                     /product="protein dpy-30 homolog"
                     /calculated_mol_wt=11119
     Region          53..92
                     /region_name="DD_DPY30_SDC1"
                     /note="dimerization/docking (D/D) domain found in the
                     DPY30/SDC1 family; cd22965"
                     /db_xref="CDD:438534"
     Site            order(53,56..57,60..61,64,69,72,76..77,80..82,84..85,
                     88..89)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:438534"
     Site            order(53..54,58..59,61..62,66,69..70,73..74)
                     /site_type="other"
                     /note="Bre2 binding site [polypeptide binding]"
                     /db_xref="CDD:438534"
     CDS             1..99
                     /gene="DPY30"
                     /coded_by="XM_061155652.1:177..476"
                     /db_xref="GeneID:133065031"
ORIGIN      
        1 mepeqmlegq tqvaenphse ygltdnveri venekinaek sskqkvdlqs lptrayldqt
       61 vvpillqgla vlakerppnp ieflasyllk nkaqfedrn
//
LOCUS       XP_061011636             297 aa            linear   MAM 02-DEC-2023
DEFINITION  protein MEMO1 isoform X1 [Dama dama].
ACCESSION   XP_061011636
VERSION     XP_061011636.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155653.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..297
                     /product="protein MEMO1 isoform X1"
                     /calculated_mol_wt=33588
     Region          9..294
                     /region_name="MEMO_like"
                     /note="Memo (mediator of ErbB2-driven cell motility) is
                     co-precipitated with the C terminus of ErbB2, a protein
                     involved in cell motility; cd07361"
                     /db_xref="CDD:153373"
     Site            order(16,49,81,131,189,192,244)
                     /site_type="active"
                     /note="putative ligand binding pocket/active site
                     [active]"
                     /db_xref="CDD:153373"
     Site            order(49,81)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:153373"
     CDS             1..297
                     /gene="MEMO1"
                     /coded_by="XM_061155653.1:72..965"
                     /db_xref="GeneID:133065033"
ORIGIN      
        1 msnrvvcrea shagswytas gpqlnaqleg wlsqvqstkr paraiiapha gytycgscaa
       61 haykqvdpsi trrvfilgps hhvplsrcal ssvdiyrtpl ydlridqkiy gelwktgmfe
      121 rmslqtdede hsiemhlpyt akameshkde ftiipvlvga lseskeqefg klfskyladp
      181 snlfvvssdf chwgqrfrys yydesqgeiy rsiehldkmg msiieqldpv sfsnylkkyh
      241 nticgrhpig vllnaitelq kngmnmsfsf lnyaqssqcr nwqdssvsya agaltvh
//
LOCUS       XP_061011637             274 aa            linear   MAM 02-DEC-2023
DEFINITION  protein MEMO1 isoform X2 [Dama dama].
ACCESSION   XP_061011637
VERSION     XP_061011637.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155654.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..274
                     /product="protein MEMO1 isoform X2"
                     /calculated_mol_wt=31162
     Region          9..271
                     /region_name="MEMO_like"
                     /note="Memo (mediator of ErbB2-driven cell motility) is
                     co-precipitated with the C terminus of ErbB2, a protein
                     involved in cell motility; cd07361"
                     /db_xref="CDD:153373"
     Site            order(16,58,108,166,169,221)
                     /site_type="active"
                     /note="putative ligand binding pocket/active site
                     [active]"
                     /db_xref="CDD:153373"
     CDS             1..274
                     /gene="MEMO1"
                     /coded_by="XM_061155654.1:298..1122"
                     /db_xref="GeneID:133065033"
ORIGIN      
        1 msnrvvcrea shagswytas gpqlnaqleg wlsqvqstkr paraiiaprr vfilgpshhv
       61 plsrcalssv diyrtplydl ridqkiygel wktgmferms lqtdedehsi emhlpytaka
      121 meshkdefti ipvlvgalse skeqefgklf skyladpsnl fvvssdfchw gqrfrysyyd
      181 esqgeiyrsi ehldkmgmsi ieqldpvsfs nylkkyhnti cgrhpigvll naitelqkng
      241 mnmsfsflny aqssqcrnwq dssvsyaaga ltvh
//
LOCUS       XP_061011638             199 aa            linear   MAM 02-DEC-2023
DEFINITION  protein MEMO1 isoform X3 [Dama dama].
ACCESSION   XP_061011638
VERSION     XP_061011638.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155655.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..199
                     /product="protein MEMO1 isoform X3"
                     /calculated_mol_wt=22369
     Region          9..196
                     /region_name="MEMO_like"
                     /note="Memo (mediator of ErbB2-driven cell motility) is
                     co-precipitated with the C terminus of ErbB2, a protein
                     involved in cell motility; cd07361"
                     /db_xref="CDD:153373"
     CDS             1..199
                     /gene="MEMO1"
                     /coded_by="XM_061155655.1:299..898"
                     /db_xref="GeneID:133065033"
ORIGIN      
        1 msnrvvcrea shagswytas gpqlnaqleg wlsqvqstkr paraiiaphk deftiipvlv
       61 galseskeqe fgklfskyla dpsnlfvvss dfchwgqrfr ysyydesqge iyrsiehldk
      121 mgmsiieqld pvsfsnylkk yhnticgrhp igvllnaite lqkngmnmsf sflnyaqssq
      181 crnwqdssvs yaagaltvh
//
LOCUS       XP_061011639             201 aa            linear   MAM 02-DEC-2023
DEFINITION  protein MEMO1 isoform X4 [Dama dama].
ACCESSION   XP_061011639
VERSION     XP_061011639.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155656.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..201
                     /product="protein MEMO1 isoform X4"
                     /calculated_mol_wt=23004
     Region          <114..198
                     /region_name="Extradiol_Dioxygenase_3B_like"
                     /note="Subunit B of Class III Extradiol ring-cleavage
                     dioxygenases; cl00599"
                     /db_xref="CDD:444999"
     CDS             1..201
                     /gene="MEMO1"
                     /coded_by="XM_061155656.1:1..606"
                     /db_xref="GeneID:133065033"
ORIGIN      
        1 mqgirtvglv llmltnkwih llpgefsslg llimcpflav hspvwtyigh lcmtfvltkr
       61 ftenygrqec lnaclcrqmk mntvlkcicl iqlkpwkgqr frysyydesq geiyrsiehl
      121 dkmgmsiieq ldpvsfsnyl kkyhnticgr hpigvllnai telqkngmnm sfsflnyaqs
      181 sqcrnwqdss vsyaagaltv h
//
LOCUS       XP_061011640             152 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM136A [Dama dama].
ACCESSION   XP_061011640
VERSION     XP_061011640.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155657.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..152
                     /product="protein FAM136A"
                     /calculated_mol_wt=17064
     Region          19..141
                     /region_name="DUF842"
                     /note="Eukaryotic protein of unknown function (DUF842);
                     pfam05811"
                     /db_xref="CDD:461747"
     CDS             1..152
                     /gene="FAM136A"
                     /coded_by="XM_061155657.1:36..494"
                     /db_xref="GeneID:133065034"
ORIGIN      
        1 mwapaqpgta rvamaelqqq lrvqeavdsm vkslerenir kmqglmfrcs aacceeshas
       61 mqqvhqcier chaplaqaqa lvtselekfq drlarctmyc ndkardsida gskelqvkrq
      121 letcvtkcvd dhmnliptmt rkmkeslssm gk
//
LOCUS       XP_061011641             219 aa            linear   MAM 02-DEC-2023
DEFINITION  protransforming growth factor alpha isoform X1 [Dama dama].
ACCESSION   XP_061011641
VERSION     XP_061011641.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155658.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..219
                     /product="protransforming growth factor alpha isoform X1"
                     /calculated_mol_wt=23952
     Region          <44..83
                     /region_name="PHA02887"
                     /note="EGF-like protein; Provisional"
                     /db_xref="CDD:165214"
     Region          <54..121
                     /region_name="PHA03099"
                     /note="epidermal growth factor-like protein (EGF-like
                     protein); Provisional"
                     /db_xref="CDD:165381"
     CDS             1..219
                     /gene="TGFA"
                     /coded_by="XM_061155658.1:83..742"
                     /db_xref="GeneID:133065035"
ORIGIN      
        1 mvtsagqlal falgiflavc qalenstssl sadppvaaav vshfndcpds hrqfcfhgtc
       61 rflvqeekpa cvchsgyvga rcehadllav vaasqkkqai talvvvsiva lavliitcvl
      121 ihccevrkhc ewcralvcrh ekpsallkgr tacchsetge eaasrevlgr hcwvekrstf
      181 sksgqkfleg eaerrekkkr tfilpsqiqf ipmclslrr
//
LOCUS       XP_061011642             218 aa            linear   MAM 02-DEC-2023
DEFINITION  protransforming growth factor alpha isoform X2 [Dama dama].
ACCESSION   XP_061011642
VERSION     XP_061011642.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155659.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..218
                     /product="protransforming growth factor alpha isoform X2"
                     /calculated_mol_wt=23881
     Region          <43..82
                     /region_name="PHA02887"
                     /note="EGF-like protein; Provisional"
                     /db_xref="CDD:165214"
     Region          <53..120
                     /region_name="PHA03099"
                     /note="epidermal growth factor-like protein (EGF-like
                     protein); Provisional"
                     /db_xref="CDD:165381"
     CDS             1..218
                     /gene="TGFA"
                     /coded_by="XM_061155659.1:83..739"
                     /db_xref="GeneID:133065035"
ORIGIN      
        1 mvtsagqlal falgiflavc qalenstssl sdppvaaavv shfndcpdsh rqfcfhgtcr
       61 flvqeekpac vchsgyvgar cehadllavv aasqkkqait alvvvsival avliitcvli
      121 hccevrkhce wcralvcrhe kpsallkgrt acchsetgee aasrevlgrh cwvekrstfs
      181 ksgqkflege aerrekkkrt filpsqiqfi pmclslrr
//
LOCUS       XP_061011643             160 aa            linear   MAM 02-DEC-2023
DEFINITION  protransforming growth factor alpha isoform X3 [Dama dama].
ACCESSION   XP_061011643
VERSION     XP_061011643.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155660.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..160
                     /product="protransforming growth factor alpha isoform X3"
                     /calculated_mol_wt=17001
     Region          <44..83
                     /region_name="PHA02887"
                     /note="EGF-like protein; Provisional"
                     /db_xref="CDD:165214"
     Region          <54..121
                     /region_name="PHA03099"
                     /note="epidermal growth factor-like protein (EGF-like
                     protein); Provisional"
                     /db_xref="CDD:165381"
     CDS             1..160
                     /gene="TGFA"
                     /coded_by="XM_061155660.1:83..565"
                     /db_xref="GeneID:133065035"
ORIGIN      
        1 mvtsagqlal falgiflavc qalenstssl sadppvaaav vshfndcpds hrqfcfhgtc
       61 rflvqeekpa cvchsgyvga rcehadllav vaasqkkqai talvvvsiva lavliitcvl
      121 ihccevrkhc ewcralvcrh ekpsallkgr tacchsetvv
//
LOCUS       XP_061011644             724 aa            linear   MAM 02-DEC-2023
DEFINITION  beta-adducin [Dama dama].
ACCESSION   XP_061011644
VERSION     XP_061011644.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155661.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..724
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..724
                     /product="beta-adducin"
                     /calculated_mol_wt=80398
     Region          130..340
                     /region_name="Aldolase_II"
                     /note="Class II Aldolase and Adducin head (N-terminal)
                     domain. Aldolases are ubiquitous enzymes catalyzing
                     central steps of carbohydrate metabolism. Based on
                     enzymatic mechanisms, this superfamily has been divided
                     into two distinct classes (Class I and II); cd00398"
                     /db_xref="CDD:238232"
     Site            order(139,143,155,176,178..179,229,231..232,237..239,247,
                     249..250,261,289,300,307,311,318,336)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238232"
     Site            order(160,173..174,199..201,227,229,290)
                     /site_type="active"
                     /db_xref="CDD:238232"
     Site            order(227,229,290)
                     /site_type="other"
                     /note="Zn2+ binding site [ion binding]"
                     /db_xref="CDD:238232"
     Region          <581..>663
                     /region_name="rad23"
                     /note="UV excision repair protein Rad23; TIGR00601"
                     /db_xref="CDD:273167"
     CDS             1..724
                     /gene="ADD2"
                     /coded_by="XM_061155661.1:443..2617"
                     /db_xref="GeneID:133065037"
ORIGIN      
        1 mseeavpeaa spppaqgqqy fdrfseddpe ylrlrnraad lrqdfnlmeq kkrvtmilqs
       61 psfreelegl iqeqmkkgnn ssniwalrqi adfmastsha vfptssmnfs mmtpindlht
      121 adslnlakge rlmrckissv yrlldlygwa qlsdtyvtlr vskeqdhfli spkgvscsev
      181 tasslikvni lgevvekgss cfpvdttgfc lhsaiyaarp dvrciihlht pataavsamk
      241 wgllpvshda llvgdmayyd fngemeqead rinlqkclgp tckilvlrnh gvvalgdtve
      301 eafykifhlq aaceiqvsal ssaggvenli lleqekhrph evgsvqwags tfgpmqksrl
      361 gehefealmr mldnlgyrtg ytyrypfvqe ktkhksevei patvtafvfe edgapvpalr
      421 qhaqkqqkek trwlntpnty lrvnvadevq rsmgsprpkt twmkadevek sssgmpirie
      481 npnqfvplyt dpqevldmrn kireqnrqdv ksagpqsqll asviaeksrs pstdsqlmsq
      541 gqadakdese etapnpfsql tdqeleeykk everkklele gekepapeep gspvksapas
      601 paqspaksep kspagspaks vdeepkltet skattepevt qpegvvvngr edeqtvedtl
      661 skglsqmttn adtdvdtskd ktesvtsgpm spegspsksp skkkkkfrtp sflkkskkke
      721 kves
//
LOCUS       XP_061011645             329 aa            linear   MAM 02-DEC-2023
DEFINITION  C-type lectin domain family 4 member K [Dama dama].
ACCESSION   XP_061011645
VERSION     XP_061011645.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155662.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..329
                     /product="C-type lectin domain family 4 member K"
                     /calculated_mol_wt=36832
     Region          47..>196
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          112..>176
                     /region_name="Phage_GP20"
                     /note="Phage minor structural protein GP20; pfam06810"
                     /db_xref="CDD:429131"
     Region          197..322
                     /region_name="CLECT_DC-SIGN_like"
                     /note="C-type lectin-like domain (CTLD) of the type found
                     in human dendritic cell (DC)-specific intercellular
                     adhesion molecule 3-grabbing non-integrin (DC-SIGN) and
                     the related receptor, DC-SIGN receptor (DC-SIGNR);
                     cd03590"
                     /db_xref="CDD:153060"
     Site            order(251,286,288,294,300..301,308..311)
                     /site_type="other"
                     /note="carbohydrate binding site"
                     /db_xref="CDD:153060"
     Site            order(258,262,289,294..295)
                     /site_type="other"
                     /note="calcium binding site 1 [ion binding]"
                     /db_xref="CDD:153060"
     Site            order(262,295)
                     /site_type="other"
                     /note="calcium binding site 3 [ion binding]"
                     /db_xref="CDD:153060"
     CDS             1..329
                     /gene="CD207"
                     /coded_by="XM_061155662.1:342..1331"
                     /db_xref="GeneID:133065038"
ORIGIN      
        1 mktadsevld ahftvdkqnv slwpqdpppk tcpsqvlgrl ltvrtvvvfl tlvmvtsvll
       61 qailypwfmg tisdvktnaq llkarvdnis slsseikrnr gglvavgiqv qvvnasldri
      121 ssqirrletg lkeasaqlqv lasswkavde lnaqipelkq dldkasalna kvrelqsgle
      181 siskllqqqn dilqvvsqgw kyfrghfyyf sqisktwysa qqicisrnsh ltsvtseseq
      241 eflyrtaggl pywigltkag segdwhwvdg tpynkvqsek fwipgepnny gnnehcvnlk
      301 tsalrswnda scdntflfic krsykpsdp
//
LOCUS       XP_061011646             196 aa            linear   MAM 02-DEC-2023
DEFINITION  protein TEX261 [Dama dama].
ACCESSION   XP_061011646
VERSION     XP_061011646.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155663.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..196
                     /product="protein TEX261"
                     /calculated_mol_wt=22455
     Region          1..186
                     /region_name="Erv26"
                     /note="Transmembrane adaptor Erv26; pfam04148"
                     /db_xref="CDD:461197"
     CDS             1..196
                     /gene="TEX261"
                     /coded_by="XM_061155663.1:94..684"
                     /db_xref="GeneID:133065039"
ORIGIN      
        1 mwfmyvlswl slfiqvafit lavaaglyyl aelieeytva tsriikymiw fstavlvgly
       61 vferfptymi gvglftnlvy fgllqtfpfi mltspnfils cglvvvnhyl afqffaeeyy
      121 pfsevlayft fclwiipfaf fvslsagenv lpstmqpgdd vvsnyftkgk rgkrlgilvv
      181 fsfikeailp srqkiy
//
LOCUS       XP_061011647             344 aa            linear   MAM 02-DEC-2023
DEFINITION  N-acetyl-D-glucosamine kinase isoform X1 [Dama dama].
ACCESSION   XP_061011647
VERSION     XP_061011647.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155664.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..344
                     /product="N-acetyl-D-glucosamine kinase isoform X1"
                     /calculated_mol_wt=37252
     Region          4..322
                     /region_name="ASKHA_NBD_NAGK_meta"
                     /note="nucleotide-binding domain (NBD) of
                     N-acetyl-D-glucosamine kinase (NAGK) and similar proteins;
                     cd24078"
                     /db_xref="CDD:466928"
     CDS             1..344
                     /gene="NAGK"
                     /coded_by="XM_061155664.1:117..1151"
                     /db_xref="GeneID:133065040"
ORIGIN      
        1 mvalyggveg ggtrskvlll sedgkilaea dglstnhwli gtdkcverin emvnrakrka
       61 gvdplvplrs lglslsggdq edavrmlmee lrdrfpylse sylittdaag siatatpdgg
      121 ivlisgtgsn crlinpdgse sgcggwghmm gdegsaywia hqavkivfds idnleaaphd
      181 igyvkqamfn yfqvpdrlgi lthlyrdfdk crfagfcrkv aegaqqgdpl sryifrkage
      241 mlgrhvvavl peidpvlfqg emglpilcvg svwkswellk egfllaltqg reiqaqnsfs
      301 gftllklrhs salgaaslga rhighllpmd ysanaiafys ytfs
//
LOCUS       XP_061011648             324 aa            linear   MAM 02-DEC-2023
DEFINITION  N-acetyl-D-glucosamine kinase isoform X2 [Dama dama].
ACCESSION   XP_061011648
VERSION     XP_061011648.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155665.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..324
                     /product="N-acetyl-D-glucosamine kinase isoform X2"
                     /calculated_mol_wt=35141
     Region          4..281
                     /region_name="ASKHA_NBD_NAGK_meta"
                     /note="nucleotide-binding domain (NBD) of
                     N-acetyl-D-glucosamine kinase (NAGK) and similar proteins;
                     cd24078"
                     /db_xref="CDD:466928"
     CDS             1..324
                     /gene="NAGK"
                     /coded_by="XM_061155665.1:118..1092"
                     /db_xref="GeneID:133065040"
ORIGIN      
        1 mvalyggveg ggtrskvlll sedgkilaea dglstnhwli gtdkcverin emvnrakrka
       61 gvdplvplrs lglslsggdq edavrmlmee lrdrfpylse sylittdaag siatatpdgg
      121 ivlisgtgsn crlinpdgse sgcggwghmm gdegsaywia hqavkivfds idnleaaphd
      181 igyvkqamfn yfqvpdrlgi lthlyrdfdk crfagfcrkv aegaqqgdpl sryifrkage
      241 mlgrhvvavl peidpvlfqg emglpilcvg svwkswellk eerskfcpgt gkitpilqaq
      301 gfpvnhlcsk vltllpillp cikc
//
LOCUS       XP_061011649             311 aa            linear   MAM 02-DEC-2023
DEFINITION  N-acetyl-D-glucosamine kinase isoform X3 [Dama dama].
ACCESSION   XP_061011649
VERSION     XP_061011649.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155666.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..311
                     /product="N-acetyl-D-glucosamine kinase isoform X3"
                     /calculated_mol_wt=33733
     Region          4..281
                     /region_name="ASKHA_NBD_NAGK_meta"
                     /note="nucleotide-binding domain (NBD) of
                     N-acetyl-D-glucosamine kinase (NAGK) and similar proteins;
                     cd24078"
                     /db_xref="CDD:466928"
     CDS             1..311
                     /gene="NAGK"
                     /coded_by="XM_061155666.1:118..1053"
                     /db_xref="GeneID:133065040"
ORIGIN      
        1 mvalyggveg ggtrskvlll sedgkilaea dglstnhwli gtdkcverin emvnrakrka
       61 gvdplvplrs lglslsggdq edavrmlmee lrdrfpylse sylittdaag siatatpdgg
      121 ivlisgtgsn crlinpdgse sgcggwghmm gdegsaywia hqavkivfds idnleaaphd
      181 igyvkqamfn yfqvpdrlgi lthlyrdfdk crfagfcrkv aegaqqgdpl sryifrkage
      241 mlgrhvvavl peidpvlfqg emglpilcvg svwkswellk eerskfcpgt gkitpilqaq
      301 gfpvnhlcsk l
//
LOCUS       XP_061011650             298 aa            linear   MAM 02-DEC-2023
DEFINITION  N-acetyl-D-glucosamine kinase isoform X4 [Dama dama].
ACCESSION   XP_061011650
VERSION     XP_061011650.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155667.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..298
                     /product="N-acetyl-D-glucosamine kinase isoform X4"
                     /calculated_mol_wt=32374
     Region          4..285
                     /region_name="ASKHA_NBD_NAGK_meta"
                     /note="nucleotide-binding domain (NBD) of
                     N-acetyl-D-glucosamine kinase (NAGK) and similar proteins;
                     cd24078"
                     /db_xref="CDD:466928"
     CDS             1..298
                     /gene="NAGK"
                     /coded_by="XM_061155667.1:118..1014"
                     /db_xref="GeneID:133065040"
ORIGIN      
        1 mvalyggveg ggtrskvlll sedgkilaea dglstnhwli gtdkcverin emvnrakrka
       61 gvdplvplrs lglslsggdq edavrmlmee lrdrfpylse sylittdaag siatatpdgg
      121 ivlisgtgsn crlinpdgse sgcggwghmm gdegsaywia hqavkivfds idnleaaphd
      181 igyvkqamfn yfqvpdrlgi lthlyrdfdk crfagfcrkv aegaqqgdpl sryifrkage
      241 mlgrhvvavl peidpvlfqg emglpilcvg svwkswellk egkqqfavll legvlkrl
//
LOCUS       XP_061011651             291 aa            linear   MAM 02-DEC-2023
DEFINITION  N-acetyl-D-glucosamine kinase isoform X5 [Dama dama].
ACCESSION   XP_061011651
VERSION     XP_061011651.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155668.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..291
                     /product="N-acetyl-D-glucosamine kinase isoform X5"
                     /calculated_mol_wt=31539
     Region          4..281
                     /region_name="ASKHA_NBD_NAGK_meta"
                     /note="nucleotide-binding domain (NBD) of
                     N-acetyl-D-glucosamine kinase (NAGK) and similar proteins;
                     cd24078"
                     /db_xref="CDD:466928"
     CDS             1..291
                     /gene="NAGK"
                     /coded_by="XM_061155668.1:118..993"
                     /db_xref="GeneID:133065040"
ORIGIN      
        1 mvalyggveg ggtrskvlll sedgkilaea dglstnhwli gtdkcverin emvnrakrka
       61 gvdplvplrs lglslsggdq edavrmlmee lrdrfpylse sylittdaag siatatpdgg
      121 ivlisgtgsn crlinpdgse sgcggwghmm gdegsaywia hqavkivfds idnleaaphd
      181 igyvkqamfn yfqvpdrlgi lthlyrdfdk crfagfcrkv aegaqqgdpl sryifrkage
      241 mlgrhvvavl peidpvlfqg emglpilcvg svwkswellk evvglswwss g
//
LOCUS       XP_061011653             123 aa            linear   MAM 02-DEC-2023
DEFINITION  polyadenylate-binding protein-interacting protein 2B [Dama dama].
ACCESSION   XP_061011653
VERSION     XP_061011653.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155670.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..123
                     /product="polyadenylate-binding protein-interacting
                     protein 2B"
                     /calculated_mol_wt=14090
     Region          106..122
                     /region_name="PAM2"
                     /note="Ataxin-2 C-terminal region; pfam07145"
                     /db_xref="CDD:429316"
     CDS             1..123
                     /gene="PAIP2B"
                     /coded_by="XM_061155670.1:192..563"
                     /db_xref="GeneID:133065042"
ORIGIN      
        1 mngssvants ssikskedqv lnghdekenp faeymwmene edfnrqveee lqeqefldrc
       61 fqemldeedq dwfipsrdlp qamgqlqqql nglsvsdghd sedilsksnl npdakefipg
      121 vky
//
LOCUS       XP_061011654            1971 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 638 isoform X1 [Dama dama].
ACCESSION   XP_061011654
VERSION     XP_061011654.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155671.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1971
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1971
                     /product="zinc finger protein 638 isoform X1"
                     /calculated_mol_wt=219020
     Region          674..748
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          760..>903
                     /region_name="PRK13914"
                     /note="invasion associated endopeptidase"
                     /db_xref="CDD:237555"
     Region          901..975
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          1005..1078
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          1920..1952
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     CDS             1..1971
                     /gene="ZNF638"
                     /coded_by="XM_061155671.1:312..6227"
                     /db_xref="GeneID:133065044"
ORIGIN      
        1 msrprfnprg nfplqrprap npsemrppgp fmrpgsmglp rfypagrarg iphrfaches
       61 yqnmepqrmn vqvtqhqtdp rltkekldfh eaqqkkekph gsrwddephi sasvgvkqss
      121 vtqvteqspk vqsrytkesa ssilasfgls nedleelsry pdeqltpenm plilrdirmr
      181 kmgrrlpnlp srsrnketlg neavssnvid yghaskygyt edplevriyd peiptdeved
      241 efrsqpsisa svpapnvmcn smfpvedvfr qmdfpsessn nqsffpvesg skmsglhisr
      301 gqsvlepvks vsqsisqtvn qtmsqslipp pmnqqpfsse listvsqqer iprdpvinss
      361 nvhgsggskk nyqseadipi qspfgivkas wlpkfshada qkmkrlptps mmndyyaasp
      421 rifphlcslc nvecshlkdw iqhqntsthi escrqlrqqy pdwnpeilps rrnegnrken
      481 etprgrshsp sprhsrrsss shrfrrsrsp vrcmyrprsr sprichrfip ryrsrsrspy
      541 rmrnpfrgsp kcfrsvsper tsrrserssd rkkaledviq rsghesefsk qkhleavdkg
      601 pspaqklktg sgakmsvkst ssaksdsnig ghctrhksks legdttpesk qmadktvslq
      661 rklrkdqssh ygpvllisdl pedgcteeei rkifqpfgkv ndilivpyrk eaylemefke
      721 aitavmeyie ttpllikgks vkvcvpgkkk sqnkevkkkm sdskktsasi lkkdtdasta
      781 vetvtaasat ksgqtktsat kvnkssgksa gsvksvvtva akgnkasikt akssgkksle
      841 ikkaglvknk dtsksvnvpe ssemktnvev kttengaket isaaveaten epvsketeem
      901 clvlisdlps kgysveevsn lvkpfgglkd ililsshkka fieinrksad smvkfytcfp
      961 ismdgnqlsi smapenmnlk deeaifttli rendpevnvd kiydrfvhlg nlpedglqcv
     1021 lcvglqfgkv dhhvymsnkn kailqldspe saqsmysflk qnpqnigdhv lsctlspkmd
     1081 ssevkaekdp elgkespdlk nspvdesevq taadspsikp seveeesvpn vqtgtfiqqk
     1141 epfeeepekt lcvsdfalet fevetqgeev kveiplgast sasidlften vgdsvlnqqv
     1201 ytsdfekeet eiinpetels tcdntfieek nikgiledsp seadffsgit qsvieavaev
     1261 dkqetvseiv pstcavalvp gistgdeqav stkgisektn mdekeeneln tkearmdlki
     1321 grekaekndr mvtekldkvl aavkekpaen svtkacpnkt vvqankpdet gkisvlvass
     1381 asssksgika dvvsstkaka tasksenqks flksvlrdqi naekrlsake sgllkatsar
     1441 sglaensskl kpiqsgvtrg ssgrisalqg kdskldyrdv tkqpqeteak psvmkrddsn
     1501 nktltgqntk npknttgrss kskeeplfpf nldefvtvde vieevnpfqv kqnplkgkrk
     1561 ealkntpsse lnlkkkkgki saprvvegel sfvtldeige eedaaaqlaq alvtvdevid
     1621 eddinvedmv knsnslltld elidqddcis hsetkdvtvl svaeeqdllk qerlvtvdei
     1681 geveelplne sadisfaaln tkgeegntgr dsigfissqm pedpstlvtv deiqddssdl
     1741 hlvtldevte ededsladfn nlkeelnfvt vdevgeeedg dndlkieltq rkndhpadkr
     1801 gdrkkrtvdk kktklealsq vgpinenime enpktmierr ssatvptkrv rigkmppsek
     1861 avtmepakde eafqisevge esgledsepe qkrkkiedss grsvapdvpe dldflvpkag
     1921 ffcpicslfy sdekamtnhc kstrhkqnte kfmakqrkek eqneaeerss r
//
LOCUS       XP_061011655            1971 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 638 isoform X1 [Dama dama].
ACCESSION   XP_061011655
VERSION     XP_061011655.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155672.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1971
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1971
                     /product="zinc finger protein 638 isoform X1"
                     /calculated_mol_wt=219020
     Region          674..748
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          760..>903
                     /region_name="PRK13914"
                     /note="invasion associated endopeptidase"
                     /db_xref="CDD:237555"
     Region          901..975
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          1005..1078
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          1920..1952
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     CDS             1..1971
                     /gene="ZNF638"
                     /coded_by="XM_061155672.1:335..6250"
                     /db_xref="GeneID:133065044"
ORIGIN      
        1 msrprfnprg nfplqrprap npsemrppgp fmrpgsmglp rfypagrarg iphrfaches
       61 yqnmepqrmn vqvtqhqtdp rltkekldfh eaqqkkekph gsrwddephi sasvgvkqss
      121 vtqvteqspk vqsrytkesa ssilasfgls nedleelsry pdeqltpenm plilrdirmr
      181 kmgrrlpnlp srsrnketlg neavssnvid yghaskygyt edplevriyd peiptdeved
      241 efrsqpsisa svpapnvmcn smfpvedvfr qmdfpsessn nqsffpvesg skmsglhisr
      301 gqsvlepvks vsqsisqtvn qtmsqslipp pmnqqpfsse listvsqqer iprdpvinss
      361 nvhgsggskk nyqseadipi qspfgivkas wlpkfshada qkmkrlptps mmndyyaasp
      421 rifphlcslc nvecshlkdw iqhqntsthi escrqlrqqy pdwnpeilps rrnegnrken
      481 etprgrshsp sprhsrrsss shrfrrsrsp vrcmyrprsr sprichrfip ryrsrsrspy
      541 rmrnpfrgsp kcfrsvsper tsrrserssd rkkaledviq rsghesefsk qkhleavdkg
      601 pspaqklktg sgakmsvkst ssaksdsnig ghctrhksks legdttpesk qmadktvslq
      661 rklrkdqssh ygpvllisdl pedgcteeei rkifqpfgkv ndilivpyrk eaylemefke
      721 aitavmeyie ttpllikgks vkvcvpgkkk sqnkevkkkm sdskktsasi lkkdtdasta
      781 vetvtaasat ksgqtktsat kvnkssgksa gsvksvvtva akgnkasikt akssgkksle
      841 ikkaglvknk dtsksvnvpe ssemktnvev kttengaket isaaveaten epvsketeem
      901 clvlisdlps kgysveevsn lvkpfgglkd ililsshkka fieinrksad smvkfytcfp
      961 ismdgnqlsi smapenmnlk deeaifttli rendpevnvd kiydrfvhlg nlpedglqcv
     1021 lcvglqfgkv dhhvymsnkn kailqldspe saqsmysflk qnpqnigdhv lsctlspkmd
     1081 ssevkaekdp elgkespdlk nspvdesevq taadspsikp seveeesvpn vqtgtfiqqk
     1141 epfeeepekt lcvsdfalet fevetqgeev kveiplgast sasidlften vgdsvlnqqv
     1201 ytsdfekeet eiinpetels tcdntfieek nikgiledsp seadffsgit qsvieavaev
     1261 dkqetvseiv pstcavalvp gistgdeqav stkgisektn mdekeeneln tkearmdlki
     1321 grekaekndr mvtekldkvl aavkekpaen svtkacpnkt vvqankpdet gkisvlvass
     1381 asssksgika dvvsstkaka tasksenqks flksvlrdqi naekrlsake sgllkatsar
     1441 sglaensskl kpiqsgvtrg ssgrisalqg kdskldyrdv tkqpqeteak psvmkrddsn
     1501 nktltgqntk npknttgrss kskeeplfpf nldefvtvde vieevnpfqv kqnplkgkrk
     1561 ealkntpsse lnlkkkkgki saprvvegel sfvtldeige eedaaaqlaq alvtvdevid
     1621 eddinvedmv knsnslltld elidqddcis hsetkdvtvl svaeeqdllk qerlvtvdei
     1681 geveelplne sadisfaaln tkgeegntgr dsigfissqm pedpstlvtv deiqddssdl
     1741 hlvtldevte ededsladfn nlkeelnfvt vdevgeeedg dndlkieltq rkndhpadkr
     1801 gdrkkrtvdk kktklealsq vgpinenime enpktmierr ssatvptkrv rigkmppsek
     1861 avtmepakde eafqisevge esgledsepe qkrkkiedss grsvapdvpe dldflvpkag
     1921 ffcpicslfy sdekamtnhc kstrhkqnte kfmakqrkek eqneaeerss r
//
LOCUS       XP_061011656            1971 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 638 isoform X1 [Dama dama].
ACCESSION   XP_061011656
VERSION     XP_061011656.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155673.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1971
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1971
                     /product="zinc finger protein 638 isoform X1"
                     /calculated_mol_wt=219020
     Region          674..748
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          760..>903
                     /region_name="PRK13914"
                     /note="invasion associated endopeptidase"
                     /db_xref="CDD:237555"
     Region          901..975
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          1005..1078
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          1920..1952
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     CDS             1..1971
                     /gene="ZNF638"
                     /coded_by="XM_061155673.1:323..6238"
                     /db_xref="GeneID:133065044"
ORIGIN      
        1 msrprfnprg nfplqrprap npsemrppgp fmrpgsmglp rfypagrarg iphrfaches
       61 yqnmepqrmn vqvtqhqtdp rltkekldfh eaqqkkekph gsrwddephi sasvgvkqss
      121 vtqvteqspk vqsrytkesa ssilasfgls nedleelsry pdeqltpenm plilrdirmr
      181 kmgrrlpnlp srsrnketlg neavssnvid yghaskygyt edplevriyd peiptdeved
      241 efrsqpsisa svpapnvmcn smfpvedvfr qmdfpsessn nqsffpvesg skmsglhisr
      301 gqsvlepvks vsqsisqtvn qtmsqslipp pmnqqpfsse listvsqqer iprdpvinss
      361 nvhgsggskk nyqseadipi qspfgivkas wlpkfshada qkmkrlptps mmndyyaasp
      421 rifphlcslc nvecshlkdw iqhqntsthi escrqlrqqy pdwnpeilps rrnegnrken
      481 etprgrshsp sprhsrrsss shrfrrsrsp vrcmyrprsr sprichrfip ryrsrsrspy
      541 rmrnpfrgsp kcfrsvsper tsrrserssd rkkaledviq rsghesefsk qkhleavdkg
      601 pspaqklktg sgakmsvkst ssaksdsnig ghctrhksks legdttpesk qmadktvslq
      661 rklrkdqssh ygpvllisdl pedgcteeei rkifqpfgkv ndilivpyrk eaylemefke
      721 aitavmeyie ttpllikgks vkvcvpgkkk sqnkevkkkm sdskktsasi lkkdtdasta
      781 vetvtaasat ksgqtktsat kvnkssgksa gsvksvvtva akgnkasikt akssgkksle
      841 ikkaglvknk dtsksvnvpe ssemktnvev kttengaket isaaveaten epvsketeem
      901 clvlisdlps kgysveevsn lvkpfgglkd ililsshkka fieinrksad smvkfytcfp
      961 ismdgnqlsi smapenmnlk deeaifttli rendpevnvd kiydrfvhlg nlpedglqcv
     1021 lcvglqfgkv dhhvymsnkn kailqldspe saqsmysflk qnpqnigdhv lsctlspkmd
     1081 ssevkaekdp elgkespdlk nspvdesevq taadspsikp seveeesvpn vqtgtfiqqk
     1141 epfeeepekt lcvsdfalet fevetqgeev kveiplgast sasidlften vgdsvlnqqv
     1201 ytsdfekeet eiinpetels tcdntfieek nikgiledsp seadffsgit qsvieavaev
     1261 dkqetvseiv pstcavalvp gistgdeqav stkgisektn mdekeeneln tkearmdlki
     1321 grekaekndr mvtekldkvl aavkekpaen svtkacpnkt vvqankpdet gkisvlvass
     1381 asssksgika dvvsstkaka tasksenqks flksvlrdqi naekrlsake sgllkatsar
     1441 sglaensskl kpiqsgvtrg ssgrisalqg kdskldyrdv tkqpqeteak psvmkrddsn
     1501 nktltgqntk npknttgrss kskeeplfpf nldefvtvde vieevnpfqv kqnplkgkrk
     1561 ealkntpsse lnlkkkkgki saprvvegel sfvtldeige eedaaaqlaq alvtvdevid
     1621 eddinvedmv knsnslltld elidqddcis hsetkdvtvl svaeeqdllk qerlvtvdei
     1681 geveelplne sadisfaaln tkgeegntgr dsigfissqm pedpstlvtv deiqddssdl
     1741 hlvtldevte ededsladfn nlkeelnfvt vdevgeeedg dndlkieltq rkndhpadkr
     1801 gdrkkrtvdk kktklealsq vgpinenime enpktmierr ssatvptkrv rigkmppsek
     1861 avtmepakde eafqisevge esgledsepe qkrkkiedss grsvapdvpe dldflvpkag
     1921 ffcpicslfy sdekamtnhc kstrhkqnte kfmakqrkek eqneaeerss r
//
LOCUS       XP_061011657            1958 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 638 isoform X2 [Dama dama].
ACCESSION   XP_061011657
VERSION     XP_061011657.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155674.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1958
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1958
                     /product="zinc finger protein 638 isoform X2"
                     /calculated_mol_wt=217395
     Region          661..735
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          747..>890
                     /region_name="PRK13914"
                     /note="invasion associated endopeptidase"
                     /db_xref="CDD:237555"
     Region          888..962
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          992..1065
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          1907..1939
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     CDS             1..1958
                     /gene="ZNF638"
                     /coded_by="XM_061155674.1:312..6188"
                     /db_xref="GeneID:133065044"
ORIGIN      
        1 msrprfnprg nfplqrprap npsemrppgp fmrpgsmglp rfypagrarg iphrfaches
       61 yqnmepqrmn vqvtqhqtdp rltkekldfh eaqqkkekph gsrwddephi sasvgvkqss
      121 vtqvteqspk vqsrytkesa ssilasfgls nedleelsry pdeqltpenm plilrdirmr
      181 kmgrrlpnlp srsrnketlg neavssnvid yghaskygyt edplevriyd peiptdeved
      241 efrsqpsisa svpapnvmcn smfpvedvfr qmdfpsessn nqsffpvesg skmsglhisr
      301 gqsvlepvks vsqsisqtvn qtmsqslipp pmnqqpfsse listvsqqer iprdpvinss
      361 nvhgsggskk nyqseadipi qspfgivkas wlpkfshada qkmkrlptps mmndyyaasp
      421 rifphlcslc nvecshlkdw iqhqntsthi escrqlrqqn egnrkenetp rgrshspspr
      481 hsrrsssshr frrsrspvrc myrprsrspr ichrfipryr srsrspyrmr npfrgspkcf
      541 rsvspertsr rserssdrkk aledviqrsg hesefskqkh leavdkgpsp aqklktgsga
      601 kmsvkstssa ksdsnigghc trhksksleg dttpeskqma dktvslqrkl rkdqsshygp
      661 vllisdlped gcteeeirki fqpfgkvndi livpyrkeay lemefkeait avmeyiettp
      721 llikgksvkv cvpgkkksqn kevkkkmsds kktsasilkk dtdastavet vtaasatksg
      781 qtktsatkvn kssgksagsv ksvvtvaakg nkasiktaks sgkksleikk aglvknkdts
      841 ksvnvpesse mktnvevktt engaketisa aveatenepv sketeemclv lisdlpskgy
      901 sveevsnlvk pfgglkdili lsshkkafie inrksadsmv kfytcfpism dgnqlsisma
      961 penmnlkdee aifttliren dpevnvdkiy drfvhlgnlp edglqcvlcv glqfgkvdhh
     1021 vymsnknkai lqldspesaq smysflkqnp qnigdhvlsc tlspkmdsse vkaekdpelg
     1081 kespdlknsp vdesevqtaa dspsikpsev eeesvpnvqt gtfiqqkepf eeepektlcv
     1141 sdfaletfev etqgeevkve iplgastsas idlftenvgd svlnqqvyts dfekeeteii
     1201 npetelstcd ntfieeknik giledspsea dffsgitqsv ieavaevdkq etvseivpst
     1261 cavalvpgis tgdeqavstk gisektnmde keenelntke armdlkigre kaekndrmvt
     1321 ekldkvlaav kekpaensvt kacpnktvvq ankpdetgki svlvassass sksgikadvv
     1381 sstkakatas ksenqksflk svlrdqinae krlsakesgl lkatsarsgl aenssklkpi
     1441 qsgvtrgssg risalqgkds kldyrdvtkq pqeteakpsv mkrddsnnkt ltgqntknpk
     1501 nttgrssksk eeplfpfnld efvtvdevie evnpfqvkqn plkgkrkeal kntpsselnl
     1561 kkkkgkisap rvvegelsfv tldeigeeed aaaqlaqalv tvdevidedd invedmvkns
     1621 nslltldeli dqddcishse tkdvtvlsva eeqdllkqer lvtvdeigev eelplnesad
     1681 isfaalntkg eegntgrdsi gfissqmped pstlvtvdei qddssdlhlv tldevteede
     1741 dsladfnnlk eelnfvtvde vgeeedgdnd lkieltqrkn dhpadkrgdr kkrtvdkkkt
     1801 klealsqvgp inenimeenp ktmierrssa tvptkrvrig kmppsekavt mepakdeeaf
     1861 qisevgeesg ledsepeqkr kkiedssgrs vapdvpedld flvpkagffc picslfysde
     1921 kamtnhckst rhkqntekfm akqrkekeqn eaeerssr
//
LOCUS       XP_061011658            2149 aa            linear   MAM 02-DEC-2023
DEFINITION  dysferlin isoform X1 [Dama dama].
ACCESSION   XP_061011658
VERSION     XP_061011658.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155675.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2149
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2149
                     /product="dysferlin isoform X1"
                     /calculated_mol_wt=243990
     Region          7..136
                     /region_name="C2A_Ferlin"
                     /note="C2 domain first repeat in Ferlin; cd08373"
                     /db_xref="CDD:176019"
     Region          251..360
                     /region_name="C2B_Ferlin"
                     /note="C2 domain second repeat in Ferlin; cd04011"
                     /db_xref="CDD:175978"
     Region          358..408
                     /region_name="FerI"
                     /note="FerI (NUC094) domain; pfam08151"
                     /db_xref="CDD:462377"
     Region          414..588
                     /region_name="C2C_Ferlin"
                     /note="C2 domain third repeat in Ferlin; cd04018"
                     /db_xref="CDD:175985"
     Site            order(445,451,499,501,513,515)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175985"
     Region          729..793
                     /region_name="FerA"
                     /note="FerA (NUC095) domain; pfam08165"
                     /db_xref="CDD:462389"
     Region          820..893
                     /region_name="FerB"
                     /note="FerB (NUC096) domain; pfam08150"
                     /db_xref="CDD:462376"
     Region          909..967
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          980..1036
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          1186..1314
                     /region_name="C2D_Ferlin"
                     /note="C2 domain fourth repeat in Ferlin; cd04017"
                     /db_xref="CDD:175984"
     Site            order(1202,1208,1264,1266)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175984"
     Region          1648..1771
                     /region_name="C2E_Ferlin"
                     /note="C2 domain fifth repeat in Ferlin; cd04037"
                     /db_xref="CDD:176002"
     Site            order(1663,1669,1718,1720,1725)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176002"
     Region          1882..2013
                     /region_name="C2F_Ferlin"
                     /note="C2 domain sixth repeat in Ferlin; cd08374"
                     /db_xref="CDD:176020"
     Region          2026..>2113
                     /region_name="Ferlin_C"
                     /note="Ferlin C-terminus; pfam16165"
                     /db_xref="CDD:435183"
     CDS             1..2149
                     /gene="DYSF"
                     /coded_by="XM_061155675.1:145..6594"
                     /db_xref="GeneID:133065045"
ORIGIN      
        1 mlscqlvras nlpslkkdrr sdpvasltfr gvkkrtkvik nnvnpvwneg fewdlkgipl
       61 dqgsellvvv kdhetmgrnr flgeaniplr evlatpslsa sfnaplldtk kqptgaslvl
      121 qvsytplpga mptfppltpl epsptlpdmd mvagrgqsra etwsllsdst vdtrcsgkkw
      181 laptdtggee dtedqgltgd eaepfldqsg algpgdpstl kkppshpppy hpggrrkkst
      241 paprkllsdk pqdfqirvqv iegrqlpgvn ikpvvkitaa gqtkrtrihk gnspffnetl
      301 ffnvfdspae lfnepifitv vdsrslrtda ligefrmdvg siyreprhay lrkwlllsdp
      361 ddfsagargy lkaslcvlgp gdeaplerkd psedkedies nllrpigval rgahfclkvf
      421 raedlpqmdd avmdnvrqif gfdsnkknlv dpfvevsfag kmlcsrilek tanpqwnqsv
      481 tlpamfpsmc ekmrirvidw drlthndiva ttylsmskis asggeieeep agvvkpppat
      541 dlddhlgflp tfgpcyinly gspreftgfp dpyaelntgk gegvayrgrl llsletklve
      601 hseqkveals addilrveky lrrrkyslfa afysatmlqd vddaiqfevs ignygnkfdt
      661 tclplasttq ysravfdgch yyylpwgnvk pvvvlssywe dishrveaqn qllriadqle
      721 agleqvhlal kaqcsdedad slvvqlvdel iagcsqplgd vqempsathl dqylyqlrtr
      781 hlsqiteaaq alklghselp aaleqaedwl lrlraladep qnslpdiviw mlqgdkrvay
      841 qrvpahevlf srrgasycgk ncgklqtifl kypmegvpga rmpvqirvrl wfglsvdeke
      901 fnqfaegkls vfaetyenqt klalvgnwgt tgltypkfsd itgriklpkd sfrpsagwaw
      961 agdwfvcpek tllhdtdagh lsfveevfen qtrlpggqwi ymsdnytdvn gekvlpkddi
     1021 ecplgwkwed eewstdlnra vdeqgweysi tippdrkprh wvpaekmyyt hrrrrwvrlr
     1081 rrdlsqmeal krhrqaeaeg egweyaslfg wkfhleyrkt dafrrrrwrr rmeplektgp
     1141 aavfalegal ggvvddrsed svsvstlsfg vnrptiscif dygnryhlrc ymyqardlpa
     1201 mdkdsfsdpy avvsflhqsq ktvvakntln ptwdqtlify eieifgepss iaeqppsivv
     1261 elydhdtygv defmgrcicq pslermprla wfpltrgsqp agellasfel iqrekpaihh
     1321 ipgfevqdtt gileelcapa fflqgllpts edtdlpyppp qretniymvp qnikpvlqrt
     1381 aieilawglr nmksyqlasv sspslvvecg gqsvqscvik nlrknpnfdi ctlfmevmlp
     1441 reelycppiv vkvidnrqfg rrpvvgqcti rslesflcdp ysedspspqg gpddvsllsp
     1501 gedvlididd keplipiqfa dglsglaptn masspsslhe eefidwwskf fasigesekc
     1561 gsylekdfdt lkvydtplen vkafeglsdf cntfklyrgk tqeetedpsv igefkglfki
     1621 yplpedpaip lpprqfhqla sqgpqeclvr vyiirafglq pkdpngkcdp yikisigkks
     1681 vsdqdnyipc tlepvfgkmf eltctlplek dlkvtlydyd llskdekige tvidlenrll
     1741 skfgarcglp qtycisgpnq wrdqlrpsql lhlfcqqrrv kapvyrtdrv vfqdkeytie
     1801 eieagrvpnp hlgpveerla lhvlqqqgli pehvesrply splqpdieqg klqmwvdlfp
     1861 kalgrpgppf nitprrarrf flrciiwntk dvilddlsit gekmsdiyvk gwmvgfeehk
     1921 qktdvhyrsl ggegnfnwrf vfpfdylpae qvctvskkda fwrldktesk iparvvfqiw
     1981 dndkfsfddf lgslqldlnr mpkpaktaek csvdqledtl hperfvslfe qktvkgwwpc
     2041 vadegekkil agklemtlei vteseheerp aghgrdepnm npkledprrp dtsflwftsp
     2101 yktmkfilwr rfrcaiilff ilfifllflg ifvysfpnya amklvkpfs
//
LOCUS       XP_061011659            2148 aa            linear   MAM 02-DEC-2023
DEFINITION  dysferlin isoform X2 [Dama dama].
ACCESSION   XP_061011659
VERSION     XP_061011659.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155676.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2148
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2148
                     /product="dysferlin isoform X2"
                     /calculated_mol_wt=243862
     Region          20..135
                     /region_name="C2A_Ferlin"
                     /note="C2 domain first repeat in Ferlin; cd08373"
                     /db_xref="CDD:176019"
     Region          250..359
                     /region_name="C2B_Ferlin"
                     /note="C2 domain second repeat in Ferlin; cd04011"
                     /db_xref="CDD:175978"
     Region          357..407
                     /region_name="FerI"
                     /note="FerI (NUC094) domain; pfam08151"
                     /db_xref="CDD:462377"
     Region          413..587
                     /region_name="C2C_Ferlin"
                     /note="C2 domain third repeat in Ferlin; cd04018"
                     /db_xref="CDD:175985"
     Site            order(444,450,498,500,512,514)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175985"
     Region          728..792
                     /region_name="FerA"
                     /note="FerA (NUC095) domain; pfam08165"
                     /db_xref="CDD:462389"
     Region          819..892
                     /region_name="FerB"
                     /note="FerB (NUC096) domain; pfam08150"
                     /db_xref="CDD:462376"
     Region          908..966
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          979..1035
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          1185..1313
                     /region_name="C2D_Ferlin"
                     /note="C2 domain fourth repeat in Ferlin; cd04017"
                     /db_xref="CDD:175984"
     Site            order(1201,1207,1263,1265)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175984"
     Region          1647..1770
                     /region_name="C2E_Ferlin"
                     /note="C2 domain fifth repeat in Ferlin; cd04037"
                     /db_xref="CDD:176002"
     Site            order(1662,1668,1717,1719,1724)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176002"
     Region          1881..2012
                     /region_name="C2F_Ferlin"
                     /note="C2 domain sixth repeat in Ferlin; cd08374"
                     /db_xref="CDD:176020"
     Region          2025..>2112
                     /region_name="Ferlin_C"
                     /note="Ferlin C-terminus; pfam16165"
                     /db_xref="CDD:435183"
     CDS             1..2148
                     /gene="DYSF"
                     /coded_by="XM_061155676.1:541..6987"
                     /db_xref="GeneID:133065045"
ORIGIN      
        1 mlrvfilyae nvhtpdtdis daycsavfag vkkrtkvikn nvnpvwnegf ewdlkgipld
       61 qgsellvvvk dhetmgrnrf lgeaniplre vlatpslsas fnaplldtkk qptgaslvlq
      121 vsytplpgam ptfppltple psptlpdmdm vagrgqsrae twsllsdstv dtrcsgkkwl
      181 aptdtggeed tedqgltgde aepfldqsga lgpgdpstlk kppshpppyh pggrrkkstp
      241 aprkllsdkp qdfqirvqvi egrqlpgvni kpvvkitaag qtkrtrihkg nspffnetlf
      301 fnvfdspael fnepifitvv dsrslrtdal igefrmdvgs iyreprhayl rkwlllsdpd
      361 dfsagargyl kaslcvlgpg deaplerkdp sedkediesn llrpigvalr gahfclkvfr
      421 aedlpqmdda vmdnvrqifg fdsnkknlvd pfvevsfagk mlcsrilekt anpqwnqsvt
      481 lpamfpsmce kmrirvidwd rlthndivat tylsmskisa sggeieeepa gvvkpppatd
      541 lddhlgflpt fgpcyinlyg spreftgfpd pyaelntgkg egvayrgrll lsletklveh
      601 seqkvealsa ddilrvekyl rrrkyslfaa fysatmlqdv ddaiqfevsi gnygnkfdtt
      661 clplasttqy sravfdgchy yylpwgnvkp vvvlssywed ishrveaqnq llriadqlea
      721 gleqvhlalk aqcsdedads lvvqlvdeli agcsqplgdv qempsathld qylyqlrtrh
      781 lsqiteaaqa lklghselpa aleqaedwll rlraladepq nslpdiviwm lqgdkrvayq
      841 rvpahevlfs rrgasycgkn cgklqtiflk ypmegvpgar mpvqirvrlw fglsvdekef
      901 nqfaegklsv faetyenqtk lalvgnwgtt gltypkfsdi tgriklpkds frpsagwawa
      961 gdwfvcpekt llhdtdaghl sfveevfenq trlpggqwiy msdnytdvng ekvlpkddie
     1021 cplgwkwede ewstdlnrav deqgweysit ippdrkprhw vpaekmyyth rrrrwvrlrr
     1081 rdlsqmealk rhrqaeaege gweyaslfgw kfhleyrktd afrrrrwrrr meplektgpa
     1141 avfalegalg gvvddrseds vsvstlsfgv nrptiscifd ygnryhlrcy myqardlpam
     1201 dkdsfsdpya vvsflhqsqk tvvakntlnp twdqtlifye ieifgepssi aeqppsivve
     1261 lydhdtygvd efmgrcicqp slermprlaw fpltrgsqpa gellasfeli qrekpaihhi
     1321 pgfevqdttg ileelcapaf flqgllptse dtdlpypppq retniymvpq nikpvlqrta
     1381 ieilawglrn mksyqlasvs spslvvecgg qsvqscvikn lrknpnfdic tlfmevmlpr
     1441 eelycppivv kvidnrqfgr rpvvgqctir slesflcdpy sedspspqgg pddvsllspg
     1501 edvlididdk eplipiqfad glsglaptnm asspsslhee efidwwskff asigesekcg
     1561 sylekdfdtl kvydtplenv kafeglsdfc ntfklyrgkt qeetedpsvi gefkglfkiy
     1621 plpedpaipl pprqfhqlas qgpqeclvrv yiirafglqp kdpngkcdpy ikisigkksv
     1681 sdqdnyipct lepvfgkmfe ltctlplekd lkvtlydydl lskdekiget vidlenrlls
     1741 kfgarcglpq tycisgpnqw rdqlrpsqll hlfcqqrrvk apvyrtdrvv fqdkeytiee
     1801 ieagrvpnph lgpveerlal hvlqqqglip ehvesrplys plqpdieqgk lqmwvdlfpk
     1861 algrpgppfn itprrarrff lrciiwntkd vilddlsitg ekmsdiyvkg wmvgfeehkq
     1921 ktdvhyrslg gegnfnwrfv fpfdylpaeq vctvskkdaf wrldkteski parvvfqiwd
     1981 ndkfsfddfl gslqldlnrm pkpaktaekc svdqledtlh perfvslfeq ktvkgwwpcv
     2041 adegekkila gklemtleiv teseheerpa ghgrdepnmn pkledprrpd tsflwftspy
     2101 ktmkfilwrr frcaiilffi lfifllflgi fvysfpnyaa mklvkpfs
//
LOCUS       XP_061011660            2135 aa            linear   MAM 02-DEC-2023
DEFINITION  dysferlin isoform X3 [Dama dama].
ACCESSION   XP_061011660
VERSION     XP_061011660.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155677.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2135
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2135
                     /product="dysferlin isoform X3"
                     /calculated_mol_wt=242517
     Region          7..136
                     /region_name="C2A_Ferlin"
                     /note="C2 domain first repeat in Ferlin; cd08373"
                     /db_xref="CDD:176019"
     Region          251..360
                     /region_name="C2B_Ferlin"
                     /note="C2 domain second repeat in Ferlin; cd04011"
                     /db_xref="CDD:175978"
     Region          358..408
                     /region_name="FerI"
                     /note="FerI (NUC094) domain; pfam08151"
                     /db_xref="CDD:462377"
     Region          414..588
                     /region_name="C2C_Ferlin"
                     /note="C2 domain third repeat in Ferlin; cd04018"
                     /db_xref="CDD:175985"
     Site            order(445,451,499,501,513,515)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175985"
     Region          729..793
                     /region_name="FerA"
                     /note="FerA (NUC095) domain; pfam08165"
                     /db_xref="CDD:462389"
     Region          820..893
                     /region_name="FerB"
                     /note="FerB (NUC096) domain; pfam08150"
                     /db_xref="CDD:462376"
     Region          909..967
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          980..1036
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          1186..1314
                     /region_name="C2D_Ferlin"
                     /note="C2 domain fourth repeat in Ferlin; cd04017"
                     /db_xref="CDD:175984"
     Site            order(1202,1208,1264,1266)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175984"
     Region          1634..1757
                     /region_name="C2E_Ferlin"
                     /note="C2 domain fifth repeat in Ferlin; cd04037"
                     /db_xref="CDD:176002"
     Site            order(1649,1655,1704,1706,1711)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176002"
     Region          1868..1999
                     /region_name="C2F_Ferlin"
                     /note="C2 domain sixth repeat in Ferlin; cd08374"
                     /db_xref="CDD:176020"
     Region          2012..>2099
                     /region_name="Ferlin_C"
                     /note="Ferlin C-terminus; pfam16165"
                     /db_xref="CDD:435183"
     CDS             1..2135
                     /gene="DYSF"
                     /coded_by="XM_061155677.1:144..6551"
                     /db_xref="GeneID:133065045"
ORIGIN      
        1 mlscqlvras nlpslkkdrr sdpvasltfr gvkkrtkvik nnvnpvwneg fewdlkgipl
       61 dqgsellvvv kdhetmgrnr flgeaniplr evlatpslsa sfnaplldtk kqptgaslvl
      121 qvsytplpga mptfppltpl epsptlpdmd mvagrgqsra etwsllsdst vdtrcsgkkw
      181 laptdtggee dtedqgltgd eaepfldqsg algpgdpstl kkppshpppy hpggrrkkst
      241 paprkllsdk pqdfqirvqv iegrqlpgvn ikpvvkitaa gqtkrtrihk gnspffnetl
      301 ffnvfdspae lfnepifitv vdsrslrtda ligefrmdvg siyreprhay lrkwlllsdp
      361 ddfsagargy lkaslcvlgp gdeaplerkd psedkedies nllrpigval rgahfclkvf
      421 raedlpqmdd avmdnvrqif gfdsnkknlv dpfvevsfag kmlcsrilek tanpqwnqsv
      481 tlpamfpsmc ekmrirvidw drlthndiva ttylsmskis asggeieeep agvvkpppat
      541 dlddhlgflp tfgpcyinly gspreftgfp dpyaelntgk gegvayrgrl llsletklve
      601 hseqkveals addilrveky lrrrkyslfa afysatmlqd vddaiqfevs ignygnkfdt
      661 tclplasttq ysravfdgch yyylpwgnvk pvvvlssywe dishrveaqn qllriadqle
      721 agleqvhlal kaqcsdedad slvvqlvdel iagcsqplgd vqempsathl dqylyqlrtr
      781 hlsqiteaaq alklghselp aaleqaedwl lrlraladep qnslpdiviw mlqgdkrvay
      841 qrvpahevlf srrgasycgk ncgklqtifl kypmegvpga rmpvqirvrl wfglsvdeke
      901 fnqfaegkls vfaetyenqt klalvgnwgt tgltypkfsd itgriklpkd sfrpsagwaw
      961 agdwfvcpek tllhdtdagh lsfveevfen qtrlpggqwi ymsdnytdvn gekvlpkddi
     1021 ecplgwkwed eewstdlnra vdeqgweysi tippdrkprh wvpaekmyyt hrrrrwvrlr
     1081 rrdlsqmeal krhrqaeaeg egweyaslfg wkfhleyrkt dafrrrrwrr rmeplektgp
     1141 aavfalegal ggvvddrsed svsvstlsfg vnrptiscif dygnryhlrc ymyqardlpa
     1201 mdkdsfsdpy avvsflhqsq ktvvakntln ptwdqtlify eieifgepss iaeqppsivv
     1261 elydhdtygv defmgrcicq pslermprla wfpltrgsqp agellasfel iqrekpaihh
     1321 ipgfevqdtt gileesedtd lpypppqret niymvpqnik pvlqrtaiei lawglrnmks
     1381 yqlasvssps lvvecggqsv qscviknlrk npnfdictlf mevmlpreel ycppivvkvi
     1441 dnrqfgrrpv vgqctirsle sflcdpysed spspqggpdd vsllspgedv lididdkepl
     1501 ipiqfadgls glaptnmass psslheeefi dwwskffasi gesekcgsyl ekdfdtlkvy
     1561 dtplenvkaf eglsdfcntf klyrgktqee tedpsvigef kglfkiyplp edpaiplppr
     1621 qfhqlasqgp qeclvrvyii rafglqpkdp ngkcdpyiki sigkksvsdq dnyipctlep
     1681 vfgkmfeltc tlplekdlkv tlydydllsk dekigetvid lenrllskfg arcglpqtyc
     1741 isgpnqwrdq lrpsqllhlf cqqrrvkapv yrtdrvvfqd keytieeiea grvpnphlgp
     1801 veerlalhvl qqqglipehv esrplysplq pdieqgklqm wvdlfpkalg rpgppfnitp
     1861 rrarrfflrc iiwntkdvil ddlsitgekm sdiyvkgwmv gfeehkqktd vhyrslggeg
     1921 nfnwrfvfpf dylpaeqvct vskkdafwrl dkteskipar vvfqiwdndk fsfddflgsl
     1981 qldlnrmpkp aktaekcsvd qledtlhper fvslfeqktv kgwwpcvade gekkilagkl
     2041 emtleivtes eheerpaghg rdepnmnpkl edprrpdtsf lwftspyktm kfilwrrfrc
     2101 aiilffilfi fllflgifvy sfpnyaamkl vkpfs
//
LOCUS       XP_061011661            2135 aa            linear   MAM 02-DEC-2023
DEFINITION  dysferlin isoform X4 [Dama dama].
ACCESSION   XP_061011661
VERSION     XP_061011661.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155678.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2135
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2135
                     /product="dysferlin isoform X4"
                     /calculated_mol_wt=242587
     Region          7..136
                     /region_name="C2A_Ferlin"
                     /note="C2 domain first repeat in Ferlin; cd08373"
                     /db_xref="CDD:176019"
     Region          251..360
                     /region_name="C2B_Ferlin"
                     /note="C2 domain second repeat in Ferlin; cd04011"
                     /db_xref="CDD:175978"
     Region          358..408
                     /region_name="FerI"
                     /note="FerI (NUC094) domain; pfam08151"
                     /db_xref="CDD:462377"
     Region          414..574
                     /region_name="C2C_Ferlin"
                     /note="C2 domain third repeat in Ferlin; cd04018"
                     /db_xref="CDD:175985"
     Site            order(445,451,499,501,513,515)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175985"
     Region          715..779
                     /region_name="FerA"
                     /note="FerA (NUC095) domain; pfam08165"
                     /db_xref="CDD:462389"
     Region          806..879
                     /region_name="FerB"
                     /note="FerB (NUC096) domain; pfam08150"
                     /db_xref="CDD:462376"
     Region          895..953
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          966..1022
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          1172..1300
                     /region_name="C2D_Ferlin"
                     /note="C2 domain fourth repeat in Ferlin; cd04017"
                     /db_xref="CDD:175984"
     Site            order(1188,1194,1250,1252)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175984"
     Region          1634..1757
                     /region_name="C2E_Ferlin"
                     /note="C2 domain fifth repeat in Ferlin; cd04037"
                     /db_xref="CDD:176002"
     Site            order(1649,1655,1704,1706,1711)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176002"
     Region          1868..1999
                     /region_name="C2F_Ferlin"
                     /note="C2 domain sixth repeat in Ferlin; cd08374"
                     /db_xref="CDD:176020"
     Region          2012..>2099
                     /region_name="Ferlin_C"
                     /note="Ferlin C-terminus; pfam16165"
                     /db_xref="CDD:435183"
     CDS             1..2135
                     /gene="DYSF"
                     /coded_by="XM_061155678.1:145..6552"
                     /db_xref="GeneID:133065045"
ORIGIN      
        1 mlscqlvras nlpslkkdrr sdpvasltfr gvkkrtkvik nnvnpvwneg fewdlkgipl
       61 dqgsellvvv kdhetmgrnr flgeaniplr evlatpslsa sfnaplldtk kqptgaslvl
      121 qvsytplpga mptfppltpl epsptlpdmd mvagrgqsra etwsllsdst vdtrcsgkkw
      181 laptdtggee dtedqgltgd eaepfldqsg algpgdpstl kkppshpppy hpggrrkkst
      241 paprkllsdk pqdfqirvqv iegrqlpgvn ikpvvkitaa gqtkrtrihk gnspffnetl
      301 ffnvfdspae lfnepifitv vdsrslrtda ligefrmdvg siyreprhay lrkwlllsdp
      361 ddfsagargy lkaslcvlgp gdeaplerkd psedkedies nllrpigval rgahfclkvf
      421 raedlpqmdd avmdnvrqif gfdsnkknlv dpfvevsfag kmlcsrilek tanpqwnqsv
      481 tlpamfpsmc ekmrirvidw drlthndiva ttylsmskis asggeievdd hlgflptfgp
      541 cyinlygspr eftgfpdpya elntgkgegv ayrgrlllsl etklvehseq kvealsaddi
      601 lrvekylrrr kyslfaafys atmlqdvdda iqfevsigny gnkfdttclp lasttqysra
      661 vfdgchyyyl pwgnvkpvvv lssywedish rveaqnqllr iadqleagle qvhlalkaqc
      721 sdedadslvv qlvdeliagc sqplgdvqem psathldqyl yqlrtrhlsq iteaaqalkl
      781 ghselpaale qaedwllrlr aladepqnsl pdiviwmlqg dkrvayqrvp ahevlfsrrg
      841 asycgkncgk lqtiflkypm egvpgarmpv qirvrlwfgl svdekefnqf aegklsvfae
      901 tyenqtklal vgnwgttglt ypkfsditgr iklpkdsfrp sagwawagdw fvcpektllh
      961 dtdaghlsfv eevfenqtrl pggqwiymsd nytdvngekv lpkddiecpl gwkwedeews
     1021 tdlnravdeq gweysitipp drkprhwvpa ekmyythrrr rwvrlrrrdl sqmealkrhr
     1081 qaeaegegwe yaslfgwkfh leyrktdafr rrrwrrrmep lektgpaavf alegalggvv
     1141 ddrsedsvsv stlsfgvnrp tiscifdygn ryhlrcymyq ardlpamdkd sfsdpyavvs
     1201 flhqsqktvv akntlnptwd qtlifyeiei fgepssiaeq ppsivvelyd hdtygvdefm
     1261 grcicqpsle rmprlawfpl trgsqpagel lasfeliqre kpaihhipgf evqdttgile
     1321 elcapafflq gllptsedtd lpypppqret niymvpqnik pvlqrtaiei lawglrnmks
     1381 yqlasvssps lvvecggqsv qscviknlrk npnfdictlf mevmlpreel ycppivvkvi
     1441 dnrqfgrrpv vgqctirsle sflcdpysed spspqggpdd vsllspgedv lididdkepl
     1501 ipiqfadgls glaptnmass psslheeefi dwwskffasi gesekcgsyl ekdfdtlkvy
     1561 dtplenvkaf eglsdfcntf klyrgktqee tedpsvigef kglfkiyplp edpaiplppr
     1621 qfhqlasqgp qeclvrvyii rafglqpkdp ngkcdpyiki sigkksvsdq dnyipctlep
     1681 vfgkmfeltc tlplekdlkv tlydydllsk dekigetvid lenrllskfg arcglpqtyc
     1741 isgpnqwrdq lrpsqllhlf cqqrrvkapv yrtdrvvfqd keytieeiea grvpnphlgp
     1801 veerlalhvl qqqglipehv esrplysplq pdieqgklqm wvdlfpkalg rpgppfnitp
     1861 rrarrfflrc iiwntkdvil ddlsitgekm sdiyvkgwmv gfeehkqktd vhyrslggeg
     1921 nfnwrfvfpf dylpaeqvct vskkdafwrl dkteskipar vvfqiwdndk fsfddflgsl
     1981 qldlnrmpkp aktaekcsvd qledtlhper fvslfeqktv kgwwpcvade gekkilagkl
     2041 emtleivtes eheerpaghg rdepnmnpkl edprrpdtsf lwftspyktm kfilwrrfrc
     2101 aiilffilfi fllflgifvy sfpnyaamkl vkpfs
//
LOCUS       XP_061011662            2128 aa            linear   MAM 02-DEC-2023
DEFINITION  dysferlin isoform X5 [Dama dama].
ACCESSION   XP_061011662
VERSION     XP_061011662.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155679.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2128
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2128
                     /product="dysferlin isoform X5"
                     /calculated_mol_wt=241947
     Region          7..136
                     /region_name="C2A_Ferlin"
                     /note="C2 domain first repeat in Ferlin; cd08373"
                     /db_xref="CDD:176019"
     Region          251..360
                     /region_name="C2B_Ferlin"
                     /note="C2 domain second repeat in Ferlin; cd04011"
                     /db_xref="CDD:175978"
     Region          358..408
                     /region_name="FerI"
                     /note="FerI (NUC094) domain; pfam08151"
                     /db_xref="CDD:462377"
     Region          414..588
                     /region_name="C2C_Ferlin"
                     /note="C2 domain third repeat in Ferlin; cd04018"
                     /db_xref="CDD:175985"
     Site            order(445,451,499,501,513,515)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175985"
     Region          729..793
                     /region_name="FerA"
                     /note="FerA (NUC095) domain; pfam08165"
                     /db_xref="CDD:462389"
     Region          820..893
                     /region_name="FerB"
                     /note="FerB (NUC096) domain; pfam08150"
                     /db_xref="CDD:462376"
     Region          909..967
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          980..1036
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          1186..1314
                     /region_name="C2D_Ferlin"
                     /note="C2 domain fourth repeat in Ferlin; cd04017"
                     /db_xref="CDD:175984"
     Site            order(1202,1208,1264,1266)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175984"
     Region          1627..1750
                     /region_name="C2E_Ferlin"
                     /note="C2 domain fifth repeat in Ferlin; cd04037"
                     /db_xref="CDD:176002"
     Site            order(1642,1648,1697,1699,1704)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176002"
     Region          1861..1992
                     /region_name="C2F_Ferlin"
                     /note="C2 domain sixth repeat in Ferlin; cd08374"
                     /db_xref="CDD:176020"
     Region          2005..>2092
                     /region_name="Ferlin_C"
                     /note="Ferlin C-terminus; pfam16165"
                     /db_xref="CDD:435183"
     CDS             1..2128
                     /gene="DYSF"
                     /coded_by="XM_061155679.1:144..6530"
                     /db_xref="GeneID:133065045"
ORIGIN      
        1 mlscqlvras nlpslkkdrr sdpvasltfr gvkkrtkvik nnvnpvwneg fewdlkgipl
       61 dqgsellvvv kdhetmgrnr flgeaniplr evlatpslsa sfnaplldtk kqptgaslvl
      121 qvsytplpga mptfppltpl epsptlpdmd mvagrgqsra etwsllsdst vdtrcsgkkw
      181 laptdtggee dtedqgltgd eaepfldqsg algpgdpstl kkppshpppy hpggrrkkst
      241 paprkllsdk pqdfqirvqv iegrqlpgvn ikpvvkitaa gqtkrtrihk gnspffnetl
      301 ffnvfdspae lfnepifitv vdsrslrtda ligefrmdvg siyreprhay lrkwlllsdp
      361 ddfsagargy lkaslcvlgp gdeaplerkd psedkedies nllrpigval rgahfclkvf
      421 raedlpqmdd avmdnvrqif gfdsnkknlv dpfvevsfag kmlcsrilek tanpqwnqsv
      481 tlpamfpsmc ekmrirvidw drlthndiva ttylsmskis asggeieeep agvvkpppat
      541 dlddhlgflp tfgpcyinly gspreftgfp dpyaelntgk gegvayrgrl llsletklve
      601 hseqkveals addilrveky lrrrkyslfa afysatmlqd vddaiqfevs ignygnkfdt
      661 tclplasttq ysravfdgch yyylpwgnvk pvvvlssywe dishrveaqn qllriadqle
      721 agleqvhlal kaqcsdedad slvvqlvdel iagcsqplgd vqempsathl dqylyqlrtr
      781 hlsqiteaaq alklghselp aaleqaedwl lrlraladep qnslpdiviw mlqgdkrvay
      841 qrvpahevlf srrgasycgk ncgklqtifl kypmegvpga rmpvqirvrl wfglsvdeke
      901 fnqfaegkls vfaetyenqt klalvgnwgt tgltypkfsd itgriklpkd sfrpsagwaw
      961 agdwfvcpek tllhdtdagh lsfveevfen qtrlpggqwi ymsdnytdvn gekvlpkddi
     1021 ecplgwkwed eewstdlnra vdeqgweysi tippdrkprh wvpaekmyyt hrrrrwvrlr
     1081 rrdlsqmeal krhrqaeaeg egweyaslfg wkfhleyrkt dafrrrrwrr rmeplektgp
     1141 aavfalegal ggvvddrsed svsvstlsfg vnrptiscif dygnryhlrc ymyqardlpa
     1201 mdkdsfsdpy avvsflhqsq ktvvakntln ptwdqtlify eieifgepss iaeqppsivv
     1261 elydhdtygv defmgrcicq pslermprla wfpltrgsqp agellasfel iqrekpaihh
     1321 ipgfevqdtt gileelcapa fflqgllpts edtdlpyppp qretniymvp qnikpvlqrt
     1381 aieilawglr nmksyqlasv sspslvvecg gqsvqscvik nlrknpnfdi ctlfmevmlp
     1441 reelycppiv vkvidnrqfg rrpvvgqcti rslesflcdp ysedspspqg gpddvsllsp
     1501 gedvlididd keplipiqee efidwwskff asigesekcg sylekdfdtl kvydtplenv
     1561 kafeglsdfc ntfklyrgkt qeetedpsvi gefkglfkiy plpedpaipl pprqfhqlas
     1621 qgpqeclvrv yiirafglqp kdpngkcdpy ikisigkksv sdqdnyipct lepvfgkmfe
     1681 ltctlplekd lkvtlydydl lskdekiget vidlenrlls kfgarcglpq tycisgpnqw
     1741 rdqlrpsqll hlfcqqrrvk apvyrtdrvv fqdkeytiee ieagrvpnph lgpveerlal
     1801 hvlqqqglip ehvesrplys plqpdieqgk lqmwvdlfpk algrpgppfn itprrarrff
     1861 lrciiwntkd vilddlsitg ekmsdiyvkg wmvgfeehkq ktdvhyrslg gegnfnwrfv
     1921 fpfdylpaeq vctvskkdaf wrldkteski parvvfqiwd ndkfsfddfl gslqldlnrm
     1981 pkpaktaekc svdqledtlh perfvslfeq ktvkgwwpcv adegekkila gklemtleiv
     2041 teseheerpa ghgrdepnmn pkledprrpd tsflwftspy ktmkfilwrr frcaiilffi
     2101 lfifllflgi fvysfpnyaa mklvkpfs
//
LOCUS       XP_061011663            2123 aa            linear   MAM 02-DEC-2023
DEFINITION  dysferlin isoform X6 [Dama dama].
ACCESSION   XP_061011663
VERSION     XP_061011663.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155680.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2123
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2123
                     /product="dysferlin isoform X6"
                     /calculated_mol_wt=240945
     Region          225..334
                     /region_name="C2B_Ferlin"
                     /note="C2 domain second repeat in Ferlin; cd04011"
                     /db_xref="CDD:175978"
     Region          332..382
                     /region_name="FerI"
                     /note="FerI (NUC094) domain; pfam08151"
                     /db_xref="CDD:462377"
     Region          388..562
                     /region_name="C2C_Ferlin"
                     /note="C2 domain third repeat in Ferlin; cd04018"
                     /db_xref="CDD:175985"
     Site            order(419,425,473,475,487,489)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175985"
     Region          703..767
                     /region_name="FerA"
                     /note="FerA (NUC095) domain; pfam08165"
                     /db_xref="CDD:462389"
     Region          794..867
                     /region_name="FerB"
                     /note="FerB (NUC096) domain; pfam08150"
                     /db_xref="CDD:462376"
     Region          883..941
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          954..1010
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          1160..1288
                     /region_name="C2D_Ferlin"
                     /note="C2 domain fourth repeat in Ferlin; cd04017"
                     /db_xref="CDD:175984"
     Site            order(1176,1182,1238,1240)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175984"
     Region          1622..1745
                     /region_name="C2E_Ferlin"
                     /note="C2 domain fifth repeat in Ferlin; cd04037"
                     /db_xref="CDD:176002"
     Site            order(1637,1643,1692,1694,1699)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176002"
     Region          1856..1987
                     /region_name="C2F_Ferlin"
                     /note="C2 domain sixth repeat in Ferlin; cd08374"
                     /db_xref="CDD:176020"
     Region          2000..>2087
                     /region_name="Ferlin_C"
                     /note="Ferlin C-terminus; pfam16165"
                     /db_xref="CDD:435183"
     CDS             1..2123
                     /gene="DYSF"
                     /coded_by="XM_061155680.1:135..6506"
                     /db_xref="GeneID:133065045"
ORIGIN      
        1 mrdssgtsrg spwtrapsfl wwsktmrrwg gtgswgkpts psgksspppa clpasmphcw
       61 tprsspqgik irsegfrtsl tllsrdscla slvlqvsytp lpgamptfpp ltplepsptl
      121 pdmdmvagrg qsraetwsll sdstvdtrcs gkkwlaptdt ggeedtedqg ltgdeaepfl
      181 dqsgalgpgd pstlkkppsh pppyhpggrr kkstpaprkl lsdkpqdfqi rvqviegrql
      241 pgvnikpvvk itaagqtkrt rihkgnspff netlffnvfd spaelfnepi fitvvdsrsl
      301 rtdaligefr mdvgsiyrep rhaylrkwll lsdpddfsag argylkaslc vlgpgdeapl
      361 erkdpsedke diesnllrpi gvalrgahfc lkvfraedlp qmddavmdnv rqifgfdsnk
      421 knlvdpfvev sfagkmlcsr ilektanpqw nqsvtlpamf psmcekmrir vidwdrlthn
      481 divattylsm skisasggei eeepagvvkp ppatdlddhl gflptfgpcy inlygspref
      541 tgfpdpyael ntgkgegvay rgrlllslet klvehseqkv ealsaddilr vekylrrrky
      601 slfaafysat mlqdvddaiq fevsignygn kfdttclpla sttqysravf dgchyyylpw
      661 gnvkpvvvls sywedishrv eaqnqllria dqleagleqv hlalkaqcsd edadslvvql
      721 vdeliagcsq plgdvqemps athldqylyq lrtrhlsqit eaaqalklgh selpaaleqa
      781 edwllrlral adepqnslpd iviwmlqgdk rvayqrvpah evlfsrrgas ycgkncgklq
      841 tiflkypmeg vpgarmpvqi rvrlwfglsv dekefnqfae gklsvfaety enqtklalvg
      901 nwgttgltyp kfsditgrik lpkdsfrpsa gwawagdwfv cpektllhdt daghlsfvee
      961 vfenqtrlpg gqwiymsdny tdvngekvlp kddiecplgw kwedeewstd lnravdeqgw
     1021 eysitippdr kprhwvpaek myythrrrrw vrlrrrdlsq mealkrhrqa eaegegweya
     1081 slfgwkfhle yrktdafrrr rwrrrmeple ktgpaavfal egalggvvdd rsedsvsvst
     1141 lsfgvnrpti scifdygnry hlrcymyqar dlpamdkdsf sdpyavvsfl hqsqktvvak
     1201 ntlnptwdqt lifyeieifg epssiaeqpp sivvelydhd tygvdefmgr cicqpslerm
     1261 prlawfpltr gsqpagella sfeliqrekp aihhipgfev qdttgileel capafflqgl
     1321 lptsedtdlp ypppqretni ymvpqnikpv lqrtaieila wglrnmksyq lasvsspslv
     1381 vecggqsvqs cviknlrknp nfdictlfme vmlpreelyc ppivvkvidn rqfgrrpvvg
     1441 qctirslesf lcdpysedsp spqggpddvs llspgedvli diddkeplip iqfadglsgl
     1501 aptnmassps slheeefidw wskffasige sekcgsylek dfdtlkvydt plenvkafeg
     1561 lsdfcntfkl yrgktqeete dpsvigefkg lfkiyplped paiplpprqf hqlasqgpqe
     1621 clvrvyiira fglqpkdpng kcdpyikisi gkksvsdqdn yipctlepvf gkmfeltctl
     1681 plekdlkvtl ydydllskde kigetvidle nrllskfgar cglpqtycis gpnqwrdqlr
     1741 psqllhlfcq qrrvkapvyr tdrvvfqdke ytieeieagr vpnphlgpve erlalhvlqq
     1801 qglipehves rplysplqpd ieqgklqmwv dlfpkalgrp gppfnitprr arrfflrcii
     1861 wntkdvildd lsitgekmsd iyvkgwmvgf eehkqktdvh yrslggegnf nwrfvfpfdy
     1921 lpaeqvctvs kkdafwrldk teskiparvv fqiwdndkfs fddflgslql dlnrmpkpak
     1981 taekcsvdql edtlhperfv slfeqktvkg wwpcvadege kkilagklem tleivteseh
     2041 eerpaghgrd epnmnpkled prrpdtsflw ftspyktmkf ilwrrfrcai ilffilfifl
     2101 lflgifvysf pnyaamklvk pfs
//
LOCUS       XP_061011664            2123 aa            linear   MAM 02-DEC-2023
DEFINITION  dysferlin isoform X6 [Dama dama].
ACCESSION   XP_061011664
VERSION     XP_061011664.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155681.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2123
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2123
                     /product="dysferlin isoform X6"
                     /calculated_mol_wt=240945
     Region          225..334
                     /region_name="C2B_Ferlin"
                     /note="C2 domain second repeat in Ferlin; cd04011"
                     /db_xref="CDD:175978"
     Region          332..382
                     /region_name="FerI"
                     /note="FerI (NUC094) domain; pfam08151"
                     /db_xref="CDD:462377"
     Region          388..562
                     /region_name="C2C_Ferlin"
                     /note="C2 domain third repeat in Ferlin; cd04018"
                     /db_xref="CDD:175985"
     Site            order(419,425,473,475,487,489)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175985"
     Region          703..767
                     /region_name="FerA"
                     /note="FerA (NUC095) domain; pfam08165"
                     /db_xref="CDD:462389"
     Region          794..867
                     /region_name="FerB"
                     /note="FerB (NUC096) domain; pfam08150"
                     /db_xref="CDD:462376"
     Region          883..941
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          954..1010
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          1160..1288
                     /region_name="C2D_Ferlin"
                     /note="C2 domain fourth repeat in Ferlin; cd04017"
                     /db_xref="CDD:175984"
     Site            order(1176,1182,1238,1240)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175984"
     Region          1622..1745
                     /region_name="C2E_Ferlin"
                     /note="C2 domain fifth repeat in Ferlin; cd04037"
                     /db_xref="CDD:176002"
     Site            order(1637,1643,1692,1694,1699)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176002"
     Region          1856..1987
                     /region_name="C2F_Ferlin"
                     /note="C2 domain sixth repeat in Ferlin; cd08374"
                     /db_xref="CDD:176020"
     Region          2000..>2087
                     /region_name="Ferlin_C"
                     /note="Ferlin C-terminus; pfam16165"
                     /db_xref="CDD:435183"
     CDS             1..2123
                     /gene="DYSF"
                     /coded_by="XM_061155681.1:72..6443"
                     /db_xref="GeneID:133065045"
ORIGIN      
        1 mrdssgtsrg spwtrapsfl wwsktmrrwg gtgswgkpts psgksspppa clpasmphcw
       61 tprsspqgik irsegfrtsl tllsrdscla slvlqvsytp lpgamptfpp ltplepsptl
      121 pdmdmvagrg qsraetwsll sdstvdtrcs gkkwlaptdt ggeedtedqg ltgdeaepfl
      181 dqsgalgpgd pstlkkppsh pppyhpggrr kkstpaprkl lsdkpqdfqi rvqviegrql
      241 pgvnikpvvk itaagqtkrt rihkgnspff netlffnvfd spaelfnepi fitvvdsrsl
      301 rtdaligefr mdvgsiyrep rhaylrkwll lsdpddfsag argylkaslc vlgpgdeapl
      361 erkdpsedke diesnllrpi gvalrgahfc lkvfraedlp qmddavmdnv rqifgfdsnk
      421 knlvdpfvev sfagkmlcsr ilektanpqw nqsvtlpamf psmcekmrir vidwdrlthn
      481 divattylsm skisasggei eeepagvvkp ppatdlddhl gflptfgpcy inlygspref
      541 tgfpdpyael ntgkgegvay rgrlllslet klvehseqkv ealsaddilr vekylrrrky
      601 slfaafysat mlqdvddaiq fevsignygn kfdttclpla sttqysravf dgchyyylpw
      661 gnvkpvvvls sywedishrv eaqnqllria dqleagleqv hlalkaqcsd edadslvvql
      721 vdeliagcsq plgdvqemps athldqylyq lrtrhlsqit eaaqalklgh selpaaleqa
      781 edwllrlral adepqnslpd iviwmlqgdk rvayqrvpah evlfsrrgas ycgkncgklq
      841 tiflkypmeg vpgarmpvqi rvrlwfglsv dekefnqfae gklsvfaety enqtklalvg
      901 nwgttgltyp kfsditgrik lpkdsfrpsa gwawagdwfv cpektllhdt daghlsfvee
      961 vfenqtrlpg gqwiymsdny tdvngekvlp kddiecplgw kwedeewstd lnravdeqgw
     1021 eysitippdr kprhwvpaek myythrrrrw vrlrrrdlsq mealkrhrqa eaegegweya
     1081 slfgwkfhle yrktdafrrr rwrrrmeple ktgpaavfal egalggvvdd rsedsvsvst
     1141 lsfgvnrpti scifdygnry hlrcymyqar dlpamdkdsf sdpyavvsfl hqsqktvvak
     1201 ntlnptwdqt lifyeieifg epssiaeqpp sivvelydhd tygvdefmgr cicqpslerm
     1261 prlawfpltr gsqpagella sfeliqrekp aihhipgfev qdttgileel capafflqgl
     1321 lptsedtdlp ypppqretni ymvpqnikpv lqrtaieila wglrnmksyq lasvsspslv
     1381 vecggqsvqs cviknlrknp nfdictlfme vmlpreelyc ppivvkvidn rqfgrrpvvg
     1441 qctirslesf lcdpysedsp spqggpddvs llspgedvli diddkeplip iqfadglsgl
     1501 aptnmassps slheeefidw wskffasige sekcgsylek dfdtlkvydt plenvkafeg
     1561 lsdfcntfkl yrgktqeete dpsvigefkg lfkiyplped paiplpprqf hqlasqgpqe
     1621 clvrvyiira fglqpkdpng kcdpyikisi gkksvsdqdn yipctlepvf gkmfeltctl
     1681 plekdlkvtl ydydllskde kigetvidle nrllskfgar cglpqtycis gpnqwrdqlr
     1741 psqllhlfcq qrrvkapvyr tdrvvfqdke ytieeieagr vpnphlgpve erlalhvlqq
     1801 qglipehves rplysplqpd ieqgklqmwv dlfpkalgrp gppfnitprr arrfflrcii
     1861 wntkdvildd lsitgekmsd iyvkgwmvgf eehkqktdvh yrslggegnf nwrfvfpfdy
     1921 lpaeqvctvs kkdafwrldk teskiparvv fqiwdndkfs fddflgslql dlnrmpkpak
     1981 taekcsvdql edtlhperfv slfeqktvkg wwpcvadege kkilagklem tleivteseh
     2041 eerpaghgrd epnmnpkled prrpdtsflw ftspyktmkf ilwrrfrcai ilffilfifl
     2101 lflgifvysf pnyaamklvk pfs
//
LOCUS       XP_061011665            2121 aa            linear   MAM 02-DEC-2023
DEFINITION  dysferlin isoform X7 [Dama dama].
ACCESSION   XP_061011665
VERSION     XP_061011665.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155682.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2121
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2121
                     /product="dysferlin isoform X7"
                     /calculated_mol_wt=241114
     Region          7..136
                     /region_name="C2A_Ferlin"
                     /note="C2 domain first repeat in Ferlin; cd08373"
                     /db_xref="CDD:176019"
     Region          251..360
                     /region_name="C2B_Ferlin"
                     /note="C2 domain second repeat in Ferlin; cd04011"
                     /db_xref="CDD:175978"
     Region          358..408
                     /region_name="FerI"
                     /note="FerI (NUC094) domain; pfam08151"
                     /db_xref="CDD:462377"
     Region          414..574
                     /region_name="C2C_Ferlin"
                     /note="C2 domain third repeat in Ferlin; cd04018"
                     /db_xref="CDD:175985"
     Site            order(445,451,499,501,513,515)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175985"
     Region          715..779
                     /region_name="FerA"
                     /note="FerA (NUC095) domain; pfam08165"
                     /db_xref="CDD:462389"
     Region          806..879
                     /region_name="FerB"
                     /note="FerB (NUC096) domain; pfam08150"
                     /db_xref="CDD:462376"
     Region          895..953
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          966..1022
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          1172..1300
                     /region_name="C2D_Ferlin"
                     /note="C2 domain fourth repeat in Ferlin; cd04017"
                     /db_xref="CDD:175984"
     Site            order(1188,1194,1250,1252)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175984"
     Region          1620..1743
                     /region_name="C2E_Ferlin"
                     /note="C2 domain fifth repeat in Ferlin; cd04037"
                     /db_xref="CDD:176002"
     Site            order(1635,1641,1690,1692,1697)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176002"
     Region          1854..1985
                     /region_name="C2F_Ferlin"
                     /note="C2 domain sixth repeat in Ferlin; cd08374"
                     /db_xref="CDD:176020"
     Region          1998..>2085
                     /region_name="Ferlin_C"
                     /note="Ferlin C-terminus; pfam16165"
                     /db_xref="CDD:435183"
     CDS             1..2121
                     /gene="DYSF"
                     /coded_by="XM_061155682.1:144..6509"
                     /db_xref="GeneID:133065045"
ORIGIN      
        1 mlscqlvras nlpslkkdrr sdpvasltfr gvkkrtkvik nnvnpvwneg fewdlkgipl
       61 dqgsellvvv kdhetmgrnr flgeaniplr evlatpslsa sfnaplldtk kqptgaslvl
      121 qvsytplpga mptfppltpl epsptlpdmd mvagrgqsra etwsllsdst vdtrcsgkkw
      181 laptdtggee dtedqgltgd eaepfldqsg algpgdpstl kkppshpppy hpggrrkkst
      241 paprkllsdk pqdfqirvqv iegrqlpgvn ikpvvkitaa gqtkrtrihk gnspffnetl
      301 ffnvfdspae lfnepifitv vdsrslrtda ligefrmdvg siyreprhay lrkwlllsdp
      361 ddfsagargy lkaslcvlgp gdeaplerkd psedkedies nllrpigval rgahfclkvf
      421 raedlpqmdd avmdnvrqif gfdsnkknlv dpfvevsfag kmlcsrilek tanpqwnqsv
      481 tlpamfpsmc ekmrirvidw drlthndiva ttylsmskis asggeievdd hlgflptfgp
      541 cyinlygspr eftgfpdpya elntgkgegv ayrgrlllsl etklvehseq kvealsaddi
      601 lrvekylrrr kyslfaafys atmlqdvdda iqfevsigny gnkfdttclp lasttqysra
      661 vfdgchyyyl pwgnvkpvvv lssywedish rveaqnqllr iadqleagle qvhlalkaqc
      721 sdedadslvv qlvdeliagc sqplgdvqem psathldqyl yqlrtrhlsq iteaaqalkl
      781 ghselpaale qaedwllrlr aladepqnsl pdiviwmlqg dkrvayqrvp ahevlfsrrg
      841 asycgkncgk lqtiflkypm egvpgarmpv qirvrlwfgl svdekefnqf aegklsvfae
      901 tyenqtklal vgnwgttglt ypkfsditgr iklpkdsfrp sagwawagdw fvcpektllh
      961 dtdaghlsfv eevfenqtrl pggqwiymsd nytdvngekv lpkddiecpl gwkwedeews
     1021 tdlnravdeq gweysitipp drkprhwvpa ekmyythrrr rwvrlrrrdl sqmealkrhr
     1081 qaeaegegwe yaslfgwkfh leyrktdafr rrrwrrrmep lektgpaavf alegalggvv
     1141 ddrsedsvsv stlsfgvnrp tiscifdygn ryhlrcymyq ardlpamdkd sfsdpyavvs
     1201 flhqsqktvv akntlnptwd qtlifyeiei fgepssiaeq ppsivvelyd hdtygvdefm
     1261 grcicqpsle rmprlawfpl trgsqpagel lasfeliqre kpaihhipgf evqdttgile
     1321 esedtdlpyp ppqretniym vpqnikpvlq rtaieilawg lrnmksyqla svsspslvve
     1381 cggqsvqscv iknlrknpnf dictlfmevm lpreelycpp ivvkvidnrq fgrrpvvgqc
     1441 tirslesflc dpysedspsp qggpddvsll spgedvlidi ddkeplipiq fadglsglap
     1501 tnmasspssl heeefidwws kffasigese kcgsylekdf dtlkvydtpl envkafegls
     1561 dfcntfklyr gktqeetedp svigefkglf kiyplpedpa iplpprqfhq lasqgpqecl
     1621 vrvyiirafg lqpkdpngkc dpyikisigk ksvsdqdnyi pctlepvfgk mfeltctlpl
     1681 ekdlkvtlyd ydllskdeki getvidlenr llskfgarcg lpqtycisgp nqwrdqlrps
     1741 qllhlfcqqr rvkapvyrtd rvvfqdkeyt ieeieagrvp nphlgpveer lalhvlqqqg
     1801 lipehvesrp lysplqpdie qgklqmwvdl fpkalgrpgp pfnitprrar rfflrciiwn
     1861 tkdvilddls itgekmsdiy vkgwmvgfee hkqktdvhyr slggegnfnw rfvfpfdylp
     1921 aeqvctvskk dafwrldkte skiparvvfq iwdndkfsfd dflgslqldl nrmpkpakta
     1981 ekcsvdqled tlhperfvsl feqktvkgww pcvadegekk ilagklemtl eivtesehee
     2041 rpaghgrdep nmnpkledpr rpdtsflwft spyktmkfil wrrfrcaiil ffilfifllf
     2101 lgifvysfpn yaamklvkpf s
//
LOCUS       XP_061011666            2120 aa            linear   MAM 02-DEC-2023
DEFINITION  dysferlin isoform X8 [Dama dama].
ACCESSION   XP_061011666
VERSION     XP_061011666.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155683.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2120
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2120
                     /product="dysferlin isoform X8"
                     /calculated_mol_wt=240987
     Region          20..135
                     /region_name="C2A_Ferlin"
                     /note="C2 domain first repeat in Ferlin; cd08373"
                     /db_xref="CDD:176019"
     Region          250..359
                     /region_name="C2B_Ferlin"
                     /note="C2 domain second repeat in Ferlin; cd04011"
                     /db_xref="CDD:175978"
     Region          357..407
                     /region_name="FerI"
                     /note="FerI (NUC094) domain; pfam08151"
                     /db_xref="CDD:462377"
     Region          413..573
                     /region_name="C2C_Ferlin"
                     /note="C2 domain third repeat in Ferlin; cd04018"
                     /db_xref="CDD:175985"
     Site            order(444,450,498,500,512,514)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175985"
     Region          714..778
                     /region_name="FerA"
                     /note="FerA (NUC095) domain; pfam08165"
                     /db_xref="CDD:462389"
     Region          805..878
                     /region_name="FerB"
                     /note="FerB (NUC096) domain; pfam08150"
                     /db_xref="CDD:462376"
     Region          894..952
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          965..1021
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          1171..1299
                     /region_name="C2D_Ferlin"
                     /note="C2 domain fourth repeat in Ferlin; cd04017"
                     /db_xref="CDD:175984"
     Site            order(1187,1193,1249,1251)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175984"
     Region          1619..1742
                     /region_name="C2E_Ferlin"
                     /note="C2 domain fifth repeat in Ferlin; cd04037"
                     /db_xref="CDD:176002"
     Site            order(1634,1640,1689,1691,1696)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176002"
     Region          1853..1984
                     /region_name="C2F_Ferlin"
                     /note="C2 domain sixth repeat in Ferlin; cd08374"
                     /db_xref="CDD:176020"
     Region          1997..>2084
                     /region_name="Ferlin_C"
                     /note="Ferlin C-terminus; pfam16165"
                     /db_xref="CDD:435183"
     CDS             1..2120
                     /gene="DYSF"
                     /coded_by="XM_061155683.1:539..6901"
                     /db_xref="GeneID:133065045"
ORIGIN      
        1 mlrvfilyae nvhtpdtdis daycsavfag vkkrtkvikn nvnpvwnegf ewdlkgipld
       61 qgsellvvvk dhetmgrnrf lgeaniplre vlatpslsas fnaplldtkk qptgaslvlq
      121 vsytplpgam ptfppltple psptlpdmdm vagrgqsrae twsllsdstv dtrcsgkkwl
      181 aptdtggeed tedqgltgde aepfldqsga lgpgdpstlk kppshpppyh pggrrkkstp
      241 aprkllsdkp qdfqirvqvi egrqlpgvni kpvvkitaag qtkrtrihkg nspffnetlf
      301 fnvfdspael fnepifitvv dsrslrtdal igefrmdvgs iyreprhayl rkwlllsdpd
      361 dfsagargyl kaslcvlgpg deaplerkdp sedkediesn llrpigvalr gahfclkvfr
      421 aedlpqmdda vmdnvrqifg fdsnkknlvd pfvevsfagk mlcsrilekt anpqwnqsvt
      481 lpamfpsmce kmrirvidwd rlthndivat tylsmskisa sggeievddh lgflptfgpc
      541 yinlygspre ftgfpdpyae lntgkgegva yrgrlllsle tklvehseqk vealsaddil
      601 rvekylrrrk yslfaafysa tmlqdvddai qfevsignyg nkfdttclpl asttqysrav
      661 fdgchyyylp wgnvkpvvvl ssywedishr veaqnqllri adqleagleq vhlalkaqcs
      721 dedadslvvq lvdeliagcs qplgdvqemp sathldqyly qlrtrhlsqi teaaqalklg
      781 hselpaaleq aedwllrlra ladepqnslp diviwmlqgd krvayqrvpa hevlfsrrga
      841 sycgkncgkl qtiflkypme gvpgarmpvq irvrlwfgls vdekefnqfa egklsvfaet
      901 yenqtklalv gnwgttglty pkfsditgri klpkdsfrps agwawagdwf vcpektllhd
      961 tdaghlsfve evfenqtrlp ggqwiymsdn ytdvngekvl pkddiecplg wkwedeewst
     1021 dlnravdeqg weysitippd rkprhwvpae kmyythrrrr wvrlrrrdls qmealkrhrq
     1081 aeaegegwey aslfgwkfhl eyrktdafrr rrwrrrmepl ektgpaavfa legalggvvd
     1141 drsedsvsvs tlsfgvnrpt iscifdygnr yhlrcymyqa rdlpamdkds fsdpyavvsf
     1201 lhqsqktvva kntlnptwdq tlifyeieif gepssiaeqp psivvelydh dtygvdefmg
     1261 rcicqpsler mprlawfplt rgsqpagell asfeliqrek paihhipgfe vqdttgilee
     1321 sedtdlpypp pqretniymv pqnikpvlqr taieilawgl rnmksyqlas vsspslvvec
     1381 ggqsvqscvi knlrknpnfd ictlfmevml preelycppi vvkvidnrqf grrpvvgqct
     1441 irslesflcd pysedspspq ggpddvslls pgedvlidid dkeplipiqf adglsglapt
     1501 nmasspsslh eeefidwwsk ffasigesek cgsylekdfd tlkvydtple nvkafeglsd
     1561 fcntfklyrg ktqeetedps vigefkglfk iyplpedpai plpprqfhql asqgpqeclv
     1621 rvyiirafgl qpkdpngkcd pyikisigkk svsdqdnyip ctlepvfgkm feltctlple
     1681 kdlkvtlydy dllskdekig etvidlenrl lskfgarcgl pqtycisgpn qwrdqlrpsq
     1741 llhlfcqqrr vkapvyrtdr vvfqdkeyti eeieagrvpn phlgpveerl alhvlqqqgl
     1801 ipehvesrpl ysplqpdieq gklqmwvdlf pkalgrpgpp fnitprrarr fflrciiwnt
     1861 kdvilddlsi tgekmsdiyv kgwmvgfeeh kqktdvhyrs lggegnfnwr fvfpfdylpa
     1921 eqvctvskkd afwrldktes kiparvvfqi wdndkfsfdd flgslqldln rmpkpaktae
     1981 kcsvdqledt lhperfvslf eqktvkgwwp cvadegekki lagklemtle ivteseheer
     2041 paghgrdepn mnpkledprr pdtsflwfts pyktmkfilw rrfrcaiilf filfifllfl
     2101 gifvysfpny aamklvkpfs
//
LOCUS       XP_061011667            2118 aa            linear   MAM 02-DEC-2023
DEFINITION  dysferlin isoform X9 [Dama dama].
ACCESSION   XP_061011667
VERSION     XP_061011667.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155684.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2118
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2118
                     /product="dysferlin isoform X9"
                     /calculated_mol_wt=240613
     Region          7..136
                     /region_name="C2A_Ferlin"
                     /note="C2 domain first repeat in Ferlin; cd08373"
                     /db_xref="CDD:176019"
     Region          220..329
                     /region_name="C2B_Ferlin"
                     /note="C2 domain second repeat in Ferlin; cd04011"
                     /db_xref="CDD:175978"
     Region          327..377
                     /region_name="FerI"
                     /note="FerI (NUC094) domain; pfam08151"
                     /db_xref="CDD:462377"
     Region          383..557
                     /region_name="C2C_Ferlin"
                     /note="C2 domain third repeat in Ferlin; cd04018"
                     /db_xref="CDD:175985"
     Site            order(414,420,468,470,482,484)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175985"
     Region          698..762
                     /region_name="FerA"
                     /note="FerA (NUC095) domain; pfam08165"
                     /db_xref="CDD:462389"
     Region          789..862
                     /region_name="FerB"
                     /note="FerB (NUC096) domain; pfam08150"
                     /db_xref="CDD:462376"
     Region          878..936
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          949..1005
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          1155..1283
                     /region_name="C2D_Ferlin"
                     /note="C2 domain fourth repeat in Ferlin; cd04017"
                     /db_xref="CDD:175984"
     Site            order(1171,1177,1233,1235)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175984"
     Region          1617..1740
                     /region_name="C2E_Ferlin"
                     /note="C2 domain fifth repeat in Ferlin; cd04037"
                     /db_xref="CDD:176002"
     Site            order(1632,1638,1687,1689,1694)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176002"
     Region          1851..1982
                     /region_name="C2F_Ferlin"
                     /note="C2 domain sixth repeat in Ferlin; cd08374"
                     /db_xref="CDD:176020"
     Region          1995..>2082
                     /region_name="Ferlin_C"
                     /note="Ferlin C-terminus; pfam16165"
                     /db_xref="CDD:435183"
     CDS             1..2118
                     /gene="DYSF"
                     /coded_by="XM_061155684.1:145..6501"
                     /db_xref="GeneID:133065045"
ORIGIN      
        1 mlscqlvras nlpslkkdrr sdpvasltfr gvkkrtkvik nnvnpvwneg fewdlkgipl
       61 dqgsellvvv kdhetmgrnr flgeaniplr evlatpslsa sfnaplldtk kqptgaslvl
      121 qvsytplpga mptfppltpl epsptlpdmd mvadtggeed tedqgltgde aepfldqsga
      181 lgpgdpstlk kppshpppyh pggrrkkstp aprkllsdkp qdfqirvqvi egrqlpgvni
      241 kpvvkitaag qtkrtrihkg nspffnetlf fnvfdspael fnepifitvv dsrslrtdal
      301 igefrmdvgs iyreprhayl rkwlllsdpd dfsagargyl kaslcvlgpg deaplerkdp
      361 sedkediesn llrpigvalr gahfclkvfr aedlpqmdda vmdnvrqifg fdsnkknlvd
      421 pfvevsfagk mlcsrilekt anpqwnqsvt lpamfpsmce kmrirvidwd rlthndivat
      481 tylsmskisa sggeieeepa gvvkpppatd lddhlgflpt fgpcyinlyg spreftgfpd
      541 pyaelntgkg egvayrgrll lsletklveh seqkvealsa ddilrvekyl rrrkyslfaa
      601 fysatmlqdv ddaiqfevsi gnygnkfdtt clplasttqy sravfdgchy yylpwgnvkp
      661 vvvlssywed ishrveaqnq llriadqlea gleqvhlalk aqcsdedads lvvqlvdeli
      721 agcsqplgdv qempsathld qylyqlrtrh lsqiteaaqa lklghselpa aleqaedwll
      781 rlraladepq nslpdiviwm lqgdkrvayq rvpahevlfs rrgasycgkn cgklqtiflk
      841 ypmegvpgar mpvqirvrlw fglsvdekef nqfaegklsv faetyenqtk lalvgnwgtt
      901 gltypkfsdi tgriklpkds frpsagwawa gdwfvcpekt llhdtdaghl sfveevfenq
      961 trlpggqwiy msdnytdvng ekvlpkddie cplgwkwede ewstdlnrav deqgweysit
     1021 ippdrkprhw vpaekmyyth rrrrwvrlrr rdlsqmealk rhrqaeaege gweyaslfgw
     1081 kfhleyrktd afrrrrwrrr meplektgpa avfalegalg gvvddrseds vsvstlsfgv
     1141 nrptiscifd ygnryhlrcy myqardlpam dkdsfsdpya vvsflhqsqk tvvakntlnp
     1201 twdqtlifye ieifgepssi aeqppsivve lydhdtygvd efmgrcicqp slermprlaw
     1261 fpltrgsqpa gellasfeli qrekpaihhi pgfevqdttg ileelcapaf flqgllptse
     1321 dtdlpypppq retniymvpq nikpvlqrta ieilawglrn mksyqlasvs spslvvecgg
     1381 qsvqscvikn lrknpnfdic tlfmevmlpr eelycppivv kvidnrqfgr rpvvgqctir
     1441 slesflcdpy sedspspqgg pddvsllspg edvlididdk eplipiqfad glsglaptnm
     1501 asspsslhee efidwwskff asigesekcg sylekdfdtl kvydtplenv kafeglsdfc
     1561 ntfklyrgkt qeetedpsvi gefkglfkiy plpedpaipl pprqfhqlas qgpqeclvrv
     1621 yiirafglqp kdpngkcdpy ikisigkksv sdqdnyipct lepvfgkmfe ltctlplekd
     1681 lkvtlydydl lskdekiget vidlenrlls kfgarcglpq tycisgpnqw rdqlrpsqll
     1741 hlfcqqrrvk apvyrtdrvv fqdkeytiee ieagrvpnph lgpveerlal hvlqqqglip
     1801 ehvesrplys plqpdieqgk lqmwvdlfpk algrpgppfn itprrarrff lrciiwntkd
     1861 vilddlsitg ekmsdiyvkg wmvgfeehkq ktdvhyrslg gegnfnwrfv fpfdylpaeq
     1921 vctvskkdaf wrldkteski parvvfqiwd ndkfsfddfl gslqldlnrm pkpaktaekc
     1981 svdqledtlh perfvslfeq ktvkgwwpcv adegekkila gklemtleiv teseheerpa
     2041 ghgrdepnmn pkledprrpd tsflwftspy ktmkfilwrr frcaiilffi lfifllflgi
     2101 fvysfpnyaa mklvkpfs
//
LOCUS       XP_061011668            2114 aa            linear   MAM 02-DEC-2023
DEFINITION  dysferlin isoform X10 [Dama dama].
ACCESSION   XP_061011668
VERSION     XP_061011668.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155685.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2114
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2114
                     /product="dysferlin isoform X10"
                     /calculated_mol_wt=240474
     Region          7..136
                     /region_name="C2A_Ferlin"
                     /note="C2 domain first repeat in Ferlin; cd08373"
                     /db_xref="CDD:176019"
     Region          251..360
                     /region_name="C2B_Ferlin"
                     /note="C2 domain second repeat in Ferlin; cd04011"
                     /db_xref="CDD:175978"
     Region          358..408
                     /region_name="FerI"
                     /note="FerI (NUC094) domain; pfam08151"
                     /db_xref="CDD:462377"
     Region          414..588
                     /region_name="C2C_Ferlin"
                     /note="C2 domain third repeat in Ferlin; cd04018"
                     /db_xref="CDD:175985"
     Site            order(445,451,499,501,513,515)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175985"
     Region          729..793
                     /region_name="FerA"
                     /note="FerA (NUC095) domain; pfam08165"
                     /db_xref="CDD:462389"
     Region          820..893
                     /region_name="FerB"
                     /note="FerB (NUC096) domain; pfam08150"
                     /db_xref="CDD:462376"
     Region          909..967
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          980..1036
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          1186..1314
                     /region_name="C2D_Ferlin"
                     /note="C2 domain fourth repeat in Ferlin; cd04017"
                     /db_xref="CDD:175984"
     Site            order(1202,1208,1264,1266)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175984"
     Region          1613..1736
                     /region_name="C2E_Ferlin"
                     /note="C2 domain fifth repeat in Ferlin; cd04037"
                     /db_xref="CDD:176002"
     Site            order(1628,1634,1683,1685,1690)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176002"
     Region          1847..1978
                     /region_name="C2F_Ferlin"
                     /note="C2 domain sixth repeat in Ferlin; cd08374"
                     /db_xref="CDD:176020"
     Region          1991..>2078
                     /region_name="Ferlin_C"
                     /note="Ferlin C-terminus; pfam16165"
                     /db_xref="CDD:435183"
     CDS             1..2114
                     /gene="DYSF"
                     /coded_by="XM_061155685.1:144..6488"
                     /db_xref="GeneID:133065045"
ORIGIN      
        1 mlscqlvras nlpslkkdrr sdpvasltfr gvkkrtkvik nnvnpvwneg fewdlkgipl
       61 dqgsellvvv kdhetmgrnr flgeaniplr evlatpslsa sfnaplldtk kqptgaslvl
      121 qvsytplpga mptfppltpl epsptlpdmd mvagrgqsra etwsllsdst vdtrcsgkkw
      181 laptdtggee dtedqgltgd eaepfldqsg algpgdpstl kkppshpppy hpggrrkkst
      241 paprkllsdk pqdfqirvqv iegrqlpgvn ikpvvkitaa gqtkrtrihk gnspffnetl
      301 ffnvfdspae lfnepifitv vdsrslrtda ligefrmdvg siyreprhay lrkwlllsdp
      361 ddfsagargy lkaslcvlgp gdeaplerkd psedkedies nllrpigval rgahfclkvf
      421 raedlpqmdd avmdnvrqif gfdsnkknlv dpfvevsfag kmlcsrilek tanpqwnqsv
      481 tlpamfpsmc ekmrirvidw drlthndiva ttylsmskis asggeieeep agvvkpppat
      541 dlddhlgflp tfgpcyinly gspreftgfp dpyaelntgk gegvayrgrl llsletklve
      601 hseqkveals addilrveky lrrrkyslfa afysatmlqd vddaiqfevs ignygnkfdt
      661 tclplasttq ysravfdgch yyylpwgnvk pvvvlssywe dishrveaqn qllriadqle
      721 agleqvhlal kaqcsdedad slvvqlvdel iagcsqplgd vqempsathl dqylyqlrtr
      781 hlsqiteaaq alklghselp aaleqaedwl lrlraladep qnslpdiviw mlqgdkrvay
      841 qrvpahevlf srrgasycgk ncgklqtifl kypmegvpga rmpvqirvrl wfglsvdeke
      901 fnqfaegkls vfaetyenqt klalvgnwgt tgltypkfsd itgriklpkd sfrpsagwaw
      961 agdwfvcpek tllhdtdagh lsfveevfen qtrlpggqwi ymsdnytdvn gekvlpkddi
     1021 ecplgwkwed eewstdlnra vdeqgweysi tippdrkprh wvpaekmyyt hrrrrwvrlr
     1081 rrdlsqmeal krhrqaeaeg egweyaslfg wkfhleyrkt dafrrrrwrr rmeplektgp
     1141 aavfalegal ggvvddrsed svsvstlsfg vnrptiscif dygnryhlrc ymyqardlpa
     1201 mdkdsfsdpy avvsflhqsq ktvvakntln ptwdqtlify eieifgepss iaeqppsivv
     1261 elydhdtygv defmgrcicq pslermprla wfpltrgsqp agellasfel iqrekpaihh
     1321 ipgfevqdtt gileesedtd lpypppqret niymvpqnik pvlqrtaiei lawglrnmks
     1381 yqlasvssps lvvecggqsv qscviknlrk npnfdictlf mevmlpreel ycppivvkvi
     1441 dnrqfgrrpv vgqctirsle sflcdpysed spspqggpdd vsllspgedv lididdkepl
     1501 ipiqeeefid wwskffasig esekcgsyle kdfdtlkvyd tplenvkafe glsdfcntfk
     1561 lyrgktqeet edpsvigefk glfkiyplpe dpaiplpprq fhqlasqgpq eclvrvyiir
     1621 afglqpkdpn gkcdpyikis igkksvsdqd nyipctlepv fgkmfeltct lplekdlkvt
     1681 lydydllskd ekigetvidl enrllskfga rcglpqtyci sgpnqwrdql rpsqllhlfc
     1741 qqrrvkapvy rtdrvvfqdk eytieeieag rvpnphlgpv eerlalhvlq qqglipehve
     1801 srplysplqp dieqgklqmw vdlfpkalgr pgppfnitpr rarrfflrci iwntkdvild
     1861 dlsitgekms diyvkgwmvg feehkqktdv hyrslggegn fnwrfvfpfd ylpaeqvctv
     1921 skkdafwrld kteskiparv vfqiwdndkf sfddflgslq ldlnrmpkpa ktaekcsvdq
     1981 ledtlhperf vslfeqktvk gwwpcvadeg ekkilagkle mtleivtese heerpaghgr
     2041 depnmnpkle dprrpdtsfl wftspyktmk filwrrfrca iilffilfif llflgifvys
     2101 fpnyaamklv kpfs
//
LOCUS       XP_061011669            2113 aa            linear   MAM 02-DEC-2023
DEFINITION  dysferlin isoform X11 [Dama dama].
ACCESSION   XP_061011669
VERSION     XP_061011669.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155686.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2113
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2113
                     /product="dysferlin isoform X11"
                     /calculated_mol_wt=240347
     Region          20..135
                     /region_name="C2A_Ferlin"
                     /note="C2 domain first repeat in Ferlin; cd08373"
                     /db_xref="CDD:176019"
     Region          250..359
                     /region_name="C2B_Ferlin"
                     /note="C2 domain second repeat in Ferlin; cd04011"
                     /db_xref="CDD:175978"
     Region          357..407
                     /region_name="FerI"
                     /note="FerI (NUC094) domain; pfam08151"
                     /db_xref="CDD:462377"
     Region          413..587
                     /region_name="C2C_Ferlin"
                     /note="C2 domain third repeat in Ferlin; cd04018"
                     /db_xref="CDD:175985"
     Site            order(444,450,498,500,512,514)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175985"
     Region          728..792
                     /region_name="FerA"
                     /note="FerA (NUC095) domain; pfam08165"
                     /db_xref="CDD:462389"
     Region          819..892
                     /region_name="FerB"
                     /note="FerB (NUC096) domain; pfam08150"
                     /db_xref="CDD:462376"
     Region          908..966
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          979..1035
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          1185..1313
                     /region_name="C2D_Ferlin"
                     /note="C2 domain fourth repeat in Ferlin; cd04017"
                     /db_xref="CDD:175984"
     Site            order(1201,1207,1263,1265)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175984"
     Region          1612..1735
                     /region_name="C2E_Ferlin"
                     /note="C2 domain fifth repeat in Ferlin; cd04037"
                     /db_xref="CDD:176002"
     Site            order(1627,1633,1682,1684,1689)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176002"
     Region          1846..1977
                     /region_name="C2F_Ferlin"
                     /note="C2 domain sixth repeat in Ferlin; cd08374"
                     /db_xref="CDD:176020"
     Region          1990..>2077
                     /region_name="Ferlin_C"
                     /note="Ferlin C-terminus; pfam16165"
                     /db_xref="CDD:435183"
     CDS             1..2113
                     /gene="DYSF"
                     /coded_by="XM_061155686.1:538..6879"
                     /db_xref="GeneID:133065045"
ORIGIN      
        1 mlrvfilyae nvhtpdtdis daycsavfag vkkrtkvikn nvnpvwnegf ewdlkgipld
       61 qgsellvvvk dhetmgrnrf lgeaniplre vlatpslsas fnaplldtkk qptgaslvlq
      121 vsytplpgam ptfppltple psptlpdmdm vagrgqsrae twsllsdstv dtrcsgkkwl
      181 aptdtggeed tedqgltgde aepfldqsga lgpgdpstlk kppshpppyh pggrrkkstp
      241 aprkllsdkp qdfqirvqvi egrqlpgvni kpvvkitaag qtkrtrihkg nspffnetlf
      301 fnvfdspael fnepifitvv dsrslrtdal igefrmdvgs iyreprhayl rkwlllsdpd
      361 dfsagargyl kaslcvlgpg deaplerkdp sedkediesn llrpigvalr gahfclkvfr
      421 aedlpqmdda vmdnvrqifg fdsnkknlvd pfvevsfagk mlcsrilekt anpqwnqsvt
      481 lpamfpsmce kmrirvidwd rlthndivat tylsmskisa sggeieeepa gvvkpppatd
      541 lddhlgflpt fgpcyinlyg spreftgfpd pyaelntgkg egvayrgrll lsletklveh
      601 seqkvealsa ddilrvekyl rrrkyslfaa fysatmlqdv ddaiqfevsi gnygnkfdtt
      661 clplasttqy sravfdgchy yylpwgnvkp vvvlssywed ishrveaqnq llriadqlea
      721 gleqvhlalk aqcsdedads lvvqlvdeli agcsqplgdv qempsathld qylyqlrtrh
      781 lsqiteaaqa lklghselpa aleqaedwll rlraladepq nslpdiviwm lqgdkrvayq
      841 rvpahevlfs rrgasycgkn cgklqtiflk ypmegvpgar mpvqirvrlw fglsvdekef
      901 nqfaegklsv faetyenqtk lalvgnwgtt gltypkfsdi tgriklpkds frpsagwawa
      961 gdwfvcpekt llhdtdaghl sfveevfenq trlpggqwiy msdnytdvng ekvlpkddie
     1021 cplgwkwede ewstdlnrav deqgweysit ippdrkprhw vpaekmyyth rrrrwvrlrr
     1081 rdlsqmealk rhrqaeaege gweyaslfgw kfhleyrktd afrrrrwrrr meplektgpa
     1141 avfalegalg gvvddrseds vsvstlsfgv nrptiscifd ygnryhlrcy myqardlpam
     1201 dkdsfsdpya vvsflhqsqk tvvakntlnp twdqtlifye ieifgepssi aeqppsivve
     1261 lydhdtygvd efmgrcicqp slermprlaw fpltrgsqpa gellasfeli qrekpaihhi
     1321 pgfevqdttg ileesedtdl pypppqretn iymvpqnikp vlqrtaieil awglrnmksy
     1381 qlasvsspsl vvecggqsvq scviknlrkn pnfdictlfm evmlpreely cppivvkvid
     1441 nrqfgrrpvv gqctirsles flcdpyseds pspqggpddv sllspgedvl ididdkepli
     1501 piqeeefidw wskffasige sekcgsylek dfdtlkvydt plenvkafeg lsdfcntfkl
     1561 yrgktqeete dpsvigefkg lfkiyplped paiplpprqf hqlasqgpqe clvrvyiira
     1621 fglqpkdpng kcdpyikisi gkksvsdqdn yipctlepvf gkmfeltctl plekdlkvtl
     1681 ydydllskde kigetvidle nrllskfgar cglpqtycis gpnqwrdqlr psqllhlfcq
     1741 qrrvkapvyr tdrvvfqdke ytieeieagr vpnphlgpve erlalhvlqq qglipehves
     1801 rplysplqpd ieqgklqmwv dlfpkalgrp gppfnitprr arrfflrcii wntkdvildd
     1861 lsitgekmsd iyvkgwmvgf eehkqktdvh yrslggegnf nwrfvfpfdy lpaeqvctvs
     1921 kkdafwrldk teskiparvv fqiwdndkfs fddflgslql dlnrmpkpak taekcsvdql
     1981 edtlhperfv slfeqktvkg wwpcvadege kkilagklem tleivteseh eerpaghgrd
     2041 epnmnpkled prrpdtsflw ftspyktmkf ilwrrfrcai ilffilfifl lflgifvysf
     2101 pnyaamklvk pfs
//
LOCUS       XP_061011670            2104 aa            linear   MAM 02-DEC-2023
DEFINITION  dysferlin isoform X12 [Dama dama].
ACCESSION   XP_061011670
VERSION     XP_061011670.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155687.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2104
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2104
                     /product="dysferlin isoform X12"
                     /calculated_mol_wt=239140
     Region          7..136
                     /region_name="C2A_Ferlin"
                     /note="C2 domain first repeat in Ferlin; cd08373"
                     /db_xref="CDD:176019"
     Region          220..329
                     /region_name="C2B_Ferlin"
                     /note="C2 domain second repeat in Ferlin; cd04011"
                     /db_xref="CDD:175978"
     Region          327..377
                     /region_name="FerI"
                     /note="FerI (NUC094) domain; pfam08151"
                     /db_xref="CDD:462377"
     Region          383..557
                     /region_name="C2C_Ferlin"
                     /note="C2 domain third repeat in Ferlin; cd04018"
                     /db_xref="CDD:175985"
     Site            order(414,420,468,470,482,484)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175985"
     Region          698..762
                     /region_name="FerA"
                     /note="FerA (NUC095) domain; pfam08165"
                     /db_xref="CDD:462389"
     Region          789..862
                     /region_name="FerB"
                     /note="FerB (NUC096) domain; pfam08150"
                     /db_xref="CDD:462376"
     Region          878..936
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          949..1005
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          1155..1283
                     /region_name="C2D_Ferlin"
                     /note="C2 domain fourth repeat in Ferlin; cd04017"
                     /db_xref="CDD:175984"
     Site            order(1171,1177,1233,1235)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175984"
     Region          1603..1726
                     /region_name="C2E_Ferlin"
                     /note="C2 domain fifth repeat in Ferlin; cd04037"
                     /db_xref="CDD:176002"
     Site            order(1618,1624,1673,1675,1680)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176002"
     Region          1837..1968
                     /region_name="C2F_Ferlin"
                     /note="C2 domain sixth repeat in Ferlin; cd08374"
                     /db_xref="CDD:176020"
     Region          1981..>2068
                     /region_name="Ferlin_C"
                     /note="Ferlin C-terminus; pfam16165"
                     /db_xref="CDD:435183"
     CDS             1..2104
                     /gene="DYSF"
                     /coded_by="XM_061155687.1:144..6458"
                     /db_xref="GeneID:133065045"
ORIGIN      
        1 mlscqlvras nlpslkkdrr sdpvasltfr gvkkrtkvik nnvnpvwneg fewdlkgipl
       61 dqgsellvvv kdhetmgrnr flgeaniplr evlatpslsa sfnaplldtk kqptgaslvl
      121 qvsytplpga mptfppltpl epsptlpdmd mvadtggeed tedqgltgde aepfldqsga
      181 lgpgdpstlk kppshpppyh pggrrkkstp aprkllsdkp qdfqirvqvi egrqlpgvni
      241 kpvvkitaag qtkrtrihkg nspffnetlf fnvfdspael fnepifitvv dsrslrtdal
      301 igefrmdvgs iyreprhayl rkwlllsdpd dfsagargyl kaslcvlgpg deaplerkdp
      361 sedkediesn llrpigvalr gahfclkvfr aedlpqmdda vmdnvrqifg fdsnkknlvd
      421 pfvevsfagk mlcsrilekt anpqwnqsvt lpamfpsmce kmrirvidwd rlthndivat
      481 tylsmskisa sggeieeepa gvvkpppatd lddhlgflpt fgpcyinlyg spreftgfpd
      541 pyaelntgkg egvayrgrll lsletklveh seqkvealsa ddilrvekyl rrrkyslfaa
      601 fysatmlqdv ddaiqfevsi gnygnkfdtt clplasttqy sravfdgchy yylpwgnvkp
      661 vvvlssywed ishrveaqnq llriadqlea gleqvhlalk aqcsdedads lvvqlvdeli
      721 agcsqplgdv qempsathld qylyqlrtrh lsqiteaaqa lklghselpa aleqaedwll
      781 rlraladepq nslpdiviwm lqgdkrvayq rvpahevlfs rrgasycgkn cgklqtiflk
      841 ypmegvpgar mpvqirvrlw fglsvdekef nqfaegklsv faetyenqtk lalvgnwgtt
      901 gltypkfsdi tgriklpkds frpsagwawa gdwfvcpekt llhdtdaghl sfveevfenq
      961 trlpggqwiy msdnytdvng ekvlpkddie cplgwkwede ewstdlnrav deqgweysit
     1021 ippdrkprhw vpaekmyyth rrrrwvrlrr rdlsqmealk rhrqaeaege gweyaslfgw
     1081 kfhleyrktd afrrrrwrrr meplektgpa avfalegalg gvvddrseds vsvstlsfgv
     1141 nrptiscifd ygnryhlrcy myqardlpam dkdsfsdpya vvsflhqsqk tvvakntlnp
     1201 twdqtlifye ieifgepssi aeqppsivve lydhdtygvd efmgrcicqp slermprlaw
     1261 fpltrgsqpa gellasfeli qrekpaihhi pgfevqdttg ileesedtdl pypppqretn
     1321 iymvpqnikp vlqrtaieil awglrnmksy qlasvsspsl vvecggqsvq scviknlrkn
     1381 pnfdictlfm evmlpreely cppivvkvid nrqfgrrpvv gqctirsles flcdpyseds
     1441 pspqggpddv sllspgedvl ididdkepli piqfadglsg laptnmassp sslheeefid
     1501 wwskffasig esekcgsyle kdfdtlkvyd tplenvkafe glsdfcntfk lyrgktqeet
     1561 edpsvigefk glfkiyplpe dpaiplpprq fhqlasqgpq eclvrvyiir afglqpkdpn
     1621 gkcdpyikis igkksvsdqd nyipctlepv fgkmfeltct lplekdlkvt lydydllskd
     1681 ekigetvidl enrllskfga rcglpqtyci sgpnqwrdql rpsqllhlfc qqrrvkapvy
     1741 rtdrvvfqdk eytieeieag rvpnphlgpv eerlalhvlq qqglipehve srplysplqp
     1801 dieqgklqmw vdlfpkalgr pgppfnitpr rarrfflrci iwntkdvild dlsitgekms
     1861 diyvkgwmvg feehkqktdv hyrslggegn fnwrfvfpfd ylpaeqvctv skkdafwrld
     1921 kteskiparv vfqiwdndkf sfddflgslq ldlnrmpkpa ktaekcsvdq ledtlhperf
     1981 vslfeqktvk gwwpcvadeg ekkilagkle mtleivtese heerpaghgr depnmnpkle
     2041 dprrpdtsfl wftspyktmk filwrrfrca iilffilfif llflgifvys fpnyaamklv
     2101 kpfs
//
LOCUS       XP_061011671            2103 aa            linear   MAM 02-DEC-2023
DEFINITION  dysferlin isoform X13 [Dama dama].
ACCESSION   XP_061011671
VERSION     XP_061011671.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155688.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2103
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2103
                     /product="dysferlin isoform X13"
                     /calculated_mol_wt=239013
     Region          20..135
                     /region_name="C2A_Ferlin"
                     /note="C2 domain first repeat in Ferlin; cd08373"
                     /db_xref="CDD:176019"
     Region          219..328
                     /region_name="C2B_Ferlin"
                     /note="C2 domain second repeat in Ferlin; cd04011"
                     /db_xref="CDD:175978"
     Region          326..376
                     /region_name="FerI"
                     /note="FerI (NUC094) domain; pfam08151"
                     /db_xref="CDD:462377"
     Region          382..556
                     /region_name="C2C_Ferlin"
                     /note="C2 domain third repeat in Ferlin; cd04018"
                     /db_xref="CDD:175985"
     Site            order(413,419,467,469,481,483)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175985"
     Region          697..761
                     /region_name="FerA"
                     /note="FerA (NUC095) domain; pfam08165"
                     /db_xref="CDD:462389"
     Region          788..861
                     /region_name="FerB"
                     /note="FerB (NUC096) domain; pfam08150"
                     /db_xref="CDD:462376"
     Region          877..935
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          948..1004
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          1154..1282
                     /region_name="C2D_Ferlin"
                     /note="C2 domain fourth repeat in Ferlin; cd04017"
                     /db_xref="CDD:175984"
     Site            order(1170,1176,1232,1234)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175984"
     Region          1602..1725
                     /region_name="C2E_Ferlin"
                     /note="C2 domain fifth repeat in Ferlin; cd04037"
                     /db_xref="CDD:176002"
     Site            order(1617,1623,1672,1674,1679)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176002"
     Region          1836..1967
                     /region_name="C2F_Ferlin"
                     /note="C2 domain sixth repeat in Ferlin; cd08374"
                     /db_xref="CDD:176020"
     Region          1980..>2067
                     /region_name="Ferlin_C"
                     /note="Ferlin C-terminus; pfam16165"
                     /db_xref="CDD:435183"
     CDS             1..2103
                     /gene="DYSF"
                     /coded_by="XM_061155688.1:539..6850"
                     /db_xref="GeneID:133065045"
ORIGIN      
        1 mlrvfilyae nvhtpdtdis daycsavfag vkkrtkvikn nvnpvwnegf ewdlkgipld
       61 qgsellvvvk dhetmgrnrf lgeaniplre vlatpslsas fnaplldtkk qptgaslvlq
      121 vsytplpgam ptfppltple psptlpdmdm vadtggeedt edqgltgdea epfldqsgal
      181 gpgdpstlkk ppshpppyhp ggrrkkstpa prkllsdkpq dfqirvqvie grqlpgvnik
      241 pvvkitaagq tkrtrihkgn spffnetlff nvfdspaelf nepifitvvd srslrtdali
      301 gefrmdvgsi yreprhaylr kwlllsdpdd fsagargylk aslcvlgpgd eaplerkdps
      361 edkediesnl lrpigvalrg ahfclkvfra edlpqmddav mdnvrqifgf dsnkknlvdp
      421 fvevsfagkm lcsrilekta npqwnqsvtl pamfpsmcek mrirvidwdr lthndivatt
      481 ylsmskisas ggeieeepag vvkpppatdl ddhlgflptf gpcyinlygs preftgfpdp
      541 yaelntgkge gvayrgrlll sletklvehs eqkvealsad dilrvekylr rrkyslfaaf
      601 ysatmlqdvd daiqfevsig nygnkfdttc lplasttqys ravfdgchyy ylpwgnvkpv
      661 vvlssywedi shrveaqnql lriadqleag leqvhlalka qcsdedadsl vvqlvdelia
      721 gcsqplgdvq empsathldq ylyqlrtrhl sqiteaaqal klghselpaa leqaedwllr
      781 lraladepqn slpdiviwml qgdkrvayqr vpahevlfsr rgasycgknc gklqtiflky
      841 pmegvpgarm pvqirvrlwf glsvdekefn qfaegklsvf aetyenqtkl alvgnwgttg
      901 ltypkfsdit griklpkdsf rpsagwawag dwfvcpektl lhdtdaghls fveevfenqt
      961 rlpggqwiym sdnytdvnge kvlpkddiec plgwkwedee wstdlnravd eqgweysiti
     1021 ppdrkprhwv paekmyythr rrrwvrlrrr dlsqmealkr hrqaeaegeg weyaslfgwk
     1081 fhleyrktda frrrrwrrrm eplektgpaa vfalegalgg vvddrsedsv svstlsfgvn
     1141 rptiscifdy gnryhlrcym yqardlpamd kdsfsdpyav vsflhqsqkt vvakntlnpt
     1201 wdqtlifyei eifgepssia eqppsivvel ydhdtygvde fmgrcicqps lermprlawf
     1261 pltrgsqpag ellasfeliq rekpaihhip gfevqdttgi leesedtdlp ypppqretni
     1321 ymvpqnikpv lqrtaieila wglrnmksyq lasvsspslv vecggqsvqs cviknlrknp
     1381 nfdictlfme vmlpreelyc ppivvkvidn rqfgrrpvvg qctirslesf lcdpysedsp
     1441 spqggpddvs llspgedvli diddkeplip iqfadglsgl aptnmassps slheeefidw
     1501 wskffasige sekcgsylek dfdtlkvydt plenvkafeg lsdfcntfkl yrgktqeete
     1561 dpsvigefkg lfkiyplped paiplpprqf hqlasqgpqe clvrvyiira fglqpkdpng
     1621 kcdpyikisi gkksvsdqdn yipctlepvf gkmfeltctl plekdlkvtl ydydllskde
     1681 kigetvidle nrllskfgar cglpqtycis gpnqwrdqlr psqllhlfcq qrrvkapvyr
     1741 tdrvvfqdke ytieeieagr vpnphlgpve erlalhvlqq qglipehves rplysplqpd
     1801 ieqgklqmwv dlfpkalgrp gppfnitprr arrfflrcii wntkdvildd lsitgekmsd
     1861 iyvkgwmvgf eehkqktdvh yrslggegnf nwrfvfpfdy lpaeqvctvs kkdafwrldk
     1921 teskiparvv fqiwdndkfs fddflgslql dlnrmpkpak taekcsvdql edtlhperfv
     1981 slfeqktvkg wwpcvadege kkilagklem tleivteseh eerpaghgrd epnmnpkled
     2041 prrpdtsflw ftspyktmkf ilwrrfrcai ilffilfifl lflgifvysf pnyaamklvk
     2101 pfs
//
LOCUS       XP_061011672            2100 aa            linear   MAM 02-DEC-2023
DEFINITION  dysferlin isoform X14 [Dama dama].
ACCESSION   XP_061011672
VERSION     XP_061011672.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155689.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2100
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2100
                     /product="dysferlin isoform X14"
                     /calculated_mol_wt=239072
     Region          7..136
                     /region_name="C2A_Ferlin"
                     /note="C2 domain first repeat in Ferlin; cd08373"
                     /db_xref="CDD:176019"
     Region          251..360
                     /region_name="C2B_Ferlin"
                     /note="C2 domain second repeat in Ferlin; cd04011"
                     /db_xref="CDD:175978"
     Region          358..408
                     /region_name="FerI"
                     /note="FerI (NUC094) domain; pfam08151"
                     /db_xref="CDD:462377"
     Region          414..574
                     /region_name="C2C_Ferlin"
                     /note="C2 domain third repeat in Ferlin; cd04018"
                     /db_xref="CDD:175985"
     Site            order(445,451,499,501,513,515)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175985"
     Region          715..779
                     /region_name="FerA"
                     /note="FerA (NUC095) domain; pfam08165"
                     /db_xref="CDD:462389"
     Region          806..879
                     /region_name="FerB"
                     /note="FerB (NUC096) domain; pfam08150"
                     /db_xref="CDD:462376"
     Region          895..953
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          966..1022
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          1172..1300
                     /region_name="C2D_Ferlin"
                     /note="C2 domain fourth repeat in Ferlin; cd04017"
                     /db_xref="CDD:175984"
     Site            order(1188,1194,1250,1252)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175984"
     Region          1599..1722
                     /region_name="C2E_Ferlin"
                     /note="C2 domain fifth repeat in Ferlin; cd04037"
                     /db_xref="CDD:176002"
     Site            order(1614,1620,1669,1671,1676)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176002"
     Region          1833..1964
                     /region_name="C2F_Ferlin"
                     /note="C2 domain sixth repeat in Ferlin; cd08374"
                     /db_xref="CDD:176020"
     Region          1977..>2064
                     /region_name="Ferlin_C"
                     /note="Ferlin C-terminus; pfam16165"
                     /db_xref="CDD:435183"
     CDS             1..2100
                     /gene="DYSF"
                     /coded_by="XM_061155689.1:144..6446"
                     /db_xref="GeneID:133065045"
ORIGIN      
        1 mlscqlvras nlpslkkdrr sdpvasltfr gvkkrtkvik nnvnpvwneg fewdlkgipl
       61 dqgsellvvv kdhetmgrnr flgeaniplr evlatpslsa sfnaplldtk kqptgaslvl
      121 qvsytplpga mptfppltpl epsptlpdmd mvagrgqsra etwsllsdst vdtrcsgkkw
      181 laptdtggee dtedqgltgd eaepfldqsg algpgdpstl kkppshpppy hpggrrkkst
      241 paprkllsdk pqdfqirvqv iegrqlpgvn ikpvvkitaa gqtkrtrihk gnspffnetl
      301 ffnvfdspae lfnepifitv vdsrslrtda ligefrmdvg siyreprhay lrkwlllsdp
      361 ddfsagargy lkaslcvlgp gdeaplerkd psedkedies nllrpigval rgahfclkvf
      421 raedlpqmdd avmdnvrqif gfdsnkknlv dpfvevsfag kmlcsrilek tanpqwnqsv
      481 tlpamfpsmc ekmrirvidw drlthndiva ttylsmskis asggeievdd hlgflptfgp
      541 cyinlygspr eftgfpdpya elntgkgegv ayrgrlllsl etklvehseq kvealsaddi
      601 lrvekylrrr kyslfaafys atmlqdvdda iqfevsigny gnkfdttclp lasttqysra
      661 vfdgchyyyl pwgnvkpvvv lssywedish rveaqnqllr iadqleagle qvhlalkaqc
      721 sdedadslvv qlvdeliagc sqplgdvqem psathldqyl yqlrtrhlsq iteaaqalkl
      781 ghselpaale qaedwllrlr aladepqnsl pdiviwmlqg dkrvayqrvp ahevlfsrrg
      841 asycgkncgk lqtiflkypm egvpgarmpv qirvrlwfgl svdekefnqf aegklsvfae
      901 tyenqtklal vgnwgttglt ypkfsditgr iklpkdsfrp sagwawagdw fvcpektllh
      961 dtdaghlsfv eevfenqtrl pggqwiymsd nytdvngekv lpkddiecpl gwkwedeews
     1021 tdlnravdeq gweysitipp drkprhwvpa ekmyythrrr rwvrlrrrdl sqmealkrhr
     1081 qaeaegegwe yaslfgwkfh leyrktdafr rrrwrrrmep lektgpaavf alegalggvv
     1141 ddrsedsvsv stlsfgvnrp tiscifdygn ryhlrcymyq ardlpamdkd sfsdpyavvs
     1201 flhqsqktvv akntlnptwd qtlifyeiei fgepssiaeq ppsivvelyd hdtygvdefm
     1261 grcicqpsle rmprlawfpl trgsqpagel lasfeliqre kpaihhipgf evqdttgile
     1321 esedtdlpyp ppqretniym vpqnikpvlq rtaieilawg lrnmksyqla svsspslvve
     1381 cggqsvqscv iknlrknpnf dictlfmevm lpreelycpp ivvkvidnrq fgrrpvvgqc
     1441 tirslesflc dpysedspsp qggpddvsll spgedvlidi ddkeplipiq eeefidwwsk
     1501 ffasigesek cgsylekdfd tlkvydtple nvkafeglsd fcntfklyrg ktqeetedps
     1561 vigefkglfk iyplpedpai plpprqfhql asqgpqeclv rvyiirafgl qpkdpngkcd
     1621 pyikisigkk svsdqdnyip ctlepvfgkm feltctlple kdlkvtlydy dllskdekig
     1681 etvidlenrl lskfgarcgl pqtycisgpn qwrdqlrpsq llhlfcqqrr vkapvyrtdr
     1741 vvfqdkeyti eeieagrvpn phlgpveerl alhvlqqqgl ipehvesrpl ysplqpdieq
     1801 gklqmwvdlf pkalgrpgpp fnitprrarr fflrciiwnt kdvilddlsi tgekmsdiyv
     1861 kgwmvgfeeh kqktdvhyrs lggegnfnwr fvfpfdylpa eqvctvskkd afwrldktes
     1921 kiparvvfqi wdndkfsfdd flgslqldln rmpkpaktae kcsvdqledt lhperfvslf
     1981 eqktvkgwwp cvadegekki lagklemtle ivteseheer paghgrdepn mnpkledprr
     2041 pdtsflwfts pyktmkfilw rrfrcaiilf filfifllfl gifvysfpny aamklvkpfs
//
LOCUS       XP_061011673            2099 aa            linear   MAM 02-DEC-2023
DEFINITION  dysferlin isoform X15 [Dama dama].
ACCESSION   XP_061011673
VERSION     XP_061011673.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155690.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2099
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2099
                     /product="dysferlin isoform X15"
                     /calculated_mol_wt=238945
     Region          20..135
                     /region_name="C2A_Ferlin"
                     /note="C2 domain first repeat in Ferlin; cd08373"
                     /db_xref="CDD:176019"
     Region          250..359
                     /region_name="C2B_Ferlin"
                     /note="C2 domain second repeat in Ferlin; cd04011"
                     /db_xref="CDD:175978"
     Region          357..407
                     /region_name="FerI"
                     /note="FerI (NUC094) domain; pfam08151"
                     /db_xref="CDD:462377"
     Region          413..573
                     /region_name="C2C_Ferlin"
                     /note="C2 domain third repeat in Ferlin; cd04018"
                     /db_xref="CDD:175985"
     Site            order(444,450,498,500,512,514)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175985"
     Region          714..778
                     /region_name="FerA"
                     /note="FerA (NUC095) domain; pfam08165"
                     /db_xref="CDD:462389"
     Region          805..878
                     /region_name="FerB"
                     /note="FerB (NUC096) domain; pfam08150"
                     /db_xref="CDD:462376"
     Region          894..952
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          965..1021
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          1171..1299
                     /region_name="C2D_Ferlin"
                     /note="C2 domain fourth repeat in Ferlin; cd04017"
                     /db_xref="CDD:175984"
     Site            order(1187,1193,1249,1251)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175984"
     Region          1598..1721
                     /region_name="C2E_Ferlin"
                     /note="C2 domain fifth repeat in Ferlin; cd04037"
                     /db_xref="CDD:176002"
     Site            order(1613,1619,1668,1670,1675)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176002"
     Region          1832..1963
                     /region_name="C2F_Ferlin"
                     /note="C2 domain sixth repeat in Ferlin; cd08374"
                     /db_xref="CDD:176020"
     Region          1976..>2063
                     /region_name="Ferlin_C"
                     /note="Ferlin C-terminus; pfam16165"
                     /db_xref="CDD:435183"
     CDS             1..2099
                     /gene="DYSF"
                     /coded_by="XM_061155690.1:537..6836"
                     /db_xref="GeneID:133065045"
ORIGIN      
        1 mlrvfilyae nvhtpdtdis daycsavfag vkkrtkvikn nvnpvwnegf ewdlkgipld
       61 qgsellvvvk dhetmgrnrf lgeaniplre vlatpslsas fnaplldtkk qptgaslvlq
      121 vsytplpgam ptfppltple psptlpdmdm vagrgqsrae twsllsdstv dtrcsgkkwl
      181 aptdtggeed tedqgltgde aepfldqsga lgpgdpstlk kppshpppyh pggrrkkstp
      241 aprkllsdkp qdfqirvqvi egrqlpgvni kpvvkitaag qtkrtrihkg nspffnetlf
      301 fnvfdspael fnepifitvv dsrslrtdal igefrmdvgs iyreprhayl rkwlllsdpd
      361 dfsagargyl kaslcvlgpg deaplerkdp sedkediesn llrpigvalr gahfclkvfr
      421 aedlpqmdda vmdnvrqifg fdsnkknlvd pfvevsfagk mlcsrilekt anpqwnqsvt
      481 lpamfpsmce kmrirvidwd rlthndivat tylsmskisa sggeievddh lgflptfgpc
      541 yinlygspre ftgfpdpyae lntgkgegva yrgrlllsle tklvehseqk vealsaddil
      601 rvekylrrrk yslfaafysa tmlqdvddai qfevsignyg nkfdttclpl asttqysrav
      661 fdgchyyylp wgnvkpvvvl ssywedishr veaqnqllri adqleagleq vhlalkaqcs
      721 dedadslvvq lvdeliagcs qplgdvqemp sathldqyly qlrtrhlsqi teaaqalklg
      781 hselpaaleq aedwllrlra ladepqnslp diviwmlqgd krvayqrvpa hevlfsrrga
      841 sycgkncgkl qtiflkypme gvpgarmpvq irvrlwfgls vdekefnqfa egklsvfaet
      901 yenqtklalv gnwgttglty pkfsditgri klpkdsfrps agwawagdwf vcpektllhd
      961 tdaghlsfve evfenqtrlp ggqwiymsdn ytdvngekvl pkddiecplg wkwedeewst
     1021 dlnravdeqg weysitippd rkprhwvpae kmyythrrrr wvrlrrrdls qmealkrhrq
     1081 aeaegegwey aslfgwkfhl eyrktdafrr rrwrrrmepl ektgpaavfa legalggvvd
     1141 drsedsvsvs tlsfgvnrpt iscifdygnr yhlrcymyqa rdlpamdkds fsdpyavvsf
     1201 lhqsqktvva kntlnptwdq tlifyeieif gepssiaeqp psivvelydh dtygvdefmg
     1261 rcicqpsler mprlawfplt rgsqpagell asfeliqrek paihhipgfe vqdttgilee
     1321 sedtdlpypp pqretniymv pqnikpvlqr taieilawgl rnmksyqlas vsspslvvec
     1381 ggqsvqscvi knlrknpnfd ictlfmevml preelycppi vvkvidnrqf grrpvvgqct
     1441 irslesflcd pysedspspq ggpddvslls pgedvlidid dkeplipiqe eefidwwskf
     1501 fasigesekc gsylekdfdt lkvydtplen vkafeglsdf cntfklyrgk tqeetedpsv
     1561 igefkglfki yplpedpaip lpprqfhqla sqgpqeclvr vyiirafglq pkdpngkcdp
     1621 yikisigkks vsdqdnyipc tlepvfgkmf eltctlplek dlkvtlydyd llskdekige
     1681 tvidlenrll skfgarcglp qtycisgpnq wrdqlrpsql lhlfcqqrrv kapvyrtdrv
     1741 vfqdkeytie eieagrvpnp hlgpveerla lhvlqqqgli pehvesrply splqpdieqg
     1801 klqmwvdlfp kalgrpgppf nitprrarrf flrciiwntk dvilddlsit gekmsdiyvk
     1861 gwmvgfeehk qktdvhyrsl ggegnfnwrf vfpfdylpae qvctvskkda fwrldktesk
     1921 iparvvfqiw dndkfsfddf lgslqldlnr mpkpaktaek csvdqledtl hperfvslfe
     1981 qktvkgwwpc vadegekkil agklemtlei vteseheerp aghgrdepnm npkledprrp
     2041 dtsflwftsp yktmkfilwr rfrcaiilff ilfifllflg ifvysfpnya amklvkpfs
//
LOCUS       XP_061011674            2091 aa            linear   MAM 02-DEC-2023
DEFINITION  dysferlin isoform X16 [Dama dama].
ACCESSION   XP_061011674
VERSION     XP_061011674.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155691.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2091
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2091
                     /product="dysferlin isoform X16"
                     /calculated_mol_wt=237042
     Region          7..136
                     /region_name="C2A_Ferlin"
                     /note="C2 domain first repeat in Ferlin; cd08373"
                     /db_xref="CDD:176019"
     Region          251..360
                     /region_name="C2B_Ferlin"
                     /note="C2 domain second repeat in Ferlin; cd04011"
                     /db_xref="CDD:175978"
     Region          358..408
                     /region_name="FerI"
                     /note="FerI (NUC094) domain; pfam08151"
                     /db_xref="CDD:462377"
     Region          414..588
                     /region_name="C2C_Ferlin"
                     /note="C2 domain third repeat in Ferlin; cd04018"
                     /db_xref="CDD:175985"
     Site            order(445,451,499,501,513,515)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175985"
     Region          729..793
                     /region_name="FerA"
                     /note="FerA (NUC095) domain; pfam08165"
                     /db_xref="CDD:462389"
     Region          820..893
                     /region_name="FerB"
                     /note="FerB (NUC096) domain; pfam08150"
                     /db_xref="CDD:462376"
     Region          909..967
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          980..1036
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          1128..1256
                     /region_name="C2D_Ferlin"
                     /note="C2 domain fourth repeat in Ferlin; cd04017"
                     /db_xref="CDD:175984"
     Site            order(1144,1150,1206,1208)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175984"
     Region          1590..1713
                     /region_name="C2E_Ferlin"
                     /note="C2 domain fifth repeat in Ferlin; cd04037"
                     /db_xref="CDD:176002"
     Site            order(1605,1611,1660,1662,1667)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176002"
     Region          1824..1955
                     /region_name="C2F_Ferlin"
                     /note="C2 domain sixth repeat in Ferlin; cd08374"
                     /db_xref="CDD:176020"
     Region          1968..>2055
                     /region_name="Ferlin_C"
                     /note="Ferlin C-terminus; pfam16165"
                     /db_xref="CDD:435183"
     CDS             1..2091
                     /gene="DYSF"
                     /coded_by="XM_061155691.1:145..6420"
                     /db_xref="GeneID:133065045"
ORIGIN      
        1 mlscqlvras nlpslkkdrr sdpvasltfr gvkkrtkvik nnvnpvwneg fewdlkgipl
       61 dqgsellvvv kdhetmgrnr flgeaniplr evlatpslsa sfnaplldtk kqptgaslvl
      121 qvsytplpga mptfppltpl epsptlpdmd mvagrgqsra etwsllsdst vdtrcsgkkw
      181 laptdtggee dtedqgltgd eaepfldqsg algpgdpstl kkppshpppy hpggrrkkst
      241 paprkllsdk pqdfqirvqv iegrqlpgvn ikpvvkitaa gqtkrtrihk gnspffnetl
      301 ffnvfdspae lfnepifitv vdsrslrtda ligefrmdvg siyreprhay lrkwlllsdp
      361 ddfsagargy lkaslcvlgp gdeaplerkd psedkedies nllrpigval rgahfclkvf
      421 raedlpqmdd avmdnvrqif gfdsnkknlv dpfvevsfag kmlcsrilek tanpqwnqsv
      481 tlpamfpsmc ekmrirvidw drlthndiva ttylsmskis asggeieeep agvvkpppat
      541 dlddhlgflp tfgpcyinly gspreftgfp dpyaelntgk gegvayrgrl llsletklve
      601 hseqkveals addilrveky lrrrkyslfa afysatmlqd vddaiqfevs ignygnkfdt
      661 tclplasttq ysravfdgch yyylpwgnvk pvvvlssywe dishrveaqn qllriadqle
      721 agleqvhlal kaqcsdedad slvvqlvdel iagcsqplgd vqempsathl dqylyqlrtr
      781 hlsqiteaaq alklghselp aaleqaedwl lrlraladep qnslpdiviw mlqgdkrvay
      841 qrvpahevlf srrgasycgk ncgklqtifl kypmegvpga rmpvqirvrl wfglsvdeke
      901 fnqfaegkls vfaetyenqt klalvgnwgt tgltypkfsd itgriklpkd sfrpsagwaw
      961 agdwfvcpek tllhdtdagh lsfveevfen qtrlpggqwi ymsdnytdvn gekvlpkddi
     1021 ecplgwkwed eewstdlnra vdeqgweysi tippdrkprh wvpaekmyyt hrrrrwvrlr
     1081 rrdlsqmeal krggvvddrs edsvsvstls fgvnrptisc ifdygnryhl rcymyqardl
     1141 pamdkdsfsd pyavvsflhq sqktvvaknt lnptwdqtli fyeieifgep ssiaeqppsi
     1201 vvelydhdty gvdefmgrci cqpslermpr lawfpltrgs qpagellasf eliqrekpai
     1261 hhipgfevqd ttgileelca pafflqgllp tsedtdlpyp ppqretniym vpqnikpvlq
     1321 rtaieilawg lrnmksyqla svsspslvve cggqsvqscv iknlrknpnf dictlfmevm
     1381 lpreelycpp ivvkvidnrq fgrrpvvgqc tirslesflc dpysedspsp qggpddvsll
     1441 spgedvlidi ddkeplipiq fadglsglap tnmasspssl heeefidwws kffasigese
     1501 kcgsylekdf dtlkvydtpl envkafegls dfcntfklyr gktqeetedp svigefkglf
     1561 kiyplpedpa iplpprqfhq lasqgpqecl vrvyiirafg lqpkdpngkc dpyikisigk
     1621 ksvsdqdnyi pctlepvfgk mfeltctlpl ekdlkvtlyd ydllskdeki getvidlenr
     1681 llskfgarcg lpqtycisgp nqwrdqlrps qllhlfcqqr rvkapvyrtd rvvfqdkeyt
     1741 ieeieagrvp nphlgpveer lalhvlqqqg lipehvesrp lysplqpdie qgklqmwvdl
     1801 fpkalgrpgp pfnitprrar rfflrciiwn tkdvilddls itgekmsdiy vkgwmvgfee
     1861 hkqktdvhyr slggegnfnw rfvfpfdylp aeqvctvskk dafwrldkte skiparvvfq
     1921 iwdndkfsfd dflgslqldl nrmpkpakta ekcsvdqled tlhperfvsl feqktvkgww
     1981 pcvadegekk ilagklemtl eivtesehee rpaghgrdep nmnpkledpr rpdtsflwft
     2041 spyktmkfil wrrfrcaiil ffilfifllf lgifvysfpn yaamklvkpf s
//
LOCUS       XP_061011675            2090 aa            linear   MAM 02-DEC-2023
DEFINITION  dysferlin isoform X17 [Dama dama].
ACCESSION   XP_061011675
VERSION     XP_061011675.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155692.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2090
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2090
                     /product="dysferlin isoform X17"
                     /calculated_mol_wt=237737
     Region          7..136
                     /region_name="C2A_Ferlin"
                     /note="C2 domain first repeat in Ferlin; cd08373"
                     /db_xref="CDD:176019"
     Region          220..329
                     /region_name="C2B_Ferlin"
                     /note="C2 domain second repeat in Ferlin; cd04011"
                     /db_xref="CDD:175978"
     Region          327..377
                     /region_name="FerI"
                     /note="FerI (NUC094) domain; pfam08151"
                     /db_xref="CDD:462377"
     Region          383..543
                     /region_name="C2C_Ferlin"
                     /note="C2 domain third repeat in Ferlin; cd04018"
                     /db_xref="CDD:175985"
     Site            order(414,420,468,470,482,484)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175985"
     Region          684..748
                     /region_name="FerA"
                     /note="FerA (NUC095) domain; pfam08165"
                     /db_xref="CDD:462389"
     Region          775..848
                     /region_name="FerB"
                     /note="FerB (NUC096) domain; pfam08150"
                     /db_xref="CDD:462376"
     Region          864..922
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          935..991
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          1141..1269
                     /region_name="C2D_Ferlin"
                     /note="C2 domain fourth repeat in Ferlin; cd04017"
                     /db_xref="CDD:175984"
     Site            order(1157,1163,1219,1221)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175984"
     Region          1589..1712
                     /region_name="C2E_Ferlin"
                     /note="C2 domain fifth repeat in Ferlin; cd04037"
                     /db_xref="CDD:176002"
     Site            order(1604,1610,1659,1661,1666)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176002"
     Region          1823..1954
                     /region_name="C2F_Ferlin"
                     /note="C2 domain sixth repeat in Ferlin; cd08374"
                     /db_xref="CDD:176020"
     Region          1967..>2054
                     /region_name="Ferlin_C"
                     /note="Ferlin C-terminus; pfam16165"
                     /db_xref="CDD:435183"
     CDS             1..2090
                     /gene="DYSF"
                     /coded_by="XM_061155692.1:144..6416"
                     /db_xref="GeneID:133065045"
ORIGIN      
        1 mlscqlvras nlpslkkdrr sdpvasltfr gvkkrtkvik nnvnpvwneg fewdlkgipl
       61 dqgsellvvv kdhetmgrnr flgeaniplr evlatpslsa sfnaplldtk kqptgaslvl
      121 qvsytplpga mptfppltpl epsptlpdmd mvadtggeed tedqgltgde aepfldqsga
      181 lgpgdpstlk kppshpppyh pggrrkkstp aprkllsdkp qdfqirvqvi egrqlpgvni
      241 kpvvkitaag qtkrtrihkg nspffnetlf fnvfdspael fnepifitvv dsrslrtdal
      301 igefrmdvgs iyreprhayl rkwlllsdpd dfsagargyl kaslcvlgpg deaplerkdp
      361 sedkediesn llrpigvalr gahfclkvfr aedlpqmdda vmdnvrqifg fdsnkknlvd
      421 pfvevsfagk mlcsrilekt anpqwnqsvt lpamfpsmce kmrirvidwd rlthndivat
      481 tylsmskisa sggeievddh lgflptfgpc yinlygspre ftgfpdpyae lntgkgegva
      541 yrgrlllsle tklvehseqk vealsaddil rvekylrrrk yslfaafysa tmlqdvddai
      601 qfevsignyg nkfdttclpl asttqysrav fdgchyyylp wgnvkpvvvl ssywedishr
      661 veaqnqllri adqleagleq vhlalkaqcs dedadslvvq lvdeliagcs qplgdvqemp
      721 sathldqyly qlrtrhlsqi teaaqalklg hselpaaleq aedwllrlra ladepqnslp
      781 diviwmlqgd krvayqrvpa hevlfsrrga sycgkncgkl qtiflkypme gvpgarmpvq
      841 irvrlwfgls vdekefnqfa egklsvfaet yenqtklalv gnwgttglty pkfsditgri
      901 klpkdsfrps agwawagdwf vcpektllhd tdaghlsfve evfenqtrlp ggqwiymsdn
      961 ytdvngekvl pkddiecplg wkwedeewst dlnravdeqg weysitippd rkprhwvpae
     1021 kmyythrrrr wvrlrrrdls qmealkrhrq aeaegegwey aslfgwkfhl eyrktdafrr
     1081 rrwrrrmepl ektgpaavfa legalggvvd drsedsvsvs tlsfgvnrpt iscifdygnr
     1141 yhlrcymyqa rdlpamdkds fsdpyavvsf lhqsqktvva kntlnptwdq tlifyeieif
     1201 gepssiaeqp psivvelydh dtygvdefmg rcicqpsler mprlawfplt rgsqpagell
     1261 asfeliqrek paihhipgfe vqdttgilee sedtdlpypp pqretniymv pqnikpvlqr
     1321 taieilawgl rnmksyqlas vsspslvvec ggqsvqscvi knlrknpnfd ictlfmevml
     1381 preelycppi vvkvidnrqf grrpvvgqct irslesflcd pysedspspq ggpddvslls
     1441 pgedvlidid dkeplipiqf adglsglapt nmasspsslh eeefidwwsk ffasigesek
     1501 cgsylekdfd tlkvydtple nvkafeglsd fcntfklyrg ktqeetedps vigefkglfk
     1561 iyplpedpai plpprqfhql asqgpqeclv rvyiirafgl qpkdpngkcd pyikisigkk
     1621 svsdqdnyip ctlepvfgkm feltctlple kdlkvtlydy dllskdekig etvidlenrl
     1681 lskfgarcgl pqtycisgpn qwrdqlrpsq llhlfcqqrr vkapvyrtdr vvfqdkeyti
     1741 eeieagrvpn phlgpveerl alhvlqqqgl ipehvesrpl ysplqpdieq gklqmwvdlf
     1801 pkalgrpgpp fnitprrarr fflrciiwnt kdvilddlsi tgekmsdiyv kgwmvgfeeh
     1861 kqktdvhyrs lggegnfnwr fvfpfdylpa eqvctvskkd afwrldktes kiparvvfqi
     1921 wdndkfsfdd flgslqldln rmpkpaktae kcsvdqledt lhperfvslf eqktvkgwwp
     1981 cvadegekki lagklemtle ivteseheer paghgrdepn mnpkledprr pdtsflwfts
     2041 pyktmkfilw rrfrcaiilf filfifllfl gifvysfpny aamklvkpfs
//
LOCUS       XP_061011676            2089 aa            linear   MAM 02-DEC-2023
DEFINITION  dysferlin isoform X18 [Dama dama].
ACCESSION   XP_061011676
VERSION     XP_061011676.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155693.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2089
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2089
                     /product="dysferlin isoform X18"
                     /calculated_mol_wt=237610
     Region          20..135
                     /region_name="C2A_Ferlin"
                     /note="C2 domain first repeat in Ferlin; cd08373"
                     /db_xref="CDD:176019"
     Region          219..328
                     /region_name="C2B_Ferlin"
                     /note="C2 domain second repeat in Ferlin; cd04011"
                     /db_xref="CDD:175978"
     Region          326..376
                     /region_name="FerI"
                     /note="FerI (NUC094) domain; pfam08151"
                     /db_xref="CDD:462377"
     Region          382..542
                     /region_name="C2C_Ferlin"
                     /note="C2 domain third repeat in Ferlin; cd04018"
                     /db_xref="CDD:175985"
     Site            order(413,419,467,469,481,483)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175985"
     Region          683..747
                     /region_name="FerA"
                     /note="FerA (NUC095) domain; pfam08165"
                     /db_xref="CDD:462389"
     Region          774..847
                     /region_name="FerB"
                     /note="FerB (NUC096) domain; pfam08150"
                     /db_xref="CDD:462376"
     Region          863..921
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          934..990
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          1140..1268
                     /region_name="C2D_Ferlin"
                     /note="C2 domain fourth repeat in Ferlin; cd04017"
                     /db_xref="CDD:175984"
     Site            order(1156,1162,1218,1220)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175984"
     Region          1588..1711
                     /region_name="C2E_Ferlin"
                     /note="C2 domain fifth repeat in Ferlin; cd04037"
                     /db_xref="CDD:176002"
     Site            order(1603,1609,1658,1660,1665)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176002"
     Region          1822..1953
                     /region_name="C2F_Ferlin"
                     /note="C2 domain sixth repeat in Ferlin; cd08374"
                     /db_xref="CDD:176020"
     Region          1966..>2053
                     /region_name="Ferlin_C"
                     /note="Ferlin C-terminus; pfam16165"
                     /db_xref="CDD:435183"
     CDS             1..2089
                     /gene="DYSF"
                     /coded_by="XM_061155693.1:538..6807"
                     /db_xref="GeneID:133065045"
ORIGIN      
        1 mlrvfilyae nvhtpdtdis daycsavfag vkkrtkvikn nvnpvwnegf ewdlkgipld
       61 qgsellvvvk dhetmgrnrf lgeaniplre vlatpslsas fnaplldtkk qptgaslvlq
      121 vsytplpgam ptfppltple psptlpdmdm vadtggeedt edqgltgdea epfldqsgal
      181 gpgdpstlkk ppshpppyhp ggrrkkstpa prkllsdkpq dfqirvqvie grqlpgvnik
      241 pvvkitaagq tkrtrihkgn spffnetlff nvfdspaelf nepifitvvd srslrtdali
      301 gefrmdvgsi yreprhaylr kwlllsdpdd fsagargylk aslcvlgpgd eaplerkdps
      361 edkediesnl lrpigvalrg ahfclkvfra edlpqmddav mdnvrqifgf dsnkknlvdp
      421 fvevsfagkm lcsrilekta npqwnqsvtl pamfpsmcek mrirvidwdr lthndivatt
      481 ylsmskisas ggeievddhl gflptfgpcy inlygspref tgfpdpyael ntgkgegvay
      541 rgrlllslet klvehseqkv ealsaddilr vekylrrrky slfaafysat mlqdvddaiq
      601 fevsignygn kfdttclpla sttqysravf dgchyyylpw gnvkpvvvls sywedishrv
      661 eaqnqllria dqleagleqv hlalkaqcsd edadslvvql vdeliagcsq plgdvqemps
      721 athldqylyq lrtrhlsqit eaaqalklgh selpaaleqa edwllrlral adepqnslpd
      781 iviwmlqgdk rvayqrvpah evlfsrrgas ycgkncgklq tiflkypmeg vpgarmpvqi
      841 rvrlwfglsv dekefnqfae gklsvfaety enqtklalvg nwgttgltyp kfsditgrik
      901 lpkdsfrpsa gwawagdwfv cpektllhdt daghlsfvee vfenqtrlpg gqwiymsdny
      961 tdvngekvlp kddiecplgw kwedeewstd lnravdeqgw eysitippdr kprhwvpaek
     1021 myythrrrrw vrlrrrdlsq mealkrhrqa eaegegweya slfgwkfhle yrktdafrrr
     1081 rwrrrmeple ktgpaavfal egalggvvdd rsedsvsvst lsfgvnrpti scifdygnry
     1141 hlrcymyqar dlpamdkdsf sdpyavvsfl hqsqktvvak ntlnptwdqt lifyeieifg
     1201 epssiaeqpp sivvelydhd tygvdefmgr cicqpslerm prlawfpltr gsqpagella
     1261 sfeliqrekp aihhipgfev qdttgilees edtdlpyppp qretniymvp qnikpvlqrt
     1321 aieilawglr nmksyqlasv sspslvvecg gqsvqscvik nlrknpnfdi ctlfmevmlp
     1381 reelycppiv vkvidnrqfg rrpvvgqcti rslesflcdp ysedspspqg gpddvsllsp
     1441 gedvlididd keplipiqfa dglsglaptn masspsslhe eefidwwskf fasigesekc
     1501 gsylekdfdt lkvydtplen vkafeglsdf cntfklyrgk tqeetedpsv igefkglfki
     1561 yplpedpaip lpprqfhqla sqgpqeclvr vyiirafglq pkdpngkcdp yikisigkks
     1621 vsdqdnyipc tlepvfgkmf eltctlplek dlkvtlydyd llskdekige tvidlenrll
     1681 skfgarcglp qtycisgpnq wrdqlrpsql lhlfcqqrrv kapvyrtdrv vfqdkeytie
     1741 eieagrvpnp hlgpveerla lhvlqqqgli pehvesrply splqpdieqg klqmwvdlfp
     1801 kalgrpgppf nitprrarrf flrciiwntk dvilddlsit gekmsdiyvk gwmvgfeehk
     1861 qktdvhyrsl ggegnfnwrf vfpfdylpae qvctvskkda fwrldktesk iparvvfqiw
     1921 dndkfsfddf lgslqldlnr mpkpaktaek csvdqledtl hperfvslfe qktvkgwwpc
     1981 vadegekkil agklemtlei vteseheerp aghgrdepnm npkledprrp dtsflwftsp
     2041 yktmkfilwr rfrcaiilff ilfifllflg ifvysfpnya amklvkpfs
//
LOCUS       XP_061011677            2083 aa            linear   MAM 02-DEC-2023
DEFINITION  dysferlin isoform X19 [Dama dama].
ACCESSION   XP_061011677
VERSION     XP_061011677.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155694.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2083
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2083
                     /product="dysferlin isoform X19"
                     /calculated_mol_wt=237098
     Region          7..136
                     /region_name="C2A_Ferlin"
                     /note="C2 domain first repeat in Ferlin; cd08373"
                     /db_xref="CDD:176019"
     Region          220..329
                     /region_name="C2B_Ferlin"
                     /note="C2 domain second repeat in Ferlin; cd04011"
                     /db_xref="CDD:175978"
     Region          327..377
                     /region_name="FerI"
                     /note="FerI (NUC094) domain; pfam08151"
                     /db_xref="CDD:462377"
     Region          383..557
                     /region_name="C2C_Ferlin"
                     /note="C2 domain third repeat in Ferlin; cd04018"
                     /db_xref="CDD:175985"
     Site            order(414,420,468,470,482,484)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175985"
     Region          698..762
                     /region_name="FerA"
                     /note="FerA (NUC095) domain; pfam08165"
                     /db_xref="CDD:462389"
     Region          789..862
                     /region_name="FerB"
                     /note="FerB (NUC096) domain; pfam08150"
                     /db_xref="CDD:462376"
     Region          878..936
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          949..1005
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          1155..1283
                     /region_name="C2D_Ferlin"
                     /note="C2 domain fourth repeat in Ferlin; cd04017"
                     /db_xref="CDD:175984"
     Site            order(1171,1177,1233,1235)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175984"
     Region          1582..1705
                     /region_name="C2E_Ferlin"
                     /note="C2 domain fifth repeat in Ferlin; cd04037"
                     /db_xref="CDD:176002"
     Site            order(1597,1603,1652,1654,1659)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176002"
     Region          1816..1947
                     /region_name="C2F_Ferlin"
                     /note="C2 domain sixth repeat in Ferlin; cd08374"
                     /db_xref="CDD:176020"
     Region          1960..>2047
                     /region_name="Ferlin_C"
                     /note="Ferlin C-terminus; pfam16165"
                     /db_xref="CDD:435183"
     CDS             1..2083
                     /gene="DYSF"
                     /coded_by="XM_061155694.1:144..6395"
                     /db_xref="GeneID:133065045"
ORIGIN      
        1 mlscqlvras nlpslkkdrr sdpvasltfr gvkkrtkvik nnvnpvwneg fewdlkgipl
       61 dqgsellvvv kdhetmgrnr flgeaniplr evlatpslsa sfnaplldtk kqptgaslvl
      121 qvsytplpga mptfppltpl epsptlpdmd mvadtggeed tedqgltgde aepfldqsga
      181 lgpgdpstlk kppshpppyh pggrrkkstp aprkllsdkp qdfqirvqvi egrqlpgvni
      241 kpvvkitaag qtkrtrihkg nspffnetlf fnvfdspael fnepifitvv dsrslrtdal
      301 igefrmdvgs iyreprhayl rkwlllsdpd dfsagargyl kaslcvlgpg deaplerkdp
      361 sedkediesn llrpigvalr gahfclkvfr aedlpqmdda vmdnvrqifg fdsnkknlvd
      421 pfvevsfagk mlcsrilekt anpqwnqsvt lpamfpsmce kmrirvidwd rlthndivat
      481 tylsmskisa sggeieeepa gvvkpppatd lddhlgflpt fgpcyinlyg spreftgfpd
      541 pyaelntgkg egvayrgrll lsletklveh seqkvealsa ddilrvekyl rrrkyslfaa
      601 fysatmlqdv ddaiqfevsi gnygnkfdtt clplasttqy sravfdgchy yylpwgnvkp
      661 vvvlssywed ishrveaqnq llriadqlea gleqvhlalk aqcsdedads lvvqlvdeli
      721 agcsqplgdv qempsathld qylyqlrtrh lsqiteaaqa lklghselpa aleqaedwll
      781 rlraladepq nslpdiviwm lqgdkrvayq rvpahevlfs rrgasycgkn cgklqtiflk
      841 ypmegvpgar mpvqirvrlw fglsvdekef nqfaegklsv faetyenqtk lalvgnwgtt
      901 gltypkfsdi tgriklpkds frpsagwawa gdwfvcpekt llhdtdaghl sfveevfenq
      961 trlpggqwiy msdnytdvng ekvlpkddie cplgwkwede ewstdlnrav deqgweysit
     1021 ippdrkprhw vpaekmyyth rrrrwvrlrr rdlsqmealk rhrqaeaege gweyaslfgw
     1081 kfhleyrktd afrrrrwrrr meplektgpa avfalegalg gvvddrseds vsvstlsfgv
     1141 nrptiscifd ygnryhlrcy myqardlpam dkdsfsdpya vvsflhqsqk tvvakntlnp
     1201 twdqtlifye ieifgepssi aeqppsivve lydhdtygvd efmgrcicqp slermprlaw
     1261 fpltrgsqpa gellasfeli qrekpaihhi pgfevqdttg ileesedtdl pypppqretn
     1321 iymvpqnikp vlqrtaieil awglrnmksy qlasvsspsl vvecggqsvq scviknlrkn
     1381 pnfdictlfm evmlpreely cppivvkvid nrqfgrrpvv gqctirsles flcdpyseds
     1441 pspqggpddv sllspgedvl ididdkepli piqeeefidw wskffasige sekcgsylek
     1501 dfdtlkvydt plenvkafeg lsdfcntfkl yrgktqeete dpsvigefkg lfkiyplped
     1561 paiplpprqf hqlasqgpqe clvrvyiira fglqpkdpng kcdpyikisi gkksvsdqdn
     1621 yipctlepvf gkmfeltctl plekdlkvtl ydydllskde kigetvidle nrllskfgar
     1681 cglpqtycis gpnqwrdqlr psqllhlfcq qrrvkapvyr tdrvvfqdke ytieeieagr
     1741 vpnphlgpve erlalhvlqq qglipehves rplysplqpd ieqgklqmwv dlfpkalgrp
     1801 gppfnitprr arrfflrcii wntkdvildd lsitgekmsd iyvkgwmvgf eehkqktdvh
     1861 yrslggegnf nwrfvfpfdy lpaeqvctvs kkdafwrldk teskiparvv fqiwdndkfs
     1921 fddflgslql dlnrmpkpak taekcsvdql edtlhperfv slfeqktvkg wwpcvadege
     1981 kkilagklem tleivteseh eerpaghgrd epnmnpkled prrpdtsflw ftspyktmkf
     2041 ilwrrfrcai ilffilfifl lflgifvysf pnyaamklvk pfs
//
LOCUS       XP_061011678            2082 aa            linear   MAM 02-DEC-2023
DEFINITION  dysferlin isoform X20 [Dama dama].
ACCESSION   XP_061011678
VERSION     XP_061011678.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155695.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2082
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2082
                     /product="dysferlin isoform X20"
                     /calculated_mol_wt=236970
     Region          20..135
                     /region_name="C2A_Ferlin"
                     /note="C2 domain first repeat in Ferlin; cd08373"
                     /db_xref="CDD:176019"
     Region          219..328
                     /region_name="C2B_Ferlin"
                     /note="C2 domain second repeat in Ferlin; cd04011"
                     /db_xref="CDD:175978"
     Region          326..376
                     /region_name="FerI"
                     /note="FerI (NUC094) domain; pfam08151"
                     /db_xref="CDD:462377"
     Region          382..556
                     /region_name="C2C_Ferlin"
                     /note="C2 domain third repeat in Ferlin; cd04018"
                     /db_xref="CDD:175985"
     Site            order(413,419,467,469,481,483)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175985"
     Region          697..761
                     /region_name="FerA"
                     /note="FerA (NUC095) domain; pfam08165"
                     /db_xref="CDD:462389"
     Region          788..861
                     /region_name="FerB"
                     /note="FerB (NUC096) domain; pfam08150"
                     /db_xref="CDD:462376"
     Region          877..935
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          948..1004
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          1154..1282
                     /region_name="C2D_Ferlin"
                     /note="C2 domain fourth repeat in Ferlin; cd04017"
                     /db_xref="CDD:175984"
     Site            order(1170,1176,1232,1234)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175984"
     Region          1581..1704
                     /region_name="C2E_Ferlin"
                     /note="C2 domain fifth repeat in Ferlin; cd04037"
                     /db_xref="CDD:176002"
     Site            order(1596,1602,1651,1653,1658)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176002"
     Region          1815..1946
                     /region_name="C2F_Ferlin"
                     /note="C2 domain sixth repeat in Ferlin; cd08374"
                     /db_xref="CDD:176020"
     Region          1959..>2046
                     /region_name="Ferlin_C"
                     /note="Ferlin C-terminus; pfam16165"
                     /db_xref="CDD:435183"
     CDS             1..2082
                     /gene="DYSF"
                     /coded_by="XM_061155695.1:537..6785"
                     /db_xref="GeneID:133065045"
ORIGIN      
        1 mlrvfilyae nvhtpdtdis daycsavfag vkkrtkvikn nvnpvwnegf ewdlkgipld
       61 qgsellvvvk dhetmgrnrf lgeaniplre vlatpslsas fnaplldtkk qptgaslvlq
      121 vsytplpgam ptfppltple psptlpdmdm vadtggeedt edqgltgdea epfldqsgal
      181 gpgdpstlkk ppshpppyhp ggrrkkstpa prkllsdkpq dfqirvqvie grqlpgvnik
      241 pvvkitaagq tkrtrihkgn spffnetlff nvfdspaelf nepifitvvd srslrtdali
      301 gefrmdvgsi yreprhaylr kwlllsdpdd fsagargylk aslcvlgpgd eaplerkdps
      361 edkediesnl lrpigvalrg ahfclkvfra edlpqmddav mdnvrqifgf dsnkknlvdp
      421 fvevsfagkm lcsrilekta npqwnqsvtl pamfpsmcek mrirvidwdr lthndivatt
      481 ylsmskisas ggeieeepag vvkpppatdl ddhlgflptf gpcyinlygs preftgfpdp
      541 yaelntgkge gvayrgrlll sletklvehs eqkvealsad dilrvekylr rrkyslfaaf
      601 ysatmlqdvd daiqfevsig nygnkfdttc lplasttqys ravfdgchyy ylpwgnvkpv
      661 vvlssywedi shrveaqnql lriadqleag leqvhlalka qcsdedadsl vvqlvdelia
      721 gcsqplgdvq empsathldq ylyqlrtrhl sqiteaaqal klghselpaa leqaedwllr
      781 lraladepqn slpdiviwml qgdkrvayqr vpahevlfsr rgasycgknc gklqtiflky
      841 pmegvpgarm pvqirvrlwf glsvdekefn qfaegklsvf aetyenqtkl alvgnwgttg
      901 ltypkfsdit griklpkdsf rpsagwawag dwfvcpektl lhdtdaghls fveevfenqt
      961 rlpggqwiym sdnytdvnge kvlpkddiec plgwkwedee wstdlnravd eqgweysiti
     1021 ppdrkprhwv paekmyythr rrrwvrlrrr dlsqmealkr hrqaeaegeg weyaslfgwk
     1081 fhleyrktda frrrrwrrrm eplektgpaa vfalegalgg vvddrsedsv svstlsfgvn
     1141 rptiscifdy gnryhlrcym yqardlpamd kdsfsdpyav vsflhqsqkt vvakntlnpt
     1201 wdqtlifyei eifgepssia eqppsivvel ydhdtygvde fmgrcicqps lermprlawf
     1261 pltrgsqpag ellasfeliq rekpaihhip gfevqdttgi leesedtdlp ypppqretni
     1321 ymvpqnikpv lqrtaieila wglrnmksyq lasvsspslv vecggqsvqs cviknlrknp
     1381 nfdictlfme vmlpreelyc ppivvkvidn rqfgrrpvvg qctirslesf lcdpysedsp
     1441 spqggpddvs llspgedvli diddkeplip iqeeefidww skffasiges ekcgsylekd
     1501 fdtlkvydtp lenvkafegl sdfcntfkly rgktqeeted psvigefkgl fkiyplpedp
     1561 aiplpprqfh qlasqgpqec lvrvyiiraf glqpkdpngk cdpyikisig kksvsdqdny
     1621 ipctlepvfg kmfeltctlp lekdlkvtly dydllskdek igetvidlen rllskfgarc
     1681 glpqtycisg pnqwrdqlrp sqllhlfcqq rrvkapvyrt drvvfqdkey tieeieagrv
     1741 pnphlgpvee rlalhvlqqq glipehvesr plysplqpdi eqgklqmwvd lfpkalgrpg
     1801 ppfnitprra rrfflrciiw ntkdvilddl sitgekmsdi yvkgwmvgfe ehkqktdvhy
     1861 rslggegnfn wrfvfpfdyl paeqvctvsk kdafwrldkt eskiparvvf qiwdndkfsf
     1921 ddflgslqld lnrmpkpakt aekcsvdqle dtlhperfvs lfeqktvkgw wpcvadegek
     1981 kilagklemt leivtesehe erpaghgrde pnmnpkledp rrpdtsflwf tspyktmkfi
     2041 lwrrfrcaii lffilfifll flgifvysfp nyaamklvkp fs
//
LOCUS       XP_061011679            2069 aa            linear   MAM 02-DEC-2023
DEFINITION  dysferlin isoform X21 [Dama dama].
ACCESSION   XP_061011679
VERSION     XP_061011679.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155696.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2069
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2069
                     /product="dysferlin isoform X21"
                     /calculated_mol_wt=235695
     Region          7..136
                     /region_name="C2A_Ferlin"
                     /note="C2 domain first repeat in Ferlin; cd08373"
                     /db_xref="CDD:176019"
     Region          220..329
                     /region_name="C2B_Ferlin"
                     /note="C2 domain second repeat in Ferlin; cd04011"
                     /db_xref="CDD:175978"
     Region          327..377
                     /region_name="FerI"
                     /note="FerI (NUC094) domain; pfam08151"
                     /db_xref="CDD:462377"
     Region          383..543
                     /region_name="C2C_Ferlin"
                     /note="C2 domain third repeat in Ferlin; cd04018"
                     /db_xref="CDD:175985"
     Site            order(414,420,468,470,482,484)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175985"
     Region          684..748
                     /region_name="FerA"
                     /note="FerA (NUC095) domain; pfam08165"
                     /db_xref="CDD:462389"
     Region          775..848
                     /region_name="FerB"
                     /note="FerB (NUC096) domain; pfam08150"
                     /db_xref="CDD:462376"
     Region          864..922
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          935..991
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          1141..1269
                     /region_name="C2D_Ferlin"
                     /note="C2 domain fourth repeat in Ferlin; cd04017"
                     /db_xref="CDD:175984"
     Site            order(1157,1163,1219,1221)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175984"
     Region          1568..1691
                     /region_name="C2E_Ferlin"
                     /note="C2 domain fifth repeat in Ferlin; cd04037"
                     /db_xref="CDD:176002"
     Site            order(1583,1589,1638,1640,1645)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176002"
     Region          1802..1933
                     /region_name="C2F_Ferlin"
                     /note="C2 domain sixth repeat in Ferlin; cd08374"
                     /db_xref="CDD:176020"
     Region          1946..>2033
                     /region_name="Ferlin_C"
                     /note="Ferlin C-terminus; pfam16165"
                     /db_xref="CDD:435183"
     CDS             1..2069
                     /gene="DYSF"
                     /coded_by="XM_061155696.1:143..6352"
                     /db_xref="GeneID:133065045"
ORIGIN      
        1 mlscqlvras nlpslkkdrr sdpvasltfr gvkkrtkvik nnvnpvwneg fewdlkgipl
       61 dqgsellvvv kdhetmgrnr flgeaniplr evlatpslsa sfnaplldtk kqptgaslvl
      121 qvsytplpga mptfppltpl epsptlpdmd mvadtggeed tedqgltgde aepfldqsga
      181 lgpgdpstlk kppshpppyh pggrrkkstp aprkllsdkp qdfqirvqvi egrqlpgvni
      241 kpvvkitaag qtkrtrihkg nspffnetlf fnvfdspael fnepifitvv dsrslrtdal
      301 igefrmdvgs iyreprhayl rkwlllsdpd dfsagargyl kaslcvlgpg deaplerkdp
      361 sedkediesn llrpigvalr gahfclkvfr aedlpqmdda vmdnvrqifg fdsnkknlvd
      421 pfvevsfagk mlcsrilekt anpqwnqsvt lpamfpsmce kmrirvidwd rlthndivat
      481 tylsmskisa sggeievddh lgflptfgpc yinlygspre ftgfpdpyae lntgkgegva
      541 yrgrlllsle tklvehseqk vealsaddil rvekylrrrk yslfaafysa tmlqdvddai
      601 qfevsignyg nkfdttclpl asttqysrav fdgchyyylp wgnvkpvvvl ssywedishr
      661 veaqnqllri adqleagleq vhlalkaqcs dedadslvvq lvdeliagcs qplgdvqemp
      721 sathldqyly qlrtrhlsqi teaaqalklg hselpaaleq aedwllrlra ladepqnslp
      781 diviwmlqgd krvayqrvpa hevlfsrrga sycgkncgkl qtiflkypme gvpgarmpvq
      841 irvrlwfgls vdekefnqfa egklsvfaet yenqtklalv gnwgttglty pkfsditgri
      901 klpkdsfrps agwawagdwf vcpektllhd tdaghlsfve evfenqtrlp ggqwiymsdn
      961 ytdvngekvl pkddiecplg wkwedeewst dlnravdeqg weysitippd rkprhwvpae
     1021 kmyythrrrr wvrlrrrdls qmealkrhrq aeaegegwey aslfgwkfhl eyrktdafrr
     1081 rrwrrrmepl ektgpaavfa legalggvvd drsedsvsvs tlsfgvnrpt iscifdygnr
     1141 yhlrcymyqa rdlpamdkds fsdpyavvsf lhqsqktvva kntlnptwdq tlifyeieif
     1201 gepssiaeqp psivvelydh dtygvdefmg rcicqpsler mprlawfplt rgsqpagell
     1261 asfeliqrek paihhipgfe vqdttgilee sedtdlpypp pqretniymv pqnikpvlqr
     1321 taieilawgl rnmksyqlas vsspslvvec ggqsvqscvi knlrknpnfd ictlfmevml
     1381 preelycppi vvkvidnrqf grrpvvgqct irslesflcd pysedspspq ggpddvslls
     1441 pgedvlidid dkeplipiqe eefidwwskf fasigesekc gsylekdfdt lkvydtplen
     1501 vkafeglsdf cntfklyrgk tqeetedpsv igefkglfki yplpedpaip lpprqfhqla
     1561 sqgpqeclvr vyiirafglq pkdpngkcdp yikisigkks vsdqdnyipc tlepvfgkmf
     1621 eltctlplek dlkvtlydyd llskdekige tvidlenrll skfgarcglp qtycisgpnq
     1681 wrdqlrpsql lhlfcqqrrv kapvyrtdrv vfqdkeytie eieagrvpnp hlgpveerla
     1741 lhvlqqqgli pehvesrply splqpdieqg klqmwvdlfp kalgrpgppf nitprrarrf
     1801 flrciiwntk dvilddlsit gekmsdiyvk gwmvgfeehk qktdvhyrsl ggegnfnwrf
     1861 vfpfdylpae qvctvskkda fwrldktesk iparvvfqiw dndkfsfddf lgslqldlnr
     1921 mpkpaktaek csvdqledtl hperfvslfe qktvkgwwpc vadegekkil agklemtlei
     1981 vteseheerp aghgrdepnm npkledprrp dtsflwftsp yktmkfilwr rfrcaiilff
     2041 ilfifllflg ifvysfpnya amklvkpfs
//
LOCUS       XP_061011680            2068 aa            linear   MAM 02-DEC-2023
DEFINITION  dysferlin isoform X22 [Dama dama].
ACCESSION   XP_061011680
VERSION     XP_061011680.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155697.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2068
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2068
                     /product="dysferlin isoform X22"
                     /calculated_mol_wt=235568
     Region          20..135
                     /region_name="C2A_Ferlin"
                     /note="C2 domain first repeat in Ferlin; cd08373"
                     /db_xref="CDD:176019"
     Region          219..328
                     /region_name="C2B_Ferlin"
                     /note="C2 domain second repeat in Ferlin; cd04011"
                     /db_xref="CDD:175978"
     Region          326..376
                     /region_name="FerI"
                     /note="FerI (NUC094) domain; pfam08151"
                     /db_xref="CDD:462377"
     Region          382..542
                     /region_name="C2C_Ferlin"
                     /note="C2 domain third repeat in Ferlin; cd04018"
                     /db_xref="CDD:175985"
     Site            order(413,419,467,469,481,483)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175985"
     Region          683..747
                     /region_name="FerA"
                     /note="FerA (NUC095) domain; pfam08165"
                     /db_xref="CDD:462389"
     Region          774..847
                     /region_name="FerB"
                     /note="FerB (NUC096) domain; pfam08150"
                     /db_xref="CDD:462376"
     Region          863..921
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          934..990
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          1140..1268
                     /region_name="C2D_Ferlin"
                     /note="C2 domain fourth repeat in Ferlin; cd04017"
                     /db_xref="CDD:175984"
     Site            order(1156,1162,1218,1220)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175984"
     Region          1567..1690
                     /region_name="C2E_Ferlin"
                     /note="C2 domain fifth repeat in Ferlin; cd04037"
                     /db_xref="CDD:176002"
     Site            order(1582,1588,1637,1639,1644)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176002"
     Region          1801..1932
                     /region_name="C2F_Ferlin"
                     /note="C2 domain sixth repeat in Ferlin; cd08374"
                     /db_xref="CDD:176020"
     Region          1945..>2032
                     /region_name="Ferlin_C"
                     /note="Ferlin C-terminus; pfam16165"
                     /db_xref="CDD:435183"
     CDS             1..2068
                     /gene="DYSF"
                     /coded_by="XM_061155697.1:536..6742"
                     /db_xref="GeneID:133065045"
ORIGIN      
        1 mlrvfilyae nvhtpdtdis daycsavfag vkkrtkvikn nvnpvwnegf ewdlkgipld
       61 qgsellvvvk dhetmgrnrf lgeaniplre vlatpslsas fnaplldtkk qptgaslvlq
      121 vsytplpgam ptfppltple psptlpdmdm vadtggeedt edqgltgdea epfldqsgal
      181 gpgdpstlkk ppshpppyhp ggrrkkstpa prkllsdkpq dfqirvqvie grqlpgvnik
      241 pvvkitaagq tkrtrihkgn spffnetlff nvfdspaelf nepifitvvd srslrtdali
      301 gefrmdvgsi yreprhaylr kwlllsdpdd fsagargylk aslcvlgpgd eaplerkdps
      361 edkediesnl lrpigvalrg ahfclkvfra edlpqmddav mdnvrqifgf dsnkknlvdp
      421 fvevsfagkm lcsrilekta npqwnqsvtl pamfpsmcek mrirvidwdr lthndivatt
      481 ylsmskisas ggeievddhl gflptfgpcy inlygspref tgfpdpyael ntgkgegvay
      541 rgrlllslet klvehseqkv ealsaddilr vekylrrrky slfaafysat mlqdvddaiq
      601 fevsignygn kfdttclpla sttqysravf dgchyyylpw gnvkpvvvls sywedishrv
      661 eaqnqllria dqleagleqv hlalkaqcsd edadslvvql vdeliagcsq plgdvqemps
      721 athldqylyq lrtrhlsqit eaaqalklgh selpaaleqa edwllrlral adepqnslpd
      781 iviwmlqgdk rvayqrvpah evlfsrrgas ycgkncgklq tiflkypmeg vpgarmpvqi
      841 rvrlwfglsv dekefnqfae gklsvfaety enqtklalvg nwgttgltyp kfsditgrik
      901 lpkdsfrpsa gwawagdwfv cpektllhdt daghlsfvee vfenqtrlpg gqwiymsdny
      961 tdvngekvlp kddiecplgw kwedeewstd lnravdeqgw eysitippdr kprhwvpaek
     1021 myythrrrrw vrlrrrdlsq mealkrhrqa eaegegweya slfgwkfhle yrktdafrrr
     1081 rwrrrmeple ktgpaavfal egalggvvdd rsedsvsvst lsfgvnrpti scifdygnry
     1141 hlrcymyqar dlpamdkdsf sdpyavvsfl hqsqktvvak ntlnptwdqt lifyeieifg
     1201 epssiaeqpp sivvelydhd tygvdefmgr cicqpslerm prlawfpltr gsqpagella
     1261 sfeliqrekp aihhipgfev qdttgilees edtdlpyppp qretniymvp qnikpvlqrt
     1321 aieilawglr nmksyqlasv sspslvvecg gqsvqscvik nlrknpnfdi ctlfmevmlp
     1381 reelycppiv vkvidnrqfg rrpvvgqcti rslesflcdp ysedspspqg gpddvsllsp
     1441 gedvlididd keplipiqee efidwwskff asigesekcg sylekdfdtl kvydtplenv
     1501 kafeglsdfc ntfklyrgkt qeetedpsvi gefkglfkiy plpedpaipl pprqfhqlas
     1561 qgpqeclvrv yiirafglqp kdpngkcdpy ikisigkksv sdqdnyipct lepvfgkmfe
     1621 ltctlplekd lkvtlydydl lskdekiget vidlenrlls kfgarcglpq tycisgpnqw
     1681 rdqlrpsqll hlfcqqrrvk apvyrtdrvv fqdkeytiee ieagrvpnph lgpveerlal
     1741 hvlqqqglip ehvesrplys plqpdieqgk lqmwvdlfpk algrpgppfn itprrarrff
     1801 lrciiwntkd vilddlsitg ekmsdiyvkg wmvgfeehkq ktdvhyrslg gegnfnwrfv
     1861 fpfdylpaeq vctvskkdaf wrldkteski parvvfqiwd ndkfsfddfl gslqldlnrm
     1921 pkpaktaekc svdqledtlh perfvslfeq ktvkgwwpcv adegekkila gklemtleiv
     1981 teseheerpa ghgrdepnmn pkledprrpd tsflwftspy ktmkfilwrr frcaiilffi
     2041 lfifllflgi fvysfpnyaa mklvkpfs
//
LOCUS       XP_061011681             512 aa            linear   MAM 02-DEC-2023
DEFINITION  cytochrome P450 26B1 [Dama dama].
ACCESSION   XP_061011681
VERSION     XP_061011681.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155698.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..512
                     /product="cytochrome P450 26B1"
                     /calculated_mol_wt=57283
     Region          60..490
                     /region_name="CYP26B1"
                     /note="cytochrome P450 family 26, subfamily B, polypeptide
                     1; cd20637"
                     /db_xref="CDD:410730"
     Site            order(65,95,117,121,131,222,292,295..296,300,368..370,395,
                     478)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410730"
     Site            order(117,130..131,138,142,149,197,292..293,296..297,
                     300..301,362,367..368,373,394,396,433..435,439,441..443,
                     446..447,451)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410730"
     CDS             1..512
                     /gene="LOC133065049"
                     /coded_by="XM_061155698.1:682..2220"
                     /db_xref="GeneID:133065049"
ORIGIN      
        1 mlfeglelvs alatlaaclv svtlllavsq qlwqlrwaat rdkscklpip kgsmgfplig
       61 etghwllqgs gfqssrreky gnvfkthllg rplirvtgae nvrkilmgeh hlvstewprs
      121 trmllgpntv snsigdihrn krkvfskifs healesylpk iqlviqdtlr awsshpeain
      181 vyqeaqkltf rmairvllgf sipeedlghl fevyqqfven vfslpvdlpf sgyrrgiqar
      241 qtlqkgleka ireklqctqg kdysdaldil iesskehgke mtmqelkdgt lelifaayat
      301 tasastslim qllkhpavle klreelrakg llhsggcpce gtlrldtlsg lhyldcvike
      361 vmrlftpvsg gyrtvlqtfe ldgfqipkgw svmysirdth dtapvfkdvn vfdpdrfgqa
      421 rsedkdgrfh ylpfgggvrt clgkhlaklf lkvlavelas tsrfelatrt fpritlvpvl
      481 hpvdglsvkf fgldsnqnki lpeteamlsa tv
//
LOCUS       XP_061011682             840 aa            linear   MAM 02-DEC-2023
DEFINITION  exocyst complex component 6B isoform X1 [Dama dama].
ACCESSION   XP_061011682
VERSION     XP_061011682.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155699.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..840
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..840
                     /product="exocyst complex component 6B isoform X1"
                     /calculated_mol_wt=97236
     Region          494..800
                     /region_name="Sec15"
                     /note="Exocyst complex subunit Sec15-like; pfam04091"
                     /db_xref="CDD:461169"
     CDS             1..840
                     /gene="EXOC6B"
                     /coded_by="XM_061155699.1:128..2650"
                     /db_xref="GeneID:133065050"
ORIGIN      
        1 mervkmaeae sletaaeher ilreiestdt acigptlrsv ydgeehgrfm ekletrirnh
       61 dreiekmcnf hyqgfvdsit ellkvrgeaq klknqvtdtn rklqhegkel viameelkqc
      121 rlqqrnisat vdklmlclpv lemysklrdq mktkrhypal ktlehlehty lpqvshyrfc
      181 kvmvdnipkl reeikdvsms dlkdflesir khsdkigeta mkqhpvvevr vqsqsckprp
      241 lsicmcsfsp leaqqqrnld niilqqprig skrkskkeay tifdteiest spkseqdsgi
      301 ldvedeedde evpgaqdlvd fspvyrclhi ysvlgaretf enyyrkqrrk qarlvlqpps
      361 nmhetldgyr kyfnqivgff vvedhtlhtt qglvnrayid elwemalskt vaalrthssy
      421 csdpnlvldl knlivlfadt lqvygfpvnq lfdmlleird qysetllkkw sgifrsilds
      481 dnyspipvts edmykkvigq fpfqdtelek qpfpkkfpfs efvpkvynqi kefiyaclkf
      541 sedlhlsste vddmirkstn llltrtlsns lqnvikrkni gltelvqiii ntthleksck
      601 yleefitnit nvlpetvhtt klygtttfkd arhaaeeeiy tnlnqkidqf lqladydwmt
      661 gdlgskasdy lvdliaflrs tfavfthlpg kvaqtacmsa ckhlatslmq llleaevrql
      721 tlgalqqfnl dvieceqfar sgpvpgfqed tlqlafidlr qlldlfiqwd wstyladygq
      781 ptckylrvnp vtaltllekm kdtsrknnmf aqfrknerdk qklidtvakq lrglisshhs
//
LOCUS       XP_061011683             817 aa            linear   MAM 02-DEC-2023
DEFINITION  exocyst complex component 6B isoform X2 [Dama dama].
ACCESSION   XP_061011683
VERSION     XP_061011683.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155700.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..817
                     /product="exocyst complex component 6B isoform X2"
                     /calculated_mol_wt=94385
     Region          494..762
                     /region_name="Sec15"
                     /note="Exocyst complex subunit Sec15-like; pfam04091"
                     /db_xref="CDD:461169"
     CDS             1..817
                     /gene="EXOC6B"
                     /coded_by="XM_061155700.1:128..2581"
                     /db_xref="GeneID:133065050"
ORIGIN      
        1 mervkmaeae sletaaeher ilreiestdt acigptlrsv ydgeehgrfm ekletrirnh
       61 dreiekmcnf hyqgfvdsit ellkvrgeaq klknqvtdtn rklqhegkel viameelkqc
      121 rlqqrnisat vdklmlclpv lemysklrdq mktkrhypal ktlehlehty lpqvshyrfc
      181 kvmvdnipkl reeikdvsms dlkdflesir khsdkigeta mkqhpvvevr vqsqsckprp
      241 lsicmcsfsp leaqqqrnld niilqqprig skrkskkeay tifdteiest spkseqdsgi
      301 ldvedeedde evpgaqdlvd fspvyrclhi ysvlgaretf enyyrkqrrk qarlvlqpps
      361 nmhetldgyr kyfnqivgff vvedhtlhtt qglvnrayid elwemalskt vaalrthssy
      421 csdpnlvldl knlivlfadt lqvygfpvnq lfdmlleird qysetllkkw sgifrsilds
      481 dnyspipvts edmykkvigq fpfqdtelek qpfpkkfpfs efvpkvynqi kefiyaclkf
      541 sedlhlsste vddmirkstn llltrtlsns lqnvikrkni gltelvqiii ntthleksck
      601 yleefitnit nvlpetvhtt klygtttfkd arhaaeeeiy tnlnqkidqf lqladydwmt
      661 gdlgskasdy lvdliaflrs tfavfthlpg kvaqtacmsa ckhlatslmq llleaevrql
      721 tlgalqqfnl dvieceqfar sgpvpgfqed tlqlafidlr qlafadtaek itrqtdakev
      781 hrcrdgllre plfadnegsn klmkmkyftf wivglvc
//
LOCUS       XP_061011684             811 aa            linear   MAM 02-DEC-2023
DEFINITION  exocyst complex component 6B isoform X3 [Dama dama].
ACCESSION   XP_061011684
VERSION     XP_061011684.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155701.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..811
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..811
                     /product="exocyst complex component 6B isoform X3"
                     /calculated_mol_wt=93996
     Region          465..771
                     /region_name="Sec15"
                     /note="Exocyst complex subunit Sec15-like; pfam04091"
                     /db_xref="CDD:461169"
     CDS             1..811
                     /gene="EXOC6B"
                     /coded_by="XM_061155701.1:128..2563"
                     /db_xref="GeneID:133065050"
ORIGIN      
        1 mervkmaeae sletaaeher ilreiestdt acigptlrsv ydgeehgrfm ekletrirnh
       61 dreiekmcnf hyqgfvdsit ellkvrgeaq klknqvtdtn rklqhegkel viameelkqc
      121 rlqqrnisat vdklmlclpv lemysklrdq mktkrhypal ktlehlehty lpqvshyrfc
      181 kvmvdnipkl reeikdvsms dlkdflesir khsdkigeta mkqaqqqrnl dniilqqpri
      241 gskrkskkea ytifdteies tspkseqdsg ildvedeedd eevpgaqdlv dfspvyrclh
      301 iysvlgaret fenyyrkqrr kqarlvlqpp snmhetldgy rkyfnqivgf fvvedhtlht
      361 tqglvnrayi delwemalsk tvaalrthss ycsdpnlvld lknlivlfad tlqvygfpvn
      421 qlfdmlleir dqysetllkk wsgifrsild sdnyspipvt sedmykkvig qfpfqdtele
      481 kqpfpkkfpf sefvpkvynq ikefiyaclk fsedlhlsst evddmirkst nllltrtlsn
      541 slqnvikrkn igltelvqii intthleksc kyleefitni tnvlpetvht tklygtttfk
      601 darhaaeeei ytnlnqkidq flqladydwm tgdlgskasd ylvdliaflr stfavfthlp
      661 gkvaqtacms ackhlatslm qllleaevrq ltlgalqqfn ldvieceqfa rsgpvpgfqe
      721 dtlqlafidl rqlldlfiqw dwstyladyg qptckylrvn pvtaltllek mkdtsrknnm
      781 faqfrknerd kqklidtvak qlrglisshh s
//
LOCUS       XP_061011685             795 aa            linear   MAM 02-DEC-2023
DEFINITION  exocyst complex component 6B isoform X4 [Dama dama].
ACCESSION   XP_061011685
VERSION     XP_061011685.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155702.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..795
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..795
                     /product="exocyst complex component 6B isoform X4"
                     /calculated_mol_wt=92057
     Region          494..755
                     /region_name="Sec15"
                     /note="Exocyst complex subunit Sec15-like; pfam04091"
                     /db_xref="CDD:461169"
     CDS             1..795
                     /gene="EXOC6B"
                     /coded_by="XM_061155702.1:128..2515"
                     /db_xref="GeneID:133065050"
ORIGIN      
        1 mervkmaeae sletaaeher ilreiestdt acigptlrsv ydgeehgrfm ekletrirnh
       61 dreiekmcnf hyqgfvdsit ellkvrgeaq klknqvtdtn rklqhegkel viameelkqc
      121 rlqqrnisat vdklmlclpv lemysklrdq mktkrhypal ktlehlehty lpqvshyrfc
      181 kvmvdnipkl reeikdvsms dlkdflesir khsdkigeta mkqhpvvevr vqsqsckprp
      241 lsicmcsfsp leaqqqrnld niilqqprig skrkskkeay tifdteiest spkseqdsgi
      301 ldvedeedde evpgaqdlvd fspvyrclhi ysvlgaretf enyyrkqrrk qarlvlqpps
      361 nmhetldgyr kyfnqivgff vvedhtlhtt qglvnrayid elwemalskt vaalrthssy
      421 csdpnlvldl knlivlfadt lqvygfpvnq lfdmlleird qysetllkkw sgifrsilds
      481 dnyspipvts edmykkvigq fpfqdtelek qpfpkkfpfs efvpkvynqi kefiyaclkf
      541 sedlhlsste vddmirkstn llltrtlsns lqnvikrkni gltedarhaa eeeiytnlnq
      601 kidqflqlad ydwmtgdlgs kasdylvdli aflrstfavf thlpgkvaqt acmsackhla
      661 tslmqlllea evrqltlgal qqfnldviec eqfarsgpvp gfqedtlqla fidlrqlldl
      721 fiqwdwstyl adygqptcky lrvnpvtalt llekmkdtsr knnmfaqfrk nerdkqklid
      781 tvakqlrgli sshhs
//
LOCUS       XP_061011686             791 aa            linear   MAM 02-DEC-2023
DEFINITION  exocyst complex component 6B isoform X5 [Dama dama].
ACCESSION   XP_061011686
VERSION     XP_061011686.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155703.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..791
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..791
                     /product="exocyst complex component 6B isoform X5"
                     /calculated_mol_wt=91689
     Region          445..751
                     /region_name="Sec15"
                     /note="Exocyst complex subunit Sec15-like; pfam04091"
                     /db_xref="CDD:461169"
     CDS             1..791
                     /gene="EXOC6B"
                     /coded_by="XM_061155703.1:117..2492"
                     /db_xref="GeneID:133065050"
ORIGIN      
        1 mekletrirn hdreiekmcn fhyqgfvdsi tellkvrgea qklknqvtdt nrklqhegke
       61 lviameelkq crlqqrnisa tvdklmlclp vlemysklrd qmktkrhypa lktlehleht
      121 ylpqvshyrf ckvmvdnipk lreeikdvsm sdlkdflesi rkhsdkiget amkqhpvvev
      181 rvqsqsckpr plsicmcsfs pleaqqqrnl dniilqqpri gskrkskkea ytifdteies
      241 tspkseqdsg ildvedeedd eevpgaqdlv dfspvyrclh iysvlgaret fenyyrkqrr
      301 kqarlvlqpp snmhetldgy rkyfnqivgf fvvedhtlht tqglvnrayi delwemalsk
      361 tvaalrthss ycsdpnlvld lknlivlfad tlqvygfpvn qlfdmlleir dqysetllkk
      421 wsgifrsild sdnyspipvt sedmykkvig qfpfqdtele kqpfpkkfpf sefvpkvynq
      481 ikefiyaclk fsedlhlsst evddmirkst nllltrtlsn slqnvikrkn igltelvqii
      541 intthleksc kyleefitni tnvlpetvht tklygtttfk darhaaeeei ytnlnqkidq
      601 flqladydwm tgdlgskasd ylvdliaflr stfavfthlp gkvaqtacms ackhlatslm
      661 qllleaevrq ltlgalqqfn ldvieceqfa rsgpvpgfqe dtlqlafidl rqlldlfiqw
      721 dwstyladyg qptckylrvn pvtaltllek mkdtsrknnm faqfrknerd kqklidtvak
      781 qlrglisshh s
//
LOCUS       XP_061011687             775 aa            linear   MAM 02-DEC-2023
DEFINITION  exocyst complex component 6B isoform X6 [Dama dama].
ACCESSION   XP_061011687
VERSION     XP_061011687.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155704.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..775
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..775
                     /product="exocyst complex component 6B isoform X6"
                     /calculated_mol_wt=89413
     Region          494..761
                     /region_name="Sec15"
                     /note="Exocyst complex subunit Sec15-like; pfam04091"
                     /db_xref="CDD:461169"
     CDS             1..775
                     /gene="EXOC6B"
                     /coded_by="XM_061155704.1:128..2455"
                     /db_xref="GeneID:133065050"
ORIGIN      
        1 mervkmaeae sletaaeher ilreiestdt acigptlrsv ydgeehgrfm ekletrirnh
       61 dreiekmcnf hyqgfvdsit ellkvrgeaq klknqvtdtn rklqhegkel viameelkqc
      121 rlqqrnisat vdklmlclpv lemysklrdq mktkrhypal ktlehlehty lpqvshyrfc
      181 kvmvdnipkl reeikdvsms dlkdflesir khsdkigeta mkqhpvvevr vqsqsckprp
      241 lsicmcsfsp leaqqqrnld niilqqprig skrkskkeay tifdteiest spkseqdsgi
      301 ldvedeedde evpgaqdlvd fspvyrclhi ysvlgaretf enyyrkqrrk qarlvlqpps
      361 nmhetldgyr kyfnqivgff vvedhtlhtt qglvnrayid elwemalskt vaalrthssy
      421 csdpnlvldl knlivlfadt lqvygfpvnq lfdmlleird qysetllkkw sgifrsilds
      481 dnyspipvts edmykkvigq fpfqdtelek qpfpkkfpfs efvpkvynqi kefiyaclkf
      541 sedlhlsste vddmirkstn llltrtlsns lqnvikrkni gltelvqiii ntthleksck
      601 yleefitnit nvlpetvhtt klygtttfkd arhaaeeeiy tnlnqkidqf lqladydwmt
      661 gdlgskasdy lvdliaflrs tfavfthlpg kvaqtacmsa ckhlatslmq llleaevrql
      721 tlgalqqfnl dvieceqfar sgpvpgfqed tlqlafidlr qddddgddtv srgkl
//
LOCUS       XP_061011688             768 aa            linear   MAM 02-DEC-2023
DEFINITION  exocyst complex component 6B isoform X7 [Dama dama].
ACCESSION   XP_061011688
VERSION     XP_061011688.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155705.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..768
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..768
                     /product="exocyst complex component 6B isoform X7"
                     /calculated_mol_wt=88668
     Region          494..762
                     /region_name="Sec15"
                     /note="Exocyst complex subunit Sec15-like; pfam04091"
                     /db_xref="CDD:461169"
     CDS             1..768
                     /gene="EXOC6B"
                     /coded_by="XM_061155705.1:128..2434"
                     /db_xref="GeneID:133065050"
ORIGIN      
        1 mervkmaeae sletaaeher ilreiestdt acigptlrsv ydgeehgrfm ekletrirnh
       61 dreiekmcnf hyqgfvdsit ellkvrgeaq klknqvtdtn rklqhegkel viameelkqc
      121 rlqqrnisat vdklmlclpv lemysklrdq mktkrhypal ktlehlehty lpqvshyrfc
      181 kvmvdnipkl reeikdvsms dlkdflesir khsdkigeta mkqhpvvevr vqsqsckprp
      241 lsicmcsfsp leaqqqrnld niilqqprig skrkskkeay tifdteiest spkseqdsgi
      301 ldvedeedde evpgaqdlvd fspvyrclhi ysvlgaretf enyyrkqrrk qarlvlqpps
      361 nmhetldgyr kyfnqivgff vvedhtlhtt qglvnrayid elwemalskt vaalrthssy
      421 csdpnlvldl knlivlfadt lqvygfpvnq lfdmlleird qysetllkkw sgifrsilds
      481 dnyspipvts edmykkvigq fpfqdtelek qpfpkkfpfs efvpkvynqi kefiyaclkf
      541 sedlhlsste vddmirkstn llltrtlsns lqnvikrkni gltelvqiii ntthleksck
      601 yleefitnit nvlpetvhtt klygtttfkd arhaaeeeiy tnlnqkidqf lqladydwmt
      661 gdlgskasdy lvdliaflrs tfavfthlpg kvaqtacmsa ckhlatslmq llleaevrql
      721 tlgalqqfnl dvieceqfar sgpvpgfqed tlqlafidlr qchmavtt
//
LOCUS       XP_061011689             766 aa            linear   MAM 02-DEC-2023
DEFINITION  exocyst complex component 6B isoform X8 [Dama dama].
ACCESSION   XP_061011689
VERSION     XP_061011689.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155706.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..766
                     /product="exocyst complex component 6B isoform X8"
                     /calculated_mol_wt=88817
     Region          465..726
                     /region_name="Sec15"
                     /note="Exocyst complex subunit Sec15-like; pfam04091"
                     /db_xref="CDD:461169"
     CDS             1..766
                     /gene="EXOC6B"
                     /coded_by="XM_061155706.1:128..2428"
                     /db_xref="GeneID:133065050"
ORIGIN      
        1 mervkmaeae sletaaeher ilreiestdt acigptlrsv ydgeehgrfm ekletrirnh
       61 dreiekmcnf hyqgfvdsit ellkvrgeaq klknqvtdtn rklqhegkel viameelkqc
      121 rlqqrnisat vdklmlclpv lemysklrdq mktkrhypal ktlehlehty lpqvshyrfc
      181 kvmvdnipkl reeikdvsms dlkdflesir khsdkigeta mkqaqqqrnl dniilqqpri
      241 gskrkskkea ytifdteies tspkseqdsg ildvedeedd eevpgaqdlv dfspvyrclh
      301 iysvlgaret fenyyrkqrr kqarlvlqpp snmhetldgy rkyfnqivgf fvvedhtlht
      361 tqglvnrayi delwemalsk tvaalrthss ycsdpnlvld lknlivlfad tlqvygfpvn
      421 qlfdmlleir dqysetllkk wsgifrsild sdnyspipvt sedmykkvig qfpfqdtele
      481 kqpfpkkfpf sefvpkvynq ikefiyaclk fsedlhlsst evddmirkst nllltrtlsn
      541 slqnvikrkn igltedarha aeeeiytnln qkidqflqla dydwmtgdlg skasdylvdl
      601 iaflrstfav fthlpgkvaq tacmsackhl atslmqllle aevrqltlga lqqfnldvie
      661 ceqfarsgpv pgfqedtlql afidlrqlld lfiqwdwsty ladygqptck ylrvnpvtal
      721 tllekmkdts rknnmfaqfr knerdkqkli dtvakqlrgl isshhs
//
LOCUS       XP_061011690             267 aa            linear   MAM 02-DEC-2023
DEFINITION  sepiapterin reductase [Dama dama].
ACCESSION   XP_061011690
VERSION     XP_061011690.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155707.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..267
                     /product="sepiapterin reductase"
                     /calculated_mol_wt=28689
     Region          14..266
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(20..25,47..49,74..76,106..108,132,161..163,176,180,
                     204..207,209..212)
                     /site_type="other"
                     /note="NADP binding site [chemical binding]"
                     /db_xref="CDD:187625"
     Site            order(83,123..124,126..127,130..131,134..135,138..139,142,
                     165..167,174..175,177..178,182,185..186,189..190,192..194)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:187625"
     Site            order(133,163,176,180)
                     /site_type="active"
                     /db_xref="CDD:187625"
     CDS             1..267
                     /gene="SPR"
                     /coded_by="XM_061155707.1:51..854"
                     /db_xref="GeneID:133065052"
ORIGIN      
        1 meggigkagg lgrticvltg asrgfgrtla qllapllspg svlvlsarnd ealqqleael
       61 gaerlglriv rvpadlgaet glqqllgalc dlprpeglqr vllinnaatl gdvskrwvdl
      121 adstevnnyw tlnltsmlcl tssilkafpd spglsrtvvn issicalqpf kgwalycagk
      181 aarnmmfqvl aaeepsvrvl syapgpldtd mqqlaretsv dpdlrkrlqe lkrkgelvdc
      241 kisaqkllsl lqndkfksga hvdfyde
//
LOCUS       XP_061011691             340 aa            linear   MAM 02-DEC-2023
DEFINITION  sideroflexin-5 isoform X1 [Dama dama].
ACCESSION   XP_061011691
VERSION     XP_061011691.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155708.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..340
                     /product="sideroflexin-5 isoform X1"
                     /calculated_mol_wt=36993
     Region          26..340
                     /region_name="SFXNs"
                     /note="Sideroflexins; pfam03820"
                     /db_xref="CDD:461063"
     CDS             1..340
                     /gene="SFXN5"
                     /coded_by="XM_061155708.1:36..1058"
                     /db_xref="GeneID:133065053"
ORIGIN      
        1 madtattasa aaasaanast dappfqlgkp rfqqtsffgr frhfldiidp rtlfvterrl
       61 reavqlledy krgtlrpgvt neqlwsaqki kqailhpdtn ekifmpfrms gyipfgtpiv
      121 vglllpnqtl astvfwqwln qshnacvnya nrnatkpspa skfiqgylga visavsiavg
      181 lnvlvqkank ftpatrllvq rfvpfpavas anicnvvlmr ygeleegidv ldgdgnlvgs
      241 skiaarhall etaltrvvlp mpilvlppiv msmlektall qarprlllpv qslvclaafg
      301 lalplaislf pqmseietsq lepeiaqats srtvvynkgl
//
LOCUS       XP_061011692             281 aa            linear   MAM 02-DEC-2023
DEFINITION  sideroflexin-5 isoform X2 [Dama dama].
ACCESSION   XP_061011692
VERSION     XP_061011692.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155709.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..281
                     /product="sideroflexin-5 isoform X2"
                     /calculated_mol_wt=30680
     Region          26..281
                     /region_name="SFXNs"
                     /note="Sideroflexins; pfam03820"
                     /db_xref="CDD:461063"
     CDS             1..281
                     /gene="SFXN5"
                     /coded_by="XM_061155709.1:36..881"
                     /db_xref="GeneID:133065053"
ORIGIN      
        1 madtattasa aaasaanast dappfqlgkp rfqqtsffgr frhfldiidp rtlfvterrl
       61 reavqlledy krgtlrpgvt neqlwsaqki kqailhpdtn ekifmpfrms gyipfgtpiv
      121 glnvlvqkan kftpatrllv qrfvpfpava sanicnvvlm rygeleegid vldgdgnlvg
      181 sskiaarhal letaltrvvl pmpilvlppi vmsmlektal lqarprlllp vqslvclaaf
      241 glalplaisl fpqmseiets qlepeiaqat ssrtvvynkg l
//
LOCUS       XP_061011693            1230 aa            linear   MAM 02-DEC-2023
DEFINITION  rab11 family-interacting protein 5 isoform X1 [Dama dama].
ACCESSION   XP_061011693
VERSION     XP_061011693.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155710.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1230
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1230
                     /product="rab11 family-interacting protein 5 isoform X1"
                     /calculated_mol_wt=129199
     Region          21..167
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     Region          346..>553
                     /region_name="dnaA"
                     /note="chromosomal replication initiator protein DnaA;
                     cl42516"
                     /db_xref="CDD:455861"
     Region          841..>1126
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          1178..1225
                     /region_name="RBD-FIP"
                     /note="FIP domain; pfam09457"
                     /db_xref="CDD:462805"
     CDS             1..1230
                     /gene="RAB11FIP5"
                     /coded_by="XM_061155710.1:131..3823"
                     /db_xref="GeneID:133065054"
ORIGIN      
        1 malvrgaepa agpsrwlpth vqvtvlrarg lrgkssgags tsdaytviqv grekystsvv
       61 ektpgcpewr eecsfelppg aldgllraqe adagpapwaa gsaaacqlvl ttmhrsligv
      121 dkflgqatva ldevfgagra qhtqwyklhs kagkkekerg eiqvtiqftr nnlsasmfdl
      181 svkdkprspf skikdkmkgk kkydlesasa ilpssaledp elgslgkmgk akgfflrskl
      241 rkssltqsnt slgsdstlss asgslayqgp gaelltrsps rsswlssegg rdsaqspkll
      301 thkrtysdea sqmraappra lldlqghldg asrsslcvng shiyneeppa pprhrssisg
      361 pfppssslha gssrpseegp rsaddswarg srrpssseaa pgqeelssqa rvlavgarrs
      421 geeegarpse grpvqvatpm vasseaavek egarkeerkp rmglfhhhhq glsrsemgrr
      481 gslgekggpt lgasphhsst geekaksswf glreakepsq kpsasranpt plaspgkaqp
      541 ewddtfnifa asrlrpears eilappgvgl eaiglqdpgp gamtmkaaep qgdpgggerg
      601 gssmwpeprv pldlgldcps tsvadpgplg segaclppas aqlhpgasas gadrelpapg
      661 geagqspads atslfsspev isvwerlpgp dgapeahqdk etcrggsqls heldtvddsw
      721 pwdvvtvspa vettspvlqg gssdelpppp qmqprspepv spqrsgglpp lepdsepkpk
      781 weldqglqpq tpppkpprlf tpsdsqekea aaaeeekkae aveeeeeeee eaveglsrrg
      841 setgeedvvp sapiagpqaa eqgeeaqkpe lesdshssga aqggpgpedl aedasppvvs
      901 gpclsvpasc pqgpapkphy seslalqsqq mwatpkredp eaqsqdpgge gpglpsgsrr
      961 qadlrlseed alnpftsqgs qdppslpsts ppgsressir sgpeelptpp epalpppplp
     1021 pgashrhggp sppcsplpga wtltsslphg epasptgssp tplgedhaag tpasplallp
     1081 letrpaeetr paeepqpsas phpvkplsta paegspdrkq srsslstals sgleklktvt
     1141 sgsiqpvapa pqvgqtadak rlkdsgvldq saryyhlthd eliglllqre relsqrdehv
     1201 qelesyidrl lvrimesspt llqippappk
//
LOCUS       XP_061011694             653 aa            linear   MAM 02-DEC-2023
DEFINITION  rab11 family-interacting protein 5 isoform X2 [Dama dama].
ACCESSION   XP_061011694
VERSION     XP_061011694.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155711.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..653
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..653
                     /product="rab11 family-interacting protein 5 isoform X2"
                     /calculated_mol_wt=69903
     Region          21..167
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     Region          348..>551
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          601..648
                     /region_name="RBD-FIP"
                     /note="FIP domain; pfam09457"
                     /db_xref="CDD:462805"
     CDS             1..653
                     /gene="RAB11FIP5"
                     /coded_by="XM_061155711.1:131..2092"
                     /db_xref="GeneID:133065054"
ORIGIN      
        1 malvrgaepa agpsrwlpth vqvtvlrarg lrgkssgags tsdaytviqv grekystsvv
       61 ektpgcpewr eecsfelppg aldgllraqe adagpapwaa gsaaacqlvl ttmhrsligv
      121 dkflgqatva ldevfgagra qhtqwyklhs kagkkekerg eiqvtiqftr nnlsasmfdl
      181 svkdkprspf skikdkmkgk kkydlesasa ilpssaledp elgslgkmgk akgfflrskl
      241 rkssltqsnt slgsdstlss asgslayqgp gaelltrsps rsswlssegg rdsaqspkll
      301 thkrtysdea sqmraappra lldlqghldg asrsslcvng shiyneeppa pprhrssisg
      361 pfppssslha gssrpseegp rsaddswarg srrpssseaa pgqeelssqa rvlavgarrs
      421 geeegarpse grpvqvatpm vasseaavek egarkeerkp rmglfhhhhq glsrsemgrr
      481 gslgekggpt lgasphhsst geekaksswf glreakepsq kpsphpvkpl stapaegspd
      541 rkqsrsslst alssgleklk tvtsgsiqpv apapqvgqta dakrlkdsgv ldqsaryyhl
      601 thdeliglll qrerelsqrd ehvqelesyi drllvrimes sptllqippa ppk
//
LOCUS       XP_061011695            1309 aa            linear   MAM 02-DEC-2023
DEFINITION  rab11 family-interacting protein 5 isoform X3 [Dama dama].
ACCESSION   XP_061011695
VERSION     XP_061011695.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155712.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1309
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1309
                     /product="rab11 family-interacting protein 5 isoform X3"
                     /calculated_mol_wt=136783
     Region          21..167
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     Region          852..>1205
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          1257..1304
                     /region_name="RBD-FIP"
                     /note="FIP domain; pfam09457"
                     /db_xref="CDD:462805"
     CDS             1..1309
                     /gene="RAB11FIP5"
                     /coded_by="XM_061155712.1:131..4060"
                     /db_xref="GeneID:133065054"
ORIGIN      
        1 malvrgaepa agpsrwlpth vqvtvlrarg lrgkssgags tsdaytviqv grekystsvv
       61 ektpgcpewr eecsfelppg aldgllraqe adagpapwaa gsaaacqlvl ttmhrsligv
      121 dkflgqatva ldevfgagra qhtqwyklhs kagkkekerg eiqvtiqftr nnlsasmfdl
      181 svkdkprspf skikdkmkgk kkydlesasa ilpssaledp elgslgkmgk akgfflrskl
      241 rkssltqsnt slgsdstlss asgslayqgp gaelltrsps rsswlssegg rdsaqspkll
      301 thkrtysdea sqmraappra lldlqghldg asrsslcvng shiyneeppa pprhrssisg
      361 pfppssslha gssrpseegp rsaddswarg srrpssseaa pgqeelssqa rvlavgarrs
      421 geeegarpse grpvqvatpm vasseaavek egarkeerkp rmglfhhhhq glsrsemgrr
      481 gslgekggpt lgasphhsst geekaksswf glreakepsq kpsldvspqv esdlaalphh
      541 hpcspcapap ptapllstnl cavaspaaaa aaaaaapett psglsgltnp fltslqsnpf
      601 feeliadial nspspapslp sasranptpl aspgkaqpew ddtfnifaas rlrpearsei
      661 lappgvglea iglqdpgpga mtmkaaepqg dpgggerggs smwpeprvpl dlgldcpsts
      721 vadpgplgse gaclppasaq lhpgasasga drelpapgge agqspadsat slfsspevis
      781 vwerlpgpdg apeahqdket crggsqlshe ldtvddswpw dvvtvspave ttspvlqggs
      841 sdelppppqm qprspepvsp qrsgglpple pdsepkpkwe ldqglqpqtp ppkpprlftp
      901 sdsqekeeee aveglsrrgs etgeedvvps apiagpqaae qgeeaqkpel esdshssgaa
      961 qggpgpedla edasppvvsg pclsvpascp qgpapkphys eslalqsqqm watpkredpe
     1021 aqsqdpggeg pglpsgsrrq adlrlseeda lnpftsqgsq dppslpstsp pgsressirs
     1081 gpeelptppe palpppplpp gashrhggps ppcsplpgaw tltsslphge pasptgsspt
     1141 plgedhaagt pasplallpl etrpaeetrp aeepqpsasp hpvkplstap aegspdrkqs
     1201 rsslstalss gleklktvts gsiqpvapap qvgqtadakr lkdsgvldqs aryyhlthde
     1261 liglllqrer elsqrdehvq elesyidrll vrimessptl lqippappk
//
LOCUS       XP_061011696             543 aa            linear   MAM 02-DEC-2023
DEFINITION  T-complex protein 1 subunit eta [Dama dama].
ACCESSION   XP_061011696
VERSION     XP_061011696.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155713.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..543
                     /product="T-complex protein 1 subunit eta"
                     /calculated_mol_wt=59316
     Region          5..525
                     /region_name="TCP1_eta"
                     /note="TCP-1 (CTT or eukaryotic type II) chaperonin
                     family, eta subunit. Chaperonins are involved in
                     productive folding of proteins. They share a common
                     general morphology, a double toroid of 2 stacked rings. In
                     contrast to bacterial group I chaperonins (GroEL);
                     cd03340"
                     /db_xref="CDD:239456"
     Site            order(13,17,45..48,50,68,70,74,78,81,379,515..521)
                     /site_type="other"
                     /note="ring oligomerisation interface [polypeptide
                     binding]"
                     /db_xref="CDD:239456"
     Site            order(40..42,92,96,161,391,409,449,492,494)
                     /site_type="other"
                     /note="ATP/Mg binding site [chemical binding]"
                     /db_xref="CDD:239456"
     Site            order(429,447,456,458..459,462)
                     /site_type="active"
                     /note="stacking interactions [active]"
                     /db_xref="CDD:239456"
     CDS             1..543
                     /gene="CCT7"
                     /coded_by="XM_061155713.1:153..1784"
                     /db_xref="GeneID:133065055"
ORIGIN      
        1 mmptpvillk egtdssqgip qlvsnisacq viaeavrttl gprgmdkliv dgrgkatisn
       61 dgatilklld vvhpaaktlv diaksqdaev gdgttsvtll aaeflkqvkp yveeglhpqi
      121 iirafrtatq lavnkikeia vtvkkedkve qrkllekcam talssklisq qkaffakmvv
      181 davmmlddll qlkmigikkv qggaleesql vagvafkktf syagfemqpk kyhnpmiall
      241 nvelelkaek dnaeirvhtv edyqaivdae wnilydklek ihhsgakvvl sklpigdvat
      301 qyfadrdmfc agrvpeedlk rtmmacggsi qtsvnalssd vlghcqvfee tqiggerynf
      361 ftgcpkaktc tiilrggaeq fmeeterslh daimivrrai kndsvvaggg aiemelskyl
      421 rdysrtipgk qqlligayak aleiiprqlc dnagfdatni lnklrarhaq ggmwygvdin
      481 nediadnfea fvwepamvri naltaaseaa clivsvdeti knprstvdap paagrgrgrg
      541 rlh
//
LOCUS       XP_061011697             417 aa            linear   MAM 02-DEC-2023
DEFINITION  histone-lysine N-trimethyltransferase SMYD5 [Dama dama].
ACCESSION   XP_061011697
VERSION     XP_061011697.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155714.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..417
                     /product="histone-lysine N-trimethyltransferase SMYD5"
                     /calculated_mol_wt=46952
     Region          23..384
                     /region_name="SET_SMYD5"
                     /note="SET domain (including iSET domain and post-SET
                     domain) found in SET and MYND domain-containing protein 5
                     (SMYD5) and similar proteins; cd10521"
                     /db_xref="CDD:380919"
     Site            order(32..34,51,264,268,272,282..288,312..316,324,338,
                     349..355,374..378)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380919"
     Site            order(32..34,282..285,312..316,351,374..378)
                     /site_type="other"
                     /note="putative SAM binding site"
                     /db_xref="CDD:380919"
     Site            order(293..294,302,312,350..351,353)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:380919"
     Site            order(318,376,378,381)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380919"
     CDS             1..417
                     /gene="SMYD5"
                     /coded_by="XM_061155714.1:22..1275"
                     /db_xref="GeneID:133065057"
ORIGIN      
        1 maasmcdvfs fcvgvagpar vavevrfvss akgkglfatq lirkgetifv erplvaaqfl
       61 wnalyryrac dhclraleka eenaqrltgk pgqvlphpel ctvrtdlhqn cphcrvtycs
      121 aecrlaaaeq yhqilcpgps qddpahplnk lqeawrsvhy ppetasimlm armvatvkqa
      181 kdkdrwirlf sqfcnktane eeeivhkllg dkfkgqlell rrlftealye ealsqwftpd
      241 gfrslfalvg tngqgigtss lsqwvhacda lelkpqdreq ldafidqlyk dieaatgefl
      301 ncegsglfml qsccnhscvp naetsfpenn fllhvtaled ikpgeeicis yldccqrers
      361 rhsrhkilre nylfvcscpk claeadepnm tseeeeeeee eegepedael gdemtdv
//
LOCUS       XP_061011698             188 aa            linear   MAM 02-DEC-2023
DEFINITION  protease-associated domain-containing protein 1 [Dama dama].
ACCESSION   XP_061011698
VERSION     XP_061011698.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155715.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..188
                     /product="protease-associated domain-containing protein 1"
                     /calculated_mol_wt=20950
     Region          51..168
                     /region_name="PA_hPAP21_like"
                     /note="Protease-associated domain containing proteins like
                     the human secreted glycoprotein hPAP21 (human
                     protease-associated domain-containing protein, 21kDa).
                     This group contains various PA domain-containing proteins
                     similar to hPAP21. Complex N-glycosylation...; cd02127"
                     /db_xref="CDD:239042"
     Site            126..128
                     /site_type="other"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]"
                     /db_xref="CDD:239042"
     CDS             1..188
                     /gene="PRADC1"
                     /coded_by="XM_061155715.1:103..669"
                     /db_xref="GeneID:133065058"
ORIGIN      
        1 mvpgaagwwc lvlwlpacva ahglrihdyl yfqvlspgdi ryiftatpak dfggifhtry
       61 eqihlvpaep seacgelsng ffiqdqialv erggcsflsk trvvqehggr aviisdnavd
      121 ndsfyvemiq dstqrtadip alfllgrdgy mirrsleqhg lpwaiisipv nvtsiptfel
      181 lqppwtfw
//
LOCUS       XP_061011699            4369 aa            linear   MAM 02-DEC-2023
DEFINITION  centrosome-associated protein ALMS1 isoform X1 [Dama dama].
ACCESSION   XP_061011699
VERSION     XP_061011699.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155716.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4369
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..4369
                     /product="centrosome-associated protein ALMS1 isoform X1"
                     /calculated_mol_wt=485713
     Region          1116..1162
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1164..1209
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1211..1256
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1258..1302
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1303..1349
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1350..1396
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1397..1443
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1444..1490
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1491..1537
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1538..1584
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1585..1631
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1632..1678
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1679..1725
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1726..1772
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1773..1819
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1820..1863
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1868..1914
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1916..1960
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1961..2007
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2008..2054
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2055..2101
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2102..2146
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2147..2191
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2192..2234
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          <2258..2289
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2291..2337
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2339..2384
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2386..2431
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          4233..4365
                     /region_name="ALMS_motif"
                     /note="ALMS motif; pfam15309"
                     /db_xref="CDD:464634"
     CDS             1..4369
                     /gene="ALMS1"
                     /coded_by="XM_061155716.1:7..13116"
                     /db_xref="GeneID:133065059"
ORIGIN      
        1 mepedlpwpg eleeeeeeea enldedevvm veemeeeerr epeadfnyes qrrestdded
       61 deeakawlqa hpgatlpqas lprhrysese ltspgkvvpl tchlwqqply qndsgtqisd
      121 tnvaslenia lwgsgddqrt eswhclpqem dssytlntaq tgfnvrekgt evtdfaslee
      181 giltqsenqg kdpnrdllcs pllvlqdnfa spdlplltcl terqefgpds lfhqselefa
      241 plrgipgkse dtewfsrpse vsealfqaas gvasdlvnsc fsvsqhpltg stavksqhsl
      301 ltpeqgtkee tissntlddl ktckdsgnyd avysymswet qevmqepetn ladkdqvsfs
      361 tasdvsdeyi npkgsdsfdv sylyaqygnq gtlqqsekyl askdhdsysd ssdtvdrnki
      421 pkesdnfsfs nmppskqgas hhpeiclisk dhvsfpheva phfnnktphs fwhcllgsgg
      481 sevpsmsdsh yfesvclrap venevkqkvd slesykrnee dlgkglsqcf elkenrntlv
      541 fsgvhprsse iqyienvvvp dnsvevseah ilsrgldtst meisggplqt iksnsnetse
      601 qpyfqeernq eatsvfdgkn vdatenvafq aviasiepsk kestvneiqt dinksltnds
      661 qesepkspdp sllnydenlf fdklnhpryq stpgvfesga skplykkddg dsslywrhnl
      721 ksipsapqei vikplslspe lksssslsek slrqavglgk trstlfqygi dneqflpigk
      781 iksvsaldla eklgssniiy pmkvwtsdsl vsqdlkqhtf eevadssnci lgknvnssyi
      841 tegpsaavgs sfsanlvacd aksqgalpvi snapliavgq ktllkadtgq geipwplgsk
      901 srftihtimq ndsyfveglq gkaesdictl dddteccsvd enavvcskrq eicdqddltg
      961 ecvevaglen llddleicds slhwqstvql pskedssfed svcpsntdin esfssllprf
     1021 vsheptrdle yhssnlrmlr vspdtvsrtl kpltgdtskg giaeipqstf kpgvttfped
     1081 sdtvsplsls pedfpqlagr spqvkntgey tdtlnqqtla dsrlteetlk isaipgladq
     1141 ktgiaavssg sysqrgkpni fypqalpdsh lteeavkaga vpglgdqktg vsavppssys
     1201 pgeklsvlyp qalpdghqte eslsvsvlpg ladqktgkpi vpassysvge epgifyhqvl
     1261 pdsqlpeeal kvlasprpvd qksglptlss tysygekphi fsqqtlpdsh pteqtlkvsa
     1321 aprlaeqktg vptvtstsyp nkekpsifyq pelpnrhliq evhqvsaapg lveqkagisi
     1381 vpstsyshre kpsvvyqqel pdshliqevq qvsaapglae qktgiptips tsyshrekps
     1441 ivyqqelsds qliersqkvs svpglaeqkt giptipstsy shrekssify qqelpdshlt
     1501 qevqqvsaap glaeqktgip tipstsyshr ekssifyqqe lpdshltqev qqvstavgpl
     1561 eqktgiptvp stsyshrekp lifyqqelpe srlteqaqkv ssvpglteqk tgistvasts
     1621 yshrekpsil yqqelpdihv ihevpqvssv pglaeqkari pvipstsysh rekpsilyqq
     1681 elsdshlteq vqkastapgp aeqktgipvi tsasyshrek piifyqqdlp dshltkeaqk
     1741 vpavsglahq ksgipiappa fysqrgktsl fhqqelpdsh lsdqtqkisa iprpvdqntg
     1801 iqtvpsisys rrekpitfyq relpgrllte evlkvsalpk tadqntgiit gssqsylfge
     1861 kpsglsyqqv lqdgslteea lkvspasrps dqktgilllp assysqrekp gifypqvlps
     1921 shlseetlkd savlgptdqk agtsepsgsy shrekssify qqelpdshit gealkisgvs
     1981 gtgdqktgip ivtspsysqk ekpivvyqpv lpdtylteea vnvsdapaqa dqktgipivt
     2041 spsysynekp iifyqqalpd sqltvealka sdvpgpsdqk tgiptvppss ysyrekpiis
     2101 yqhevpdltq valkvfevpg padqkigipp vtstsysyge kpiisyqqel pdasedalkg
     2161 lgpprqadqt vgvrvlppas yshrespifp yqqelpdlte ealkvfalpa padqnaelpi
     2221 gpsssyshke klkilpddqk talpstpsgs yshrekpkts tvigpadqkt plltgypnsy
     2281 sqrvkpsifl qqqlgdrhqs gdilkispva eptdvnsrip iplsssyshr eksnifypqe
     2341 lpdkhlseds lkvstvpgpa dkktvlpavp pssfshrekp ailyhqdfpe rhltednlkf
     2401 ssslgqadqi nglstdppgt ykhsekhklv sdhvqrltdn ldsshtsvis nsmplksqad
     2461 grvvinkpes sgfedvgsee vrdtessskt lkeiqtllme aenialrryn fpaplvpfrd
     2521 vsfiqskkmv cfkeplttde sdgdlsqrqp fteespsnkc iqkdistqtn lkcqrgienw
     2581 efissttvrs plqeaegkar aafdetlkqy kaarsvmrse peeysrtign kivipmmtii
     2641 ksdsssdass cswdsnsles vsdvllnffp ysspktsmtd sreeegmles ddgggssvds
     2701 laahvknllk cesslnhakq ilknaeeees rvrarawnlk fnmaheygys iselneddrr
     2761 kveeikaklf gqgrttdlsk dlqsprgigc kpeavcshiv ieshekgcfr tlpaeqprld
     2821 shpcifrsae pseivrgqrs psswrtrhin lsksldqnns qfkvwnslql qshspfqnfi
     2881 sddleiskgl rmpfhekldp wlselvepar lppeemdchs ssqmlppepm kkfttsitfa
     2941 shrhskcfsd ssflkvgvte gsqcsgpsvg vvnsrfteeq tpprdlkqrt sspsslkvis
     3001 qspdkavtil aenssqsqkl svehsyqeek plersdfkss lpkptasand snfkevhfsd
     3061 nrtlismgrp nstlevkekn vtitadlpsh ifieqevfeq skaphadhhv rkhhspppqh
     3121 qdyvapnlpc hiflekrelf kqskaphvdq lrenhsplpq sqdyiasdlp ssifleqrql
     3181 feqskapdvd hhlrklhspl pqsqdcvvek nnehkpklhi sdvinveakf sdvvspsvps
     3241 qctvvtsast ppsnrkalsc iritlcpktp skldsgnldk ryhsldpatk trmnsefnsd
     3301 lqtissrsle ptsklliskp vaqnqeslgf lgpksssdfq vvqsplpdsn vitqdlktip
     3361 fqnsqivtsr qtqvnssdle eysnpegtpv sadrspeeik tlsspfsgkl ssdavtqitt
     3421 espgkatfss eifvnaedrg heipelntqk sgnvpvkfas sssvqqitvp hgtdgqalll
     3481 pykpsgsskm yyvpqltqip ssvdsksdtt iesshsgsnd aiapdfpaqv lgtrdddlad
     3541 tvnikhkegi yskravtkas lsmgkkpfqk dnadaqvqvl itgdedlsdk nqekeiytkk
     3601 avtktagsee keslqkdstg sstaaasqhs tqlqdakaik qkeevhskrk vpkeawseek
     3661 kslqidiaes rchsefentt hsvfrsakfy fhhpvhlssd qdfcheslgr svfmrhswkd
     3721 ffqhhpdkqr eytclpspcq nmektktdyt rieslsinln lenkelkhat ksqardfpks
     3781 dkqindvkrd pkataeltae htvtlnelwn ryqerqkqqk pqfsakkels lverldrlak
     3841 llqhpithsl qpsestqdds rgeqdvkews dkqqqqrnkl qkkkryksle kchkhtgdlk
     3901 skilsthqag ranqikieqf kfdkyilrkq pgfhyinnts sdsrhsedse lltdtatnil
     3961 stttspvesd iltqtdkevt lhersssist idtarlihaf ghervclspr riklyssvtd
     4021 hqrrylekrs kknkkalntg ypqitsehtr rkhiqvadhv ssdsvsssts sfwssnstlc
     4081 nkqnahmlnk gvqagnleiv ngvrentrdv gmtfptpsss earveedsdv tswseekiee
     4141 krlltsylgd kklkknkksc cegvswfvpv enmksgpkke nmpklhgpgi swfapitntk
     4201 pwreplreqn wqgqhmdrhs slagpgkdpl kpfvratlqe slqlhrpdfi srsgerikrl
     4261 klivqerklq nmlqserdal fntvqewqgy rdpvhllrkr gflaaqkkrp igkkemiqrs
     4321 kriyeqlpev qkkreeekrr seyksyrlra qlykkkvtnq llgrkvpwd
//
LOCUS       XP_061011700            4352 aa            linear   MAM 02-DEC-2023
DEFINITION  centrosome-associated protein ALMS1 isoform X2 [Dama dama].
ACCESSION   XP_061011700
VERSION     XP_061011700.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155717.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4352
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..4352
                     /product="centrosome-associated protein ALMS1 isoform X2"
                     /calculated_mol_wt=483699
     Region          1116..1162
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1164..1209
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1211..1256
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1258..1302
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1303..1349
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1350..1396
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1397..1443
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1444..1490
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1491..1537
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1538..1584
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1585..1631
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1632..1678
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1679..1725
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1726..1772
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1773..1819
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1820..1863
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1868..1914
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1916..1960
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1961..2007
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2008..2054
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2055..2101
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2102..2146
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2147..2191
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2192..2234
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          <2258..2289
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2291..2337
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2339..2384
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2386..2431
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          4216..4348
                     /region_name="ALMS_motif"
                     /note="ALMS motif; pfam15309"
                     /db_xref="CDD:464634"
     CDS             1..4352
                     /gene="ALMS1"
                     /coded_by="XM_061155717.1:7..13065"
                     /db_xref="GeneID:133065059"
ORIGIN      
        1 mepedlpwpg eleeeeeeea enldedevvm veemeeeerr epeadfnyes qrrestdded
       61 deeakawlqa hpgatlpqas lprhrysese ltspgkvvpl tchlwqqply qndsgtqisd
      121 tnvaslenia lwgsgddqrt eswhclpqem dssytlntaq tgfnvrekgt evtdfaslee
      181 giltqsenqg kdpnrdllcs pllvlqdnfa spdlplltcl terqefgpds lfhqselefa
      241 plrgipgkse dtewfsrpse vsealfqaas gvasdlvnsc fsvsqhpltg stavksqhsl
      301 ltpeqgtkee tissntlddl ktckdsgnyd avysymswet qevmqepetn ladkdqvsfs
      361 tasdvsdeyi npkgsdsfdv sylyaqygnq gtlqqsekyl askdhdsysd ssdtvdrnki
      421 pkesdnfsfs nmppskqgas hhpeiclisk dhvsfpheva phfnnktphs fwhcllgsgg
      481 sevpsmsdsh yfesvclrap venevkqkvd slesykrnee dlgkglsqcf elkenrntlv
      541 fsgvhprsse iqyienvvvp dnsvevseah ilsrgldtst meisggplqt iksnsnetse
      601 qpyfqeernq eatsvfdgkn vdatenvafq aviasiepsk kestvneiqt dinksltnds
      661 qesepkspdp sllnydenlf fdklnhpryq stpgvfesga skplykkddg dsslywrhnl
      721 ksipsapqei vikplslspe lksssslsek slrqavglgk trstlfqygi dneqflpigk
      781 iksvsaldla eklgssniiy pmkvwtsdsl vsqdlkqhtf eevadssnci lgknvnssyi
      841 tegpsaavgs sfsanlvacd aksqgalpvi snapliavgq ktllkadtgq geipwplgsk
      901 srftihtimq ndsyfveglq gkaesdictl dddteccsvd enavvcskrq eicdqddltg
      961 ecvevaglen llddleicds slhwqstvql pskedssfed svcpsntdin esfssllprf
     1021 vsheptrdle yhssnlrmlr vspdtvsrtl kpltgdtskg giaeipqstf kpgvttfped
     1081 sdtvsplsls pedfpqlagr spqvkntgey tdtlnqqtla dsrlteetlk isaipgladq
     1141 ktgiaavssg sysqrgkpni fypqalpdsh lteeavkaga vpglgdqktg vsavppssys
     1201 pgeklsvlyp qalpdghqte eslsvsvlpg ladqktgkpi vpassysvge epgifyhqvl
     1261 pdsqlpeeal kvlasprpvd qksglptlss tysygekphi fsqqtlpdsh pteqtlkvsa
     1321 aprlaeqktg vptvtstsyp nkekpsifyq pelpnrhliq evhqvsaapg lveqkagisi
     1381 vpstsyshre kpsvvyqqel pdshliqevq qvsaapglae qktgiptips tsyshrekps
     1441 ivyqqelsds qliersqkvs svpglaeqkt giptipstsy shrekssify qqelpdshlt
     1501 qevqqvsaap glaeqktgip tipstsyshr ekssifyqqe lpdshltqev qqvstavgpl
     1561 eqktgiptvp stsyshrekp lifyqqelpe srlteqaqkv ssvpglteqk tgistvasts
     1621 yshrekpsil yqqelpdihv ihevpqvssv pglaeqkari pvipstsysh rekpsilyqq
     1681 elsdshlteq vqkastapgp aeqktgipvi tsasyshrek piifyqqdlp dshltkeaqk
     1741 vpavsglahq ksgipiappa fysqrgktsl fhqqelpdsh lsdqtqkisa iprpvdqntg
     1801 iqtvpsisys rrekpitfyq relpgrllte evlkvsalpk tadqntgiit gssqsylfge
     1861 kpsglsyqqv lqdgslteea lkvspasrps dqktgilllp assysqrekp gifypqvlps
     1921 shlseetlkd savlgptdqk agtsepsgsy shrekssify qqelpdshit gealkisgvs
     1981 gtgdqktgip ivtspsysqk ekpivvyqpv lpdtylteea vnvsdapaqa dqktgipivt
     2041 spsysynekp iifyqqalpd sqltvealka sdvpgpsdqk tgiptvppss ysyrekpiis
     2101 yqhevpdltq valkvfevpg padqkigipp vtstsysyge kpiisyqqel pdasedalkg
     2161 lgpprqadqt vgvrvlppas yshrespifp yqqelpdlte ealkvfalpa padqnaelpi
     2221 gpsssyshke klkilpddqk talpstpsgs yshrekpkts tvigpadqkt plltgypnsy
     2281 sqrvkpsifl qqqlgdrhqs gdilkispva eptdvnsrip iplsssyshr eksnifypqe
     2341 lpdkhlseds lkvstvpgpa dkktvlpavp pssfshrekp ailyhqdfpe rhltednlkf
     2401 ssslgqadqi nglstdppgt ykhsekhklv sdhvqrltdn ldsshtsvis nsmplksqad
     2461 grvvinkpes sgfedvgsee vrdtessskt lkeiqtllme aenialrryn fpaplvpfrd
     2521 vsfiqskkmv cfkeplttde sdgdlsqrqp fteespsnkc iqkdistqtn lkcqrgienw
     2581 efissttvrs plqeaegkar aafdetlkqy kaarsvmrse peeysrtign kivipmmtii
     2641 ksdsssdass cswdsnsles vsdvllnffp ysspktsmtd sreeegmles ddgggssvds
     2701 laahvknllk cesslnhakq ilknaeeees rvrarelned drrkveeika klfgqgrttd
     2761 lskdlqsprg igckpeavcs hivieshekg cfrtlpaeqp rldshpcifr saepseivrg
     2821 qrspsswrtr hinlsksldq nnsqfkvwns lqlqshspfq nfisddleis kglrmpfhek
     2881 ldpwlselve parlppeemd chsssqmlpp epmkkfttsi tfashrhskc fsdssflkvg
     2941 vtegsqcsgp svgvvnsrft eeqtpprdlk qrtsspsslk visqspdkav tilaenssqs
     3001 qklsvehsyq eekplersdf ksslpkptas andsnfkevh fsdnrtlism grpnstlevk
     3061 eknvtitadl pshifieqev feqskaphad hhvrkhhspp pqhqdyvapn lpchiflekr
     3121 elfkqskaph vdqlrenhsp lpqsqdyias dlpssifleq rqlfeqskap dvdhhlrklh
     3181 splpqsqdcv veknnehkpk lhisdvinve akfsdvvsps vpsqctvvts astppsnrka
     3241 lsciritlcp ktpskldsgn ldkryhsldp atktrmnsef nsdlqtissr sleptsklli
     3301 skpvaqnqes lgflgpksss dfqvvqsplp dsnvitqdlk tipfqnsqiv tsrqtqvnss
     3361 dleeysnpeg tpvsadrspe eiktlsspfs gklssdavtq ittespgkat fsseifvnae
     3421 drgheipeln tqksgnvpvk fassssvqqi tvphgtdgqa lllpykpsgs skmyyvpqlt
     3481 qipssvdsks dttiesshsg sndaiapdfp aqvlgtrddd ladtvnikhk egiyskravt
     3541 kaslsmgkkp fqkdnadaqv qvlitgdedl sdknqekeiy tkkavtktag seekeslqkd
     3601 stgsstaaas qhstqlqdak aikqkeevhs krkvpkeaws eekkslqidi aesrchsefe
     3661 ntthsvfrsa kfyfhhpvhl ssdqdfches lgrsvfmrhs wkdffqhhpd kqreytclps
     3721 pcqnmektkt dytrieslsi nlnlenkelk hatksqardf pksdkqindv krdpkatael
     3781 taehtvtlne lwnryqerqk qqkpqfsakk elslverldr lakllqhpit hslqpsestq
     3841 ddsrgeqdvk ewsdkqqqqr nklqkkkryk slekchkhtg dlkskilsth qagranqiki
     3901 eqfkfdkyil rkqpgfhyin ntssdsrhse dselltdtat nilstttspv esdiltqtdk
     3961 evtlhersss istidtarli hafghervcl sprriklyss vtdhqrryle krskknkkal
     4021 ntgypqitse htrrkhiqva dhvssdsvss stssfwssns tlcnkqnahm lnkgvqagnl
     4081 eivngvrent rdvgmtfptp sssearveed sdvtswseek ieekrlltsy lgdkklkknk
     4141 ksccegvswf vpvenmksgp kkenmpklhg pgiswfapit ntkpwreplr eqnwqgqhmd
     4201 rhsslagpgk dplkpfvrat lqeslqlhrp dfisrsgeri krlklivqer klqnmlqser
     4261 dalfntvqew qgyrdpvhll rkrgflaaqk krpigkkemi qrskriyeql pevqkkreee
     4321 krrseyksyr lraqlykkkv tnqllgrkvp wd
//
LOCUS       XP_061011701            4351 aa            linear   MAM 02-DEC-2023
DEFINITION  centrosome-associated protein ALMS1 isoform X3 [Dama dama].
ACCESSION   XP_061011701
VERSION     XP_061011701.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155718.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4351
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..4351
                     /product="centrosome-associated protein ALMS1 isoform X3"
                     /calculated_mol_wt=483770
     Region          1098..1144
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1146..1191
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1193..1238
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1240..1284
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1285..1331
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1332..1378
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1379..1425
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1426..1472
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1473..1519
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1520..1566
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1567..1613
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1614..1660
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1661..1707
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1708..1754
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1755..1801
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1802..1845
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1850..1896
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1898..1942
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1943..1989
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1990..2036
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2037..2083
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2084..2128
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2129..2173
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2174..2216
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          <2240..2271
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2273..2319
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2321..2366
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2368..2413
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          4215..4347
                     /region_name="ALMS_motif"
                     /note="ALMS motif; pfam15309"
                     /db_xref="CDD:464634"
     CDS             1..4351
                     /gene="ALMS1"
                     /coded_by="XM_061155718.1:7..13062"
                     /db_xref="GeneID:133065059"
ORIGIN      
        1 mepedlpwpg eleeeeeeea enldedevvm veemeeeerr epeadfnyes qrrestdded
       61 deeakawlqa hpgatlpqas lprhrysese ltspgkvvpl tchlwqqply qndsgtqisd
      121 tnvaslenia lwgsgddqrt eswhclpqem dssytlntaq tgfnvrekgt evtdfaslee
      181 giltqsenqg kdpnrdllcs pllerqefgp dslfhqsele faplrgipgk sedtewfsrp
      241 sevsealfqa asgvasdlvn scfsvsqhpl tgstavksqh slltpeqgtk eetissntld
      301 dlktckdsgn ydavysymsw etqevmqepe tnladkdqvs fstasdvsde yinpkgsdsf
      361 dvsylyaqyg nqgtlqqsek ylaskdhdsy sdssdtvdrn kipkesdnfs fsnmppskqg
      421 ashhpeicli skdhvsfphe vaphfnnktp hsfwhcllgs ggsevpsmsd shyfesvclr
      481 apvenevkqk vdslesykrn eedlgkglsq cfelkenrnt lvfsgvhprs seiqyienvv
      541 vpdnsvevse ahilsrgldt stmeisggpl qtiksnsnet seqpyfqeer nqeatsvfdg
      601 knvdatenva fqaviasiep skkestvnei qtdinksltn dsqesepksp dpsllnyden
      661 lffdklnhpr yqstpgvfes gaskplykkd dgdsslywrh nlksipsapq eivikplsls
      721 pelkssssls ekslrqavgl gktrstlfqy gidneqflpi gkiksvsald laeklgssni
      781 iypmkvwtsd slvsqdlkqh tfeevadssn cilgknvnss yitegpsaav gssfsanlva
      841 cdaksqgalp visnapliav gqktllkadt gqgeipwplg sksrftihti mqndsyfveg
      901 lqgkaesdic tldddteccs vdenavvcsk rqeicdqddl tgecvevagl enllddleic
      961 dsslhwqstv qlpskedssf edsvcpsntd inesfssllp rfvsheptrd leyhssnlrm
     1021 lrvspdtvsr tlkpltgdts kggiaeipqs tfkpgvttfp edsdtvspls lspedfpqla
     1081 grspqvkntg eytdtlnqqt ladsrlteet lkisaipgla dqktgiaavs sgsysqrgkp
     1141 nifypqalpd shlteeavka gavpglgdqk tgvsavppss yspgeklsvl ypqalpdghq
     1201 teeslsvsvl pgladqktgk pivpassysv geepgifyhq vlpdsqlpee alkvlasprp
     1261 vdqksglptl sstysygekp hifsqqtlpd shpteqtlkv saaprlaeqk tgvptvtsts
     1321 ypnkekpsif yqpelpnrhl iqevhqvsaa pglveqkagi sivpstsysh rekpsvvyqq
     1381 elpdshliqe vqqvsaapgl aeqktgipti pstsyshrek psivyqqels dsqliersqk
     1441 vssvpglaeq ktgiptipst syshrekssi fyqqelpdsh ltqevqqvsa apglaeqktg
     1501 iptipstsys hrekssifyq qelpdshltq evqqvstavg pleqktgipt vpstsyshre
     1561 kplifyqqel pesrlteqaq kvssvpglte qktgistvas tsyshrekps ilyqqelpdi
     1621 hvihevpqvs svpglaeqka ripvipstsy shrekpsily qqelsdshlt eqvqkastap
     1681 gpaeqktgip vitsasyshr ekpiifyqqd lpdshltkea qkvpavsgla hqksgipiap
     1741 pafysqrgkt slfhqqelpd shlsdqtqki saiprpvdqn tgiqtvpsis ysrrekpitf
     1801 yqrelpgrll teevlkvsal pktadqntgi itgssqsylf gekpsglsyq qvlqdgslte
     1861 ealkvspasr psdqktgill lpassysqre kpgifypqvl psshlseetl kdsavlgptd
     1921 qkagtsepsg syshrekssi fyqqelpdsh itgealkisg vsgtgdqktg ipivtspsys
     1981 qkekpivvyq pvlpdtylte eavnvsdapa qadqktgipi vtspsysyne kpiifyqqal
     2041 pdsqltveal kasdvpgpsd qktgiptvpp ssysyrekpi isyqhevpdl tqvalkvfev
     2101 pgpadqkigi ppvtstsysy gekpiisyqq elpdasedal kglgpprqad qtvgvrvlpp
     2161 asyshrespi fpyqqelpdl teealkvfal papadqnael pigpsssysh keklkilpdd
     2221 qktalpstps gsyshrekpk tstvigpadq ktplltgypn sysqrvkpsi flqqqlgdrh
     2281 qsgdilkisp vaeptdvnsr ipiplsssys hreksnifyp qelpdkhlse dslkvstvpg
     2341 padkktvlpa vppssfshre kpailyhqdf perhltednl kfssslgqad qinglstdpp
     2401 gtykhsekhk lvsdhvqrlt dnldsshtsv isnsmplksq adgrvvinkp essgfedvgs
     2461 eevrdtesss ktlkeiqtll meaenialrr ynfpaplvpf rdvsfiqskk mvcfkepltt
     2521 desdgdlsqr qpfteespsn kciqkdistq tnlkcqrgie nwefissttv rsplqeaegk
     2581 araafdetlk qykaarsvmr sepeeysrti gnkivipmmt iiksdsssda sscswdsnsl
     2641 esvsdvllnf fpysspktsm tdsreeegml esddgggssv dslaahvknl lkcesslnha
     2701 kqilknaeee esrvrarawn lkfnmaheyg ysiselnedd rrkveeikak lfgqgrttdl
     2761 skdlqsprgi gckpeavcsh ivieshekgc frtlpaeqpr ldshpcifrs aepseivrgq
     2821 rspsswrtrh inlsksldqn nsqfkvwnsl qlqshspfqn fisddleisk glrmpfhekl
     2881 dpwlselvep arlppeemdc hsssqmlppe pmkkfttsit fashrhskcf sdssflkvgv
     2941 tegsqcsgps vgvvnsrfte eqtpprdlkq rtsspsslkv isqspdkavt ilaenssqsq
     3001 klsvehsyqe ekplersdfk sslpkptasa ndsnfkevhf sdnrtlismg rpnstlevke
     3061 knvtitadlp shifieqevf eqskaphadh hvrkhhsppp qhqdyvapnl pchiflekre
     3121 lfkqskaphv dqlrenhspl pqsqdyiasd lpssifleqr qlfeqskapd vdhhlrklhs
     3181 plpqsqdcvv eknnehkpkl hisdvinvea kfsdvvspsv psqctvvtsa stppsnrkal
     3241 sciritlcpk tpskldsgnl dkryhsldpa tktrmnsefn sdlqtissrs leptskllis
     3301 kpvaqnqesl gflgpksssd fqvvqsplpd snvitqdlkt ipfqnsqivt srqtqvnssd
     3361 leeysnpegt pvsadrspee iktlsspfsg klssdavtqi ttespgkatf sseifvnaed
     3421 rgheipelnt qksgnvpvkf assssvqqit vphgtdgqal llpykpsgss kmyyvpqltq
     3481 ipssvdsksd ttiesshsgs ndaiapdfpa qvlgtrdddl adtvnikhke giyskravtk
     3541 aslsmgkkpf qkdnadaqvq vlitgdedls dknqekeiyt kkavtktags eekeslqkds
     3601 tgsstaaasq hstqlqdaka ikqkeevhsk rkvpkeawse ekkslqidia esrchsefen
     3661 tthsvfrsak fyfhhpvhls sdqdfchesl grsvfmrhsw kdffqhhpdk qreytclpsp
     3721 cqnmektktd ytrieslsin lnlenkelkh atksqardfp ksdkqindvk rdpkataelt
     3781 aehtvtlnel wnryqerqkq qkpqfsakke lslverldrl akllqhpith slqpsestqd
     3841 dsrgeqdvke wsdkqqqqrn klqkkkryks lekchkhtgd lkskilsthq agranqikie
     3901 qfkfdkyilr kqpgfhyinn tssdsrhsed selltdtatn ilstttspve sdiltqtdke
     3961 vtlhersssi stidtarlih afghervcls prriklyssv tdhqrrylek rskknkkaln
     4021 tgypqitseh trrkhiqvad hvssdsvsss tssfwssnst lcnkqnahml nkgvqagnle
     4081 ivngvrentr dvgmtfptps ssearveeds dvtswseeki eekrlltsyl gdkklkknkk
     4141 sccegvswfv pvenmksgpk kenmpklhgp giswfapitn tkpwreplre qnwqgqhmdr
     4201 hsslagpgkd plkpfvratl qeslqlhrpd fisrsgerik rlklivqerk lqnmlqserd
     4261 alfntvqewq gyrdpvhllr krgflaaqkk rpigkkemiq rskriyeqlp evqkkreeek
     4321 rrseyksyrl raqlykkkvt nqllgrkvpw d
//
LOCUS       XP_061011702            4328 aa            linear   MAM 02-DEC-2023
DEFINITION  centrosome-associated protein ALMS1 isoform X4 [Dama dama].
ACCESSION   XP_061011702
VERSION     XP_061011702.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155719.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4328
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..4328
                     /product="centrosome-associated protein ALMS1 isoform X4"
                     /calculated_mol_wt=480921
     Region          1116..1162
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1164..1209
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1211..1256
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1258..1302
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1303..1349
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1350..1396
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1397..1443
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1444..1490
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1491..1537
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1538..1584
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1585..1631
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1632..1678
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1679..1725
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1726..1772
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1773..1819
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1820..1863
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1868..1914
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1916..1960
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1961..2007
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2008..2054
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2055..2101
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2102..2146
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2147..2191
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2192..2234
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          <2258..2289
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2291..2337
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2339..2384
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2386..2431
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          4192..4324
                     /region_name="ALMS_motif"
                     /note="ALMS motif; pfam15309"
                     /db_xref="CDD:464634"
     CDS             1..4328
                     /gene="ALMS1"
                     /coded_by="XM_061155719.1:7..12993"
                     /db_xref="GeneID:133065059"
ORIGIN      
        1 mepedlpwpg eleeeeeeea enldedevvm veemeeeerr epeadfnyes qrrestdded
       61 deeakawlqa hpgatlpqas lprhrysese ltspgkvvpl tchlwqqply qndsgtqisd
      121 tnvaslenia lwgsgddqrt eswhclpqem dssytlntaq tgfnvrekgt evtdfaslee
      181 giltqsenqg kdpnrdllcs pllvlqdnfa spdlplltcl terqefgpds lfhqselefa
      241 plrgipgkse dtewfsrpse vsealfqaas gvasdlvnsc fsvsqhpltg stavksqhsl
      301 ltpeqgtkee tissntlddl ktckdsgnyd avysymswet qevmqepetn ladkdqvsfs
      361 tasdvsdeyi npkgsdsfdv sylyaqygnq gtlqqsekyl askdhdsysd ssdtvdrnki
      421 pkesdnfsfs nmppskqgas hhpeiclisk dhvsfpheva phfnnktphs fwhcllgsgg
      481 sevpsmsdsh yfesvclrap venevkqkvd slesykrnee dlgkglsqcf elkenrntlv
      541 fsgvhprsse iqyienvvvp dnsvevseah ilsrgldtst meisggplqt iksnsnetse
      601 qpyfqeernq eatsvfdgkn vdatenvafq aviasiepsk kestvneiqt dinksltnds
      661 qesepkspdp sllnydenlf fdklnhpryq stpgvfesga skplykkddg dsslywrhnl
      721 ksipsapqei vikplslspe lksssslsek slrqavglgk trstlfqygi dneqflpigk
      781 iksvsaldla eklgssniiy pmkvwtsdsl vsqdlkqhtf eevadssnci lgknvnssyi
      841 tegpsaavgs sfsanlvacd aksqgalpvi snapliavgq ktllkadtgq geipwplgsk
      901 srftihtimq ndsyfveglq gkaesdictl dddteccsvd enavvcskrq eicdqddltg
      961 ecvevaglen llddleicds slhwqstvql pskedssfed svcpsntdin esfssllprf
     1021 vsheptrdle yhssnlrmlr vspdtvsrtl kpltgdtskg giaeipqstf kpgvttfped
     1081 sdtvsplsls pedfpqlagr spqvkntgey tdtlnqqtla dsrlteetlk isaipgladq
     1141 ktgiaavssg sysqrgkpni fypqalpdsh lteeavkaga vpglgdqktg vsavppssys
     1201 pgeklsvlyp qalpdghqte eslsvsvlpg ladqktgkpi vpassysvge epgifyhqvl
     1261 pdsqlpeeal kvlasprpvd qksglptlss tysygekphi fsqqtlpdsh pteqtlkvsa
     1321 aprlaeqktg vptvtstsyp nkekpsifyq pelpnrhliq evhqvsaapg lveqkagisi
     1381 vpstsyshre kpsvvyqqel pdshliqevq qvsaapglae qktgiptips tsyshrekps
     1441 ivyqqelsds qliersqkvs svpglaeqkt giptipstsy shrekssify qqelpdshlt
     1501 qevqqvsaap glaeqktgip tipstsyshr ekssifyqqe lpdshltqev qqvstavgpl
     1561 eqktgiptvp stsyshrekp lifyqqelpe srlteqaqkv ssvpglteqk tgistvasts
     1621 yshrekpsil yqqelpdihv ihevpqvssv pglaeqkari pvipstsysh rekpsilyqq
     1681 elsdshlteq vqkastapgp aeqktgipvi tsasyshrek piifyqqdlp dshltkeaqk
     1741 vpavsglahq ksgipiappa fysqrgktsl fhqqelpdsh lsdqtqkisa iprpvdqntg
     1801 iqtvpsisys rrekpitfyq relpgrllte evlkvsalpk tadqntgiit gssqsylfge
     1861 kpsglsyqqv lqdgslteea lkvspasrps dqktgilllp assysqrekp gifypqvlps
     1921 shlseetlkd savlgptdqk agtsepsgsy shrekssify qqelpdshit gealkisgvs
     1981 gtgdqktgip ivtspsysqk ekpivvyqpv lpdtylteea vnvsdapaqa dqktgipivt
     2041 spsysynekp iifyqqalpd sqltvealka sdvpgpsdqk tgiptvppss ysyrekpiis
     2101 yqhevpdltq valkvfevpg padqkigipp vtstsysyge kpiisyqqel pdasedalkg
     2161 lgpprqadqt vgvrvlppas yshrespifp yqqelpdlte ealkvfalpa padqnaelpi
     2221 gpsssyshke klkilpddqk talpstpsgs yshrekpkts tvigpadqkt plltgypnsy
     2281 sqrvkpsifl qqqlgdrhqs gdilkispva eptdvnsrip iplsssyshr eksnifypqe
     2341 lpdkhlseds lkvstvpgpa dkktvlpavp pssfshrekp ailyhqdfpe rhltednlkf
     2401 ssslgqadqi nglstdppgt ykhsekhklv sdhvqrltdn ldsshtsvis nsmplksqad
     2461 grvvinkpes sgfedvgsee vrdtessskt lkeiqtllme aenialrryn fpaplvpfrd
     2521 vsfiqskkmv cfkeplttde sdgdlsqrqp fteespsnkc iqkdistqtn lkcqrgienw
     2581 efissttvrs plqeaegkar aafdetlkqy kaarsvmrse peeysrtign kivipmmtii
     2641 ksdsssdass cswdsnsles vsdvllnffp ysspktsmtd sreeegmles ddgggssvds
     2701 laahvknllk cesslnhakq ilknaeeees rvrarawnlk fnmaheygys iselneddrr
     2761 kveeikaklf gqgrttdlsk dlqsprgigc kpeavcshiv ieshekgcfr tlpaeqprld
     2821 shpcifrsae pseivrgqrs psswrtrhin lsksldqnns qfkvwnslql qshspfqnfi
     2881 sddleiskgl rmpfhekldp wlselvepar lppeemdchs ssqmlppepm kkfttsitfa
     2941 shrhskcfsd ssflkvgvte gsqcsgpsvg vvnsrfteeq tpprdlkqrt sspsslkvis
     3001 qspdkavtil aenssqsqkl svehsyqeek plersdfkss lpkptasand snfkevhfsd
     3061 nrtlismgrp nstlevkekn vtitadlpsh ifieqevfeq skaphadhhv rkhhspppqh
     3121 qdyvapnlpc hiflekrelf kqskaphvdq lrenhsplpq sqdyiasdlp ssifleqrql
     3181 feqskapdvd hhlrklhspl pqsqdcvvek nnehkpklhi sdvinveakf sdvvspsvps
     3241 qctvvtsast ppsnrkalsc iritlcpktp skldsgnldk ryhsldpatk trmnsefnsd
     3301 lqtissrsle ptsklliskp vaqnqeslgf lgpksssdfq vvqsplpdsn vitqdlktip
     3361 fqnsqivtsr qtqvnssdle eysnpegtpv sadrspeeik tlsspfsgkl ssdavtqitt
     3421 espgkatfss eifvnaedrg heipelntqk sgnvpvkfas sssvqqitvp hgtdgqalll
     3481 pykpsgsskm yyvpqltqip ssvdsksdtt iesshsgsnd aiapdfpaqv lgtrdddlad
     3541 tvnikhkegi yskravtkas lsmgkkpfqk dnadaqvqvl itgdedlsdk nqekeiytkk
     3601 avtktagsee keslqkdstg sstaaasqhs tqlqdakaik qkeevhskrk vpkeawseek
     3661 kslqidiaes rchsefentt hsvfrsakfy fhhpvhlssd qdfcheslgr svfmrhswkd
     3721 ffqhhpdkqr eytclpspcq nmektktdyt rieslsinln lenkelkhat ksqardfpks
     3781 dkqindvkrd pkataeltae htvtlnelwn ryqerqkqqk pqfsakkels lverldrlak
     3841 llqhpithsl qpsestqdds rgeqdvkews dkqqqqrnkl qkkkryksle kchkhtgdlk
     3901 nsrhsedsel ltdtatnils tttspvesdi ltqtdkevtl hersssisti dtarlihafg
     3961 hervclsprr iklyssvtdh qrrylekrsk knkkalntgy pqitsehtrr khiqvadhvs
     4021 sdsvssstss fwssnstlcn kqnahmlnkg vqagnleivn gvrentrdvg mtfptpssse
     4081 arveedsdvt swseekieek rlltsylgdk klkknkkscc egvswfvpve nmksgpkken
     4141 mpklhgpgis wfapitntkp wreplreqnw qgqhmdrhss lagpgkdplk pfvratlqes
     4201 lqlhrpdfis rsgerikrlk livqerklqn mlqserdalf ntvqewqgyr dpvhllrkrg
     4261 flaaqkkrpi gkkemiqrsk riyeqlpevq kkreeekrrs eyksyrlraq lykkkvtnql
     4321 lgrkvpwd
//
LOCUS       XP_061011703            4327 aa            linear   MAM 02-DEC-2023
DEFINITION  centrosome-associated protein ALMS1 isoform X5 [Dama dama].
ACCESSION   XP_061011703
VERSION     XP_061011703.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155720.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4327
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..4327
                     /product="centrosome-associated protein ALMS1 isoform X5"
                     /calculated_mol_wt=481116
     Region          1074..1120
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1122..1167
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1169..1214
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1216..1260
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1261..1307
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1308..1354
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1355..1401
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1402..1448
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1449..1495
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1496..1542
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1543..1589
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1590..1636
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1637..1683
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1684..1730
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1731..1777
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1778..1821
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1826..1872
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1874..1918
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1919..1965
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1966..2012
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2013..2059
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2060..2104
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2105..2149
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2150..2192
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          <2216..2247
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2249..2295
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2297..2342
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2344..2389
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          4191..4323
                     /region_name="ALMS_motif"
                     /note="ALMS motif; pfam15309"
                     /db_xref="CDD:464634"
     CDS             1..4327
                     /gene="ALMS1"
                     /coded_by="XM_061155720.1:7..12990"
                     /db_xref="GeneID:133065059"
ORIGIN      
        1 mepedlpwpg eleeeeeeea enldedevvm veemeeeerr epeadfnyes qrrestdded
       61 deeakawlqa hpgatlpqas lprhrysese ltspgkrtes whclpqemds sytlntaqtg
      121 fnvrekgtev tdfasleegi ltqsenqgkd pnrdllcspl lvlqdnfasp dlplltclte
      181 rqefgpdslf hqselefapl rgipgksedt ewfsrpsevs ealfqaasgv asdlvnscfs
      241 vsqhpltgst avksqhsllt peqgtkeeti ssntlddlkt ckdsgnydav ysymswetqe
      301 vmqepetnla dkdqvsfsta sdvsdeyinp kgsdsfdvsy lyaqygnqgt lqqsekylas
      361 kdhdsysdss dtvdrnkipk esdnfsfsnm ppskqgashh peicliskdh vsfphevaph
      421 fnnktphsfw hcllgsggse vpsmsdshyf esvclrapve nevkqkvdsl esykrneedl
      481 gkglsqcfel kenrntlvfs gvhprsseiq yienvvvpdn svevseahil srgldtstme
      541 isggplqtik snsnetseqp yfqeernqea tsvfdgknvd atenvafqav iasiepskke
      601 stvneiqtdi nksltndsqe sepkspdpsl lnydenlffd klnhpryqst pgvfesgask
      661 plykkddgds slywrhnlks ipsapqeivi kplslspelk sssslseksl rqavglgktr
      721 stlfqygidn eqflpigkik svsaldlaek lgssniiypm kvwtsdslvs qdlkqhtfee
      781 vadssncilg knvnssyite gpsaavgssf sanlvacdak sqgalpvisn apliavgqkt
      841 llkadtgqge ipwplgsksr ftihtimqnd syfveglqgk aesdictldd dteccsvden
      901 avvcskrqei cdqddltgec vevaglenll ddleicdssl hwqstvqlps kedssfedsv
      961 cpsntdines fssllprfvs heptrdleyh ssnlrmlrvs pdtvsrtlkp ltgdtskggi
     1021 aeipqstfkp gvttfpedsd tvsplslspe dfpqlagrsp qvkntgeytd tlnqqtlads
     1081 rlteetlkis aipgladqkt giaavssgsy sqrgkpnify pqalpdshlt eeavkagavp
     1141 glgdqktgvs avppssyspg eklsvlypqa lpdghqtees lsvsvlpgla dqktgkpivp
     1201 assysvgeep gifyhqvlpd sqlpeealkv lasprpvdqk sglptlssty sygekphifs
     1261 qqtlpdshpt eqtlkvsaap rlaeqktgvp tvtstsypnk ekpsifyqpe lpnrhliqev
     1321 hqvsaapglv eqkagisivp stsyshrekp svvyqqelpd shliqevqqv saapglaeqk
     1381 tgiptipsts yshrekpsiv yqqelsdsql iersqkvssv pglaeqktgi ptipstsysh
     1441 rekssifyqq elpdshltqe vqqvsaapgl aeqktgipti pstsyshrek ssifyqqelp
     1501 dshltqevqq vstavgpleq ktgiptvpst syshrekpli fyqqelpesr lteqaqkvss
     1561 vpglteqktg istvastsys hrekpsilyq qelpdihvih evpqvssvpg laeqkaripv
     1621 ipstsyshre kpsilyqqel sdshlteqvq kastapgpae qktgipvits asyshrekpi
     1681 ifyqqdlpds hltkeaqkvp avsglahqks gipiappafy sqrgktslfh qqelpdshls
     1741 dqtqkisaip rpvdqntgiq tvpsisysrr ekpitfyqre lpgrllteev lkvsalpkta
     1801 dqntgiitgs sqsylfgekp sglsyqqvlq dgslteealk vspasrpsdq ktgilllpas
     1861 sysqrekpgi fypqvlpssh lseetlkdsa vlgptdqkag tsepsgsysh rekssifyqq
     1921 elpdshitge alkisgvsgt gdqktgipiv tspsysqkek pivvyqpvlp dtylteeavn
     1981 vsdapaqadq ktgipivtsp sysynekpii fyqqalpdsq ltvealkasd vpgpsdqktg
     2041 iptvppssys yrekpiisyq hevpdltqva lkvfevpgpa dqkigippvt stsysygekp
     2101 iisyqqelpd asedalkglg pprqadqtvg vrvlppasys hrespifpyq qelpdlteea
     2161 lkvfalpapa dqnaelpigp sssyshkekl kilpddqkta lpstpsgsys hrekpktstv
     2221 igpadqktpl ltgypnsysq rvkpsiflqq qlgdrhqsgd ilkispvaep tdvnsripip
     2281 lsssyshrek snifypqelp dkhlsedslk vstvpgpadk ktvlpavpps sfshrekpai
     2341 lyhqdfperh ltednlkfss slgqadqing lstdppgtyk hsekhklvsd hvqrltdnld
     2401 sshtsvisns mplksqadgr vvinkpessg fedvgseevr dtesssktlk eiqtllmeae
     2461 nialrrynfp aplvpfrdvs fiqskkmvcf keplttdesd gdlsqrqpft eespsnkciq
     2521 kdistqtnlk cqrgienwef issttvrspl qeaegkaraa fdetlkqyka arsvmrsepe
     2581 eysrtignki vipmmtiiks dsssdasscs wdsnslesvs dvllnffpys spktsmtdsr
     2641 eeegmlesdd gggssvdsla ahvknllkce sslnhakqil knaeeeesrv rarawnlkfn
     2701 maheygysis elneddrrkv eeikaklfgq grttdlskdl qsprgigckp eavcshivie
     2761 shekgcfrtl paeqprldsh pcifrsaeps eivrgqrsps swrtrhinls ksldqnnsqf
     2821 kvwnslqlqs hspfqnfisd dleiskglrm pfhekldpwl selveparlp peemdchsss
     2881 qmlppepmkk fttsitfash rhskcfsdss flkvgvtegs qcsgpsvgvv nsrfteeqtp
     2941 prdlkqrtss psslkvisqs pdkavtilae nssqsqklsv ehsyqeekpl ersdfksslp
     3001 kptasandsn fkevhfsdnr tlismgrpns tlevkeknvt itadlpshif ieqevfeqsk
     3061 aphadhhvrk hhspppqhqd yvapnlpchi flekrelfkq skaphvdqlr enhsplpqsq
     3121 dyiasdlpss ifleqrqlfe qskapdvdhh lrklhsplpq sqdcvveknn ehkpklhisd
     3181 vinveakfsd vvspsvpsqc tvvtsastpp snrkalscir itlcpktpsk ldsgnldkry
     3241 hsldpatktr mnsefnsdlq tissrslept sklliskpva qnqeslgflg pksssdfqvv
     3301 qsplpdsnvi tqdlktipfq nsqivtsrqt qvnssdleey snpegtpvsa drspeeiktl
     3361 sspfsgklss davtqittes pgkatfssei fvnaedrghe ipelntqksg nvpvkfasss
     3421 svqqitvphg tdgqalllpy kpsgsskmyy vpqltqipss vdsksdttie sshsgsndai
     3481 apdfpaqvlg trdddladtv nikhkegiys kravtkasls mgkkpfqkdn adaqvqvlit
     3541 gdedlsdknq ekeiytkkav tktagseeke slqkdstgss taaasqhstq lqdakaikqk
     3601 eevhskrkvp keawseekks lqidiaesrc hsefentths vfrsakfyfh hpvhlssdqd
     3661 fcheslgrsv fmrhswkdff qhhpdkqrey tclpspcqnm ektktdytri eslsinlnle
     3721 nkelkhatks qardfpksdk qindvkrdpk ataeltaeht vtlnelwnry qerqkqqkpq
     3781 fsakkelslv erldrlakll qhpithslqp sestqddsrg eqdvkewsdk qqqqrnklqk
     3841 kkrykslekc hkhtgdlksk ilsthqagra nqikieqfkf dkyilrkqpg fhyinntssd
     3901 srhsedsell tdtatnilst ttspvesdil tqtdkevtlh ersssistid tarlihafgh
     3961 ervclsprri klyssvtdhq rrylekrskk nkkalntgyp qitsehtrrk hiqvadhvss
     4021 dsvssstssf wssnstlcnk qnahmlnkgv qagnleivng vrentrdvgm tfptpsssea
     4081 rveedsdvts wseekieekr lltsylgdkk lkknkkscce gvswfvpven mksgpkkenm
     4141 pklhgpgisw fapitntkpw replreqnwq gqhmdrhssl agpgkdplkp fvratlqesl
     4201 qlhrpdfisr sgerikrlkl ivqerklqnm lqserdalfn tvqewqgyrd pvhllrkrgf
     4261 laaqkkrpig kkemiqrskr iyeqlpevqk kreeekrrse yksyrlraql ykkkvtnqll
     4321 grkvpwd
//
LOCUS       XP_061011704            4323 aa            linear   MAM 02-DEC-2023
DEFINITION  centrosome-associated protein ALMS1 isoform X6 [Dama dama].
ACCESSION   XP_061011704
VERSION     XP_061011704.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155721.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4323
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..4323
                     /product="centrosome-associated protein ALMS1 isoform X6"
                     /calculated_mol_wt=480631
     Region          1116..1162
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1164..1209
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1211..1256
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1258..1302
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1303..1349
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1350..1396
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1397..1443
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1444..1490
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1491..1537
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1538..1584
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1585..1631
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1632..1678
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1679..1725
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1726..1772
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1773..1819
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1820..1863
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1868..1914
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1916..1960
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1961..2007
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2008..2054
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2055..2101
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2102..2146
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2147..2191
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2192..2234
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          <2258..2289
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2291..2337
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2339..2384
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2386..2431
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          4187..4319
                     /region_name="ALMS_motif"
                     /note="ALMS motif; pfam15309"
                     /db_xref="CDD:464634"
     CDS             1..4323
                     /gene="ALMS1"
                     /coded_by="XM_061155721.1:7..12978"
                     /db_xref="GeneID:133065059"
ORIGIN      
        1 mepedlpwpg eleeeeeeea enldedevvm veemeeeerr epeadfnyes qrrestdded
       61 deeakawlqa hpgatlpqas lprhrysese ltspgkvvpl tchlwqqply qndsgtqisd
      121 tnvaslenia lwgsgddqrt eswhclpqem dssytlntaq tgfnvrekgt evtdfaslee
      181 giltqsenqg kdpnrdllcs pllvlqdnfa spdlplltcl terqefgpds lfhqselefa
      241 plrgipgkse dtewfsrpse vsealfqaas gvasdlvnsc fsvsqhpltg stavksqhsl
      301 ltpeqgtkee tissntlddl ktckdsgnyd avysymswet qevmqepetn ladkdqvsfs
      361 tasdvsdeyi npkgsdsfdv sylyaqygnq gtlqqsekyl askdhdsysd ssdtvdrnki
      421 pkesdnfsfs nmppskqgas hhpeiclisk dhvsfpheva phfnnktphs fwhcllgsgg
      481 sevpsmsdsh yfesvclrap venevkqkvd slesykrnee dlgkglsqcf elkenrntlv
      541 fsgvhprsse iqyienvvvp dnsvevseah ilsrgldtst meisggplqt iksnsnetse
      601 qpyfqeernq eatsvfdgkn vdatenvafq aviasiepsk kestvneiqt dinksltnds
      661 qesepkspdp sllnydenlf fdklnhpryq stpgvfesga skplykkddg dsslywrhnl
      721 ksipsapqei vikplslspe lksssslsek slrqavglgk trstlfqygi dneqflpigk
      781 iksvsaldla eklgssniiy pmkvwtsdsl vsqdlkqhtf eevadssnci lgknvnssyi
      841 tegpsaavgs sfsanlvacd aksqgalpvi snapliavgq ktllkadtgq geipwplgsk
      901 srftihtimq ndsyfveglq gkaesdictl dddteccsvd enavvcskrq eicdqddltg
      961 ecvevaglen llddleicds slhwqstvql pskedssfed svcpsntdin esfssllprf
     1021 vsheptrdle yhssnlrmlr vspdtvsrtl kpltgdtskg giaeipqstf kpgvttfped
     1081 sdtvsplsls pedfpqlagr spqvkntgey tdtlnqqtla dsrlteetlk isaipgladq
     1141 ktgiaavssg sysqrgkpni fypqalpdsh lteeavkaga vpglgdqktg vsavppssys
     1201 pgeklsvlyp qalpdghqte eslsvsvlpg ladqktgkpi vpassysvge epgifyhqvl
     1261 pdsqlpeeal kvlasprpvd qksglptlss tysygekphi fsqqtlpdsh pteqtlkvsa
     1321 aprlaeqktg vptvtstsyp nkekpsifyq pelpnrhliq evhqvsaapg lveqkagisi
     1381 vpstsyshre kpsvvyqqel pdshliqevq qvsaapglae qktgiptips tsyshrekps
     1441 ivyqqelsds qliersqkvs svpglaeqkt giptipstsy shrekssify qqelpdshlt
     1501 qevqqvsaap glaeqktgip tipstsyshr ekssifyqqe lpdshltqev qqvstavgpl
     1561 eqktgiptvp stsyshrekp lifyqqelpe srlteqaqkv ssvpglteqk tgistvasts
     1621 yshrekpsil yqqelpdihv ihevpqvssv pglaeqkari pvipstsysh rekpsilyqq
     1681 elsdshlteq vqkastapgp aeqktgipvi tsasyshrek piifyqqdlp dshltkeaqk
     1741 vpavsglahq ksgipiappa fysqrgktsl fhqqelpdsh lsdqtqkisa iprpvdqntg
     1801 iqtvpsisys rrekpitfyq relpgrllte evlkvsalpk tadqntgiit gssqsylfge
     1861 kpsglsyqqv lqdgslteea lkvspasrps dqktgilllp assysqrekp gifypqvlps
     1921 shlseetlkd savlgptdqk agtsepsgsy shrekssify qqelpdshit gealkisgvs
     1981 gtgdqktgip ivtspsysqk ekpivvyqpv lpdtylteea vnvsdapaqa dqktgipivt
     2041 spsysynekp iifyqqalpd sqltvealka sdvpgpsdqk tgiptvppss ysyrekpiis
     2101 yqhevpdltq valkvfevpg padqkigipp vtstsysyge kpiisyqqel pdasedalkg
     2161 lgpprqadqt vgvrvlppas yshrespifp yqqelpdlte ealkvfalpa padqnaelpi
     2221 gpsssyshke klkilpddqk talpstpsgs yshrekpkts tvigpadqkt plltgypnsy
     2281 sqrvkpsifl qqqlgdrhqs gdilkispva eptdvnsrip iplsssyshr eksnifypqe
     2341 lpdkhlseds lkvstvpgpa dkktvlpavp pssfshrekp ailyhqdfpe rhltednlkf
     2401 ssslgqadqi nglstdppgt ykhsekhklv sdhvqrltdn ldsshtsvis nsmplksqad
     2461 grvvinkpes sgfedvgsee vrdtessskt lkeiqtllme aenialrryn fpaplvpfrd
     2521 vsfiqskkmv cfkeplttde sdgdlsqrqp fteespsnkc iqkdistqtn lkcqrgienw
     2581 efissttvrs plqeaegkar aafdetlkqy kaarsvmrse peeysrtign kivipmmtii
     2641 ksdsssdass cswdsnsles vsdvllnffp ysspktsmtd sreeegmles ddgggssvds
     2701 laahvknllk cesslnhakq ilknaeeees rvrarawnlk fnmaheygys iselneddrr
     2761 kveeikaklf gqgrttdlsk dlqsprgigc kpeavcshiv ieshekgcfr tlpaeqprld
     2821 shpcifrsae pseivrgqrs psswrtrhin lsksldqnns qfkvwnslql qshspfqnfi
     2881 sddleiskgl rmpfhekldp wlselvepar lppeemdchs ssqmlppepm kkfttsitfa
     2941 shrhskcfsd ssflkvgvte gsqcsgpsvg vvnsrfteeq tpprdlkqrt sspsslkvis
     3001 qspdkavtil aenssqsqkl svehsyqeek plersdfkss lpkptasand snfkevhfsd
     3061 nrtlismgrp nstlevkekn vtitadlpsh ifieqevfeq skaphadhhv rkhhspppqh
     3121 qdyvapnlpc hiflekrelf kqskaphvdq lrenhsplpq sqdyiasdlp ssifleqrql
     3181 feqskapdvd hhlrklhspl pqsqdcvvek nnehkpklhi sdvinveakf sdvvspsvps
     3241 qctvvtsast ppsnrkalsc iritlcpktp skldsgnldk ryhsldpatk trmnsefnsd
     3301 lqtissrsle ptsklliskp vaqnqeslgf lgpksssdfq vvqsplpdsn vitqdlktip
     3361 fqnsqivtsr qtqvnssdle eysnpegtpv sadrspeeik tlsspfsgkl ssdavtqitt
     3421 espgkatfss eifvnaedrg heipelntqk sgnvpvkfas sssvqqitvp hgtdgqalll
     3481 pykpsgsskm yyvpqltqip ssvdsksdtt iesshsgsnd aiapdfpaqv lgtrdddlad
     3541 tvnikhkegi yskravtkas lsmgkkpfqk dnagsstaaa sqhstqlqda kaikqkeevh
     3601 skrkvpkeaw seekkslqid iaesrchsef entthsvfrs akfyfhhpvh lssdqdfche
     3661 slgrsvfmrh swkdffqhhp dkqreytclp spcqnmektk tdytriesls inlnlenkel
     3721 khatksqard fpksdkqind vkrdpkatae ltaehtvtln elwnryqerq kqqkpqfsak
     3781 kelslverld rlakllqhpi thslqpsest qddsrgeqdv kewsdkqqqq rnklqkkkry
     3841 kslekchkht gdlkskilst hqagranqik ieqfkfdkyi lrkqpgfhyi nntssdsrhs
     3901 edselltdta tnilstttsp vesdiltqtd kevtlherss sistidtarl ihafghervc
     3961 lsprriklys svtdhqrryl ekrskknkka lntgypqits ehtrrkhiqv adhvssdsvs
     4021 sstssfwssn stlcnkqnah mlnkgvqagn leivngvren trdvgmtfpt psssearvee
     4081 dsdvtswsee kieekrllts ylgdkklkkn kksccegvsw fvpvenmksg pkkenmpklh
     4141 gpgiswfapi tntkpwrepl reqnwqgqhm drhsslagpg kdplkpfvra tlqeslqlhr
     4201 pdfisrsger ikrlklivqe rklqnmlqse rdalfntvqe wqgyrdpvhl lrkrgflaaq
     4261 kkrpigkkem iqrskriyeq lpevqkkree ekrrseyksy rlraqlykkk vtnqllgrkv
     4321 pwd
//
LOCUS       XP_061011705            4312 aa            linear   MAM 02-DEC-2023
DEFINITION  centrosome-associated protein ALMS1 isoform X7 [Dama dama].
ACCESSION   XP_061011705
VERSION     XP_061011705.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155722.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4312
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..4312
                     /product="centrosome-associated protein ALMS1 isoform X7"
                     /calculated_mol_wt=479599
     Region          1116..1162
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1164..1209
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1211..1256
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1258..1302
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1303..1349
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1350..1396
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1397..1443
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1444..1490
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1491..1537
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1538..1584
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1585..1631
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1632..1678
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1679..1725
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1726..1772
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1773..1819
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1820..1863
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1868..1914
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1916..1960
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1961..2007
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2008..2054
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2055..2101
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2102..2146
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2147..2191
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2192..2234
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          <2258..2289
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2291..2337
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2339..2384
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2386..2431
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          4176..4308
                     /region_name="ALMS_motif"
                     /note="ALMS motif; pfam15309"
                     /db_xref="CDD:464634"
     CDS             1..4312
                     /gene="ALMS1"
                     /coded_by="XM_061155722.1:7..12945"
                     /db_xref="GeneID:133065059"
ORIGIN      
        1 mepedlpwpg eleeeeeeea enldedevvm veemeeeerr epeadfnyes qrrestdded
       61 deeakawlqa hpgatlpqas lprhrysese ltspgkvvpl tchlwqqply qndsgtqisd
      121 tnvaslenia lwgsgddqrt eswhclpqem dssytlntaq tgfnvrekgt evtdfaslee
      181 giltqsenqg kdpnrdllcs pllvlqdnfa spdlplltcl terqefgpds lfhqselefa
      241 plrgipgkse dtewfsrpse vsealfqaas gvasdlvnsc fsvsqhpltg stavksqhsl
      301 ltpeqgtkee tissntlddl ktckdsgnyd avysymswet qevmqepetn ladkdqvsfs
      361 tasdvsdeyi npkgsdsfdv sylyaqygnq gtlqqsekyl askdhdsysd ssdtvdrnki
      421 pkesdnfsfs nmppskqgas hhpeiclisk dhvsfpheva phfnnktphs fwhcllgsgg
      481 sevpsmsdsh yfesvclrap venevkqkvd slesykrnee dlgkglsqcf elkenrntlv
      541 fsgvhprsse iqyienvvvp dnsvevseah ilsrgldtst meisggplqt iksnsnetse
      601 qpyfqeernq eatsvfdgkn vdatenvafq aviasiepsk kestvneiqt dinksltnds
      661 qesepkspdp sllnydenlf fdklnhpryq stpgvfesga skplykkddg dsslywrhnl
      721 ksipsapqei vikplslspe lksssslsek slrqavglgk trstlfqygi dneqflpigk
      781 iksvsaldla eklgssniiy pmkvwtsdsl vsqdlkqhtf eevadssnci lgknvnssyi
      841 tegpsaavgs sfsanlvacd aksqgalpvi snapliavgq ktllkadtgq geipwplgsk
      901 srftihtimq ndsyfveglq gkaesdictl dddteccsvd enavvcskrq eicdqddltg
      961 ecvevaglen llddleicds slhwqstvql pskedssfed svcpsntdin esfssllprf
     1021 vsheptrdle yhssnlrmlr vspdtvsrtl kpltgdtskg giaeipqstf kpgvttfped
     1081 sdtvsplsls pedfpqlagr spqvkntgey tdtlnqqtla dsrlteetlk isaipgladq
     1141 ktgiaavssg sysqrgkpni fypqalpdsh lteeavkaga vpglgdqktg vsavppssys
     1201 pgeklsvlyp qalpdghqte eslsvsvlpg ladqktgkpi vpassysvge epgifyhqvl
     1261 pdsqlpeeal kvlasprpvd qksglptlss tysygekphi fsqqtlpdsh pteqtlkvsa
     1321 aprlaeqktg vptvtstsyp nkekpsifyq pelpnrhliq evhqvsaapg lveqkagisi
     1381 vpstsyshre kpsvvyqqel pdshliqevq qvsaapglae qktgiptips tsyshrekps
     1441 ivyqqelsds qliersqkvs svpglaeqkt giptipstsy shrekssify qqelpdshlt
     1501 qevqqvsaap glaeqktgip tipstsyshr ekssifyqqe lpdshltqev qqvstavgpl
     1561 eqktgiptvp stsyshrekp lifyqqelpe srlteqaqkv ssvpglteqk tgistvasts
     1621 yshrekpsil yqqelpdihv ihevpqvssv pglaeqkari pvipstsysh rekpsilyqq
     1681 elsdshlteq vqkastapgp aeqktgipvi tsasyshrek piifyqqdlp dshltkeaqk
     1741 vpavsglahq ksgipiappa fysqrgktsl fhqqelpdsh lsdqtqkisa iprpvdqntg
     1801 iqtvpsisys rrekpitfyq relpgrllte evlkvsalpk tadqntgiit gssqsylfge
     1861 kpsglsyqqv lqdgslteea lkvspasrps dqktgilllp assysqrekp gifypqvlps
     1921 shlseetlkd savlgptdqk agtsepsgsy shrekssify qqelpdshit gealkisgvs
     1981 gtgdqktgip ivtspsysqk ekpivvyqpv lpdtylteea vnvsdapaqa dqktgipivt
     2041 spsysynekp iifyqqalpd sqltvealka sdvpgpsdqk tgiptvppss ysyrekpiis
     2101 yqhevpdltq valkvfevpg padqkigipp vtstsysyge kpiisyqqel pdasedalkg
     2161 lgpprqadqt vgvrvlppas yshrespifp yqqelpdlte ealkvfalpa padqnaelpi
     2221 gpsssyshke klkilpddqk talpstpsgs yshrekpkts tvigpadqkt plltgypnsy
     2281 sqrvkpsifl qqqlgdrhqs gdilkispva eptdvnsrip iplsssyshr eksnifypqe
     2341 lpdkhlseds lkvstvpgpa dkktvlpavp pssfshrekp ailyhqdfpe rhltednlkf
     2401 ssslgqadqi nglstdppgt ykhsekhklv sdhvqrltdn ldsshtsvis nsmplksqad
     2461 grvvinkpes sgfedvgsee vrdtessskt lkeiqtllme aenialrryn fpaplvpfrd
     2521 vsfiqskkmv cfkeplttde sdgdlsqrqp fteespsnkc iqkdistqtn lkcqrgienw
     2581 efissttvrs plqeaegkar aafdetlkqy kaarsvmrse peeysrtign kivipmmtii
     2641 ksdsssdass cswdsnsles vsdvllnffp ysspktsmtd sreeegmles ddgggssvds
     2701 laahvknllk cesslnhakq ilknaeeees rvrarawnlk fnmaheygys iselneddrr
     2761 kveeikaklf gqgrttdlsk dlqsprgigc kpeavcshiv ieshekgcfr tlpaeqprld
     2821 shpcifrsae pseivrgqrs psswrtrhin lsksldqnns qfkvwnslql qshspfqnfi
     2881 sddleiskgl rmpfhekldp wlselvepar lppeemdchs ssqmlppepm kkfttsitfa
     2941 shrhskcfsd ssflkvgvte gsqcsgpsvg vvnsrfteeq tpprdlkqrt sspsslkvis
     3001 qspdkavtil aenssqsqkl svehsyqeek plersdfkss lpkptasand snfkevhfsd
     3061 nrtlismgrp nstlevkekn vtitadlpsh ifieqevfeq skaphadhhv rkhhspppqh
     3121 qdyvapnlpc hiflekrelf kqskaphvdq lrenhsplpq sqdyiasdlp ssifleqrql
     3181 feqskapdvd hhlrklhspl pqsqdcvvek nnehkpklhi sdvinveakf sdvvspsvps
     3241 qctvvtsast ppsnrkalsc iritlcpktp skldsgnldk ryhsldpatk trmnsefnsd
     3301 lqtissrsle ptsklliskp vaqnqeslgf lgpksssdfq vvqsplpdsn vitqdlktip
     3361 fqnsqivtsr qtqvnssdle eysnpegtpv sadrspeeik tlsspfsgkl ssdavtqitt
     3421 espgkatfss eifvnaedrg heipelntqk sgnvpvkfas sssvqqitvp hgtdgqalll
     3481 pykpsgsskm yyvpqltqip ssvdsksdtt iesshsdaqv qvlitgdedl sdknqekeiy
     3541 tkkavtktag seekeslqkd stgsstaaas qhstqlqdak aikqkeevhs krkvpkeaws
     3601 eekkslqidi aesrchsefe ntthsvfrsa kfyfhhpvhl ssdqdfches lgrsvfmrhs
     3661 wkdffqhhpd kqreytclps pcqnmektkt dytrieslsi nlnlenkelk hatksqardf
     3721 pksdkqindv krdpkatael taehtvtlne lwnryqerqk qqkpqfsakk elslverldr
     3781 lakllqhpit hslqpsestq ddsrgeqdvk ewsdkqqqqr nklqkkkryk slekchkhtg
     3841 dlkskilsth qagranqiki eqfkfdkyil rkqpgfhyin ntssdsrhse dselltdtat
     3901 nilstttspv esdiltqtdk evtlhersss istidtarli hafghervcl sprriklyss
     3961 vtdhqrryle krskknkkal ntgypqitse htrrkhiqva dhvssdsvss stssfwssns
     4021 tlcnkqnahm lnkgvqagnl eivngvrent rdvgmtfptp sssearveed sdvtswseek
     4081 ieekrlltsy lgdkklkknk ksccegvswf vpvenmksgp kkenmpklhg pgiswfapit
     4141 ntkpwreplr eqnwqgqhmd rhsslagpgk dplkpfvrat lqeslqlhrp dfisrsgeri
     4201 krlklivqer klqnmlqser dalfntvqew qgyrdpvhll rkrgflaaqk krpigkkemi
     4261 qrskriyeql pevqkkreee krrseyksyr lraqlykkkv tnqllgrkvp wd
//
LOCUS       XP_061011706            4284 aa            linear   MAM 02-DEC-2023
DEFINITION  centrosome-associated protein ALMS1 isoform X8 [Dama dama].
ACCESSION   XP_061011706
VERSION     XP_061011706.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155723.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4284
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..4284
                     /product="centrosome-associated protein ALMS1 isoform X8"
                     /calculated_mol_wt=476906
     Region          1031..1077
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1079..1124
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1126..1171
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1173..1217
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1218..1264
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1265..1311
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1312..1358
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1359..1405
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1406..1452
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1453..1499
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1500..1546
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1547..1593
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1594..1640
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1641..1687
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1688..1734
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1735..1778
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1783..1829
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1831..1875
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1876..1922
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1923..1969
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1970..2016
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2017..2061
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2062..2106
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2107..2149
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          <2173..2204
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2206..2252
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2254..2299
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2301..2346
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          4148..4280
                     /region_name="ALMS_motif"
                     /note="ALMS motif; pfam15309"
                     /db_xref="CDD:464634"
     CDS             1..4284
                     /gene="ALMS1"
                     /coded_by="XM_061155723.1:7..12861"
                     /db_xref="GeneID:133065059"
ORIGIN      
        1 mepedlpwpg eleeeeeeea enldedevvm veemeeeerr epeadfnyes qrrestdded
       61 deeakawlqa hpgatlpqas lprhrysese ltspgkvvpl tchlwqqply qndsgtqisd
      121 tnvaslenia lwgsgddqrt eswhclpqem dssytlntaq tgfnvrekgt evtdfaslee
      181 giltqsenqg kdpnrdllcs pllvlqdnfa spdlplltcl terqefgpds lfhqselefa
      241 plrgipgkse dtewfsrpse vsealfqaas gvasdlvnsc fsvsqhpltg stavksqhsl
      301 ltpeqgtkee tissntlddl ktckdsgnyd avysymswet qevmqepetn ladkdqvsfs
      361 tasdvsdeyi npkgsdsfdv sylyaqygnq gtlqqsekyl askdhdsysd ssdtvdrnki
      421 pkesdnfsfs nmppskqgas hhpeiclisk dhvsfpheva phfnnktphs fwhcllgsgg
      481 sevpsmsdsh yfesvclrap venevkqkvd slesykrnee dlgkglsqcf elkenrntlv
      541 fsgvhprsse iqyienvvvp dnsvevseah ilsrgldtst meisggplqt iksnsnetse
      601 qpyfqeernq eatsvfdgkn vdatenvafq aviasiepsk kestvneiqt dinksltnds
      661 qesepkspdp sllnydenlf fdklnhpryq stpgvfesga skplykkddg dsslywrhnl
      721 ksipsapqei vikplslspe lksssslsek slrqavglgk trstlfqygi dneqflpigk
      781 iksvsaldla eklgssniiy pmkvwtsdsl vsqdlkqhtf eevadssnci leglqgkaes
      841 dictldddte ccsvdenavv cskrqeicdq ddltgecvev aglenllddl eicdsslhwq
      901 stvqlpsked ssfedsvcps ntdinesfss llprfvshep trdleyhssn lrmlrvspdt
      961 vsrtlkpltg dtskggiaei pqstfkpgvt tfpedsdtvs plslspedfp qlagrspqvk
     1021 ntgeytdtln qqtladsrlt eetlkisaip gladqktgia avssgsysqr gkpnifypqa
     1081 lpdshlteea vkagavpglg dqktgvsavp pssyspgekl svlypqalpd ghqteeslsv
     1141 svlpgladqk tgkpivpass ysvgeepgif yhqvlpdsql peealkvlas prpvdqksgl
     1201 ptlsstysyg ekphifsqqt lpdshpteqt lkvsaaprla eqktgvptvt stsypnkekp
     1261 sifyqpelpn rhliqevhqv saapglveqk agisivpsts yshrekpsvv yqqelpdshl
     1321 iqevqqvsaa pglaeqktgi ptipstsysh rekpsivyqq elsdsqlier sqkvssvpgl
     1381 aeqktgipti pstsyshrek ssifyqqelp dshltqevqq vsaapglaeq ktgiptipst
     1441 syshrekssi fyqqelpdsh ltqevqqvst avgpleqktg iptvpstsys hrekplifyq
     1501 qelpesrlte qaqkvssvpg lteqktgist vastsyshre kpsilyqqel pdihvihevp
     1561 qvssvpglae qkaripvips tsyshrekps ilyqqelsds hlteqvqkas tapgpaeqkt
     1621 gipvitsasy shrekpiify qqdlpdshlt keaqkvpavs glahqksgip iappafysqr
     1681 gktslfhqqe lpdshlsdqt qkisaiprpv dqntgiqtvp sisysrrekp itfyqrelpg
     1741 rllteevlkv salpktadqn tgiitgssqs ylfgekpsgl syqqvlqdgs lteealkvsp
     1801 asrpsdqktg illlpassys qrekpgifyp qvlpsshlse etlkdsavlg ptdqkagtse
     1861 psgsyshrek ssifyqqelp dshitgealk isgvsgtgdq ktgipivtsp sysqkekpiv
     1921 vyqpvlpdty lteeavnvsd apaqadqktg ipivtspsys ynekpiifyq qalpdsqltv
     1981 ealkasdvpg psdqktgipt vppssysyre kpiisyqhev pdltqvalkv fevpgpadqk
     2041 igippvtsts ysygekpiis yqqelpdase dalkglgppr qadqtvgvrv lppasyshre
     2101 spifpyqqel pdlteealkv falpapadqn aelpigpsss yshkeklkil pddqktalps
     2161 tpsgsyshre kpktstvigp adqktplltg ypnsysqrvk psiflqqqlg drhqsgdilk
     2221 ispvaeptdv nsripiplss syshreksni fypqelpdkh lsedslkvst vpgpadkktv
     2281 lpavppssfs hrekpailyh qdfperhlte dnlkfssslg qadqinglst dppgtykhse
     2341 khklvsdhvq rltdnldssh tsvisnsmpl ksqadgrvvi nkpessgfed vgseevrdte
     2401 sssktlkeiq tllmeaenia lrrynfpapl vpfrdvsfiq skkmvcfkep lttdesdgdl
     2461 sqrqpftees psnkciqkdi stqtnlkcqr gienwefiss ttvrsplqea egkaraafde
     2521 tlkqykaars vmrsepeeys rtignkivip mmtiiksdss sdasscswds nslesvsdvl
     2581 lnffpysspk tsmtdsreee gmlesddggg ssvdslaahv knllkcessl nhakqilkna
     2641 eeeesrvrar awnlkfnmah eygysiseln eddrrkveei kaklfgqgrt tdlskdlqsp
     2701 rgigckpeav cshivieshe kgcfrtlpae qprldshpci frsaepseiv rgqrspsswr
     2761 trhinlsksl dqnnsqfkvw nslqlqshsp fqnfisddle iskglrmpfh ekldpwlsel
     2821 veparlppee mdchsssqml ppepmkkftt sitfashrhs kcfsdssflk vgvtegsqcs
     2881 gpsvgvvnsr fteeqtpprd lkqrtsspss lkvisqspdk avtilaenss qsqklsvehs
     2941 yqeekplers dfksslpkpt asandsnfke vhfsdnrtli smgrpnstle vkeknvtita
     3001 dlpshifieq evfeqskaph adhhvrkhhs pppqhqdyva pnlpchifle krelfkqska
     3061 phvdqlrenh splpqsqdyi asdlpssifl eqrqlfeqsk apdvdhhlrk lhsplpqsqd
     3121 cvveknnehk pklhisdvin veakfsdvvs psvpsqctvv tsastppsnr kalsciritl
     3181 cpktpsklds gnldkryhsl dpatktrmns efnsdlqtis srsleptskl liskpvaqnq
     3241 eslgflgpks ssdfqvvqsp lpdsnvitqd lktipfqnsq ivtsrqtqvn ssdleeysnp
     3301 egtpvsadrs peeiktlssp fsgklssdav tqittespgk atfsseifvn aedrgheipe
     3361 lntqksgnvp vkfassssvq qitvphgtdg qalllpykps gsskmyyvpq ltqipssvds
     3421 ksdttiessh sgsndaiapd fpaqvlgtrd ddladtvnik hkegiyskra vtkaslsmgk
     3481 kpfqkdnada qvqvlitgde dlsdknqeke iytkkavtkt agseekeslq kdstgsstaa
     3541 asqhstqlqd akaikqkeev hskrkvpkea wseekkslqi diaesrchse fentthsvfr
     3601 sakfyfhhpv hlssdqdfch eslgrsvfmr hswkdffqhh pdkqreytcl pspcqnmekt
     3661 ktdytriesl sinlnlenke lkhatksqar dfpksdkqin dvkrdpkata eltaehtvtl
     3721 nelwnryqer qkqqkpqfsa kkelslverl drlakllqhp ithslqpses tqddsrgeqd
     3781 vkewsdkqqq qrnklqkkkr ykslekchkh tgdlkskils thqagranqi kieqfkfdky
     3841 ilrkqpgfhy inntssdsrh sedselltdt atnilsttts pvesdiltqt dkevtlhers
     3901 ssistidtar lihafgherv clsprrikly ssvtdhqrry lekrskknkk alntgypqit
     3961 sehtrrkhiq vadhvssdsv ssstssfwss nstlcnkqna hmlnkgvqag nleivngvre
     4021 ntrdvgmtfp tpsssearve edsdvtswse ekieekrllt sylgdkklkk nkksccegvs
     4081 wfvpvenmks gpkkenmpkl hgpgiswfap itntkpwrep lreqnwqgqh mdrhsslagp
     4141 gkdplkpfvr atlqeslqlh rpdfisrsge rikrlklivq erklqnmlqs erdalfntvq
     4201 ewqgyrdpvh llrkrgflaa qkkrpigkke miqrskriye qlpevqkkre eekrrseyks
     4261 yrlraqlykk kvtnqllgrk vpwd
//
LOCUS       XP_061011707            4266 aa            linear   MAM 02-DEC-2023
DEFINITION  centrosome-associated protein ALMS1 isoform X9 [Dama dama].
ACCESSION   XP_061011707
VERSION     XP_061011707.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155724.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4266
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..4266
                     /product="centrosome-associated protein ALMS1 isoform X9"
                     /calculated_mol_wt=474517
     Region          1116..1162
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1164..1209
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1211..1256
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1258..1302
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1303..1349
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1350..1396
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1397..1443
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1444..1490
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1491..1537
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1538..1584
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1585..1631
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1632..1678
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1679..1725
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1726..1772
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1773..1819
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1820..1863
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1868..1914
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1916..1960
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1961..2007
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2008..2054
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2055..2101
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2102..2146
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2147..2191
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2192..2234
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          <2258..2289
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2291..2337
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2339..2384
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          2386..2431
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          4130..4262
                     /region_name="ALMS_motif"
                     /note="ALMS motif; pfam15309"
                     /db_xref="CDD:464634"
     CDS             1..4266
                     /gene="ALMS1"
                     /coded_by="XM_061155724.1:7..12807"
                     /db_xref="GeneID:133065059"
ORIGIN      
        1 mepedlpwpg eleeeeeeea enldedevvm veemeeeerr epeadfnyes qrrestdded
       61 deeakawlqa hpgatlpqas lprhrysese ltspgkvvpl tchlwqqply qndsgtqisd
      121 tnvaslenia lwgsgddqrt eswhclpqem dssytlntaq tgfnvrekgt evtdfaslee
      181 giltqsenqg kdpnrdllcs pllvlqdnfa spdlplltcl terqefgpds lfhqselefa
      241 plrgipgkse dtewfsrpse vsealfqaas gvasdlvnsc fsvsqhpltg stavksqhsl
      301 ltpeqgtkee tissntlddl ktckdsgnyd avysymswet qevmqepetn ladkdqvsfs
      361 tasdvsdeyi npkgsdsfdv sylyaqygnq gtlqqsekyl askdhdsysd ssdtvdrnki
      421 pkesdnfsfs nmppskqgas hhpeiclisk dhvsfpheva phfnnktphs fwhcllgsgg
      481 sevpsmsdsh yfesvclrap venevkqkvd slesykrnee dlgkglsqcf elkenrntlv
      541 fsgvhprsse iqyienvvvp dnsvevseah ilsrgldtst meisggplqt iksnsnetse
      601 qpyfqeernq eatsvfdgkn vdatenvafq aviasiepsk kestvneiqt dinksltnds
      661 qesepkspdp sllnydenlf fdklnhpryq stpgvfesga skplykkddg dsslywrhnl
      721 ksipsapqei vikplslspe lksssslsek slrqavglgk trstlfqygi dneqflpigk
      781 iksvsaldla eklgssniiy pmkvwtsdsl vsqdlkqhtf eevadssnci lgknvnssyi
      841 tegpsaavgs sfsanlvacd aksqgalpvi snapliavgq ktllkadtgq geipwplgsk
      901 srftihtimq ndsyfveglq gkaesdictl dddteccsvd enavvcskrq eicdqddltg
      961 ecvevaglen llddleicds slhwqstvql pskedssfed svcpsntdin esfssllprf
     1021 vsheptrdle yhssnlrmlr vspdtvsrtl kpltgdtskg giaeipqstf kpgvttfped
     1081 sdtvsplsls pedfpqlagr spqvkntgey tdtlnqqtla dsrlteetlk isaipgladq
     1141 ktgiaavssg sysqrgkpni fypqalpdsh lteeavkaga vpglgdqktg vsavppssys
     1201 pgeklsvlyp qalpdghqte eslsvsvlpg ladqktgkpi vpassysvge epgifyhqvl
     1261 pdsqlpeeal kvlasprpvd qksglptlss tysygekphi fsqqtlpdsh pteqtlkvsa
     1321 aprlaeqktg vptvtstsyp nkekpsifyq pelpnrhliq evhqvsaapg lveqkagisi
     1381 vpstsyshre kpsvvyqqel pdshliqevq qvsaapglae qktgiptips tsyshrekps
     1441 ivyqqelsds qliersqkvs svpglaeqkt giptipstsy shrekssify qqelpdshlt
     1501 qevqqvsaap glaeqktgip tipstsyshr ekssifyqqe lpdshltqev qqvstavgpl
     1561 eqktgiptvp stsyshrekp lifyqqelpe srlteqaqkv ssvpglteqk tgistvasts
     1621 yshrekpsil yqqelpdihv ihevpqvssv pglaeqkari pvipstsysh rekpsilyqq
     1681 elsdshlteq vqkastapgp aeqktgipvi tsasyshrek piifyqqdlp dshltkeaqk
     1741 vpavsglahq ksgipiappa fysqrgktsl fhqqelpdsh lsdqtqkisa iprpvdqntg
     1801 iqtvpsisys rrekpitfyq relpgrllte evlkvsalpk tadqntgiit gssqsylfge
     1861 kpsglsyqqv lqdgslteea lkvspasrps dqktgilllp assysqrekp gifypqvlps
     1921 shlseetlkd savlgptdqk agtsepsgsy shrekssify qqelpdshit gealkisgvs
     1981 gtgdqktgip ivtspsysqk ekpivvyqpv lpdtylteea vnvsdapaqa dqktgipivt
     2041 spsysynekp iifyqqalpd sqltvealka sdvpgpsdqk tgiptvppss ysyrekpiis
     2101 yqhevpdltq valkvfevpg padqkigipp vtstsysyge kpiisyqqel pdasedalkg
     2161 lgpprqadqt vgvrvlppas yshrespifp yqqelpdlte ealkvfalpa padqnaelpi
     2221 gpsssyshke klkilpddqk talpstpsgs yshrekpkts tvigpadqkt plltgypnsy
     2281 sqrvkpsifl qqqlgdrhqs gdilkispva eptdvnsrip iplsssyshr eksnifypqe
     2341 lpdkhlseds lkvstvpgpa dkktvlpavp pssfshrekp ailyhqdfpe rhltednlkf
     2401 ssslgqadqi nglstdppgt ykhsekhklv sdhvqrltdn ldsshtsvis nsmplksqad
     2461 grvvinkpes sgfedvgsee vrdtessskt lkeiqtllme aenialrryn fpaplvpfrd
     2521 vsfiqskkmv cfkeplttde sdgdlsqrqp fteespsnkc iqkdistqtn lkcqrgienw
     2581 efissttvrs plqeaegkar aafdetlkqy kaarsvmrse peeysrtign kivipmmtii
     2641 ksdsssdass cswdsnsles vsdvllnffp ysspktsmtd sreeegmles ddgggssvds
     2701 laahvknllk cesslnhakq ilknaeeees rvrarawnlk fnmaheygys iselneddrr
     2761 kveeikaklf gqgrttdlsk dlqsprgigc kpeavcshiv ieshekgcfr tlpaeqprld
     2821 shpcifrsae pseivrgqrs psswrtrhin lsksldqnns qfkvwnslql qshspfqnfi
     2881 sddleiskgl rmpfhekldp wlselvepar lppeemdchs ssqmlppepm kkfttsitfa
     2941 shrhskcfsd ssflkvgvte gsqcsgpsvg vvnsrfteeq tpprdlkqrt sspsslkvis
     3001 qspdkavtil aenssqsqkl svehsyqeek plersdfkss lpkptasand snfkevhfsd
     3061 nrtlismgrp nstlevkekn vtitadlpsh ifieqevfeq skaphadhhv rkhhspppqh
     3121 qdyvapnlpc hiflekrelf kqskaphvdq lrenhsplpq sqdyiasdlp ssifleqrql
     3181 feqskapdvd hhlrklhspl pqsqdcvvek nnehkpklhi sdvinveakf sdvvspsvps
     3241 qctvvtsast ppsnrkalsc iritlcpktp skldsgnldk ryhsldpatk trmnsefnsd
     3301 lqtissrsle ptsklliskp vaqnqeslgf lgpksssdfq vvqsplpdsn vitqdlktip
     3361 fqnsqivtsr qtqvnssdle eysnpegtpv sadrspeeik tlsspfsgkl ssdavtqitt
     3421 espgkatfss eifvnaedrg heipelntqk sgnvpvkfas sssvqqitvp hgtdgqalll
     3481 pykpsgsskm yyvpqltqip ssvdsksdtt iesshsgsst aaasqhstql qdakaikqke
     3541 evhskrkvpk eawseekksl qidiaesrch sefentthsv frsakfyfhh pvhlssdqdf
     3601 cheslgrsvf mrhswkdffq hhpdkqreyt clpspcqnme ktktdytrie slsinlnlen
     3661 kelkhatksq ardfpksdkq indvkrdpka taeltaehtv tlnelwnryq erqkqqkpqf
     3721 sakkelslve rldrlakllq hpithslqps estqddsrge qdvkewsdkq qqqrnklqkk
     3781 krykslekch khtgdlkski lsthqagran qikieqfkfd kyilrkqpgf hyinntssds
     3841 rhsedsellt dtatnilstt tspvesdilt qtdkevtlhe rsssistidt arlihafghe
     3901 rvclsprrik lyssvtdhqr rylekrskkn kkalntgypq itsehtrrkh iqvadhvssd
     3961 svssstssfw ssnstlcnkq nahmlnkgvq agnleivngv rentrdvgmt fptpsssear
     4021 veedsdvtsw seekieekrl ltsylgdkkl kknkkscceg vswfvpvenm ksgpkkenmp
     4081 klhgpgiswf apitntkpwr eplreqnwqg qhmdrhssla gpgkdplkpf vratlqeslq
     4141 lhrpdfisrs gerikrlkli vqerklqnml qserdalfnt vqewqgyrdp vhllrkrgfl
     4201 aaqkkrpigk kemiqrskri yeqlpevqkk reeekrrsey ksyrlraqly kkkvtnqllg
     4261 rkvpwd
//
LOCUS       XP_061011708            3905 aa            linear   MAM 02-DEC-2023
DEFINITION  centrosome-associated protein ALMS1 isoform X10 [Dama dama].
ACCESSION   XP_061011708
VERSION     XP_061011708.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155725.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3905
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3905
                     /product="centrosome-associated protein ALMS1 isoform X10"
                     /calculated_mol_wt=434034
     Region          652..698
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          700..745
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          747..792
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          794..838
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          839..885
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          886..932
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          933..979
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          980..1026
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1027..1073
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1074..1120
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1121..1167
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1168..1214
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1215..1261
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1262..1308
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1309..1355
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1356..1399
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1404..1450
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1452..1496
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1497..1543
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1544..1590
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1591..1637
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1638..1682
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1683..1727
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1728..1770
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          <1794..1825
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1827..1873
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1875..1920
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1922..1967
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          3769..3901
                     /region_name="ALMS_motif"
                     /note="ALMS motif; pfam15309"
                     /db_xref="CDD:464634"
     CDS             1..3905
                     /gene="ALMS1"
                     /coded_by="XM_061155725.1:7..11724"
                     /db_xref="GeneID:133065059"
ORIGIN      
        1 mepedlpwpg eleeeeeeea enldedevvm veemeeeerr epeadfnyes qrrestdded
       61 deeakawlqa hpgatlpqas lprhrysese ltspgkvvpl tchlwqqply qndsgtqisd
      121 tnvaslenia lwgsgddqrt eswhclpqem dssytlntaq tgfnvrekgt evtdfaslee
      181 giltqsenqg kdpnrdllcs pllvlqdnfa spdlplltcl terqefgpds lfhqselefa
      241 plrgipgkse dtewfsrpse vsealfqaas gvasdlvnsc fsvsqhpltg stavksqhsl
      301 ltpeqgtkee tissntlddl ktckdseklg ssniiypmkv wtsdslvsqd lkqhtfeeva
      361 dssncilgkn vnssyitegp saavgssfsa nlvacdaksq galpvisnap liavgqktll
      421 kadtgqgeip wplgsksrft ihtimqndsy fveglqgkae sdictldddt eccsvdenav
      481 vcskrqeicd qddltgecve vaglenlldd leicdsslhw qstvqlpske dssfedsvcp
      541 sntdinesfs sllprfvshe ptrdleyhss nlrmlrvspd tvsrtlkplt gdtskggiae
      601 ipqstfkpgv ttfpedsdtv splslspedf pqlagrspqv kntgeytdtl nqqtladsrl
      661 teetlkisai pgladqktgi aavssgsysq rgkpnifypq alpdshltee avkagavpgl
      721 gdqktgvsav ppssyspgek lsvlypqalp dghqteesls vsvlpgladq ktgkpivpas
      781 sysvgeepgi fyhqvlpdsq lpeealkvla sprpvdqksg lptlsstysy gekphifsqq
      841 tlpdshpteq tlkvsaaprl aeqktgvptv tstsypnkek psifyqpelp nrhliqevhq
      901 vsaapglveq kagisivpst syshrekpsv vyqqelpdsh liqevqqvsa apglaeqktg
      961 iptipstsys hrekpsivyq qelsdsqlie rsqkvssvpg laeqktgipt ipstsyshre
     1021 kssifyqqel pdshltqevq qvsaapglae qktgiptips tsyshrekss ifyqqelpds
     1081 hltqevqqvs tavgpleqkt giptvpstsy shrekplify qqelpesrlt eqaqkvssvp
     1141 glteqktgis tvastsyshr ekpsilyqqe lpdihvihev pqvssvpgla eqkaripvip
     1201 stsyshrekp silyqqelsd shlteqvqka stapgpaeqk tgipvitsas yshrekpiif
     1261 yqqdlpdshl tkeaqkvpav sglahqksgi piappafysq rgktslfhqq elpdshlsdq
     1321 tqkisaiprp vdqntgiqtv psisysrrek pitfyqrelp grllteevlk vsalpktadq
     1381 ntgiitgssq sylfgekpsg lsyqqvlqdg slteealkvs pasrpsdqkt gilllpassy
     1441 sqrekpgify pqvlpsshls eetlkdsavl gptdqkagts epsgsyshre kssifyqqel
     1501 pdshitgeal kisgvsgtgd qktgipivts psysqkekpi vvyqpvlpdt ylteeavnvs
     1561 dapaqadqkt gipivtspsy synekpiify qqalpdsqlt vealkasdvp gpsdqktgip
     1621 tvppssysyr ekpiisyqhe vpdltqvalk vfevpgpadq kigippvtst sysygekpii
     1681 syqqelpdas edalkglgpp rqadqtvgvr vlppasyshr espifpyqqe lpdlteealk
     1741 vfalpapadq naelpigpss syshkeklki lpddqktalp stpsgsyshr ekpktstvig
     1801 padqktpllt gypnsysqrv kpsiflqqql gdrhqsgdil kispvaeptd vnsripipls
     1861 ssyshreksn ifypqelpdk hlsedslkvs tvpgpadkkt vlpavppssf shrekpaily
     1921 hqdfperhlt ednlkfsssl gqadqingls tdppgtykhs ekhklvsdhv qrltdnldss
     1981 htsvisnsmp lksqadgrvv inkpessgfe dvgseevrdt esssktlkei qtllmeaeni
     2041 alrrynfpap lvpfrdvsfi qskkmvcfke plttdesdgd lsqrqpftee spsnkciqkd
     2101 istqtnlkcq rgienwefis sttvrsplqe aegkaraafd etlkqykaar svmrsepeey
     2161 srtignkivi pmmtiiksds ssdasscswd snslesvsdv llnffpyssp ktsmtdsree
     2221 egmlesddgg gssvdslaah vknllkcess lnhakqilkn aeeeesrvra rawnlkfnma
     2281 heygysisel neddrrkvee ikaklfgqgr ttdlskdlqs prgigckpea vcshiviesh
     2341 ekgcfrtlpa eqprldshpc ifrsaepsei vrgqrspssw rtrhinlsks ldqnnsqfkv
     2401 wnslqlqshs pfqnfisddl eiskglrmpf hekldpwlse lveparlppe emdchsssqm
     2461 lppepmkkft tsitfashrh skcfsdssfl kvgvtegsqc sgpsvgvvns rfteeqtppr
     2521 dlkqrtssps slkvisqspd kavtilaens sqsqklsveh syqeekpler sdfksslpkp
     2581 tasandsnfk evhfsdnrtl ismgrpnstl evkeknvtit adlpshifie qevfeqskap
     2641 hadhhvrkhh spppqhqdyv apnlpchifl ekrelfkqsk aphvdqlren hsplpqsqdy
     2701 iasdlpssif leqrqlfeqs kapdvdhhlr klhsplpqsq dcvveknneh kpklhisdvi
     2761 nveakfsdvv spsvpsqctv vtsastppsn rkalscirit lcpktpskld sgnldkryhs
     2821 ldpatktrmn sefnsdlqti ssrsleptsk lliskpvaqn qeslgflgpk sssdfqvvqs
     2881 plpdsnvitq dlktipfqns qivtsrqtqv nssdleeysn pegtpvsadr speeiktlss
     2941 pfsgklssda vtqittespg katfsseifv naedrgheip elntqksgnv pvkfassssv
     3001 qqitvphgtd gqalllpykp sgsskmyyvp qltqipssvd sksdttiess hsgsndaiap
     3061 dfpaqvlgtr dddladtvni khkegiyskr avtkaslsmg kkpfqkdnad aqvqvlitgd
     3121 edlsdknqek eiytkkavtk tagseekesl qkdstgssta aasqhstqlq dakaikqkee
     3181 vhskrkvpke awseekkslq idiaesrchs efentthsvf rsakfyfhhp vhlssdqdfc
     3241 heslgrsvfm rhswkdffqh hpdkqreytc lpspcqnmek tktdytries lsinlnlenk
     3301 elkhatksqa rdfpksdkqi ndvkrdpkat aeltaehtvt lnelwnryqe rqkqqkpqfs
     3361 akkelslver ldrlakllqh pithslqpse stqddsrgeq dvkewsdkqq qqrnklqkkk
     3421 rykslekchk htgdlkskil sthqagranq ikieqfkfdk yilrkqpgfh yinntssdsr
     3481 hsedselltd tatnilsttt spvesdiltq tdkevtlher sssistidta rlihafgher
     3541 vclsprrikl yssvtdhqrr ylekrskknk kalntgypqi tsehtrrkhi qvadhvssds
     3601 vssstssfws snstlcnkqn ahmlnkgvqa gnleivngvr entrdvgmtf ptpsssearv
     3661 eedsdvtsws eekieekrll tsylgdkklk knkksccegv swfvpvenmk sgpkkenmpk
     3721 lhgpgiswfa pitntkpwre plreqnwqgq hmdrhsslag pgkdplkpfv ratlqeslql
     3781 hrpdfisrsg erikrlkliv qerklqnmlq serdalfntv qewqgyrdpv hllrkrgfla
     3841 aqkkrpigkk emiqrskriy eqlpevqkkr eeekrrseyk syrlraqlyk kkvtnqllgr
     3901 kvpwd
//
LOCUS       XP_061011709            3779 aa            linear   MAM 02-DEC-2023
DEFINITION  centrosome-associated protein ALMS1 isoform X11 [Dama dama].
ACCESSION   XP_061011709
VERSION     XP_061011709.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155726.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3779
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3779
                     /product="centrosome-associated protein ALMS1 isoform X11"
                     /calculated_mol_wt=420631
     Region          526..572
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          574..619
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          621..666
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          668..712
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          713..759
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          760..806
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          807..853
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          854..900
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          901..947
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          948..994
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          995..1041
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1042..1088
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1089..1135
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1136..1182
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1183..1229
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1230..1273
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1278..1324
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1326..1370
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1371..1417
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1418..1464
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1465..1511
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1512..1556
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1557..1601
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1602..1644
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          <1668..1699
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1701..1747
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1749..1794
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1796..1841
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          3643..3775
                     /region_name="ALMS_motif"
                     /note="ALMS motif; pfam15309"
                     /db_xref="CDD:464634"
     CDS             1..3779
                     /gene="ALMS1"
                     /coded_by="XM_061155726.1:7..11346"
                     /db_xref="GeneID:133065059"
ORIGIN      
        1 mepedlpwpg eleeeeeeea enldedevvm veemeeeerr epeadfnyes qrrestdded
       61 deeakawlqa hpgatlpqas lprhrysese ltspgkvvpl tchlwqqply qndsgtqisd
      121 tnvaslenia lwgsgddqrt eswhclpqem dssytlntaq tgfnvrekgt evtdfaslee
      181 giltqsenqg kdpnrdllcs pllvlqdnfa spdlplltcl terqefgpds lfhqselefa
      241 plrgipgkse dtewfsrpse vsealfqaas gvasdlvnsc fsvsqhpltg stavksqhsl
      301 ltpeqgtkee tissntlddl ktckdseglq gkaesdictl dddteccsvd enavvcskrq
      361 eicdqddltg ecvevaglen llddleicds slhwqstvql pskedssfed svcpsntdin
      421 esfssllprf vsheptrdle yhssnlrmlr vspdtvsrtl kpltgdtskg giaeipqstf
      481 kpgvttfped sdtvsplsls pedfpqlagr spqvkntgey tdtlnqqtla dsrlteetlk
      541 isaipgladq ktgiaavssg sysqrgkpni fypqalpdsh lteeavkaga vpglgdqktg
      601 vsavppssys pgeklsvlyp qalpdghqte eslsvsvlpg ladqktgkpi vpassysvge
      661 epgifyhqvl pdsqlpeeal kvlasprpvd qksglptlss tysygekphi fsqqtlpdsh
      721 pteqtlkvsa aprlaeqktg vptvtstsyp nkekpsifyq pelpnrhliq evhqvsaapg
      781 lveqkagisi vpstsyshre kpsvvyqqel pdshliqevq qvsaapglae qktgiptips
      841 tsyshrekps ivyqqelsds qliersqkvs svpglaeqkt giptipstsy shrekssify
      901 qqelpdshlt qevqqvsaap glaeqktgip tipstsyshr ekssifyqqe lpdshltqev
      961 qqvstavgpl eqktgiptvp stsyshrekp lifyqqelpe srlteqaqkv ssvpglteqk
     1021 tgistvasts yshrekpsil yqqelpdihv ihevpqvssv pglaeqkari pvipstsysh
     1081 rekpsilyqq elsdshlteq vqkastapgp aeqktgipvi tsasyshrek piifyqqdlp
     1141 dshltkeaqk vpavsglahq ksgipiappa fysqrgktsl fhqqelpdsh lsdqtqkisa
     1201 iprpvdqntg iqtvpsisys rrekpitfyq relpgrllte evlkvsalpk tadqntgiit
     1261 gssqsylfge kpsglsyqqv lqdgslteea lkvspasrps dqktgilllp assysqrekp
     1321 gifypqvlps shlseetlkd savlgptdqk agtsepsgsy shrekssify qqelpdshit
     1381 gealkisgvs gtgdqktgip ivtspsysqk ekpivvyqpv lpdtylteea vnvsdapaqa
     1441 dqktgipivt spsysynekp iifyqqalpd sqltvealka sdvpgpsdqk tgiptvppss
     1501 ysyrekpiis yqhevpdltq valkvfevpg padqkigipp vtstsysyge kpiisyqqel
     1561 pdasedalkg lgpprqadqt vgvrvlppas yshrespifp yqqelpdlte ealkvfalpa
     1621 padqnaelpi gpsssyshke klkilpddqk talpstpsgs yshrekpkts tvigpadqkt
     1681 plltgypnsy sqrvkpsifl qqqlgdrhqs gdilkispva eptdvnsrip iplsssyshr
     1741 eksnifypqe lpdkhlseds lkvstvpgpa dkktvlpavp pssfshrekp ailyhqdfpe
     1801 rhltednlkf ssslgqadqi nglstdppgt ykhsekhklv sdhvqrltdn ldsshtsvis
     1861 nsmplksqad grvvinkpes sgfedvgsee vrdtessskt lkeiqtllme aenialrryn
     1921 fpaplvpfrd vsfiqskkmv cfkeplttde sdgdlsqrqp fteespsnkc iqkdistqtn
     1981 lkcqrgienw efissttvrs plqeaegkar aafdetlkqy kaarsvmrse peeysrtign
     2041 kivipmmtii ksdsssdass cswdsnsles vsdvllnffp ysspktsmtd sreeegmles
     2101 ddgggssvds laahvknllk cesslnhakq ilknaeeees rvrarawnlk fnmaheygys
     2161 iselneddrr kveeikaklf gqgrttdlsk dlqsprgigc kpeavcshiv ieshekgcfr
     2221 tlpaeqprld shpcifrsae pseivrgqrs psswrtrhin lsksldqnns qfkvwnslql
     2281 qshspfqnfi sddleiskgl rmpfhekldp wlselvepar lppeemdchs ssqmlppepm
     2341 kkfttsitfa shrhskcfsd ssflkvgvte gsqcsgpsvg vvnsrfteeq tpprdlkqrt
     2401 sspsslkvis qspdkavtil aenssqsqkl svehsyqeek plersdfkss lpkptasand
     2461 snfkevhfsd nrtlismgrp nstlevkekn vtitadlpsh ifieqevfeq skaphadhhv
     2521 rkhhspppqh qdyvapnlpc hiflekrelf kqskaphvdq lrenhsplpq sqdyiasdlp
     2581 ssifleqrql feqskapdvd hhlrklhspl pqsqdcvvek nnehkpklhi sdvinveakf
     2641 sdvvspsvps qctvvtsast ppsnrkalsc iritlcpktp skldsgnldk ryhsldpatk
     2701 trmnsefnsd lqtissrsle ptsklliskp vaqnqeslgf lgpksssdfq vvqsplpdsn
     2761 vitqdlktip fqnsqivtsr qtqvnssdle eysnpegtpv sadrspeeik tlsspfsgkl
     2821 ssdavtqitt espgkatfss eifvnaedrg heipelntqk sgnvpvkfas sssvqqitvp
     2881 hgtdgqalll pykpsgsskm yyvpqltqip ssvdsksdtt iesshsgsnd aiapdfpaqv
     2941 lgtrdddlad tvnikhkegi yskravtkas lsmgkkpfqk dnadaqvqvl itgdedlsdk
     3001 nqekeiytkk avtktagsee keslqkdstg sstaaasqhs tqlqdakaik qkeevhskrk
     3061 vpkeawseek kslqidiaes rchsefentt hsvfrsakfy fhhpvhlssd qdfcheslgr
     3121 svfmrhswkd ffqhhpdkqr eytclpspcq nmektktdyt rieslsinln lenkelkhat
     3181 ksqardfpks dkqindvkrd pkataeltae htvtlnelwn ryqerqkqqk pqfsakkels
     3241 lverldrlak llqhpithsl qpsestqdds rgeqdvkews dkqqqqrnkl qkkkryksle
     3301 kchkhtgdlk skilsthqag ranqikieqf kfdkyilrkq pgfhyinnts sdsrhsedse
     3361 lltdtatnil stttspvesd iltqtdkevt lhersssist idtarlihaf ghervclspr
     3421 riklyssvtd hqrrylekrs kknkkalntg ypqitsehtr rkhiqvadhv ssdsvsssts
     3481 sfwssnstlc nkqnahmlnk gvqagnleiv ngvrentrdv gmtfptpsss earveedsdv
     3541 tswseekiee krlltsylgd kklkknkksc cegvswfvpv enmksgpkke nmpklhgpgi
     3601 swfapitntk pwreplreqn wqgqhmdrhs slagpgkdpl kpfvratlqe slqlhrpdfi
     3661 srsgerikrl klivqerklq nmlqserdal fntvqewqgy rdpvhllrkr gflaaqkkrp
     3721 igkkemiqrs kriyeqlpev qkkreeekrr seyksyrlra qlykkkvtnq llgrkvpwd
//
LOCUS       XP_061011710            3681 aa            linear   MAM 02-DEC-2023
DEFINITION  centrosome-associated protein ALMS1 isoform X12 [Dama dama].
ACCESSION   XP_061011710
VERSION     XP_061011710.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155727.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3681
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3681
                     /product="centrosome-associated protein ALMS1 isoform X12"
                     /calculated_mol_wt=410172
     Region          428..474
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          476..521
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          523..568
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          570..614
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          615..661
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          662..708
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          709..755
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          756..802
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          803..849
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          850..896
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          897..943
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          944..990
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          991..1037
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1038..1084
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1085..1131
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1132..1175
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1180..1226
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1228..1272
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1273..1319
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1320..1366
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1367..1413
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1414..1458
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1459..1503
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1504..1546
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          <1570..1601
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1603..1649
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1651..1696
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          1698..1743
                     /region_name="ALMS_repeat"
                     /note="Alstrom syndrome repeat; pfam18727"
                     /db_xref="CDD:376150"
     Region          3545..3677
                     /region_name="ALMS_motif"
                     /note="ALMS motif; pfam15309"
                     /db_xref="CDD:464634"
     CDS             1..3681
                     /gene="ALMS1"
                     /coded_by="XM_061155727.1:7..11052"
                     /db_xref="GeneID:133065059"
ORIGIN      
        1 mepedlpwpg eleeeeeeea enldedevvm veemeeeerr epeadfnyes qrrestdded
       61 deeakawlqa hpgatlpqas lprhrysese ltspgkvvpl tchlwqqply qndsgtqisd
      121 tnvaslenia lwgsgddqrt eswhclpqem dssytlntaq tgfnvrekgt evtdfaslee
      181 giltqsenqg kdpnrdllcs pllerqefgp dslfhqsele faplrgipeg lqgkaesdic
      241 tldddteccs vdenavvcsk rqeicdqddl tgecvevagl enllddleic dsslhwqstv
      301 qlpskedssf edsvcpsntd inesfssllp rfvsheptrd leyhssnlrm lrvspdtvsr
      361 tlkpltgdts kggiaeipqs tfkpgvttfp edsdtvspls lspedfpqla grspqvkntg
      421 eytdtlnqqt ladsrlteet lkisaipgla dqktgiaavs sgsysqrgkp nifypqalpd
      481 shlteeavka gavpglgdqk tgvsavppss yspgeklsvl ypqalpdghq teeslsvsvl
      541 pgladqktgk pivpassysv geepgifyhq vlpdsqlpee alkvlasprp vdqksglptl
      601 sstysygekp hifsqqtlpd shpteqtlkv saaprlaeqk tgvptvtsts ypnkekpsif
      661 yqpelpnrhl iqevhqvsaa pglveqkagi sivpstsysh rekpsvvyqq elpdshliqe
      721 vqqvsaapgl aeqktgipti pstsyshrek psivyqqels dsqliersqk vssvpglaeq
      781 ktgiptipst syshrekssi fyqqelpdsh ltqevqqvsa apglaeqktg iptipstsys
      841 hrekssifyq qelpdshltq evqqvstavg pleqktgipt vpstsyshre kplifyqqel
      901 pesrlteqaq kvssvpglte qktgistvas tsyshrekps ilyqqelpdi hvihevpqvs
      961 svpglaeqka ripvipstsy shrekpsily qqelsdshlt eqvqkastap gpaeqktgip
     1021 vitsasyshr ekpiifyqqd lpdshltkea qkvpavsgla hqksgipiap pafysqrgkt
     1081 slfhqqelpd shlsdqtqki saiprpvdqn tgiqtvpsis ysrrekpitf yqrelpgrll
     1141 teevlkvsal pktadqntgi itgssqsylf gekpsglsyq qvlqdgslte ealkvspasr
     1201 psdqktgill lpassysqre kpgifypqvl psshlseetl kdsavlgptd qkagtsepsg
     1261 syshrekssi fyqqelpdsh itgealkisg vsgtgdqktg ipivtspsys qkekpivvyq
     1321 pvlpdtylte eavnvsdapa qadqktgipi vtspsysyne kpiifyqqal pdsqltveal
     1381 kasdvpgpsd qktgiptvpp ssysyrekpi isyqhevpdl tqvalkvfev pgpadqkigi
     1441 ppvtstsysy gekpiisyqq elpdasedal kglgpprqad qtvgvrvlpp asyshrespi
     1501 fpyqqelpdl teealkvfal papadqnael pigpsssysh keklkilpdd qktalpstps
     1561 gsyshrekpk tstvigpadq ktplltgypn sysqrvkpsi flqqqlgdrh qsgdilkisp
     1621 vaeptdvnsr ipiplsssys hreksnifyp qelpdkhlse dslkvstvpg padkktvlpa
     1681 vppssfshre kpailyhqdf perhltednl kfssslgqad qinglstdpp gtykhsekhk
     1741 lvsdhvqrlt dnldsshtsv isnsmplksq adgrvvinkp essgfedvgs eevrdtesss
     1801 ktlkeiqtll meaenialrr ynfpaplvpf rdvsfiqskk mvcfkepltt desdgdlsqr
     1861 qpfteespsn kciqkdistq tnlkcqrgie nwefissttv rsplqeaegk araafdetlk
     1921 qykaarsvmr sepeeysrti gnkivipmmt iiksdsssda sscswdsnsl esvsdvllnf
     1981 fpysspktsm tdsreeegml esddgggssv dslaahvknl lkcesslnha kqilknaeee
     2041 esrvrarawn lkfnmaheyg ysiselnedd rrkveeikak lfgqgrttdl skdlqsprgi
     2101 gckpeavcsh ivieshekgc frtlpaeqpr ldshpcifrs aepseivrgq rspsswrtrh
     2161 inlsksldqn nsqfkvwnsl qlqshspfqn fisddleisk glrmpfhekl dpwlselvep
     2221 arlppeemdc hsssqmlppe pmkkfttsit fashrhskcf sdssflkvgv tegsqcsgps
     2281 vgvvnsrfte eqtpprdlkq rtsspsslkv isqspdkavt ilaenssqsq klsvehsyqe
     2341 ekplersdfk sslpkptasa ndsnfkevhf sdnrtlismg rpnstlevke knvtitadlp
     2401 shifieqevf eqskaphadh hvrkhhsppp qhqdyvapnl pchiflekre lfkqskaphv
     2461 dqlrenhspl pqsqdyiasd lpssifleqr qlfeqskapd vdhhlrklhs plpqsqdcvv
     2521 eknnehkpkl hisdvinvea kfsdvvspsv psqctvvtsa stppsnrkal sciritlcpk
     2581 tpskldsgnl dkryhsldpa tktrmnsefn sdlqtissrs leptskllis kpvaqnqesl
     2641 gflgpksssd fqvvqsplpd snvitqdlkt ipfqnsqivt srqtqvnssd leeysnpegt
     2701 pvsadrspee iktlsspfsg klssdavtqi ttespgkatf sseifvnaed rgheipelnt
     2761 qksgnvpvkf assssvqqit vphgtdgqal llpykpsgss kmyyvpqltq ipssvdsksd
     2821 ttiesshsgs ndaiapdfpa qvlgtrdddl adtvnikhke giyskravtk aslsmgkkpf
     2881 qkdnadaqvq vlitgdedls dknqekeiyt kkavtktags eekeslqkds tgsstaaasq
     2941 hstqlqdaka ikqkeevhsk rkvpkeawse ekkslqidia esrchsefen tthsvfrsak
     3001 fyfhhpvhls sdqdfchesl grsvfmrhsw kdffqhhpdk qreytclpsp cqnmektktd
     3061 ytrieslsin lnlenkelkh atksqardfp ksdkqindvk rdpkataelt aehtvtlnel
     3121 wnryqerqkq qkpqfsakke lslverldrl akllqhpith slqpsestqd dsrgeqdvke
     3181 wsdkqqqqrn klqkkkryks lekchkhtgd lkskilsthq agranqikie qfkfdkyilr
     3241 kqpgfhyinn tssdsrhsed selltdtatn ilstttspve sdiltqtdke vtlhersssi
     3301 stidtarlih afghervcls prriklyssv tdhqrrylek rskknkkaln tgypqitseh
     3361 trrkhiqvad hvssdsvsss tssfwssnst lcnkqnahml nkgvqagnle ivngvrentr
     3421 dvgmtfptps ssearveeds dvtswseeki eekrlltsyl gdkklkknkk sccegvswfv
     3481 pvenmksgpk kenmpklhgp giswfapitn tkpwreplre qnwqgqhmdr hsslagpgkd
     3541 plkpfvratl qeslqlhrpd fisrsgerik rlklivqerk lqnmlqserd alfntvqewq
     3601 gyrdpvhllr krgflaaqkk rpigkkemiq rskriyeqlp evqkkreeek rrseyksyrl
     3661 raqlykkkvt nqllgrkvpw d
//
LOCUS       XP_061011711             234 aa            linear   MAM 02-DEC-2023
DEFINITION  N-acetyltransferase 8 [Dama dama].
ACCESSION   XP_061011711
VERSION     XP_061011711.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155728.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..234
                     /product="N-acetyltransferase 8"
                     /calculated_mol_wt=26060
     Region          91..193
                     /region_name="Acetyltransf_1"
                     /note="Acetyltransferase (GNAT) family; pfam00583"
                     /db_xref="CDD:395465"
     Site            order(142..144,154..155)
                     /site_type="other"
                     /note="Coenzyme A binding pocket [chemical binding]"
                     /db_xref="CDD:173926"
     CDS             1..234
                     /gene="NAT8"
                     /coded_by="XM_061155728.1:547..1251"
                     /db_xref="GeneID:133065061"
ORIGIN      
        1 mapyhirkyq endrkrvidl fsmakaehip atfrhilklp qtlvlllggp lavtlvsgsw
       61 vlafvaslal laalrflaky pwkqfvvmsl htdmsditks ylgergsgfw vaeskgqvvg
      121 mvgalpvkqp tlrkeqlell hlcvapehrg hgiakalvrt vltfardqgy gevvlttsml
      181 qhsalalyqr lgfqktsqff llkrwrlisf shiqftyclp saqdsqaleq gggl
//
LOCUS       XP_061011712             175 aa            linear   MAM 02-DEC-2023
DEFINITION  EKC/KEOPS complex subunit TPRKB isoform X1 [Dama dama].
ACCESSION   XP_061011712
VERSION     XP_061011712.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155729.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..175
                     /product="EKC/KEOPS complex subunit TPRKB isoform X1"
                     /calculated_mol_wt=19483
     Region          20..173
                     /region_name="CGI-121"
                     /note="Kinase binding protein CGI-121; pfam08617"
                     /db_xref="CDD:462537"
     CDS             1..175
                     /gene="TPRKB"
                     /coded_by="XM_061155729.1:266..793"
                     /db_xref="GeneID:133065063"
ORIGIN      
        1 mqlthqldlf peyrvtlllf kdvknaadlr kkamegaidg slinptvivd pfqiivaank
       61 avhlyklgkm ktrtlstevi fnlspnnnis ealkkfgisa ndtsvliayi eegekqinqe
      121 ylisqveghq vplknlpeit nitevkkvyk lskqeesigt lldgiicrms tkdvl
//
LOCUS       XP_061011713             175 aa            linear   MAM 02-DEC-2023
DEFINITION  EKC/KEOPS complex subunit TPRKB isoform X1 [Dama dama].
ACCESSION   XP_061011713
VERSION     XP_061011713.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155730.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..175
                     /product="EKC/KEOPS complex subunit TPRKB isoform X1"
                     /calculated_mol_wt=19483
     Region          20..173
                     /region_name="CGI-121"
                     /note="Kinase binding protein CGI-121; pfam08617"
                     /db_xref="CDD:462537"
     CDS             1..175
                     /gene="TPRKB"
                     /coded_by="XM_061155730.1:153..680"
                     /db_xref="GeneID:133065063"
ORIGIN      
        1 mqlthqldlf peyrvtlllf kdvknaadlr kkamegaidg slinptvivd pfqiivaank
       61 avhlyklgkm ktrtlstevi fnlspnnnis ealkkfgisa ndtsvliayi eegekqinqe
      121 ylisqveghq vplknlpeit nitevkkvyk lskqeesigt lldgiicrms tkdvl
//
LOCUS       XP_061011714             175 aa            linear   MAM 02-DEC-2023
DEFINITION  EKC/KEOPS complex subunit TPRKB isoform X1 [Dama dama].
ACCESSION   XP_061011714
VERSION     XP_061011714.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155731.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..175
                     /product="EKC/KEOPS complex subunit TPRKB isoform X1"
                     /calculated_mol_wt=19483
     Region          20..173
                     /region_name="CGI-121"
                     /note="Kinase binding protein CGI-121; pfam08617"
                     /db_xref="CDD:462537"
     CDS             1..175
                     /gene="TPRKB"
                     /coded_by="XM_061155731.1:329..856"
                     /db_xref="GeneID:133065063"
ORIGIN      
        1 mqlthqldlf peyrvtlllf kdvknaadlr kkamegaidg slinptvivd pfqiivaank
       61 avhlyklgkm ktrtlstevi fnlspnnnis ealkkfgisa ndtsvliayi eegekqinqe
      121 ylisqveghq vplknlpeit nitevkkvyk lskqeesigt lldgiicrms tkdvl
//
LOCUS       XP_061011715             175 aa            linear   MAM 02-DEC-2023
DEFINITION  EKC/KEOPS complex subunit TPRKB isoform X1 [Dama dama].
ACCESSION   XP_061011715
VERSION     XP_061011715.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155732.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..175
                     /product="EKC/KEOPS complex subunit TPRKB isoform X1"
                     /calculated_mol_wt=19483
     Region          20..173
                     /region_name="CGI-121"
                     /note="Kinase binding protein CGI-121; pfam08617"
                     /db_xref="CDD:462537"
     CDS             1..175
                     /gene="TPRKB"
                     /coded_by="XM_061155732.1:129..656"
                     /db_xref="GeneID:133065063"
ORIGIN      
        1 mqlthqldlf peyrvtlllf kdvknaadlr kkamegaidg slinptvivd pfqiivaank
       61 avhlyklgkm ktrtlstevi fnlspnnnis ealkkfgisa ndtsvliayi eegekqinqe
      121 ylisqveghq vplknlpeit nitevkkvyk lskqeesigt lldgiicrms tkdvl
//
LOCUS       XP_061011716             175 aa            linear   MAM 02-DEC-2023
DEFINITION  EKC/KEOPS complex subunit TPRKB isoform X1 [Dama dama].
ACCESSION   XP_061011716
VERSION     XP_061011716.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155733.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..175
                     /product="EKC/KEOPS complex subunit TPRKB isoform X1"
                     /calculated_mol_wt=19483
     Region          20..173
                     /region_name="CGI-121"
                     /note="Kinase binding protein CGI-121; pfam08617"
                     /db_xref="CDD:462537"
     CDS             1..175
                     /gene="TPRKB"
                     /coded_by="XM_061155733.1:263..790"
                     /db_xref="GeneID:133065063"
ORIGIN      
        1 mqlthqldlf peyrvtlllf kdvknaadlr kkamegaidg slinptvivd pfqiivaank
       61 avhlyklgkm ktrtlstevi fnlspnnnis ealkkfgisa ndtsvliayi eegekqinqe
      121 ylisqveghq vplknlpeit nitevkkvyk lskqeesigt lldgiicrms tkdvl
//
LOCUS       XP_061011717             175 aa            linear   MAM 02-DEC-2023
DEFINITION  EKC/KEOPS complex subunit TPRKB isoform X1 [Dama dama].
ACCESSION   XP_061011717
VERSION     XP_061011717.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155734.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..175
                     /product="EKC/KEOPS complex subunit TPRKB isoform X1"
                     /calculated_mol_wt=19483
     Region          20..173
                     /region_name="CGI-121"
                     /note="Kinase binding protein CGI-121; pfam08617"
                     /db_xref="CDD:462537"
     CDS             1..175
                     /gene="TPRKB"
                     /coded_by="XM_061155734.1:150..677"
                     /db_xref="GeneID:133065063"
ORIGIN      
        1 mqlthqldlf peyrvtlllf kdvknaadlr kkamegaidg slinptvivd pfqiivaank
       61 avhlyklgkm ktrtlstevi fnlspnnnis ealkkfgisa ndtsvliayi eegekqinqe
      121 ylisqveghq vplknlpeit nitevkkvyk lskqeesigt lldgiicrms tkdvl
//
LOCUS       XP_061011718             175 aa            linear   MAM 02-DEC-2023
DEFINITION  EKC/KEOPS complex subunit TPRKB isoform X1 [Dama dama].
ACCESSION   XP_061011718
VERSION     XP_061011718.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155735.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..175
                     /product="EKC/KEOPS complex subunit TPRKB isoform X1"
                     /calculated_mol_wt=19483
     Region          20..173
                     /region_name="CGI-121"
                     /note="Kinase binding protein CGI-121; pfam08617"
                     /db_xref="CDD:462537"
     CDS             1..175
                     /gene="TPRKB"
                     /coded_by="XM_061155735.1:329..856"
                     /db_xref="GeneID:133065063"
ORIGIN      
        1 mqlthqldlf peyrvtlllf kdvknaadlr kkamegaidg slinptvivd pfqiivaank
       61 avhlyklgkm ktrtlstevi fnlspnnnis ealkkfgisa ndtsvliayi eegekqinqe
      121 ylisqveghq vplknlpeit nitevkkvyk lskqeesigt lldgiicrms tkdvl
//
LOCUS       XP_061011719             175 aa            linear   MAM 02-DEC-2023
DEFINITION  EKC/KEOPS complex subunit TPRKB isoform X1 [Dama dama].
ACCESSION   XP_061011719
VERSION     XP_061011719.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155736.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..175
                     /product="EKC/KEOPS complex subunit TPRKB isoform X1"
                     /calculated_mol_wt=19483
     Region          20..173
                     /region_name="CGI-121"
                     /note="Kinase binding protein CGI-121; pfam08617"
                     /db_xref="CDD:462537"
     CDS             1..175
                     /gene="TPRKB"
                     /coded_by="XM_061155736.1:100..627"
                     /db_xref="GeneID:133065063"
ORIGIN      
        1 mqlthqldlf peyrvtlllf kdvknaadlr kkamegaidg slinptvivd pfqiivaank
       61 avhlyklgkm ktrtlstevi fnlspnnnis ealkkfgisa ndtsvliayi eegekqinqe
      121 ylisqveghq vplknlpeit nitevkkvyk lskqeesigt lldgiicrms tkdvl
//
LOCUS       XP_061011720             175 aa            linear   MAM 02-DEC-2023
DEFINITION  EKC/KEOPS complex subunit TPRKB isoform X1 [Dama dama].
ACCESSION   XP_061011720
VERSION     XP_061011720.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155737.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..175
                     /product="EKC/KEOPS complex subunit TPRKB isoform X1"
                     /calculated_mol_wt=19483
     Region          20..173
                     /region_name="CGI-121"
                     /note="Kinase binding protein CGI-121; pfam08617"
                     /db_xref="CDD:462537"
     CDS             1..175
                     /gene="TPRKB"
                     /coded_by="XM_061155737.1:134..661"
                     /db_xref="GeneID:133065063"
ORIGIN      
        1 mqlthqldlf peyrvtlllf kdvknaadlr kkamegaidg slinptvivd pfqiivaank
       61 avhlyklgkm ktrtlstevi fnlspnnnis ealkkfgisa ndtsvliayi eegekqinqe
      121 ylisqveghq vplknlpeit nitevkkvyk lskqeesigt lldgiicrms tkdvl
//
LOCUS       XP_061011721             142 aa            linear   MAM 02-DEC-2023
DEFINITION  EKC/KEOPS complex subunit TPRKB isoform X2 [Dama dama].
ACCESSION   XP_061011721
VERSION     XP_061011721.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155738.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..142
                     /product="EKC/KEOPS complex subunit TPRKB isoform X2"
                     /calculated_mol_wt=15584
     Region          6..140
                     /region_name="CGI-121"
                     /note="Kinase binding protein CGI-121; pfam08617"
                     /db_xref="CDD:462537"
     CDS             1..142
                     /gene="TPRKB"
                     /coded_by="XM_061155738.1:302..730"
                     /db_xref="GeneID:133065063"
ORIGIN      
        1 megaidgsli nptvivdpfq iivaankavh lyklgkmktr tlstevifnl spnnniseal
       61 kkfgisandt svliayieeg ekqinqeyli sqveghqvpl knlpeitnit evkkvyklsk
      121 qeesigtlld giicrmstkd vl
//
LOCUS       XP_061011722             142 aa            linear   MAM 02-DEC-2023
DEFINITION  EKC/KEOPS complex subunit TPRKB isoform X2 [Dama dama].
ACCESSION   XP_061011722
VERSION     XP_061011722.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155739.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..142
                     /product="EKC/KEOPS complex subunit TPRKB isoform X2"
                     /calculated_mol_wt=15584
     Region          6..140
                     /region_name="CGI-121"
                     /note="Kinase binding protein CGI-121; pfam08617"
                     /db_xref="CDD:462537"
     CDS             1..142
                     /gene="TPRKB"
                     /coded_by="XM_061155739.1:165..593"
                     /db_xref="GeneID:133065063"
ORIGIN      
        1 megaidgsli nptvivdpfq iivaankavh lyklgkmktr tlstevifnl spnnniseal
       61 kkfgisandt svliayieeg ekqinqeyli sqveghqvpl knlpeitnit evkkvyklsk
      121 qeesigtlld giicrmstkd vl
//
LOCUS       XP_061011723             331 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA/RNP complex-1-interacting phosphatase isoform X1 [Dama dama].
ACCESSION   XP_061011723
VERSION     XP_061011723.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155740.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..331
                     /product="RNA/RNP complex-1-interacting phosphatase
                     isoform X1"
                     /calculated_mol_wt=38872
     Region          34..201
                     /region_name="DSP_DUSP11"
                     /note="dual-specificity phosphatase domain of dual
                     specificity protein phosphatase 11 and similar proteins;
                     cd17665"
                     /db_xref="CDD:350503"
     CDS             1..331
                     /gene="DUSP11"
                     /coded_by="XM_061155740.1:136..1131"
                     /db_xref="GeneID:133065066"
ORIGIN      
        1 msqwhhaggh wgqdrvfsgh ssakkkggnh iperwkdylp vgqrmpgtrf iafkvplkks
       61 fekhlapeec fspldlfnki qeqneelgli idltytrryy kpeelpenip ylkiytvghq
      121 vpdddtifkf knavngflkq nkdndrligv hcthglnrtg ylicrylidv egmrpddaie
      181 lfnrcrghcl erqnyiedlr ngpirknwds svsrtrgfed sthmmepvft atksfnrrpk
      241 hnihqtqgyp eprhfhtwtq dlqqserkfs wnqniyqrch vpppgppged yfqrryswnv
      301 kpnasqggpn qrfspgsyyr vpysaycrwa k
//
LOCUS       XP_061011724             287 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA/RNP complex-1-interacting phosphatase isoform X2 [Dama dama].
ACCESSION   XP_061011724
VERSION     XP_061011724.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155741.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..287
                     /product="RNA/RNP complex-1-interacting phosphatase
                     isoform X2"
                     /calculated_mol_wt=33571
     Region          34..157
                     /region_name="PTP_DSP_cys"
                     /note="cys-based protein tyrosine phosphatase and
                     dual-specificity phosphatase superfamily; cl28904"
                     /db_xref="CDD:475123"
     CDS             1..287
                     /gene="DUSP11"
                     /coded_by="XM_061155741.1:137..1000"
                     /db_xref="GeneID:133065066"
ORIGIN      
        1 msqwhhaggh wgqdrvfsgh ssakkkggnh iperwkdylp vgqrmpgtrf iafkvplkke
       61 lpenipylki ytvghqvpdd dtifkfknav ngflkqnkdn drligvhcth glnrtgylic
      121 rylidvegmr pddaielfnr crghclerqn yiedlrngpi rknwdssvsr trgfedsthm
      181 mepvftatks fnrrpkhnih qtqgypeprh fhtwtqdlqq serkfswnqn iyqrchvppp
      241 gppgedyfqr ryswnvkpna sqggpnqrfs pgsyyrvpys aycrwak
//
LOCUS       XP_061011725             423 aa            linear   MAM 02-DEC-2023
DEFINITION  STAM-binding protein [Dama dama].
ACCESSION   XP_061011725
VERSION     XP_061011725.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155742.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..423
                     /product="STAM-binding protein"
                     /calculated_mol_wt=48048
     Region          13..117
                     /region_name="USP8_dimer"
                     /note="USP8 dimerization domain; pfam08969"
                     /db_xref="CDD:462647"
     Region          253..423
                     /region_name="MPN_AMSH_like"
                     /note="Mov34/MPN/PAD-1 family; cd08066"
                     /db_xref="CDD:163697"
     Site            order(279,334,336,344,347)
                     /site_type="active"
                     /note="MPN+ (JAMM) motif [active]"
                     /db_xref="CDD:163697"
     Site            order(281..283,308..312,315..316,319,322,328..329,332,334,
                     336,344,346..347,349..350,353..354,356..357,394)
                     /site_type="other"
                     /note="Distal ubiquitin recognition interface [polypeptide
                     binding]"
                     /db_xref="CDD:163697"
     Site            order(308,336,339..340,342,344..345,394..396)
                     /site_type="active"
                     /note="Proximal ubiquitin recognition interface [active]"
                     /db_xref="CDD:163697"
     Site            order(334,336,347)
                     /site_type="other"
                     /note="Zinc-binding site [ion binding]"
                     /db_xref="CDD:163697"
     CDS             1..423
                     /gene="STAMBP"
                     /coded_by="XM_061155742.1:135..1406"
                     /db_xref="GeneID:133065068"
ORIGIN      
        1 msdhgdvslp pedrvralsq rgstveined ipprryfrsg veiirmasvy ceegnieyaf
       61 ilynkyitlf ieklpkhrdy ksavipekkd tvkklkeiaf pkaeelkael lkrytkeyle
      121 yneekkkeae efarnvamqe elekerqrva qqkqqqleqe qfhafeemir nqelekerlk
      181 ivqefgkvdp glggplvpgl ekpsldvfpt vpvistqpsd cnttvrlakp pvvdrslkpg
      241 alnnleapvi dglrhmvvpg klcpqflqla santargvet cgilcgklmr neftithvli
      301 pkqsagsdyc nteneeelfl iqdqqglitl gwihthptqt aflssvdlht hcsyqmmlpe
      361 siaivcspkf qetgffrltd hgleeisscr qkgfhphskd pplfcscnhv tvvdravtit
      421 dlr
//
LOCUS       XP_061011726             423 aa            linear   MAM 02-DEC-2023
DEFINITION  STAM-binding protein [Dama dama].
ACCESSION   XP_061011726
VERSION     XP_061011726.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155743.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..423
                     /product="STAM-binding protein"
                     /calculated_mol_wt=48048
     Region          13..117
                     /region_name="USP8_dimer"
                     /note="USP8 dimerization domain; pfam08969"
                     /db_xref="CDD:462647"
     Region          253..423
                     /region_name="MPN_AMSH_like"
                     /note="Mov34/MPN/PAD-1 family; cd08066"
                     /db_xref="CDD:163697"
     Site            order(279,334,336,344,347)
                     /site_type="active"
                     /note="MPN+ (JAMM) motif [active]"
                     /db_xref="CDD:163697"
     Site            order(281..283,308..312,315..316,319,322,328..329,332,334,
                     336,344,346..347,349..350,353..354,356..357,394)
                     /site_type="other"
                     /note="Distal ubiquitin recognition interface [polypeptide
                     binding]"
                     /db_xref="CDD:163697"
     Site            order(308,336,339..340,342,344..345,394..396)
                     /site_type="active"
                     /note="Proximal ubiquitin recognition interface [active]"
                     /db_xref="CDD:163697"
     Site            order(334,336,347)
                     /site_type="other"
                     /note="Zinc-binding site [ion binding]"
                     /db_xref="CDD:163697"
     CDS             1..423
                     /gene="STAMBP"
                     /coded_by="XM_061155743.1:71..1342"
                     /db_xref="GeneID:133065068"
ORIGIN      
        1 msdhgdvslp pedrvralsq rgstveined ipprryfrsg veiirmasvy ceegnieyaf
       61 ilynkyitlf ieklpkhrdy ksavipekkd tvkklkeiaf pkaeelkael lkrytkeyle
      121 yneekkkeae efarnvamqe elekerqrva qqkqqqleqe qfhafeemir nqelekerlk
      181 ivqefgkvdp glggplvpgl ekpsldvfpt vpvistqpsd cnttvrlakp pvvdrslkpg
      241 alnnleapvi dglrhmvvpg klcpqflqla santargvet cgilcgklmr neftithvli
      301 pkqsagsdyc nteneeelfl iqdqqglitl gwihthptqt aflssvdlht hcsyqmmlpe
      361 siaivcspkf qetgffrltd hgleeisscr qkgfhphskd pplfcscnhv tvvdravtit
      421 dlr
//
LOCUS       XP_061011727             376 aa            linear   MAM 02-DEC-2023
DEFINITION  actin, gamma-enteric smooth muscle [Dama dama].
ACCESSION   XP_061011727
VERSION     XP_061011727.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155744.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..376
                     /product="actin, gamma-enteric smooth muscle"
                     /calculated_mol_wt=41746
     Region          7..371
                     /region_name="ASKHA_NBD_actin"
                     /note="nucleotide-binding domain (NBD) of actin and
                     similar proteins; cd10224"
                     /db_xref="CDD:466823"
     CDS             1..376
                     /gene="ACTG2"
                     /coded_by="XM_061155744.1:151..1281"
                     /db_xref="GeneID:133065069"
ORIGIN      
        1 mceeettalv cdngsglcka gfagddapra vfpsivgrpr hqgvmvgmgq kdsyvgdeaq
       61 skrgiltlky piehgiitnw ddmekiwhhs fynelrvape ehptllteap lnpkanrekm
      121 tqimfetfnv pamyvaiqav lslyasgrtt givldsgdgv thnvpiyegy alphaimrld
      181 lagrdltdyl mkiltergys fvttaereiv rdikeklcyv aldfenemat aassssleks
      241 yelpdgqvit ignerfrcpe tlfqpsfigm esagihetty nsimkcdidi rkdlyannvl
      301 sggttmypgi adrmqkeita lapstmkiki iapperkysv wiggsilasl stfqqmwisk
      361 peydeagpsi vhrkcf
//
LOCUS       XP_061011728             277 aa            linear   MAM 02-DEC-2023
DEFINITION  deoxyguanosine kinase, mitochondrial isoform X1 [Dama dama].
ACCESSION   XP_061011728
VERSION     XP_061011728.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155745.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..277
                     /product="deoxyguanosine kinase, mitochondrial isoform X1"
                     /calculated_mol_wt=31889
     Region          41..275
                     /region_name="dNK"
                     /note="Deoxynucleoside kinase; pfam01712"
                     /db_xref="CDD:396326"
     Site            order(49,51..52,100,110..111,151,206,211)
                     /site_type="other"
                     /note="Substrate-binding site [chemical binding]"
                     /db_xref="CDD:238836"
     Site            118
                     /site_type="other"
                     /note="Substrate specificity [chemical binding]"
                     /db_xref="CDD:238836"
     CDS             1..277
                     /gene="DGUOK"
                     /coded_by="XM_061155745.1:71..904"
                     /db_xref="GeneID:133065073"
ORIGIN      
        1 mtagrlylrl lrasskfmaq rllegvppsr glhagrgprr lsiegniavg kstfvklltk
       61 typewhtate pvatwqnvqa agsqkagaat rlgnlvdmmy qeparwsytf qtfsllsrlk
      121 vqlepfpekl lelgkavqif ersvysdryi faktlfengs lsdiewhiyq dwhyfllqef
      181 asrlrlhgfi ylqaapqvcl krlhrrarqe ekgvelayle qlhgqheawl vhrttplhse
      241 allnipvlvl dvnddfseev tiqeelmrrv nifvknl
//
LOCUS       XP_061011729             208 aa            linear   MAM 02-DEC-2023
DEFINITION  deoxyguanosine kinase, mitochondrial isoform X2 [Dama dama].
ACCESSION   XP_061011729
VERSION     XP_061011729.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155746.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..208
                     /product="deoxyguanosine kinase, mitochondrial isoform X2"
                     /calculated_mol_wt=23249
     Region          41..206
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Site            order(45,50..53)
                     /site_type="active"
                     /db_xref="CDD:238977"
     CDS             1..208
                     /gene="DGUOK"
                     /coded_by="XM_061155746.1:73..699"
                     /db_xref="GeneID:133065073"
ORIGIN      
        1 mtagrlylrl lrasskfmaq rllegvppsr glhagrgprr lsiegniavg kstfvklltk
       61 typewhtate pvatwqnvqa agsqkagaat rlgnlvdmmy qeparwsytf qtfsllsrlk
      121 vqlepfpekl lelgkavqif ersvysdrsl pagsdymass tsrllprlhs eallnipvlv
      181 ldvnddfsee vtiqeelmrr vnifvknl
//
LOCUS       XP_061011730             180 aa            linear   MAM 02-DEC-2023
DEFINITION  deoxyguanosine kinase, mitochondrial isoform X3 [Dama dama].
ACCESSION   XP_061011730
VERSION     XP_061011730.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155747.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..180
                     /product="deoxyguanosine kinase, mitochondrial isoform X3"
                     /calculated_mol_wt=21407
     Region          1..178
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Site            21
                     /site_type="other"
                     /note="Substrate specificity [chemical binding]"
                     /db_xref="CDD:238836"
     CDS             1..180
                     /gene="DGUOK"
                     /coded_by="XM_061155747.1:177..719"
                     /db_xref="GeneID:133065073"
ORIGIN      
        1 mmyqeparws ytfqtfslls rlkvqlepfp ekllelgkav qifersvysd ryifaktlfe
       61 ngslsdiewh iyqdwhyfll qefasrlrlh gfiylqaapq vclkrlhrra rqeekgvela
      121 yleqlhgqhe awlvhrttpl hseallnipv lvldvnddfs eevtiqeelm rrvnifvknl
//
LOCUS       XP_061011731            1796 aa            linear   MAM 02-DEC-2023
DEFINITION  methylcytosine dioxygenase TET3 isoform X1 [Dama dama].
ACCESSION   XP_061011731
VERSION     XP_061011731.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155748.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1796
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1796
                     /product="methylcytosine dioxygenase TET3 isoform X1"
                     /calculated_mol_wt=192787
     Region          50..89
                     /region_name="zf-CXXC"
                     /note="CXXC zinc finger domain; pfam02008"
                     /db_xref="CDD:366873"
     Region          <301..822
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          824..>1148
                     /region_name="TET3"
                     /note="oxygenase domain of ten-eleven translocation (TET)3
                     methylcytosine dioxygenase and similar proteins; cd18897"
                     /db_xref="CDD:380676"
     Region          <1639..1767
                     /region_name="Tet_JBP"
                     /note="oxygenase domain of ten-eleven translocation (TET)
                     enzymes, J-binding proteins (JBPs), and similar proteins;
                     cl40427"
                     /db_xref="CDD:394797"
     CDS             1..1796
                     /gene="TET3"
                     /coded_by="XM_061155748.1:823..6213"
                     /db_xref="GeneID:133065074"
ORIGIN      
        1 msqfqvplav qpdlpglydf pqgqvmvagy qgpglpvags epqlrgggdg rkkrkrcgtc
       61 epcrrlencg actsctnrrt hqicklrkce vlkkkvgllk eveikagega gpwgqgaavk
      121 tgselspvdg pvpgqmdsgp vyhgdsrqls asgapvngar epagpsllga gspwqadqkp
      181 gwdtapgpah tarledahdl vafsavaeav ssygalstrl yetfnremsr eagnnsrgpr
      241 sgpescsass edldtlqaal alarhgmkpp ncncdgpecp dylewlegki ksvvveggee
      301 rprlpgtlps gdaglpapit gpllnaevpq ippleglpls qsalsiakek nislqtaiai
      361 ealtqlssal pqpshatsqa scplpealsp papfrspqsy lrapswpvgp peehpsfapd
      421 gpafpaatpr tefpeawgtd tppatpqssw pmprpspdpm aeleqllgsa sdyiqsvfkr
      481 pealptkpkv kveapsssps pvlqreaptp ssepdthqka qtalqqhlhh krslfleqah
      541 dasrpppsel papgwwapps spaprpadrp pkekkkkpla laggpvgadr agpgvkpgvr
      601 kpvhikksrp reaqplfppl rqiileglrp pasedvqahp papvpasqgs vvplppepsl
      661 alfapspsgd sllaptqemr spspvaalhp gstgplppad dkleelirqf eaefgdsfgl
      721 pgppsvpiqd penqptclpa pespfatrsp kqikiessga vtvlsttcfh seeggqeatp
      781 pkaenpltpt lsgflesplk yldtptksll dtpakraqae fptcdcveqi vekdegpyyt
      841 hlgsgptvas irelmeeryg ekgkairiek viytgkegks srgcpiakwv irrhtleekl
      901 lclvrhragh hcqnavivil ilawegiprs lgdtlyqelt dtlrkygnpt srrcglnddr
      961 tcacqgkdpn tcgasfsfgc swsmyfngck yarsktprkf rlagdnpkee evlrksfqdl
     1021 atevaplykr lapqayqnqv tneeiaidcr lglkegrpfs gvtacmdfca hahkdqhnly
     1081 ngctvvctlt kednrcvgki pedeqlhvlp lykmastdef gseenqnakv gsgaiqvlta
     1141 fprevrrlpe pakscrqrql earkaaaekk kvqkeklstp ekikqealel agittdpgls
     1201 lkaglsqqsl kpslkvepqn pfssfkyggn tvvesysvlg scrpsdpysv nsvysyhsyy
     1261 aqpglasvng fhskyalpsf syygfpasnp vfpsqflgag awghgggsss fekkpdlhal
     1321 hnslspaygg aefaelpgqa vptdthhpas hhqqpaypvp keyllpkapq ihpvsrdpsp
     1381 faqssncynr sikqepvdpl vhtesvsrep gkmgktplpe asqnggpshl wgqysggpsm
     1441 spkrtnsvgg swgvfppves ptvipdklgs fggacltpsh fsdgqhqwgl fpgegqqpap
     1501 qpggrlrgkp wspckfgsna salagpglte kpwgvgvgdf ssalkggpgf qdklwsplkg
     1561 eegriptpga sqldkawqsf gmplgpsekl fgalkseekl wdpfsleegt aegppnkgpv
     1621 keekgsgggt ggaeeeeelw sdsehnflde niggvavapa hgsiliecar relhattplk
     1681 kpnrchptri slvfyqhknl nqpnhglalw eakmkqlaer ararqeeaar lglghqeakl
     1741 ygkkrkwgga vvpesqhkek kgmvptrqal avptdsavtv ssyaytkvtg pysrwi
//
LOCUS       XP_061011732            1796 aa            linear   MAM 02-DEC-2023
DEFINITION  methylcytosine dioxygenase TET3 isoform X1 [Dama dama].
ACCESSION   XP_061011732
VERSION     XP_061011732.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155749.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1796
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1796
                     /product="methylcytosine dioxygenase TET3 isoform X1"
                     /calculated_mol_wt=192787
     Region          50..89
                     /region_name="zf-CXXC"
                     /note="CXXC zinc finger domain; pfam02008"
                     /db_xref="CDD:366873"
     Region          <301..822
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          824..>1148
                     /region_name="TET3"
                     /note="oxygenase domain of ten-eleven translocation (TET)3
                     methylcytosine dioxygenase and similar proteins; cd18897"
                     /db_xref="CDD:380676"
     Region          <1639..1767
                     /region_name="Tet_JBP"
                     /note="oxygenase domain of ten-eleven translocation (TET)
                     enzymes, J-binding proteins (JBPs), and similar proteins;
                     cl40427"
                     /db_xref="CDD:394797"
     CDS             1..1796
                     /gene="TET3"
                     /coded_by="XM_061155749.1:498..5888"
                     /db_xref="GeneID:133065074"
ORIGIN      
        1 msqfqvplav qpdlpglydf pqgqvmvagy qgpglpvags epqlrgggdg rkkrkrcgtc
       61 epcrrlencg actsctnrrt hqicklrkce vlkkkvgllk eveikagega gpwgqgaavk
      121 tgselspvdg pvpgqmdsgp vyhgdsrqls asgapvngar epagpsllga gspwqadqkp
      181 gwdtapgpah tarledahdl vafsavaeav ssygalstrl yetfnremsr eagnnsrgpr
      241 sgpescsass edldtlqaal alarhgmkpp ncncdgpecp dylewlegki ksvvveggee
      301 rprlpgtlps gdaglpapit gpllnaevpq ippleglpls qsalsiakek nislqtaiai
      361 ealtqlssal pqpshatsqa scplpealsp papfrspqsy lrapswpvgp peehpsfapd
      421 gpafpaatpr tefpeawgtd tppatpqssw pmprpspdpm aeleqllgsa sdyiqsvfkr
      481 pealptkpkv kveapsssps pvlqreaptp ssepdthqka qtalqqhlhh krslfleqah
      541 dasrpppsel papgwwapps spaprpadrp pkekkkkpla laggpvgadr agpgvkpgvr
      601 kpvhikksrp reaqplfppl rqiileglrp pasedvqahp papvpasqgs vvplppepsl
      661 alfapspsgd sllaptqemr spspvaalhp gstgplppad dkleelirqf eaefgdsfgl
      721 pgppsvpiqd penqptclpa pespfatrsp kqikiessga vtvlsttcfh seeggqeatp
      781 pkaenpltpt lsgflesplk yldtptksll dtpakraqae fptcdcveqi vekdegpyyt
      841 hlgsgptvas irelmeeryg ekgkairiek viytgkegks srgcpiakwv irrhtleekl
      901 lclvrhragh hcqnavivil ilawegiprs lgdtlyqelt dtlrkygnpt srrcglnddr
      961 tcacqgkdpn tcgasfsfgc swsmyfngck yarsktprkf rlagdnpkee evlrksfqdl
     1021 atevaplykr lapqayqnqv tneeiaidcr lglkegrpfs gvtacmdfca hahkdqhnly
     1081 ngctvvctlt kednrcvgki pedeqlhvlp lykmastdef gseenqnakv gsgaiqvlta
     1141 fprevrrlpe pakscrqrql earkaaaekk kvqkeklstp ekikqealel agittdpgls
     1201 lkaglsqqsl kpslkvepqn pfssfkyggn tvvesysvlg scrpsdpysv nsvysyhsyy
     1261 aqpglasvng fhskyalpsf syygfpasnp vfpsqflgag awghgggsss fekkpdlhal
     1321 hnslspaygg aefaelpgqa vptdthhpas hhqqpaypvp keyllpkapq ihpvsrdpsp
     1381 faqssncynr sikqepvdpl vhtesvsrep gkmgktplpe asqnggpshl wgqysggpsm
     1441 spkrtnsvgg swgvfppves ptvipdklgs fggacltpsh fsdgqhqwgl fpgegqqpap
     1501 qpggrlrgkp wspckfgsna salagpglte kpwgvgvgdf ssalkggpgf qdklwsplkg
     1561 eegriptpga sqldkawqsf gmplgpsekl fgalkseekl wdpfsleegt aegppnkgpv
     1621 keekgsgggt ggaeeeeelw sdsehnflde niggvavapa hgsiliecar relhattplk
     1681 kpnrchptri slvfyqhknl nqpnhglalw eakmkqlaer ararqeeaar lglghqeakl
     1741 ygkkrkwgga vvpesqhkek kgmvptrqal avptdsavtv ssyaytkvtg pysrwi
//
LOCUS       XP_061011733            1722 aa            linear   MAM 02-DEC-2023
DEFINITION  methylcytosine dioxygenase TET3 isoform X2 [Dama dama].
ACCESSION   XP_061011733
VERSION     XP_061011733.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155750.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1722
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1722
                     /product="methylcytosine dioxygenase TET3 isoform X2"
                     /calculated_mol_wt=184585
     Region          <227..748
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          750..>1074
                     /region_name="TET3"
                     /note="oxygenase domain of ten-eleven translocation (TET)3
                     methylcytosine dioxygenase and similar proteins; cd18897"
                     /db_xref="CDD:380676"
     Region          <1565..1693
                     /region_name="Tet_JBP"
                     /note="oxygenase domain of ten-eleven translocation (TET)
                     enzymes, J-binding proteins (JBPs), and similar proteins;
                     cl40427"
                     /db_xref="CDD:394797"
     CDS             1..1722
                     /gene="TET3"
                     /coded_by="XM_061155750.1:314..5482"
                     /db_xref="GeneID:133065074"
ORIGIN      
        1 mvkslvfsag qpglesqscc flavspwvei kagegagpwg qgaavktgse lspvdgpvpg
       61 qmdsgpvyhg dsrqlsasga pvngarepag psllgagspw qadqkpgwdt apgpahtarl
      121 edahdlvafs avaeavssyg alstrlyetf nremsreagn nsrgprsgpe scsassedld
      181 tlqaalalar hgmkppncnc dgpecpdyle wlegkiksvv veggeerprl pgtlpsgdag
      241 lpapitgpll naevpqippl eglplsqsal siakeknisl qtaiaiealt qlssalpqps
      301 hatsqascpl pealsppapf rspqsylrap swpvgppeeh psfapdgpaf paatprtefp
      361 eawgtdtppa tpqsswpmpr pspdpmaele qllgsasdyi qsvfkrpeal ptkpkvkvea
      421 pssspspvlq reaptpssep dthqkaqtal qqhlhhkrsl fleqahdasr pppselpapg
      481 wwappsspap rpadrppkek kkkplalagg pvgadragpg vkpgvrkpvh ikksrpreaq
      541 plfpplrqii leglrppase dvqahppapv pasqgsvvpl ppepslalfa pspsgdslla
      601 ptqemrspsp vaalhpgstg plppaddkle elirqfeaef gdsfglpgpp svpiqdpenq
      661 ptclpapesp fatrspkqik iessgavtvl sttcfhseeg gqeatppkae npltptlsgf
      721 lesplkyldt ptkslldtpa kraqaefptc dcveqivekd egpyythlgs gptvasirel
      781 meerygekgk airiekviyt gkegkssrgc piakwvirrh tleekllclv rhraghhcqn
      841 avivililaw egiprslgdt lyqeltdtlr kygnptsrrc glnddrtcac qgkdpntcga
      901 sfsfgcswsm yfngckyars ktprkfrlag dnpkeeevlr ksfqdlatev aplykrlapq
      961 ayqnqvtnee iaidcrlglk egrpfsgvta cmdfcahahk dqhnlyngct vvctltkedn
     1021 rcvgkipede qlhvlplykm astdefgsee nqnakvgsga iqvltafpre vrrlpepaks
     1081 crqrqleark aaaekkkvqk eklstpekik qealelagit tdpglslkag lsqqslkpsl
     1141 kvepqnpfss fkyggntvve sysvlgscrp sdpysvnsvy syhsyyaqpg lasvngfhsk
     1201 yalpsfsyyg fpasnpvfps qflgagawgh gggsssfekk pdlhalhnsl spayggaefa
     1261 elpgqavptd thhpashhqq paypvpkeyl lpkapqihpv srdpspfaqs sncynrsikq
     1321 epvdplvhte svsrepgkmg ktplpeasqn ggpshlwgqy sggpsmspkr tnsvggswgv
     1381 fppvesptvi pdklgsfgga cltpshfsdg qhqwglfpge gqqpapqpgg rlrgkpwspc
     1441 kfgsnasala gpgltekpwg vgvgdfssal kggpgfqdkl wsplkgeegr iptpgasqld
     1501 kawqsfgmpl gpseklfgal kseeklwdpf sleegtaegp pnkgpvkeek gsgggtggae
     1561 eeeelwsdse hnfldenigg vavapahgsi liecarrelh attplkkpnr chptrislvf
     1621 yqhknlnqpn hglalweakm kqlaerarar qeeaarlglg hqeaklygkk rkwggavvpe
     1681 sqhkekkgmv ptrqalavpt dsavtvssya ytkvtgpysr wi
//
LOCUS       XP_061011734            1715 aa            linear   MAM 02-DEC-2023
DEFINITION  methylcytosine dioxygenase TET3 isoform X3 [Dama dama].
ACCESSION   XP_061011734
VERSION     XP_061011734.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155751.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1715
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1715
                     /product="methylcytosine dioxygenase TET3 isoform X3"
                     /calculated_mol_wt=183852
     Region          <220..741
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          743..>1067
                     /region_name="TET3"
                     /note="oxygenase domain of ten-eleven translocation (TET)3
                     methylcytosine dioxygenase and similar proteins; cd18897"
                     /db_xref="CDD:380676"
     Region          <1558..1686
                     /region_name="Tet_JBP"
                     /note="oxygenase domain of ten-eleven translocation (TET)
                     enzymes, J-binding proteins (JBPs), and similar proteins;
                     cl40427"
                     /db_xref="CDD:394797"
     CDS             1..1715
                     /gene="TET3"
                     /coded_by="XM_061155751.1:153..5300"
                     /db_xref="GeneID:133065074"
ORIGIN      
        1 mfttlptadn latrggcqnq veikagegag pwgqgaavkt gselspvdgp vpgqmdsgpv
       61 yhgdsrqlsa sgapvngare pagpsllgag spwqadqkpg wdtapgpaht arledahdlv
      121 afsavaeavs sygalstrly etfnremsre agnnsrgprs gpescsasse dldtlqaala
      181 larhgmkppn cncdgpecpd ylewlegkik svvveggeer prlpgtlpsg daglpapitg
      241 pllnaevpqi ppleglplsq salsiakekn islqtaiaie altqlssalp qpshatsqas
      301 cplpealspp apfrspqsyl rapswpvgpp eehpsfapdg pafpaatprt efpeawgtdt
      361 ppatpqsswp mprpspdpma eleqllgsas dyiqsvfkrp ealptkpkvk veapssspsp
      421 vlqreaptps sepdthqkaq talqqhlhhk rslfleqahd asrpppselp apgwwappss
      481 paprpadrpp kekkkkplal aggpvgadra gpgvkpgvrk pvhikksrpr eaqplfpplr
      541 qiileglrpp asedvqahpp apvpasqgsv vplppepsla lfapspsgds llaptqemrs
      601 pspvaalhpg stgplppadd kleelirqfe aefgdsfglp gppsvpiqdp enqptclpap
      661 espfatrspk qikiessgav tvlsttcfhs eeggqeatpp kaenpltptl sgflesplky
      721 ldtptkslld tpakraqaef ptcdcveqiv ekdegpyyth lgsgptvasi relmeeryge
      781 kgkairiekv iytgkegkss rgcpiakwvi rrhtleekll clvrhraghh cqnavivili
      841 lawegiprsl gdtlyqeltd tlrkygnpts rrcglnddrt cacqgkdpnt cgasfsfgcs
      901 wsmyfngcky arsktprkfr lagdnpkeee vlrksfqdla tevaplykrl apqayqnqvt
      961 neeiaidcrl glkegrpfsg vtacmdfcah ahkdqhnlyn gctvvctltk ednrcvgkip
     1021 edeqlhvlpl ykmastdefg seenqnakvg sgaiqvltaf prevrrlpep akscrqrqle
     1081 arkaaaekkk vqkeklstpe kikqealela gittdpglsl kaglsqqslk pslkvepqnp
     1141 fssfkyggnt vvesysvlgs crpsdpysvn svysyhsyya qpglasvngf hskyalpsfs
     1201 yygfpasnpv fpsqflgaga wghgggsssf ekkpdlhalh nslspaygga efaelpgqav
     1261 ptdthhpash hqqpaypvpk eyllpkapqi hpvsrdpspf aqssncynrs ikqepvdplv
     1321 htesvsrepg kmgktplpea sqnggpshlw gqysggpsms pkrtnsvggs wgvfppvesp
     1381 tvipdklgsf ggacltpshf sdgqhqwglf pgegqqpapq pggrlrgkpw spckfgsnas
     1441 alagpgltek pwgvgvgdfs salkggpgfq dklwsplkge egriptpgas qldkawqsfg
     1501 mplgpseklf galkseeklw dpfsleegta egppnkgpvk eekgsgggtg gaeeeeelws
     1561 dsehnflden iggvavapah gsiliecarr elhattplkk pnrchptris lvfyqhknln
     1621 qpnhglalwe akmkqlaera rarqeeaarl glghqeakly gkkrkwggav vpesqhkekk
     1681 gmvptrqala vptdsavtvs syaytkvtgp ysrwi
//
LOCUS       XP_061011735            1703 aa            linear   MAM 02-DEC-2023
DEFINITION  methylcytosine dioxygenase TET3 isoform X4 [Dama dama].
ACCESSION   XP_061011735
VERSION     XP_061011735.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155752.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1703
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1703
                     /product="methylcytosine dioxygenase TET3 isoform X4"
                     /calculated_mol_wt=182737
     Region          <208..729
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          731..>1055
                     /region_name="TET3"
                     /note="oxygenase domain of ten-eleven translocation (TET)3
                     methylcytosine dioxygenase and similar proteins; cd18897"
                     /db_xref="CDD:380676"
     Region          <1546..1674
                     /region_name="Tet_JBP"
                     /note="oxygenase domain of ten-eleven translocation (TET)
                     enzymes, J-binding proteins (JBPs), and similar proteins;
                     cl40427"
                     /db_xref="CDD:394797"
     CDS             1..1703
                     /gene="TET3"
                     /coded_by="XM_061155752.1:105..5216"
                     /db_xref="GeneID:133065074"
ORIGIN      
        1 mhqrrpaeve ikagegagpw gqgaavktgs elspvdgpvp gqmdsgpvyh gdsrqlsasg
       61 apvngarepa gpsllgagsp wqadqkpgwd tapgpahtar ledahdlvaf savaeavssy
      121 galstrlyet fnremsreag nnsrgprsgp escsassedl dtlqaalala rhgmkppncn
      181 cdgpecpdyl ewlegkiksv vveggeerpr lpgtlpsgda glpapitgpl lnaevpqipp
      241 leglplsqsa lsiakeknis lqtaiaieal tqlssalpqp shatsqascp lpealsppap
      301 frspqsylra pswpvgppee hpsfapdgpa fpaatprtef peawgtdtpp atpqsswpmp
      361 rpspdpmael eqllgsasdy iqsvfkrpea lptkpkvkve apssspspvl qreaptpsse
      421 pdthqkaqta lqqhlhhkrs lfleqahdas rpppselpap gwwappsspa prpadrppke
      481 kkkkplalag gpvgadragp gvkpgvrkpv hikksrprea qplfpplrqi ileglrppas
      541 edvqahppap vpasqgsvvp lppepslalf apspsgdsll aptqemrsps pvaalhpgst
      601 gplppaddkl eelirqfeae fgdsfglpgp psvpiqdpen qptclpapes pfatrspkqi
      661 kiessgavtv lsttcfhsee ggqeatppka enpltptlsg flesplkyld tptkslldtp
      721 akraqaefpt cdcveqivek degpyythlg sgptvasire lmeerygekg kairiekviy
      781 tgkegkssrg cpiakwvirr htleekllcl vrhraghhcq navivilila wegiprslgd
      841 tlyqeltdtl rkygnptsrr cglnddrtca cqgkdpntcg asfsfgcsws myfngckyar
      901 sktprkfrla gdnpkeeevl rksfqdlate vaplykrlap qayqnqvtne eiaidcrlgl
      961 kegrpfsgvt acmdfcahah kdqhnlyngc tvvctltked nrcvgkiped eqlhvlplyk
     1021 mastdefgse enqnakvgsg aiqvltafpr evrrlpepak scrqrqlear kaaaekkkvq
     1081 keklstpeki kqealelagi ttdpglslka glsqqslkps lkvepqnpfs sfkyggntvv
     1141 esysvlgscr psdpysvnsv ysyhsyyaqp glasvngfhs kyalpsfsyy gfpasnpvfp
     1201 sqflgagawg hgggsssfek kpdlhalhns lspayggaef aelpgqavpt dthhpashhq
     1261 qpaypvpkey llpkapqihp vsrdpspfaq ssncynrsik qepvdplvht esvsrepgkm
     1321 gktplpeasq nggpshlwgq ysggpsmspk rtnsvggswg vfppvesptv ipdklgsfgg
     1381 acltpshfsd gqhqwglfpg egqqpapqpg grlrgkpwsp ckfgsnasal agpgltekpw
     1441 gvgvgdfssa lkggpgfqdk lwsplkgeeg riptpgasql dkawqsfgmp lgpseklfga
     1501 lkseeklwdp fsleegtaeg ppnkgpvkee kgsgggtgga eeeeelwsds ehnfldenig
     1561 gvavapahgs iliecarrel hattplkkpn rchptrislv fyqhknlnqp nhglalweak
     1621 mkqlaerara rqeeaarlgl ghqeaklygk krkwggavvp esqhkekkgm vptrqalavp
     1681 tdsavtvssy aytkvtgpys rwi
//
LOCUS       XP_061011736            1661 aa            linear   MAM 02-DEC-2023
DEFINITION  methylcytosine dioxygenase TET3 isoform X5 [Dama dama].
ACCESSION   XP_061011736
VERSION     XP_061011736.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155753.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1661
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1661
                     /product="methylcytosine dioxygenase TET3 isoform X5"
                     /calculated_mol_wt=178502
     Region          <166..687
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          689..>1013
                     /region_name="TET3"
                     /note="oxygenase domain of ten-eleven translocation (TET)3
                     methylcytosine dioxygenase and similar proteins; cd18897"
                     /db_xref="CDD:380676"
     Region          <1504..1632
                     /region_name="Tet_JBP"
                     /note="oxygenase domain of ten-eleven translocation (TET)
                     enzymes, J-binding proteins (JBPs), and similar proteins;
                     cl40427"
                     /db_xref="CDD:394797"
     CDS             1..1661
                     /gene="TET3"
                     /coded_by="XM_061155753.1:499..5484"
                     /db_xref="GeneID:133065074"
ORIGIN      
        1 mdsgpvyhgd srqlsasgap vngarepagp sllgagspwq adqkpgwdta pgpahtarle
       61 dahdlvafsa vaeavssyga lstrlyetfn remsreagnn srgprsgpes csassedldt
      121 lqaalalarh gmkppncncd gpecpdylew legkiksvvv eggeerprlp gtlpsgdagl
      181 papitgplln aevpqipple glplsqsals iakeknislq taiaiealtq lssalpqpsh
      241 atsqascplp ealsppapfr spqsylraps wpvgppeehp sfapdgpafp aatprtefpe
      301 awgtdtppat pqsswpmprp spdpmaeleq llgsasdyiq svfkrpealp tkpkvkveap
      361 ssspspvlqr eaptpssepd thqkaqtalq qhlhhkrslf leqahdasrp ppselpapgw
      421 wappsspapr padrppkekk kkplalaggp vgadragpgv kpgvrkpvhi kksrpreaqp
      481 lfpplrqiil eglrppased vqahppapvp asqgsvvplp pepslalfap spsgdsllap
      541 tqemrspspv aalhpgstgp lppaddklee lirqfeaefg dsfglpgpps vpiqdpenqp
      601 tclpapespf atrspkqiki essgavtvls ttcfhseegg qeatppkaen pltptlsgfl
      661 esplkyldtp tkslldtpak raqaefptcd cveqivekde gpyythlgsg ptvasirelm
      721 eerygekgka iriekviytg kegkssrgcp iakwvirrht leekllclvr hraghhcqna
      781 vivililawe giprslgdtl yqeltdtlrk ygnptsrrcg lnddrtcacq gkdpntcgas
      841 fsfgcswsmy fngckyarsk tprkfrlagd npkeeevlrk sfqdlateva plykrlapqa
      901 yqnqvtneei aidcrlglke grpfsgvtac mdfcahahkd qhnlyngctv vctltkednr
      961 cvgkipedeq lhvlplykma stdefgseen qnakvgsgai qvltafprev rrlpepaksc
     1021 rqrqlearka aaekkkvqke klstpekikq ealelagitt dpglslkagl sqqslkpslk
     1081 vepqnpfssf kyggntvves ysvlgscrps dpysvnsvys yhsyyaqpgl asvngfhsky
     1141 alpsfsyygf pasnpvfpsq flgagawghg ggsssfekkp dlhalhnsls payggaefae
     1201 lpgqavptdt hhpashhqqp aypvpkeyll pkapqihpvs rdpspfaqss ncynrsikqe
     1261 pvdplvhtes vsrepgkmgk tplpeasqng gpshlwgqys ggpsmspkrt nsvggswgvf
     1321 ppvesptvip dklgsfggac ltpshfsdgq hqwglfpgeg qqpapqpggr lrgkpwspck
     1381 fgsnasalag pgltekpwgv gvgdfssalk ggpgfqdklw splkgeegri ptpgasqldk
     1441 awqsfgmplg pseklfgalk seeklwdpfs leegtaegpp nkgpvkeekg sgggtggaee
     1501 eeelwsdseh nfldeniggv avapahgsil iecarrelha ttplkkpnrc hptrislvfy
     1561 qhknlnqpnh glalweakmk qlaerararq eeaarlglgh qeaklygkkr kwggavvpes
     1621 qhkekkgmvp trqalavptd savtvssyay tkvtgpysrw i
//
LOCUS       XP_061011737             110 aa            linear   MAM 02-DEC-2023
DEFINITION  bolA-like protein 3 [Dama dama].
ACCESSION   XP_061011737
VERSION     XP_061011737.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155754.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..110
                     /product="bolA-like protein 3"
                     /calculated_mol_wt=12254
     Region          43..109
                     /region_name="BolA"
                     /note="BolA-like protein; cl00386"
                     /db_xref="CDD:469753"
     CDS             1..110
                     /gene="BOLA3"
                     /coded_by="XM_061155754.1:73..405"
                     /db_xref="GeneID:133065077"
ORIGIN      
        1 maawspaaag pllrgtrrlp llhwaqrtfa sqtegelkvt qilkekfpra taikvtdisg
       61 gcgamyeiki eseefkekrt vqqhqmvnqa lkeeikgmhg lriftsvpkh
//
LOCUS       XP_061011738            1106 aa            linear   MAM 02-DEC-2023
DEFINITION  electrogenic sodium bicarbonate cotransporter 4 [Dama dama].
ACCESSION   XP_061011738
VERSION     XP_061011738.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155755.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1106
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1106
                     /product="electrogenic sodium bicarbonate cotransporter 4"
                     /calculated_mol_wt=122862
     Region          107..1040
                     /region_name="Band_3_cyto"
                     /note="Band 3 cytoplasmic domain; cl26877"
                     /db_xref="CDD:452680"
     CDS             1..1106
                     /gene="SLC4A5"
                     /coded_by="XM_061155755.1:1..3321"
                     /db_xref="GeneID:133065078"
ORIGIN      
        1 mkveekeagv gkldpanyrr rcqdqedcrs ihiglsvpsy phrkrdqkgh lpglqkvrwg
       61 lrpdkpqqgl asagssvdhv sktrspaaeq lqdilgeede apnptlftem dtlqhdgdqm
      121 ewkesarwik feekveegge rwskphvstl slhslfelrt clqtgtvlld ldggslpqii
      181 ddviekqied gllrpelrer vsyvllrrhr hqttkpihrs ladigkavss tsrsparspa
      241 agpslhhste dlrvrqsany grlchaqsrs mndisltlnt dqrknkfmkk ipkdseasnv
      301 lvgevdfldq pfiafvrliq samlggvtev pvptrflfil lgpsgraksy neigraiatl
      361 mvddlfsdva ykarnredli agidefldev ivlppgewdp nirieppkkv psadkrksvf
      421 smtelgqmng svagggggaa gggaagsggg ggagggsssd dgemptvhei geeliwtgrf
      481 fgglcldvkr klpwfpsdfy dgfhiqsisa ilfiylgcit naitfggllg datdnyqgvm
      541 esflgtamag slfclfsgqp liilsstgpi lifekllfdf skgngldyme frlwiglhsa
      601 vqclilvatd asfvikyitr fteegfstli sfifiydaik kmigtfkyyp invnfkpdsi
      661 ttykcecvap dtanttvfna satlppntnt slynplnlta ldwsllskke clnyggrllg
      721 nscqfipdla lmsfilffgt ysmtltlkkf kfsryfptkv raliadfsii fsillfcgid
      781 acfglatpkl lvpseikptr pdrgwfvapf gknpwwvyla silpallvti lifmdqqita
      841 vivnrkenkl rkaagyhldl fwvgilmalc sfmglpwyva atvisiahid slkmetetsa
      901 pgeqpqflgv reqrvtgiiv filtgtsvfl apilqyiplp vlygvflymg vaslngiqfw
      961 drcklflmpa khqpdhaflr hvplrrihlf tlvqilclav lwilkstmaa iifpvmilgl
     1021 iivrrlldlv fsqhdlawid nilpekekke adkkkrrkga hedsdeepqf pppsvikipm
     1081 esvqsdpqng ihcinrqgss swsysl
//
LOCUS       XP_061011739             378 aa            linear   MAM 02-DEC-2023
DEFINITION  bifunctional methylenetetrahydrofolate
            dehydrogenase/cyclohydrolase, mitochondrial [Dama dama].
ACCESSION   XP_061011739
VERSION     XP_061011739.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155756.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..378
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/cyclohydrolase, mitochondrial"
                     /calculated_mol_wt=40648
     Region          65..363
                     /region_name="FolD"
                     /note="5,10-methylene-tetrahydrofolate
                     dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
                     [Coenzyme transport and metabolism]; COG0190"
                     /db_xref="CDD:439960"
     CDS             1..378
                     /gene="MTHFD2"
                     /coded_by="XM_061155756.1:25..1161"
                     /db_xref="GeneID:133065079"
ORIGIN      
        1 mgagrrrglp rcsgitvrpa rvsfpaltma aasfittlvt rllrsaqsgr lrqrpfhlsa
       61 vrneaviisg rklaeqikqe vrqeveewva sgnkrphlsv vlvgenpasq syvlnktraa
      121 asvginseti vkpasiseee llnlinklnn ddnvdgllvq lplpehider kvcnavspdk
      181 dvdgfhvinv grmcldqcsm lpatpwgvwe iikrtgiptl gknvvvagrs knvgmpiaml
      241 lhtdgaherp ggdatvtish rytpkeelkk htaladivis aagipnlita dmikegaavi
      301 dvginriqdp vtakpklvgd vdfegvkkka gyitpvpggv gpmtvamlmk ntiiaakkvl
      361 rleerevlks kelgvasn
//
LOCUS       XP_061011740             216 aa            linear   MAM 02-DEC-2023
DEFINITION  MOB kinase activator 1A [Dama dama].
ACCESSION   XP_061011740
VERSION     XP_061011740.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155757.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..216
                     /product="MOB kinase activator 1A"
                     /calculated_mol_wt=24949
     Region          33..204
                     /region_name="Mob1_phocein"
                     /note="Mob1/phocein family; pfam03637"
                     /db_xref="CDD:461000"
     CDS             1..216
                     /gene="MOB1A"
                     /coded_by="XM_061155757.1:227..877"
                     /db_xref="GeneID:133065080"
ORIGIN      
        1 msflfssrss ktfkpkknip egshqyellk haeatlgsgn lrqavmlpeg edlnewiavn
       61 tvdffnqinm lygtitefct eascpvmsag pryeyhwadg tnikkpikcs apkyidylmt
      121 wvqdqlddet lfpskigvpf pknfmsvakt ilkrlfrvya hiyhqhfdsv mqlqeeahln
      181 tsfkhfiffv qefnlidrre laplqeliek lgskdr
//
LOCUS       XP_061011741            1256 aa            linear   MAM 02-DEC-2023
DEFINITION  dynactin subunit 1 isoform X1 [Dama dama].
ACCESSION   XP_061011741
VERSION     XP_061011741.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155758.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1256
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1256
                     /product="dynactin subunit 1 isoform X1"
                     /calculated_mol_wt=138748
     Region          29..94
                     /region_name="CAP_GLY"
                     /note="CAP-Gly domain; pfam01302"
                     /db_xref="CDD:460154"
     Region          <100..>202
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          <201..>495
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          503..785
                     /region_name="Dynactin"
                     /note="Dynein associated protein; pfam12455"
                     /db_xref="CDD:463591"
     Region          <906..>1026
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..1256
                     /gene="DCTN1"
                     /coded_by="XM_061155758.1:16..3786"
                     /db_xref="GeneID:133065082"
ORIGIN      
        1 maqskrhvys rtpsgsrmsa easarplrvg srvevigkgh rgtvayvgat lfatgkwvgv
       61 ildeakgknd gtvqgrkyft cdeghgifvr qsqiqvfedg adttspetpd ssaskvlrre
      121 gtdtnpktsk lptrpastgv agasgslgps gsasagelss sepstpaqtp laapiiptpa
      181 ltspgaalpl pspskeeegl raqvrdleek letlrlkrae dkaklkelek hkiqleqvqe
      241 wkskmqeqqa dlqrrlkear keakealeak erymeemadt adaiematld kemaeeraes
      301 lqqeaevlre rveelttdle ilkaeieekg sdgaassyql kqleeqnarl kdalvrmrdl
      361 sssekqehvk lqklmekknq elevvrqqre rlqeelsqae rtidelkeqv daalgaeemv
      421 etltdrnldl eekvrklket vgdleainem ndelqenare telelreqld magaqvrdaq
      481 krveaaqetv adyqqtikky rqltahlqdv nraltnqqea sverqqqppp etfdfkikfa
      541 etkahakaie melrqmevaq anrhmsllta fmpdsflrpg gdhdcvlvll lmprlickae
      601 lirkqaqekf elsescserp glrgaageql sfaaglvysl sllqatlhry ehalsqcsvd
      661 vykkvgslyp emsahersld fliellhkdq ldetvnvepl tkaikyyqhl ysihlaeqpe
      721 dstmqladhi kftqsaldcm svevgrlraf lqggqeasdi alllrdlets csdtrqfckk
      781 irrrmpgtda pgipaalafg pqvsdtlldc rkhltwvvav lqevaaaaaq liaplaeneg
      841 lpvaaleela fkaseqiyga pssnpyeclr qscsllistm nklatamqeg eydaerppsk
      901 pppvelraaa lraeitdaeg lglkledret vikelkkslk ikgeelsean vrlsllekkl
      961 dsaakdader iekvqtrlee tqtllrkkek efeetmdalq adidqleaek aelkqrlnsq
     1021 skrtieglrg pppsgiatlv sgiagggapg qppgsvpgpg lvkdsplllq qisamrlhis
     1081 qlqhennilk gakmkaslaa lpplhvakls lpphegpgse laagalyrkt nqlletlnql
     1141 sarthvvdit rsnpaaksps aqlleqvaql kslsdtiekl kdevlketvs qrpgatvptd
     1201 fatfpssafl rakeeqqddt vymgkvtfsc aaglgqrhrl vltqeqlhql hdrlis
//
LOCUS       XP_061011742            1239 aa            linear   MAM 02-DEC-2023
DEFINITION  dynactin subunit 1 isoform X2 [Dama dama].
ACCESSION   XP_061011742
VERSION     XP_061011742.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155759.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1239
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1239
                     /product="dynactin subunit 1 isoform X2"
                     /calculated_mol_wt=136818
     Region          12..77
                     /region_name="CAP_GLY"
                     /note="CAP-Gly domain; pfam01302"
                     /db_xref="CDD:460154"
     Region          <83..>185
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          <184..>478
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          486..768
                     /region_name="Dynactin"
                     /note="Dynein associated protein; pfam12455"
                     /db_xref="CDD:463591"
     Region          <889..>1009
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..1239
                     /gene="DCTN1"
                     /coded_by="XM_061155759.1:256..3975"
                     /db_xref="GeneID:133065082"
ORIGIN      
        1 msaeasarpl rvgsrvevig kghrgtvayv gatlfatgkw vgvildeakg kndgtvqgrk
       61 yftcdeghgi fvrqsqiqvf edgadttspe tpdssaskvl rregtdtnpk tsklptrpas
      121 tgvagasgsl gpsgsasage lsssepstpa qtplaapiip tpaltspgaa lplpspskee
      181 eglraqvrdl eekletlrlk raedkaklke lekhkiqleq vqewkskmqe qqadlqrrlk
      241 earkeakeal eakerymeem adtadaiema tldkemaeer aeslqqeaev lrerveeltt
      301 dleilkaeie ekgsdgaass yqlkqleeqn arlkdalvrm rdlsssekqe hvklqklmek
      361 knqelevvrq qrerlqeels qaertidelk eqvdaalgae emvetltdrn ldleekvrkl
      421 ketvgdleai nemndelqen aretelelre qldmagaqvr daqkrveaaq etvadyqqti
      481 kkyrqltahl qdvnraltnq qeasverqqq pppetfdfki kfaetkahak aiemelrqme
      541 vaqanrhmsl ltafmpdsfl rpggdhdcvl vlllmprlic kaelirkqaq ekfelsescs
      601 erpglrgaag eqlsfaaglv yslsllqatl hryehalsqc svdvykkvgs lypemsaher
      661 sldfliellh kdqldetvnv epltkaikyy qhlysihlae qpedstmqla dhikftqsal
      721 dcmsvevgrl raflqggqea sdialllrdl etscsdtrqf ckkirrrmpg tdapgipaal
      781 afgpqvsdtl ldcrkhltwv vavlqevaaa aaqliaplae neglpvaale elafkaseqi
      841 ygapssnpye clrqscslli stmnklatam qegeydaerp pskpppvelr aaalraeitd
      901 aeglglkled retvikelkk slkikgeels eanvrlslle kkldsaakda deriekvqtr
      961 leetqtllrk kekefeetmd alqadidqle aekaelkqrl nsqskrtieg lrgpppsgia
     1021 tlvsgiaggg apgqppgsvp gpglvkdspl llqqisamrl hisqlqhenn ilkgakmkas
     1081 laalpplhva klslpphegp gselaagaly rktnqlletl nqlsarthvv ditrsnpaak
     1141 spsaqlleqv aqlkslsdti eklkdevlke tvsqrpgatv ptdfatfpss aflrakeeqq
     1201 ddtvymgkvt fscaaglgqr hrlvltqeql hqlhdrlis
//
LOCUS       XP_061011743            1042 aa            linear   MAM 02-DEC-2023
DEFINITION  dynactin subunit 1 isoform X3 [Dama dama].
ACCESSION   XP_061011743
VERSION     XP_061011743.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155760.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1042
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1042
                     /product="dynactin subunit 1 isoform X3"
                     /calculated_mol_wt=115801
     Region          12..77
                     /region_name="CAP_GLY"
                     /note="CAP-Gly domain; pfam01302"
                     /db_xref="CDD:460154"
     Region          <83..>185
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          <184..>478
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          486..768
                     /region_name="Dynactin"
                     /note="Dynein associated protein; pfam12455"
                     /db_xref="CDD:463591"
     Region          <888..>1009
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..1042
                     /gene="DCTN1"
                     /coded_by="XM_061155760.1:19..3147"
                     /db_xref="GeneID:133065082"
ORIGIN      
        1 msaeasarpl rvgsrvevig kghrgtvayv gatlfatgkw vgvildeakg kndgtvqgrk
       61 yftcdeghgi fvrqsqiqvf edgadttspe tpdssaskvl rregtdtnpk tsklptrpas
      121 tgvagasgsl gpsgsasage lsssepstpa qtplaapiip tpaltspgaa lplpspskee
      181 eglraqvrdl eekletlrlk raedkaklke lekhkiqleq vqewkskmqe qqadlqrrlk
      241 earkeakeal eakerymeem adtadaiema tldkemaeer aeslqqeaev lrerveeltt
      301 dleilkaeie ekgsdgaass yqlkqleeqn arlkdalvrm rdlsssekqe hvklqklmek
      361 knqelevvrq qrerlqeels qaertidelk eqvdaalgae emvetltdrn ldleekvrkl
      421 ketvgdleai nemndelqen aretelelre qldmagaqvr daqkrveaaq etvadyqqti
      481 kkyrqltahl qdvnraltnq qeasverqqq pppetfdfki kfaetkahak aiemelrqme
      541 vaqanrhmsl ltafmpdsfl rpggdhdcvl vlllmprlic kaelirkqaq ekfelsescs
      601 erpglrgaag eqlsfaaglv yslsllqatl hryehalsqc svdvykkvgs lypemsaher
      661 sldfliellh kdqldetvnv epltkaikyy qhlysihlae qpedstmqla dhikftqsal
      721 dcmsvevgrl raflqggqea sdialllrdl etscsdtrqf ckkirrrmpg tdapgipaal
      781 afgpqvsdtl ldcrkhltwv vavlqevaaa aaqliaplae neglpvaale elafkaseqi
      841 ygapssnpye clrqscslli stmnklatam qegeydaerp pskpppvelr aaalraeitd
      901 aeglglkled retvikelkk slkikgeels eanvrlslle kkldsaakda deriekvqtr
      961 leetqtllrk kekefeetmd alqadidqle aekaelkqrl nsqskrtieg lrgpppsgia
     1021 tlvsgiagee qqrgraptcw gr
//
LOCUS       XP_061011744             330 aa            linear   MAM 02-DEC-2023
DEFINITION  retinol dehydrogenase 12-like isoform X1 [Dama dama].
ACCESSION   XP_061011744
VERSION     XP_061011744.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155761.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..330
                     /product="retinol dehydrogenase 12-like isoform X1"
                     /calculated_mol_wt=35928
     Region          49..317
                     /region_name="retinol-DH_like_SDR_c_like"
                     /note="retinol dehydrogenase (retinol-DH), Light dependent
                     Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and
                     related proteins, classical (c) SDRs; cd05327"
                     /db_xref="CDD:212492"
     Site            order(56,58..61,80..82,107..109,135..137,156,189..191,215,
                     241..244,246..247)
                     /site_type="other"
                     /note="putative NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:212492"
     CDS             1..330
                     /gene="LOC133065085"
                     /coded_by="XM_061155761.1:64..1056"
                     /db_xref="GeneID:133065085"
ORIGIN      
        1 mslwsvlssp vwgagsvlli lvlllrlsvq mwhkfylwdl qhcstdltgk tavvtgansg
       61 igkavsqela rrgarvilac rsrergqqal aeiqvaskss rlllgevdls smasirsfaq
      121 rllqecpeih llvnnaavcg lpttltpegl dltfatnytg pflltnllqg alqwagsarv
      181 vnvssfrqsh gyidedhlvg agrplafnqn ydcsklllas ftgklaqrlr gtgvtvnsvd
      241 pgvaytkimk hlswsyrilf wllsfffkds kqgavpvlyl slakeldgis gkhfssscvi
      301 tlppeaaqdp hvaqslwnts vrltnldkvd
//
LOCUS       XP_061011745             300 aa            linear   MAM 02-DEC-2023
DEFINITION  retinol dehydrogenase 12-like isoform X2 [Dama dama].
ACCESSION   XP_061011745
VERSION     XP_061011745.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155762.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..300
                     /product="retinol dehydrogenase 12-like isoform X2"
                     /calculated_mol_wt=32723
     Region          49..287
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(56,58..59,61,80..82,135..137,159..161,185,211..214)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:212492"
     CDS             1..300
                     /gene="LOC133065085"
                     /coded_by="XM_061155762.1:65..967"
                     /db_xref="GeneID:133065085"
ORIGIN      
        1 mslwsvlssp vwgagsvlli lvlllrlsvq mwhkfylwdl qhcstdltgk tavvtgansg
       61 igkavsqela rrgarvilac rsrergqqal aeiqvaskss rlllgevdls smasirsfaq
      121 rllqecpeih llvnnaavcg alqwagsarv vnvssfrqsh gyidedhlvg agrplafnqn
      181 ydcsklllas ftgklaqrlr gtgvtvnsvd pgvaytkimk hlswsyrilf wllsfffkds
      241 kqgavpvlyl slakeldgis gkhfssscvi tlppeaaqdp hvaqslwnts vrltnldkvd
//
LOCUS       XP_061011746             267 aa            linear   MAM 02-DEC-2023
DEFINITION  retinol dehydrogenase 12-like isoform X3 [Dama dama].
ACCESSION   XP_061011746
VERSION     XP_061011746.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155763.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..267
                     /product="retinol dehydrogenase 12-like isoform X3"
                     /calculated_mol_wt=29096
     Region          49..254
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     CDS             1..267
                     /gene="LOC133065085"
                     /coded_by="XM_061155763.1:63..866"
                     /db_xref="GeneID:133065085"
ORIGIN      
        1 mslwsvlssp vwgagsvlli lvlllrlsvq mwhkfylwdl qhcstdltgk tavvtgansg
       61 igkavsqela rrgarvilac rsrergqqal aeiqvaskss rlllgevdls smasirsfaq
      121 rllqecpeih llvnnaavcg lpttltpegl dltfatnytg pflltnllqg vtvnsvdpgv
      181 aytkimkhls wsyrilfwll sfffkdskqg avpvlylsla keldgisgkh fssscvitlp
      241 peaaqdphva qslwntsvrl tnldkvd
//
LOCUS       XP_061011747             539 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C2orf81 homolog [Dama dama].
ACCESSION   XP_061011747
VERSION     XP_061011747.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155764.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..539
                     /product="uncharacterized protein C2orf81 homolog"
                     /calculated_mol_wt=57968
     Region          1..512
                     /region_name="DUF4639"
                     /note="Domain of unknown function (DUF4639); pfam15479"
                     /db_xref="CDD:464739"
     CDS             1..539
                     /gene="C11H2orf81"
                     /coded_by="XM_061155764.1:601..2220"
                     /db_xref="GeneID:133065086"
ORIGIN      
        1 mlqitewrfl ardegesava edptwgedee placttdawa qgsvpvlhar asvgleetfq
       61 gevspasscr ppltaapdpl lapdlhpcaf pqdqesvdqi plegswtdsg sqermeswel
      121 tvtpgspptp ellqetgprg pleklgdqsr gdqtdqfaag swnsssqlsm emvpagstha
      181 slelslvasp qasveraqpi ssqfsledhy dctpqphaag dgpelreekv plissrvlvs
      241 dpsaggsttl spsagfqpqp pwladerpsa lhsrigrkra tarldparlp rpwvrplsev
      301 lvpdsegrpl eayrgrqqge kteapggpqa yvswseffpf ppgvpvralg pglslqfptl
      361 slglpspgfg sklpfpspgl rflathrarr dmarspspkl wpgakwpsgw egeaellgel
      421 wagrtrvppq gldpgdrksq dphqclhpvp qvleatsqvt wkpvllpgal klapgvsiwn
      481 pstqvlvsaa epqrderegs asppihtdap kpqvtvaqlm nsavklwslp skrlphskp
//
LOCUS       XP_061011748             334 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 54 isoform X1 [Dama dama].
ACCESSION   XP_061011748
VERSION     XP_061011748.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155765.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..334
                     /product="WD repeat-containing protein 54 isoform X1"
                     /calculated_mol_wt=35458
     Region          72..112
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          118..162
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <124..282
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          167..208
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          216..249
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          255..292
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..334
                     /gene="WDR54"
                     /coded_by="XM_061155765.1:468..1472"
                     /db_xref="GeneID:133065087"
ORIGIN      
        1 mfrrersipl rgsaaalcnn lsvlplptrn lthfgvvhgp saqllsaapd gvplaqrqlh
       61 akegagvspp litqihwcvl pfrvllvlts hrgiqmyesd gsvmvywhal dagdaslaqa
      121 vfargiaasg hyvcvgtwsg rvlvfdiptk gpnivlseel arhqtpitdi atepaqgqdc
      181 vantvtadds gllcvwrsgp kfklltqipg fgapcssvql wqgtvaagyg ngqvrlyeas
      241 tgtlhvqisa haravcaldl apeagkllsa aedtfihiwk lsrspeggyi evehghgecv
      301 pdtqicgarf cdpsgssfav tgydlaeilr fssm
//
LOCUS       XP_061011749             334 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 54 isoform X1 [Dama dama].
ACCESSION   XP_061011749
VERSION     XP_061011749.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155766.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..334
                     /product="WD repeat-containing protein 54 isoform X1"
                     /calculated_mol_wt=35458
     Region          72..112
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          118..162
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <124..282
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          167..208
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          216..249
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          255..292
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..334
                     /gene="WDR54"
                     /coded_by="XM_061155766.1:23..1027"
                     /db_xref="GeneID:133065087"
ORIGIN      
        1 mfrrersipl rgsaaalcnn lsvlplptrn lthfgvvhgp saqllsaapd gvplaqrqlh
       61 akegagvspp litqihwcvl pfrvllvlts hrgiqmyesd gsvmvywhal dagdaslaqa
      121 vfargiaasg hyvcvgtwsg rvlvfdiptk gpnivlseel arhqtpitdi atepaqgqdc
      181 vantvtadds gllcvwrsgp kfklltqipg fgapcssvql wqgtvaagyg ngqvrlyeas
      241 tgtlhvqisa haravcaldl apeagkllsa aedtfihiwk lsrspeggyi evehghgecv
      301 pdtqicgarf cdpsgssfav tgydlaeilr fssm
//
LOCUS       XP_061011750             313 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 54 isoform X2 [Dama dama].
ACCESSION   XP_061011750
VERSION     XP_061011750.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155767.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..313
                     /product="WD repeat-containing protein 54 isoform X2"
                     /calculated_mol_wt=32988
     Region          <103..261
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          146..187
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          195..228
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          234..271
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..313
                     /gene="WDR54"
                     /coded_by="XM_061155767.1:468..1409"
                     /db_xref="GeneID:133065087"
ORIGIN      
        1 mfrrersipl rgsaaalcnn lsvlplptrn lthfgvvhgp saqllsaapd gvplaqrqlh
       61 akegagvspp litqmyesdg svmvywhald agdaslaqav fargiaasgh yvcvgtwsgr
      121 vlvfdiptkg pnivlseela rhqtpitdia tepaqgqdcv antvtaddsg llcvwrsgpk
      181 fklltqipgf gapcssvqlw qgtvaagygn gqvrlyeast gtlhvqisah aravcaldla
      241 peagkllsaa edtfihiwkl srspeggyie vehghgecvp dtqicgarfc dpsgssfavt
      301 gydlaeilrf ssm
//
LOCUS       XP_061011751             564 aa            linear   MAM 02-DEC-2023
DEFINITION  rhotekin isoform X1 [Dama dama].
ACCESSION   XP_061011751
VERSION     XP_061011751.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155768.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..564
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..564
                     /product="rhotekin isoform X1"
                     /calculated_mol_wt=62262
     Region          37..91
                     /region_name="Hr1"
                     /note="Rho effector or protein kinase C-related kinase
                     homology region 1 homologues; smart00742"
                     /db_xref="CDD:128981"
     Region          117..270
                     /region_name="Anillin"
                     /note="Cell division protein anillin; pfam08174"
                     /db_xref="CDD:462393"
     Region          309..419
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          <434..>556
                     /region_name="PHA03378"
                     /note="EBNA-3B; Provisional"
                     /db_xref="CDD:223065"
     CDS             1..564
                     /gene="RTKN"
                     /coded_by="XM_061155768.1:190..1884"
                     /db_xref="GeneID:133065089"
ORIGIN      
        1 mfsrnhrsrv tvargsalem efkrgrfrls llsdppedte lqrkldheir mregacklla
       61 acsqreqale atksllvcns rilnymgelq rrkeaqvlkk tgrrpsdsgp hterspcrgq
      121 icisdlripl mwkdteyfkn kgdlhrwavf lllqigehiq dtemilvdrt ltdisfqnnv
      181 lfaeagpdfe lrlelygacv eeegalagap krlatklsss lgrssgrrvr asletaggsg
      241 sspillptpa vggpryhlla httltlaavq dgfrthdltl atpeenpawl plygsmccrl
      301 vaqplcmtqp tasgtlrvqq ageprdwvqv hgvlkgtnlf cyrqpedtap gaeplftiai
      361 nkdtqvrage ldqaaggpft lsirnqdgee evihtlqaes rgalqswmea lwqlffdmsq
      421 wkqccdeimk ietpaprkpp qvlakqgsly hemaiepldd iaavtdilaq regarletpp
      481 pwlamftdqp alpgpcspas vapaparihs lpwgrprtfs ldavppdhsp gasrlvaplp
      541 lqrsprsrgl cskgpphtwl qspv
//
LOCUS       XP_061011752             551 aa            linear   MAM 02-DEC-2023
DEFINITION  rhotekin isoform X2 [Dama dama].
ACCESSION   XP_061011752
VERSION     XP_061011752.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155769.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..551
                     /product="rhotekin isoform X2"
                     /calculated_mol_wt=60873
     Region          23..78
                     /region_name="Hr1"
                     /note="Rho effector or protein kinase C-related kinase
                     homology region 1 homologues; smart00742"
                     /db_xref="CDD:128981"
     Region          104..257
                     /region_name="Anillin"
                     /note="Cell division protein anillin; pfam08174"
                     /db_xref="CDD:462393"
     Region          296..406
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          <421..>543
                     /region_name="PHA03378"
                     /note="EBNA-3B; Provisional"
                     /db_xref="CDD:223065"
     CDS             1..551
                     /gene="RTKN"
                     /coded_by="XM_061155769.1:509..2164"
                     /db_xref="GeneID:133065089"
ORIGIN      
        1 mqdrlhiled lnmlyirqma lsledtelqr kldheirmre gackllaacs qreqaleatk
       61 sllvcnsril nymgelqrrk eaqvlkktgr rpsdsgphte rspcrgqici sdlriplmwk
      121 dteyfknkgd lhrwavflll qigehiqdte milvdrtltd isfqnnvlfa eagpdfelrl
      181 elygacveee galagapkrl atklssslgr ssgrrvrasl etaggsgssp illptpavgg
      241 pryhllahtt ltlaavqdgf rthdltlatp eenpawlply gsmccrlvaq plcmtqptas
      301 gtlrvqqage prdwvqvhgv lkgtnlfcyr qpedtapgae plftiainkd tqvrageldq
      361 aaggpftlsi rnqdgeeevi htlqaesrga lqswmealwq lffdmsqwkq ccdeimkiet
      421 paprkppqvl akqgslyhem aieplddiaa vtdilaqreg arletpppwl amftdqpalp
      481 gpcspasvap aparihslpw grprtfslda vppdhspgas rlvaplplqr sprsrglcsk
      541 gpphtwlqsp v
//
LOCUS       XP_061011753             521 aa            linear   MAM 02-DEC-2023
DEFINITION  rhotekin isoform X3 [Dama dama].
ACCESSION   XP_061011753
VERSION     XP_061011753.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155770.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..521
                     /product="rhotekin isoform X3"
                     /calculated_mol_wt=57555
     Region          37..91
                     /region_name="Hr1"
                     /note="Rho effector or protein kinase C-related kinase
                     homology region 1 homologues; smart00742"
                     /db_xref="CDD:128981"
     Region          117..270
                     /region_name="Anillin"
                     /note="Cell division protein anillin; pfam08174"
                     /db_xref="CDD:462393"
     Region          309..419
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     CDS             1..521
                     /gene="RTKN"
                     /coded_by="XM_061155770.1:198..1763"
                     /db_xref="GeneID:133065089"
ORIGIN      
        1 mfsrnhrsrv tvargsalem efkrgrfrls llsdppedte lqrkldheir mregacklla
       61 acsqreqale atksllvcns rilnymgelq rrkeaqvlkk tgrrpsdsgp hterspcrgq
      121 icisdlripl mwkdteyfkn kgdlhrwavf lllqigehiq dtemilvdrt ltdisfqnnv
      181 lfaeagpdfe lrlelygacv eeegalagap krlatklsss lgrssgrrvr asletaggsg
      241 sspillptpa vggpryhlla httltlaavq dgfrthdltl atpeenpawl plygsmccrl
      301 vaqplcmtqp tasgtlrvqq ageprdwvqv hgvlkgtnlf cyrqpedtap gaeplftiai
      361 nkdtqvrage ldqaaggpft lsirnqdgee evihtlqaes rgalqswmea lwqlffdmsq
      421 wkqccdeimk ietpaprkpp qvlakqgsly hemaiptvqr plqqrptphl apvtsvrekg
      481 agnriwpeee kicvqlgsgf stvsgrltsl aspsfagvga g
//
LOCUS       XP_061011754             514 aa            linear   MAM 02-DEC-2023
DEFINITION  rhotekin isoform X4 [Dama dama].
ACCESSION   XP_061011754
VERSION     XP_061011754.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155771.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..514
                     /product="rhotekin isoform X4"
                     /calculated_mol_wt=56310
     Region          <1..41
                     /region_name="HR1"
                     /note="Protein kinase C-related kinase homology region 1
                     (HR1) domain that binds Rho family small GTPases; cl00087"
                     /db_xref="CDD:469609"
     Region          67..220
                     /region_name="Anillin"
                     /note="Cell division protein anillin; pfam08174"
                     /db_xref="CDD:462393"
     Region          259..369
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          <384..>506
                     /region_name="PHA03378"
                     /note="EBNA-3B; Provisional"
                     /db_xref="CDD:223065"
     CDS             1..514
                     /gene="RTKN"
                     /coded_by="XM_061155771.1:187..1731"
                     /db_xref="GeneID:133065089"
ORIGIN      
        1 mregacklla acsqreqale atksllvcns rilnymgelq rrkeaqvlkk tgrrpsdsgp
       61 hterspcrgq icisdlripl mwkdteyfkn kgdlhrwavf lllqigehiq dtemilvdrt
      121 ltdisfqnnv lfaeagpdfe lrlelygacv eeegalagap krlatklsss lgrssgrrvr
      181 asletaggsg sspillptpa vggpryhlla httltlaavq dgfrthdltl atpeenpawl
      241 plygsmccrl vaqplcmtqp tasgtlrvqq ageprdwvqv hgvlkgtnlf cyrqpedtap
      301 gaeplftiai nkdtqvrage ldqaaggpft lsirnqdgee evihtlqaes rgalqswmea
      361 lwqlffdmsq wkqccdeimk ietpaprkpp qvlakqgsly hemaiepldd iaavtdilaq
      421 regarletpp pwlamftdqp alpgpcspas vapaparihs lpwgrprtfs ldavppdhsp
      481 gasrlvaplp lqrsprsrgl cskgpphtwl qspv
//
LOCUS       XP_061011755             490 aa            linear   MAM 02-DEC-2023
DEFINITION  rhotekin isoform X5 [Dama dama].
ACCESSION   XP_061011755
VERSION     XP_061011755.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155772.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..490
                     /product="rhotekin isoform X5"
                     /calculated_mol_wt=54228
     Region          37..91
                     /region_name="Hr1"
                     /note="Rho effector or protein kinase C-related kinase
                     homology region 1 homologues; smart00742"
                     /db_xref="CDD:128981"
     Region          117..270
                     /region_name="Anillin"
                     /note="Cell division protein anillin; pfam08174"
                     /db_xref="CDD:462393"
     Region          309..419
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     CDS             1..490
                     /gene="RTKN"
                     /coded_by="XM_061155772.1:198..1670"
                     /db_xref="GeneID:133065089"
ORIGIN      
        1 mfsrnhrsrv tvargsalem efkrgrfrls llsdppedte lqrkldheir mregacklla
       61 acsqreqale atksllvcns rilnymgelq rrkeaqvlkk tgrrpsdsgp hterspcrgq
      121 icisdlripl mwkdteyfkn kgdlhrwavf lllqigehiq dtemilvdrt ltdisfqnnv
      181 lfaeagpdfe lrlelygacv eeegalagap krlatklsss lgrssgrrvr asletaggsg
      241 sspillptpa vggpryhlla httltlaavq dgfrthdltl atpeenpawl plygsmccrl
      301 vaqplcmtqp tasgtlrvqq ageprdwvqv hgvlkgtnlf cyrqpedtap gaeplftiai
      361 nkdtqvrage ldqaaggpft lsirnqdgee evihtlqaes rgalqswmea lwqlffdmsq
      421 wkqccdeimk ietpaprkpp qvlakqgsly hemvlsepva pggpceglll qdnavsagir
      481 allsssyndr
//
LOCUS       XP_061011756             373 aa            linear   MAM 02-DEC-2023
DEFINITION  INO80 complex subunit B [Dama dama].
ACCESSION   XP_061011756
VERSION     XP_061011756.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155773.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..373
                     /product="INO80 complex subunit B"
                     /calculated_mol_wt=40295
     Region          228..303
                     /region_name="PAPA-1"
                     /note="PAPA-1-like conserved region; pfam04795"
                     /db_xref="CDD:461431"
     Region          326..356
                     /region_name="zf-HIT_IN80B"
                     /note="zinc finger HIT (zf-HIT) found in INO80 complex
                     subunit B (INO80B) and similar proteins; cd23021"
                     /db_xref="CDD:467793"
     Site            order(331,347,351)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:467793"
     Site            order(335..341,347..349,352..353)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467793"
     CDS             1..373
                     /gene="INO80B"
                     /coded_by="XM_061155773.1:46..1167"
                     /db_xref="GeneID:133065090"
ORIGIN      
        1 msecvstiys plslqglmsk lwrrgstsga meapepgeal elslagghgh gvhkkkhkkh
       61 kkkhkkkhyq eeevgptqqs pakpqlklki klggqvlgtk svptftvipe gprspsplmv
      121 vdneeepveg vpleqyrawl dedsnlspsp lrdlsgglgg qeeeeeqrwl dalekgeldd
      181 ngdlkkeine rlltarqral lqkarsqpsp mlslpvaggc papalteeml lkreerarkr
      241 rlqaarraee hknqtierlt ktaapsgrgg rgasrgerrg gravapapmv ryssgaqgst
      301 lsfppgvpap apvsqrpsps gppprcsvpg cphprryacs rtgqalcslq cyrinlqmrl
      361 ggpegpgspl lat
//
LOCUS       XP_061011757             303 aa            linear   MAM 02-DEC-2023
DEFINITION  WW domain-binding protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061011757
VERSION     XP_061011757.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155774.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..303
                     /product="WW domain-binding protein 1 isoform X1"
                     /calculated_mol_wt=32554
     Region          70..176
                     /region_name="WBP-1"
                     /note="WW domain-binding protein 1; pfam11669"
                     /db_xref="CDD:463321"
     Region          <150..302
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..303
                     /gene="WBP1"
                     /coded_by="XM_061155774.1:60..971"
                     /db_xref="GeneID:133065091"
ORIGIN      
        1 maratsgngs eeawgalrvr qqqslaassl egaiwrrdgt qnhavdaily hpqqshllre
       61 lcpgvnnqpy lcesghccge tgcctyyyel wwfwllwtvl ilfscccafr hrraklrlqq
      121 qqrqreinll ayhgachgag pvpagslldl rllsafkppa yedvvhrpgt ppppytaatg
      181 cpstassqct ccssasscpa hhegtnvedv sshqsapphq egelgagvsp aptppscryr
      241 rltgdsgiel cpcpdssege pvkearvsat lrevedqspc arplnpapqv spaglasseg
      301 dip
//
LOCUS       XP_061011758             298 aa            linear   MAM 02-DEC-2023
DEFINITION  WW domain-binding protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061011758
VERSION     XP_061011758.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155775.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..298
                     /product="WW domain-binding protein 1 isoform X2"
                     /calculated_mol_wt=31844
     Region          65..171
                     /region_name="WBP-1"
                     /note="WW domain-binding protein 1; pfam11669"
                     /db_xref="CDD:463321"
     CDS             1..298
                     /gene="WBP1"
                     /coded_by="XM_061155775.1:445..1341"
                     /db_xref="GeneID:133065091"
ORIGIN      
        1 mvaaakmgra gtmaveaesl aasslegaiw rrdgtqnhav dailyhpqqs hllrelcpgv
       61 nnqpylcesg hccgetgcct yyyelwwfwl lwtvlilfsc ccafrhrrak lrlqqqqrqr
      121 einllayhga chgagpvpag slldlrllsa fkppayedvv hrpgtppppy taatgcpsta
      181 ssqctccssa sscpahhegt nvedvsshqs apphqegelg agvspaptpp scryrrltgd
      241 sgielcpcpd ssegepvkea rvsatlreve dqspcarpln papqvspagl assegdip
//
LOCUS       XP_061011759             269 aa            linear   MAM 02-DEC-2023
DEFINITION  WW domain-binding protein 1 isoform X3 [Dama dama].
ACCESSION   XP_061011759
VERSION     XP_061011759.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155776.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..269
                     /product="WW domain-binding protein 1 isoform X3"
                     /calculated_mol_wt=28828
     Region          36..142
                     /region_name="WBP-1"
                     /note="WW domain-binding protein 1; pfam11669"
                     /db_xref="CDD:463321"
     Region          <116..268
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..269
                     /gene="WBP1"
                     /coded_by="XM_061155776.1:67..876"
                     /db_xref="GeneID:133065091"
ORIGIN      
        1 maratsgngs eeawgalrvr qqqlrelcpg vnnqpylces ghccgetgcc tyyyelwwfw
       61 llwtvlilfs cccafrhrra klrlqqqqrq reinllayhg achgagpvpa gslldlrlls
      121 afkppayedv vhrpgtpppp ytaatgcpst assqctccss asscpahheg tnvedvsshq
      181 sapphqegel gagvspaptp pscryrrltg dsgielcpcp dssegepvke arvsatlrev
      241 edqspcarpl npapqvspag lassegdip
//
LOCUS       XP_061011760             264 aa            linear   MAM 02-DEC-2023
DEFINITION  WW domain-binding protein 1 isoform X4 [Dama dama].
ACCESSION   XP_061011760
VERSION     XP_061011760.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155777.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..264
                     /product="WW domain-binding protein 1 isoform X4"
                     /calculated_mol_wt=28119
     Region          31..137
                     /region_name="WBP-1"
                     /note="WW domain-binding protein 1; pfam11669"
                     /db_xref="CDD:463321"
     Region          <111..263
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..264
                     /gene="WBP1"
                     /coded_by="XM_061155777.1:414..1208"
                     /db_xref="GeneID:133065091"
ORIGIN      
        1 mvaaakmgra gtmaveaelr elcpgvnnqp ylcesghccg etgcctyyye lwwfwllwtv
       61 lilfscccaf rhrraklrlq qqqrqreinl layhgachga gpvpagslld lrllsafkpp
      121 ayedvvhrpg tppppytaat gcpstassqc tccssasscp ahhegtnved vsshqsapph
      181 qegelgagvs paptppscry rrltgdsgie lcpcpdsseg epvkearvsa tlrevedqsp
      241 carplnpapq vspaglasse gdip
//
LOCUS       XP_061011761             835 aa            linear   MAM 02-DEC-2023
DEFINITION  mannosyl-oligosaccharide glucosidase [Dama dama].
ACCESSION   XP_061011761
VERSION     XP_061011761.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155778.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..835
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..835
                     /product="mannosyl-oligosaccharide glucosidase"
                     /calculated_mol_wt=92305
     Region          90..>237
                     /region_name="Glyco_hydro_63N"
                     /note="Glycosyl hydrolase family 63 N-terminal domain;
                     pfam16923"
                     /db_xref="CDD:465316"
     Region          350..833
                     /region_name="Glyco_hydro_63"
                     /note="Glycosyl hydrolase family 63 C-terminal domain;
                     pfam03200"
                     /db_xref="CDD:397353"
     CDS             1..835
                     /gene="MOGS"
                     /coded_by="XM_061155778.1:178..2685"
                     /db_xref="GeneID:133065093"
ORIGIN      
        1 margerrrrg apadgartae raarggparr hgrggragga alavvvlsla lglsgrwflp
       61 wyrarravml hsappalppd sssptvapdl fwgtyrphvy fgmktrspqp lltglmwaqq
      121 gttpgtpklr htceqgdgvg pygwefhdgv sfgrqhiqdg alrlttefvk rpggqhggdw
      181 swrvtvepqa sgtsarplvs lffyvvtdgk evlvpevgak gqlkfisght selgdfrftl
      241 laptspgdtt pkygsynvfw ssnpglpllt emvksrlnhw fqhqppgasp erylglpgsl
      301 kwddrgpsgq gqgqgqfliq qvtlkvpfsv elvfesgsar tggsqapell agrllthtle
      361 shaeafrerf ektfrlkekg lspeeqalgq aalsgllggi gyfygqglvl pdmevegseq
      421 kvdpvlfpsv plftavpsrs ffprgflwde gfhqlviqrw dprltreaig hwlgllnadg
      481 wigreqvlgd eararvpsef lvqrtahanp ptlllpvahm ldsgdpadla flrrafprlr
      541 awfswlhhsq agpvplsyrw rgrdpalptl lnpktlpsgl ddyprashps aserhldlwc
      601 wvalgsrvlm rlaeqlgeae aaaelgplaa sleaeeslde lhwapelgvf adfgnhtkav
      661 qlkprppqgl mrvvgrphph lqfvdalgyv slfpfllrll dpssprlgpm ldvladrrql
      721 wspfglrsla asspfysqrn sehdppywrg avwlnvnyla lgalhyyghl egphqaraar
      781 lhrelranlv gnvrrqyqat gflweqysdq dgrgmgcrpf qgwtslvlla maedy
//
LOCUS       XP_061011762             766 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 142 isoform X1 [Dama dama].
ACCESSION   XP_061011762
VERSION     XP_061011762.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155779.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..766
                     /product="coiled-coil domain-containing protein 142
                     isoform X1"
                     /calculated_mol_wt=83379
     Region          324..742
                     /region_name="CCDC142"
                     /note="Coiled-coil protein 142; pfam14923"
                     /db_xref="CDD:464379"
     CDS             1..766
                     /gene="CCDC142"
                     /coded_by="XM_061155779.1:1..2301"
                     /db_xref="GeneID:133065094"
ORIGIN      
        1 maqasrsggl lpplaavpps raqsrgaeee qwqrkragal rgdvrgwpgl pvarstlclg
       61 prpdgapker prgaapadag erseagavdw grelapggli ppalrrlrav llrlqrereq
      121 llqardcalh lqaavrllri lspgapspsh rpllqlcrdl lqhlsggavl rsslletphp
      181 lllarpvgla aqrldatvem rlralgrapa tpalssqlan llltlpayhq lqgkalsqvp
      241 vsarpyppgr vlrlltgerg cqvagwldea lrgsglrdql lrrcqeerel lpgllgllgg
      301 vagsasgelg lggagalwsq ywtllwaaca qsldlslgpw rdpraaaqql sqalgqaslp
      361 qecekelasl crnlihqsli wswdqgfcqv lgsasgnqss lpssscttkl lqqlfpplld
      421 alrepksglf lcgqpgpapl alglctlqtt llwfwsttqq hlaawapgsf llliqkelpp
      481 llqeaealsr laseeslald veqqlgleir kltvqiqllp eeslslffqe chkqatqdfe
      541 lhmprgrywr hrlcpdlpsi pseyaglvvr rvlepvlqgl hglppqaqap alsqaltail
      601 gawldhilsh girfslqgal qlrqdfgvvr dlleeerwgl spelrqtlfm lsifqrldga
      661 llcllqqplp ktqvrrglpr ccacnevqtt elpssslnsl enlepplrpg vfptqtaqll
      721 stlwgggpsp eaylvgnqea wlalrqhqhp rwhlsflscl gtsset
//
LOCUS       XP_061011763             756 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 142 isoform X2 [Dama dama].
ACCESSION   XP_061011763
VERSION     XP_061011763.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155780.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..756
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..756
                     /product="coiled-coil domain-containing protein 142
                     isoform X2"
                     /calculated_mol_wt=82053
     Region          324..732
                     /region_name="CCDC142"
                     /note="Coiled-coil protein 142; pfam14923"
                     /db_xref="CDD:464379"
     CDS             1..756
                     /gene="CCDC142"
                     /coded_by="XM_061155780.1:1..2271"
                     /db_xref="GeneID:133065094"
ORIGIN      
        1 maqasrsggl lpplaavpps raqsrgaeee qwqrkragal rgdvrgwpgl pvarstlclg
       61 prpdgapker prgaapadag erseagavdw grelapggli ppalrrlrav llrlqrereq
      121 llqardcalh lqaavrllri lspgapspsh rpllqlcrdl lqhlsggavl rsslletphp
      181 lllarpvgla aqrldatvem rlralgrapa tpalssqlan llltlpayhq lqgkalsqvp
      241 vsarpyppgr vlrlltgerg cqvagwldea lrgsglrdql lrrcqeerel lpgllgllgg
      301 vagsasgelg lggagalwsq ywtllwaaca qsldlslgpw rdpraaaqql sqalgqaslp
      361 qecekelasl crnlihqsli wswdqgfcqv lgsasgnqss lpssscttkl lqqlfpplld
      421 alrepksglf lcgqpgpapl alglctlqtt llwfwsttqq hlaawapgsf llliqkelpp
      481 llqeaealsr laseeslald veqqlgleir kltvqiqllp eeslslffqe chkqatqdfe
      541 lhmprdlpsi pseyaglvvr rvlepvlqgl hglppqaqap alsqaltail gawldhilsh
      601 girfslqgal qlrqdfgvvr dlleeerwgl spelrqtlfm lsifqrldga llcllqqplp
      661 ktqvrrglpr ccacnevqtt elpssslnsl enlepplrpg vfptqtaqll stlwgggpsp
      721 eaylvgnqea wlalrqhqhp rwhlsflscl gtsset
//
LOCUS       XP_061011764             737 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 142 isoform X3 [Dama dama].
ACCESSION   XP_061011764
VERSION     XP_061011764.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155781.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..737
                     /product="coiled-coil domain-containing protein 142
                     isoform X3"
                     /calculated_mol_wt=79998
     Region          324..713
                     /region_name="CCDC142"
                     /note="Coiled-coil protein 142; pfam14923"
                     /db_xref="CDD:464379"
     CDS             1..737
                     /gene="CCDC142"
                     /coded_by="XM_061155781.1:1..2214"
                     /db_xref="GeneID:133065094"
ORIGIN      
        1 maqasrsggl lpplaavpps raqsrgaeee qwqrkragal rgdvrgwpgl pvarstlclg
       61 prpdgapker prgaapadag erseagavdw grelapggli ppalrrlrav llrlqrereq
      121 llqardcalh lqaavrllri lspgapspsh rpllqlcrdl lqhlsggavl rsslletphp
      181 lllarpvgla aqrldatvem rlralgrapa tpalssqlan llltlpayhq lqgkalsqvp
      241 vsarpyppgr vlrlltgerg cqvagwldea lrgsglrdql lrrcqeerel lpgllgllgg
      301 vagsasgelg lggagalwsq ywtllwaaca qsldlslgpw rdpraaaqql sqalgqgfcq
      361 vlgsasgnqs slpssscttk llqqlfppll dalrepksgl flcgqpgpap lalglctlqt
      421 tllwfwsttq qhlaawapgs fllliqkelp pllqeaeals rlaseeslal dveqqlglei
      481 rkltvqiqll peeslslffq echkqatqdf elhmprgryw rhrlcpdlps ipseyaglvv
      541 rrvlepvlqg lhglppqaqa palsqaltai lgawldhils hgirfslqga lqlrqdfgvv
      601 rdlleeerwg lspelrqtlf mlsifqrldg allcllqqpl pktqvrrglp rccacnevqt
      661 telpssslns lenlepplrp gvfptqtaql lstlwgggps peaylvgnqe awlalrqhqh
      721 prwhlsflsc lgtsset
//
LOCUS       XP_061011765             137 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 31 isoform X1 [Dama dama].
ACCESSION   XP_061011765
VERSION     XP_061011765.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155782.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..137
                     /product="tetratricopeptide repeat protein 31 isoform X1"
                     /calculated_mol_wt=14478
     CDS             1..137
                     /gene="TTC31"
                     /coded_by="XM_061155782.1:99..512"
                     /db_xref="GeneID:133065095"
ORIGIN      
        1 mdslalrkrm lppstkmaay avslrpwpls ntllsfilas lltgmapipk tagliklgkq
       61 aflcglaarw gsllspntag ysvlraeapp rlspgllaaa lqqsqelatg pakrnpwaac
      121 lrqpnssihf smlswgl
//
LOCUS       XP_061011766             132 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 31 isoform X2 [Dama dama].
ACCESSION   XP_061011766
VERSION     XP_061011766.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155783.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..132
                     /product="tetratricopeptide repeat protein 31 isoform X2"
                     /calculated_mol_wt=13994
     CDS             1..132
                     /gene="TTC31"
                     /coded_by="XM_061155783.1:99..497"
                     /db_xref="GeneID:133065095"
ORIGIN      
        1 mdslalrkrm lppstkmaay avslrpwpls ntllsfilas lltgmapipk tagliklgkq
       61 visrtagscl ttepgagkvg yqlcskwflp qghgpvhlsl eaqppgplvg llnpvwqnav
      121 chyklchlgq is
//
LOCUS       XP_061011767             131 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 31 isoform X3 [Dama dama].
ACCESSION   XP_061011767
VERSION     XP_061011767.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155784.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..131
                     /product="tetratricopeptide repeat protein 31 isoform X3"
                     /calculated_mol_wt=13876
     CDS             1..131
                     /gene="TTC31"
                     /coded_by="XM_061155784.1:99..494"
                     /db_xref="GeneID:133065095"
ORIGIN      
        1 mdslalrkrm lppstkmaay avslrpwpls ntllsfilas lltgmapipk tagliklgkq
       61 aflcglaarw gsllspntag ysvlraeapp rlspgllaaa lqqsqelasl lnpvwqnavc
      121 hyklchlgqi s
//
LOCUS       XP_061011768             129 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 31 isoform X4 [Dama dama].
ACCESSION   XP_061011768
VERSION     XP_061011768.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155785.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..129
                     /product="tetratricopeptide repeat protein 31 isoform X4"
                     /calculated_mol_wt=13643
     CDS             1..129
                     /gene="TTC31"
                     /coded_by="XM_061155785.1:99..488"
                     /db_xref="GeneID:133065095"
ORIGIN      
        1 mdslalrkrm lppstkmaay avslrpwpls ntllsfilas lltgmapipk tagliklgkq
       61 aflcglaarw gsllspntag ysvlraeapp rlspgllaaa lqqsqelswv pallkmvstt
      121 rpwscspes
//
LOCUS       XP_061011769             129 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 31 isoform X4 [Dama dama].
ACCESSION   XP_061011769
VERSION     XP_061011769.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155786.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..129
                     /product="tetratricopeptide repeat protein 31 isoform X4"
                     /calculated_mol_wt=13643
     CDS             1..129
                     /gene="TTC31"
                     /coded_by="XM_061155786.1:99..488"
                     /db_xref="GeneID:133065095"
ORIGIN      
        1 mdslalrkrm lppstkmaay avslrpwpls ntllsfilas lltgmapipk tagliklgkq
       61 aflcglaarw gsllspntag ysvlraeapp rlspgllaaa lqqsqelswv pallkmvstt
      121 rpwscspes
//
LOCUS       XP_061011770             128 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 31 isoform X5 [Dama dama].
ACCESSION   XP_061011770
VERSION     XP_061011770.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155787.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..128
                     /product="tetratricopeptide repeat protein 31 isoform X5"
                     /calculated_mol_wt=13512
     CDS             1..128
                     /gene="TTC31"
                     /coded_by="XM_061155787.1:99..485"
                     /db_xref="GeneID:133065095"
ORIGIN      
        1 mdslalrkrm lppstkmaay avslrpwpls ntllsfilas lltgmapipk tagliklgkq
       61 aflcglaarw gsllspntag ysvlraeapp rlspgllaaa lqqsqelakl gtsfaqngfy
      121 hkamvlft
//
LOCUS       XP_061011771             128 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 31 isoform X5 [Dama dama].
ACCESSION   XP_061011771
VERSION     XP_061011771.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155788.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..128
                     /product="tetratricopeptide repeat protein 31 isoform X5"
                     /calculated_mol_wt=13512
     CDS             1..128
                     /gene="TTC31"
                     /coded_by="XM_061155788.1:99..485"
                     /db_xref="GeneID:133065095"
ORIGIN      
        1 mdslalrkrm lppstkmaay avslrpwpls ntllsfilas lltgmapipk tagliklgkq
       61 aflcglaarw gsllspntag ysvlraeapp rlspgllaaa lqqsqelakl gtsfaqngfy
      121 hkamvlft
//
LOCUS       XP_061011772             128 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 31 isoform X5 [Dama dama].
ACCESSION   XP_061011772
VERSION     XP_061011772.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155789.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..128
                     /product="tetratricopeptide repeat protein 31 isoform X5"
                     /calculated_mol_wt=13512
     CDS             1..128
                     /gene="TTC31"
                     /coded_by="XM_061155789.1:99..485"
                     /db_xref="GeneID:133065095"
ORIGIN      
        1 mdslalrkrm lppstkmaay avslrpwpls ntllsfilas lltgmapipk tagliklgkq
       61 aflcglaarw gsllspntag ysvlraeapp rlspgllaaa lqqsqelakl gtsfaqngfy
      121 hkamvlft
//
LOCUS       XP_061011773             110 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 31 isoform X6 [Dama dama].
ACCESSION   XP_061011773
VERSION     XP_061011773.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155790.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..110
                     /product="tetratricopeptide repeat protein 31 isoform X6"
                     /calculated_mol_wt=11477
     CDS             1..110
                     /gene="TTC31"
                     /coded_by="XM_061155790.1:99..431"
                     /db_xref="GeneID:133065095"
ORIGIN      
        1 mdslalrkrm lppstkmaay avslrpwpls ntllsfilas lltgmapipk tagliklgkq
       61 visrtagscl ttepgagkvg yqlcskwflp qghgpvhlsl eaqppgplas
//
LOCUS       XP_061011775             112 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein mL53 [Dama dama].
ACCESSION   XP_061011775
VERSION     XP_061011775.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155792.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..112
                     /product="large ribosomal subunit protein mL53"
                     /calculated_mol_wt=12014
     Region          20..71
                     /region_name="MRP_L53"
                     /note="39S ribosomal protein L53/MRP-L53; pfam10780"
                     /db_xref="CDD:463186"
     CDS             1..112
                     /gene="MRPL53"
                     /coded_by="XM_061155792.1:145..483"
                     /db_xref="GeneID:133065098"
ORIGIN      
        1 maaalarlgl rsvkqvrvqf cpfeknvest rtflqavsse kvrctnlncs viadvrhdgs
       61 epcvdvlfgd ghrlimrgah ltaremltaf tshiqargva asgdkqsast gr
//
LOCUS       XP_061011776             199 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor LBX2 [Dama dama].
ACCESSION   XP_061011776
VERSION     XP_061011776.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155793.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..199
                     /product="transcription factor LBX2"
                     /calculated_mol_wt=21517
     Region          89..145
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..199
                     /gene="LBX2"
                     /coded_by="XM_061155793.1:66..665"
                     /db_xref="GeneID:133065099"
ORIGIN      
        1 mssgseprtp rtpgtpfsia dilgpcnipr rpsvsrppes nqgptsplca leeltsktfr
       61 gldghtpqps egraapgalg pdpagrrrrk srtaftaqqv lelerrfvfq kylapserdg
      121 laarlglana qvvtwfqnrr aklkrdveem radlaslrsl speaqgrlal pdgapglgpr
      181 parpdselhl sdeeiqvdd
//
LOCUS       XP_061011777             719 aa            linear   MAM 02-DEC-2023
DEFINITION  ATP-dependent RNA helicase DQX1 isoform X1 [Dama dama].
ACCESSION   XP_061011777
VERSION     XP_061011777.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155794.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..719
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..719
                     /product="ATP-dependent RNA helicase DQX1 isoform X1"
                     /calculated_mol_wt=79194
     Region          44..>617
                     /region_name="HrpA"
                     /note="HrpA-like RNA helicase [Translation, ribosomal
                     structure and biogenesis]; COG1643"
                     /db_xref="CDD:441249"
     Region          45..224
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            order(72..78,170)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350744"
     Region          593..676
                     /region_name="OB_NTP_bind"
                     /note="Oligonucleotide/oligosaccharide-binding (OB)-fold;
                     pfam07717"
                     /db_xref="CDD:400182"
     CDS             1..719
                     /gene="DQX1"
                     /coded_by="XM_061155794.1:155..2314"
                     /db_xref="GeneID:133065100"
ORIGIN      
        1 masqllglee esgpnpgese lavnpfdglp fssryyelle qrrslpiwaa rfifleqles
       61 spsgvvlvsg epgcgkstqi pqwcaefvla rgfqkgwvtv tqpyplaals lalrvademd
      121 ltlghevgys ipqedctgpd tllrfcwdrl llqemastrg tgargvlvld eaqersvasd
      181 llqgllqdar lgslpgdlrv vvvtdptlep klqdfwgnpp tvcvpretgr cptpvyrdsf
      241 ptdrveaacq avlelcrkea pgdvlvylps eeeislcces lsrkvgslgn qgppprvlpl
      301 hpgcgravqa vyedtelgar kvvvthwlad fsfslpsirh vidsglelrs vyspqiraes
      361 qvlrpvskcq aearrlraag ippgsclcly pksfleveap clpqprvwae nlsplmlllk
      421 rrqiaepgrc hfldrpapea lmqaledldy laaldddgdl sdlgvilsef plapelakal
      481 lascefdcvd emltlaamlt aapgftrppl caeeaalrra lehvdgdhss liqvyeafiq
      541 sgadkawcqa rglnwaalcq arklrgelle lmqrielpls qpafgseqnr rdlqkalvsg
      601 yflkvardtd gtgnylllth khvaqlsphc cyrsrrapar pplwvlyhsf siakdnclsi
      661 vseiqpqmlv elappyflsn lppsesrdfl nqlreemtds strsessstq elenacvlq
//
LOCUS       XP_061011778             719 aa            linear   MAM 02-DEC-2023
DEFINITION  ATP-dependent RNA helicase DQX1 isoform X1 [Dama dama].
ACCESSION   XP_061011778
VERSION     XP_061011778.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155795.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..719
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..719
                     /product="ATP-dependent RNA helicase DQX1 isoform X1"
                     /calculated_mol_wt=79194
     Region          44..>617
                     /region_name="HrpA"
                     /note="HrpA-like RNA helicase [Translation, ribosomal
                     structure and biogenesis]; COG1643"
                     /db_xref="CDD:441249"
     Region          45..224
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            order(72..78,170)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350744"
     Region          593..676
                     /region_name="OB_NTP_bind"
                     /note="Oligonucleotide/oligosaccharide-binding (OB)-fold;
                     pfam07717"
                     /db_xref="CDD:400182"
     CDS             1..719
                     /gene="DQX1"
                     /coded_by="XM_061155795.1:242..2401"
                     /db_xref="GeneID:133065100"
ORIGIN      
        1 masqllglee esgpnpgese lavnpfdglp fssryyelle qrrslpiwaa rfifleqles
       61 spsgvvlvsg epgcgkstqi pqwcaefvla rgfqkgwvtv tqpyplaals lalrvademd
      121 ltlghevgys ipqedctgpd tllrfcwdrl llqemastrg tgargvlvld eaqersvasd
      181 llqgllqdar lgslpgdlrv vvvtdptlep klqdfwgnpp tvcvpretgr cptpvyrdsf
      241 ptdrveaacq avlelcrkea pgdvlvylps eeeislcces lsrkvgslgn qgppprvlpl
      301 hpgcgravqa vyedtelgar kvvvthwlad fsfslpsirh vidsglelrs vyspqiraes
      361 qvlrpvskcq aearrlraag ippgsclcly pksfleveap clpqprvwae nlsplmlllk
      421 rrqiaepgrc hfldrpapea lmqaledldy laaldddgdl sdlgvilsef plapelakal
      481 lascefdcvd emltlaamlt aapgftrppl caeeaalrra lehvdgdhss liqvyeafiq
      541 sgadkawcqa rglnwaalcq arklrgelle lmqrielpls qpafgseqnr rdlqkalvsg
      601 yflkvardtd gtgnylllth khvaqlsphc cyrsrrapar pplwvlyhsf siakdnclsi
      661 vseiqpqmlv elappyflsn lppsesrdfl nqlreemtds strsessstq elenacvlq
//
LOCUS       XP_061011779             703 aa            linear   MAM 02-DEC-2023
DEFINITION  ATP-dependent RNA helicase DQX1 isoform X2 [Dama dama].
ACCESSION   XP_061011779
VERSION     XP_061011779.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155796.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..703
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..703
                     /product="ATP-dependent RNA helicase DQX1 isoform X2"
                     /calculated_mol_wt=77437
     Region          44..>617
                     /region_name="HrpA"
                     /note="HrpA-like RNA helicase [Translation, ribosomal
                     structure and biogenesis]; COG1643"
                     /db_xref="CDD:441249"
     Region          45..224
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            order(72..78,170)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350744"
     Region          593..667
                     /region_name="OB_NTP_bind"
                     /note="Oligonucleotide/oligosaccharide-binding (OB)-fold;
                     pfam07717"
                     /db_xref="CDD:400182"
     CDS             1..703
                     /gene="DQX1"
                     /coded_by="XM_061155796.1:155..2266"
                     /db_xref="GeneID:133065100"
ORIGIN      
        1 masqllglee esgpnpgese lavnpfdglp fssryyelle qrrslpiwaa rfifleqles
       61 spsgvvlvsg epgcgkstqi pqwcaefvla rgfqkgwvtv tqpyplaals lalrvademd
      121 ltlghevgys ipqedctgpd tllrfcwdrl llqemastrg tgargvlvld eaqersvasd
      181 llqgllqdar lgslpgdlrv vvvtdptlep klqdfwgnpp tvcvpretgr cptpvyrdsf
      241 ptdrveaacq avlelcrkea pgdvlvylps eeeislcces lsrkvgslgn qgppprvlpl
      301 hpgcgravqa vyedtelgar kvvvthwlad fsfslpsirh vidsglelrs vyspqiraes
      361 qvlrpvskcq aearrlraag ippgsclcly pksfleveap clpqprvwae nlsplmlllk
      421 rrqiaepgrc hfldrpapea lmqaledldy laaldddgdl sdlgvilsef plapelakal
      481 lascefdcvd emltlaamlt aapgftrppl caeeaalrra lehvdgdhss liqvyeafiq
      541 sgadkawcqa rglnwaalcq arklrgelle lmqrielpls qpafgseqnr rdlqkalvsg
      601 yflkvardtd gtgnylllth khvaqlsphc cyrsrrapar pplwvlyhsf siakdnclsi
      661 vseiqpqies rdflnqlree mtdsstrses sstqelenac vlq
//
LOCUS       XP_061011780             682 aa            linear   MAM 02-DEC-2023
DEFINITION  ATP-dependent RNA helicase DQX1 isoform X3 [Dama dama].
ACCESSION   XP_061011780
VERSION     XP_061011780.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155797.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..682
                     /product="ATP-dependent RNA helicase DQX1 isoform X3"
                     /calculated_mol_wt=75128
     Region          7..>580
                     /region_name="HrpA"
                     /note="HrpA-like RNA helicase [Translation, ribosomal
                     structure and biogenesis]; COG1643"
                     /db_xref="CDD:441249"
     Region          8..187
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            order(35..41,133)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350744"
     Region          556..639
                     /region_name="OB_NTP_bind"
                     /note="Oligonucleotide/oligosaccharide-binding (OB)-fold;
                     pfam07717"
                     /db_xref="CDD:400182"
     CDS             1..682
                     /gene="DQX1"
                     /coded_by="XM_061155797.1:210..2258"
                     /db_xref="GeneID:133065100"
ORIGIN      
        1 mgdqrrslpi waarfifleq lesspsgvvl vsgepgcgks tqipqwcaef vlargfqkgw
       61 vtvtqpypla alslalrvad emdltlghev gysipqedct gpdtllrfcw drlllqemas
      121 trgtgargvl vldeaqersv asdllqgllq darlgslpgd lrvvvvtdpt lepklqdfwg
      181 npptvcvpre tgrcptpvyr dsfptdrvea acqavlelcr keapgdvlvy lpseeeislc
      241 ceslsrkvgs lgnqgppprv lplhpgcgra vqavyedtel garkvvvthw ladfsfslps
      301 irhvidsgle lrsvyspqir aesqvlrpvs kcqaearrlr aagippgscl clypksflev
      361 eapclpqprv waenlsplml llkrrqiaep grchfldrpa pealmqaled ldylaalddd
      421 gdlsdlgvil sefplapela kallascefd cvdemltlaa mltaapgftr pplcaeeaal
      481 rralehvdgd hssliqvyea fiqsgadkaw cqarglnwaa lcqarklrge llelmqriel
      541 plsqpafgse qnrrdlqkal vsgyflkvar dtdgtgnyll lthkhvaqls phccyrsrra
      601 parpplwvly hsfsiakdnc lsivseiqpq mlvelappyf lsnlppsesr dflnqlreem
      661 tdsstrsess stqelenacv lq
//
LOCUS       XP_061011781             615 aa            linear   MAM 02-DEC-2023
DEFINITION  ATP-dependent RNA helicase DQX1 isoform X4 [Dama dama].
ACCESSION   XP_061011781
VERSION     XP_061011781.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155798.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..615
                     /product="ATP-dependent RNA helicase DQX1 isoform X4"
                     /calculated_mol_wt=67188
     Region          44..>563
                     /region_name="HrpA"
                     /note="HrpA-like RNA helicase [Translation, ribosomal
                     structure and biogenesis]; COG1643"
                     /db_xref="CDD:441249"
     Region          45..224
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            order(72..78,170)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350744"
     CDS             1..615
                     /gene="DQX1"
                     /coded_by="XM_061155798.1:155..2002"
                     /db_xref="GeneID:133065100"
ORIGIN      
        1 masqllglee esgpnpgese lavnpfdglp fssryyelle qrrslpiwaa rfifleqles
       61 spsgvvlvsg epgcgkstqi pqwcaefvla rgfqkgwvtv tqpyplaals lalrvademd
      121 ltlghevgys ipqedctgpd tllrfcwdrl llqemastrg tgargvlvld eaqersvasd
      181 llqgllqdar lgslpgdlrv vvvtdptlep klqdfwgnpp tvcvpretgr cptpvyrdsf
      241 ptdrveaacq avlelcrkea pgdvlvylps eeeislcces lsrkvgslgn qgppprvlpl
      301 hpgcgravqa vyedtelgar kvvvthwlad fsfslpsirh vidsglelrs vyspqiraes
      361 qvlrpvskcq aearrlraag ippgsclcly pksfleveap clpqprvwae nlsplmlllk
      421 rrqiaepgrc hfldrpapea lmqaledldy laaldddgdl sdlgvilsef plapelakal
      481 lascefdcvd emltlaamlt aapgftrppl caeeaalrra lehvdgdhss liqvyeafiq
      541 sgadkawcqa rglnwaalcq arklrgelle lmqrielpls qpafgseqnr rdlqkalvsg
      601 yflkaggigs silpe
//
LOCUS       XP_061011782             601 aa            linear   MAM 02-DEC-2023
DEFINITION  ATP-dependent RNA helicase DQX1 isoform X5 [Dama dama].
ACCESSION   XP_061011782
VERSION     XP_061011782.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155799.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..601
                     /product="ATP-dependent RNA helicase DQX1 isoform X5"
                     /calculated_mol_wt=66283
     Region          <1..106
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Region          123..272
                     /region_name="SF2_C_RHA"
                     /note="C-terminal helicase domain of the RNA helicase A
                     (RHA) family helicases; cd18791"
                     /db_xref="CDD:350178"
     Site            order(194,214,216,218,262)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350178"
     Region          <349..414
                     /region_name="HA2"
                     /note="Helicase associated domain (HA2) Add an annotation;
                     smart00847"
                     /db_xref="CDD:214852"
     Region          475..558
                     /region_name="OB_NTP_bind"
                     /note="Oligonucleotide/oligosaccharide-binding (OB)-fold;
                     pfam07717"
                     /db_xref="CDD:400182"
     CDS             1..601
                     /gene="DQX1"
                     /coded_by="XM_061155799.1:237..2042"
                     /db_xref="GeneID:133065100"
ORIGIN      
        1 mdltlghevg ysipqedctg pdtllrfcwd rlllqemast rgtgargvlv ldeaqersva
       61 sdllqgllqd arlgslpgdl rvvvvtdptl epklqdfwgn pptvcvpret grcptpvyrd
      121 sfptdrveaa cqavlelcrk eapgdvlvyl pseeeislcc eslsrkvgsl gnqgppprvl
      181 plhpgcgrav qavyedtelg arkvvvthwl adfsfslpsi rhvidsglel rsvyspqira
      241 esqvlrpvsk cqaearrlra agippgsclc lypksfleve apclpqprvw aenlsplmll
      301 lkrrqiaepg rchfldrpap ealmqaledl dylaaldddg dlsdlgvils efplapelak
      361 allascefdc vdemltlaam ltaapgftrp plcaeeaalr ralehvdgdh ssliqvyeaf
      421 iqsgadkawc qarglnwaal cqarklrgel lelmqrielp lsqpafgseq nrrdlqkalv
      481 sgyflkvard tdgtgnylll thkhvaqlsp hccyrsrrap arpplwvlyh sfsiakdncl
      541 sivseiqpqm lvelappyfl snlppsesrd flnqlreemt dsstrsesss tqelenacvl
      601 q
//
LOCUS       XP_061011783             284 aa            linear   MAM 02-DEC-2023
DEFINITION  T-cell leukemia homeobox protein 2 [Dama dama].
ACCESSION   XP_061011783
VERSION     XP_061011783.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155800.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..284
                     /product="T-cell leukemia homeobox protein 2"
                     /calculated_mol_wt=30225
     Region          158..214
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..284
                     /gene="TLX2"
                     /coded_by="XM_061155800.1:355..1209"
                     /db_xref="GeneID:133065102"
ORIGIN      
        1 mepgvlashn lphhepisfg idqilscpep pgsglgpgra gqghgesaaf sggfhgassy
       61 gpaaslapvp gtsgvgpggv irvpahrplp vqppaggapa vpgpsglgga gglagltfpw
      121 mdsgrryakd rltaalspfs gtrrighpyq nrtppkrkkp rtsfsrsqvl elerrflrqk
      181 ylasaeraal akalrmtdaq vktwfqnrrt kwrrqtaeer eaerhragrl llhlqqdalp
      241 rplrpplppd plclhnsslf alqnlqpwae dnkvasvsgl asvv
//
LOCUS       XP_061011784             218 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133065103 [Dama dama].
ACCESSION   XP_061011784
VERSION     XP_061011784.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155801.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..218
                     /product="uncharacterized protein LOC133065103"
                     /calculated_mol_wt=23841
     CDS             1..218
                     /gene="LOC133065103"
                     /coded_by="XM_061155801.1:1..657"
                     /db_xref="GeneID:133065103"
ORIGIN      
        1 mnlhgrgqss grcalsqprc artpsslasa sgfplphqlp crcrlpqpll fasrwvqpdd
       61 srircgprls aledqislwl sgcdgkrlgn gageleagee dswrepatrt lrpdssprks
      121 vlthsrpask grrtkspqat lgtsltssed pnrhishscf tppkprklcl ervregrwgk
      181 teaaqrpcdl wprtqelgac elcilprdgt pglrapep
//
LOCUS       XP_061011785             791 aa            linear   MAM 02-DEC-2023
DEFINITION  lysyl oxidase homolog 3 isoform X1 [Dama dama].
ACCESSION   XP_061011785
VERSION     XP_061011785.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155802.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..791
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..791
                     /product="lysyl oxidase homolog 3 isoform X1"
                     /calculated_mol_wt=87366
     Region          45..144
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          169..320
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          345..445
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          455..563
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          568..765
                     /region_name="Lysyl_oxidase"
                     /note="Lysyl oxidase; pfam01186"
                     /db_xref="CDD:460102"
     CDS             1..791
                     /gene="LOXL3"
                     /coded_by="XM_061155802.1:96..2471"
                     /db_xref="GeneID:133065104"
ORIGIN      
        1 mrpvgvwrws lwglllrllc spclgsptps aapekragsq glrfrlagfp rkpsegrvei
       61 qragewgtic dddftlqaah vlcrelgfte atgwthsaky gpgtgriwld nlscsgters
      121 vtecasrgwg nsdcthdeda gvickderlp gfsdsnviev ehhlqveevr lrpavgrgrr
      181 plpvteglve vrlpdgwsqv cdkgwtahns hvicgmlgfp sekrvnvafy rklrkraaka
      241 sarrskplgr pvtklkakpk trmgrgpvkr llaqrqqhsf glhgvacvgt eahlslcsle
      301 fyrandttrc pggapavvsc vpsplyaass gqkkqqskpq gearvrlkgg ahpgegrvev
      361 lkagtwgtvc drkwdlqaas vvcrelgfgs arealsgarm gqgmgaihls evrcsgqels
      421 lwkcphknit aedcshsqda gvrcnlpytg vetkirltgg rsrhegrvev qtggpgslrw
      481 glicgddwgt leamvacrql glgyanhglq etwywdsgni tevvmsgvrc tgtelsldqc
      541 ahhgthvtck rtgsrftagv icsetasdll lhsalvqeta yiedrplhml ycaaeencla
      601 ssarsanwpy ghrrllrfss qihnlgradf rpkagrhswv whechghyhs mdifthydil
      661 tpngtkvaeg hkasfcledt ecqedvskry ecanfgeqgi tvgcwdlyrh didcqwidit
      721 dvkpgnyilq vvinpnfeva esdftnnamk cnckydghri wvhnchigda fseeanrrfe
      781 rypgqtsnqv i
//
LOCUS       XP_061011786             783 aa            linear   MAM 02-DEC-2023
DEFINITION  lysyl oxidase homolog 3 isoform X2 [Dama dama].
ACCESSION   XP_061011786
VERSION     XP_061011786.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155803.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..783
                     /product="lysyl oxidase homolog 3 isoform X2"
                     /calculated_mol_wt=86590
     Region          45..144
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          169..312
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          337..437
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          447..555
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          560..757
                     /region_name="Lysyl_oxidase"
                     /note="Lysyl oxidase; pfam01186"
                     /db_xref="CDD:460102"
     CDS             1..783
                     /gene="LOXL3"
                     /coded_by="XM_061155803.1:96..2447"
                     /db_xref="GeneID:133065104"
ORIGIN      
        1 mrpvgvwrws lwglllrllc spclgsptps aapekragsq glrfrlagfp rkpsegrvei
       61 qragewgtic dddftlqaah vlcrelgfte atgwthsaky gpgtgriwld nlscsgters
      121 vtecasrgwg nsdcthdeda gvickderlp gfsdsnviev ehhlqveevr lrpavgrgrr
      181 plpvteglve vrlpdgwsqv cdkgwtahns hvicgmlgfp sekrvnvafy rlfltlllsy
      241 phrklrkraa kasarrskpl grllaqrqqh sfglhgvacv gteahlslcs lefyrandtt
      301 rcpggapavv scvpsplyaa ssgqkkqqsk pqgearvrlk ggahpgegrv evlkagtwgt
      361 vcdrkwdlqa asvvcrelgf gsarealsga rmgqgmgaih lsevrcsgqe lslwkcphkn
      421 itaedcshsq dagvrcnlpy tgvetkirlt ggrsrhegrv evqtggpgsl rwglicgddw
      481 gtleamvacr qlglgyanhg lqetwywdsg nitevvmsgv rctgtelsld qcahhgthvt
      541 ckrtgsrfta gvicsetasd lllhsalvqe tayiedrplh mlycaaeenc lassarsanw
      601 pyghrrllrf ssqihnlgra dfrpkagrhs wvwhechghy hsmdifthyd iltpngtkva
      661 eghkasfcle dtecqedvsk ryecanfgeq gitvgcwdly rhdidcqwid itdvkpgnyi
      721 lqvvinpnfe vaesdftnna mkcnckydgh riwvhnchig dafseeanrr ferypgqtsn
      781 qvi
//
LOCUS       XP_061011787             771 aa            linear   MAM 02-DEC-2023
DEFINITION  lysyl oxidase homolog 3 isoform X3 [Dama dama].
ACCESSION   XP_061011787
VERSION     XP_061011787.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155804.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..771
                     /product="lysyl oxidase homolog 3 isoform X3"
                     /calculated_mol_wt=85135
     Region          45..144
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          169..300
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          325..425
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          435..543
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          548..745
                     /region_name="Lysyl_oxidase"
                     /note="Lysyl oxidase; pfam01186"
                     /db_xref="CDD:460102"
     CDS             1..771
                     /gene="LOXL3"
                     /coded_by="XM_061155804.1:96..2411"
                     /db_xref="GeneID:133065104"
ORIGIN      
        1 mrpvgvwrws lwglllrllc spclgsptps aapekragsq glrfrlagfp rkpsegrvei
       61 qragewgtic dddftlqaah vlcrelgfte atgwthsaky gpgtgriwld nlscsgters
      121 vtecasrgwg nsdcthdeda gvickderlp gfsdsnviev ehhlqveevr lrpavgrgrr
      181 plpvteglve vrlpdgwsqv cdkgwtahns hvicgmlgfp sekrvnvafy rklrkraaka
      241 sarrskplgr llaqrqqhsf glhgvacvgt eahlslcsle fyrandttrc pggapavvsc
      301 vpsplyaass gqkkqqskpq gearvrlkgg ahpgegrvev lkagtwgtvc drkwdlqaas
      361 vvcrelgfgs arealsgarm gqgmgaihls evrcsgqels lwkcphknit aedcshsqda
      421 gvrcnlpytg vetkirltgg rsrhegrvev qtggpgslrw glicgddwgt leamvacrql
      481 glgyanhglq etwywdsgni tevvmsgvrc tgtelsldqc ahhgthvtck rtgsrftagv
      541 icsetasdll lhsalvqeta yiedrplhml ycaaeencla ssarsanwpy ghrrllrfss
      601 qihnlgradf rpkagrhswv whechghyhs mdifthydil tpngtkvaeg hkasfcledt
      661 ecqedvskry ecanfgeqgi tvgcwdlyrh didcqwidit dvkpgnyilq vvinpnfeva
      721 esdftnnamk cnckydghri wvhnchigda fseeanrrfe rypgqtsnqv i
//
LOCUS       XP_061011788             752 aa            linear   MAM 02-DEC-2023
DEFINITION  lysyl oxidase homolog 3 isoform X4 [Dama dama].
ACCESSION   XP_061011788
VERSION     XP_061011788.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155805.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..752
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..752
                     /product="lysyl oxidase homolog 3 isoform X4"
                     /calculated_mol_wt=83003
     Region          45..144
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          169..281
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          306..406
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          416..524
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          529..726
                     /region_name="Lysyl_oxidase"
                     /note="Lysyl oxidase; pfam01186"
                     /db_xref="CDD:460102"
     CDS             1..752
                     /gene="LOXL3"
                     /coded_by="XM_061155805.1:96..2354"
                     /db_xref="GeneID:133065104"
ORIGIN      
        1 mrpvgvwrws lwglllrllc spclgsptps aapekragsq glrfrlagfp rkpsegrvei
       61 qragewgtic dddftlqaah vlcrelgfte atgwthsaky gpgtgriwld nlscsgters
      121 vtecasrgwg nsdcthdeda gvickderlp gfsdsnviev ehhlqveevr lrpavgrgrr
      181 plpvteglve vrlpdgwsqv cdkgwtahns hvicgmlgfp sekrvnvafy rllaqrqqhs
      241 fglhgvacvg teahlslcsl efyrandttr cpggapavvs cvpsplyaas sgqkkqqskp
      301 qgearvrlkg gahpgegrve vlkagtwgtv cdrkwdlqaa svvcrelgfg sarealsgar
      361 mgqgmgaihl sevrcsgqel slwkcphkni taedcshsqd agvrcnlpyt gvetkirltg
      421 grsrhegrve vqtggpgslr wglicgddwg tleamvacrq lglgyanhgl qetwywdsgn
      481 itevvmsgvr ctgtelsldq cahhgthvtc krtgsrftag vicsetasdl llhsalvqet
      541 ayiedrplhm lycaaeencl assarsanwp yghrrllrfs sqihnlgrad frpkagrhsw
      601 vwhechghyh smdifthydi ltpngtkvae ghkasfcled tecqedvskr yecanfgeqg
      661 itvgcwdlyr hdidcqwidi tdvkpgnyil qvvinpnfev aesdftnnam kcnckydghr
      721 iwvhnchigd afseeanrrf erypgqtsnq vi
//
LOCUS       XP_061011789             803 aa            linear   MAM 02-DEC-2023
DEFINITION  lysyl oxidase homolog 3 isoform X5 [Dama dama].
ACCESSION   XP_061011789
VERSION     XP_061011789.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155806.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..803
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..803
                     /product="lysyl oxidase homolog 3 isoform X5"
                     /calculated_mol_wt=88821
     Region          45..144
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          169..332
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          357..457
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          467..575
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          580..777
                     /region_name="Lysyl_oxidase"
                     /note="Lysyl oxidase; pfam01186"
                     /db_xref="CDD:460102"
     CDS             1..803
                     /gene="LOXL3"
                     /coded_by="XM_061155806.1:598..3009"
                     /db_xref="GeneID:133065104"
ORIGIN      
        1 mrpvgvwrws lwglllrllc spclgsptps aapekragsq glrfrlagfp rkpsegrvei
       61 qragewgtic dddftlqaah vlcrelgfte atgwthsaky gpgtgriwld nlscsgters
      121 vtecasrgwg nsdcthdeda gvickderlp gfsdsnviev ehhlqveevr lrpavgrgrr
      181 plpvteglve vrlpdgwsqv cdkgwtahns hvicgmlgfp sekrvnvafy rlfltlllsy
      241 phrklrkraa kasarrskpl grpvtklkak pktrmgrgpv krllaqrqqh sfglhgvacv
      301 gteahlslcs lefyrandtt rcpggapavv scvpsplyaa ssgqkkqqsk pqgearvrlk
      361 ggahpgegrv evlkagtwgt vcdrkwdlqa asvvcrelgf gsarealsga rmgqgmgaih
      421 lsevrcsgqe lslwkcphkn itaedcshsq dagvrcnlpy tgvetkirlt ggrsrhegrv
      481 evqtggpgsl rwglicgddw gtleamvacr qlglgyanhg lqetwywdsg nitevvmsgv
      541 rctgtelsld qcahhgthvt ckrtgsrfta gvicsetasd lllhsalvqe tayiedrplh
      601 mlycaaeenc lassarsanw pyghrrllrf ssqihnlgra dfrpkagrhs wvwhechghy
      661 hsmdifthyd iltpngtkva eghkasfcle dtecqedvsk ryecanfgeq gitvgcwdly
      721 rhdidcqwid itdvkpgnyi lqvvinpnfe vaesdftnna mkcnckydgh riwvhnchig
      781 dafseeanrr ferypgqtsn qvi
//
LOCUS       XP_061011790             803 aa            linear   MAM 02-DEC-2023
DEFINITION  lysyl oxidase homolog 3 isoform X5 [Dama dama].
ACCESSION   XP_061011790
VERSION     XP_061011790.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155807.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..803
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..803
                     /product="lysyl oxidase homolog 3 isoform X5"
                     /calculated_mol_wt=88821
     Region          45..144
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          169..332
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          357..457
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          467..575
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          580..777
                     /region_name="Lysyl_oxidase"
                     /note="Lysyl oxidase; pfam01186"
                     /db_xref="CDD:460102"
     CDS             1..803
                     /gene="LOXL3"
                     /coded_by="XM_061155807.1:219..2630"
                     /db_xref="GeneID:133065104"
ORIGIN      
        1 mrpvgvwrws lwglllrllc spclgsptps aapekragsq glrfrlagfp rkpsegrvei
       61 qragewgtic dddftlqaah vlcrelgfte atgwthsaky gpgtgriwld nlscsgters
      121 vtecasrgwg nsdcthdeda gvickderlp gfsdsnviev ehhlqveevr lrpavgrgrr
      181 plpvteglve vrlpdgwsqv cdkgwtahns hvicgmlgfp sekrvnvafy rlfltlllsy
      241 phrklrkraa kasarrskpl grpvtklkak pktrmgrgpv krllaqrqqh sfglhgvacv
      301 gteahlslcs lefyrandtt rcpggapavv scvpsplyaa ssgqkkqqsk pqgearvrlk
      361 ggahpgegrv evlkagtwgt vcdrkwdlqa asvvcrelgf gsarealsga rmgqgmgaih
      421 lsevrcsgqe lslwkcphkn itaedcshsq dagvrcnlpy tgvetkirlt ggrsrhegrv
      481 evqtggpgsl rwglicgddw gtleamvacr qlglgyanhg lqetwywdsg nitevvmsgv
      541 rctgtelsld qcahhgthvt ckrtgsrfta gvicsetasd lllhsalvqe tayiedrplh
      601 mlycaaeenc lassarsanw pyghrrllrf ssqihnlgra dfrpkagrhs wvwhechghy
      661 hsmdifthyd iltpngtkva eghkasfcle dtecqedvsk ryecanfgeq gitvgcwdly
      721 rhdidcqwid itdvkpgnyi lqvvinpnfe vaesdftnna mkcnckydgh riwvhnchig
      781 dafseeanrr ferypgqtsn qvi
//
LOCUS       XP_061011791             803 aa            linear   MAM 02-DEC-2023
DEFINITION  lysyl oxidase homolog 3 isoform X5 [Dama dama].
ACCESSION   XP_061011791
VERSION     XP_061011791.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155808.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..803
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..803
                     /product="lysyl oxidase homolog 3 isoform X5"
                     /calculated_mol_wt=88821
     Region          45..144
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          169..332
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          357..457
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          467..575
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          580..777
                     /region_name="Lysyl_oxidase"
                     /note="Lysyl oxidase; pfam01186"
                     /db_xref="CDD:460102"
     CDS             1..803
                     /gene="LOXL3"
                     /coded_by="XM_061155808.1:154..2565"
                     /db_xref="GeneID:133065104"
ORIGIN      
        1 mrpvgvwrws lwglllrllc spclgsptps aapekragsq glrfrlagfp rkpsegrvei
       61 qragewgtic dddftlqaah vlcrelgfte atgwthsaky gpgtgriwld nlscsgters
      121 vtecasrgwg nsdcthdeda gvickderlp gfsdsnviev ehhlqveevr lrpavgrgrr
      181 plpvteglve vrlpdgwsqv cdkgwtahns hvicgmlgfp sekrvnvafy rlfltlllsy
      241 phrklrkraa kasarrskpl grpvtklkak pktrmgrgpv krllaqrqqh sfglhgvacv
      301 gteahlslcs lefyrandtt rcpggapavv scvpsplyaa ssgqkkqqsk pqgearvrlk
      361 ggahpgegrv evlkagtwgt vcdrkwdlqa asvvcrelgf gsarealsga rmgqgmgaih
      421 lsevrcsgqe lslwkcphkn itaedcshsq dagvrcnlpy tgvetkirlt ggrsrhegrv
      481 evqtggpgsl rwglicgddw gtleamvacr qlglgyanhg lqetwywdsg nitevvmsgv
      541 rctgtelsld qcahhgthvt ckrtgsrfta gvicsetasd lllhsalvqe tayiedrplh
      601 mlycaaeenc lassarsanw pyghrrllrf ssqihnlgra dfrpkagrhs wvwhechghy
      661 hsmdifthyd iltpngtkva eghkasfcle dtecqedvsk ryecanfgeq gitvgcwdly
      721 rhdidcqwid itdvkpgnyi lqvvinpnfe vaesdftnna mkcnckydgh riwvhnchig
      781 dafseeanrr ferypgqtsn qvi
//
LOCUS       XP_061011792             745 aa            linear   MAM 02-DEC-2023
DEFINITION  lysyl oxidase homolog 3 isoform X6 [Dama dama].
ACCESSION   XP_061011792
VERSION     XP_061011792.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155809.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..745
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..745
                     /product="lysyl oxidase homolog 3 isoform X6"
                     /calculated_mol_wt=81748
     Region          112..211
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          236..399
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          424..524
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          534..642
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          647..>728
                     /region_name="Lysyl_oxidase"
                     /note="Lysyl oxidase; pfam01186"
                     /db_xref="CDD:460102"
     CDS             1..745
                     /gene="LOXL3"
                     /coded_by="XM_061155809.1:301..2538"
                     /db_xref="GeneID:133065104"
ORIGIN      
        1 mptgtlghwr dflglrgfss pdltrlllrg rwaiyvlgli yrtktllpaa rvpvqpkslw
       61 gtqafpamrp vgvwrwslwg lllrllcspc lgsptpsaap ekragsqglr frlagfprkp
      121 segrveiqra gewgticddd ftlqaahvlc relgfteatg wthsakygpg tgriwldnls
      181 csgtersvte casrgwgnsd cthdedagvi ckderlpgfs dsnvievehh lqveevrlrp
      241 avgrgrrplp vteglvevrl pdgwsqvcdk gwtahnshvi cgmlgfpsek rvnvafyrlf
      301 ltlllsyphr klrkraakas arrskplgrp vtklkakpkt rmgrgpvkrl laqrqqhsfg
      361 lhgvacvgte ahlslcslef yrandttrcp ggapavvscv psplyaassg qkkqqskpqg
      421 earvrlkgga hpgegrvevl kagtwgtvcd rkwdlqaasv vcrelgfgsa realsgarmg
      481 qgmgaihlse vrcsgqelsl wkcphknita edcshsqdag vrcnlpytgv etkirltggr
      541 srhegrvevq tggpgslrwg licgddwgtl eamvacrqlg lgyanhglqe twywdsgnit
      601 evvmsgvrct gtelsldqca hhgthvtckr tgsrftagvi csetasdlll hsalvqetay
      661 iedrplhmly caaeenclas sarsanwpyg hrrllrfssq ihnlgradfr pkagrhswal
      721 sqyghlhslr ypdpqrhqgg rgpqs
//
LOCUS       XP_061011793             631 aa            linear   MAM 02-DEC-2023
DEFINITION  lysyl oxidase homolog 3 isoform X7 [Dama dama].
ACCESSION   XP_061011793
VERSION     XP_061011793.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155810.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..631
                     /product="lysyl oxidase homolog 3 isoform X7"
                     /calculated_mol_wt=69971
     Region          185..285
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          295..403
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          408..605
                     /region_name="Lysyl_oxidase"
                     /note="Lysyl oxidase; pfam01186"
                     /db_xref="CDD:460102"
     CDS             1..631
                     /gene="LOXL3"
                     /coded_by="XM_061155810.1:5112..7007"
                     /db_xref="GeneID:133065104"
ORIGIN      
        1 mlekktfged ilpytypmkg skllavsqer dprvivdsll gmldvldvla ktilkkkprl
       61 fltlllsyph rklrkraaka sarrskplgr pvtklkakpk trmgrgpvkr llaqrqqhsf
      121 glhgvacvgt eahlslcsle fyrandttrc pggapavvsc vpsplyaass gqkkqqskpq
      181 gearvrlkgg ahpgegrvev lkagtwgtvc drkwdlqaas vvcrelgfgs arealsgarm
      241 gqgmgaihls evrcsgqels lwkcphknit aedcshsqda gvrcnlpytg vetkirltgg
      301 rsrhegrvev qtggpgslrw glicgddwgt leamvacrql glgyanhglq etwywdsgni
      361 tevvmsgvrc tgtelsldqc ahhgthvtck rtgsrftagv icsetasdll lhsalvqeta
      421 yiedrplhml ycaaeencla ssarsanwpy ghrrllrfss qihnlgradf rpkagrhswv
      481 whechghyhs mdifthydil tpngtkvaeg hkasfcledt ecqedvskry ecanfgeqgi
      541 tvgcwdlyrh didcqwidit dvkpgnyilq vvinpnfeva esdftnnamk cnckydghri
      601 wvhnchigda fseeanrrfe rypgqtsnqv i
//
LOCUS       XP_061011794             619 aa            linear   MAM 02-DEC-2023
DEFINITION  lysyl oxidase homolog 3 isoform X8 [Dama dama].
ACCESSION   XP_061011794
VERSION     XP_061011794.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155811.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..619
                     /product="lysyl oxidase homolog 3 isoform X8"
                     /calculated_mol_wt=68516
     Region          173..273
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          283..391
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          396..593
                     /region_name="Lysyl_oxidase"
                     /note="Lysyl oxidase; pfam01186"
                     /db_xref="CDD:460102"
     CDS             1..619
                     /gene="LOXL3"
                     /coded_by="XM_061155811.1:5111..6970"
                     /db_xref="GeneID:133065104"
ORIGIN      
        1 mlekktfged ilpytypmkg skllavsqer dprvivdsll gmldvldvla ktilkkkprk
       61 lrkraakasa rrskplgrpv tklkakpktr mgrgpvkrll aqrqqhsfgl hgvacvgtea
      121 hlslcslefy randttrcpg gapavvscvp splyaassgq kkqqskpqge arvrlkggah
      181 pgegrvevlk agtwgtvcdr kwdlqaasvv crelgfgsar ealsgarmgq gmgaihlsev
      241 rcsgqelslw kcphknitae dcshsqdagv rcnlpytgve tkirltggrs rhegrvevqt
      301 ggpgslrwgl icgddwgtle amvacrqlgl gyanhglqet wywdsgnite vvmsgvrctg
      361 telsldqcah hgthvtckrt gsrftagvic setasdlllh salvqetayi edrplhmlyc
      421 aaeenclass arsanwpygh rrllrfssqi hnlgradfrp kagrhswvwh echghyhsmd
      481 ifthydiltp ngtkvaeghk asfcledtec qedvskryec anfgeqgitv gcwdlyrhdi
      541 dcqwiditdv kpgnyilqvv inpnfevaes dftnnamkcn ckydghriwv hnchigdafs
      601 eeanrrfery pgqtsnqvi
//
LOCUS       XP_061011795             580 aa            linear   MAM 02-DEC-2023
DEFINITION  lysyl oxidase homolog 3 isoform X9 [Dama dama].
ACCESSION   XP_061011795
VERSION     XP_061011795.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155812.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..580
                     /product="lysyl oxidase homolog 3 isoform X9"
                     /calculated_mol_wt=64313
     Region          134..234
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          244..352
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          357..554
                     /region_name="Lysyl_oxidase"
                     /note="Lysyl oxidase; pfam01186"
                     /db_xref="CDD:460102"
     CDS             1..580
                     /gene="LOXL3"
                     /coded_by="XM_061155812.1:572..2314"
                     /db_xref="GeneID:133065104"
ORIGIN      
        1 myltttstnf fllfsdqsps lkpnpkpewa ggqlrarqdf erilslfelq splilsfqrl
       61 laqrqqhsfg lhgvacvgte ahlslcslef yrandttrcp ggapavvscv psplyaassg
      121 qkkqqskpqg earvrlkgga hpgegrvevl kagtwgtvcd rkwdlqaasv vcrelgfgsa
      181 realsgarmg qgmgaihlse vrcsgqelsl wkcphknita edcshsqdag vrcnlpytgv
      241 etkirltggr srhegrvevq tggpgslrwg licgddwgtl eamvacrqlg lgyanhglqe
      301 twywdsgnit evvmsgvrct gtelsldqca hhgthvtckr tgsrftagvi csetasdlll
      361 hsalvqetay iedrplhmly caaeenclas sarsanwpyg hrrllrfssq ihnlgradfr
      421 pkagrhswvw hechghyhsm difthydilt pngtkvaegh kasfcledte cqedvskrye
      481 canfgeqgit vgcwdlyrhd idcqwiditd vkpgnyilqv vinpnfevae sdftnnamkc
      541 nckydghriw vhnchigdaf seeanrrfer ypgqtsnqvi
//
LOCUS       XP_061011796             483 aa            linear   MAM 02-DEC-2023
DEFINITION  docking protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061011796
VERSION     XP_061011796.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155813.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..483
                     /product="docking protein 1 isoform X1"
                     /calculated_mol_wt=51640
     Region          6..119
                     /region_name="PH_DOK1,2,3"
                     /note="Pleckstrin homology (PH) domain of Downstream of
                     tyrosine kinase 1, 2, and 3; cd14676"
                     /db_xref="CDD:270195"
     Region          151..253
                     /region_name="PTB_DOK1_DOK2_DOK3"
                     /note="Downstream of tyrosine kinase 1, 2, and 3 proteins
                     phosphotyrosine-binding domain (PTBi); cd01203"
                     /db_xref="CDD:269914"
     Site            order(161,167)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269914"
     Site            order(203..211,217,221..222,242,249,252)
                     /site_type="other"
                     /note="phosphopeptide binding site [polypeptide binding]"
                     /db_xref="CDD:269914"
     CDS             1..483
                     /gene="DOK1"
                     /coded_by="XM_061155813.1:93..1544"
                     /db_xref="GeneID:133065106"
ORIGIN      
        1 mdgavmegpl flqsqrfgtk rwrktwavly pasphgvarl effdhkgsss gggrgssrrl
       61 dckvirlaec vsvapvaves ppepgaaafr ldtaqrshll aadapssaaw vqtlcqnafp
      121 kgswalapae nppklsalem lenslyspsw egsqfwvtvq kteaaercgl hgsyvlrvea
      181 dkltllaaga qsqileplls wpytllrryg rdkvmfsfea grrcpsgpgt ftfhtaqgnd
      241 ifqavetaih rqktqgkagq gqdvlradsh egevadgkla spaaplelpg sppalyaepl
      301 dslrvppgpg qdalysdpvd stpacagegt qlkkalywdl cehvqqklik akltdpkedp
      361 iydepeglap atlrglydlp qepkdawwcq arvkeegyel pynpatddya vppprstkpf
      421 papkpqgral pesgaaaggg sqghssdtal ysqvqksgal gswdcgppgv gtdrtgakse
      481 gst
//
LOCUS       XP_061011797             477 aa            linear   MAM 02-DEC-2023
DEFINITION  docking protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061011797
VERSION     XP_061011797.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155814.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..477
                     /product="docking protein 1 isoform X2"
                     /calculated_mol_wt=50930
     Region          12..113
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          145..247
                     /region_name="PTB_DOK1_DOK2_DOK3"
                     /note="Downstream of tyrosine kinase 1, 2, and 3 proteins
                     phosphotyrosine-binding domain (PTBi); cd01203"
                     /db_xref="CDD:269914"
     Site            order(155,161)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269914"
     Site            order(197..205,211,215..216,236,243,246)
                     /site_type="other"
                     /note="phosphopeptide binding site [polypeptide binding]"
                     /db_xref="CDD:269914"
     CDS             1..477
                     /gene="DOK1"
                     /coded_by="XM_061155814.1:111..1544"
                     /db_xref="GeneID:133065106"
ORIGIN      
        1 mlctffgeas aglrrwrktw avlypasphg varleffdhk gsssgggrgs srrldckvir
       61 laecvsvapv avesppepga aafrldtaqr shllaadaps saawvqtlcq nafpkgswal
      121 apaenppkls alemlensly spswegsqfw vtvqkteaae rcglhgsyvl rveadkltll
      181 aagaqsqile pllswpytll rrygrdkvmf sfeagrrcps gpgtftfhta qgndifqave
      241 taihrqktqg kagqgqdvlr adshegevad gklaspaapl elpgsppaly aepldslrvp
      301 pgpgqdalys dpvdstpaca gegtqlkkal ywdlcehvqq klikakltdp kedpiydepe
      361 glapatlrgl ydlpqepkda wwcqarvkee gyelpynpat ddyavppprs tkpfpapkpq
      421 gralpesgaa agggsqghss dtalysqvqk sgalgswdcg ppgvgtdrtg aksegst
//
LOCUS       XP_061011798             344 aa            linear   MAM 02-DEC-2023
DEFINITION  docking protein 1 isoform X3 [Dama dama].
ACCESSION   XP_061011798
VERSION     XP_061011798.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155815.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..344
                     /product="docking protein 1 isoform X3"
                     /calculated_mol_wt=36801
     Region          12..114
                     /region_name="PTB_DOK1_DOK2_DOK3"
                     /note="Downstream of tyrosine kinase 1, 2, and 3 proteins
                     phosphotyrosine-binding domain (PTBi); cd01203"
                     /db_xref="CDD:269914"
     Site            order(22,28)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269914"
     Site            order(64..72,78,82..83,103,110,113)
                     /site_type="other"
                     /note="phosphopeptide binding site [polypeptide binding]"
                     /db_xref="CDD:269914"
     CDS             1..344
                     /gene="DOK1"
                     /coded_by="XM_061155815.1:181..1215"
                     /db_xref="GeneID:133065106"
ORIGIN      
        1 mlenslysps wegsqfwvtv qkteaaercg lhgsyvlrve adkltllaag aqsqilepll
       61 swpytllrry grdkvmfsfe agrrcpsgpg tftfhtaqgn difqavetai hrqktqgkag
      121 qgqdvlrads hegevadgkl aspaaplelp gsppalyaep ldslrvppgp gqdalysdpv
      181 dstpacageg tqlkkalywd lcehvqqkli kakltdpked piydepegla patlrglydl
      241 pqepkdawwc qarvkeegye lpynpatddy avppprstkp fpapkpqgra lpesgaaagg
      301 gsqghssdta lysqvqksga lgswdcgppg vgtdrtgaks egst
//
LOCUS       XP_061011799             458 aa            linear   MAM 02-DEC-2023
DEFINITION  serine protease HTRA2, mitochondrial [Dama dama].
ACCESSION   XP_061011799
VERSION     XP_061011799.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155816.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..458
                     /product="serine protease HTRA2, mitochondrial"
                     /calculated_mol_wt=48856
     Region          182..455
                     /region_name="DegQ"
                     /note="Periplasmic serine protease, S1-C subfamily,
                     contain C-terminal PDZ domain [Posttranslational
                     modification, protein turnover, chaperones]; COG0265"
                     /db_xref="CDD:440035"
     CDS             1..458
                     /gene="HTRA2"
                     /coded_by="XM_061155816.1:87..1463"
                     /db_xref="GeneID:133065108"
ORIGIN      
        1 maalragrga gwslrgwral ggghwgkgpl ltpdlrallt sgtsdprtrv tygapsfrtr
       61 lsvgvpeprt clrsrtsdlr arliagtpdp rtpedsgtpg trprlwlava lgaggavlll
      121 fwgggrgppa vlasvlgspp tsprsqynfi advvektapa vvyieilgrh pfsgrevpis
      181 ngsgfvvaad glivtnahvv adrrrvrvrl psgdtyeavv tavdpvadia tlriqtkepl
      241 ptlplgrsad vrqgefvvam gspfalqnti tsgivssaqr pakdlglpqt nveyiqtdaa
      301 idfgnsggpl vnldgevigv ntmkvtagis faipsdrlre flhrgekkns wfgisgsqrr
      361 yigvmmltlt psilaelqlr epsfpdvqhg vlihkvilds pahraglrpg dvilaigeql
      421 vqnaediyea vrtqsqlavr irrgqetltl yvtpevte
//
LOCUS       XP_061011800             444 aa            linear   MAM 02-DEC-2023
DEFINITION  lipid droplet-regulating VLDL assembly factor AUP1 isoform X1 [Dama
            dama].
ACCESSION   XP_061011800
VERSION     XP_061011800.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155817.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..444
                     /product="lipid droplet-regulating VLDL assembly factor
                     AUP1 isoform X1"
                     /calculated_mol_wt=49272
     Region          66..264
                     /region_name="LPLAT"
                     /note="Lysophospholipid acyltransferases (LPLATs) of
                     glycerophospholipid biosynthesis; cl17185"
                     /db_xref="CDD:473073"
     Site            order(96,99,101,124,125..126,163..165)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153253"
     Region          296..340
                     /region_name="CUE_AUP1"
                     /note="CUE domain found in ancient ubiquitous protein 1
                     (AUP1) and similar proteins; cd14420"
                     /db_xref="CDD:270603"
     CDS             1..444
                     /gene="AUP1"
                     /coded_by="XM_061155817.1:209..1543"
                     /db_xref="GeneID:133065109"
ORIGIN      
        1 meppsspgpe rlfdshrlpg dgflllalll yapigfcllv lrlflgihvf lvscalpdsv
       61 lrrfvvrtmc avlglvarqe dsglrdhrvr vlisnhvtpf dhnivnllts cstpllnspp
      121 sfvcwsrgfm emdgqgelve slkrfcastr lpptplllfp eeeatngreg llrfsswpfs
      181 iqdvvqpltl rvqrplvsvt vsdaswvsel lwslfvpftv yqvrwlrpvh rqlgegseef
      241 alrvqqlvak elgqtgtrlt padkaehmkr qrhprlrpqs aqssfphspg pspdvhlasl
      301 aqrvkevlph vplgiiqrdl artgcvdlti tnllegavaf mpeditegtq slatastpkf
      361 pssgpatpqp taltfakssw arqeslqerk qalyeyarsv flcptgdsqr grprrlteys
      421 mapraagrrl gkphpprsrp mggr
//
LOCUS       XP_061011801             410 aa            linear   MAM 02-DEC-2023
DEFINITION  lipid droplet-regulating VLDL assembly factor AUP1 isoform X2 [Dama
            dama].
ACCESSION   XP_061011801
VERSION     XP_061011801.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155818.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..410
                     /product="lipid droplet-regulating VLDL assembly factor
                     AUP1 isoform X2"
                     /calculated_mol_wt=45631
     Region          66..264
                     /region_name="LPLAT"
                     /note="Lysophospholipid acyltransferases (LPLATs) of
                     glycerophospholipid biosynthesis; cl17185"
                     /db_xref="CDD:473073"
     Site            order(96,99,101,124,125..126,163..165)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153253"
     Region          296..340
                     /region_name="CUE_AUP1"
                     /note="CUE domain found in ancient ubiquitous protein 1
                     (AUP1) and similar proteins; cd14420"
                     /db_xref="CDD:270603"
     CDS             1..410
                     /gene="AUP1"
                     /coded_by="XM_061155818.1:201..1433"
                     /db_xref="GeneID:133065109"
ORIGIN      
        1 meppsspgpe rlfdshrlpg dgflllalll yapigfcllv lrlflgihvf lvscalpdsv
       61 lrrfvvrtmc avlglvarqe dsglrdhrvr vlisnhvtpf dhnivnllts cstpllnspp
      121 sfvcwsrgfm emdgqgelve slkrfcastr lpptplllfp eeeatngreg llrfsswpfs
      181 iqdvvqpltl rvqrplvsvt vsdaswvsel lwslfvpftv yqvrwlrpvh rqlgegseef
      241 alrvqqlvak elgqtgtrlt padkaehmkr qrhprlrpqs aqssfphspg pspdvhlasl
      301 aqrvkevlph vplgiiqrdl artgcvdlti tnllegavaf mpeditegtq slatastpkf
      361 pssgpatpqp taltfakssw arqeslqerk qalyeyarrr faerqaqead
//
LOCUS       XP_061011802             398 aa            linear   MAM 02-DEC-2023
DEFINITION  lipid droplet-regulating VLDL assembly factor AUP1 isoform X3 [Dama
            dama].
ACCESSION   XP_061011802
VERSION     XP_061011802.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155819.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..398
                     /product="lipid droplet-regulating VLDL assembly factor
                     AUP1 isoform X3"
                     /calculated_mol_wt=44251
     Region          20..218
                     /region_name="LPLAT"
                     /note="Lysophospholipid acyltransferases (LPLATs) of
                     glycerophospholipid biosynthesis; cl17185"
                     /db_xref="CDD:473073"
     Site            order(50,53,55,78,79..80,117..119)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153253"
     Region          250..294
                     /region_name="CUE_AUP1"
                     /note="CUE domain found in ancient ubiquitous protein 1
                     (AUP1) and similar proteins; cd14420"
                     /db_xref="CDD:270603"
     CDS             1..398
                     /gene="AUP1"
                     /coded_by="XM_061155819.1:219..1415"
                     /db_xref="GeneID:133065109"
ORIGIN      
        1 meppsspgpe rlfdshrfvv rtmcavlglv arqedsglrd hrvrvlisnh vtpfdhnivn
       61 lltscstpll nsppsfvcws rgfmemdgqg elveslkrfc astrlpptpl llfpeeeatn
      121 gregllrfss wpfsiqdvvq pltlrvqrpl vsvtvsdasw vsellwslfv pftvyqvrwl
      181 rpvhrqlgeg seefalrvqq lvakelgqtg trltpadkae hmkrqrhprl rpqsaqssfp
      241 hspgpspdvh laslaqrvke vlphvplgii qrdlartgcv dltitnlleg avafmpedit
      301 egtqslatas tpkfpssgpa tpqptaltfa ksswarqesl qerkqalyey arsvflcptg
      361 dsqrgrprrl teysmapraa grrlgkphpp rsrpmggr
//
LOCUS       XP_061011803             373 aa            linear   MAM 02-DEC-2023
DEFINITION  lipid droplet-regulating VLDL assembly factor AUP1 isoform X4 [Dama
            dama].
ACCESSION   XP_061011803
VERSION     XP_061011803.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155820.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..373
                     /product="lipid droplet-regulating VLDL assembly factor
                     AUP1 isoform X4"
                     /calculated_mol_wt=41305
     Region          66..264
                     /region_name="LPLAT"
                     /note="Lysophospholipid acyltransferases (LPLATs) of
                     glycerophospholipid biosynthesis; cl17185"
                     /db_xref="CDD:473073"
     Site            order(96,99,101,124,125..126,163..165)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153253"
     Region          296..340
                     /region_name="CUE_AUP1"
                     /note="CUE domain found in ancient ubiquitous protein 1
                     (AUP1) and similar proteins; cd14420"
                     /db_xref="CDD:270603"
     CDS             1..373
                     /gene="AUP1"
                     /coded_by="XM_061155820.1:206..1327"
                     /db_xref="GeneID:133065109"
ORIGIN      
        1 meppsspgpe rlfdshrlpg dgflllalll yapigfcllv lrlflgihvf lvscalpdsv
       61 lrrfvvrtmc avlglvarqe dsglrdhrvr vlisnhvtpf dhnivnllts cstpllnspp
      121 sfvcwsrgfm emdgqgelve slkrfcastr lpptplllfp eeeatngreg llrfsswpfs
      181 iqdvvqpltl rvqrplvsvt vsdaswvsel lwslfvpftv yqvrwlrpvh rqlgegseef
      241 alrvqqlvak elgqtgtrlt padkaehmkr qrhprlrpqs aqssfphspg pspdvhlasl
      301 aqrvkevlph vplgiiqrdl artgcvdlti tnllegavaf mpeditegtq slatastpka
      361 fdaclmmmts qal
//
LOCUS       XP_061011804             365 aa            linear   MAM 02-DEC-2023
DEFINITION  meiosis 1 arrest protein [Dama dama].
ACCESSION   XP_061011804
VERSION     XP_061011804.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155821.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..365
                     /product="meiosis 1 arrest protein"
                     /calculated_mol_wt=40801
     CDS             1..365
                     /gene="M1AP"
                     /coded_by="XM_061155821.1:185..1282"
                     /db_xref="GeneID:133065110"
ORIGIN      
        1 myhgqiaskr psnptqmyqq pprllivhia lpswadvcsn lcealqnffc lacslmgpsr
       61 iplfslyivq nqhecilpfv qvkgnfarlk aciselrmlq regcfrpqgi slqlaiedgl
      121 qqfkqysrha stgaaltyss leitvltsqp gkevvkqlee glkdtdlvri rklqvveitk
      181 gaiecmnsas pveepsnees pilatdidlq tidsdivsme iffkawlhns gtdqehvhll
      241 lpsrsisnis rtrddsmclk cdlqerllsp sllpgtadgs lrmddpkgdf stlyqmvsqs
      301 sascyklrvi kalkssgvce sltyglpfvl rptscwqlew deletnqqhf halchsllvs
      361 thvtr
//
LOCUS       XP_061011805             771 aa            linear   MAM 02-DEC-2023
DEFINITION  semaphorin-4F isoform X1 [Dama dama].
ACCESSION   XP_061011805
VERSION     XP_061011805.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155822.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..771
                     /product="semaphorin-4F isoform X1"
                     /calculated_mol_wt=83652
     Region          53..512
                     /region_name="Sema_4F"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorin 4F (Sema4F); cd11261"
                     /db_xref="CDD:200522"
     Site            order(115..117,173,194,196..197,199,215,218,220,225,257,
                     281..285,287,366..367,403,407,410)
                     /site_type="other"
                     /note="plexin binding site [polypeptide binding]"
                     /db_xref="CDD:200522"
     Site            order(258..259,261,264..266,300,303..305,307,309,333..335,
                     339..340,416,431)
                     /site_type="other"
                     /note="putative homodimer interface [polypeptide binding]"
                     /db_xref="CDD:200522"
     Region          513..564
                     /region_name="PSI"
                     /note="domain found in Plexins, Semaphorins and Integrins;
                     smart00423"
                     /db_xref="CDD:214655"
     Region          586..771
                     /region_name="Sema4F_C"
                     /note="Semaphorin 4F C-terminal; pfam19428"
                     /db_xref="CDD:437260"
     CDS             1..771
                     /gene="SEMA4F"
                     /coded_by="XM_061155822.1:114..2429"
                     /db_xref="GeneID:133065112"
ORIGIN      
        1 mpaavarllp rlrpsrtspl flllllallr gpasgrvphs vprtslpise adsyltrfai
       61 pqtynysvll vdpashmlyv gardtifavs lpfseerprr idwmvpeahr qncrkkgkke
      121 dechnfvqil aianashllt cgtfafdpkc gvidvssfqq verlesgrgk cpfepaqrsa
      181 avmaggvlya atvknylgte piisravgra edwirtetlp swlnapafva amalrpadwg
      241 dedgddeiyf ffteiarafd syervkvprv arvcagdlgg rktlqqrwtt flkadllcpg
      301 pelgrassvl qdvailrpeh gagtpvfygv fssqwegaai savcsfrpqd irtvlngpfr
      361 elkhdcnrgl pvmdndvpqp rpgecitnnm klqqfgsslf lpdrvltfir dhplmdkpvf
      421 padgrpllvt tdtayvrvva hrvpslsgke ydvlylgted ghlhravrig aqlsvledla
      481 lfpepqpven mklyqtwllv gsrtevtqvn ttncgrlqsc secilardpa cawsvrlaac
      541 vahpgergrl vqdiesadvs slcpeepgeh pvvfevpvaa aahvvlpcsp ssawascvwh
      601 qpsgvtaltr pqeglevvis peamgayace cqeggaarvv aayslvsgts rgplsqahti
      661 gaglagfflg vlaasltlll igrhqqrqrq rellardkvg ldlgvpasgt tsysqdppsp
      721 spederlpla lakrgsgfgg fpppflldpc pspahvrltg aplatcdets i
//
LOCUS       XP_061011806             738 aa            linear   MAM 02-DEC-2023
DEFINITION  semaphorin-4F isoform X2 [Dama dama].
ACCESSION   XP_061011806
VERSION     XP_061011806.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155823.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..738
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..738
                     /product="semaphorin-4F isoform X2"
                     /calculated_mol_wt=80121
     Region          53..479
                     /region_name="Sema"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorins and plexins; cl15693"
                     /db_xref="CDD:472829"
     Region          480..531
                     /region_name="PSI"
                     /note="domain found in Plexins, Semaphorins and Integrins;
                     smart00423"
                     /db_xref="CDD:214655"
     Region          553..738
                     /region_name="Sema4F_C"
                     /note="Semaphorin 4F C-terminal; pfam19428"
                     /db_xref="CDD:437260"
     CDS             1..738
                     /gene="SEMA4F"
                     /coded_by="XM_061155823.1:114..2330"
                     /db_xref="GeneID:133065112"
ORIGIN      
        1 mpaavarllp rlrpsrtspl flllllallr gpasgrvphs vprtslpise adsyltrfai
       61 pqtynysvll vdpashmlyv gardtifavs lpfseerprr idwmvpeahr qncrkkgkke
      121 dvssfqqver lesgrgkcpf epaqrsaavm aggvlyaatv knylgtepii sravgraedw
      181 irtetlpswl napafvaama lrpadwgded gddeiyffft eiarafdsye rvkvprvarv
      241 cagdlggrkt lqqrwttflk adllcpgpel grassvlqdv ailrpehgag tpvfygvfss
      301 qwegaaisav csfrpqdirt vlngpfrelk hdcnrglpvm dndvpqprpg ecitnnmklq
      361 qfgsslflpd rvltfirdhp lmdkpvfpad grpllvttdt ayvrvvahrv pslsgkeydv
      421 lylgtedghl hravrigaql svledlalfp epqpvenmkl yqtwllvgsr tevtqvnttn
      481 cgrlqscsec ilardpacaw svrlaacvah pgergrlvqd iesadvsslc peepgehpvv
      541 fevpvaaaah vvlpcspssa wascvwhqps gvtaltrpqe glevvispea mgayacecqe
      601 ggaarvvaay slvsgtsrgp lsqahtigag lagfflgvla asltllligr hqqrqrqrel
      661 lardkvgldl gvpasgttsy sqdppspspe derlplalak rgsgfggfpp pflldpcpsp
      721 ahvrltgapl atcdetsi
//
LOCUS       XP_061011807             695 aa            linear   MAM 02-DEC-2023
DEFINITION  semaphorin-4F isoform X3 [Dama dama].
ACCESSION   XP_061011807
VERSION     XP_061011807.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155824.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..695
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..695
                     /product="semaphorin-4F isoform X3"
                     /calculated_mol_wt=75350
     Region          2..436
                     /region_name="Sema_4F"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorin 4F (Sema4F); cd11261"
                     /db_xref="CDD:200522"
     Site            order(39..41,97,118,120..121,123,139,142,144,149,181,
                     205..209,211,290..291,327,331,334)
                     /site_type="other"
                     /note="plexin binding site [polypeptide binding]"
                     /db_xref="CDD:200522"
     Site            order(182..183,185,188..190,224,227..229,231,233,257..259,
                     263..264,340,355)
                     /site_type="other"
                     /note="putative homodimer interface [polypeptide binding]"
                     /db_xref="CDD:200522"
     Region          437..488
                     /region_name="PSI"
                     /note="domain found in Plexins, Semaphorins and Integrins;
                     smart00423"
                     /db_xref="CDD:214655"
     Region          510..695
                     /region_name="Sema4F_C"
                     /note="Semaphorin 4F C-terminal; pfam19428"
                     /db_xref="CDD:437260"
     CDS             1..695
                     /gene="SEMA4F"
                     /coded_by="XM_061155824.1:297..2384"
                     /db_xref="GeneID:133065112"
ORIGIN      
        1 mlyvgardti favslpfsee rprridwmvp eahrqncrkk gkkedechnf vqilaianas
       61 hlltcgtfaf dpkcgvidvs sfqqverles grgkcpfepa qrsaavmagg vlyaatvkny
      121 lgtepiisra vgraedwirt etlpswlnap afvaamalrp adwgdedgdd eiyfffteia
      181 rafdsyervk vprvarvcag dlggrktlqq rwttflkadl lcpgpelgra ssvlqdvail
      241 rpehgagtpv fygvfssqwe gaaisavcsf rpqdirtvln gpfrelkhdc nrglpvmdnd
      301 vpqprpgeci tnnmklqqfg sslflpdrvl tfirdhplmd kpvfpadgrp llvttdtayv
      361 rvvahrvpsl sgkeydvlyl gtedghlhra vrigaqlsvl edlalfpepq pvenmklyqt
      421 wllvgsrtev tqvnttncgr lqscsecila rdpacawsvr laacvahpge rgrlvqdies
      481 advsslcpee pgehpvvfev pvaaaahvvl pcspssawas cvwhqpsgvt altrpqegle
      541 vvispeamga yacecqegga arvvaayslv sgtsrgplsq ahtigaglag fflgvlaasl
      601 tllligrhqq rqrqrellar dkvgldlgvp asgttsysqd ppspspeder lplalakrgs
      661 gfggfpppfl ldpcpspahv rltgaplatc detsi
//
LOCUS       XP_061011808             636 aa            linear   MAM 02-DEC-2023
DEFINITION  semaphorin-4F isoform X4 [Dama dama].
ACCESSION   XP_061011808
VERSION     XP_061011808.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155825.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..636
                     /product="semaphorin-4F isoform X4"
                     /calculated_mol_wt=68475
     Region          <35..377
                     /region_name="Sema"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorins and plexins; cl15693"
                     /db_xref="CDD:472829"
     Region          378..429
                     /region_name="PSI"
                     /note="domain found in Plexins, Semaphorins and Integrins;
                     smart00423"
                     /db_xref="CDD:214655"
     Region          451..636
                     /region_name="Sema4F_C"
                     /note="Semaphorin 4F C-terminal; pfam19428"
                     /db_xref="CDD:437260"
     CDS             1..636
                     /gene="SEMA4F"
                     /coded_by="XM_061155825.1:114..2024"
                     /db_xref="GeneID:133065112"
ORIGIN      
        1 mpaavarllp rlrpsrtspl flllllallr gpasgrvphs vprtslpisg gvlyaatvkn
       61 ylgtepiisr avgraedwir tetlpswlna pafvaamalr padwgdedgd deiyffftei
      121 arafdsyerv kvprvarvca gdlggrktlq qrwttflkad llcpgpelgr assvlqdvai
      181 lrpehgagtp vfygvfssqw egaaisavcs frpqdirtvl ngpfrelkhd cnrglpvmdn
      241 dvpqprpgec itnnmklqqf gsslflpdrv ltfirdhplm dkpvfpadgr pllvttdtay
      301 vrvvahrvps lsgkeydvly lgtedghlhr avrigaqlsv ledlalfpep qpvenmklyq
      361 twllvgsrte vtqvnttncg rlqscsecil ardpacawsv rlaacvahpg ergrlvqdie
      421 sadvsslcpe epgehpvvfe vpvaaaahvv lpcspssawa scvwhqpsgv taltrpqegl
      481 evvispeamg ayacecqegg aarvvaaysl vsgtsrgpls qahtigagla gfflgvlaas
      541 ltllligrhq qrqrqrella rdkvgldlgv pasgttsysq dppspspede rlplalakrg
      601 sgfggfpppf lldpcpspah vrltgaplat cdetsi
//
LOCUS       XP_061011809             628 aa            linear   MAM 02-DEC-2023
DEFINITION  semaphorin-4F isoform X5 [Dama dama].
ACCESSION   XP_061011809
VERSION     XP_061011809.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155826.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..628
                     /product="semaphorin-4F isoform X5"
                     /calculated_mol_wt=68881
     Region          53..512
                     /region_name="Sema_4F"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorin 4F (Sema4F); cd11261"
                     /db_xref="CDD:200522"
     Site            order(115..117,173,194,196..197,199,215,218,220,225,257,
                     281..285,287,366..367,403,407,410)
                     /site_type="other"
                     /note="plexin binding site [polypeptide binding]"
                     /db_xref="CDD:200522"
     Site            order(258..259,261,264..266,300,303..305,307,309,333..335,
                     339..340,416,431)
                     /site_type="other"
                     /note="putative homodimer interface [polypeptide binding]"
                     /db_xref="CDD:200522"
     Region          513..564
                     /region_name="PSI"
                     /note="domain found in Plexins, Semaphorins and Integrins;
                     smart00423"
                     /db_xref="CDD:214655"
     Region          586..>628
                     /region_name="Sema4F_C"
                     /note="Semaphorin 4F C-terminal; pfam19428"
                     /db_xref="CDD:437260"
     CDS             1..628
                     /gene="SEMA4F"
                     /coded_by="XM_061155826.1:114..2000"
                     /db_xref="GeneID:133065112"
ORIGIN      
        1 mpaavarllp rlrpsrtspl flllllallr gpasgrvphs vprtslpise adsyltrfai
       61 pqtynysvll vdpashmlyv gardtifavs lpfseerprr idwmvpeahr qncrkkgkke
      121 dechnfvqil aianashllt cgtfafdpkc gvidvssfqq verlesgrgk cpfepaqrsa
      181 avmaggvlya atvknylgte piisravgra edwirtetlp swlnapafva amalrpadwg
      241 dedgddeiyf ffteiarafd syervkvprv arvcagdlgg rktlqqrwtt flkadllcpg
      301 pelgrassvl qdvailrpeh gagtpvfygv fssqwegaai savcsfrpqd irtvlngpfr
      361 elkhdcnrgl pvmdndvpqp rpgecitnnm klqqfgsslf lpdrvltfir dhplmdkpvf
      421 padgrpllvt tdtayvrvva hrvpslsgke ydvlylgted ghlhravrig aqlsvledla
      481 lfpepqpven mklyqtwllv gsrtevtqvn ttncgrlqsc secilardpa cawsvrlaac
      541 vahpgergrl vqdiesadvs slcpeepgeh pvvfevpvaa aahvvlpcsp ssawascvwh
      601 qpsgvtaltr pqeglevvis peamgaya
//
LOCUS       XP_061011810             163 aa            linear   MAM 02-DEC-2023
DEFINITION  S-phase kinase-associated protein 1-like [Dama dama].
ACCESSION   XP_061011810
VERSION     XP_061011810.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155827.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..163
                     /product="S-phase kinase-associated protein 1-like"
                     /calculated_mol_wt=18629
     Region          4..127
                     /region_name="BTB_POZ_SKP1"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ
                     (poxvirus and zinc finger) domain found in S-phase
                     kinase-associated protein 1 (SKP1) and similar proteins;
                     cd18322"
                     /db_xref="CDD:349631"
     Site            order(25..26,30,34,38,43..44,46,48..49,105,108..109,111)
                     /site_type="other"
                     /note="cullin binding site [polypeptide binding]"
                     /db_xref="CDD:349631"
     Site            order(97,101,105,108,113,117,120..121,123..124,127)
                     /site_type="other"
                     /note="F-box protein binding site [polypeptide binding]"
                     /db_xref="CDD:349631"
     Region          113..160
                     /region_name="Skp1"
                     /note="Skp1 family, dimerization domain; pfam01466"
                     /db_xref="CDD:460222"
     CDS             1..163
                     /gene="LOC133065114"
                     /coded_by="XM_061155827.1:117..608"
                     /db_xref="GeneID:133065114"
ORIGIN      
        1 mpsiklqssd geifevdvei akqsvtiktm ledlgmddeg dddpvplpnv naailkkviq
       61 wfthhkddpp ppeddenkek rtddipvwdq eflkvdqgtl felilaanyl dikdlldvtc
      121 ktvanmikgk tpeeirktfn ikndfteeee aqvrkenqwc eek
//
LOCUS       XP_061011811             917 aa            linear   MAM 02-DEC-2023
DEFINITION  hexokinase-2 [Dama dama].
ACCESSION   XP_061011811
VERSION     XP_061011811.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155828.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..917
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..917
                     /product="hexokinase-2"
                     /calculated_mol_wt=102324
     Region          30..458
                     /region_name="ASKHA_NBD_HK2_meta_rpt1"
                     /note="nucleotide-binding domain (NBD) of the first repeat
                     of type II hexokinase from metazoan hexokinase (HK) domain
                     family; cd24125"
                     /db_xref="CDD:466975"
     Region          478..912
                     /region_name="ASKHA_NBD_HK2_meta_rpt2"
                     /note="nucleotide-binding domain (NBD) of the second
                     repeat of type II hexokinase from metazoan hexokinase (HK)
                     domain family; cd24128"
                     /db_xref="CDD:466978"
     CDS             1..917
                     /gene="HK2"
                     /coded_by="XM_061155828.1:459..3212"
                     /db_xref="GeneID:133065115"
ORIGIN      
        1 miashllayf ftelnhdqvq kvdqylyhmr lsdetlleva krfrkemekg lgatthptas
       61 vkmlptfvrs tpdgtehgef laldlggtnf rvlwvrvtdn glqrvemenq iyaipedimr
      121 gsgtqlfdhi aeclanfmdk lqikdkklpl gftfsfpcvq tkldesflvs wtkgfkssgv
      181 egkdvvtlir kaiqrrgdfd idivavvndt vgtmmtcgyd dqnceigliv gtgsnacyme
      241 emrhidtveg degrmcinme wgafgddgal ddirtefdqe idmgslnpgk qlfekmisgm
      301 ymgelvrlil vkmakeellf ggklspella tghfetkdvs diegekdgir kareilvrlg
      361 ldpthedcva thrvcqivst rsaslcaatl aavlrriken kgvdrlrstv gvdgsvykkh
      421 phfakrlhkt vrrlvpdcdv rflrsedgsg kgaamvtava yrladqhrar qktleslkls
      481 reqllevkrr mkiemergls kethaiapvk mlptyvcatp dgtekgdfla ldlggtnfrv
      541 llvrvrngkr rgvemhnkiy sipqevmhgt gdelfdhivq ciadfleymg mkgvslplgf
      601 tfsfpcqqns ldesillkwt kgfkasgceg edvvmllkea ihrreefdld vvavvndtvg
      661 tmmtcgyedp hcevglivgt gsnacymeem rnvelvegee grmcvnmewg afgdngcldd
      721 frtefdaavd elslnpgrqr fekmisgmyl geivrnilid ftkrgllfrg riserlktrg
      781 ifetkflsqi esdclallqv railhhlgle stcddsiivk evctvvarra aqlcgagmaa
      841 vvdkirenrg ldtlrvtvgv dgtlyklhph fakvmhetvk dlapkcdvsf lesedgsgkg
      901 aalitavacr ireagqr
//
LOCUS       XP_061011812             116 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA polymerase epsilon subunit 4 [Dama dama].
ACCESSION   XP_061011812
VERSION     XP_061011812.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155829.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..116
                     /product="DNA polymerase epsilon subunit 4"
                     /calculated_mol_wt=11978
     Region          37..115
                     /region_name="HFD_POLE4-like"
                     /note="histone-fold domain found in DNA polymerase epsilon
                     subunit 4 (POLE4) and similar proteins; cd22929"
                     /db_xref="CDD:467054"
     Site            order(37,44,48,51..52,54..59,61..62,64..66,68..79,91..95,
                     107,110..111,114)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:467054"
     Site            order(51,53,61,72,75..76,79,83,86..87,104..107,109..110,
                     113..114)
                     /site_type="other"
                     /note="catalytic subunit binding site [polypeptide
                     binding]"
                     /db_xref="CDD:467054"
     CDS             1..116
                     /gene="POLE4"
                     /coded_by="XM_061155829.1:51..401"
                     /db_xref="GeneID:133065116"
ORIGIN      
        1 maavapgsga sreeegtggd aatpqppapt sapgarlsrl plarvkalvk adpdvtlagq
       61 eaifilaraa elfvetiakd ayccaqqgkr ktlqrrdldn aieavdefaf legtld
//
LOCUS       XP_061011813             859 aa            linear   MAM 02-DEC-2023
DEFINITION  transforming growth factor-beta receptor-associated protein 1
            isoform X1 [Dama dama].
ACCESSION   XP_061011813
VERSION     XP_061011813.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155830.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..859
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..859
                     /product="transforming growth factor-beta
                     receptor-associated protein 1 isoform X1"
                     /calculated_mol_wt=96763
     Region          34..283
                     /region_name="CNH"
                     /note="CNH domain; cl02434"
                     /db_xref="CDD:470577"
     Region          448..550
                     /region_name="Vps39_1"
                     /note="Vacuolar sorting protein 39 domain 1; pfam10366"
                     /db_xref="CDD:371008"
     Region          584..698
                     /region_name="Clathrin"
                     /note="Region in Clathrin and VPS; pfam00637"
                     /db_xref="CDD:459884"
     Region          737..844
                     /region_name="Vps39_2"
                     /note="Vacuolar sorting protein 39 domain 2; pfam10367"
                     /db_xref="CDD:402126"
     CDS             1..859
                     /gene="TGFBRAP1"
                     /coded_by="XM_061155830.1:73..2652"
                     /db_xref="GeneID:133065117"
ORIGIN      
        1 mmstkaftlv paiereqllg drdrgslecv eccgrnlyvg tsdcfvyhfl leekplpggs
       61 atftatrqlh rhlgfkkavs elraasalsr llvlcdgcis lvhmlslepv psgarikgam
      121 afalnenpvs gdpfcvevci isvkrrtiqv flvyedrvqi vkevstpeqp lavavdgqfl
      181 clalttqyii lnystgtsqd lfpfcseerr pivkrigrqe fllagpgglg mfatvagisq
      241 rapvrwsenv igaavcfpyv valddefitv hsmldqqqkq tlpfkeghil qdfegrviva
      301 tskgvyilvp lplekqiqdl lasrrveeal vlakgarrni pkekfqvmyr rillqagfiq
      361 faqlqfleak elfrsgqldv relislypll lptsssftrs hpplhefadl nqltqgdqdk
      421 vakckrflms ylnevrstev angykedidt allklyaead hdslldllvt enfcllpdsa
      481 awlekhkkyf algllyhynh qdaaavqlwv sivngdvqds trsdlyeyiv dfltysvdpd
      541 lvwrhadwvl qrsqevgvqv ftkrpldeqq sgfnpddiis clkkypqalv kylehlvtdr
      601 rlqkeeyhth lavlyldevl qqrpgtpdkg aevtetqakl rrllqesdly rvhflmdrtr
      661 gaglplesai lhgkleqhee alrilvhela dfpaaedycl wrsegrdppy rqrlfhllla
      721 vylgpgpaap eravaavdll nrhtvefdva qvlqllpgtw svqllrpflm gavrdsihar
      781 rttqvavgla rsenliykyd kmklkgssvr lsdkklcqmc hnpflepvfv rypngglvht
      841 hcaagrhtep sspsagart
//
LOCUS       XP_061011814             801 aa            linear   MAM 02-DEC-2023
DEFINITION  transforming growth factor-beta receptor-associated protein 1
            isoform X2 [Dama dama].
ACCESSION   XP_061011814
VERSION     XP_061011814.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155831.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..801
                     /product="transforming growth factor-beta
                     receptor-associated protein 1 isoform X2"
                     /calculated_mol_wt=88238
     Region          34..283
                     /region_name="CNH"
                     /note="CNH domain; cl02434"
                     /db_xref="CDD:470577"
     Region          448..550
                     /region_name="Vps39_1"
                     /note="Vacuolar sorting protein 39 domain 1; pfam10366"
                     /db_xref="CDD:371008"
     CDS             1..801
                     /gene="TGFBRAP1"
                     /coded_by="XM_061155831.1:14..2419"
                     /db_xref="GeneID:133065117"
ORIGIN      
        1 mmstkaftlv paiereqllg drdrgslecv eccgrnlyvg tsdcfvyhfl leekplpggs
       61 atftatrqlh rhlgfkkavs elraasalsr llvlcdgcis lvhmlslepv psgarikgam
      121 afalnenpvs gdpfcvevci isvkrrtiqv flvyedrvqi vkevstpeqp lavavdgqfl
      181 clalttqyii lnystgtsqd lfpfcseerr pivkrigrqe fllagpgglg mfatvagisq
      241 rapvrwsenv igaavcfpyv valddefitv hsmldqqqkq tlpfkeghil qdfegrviva
      301 tskgvyilvp lplekqiqdl lasrrveeal vlakgarrni pkekfqvmyr rillqagfiq
      361 faqlqfleak elfrsgqldv relislypll lptsssftrs hpplhefadl nqltqgdqdk
      421 vakckrflms ylnevrstev angykedidt allklyaead hdslldllvt enfcllpdsa
      481 awlekhkkyf algllyhynh qdaaavqlwv sivngdvqds trsdlyeyiv dfltysvdpd
      541 lvwrhadwvl qrsqevgvqv ftkrpldeqq sgfnpddiis clkkypqalv kylehlvtdr
      601 rlqkeeyhth lavlyldevl qqrpgtpdkg aevtetqakl rrllqesdly rvhflmvphr
      661 qvpprrqdpg rraapgechp areagaargg sahpgpragg lpggrgllpv alggpgpalp
      721 paavppaagc lpgprpcrar agrgcrglae pphrgvrrgp gaaaaaghvv saaaaplpdg
      781 cragqhpcpe dhaggrgpgq v
//
LOCUS       XP_061011815             279 aa            linear   MAM 02-DEC-2023
DEFINITION  four and a half LIM domains protein 2 [Dama dama].
ACCESSION   XP_061011815
VERSION     XP_061011815.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155832.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..279
                     /product="four and a half LIM domains protein 2"
                     /calculated_mol_wt=31954
     Region          <5..33
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Region          36..97
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Site            order(40,43,62,65,68,71,89,92)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:259829"
     Region          101..157
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Site            order(101,104,123,126,129,132,150,153)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:259829"
     Region          162..218
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Site            order(162,165,182,185,188,191,209,212)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:259829"
     Region          221..278
                     /region_name="LIM4_FHL2"
                     /note="The fourth LIM domain of Four and a half LIM
                     domains protein 2 (FHL2); cd09433"
                     /db_xref="CDD:188817"
     Site            order(221,224,245,248,251,254,272,275)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188817"
     CDS             1..279
                     /gene="FHL2"
                     /coded_by="XM_061155832.1:260..1099"
                     /db_xref="GeneID:133065119"
ORIGIN      
        1 mterfdchhc edslfgrkyv lreeqpycva cfealfastc eecgkligcd ckdlsykdrh
       61 wheacfhcsr crgslvdkpf aakedqllca ecysqeyssr cqeckksimp gtrkmeykgs
      121 swhetcfich rcqqpigtks fipkdsenfc vpcyerqyal qcvqckkpit tggvtyreqp
      181 whrecfvcta ckkplsgqrf tsrdefaycl gcfcdlyakk cagcanpisg lggtkyisfe
      241 erqwhndcfn ckkcslslvg rgflterddi lcpdcgkdi
//
LOCUS       XP_061011816             279 aa            linear   MAM 02-DEC-2023
DEFINITION  four and a half LIM domains protein 2 [Dama dama].
ACCESSION   XP_061011816
VERSION     XP_061011816.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155833.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..279
                     /product="four and a half LIM domains protein 2"
                     /calculated_mol_wt=31954
     Region          <5..33
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Region          36..97
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Site            order(40,43,62,65,68,71,89,92)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:259829"
     Region          101..157
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Site            order(101,104,123,126,129,132,150,153)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:259829"
     Region          162..218
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Site            order(162,165,182,185,188,191,209,212)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:259829"
     Region          221..278
                     /region_name="LIM4_FHL2"
                     /note="The fourth LIM domain of Four and a half LIM
                     domains protein 2 (FHL2); cd09433"
                     /db_xref="CDD:188817"
     Site            order(221,224,245,248,251,254,272,275)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188817"
     CDS             1..279
                     /gene="FHL2"
                     /coded_by="XM_061155833.1:120..959"
                     /db_xref="GeneID:133065119"
ORIGIN      
        1 mterfdchhc edslfgrkyv lreeqpycva cfealfastc eecgkligcd ckdlsykdrh
       61 wheacfhcsr crgslvdkpf aakedqllca ecysqeyssr cqeckksimp gtrkmeykgs
      121 swhetcfich rcqqpigtks fipkdsenfc vpcyerqyal qcvqckkpit tggvtyreqp
      181 whrecfvcta ckkplsgqrf tsrdefaycl gcfcdlyakk cagcanpisg lggtkyisfe
      241 erqwhndcfn ckkcslslvg rgflterddi lcpdcgkdi
//
LOCUS       XP_061011817             279 aa            linear   MAM 02-DEC-2023
DEFINITION  four and a half LIM domains protein 2 [Dama dama].
ACCESSION   XP_061011817
VERSION     XP_061011817.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155834.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..279
                     /product="four and a half LIM domains protein 2"
                     /calculated_mol_wt=31954
     Region          <5..33
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Region          36..97
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Site            order(40,43,62,65,68,71,89,92)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:259829"
     Region          101..157
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Site            order(101,104,123,126,129,132,150,153)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:259829"
     Region          162..218
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Site            order(162,165,182,185,188,191,209,212)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:259829"
     Region          221..278
                     /region_name="LIM4_FHL2"
                     /note="The fourth LIM domain of Four and a half LIM
                     domains protein 2 (FHL2); cd09433"
                     /db_xref="CDD:188817"
     Site            order(221,224,245,248,251,254,272,275)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188817"
     CDS             1..279
                     /gene="FHL2"
                     /coded_by="XM_061155834.1:330..1169"
                     /db_xref="GeneID:133065119"
ORIGIN      
        1 mterfdchhc edslfgrkyv lreeqpycva cfealfastc eecgkligcd ckdlsykdrh
       61 wheacfhcsr crgslvdkpf aakedqllca ecysqeyssr cqeckksimp gtrkmeykgs
      121 swhetcfich rcqqpigtks fipkdsenfc vpcyerqyal qcvqckkpit tggvtyreqp
      181 whrecfvcta ckkplsgqrf tsrdefaycl gcfcdlyakk cagcanpisg lggtkyisfe
      241 erqwhndcfn ckkcslslvg rgflterddi lcpdcgkdi
//
LOCUS       XP_061011818             279 aa            linear   MAM 02-DEC-2023
DEFINITION  four and a half LIM domains protein 2 [Dama dama].
ACCESSION   XP_061011818
VERSION     XP_061011818.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155835.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..279
                     /product="four and a half LIM domains protein 2"
                     /calculated_mol_wt=31954
     Region          <5..33
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Region          36..97
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Site            order(40,43,62,65,68,71,89,92)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:259829"
     Region          101..157
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Site            order(101,104,123,126,129,132,150,153)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:259829"
     Region          162..218
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Site            order(162,165,182,185,188,191,209,212)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:259829"
     Region          221..278
                     /region_name="LIM4_FHL2"
                     /note="The fourth LIM domain of Four and a half LIM
                     domains protein 2 (FHL2); cd09433"
                     /db_xref="CDD:188817"
     Site            order(221,224,245,248,251,254,272,275)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188817"
     CDS             1..279
                     /gene="FHL2"
                     /coded_by="XM_061155835.1:225..1064"
                     /db_xref="GeneID:133065119"
ORIGIN      
        1 mterfdchhc edslfgrkyv lreeqpycva cfealfastc eecgkligcd ckdlsykdrh
       61 wheacfhcsr crgslvdkpf aakedqllca ecysqeyssr cqeckksimp gtrkmeykgs
      121 swhetcfich rcqqpigtks fipkdsenfc vpcyerqyal qcvqckkpit tggvtyreqp
      181 whrecfvcta ckkplsgqrf tsrdefaycl gcfcdlyakk cagcanpisg lggtkyisfe
      241 erqwhndcfn ckkcslslvg rgflterddi lcpdcgkdi
//
LOCUS       XP_061011819             279 aa            linear   MAM 02-DEC-2023
DEFINITION  four and a half LIM domains protein 2 [Dama dama].
ACCESSION   XP_061011819
VERSION     XP_061011819.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155836.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..279
                     /product="four and a half LIM domains protein 2"
                     /calculated_mol_wt=31954
     Region          <5..33
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Region          36..97
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Site            order(40,43,62,65,68,71,89,92)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:259829"
     Region          101..157
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Site            order(101,104,123,126,129,132,150,153)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:259829"
     Region          162..218
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Site            order(162,165,182,185,188,191,209,212)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:259829"
     Region          221..278
                     /region_name="LIM4_FHL2"
                     /note="The fourth LIM domain of Four and a half LIM
                     domains protein 2 (FHL2); cd09433"
                     /db_xref="CDD:188817"
     Site            order(221,224,245,248,251,254,272,275)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188817"
     CDS             1..279
                     /gene="FHL2"
                     /coded_by="XM_061155836.1:98..937"
                     /db_xref="GeneID:133065119"
ORIGIN      
        1 mterfdchhc edslfgrkyv lreeqpycva cfealfastc eecgkligcd ckdlsykdrh
       61 wheacfhcsr crgslvdkpf aakedqllca ecysqeyssr cqeckksimp gtrkmeykgs
      121 swhetcfich rcqqpigtks fipkdsenfc vpcyerqyal qcvqckkpit tggvtyreqp
      181 whrecfvcta ckkplsgqrf tsrdefaycl gcfcdlyakk cagcanpisg lggtkyisfe
      241 erqwhndcfn ckkcslslvg rgflterddi lcpdcgkdi
//
LOCUS       XP_061011820             279 aa            linear   MAM 02-DEC-2023
DEFINITION  four and a half LIM domains protein 2 [Dama dama].
ACCESSION   XP_061011820
VERSION     XP_061011820.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155837.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..279
                     /product="four and a half LIM domains protein 2"
                     /calculated_mol_wt=31954
     Region          <5..33
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Region          36..97
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Site            order(40,43,62,65,68,71,89,92)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:259829"
     Region          101..157
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Site            order(101,104,123,126,129,132,150,153)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:259829"
     Region          162..218
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Site            order(162,165,182,185,188,191,209,212)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:259829"
     Region          221..278
                     /region_name="LIM4_FHL2"
                     /note="The fourth LIM domain of Four and a half LIM
                     domains protein 2 (FHL2); cd09433"
                     /db_xref="CDD:188817"
     Site            order(221,224,245,248,251,254,272,275)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188817"
     CDS             1..279
                     /gene="FHL2"
                     /coded_by="XM_061155837.1:156..995"
                     /db_xref="GeneID:133065119"
ORIGIN      
        1 mterfdchhc edslfgrkyv lreeqpycva cfealfastc eecgkligcd ckdlsykdrh
       61 wheacfhcsr crgslvdkpf aakedqllca ecysqeyssr cqeckksimp gtrkmeykgs
      121 swhetcfich rcqqpigtks fipkdsenfc vpcyerqyal qcvqckkpit tggvtyreqp
      181 whrecfvcta ckkplsgqrf tsrdefaycl gcfcdlyakk cagcanpisg lggtkyisfe
      241 erqwhndcfn ckkcslslvg rgflterddi lcpdcgkdi
//
LOCUS       XP_061011821             232 aa            linear   MAM 02-DEC-2023
DEFINITION  ashwin [Dama dama].
ACCESSION   XP_061011821
VERSION     XP_061011821.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155838.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..232
                     /product="ashwin"
                     /calculated_mol_wt=25705
     Region          13..232
                     /region_name="Ashwin"
                     /note="Developmental protein; pfam15323"
                     /db_xref="CDD:464646"
     CDS             1..232
                     /gene="C11H2orf49"
                     /coded_by="XM_061155838.1:34..732"
                     /db_xref="GeneID:133065120"
ORIGIN      
        1 magdvggrsc tdselllhpe llsqeflllt leqknitven dmrvnkdslt dlyvqhaipl
       61 pqrdlprnrw gkmmekkreq heiknetkrs spadglrkrp livfdgssts tsikvkkten
      121 gdndrlrppp qasatsnafr klsdssssvs plvlssnlpv nnkvahsnsd trqdhdfrhr
      181 rsppgpaksp ppspvgatpv klkraapkee aeatinlkpp eakrkiqhvt wp
//
LOCUS       XP_061011822             396 aa            linear   MAM 02-DEC-2023
DEFINITION  small ribosomal subunit protein uS9m [Dama dama].
ACCESSION   XP_061011822
VERSION     XP_061011822.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155839.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..396
                     /product="small ribosomal subunit protein uS9m"
                     /calculated_mol_wt=45118
     Region          274..396
                     /region_name="Ribosomal_S9"
                     /note="Ribosomal protein S9/S16; pfam00380"
                     /db_xref="CDD:459791"
     CDS             1..396
                     /gene="MRPS9"
                     /coded_by="XM_061155839.1:50..1240"
                     /db_xref="GeneID:133065124"
ORIGIN      
        1 maapcmscga aasyrlflag rlsfareqgf wkaaasglqt gtrcqilrlk hspgvttkks
       61 vaalrresyt vdfikkqiee fnigkrhlan mmgedpetft qedvdraity lfpsglfekr
      121 arpimkhpee ifpkqraiqw gddgrpfhfl fytgkqsyys lmheaygkvl hveerqdqlr
      181 akglfsekpk tkdpigsrwl ikeeleemlv eklsdqdytq firllerlsa lpcdaaeeef
      241 vgrfrrtvti qskkhliepl qydeqgmafs tgqgkrktan aeavvyghgs gkieingvdy
      301 llyfpvtqdr eqlmfpfhfl dllgkhdvtc tvsgggrssq agairlavar alcsfvtedk
      361 vewmrqagll ttdprvrerk kpgqegarrk ftwkkr
//
LOCUS       XP_061011823             262 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: serine/arginine-rich splicing factor 10-like
            [Dama dama].
ACCESSION   XP_061011823
VERSION     XP_061011823.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155840.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..262
                     /product="LOW QUALITY PROTEIN: serine/arginine-rich
                     splicing factor 10-like"
                     /calculated_mol_wt=31043
     Region          5..99
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..262
                     /gene="LOC133065125"
                     /coded_by="XM_061155840.1:113..901"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:133065125"
ORIGIN      
        1 msrylrppnt slfvrnaadd trsedlrref grygpivdvy vpldfytrrp rgfayvqfed
       61 vrdaedalhn ldrkwicgrq ieiqfaqgdr ktpnqmkare grnvysssry ddydryrrsr
      121 srsydrrrsr srsfdynyrr sysprnsrpt grprrsrshs dndrfkhrnr sfsrsksnsr
      181 srsksqpkke mkaksrsrsa shtktrgtsk tdskthyksg sryekesrek eaprsksqsr
      241 sqsrsrsksr srxwtspkss gh
//
LOCUS       XP_061011824             812 aa            linear   MAM 02-DEC-2023
DEFINITION  sodium/hydrogen exchanger 2 [Dama dama].
ACCESSION   XP_061011824
VERSION     XP_061011824.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155841.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..812
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..812
                     /product="sodium/hydrogen exchanger 2"
                     /calculated_mol_wt=91102
     Region          74..630
                     /region_name="b_cpa1"
                     /note="sodium/hydrogen exchanger 3; TIGR00840"
                     /db_xref="CDD:273294"
     CDS             1..812
                     /gene="SLC9A2"
                     /coded_by="XM_061155841.1:16..2454"
                     /db_xref="GeneID:133065126"
ORIGIN      
        1 mepagpglsg qapllmllll lllqaagpag araetlldap rargtssspp spasvvapgt
       61 tpfeesrlpv ftldyphvqi pfeitlwill aslakigfhl yhklptivpe scllimvgll
      121 lggiifgvde ksppamktdv fflyllppiv ldagyfmptr pffenigtif wyavvgtlwn
      181 sigigvslfg icqieafgls ditllqnllf gslisavdpv avlavfenih vneqlyilvf
      241 gesllndavt vvlynlfksf cqmktietvd vfagianffv vgiggvligi flgfiaaftt
      301 rfthnirvie plfvflysyl syitaemfhl sgimaitaca mtmnkyveen vsqksyttik
      361 yfmkmlssvs etlififmgv stvgknhewn wafvcftlaf cliwralgvf vltqvinwfr
      421 tipltfkdqf iiaygglrga icfalvfllp ssvfprkklf itaaivviff tvfilgitir
      481 plvefldvkr snkkqqavse eihcrffdhv ktgiedvcgh wghnfwrdkf kkfddkylrk
      541 llirenqpks sivslykkle ikhaiemaet gmistvpsfa slndcreekv rkltpgemde
      601 ireilsrnly qirqrtlsyn rhnltadtse rqakeilirr rhslresvrk dsslnrehra
      661 ststsrylsl pkntklpekl qkkknfsnag gnssdsdlea gttvlnlqpr arrflpeqfs
      721 kkapqaykme wknevdvdsr qdqphsspaa hskegcpqtp gvlcqpllsk ghfgsvrgdr
      781 vhegirpqpp prlvrrasep gnrkgrfgse kp
//
LOCUS       XP_061011825             478 aa            linear   MAM 02-DEC-2023
DEFINITION  major facilitator superfamily domain-containing protein 9 [Dama
            dama].
ACCESSION   XP_061011825
VERSION     XP_061011825.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155842.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..478
                     /product="major facilitator superfamily domain-containing
                     protein 9"
                     /calculated_mol_wt=50066
     Region          52..465
                     /region_name="MFS_MFSD9"
                     /note="Major facilitator superfamily domain-containing
                     protein 9; cd17390"
                     /db_xref="CDD:340948"
     Site            order(59..60,63..64,67,99,149..150,152..154,157,176,
                     179..180,183,296,299..300,303..305,308,336,340,391..392,
                     396,400,416,419..420,423..424,427)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340948"
     CDS             1..478
                     /gene="MFSD9"
                     /coded_by="XM_061155842.1:33..1469"
                     /db_xref="GeneID:133065127"
ORIGIN      
        1 mrmepgeqss gmapdrglis atprpreepg tgtqegapgp gavrarrfll clylvgfldl
       61 fgvsmvvpll svhvkslgas ptvagivgss ygilqlfsst lvgcwsdvvg rrssllvcil
      121 csalgylmla astnvflftl arvpagifkh tlsisralla dlvteeerpv vlgqfntass
      181 mgfilgpvvg gylaeldggf yltafvcssv fvlnaglvwl fpwsevklss peddlprgrn
      241 qalwgktdsa tqraasaqgt pvskgparlp waevlatlrg lrslvlsalw vvfvvrllma
      301 vavmlyysnf vlaleerfgm gpraagylts cssalgvlag falgpllrly ghqsyrlllh
      361 ssvltstlll lfasargldv avacsvllsf staigrtcit dlqltmggvr aggsllgmgq
      421 svtavgrvla pilsgvaqev spcgppglga algfvavvim srnrphsrgq egdelkse
//
LOCUS       XP_061011826             616 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-18 receptor accessory protein [Dama dama].
ACCESSION   XP_061011826
VERSION     XP_061011826.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155843.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..616
                     /product="interleukin-18 receptor accessory protein"
                     /calculated_mol_wt=69833
     Region          57..185
                     /region_name="Ig_6"
                     /note="Immunoglobulin domain; pfam18452"
                     /db_xref="CDD:465773"
     Region          183..262
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          191..195
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          208..212
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          238..243
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          255..258
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          282..374
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          289..293
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          339..343
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          354..359
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          366..369
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          452..579
                     /region_name="TIR"
                     /note="TIR domain; pfam01582"
                     /db_xref="CDD:396246"
     CDS             1..616
                     /gene="IL18RAP"
                     /coded_by="XM_061155843.1:389..2239"
                     /db_xref="GeneID:133065128"
ORIGIN      
        1 msstlttepm scsddrdpgr mmlylgwifl wliaggsikg lnipgcftek plrtysarcg
       61 eefvlfcdlp epqkshfyhg srlsptrgse hlpcsgnknl sdvqwylqpq ngdpaveitq
      121 naphviqeks slhflttgih haglymcrpr mrspqenacc vwmilevkpq tnmscessvs
      181 heqhlllgsm ssiycpglsh qsdaqspevt wyqngkllpe nrrnpievde vydyhqgmyv
      241 cdytqtdnss swtvraviqv ktivkntnlk pdildpikdt levelgkplt lnctarfgfe
      301 infnpvlkwy mrdsdqewei ktpkgrsvks tlkdevierv vflekvtqsd lhrkficfaq
      361 nsignttqsi qlkkktgavf lyvllgtvma laglltagal lymywieivl lyrtyqskde
      421 tlgdqkefda fvsyakwspf eseassslse enlalnllpd vlenkygytl cllerdvtpg
      481 gvytedivsi ikksrrgifi lspnyvsgps ifelqaavnl aledqtlkli likfssfqep
      541 eslphlvrka lrvlptitwk glksvppnsr fwtqiryhmp vkssrgvtwn hlriipwifs
      601 lekteptgrs sqpggw
//
LOCUS       XP_061011827             538 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-18 receptor 1 [Dama dama].
ACCESSION   XP_061011827
VERSION     XP_061011827.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155844.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..538
                     /product="interleukin-18 receptor 1"
                     /calculated_mol_wt=61629
     Region          20..105
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          37..42
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          54..58
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          81..85
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          95..100
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          <155..205
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          165..169
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          179..184
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          196..199
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          222..312
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          230..234
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          243..247
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          292..297
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          371..520
                     /region_name="TIR"
                     /note="Toll - interleukin 1 - resistance; smart00255"
                     /db_xref="CDD:214587"
     CDS             1..538
                     /gene="IL18R1"
                     /coded_by="XM_061155844.1:478..2094"
                     /db_xref="GeneID:133065129"
ORIGIN      
        1 mhcreipltv wvlmfisase etctsrlhit avegepfylk ycssspehek ktttikwykn
       61 eshgpvdlnl sssprillrg yvlefwpvel tdsgsysfqm gndthgwkln viprskhscf
      121 tekvvtskav evkkslqiac ehnyyqqlvn rtvlyknctk mennqnpflk naefkdqgyy
      181 tcmfflhhng klfnvtktfn itivgdhsni ipallgpkin evkvklgkdi qlncsallne
      241 ndviywntwr kngedpnvhe gevtrirtse gkwlasiilr ienintrnln faynctaanq
      301 ggidtksfll lveedmvdip ghvftrgmiv avvisvvavc lvtvgviyrv dlvlfyrhfm
      361 grdetltdgk tydafvsylk ecqpehgeeh afavetlprv lekhfgyklc iferdvvpgg
      421 avvdeihsli eksrrliivl sksymssevr yelesglhea lverkikiil ieftpigdfr
      481 flpqslkllk shrvlkwkad kslsynsrfw knllylmpak avkpcrnese vlpvllks
//
LOCUS       XP_061011828             554 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-1 receptor-like 1 isoform X1 [Dama dama].
ACCESSION   XP_061011828
VERSION     XP_061011828.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155845.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..554
                     /product="interleukin-1 receptor-like 1 isoform X1"
                     /calculated_mol_wt=63341
     Region          23..316
                     /region_name="PHA02785"
                     /note="IL-beta-binding protein; Provisional"
                     /db_xref="CDD:165149"
     Region          119..204
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          129..133
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          144..148
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          164..168
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          178..183
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          195..198
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          378..533
                     /region_name="TIR"
                     /note="TIR domain; pfam01582"
                     /db_xref="CDD:396246"
     CDS             1..554
                     /gene="IL1RL1"
                     /coded_by="XM_061155845.1:493..2157"
                     /db_xref="GeneID:133065131"
ORIGIN      
        1 mrlwvsvilt alisstpakf srsflglene alivkcprqg kypysvdwyy sktnksittq
       61 rgnrivasgk clkflpakvn dsgfytcvvr cptsnktgyv nvtifekqsd cnvpdyliys
      121 ttfgsekksl ifcptidryn wtqpvewfkn cevlqgpryl ahktfllihn atnkdtgdyt
      181 ckfmhneygv kyivtatrsf tvteeqgfsl ppeikapaqn eikeveigkp tnitclacfg
      241 kghqvmaeaf wrvngsevkn fsetriqvmq elmqsgeltc rravlkiedv reedltwkyd
      301 clamnfhgfi thtitlrrkn pmdqqstyym lagfslllll inglviilkv fwieiilfwr
      361 diarpsktrn dgkiydayvi yprscknspe gassveyfvh qilpdvlenk cgynlciygr
      421 dllpgqdvas tvetsirmsr rhlfiltaei lhskeftyer eialhsaliq qdskailiem
      481 ealcppgglq leelqdslkh likvqgtikw reddvanrrs lnskfwkhvr yhmppapsrl
      541 prktpslasl saqg
//
LOCUS       XP_061011829             554 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-1 receptor-like 1 isoform X1 [Dama dama].
ACCESSION   XP_061011829
VERSION     XP_061011829.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155846.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..554
                     /product="interleukin-1 receptor-like 1 isoform X1"
                     /calculated_mol_wt=63341
     Region          23..316
                     /region_name="PHA02785"
                     /note="IL-beta-binding protein; Provisional"
                     /db_xref="CDD:165149"
     Region          119..204
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          129..133
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          144..148
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          164..168
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          178..183
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          195..198
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          378..533
                     /region_name="TIR"
                     /note="TIR domain; pfam01582"
                     /db_xref="CDD:396246"
     CDS             1..554
                     /gene="IL1RL1"
                     /coded_by="XM_061155846.1:250..1914"
                     /db_xref="GeneID:133065131"
ORIGIN      
        1 mrlwvsvilt alisstpakf srsflglene alivkcprqg kypysvdwyy sktnksittq
       61 rgnrivasgk clkflpakvn dsgfytcvvr cptsnktgyv nvtifekqsd cnvpdyliys
      121 ttfgsekksl ifcptidryn wtqpvewfkn cevlqgpryl ahktfllihn atnkdtgdyt
      181 ckfmhneygv kyivtatrsf tvteeqgfsl ppeikapaqn eikeveigkp tnitclacfg
      241 kghqvmaeaf wrvngsevkn fsetriqvmq elmqsgeltc rravlkiedv reedltwkyd
      301 clamnfhgfi thtitlrrkn pmdqqstyym lagfslllll inglviilkv fwieiilfwr
      361 diarpsktrn dgkiydayvi yprscknspe gassveyfvh qilpdvlenk cgynlciygr
      421 dllpgqdvas tvetsirmsr rhlfiltaei lhskeftyer eialhsaliq qdskailiem
      481 ealcppgglq leelqdslkh likvqgtikw reddvanrrs lnskfwkhvr yhmppapsrl
      541 prktpslasl saqg
//
LOCUS       XP_061011830             554 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-1 receptor-like 1 isoform X1 [Dama dama].
ACCESSION   XP_061011830
VERSION     XP_061011830.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155847.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..554
                     /product="interleukin-1 receptor-like 1 isoform X1"
                     /calculated_mol_wt=63341
     Region          23..316
                     /region_name="PHA02785"
                     /note="IL-beta-binding protein; Provisional"
                     /db_xref="CDD:165149"
     Region          119..204
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          129..133
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          144..148
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          164..168
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          178..183
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          195..198
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          378..533
                     /region_name="TIR"
                     /note="TIR domain; pfam01582"
                     /db_xref="CDD:396246"
     CDS             1..554
                     /gene="IL1RL1"
                     /coded_by="XM_061155847.1:514..2178"
                     /db_xref="GeneID:133065131"
ORIGIN      
        1 mrlwvsvilt alisstpakf srsflglene alivkcprqg kypysvdwyy sktnksittq
       61 rgnrivasgk clkflpakvn dsgfytcvvr cptsnktgyv nvtifekqsd cnvpdyliys
      121 ttfgsekksl ifcptidryn wtqpvewfkn cevlqgpryl ahktfllihn atnkdtgdyt
      181 ckfmhneygv kyivtatrsf tvteeqgfsl ppeikapaqn eikeveigkp tnitclacfg
      241 kghqvmaeaf wrvngsevkn fsetriqvmq elmqsgeltc rravlkiedv reedltwkyd
      301 clamnfhgfi thtitlrrkn pmdqqstyym lagfslllll inglviilkv fwieiilfwr
      361 diarpsktrn dgkiydayvi yprscknspe gassveyfvh qilpdvlenk cgynlciygr
      421 dllpgqdvas tvetsirmsr rhlfiltaei lhskeftyer eialhsaliq qdskailiem
      481 ealcppgglq leelqdslkh likvqgtikw reddvanrrs lnskfwkhvr yhmppapsrl
      541 prktpslasl saqg
//
LOCUS       XP_061011831             554 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-1 receptor-like 1 isoform X1 [Dama dama].
ACCESSION   XP_061011831
VERSION     XP_061011831.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155848.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..554
                     /product="interleukin-1 receptor-like 1 isoform X1"
                     /calculated_mol_wt=63341
     Region          23..316
                     /region_name="PHA02785"
                     /note="IL-beta-binding protein; Provisional"
                     /db_xref="CDD:165149"
     Region          119..204
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          129..133
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          144..148
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          164..168
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          178..183
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          195..198
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          378..533
                     /region_name="TIR"
                     /note="TIR domain; pfam01582"
                     /db_xref="CDD:396246"
     CDS             1..554
                     /gene="IL1RL1"
                     /coded_by="XM_061155848.1:405..2069"
                     /db_xref="GeneID:133065131"
ORIGIN      
        1 mrlwvsvilt alisstpakf srsflglene alivkcprqg kypysvdwyy sktnksittq
       61 rgnrivasgk clkflpakvn dsgfytcvvr cptsnktgyv nvtifekqsd cnvpdyliys
      121 ttfgsekksl ifcptidryn wtqpvewfkn cevlqgpryl ahktfllihn atnkdtgdyt
      181 ckfmhneygv kyivtatrsf tvteeqgfsl ppeikapaqn eikeveigkp tnitclacfg
      241 kghqvmaeaf wrvngsevkn fsetriqvmq elmqsgeltc rravlkiedv reedltwkyd
      301 clamnfhgfi thtitlrrkn pmdqqstyym lagfslllll inglviilkv fwieiilfwr
      361 diarpsktrn dgkiydayvi yprscknspe gassveyfvh qilpdvlenk cgynlciygr
      421 dllpgqdvas tvetsirmsr rhlfiltaei lhskeftyer eialhsaliq qdskailiem
      481 ealcppgglq leelqdslkh likvqgtikw reddvanrrs lnskfwkhvr yhmppapsrl
      541 prktpslasl saqg
//
LOCUS       XP_061011832             554 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-1 receptor-like 1 isoform X1 [Dama dama].
ACCESSION   XP_061011832
VERSION     XP_061011832.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155849.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..554
                     /product="interleukin-1 receptor-like 1 isoform X1"
                     /calculated_mol_wt=63341
     Region          23..316
                     /region_name="PHA02785"
                     /note="IL-beta-binding protein; Provisional"
                     /db_xref="CDD:165149"
     Region          119..204
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          129..133
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          144..148
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          164..168
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          178..183
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          195..198
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          378..533
                     /region_name="TIR"
                     /note="TIR domain; pfam01582"
                     /db_xref="CDD:396246"
     CDS             1..554
                     /gene="IL1RL1"
                     /coded_by="XM_061155849.1:131..1795"
                     /db_xref="GeneID:133065131"
ORIGIN      
        1 mrlwvsvilt alisstpakf srsflglene alivkcprqg kypysvdwyy sktnksittq
       61 rgnrivasgk clkflpakvn dsgfytcvvr cptsnktgyv nvtifekqsd cnvpdyliys
      121 ttfgsekksl ifcptidryn wtqpvewfkn cevlqgpryl ahktfllihn atnkdtgdyt
      181 ckfmhneygv kyivtatrsf tvteeqgfsl ppeikapaqn eikeveigkp tnitclacfg
      241 kghqvmaeaf wrvngsevkn fsetriqvmq elmqsgeltc rravlkiedv reedltwkyd
      301 clamnfhgfi thtitlrrkn pmdqqstyym lagfslllll inglviilkv fwieiilfwr
      361 diarpsktrn dgkiydayvi yprscknspe gassveyfvh qilpdvlenk cgynlciygr
      421 dllpgqdvas tvetsirmsr rhlfiltaei lhskeftyer eialhsaliq qdskailiem
      481 ealcppgglq leelqdslkh likvqgtikw reddvanrrs lnskfwkhvr yhmppapsrl
      541 prktpslasl saqg
//
LOCUS       XP_061011833             554 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-1 receptor-like 1 isoform X1 [Dama dama].
ACCESSION   XP_061011833
VERSION     XP_061011833.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155850.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..554
                     /product="interleukin-1 receptor-like 1 isoform X1"
                     /calculated_mol_wt=63341
     Region          23..316
                     /region_name="PHA02785"
                     /note="IL-beta-binding protein; Provisional"
                     /db_xref="CDD:165149"
     Region          119..204
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          129..133
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          144..148
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          164..168
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          178..183
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          195..198
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          378..533
                     /region_name="TIR"
                     /note="TIR domain; pfam01582"
                     /db_xref="CDD:396246"
     CDS             1..554
                     /gene="IL1RL1"
                     /coded_by="XM_061155850.1:202..1866"
                     /db_xref="GeneID:133065131"
ORIGIN      
        1 mrlwvsvilt alisstpakf srsflglene alivkcprqg kypysvdwyy sktnksittq
       61 rgnrivasgk clkflpakvn dsgfytcvvr cptsnktgyv nvtifekqsd cnvpdyliys
      121 ttfgsekksl ifcptidryn wtqpvewfkn cevlqgpryl ahktfllihn atnkdtgdyt
      181 ckfmhneygv kyivtatrsf tvteeqgfsl ppeikapaqn eikeveigkp tnitclacfg
      241 kghqvmaeaf wrvngsevkn fsetriqvmq elmqsgeltc rravlkiedv reedltwkyd
      301 clamnfhgfi thtitlrrkn pmdqqstyym lagfslllll inglviilkv fwieiilfwr
      361 diarpsktrn dgkiydayvi yprscknspe gassveyfvh qilpdvlenk cgynlciygr
      421 dllpgqdvas tvetsirmsr rhlfiltaei lhskeftyer eialhsaliq qdskailiem
      481 ealcppgglq leelqdslkh likvqgtikw reddvanrrs lnskfwkhvr yhmppapsrl
      541 prktpslasl saqg
//
LOCUS       XP_061011834             554 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-1 receptor-like 1 isoform X1 [Dama dama].
ACCESSION   XP_061011834
VERSION     XP_061011834.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155851.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..554
                     /product="interleukin-1 receptor-like 1 isoform X1"
                     /calculated_mol_wt=63341
     Region          23..316
                     /region_name="PHA02785"
                     /note="IL-beta-binding protein; Provisional"
                     /db_xref="CDD:165149"
     Region          119..204
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          129..133
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          144..148
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          164..168
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          178..183
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          195..198
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          378..533
                     /region_name="TIR"
                     /note="TIR domain; pfam01582"
                     /db_xref="CDD:396246"
     CDS             1..554
                     /gene="IL1RL1"
                     /coded_by="XM_061155851.1:270..1934"
                     /db_xref="GeneID:133065131"
ORIGIN      
        1 mrlwvsvilt alisstpakf srsflglene alivkcprqg kypysvdwyy sktnksittq
       61 rgnrivasgk clkflpakvn dsgfytcvvr cptsnktgyv nvtifekqsd cnvpdyliys
      121 ttfgsekksl ifcptidryn wtqpvewfkn cevlqgpryl ahktfllihn atnkdtgdyt
      181 ckfmhneygv kyivtatrsf tvteeqgfsl ppeikapaqn eikeveigkp tnitclacfg
      241 kghqvmaeaf wrvngsevkn fsetriqvmq elmqsgeltc rravlkiedv reedltwkyd
      301 clamnfhgfi thtitlrrkn pmdqqstyym lagfslllll inglviilkv fwieiilfwr
      361 diarpsktrn dgkiydayvi yprscknspe gassveyfvh qilpdvlenk cgynlciygr
      421 dllpgqdvas tvetsirmsr rhlfiltaei lhskeftyer eialhsaliq qdskailiem
      481 ealcppgglq leelqdslkh likvqgtikw reddvanrrs lnskfwkhvr yhmppapsrl
      541 prktpslasl saqg
//
LOCUS       XP_061011835             554 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-1 receptor-like 1 isoform X1 [Dama dama].
ACCESSION   XP_061011835
VERSION     XP_061011835.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155852.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..554
                     /product="interleukin-1 receptor-like 1 isoform X1"
                     /calculated_mol_wt=63341
     Region          23..316
                     /region_name="PHA02785"
                     /note="IL-beta-binding protein; Provisional"
                     /db_xref="CDD:165149"
     Region          119..204
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          129..133
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          144..148
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          164..168
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          178..183
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          195..198
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          378..533
                     /region_name="TIR"
                     /note="TIR domain; pfam01582"
                     /db_xref="CDD:396246"
     CDS             1..554
                     /gene="IL1RL1"
                     /coded_by="XM_061155852.1:249..1913"
                     /db_xref="GeneID:133065131"
ORIGIN      
        1 mrlwvsvilt alisstpakf srsflglene alivkcprqg kypysvdwyy sktnksittq
       61 rgnrivasgk clkflpakvn dsgfytcvvr cptsnktgyv nvtifekqsd cnvpdyliys
      121 ttfgsekksl ifcptidryn wtqpvewfkn cevlqgpryl ahktfllihn atnkdtgdyt
      181 ckfmhneygv kyivtatrsf tvteeqgfsl ppeikapaqn eikeveigkp tnitclacfg
      241 kghqvmaeaf wrvngsevkn fsetriqvmq elmqsgeltc rravlkiedv reedltwkyd
      301 clamnfhgfi thtitlrrkn pmdqqstyym lagfslllll inglviilkv fwieiilfwr
      361 diarpsktrn dgkiydayvi yprscknspe gassveyfvh qilpdvlenk cgynlciygr
      421 dllpgqdvas tvetsirmsr rhlfiltaei lhskeftyer eialhsaliq qdskailiem
      481 ealcppgglq leelqdslkh likvqgtikw reddvanrrs lnskfwkhvr yhmppapsrl
      541 prktpslasl saqg
//
LOCUS       XP_061011836             554 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-1 receptor-like 1 isoform X1 [Dama dama].
ACCESSION   XP_061011836
VERSION     XP_061011836.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155853.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..554
                     /product="interleukin-1 receptor-like 1 isoform X1"
                     /calculated_mol_wt=63341
     Region          23..316
                     /region_name="PHA02785"
                     /note="IL-beta-binding protein; Provisional"
                     /db_xref="CDD:165149"
     Region          119..204
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          129..133
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          144..148
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          164..168
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          178..183
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          195..198
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          378..533
                     /region_name="TIR"
                     /note="TIR domain; pfam01582"
                     /db_xref="CDD:396246"
     CDS             1..554
                     /gene="IL1RL1"
                     /coded_by="XM_061155853.1:327..1991"
                     /db_xref="GeneID:133065131"
ORIGIN      
        1 mrlwvsvilt alisstpakf srsflglene alivkcprqg kypysvdwyy sktnksittq
       61 rgnrivasgk clkflpakvn dsgfytcvvr cptsnktgyv nvtifekqsd cnvpdyliys
      121 ttfgsekksl ifcptidryn wtqpvewfkn cevlqgpryl ahktfllihn atnkdtgdyt
      181 ckfmhneygv kyivtatrsf tvteeqgfsl ppeikapaqn eikeveigkp tnitclacfg
      241 kghqvmaeaf wrvngsevkn fsetriqvmq elmqsgeltc rravlkiedv reedltwkyd
      301 clamnfhgfi thtitlrrkn pmdqqstyym lagfslllll inglviilkv fwieiilfwr
      361 diarpsktrn dgkiydayvi yprscknspe gassveyfvh qilpdvlenk cgynlciygr
      421 dllpgqdvas tvetsirmsr rhlfiltaei lhskeftyer eialhsaliq qdskailiem
      481 ealcppgglq leelqdslkh likvqgtikw reddvanrrs lnskfwkhvr yhmppapsrl
      541 prktpslasl saqg
//
LOCUS       XP_061011837             554 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-1 receptor-like 1 isoform X1 [Dama dama].
ACCESSION   XP_061011837
VERSION     XP_061011837.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155854.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..554
                     /product="interleukin-1 receptor-like 1 isoform X1"
                     /calculated_mol_wt=63341
     Region          23..316
                     /region_name="PHA02785"
                     /note="IL-beta-binding protein; Provisional"
                     /db_xref="CDD:165149"
     Region          119..204
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          129..133
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          144..148
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          164..168
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          178..183
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          195..198
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          378..533
                     /region_name="TIR"
                     /note="TIR domain; pfam01582"
                     /db_xref="CDD:396246"
     CDS             1..554
                     /gene="IL1RL1"
                     /coded_by="XM_061155854.1:306..1970"
                     /db_xref="GeneID:133065131"
ORIGIN      
        1 mrlwvsvilt alisstpakf srsflglene alivkcprqg kypysvdwyy sktnksittq
       61 rgnrivasgk clkflpakvn dsgfytcvvr cptsnktgyv nvtifekqsd cnvpdyliys
      121 ttfgsekksl ifcptidryn wtqpvewfkn cevlqgpryl ahktfllihn atnkdtgdyt
      181 ckfmhneygv kyivtatrsf tvteeqgfsl ppeikapaqn eikeveigkp tnitclacfg
      241 kghqvmaeaf wrvngsevkn fsetriqvmq elmqsgeltc rravlkiedv reedltwkyd
      301 clamnfhgfi thtitlrrkn pmdqqstyym lagfslllll inglviilkv fwieiilfwr
      361 diarpsktrn dgkiydayvi yprscknspe gassveyfvh qilpdvlenk cgynlciygr
      421 dllpgqdvas tvetsirmsr rhlfiltaei lhskeftyer eialhsaliq qdskailiem
      481 ealcppgglq leelqdslkh likvqgtikw reddvanrrs lnskfwkhvr yhmppapsrl
      541 prktpslasl saqg
//
LOCUS       XP_061011838             554 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-1 receptor-like 1 isoform X1 [Dama dama].
ACCESSION   XP_061011838
VERSION     XP_061011838.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155855.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..554
                     /product="interleukin-1 receptor-like 1 isoform X1"
                     /calculated_mol_wt=63341
     Region          23..316
                     /region_name="PHA02785"
                     /note="IL-beta-binding protein; Provisional"
                     /db_xref="CDD:165149"
     Region          119..204
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          129..133
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          144..148
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          164..168
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          178..183
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          195..198
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          378..533
                     /region_name="TIR"
                     /note="TIR domain; pfam01582"
                     /db_xref="CDD:396246"
     CDS             1..554
                     /gene="IL1RL1"
                     /coded_by="XM_061155855.1:184..1848"
                     /db_xref="GeneID:133065131"
ORIGIN      
        1 mrlwvsvilt alisstpakf srsflglene alivkcprqg kypysvdwyy sktnksittq
       61 rgnrivasgk clkflpakvn dsgfytcvvr cptsnktgyv nvtifekqsd cnvpdyliys
      121 ttfgsekksl ifcptidryn wtqpvewfkn cevlqgpryl ahktfllihn atnkdtgdyt
      181 ckfmhneygv kyivtatrsf tvteeqgfsl ppeikapaqn eikeveigkp tnitclacfg
      241 kghqvmaeaf wrvngsevkn fsetriqvmq elmqsgeltc rravlkiedv reedltwkyd
      301 clamnfhgfi thtitlrrkn pmdqqstyym lagfslllll inglviilkv fwieiilfwr
      361 diarpsktrn dgkiydayvi yprscknspe gassveyfvh qilpdvlenk cgynlciygr
      421 dllpgqdvas tvetsirmsr rhlfiltaei lhskeftyer eialhsaliq qdskailiem
      481 ealcppgglq leelqdslkh likvqgtikw reddvanrrs lnskfwkhvr yhmppapsrl
      541 prktpslasl saqg
//
LOCUS       XP_061011839             554 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-1 receptor-like 1 isoform X1 [Dama dama].
ACCESSION   XP_061011839
VERSION     XP_061011839.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155856.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..554
                     /product="interleukin-1 receptor-like 1 isoform X1"
                     /calculated_mol_wt=63341
     Region          23..316
                     /region_name="PHA02785"
                     /note="IL-beta-binding protein; Provisional"
                     /db_xref="CDD:165149"
     Region          119..204
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          129..133
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          144..148
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          164..168
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          178..183
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          195..198
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          378..533
                     /region_name="TIR"
                     /note="TIR domain; pfam01582"
                     /db_xref="CDD:396246"
     CDS             1..554
                     /gene="IL1RL1"
                     /coded_by="XM_061155856.1:131..1795"
                     /db_xref="GeneID:133065131"
ORIGIN      
        1 mrlwvsvilt alisstpakf srsflglene alivkcprqg kypysvdwyy sktnksittq
       61 rgnrivasgk clkflpakvn dsgfytcvvr cptsnktgyv nvtifekqsd cnvpdyliys
      121 ttfgsekksl ifcptidryn wtqpvewfkn cevlqgpryl ahktfllihn atnkdtgdyt
      181 ckfmhneygv kyivtatrsf tvteeqgfsl ppeikapaqn eikeveigkp tnitclacfg
      241 kghqvmaeaf wrvngsevkn fsetriqvmq elmqsgeltc rravlkiedv reedltwkyd
      301 clamnfhgfi thtitlrrkn pmdqqstyym lagfslllll inglviilkv fwieiilfwr
      361 diarpsktrn dgkiydayvi yprscknspe gassveyfvh qilpdvlenk cgynlciygr
      421 dllpgqdvas tvetsirmsr rhlfiltaei lhskeftyer eialhsaliq qdskailiem
      481 ealcppgglq leelqdslkh likvqgtikw reddvanrrs lnskfwkhvr yhmppapsrl
      541 prktpslasl saqg
//
LOCUS       XP_061011840             554 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-1 receptor-like 1 isoform X1 [Dama dama].
ACCESSION   XP_061011840
VERSION     XP_061011840.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155857.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..554
                     /product="interleukin-1 receptor-like 1 isoform X1"
                     /calculated_mol_wt=63341
     Region          23..316
                     /region_name="PHA02785"
                     /note="IL-beta-binding protein; Provisional"
                     /db_xref="CDD:165149"
     Region          119..204
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          129..133
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          144..148
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          164..168
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          178..183
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          195..198
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          378..533
                     /region_name="TIR"
                     /note="TIR domain; pfam01582"
                     /db_xref="CDD:396246"
     CDS             1..554
                     /gene="IL1RL1"
                     /coded_by="XM_061155857.1:215..1879"
                     /db_xref="GeneID:133065131"
ORIGIN      
        1 mrlwvsvilt alisstpakf srsflglene alivkcprqg kypysvdwyy sktnksittq
       61 rgnrivasgk clkflpakvn dsgfytcvvr cptsnktgyv nvtifekqsd cnvpdyliys
      121 ttfgsekksl ifcptidryn wtqpvewfkn cevlqgpryl ahktfllihn atnkdtgdyt
      181 ckfmhneygv kyivtatrsf tvteeqgfsl ppeikapaqn eikeveigkp tnitclacfg
      241 kghqvmaeaf wrvngsevkn fsetriqvmq elmqsgeltc rravlkiedv reedltwkyd
      301 clamnfhgfi thtitlrrkn pmdqqstyym lagfslllll inglviilkv fwieiilfwr
      361 diarpsktrn dgkiydayvi yprscknspe gassveyfvh qilpdvlenk cgynlciygr
      421 dllpgqdvas tvetsirmsr rhlfiltaei lhskeftyer eialhsaliq qdskailiem
      481 ealcppgglq leelqdslkh likvqgtikw reddvanrrs lnskfwkhvr yhmppapsrl
      541 prktpslasl saqg
//
LOCUS       XP_061011841             530 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-1 receptor-like 1 isoform X2 [Dama dama].
ACCESSION   XP_061011841
VERSION     XP_061011841.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155858.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..530
                     /product="interleukin-1 receptor-like 1 isoform X2"
                     /calculated_mol_wt=60663
     Region          27..105
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          32..36
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          70..74
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          84..89
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          97..100
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          119..204
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          129..133
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          144..148
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          164..168
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          178..183
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          195..198
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          <260..293
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          260..263
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          274..279
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          287..290
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          354..509
                     /region_name="TIR"
                     /note="TIR domain; pfam01582"
                     /db_xref="CDD:396246"
     CDS             1..530
                     /gene="IL1RL1"
                     /coded_by="XM_061155858.1:493..2085"
                     /db_xref="GeneID:133065131"
ORIGIN      
        1 mrlwvsvilt alisstpakf srsflglene alivkcprqg kypysvdwyy sktnksittq
       61 rgnrivasgk clkflpakvn dsgfytcvvr cptsnktgyv nvtifekqsd cnvpdyliys
      121 ttfgsekksl ifcptidryn wtqpvewfkn cevlqgpryl ahktfllihn atnkdtgdyt
      181 ckfmhneygv kyivtatrsf tvtgkptnit clacfgkghq vmaeafwrvn gsevknfset
      241 riqvmqelmq sgeltcrrav lkiedvreed ltwkydclam nfhgfithti tlrrknpmdq
      301 qstyymlagf slllllingl viilkvfwie iilfwrdiar psktrndgki ydayviyprs
      361 cknspegass veyfvhqilp dvlenkcgyn lciygrdllp gqdvastvet sirmsrrhlf
      421 iltaeilhsk eftyereial hsaliqqdsk ailiemealc ppgglqleel qdslkhlikv
      481 qgtikwredd vanrrslnsk fwkhvryhmp papsrlprkt pslaslsaqg
//
LOCUS       XP_061011842             371 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-1 receptor-like 1 isoform X3 [Dama dama].
ACCESSION   XP_061011842
VERSION     XP_061011842.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155859.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..371
                     /product="interleukin-1 receptor-like 1 isoform X3"
                     /calculated_mol_wt=42408
     Region          <101..134
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          101..104
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          115..120
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          128..131
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          195..350
                     /region_name="TIR"
                     /note="TIR domain; pfam01582"
                     /db_xref="CDD:396246"
     CDS             1..371
                     /gene="IL1RL1"
                     /coded_by="XM_061155859.1:831..1946"
                     /db_xref="GeneID:133065131"
ORIGIN      
        1 mhneygvkyi vtatrsftvt eeqgfslppe ikapaqneik eveigkptni tclacfgkgh
       61 qvmaeafwrv ngsevknfse triqvmqelm qsgeltcrra vlkiedvree dltwkydcla
      121 mnfhgfitht itlrrknpmd qqstyymlag fsllllling lviilkvfwi eiilfwrdia
      181 rpsktrndgk iydayviypr scknspegas sveyfvhqil pdvlenkcgy nlciygrdll
      241 pgqdvastve tsirmsrrhl filtaeilhs keftyereia lhsaliqqds kailiemeal
      301 cppgglqlee lqdslkhlik vqgtikwred dvanrrslns kfwkhvryhm ppapsrlprk
      361 tpslaslsaq g
//
LOCUS       XP_061011843             371 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-1 receptor-like 1 isoform X3 [Dama dama].
ACCESSION   XP_061011843
VERSION     XP_061011843.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155860.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..371
                     /product="interleukin-1 receptor-like 1 isoform X3"
                     /calculated_mol_wt=42408
     Region          <101..134
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          101..104
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          115..120
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          128..131
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          195..350
                     /region_name="TIR"
                     /note="TIR domain; pfam01582"
                     /db_xref="CDD:396246"
     CDS             1..371
                     /gene="IL1RL1"
                     /coded_by="XM_061155860.1:500..1615"
                     /db_xref="GeneID:133065131"
ORIGIN      
        1 mhneygvkyi vtatrsftvt eeqgfslppe ikapaqneik eveigkptni tclacfgkgh
       61 qvmaeafwrv ngsevknfse triqvmqelm qsgeltcrra vlkiedvree dltwkydcla
      121 mnfhgfitht itlrrknpmd qqstyymlag fsllllling lviilkvfwi eiilfwrdia
      181 rpsktrndgk iydayviypr scknspegas sveyfvhqil pdvlenkcgy nlciygrdll
      241 pgqdvastve tsirmsrrhl filtaeilhs keftyereia lhsaliqqds kailiemeal
      301 cppgglqlee lqdslkhlik vqgtikwred dvanrrslns kfwkhvryhm ppapsrlprk
      361 tpslaslsaq g
//
LOCUS       XP_061011844             371 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-1 receptor-like 1 isoform X3 [Dama dama].
ACCESSION   XP_061011844
VERSION     XP_061011844.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155861.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..371
                     /product="interleukin-1 receptor-like 1 isoform X3"
                     /calculated_mol_wt=42408
     Region          <101..134
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          101..104
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          115..120
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          128..131
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          195..350
                     /region_name="TIR"
                     /note="TIR domain; pfam01582"
                     /db_xref="CDD:396246"
     CDS             1..371
                     /gene="IL1RL1"
                     /coded_by="XM_061155861.1:488..1603"
                     /db_xref="GeneID:133065131"
ORIGIN      
        1 mhneygvkyi vtatrsftvt eeqgfslppe ikapaqneik eveigkptni tclacfgkgh
       61 qvmaeafwrv ngsevknfse triqvmqelm qsgeltcrra vlkiedvree dltwkydcla
      121 mnfhgfitht itlrrknpmd qqstyymlag fsllllling lviilkvfwi eiilfwrdia
      181 rpsktrndgk iydayviypr scknspegas sveyfvhqil pdvlenkcgy nlciygrdll
      241 pgqdvastve tsirmsrrhl filtaeilhs keftyereia lhsaliqqds kailiemeal
      301 cppgglqlee lqdslkhlik vqgtikwred dvanrrslns kfwkhvryhm ppapsrlprk
      361 tpslaslsaq g
//
LOCUS       XP_061011845             371 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-1 receptor-like 1 isoform X3 [Dama dama].
ACCESSION   XP_061011845
VERSION     XP_061011845.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155862.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..371
                     /product="interleukin-1 receptor-like 1 isoform X3"
                     /calculated_mol_wt=42408
     Region          <101..134
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          101..104
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          115..120
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          128..131
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          195..350
                     /region_name="TIR"
                     /note="TIR domain; pfam01582"
                     /db_xref="CDD:396246"
     CDS             1..371
                     /gene="IL1RL1"
                     /coded_by="XM_061155862.1:491..1606"
                     /db_xref="GeneID:133065131"
ORIGIN      
        1 mhneygvkyi vtatrsftvt eeqgfslppe ikapaqneik eveigkptni tclacfgkgh
       61 qvmaeafwrv ngsevknfse triqvmqelm qsgeltcrra vlkiedvree dltwkydcla
      121 mnfhgfitht itlrrknpmd qqstyymlag fsllllling lviilkvfwi eiilfwrdia
      181 rpsktrndgk iydayviypr scknspegas sveyfvhqil pdvlenkcgy nlciygrdll
      241 pgqdvastve tsirmsrrhl filtaeilhs keftyereia lhsaliqqds kailiemeal
      301 cppgglqlee lqdslkhlik vqgtikwred dvanrrslns kfwkhvryhm ppapsrlprk
      361 tpslaslsaq g
//
LOCUS       XP_061011846             591 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-1 receptor-like 2 [Dama dama].
ACCESSION   XP_061011846
VERSION     XP_061011846.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155863.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..591
                     /product="interleukin-1 receptor-like 2"
                     /calculated_mol_wt=67343
     Region          28..121
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          46..50
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          61..65
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          86..90
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          100..105
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          113..116
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          139..226
                     /region_name="Ig2_IL1R-like"
                     /note="Second immunoglobulin (Ig)-like domain of
                     interleukin-1 receptor (IL1R), and similar domains;
                     cd05757"
                     /db_xref="CDD:409415"
     Site            order(139..140,142..145,151,156,158,187,225)
                     /site_type="other"
                     /note="antagonist binding site [polypeptide binding]"
                     /db_xref="CDD:409415"
     Region          140..145
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409415"
     Region          150..154
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409415"
     Region          166..171
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409415"
     Region          174..176
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409415"
     Region          180..184
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409415"
     Region          186..191
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409415"
     Region          200..209
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409415"
     Region          212..225
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409415"
     Region          235..335
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          253..257
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          266..272
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          305..308
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          321..326
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          330..333
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          394..544
                     /region_name="TIR"
                     /note="TIR domain; pfam01582"
                     /db_xref="CDD:396246"
     CDS             1..591
                     /gene="IL1RL2"
                     /coded_by="XM_061155863.1:88..1863"
                     /db_xref="GeneID:133065133"
ORIGIN      
        1 mpdsgadrgm lflllcvgsi alprfirada cedltlqeta svdqptafnc iyslptsgki
       61 damwykypsk ipiskntqsr ihqdqnwilf lpvkgedsgi yqcltndtdi cprmqvnltv
      121 fekhwcgasg nselnmpyey kqilqvgrdd ilichlnfpn nfyldsvkwy kdcieieger
      181 fisrgkkllv knvsledrgn yecqasltha kkqhtvfnsi svtvtekvgn ggripkiiyp
      241 knnsievkpg smlivncnit dtrdntnprc wrvnntlvdd yygdskriqe gienytifpe
      301 hifytvnitf levkmedygr pfvchagvsa ayfilrlpvp dfrayliggl liltgavvsa
      361 mfiynmfkid ivlwyrssfh sagpiedgkl ydayvlypkp qresqshdvd tlvlkilpev
      421 lekqcgyklf ifgrdefpgq avvnvideni rlcrrliivi dpdelsfdll knlseeqiav
      481 ysaliqdgik vilielgkvn dytalpesiq yikqkhgavr wsgdfteqsq caktefwkkv
      541 ryrmppkrwp psppvqllkh tpfdltagkw eartgfispd gknifpsvvh s
//
LOCUS       XP_061011847             573 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-1 receptor type 1 isoform X1 [Dama dama].
ACCESSION   XP_061011847
VERSION     XP_061011847.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155864.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..573
                     /product="interleukin-1 receptor type 1 isoform X1"
                     /calculated_mol_wt=65636
     Region          24..114
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          40..44
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409583"
     Region          54..58
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409583"
     Region          79..83
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409583"
     Region          93..98
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409583"
     Region          106..109
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409583"
     Region          128..219
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          138..142
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409586"
     Region          157..161
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409586"
     Region          179..183
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409586"
     Region          193..198
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409586"
     Region          210..213
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409586"
     Region          226..329
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          244..248
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          257..261
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          294..298
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          309..314
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          322..325
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          384..540
                     /region_name="TIR"
                     /note="Toll - interleukin 1 - resistance; smart00255"
                     /db_xref="CDD:214587"
     CDS             1..573
                     /gene="IL1R1"
                     /coded_by="XM_061155864.1:704..2425"
                     /db_xref="GeneID:133065136"
ORIGIN      
        1 mkvllrllcv itllipslea dkceeheeki tlvssaheid arscplitsv rrepitwykn
       61 dsttpvster asrihqhedk lwfvpaevgd sgayycsvrn styclkikiv aefvqhepnm
      121 cynertvftq rlltagdgql vcpyldflkd ennelpqvqw ykdckpllld nvnfagvtnk
      181 liitsvntah sghytcrasy thlgkqyrvt raiklitlek srntkpeivs panetmevvl
      241 gswlqlicnv tgrisnyvyw kwngsvisrh tpvleedfii venplnrrrs tvlarlnisk
      301 veskfflhpf tclakntegi stayiqlihp vpdfqkptvg ifvmltlvit cslciykvfk
      361 vdivlwyrds fydflpkkvs dgktydayil cpktpgegpt cnsdifvfkv mpevlekqcg
      421 yklficgrdd yvgesivevv nenvkksrrl iiilvpetsg fswlgnssee qvamynaliq
      481 egikvvllel ekipdyekmp esikfikqkq gvirwsgdfr egsqsmnsrf wkkvryhmpv
      541 qrqrplskhq llspatllds kekrpmevhv plg
//
LOCUS       XP_061011848             573 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-1 receptor type 1 isoform X1 [Dama dama].
ACCESSION   XP_061011848
VERSION     XP_061011848.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155865.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..573
                     /product="interleukin-1 receptor type 1 isoform X1"
                     /calculated_mol_wt=65636
     Region          24..114
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          40..44
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409583"
     Region          54..58
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409583"
     Region          79..83
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409583"
     Region          93..98
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409583"
     Region          106..109
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409583"
     Region          128..219
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          138..142
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409586"
     Region          157..161
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409586"
     Region          179..183
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409586"
     Region          193..198
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409586"
     Region          210..213
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409586"
     Region          226..329
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          244..248
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          257..261
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          294..298
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          309..314
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          322..325
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          384..540
                     /region_name="TIR"
                     /note="Toll - interleukin 1 - resistance; smart00255"
                     /db_xref="CDD:214587"
     CDS             1..573
                     /gene="IL1R1"
                     /coded_by="XM_061155865.1:602..2323"
                     /db_xref="GeneID:133065136"
ORIGIN      
        1 mkvllrllcv itllipslea dkceeheeki tlvssaheid arscplitsv rrepitwykn
       61 dsttpvster asrihqhedk lwfvpaevgd sgayycsvrn styclkikiv aefvqhepnm
      121 cynertvftq rlltagdgql vcpyldflkd ennelpqvqw ykdckpllld nvnfagvtnk
      181 liitsvntah sghytcrasy thlgkqyrvt raiklitlek srntkpeivs panetmevvl
      241 gswlqlicnv tgrisnyvyw kwngsvisrh tpvleedfii venplnrrrs tvlarlnisk
      301 veskfflhpf tclakntegi stayiqlihp vpdfqkptvg ifvmltlvit cslciykvfk
      361 vdivlwyrds fydflpkkvs dgktydayil cpktpgegpt cnsdifvfkv mpevlekqcg
      421 yklficgrdd yvgesivevv nenvkksrrl iiilvpetsg fswlgnssee qvamynaliq
      481 egikvvllel ekipdyekmp esikfikqkq gvirwsgdfr egsqsmnsrf wkkvryhmpv
      541 qrqrplskhq llspatllds kekrpmevhv plg
//
LOCUS       XP_061011849             573 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-1 receptor type 1 isoform X1 [Dama dama].
ACCESSION   XP_061011849
VERSION     XP_061011849.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155866.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..573
                     /product="interleukin-1 receptor type 1 isoform X1"
                     /calculated_mol_wt=65636
     Region          24..114
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          40..44
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409583"
     Region          54..58
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409583"
     Region          79..83
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409583"
     Region          93..98
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409583"
     Region          106..109
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409583"
     Region          128..219
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          138..142
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409586"
     Region          157..161
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409586"
     Region          179..183
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409586"
     Region          193..198
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409586"
     Region          210..213
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409586"
     Region          226..329
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          244..248
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          257..261
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          294..298
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          309..314
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          322..325
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          384..540
                     /region_name="TIR"
                     /note="Toll - interleukin 1 - resistance; smart00255"
                     /db_xref="CDD:214587"
     CDS             1..573
                     /gene="IL1R1"
                     /coded_by="XM_061155866.1:381..2102"
                     /db_xref="GeneID:133065136"
ORIGIN      
        1 mkvllrllcv itllipslea dkceeheeki tlvssaheid arscplitsv rrepitwykn
       61 dsttpvster asrihqhedk lwfvpaevgd sgayycsvrn styclkikiv aefvqhepnm
      121 cynertvftq rlltagdgql vcpyldflkd ennelpqvqw ykdckpllld nvnfagvtnk
      181 liitsvntah sghytcrasy thlgkqyrvt raiklitlek srntkpeivs panetmevvl
      241 gswlqlicnv tgrisnyvyw kwngsvisrh tpvleedfii venplnrrrs tvlarlnisk
      301 veskfflhpf tclakntegi stayiqlihp vpdfqkptvg ifvmltlvit cslciykvfk
      361 vdivlwyrds fydflpkkvs dgktydayil cpktpgegpt cnsdifvfkv mpevlekqcg
      421 yklficgrdd yvgesivevv nenvkksrrl iiilvpetsg fswlgnssee qvamynaliq
      481 egikvvllel ekipdyekmp esikfikqkq gvirwsgdfr egsqsmnsrf wkkvryhmpv
      541 qrqrplskhq llspatllds kekrpmevhv plg
//
LOCUS       XP_061011850             573 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-1 receptor type 1 isoform X1 [Dama dama].
ACCESSION   XP_061011850
VERSION     XP_061011850.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155867.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..573
                     /product="interleukin-1 receptor type 1 isoform X1"
                     /calculated_mol_wt=65636
     Region          24..114
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          40..44
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409583"
     Region          54..58
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409583"
     Region          79..83
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409583"
     Region          93..98
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409583"
     Region          106..109
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409583"
     Region          128..219
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          138..142
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409586"
     Region          157..161
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409586"
     Region          179..183
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409586"
     Region          193..198
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409586"
     Region          210..213
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409586"
     Region          226..329
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          244..248
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          257..261
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          294..298
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          309..314
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          322..325
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          384..540
                     /region_name="TIR"
                     /note="Toll - interleukin 1 - resistance; smart00255"
                     /db_xref="CDD:214587"
     CDS             1..573
                     /gene="IL1R1"
                     /coded_by="XM_061155867.1:279..2000"
                     /db_xref="GeneID:133065136"
ORIGIN      
        1 mkvllrllcv itllipslea dkceeheeki tlvssaheid arscplitsv rrepitwykn
       61 dsttpvster asrihqhedk lwfvpaevgd sgayycsvrn styclkikiv aefvqhepnm
      121 cynertvftq rlltagdgql vcpyldflkd ennelpqvqw ykdckpllld nvnfagvtnk
      181 liitsvntah sghytcrasy thlgkqyrvt raiklitlek srntkpeivs panetmevvl
      241 gswlqlicnv tgrisnyvyw kwngsvisrh tpvleedfii venplnrrrs tvlarlnisk
      301 veskfflhpf tclakntegi stayiqlihp vpdfqkptvg ifvmltlvit cslciykvfk
      361 vdivlwyrds fydflpkkvs dgktydayil cpktpgegpt cnsdifvfkv mpevlekqcg
      421 yklficgrdd yvgesivevv nenvkksrrl iiilvpetsg fswlgnssee qvamynaliq
      481 egikvvllel ekipdyekmp esikfikqkq gvirwsgdfr egsqsmnsrf wkkvryhmpv
      541 qrqrplskhq llspatllds kekrpmevhv plg
//
LOCUS       XP_061011851             573 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-1 receptor type 1 isoform X1 [Dama dama].
ACCESSION   XP_061011851
VERSION     XP_061011851.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155868.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..573
                     /product="interleukin-1 receptor type 1 isoform X1"
                     /calculated_mol_wt=65636
     Region          24..114
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          40..44
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409583"
     Region          54..58
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409583"
     Region          79..83
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409583"
     Region          93..98
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409583"
     Region          106..109
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409583"
     Region          128..219
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          138..142
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409586"
     Region          157..161
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409586"
     Region          179..183
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409586"
     Region          193..198
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409586"
     Region          210..213
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409586"
     Region          226..329
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          244..248
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          257..261
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          294..298
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          309..314
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          322..325
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          384..540
                     /region_name="TIR"
                     /note="Toll - interleukin 1 - resistance; smart00255"
                     /db_xref="CDD:214587"
     CDS             1..573
                     /gene="IL1R1"
                     /coded_by="XM_061155868.1:700..2421"
                     /db_xref="GeneID:133065136"
ORIGIN      
        1 mkvllrllcv itllipslea dkceeheeki tlvssaheid arscplitsv rrepitwykn
       61 dsttpvster asrihqhedk lwfvpaevgd sgayycsvrn styclkikiv aefvqhepnm
      121 cynertvftq rlltagdgql vcpyldflkd ennelpqvqw ykdckpllld nvnfagvtnk
      181 liitsvntah sghytcrasy thlgkqyrvt raiklitlek srntkpeivs panetmevvl
      241 gswlqlicnv tgrisnyvyw kwngsvisrh tpvleedfii venplnrrrs tvlarlnisk
      301 veskfflhpf tclakntegi stayiqlihp vpdfqkptvg ifvmltlvit cslciykvfk
      361 vdivlwyrds fydflpkkvs dgktydayil cpktpgegpt cnsdifvfkv mpevlekqcg
      421 yklficgrdd yvgesivevv nenvkksrrl iiilvpetsg fswlgnssee qvamynaliq
      481 egikvvllel ekipdyekmp esikfikqkq gvirwsgdfr egsqsmnsrf wkkvryhmpv
      541 qrqrplskhq llspatllds kekrpmevhv plg
//
LOCUS       XP_061011852             573 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-1 receptor type 1 isoform X1 [Dama dama].
ACCESSION   XP_061011852
VERSION     XP_061011852.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155869.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..573
                     /product="interleukin-1 receptor type 1 isoform X1"
                     /calculated_mol_wt=65636
     Region          24..114
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          40..44
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409583"
     Region          54..58
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409583"
     Region          79..83
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409583"
     Region          93..98
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409583"
     Region          106..109
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409583"
     Region          128..219
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          138..142
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409586"
     Region          157..161
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409586"
     Region          179..183
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409586"
     Region          193..198
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409586"
     Region          210..213
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409586"
     Region          226..329
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          244..248
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          257..261
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          294..298
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          309..314
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          322..325
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          384..540
                     /region_name="TIR"
                     /note="Toll - interleukin 1 - resistance; smart00255"
                     /db_xref="CDD:214587"
     CDS             1..573
                     /gene="IL1R1"
                     /coded_by="XM_061155869.1:282..2003"
                     /db_xref="GeneID:133065136"
ORIGIN      
        1 mkvllrllcv itllipslea dkceeheeki tlvssaheid arscplitsv rrepitwykn
       61 dsttpvster asrihqhedk lwfvpaevgd sgayycsvrn styclkikiv aefvqhepnm
      121 cynertvftq rlltagdgql vcpyldflkd ennelpqvqw ykdckpllld nvnfagvtnk
      181 liitsvntah sghytcrasy thlgkqyrvt raiklitlek srntkpeivs panetmevvl
      241 gswlqlicnv tgrisnyvyw kwngsvisrh tpvleedfii venplnrrrs tvlarlnisk
      301 veskfflhpf tclakntegi stayiqlihp vpdfqkptvg ifvmltlvit cslciykvfk
      361 vdivlwyrds fydflpkkvs dgktydayil cpktpgegpt cnsdifvfkv mpevlekqcg
      421 yklficgrdd yvgesivevv nenvkksrrl iiilvpetsg fswlgnssee qvamynaliq
      481 egikvvllel ekipdyekmp esikfikqkq gvirwsgdfr egsqsmnsrf wkkvryhmpv
      541 qrqrplskhq llspatllds kekrpmevhv plg
//
LOCUS       XP_061011853             573 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-1 receptor type 1 isoform X1 [Dama dama].
ACCESSION   XP_061011853
VERSION     XP_061011853.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155870.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..573
                     /product="interleukin-1 receptor type 1 isoform X1"
                     /calculated_mol_wt=65636
     Region          24..114
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          40..44
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409583"
     Region          54..58
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409583"
     Region          79..83
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409583"
     Region          93..98
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409583"
     Region          106..109
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409583"
     Region          128..219
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          138..142
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409586"
     Region          157..161
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409586"
     Region          179..183
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409586"
     Region          193..198
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409586"
     Region          210..213
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409586"
     Region          226..329
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          244..248
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          257..261
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          294..298
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          309..314
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          322..325
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          384..540
                     /region_name="TIR"
                     /note="Toll - interleukin 1 - resistance; smart00255"
                     /db_xref="CDD:214587"
     CDS             1..573
                     /gene="IL1R1"
                     /coded_by="XM_061155870.1:276..1997"
                     /db_xref="GeneID:133065136"
ORIGIN      
        1 mkvllrllcv itllipslea dkceeheeki tlvssaheid arscplitsv rrepitwykn
       61 dsttpvster asrihqhedk lwfvpaevgd sgayycsvrn styclkikiv aefvqhepnm
      121 cynertvftq rlltagdgql vcpyldflkd ennelpqvqw ykdckpllld nvnfagvtnk
      181 liitsvntah sghytcrasy thlgkqyrvt raiklitlek srntkpeivs panetmevvl
      241 gswlqlicnv tgrisnyvyw kwngsvisrh tpvleedfii venplnrrrs tvlarlnisk
      301 veskfflhpf tclakntegi stayiqlihp vpdfqkptvg ifvmltlvit cslciykvfk
      361 vdivlwyrds fydflpkkvs dgktydayil cpktpgegpt cnsdifvfkv mpevlekqcg
      421 yklficgrdd yvgesivevv nenvkksrrl iiilvpetsg fswlgnssee qvamynaliq
      481 egikvvllel ekipdyekmp esikfikqkq gvirwsgdfr egsqsmnsrf wkkvryhmpv
      541 qrqrplskhq llspatllds kekrpmevhv plg
//
LOCUS       XP_061011854             245 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-1 receptor type 1 isoform X2 [Dama dama].
ACCESSION   XP_061011854
VERSION     XP_061011854.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155871.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..245
                     /product="interleukin-1 receptor type 1 isoform X2"
                     /calculated_mol_wt=27956
     Region          24..114
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          40..44
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409583"
     Region          54..58
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409583"
     Region          79..83
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409583"
     Region          93..98
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409583"
     Region          106..109
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409583"
     Region          128..219
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          138..142
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409586"
     Region          157..161
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409586"
     Region          179..183
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409586"
     Region          193..198
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409586"
     Region          210..213
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409586"
     CDS             1..245
                     /gene="IL1R1"
                     /coded_by="XM_061155871.1:710..1447"
                     /db_xref="GeneID:133065136"
ORIGIN      
        1 mkvllrllcv itllipslea dkceeheeki tlvssaheid arscplitsv rrepitwykn
       61 dsttpvster asrihqhedk lwfvpaevgd sgayycsvrn styclkikiv aefvqhepnm
      121 cynertvftq rlltagdgql vcpyldflkd ennelpqvqw ykdckpllld nvnfagvtnk
      181 liitsvntah sghytcrasy thlgkqyrvt raiklitlek srntkpeivs panetmevvl
      241 ewril
//
LOCUS       XP_061011855             425 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-1 receptor type 2 isoform X1 [Dama dama].
ACCESSION   XP_061011855
VERSION     XP_061011855.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155872.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..425
                     /product="interleukin-1 receptor type 2 isoform X1"
                     /calculated_mol_wt=47810
     Region          26..349
                     /region_name="PHA02785"
                     /note="IL-beta-binding protein; Provisional"
                     /db_xref="CDD:165149"
     CDS             1..425
                     /gene="IL1R2"
                     /coded_by="XM_061155872.1:352..1629"
                     /db_xref="GeneID:133065137"
ORIGIN      
        1 mqscrpcwag lavsppcvlq kllgamflls vlimgvspfa vqsedhtvaa gscrfhgrhp
       61 ktwfkvegep lvlrcpqvlh westsahvnv twhrndsava vpgeeesrvw vqdgalwivp
      121 asqadsgtyi ctvrnasycd kmsvelrvfe kteasvplif ypqiiplsas gllvcpdlse
      181 fidnkadvki qwykdsvpld qdnkkflsvr gtrllvnnvs medagyytca mtfahkgrqy
      241 nitrniklqv kkrdeetipv iisphqtisa slgsrltipc kvflgagiht ttllwwtann
      301 tliedayhgg rvtegerqay sennenyiev plifdpvrre dlhtdfkcvv rntmsfqtlr
      361 ttvkeaatfs weimlaplfl vvlvlggiwm hrrykcrtgk dyglmelktg hpdsqsypsk
      421 ikeik
//
LOCUS       XP_061011856             400 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-1 receptor type 2 isoform X2 [Dama dama].
ACCESSION   XP_061011856
VERSION     XP_061011856.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155873.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..400
                     /product="interleukin-1 receptor type 2 isoform X2"
                     /calculated_mol_wt=45199
     Region          1..324
                     /region_name="PHA02785"
                     /note="IL-beta-binding protein; Provisional"
                     /db_xref="CDD:165149"
     CDS             1..400
                     /gene="IL1R2"
                     /coded_by="XM_061155873.1:405..1607"
                     /db_xref="GeneID:133065137"
ORIGIN      
        1 mfllsvlimg vspfavqsed htvaagscrf hgrhpktwfk vegeplvlrc pqvlhwests
       61 ahvnvtwhrn dsavavpgee esrvwvqdga lwivpasqad sgtyictvrn asycdkmsve
      121 lrvfekteas vplifypqii plsasgllvc pdlsefidnk advkiqwykd svpldqdnkk
      181 flsvrgtrll vnnvsmedag yytcamtfah kgrqynitrn iklqvkkrde etipviisph
      241 qtisaslgsr ltipckvflg agihtttllw wtanntlied ayhggrvteg erqaysenne
      301 nyievplifd pvrredlhtd fkcvvrntms fqtlrttvke aatfsweiml aplflvvlvl
      361 ggiwmhrryk crtgkdyglm elktghpdsq sypskikeik
//
LOCUS       XP_061011857            1371 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X1
            [Dama dama].
ACCESSION   XP_061011857
VERSION     XP_061011857.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155874.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1371
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1371
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X1"
                     /calculated_mol_wt=155995
     Region          8..289
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(31..34,37,39,52,54,83,105..108,153,157..158,160,
                     170..171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          1053..1351
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1371
                     /gene="MAP4K4"
                     /coded_by="XM_061155874.1:103..4218"
                     /db_xref="GeneID:133065140"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhihhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eeapeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee lerrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 llqqqllqeq amllecrwre leehrqaerl qrqlqqeqay llslqhdprr pppppdrska
      541 glhepkaqhe padrareved rfrktnhssp eaqskqtgrv leppvpsrse sfssgdsesv
      601 hpalqrpaep qvqwshlasl knnvspvsrs hsfsdpsppk fahhhlrsqd pcppsrsevl
      661 sqssdskaev pdpaqkawsr sdsdevpprv pvrttsrspv lsrrdsplqg sgqqnnqagq
      721 rnstssiepr llwervekla prpgsgsssg ssnsgsqpgs hpgsqsgsge rfrvrsssks
      781 egspsqrlen aakkpedkke vfrplkpadl tllakelrav edvrpphkvt dysssseesg
      841 ttdeedddve qegaeeptsg pedtraassl nlsngetesv ktmvvhddve sepaltpske
      901 gtlivrqsav dqkrashhes ngfagrihll pdllqqshss stsstsssps ssqptptmsp
      961 qtpqdklttn etqsasntlq khkssssftp fidprllqis pssgttvtsv vgfscdgmrp
     1021 eamrqdptrk gsvvnvnptn trpqsdtpei rkykkrfnse ilcaalwgvn llvgtesglm
     1081 lldrsgqgkv yplinrrrfq qmdvleglnv lvtisgkkdk lrvyylswlr nkilhndpev
     1141 ekkqgwttvg dlegcvhykv vkyerikflv ialkssvevy awapkpyhkf mafksfgelv
     1201 hkpllvdltv eegqrlkviy gscagfhavd vdsgsvydiy lpthiqcsik phaiiilpnt
     1261 dgmellvcye degvyvntyg ritkdvvlqw gemptsvayi rsnqtmgwge kaieirsvet
     1321 ghldgvfmhk raqrlkflce rndkvffasv rsggssqvyf mtlgrtslls w
//
LOCUS       XP_061011858            1370 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X2
            [Dama dama].
ACCESSION   XP_061011858
VERSION     XP_061011858.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155875.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1370
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1370
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X2"
                     /calculated_mol_wt=155907
     Region          8..289
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(31..34,37,39,52,54,83,105..108,153,157..158,160,
                     170..171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          1052..1350
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1370
                     /gene="MAP4K4"
                     /coded_by="XM_061155875.1:103..4215"
                     /db_xref="GeneID:133065140"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhihhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eeapeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee lerrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 llqqqllqeq amllecrwre leehrqaerl qrqlqqeqay llslqhdprr pppppdrska
      541 glhepkaqhe padrareved rfrktnhssp eaqskqtgrv leppvpsrse sfssgdsesv
      601 hpalqrpaep qvqwshlasl knnvspvsrs hsfsdpsppk fahhhlrsqd pcppsrsevl
      661 sqssdskaev pdpaqkawsr sdsdevpprv pvrttsrspv lsrrdsplqg sgqqnnqagq
      721 rnstsieprl lwerveklap rpgsgsssgs snsgsqpgsh pgsqsgsger frvrssskse
      781 gspsqrlena akkpedkkev frplkpadlt llakelrave dvrpphkvtd ysssseesgt
      841 tdeedddveq egaeeptsgp edtraassln lsngetesvk tmvvhddves epaltpskeg
      901 tlivrqsavd qkrashhesn gfagrihllp dllqqshsss tsstssspss sqptptmspq
      961 tpqdklttne tqsasntlqk hkssssftpf idprllqisp ssgttvtsvv gfscdgmrpe
     1021 amrqdptrkg svvnvnptnt rpqsdtpeir kykkrfnsei lcaalwgvnl lvgtesglml
     1081 ldrsgqgkvy plinrrrfqq mdvleglnvl vtisgkkdkl rvyylswlrn kilhndpeve
     1141 kkqgwttvgd legcvhykvv kyerikflvi alkssvevya wapkpyhkfm afksfgelvh
     1201 kpllvdltve egqrlkviyg scagfhavdv dsgsvydiyl pthiqcsikp haiiilpntd
     1261 gmellvcyed egvyvntygr itkdvvlqwg emptsvayir snqtmgwgek aieirsvetg
     1321 hldgvfmhkr aqrlkflcer ndkvffasvr sggssqvyfm tlgrtsllsw
//
LOCUS       XP_061011859            1369 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X3
            [Dama dama].
ACCESSION   XP_061011859
VERSION     XP_061011859.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155876.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1369
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1369
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X3"
                     /calculated_mol_wt=155767
     Region          8..289
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(31..34,37,39,52,54,83,105..108,153,157..158,160,
                     170..171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          1051..1349
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1369
                     /gene="MAP4K4"
                     /coded_by="XM_061155876.1:103..4212"
                     /db_xref="GeneID:133065140"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhihhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eeapeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee lerrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 llqqqllqeq amllecrwre leehrqaerl qrqlqqeqay llslqhdprr pppppdrska
      541 glhepkaqhe padrareved rfrktnhssp eaqskqtgrv leppvpsrse sfssgdsesv
      601 hpalqrpaep qwshlaslkn nvspvsrshs fsdpsppkfa hhhlrsqdpc ppsrsevlsq
      661 ssdskaevpd paqkawsrsd sdevpprvpv rttsrspvls rrdsplqgsg qqnnqagqrn
      721 stssieprll werveklapr pgsgsssgss nsgsqpgshp gsqsgsgerf rvrssskseg
      781 spsqrlenaa kkpedkkevf rplkpadltl lakelraved vrpphkvtdy sssseesgtt
      841 deedddveqe gaeeptsgpe dtraasslnl sngetesvkt mvvhddvese paltpskegt
      901 livrqsavdq krashhesng fagrihllpd llqqshssst sstssspsss qptptmspqt
      961 pqdklttnet qsasntlqkh kssssftpfi dprllqisps sgttvtsvvg fscdgmrpea
     1021 mrqdptrkgs vvnvnptntr pqsdtpeirk ykkrfnseil caalwgvnll vgtesglmll
     1081 drsgqgkvyp linrrrfqqm dvleglnvlv tisgkkdklr vyylswlrnk ilhndpevek
     1141 kqgwttvgdl egcvhykvvk yerikflvia lkssvevyaw apkpyhkfma fksfgelvhk
     1201 pllvdltvee gqrlkviygs cagfhavdvd sgsvydiylp thiqcsikph aiiilpntdg
     1261 mellvcyede gvyvntygri tkdvvlqwge mptsvayirs nqtmgwgeka ieirsvetgh
     1321 ldgvfmhkra qrlkflcern dkvffasvrs ggssqvyfmt lgrtsllsw
//
LOCUS       XP_061011860            1340 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X4
            [Dama dama].
ACCESSION   XP_061011860
VERSION     XP_061011860.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155877.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1340
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1340
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X4"
                     /calculated_mol_wt=152044
     Region          8..289
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(31..34,37,39,52,54,83,105..108,153,157..158,160,
                     170..171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          1022..1320
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1340
                     /gene="MAP4K4"
                     /coded_by="XM_061155877.1:103..4125"
                     /db_xref="GeneID:133065140"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhihhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eeapeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee lerrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 llqqqllqeq amllhdprrp ppppdrskag lhepkaqhep adrarevedr frktnhsspe
      541 aqskqtgrvl eppvpsrses fssgdsesvh palqrpaepq vqwshlaslk nnvspvsrsh
      601 sfsdpsppkf ahhhlrsqdp cppsrsevls qssdskaevp dpaqkawsrs dsdevpprvp
      661 vrttsrspvl srrdsplqgs gqqnnqagqr nstssieprl lwerveklap rpgsgsssgs
      721 snsgsqpgsh pgsqsgsger frvrssskse gspsqrlena akkpedkkev frplkpadlt
      781 llakelrave dvrpphkvtd ysssseesgt tdeedddveq egaeeptsgp edtraassln
      841 lsngetesvk tmvvhddves epaltpskeg tlivrqsavd qkrashhesn gfagrihllp
      901 dllqqshsss tsstssspss sqptptmspq tpqdklttne tqsasntlqk hkssssftpf
      961 idprllqisp ssgttvtsvv gfscdgmrpe amrqdptrkg svvnvnptnt rpqsdtpeir
     1021 kykkrfnsei lcaalwgvnl lvgtesglml ldrsgqgkvy plinrrrfqq mdvleglnvl
     1081 vtisgkkdkl rvyylswlrn kilhndpeve kkqgwttvgd legcvhykvv kyerikflvi
     1141 alkssvevya wapkpyhkfm afksfgelvh kpllvdltve egqrlkviyg scagfhavdv
     1201 dsgsvydiyl pthiqcsikp haiiilpntd gmellvcyed egvyvntygr itkdvvlqwg
     1261 emptsvayir snqtmgwgek aieirsvetg hldgvfmhkr aqrlkflcer ndkvffasvr
     1321 sggssqvyfm tlgrtsllsw
//
LOCUS       XP_061011861            1339 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X5
            [Dama dama].
ACCESSION   XP_061011861
VERSION     XP_061011861.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155878.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1339
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1339
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X5"
                     /calculated_mol_wt=151957
     Region          8..289
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(31..34,37,39,52,54,83,105..108,153,157..158,160,
                     170..171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          1021..1319
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1339
                     /gene="MAP4K4"
                     /coded_by="XM_061155878.1:103..4122"
                     /db_xref="GeneID:133065140"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhihhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eeapeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee lerrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 llqqqllqeq amllhdprrp ppppdrskag lhepkaqhep adrarevedr frktnhsspe
      541 aqskqtgrvl eppvpsrses fssgdsesvh palqrpaepq vqwshlaslk nnvspvsrsh
      601 sfsdpsppkf ahhhlrsqdp cppsrsevls qssdskaevp dpaqkawsrs dsdevpprvp
      661 vrttsrspvl srrdsplqgs gqqnnqagqr nstsieprll werveklapr pgsgsssgss
      721 nsgsqpgshp gsqsgsgerf rvrssskseg spsqrlenaa kkpedkkevf rplkpadltl
      781 lakelraved vrpphkvtdy sssseesgtt deedddveqe gaeeptsgpe dtraasslnl
      841 sngetesvkt mvvhddvese paltpskegt livrqsavdq krashhesng fagrihllpd
      901 llqqshssst sstssspsss qptptmspqt pqdklttnet qsasntlqkh kssssftpfi
      961 dprllqisps sgttvtsvvg fscdgmrpea mrqdptrkgs vvnvnptntr pqsdtpeirk
     1021 ykkrfnseil caalwgvnll vgtesglmll drsgqgkvyp linrrrfqqm dvleglnvlv
     1081 tisgkkdklr vyylswlrnk ilhndpevek kqgwttvgdl egcvhykvvk yerikflvia
     1141 lkssvevyaw apkpyhkfma fksfgelvhk pllvdltvee gqrlkviygs cagfhavdvd
     1201 sgsvydiylp thiqcsikph aiiilpntdg mellvcyede gvyvntygri tkdvvlqwge
     1261 mptsvayirs nqtmgwgeka ieirsvetgh ldgvfmhkra qrlkflcern dkvffasvrs
     1321 ggssqvyfmt lgrtsllsw
//
LOCUS       XP_061011862            1317 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X6
            [Dama dama].
ACCESSION   XP_061011862
VERSION     XP_061011862.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155879.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1317
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X6"
                     /calculated_mol_wt=150054
     Region          8..289
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(31..34,37,39,52,54,83,105..108,153,157..158,160,
                     170..171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          999..1297
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1317
                     /gene="MAP4K4"
                     /coded_by="XM_061155879.1:102..4055"
                     /db_xref="GeneID:133065140"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhihhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eeapeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee lerrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 llqqqllqeq amllecrwre leehrqaerl qrqlqqeqay llslqhdprr pppppdrska
      541 glhepkaqhe padrarevqw shlaslknnv spvsrshsfs dpsppkfahh hlrsqdpcpp
      601 srsevlsqss dskaevpdpa qkawsrsdsd evpprvpvrt tsrspvlsrr dsplqgsgqq
      661 nnqagqrnst ssieprllwe rveklaprpg sgsssgssns gsqpgshpgs qsgsgerfrv
      721 rsssksegsp sqrlenaakk pedkkevfrp lkpadltlla kelravedvr pphkvtdyss
      781 sseesgttde edddveqega eeptsgpedt raasslnlsn getesvktmv vhddvesepa
      841 ltpskegtli vrqsavdqkr ashhesngfa grihllpdll qqshssstss tssspsssqp
      901 tptmspqtpq dklttnetqs asntlqkhks sssftpfidp rllqispssg ttvtsvvgfs
      961 cdgmrpeamr qdptrkgsvv nvnptntrpq sdtpeirkyk krfnseilca alwgvnllvg
     1021 tesglmlldr sgqgkvypli nrrrfqqmdv leglnvlvti sgkkdklrvy ylswlrnkil
     1081 hndpevekkq gwttvgdleg cvhykvvkye rikflvialk ssvevyawap kpyhkfmafk
     1141 sfgelvhkpl lvdltveegq rlkviygsca gfhavdvdsg svydiylpth iqcsikphai
     1201 iilpntdgme llvcyedegv yvntygritk dvvlqwgemp tsvayirsnq tmgwgekaie
     1261 irsvetghld gvfmhkraqr lkflcerndk vffasvrsgg ssqvyfmtlg rtsllsw
//
LOCUS       XP_061011863            1316 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X7
            [Dama dama].
ACCESSION   XP_061011863
VERSION     XP_061011863.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155880.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1316
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1316
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X7"
                     /calculated_mol_wt=149967
     Region          8..289
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(31..34,37,39,52,54,83,105..108,153,157..158,160,
                     170..171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          998..1296
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1316
                     /gene="MAP4K4"
                     /coded_by="XM_061155880.1:102..4052"
                     /db_xref="GeneID:133065140"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhihhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eeapeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee lerrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 llqqqllqeq amllecrwre leehrqaerl qrqlqqeqay llslqhdprr pppppdrska
      541 glhepkaqhe padrarevqw shlaslknnv spvsrshsfs dpsppkfahh hlrsqdpcpp
      601 srsevlsqss dskaevpdpa qkawsrsdsd evpprvpvrt tsrspvlsrr dsplqgsgqq
      661 nnqagqrnst sieprllwer veklaprpgs gsssgssnsg sqpgshpgsq sgsgerfrvr
      721 sssksegsps qrlenaakkp edkkevfrpl kpadltllak elravedvrp phkvtdysss
      781 seesgttdee dddveqegae eptsgpedtr aasslnlsng etesvktmvv hddvesepal
      841 tpskegtliv rqsavdqkra shhesngfag rihllpdllq qshssstsst ssspsssqpt
      901 ptmspqtpqd klttnetqsa sntlqkhkss ssftpfidpr llqispssgt tvtsvvgfsc
      961 dgmrpeamrq dptrkgsvvn vnptntrpqs dtpeirkykk rfnseilcaa lwgvnllvgt
     1021 esglmlldrs gqgkvyplin rrrfqqmdvl eglnvlvtis gkkdklrvyy lswlrnkilh
     1081 ndpevekkqg wttvgdlegc vhykvvkyer ikflvialks svevyawapk pyhkfmafks
     1141 fgelvhkpll vdltveegqr lkviygscag fhavdvdsgs vydiylpthi qcsikphaii
     1201 ilpntdgmel lvcyedegvy vntygritkd vvlqwgempt svayirsnqt mgwgekaiei
     1261 rsvetghldg vfmhkraqrl kflcerndkv ffasvrsggs sqvyfmtlgr tsllsw
//
LOCUS       XP_061011864            1315 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X8
            [Dama dama].
ACCESSION   XP_061011864
VERSION     XP_061011864.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155881.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1315
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1315
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X8"
                     /calculated_mol_wt=149827
     Region          8..289
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(31..34,37,39,52,54,83,105..108,153,157..158,160,
                     170..171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          997..1295
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1315
                     /gene="MAP4K4"
                     /coded_by="XM_061155881.1:102..4049"
                     /db_xref="GeneID:133065140"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhihhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eeapeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee lerrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 llqqqllqeq amllecrwre leehrqaerl qrqlqqeqay llslqhdprr pppppdrska
      541 glhepkaqhe padrarewsh laslknnvsp vsrshsfsdp sppkfahhhl rsqdpcppsr
      601 sevlsqssds kaevpdpaqk awsrsdsdev pprvpvrtts rspvlsrrds plqgsgqqnn
      661 qagqrnstss ieprllwerv eklaprpgsg sssgssnsgs qpgshpgsqs gsgerfrvrs
      721 ssksegspsq rlenaakkpe dkkevfrplk padltllake lravedvrpp hkvtdyssss
      781 eesgttdeed ddveqegaee ptsgpedtra asslnlsnge tesvktmvvh ddvesepalt
      841 pskegtlivr qsavdqkras hhesngfagr ihllpdllqq shssstssts sspsssqptp
      901 tmspqtpqdk lttnetqsas ntlqkhksss sftpfidprl lqispssgtt vtsvvgfscd
      961 gmrpeamrqd ptrkgsvvnv nptntrpqsd tpeirkykkr fnseilcaal wgvnllvgte
     1021 sglmlldrsg qgkvyplinr rrfqqmdvle glnvlvtisg kkdklrvyyl swlrnkilhn
     1081 dpevekkqgw ttvgdlegcv hykvvkyeri kflvialkss vevyawapkp yhkfmafksf
     1141 gelvhkpllv dltveegqrl kviygscagf havdvdsgsv ydiylpthiq csikphaiii
     1201 lpntdgmell vcyedegvyv ntygritkdv vlqwgempts vayirsnqtm gwgekaieir
     1261 svetghldgv fmhkraqrlk flcerndkvf fasvrsggss qvyfmtlgrt sllsw
//
LOCUS       XP_061011865            1314 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X9
            [Dama dama].
ACCESSION   XP_061011865
VERSION     XP_061011865.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155882.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1314
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1314
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X9"
                     /calculated_mol_wt=149740
     Region          8..289
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(31..34,37,39,52,54,83,105..108,153,157..158,160,
                     170..171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          996..1294
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1314
                     /gene="MAP4K4"
                     /coded_by="XM_061155882.1:103..4047"
                     /db_xref="GeneID:133065140"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhihhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eeapeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee lerrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 llqqqllqeq amllecrwre leehrqaerl qrqlqqeqay llslqhdprr pppppdrska
      541 glhepkaqhe padrarewsh laslknnvsp vsrshsfsdp sppkfahhhl rsqdpcppsr
      601 sevlsqssds kaevpdpaqk awsrsdsdev pprvpvrtts rspvlsrrds plqgsgqqnn
      661 qagqrnstsi eprllwerve klaprpgsgs ssgssnsgsq pgshpgsqsg sgerfrvrss
      721 sksegspsqr lenaakkped kkevfrplkp adltllakel ravedvrpph kvtdysssse
      781 esgttdeedd dveqegaeep tsgpedtraa sslnlsnget esvktmvvhd dvesepaltp
      841 skegtlivrq savdqkrash hesngfagri hllpdllqqs hssstsstss spsssqptpt
      901 mspqtpqdkl ttnetqsasn tlqkhkssss ftpfidprll qispssgttv tsvvgfscdg
      961 mrpeamrqdp trkgsvvnvn ptntrpqsdt peirkykkrf nseilcaalw gvnllvgtes
     1021 glmlldrsgq gkvyplinrr rfqqmdvleg lnvlvtisgk kdklrvyyls wlrnkilhnd
     1081 pevekkqgwt tvgdlegcvh ykvvkyerik flvialkssv evyawapkpy hkfmafksfg
     1141 elvhkpllvd ltveegqrlk viygscagfh avdvdsgsvy diylpthiqc sikphaiiil
     1201 pntdgmellv cyedegvyvn tygritkdvv lqwgemptsv ayirsnqtmg wgekaieirs
     1261 vetghldgvf mhkraqrlkf lcerndkvff asvrsggssq vyfmtlgrts llsw
//
LOCUS       XP_061011866            1307 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X10
            [Dama dama].
ACCESSION   XP_061011866
VERSION     XP_061011866.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155883.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1307
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1307
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X10"
                     /calculated_mol_wt=149209
     Region          8..289
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(31..34,37,39,52,54,83,105..108,153,157..158,160,
                     170..171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          989..1287
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1307
                     /gene="MAP4K4"
                     /coded_by="XM_061155883.1:103..4026"
                     /db_xref="GeneID:133065140"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhihhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eeapeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee lerrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 llqqqllqeq amllecrwre leehrqaerl qrqlqqeqay llslqhdprr pppppdrska
      541 glhepkaqhe padrareved rfrktnhssp eaqskqtgrv leppvpsrse sfssgdsesv
      601 hpalqrpaep qvqwshlasl knnvspvsrs hsfsdpsppk fahhhlrsqd pcppsrsevl
      661 sqssdskaev pdpaqkawsr sdsdevpprv pvrttsrspv lsrrdsplqg sgqqnnqagq
      721 rnstssiepr llwervekla prpgsgsssg ssnsgsqpgs hpgsqsgsge rfrvrsssks
      781 egspsqrlen aakkpedkke vfrplkpadl tllakelrav edvrpphkvt dysssseesg
      841 ttdeedddve qegaeeptsg pedtraassl nlsngetesv ktmvvhddve sepaltpske
      901 gtlivrqtqs asntlqkhks sssftpfidp rllqispssg ttvtsvvgfs cdgmrpeamr
      961 qdptrkgsvv nvnptntrpq sdtpeirkyk krfnseilca alwgvnllvg tesglmlldr
     1021 sgqgkvypli nrrrfqqmdv leglnvlvti sgkkdklrvy ylswlrnkil hndpevekkq
     1081 gwttvgdleg cvhykvvkye rikflvialk ssvevyawap kpyhkfmafk sfgelvhkpl
     1141 lvdltveegq rlkviygsca gfhavdvdsg svydiylpth iqcsikphai iilpntdgme
     1201 llvcyedegv yvntygritk dvvlqwgemp tsvayirsnq tmgwgekaie irsvetghld
     1261 gvfmhkraqr lkflcerndk vffasvrsgg ssqvyfmtlg rtsllsw
//
LOCUS       XP_061011867            1293 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X11
            [Dama dama].
ACCESSION   XP_061011867
VERSION     XP_061011867.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155884.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1293
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1293
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X11"
                     /calculated_mol_wt=147388
     Region          8..289
                     /region_name="STKc_MAP4K4_6_N"
                     /note="N-terminal Catalytic domain of the Serine/Threonine
                     Kinases, Mitogen-Activated Protein Kinase Kinase Kinase
                     Kinase 4 and 6; cd06636"
                     /db_xref="CDD:270806"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,153,
                     155..158,160,170..171,174,188..191,193,225,234)
                     /site_type="active"
                     /db_xref="CDD:270806"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,157..158,
                     160,171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270806"
     Site            order(34..35,153,155..157,174,188..191,193,225,234)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270806"
     Site            170..193
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270806"
     Region          975..1273
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1293
                     /gene="MAP4K4"
                     /coded_by="XM_061155884.1:102..3983"
                     /db_xref="GeneID:133065140"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhihhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eeapeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee lerrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 llqqqllqeq amllecrwre leehrqaerl qrqlqqeqay llslqhdprr pppppdrska
      541 glhepkaqhe padrareved rfrktnhssp eaqskqtgrv leppvpsrse sfssgdsesv
      601 hpalqrpaep qvpvrttsrs pvlsrrdspl qgsgqqnnqa gqrnstssie prllwervek
      661 laprpgsgss sgssnsgsqp gshpgsqsgs gerfrvrsss ksegspsqrl enaakkpedk
      721 kevfrplkpa dltllakelr avedvrpphk vtdyssssee sgttdeeddd veqegaeept
      781 sgpedtraas slnlsngete svktmvvhdd vesepaltps kegtlivrqs avdqkrashh
      841 esngfagrih llpdllqqsh ssstsstsss psssqptptm spqtpqdklt tnetqsasnt
      901 lqkhkssssf tpfidprllq ispssgttvt svvgfscdgm rpeamrqdpt rkgsvvnvnp
      961 tntrpqsdtp eirkykkrfn seilcaalwg vnllvgtesg lmlldrsgqg kvyplinrrr
     1021 fqqmdvlegl nvlvtisgkk dklrvyylsw lrnkilhndp evekkqgwtt vgdlegcvhy
     1081 kvvkyerikf lvialkssve vyawapkpyh kfmafksfge lvhkpllvdl tveegqrlkv
     1141 iygscagfha vdvdsgsvyd iylpthiqcs ikphaiiilp ntdgmellvc yedegvyvnt
     1201 ygritkdvvl qwgemptsva yirsnqtmgw gekaieirsv etghldgvfm hkraqrlkfl
     1261 cerndkvffa svrsggssqv yfmtlgrtsl lsw
//
LOCUS       XP_061011868            1292 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X12
            [Dama dama].
ACCESSION   XP_061011868
VERSION     XP_061011868.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155885.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1292
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1292
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X12"
                     /calculated_mol_wt=147301
     Region          8..289
                     /region_name="STKc_MAP4K4_6_N"
                     /note="N-terminal Catalytic domain of the Serine/Threonine
                     Kinases, Mitogen-Activated Protein Kinase Kinase Kinase
                     Kinase 4 and 6; cd06636"
                     /db_xref="CDD:270806"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,153,
                     155..158,160,170..171,174,188..191,193,225,234)
                     /site_type="active"
                     /db_xref="CDD:270806"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,157..158,
                     160,171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270806"
     Site            order(34..35,153,155..157,174,188..191,193,225,234)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270806"
     Site            170..193
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270806"
     Region          974..1272
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1292
                     /gene="MAP4K4"
                     /coded_by="XM_061155885.1:103..3981"
                     /db_xref="GeneID:133065140"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhihhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eeapeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee lerrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 llqqqllqeq amllecrwre leehrqaerl qrqlqqeqay llslqhdprr pppppdrska
      541 glhepkaqhe padrareved rfrktnhssp eaqskqtgrv leppvpsrse sfssgdsesv
      601 hpalqrpaep qvpvrttsrs pvlsrrdspl qgsgqqnnqa gqrnstsiep rllwervekl
      661 aprpgsgsss gssnsgsqpg shpgsqsgsg erfrvrsssk segspsqrle naakkpedkk
      721 evfrplkpad ltllakelra vedvrpphkv tdyssssees gttdeedddv eqegaeepts
      781 gpedtraass lnlsngetes vktmvvhddv esepaltpsk egtlivrqsa vdqkrashhe
      841 sngfagrihl lpdllqqshs sstsstsssp sssqptptms pqtpqdkltt netqsasntl
      901 qkhkssssft pfidprllqi spssgttvts vvgfscdgmr peamrqdptr kgsvvnvnpt
      961 ntrpqsdtpe irkykkrfns eilcaalwgv nllvgtesgl mlldrsgqgk vyplinrrrf
     1021 qqmdvlegln vlvtisgkkd klrvyylswl rnkilhndpe vekkqgwttv gdlegcvhyk
     1081 vvkyerikfl vialkssvev yawapkpyhk fmafksfgel vhkpllvdlt veegqrlkvi
     1141 ygscagfhav dvdsgsvydi ylpthiqcsi kphaiiilpn tdgmellvcy edegvyvnty
     1201 gritkdvvlq wgemptsvay irsnqtmgwg ekaieirsve tghldgvfmh kraqrlkflc
     1261 erndkvffas vrsggssqvy fmtlgrtsll sw
//
LOCUS       XP_061011869            1286 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X13
            [Dama dama].
ACCESSION   XP_061011869
VERSION     XP_061011869.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155886.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1286
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1286
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X13"
                     /calculated_mol_wt=146104
     Region          8..289
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(31..34,37,39,52,54,83,105..108,153,157..158,160,
                     170..171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          968..1266
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1286
                     /gene="MAP4K4"
                     /coded_by="XM_061155886.1:102..3962"
                     /db_xref="GeneID:133065140"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhihhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eeapeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee lerrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 llqqqllqeq amllhdprrp ppppdrskag lhepkaqhep adrarevqws hlaslknnvs
      541 pvsrshsfsd psppkfahhh lrsqdpcpps rsevlsqssd skaevpdpaq kawsrsdsde
      601 vpprvpvrtt srspvlsrrd splqgsgqqn nqagqrnsts sieprllwer veklaprpgs
      661 gsssgssnsg sqpgshpgsq sgsgerfrvr sssksegsps qrlenaakkp edkkevfrpl
      721 kpadltllak elravedvrp phkvtdysss seesgttdee dddveqegae eptsgpedtr
      781 aasslnlsng etesvktmvv hddvesepal tpskegtliv rqsavdqkra shhesngfag
      841 rihllpdllq qshssstsst ssspsssqpt ptmspqtpqd klttnetqsa sntlqkhkss
      901 ssftpfidpr llqispssgt tvtsvvgfsc dgmrpeamrq dptrkgsvvn vnptntrpqs
      961 dtpeirkykk rfnseilcaa lwgvnllvgt esglmlldrs gqgkvyplin rrrfqqmdvl
     1021 eglnvlvtis gkkdklrvyy lswlrnkilh ndpevekkqg wttvgdlegc vhykvvkyer
     1081 ikflvialks svevyawapk pyhkfmafks fgelvhkpll vdltveegqr lkviygscag
     1141 fhavdvdsgs vydiylpthi qcsikphaii ilpntdgmel lvcyedegvy vntygritkd
     1201 vvlqwgempt svayirsnqt mgwgekaiei rsvetghldg vfmhkraqrl kflcerndkv
     1261 ffasvrsggs sqvyfmtlgr tsllsw
//
LOCUS       XP_061011870            1285 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X14
            [Dama dama].
ACCESSION   XP_061011870
VERSION     XP_061011870.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155887.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1285
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1285
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X14"
                     /calculated_mol_wt=146017
     Region          8..289
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(31..34,37,39,52,54,83,105..108,153,157..158,160,
                     170..171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          967..1265
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1285
                     /gene="MAP4K4"
                     /coded_by="XM_061155887.1:102..3959"
                     /db_xref="GeneID:133065140"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhihhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eeapeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee lerrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 llqqqllqeq amllhdprrp ppppdrskag lhepkaqhep adrarevqws hlaslknnvs
      541 pvsrshsfsd psppkfahhh lrsqdpcpps rsevlsqssd skaevpdpaq kawsrsdsde
      601 vpprvpvrtt srspvlsrrd splqgsgqqn nqagqrnsts ieprllwerv eklaprpgsg
      661 sssgssnsgs qpgshpgsqs gsgerfrvrs ssksegspsq rlenaakkpe dkkevfrplk
      721 padltllake lravedvrpp hkvtdyssss eesgttdeed ddveqegaee ptsgpedtra
      781 asslnlsnge tesvktmvvh ddvesepalt pskegtlivr qsavdqkras hhesngfagr
      841 ihllpdllqq shssstssts sspsssqptp tmspqtpqdk lttnetqsas ntlqkhksss
      901 sftpfidprl lqispssgtt vtsvvgfscd gmrpeamrqd ptrkgsvvnv nptntrpqsd
      961 tpeirkykkr fnseilcaal wgvnllvgte sglmlldrsg qgkvyplinr rrfqqmdvle
     1021 glnvlvtisg kkdklrvyyl swlrnkilhn dpevekkqgw ttvgdlegcv hykvvkyeri
     1081 kflvialkss vevyawapkp yhkfmafksf gelvhkpllv dltveegqrl kviygscagf
     1141 havdvdsgsv ydiylpthiq csikphaiii lpntdgmell vcyedegvyv ntygritkdv
     1201 vlqwgempts vayirsnqtm gwgekaieir svetghldgv fmhkraqrlk flcerndkvf
     1261 fasvrsggss qvyfmtlgrt sllsw
//
LOCUS       XP_061011871            1284 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X15
            [Dama dama].
ACCESSION   XP_061011871
VERSION     XP_061011871.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155888.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1284
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1284
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X15"
                     /calculated_mol_wt=145876
     Region          8..289
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(31..34,37,39,52,54,83,105..108,153,157..158,160,
                     170..171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          966..1264
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1284
                     /gene="MAP4K4"
                     /coded_by="XM_061155888.1:102..3956"
                     /db_xref="GeneID:133065140"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhihhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eeapeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee lerrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 llqqqllqeq amllhdprrp ppppdrskag lhepkaqhep adrarewshl aslknnvspv
      541 srshsfsdps ppkfahhhlr sqdpcppsrs evlsqssdsk aevpdpaqka wsrsdsdevp
      601 prvpvrttsr spvlsrrdsp lqgsgqqnnq agqrnstssi eprllwerve klaprpgsgs
      661 ssgssnsgsq pgshpgsqsg sgerfrvrss sksegspsqr lenaakkped kkevfrplkp
      721 adltllakel ravedvrpph kvtdysssse esgttdeedd dveqegaeep tsgpedtraa
      781 sslnlsnget esvktmvvhd dvesepaltp skegtlivrq savdqkrash hesngfagri
      841 hllpdllqqs hssstsstss spsssqptpt mspqtpqdkl ttnetqsasn tlqkhkssss
      901 ftpfidprll qispssgttv tsvvgfscdg mrpeamrqdp trkgsvvnvn ptntrpqsdt
      961 peirkykkrf nseilcaalw gvnllvgtes glmlldrsgq gkvyplinrr rfqqmdvleg
     1021 lnvlvtisgk kdklrvyyls wlrnkilhnd pevekkqgwt tvgdlegcvh ykvvkyerik
     1081 flvialkssv evyawapkpy hkfmafksfg elvhkpllvd ltveegqrlk viygscagfh
     1141 avdvdsgsvy diylpthiqc sikphaiiil pntdgmellv cyedegvyvn tygritkdvv
     1201 lqwgemptsv ayirsnqtmg wgekaieirs vetghldgvf mhkraqrlkf lcerndkvff
     1261 asvrsggssq vyfmtlgrts llsw
//
LOCUS       XP_061011872            1276 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X16
            [Dama dama].
ACCESSION   XP_061011872
VERSION     XP_061011872.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155889.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1276
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1276
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X16"
                     /calculated_mol_wt=145259
     Region          8..289
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(31..34,37,39,52,54,83,105..108,153,157..158,160,
                     170..171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          958..1256
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1276
                     /gene="MAP4K4"
                     /coded_by="XM_061155889.1:103..3933"
                     /db_xref="GeneID:133065140"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhihhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eeapeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee lerrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 llqqqllqeq amllhdprrp ppppdrskag lhepkaqhep adrarevedr frktnhsspe
      541 aqskqtgrvl eppvpsrses fssgdsesvh palqrpaepq vqwshlaslk nnvspvsrsh
      601 sfsdpsppkf ahhhlrsqdp cppsrsevls qssdskaevp dpaqkawsrs dsdevpprvp
      661 vrttsrspvl srrdsplqgs gqqnnqagqr nstssieprl lwerveklap rpgsgsssgs
      721 snsgsqpgsh pgsqsgsger frvrssskse gspsqrlena akkpedkkev frplkpadlt
      781 llakelrave dvrpphkvtd ysssseesgt tdeedddveq egaeeptsgp edtraassln
      841 lsngetesvk tmvvhddves epaltpskeg tlivrqtqsa sntlqkhkss ssftpfidpr
      901 llqispssgt tvtsvvgfsc dgmrpeamrq dptrkgsvvn vnptntrpqs dtpeirkykk
      961 rfnseilcaa lwgvnllvgt esglmlldrs gqgkvyplin rrrfqqmdvl eglnvlvtis
     1021 gkkdklrvyy lswlrnkilh ndpevekkqg wttvgdlegc vhykvvkyer ikflvialks
     1081 svevyawapk pyhkfmafks fgelvhkpll vdltveegqr lkviygscag fhavdvdsgs
     1141 vydiylpthi qcsikphaii ilpntdgmel lvcyedegvy vntygritkd vvlqwgempt
     1201 svayirsnqt mgwgekaiei rsvetghldg vfmhkraqrl kflcerndkv ffasvrsggs
     1261 sqvyfmtlgr tsllsw
//
LOCUS       XP_061011873            1262 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X17
            [Dama dama].
ACCESSION   XP_061011873
VERSION     XP_061011873.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155890.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1262
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1262
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X17"
                     /calculated_mol_wt=143438
     Region          8..289
                     /region_name="STKc_MAP4K4_6_N"
                     /note="N-terminal Catalytic domain of the Serine/Threonine
                     Kinases, Mitogen-Activated Protein Kinase Kinase Kinase
                     Kinase 4 and 6; cd06636"
                     /db_xref="CDD:270806"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,153,
                     155..158,160,170..171,174,188..191,193,225,234)
                     /site_type="active"
                     /db_xref="CDD:270806"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,157..158,
                     160,171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270806"
     Site            order(34..35,153,155..157,174,188..191,193,225,234)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270806"
     Site            170..193
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270806"
     Region          944..1242
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1262
                     /gene="MAP4K4"
                     /coded_by="XM_061155890.1:102..3890"
                     /db_xref="GeneID:133065140"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhihhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eeapeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee lerrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 llqqqllqeq amllhdprrp ppppdrskag lhepkaqhep adrarevedr frktnhsspe
      541 aqskqtgrvl eppvpsrses fssgdsesvh palqrpaepq vpvrttsrsp vlsrrdsplq
      601 gsgqqnnqag qrnstssiep rllwervekl aprpgsgsss gssnsgsqpg shpgsqsgsg
      661 erfrvrsssk segspsqrle naakkpedkk evfrplkpad ltllakelra vedvrpphkv
      721 tdyssssees gttdeedddv eqegaeepts gpedtraass lnlsngetes vktmvvhddv
      781 esepaltpsk egtlivrqsa vdqkrashhe sngfagrihl lpdllqqshs sstsstsssp
      841 sssqptptms pqtpqdkltt netqsasntl qkhkssssft pfidprllqi spssgttvts
      901 vvgfscdgmr peamrqdptr kgsvvnvnpt ntrpqsdtpe irkykkrfns eilcaalwgv
      961 nllvgtesgl mlldrsgqgk vyplinrrrf qqmdvlegln vlvtisgkkd klrvyylswl
     1021 rnkilhndpe vekkqgwttv gdlegcvhyk vvkyerikfl vialkssvev yawapkpyhk
     1081 fmafksfgel vhkpllvdlt veegqrlkvi ygscagfhav dvdsgsvydi ylpthiqcsi
     1141 kphaiiilpn tdgmellvcy edegvyvnty gritkdvvlq wgemptsvay irsnqtmgwg
     1201 ekaieirsve tghldgvfmh kraqrlkflc erndkvffas vrsggssqvy fmtlgrtsll
     1261 sw
//
LOCUS       XP_061011874            1239 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X18
            [Dama dama].
ACCESSION   XP_061011874
VERSION     XP_061011874.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155891.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1239
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1239
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X18"
                     /calculated_mol_wt=141448
     Region          8..289
                     /region_name="STKc_MAP4K4_6_N"
                     /note="N-terminal Catalytic domain of the Serine/Threonine
                     Kinases, Mitogen-Activated Protein Kinase Kinase Kinase
                     Kinase 4 and 6; cd06636"
                     /db_xref="CDD:270806"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,153,
                     155..158,160,170..171,174,188..191,193,225,234)
                     /site_type="active"
                     /db_xref="CDD:270806"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,157..158,
                     160,171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270806"
     Site            order(34..35,153,155..157,174,188..191,193,225,234)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270806"
     Site            170..193
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270806"
     Region          921..1219
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1239
                     /gene="MAP4K4"
                     /coded_by="XM_061155891.1:102..3821"
                     /db_xref="GeneID:133065140"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhihhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eeapeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee lerrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 llqqqllqeq amllecrwre leehrqaerl qrqlqqeqay llslqhdprr pppppdrska
      541 glhepkaqhe padrarevpv rttsrspvls rrdsplqgsg qqnnqagqrn stssieprll
      601 werveklapr pgsgsssgss nsgsqpgshp gsqsgsgerf rvrssskseg spsqrlenaa
      661 kkpedkkevf rplkpadltl lakelraved vrpphkvtdy sssseesgtt deedddveqe
      721 gaeeptsgpe dtraasslnl sngetesvkt mvvhddvese paltpskegt livrqsavdq
      781 krashhesng fagrihllpd llqqshssst sstssspsss qptptmspqt pqdklttnet
      841 qsasntlqkh kssssftpfi dprllqisps sgttvtsvvg fscdgmrpea mrqdptrkgs
      901 vvnvnptntr pqsdtpeirk ykkrfnseil caalwgvnll vgtesglmll drsgqgkvyp
      961 linrrrfqqm dvleglnvlv tisgkkdklr vyylswlrnk ilhndpevek kqgwttvgdl
     1021 egcvhykvvk yerikflvia lkssvevyaw apkpyhkfma fksfgelvhk pllvdltvee
     1081 gqrlkviygs cagfhavdvd sgsvydiylp thiqcsikph aiiilpntdg mellvcyede
     1141 gvyvntygri tkdvvlqwge mptsvayirs nqtmgwgeka ieirsvetgh ldgvfmhkra
     1201 qrlkflcern dkvffasvrs ggssqvyfmt lgrtsllsw
//
LOCUS       XP_061011875            1238 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X19
            [Dama dama].
ACCESSION   XP_061011875
VERSION     XP_061011875.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155892.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1238
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1238
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X19"
                     /calculated_mol_wt=141361
     Region          8..289
                     /region_name="STKc_MAP4K4_6_N"
                     /note="N-terminal Catalytic domain of the Serine/Threonine
                     Kinases, Mitogen-Activated Protein Kinase Kinase Kinase
                     Kinase 4 and 6; cd06636"
                     /db_xref="CDD:270806"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,153,
                     155..158,160,170..171,174,188..191,193,225,234)
                     /site_type="active"
                     /db_xref="CDD:270806"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,157..158,
                     160,171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270806"
     Site            order(34..35,153,155..157,174,188..191,193,225,234)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270806"
     Site            170..193
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270806"
     Region          920..1218
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1238
                     /gene="MAP4K4"
                     /coded_by="XM_061155892.1:102..3818"
                     /db_xref="GeneID:133065140"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhihhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eeapeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee lerrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 llqqqllqeq amllecrwre leehrqaerl qrqlqqeqay llslqhdprr pppppdrska
      541 glhepkaqhe padrarevpv rttsrspvls rrdsplqgsg qqnnqagqrn stsieprllw
      601 erveklaprp gsgsssgssn sgsqpgshpg sqsgsgerfr vrsssksegs psqrlenaak
      661 kpedkkevfr plkpadltll akelravedv rpphkvtdys ssseesgttd eedddveqeg
      721 aeeptsgped traasslnls ngetesvktm vvhddvesep altpskegtl ivrqsavdqk
      781 rashhesngf agrihllpdl lqqshsssts stssspsssq ptptmspqtp qdklttnetq
      841 sasntlqkhk ssssftpfid prllqispss gttvtsvvgf scdgmrpeam rqdptrkgsv
      901 vnvnptntrp qsdtpeirky kkrfnseilc aalwgvnllv gtesglmlld rsgqgkvypl
      961 inrrrfqqmd vleglnvlvt isgkkdklrv yylswlrnki lhndpevekk qgwttvgdle
     1021 gcvhykvvky erikflvial kssvevyawa pkpyhkfmaf ksfgelvhkp llvdltveeg
     1081 qrlkviygsc agfhavdvds gsvydiylpt hiqcsikpha iiilpntdgm ellvcyedeg
     1141 vyvntygrit kdvvlqwgem ptsvayirsn qtmgwgekai eirsvetghl dgvfmhkraq
     1201 rlkflcernd kvffasvrsg gssqvyfmtl grtsllsw
//
LOCUS       XP_061011876            1228 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X20
            [Dama dama].
ACCESSION   XP_061011876
VERSION     XP_061011876.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155893.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1228
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1228
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X20"
                     /calculated_mol_wt=140516
     Region          8..289
                     /region_name="STKc_MAP4K4_6_N"
                     /note="N-terminal Catalytic domain of the Serine/Threonine
                     Kinases, Mitogen-Activated Protein Kinase Kinase Kinase
                     Kinase 4 and 6; cd06636"
                     /db_xref="CDD:270806"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,153,
                     155..158,160,170..171,174,188..191,193,225,234)
                     /site_type="active"
                     /db_xref="CDD:270806"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,157..158,
                     160,171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270806"
     Site            order(34..35,153,155..157,174,188..191,193,225,234)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270806"
     Site            170..193
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270806"
     Region          910..1208
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1228
                     /gene="MAP4K4"
                     /coded_by="XM_061155893.1:103..3789"
                     /db_xref="GeneID:133065140"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhihhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eeapeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee lerrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 llqqqllqeq amllecrwre leehrqaerl qrqlqqeqay llslqhdprr pppppdrska
      541 glhepkaqhe padrareved rfrktnhssp eaqskqtgrv leppvpsrse sfssgdsesv
      601 hpalqrpaep qvpvrttsrs pvlsrrdspl qgsgqqnnqa gqrnstsiep rllwervekl
      661 aprpgsgsss gssnsgsqpg shpgsqsgsg erfrvrsssk segspsqrle naakkpedkk
      721 evfrplkpad ltllakelra vedvrpphkv tdyssssees gttdeedddv eqegaeepts
      781 gpedtraass lnlsngetes vktmvvhddv esepaltpsk egtlivrqtq sasntlqkhk
      841 ssssftpfid prllqispss gttvtsvvgf scdgmrpeam rqdptrkgsv vnvnptntrp
      901 qsdtpeirky kkrfnseilc aalwgvnllv gtesglmlld rsgqgkvypl inrrrfqqmd
      961 vleglnvlvt isgkkdklrv yylswlrnki lhndpevekk qgwttvgdle gcvhykvvky
     1021 erikflvial kssvevyawa pkpyhkfmaf ksfgelvhkp llvdltveeg qrlkviygsc
     1081 agfhavdvds gsvydiylpt hiqcsikpha iiilpntdgm ellvcyedeg vyvntygrit
     1141 kdvvlqwgem ptsvayirsn qtmgwgekai eirsvetghl dgvfmhkraq rlkflcernd
     1201 kvffasvrsg gssqvyfmtl grtsllsw
//
LOCUS       XP_061011877            1222 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X21
            [Dama dama].
ACCESSION   XP_061011877
VERSION     XP_061011877.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155894.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1222
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1222
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X21"
                     /calculated_mol_wt=139318
     Region          8..289
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(31..34,37,39,52,54,83,105..108,153,157..158,160,
                     170..171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          904..1202
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1222
                     /gene="MAP4K4"
                     /coded_by="XM_061155894.1:102..3770"
                     /db_xref="GeneID:133065140"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhihhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eeapeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee lerrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 llqqqllqeq amllhdprrp ppppdrskag lhepkaqhep adrarevqws hlaslknnvs
      541 pvsrshsfsd psppkfahhh lrsqdpcpps rsevlsqssd skaevpdpaq kawsrsdsde
      601 vpprvpvrtt srspvlsrrd splqgsgqqn nqagqrnsts sieprllwer veklaprpgs
      661 gsssgssnsg sqpgshpgsq sgsgerfrvr sssksegsps qrlenaakkp edkkevfrpl
      721 kpadltllak elravedvrp phkvtdysss seesgttdee dddveqegae eptsgpedtr
      781 aasslnlsng etesvktmvv hddvesepal tpskegtliv rqtqsasntl qkhkssssft
      841 pfidprllqi spssgttvts vvgfscdgmr peamrqdptr kgsvvnvnpt ntrpqsdtpe
      901 irkykkrfns eilcaalwgv nllvgtesgl mlldrsgqgk vyplinrrrf qqmdvlegln
      961 vlvtisgkkd klrvyylswl rnkilhndpe vekkqgwttv gdlegcvhyk vvkyerikfl
     1021 vialkssvev yawapkpyhk fmafksfgel vhkpllvdlt veegqrlkvi ygscagfhav
     1081 dvdsgsvydi ylpthiqcsi kphaiiilpn tdgmellvcy edegvyvnty gritkdvvlq
     1141 wgemptsvay irsnqtmgwg ekaieirsve tghldgvfmh kraqrlkflc erndkvffas
     1201 vrsggssqvy fmtlgrtsll sw
//
LOCUS       XP_061011878            1208 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X22
            [Dama dama].
ACCESSION   XP_061011878
VERSION     XP_061011878.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155895.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1208
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1208
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X22"
                     /calculated_mol_wt=137497
     Region          8..289
                     /region_name="STKc_MAP4K4_6_N"
                     /note="N-terminal Catalytic domain of the Serine/Threonine
                     Kinases, Mitogen-Activated Protein Kinase Kinase Kinase
                     Kinase 4 and 6; cd06636"
                     /db_xref="CDD:270806"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,153,
                     155..158,160,170..171,174,188..191,193,225,234)
                     /site_type="active"
                     /db_xref="CDD:270806"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,157..158,
                     160,171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270806"
     Site            order(34..35,153,155..157,174,188..191,193,225,234)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270806"
     Site            170..193
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270806"
     Region          890..1188
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1208
                     /gene="MAP4K4"
                     /coded_by="XM_061155895.1:102..3728"
                     /db_xref="GeneID:133065140"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhihhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eeapeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee lerrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 llqqqllqeq amllhdprrp ppppdrskag lhepkaqhep adrarevpvr ttsrspvlsr
      541 rdsplqgsgq qnnqagqrns tssieprllw erveklaprp gsgsssgssn sgsqpgshpg
      601 sqsgsgerfr vrsssksegs psqrlenaak kpedkkevfr plkpadltll akelravedv
      661 rpphkvtdys ssseesgttd eedddveqeg aeeptsgped traasslnls ngetesvktm
      721 vvhddvesep altpskegtl ivrqsavdqk rashhesngf agrihllpdl lqqshsssts
      781 stssspsssq ptptmspqtp qdklttnetq sasntlqkhk ssssftpfid prllqispss
      841 gttvtsvvgf scdgmrpeam rqdptrkgsv vnvnptntrp qsdtpeirky kkrfnseilc
      901 aalwgvnllv gtesglmlld rsgqgkvypl inrrrfqqmd vleglnvlvt isgkkdklrv
      961 yylswlrnki lhndpevekk qgwttvgdle gcvhykvvky erikflvial kssvevyawa
     1021 pkpyhkfmaf ksfgelvhkp llvdltveeg qrlkviygsc agfhavdvds gsvydiylpt
     1081 hiqcsikpha iiilpntdgm ellvcyedeg vyvntygrit kdvvlqwgem ptsvayirsn
     1141 qtmgwgekai eirsvetghl dgvfmhkraq rlkflcernd kvffasvrsg gssqvyfmtl
     1201 grtsllsw
//
LOCUS       XP_061011879            1207 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X23
            [Dama dama].
ACCESSION   XP_061011879
VERSION     XP_061011879.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155896.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1207
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1207
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X23"
                     /calculated_mol_wt=137410
     Region          8..289
                     /region_name="STKc_MAP4K4_6_N"
                     /note="N-terminal Catalytic domain of the Serine/Threonine
                     Kinases, Mitogen-Activated Protein Kinase Kinase Kinase
                     Kinase 4 and 6; cd06636"
                     /db_xref="CDD:270806"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,153,
                     155..158,160,170..171,174,188..191,193,225,234)
                     /site_type="active"
                     /db_xref="CDD:270806"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,157..158,
                     160,171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270806"
     Site            order(34..35,153,155..157,174,188..191,193,225,234)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270806"
     Site            170..193
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270806"
     Region          889..1187
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1207
                     /gene="MAP4K4"
                     /coded_by="XM_061155896.1:102..3725"
                     /db_xref="GeneID:133065140"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhihhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eeapeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee lerrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 llqqqllqeq amllhdprrp ppppdrskag lhepkaqhep adrarevpvr ttsrspvlsr
      541 rdsplqgsgq qnnqagqrns tsieprllwe rveklaprpg sgsssgssns gsqpgshpgs
      601 qsgsgerfrv rsssksegsp sqrlenaakk pedkkevfrp lkpadltlla kelravedvr
      661 pphkvtdyss sseesgttde edddveqega eeptsgpedt raasslnlsn getesvktmv
      721 vhddvesepa ltpskegtli vrqsavdqkr ashhesngfa grihllpdll qqshssstss
      781 tssspsssqp tptmspqtpq dklttnetqs asntlqkhks sssftpfidp rllqispssg
      841 ttvtsvvgfs cdgmrpeamr qdptrkgsvv nvnptntrpq sdtpeirkyk krfnseilca
      901 alwgvnllvg tesglmlldr sgqgkvypli nrrrfqqmdv leglnvlvti sgkkdklrvy
      961 ylswlrnkil hndpevekkq gwttvgdleg cvhykvvkye rikflvialk ssvevyawap
     1021 kpyhkfmafk sfgelvhkpl lvdltveegq rlkviygsca gfhavdvdsg svydiylpth
     1081 iqcsikphai iilpntdgme llvcyedegv yvntygritk dvvlqwgemp tsvayirsnq
     1141 tmgwgekaie irsvetghld gvfmhkraqr lkflcerndk vffasvrsgg ssqvyfmtlg
     1201 rtsllsw
//
LOCUS       XP_061011880            1198 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X24
            [Dama dama].
ACCESSION   XP_061011880
VERSION     XP_061011880.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155897.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1198
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1198
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X24"
                     /calculated_mol_wt=136652
     Region          8..289
                     /region_name="STKc_MAP4K4_6_N"
                     /note="N-terminal Catalytic domain of the Serine/Threonine
                     Kinases, Mitogen-Activated Protein Kinase Kinase Kinase
                     Kinase 4 and 6; cd06636"
                     /db_xref="CDD:270806"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,153,
                     155..158,160,170..171,174,188..191,193,225,234)
                     /site_type="active"
                     /db_xref="CDD:270806"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,157..158,
                     160,171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270806"
     Site            order(34..35,153,155..157,174,188..191,193,225,234)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270806"
     Site            170..193
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270806"
     Region          880..1178
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1198
                     /gene="MAP4K4"
                     /coded_by="XM_061155897.1:102..3698"
                     /db_xref="GeneID:133065140"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhihhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eeapeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee lerrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 llqqqllqeq amllhdprrp ppppdrskag lhepkaqhep adrarevedr frktnhsspe
      541 aqskqtgrvl eppvpsrses fssgdsesvh palqrpaepq vpvrttsrsp vlsrrdsplq
      601 gsgqqnnqag qrnstssiep rllwervekl aprpgsgsss gssnsgsqpg shpgsqsgsg
      661 erfrvrsssk segspsqrle naakkpedkk evfrplkpad ltllakelra vedvrpphkv
      721 tdyssssees gttdeedddv eqegaeepts gpedtraass lnlsngetes vktmvvhddv
      781 esepaltpsk egtlivrqtq sasntlqkhk ssssftpfid prllqispss gttvtsvvgf
      841 scdgmrpeam rqdptrkgsv vnvnptntrp qsdtpeirky kkrfnseilc aalwgvnllv
      901 gtesglmlld rsgqgkvypl inrrrfqqmd vleglnvlvt isgkkdklrv yylswlrnki
      961 lhndpevekk qgwttvgdle gcvhykvvky erikflvial kssvevyawa pkpyhkfmaf
     1021 ksfgelvhkp llvdltveeg qrlkviygsc agfhavdvds gsvydiylpt hiqcsikpha
     1081 iiilpntdgm ellvcyedeg vyvntygrit kdvvlqwgem ptsvayirsn qtmgwgekai
     1141 eirsvetghl dgvfmhkraq rlkflcernd kvffasvrsg gssqvyfmtl grtsllsw
//
LOCUS       XP_061011881            1175 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X25
            [Dama dama].
ACCESSION   XP_061011881
VERSION     XP_061011881.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155898.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1175
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1175
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X25"
                     /calculated_mol_wt=134662
     Region          8..289
                     /region_name="STKc_MAP4K4_6_N"
                     /note="N-terminal Catalytic domain of the Serine/Threonine
                     Kinases, Mitogen-Activated Protein Kinase Kinase Kinase
                     Kinase 4 and 6; cd06636"
                     /db_xref="CDD:270806"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,153,
                     155..158,160,170..171,174,188..191,193,225,234)
                     /site_type="active"
                     /db_xref="CDD:270806"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,157..158,
                     160,171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270806"
     Site            order(34..35,153,155..157,174,188..191,193,225,234)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270806"
     Site            170..193
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270806"
     Region          857..1155
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1175
                     /gene="MAP4K4"
                     /coded_by="XM_061155898.1:102..3629"
                     /db_xref="GeneID:133065140"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhihhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eeapeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee lerrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 llqqqllqeq amllecrwre leehrqaerl qrqlqqeqay llslqhdprr pppppdrska
      541 glhepkaqhe padrarevpv rttsrspvls rrdsplqgsg qqnnqagqrn stssieprll
      601 werveklapr pgsgsssgss nsgsqpgshp gsqsgsgerf rvrssskseg spsqrlenaa
      661 kkpedkkevf rplkpadltl lakelraved vrpphkvtdy sssseesgtt deedddveqe
      721 gaeeptsgpe dtraasslnl sngetesvkt mvvhddvese paltpskegt livrqtqsas
      781 ntlqkhksss sftpfidprl lqispssgtt vtsvvgfscd gmrpeamrqd ptrkgsvvnv
      841 nptntrpqsd tpeirkykkr fnseilcaal wgvnllvgte sglmlldrsg qgkvyplinr
      901 rrfqqmdvle glnvlvtisg kkdklrvyyl swlrnkilhn dpevekkqgw ttvgdlegcv
      961 hykvvkyeri kflvialkss vevyawapkp yhkfmafksf gelvhkpllv dltveegqrl
     1021 kviygscagf havdvdsgsv ydiylpthiq csikphaiii lpntdgmell vcyedegvyv
     1081 ntygritkdv vlqwgempts vayirsnqtm gwgekaieir svetghldgv fmhkraqrlk
     1141 flcerndkvf fasvrsggss qvyfmtlgrt sllsw
//
LOCUS       XP_061011882            1144 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X26
            [Dama dama].
ACCESSION   XP_061011882
VERSION     XP_061011882.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155899.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1144
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1144
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X26"
                     /calculated_mol_wt=130712
     Region          8..289
                     /region_name="STKc_MAP4K4_6_N"
                     /note="N-terminal Catalytic domain of the Serine/Threonine
                     Kinases, Mitogen-Activated Protein Kinase Kinase Kinase
                     Kinase 4 and 6; cd06636"
                     /db_xref="CDD:270806"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,153,
                     155..158,160,170..171,174,188..191,193,225,234)
                     /site_type="active"
                     /db_xref="CDD:270806"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,157..158,
                     160,171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270806"
     Site            order(34..35,153,155..157,174,188..191,193,225,234)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270806"
     Site            170..193
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270806"
     Region          826..1124
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1144
                     /gene="MAP4K4"
                     /coded_by="XM_061155899.1:102..3536"
                     /db_xref="GeneID:133065140"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhihhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eeapeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee lerrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 llqqqllqeq amllhdprrp ppppdrskag lhepkaqhep adrarevpvr ttsrspvlsr
      541 rdsplqgsgq qnnqagqrns tssieprllw erveklaprp gsgsssgssn sgsqpgshpg
      601 sqsgsgerfr vrsssksegs psqrlenaak kpedkkevfr plkpadltll akelravedv
      661 rpphkvtdys ssseesgttd eedddveqeg aeeptsgped traasslnls ngetesvktm
      721 vvhddvesep altpskegtl ivrqtqsasn tlqkhkssss ftpfidprll qispssgttv
      781 tsvvgfscdg mrpeamrqdp trkgsvvnvn ptntrpqsdt peirkykkrf nseilcaalw
      841 gvnllvgtes glmlldrsgq gkvyplinrr rfqqmdvleg lnvlvtisgk kdklrvyyls
      901 wlrnkilhnd pevekkqgwt tvgdlegcvh ykvvkyerik flvialkssv evyawapkpy
      961 hkfmafksfg elvhkpllvd ltveegqrlk viygscagfh avdvdsgsvy diylpthiqc
     1021 sikphaiiil pntdgmellv cyedegvyvn tygritkdvv lqwgemptsv ayirsnqtmg
     1081 wgekaieirs vetghldgvf mhkraqrlkf lcerndkvff asvrsggssq vyfmtlgrts
     1141 llsw
//
LOCUS       XP_061011883            1253 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X27
            [Dama dama].
ACCESSION   XP_061011883
VERSION     XP_061011883.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155900.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1253
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1253
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X27"
                     /calculated_mol_wt=143269
     Region          8..289
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(31..34,37,39,52,54,83,105..108,153,157..158,160,
                     170..171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          935..1233
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1253
                     /gene="MAP4K4"
                     /coded_by="XM_061155900.1:102..3863"
                     /db_xref="GeneID:133065140"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhihhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eeapeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee lerrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 llqqqllqeq amllecrwre leehrqaerl qrqlqqeqay llslqhdprr pppppdrska
      541 glhepkaqhe padrarevqw shlaslknnv spvsrshsfs dpsppkfahh hlrsqdpcpp
      601 srsevlsqss dskaevpdpa qkawsrsdsd evpprvpvrt tsrspvlsrr dsplqgsgqq
      661 nnqagqrnst ssieprllwe rveklaprpg sgsssgssns gsqpgshpgs qsgsgerfrv
      721 rsssksegsp sqrlenaakk pedkkevfrp lkpadltlla kelravedvr pphkvtdyss
      781 sseesgttde edddveqega eeptsgpedt raasslnlsn getesvktmv vhddvesepa
      841 ltpskegtli vrqtqsasnt lqkhkssssf tpfidprllq ispssgttvt svvgfscdgm
      901 rpeamrqdpt rkgsvvnvnp tntrpqsdtp eirkykkrfn seilcaalwg vnllvgtesg
      961 lmlldrsgqg kvyplinrrr fqqmdvlegl nvlvtisgkk dklrvyylsw lrnkilhndp
     1021 evekkqgwtt vgdlegcvhy kvvkyerikf lvialkssve vyawapkpyh kfmafksfge
     1081 lvhkpllvdl tveegqrlkv iygscagfha vdvdsgsvyd iylpthiqcs ikphaiiilp
     1141 ntdgmellvc yedegvyvnt ygritkdvvl qwgemptsva yirsnqtmgw gekaieirsv
     1201 etghldgvfm hkraqrlkfl cerndkvffa svrsggssqv yfmtlgrtsl lsw
//
LOCUS       XP_061011884            1252 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X28
            [Dama dama].
ACCESSION   XP_061011884
VERSION     XP_061011884.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155901.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1252
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1252
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X28"
                     /calculated_mol_wt=143182
     Region          8..289
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(31..34,37,39,52,54,83,105..108,153,157..158,160,
                     170..171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          934..1232
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1252
                     /gene="MAP4K4"
                     /coded_by="XM_061155901.1:103..3861"
                     /db_xref="GeneID:133065140"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhihhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eeapeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee lerrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 llqqqllqeq amllecrwre leehrqaerl qrqlqqeqay llslqhdprr pppppdrska
      541 glhepkaqhe padrarevqw shlaslknnv spvsrshsfs dpsppkfahh hlrsqdpcpp
      601 srsevlsqss dskaevpdpa qkawsrsdsd evpprvpvrt tsrspvlsrr dsplqgsgqq
      661 nnqagqrnst sieprllwer veklaprpgs gsssgssnsg sqpgshpgsq sgsgerfrvr
      721 sssksegsps qrlenaakkp edkkevfrpl kpadltllak elravedvrp phkvtdysss
      781 seesgttdee dddveqegae eptsgpedtr aasslnlsng etesvktmvv hddvesepal
      841 tpskegtliv rqtqsasntl qkhkssssft pfidprllqi spssgttvts vvgfscdgmr
      901 peamrqdptr kgsvvnvnpt ntrpqsdtpe irkykkrfns eilcaalwgv nllvgtesgl
      961 mlldrsgqgk vyplinrrrf qqmdvlegln vlvtisgkkd klrvyylswl rnkilhndpe
     1021 vekkqgwttv gdlegcvhyk vvkyerikfl vialkssvev yawapkpyhk fmafksfgel
     1081 vhkpllvdlt veegqrlkvi ygscagfhav dvdsgsvydi ylpthiqcsi kphaiiilpn
     1141 tdgmellvcy edegvyvnty gritkdvvlq wgemptsvay irsnqtmgwg ekaieirsve
     1201 tghldgvfmh kraqrlkflc erndkvffas vrsggssqvy fmtlgrtsll sw
//
LOCUS       XP_061011885            1251 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X29
            [Dama dama].
ACCESSION   XP_061011885
VERSION     XP_061011885.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155902.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1251
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1251
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X29"
                     /calculated_mol_wt=143042
     Region          8..289
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(31..34,37,39,52,54,83,105..108,153,157..158,160,
                     170..171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          933..1231
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1251
                     /gene="MAP4K4"
                     /coded_by="XM_061155902.1:102..3857"
                     /db_xref="GeneID:133065140"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhihhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eeapeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee lerrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 llqqqllqeq amllecrwre leehrqaerl qrqlqqeqay llslqhdprr pppppdrska
      541 glhepkaqhe padrarewsh laslknnvsp vsrshsfsdp sppkfahhhl rsqdpcppsr
      601 sevlsqssds kaevpdpaqk awsrsdsdev pprvpvrtts rspvlsrrds plqgsgqqnn
      661 qagqrnstss ieprllwerv eklaprpgsg sssgssnsgs qpgshpgsqs gsgerfrvrs
      721 ssksegspsq rlenaakkpe dkkevfrplk padltllake lravedvrpp hkvtdyssss
      781 eesgttdeed ddveqegaee ptsgpedtra asslnlsnge tesvktmvvh ddvesepalt
      841 pskegtlivr qtqsasntlq khkssssftp fidprllqis pssgttvtsv vgfscdgmrp
      901 eamrqdptrk gsvvnvnptn trpqsdtpei rkykkrfnse ilcaalwgvn llvgtesglm
      961 lldrsgqgkv yplinrrrfq qmdvleglnv lvtisgkkdk lrvyylswlr nkilhndpev
     1021 ekkqgwttvg dlegcvhykv vkyerikflv ialkssvevy awapkpyhkf mafksfgelv
     1081 hkpllvdltv eegqrlkviy gscagfhavd vdsgsvydiy lpthiqcsik phaiiilpnt
     1141 dgmellvcye degvyvntyg ritkdvvlqw gemptsvayi rsnqtmgwge kaieirsvet
     1201 ghldgvfmhk raqrlkflce rndkvffasv rsggssqvyf mtlgrtslls w
//
LOCUS       XP_061011886            1250 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X30
            [Dama dama].
ACCESSION   XP_061011886
VERSION     XP_061011886.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155903.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1250
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1250
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X30"
                     /calculated_mol_wt=142954
     Region          8..289
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(31..34,37,39,52,54,83,105..108,153,157..158,160,
                     170..171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          932..1230
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1250
                     /gene="MAP4K4"
                     /coded_by="XM_061155903.1:103..3855"
                     /db_xref="GeneID:133065140"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhihhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eeapeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee lerrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 llqqqllqeq amllecrwre leehrqaerl qrqlqqeqay llslqhdprr pppppdrska
      541 glhepkaqhe padrarewsh laslknnvsp vsrshsfsdp sppkfahhhl rsqdpcppsr
      601 sevlsqssds kaevpdpaqk awsrsdsdev pprvpvrtts rspvlsrrds plqgsgqqnn
      661 qagqrnstsi eprllwerve klaprpgsgs ssgssnsgsq pgshpgsqsg sgerfrvrss
      721 sksegspsqr lenaakkped kkevfrplkp adltllakel ravedvrpph kvtdysssse
      781 esgttdeedd dveqegaeep tsgpedtraa sslnlsnget esvktmvvhd dvesepaltp
      841 skegtlivrq tqsasntlqk hkssssftpf idprllqisp ssgttvtsvv gfscdgmrpe
      901 amrqdptrkg svvnvnptnt rpqsdtpeir kykkrfnsei lcaalwgvnl lvgtesglml
      961 ldrsgqgkvy plinrrrfqq mdvleglnvl vtisgkkdkl rvyylswlrn kilhndpeve
     1021 kkqgwttvgd legcvhykvv kyerikflvi alkssvevya wapkpyhkfm afksfgelvh
     1081 kpllvdltve egqrlkviyg scagfhavdv dsgsvydiyl pthiqcsikp haiiilpntd
     1141 gmellvcyed egvyvntygr itkdvvlqwg emptsvayir snqtmgwgek aieirsvetg
     1201 hldgvfmhkr aqrlkflcer ndkvffasvr sggssqvyfm tlgrtsllsw
//
LOCUS       XP_061011887            1229 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X31
            [Dama dama].
ACCESSION   XP_061011887
VERSION     XP_061011887.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155904.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1229
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1229
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X31"
                     /calculated_mol_wt=140603
     Region          8..289
                     /region_name="STKc_MAP4K4_6_N"
                     /note="N-terminal Catalytic domain of the Serine/Threonine
                     Kinases, Mitogen-Activated Protein Kinase Kinase Kinase
                     Kinase 4 and 6; cd06636"
                     /db_xref="CDD:270806"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,153,
                     155..158,160,170..171,174,188..191,193,225,234)
                     /site_type="active"
                     /db_xref="CDD:270806"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,157..158,
                     160,171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270806"
     Site            order(34..35,153,155..157,174,188..191,193,225,234)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270806"
     Site            170..193
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270806"
     Region          911..1209
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1229
                     /gene="MAP4K4"
                     /coded_by="XM_061155904.1:102..3791"
                     /db_xref="GeneID:133065140"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhihhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eeapeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee lerrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 llqqqllqeq amllecrwre leehrqaerl qrqlqqeqay llslqhdprr pppppdrska
      541 glhepkaqhe padrareved rfrktnhssp eaqskqtgrv leppvpsrse sfssgdsesv
      601 hpalqrpaep qvpvrttsrs pvlsrrdspl qgsgqqnnqa gqrnstssie prllwervek
      661 laprpgsgss sgssnsgsqp gshpgsqsgs gerfrvrsss ksegspsqrl enaakkpedk
      721 kevfrplkpa dltllakelr avedvrpphk vtdyssssee sgttdeeddd veqegaeept
      781 sgpedtraas slnlsngete svktmvvhdd vesepaltps kegtlivrqt qsasntlqkh
      841 kssssftpfi dprllqisps sgttvtsvvg fscdgmrpea mrqdptrkgs vvnvnptntr
      901 pqsdtpeirk ykkrfnseil caalwgvnll vgtesglmll drsgqgkvyp linrrrfqqm
      961 dvleglnvlv tisgkkdklr vyylswlrnk ilhndpevek kqgwttvgdl egcvhykvvk
     1021 yerikflvia lkssvevyaw apkpyhkfma fksfgelvhk pllvdltvee gqrlkviygs
     1081 cagfhavdvd sgsvydiylp thiqcsikph aiiilpntdg mellvcyede gvyvntygri
     1141 tkdvvlqwge mptsvayirs nqtmgwgeka ieirsvetgh ldgvfmhkra qrlkflcern
     1201 dkvffasvrs ggssqvyfmt lgrtsllsw
//
LOCUS       XP_061011888            1221 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X32
            [Dama dama].
ACCESSION   XP_061011888
VERSION     XP_061011888.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155905.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1221
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1221
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X32"
                     /calculated_mol_wt=139231
     Region          8..289
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(31..34,37,39,52,54,83,105..108,153,157..158,160,
                     170..171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          903..1201
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1221
                     /gene="MAP4K4"
                     /coded_by="XM_061155905.1:103..3768"
                     /db_xref="GeneID:133065140"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhihhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eeapeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee lerrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 llqqqllqeq amllhdprrp ppppdrskag lhepkaqhep adrarevqws hlaslknnvs
      541 pvsrshsfsd psppkfahhh lrsqdpcpps rsevlsqssd skaevpdpaq kawsrsdsde
      601 vpprvpvrtt srspvlsrrd splqgsgqqn nqagqrnsts ieprllwerv eklaprpgsg
      661 sssgssnsgs qpgshpgsqs gsgerfrvrs ssksegspsq rlenaakkpe dkkevfrplk
      721 padltllake lravedvrpp hkvtdyssss eesgttdeed ddveqegaee ptsgpedtra
      781 asslnlsnge tesvktmvvh ddvesepalt pskegtlivr qtqsasntlq khkssssftp
      841 fidprllqis pssgttvtsv vgfscdgmrp eamrqdptrk gsvvnvnptn trpqsdtpei
      901 rkykkrfnse ilcaalwgvn llvgtesglm lldrsgqgkv yplinrrrfq qmdvleglnv
      961 lvtisgkkdk lrvyylswlr nkilhndpev ekkqgwttvg dlegcvhykv vkyerikflv
     1021 ialkssvevy awapkpyhkf mafksfgelv hkpllvdltv eegqrlkviy gscagfhavd
     1081 vdsgsvydiy lpthiqcsik phaiiilpnt dgmellvcye degvyvntyg ritkdvvlqw
     1141 gemptsvayi rsnqtmgwge kaieirsvet ghldgvfmhk raqrlkflce rndkvffasv
     1201 rsggssqvyf mtlgrtslls w
//
LOCUS       XP_061011889            1174 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X33
            [Dama dama].
ACCESSION   XP_061011889
VERSION     XP_061011889.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155906.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1174
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1174
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X33"
                     /calculated_mol_wt=134575
     Region          8..289
                     /region_name="STKc_MAP4K4_6_N"
                     /note="N-terminal Catalytic domain of the Serine/Threonine
                     Kinases, Mitogen-Activated Protein Kinase Kinase Kinase
                     Kinase 4 and 6; cd06636"
                     /db_xref="CDD:270806"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,153,
                     155..158,160,170..171,174,188..191,193,225,234)
                     /site_type="active"
                     /db_xref="CDD:270806"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,157..158,
                     160,171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270806"
     Site            order(34..35,153,155..157,174,188..191,193,225,234)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270806"
     Site            170..193
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270806"
     Region          856..1154
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1174
                     /gene="MAP4K4"
                     /coded_by="XM_061155906.1:102..3626"
                     /db_xref="GeneID:133065140"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhihhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eeapeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee lerrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 llqqqllqeq amllecrwre leehrqaerl qrqlqqeqay llslqhdprr pppppdrska
      541 glhepkaqhe padrarevpv rttsrspvls rrdsplqgsg qqnnqagqrn stsieprllw
      601 erveklaprp gsgsssgssn sgsqpgshpg sqsgsgerfr vrsssksegs psqrlenaak
      661 kpedkkevfr plkpadltll akelravedv rpphkvtdys ssseesgttd eedddveqeg
      721 aeeptsgped traasslnls ngetesvktm vvhddvesep altpskegtl ivrqtqsasn
      781 tlqkhkssss ftpfidprll qispssgttv tsvvgfscdg mrpeamrqdp trkgsvvnvn
      841 ptntrpqsdt peirkykkrf nseilcaalw gvnllvgtes glmlldrsgq gkvyplinrr
      901 rfqqmdvleg lnvlvtisgk kdklrvyyls wlrnkilhnd pevekkqgwt tvgdlegcvh
      961 ykvvkyerik flvialkssv evyawapkpy hkfmafksfg elvhkpllvd ltveegqrlk
     1021 viygscagfh avdvdsgsvy diylpthiqc sikphaiiil pntdgmellv cyedegvyvn
     1081 tygritkdvv lqwgemptsv ayirsnqtmg wgekaieirs vetghldgvf mhkraqrlkf
     1141 lcerndkvff asvrsggssq vyfmtlgrts llsw
//
LOCUS       XP_061011890            1143 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X34
            [Dama dama].
ACCESSION   XP_061011890
VERSION     XP_061011890.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155907.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1143
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1143
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X34"
                     /calculated_mol_wt=130625
     Region          8..289
                     /region_name="STKc_MAP4K4_6_N"
                     /note="N-terminal Catalytic domain of the Serine/Threonine
                     Kinases, Mitogen-Activated Protein Kinase Kinase Kinase
                     Kinase 4 and 6; cd06636"
                     /db_xref="CDD:270806"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,153,
                     155..158,160,170..171,174,188..191,193,225,234)
                     /site_type="active"
                     /db_xref="CDD:270806"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,157..158,
                     160,171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270806"
     Site            order(34..35,153,155..157,174,188..191,193,225,234)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270806"
     Site            170..193
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270806"
     Region          825..1123
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1143
                     /gene="MAP4K4"
                     /coded_by="XM_061155907.1:102..3533"
                     /db_xref="GeneID:133065140"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhihhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eeapeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee lerrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 llqqqllqeq amllhdprrp ppppdrskag lhepkaqhep adrarevpvr ttsrspvlsr
      541 rdsplqgsgq qnnqagqrns tsieprllwe rveklaprpg sgsssgssns gsqpgshpgs
      601 qsgsgerfrv rsssksegsp sqrlenaakk pedkkevfrp lkpadltlla kelravedvr
      661 pphkvtdyss sseesgttde edddveqega eeptsgpedt raasslnlsn getesvktmv
      721 vhddvesepa ltpskegtli vrqtqsasnt lqkhkssssf tpfidprllq ispssgttvt
      781 svvgfscdgm rpeamrqdpt rkgsvvnvnp tntrpqsdtp eirkykkrfn seilcaalwg
      841 vnllvgtesg lmlldrsgqg kvyplinrrr fqqmdvlegl nvlvtisgkk dklrvyylsw
      901 lrnkilhndp evekkqgwtt vgdlegcvhy kvvkyerikf lvialkssve vyawapkpyh
      961 kfmafksfge lvhkpllvdl tveegqrlkv iygscagfha vdvdsgsvyd iylpthiqcs
     1021 ikphaiiilp ntdgmellvc yedegvyvnt ygritkdvvl qwgemptsva yirsnqtmgw
     1081 gekaieirsv etghldgvfm hkraqrlkfl cerndkvffa svrsggssqv yfmtlgrtsl
     1141 lsw
//
LOCUS       XP_061011891             511 aa            linear   MAM 02-DEC-2023
DEFINITION  CCR4-NOT transcription complex subunit 11 [Dama dama].
ACCESSION   XP_061011891
VERSION     XP_061011891.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155908.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..511
                     /product="CCR4-NOT transcription complex subunit 11"
                     /calculated_mol_wt=55118
     Region          372..495
                     /region_name="CNOT11"
                     /note="CCR4-NOT transcription complex subunit 11;
                     pfam10155"
                     /db_xref="CDD:401964"
     CDS             1..511
                     /gene="CNOT11"
                     /coded_by="XM_061155908.1:183..1718"
                     /db_xref="GeneID:133065145"
ORIGIN      
        1 mpgggasaas grlltaaeqr gareaagsas rsgpggsgss grggagvpgp gsggpggsag
       61 rmsltpkels sllsiiseea gggstfegls tafhhyfska dhfrlgsvlv mllqqpdllp
      121 saaqrltaly llwemyrtep laanpfaasf ahllnpappa rggqepdrpp lsgflppitp
      181 pekfflsqlm lapprelfkk tprqialmdv gnmgqsvdis glqlalaerq selptqskas
      241 fpsilsdpdp dssnsgfdss vasqitealv sgpkppiesh frpefirppp plhvcedela
      301 wlnptepdha iqwdksmcvk nstgveikri makafkspls spqqtqllge lekdpklvyh
      361 igltpaklpd lvennplvai emllklmqss qiteyfsvlv nmdmslhsme vvnrlttavd
      421 lppefihlyi sncistceqi kdkymqnrlv rlvcvflqsl irnkiinvqd lfievqafci
      481 efsrireaag lfrllktldt getpaetkms k
//
LOCUS       XP_061011892             393 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase RNF149 isoform X1 [Dama dama].
ACCESSION   XP_061011892
VERSION     XP_061011892.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155909.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..393
                     /product="E3 ubiquitin-protein ligase RNF149 isoform X1"
                     /calculated_mol_wt=42402
     Region          41..178
                     /region_name="PA_GRAIL_like"
                     /note="PA _GRAIL_like: Protease-associated (PA) domain
                     GRAIL-like. This group includes PA domain containing E3
                     (ubiquitin ligases) similar to human GRAIL (gene related
                     to anergy in lymphocytes) protein. Proteins in this group
                     contain a C3H2C3 RING finger. E3...; cd02122"
                     /db_xref="CDD:239037"
     Site            139..141
                     /site_type="other"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]"
                     /db_xref="CDD:239037"
     Region          261..308
                     /region_name="RING-H2_RNF149"
                     /note="RING finger, H2 subclass, found in RING finger
                     protein 149 (RNF149) and similar proteins; cd16804"
                     /db_xref="CDD:438455"
     CDS             1..393
                     /gene="RNF149"
                     /coded_by="XM_061155909.1:114..1295"
                     /db_xref="GeneID:133065146"
ORIGIN      
        1 mawrrrpear galallalal capgargrah ewfsavvste yvdprtnrsv rsvsesgrfg
       61 dsspkegarg lvgvpraedr dpegceastr flvpggrgaa pwvalvargg ctfkekvlaa
      121 arrnasavvl yneqrqgnlt apmshagtgn ivvimvsypk greivelvqk dipvtvtigv
      181 gtrhvqeyis gqsvvfvaia fitmmiisla wlifyyiqrf lytgsqfgsq shrketkkvi
      241 gqlplhtvkh gekgidvdae scavcienfk grdvirilpc khifhricid pwlldhrtcp
      301 mckldvikal gywgeledaq eatapesppg gvsaadlslm vadgersdag sselpstsdp
      361 vppcdasfke dagentalle tgrsdaqrdg ptc
//
LOCUS       XP_061011893             391 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase RNF149 isoform X2 [Dama dama].
ACCESSION   XP_061011893
VERSION     XP_061011893.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155910.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..391
                     /product="E3 ubiquitin-protein ligase RNF149 isoform X2"
                     /calculated_mol_wt=42243
     Region          41..176
                     /region_name="PA_GRAIL_like"
                     /note="PA _GRAIL_like: Protease-associated (PA) domain
                     GRAIL-like. This group includes PA domain containing E3
                     (ubiquitin ligases) similar to human GRAIL (gene related
                     to anergy in lymphocytes) protein. Proteins in this group
                     contain a C3H2C3 RING finger. E3...; cd02122"
                     /db_xref="CDD:239037"
     Site            139..141
                     /site_type="other"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]"
                     /db_xref="CDD:239037"
     Region          259..306
                     /region_name="RING-H2_RNF149"
                     /note="RING finger, H2 subclass, found in RING finger
                     protein 149 (RNF149) and similar proteins; cd16804"
                     /db_xref="CDD:438455"
     CDS             1..391
                     /gene="RNF149"
                     /coded_by="XM_061155910.1:115..1290"
                     /db_xref="GeneID:133065146"
ORIGIN      
        1 mawrrrpear galallalal capgargrah ewfsavvste yvdprtnrsv rsvsesgrfg
       61 dsspkegarg lvgvpraedr dpegceastr flvpggrgaa pwvalvargg ctfkekvlaa
      121 arrnasavvl yneqrqgnlt apmshagniv vimvsypkgr eivelvqkdi pvtvtigvgt
      181 rhvqeyisgq svvfvaiafi tmmiislawl ifyyiqrfly tgsqfgsqsh rketkkvigq
      241 lplhtvkhge kgidvdaesc avcienfkgr dvirilpckh ifhricidpw lldhrtcpmc
      301 kldvikalgy wgeledaqea tapesppggv saadlslmva dgersdagss elpstsdpvp
      361 pcdasfkeda gentalletg rsdaqrdgpt c
//
LOCUS       XP_061011894            1157 aa            linear   MAM 02-DEC-2023
DEFINITION  TBC1 domain family member 8 isoform X1 [Dama dama].
ACCESSION   XP_061011894
VERSION     XP_061011894.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155911.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1157
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1157
                     /product="TBC1 domain family member 8 isoform X1"
                     /calculated_mol_wt=131911
     Region          171..269
                     /region_name="PH-GRAM1_TBC1D8"
                     /note="TBC1 domain family member 8 (TBC1D8; also called
                     Vascular Rab-GAP/TBC-containing protein) Pleckstrin
                     Homology-Glucosyltransferases, Rab-like GTPase activators
                     and Myotubularins (PH-GRAM) domain, repeat 1; cd13349"
                     /db_xref="CDD:270156"
     Region          311..406
                     /region_name="PH-GRAM2_TBC1D8"
                     /note="TBC1 domain family member 8 (TBC1D8; also called
                     Vascular Rab-GAP/TBC-containing protein) Pleckstrin
                     Homology-Glucosyltransferases, Rab-like GTPase activators
                     and Myotubularins (PH-GRAM) domain, repeat 2; cd13353"
                     /db_xref="CDD:270160"
     Region          517..716
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     CDS             1..1157
                     /gene="TBC1D8"
                     /coded_by="XM_061155911.1:83..3556"
                     /db_xref="GeneID:133065149"
ORIGIN      
        1 mwlkpeevll knalklwvtq ksscyfilqr rrghgegggr ltgrlvgald avldsnarva
       61 pfrillqvpg sqvyspiacg ellsgsdvyw avatgatlee inqhwdwleq nllhtlsvfd
      121 nkddiasfvk gkvkaliaee tssrlaeqee epekfrealv kfearfnfpe aeklityysc
      181 ccwkgrvprq gwlylsinhl cfysfflgke lklvvpwvdv qrlertsnvf ltdtirittq
      241 nkerdfsmfl nldevfkime qladvtlrrl ldnegfdldp glqepsqitk rdlearaqne
      301 ffraffrlpr reklhavldc slwtpfsrch tagqmftsds yicfaskeag cckvilplre
      361 vvsiekmedt sllpnpiivs irskmafqfi dlrdrdslve gllarlklvh adhpvhydtt
      421 vdedltspvf hstslcsgnh rfgglemvss rnseekeket sprmhpeafr psgsqspdsr
      481 lsreqikvsl wndhfaeygr tvcmfrteki rklvamgipe slrgrlwllf sdavtdlaah
      541 pgyygnlvee smgkcclvte eierdlhrsl pehpafqnet giaalrrvlt ayahrnpkig
      601 ycqsmnilts vlllyakeee afwllvavce rmlpdyfnqr vigaqvdqsv feelikeqlp
      661 elaehmhdls alasislswf ltlflsimpl esavnvvdcf fydgikaifq lglavleata
      721 edlcsskdds qalmvlsrfl dhvknedspg ppigshhaff sddqepcpvt diadlirdsy
      781 ekfgdqsvaq iehmrcrhri rvlqghedtt kqnvlrvvip evsvlpedle elydlfkreh
      841 mmscyweqpr pmaprhdpsr pyaeqyrida qqfarlfqlv spwtcgahte ilaertfrll
      901 denmdhlief kafvscldim yngemnekik llyrlhippa ltendrdsqs plknpllsts
      961 rplvfgtsng dtidyqkqlk qmikdlakek dktekelpkm sqrefiqfck tlysmfhkdp
     1021 eendlyqaia tvttlllqig evgqrgsssg sgsqeggeel qasapspsse qdlvfaeadt
     1081 gqspqqsqaf peeaqgdwtv slehilasll teqslvnffe kpldikskle naklnqyslk
     1141 tcemsrqsqp elklssp
//
LOCUS       XP_061011895            1142 aa            linear   MAM 02-DEC-2023
DEFINITION  TBC1 domain family member 8 isoform X2 [Dama dama].
ACCESSION   XP_061011895
VERSION     XP_061011895.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155912.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1142
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1142
                     /product="TBC1 domain family member 8 isoform X2"
                     /calculated_mol_wt=130361
     Region          156..254
                     /region_name="PH-GRAM1_TBC1D8"
                     /note="TBC1 domain family member 8 (TBC1D8; also called
                     Vascular Rab-GAP/TBC-containing protein) Pleckstrin
                     Homology-Glucosyltransferases, Rab-like GTPase activators
                     and Myotubularins (PH-GRAM) domain, repeat 1; cd13349"
                     /db_xref="CDD:270156"
     Region          296..391
                     /region_name="PH-GRAM2_TBC1D8"
                     /note="TBC1 domain family member 8 (TBC1D8; also called
                     Vascular Rab-GAP/TBC-containing protein) Pleckstrin
                     Homology-Glucosyltransferases, Rab-like GTPase activators
                     and Myotubularins (PH-GRAM) domain, repeat 2; cd13353"
                     /db_xref="CDD:270160"
     Region          502..701
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     CDS             1..1142
                     /gene="TBC1D8"
                     /coded_by="XM_061155912.1:82..3510"
                     /db_xref="GeneID:133065149"
ORIGIN      
        1 mwlkpeevll knalklwvtq ksscyfilqr rrghgegggr ltgrlvgald avldsnarva
       61 pfrillqvpg sqvyspiacg atleeinqhw dwleqnllht lsvfdnkddi asfvkgkvka
      121 liaeetssrl aeqeeepekf realvkfear fnfpeaekli tyyscccwkg rvprqgwlyl
      181 sinhlcfysf flgkelklvv pwvdvqrler tsnvfltdti rittqnkerd fsmflnldev
      241 fkimeqladv tlrrlldneg fdldpglqep sqitkrdlea raqneffraf frlprreklh
      301 avldcslwtp fsrchtagqm ftsdsyicfa skeagcckvi lplrevvsie kmedtsllpn
      361 piivsirskm afqfidlrdr dslvegllar lklvhadhpv hydttvdedl tspvfhstsl
      421 csgnhrfggl emvssrnsee keketsprmh peafrpsgsq spdsrlsreq ikvslwndhf
      481 aeygrtvcmf rtekirklva mgipeslrgr lwllfsdavt dlaahpgyyg nlveesmgkc
      541 clvteeierd lhrslpehpa fqnetgiaal rrvltayahr npkigycqsm niltsvllly
      601 akeeeafwll vavcermlpd yfnqrvigaq vdqsvfeeli keqlpelaeh mhdlsalasi
      661 slswfltlfl simplesavn vvdcffydgi kaifqlglav leataedlcs skddsqalmv
      721 lsrfldhvkn edspgppigs hhaffsddqe pcpvtdiadl irdsyekfgd qsvaqiehmr
      781 crhrirvlqg hedttkqnvl rvvipevsvl pedleelydl fkrehmmscy weqprpmapr
      841 hdpsrpyaeq yridaqqfar lfqlvspwtc gahteilaer tfrlldenmd hliefkafvs
      901 cldimyngem nekikllyrl hippaltend rdsqsplknp llstsrplvf gtsngdtidy
      961 qkqlkqmikd lakekdktek elpkmsqref iqfcktlysm fhkdpeendl yqaiatvttl
     1021 llqigevgqr gsssgsgsqe ggeelqasap spsseqdlvf aeadtgqspq qsqafpeeaq
     1081 gdwtvslehi lasllteqsl vnffekpldi ksklenakln qyslktcems rqsqpelkls
     1141 sp
//
LOCUS       XP_061011896            1105 aa            linear   MAM 02-DEC-2023
DEFINITION  TBC1 domain family member 8 isoform X3 [Dama dama].
ACCESSION   XP_061011896
VERSION     XP_061011896.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155913.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1105
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1105
                     /product="TBC1 domain family member 8 isoform X3"
                     /calculated_mol_wt=126512
     Region          119..217
                     /region_name="PH-GRAM1_TBC1D8"
                     /note="TBC1 domain family member 8 (TBC1D8; also called
                     Vascular Rab-GAP/TBC-containing protein) Pleckstrin
                     Homology-Glucosyltransferases, Rab-like GTPase activators
                     and Myotubularins (PH-GRAM) domain, repeat 1; cd13349"
                     /db_xref="CDD:270156"
     Region          259..354
                     /region_name="PH-GRAM2_TBC1D8"
                     /note="TBC1 domain family member 8 (TBC1D8; also called
                     Vascular Rab-GAP/TBC-containing protein) Pleckstrin
                     Homology-Glucosyltransferases, Rab-like GTPase activators
                     and Myotubularins (PH-GRAM) domain, repeat 2; cd13353"
                     /db_xref="CDD:270160"
     Region          465..664
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     CDS             1..1105
                     /gene="TBC1D8"
                     /coded_by="XM_061155913.1:82..3399"
                     /db_xref="GeneID:133065149"
ORIGIN      
        1 mwlkpeevll knalklwvtq ksscyfilqr rrghgegggr ltgatleein qhwdwleqnl
       61 lhtlsvfdnk ddiasfvkgk vkaliaeets srlaeqeeep ekfrealvkf earfnfpeae
      121 klityysccc wkgrvprqgw lylsinhlcf ysfflgkelk lvvpwvdvqr lertsnvflt
      181 dtirittqnk erdfsmflnl devfkimeql advtlrrlld negfdldpgl qepsqitkrd
      241 learaqneff raffrlprre klhavldcsl wtpfsrchta gqmftsdsyi cfaskeagcc
      301 kvilplrevv siekmedtsl lpnpiivsir skmafqfidl rdrdslvegl larlklvhad
      361 hpvhydttvd edltspvfhs tslcsgnhrf gglemvssrn seekeketsp rmhpeafrps
      421 gsqspdsrls reqikvslwn dhfaeygrtv cmfrtekirk lvamgipesl rgrlwllfsd
      481 avtdlaahpg yygnlveesm gkcclvteei erdlhrslpe hpafqnetgi aalrrvltay
      541 ahrnpkigyc qsmniltsvl llyakeeeaf wllvavcerm lpdyfnqrvi gaqvdqsvfe
      601 elikeqlpel aehmhdlsal asislswflt lflsimples avnvvdcffy dgikaifqlg
      661 lavleataed lcsskddsqa lmvlsrfldh vknedspgpp igshhaffsd dqepcpvtdi
      721 adlirdsyek fgdqsvaqie hmrcrhrirv lqghedttkq nvlrvvipev svlpedleel
      781 ydlfkrehmm scyweqprpm aprhdpsrpy aeqyridaqq farlfqlvsp wtcgahteil
      841 aertfrllde nmdhliefka fvscldimyn gemnekikll yrlhippalt endrdsqspl
      901 knpllstsrp lvfgtsngdt idyqkqlkqm ikdlakekdk tekelpkmsq refiqfcktl
      961 ysmfhkdpee ndlyqaiatv ttlllqigev gqrgsssgsg sqeggeelqa sapspsseqd
     1021 lvfaeadtgq spqqsqafpe eaqgdwtvsl ehilasllte qslvnffekp ldiksklena
     1081 klnqyslktc emsrqsqpel klssp
//
LOCUS       XP_061011897             125 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein eL31 [Dama dama].
ACCESSION   XP_061011897
VERSION     XP_061011897.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155914.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..125
                     /product="large ribosomal subunit protein eL31"
                     /calculated_mol_wt=14332
     Region          19..100
                     /region_name="Ribosomal_L31e"
                     /note="Ribosomal protein L31e; pfam01198"
                     /db_xref="CDD:460108"
     CDS             1..125
                     /gene="RPL31"
                     /coded_by="XM_061155914.1:118..495"
                     /db_xref="GeneID:133065150"
ORIGIN      
        1 mapakkggek kkgrsainev vtreytinih krihgvgfkk rapralkeir kfamkemgtp
       61 dvridtrlnk avwakgirnv pyrirvrlsr krnededspn klytlvtyvp vttfknlqtv
      121 nvden
//
LOCUS       XP_061011898             821 aa            linear   MAM 02-DEC-2023
DEFINITION  neuronal PAS domain-containing protein 2 isoform X1 [Dama dama].
ACCESSION   XP_061011898
VERSION     XP_061011898.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155915.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..821
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..821
                     /product="neuronal PAS domain-containing protein 2 isoform
                     X1"
                     /calculated_mol_wt=91348
     Region          18..94
                     /region_name="bHLH-PAS_NPAS2_PASD4"
                     /note="basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS)
                     domain found in neuronal PAS domain-containing protein 2
                     (NPAS2) and similar proteins; cd19737"
                     /db_xref="CDD:381580"
     Site            order(28,31..32,35..36,38..39,43,61..62)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381580"
     Site            order(41..42,45..46,48..49,52..53,62..63,66..67,70,73..74,
                     76)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381580"
     Region          101..212
                     /region_name="PAS"
                     /note="PAS fold; pfam00989"
                     /db_xref="CDD:395786"
     Region          267..370
                     /region_name="PAS_11"
                     /note="PAS domain; pfam14598"
                     /db_xref="CDD:464214"
     Region          563..>762
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     CDS             1..821
                     /gene="NPAS2"
                     /coded_by="XM_061155915.1:155..2620"
                     /db_xref="GeneID:133065151"
ORIGIN      
        1 mqmliqddtr kncrdnlmde dekdrakras rnksekkrrd qfnvlikels smlpgntrkm
       61 dkttvlekvi gflqkhnevs aqtevcdiqp dwkpsflsne eftqlmleal dgfiiavttd
      121 gsilyvsdsi tpllghlpsd vmdqnllnfl peqehsevyk mlsshmlvtd tpspeylksd
      181 ndlefychll rgslnpkefp tyeyikfvgn frsynnavps ppcngfdgal srpcrvplgk
      241 evcfiatvrl atpqflkemc ivdepleeft srhslewkfl fldhrappii gylpfevlgt
      301 sgydyyhvdd lellarchqh lmqfgkgksc cyrfltkgqq wiwlqthyyi tyhqwnskpe
      361 fivcthsvvs yaevrverrq elaledplle tvhpsalkdk gsslepqqhf naldlgtsgl
      421 ntshspsass rsshkssrta mseptstpsk lraeastpal prsaqelpvp glsqaaampa
      481 plpapascdl tqqllpqtil qsppapvsqf saqlsmfqti kdqleqrtri lqanirwqqe
      541 elhkiqeqlc lvqdsnvqmf lqqpdgslsf ssaqrsetqq qlqqrsgpgp qlvaspqlpg
      601 qiasaqvtnq hllressvis tqgpkplrss qviqgssltp qfsstttalp salslttpas
      661 asqeapqgqp spdfshdrql rlllsqpiqp mmpgscdarq psevartgrq vkypqsqavf
      721 qspdvhttsg astpvllmgl hpsfptsqps plkpaqaqpq pphflqvqvp tslhseqqds
      781 lllstysqqp gtlgyptpgp arparrvssl sessglqqpp r
//
LOCUS       XP_061011899             820 aa            linear   MAM 02-DEC-2023
DEFINITION  neuronal PAS domain-containing protein 2 isoform X2 [Dama dama].
ACCESSION   XP_061011899
VERSION     XP_061011899.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155916.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..820
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..820
                     /product="neuronal PAS domain-containing protein 2 isoform
                     X2"
                     /calculated_mol_wt=91277
     Region          18..94
                     /region_name="bHLH-PAS_NPAS2_PASD4"
                     /note="basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS)
                     domain found in neuronal PAS domain-containing protein 2
                     (NPAS2) and similar proteins; cd19737"
                     /db_xref="CDD:381580"
     Site            order(28,31..32,35..36,38..39,43,61..62)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381580"
     Site            order(41..42,45..46,48..49,52..53,62..63,66..67,70,73..74,
                     76)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381580"
     Region          101..212
                     /region_name="PAS"
                     /note="PAS fold; pfam00989"
                     /db_xref="CDD:395786"
     Region          266..369
                     /region_name="PAS_11"
                     /note="PAS domain; pfam14598"
                     /db_xref="CDD:464214"
     Region          562..>761
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     CDS             1..820
                     /gene="NPAS2"
                     /coded_by="XM_061155916.1:159..2621"
                     /db_xref="GeneID:133065151"
ORIGIN      
        1 mqmliqddtr kncrdnlmde dekdrakras rnksekkrrd qfnvlikels smlpgntrkm
       61 dkttvlekvi gflqkhnevs aqtevcdiqp dwkpsflsne eftqlmleal dgfiiavttd
      121 gsilyvsdsi tpllghlpsd vmdqnllnfl peqehsevyk mlsshmlvtd tpspeylksd
      181 ndlefychll rgslnpkefp tyeyikfvgn frsynnvpsp pcngfdgals rpcrvplgke
      241 vcfiatvrla tpqflkemci vdepleefts rhslewkflf ldhrappiig ylpfevlgts
      301 gydyyhvddl ellarchqhl mqfgkgkscc yrfltkgqqw iwlqthyyit yhqwnskpef
      361 ivcthsvvsy aevrverrqe laledpllet vhpsalkdkg sslepqqhfn aldlgtsgln
      421 tshspsassr sshkssrtam septstpskl raeastpalp rsaqelpvpg lsqaaampap
      481 lpapascdlt qqllpqtilq sppapvsqfs aqlsmfqtik dqleqrtril qanirwqqee
      541 lhkiqeqlcl vqdsnvqmfl qqpdgslsfs saqrsetqqq lqqrsgpgpq lvaspqlpgq
      601 iasaqvtnqh llressvist qgpkplrssq viqgssltpq fsstttalps alslttpasa
      661 sqeapqgqps pdfshdrqlr lllsqpiqpm mpgscdarqp sevartgrqv kypqsqavfq
      721 spdvhttsga stpvllmglh psfptsqpsp lkpaqaqpqp phflqvqvpt slhseqqdsl
      781 llstysqqpg tlgyptpgpa rparrvssls essglqqppr
//
LOCUS       XP_061011901             696 aa            linear   MAM 02-DEC-2023
DEFINITION  neuronal PAS domain-containing protein 2 isoform X3 [Dama dama].
ACCESSION   XP_061011901
VERSION     XP_061011901.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155918.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..696
                     /product="neuronal PAS domain-containing protein 2 isoform
                     X3"
                     /calculated_mol_wt=77162
     Region          18..94
                     /region_name="bHLH-PAS_NPAS2_PASD4"
                     /note="basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS)
                     domain found in neuronal PAS domain-containing protein 2
                     (NPAS2) and similar proteins; cd19737"
                     /db_xref="CDD:381580"
     Site            order(28,31..32,35..36,38..39,43,61..62)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381580"
     Site            order(41..42,45..46,48..49,52..53,62..63,66..67,70,73..74,
                     76)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381580"
     Region          101..212
                     /region_name="PAS"
                     /note="PAS fold; pfam00989"
                     /db_xref="CDD:395786"
     Region          267..>320
                     /region_name="PAS_11"
                     /note="PAS domain; pfam14598"
                     /db_xref="CDD:464214"
     Region          438..>637
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     CDS             1..696
                     /gene="NPAS2"
                     /coded_by="XM_061155918.1:157..2247"
                     /db_xref="GeneID:133065151"
ORIGIN      
        1 mqmliqddtr kncrdnlmde dekdrakras rnksekkrrd qfnvlikels smlpgntrkm
       61 dkttvlekvi gflqkhnevs aqtevcdiqp dwkpsflsne eftqlmleal dgfiiavttd
      121 gsilyvsdsi tpllghlpsd vmdqnllnfl peqehsevyk mlsshmlvtd tpspeylksd
      181 ndlefychll rgslnpkefp tyeyikfvgn frsynnavps ppcngfdgal srpcrvplgk
      241 evcfiatvrl atpqflkemc ivdepleeft srhslewkfl fldhrappii gylpfevlgt
      301 sgydyyhvdd lellarchqh ptpsklraea stpalprsaq elpvpglsqa aampaplpap
      361 ascdltqqll pqtilqsppa pvsqfsaqls mfqtikdqle qrtrilqani rwqqeelhki
      421 qeqlclvqds nvqmflqqpd gslsfssaqr setqqqlqqr sgpgpqlvas pqlpgqiasa
      481 qvtnqhllre ssvistqgpk plrssqviqg ssltpqfsst ttalpsalsl ttpasasqea
      541 pqgqpspdfs hdrqlrllls qpiqpmmpgs cdarqpseva rtgrqvkypq sqavfqspdv
      601 httsgastpv llmglhpsfp tsqpsplkpa qaqpqpphfl qvqvptslhs eqqdslllst
      661 ysqqpgtlgy ptpgparpar rvsslsessg lqqppr
//
LOCUS       XP_061011902             240 aa            linear   MAM 02-DEC-2023
DEFINITION  phosducin-like protein 3 [Dama dama].
ACCESSION   XP_061011902
VERSION     XP_061011902.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155919.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..240
                     /product="phosducin-like protein 3"
                     /calculated_mol_wt=27453
     Region          8..203
                     /region_name="Phd_like_VIAF"
                     /note="Phosducin (Phd)-like family, Viral inhibitor of
                     apoptosis (IAP)-associated factor (VIAF) subfamily; VIAF
                     is a Phd-like protein that functions in caspase activation
                     during apoptosis. It was identified as an IAP binding
                     protein through a screen of a human...; cd02988"
                     /db_xref="CDD:239286"
     Site            order(8,11..14,17,19..20,22,76,80,171,174..178,201..203)
                     /site_type="other"
                     /note="putative G protein beta interface [polypeptide
                     binding]"
                     /db_xref="CDD:239286"
     CDS             1..240
                     /gene="PDCL3"
                     /coded_by="XM_061155919.1:116..838"
                     /db_xref="GeneID:133065153"
ORIGIN      
        1 mqdpnadtew ndilrkkgil pskedlkdle keaeeeeqri lqqsivktye dmtleeledn
       61 edefneeder aiemyrqqrl aewkatqlkn kfgevleisg edyvqevtka geglwvilhl
      121 ykqgiplcal inqhfsalar kfpdvkfika isttcipnyp drnlptifvy legdikaqfi
      181 gplvfggmsl tldelewkls esgaiktsle enprkpvedv llsavrcsvp arrdsdsedd
//
LOCUS       XP_061011903             376 aa            linear   MAM 02-DEC-2023
DEFINITION  carbohydrate sulfotransferase 10 isoform X1 [Dama dama].
ACCESSION   XP_061011903
VERSION     XP_061011903.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155920.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..376
                     /product="carbohydrate sulfotransferase 10 isoform X1"
                     /calculated_mol_wt=43890
     Region          136..369
                     /region_name="Sulfotransfer_2"
                     /note="Sulfotransferase family; pfam03567"
                     /db_xref="CDD:427369"
     CDS             1..376
                     /gene="CHST10"
                     /coded_by="XM_061155920.1:84..1214"
                     /db_xref="GeneID:133065154"
ORIGIN      
        1 mrsahpqgss qalagkiaew ltfdnmhhqw lllaacfwvl fmfmvaskfi tltfkdpday
       61 sakqdflflt avpdvgrspg ethfpeelkp tgkmlveplv yaqrlelmrn vcredalrnl
      121 shtavskfvl drifvcdkhk ilfcqtpkvg ntqwkkvliv lngafpsiee ipenvvhdhe
      181 knglprlssf sdaeiqkrlk tyfkffivrd pferlisafk dkfvhnprfe pwykheiapg
      241 iirkyrrnrt etrgiqfedf vrylgdpnhr wldlqfgdhi ihwvtyvelc apceitysvv
      301 ghhetledda philreagid hlvsyptipl gitaynrtkv eryflgiskr dirrlyarfe
      361 gdfklfgyqk peflln
//
LOCUS       XP_061011904             283 aa            linear   MAM 02-DEC-2023
DEFINITION  carbohydrate sulfotransferase 10 isoform X2 [Dama dama].
ACCESSION   XP_061011904
VERSION     XP_061011904.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155921.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..283
                     /product="carbohydrate sulfotransferase 10 isoform X2"
                     /calculated_mol_wt=33405
     Region          43..276
                     /region_name="Sulfotransfer_2"
                     /note="Sulfotransferase family; pfam03567"
                     /db_xref="CDD:427369"
     CDS             1..283
                     /gene="CHST10"
                     /coded_by="XM_061155921.1:242..1093"
                     /db_xref="GeneID:133065154"
ORIGIN      
        1 mlveplvyaq rlelmrnvcr edalrnlsht avskfvldri fvcdkhkilf cqtpkvgntq
       61 wkkvlivlng afpsieeipe nvvhdhekng lprlssfsda eiqkrlktyf kffivrdpfe
      121 rlisafkdkf vhnprfepwy kheiapgiir kyrrnrtetr giqfedfvry lgdpnhrwld
      181 lqfgdhiihw vtyvelcapc eitysvvghh etleddaphi lreagidhlv syptiplgit
      241 aynrtkvery flgiskrdir rlyarfegdf klfgyqkpef lln
//
LOCUS       XP_061011905             351 aa            linear   MAM 02-DEC-2023
DEFINITION  carbohydrate sulfotransferase 10 isoform X3 [Dama dama].
ACCESSION   XP_061011905
VERSION     XP_061011905.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155922.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..351
                     /product="carbohydrate sulfotransferase 10 isoform X3"
                     /calculated_mol_wt=41192
     Region          111..344
                     /region_name="Sulfotransfer_2"
                     /note="Sulfotransferase family; pfam03567"
                     /db_xref="CDD:427369"
     CDS             1..351
                     /gene="CHST10"
                     /coded_by="XM_061155922.1:279..1334"
                     /db_xref="GeneID:133065154"
ORIGIN      
        1 mhhqwlllaa cfwvlfmfmv askfitltfk dpdaysakqd flfltavpdv grspgethfp
       61 eelkptgkml veplvyaqrl elmrnvcred alrnlshtav skfvldrifv cdkhkilfcq
      121 tpkvgntqwk kvlivlngaf psieeipenv vhdheknglp rlssfsdaei qkrlktyfkf
      181 fivrdpferl isafkdkfvh nprfepwykh eiapgiirky rrnrtetrgi qfedfvrylg
      241 dpnhrwldlq fgdhiihwvt yvelcapcei tysvvghhet leddaphilr eagidhlvsy
      301 ptiplgitay nrtkveryfl giskrdirrl yarfegdfkl fgyqkpefll n
//
LOCUS       XP_061011906            1250 aa            linear   MAM 02-DEC-2023
DEFINITION  AF4/FMR2 family member 3 isoform X1 [Dama dama].
ACCESSION   XP_061011906
VERSION     XP_061011906.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155923.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1250
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1250
                     /product="AF4/FMR2 family member 3 isoform X1"
                     /calculated_mol_wt=135300
     Region          45..496
                     /region_name="AF-4"
                     /note="AF-4 proto-oncoprotein N-terminal region;
                     pfam05110"
                     /db_xref="CDD:461550"
     Region          791..804
                     /region_name="AF4_int"
                     /note="AF4 interaction motif; pfam18875"
                     /db_xref="CDD:436798"
     Region          989..1249
                     /region_name="AF-4_C"
                     /note="AF-4 proto-oncoprotein C-terminal region;
                     pfam18876"
                     /db_xref="CDD:465894"
     CDS             1..1250
                     /gene="AFF3"
                     /coded_by="XM_061155923.1:194..3946"
                     /db_xref="GeneID:133065155"
ORIGIN      
        1 mdsfdlallq ewdleslwge dilnqrndsl vvefqssasr crsvyepdrn vlrrkererr
       61 nqeaqqddgt fnssyslfse pyktnkgdel snrlqntlgn ydemkdfltd rsnqshlvgv
      121 pkpgvpqapv tkidehfvad srtqtqpasv csttsapaam pgqqskrgtv gwqkaghpps
      181 dgqqratqqg alrtllgdgv grqqprtkqv cnvevglqtq drppamgakh sssghcvqnf
      241 ppslaskpsl vqqkptayvr pmdgqdqapd espklksste tgvhclyrgv paaksesara
      301 kaklskfsip kqgeesrsge tnscveeiir emtwppplaa iqppgkveps kfpfpnkdsq
      361 lassghnnpk kgdaepespd nctsntsmle ddlklssdee eneqqaaqrt alhalsdsag
      421 lqpadcrasa psskgsssgs sssgsssssd setssgsdse tesssseseg skpahysspe
      481 aepassnkwq ldkwlnkvnh hkppvliqne shhgpessey ytpvkedtqd cgklpdvcpp
      541 glrdkdikga ckeeqrprta nkapgskgvk qksppaavav avtaaaaapp pavpgapaes
      601 apaparrsag kkparrtert sagdsgprpe epvaaealga saglppeppk prpcgnsrtn
      661 hrkelrsavt cekrrtrgls rivpkskefi etesssssss sdsdleseqe dyplskavaa
      721 aaaaasgndp rlkeapssis gggprapvgs inarttsdia keleeqfytl vpfgrnells
      781 plkdsdevrs lwvkidltll sripehlpqe pgvlsapaak dsesappsha seapvektlp
      841 kskrkrkcdn eddyreikka pgeresasrl tasansalpa nhcsmninsl aipinknekm
      901 lrspisplsd askhkfsged ltsssrsnsn glftstssnk khkvesqlqt haadltkaah
      961 nnsesilhks rpqtepwspg anghrdckrq klifddmprs adyfmqeakr mkhkadamve
     1021 kfgkalnyae aalsfiecgn ameqgpmesk spytmysetv eliryamrlk thsspnatpe
     1081 dkqlaalcyr clallywrmf rlkrdhavky skalidyfkn sskaaqapsp wgasgkstgt
     1141 pspmspnpsp tgsvgsqgsl snasalspst ivsipqrihq maanhvsitn silhsydywe
     1201 madnlakenr effndldllm gpvtlhssme hlvqysqqgl hwlrnsahla
//
LOCUS       XP_061011907            1225 aa            linear   MAM 02-DEC-2023
DEFINITION  AF4/FMR2 family member 3 isoform X2 [Dama dama].
ACCESSION   XP_061011907
VERSION     XP_061011907.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155924.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1225
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1225
                     /product="AF4/FMR2 family member 3 isoform X2"
                     /calculated_mol_wt=132424
     Region          20..471
                     /region_name="AF-4"
                     /note="AF-4 proto-oncoprotein N-terminal region;
                     pfam05110"
                     /db_xref="CDD:461550"
     Region          766..779
                     /region_name="AF4_int"
                     /note="AF4 interaction motif; pfam18875"
                     /db_xref="CDD:436798"
     Region          964..1224
                     /region_name="AF-4_C"
                     /note="AF-4 proto-oncoprotein C-terminal region;
                     pfam18876"
                     /db_xref="CDD:465894"
     CDS             1..1225
                     /gene="AFF3"
                     /coded_by="XM_061155924.1:194..3871"
                     /db_xref="GeneID:133065155"
ORIGIN      
        1 mdsfdlallq ewdleslcvy epdrnvlrrk ererrnqeaq qddgtfnssy slfsepyktn
       61 kgdelsnrlq ntlgnydemk dfltdrsnqs hlvgvpkpgv pqapvtkide hfvadsrtqt
      121 qpasvcstts apaampgqqs krgtvgwqka ghppsdgqqr atqqgalrtl lgdgvgrqqp
      181 rtkqvcnvev glqtqdrppa mgakhsssgh cvqnfppsla skpslvqqkp tayvrpmdgq
      241 dqapdespkl ksstetgvhc lyrgvpaaks esarakakls kfsipkqgee srsgetnscv
      301 eeiiremtwp pplaaiqppg kvepskfpfp nkdsqlassg hnnpkkgdae pespdnctsn
      361 tsmleddlkl ssdeeeneqq aaqrtalhal sdsaglqpad crasapsskg sssgssssgs
      421 ssssdsetss gsdsetesss sesegskpah ysspeaepas snkwqldkwl nkvnhhkppv
      481 liqneshhgp esseyytpvk edtqdcgklp dvcppglrdk dikgackeeq rprtankapg
      541 skgvkqkspp aavavavtaa aaapppavpg apaesapapa rrsagkkpar rtertsagds
      601 gprpeepvaa ealgasaglp peppkprpcg nsrtnhrkel rsavtcekrr trglsrivpk
      661 skefietess ssssssdsdl eseqedypls kavaaaaaaa sgndprlkea pssisgggpr
      721 apvgsinart tsdiakelee qfytlvpfgr nellsplkds devrslwvki dltllsripe
      781 hlpqepgvls apaakdsesa ppshaseapv ektlpkskrk rkcdneddyr eikkapgere
      841 sasrltasan salpanhcsm ninslaipin knekmlrspi splsdaskhk fsgedltsss
      901 rsnsnglfts tssnkkhkve sqlqthaadl tkaahnnses ilhksrpqte pwspganghr
      961 dckrqklifd dmprsadyfm qeakrmkhka damvekfgka lnyaeaalsf iecgnameqg
     1021 pmeskspytm ysetveliry amrlkthssp natpedkqla alcyrclall ywrmfrlkrd
     1081 havkyskali dyfknsskaa qapspwgasg kstgtpspms pnpsptgsvg sqgslsnasa
     1141 lspstivsip qrihqmaanh vsitnsilhs ydywemadnl akenreffnd ldllmgpvtl
     1201 hssmehlvqy sqqglhwlrn sahla
//
LOCUS       XP_061011908            1252 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA repair protein REV1 isoform X1 [Dama dama].
ACCESSION   XP_061011908
VERSION     XP_061011908.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155925.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1252
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1252
                     /product="DNA repair protein REV1 isoform X1"
                     /calculated_mol_wt=136775
     Region          47..130
                     /region_name="BRCT_Rev1"
                     /note="BRCT domain of DNA repair protein Rev1 and similar
                     proteins; cd17719"
                     /db_xref="CDD:349351"
     Region          348..824
                     /region_name="PolY_Rev1"
                     /note="DNA polymerase Rev1; cd01701"
                     /db_xref="CDD:176455"
     Site            order(351..353,355..359,361..362,369,423..428,448,
                     509..510,513,516,522..523,525,567..568,570..571,625,
                     649..656,659,685..686,710..718,752,773..775,779..783,785)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176455"
     Site            order(357,423..428,509..510,513,516,522,570..571,625)
                     /site_type="active"
                     /db_xref="CDD:176455"
     Region          929..962
                     /region_name="Rev1_UBM2"
                     /note="Ubiquitin-Binding Motif 2 (UBM2) of Y-family
                     polymerase Rev1; cd19318"
                     /db_xref="CDD:412037"
     Site            order(931..933,937..939,941..942,945..947,949..950,953,
                     957)
                     /site_type="other"
                     /note="ubiquitin binding interface [polypeptide binding]"
                     /db_xref="CDD:412037"
     Region          1005..1040
                     /region_name="Rev1_UBM2"
                     /note="Ubiquitin-Binding Motif 2 (UBM2) of Y-family
                     polymerase Rev1; cd19318"
                     /db_xref="CDD:412037"
     Site            order(1009..1011,1015..1017,1019..1020,1023..1025,
                     1027..1028,1031,1035)
                     /site_type="other"
                     /note="ubiquitin binding interface [polypeptide binding]"
                     /db_xref="CDD:412037"
     Region          1158..1251
                     /region_name="Rev1_C"
                     /note="C-terminal domain of the Y-family polymerase Rev1;
                     cd12145"
                     /db_xref="CDD:213388"
     Site            order(1159..1164,1172..1173,1176,1180,1182..1184,
                     1186..1187,1190..1191)
                     /site_type="other"
                     /note="Polymerase eta interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:213388"
     CDS             1..1252
                     /gene="REV1"
                     /coded_by="XM_061155925.1:142..3900"
                     /db_xref="GeneID:133065157"
ORIGIN      
        1 mrrggwrkra eddwekwggy maakvqkleq qfrsdaaiqk dgtsstifsg vaiyvngytd
       61 psaeelrklm mlhggqyhvy ysrsktthii atnlpnakik elkgekvirp ewivesikag
      121 rllsyipyql yskqssvqks lnfspvckpe dplpgpssia qqlsdrvnhi ikkietesev
      181 rvngvnswne eaadndfdfv glqpvfpgrk qngiphprdg ralcnghahs shgalksldc
      241 lappgsgvss rlsaeparee aagpersrga frdcavqpaq qstcsadalr dphrtkpfss
      301 pslhsnprvn gahhstvqgp sstkstssvp apgrgspsgp prpsdcnfis dfysrsrlhh
      361 istwkcelte fvnmlqrqns gifpgreklk kmkagrsalv vtdtgnmsvl ssprhqscim
      421 hvdmdcffvs vgirnrpdlk gkpvavtsnr gtgraplrpg anpqlewqyy qnkilrgkaa
      481 eipdpstwes qdsaqingtd svlskaeias csyearqvgi rngmffgqak qlcpslqavp
      541 ydfhaykeva rtmyetlasy thnieavscd ealvditeil aetrltpdef anavrmeikd
      601 qtkcaasvgi gsnillarma trkakpdgqy hlkpeevddf irgqlvtnlp gvgrsmeskl
      661 mslgirtcgd lqymtmaklq kefgpktgqm lyrfcrgldd rpvrtekerk svsaeinygi
      721 rfsqpkeaea fllslseeiq rrleavgmkg krltlkimvr kpgapvetak ygghgicdit
      781 trtvtldqat dsakligtaa lnmfhamkln isdmrgvgih vnqlvptnpn ppaclsrtaa
      841 qpshgsggap svlellqaqr arqppeeepa qvflaavdle vpaasrsctv pslpltsgaa
      901 pvsaskaeca skwnglhspv sfksrlnlsi evpspsqldr svlealppdl reqveqacav
      961 qqaeprgerl repingcstg ilpqpvgtvl lqipapqdps sdtginlial pafsqvdpev
     1021 fsalpaelqk elraaydqrq rqgehappqq pagapvpknp llqlkpaaak dkkrnkkksp
     1081 lspqrkiqsp lkttlvnspa ktqpgactsp qklidgflkq egstsekalg elsastsgva
     1141 glsglqpdvs tsvrppapnl agavefsdvk tllrewitti sdpmeedilq vvkyctdlie
     1201 ekdlekldlv ikymkrlmqq svesvwnmaf dfildnvqvv lqqtygstlk vt
//
LOCUS       XP_061011909            1252 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA repair protein REV1 isoform X1 [Dama dama].
ACCESSION   XP_061011909
VERSION     XP_061011909.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155926.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1252
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1252
                     /product="DNA repair protein REV1 isoform X1"
                     /calculated_mol_wt=136775
     Region          47..130
                     /region_name="BRCT_Rev1"
                     /note="BRCT domain of DNA repair protein Rev1 and similar
                     proteins; cd17719"
                     /db_xref="CDD:349351"
     Region          348..824
                     /region_name="PolY_Rev1"
                     /note="DNA polymerase Rev1; cd01701"
                     /db_xref="CDD:176455"
     Site            order(351..353,355..359,361..362,369,423..428,448,
                     509..510,513,516,522..523,525,567..568,570..571,625,
                     649..656,659,685..686,710..718,752,773..775,779..783,785)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176455"
     Site            order(357,423..428,509..510,513,516,522,570..571,625)
                     /site_type="active"
                     /db_xref="CDD:176455"
     Region          929..962
                     /region_name="Rev1_UBM2"
                     /note="Ubiquitin-Binding Motif 2 (UBM2) of Y-family
                     polymerase Rev1; cd19318"
                     /db_xref="CDD:412037"
     Site            order(931..933,937..939,941..942,945..947,949..950,953,
                     957)
                     /site_type="other"
                     /note="ubiquitin binding interface [polypeptide binding]"
                     /db_xref="CDD:412037"
     Region          1005..1040
                     /region_name="Rev1_UBM2"
                     /note="Ubiquitin-Binding Motif 2 (UBM2) of Y-family
                     polymerase Rev1; cd19318"
                     /db_xref="CDD:412037"
     Site            order(1009..1011,1015..1017,1019..1020,1023..1025,
                     1027..1028,1031,1035)
                     /site_type="other"
                     /note="ubiquitin binding interface [polypeptide binding]"
                     /db_xref="CDD:412037"
     Region          1158..1251
                     /region_name="Rev1_C"
                     /note="C-terminal domain of the Y-family polymerase Rev1;
                     cd12145"
                     /db_xref="CDD:213388"
     Site            order(1159..1164,1172..1173,1176,1180,1182..1184,
                     1186..1187,1190..1191)
                     /site_type="other"
                     /note="Polymerase eta interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:213388"
     CDS             1..1252
                     /gene="REV1"
                     /coded_by="XM_061155926.1:155..3913"
                     /db_xref="GeneID:133065157"
ORIGIN      
        1 mrrggwrkra eddwekwggy maakvqkleq qfrsdaaiqk dgtsstifsg vaiyvngytd
       61 psaeelrklm mlhggqyhvy ysrsktthii atnlpnakik elkgekvirp ewivesikag
      121 rllsyipyql yskqssvqks lnfspvckpe dplpgpssia qqlsdrvnhi ikkietesev
      181 rvngvnswne eaadndfdfv glqpvfpgrk qngiphprdg ralcnghahs shgalksldc
      241 lappgsgvss rlsaeparee aagpersrga frdcavqpaq qstcsadalr dphrtkpfss
      301 pslhsnprvn gahhstvqgp sstkstssvp apgrgspsgp prpsdcnfis dfysrsrlhh
      361 istwkcelte fvnmlqrqns gifpgreklk kmkagrsalv vtdtgnmsvl ssprhqscim
      421 hvdmdcffvs vgirnrpdlk gkpvavtsnr gtgraplrpg anpqlewqyy qnkilrgkaa
      481 eipdpstwes qdsaqingtd svlskaeias csyearqvgi rngmffgqak qlcpslqavp
      541 ydfhaykeva rtmyetlasy thnieavscd ealvditeil aetrltpdef anavrmeikd
      601 qtkcaasvgi gsnillarma trkakpdgqy hlkpeevddf irgqlvtnlp gvgrsmeskl
      661 mslgirtcgd lqymtmaklq kefgpktgqm lyrfcrgldd rpvrtekerk svsaeinygi
      721 rfsqpkeaea fllslseeiq rrleavgmkg krltlkimvr kpgapvetak ygghgicdit
      781 trtvtldqat dsakligtaa lnmfhamkln isdmrgvgih vnqlvptnpn ppaclsrtaa
      841 qpshgsggap svlellqaqr arqppeeepa qvflaavdle vpaasrsctv pslpltsgaa
      901 pvsaskaeca skwnglhspv sfksrlnlsi evpspsqldr svlealppdl reqveqacav
      961 qqaeprgerl repingcstg ilpqpvgtvl lqipapqdps sdtginlial pafsqvdpev
     1021 fsalpaelqk elraaydqrq rqgehappqq pagapvpknp llqlkpaaak dkkrnkkksp
     1081 lspqrkiqsp lkttlvnspa ktqpgactsp qklidgflkq egstsekalg elsastsgva
     1141 glsglqpdvs tsvrppapnl agavefsdvk tllrewitti sdpmeedilq vvkyctdlie
     1201 ekdlekldlv ikymkrlmqq svesvwnmaf dfildnvqvv lqqtygstlk vt
//
LOCUS       XP_061011910            1251 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA repair protein REV1 isoform X2 [Dama dama].
ACCESSION   XP_061011910
VERSION     XP_061011910.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155927.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1251
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1251
                     /product="DNA repair protein REV1 isoform X2"
                     /calculated_mol_wt=136704
     Region          47..130
                     /region_name="BRCT_Rev1"
                     /note="BRCT domain of DNA repair protein Rev1 and similar
                     proteins; cd17719"
                     /db_xref="CDD:349351"
     Region          348..823
                     /region_name="PolY_Rev1"
                     /note="DNA polymerase Rev1; cd01701"
                     /db_xref="CDD:176455"
     Site            order(351..353,355..359,361..362,369,423..428,448,
                     508..509,512,515,521..522,524,566..567,569..570,624,
                     648..655,658,684..685,709..717,751,772..774,778..782,784)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176455"
     Site            order(357,423..428,508..509,512,515,521,569..570,624)
                     /site_type="active"
                     /db_xref="CDD:176455"
     Region          928..961
                     /region_name="Rev1_UBM2"
                     /note="Ubiquitin-Binding Motif 2 (UBM2) of Y-family
                     polymerase Rev1; cd19318"
                     /db_xref="CDD:412037"
     Site            order(930..932,936..938,940..941,944..946,948..949,952,
                     956)
                     /site_type="other"
                     /note="ubiquitin binding interface [polypeptide binding]"
                     /db_xref="CDD:412037"
     Region          1004..1039
                     /region_name="Rev1_UBM2"
                     /note="Ubiquitin-Binding Motif 2 (UBM2) of Y-family
                     polymerase Rev1; cd19318"
                     /db_xref="CDD:412037"
     Site            order(1008..1010,1014..1016,1018..1019,1022..1024,
                     1026..1027,1030,1034)
                     /site_type="other"
                     /note="ubiquitin binding interface [polypeptide binding]"
                     /db_xref="CDD:412037"
     Region          1157..1250
                     /region_name="Rev1_C"
                     /note="C-terminal domain of the Y-family polymerase Rev1;
                     cd12145"
                     /db_xref="CDD:213388"
     Site            order(1158..1163,1171..1172,1175,1179,1181..1183,
                     1185..1186,1189..1190)
                     /site_type="other"
                     /note="Polymerase eta interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:213388"
     CDS             1..1251
                     /gene="REV1"
                     /coded_by="XM_061155927.1:142..3897"
                     /db_xref="GeneID:133065157"
ORIGIN      
        1 mrrggwrkra eddwekwggy maakvqkleq qfrsdaaiqk dgtsstifsg vaiyvngytd
       61 psaeelrklm mlhggqyhvy ysrsktthii atnlpnakik elkgekvirp ewivesikag
      121 rllsyipyql yskqssvqks lnfspvckpe dplpgpssia qqlsdrvnhi ikkietesev
      181 rvngvnswne eaadndfdfv glqpvfpgrk qngiphprdg ralcnghahs shgalksldc
      241 lappgsgvss rlsaeparee aagpersrga frdcavqpaq qstcsadalr dphrtkpfss
      301 pslhsnprvn gahhstvqgp sstkstssvp apgrgspsgp prpsdcnfis dfysrsrlhh
      361 istwkcelte fvnmlqrqns gifpgreklk kmkagrsalv vtdtgnmsvl ssprhqscim
      421 hvdmdcffvs vgirnrpdlk gkpvavtsnr gtgraplrpg anpqlewqyy qnkilrgkae
      481 ipdpstwesq dsaqingtds vlskaeiasc syearqvgir ngmffgqakq lcpslqavpy
      541 dfhaykevar tmyetlasyt hnieavscde alvditeila etrltpdefa navrmeikdq
      601 tkcaasvgig snillarmat rkakpdgqyh lkpeevddfi rgqlvtnlpg vgrsmesklm
      661 slgirtcgdl qymtmaklqk efgpktgqml yrfcrglddr pvrtekerks vsaeinygir
      721 fsqpkeaeaf llslseeiqr rleavgmkgk rltlkimvrk pgapvetaky gghgicditt
      781 rtvtldqatd sakligtaal nmfhamklni sdmrgvgihv nqlvptnpnp paclsrtaaq
      841 pshgsggaps vlellqaqra rqppeeepaq vflaavdlev paasrsctvp slpltsgaap
      901 vsaskaecas kwnglhspvs fksrlnlsie vpspsqldrs vlealppdlr eqveqacavq
      961 qaeprgerlr epingcstgi lpqpvgtvll qipapqdpss dtginlialp afsqvdpevf
     1021 salpaelqke lraaydqrqr qgehappqqp agapvpknpl lqlkpaaakd kkrnkkkspl
     1081 spqrkiqspl kttlvnspak tqpgactspq klidgflkqe gstsekalge lsastsgvag
     1141 lsglqpdvst svrppapnla gavefsdvkt llrewittis dpmeedilqv vkyctdliee
     1201 kdlekldlvi kymkrlmqqs vesvwnmafd fildnvqvvl qqtygstlkv t
//
LOCUS       XP_061011911            1183 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA repair protein REV1 isoform X3 [Dama dama].
ACCESSION   XP_061011911
VERSION     XP_061011911.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155928.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1183
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1183
                     /product="DNA repair protein REV1 isoform X3"
                     /calculated_mol_wt=128907
     Region          <1..61
                     /region_name="BRCT_Rev1"
                     /note="BRCT domain of DNA repair protein Rev1 and similar
                     proteins; cd17719"
                     /db_xref="CDD:349351"
     Region          279..755
                     /region_name="PolY_Rev1"
                     /note="DNA polymerase Rev1; cd01701"
                     /db_xref="CDD:176455"
     Site            order(282..284,286..290,292..293,300,354..359,379,
                     440..441,444,447,453..454,456,498..499,501..502,556,
                     580..587,590,616..617,641..649,683,704..706,710..714,716)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176455"
     Site            order(288,354..359,440..441,444,447,453,501..502,556)
                     /site_type="active"
                     /db_xref="CDD:176455"
     Region          860..893
                     /region_name="Rev1_UBM2"
                     /note="Ubiquitin-Binding Motif 2 (UBM2) of Y-family
                     polymerase Rev1; cd19318"
                     /db_xref="CDD:412037"
     Site            order(862..864,868..870,872..873,876..878,880..881,884,
                     888)
                     /site_type="other"
                     /note="ubiquitin binding interface [polypeptide binding]"
                     /db_xref="CDD:412037"
     Region          936..971
                     /region_name="Rev1_UBM2"
                     /note="Ubiquitin-Binding Motif 2 (UBM2) of Y-family
                     polymerase Rev1; cd19318"
                     /db_xref="CDD:412037"
     Site            order(940..942,946..948,950..951,954..956,958..959,962,
                     966)
                     /site_type="other"
                     /note="ubiquitin binding interface [polypeptide binding]"
                     /db_xref="CDD:412037"
     Region          1089..1182
                     /region_name="Rev1_C"
                     /note="C-terminal domain of the Y-family polymerase Rev1;
                     cd12145"
                     /db_xref="CDD:213388"
     Site            order(1090..1095,1103..1104,1107,1111,1113..1115,
                     1117..1118,1121..1122)
                     /site_type="other"
                     /note="Polymerase eta interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:213388"
     CDS             1..1183
                     /gene="REV1"
                     /coded_by="XM_061155928.1:122..3673"
                     /db_xref="GeneID:133065157"
ORIGIN      
        1 mmlhggqyhv yysrsktthi iatnlpnaki kelkgekvir pewivesika grllsyipyq
       61 lyskqssvqk slnfspvckp edplpgpssi aqqlsdrvnh iikkietese vrvngvnswn
      121 eeaadndfdf vglqpvfpgr kqngiphprd gralcnghah sshgalksld clappgsgvs
      181 srlsaepare eaagpersrg afrdcavqpa qqstcsadal rdphrtkpfs spslhsnprv
      241 ngahhstvqg psstkstssv papgrgspsg pprpsdcnfi sdfysrsrlh histwkcelt
      301 efvnmlqrqn sgifpgrekl kkmkagrsal vvtdtgnmsv lssprhqsci mhvdmdcffv
      361 svgirnrpdl kgkpvavtsn rgtgraplrp ganpqlewqy yqnkilrgka aeipdpstwe
      421 sqdsaqingt dsvlskaeia scsyearqvg irngmffgqa kqlcpslqav pydfhaykev
      481 artmyetlas ythnieavsc dealvditei laetrltpde fanavrmeik dqtkcaasvg
      541 igsnillarm atrkakpdgq yhlkpeevdd firgqlvtnl pgvgrsmesk lmslgirtcg
      601 dlqymtmakl qkefgpktgq mlyrfcrgld drpvrteker ksvsaeinyg irfsqpkeae
      661 afllslseei qrrleavgmk gkrltlkimv rkpgapveta kygghgicdi ttrtvtldqa
      721 tdsakligta alnmfhamkl nisdmrgvgi hvnqlvptnp nppaclsrta aqpshgsgga
      781 psvlellqaq rarqppeeep aqvflaavdl evpaasrsct vpslpltsga apvsaskaec
      841 askwnglhsp vsfksrlnls ievpspsqld rsvlealppd lreqveqaca vqqaeprger
      901 lrepingcst gilpqpvgtv llqipapqdp ssdtginlia lpafsqvdpe vfsalpaelq
      961 kelraaydqr qrqgehappq qpagapvpkn pllqlkpaaa kdkkrnkkks plspqrkiqs
     1021 plkttlvnsp aktqpgacts pqklidgflk qegstsekal gelsastsgv aglsglqpdv
     1081 stsvrppapn lagavefsdv ktllrewitt isdpmeedil qvvkyctdli eekdlekldl
     1141 vikymkrlmq qsvesvwnma fdfildnvqv vlqqtygstl kvt
//
LOCUS       XP_061011912            1160 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA repair protein REV1 isoform X4 [Dama dama].
ACCESSION   XP_061011912
VERSION     XP_061011912.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155929.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1160
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1160
                     /product="DNA repair protein REV1 isoform X4"
                     /calculated_mol_wt=126480
     Region          47..130
                     /region_name="BRCT_Rev1"
                     /note="BRCT domain of DNA repair protein Rev1 and similar
                     proteins; cd17719"
                     /db_xref="CDD:349351"
     Region          348..824
                     /region_name="PolY_Rev1"
                     /note="DNA polymerase Rev1; cd01701"
                     /db_xref="CDD:176455"
     Site            order(351..353,355..359,361..362,369,423..428,448,
                     509..510,513,516,522..523,525,567..568,570..571,625,
                     649..656,659,685..686,710..718,752,773..775,779..783,785)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176455"
     Site            order(357,423..428,509..510,513,516,522,570..571,625)
                     /site_type="active"
                     /db_xref="CDD:176455"
     Region          929..962
                     /region_name="Rev1_UBM2"
                     /note="Ubiquitin-Binding Motif 2 (UBM2) of Y-family
                     polymerase Rev1; cd19318"
                     /db_xref="CDD:412037"
     Site            order(931..933,937..939,941..942,945..947,949..950,953,
                     957)
                     /site_type="other"
                     /note="ubiquitin binding interface [polypeptide binding]"
                     /db_xref="CDD:412037"
     Region          1005..1040
                     /region_name="Rev1_UBM2"
                     /note="Ubiquitin-Binding Motif 2 (UBM2) of Y-family
                     polymerase Rev1; cd19318"
                     /db_xref="CDD:412037"
     Site            order(1009..1011,1015..1017,1019..1020,1023..1025,
                     1027..1028,1031,1035)
                     /site_type="other"
                     /note="ubiquitin binding interface [polypeptide binding]"
                     /db_xref="CDD:412037"
     CDS             1..1160
                     /gene="REV1"
                     /coded_by="XM_061155929.1:144..3626"
                     /db_xref="GeneID:133065157"
ORIGIN      
        1 mrrggwrkra eddwekwggy maakvqkleq qfrsdaaiqk dgtsstifsg vaiyvngytd
       61 psaeelrklm mlhggqyhvy ysrsktthii atnlpnakik elkgekvirp ewivesikag
      121 rllsyipyql yskqssvqks lnfspvckpe dplpgpssia qqlsdrvnhi ikkietesev
      181 rvngvnswne eaadndfdfv glqpvfpgrk qngiphprdg ralcnghahs shgalksldc
      241 lappgsgvss rlsaeparee aagpersrga frdcavqpaq qstcsadalr dphrtkpfss
      301 pslhsnprvn gahhstvqgp sstkstssvp apgrgspsgp prpsdcnfis dfysrsrlhh
      361 istwkcelte fvnmlqrqns gifpgreklk kmkagrsalv vtdtgnmsvl ssprhqscim
      421 hvdmdcffvs vgirnrpdlk gkpvavtsnr gtgraplrpg anpqlewqyy qnkilrgkaa
      481 eipdpstwes qdsaqingtd svlskaeias csyearqvgi rngmffgqak qlcpslqavp
      541 ydfhaykeva rtmyetlasy thnieavscd ealvditeil aetrltpdef anavrmeikd
      601 qtkcaasvgi gsnillarma trkakpdgqy hlkpeevddf irgqlvtnlp gvgrsmeskl
      661 mslgirtcgd lqymtmaklq kefgpktgqm lyrfcrgldd rpvrtekerk svsaeinygi
      721 rfsqpkeaea fllslseeiq rrleavgmkg krltlkimvr kpgapvetak ygghgicdit
      781 trtvtldqat dsakligtaa lnmfhamkln isdmrgvgih vnqlvptnpn ppaclsrtaa
      841 qpshgsggap svlellqaqr arqppeeepa qvflaavdle vpaasrsctv pslpltsgaa
      901 pvsaskaeca skwnglhspv sfksrlnlsi evpspsqldr svlealppdl reqveqacav
      961 qqaeprgerl repingcstg ilpqpvgtvl lqipapqdps sdtginlial pafsqvdpev
     1021 fsalpaelqk elraaydqrq rqgehappqq pagapvpknp llqlkpaaak dkkrnkkksp
     1081 lspqrkiqsp lkttlvnspa ktqpgactsp qklidgflkq egstsekalv llaflgcslt
     1141 cpqvsgpprp twlepwssvt
//
LOCUS       XP_061011913            1219 aa            linear   MAM 02-DEC-2023
DEFINITION  eukaryotic translation initiation factor 5B isoform X1 [Dama dama].
ACCESSION   XP_061011913
VERSION     XP_061011913.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155930.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1219
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1219
                     /product="eukaryotic translation initiation factor 5B
                     isoform X1"
                     /calculated_mol_wt=138262
     Region          626..1201
                     /region_name="PRK04004"
                     /note="translation initiation factor IF-2; Validated;
                     cl44330"
                     /db_xref="CDD:457675"
     CDS             1..1219
                     /gene="EIF5B"
                     /coded_by="XM_061155930.1:176..3835"
                     /db_xref="GeneID:133065159"
ORIGIN      
        1 mgkkqknkse dsakddidld alaaeiegag aakeqepqka kgkkkkekkr qdfdeddilk
       61 eleelsweaq gikadrepaa vkptennede piskqdkkkk gqkgkkqsfe dndseeleek
      121 dlkskktakp kvemysgsdd dddfnklskk akgkaqksnk krdaseeded nskrikermr
      181 ahssgesgde sdeflqsrkg qkknqknkpg ptvesgnedd dssfkiktva qkkaekkere
      241 rkkrdeekak lrklkekeel esgkkdqgkp kefqrkleee pvkskvtlds gaapaseekg
      301 egptgaeddn egdkkkkdkk kkkgekeeke kekkkgpska tvkamqeala klkeeeerqk
      361 reeeerikrl eeleakrkee erleqekrer kkqkekerke rlkkegkllt ksqrearara
      421 eatlkllqaq gvevpskdsl pkkrpiyedk kkkkppqqme nkvsepvels atveaveqgg
      481 pekeetpppv epeeeeeted aglddweama sdeereteen tvhievkenp eeeeeeeeee
      541 eeeeeseeee edegdsegse geeddekvsd ekdagktldk kpskdvsses eydsdddrtk
      601 eeraydkakr riekrrlehs knvnteklra pvicvlghvd tgktkildkl rhthvqdgea
      661 ggitqqigat nvpleaineq tkmiksfdre nvripgmlii dtpghesfsn lrnrgsslcd
      721 iailvvdimh glepqtiesi nllkskkcpf ivalnkidrl ydwkkspdsd vaatlkkqkk
      781 ntrdefeera kaiivefaqq glnaalfyen kdprtfvslv ptsahtgdgm gslicllvel
      841 tqtmlskrla qceelraqvm evkalpgmgt tidvilingr lkegdtiivp gvegpivtqi
      901 rglllpppmk elrvknqyek hkeveaaqgv kilgkdlekt laglpllvay kedeipvlkd
      961 elihelkqtl naikleekgv yvqastlgsl ealleflkts evpyaginig pvhkkdvmka
     1021 svmlehdpqy avilafdvri erdaqemads lgvrifsaei iyhlfdaftk yrqdykkqkq
     1081 eefkhiavfp ckikilpqfi fnsrdpivmg vtveagqvkq gtpmcvpskn fvdigivtsi
     1141 evnhkqvdva kkgqevcvki epipgespkm ygrhfeatdi lvskisrqsi dalkdwfrde
     1201 mqksdwqliv elkkvfeii
//
LOCUS       XP_061011914            1218 aa            linear   MAM 02-DEC-2023
DEFINITION  eukaryotic translation initiation factor 5B isoform X2 [Dama dama].
ACCESSION   XP_061011914
VERSION     XP_061011914.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155931.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1218
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1218
                     /product="eukaryotic translation initiation factor 5B
                     isoform X2"
                     /calculated_mol_wt=138133
     Region          625..1200
                     /region_name="PRK04004"
                     /note="translation initiation factor IF-2; Validated;
                     cl44330"
                     /db_xref="CDD:457675"
     CDS             1..1218
                     /gene="EIF5B"
                     /coded_by="XM_061155931.1:176..3832"
                     /db_xref="GeneID:133065159"
ORIGIN      
        1 mgkkqknkse dsakddidld alaaeiegag aakeqepqka kgkkkkekkr qdfdeddilk
       61 eleelsweaq gikadrepaa vkptennede piskqdkkkk gqkgkkqsfe dndseeleek
      121 dlkskktakp kvemysgsdd dddfnklskk akgkaqksnk krdaseeded nskrikermr
      181 ahssgesgde sdeflqsrkg qkknqknkpg ptvesgnedd dssfkiktva qkkaekkere
      241 rkkrdeekak lrklkekeel esgkkdqgkp kefqrkleee pvkskvtlds gaapaseekg
      301 egptgaeddn egdkkkkdkk kkkgekeeke kekkkgpska tvkamqeala klkeeeerqk
      361 reeeerikrl eeleakrkee erleqekrer kkqkekerke rlkkegkllt ksqrearara
      421 eatlkllqaq gvevpskdsl pkkrpiyedk kkkkppqqme nkvsepvels atveaveqgg
      481 pekeetpppv epeeeeeted aglddweama sdeeretent vhievkenpe eeeeeeeeee
      541 eeeeseeeee degdsegseg eeddekvsde kdagktldkk pskdvssese ydsdddrtke
      601 eraydkakrr iekrrlehsk nvnteklrap vicvlghvdt gktkildklr hthvqdgeag
      661 gitqqigatn vpleaineqt kmiksfdren vripgmliid tpghesfsnl rnrgsslcdi
      721 ailvvdimhg lepqtiesin llkskkcpfi valnkidrly dwkkspdsdv aatlkkqkkn
      781 trdefeerak aiivefaqqg lnaalfyenk dprtfvslvp tsahtgdgmg slicllvelt
      841 qtmlskrlaq ceelraqvme vkalpgmgtt idvilingrl kegdtiivpg vegpivtqir
      901 glllpppmke lrvknqyekh keveaaqgvk ilgkdlektl aglpllvayk edeipvlkde
      961 lihelkqtln aikleekgvy vqastlgsle alleflktse vpyaginigp vhkkdvmkas
     1021 vmlehdpqya vilafdvrie rdaqemadsl gvrifsaeii yhlfdaftky rqdykkqkqe
     1081 efkhiavfpc kikilpqfif nsrdpivmgv tveagqvkqg tpmcvpsknf vdigivtsie
     1141 vnhkqvdvak kgqevcvkie pipgespkmy grhfeatdil vskisrqsid alkdwfrdem
     1201 qksdwqlive lkkvfeii
//
LOCUS       XP_061011915             226 aa            linear   MAM 02-DEC-2023
DEFINITION  thioredoxin domain-containing protein 9 [Dama dama].
ACCESSION   XP_061011915
VERSION     XP_061011915.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155932.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..226
                     /product="thioredoxin domain-containing protein 9"
                     /calculated_mol_wt=26341
     Region          68..180
                     /region_name="Phd_like_TxnDC9"
                     /note="Phosducin (Phd)-like family, Thioredoxin (TRX)
                     domain containing protein 9 (TxnDC9) subfamily; composed
                     of predominantly uncharacterized eukaryotic proteins,
                     containing a TRX-like domain without the redox active CXXC
                     motif. The gene name for the human...; cd02989"
                     /db_xref="CDD:239287"
     CDS             1..226
                     /gene="TXNDC9"
                     /coded_by="XM_061155932.1:184..864"
                     /db_xref="GeneID:133065160"
ORIGIN      
        1 meanasvdmf skvlenqllq ttklveehld seiqkldqmd edelerlkek rlealkkaqq
       61 qkqewlskgh geyreipser dffqevkesk kvvchfyrds tfrckildrh lvilskkhle
      121 tkflklnvek apflcerlri kviptlalvk dgktqdfvvg fsdlgntddf ttetlewrlg
      181 cadilnysgn lmeppfqsqk kfgtnftkle kktirgkkyd sdsddd
//
LOCUS       XP_061011916             226 aa            linear   MAM 02-DEC-2023
DEFINITION  thioredoxin domain-containing protein 9 [Dama dama].
ACCESSION   XP_061011916
VERSION     XP_061011916.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155933.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..226
                     /product="thioredoxin domain-containing protein 9"
                     /calculated_mol_wt=26341
     Region          68..180
                     /region_name="Phd_like_TxnDC9"
                     /note="Phosducin (Phd)-like family, Thioredoxin (TRX)
                     domain containing protein 9 (TxnDC9) subfamily; composed
                     of predominantly uncharacterized eukaryotic proteins,
                     containing a TRX-like domain without the redox active CXXC
                     motif. The gene name for the human...; cd02989"
                     /db_xref="CDD:239287"
     CDS             1..226
                     /gene="TXNDC9"
                     /coded_by="XM_061155933.1:228..908"
                     /db_xref="GeneID:133065160"
ORIGIN      
        1 meanasvdmf skvlenqllq ttklveehld seiqkldqmd edelerlkek rlealkkaqq
       61 qkqewlskgh geyreipser dffqevkesk kvvchfyrds tfrckildrh lvilskkhle
      121 tkflklnvek apflcerlri kviptlalvk dgktqdfvvg fsdlgntddf ttetlewrlg
      181 cadilnysgn lmeppfqsqk kfgtnftkle kktirgkkyd sdsddd
//
LOCUS       XP_061011917             161 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein uL30m [Dama dama].
ACCESSION   XP_061011917
VERSION     XP_061011917.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155934.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..161
                     /product="large ribosomal subunit protein uL30m"
                     /calculated_mol_wt=18425
     Region          67..119
                     /region_name="Ribosomal_L30"
                     /note="Ribosomal protein L30, which is found in eukaryotes
                     and prokaryotes but not in archaea, is one of the smallest
                     ribosomal proteins with a molecular mass of about 7kDa.
                     L30 binds the 23SrRNA as well as the 5S rRNA and is one of
                     five ribosomal proteins that...; cd01658"
                     /db_xref="CDD:100100"
     Site            order(73..74,76..77,79..81,84..85,88..90,92,95,100..101,
                     104..106,108..109)
                     /site_type="other"
                     /note="23S rRNA binding site [nucleotide binding]"
                     /db_xref="CDD:100100"
     CDS             1..161
                     /gene="MRPL30"
                     /coded_by="XM_061155934.1:325..810"
                     /db_xref="GeneID:133065162"
ORIGIN      
        1 magilrsivq rppgrlqtat kgveplictd wirhkftrsr ipdevfwpsp edhekyggdp
       61 qqphklhivt rikstrrrpy wekdiikmlg lqkahtpqvh knipsvnakl kvvkhlirik
      121 plklpqglpt eedmsntclk stgelvvrwl lnpadqeakk c
//
LOCUS       XP_061011918             161 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein uL30m [Dama dama].
ACCESSION   XP_061011918
VERSION     XP_061011918.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155935.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..161
                     /product="large ribosomal subunit protein uL30m"
                     /calculated_mol_wt=18425
     Region          67..119
                     /region_name="Ribosomal_L30"
                     /note="Ribosomal protein L30, which is found in eukaryotes
                     and prokaryotes but not in archaea, is one of the smallest
                     ribosomal proteins with a molecular mass of about 7kDa.
                     L30 binds the 23SrRNA as well as the 5S rRNA and is one of
                     five ribosomal proteins that...; cd01658"
                     /db_xref="CDD:100100"
     Site            order(73..74,76..77,79..81,84..85,88..90,92,95,100..101,
                     104..106,108..109)
                     /site_type="other"
                     /note="23S rRNA binding site [nucleotide binding]"
                     /db_xref="CDD:100100"
     CDS             1..161
                     /gene="MRPL30"
                     /coded_by="XM_061155935.1:150..635"
                     /db_xref="GeneID:133065162"
ORIGIN      
        1 magilrsivq rppgrlqtat kgveplictd wirhkftrsr ipdevfwpsp edhekyggdp
       61 qqphklhivt rikstrrrpy wekdiikmlg lqkahtpqvh knipsvnakl kvvkhlirik
      121 plklpqglpt eedmsntclk stgelvvrwl lnpadqeakk c
//
LOCUS       XP_061011919             249 aa            linear   MAM 02-DEC-2023
DEFINITION  MIT domain-containing protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061011919
VERSION     XP_061011919.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155936.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..249
                     /product="MIT domain-containing protein 1 isoform X1"
                     /calculated_mol_wt=28985
     Region          10..86
                     /region_name="MIT_1"
                     /note="MIT: domain contained within Microtubule
                     Interacting and Trafficking molecules. This sub-family of
                     MIT domains is found in proteins with unknown function,
                     co-occuring with an as yet undescribed domain. The
                     molecular function of the MIT domain is unclear; cd02683"
                     /db_xref="CDD:239146"
     Region          97..245
                     /region_name="MIT_C"
                     /note="domain found C-terminal to MIT (contained within
                     Microtubule Interacting and Trafficking molecules)
                     domains, as well as in some bacterial proteins. The
                     function of this domain is unknown; cd02685"
                     /db_xref="CDD:239148"
     CDS             1..249
                     /gene="MITD1"
                     /coded_by="XM_061155936.1:60..809"
                     /db_xref="GeneID:133065163"
ORIGIN      
        1 marsglaqda gstaavtvik ralelesesr ypqalvcyqe gidlllqvlk gtkdetkrcn
       61 lrkrisdymd raehikkyld qekeagkyhk qikieenatg fsyeslfqey lsetvtevwi
      121 edpyirqthq lynflrfcem lvkrpckvrt ihlltsldeg tgkeqqssgl eeikqslrnh
      181 gvhleleyss sihdreirfn ngwmikigrg ldyfkkpqsr fslgycdfdl rpchettvdi
      241 fhnkhtkki
//
LOCUS       XP_061011920             237 aa            linear   MAM 02-DEC-2023
DEFINITION  MIT domain-containing protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061011920
VERSION     XP_061011920.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155937.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..237
                     /product="MIT domain-containing protein 1 isoform X2"
                     /calculated_mol_wt=27606
     Region          10..86
                     /region_name="MIT_1"
                     /note="MIT: domain contained within Microtubule
                     Interacting and Trafficking molecules. This sub-family of
                     MIT domains is found in proteins with unknown function,
                     co-occuring with an as yet undescribed domain. The
                     molecular function of the MIT domain is unclear; cd02683"
                     /db_xref="CDD:239146"
     Region          97..233
                     /region_name="MIT_C"
                     /note="domain found C-terminal to MIT (contained within
                     Microtubule Interacting and Trafficking molecules)
                     domains, as well as in some bacterial proteins. The
                     function of this domain is unknown; cd02685"
                     /db_xref="CDD:239148"
     CDS             1..237
                     /gene="MITD1"
                     /coded_by="XM_061155937.1:62..775"
                     /db_xref="GeneID:133065163"
ORIGIN      
        1 marsglaqda gstaavtvik ralelesesr ypqalvcyqe gidlllqvlk gtkdetkrcn
       61 lrkrisdymd raehikkyld qekeagkyhk qikieenatg fsyeslfqey lsetvtevwi
      121 edpyirqthq lynflrfcem lvkrpckgtg keqqssglee ikqslrnhgv hleleysssi
      181 hdreirfnng wmikigrgld yfkkpqsrfs lgycdfdlrp chettvdifh nkhtkki
//
LOCUS       XP_061011921             430 aa            linear   MAM 02-DEC-2023
DEFINITION  lipoyltransferase 1, mitochondrial isoform X1 [Dama dama].
ACCESSION   XP_061011921
VERSION     XP_061011921.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155938.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..430
                     /product="lipoyltransferase 1, mitochondrial isoform X1"
                     /calculated_mol_wt=48553
     Region          90..292
                     /region_name="LplA"
                     /note="lipoate-protein ligase; cd16443"
                     /db_xref="CDD:319742"
     Site            order(123,156,161..165,169,171,208,218..222,234..236,238)
                     /site_type="active"
                     /db_xref="CDD:319742"
     CDS             1..430
                     /gene="LIPT1"
                     /coded_by="XM_061155938.1:276..1568"
                     /db_xref="GeneID:133065164"
ORIGIN      
        1 mgscqhshrc kwswktgsgt pwgespqgpp ycwrtvclpg icyshqrgkk hqmsrlsmli
       61 pfsmkncfql lcnlkvpaag fkntvksgli lqsisndvyh nlavedwihd hmnlegkpvl
      121 flwrnspsvv igrhqnpwqe cnlnlmreeg vklarrrsgg gtvyhdmgni nltffttkkk
      181 ydrmenlklv vralkavqph ldvqaterfd llldgqfkis gtaskigrna ayhhctllcs
      241 tdgtflssll kspyqgirsn atastpalvr nlmekdptlt cevvinavat eyaashqidn
      301 hihlinptde tvfpginska relqtwewiy gktpkfsidt sftvlheqah leikvfidvk
      361 ngrievcnie apdhwlplei cdqlnssfig skfcpiettv ltsilhrtyp gddelhskwn
      421 ilcekikgim
//
LOCUS       XP_061011922             401 aa            linear   MAM 02-DEC-2023
DEFINITION  lipoyltransferase 1, mitochondrial isoform X2 [Dama dama].
ACCESSION   XP_061011922
VERSION     XP_061011922.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155939.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..401
                     /product="lipoyltransferase 1, mitochondrial isoform X2"
                     /calculated_mol_wt=44763
     Region          61..263
                     /region_name="LplA"
                     /note="lipoate-protein ligase; cd16443"
                     /db_xref="CDD:319742"
     Site            order(94,127,132..136,140,142,179,189..193,205..207,209)
                     /site_type="active"
                     /db_xref="CDD:319742"
     CDS             1..401
                     /gene="LIPT1"
                     /coded_by="XM_061155939.1:16..1221"
                     /db_xref="GeneID:133065164"
ORIGIN      
        1 mrsrpgsgsh aylahgparg vgatgscsml ipfsmkncfq llcnlkvpaa gfkntvksgl
       61 ilqsisndvy hnlavedwih dhmnlegkpv lflwrnspsv vigrhqnpwq ecnlnlmree
      121 gvklarrrsg ggtvyhdmgn inltffttkk kydrmenlkl vvralkavqp hldvqaterf
      181 dllldgqfki sgtaskigrn aayhhctllc stdgtflssl lkspyqgirs natastpalv
      241 rnlmekdptl tcevvinava teyaashqid nhihlinptd etvfpginsk arelqtwewi
      301 ygktpkfsid tsftvlheqa hleikvfidv kngrievcni eapdhwlple icdqlnssfi
      361 gskfcpiett vltsilhrty pgddelhskw nilcekikgi m
//
LOCUS       XP_061011923             373 aa            linear   MAM 02-DEC-2023
DEFINITION  lipoyltransferase 1, mitochondrial isoform X3 [Dama dama].
ACCESSION   XP_061011923
VERSION     XP_061011923.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155940.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..373
                     /product="lipoyltransferase 1, mitochondrial isoform X3"
                     /calculated_mol_wt=42053
     Region          33..235
                     /region_name="LplA"
                     /note="lipoate-protein ligase; cd16443"
                     /db_xref="CDD:319742"
     Site            order(66,99,104..108,112,114,151,161..165,177..179,181)
                     /site_type="active"
                     /db_xref="CDD:319742"
     CDS             1..373
                     /gene="LIPT1"
                     /coded_by="XM_061155940.1:305..1426"
                     /db_xref="GeneID:133065164"
ORIGIN      
        1 mlipfsmknc fqllcnlkvp aagfkntvks glilqsisnd vyhnlavedw ihdhmnlegk
       61 pvlflwrnsp svvigrhqnp wqecnlnlmr eegvklarrr sgggtvyhdm gninltfftt
      121 kkkydrmenl klvvralkav qphldvqate rfdllldgqf kisgtaskig rnaayhhctl
      181 lcstdgtfls sllkspyqgi rsnatastpa lvrnlmekdp tltcevvina vateyaashq
      241 idnhihlinp tdetvfpgin skarelqtwe wiygktpkfs idtsftvlhe qahleikvfi
      301 dvkngrievc nieapdhwlp leicdqlnss figskfcpie ttvltsilhr typgddelhs
      361 kwnilcekik gim
//
LOCUS       XP_061011924             373 aa            linear   MAM 02-DEC-2023
DEFINITION  lipoyltransferase 1, mitochondrial isoform X3 [Dama dama].
ACCESSION   XP_061011924
VERSION     XP_061011924.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155941.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..373
                     /product="lipoyltransferase 1, mitochondrial isoform X3"
                     /calculated_mol_wt=42053
     Region          33..235
                     /region_name="LplA"
                     /note="lipoate-protein ligase; cd16443"
                     /db_xref="CDD:319742"
     Site            order(66,99,104..108,112,114,151,161..165,177..179,181)
                     /site_type="active"
                     /db_xref="CDD:319742"
     CDS             1..373
                     /gene="LIPT1"
                     /coded_by="XM_061155941.1:452..1573"
                     /db_xref="GeneID:133065164"
ORIGIN      
        1 mlipfsmknc fqllcnlkvp aagfkntvks glilqsisnd vyhnlavedw ihdhmnlegk
       61 pvlflwrnsp svvigrhqnp wqecnlnlmr eegvklarrr sgggtvyhdm gninltfftt
      121 kkkydrmenl klvvralkav qphldvqate rfdllldgqf kisgtaskig rnaayhhctl
      181 lcstdgtfls sllkspyqgi rsnatastpa lvrnlmekdp tltcevvina vateyaashq
      241 idnhihlinp tdetvfpgin skarelqtwe wiygktpkfs idtsftvlhe qahleikvfi
      301 dvkngrievc nieapdhwlp leicdqlnss figskfcpie ttvltsilhr typgddelhs
      361 kwnilcekik gim
//
LOCUS       XP_061011925             901 aa            linear   MAM 02-DEC-2023
DEFINITION  testis-specific gene 10 protein isoform X1 [Dama dama].
ACCESSION   XP_061011925
VERSION     XP_061011925.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155942.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..901
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..901
                     /product="testis-specific gene 10 protein isoform X1"
                     /calculated_mol_wt=104337
     Region          <45..451
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <320..>884
                     /region_name="CCDC158"
                     /note="Coiled-coil domain-containing protein 158;
                     pfam15921"
                     /db_xref="CDD:464943"
     CDS             1..901
                     /gene="TSGA10"
                     /coded_by="XM_061155942.1:921..3626"
                     /db_xref="GeneID:133065165"
ORIGIN      
        1 mgacsvvsns fqlvncslpg ssvhgisqvt tkehdfglga pvseaekyqn ilqleqevrn
       61 qdkfistlkl qiedlkqtnh gleeyvkkll dskevvssqv ddltshnehl cqelikidql
      121 aeqlekeknf vvdtadkele eakielicqq nnikvledti krlrsiilet ekaqnkspsr
      181 ldsfvktlea drdyykseaq nlrrmirsrs ksprrpspss rgtncdvell kttrdreelk
      241 cmlekyerhl aeiqgnvkvl tserdktfll yeqaqeeiar lrremmksck spksttahai
      301 lrrveterdv aftdlrrmtt erdslrerlk iaqetafnek ahleqrieel ectvhnldde
      361 rmeqmsnmtl mketittvek emkslarkam dteselgrqk aennslrlly entekdlsdt
      421 qrhlakkkye lqltqekimc ldekidnftr qsiaqreeis ilgatlndla kekeclqacl
      481 dkkseniasl geslamkekt isgmkniiae meqasrqste alimceqdis rmrrqldetn
      541 delaqiarer dilahendnl qeqfakakqe nqalskklnd thnelsdikq kvqdtnlevn
      601 klknilksee senrqmmdql rkanedaenw enkarqaead nntlklelit aeaegnrlke
      661 kvdalnreve qhlnaersyk sqiatlhksv vkmeeelqkv qfekvsalad lsstrelcik
      721 ldsskellnr qlvakdqeie mmeneldsar seiellrsqm tnerismqnl eallvanrdk
      781 eyqsqialqe keseiqllke hlclaenkma iqsrdvaqfr nvvtqleadl ditkrqlgte
      841 rfereravqe lrrqnyssna yhlsstikpn tkchsperth hrspdrgldr sleenlcyrd
      901 f
//
LOCUS       XP_061011926             892 aa            linear   MAM 02-DEC-2023
DEFINITION  testis-specific gene 10 protein isoform X2 [Dama dama].
ACCESSION   XP_061011926
VERSION     XP_061011926.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155943.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..892
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..892
                     /product="testis-specific gene 10 protein isoform X2"
                     /calculated_mol_wt=103450
     Region          <36..442
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <311..>875
                     /region_name="CCDC158"
                     /note="Coiled-coil domain-containing protein 158;
                     pfam15921"
                     /db_xref="CDD:464943"
     CDS             1..892
                     /gene="TSGA10"
                     /coded_by="XM_061155943.1:61..2739"
                     /db_xref="GeneID:133065165"
ORIGIN      
        1 misgedggpk spgrdpppqv ttkehdfglg apvseaekyq nilqleqevr nqdkfistlk
       61 lqiedlkqtn hgleeyvkkl ldskevvssq vddltshneh lcqelikidq laeqlekekn
      121 fvvdtadkel eeakielicq qnnikvledt ikrlrsiile tekaqnksps rldsfvktle
      181 adrdyyksea qnlrrmirsr sksprrpsps srgtncdvel lkttrdreel kcmlekyerh
      241 laeiqgnvkv ltserdktfl lyeqaqeeia rlrremmksc kspksttaha ilrrveterd
      301 vaftdlrrmt terdslrerl kiaqetafne kahleqriee lectvhnldd ermeqmsnmt
      361 lmketittve kemkslarka mdteselgrq kaennslrll yentekdlsd tqrhlakkky
      421 elqltqekim cldekidnft rqsiaqreei silgatlndl akekeclqac ldkksenias
      481 lgeslamkek tisgmkniia emeqasrqst ealimceqdi srmrrqldet ndelaqiare
      541 rdilahendn lqeqfakakq enqalskkln dthnelsdik qkvqdtnlev nklknilkse
      601 esenrqmmdq lrkanedaen wenkarqaea dnntlkleli taeaegnrlk ekvdalnrev
      661 eqhlnaersy ksqiatlhks vvkmeeelqk vqfekvsala dlsstrelci kldsskelln
      721 rqlvakdqei emmeneldsa rseiellrsq mtnerismqn leallvanrd keyqsqialq
      781 ekeseiqllk ehlclaenkm aiqsrdvaqf rnvvtqlead lditkrqlgt erfereravq
      841 elrrqnyssn ayhlsstikp ntkchspert hhrspdrgld rsleenlcyr df
//
LOCUS       XP_061011927             697 aa            linear   MAM 02-DEC-2023
DEFINITION  testis-specific gene 10 protein isoform X3 [Dama dama].
ACCESSION   XP_061011927
VERSION     XP_061011927.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155944.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..697
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..697
                     /product="testis-specific gene 10 protein isoform X3"
                     /calculated_mol_wt=81108
     Region          <134..466
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          329..>648
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..697
                     /gene="TSGA10"
                     /coded_by="XM_061155944.1:611..2704"
                     /db_xref="GeneID:133065165"
ORIGIN      
        1 mirsrskspr rpspssrgtn cdvellkttr dreelkcmle kyerhlaeiq gnvkvltser
       61 dktfllyeqa qeeiarlrre mmksckspks ttahailrrv eterdvaftd lrrmtterds
      121 lrerlkiaqe tafnekahle qrieelectv hnlddermeq msnmtlmket ittvekemks
      181 larkamdtes elgrqkaenn slrllyente kdlsdtqrhl akkkyelqlt qekimcldek
      241 idnftrqsia qreeisilga tlndlakeke clqacldkks eniaslgesl amkektisgm
      301 kniiaemeqa srqstealim ceqdisrmrr qldetndela qiarerdila hendnlqeqf
      361 akakqenqal skklndthne lsdikqkvqd tnlevnklkn ilkseesenr qmmdqlrkan
      421 edaenwenka rqaeadnntl klelitaeae gnrlkekvda lnreveqhln aersyksqia
      481 tlhksvvkme eelqkvqfek vsaladlsst relcikldss kellnrqlva kdqeiemmen
      541 eldsarseie llrsqmtner ismqnleall vanrdkeyqs qialqekese iqllkehlcl
      601 aenkmaiqsr dvaqfrnvvt qleadlditk rqlgterfer eravqelrrq nyssnayhls
      661 stikpntkch sperthhrsp drgldrslee nlcyrdf
//
LOCUS       XP_061011928             697 aa            linear   MAM 02-DEC-2023
DEFINITION  testis-specific gene 10 protein isoform X3 [Dama dama].
ACCESSION   XP_061011928
VERSION     XP_061011928.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155945.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..697
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..697
                     /product="testis-specific gene 10 protein isoform X3"
                     /calculated_mol_wt=81108
     Region          <134..466
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          329..>648
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..697
                     /gene="TSGA10"
                     /coded_by="XM_061155945.1:212..2305"
                     /db_xref="GeneID:133065165"
ORIGIN      
        1 mirsrskspr rpspssrgtn cdvellkttr dreelkcmle kyerhlaeiq gnvkvltser
       61 dktfllyeqa qeeiarlrre mmksckspks ttahailrrv eterdvaftd lrrmtterds
      121 lrerlkiaqe tafnekahle qrieelectv hnlddermeq msnmtlmket ittvekemks
      181 larkamdtes elgrqkaenn slrllyente kdlsdtqrhl akkkyelqlt qekimcldek
      241 idnftrqsia qreeisilga tlndlakeke clqacldkks eniaslgesl amkektisgm
      301 kniiaemeqa srqstealim ceqdisrmrr qldetndela qiarerdila hendnlqeqf
      361 akakqenqal skklndthne lsdikqkvqd tnlevnklkn ilkseesenr qmmdqlrkan
      421 edaenwenka rqaeadnntl klelitaeae gnrlkekvda lnreveqhln aersyksqia
      481 tlhksvvkme eelqkvqfek vsaladlsst relcikldss kellnrqlva kdqeiemmen
      541 eldsarseie llrsqmtner ismqnleall vanrdkeyqs qialqekese iqllkehlcl
      601 aenkmaiqsr dvaqfrnvvt qleadlditk rqlgterfer eravqelrrq nyssnayhls
      661 stikpntkch sperthhrsp drgldrslee nlcyrdf
//
LOCUS       XP_061011929             697 aa            linear   MAM 02-DEC-2023
DEFINITION  testis-specific gene 10 protein isoform X3 [Dama dama].
ACCESSION   XP_061011929
VERSION     XP_061011929.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155946.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..697
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..697
                     /product="testis-specific gene 10 protein isoform X3"
                     /calculated_mol_wt=81108
     Region          <134..466
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          329..>648
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..697
                     /gene="TSGA10"
                     /coded_by="XM_061155946.1:179..2272"
                     /db_xref="GeneID:133065165"
ORIGIN      
        1 mirsrskspr rpspssrgtn cdvellkttr dreelkcmle kyerhlaeiq gnvkvltser
       61 dktfllyeqa qeeiarlrre mmksckspks ttahailrrv eterdvaftd lrrmtterds
      121 lrerlkiaqe tafnekahle qrieelectv hnlddermeq msnmtlmket ittvekemks
      181 larkamdtes elgrqkaenn slrllyente kdlsdtqrhl akkkyelqlt qekimcldek
      241 idnftrqsia qreeisilga tlndlakeke clqacldkks eniaslgesl amkektisgm
      301 kniiaemeqa srqstealim ceqdisrmrr qldetndela qiarerdila hendnlqeqf
      361 akakqenqal skklndthne lsdikqkvqd tnlevnklkn ilkseesenr qmmdqlrkan
      421 edaenwenka rqaeadnntl klelitaeae gnrlkekvda lnreveqhln aersyksqia
      481 tlhksvvkme eelqkvqfek vsaladlsst relcikldss kellnrqlva kdqeiemmen
      541 eldsarseie llrsqmtner ismqnleall vanrdkeyqs qialqekese iqllkehlcl
      601 aenkmaiqsr dvaqfrnvvt qleadlditk rqlgterfer eravqelrrq nyssnayhls
      661 stikpntkch sperthhrsp drgldrslee nlcyrdf
//
LOCUS       XP_061011930            1018 aa            linear   MAM 02-DEC-2023
DEFINITION  CRACD-like protein isoform X1 [Dama dama].
ACCESSION   XP_061011930
VERSION     XP_061011930.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155947.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1018
                     /product="CRACD-like protein isoform X1"
                     /calculated_mol_wt=108108
     Region          229..338
                     /region_name="DUF4592"
                     /note="Domain of unknown function (DUF4592); pfam15262"
                     /db_xref="CDD:464602"
     Region          427..>862
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..1018
                     /gene="CRACDL"
                     /coded_by="XM_061155947.1:271..3327"
                     /db_xref="GeneID:133065167"
ORIGIN      
        1 mpcaphlpgg ptglqelvda svssgpeccs gngskaldrh pgvtrgplwg rggllsfrrm
       61 kvpeapsvft kmaafyqcik pepseldmis trvmdiklre aaeglgedst gkkkskfktf
      121 kkffgkkkrk esssstgsst wkqsqaknev maiesgpvgy dsedeledsr gtlgsralsh
      181 dsifipesgq dpprplrvfs qenvcdrika lqlkiqcnvk mgpppppgsl ptkrgddagm
      241 sseddglprs ppemsllhdi gsgttikvcv vsssrpqspd qlfsrqvset stsprtsdss
      301 mvpvadfdyp pefsscldns aakhkllvkp rnqrsskmrr lssraqsesl sdltctpeee
      361 eddekpllqv skeeppssgq qeagqdggse pegpatvlpp agprlrrarl qhcpaltast
      421 eeesppgenp sshpatpegt peatleatpe atlevmevte plsgsaphse spsrpegsph
      481 pnpdnenqre dvslesacpp ggdtadeavc asgdnvqgrl stlppegdtt ppepgpaatp
      541 etppgpdgtd ragqketlpt ldlpapegag pespaaapsp pppksclkhk apsppaseap
      601 pqvpaprspe qgaaprgppk aeragsplga perkterggc easgaakkfs vssgrewpra
      661 ggrlleprgp avrlpllrsg pawkseaald dlpaapepqg pkpgprkspa paergsadta
      721 hpaaqeraag geggpfpvkl rstslsfkhr eapcpegkai krysaevrle rgglsllsrd
      781 dkgppgsgps trgarppsep gkaktrpteq lsskpplprk pllqtltlpq lpappdtssg
      841 dpekvglpme prkesraerr sphratekva gpgtngqptp pwipvgrqkr rgpleqppsq
      901 edkpartlks dtgrpakape rtqepvkqad fvrsksflmt pakppvdqrq gtklrlqegl
      961 qrgislshqn laaqsaamme kelhqlkras ygstdqpswm elarkksqaw sdmpqiik
//
LOCUS       XP_061011931            1017 aa            linear   MAM 02-DEC-2023
DEFINITION  CRACD-like protein isoform X2 [Dama dama].
ACCESSION   XP_061011931
VERSION     XP_061011931.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155948.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1017
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1017
                     /product="CRACD-like protein isoform X2"
                     /calculated_mol_wt=108036
     Region          229..338
                     /region_name="DUF4592"
                     /note="Domain of unknown function (DUF4592); pfam15262"
                     /db_xref="CDD:464602"
     Region          427..>862
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..1017
                     /gene="CRACDL"
                     /coded_by="XM_061155948.1:274..3327"
                     /db_xref="GeneID:133065167"
ORIGIN      
        1 mpcaphlpgg ptglqelvda svssgpeccs gngskaldrh pgvtrgplwg rggllsfrrm
       61 kvpeapsvft kmaafyqcik pepseldmis trvmdiklre aaeglgedst gkkkskfktf
      121 kkffgkkkrk esssstgsst wkqsqaknev maiesgpvgy dsedeledsr gtlgsralsh
      181 dsifipesgq dpprplrvfs qenvcdrika lqlkiqcnvk mgpppppgsl ptkrgddagm
      241 sseddglprs ppemsllhdi gsgttikvcv vsssrpqspd qlfsrqvset stsprtsdss
      301 mvpvadfdyp pefsscldns aakhkllvkp rnqrsskmrr lssraqsesl sdltctpeee
      361 eddekpllqv skeeppssgq qeagqdggse pegpatvlpp agprlrrarl qhcpaltast
      421 eeesppgenp sshpatpegt peatleatpe atlevmevte plsgsaphse spsrpegsph
      481 pnpdnenqre dvslesacpp ggdtadeavc asgdnvqgrl stlppegdtt ppepgpaatp
      541 etppgpdgtd ragqketlpt ldlpapegag pespaaapsp pppksclkhk apsppaseap
      601 pqvpaprspe qgaaprgppk aeragsplga perkterggc easgaakkfs vssgrewpra
      661 ggrlleprgp avrlpllrsg pawkseaald dlpaapepqg pkpgprkspa paergsadta
      721 hpaaqeraag geggpfpvkl rstslsfkhr eapcpegkai krysaevrle rgglsllsrd
      781 dkgppgsgps trgarppsep gkaktrpteq lsskpplprk pllqtltlpq lpappdtssg
      841 dpekvglpme prkesraerr sphratekva gpgtngqptp pwipvgrqkr rgpleqppsq
      901 edkpartlks dtgrpakape rtqepvkqad fvrsksflmt pakppvdqrq gtklrlqegl
      961 qrgislshqn laqsaammek elhqlkrasy gstdqpswme larkksqaws dmpqiik
//
LOCUS       XP_061011932             535 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-1,3-mannosyl-glycoprotein
            4-beta-N-acetylglucosaminyltransferase A [Dama dama].
ACCESSION   XP_061011932
VERSION     XP_061011932.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155949.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..535
                     /product="alpha-1,3-mannosyl-glycoprotein
                     4-beta-N-acetylglucosaminyltransferase A"
                     /calculated_mol_wt=61493
     Region          103..380
                     /region_name="Glyco_transf_54"
                     /note="N-Acetylglucosaminyltransferase-IV (GnT-IV)
                     conserved region; pfam04666"
                     /db_xref="CDD:461384"
     Region          287..311
                     /region_name="putative TM2 helix"
                     /note="putative TM2 helix [structural motif]"
                     /db_xref="CDD:409189"
     CDS             1..535
                     /gene="MGAT4A"
                     /coded_by="XM_061155949.1:351..1958"
                     /db_xref="GeneID:133065172"
ORIGIN      
        1 mrlrngtvat vlafitsflt lswyttwqng kekviayqre flalkerlri aehrisqrss
       61 elsaivqqfk rveaetnrsk dtvnkfsddt lkilkeltsr kslqvpsvyh hlphllqneg
      121 slqpavqign grtgvsivmg iptvkrevks ylietlhsli dnlypeekld cvivvfiget
      181 dtdyvnsvva nlekefskei ssglveiisp pesyypdltn lketfgdske rvrwrtkqnl
      241 dycflmmyaq ekgtyyiqle ddiivkqnyf ntiknfalql sseewmilef sqlgfigkmf
      301 qapdltlive fifmfykekp idwlldhilw vkvcnpekda khcdrqkanl rirfrpslfq
      361 hvglhssltg kiqkltdkdy mkplllkihv nppaevstsl kvyqghtlek tymgedffwa
      421 itpvagdyil fkfdkpvnve sylfhsgnqe hpgdillntt vdvlplkseg leisketkdk
      481 rledgyfrig kfvngvaegm vdpslnpisa frlsviqnsa vwailneihi kkvtn
//
LOCUS       XP_061011933             535 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-1,3-mannosyl-glycoprotein
            4-beta-N-acetylglucosaminyltransferase A [Dama dama].
ACCESSION   XP_061011933
VERSION     XP_061011933.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155950.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..535
                     /product="alpha-1,3-mannosyl-glycoprotein
                     4-beta-N-acetylglucosaminyltransferase A"
                     /calculated_mol_wt=61493
     Region          103..380
                     /region_name="Glyco_transf_54"
                     /note="N-Acetylglucosaminyltransferase-IV (GnT-IV)
                     conserved region; pfam04666"
                     /db_xref="CDD:461384"
     Region          287..311
                     /region_name="putative TM2 helix"
                     /note="putative TM2 helix [structural motif]"
                     /db_xref="CDD:409189"
     CDS             1..535
                     /gene="MGAT4A"
                     /coded_by="XM_061155950.1:299..1906"
                     /db_xref="GeneID:133065172"
ORIGIN      
        1 mrlrngtvat vlafitsflt lswyttwqng kekviayqre flalkerlri aehrisqrss
       61 elsaivqqfk rveaetnrsk dtvnkfsddt lkilkeltsr kslqvpsvyh hlphllqneg
      121 slqpavqign grtgvsivmg iptvkrevks ylietlhsli dnlypeekld cvivvfiget
      181 dtdyvnsvva nlekefskei ssglveiisp pesyypdltn lketfgdske rvrwrtkqnl
      241 dycflmmyaq ekgtyyiqle ddiivkqnyf ntiknfalql sseewmilef sqlgfigkmf
      301 qapdltlive fifmfykekp idwlldhilw vkvcnpekda khcdrqkanl rirfrpslfq
      361 hvglhssltg kiqkltdkdy mkplllkihv nppaevstsl kvyqghtlek tymgedffwa
      421 itpvagdyil fkfdkpvnve sylfhsgnqe hpgdillntt vdvlplkseg leisketkdk
      481 rledgyfrig kfvngvaegm vdpslnpisa frlsviqnsa vwailneihi kkvtn
//
LOCUS       XP_061011934             261 aa            linear   MAM 02-DEC-2023
DEFINITION  protein unc-50 homolog isoform X1 [Dama dama].
ACCESSION   XP_061011934
VERSION     XP_061011934.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155951.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..261
                     /product="protein unc-50 homolog isoform X1"
                     /calculated_mol_wt=30438
     Region          36..257
                     /region_name="UNC-50"
                     /note="UNC-50 family; pfam05216"
                     /db_xref="CDD:461592"
     CDS             1..261
                     /gene="UNC50"
                     /coded_by="XM_061155951.1:203..988"
                     /db_xref="GeneID:133065173"
ORIGIN      
        1 mkmlpstsvn spaqgngvls srdaarhtag akrykylrrl frfrqmdfef aawqmlylft
       61 spqrvyrnfh yrkqtkdqwa rddpaflvll siwlcvstig fgfvldmgff etiklllwvv
      121 fidcvgvgll istlmwfisn kylvkrqsrd ydvewgyafd vhlnafypll vilhfiqlff
      181 inhviltdtf igylvgntlw lvavgyyiyv tflgysalpf lkntvtllyp faplillygl
      241 slalgwnfth alcsfykyrv k
//
LOCUS       XP_061011935             259 aa            linear   MAM 02-DEC-2023
DEFINITION  protein unc-50 homolog isoform X2 [Dama dama].
ACCESSION   XP_061011935
VERSION     XP_061011935.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155952.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..259
                     /product="protein unc-50 homolog isoform X2"
                     /calculated_mol_wt=30179
     Region          34..255
                     /region_name="UNC-50"
                     /note="UNC-50 family; pfam05216"
                     /db_xref="CDD:461592"
     CDS             1..259
                     /gene="UNC50"
                     /coded_by="XM_061155952.1:160..939"
                     /db_xref="GeneID:133065173"
ORIGIN      
        1 mlpstsvnsp aqgngvlssr daarhtagak rykylrrlfr frqmdfefaa wqmlylftsp
       61 qrvyrnfhyr kqtkdqward dpaflvllsi wlcvstigfg fvldmgffet iklllwvvfi
      121 dcvgvgllis tlmwfisnky lvkrqsrdyd vewgyafdvh lnafypllvi lhfiqlffin
      181 hviltdtfig ylvgntlwlv avgyyiyvtf lgysalpflk ntvtllypfa plillyglsl
      241 algwnfthal csfykyrvk
//
LOCUS       XP_061011936             259 aa            linear   MAM 02-DEC-2023
DEFINITION  protein unc-50 homolog isoform X2 [Dama dama].
ACCESSION   XP_061011936
VERSION     XP_061011936.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155953.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..259
                     /product="protein unc-50 homolog isoform X2"
                     /calculated_mol_wt=30179
     Region          34..255
                     /region_name="UNC-50"
                     /note="UNC-50 family; pfam05216"
                     /db_xref="CDD:461592"
     CDS             1..259
                     /gene="UNC50"
                     /coded_by="XM_061155953.1:143..922"
                     /db_xref="GeneID:133065173"
ORIGIN      
        1 mlpstsvnsp aqgngvlssr daarhtagak rykylrrlfr frqmdfefaa wqmlylftsp
       61 qrvyrnfhyr kqtkdqward dpaflvllsi wlcvstigfg fvldmgffet iklllwvvfi
      121 dcvgvgllis tlmwfisnky lvkrqsrdyd vewgyafdvh lnafypllvi lhfiqlffin
      181 hviltdtfig ylvgntlwlv avgyyiyvtf lgysalpflk ntvtllypfa plillyglsl
      241 algwnfthal csfykyrvk
//
LOCUS       XP_061011937             259 aa            linear   MAM 02-DEC-2023
DEFINITION  protein unc-50 homolog isoform X2 [Dama dama].
ACCESSION   XP_061011937
VERSION     XP_061011937.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155954.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..259
                     /product="protein unc-50 homolog isoform X2"
                     /calculated_mol_wt=30179
     Region          34..255
                     /region_name="UNC-50"
                     /note="UNC-50 family; pfam05216"
                     /db_xref="CDD:461592"
     CDS             1..259
                     /gene="UNC50"
                     /coded_by="XM_061155954.1:168..947"
                     /db_xref="GeneID:133065173"
ORIGIN      
        1 mlpstsvnsp aqgngvlssr daarhtagak rykylrrlfr frqmdfefaa wqmlylftsp
       61 qrvyrnfhyr kqtkdqward dpaflvllsi wlcvstigfg fvldmgffet iklllwvvfi
      121 dcvgvgllis tlmwfisnky lvkrqsrdyd vewgyafdvh lnafypllvi lhfiqlffin
      181 hviltdtfig ylvgntlwlv avgyyiyvtf lgysalpflk ntvtllypfa plillyglsl
      241 algwnfthal csfykyrvk
//
LOCUS       XP_061011938              74 aa            linear   MAM 02-DEC-2023
DEFINITION  cytochrome c oxidase assembly factor 5 [Dama dama].
ACCESSION   XP_061011938
VERSION     XP_061011938.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155955.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..74
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..74
                     /product="cytochrome c oxidase assembly factor 5"
                     /calculated_mol_wt=8272
     Region          11..71
                     /region_name="Pet191_N"
                     /note="Cytochrome c oxidase assembly protein PET191;
                     pfam10203"
                     /db_xref="CDD:402002"
     CDS             1..74
                     /gene="LOC133065174"
                     /coded_by="XM_061155955.1:103..327"
                     /db_xref="GeneID:133065174"
ORIGIN      
        1 mpryyedkpe ggacagvked lgvcllqsdc vlkegksprq clkegnckal kysffeckrs
       61 mldarsrfrg rkgy
//
LOCUS       XP_061011939             986 aa            linear   MAM 02-DEC-2023
DEFINITION  inositol polyphosphate-4-phosphatase type I A isoform X1 [Dama
            dama].
ACCESSION   XP_061011939
VERSION     XP_061011939.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155956.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..986
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..986
                     /product="inositol polyphosphate-4-phosphatase type I A
                     isoform X1"
                     /calculated_mol_wt=110352
     Region          44..157
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     CDS             1..986
                     /gene="INPP4A"
                     /coded_by="XM_061155956.1:259..3219"
                     /db_xref="GeneID:133065176"
ORIGIN      
        1 mtarehsprh gararamqra stidvagdml glslagnvqd pdepilefsl acselhtpsl
       61 drkpnsfvav svttppqafw tkhaqteiie gtndpiflss iaffqdslin qmtqiklsvy
      121 dvkdrsqgtm yllgsgtfvv kdllqdrhhr lyltlrsaes drvgnitvmg wqmeeksdqr
      181 ppvtrsldtv ngrmvlpvde sltealgirs kyaslrkdtl lksvfggaic rmyrfptteg
      241 nhlrileqma esvlslhvpr qfvkllleed aarvceleel gelspcwesl rrqivtqyqt
      301 iiltyqenlt dlhqykgpsf kasslkadkk lefvptnlhi qrmrvqddgg adqnydivti
      361 gapaahcqgf ksgglrkklh kfeetkkhts sscqsiiyip qdiirakeii aqintlktqv
      421 syyaerlsra akdrsatgle rtlailadkt rqlvtvcdck llatsihgln aarpdyiask
      481 asptsteeeq vmlrndqdtl marwsgrnsr sslqvdwhee ewekvwlnvd ksleciiqrv
      541 dkllqrehlq segcedglpg aggscsrkgn rgsraywirp edalcdapss pcpsaaccph
      601 pttpthcspp peesspgews ealypllttl tdcvammsdk akkamvfllm qdsaptiasf
      661 lslqyrrdvv fcqtltalic gfiiklrncl hddgflrqly tigllaqfes llstygeela
      721 mledmslgim dlrnvtfkvt qatsnastdm lpvitgnrdg fnvriplpgp lfdalpreiq
      781 sgmllrvqpv lfnvgineqq tlaerfgdts lqevinvesl vrlnsyfeqf kevlpedclp
      841 rsrsqtclpe llrflgqnvh arknknvdil wqaaevcrrl ngvrftscks akdrtamsvt
      901 leqclilqhe hgmapqvftq alecmrsigt revvtqknls glvpvrdlrl dpsllcsipl
      961 lalspnlliv wlflsiaylv aklrck
//
LOCUS       XP_061011940             986 aa            linear   MAM 02-DEC-2023
DEFINITION  inositol polyphosphate-4-phosphatase type I A isoform X1 [Dama
            dama].
ACCESSION   XP_061011940
VERSION     XP_061011940.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155957.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..986
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..986
                     /product="inositol polyphosphate-4-phosphatase type I A
                     isoform X1"
                     /calculated_mol_wt=110352
     Region          44..157
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     CDS             1..986
                     /gene="INPP4A"
                     /coded_by="XM_061155957.1:376..3336"
                     /db_xref="GeneID:133065176"
ORIGIN      
        1 mtarehsprh gararamqra stidvagdml glslagnvqd pdepilefsl acselhtpsl
       61 drkpnsfvav svttppqafw tkhaqteiie gtndpiflss iaffqdslin qmtqiklsvy
      121 dvkdrsqgtm yllgsgtfvv kdllqdrhhr lyltlrsaes drvgnitvmg wqmeeksdqr
      181 ppvtrsldtv ngrmvlpvde sltealgirs kyaslrkdtl lksvfggaic rmyrfptteg
      241 nhlrileqma esvlslhvpr qfvkllleed aarvceleel gelspcwesl rrqivtqyqt
      301 iiltyqenlt dlhqykgpsf kasslkadkk lefvptnlhi qrmrvqddgg adqnydivti
      361 gapaahcqgf ksgglrkklh kfeetkkhts sscqsiiyip qdiirakeii aqintlktqv
      421 syyaerlsra akdrsatgle rtlailadkt rqlvtvcdck llatsihgln aarpdyiask
      481 asptsteeeq vmlrndqdtl marwsgrnsr sslqvdwhee ewekvwlnvd ksleciiqrv
      541 dkllqrehlq segcedglpg aggscsrkgn rgsraywirp edalcdapss pcpsaaccph
      601 pttpthcspp peesspgews ealypllttl tdcvammsdk akkamvfllm qdsaptiasf
      661 lslqyrrdvv fcqtltalic gfiiklrncl hddgflrqly tigllaqfes llstygeela
      721 mledmslgim dlrnvtfkvt qatsnastdm lpvitgnrdg fnvriplpgp lfdalpreiq
      781 sgmllrvqpv lfnvgineqq tlaerfgdts lqevinvesl vrlnsyfeqf kevlpedclp
      841 rsrsqtclpe llrflgqnvh arknknvdil wqaaevcrrl ngvrftscks akdrtamsvt
      901 leqclilqhe hgmapqvftq alecmrsigt revvtqknls glvpvrdlrl dpsllcsipl
      961 lalspnlliv wlflsiaylv aklrck
//
LOCUS       XP_061011941             986 aa            linear   MAM 02-DEC-2023
DEFINITION  inositol polyphosphate-4-phosphatase type I A isoform X1 [Dama
            dama].
ACCESSION   XP_061011941
VERSION     XP_061011941.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155958.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..986
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..986
                     /product="inositol polyphosphate-4-phosphatase type I A
                     isoform X1"
                     /calculated_mol_wt=110352
     Region          44..157
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     CDS             1..986
                     /gene="INPP4A"
                     /coded_by="XM_061155958.1:369..3329"
                     /db_xref="GeneID:133065176"
ORIGIN      
        1 mtarehsprh gararamqra stidvagdml glslagnvqd pdepilefsl acselhtpsl
       61 drkpnsfvav svttppqafw tkhaqteiie gtndpiflss iaffqdslin qmtqiklsvy
      121 dvkdrsqgtm yllgsgtfvv kdllqdrhhr lyltlrsaes drvgnitvmg wqmeeksdqr
      181 ppvtrsldtv ngrmvlpvde sltealgirs kyaslrkdtl lksvfggaic rmyrfptteg
      241 nhlrileqma esvlslhvpr qfvkllleed aarvceleel gelspcwesl rrqivtqyqt
      301 iiltyqenlt dlhqykgpsf kasslkadkk lefvptnlhi qrmrvqddgg adqnydivti
      361 gapaahcqgf ksgglrkklh kfeetkkhts sscqsiiyip qdiirakeii aqintlktqv
      421 syyaerlsra akdrsatgle rtlailadkt rqlvtvcdck llatsihgln aarpdyiask
      481 asptsteeeq vmlrndqdtl marwsgrnsr sslqvdwhee ewekvwlnvd ksleciiqrv
      541 dkllqrehlq segcedglpg aggscsrkgn rgsraywirp edalcdapss pcpsaaccph
      601 pttpthcspp peesspgews ealypllttl tdcvammsdk akkamvfllm qdsaptiasf
      661 lslqyrrdvv fcqtltalic gfiiklrncl hddgflrqly tigllaqfes llstygeela
      721 mledmslgim dlrnvtfkvt qatsnastdm lpvitgnrdg fnvriplpgp lfdalpreiq
      781 sgmllrvqpv lfnvgineqq tlaerfgdts lqevinvesl vrlnsyfeqf kevlpedclp
      841 rsrsqtclpe llrflgqnvh arknknvdil wqaaevcrrl ngvrftscks akdrtamsvt
      901 leqclilqhe hgmapqvftq alecmrsigt revvtqknls glvpvrdlrl dpsllcsipl
      961 lalspnlliv wlflsiaylv aklrck
//
LOCUS       XP_061011942             986 aa            linear   MAM 02-DEC-2023
DEFINITION  inositol polyphosphate-4-phosphatase type I A isoform X1 [Dama
            dama].
ACCESSION   XP_061011942
VERSION     XP_061011942.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155959.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..986
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..986
                     /product="inositol polyphosphate-4-phosphatase type I A
                     isoform X1"
                     /calculated_mol_wt=110352
     Region          44..157
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     CDS             1..986
                     /gene="INPP4A"
                     /coded_by="XM_061155959.1:288..3248"
                     /db_xref="GeneID:133065176"
ORIGIN      
        1 mtarehsprh gararamqra stidvagdml glslagnvqd pdepilefsl acselhtpsl
       61 drkpnsfvav svttppqafw tkhaqteiie gtndpiflss iaffqdslin qmtqiklsvy
      121 dvkdrsqgtm yllgsgtfvv kdllqdrhhr lyltlrsaes drvgnitvmg wqmeeksdqr
      181 ppvtrsldtv ngrmvlpvde sltealgirs kyaslrkdtl lksvfggaic rmyrfptteg
      241 nhlrileqma esvlslhvpr qfvkllleed aarvceleel gelspcwesl rrqivtqyqt
      301 iiltyqenlt dlhqykgpsf kasslkadkk lefvptnlhi qrmrvqddgg adqnydivti
      361 gapaahcqgf ksgglrkklh kfeetkkhts sscqsiiyip qdiirakeii aqintlktqv
      421 syyaerlsra akdrsatgle rtlailadkt rqlvtvcdck llatsihgln aarpdyiask
      481 asptsteeeq vmlrndqdtl marwsgrnsr sslqvdwhee ewekvwlnvd ksleciiqrv
      541 dkllqrehlq segcedglpg aggscsrkgn rgsraywirp edalcdapss pcpsaaccph
      601 pttpthcspp peesspgews ealypllttl tdcvammsdk akkamvfllm qdsaptiasf
      661 lslqyrrdvv fcqtltalic gfiiklrncl hddgflrqly tigllaqfes llstygeela
      721 mledmslgim dlrnvtfkvt qatsnastdm lpvitgnrdg fnvriplpgp lfdalpreiq
      781 sgmllrvqpv lfnvgineqq tlaerfgdts lqevinvesl vrlnsyfeqf kevlpedclp
      841 rsrsqtclpe llrflgqnvh arknknvdil wqaaevcrrl ngvrftscks akdrtamsvt
      901 leqclilqhe hgmapqvftq alecmrsigt revvtqknls glvpvrdlrl dpsllcsipl
      961 lalspnlliv wlflsiaylv aklrck
//
LOCUS       XP_061011943             986 aa            linear   MAM 02-DEC-2023
DEFINITION  inositol polyphosphate-4-phosphatase type I A isoform X1 [Dama
            dama].
ACCESSION   XP_061011943
VERSION     XP_061011943.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155960.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..986
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..986
                     /product="inositol polyphosphate-4-phosphatase type I A
                     isoform X1"
                     /calculated_mol_wt=110352
     Region          44..157
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     CDS             1..986
                     /gene="INPP4A"
                     /coded_by="XM_061155960.1:339..3299"
                     /db_xref="GeneID:133065176"
ORIGIN      
        1 mtarehsprh gararamqra stidvagdml glslagnvqd pdepilefsl acselhtpsl
       61 drkpnsfvav svttppqafw tkhaqteiie gtndpiflss iaffqdslin qmtqiklsvy
      121 dvkdrsqgtm yllgsgtfvv kdllqdrhhr lyltlrsaes drvgnitvmg wqmeeksdqr
      181 ppvtrsldtv ngrmvlpvde sltealgirs kyaslrkdtl lksvfggaic rmyrfptteg
      241 nhlrileqma esvlslhvpr qfvkllleed aarvceleel gelspcwesl rrqivtqyqt
      301 iiltyqenlt dlhqykgpsf kasslkadkk lefvptnlhi qrmrvqddgg adqnydivti
      361 gapaahcqgf ksgglrkklh kfeetkkhts sscqsiiyip qdiirakeii aqintlktqv
      421 syyaerlsra akdrsatgle rtlailadkt rqlvtvcdck llatsihgln aarpdyiask
      481 asptsteeeq vmlrndqdtl marwsgrnsr sslqvdwhee ewekvwlnvd ksleciiqrv
      541 dkllqrehlq segcedglpg aggscsrkgn rgsraywirp edalcdapss pcpsaaccph
      601 pttpthcspp peesspgews ealypllttl tdcvammsdk akkamvfllm qdsaptiasf
      661 lslqyrrdvv fcqtltalic gfiiklrncl hddgflrqly tigllaqfes llstygeela
      721 mledmslgim dlrnvtfkvt qatsnastdm lpvitgnrdg fnvriplpgp lfdalpreiq
      781 sgmllrvqpv lfnvgineqq tlaerfgdts lqevinvesl vrlnsyfeqf kevlpedclp
      841 rsrsqtclpe llrflgqnvh arknknvdil wqaaevcrrl ngvrftscks akdrtamsvt
      901 leqclilqhe hgmapqvftq alecmrsigt revvtqknls glvpvrdlrl dpsllcsipl
      961 lalspnlliv wlflsiaylv aklrck
//
LOCUS       XP_061011944             984 aa            linear   MAM 02-DEC-2023
DEFINITION  inositol polyphosphate-4-phosphatase type I A isoform X2 [Dama
            dama].
ACCESSION   XP_061011944
VERSION     XP_061011944.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155961.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..984
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..984
                     /product="inositol polyphosphate-4-phosphatase type I A
                     isoform X2"
                     /calculated_mol_wt=110095
     Region          44..157
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     CDS             1..984
                     /gene="INPP4A"
                     /coded_by="XM_061155961.1:273..3227"
                     /db_xref="GeneID:133065176"
ORIGIN      
        1 mtarehsprh gararamqra stidvagdml glslagnvqd pdepilefsl acselhtpsl
       61 drkpnsfvav svttppqafw tkhaqteiie gtndpiflss iaffqdslin qmtqiklsvy
      121 dvkdrsqgtm yllgsgtfvv kdllqdrhhr lyltlrsaes drvgnitvmg wqmeeksdqr
      181 ppvtrsldtv ngrmvlpvde sltealgirs kyaslrkdtl lksvfggaic rmyrfptteg
      241 nhlrileqma esvlslhvpr qfvkllleed aarvceleel gelspcwesl rrqivtqyqt
      301 iiltyqenlt dlhqykgpsf kasslkadkk lefvptnlhi qrmrvqddgg adqnydivti
      361 gapaahcqgf ksgglrkklh kfeetkkhts sscqsiiyip qdiirakeii aqintlktqv
      421 syyaerlsra akdrsatgle rtlailadkt rqlvtvcdck llatsihgln aarpdyiask
      481 asptsteeeq vmlrndqdtl marwsgrnsr sslqvdwhee ewvwlnvdks leciiqrvdk
      541 llqrehlqse gcedglpgag gscsrkgnrg sraywirped alcdapsspc psaaccphpt
      601 tpthcspppe esspgewsea lypllttltd cvammsdkak kamvfllmqd saptiasfls
      661 lqyrrdvvfc qtltalicgf iiklrnclhd dgflrqlyti gllaqfesll stygeelaml
      721 edmslgimdl rnvtfkvtqa tsnastdmlp vitgnrdgfn vriplpgplf dalpreiqsg
      781 mllrvqpvlf nvgineqqtl aerfgdtslq evinveslvr lnsyfeqfke vlpedclprs
      841 rsqtclpell rflgqnvhar knknvdilwq aaevcrrlng vrftscksak drtamsvtle
      901 qclilqhehg mapqvftqal ecmrsigtre vvtqknlsgl vpvrdlrldp sllcsiplla
      961 lspnllivwl flsiaylvak lrck
//
LOCUS       XP_061011945             970 aa            linear   MAM 02-DEC-2023
DEFINITION  inositol polyphosphate-4-phosphatase type I A isoform X3 [Dama
            dama].
ACCESSION   XP_061011945
VERSION     XP_061011945.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155962.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..970
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..970
                     /product="inositol polyphosphate-4-phosphatase type I A
                     isoform X3"
                     /calculated_mol_wt=108798
     Region          44..157
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     CDS             1..970
                     /gene="INPP4A"
                     /coded_by="XM_061155962.1:258..3170"
                     /db_xref="GeneID:133065176"
ORIGIN      
        1 mtarehsprh gararamqra stidvagdml glslagnvqd pdepilefsl acselhtpsl
       61 drkpnsfvav svttppqafw tkhaqteiie gtndpiflss iaffqdslin qmtqiklsvy
      121 dvkdrsqgtm yllgsgtfvv kdllqdrhhr lyltlrsaes drvgnitvmg wqmeeksdqr
      181 ppvtrsldtv ngrmvlpvde sltealgirs kyaslrkdtl lksvfggaic rmyrfptteg
      241 nhlrileqma esvlslhvpr qfvkllleed aarvceleel gelspcwesl rrqivtqyqt
      301 iiltyqenlt dlhqykgpsf kasslkadkk lefvptnlhi qrmrvqddgg adqnydivti
      361 gapaahcqgf ksgglrkklh kfeetkkhts sscqsiiyip qdiirakeii aqintlktqv
      421 syyaerlsra akdrsatgle rtlailadkt rqlvtvcdck llatsihgln aarpdyiask
      481 asptsteeeq vmlrndqdtl marwsgrnsr sslqvdwhee ewekvwlnvd ksleciiqrv
      541 dkllqrehlq segcedglpg aggscsrkgn rgsraywirp edalcdapss pcpsaaccph
      601 pttpthcspp peesspgews ealypllttl tdcvammsdk akkamvfllm qdsaptiasf
      661 lslqyrrdvv fcqtltalic gfiiklrncl hddgflrqly tigllaqfes llstygeela
      721 mledmslgim dlrnvtfkvt qatsnastdm lpvitgnrdg fnvriplpgp lfdalpreiq
      781 sgmllrvqpv lfnvgineqq tlaerfgdts lqevinvesl vrlnsyfeqf kevlpedclp
      841 rsrsqtclpe llrflgqnvh arknknvdil wqaaevcrrl ngvrftscks akdrtamsvt
      901 leqclilqhe hgmapqvftq alecmrsegc rrentmknvg srkyafnslq lkafpkhyrp
      961 pegtygkvet
//
LOCUS       XP_061011946             949 aa            linear   MAM 02-DEC-2023
DEFINITION  inositol polyphosphate-4-phosphatase type I A isoform X4 [Dama
            dama].
ACCESSION   XP_061011946
VERSION     XP_061011946.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155963.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..949
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..949
                     /product="inositol polyphosphate-4-phosphatase type I A
                     isoform X4"
                     /calculated_mol_wt=106462
     Region          44..157
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     CDS             1..949
                     /gene="INPP4A"
                     /coded_by="XM_061155963.1:270..3119"
                     /db_xref="GeneID:133065176"
ORIGIN      
        1 mtarehsprh gararamqra stidvagdml glslagnvqd pdepilefsl acselhtpsl
       61 drkpnsfvav svttppqafw tkhaqteiie gtndpiflss iaffqdslin qmtqiklsvy
      121 dvkdrsqgtm yllgsgtfvv kdllqdrhhr lyltlrsaes drvgnitvmg wqmeeksdqr
      181 ppvtrsldtv ngrmvlpvde sltealgirs kyaslrkdtl lksvfggaic rmyrfptteg
      241 nhlrileqma esvlslhvpr qfvkllleed aarvceleel gelspcwesl rrqivtqyqt
      301 iiltyqenlt dlhqykgpsf kasslkadkk lefvptnlhi qrmrvqddgg adqnydivti
      361 gapaahcqgf ksgglrkklh kfeetkkhts sscqsiiyip qdiirakeii aqintlktqv
      421 syyaerlsra akdrsatgle rtlailadkt rqlvtvcdck llatsihgln aarpdyiask
      481 asptsteeeq vmlrndqdtl marwsgrnsr sslqvdwhee ewekvwlnvd ksleciiqrv
      541 dkllqrehlq segcedglpg aggscsrkdc spppeesspg ewsealypll ttltdcvamm
      601 sdkakkamvf llmqdsapti asflslqyrr dvvfcqtlta licgfiiklr nclhddgflr
      661 qlytigllaq fesllstyge elamledmsl gimdlrnvtf kvtqatsnas tdmlpvitgn
      721 rdgfnvripl pgplfdalpr eiqsgmllrv qpvlfnvgin eqqtlaerfg dtslqevinv
      781 eslvrlnsyf eqfkevlped clprsrsqtc lpellrflgq nvharknknv dilwqaaevc
      841 rrlngvrfts cksakdrtam svtleqclil qhehgmapqv ftqalecmrs igtrevvtqk
      901 nlsglvpvrd lrldpsllcs ipllalspnl livwlflsia ylvaklrck
//
LOCUS       XP_061011947             939 aa            linear   MAM 02-DEC-2023
DEFINITION  inositol polyphosphate-4-phosphatase type I A isoform X5 [Dama
            dama].
ACCESSION   XP_061011947
VERSION     XP_061011947.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155964.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..939
                     /product="inositol polyphosphate-4-phosphatase type I A
                     isoform X5"
                     /calculated_mol_wt=105105
     Region          44..157
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     CDS             1..939
                     /gene="INPP4A"
                     /coded_by="XM_061155964.1:259..3078"
                     /db_xref="GeneID:133065176"
ORIGIN      
        1 mtarehsprh gararamqra stidvagdml glslagnvqd pdepilefsl acselhtpsl
       61 drkpnsfvav svttppqafw tkhaqteiie gtndpiflss iaffqdslin qmtqiklsvy
      121 dvkdrsqgtm yllgsgtfvv kdllqdrhhr lyltlrsaes drvgnitvmg wqmeeksdqr
      181 ppvtrsldtv ngrmvlpvde sltealgirs kyaslrkdtl lksvfggaic rmyrfptteg
      241 nhlrileqma esvlslhvpr qfvkllleed aarvceleel gelspcwesl rrqivtqyqt
      301 iiltyqenlt dlhqykgpsf kasslkadkk lefvptnlhi qrmrvqddgg adqnydivti
      361 gapaahcqgf ksgglrkklh kfeetkkhts sscqsiiyip qdiirakeii aqintlktqv
      421 syyaerlsra akdrsatgle rtlailadkt rqlvtvcdck llatsihgln aarpdyiask
      481 asptsteeeq vmlrndqdtl marwsgrnsr sslqvdwhee ewekvwlnvd ksleciiqrv
      541 dkllqrehlq segcedglpg aggscsrkgn rgsraywirp edalcdapss pcpsaaccph
      601 pttpthcspp peesspgews ealypllttl tdcvammsdk akkamvfllm qdsaptiasf
      661 lslqyrrdvv fcqtltalic gfiiklrncl hddgflrqly tigllaqfes llstygeela
      721 mledmslgim dlrnvtfkvt qatsnastdm lpvitgnrdg fnvriplpgp lfdalpreiq
      781 sgmllrvqpv lfnvgineqq tlaerfgdts lqevinvesl vrlnsyfeqf kevlpedclp
      841 rsrsqtclpe llrflgqnvh arknknvdil wqaaevcrrl ngvrftscks akdrtamsvt
      901 leqclilqhe hgmapqvftq alecmrrgqs egstfslqs
//
LOCUS       XP_061011948             933 aa            linear   MAM 02-DEC-2023
DEFINITION  inositol polyphosphate-4-phosphatase type I A isoform X6 [Dama
            dama].
ACCESSION   XP_061011948
VERSION     XP_061011948.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155965.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..933
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..933
                     /product="inositol polyphosphate-4-phosphatase type I A
                     isoform X6"
                     /calculated_mol_wt=104908
     Region          44..157
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     CDS             1..933
                     /gene="INPP4A"
                     /coded_by="XM_061155965.1:258..3059"
                     /db_xref="GeneID:133065176"
ORIGIN      
        1 mtarehsprh gararamqra stidvagdml glslagnvqd pdepilefsl acselhtpsl
       61 drkpnsfvav svttppqafw tkhaqteiie gtndpiflss iaffqdslin qmtqiklsvy
      121 dvkdrsqgtm yllgsgtfvv kdllqdrhhr lyltlrsaes drvgnitvmg wqmeeksdqr
      181 ppvtrsldtv ngrmvlpvde sltealgirs kyaslrkdtl lksvfggaic rmyrfptteg
      241 nhlrileqma esvlslhvpr qfvkllleed aarvceleel gelspcwesl rrqivtqyqt
      301 iiltyqenlt dlhqykgpsf kasslkadkk lefvptnlhi qrmrvqddgg adqnydivti
      361 gapaahcqgf ksgglrkklh kfeetkkhts sscqsiiyip qdiirakeii aqintlktqv
      421 syyaerlsra akdrsatgle rtlailadkt rqlvtvcdck llatsihgln aarpdyiask
      481 asptsteeeq vmlrndqdtl marwsgrnsr sslqvdwhee ewekvwlnvd ksleciiqrv
      541 dkllqrehlq segcedglpg aggscsrkdc spppeesspg ewsealypll ttltdcvamm
      601 sdkakkamvf llmqdsapti asflslqyrr dvvfcqtlta licgfiiklr nclhddgflr
      661 qlytigllaq fesllstyge elamledmsl gimdlrnvtf kvtqatsnas tdmlpvitgn
      721 rdgfnvripl pgplfdalpr eiqsgmllrv qpvlfnvgin eqqtlaerfg dtslqevinv
      781 eslvrlnsyf eqfkevlped clprsrsqtc lpellrflgq nvharknknv dilwqaaevc
      841 rrlngvrfts cksakdrtam svtleqclil qhehgmapqv ftqalecmrs egcrrentmk
      901 nvgsrkyafn slqlkafpkh yrppegtygk vet
//
LOCUS       XP_061011949            1301 aa            linear   MAM 02-DEC-2023
DEFINITION  von Willebrand factor A domain-containing protein 3B [Dama dama].
ACCESSION   XP_061011949
VERSION     XP_061011949.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155966.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1301
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1301
                     /product="von Willebrand factor A domain-containing
                     protein 3B"
                     /calculated_mol_wt=146813
     Region          <176..>251
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Region          502..648
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cd00198"
                     /db_xref="CDD:238119"
     Site            order(508,578,601)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238119"
     Region          1048..1174
                     /region_name="DUF4537"
                     /note="Domain of unknown function (DUF4537); pfam15057"
                     /db_xref="CDD:464475"
     CDS             1..1301
                     /gene="VWA3B"
                     /coded_by="XM_061155966.1:239..4144"
                     /db_xref="GeneID:133065178"
ORIGIN      
        1 mevpgsssti sedqtrrqeg lsdtrtdsvk qslisseewl qlhglksnkl tlkqilsqig
       61 fphcedyvms lgrlvasrya nglfpqiytt edgrvynlta kselisqyme hltqavesyk
      121 qrmdwltsns rqifgvileq citivldfgg mleeelnlcr daltmvlqeq vayiakfnvi
      181 rvsqepvkwq enavpvtaps iaaaiswvek lpfelassht srldalleag kdeviesiyy
      241 fvvgdvpees kelllqqale ipcpvctvsf nargqgtiaf lkdlsaktfs rfhafaerte
      301 cvefpafpik dgdsvitwns rklkgklppg agvredvfli wremeeagst laqiqrlvae
      361 tpktsvattd hgahesnped twdsekwlqk yglkaqklsf ynviadcsfr hadgvvdika
      421 kpenesvqts aetnkktvha kycsrfvhap wkdgslvhvc itkekymwfs ervhavlaqi
      481 qrrikwlqdg srglfgkvps dcvyilidts hsmkgkldlv kskviqliqe qlkhkrkfnf
      541 vqfdaqasaw qeklveinee nlkgaqawir dikigsstnt lsalqiafad eetqviyllt
      601 dgrpdqspem vmdqvkvfqk ipiytisfcy ndenangflk dlasltggef hsynfgckdp
      661 ytpeavqded ltllikemeq ghndlekvqd lyseslvmdw wynaekdgdk hqkeicsmvs
      721 tpgkcakpha dvkssrmped pssqkiqgkk llhaeptkts llrsqlstlk ssacserrdr
      781 isnsssrnmp sdremgillt nefpddksle rltregsqvy dqdsagmssa swlkihglaa
      841 kkltimdals maaiphssty vpvldkhvvs kvfdevfpla hvcndtnkmt linpqgvkln
      901 iykqkveqai ksyekrlnki vwralspeek kkldankpmq ylenkaalne alerlnwpis
      961 lkelsmlene ilagkmyvqq amelqeaikk enyvskalee vdteplfefp epyskfplai
     1021 yfahdnqqki qgtptkksks kkldplkgqk viarcdengf yfpgvvkrcv spthalvgfr
     1081 ygdtkvvpis fitpvggamp cpllqvgdyv fakivipkgf dfyvpaivia lpnqdmaedk
     1141 fytvlkcnnr refcprsali kisqnkyals cshiksppiq edskvedmdt knstllvwpi
     1201 kevntgdlqa trqenprrkk kkaskrlplq evvssdsdda srgnrsrdsh pkrrpkpklg
     1261 gghhvsqehp evslkdsace ltpqfpgqfr pqhsknsntl k
//
LOCUS       XP_061011950            1301 aa            linear   MAM 02-DEC-2023
DEFINITION  von Willebrand factor A domain-containing protein 3B [Dama dama].
ACCESSION   XP_061011950
VERSION     XP_061011950.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155967.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1301
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1301
                     /product="von Willebrand factor A domain-containing
                     protein 3B"
                     /calculated_mol_wt=146813
     Region          <176..>251
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Region          502..648
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cd00198"
                     /db_xref="CDD:238119"
     Site            order(508,578,601)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238119"
     Region          1048..1174
                     /region_name="DUF4537"
                     /note="Domain of unknown function (DUF4537); pfam15057"
                     /db_xref="CDD:464475"
     CDS             1..1301
                     /gene="VWA3B"
                     /coded_by="XM_061155967.1:163..4068"
                     /db_xref="GeneID:133065178"
ORIGIN      
        1 mevpgsssti sedqtrrqeg lsdtrtdsvk qslisseewl qlhglksnkl tlkqilsqig
       61 fphcedyvms lgrlvasrya nglfpqiytt edgrvynlta kselisqyme hltqavesyk
      121 qrmdwltsns rqifgvileq citivldfgg mleeelnlcr daltmvlqeq vayiakfnvi
      181 rvsqepvkwq enavpvtaps iaaaiswvek lpfelassht srldalleag kdeviesiyy
      241 fvvgdvpees kelllqqale ipcpvctvsf nargqgtiaf lkdlsaktfs rfhafaerte
      301 cvefpafpik dgdsvitwns rklkgklppg agvredvfli wremeeagst laqiqrlvae
      361 tpktsvattd hgahesnped twdsekwlqk yglkaqklsf ynviadcsfr hadgvvdika
      421 kpenesvqts aetnkktvha kycsrfvhap wkdgslvhvc itkekymwfs ervhavlaqi
      481 qrrikwlqdg srglfgkvps dcvyilidts hsmkgkldlv kskviqliqe qlkhkrkfnf
      541 vqfdaqasaw qeklveinee nlkgaqawir dikigsstnt lsalqiafad eetqviyllt
      601 dgrpdqspem vmdqvkvfqk ipiytisfcy ndenangflk dlasltggef hsynfgckdp
      661 ytpeavqded ltllikemeq ghndlekvqd lyseslvmdw wynaekdgdk hqkeicsmvs
      721 tpgkcakpha dvkssrmped pssqkiqgkk llhaeptkts llrsqlstlk ssacserrdr
      781 isnsssrnmp sdremgillt nefpddksle rltregsqvy dqdsagmssa swlkihglaa
      841 kkltimdals maaiphssty vpvldkhvvs kvfdevfpla hvcndtnkmt linpqgvkln
      901 iykqkveqai ksyekrlnki vwralspeek kkldankpmq ylenkaalne alerlnwpis
      961 lkelsmlene ilagkmyvqq amelqeaikk enyvskalee vdteplfefp epyskfplai
     1021 yfahdnqqki qgtptkksks kkldplkgqk viarcdengf yfpgvvkrcv spthalvgfr
     1081 ygdtkvvpis fitpvggamp cpllqvgdyv fakivipkgf dfyvpaivia lpnqdmaedk
     1141 fytvlkcnnr refcprsali kisqnkyals cshiksppiq edskvedmdt knstllvwpi
     1201 kevntgdlqa trqenprrkk kkaskrlplq evvssdsdda srgnrsrdsh pkrrpkpklg
     1261 gghhvsqehp evslkdsace ltpqfpgqfr pqhsknsntl k
//
LOCUS       XP_061011951             122 aa            linear   MAM 02-DEC-2023
DEFINITION  histone H2B type 2-K1-like [Dama dama].
ACCESSION   XP_061011951
VERSION     XP_061011951.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155968.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..122
                     /product="histone H2B type 2-K1-like"
                     /calculated_mol_wt=13588
     Region          32..119
                     /region_name="HFD_H2B"
                     /note="histone-fold domain found in histone H2B and
                     similar proteins; cd22910"
                     /db_xref="CDD:467035"
     Site            order(32,34,36..38,40..42,45..52,54..55,58..59,62..63,
                     65..67,69..71,75,85..86,88,91..92,95,98..100,103,106..108,
                     110..111,114..115,118..119)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:467035"
     Site            order(35..37,39..40,43..45,50..52,56,92,96,105..106,
                     108..109,112..113,115..116,119)
                     /site_type="other"
                     /note="Hif1 binding site [polypeptide binding]"
                     /db_xref="CDD:467035"
     Site            order(58,61..62,64..65,68,73,76,79..81,89..90,93,97..98)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467035"
     CDS             1..122
                     /gene="LOC133065179"
                     /coded_by="XM_061155968.1:1..369"
                     /db_xref="GeneID:133065179"
ORIGIN      
        1 msaehgqlqq pggrrgrspg dkksrrrsrr ketysmyiyk vlkqvhpdig isskamsimn
       61 lfvndlferl ageatrlaqy sgrttltsre vqtamrlllp gelakhavse gtkamtkyts
      121 sk
//
LOCUS       XP_061011952            1875 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 131 [Dama dama].
ACCESSION   XP_061011952
VERSION     XP_061011952.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155969.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1875
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1875
                     /product="transmembrane protein 131"
                     /calculated_mol_wt=203369
     Region          108..190
                     /region_name="TMEM131_like_N"
                     /note="Transmembrane protein 131-like N-terminal;
                     pfam12371"
                     /db_xref="CDD:463553"
     Region          341..>1212
                     /region_name="TMEM131_like"
                     /note="Transmembrane protein 131-like; pfam19532"
                     /db_xref="CDD:437364"
     CDS             1..1875
                     /gene="TMEM131"
                     /coded_by="XM_061155969.1:16..5643"
                     /db_xref="GeneID:133065180"
ORIGIN      
        1 mgkragggaa gsaaaastsa vaglepaagr gggprsaaag llgalhlvmt lvvaaaraek
       61 eafiqsesii evlrfddggl lqtettlgls shqqksisly rgncrpirfe ppmldfheqp
      121 vgmpkmekvy lhnpsseeti tlvsisatts hfhasffqnr kilpggntsf dvvflarvvg
      181 nventlfint snhgvftyqv fgvgvpnpyr lrpflgarvp vnssfspiin ihnphseplq
      241 vvemyssggd lhlelptgqq ggtrklweip pyetkgvmra sfssreadnh tafiriktna
      301 sdstefiilp vevevttapg iysstemldf gtlrtqdlpk vlnlhllnsg tkdvpitsvr
      361 ptpqndaitv hfkpitlkas eskytkvasi sfdaskakkp sqfsgkitvk akeksyskle
      421 ipyqaevldg ylgfdhaatl fhirdspadp verpiyltnt fsfailihdv llpeeaktmf
      481 kvhnfskpvl ilpngsgyif tlffmpstss mhidnnilli tnaskfhlpv rvytgfldyf
      541 vlppkieerf idfgilsate asnilfaiin snpielaiks whiigdglsi elvatkrgnr
      601 ttiisslpef eksslsdqss vilasgyfav frvkltakkl egihdgaiqi ttdyeiltip
      661 vkaviavgsl tcfpkhmvlp psfpgkivhq slnimnsfsq kvkiqqirsl sedvrfyykr
      721 lrgnkedlep gkkskianiy fdpglqcgdh cyvglpflsk sepkvqpgia mqedawdtdw
      781 dlhqslfkgw mgikensghr lnamfevntd lqknilskvs aelswpslls sprlvrfplt
      841 ntncsseeei mlenpadvpi yiqfiplaly sspsifvdkl isrfnlskva kidlrtqefq
      901 vfrnsahplq sstgftegls rhlvlnlilk pgekksvkvk ftpvhnrtvs sliiirnnlt
      961 vmdavmvqgq gttenlrvag klpgpgsslr fkiteallkd ctegmrlrep nftlkrtfkv
     1021 entgqlpihi etievsgysc egygfkvinc qefalsanas kdivilftpd ftasrvirel
     1081 kfitasgsef vfvlnaslpy hmlatcaeal prpnwelaly iiisgimsal fllvigtayl
     1141 eaqgiwepfr rrlsfeasnp pfdvgrpfdl rrivgisseg nlntlscdpg hsrgfcgagg
     1201 sasrpgagsh kqcspsvhph sshssrssad venvraknsa sasgrtnaqs askasplvfe
     1261 shsvaqghsa grkskgarqg qhggqphghg pleqhspppp pvpqhqgpqp erlspappap
     1321 ppppelpggs rhssedsdit slieamdkdf ehhdappldv fteqppspls kskgkgkppq
     1381 rkvkppkkqe ekekkgkgkp ledelkdsla dddsssttte tsnpdtepll kedtekqkgk
     1441 qampekhene msqvkqkskk llnvkkeipa dvkpsslelp ytapleskqr rnlptkiplp
     1501 ttltsgskpr nsqktkgtsk lvdsrppala kflpnsqelg ntsssegekd spppewdsvp
     1561 vhkpgssads lyklslqtln adiflkrhqt spppaspspp aapcpftarg syssivhgsp
     1621 gsdskakqps gskhkltkaa slpgkngnpt faavtagydk spggngfakv sssktdfsss
     1681 lgishtpvds dgsdssglws pvsnpsspdf tplnsfsafg nsfnltgevf sklglarscn
     1741 qasqrswnel sggpsylwds patepgpswp assgspthta tpilgstssl wsstpfsssi
     1801 wssslhstlp ftspasalps iglmgpesap aphapstasp tddlgqtynp wriwsptigr
     1861 rssdpwsnsh fphen
//
LOCUS       XP_061011953             617 aa            linear   MAM 02-DEC-2023
DEFINITION  tyrosine-protein kinase ZAP-70 isoform X1 [Dama dama].
ACCESSION   XP_061011953
VERSION     XP_061011953.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155970.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..617
                     /product="tyrosine-protein kinase ZAP-70 isoform X1"
                     /calculated_mol_wt=69721
     Region          8..111
                     /region_name="SH2_N-SH2_Zap70_Syk_like"
                     /note="N-terminal Src homology 2 (SH2) domain found in
                     Zeta-chain-associated protein kinase 70 (ZAP-70) and
                     Spleen tyrosine kinase (Syk) proteins; cd09938"
                     /db_xref="CDD:198191"
     Site            order(17,37,58,60)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198191"
     Site            order(59,71..72,74,93..94)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198191"
     Region          152..256
                     /region_name="SH2_C-SH2_Zap70"
                     /note="C-terminal Src homology 2 (SH2) domain found in
                     Zeta-chain-associated protein kinase 70 (ZAP-70); cd10402"
                     /db_xref="CDD:198265"
     Site            order(170,190,192,199)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198265"
     Site            order(211,239)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198265"
     Region          331..599
                     /region_name="PTKc_Zap-70"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     Zeta-chain-associated protein of 70kDa; cd05115"
                     /db_xref="CDD:270686"
     Site            order(342..347,350,365,367,412..416,418..419,459,463..464,
                     466,476..477,496..500,509,543)
                     /site_type="active"
                     /db_xref="CDD:270686"
     Site            order(342..347,350,365,367,412..416,418..419,463..464,466,
                     476..477)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270686"
     Site            order(360,392..395,398,400,413,438,441..442,445,469,
                     471..472,592,595..596,599)
                     /site_type="other"
                     /note="SH2 linker interface [polypeptide binding]"
                     /db_xref="CDD:270686"
     Site            order(459,463,496..500,509,543)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270686"
     Site            476..502
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270686"
     CDS             1..617
                     /gene="LOC133065181"
                     /coded_by="XM_061155970.1:337..2190"
                     /db_xref="GeneID:133065181"
ORIGIN      
        1 mpdpaahlpf fygsisraea eehlklagma dglfllrqcl rslggyvlsl vhevrihhfp
       61 ierqlngtya iaggkahcgp aelcefysrd pdglpcnlrk pcnrpsglep qpgvfdnlrd
      121 amvrdyvrqt wklegealeq aiisqapqve kliattaher mpwyhssltr eeaerklysg
      181 sqtdgkfllr prkepgtyal sliygktvyh ylisqdkagk ycipegtkfd tlwqlveylk
      241 lkadgliycl keacpnssas pgaaaptlpa hpstftqpqr ridtlnsdgy tpeparlvss
      301 ekprtmpmdt svyespysdp eelknkklfl krenllmadi elgcgnfgsv rqgvyrmrkk
      361 qidvaikvlk qstekadkde mmreaqimhq ldnpyivrli gvcqaealml vmemagggpl
      421 hkflagrkee ipvsnvaell hqvsmgmkyl eeknfvhrdl aarnvllvnr hyakisdfgl
      481 skalgaddsy ytarsagkwp lkwyapecin frkfssrsdv wsygvtmwea fsygqkpykk
      541 mkgpevmafi eqgkrmecpp ecppemyklm sdcwtykwed rpdfaaveqr mrtyyyslat
      601 kaeepgacan gveaacp
//
LOCUS       XP_061011954             617 aa            linear   MAM 02-DEC-2023
DEFINITION  tyrosine-protein kinase ZAP-70 isoform X1 [Dama dama].
ACCESSION   XP_061011954
VERSION     XP_061011954.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155971.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..617
                     /product="tyrosine-protein kinase ZAP-70 isoform X1"
                     /calculated_mol_wt=69721
     Region          8..111
                     /region_name="SH2_N-SH2_Zap70_Syk_like"
                     /note="N-terminal Src homology 2 (SH2) domain found in
                     Zeta-chain-associated protein kinase 70 (ZAP-70) and
                     Spleen tyrosine kinase (Syk) proteins; cd09938"
                     /db_xref="CDD:198191"
     Site            order(17,37,58,60)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198191"
     Site            order(59,71..72,74,93..94)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198191"
     Region          152..256
                     /region_name="SH2_C-SH2_Zap70"
                     /note="C-terminal Src homology 2 (SH2) domain found in
                     Zeta-chain-associated protein kinase 70 (ZAP-70); cd10402"
                     /db_xref="CDD:198265"
     Site            order(170,190,192,199)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198265"
     Site            order(211,239)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198265"
     Region          331..599
                     /region_name="PTKc_Zap-70"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     Zeta-chain-associated protein of 70kDa; cd05115"
                     /db_xref="CDD:270686"
     Site            order(342..347,350,365,367,412..416,418..419,459,463..464,
                     466,476..477,496..500,509,543)
                     /site_type="active"
                     /db_xref="CDD:270686"
     Site            order(342..347,350,365,367,412..416,418..419,463..464,466,
                     476..477)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270686"
     Site            order(360,392..395,398,400,413,438,441..442,445,469,
                     471..472,592,595..596,599)
                     /site_type="other"
                     /note="SH2 linker interface [polypeptide binding]"
                     /db_xref="CDD:270686"
     Site            order(459,463,496..500,509,543)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270686"
     Site            476..502
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270686"
     CDS             1..617
                     /gene="LOC133065181"
                     /coded_by="XM_061155971.1:197..2050"
                     /db_xref="GeneID:133065181"
ORIGIN      
        1 mpdpaahlpf fygsisraea eehlklagma dglfllrqcl rslggyvlsl vhevrihhfp
       61 ierqlngtya iaggkahcgp aelcefysrd pdglpcnlrk pcnrpsglep qpgvfdnlrd
      121 amvrdyvrqt wklegealeq aiisqapqve kliattaher mpwyhssltr eeaerklysg
      181 sqtdgkfllr prkepgtyal sliygktvyh ylisqdkagk ycipegtkfd tlwqlveylk
      241 lkadgliycl keacpnssas pgaaaptlpa hpstftqpqr ridtlnsdgy tpeparlvss
      301 ekprtmpmdt svyespysdp eelknkklfl krenllmadi elgcgnfgsv rqgvyrmrkk
      361 qidvaikvlk qstekadkde mmreaqimhq ldnpyivrli gvcqaealml vmemagggpl
      421 hkflagrkee ipvsnvaell hqvsmgmkyl eeknfvhrdl aarnvllvnr hyakisdfgl
      481 skalgaddsy ytarsagkwp lkwyapecin frkfssrsdv wsygvtmwea fsygqkpykk
      541 mkgpevmafi eqgkrmecpp ecppemyklm sdcwtykwed rpdfaaveqr mrtyyyslat
      601 kaeepgacan gveaacp
//
LOCUS       XP_061011955             617 aa            linear   MAM 02-DEC-2023
DEFINITION  tyrosine-protein kinase ZAP-70 isoform X1 [Dama dama].
ACCESSION   XP_061011955
VERSION     XP_061011955.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155972.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..617
                     /product="tyrosine-protein kinase ZAP-70 isoform X1"
                     /calculated_mol_wt=69721
     Region          8..111
                     /region_name="SH2_N-SH2_Zap70_Syk_like"
                     /note="N-terminal Src homology 2 (SH2) domain found in
                     Zeta-chain-associated protein kinase 70 (ZAP-70) and
                     Spleen tyrosine kinase (Syk) proteins; cd09938"
                     /db_xref="CDD:198191"
     Site            order(17,37,58,60)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198191"
     Site            order(59,71..72,74,93..94)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198191"
     Region          152..256
                     /region_name="SH2_C-SH2_Zap70"
                     /note="C-terminal Src homology 2 (SH2) domain found in
                     Zeta-chain-associated protein kinase 70 (ZAP-70); cd10402"
                     /db_xref="CDD:198265"
     Site            order(170,190,192,199)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198265"
     Site            order(211,239)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198265"
     Region          331..599
                     /region_name="PTKc_Zap-70"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     Zeta-chain-associated protein of 70kDa; cd05115"
                     /db_xref="CDD:270686"
     Site            order(342..347,350,365,367,412..416,418..419,459,463..464,
                     466,476..477,496..500,509,543)
                     /site_type="active"
                     /db_xref="CDD:270686"
     Site            order(342..347,350,365,367,412..416,418..419,463..464,466,
                     476..477)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270686"
     Site            order(360,392..395,398,400,413,438,441..442,445,469,
                     471..472,592,595..596,599)
                     /site_type="other"
                     /note="SH2 linker interface [polypeptide binding]"
                     /db_xref="CDD:270686"
     Site            order(459,463,496..500,509,543)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270686"
     Site            476..502
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270686"
     CDS             1..617
                     /gene="LOC133065181"
                     /coded_by="XM_061155972.1:546..2399"
                     /db_xref="GeneID:133065181"
ORIGIN      
        1 mpdpaahlpf fygsisraea eehlklagma dglfllrqcl rslggyvlsl vhevrihhfp
       61 ierqlngtya iaggkahcgp aelcefysrd pdglpcnlrk pcnrpsglep qpgvfdnlrd
      121 amvrdyvrqt wklegealeq aiisqapqve kliattaher mpwyhssltr eeaerklysg
      181 sqtdgkfllr prkepgtyal sliygktvyh ylisqdkagk ycipegtkfd tlwqlveylk
      241 lkadgliycl keacpnssas pgaaaptlpa hpstftqpqr ridtlnsdgy tpeparlvss
      301 ekprtmpmdt svyespysdp eelknkklfl krenllmadi elgcgnfgsv rqgvyrmrkk
      361 qidvaikvlk qstekadkde mmreaqimhq ldnpyivrli gvcqaealml vmemagggpl
      421 hkflagrkee ipvsnvaell hqvsmgmkyl eeknfvhrdl aarnvllvnr hyakisdfgl
      481 skalgaddsy ytarsagkwp lkwyapecin frkfssrsdv wsygvtmwea fsygqkpykk
      541 mkgpevmafi eqgkrmecpp ecppemyklm sdcwtykwed rpdfaaveqr mrtyyyslat
      601 kaeepgacan gveaacp
//
LOCUS       XP_061011956             457 aa            linear   MAM 02-DEC-2023
DEFINITION  tyrosine-protein kinase ZAP-70 isoform X2 [Dama dama].
ACCESSION   XP_061011956
VERSION     XP_061011956.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155973.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..457
                     /product="tyrosine-protein kinase ZAP-70 isoform X2"
                     /calculated_mol_wt=51920
     Region          1..96
                     /region_name="SH2"
                     /note="Src homology 2 (SH2) domain; cl15255"
                     /db_xref="CDD:472789"
     Site            order(10,30,50,52)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198173"
     Site            order(51,78)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198173"
     Region          171..439
                     /region_name="PTKc_Zap-70"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     Zeta-chain-associated protein of 70kDa; cd05115"
                     /db_xref="CDD:270686"
     Site            order(182..187,190,205,207,252..256,258..259,299,303..304,
                     306,316..317,336..340,349,383)
                     /site_type="active"
                     /db_xref="CDD:270686"
     Site            order(182..187,190,205,207,252..256,258..259,303..304,306,
                     316..317)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270686"
     Site            order(200,232..235,238,240,253,278,281..282,285,309,
                     311..312,432,435..436,439)
                     /site_type="other"
                     /note="SH2 linker interface [polypeptide binding]"
                     /db_xref="CDD:270686"
     Site            order(299,303,336..340,349,383)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270686"
     Site            316..342
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270686"
     CDS             1..457
                     /gene="LOC133065181"
                     /coded_by="XM_061155973.1:204..1577"
                     /db_xref="GeneID:133065181"
ORIGIN      
        1 mpwyhssltr eeaerklysg sqtdgkfllr prkepgtyal sliygktvyh ylisqdkagk
       61 ycipegtkfd tlwqlveylk lkadgliycl keacpnssas pgaaaptlpa hpstftqpqr
      121 ridtlnsdgy tpeparlvss ekprtmpmdt svyespysdp eelknkklfl krenllmadi
      181 elgcgnfgsv rqgvyrmrkk qidvaikvlk qstekadkde mmreaqimhq ldnpyivrli
      241 gvcqaealml vmemagggpl hkflagrkee ipvsnvaell hqvsmgmkyl eeknfvhrdl
      301 aarnvllvnr hyakisdfgl skalgaddsy ytarsagkwp lkwyapecin frkfssrsdv
      361 wsygvtmwea fsygqkpykk mkgpevmafi eqgkrmecpp ecppemyklm sdcwtykwed
      421 rpdfaaveqr mrtyyyslat kaeepgacan gveaacp
//
LOCUS       XP_061011957             183 aa            linear   MAM 02-DEC-2023
DEFINITION  chromobox protein homolog 3-like [Dama dama].
ACCESSION   XP_061011957
VERSION     XP_061011957.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155974.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..183
                     /product="chromobox protein homolog 3-like"
                     /calculated_mol_wt=20600
     Region          29..78
                     /region_name="CD_HP1gamma_Cbx3"
                     /note="chromodomain of heterochromatin protein 1 homolog
                     gamma; cd18652"
                     /db_xref="CDD:349299"
     Site            order(29..32,49,51,54,62..63,65..69,72)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349299"
     Region          116..173
                     /region_name="CSD_HP1gamma_Cbx3"
                     /note="chromo shadow domain of heterochromatin protein 1
                     gamma homolog gamma; cd18656"
                     /db_xref="CDD:349303"
     Site            order(127..131,139,148,168,171..172)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349303"
     Site            order(129,167..169,171..172)
                     /site_type="other"
                     /note="putative binding pit [polypeptide binding]"
                     /db_xref="CDD:349303"
     Site            order(154,157,161..162,164..165,168..169)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:349303"
     CDS             1..183
                     /gene="LOC133065183"
                     /coded_by="XM_061155974.1:16..567"
                     /db_xref="GeneID:133065183"
ORIGIN      
        1 masskttlqk mgkkqngksk kveeaepeef vvekvldcrv vngkveyflk wkgftdadnt
       61 wepeenldcp elleaflnsq kagkekdgtk rkslsdsesd dskskkkrda adkprgfarg
      121 ldperiigat dssgelmflm kwkdsdeadl vlakeanmkc pqiviafyee rltwhscped
      181 eaq
//
LOCUS       XP_061011958             284 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C2orf92 homolog isoform X1 [Dama dama].
ACCESSION   XP_061011958
VERSION     XP_061011958.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155975.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..284
                     /product="uncharacterized protein C2orf92 homolog isoform
                     X1"
                     /calculated_mol_wt=31829
     CDS             1..284
                     /gene="C11H2orf92"
                     /coded_by="XM_061155975.1:309..1163"
                     /db_xref="GeneID:133065184"
ORIGIN      
        1 mstrgasngs gvhrarrypv lnsltrlshs ylpryrtfpl dcevkfgqve aqhhtgkcrn
       61 rsnaefssns kildkglakl fgyppqkssr etdfalssnk rdehlaklfd eillqvfskv
      121 pleetraaag rsitkrdtke ratvdgnshe pelffdstdr msnneddptd dqnhnpphve
      181 nisqtlqrls dvpsrgmpcs qllqflqkni ivaavsvvgi avaavlllla llvyvrksrs
      241 lhspadmtyn ifimngktww qksqdkktkk hagkqkqlkl nsgi
//
LOCUS       XP_061011959             230 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C2orf92 homolog isoform X2 [Dama dama].
ACCESSION   XP_061011959
VERSION     XP_061011959.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155976.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..230
                     /product="uncharacterized protein C2orf92 homolog isoform
                     X2"
                     /calculated_mol_wt=25394
     CDS             1..230
                     /gene="C11H2orf92"
                     /coded_by="XM_061155976.1:1730..2422"
                     /db_xref="GeneID:133065184"
ORIGIN      
        1 mepgnfllrf atktpkqltg pgksgpefsp lpsqlwnvrw aqatlkervk agsnaefssn
       61 skildkglak lfeddptddq nhnpphveni sqtlqrlsdh iageqrdqes slfnrdvsdt
      121 qsttinkgkh qeavspdvps rgmpcsqllq flqkniivaa vsvvgiavaa vllllallvy
      181 vrksrslhsp admtynifim ngktwwqksq dkktkkhagk qkqlklnsgi
//
LOCUS       XP_061011960             229 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C2orf92 homolog isoform X3 [Dama dama].
ACCESSION   XP_061011960
VERSION     XP_061011960.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155977.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..229
                     /product="uncharacterized protein C2orf92 homolog isoform
                     X3"
                     /calculated_mol_wt=25623
     CDS             1..229
                     /gene="C11H2orf92"
                     /coded_by="XM_061155977.1:309..998"
                     /db_xref="GeneID:133065184"
ORIGIN      
        1 mstrgasngs gvhrarrypv lnsltrlshs ylpryrtfpl dcevkfgqve aqhhtgkcrn
       61 rsnaefssns kildkglakl fgyppqkssr etdfalssnk rdehlaklfe ddptddqnhn
      121 pphvenisqt lqrlsdvpsr gmpcsqllqf lqkniivaav svvgiavaav llllallvyv
      181 rksrslhspa dmtynifimn gktwwqksqd kktkkhagkq kqlklnsgi
//
LOCUS       XP_061011961             171 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C2orf92 homolog isoform X4 [Dama dama].
ACCESSION   XP_061011961
VERSION     XP_061011961.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155978.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..171
                     /product="uncharacterized protein C2orf92 homolog isoform
                     X4"
                     /calculated_mol_wt=18977
     CDS             1..171
                     /gene="C11H2orf92"
                     /coded_by="XM_061155978.1:1730..2245"
                     /db_xref="GeneID:133065184"
ORIGIN      
        1 mepgnfllrf atktpkqltg pgksgpefsp lpsqlwnvrw aqatlkervk aeddptddqn
       61 hnpphvenis qtlqrlsdvp srgmpcsqll qflqkniiva avsvvgiava avllllallv
      121 yvrksrslhs padmtynifi mngktwwqks qdkktkkhag kqkqlklnsg i
//
LOCUS       XP_061011962             376 aa            linear   MAM 02-DEC-2023
DEFINITION  beta-centractin [Dama dama].
ACCESSION   XP_061011962
VERSION     XP_061011962.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155979.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..376
                     /product="beta-centractin"
                     /calculated_mol_wt=42163
     Region          9..375
                     /region_name="ASKHA_NBD_Arp1"
                     /note="nucleotide-binding domain (NBD) of actin-related
                     protein 1 (Arp1) and similar proteins; cd10216"
                     /db_xref="CDD:466820"
     CDS             1..376
                     /gene="ACTR1B"
                     /coded_by="XM_061155979.1:232..1362"
                     /db_xref="GeneID:133065185"
ORIGIN      
        1 mesydiianq pvvidngsgv ikagfagdqi pkycfpnyvg rpkhmrvmag alegdlfigp
       61 kaeehrglla irypmehgvv rdwndmeriw qyvyskdqlq tfseehpvll teaplnpskn
      121 rekaaevffe tfnvpalfis mqavlslyat grttgvvlds gdgvthavpv yegfamphsi
      181 mrvdiagrdv srylrlllrk egadfhtsae fevvrtiker acylsinpqk dealetekvq
      241 ytlpdgstln vgparfrape llfqpdligd eseglhevlv faihksdmdl rrtlfaniml
      301 sggstlfkgf gdrllsevkk lapkdvkiki sapqerlyst wiggsilasl dtfkkmwvsk
      361 keyeedgsra ihrktf
//
LOCUS       XP_061011963             129 aa            linear   MAM 02-DEC-2023
DEFINITION  cytochrome c oxidase subunit 5B, mitochondrial isoform X1 [Dama
            dama].
ACCESSION   XP_061011963
VERSION     XP_061011963.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155980.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..129
                     /product="cytochrome c oxidase subunit 5B, mitochondrial
                     isoform X1"
                     /calculated_mol_wt=13675
     Region          32..128
                     /region_name="Cyt_c_Oxidase_Vb"
                     /note="Cytochrome c oxidase subunit Vb. Cytochrome c
                     oxidase (CcO), the terminal oxidase in the respiratory
                     chains of eukaryotes and most bacteria, is a multi-chain
                     transmembrane protein located in the inner membrane of
                     mitochondria and the cell membrane of...; cd00924"
                     /db_xref="CDD:238464"
     Site            order(32,35..38,40,43,45,48,62..63,125)
                     /site_type="other"
                     /note="Subunit Vb/III interface [polypeptide binding]"
                     /db_xref="CDD:238464"
     Site            32
                     /site_type="other"
                     /note="Subunit Vb/Va (of dimer complex) interface
                     [polypeptide binding]"
                     /db_xref="CDD:238464"
     Site            32
                     /site_type="other"
                     /note="Subunit Vb/VIa interface [polypeptide binding]"
                     /db_xref="CDD:238464"
     Site            order(43,45)
                     /site_type="other"
                     /note="Subunit Vb/VIIa interface [polypeptide binding]"
                     /db_xref="CDD:238464"
     Site            order(64,67,78,82..83,87..90,92,98..99,102,104,120)
                     /site_type="other"
                     /note="Subunit Vb/I interface [polypeptide binding]"
                     /db_xref="CDD:238464"
     Site            order(91,93,113,116)
                     /site_type="other"
                     /note="Zinc binding site [ion binding]"
                     /db_xref="CDD:238464"
     Site            98
                     /site_type="other"
                     /note="Subunit Vb/VIa (of dimer complex) interface
                     [polypeptide binding]"
                     /db_xref="CDD:238464"
     Site            106
                     /site_type="other"
                     /note="Subunit Vb/IV interface [polypeptide binding]"
                     /db_xref="CDD:238464"
     Site            112..113
                     /site_type="other"
                     /note="Subunit Vb/Va interface [polypeptide binding]"
                     /db_xref="CDD:238464"
     CDS             1..129
                     /gene="LOC133065186"
                     /coded_by="XM_061155980.1:56..445"
                     /db_xref="GeneID:133065186"
ORIGIN      
        1 masrllrgag alasqalrar gpngvsvvrs masgggvptd eeqatglere vmlaarkgqd
       61 pynilapkat sgtkedpnlv psitnkrivg ciceednstv iwfwlhkgea qrcpscgthy
      121 klvphqlah
//
LOCUS       XP_061011964             122 aa            linear   MAM 02-DEC-2023
DEFINITION  cytochrome c oxidase subunit 5B, mitochondrial isoform X2 [Dama
            dama].
ACCESSION   XP_061011964
VERSION     XP_061011964.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155981.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..122
                     /product="cytochrome c oxidase subunit 5B, mitochondrial
                     isoform X2"
                     /calculated_mol_wt=12705
     Region          32..>92
                     /region_name="Cyt_c_Oxidase_Vb"
                     /note="Cytochrome c oxidase subunit Vb. Cytochrome c
                     oxidase (CcO), the terminal oxidase in the respiratory
                     chains of eukaryotes and most bacteria, is a multi-chain
                     transmembrane protein located in the inner membrane of
                     mitochondria and the cell membrane of...; cl00016"
                     /db_xref="CDD:444653"
     Site            order(32,35..38,40,43,45,48,62..63)
                     /site_type="other"
                     /note="Subunit Vb/III interface [polypeptide binding]"
                     /db_xref="CDD:238464"
     Site            32
                     /site_type="other"
                     /note="Subunit Vb/Va (of dimer complex) interface
                     [polypeptide binding]"
                     /db_xref="CDD:238464"
     Site            32
                     /site_type="other"
                     /note="Subunit Vb/VIa interface [polypeptide binding]"
                     /db_xref="CDD:238464"
     Site            order(43,45)
                     /site_type="other"
                     /note="Subunit Vb/VIIa interface [polypeptide binding]"
                     /db_xref="CDD:238464"
     CDS             1..122
                     /gene="LOC133065186"
                     /coded_by="XM_061155981.1:56..424"
                     /db_xref="GeneID:133065186"
ORIGIN      
        1 masrllrgag alasqalrar gpngvsvvrs masgggvptd eeqatglere vmlaarkgqd
       61 pynilapkat sgtkedpnlv psitnkrivg ciyttsgtry tcqngpsfgs lhmqgtenlm
      121 rn
//
LOCUS       XP_061011965             833 aa            linear   MAM 02-DEC-2023
DEFINITION  semaphorin-4C isoform X1 [Dama dama].
ACCESSION   XP_061011965
VERSION     XP_061011965.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155982.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..833
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..833
                     /product="semaphorin-4C isoform X1"
                     /calculated_mol_wt=92489
     Region          42..496
                     /region_name="Sema_4C"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorin 4C (Sema4C); cd11258"
                     /db_xref="CDD:200519"
     Site            order(101..103,161,182,184..185,187,202,205,207,212,244,
                     268..272,274,352..353,388,392,395)
                     /site_type="other"
                     /note="plexin binding site [polypeptide binding]"
                     /db_xref="CDD:200519"
     Site            order(245..246,248,251..253,287,290..292,294,296,319..321,
                     325..326,401,416)
                     /site_type="other"
                     /note="putative homodimer interface [polypeptide binding]"
                     /db_xref="CDD:200519"
     Region          499..>528
                     /region_name="PSI"
                     /note="domain found in Plexins, Semaphorins and Integrins;
                     smart00423"
                     /db_xref="CDD:214655"
     Region          563..647
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          573..577
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          585..589
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          610..614
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          624..629
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          641..644
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..833
                     /gene="SEMA4C"
                     /coded_by="XM_061155982.1:141..2642"
                     /db_xref="GeneID:133065188"
ORIGIN      
        1 maphwavcll vvelwglglg aevwwnlvpr ktvssgelat vvrrfsqtgi qdfltltlte
       61 qtgllyvgar ealfafsvea lelqgviswe apaekkaeci qkgksnqtec fnfirflqpy
      121 ntshlytcgt yafqpkctyi dmltftlers efedgkgkcp ydpakghtgl lvdgelysat
      181 lnnflgtepv ilrnmgphha mkteylafwl nephfvgsay vpesvgsytg dddkvyfffs
      241 eraveydcya eqvvarvarv ckgdvggart lqrkwttflk arlvcsapdw qlyfnrlqal
      301 ytlqdaswhn ttffgvfrar wgdmdlsavc eyqleeiqkv fegpykeyhe qaqkwgrytd
      361 pvptprpgsc innwhrrhgy tsslelpdni lnfikkhplm eeqvrprwgr pllvkknanl
      421 thlvadrvsg ldgatytvlf igtgdgwllk avslgpwvhl ieelqlfdqe pveslvlsrs
      481 kkllfagsrs qlvqlppadc mkyrscadcv lardpycawn tnssrcvavg ghsgslliqh
      541 vtvsdtsnic nfrgskkvrl tpknitvvag tdlvlpcrls snlaharwtf ggrdlpaeqp
      601 gsflydarlq alvvmaaqpr hagayhcfse eqgarlaaeg ylvavvagps vtlearaple
      661 nlglvwlavv algavclvll llvlslrrrl reelekgaka aertlvyple lpkeptsppf
      721 rpgpetdekl wdpvgyyysd gslkivpgha rcqpgggpps pppgipgqpl psptrlhlgg
      781 grnsnangyv rlqlggedrg glghplpela delrrklqqr qplpdsnpee ssv
//
LOCUS       XP_061011966             833 aa            linear   MAM 02-DEC-2023
DEFINITION  semaphorin-4C isoform X1 [Dama dama].
ACCESSION   XP_061011966
VERSION     XP_061011966.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155983.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..833
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..833
                     /product="semaphorin-4C isoform X1"
                     /calculated_mol_wt=92489
     Region          42..496
                     /region_name="Sema_4C"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorin 4C (Sema4C); cd11258"
                     /db_xref="CDD:200519"
     Site            order(101..103,161,182,184..185,187,202,205,207,212,244,
                     268..272,274,352..353,388,392,395)
                     /site_type="other"
                     /note="plexin binding site [polypeptide binding]"
                     /db_xref="CDD:200519"
     Site            order(245..246,248,251..253,287,290..292,294,296,319..321,
                     325..326,401,416)
                     /site_type="other"
                     /note="putative homodimer interface [polypeptide binding]"
                     /db_xref="CDD:200519"
     Region          499..>528
                     /region_name="PSI"
                     /note="domain found in Plexins, Semaphorins and Integrins;
                     smart00423"
                     /db_xref="CDD:214655"
     Region          563..647
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          573..577
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          585..589
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          610..614
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          624..629
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          641..644
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..833
                     /gene="SEMA4C"
                     /coded_by="XM_061155983.1:134..2635"
                     /db_xref="GeneID:133065188"
ORIGIN      
        1 maphwavcll vvelwglglg aevwwnlvpr ktvssgelat vvrrfsqtgi qdfltltlte
       61 qtgllyvgar ealfafsvea lelqgviswe apaekkaeci qkgksnqtec fnfirflqpy
      121 ntshlytcgt yafqpkctyi dmltftlers efedgkgkcp ydpakghtgl lvdgelysat
      181 lnnflgtepv ilrnmgphha mkteylafwl nephfvgsay vpesvgsytg dddkvyfffs
      241 eraveydcya eqvvarvarv ckgdvggart lqrkwttflk arlvcsapdw qlyfnrlqal
      301 ytlqdaswhn ttffgvfrar wgdmdlsavc eyqleeiqkv fegpykeyhe qaqkwgrytd
      361 pvptprpgsc innwhrrhgy tsslelpdni lnfikkhplm eeqvrprwgr pllvkknanl
      421 thlvadrvsg ldgatytvlf igtgdgwllk avslgpwvhl ieelqlfdqe pveslvlsrs
      481 kkllfagsrs qlvqlppadc mkyrscadcv lardpycawn tnssrcvavg ghsgslliqh
      541 vtvsdtsnic nfrgskkvrl tpknitvvag tdlvlpcrls snlaharwtf ggrdlpaeqp
      601 gsflydarlq alvvmaaqpr hagayhcfse eqgarlaaeg ylvavvagps vtlearaple
      661 nlglvwlavv algavclvll llvlslrrrl reelekgaka aertlvyple lpkeptsppf
      721 rpgpetdekl wdpvgyyysd gslkivpgha rcqpgggpps pppgipgqpl psptrlhlgg
      781 grnsnangyv rlqlggedrg glghplpela delrrklqqr qplpdsnpee ssv
//
LOCUS       XP_061011967             833 aa            linear   MAM 02-DEC-2023
DEFINITION  semaphorin-4C isoform X1 [Dama dama].
ACCESSION   XP_061011967
VERSION     XP_061011967.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155984.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..833
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..833
                     /product="semaphorin-4C isoform X1"
                     /calculated_mol_wt=92489
     Region          42..496
                     /region_name="Sema_4C"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorin 4C (Sema4C); cd11258"
                     /db_xref="CDD:200519"
     Site            order(101..103,161,182,184..185,187,202,205,207,212,244,
                     268..272,274,352..353,388,392,395)
                     /site_type="other"
                     /note="plexin binding site [polypeptide binding]"
                     /db_xref="CDD:200519"
     Site            order(245..246,248,251..253,287,290..292,294,296,319..321,
                     325..326,401,416)
                     /site_type="other"
                     /note="putative homodimer interface [polypeptide binding]"
                     /db_xref="CDD:200519"
     Region          499..>528
                     /region_name="PSI"
                     /note="domain found in Plexins, Semaphorins and Integrins;
                     smart00423"
                     /db_xref="CDD:214655"
     Region          563..647
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          573..577
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          585..589
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          610..614
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          624..629
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          641..644
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..833
                     /gene="SEMA4C"
                     /coded_by="XM_061155984.1:59..2560"
                     /db_xref="GeneID:133065188"
ORIGIN      
        1 maphwavcll vvelwglglg aevwwnlvpr ktvssgelat vvrrfsqtgi qdfltltlte
       61 qtgllyvgar ealfafsvea lelqgviswe apaekkaeci qkgksnqtec fnfirflqpy
      121 ntshlytcgt yafqpkctyi dmltftlers efedgkgkcp ydpakghtgl lvdgelysat
      181 lnnflgtepv ilrnmgphha mkteylafwl nephfvgsay vpesvgsytg dddkvyfffs
      241 eraveydcya eqvvarvarv ckgdvggart lqrkwttflk arlvcsapdw qlyfnrlqal
      301 ytlqdaswhn ttffgvfrar wgdmdlsavc eyqleeiqkv fegpykeyhe qaqkwgrytd
      361 pvptprpgsc innwhrrhgy tsslelpdni lnfikkhplm eeqvrprwgr pllvkknanl
      421 thlvadrvsg ldgatytvlf igtgdgwllk avslgpwvhl ieelqlfdqe pveslvlsrs
      481 kkllfagsrs qlvqlppadc mkyrscadcv lardpycawn tnssrcvavg ghsgslliqh
      541 vtvsdtsnic nfrgskkvrl tpknitvvag tdlvlpcrls snlaharwtf ggrdlpaeqp
      601 gsflydarlq alvvmaaqpr hagayhcfse eqgarlaaeg ylvavvagps vtlearaple
      661 nlglvwlavv algavclvll llvlslrrrl reelekgaka aertlvyple lpkeptsppf
      721 rpgpetdekl wdpvgyyysd gslkivpgha rcqpgggpps pppgipgqpl psptrlhlgg
      781 grnsnangyv rlqlggedrg glghplpela delrrklqqr qplpdsnpee ssv
//
LOCUS       XP_061011968             692 aa            linear   MAM 02-DEC-2023
DEFINITION  semaphorin-4C isoform X2 [Dama dama].
ACCESSION   XP_061011968
VERSION     XP_061011968.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155985.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..692
                     /product="semaphorin-4C isoform X2"
                     /calculated_mol_wt=76650
     Region          <1..355
                     /region_name="Sema"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorins and plexins; cl15693"
                     /db_xref="CDD:472829"
     Region          358..>387
                     /region_name="PSI"
                     /note="domain found in Plexins, Semaphorins and Integrins;
                     smart00423"
                     /db_xref="CDD:214655"
     Region          422..506
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          432..436
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          444..448
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          469..473
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          483..488
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          500..503
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..692
                     /gene="SEMA4C"
                     /coded_by="XM_061155985.1:304..2382"
                     /db_xref="GeneID:133065188"
ORIGIN      
        1 mltftlerse fedgkgkcpy dpakghtgll vdgelysatl nnflgtepvi lrnmgphham
       61 kteylafwln ephfvgsayv pesvgsytgd ddkvyfffse raveydcyae qvvarvarvc
      121 kgdvggartl qrkwttflka rlvcsapdwq lyfnrlqaly tlqdaswhnt tffgvfrarw
      181 gdmdlsavce yqleeiqkvf egpykeyheq aqkwgrytdp vptprpgsci nnwhrrhgyt
      241 sslelpdnil nfikkhplme eqvrprwgrp llvkknanlt hlvadrvsgl dgatytvlfi
      301 gtgdgwllka vslgpwvhli eelqlfdqep veslvlsrsk kllfagsrsq lvqlppadcm
      361 kyrscadcvl ardpycawnt nssrcvavgg hsgslliqhv tvsdtsnicn frgskkvrlt
      421 pknitvvagt dlvlpcrlss nlaharwtfg grdlpaeqpg sflydarlqa lvvmaaqprh
      481 agayhcfsee qgarlaaegy lvavvagpsv tlearaplen lglvwlavva lgavclvlll
      541 lvlslrrrlr eelekgakaa ertlvyplel pkeptsppfr pgpetdeklw dpvgyyysdg
      601 slkivpghar cqpgggppsp ppgipgqplp sptrlhlggg rnsnangyvr lqlggedrgg
      661 lghplpelad elrrklqqrq plpdsnpees sv
//
LOCUS       XP_061011969             306 aa            linear   MAM 02-DEC-2023
DEFINITION  ankyrin repeat domain-containing protein 23 [Dama dama].
ACCESSION   XP_061011969
VERSION     XP_061011969.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155986.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..306
                     /product="ankyrin repeat domain-containing protein 23"
                     /calculated_mol_wt=34421
     Region          <116..284
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(146,150..151,154..156,158..159,163,166,175,177,179,
                     183..184,187..189,191..192,196,199,208,210,212,216..217,
                     220..222,224..225,229,232,241)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          146..175
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          177..208
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          210..241
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..306
                     /gene="ANKRD23"
                     /coded_by="XM_061155986.1:26..946"
                     /db_xref="GeneID:133065189"
ORIGIN      
        1 mnfisiqqlv sgervettkl erghgvpdpg gglhswrlgp qeaearerqk ldeekrrrle
       61 rfnssrtnle nladleklvq rrkekrlkrr vppkapqpev kpqpqaqlep vdlevflkaa
      121 aenqealidk yladggdpna hdklhrtalh waclnghcel vnklleagaa vdardlldrt
      181 pvfwacrrgh ldilkqllnr gaqvnardki wstplhvavr tghcdclehl iacgaridaq
      241 dkegdtalhe avrhgryram kllllygagl gvrnaasvtp vqlardwqrg iqealqahvr
      301 hsrtrc
//
LOCUS       XP_061011970             183 aa            linear   MAM 02-DEC-2023
DEFINITION  ankyrin repeat domain-containing protein 39 [Dama dama].
ACCESSION   XP_061011970
VERSION     XP_061011970.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155987.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..183
                     /product="ankyrin repeat domain-containing protein 39"
                     /calculated_mol_wt=19308
     Region          <38..>152
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          64..94
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(65,69..70,73..75,77..78,82,85,94,96,98,102..103,
                     106..108,110..111,115,118,127,129,131,135..136,139..141,
                     143..144,148,151)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          96..127
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..183
                     /gene="ANKRD39"
                     /coded_by="XM_061155987.1:22..573"
                     /db_xref="GeneID:133065190"
ORIGIN      
        1 maaprpcadg pccshpsaap gvqqtldemd fergiwsaal ngdlgrvkyl iqkaadpsqp
       61 dsagytalhy asrnghyavc qfllesgakc daqthggata lhrasycght diarlllshg
      121 snprlvdadg mtslhkaaek ghldicslll qhspalkavr drkarlacdl lpgnsdlrdl
      181 las
//
LOCUS       XP_061011971             704 aa            linear   MAM 02-DEC-2023
DEFINITION  metal transporter CNNM3 [Dama dama].
ACCESSION   XP_061011971
VERSION     XP_061011971.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155988.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..704
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..704
                     /product="metal transporter CNNM3"
                     /calculated_mol_wt=75706
     Region          <12..295
                     /region_name="COG3903"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443109"
     Region          310..439
                     /region_name="CBS_pair_CorC_HlyC_assoc"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains the majority of which are
                     associated with the CorC_HlyC domain; cd04590"
                     /db_xref="CDD:341366"
     Site            order(318,320..322,345..347,410,431,433,435..436,439)
                     /site_type="other"
                     /note="ligand binding site II [chemical binding]"
                     /db_xref="CDD:341366"
     Region          318..384
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341366"
     Site            order(345,359,363..364,367,388,410..412,435)
                     /site_type="other"
                     /note="putative ligand binding site I [chemical binding]"
                     /db_xref="CDD:341366"
     Region          388..439
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341366"
     CDS             1..704
                     /gene="CNNM3"
                     /coded_by="XM_061155988.1:1..2115"
                     /db_xref="GeneID:133065191"
ORIGIN      
        1 maaaaaagrl gwllaalclg naageaapdp rvlgvcleed gaagagwahe gevraapeat
       61 frlrlfgsgf snsswswvap egagcpeeaa altgewrall rlraeaarph sallavrvep
      121 ggsaaeeeap pwalglgaag llalaalarg lqlsalalap aevqvlresg seaeraaarr
      181 leparrwagc algallllas laqaalavll yraagqravp avlgsaglvf lvgevvpaav
      241 sgrwtlalap ralilsrlav lltlpvalpv gqllelaarp grlrervlel argggdpysd
      301 lskgvlpcrt vedvltpled cfmldastvl dfgvlasimq sghtripvye dersnivdml
      361 ylkdlafvdp edctplstit rfynhplhfv fndtkldavl eefkrgkshl aivqkvnneg
      421 egdpfyevlg lvtledviee iikseildes edyrdtiikk kpaslnaplr qkeefslfkv
      481 sdddykvkis pqlllatqrf lsrevdvfsp lrvsekvllh llkhpsvnqe vrfdesdrla
      541 ahhylyqrsr pvdyfililq grveveigke glkfengaft yygvsaltap ssvhqspvss
      601 lqsirydppp epadstrlsa ycpdytvral sdlqfikvtr lqylnallat raqalpqspe
      661 ntellaipgs qtrllgdkaa tapgsnhsrp glpaeespgr npgv
//
LOCUS       XP_061011972             775 aa            linear   MAM 02-DEC-2023
DEFINITION  metal transporter CNNM4 [Dama dama].
ACCESSION   XP_061011972
VERSION     XP_061011972.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155989.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..775
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..775
                     /product="metal transporter CNNM4"
                     /calculated_mol_wt=86473
     Region          182..>513
                     /region_name="TlyC"
                     /note="Hemolysin-related protein, contains CBS domains,
                     UPF0053 family [General function prediction only];
                     COG1253"
                     /db_xref="CDD:440865"
     CDS             1..775
                     /gene="CNNM4"
                     /coded_by="XM_061155989.1:1..2328"
                     /db_xref="GeneID:133065193"
ORIGIN      
        1 mapvggggrp gggpargrll laalvllvll wapgvrgqgg pqrsailgmr ltscskscei
       61 ntdgiisvse gstvnlrlyg qglnsfssnl isftevdnae tfhnstecpe ltkdlvvqkl
      121 vnvsrgdtsg mlvvltkflr rsentklyal ctragvdrpw qrwtdkdsll lmveeagrll
      181 plwlhvliim vllglsgifs glnlglmald pmelrivqnc gtqkerryar kiepirrkgn
      241 yllcslllgn vlvntsltil ldnligsglv avasstigiv ifgeivpqal csrhglavga
      301 ntiiltkffm litfplsypi sklldfflgq eirtvynrek lmemlkvtep yndlvkeeln
      361 miqgalelrt ktvedimtql qdcfmirsda ildfntmsei mesgytripv fedeqsnivd
      421 ilyvkdlafv dpddctplkt itrfynhpvh fvfhdtklda mleefkkgks hlaivqkvnn
      481 egegdpfyev lglvtledvi eeiikseild esdmytdnrs rkrvseknkr dfsafkdadn
      541 elkvkispql llaahrflst evpqfspsli sekillrllk ypdviqelkf dehnkhyvrh
      601 ylytrnkpad yfvlilqgkv eveagkenmk fetgafsyyg tmalssapsd rspshptals
      661 rsaslsypdr setastvpla gssnqfgssi lgqyisdfsv ralmdlqyik itrqqyqngl
      721 lasrmencpq fpldgctlct ensadkaelp ladettnlln ernsllhrts hesai
//
LOCUS       XP_061011973             377 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM178B isoform X1 [Dama dama].
ACCESSION   XP_061011973
VERSION     XP_061011973.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155990.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..377
                     /product="protein FAM178B isoform X1"
                     /calculated_mol_wt=42369
     Region          <12..239
                     /region_name="CANIN"
                     /note="Coiled-coil and Nse Interacting (CANIN) domain;
                     pfam14816"
                     /db_xref="CDD:464331"
     CDS             1..377
                     /gene="FAM178B"
                     /coded_by="XM_061155990.1:216..1349"
                     /db_xref="GeneID:133065194"
ORIGIN      
        1 mpllrwllql ltwppetssr afgllwdlsl dglfrqsggd tslwcpslqe isamfhslga
       61 hspalqplgp tqhagseasr srreqqdtlq emaldsslny ickllpstag gsqcqegtpa
      121 lalsplqflt lcalaqpgay tdqdlldlie llcragldtr lrllprtdlq qlllqlleni
      181 rewpeklrql cwalsrasgh hhnllalvql fldvsprsrq lrgqlsllvm arllnqqesl
      241 plwqekaqls slcqllglmr psslrrylgp etvlpgqeqq pkpsaqldhk vcylchsllt
      301 lagvvvscqd itpdqwgelq llcvqldrhi nthirespqa myrttlkdla aqthirwqel
      361 lahcqpqaqy fslwedv
//
LOCUS       XP_061011974             353 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM178B isoform X2 [Dama dama].
ACCESSION   XP_061011974
VERSION     XP_061011974.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155991.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..353
                     /product="protein FAM178B isoform X2"
                     /calculated_mol_wt=40047
     Region          <12..215
                     /region_name="CANIN"
                     /note="Coiled-coil and Nse Interacting (CANIN) domain;
                     pfam14816"
                     /db_xref="CDD:464331"
     CDS             1..353
                     /gene="FAM178B"
                     /coded_by="XM_061155991.1:213..1274"
                     /db_xref="GeneID:133065194"
ORIGIN      
        1 mpllrwllql ltwppetssr afgllwdlsl dglfrqsggd tslwcpslqe isamfhslga
       61 hspalqplgp tqhagseasr srreqqdtlq emaldsslny ickfltlcal aqpgaytdqd
      121 lldliellcr agldtrlrll prtdlqqlll qllenirewp eklrqlcwal srasghhhnl
      181 lalvqlfldv sprsrqlrgq lsllvmarll nqqeslplwq ekaqlsslcq llglmrpssl
      241 rrylgpetvl pgqeqqpkps aqldhkvcyl chslltlagv vvscqditpd qwgelqllcv
      301 qldrhinthi respqamyrt tlkdlaaqth irwqellahc qpqaqyfslw edv
//
LOCUS       XP_061011975             344 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM178B isoform X3 [Dama dama].
ACCESSION   XP_061011975
VERSION     XP_061011975.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155992.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..344
                     /product="protein FAM178B isoform X3"
                     /calculated_mol_wt=39086
     Region          <12..206
                     /region_name="CANIN"
                     /note="Coiled-coil and Nse Interacting (CANIN) domain;
                     pfam14816"
                     /db_xref="CDD:464331"
     CDS             1..344
                     /gene="FAM178B"
                     /coded_by="XM_061155992.1:213..1247"
                     /db_xref="GeneID:133065194"
ORIGIN      
        1 mpllrwllql ltwppetssr afgllwdlsl dglfrqsggd tslwcpslqe isamfhslga
       61 hspalqplgp tqhagseasr srreqqdtlq emaldsslny ickpgaytdq dlldliellc
      121 ragldtrlrl lprtdlqqll lqllenirew peklrqlcwa lsrasghhhn llalvqlfld
      181 vsprsrqlrg qlsllvmarl lnqqeslplw qekaqlsslc qllglmrpss lrrylgpetv
      241 lpgqeqqpkp saqldhkvcy lchslltlag vvvscqditp dqwgelqllc vqldrhinth
      301 irespqamyr ttlkdlaaqt hirwqellah cqpqaqyfsl wedv
//
LOCUS       XP_061011976             209 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM178B isoform X4 [Dama dama].
ACCESSION   XP_061011976
VERSION     XP_061011976.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155993.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..209
                     /product="protein FAM178B isoform X4"
                     /calculated_mol_wt=23447
     CDS             1..209
                     /gene="FAM178B"
                     /coded_by="XM_061155993.1:21..650"
                     /db_xref="GeneID:133065194"
ORIGIN      
        1 mereekrgss qpsalcspac rrprpwsqpg rsclpgrllg lraaeralcl hscepragrt
       61 vletirrlgr pergstalvl lsslcqllgl mrpsslrryl gpetvlpgqe qqpkpsaqld
      121 hkvcylchsl ltlagvvvsc qditpdqwge lqllcvqldr hinthiresp qamyrttlkd
      181 laaqthirwq ellahcqpqa qyfslwedv
//
LOCUS       XP_061011977             167 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM178B isoform X5 [Dama dama].
ACCESSION   XP_061011977
VERSION     XP_061011977.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155994.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..167
                     /product="protein FAM178B isoform X5"
                     /calculated_mol_wt=19054
     CDS             1..167
                     /gene="FAM178B"
                     /coded_by="XM_061155994.1:2852..3355"
                     /db_xref="GeneID:133065194"
ORIGIN      
        1 mrvpghetrq lrgqlsllvm arllnqqesl plwqekaqls slcqllglmr psslrrylgp
       61 etvlpgqeqq pkpsaqldhk vcylchsllt lagvvvscqd itpdqwgelq llcvqldrhi
      121 nthirespqa myrttlkdla aqthirwqel lahcqpqaqy fslwedv
//
LOCUS       XP_061011978             119 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM178B isoform X6 [Dama dama].
ACCESSION   XP_061011978
VERSION     XP_061011978.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155995.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..119
                     /product="protein FAM178B isoform X6"
                     /calculated_mol_wt=13588
     CDS             1..119
                     /gene="FAM178B"
                     /coded_by="XM_061155995.1:64..423"
                     /db_xref="GeneID:133065194"
ORIGIN      
        1 mrpsslrryl gpetvlpgqe qqpkpsaqld hkvcylchsl ltlagvvvsc qditpdqwge
       61 lqllcvqldr hinthiresp qamyrttlkd laaqthirwq ellahcqpqa qyfslwedv
//
LOCUS       XP_061011979             119 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM178B isoform X6 [Dama dama].
ACCESSION   XP_061011979
VERSION     XP_061011979.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155996.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..119
                     /product="protein FAM178B isoform X6"
                     /calculated_mol_wt=13588
     CDS             1..119
                     /gene="FAM178B"
                     /coded_by="XM_061155996.1:73..432"
                     /db_xref="GeneID:133065194"
ORIGIN      
        1 mrpsslrryl gpetvlpgqe qqpkpsaqld hkvcylchsl ltlagvvvsc qditpdqwge
       61 lqllcvqldr hinthiresp qamyrttlkd laaqthirwq ellahcqpqa qyfslwedv
//
LOCUS       XP_061011980             359 aa            linear   MAM 02-DEC-2023
DEFINITION  VIP36-like protein isoform X1 [Dama dama].
ACCESSION   XP_061011980
VERSION     XP_061011980.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155997.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..359
                     /product="VIP36-like protein isoform X1"
                     /calculated_mol_wt=41174
     Region          50..309
                     /region_name="lectin_L-type"
                     /note="legume lectins; cl14058"
                     /db_xref="CDD:472686"
     Site            order(55..56,58,71,100,103,209,225,234,236..237,250)
                     /site_type="other"
                     /note="homotetramer interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:173886"
     Site            order(55..58,71,100,102)
                     /site_type="other"
                     /note="homodimer interaction site [polypeptide binding]"
                     /db_xref="CDD:173886"
     Site            order(128,269)
                     /site_type="other"
                     /note="carbohydrate binding site [chemical binding]"
                     /db_xref="CDD:173886"
     Site            order(157,159,185)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:173886"
     CDS             1..359
                     /gene="LMAN2L"
                     /coded_by="XM_061155997.1:6..1085"
                     /db_xref="GeneID:133065195"
ORIGIN      
        1 mavalapsgw wrrwrrrlsa revsrmllll lllgsgqgpr qvgagqtfey lkrehslskp
       61 yqgvgtssss lwnlmgnamv mtqyirltpd mqskqgalwn rvpcflrdwe lqvhfrihgq
      121 gkknlhgdgl aiwytkdrmq pgpvfgnmdk fvglgvfvdt ypneekqqea qkrryspgvq
      181 rvfpyisamv nngslsydhe rdgrptelgg ctaivrnlhy dtflviryvk rhltimmdid
      241 gkhewrdcie vpgvrlprgy yfgtssitgd lsdnhdvisl klfeltvert peeeklhrdv
      301 flpsvdnmkl pemtaplppl sglalflivf fslvfsvfai vigiilynkw qdqsrkrfy
//
LOCUS       XP_061011981             348 aa            linear   MAM 02-DEC-2023
DEFINITION  VIP36-like protein isoform X2 [Dama dama].
ACCESSION   XP_061011981
VERSION     XP_061011981.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155998.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..348
                     /product="VIP36-like protein isoform X2"
                     /calculated_mol_wt=39902
     Region          50..298
                     /region_name="lectin_L-type"
                     /note="legume lectins; cl14058"
                     /db_xref="CDD:472686"
     Site            order(55..56,58,71,100,103,198,214,223,225..226,239)
                     /site_type="other"
                     /note="homotetramer interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:173886"
     Site            order(55..58,71,100,102)
                     /site_type="other"
                     /note="homodimer interaction site [polypeptide binding]"
                     /db_xref="CDD:173886"
     Site            order(128,258)
                     /site_type="other"
                     /note="carbohydrate binding site [chemical binding]"
                     /db_xref="CDD:173886"
     Site            order(157,159,174)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:173886"
     CDS             1..348
                     /gene="LMAN2L"
                     /coded_by="XM_061155998.1:4..1050"
                     /db_xref="GeneID:133065195"
ORIGIN      
        1 mavalapsgw wrrwrrrlsa revsrmllll lllgsgqgpr qvgagqtfey lkrehslskp
       61 yqgvgtssss lwnlmgnamv mtqyirltpd mqskqgalwn rvpcflrdwe lqvhfrihgq
      121 gkknlhgdgl aiwytkdrmq pgpvfgnmdk fvglgvfvdt ypneekqqer vfpyisamvn
      181 ngslsydher dgrptelggc taivrnlhyd tflviryvkr hltimmdidg khewrdciev
      241 pgvrlprgyy fgtssitgdl sdnhdvislk lfeltvertp eeeklhrdvf lpsvdnmklp
      301 emtaplppls glalflivff slvfsvfaiv igiilynkwq dqsrkrfy
//
LOCUS       XP_061011982             342 aa            linear   MAM 02-DEC-2023
DEFINITION  VIP36-like protein isoform X3 [Dama dama].
ACCESSION   XP_061011982
VERSION     XP_061011982.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061155999.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..342
                     /product="VIP36-like protein isoform X3"
                     /calculated_mol_wt=38843
     Region          50..309
                     /region_name="lectin_L-type"
                     /note="legume lectins; cl14058"
                     /db_xref="CDD:472686"
     Site            order(55..56,58,71,100,103,209,225,234,236..237,250)
                     /site_type="other"
                     /note="homotetramer interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:173889"
     Site            order(55..58,71,100,102)
                     /site_type="other"
                     /note="homodimer interaction site [polypeptide binding]"
                     /db_xref="CDD:173889"
     Site            order(128,269)
                     /site_type="other"
                     /note="carbohydrate binding site [chemical binding]"
                     /db_xref="CDD:173889"
     Site            order(157,159,185)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:173889"
     CDS             1..342
                     /gene="LMAN2L"
                     /coded_by="XM_061155999.1:4..1032"
                     /db_xref="GeneID:133065195"
ORIGIN      
        1 mavalapsgw wrrwrrrlsa revsrmllll lllgsgqgpr qvgagqtfey lkrehslskp
       61 yqgvgtssss lwnlmgnamv mtqyirltpd mqskqgalwn rvpcflrdwe lqvhfrihgq
      121 gkknlhgdgl aiwytkdrmq pgpvfgnmdk fvglgvfvdt ypneekqqea qkrryspgvq
      181 rvfpyisamv nngslsydhe rdgrptelgg ctaivrnlhy dtflviryvk rhltimmdid
      241 gkhewrdcie vpgvrlprgy yfgtssitgd lsdnhdvisl klfeltvert peeeklhrdv
      301 flpsvdnmkl pesehrgpgk gphgqpagtr vgsvstewpp qp
//
LOCUS       XP_061011983             341 aa            linear   MAM 02-DEC-2023
DEFINITION  VIP36-like protein isoform X4 [Dama dama].
ACCESSION   XP_061011983
VERSION     XP_061011983.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156000.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..341
                     /product="VIP36-like protein isoform X4"
                     /calculated_mol_wt=39121
     Region          50..309
                     /region_name="lectin_L-type"
                     /note="legume lectins; cl14058"
                     /db_xref="CDD:472686"
     Site            order(55..56,58,71,100,103,209,225,234,236..237,250)
                     /site_type="other"
                     /note="homotetramer interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:173889"
     Site            order(55..58,71,100,102)
                     /site_type="other"
                     /note="homodimer interaction site [polypeptide binding]"
                     /db_xref="CDD:173889"
     Site            order(128,269)
                     /site_type="other"
                     /note="carbohydrate binding site [chemical binding]"
                     /db_xref="CDD:173889"
     Site            order(157,159,185)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:173889"
     CDS             1..341
                     /gene="LMAN2L"
                     /coded_by="XM_061156000.1:4..1029"
                     /db_xref="GeneID:133065195"
ORIGIN      
        1 mavalapsgw wrrwrrrlsa revsrmllll lllgsgqgpr qvgagqtfey lkrehslskp
       61 yqgvgtssss lwnlmgnamv mtqyirltpd mqskqgalwn rvpcflrdwe lqvhfrihgq
      121 gkknlhgdgl aiwytkdrmq pgpvfgnmdk fvglgvfvdt ypneekqqea qkrryspgvq
      181 rvfpyisamv nngslsydhe rdgrptelgg ctaivrnlhy dtflviryvk rhltimmdid
      241 gkhewrdcie vpgvrlprgy yfgtssitgd lsdnhdvisl klfeltvert peeeklhrdv
      301 flpsvdnmkl perpeseafl lsgprnldlc gcpweareeh r
//
LOCUS       XP_061011984             339 aa            linear   MAM 02-DEC-2023
DEFINITION  VIP36-like protein isoform X5 [Dama dama].
ACCESSION   XP_061011984
VERSION     XP_061011984.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156001.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..339
                     /product="VIP36-like protein isoform X5"
                     /calculated_mol_wt=38620
     Region          50..289
                     /region_name="lectin_L-type"
                     /note="legume lectins; cl14058"
                     /db_xref="CDD:472686"
     Site            order(55..56,58,71,100,103,189,205,214,216..217,230)
                     /site_type="other"
                     /note="homotetramer interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:173889"
     Site            order(55..58,71,100,102)
                     /site_type="other"
                     /note="homodimer interaction site [polypeptide binding]"
                     /db_xref="CDD:173889"
     Site            order(128,249)
                     /site_type="other"
                     /note="carbohydrate binding site [chemical binding]"
                     /db_xref="CDD:173889"
     CDS             1..339
                     /gene="LMAN2L"
                     /coded_by="XM_061156001.1:4..1023"
                     /db_xref="GeneID:133065195"
ORIGIN      
        1 mavalapsgw wrrwrrrlsa revsrmllll lllgsgqgpr qvgagqtfey lkrehslskp
       61 yqgvgtssss lwnlmgnamv mtqyirltpd mqskqgalwn rvpcflrdwe lqvhfrihgq
      121 gkknlhgdgl aiwytkdrmq pgvparassp psafpplpsq rvfpyisamv nngslsydhe
      181 rdgrptelgg ctaivrnlhy dtflviryvk rhltimmdid gkhewrdcie vpgvrlprgy
      241 yfgtssitgd lsdnhdvisl klfeltvert peeeklhrdv flpsvdnmkl pemtaplppl
      301 sglalflivf fslvfsvfai vigiilynkw qdqsrkrfy
//
LOCUS       XP_061011985             285 aa            linear   MAM 02-DEC-2023
DEFINITION  VIP36-like protein isoform X6 [Dama dama].
ACCESSION   XP_061011985
VERSION     XP_061011985.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156002.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..285
                     /product="VIP36-like protein isoform X6"
                     /calculated_mol_wt=32836
     Region          2..235
                     /region_name="lectin_L-type"
                     /note="legume lectins; cl14058"
                     /db_xref="CDD:472686"
     Site            order(54,195)
                     /site_type="other"
                     /note="carbohydrate binding site [chemical binding]"
                     /db_xref="CDD:173886"
     Site            order(83,85,111)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:173886"
     CDS             1..285
                     /gene="LMAN2L"
                     /coded_by="XM_061156002.1:159..1016"
                     /db_xref="GeneID:133065195"
ORIGIN      
        1 mgnamvmtqy irltpdmqsk qgalwnrvpc flrdwelqvh frihgqgkkn lhgdglaiwy
       61 tkdrmqpgpv fgnmdkfvgl gvfvdtypne ekqqeaqkrr yspgvqrvfp yisamvnngs
      121 lsydherdgr ptelggctai vrnlhydtfl viryvkrhlt immdidgkhe wrdcievpgv
      181 rlprgyyfgt ssitgdlsdn hdvislklfe ltvertpeee klhrdvflps vdnmklpemt
      241 aplpplsgla lflivffslv fsvfaivigi ilynkwqdqs rkrfy
//
LOCUS       XP_061011986             221 aa            linear   MAM 02-DEC-2023
DEFINITION  VIP36-like protein isoform X7 [Dama dama].
ACCESSION   XP_061011986
VERSION     XP_061011986.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156003.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..221
                     /product="VIP36-like protein isoform X7"
                     /calculated_mol_wt=25295
     Region          <1..171
                     /region_name="lectin_L-type"
                     /note="legume lectins; cl14058"
                     /db_xref="CDD:472686"
     Site            order(19,21,47)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:173886"
     CDS             1..221
                     /gene="LMAN2L"
                     /coded_by="XM_061156003.1:331..996"
                     /db_xref="GeneID:133065195"
ORIGIN      
        1 mqpgpvfgnm dkfvglgvfv dtypneekqq eaqkrryspg vqrvfpyisa mvnngslsyd
       61 herdgrptel ggctaivrnl hydtflviry vkrhltimmd idgkhewrdc ievpgvrlpr
      121 gyyfgtssit gdlsdnhdvi slklfeltve rtpeeeklhr dvflpsvdnm klpemtaplp
      181 plsglalfli vffslvfsvf aivigiilyn kwqdqsrkrf y
//
LOCUS       XP_061011987             142 aa            linear   MAM 02-DEC-2023
DEFINITION  SCAN domain-containing protein 1-like [Dama dama].
ACCESSION   XP_061011987
VERSION     XP_061011987.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156004.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..142
                     /product="SCAN domain-containing protein 1-like"
                     /calculated_mol_wt=16177
     Region          10..>85
                     /region_name="PLN02328"
                     /note="lysine-specific histone demethylase 1 homolog"
                     /db_xref="CDD:215187"
     Region          67..>136
                     /region_name="SCAN"
                     /note="SCAN domain; pfam02023"
                     /db_xref="CDD:460417"
     CDS             1..142
                     /gene="LOC133065198"
                     /coded_by="XM_061156004.1:116..544"
                     /db_xref="GeneID:133065198"
ORIGIN      
        1 metegypemq rdgevqndei rsppnemaee pegilvappq vqvpaespde dseddletvp
       61 lrrplnpaas rqrfrefrye daagprdvlr hlqelagqwl rpdihtkeqi vemlvqeqfq
      121 avlpeelraw alrcqpgvri tg
//
LOCUS       XP_061011988             988 aa            linear   MAM 02-DEC-2023
DEFINITION  KAT8 regulatory NSL complex subunit 3 isoform X1 [Dama dama].
ACCESSION   XP_061011988
VERSION     XP_061011988.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156005.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..988
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..988
                     /product="KAT8 regulatory NSL complex subunit 3 isoform
                     X1"
                     /calculated_mol_wt=104345
     Region          <323..472
                     /region_name="COG3571"
                     /note="Predicted hydrolase of the alpha/beta-hydrolase
                     fold [General function prediction only]"
                     /db_xref="CDD:442792"
     Region          <760..926
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..988
                     /gene="KANSL3"
                     /coded_by="XM_061156005.1:422..3388"
                     /db_xref="GeneID:133065199"
ORIGIN      
        1 mahrggerdf qtsarrmgts llfqlsvher eldlvfldhs yakpwsahpd assarptrml
       61 fvtprrqhes tiesdvpidv etvistpvpl ydnqkarsvm necerhvifa rtdadapppp
      121 edweehvnrt gwtlaqnklf nkilkalqsd rlarlanega cnepvlrrva vdkcarrvrq
      181 alasvswdtk liqwlhttlv etlslpmlaa yldalqtlkg kiptlidrml vssntktgaa
      241 gaealslllk rpwdpavgvl shnkpsklpg spliliassg psssvfptsr rhrfwqsqls
      301 clgkvipvat hllnngsgvg vlqclehmvg avrskvlevh ghfphrpiil igwntgalva
      361 chvsvmeyvt avvclgfpll tvdgprgdvd dplldmktpv lfvigqnslq chpeamedfr
      421 ekiraenslv vvggaddnlr iskakkkseg ltqsmvdrci qdeivdfltg vltrteghmg
      481 seprdqdaek kkkprdmarr dlafevserg srpaspaakl paspsgsedl ssvsssptss
      541 pktkvttvas sqkssqigst qllkrhvqrt eavlthrqaq vpisseqtee aekeelrvql
      601 krhhpsspls gsktckrpki kvslisqgda aggpctpssg gapeaaggkp ltmtlgqast
      661 gateltglla taksnasegg vsasqassvv sssatpsalh tlqsrlvvps pggslpgaas
      721 assllqglsf slqdisskts vlpaspspgp apqatgvklp tpmqslgait tgastivrti
      781 pvattlsslg atpggkptai hqlltnggla klasslpgla qisnqasglk vpttitltlr
      841 gqpsrittls pvgtgaapse eptsqalpsn sqappvgttc aptphmwqvn rrahqedsaa
      901 apqvgtqhqg rrlqrpactl sprsaadscs asmwlssgnw itpqcaallp hvptggtras
      961 pslsasdsgl hhgegnswls pdstspvg
//
LOCUS       XP_061011989             988 aa            linear   MAM 02-DEC-2023
DEFINITION  KAT8 regulatory NSL complex subunit 3 isoform X1 [Dama dama].
ACCESSION   XP_061011989
VERSION     XP_061011989.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156006.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..988
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..988
                     /product="KAT8 regulatory NSL complex subunit 3 isoform
                     X1"
                     /calculated_mol_wt=104345
     Region          <323..472
                     /region_name="COG3571"
                     /note="Predicted hydrolase of the alpha/beta-hydrolase
                     fold [General function prediction only]"
                     /db_xref="CDD:442792"
     Region          <760..926
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..988
                     /gene="KANSL3"
                     /coded_by="XM_061156006.1:128..3094"
                     /db_xref="GeneID:133065199"
ORIGIN      
        1 mahrggerdf qtsarrmgts llfqlsvher eldlvfldhs yakpwsahpd assarptrml
       61 fvtprrqhes tiesdvpidv etvistpvpl ydnqkarsvm necerhvifa rtdadapppp
      121 edweehvnrt gwtlaqnklf nkilkalqsd rlarlanega cnepvlrrva vdkcarrvrq
      181 alasvswdtk liqwlhttlv etlslpmlaa yldalqtlkg kiptlidrml vssntktgaa
      241 gaealslllk rpwdpavgvl shnkpsklpg spliliassg psssvfptsr rhrfwqsqls
      301 clgkvipvat hllnngsgvg vlqclehmvg avrskvlevh ghfphrpiil igwntgalva
      361 chvsvmeyvt avvclgfpll tvdgprgdvd dplldmktpv lfvigqnslq chpeamedfr
      421 ekiraenslv vvggaddnlr iskakkkseg ltqsmvdrci qdeivdfltg vltrteghmg
      481 seprdqdaek kkkprdmarr dlafevserg srpaspaakl paspsgsedl ssvsssptss
      541 pktkvttvas sqkssqigst qllkrhvqrt eavlthrqaq vpisseqtee aekeelrvql
      601 krhhpsspls gsktckrpki kvslisqgda aggpctpssg gapeaaggkp ltmtlgqast
      661 gateltglla taksnasegg vsasqassvv sssatpsalh tlqsrlvvps pggslpgaas
      721 assllqglsf slqdisskts vlpaspspgp apqatgvklp tpmqslgait tgastivrti
      781 pvattlsslg atpggkptai hqlltnggla klasslpgla qisnqasglk vpttitltlr
      841 gqpsrittls pvgtgaapse eptsqalpsn sqappvgttc aptphmwqvn rrahqedsaa
      901 apqvgtqhqg rrlqrpactl sprsaadscs asmwlssgnw itpqcaallp hvptggtras
      961 pslsasdsgl hhgegnswls pdstspvg
//
LOCUS       XP_061011990             903 aa            linear   MAM 02-DEC-2023
DEFINITION  KAT8 regulatory NSL complex subunit 3 isoform X2 [Dama dama].
ACCESSION   XP_061011990
VERSION     XP_061011990.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156007.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..903
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..903
                     /product="KAT8 regulatory NSL complex subunit 3 isoform
                     X2"
                     /calculated_mol_wt=95579
     Region          <323..472
                     /region_name="COG3571"
                     /note="Predicted hydrolase of the alpha/beta-hydrolase
                     fold [General function prediction only]"
                     /db_xref="CDD:442792"
     CDS             1..903
                     /gene="KANSL3"
                     /coded_by="XM_061156007.1:418..3129"
                     /db_xref="GeneID:133065199"
ORIGIN      
        1 mahrggerdf qtsarrmgts llfqlsvher eldlvfldhs yakpwsahpd assarptrml
       61 fvtprrqhes tiesdvpidv etvistpvpl ydnqkarsvm necerhvifa rtdadapppp
      121 edweehvnrt gwtlaqnklf nkilkalqsd rlarlanega cnepvlrrva vdkcarrvrq
      181 alasvswdtk liqwlhttlv etlslpmlaa yldalqtlkg kiptlidrml vssntktgaa
      241 gaealslllk rpwdpavgvl shnkpsklpg spliliassg psssvfptsr rhrfwqsqls
      301 clgkvipvat hllnngsgvg vlqclehmvg avrskvlevh ghfphrpiil igwntgalva
      361 chvsvmeyvt avvclgfpll tvdgprgdvd dplldmktpv lfvigqnslq chpeamedfr
      421 ekiraenslv vvggaddnlr iskakkkseg ltqsmvdrci qdeivdfltg vltrteghmg
      481 seprdqdaek kkkprdmarr dlafevserg srpaspaakl paspsgsedl ssvsssptss
      541 pktkvttvas sqkssqigst qllkrhvqrt eavlthrqaq vpisseqtee aekeelrvql
      601 krhhpsspls gsktckrpki kvslisqgda aggpctpssg gapeaaggkp ltmtlgqast
      661 gateltglla taksnasegg vsasqassvv sssatpsalh tlqsrlvvps pggslpgaas
      721 assllqglsf slqdisskts vlpaspspgp apqatgvklp tpmqslgait tgastivrti
      781 pvattlsslg atpggkptai hqlltnggla klasslpgla qisnqasglk vpttitltlr
      841 gqpsrittls pvgtgaapse eptsqalpsn sqadslptep sgspklcypp palsnhqiqp
      901 mma
//
LOCUS       XP_061011991             888 aa            linear   MAM 02-DEC-2023
DEFINITION  KAT8 regulatory NSL complex subunit 3 isoform X3 [Dama dama].
ACCESSION   XP_061011991
VERSION     XP_061011991.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156008.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..888
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..888
                     /product="KAT8 regulatory NSL complex subunit 3 isoform
                     X3"
                     /calculated_mol_wt=94044
     Region          <323..472
                     /region_name="COG3571"
                     /note="Predicted hydrolase of the alpha/beta-hydrolase
                     fold [General function prediction only]"
                     /db_xref="CDD:442792"
     CDS             1..888
                     /gene="KANSL3"
                     /coded_by="XM_061156008.1:417..3083"
                     /db_xref="GeneID:133065199"
ORIGIN      
        1 mahrggerdf qtsarrmgts llfqlsvher eldlvfldhs yakpwsahpd assarptrml
       61 fvtprrqhes tiesdvpidv etvistpvpl ydnqkarsvm necerhvifa rtdadapppp
      121 edweehvnrt gwtlaqnklf nkilkalqsd rlarlanega cnepvlrrva vdkcarrvrq
      181 alasvswdtk liqwlhttlv etlslpmlaa yldalqtlkg kiptlidrml vssntktgaa
      241 gaealslllk rpwdpavgvl shnkpsklpg spliliassg psssvfptsr rhrfwqsqls
      301 clgkvipvat hllnngsgvg vlqclehmvg avrskvlevh ghfphrpiil igwntgalva
      361 chvsvmeyvt avvclgfpll tvdgprgdvd dplldmktpv lfvigqnslq chpeamedfr
      421 ekiraenslv vvggaddnlr iskakkkseg ltqsmvdrci qdeivdfltg vltrteghmg
      481 seprdqdaek kkkprdmarr dlafevserg srpaspaakl paspsgsedl ssvsssptss
      541 pktkvttvas sqkssqigst qllkrhvqrt eavlthrqaq vpisseqtee aekeelrvql
      601 krhhpsspls gsktckrpki kvslisqgda aggpctpssg gapeaaggkp ltmtlgqast
      661 gateltglla taksnasegg vsasqassvv sssatpsalh tlqsrlvvps pggslpgaas
      721 assllqglsf slqdisskts vlpaspspgp apqatgvklp tpmqslgait tgastivrti
      781 pvattlsslg atpggkptai hqlltnggla klasslpgla qisnqasglk vpttitltlr
      841 gqpsrittls pvgtgaapse eptsqalpsn sqlssgldlr vlcnpear
//
LOCUS       XP_061011992             878 aa            linear   MAM 02-DEC-2023
DEFINITION  KAT8 regulatory NSL complex subunit 3 isoform X4 [Dama dama].
ACCESSION   XP_061011992
VERSION     XP_061011992.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156009.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..878
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..878
                     /product="KAT8 regulatory NSL complex subunit 3 isoform
                     X4"
                     /calculated_mol_wt=92950
     Region          <323..472
                     /region_name="COG3571"
                     /note="Predicted hydrolase of the alpha/beta-hydrolase
                     fold [General function prediction only]"
                     /db_xref="CDD:442792"
     CDS             1..878
                     /gene="KANSL3"
                     /coded_by="XM_061156009.1:416..3052"
                     /db_xref="GeneID:133065199"
ORIGIN      
        1 mahrggerdf qtsarrmgts llfqlsvher eldlvfldhs yakpwsahpd assarptrml
       61 fvtprrqhes tiesdvpidv etvistpvpl ydnqkarsvm necerhvifa rtdadapppp
      121 edweehvnrt gwtlaqnklf nkilkalqsd rlarlanega cnepvlrrva vdkcarrvrq
      181 alasvswdtk liqwlhttlv etlslpmlaa yldalqtlkg kiptlidrml vssntktgaa
      241 gaealslllk rpwdpavgvl shnkpsklpg spliliassg psssvfptsr rhrfwqsqls
      301 clgkvipvat hllnngsgvg vlqclehmvg avrskvlevh ghfphrpiil igwntgalva
      361 chvsvmeyvt avvclgfpll tvdgprgdvd dplldmktpv lfvigqnslq chpeamedfr
      421 ekiraenslv vvggaddnlr iskakkkseg ltqsmvdrci qdeivdfltg vltrteghmg
      481 seprdqdaek kkkprdmarr dlafevserg srpaspaakl paspsgsedl ssvsssptss
      541 pktkvttvas sqkssqigst qllkrhvqrt eavlthrqaq vpisseqtee aekeelrvql
      601 krhhpsspls gsktckrpki kvslisqgda aggpctpssg gapeaaggkp ltmtlgqast
      661 gateltglla taksnasegg vsasqassvv sssatpsalh tlqsrlvvps pggslpgaas
      721 assllqglsf slqdisskts vlpaspspgp apqatgvklp tpmqslgait tgastivrti
      781 pvattlsslg atpggkptai hqlltnggla klasslpgla qisnqasglk vpttitltlr
      841 gqpsrittls pvgtgaapse eptsqalpsn sqrlppap
//
LOCUS       XP_061011993             904 aa            linear   MAM 02-DEC-2023
DEFINITION  KAT8 regulatory NSL complex subunit 3 isoform X5 [Dama dama].
ACCESSION   XP_061011993
VERSION     XP_061011993.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156010.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..904
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..904
                     /product="KAT8 regulatory NSL complex subunit 3 isoform
                     X5"
                     /calculated_mol_wt=95772
     Region          <323..472
                     /region_name="COG3571"
                     /note="Predicted hydrolase of the alpha/beta-hydrolase
                     fold [General function prediction only]"
                     /db_xref="CDD:442792"
     CDS             1..904
                     /gene="KANSL3"
                     /coded_by="XM_061156010.1:420..3134"
                     /db_xref="GeneID:133065199"
ORIGIN      
        1 mahrggerdf qtsarrmgts llfqlsvher eldlvfldhs yakpwsahpd assarptrml
       61 fvtprrqhes tiesdvpidv etvistpvpl ydnqkarsvm necerhvifa rtdadapppp
      121 edweehvnrt gwtlaqnklf nkilkalqsd rlarlanega cnepvlrrva vdkcarrvrq
      181 alasvswdtk liqwlhttlv etlslpmlaa yldalqtlkg kiptlidrml vssntktgaa
      241 gaealslllk rpwdpavgvl shnkpsklpg spliliassg psssvfptsr rhrfwqsqls
      301 clgkvipvat hllnngsgvg vlqclehmvg avrskvlevh ghfphrpiil igwntgalva
      361 chvsvmeyvt avvclgfpll tvdgprgdvd dplldmktpv lfvigqnslq chpeamedfr
      421 ekiraenslv vvggaddnlr iskakkkseg ltqsmvdrci qdeivdfltg vltrteghmg
      481 seprdqdaek kkkprdmarr dlafevserg srpaspaakl paspsgsedl ssvsssptss
      541 pktkvttvas sqkssqigst qllkrhvqrt eavlthrqaq aqfaaflkqn mlvrkalppg
      601 tssclfvpis seqteeaeke elrvqlkrhh pssplsgskt ckrpkikvsl isqgdaaggp
      661 ctpssggape aaggkpltmt lgqastgate ltgllataks naseggvsas qassvvsssa
      721 tpsalhtlqs rlvvpspggs lpgaasassl lqglsfslqd issktsvlpa spspgpapqa
      781 tgvklptpmq slgaittgas tivrtipvat tlsslgatpg gkptaihqll tngglaklas
      841 slpglaqisn qasglkvptt itltlrgqps rittlspvgt gaapseepts qalpsnsqrl
      901 ppap
//
LOCUS       XP_061011994             593 aa            linear   MAM 02-DEC-2023
DEFINITION  AT-rich interactive domain-containing protein 5A isoform X1 [Dama
            dama].
ACCESSION   XP_061011994
VERSION     XP_061011994.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156011.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..593
                     /product="AT-rich interactive domain-containing protein 5A
                     isoform X1"
                     /calculated_mol_wt=64134
     Region          58..141
                     /region_name="ARID"
                     /note="ARID/BRIGHT DNA binding domain family; cl28902"
                     /db_xref="CDD:355778"
     Site            order(76..82,107,109..110,113,124,126..128,130)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350648"
     CDS             1..593
                     /gene="ARID5A"
                     /coded_by="XM_061156011.1:98..1879"
                     /db_xref="GeneID:133065201"
ORIGIN      
        1 mappvkgkrk qseegepldp paspqpdgep srsqspvhle eppeagrere eeqeeeqafl
       61 vslykfmker rtpiervphl gfkqinlwki ykaveklgay elvtgrrlwk nvydelggsp
      121 gstsaatctr rhyerlvlpy vrhlkgeddk plppskprkq ykmakeprgd egaperpkkv
      181 keekrvgqlm pgktktdapd larlpsqetp rdgveqrgpa sgpslpfvga sgcpeaykrl
      241 lssfycrgth gimsplakkk llaqvskaea lqcqeegcrh gaggepqasp avppvespqs
      301 pggpaensrh rltplegrqa srgslweetq asprpsapvf tgcfhaypse vlkpvsqhpr
      361 dlfpslkdrv llgppakeeg lpakepplvw ggdasrpsaf hkgssrkgsl ypkpkacwvs
      421 pmtkvpaesp vplptfpssp glghkrslae egsvhggkkl ravspflkea naqecgtkpg
      481 gpdlavscll gpalpeayrg tmlrcplnft gtlgplkgqa tlpfsplvip afpahllaat
      541 apspmttglm hlppasfdga lchrlcpass pwhmppatay taphfsfhln tkl
//
LOCUS       XP_061011995             461 aa            linear   MAM 02-DEC-2023
DEFINITION  AT-rich interactive domain-containing protein 5A isoform X2 [Dama
            dama].
ACCESSION   XP_061011995
VERSION     XP_061011995.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156012.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..461
                     /product="AT-rich interactive domain-containing protein 5A
                     isoform X2"
                     /calculated_mol_wt=49125
     CDS             1..461
                     /gene="ARID5A"
                     /coded_by="XM_061156012.1:16..1401"
                     /db_xref="GeneID:133065201"
ORIGIN      
        1 mnwlvlpyvr hlkgeddkpl ppskprkqyk makeprgdeg aperpkkvke ekrvgqlmpg
       61 ktktdapdla rlpsqetprd gveqrgpasg pslpfvgasg cpeaykrlls sfycrgthgi
      121 msplakkkll aqvskaealq cqeegcrhga ggepqaspav ppvespqspg gpaensrhrl
      181 tplegrqasr gslweetqas prpsapvftg cfhaypsevl kpvsqhprdl fpslkdrvll
      241 gppakeeglp akepplvwgg dasrpsafhk gssrkgslyp kpkacwvspm tkvpaespvp
      301 lptfpsspgl ghkrslaeeg svhggkklra vspflkeana qecgtkpggp dlavscllgp
      361 alpeayrgtm lrcplnftgt lgplkgqatl pfsplvipaf pahllaatap spmttglmhl
      421 ppasfdgalc hrlcpasspw hmppatayta phfsfhlntk l
//
LOCUS       XP_061011996             303 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase NEURL3 isoform X1 [Dama dama].
ACCESSION   XP_061011996
VERSION     XP_061011996.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156013.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..303
                     /product="E3 ubiquitin-protein ligase NEURL3 isoform X1"
                     /calculated_mol_wt=33151
     Region          59..211
                     /region_name="Neuralized"
                     /note="pfam07177"
                     /db_xref="CDD:462112"
     Region          238..287
                     /region_name="RING-HC_NEURL3"
                     /note="RING finger, HC subclass, found in neuralized-like
                     protein 3 (NEURL3) and similar proteins; cd16552"
                     /db_xref="CDD:438214"
     CDS             1..303
                     /gene="NEURL3"
                     /coded_by="XM_061156013.1:3161..4072"
                     /db_xref="GeneID:133065202"
ORIGIN      
        1 mgesrdsspr ehglmemppf pwwgglqaar kasrcvrptf sdapapaada eaprealrfh
       61 aqavgaqvrl daqrstafrh atfhdgivfs qrpvqpgerv alrllwhepg wlgglrvgft
      121 rldparvsap slppfvcpdl eqqsqtwaam lpdgcalpgd vvrfwvnrqg rifarvnsgp
      181 rrllregvlm gaplwavmdv ygttkaiqll dltandfptt mprdlsdeal pgpkasagee
      241 caicfhqvan tclvpcghth fcsscawrvf rdtarcpvcr weieevalaw dplvlgageg
      301 llv
//
LOCUS       XP_061011997             271 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase NEURL3 isoform X2 [Dama dama].
ACCESSION   XP_061011997
VERSION     XP_061011997.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156014.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..271
                     /product="E3 ubiquitin-protein ligase NEURL3 isoform X2"
                     /calculated_mol_wt=29714
     Region          27..179
                     /region_name="Neuralized"
                     /note="pfam07177"
                     /db_xref="CDD:462112"
     Region          206..255
                     /region_name="RING-HC_NEURL3"
                     /note="RING finger, HC subclass, found in neuralized-like
                     protein 3 (NEURL3) and similar proteins; cd16552"
                     /db_xref="CDD:438214"
     CDS             1..271
                     /gene="NEURL3"
                     /coded_by="XM_061156014.1:256..1071"
                     /db_xref="GeneID:133065202"
ORIGIN      
        1 mpeeprrmga qicsqadaea prealrfhaq avgaqvrlda qrstafrhat fhdgivfsqr
       61 pvqpgerval rllwhepgwl gglrvgftrl dparvsapsl ppfvcpdleq qsqtwaamlp
      121 dgcalpgdvv rfwvnrqgri farvnsgprr llregvlmga plwavmdvyg ttkaiqlldl
      181 tandfpttmp rdlsdealpg pkasageeca icfhqvantc lvpcghthfc sscawrvfrd
      241 tarcpvcrwe ieevalawdp lvlgagegll v
//
LOCUS       XP_061011998             235 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase NEURL3 isoform X3 [Dama dama].
ACCESSION   XP_061011998
VERSION     XP_061011998.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156015.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..235
                     /product="E3 ubiquitin-protein ligase NEURL3 isoform X3"
                     /calculated_mol_wt=25720
     Region          59..211
                     /region_name="Neuralized"
                     /note="pfam07177"
                     /db_xref="CDD:462112"
     CDS             1..235
                     /gene="NEURL3"
                     /coded_by="XM_061156015.1:3186..3893"
                     /db_xref="GeneID:133065202"
ORIGIN      
        1 mgesrdsspr ehglmemppf pwwgglqaar kasrcvrptf sdapapaada eaprealrfh
       61 aqavgaqvrl daqrstafrh atfhdgivfs qrpvqpgerv alrllwhepg wlgglrvgft
      121 rldparvsap slppfvcpdl eqqsqtwaam lpdgcalpgd vvrfwvnrqg rifarvnsgp
      181 rrllregvlm gaplwavmdv ygttkaiqll dltandfptt mprdlsdeal pgpkg
//
LOCUS       XP_061011999             738 aa            linear   MAM 02-DEC-2023
DEFINITION  condensin complex subunit 2 isoform X1 [Dama dama].
ACCESSION   XP_061011999
VERSION     XP_061011999.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156016.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..738
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..738
                     /product="condensin complex subunit 2 isoform X1"
                     /calculated_mol_wt=81729
     Region          52..736
                     /region_name="Cnd2"
                     /note="Condensin complex subunit 2; pfam05786"
                     /db_xref="CDD:428627"
     CDS             1..738
                     /gene="NCAPH"
                     /coded_by="XM_061156016.1:419..2635"
                     /db_xref="GeneID:133065204"
ORIGIN      
        1 mrppfpatmk nspsgprgrh hstaspaera fptalprkap lntpgtpvle dfpqnddeke
       61 klqrrrsrvf dlqfstdspr llasphllas psgrnvdvsa tmpkftntqi tehystcikl
      121 stenkittkn afglhlidfm seilkqkdae ptnfkvaagt ldastkiyav rvdavhadvy
      181 kvlgglgkda pppeeaedhg adgsatetgt akkapkprkk hscktieqnv nnlnvsnadr
      241 kyevdpmfqk taasfdecst agvflstlhc pdyrsellfp tdiqtlssge ppelpdlgwv
      301 emtdlkaalq qcaedrqicp slagfqftkw dseahnesvs alvdkfkksd qvfdlnaeve
      361 dsdcedfpng pleddfdand eaeqtaagdr telgswkepc qvqscqdevi plgdgdiwtl
      421 cpllsmkpge ysyfsprtms mwagpdhwrf rprhkcdtas qsehrkkssk dfkidfdddi
      481 dfdvhfrktk avtvltkftl enqswrattl ptdfqyetkd lvqlhlkpgt rllkvaqgqk
      541 agtehdeeig dydynnpndt snfcpglqaa dsdyeesddl fvgpagtldh sdhpsattqg
      601 ngeasevhgp dittygesnl vaepqkvnki eiqyaktakk mdmkklkqsm wsllteipkq
      661 adaevnhsen geagpfeega dkklssltkd lqkslpplma qnlsiplafa cllhlanekn
      721 lklegtkdls dvlvrqed
//
LOCUS       XP_061012000             730 aa            linear   MAM 02-DEC-2023
DEFINITION  condensin complex subunit 2 isoform X2 [Dama dama].
ACCESSION   XP_061012000
VERSION     XP_061012000.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156017.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..730
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..730
                     /product="condensin complex subunit 2 isoform X2"
                     /calculated_mol_wt=80831
     Region          44..728
                     /region_name="Cnd2"
                     /note="Condensin complex subunit 2; pfam05786"
                     /db_xref="CDD:428627"
     CDS             1..730
                     /gene="NCAPH"
                     /coded_by="XM_061156017.1:763..2955"
                     /db_xref="GeneID:133065204"
ORIGIN      
        1 mknspsgprg rhhstaspae rafptalprk aplntpgtpv ledfpqndde keklqrrrsr
       61 vfdlqfstds prllasphll aspsgrnvdv satmpkftnt qitehystci klstenkitt
      121 knafglhlid fmseilkqkd aeptnfkvaa gtldastkiy avrvdavhad vykvlgglgk
      181 dapppeeaed hgadgsatet gtakkapkpr kkhscktieq nvnnlnvsna drkyevdpmf
      241 qktaasfdec stagvflstl hcpdyrsell fptdiqtlss geppelpdlg wvemtdlkaa
      301 lqqcaedrqi cpslagfqft kwdseahnes vsalvdkfkk sdqvfdlnae vedsdcedfp
      361 ngpleddfda ndeaeqtaag drtelgswke pcqvqscqde viplgdgdiw tlcpllsmkp
      421 geysyfsprt msmwagpdhw rfrprhkcdt asqsehrkks skdfkidfdd didfdvhfrk
      481 tkavtvltkf tlenqswrat tlptdfqyet kdlvqlhlkp gtrllkvaqg qkagtehdee
      541 igdydynnpn dtsnfcpglq aadsdyeesd dlfvgpagtl dhsdhpsatt qgngeasevh
      601 gpdittyges nlvaepqkvn kieiqyakta kkmdmkklkq smwsllteip kqadaevnhs
      661 engeagpfee gadkklsslt kdlqkslppl maqnlsipla facllhlane knlklegtkd
      721 lsdvlvrqed
//
LOCUS       XP_061012001             547 aa            linear   MAM 02-DEC-2023
DEFINITION  inositol 1,4,5-trisphosphate receptor-interacting protein-like 1
            [Dama dama].
ACCESSION   XP_061012001
VERSION     XP_061012001.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156018.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..547
                     /product="inositol 1,4,5-trisphosphate
                     receptor-interacting protein-like 1"
                     /calculated_mol_wt=62370
     Region          410..514
                     /region_name="Mab-21_C"
                     /note="Mab-21 protein HhH/H2TH-like domain; pfam20266"
                     /db_xref="CDD:466416"
     CDS             1..547
                     /gene="ITPRIPL1"
                     /coded_by="XM_061156018.1:347..1990"
                     /db_xref="GeneID:133065205"
ORIGIN      
        1 mavisllfla vmyvvhhpll vsdrmdldtl arsrqlekrm seemrqlele feerkraaee
       61 kqkaenfwrg dtsgdqlvlg kkdrgwpfqv dgqegplgwm lgnlwnaglf ciflifellr
      121 qnmqhepafd sssddeeeev rvvpvtsynw ltdfpsreal esfhkhhvqn vtrdlpctce
      181 fvesfvddli kacrvlsrre ahpqledclg igaafekwgt lhetqkfdil vpivppqgtm
      241 fvlemrdpal grrcgcvlve secvckrekl lgdvlclvhh hrdhsalvgk snssvkaalc
      301 tgshldvykt vqwfrnmvgn awalvahkyd fklslppstt ccklrldyrs grflsirlvl
      361 gvqredtlvy lvsqapgqeq ltsvdwpesf aacehlflkl vgrfapentc hlkclqiils
      421 lrdlqslpqg asrpiltsyh fktalmhlll rlpltdwqhs mlsqrlqdil wflgrglqqr
      481 slhhflignt flpltipipk tfrnaepvnl fqhlvlnpma hsqaveefhn lltqvkalpc
      541 sslagah
//
LOCUS       XP_061012002             547 aa            linear   MAM 02-DEC-2023
DEFINITION  inositol 1,4,5-trisphosphate receptor-interacting protein-like 1
            [Dama dama].
ACCESSION   XP_061012002
VERSION     XP_061012002.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156019.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..547
                     /product="inositol 1,4,5-trisphosphate
                     receptor-interacting protein-like 1"
                     /calculated_mol_wt=62370
     Region          410..514
                     /region_name="Mab-21_C"
                     /note="Mab-21 protein HhH/H2TH-like domain; pfam20266"
                     /db_xref="CDD:466416"
     CDS             1..547
                     /gene="ITPRIPL1"
                     /coded_by="XM_061156019.1:245..1888"
                     /db_xref="GeneID:133065205"
ORIGIN      
        1 mavisllfla vmyvvhhpll vsdrmdldtl arsrqlekrm seemrqlele feerkraaee
       61 kqkaenfwrg dtsgdqlvlg kkdrgwpfqv dgqegplgwm lgnlwnaglf ciflifellr
      121 qnmqhepafd sssddeeeev rvvpvtsynw ltdfpsreal esfhkhhvqn vtrdlpctce
      181 fvesfvddli kacrvlsrre ahpqledclg igaafekwgt lhetqkfdil vpivppqgtm
      241 fvlemrdpal grrcgcvlve secvckrekl lgdvlclvhh hrdhsalvgk snssvkaalc
      301 tgshldvykt vqwfrnmvgn awalvahkyd fklslppstt ccklrldyrs grflsirlvl
      361 gvqredtlvy lvsqapgqeq ltsvdwpesf aacehlflkl vgrfapentc hlkclqiils
      421 lrdlqslpqg asrpiltsyh fktalmhlll rlpltdwqhs mlsqrlqdil wflgrglqqr
      481 slhhflignt flpltipipk tfrnaepvnl fqhlvlnpma hsqaveefhn lltqvkalpc
      541 sslagah
//
LOCUS       XP_061012003            2136 aa            linear   MAM 02-DEC-2023
DEFINITION  U5 small nuclear ribonucleoprotein 200 kDa helicase [Dama dama].
ACCESSION   XP_061012003
VERSION     XP_061012003.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156020.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2136
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2136
                     /product="U5 small nuclear ribonucleoprotein 200 kDa
                     helicase"
                     /calculated_mol_wt=244289
     Region          254..363
                     /region_name="Helicase_PWI"
                     /note="N-terminal helicase PWI domain; pfam18149"
                     /db_xref="CDD:436309"
     Region          462..1017
                     /region_name="BRR2"
                     /note="Replicative superfamily II helicase [Replication,
                     recombination and repair]; COG1204"
                     /db_xref="CDD:440817"
     Region          464..677
                     /region_name="DEXHc_Brr2_1"
                     /note="N-terminal DEXH-box helicase domain of spliceosomal
                     Brr2 RNA helicase; cd18019"
                     /db_xref="CDD:350777"
     Site            order(480,482,485,506..510,615..616)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350777"
     Site            order(544..546,572..576,578..579,589,591..592,595,599,624)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:350777"
     Region          982..1285
                     /region_name="Sec63"
                     /note="Sec63 Brl domain; pfam02889"
                     /db_xref="CDD:460740"
     Region          1309..1849
                     /region_name="BRR2"
                     /note="Replicative superfamily II helicase [Replication,
                     recombination and repair]; COG1204"
                     /db_xref="CDD:440817"
     Region          1325..1515
                     /region_name="DEXHc_Brr2_2"
                     /note="C-terminal D[D/E]X[H/Q]-box helicase domain of
                     spliceosomal Brr2 RNA helicase; cd18021"
                     /db_xref="CDD:350779"
     Site            order(1325,1327..1329,1332,1351..1357)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350779"
     Region          1809..2125
                     /region_name="SEC63"
                     /note="Domain of unknown function in Sec63p, Brr2p and
                     other proteins; smart00611"
                     /db_xref="CDD:214744"
     CDS             1..2136
                     /gene="SNRNP200"
                     /coded_by="XM_061156020.1:140..6550"
                     /db_xref="GeneID:133065206"
ORIGIN      
        1 madvtarslq yeykansnlv lqadrslidr trrdeptgev lslvgklegt rmgdkaqrtk
       61 pqmqeerrak rrkrdedrhd inkmkgytll segidemvgi iykpktketr etyevllsfi
      121 qaalgdqprd ilcgaadevl avlkneklrd kerrkeidll lgqtddtryh vlvnlgkkit
      181 dyggdkeiqn mddnidetyg vnvqfesdee egdedvygev reeasdddme gdeavvrctl
      241 sanlvasgel msskkkdlhp rdidafwlqr qlsrfyddai vsqkkadevl eilktasddr
      301 ecenqlvlll gfntfdfikv lrqhrmmily ctllasaqse aekerimgkm eadpelskfl
      361 yqlheteked lireersrre rvrqsrmdtd letmdldqgg ealaprqvld ledlvftqgs
      421 hfmankrcql pdgsfrrqrk gyeevhvpal kpkpfgseeq llpveklpky aqagfegfkt
      481 lnriqsklyr aaletdenll lcaptgagkt nvalmcmlre igkhinmdgt invddfkiiy
      541 iapmrslvqe mvgsfgkrla tygitvaelt gdhqlckeei satqiivctp ekwdiitrkg
      601 gertytqlvr liildeihll hddrgpvlea lvarairnie mtqedvrlig lsatlpnyed
      661 vatflrvdpa kglfyfdnsf rpvpleqtyv gitekkaikr fqimneivye kimehagknq
      721 vlvfvhsrke tgktaraird mclekdtlgl flregsaste vlrteaeqck nlelkdllpy
      781 gfaihhagmt rvdrtlvedl fadkhiqvlv statlawgvn lpahtviikg tqvyspekgr
      841 wtelgaldil qmlgragrpq ydtkgegili tshgelqyyl sllnqqlpie sqmvsklpdm
      901 lnaeivlgnv qnakdavnwl gyaylyirml rsptlygish ddlkgdplld qrrldlvhta
      961 almldknnlv kydkktgnfq vtelgriash yyitndtvqt ynqllkptls eielfrvfsl
     1021 ssefknitvr eeeklelqkl lervpipvke sieepsakin vllqafisql klegfalmad
     1081 mvyvtqsagr lmraifeivl nrgwaqltdk tlnlckmidk rmwqsmcplr qfrklpeevv
     1141 kkiekknfpf erlydlnhne igelirmpkm gktihkyvhl fpklelsvhl qpitrstlkv
     1201 eltitpdfqw dekvhgssea fwilvedvds evilhheyfl lkakyaqdeh litffvpvfe
     1261 plppqyfirv vsdrwlscet qlpvsfrhli lpekypppte lldlqplpvs alrnsafesl
     1321 yqdkfpffnp iqtqvfntvy nsddnvfvga ptgsgktica efailrmllq nsegrcvyit
     1381 pmealaeqvy mdwyekfqdr lskkvvlltg etstdlkllg kgniiistpe kwdilsrrwk
     1441 qrknvqninl fvvdevhlig gengpvlevi csrmryissq ierpirival ssslsnakdv
     1501 ahwlgcsats tfnfhpnvrp vplelhiqgf nishtqtrll smakpvyhai tkhspkkpvi
     1561 vfvpsrkqtr ltaidilttc aadiqrqrfl hctekdlipy leklsdstlk etllngvgyl
     1621 heglsplerr lveqlfssga iqvvvasrsl cwgmsvaahl viimdtqyyn gkihayvdyp
     1681 iydvlqmvgh anrplqddeg rcvimcqgsk kdffkkflye plpveshldh cmhdhfnaei
     1741 vtktienkqd avdyltwtfl yrrmtqnpny ynlqgishrh lsdhlselve qtlsdleqsk
     1801 cisvedemdv aplnlgmiaa yyyinyttie lfsmslnakt kvrglieiis naaeyenipi
     1861 rhhednllrq laqkvphkln npkfndphvk tnlllqahls rmqlsaelqs dteeilskai
     1921 rliqacvdvl ssngwlspal aamelaqmvt qamwskdsyl kqlphftseh ikrctdkgve
     1981 svfdimemed eernallqls dsqiadvarf cnrypniels yevvdkdair sggpvvvlvq
     2041 lereeevtgp viaplfpqkr eegwwvvigd aksnslisik rltlqqkakv kldfvapatg
     2101 ahnytlyfms daymgcdqey kfsvdvkeae tdsdsd
//
LOCUS       XP_061012004             339 aa            linear   MAM 02-DEC-2023
DEFINITION  probable cytosolic iron-sulfur protein assembly protein CIAO1 [Dama
            dama].
ACCESSION   XP_061012004
VERSION     XP_061012004.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156021.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..339
                     /product="probable cytosolic iron-sulfur protein assembly
                     protein CIAO1"
                     /calculated_mol_wt=37611
     Region          7..332
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(14,33,37,43..44,59..60,78,82,88,91,103..104,121,126,
                     132..133,149,166,171,177..178,192..193,211,215,221..222,
                     249,251,269,274,279..280,301..302,321,325,331..332)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          19..58
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          65..103
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          108..147
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          154..191
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          197..248
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          255..295
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          306..331
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..339
                     /gene="CIAO1"
                     /coded_by="XM_061156021.1:144..1163"
                     /db_xref="GeneID:133065207"
ORIGIN      
        1 mkdslvllsr ilahpdsrcw flawnpagtl lascggdrsv riwgregdsw ncksvlcegh
       61 qrtvrkvaws pcgnylasas fdattciwkk neddfecvtt leghenevks vawapsgnll
      121 atcsrdksvw vwevdeedey ecvsvlnsht qdvkhvvwhp sqellasasy ddtvklyree
      181 eddwvccatl eghestvwsl afdpsgqrla scsddrtvrv wrqylpgneq gvacsgseas
      241 wkcvctlsgf hsrtiydvaw cqligalata cgddairvfe edpgsdpqqp tfsltahvpq
      301 ahsqdvncva wnpkerglla scsddgelaf wkyqpsegi
//
LOCUS       XP_061012005             238 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 127 [Dama dama].
ACCESSION   XP_061012005
VERSION     XP_061012005.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156022.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..238
                     /product="transmembrane protein 127"
                     /calculated_mol_wt=25738
     Region          84..196
                     /region_name="TMEM127"
                     /note="Transmembrane protein 127; pfam20517"
                     /db_xref="CDD:466666"
     CDS             1..238
                     /gene="TMEM127"
                     /coded_by="XM_061156022.1:227..943"
                     /db_xref="GeneID:133065208"
ORIGIN      
        1 myapggaglp ggrrrrnpgg salpkqpers lasalpgals italctalae pawlhihggt
       61 csrqelgvsd vlgyvhpdll kdfcmnpqtv lllrviaafc flgilcslsa flldvfgpkh
      121 palkitrrya fahiltvlqc atvigfsywa selilaqqqq hkkyhgsqvy vtfavsfylv
      181 agaggasila taanllrhyp teeeeqalel lsemeenepy paeyevinqf qpppaytp
//
LOCUS       XP_061012006             381 aa            linear   MAM 02-DEC-2023
DEFINITION  stAR-related lipid transfer protein 7, mitochondrial isoform X1
            [Dama dama].
ACCESSION   XP_061012006
VERSION     XP_061012006.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156023.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..381
                     /product="stAR-related lipid transfer protein 7,
                     mitochondrial isoform X1"
                     /calculated_mol_wt=43623
     Region          128..336
                     /region_name="START_STARD7-like"
                     /note="Lipid-binding START domain of mammalian STARD7 and
                     related proteins; cd08911"
                     /db_xref="CDD:176920"
     Site            order(155..156,163,176,178,190,194,200,206,226,228,230,
                     239,241,278,280,282,297,299,301,316..318,322,325..326,329)
                     /site_type="active"
                     /note="putative PtdCho binding site [active]"
                     /db_xref="CDD:176920"
     CDS             1..381
                     /gene="STARD7"
                     /coded_by="XM_061156023.1:30..1175"
                     /db_xref="GeneID:133065210"
ORIGIN      
        1 mfprrplagl aawlvgaaaa gragargggl lallanqcrf vtglrvrraq qiaqlygrly
       61 sessrrvllg rlwrrlrgrp ghasalmaal agvfvwdeer ireeelqrsi demkrleems
      121 gmfqssgier hppepksqte giedsggkeq pwemvmdkkh fklwrrpisg thlyqyrvfg
      181 tytdvtprqf fnvqldteyr kkwdalvikl evierdvvsg sevlhwvthf pypmysrdyv
      241 yvrrysvdee nnvmvlvsra vehpsvpesp efvrvrsyes qmvirphksf dengfdyllt
      301 ysdnpqtvfp rycvswmvss gmpdfleklh matlkaknme ikvkdyissk plevgteaka
      361 atpsserkse gscgpariey a
//
LOCUS       XP_061012007             269 aa            linear   MAM 02-DEC-2023
DEFINITION  stAR-related lipid transfer protein 7, mitochondrial isoform X2
            [Dama dama].
ACCESSION   XP_061012007
VERSION     XP_061012007.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156024.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..269
                     /product="stAR-related lipid transfer protein 7,
                     mitochondrial isoform X2"
                     /calculated_mol_wt=31231
     Region          16..224
                     /region_name="START_STARD7-like"
                     /note="Lipid-binding START domain of mammalian STARD7 and
                     related proteins; cd08911"
                     /db_xref="CDD:176920"
     Site            order(43..44,51,64,66,78,82,88,94,114,116,118,127,129,166,
                     168,170,185,187,189,204..206,210,213..214,217)
                     /site_type="active"
                     /note="putative PtdCho binding site [active]"
                     /db_xref="CDD:176920"
     CDS             1..269
                     /gene="STARD7"
                     /coded_by="XM_061156024.1:392..1201"
                     /db_xref="GeneID:133065210"
ORIGIN      
        1 mkrleemsgm fqssgierhp pepksqtegi edsggkeqpw emvmdkkhfk lwrrpisgth
       61 lyqyrvfgty tdvtprqffn vqldteyrkk wdalviklev ierdvvsgse vlhwvthfpy
      121 pmysrdyvyv rrysvdeenn vmvlvsrave hpsvpespef vrvrsyesqm virphksfde
      181 ngfdylltys dnpqtvfpry cvswmvssgm pdfleklhma tlkaknmeik vkdyisskpl
      241 evgteakaat psserksegs cgparieya
//
LOCUS       XP_061012008             314 aa            linear   MAM 02-DEC-2023
DEFINITION  dual specificity protein phosphatase 2 [Dama dama].
ACCESSION   XP_061012008
VERSION     XP_061012008.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156025.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..314
                     /product="dual specificity protein phosphatase 2"
                     /calculated_mol_wt=33984
     Region          8..143
                     /region_name="DSP_MapKP"
                     /note="N-terminal regulatory rhodanese domain of dual
                     specificity phosphatases (DSP), such as Mapk Phosphatase.
                     This domain is believed to determine substrate specificity
                     by binding the substrate, such as ERK2, and activating the
                     C-terminal catalytic domain by...; cd01446"
                     /db_xref="CDD:238723"
     Site            56..58
                     /site_type="active"
                     /note="putative substrate binding residues [active]"
                     /db_xref="CDD:238723"
     Region          170..313
                     /region_name="DSP_DUSP2"
                     /note="dual specificity phosphatase domain of dual
                     specificity protein phosphatase 2; cd14641"
                     /db_xref="CDD:350489"
     CDS             1..314
                     /gene="DUSP2"
                     /coded_by="XM_061156025.1:108..1052"
                     /db_xref="GeneID:133065212"
ORIGIN      
        1 mgleaareld caalgallre preaertlvl dcrpflafcr rhvraarpvp wnallrrrar
       61 gppaaalacl lpdralrarl argelaravv ldegsasvad lppdgpahal laallhetra
      121 gpaavcflpg gfdrfqaccp dlcsespvpa mtpdnndnnr sdsrapsydq ggpveilpyl
      181 ylgscshssd lqglracgit avlnvsascp nhfegllryk sipvednqmv eisawfpeai
      241 gfidsvknsg grvlvhcqag isrsaticla yliqsrrvrl deafdfvkqr rgvispnfsf
      301 mgqllqfetq vlch
//
LOCUS       XP_061012009             447 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-2B adrenergic receptor [Dama dama].
ACCESSION   XP_061012009
VERSION     XP_061012009.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156026.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..447
                     /product="alpha-2B adrenergic receptor"
                     /calculated_mol_wt=49489
     Region          7..434
                     /region_name="7tmA_alpha2B_AR"
                     /note="alpha-2 adrenergic receptors subtype B, member of
                     the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15321"
                     /db_xref="CDD:320444"
     Region          14..40
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320444"
     Region          47..73
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320444"
     Region          85..115
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320444"
     Site            order(88,92..93,96..97,166,173,176..177,180,381,384..385,
                     388,405,409,413)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:320444"
     Region          127..150
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320444"
     Region          169..198
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320444"
     Region          <206..>286
                     /region_name="PHA03169"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:223003"
     Region          361..391
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320444"
     Region          402..427
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320444"
     CDS             1..447
                     /gene="ADRA2B"
                     /coded_by="XM_061156026.1:478..1821"
                     /db_xref="GeneID:133065213"
ORIGIN      
        1 mdhqepysvq ataaiaavit flilftifgn alvilavlts rslrapqnlf lvslaaadil
       61 vatliipfsl anellgywyf wrtwcevyla ldvlfctssi vhlcaisldr ywavsraley
      121 nskrtprrik fiilivwlia aaislppliy kgdqgpqpla rpqcklnqea wyilassvgs
      181 ffapclimil vylriymiak rshcrsprak ggpgeraskq phpvpgevsd sarlptlasq
      241 latpgeangc sqprpgekge getpedpgtp alppswpvip nsgqgqkegv cgsspeevae
      301 eeeeegcepq alpaspasac spplqqpqgs rvlatlrgqv llgrgtgpag aqwwrrrtql
      361 srekrftfvl avvigvfvlc wfpfffsysl gaicpqhckv phglfqfffw igycnsslnp
      421 viytifnqdf rrafrrilcr qwtqmaw
//
LOCUS       XP_061012010             723 aa            linear   MAM 02-DEC-2023
DEFINITION  glycerol-3-phosphate acyltransferase 2, mitochondrial [Dama dama].
ACCESSION   XP_061012010
VERSION     XP_061012010.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156027.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..723
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..723
                     /product="glycerol-3-phosphate acyltransferase 2,
                     mitochondrial"
                     /calculated_mol_wt=80551
     Region          176..315
                     /region_name="LPLAT"
                     /note="Lysophospholipid acyltransferases (LPLATs) of
                     glycerophospholipid biosynthesis; cl17185"
                     /db_xref="CDD:473073"
     CDS             1..723
                     /gene="GPAT2"
                     /coded_by="XM_061156027.1:1..2172"
                     /db_xref="GeneID:133065214"
ORIGIN      
        1 mntmaearlq tqqrssqdgr etslwssgfg mkleavtpfl gkyrpfvgrc cqtctpkswe
       61 slfhrsimdl gfcnvilvke dntrfrgwlv rrlcyflwsl eqhippcqda sqkimestgv
      121 rnvisgrapg gagegpvpsh vkkevqrila hiqapprpfl lrlfswallr flnclflnvq
      181 lyrgqmkmvh kaaqagsplv flsthksvld gillpfvlls qgvgvlrvaw dprtcspilr
      241 allkklggff lppeanlsld spegvlarav vhaalaplgl wtgllavlrs lrrwgcsrrv
      301 cvrvhlaqpf slqeytinar scwgsrqtle qllqpivlgh ctvvpdteke qewtpmtgpl
      361 lalrqedqll vrrlswhvln asvassavms taimatlllf khqkllgefs wlteetllrg
      421 fdvgfsgqlr cllrhtlsll rphvallriq qgdllvvprp gpgltslarl saellptfls
      481 eavgacavrg llagrvppeg pwelqgiell sqkelycqil lllhllpqdl lllqpcqssy
      541 cycqevldrl iqcgllvaee tpgsqpacdt grqrlsakll wklsgdftds dsddfeeaeg
      601 ryfrlsqqsr cpdfflflcr llspvlkafa qaaaflhrgq lpdteagyae qlfqflqata
      661 qeeglfecad pnlaisaiwt frdlgvlqqm pgptgpvlhl sqafasqesq eklgqfirqf
      721 ics
//
LOCUS       XP_061012011             314 aa            linear   MAM 02-DEC-2023
DEFINITION  fumarylacetoacetate hydrolase domain-containing protein 2 [Dama
            dama].
ACCESSION   XP_061012011
VERSION     XP_061012011.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156028.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..314
                     /product="fumarylacetoacetate hydrolase domain-containing
                     protein 2"
                     /calculated_mol_wt=34471
     Region          100..314
                     /region_name="YcgM"
                     /note="2-keto-4-pentenoate
                     hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase
                     (catechol pathway) [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG0179"
                     /db_xref="CDD:439949"
     CDS             1..314
                     /gene="LOC133065215"
                     /coded_by="XM_061156028.1:154..1098"
                     /db_xref="GeneID:133065215"
ORIGIN      
        1 mlgsggrrll ttvlqvqrwp fqpsrdmrlv qfqaphltgp hlglesgngg gvinlnafep
       61 tlprtmvefl eqgeatlsvv rralathlpv lpwtevtlla pvtrpdkvvc vgmnyadhcr
      121 eqnvpvpkep iifskfasai vgpyddiilp pesqevdwev elavvigkrg khikaadama
      181 hvagftvahd vsardwqvrr ngkqwllgkt fdtfcplgpa lvtkdsvadp hnlkiccrvn
      241 gevmqssntn qmvfkteeli awvsqfvtly pgdiiltgtp pgvgmfrkpp vflkkgdevq
      301 ceiedlgviv nkvv
//
LOCUS       XP_061012012             522 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 892 [Dama dama].
ACCESSION   XP_061012012
VERSION     XP_061012012.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156029.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..522
                     /product="zinc finger protein 892"
                     /calculated_mol_wt=58897
     Region          218..>476
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          223..243
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          251..271
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(256,258,260,262..263,266..267,270,284,286,290..291,
                     294..295,298,312,314,316,318..319,322..323,326)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          279..299
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(279,282,295,299)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          307..327
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          335..355
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(335,338,351,355)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          363..383
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          391..411
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(396,398,400,402..403,406..407,410,424,426,430..431,
                     434..435,438,452,454,456,458..459,462..463,466)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          419..439
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(419,422,435,439)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          447..467
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          501..519
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..522
                     /gene="ZNF892"
                     /coded_by="XM_061156029.1:634..2202"
                     /db_xref="GeneID:133065217"
ORIGIN      
        1 mepkrrgsls edsdlpqagn pkenglttvl ltpasqgsmi rdmaeavtqw kqlnppqggk
       61 pekprnlvll glpiskpdvi sqlesgetle rkvskapnpd wgtepeskev apeqdiseee
      121 stpgvlverf pkessseced slknqqenhe khliqeagpq tkpsgersyq cdefgrnfsr
      181 rsllvqqqge srhsrdsfkk nlkqssdlmk hekicagkkp wkcnecekaf syysafvlhq
      241 rihtgekpye cnecgkafsq sihltlhqri htgekpyrch ecgkafshrs alirhhiiht
      301 gekpyecnec gkafnqssyl tqhqrihtge kpyecnecgk afsqstfltq hqvihtgekp
      361 ykcnecgkaf sdrsgliqhq rthtgerpye cnecgkafgy csaltqhqrt htgekpykcn
      421 dcakafsdrs alirhqrtht gekpykckdc gkafsqsssl tkhqkthtge kpykckecgk
      481 afsqssslsq hqkthsggki reygkafseh safnqqkrid tg
//
LOCUS       XP_061012013             425 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 2 [Dama dama].
ACCESSION   XP_061012013
VERSION     XP_061012013.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156030.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..425
                     /product="zinc finger protein 2"
                     /calculated_mol_wt=48077
     Region          13..72
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          174..195
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          175..195
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <186..412
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          203..223
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          231..251
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(236,238,240,242..243,246..247,250,264,266,270..271,
                     274..275,278,292,294,296,298..299,302..303,306)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          259..279
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(259,262,275,279)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          287..307
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          315..335
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          343..363
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(348,350,352,354..355,358..359,362,376,378,382..383,
                     386..387,390,404,406,408,410..411,414..415)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          371..391
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(371,374,387,391)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          399..417
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..425
                     /gene="ZNF2"
                     /coded_by="XM_061156030.1:96..1373"
                     /db_xref="GeneID:133065218"
ORIGIN      
        1 maavsltrcq dpvtfedvai vftdeewrhl vptqrdlyke vmlenyksiv slglpipgpd
       61 vifqlkrgde pwlvefhgfe gkegaenvsl dwetkpeiqg aseeeksegs lkeklgrkgs
      121 pspkfevyal dgrlgtekes ptveackkpp sleeslrhra tppkkiltke rdqecsncgk
      181 affdhsslir hqrthtgekp ydcpecgkaf shrsslsrhl mshtgespye cnacgkaffd
      241 rssltvhqri htgekpfkcs ecgkaffdrs sltrhqriht gespyecnqc gkafsqksil
      301 trhqlihtgr kpyecnecgk afygvsslnr hqkahagepr yqcsecgkaf fdrssltqhq
      361 kihtgdkpye csecgkafsq rcrltrhqrv htgekpfecs vcgkvfssks sviqhqrrya
      421 kqgid
//
LOCUS       XP_061012014             425 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 2 [Dama dama].
ACCESSION   XP_061012014
VERSION     XP_061012014.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156031.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..425
                     /product="zinc finger protein 2"
                     /calculated_mol_wt=48077
     Region          13..72
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          174..195
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          175..195
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <186..412
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          203..223
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          231..251
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(236,238,240,242..243,246..247,250,264,266,270..271,
                     274..275,278,292,294,296,298..299,302..303,306)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          259..279
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(259,262,275,279)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          287..307
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          315..335
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          343..363
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(348,350,352,354..355,358..359,362,376,378,382..383,
                     386..387,390,404,406,408,410..411,414..415)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          371..391
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(371,374,387,391)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          399..417
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..425
                     /gene="ZNF2"
                     /coded_by="XM_061156031.1:258..1535"
                     /db_xref="GeneID:133065218"
ORIGIN      
        1 maavsltrcq dpvtfedvai vftdeewrhl vptqrdlyke vmlenyksiv slglpipgpd
       61 vifqlkrgde pwlvefhgfe gkegaenvsl dwetkpeiqg aseeeksegs lkeklgrkgs
      121 pspkfevyal dgrlgtekes ptveackkpp sleeslrhra tppkkiltke rdqecsncgk
      181 affdhsslir hqrthtgekp ydcpecgkaf shrsslsrhl mshtgespye cnacgkaffd
      241 rssltvhqri htgekpfkcs ecgkaffdrs sltrhqriht gespyecnqc gkafsqksil
      301 trhqlihtgr kpyecnecgk afygvsslnr hqkahagepr yqcsecgkaf fdrssltqhq
      361 kihtgdkpye csecgkafsq rcrltrhqrv htgekpfecs vcgkvfssks sviqhqrrya
      421 kqgid
//
LOCUS       XP_061012015             425 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 2 [Dama dama].
ACCESSION   XP_061012015
VERSION     XP_061012015.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156032.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..425
                     /product="zinc finger protein 2"
                     /calculated_mol_wt=48077
     Region          13..72
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          174..195
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          175..195
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <186..412
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          203..223
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          231..251
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(236,238,240,242..243,246..247,250,264,266,270..271,
                     274..275,278,292,294,296,298..299,302..303,306)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          259..279
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(259,262,275,279)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          287..307
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          315..335
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          343..363
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(348,350,352,354..355,358..359,362,376,378,382..383,
                     386..387,390,404,406,408,410..411,414..415)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          371..391
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(371,374,387,391)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          399..417
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..425
                     /gene="ZNF2"
                     /coded_by="XM_061156032.1:100..1377"
                     /db_xref="GeneID:133065218"
ORIGIN      
        1 maavsltrcq dpvtfedvai vftdeewrhl vptqrdlyke vmlenyksiv slglpipgpd
       61 vifqlkrgde pwlvefhgfe gkegaenvsl dwetkpeiqg aseeeksegs lkeklgrkgs
      121 pspkfevyal dgrlgtekes ptveackkpp sleeslrhra tppkkiltke rdqecsncgk
      181 affdhsslir hqrthtgekp ydcpecgkaf shrsslsrhl mshtgespye cnacgkaffd
      241 rssltvhqri htgekpfkcs ecgkaffdrs sltrhqriht gespyecnqc gkafsqksil
      301 trhqlihtgr kpyecnecgk afygvsslnr hqkahagepr yqcsecgkaf fdrssltqhq
      361 kihtgdkpye csecgkafsq rcrltrhqrv htgekpfecs vcgkvfssks sviqhqrrya
      421 kqgid
//
LOCUS       XP_061012016             430 aa            linear   MAM 02-DEC-2023
DEFINITION  small ribosomal subunit protein uS5m [Dama dama].
ACCESSION   XP_061012016
VERSION     XP_061012016.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156033.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..430
                     /product="small ribosomal subunit protein uS5m"
                     /calculated_mol_wt=47842
     Region          217..372
                     /region_name="rpsE_bact"
                     /note="ribosomal protein S5, bacterial/organelle type;
                     TIGR01021"
                     /db_xref="CDD:130093"
     CDS             1..430
                     /gene="MRPS5"
                     /coded_by="XM_061156033.1:177..1469"
                     /db_xref="GeneID:133065219"
ORIGIN      
        1 maaavraagf lhalcgasag hlwsrqlhln tfpaasiwal kavpsngpls pagardschf
       61 tslarvlqtq cclsapssla aqqhrsysff tkltadelwk galaetgaga rkgrgkrtkr
      121 krrkdlnrgq iigegrrgfl wpglnaplmk sgaiqtitqr skeeqekvqa dmvqqreewd
      181 rkrkmkvkre rgwsgnswgg islgppdpgp ngetyddfdt rilevrnvfn mtakegrkrs
      241 vrvlvavgng rgaagfaigk ateradafrk aknravhylh yieryedhti yhdisltfkr
      301 thikmkkqpr gyglrchrai tticrligik dmyakvsgsv nmlnltrglf qglsrqethq
      361 qladkkslhv vefreecgpl pivvaspqga lrkdpepede vpdikldwdd vkaeqgmkrs
      421 vwsglkraat
//
LOCUS       XP_061012017             228 aa            linear   MAM 02-DEC-2023
DEFINITION  MAL-like protein isoform X1 [Dama dama].
ACCESSION   XP_061012017
VERSION     XP_061012017.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156034.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..228
                     /product="MAL-like protein isoform X1"
                     /calculated_mol_wt=25597
     Region          23..>97
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     CDS             1..228
                     /gene="LOC133065220"
                     /coded_by="XM_061156034.1:79..765"
                     /db_xref="GeneID:133065220"
ORIGIN      
        1 masrdppats happdvppgv slfltipyaf flpelifgvw vwilvaatqv aspllqgwvm
       61 yvsltsflis lmlllsymfg fykryeswki lmlgielkvh spaqggvlls rwslfclfpp
      121 snghefeqtp sdsevvakpr ktpeflasrg eefnprpvtr liaqnfsdsl yhgttgilym
      181 saavlqvhat imseiqdlkn yyintaasff afittllyil hafsiyyh
//
LOCUS       XP_061012018             195 aa            linear   MAM 02-DEC-2023
DEFINITION  MAL-like protein isoform X2 [Dama dama].
ACCESSION   XP_061012018
VERSION     XP_061012018.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156035.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..195
                     /product="MAL-like protein isoform X2"
                     /calculated_mol_wt=21859
     Region          23..190
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     CDS             1..195
                     /gene="LOC133065220"
                     /coded_by="XM_061156035.1:78..665"
                     /db_xref="GeneID:133065220"
ORIGIN      
        1 masrdppats happdvppgv slfltipyaf flpelifgvw vwilvaatqv aspllqgwvm
       61 yvsltsflis lmlllsymfg fykryeswki lmlgielkvh spaqggvlls rwslfclfpp
      121 snghefeqtp sdsedslyhg ttgilymsaa vlqvhatims eiqdlknyyi ntaasffafi
      181 ttllyilhaf siyyh
//
LOCUS       XP_061012019             152 aa            linear   MAM 02-DEC-2023
DEFINITION  MAL-like protein isoform X3 [Dama dama].
ACCESSION   XP_061012019
VERSION     XP_061012019.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156036.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..152
                     /product="MAL-like protein isoform X3"
                     /calculated_mol_wt=17134
     Region          23..147
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     CDS             1..152
                     /gene="LOC133065220"
                     /coded_by="XM_061156036.1:71..529"
                     /db_xref="GeneID:133065220"
ORIGIN      
        1 masrdppats happdvppgv slfltipyaf flpelifgvw vwilvaatqv aspllqgwvm
       61 yvsltsflis lmlllsymfg fykryeswki ldslyhgttg ilymsaavlq vhatimseiq
      121 dlknyyinta asffafittl lyilhafsiy yh
//
LOCUS       XP_061012021             686 aa            linear   MAM 02-DEC-2023
DEFINITION  nephrocystin-1 isoform X1 [Dama dama].
ACCESSION   XP_061012021
VERSION     XP_061012021.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156038.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..686
                     /product="nephrocystin-1 isoform X1"
                     /calculated_mol_wt=77427
     Region          166..219
                     /region_name="SH3_Nephrocystin"
                     /note="Src Homology 3 domain of Nephrocystin (or
                     Nephrocystin-1); cd11770"
                     /db_xref="CDD:212704"
     Site            order(171,173,176,180,198..199,213,215..216)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212704"
     CDS             1..686
                     /gene="NPHP1"
                     /coded_by="XM_061156038.1:46..2106"
                     /db_xref="GeneID:133065222"
ORIGIN      
        1 mlarrqrdpl qslqrrsqel kqqvdgllfe srlkgaleas krrniyqrci qlkqaidenk
       61 nalqkltkad epapvgnylq kkeeehnlld klthqlqela vsisrengte tgaltereee
      121 ensaeedeee ddeeesaesg gedeeteeee eekqegeshp ettsgeyial gdfmaqqvgd
      181 ltfkkgeilc iikknsdgww maknakgnkg lipktylepy nkeegqesse egseedtevg
      241 deaaegpevk qrtdshwsav rkaiseqint vdvlttmgav pagfrpstlf qlleegnqfr
      301 asyflqpelt lsqlafrdlm wdaktgsirs rpsrvslilt lwsckviplp gvsiqvlsrh
      361 vrlclfdgse vlsnihtvra twqpkkpktw tfspqvtgil pclldgdcfi rsnssspdlg
      421 ilfelgisyi rnstgergel scgwvflklf datgipipak tyklflnggt pyekgvevdp
      481 svsrrghgsv fhqlmtmrrq pqllvklrsl nrrsrstlsl lpetligsmc cvhllifyrq
      541 ilgdvllkdr mslssadlis npvlatfpkl leesdimdal rsswaekest lkrsekrdre
      601 lltavfllvy hdcvlpllhs allppfrwae eeteaarwkv iadflkqnqe negvlqvlls
      661 pegvhepfdi seqtydflge rrknia
//
LOCUS       XP_061012022             685 aa            linear   MAM 02-DEC-2023
DEFINITION  nephrocystin-1 isoform X2 [Dama dama].
ACCESSION   XP_061012022
VERSION     XP_061012022.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156039.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..685
                     /product="nephrocystin-1 isoform X2"
                     /calculated_mol_wt=77299
     Region          166..219
                     /region_name="SH3_Nephrocystin"
                     /note="Src Homology 3 domain of Nephrocystin (or
                     Nephrocystin-1); cd11770"
                     /db_xref="CDD:212704"
     Site            order(171,173,176,180,198..199,213,215..216)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212704"
     CDS             1..685
                     /gene="NPHP1"
                     /coded_by="XM_061156039.1:46..2103"
                     /db_xref="GeneID:133065222"
ORIGIN      
        1 mlarrqrdpl qslqrrsqel kqqvdgllfe srlkgaleas krrniyqrci qlkqaidenk
       61 nalqkltkad epapvgnylq kkeeehnlld klthqlqela vsisrengte tgaltereee
      121 ensaeedeee ddeeesaesg gedeeteeee eekqegeshp ettsgeyial gdfmaqqvgd
      181 ltfkkgeilc iikknsdgww maknakgnkg lipktylepy nkeegqesse egseedtevg
      241 deaaegpevk qrtdshwsav rkaiseintv dvlttmgavp agfrpstlfq lleegnqfra
      301 syflqpeltl sqlafrdlmw daktgsirsr psrvsliltl wsckviplpg vsiqvlsrhv
      361 rlclfdgsev lsnihtvrat wqpkkpktwt fspqvtgilp clldgdcfir snssspdlgi
      421 lfelgisyir nstgergels cgwvflklfd atgipipakt yklflnggtp yekgvevdps
      481 vsrrghgsvf hqlmtmrrqp qllvklrsln rrsrstlsll petligsmcc vhllifyrqi
      541 lgdvllkdrm slssadlisn pvlatfpkll eesdimdalr sswaekestl krsekrdrel
      601 ltavfllvyh dcvlpllhsa llppfrwaee eteaarwkvi adflkqnqen egvlqvllsp
      661 egvhepfdis eqtydflger rknia
//
LOCUS       XP_061012023             664 aa            linear   MAM 02-DEC-2023
DEFINITION  nephrocystin-1 isoform X3 [Dama dama].
ACCESSION   XP_061012023
VERSION     XP_061012023.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156040.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..664
                     /product="nephrocystin-1 isoform X3"
                     /calculated_mol_wt=74710
     Region          144..197
                     /region_name="SH3_Nephrocystin"
                     /note="Src Homology 3 domain of Nephrocystin (or
                     Nephrocystin-1); cd11770"
                     /db_xref="CDD:212704"
     Site            order(149,151,154,158,176..177,191,193..194)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212704"
     CDS             1..664
                     /gene="NPHP1"
                     /coded_by="XM_061156040.1:143..2137"
                     /db_xref="GeneID:133065222"
ORIGIN      
        1 mvdgllfesr lkgaleaskr rniyqrciql kqaidenkna lqkltkadep apvgnylqkk
       61 eeehnlldkl thqlqelavs isrengtetg altereeeen saeedeeedd eeesaesgge
      121 deeteeeeee kqegeshpet tsgeyialgd fmaqqvgdlt fkkgeilcii kknsdgwwma
      181 knakgnkgli pktylepynk eegqesseeg seedtevgde aaegpevkqr tdshwsavrk
      241 aiseqintvd vlttmgavpa gfrpstlfql leegnqfras yflqpeltls qlafrdlmwd
      301 aktgsirsrp srvsliltlw sckviplpgv siqvlsrhvr lclfdgsevl snihtvratw
      361 qpkkpktwtf spqvtgilpc lldgdcfirs nssspdlgil felgisyirn stgergelsc
      421 gwvflklfda tgipipakty klflnggtpy ekgvevdpsv srrghgsvfh qlmtmrrqpq
      481 llvklrslnr rsrstlsllp etligsmccv hllifyrqil gdvllkdrms lssadlisnp
      541 vlatfpklle esdimdalrs swaekestlk rsekrdrell tavfllvyhd cvlpllhsal
      601 lppfrwaeee teaarwkvia dflkqnqene gvlqvllspe gvhepfdise qtydflgerr
      661 knia
//
LOCUS       XP_061012024             768 aa            linear   MAM 02-DEC-2023
DEFINITION  two pore channel protein 2-like [Dama dama].
ACCESSION   XP_061012024
VERSION     XP_061012024.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156041.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..768
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..768
                     /product="two pore channel protein 2-like"
                     /calculated_mol_wt=87828
     Region          59..286
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          406..>559
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     CDS             1..768
                     /gene="LOC133065223"
                     /coded_by="XM_061156041.1:104..2410"
                     /db_xref="GeneID:133065223"
ORIGIN      
        1 mpgdsraagt hrsrpsssee ppdledqdll laaayvsdaq ynrnvpfets ppairlyhfy
       61 nhwtmraaty ffiwvdlala lfeepavfpl pflvtsiaev lcltaffgrl vhfakvtpqk
      121 vfwkdtknic vmvtivltli dlviyaslea vnirgvrwsr alrpvflinf pesrqirraf
      181 rsirntlpdv lyvfllflfs mmifslmalk lfgdrglrtv egspyftnvl diafelyvlv
      241 ttanspdvmm payelnwwys lyfityiiin tylfmsvfla vvynnyrkhl kneihtlayl
      301 krhkmteafn ilkvkvgtvf vvkearwrql vkvvapdiss shlelllris degqtghvdk
      361 mnflrladll nirvvainik rhpletwmpr vyqsstsllv qkmvqhrifv wvydviilin
      421 tifialdekd slisyaewlf lslyiieill klytyepray fgrnqfwnwf dtliiiaall
      481 atvanttiqa rkynsqqild ivlilrilrl lrvivsiqrf rvivttlini gptmltfggl
      541 vlvvyyafai igmeafhgkv hfldpgsgsp dalacgnpal kdsafargry cknnfndlas
      601 slillteltv vnqwhiladg falvthqaak lyfigfhvvv vilivnifia fileaffvay
      661 slekseveta iekkiqelgv gvqeeevqdg glidhmdtkd sgfsaddgdn rkkalkglyf
      721 riaskkyktv dtllqqmfes eiapegkdps leeilnfspk kpnfdnsa
//
LOCUS       XP_061012025            1084 aa            linear   MAM 02-DEC-2023
DEFINITION  mitotic checkpoint serine/threonine-protein kinase BUB1 isoform X1
            [Dama dama].
ACCESSION   XP_061012025
VERSION     XP_061012025.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156042.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1084
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1084
                     /product="mitotic checkpoint serine/threonine-protein
                     kinase BUB1 isoform X1"
                     /calculated_mol_wt=121539
     Region          6..126
                     /region_name="Mad3_BUB1_I"
                     /note="Mad3/BUB1 homology region 1; pfam08311"
                     /db_xref="CDD:462420"
     Region          784..1072
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(791..794,797,799,817,819,848,864..867,915,919..920,
                     922,944..945)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..1084
                     /gene="BUB1"
                     /coded_by="XM_061156042.1:118..3372"
                     /db_xref="GeneID:133065224"
ORIGIN      
        1 mdnpenvfqm feahmqsykg ddplgewesy mrwveenfpe nkeylttlle hlmkefldkk
       61 ryhndprfin yclkfaecns dlhqffefly nhgigtqaap lyiawaghle gqgerqhasa
      121 vfrrgiqnqa eprellqqqy rmfqarltet hlpaqvrpse plhdaqilnq mvtskshpgs
      181 nsacisknqg pqlsgatpaa gdkgsnmqvq eqrvitisks gysahpsvad nadvqqvvmy
      241 ckeklirges efsfeelraq kynlrrkheq wvneerhymk rkeanaleeq llkqkmdelh
      301 kklhqvvels qenlpssqgt skvspaclep htasqqelra pglpaipqqt lknvdekpre
      361 assvplmana vttalvspav nqgvacpgpl agqpgmdamf sgasrdarcv nksthefrpq
      421 sgaeikegce tqkvvntssf httpntslgl vqatpskaqp sptvhtkeal gfimnvfqap
      481 tlpdisddke ewpslgqnaf eaqfqknaps sgawgvnkii sslssafpvf edgnkenygl
      541 pqlknkpaga rtfgersvsr fpakpnevph teeflddstv wgvrcnksla pspkspgdfr
      601 saaqlastpf hrlpvdsghp ledkenmvan qhthvaldsc erskveplke rkfspaeets
      661 pdpvcptdgp lasllrlgqp aaavltrepe qgleackatd pdfataedpa easaglqael
      721 mqadslgnvd apnftvenpw deelilklls glskpvssyp ntyewacklp aikpktefrl
      781 gsllvyvdhf lgegafaqvy evthgdvnns knkekfalkv qkppnlwefy igtqlmerlk
      841 psmqhmfikf ysahlfqngs vlvgdlysyg tllnainlyk ntpekvmpqa lvlafairml
      901 cmiqqvhdce iihgdikpdn filgnrfleq dskdddlsag lvlidlgqsi dmklfpkgta
      961 ftgkcetsgf qciemlsnkp wnyqidyfgv aatvycmlfg tymkvknegd iwkpeglfrr
     1021 lphldmwnef fhimlnipdc hhlpsldllr qklkkifqeh ytskiktlcn rlivllleyk
     1081 rsrk
//
LOCUS       XP_061012026            1081 aa            linear   MAM 02-DEC-2023
DEFINITION  mitotic checkpoint serine/threonine-protein kinase BUB1 isoform X2
            [Dama dama].
ACCESSION   XP_061012026
VERSION     XP_061012026.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156043.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1081
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1081
                     /product="mitotic checkpoint serine/threonine-protein
                     kinase BUB1 isoform X2"
                     /calculated_mol_wt=121184
     Region          6..126
                     /region_name="Mad3_BUB1_I"
                     /note="Mad3/BUB1 homology region 1; pfam08311"
                     /db_xref="CDD:462420"
     Region          781..1069
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(788..791,794,796,814,816,845,861..864,912,916..917,
                     919,941..942)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..1081
                     /gene="BUB1"
                     /coded_by="XM_061156043.1:118..3363"
                     /db_xref="GeneID:133065224"
ORIGIN      
        1 mdnpenvfqm feahmqsykg ddplgewesy mrwveenfpe nkeylttlle hlmkefldkk
       61 ryhndprfin yclkfaecns dlhqffefly nhgigtqaap lyiawaghle gqgerqhasa
      121 vfrrgiqnqa eprellqqqy rmfqarltet hlpaqvrpse plhdaqilnq mvtskshpgs
      181 nsacisknqg pqlsgatpaa gdkgsnmeqr vitisksgys ahpsvadnad vqqvvmycke
      241 klirgesefs feelraqkyn lrrkheqwvn eerhymkrke analeeqllk qkmdelhkkl
      301 hqvvelsqen lpssqgtskv spaclephta sqqelrapgl paipqqtlkn vdekpreass
      361 vplmanavtt alvspavnqg vacpgplagq pgmdamfsga srdarcvnks thefrpqsga
      421 eikegcetqk vvntssfhtt pntslglvqa tpskaqpspt vhtkealgfi mnvfqaptlp
      481 disddkeewp slgqnafeaq fqknapssga wgvnkiissl ssafpvfedg nkenyglpql
      541 knkpagartf gersvsrfpa kpnevphtee flddstvwgv rcnkslapsp kspgdfrsaa
      601 qlastpfhrl pvdsghpled kenmvanqht hvaldscers kveplkerkf spaeetspdp
      661 vcptdgplas llrlgqpaaa vltrepeqgl eackatdpdf ataedpaeas aglqaelmqa
      721 dslgnvdapn ftvenpwdee lilkllsgls kpvssypnty ewacklpaik pktefrlgsl
      781 lvyvdhflge gafaqvyevt hgdvnnsknk ekfalkvqkp pnlwefyigt qlmerlkpsm
      841 qhmfikfysa hlfqngsvlv gdlysygtll nainlykntp ekvmpqalvl afairmlcmi
      901 qqvhdceiih gdikpdnfil gnrfleqdsk dddlsaglvl idlgqsidmk lfpkgtaftg
      961 kcetsgfqci emlsnkpwny qidyfgvaat vycmlfgtym kvknegdiwk peglfrrlph
     1021 ldmwneffhi mlnipdchhl psldllrqkl kkifqehyts kiktlcnrli vllleykrsr
     1081 k
//
LOCUS       XP_061012027            1075 aa            linear   MAM 02-DEC-2023
DEFINITION  mitotic checkpoint serine/threonine-protein kinase BUB1 isoform X3
            [Dama dama].
ACCESSION   XP_061012027
VERSION     XP_061012027.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156044.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1075
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1075
                     /product="mitotic checkpoint serine/threonine-protein
                     kinase BUB1 isoform X3"
                     /calculated_mol_wt=120464
     Region          1..117
                     /region_name="Mad3_BUB1_I"
                     /note="Mad3/BUB1 homology region 1; pfam08311"
                     /db_xref="CDD:462420"
     Region          775..1063
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(782..785,788,790,808,810,839,855..858,906,910..911,
                     913,935..936)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..1075
                     /gene="BUB1"
                     /coded_by="XM_061156044.1:179..3406"
                     /db_xref="GeneID:133065224"
ORIGIN      
        1 mfeahmqsyk gddplgewes ymrwveenfp enkeylttll ehlmkefldk kryhndprfi
       61 nyclkfaecn sdlhqffefl ynhgigtqaa plyiawaghl egqgerqhas avfrrgiqnq
      121 aeprellqqq yrmfqarlte thlpaqvrps eplhdaqiln qmvtskshpg snsacisknq
      181 gpqlsgatpa agdkgsnmqv qeqrvitisk sgysahpsva dnadvqqvvm yckeklirge
      241 sefsfeelra qkynlrrkhe qwvneerhym krkeanalee qllkqkmdel hkklhqvvel
      301 sqenlpssqg tskvspacle phtasqqelr apglpaipqq tlknvdekpr eassvplman
      361 avttalvspa vnqgvacpgp lagqpgmdam fsgasrdarc vnksthefrp qsgaeikegc
      421 etqkvvntss fhttpntslg lvqatpskaq psptvhtkea lgfimnvfqa ptlpdisddk
      481 eewpslgqna feaqfqknap ssgawgvnki isslssafpv fedgnkenyg lpqlknkpag
      541 artfgersvs rfpakpnevp hteeflddst vwgvrcnksl apspkspgdf rsaaqlastp
      601 fhrlpvdsgh pledkenmva nqhthvalds cerskveplk erkfspaeet spdpvcptdg
      661 plasllrlgq paaavltrep eqgleackat dpdfataedp aeasaglqae lmqadslgnv
      721 dapnftvenp wdeelilkll sglskpvssy pntyewackl paikpktefr lgsllvyvdh
      781 flgegafaqv yevthgdvnn sknkekfalk vqkppnlwef yigtqlmerl kpsmqhmfik
      841 fysahlfqng svlvgdlysy gtllnainly kntpekvmpq alvlafairm lcmiqqvhdc
      901 eiihgdikpd nfilgnrfle qdskdddlsa glvlidlgqs idmklfpkgt aftgkcetsg
      961 fqciemlsnk pwnyqidyfg vaatvycmlf gtymkvkneg diwkpeglfr rlphldmwne
     1021 ffhimlnipd chhlpsldll rqklkkifqe hytskiktlc nrlivllley krsrk
//
LOCUS       XP_061012028             241 aa            linear   MAM 02-DEC-2023
DEFINITION  bcl-2-like protein 11 isoform X1 [Dama dama].
ACCESSION   XP_061012028
VERSION     XP_061012028.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156045.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..241
                     /product="bcl-2-like protein 11 isoform X1"
                     /calculated_mol_wt=25328
     Region          4..39
                     /region_name="Bim_N"
                     /note="Bim protein N-terminus; pfam06773"
                     /db_xref="CDD:429111"
     CDS             1..241
                     /gene="BCL2L11"
                     /coded_by="XM_061156045.1:214..939"
                     /db_xref="GeneID:133065225"
ORIGIN      
        1 makqpsdvss ecdreggqlq paerppqlrp gaptslqter qgnpegeggd rcpqgspqgp
       61 lappaspgpf atrsplfifv rrssllsrss sgyfsfdtdr spapmscdks tqtpsppcqa
      121 fnhylsamgp rastgcrgpp adgslpraal hrapgvenav tarsaelvlg rpalragsrc
      181 sgalgvqpag lrwkgrrras rhvpgghhaa sgpdlclfit mrptfqrklv vnvneggilf
      241 f
//
LOCUS       XP_061012029             196 aa            linear   MAM 02-DEC-2023
DEFINITION  bcl-2-like protein 11 isoform X2 [Dama dama].
ACCESSION   XP_061012029
VERSION     XP_061012029.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156046.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..196
                     /product="bcl-2-like protein 11 isoform X2"
                     /calculated_mol_wt=21668
     Region          4..39
                     /region_name="Bim_N"
                     /note="Bim protein N-terminus; pfam06773"
                     /db_xref="CDD:429111"
     Region          130..165
                     /region_name="Bclx_interact"
                     /note="Bcl-x interacting, BH3 domain; pfam08945"
                     /db_xref="CDD:462643"
     CDS             1..196
                     /gene="BCL2L11"
                     /coded_by="XM_061156046.1:200..790"
                     /db_xref="GeneID:133065225"
ORIGIN      
        1 makqpsdvss ecdreggqlq paerppqlrp gaptslqter qgnpegeggd rcpqgspqgp
       61 lappaspgpf atrsplfifv rrssllsrss sgyfsfdtdr spapmscdks tqtpsppcqa
      121 fnhylsamas mrqsqavpad trpeiwiaqe lrrigdefna yyprrvlvhp qavegrpqmv
      181 lfrvlryivr lvwrmq
//
LOCUS       XP_061012030             319 aa            linear   MAM 02-DEC-2023
DEFINITION  bcl-2-like protein 11 isoform X3 [Dama dama].
ACCESSION   XP_061012030
VERSION     XP_061012030.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156047.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..319
                     /product="bcl-2-like protein 11 isoform X3"
                     /calculated_mol_wt=33901
     Region          82..117
                     /region_name="Bim_N"
                     /note="Bim protein N-terminus; pfam06773"
                     /db_xref="CDD:429111"
     CDS             1..319
                     /gene="BCL2L11"
                     /coded_by="XM_061156047.1:246..1205"
                     /db_xref="GeneID:133065225"
ORIGIN      
        1 msdpnsrtek rkaevlgccc lrplsgtclg alprlralcg rcqtqdpqta rdkrassdrr
       61 ghavdeplai eparkkdqma kqpsdvssec dreggqlqpa erppqlrpga ptslqterqg
      121 npegeggdrc pqgspqgpla ppaspgpfat rsplfifvrr ssllsrsssg yfsfdtdrsp
      181 apmscdkstq tpsppcqafn hylsamgpra stgcrgppad gslpraalhr apgvenavta
      241 rsaelvlgrp alragsrcsg algvqpaglr wkgrrrasrh vpgghhaasg pdlclfitmr
      301 ptfqrklvvn vneggilff
//
LOCUS       XP_061012031             109 aa            linear   MAM 02-DEC-2023
DEFINITION  bcl-2-like protein 11 isoform X4 [Dama dama].
ACCESSION   XP_061012031
VERSION     XP_061012031.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156048.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..109
                     /product="bcl-2-like protein 11 isoform X4"
                     /calculated_mol_wt=12493
     Region          4..39
                     /region_name="Bim_N"
                     /note="Bim protein N-terminus; pfam06773"
                     /db_xref="CDD:429111"
     Region          43..78
                     /region_name="Bclx_interact"
                     /note="Bcl-x interacting, BH3 domain; pfam08945"
                     /db_xref="CDD:462643"
     CDS             1..109
                     /gene="BCL2L11"
                     /coded_by="XM_061156048.1:209..538"
                     /db_xref="GeneID:133065225"
ORIGIN      
        1 makqpsdvss ecdreggqlq paerppqlrp gaptslqter qasmrqsqav padtrpeiwi
       61 aqelrrigde fnayyprrvl vhpqavegrp qmvlfrvlry ivrlvwrmq
//
LOCUS       XP_061012032             241 aa            linear   MAM 02-DEC-2023
DEFINITION  bcl-2-like protein 11 isoform X1 [Dama dama].
ACCESSION   XP_061012032
VERSION     XP_061012032.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156049.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..241
                     /product="bcl-2-like protein 11 isoform X1"
                     /calculated_mol_wt=25328
     Region          4..39
                     /region_name="Bim_N"
                     /note="Bim protein N-terminus; pfam06773"
                     /db_xref="CDD:429111"
     CDS             1..241
                     /gene="BCL2L11"
                     /coded_by="XM_061156049.1:291..1016"
                     /db_xref="GeneID:133065225"
ORIGIN      
        1 makqpsdvss ecdreggqlq paerppqlrp gaptslqter qgnpegeggd rcpqgspqgp
       61 lappaspgpf atrsplfifv rrssllsrss sgyfsfdtdr spapmscdks tqtpsppcqa
      121 fnhylsamgp rastgcrgpp adgslpraal hrapgvenav tarsaelvlg rpalragsrc
      181 sgalgvqpag lrwkgrrras rhvpgghhaa sgpdlclfit mrptfqrklv vnvneggilf
      241 f
//
LOCUS       XP_061012033             241 aa            linear   MAM 02-DEC-2023
DEFINITION  bcl-2-like protein 11 isoform X1 [Dama dama].
ACCESSION   XP_061012033
VERSION     XP_061012033.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156050.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..241
                     /product="bcl-2-like protein 11 isoform X1"
                     /calculated_mol_wt=25328
     Region          4..39
                     /region_name="Bim_N"
                     /note="Bim protein N-terminus; pfam06773"
                     /db_xref="CDD:429111"
     CDS             1..241
                     /gene="BCL2L11"
                     /coded_by="XM_061156050.1:194..919"
                     /db_xref="GeneID:133065225"
ORIGIN      
        1 makqpsdvss ecdreggqlq paerppqlrp gaptslqter qgnpegeggd rcpqgspqgp
       61 lappaspgpf atrsplfifv rrssllsrss sgyfsfdtdr spapmscdks tqtpsppcqa
      121 fnhylsamgp rastgcrgpp adgslpraal hrapgvenav tarsaelvlg rpalragsrc
      181 sgalgvqpag lrwkgrrras rhvpgghhaa sgpdlclfit mrptfqrklv vnvneggilf
      241 f
//
LOCUS       XP_061012034             241 aa            linear   MAM 02-DEC-2023
DEFINITION  bcl-2-like protein 11 isoform X1 [Dama dama].
ACCESSION   XP_061012034
VERSION     XP_061012034.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156051.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..241
                     /product="bcl-2-like protein 11 isoform X1"
                     /calculated_mol_wt=25328
     Region          4..39
                     /region_name="Bim_N"
                     /note="Bim protein N-terminus; pfam06773"
                     /db_xref="CDD:429111"
     CDS             1..241
                     /gene="BCL2L11"
                     /coded_by="XM_061156051.1:146..871"
                     /db_xref="GeneID:133065225"
ORIGIN      
        1 makqpsdvss ecdreggqlq paerppqlrp gaptslqter qgnpegeggd rcpqgspqgp
       61 lappaspgpf atrsplfifv rrssllsrss sgyfsfdtdr spapmscdks tqtpsppcqa
      121 fnhylsamgp rastgcrgpp adgslpraal hrapgvenav tarsaelvlg rpalragsrc
      181 sgalgvqpag lrwkgrrras rhvpgghhaa sgpdlclfit mrptfqrklv vnvneggilf
      241 f
//
LOCUS       XP_061012035            1943 aa            linear   MAM 02-DEC-2023
DEFINITION  anaphase-promoting complex subunit 1 isoform X1 [Dama dama].
ACCESSION   XP_061012035
VERSION     XP_061012035.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156052.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1943
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1943
                     /product="anaphase-promoting complex subunit 1 isoform X1"
                     /calculated_mol_wt=215820
     Region          1..136
                     /region_name="Apc1_N"
                     /note="Anaphase-promoting complex subunit 1 N-terminal;
                     pfam19521"
                     /db_xref="CDD:437353"
     Region          151..359
                     /region_name="ANAPC1"
                     /note="Anaphase-promoting complex subunit 1 WD40
                     beta-propeller domain; pfam12859"
                     /db_xref="CDD:463732"
     Region          614..984
                     /region_name="Apc1_MidN"
                     /note="Anaphase-promoting complex subunit 1 middle domain;
                     pfam20518"
                     /db_xref="CDD:466667"
     Region          1466..1500
                     /region_name="PC_rep"
                     /note="Proteasome/cyclosome repeat; pfam01851"
                     /db_xref="CDD:460361"
     Region          1738..1894
                     /region_name="APC1_C"
                     /note="Anaphase-promoting complex sub unit 1 C-terminal
                     domain; pfam18122"
                     /db_xref="CDD:465659"
     CDS             1..1943
                     /gene="ANAPC1"
                     /coded_by="XM_061156052.1:283..6114"
                     /db_xref="GeneID:133065232"
ORIGIN      
        1 msnfyeerat miaagdlqef vpfgrdhckh hpnalnlqlr qlqpaselws sdgaaglvgs
       61 lqevtihekq keswqlrkgv seigeevdyd eelymagnmv iwskgsksqa lavykaftvd
      121 spvqqalwcd fiisqdksdk dyssdevekc icilqsscin mhsiegkdyi aslpfqvanv
      181 wptkygllfe rsnsscevpp gppreplptl fsmlhpldei tplvcksagl fgssrvqyvv
      241 dhamkivflh tdpsivmtyd tvqglhsvwa lrrvkteegs avlkfseqgg tpqnvatsss
      301 ltahlrslsk gdspvgspfq nfssihsqsr sasspslhsr spsisnmaal srahspalgv
      361 ysfsgvqrfs lsshsqspkr hsfshspssn sngsflapet epivpelcid hlwtetvprl
      421 rkknsqaskv fitsdlcgqk flcylvesel qlrcvkfqes ndktqlifgs vtniqakdaa
      481 pvekidtmlv lessgnlvly tgvvrvgkvf ipglpapslt msnamprpst pldgvttanp
      541 lskllgslde vlvspvpelr dssklhdsly nedctfqqlg tyihsirdpv rnrvtlelsn
      601 gsmvritipe iatselvqtc lqaikfilpk eiavqmlvkw ysvhsapggp sdhsewnlfv
      661 tclmnmmgyn tdrlawtrnf dfegslspvi apkkarpset gsdddweyll ssdyhqnves
      721 hlldrslcls plgvsqmkde dfsqnlslds stllfthipa iffvlhlvye elklntlmge
      781 gvrslvellv qlardlklep yvdhyyrdyp tlvrttgqvc tidqgqtgfm qypsfftpep
      841 psvyqwvssc lkgegmppyp ylpgicergr lvvlsialyi lgdesslsde ssqylsrisi
      901 apqkpqaeqe esrlsfrhst svsslgerlv vwmtnvgftl rdletlpfgi alpirdaiyh
      961 creqpasdwp eavclligrq dlskqacegn lpkgksvlss dvpsgtetee eddgmndmnq
     1021 evmsliwsed lrvqdvrrll qsahpvrvnv vqypelsdhe fieekenrll qlcqrtmalp
     1081 vgrgmftlfs yhpvpteplp ipklnltgra pprnttvdln sgnidvppnm tswasfhngv
     1141 aaglkiapas qidsawivyn kpkhaelane yagflmalgl nghltklatl nihdyltkgh
     1201 emtsiglllg vaaaklgtmd msvtrllsih ipallpptst eldvphnvqv aavvgiglvy
     1261 qgtahrhtae vllaeigrpp gpemeyctdr esyslaagla lgmvclghgs nligmsdlnv
     1321 peqlyqymvg ghrrfqagmh rekhkspsyq ikegdtinvd vtcpgatlal amiylktnnr
     1381 siadwlrapd tmylldfvkp eflllrtlar clilwddilp nskwvdsnvp qiirensisl
     1441 seielpcsed lnletlsqah vyiiagacls lgfrfagsen lsafnclhkf akdfmtylsa
     1501 pnasvtgpyn letclsvvll slamvmagsg nlkvlqlcrf lhmktggemn ygfhlahhma
     1561 lgllflgggr yslstsdssi aallcalyph fpahstdnry hlqalrhlyv laaeprllvp
     1621 vdvdtnmpcy allevtykgt qwyeqtkeel maptllpelh llkqikvkgp rywellidls
     1681 kgtqhlksil skdgvlyvkl ragqlsyked pmgwqsllaq tvanrnsear afkpetistf
     1741 tsdpallsfa eyfckptvnv gqkqelldlf ssvlyecvtq etpemlpayi amdqavrrlg
     1801 rremsetsdl wqiklvleff ssrshqerlq nqpkrglfmn seflpvvkct idnildqwlq
     1861 aggdrcvhay lngqpceepq lsmlacflvy havpapqrlp saglegstsf aellfrfkql
     1921 kmpvrallrl aplllgnpqp mvm
//
LOCUS       XP_061012036            1942 aa            linear   MAM 02-DEC-2023
DEFINITION  anaphase-promoting complex subunit 1 isoform X2 [Dama dama].
ACCESSION   XP_061012036
VERSION     XP_061012036.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156053.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1942
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1942
                     /product="anaphase-promoting complex subunit 1 isoform X2"
                     /calculated_mol_wt=215692
     Region          1..136
                     /region_name="Apc1_N"
                     /note="Anaphase-promoting complex subunit 1 N-terminal;
                     pfam19521"
                     /db_xref="CDD:437353"
     Region          151..359
                     /region_name="ANAPC1"
                     /note="Anaphase-promoting complex subunit 1 WD40
                     beta-propeller domain; pfam12859"
                     /db_xref="CDD:463732"
     Region          613..983
                     /region_name="Apc1_MidN"
                     /note="Anaphase-promoting complex subunit 1 middle domain;
                     pfam20518"
                     /db_xref="CDD:466667"
     Region          1465..1499
                     /region_name="PC_rep"
                     /note="Proteasome/cyclosome repeat; pfam01851"
                     /db_xref="CDD:460361"
     Region          1737..1893
                     /region_name="APC1_C"
                     /note="Anaphase-promoting complex sub unit 1 C-terminal
                     domain; pfam18122"
                     /db_xref="CDD:465659"
     CDS             1..1942
                     /gene="ANAPC1"
                     /coded_by="XM_061156053.1:283..6111"
                     /db_xref="GeneID:133065232"
ORIGIN      
        1 msnfyeerat miaagdlqef vpfgrdhckh hpnalnlqlr qlqpaselws sdgaaglvgs
       61 lqevtihekq keswqlrkgv seigeevdyd eelymagnmv iwskgsksqa lavykaftvd
      121 spvqqalwcd fiisqdksdk dyssdevekc icilqsscin mhsiegkdyi aslpfqvanv
      181 wptkygllfe rsnsscevpp gppreplptl fsmlhpldei tplvcksagl fgssrvqyvv
      241 dhamkivflh tdpsivmtyd tvqglhsvwa lrrvkteegs avlkfseqgg tpqnvatsss
      301 ltahlrslsk gdspvgspfq nfssihsqsr sasspslhsr spsisnmaal srahspalgv
      361 ysfsgvqrfs lsshsqspkr hsfshspssn sngsflapet epivpelcid hlwtetvprl
      421 rkknsqaskv fitsdlcgqk flcylvesel qlrcvkfqes ndktqlifgs vtniqakdaa
      481 pveidtmlvl essgnlvlyt gvvrvgkvfi pglpapsltm snamprpstp ldgvttanpl
      541 skllgsldev lvspvpelrd ssklhdslyn edctfqqlgt yihsirdpvr nrvtlelsng
      601 smvritipei atselvqtcl qaikfilpke iavqmlvkwy svhsapggps dhsewnlfvt
      661 clmnmmgynt drlawtrnfd fegslspvia pkkarpsetg sdddweylls sdyhqnvesh
      721 lldrslclsp lgvsqmkded fsqnlsldss tllfthipai ffvlhlvyee lklntlmgeg
      781 vrslvellvq lardlklepy vdhyyrdypt lvrttgqvct idqgqtgfmq ypsfftpepp
      841 svyqwvsscl kgegmppypy lpgicergrl vvlsialyil gdesslsdes sqylsrisia
      901 pqkpqaeqee srlsfrhsts vsslgerlvv wmtnvgftlr dletlpfgia lpirdaiyhc
      961 reqpasdwpe avclligrqd lskqacegnl pkgksvlssd vpsgteteee ddgmndmnqe
     1021 vmsliwsedl rvqdvrrllq sahpvrvnvv qypelsdhef ieekenrllq lcqrtmalpv
     1081 grgmftlfsy hpvpteplpi pklnltgrap prnttvdlns gnidvppnmt swasfhngva
     1141 aglkiapasq idsawivynk pkhaelaney agflmalgln ghltklatln ihdyltkghe
     1201 mtsiglllgv aaaklgtmdm svtrllsihi pallpptste ldvphnvqva avvgiglvyq
     1261 gtahrhtaev llaeigrppg pemeyctdre syslaaglal gmvclghgsn ligmsdlnvp
     1321 eqlyqymvgg hrrfqagmhr ekhkspsyqi kegdtinvdv tcpgatlala miylktnnrs
     1381 iadwlrapdt mylldfvkpe flllrtlarc lilwddilpn skwvdsnvpq iirensisls
     1441 eielpcsedl nletlsqahv yiiagaclsl gfrfagsenl safnclhkfa kdfmtylsap
     1501 nasvtgpynl etclsvvlls lamvmagsgn lkvlqlcrfl hmktggemny gfhlahhmal
     1561 gllflgggry slstsdssia allcalyphf pahstdnryh lqalrhlyvl aaeprllvpv
     1621 dvdtnmpcya llevtykgtq wyeqtkeelm aptllpelhl lkqikvkgpr ywellidlsk
     1681 gtqhlksils kdgvlyvklr agqlsykedp mgwqsllaqt vanrnseara fkpetistft
     1741 sdpallsfae yfckptvnvg qkqelldlfs svlyecvtqe tpemlpayia mdqavrrlgr
     1801 remsetsdlw qiklvleffs srshqerlqn qpkrglfmns eflpvvkcti dnildqwlqa
     1861 ggdrcvhayl ngqpceepql smlacflvyh avpapqrlps aglegstsfa ellfrfkqlk
     1921 mpvrallrla plllgnpqpm vm
//
LOCUS       XP_061012037            1776 aa            linear   MAM 02-DEC-2023
DEFINITION  anaphase-promoting complex subunit 1 isoform X3 [Dama dama].
ACCESSION   XP_061012037
VERSION     XP_061012037.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156054.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1776
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1776
                     /product="anaphase-promoting complex subunit 1 isoform X3"
                     /calculated_mol_wt=196720
     Region          1..136
                     /region_name="Apc1_N"
                     /note="Anaphase-promoting complex subunit 1 N-terminal;
                     pfam19521"
                     /db_xref="CDD:437353"
     Region          151..359
                     /region_name="ANAPC1"
                     /note="Anaphase-promoting complex subunit 1 WD40
                     beta-propeller domain; pfam12859"
                     /db_xref="CDD:463732"
     Region          614..984
                     /region_name="Apc1_MidN"
                     /note="Anaphase-promoting complex subunit 1 middle domain;
                     pfam20518"
                     /db_xref="CDD:466667"
     Region          1466..1500
                     /region_name="PC_rep"
                     /note="Proteasome/cyclosome repeat; pfam01851"
                     /db_xref="CDD:460361"
     Region          1738..>1776
                     /region_name="APC1_C"
                     /note="Anaphase-promoting complex sub unit 1 C-terminal
                     domain; pfam18122"
                     /db_xref="CDD:465659"
     CDS             1..1776
                     /gene="ANAPC1"
                     /coded_by="XM_061156054.1:283..5613"
                     /db_xref="GeneID:133065232"
ORIGIN      
        1 msnfyeerat miaagdlqef vpfgrdhckh hpnalnlqlr qlqpaselws sdgaaglvgs
       61 lqevtihekq keswqlrkgv seigeevdyd eelymagnmv iwskgsksqa lavykaftvd
      121 spvqqalwcd fiisqdksdk dyssdevekc icilqsscin mhsiegkdyi aslpfqvanv
      181 wptkygllfe rsnsscevpp gppreplptl fsmlhpldei tplvcksagl fgssrvqyvv
      241 dhamkivflh tdpsivmtyd tvqglhsvwa lrrvkteegs avlkfseqgg tpqnvatsss
      301 ltahlrslsk gdspvgspfq nfssihsqsr sasspslhsr spsisnmaal srahspalgv
      361 ysfsgvqrfs lsshsqspkr hsfshspssn sngsflapet epivpelcid hlwtetvprl
      421 rkknsqaskv fitsdlcgqk flcylvesel qlrcvkfqes ndktqlifgs vtniqakdaa
      481 pvekidtmlv lessgnlvly tgvvrvgkvf ipglpapslt msnamprpst pldgvttanp
      541 lskllgslde vlvspvpelr dssklhdsly nedctfqqlg tyihsirdpv rnrvtlelsn
      601 gsmvritipe iatselvqtc lqaikfilpk eiavqmlvkw ysvhsapggp sdhsewnlfv
      661 tclmnmmgyn tdrlawtrnf dfegslspvi apkkarpset gsdddweyll ssdyhqnves
      721 hlldrslcls plgvsqmkde dfsqnlslds stllfthipa iffvlhlvye elklntlmge
      781 gvrslvellv qlardlklep yvdhyyrdyp tlvrttgqvc tidqgqtgfm qypsfftpep
      841 psvyqwvssc lkgegmppyp ylpgicergr lvvlsialyi lgdesslsde ssqylsrisi
      901 apqkpqaeqe esrlsfrhst svsslgerlv vwmtnvgftl rdletlpfgi alpirdaiyh
      961 creqpasdwp eavclligrq dlskqacegn lpkgksvlss dvpsgtetee eddgmndmnq
     1021 evmsliwsed lrvqdvrrll qsahpvrvnv vqypelsdhe fieekenrll qlcqrtmalp
     1081 vgrgmftlfs yhpvpteplp ipklnltgra pprnttvdln sgnidvppnm tswasfhngv
     1141 aaglkiapas qidsawivyn kpkhaelane yagflmalgl nghltklatl nihdyltkgh
     1201 emtsiglllg vaaaklgtmd msvtrllsih ipallpptst eldvphnvqv aavvgiglvy
     1261 qgtahrhtae vllaeigrpp gpemeyctdr esyslaagla lgmvclghgs nligmsdlnv
     1321 peqlyqymvg ghrrfqagmh rekhkspsyq ikegdtinvd vtcpgatlal amiylktnnr
     1381 siadwlrapd tmylldfvkp eflllrtlar clilwddilp nskwvdsnvp qiirensisl
     1441 seielpcsed lnletlsqah vyiiagacls lgfrfagsen lsafnclhkf akdfmtylsa
     1501 pnasvtgpyn letclsvvll slamvmagsg nlkvlqlcrf lhmktggemn ygfhlahhma
     1561 lgllflgggr yslstsdssi aallcalyph fpahstdnry hlqalrhlyv laaeprllvp
     1621 vdvdtnmpcy allevtykgt qwyeqtkeel maptllpelh llkqikvkgp rywellidls
     1681 kgtqhlksil skdgvlyvkl ragqlsyked pmgwqsllaq tvanrnsear afkpetistf
     1741 tsdpallsfa eyfckptvnv gqnvrmghhs dctvvl
//
LOCUS       XP_061012038             999 aa            linear   MAM 02-DEC-2023
DEFINITION  tyrosine-protein kinase Mer isoform X1 [Dama dama].
ACCESSION   XP_061012038
VERSION     XP_061012038.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156055.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..999
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..999
                     /product="tyrosine-protein kinase Mer isoform X1"
                     /calculated_mol_wt=109928
     Region          102..176
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          198..279
                     /region_name="IgI_2_Axl_Tyro3_like"
                     /note="Second immunoglobulin (Ig)-like domain of Axl/Tyro3
                     family receptor tyrosine kinases (RTKs); member of the
                     I-set of Ig superfamily (IgSF) domains; cd05749"
                     /db_xref="CDD:409407"
     Region          198..201
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409407"
     Region          204..208
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409407"
     Region          212..221
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409407"
     Region          226..233
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409407"
     Region          235..238
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409407"
     Region          243..254
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409407"
     Region          257..266
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409407"
     Site            265..270
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:409407"
     Site            order(268..270,272)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:409407"
     Region          270..279
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409407"
     Region          <273..>504
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          284..378
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(284,351,366)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(367..368,370..371)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          579..862
                     /region_name="PTKc_Mer"
                     /note="Catalytic Domain of the Protein Tyrosine Kinase,
                     Mer; cd14204"
                     /db_xref="CDD:271106"
     Site            order(593..597,601,617,619,650,672..674,678,723,727..728,
                     730,741,759..763,772,806)
                     /site_type="active"
                     /db_xref="CDD:271106"
     Site            order(593..594,601,617,650,672..674,678,723,727..728,730,
                     741)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271106"
     Site            order(723,727,759..763,772,806)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271106"
     Site            740..765
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271106"
     CDS             1..999
                     /gene="MERTK"
                     /coded_by="XM_061156055.1:232..3231"
                     /db_xref="GeneID:133065233"
ORIGIN      
        1 mgrtvllllp wlflpelwtr ataemkegts pnppfsgslp gslqadhtpf ffphiggyqs
       61 tavsppiqpg tpdpgnvafp rvtsarskfl pplafnhtvg hiilsehkdv kfncsinipn
      121 iyqdsatisw wkdgkellga hhaitqfypd nevtaviasf sitsvqrsdn gsyvckmkin
      181 skeivsdpiy ievqglphft rqpesmnvtr dtafnltcqa vgppepvniy wvqnssrvne
      241 lpesspsvlt vpgltkttif sceahnqkgl tvsksvqini kaipspptev rvhnssahsi
      301 liswvpgfdg ysplsdcriq vkeveplshg svrvfntsas ahlyqieqlq alanysigvs
      361 cmnevgwsai spwilastte gapsvaplnv tmflnessnk vavswikppv krqdgnlvgy
      421 hishvwrnae tskefseevg qssslaqfpv qvhnatctvr iaavtkggvg pfsdpvkifi
      481 pargsidfap sstpapgnad pvliilgcfc gfvliglvly islairkriq etkfgsafte
      541 edselvisym akqsfcrrai eltlqslgvs eelqnkledv midrsllilg kilgegefgs
      601 vmegnlnqed gtsqkvavkt mkldnfsqre ieeflseaac mkdfnhpnvi rllgvciems
      661 pqgiprpmvi lpfmkygdlh tyllysrlet gpkhiplqtl lkfmvdiaqg meylsnrnfl
      721 hrdlaarncm lrddmtvcva dfglskkiys gdyyrqgria kmpvkwiaie sladrvytsk
      781 sdvwafgvtm weiatrgmtp ypgvqnhemy dyllhghrlk qpedcldely eimhlcwrae
      841 pldrptfsvl rlqleklles lpaagdkadv iyvntqfpes gegraegsal aqldlsidpd
      901 sitasctpsa tvsvvtaevh ehrpqeeryi lnggnegwee palaspatgt aeksrvlped
      961 tlvrsgvsws qsstlpsgts gpdellfadd ssegsellm
//
LOCUS       XP_061012039             975 aa            linear   MAM 02-DEC-2023
DEFINITION  tyrosine-protein kinase Mer isoform X2 [Dama dama].
ACCESSION   XP_061012039
VERSION     XP_061012039.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156056.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..975
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..975
                     /product="tyrosine-protein kinase Mer isoform X2"
                     /calculated_mol_wt=107118
     Region          78..152
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          174..255
                     /region_name="IgI_2_Axl_Tyro3_like"
                     /note="Second immunoglobulin (Ig)-like domain of Axl/Tyro3
                     family receptor tyrosine kinases (RTKs); member of the
                     I-set of Ig superfamily (IgSF) domains; cd05749"
                     /db_xref="CDD:409407"
     Region          174..177
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409407"
     Region          180..184
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409407"
     Region          188..197
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409407"
     Region          202..209
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409407"
     Region          211..214
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409407"
     Region          219..230
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409407"
     Region          233..242
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409407"
     Site            241..246
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:409407"
     Site            order(244..246,248)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:409407"
     Region          246..255
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409407"
     Region          <249..>480
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          260..354
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(260,327,342)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(343..344,346..347)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          555..838
                     /region_name="PTKc_Mer"
                     /note="Catalytic Domain of the Protein Tyrosine Kinase,
                     Mer; cd14204"
                     /db_xref="CDD:271106"
     Site            order(569..573,577,593,595,626,648..650,654,699,703..704,
                     706,717,735..739,748,782)
                     /site_type="active"
                     /db_xref="CDD:271106"
     Site            order(569..570,577,593,626,648..650,654,699,703..704,706,
                     717)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271106"
     Site            order(699,703,735..739,748,782)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271106"
     Site            716..741
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271106"
     CDS             1..975
                     /gene="MERTK"
                     /coded_by="XM_061156056.1:112..3039"
                     /db_xref="GeneID:133065233"
ORIGIN      
        1 mkegtspnpp fsgslpgslq adhtpfffph iggyqstavs ppiqpgtpdp gnvafprvts
       61 arskflppla fnhtvghiil sehkdvkfnc sinipniyqd satiswwkdg kellgahhai
      121 tqfypdnevt aviasfsits vqrsdngsyv ckmkinskei vsdpiyievq glphftrqpe
      181 smnvtrdtaf nltcqavgpp epvniywvqn ssrvnelpes spsvltvpgl tkttifscea
      241 hnqkgltvsk svqinikaip spptevrvhn ssahsilisw vpgfdgyspl sdcriqvkev
      301 eplshgsvrv fntsasahly qieqlqalan ysigvscmne vgwsaispwi lasttegaps
      361 vaplnvtmfl nessnkvavs wikppvkrqd gnlvgyhish vwrnaetske fseevgqsss
      421 laqfpvqvhn atctvriaav tkggvgpfsd pvkifiparg sidfapsstp apgnadpvli
      481 ilgcfcgfvl iglvlyisla irkriqetkf gsafteedse lvisymakqs fcrraieltl
      541 qslgvseelq nkledvmidr sllilgkilg egefgsvmeg nlnqedgtsq kvavktmkld
      601 nfsqreieef lseaacmkdf nhpnvirllg vciemspqgi prpmvilpfm kygdlhtyll
      661 ysrletgpkh iplqtllkfm vdiaqgmeyl snrnflhrdl aarncmlrdd mtvcvadfgl
      721 skkiysgdyy rqgriakmpv kwiaieslad rvytsksdvw afgvtmweia trgmtpypgv
      781 qnhemydyll hghrlkqped cldelyeimh lcwraepldr ptfsvlrlql eklleslpaa
      841 gdkadviyvn tqfpesgegr aegsalaqld lsidpdsita sctpsatvsv vtaevhehrp
      901 qeeryilngg negweepala spatgtaeks rvlpedtlvr sgvswsqsst lpsgtsgpde
      961 llfaddsseg sellm
//
LOCUS       XP_061012040             555 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 87B isoform X1 [Dama dama].
ACCESSION   XP_061012040
VERSION     XP_061012040.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156057.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..555
                     /product="transmembrane protein 87B isoform X1"
                     /calculated_mol_wt=62996
     Region          174..458
                     /region_name="Lung_7-TM_R"
                     /note="Lung seven transmembrane receptor; pfam06814"
                     /db_xref="CDD:369089"
     CDS             1..555
                     /gene="TMEM87B"
                     /coded_by="XM_061156057.1:41..1708"
                     /db_xref="GeneID:133065234"
ORIGIN      
        1 maavrrdgvw lpprrrftag rpllrfalcl lccgpaavga vpevglwtat isdksgplif
       61 rktmfnstei kfsvksfscp gpmkftiewh lehhtchney seleelsqkh elqvtedfcg
      121 hyfknsecwt tknenvecss dlqvfpplnn kqlisntgnv snqegstdvv aktqrdgfhi
      181 fivsvktekt daswnlnvsl smlgpygyis asdwplmify mvmcivyily gvlwlmwsac
      241 ywkdilriqf wiaaviflgm lekavfyaey qninssglst qgllifaeli saikrtlarl
      301 lviivslgyg ivkprlgtvm hrviglgvly fifaavegvm rvigandsdl vllaslplsl
      361 ldsglcwwif islaqtmktl rlrkntvkfs lyrhftntli failasvvfm vwttktfrfa
      421 kcqsdwmerw vddafwsflf slilivimfl wrpsannqry afmpliddsd deieefmvts
      481 enltegiklr asktvsngta kpatsdnfge dlkwveenip ssftdvalpv lvdsdeeimt
      541 rsemaekmfs sekim
//
LOCUS       XP_061012041             555 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 87B isoform X2 [Dama dama].
ACCESSION   XP_061012041
VERSION     XP_061012041.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156058.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..555
                     /product="transmembrane protein 87B isoform X2"
                     /calculated_mol_wt=62993
     Region          174..458
                     /region_name="Lung_7-TM_R"
                     /note="Lung seven transmembrane receptor; pfam06814"
                     /db_xref="CDD:369089"
     CDS             1..555
                     /gene="TMEM87B"
                     /coded_by="XM_061156058.1:36..1703"
                     /db_xref="GeneID:133065234"
ORIGIN      
        1 maavrrdgvw lpprrrftag rpllrfalcl lccgpaavga vpevglwtat isdksgplif
       61 rktmfnstei kfsvksfscp gpmkftiewh lehhtchney seleelsqkh elqvtedfcg
      121 hyfknsecwt tknenvecss dlqvfpplnn kqlisntgnv snqegstdvv aktqrdgfhi
      181 fivsvktekt daswnlnvsl smlgpygyis asdwplmify mvmcivyily gvlwlmwsac
      241 ywkdilriqf wiaaviflgm lekavfyaey qninssglst qgllifaeli saikrtlarl
      301 lviivslgyg ivkprlgtvm hrviglgvly fifaavegvm rviggsnhla vvlgdiilav
      361 idsifvwfif islaqtmktl rlrkntvkfs lyrhftntli failasvvfm vwttktfrfa
      421 kcqsdwmerw vddafwsflf slilivimfl wrpsannqry afmpliddsd deieefmvts
      481 enltegiklr asktvsngta kpatsdnfge dlkwveenip ssftdvalpv lvdsdeeimt
      541 rsemaekmfs sekim
//
LOCUS       XP_061012042             518 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 87B isoform X3 [Dama dama].
ACCESSION   XP_061012042
VERSION     XP_061012042.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156059.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..518
                     /product="transmembrane protein 87B isoform X3"
                     /calculated_mol_wt=58987
     Region          137..421
                     /region_name="Lung_7-TM_R"
                     /note="Lung seven transmembrane receptor; pfam06814"
                     /db_xref="CDD:369089"
     CDS             1..518
                     /gene="TMEM87B"
                     /coded_by="XM_061156059.1:16..1572"
                     /db_xref="GeneID:133065234"
ORIGIN      
        1 mkkeaasita avekllksgp lifrktmfns teikfsvksf scpgpmkfti ewhlehhtch
       61 neyseleels qkhelqvted fcghyfknse cwttknenve cssdlqvfpp lnnkqlisnt
      121 gnvsnqegst dvvaktqrdg fhifivsvkt ektdaswnln vslsmlgpyg yisasdwplm
      181 ifymvmcivy ilygvlwlmw sacywkdilr iqfwiaavif lgmlekavfy aeyqninssg
      241 lstqgllifa elisaikrtl arllviivsl gygivkprlg tvmhrviglg vlyfifaave
      301 gvmrviggsn hlavvlgdii lavidsifvw fifislaqtm ktlrlrkntv kfslyrhftn
      361 tlifailasv vfmvwttktf rfakcqsdwm erwvddafws flfslilivi mflwrpsann
      421 qryafmplid dsddeieefm vtsenltegi klrasktvsn gtakpatsdn fgedlkwvee
      481 nipssftdva lpvlvdsdee imtrsemaek mfssekim
//
LOCUS       XP_061012043             510 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 87B isoform X4 [Dama dama].
ACCESSION   XP_061012043
VERSION     XP_061012043.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156060.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..510
                     /product="transmembrane protein 87B isoform X4"
                     /calculated_mol_wt=57735
     Region          129..413
                     /region_name="Lung_7-TM_R"
                     /note="Lung seven transmembrane receptor; pfam06814"
                     /db_xref="CDD:369089"
     CDS             1..510
                     /gene="TMEM87B"
                     /coded_by="XM_061156060.1:40..1572"
                     /db_xref="GeneID:133065234"
ORIGIN      
        1 maavrrdgvw lpprrrftag rpllrfalcl lccgpaavga vpevglwtat isdksgplif
       61 rktmfnstei kfsvksfscp gpmkftiewh lehhtchney selenkqlis ntgnvsnqeg
      121 stdvvaktqr dgfhifivsv ktektdaswn lnvslsmlgp ygyisasdwp lmifymvmci
      181 vyilygvlwl mwsacywkdi lriqfwiaav iflgmlekav fyaeyqnins sglstqglli
      241 faelisaikr tlarllviiv slgygivkpr lgtvmhrvig lgvlyfifaa vegvmrvigg
      301 snhlavvlgd iilavidsif vwfifislaq tmktlrlrkn tvkfslyrhf tntlifaila
      361 svvfmvwttk tfrfakcqsd wmerwvddaf wsflfslili vimflwrpsa nnqryafmpl
      421 iddsddeiee fmvtsenlte giklrasktv sngtakpats dnfgedlkwv eenipssftd
      481 valpvlvdsd eeimtrsema ekmfssekim
//
LOCUS       XP_061012044             105 aa            linear   MAM 02-DEC-2023
DEFINITION  cytochrome c-like [Dama dama].
ACCESSION   XP_061012044
VERSION     XP_061012044.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156061.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..105
                     /product="cytochrome c-like"
                     /calculated_mol_wt=11547
     Region          2..100
                     /region_name="Cyc7"
                     /note="Cytochrome c2 [Energy production and conversion];
                     COG3474"
                     /db_xref="CDD:442697"
     CDS             1..105
                     /gene="LOC133065236"
                     /coded_by="XM_061156061.1:50..367"
                     /db_xref="GeneID:133065236"
ORIGIN      
        1 mgdvekgkki fvqkcaqcht vekggkhktg pnlhglfgrk tgqaagfsyt danknkgitw
       61 geetlmeyle npkkyipgtk mifagikkkg eredliaylk katde
//
LOCUS       XP_061012045             270 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger CCCH domain-containing protein 8 [Dama dama].
ACCESSION   XP_061012045
VERSION     XP_061012045.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156062.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..270
                     /product="zinc finger CCCH domain-containing protein 8"
                     /calculated_mol_wt=30531
     Region          <165..>248
                     /region_name="YTH1"
                     /note="Cleavage and polyadenylation specificity factor
                     (CPSF) Clipper subunit and related makorin family
                     Zn-finger proteins [General function prediction only];
                     COG5084"
                     /db_xref="CDD:227416"
     CDS             1..270
                     /gene="ZC3H8"
                     /coded_by="XM_061156062.1:83..895"
                     /db_xref="GeneID:133065237"
ORIGIN      
        1 mmdfenlfsk ppnpalgkks atdsdqrhsg sstspknlqh rksrskdyda ysdddicsqe
       61 pednfakelq qyiqakemas vtqsllcpea svkketakgt qkavkqknkn lkaahkngkk
      121 kkmkregpgp gdrgdaalrt sgaqgqngkp keqqqpvrms qgfinqhtvq rqgkqickyf
      181 lerkcikgdq ckfdhdaeie kkkemckfyv qgyctrgenc lylhneypck fyhtgakcyq
      241 geyckfshap ltdetqella kildperkss
//
LOCUS       XP_061012046            1194 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger CCCH domain-containing protein 6 isoform X1 [Dama
            dama].
ACCESSION   XP_061012046
VERSION     XP_061012046.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156063.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1194
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1194
                     /product="zinc finger CCCH domain-containing protein 6
                     isoform X1"
                     /calculated_mol_wt=132481
     Region          294..312
                     /region_name="zf_CCCH_4"
                     /note="Zinc finger domain; pfam18345"
                     /db_xref="CDD:465719"
     Region          316..>375
                     /region_name="zf-CCCH_3"
                     /note="Zinc-finger containing family; pfam15663"
                     /db_xref="CDD:464787"
     Region          323..341
                     /region_name="zf_CCCH_4"
                     /note="Zinc finger domain; pfam18345"
                     /db_xref="CDD:465719"
     Region          987..>1178
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..1194
                     /gene="ZC3H6"
                     /coded_by="XM_061156063.1:337..3921"
                     /db_xref="GeneID:133065238"
ORIGIN      
        1 mkrreakgkg enerythlna efqrrarrek kkyfredgel edgeiddagf eetqeqeake
       61 dekqknekay rksrkkhkke kekkkskrrk rekhkhnsps sddssdysld sevehtetah
      121 rkrsgfyrdy dipfsqhghv sgsymaskks qhnrkfrske ydeystysdd nfgsysqete
      181 edfasqlkqy rqaketsnts lgssfskepg kkqrlkgiqq gteqrvksfn vargrgllkk
      241 ikrkdrggrv nkgpnvfsgt ddyheyskpg kkwkimtqef inqhtvehkg kqickyfleg
      301 rcikgdqckf dhdaelekrk eickfylqgy ctkgenciym hnefpckfyh sgakcyqgdn
      361 ckfshddltk etkklldkvl nteeaanede releelrkhg itplpkpppg vgllptpleh
      421 fpfsdpedgf qtdlsddfkk ipslfeivvk ptvdlahkig kkppafynsa sppgpqfqes
      481 sprpqhvyss gsspgpgpnm sqghnspvmh pgspghcpgp pvpqsppllp appgtvgphg
      541 qagvlgqpdt pltppsmsga yhcpgfpeha mrvprenhcs pgsshppger qlstsyeslq
      601 npaefydhyy sqhavhnfqp psssgdgawh gdfaqhqapv vpgspdrgsg sdssgnvtgr
      661 gplpalgllp avqralfvrl tqkyqddeep sstqpqraps keedetvnwy ssseeeegss
      721 vksilrtlqk qtetlrsqqq pstelgtptd prlareknkg nqvvdprlrt isrqdirkss
      781 esapldlrla wdprklrgng sghvsssagg akfdshhgnt gpnirhkrgd dddedterel
      841 rekaflipld sspgamlqdp rsqlrqfshi kmditltkpn fakhivwape dllpvplpkp
      901 dpvssinlpl ppliadqrls rlwntksdlc qntvptdtkl aakvkintan regypdqfgd
      961 shssgsklgd prlqknfdpr lhrlhnteph qavmkdphms ktappsgars hpgssqpsga
     1021 apsssgpgal ppyapklsss aglplgtpgs vlsgislydp reqgssstse latenaenqk
     1081 ksgslkcsdk nepppgeail pqkiapnvdi pvdrpadpqt dvrqssgtvq vpavhslpiq
     1141 altglirpqy sdprqskhlg qvsptpgddp sketddkslk evfktfdpta spfc
//
LOCUS       XP_061012047            1170 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger CCCH domain-containing protein 6 isoform X2 [Dama
            dama].
ACCESSION   XP_061012047
VERSION     XP_061012047.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156064.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1170
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1170
                     /product="zinc finger CCCH domain-containing protein 6
                     isoform X2"
                     /calculated_mol_wt=129267
     Region          270..288
                     /region_name="zf_CCCH_4"
                     /note="Zinc finger domain; pfam18345"
                     /db_xref="CDD:465719"
     Region          292..>351
                     /region_name="zf-CCCH_3"
                     /note="Zinc-finger containing family; pfam15663"
                     /db_xref="CDD:464787"
     Region          299..317
                     /region_name="zf_CCCH_4"
                     /note="Zinc finger domain; pfam18345"
                     /db_xref="CDD:465719"
     Region          963..>1154
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..1170
                     /gene="ZC3H6"
                     /coded_by="XM_061156064.1:375..3887"
                     /db_xref="GeneID:133065238"
ORIGIN      
        1 mtdsehaghd redgeledge iddagfeetq eqeakedekq knekayrksr kkhkkekekk
       61 kskrrkrekh khnspssdds sdysldseve htetahrkrs gfyrdydipf sqhghvsgsy
      121 maskksqhnr kfrskeydey stysddnfgs ysqeteedfa sqlkqyrqak etsntslgss
      181 fskepgkkqr lkgiqqgteq rvksfnvarg rgllkkikrk drggrvnkgp nvfsgtddyh
      241 eyskpgkkwk imtqefinqh tvehkgkqic kyflegrcik gdqckfdhda elekrkeick
      301 fylqgyctkg enciymhnef pckfyhsgak cyqgdnckfs hddltketkk lldkvlntee
      361 aanederele elrkhgitpl pkpppgvgll ptplehfpfs dpedgfqtdl sddfkkipsl
      421 feivvkptvd lahkigkkpp afynsasppg pqfqessprp qhvyssgssp gpgpnmsqgh
      481 nspvmhpgsp ghcpgppvpq sppllpappg tvgphgqagv lgqpdtpltp psmsgayhcp
      541 gfpehamrvp renhcspgss hppgerqlst syeslqnpae fydhyysqha vhnfqppsss
      601 gdgawhgdfa qhqapvvpgs pdrgsgsdss gnvtgrgplp algllpavqr alfvrltqky
      661 qddeepsstq pqrapskeed etvnwyssse eeegssvksi lrtlqkqtet lrsqqqpste
      721 lgtptdprla reknkgnqvv dprlrtisrq dirkssesap ldlrlawdpr klrgngsghv
      781 sssaggakfd shhgntgpni rhkrgdddde dterelreka flipldsspg amlqdprsql
      841 rqfshikmdi tltkpnfakh ivwapedllp vplpkpdpvs sinlplppli adqrlsrlwn
      901 tksdlcqntv ptdtklaakv kintanregy pdqfgdshss gsklgdprlq knfdprlhrl
      961 hntephqavm kdphmsktap psgarshpgs sqpsgaapss sgpgalppya pklsssaglp
     1021 lgtpgsvlsg islydpreqg ssstselate naenqkksgs lkcsdknepp pgeailpqki
     1081 apnvdipvdr padpqtdvrq ssgtvqvpav hslpiqaltg lirpqysdpr qskhlgqvsp
     1141 tpgddpsket ddkslkevfk tfdptaspfc
//
LOCUS       XP_061012048            1153 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger CCCH domain-containing protein 6 isoform X3 [Dama
            dama].
ACCESSION   XP_061012048
VERSION     XP_061012048.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156065.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1153
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1153
                     /product="zinc finger CCCH domain-containing protein 6
                     isoform X3"
                     /calculated_mol_wt=127735
     Region          253..271
                     /region_name="zf_CCCH_4"
                     /note="Zinc finger domain; pfam18345"
                     /db_xref="CDD:465719"
     Region          275..>334
                     /region_name="zf-CCCH_3"
                     /note="Zinc-finger containing family; pfam15663"
                     /db_xref="CDD:464787"
     Region          282..300
                     /region_name="zf_CCCH_4"
                     /note="Zinc finger domain; pfam18345"
                     /db_xref="CDD:465719"
     Region          946..>1137
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..1153
                     /gene="ZC3H6"
                     /coded_by="XM_061156065.1:1061..4522"
                     /db_xref="GeneID:133065238"
ORIGIN      
        1 mkrreakgkg enerythlna efqrrarrek kkyfredgel edgeiddagf eetqeqeake
       61 dekqknekay rksrkkhkke kekkkskrrk rekhkhghvs gsymaskksq hnrkfrskey
      121 deystysddn fgsysqetee dfasqlkqyr qaketsntsl gssfskepgk kqrlkgiqqg
      181 teqrvksfnv argrgllkki krkdrggrvn kgpnvfsgtd dyheyskpgk kwkimtqefi
      241 nqhtvehkgk qickyflegr cikgdqckfd hdaelekrke ickfylqgyc tkgenciymh
      301 nefpckfyhs gakcyqgdnc kfshddltke tkklldkvln teeaaneder eleelrkhgi
      361 tplpkpppgv gllptplehf pfsdpedgfq tdlsddfkki pslfeivvkp tvdlahkigk
      421 kppafynsas ppgpqfqess prpqhvyssg sspgpgpnms qghnspvmhp gspghcpgpp
      481 vpqsppllpa ppgtvgphgq agvlgqpdtp ltppsmsgay hcpgfpeham rvprenhcsp
      541 gsshppgerq lstsyeslqn paefydhyys qhavhnfqpp sssgdgawhg dfaqhqapvv
      601 pgspdrgsgs dssgnvtgrg plpalgllpa vqralfvrlt qkyqddeeps stqpqrapsk
      661 eedetvnwys sseeeegssv ksilrtlqkq tetlrsqqqp stelgtptdp rlareknkgn
      721 qvvdprlrti srqdirksse sapldlrlaw dprklrgngs ghvsssagga kfdshhgntg
      781 pnirhkrgdd ddedterelr ekafliplds spgamlqdpr sqlrqfshik mditltkpnf
      841 akhivwaped llpvplpkpd pvssinlplp pliadqrlsr lwntksdlcq ntvptdtkla
      901 akvkintanr egypdqfgds hssgsklgdp rlqknfdprl hrlhntephq avmkdphmsk
      961 tappsgarsh pgssqpsgaa psssgpgalp pyapklsssa glplgtpgsv lsgislydpr
     1021 eqgssstsel atenaenqkk sgslkcsdkn epppgeailp qkiapnvdip vdrpadpqtd
     1081 vrqssgtvqv pavhslpiqa ltglirpqys dprqskhlgq vsptpgddps ketddkslke
     1141 vfktfdptas pfc
//
LOCUS       XP_061012049             301 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133065241 [Dama dama].
ACCESSION   XP_061012049
VERSION     XP_061012049.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156066.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..301
                     /product="uncharacterized protein LOC133065241"
                     /calculated_mol_wt=31722
     CDS             1..301
                     /gene="LOC133065241"
                     /coded_by="XM_061156066.1:1..906"
                     /db_xref="GeneID:133065241"
ORIGIN      
        1 mllvsgtavt edhkpgsleq qkgtasqlwr pvclqaailr klrgtvrslp fpapgswpat
       61 lsapgltaas llsqpvvtrp salhvrgavd achcmwghpn lgrchlqilp eyictdpesr
      121 eillrkvhvd lplggcdptc hkhrgpsaql rtsggpcpgg cypgpggggc gprswelssg
      181 qpgpwagwag eqkgdtccgp eglgslrqvs rrpgahaacr vpdsdvgirp plfsplcvln
      241 krmrervdes qkiggnrqaq qprnagclqq evlssgpeda rlfgkteglc geqgpsppsy
      301 n
//
LOCUS       XP_061012050             196 aa            linear   MAM 02-DEC-2023
DEFINITION  basic proline-rich protein-like [Dama dama].
ACCESSION   XP_061012050
VERSION     XP_061012050.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156067.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..196
                     /product="basic proline-rich protein-like"
                     /calculated_mol_wt=20409
     CDS             1..196
                     /gene="LOC133065242"
                     /coded_by="XM_061156067.1:1..591"
                     /db_xref="GeneID:133065242"
ORIGIN      
        1 menttnqlpa lsshqgttsd rrpplrqtgp ppgappargr rergfqdgrr gpaarparpr
       61 rdpcddkplh gprspagqhp vsrrsspaap gpspvapppg ppppaphlds qpgpqpprtr
      121 frkphdyvaa grksrlhgrg gnarhvgtgp srraggapar ptlglgaseg trgsdllqpp
      181 sslsvlflce lspgfc
//
LOCUS       XP_061012051            2110 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 187 [Dama dama].
ACCESSION   XP_061012051
VERSION     XP_061012051.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156068.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2110
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2110
                     /product="coiled-coil domain-containing protein 187"
                     /calculated_mol_wt=223442
     Region          <322..529
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <544..1058
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          1067..>1184
                     /region_name="PspA"
                     /note="Phage shock protein A [Transcription, Signal
                     transduction mechanisms]; COG1842"
                     /db_xref="CDD:441447"
     Region          <1173..1547
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1409..>1798
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..2110
                     /gene="CCDC187"
                     /coded_by="XM_061156068.1:307..6639"
                     /db_xref="GeneID:133065243"
ORIGIN      
        1 maavrwpepp gqagalrgsp ptawsdytee pgrrrqacsv pmwladeeak dgdssvssgr
       61 lsgssgghes ctpphrtwte rapqvprppr qpresnprle qlrdkiraqa qrqascaslg
      121 tstpssashl ykapmpaprr karkppnppp apaypgilsg tesgveekat pgqgretsrv
      181 sqhqasvaqe ktkrmksssc ktekapkppa srraakdtdh skkvgapess pvhpgmpspa
      241 svrsdlqmpa vnvptlasrd ppvnvqaama vlrdlrqqiq aglelarsrh psrglelhsl
      301 agrrqsspwk ppdvqgsfwk speapmdglp tseragslpa arrwspvaew escphrtwaa
      361 pgrdtsfqrc msptkglnsf pqrpwsasar qascppktwa fhgrdpafqr pgspperwvp
      421 ilqrswsasa gqawgpqrar ttsedlaasa srpwsplerp sqptwrpwsa sftqgpsply
      481 qgrgplrtpl gaklawprpi qgafrnapek enevrtprpc pkprgalgpl hsseslrefm
      541 rqktvawrrq aleekasamr slelrnqrlq dahrkqreav lgraipvvsq ttpgivtfvp
      601 hvaqsrdlea aagpgvpvlq wskvtsgmvl gdqeapgsfc lclnralnpt ktlevggpqd
      661 gwegapllmp assslgplkf qdlsthcrsp glciyldpee serlgmpgpl hfrykqarlq
      721 aletmanilk qridvltdkl rrseamdalv gpgpgllpsd astparpaal vpnvgpgapw
      781 dwaglrarpl lsttgfrdme tvhwspgwer pqstsprarh asepigftdn grselegrla
      841 rnvasfqals pfagsslgvp atpdprggsl rleetrsarg aglvapwtlr scgplsdvrq
      901 kslrfleslk pdrreqgqal allrrqaele vwetqkalge llsrprlerl reehstqarp
      961 gaalelerpq vhvdpeprts qsaaaarpss yplpgrdaaa pspspqdgkk swadasahte
     1021 pvqegrpdqp hsqlpparly pweeprfqgs rtrprsaapv pfsrftiqml eqslreedlr
     1081 arhqaallrl rekaleektr aelawlehqr gylnsigsyt alvalaekqq qalshlerel
     1141 rgirhlrtlh lsshrerkll lqqqkdivsv qrsaallqqe lqdrtrlpqs sspevkarre
     1201 egpgtspqqp egpaqgssha rhtpgspfsq hpqrsesppv phqldepqdg tpplaasaad
     1261 ghpqpprlaw dedapaaagr pdaggqppes hghtgqeprg qpgvplpglp ratsldtgwp
     1321 pgpasprppa ggsyrmavsr pplytqagdv egslpaaqiw flpvkepplg dpqtspsprp
     1381 aeektraltg spashfqgqs pslsagrphg pqearqvaeg grspagsepg pdfagspveg
     1441 papveaaqsc sgeqrvetcq qenphtpfsc leaalltlsp gdtpspsrap lsredqspaa
     1501 evaappaphe sgpparltap wdlgsestps acseassprs taassaslps cpslqefqka
     1561 sailvqlses ptslsdgeag vtldtdlswa eglpaldswg fhqgggpetw eglegteals
     1621 ghgsgtgagg lapagglpva qslwsgleqs elssevsgre sprdpgvgar papgrcspvg
     1681 rashleragv plvlppflgp gkgredsgts gsptsgsdtg kaqrrsreta garlpsqtss
     1741 sgdlhltlsf psgtlasefg krgeaalpra sgscpegpwg thpspstdgk plqtssepev
     1801 llmpgappgd pggqvaqtae swapgcrgsr appvleeaci plaggvlpei lspvdealsh
     1861 ssfnlppsiq rdaclpplpp ilpadgeadp aslhsedfpt ppedavcpeg sldtpeeaas
     1921 limaewssls geglsespsp gpqeearlcl gvagqgrsfg eelggsgsvg rdqamdsrls
     1981 elvslgspcc ggagdapgwl pvlsaqpltl sgvacasvgs laagdpglpg sgqgdpapal
     2041 gagphaalpg vetaemvdll saqlssrilr dtlavlseaa pagspaaegp srgmrahtaa
     2101 tgrswgrldf
//
LOCUS       XP_061012052             346 aa            linear   MAM 02-DEC-2023
DEFINITION  spermatogenesis- and oogenesis-specific basic
            helix-loop-helix-containing protein 1 [Dama dama].
ACCESSION   XP_061012052
VERSION     XP_061012052.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156069.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 48% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..346
                     /product="spermatogenesis- and oogenesis-specific basic
                     helix-loop-helix-containing protein 1"
                     /calculated_mol_wt=36153
     Region          57..109
                     /region_name="bHLH_SOHLH1_2"
                     /note="basic helix-loop-helix (bHLH) domain found in the
                     spermatogenesis- and oogenesis-specific basic
                     helix-loop-helix-containing protein (SOHLH) family;
                     cd18908"
                     /db_xref="CDD:381478"
     Site            order(66,68..69,72..73,75..76,79,90..92,94..95,97..98,
                     100..102,104..105)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381478"
     CDS             1..346
                     /gene="SOHLH1"
                     /coded_by="XM_061156069.1:1..1041"
                     /db_xref="GeneID:133065244"
ORIGIN      
        1 masgarepra gvprvsrgcs gpfpsstqfc cedhpsqgsg qtkgppvaeg sgshlprnvl
       61 sererrkris lscerlrall pwfdgrredm asvlemavqf lqlagtlvpg weqqalltss
      121 kepwlawqtd vlqlalasqa pagapdagag tssvmhqtpp scaatgvded ealsgvadvl
      181 drplappesp glvprspgpr ppkvlrpspl wpvrsqqpps plvseeprsc lgqagppaqg
      241 adkaltldsr svsgcdvadg asflltpgpd wwlgslegrg sgapsrvaar sspldrlepg
      301 flgdpesgpq eepldgslgp wgsdgscpsp vlrdevdsif pdffac
//
LOCUS       XP_061012053             266 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: beta-lactoglobulin-2-like [Dama dama].
ACCESSION   XP_061012053
VERSION     XP_061012053.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156070.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 48% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..266
                     /product="LOW QUALITY PROTEIN: beta-lactoglobulin-2-like"
                     /calculated_mol_wt=28307
     Region          21..>141
                     /region_name="lipocalin_FABP"
                     /note="lipocalin/cytosolic fatty acid-binding protein
                     family; cl10502"
                     /db_xref="CDD:471979"
     Site            order(33,37,62,64,72,74,76,87,89,91,100,102,108,110,112,
                     121,123,125,137,139,141)
                     /site_type="other"
                     /note="ligand binding cavity [chemical binding]"
                     /db_xref="CDD:381182"
     CDS             1..266
                     /gene="LOC133065245"
                     /coded_by="XM_061156070.1:1..801"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:133065245"
ORIGIN      
        1 mrclllalgl algcgvqsah ipqtaedldv rkvagtwhvv amaasdvsll daesgllrvy
       61 meelkptpkg dlevllqkre nhkcvektlm aqktkdpavf mvdchaerki svldtdyssy
      121 mifcxggptp tdegsvmcqc lgtwgpcsac leglhltems pqwvpptgnt vvpvtidrrt
      181 dkeavdtavp sagsdlslsk rltpevflvl aasldpeprh ppaprptppp tpvfwglpgt
      241 vqaqrgpscl apdgrrpsiv lvaeap
//
LOCUS       XP_061012054            1665 aa            linear   MAM 02-DEC-2023
DEFINITION  laminin subunit gamma-3 [Dama dama].
ACCESSION   XP_061012054
VERSION     XP_061012054.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156071.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1665
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1665
                     /product="laminin subunit gamma-3"
                     /calculated_mol_wt=179449
     Region          123..357
                     /region_name="Laminin_N"
                     /note="Laminin N-terminal (Domain VI); pfam00055"
                     /db_xref="CDD:459653"
     Region          358..405
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(359,361,371,378,380,389)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          415..471
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(415,417,424,440,443,452)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          470..516
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(471,473,483,489,491,500)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          518..565
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(518,520,529,536,538,547)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          629..761
                     /region_name="Laminin_B"
                     /note="Laminin B (Domain IV); pfam00052"
                     /db_xref="CDD:459652"
     Region          796..843
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(797,799,805,812,814,823)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          844..892
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(845,847,857,864,867,876)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          <912..947
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Region          955..1005
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(956,958,970,977,979,988)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1007..1052
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domai;
                     smart00180"
                     /db_xref="CDD:214543"
     Site            order(1007,1009,1019,1026,1028,1037)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1055..>1092
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(1055,1057,1067,1073,1075,1084)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          <1107..>1654
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..1665
                     /gene="LAMC3"
                     /coded_by="XM_061156071.1:1..4998"
                     /db_xref="GeneID:133065246"
ORIGIN      
        1 mcshngdtga sqgktaggls pqpgtpgrvh qvgvsaqrrs grevgvlpap slppavgpah
       61 rrsrrlggra epgahggaqg rrgcsrtmgt aaalllslal lapraagagm gacydgagrp
      121 qrclpvfena afgrlaeash tcgrppedfc phvgaqgaga pcqrcdaadp arhhnasylt
      181 dfhsqddstw wqspsmafgv qypasvtitl nlgkayeity vrlkfhtsrp esfaiykrsr
      241 aggpwepyqy ysascqktyg rpeglylrpg edervafcts efsdisplsg gnvafstleg
      301 rpsaynfees pvlqewvtst ellisldrln tfgddifkdp kvlqsyyyav sdfsvggrck
      361 cnghasecgp dgegrlacrc qhnttgtdce rclpffqdrp wargtaeaan eclpcncsgh
      421 seecvfdrel frssghggrc lhcrdhtagl hcehcqenfy rwnprtpcqp cdchpagslh
      481 lqcddlgtcv ckptvtgwkc drclpgfhsl seggcractc npagslgtcd prsgrcpcke
      541 nvegslcdrc rpgafnlqph npagcsscfc yghskvcaaa aqfqehhvls dfrqgaegwr
      601 agsmedpghp arwslgglll dpedeevelt apekflgdqr fsygqpltlt frvppggspl
      661 stklrlegag laltlqhsss prtpdsgqag evrlkfllqe tsenvdpplp pfhfqrvlan
      721 ltalriwtsg hstsssspvl ltevrltsar rglsppaswv etcscpqgyt gqfcescapg
      781 ykrdtplggp yascvpctcn qhgtcdpdtg iclcghhteg pscerclpgf ygnpftgqad
      841 dcqpcpcprq sacttipdsr evvcthcpps qrgrrceicd dgffgdplgl sgppqpcqpc
      901 qcsgnmdpna vgncdplsgr clrclhnttg vrcehcqegf ygsalaprpa dkcvpcscsp
      961 egsvseqrpc dpvsgqcscl phvtgrdcgh cspgfydlqp grgcrrctch pwgsredqch
     1021 pktgqcpcrp gvegqtcdrc qlgffgfsvk gcrdcrcspl gatspqchen stcvckpgfm
     1081 gykcercqdn ffltasgtqc qecpscyalv keeaaklkar ltlmegwlqg sdcgrpwgpl
     1141 dilqgeaprg dvhqgphllq gaqeafleqv tglegavkaa reqlqvlgrn ahcaqagaek
     1201 tcvqladlaa alesseeeil haatilaalv ipqerlgqpa swsqlatear vlsrshrdta
     1261 akieatarra llasntsyal lwslvegraa leaqqeledr yqevhaaqka lgtavaealp
     1321 eaervlttvq qvsadaalhl aspaalaspp qksqaeavgl kgqtlektvt srermvteaa
     1381 rslqataqav lqemepltql hqearaaltr asssvqaatv tvtgartlla dlegmkprfp
     1441 rpkdqaalrr kaaivqdril adsrkktkqa ervlgdaasv sskakkkgre aellaqdsak
     1501 lakallragk qehrrasqls rqtratlrla srqllaseah rqeleaaerd gaglsqmerq
     1561 iresrislek dikvlsellt rlgsldthra paralnetqr alerlrlqlg spgalqgklr
     1621 lleqesklqe lqiqsfesdl aeiradkqnl eailhslpgs caswq
//
LOCUS       XP_061012055             438 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C9orf50 homolog [Dama dama].
ACCESSION   XP_061012055
VERSION     XP_061012055.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156072.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..438
                     /product="uncharacterized protein C9orf50 homolog"
                     /calculated_mol_wt=48403
     Region          199..304
                     /region_name="DUF4685"
                     /note="Domain of unknown function (DUF4685); pfam15737"
                     /db_xref="CDD:464834"
     CDS             1..438
                     /gene="C11H9orf50"
                     /coded_by="XM_061156072.1:1..1317"
                     /db_xref="GeneID:133065248"
ORIGIN      
        1 mtrrrpsfwa qqvapeglpg ggdrrrrdpr lprllppelr aasgtrvfgg lrasesgaew
       61 wqapacesly sdpglglrrs rsrlpvlptv aqrparsrtg lrslllppll lageppesap
      121 acpelgered prrgsakets dslgsllgev lpgrfrqflr qfraesaerl lpptpsasqh
      181 qrhptsefng spprcssshf lpdvggrssy lknslkkill hqtpvlgpls rdypqfttvk
      241 anppqathap klkavlthss sgegpgrrrr ccpfrvrfad etlrdtalry werscaarqg
      301 ifenrtakpr stasdrvfgs vgrwleslpk alcsrakeet aaspfswdfp glstlepkgh
      361 lsedtsmnss lpfiprattq rqrgdlktfl eqvgkspcsw sqklesflps vvlhtvlkrg
      421 cpkgyqlllp sashriqr
//
LOCUS       XP_061012056             199 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA repair protein SWI5 homolog, partial [Dama dama].
ACCESSION   XP_061012056
VERSION     XP_061012056.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156073.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         <1..199
                     /product="DNA repair protein SWI5 homolog"
     Region          123..198
                     /region_name="Swi5"
                     /note="pfam07061"
                     /db_xref="CDD:462077"
     CDS             1..199
                     /gene="SWI5"
                     /coded_by="XM_061156073.1:<1..600"
                     /db_xref="GeneID:133065250"
ORIGIN      
        1 agsrgvraql rfvkflvsvt gfqvpgrpee ilfrprsgps isavppqsga pdaraeedst
       61 rtfqklrrgl pipcfreeta flsfvsvtpd ptkglclsss ltspqvrpsp kpgqadrase
      121 eslhldvqkl kekkdmldke itqllsegys vdeledhisq lheyndikdv aqmllgrlav
      181 irgvttkdly pefgldmnd
//
LOCUS       XP_061012057             133 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin-conjugating enzyme E2 variant 1-like [Dama dama].
ACCESSION   XP_061012057
VERSION     XP_061012057.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156074.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 22% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..133
                     /product="ubiquitin-conjugating enzyme E2 variant 1-like"
                     /calculated_mol_wt=15406
     Region          5..>74
                     /region_name="UBCc_UEV"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain/ubiquitin E2 variant (UEV) domain; cl49610"
                     /db_xref="CDD:483950"
     Region          <42..128
                     /region_name="UBCc_UEV"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain/ubiquitin E2 variant (UEV) domain; cl49610"
                     /db_xref="CDD:483950"
     CDS             1..133
                     /gene="LOC133065251"
                     /coded_by="XM_061156074.1:1..402"
                     /db_xref="GeneID:133065251"
ORIGIN      
        1 mlhnkrnlhs rrshrneklk hcseergrpl sdndarwqpp rartiyenri yslkiecgpk
       61 ypeappfvrf vtkinmngvn ssngvvdpra isvlakwqns ysikvvlqel wclmmskenm
      121 klpqppegqc ysn
//
LOCUS       XP_061012058             223 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133065253 [Dama dama].
ACCESSION   XP_061012058
VERSION     XP_061012058.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156075.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..223
                     /product="uncharacterized protein LOC133065253"
                     /calculated_mol_wt=24469
     CDS             1..223
                     /gene="LOC133065253"
                     /coded_by="XM_061156075.1:1..672"
                     /db_xref="GeneID:133065253"
ORIGIN      
        1 mkrslvhlrs rhrssrakpa rakvltdkcl qqhfshspaa prcyppapll ppqasppari
       61 hrthsptqkp essfprqqrl rpeapatgmt dpgipsnpis pvplsalepv rsrlfpstvi
      121 ergsaevaag hypspppppp ryhgtvtrpl mvvqplvcaq qcspptppkt phlrvgwgee
      181 perhlgwvpg clrdenwtgs gdlalkeqtt eiclsrqdlv lrl
//
LOCUS       XP_061012059             320 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 5C1 [Dama dama].
ACCESSION   XP_061012059
VERSION     XP_061012059.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156076.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..320
                     /product="olfactory receptor 5C1"
                     /calculated_mol_wt=35152
     Region          16..307
                     /region_name="7tmA_OR5C1-like"
                     /note="olfactory receptor subfamily 5C1 and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15945"
                     /db_xref="CDD:320611"
     Region          30..56
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320611"
     Region          63..89
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320611"
     Site            order(85,88..89,101..106,108..109,112,157,159..163,199,
                     202..204,206..208,210..211,256,259..260,262..263,266,
                     272..273,275..277,280,283..284)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320611"
     Region          101..131
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320611"
     Region          144..165
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320611"
     Region          199..229
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320611"
     Region          236..266
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320611"
     Region          273..298
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320611"
     CDS             1..320
                     /gene="LOC133065255"
                     /coded_by="XM_061156076.1:1..963"
                     /db_xref="GeneID:133065255"
ORIGIN      
        1 mtpenftwaw gapaefillg itdrwdlrlt lfliflpvyl vsllgnvgmv llihvdaqlh
       61 tpmyfflanl slldacyssa igpkmlvdql lprasipyaa cvlqmflfag ladaecclla
      121 amaydryvai gnpllyttam srrlclvllg asglggavsa vvhttftfrl sfcgsrevns
      181 ffcdipplla iscndtslne lllfavcgfi qtatlsaiav sygfiagavi rmrsaesrwr
      241 aastcgshlt avamlygtli fmylrpsssy aldtdkmasv fytlvipaln pliyslrnke
      301 vkealrrtws rccgprrrhr
//
LOCUS       XP_061012060             327 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1G1-like [Dama dama].
ACCESSION   XP_061012060
VERSION     XP_061012060.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156077.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..327
                     /product="olfactory receptor 1G1-like"
                     /calculated_mol_wt=36672
     Region          44..313
                     /region_name="7tmA_OR1_7-like"
                     /note="olfactory receptor families 1, 7, and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15918"
                     /db_xref="CDD:320584"
     Region          45..71
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320584"
     Region          78..104
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320584"
     Site            order(100,103..104,116..121,123..124,127,172,174..178,214,
                     217..219,221..223,225..226,271,274..275,277..278,281,
                     287..288,290..292,295,298..299)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320584"
     Region          116..146
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320584"
     Region          159..180
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320584"
     Region          214..244
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320584"
     Region          251..281
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320584"
     Region          288..313
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320584"
     CDS             1..327
                     /gene="LOC133065256"
                     /coded_by="XM_061156077.1:1..984"
                     /db_xref="GeneID:133065256"
ORIGIN      
        1 mnpeettanp siwplrqsyq eirnrtsisd flllgfsqhp eqqpllfglf lavylvtmlg
       61 nlliilaiss dphlhtpmyf flanlsftdt cfsctiipkv llniltqhyt ishtgclvqm
      121 fffmelalld dfllavmayd ryvaiclplh yttimgpqrc lllvaaswls shllafslcl
      181 lmsqfsfcas hsiphffcdl lpllklacsd trifqlmmfa eaalsgvvpl tcvlvsyahi
      241 ihtilripsa ggkhkvfstc gshltvvtlf ygtvflvyfq psssysadtg maasvvytmv
      301 tpmlnpfiys lrnrhmkgal wrllvhk
//
LOCUS       XP_061012061             313 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1N2-like [Dama dama].
ACCESSION   XP_061012061
VERSION     XP_061012061.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156078.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..313
                     /product="olfactory receptor 1N2-like"
                     /calculated_mol_wt=34766
     Region          25..294
                     /region_name="7tmA_OR1_7-like"
                     /note="olfactory receptor families 1, 7, and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15918"
                     /db_xref="CDD:320584"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320584"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320584"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,252,255..256,258..259,262,
                     268..269,271..273,276,279..280)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320584"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320584"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320584"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320584"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320584"
     Region          269..294
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320584"
     CDS             1..313
                     /gene="LOC133065257"
                     /coded_by="XM_061156078.1:1..942"
                     /db_xref="GeneID:133065257"
ORIGIN      
        1 mgvanqtsis dflllgfsqh peqqpllfgl flavylvtml gnlliilais sdphlhtpmy
       61 fflanlsftd tcfsctiipk vllniltqhy tishtgclvq mfffmelall ddfllavmay
      121 dryvaiclpl hyttimgpqr clllvaaswl sshllafslc llmsqlsfca shaiphffcd
      181 llpllklacs dthifqvtml teavpsglip ltcvvvsyah iiltvlrips pggkhkvfst
      241 cgshltvvtl fygtlflvyf qpsssysadp gmaasvvytm vtpmlnpfiy slrnrhmkea
      301 lyrffgwgkc stq
//
LOCUS       XP_061012062             329 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1361-like, partial [Dama dama].
ACCESSION   XP_061012062
VERSION     XP_061012062.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156079.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..>329
                     /product="olfactory receptor 1361-like"
     Region          43..312
                     /region_name="7tmA_OR1_7-like"
                     /note="olfactory receptor families 1, 7, and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15918"
                     /db_xref="CDD:320584"
     Region          44..70
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320584"
     Region          77..103
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320584"
     Site            order(99,102..103,115..120,122..123,126,171,173..177,213,
                     216..218,220..222,224..225,270,273..274,276..277,280,
                     286..287,289..291,294,297..298)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320584"
     Region          115..145
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320584"
     Region          158..179
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320584"
     Region          213..243
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320584"
     Region          250..280
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320584"
     Region          287..312
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320584"
     CDS             1..329
                     /gene="LOC133065258"
                     /coded_by="XM_061156079.1:1..>987"
                     /db_xref="GeneID:133065258"
ORIGIN      
        1 mnpeetatnt irilqpsyqe irnqtsisdf lllgfsqhpe qqpllfwlfl avylvtmlgn
       61 lliilaissd prlhtpmyff lanlsltdtc fsctiipkvl lniltqhyti shtgclvqmf
      121 ffmeltlldd fllalmaydr yvaiclplhy ttimgpqrcl llvaiswlss hllafclcll
      181 msqlsfcash aiphffcdvp pllklacsdt rifqvtmlte avpsgliplt cvvvsyahii
      241 ltvlripspg gkhkvfstcg shltvvtlfy gtlflvyfqp sssysadtgm aasvvytmvt
      301 pmlnpfiysl rnrhmkealc rfftlslhl
//
LOCUS       XP_061012063             312 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1L4-like [Dama dama].
ACCESSION   XP_061012063
VERSION     XP_061012063.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156080.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..312
                     /product="olfactory receptor 1L4-like"
                     /calculated_mol_wt=35296
     Region          23..300
                     /region_name="7tmA_OR1A-like"
                     /note="olfactory receptor subfamily 1A and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15235"
                     /db_xref="CDD:320363"
     Region          25..51
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320363"
     Region          58..84
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320363"
     Site            order(80,83..84,96..101,103..104,107,152,154..158,194,
                     197..199,201..203,205..206,251,254..255,257..258,261,
                     267..268,270..272,275,278..279)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320363"
     Region          96..126
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320363"
     Region          139..160
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320363"
     Region          194..224
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320363"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320363"
     Region          268..293
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320363"
     CDS             1..312
                     /gene="LOC133065260"
                     /coded_by="XM_061156080.1:1..939"
                     /db_xref="GeneID:133065260"
ORIGIN      
        1 mrgnqshite flllgltsdl kqqvwlfasf lamylvnvgg nsviiaaiqg dvrlhtpmyf
       61 flsnlsfvdi cftnvivprm lanmqskskk vpfiqcltqm yffvacaitd sfllaamald
      121 ryvaichplh ytttmnprrc lqlvtaswlv shlhslthtv lmarlsfcgp niihhffcdv
      181 qpllmlscsd tsvnellaft egsfvimspf ifiivsyvyi travlrvpsg rgrykvfstc
      241 gshltvvaly ygtaisvyir psstysvtkn rvvtviytvv ipmlnpfiys lrnrdmkqal
      301 rklarreeqn kh
//
LOCUS       XP_061012064             313 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1L4-like [Dama dama].
ACCESSION   XP_061012064
VERSION     XP_061012064.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156081.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..313
                     /product="olfactory receptor 1L4-like"
                     /calculated_mol_wt=35381
     Region          24..301
                     /region_name="7tmA_OR1A-like"
                     /note="olfactory receptor subfamily 1A and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15235"
                     /db_xref="CDD:320363"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320363"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320363"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,252,255..256,258..259,262,
                     268..269,271..273,276,279..280)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320363"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320363"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320363"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320363"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320363"
     Region          269..294
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320363"
     CDS             1..313
                     /gene="LOC133065261"
                     /coded_by="XM_061156081.1:1..942"
                     /db_xref="GeneID:133065261"
ORIGIN      
        1 mtrgnqshit eflllgltsd pkqqvwlfas flamylvnvg gnsviiaaiq gdvrlhtpmy
       61 fflsnlsfvd icftnvivpr mlanmqsksk kvpfiqcltq myffvacait dsfllaamal
      121 dryvaichpl hytttmnprr clqlvtaswl vshlhsltht vlmarlsfcg pniihhffcd
      181 vqpllmlscs dtsvnellaf tegsfvimsp fifiivsyvy itravlrvps grgrykvfst
      241 cgshltvval yygtaisvyi rpsstysvtk nrvvtviytv vipmlnpfiy slrnrdmkqa
      301 lrklarreeq nkh
//
LOCUS       XP_061012065             325 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1L3-like [Dama dama].
ACCESSION   XP_061012065
VERSION     XP_061012065.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156082.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..325
                     /product="olfactory receptor 1L3-like"
                     /calculated_mol_wt=36433
     Region          24..300
                     /region_name="7tmA_OR1A-like"
                     /note="olfactory receptor subfamily 1A and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15235"
                     /db_xref="CDD:320363"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320363"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320363"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,252,255..256,258..259,262,268,
                     270..272,275,278..279)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320363"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320363"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320363"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320363"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320363"
     Region          269..293
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320363"
     CDS             1..325
                     /gene="LOC133065264"
                     /coded_by="XM_061156082.1:1..978"
                     /db_xref="GeneID:133065264"
ORIGIN      
        1 mgmsnltrlp efillglssh pedqkplfal fliiylvtlm gnlliilvih sdsqlqnpmy
       61 fflsilsfad ichttvivpk mlvnflsetk aisyaeclvq myfflvfgnm dsyllaamai
      121 dryvaicnpf yyvtvmnhgc cmlllafsta fsylhsllhv llvnrltfca snvihhffcd
      181 vnpvlklacs stsvnevvam teglvsvmap fvciiisylk iliailkips aagkrkafst
      241 csshltvvtl fygsiccvyf qplssytvkd rivtvnytil tpmlnpfiys lrnkdmkqgl
      301 eklisrtkfq mnrlsstnsn rirga
//
LOCUS       XP_061012066             317 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1L1-like [Dama dama].
ACCESSION   XP_061012066
VERSION     XP_061012066.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156083.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..317
                     /product="olfactory receptor 1L1-like"
                     /calculated_mol_wt=35845
     Region          31..307
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          34..58
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320363"
     Region          67..89
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320363"
     Region          105..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320363"
     Region          150..166
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320363"
     Region          203..226
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320363"
     Region          245..267
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320363"
     Region          276..300
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320363"
     CDS             1..317
                     /gene="LOC133065265"
                     /coded_by="XM_061156083.1:1..954"
                     /db_xref="GeneID:133065265"
ORIGIN      
        1 miskikttrw dnisspsefi llglssrped qkplfvlfvt iylvtlmgnl iiilaiysdi
       61 hlqtpmyffl kslsfvdicy ttviipkmli nflseaktil ysecmtqtyf clsfgnvdsy
      121 vlgamaidry vaickpfhyi timsykccvl lliisltipf lhsllhvhll nqltfcasni
      181 ihhffcelka mlklscssty vneivikteg lsvvmapfmc viisylrilt tvlkipstag
      241 kykafstcgs hltvvslfyg sisyvylqpl nsytvkdria tviytmltsm lnpfiyslrn
      301 kdlkqglgkl igriksq
//
LOCUS       XP_061012067             330 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1361-like [Dama dama].
ACCESSION   XP_061012067
VERSION     XP_061012067.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156084.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..330
                     /product="olfactory receptor 1361-like"
                     /calculated_mol_wt=36599
     Region          24..300
                     /region_name="7tmA_OR1A-like"
                     /note="olfactory receptor subfamily 1A and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15235"
                     /db_xref="CDD:320363"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320363"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320363"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,194,
                     197..199,201..203,205..206,251,254..255,257..258,261,
                     267..268,270..272,275,278..279)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320363"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320363"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320363"
     Region          194..224
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320363"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320363"
     Region          268..293
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320363"
     CDS             1..330
                     /gene="LOC133065266"
                     /coded_by="XM_061156084.1:1..993"
                     /db_xref="GeneID:133065266"
ORIGIN      
        1 matrnrtevt efvllglssw pemqpvifgi vlpmylvavm gnallmiaal sdpklqtpmy
       61 fllsqlsfid islttitvpq mlthtlsvnr tisfnccmlq lfffmavgsm eghllaamay
      121 dryvaicdpl rysaiishrl clritltswv vvslnsllys vlvtrltfcg nqvthffcdi
      181 tpllklsctr pvvsemlift egvavvvspf ffilgsyvri gvaiahmhsv aalrkalstc
      241 sshilvvlll ygsvicvylr psssydldqe rqvaifytvv tpmlnpliys lrnqevkgal
      301 rrlfrklsqa tsnlvpgqtg ngstapepfr
//
LOCUS       XP_061012068             481 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1J4-like [Dama dama].
ACCESSION   XP_061012068
VERSION     XP_061012068.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156085.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..481
                     /product="olfactory receptor 1J4-like"
                     /calculated_mol_wt=53913
     Region          32..>151
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          32..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          61..83
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          99..121
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          193..468
                     /region_name="7tmA_OR1E-like"
                     /note="olfactory receptor subfamily 1E and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15236"
                     /db_xref="CDD:320364"
     Region          193..219
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320364"
     Region          226..252
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320364"
     Site            order(248,251..252,264..269,271..272,275,320,322..326,362,
                     365..367,369..371,373..374,419,422..423,425..426,429,
                     435..436,438..440,443,446..447)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320364"
     Region          264..294
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320364"
     Region          307..328
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320364"
     Region          362..392
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320364"
     Region          399..429
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320364"
     Region          436..461
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320364"
     CDS             1..481
                     /gene="LOC133065267"
                     /coded_by="XM_061156085.1:1..1446"
                     /db_xref="GeneID:133065267"
ORIGIN      
        1 mkpgnhtfsv seflllglse hqeqqpllfg iflsmylitv vgnvaislai vsdphlhtpm
       61 yfflahfslt dlglssttvp rmlvniqahr htityagclc qiyfflwfig ldvfllavma
      121 ydrlvaichp lhytlvmspr ccillvvmsl ilaqayslth tllltrlmer enqssvsefl
      181 llgfpiqpeq rdmvfalflg vylttvlgnl liillirldp rlhtpmyffl shlaltdvsf
      241 ssvtlpkmlm nmqtrcqait yagcisqvyf fiffgcldsf llaimaydrh mavchplryt
      301 aimrdefcvi laagcwlaac aqallhtllv dqltfcagtv iphffcdlav vlkascsdts
      361 lnellilteg gliftlplgg ilasyihmaa iilkvpsftr ifkalstcgs hlfvvflyyg
      421 tiagvyyfps sgnskvkdiv aslmymvvtp mlnpfiyslr nkdmkhalqk ffrtmgtpgy
      481 r
//
LOCUS       XP_061012069             346 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: olfactory receptor 1J4-like [Dama dama].
ACCESSION   XP_061012069
VERSION     XP_061012069.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156086.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 9% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..346
                     /product="LOW QUALITY PROTEIN: olfactory receptor
                     1J4-like"
                     /calculated_mol_wt=38227
     Region          59..327
                     /region_name="7tmA_OR1_7-like"
                     /note="olfactory receptor families 1, 7, and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15918"
                     /db_xref="CDD:320584"
     Region          59..85
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320584"
     Region          92..118
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320584"
     Site            order(114,117..118,130..135,137..138,141,186,188..192,228,
                     231..233,235..237,239..240,285,288..289,291..292,295,
                     301..302,304..306,309,312..313)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320584"
     Region          130..160
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320584"
     Region          173..194
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320584"
     Region          228..258
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320584"
     Region          265..295
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320584"
     Region          302..327
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320584"
     CDS             1..346
                     /gene="LOC133065268"
                     /coded_by="XM_061156086.1:1..1041"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /db_xref="GeneID:133065268"
ORIGIN      
        1 mkqiylkgnk lrrlldlgen giltsqaltq arsvkrenqs smseflllgl piwpeqqgvf
       61 falflgmylt tvlgnllivl lirldarlht smyfflshla ltdvsfssvt vpkmlinmqt
      121 qdqsipyagc itqmyfflff tglddfllts maydqymaic hplhystimg qglctllvtv
      181 swilscanal chtllltqls fcadhsiphf fcdlgallkl scsdtslnel aiftagvaii
      241 ilplvcilis ygcfgatilk vpstkgicka lstcgshlsv vslyygtiig lyvfpsssts
      301 rdkitiasvm ytvvtpllnp fiyslrnrdm tgalerllhr akvlsq
//
LOCUS       XP_061012070             311 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1J21-like [Dama dama].
ACCESSION   XP_061012070
VERSION     XP_061012070.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156087.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..311
                     /product="olfactory receptor 1J21-like"
                     /calculated_mol_wt=34519
     Region          26..294
                     /region_name="7tmA_OR1_7-like"
                     /note="olfactory receptor families 1, 7, and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15918"
                     /db_xref="CDD:320584"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320584"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320584"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,252,255..256,258..259,262,
                     268..269,271..273,276,279..280)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320584"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320584"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320584"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320584"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320584"
     Region          269..294
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320584"
     CDS             1..311
                     /gene="LOC133065269"
                     /coded_by="XM_061156087.1:1..936"
                     /db_xref="GeneID:133065269"
ORIGIN      
        1 mgrenqshls eflllglpir peqqgvffal flgmylttvl snllillvir ldphlhtpiy
       61 fflchlaftd itfssvttpk mlmnmqtqsq sisyagcisq vyfflmlgcl dsflltsmay
      121 dryvaichpl hyitimsqsl cfllvivswi lssvsailht lllarlsfcg dnllphffcd
      181 latllklsts dttvnelfil tvgvvvitlp facilvsygc igatilrvps tkglykalst
      241 cgshlsvval yygtiiglyf fplsnysndk dvimailytl itpmlnpfiy slrnkdmkga
      301 lgnilsrgtf s
//
LOCUS       XP_061012071             313 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1J4-like [Dama dama].
ACCESSION   XP_061012071
VERSION     XP_061012071.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156088.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..313
                     /product="olfactory receptor 1J4-like"
                     /calculated_mol_wt=34905
     Region          27..294
                     /region_name="7tmA_OR1_7-like"
                     /note="olfactory receptor families 1, 7, and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15918"
                     /db_xref="CDD:320584"
     Region          27..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320584"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320584"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,252,255..256,258..259,262,
                     268..269,271..273,276,279..280)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320584"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320584"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320584"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320584"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320584"
     Region          269..294
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320584"
     CDS             1..313
                     /gene="LOC133065271"
                     /coded_by="XM_061156088.1:1..942"
                     /db_xref="GeneID:133065271"
ORIGIN      
        1 mrrenqssvs eflllglpiw peqqgaffal flgmylttvl gnlliillir ldphlhtpmy
       61 fflshlaltd isfssvtvpk mlinmhtrdq sipyagcvtq myffiffgcv dnlllavmay
      121 dryvaichpl hytiimrgnl cislvavswi fscssamsht lslvrlsfca dntiphffcd
      181 laallklscs dtslnelvif tvgalgiiip ltgilvsyvp igasilrvps tkgiykalst
      241 cgshlsvvfl fygtimvlyi fppsnnsndk diiasvmytv vtpmlnpfiy slrnrdmkga
      301 lgrlsrweif fsk
//
LOCUS       XP_061012072             312 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1J4-like [Dama dama].
ACCESSION   XP_061012072
VERSION     XP_061012072.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156089.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..312
                     /product="olfactory receptor 1J4-like"
                     /calculated_mol_wt=35327
     Region          25..301
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          27..51
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320364"
     Region          60..82
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320364"
     Region          98..120
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320364"
     Region          143..159
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320364"
     Region          196..219
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320364"
     Region          238..260
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320364"
     Region          269..294
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320364"
     CDS             1..312
                     /gene="LOC133065272"
                     /coded_by="XM_061156089.1:1..939"
                     /db_xref="GeneID:133065272"
ORIGIN      
        1 mkrenqssms eflllglpil peqqgiffal flgmylttvl gnllilllik ldprlhtpmy
       61 fflshlaftd vsfssvtipg mliniytqqk sipyvecisq myffilfgcl dnfllavmay
      121 drymamcqpl hyttvmrqel cislvavswf fccihallht lllvqlsfca entipnffcd
      181 lpallkmscs disinelvif teggmlfilp lssilgsyvr igtivlrvps tkrlfkafst
      241 cgshlfvvsl yygtlagvyf fsslwdsndk yiiasviyav vtpmlnpfvy slrngdikqa
      301 leiflnranf lk
//
LOCUS       XP_061012073             310 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1L8-like [Dama dama].
ACCESSION   XP_061012073
VERSION     XP_061012073.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156090.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..310
                     /product="olfactory receptor 1L8-like"
                     /calculated_mol_wt=35097
     Region          25..301
                     /region_name="7tmA_OR1A-like"
                     /note="olfactory receptor subfamily 1A and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15235"
                     /db_xref="CDD:320363"
     Region          27..53
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320363"
     Region          60..86
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320363"
     Site            order(82,85..86,98..103,105..106,109,154,156..160,196,
                     199..201,203..205,207..208,253,256..257,259..260,263,269,
                     271..273,276,279..280)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320363"
     Region          98..128
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320363"
     Region          141..162
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320363"
     Region          196..226
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320363"
     Region          233..263
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320363"
     Region          270..294
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320363"
     CDS             1..310
                     /gene="LOC133065275"
                     /coded_by="XM_061156090.1:1..933"
                     /db_xref="GeneID:133065275"
ORIGIN      
        1 merlnqtssv sefillglss rpedqkplfi lfliiylvti tgnvliilai hsdpqlhtpm
       61 yfflsvlsfi dicfsttiip rmlvnflsek ktisyagclt qmyftyvlgn tdsyllaama
      121 ydryvaicdp fhyvtimsch tcvllvafsc slphfhtllh illlnqltfc nskvvhhflc
      181 dinpllklsc ssifvndlii kteglvfwvt pflcivfsya rilvavlrip saagkrkafs
      241 tcgshftvvi lfygsifyvy lqplssytvr drvatlvytv lssmlnpfiy slrnkdmkrg
      301 lgkmtgrrks
//
LOCUS       XP_061012074             314 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1L8-like [Dama dama].
ACCESSION   XP_061012074
VERSION     XP_061012074.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156091.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..314
                     /product="olfactory receptor 1L8-like"
                     /calculated_mol_wt=35519
     Region          25..300
                     /region_name="7tmA_OR1A-like"
                     /note="olfactory receptor subfamily 1A and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15235"
                     /db_xref="CDD:320363"
     Region          27..53
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320363"
     Region          60..86
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320363"
     Site            order(82,85..86,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,252,255..256,258..259,262,268,
                     270..272,275,278..279)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320363"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320363"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320363"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320363"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320363"
     Region          269..293
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320363"
     CDS             1..314
                     /gene="LOC133065276"
                     /coded_by="XM_061156091.1:1..945"
                     /db_xref="GeneID:133065276"
ORIGIN      
        1 merlnqtssv sefillglss rpedqkplfi lfliiylvti tgnlliilai hsdpqlhtpm
       61 yfflsvlsft dicftttivp rmlvnflshk tisyagcltq myflyalgnt dswllvvmaf
      121 dryvaicdpf hyvttmshcr cillvafscs lphfhsllht lllnqltfcd sniihhflcd
      181 lsplmklscs ptfvneivlm teasaflvtp flciafsyir ilitvlkips tsgkrkafst
      241 cgshltvvtl fygsifyvyl qpvstytvrd hvativytvl ssmlnpfiys lrnkdlnqgl
      301 rkllgrrkpq ttps
//
LOCUS       XP_061012075             309 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1L8-like [Dama dama].
ACCESSION   XP_061012075
VERSION     XP_061012075.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156092.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..309
                     /product="olfactory receptor 1L8-like"
                     /calculated_mol_wt=34905
     Region          25..300
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          28..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320363"
     Region          61..83
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320363"
     Region          98..120
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320363"
     Region          143..159
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320363"
     Region          196..219
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320363"
     Region          238..260
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320363"
     Region          269..293
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320363"
     CDS             1..309
                     /gene="LOC133065278"
                     /coded_by="XM_061156092.1:1..930"
                     /db_xref="GeneID:133065278"
ORIGIN      
        1 merlnqtssv sefillglss qpedqkplfi lfliiylvti tgnlliilai hsdsqlhtpm
       61 yfflsclsfi dicftttivp rmlvnflshk tisyagcltq myfiyalgnt dswllvvmaf
      121 dryvaicdpf hyvttmshcr cvllvtfscs lphlhsllht lllnqvtfcd sniihhflcd
      181 fsplvklscs stfineivmm iegsvflvtp flcitfsyiq illavlkips aagkckafst
      241 cgshltvvtl fygsifyvyl qpvstytvrd hmativytvl tstlnpfiys lrntdlkqgl
      301 rklvvrrkp
//
LOCUS       XP_061012076             314 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1L8-like [Dama dama].
ACCESSION   XP_061012076
VERSION     XP_061012076.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156093.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..314
                     /product="olfactory receptor 1L8-like"
                     /calculated_mol_wt=35273
     Region          25..300
                     /region_name="7tmA_OR1A-like"
                     /note="olfactory receptor subfamily 1A and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15235"
                     /db_xref="CDD:320363"
     Region          27..53
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320363"
     Region          60..86
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320363"
     Site            order(82,85..86,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,252,255..256,258..259,262,268,
                     270..272,275,278..279)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320363"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320363"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320363"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320363"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320363"
     Region          269..293
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320363"
     CDS             1..314
                     /gene="LOC133065279"
                     /coded_by="XM_061156093.1:1..945"
                     /db_xref="GeneID:133065279"
ORIGIN      
        1 merlnqtssv sefillglss rpedqkplfi lfliiylvti tgnlliilai csdpqlhtpm
       61 yfflsvlsft dvcftttivp rmlvnflshk tisyagcltq myfiyalgnt dscllatmay
      121 dhyvaicdpf hyvttmshrc cvllvafscs lphfhsllhv lllnqltfcd snvihhflcd
      181 isplmklscs ptfvneivim tegpvllvtp flfitfsyir iliavlkiss tsgkrkafst
      241 cgshltvvtl fygsifyvyl qpvstytvrd hvativytvl sstlnpfiys lrnkdlnqgl
      301 rkllgrrkpq aapp
//
LOCUS       XP_061012077             314 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1L8-like [Dama dama].
ACCESSION   XP_061012077
VERSION     XP_061012077.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156094.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..314
                     /product="olfactory receptor 1L8-like"
                     /calculated_mol_wt=35305
     Region          25..300
                     /region_name="7tmA_OR1A-like"
                     /note="olfactory receptor subfamily 1A and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15235"
                     /db_xref="CDD:320363"
     Region          27..53
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320363"
     Region          60..86
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320363"
     Site            order(82,85..86,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,252,255..256,258..259,262,268,
                     270..272,275,278..279)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320363"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320363"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320363"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320363"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320363"
     Region          269..293
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320363"
     CDS             1..314
                     /gene="LOC133065280"
                     /coded_by="XM_061156094.1:1..945"
                     /db_xref="GeneID:133065280"
ORIGIN      
        1 merlnqtssv sefillglss rpedqkplfi lfliiylvti tgnlliilai hsdpqlhtpm
       61 yfflsvlsft dvcftttivp rmlvnflshk tisyagcltq myfiyalgnt dscllavmaf
      121 dryvaicdpf hyvttmshrc cvllvafscs lphfhsllht lllnqltfcd snvihnflcd
      181 lspliklscs ptfvneivil iegsfilvtp flcitfsyiq ilvavlkips tsgkrkafst
      241 cgshltvvtl fygsifyvyl qpvstytvrd hvativytvl ssmlnpfiys lrnkdlnqgl
      301 rkllgrrkpq ttps
//
LOCUS       XP_061012078             310 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1L3-like [Dama dama].
ACCESSION   XP_061012078
VERSION     XP_061012078.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156095.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..310
                     /product="olfactory receptor 1L3-like"
                     /calculated_mol_wt=35117
     Region          25..301
                     /region_name="7tmA_OR1A-like"
                     /note="olfactory receptor subfamily 1A and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15235"
                     /db_xref="CDD:320363"
     Region          27..53
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320363"
     Region          60..86
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320363"
     Site            order(82,85..86,98..103,105..106,109,154,156..160,196,
                     199..201,203..205,207..208,253,256..257,259..260,263,269,
                     271..273,276,279..280)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320363"
     Region          98..128
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320363"
     Region          141..162
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320363"
     Region          196..226
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320363"
     Region          233..263
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320363"
     Region          270..294
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320363"
     CDS             1..310
                     /gene="LOC133065282"
                     /coded_by="XM_061156095.1:1..933"
                     /db_xref="GeneID:133065282"
ORIGIN      
        1 mervnqtssv sefillglss rpedqkplfa lffimyivti agnvliilai rsdtqlqtpm
       61 yfflsilsfi dvcytttivp kmlvnflskk ksisyaecmt qmyfflafan tesyllaama
      121 idryvaicdp fhyvttmsrr ccallvtfsc sishlhslll vllinrllfc dsniihhflc
      181 dinpllklsc sstlvneivi nteglitlvs pficviisyl rifiavlkip saagkhkafs
      241 tcgshvtmvt lfygsiiyvy frplstytik drvatviytv lssmlnpfiy slrnkdmkrg
      301 lrklmsrrms
//
LOCUS       XP_061012079             475 aa            linear   MAM 02-DEC-2023
DEFINITION  N-acetyllactosaminide alpha-1,3-galactosyltransferase-like 1 [Dama
            dama].
ACCESSION   XP_061012079
VERSION     XP_061012079.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156096.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 41% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..475
                     /product="N-acetyllactosaminide
                     alpha-1,3-galactosyltransferase-like 1"
                     /calculated_mol_wt=54091
     Region          32..302
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
     Site            order(72,74,105,164,166)
                     /site_type="active"
                     /db_xref="CDD:132997"
     CDS             1..475
                     /gene="LOC133065284"
                     /coded_by="XM_061156096.1:1..1428"
                     /db_xref="GeneID:133065284"
ORIGIN      
        1 msrlllhdfh fvprdqetge pqlsdwfnpk krpdvitttn wlapviwegt ynrpvlqkyy
       61 krlnitigla vicvprkfsn qsltdfiqsa nkhflfgysv vfyflldifs tlppialgpl
      121 rtfkvflmvk sdtgkdfyfi ymnnffdyii thiqyevnfl fvmnadqvfk ddfgvetlgk
      181 svaqlsawwy fkdgdtfpye rrlksaafip feegdfyyhs aifggtveev lnlireyqkg
      241 aiqdiknqls styehhlnky lfikkptkll speynwdpsf rtppqikcvk iawqsknqdl
      301 pgkvhlgpag sinrikqepw gcqagtvnqk gtlqalepkp kkedpkvkdt hkqvnvspkt
      361 qdsvvsakeg kkkpkaepli qsgadgdvfk aqtpnqetqg alevreapdv hvevpveegw
      421 afggaakgks teqmpswvlr nlcgkkggfr lcpyecqevt glhelfaawk dcdag
//
LOCUS       XP_061012080             483 aa            linear   MAM 02-DEC-2023
DEFINITION  matrilin-3 [Dama dama].
ACCESSION   XP_061012080
VERSION     XP_061012080.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156097.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..483
                     /product="matrilin-3"
                     /calculated_mol_wt=52219
     Region          77..300
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Site            order(86,157,193)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238119"
     Region          307..343
                     /region_name="FXa_inhibition"
                     /note="Coagulation Factor Xa inhibitory site; pfam14670"
                     /db_xref="CDD:464251"
     Region          349..385
                     /region_name="FXa_inhibition"
                     /note="Coagulation Factor Xa inhibitory site; pfam14670"
                     /db_xref="CDD:464251"
     Region          391..427
                     /region_name="FXa_inhibition"
                     /note="Coagulation Factor Xa inhibitory site; pfam14670"
                     /db_xref="CDD:464251"
     Region          438..480
                     /region_name="Matrilin_ccoil"
                     /note="Trimeric coiled-coil oligomerization domain of
                     matrilin; pfam10393"
                     /db_xref="CDD:463070"
     CDS             1..483
                     /gene="MATN3"
                     /coded_by="XM_061156097.1:1..1452"
                     /db_xref="GeneID:133065290"
ORIGIN      
        1 mprhlpglll llwpllllpp ppaapspmar pglrrlgtrg pggspgrrpa paapasvpys
       61 gagqpggarg agvcksrpld lvfiidssrs vrpleftkvk tfvskiidtl digpadtrva
      121 vvnyastvki efhlqthsdk qslkravari tplstgtmsg laiqtamdea ftveagargp
      181 ssnipkvaii vtdgrpqdqv nevaararas gielyavgvd radmeslkmm asepldehvf
      241 yvetygviek lssrfqetfc aldlcalgth qcqhvcisdg dgrhhcecsq gyslnadkkt
      301 csaidkcaln thgcehicvn drtgsyhcec yegytlnedr ktcsaqdqca lgthgcqhic
      361 vndragshhc ecyegyalne dkktcsvlnq calgshgcqh icvydgnasy hcdcdtgytl
      421 nedkktcsai eearrliste dacaceatla fqdkvnsylq rlnsklddil eklqaneygq
      481 vhr
//
LOCUS       XP_061012081             486 aa            linear   MAM 02-DEC-2023
DEFINITION  b(0,+)-type amino acid transporter 1-like [Dama dama].
ACCESSION   XP_061012081
VERSION     XP_061012081.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156098.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..486
                     /product="b(0,+)-type amino acid transporter 1-like"
                     /calculated_mol_wt=52676
     Region          2..478
                     /region_name="2A0308"
                     /note="L-type amino acid transporter; TIGR00911"
                     /db_xref="CDD:273332"
     CDS             1..486
                     /gene="LOC133065291"
                     /coded_by="XM_061156098.1:1..1461"
                     /db_xref="GeneID:133065291"
ORIGIN      
        1 mkrsqqgdgd egvaeqeagd eglrlrrdmg lwsavsltag smigsgifma pqgvlvymgs
       61 pgaslvvwav cgllatlgal cyaelgtlvp esggeytyil rtfgslpafl viymfvlvgr
      121 patiaaisls faeyvlvpfy pgcsslpqam lkvvaatcil llmlvncwss rmtamlmnvc
      181 tttqvlsllv ivgggavvlg qgrgrteall safhntsqqa ghismafyqc lwsfdgwnsl
      241 nqvteelkns nqnlvwalmi tiplvtglym lanvsyllvl spseilstda mavswgnqvl
      301 gawawlvpla valssfgsan gsffsgsrvs yvaareghlp qllsmvhvhr ltptpalmft
      361 tamalilvis gnfntivnfl sflgwltygi tfscllylri kknlprpykv piiipatmvl
      421 asvylvlapi mahpqpefly vflfllsgfp vyflfvyfry qpkclqvvtl hlqllmeaap
      481 tmknad
//
LOCUS       XP_061012082            2315 aa            linear   MAM 02-DEC-2023
DEFINITION  tudor domain-containing protein 15 [Dama dama].
ACCESSION   XP_061012082
VERSION     XP_061012082.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156099.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 16% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2315
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2315
                     /product="tudor domain-containing protein 15"
                     /calculated_mol_wt=263806
     Region          14..160
                     /region_name="Tudor_TDRD15_rpt1"
                     /note="first Tudor domain found in Tudor domain-containing
                     protein 15 (TDRD15) and similar proteins; cd20436"
                     /db_xref="CDD:410507"
     Site            order(70,77,93,96,98)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410507"
     Region          239..358
                     /region_name="Tudor_TDRD15_rpt2"
                     /note="second Tudor domain found in Tudor
                     domain-containing protein 15 (TDRD15) and similar
                     proteins; cd20437"
                     /db_xref="CDD:410508"
     Site            order(300,306,323,326,328)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410508"
     Region          478..618
                     /region_name="Tudor_SF"
                     /note="Tudor domain superfamily; cl02573"
                     /db_xref="CDD:470623"
     Site            order(542,547,549,565,568,570)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410509"
     Region          747..871
                     /region_name="Tudor_SF"
                     /note="Tudor domain superfamily; cl02573"
                     /db_xref="CDD:470623"
     Site            order(811,816,818,835,838,840)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410510"
     Region          959..1085
                     /region_name="Tudor_SF"
                     /note="Tudor domain superfamily; cl02573"
                     /db_xref="CDD:470623"
     Site            order(1025,1030,1032,1049,1052,1054)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410511"
     Region          1310..1418
                     /region_name="Tudor_SF"
                     /note="Tudor domain superfamily; cl02573"
                     /db_xref="CDD:470623"
     Site            order(1358,1363,1365,1382,1385,1387)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410512"
     Region          1533..1685
                     /region_name="Tudor_SF"
                     /note="Tudor domain superfamily; cl02573"
                     /db_xref="CDD:470623"
     Site            order(1592,1597,1599,1615,1618,1620)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410513"
     Region          1749..1861
                     /region_name="TUDOR"
                     /note="Tudor domain; pfam00567"
                     /db_xref="CDD:425754"
     CDS             1..2315
                     /gene="TDRD15"
                     /coded_by="XM_061156099.1:1..6948"
                     /db_xref="GeneID:133065292"
ORIGIN      
        1 mdstsllpal lnvdltishi eclpkdilvk fqgrnniece fdyhilqrei qyvqkgnnnv
       61 diddfclvee rvsgewqrgr vvekknelyt vllidhgeel rvdstqvasa cgnlfelppr
      121 vtfgilanil pagkkwspka lnyfkslvgl qvkgcvqavl plqmivlevp niisqvlelq
      181 lgrlidgdsf rlivemvkef pkqmpdslhr krpesslsnn dtlldiqhvl dnlqpslsvg
      241 stesvkvssa lspskfycql ikwipelenf ttcmtlhydi isqgssptcd nfgllcvarr
      301 ingqwhrgil qqllpnnqvr iwfmdygsse tvpsvhvkkl kqdfvlvplf sfpcsltclh
      361 spdrdirkfq lsifkqallg qvvyahldrf nkdehlyyvt letqestvts kcllktvgtq
      421 vlcpvsdski ynrlratsas evnsfavgsf ianteqpids lskkdtlkid fpvktvemki
      481 eaayigfvvy vlnpsnfwvr tnehqnefqd iikninkyyd lceneelilr npepgsfcca
      541 ryskdrhfyr avvteingyk invyfldygn tdsipffdvk illpefcelp alamccslah
      601 vfpvedlwvk aavdyfkkiv lnkavllqvi akkddkytvn iqsieasedn dvvslmlqag
      661 yaeywevepk ccpkfvseys vlnlkskskv nvkkvisall egpqskryhp nklkesnlsl
      721 lksqpvnfse fenpfilsvg pespwrykey vfkpgtvlev kcsyscgpgd flcqlqckle
      781 dlkllmeqlq hyysihsdpy qvgqmacvak sskdgkwyra ailtqiseke fdvilvdygy
      841 qervlirdlc aikphflsle aqafrcslnh lvepiscrif twsreacrdf enfisssrgl
      901 ltcvicaivl iypnclsnlv dlqspftsak eflirhgsaq yctvskpfps svslysycys
      961 sfnikigsee eiyishiysp qefycqlsrn skdlemietk ireisypsdc pkynfskmrl
     1021 ciskyvedgl syralsmptd slsdflvyfv dfgnkqlvee smlravsdef pellftpmqa
     1081 ikcflsdlsd vdipaeinnw fagkffgkpl rakilsrepd gqfgvdlydg yqhinqkikm
     1141 lldaygkkhc dqaqcvkkdh ktnenkkkav slkgkienny hhnvsktsli thsesktdql
     1201 mnprsiyarl lkpsvcckve pvsknkvkks lqdelknkgv kivprlahil dehdagqksv
     1261 rvvsqssire lnqatsknih sharpqikdl pqpkiylnak vrgyvsnisn pasfhiqlae
     1321 henviirlaa alnarrasmv rerksvkpmv gdlvvaeysg dnaiyravik kilsrnsyev
     1381 efidygntav vstskmfeik kefltipqlg vhsflsgvkw nepneiwdrk tvdyfasrvs
     1441 nkavsceflk rhkqkwevnv icdekcvine lvkwtaclkl qrtvlqmpqv vsqkvgpvds
     1501 emkkggsdgy egsvilqpsy qlvsipfeel kpgqlekaei lhvsksgtfy vklsknkkil
     1561 sdltvlitke vrnpaflsve niekglecla kskntfewyr skvakyvdek vlvflvdcgr
     1621 yeivplcntk vlsneirnip rqavpckwiw fenfrkmpfe siadlfarle inilflkyld
     1681 sawkvdilid glllleylnl ntvhieenkf rssgiicsve sktpvspcti rsftwtqlqn
     1741 gkqysgiata vsdpsdfcvq ledffdtmks lfmllsdlpe dlqtvpqdhi ipgssclfky
     1801 esedqwnrve iskvsdqnll ltlidygfsv yipysdikil kvvpeellnl prlsyscilh
     1861 gvlpaegrhw teeakrffqd flskpglvfq frgysfetkl kvdiiheknn ladmlvasgl
     1921 aiyskdsvhl devtttgsie vqykseskpi cqlldqnnyk ieninctcte kqvlknqkti
     1981 krkdvfkhll kkshisrrlq sgksvlrrkk vdtgkhnprs titfdtcata sfwelpnglk
     2041 nntncienif aklseglqen ntvdlrttgk alhvnevmvs khlkalvrlm lvkrvvlksn
     2101 lghrvkrlws qavwcpqllc eschpiqtgy svkagtvaqg lhllylvdre hllmnrfqke
     2161 ealyeyarga kgnnsmarre lccrepelwe pragvlhqpr fsgaeeadgm kktakmpfff
     2221 kfikkntsqn adrkncslvq kdllgppsqe gllshlhqqp asfpsiglkr dvtgltsedr
     2281 esgfmiasll qvplevdyqr ntgipnmmdv gppse
//
LOCUS       XP_061012083             712 aa            linear   MAM 02-DEC-2023
DEFINITION  dynein regulatory complex protein 1 [Dama dama].
ACCESSION   XP_061012083
VERSION     XP_061012083.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156100.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..712
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..712
                     /product="dynein regulatory complex protein 1"
                     /calculated_mol_wt=83659
     Region          <33..375
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          99..200
                     /region_name="NYD-SP28"
                     /note="Sperm tail; pfam14772"
                     /db_xref="CDD:464307"
     Region          632..685
                     /region_name="NYD-SP28_assoc"
                     /note="Sperm tail C-terminal domain; pfam14775"
                     /db_xref="CDD:464309"
     CDS             1..712
                     /gene="DRC1"
                     /coded_by="XM_061156100.1:1..2139"
                     /db_xref="GeneID:133065295"
ORIGIN      
        1 mnppgslgvl eekeeehlat pilgpsihsd npqeriqarr lriaarlear rrealgeyld
       61 gkkeseedqs ksykqkeesr lklaklllcg telvtniqva tdtreihrrv eeeeikrqrl
      121 eklenevkts qdkfdeitvk weegkqrrip qelwemlnaq qvhcaglied knklisellq
      181 elkikddqyv kdlkkqsddi clllermeeq vknvmktfrq elqniekafe verqelltsn
      241 kkkweralqa hnakeleylm nrikkvedye kqlnkqrvwd ceeyntikik leqdvqileq
      301 qlqqmkatyq lnqekleynf qvlkkrdees tviksqqkrk inrlhdvlnn lrskynkqvk
      361 qfqeenqslt sdykrlvlqf kelqkamrhf aliddkqfre iwlmneeeak dlinrafdvd
      421 riihthhlgl pwmapnfwfl knvgpisqqq qksatqilee vlmeaeeega dedssgsesy
      481 ldlpkqvsar ttrkilmllc desgfliesk llslllplek secyllrlda vfsalgiene
      541 ddlyklvnff lkyqthhspp sqepldlrae kegslvdgks qekepppspk lihpndvlki
      601 leafvmglrk pkdswvpvkl lkvvrddskd seywkalttv ipattenlwd alytalekyh
      661 lvltqraell iensslerqn telqqllqqy ldtkinselq vpptqvfrvp tk
//
LOCUS       XP_061012084             408 aa            linear   MAM 02-DEC-2023
DEFINITION  proline-rich protein 30 [Dama dama].
ACCESSION   XP_061012084
VERSION     XP_061012084.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156101.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 12% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..408
                     /product="proline-rich protein 30"
                     /calculated_mol_wt=43457
     Region          1..378
                     /region_name="DUF4679"
                     /note="Domain of unknown function (DUF4679); pfam15728"
                     /db_xref="CDD:434888"
     CDS             1..408
                     /gene="PRR30"
                     /coded_by="XM_061156101.1:1..1227"
                     /db_xref="GeneID:133065296"
ORIGIN      
        1 mlppnkaqvl lrntaspgrp pqgpsqtads lfynlqpqsr qqslrstqps cspprwshsa
       61 gshlyssdsn sdfvlhpcss slsnsptffh qnclslsppc ssspsrrlfp satlthsssp
      121 sqpqnssfpg spcqspfhle dlptstltsp spsppslgvh sngqawhshq yrktrspgee
      181 gvcvasgkdp aefkdpgala qalvlhlghr riahdlqlll lqrlwlgqtd kapvveypvc
      241 lvclrlrtps cpipryrtgp rllafpqllp ctqgkesgpl rmgigfglrl pqgqakalhl
      301 lpkrkpeeag pqakaaqasg cqaqaaqapa alaqadlglg tlsqngslrs agrqslnstr
      361 hsesltqpdi svkrrpasta pqkdgvvcsh lkakngihap gfrqpeag
//
LOCUS       XP_061012085            4947 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C2orf16 homolog [Dama dama].
ACCESSION   XP_061012085
VERSION     XP_061012085.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156102.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4947
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..4947
                     /product="uncharacterized protein C2orf16 homolog"
                     /calculated_mol_wt=551274
     Region          4648..4897
                     /region_name="Fibrinogen_BP"
                     /note="Fibrinogen binding protein; pfam08017"
                     /db_xref="CDD:311808"
     CDS             1..4947
                     /gene="SPATA31H1"
                     /coded_by="XM_061156102.1:1..14844"
                     /db_xref="GeneID:133065297"
ORIGIN      
        1 mapiwgltip lppyvsllll fgslvwglwm lfsgkqnreq vaaktcseas kqhilkkiqk
       61 ftgqkdllff ssrlmtnqlq dpqleknlrm scieanlkhf selpvgwtqe yvlwsmdrsl
      121 qqilqhlest rsslmelglp epqdmissst ssvfvaqepv lpccdcknae hstdssissg
      181 ssyssslshl pvfseettwq frsrslpilp qnqppvfrnq grslpsfrls elgkseffqn
      241 letlsslshq stfinslfes pdlhrqgekt kdkrrsesdl tsdhkpniif kerpllsgst
      301 piqlsplarw eleghmawkv ctlreqtvpl pvreswamln ylievqggvp epqkpqiqls
      361 mpihqsteqn innespdlps lqlqgntgve sglnrtetri sqtlipgkqs qpgygpqila
      421 srplmtsidi lppkslgadi tqeemtllkk dpkhvlelni kqrvlglpek riqqqqtqvp
      481 nmeltpqrpy qvtdsvkvtp lallqvmdsm gmipdshsev iesvglfqwp snevvkpmea
      541 metvhvnqkp sykviksvev tprpqqqvme srkitprpln qvidnvkvtp iallqvmdsm
      601 gmikkshppi iqsmgmtptm qyqvvesvkr stlldhqviq sgkmsprlqh avietveitp
      661 rphkvmqsvd vtsrpqspvt eslkitpgpv cqnmkslemi prplhqvmdy mkvtpvallq
      721 amdfmgiipp tkshviesgd lvpssqlqcm ecghlalpse fpgiktvels privqkdvkp
      781 velapkswsq dirseetapi plledvktpq mvestrltpk rqvesmknee liprahiqav
      841 nsvevdsrpn hqvtepegli swyqaseslg misepgyset eakltsdtgh hakesmgliq
      901 sslgstprsl sqasmqmnsm sfrgtlepmf qsvramdetp vsehttqesl elvpgsemqg
      961 mkskmltaep qdtkfvhlnl gpysevtess eislrseyan tetvglatfp veniqevipv
     1021 qpnsekesle stleprmqye isepllqnlk yvkltsessp lvveskqfvt gpkpqvtelt
     1081 pepqfqevms rqlesepklq dmkyvnllqq stttkmvese kpiqesvlqs mipeeltqev
     1141 qlqgvslgpe lhsvrfsels pepplqgerl ldlisgsphh svtsdeltpg spmqeiklsd
     1201 cipgpkhqsv vsiqlmakpq testkfaels sgpclqgvrf sdltpdpqhq gfehvqlmpg
     1261 tqlqdtkpvg fvtesslqls qglpventks ilsidgsqfh smksvkltse lqfqdmksee
     1321 lnlgsrqqdv kfseltsgpk lqgvkfgkqi pespfhsvts mettlelglq dsksakmspg
     1381 lqgvkqvgpw lqdvkfcdlt sgvqsqgvks selnsgpqlq yvkifeltpe pkvqgersmk
     1441 lasgpeqqgv kpemlgpkpl fqgikceaad qmssfegdis yklvsepqrp dvksmevspr
     1501 lqlpsvnyse larrpllqvm kssgltqrpq mqdvkpavrt pvskveglqs ealmpepqle
     1561 diksvkltpg phlgsmksiq ltskpqlgnv ksmvltpgse gedvkpvevt pgsklhglis
     1621 ellsselelk dvnsavltpg qhprgmkstl ltpspqlegk ksveitsgpl redvksvklt
     1681 sdsklqglks dvlalslrnq glktvtfipr tqlqdvkame lklgprmqde nsvflapwsl
     1741 lqgpqlqgmk preltakpqm qdveilqltp cpklqsltpv eetpdqelqf akpmkltprl
     1801 kkqvvksvna srrqkfqgvk svdlapkqqf qetalvnltp rpkqvseisv ispeqqcvns
     1861 eslkrgskse dgmswelipe lkfkdgklvd lnfelqlkgr esseltpesn iqgikskrlk
     1921 lepqlqsmks pkltpgpqlh qvksskstse pqlqdvktak fkqepqpesm khiqwipgce
     1981 fqdvksagls lksqpqggkf velksstqlr daksselhlg pkiqgtaylk sdlgpqlrrv
     2041 ktpelspgpq lqegkvlast sgpqfqgmki velnqkpqfg stktvqwmpa pvfqgvksll
     2101 nlelqpqcvk pteliqlrdm kssvltprpk lqdvqsltsl qesqaqglnv kpclqfssmk
     2161 scdltpkskl cdiksmmfks rlnlqdgksp lstpgpwlqe vkplqaapgt qlqgvkspll
     2221 tqepqfpevk sevlsqgsql qsdktielns plhlksmkss eltlqpklqg vksedfntgp
     2281 qwqglksskp pfetksqdkk vtelipglql qgtmfskltv gtktqgvkys dfdpgpcpql
     2341 qvlksselip asklqnvkll qkvksvelks gpqlqdikss kwitgiklqr vksmnfrsgs
     2401 nlqgvklsed ipreklqgvk svdlkpspkl qgtkpdltrk ipvvrsvesd sgqhlqdmkc
     2461 selimgiklq hvkskglssr phfqgvksse avlgttlqev ksmfnsepqi qskkcseltq
     2521 gtklqdeksl efnhglklqc gksdltqkre lqgvksvefn pepqrqgdks dlrlgwrlqd
     2581 lksvvpplqg mtsseltpkt kpqsgesmef itrpmwqdmk pfeltlgtkv qdvkslgfns
     2641 apqlqdrkls mltskaylqg vksmefnpva elqgakssgp iklqlmnste vnpglefqva
     2701 kscklalesk ihsgissksk arkqkqdekl cklnpwqelq svkvmvfspr thsqhiksse
     2761 sckgtkfqnv kslefnpdqq lqdmkssdlr lgtnhqgiqs lefnpgpqlq dtksselnps
     2821 tenqgrkskv lcvgpdlqgv nssafisepk lkcvnppgcq pgshlqglks elrpesksls
     2881 vtptecnpgp qmqcaksskl npepksqcln smgckcgppl qdikslelts gekcqymgte
     2941 vnpgtenqce tsmvfnprph cqglkselil gskflsvtpt ecnlgpqtqc ensselnpep
     3001 klqcvdsmkc kcgphlqgik speltsgtkc kgrkssdfnp gselqsiksv mfnpvhdlqd
     3061 ikceftpgtk sqgrtstkfn sdpqqqgmnc eelpshlrqh sirsvvfape plpcsqdvks
     3121 mksnllpqsq smnflgsssc lrsqcvksei sapepclqnm ksveltpgsq eqgmncqelt
     3181 sglqgvksgi sapestknfi pgpmltsvkf snlspesqqq gvkhleftpe pklqstrhak
     3241 sssmslqqai ksvelasesl fqrpksedlt prtssqmtgs seiiprpghq fvehaemipk
     3301 pmhrvpksvs ltsipiyqvi dsskmpqsla hqdtetveks vkmtqnpkgk amkasgmplk
     3361 lnlqvpefvd ltpvlrnqgl ksleltpkks hqiletlell sqsgsqvkes htgqlqqvve
     3421 segmtsgpkn hitetmgltf ktklqgeefl grspkpiskt tdaerysrpy pqaqesvevi
     3481 seqklprges ialitktfqd vpessemteg iqyqvpgsmg ltckrflkak qigqiaghte
     3541 saevttetwe qgegkmkhri shrishrtqs qnqsmkyset apgllgqite fmrispkple
     3601 qvtnstktql qvaqaigvkp vapirvatpv nvtpgppyqv vksvtltswp nsqmvdcvel
     3661 tskpqdvrps tsglrlqnak fkklstepky qtlkrmdltg fqivktvgpp lqivkseela
     3721 pgpipqiaep igvglkatny ldlfprlhlq epvesveltp rpntevksae lttqptytlk
     3781 aptvlnhkqg lqavkstgvk tgppqvmese dlnlnevcqn kdfeegssee dlqignyfsr
     3841 flhnssdsli sssvrtseld fwdskmpqvs svldiknlvt dilqpeesfi dldmiqsstf
     3901 slslhnqspd etvipvknsn sempgvdvip nertkrkhve esesslqrps qhspqdwisp
     3961 prffqaesga qralswpvlg rqrnvwesrs srprlprkyl snmlmlgnvl gttmerklss
     4021 ptslterate dtcqsiqnlf gvpaelmtss erlfekgqgt isqpsvvkny iqrhtschgh
     4081 gkktplrmwt rssmpsiiqh ysgsrtrikk tnskpcnisq evtqympvsc tgsqppapak
     4141 sesslniffa rrdsvpmeet ensqsdsqtr ifeskhslkp sylsqaktdf seqfqllqdl
     4201 qlkiaakllr sqippnvppp lasglvlkyp iclqcgrcsg fncchklqaa fgphlliypq
     4261 lhlvstpegh geirlhlgfr lrtgkrpqlp kyhrrdrpvt prslrstslr kakgytrask
     4321 sptstidfqs gssqspspie vhirrrqyds ssliekieir epghyeftqv hslsesdses
     4381 nqdekwakvr tkkthdskyp mkripkgvrs qntkfytngr aiiqsssrel pnqlrrkrsg
     4441 asqtttaslk rqpkksshpk fiqllfqglk qaiqtahrim alagqkpeht arsdyfwssk
     4501 tylpkqkard ycltrdskrh rmptlklrqs esvtkqestr weetdqfrpa qqpkrdssfq
     4561 lrpkqlpkpt vsqrsatlkn tstsqclgpv qndsssrakk nfnrneisnq esknfkpgir
     4621 vhaggrllqp gslmkrtshs hlkgkpthke rnhqsfgfsr ertpcyssgr sqyspsergq
     4681 hstsdrshrs asershhsas ershrsasgr shrsasersh qspsqrshqs asershhsas
     4741 ershrstser shrsasersh rsasershps psqrshhsls ersyrgpser rcrspserrc
     4801 rspserrcrs psersnrslf ekihrssser rehsaserrq hkpsegsgqs psershnnpl
     4861 kdrlkhsspr erprqglskd fksnsntspr dhtknpqrrp prkllggstr sppgsrtrly
     4921 irerrgerkw rwsgrspwvn llgvere
//
LOCUS       XP_061012086             370 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: retroviral-like aspartic protease 1 [Dama
            dama].
ACCESSION   XP_061012086
VERSION     XP_061012086.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156103.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 11% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..370
                     /product="LOW QUALITY PROTEIN: retroviral-like aspartic
                     protease 1"
                     /calculated_mol_wt=39962
     Region          225..317
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(239,241,243,270..272,310)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            239..241
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            239
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(270..273,277..280)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     CDS             1..370
                     /gene="ASPRV1"
                     /coded_by="XM_061156103.1:1..1113"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:133065298"
ORIGIN      
        1 mdaegrgtdp arrtgcwreg ggrsrggasr tkangepwrp rlgikkalqs eqatalxpss
       61 psdslrlvpp acqqrapsns llrealfssv ialtllcgfl ylpwvvaavp egsrgmagsg
      121 arsrerafvp elfdganmap hlwlhrfevi ndlnhwdhit klrflkeslr gdalgafnsl
      181 spedqgnyga vketllktfg gpeaahshlp keivfansmg kgyylkgkig kvpvrflvds
      241 gaqvsvvhps lweevtdgdl dtlrpfenvv kvangaemki lgvwdtvvsl gklklkaafl
      301 vanasaeeai igtdvlqdhn avldfqhrtc tlkgkkfrll pvggsledef dlelieeeps
      361 seeggqqlsc
//
LOCUS       XP_061012087             291 aa            linear   MAM 02-DEC-2023
DEFINITION  gastrokine-3-like [Dama dama].
ACCESSION   XP_061012087
VERSION     XP_061012087.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156104.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 39% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..291
                     /product="gastrokine-3-like"
                     /calculated_mol_wt=31556
     Region          167..254
                     /region_name="BRICHOS"
                     /note="BRICHOS domain; pfam04089"
                     /db_xref="CDD:461168"
     CDS             1..291
                     /gene="LOC133065299"
                     /coded_by="XM_061156104.1:1..876"
                     /db_xref="GeneID:133065299"
ORIGIN      
        1 msdeglymlp daypntitfa acclgstdym plslealgev fvdatvgter gpmggapaes
       61 werffkdlww lpitdnrkpp gpslqpappg ppalppghwh vpqpllrtys shspivpsil
      121 vvlflapcla lmnisdnhpl dgsvgtqsih vnafrgmvsi rdnnvlsewd gvldyknall
      181 vaklfskmac vlaqmdeavf ptlddivkal dhqtskhypa thgltytvlp nrvknlaqfg
      241 apikdmcrav ptyfaqqqke gtalaidpds cfeiqilsfl glsicgeipg l
//
LOCUS       XP_061012088             404 aa            linear   MAM 02-DEC-2023
DEFINITION  sodium- and chloride-dependent creatine transporter 1-like [Dama
            dama].
ACCESSION   XP_061012088
VERSION     XP_061012088.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156105.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 21% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..404
                     /product="sodium- and chloride-dependent creatine
                     transporter 1-like"
                     /calculated_mol_wt=45198
     Region          <20..326
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
     CDS             1..404
                     /gene="LOC133065302"
                     /coded_by="XM_061156105.1:1..1215"
                     /db_xref="GeneID:133065302"
ORIGIN      
        1 mtasykrded avnekadnvf syaiglgalt algsynrfnn ncykdaiila linsgtsffa
       61 gfvvfsilgf mateqgvhis kvaesgpglv fiaypravtl mpvaplwaal fffmllllgl
      121 dsqfvgvegf itglldllpa syyfrfqrei svalcctlcf vidlsmvthg gmyvfqlfdy
      181 ysasgttllw qafwecvvva wvygadrfmd dvacmigyrp cpwmkwcwsf ftplvcmgif
      241 ifnmvyhepl vynntyvypw wgeavgwafa lssmlcvplh llgcllrakg tvaerwqhlt
      301 qpiwglhhle yraqdsdvrg lttltpvses skvvvvqkfs eireeqneeq lcfgltcwvm
      361 aegvdtavsg hhaavispmp qmvpqlcipf pgrlpqpheq stcl
//
LOCUS       XP_061012089             649 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing and planar cell polarity effector protein
            fritz homolog [Dama dama].
ACCESSION   XP_061012089
VERSION     XP_061012089.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156106.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..649
                     /product="WD repeat-containing and planar cell polarity
                     effector protein fritz homolog"
                     /calculated_mol_wt=73517
     Region          78..621
                     /region_name="Frtz"
                     /note="WD repeat-containing and planar cell polarity
                     effector protein Fritz; pfam11768"
                     /db_xref="CDD:432059"
     CDS             1..649
                     /gene="WDPCP"
                     /coded_by="XM_061156106.1:1..1950"
                     /db_xref="GeneID:133065303"
ORIGIN      
        1 mrgvcgdals gaaggcasst lrrqdrdsfc hqmsfcltel hlwslkntlh igdrdigiyq
       61 yydkkepsat dhgnleekqr laesrdfpwt lknrrpeklr dslkeleelm qnsqcvlskw
      121 knkyvcqllf gsgvlaslsl sgpqlekvvi drslvgklis dtvsdalltd gfiilsflaq
      181 nklcfiqfak kmsspdtnrr leklsaldyk isyyeipgpv nrttqrrlai scvqdtivcw
      241 wplvsddawp wtpissekdr anllllsyaq gtlevlssvr tewdpldvrf dtkhpnqvlt
      301 vecsisvdre paadscvyec vrnkiqcvsv triplkskai sccrnatedk lilgcedssv
      361 ilyethrrvt llaqaellps lischpsgai llvgsnqgel qifdmalspi niqllaedns
      421 pretlqfkkf fdvssslvqm qwiapqvvsk kpesgdiynl lflrfdrgpl gvllfklgif
      481 tqghlglvdi ifqyvhcdei yeainilssm nwdtlgyecf ismcaivnhl lrqkltpere
      541 aqleaslgtf yaptrplldt tvleyrdqis kyarrffhhl lryqrfekaf llavdigard
      601 lfmdihylal dkgelalaev arrrasdida esitsgvgdw sryveqkhh
//
LOCUS       XP_061012090             120 aa            linear   MAM 02-DEC-2023
DEFINITION  multifunctional methyltransferase subunit TRM112-like protein [Dama
            dama].
ACCESSION   XP_061012090
VERSION     XP_061012090.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156107.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..120
                     /product="multifunctional methyltransferase subunit
                     TRM112-like protein"
                     /calculated_mol_wt=13724
     Region          2..117
                     /region_name="Trm112-like"
                     /note="eukaryotic tRNA methyltransferase 112, a partner
                     protein of both rRNA/tRNA and protein methyltransferases,
                     and similar proteins; cd21089"
                     /db_xref="CDD:411041"
     Site            order(2,5,7..10,12,21,38,41,44,48,50,111,113..117)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:411041"
     CDS             1..120
                     /gene="LOC133065305"
                     /coded_by="XM_061156107.1:1..363"
                     /db_xref="GeneID:133065305"
ORIGIN      
        1 mkllthnlls lhvwgvrscg fplhlqatev hinpvefnpn fvacmihkle wevlleaans
       61 lhlievhkei iqgykhdkkf lrkrhhmlle vnvlegilqc pesgclfpis hgipkmlavw
//
LOCUS       XP_061012091             203 aa            linear   MAM 02-DEC-2023
DEFINITION  solute carrier family 25 member 3-like [Dama dama].
ACCESSION   XP_061012091
VERSION     XP_061012091.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156108.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..203
                     /product="solute carrier family 25 member 3-like"
                     /calculated_mol_wt=22213
     CDS             1..203
                     /gene="LOC133065306"
                     /coded_by="XM_061156108.1:1..612"
                     /db_xref="GeneID:133065306"
ORIGIN      
        1 mveeytceyg svkfyalcgf ggvlscglya ggptealmdf qlhskrmvsv vwpkdgpqps
       61 latpcrgsas lafmkytmmk facpertvea lykfvvpkpr secskpeqlv vtfvagyiag
      121 vfcaivshpa nsmvsvlnke kgssasqvlk rlafkgvwkg lsaciimigt ltalqwfkvy
      181 frlprppppe mpeslkkklg ytq
//
LOCUS       XP_061012092             145 aa            linear   MAM 02-DEC-2023
DEFINITION  antimicrobial peptide NK-lysin-like [Dama dama].
ACCESSION   XP_061012092
VERSION     XP_061012092.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156109.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..145
                     /product="antimicrobial peptide NK-lysin-like"
                     /calculated_mol_wt=15779
     Region          64..138
                     /region_name="SapB"
                     /note="Saposin (B) Domains; smart00741"
                     /db_xref="CDD:214797"
     CDS             1..145
                     /gene="LOC133065308"
                     /coded_by="XM_061156109.1:1..438"
                     /db_xref="GeneID:133065308"
ORIGIN      
        1 mtswavllia svllvapgla fssltpehhd qatahlcngn elcqglsped pqgdlvlqre
       61 elnlicgycq kimqmlkdmv gnnpsknvii hatskvcnkm gllsilckmi mknflhricq
      121 dilarkkpqa icvdiklckg kagli
//
LOCUS       XP_061012093             569 aa            linear   MAM 02-DEC-2023
DEFINITION  paired box protein Pax-8 [Dama dama].
ACCESSION   XP_061012093
VERSION     XP_061012093.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156110.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 21% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..569
                     /product="paired box protein Pax-8"
                     /calculated_mol_wt=61055
     Region          121..245
                     /region_name="PAX"
                     /note="Paired Box domain; smart00351"
                     /db_xref="CDD:128645"
     Site            order(126..127,132,134..136,138,143,155,157,166,169,
                     171..172,176,185..191,193..196,215..217,236,238..239,242,
                     245)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238076"
     Region          456..568
                     /region_name="Pax2_C"
                     /note="Paired-box protein 2 C terminal; pfam12403"
                     /db_xref="CDD:463563"
     CDS             1..569
                     /gene="PAX8"
                     /coded_by="XM_061156110.1:1..1710"
                     /db_xref="GeneID:133065310"
ORIGIN      
        1 marralckcg qragvaarpa vmdgagpdar kaiygaraqr yrfgpverri hrhrrgdprg
       61 rpkvsrsgsl hhrrlsqqha pfpsrcqevs eatavlaplc graafggaer kshqcsreqr
      121 ghgglnqlgg afvngrplpe vvrqrivdla hqgvrpcdis rqlrvshgcv skilgryyet
      181 gsirpgvigg skpkvatpkv vekigdykrq nptmfaweir drllaegvcd ndtvpsvssi
      241 nriirtkvqq pfnlpmdscv atkslspght lipssavtpp espqsdslgs tysingllgi
      301 aqpgsdskrk mddsdqdscr lsidsqssss gprkhlrtdt fsqhhlesle cpfdrqhype
      361 ayaspshtkg eqglyplpll nsalddgkat ltpsntplgr nlsthqtypv vadphspfai
      421 kqetpevsss sstpsslsss vfldlqqvgs gvpagasvpp fnafphaasv ygqftgqall
      481 sgremvgptl pgypphipts gqgsyassai agmvagseys gnayshtpys syseawrfpn
      541 ssllsspyyy sstsrpsapp ttatafdhl
//
LOCUS       XP_061012094             158 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-36 beta [Dama dama].
ACCESSION   XP_061012094
VERSION     XP_061012094.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156111.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 11% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..158
                     /product="interleukin-36 beta"
                     /calculated_mol_wt=17853
     Region          10..156
                     /region_name="beta-trefoil_IL36"
                     /note="beta-trefoil domain found in the family of
                     interleukin-36 (IL-36) and similar proteins; cd23300"
                     /db_xref="CDD:466782"
     Site            order(11,46,48,61,63,109,111,116,152..154,156)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:466782"
     CDS             1..158
                     /gene="IL36B"
                     /coded_by="XM_061156111.1:1..477"
                     /db_xref="GeneID:133065311"
ORIGIN      
        1 mespmsqenp sylhirdsqq mvwivkgnsl iavpssnnvk pvilsliacr dkefhkegeg
       61 tphylgikdk nlclycteiq gyptlqlkee nimnlynqpk gekcflfyrn yegstvvfqs
      121 vsypgwfiat sseagqpitl tkergtakst nyyledgr
//
LOCUS       XP_061012095             201 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-36 alpha [Dama dama].
ACCESSION   XP_061012095
VERSION     XP_061012095.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156112.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 29% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..201
                     /product="interleukin-36 alpha"
                     /calculated_mol_wt=22603
     Region          51..198
                     /region_name="beta-trefoil_IL36"
                     /note="beta-trefoil domain found in the family of
                     interleukin-36 (IL-36) and similar proteins; cd23300"
                     /db_xref="CDD:466782"
     Site            order(53,88,90,103,105,151,153,158,194..196,198)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:466782"
     CDS             1..201
                     /gene="IL36A"
                     /coded_by="XM_061156112.1:1..606"
                     /db_xref="GeneID:133065312"
ORIGIN      
        1 mppfsrplal allsslgsgf rpecryrcfc wkvgyvqege qereqvlsri hpvlvdiqdv
       61 nhlvwvlqgq tltavprkdq mdpvtvtlis ckytetlekg rgnpvylglk epelclfctk
      121 vkgqpvlqlq eqnimdlyhq tepvkpflfy hdqkgrassf esvafpgwfi gscsngscpv
      181 iitqelgkiy ttdfgftvlq a
//
LOCUS       XP_061012096             276 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-37 [Dama dama].
ACCESSION   XP_061012096
VERSION     XP_061012096.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156113.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 22% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..276
                     /product="interleukin-37"
                     /calculated_mol_wt=30476
     Region          55..204
                     /region_name="beta-trefoil_IL37"
                     /note="beta-trefoil domain found in interleukin-37 (IL-37)
                     and similar proteins; cd23301"
                     /db_xref="CDD:466783"
     Site            order(71..73,78,80,83..87)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:466783"
     CDS             1..276
                     /gene="IL37"
                     /coded_by="XM_061156113.1:186..1016"
                     /db_xref="GeneID:133065313"
ORIGIN      
        1 msvleenpgv kmdcedwerd elqcssedpv rdalepgpsl tsmnsahagp rvkakgpekf
       61 tihdrdhkvl vldsetlrav pdktyilpet ffvlasrvks acenkgspil lavskgelcl
      121 ccdtkkgqsq pslqlkkkkl snlaaqkkpt clpfifyrnk vgswntlesa ahpewfvcts
      181 nhpgepvgmt kchgrrkhte fsfqhicnae mspseyspge agiawavrle ldpgsvgqrl
      241 lppesepaev ealrppgela eeqwllqelh lalnra
//
LOCUS       XP_061012097             505 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: 5'-nucleotidase domain-containing protein 4
            [Dama dama].
ACCESSION   XP_061012097
VERSION     XP_061012097.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156114.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 8% of CDS bases
            internal stop codons :: corrected 3 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..505
                     /product="LOW QUALITY PROTEIN: 5'-nucleotidase
                     domain-containing protein 4"
                     /calculated_mol_wt=56753
     Region          35..468
                     /region_name="5_nucleotid"
                     /note="5' nucleotidase family; cl17687"
                     /db_xref="CDD:473086"
     CDS             1..505
                     /gene="NT5DC4"
                     /coded_by="XM_061156114.1:1..1518"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 3 bases at 3
                     genomic stop codons"
                     /db_xref="GeneID:133065314"
ORIGIN      
        1 masvdgrelt eargepqave ldwhqrifvn cglmmgkfgc fgfdvdktla aykspayetl
       61 afelllqrxv cigypheilr ytydptfptr glvfdalyrn llkvdaqgnv lqgtygfssl
      121 srgimaqcsl pplevwsfyp skfiqrddlq rfhilnmmfn lletylyacl vdffsgcsry
      181 incdmgyqhg nlfmsfqslf qdvmdamdyv hhslcsllwg clkektlddl ekxldkarip
      241 vlldkmrevg kvflatnssy nytdaimtyl lgtgeaeaaa rpwrsyfdli vvdtqkphff
      301 aegtvlrqvn mvmqgaplcp lqdtdklcvg tytgpyqhca vysgrsldvv cellgvqgmd
      361 ilyigdhifg dilkskkqqg wqtclvvpel swelgiwaqe kexmetlkrl dthladlyqh
      421 tdgssyglql instkreiqm phetaveqer aglvpafslf scsqrlsywe vraasglage
      481 frdlgvplgl eqgsqwsslr glppp
//
LOCUS       XP_061012098             148 aa            linear   MAM 02-DEC-2023
DEFINITION  small ribosomal subunit protein eS19-like [Dama dama].
ACCESSION   XP_061012098
VERSION     XP_061012098.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156115.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..148
                     /product="small ribosomal subunit protein eS19-like"
                     /calculated_mol_wt=16294
     Region          5..141
                     /region_name="Ribosomal_S19e"
                     /note="Ribosomal protein S19e; pfam01090"
                     /db_xref="CDD:460058"
     CDS             1..148
                     /gene="LOC133065316"
                     /coded_by="XM_061156115.1:31..477"
                     /db_xref="GeneID:133065316"
ORIGIN      
        1 mpgvtvkdvn qqefvralaa flkksgklkv pewvdtvkla khkelapyde nwfytraast
       61 awhlyprgga gvgsmtkiyg ghqrnnvips hfsrgsksva qqvlqvlegl kmvekdqdgg
      121 crltpqgqrd ldritgqvaa aleqmmld
//
LOCUS       XP_061012099             386 aa            linear   MAM 02-DEC-2023
DEFINITION  ankyrin repeat domain-containing protein SOWAHC [Dama dama].
ACCESSION   XP_061012099
VERSION     XP_061012099.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156116.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 29% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..386
                     /product="ankyrin repeat domain-containing protein SOWAHC"
                     /calculated_mol_wt=40933
     Region          <25..106
                     /region_name="PHA03264"
                     /note="envelope glycoprotein D; Provisional"
                     /db_xref="CDD:223029"
     Region          134..161
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <166..>245
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          166..202
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          204..236
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..386
                     /gene="SOWAHC"
                     /coded_by="XM_061156116.1:1..1161"
                     /db_xref="GeneID:133065318"
ORIGIN      
        1 megpvkgraq dlqaeleqpv ggaiggspeq rasvrgrpke pedeagdrad pfdpvegipn
       61 aplgrrprgg pvgegarpea lgdapptprp grtaprdpaa ggspqlrrgp ggadgaaaee
      121 egagsltldp lehawmlsaa dgrwdslegl lacepgllak rdfitgftcl hwaakhgrqe
      181 llallvrfag qhrlpvnina rtsggytalh laamhghvev vkllvgayda dvdvrdysgr
      241 kasqylspst aeeirtlvga ldedegesaa gsgggrwrls rvlpshlisg rlshaledgg
      301 dhhhhlaegl aaskakepsr kvsgsssgrm kprlnkirfr tqiihttpsf rdpeqpleeg
      361 edeeedrslk ghsssfklrp ksnvfg
//
LOCUS       XP_061012100             244 aa            linear   MAM 02-DEC-2023
DEFINITION  protein eva-1 homolog A [Dama dama].
ACCESSION   XP_061012100
VERSION     XP_061012100.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156117.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 17% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..244
                     /product="protein eva-1 homolog A"
                     /calculated_mol_wt=26212
     Region          122..244
                     /region_name="FAM176"
                     /note="FAM176 family; pfam14851"
                     /db_xref="CDD:464347"
     CDS             1..244
                     /gene="EVA1A"
                     /coded_by="XM_061156117.1:1..735"
                     /db_xref="GeneID:133065319"
ORIGIN      
        1 mapfkprvag lgkgrgwegr sraewvewrg qtegnettfs shrlvillrl lglppppvsa
       61 qagtacpqvs tgvsfriasa slnlghsfaa sssqgsapgp papppapgar tpevraggsg
      121 eenpegaaly fvsgvcvglv ltlaalvmrs schtdccqrs qkllkdqess snssdsedgs
      181 ldaasdisvr rhrrfertln knvftsveel eraqrleere riireiwmng qpeapgtrsl
      241 nryy
//
LOCUS       XP_061012101             546 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: forkhead box protein P4-like [Dama dama].
ACCESSION   XP_061012101
VERSION     XP_061012101.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156118.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 16% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..546
                     /product="LOW QUALITY PROTEIN: forkhead box protein
                     P4-like"
                     /calculated_mol_wt=58452
     Region          <89..>304
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     Region          182..248
                     /region_name="FOXP-CC"
                     /note="FOXP coiled-coil domain; pfam16159"
                     /db_xref="CDD:465036"
     Region          333..419
                     /region_name="FH_FOXP4"
                     /note="Forkhead (FH) domain found in Forkhead box protein
                     P4 (FOXP4) and similar proteins; cd20067"
                     /db_xref="CDD:410841"
     Site            order(337..338,356..357,360,374,376,379,382..383,386,393,
                     400,402)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410841"
     CDS             1..546
                     /gene="LOC133065322"
                     /coded_by="XM_061156118.1:1..1641"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /db_xref="GeneID:133065322"
ORIGIN      
        1 mvlqgrgckk pfgelcagvg vrpcpleasa pgqllkelkg qngcllfvvv pwssssrpsc
       61 ahaaaaawtw gcssqplplt selrsgkgap gplqtlpqaa vcpmdlpqlw kgegapgqpa
      121 edsvkqegld ltgsattats faappkvspp pphhtppsgq ptvltprrds ssheetpgsh
      181 alygpgeckw pgcetlcedl gqfikhlhte haldrstaqc rvqmqvaqql esqlakeser
      241 lqavmthlhm rpsepkpfsq pvpvsaagsf pdglahppts aaapvtplrp pglgsaslhs
      301 ggparrrssd kfcspissel aqnhefykna dvrppftyas lvrqailetp drqltlneiy
      361 nwftrmfayf rrntatwkna vrhnlslhkc fvrvenvkga vwtvdereyq krrppkmtgs
      421 ptlvknmisg lsygalnasy qaalaessfp llsspgmlnp gsassllplg hddagapvep
      481 lpsngssspp rlsppqyshq vqvkeepaea eedrrpgppl gplnpstagp pedrdleeel
      541 pgeels
//
LOCUS       XP_061012102             268 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: protein STPG4 [Dama dama].
ACCESSION   XP_061012102
VERSION     XP_061012102.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156119.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 17% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..268
                     /product="LOW QUALITY PROTEIN: protein STPG4"
                     /calculated_mol_wt=30266
     CDS             1..268
                     /gene="STPG4"
                     /coded_by="XM_061156119.1:1..807"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:133065323"
ORIGIN      
        1 mgllpwpryr lpslpsilkt lfpllgsakn tsclyswvlg plrflpsrkp tqkssferer
       61 wwrialtntp npgtyhlktf ieesllnpvi atynfknegr kkppllqrnd pvlndlpqym
      121 ppdfldllkk qvatysfkdk prsspsmlvy rdqsvklspg qyellpppvp kqasrsfvfr
      181 stvqrfptgc fipregpgpg hydlkipsas svtscfqsrv prflpacskt pgpgaytasa
      241 qfpkqprtia kmgrehslff nnxnwllk
//
LOCUS       XP_061012103             220 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 247 [Dama dama].
ACCESSION   XP_061012103
VERSION     XP_061012103.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156120.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..220
                     /product="transmembrane protein 247"
                     /calculated_mol_wt=24544
     Region          1..213
                     /region_name="TMEM247"
                     /note="Transmembrane protein 247; pfam15444"
                     /db_xref="CDD:464721"
     CDS             1..220
                     /gene="TMEM247"
                     /coded_by="XM_061156120.1:1..663"
                     /db_xref="GeneID:133065325"
ORIGIN      
        1 mamedremme grgagescpt fprmapddpm segkpraslp qeadtpkpds sydhleemet
       61 cedggcpgpp kslsskagpa atkgqagdgp epaelpsvpa apgtpvrern aemelekarm
      121 efeltrlryl heenerqrqh eeameqlrqq atprlfsggl qdlllpqnqf amflycfifi
      181 hiiyvtkemi fflfskhylf civaillcli ktlcavvvhp
//
LOCUS       XP_061012104             865 aa            linear   MAM 02-DEC-2023
DEFINITION  rho guanine nucleotide exchange factor 33 [Dama dama].
ACCESSION   XP_061012104
VERSION     XP_061012104.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156121.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..865
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..865
                     /product="rho guanine nucleotide exchange factor 33"
                     /calculated_mol_wt=97157
     Region          <5..>127
                     /region_name="Mplasa_alph_rch"
                     /note="helix-rich Mycoplasma protein; TIGR04523"
                     /db_xref="CDD:275316"
     Region          268..435
                     /region_name="RhoGEF"
                     /note="RhoGEF domain; pfam00621"
                     /db_xref="CDD:459876"
     Region          <473..>785
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     CDS             1..865
                     /gene="ARHGEF33"
                     /coded_by="XM_061156121.1:1..2598"
                     /db_xref="GeneID:133065330"
ORIGIN      
        1 mektktkqgd nehkpmnnps aqiyqlqala selktgftea mqelsriqhg eyaleekvks
       61 crcsmeekvt emknslnyfk eelsnamsmi qaitskqeem qqkieqlqqe krresrkvka
      121 kktqkeehgs qagpaqaqgs pfrsinipep vlpsedftnl lpsqayekaq etrsmhvgds
      181 nvkgimgsgm tptpeaeenl kpclsadiqp kshlppgvwr qpkdtkdwge eyvtkdhpdk
      241 lkevgqgrhs slenvlcets laakrqtval elleserkyv inislilkik atfqgsdgkr
      301 nskerslfpg slryivqqhl dllhalqerv lkwprqgvlg dlflkltnde nnfldyyvay
      361 lrdlpecisl vhvvvlkegd eeiksdiytl ffhivqripe ylihlqnvlk fteqehpdyy
      421 lllvcvqrlr vfishytllf qcnedlliqk rkklkkssma klykglasqc anagqdaspt
      481 agpeavrdsg ihseemlqpy psapssgpav thlmppvkks qqqqslmesm qpgkpsdwem
      541 egrkherpes llapaqfcaa eqdvkalagp lqaipemdfe pspaeqlgnv erslrapael
      601 lpdarsyvpa ayeefeygge ifalpapyde epfqapalfe ncspassess ldicflrpvs
      661 fameaerpeh plqplpksat spagssgayk leaaaqahka kplsrslkef prapppegva
      721 prlystrsss ggraplkaer aaqahgpaas argaprtffp qqrsqsekqt ylevrremhl
      781 edatrfcpke ereseqtsfs dqnprqdqkg gfrssfrklf kkkssgseyr ektnenpsmd
      841 psptkqdffr nrlalaneld qgtav
//
LOCUS       XP_061012105             239 aa            linear   MAM 02-DEC-2023
DEFINITION  MORN repeat-containing protein 2 [Dama dama].
ACCESSION   XP_061012105
VERSION     XP_061012105.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156122.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 28% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..239
                     /product="MORN repeat-containing protein 2"
                     /calculated_mol_wt=26433
     Region          <116..225
                     /region_name="COG4642"
                     /note="Uncharacterized conserved protein [Function
                     unknown]"
                     /db_xref="CDD:443680"
     CDS             1..239
                     /gene="MORN2"
                     /coded_by="XM_061156122.1:1..720"
                     /db_xref="GeneID:133065331"
ORIGIN      
        1 melrhrkrar gppiqpfisq nsaprpqmyn pqlstqarpg rrprilllqt hrplpdrldp
       61 tgpavpgrps nhvalgaelr lpslqatela aqgesqspen lsrspvstpe vfkinfifpn
      121 gdkydgdctr tssgvierng igihttpngi vytgswkndk mngygklehf sgavyeghfk
      181 dnmfhglgty ifptgakytg nfnenrvege gqytdiqgle wcgnfhftaa pglrlklhm
//
LOCUS       XP_061012106             106 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein uL16-like [Dama dama].
ACCESSION   XP_061012106
VERSION     XP_061012106.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156123.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..106
                     /product="large ribosomal subunit protein uL16-like"
                     /calculated_mol_wt=12074
     Region          <3..100
                     /region_name="Ribosomal_L16_L10e"
                     /note="L16 is an essential protein in the large ribosomal
                     subunit of bacteria, mitochondria, and chloroplasts. Large
                     subunits that lack L16 are defective in peptidyl
                     transferase activity, peptidyl-tRNA hydrolysis activity,
                     association with the 30S subunit; cl00353"
                     /db_xref="CDD:469737"
     Site            order(5..6,9..10)
                     /site_type="other"
                     /note="L27 interface [polypeptide binding]"
                     /db_xref="CDD:238714"
     CDS             1..106
                     /gene="LOC133065335"
                     /coded_by="XM_061156123.1:1..321"
                     /db_xref="GeneID:133065335"
ORIGIN      
        1 mglqtgmrga fgkpqgtvar vhlgqvimsi rtklqnkehv iealrwakfy fpgrqkihif
       61 kkwrftkfst defenmvaek rlipdgcavk yipncgpldk cralhs
//
LOCUS       XP_061012107             554 aa            linear   MAM 02-DEC-2023
DEFINITION  ankyrin repeat domain-containing protein 53 [Dama dama].
ACCESSION   XP_061012107
VERSION     XP_061012107.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156124.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 18% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..554
                     /product="ankyrin repeat domain-containing protein 53"
                     /calculated_mol_wt=62297
     Region          <126..325
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          154..185
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(155,159..160,163..165,167..168,172,175,185,187,189,
                     193..194,197..199,205..206,210,213,222,224,226,230..231,
                     234..236,238..239,243,246,255)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          187..222
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          224..255
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..554
                     /gene="ANKRD53"
                     /coded_by="XM_061156124.1:1..1665"
                     /db_xref="GeneID:133065339"
ORIGIN      
        1 mtslrdawav gwgnrlvgdp areaprsgps tttlirerps asarsaswhf skwaaapisk
       61 rrylsgdvhl qlvkagsttr kesavrrhrw arawahahlp sragsssksl aeewdqraig
      121 esyyelfaas lgnlewlrfc lnqhpgeiva ddkgftaihf aaqsgklacl qvlveeykfp
      181 vnlptnngqt plhlvihadn ktvalpcihy likqgaalni qtcngstplh laaregllsc
      241 vkvlvqkgan vhaqdatgck pidyckiwnh rvcarflkda mwkrdkkdfa hemtklkrlr
      301 dqlalmeedy lteyqkehqi lreadfkkwl hrklllqdqs lipsvqrepr appratalsk
      361 tckdgvlwpp ttfhpspear lqqiqqpnlp llmpaptykp ptirrpkvwn lssnparspt
      421 aqigypqgvr lgvhpdprpe rdfrcfvevr snghggvhlr tvagrhvepv prlpfevvir
      481 elypsvrpyr mkvpqgfcsv tmgevprkrh lgdssfwtdt lsmnlretfd eaflaavrah
      541 qglpalpspk splp
//
LOCUS       XP_061012108             263 aa            linear   MAM 02-DEC-2023
DEFINITION  homeobox protein notochord [Dama dama].
ACCESSION   XP_061012108
VERSION     XP_061012108.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156125.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..263
                     /product="homeobox protein notochord"
                     /calculated_mol_wt=28121
     Region          <16..128
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          169..225
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..263
                     /gene="NOTO"
                     /coded_by="XM_061156125.1:1..792"
                     /db_xref="GeneID:133065340"
ORIGIN      
        1 mpspgprgcr plpfsgsgvq pprssrspgp aspalprgsa npspprapgr lessfsveai
       61 larpdpcapt asplpvsaga hgdlwnvpar ppaqalpgac pptwlpagls aglhqpcplp
      121 palrpltshf cglqglnvtg lelvhclglw dpqdwahaqd lqdtersqkr irtmfsleql
      181 eelekvfakq hnivgkkrsq laaqlnlten qvrvwfqnrr vkyqkqqrlk lpaasamaas
      241 sdepssssdt siqredtesg mds
//
LOCUS       XP_061012109             997 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C2orf78 homolog [Dama dama].
ACCESSION   XP_061012109
VERSION     XP_061012109.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156126.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 9% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..997
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..997
                     /product="uncharacterized protein C2orf78 homolog"
                     /calculated_mol_wt=108042
     Region          574..721
                     /region_name="DUF4629"
                     /note="Domain of unknown function (DUF4629); pfam15442"
                     /db_xref="CDD:434721"
     Region          <739..956
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..997
                     /gene="C11H2orf78"
                     /coded_by="XM_061156126.1:1..2994"
                     /db_xref="GeneID:133065341"
ORIGIN      
        1 mqeripevqd srvavckgee atvtatldil twegkgtvsr mplvykragc qdarvaqgtr
       61 gsklwskelq pkaarekvcn qlcvlssllp slktsssiis sslvsavnls sssltmsenf
      121 qnpsvlgtqn slqlslpvvs ntasltgsvc nfsrvsapal ssawllpags stsfqplmgs
      181 aylyqhsstt mlsgvagqsq lstsaasypg ifewdtekks sslgdftvtv idqdtavssm
      241 smpaqydkts evtsmvplyp slsanlvqgt psqipnqghs lsltpqergq vyychqgtlg
      301 pllsgelgpc lqsygsvsha ggrtsaqpem vmvlkeiqpt dilppastsg iyysvsaqpi
      361 tetgfqvmet slgsqlpsqt fclsetsefp rscisrniqi lesnpplelg dismitpvqs
      421 asnllalppv psqeqtdnkn lddiktkfsk pldayqipie nqdpplvple isdihellas
      481 idplsqeeql vsenenlgkn slsfedlgtl engfdsssgf adiatlvedi hlpqffhslk
      541 dldqseapkl ikakdtsavk vnqvqekpnv ikvpsdqprk nkhkasesvs dapkakiqpk
      601 npecllgeev itcnaavgdk apvntvkqsn skaqkaasgr inkakshgqe ktkrtrekkk
      661 aeknkpsgnk vkaeekpsip kmkrkknqpd fsqenfkkpr sclgmhmles vqvfhalgkk
      721 sdkktglnss rvlgnssnpk dpqpspaiks wlntpcegkg pdktqvkaqk pddgaekecl
      781 sparcelppp gkvklvplpf ptldkpqarp vprrpqpvas yrpavacsaw pgstnsaqpa
      841 avnasrpapa slpgpakpvq ttvtnptqpg ltkptwpsvp qsvaprpvpy ktssctslqr
      901 esvpppvtkr qsppkpqtqf llqdfrfqpi pwrkpnvpep vmskpitkeq rpereamkrq
      961 aqlerenaak ytslgkvqyf ierekemeia ryygyam
//
LOCUS       XP_061012110             194 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 182 [Dama dama].
ACCESSION   XP_061012110
VERSION     XP_061012110.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156127.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..194
                     /product="transmembrane protein 182"
                     /calculated_mol_wt=22134
     Region          8..173
                     /region_name="PMP22_Claudin"
                     /note="PMP-22/EMP/MP20/Claudin family; cl21598"
                     /db_xref="CDD:473919"
     CDS             1..194
                     /gene="TMEM182"
                     /coded_by="XM_061156127.1:1..585"
                     /db_xref="GeneID:133065346"
ORIGIN      
        1 melsyyrvti envtfhhegf fwrcwfngiv gendsniwqf wytnqppwkn cthaylspyp
       61 flrgehnsts ydsaviyrgf wavlmllgvv avvtasflii caapftshll ykagggayia
      121 agvlfslvmm lyviwvqava dmesyrhvkm rycsdfspsv lygwsfflap agiffsllag
      181 llfllvgrhi qihh
//
LOCUS       XP_061012111             797 aa            linear   MAM 02-DEC-2023
DEFINITION  sodium/hydrogen exchanger 4 [Dama dama].
ACCESSION   XP_061012111
VERSION     XP_061012111.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156128.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..797
                     /product="sodium/hydrogen exchanger 4"
                     /calculated_mol_wt=89710
     Region          63..621
                     /region_name="b_cpa1"
                     /note="sodium/hydrogen exchanger 3; TIGR00840"
                     /db_xref="CDD:273294"
     CDS             1..797
                     /gene="SLC9A4"
                     /coded_by="XM_061156128.1:1..2394"
                     /db_xref="GeneID:133065347"
ORIGIN      
        1 mgvrvlapfg pwswclllat vyccgasskl nrstdssaqr elnvrfaaas sqpaetisvf
       61 tldydyvqip yevtlwilla slakigfhlh rrlpglmpes cllilvgalv gavifgtdhk
      121 sppvmdssiy flyllppivl esgyfmptrp ffenlgsilw waglgallna fgiglslyli
      181 cqvpafglgd inllqnllfg slissvdpva vlavfeearv neqlymmifg eallndgisv
      241 vlyniliaft kmhkfediep vdilagcarf iivgcggvff gvifgfisaf itrftqnisa
      301 ieplivfmfs ylsylvaetl ylsgilaita cavtmkkyve envsqtsytt ikyfmkmlss
      361 vsetlififm gvstigknhe wnwaficftl vfcqiwrais vfalfyvsnr frtfpfsvkd
      421 qcvifysgvr gagsfslafl lppslfprkk lfvtatlvvi yftvfiqgit vgplvryldv
      481 rktnkkesin eelhtrlmdh lkagvedvcg qwshyqvrdk fkkfdhkylr kilirknlpk
      541 sslvslykkl emkqaiemve sgvlsstafs iphqaqktqe tkrlspedve smrdiltrnm
      601 yqvrqrtlsy nkynlqpqts ekqakeilir rrntfresmk kghslpwgkp agtkniryls
      661 fpyssplsag rdvkvaeftd hdgsdselpp itfnthspae siqerrwtae vipmkslhga
      721 atpssfgyqr sasreerlgr grrailrpkp pfhavdeefe seeegeeeap afgsllslel
      781 rpggdcnlsh spllqrk
//
LOCUS       XP_061012112             550 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA-binding protein RFX8 [Dama dama].
ACCESSION   XP_061012112
VERSION     XP_061012112.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156129.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..550
                     /product="DNA-binding protein RFX8"
                     /calculated_mol_wt=62362
     Region          <1..54
                     /region_name="RFX_DNA_binding"
                     /note="RFX DNA-binding domain; pfam02257"
                     /db_xref="CDD:460512"
     CDS             1..550
                     /gene="RFX8"
                     /coded_by="XM_061156129.1:53..1705"
                     /db_xref="GeneID:133065348"
ORIGIN      
        1 myeiyvetcg qnaqnqvnpa mfgklvrlvf pdlgtrrlgt rgsaryhydg icikrssffy
       61 aqycyllgek rcpsgdivaf ekstnynril qeegagdnhs piktepigsp lsefkrcpfw
      121 eqelakkysy qmvafladey cnccqdilqh vedllmsfwk slqqdavmll slpdvcqllk
      181 cydaqlykgi edillhdfle dvsiqylksv rlfskkfklw llsalegfpa llqiskfkev
      241 tvfvkrlrrk tylsnmaktm rmvlrnsrrv svlktdlcti lhqgvldisq kvlprdlsga
      301 dvleentemk clsslisllg tstdlsvfmn clssnlqefv fqpsrskeef iqlaasfqlr
      361 wnflltavsr amtlchrdsf gswhlfhlll leyvihilqs cieeeeeedd vgslketlpd
      421 cqcpvqpdre phhppdcppa qeceslsadp prvmlrcrgq spsatagssv vvrvpgflvd
      481 tvtgskliqv lledratent iklslplgqe tlitltdgqk lvihisdvsq ssediylres
      541 nadtgdylld
//
LOCUS       XP_061012113             145 aa            linear   MAM 02-DEC-2023
DEFINITION  neuromedin-S [Dama dama].
ACCESSION   XP_061012113
VERSION     XP_061012113.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156130.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..145
                     /product="neuromedin-S"
                     /calculated_mol_wt=16766
     CDS             1..145
                     /gene="NMS"
                     /coded_by="XM_061156130.1:1..438"
                     /db_xref="GeneID:133065349"
ORIGIN      
        1 mkclaqfpsi laiycfcllq ipssgfprpl adasdgldiv kfermaywas lsrqpkdnqd
       61 iykrflfhys rtqepthpvk tgfppvhplm rlaakladrr mktfwrrdsr ataadftkkd
      121 ytatlgrpff lfrprngrnl dfdns
//
LOCUS       XP_061012114             719 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: LON peptidase N-terminal domain and RING
            finger protein 2 [Dama dama].
ACCESSION   XP_061012114
VERSION     XP_061012114.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156131.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 3% of CDS bases
            frameshifts :: corrected 6 indels
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..719
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..719
                     /product="LOW QUALITY PROTEIN: LON peptidase N-terminal
                     domain and RING finger protein 2"
                     /calculated_mol_wt=79246
     Region          102..>136
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Region          158..>257
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          <285..>454
                     /region_name="COG5222"
                     /note="Uncharacterized conserved protein, contains RING
                     Zn-finger [General function prediction only]"
                     /db_xref="CDD:227547"
     Region          411..455
                     /region_name="RING-HC_LONFs_rpt2"
                     /note="second RING finger, HC subclass, found in the LON
                     peptidase N-terminal domain and RING finger protein
                     family; cd16514"
                     /db_xref="CDD:438177"
     Region          518..698
                     /region_name="LON/PUA"
                     /note="Uncharacterized conserved protein, LON_N-like
                     domain, ASCH/PUA-like superfamily [Function unknown];
                     COG2802"
                     /db_xref="CDD:442054"
     CDS             1..719
                     /gene="LONRF2"
                     /coded_by="XM_061156131.1:1..2160"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 7 bases in 4 codons;
                     deleted 2 bases in 2 codons"
                     /db_xref="GeneID:133065350"
ORIGIN      
        1 mrtlgfallt tfpctvrhac tlrrageydt aaelfrsala glaqpdrdlc lrlgxragrl
       61 peclgtlrpd elgeptasla ralgprelre spgrapgeap rdllgfprcr rllhkpvtlp
      121 cgltvcgrca epgpdrppgr rvsvvlsgll ekcfpgxrrl agqarnlqrq rqpeaalagc
      181 hqaldlapgd nsllllqael clsmknceqa lqdagevcqn epllpkghhv kaqalsglgr
      241 sketlkefly clalnpecns vkkeaqkvlc evffpasenv pqnltsstqt tveheikgsm
      301 sesvnsqgpv edggsagrsk npsekpdvfr nssssvlhfi lglhceedqe vlddilptep
      361 stglkrqfpn dxqdahdvna tgkflkkdsl pqrnvnsntg eseelpteva dfgcalcvrl
      421 lfepvtmpcg htfclkcqel cldhalhcpv ckeklsella srnfnttala eelifryfsd
      481 elsdxriyde emtelshltr dvpifacama fptvscllhv fepryrlmir rcmetgtkrf
      541 gmclsaehte iseygcvqev kdvrtfpdss svvdasgisr frvlshrhrd gyntadieyl
      601 edervegped eelgmlpdpv yrqpasrlas lqapteeqsv shfglmppdr epeprsnpig
      661 pawswwmlav lpleqkaqla ilgmislkec llairrilvi itremnswqe linsrerns
//
LOCUS       XP_061012115            2059 aa            linear   MAM 02-DEC-2023
DEFINITION  fer-1-like protein 5 [Dama dama].
ACCESSION   XP_061012115
VERSION     XP_061012115.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156132.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2059
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2059
                     /product="fer-1-like protein 5"
                     /calculated_mol_wt=237735
     Region          5..119
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     Region          164..273
                     /region_name="C2B_Ferlin"
                     /note="C2 domain second repeat in Ferlin; cd04011"
                     /db_xref="CDD:175978"
     Region          273..>300
                     /region_name="FerI"
                     /note="FerI (NUC094) domain; pfam08151"
                     /db_xref="CDD:462377"
     Region          305..468
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     Region          <620..668
                     /region_name="FerA"
                     /note="FerA (NUC095) domain; pfam08165"
                     /db_xref="CDD:462389"
     Region          692..765
                     /region_name="FerB"
                     /note="FerB (NUC096) domain; pfam08150"
                     /db_xref="CDD:462376"
     Region          781..833
                     /region_name="DysFN"
                     /note="Dysferlin domain, N-terminal region; smart00693"
                     /db_xref="CDD:214777"
     Region          1080..1215
                     /region_name="C2D_Ferlin"
                     /note="C2 domain fourth repeat in Ferlin; cd04017"
                     /db_xref="CDD:175984"
     Site            order(1096,1102,1158,1160)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175984"
     Region          1490..1613
                     /region_name="C2E_Ferlin"
                     /note="C2 domain fifth repeat in Ferlin; cd04037"
                     /db_xref="CDD:176002"
     Site            order(1505,1511,1560,1562,1567)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176002"
     Region          1725..1855
                     /region_name="C2F_Ferlin"
                     /note="C2 domain sixth repeat in Ferlin; cd08374"
                     /db_xref="CDD:176020"
     Region          1874..>1960
                     /region_name="Ferlin_C"
                     /note="Ferlin C-terminus; pfam16165"
                     /db_xref="CDD:435183"
     CDS             1..2059
                     /gene="FER1L5"
                     /coded_by="XM_061156132.1:1..6180"
                     /db_xref="GeneID:133065351"
ORIGIN      
        1 mlrlivqsak ispplspppr pcvsvyfrdv krttrevegn hpmwnetliw hlwnhplqkd
       61 sflqitlrdm gsvkkerfig matvllkplv kkprkilfvn dltllnhsmm ptdctitlqa
      121 almtykdmek igdedllait aqevakqklm fpsatvhkal spkpqhfqvr vqvfearqlm
      181 gndikpvvkv viaghqhhsr ikmgnnpffn eiffqnfyea pmkffdeiil iqvmnssvmr
      241 fnaeigrfqt digfiyncpg htllrkwlgl cqpsernsgv rgylkvtica lgvgdqapvd
      301 qrltyraddm dtrifkssvv pismaylqff iycaedlhlk khysvspvle veligeklkt
      361 hvqtqtetpi wnqiltfriq lpclssyikf rvldcpgnrc sdeigtvsls lnqisstgae
      421 iegmysgflp cfgpsfltlr ggkkapfrmk eedpnipniv kdglayrgrv flelithvks
      481 hqeakmkdls ldvisiekhq nrqkyglcvi flsctmmpdf kdliqfevsi ghygnkmdls
      541 ykplvsttqy spaiydgniy yyvpwyntkp vvavtsfwed vgfrmnclnl lqftrdrlka
      601 nldtlksmrn prdpallpqw ekllrelved ckrplpcmts qpkatdldkn rwklrrlllq
      661 elaqkakqap prdmvataeg wlyrlnavlp epqmnlpdvm iwlmsreqrv ayaqvpahsv
      721 lfspdgarhs grfcgktqtl flqypegege kdtlpaqlrv cmwlgnvtds rdlellrqge
      781 vvvyaetyen qakfkdqwgq qflqhcpnfs dvmghkalpk edfkephgwh wegpwtvepq
      841 rrllldtdin ksqvleevye nqrrdatgaw vpaaipntdv ngepvearei vkcpqgwhvk
      901 qtwavelnha vdnegweygv gippsglpqv wnsvektyys rrrrrwarvr yrdhgrlshe
      961 qetlsflqlh hpglaedeag weygvfgskf hlnpqpqsrf rrrcwhrrla pnkvkgiapi
     1021 fllegslstd mkeqakrevd mvsstrrlds lrrvrrappa vtptpnlpfi ycvfnkphyy
     1081 qlfcyiyqar nlmsshvqtf qgpfirlvfl nhsqctqtlk ssaaptwaqt lifqhlllye
     1141 npqdtregpp cvvlelwqrd pqgsetlwgr tmwqpvvwld aqdrilppmr whplvrgled
     1201 eegeilasce liletevlge gqlpmlsvpw kngiyilpks iqptlrkmai emlvwglrnm
     1261 kqvrsprllv ecweeslqte pirdfqtnpn faqsallltl ympteetfal plvlkvvdsq
     1321 dfgqetvvgq anvhslqpyf cdpwaedyvp prpptlsvkk yqellgylce kfwfksgkae
     1381 dendqevdww sklfwatgda prtlkykykd yhtlkvydce leavpafqgl qdfcqtfkly
     1441 qerprlgspv vgelkgqfrv ypfpenpeap kpprqfplwp kkedfpqqcv vrvyivrash
     1501 lqpqdinglc dpyvilklgq tmlgnrdkyq pntldpifgv mfelsctipl ekdleiqlyd
     1561 fdlfspddmi gttvidledr llsgfgarcg lsksycqsgp frwrdqmpps lllehhakrk
     1621 glppplfspe gdsvyyngkk felqsfelkp prahflgskk erlalyllnt qglvpehvet
     1681 rtlysdsqpg idqgkvqmwv difpkklgpp gppvnigprk pnryelrcii wkttlvdpke
     1741 nsndrindiy vkgwlfglek dmqktdvhyr slmgegifnw rfiftldylv aehvcvlsek
     1801 dyiwsldptv tkfparliiq vwdnniistd dflgvleldl sdmplpaphs rlcsvrmlea
     1861 dpkwphflqh khsslfkmkn vagwwpcqvl dggkwrlsgk vkmtleilte kealikaagr
     1921 gqsepnqypt lhpplrthtl fmwirspigr lirvfwrryr fkiiattiil liglllfkfi
     1981 ysapnylamn wikpelrlna piqiytniin apntssanss nlttpqqnlk pttalklkhl
     2041 qghvtrlrdi lpellapqn
//
LOCUS       XP_061012116             379 aa            linear   MAM 02-DEC-2023
DEFINITION  astacin-like metalloendopeptidase [Dama dama].
ACCESSION   XP_061012116
VERSION     XP_061012116.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156133.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 16% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..379
                     /product="astacin-like metalloendopeptidase"
                     /calculated_mol_wt=41425
     Region          96..277
                     /region_name="ZnMc"
                     /note="Zinc-dependent metalloprotease. This super-family
                     of metalloproteases contains two major branches, the
                     astacin-like proteases and the adamalysin/reprolysin-like
                     proteases. Both branches have wide phylogenetic
                     distribution, and contain sub-families, which...; cl00064"
                     /db_xref="CDD:469599"
     Site            order(178..179,182,188)
                     /site_type="active"
                     /db_xref="CDD:238124"
     CDS             1..379
                     /gene="ASTL"
                     /coded_by="XM_061156133.1:1..1140"
                     /db_xref="GeneID:133065354"
ORIGIN      
        1 meglwpwvli lvclpgfilg apsashcaga cgarfsedlt peetqtswdk dipainqgli
       61 peespessfl legdilrpgp frlfsaassk wprnggvvev pfllsgkydk psrqvileaf
      121 aeferstcir fvaysgqrdf isiipmsgcf ssigrsggmq vvslgpsclq rgpgivlhel
      181 mhvlgfwheh sradrdryir vnwneilpgf emnfiksrss nmlvpydyss vmhygrlafs
      241 rrglptitpl wapsvhigqr wnlsssdiar vlrfydcsps ghepsgkglq tpgsgrspsp
      301 gsrsqlqqll qalleesrrs dprgfraedq hgaaaagsee rlraqkppal rnsdvkasah
      361 papsapgflp eakawggls
//
LOCUS       XP_061012117             970 aa            linear   MAM 02-DEC-2023
DEFINITION  prominin-2 [Dama dama].
ACCESSION   XP_061012117
VERSION     XP_061012117.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156134.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 14% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..970
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..970
                     /product="prominin-2"
                     /calculated_mol_wt=106023
     Region          162..943
                     /region_name="Prominin"
                     /note="pfam05478"
                     /db_xref="CDD:461660"
     CDS             1..970
                     /gene="PROM2"
                     /coded_by="XM_061156134.1:1..2913"
                     /db_xref="GeneID:133065355"
ORIGIN      
        1 mglqripsch llmpnfcpsl adrlivsltl tpcpcpapsl arafrllslp lcphphplpp
       61 plkgqsalgh svpdensapr rahcgltgpq kppkesqrll glgrevsrsp nilgtgvtpp
      121 npsrptrnll salpadpmvr apdllaallr lglgvvltlp gagaagcral gpaerlafap
      181 aararwlapr arapgpldsl ygtvrsflsv vqlnpfpael iktllnepas vkvdevlryq
      241 agylvcavia glyllampaa glcfcclrcr rrcggrvkme hktmacergv lmtflllttl
      301 vlligvvtaf vtnqhmheqm gpsaaavpea llslrglvse vpqelqavae qfslpqeqvl
      361 eelngvgssi gkamhsqlks tvyealasvl slgqalqvsv dhlrglnats velqegqdal
      421 apalhghrqr llallrephc qgcagalnks htlelgadfs qvpsvghvlh rlkdvpeanf
      481 ysmvweentt fnalpilaal qtadmvrelk kvvaeqprgl ntmaeafpvw eaasrwsqal
      541 eeveessrpf leevqryery rwaagcvlcs vvllvvvcnl lglnlgiwgl saredpshse
      601 akgeagarfl mvgvgfsfll avplillvfs tflvggnvqt lvcqswesge lyefvdtpgn
      661 lppsmnlsql lglkrnlsil layeqckqga alwtvlqlnd sydlekhldi sqytvklqqe
      721 lqklkvdvqn ldllspaarr dlealqssgl edihypgflv eiqkpvvnsd veklaqeleg
      781 lsqtqgnatl gqklqeearg lqhlhqekvl pqqnlvakln lsvqalassa phlqseiigv
      841 ldrvtylkge lptrathilr nesecflmre msyfsqytaw vreevtqria tcqplsgald
      901 ngrvilcdmv adpwnafwfc lgwctfflip sivfavktsk yfrpirkrls stsseetqlf
      961 hiprvtslkl
//
LOCUS       XP_061012118             391 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 514 [Dama dama].
ACCESSION   XP_061012118
VERSION     XP_061012118.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156135.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 42% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..391
                     /product="zinc finger protein 514"
                     /calculated_mol_wt=42860
     Region          75..135
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     CDS             1..391
                     /gene="ZNF514"
                     /coded_by="XM_061156135.1:669..1844"
                     /db_xref="GeneID:133065356"
ORIGIN      
        1 mpgvirlapr slspgriagp ppndrdldlv kelapamdsr asvlpsqepa lpperclgdk
       61 gtaslflkar pqdlmtfedv aveftwwewg rldpaqkdly revmlenfkn laslgfpvsk
      121 pymicqleeg eepcilerei stgvhsdwer rpqakeamls qglskeellq rasvekhird
      181 elrssklkat cgwddqekyt inviqhsdrl qgevtlreln qgrnlanamn svtgvgyerl
      241 fyssvstipr fdlhldpapc ssvplisvwe eftasasfre simsavrala aleirrvprg
      301 dgaqprpprr pahahpsgqp rpprrpahap pprgpaqapp lgpnaktplg lsaarpdssh
      361 plpvwtpphp glrcsaapgp wglgprsaav g
//
LOCUS       XP_061012119             160 aa            linear   MAM 02-DEC-2023
DEFINITION  myelin and lymphocyte protein-like [Dama dama].
ACCESSION   XP_061012119
VERSION     XP_061012119.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156136.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..160
                     /product="myelin and lymphocyte protein-like"
                     /calculated_mol_wt=17664
     Region          19..144
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     CDS             1..160
                     /gene="LOC133065357"
                     /coded_by="XM_061156136.1:1..483"
                     /db_xref="GeneID:133065357"
ORIGIN      
        1 matgtasggs rlprgsavft tfpdllfvfe fvsgglvwif illaqvpipl vqgwvlfvsv
       61 scfivttlll clyivgahkn wsfwitldta yhclaalfyf sasaletlvt iglqddiykh
      121 ysenisavvf siivtllyvv havfslirck vsysrnrehs
//
LOCUS       XP_061012120             305 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4A47-like [Dama dama].
ACCESSION   XP_061012120
VERSION     XP_061012120.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156137.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..305
                     /product="olfactory receptor 4A47-like"
                     /calculated_mol_wt=34112
     Region          23..289
                     /region_name="7tmA_OR4A-like"
                     /note="olfactory receptor 4A and related proteins, member
                     of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15939"
                     /db_xref="CDD:320605"
     Region          24..50
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320605"
     Region          57..83
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320605"
     Site            order(79,82..83,95..100,102..103,106,151,153..157,193,
                     196..198,200..202,204..205,249,252..253,255..256,259,
                     263..264,266..268,271,274..275)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320605"
     Region          95..125
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320605"
     Region          138..159
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320605"
     Region          193..223
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320605"
     Region          229..259
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320605"
     Region          264..289
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320605"
     CDS             1..305
                     /gene="LOC133065361"
                     /coded_by="XM_061156137.1:1..918"
                     /db_xref="GeneID:133065361"
ORIGIN      
        1 mekrnnvtef vllglsqsnq gqkilfvlff viytvtmvgn llivltvvfs ptlgapmyil
       61 lgylsfmdav yattvnpntf idllyekkti sfqacmiqlf tehffggaei lllvvmaydr
      121 yvaickplhy vtvmsqrvcv lllllarvgg llhaivnihf vyslpfcgpn vidhfmcdmy
      181 pllklactdt hiiavivvan dgiicvvlft llltscgvil hslknisqeg rrkalstcgs
      241 hitvvllffv pciflyvrpp silpidksla vfytiitpmv npliytlrns eiqnamgklw
      301 irkrt
//
LOCUS       XP_061012121             266 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4C3D-like [Dama dama].
ACCESSION   XP_061012121
VERSION     XP_061012121.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156138.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..266
                     /product="olfactory receptor 4C3D-like"
                     /calculated_mol_wt=29816
     Region          26..265
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          28..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          61..83
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          99..121
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          144..160
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          197..220
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          238..260
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..266
                     /gene="LOC133065362"
                     /coded_by="XM_061156138.1:1..801"
                     /db_xref="GeneID:133065362"
ORIGIN      
        1 melimspnnv tefilleltq nphlqkifli vflliflftv lanlliviai sfsstlsapm
       61 yffltylall dasftsvstp nmitdllyqr rtiswggclt qlflehflsg sevivltfma
      121 ydrymaickp lhyttimrqg lckllvvvaw iegilyanvq ilfmddmtfc gsnvtdhfrc
      181 dfssllklaf sdtymlgmvv atnsggmcll iffpllisyi iilsslkshg sdgrckalst
      241 ygshfiavvl fgsfcyyvns gpiqtr
//
LOCUS       XP_061012122             233 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4C3D-like [Dama dama].
ACCESSION   XP_061012122
VERSION     XP_061012122.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156139.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..233
                     /product="olfactory receptor 4C3D-like"
                     /calculated_mol_wt=25866
     Region          39..>233
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          61..83
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          99..121
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          144..160
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          197..220
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..233
                     /gene="LOC133065363"
                     /coded_by="XM_061156139.1:1..702"
                     /db_xref="GeneID:133065363"
ORIGIN      
        1 mdglrppnnv tefvllgltq nphvqkilfi vflfiflftv lanpliviti slsptlsapm
       61 yflltylall dasftsvtip kwivdlfhqr riiswrgcmt qvflehflaa sevivltvma
      121 ydrygaickp lyyttitrqg lclllvvvaw iggilhvtvq ilflmvltfc gpnvidhfvc
      181 dffsllelac sdtytpgivv aaksggmcll iffmllssyi vilsslkshg seg
//
LOCUS       XP_061012123             309 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4C6-like [Dama dama].
ACCESSION   XP_061012123
VERSION     XP_061012123.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156140.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..309
                     /product="olfactory receptor 4C6-like"
                     /calculated_mol_wt=34238
     Region          23..289
                     /region_name="7tmA_OR4A-like"
                     /note="olfactory receptor 4A and related proteins, member
                     of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15939"
                     /db_xref="CDD:320605"
     Region          24..50
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320605"
     Region          57..83
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320605"
     Site            order(79,82..83,95..100,102..103,106,151,153..157,193,
                     196..198,200..202,204..205,249,252..253,255..256,259,
                     263..264,266..268,271,274..275)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320605"
     Region          95..125
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320605"
     Region          138..159
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320605"
     Region          193..223
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320605"
     Region          229..259
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320605"
     Region          264..289
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320605"
     CDS             1..309
                     /gene="LOC133065364"
                     /coded_by="XM_061156140.1:1..930"
                     /db_xref="GeneID:133065364"
ORIGIN      
        1 mgnpnnvtef illgiaknpe lrkilsavfl imyvstvlgn llivvtvvts qslrspmyff
       61 ltsfsltdvt yssviapkmi vdslsestvi slkacmaqlf idhffggvgi illivmaydr
      121 yvaickplhy mtimrprvcc lllggswvga fthatvqllf myqipfcgpn iidhfmcdlf
      181 pllklacmdt cilgllviln sgvmcvtiff iliasyvvil cslkscsskg rrkalstcgs
      241 hltvvimffv pciflyvrpv vtypidkama vfftivapml npliytlrnv evknamrklw
      301 mqqgalcgh
//
LOCUS       XP_061012124             192 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4C46-like [Dama dama].
ACCESSION   XP_061012124
VERSION     XP_061012124.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156141.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..192
                     /product="olfactory receptor 4C46-like"
                     /calculated_mol_wt=21462
     Region          <1..171
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          26..42
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          77..100
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          118..140
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          147..171
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..192
                     /gene="LOC133065370"
                     /coded_by="XM_061156141.1:1..579"
                     /db_xref="GeneID:133065370"
ORIGIN      
        1 msydhyvaic kplhytsims rqvchllmgv swvagfphgv iqiififrlp fcgpniidhf
       61 mcdknpllnl actntlglfv avnsgflcll nfllligsyv vilhslrsqs learqkalsi
      121 cvshttvvvl ffvpcifvyl rpatallidk aaavfytmvt pmlnlliytl rstqmkntir
      181 klcsrkvisd es
//
LOCUS       XP_061012125             308 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4C46-like [Dama dama].
ACCESSION   XP_061012125
VERSION     XP_061012125.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156142.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..308
                     /product="olfactory receptor 4C46-like"
                     /calculated_mol_wt=34353
     Region          23..288
                     /region_name="7tmA_OR4A-like"
                     /note="olfactory receptor 4A and related proteins, member
                     of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15939"
                     /db_xref="CDD:320605"
     Region          24..50
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320605"
     Region          57..83
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320605"
     Site            order(79,82..83,95..100,102..103,106,150,152..156,192,
                     195..197,199..201,203..204,248,251..252,254..255,258,
                     262..263,265..267,270,273..274)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320605"
     Region          95..125
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320605"
     Region          138..158
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320605"
     Region          192..222
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320605"
     Region          228..258
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320605"
     Region          263..288
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320605"
     CDS             1..308
                     /gene="LOC133065374"
                     /coded_by="XM_061156142.1:1..927"
                     /db_xref="GeneID:133065374"
ORIGIN      
        1 mekrnnvtef illgltqnpk mqkvifavfl vvylvsmvgn vltlvtitts sllgspmyff
       61 lahlsfidac yscvstpkli idslyekkts pfngcmtqif gehffggvdv illtvmaydr
      121 yvaickplhy ttimnrrlsg llvgvawvgl lhgtiqilfi fslpfcgpnv idhfmcdlnp
      181 lldlactdth tlglfvaans gficllnfll lmgsyvvilr slrtyslear qkalstcmsh
      241 itavifffap cifvymrpaa tlptdkavav fytmitpmln plistlrndq mknaiwklfs
      301 rkaildvi
//
LOCUS       XP_061012126            2337 aa            linear   MAM 02-DEC-2023
DEFINITION  voltage-dependent N-type calcium channel subunit alpha-1B isoform
            X1 [Dama dama].
ACCESSION   XP_061012126
VERSION     XP_061012126.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156143.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2337
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2337
                     /product="voltage-dependent N-type calcium channel subunit
                     alpha-1B isoform X1"
                     /calculated_mol_wt=261329
     Region          94..367
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          482..721
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          <821..>990
                     /region_name="PHA03169"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:223003"
     Region          1146..1376
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          1466..1715
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          1724..1777
                     /region_name="GPHH"
                     /note="Voltage-dependent L-type calcium channel,
                     IQ-associated; pfam16905"
                     /db_xref="CDD:465306"
     Region          1788..1865
                     /region_name="Ca_chan_IQ"
                     /note="Voltage gated calcium channel IQ domain; pfam08763"
                     /db_xref="CDD:462591"
     Region          1979..>2254
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..2337
                     /gene="CACNA1B"
                     /coded_by="XM_061156143.1:1..7014"
                     /db_xref="GeneID:133065377"
ORIGIN      
        1 mvrfgdelgg ryggpggger argggaggag gpgpgglqpg qrvlykqsia qrartmalyn
       61 pipvkqncft vnrslfvfse dnvvrkyakr itewppfeym ilatiianci vlaleqhlpd
      121 gdktpmserl ddtepyfigi fcfeagikii algfvfhkgs ylrngwnvmd fvvvltgila
      181 tagtdfdlrt lravrvlrpl klvsgipslq vvlksimkam vpllqiglll ffailmfaii
      241 glefymgkfh kacfpnstda dpvgdfpcgr eaparlcegd tecreywagp nfgitnfdni
      301 lfailtvfqc itmegwtdil yntndaagnt wnwlyflpli iigsffmlnl vlgvlsgefa
      361 kerervenrr aflklrrqqq ierelngyle wifkaeevml aeedknaeek spldavlkra
      421 atkksrndli haeegedrfa dlcavgspfa raslksgkte sssyfrrkek mfrffirrlv
      481 kaqsfywvvl cvvalntlcv amvhyhqpqr lttalyfaef vflglfltem slkmyglgpr
      541 syfrssfncf dfgvivgsif evvwaaikpg tsfgisvlra lrllrifkvt kywsslrnlv
      601 vsllnsmksi isllfllflf ivvfallgmq lfggqfnfqd etpttnfdtf paailtvfqi
      661 ltgedwnavm yhgiesqggv skgmfssvyf ivltlfgnyt llnvflaiav dnlanaqelt
      721 kdeeemeeaa nqklalqkak evaevspmsa anisiaarqq nsakarsvwe qrasqlrlqn
      781 lrascealys emdpeerlrf atsrhlrpdm kthldrplvv epgrdgargp aggkvrpegg
      841 eagegtdppr rhhrhrdrdr dkaaalvgep dradapkaeg gdpgareera rprrsrskea
      901 agprearser grglgpdggr rhhrrgspee aaereprrhr ahrhapepsr egapgskger
      961 rarhrggara gpreaesgee parrhrarhk appgheeaek eaeaedrdrd keprnhqpre
     1021 shcdleatvv igvgpvhalp stclekveeq pedadnqrnv trmgsqpsdl sttvhipvtl
     1081 sgppgettvv psgnvdlesq aegkkevead dvmrsgprpi vpyssmfcls ptnllrrfch
     1141 yivtmryfem vilvvialss ialaaedpvq tdsprnnvlk ymdyiftgvf tfemvikmid
     1201 lglllhpgay frdlwnildf ivvsgalvaf afsgskgkdi stikslrvlr vlrplktikr
     1261 lpklkavfdc vvnslknvln ilivymlfmf ifaviavqlf kgkffyctde skelerdcrg
     1321 qyldyekeev eaqprqwkky dfhydnvlwa lltlftvstg egwpmvlkhs vdatyeeqgp
     1381 spgyrmelsi fyvvyfvvfp fffvnifval iiitfqeqgd kvmsecslek neracidfai
     1441 sakpltrymp qnkqsfqykt wtfvvsppfe yfimamialn tvvlmmkfyd apyeyelmlk
     1501 clnivftsmf smecvlkiia fgvlnyfrda wnvfdfvtvl gsitdilvte iaetnnfinl
     1561 sflrlfraar likllrqgyt irillwtfvq sfkalpyvcl liamlffiya iigmqvfgni
     1621 aldddtsinr hnnfrtflqa lmllfrsatg eawheimlsc lssracdela natecgsdfa
     1681 yfyfvsfifl csflmlnlfv avimdnfeyl trdssilgph hldefirvwa eydpaacgri
     1741 syndmfemlk hmspplglgk kcparvaykr lvrmnmpisn ddmtvhftst lmalirtale
     1801 iklapagtkq hqcdaelrke issvwanlpq ktldllvpph kpdemtvgkv yaalmifdfy
     1861 kqnkttrdqi hqapgglaqm gpvslfhplk atleqtqpav lrgarvflrq kssaslsngg
     1921 avqtqeggik esvswgtqrt qevpcevrtp lerghsteip vvqtgepavd vqmqsmalrg
     1981 pdgepqpgle sqgraasmpr laaetqpppd aspmkrsist lapqrphvah lcnaaldrap
     2041 vsqaaphhhh rchrrrdrkq kslekgpsls adtdgapyst agpgpppppg dgaagcrrer
     2101 rqergrsqer rqpsssssek qrfyscdrfg grepqqpkps lsshptspta gqepgpprqg
     2161 sgsvngspll stsgastpgr ggrrqlpqtp ltprpsityk tansspvhfa gaqtslpafs
     2221 pgrlsrglse hnallqrdpl sqplaptsri gsdpylgqrl dseaaartqp edtltfeeav
     2281 atnsgrssrt syvssltsqs hplrrvpngy hctlglssgg ggrgrhsyhh pdqdhwc
//
LOCUS       XP_061012127            2241 aa            linear   MAM 02-DEC-2023
DEFINITION  voltage-dependent N-type calcium channel subunit alpha-1B isoform
            X2 [Dama dama].
ACCESSION   XP_061012127
VERSION     XP_061012127.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156144.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2241
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2241
                     /product="voltage-dependent N-type calcium channel subunit
                     alpha-1B isoform X2"
                     /calculated_mol_wt=251239
     Region          94..367
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          482..721
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          <821..>990
                     /region_name="PHA03169"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:223003"
     Region          1146..1376
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          1466..1715
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          1724..1777
                     /region_name="GPHH"
                     /note="Voltage-dependent L-type calcium channel,
                     IQ-associated; pfam16905"
                     /db_xref="CDD:465306"
     Region          1788..1865
                     /region_name="Ca_chan_IQ"
                     /note="Voltage gated calcium channel IQ domain; pfam08763"
                     /db_xref="CDD:462591"
     Region          1979..>2238
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..2241
                     /gene="CACNA1B"
                     /coded_by="XM_061156144.1:1..6726"
                     /db_xref="GeneID:133065377"
ORIGIN      
        1 mvrfgdelgg ryggpggger argggaggag gpgpgglqpg qrvlykqsia qrartmalyn
       61 pipvkqncft vnrslfvfse dnvvrkyakr itewppfeym ilatiianci vlaleqhlpd
      121 gdktpmserl ddtepyfigi fcfeagikii algfvfhkgs ylrngwnvmd fvvvltgila
      181 tagtdfdlrt lravrvlrpl klvsgipslq vvlksimkam vpllqiglll ffailmfaii
      241 glefymgkfh kacfpnstda dpvgdfpcgr eaparlcegd tecreywagp nfgitnfdni
      301 lfailtvfqc itmegwtdil yntndaagnt wnwlyflpli iigsffmlnl vlgvlsgefa
      361 kerervenrr aflklrrqqq ierelngyle wifkaeevml aeedknaeek spldavlkra
      421 atkksrndli haeegedrfa dlcavgspfa raslksgkte sssyfrrkek mfrffirrlv
      481 kaqsfywvvl cvvalntlcv amvhyhqpqr lttalyfaef vflglfltem slkmyglgpr
      541 syfrssfncf dfgvivgsif evvwaaikpg tsfgisvlra lrllrifkvt kywsslrnlv
      601 vsllnsmksi isllfllflf ivvfallgmq lfggqfnfqd etpttnfdtf paailtvfqi
      661 ltgedwnavm yhgiesqggv skgmfssvyf ivltlfgnyt llnvflaiav dnlanaqelt
      721 kdeeemeeaa nqklalqkak evaevspmsa anisiaarqq nsakarsvwe qrasqlrlqn
      781 lrascealys emdpeerlrf atsrhlrpdm kthldrplvv epgrdgargp aggkvrpegg
      841 eagegtdppr rhhrhrdrdr dkaaalvgep dradapkaeg gdpgareera rprrsrskea
      901 agprearser grglgpdggr rhhrrgspee aaereprrhr ahrhapepsr egapgskger
      961 rarhrggara gpreaesgee parrhrarhk appgheeaek eaeaedrdrd keprnhqpre
     1021 shcdleatvv igvgpvhalp stclekveeq pedadnqrnv trmgsqpsdl sttvhipvtl
     1081 sgppgettvv psgnvdlesq aegkkevead dvmrsgprpi vpyssmfcls ptnllrrfch
     1141 yivtmryfem vilvvialss ialaaedpvq tdsprnnvlk ymdyiftgvf tfemvikmid
     1201 lglllhpgay frdlwnildf ivvsgalvaf afsgskgkdi stikslrvlr vlrplktikr
     1261 lpklkavfdc vvnslknvln ilivymlfmf ifaviavqlf kgkffyctde skelerdcrg
     1321 qyldyekeev eaqprqwkky dfhydnvlwa lltlftvstg egwpmvlkhs vdatyeeqgp
     1381 spgyrmelsi fyvvyfvvfp fffvnifval iiitfqeqgd kvmsecslek neracidfai
     1441 sakpltrymp qnkqsfqykt wtfvvsppfe yfimamialn tvvlmmkfyd apyeyelmlk
     1501 clnivftsmf smecvlkiia fgvlnyfrda wnvfdfvtvl gsitdilvte iaetnnfinl
     1561 sflrlfraar likllrqgyt irillwtfvq sfkalpyvcl liamlffiya iigmqvfgni
     1621 aldddtsinr hnnfrtflqa lmllfrsatg eawheimlsc lssracdela natecgsdfa
     1681 yfyfvsfifl csflmlnlfv avimdnfeyl trdssilgph hldefirvwa eydpaacgri
     1741 syndmfemlk hmspplglgk kcparvaykr lvrmnmpisn ddmtvhftst lmalirtale
     1801 iklapagtkq hqcdaelrke issvwanlpq ktldllvpph kpdemtvgkv yaalmifdfy
     1861 kqnkttrdqi hqapgglaqm gpvslfhplk atleqtqpav lrgarvflrq kssaslsngg
     1921 avqtqeggik esvswgtqrt qevpcevrtp lerghsteip vvqtgepavd vqmqsmalrg
     1981 pdgepqpgle sqgraasmpr laaetqpppd aspmkrsist lapqrphvah lcnaaldrap
     2041 vsqaaphhhh rchrrrdrkq kslekgpsls adtdgapyst agpgpppppg dgaagcrrer
     2101 rqergrsqer rqpsssssek qrfyscdrfg grepqqpkps lsshptspta gqepgpprqv
     2161 sslpfppagl avafqnttpc sretpsaslw ppplglaltl twgsvwtarl rpapslrtrs
     2221 psrrpwpptr aappglptcp p
//
LOCUS       XP_061012128             125 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein eL31-like [Dama dama].
ACCESSION   XP_061012128
VERSION     XP_061012128.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156145.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..125
                     /product="large ribosomal subunit protein eL31-like"
                     /calculated_mol_wt=14296
     Region          19..100
                     /region_name="Ribosomal_L31e"
                     /note="Ribosomal protein L31e; pfam01198"
                     /db_xref="CDD:460108"
     CDS             1..125
                     /gene="LOC133065378"
                     /coded_by="XM_061156145.1:42..419"
                     /db_xref="GeneID:133065378"
ORIGIN      
        1 mapakkggkk kkgrsainev vtreytinih krihgvgfkk rapralkeir kfamkemgtp
       61 dvrintrlnk avwakgirnv pyrirvrlsr krnededspn klytlvtyvp vttlknlqtv
      121 nvden
//
LOCUS       XP_061012129             114 aa            linear   MAM 02-DEC-2023
DEFINITION  notch-regulated ankyrin repeat-containing protein [Dama dama].
ACCESSION   XP_061012129
VERSION     XP_061012129.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156146.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..114
                     /product="notch-regulated ankyrin repeat-containing
                     protein"
                     /calculated_mol_wt=12333
     Site            order(20,23..25,27..28,32,35,48,50,52,56..57,60..62,
                     64..65,69,72,81,83,85,89..90,93..95,97..98,102)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          <21..>106
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          50..81
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..114
                     /gene="NRARP"
                     /coded_by="XM_061156146.1:75..419"
                     /db_xref="GeneID:133065379"
ORIGIN      
        1 msqaelstcs apqtqrifqe avrkgntqel qsllqnmtnc efnvnsfgpe gqtalhqsvi
       61 dgnlelvkll vkfgadirla nrdgwsalhi aafgghqdiv lylitkakys gggr
//
LOCUS       XP_061012130             304 aa            linear   MAM 02-DEC-2023
DEFINITION  protein STPG3 [Dama dama].
ACCESSION   XP_061012130
VERSION     XP_061012130.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156147.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..304
                     /product="protein STPG3"
                     /calculated_mol_wt=33133
     CDS             1..304
                     /gene="STPG3"
                     /coded_by="XM_061156147.1:1..915"
                     /db_xref="GeneID:133065380"
ORIGIN      
        1 mnfdqkavkf lasfhinggr hwthgslkqk ppvtsqlnaa vllsglepgl gasweemwpp
       61 avqelqvglr tqtsprqepl trnlrellle qrppimtdlh vpgptkyqvp dasvressph
      121 phfsigrrhp thegggrraw qtvwfqsesp ftqkadfnre qkwpspadyq lpsppacpaf
      181 sfrgrpasrp peararqgvl qawgtgppaq pllqappptg dktgpgpsty nilpgcrlkg
      241 pcppafsmgr spllaswvgs sctpgpaayn vedcyrsqlp sapgvviqgv rrpkrhdtgp
      301 fcal
//
LOCUS       XP_061012131             602 aa            linear   MAM 02-DEC-2023
DEFINITION  sodium-dependent phosphate transport protein 2C [Dama dama].
ACCESSION   XP_061012131
VERSION     XP_061012131.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156148.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..602
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..602
                     /product="sodium-dependent phosphate transport protein 2C"
                     /calculated_mol_wt=63302
     Region          80..566
                     /region_name="2a58"
                     /note="Phosphate:Na+ Symporter (PNaS) Family; TIGR01013"
                     /db_xref="CDD:162157"
     CDS             1..602
                     /gene="SLC34A3"
                     /coded_by="XM_061156148.1:333..2141"
                     /db_xref="GeneID:133065381"
ORIGIN      
        1 mphpltggla ppapldtvgl veqrlgnagi sgsasiledr dmdpwalpql kdtgqswkel
       61 stagralrvl vgflkacgll gglylficsl dilssafqll sskvtgdifk dnvvlsnpla
      121 glvigvlvtv lvqssstsss ivvsmvaskl ltvrasvpii mgvnvgtsft stlvsmaqsg
      181 drdefrrafg gsavhgifnw ltalvllple saaaplerls vltlgaaslq pgghapdilk
      241 vltrplthli vqldadvltg satgnttnps likrwcgtre qttagnsshc gaaaggpcpg
      301 kngsaseepl pcrhlfagta ltdlavglil laasllvlcs clvlivklln stlrgrvaqa
      361 vrtvinadfp rpfgwlsgyl ailvgasltf vlqsssvfts aivpligvgv islerayplf
      421 lgsntgtttt allaalasps drllsavqva lihfffnlvg illwyivpil rlpiplakhf
      481 gnltasyrwv avaylllcfl llplaafgls lagaavlaav ggplvvlvll valvtvlqrh
      541 rpawlprrlr swawlppwlr slepwdrmvr cccpcqacsp pqaaskeahc yenpqvlasq
      601 ql
//
LOCUS       XP_061012132             403 aa            linear   MAM 02-DEC-2023
DEFINITION  LIM/homeobox protein Lhx3 isoform X1 [Dama dama].
ACCESSION   XP_061012132
VERSION     XP_061012132.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156149.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..403
                     /product="LIM/homeobox protein Lhx3 isoform X1"
                     /calculated_mol_wt=43819
     Region          33..87
                     /region_name="LIM1_Lhx3b"
                     /note="The first LIM domain of Lhx3b; cd09467"
                     /db_xref="CDD:188851"
     Site            order(36,39,57,60,63,66,83,86)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188851"
     Region          95..150
                     /region_name="LIM2_Lhx3_Lhx4"
                     /note="The second LIM domain of Lhx3-Lhx4 family; cd09376"
                     /db_xref="CDD:188762"
     Site            order(95,98,117,120,123,126,146,149)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188762"
     Site            order(107,132)
                     /site_type="other"
                     /note="Isl binding site"
                     /db_xref="CDD:188762"
     Region          163..219
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          <260..>376
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..403
                     /gene="LHX3"
                     /coded_by="XM_061156149.1:1..1212"
                     /db_xref="GeneID:133065383"
ORIGIN      
        1 meargelapg resaggdlll allarredlr reiplcagcd qhildrfilk aldrhwhskc
       61 lkcsdchapl aercfsrges vyckddffkr fgtkcaacql gipptqvvrr aqdfvyhlhc
      121 facvvckrql atgdefylme dsrlvckady etakqreaea takrprttit akqletlksa
      181 yntspkparh vreqlssetg ldmrvvqvwf qnrrakekrl kkdagrqrwg qyfrnmkrar
      241 ggsksdkdsv qeegqdsdae vsftddpama dmgpasglyg slgepapalg rpsgapgsfp
      301 lehgglagpe qyrelrpgsp ygvppspaal qslpgpqpll sslvypdagl glvttgapgg
      361 pppmrvlagn gpssdlstgs sggypdfpas paswldevdh aqf
//
LOCUS       XP_061012133             401 aa            linear   MAM 02-DEC-2023
DEFINITION  LIM/homeobox protein Lhx3 isoform X2 [Dama dama].
ACCESSION   XP_061012133
VERSION     XP_061012133.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156150.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..401
                     /product="LIM/homeobox protein Lhx3 isoform X2"
                     /calculated_mol_wt=43576
     Region          31..85
                     /region_name="LIM1_Lhx3b"
                     /note="The first LIM domain of Lhx3b; cd09467"
                     /db_xref="CDD:188851"
     Site            order(34,37,55,58,61,64,81,84)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188851"
     Region          93..148
                     /region_name="LIM2_Lhx3_Lhx4"
                     /note="The second LIM domain of Lhx3-Lhx4 family; cd09376"
                     /db_xref="CDD:188762"
     Site            order(93,96,115,118,121,124,144,147)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188762"
     Site            order(105,130)
                     /site_type="other"
                     /note="Isl binding site"
                     /db_xref="CDD:188762"
     Region          161..217
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          <258..>374
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..401
                     /gene="LHX3"
                     /coded_by="XM_061156150.1:1..1206"
                     /db_xref="GeneID:133065383"
ORIGIN      
        1 mlletdlegd rdrprapatt glctfggtre iplcagcdqh ildrfilkal drhwhskclk
       61 csdchaplae rcfsrgesvy ckddffkrfg tkcaacqlgi pptqvvrraq dfvyhlhcfa
      121 cvvckrqlat gdefylmeds rlvckadyet akqreaeata krprttitak qletlksayn
      181 tspkparhvr eqlssetgld mrvvqvwfqn rrakekrlkk dagrqrwgqy frnmkrargg
      241 sksdkdsvqe egqdsdaevs ftddpamadm gpasglygsl gepapalgrp sgapgsfple
      301 hgglagpeqy relrpgspyg vppspaalqs lpgpqpllss lvypdaglgl vttgapggpp
      361 pmrvlagngp ssdlstgssg gypdfpaspa swldevdhaq f
//
LOCUS       XP_061012134             309 aa            linear   MAM 02-DEC-2023
DEFINITION  putative glycosyltransferase 6 domain-containing protein 1 [Dama
            dama].
ACCESSION   XP_061012134
VERSION     XP_061012134.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156151.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..309
                     /product="putative glycosyltransferase 6 domain-containing
                     protein 1"
                     /calculated_mol_wt=36383
     Region          43..306
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
     Site            order(83,85,115,174,176)
                     /site_type="active"
                     /db_xref="CDD:132997"
     CDS             1..309
                     /gene="GLT6D1"
                     /coded_by="XM_061156151.1:1..930"
                     /db_xref="GeneID:133065384"
ORIGIN      
        1 mnckrkmlll ilglslfllf dhysrknqee elqlsdwfdp rkrpdvittt swlapvvweg
       61 tfsrealekh yrkqnlttgl avfatgrlad qylelflrsa nkyfltgyrv ifylmvdtlv
      121 rlpqirwgpl rqfkvfivte dswwanadlv rmkslakhii wdiqgevdfl fsmtvtqifq
      181 nnvgvevlge svaqlhawwy fknrasfpye rrpksaacip fgqgdfyydg afvggtplev
      241 lnlveeylng iihdlrlrln styekhlnry fflrkpakll speynwdadf ypppqvqyvk
      301 vaqqskrrh
//
LOCUS       XP_061012135             179 aa            linear   MAM 02-DEC-2023
DEFINITION  epididymal-specific lipocalin-9 [Dama dama].
ACCESSION   XP_061012135
VERSION     XP_061012135.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156152.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..179
                     /product="epididymal-specific lipocalin-9"
                     /calculated_mol_wt=20154
     Region          23..176
                     /region_name="lipocalin_FABP"
                     /note="lipocalin/cytosolic fatty acid-binding protein
                     family; cl10502"
                     /db_xref="CDD:471979"
     Site            order(33,37,61,63,71,73,75,86,88,90,99,101,107,109,111,
                     120,122,124,135,137,139)
                     /site_type="other"
                     /note="ligand binding cavity [chemical binding]"
                     /db_xref="CDD:381182"
     CDS             1..179
                     /gene="LCN9"
                     /coded_by="XM_061156152.1:377..916"
                     /db_xref="GeneID:133065385"
ORIGIN      
        1 mallllslgl glvcsqdfnp qrivqtnydi skvsgtwysi smaadnkkri eeggdlrifi
       61 ksirivedgg lklsfhfmlh aectdvavvc sktgksgeyt inylgenslr ileadyqryv
      121 ilhmrnfrng tatqvlalyg rfpelkysfl drfnkacksh glgpekiipf snqnpcytr
//
LOCUS       XP_061012136             180 aa            linear   MAM 02-DEC-2023
DEFINITION  beta-lactoglobulin [Dama dama].
ACCESSION   XP_061012136
VERSION     XP_061012136.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156153.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..180
                     /product="beta-lactoglobulin"
                     /calculated_mol_wt=19907
     Region          21..180
                     /region_name="lipocalin_beta-LG-like"
                     /note="beta-lactoglobulin and similar proteins; cd19416"
                     /db_xref="CDD:381191"
     Site            order(33,37,56,59,62,64,72,74,76,78,87,89,91,100,102,
                     104..106,108,110,112,121,123,125,136,138,140)
                     /site_type="other"
                     /note="ligand binding cavity [chemical binding]"
                     /db_xref="CDD:381191"
     CDS             1..180
                     /gene="LOC133065386"
                     /coded_by="XM_061156153.1:55..597"
                     /db_xref="GeneID:133065386"
ORIGIN      
        1 mkclllalgl alacgaqaii vtqtmkdldi qkvagtwysl amaasdisll daqsaplrvy
       61 veelkptpkg dleillqkwe ngecaqkkii aekteipavf kidalnenkv lvldtdykky
      121 llfcmdnsae peqslacqcl vrtpevdnea mekfdkalka lpvhirlsfn ptqleeqchv
//
LOCUS       XP_061012137             600 aa            linear   MAM 02-DEC-2023
DEFINITION  bile salt-activated lipase [Dama dama].
ACCESSION   XP_061012137
VERSION     XP_061012137.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156154.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..600
                     /product="bile salt-activated lipase"
                     /calculated_mol_wt=65529
     Region          25..543
                     /region_name="COesterase"
                     /note="Carboxylesterase family; pfam00135"
                     /db_xref="CDD:395084"
     Site            order(126..128,213..215,218,367,371..372,408,457,460)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:238191"
     Site            order(214,340,456)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238191"
     CDS             1..600
                     /gene="CEL"
                     /coded_by="XM_061156154.1:43..1845"
                     /db_xref="GeneID:133065387"
ORIGIN      
        1 mgrwellvlg lacclvvasa aklgsvyteg gfvegvnkkl slfgdsvdif kgipfaaapk
       61 alekaerhpg wqgtlkakdf kkrclqatlt qdstygnedc lylniwvpqg rkevshdlpv
      121 miwiyggafl mgsghganfl snylydgeei atrgnvivvt fnyrvgplgf lstgdanlpg
      181 nyglwdqhma iawvkrniea fggdpdnitl fgesaggasv slqtlsphnk glikraisqs
      241 gvglcpwaiq enplfwakki aekvgcpvdd tskmagclki tdpraltlay klplgtteyp
      301 klhylsfvpv idgdfipddp inlyanaadi dyiagtndmd ghlfvgldvp ainsntrdvt
      361 eedfyklvsg ltvtkglrga natyeaytep waqdssqetr kktmvdletd ilflmptkma
      421 vaqhksnaks antytylfsh psrmplvypk wmgadhaddl qyvfgkpfat plgyraqdrt
      481 vskamiaywt nfartgdpnt ghssvptnwd pytledgnyl einkqmdsns mklhlrtnyl
      541 qfwtqtyqal ptvtgegasl vppvdnseas pvppadnsea atepsagdse vaqmpvvigf
//
LOCUS       XP_061012138             416 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein Gfi-1b isoform X1 [Dama dama].
ACCESSION   XP_061012138
VERSION     XP_061012138.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156155.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..416
                     /product="zinc finger protein Gfi-1b isoform X1"
                     /calculated_mol_wt=46144
     Region          180..201
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(180,183,196,201)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          209..229
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          308..328
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(313,315,317,319..320,323..324,327,341,343,347..348,
                     351..352,355,369,371,373,375..376,379..380,383)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          316..>393
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          336..356
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(336,339,352,356)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          348..373
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          364..384
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          392..409
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..416
                     /gene="GFI1B"
                     /coded_by="XM_061156155.1:74..1324"
                     /db_xref="GeneID:133065388"
ORIGIN      
        1 mppvrvpgvg hlltmprsfl vkskkahtyh qpraledell wppalgpvar dqvpstipvl
       61 sslfpnqrld wtdlkrepql eleqspmtrm ssgpegpavt srpqdgdsps sdsppfykps
      121 fswdalassy ghsyrqaptt mqsaflersv slygsplvps aeppldfslh yspgmdayhc
      181 ikcskvfstp hglevharrs hsgtrpfacd vcgktfghsv sleqhthvhs qpclmprsll
      241 qdpipgkapd talrattwvd lkaqeekqag mgipagsspp pslaapgrea ppdppgprfl
      301 rqersfecrm cgkafkrsst lsthllihsd trpypcqfcg krfhqksdmk khtyihtgek
      361 phkcqvcgka fsqssnlith srkhtgfkpf scelcakgfq rkvdlrrhre sqhnlk
//
LOCUS       XP_061012139             402 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein Gfi-1b isoform X2 [Dama dama].
ACCESSION   XP_061012139
VERSION     XP_061012139.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156156.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..402
                     /product="zinc finger protein Gfi-1b isoform X2"
                     /calculated_mol_wt=44689
     Region          166..187
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(166,169,182,187)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          195..215
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          294..314
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(299,301,303,305..306,309..310,313,327,329,333..334,
                     337..338,341,355,357,359,361..362,365..366,369)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          302..>379
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          322..342
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(322,325,338,342)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          334..359
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          350..370
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          378..395
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..402
                     /gene="GFI1B"
                     /coded_by="XM_061156156.1:826..2034"
                     /db_xref="GeneID:133065388"
ORIGIN      
        1 mprsflvksk kahtyhqpra ledellwppa lgpvardqvp stipvlsslf pnqrldwtdl
       61 krepqleleq spmtrmssgp egpavtsrpq dgdspssdsp pfykpsfswd alassyghsy
      121 rqapttmqsa flersvslyg splvpsaepp ldfslhyspg mdayhcikcs kvfstphgle
      181 vharrshsgt rpfacdvcgk tfghsvsleq hthvhsqpcl mprsllqdpi pgkapdtalr
      241 attwvdlkaq eekqagmgip agsspppsla apgreappdp pgprflrqer sfecrmcgka
      301 fkrsstlsth llihsdtrpy pcqfcgkrfh qksdmkkhty ihtgekphkc qvcgkafsqs
      361 snlithsrkh tgfkpfscel cakgfqrkvd lrrhresqhn lk
//
LOCUS       XP_061012140             345 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein Gfi-1b isoform X3 [Dama dama].
ACCESSION   XP_061012140
VERSION     XP_061012140.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156157.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..345
                     /product="zinc finger protein Gfi-1b isoform X3"
                     /calculated_mol_wt=38711
     Region          180..201
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <206..254
                     /region_name="PHA00733"
                     /note="hypothetical protein"
                     /db_xref="CDD:177301"
     Region          209..229
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          237..257
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(242,244,246,248..249,252..253,256,270,272,276..277,
                     280..281,284,298,300,302,304..305,308..309,312)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          245..>322
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          265..285
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(265,268,281,285)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          277..302
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          293..313
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          321..338
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..345
                     /gene="GFI1B"
                     /coded_by="XM_061156157.1:74..1111"
                     /db_xref="GeneID:133065388"
ORIGIN      
        1 mppvrvpgvg hlltmprsfl vkskkahtyh qpraledell wppalgpvar dqvpstipvl
       61 sslfpnqrld wtdlkrepql eleqspmtrm ssgpegpavt srpqdgdsps sdsppfykps
      121 fswdalassy ghsyrqaptt mqsaflersv slygsplvps aeppldfslh yspgmdayhc
      181 ikcskvfstp hglevharrs hsgtrpfacd vcgktfghsv sleqhthvhs qersfecrmc
      241 gkafkrsstl sthllihsdt rpypcqfcgk rfhqksdmkk htyihtgekp hkcqvcgkaf
      301 sqssnliths rkhtgfkpfs celcakgfqr kvdlrrhres qhnlk
//
LOCUS       XP_061012141             240 aa            linear   MAM 02-DEC-2023
DEFINITION  sperm acrosome-associated protein 9 isoform X1 [Dama dama].
ACCESSION   XP_061012141
VERSION     XP_061012141.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156158.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..240
                     /product="sperm acrosome-associated protein 9 isoform X1"
                     /calculated_mol_wt=25889
     Region          <65..180
                     /region_name="SPACA9"
                     /note="Sperm acrosome-associated protein 9; pfam15120"
                     /db_xref="CDD:434475"
     CDS             1..240
                     /gene="SPACA9"
                     /coded_by="XM_061156158.1:546..1268"
                     /db_xref="GeneID:133065390"
ORIGIN      
        1 mrtekgdpeg giqgglsemg pvtvyrpvdp tashigglsp vtreggrtra gargpwaltp
       61 rgplqvqsym ehhcsnstdr rillmfldic selsklcqhf ealhagtpvt nnllekcktl
      121 vsqsndlssl rakyphdvvn hlscdearnh yggvvslipi ildlmkewva hseklprkal
      181 hqvsepqaat latahapqas gtqpqlrkqn cgqltqnvpk pggkdqgssk ppwrppggkl
//
LOCUS       XP_061012142             224 aa            linear   MAM 02-DEC-2023
DEFINITION  sperm acrosome-associated protein 9 isoform X2 [Dama dama].
ACCESSION   XP_061012142
VERSION     XP_061012142.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156159.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..224
                     /product="sperm acrosome-associated protein 9 isoform X2"
                     /calculated_mol_wt=24987
     Region          3..164
                     /region_name="SPACA9"
                     /note="Sperm acrosome-associated protein 9; pfam15120"
                     /db_xref="CDD:434475"
     CDS             1..224
                     /gene="SPACA9"
                     /coded_by="XM_061156159.1:1879..2553"
                     /db_xref="GeneID:133065390"
ORIGIN      
        1 mmnevkeslr nveqkykifq qqqftfiaal ehcrenahdk irpissigqv qsymehhcsn
       61 stdrrillmf ldicselskl cqhfealhag tpvtnnllek cktlvsqsnd lsslrakyph
      121 dvvnhlscde arnhyggvvs lipiildlmk ewvahseklp rkalhqvsep qaatlataha
      181 pqasgtqpql rkqncgqltq nvpkpggkdq gsskppwrpp ggkl
//
LOCUS       XP_061012143             224 aa            linear   MAM 02-DEC-2023
DEFINITION  sperm acrosome-associated protein 9 isoform X2 [Dama dama].
ACCESSION   XP_061012143
VERSION     XP_061012143.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156160.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..224
                     /product="sperm acrosome-associated protein 9 isoform X2"
                     /calculated_mol_wt=24987
     Region          3..164
                     /region_name="SPACA9"
                     /note="Sperm acrosome-associated protein 9; pfam15120"
                     /db_xref="CDD:434475"
     CDS             1..224
                     /gene="SPACA9"
                     /coded_by="XM_061156160.1:320..994"
                     /db_xref="GeneID:133065390"
ORIGIN      
        1 mmnevkeslr nveqkykifq qqqftfiaal ehcrenahdk irpissigqv qsymehhcsn
       61 stdrrillmf ldicselskl cqhfealhag tpvtnnllek cktlvsqsnd lsslrakyph
      121 dvvnhlscde arnhyggvvs lipiildlmk ewvahseklp rkalhqvsep qaatlataha
      181 pqasgtqpql rkqncgqltq nvpkpggkdq gsskppwrpp ggkl
//
LOCUS       XP_061012144             479 aa            linear   MAM 02-DEC-2023
DEFINITION  adenylate kinase 8 isoform X1 [Dama dama].
ACCESSION   XP_061012144
VERSION     XP_061012144.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156161.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..479
                     /product="adenylate kinase 8 isoform X1"
                     /calculated_mol_wt=54678
     Region          9..53
                     /region_name="DD_AK8"
                     /note="dimerization/docking (D/D) domain found in
                     adenylate kinase isoenzyme 8 (AK8) and similar proteins;
                     cd22979"
                     /db_xref="CDD:438548"
     Region          59..249
                     /region_name="ADK"
                     /note="Adenylate kinase (ADK) catalyzes the reversible
                     phosphoryl transfer from adenosine triphosphates (ATP) to
                     adenosine monophosphates (AMP) and to yield adenosine
                     diphosphates (ADP). This enzyme is required for the
                     biosynthesis of ADP and is essential for...; cd01428"
                     /db_xref="CDD:238713"
     Site            order(88,113,139..140,142..143,147)
                     /site_type="other"
                     /note="AMP-binding site [chemical binding]"
                     /db_xref="CDD:238713"
     Site            order(139,143,178,219,222)
                     /site_type="other"
                     /note="ATP-AMP (Ap5A)-binding site [chemical binding]"
                     /db_xref="CDD:238713"
     Region          270..462
                     /region_name="ADK"
                     /note="Adenylate kinase (ADK) catalyzes the reversible
                     phosphoryl transfer from adenosine triphosphates (ATP) to
                     adenosine monophosphates (AMP) and to yield adenosine
                     diphosphates (ADP). This enzyme is required for the
                     biosynthesis of ADP and is essential for...; cd01428"
                     /db_xref="CDD:238713"
     Site            order(299,304,327,353..354,356..357,361)
                     /site_type="other"
                     /note="AMP-binding site [chemical binding]"
                     /db_xref="CDD:238713"
     Site            order(304,353,357,392,432,436)
                     /site_type="other"
                     /note="ATP-AMP (Ap5A)-binding site [chemical binding]"
                     /db_xref="CDD:238713"
     CDS             1..479
                     /gene="AK8"
                     /coded_by="XM_061156161.1:66..1505"
                     /db_xref="GeneID:133065391"
ORIGIN      
        1 mdattaphri ppqmpqygea nhvfelmqnm leqllihqpk dpipfmidhl qrdndyvpki
       61 iilgppasgk ttiamwlakh lstnllsves liakeysplv adarmhyqkf kmvpnmllir
      121 lmqerlkeed cirrgwildg ipetreqalt iqtlgisprh vialsapdtv liernlgkri
      181 dpqtgeiyht tfdwppesei qnrlmmpagi segetarkll eyhrnivril psypkilkvi
      241 nadqpcvdvf yqaltyvqts hrsnapftpr vllcgpvgsg kslqaallaq kyglinvccg
      301 qllkeavadk skygemiqpf fekeiavpdn iimkvlkqrl dqqdcvergw vlhgfprdld
      361 qahlmdslgy kpnrvfflnv pldsvierlt lrrtdpvtge ryhlmykppp tievqarllq
      421 npkeseeqik lkmdlfyrns aeleqfygea itlngdqdpy tvfeyiesgi inplpkkvp
//
LOCUS       XP_061012145             456 aa            linear   MAM 02-DEC-2023
DEFINITION  adenylate kinase 8 isoform X2 [Dama dama].
ACCESSION   XP_061012145
VERSION     XP_061012145.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156162.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..456
                     /product="adenylate kinase 8 isoform X2"
                     /calculated_mol_wt=51808
     Region          9..53
                     /region_name="DD_AK8"
                     /note="dimerization/docking (D/D) domain found in
                     adenylate kinase isoenzyme 8 (AK8) and similar proteins;
                     cd22979"
                     /db_xref="CDD:438548"
     Region          61..>227
                     /region_name="PLN02842"
                     /note="nucleotide kinase"
                     /db_xref="CDD:178435"
     Region          247..439
                     /region_name="ADK"
                     /note="Adenylate kinase (ADK) catalyzes the reversible
                     phosphoryl transfer from adenosine triphosphates (ATP) to
                     adenosine monophosphates (AMP) and to yield adenosine
                     diphosphates (ADP). This enzyme is required for the
                     biosynthesis of ADP and is essential for...; cd01428"
                     /db_xref="CDD:238713"
     Site            order(276,281,304,330..331,333..334,338)
                     /site_type="other"
                     /note="AMP-binding site [chemical binding]"
                     /db_xref="CDD:238713"
     Site            order(281,330,334,369,409,413)
                     /site_type="other"
                     /note="ATP-AMP (Ap5A)-binding site [chemical binding]"
                     /db_xref="CDD:238713"
     CDS             1..456
                     /gene="AK8"
                     /coded_by="XM_061156162.1:66..1436"
                     /db_xref="GeneID:133065391"
ORIGIN      
        1 mdattaphri ppqmpqygea nhvfelmqnm leqllihqpk dpipfmidhl qrdndyvpki
       61 iilgppasgk ttiamwlakh lstnllsves liakeysplv adarmhyqkf kgwildgipe
      121 treqaltiqt lgisprhvia lsapdtvlie rnlgkridpq tgeiyhttfd wppeseiqnr
      181 lmmpagiseg etarklleyh rnivrilpsy pkilkvinad qpcvdvfyqa ltyvqtshrs
      241 napftprvll cgpvgsgksl qaallaqkyg linvccgqll keavadksky gemiqpffek
      301 eiavpdniim kvlkqrldqq dcvergwvlh gfprdldqah lmdslgykpn rvfflnvpld
      361 svierltlrr tdpvtgeryh lmykppptie vqarllqnpk eseeqiklkm dlfyrnsael
      421 eqfygeaitl ngdqdpytvf eyiesgiinp lpkkvp
//
LOCUS       XP_061012146             450 aa            linear   MAM 02-DEC-2023
DEFINITION  adenylate kinase 8 isoform X3 [Dama dama].
ACCESSION   XP_061012146
VERSION     XP_061012146.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156163.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..450
                     /product="adenylate kinase 8 isoform X3"
                     /calculated_mol_wt=51371
     Region          <1..24
                     /region_name="DD_AK8"
                     /note="dimerization/docking (D/D) domain found in
                     adenylate kinase isoenzyme 8 (AK8) and similar proteins;
                     cd22979"
                     /db_xref="CDD:438548"
     Region          30..220
                     /region_name="ADK"
                     /note="Adenylate kinase (ADK) catalyzes the reversible
                     phosphoryl transfer from adenosine triphosphates (ATP) to
                     adenosine monophosphates (AMP) and to yield adenosine
                     diphosphates (ADP). This enzyme is required for the
                     biosynthesis of ADP and is essential for...; cd01428"
                     /db_xref="CDD:238713"
     Site            order(59,84,110..111,113..114,118)
                     /site_type="other"
                     /note="AMP-binding site [chemical binding]"
                     /db_xref="CDD:238713"
     Site            order(110,114,149,190,193)
                     /site_type="other"
                     /note="ATP-AMP (Ap5A)-binding site [chemical binding]"
                     /db_xref="CDD:238713"
     Region          241..433
                     /region_name="ADK"
                     /note="Adenylate kinase (ADK) catalyzes the reversible
                     phosphoryl transfer from adenosine triphosphates (ATP) to
                     adenosine monophosphates (AMP) and to yield adenosine
                     diphosphates (ADP). This enzyme is required for the
                     biosynthesis of ADP and is essential for...; cd01428"
                     /db_xref="CDD:238713"
     Site            order(270,275,298,324..325,327..328,332)
                     /site_type="other"
                     /note="AMP-binding site [chemical binding]"
                     /db_xref="CDD:238713"
     Site            order(275,324,328,363,403,407)
                     /site_type="other"
                     /note="ATP-AMP (Ap5A)-binding site [chemical binding]"
                     /db_xref="CDD:238713"
     CDS             1..450
                     /gene="AK8"
                     /coded_by="XM_061156163.1:120..1472"
                     /db_xref="GeneID:133065391"
ORIGIN      
        1 mleqllihqp kdpipfmidh lqrdndyvpk iiilgppasg kttiamwlak hlstnllsve
       61 sliakeyspl vadarmhyqk fkmvpnmlli rlmqerlkee dcirrgwild gipetreqal
      121 tiqtlgispr hvialsapdt vliernlgkr idpqtgeiyh ttfdwppese iqnrlmmpag
      181 isegetarkl leyhrnivri lpsypkilkv inadqpcvdv fyqaltyvqt shrsnapftp
      241 rvllcgpvgs gkslqaalla qkyglinvcc gqllkeavad kskygemiqp ffekeiavpd
      301 niimkvlkqr ldqqdcverg wvlhgfprdl dqahlmdslg ykpnrvffln vpldsvierl
      361 tlrrtdpvtg eryhlmykpp ptievqarll qnpkeseeqi klkmdlfyrn saeleqfyge
      421 aitlngdqdp ytvfeyiesg iinplpkkvp
//
LOCUS       XP_061012147             347 aa            linear   MAM 02-DEC-2023
DEFINITION  adenylate kinase 8 isoform X4 [Dama dama].
ACCESSION   XP_061012147
VERSION     XP_061012147.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156164.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..347
                     /product="adenylate kinase 8 isoform X4"
                     /calculated_mol_wt=39398
     Region          2..>118
                     /region_name="PLN02842"
                     /note="nucleotide kinase"
                     /db_xref="CDD:178435"
     Region          138..330
                     /region_name="ADK"
                     /note="Adenylate kinase (ADK) catalyzes the reversible
                     phosphoryl transfer from adenosine triphosphates (ATP) to
                     adenosine monophosphates (AMP) and to yield adenosine
                     diphosphates (ADP). This enzyme is required for the
                     biosynthesis of ADP and is essential for...; cd01428"
                     /db_xref="CDD:238713"
     Site            order(167,172,195,221..222,224..225,229)
                     /site_type="other"
                     /note="AMP-binding site [chemical binding]"
                     /db_xref="CDD:238713"
     Site            order(172,221,225,260,300,304)
                     /site_type="other"
                     /note="ATP-AMP (Ap5A)-binding site [chemical binding]"
                     /db_xref="CDD:238713"
     CDS             1..347
                     /gene="AK8"
                     /coded_by="XM_061156164.1:41..1084"
                     /db_xref="GeneID:133065391"
ORIGIN      
        1 mkgwildgip etreqaltiq tlgisprhvi alsapdtvli ernlgkridp qtgeiyhttf
       61 dwppeseiqn rlmmpagise getarklley hrnivrilps ypkilkvina dqpcvdvfyq
      121 altyvqtshr snapftprvl lcgpvgsgks lqaallaqky glinvccgql lkeavadksk
      181 ygemiqpffe keiavpdnii mkvlkqrldq qdcvergwvl hgfprdldqa hlmdslgykp
      241 nrvfflnvpl dsvierltlr rtdpvtgery hlmykpppti evqarllqnp keseeqiklk
      301 mdlfyrnsae leqfygeait lngdqdpytv feyiesgiin plpkkvp
//
LOCUS       XP_061012148             327 aa            linear   MAM 02-DEC-2023
DEFINITION  barH-like 1 homeobox protein [Dama dama].
ACCESSION   XP_061012148
VERSION     XP_061012148.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156165.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..327
                     /product="barH-like 1 homeobox protein"
                     /calculated_mol_wt=34885
     Region          179..235
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..327
                     /gene="BARHL1"
                     /coded_by="XM_061156165.1:1..984"
                     /db_xref="GeneID:133065394"
ORIGIN      
        1 megsngfgid silshragsp alpkgdpllg dcrsplelsp rsesssdcss paspgrdcle
       61 tgaprpggas gpgldshlqp gqlsapaqsr tvtssflird iladckplaa capysssgqp
      121 aapdpggrla akagedfrdk ldksgsnass dseykvkeeg dreisssrds ppvrlkkprk
      181 artaftdhql aqlersferq kylsvqdrme laaslnltdt qvktwyqnrr tkwkrqtavg
      241 lellaeagny salqrmfpsp yfypqslvsn ldpgaalyly rgpsapppal qrplvprili
      301 hglqgasepp pplpplagvl praaqpr
//
LOCUS       XP_061012149             284 aa            linear   MAM 02-DEC-2023
DEFINITION  cilia- and flagella-associated protein 77 [Dama dama].
ACCESSION   XP_061012149
VERSION     XP_061012149.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156166.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..284
                     /product="cilia- and flagella-associated protein 77"
                     /calculated_mol_wt=32709
     Region          54..204
                     /region_name="CFAP77"
                     /note="Cilia- and flagella-associated protein 77;
                     pfam14825"
                     /db_xref="CDD:464337"
     CDS             1..284
                     /gene="CFAP77"
                     /coded_by="XM_061156166.1:39..893"
                     /db_xref="GeneID:133065395"
ORIGIN      
        1 mpeagnscqd ltrwkkkkpp vrrtvsqicp pprrpltvad irpgmenerl gvvrdsmfqn
       61 plivkaelgk prerscslpg infnyglyir gldggvpeai ghwnvykqqp tcpheltrny
      121 iamnrgavka glvtarenlh yrqlndiris dqddrrlkke ppslppnmtf girarpstpf
      181 fdllqhryqq lwvqeqkatq kaiklekkqk vilgklyetr ssqlrkykpp vrldalwhmp
      241 hfqkvgphla tfpteadrqr afkahreeca vrqgtlrmgn ythp
//
LOCUS       XP_061012150             239 aa            linear   MAM 02-DEC-2023
DEFINITION  proline rich transmembrane protein 1B [Dama dama].
ACCESSION   XP_061012150
VERSION     XP_061012150.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156167.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..239
                     /product="proline rich transmembrane protein 1B"
                     /calculated_mol_wt=24561
     Region          162..231
                     /region_name="CD225"
                     /note="Interferon-induced transmembrane protein;
                     pfam04505"
                     /db_xref="CDD:461336"
     CDS             1..239
                     /gene="PRRT1B"
                     /coded_by="XM_061156167.1:89..808"
                     /db_xref="GeneID:133065396"
ORIGIN      
        1 mdagadakgg gspavpedpv rpglpqlprr pqlleedqpp seeaaaadgg daaapegppa
       61 vaagealqmp kaaaggvpni gfvgepppya ppdpkaehll ypppfpppvl fppapaapal
      121 ypppaplfpa paaqplfatf pvynspvagv papapaehrp lpkdymmesv latlfccllt
      181 gliaivyshe traalargdl aqaqeasrka rslvlfsllf gvfvstswvi yvvvalylp
//
LOCUS       XP_061012151             461 aa            linear   MAM 02-DEC-2023
DEFINITION  fibrinogen C domain-containing protein 1 [Dama dama].
ACCESSION   XP_061012151
VERSION     XP_061012151.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156168.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..461
                     /product="fibrinogen C domain-containing protein 1"
                     /calculated_mol_wt=50298
     Region          137..>224
                     /region_name="Crescentin"
                     /note="Crescentin protein; pfam19220"
                     /db_xref="CDD:437057"
     Region          241..457
                     /region_name="FReD"
                     /note="Fibrinogen-related domains (FReDs); C terminal
                     globular domain of fibrinogen. Fibrinogen is involved in
                     blood clotting, being activated by thrombin to assemble
                     into fibrin clots. The N-termini of 2 times 3 chains come
                     together to form a globular...; cd00087"
                     /db_xref="CDD:238040"
     Site            365
                     /site_type="other"
                     /note="gamma-gamma dimer interface [polypeptide binding]"
                     /db_xref="CDD:238040"
     Site            order(393,395,397)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238040"
     Site            order(401,404..405,414..415)
                     /site_type="active"
                     /note="polymerization pocket [active]"
                     /db_xref="CDD:238040"
     CDS             1..461
                     /gene="FIBCD1"
                     /coded_by="XM_061156168.1:1..1386"
                     /db_xref="GeneID:133065397"
ORIGIN      
        1 mvndrwktmg gasqledrpr dkpqrpgcgy vlgtvllsla vllavavtga vlllnhahvp
       61 gtapppvvst gpagansalv tvdradssrl silidprcpd ladgfarleg aqasvlqals
      121 qrqaeprlpg eqeqelldtl adqlprllar aselqaecag lrkghgalgq elsalqseqg
      181 rliqllsesq ghmahlvnsv sdvldalqrd ralgrphvka dlqrapargs rprgcangsr
      241 prdcldvlls gqqedgvysv fpthdpagfq vycdmrtdgg gwtvfqrred gsvnffrgwe
      301 ayrdgfgklt gehwlglkri halttqaaye lhvdledfdn gtayahygsf gvglfsvdpe
      361 edgypltvad ysgtagdsll khsgmkfttk drdsdhsenn caafyrgaww yrnchtsnln
      421 gqylrgahas yadgvewssw tgwqyslkfs emkirpvred r
//
LOCUS       XP_061012152             135 aa            linear   MAM 02-DEC-2023
DEFINITION  orexigenic neuropeptide QRFP [Dama dama].
ACCESSION   XP_061012152
VERSION     XP_061012152.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156169.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..135
                     /product="orexigenic neuropeptide QRFP"
                     /calculated_mol_wt=14416
     Region          5..134
                     /region_name="RFamide_26RFa"
                     /note="Orexigenic neuropeptide Qrfp/P518; pfam11109"
                     /db_xref="CDD:431659"
     CDS             1..135
                     /gene="QRFP"
                     /coded_by="XM_061156169.1:1..408"
                     /db_xref="GeneID:133065398"
ORIGIN      
        1 mrspyslpyl lflplgacfp vldteepvda vggtgremsw tdpagghpfp wapppgwpra
       61 phprallvta kelwaagrar agfklrlrrq ddgseatgll lgeaekaggl lgtlaeelng
      121 ysrkkggfsf rfgrg
//
LOCUS       XP_061012153             362 aa            linear   MAM 02-DEC-2023
DEFINITION  PR domain zinc finger protein 12 [Dama dama].
ACCESSION   XP_061012153
VERSION     XP_061012153.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156170.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..362
                     /product="PR domain zinc finger protein 12"
                     /calculated_mol_wt=39935
     Region          84..213
                     /region_name="PR-SET_PRDM12"
                     /note="PR-SET domain found in PR domain zinc finger
                     protein 12 (PRDM12) and similar proteins; cd19196"
                     /db_xref="CDD:380973"
     Site            order(95,98..100,117,131..132,134..138,148,162..166,168,
                     177..178,202..203)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380973"
     Site            order(95,98..100,134..135,162..166,168,202)
                     /site_type="other"
                     /note="putative SAM binding site"
                     /db_xref="CDD:380973"
     Region          244..265
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          245..265
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(250,252,254,256..257,260..261,264,278,280,284..285,
                     288..289,292,306,308,310,312..313,316..317)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          257..282
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          273..293
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(273,276,289,293)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          286..310
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          301..319
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..362
                     /gene="PRDM12"
                     /coded_by="XM_061156170.1:1..1089"
                     /db_xref="GeneID:133065399"
ORIGIN      
        1 mmgsvlpaea lvlktglkap glalaevits dilhsflygr wrnvlgeqlf edkshhaspk
       61 taftaevlaq sfsgevqkls slvlpaevii aqssipgegl gifsktwika gtemgpftgr
      121 viapehvdic knnnlmwevf nedgtvryfi dasqedhrsw mtyikcarne qeqnlevvqi
      181 gtsifykaie mippdqellv wygnshntfl gipgvpglee eqkknkhedf hpadsaagta
      241 grmrcvichr gfnsrsnlrs hmrihtldkp fvcrfcnrrf sqsstlrnhv rlhtgerpyk
      301 cqvcqsaysq laglrahqks arhrppsaal qthspalpap hahapalaaa aaaahhlpam
      361 vl
//
LOCUS       XP_061012154             405 aa            linear   MAM 02-DEC-2023
DEFINITION  immediate early response gene 5-like protein [Dama dama].
ACCESSION   XP_061012154
VERSION     XP_061012154.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156171.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..405
                     /product="immediate early response gene 5-like protein"
                     /calculated_mol_wt=42020
     Region          1..405
                     /region_name="IER"
                     /note="Immediate early response protein (IER); pfam05760"
                     /db_xref="CDD:461732"
     CDS             1..405
                     /gene="IER5L"
                     /coded_by="XM_061156171.1:207..1424"
                     /db_xref="GeneID:133065402"
ORIGIN      
        1 mecaldaqsl isislrkihs srtqrggikl hknllvsyvl rnarqlylse ryaelyrrqq
       61 qqqqqqqpph hqhqhlayaa pgmpasaadf gplqlggggd aearepvarh qlhqlhqlhq
      121 lhlqqqlhqh paprgcaaaa aaagapagga galselpgca alqpphgaph rgqpleplqp
      181 gpaplppppp paalcprdpr asaacsapsa ppgaapqaaa aasppaspap asspgfyrga
      241 ypapsdfgvh cssqttvldl dthvvttven gylhqdccas ahcpccgqga pgpglasatg
      301 ckrkyypgqe eeddddddag dlgaeppggv pfapckrarf edfcpdsspd asnisnlisi
      361 fgsgfsglvs rqpdsseqpp plngqlcakq alaslgawtr aivaf
//
LOCUS       XP_061012155             199 aa            linear   MAM 02-DEC-2023
DEFINITION  neutrophil gelatinase-associated lipocalin [Dama dama].
ACCESSION   XP_061012155
VERSION     XP_061012155.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156172.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..199
                     /product="neutrophil gelatinase-associated lipocalin"
                     /calculated_mol_wt=22724
     Region          24..196
                     /region_name="lipocalin_2-like"
                     /note="lipocalin 2 and similar proteins; cd19457"
                     /db_xref="CDD:381232"
     Site            order(47,51,53,60..61,72,74,76,84,86,88,90..92,99,101,103,
                     112,114,126,128,130,139,141,143,145,152..154,156,158)
                     /site_type="other"
                     /note="ligand binding cavity [chemical binding]"
                     /db_xref="CDD:381232"
     CDS             1..199
                     /gene="LCN2"
                     /coded_by="XM_061156172.1:42..641"
                     /db_xref="GeneID:133065403"
ORIGIN      
        1 msvallwlgf tllgalhtqa qsstprllra pplskiplqp nfqadqfqgk wyvvgvagna
       61 ikkeeqdqfk mytsnyelke dgsynvtstl lrdegcdywi rtfvpssrpg qftlgniksy
      121 pgirsytvrv vntdynqfai vffkkvqkkq gyfkttlygr tkeltpevke nfinfakslr
      181 ltddhivftv pidrciddq
//
LOCUS       XP_061012156              68 aa            linear   MAM 02-DEC-2023
DEFINITION  guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5
            [Dama dama].
ACCESSION   XP_061012156
VERSION     XP_061012156.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156173.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..68
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..68
                     /product="guanine nucleotide-binding protein
                     G(I)/G(S)/G(O) subunit gamma-5"
                     /calculated_mol_wt=7187
     Region          7..63
                     /region_name="GGL"
                     /note="G protein gamma subunit-like motifs, the
                     alpha-helical G-gamma chain dimerizes with the G-beta
                     propeller subunit as part of the heterotrimeric G-protein
                     complex; involved in signal transduction via
                     G-protein-coupled receptors; cd00068"
                     /db_xref="CDD:238024"
     Site            order(7,10,14,17,21,26,28,31..32,35..36,39,48..49,59)
                     /site_type="other"
                     /note="beta subunit binding site [polypeptide binding]"
                     /db_xref="CDD:238024"
     CDS             1..68
                     /gene="LOC133065404"
                     /coded_by="XM_061156173.1:68..274"
                     /db_xref="GeneID:133065404"
ORIGIN      
        1 msgsssvaam kkvvqqlrle aglnrvkvsq aaadlkqfcl qnaqhdpllt gvssstnpfr
       61 pqkvcsfl
//
LOCUS       XP_061012157             396 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphatidylinositol 4-phosphate 5-kinase-like protein 1 [Dama
            dama].
ACCESSION   XP_061012157
VERSION     XP_061012157.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156174.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..396
                     /product="phosphatidylinositol 4-phosphate 5-kinase-like
                     protein 1"
                     /calculated_mol_wt=44589
     Region          52..394
                     /region_name="PIPKc_PIP5KL1"
                     /note="Phosphatidylinositol phosphate kinase (PIPK)
                     catalytic domain found in phosphatidylinositol 4-phosphate
                     5-kinase-like protein 1 (PIP5KL1) and similar proteins;
                     cd17304"
                     /db_xref="CDD:340441"
     Site            order(144,153,155,206..209,221,243,285,349..350)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340441"
     CDS             1..396
                     /gene="PIP5KL1"
                     /coded_by="XM_061156174.1:1..1191"
                     /db_xref="GeneID:133065405"
ORIGIN      
        1 maapspgpre ilapspeagr raaasssghr gllwrlrdkq crlglfeigp ghelhqvmcl
       61 mqaglwaatq vsmdhpptgl pteedfsevl tqvhegfelg tlagpafarl rrslglaeed
      121 yqaalgpgrp ylqflstsks kasfflshdq rfflktlrsr evqallahlp ryvhhlqrhp
      181 hsllarllgv hslrvargkk kyfivmqsvf ypagrisery dikgcevsrw vepapegsll
      241 vlvlkdlnfq gktinlgpqr swflrqmeld taflrelnvl dysllmafqr lhedergpgs
      301 slifrtarsi rgaqsaeesg aqnrrllpda pnalhivdgp ehryflglvd lttvyglrkr
      361 leqlwktlry pgrtfstvsp acyarrlcqw aeahte
//
LOCUS       XP_061012158             321 aa            linear   MAM 02-DEC-2023
DEFINITION  prosalusin isoform X1 [Dama dama].
ACCESSION   XP_061012158
VERSION     XP_061012158.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156175.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..321
                     /product="prosalusin isoform X1"
                     /calculated_mol_wt=35946
     Region          42..160
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            93..100
                     /site_type="other"
                     /note="Walker A motif"
                     /db_xref="CDD:99707"
     Site            order(94..101,161,199)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:99707"
     Site            157..162
                     /site_type="other"
                     /note="Walker B motif"
                     /db_xref="CDD:99707"
     CDS             1..321
                     /gene="TOR2A"
                     /coded_by="XM_061156175.1:68..1033"
                     /db_xref="GeneID:133065406"
ORIGIN      
        1 maaatsscrp wgslvgliwl vsaaaaswdl nslrcnfgsf cecdfrpdlq glecdlaqhl
       61 agqhlarslv vkalkaflqd papakplvls lhgwtgtgks yvssllahyl frdglrsphv
      121 hhfspvihfp hpshmerykk dlkswvqgnl tacsrslflf demdklapgl ievlrpflgs
      181 swvvygtnyr kaififisnt ggeqinqvvl eawrsrrere eiglqelgpv isqavldnph
      241 hgfwrsgime ehlldvlvpf lplqrhhvrh cvlnelaqlg leprdevvqa vldsttffpe
      301 deqlfssngc ktvasritff l
//
LOCUS       XP_061012159             242 aa            linear   MAM 02-DEC-2023
DEFINITION  prosalusin isoform X2 [Dama dama].
ACCESSION   XP_061012159
VERSION     XP_061012159.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156176.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..242
                     /product="prosalusin isoform X2"
                     /calculated_mol_wt=26181
     Region          42..160
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            93..100
                     /site_type="other"
                     /note="Walker A motif"
                     /db_xref="CDD:99707"
     Site            order(94..101,161,199)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:99707"
     Site            157..162
                     /site_type="other"
                     /note="Walker B motif"
                     /db_xref="CDD:99707"
     Site            213
                     /site_type="other"
                     /note="arginine finger"
                     /db_xref="CDD:99707"
     CDS             1..242
                     /gene="TOR2A"
                     /coded_by="XM_061156176.1:72..800"
                     /db_xref="GeneID:133065406"
ORIGIN      
        1 maaatsscrp wgslvgliwl vsaaaaswdl nslrcnfgsf cecdfrpdlq glecdlaqhl
       61 agqhlarslv vkalkaflqd papakplvls lhgwtgtgks yvssllahyl frdglrsphv
      121 hhfspvihfp hpshmerykk dlkswvqgnl tacsrslflf demdklapgl ievlrpflgs
      181 swvvygtnyr kaififirwl lalghhgras pgrpgalpat paapraalca qragpagpga
      241 qg
//
LOCUS       XP_061012160             999 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 16 [Dama dama].
ACCESSION   XP_061012160
VERSION     XP_061012160.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156177.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..999
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..999
                     /product="tetratricopeptide repeat protein 16"
                     /calculated_mol_wt=112929
     Region          61..89
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(62,65..66,69..70,72,96,99..100,103..104,106..107,
                     130,133..134,137..138,141)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          64..359
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          94..124
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          129..164
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          169..199
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          204..232
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          237..280
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          278..>462
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          285..313
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          333..359
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(335..336,339..340,342,366,369..370,373..374,
                     376..377,400,403..404,407..408,411)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          364..394
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          399..434
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          <650..>789
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     CDS             1..999
                     /gene="TTC16"
                     /coded_by="XM_061156177.1:1..3000"
                     /db_xref="GeneID:133065407"
ORIGIN      
        1 mtdsgedgle hdkapsqhip kpwvipmpkg alqrifgtsq ifqnfddikp katgltvplk
       61 vreyyhrahq cleqedwema vlffsralhl dpqlvefyal raeayiqlcd fssaaqnlrk
      121 ayysqpenkd ylerlalvly lkgqclfeqc afldaltvfs qaselqpekv cfryrclacl
      181 lalkkhrecl sfvtkevkqg ttnadvyilr arlynffqkp nlcyrdlhsa llldpkhpqa
      241 kvllqvmvgq aqqarqdagv lavqgklqha lhcincaien npldpsfflf rgtmyrrlqd
      301 fdlavedflk aldmmsehqe elvqqaqrql llayndfavh cymqgayqes vlllnkalkd
      361 eqqekglyin rgdcffqlgn ltfaeadyqq alalspkdeg ahlrmgllqe klgfceqrsr
      421 qfqkaenhfs maiqhnprkp qyylyrarsr qlmqnifgar qdvatvllld pkqpkllpmm
      481 anlfpgmsve evlssqvanl arlqlervve hslytstpqd ilgqlkdrkq raraliiswk
      541 lepplletsk emeaprqfpq akpegpeeev qvsgkekklk lapskesslt dsyvsqtslg
      601 silgfrtrst setetsstgq eyrststtvv tvsdssllrt pssdsgdsrk dlslnhspre
      661 tkstpghhqr psrteatliq sqrpsktdad qvqsqrpskt eatlihsqrp skmdttqiqs
      721 qrpsktdtaq iksqrpskme aalihsqrps ktdttqiqnq rpsmteaali hsqrpsktda
      781 tqiqsqrpsk teatvihsqr psrteaalih sqrpsktdaa qiqnqrpskt eaafihsqrp
      841 srmeatlihs qrpskmevtq iqnqrpsrae aawsprqkln ktqatqgsrr rlrkskgarg
      901 qswrlrkaaa tqdqswrmiq spskintsyd sswspsntea tkgqaqsqrr sqskaaqsqs
      961 aspgasktev twglnpslsn mqtaqgprqk pspdseapl
//
LOCUS       XP_061012161             402 aa            linear   MAM 02-DEC-2023
DEFINITION  LIM homeobox transcription factor 1-beta isoform X1 [Dama dama].
ACCESSION   XP_061012161
VERSION     XP_061012161.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156178.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..402
                     /product="LIM homeobox transcription factor 1-beta isoform
                     X1"
                     /calculated_mol_wt=44786
     Region          56..108
                     /region_name="LIM1_Lmx1b"
                     /note="The first LIM domain of Lmx1b; cd09371"
                     /db_xref="CDD:188757"
     Site            order(56,59,77,80,83,86,103,106)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188757"
     Region          115..169
                     /region_name="LIM2_Lmx1a_Lmx1b"
                     /note="The second LIM domain of Lmx1a and Lmx1b; cd09378"
                     /db_xref="CDD:188764"
     Site            order(115,118,137,140,143,146,165,168)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188764"
     Region          220..276
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..402
                     /gene="LMX1B"
                     /coded_by="XM_061156178.1:1..1209"
                     /db_xref="GeneID:133065410"
ORIGIN      
        1 mdiatgpesl ercfprgqtd cakmldgikm eehalrpgpa tlgvllgsdc phpavcegcq
       61 rpisdrflmr vnesswheec lqcaacqqal ttscyfrdrk lyckqdyqql faakcsgcme
      121 kiaptefvmr alecvyhlgc fcccvcerql rkgdefvlke gqllckgdye kekdllssvs
      181 pdesdsvkse dedgdmkpak gqgsqskgsg ddgkdprrpk rprtilttqq rrafkasfev
      241 sskpcrkvre tlaaetglsv rvvqvwfqnq rakmkklarr hqqqqeqqns qrlgqevlss
      301 rmegmmasyt plappqqqiv ameqspygss dpfqqgltpp qmpgdhmnpy gndsifhdid
      361 sdtsltslsd cflgssdvgs lqarvgnpid rlysmqssyf as
//
LOCUS       XP_061012162             395 aa            linear   MAM 02-DEC-2023
DEFINITION  LIM homeobox transcription factor 1-beta isoform X2 [Dama dama].
ACCESSION   XP_061012162
VERSION     XP_061012162.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156179.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..395
                     /product="LIM homeobox transcription factor 1-beta isoform
                     X2"
                     /calculated_mol_wt=43971
     Region          56..108
                     /region_name="LIM1_Lmx1b"
                     /note="The first LIM domain of Lmx1b; cd09371"
                     /db_xref="CDD:188757"
     Site            order(56,59,77,80,83,86,103,106)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188757"
     Region          115..169
                     /region_name="LIM2_Lmx1a_Lmx1b"
                     /note="The second LIM domain of Lmx1a and Lmx1b; cd09378"
                     /db_xref="CDD:188764"
     Site            order(115,118,137,140,143,146,165,168)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188764"
     Region          220..276
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..395
                     /gene="LMX1B"
                     /coded_by="XM_061156179.1:1..1188"
                     /db_xref="GeneID:133065410"
ORIGIN      
        1 mdiatgpesl ercfprgqtd cakmldgikm eehalrpgpa tlgvllgsdc phpavcegcq
       61 rpisdrflmr vnesswheec lqcaacqqal ttscyfrdrk lyckqdyqql faakcsgcme
      121 kiaptefvmr alecvyhlgc fcccvcerql rkgdefvlke gqllckgdye kekdllssvs
      181 pdesdsvkse dedgdmkpak gqgsqskgsg ddgkdprrpk rprtilttqq rrafkasfev
      241 sskpcrkvre tlaaetglsv rvvqvwfqnq rakmkklarr hqqqqeqqns qrlgqevlss
      301 rmegmmasyt plappqqqiv ameqspygss dpfqqgltpp qmpgndsifh didsdtslts
      361 lsdcflgssd vgslqarvgn pidrlysmqs syfas
//
LOCUS       XP_061012163            1040 aa            linear   MAM 02-DEC-2023
DEFINITION  adhesion G-protein coupled receptor D2 [Dama dama].
ACCESSION   XP_061012163
VERSION     XP_061012163.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156180.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1040
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1040
                     /product="adhesion G-protein coupled receptor D2"
                     /calculated_mol_wt=112373
     Region          111..297
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cl22861"
                     /db_xref="CDD:473984"
     Site            order(163,246,248,255,258)
                     /site_type="active"
                     /note="calcium mediated ligand binding site [active]"
                     /db_xref="CDD:238086"
     Region          642..687
                     /region_name="GPS"
                     /note="GPCR proteolysis site, GPS, motif; pfam01825"
                     /db_xref="CDD:460350"
     Region          700..962
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          703..727
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320383"
     Region          736..757
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320383"
     Region          767..789
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320383"
     Region          808..824
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320383"
     Region          843..866
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320383"
     Region          901..923
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320383"
     Region          925..950
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320383"
     CDS             1..1040
                     /gene="ADGRD2"
                     /coded_by="XM_061156180.1:157..3279"
                     /db_xref="GeneID:133065413"
ORIGIN      
        1 mapwcyclla flirslsgtp snspgesrnp wvtapvapge vvetadevck fpgqrlswwq
       61 aqesceqrlg hlvlpppdgl laarlpdpiw vgqreaplrr ppqrrarata almfgersad
      121 raarlrtplp algeltacah vqwdatssdp aalfslavpt lanalqlraf aepggavhaa
      181 lvvrghhapf raafradgrw hhvcatweql ggrwslfadg rrragarglg aghplppggi
      241 lvlgqdqdsl gggfsardaf sgnltdfhlw aralspaqml raracappps glvfrwdlga
      301 ldvtpsllpp vwvrllcpvp seecpmwdpg phtegsllcl qplpflccyr tekyrrlqda
      361 qswpgqdvis qvnalanaiv llpdplseah gdlslteaas flsilegvla ketaplgpaa
      421 llavlcflkr vaalgtwepe pttgpweqlg qavmsvaslv leeplagawl svseavggpm
      481 alvasmqrla pllnsmltse rprmhlqyhh aglevqrlrl reastegyvf tvpgghpegp
      541 ghiripaaev rrllgkglsg vtvihswfss svfqhtlgap gqepwapdsp eatsrmqrfl
      601 stqvgsaiis sevwdetgea ntavtfhlqh qtqafppklv epvcafwnfs ispdsggswa
      661 ttgctvtaly qgstacfcnh stnfavllqv ydvqrgpeee sllrtlsfvg cgvsfctlst
      721 tfllflaagv pkseratvhk nltfslasae gflmasewak askvacvavt avmhllflva
      781 ffwmlvegll lwskvvavsm rpgprmplyy atgwgvpvai vaitlamsph dyvatghcwl
      841 nvhtdaiwaf vgpvlfvlta ntcilvrvvi vtvssarrra rmlspqpcvq qqlriqmwat
      901 vkpvlvllpv lgltwlvgll vhlsptwaya avglnslqgp yiflvyaayn gevrsalqrm
      961 aekkaaeaft arssptglgf hsrpscpwev arddprvlap perhlalrgt rgpripttfs
     1021 siaepersav eltafkasgf
//
LOCUS       XP_061012164             406 aa            linear   MAM 02-DEC-2023
DEFINITION  LIM/homeobox protein Lhx2 [Dama dama].
ACCESSION   XP_061012164
VERSION     XP_061012164.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156181.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..406
                     /product="LIM/homeobox protein Lhx2"
                     /calculated_mol_wt=44256
     Region          43..106
                     /region_name="LIM1_Lhx2"
                     /note="The first LIM domain of Lhx2; cd09469"
                     /db_xref="CDD:188853"
     Site            order(53,56,74,77,80,83,102,105)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188853"
     Region          111..169
                     /region_name="LIM2_Lhx2_Lhx9"
                     /note="The second LIM domain of Lhx2 and Lhx9 family;
                     cd09377"
                     /db_xref="CDD:188763"
     Site            order(115,118,137,140,143,146,165,168)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188763"
     Region          <247..378
                     /region_name="COG5576"
                     /note="Homeodomain-containing transcription factor
                     [Transcription]"
                     /db_xref="CDD:227863"
     Region          267..323
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..406
                     /gene="LHX2"
                     /coded_by="XM_061156181.1:1..1221"
                     /db_xref="GeneID:133065415"
ORIGIN      
        1 mlfhslsgpe vhgvidemdr rakseapais saidrgdtet tmpsissdra alcagcggki
       61 sdryyllavd kqwhmrclkc cecklnlese ltcfskdgsi yckedyyrrf svqrcarchl
      121 gisasemvmr ardlvyhlnc ftcttcnkml ttgdhfgmkd slvycrlhfe allqgeypah
      181 fnhadvaaaa aaaaaaksag lgaaganplg lpyyngvgtv qkgrprkrks pgpgadlaay
      241 naalscnend aehldrdqpy pssqktkrmr tsfkhhqlrt mksyfainhn pdakdlkqla
      301 qktgltkrvl qvwfqnarak frrnllrqen tgvdksteaa lqtgtpsgpa selsnaslsp
      361 sstpttltdl tsptlptvts vltsvpgnle ghephspsqt tltnlf
//
LOCUS       XP_061012165            1281 aa            linear   MAM 02-DEC-2023
DEFINITION  protein crumbs homolog 2 [Dama dama].
ACCESSION   XP_061012165
VERSION     XP_061012165.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156182.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1281
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1281
                     /product="protein crumbs homolog 2"
                     /calculated_mol_wt=133997
     Region          73..108
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          110..146
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(110,113,127)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          149..184
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          186..223
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(186,189,203)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          228..261
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          322..358
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(322,325,339)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          360..395
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(360,363,377)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          467..590
                     /region_name="Laminin_G_2"
                     /note="Laminin G domain; pfam02210"
                     /db_xref="CDD:460494"
     Region          611..641
                     /region_name="EGF"
                     /note="EGF-like domain; pfam00008"
                     /db_xref="CDD:394967"
     Region          658..775
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cd00110"
                     /db_xref="CDD:238058"
     Region          811..841
                     /region_name="EGF"
                     /note="EGF-like domain; pfam00008"
                     /db_xref="CDD:394967"
     Region          900..1023
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cl22861"
                     /db_xref="CDD:473984"
     Region          1061..1091
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          1174..1205
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     CDS             1..1281
                     /gene="CRB2"
                     /coded_by="XM_061156182.1:1..3846"
                     /db_xref="GeneID:133065417"
ORIGIN      
        1 malarpgtpd prpsapllll lllhgapvpa lpagtvpset sgacasdpca pgtecqaten
       61 asytcvppeh qgcasqpchh galcvpqgpg pddfrcycvp gfqgphceld idecasrpcr
      121 hgatchnlad hyechcplgy egvtcetevd ecasapclhg gscldgvgsy rcvcapgygg
      181 ascqldldec qsqpcahggv crdlvngfrc dcadtgyege rcelevleca sapcannasc
      241 leglssfrcl cwpgysgerc evdedecavg pcqhggqclq rsdptlyggv qatfpgafsf
      301 rqaagfvcrc psgfegddcg vdvdecasrp clsgglcqdl psgfqchcpd gytgptceed
      361 mdeclsepcl hggtcedtva gyicgcpqaw ggpdcsvplt gcqghtcppt atciptfesg
      421 vhsytcrcpp gthgpfcgqn ttfsmvagnp vrasvpagss lglalrfrtt irvgalamcs
      481 dtqgsmelal vearlqatlw shgknvlvlr llepplndgr whraevtlrl gvlelrlwhe
      541 gcparlcvas spvamppmaa paptpagsrf tqlggvafag clqdvqvdgh lllpedlgen
      601 vllgcqhqeh cqplpcahgg vcvdlwthfh cdcprpysgp tcadevpaat fglggtlssa
      661 sflldqppgp nltvsfllrt repaglllql tndsaagltv flsegqirae vlgspalvlp
      721 grwddglrhl vtlsfgpdql qgvgrqvhvg grllpadaep wggpfrgcmq dvrlndlhlp
      781 ffllgnsslp svpgrgqswn lttgcvsedt cnpepclngg tclvtwndfh ctcpanftgp
      841 tcaqqlwcpg qpclppatce evpdgfvcva ettfregppa efsghnassg ralrglslvf
      901 rtrdseagll raedgpgavw lavrngslaa gvrsgpglps avlpapgprv adgawhrvrl
      961 ameqpaaaas rwllwldgaa tpvslrglag dldflrgpga arvllaenft gclgrvalgg
     1021 hplplarprp gaapgsrepf aawpgapaph lgcrgapvcv pspclhggac rdlfdafaca
     1081 cgpgwegprc edradpcrsa pcargrchah pdgrfecrcp pgfagprcrl pvppegcsln
     1141 itclnggrce egpqgancsc qesfagqrcq ipceanpcln ggtcraadgv yecicsarfs
     1201 gqfcevvkgl plplpfplle vavpaacacl lllllgllsg ilaarkrrqs egtyspsqqe
     1261 vagarlemds vlkvppeerl i
//
LOCUS       XP_061012166             316 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1K1 [Dama dama].
ACCESSION   XP_061012166
VERSION     XP_061012166.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156183.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..316
                     /product="olfactory receptor 1K1"
                     /calculated_mol_wt=34311
     Region          38..302
                     /region_name="7tmA_OR1A-like"
                     /note="olfactory receptor subfamily 1A and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15235"
                     /db_xref="CDD:320363"
     Region          60..86
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320363"
     Site            order(82,85..86,98..103,105..106,109,154,156..160,196,
                     199..201,203..205,207..208,253,256..257,259..260,263,
                     269..270,272..274,277,280..281)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320363"
     Region          98..128
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320363"
     Region          141..162
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320363"
     Region          196..226
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320363"
     Region          233..263
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320363"
     Region          270..295
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320363"
     CDS             1..316
                     /gene="LOC133065419"
                     /coded_by="XM_061156183.1:1..951"
                     /db_xref="GeneID:133065419"
ORIGIN      
        1 mdaanesseg spfillgltt npsqrrplfl lflvlyvagi lgnglivaai raspalhtpm
       61 yfllahlsfa dlcftsitvp kmlanllahd rsispagclt qmyfffalgv tdscllaama
      121 ydryvairhp lhyatrmsra vctalvgtaw lvshahsllh illmarlsfc ashqvphffc
      181 dhqpllrlsc sdtrhiqlli ftegaavvvt pfllilasyg aiaaavlqlp saagrlravs
      241 tcgshlavvg lfygtviavy frptsryeae rgrvatvmyt vvtpmlnpvi yslrnrdvqg
      301 alralftqrr isagds
//
LOCUS       XP_061012167             308 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1L6-like [Dama dama].
ACCESSION   XP_061012167
VERSION     XP_061012167.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156184.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..308
                     /product="olfactory receptor 1L6-like"
                     /calculated_mol_wt=34712
     Region          23..300
                     /region_name="7tmA_OR1A-like"
                     /note="olfactory receptor subfamily 1A and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15235"
                     /db_xref="CDD:320363"
     Region          25..51
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320363"
     Region          58..84
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320363"
     Site            order(80,83..84,96..101,103..104,107,152,154..158,194,
                     197..199,201..203,205..206,251,254..255,257..258,261,
                     267..268,270..272,275,278..279)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320363"
     Region          96..126
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320363"
     Region          139..160
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320363"
     Region          194..224
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320363"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320363"
     Region          268..293
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320363"
     CDS             1..308
                     /gene="LOC133065420"
                     /coded_by="XM_061156184.1:1..927"
                     /db_xref="GeneID:133065420"
ORIGIN      
        1 mrgnqshite flllgltsdl kqqvwlfasf lamylvnvgg nsviiaaiqg dvhlhtpmyf
       61 flsnlslvdi cftsvivpqm lvnmltqrka ilfaqclaqm yffvafgitd sfllaamald
      121 ryvaichplh ytttmnprrc lqlvtaswlv shlhslthtv lmarlsfcgp niihhffcdv
      181 qpllmlscsd tsvnellaft egsfvimspf ifiivsyvyi travlrvpsg rgrykvfstc
      241 gshltvvalf ygtiisvyir psstysvmkd rvitviytvv ipmlnpfiys lrnkdmkqal
      301 kklmrktd
//
LOCUS       XP_061012168             311 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1L4-like [Dama dama].
ACCESSION   XP_061012168
VERSION     XP_061012168.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156185.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..311
                     /product="olfactory receptor 1L4-like"
                     /calculated_mol_wt=34981
     Region          25..302
                     /region_name="7tmA_OR1A-like"
                     /note="olfactory receptor subfamily 1A and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15235"
                     /db_xref="CDD:320363"
     Region          27..53
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320363"
     Region          60..86
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320363"
     Site            order(82,85..86,98..103,105..106,109,154,156..160,196,
                     199..201,203..205,207..208,253,256..257,259..260,263,
                     269..270,272..274,277,280..281)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320363"
     Region          98..128
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320363"
     Region          141..162
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320363"
     Region          196..226
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320363"
     Region          233..263
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320363"
     Region          270..295
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320363"
     CDS             1..311
                     /gene="LOC133065421"
                     /coded_by="XM_061156185.1:1..936"
                     /db_xref="GeneID:133065421"
ORIGIN      
        1 memknyssst adfillgiss npqmqkplfa vflvmylvtl vgngliilai hsdsrlhtpm
       61 yfflsnlsfm dicfttvivp nmlvnllset kfisyvgclv qmyffmalgn tdsyllasma
      121 idrlvaicnp fhygvvmspr hclllllgsc tishlhtllr vllmsrlsfc ashvikhffc
      181 dtqpvlklsc sdtsssqlvv mtetlaviat pflcilfsyl riiitvlkip svagkwkafs
      241 tcgshltvvv ffygsiiyvy frplsmysvv kdrvatvmyt ivtpmlnpfi yslrnkdmkr
      301 glrklrdqgy s
//
LOCUS       XP_061012169             311 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1L4 [Dama dama].
ACCESSION   XP_061012169
VERSION     XP_061012169.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156186.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..311
                     /product="olfactory receptor 1L4"
                     /calculated_mol_wt=35036
     Region          25..302
                     /region_name="7tmA_OR1A-like"
                     /note="olfactory receptor subfamily 1A and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15235"
                     /db_xref="CDD:320363"
     Region          27..53
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320363"
     Region          60..86
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320363"
     Site            order(82,85..86,98..103,105..106,109,154,156..160,196,
                     199..201,203..205,207..208,253,256..257,259..260,263,
                     269..270,272..274,277,280..281)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320363"
     Region          98..128
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320363"
     Region          141..162
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320363"
     Region          196..226
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320363"
     Region          233..263
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320363"
     Region          270..295
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320363"
     CDS             1..311
                     /gene="LOC133065422"
                     /coded_by="XM_061156186.1:95..1030"
                     /db_xref="GeneID:133065422"
ORIGIN      
        1 memknyssst adfillgvss npqmqkplfa vflvmylvtl vgngliilai hsdsrlhtpm
       61 yfflsnlsfm dicfttvivp nmlvnllset ksisyvgclv qmyffmafan tdsyllasma
      121 idrlvaicnp fhydvvmspw rclllllgsc tishlhallr vllmsrlsfc ashvikhffc
      181 dtqpvlklsc sdtsssqtvv mtetlaviat pflcilfsyl riiitvlkip svagkwkafs
      241 tcgshltvvv ffygsviyvy frplsmysvv kdrvatvmyt ivtpmlnpfi yslrnkdmkr
      301 glrklrdkih s
//
LOCUS       XP_061012170             310 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1L1 [Dama dama].
ACCESSION   XP_061012170
VERSION     XP_061012170.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156187.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..310
                     /product="olfactory receptor 1L1"
                     /calculated_mol_wt=35050
     Region          24..300
                     /region_name="7tmA_OR1A-like"
                     /note="olfactory receptor subfamily 1A and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15235"
                     /db_xref="CDD:320363"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320363"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320363"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,252,255..256,258..259,262,268,
                     270..272,275,278..279)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320363"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320363"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320363"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320363"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320363"
     Region          269..293
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320363"
     CDS             1..310
                     /gene="LOC133065424"
                     /coded_by="XM_061156187.1:143..1075"
                     /db_xref="GeneID:133065424"
ORIGIN      
        1 mgrtnitqpt efillglssr pedqkplfam flpiylitvi gnlliiltic snthlqtpmy
       61 fflsvlsfvd icyvtviipk mlanflsetk iisygecltq myffiafgnt dsyllaamai
      121 dryvaicnpl hyitimnhrr cvlllvlsfc iphlhsllhi lltnqlifca snvihhffcd
      181 dqpvlklscs shfvkeitvm teglaiimtp fsciiisylr ifitvlkips aagkckafst
      241 cgshltvvtl fygsisyvyf kplsnytvkg riativytil tpmlntfiys lrnkdmkqgl
      301 mklmhrvkgq
//
LOCUS       XP_061012171             317 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1B1 [Dama dama].
ACCESSION   XP_061012171
VERSION     XP_061012171.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156188.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..317
                     /product="olfactory receptor 1B1"
                     /calculated_mol_wt=35040
     Region          27..306
                     /region_name="7tmA_OR1A-like"
                     /note="olfactory receptor subfamily 1A and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15235"
                     /db_xref="CDD:320363"
     Region          27..53
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320363"
     Region          60..86
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320363"
     Site            order(82,85..86,98..103,105..106,109,154,156..160,200,
                     203..205,207..209,211..212,257,260..261,263..264,267,
                     273..274,276..278,281,284..285)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320363"
     Region          98..128
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320363"
     Region          141..162
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320363"
     Region          200..230
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320363"
     Region          237..267
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320363"
     Region          274..299
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320363"
     CDS             1..317
                     /gene="LOC133065425"
                     /coded_by="XM_061156188.1:1..954"
                     /db_xref="GeneID:133065425"
ORIGIN      
        1 mgcapnashs pvflllvfsg aevppivlfv lflaiylttm mgnvtlvlli srdsrlqspm
       61 yyllrglsvi dmglstailp qllahlvthd pvipaarcla qffffyvfgv tdtlvisvma
      121 ldrymaicdp lhyhsmmnrq ccarllalcw vvsvvhtmlh vglllplswa adaegnvrll
      181 hffcdhrpll rascsdihpn elaifleggf lmmgpcaliv lsyvrigati lrlpsaagrr
      241 ravstcgshl tmvfffygti iwvyfqppsq nsqdqdmvas vmytsitpla npfvyslrnk
      301 dvksalhrll rggrvas
//
LOCUS       XP_061012172             314 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: olfactory receptor 1Q1-like [Dama dama].
ACCESSION   XP_061012172
VERSION     XP_061012172.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156189.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..314
                     /product="LOW QUALITY PROTEIN: olfactory receptor
                     1Q1-like"
                     /calculated_mol_wt=35479
     Region          34..301
                     /region_name="7tmA_OR1A-like"
                     /note="olfactory receptor subfamily 1A and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15235"
                     /db_xref="CDD:320363"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320363"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,252,255..256,258..259,262,
                     268..269,271..273,276,279..280)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320363"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320363"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320363"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320363"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320363"
     Region          269..294
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320363"
     CDS             1..314
                     /gene="LOC133065426"
                     /coded_by="XM_061156189.1:1..945"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /db_xref="GeneID:133065426"
ORIGIN      
        1 mdnttwtsvs hfvllgisth qeeqillfll fllmypinis gnsviiilvi stprlqmpmy
       61 iflsnlalad icftsttvpk mlqnifsstk aisymgcxtq tyfficfaam enfllavmay
      121 dryiaichpf cyhmilnrkl cshlvvmchi lshlhallht flmgrlifca dnriphffcd
      181 lyplmkiscs sthlntlmih regvivinga lavimasyac iisavlrsps akgkrrafpt
      241 cgshltvvai fygtltwvyf rpltsysvag griltviytv vtpmlnpfiy slrnkdvkga
      301 frnwmnriwt ssfr
//
LOCUS       XP_061012173             340 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1361-like [Dama dama].
ACCESSION   XP_061012173
VERSION     XP_061012173.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156190.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..340
                     /product="olfactory receptor 1361-like"
                     /calculated_mol_wt=37551
     Region          39..308
                     /region_name="7tmA_OR1_7-like"
                     /note="olfactory receptor families 1, 7, and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15918"
                     /db_xref="CDD:320584"
     Region          40..66
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320584"
     Region          73..99
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320584"
     Site            order(95,98..99,111..116,118..119,122,167,169..173,209,
                     212..214,216..218,220..221,266,269..270,272..273,276,
                     282..283,285..287,290,293..294)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320584"
     Region          111..141
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320584"
     Region          154..175
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320584"
     Region          209..239
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320584"
     Region          246..276
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320584"
     Region          283..308
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320584"
     CDS             1..340
                     /gene="LOC133065427"
                     /coded_by="XM_061156190.1:180..1202"
                     /db_xref="GeneID:133065427"
ORIGIN      
        1 mtlpgppqdr lipdtdrrnq tgtygfllmg lsehpeqqpl lfglflgmyl vtvwgnllii
       61 laigsdvhlh tpmylflanl sfsdiglist vipkmlnnig sgskwisygg cltqlyffgl
      121 fadldnflla vmaldryvai sqplhyaiim nsqrcvllva gswvvttfha lvhtllvtrl
      181 sfcgpnviph ffcdlvpllk lacsstyvnd lvlilvagtl ligpficilt syfyialail
      241 ridspkgkqk afsnctshls vvslfyttai gvylcppssp sggkdrvfsv mytvvtpmln
      301 pfiyslrnrd ikgalgkilr rntlntlswd rkvqisntrs
//
LOCUS       XP_061012174             315 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1N2-like [Dama dama].
ACCESSION   XP_061012174
VERSION     XP_061012174.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156191.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..315
                     /product="olfactory receptor 1N2-like"
                     /calculated_mol_wt=34285
     Region          25..294
                     /region_name="7tmA_OR1_7-like"
                     /note="olfactory receptor families 1, 7, and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15918"
                     /db_xref="CDD:320584"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320584"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320584"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,252,255..256,258..259,262,
                     268..269,271..273,276,279..280)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320584"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320584"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320584"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320584"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320584"
     Region          269..294
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320584"
     CDS             1..315
                     /gene="LOC133065428"
                     /coded_by="XM_061156191.1:1..948"
                     /db_xref="GeneID:133065428"
ORIGIN      
        1 mdqinqssvt eflllglses peqqpllfgi flalylvtml gnlliilaig sdphlhtpmy
       61 fflanlslad asfssttvpk mlvniqthsq tisyggclaq mhlfmtfgal ddfllgvmay
      121 dryvaicrpl hystlmsplv cmlllaacwv ltnlaallht llmarlsfca dntihhffcd
      181 vvpllqlscs dtsinqvalf avgsmiltgp lsliilsytr iissilrvps asgrqkafst
      241 cgshltvvfl fygtaigvyl cppsshsgge drlaavfytv vtpmlnpfiy slrnkdmkva
      301 lsrllgihtl ssqgl
//
LOCUS       XP_061012175             315 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1N2-like [Dama dama].
ACCESSION   XP_061012175
VERSION     XP_061012175.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156192.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..315
                     /product="olfactory receptor 1N2-like"
                     /calculated_mol_wt=34271
     Region          25..294
                     /region_name="7tmA_OR1_7-like"
                     /note="olfactory receptor families 1, 7, and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15918"
                     /db_xref="CDD:320584"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320584"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320584"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,252,255..256,258..259,262,
                     268..269,271..273,276,279..280)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320584"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320584"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320584"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320584"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320584"
     Region          269..294
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320584"
     CDS             1..315
                     /gene="LOC133065429"
                     /coded_by="XM_061156192.1:1..948"
                     /db_xref="GeneID:133065429"
ORIGIN      
        1 mdqinqssvt eflllglses peqqpllfgi flalylvtml gnlliilaig sdphlhtpmy
       61 fflanlslad asfssttvpk mlvniqthsq tisyggclaq mhlfmtfgal ddfllgvmay
      121 dryvaicrpl hystlmsplv cmlllaacwv ltnlaallht llmarlsfca dntihhffcd
      181 vvpllqlscs dtsinqvalf avgsmiltgp lsliilsytr iissilrvps asgrqkafst
      241 cgshltvvfl fygtavgvyl cppsshsgge drlaavfytv vtpmlnpfiy slrnkdmkva
      301 lsrllgihtl ssqgl
//
LOCUS       XP_061012176             479 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1J4-like [Dama dama].
ACCESSION   XP_061012176
VERSION     XP_061012176.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156193.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..479
                     /product="olfactory receptor 1J4-like"
                     /calculated_mol_wt=53420
     Region          31..>142
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          31..51
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          60..82
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          98..120
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          193..460
                     /region_name="7tmA_OR1_7-like"
                     /note="olfactory receptor families 1, 7, and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15918"
                     /db_xref="CDD:320584"
     Region          193..218
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320584"
     Region          225..251
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320584"
     Site            order(247,250..251,263..268,270..271,274,319,321..325,361,
                     364..366,368..370,372..373,418,421..422,424..425,428,
                     434..435,437..439,442,445..446)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320584"
     Region          263..293
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320584"
     Region          306..327
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320584"
     Region          361..391
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320584"
     Region          398..428
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320584"
     Region          435..460
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320584"
     CDS             1..479
                     /gene="LOC133065432"
                     /coded_by="XM_061156193.1:1..1440"
                     /db_xref="GeneID:133065432"
ORIGIN      
        1 mkrvnqssls kflllglpir peqqggffal flgmylttvl gnlliillir ldphlhtpmy
       61 fflshlaltd vsfssvtvpk mlinmktqdq sipyagcitq myfflfftgl ddflltsmay
      121 dwyvaichpl hystimgqgl ctllvtvswi lscanalcht llltrlmkrv nqssmsefll
      181 lglpirpeqq gmfftlflgm ylttvlgnll iillirldar lhtpmyffls hlaltdvsfs
      241 svtipkmlin mktqdqsipy agcitqmyff ifftglddfl ltsmaydryv aichplhyst
      301 imgqglctll vtvswilsca nalchtlllt rlsfcadhsi phffcdlgal lklscsdtsl
      361 nelaiftagv aviilplvci lisygrigat ilkvpstkgi ckalstcgsh lsvvslyygt
      421 iiglyifpss stsrdkitia svmytvvtpl lnpfiyslrn rdmtgalerl lhrakvlsq
//
LOCUS       XP_061012177             480 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1N1-like [Dama dama].
ACCESSION   XP_061012177
VERSION     XP_061012177.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156194.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..480
                     /product="olfactory receptor 1N1-like"
                     /calculated_mol_wt=53559
     Region          41..>216
                     /region_name="7tm_1"
                     /note="7 transmembrane receptor (rhodopsin family);
                     pfam00001"
                     /db_xref="CDD:459624"
     Region          192..461
                     /region_name="7tmA_OR1_7-like"
                     /note="olfactory receptor families 1, 7, and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15918"
                     /db_xref="CDD:320584"
     Region          193..219
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320584"
     Region          226..252
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320584"
     Site            order(248,251..252,264..269,271..272,275,320,322..326,362,
                     365..367,369..371,373..374,419,422..423,425..426,429,
                     435..436,438..440,443,446..447)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320584"
     Region          264..294
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320584"
     Region          307..328
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320584"
     Region          362..392
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320584"
     Region          399..429
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320584"
     Region          436..461
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320584"
     CDS             1..480
                     /gene="LOC133065433"
                     /coded_by="XM_061156194.1:1..1443"
                     /db_xref="GeneID:133065433"
ORIGIN      
        1 mrrenqssvs eflllglpiw peqqgaffal flgvylttvl gnlliillir ldphlhtpmy
       61 fflshlaltd vsfssvtvpk mlismqtqdq sipyagciaq myffifftdl dsflitsmay
      121 dryvavccpl hyttimrqel caslvagswi lsgasslsht llltrlsffm enqtsiseff
      181 lrgisgspeq qqlffgiflc mylvtlmgnv liilaigsdp ylhtpmyffl anlsfvdmgl
      241 tsstvtkmlv nvqtqlrtis yvgcltqmyf flmfgdldsf flavmaydry vaicrplhyc
      301 tvmslrvcvl llalcwslth ivalthtllm arlsfcvvge iahffcditp vlklscsdtr
      361 inelmvfalg gtvlmipfic ivisyihivs avlrvrtpgg ggkafstcss hlcvvcvfyg
      421 tlfsaylcpp svasedkdia aaavytvvtp mlnpfiyslr nkdmnvalkr llghrriias
//
LOCUS       XP_061012178             310 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 1L8-like [Dama dama].
ACCESSION   XP_061012178
VERSION     XP_061012178.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156195.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..310
                     /product="olfactory receptor 1L8-like"
                     /calculated_mol_wt=35240
     Region          25..301
                     /region_name="7tmA_OR1A-like"
                     /note="olfactory receptor subfamily 1A and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15235"
                     /db_xref="CDD:320363"
     Region          27..53
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320363"
     Region          60..86
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320363"
     Site            order(82,85..86,98..103,105..106,109,154,156..160,196,
                     199..201,203..205,207..208,253,256..257,259..260,263,269,
                     271..273,276,279..280)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320363"
     Region          98..128
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320363"
     Region          141..162
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320363"
     Region          196..226
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320363"
     Region          233..263
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320363"
     Region          270..294
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320363"
     CDS             1..310
                     /gene="LOC133065434"
                     /coded_by="XM_061156195.1:1..933"
                     /db_xref="GeneID:133065434"
ORIGIN      
        1 merlnqtnsv sefillglss rpedqkplfi lflimyliti tgnvliilai hsdpqlhtpm
       61 yfflsvlsfi diwytttivp rmlvnflsek ktisyagclt qmyffyalgn tdsyllaama
      121 ydryvaicdp fhyvtimscr tcvllvafsc slphfhsllh tlllnqlsfc nsnvvhhflc
      181 dinpllklsc ssifvndlti kteglvfwvt pflcivfsyv riliavlrvp saagkrkafs
      241 tcgshftvvi lfygsifyvh lqplssytvr drvatlvytv lssmlnpfiy slrnkdmkrg
      301 lgklmgrrks
//
LOCUS       XP_061012179              73 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin-like protein 5 [Dama dama].
ACCESSION   XP_061012179
VERSION     XP_061012179.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156196.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..73
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..73
                     /product="ubiquitin-like protein 5"
                     /calculated_mol_wt=8430
     Region          1..71
                     /region_name="Ubl_UBL5"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin-like
                     protein 5 (UBL5) and similar proteins; cd01791"
                     /db_xref="CDD:340489"
     Site            order(1,15,17..19,22,26,29..30,33..34)
                     /site_type="other"
                     /note="HIND interaction site [polypeptide binding]"
                     /db_xref="CDD:340489"
     CDS             1..73
                     /gene="LOC133065435"
                     /coded_by="XM_061156196.1:39..260"
                     /db_xref="GeneID:133065435"
ORIGIN      
        1 mievvcndrl grkvrvkcnt ddtigdlkkl iaaqtgtrwn kivlkkwyti fndhvslgdy
       61 eihdgmnlel yyq
//
LOCUS       XP_061012180             392 aa            linear   MAM 02-DEC-2023
DEFINITION  LIM/homeobox protein Lhx6 isoform X1 [Dama dama].
ACCESSION   XP_061012180
VERSION     XP_061012180.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156197.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..392
                     /product="LIM/homeobox protein Lhx6 isoform X1"
                     /calculated_mol_wt=42992
     Region          99..152
                     /region_name="LIM1_Lhx6"
                     /note="The first LIM domain of Lhx6; cd09380"
                     /db_xref="CDD:188766"
     Site            order(99,102,120,123,126,129,148,151)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188766"
     Region          160..214
                     /region_name="LIM2_Lhx6"
                     /note="The second LIM domain of Lhx6; cd09382"
                     /db_xref="CDD:188768"
     Site            order(160,163,182,185,188,191,210,213)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188768"
     Region          249..305
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..392
                     /gene="LHX6"
                     /coded_by="XM_061156197.1:1..1179"
                     /db_xref="GeneID:133065436"
ORIGIN      
        1 mywkhenaap alpegcrlpa eggpatdqvm aqpgsgckat trclegtapp amaqsdaeal
       61 agaldkdegr aspctpstps vcsppsaass vpsagknics scgleildry llkvnnliwh
      121 vrclecsvcr tslrqqnscy iknkeifckm dyfsrfgtkc arcgrqiyas dwvrrargna
      181 yhlacfacfs ckrqlstgee fglveekvlc rihydtmien lkraaengng ltlegavpse
      241 qdsqpkpakr artsftaeql qvmqaqfaqd nnpdaqtlqk ladmtglsrr viqvwfqncr
      301 arhkkhtpqh pvppsgapps rlpsalsddi hyspfssper armvtlhgyi esqvqcgqvh
      361 crlpytappv hlkadmdgpl ssrgekvilf qy
//
LOCUS       XP_061012181             377 aa            linear   MAM 02-DEC-2023
DEFINITION  LIM/homeobox protein Lhx6 isoform X2 [Dama dama].
ACCESSION   XP_061012181
VERSION     XP_061012181.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156198.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..377
                     /product="LIM/homeobox protein Lhx6 isoform X2"
                     /calculated_mol_wt=41196
     Region          99..152
                     /region_name="LIM1_Lhx6"
                     /note="The first LIM domain of Lhx6; cd09380"
                     /db_xref="CDD:188766"
     Site            order(99,102,120,123,126,129,148,151)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188766"
     Region          160..214
                     /region_name="LIM2_Lhx6"
                     /note="The second LIM domain of Lhx6; cd09382"
                     /db_xref="CDD:188768"
     Site            order(160,163,182,185,188,191,210,213)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188768"
     Region          249..305
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..377
                     /gene="LHX6"
                     /coded_by="XM_061156198.1:1..1134"
                     /db_xref="GeneID:133065436"
ORIGIN      
        1 mywkhenaap alpegcrlpa eggpatdqvm aqpgsgckat trclegtapp amaqsdaeal
       61 agaldkdegr aspctpstps vcsppsaass vpsagknics scgleildry llkvnnliwh
      121 vrclecsvcr tslrqqnscy iknkeifckm dyfsrfgtkc arcgrqiyas dwvrrargna
      181 yhlacfacfs ckrqlstgee fglveekvlc rihydtmien lkraaengng ltlegavpse
      241 qdsqpkpakr artsftaeql qvmqaqfaqd nnpdaqtlqk ladmtglsrr viqvwfqncr
      301 arhkkhtpqh pvppsgapps rlpsalsddi hyspfssper armvtlhgyi eshpfsvltl
      361 palphlsmgd lqlslsl
//
LOCUS       XP_061012182             172 aa            linear   MAM 02-DEC-2023
DEFINITION  MORN repeat-containing protein 5 [Dama dama].
ACCESSION   XP_061012182
VERSION     XP_061012182.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156199.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..172
                     /product="MORN repeat-containing protein 5"
                     /calculated_mol_wt=19841
     Region          <5..77
                     /region_name="COG4642"
                     /note="Uncharacterized conserved protein [Function
                     unknown]"
                     /db_xref="CDD:443680"
     CDS             1..172
                     /gene="MORN5"
                     /coded_by="XM_061156199.1:1..519"
                     /db_xref="GeneID:133065437"
ORIGIN      
        1 meytgsqyvg efvdgrmegd aeyilptetk yigemkdgmf hgqgtlyfpn gsrfdavwek
       61 glvvkgtytf sdglqydpen whycdsydrr fyteichglk pagisqltnm dpprkippgc
      121 ydcgdgfynp ntrivkdyny rflrnaddde hewivrtcrk gwdetmgpep ks
//
LOCUS       XP_061012183             442 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor SOX-11 [Dama dama].
ACCESSION   XP_061012183
VERSION     XP_061012183.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156200.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..442
                     /product="transcription factor SOX-11"
                     /calculated_mol_wt=46443
     Region          38..129
                     /region_name="HMG-box_SoxC_SOX11"
                     /note="high mobility group (HMG)-box found in sex
                     determining region Y (SRY)-box 11 (SOX11) and similar
                     proteins; cd22037"
                     /db_xref="CDD:438846"
     Site            order(48,50..51,53..54,56..57,61,64,68,75..77,80..81,84,
                     87..88,106,118,120..122)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438846"
     CDS             1..442
                     /gene="SOX11"
                     /coded_by="XM_061156200.1:73..1401"
                     /db_xref="GeneID:133065442"
ORIGIN      
        1 mvqqaeslea esnlpreald teegefmacs pvaldesdpd wcktasghik rpmnafmvws
       61 kierrkimeq spdmhnaeis krlgkrwkml kdsekipfir eaerlrlkhm adypdykyrp
      121 rkkpkmdpsa kpsagqspek saaggggsag agagggakts kgsskkcgkl kapaapaagg
      181 akagagkaaq pgdgggagdd yvlgslrvsg agktvkcvfl dddedeedde delqlrikqe
      241 adedddeppp haqllqppgq qpppppllrr ysvakvpasp tlssaaespe gaslydevra
      301 gaasgagggs rlyysfknit kqhppplaqp alspasarsv stssssssss ssssggedad
      361 dlmfdlslnf sqsahgagdq qlgggaaagn lslslvdkdl dsfsegslgs hfefpdyctp
      421 elsemiagdw leanfsdlvf ty
//
LOCUS       XP_061012184             106 aa            linear   MAM 02-DEC-2023
DEFINITION  small ribosomal subunit protein eS24-like [Dama dama].
ACCESSION   XP_061012184
VERSION     XP_061012184.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156201.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..106
                     /product="small ribosomal subunit protein eS24-like"
                     /calculated_mol_wt=12232
     Region          1..>104
                     /region_name="Ribosomal_S24e"
                     /note="Ribosomal protein S24e; cl00878"
                     /db_xref="CDD:469970"
     CDS             1..106
                     /gene="LOC133065450"
                     /coded_by="XM_061156201.1:54..374"
                     /db_xref="GeneID:133065450"
ORIGIN      
        1 mndtvtirtr kfmtnrllqr kqmvidvlhp gkaavpktei weklakmykt tpdvifvfgf
       61 rthfgggktt gfgmiydsld yaekeepkhr larhglyekk ktsrtq
//
LOCUS       XP_061012185             495 aa            linear   MAM 02-DEC-2023
DEFINITION  potassium voltage-gated channel subfamily F member 1 [Dama dama].
ACCESSION   XP_061012185
VERSION     XP_061012185.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156202.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..495
                     /product="potassium voltage-gated channel subfamily F
                     member 1"
                     /calculated_mol_wt=55803
     Region          23..138
                     /region_name="BTB_POZ_Kv5_KCNF1"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in KCNF/Kv5
                     subfamily of potassium voltage-gated channels; cd18381"
                     /db_xref="CDD:349690"
     Site            order(28,30..37,40,78,80..81,84,87,91,94,97,99,107..108,
                     111)
                     /site_type="other"
                     /note="putative tetramer interface [polypeptide binding]"
                     /db_xref="CDD:349690"
     Region          181..417
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     CDS             1..495
                     /gene="KCNF1"
                     /coded_by="XM_061156202.1:1..1488"
                     /db_xref="GeneID:133065452"
ORIGIN      
        1 mdgtgerslp epgsqdsrag ddieivvnvg gvrqvlygdl lsrypetrla elihclaggy
       61 dtifslcddy dpgkrefyfd rdpdafkcvi evyyfgevhm kkgicpicfk nemdfwkvdl
      121 kflddccksh lsekreelee iarrvqlild dlgvdtaegr wrrcqkcvwk flekpesscp
      181 arvvavlsfl lilvssvvmc mgtipelqvl daegnrvehp tlenvetaci gwftleyllr
      241 lfsspnklhf alsfmnivdv lailpfyvsl tlthlgarmm eltnvqqavq alrimriari
      301 fklarhssgl qtltyalkrs fkelglllmy lavgifvfsa lgytmeqshp etlfksipqs
      361 fwwaiitmtt vgygdiypkt tlgklnaais flcgviaial pihpiinnfv ryynkqrvle
      421 taarhelelm elnsgtsgeg kaggsrgdld hlpppepagk egpswssrlk lshsdtfipl
      481 lteekhhrtr lqsck
//
LOCUS       XP_061012186             157 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C2orf50 homolog [Dama dama].
ACCESSION   XP_061012186
VERSION     XP_061012186.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156203.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..157
                     /product="uncharacterized protein C2orf50 homolog"
                     /calculated_mol_wt=16996
     Region          <4..>82
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          61..>104
                     /region_name="LLC1"
                     /note="Normal lung function maintenance, Low in Lung
                     Cancer 1 protein; pfam14945"
                     /db_xref="CDD:464392"
     CDS             1..157
                     /gene="C11H2orf50"
                     /coded_by="XM_061156203.1:14..487"
                     /db_xref="GeneID:133065453"
ORIGIN      
        1 mgsrptpglq rttsagypqp strppasvps tapggpvvgr gpaggpqapk akrsalgaeg
       61 vqrdqlwrel leaekrsqqr waqnwsflkd ydpmgnkkep vklpdyvprf sdtvpsstnr
      121 avgsrvdtpv gktligldff fmegarkkkl eeelqpi
//
LOCUS       XP_061012187             418 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: neurotensin receptor type 2 [Dama dama].
ACCESSION   XP_061012187
VERSION     XP_061012187.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156204.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..418
                     /product="LOW QUALITY PROTEIN: neurotensin receptor type
                     2"
                     /calculated_mol_wt=45620
     Region          33..361
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          35..59
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          69..91
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          109..131
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          154..170
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          204..227
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          288..310
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          329..354
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..418
                     /gene="NTSR2"
                     /coded_by="XM_061156204.1:1..1257"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /db_xref="GeneID:133065456"
ORIGIN      
        1 metgsprapg pspgpalsld arlgvdtglw akvlltalys lifalgtagn alsvhvvlka
       61 ragppgrlrc hvlslalsal llllvgmpme lynfvwfhyp wvfgdlgcra yyfvrelcay
      121 atvlsvasls aerclavcqp lrarslltpr ktrrllsavw aaslglalpm avimgqkhel
      181 etaggepepa srvctvlvsr ttlqvfvqvn vlvsfvlpla ltaflngvtv shlaalcsqv
      241 psppaagssa psrlelmske rktlplgdqa tlvrrkdsrr irglrrsiqv lraivavyvv
      301 cwmpyhirrl mycyvpderw taklydfyhy fymvtntlfy issavtpvly navsssfrkl
      361 flealgslcr ehhpmepfpp gpqsparvgt asssgappgp pawmklnneq nnpdclal
//
LOCUS       XP_061012188             554 aa            linear   MAM 02-DEC-2023
DEFINITION  N-myc proto-oncogene protein [Dama dama].
ACCESSION   XP_061012188
VERSION     XP_061012188.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156205.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..554
                     /product="N-myc proto-oncogene protein"
                     /calculated_mol_wt=59128
     Region          101..462
                     /region_name="Myc_N"
                     /note="Myc amino-terminal region; pfam01056"
                     /db_xref="CDD:460045"
     Region          468..554
                     /region_name="bHLHzip_N-Myc_like"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in N-Myc and similar proteins; cd11456"
                     /db_xref="CDD:381462"
     Site            order(468,472..473,476..477,479..481,483..484,488,
                     508..509)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381462"
     Site            order(487,490..491,493..494,497,510,513..514,517,519..521,
                     523..524,526..527,530,533..534,537..538,540..542,544..545,
                     547..554)
                     /site_type="other"
                     /note="putative tetramer interface [polypeptide binding]"
                     /db_xref="CDD:381462"
     Site            order(487,490..491,493..494,497,510,513..514,517,519..521,
                     523..524,526..527,530,533..534,537..538,540..541,544,
                     547..548,551..552,554)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381462"
     CDS             1..554
                     /gene="MYCN"
                     /coded_by="XM_061156205.1:35..1699"
                     /db_xref="GeneID:133065458"
ORIGIN      
        1 mrgapgnwvg aelaldrrkr artaatrgpp papghpgtpa qnrlripgsr recwrlarap
       61 alhaphgkea ppelkraerk ealirgpgge pmpsctastm pgmicknpdl efdslqpcfy
      121 pdeddfyfgg pdstppgedi wkkfellptp plspsrafpd hspeppnwat emllpeadlw
      181 gnpaeedafg lgglggltpn pvilqdcmws gfsarekler avseklqhgr ppaagpaapa
      241 pgapsppgrg hgaaasgpgr pgaalpadla hpaaecvdpa vvfpfpvnkr epapvpaspa
      301 gapaagaaia sgagaaapva apvvalprtg grlasasdhk alstsgedtl sdsddedeee
      361 eeeeeeidvv tvekrrssss skavttftit vrpksaalgp graasgelil krcvpihqqh
      421 nyaapspyve seeappqkki kseasprplk svpppkaksl sprnsdseds errrnhnile
      481 rqrrndlrss fltlrdhvpe lvknekaakv vilkkateyv hslqaeehql llekeklqar
      541 qqqllkkieh artc
//
LOCUS       XP_061012189            1152 aa            linear   MAM 02-DEC-2023
DEFINITION  RAD51-associated protein 2 [Dama dama].
ACCESSION   XP_061012189
VERSION     XP_061012189.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156206.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1152
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1152
                     /product="RAD51-associated protein 2"
                     /calculated_mol_wt=133051
     Region          1113..1151
                     /region_name="RAD51_interact"
                     /note="RAD51 interacting motif; pfam15696"
                     /db_xref="CDD:464808"
     CDS             1..1152
                     /gene="RAD51AP2"
                     /coded_by="XM_061156206.1:1..3459"
                     /db_xref="GeneID:133065459"
ORIGIN      
        1 msltqrdpqv selgepvspl ppaddpdslp prrkkprlee pggvsevewr lplvpclsev
       61 ekvwelplrp vkapmistke ifgnatgsca kksvsekqih npeyqnskie mnsclpslps
      121 qnfasgvkas rtscepelyd reifdvhcsd ifeteagqls hasvhdvcvi knedgkqylv
      181 qerdnsqedn ndikltenpf lditfykdtk stfhdiknrc kagsvmpskk kensipastl
      241 kisksqnqps meiakpsyfr dksttsipef ptdlnskmss vylkeigkkn gkneayvrdf
      301 tnihwsqnrp dvkkqklqnd kkivdaenif secyesnhqs lsnqsvcvrk kdliglhyyn
      361 hssiksdaid saknftikle nancketetg lysyiftrle klqnwdcnii yilrknrens
      421 wtvdsykvky enmkkageil nlqqfleidl skgnyhnmkv mkthdekakp lmtetlgsqk
      481 vlkqifclky kgendnmlhf ryyttqkdfh lgssfenlit eifyfhesis gnqkdniliw
      541 cgilkckkqi dvqnlitetm nvntnndiss iclqnnvldl lniilktsit slrndfvsft
      601 ivendsklee gcifkwimyl nypknitven htvdpvrtlt fsrllennmk smlkkrifks
      661 eqifeeskkk ltnsfsmtsk niyfpifety ekipllmdfd dtdeifltke isyknqncpq
      721 qimsvenwvh cssktnkthv rscsqftqnw kyinkktyev nvqnqdlyae gkqkhnkiss
      781 fnfnyifkdf fntrqqalqa shdkkhseqt npmtvtqvld fgnlineiec kkydltlkee
      841 ekitaqnltn fcqgyedikt ekeeknsfys tddtfivqpv slmtkldmee tkyvnqsnvv
      901 drneyesifq eseladskhf hpkndssecf nhqfethlsv gnnecfqdlt akclstdilt
      961 iannfemksk fnlvleelrm fheiskenei lstvetnnrq enyfvgsnav eevkigikkg
     1021 lkmgtenklc sssllgdmia spnmhkkhqs lfkwktvpkn geqevpndcc lrtpeeesly
     1081 stskegcenp sperptffsd efkgekfnyl lkagssfsyg isrvlplktc srpvriglsr
     1141 kakvkqlhpy lk
//
LOCUS       XP_061012190             191 aa            linear   MAM 02-DEC-2023
DEFINITION  visinin-like protein 1 [Dama dama].
ACCESSION   XP_061012190
VERSION     XP_061012190.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156207.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..191
                     /product="visinin-like protein 1"
                     /calculated_mol_wt=22011
     Region          21..177
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..191
                     /gene="VSNL1"
                     /coded_by="XM_061156207.1:349..924"
                     /db_xref="GeneID:133065460"
ORIGIN      
        1 mgkqnsklap evmedlvkst efnehelkqw ykgflkdcps grlnleefqq lyvkffpygd
       61 askfaqhafr tfdkngdgti dfreficals itsrgsfeqk lnwafnmydl dgdgkitrve
      121 mleiieaiyk mvgtvimmkm nedgltpeqr vdkifskmdk nkddqitlde fkeaaksdps
      181 ivlllqcdiq k
//
LOCUS       XP_061012191             191 aa            linear   MAM 02-DEC-2023
DEFINITION  visinin-like protein 1 [Dama dama].
ACCESSION   XP_061012191
VERSION     XP_061012191.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156208.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..191
                     /product="visinin-like protein 1"
                     /calculated_mol_wt=22011
     Region          21..177
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..191
                     /gene="VSNL1"
                     /coded_by="XM_061156208.1:50..625"
                     /db_xref="GeneID:133065460"
ORIGIN      
        1 mgkqnsklap evmedlvkst efnehelkqw ykgflkdcps grlnleefqq lyvkffpygd
       61 askfaqhafr tfdkngdgti dfreficals itsrgsfeqk lnwafnmydl dgdgkitrve
      121 mleiieaiyk mvgtvimmkm nedgltpeqr vdkifskmdk nkddqitlde fkeaaksdps
      181 ivlllqcdiq k
//
LOCUS       XP_061012192             193 aa            linear   MAM 02-DEC-2023
DEFINITION  mesogenin-1 [Dama dama].
ACCESSION   XP_061012192
VERSION     XP_061012192.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156209.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..193
                     /product="mesogenin-1"
                     /calculated_mol_wt=20681
     Region          118..183
                     /region_name="bHLH_TS_Msgn1"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     mesogenin-1 (Msgn1) and similar proteins; cd18939"
                     /db_xref="CDD:381509"
     Site            order(126,130,132..134,136,141,161..164)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381509"
     Site            order(139..140,143..144,146..147,165,168,172,174..175,179,
                     181..182)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381509"
     CDS             1..193
                     /gene="MSGN1"
                     /coded_by="XM_061156209.1:1..582"
                     /db_xref="GeneID:133065462"
ORIGIN      
        1 mdnlretfls ledglgssds pgllsswdwk dragsfeltq aspaqslspa pslesysssp
       61 cpavaglacg hggansrggd dcsglgtsgl vevdydmlaf ppaylqgssg tkaqkgtkvr
      121 msvqrrrkas ereklrmrtl adalhtlrny lppvysqrgq pltkiqtlky tikyigeltd
      181 llnsgreprp qsa
//
LOCUS       XP_061012193             108 aa            linear   MAM 02-DEC-2023
DEFINITION  peptidyl-prolyl cis-trans isomerase FKBP1B isoform X1 [Dama dama].
ACCESSION   XP_061012193
VERSION     XP_061012193.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156210.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..108
                     /product="peptidyl-prolyl cis-trans isomerase FKBP1B
                     isoform X1"
                     /calculated_mol_wt=11651
     Region          13..105
                     /region_name="FKBP_C"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
                     pfam00254"
                     /db_xref="CDD:459735"
     CDS             1..108
                     /gene="FKBP1B"
                     /coded_by="XM_061156210.1:133..459"
                     /db_xref="GeneID:133065466"
ORIGIN      
        1 mgveietisp gdgrtfpkkg qtcvvhytgm lqngkkfdss rdrnkpfkfr igkqevikgf
       61 eegaaqmslg qrakltctpd vaygatghpg vippnatlif dvellnle
//
LOCUS       XP_061012194              92 aa            linear   MAM 02-DEC-2023
DEFINITION  peptidyl-prolyl cis-trans isomerase FKBP1B isoform X2 [Dama dama].
ACCESSION   XP_061012194
VERSION     XP_061012194.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156211.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..92
                     /product="peptidyl-prolyl cis-trans isomerase FKBP1B
                     isoform X2"
                     /calculated_mol_wt=9847
     Region          6..89
                     /region_name="FKBP_C"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
                     pfam00254"
                     /db_xref="CDD:459735"
     CDS             1..92
                     /gene="FKBP1B"
                     /coded_by="XM_061156211.1:136..414"
                     /db_xref="GeneID:133065466"
ORIGIN      
        1 mgveietisp gdgmlqngkk fdssrdrnkp fkfrigkqev ikgfeegaaq mslgqraklt
       61 ctpdvaygat ghpgvippna tlifdvelln le
//
LOCUS       XP_061012195              80 aa            linear   MAM 02-DEC-2023
DEFINITION  peptidyl-prolyl cis-trans isomerase FKBP1B isoform X3 [Dama dama].
ACCESSION   XP_061012195
VERSION     XP_061012195.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156212.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..80
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..80
                     /product="peptidyl-prolyl cis-trans isomerase FKBP1B
                     isoform X3"
                     /calculated_mol_wt=8671
     Region          3..>63
                     /region_name="FkpA"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG0545"
                     /db_xref="CDD:440311"
     CDS             1..80
                     /gene="FKBP1B"
                     /coded_by="XM_061156212.1:137..379"
                     /db_xref="GeneID:133065466"
ORIGIN      
        1 mgveietisp gdgrtfpkkg qtcvvhytgm lqngkkfdss rdrnkpfkfr igkqevikgf
       61 eegaaqlgpl splpicphpc
//
LOCUS       XP_061012196              79 aa            linear   MAM 02-DEC-2023
DEFINITION  peptidyl-prolyl cis-trans isomerase FKBP1B isoform X4 [Dama dama].
ACCESSION   XP_061012196
VERSION     XP_061012196.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156213.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..79
                     /product="peptidyl-prolyl cis-trans isomerase FKBP1B
                     isoform X4"
                     /calculated_mol_wt=8561
     Region          1..76
                     /region_name="FKBP_C"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
                     pfam00254"
                     /db_xref="CDD:459735"
     CDS             1..79
                     /gene="FKBP1B"
                     /coded_by="XM_061156213.1:183..422"
                     /db_xref="GeneID:133065466"
ORIGIN      
        1 mlqngkkfds srdrnkpfkf rigkqevikg feegaaqmsl gqrakltctp dvaygatghp
       61 gvippnatli fdvellnle
//
LOCUS       XP_061012197             265 aa            linear   MAM 02-DEC-2023
DEFINITION  pro-opiomelanocortin [Dama dama].
ACCESSION   XP_061012197
VERSION     XP_061012197.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156214.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..265
                     /product="pro-opiomelanocortin"
                     /calculated_mol_wt=29146
     Region          28..70
                     /region_name="NPP"
                     /note="Pro-opiomelanocortin, N-terminal region; pfam08384"
                     /db_xref="CDD:429962"
     Region          74..91
                     /region_name="ACTH_domain"
                     /note="Corticotropin ACTH domain; pfam00976"
                     /db_xref="CDD:460014"
     Region          132..150
                     /region_name="ACTH_domain"
                     /note="Corticotropin ACTH domain; pfam00976"
                     /db_xref="CDD:460014"
     Region          216..234
                     /region_name="ACTH_domain"
                     /note="Corticotropin ACTH domain; pfam00976"
                     /db_xref="CDD:460014"
     Region          235..262
                     /region_name="Op_neuropeptide"
                     /note="Opioids neuropeptide; pfam08035"
                     /db_xref="CDD:462343"
     CDS             1..265
                     /gene="POMC"
                     /coded_by="XM_061156214.1:1..798"
                     /db_xref="GeneID:133065469"
ORIGIN      
        1 mprlcssrsg alllalllqa smevrgwcle ssqcqdltte snllacirac kpdlsaetpv
       61 fpgngdeqpl tenprkyvmg hfrwdrfgrr ngssssssgf ggaaqkreee vavgegpgpr
      121 gdgaetgpre dkrsysmehf rwgkpvgkkr rpvkvypnga edesaqafpl efkreltger
      181 leqargpepq aesaaarael eyglvaeaea aekkdegpyk mehfrwgspp kdkryggfmt
      241 seksltplvt lfknaiikna hkkgq
//
LOCUS       XP_061012198              33 aa            linear   MAM 02-DEC-2023
DEFINITION  dolichyl-diphosphooligosaccharide--protein glycosyltransferase
            subunit 4-like [Dama dama].
ACCESSION   XP_061012198
VERSION     XP_061012198.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156215.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..33
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..33
                     /product="dolichyl-diphosphooligosaccharide--protein
                     glycosyltransferase subunit 4-like"
                     /calculated_mol_wt=3693
     Region          1..30
                     /region_name="Ost4"
                     /note="Oligosaccaryltransferase; pfam10215"
                     /db_xref="CDD:431142"
     CDS             1..33
                     /gene="LOC133065470"
                     /coded_by="XM_061156215.1:1..102"
                     /db_xref="GeneID:133065470"
ORIGIN      
        1 mitdvqlaif anmlfllvvl yhhvainnpk kqe
//
LOCUS       XP_061012199             201 aa            linear   MAM 02-DEC-2023
DEFINITION  ciliary microtubule inner protein 2C [Dama dama].
ACCESSION   XP_061012199
VERSION     XP_061012199.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156216.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..201
                     /product="ciliary microtubule inner protein 2C"
                     /calculated_mol_wt=23271
     Region          19..85
                     /region_name="DUF2475"
                     /note="Protein of unknown function (DUF2475); pfam10629"
                     /db_xref="CDD:431404"
     CDS             1..201
                     /gene="CIMIP2C"
                     /coded_by="XM_061156216.1:1..606"
                     /db_xref="GeneID:133065471"
ORIGIN      
        1 masrsagtll tefnaayvpp glmpgykghv pgvafsfgsp ygtttlkyfq dqrnaalgrs
       61 stdfskgghf ptifspnptq vlrdraltrd rwlhtpsytr fnldssrwae lsyfyqmaqq
      121 hreqyqdktg lvhrvpyfvl pmrewdrypi ptdlpplspk ekwhllrvap enlrtyqtfp
      181 sgkrvspqer qrrdcyfefr a
//
LOCUS       XP_061012200             185 aa            linear   MAM 02-DEC-2023
DEFINITION  calcium and integrin-binding family member 4 [Dama dama].
ACCESSION   XP_061012200
VERSION     XP_061012200.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156217.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..185
                     /product="calcium and integrin-binding family member 4"
                     /calculated_mol_wt=21548
     Region          101..168
                     /region_name="EF-hand_7"
                     /note="EF-hand domain pair; pfam13499"
                     /db_xref="CDD:463900"
     CDS             1..185
                     /gene="CIB4"
                     /coded_by="XM_061156217.1:1..558"
                     /db_xref="GeneID:133065472"
ORIGIN      
        1 mgqclryqmh wedleeyqal tfltrneilc ihdsflklcp pgkyykeatl tvdqvsslpa
       61 lrvnpfrdri crvfshnnvf sfedvlgmas vfseqacpsl kieyafriyd fnengfidee
      121 dlqriilrll nsddmsedll tdltshvlne sdldndnmls fsefehamak spdfmnsfri
      181 hfwgc
//
LOCUS       XP_061012201             400 aa            linear   MAM 02-DEC-2023
DEFINITION  potassium channel subfamily K member 3 [Dama dama].
ACCESSION   XP_061012201
VERSION     XP_061012201.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156218.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..400
                     /product="potassium channel subfamily K member 3"
                     /calculated_mol_wt=43866
     Region          <73..132
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     Region          167..243
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     CDS             1..400
                     /gene="KCNK3"
                     /coded_by="XM_061156218.1:1..1203"
                     /db_xref="GeneID:133065473"
ORIGIN      
        1 mkrqnvrtla livctftyll vgaavfdale sepemierqr lelrqqelra rynlsqggye
       61 elervvlrlk phkagvqwrf agsfyfaitv ittigyghaa pstdggkvfc mfyallgipl
      121 tlvmfqslge rintfvkyll hrakrglgmq radvsmanmv ligffscist lcigaaafsy
      181 yehwtffqay yycfitltti gfgdyvalqk dqalqtqpqy vafsfvyilt gltvigafln
      241 lvvlrfmtmn aedekrdaeh ralltrngqa ggaggagggg gsahttdtts staagggggg
      301 gfrnvyaevl hfqsmcsclw yksreklqys ipmiiprdls tsdtcveqsh sspggggrys
      361 dtpshrclcs gaqrsaissv stglhslstf rslmkrrssv
//
LOCUS       XP_061012202             214 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor 23 [Dama dama].
ACCESSION   XP_061012202
VERSION     XP_061012202.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156219.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..214
                     /product="transcription factor 23"
                     /calculated_mol_wt=23135
     Region          78..133
                     /region_name="bHLH_SF"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     cl00081"
                     /db_xref="CDD:469605"
     Site            order(85..86,88,93,113..114)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381392"
     Site            order(91..92,95..96,98..99,103,114..115,118..119,122,
                     124..125,128..129)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381392"
     CDS             1..214
                     /gene="TCF23"
                     /coded_by="XM_061156219.1:171..815"
                     /db_xref="GeneID:133065476"
ORIGIN      
        1 maqreargar ampglgqspa katprlsagt erkrnrlsrt gqdlweessw snqrwsraal
       61 nprgararsl argrseaspe naarersrvr tlrqaflalq atlpavppdt klskldvlvl
      121 atsyiahltr tlgqempgpa wppflrglry lhplkkwpmr srlyagglgc sgldsttasn
      181 sgqrtkeaea gpqisgeada llptrplspa pgdk
//
LOCUS       XP_061012203             388 aa            linear   MAM 02-DEC-2023
DEFINITION  probable proton-coupled zinc antiporter SLC30A3 isoform X1 [Dama
            dama].
ACCESSION   XP_061012203
VERSION     XP_061012203.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156220.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..388
                     /product="probable proton-coupled zinc antiporter SLC30A3
                     isoform X1"
                     /calculated_mol_wt=41639
     Region          50..371
                     /region_name="CzcD"
                     /note="Co/Zn/Cd efflux system component [Inorganic ion
                     transport and metabolism]; COG1230"
                     /db_xref="CDD:440843"
     CDS             1..388
                     /gene="SLC30A3"
                     /coded_by="XM_061156220.1:142..1308"
                     /db_xref="GeneID:133065477"
ORIGIN      
        1 mepspttggs ettrlvgprd rggaggglrl kslfteapep lpeepkpmem sfhhchrdpl
       61 pqpgltperm qaqrqlctac avccvfmage vvggylahsl aimtdaahll advgsmmgsl
      121 fslwlstrpa trtmtfgwhr setlgalasv vslwmvtgil lylafirllh sdyhieggam
      181 lltasiavca nllmafvlhq agpphshgsr gaeyapleeg sgeslplgnt svraafvhvl
      241 gdllqslgvl iasiliyfkp qykaadpist flfsicalgs taptlrdvlr vlmegtprsv
      301 gfepvrdtll svpgvrathe lhlwsltfth yvasahlaid saadpeavla eatsrlhsrf
      361 gfssctlqve qyqpemaqcl rcqeppqa
//
LOCUS       XP_061012204             369 aa            linear   MAM 02-DEC-2023
DEFINITION  probable proton-coupled zinc antiporter SLC30A3 isoform X2 [Dama
            dama].
ACCESSION   XP_061012204
VERSION     XP_061012204.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156221.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..369
                     /product="probable proton-coupled zinc antiporter SLC30A3
                     isoform X2"
                     /calculated_mol_wt=39732
     Region          50..352
                     /region_name="CzcD"
                     /note="Co/Zn/Cd efflux system component [Inorganic ion
                     transport and metabolism]; COG1230"
                     /db_xref="CDD:440843"
     CDS             1..369
                     /gene="SLC30A3"
                     /coded_by="XM_061156221.1:142..1251"
                     /db_xref="GeneID:133065477"
ORIGIN      
        1 mepspttggs ettrlvgprd rggaggglrl kslfteapep lpeepkpmem sfhhchrdpl
       61 pqpgltperm qaqrqlctac avccvfmage vvdvgsmmgs lfslwlstrp atrtmtfgwh
      121 rsetlgalas vvslwmvtgi llylafirll hsdyhiegga mlltasiavc anllmafvlh
      181 qagpphshgs rgaeyaplee gsgeslplgn tsvraafvhv lgdllqslgv liasiliyfk
      241 pqykaadpis tflfsicalg staptlrdvl rvlmegtprs vgfepvrdtl lsvpgvrath
      301 elhlwsltft hyvasahlai dsaadpeavl aeatsrlhsr fgfssctlqv eqyqpemaqc
      361 lrcqeppqa
//
LOCUS       XP_061012206             192 aa            linear   MAM 02-DEC-2023
DEFINITION  dnaJ homolog subfamily C member 5G [Dama dama].
ACCESSION   XP_061012206
VERSION     XP_061012206.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156223.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..192
                     /product="dnaJ homolog subfamily C member 5G"
                     /calculated_mol_wt=21645
     Region          19..>100
                     /region_name="PRK10767"
                     /note="chaperone protein DnaJ; Provisional"
                     /db_xref="CDD:236757"
     CDS             1..192
                     /gene="DNAJC5G"
                     /coded_by="XM_061156223.1:1..579"
                     /db_xref="GeneID:133065478"
ORIGIN      
        1 mahvdeaarr lsksgstlya vlelkkgasp edvkkayrfr hqpliahpsf gyclarrlal
       61 kyhpdknpgd aqaaeifkei ntahsvlsdp kkrkiydrhg slgiyiydhf geegvtyyft
      121 mnscwfktli llcalltccc ccccccfccg tlkpppeeat nkkyasnvqh qpprsgrreh
      181 frreedgssd dn
//
LOCUS       XP_061012207             366 aa            linear   MAM 02-DEC-2023
DEFINITION  tripartite motif-containing protein 54 [Dama dama].
ACCESSION   XP_061012207
VERSION     XP_061012207.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156224.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..366
                     /product="tripartite motif-containing protein 54"
                     /calculated_mol_wt=41229
     Region          24..82
                     /region_name="RING-HC_MuRF3"
                     /note="RING finger, HC subclass, found in muscle-specific
                     RING finger protein 3 (MuRF-3) and similar proteins;
                     cd16761"
                     /db_xref="CDD:319675"
     Region          124..166
                     /region_name="Bbox2_MuRF3_C-II"
                     /note="B-box-type 2 zinc finger found in muscle-specific
                     RING finger protein 3 (MuRF-3) and similar proteins;
                     cd19833"
                     /db_xref="CDD:380891"
     Region          188..282
                     /region_name="CC_brat-like"
                     /note="coiled-coil (CC) domain of Drosophila brain tumor
                     (brat) and similar proteins; cl29238"
                     /db_xref="CDD:475168"
     CDS             1..366
                     /gene="TRIM54"
                     /coded_by="XM_061156224.1:1..1101"
                     /db_xref="GeneID:133065479"
ORIGIN      
        1 mnftvgfkpl lgdahsmdnl ekqlicpicl emfskpvvil pcqhnlcrkc andvfqasnp
       61 lwqsrssttv ssggrfrcps crhevvldrh gvyglqrnll veniidiykq essrplhska
      121 eqhlmceehe dekiniycls cevptcslck vfgahkdcev aplptiykrq kselsdgiam
      181 lvagndrvqa vitqmeevcq tieensrrqk qllnqrfegl cavleerkge llqalakeqe
      241 eklqrvrgli rqygdhleas sklvesaiqs meepqmalyl qqakelinkv gtmskvelag
      301 rpepgyermd qftvsvehva emlrtidfqp gtsgeeedee vavegeeghv gpeeertdgr
      361 estgqh
//
LOCUS       XP_061012208             129 aa            linear   MAM 02-DEC-2023
DEFINITION  urocortin [Dama dama].
ACCESSION   XP_061012208
VERSION     XP_061012208.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156225.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..129
                     /product="urocortin"
                     /calculated_mol_wt=14278
     Region          90..127
                     /region_name="CRF"
                     /note="Corticotropin-releasing factor family; pfam00473"
                     /db_xref="CDD:425703"
     CDS             1..129
                     /gene="UCN"
                     /coded_by="XM_061156225.1:1..390"
                     /db_xref="GeneID:133065480"
ORIGIN      
        1 mrpagrvalv aallllaqlr pgssqwspee eaavagvrdp slrwspgtrn hgggaralll
       61 llaerfprrr veqgrwesgt agerprrddp plsidltfhl lrtllelart qsqreraeqn
      121 riifdsvgk
//
LOCUS       XP_061012209             230 aa            linear   MAM 02-DEC-2023
DEFINITION  fibronectin type III domain-containing protein 4 [Dama dama].
ACCESSION   XP_061012209
VERSION     XP_061012209.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156226.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..230
                     /product="fibronectin type III domain-containing protein
                     4"
                     /calculated_mol_wt=24721
     Region          43..133
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(43,106,121)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(122..123,125..126)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     CDS             1..230
                     /gene="FNDC4"
                     /coded_by="XM_061156226.1:166..858"
                     /db_xref="GeneID:133065481"
ORIGIN      
        1 mprclpadsv gtmaslmpls pylsptvlll vscdlgfvra drppspvnvt vthlransat
       61 vswdvpegni vigysisqqr qngpgqrvir evntttraca lwglaedsdy tvqvrsiglr
      121 gesppgprvh frtlkgsdrl psnssspgdi tvegldgerp lqtgevviiv vvllmwaavi
      181 glfcrqydii kdndsnnnpk ekgkgpeqsp qgrpvgtrqk kspsintidv
//
LOCUS       XP_061012210              79 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein uL16-like [Dama dama].
ACCESSION   XP_061012210
VERSION     XP_061012210.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156227.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..79
                     /product="large ribosomal subunit protein uL16-like"
                     /calculated_mol_wt=9057
     Region          <1..74
                     /region_name="Ribosomal_L16_L10e"
                     /note="L16 is an essential protein in the large ribosomal
                     subunit of bacteria, mitochondria, and chloroplasts. Large
                     subunits that lack L16 are defective in peptidyl
                     transferase activity, peptidyl-tRNA hydrolysis activity,
                     association with the 30S subunit; cl00353"
                     /db_xref="CDD:469737"
     CDS             1..79
                     /gene="LOC133065482"
                     /coded_by="XM_061156227.1:51..290"
                     /db_xref="GeneID:133065482"
ORIGIN      
        1 msirtklqnk ehvvealrqa kfkfpgrqki hiskkwgftk fnadefenmv aemrlipdgc
       61 gvkyipncgp ldkwqalhs
//
LOCUS       XP_061012211             149 aa            linear   MAM 02-DEC-2023
DEFINITION  craniofacial development protein 2-like [Dama dama].
ACCESSION   XP_061012211
VERSION     XP_061012211.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156228.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..149
                     /product="craniofacial development protein 2-like"
                     /calculated_mol_wt=16652
     Region          6..>139
                     /region_name="EEP"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; cl00490"
                     /db_xref="CDD:469791"
     CDS             1..149
                     /gene="LOC133065484"
                     /coded_by="XM_061156228.1:274..723"
                     /db_xref="GeneID:133065484"
ORIGIN      
        1 mskgilevvk qeiarvnidi lgiselkwtg mgefnsddhy iyycgqeslr rngvaiivnk
       61 rvrnavlgcn lkndrmisvr fqgkpfnimv ihayavtsna eeaevewfye dlrdlleltp
      121 kkdvlfiign wnakvgsqet pgvtggsci
//
LOCUS       XP_061012213             458 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: protein adenylyltransferase FICD-like [Dama
            dama].
ACCESSION   XP_061012213
VERSION     XP_061012213.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156230.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..458
                     /product="LOW QUALITY PROTEIN: protein adenylyltransferase
                     FICD-like"
                     /calculated_mol_wt=51694
     Region          <105..>184
                     /region_name="NlpI"
                     /note="Lipoprotein NlpI, contains TPR repeats [Cell
                     wall/membrane/envelope biogenesis]; COG4785"
                     /db_xref="CDD:443815"
     Region          106..134
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(107,110..111,114..115,117,141,144..145,148..149,
                     151..152,175,178..179,182..183,186)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          139..169
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          198..>430
                     /region_name="COG3177"
                     /note="Fic family protein [Transcription]"
                     /db_xref="CDD:442410"
     CDS             1..458
                     /gene="LOC133065487"
                     /coded_by="XM_061156230.1:1..1377"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /db_xref="GeneID:133065487"
ORIGIN      
        1 mtltpmasvm avtepkwvsv wgrflwemll smvlgsllal llplgtveeh cltvlkgfyl
       61 lrskleraqp aitkctrpst elsltsrgaa plgvktkasp agkleakaal nqalemkrxg
      121 krqkahklfl hslkmdpgfv dalnefsifs eedkdiiqad ylytraltia phhekalvnr
      181 drtlplveei dqrffsiids kvkkvmsipk gnsalrrvme etyyhhiyht vaiegntltl
      241 seirhiletr yavpgkslee qnkvigvhaa mtyvnttlls rvgsvsigdv leihrrvlgy
      301 vdpveagrfr tmqvlvghhi ppppqevekq mqefvqwfis edamnlhpve faalahyklv
      361 yihpfidrng rtlrllmnli lmqagyppit irkeqrseyy hvlevanegd vrpfirfiak
      421 ctettldtll fvtteypval pearpnhsgf ketlpvkp
//
LOCUS       XP_061012214             991 aa            linear   MAM 02-DEC-2023
DEFINITION  TOG array regulator of axonemal microtubules protein 2 isoform X1
            [Dama dama].
ACCESSION   XP_061012214
VERSION     XP_061012214.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156231.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..991
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..991
                     /product="TOG array regulator of axonemal microtubules
                     protein 2 isoform X1"
                     /calculated_mol_wt=107447
     Region          <3..318
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <272..413
                     /region_name="DUF959"
                     /note="Domain of Unknown Function (DUF959); pfam06121"
                     /db_xref="CDD:399255"
     Region          502..670
                     /region_name="CLASP_N"
                     /note="CLASP N terminal; pfam12348"
                     /db_xref="CDD:432496"
     CDS             1..991
                     /gene="TOGARAM2"
                     /coded_by="XM_061156231.1:1..2976"
                     /db_xref="GeneID:133065488"
ORIGIN      
        1 mgtrgdvppa kvpapvavyc gsdpqssagp lalpggssds slktfgeasl qpvpsallek
       61 psqllsgrgd pgslkldapl kgwqarnghp rnletlslgp hplvplpsle seansvardt
      121 tqikdklkkr rlseglaass catldpgggp kgvplrtaip ratslrllrv srpmppiqsi
      181 pttpeasgak ekglgpptsc qgpqelrpga qevqisqqyl hcndekmhks lggivispis
      241 ktkvpagtsc tpgslpsllp lgqdiltglr ppatrlvpeh gpqektprsl eprplippvr
      301 drsaapekpa lplsqsapml tsfsfshake ahpllkeedq kgsgtkiqvt iarsaqekmr
      361 lkqmkemelf rrakeperdr eltsqslgsr rtlmkegllp lrgsgtlsvp tglssprrnn
      421 lgvtlrkras raslpsipis kqepsfarha saqslpavlt lgspeweeee eetdlrafre
      481 lrpfsnpelg lvdalqcles sdwqmkergl vsiqrlaach sevlagrlhd vslavtgevt
      541 nlrskvsrla igtlgdlfra lkknmdqeae eitrcllqkm antsgfiqra anrslgamve
      601 hvtparslva ltsvgiyhrn plvrkctaeh lsvvleqiga ekllsgtrds tdmlvhnlvr
      661 laqdsnqdtr fygrkmvnil msntkfdafl kqslpshdlq kvmtaikqqg leggneipsa
      721 kdrkvsrslm vyenglpgqd glssngpwlv glrssirggl emveqlrelt rlleakeyqs
      781 rmegvgrlve hcrakpelii anlvqvfdaf tprlqdsnkk vnqwalesla kmipllresl
      841 qpmllsiiia vadnlnskna giyaaaatal damvesldnl gllqmfagrv rflsgravld
      901 vterlselva svyprkpqav erhvlpvlwh flssmtgsga lpghsgnvrt avcrlcrslq
      961 eqmgsrlqdl aagqpkqvlk tlqelldses p
//
LOCUS       XP_061012215             936 aa            linear   MAM 02-DEC-2023
DEFINITION  TOG array regulator of axonemal microtubules protein 2 isoform X2
            [Dama dama].
ACCESSION   XP_061012215
VERSION     XP_061012215.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156232.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..936
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..936
                     /product="TOG array regulator of axonemal microtubules
                     protein 2 isoform X2"
                     /calculated_mol_wt=101671
     Region          <3..318
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          447..615
                     /region_name="CLASP_N"
                     /note="CLASP N terminal; pfam12348"
                     /db_xref="CDD:432496"
     CDS             1..936
                     /gene="TOGARAM2"
                     /coded_by="XM_061156232.1:1..2811"
                     /db_xref="GeneID:133065488"
ORIGIN      
        1 mgtrgdvppa kvpapvavyc gsdpqssagp lalpggssds slktfgeasl qpvpsallek
       61 psqllsgrgd pgslkldapl kgwqarnghp rnletlslgp hplvplpsle seansvardt
      121 tqikdklkkr rlseglaass catldpgggp kgvplrtaip ratslrllrv srpmppiqsi
      181 pttpeasgak ekglgpptsc qgpqelrpga qevqisqqyl hcndekmhks lggivispis
      241 ktkvpagtsc tpgslpsllp lgqdiltglr ppatrlvpeh gpqektprsl eprplippvr
      301 drsaapekpa lplsqsapml tsfsfshake ahpllkeedq kgsgtkiqvt iarsaqekmr
      361 lkqmkemelf rrakeperdr eltsqslgsr rtlmkeaqsl pavltlgspe weeeeeetdl
      421 rafrelrpfs npelglvdal qclessdwqm kerglvsiqr laachsevla grlhdvslav
      481 tgevtnlrsk vsrlaigtlg dlfralkknm dqeaeeitrc llqkmantsg fiqraanrsl
      541 gamvehvtpa rslvaltsvg iyhrnplvrk ctaehlsvvl eqigaeklls gtrdstdmlv
      601 hnlvrlaqds nqdtrfygrk mvnilmsntk fdaflkqslp shdlqkvmta ikqqgleggn
      661 eipsakdrkv srslmvyeng lpgqdglssn gpwlvglrss irgglemveq lreltrllea
      721 keyqsrmegv grlvehcrak peliianlvq vfdaftprlq dsnkkvnqwa leslakmipl
      781 lreslqpmll siiiavadnl nsknagiyaa aataldamve sldnlgllqm fagrvrflsg
      841 ravldvterl selvasvypr kpqaverhvl pvlwhflssm tgsgalpghs gnvrtavcrl
      901 crslqeqmgs rlqdlaagqp kqvlktlqel ldsesp
//
LOCUS       XP_061012216             799 aa            linear   MAM 02-DEC-2023
DEFINITION  TOG array regulator of axonemal microtubules protein 2 isoform X3
            [Dama dama].
ACCESSION   XP_061012216
VERSION     XP_061012216.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156233.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..799
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..799
                     /product="TOG array regulator of axonemal microtubules
                     protein 2 isoform X3"
                     /calculated_mol_wt=86024
     Region          <3..318
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <342..478
                     /region_name="CLASP_N"
                     /note="CLASP N terminal; pfam12348"
                     /db_xref="CDD:432496"
     CDS             1..799
                     /gene="TOGARAM2"
                     /coded_by="XM_061156233.1:1..2400"
                     /db_xref="GeneID:133065488"
ORIGIN      
        1 mgtrgdvppa kvpapvavyc gsdpqssagp lalpggssds slktfgeasl qpvpsallek
       61 psqllsgrgd pgslkldapl kgwqarnghp rnletlslgp hplvplpsle seansvardt
      121 tqikdklkkr rlseglaass catldpgggp kgvplrtaip ratslrllrv srpmppiqsi
      181 pttpeasgak ekglgpptsc qgpqelrpga qevqisqqyl hcndekmhks lggivispis
      241 ktkvpagtsc tpgslpsllp lgqdiltglr ppatrlvpeh gpqektprsl eprplippvr
      301 drsaapekpa lplsqsapml tsfsfshake ahpllkeedq kgsgtkvtnl rskvsrlaig
      361 tlgdlfralk knmdqeaeei trcllqkman tsgfiqraan rslgamvehv tparslvalt
      421 svgiyhrnpl vrkctaehls vvleqigaek llsgtrdstd mlvhnlvrla qdsnqdtrfy
      481 grkmvnilms ntkfdaflkq slpshdlqkv mtaikqqgle ggneipsakd rkvsrslmvy
      541 englpgqdgl ssngpwlvgl rssirgglem veqlreltrl leakeyqsrm egvgrlvehc
      601 rakpeliian lvqvfdaftp rlqdsnkkvn qwaleslakm ipllreslqp mllsiiiava
      661 dnlnsknagi yaaaatalda mvesldnlgl lqmfagrvrf lsgravldvt erlselvasv
      721 yprkpqaver hvlpvlwhfl ssmtgsgalp ghsgnvrtav crlcrslqeq mgsrlqdlaa
      781 gqpkqvlktl qelldsesp
//
LOCUS       XP_061012217            1306 aa            linear   MAM 02-DEC-2023
DEFINITION  photoreceptor cilium actin regulator [Dama dama].
ACCESSION   XP_061012217
VERSION     XP_061012217.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156234.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1306
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1306
                     /product="photoreceptor cilium actin regulator"
                     /calculated_mol_wt=140960
     Region          1..1288
                     /region_name="Retinal"
                     /note="Retinal protein; pfam15449"
                     /db_xref="CDD:464722"
     CDS             1..1306
                     /gene="PCARE"
                     /coded_by="XM_061156234.1:1..3921"
                     /db_xref="GeneID:133065489"
ORIGIN      
        1 mgctpshsdl vnsvaksgiq ffkkpkailp ghqrasargs lpllvqsstc ydpgggssqg
       61 qraeeeqpsp rwtqtvadsl cqltrdptag kakdmerlip ktktspsqln ksqscmatdi
      121 pfkrqsshgs qgaafseees eesntqqtsk wakrpkchrs skqghyrqti lpahesedkv
      181 dfpeplvkah qrtytylhac lskyeavlsi thratqthel lqpmvsflml cfdevnqllg
      241 eiskdgeell qevredlawp lkkgepqeqp dllqqllqyt vsklqelsgt vallssslle
      301 gsgsylhata ghlenklstk rgtderllrt lghleslass hsdpeawglp lcsedsgiga
      361 dsesvqladk lskqascdlv peaaewrpvt sptvearlsg htwqqspfrm gldgpqdcpl
      421 srpptakvhp avqggsgspw psiagpenta srpwglgqst pcgppgmgts gevhlskgsr
      481 cmgtpslseg edssseeeee dkgsctspct wqenashprp rsspasaesp fqphprrlrs
      541 pqaqemvlkm keaiserikf vpvpsehqdw meeedrttvp prpstasgsr rtpsrqrrsq
      601 segclkshte dhtlqelrrv qrdlsqrlea fyiarwqgqs qepvmqprat mlrpdnrcrm
      661 vpssaisklk ssltknfsil pnqdksilqk ccsrpegeqp gqgkaeglpn iippgerage
      721 apgvrdqtir scptrtsvkk lietfspies lrtlgdsrds gpspcpkkwg vptmpprfpi
      781 yrglaplypk prispaagge slrmgpgwrp laptfppllt aeaaksedln weteenpedl
      841 ppppleilmd qsftsleppe sgkqaesple rthvpglggt gsarrtwasp rlrasmsptd
      901 llpskstttl trarsgepgn skgscntgkl aldfnhppaa tgnaevqgsr aqsqvradra
      961 sglskpprkv ihwlhsshts gqsrisepsl srpmrglhsp eaprqtqgrs pvlvrkaspt
     1021 rahwtprvdk rhsglssthr saqpsapcvh gspspplspp vsprvlsppt vkkraspplq
     1081 hklpsppsas plaqhkissp ptqcteagsl asgpspsppa spsqgpketr dsedswaata
     1141 sgntrsifcp atsslfeakl plstvhpltp pslpaeaggp letptggwrg ssgprmrads
     1201 qrgttlcaln pqpfirrtts dprpgvrlhl pvpgatssac esqhgqssgs eespedpepw
     1261 nspcglelkg sgrgapcpel cvlghglqre asaghaqdks qqkevt
//
LOCUS       XP_061012218             167 aa            linear   MAM 02-DEC-2023
DEFINITION  signal peptidase complex catalytic subunit SEC11A-like [Dama dama].
ACCESSION   XP_061012218
VERSION     XP_061012218.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156235.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..167
                     /product="signal peptidase complex catalytic subunit
                     SEC11A-like"
                     /calculated_mol_wt=19059
     Region          26..>138
                     /region_name="Peptidase_S24_S26"
                     /note="The S24, S26 LexA/signal peptidase superfamily
                     contains LexA-related and type I signal peptidase
                     families. The S24 LexA protein domains include: the lambda
                     repressor CI/C2 family and related bacterial prophage
                     repressor proteins; LexA (EC 3.4.21.88), the...; cl10465"
                     /db_xref="CDD:447902"
     Site            order(44,84)
                     /site_type="active"
                     /note="Catalytic site [active]"
                     /db_xref="CDD:119398"
     CDS             1..167
                     /gene="LOC133065490"
                     /coded_by="XM_061156235.1:37..540"
                     /db_xref="GeneID:133065490"
ORIGIN      
        1 mnkrqlyyqv lnfgmivssa lmiwkglmvi tgsespivvv lsgsmepafh rgdllfltnr
       61 vedpirvgei vvfriegrei pivhrvlkih ekqngyikfl tkgdnnavdd rglykqgqhw
      121 lekkdvvgra rgfvpyigiv tilmndypkf kyavlfllgl fvlvhre
//
LOCUS       XP_061012219            1621 aa            linear   MAM 02-DEC-2023
DEFINITION  ALK tyrosine kinase receptor [Dama dama].
ACCESSION   XP_061012219
VERSION     XP_061012219.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156236.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1621
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1621
                     /product="ALK tyrosine kinase receptor"
                     /calculated_mol_wt=175921
     Region          272..430
                     /region_name="MAM"
                     /note="Meprin, A5 protein, and protein tyrosine
                     phosphatase Mu (MAM) domain. MAM is an extracellular
                     domain which mediates protein-protein interactions and is
                     found in a diverse set of proteins, many of which are
                     known to function in cell adhesion. Members...; cd06263"
                     /db_xref="CDD:99706"
     Region          447..473
                     /region_name="LDLa"
                     /note="Low-density lipoprotein receptor domain class A;
                     smart00192"
                     /db_xref="CDD:197566"
     Region          486..641
                     /region_name="MAM"
                     /note="MAM domain, meprin/A5/mu; pfam00629"
                     /db_xref="CDD:459878"
     Region          993..1027
                     /region_name="FXa_inhibition"
                     /note="Coagulation Factor Xa inhibitory site; pfam14670"
                     /db_xref="CDD:464251"
     Region          1115..1391
                     /region_name="PTKc_ALK_LTK"
                     /note="Catalytic domain of the Protein Tyrosine Kinases,
                     Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase;
                     cd05036"
                     /db_xref="CDD:270632"
     Site            order(1128,1130..1131,1136,1154,1156,1202..1206,
                     1208..1209,1255,1259..1260,1262,1275..1276,1294..1298,
                     1307,1341)
                     /site_type="active"
                     /db_xref="CDD:270632"
     Site            order(1128,1130..1131,1136,1154,1156,1202..1206,
                     1208..1209,1259..1260,1262,1275..1276)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270632"
     Site            order(1255,1259,1294..1298,1307,1341)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270632"
     Site            1275..1300
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270632"
     CDS             1..1621
                     /gene="ALK"
                     /coded_by="XM_061156236.1:1..4866"
                     /db_xref="GeneID:133065491"
ORIGIN      
        1 mgaigllwll lllllspaas gsgtgietgq rvgspatgpa lqpreplsys rlqrkslavd
       61 fvvpslfrvy ardlllppps psepragrle argslaldca pllrlvgppp gvswtagass
      121 ptpaqartls rvlkggsirk lrrakqlvle lgeeailegc vgppeeatag llqfnltelf
      181 swwirhgegr lrirlmpekk vsevgregrl saairasqpr llfqifgtgq sslesptnlp
      241 slppdsfawn ltwimkdsfp flshrsrygl ecsfdfpcel eyspplhnlg nqswswrhvs
      301 seeasqmdll dgpeaehske mprgafllln tsanskhtil spwmrssseh crlavsvhrh
      361 lqpsgryvaq llphneagre illvptpgkh gwtvlqgrig rpenpfrval eyisngnrsl
      421 savdffalkn csegtspgsk malqssftcw ngtvlqlgqa cdfhrdcaqg edegqlcrkl
      481 pagfycdfed gfcgwtqssp sphtpqwqvr tlkdarfqdh qghalllsit daptsenatv
      541 tsatfpapmk nspcelrmsw lirgvlqgnv slmlvenktg keqsrmiwhv atleglslwq
      601 wtvlplleva drfwlqivaw wgqgsratva fdnisvsldc yltisgedkm pqntapksrn
      661 lfernlnnel kpwvtpsket pifdptvhwl fttcgasgph gptqaqcnna yrnsnlsvvv
      721 gsegplkgiq twkvpatdty sisgygaagg kggkntmmrs hgvsvlgifn lekddtlyil
      781 vgqqgedacp stnrliqkvc igennvieee irvnksvhew agggggggga tyvfkmkdgv
      841 pvpliiaagg ggraygaktd tfhperlenn ssvlglngns gaagggggws dntsllwsgk
      901 sllegatggh scpqamkkwg wetrggfggg gggcssgggg ggyiggnaas nndpemdged
      961 gvsfinplgi lytpalkvme ghgevnikhy lncshcevde chmdpeshki icfcdhgtvl
     1021 aedgvscivs ptpephlpls lilsvvtsal vaalvlafsg imivyrrkhq elqamqmelq
     1081 speyklsklr tstimtdynp nycfagktss isdlkevprk nitlirglgh gafgevyegq
     1141 vsgmpndpsp lqvavktlpe vcseqdeldf lmealiiskf nhqnivrcig vslqalprfi
     1201 llelmaggdl ksflretrpr pnqpsslaml dllhvardia cgcqyleenh fihrdiaarn
     1261 clltcpgpgr vakigdfgma rdiyrasyyr kggcamlpvk wmppeafmeg iftsktdtws
     1321 fgvllweifs lgympypsks nqevlefvts ggrmdppknc pgpvyrimtq cwqhqpedrp
     1381 nfaiilerie yctqdpdvin talpveygpl veeeekvpmr pqdpegippl lvsaaqakre
     1441 egrepaapaa lpsappgkag kkpaaaeacv rggarppavd gghvnmafsq snppselpqv
     1501 qgsrnkptsl wnptygswft ekptkkntpp akkeqrergp pggegaravp apapaarrpg
     1561 aslllepsal taslrdvplf rlrhfpcgtv nygyqqqgfp peaapgpgry edpapksqpa
     1621 p
//
LOCUS       XP_061012221             115 aa            linear   MAM 02-DEC-2023
DEFINITION  small ribosomal subunit protein eS26-like [Dama dama].
ACCESSION   XP_061012221
VERSION     XP_061012221.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156238.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..115
                     /product="small ribosomal subunit protein eS26-like"
                     /calculated_mol_wt=12811
     Region          1..103
                     /region_name="Ribosomal_S26e"
                     /note="Ribosomal protein S26e; pfam01283"
                     /db_xref="CDD:426179"
     CDS             1..115
                     /gene="LOC133065496"
                     /coded_by="XM_061156238.1:6..353"
                     /db_xref="GeneID:133065496"
ORIGIN      
        1 mtkkrrnngr akkgcghvqp irctncarcv pkdkaikkfv irnileaaai rdiseasvfd
       61 tyvlpklyvk lhycvscaih skvvrnrsre arkdrtplps frpvgaapcp ppkpm
//
LOCUS       XP_061012222             552 aa            linear   MAM 02-DEC-2023
DEFINITION  polypeptide N-acetylgalactosaminyltransferase 14 [Dama dama].
ACCESSION   XP_061012222
VERSION     XP_061012222.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156239.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..552
                     /product="polypeptide N-acetylgalactosaminyltransferase
                     14"
                     /calculated_mol_wt=64337
     Region          114..408
                     /region_name="pp-GalNAc-T"
                     /note="pp-GalNAc-T initiates the formation of mucin-type
                     O-linked glycans; cd02510"
                     /db_xref="CDD:133004"
     Site            order(118..120,122,151,176,179,183,199..201,282..283,
                     305..306,308,333,336,341)
                     /site_type="active"
                     /note="ligand binding site [active]"
                     /db_xref="CDD:133004"
     Site            order(199,201,333)
                     /site_type="active"
                     /note="Mn binding site [active]"
                     /db_xref="CDD:133004"
     Region          413..552
                     /region_name="beta-trefoil_Ricin-like"
                     /note="ricin B-type lectin domain, beta-trefoil fold;
                     cl49609"
                     /db_xref="CDD:483949"
     Site            order(432..434,445,447,459..460)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467356"
     Site            order(478..479,489,491,499..500)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467356"
     Site            order(519..521,534,536,544..545)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467356"
     CDS             1..552
                     /gene="GALNT14"
                     /coded_by="XM_061156239.1:13..1671"
                     /db_xref="GeneID:133065497"
ORIGIN      
        1 mrrlsrrlvl pifgvlwitv llffwvtkkk levptgpevq tpkisdgdwd dlwdqfderr
       61 ylnakkwrvg ddpyklyafn qreseriasn rvvpdtrlfr ctllvygadl pptsiiitfh
      121 nearstllrt vrsilnrtpm nliqeiilvd dfsndpedck qliklpkvkc lrnnerqglv
      181 rsrirgadia qgttltflds hcevnrdwlq pllhrvredy trvvcpvidi ihldtfnyie
      241 saselrggfd wslhfqweql tpeqkarrld ptepirtpii agglfvmdks wfdylgkydt
      301 dmdiwggenf eisfrvwmcg gsleivpcsr vghvfrkkhp yifpdgnant yikntkrtae
      361 vwmdeykqyy yasrpfaler pfgniesrrn lrknlqcqsf kwylenvype lrvpkdssiq
      421 kgsirqrqkc leaqkrkdqe isnlklspcv ktegkdaksq iwaftytqqi lqeelclsvi
      481 tlfpgapvvl vlckngdkrq qwtktgsrie hmashlcldt dmfgdgtets revvvnpces
      541 slmsqhwdlv ss
//
LOCUS       XP_061012223             685 aa            linear   MAM 02-DEC-2023
DEFINITION  calpain-14 isoform X1 [Dama dama].
ACCESSION   XP_061012223
VERSION     XP_061012223.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156240.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..685
                     /product="calpain-14 isoform X1"
                     /calculated_mol_wt=79205
     Region          44..334
                     /region_name="Peptidase_C2"
                     /note="Calpain family cysteine protease; pfam00648"
                     /db_xref="CDD:459889"
     Region          353..491
                     /region_name="Calpain_III"
                     /note="Calpain large subunit, domain III; pfam01067"
                     /db_xref="CDD:460050"
     Site            order(388..390,397)
                     /site_type="other"
                     /note="acidic loop"
                     /db_xref="CDD:238132"
     Region          518..685
                     /region_name="EFh_PEF_CAPN13_14"
                     /note="Penta-EF hand, calcium binding motifs, found in
                     calpain-13 (CAPN13), calpain-14 (CAPN14), and similar
                     proteins; cd16195"
                     /db_xref="CDD:320070"
     Region          518..546
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          561..590
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Site            order(570,574,581)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320070"
     Region          591..621
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          627..655
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          657..685
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     CDS             1..685
                     /gene="CAPN14"
                     /coded_by="XM_061156240.1:139..2196"
                     /db_xref="GeneID:133065498"
ORIGIN      
        1 mamwfpvcrn wklrredsmg hfsqlprqdy ealkerclrd gslfedksfp aslrsigsgp
       61 llrklpsrlq wkrppelhsn plfysakakr ldlcqglvgd cwflaalqal slhqdilsrv
      121 vplnqsfteq yagifqfwfw hfgkwvpvvv ddrlpvneag qlvfvsstyk nlfwgallek
      181 ayaklsgsye dlqrgqvsea lvdftggvtm tinlaeapdn lwdvltraac srtligcqth
      241 cgqrvlengl vdghaytltg iwkvttrhgp eylvklrnpw gkiewrgdws dsssmwdlls
      301 pkekimllrk dddgefwmsl rdfkahfmll vicklspgll tqevgqkwsy tllegrwkng
      361 staggqmksp rdtfwknpqf llsvwrpqeg rrsqmlcsvl vsllqkprhr hrnrkphlai
      421 gfylfrvnqs fdaqkklpse ffwknaslsr pvtfltekev sqelwlepgm yvivpctsea
      481 rqesefvlrv fsrkhifyei gsnssvifsk eivdqsegkd efftklfeky peinaiqlqn
      541 ilnhmpwsgl gskqpffsle acqgilalld lnasgtvsiq efrdlwkqlm fyqevfhkqd
      601 tnrsgslnwa qlraamreag ivlsddvcql mlirygrpdl qmdfvnfvhl mlrvenmedv
      661 fqnltqdgkg iylqkpewlm malyc
//
LOCUS       XP_061012224             509 aa            linear   MAM 02-DEC-2023
DEFINITION  calpain-14 isoform X2 [Dama dama].
ACCESSION   XP_061012224
VERSION     XP_061012224.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156241.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..509
                     /product="calpain-14 isoform X2"
                     /calculated_mol_wt=58575
     Region          <9..158
                     /region_name="Peptidase_C2"
                     /note="Calpain family cysteine protease; pfam00648"
                     /db_xref="CDD:459889"
     Region          177..315
                     /region_name="Calpain_III"
                     /note="Calpain large subunit, domain III; pfam01067"
                     /db_xref="CDD:460050"
     Site            order(212..214,221)
                     /site_type="other"
                     /note="acidic loop"
                     /db_xref="CDD:238132"
     Region          342..509
                     /region_name="EFh_PEF_CAPN13_14"
                     /note="Penta-EF hand, calcium binding motifs, found in
                     calpain-13 (CAPN13), calpain-14 (CAPN14), and similar
                     proteins; cd16195"
                     /db_xref="CDD:320070"
     Region          342..370
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          385..414
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Site            order(394,398,405)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320070"
     Region          415..445
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          451..479
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     Region          481..509
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320070"
     CDS             1..509
                     /gene="CAPN14"
                     /coded_by="XM_061156241.1:1..1530"
                     /db_xref="GeneID:133065498"
ORIGIN      
        1 mlassnsgls gsyedlqrgq vsealvdftg gvtmtinlae apdnlwdvlt raacsrtlig
       61 cqthcgqrvl englvdghay tltgiwkvtt rhgpeylvkl rnpwgkiewr gdwsdsssmw
      121 dllspkekim llrkdddgef wmslrdfkah fmllvickls pglltqevgq kwsytllegr
      181 wkngstaggq mksprdtfwk npqfllsvwr pqegrrsqml csvlvsllqk prhrhrnrkp
      241 hlaigfylfr vnqsfdaqkk lpseffwkna slsrpvtflt ekevsqelwl epgmyvivpc
      301 tsearqesef vlrvfsrkhi fyeigsnssv ifskeivdqs egkdefftkl fekypeinai
      361 qlqnilnhmp wsglgskqpf fsleacqgil alldlnasgt vsiqefrdlw kqlmfyqevf
      421 hkqdtnrsgs lnwaqlraam reagivlsdd vcqlmliryg rpdlqmdfvn fvhlmlrven
      481 medvfqnltq dgkgiylqkp ewlmmalyc
//
LOCUS       XP_061012225             185 aa            linear   MAM 02-DEC-2023
DEFINITION  gastrokine-1 [Dama dama].
ACCESSION   XP_061012225
VERSION     XP_061012225.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156242.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..185
                     /product="gastrokine-1"
                     /calculated_mol_wt=20242
     Region          54..150
                     /region_name="BRICHOS"
                     /note="The BRICHOS domain is found in a variety of
                     proteins implicated in dementia, respiratory distress and
                     cancer; smart01039"
                     /db_xref="CDD:198107"
     CDS             1..185
                     /gene="GKN1"
                     /coded_by="XM_061156242.1:11..568"
                     /db_xref="GeneID:133065502"
ORIGIN      
        1 mkftivfagl lgifltptla gydinvndnn nsggsgqqsv svnnehgvan idnnngwgsw
       61 nslwdygsgf avirsfkkks civhkmnkev mpsiqaldml akknklqgrg pegpppksli
      121 ysvkpdkvnn ldqfgksivt mcqgiptyma eeiqganlil ypekcikvdi fwilnialce
      181 eamen
//
LOCUS       XP_061012226             185 aa            linear   MAM 02-DEC-2023
DEFINITION  gastrokine-1 [Dama dama].
ACCESSION   XP_061012226
VERSION     XP_061012226.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156243.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..185
                     /product="gastrokine-1"
                     /calculated_mol_wt=20242
     Region          54..150
                     /region_name="BRICHOS"
                     /note="The BRICHOS domain is found in a variety of
                     proteins implicated in dementia, respiratory distress and
                     cancer; smart01039"
                     /db_xref="CDD:198107"
     CDS             1..185
                     /gene="GKN1"
                     /coded_by="XM_061156243.1:11..568"
                     /db_xref="GeneID:133065502"
ORIGIN      
        1 mkftivfagl lgifltptla gydinvndnn nsggsgqqsv svnnehgvan idnnngwgsw
       61 nslwdygsgf avirsfkkks civhkmnkev mpsiqaldml akknklqgrg pegpppksli
      121 ysvkpdkvnn ldqfgksivt mcqgiptyma eeiqganlil ypekcikvdi fwilnialce
      181 eamen
//
LOCUS       XP_061012227             184 aa            linear   MAM 02-DEC-2023
DEFINITION  gastrokine-2 [Dama dama].
ACCESSION   XP_061012227
VERSION     XP_061012227.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156244.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..184
                     /product="gastrokine-2"
                     /calculated_mol_wt=20361
     Region          54..149
                     /region_name="BRICHOS"
                     /note="The BRICHOS domain is found in a variety of
                     proteins implicated in dementia, respiratory distress and
                     cancer; smart01039"
                     /db_xref="CDD:198107"
     CDS             1..184
                     /gene="GKN2"
                     /coded_by="XM_061156244.1:15..569"
                     /db_xref="GeneID:133065503"
ORIGIN      
        1 mkifvvfvga laffgtqslg nevyniispt dkggqiqetm tidneknaai inihagscss
       61 ttifdykhgy ialrvlsrra cyilkmdhka ipaldqlkry iferkalnsm fsdkyiwvky
      121 nplkslitnv dwflfgspir qlcehvplyq gevadkthnt gaeacakagl lgilgisvca
      181 dvhv
//
LOCUS       XP_061012229             424 aa            linear   MAM 02-DEC-2023
DEFINITION  bone morphogenetic protein 10 [Dama dama].
ACCESSION   XP_061012229
VERSION     XP_061012229.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156246.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..424
                     /product="bone morphogenetic protein 10"
                     /calculated_mol_wt=48229
     Region          55..256
                     /region_name="TGFb_propeptide"
                     /note="TGF-beta propeptide; cl46657"
                     /db_xref="CDD:480997"
     Region          321..424
                     /region_name="TGF_beta_BMP10"
                     /note="transforming growth factor beta (TGF-beta) like
                     domain found in bone morphogenetic protein 10 (BMP-10) and
                     similar proteins; cd19401"
                     /db_xref="CDD:381671"
     Site            order(328,330,334..335,337,347,349..351,368..369,372..373,
                     375..376,379,383..385,388,390..391,394,414..416,418,424)
                     /site_type="other"
                     /note="putative homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381671"
     CDS             1..424
                     /gene="BMP10"
                     /coded_by="XM_061156246.1:1..1275"
                     /db_xref="GeneID:133065504"
ORIGIN      
        1 mgsvvlqlct lscllvhsvs gnpimsleqs pleedmplfd dvfseqdgvd fntllqsmkn
       61 eflktlnlsd iptqdsakvd ppeymlelyn kfatdrtsmp saniirsfkn edlfsqpasf
      121 nglrkypllf nvsiphhedi imaelrlytl vqrdrliyeg vdrkitifev leskedhege
      181 rsmlvlvsge iygtnsewet fdvtdaikhw qksglsthql evhieskhet edtlgrghle
      241 idtsarnkhd pllvvfsedq ssekerkeel demiaheqfp emdnldldgy sngpgeeall
      301 qmrsniiyds tarirrnakg nyckrtplyi dfkeigwdsw iiappgyeay ecrgvcnypl
      361 aehltptkha iiqalvhlkn sqkaskaccv ptklepisil yldkgvvtyk fkyegmavse
      421 cgcr
//
LOCUS       XP_061012230             114 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein P1-like [Dama dama].
ACCESSION   XP_061012230
VERSION     XP_061012230.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156247.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..114
                     /product="large ribosomal subunit protein P1-like"
                     /calculated_mol_wt=11456
     Region          6..>63
                     /region_name="Ribosomal_P1"
                     /note="Ribosomal protein P1. This subfamily represents the
                     eukaryotic large ribosomal protein P1. Eukaryotic P1 and
                     P2 are functionally equivalent to the bacterial protein
                     L7/L12, but are not homologous to L7/L12. P1 is located in
                     the L12 stalk, with proteins...; cd05831"
                     /db_xref="CDD:100109"
     CDS             1..114
                     /gene="LOC133065511"
                     /coded_by="XM_061156247.1:33..377"
                     /db_xref="GeneID:133065511"
ORIGIN      
        1 masvselaci ysalilhnde vtvtedkina likaasvnve pfwpglfaka lanvnigsli
       61 cnvgaggpap aagaapaggp apatttapae ekkveakkee seesdddmgf glfd
//
LOCUS       XP_061012231             355 aa            linear   MAM 02-DEC-2023
DEFINITION  homeobox protein OTX1 isoform X1 [Dama dama].
ACCESSION   XP_061012231
VERSION     XP_061012231.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156248.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..355
                     /product="homeobox protein OTX1 isoform X1"
                     /calculated_mol_wt=37294
     Region          39..95
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          179..269
                     /region_name="TF_Otx"
                     /note="Otx1 transcription factor; pfam03529"
                     /db_xref="CDD:427350"
     CDS             1..355
                     /gene="OTX1"
                     /coded_by="XM_061156248.1:1..1068"
                     /db_xref="GeneID:133065514"
ORIGIN      
        1 mmsylkqppy gmnglglagp amdllhpsvg ypatprkqrr erttftrsql dvlealfakt
       61 rypdifmree valkinlpes rvqvwfknrr akcrqqqqsg sgtksrpakk ksspvressg
      121 sessgqftpp avsssassss sassasanpa aaaaaglggn pavavpssls tpaassiwsp
      181 asispgsapa svsmpeplaa psnascmqrs vaagaasaaa sypmsygqgg sygqgypaps
      241 ssyfggvdcs sylapmhshh hphqlspmap ssmashhhhh phahhplsqs sghhhhhhhh
      301 hhqgyggsgl afnsadcldy kepgaaaass awklnfnspd cldykdqasw rfqvl
//
LOCUS       XP_061012232             331 aa            linear   MAM 02-DEC-2023
DEFINITION  homeobox protein OTX1 isoform X2 [Dama dama].
ACCESSION   XP_061012232
VERSION     XP_061012232.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156249.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..331
                     /product="homeobox protein OTX1 isoform X2"
                     /calculated_mol_wt=35380
     Region          47..103
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          165..245
                     /region_name="TF_Otx"
                     /note="Otx1 transcription factor; pfam03529"
                     /db_xref="CDD:427350"
     CDS             1..331
                     /gene="OTX1"
                     /coded_by="XM_061156249.1:1..996"
                     /db_xref="GeneID:133065514"
ORIGIN      
        1 mmsylkqppy gmnglglagp amdllhpsvg ypgewvacps atprkqrrer ttftrsqldv
       61 lealfaktry pdifmreeva lkinlpesrv qvwfknrrak crqqqqsgsg tksrpakkks
      121 spvressgse ssgqftppav sslggnpava vpsslstpaa ssiwspasis pgsapasvna
      181 scmqrsvaag aasaaasypm sygqggsygq gypapsssyf ggvdcssyla pmhshhhphq
      241 lspmapssma shhhhhphah hplsqssghh hhhhhhhhqg yggsglafns adcldykepg
      301 aaaassawkl nfnspdcldy kdqaswrfqv l
//
LOCUS       XP_061012233             323 aa            linear   MAM 02-DEC-2023
DEFINITION  homeobox protein OTX1 isoform X3 [Dama dama].
ACCESSION   XP_061012233
VERSION     XP_061012233.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156250.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..323
                     /product="homeobox protein OTX1 isoform X3"
                     /calculated_mol_wt=34550
     Region          39..95
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          157..237
                     /region_name="TF_Otx"
                     /note="Otx1 transcription factor; pfam03529"
                     /db_xref="CDD:427350"
     CDS             1..323
                     /gene="OTX1"
                     /coded_by="XM_061156250.1:1..972"
                     /db_xref="GeneID:133065514"
ORIGIN      
        1 mmsylkqppy gmnglglagp amdllhpsvg ypatprkqrr erttftrsql dvlealfakt
       61 rypdifmree valkinlpes rvqvwfknrr akcrqqqqsg sgtksrpakk ksspvressg
      121 sessgqftpp avsslggnpa vavpsslstp aassiwspas ispgsapasv nascmqrsva
      181 agaasaaasy pmsygqggsy gqgypapsss yfggvdcssy lapmhshhhp hqlspmapss
      241 mashhhhhph ahhplsqssg hhhhhhhhhh qgyggsglaf nsadcldyke pgaaaassaw
      301 klnfnspdcl dykdqaswrf qvl
//
LOCUS       XP_061012235             185 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: uncharacterized protein C2orf74 homolog [Dama
            dama].
ACCESSION   XP_061012235
VERSION     XP_061012235.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156252.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..185
                     /product="LOW QUALITY PROTEIN: uncharacterized protein
                     C2orf74 homolog"
                     /calculated_mol_wt=20626
     Region          28..185
                     /region_name="DUF4642"
                     /note="Domain of unknown function (DUF4642); pfam15484"
                     /db_xref="CDD:464742"
     CDS             1..185
                     /gene="C11H2orf74"
                     /coded_by="XM_061156252.1:1..558"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /db_xref="GeneID:133065515"
ORIGIN      
        1 mnfetteftf fiilliclsc iflllvvfly kcsqsrtdee tekgpctene gedcpatnte
       61 mndldnqekx vctlgcggtp flhgilvqrq skeamttplg nredvegeee nktkekrkpe
      121 nagengqedd ylqkplipvt gspsvvdnhk rplkgvtfsr evivvdlgkd npiarsytrl
      181 hkerk
//
LOCUS       XP_061012236             124 aa            linear   MAM 02-DEC-2023
DEFINITION  polyadenylate-binding protein-interacting protein 2-like [Dama
            dama].
ACCESSION   XP_061012236
VERSION     XP_061012236.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156253.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..124
                     /product="polyadenylate-binding protein-interacting
                     protein 2-like"
                     /calculated_mol_wt=14521
     Region          108..123
                     /region_name="PAM2"
                     /note="Ataxin-2 C-terminal region; pfam07145"
                     /db_xref="CDD:429316"
     CDS             1..124
                     /gene="LOC133065516"
                     /coded_by="XM_061156253.1:140..514"
                     /db_xref="GeneID:133065516"
ORIGIN      
        1 mkdpsrssts psiinedvii nghsheddnp faeymwmene eefnrqieee lweeefierc
       61 vqemleeeee hewfipardl pqtmdqiqdq fndlvisdgs sledlvvksn lnpnakefvp
      121 gvky
//
LOCUS       XP_061012237             518 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat transmembrane neuronal protein 4 [Dama dama].
ACCESSION   XP_061012237
VERSION     XP_061012237.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156254.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..518
                     /product="leucine-rich repeat transmembrane neuronal
                     protein 4"
                     /calculated_mol_wt=59038
     Region          43..61
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          64..86
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          66..>311
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          87..110
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          111..134
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          135..158
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          159..182
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          183..206
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          207..230
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          231..254
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          255..278
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..518
                     /gene="LRRTM4"
                     /coded_by="XM_061156254.1:362..1918"
                     /db_xref="GeneID:133065518"
ORIGIN      
        1 mgfhlitqlr smrvvlvllp tlllvmltga qracpkncrc dgkivycesh afadipenis
       61 ggsqglslrf nsiqklksnq faslnqliwl yldhnyissv dedafqgirr lkelilssnk
      121 itylhnktfh pvpnlrsldl synklqtlqs eqfkglrkli ilhlrsnslk tvpirvfqdc
      181 rnldfldlgy nrlrslsrna fagllklkel hlehnqfski nfahfprlfn lrsiylqwnr
      241 irsisqgltw twsslhnldl sgndiqgiep gtfkclpnlq klnldsnklt nisqetvnaw
      301 islisitlsg nmwecsrsic plfywlknfk gtkestmica gpkhiqgekv sdavetynic
      361 sevqvvntek shlvpqtpqk pliipkpttl ksdpsrstle tpspspgfqi pgteqeyehv
      421 sfhkiiagsv alflsvamil lviyvswkry pasmkqlqqh slmkrrrkkt reserqmnsp
      481 lqeyyvdykp tnsetmdisv ngsgpctyti sgsrecev
//
LOCUS       XP_061012238             518 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat transmembrane neuronal protein 4 [Dama dama].
ACCESSION   XP_061012238
VERSION     XP_061012238.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156255.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..518
                     /product="leucine-rich repeat transmembrane neuronal
                     protein 4"
                     /calculated_mol_wt=59038
     Region          43..61
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          64..86
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          66..>311
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          87..110
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          111..134
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          135..158
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          159..182
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          183..206
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          207..230
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          231..254
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          255..278
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..518
                     /gene="LRRTM4"
                     /coded_by="XM_061156255.1:292..1848"
                     /db_xref="GeneID:133065518"
ORIGIN      
        1 mgfhlitqlr smrvvlvllp tlllvmltga qracpkncrc dgkivycesh afadipenis
       61 ggsqglslrf nsiqklksnq faslnqliwl yldhnyissv dedafqgirr lkelilssnk
      121 itylhnktfh pvpnlrsldl synklqtlqs eqfkglrkli ilhlrsnslk tvpirvfqdc
      181 rnldfldlgy nrlrslsrna fagllklkel hlehnqfski nfahfprlfn lrsiylqwnr
      241 irsisqgltw twsslhnldl sgndiqgiep gtfkclpnlq klnldsnklt nisqetvnaw
      301 islisitlsg nmwecsrsic plfywlknfk gtkestmica gpkhiqgekv sdavetynic
      361 sevqvvntek shlvpqtpqk pliipkpttl ksdpsrstle tpspspgfqi pgteqeyehv
      421 sfhkiiagsv alflsvamil lviyvswkry pasmkqlqqh slmkrrrkkt reserqmnsp
      481 lqeyyvdykp tnsetmdisv ngsgpctyti sgsrecev
//
LOCUS       XP_061012239             178 aa            linear   MAM 02-DEC-2023
DEFINITION  lithostathine-like [Dama dama].
ACCESSION   XP_061012239
VERSION     XP_061012239.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156256.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..178
                     /product="lithostathine-like"
                     /calculated_mol_wt=19888
     Region          43..176
                     /region_name="CLECT"
                     /note="C-type lectin (CTL)/C-type lectin-like (CTLD)
                     domain; cl02432"
                     /db_xref="CDD:470576"
     Site            order(147,151,153,160,162..165,168..170)
                     /site_type="other"
                     /note="ligand binding surface [chemical binding]"
                     /db_xref="CDD:153057"
     CDS             1..178
                     /gene="LOC133065523"
                     /coded_by="XM_061156256.1:123..659"
                     /db_xref="GeneID:133065523"
ORIGIN      
        1 mdtmlpslgl prlfwmllsc lmllsqvqgv dsqkelrser iscprgstay gsscyvlytl
       61 srswmdanfa cqrrhsghla svlsgtegsf laslvrnnlr tqsnvwiglh dptegfepna
      121 ggwewsstdv lnyfawernp atvsssdhcg ilsrtsgylk wkdyncnvkl pyickfkg
//
LOCUS       XP_061012240             178 aa            linear   MAM 02-DEC-2023
DEFINITION  lithostathine isoform X1 [Dama dama].
ACCESSION   XP_061012240
VERSION     XP_061012240.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156257.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..178
                     /product="lithostathine isoform X1"
                     /calculated_mol_wt=19578
     Region          43..176
                     /region_name="CLECT"
                     /note="C-type lectin (CTL)/C-type lectin-like (CTLD)
                     domain; cl02432"
                     /db_xref="CDD:470576"
     Site            order(147,151,153,160,162..165,168..170)
                     /site_type="other"
                     /note="ligand binding surface [chemical binding]"
                     /db_xref="CDD:153057"
     CDS             1..178
                     /gene="LOC133065524"
                     /coded_by="XM_061156257.1:20..556"
                     /db_xref="GeneID:133065524"
ORIGIN      
        1 mdtmlpslgl prlswmllsc lmllsqvqge nsqkelpsar iscptgsmay rsycyalfkt
       61 pktwmdadia cqkrpsghlv sllngaedsf vaslvknnln tqsdvwigly dptegsepna
      121 ggwewistdv lnyvawetdp aaisspgycg slssssgylk widhncylkl pyvckfkd
//
LOCUS       XP_061012241             132 aa            linear   MAM 02-DEC-2023
DEFINITION  lithostathine isoform X2 [Dama dama].
ACCESSION   XP_061012241
VERSION     XP_061012241.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156258.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..132
                     /product="lithostathine isoform X2"
                     /calculated_mol_wt=14595
     Region          43..130
                     /region_name="CLECT"
                     /note="C-type lectin (CTL)/C-type lectin-like (CTLD)
                     domain; cl02432"
                     /db_xref="CDD:470576"
     Site            order(101,105,107,114,116..119,122..124)
                     /site_type="other"
                     /note="ligand binding surface [chemical binding]"
                     /db_xref="CDD:153057"
     CDS             1..132
                     /gene="LOC133065524"
                     /coded_by="XM_061156258.1:20..418"
                     /db_xref="GeneID:133065524"
ORIGIN      
        1 mdtmlpslgl prlswmllsc lmllsqvqge nsqkelpsar iscptgsmay rsycyalfkt
       61 pktwmdadgs epnaggwewi stdvlnyvaw etdpaaissp gycgslssss gylkwidhnc
      121 ylklpyvckf kd
//
LOCUS       XP_061012242             139 aa            linear   MAM 02-DEC-2023
DEFINITION  histone H2AX-like [Dama dama].
ACCESSION   XP_061012242
VERSION     XP_061012242.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156259.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..139
                     /product="histone H2AX-like"
                     /calculated_mol_wt=14735
     Region          1..131
                     /region_name="PTZ00017"
                     /note="histone H2A; Provisional"
                     /db_xref="CDD:185399"
     CDS             1..139
                     /gene="LOC133065526"
                     /coded_by="XM_061156259.1:62..481"
                     /db_xref="GeneID:133065526"
ORIGIN      
        1 msgrgktggk arakaksrss rtglqfpvgr vhrllrkghy aervgagapv ylaavleylt
       61 aeilelagna ardnkktrii prhlqlairn deelnkllgg mtiaqggvlp niqavllpkk
      121 tsakapagsk katqasqey
//
LOCUS       XP_061012243             521 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat transmembrane neuronal protein 1 [Dama dama].
ACCESSION   XP_061012243
VERSION     XP_061012243.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156260.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..521
                     /product="leucine-rich repeat transmembrane neuronal
                     protein 1"
                     /calculated_mol_wt=58391
     Region          49..>315
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          91..114
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          115..138
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          139..162
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          163..186
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          187..210
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          211..234
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          235..257
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          258..281
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          282..302
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          306..318
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     CDS             1..521
                     /gene="LRRTM1"
                     /coded_by="XM_061156260.1:1..1566"
                     /db_xref="GeneID:133065527"
ORIGIN      
        1 mdflllglcl hwllrrpsgv vlcllgacfq mlpaapsgcp qlcrcegrll ycealnltea
       61 phnlsgllgl slrynglsel ragqftglmq ltwlyldhnh icsvqgdafq klrrvkeltl
      121 ssnqitqlan ttfrpmpnlr svdlsynklq alapdlfhgl rklttlhmra naiqfvpvri
      181 fqdcrslkfl digynqlksl arnsfaglfk ltelhlehnd lvkvnlahfp rlislhslcl
      241 rrnkvaivvs sldwvwnlek mdlsgneiey mephvfetvp hlqslqldsn rltyvepril
      301 sswksltsit lagnlwdcgr nvcalaswln nfqgrydgnl qcaspeyaqg edvldavyaf
      361 hlcdegaept sghllsavtn rsdlgspagp attladdreg qpdstpepvt valpgehaen
      421 avqihkvvtg tmalifsfli vvlvlyvswk cfpaslrqlr qcfvtqrrkq kqkqtmhqma
      481 amsaqeyyvd ykpnhiegal viineygsct chqqparece v
//
LOCUS       XP_061012244             953 aa            linear   MAM 02-DEC-2023
DEFINITION  catenin alpha-2 [Dama dama].
ACCESSION   XP_061012244
VERSION     XP_061012244.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156261.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..953
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..953
                     /product="catenin alpha-2"
                     /calculated_mol_wt=105182
     Region          18..914
                     /region_name="Vinculin"
                     /note="Vinculin family; pfam01044"
                     /db_xref="CDD:460040"
     CDS             1..953
                     /gene="CTNNA2"
                     /coded_by="XM_061156261.1:151..3012"
                     /db_xref="GeneID:133065529"
ORIGIN      
        1 mtsatspiil kwdpksleir tltverllep lvtqvttlvn tsnkgpsgkk kgrskkahvl
       61 aasveqatqn flekgeqiak esqdlkeelv aavedvrkqg etmriassef addpcssvkr
      121 gtmvraaral lsavtrllil admadvmrll shlkiveeal eavknatneq dlanrfkefg
      181 kemvklnyva arrqqelkdp hcrdemaaar galkknatml ytasqaflrh pdvaatranr
      241 dyvfkqvqea iagisnaaqa tsptdeakgh tgigelaaal nefdnkiild pmtfsearfr
      301 psleerlesi isgaalmads sctrddrrer ivaecnavrq alqdllseym nntgrkekgd
      361 plniaidkmt kktrdlrrql rkavmdhisd sfletnvpll vlieaaksgn ekevkeyaqv
      421 frehanklve vanlacsisn neegvklvrm aatqidslcp qvinaaltla arpqskvaqd
      481 nmdvfkdqwe kqvrvlteav dditsvddfl svsenhiled vnkcvialqe gdvdtldrta
      541 gairgraarv ihiinaemen yeagvytekv leatkllset vmprfaeqve vaiealsanv
      601 pqpfeenefi dasrlvydgv rdirkavlmi rtpeeledds dfeqedydvr srtsvqtedd
      661 qliagqsara imaqlpqeek akiaeqveif hqekskldae vakwddsgnd iivlakqmcm
      721 immemtdftr gkgplkntsd vinaakkiae agsrmdklar avadqcpdsa ckqdllaylq
      781 rialychqln icskvkaevq nlggelivsg tgvqstfttf yevdcdvidg grasqlsthl
      841 ptcaegapig sgssdssmld satsliqaak nlmnavvltv kasyvastky qkvygtaavn
      901 spvvswkmka pekkplvkre kpeefqtrvr rgsqkkhisp vqalsefkam dsf
//
LOCUS       XP_061012245             164 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/arginine-rich splicing factor 3-like [Dama dama].
ACCESSION   XP_061012245
VERSION     XP_061012245.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156262.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..164
                     /product="serine/arginine-rich splicing factor 3-like"
                     /calculated_mol_wt=19020
     Region          6..86
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..164
                     /gene="LOC133065530"
                     /coded_by="XM_061156262.1:90..584"
                     /db_xref="GeneID:133065530"
ORIGIN      
        1 mhrdscpldc kvyvgnlgnn gnkteleraf gysgplrsvw varnppgfaf vefedprdaa
       61 davpeldgrt lcgcrvrvel pngekrsrnr gpppswgrrp rddyrrrspp prrrsprrrs
      121 fsrsrsrsls rdrrrersls rernhkpsrs fsrscsrsrs nerk
//
LOCUS       XP_061012246             138 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM136A-like [Dama dama].
ACCESSION   XP_061012246
VERSION     XP_061012246.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156263.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..138
                     /product="protein FAM136A-like"
                     /calculated_mol_wt=15502
     Region          5..127
                     /region_name="DUF842"
                     /note="Eukaryotic protein of unknown function (DUF842);
                     pfam05811"
                     /db_xref="CDD:461747"
     CDS             1..138
                     /gene="LOC133065531"
                     /coded_by="XM_061156263.1:1..417"
                     /db_xref="GeneID:133065531"
ORIGIN      
        1 maelqqlrvq eavdsrvksl areniwkmqg ltfrcsaacc egsqgsmqqv hqcierchap
       61 laqaqalvts elekfqdhla wrtmycndka kdsidagske lhvkrqletc ltkcvddqin
      121 liptmtrkmk eslssmgk
//
LOCUS       XP_061012248             420 aa            linear   MAM 02-DEC-2023
DEFINITION  SH2 domain-containing protein 6 isoform X1 [Dama dama].
ACCESSION   XP_061012248
VERSION     XP_061012248.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156265.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..420
                     /product="SH2 domain-containing protein 6 isoform X1"
                     /calculated_mol_wt=45896
     Region          285..406
                     /region_name="SH2"
                     /note="Src homology 2 (SH2) domain; cl15255"
                     /db_xref="CDD:472789"
     Site            order(304,323,346,348)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198173"
     Site            order(347,380)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198173"
     CDS             1..420
                     /gene="SH2D6"
                     /coded_by="XM_061156265.1:10..1272"
                     /db_xref="GeneID:133065533"
ORIGIN      
        1 mwlscsaarg ifpdqglnhc llhwqeklsr rkarsgpplp pprcansqaw rkdepcpspl
       61 svprtwrhrh pfleapeeee eeedkyelpp ceallrhlap aqlsgieeds lyldhsaplg
      121 pptsplpppq pqpemvhslp arptpayhfp pkaalsplea lkqswpfgrr elgeparavp
      181 gpakepdedi yvecerspap aftqtlsspv ltapvplpri svgsrptitp qeaqngaska
      241 tsegsvpnqe apspylnitp hlevtrgpae rrtslssvaa aqntsaaqeg nllgqpwysg
      301 ncdrhaaesa llrcqkdgay tvrpssgprg tqpftlavll hgrvfnipir rladgrhyal
      361 gregrnheel fssvaamvqh ytqhplplld rqsgsrqltc llfptkpgrh stceasplap
//
LOCUS       XP_061012249             400 aa            linear   MAM 02-DEC-2023
DEFINITION  SH2 domain-containing protein 6 isoform X2 [Dama dama].
ACCESSION   XP_061012249
VERSION     XP_061012249.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156266.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..400
                     /product="SH2 domain-containing protein 6 isoform X2"
                     /calculated_mol_wt=43552
     Region          265..386
                     /region_name="SH2"
                     /note="Src homology 2 (SH2) domain; cl15255"
                     /db_xref="CDD:472789"
     Site            order(284,303,326,328)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198173"
     Site            order(327,360)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198173"
     CDS             1..400
                     /gene="SH2D6"
                     /coded_by="XM_061156266.1:259..1461"
                     /db_xref="GeneID:133065533"
ORIGIN      
        1 meklsrrkar sgpplppprc aiscsdsqaw rkdepcpspl svprtwrhrh pfleapeeee
       61 eeedkyelpp ceallrhlap aqlsgieeds lyldhsaplg pptsplpppq pqpemvhslp
      121 arptpayhfp pkaalsplea lkqswpfgrr elgeparavp gpakepdedi yvecerspap
      181 aftqtlsspv ltapvplpri svgsrptitp qeaqngaska tsegsvpnqe apspylnitp
      241 hlevtrgpae rrtslssvaa aqntsaaqeg nllgqpwysg ncdrhaaesa llrcqkdgay
      301 tvrpssgprg tqpftlavll hgrvfnipir rladgrhyal gregrnheel fssvaamvqh
      361 ytqhplplld rqsgsrqltc llfptkpgrh stceasplap
//
LOCUS       XP_061012250             396 aa            linear   MAM 02-DEC-2023
DEFINITION  SH2 domain-containing protein 6 isoform X3 [Dama dama].
ACCESSION   XP_061012250
VERSION     XP_061012250.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156267.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..396
                     /product="SH2 domain-containing protein 6 isoform X3"
                     /calculated_mol_wt=43161
     Region          261..382
                     /region_name="SH2"
                     /note="Src homology 2 (SH2) domain; cl15255"
                     /db_xref="CDD:472789"
     Site            order(280,299,322,324)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198173"
     Site            order(323,356)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198173"
     CDS             1..396
                     /gene="SH2D6"
                     /coded_by="XM_061156267.1:259..1449"
                     /db_xref="GeneID:133065533"
ORIGIN      
        1 meklsrrkar sgpplppprc ansqawrkde pcpsplsvpr twrhrhpfle apeeeeeeed
       61 kyelppceal lrhlapaqls gieedslyld hsaplgppts plpppqpqpe mvhslparpt
      121 payhfppkaa lsplealkqs wpfgrrelge paravpgpak epdediyvec erspapaftq
      181 tlsspvltap vplprisvgs rptitpqeaq ngaskatseg svpnqeapsp ylnitphlev
      241 trgpaerrts lssvaaaqnt saaqegnllg qpwysgncdr haaesallrc qkdgaytvrp
      301 ssgprgtqpf tlavllhgrv fnipirrlad grhyalgreg rnheelfssv aamvqhytqh
      361 plplldrqsg srqltcllfp tkpgrhstce asplap
//
LOCUS       XP_061012251             373 aa            linear   MAM 02-DEC-2023
DEFINITION  pulmonary surfactant-associated protein B [Dama dama].
ACCESSION   XP_061012251
VERSION     XP_061012251.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156268.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..373
                     /product="pulmonary surfactant-associated protein B"
                     /calculated_mol_wt=41173
     Region          29..60
                     /region_name="SapA"
                     /note="Saposin A-type domain; cl02494"
                     /db_xref="CDD:470592"
     Region          66..142
                     /region_name="SapB"
                     /note="Saposin (B) Domains; smart00741"
                     /db_xref="CDD:214797"
     Region          193..264
                     /region_name="SapB"
                     /note="Saposin (B) Domains; smart00741"
                     /db_xref="CDD:214797"
     Region          289..358
                     /region_name="SapB"
                     /note="Saposin (B) Domains; smart00741"
                     /db_xref="CDD:214797"
     CDS             1..373
                     /gene="SFTPB"
                     /coded_by="XM_061156268.1:1..1122"
                     /db_xref="GeneID:133065534"
ORIGIN      
        1 makshllpwl lllatlcgpg taagttysla caqgpefwcq sleqalqcra lghclqevwg
       61 hveaddlcqe cedisriltk makeaifqdt vrkfleqecd vlplkllvpq crhlldtyfp
      121 livdyfqsrm npkficqhvg lckprhpepg qgpepwgrlq dmlvlpllpe apqakpgpqt
      181 qdlsqqrfpi plpicwlcrt likriqavip kgvlamtvaq vchvvpllvg gicqclvery
      241 avilldtllg rmlpqlvcga vlrcssedsa gpalpalgsl pgewlpqdse cqlcvfvttq
      301 agnsseqamp qamrqaclgt wldkqkcerf veehaprlqt lvssgwdahr acqalgtcat
      361 pfsplqcfys phf
//
LOCUS       XP_061012252             145 aa            linear   MAM 02-DEC-2023
DEFINITION  granulysin [Dama dama].
ACCESSION   XP_061012252
VERSION     XP_061012252.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156269.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..145
                     /product="granulysin"
                     /calculated_mol_wt=15703
     Region          64..138
                     /region_name="SapB"
                     /note="Saposin (B) Domains; smart00741"
                     /db_xref="CDD:214797"
     CDS             1..145
                     /gene="GNLY"
                     /coded_by="XM_061156269.1:99..536"
                     /db_xref="GeneID:133065535"
ORIGIN      
        1 mtswavllia svllvapgla fsgltpehhd qatahlcegd elcqglsped pqgdlvlqke
       61 elgllcdncr limqrledmv gdqpnentvs eaaskvcskm kvlrgvcksi mkrflrvisr
      121 dilagkkpqa icfdirlcks kagli
//
LOCUS       XP_061012253             302 aa            linear   MAM 02-DEC-2023
DEFINITION  TATA-box-binding protein-like [Dama dama].
ACCESSION   XP_061012253
VERSION     XP_061012253.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156270.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..302
                     /product="TATA-box-binding protein-like"
                     /calculated_mol_wt=33460
     Region          125..298
                     /region_name="TBP_eukaryotes"
                     /note="eukaryotic TATA box binding protein (TBP): Present
                     in archaea and eukaryotes, TBPs are transcription factors
                     that recognize promoters and initiate transcription. TBP
                     has been shown to be an essential component of three
                     different transcription initiation...; cd04516"
                     /db_xref="CDD:239952"
     Site            order(129..130,132,159..160,164,166,173,175,179,181,183,
                     185,215,220,222,251..252,257,268,270,272,276)
                     /site_type="other"
                     /note="DNA interaction surface [nucleotide binding]"
                     /db_xref="CDD:239952"
     Site            order(144,151..153,155,160,166,168)
                     /site_type="other"
                     /note="TFIIA interaction surface [polypeptide binding]"
                     /db_xref="CDD:239952"
     Site            order(159,256..257,262,293..294)
                     /site_type="other"
                     /note="NC2 interaction surface [polypeptide binding]"
                     /db_xref="CDD:239952"
     Site            order(232..233,245..249,252,257)
                     /site_type="other"
                     /note="TFIIB interaction surface [polypeptide binding]"
                     /db_xref="CDD:239952"
     CDS             1..302
                     /gene="LOC133065537"
                     /coded_by="XM_061156270.1:1..909"
                     /db_xref="GeneID:133065537"
ORIGIN      
        1 mdrndslspf drylaspqga mspgipvfsp mmhygtgltp qpvqstdgls tleeeqqqak
       61 vatgqlstms qqatqeasdq tpplfnshpl mtapllgttp lypspmtpit pmtppmpase
      121 itelvpqlhn ivcmvnlgck ldlkrialla rnaeynpkrf vavimrirep rttalffssg
      181 kmvctggkse eqsrlaarky ariiqklgfp akfldfkiqn mvgscdvkfp irlealllsh
      241 rqfasyepel fpglvyrmik privllifvs gkvvltgakv rreineafnn iysilkgfrk
      301 is
//
LOCUS       XP_061012254             490 aa            linear   MAM 02-DEC-2023
DEFINITION  histone-lysine N-methyltransferase SMYD1 isoform X1 [Dama dama].
ACCESSION   XP_061012254
VERSION     XP_061012254.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156271.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..490
                     /product="histone-lysine N-methyltransferase SMYD1 isoform
                     X1"
                     /calculated_mol_wt=56259
     Region          7..281
                     /region_name="SET_SMYD1"
                     /note="SET domain (including post-SET domain) found in SET
                     and MYND domain-containing protein 1 (SMYD1) and similar
                     proteins; cd10526"
                     /db_xref="CDD:380924"
     Site            order(17..19,135,179..183,202..206,250,252,270,272)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380924"
     Site            order(17,19,133,135,180,202..206,252,270,272)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380924"
     Region          52..90
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     Site            order(103,177,179..183,192,202,251..252,254,270)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:380924"
     Site            order(208,274,276,279)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380924"
     Site            order(208,274,276,279)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380924"
     CDS             1..490
                     /gene="SMYD1"
                     /coded_by="XM_061156271.1:9..1481"
                     /db_xref="GeneID:133065539"
ORIGIN      
        1 mtigemenve vftvegkgrg lkatkefcaa diifaerays avvfdslvnv vchtcfkrqe
       61 klhrcgqckf ahycdrtcqk dawlnhknec saikrygkvp nenirlaari mwrveregsg
      121 ltegclvsvd dlqnhvehfg eeeqkelrld vdtflqywpp qsqqfsmqyi shifgvincn
      181 gftlsdqrgl qavgvgvfpn lalvnhdcwp nctvifnngn heavksmfht qmrielralg
      241 kisegeeltv syidflnise erkkqlkrqy yfdctcehck kglkddlflg vkddpkpsqe
      301 vvkemiqfsk dtlekidkar seglyhevvk lcreclqkqe pvfadtniyt lrllsivsev
      361 lsylqafeea shyarrmvdg ymklyhpnna qlgmaimrag ltnwhagnie vghgmickay
      421 aillvthgps hpitkdleam rmqtemelrm frqnefmyhk mreaalnnqp mqvmaepsne
      481 papalfhkkq
//
LOCUS       XP_061012255             477 aa            linear   MAM 02-DEC-2023
DEFINITION  histone-lysine N-methyltransferase SMYD1 isoform X2 [Dama dama].
ACCESSION   XP_061012255
VERSION     XP_061012255.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156272.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..477
                     /product="histone-lysine N-methyltransferase SMYD1 isoform
                     X2"
                     /calculated_mol_wt=54689
     Region          7..268
                     /region_name="SET_SMYD1"
                     /note="SET domain (including post-SET domain) found in SET
                     and MYND domain-containing protein 1 (SMYD1) and similar
                     proteins; cd10526"
                     /db_xref="CDD:380924"
     Site            order(17..19,135,179..183,202..206,237,239,257,259)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380924"
     Site            order(17,19,133,135,180,202..206,239,257,259)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380924"
     Region          52..90
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     Site            order(103,177,179..183,192,202,238..239,241,257)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:380924"
     Site            order(208,261,263,266)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380924"
     Site            order(208,261,263,266)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380924"
     CDS             1..477
                     /gene="SMYD1"
                     /coded_by="XM_061156272.1:9..1442"
                     /db_xref="GeneID:133065539"
ORIGIN      
        1 mtigemenve vftvegkgrg lkatkefcaa diifaerays avvfdslvnv vchtcfkrqe
       61 klhrcgqckf ahycdrtcqk dawlnhknec saikrygkvp nenirlaari mwrveregsg
      121 ltegclvsvd dlqnhvehfg eeeqkelrld vdtflqywpp qsqqfsmqyi shifgvincn
      181 gftlsdqrgl qavgvgvfpn lalvnhdcwp nctvifnngk ielralgkis egeeltvsyi
      241 dflniseerk kqlkrqyyfd ctcehckkgl kddlflgvkd dpkpsqevvk emiqfskdtl
      301 ekidkarseg lyhevvklcr eclqkqepvf adtniytlrl lsivsevlsy lqafeeashy
      361 arrmvdgymk lyhpnnaqlg maimragltn whagnievgh gmickayail lvthgpshpi
      421 tkdleamrmq temelrmfrq nefmyhkmre aalnnqpmqv maepsnepap alfhkkq
//
LOCUS       XP_061012256             127 aa            linear   MAM 02-DEC-2023
DEFINITION  fatty acid-binding protein, liver [Dama dama].
ACCESSION   XP_061012256
VERSION     XP_061012256.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156273.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..127
                     /product="fatty acid-binding protein, liver"
                     /calculated_mol_wt=14083
     Region          2..127
                     /region_name="FABP1"
                     /note="fatty acid-binding protein 1; cd19444"
                     /db_xref="CDD:381219"
     Site            order(3,15,18..19,22,28..29,31..32,35,37,39,41,48,50,52,
                     54..57,59,61,63,71..74,91,93,100,102,109,111,113,122,124)
                     /site_type="other"
                     /note="ligand binding cavity [chemical binding]"
                     /db_xref="CDD:381219"
     CDS             1..127
                     /gene="FABP1"
                     /coded_by="XM_061156273.1:134..517"
                     /db_xref="GeneID:133065540"
ORIGIN      
        1 mnfsgkyqvq tqenyeafmk avgmpddiiq kgkdikgvse ivqngkhfkf titagskviq
       61 neftlgeece mefmtgekik avvqlegdnk lvttfkgiks vtefngdtvt stmtkgdivf
      121 krvskri
//
LOCUS       XP_061012258             273 aa            linear   MAM 02-DEC-2023
DEFINITION  dnaJ homolog subfamily A member 1-like [Dama dama].
ACCESSION   XP_061012258
VERSION     XP_061012258.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156275.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..273
                     /product="dnaJ homolog subfamily A member 1-like"
                     /calculated_mol_wt=30416
     Region          2..>273
                     /region_name="PTZ00037"
                     /note="DnaJ_C chaperone protein; Provisional"
                     /db_xref="CDD:240236"
     CDS             1..273
                     /gene="LOC133065542"
                     /coded_by="XM_061156275.1:16..837"
                     /db_xref="GeneID:133065542"
ORIGIN      
        1 mvkettyydi lgvkpnatqe elkkayrkla lkyhpdknpn egekfkqisq ayevlsdakk
       61 relydkggeq aikeggaggg fgspmdifdm ffagggrmqr errgknvvhq ltvtledlyn
      121 gatrklalqk nvicdkcegr ggkkgavecc pncrgtgmqi rihqigpgmv qqiqsvcmec
      181 qghgerispk drckscngrk ivrekkilev hfdkgmkdgq kitfhgegdq epglepgdii
      241 ivldqkdhav ftrrgedlfm cmdiqlvevl cgf
//
LOCUS       XP_061012259             419 aa            linear   MAM 02-DEC-2023
DEFINITION  forkhead box protein I3 [Dama dama].
ACCESSION   XP_061012259
VERSION     XP_061012259.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156276.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..419
                     /product="forkhead box protein I3"
                     /calculated_mol_wt=42966
     Region          139..238
                     /region_name="FH_FOXI1"
                     /note="Forkhead (FH) domain found in Forkhead box protein
                     I1 (FOXI1) and similar proteins; cd20053"
                     /db_xref="CDD:410827"
     Site            order(147,165..166,169,188..189,191..192,195,202,212..214,
                     216)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410827"
     CDS             1..419
                     /gene="FOXI3"
                     /coded_by="XM_061156276.1:1..1260"
                     /db_xref="GeneID:133065543"
ORIGIN      
        1 malycgdnfg vysqpglpst aaaaaaapga paparapygl tdyaappaaa anpylwlngp
       61 avggppaaaa ylgapppppp ppggapgpfl qpptaagtfa caqrpfaqpa paapaspagp
      121 aapgelgwls masredlmkm vrppysysal iamaiqsape rkltlshiyq fvadsfpfyq
      181 rskagwqnsi rhnlslndcf kkvprdeddp gkgnywtldp ncekmfdngn frrkrkrrse
      241 anstpsvava tskseeglsp glgsgvggkp dgdsapaslr psqspepped tkstasspgv
      301 smlsstpcln sffsslstls vggsgstqra lpggrplgiq gpqvpsggvf ppssvpepss
      361 dplqlshtss ssssssqrss yygpfpasts gapsssfgsp fynfsmvnsl iypregsev
//
LOCUS       XP_061012260             180 aa            linear   MAM 02-DEC-2023
DEFINITION  protein SPMIP9 [Dama dama].
ACCESSION   XP_061012260
VERSION     XP_061012260.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156277.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..180
                     /product="protein SPMIP9"
                     /calculated_mol_wt=20277
     Region          11..180
                     /region_name="TSC21"
                     /note="TSC21 family; pfam15217"
                     /db_xref="CDD:464568"
     CDS             1..180
                     /gene="SPMIP9"
                     /coded_by="XM_061156277.1:1..543"
                     /db_xref="GeneID:133065544"
ORIGIN      
        1 msgmvfpgqa pvdldiyqss ymidykpygk hkyarvtseq qakldtqlrd kefyrptpsp
       61 npkledgypa fkrphmtakd lgqpgffppq dhvapvedec rftsicpsvy pashalylah
      121 gdpnrirqsa dfpclleper qpapdvgkgy fllpgcacpy hctvkvpiln rwgplmpfyq
//
LOCUS       XP_061012262             167 aa            linear   MAM 02-DEC-2023
DEFINITION  UBA-like domain-containing protein 2 [Dama dama].
ACCESSION   XP_061012262
VERSION     XP_061012262.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156279.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..167
                     /product="UBA-like domain-containing protein 2"
                     /calculated_mol_wt=18081
     Region          10..48
                     /region_name="UBA_F100B_like"
                     /note="UBA-like domain found in protein FAM100B; cd14343"
                     /db_xref="CDD:270528"
     CDS             1..167
                     /gene="LOC133065553"
                     /coded_by="XM_061156279.1:86..589"
                     /db_xref="GeneID:133065553"
ORIGIN      
        1 msvnmdelrh qvminqfvla agcaadqakq llqaahwqfe talstffqet nipnghhhhq
       61 mqmctpsntp atppnfpdal amfsklrase glqssnspmt avacsppanf spfwasspps
      121 hqaawippss ptahsfhhlh hpqptwppga qqgstqqkam aamdgqr
//
LOCUS       XP_061012263             152 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-1 family member 10 [Dama dama].
ACCESSION   XP_061012263
VERSION     XP_061012263.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156280.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..152
                     /product="interleukin-1 family member 10"
                     /calculated_mol_wt=17012
     Region          3..151
                     /region_name="beta-trefoil_IL1"
                     /note="beta-trefoil domain found in the interleukin-1
                     (IL-1) family of cytokines; cl00094"
                     /db_xref="CDD:469612"
     CDS             1..152
                     /gene="IL1F10"
                     /coded_by="XM_061156280.1:51..509"
                     /db_xref="GeneID:133065554"
ORIGIN      
        1 mcslpmakyy iikdaeqkal ymrdgqflmg dpdadnchae ticilpnrgl ertkfpiflg
       61 vqggsrclac vetgegpslq ledvniedly kggeeairft ffqrssgpaf rleaaawpgw
      121 flssssephq pmrlskesep sartefyfeq sr
//
LOCUS       XP_061012264             155 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-36 receptor antagonist protein [Dama dama].
ACCESSION   XP_061012264
VERSION     XP_061012264.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156281.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..155
                     /product="interleukin-36 receptor antagonist protein"
                     /calculated_mol_wt=17007
     Region          5..154
                     /region_name="beta-trefoil_IL36RA"
                     /note="beta-trefoil domain found in interleukin-36
                     receptor antagonist protein (IL-36RA) and similar
                     proteins; cd23303"
                     /db_xref="CDD:466785"
     CDS             1..155
                     /gene="IL36RN"
                     /coded_by="XM_061156281.1:12..479"
                     /db_xref="GeneID:133065555"
ORIGIN      
        1 mvlsgalcfr mkdaalkvly lhdnqllagg lqagkvikge eisvvpnrsl daklspvilg
       61 vqggsqclsc gtgqeptlkl epvnimelyh saekskkftf yrrdtgltss fesaaypgwf
      121 lctvpeadqp lqitrllkdt swdepitdfy fqqcd
//
LOCUS       XP_061012265             159 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-36 gamma [Dama dama].
ACCESSION   XP_061012265
VERSION     XP_061012265.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156282.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..159
                     /product="interleukin-36 gamma"
                     /calculated_mol_wt=18005
     Region          4..149
                     /region_name="beta-trefoil_IL36"
                     /note="beta-trefoil domain found in the family of
                     interleukin-36 (IL-36) and similar proteins; cd23300"
                     /db_xref="CDD:466782"
     Site            order(5,40,42,55,57,103,105,110,145..147,149)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:466782"
     CDS             1..159
                     /gene="IL36G"
                     /coded_by="XM_061156282.1:69..548"
                     /db_xref="GeneID:133065556"
ORIGIN      
        1 mdcprpalvs dwnqqvwilq gqtlmavpws nnvrpvtvti mpckypesle kdkgvpiylg
       61 ikqpemclyc eaiggqpklq lenqnimdly nqakpvkpfl fyrettgkts tfesvafpgw
      121 fiassetnqp ifliselgnv yntafqldfk elsqlnysl
//
LOCUS       XP_061012267             454 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: splicing factor 3B subunit 4-like [Dama dama].
ACCESSION   XP_061012267
VERSION     XP_061012267.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156284.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..454
                     /product="LOW QUALITY PROTEIN: splicing factor 3B subunit
                     4-like"
                     /calculated_mol_wt=47460
     Region          15..88
                     /region_name="RRM1_SF3B4"
                     /note="RNA recognition motif 1 (RRM1) found in splicing
                     factor 3B subunit 4 (SF3B4) and similar proteins; cd12334"
                     /db_xref="CDD:409771"
     Region          99..181
                     /region_name="RRM2_SF3B4"
                     /note="RNA recognition motif 2 (RRM2) found in splicing
                     factor 3B subunit 4 (SF3B4) and similar proteins; cd12335"
                     /db_xref="CDD:409772"
     CDS             1..454
                     /gene="LOC133065561"
                     /coded_by="XM_061156284.1:12..1376"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /db_xref="GeneID:133065561"
ORIGIN      
        1 maarpisern qdasvyvggl dekvsepllw elflqagpvv nthmpkdrvt gqhqgygfve
       61 flseedadya ikimnmikly gkpirvnkas ahnknldvga niftgnldpe idekllydtf
      121 safgvilqtp kimwdpdtgn skgyafinfa sfdasdaate amkgqylcnr pitvsyafkk
      181 dskgxrhgsa aerllaaqnp lsqadrphql fadappppsa pnpvvsslgs glpppgmppp
      241 gsfpppvppp galppgippa mppppmppga gghgppsagt pgaghpghgh shphpfppgg
      301 mphpgmsqmq lahhgphglg hphagppgtg gqppprpppg mphpgpppmg mpprgppfgs
      361 pmghpgpvpp hgmrgppplm pphgytgppr pppygyqrgl lppprptlrp pvpprgplrg
      421 plpqcflivf ppvgslpisi hflgpirvai arrg
//
LOCUS       XP_061012268             304 aa            linear   MAM 02-DEC-2023
DEFINITION  sulfotransferase 1C3 [Dama dama].
ACCESSION   XP_061012268
VERSION     XP_061012268.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156285.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..304
                     /product="sulfotransferase 1C3"
                     /calculated_mol_wt=35727
     Region          46..297
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; pfam00685"
                     /db_xref="CDD:425820"
     CDS             1..304
                     /gene="SULT1C3"
                     /coded_by="XM_061156285.1:1..915"
                     /db_xref="GeneID:133065562"
ORIGIN      
        1 msleemkdlh ledkylqpet kevngilmtk misdnwdkiw nfqakpddll iatyakagtt
       61 wtqeivdmiq ndgdlqkcqr antfdrhpfi ewalppplss gldlankmps prtlkthlpv
      121 qmlppsfwke ntkiiyvarn akdclvsyyh fsrmnkmvpd pgsweeyiet fkggkvlwgs
      181 wydhvkgwwh akdqhrilyl fyedmkedpk reiqkilkfl ekevseevld kiihhtsfev
      241 mkenpmanyt tlptsimdhs ispfmrrgmp gdwknyftva qnedfdkdye rkmagstltf
      301 rtal
//
LOCUS       XP_061012269             295 aa            linear   MAM 02-DEC-2023
DEFINITION  sulfotransferase 1C2 [Dama dama].
ACCESSION   XP_061012269
VERSION     XP_061012269.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156286.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..295
                     /product="sulfotransferase 1C2"
                     /calculated_mol_wt=33956
     Region          38..287
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; pfam00685"
                     /db_xref="CDD:425820"
     CDS             1..295
                     /gene="SULT1C2"
                     /coded_by="XM_061156286.1:1..888"
                     /db_xref="GeneID:133065563"
ORIGIN      
        1 malitagtqp slgevagipl pattvdnwpq iqgfeaqpdd llictypksg ttwiqeivdl
       61 ieqsgdvdkc qraaiqhrhp flewarppqp sgvekaramp rprvlrthlp aqllppsfwk
      121 snckflyvar nakdclvsyy hfqrmnrtlp dpgtwdqyfe tfisgkvawg swfkhvrgww
      181 elrdsvrmlf lfyedikrnp kqeiqkvmkf mgknldgavl dtivqettfe kmkanpmtnr
      241 stapktvldq sispfmrkgi vgdwknhftv aqnerfdeiy rqkmkgtsin fctel
//
LOCUS       XP_061012270             449 aa            linear   MAM 02-DEC-2023
DEFINITION  tumor necrosis factor receptor superfamily member EDAR isoform X1
            [Dama dama].
ACCESSION   XP_061012270
VERSION     XP_061012270.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156287.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..449
                     /product="tumor necrosis factor receptor superfamily
                     member EDAR isoform X1"
                     /calculated_mol_wt=48217
     Region          13..148
                     /region_name="TNFRSF_EDAR"
                     /note="Tumor necrosis factor receptor superfamily member
                     ectodysplasin A receptor (EDAR); cd13421"
                     /db_xref="CDD:276926"
     Region          31..71
                     /region_name="CRD1"
                     /note="CRD1 [structural motif]"
                     /db_xref="CDD:276926"
     Region          74..113
                     /region_name="CRD2"
                     /note="CRD2 [structural motif]"
                     /db_xref="CDD:276926"
     Region          116..148
                     /region_name="CRD3"
                     /note="CRD3 [structural motif]"
                     /db_xref="CDD:276926"
     Region          355..429
                     /region_name="DD"
                     /note="Death Domain Superfamily of protein-protein
                     interaction domains; cl14633"
                     /db_xref="CDD:472698"
     CDS             1..449
                     /gene="EDAR"
                     /coded_by="XM_061156287.1:201..1550"
                     /db_xref="GeneID:133065564"
ORIGIN      
        1 mahrgsrtgm awlpvllasl gcwvsaeeas cgenefynqt tglchecpqc apgeepylsc
       61 gygtrdedyg cvpcpaekfs kggyqicrrh kdcegffrat vltpgdterd aecgpclpgy
      121 ymlenrprni yglvcyscll appntkecvg aasgvsanfp rtpgsstlsp pqlahkaels
      181 gqghlatalv iamstiftma vaivliimfy ilkarpsapa ccpsapvksp eapvseeeek
      241 keaqdnvvif sekdefeklt aapaksakse ndassekeql lnrsldsdee papdgqgppe
      301 lcllslvhla rdksatatra agiqsrrkki ldvyasvcgv veglsptelp fdclektsrm
      361 lsatynseka vvktwrhlae sfglkrdeig gmtdglqlfd ristagysip elltklvqie
      421 rldaveslca dilewagvpp paappppas
//
LOCUS       XP_061012271             448 aa            linear   MAM 02-DEC-2023
DEFINITION  tumor necrosis factor receptor superfamily member EDAR isoform X2
            [Dama dama].
ACCESSION   XP_061012271
VERSION     XP_061012271.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156288.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..448
                     /product="tumor necrosis factor receptor superfamily
                     member EDAR isoform X2"
                     /calculated_mol_wt=48146
     Region          13..148
                     /region_name="TNFRSF_EDAR"
                     /note="Tumor necrosis factor receptor superfamily member
                     ectodysplasin A receptor (EDAR); cd13421"
                     /db_xref="CDD:276926"
     Region          31..71
                     /region_name="CRD1"
                     /note="CRD1 [structural motif]"
                     /db_xref="CDD:276926"
     Region          74..113
                     /region_name="CRD2"
                     /note="CRD2 [structural motif]"
                     /db_xref="CDD:276926"
     Region          116..148
                     /region_name="CRD3"
                     /note="CRD3 [structural motif]"
                     /db_xref="CDD:276926"
     Region          354..428
                     /region_name="DD"
                     /note="Death Domain Superfamily of protein-protein
                     interaction domains; cl14633"
                     /db_xref="CDD:472698"
     CDS             1..448
                     /gene="EDAR"
                     /coded_by="XM_061156288.1:201..1547"
                     /db_xref="GeneID:133065564"
ORIGIN      
        1 mahrgsrtgm awlpvllasl gcwvsaeeas cgenefynqt tglchecpqc apgeepylsc
       61 gygtrdedyg cvpcpaekfs kggyqicrrh kdcegffrat vltpgdterd aecgpclpgy
      121 ymlenrprni yglvcyscll appntkecvg aasgvsanfp rtpgsstlsp pqlahkelsg
      181 qghlatalvi amstiftmav aivliimfyi lkarpsapac cpsapvkspe apvseeeekk
      241 eaqdnvvifs ekdefeklta apaksaksen dassekeqll nrsldsdeep apdgqgppel
      301 cllslvhlar dksatatraa giqsrrkkil dvyasvcgvv eglsptelpf dclektsrml
      361 satynsekav vktwrhlaes fglkrdeigg mtdglqlfdr istagysipe lltklvqier
      421 ldaveslcad ilewagvppp aappppas
//
LOCUS       XP_061012273             458 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 85A isoform X1 [Dama dama].
ACCESSION   XP_061012273
VERSION     XP_061012273.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156290.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..458
                     /product="coiled-coil domain-containing protein 85A
                     isoform X1"
                     /calculated_mol_wt=49787
     Region          28..218
                     /region_name="CCDC85"
                     /note="CCDC85 family; pfam10226"
                     /db_xref="CDD:463009"
     CDS             1..458
                     /gene="CCDC85A"
                     /coded_by="XM_061156290.1:698..2074"
                     /db_xref="GeneID:133065570"
ORIGIN      
        1 mskaaggasa aescpptsag psaaaavedl skvsdeellq wskeelircl rraeaekvsa
       61 mldhsnlire vnrrlqlhlg eirglkdinq klqednqelr dlccfldddr qkgkrvsrew
      121 qrlgrytagv mhkevalylq klkelevkqe evvkenmelk elcvlldeek gtgcagsrcs
      181 idsqaslcql saaaapyvrd vgdgsstsst gstdspdhkh hagggspehl qkarpegspe
      241 hakhgsaspe hlqkarasgt pdhpkalkgp spehhkplck gspeqqrhph agnspetlpk
      301 hvlsgspehf qkhrpggspe hprhsggspe hlqkhalggs lehlprvrgt spehlkqhfg
      361 gspdhkhvgg gggsgsssre gtlrrqaqed vsahhrnvys gmnestlsyv rqlearvrql
      421 eeenrmlpqv vwrklgdaag scpgirqhls gnqykgpm
//
LOCUS       XP_061012274             419 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 85A isoform X2 [Dama dama].
ACCESSION   XP_061012274
VERSION     XP_061012274.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156291.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..419
                     /product="coiled-coil domain-containing protein 85A
                     isoform X2"
                     /calculated_mol_wt=45510
     Region          28..218
                     /region_name="CCDC85"
                     /note="CCDC85 family; pfam10226"
                     /db_xref="CDD:463009"
     CDS             1..419
                     /gene="CCDC85A"
                     /coded_by="XM_061156291.1:698..1957"
                     /db_xref="GeneID:133065570"
ORIGIN      
        1 mskaaggasa aescpptsag psaaaavedl skvsdeellq wskeelircl rraeaekvsa
       61 mldhsnlire vnrrlqlhlg eirglkdinq klqednqelr dlccfldddr qkgkrvsrew
      121 qrlgrytagv mhkevalylq klkelevkqe evvkenmelk elcvlldeek gtgcagsrcs
      181 idsqaslcql saaaapyvrd vgdgsstsst gstdspdhkh hagggspehl qkarpegspe
      241 hakhgsaspe hlqkarasgt pdhpkalkgp spehhkplck gspeqqrhph agnspetlpk
      301 hvlsgspehf qkhrpggspe hprhsggspe hlqkhalggs lehlprvrgt spehlkqhfg
      361 gspdhkhvgg gggsgsssre gtlrrqaqed vsahhrnvys gmngcmeetw rccrfvswn
//
LOCUS       XP_061012275             543 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 85A isoform X3 [Dama dama].
ACCESSION   XP_061012275
VERSION     XP_061012275.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156292.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..543
                     /product="coiled-coil domain-containing protein 85A
                     isoform X3"
                     /calculated_mol_wt=59009
     Region          28..218
                     /region_name="CCDC85"
                     /note="CCDC85 family; pfam10226"
                     /db_xref="CDD:463009"
     CDS             1..543
                     /gene="CCDC85A"
                     /coded_by="XM_061156292.1:698..2329"
                     /db_xref="GeneID:133065570"
ORIGIN      
        1 mskaaggasa aescpptsag psaaaavedl skvsdeellq wskeelircl rraeaekvsa
       61 mldhsnlire vnrrlqlhlg eirglkdinq klqednqelr dlccfldddr qkgkrvsrew
      121 qrlgrytagv mhkevalylq klkelevkqe evvkenmelk elcvlldeek gtgcagsrcs
      181 idsqaslcql saaaapyvrd vgdgsstsst gstdspdhkh hagggspehl qkarpegspe
      241 hakhgsaspe hlqkarasgt pdhpkalkgp spehhkplck gspeqqrhph agnspetlpk
      301 hvlsgspehf qkhrpggspe hprhsggspe hlqkhalggs lehlprvrgt spehlkqhfg
      361 gspdhkhvgg gggsgsssre gtlrrqaqed vsahhrnvys gmnestlsyv rqlearvrql
      421 eeenrmlpqa tqnrrqpptr nssnmekgwg prarrvlqww qgcrgigrcl ptlpgsfrls
      481 sgadgsnssp nspasfsght tpsqqpepvv hslkvvwrkl gdaagscpgi rqhlsgnqyk
      541 gpm
//
LOCUS       XP_061012276             550 aa            linear   MAM 02-DEC-2023
DEFINITION  clathrin heavy chain linker domain-containing protein 1 [Dama
            dama].
ACCESSION   XP_061012276
VERSION     XP_061012276.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156293.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..550
                     /product="clathrin heavy chain linker domain-containing
                     protein 1"
                     /calculated_mol_wt=62953
     Region          <23..105
                     /region_name="TSNAXIP1_N"
                     /note="Translin-associated factor X-interacting
                     N-terminus; pfam15739"
                     /db_xref="CDD:464835"
     Region          261..315
                     /region_name="Clathrin_H_link"
                     /note="Clathrin-H-link; pfam13838"
                     /db_xref="CDD:463995"
     CDS             1..550
                     /gene="CLHC1"
                     /coded_by="XM_061156293.1:6..1658"
                     /db_xref="GeneID:133065572"
ORIGIN      
        1 mqfrtsllps ycrlavglek gikvieyvta yksiltsikk eydtfietik kgqrtafylh
       61 gklrvlagep talvyhrkri aqlqakmgli ennsskiqlq inemkqvrak ydtkeeqlci
      121 cckeplkpip gmtlqesvsl daltkylkhl egkyaeieel mskkyvpiqr kadldeemtv
      181 vlerrdsten lnnelqfshq rlqvisqalt lwvksdrsrs fqdiveniqk skdlhdkqgi
      241 veelleedps kaketeilly fierfnelis lgeyekavyf avngprrilh nigtvnkfka
      301 igkirgkpsp lllffeavfs ishafrhpvd avltlegikc glsekrldlv inwvtqerlt
      361 fseeagdvif dygeqdtynk pkclalaqii ysecglhkka llclckqgqi hgameyiqqf
      421 kdftsddlkq liklcpniel iqcltkewng kppylsfgla vlhlfsvdmr kigikllqei
      481 skggkdaveh lmindpfcsl ekwqevanvc lqngfdqlsn dimsvlrsqa gvteiseedd
      541 tvnlmqhvfw
//
LOCUS       XP_061012277             290 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C2orf73 homolog [Dama dama].
ACCESSION   XP_061012277
VERSION     XP_061012277.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156294.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..290
                     /product="uncharacterized protein C2orf73 homolog"
                     /calculated_mol_wt=32697
     Region          38..284
                     /region_name="GDWWSH"
                     /note="Protein of unknown function with motif GDWWSH;
                     pfam15667"
                     /db_xref="CDD:464790"
     CDS             1..290
                     /gene="C11H2orf73"
                     /coded_by="XM_061156294.1:67..939"
                     /db_xref="GeneID:133065573"
ORIGIN      
        1 megkedkqqq hkiedagily vtekeefkhe kkpgksiqhs kpcvgrgrvy yakfintnvr
       61 tcnepvpyid vkkepenqgd wwshgkgled pfpppydtks tqrsdfrkpa cplvspvkys
      121 klqkpsygiv plvspdasee lqrnfreris fihqydarkt pnepirgkrh gvfvqteikp
      181 gsrptvpert evllntsgsc sseqskktek gnsaegkmis pglcrqnsqe lletkthlse
      241 tdirvaanas prsperrekm akvfqiavvn alltrhdpls ppiksqdklg
//
LOCUS       XP_061012278             695 aa            linear   MAM 02-DEC-2023
DEFINITION  follicle-stimulating hormone receptor isoform X1 [Dama dama].
ACCESSION   XP_061012278
VERSION     XP_061012278.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156295.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..695
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..695
                     /product="follicle-stimulating hormone receptor isoform
                     X1"
                     /calculated_mol_wt=78008
     Region          17..50
                     /region_name="LRRNT"
                     /note="Leucine rich repeat N-terminal domain; smart00013"
                     /db_xref="CDD:214470"
     Region          42..>269
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          51..71
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          72..96
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          97..121
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          122..143
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          144..169
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          170..194
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          195..219
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          220..243
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          282..349
                     /region_name="GnHR_trans"
                     /note="Gonadotropin hormone receptor transmembrane region;
                     pfam12369"
                     /db_xref="CDD:432511"
     Region          363..637
                     /region_name="7tmA_FSH-R"
                     /note="follicle-stimulating hormone receptor, member of
                     the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15360"
                     /db_xref="CDD:320482"
     Region          364..390
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320482"
     Region          397..422
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320482"
     Site            order(418,421..422,442..447,449..450,453,498,500..504,526,
                     529..531,533..535,537..538,585,588..589,591..592,595,
                     604..605,607..609,612,615..616)
                     /site_type="other"
                     /note="putative peptide ligand binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:320482"
     Region          442..472
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320482"
     Region          484..506
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320482"
     Region          526..555
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320482"
     Region          565..595
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320482"
     Region          605..630
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320482"
     CDS             1..695
                     /gene="FSHR"
                     /coded_by="XM_061156295.1:1..2088"
                     /db_xref="GeneID:133065578"
ORIGIN      
        1 malllvalla flslgsgchh rlchcsngvf lcqeskvtei psdlprdave lrfvltklrv
       61 ipkgafsgfg dlekieisqn dvlevieakv fsnlpklhei riekannlly idpdafqnlp
      121 nlryllisnt gikslpdvhk iqslqkvlld iqdninihtv ernsfmglsf esmivwlskn
      181 giqeihncaf ngtqldelnl sdnsnleelp ndvfqgasgp vildisrtri hslpsyglen
      241 lkklraksty rlkklpslek lvtlveaslt ypshccafen wrrqtsdlhp icnksilrqe
      301 vddmtqargq rvslaeddep syakgfdmmy sefdydlcne vvdvtcspep dafnpcedim
      361 gddilrvliw fisilaitgn ilvlvilits qykltvprfl mcnlafadlc igiylllias
      421 vdvhtksqyh nyaidwqtga gcdaagfftv faselsvytl taitlerwht ithamqleck
      481 vqlrhaasim lvgwifafav alfpifgiss ymkvsiclpm didsplsqly vmsllvlnvl
      541 afvvicgcyi hiyltvrnpn itssssdtki akrmamlift dflcmapisf faisaslkvp
      601 litvskskil lvlfypinsc anpflyaift knfrrdffil lskfgcyevq aqtyrsetss
      661 tahnfhprng hcppaprvtn gsnytliplr hlakn
//
LOCUS       XP_061012279             669 aa            linear   MAM 02-DEC-2023
DEFINITION  follicle-stimulating hormone receptor isoform X2 [Dama dama].
ACCESSION   XP_061012279
VERSION     XP_061012279.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156296.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..669
                     /product="follicle-stimulating hormone receptor isoform
                     X2"
                     /calculated_mol_wt=75016
     Region          17..50
                     /region_name="LRRNT"
                     /note="Leucine rich repeat N-terminal domain; smart00013"
                     /db_xref="CDD:214470"
     Region          42..>243
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          72..96
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          97..121
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          122..143
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          144..168
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          169..193
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          194..217
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          256..323
                     /region_name="GnHR_trans"
                     /note="Gonadotropin hormone receptor transmembrane region;
                     pfam12369"
                     /db_xref="CDD:432511"
     Region          337..611
                     /region_name="7tmA_FSH-R"
                     /note="follicle-stimulating hormone receptor, member of
                     the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15360"
                     /db_xref="CDD:320482"
     Region          338..364
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320482"
     Region          371..396
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320482"
     Site            order(392,395..396,416..421,423..424,427,472,474..478,500,
                     503..505,507..509,511..512,559,562..563,565..566,569,
                     578..579,581..583,586,589..590)
                     /site_type="other"
                     /note="putative peptide ligand binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:320482"
     Region          416..446
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320482"
     Region          458..480
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320482"
     Region          500..529
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320482"
     Region          539..569
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320482"
     Region          579..604
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320482"
     CDS             1..669
                     /gene="FSHR"
                     /coded_by="XM_061156296.1:1..2010"
                     /db_xref="GeneID:133065578"
ORIGIN      
        1 malllvalla flslgsgchh rlchcsngvf lcqeskvtei psdlprdave lrfvltklrv
       61 ipkgafsgfg dlekieisqn dvlevieakv fsnlpklhei riekannlly idpdafqnlp
      121 nlryllisnt gikslpdvhk iqslqkvllw lskngiqeih ncafngtqld elnlsdnsnl
      181 eelpndvfqg asgpvildis rtrihslpsy glenlkklra kstyrlkklp sleklvtlve
      241 asltypshcc afenwrrqts dlhpicnksi lrqevddmtq argqrvslae ddepsyakgf
      301 dmmysefdyd lcnevvdvtc spepdafnpc edimgddilr vliwfisila itgnilvlvi
      361 litsqykltv prflmcnlaf adlcigiyll liasvdvhtk sqyhnyaidw qtgagcdaag
      421 fftvfasels vytltaitle rwhtithamq leckvqlrha asimlvgwif afavalfpif
      481 gissymkvsi clpmdidspl sqlyvmsllv lnvlafvvic gcyihiyltv rnpnitssss
      541 dtkiakrmam liftdflcma pisffaisas lkvplitvsk skillvlfyp inscanpfly
      601 aiftknfrrd ffillskfgc yevqaqtyrs etsstahnfh prnghcppap rvtngsnytl
      661 iplrhlakn
//
LOCUS       XP_061012280             700 aa            linear   MAM 02-DEC-2023
DEFINITION  lutropin-choriogonadotropic hormone receptor [Dama dama].
ACCESSION   XP_061012280
VERSION     XP_061012280.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156297.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..700
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..700
                     /product="lutropin-choriogonadotropic hormone receptor"
                     /calculated_mol_wt=78078
     Region          52..75
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          63..201
                     /region_name="LRR_5"
                     /note="BspA type Leucine rich repeat region (6 copies);
                     pfam13306"
                     /db_xref="CDD:463839"
     Region          76..100
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          101..125
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          126..151
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          152..175
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          177..199
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          200..224
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          225..245
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          361..635
                     /region_name="7tmA_LHCGR"
                     /note="luteinizing hormone-choriogonadotropin receptor,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15359"
                     /db_xref="CDD:320481"
     Region          362..388
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320481"
     Region          395..420
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320481"
     Site            order(416,419..420,440..445,447..448,451,496,498..502,524,
                     527..529,531..533,535..536,583,586..587,589..590,593,
                     602..603,605..607,610,613..614)
                     /site_type="other"
                     /note="putative peptide ligand binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:320481"
     Region          440..470
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320481"
     Region          482..504
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320481"
     Region          524..553
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320481"
     Region          563..593
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320481"
     Region          603..628
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320481"
     CDS             1..700
                     /gene="LHCGR"
                     /coded_by="XM_061156297.1:1..2103"
                     /db_xref="GeneID:133065579"
ORIGIN      
        1 mgrpslplrl llalllpppa pllwalrpap cpepcscppd galrcpgpra glsrlsltyl
       61 pikvipsqaf rglnevikie isqsdsleki eanafdnlln lseiliqntk nlvyieagaf
      121 tnlpqlkyls icntgirklp dvtkifssef nfileicdnl hittvpgnaf qgmnnesitl
      181 klygngfeei qshafngttl islelkenah lekmhndafr gatgpsildi sstklqalps
      241 yglesiqtli atssyslkkl psrekftnll datltypshc cafrnlptke qnfsfsifkn
      301 fskqcestar rpnnetlysa vfaeielsgw dydygfclpk tlqcapepda fnpcedimgy
      361 dflrvliwli nilaivgnvt vlfvlltsry kltvprflmc nlsfadlcmg lyllliasvd
      421 aqtkgqyhnh aidwqtgsgc saagfftvfa selsvytltv itlerwhtit yaiqldqklr
      481 lkhaipvmlg gwlfssliam lplvgvsnym kvsiclpmdv ettlsqvyil tililnvlaf
      541 iiicacyiki yfavqnpelm atnrdtkiak kmavliftdf tcmapisffa isaafkvpli
      601 tvtnskvllv lfypvnscan pflyaiftka frrdffllls kfgcckyrae lyrrkdfsay
      661 isnckngftg snkpsrstlk lttlqcqysa vldktcckec
//
LOCUS       XP_061012281             226 aa            linear   MAM 02-DEC-2023
DEFINITION  V-type proton ATPase subunit E 2 [Dama dama].
ACCESSION   XP_061012281
VERSION     XP_061012281.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156298.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..226
                     /product="V-type proton ATPase subunit E 2"
                     /calculated_mol_wt=26088
     Region          18..216
                     /region_name="vATP-synt_E"
                     /note="ATP synthase (E/31 kDa) subunit; pfam01991"
                     /db_xref="CDD:396537"
     CDS             1..226
                     /gene="ATP6V1E2"
                     /coded_by="XM_061156298.1:103..783"
                     /db_xref="GeneID:133065581"
ORIGIN      
        1 malsdfdvqk qikhmmafie qeanekaeei dakaeeefni ekgrlvqtqr ltiieyyekk
       61 ekqieqqkki qmsalrnqar lkvlrarndl isellndakl rlsrmvtdqk fyqglldklv
      121 lqgllrllep vmivrckpqd hllveaavqr avpqyttvsh rcvevqvdre vqlatdtigg
      181 vevyssdqri mvsntlesrl dllaqqkmpe irkalfgand srkffv
//
LOCUS       XP_061012282             108 aa            linear   MAM 02-DEC-2023
DEFINITION  peptidyl-prolyl cis-trans isomerase FKBP1A-like [Dama dama].
ACCESSION   XP_061012282
VERSION     XP_061012282.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156299.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..108
                     /product="peptidyl-prolyl cis-trans isomerase FKBP1A-like"
                     /calculated_mol_wt=11888
     Region          3..107
                     /region_name="FkpA"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG0545"
                     /db_xref="CDD:440311"
     CDS             1..108
                     /gene="LOC133065583"
                     /coded_by="XM_061156299.1:19..345"
                     /db_xref="GeneID:133065583"
ORIGIN      
        1 mgvqvetisp gdgrtfpqrg qtcvvhytgt ledgkkfdss rdrnkpfkcv lgkkqvirgw
       61 degiaqmsvg qrakltvspd yrygarghpg iippndtlif dvellrve
//
LOCUS       XP_061012283             296 aa            linear   MAM 02-DEC-2023
DEFINITION  homeobox protein SIX2 [Dama dama].
ACCESSION   XP_061012283
VERSION     XP_061012283.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156300.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..296
                     /product="homeobox protein SIX2"
                     /calculated_mol_wt=32552
     Region          9..118
                     /region_name="SIX1_SD"
                     /note="Transcriptional regulator, SIX1, N-terminal SD
                     domain; pfam16878"
                     /db_xref="CDD:465293"
     Region          129..180
                     /region_name="homeodomain"
                     /note="Homeodomain; DNA binding domains involved in the
                     transcriptional regulation of key eukaryotic developmental
                     processes; may bind to DNA as monomers or as homo- and/or
                     heterodimers, in a sequence-specific manner; cd00086"
                     /db_xref="CDD:238039"
     Site            order(130,170,173..174,177)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     CDS             1..296
                     /gene="SIX2"
                     /coded_by="XM_061156300.1:1..891"
                     /db_xref="GeneID:133065585"
ORIGIN      
        1 msmlptfgft qeqvacvcev lqqggnierl grflwslpac ehlhknesvl kakavvafhr
       61 gnfrelykil eshqfsphnh aklqqlwlka hyieaeklrg rplgavgkyr vrrkfplprs
      121 iwdgeetsyc fkeksrsvlr ewyahnpyps prekrelaea tgltttqvsn wfknrrqrdr
      181 aaeakerens ensnanshnp laaslngsgk svlgssedek tpsgtpdhss sspalllspp
      241 pppglpslhs lghppgpsav pvpvpgggga dplqhhhglq dsilnpmsan lvdlgs
//
LOCUS       XP_061012285             325 aa            linear   MAM 02-DEC-2023
DEFINITION  homeobox protein SIX3 [Dama dama].
ACCESSION   XP_061012285
VERSION     XP_061012285.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156302.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..325
                     /product="homeobox protein SIX3"
                     /calculated_mol_wt=34929
     Region          80..193
                     /region_name="SIX1_SD"
                     /note="Transcriptional regulator, SIX1, N-terminal SD
                     domain; pfam16878"
                     /db_xref="CDD:465293"
     Region          201..249
                     /region_name="homeodomain"
                     /note="Homeodomain; DNA binding domains involved in the
                     transcriptional regulation of key eukaryotic developmental
                     processes; may bind to DNA as monomers or as homo- and/or
                     heterodimers, in a sequence-specific manner; cd00086"
                     /db_xref="CDD:238039"
     Site            order(202,205,245,248..249)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     CDS             1..325
                     /gene="SIX3"
                     /coded_by="XM_061156302.1:1..978"
                     /db_xref="GeneID:133065586"
ORIGIN      
        1 mvfrspldly sshfllpnfa dshhrsllla ssgggngsgg gggggsgvgg ggaggagggg
       61 ggsrappeel smfqlptlnf speqvasvce tleetgdier lgrflwslpv apgaceaink
      121 hesilrarav vafhtgnfrd lyhilenhkf tkeshgklqa mwleahyqea eklrgrplgp
      181 vdkyrvrkkf plprtiwdge qkthcfkert rsllrewylq dpypnpskkr elaqatgltp
      241 tqvgnwfknr rqrdraaaak nrlqhqaigp sgmrslaepg cpthgsaesp staaspttsv
      301 sslteradtg tsilsvtssd secdv
//
LOCUS       XP_061012286             165 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein uL11-like [Dama dama].
ACCESSION   XP_061012286
VERSION     XP_061012286.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156303.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..165
                     /product="large ribosomal subunit protein uL11-like"
                     /calculated_mol_wt=17812
     Region          1..165
                     /region_name="PLN03072"
                     /note="60S ribosomal protein L12; Provisional"
                     /db_xref="CDD:178621"
     CDS             1..165
                     /gene="LOC133065587"
                     /coded_by="XM_061156303.1:39..536"
                     /db_xref="GeneID:133065587"
ORIGIN      
        1 mppkfdpnei kvvylrctsg evgatsalap kigplglspk kvgddiakat gdwkglritv
       61 kltiqnrqaq ievvpsasal iikalkeppr drkkqknikh sgnitfdeiv niarqmrhrs
      121 larelsgtik eilgtaqhvg cnvdgrhphd iiddinsgav ecpds
//
LOCUS       XP_061012287             110 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein eL27-like [Dama dama].
ACCESSION   XP_061012287
VERSION     XP_061012287.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156304.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..110
                     /product="large ribosomal subunit protein eL27-like"
                     /calculated_mol_wt=11985
     Region          6..87
                     /region_name="KOW"
                     /note="an acronym for the authors' surnames (Kyrpides,
                     Ouzounis and Woese); cl00354"
                     /db_xref="CDD:469738"
     CDS             1..110
                     /gene="LOC133065593"
                     /coded_by="XM_061156304.1:727..1059"
                     /db_xref="GeneID:133065593"
ORIGIN      
        1 mskftkpgna mlalashyeg hkvvimknig dsssdtphrh allagthrsp ckvtaasakk
       61 kiakrskiks fvkvyhynhl rpttysvgip ldetvgnkdi frdpaikcka
//
LOCUS       XP_061012289             178 aa            linear   MAM 02-DEC-2023
DEFINITION  N-alpha-acetyltransferase 20-like [Dama dama].
ACCESSION   XP_061012289
VERSION     XP_061012289.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156306.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..178
                     /product="N-alpha-acetyltransferase 20-like"
                     /calculated_mol_wt=20199
     Region          12..128
                     /region_name="Acetyltransf_1"
                     /note="Acetyltransferase (GNAT) family; pfam00583"
                     /db_xref="CDD:395465"
     Site            order(77..79,89..90)
                     /site_type="other"
                     /note="Coenzyme A binding pocket [chemical binding]"
                     /db_xref="CDD:173926"
     CDS             1..178
                     /gene="LOC133065595"
                     /coded_by="XM_061156306.1:36..572"
                     /db_xref="GeneID:133065595"
ORIGIN      
        1 mttlraftcd dlfrfnninl dpltetygip fylqylahwp eyftvaeapg gelmgyimgk
       61 aegsvareew hghvtalsva pefrrlglaa klmelleeis erkggffvdl fvrvsnqvav
      121 nmykqlgysv yrtvieyhsa sngepdeday dmrkalsrdt ekksiiplph pvrpedie
//
LOCUS       XP_061012290             361 aa            linear   MAM 02-DEC-2023
DEFINITION  glutaminyl-peptide cyclotransferase [Dama dama].
ACCESSION   XP_061012290
VERSION     XP_061012290.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156307.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..361
                     /product="glutaminyl-peptide cyclotransferase"
                     /calculated_mol_wt=41048
     Region          53..358
                     /region_name="M28_QC_like"
                     /note="M28 Zn-peptidase glutaminyl cyclase; cd03880"
                     /db_xref="CDD:349876"
     Site            order(159,201..203,207,212..213,248..249,303..304,321,325,
                     329..330)
                     /site_type="active"
                     /db_xref="CDD:349876"
     CDS             1..361
                     /gene="QPCT"
                     /coded_by="XM_061156307.1:124..1209"
                     /db_xref="GeneID:133065596"
ORIGIN      
        1 maggrdprvv dtlhllllva alplavrgvr rgavdwtqek nyhqpallnv sslrqvaegt
       61 sisemwqndl rpllierypg spgsfaarqh imqriqrlqa dwvlevdtfl sqtpygyrsf
      121 sniistlnpt akrhlvlach ydskyfphwd hrvfvgatds avpcammlel araldkqlss
      181 lknisdsrpd lslqliffdg eeafhlwspq dslygsrhla skmastphpp gardtnqlhg
      241 mdllvlldli gapyptfpnf fpntarwfgr leavehelre lgllkdhsse rwyfrnsgyg
      301 gviqddhipf lrrgvpvlhl isspfpevwh tmddneenld rttidnlnki lqvfvleylh
      361 l
//
LOCUS       XP_061012291             663 aa            linear   MAM 02-DEC-2023
DEFINITION  vitrin [Dama dama].
ACCESSION   XP_061012291
VERSION     XP_061012291.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156308.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..663
                     /product="vitrin"
                     /calculated_mol_wt=72063
     Region          44..133
                     /region_name="LCCL"
                     /note="LCCL domain; pfam03815"
                     /db_xref="CDD:427521"
     Region          277..421
                     /region_name="vWA_collagen"
                     /note="von Willebrand factor (vWF) type A domain;
                     equivalent to the I-domain of integrins. This domain has a
                     variety of functions including: intermolecular adhesion,
                     cell migration, signalling, transcription, and DNA repair.
                     In integrins these domains form...; cd01472"
                     /db_xref="CDD:238749"
     Site            order(284,286,288,355,388)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238749"
     Site            order(286..288,290,355)
                     /site_type="active"
                     /note="integrin-collagen binding site [active]"
                     /db_xref="CDD:238749"
     Site            order(316,331..332,343..344,346..347)
                     /site_type="active"
                     /note="putative vWF-collagen binding site [active]"
                     /db_xref="CDD:238749"
     Region          479..639
                     /region_name="vWA_collagen"
                     /note="von Willebrand factor (vWF) type A domain;
                     equivalent to the I-domain of integrins. This domain has a
                     variety of functions including: intermolecular adhesion,
                     cell migration, signalling, transcription, and DNA repair.
                     In integrins these domains form...; cd01472"
                     /db_xref="CDD:238749"
     Site            order(486,488,490,557,587)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238749"
     Site            order(488..490,492,557)
                     /site_type="active"
                     /note="integrin-collagen binding site [active]"
                     /db_xref="CDD:238749"
     Site            order(518,533..534,545..546,548..549)
                     /site_type="active"
                     /note="putative vWF-collagen binding site [active]"
                     /db_xref="CDD:238749"
     CDS             1..663
                     /gene="VIT"
                     /coded_by="XM_061156308.1:220..2211"
                     /db_xref="GeneID:133065597"
ORIGIN      
        1 mgivvltmka sviemflvll vtgihsnqem mkkmkrpkft vpqiscdvra gkitnvefiv
       61 kcppgcqdpr yhvygtdvya syssvcgaav hsgvldnsgg kilvrkvagq sgykgsysng
      121 vrslslprwr esfvvsegkp qkgitypssl tyssskspaa kagetaradq spsvpgtaaq
      181 pvsvtqvpgt taieathtil pkpspsagft tsslrpqpvg qrskdlgepa lwkpesvlld
      241 adgggmekst vsrfvpkeel stqslepasq gdpsckvdls flidgsssig krrfriqkqf
      301 ltdvaqtldi gpagplmgvv qygdnpatqf nlkthmnsqd vkaaiekisq rgglsnagra
      361 isfvtknffs kvngnrggap nvavvmvdgw ptdkveeasr laresginif fitiegasen
      421 ekqymlepnf ankavcrtng fysltvqnwf slhktvqplv krvcdtdrla csktclnsad
      481 igfvidgsss vgtsnfrtvl qfvanlsref eisdtdtrig amqytyeqrl efgfdeystk
      541 sdvlnaikrv gywsggtstg aainyalell fkkskpnkrk lmilitdgrs yddiripaml
      601 ahhkgvitya igvawaaqde ldviathpar dhaffvdefd nlykivpkvi qnictefnsq
      661 prn
//
LOCUS       XP_061012292              92 aa            linear   MAM 02-DEC-2023
DEFINITION  small nuclear ribonucleoprotein E-like [Dama dama].
ACCESSION   XP_061012292
VERSION     XP_061012292.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156309.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..92
                     /product="small nuclear ribonucleoprotein E-like"
                     /calculated_mol_wt=10700
     Region          11..89
                     /region_name="Sm_E"
                     /note="Sm protein E; cd01718"
                     /db_xref="CDD:212465"
     Site            order(24,36,38,41,48..51,55,63,72,74,76..80,83..89)
                     /site_type="other"
                     /note="heptamer interface [polypeptide binding]"
                     /db_xref="CDD:212465"
     Site            order(33..39,41..53,55..59)
                     /site_type="other"
                     /note="Sm1 motif"
                     /db_xref="CDD:212465"
     Site            order(51,53..55,80,82)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:212465"
     Site            76..87
                     /site_type="other"
                     /note="Sm2 motif"
                     /db_xref="CDD:212465"
     CDS             1..92
                     /gene="LOC133065599"
                     /coded_by="XM_061156309.1:1..279"
                     /db_xref="GeneID:133065599"
ORIGIN      
        1 mayrgqgqkv qkvmvqpinl ifrylqnrlq iqvwlyeqvn mriegciigf deymnlvldn
       61 aeeihsktks rkqlgwimlk gdnitllqsv sn
//
LOCUS       XP_061012294             254 aa            linear   MAM 02-DEC-2023
DEFINITION  3-oxo-5-alpha-steroid 4-dehydrogenase 2 isoform X1 [Dama dama].
ACCESSION   XP_061012294
VERSION     XP_061012294.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156311.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..254
                     /product="3-oxo-5-alpha-steroid 4-dehydrogenase 2 isoform
                     X1"
                     /calculated_mol_wt=28433
     Region          105..254
                     /region_name="Steroid_dh"
                     /note="3-oxo-5-alpha-steroid 4-dehydrogenase; pfam02544"
                     /db_xref="CDD:460585"
     CDS             1..254
                     /gene="SRD5A2"
                     /coded_by="XM_061156311.1:19..783"
                     /db_xref="GeneID:133065601"
ORIGIN      
        1 msarcqqspv lagsatltal galvlylakp sgygkysenl mpaavrlpar aawflqelps
       61 favpagilaw qpssllgppa tvllglfcah yfhrtfvysl ltrgrpfpvv flfrgfafcl
      121 gngflqgyyl aycaeypaew ytdirfslgv flfilgmgin ihsdyilrql rkpgeiiyri
      181 pqgglftyvs ganflgeiie wigyalasws lpalafaffs lcflglrafh hhrfylkmfd
      241 dypksrrali pfif
//
LOCUS       XP_061012295             240 aa            linear   MAM 02-DEC-2023
DEFINITION  3-oxo-5-alpha-steroid 4-dehydrogenase 2 isoform X2 [Dama dama].
ACCESSION   XP_061012295
VERSION     XP_061012295.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156312.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..240
                     /product="3-oxo-5-alpha-steroid 4-dehydrogenase 2 isoform
                     X2"
                     /calculated_mol_wt=26427
     Region          105..>195
                     /region_name="Steroid_dh"
                     /note="3-oxo-5-alpha-steroid 4-dehydrogenase; pfam02544"
                     /db_xref="CDD:460585"
     CDS             1..240
                     /gene="SRD5A2"
                     /coded_by="XM_061156312.1:19..741"
                     /db_xref="GeneID:133065601"
ORIGIN      
        1 msarcqqspv lagsatltal galvlylakp sgygkysenl mpaavrlpar aawflqelps
       61 favpagilaw qpssllgppa tvllglfcah yfhrtfvysl ltrgrpfpvv flfrgfafcl
      121 gngflqgyyl aycaeypaew ytdirfslgv flfilgmgin ihsdyilrql rkpgeiiyri
      181 pqgglftyvs ganfldstsr clmttpslge psfhssfket keqgnkapmi llktikllnl
//
LOCUS       XP_061012296            1333 aa            linear   MAM 02-DEC-2023
DEFINITION  xanthine dehydrogenase/oxidase [Dama dama].
ACCESSION   XP_061012296
VERSION     XP_061012296.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156313.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1333
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1333
                     /product="xanthine dehydrogenase/oxidase"
                     /calculated_mol_wt=146815
     Region          23..1319
                     /region_name="PLN02906"
                     /note="xanthine dehydrogenase"
                     /db_xref="CDD:215491"
     CDS             1..1333
                     /gene="XDH"
                     /coded_by="XM_061156313.1:1..4002"
                     /db_xref="GeneID:133065602"
ORIGIN      
        1 mttdelvffv ngkkvvekna dpettllayl rrklglrgtk lgcgeggcga ctvmlskydr
       61 lqdkiihfsa naclapicsl hhvavttveg igstktrlhp vqeriakshg sqcgfctpgi
      121 vmsmytllrn qpeptveeie dafqgnlcrc tgyrpilqgf rtfaknggcc ggngnnpncc
      181 mnqkidhrvt lspslfnpee fmpldptqep ifppellrlk dippkqlrfe gervtwiqss
      241 tlkelldlka qypeaklvvg nteigiemkf knqlfpviic pawipelnsv ehgpegisfg
      301 aacplssvek tllkavaklp tqktevfrgv leqlrwfagk qvksvasigg niitaspisd
      361 lnpvfmasgt kltivsrgtr rtvpmdhtff psyrktllgp eeillsieip ysregeffsa
      421 fkqasrredd iakvtcgmrv lfqpgstqvk elalcyggma drtisalktt rrqlskfwne
      481 kllqdvcagl aeelalspda pggmiefrrt ltlsfffkfy ltvlkklgke dsedkcgkld
      541 ptytsatllf qkdppaniql fqevpkgqsk edtvgrplph laaamqasge avycddipcy
      601 enelflrlvt strahakiks idvseaqkvp gfvcflsadd ipgsnetglf ndetvfakdk
      661 vtcvghiiga vvadtpehaq raahgvkvty edlpaiitie daiknnsfyg selkiekgdl
      721 kkgfseadnv vsgelyiggq ehfymethct iavpkgeage melfvstqna tktqsfvakm
      781 lgvpvnrilv rvkrmgggfg gketrstlvt vavalaaykt ghpvrcmldr dedmlitggr
      841 hpflarykvg fmktgkival evdhysnagn sqdlshgime ralfhmdncy kipnirgtgr
      901 lcktnlssnt afrgfggpqa lfiaenwmse vavtcglpae evrrknlyke gdlthfnqrl
      961 eefsvprcwd eclkssqyyv rksevdkfnk kncwkkrglc iiptkfgisf tipflnqaga
     1021 lihvytdgsv lvshggtemg qglhtkmvqv asralkipts kiyisetstn tvpnssptaa
     1081 svstdvygqa iyeacqtilk rllpfkrknp dgswedwvma ayqdrvslsa tgfyrtpnlg
     1141 ysfetnsgna fhyftygvac seveidcltg dhknlrtdiv mdvgsslnpa idigqvegaf
     1201 vqglglftle elhyspegsl htrgpstyki pafgsiptef rvsllrdcpn kkaiyaskav
     1261 gepplflgas iffaikdair aaraqhtagn akklfrldsp atpekirnac vdkfttlcvt
     1321 cvpenckpws lrv
//
LOCUS       XP_061012297             201 aa            linear   MAM 02-DEC-2023
DEFINITION  factor in the germline alpha [Dama dama].
ACCESSION   XP_061012297
VERSION     XP_061012297.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156314.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..201
                     /product="factor in the germline alpha"
                     /calculated_mol_wt=22023
     Region          82..137
                     /region_name="bHLH_SF"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     cl00081"
                     /db_xref="CDD:469605"
     Site            order(89..90,92,97,117..118)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381392"
     Site            order(95..96,99..100,102..103,107,118..119,122..123,126,
                     128..129,132..133)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381392"
     CDS             1..201
                     /gene="FIGLA"
                     /coded_by="XM_061156314.1:1..606"
                     /db_xref="GeneID:133065606"
ORIGIN      
        1 mlagargpap egprrprgrp scpppplsam daapellrvp paellddvlr eqfgplpqqa
       61 ticrlkrlps stqdvqlvle rrrvanaker eriknlnhgl aklkalvpfl pqnrkpskvd
      121 ilrgateyiq vltdvleeak dsekrdpdhq syssstseph tssarqlsrd iiqhagcavg
      181 lknekegswa dggsgsfkye k
//
LOCUS       XP_061012298             608 aa            linear   MAM 02-DEC-2023
DEFINITION  C-type lectin domain family 4 member F [Dama dama].
ACCESSION   XP_061012298
VERSION     XP_061012298.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156315.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..608
                     /product="C-type lectin domain family 4 member F"
                     /calculated_mol_wt=67880
     Region          141..>464
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          479..603
                     /region_name="CLECT_DC-SIGN_like"
                     /note="C-type lectin-like domain (CTLD) of the type found
                     in human dendritic cell (DC)-specific intercellular
                     adhesion molecule 3-grabbing non-integrin (DC-SIGN) and
                     the related receptor, DC-SIGN receptor (DC-SIGNR);
                     cd03590"
                     /db_xref="CDD:153060"
     Site            order(532,567,569,579,589..592)
                     /site_type="other"
                     /note="carbohydrate binding site"
                     /db_xref="CDD:153060"
     Site            order(539,543,570,579..580)
                     /site_type="other"
                     /note="calcium binding site 1 [ion binding]"
                     /db_xref="CDD:153060"
     Site            order(543,580)
                     /site_type="other"
                     /note="calcium binding site 3 [ion binding]"
                     /db_xref="CDD:153060"
     CDS             1..608
                     /gene="CLEC4F"
                     /coded_by="XM_061156315.1:38..1864"
                     /db_xref="GeneID:133065607"
ORIGIN      
        1 mkeaemrvdq vhfctdnpsv slssqgldpa avvpaapkmp rrlkatlasl gvfmvfclvt
       61 lfvvalqhpr paletsayfq ellgdnhtgq fleepdypyh svrvvdlrea vrlfkghven
      121 astwsveiql ltcrvdnvss qiqmlggdle sasadiqmlk gllkdtstls fqtqllkssl
      181 eettseiqkl qgdleeanas nsqiqsffks slentsielh vlsrglenan teiqvlkagl
      241 etanaevrla nsslknvnaq ihvlrgnlds vsdlrahhqv lrsslestta emqrlkgslq
      301 danalnsqaq tfirgsldnt saqiqvlrsh leraggeihl lkrdlenvta qtqtanslle
      361 qtdaemrvlk telksaialg skiqvlngll rnasqeiqtl kqgmkdaval hsqtqmlers
      421 lqearteikt lrddlgntet ltttiqeqqr slegfrtala sqeqqlqrth nqllqlmvkd
      481 wksyngnlyy fssakktwqe aeqfcvshga hlasvtseee qafliqftgs vyywigltdr
      541 gtegrwrwtd dtpfdhagsr afwdqnqpdn wphgiersed cvqvqrkwnd iscsalcnwi
      601 cktpvgql
//
LOCUS       XP_061012299             287 aa            linear   MAM 02-DEC-2023
DEFINITION  ventral anterior homeobox 2 [Dama dama].
ACCESSION   XP_061012299
VERSION     XP_061012299.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156316.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..287
                     /product="ventral anterior homeobox 2"
                     /calculated_mol_wt=30584
     Region          99..155
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..287
                     /gene="VAX2"
                     /coded_by="XM_061156316.1:1..864"
                     /db_xref="GeneID:133065609"
ORIGIN      
        1 mgdggaerdr gparesrsgr grdgggaeds sadaggrspr eiagtsdssp agsresgads
       61 dgqpglgead hcrrilvrda kgtireivlp kgldldrpkr trtsftaeql yrlemefqrc
      121 qyvvgrerte larqlnlset qvkvwfqnrr tkqkkdqsrd lekresssas kafatsnilr
      181 llehgrllsv prapsllalt pgppglpagh rgtslgdprn ssphlnplts asaspplppp
      241 ppalcfsttp lldlpagyel gssafepysr ldrkvgspgs gskkana
//
LOCUS       XP_061012300             513 aa            linear   MAM 02-DEC-2023
DEFINITION  V-type proton ATPase subunit B, kidney isoform [Dama dama].
ACCESSION   XP_061012300
VERSION     XP_061012300.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156317.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..513
                     /product="V-type proton ATPase subunit B, kidney isoform"
                     /calculated_mol_wt=56594
     Region          40..504
                     /region_name="V-ATPase_V1_B"
                     /note="V-type (H+)-ATPase V1, B subunit; TIGR01040"
                     /db_xref="CDD:273410"
     CDS             1..513
                     /gene="ATP6V1B1"
                     /coded_by="XM_061156317.1:1..1542"
                     /db_xref="GeneID:133065610"
ORIGIN      
        1 maaevdsrpr glpgggaslg aarehvqavt rnyithprvt yrtvcsvngp lvvldqvkfa
       61 qyaeivnftl pngtqrsgqv levsgtkaiv qvfegtsgid aqkttceftg dilrtpvsed
      121 mlgrvfngsg kpidkgpvvm aedfldingq pinphdriyp eemietgisp idimnsiarg
      181 qkipifsaag lphneiaaqi crqaglvkks kavldyhddn faivfaamgv nmetarffks
      241 dfeqngtmgn vclflnland ptieriitpr lalttaefla yqcekhvlvi ltdmssyaea
      301 lrevsaaree vpgrrgfpgy mytdlatiye ragrvegrgg sitqipiltm pnddithpip
      361 dltgfitegq iyvdrqlhnr qiyppinvlp slsrlmksai gegmtrkdhg dvsnqlyacy
      421 aigkdvqamk avvgeealts edllyleflq kfeksfinqg pyekrsvfes ldlgwkllri
      481 fpkemlkrip qniidefysr egappdpepd tal
//
LOCUS       XP_061012301             285 aa            linear   MAM 02-DEC-2023
DEFINITION  homeobox protein EMX1 isoform X1 [Dama dama].
ACCESSION   XP_061012301
VERSION     XP_061012301.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156318.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..285
                     /product="homeobox protein EMX1 isoform X1"
                     /calculated_mol_wt=30866
     Region          188..244
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..285
                     /gene="EMX1"
                     /coded_by="XM_061156318.1:1..858"
                     /db_xref="GeneID:133065612"
ORIGIN      
        1 mclagctprt aaapgrgalp rarvprsala aatmfqptak rgftieslva kdggtgggtg
       61 agshplaaaa seeplrptal nyphpsaaea afvsgfpaaa gagrslyggp elvfpeamnh
      121 haltvhpahq lgasplqpph sffgaqhrdp lhfypwvlrn rffghrfqas dvpqdglllh
      181 gpfarkpkri rtafspsqll rlerafeknh yvvgaerkql agslslsetq vkvwfqnrrt
      241 kykrqkleee gpeseqkkkg shhinrwria tkqangedid vtsnd
//
LOCUS       XP_061012302             252 aa            linear   MAM 02-DEC-2023
DEFINITION  homeobox protein EMX1 isoform X2 [Dama dama].
ACCESSION   XP_061012302
VERSION     XP_061012302.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156319.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..252
                     /product="homeobox protein EMX1 isoform X2"
                     /calculated_mol_wt=27662
     Region          155..211
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..252
                     /gene="EMX1"
                     /coded_by="XM_061156319.1:1..759"
                     /db_xref="GeneID:133065612"
ORIGIN      
        1 mfqptakrgf tieslvakdg gtgggtgags hplaaaasee plrptalnyp hpsaaeaafv
       61 sgfpaaagag rslyggpelv fpeamnhhal tvhpahqlga splqpphsff gaqhrdplhf
      121 ypwvlrnrff ghrfqgddvp qdglllhgpf arkpkrirta fspsqllrle rafeknhyvv
      181 gaerkqlags lslsetqvkv wfqnrrtkyk rqkleeegpe seqkkkgshh inrwriatkq
      241 angedidvts nd
//
LOCUS       XP_061012303             863 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box only protein 41 [Dama dama].
ACCESSION   XP_061012303
VERSION     XP_061012303.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156320.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..863
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..863
                     /product="F-box only protein 41"
                     /calculated_mol_wt=93517
     Region          <191..>333
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          337..>546
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          536..582
                     /region_name="F-box_FBXO41"
                     /note="F-box domain found in F-box only protein 41
                     (FBXO41) and similar proteins; cd22109"
                     /db_xref="CDD:438881"
     Site            order(540,545,548..549,552..553,557,559..560,564..566,568)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438881"
     Region          648..674
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          675..701
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          702..733
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          734..758
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          759..785
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          786..810
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..863
                     /gene="FBXO41"
                     /coded_by="XM_061156320.1:1..2592"
                     /db_xref="GeneID:133065613"
ORIGIN      
        1 masldlpyrc prcgehkrfr slsslrahle yshtyetlyi lsktnsicdg aaaafplape
       61 paallavpga rrevfestsf qgkeqavgps paaphllhhh hhhaplahfp gdlvpaglpc
      121 eelaepglvp aaryalreie iplgelfark svassacstp ppgpgpgpcp gpasaspasp
      181 spadvayeeg larlkirale klevdrrler lseeveqkia gqvgrlqael erkaaeleta
      241 rqesarlgre keeleerase lsrqvdvsve llaslkqdlv hkeqelsrkq qevvqidqfl
      301 ketaareasa klrlqqfiee lleradraer qlqvissscg stpsaslgrg gggagagpst
      361 rapgrtrehh agpampstya vsrhgsspst gassripaas qssgcydsds lelprpeega
      421 pedsgpgglg trvqaanggs eraqpprssg lrrqaiqnwq rrprrhsteg eegdvsdvgs
      481 rtteseaegp sdiprpgpam agpvsscrls arpeggsgrg rraergspsr snevispeil
      541 kmraalfcif tyldtrtllh aaevcrdwrf varhpavwtr vllenarvcs kflamlaqwc
      601 tqahsltlqn lkprqrgkke skeeyarstr gcleaglesl lkaaggnlli lrishcpnil
      661 tdrslwlasc ycralqavty rsatdpvghe viwalgagcr eivslqvapl hpcqqpmrfs
      721 nrclqmigrc wphlralgvg gagcgvqgla slarncmrlq vleldhvsei tqevaaevcr
      781 eglkglemlv ltatpvtpka llhfnsicrn lksivvqigi adyfkepssp eaqklfedmv
      841 tklqalrrrp gfskilhikv egc
//
LOCUS       XP_061012304             483 aa            linear   MAM 02-DEC-2023
DEFINITION  early growth response protein 4 [Dama dama].
ACCESSION   XP_061012304
VERSION     XP_061012304.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156321.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..483
                     /product="early growth response protein 4"
                     /calculated_mol_wt=50234
     Region          377..401
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          379..401
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(386,388,390,392..393,396..397,400,414,416,420..421,
                     424..425,428,442,444,446,448..449,452..453,456)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          405..>463
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          409..429
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(409,412,425,429)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          437..457
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..483
                     /gene="EGR4"
                     /coded_by="XM_061156321.1:1..1452"
                     /db_xref="GeneID:133065615"
ORIGIN      
        1 mlhlsefsgp dallvksteg ccsepstdlt rlpardpsaa agypgagdfl swalsscgag
       61 eyltdsclle gpaptpppgl gysgsffiqa vpehphdpea lfnlmsgilg ltpfsgseaa
      121 asrspldasf sagsdallsg ppdlfspdlg aaafpeafwe aspsagapsq clyethlspp
      181 dvkpglrapp aspaldtasa fkgpyspwel lsagapgscg sqggyqaape arfpsmgaki
      241 edllsiscpa elpsgpasrl ytmgtydafp lapgdlgega eslpglltpp sgeggssgeg
      301 gefldgtqpe lsplglrsaa adfpkplvad ipassavpep sgpppapfpp akarrkgrrg
      361 gkcsarcfcp rphakafacp vescvrsfar sdelnrhlri htghkpfqcr iclrnfsrsd
      421 hltthvrtht gekpfacdvc grrfarsdek krhskvhlkq karaeerlkg lgfyslglsf
      481 aal
//
LOCUS       XP_061012305             259 aa            linear   MAM 02-DEC-2023
DEFINITION  polycomb group RING finger protein 1 [Dama dama].
ACCESSION   XP_061012305
VERSION     XP_061012305.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156322.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..259
                     /product="polycomb group RING finger protein 1"
                     /calculated_mol_wt=30169
     Region          36..106
                     /region_name="RING-HC_PCGF1"
                     /note="RING finger, HC subclass, found in polycomb group
                     RING finger protein 1 (PCGF1) and similar proteins;
                     cd16733"
                     /db_xref="CDD:438391"
     Site            order(46,50,52..53,56,58..59,61..65,68..71,73..74)
                     /site_type="other"
                     /note="putative heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:438391"
     Region          166..253
                     /region_name="RAWUL_PCGF1"
                     /note="RING finger- and WD40-associated ubiquitin-like
                     (RAWUL) domain found in polycomb group RING finger protein
                     1 (PCGF1) and similar proteins; cd17081"
                     /db_xref="CDD:340601"
     Site            order(166..170,188..194,196..198,202,205..206,209..210,
                     237..238)
                     /site_type="other"
                     /note="RAWUL-BCOR interaction site [polypeptide binding]"
                     /db_xref="CDD:340601"
     CDS             1..259
                     /gene="PCGF1"
                     /coded_by="XM_061156322.1:64..843"
                     /db_xref="GeneID:133065616"
ORIGIN      
        1 maspqggqia iamrlrnqlq svykmdplrn eeevrvkikd lnehivcclc agyfvdatti
       61 teclhtfcks civkylqtsk ycpmcnikih etqpllnlkl drvmqdivyk lvpglqdsee
      121 krirefyqsr gldrvtqpsg eepalsnlgl pfssfdhska hyyrydeqls lclerlssgk
      181 dknksilqnk yvrcsvraev rhlrrvlchr lmlnpqhvql lfdnevlpdh mtmkqiwlsh
      241 wfgkpsplll qysvkekrr
//
LOCUS       XP_061012307             407 aa            linear   MAM 02-DEC-2023
DEFINITION  substance-P receptor [Dama dama].
ACCESSION   XP_061012307
VERSION     XP_061012307.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156324.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..407
                     /product="substance-P receptor"
                     /calculated_mol_wt=46390
     Region          33..316
                     /region_name="7tmA_NK1R"
                     /note="neurokinin 1 receptor, member of the class A family
                     of seven-transmembrane G protein-coupled receptors;
                     cd16002"
                     /db_xref="CDD:320668"
     Region          34..60
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320668"
     Region          67..93
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320668"
     Site            order(89,92..93,105..110,112..113,116,159,161..165,193,
                     196..198,200..202,204..205,261,264..265,267..268,271,
                     283..284,286..288,291,294..295)
                     /site_type="other"
                     /note="putative peptide ligand binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:320668"
     Region          105..135
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320668"
     Region          146..167
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320668"
     Region          193..222
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320668"
     Region          241..271
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320668"
     Region          284..309
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320668"
     CDS             1..407
                     /gene="TACR1"
                     /coded_by="XM_061156324.1:108..1331"
                     /db_xref="GeneID:133065618"
ORIGIN      
        1 mdnvlpvdad lfpnistnis epnqfvqpaw qivlwaaayt vivvtsvvgn vvvmwiilah
       61 krmrtvtnyf lvnlafaeas maafntvvnf tyavhnewyy glfyckfhnf fpiaavfasi
      121 ysmtavafdr ymaiihplqp rlsatatkvv icviwilall lafpqgyyst tetmpnrvvc
      181 miewpehpnk iyekvyhicv tvliyflpll vigyaytvvg itlwaseipg dssdryheqv
      241 sakrkvvkmm ivvvctfaic wlpfhiffll pyinpdlyle kfiqqvylai mwlamsstmy
      301 npiiycclnd rfrlgfkhaf rccpfistge hegfemkstr ylqtqgsiyk vsrlettvst
      361 vvgaheedle egpkatpssl dqisndpshs dskttmesls fysnmls
//
LOCUS       XP_061012308             373 aa            linear   MAM 02-DEC-2023
DEFINITION  probable G-protein coupled receptor 45 [Dama dama].
ACCESSION   XP_061012308
VERSION     XP_061012308.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156325.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..373
                     /product="probable G-protein coupled receptor 45"
                     /calculated_mol_wt=41612
     Region          35..336
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          37..61
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          70..92
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          108..130
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          150..166
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          193..216
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          267..289
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          304..329
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..373
                     /gene="GPR45"
                     /coded_by="XM_061156325.1:365..1486"
                     /db_xref="GeneID:133065619"
ORIGIN      
        1 macnqssiet ytyllpngsh egdsrapppp aplrmslavl mmltvvvgfl gnavvciivy
       61 qrptmrsain lllatlafsd imlclccmpf tavtlitvhw hfgdsfcrls aalywffvle
      121 gvsillivsv drfliiaqrq drlnprrakv iiaaswalsf cvsapalagw tlvevparap
      181 qcvlgftelp agrayvltlv gaaffvpfav mlgahlgvlh avrknavrvh nqsdrldlrr
      241 lpraclrrlr rqqqqasldl sfktkaftti lilfvgfslc wlphsvysll svfsrrfycg
      301 psfyatsscv lglsylksvf npivycwrik kfreaclell pptfqilpkv perirrriqp
      361 stvyactenq sav
//
LOCUS       XP_061012309             500 aa            linear   MAM 02-DEC-2023
DEFINITION  POU domain, class 3, transcription factor 3 [Dama dama].
ACCESSION   XP_061012309
VERSION     XP_061012309.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156326.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..500
                     /product="POU domain, class 3, transcription factor 3"
                     /calculated_mol_wt=50107
     Region          314..388
                     /region_name="POU"
                     /note="Found in Pit-Oct-Unc transcription factors;
                     smart00352"
                     /db_xref="CDD:197673"
     Region          407..463
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..500
                     /gene="POU3F3"
                     /coded_by="XM_061156326.1:1..1503"
                     /db_xref="GeneID:133065620"
ORIGIN      
        1 mataasnpyl pgnsllaags ivhsdaagag ggggggaggg gggagggggg mqpgsaavts
       61 gayrgdpasv kmvqsdfmqg amaasngghm lshahqwvta lphaaaaaaa aaaaaveass
      121 pwsgsavgma gspqqppppp ppqgpdvkgg agredlhagt alhhrgpphl gpppppphqg
      181 hpggwgaaaa aaaaaaaaaa aahlpsmagg qqpppqslly sqpggftvng mlsappgpgg
      241 gggaggaggg gaqslvhpgl vrgdtpelae hhhhhhhhah phpphphhaq gpphhggggg
      301 agpglnshdp hsdedtptsd dleqfakqfk qrriklgftq advglalgtl ygnvfsqtti
      361 crfealqlsf knmcklkpll nkwleeadss tgsptsidki aaqgrkrkkr tsievsvkga
      421 leshflkcpk psaqeitnla dslqlekevv rvwfcnrrqk ekrmtppgiq qqtpddvysq
      481 vgpvsadtpp phhglqtsvq
//
LOCUS       XP_061012310             279 aa            linear   MAM 02-DEC-2023
DEFINITION  protein CREG2 [Dama dama].
ACCESSION   XP_061012310
VERSION     XP_061012310.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156327.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..279
                     /product="protein CREG2"
                     /calculated_mol_wt=30852
     Region          104..272
                     /region_name="Pyrid_oxidase_2"
                     /note="Pyridoxamine 5'-phosphate oxidase; pfam13883"
                     /db_xref="CDD:404723"
     CDS             1..279
                     /gene="CREG2"
                     /coded_by="XM_061156327.1:1..840"
                     /db_xref="GeneID:133065623"
ORIGIN      
        1 msrrrgrrpg prlswllwcg allspaagyv ivssvswavt nevdeeldga steealpall
       61 gdsgslwqrs fpasahkeda hlpppegaar arpppappgm fsypreggar lrpgiarfla
      121 hasawgclat vsahekipgl pfgtclpisd gpfdnstgip ffyvtpkdll vadlmknpma
      181 slllpesege fcrknivdpe dprcarlvlt gqmvavspee vefakqamfs rhpvmrkwpr
      241 pyewffmkmk iehiwlqkwy ggvadisree yfravprka
//
LOCUS       XP_061012311             197 aa            linear   MAM 02-DEC-2023
DEFINITION  lysozyme g-like protein 1 [Dama dama].
ACCESSION   XP_061012311
VERSION     XP_061012311.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156328.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..197
                     /product="lysozyme g-like protein 1"
                     /calculated_mol_wt=21431
     Region          38..197
                     /region_name="Lyz-like"
                     /note="lysozyme-like domains; cl00222"
                     /db_xref="CDD:469668"
     CDS             1..197
                     /gene="LYG1"
                     /coded_by="XM_061156328.1:19..612"
                     /db_xref="GeneID:133065625"
ORIGIN      
        1 msvlwlllgl lvltgssess swgcygdirt lhtpgascgi grrqglsycg vraserlaei
       61 dmpsllryrp vmrtvgqkyc mdpaviagvl srqshgsnvl anvdgvgdgv kvvqdpglya
      121 ptswiseaqv srvtevltvr ikeiqrrfpt wtpdqylrgg lcaytggagy irssqdlscd
      181 fcndvlarak yfkrqgf
//
LOCUS       XP_061012312             212 aa            linear   MAM 02-DEC-2023
DEFINITION  lysozyme g-like protein 2 [Dama dama].
ACCESSION   XP_061012312
VERSION     XP_061012312.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156329.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..212
                     /product="lysozyme g-like protein 2"
                     /calculated_mol_wt=23329
     Region          47..211
                     /region_name="GEWL"
                     /note="Goose egg-white lysozyme; cd01021"
                     /db_xref="CDD:381601"
     Site            order(105,127..129,132..133,151,155,179..180,182)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:381601"
     CDS             1..212
                     /gene="LYG2"
                     /coded_by="XM_061156329.1:1..639"
                     /db_xref="GeneID:133065627"
ORIGIN      
        1 mlyfalfggl fvligtsrgs htfthtmspr lhfrlyhgcy gdimtmdtpg vpcdntrlia
       61 cgirgsemfa emdlkalqsy qilikeiglr hcvdpaliaa iisreshggt illdgwdhtg
      121 lkfglmqldk nihhpvgtwd gkehllqavg iltdrikatq kkfpswsaaq hlkgglsafk
      181 sgteviatsa diqadyvndi larakfykkh gf
//
LOCUS       XP_061012313             706 aa            linear   MAM 02-DEC-2023
DEFINITION  cyclic nucleotide-gated cation channel alpha-3 [Dama dama].
ACCESSION   XP_061012313
VERSION     XP_061012313.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156330.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..706
                     /product="cyclic nucleotide-gated cation channel alpha-3"
                     /calculated_mol_wt=81082
     Region          187..429
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          501..617
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(567..568,583..585)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(605..607,611..613)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          617..686
                     /region_name="CLZ"
                     /note="C-terminal leucine zipper domain of cyclic
                     nucleotide-gated channels; pfam16526"
                     /db_xref="CDD:465160"
     CDS             1..706
                     /gene="CNGA3"
                     /coded_by="XM_061156330.1:141..2261"
                     /db_xref="GeneID:133065628"
ORIGIN      
        1 makistqysh ptrthpsvrt tdrdldciet glsrthlpce etsselqegi ametrglaes
       61 rqssftsqgp trlsrliill rawtprhlhq edqrpnsfle rfrgaelkev fsreshvqfn
      121 vgsqeppdrg rsdwplarnn tntcnnsekd ekankeekek keekkenpkk eekkkdrvvv
      181 dpssnmyyhw ltaiaapvfy nwcllvcrac fdelqsehlm lwlvldysad ilygldvlvr
      241 artgfleqgl mvtdtnrlwk hytktlhfkl dmlslvptdl ayfklgmnyp elrfnrllkl
      301 prlfeffdrt etrtnypnvf rignlvlyil iiihwnacvy faiskligfg tdswvypnis
      361 npeygrlsrk yiyslywstl tlttigetpp pvkdeeylfv vidflvgvli fativgnvgs
      421 misnmnasra efqakidsik qymqfrkvtk dletrvirwf dylwankktv dekevlkslp
      481 dklkaeiain vhldtlrkvr ifqdceagll velvlklrpa vfspgdyick kgdigremyi
      541 ikegklavva edgitqfvvl sdgsyfgeis ilnikgsksg nrrtanirsi gysdlfclsk
      601 ddlmealtey peakkaleek grqilmkdnl ideelakaga dpkdieekvv hleasldalq
      661 trfarllaey natqmkvkqr lsqlesqvkm glptdgdalq teasqq
//
LOCUS       XP_061012314             196 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein eL19-like [Dama dama].
ACCESSION   XP_061012314
VERSION     XP_061012314.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156331.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..196
                     /product="large ribosomal subunit protein eL19-like"
                     /calculated_mol_wt=23267
     Region          4..167
                     /region_name="Ribosomal_L19e_E"
                     /note="Ribosomal protein L19e, eukaryotic. L19e is found
                     in the large ribosomal subunit of eukaryotes and archaea.
                     L19e is distinct from the ribosomal subunit L19, which is
                     found in prokaryotes. It consists of two small globular
                     domains connected by an...; cd01417"
                     /db_xref="CDD:238705"
     Site            order(4,8..9,18..24,26,29,38,42,53,55..60,62,64,66..67,
                     69..70,72,74..79,81..89,92,95..97,100..101,103,110,
                     117..118,120..121,124..126,129,131,134..135)
                     /site_type="other"
                     /note="protein-rRNA interface [nucleotide binding]"
                     /db_xref="CDD:238705"
     Site            28..47
                     /site_type="active"
                     /note="putative translocon docking site [active]"
                     /db_xref="CDD:238705"
     Site            order(112..113,115..119,139..149)
                     /site_type="active"
                     /note="putative intersubunit bridge [active]"
                     /db_xref="CDD:238705"
     CDS             1..196
                     /gene="LOC133065629"
                     /coded_by="XM_061156331.1:1..591"
                     /db_xref="GeneID:133065629"
ORIGIN      
        1 msmlrlqkrl assvlrcgkk kvwldpnetn eiananshqq irklikdgli iqkpvtvhsr
       61 arcrkntlar rkgrhmgigk qkgtanarmp ekvtwmrrmr ilrrllrryr eskkidrhmy
      121 hslylkvkgn mfknklilme hihklkadka rkkfpadqae arrsktkear krreerlqak
      181 keeiiktlsk eeetkk
//
LOCUS       XP_061012316             242 aa            linear   MAM 02-DEC-2023
DEFINITION  B-cell receptor-associated protein 29-like [Dama dama].
ACCESSION   XP_061012316
VERSION     XP_061012316.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156333.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..242
                     /product="B-cell receptor-associated protein 29-like"
                     /calculated_mol_wt=28211
     Region          1..129
                     /region_name="Bap31"
                     /note="Bap31/Bap29 transmembrane region; pfam05529"
                     /db_xref="CDD:461673"
     Region          197..237
                     /region_name="Bap31_Bap29_C"
                     /note="Bap31/Bap29 cytoplasmic coiled-coil domain;
                     pfam18035"
                     /db_xref="CDD:465623"
     CDS             1..242
                     /gene="LOC133065631"
                     /coded_by="XM_061156333.1:1..729"
                     /db_xref="GeneID:133065631"
ORIGIN      
        1 mtlqwaavan fpyaeiglil ifclpfippq rwqkifsfsv wgkiasfwnk afltiiilli
       61 vlfldavrev rkyssthtie kssanrpaay ehtqmklfrs qrnlyisgfs lffwlvlrhl
      121 vtlitqlake lsnkgvlkrq veninqaakk fmeenerlkr llknygkeee hvleaenkkl
      181 edkeklktel kkasdalska qndvmimkmq serlskeydr llrersglqd ragkdkkcll
      241 tl
//
LOCUS       XP_061012317             289 aa            linear   MAM 02-DEC-2023
DEFINITION  calsenilin isoform X1 [Dama dama].
ACCESSION   XP_061012317
VERSION     XP_061012317.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156334.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..289
                     /product="calsenilin isoform X1"
                     /calculated_mol_wt=32996
     Region          140..274
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..289
                     /gene="KCNIP3"
                     /coded_by="XM_061156334.1:32..901"
                     /db_xref="GeneID:133065632"
ORIGIN      
        1 mrqlsarpav pfssaarrgs rrgsrqqfsr lsrmqrakev mkvsdgsllg epgrtplskk
       61 egvkwqrprl trqalmrccl vkwvlssaap qgsdssdsel elsavrhqpe gldqlqaqtk
      121 ftkkelqsly rgfknecptg lvdedtfkli ysqffpqgda ttyahflfna fdadgngair
      181 fedfvvglsi llrgtvhekl kwafnlydin kdgyitkeem laimksiydm mgrhtypilr
      241 edaplehver ffqkmdrnqd gvvtidefle tcqkdenims smqlfenvi
//
LOCUS       XP_061012318             230 aa            linear   MAM 02-DEC-2023
DEFINITION  calsenilin isoform X2 [Dama dama].
ACCESSION   XP_061012318
VERSION     XP_061012318.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156335.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..230
                     /product="calsenilin isoform X2"
                     /calculated_mol_wt=26284
     Region          81..215
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..230
                     /gene="KCNIP3"
                     /coded_by="XM_061156335.1:30..722"
                     /db_xref="GeneID:133065632"
ORIGIN      
        1 mgiqgmelca mavvvllfia vlkqfgilep msmedssdse lelsavrhqp egldqlqaqt
       61 kftkkelqsl yrgfknecpt glvdedtfkl iysqffpqgd attyahflfn afdadgngai
      121 rfedfvvgls illrgtvhek lkwafnlydi nkdgyitkee mlaimksiyd mmgrhtypil
      181 redaplehve rffqkmdrnq dgvvtidefl etcqkdenim ssmqlfenvi
//
LOCUS       XP_061012319             153 aa            linear   MAM 02-DEC-2023
DEFINITION  myelin and lymphocyte protein [Dama dama].
ACCESSION   XP_061012319
VERSION     XP_061012319.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156336.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..153
                     /product="myelin and lymphocyte protein"
                     /calculated_mol_wt=16761
     Region          19..145
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     CDS             1..153
                     /gene="LOC133065633"
                     /coded_by="XM_061156336.1:76..537"
                     /db_xref="GeneID:133065633"
ORIGIN      
        1 mapsaasgvs slpsgfavft tfpdllfife fvfgglvwil issshvpipl iqgwvmfasv
       61 fcfvattila flyvigahgn rtswitldaa yhsvaslfyf gasvlealat iqlqdgfyyk
      121 fyhenisavv fsyvatllyv vhamfslirw kss
//
LOCUS       XP_061012320              56 aa            linear   MAM 02-DEC-2023
DEFINITION  mitoregulin [Dama dama].
ACCESSION   XP_061012320
VERSION     XP_061012320.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156337.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..56
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..56
                     /product="mitoregulin"
                     /calculated_mol_wt=6353
     CDS             1..56
                     /gene="MTLN"
                     /coded_by="XM_061156337.1:38..208"
                     /db_xref="GeneID:133065634"
ORIGIN      
        1 madvsertlq lsvlvafasg vlvgwqanrl rrryldwrkk rlqdklaatq kkldla
//
LOCUS       XP_061012321             632 aa            linear   MAM 02-DEC-2023
DEFINITION  acyl-coenzyme A oxidase-like protein [Dama dama].
ACCESSION   XP_061012321
VERSION     XP_061012321.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156338.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..632
                     /product="acyl-coenzyme A oxidase-like protein"
                     /calculated_mol_wt=71363
     Region          59..597
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(82,112,114,152,154,395..397,399,401)
                     /site_type="active"
                     /db_xref="CDD:173839"
     CDS             1..632
                     /gene="ACOXL"
                     /coded_by="XM_061156338.1:73..1971"
                     /db_xref="GeneID:133065635"
ORIGIN      
        1 mtqsgkverl hilipydlnl demrtltfqr vtftmglpll kraiqdqver trkfvsrslv
       61 igevlstadm atgvkcgiiy wlfggavrnl ggpahvtqwl qplqeqkytg mfamterghg
      121 snvrgiqtea tfdfsaqefv intpckdaek myignamygn yaavfaqlii ngrsqgphcf
      181 ivpvrdehgr lhpgvtvvdm mhkeglhgvd ngilrfdnvr iprenlldkf gsvapdgqyl
      241 spikdesarf namlaaltps rlavtfqamg smklgltiai ryshsrrqfg pkareevkii
      301 ehqtqtlrlm phlatalalt fasryagtll dedifrgkel vssrplqalv aglkaystwe
      361 nvsclqdcre ctggmgymme nqisglkcdt dvfvtfegdn vvmlqvvvre llaqytkqye
      421 erpvssllrn waesgsdrlr tsflafnmdt vgnltfllka vhfrerilqr glvariyykv
      481 mtkkedffra wnsclhhitc lslahihqvt leqfclavrn cpdqedqall kkfcllygtk
      541 lvfqerawyl ehkyltpmts mrirrqllhl cdsvkddalr visafnisha slhapiagla
      601 npktawvlyp apqhslager arsprpklra kl
//
LOCUS       XP_061012322             439 aa            linear   MAM 02-DEC-2023
DEFINITION  fibulin-7 isoform X1 [Dama dama].
ACCESSION   XP_061012322
VERSION     XP_061012322.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156339.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..439
                     /product="fibulin-7 isoform X1"
                     /calculated_mol_wt=47539
     Region          81..135
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(91,108)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          136..172
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(136,139,153)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          224..269
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(224,227,246)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          270..304
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF domain; pfam07645"
                     /db_xref="CDD:429571"
     Site            order(270,273,289)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..439
                     /gene="FBLN7"
                     /coded_by="XM_061156339.1:141..1460"
                     /db_xref="GeneID:133065639"
ORIGIN      
        1 mvpkcpralf llllflacpe srasqnclnk qqfltairhl qqllkgqetr faegirhmks
       61 rlaalqssvs kagpdtppvs cpalnapldg qkfgskylmd hevhftcnpg frlvgpssvv
      121 clpngtwtge qprckdisec ssqpcqnggt cvegvnqykc icppgrtgsr cqhqaqtaap
      181 egseaadaaf sraprcaqve rtqhcsceag fhlsgaaads vcqdvnecel ygqegrprlc
      241 mhacvntpgs yrcvcpsgyr tladgksced vdecvspqpv cprgtvcint gggfqcvspe
      301 cpegssnvsy vktspfqcer npcpmdsrpc rhmpktisfh ylslpsnlkt pitlfrmata
      361 sapgrpgpns lrfgivggns rghfvmqrsd rqtgelilvq tlegpqtlev dvdmseyldr
      421 sfqashvskv tifvspydf
//
LOCUS       XP_061012323             439 aa            linear   MAM 02-DEC-2023
DEFINITION  fibulin-7 isoform X1 [Dama dama].
ACCESSION   XP_061012323
VERSION     XP_061012323.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156340.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..439
                     /product="fibulin-7 isoform X1"
                     /calculated_mol_wt=47539
     Region          81..135
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(91,108)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          136..172
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(136,139,153)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          224..269
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(224,227,246)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          270..304
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF domain; pfam07645"
                     /db_xref="CDD:429571"
     Site            order(270,273,289)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..439
                     /gene="FBLN7"
                     /coded_by="XM_061156340.1:179..1498"
                     /db_xref="GeneID:133065639"
ORIGIN      
        1 mvpkcpralf llllflacpe srasqnclnk qqfltairhl qqllkgqetr faegirhmks
       61 rlaalqssvs kagpdtppvs cpalnapldg qkfgskylmd hevhftcnpg frlvgpssvv
      121 clpngtwtge qprckdisec ssqpcqnggt cvegvnqykc icppgrtgsr cqhqaqtaap
      181 egseaadaaf sraprcaqve rtqhcsceag fhlsgaaads vcqdvnecel ygqegrprlc
      241 mhacvntpgs yrcvcpsgyr tladgksced vdecvspqpv cprgtvcint gggfqcvspe
      301 cpegssnvsy vktspfqcer npcpmdsrpc rhmpktisfh ylslpsnlkt pitlfrmata
      361 sapgrpgpns lrfgivggns rghfvmqrsd rqtgelilvq tlegpqtlev dvdmseyldr
      421 sfqashvskv tifvspydf
//
LOCUS       XP_061012325             382 aa            linear   MAM 02-DEC-2023
DEFINITION  fibulin-7 isoform X2 [Dama dama].
ACCESSION   XP_061012325
VERSION     XP_061012325.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156342.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..382
                     /product="fibulin-7 isoform X2"
                     /calculated_mol_wt=40978
     Region          24..78
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(34,51)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          79..115
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(79,82,96)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          167..212
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(167,170,189)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          213..247
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF domain; pfam07645"
                     /db_xref="CDD:429571"
     Site            order(213,216,232)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..382
                     /gene="FBLN7"
                     /coded_by="XM_061156342.1:255..1403"
                     /db_xref="GeneID:133065639"
ORIGIN      
        1 mksrlaalqs svskagpdtp pvscpalnap ldgqkfgsky lmdhevhftc npgfrlvgps
       61 svvclpngtw tgeqprckdi secssqpcqn ggtcvegvnq ykcicppgrt gsrcqhqaqt
      121 aapegseaad aafsraprca qvertqhcsc eagfhlsgaa adsvcqdvne celygqegrp
      181 rlcmhacvnt pgsyrcvcps gyrtladgks cedvdecvsp qpvcprgtvc intgggfqcv
      241 specpegssn vsyvktspfq cernpcpmds rpcrhmpkti sfhylslpsn lktpitlfrm
      301 atasapgrpg pnslrfgivg gnsrghfvmq rsdrqtgeli lvqtlegpqt levdvdmsey
      361 ldrsfqashv skvtifvspy df
//
LOCUS       XP_061012326             382 aa            linear   MAM 02-DEC-2023
DEFINITION  fibulin-7 isoform X2 [Dama dama].
ACCESSION   XP_061012326
VERSION     XP_061012326.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156343.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..382
                     /product="fibulin-7 isoform X2"
                     /calculated_mol_wt=40978
     Region          24..78
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(34,51)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          79..115
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(79,82,96)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          167..212
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(167,170,189)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          213..247
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF domain; pfam07645"
                     /db_xref="CDD:429571"
     Site            order(213,216,232)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..382
                     /gene="FBLN7"
                     /coded_by="XM_061156343.1:173..1321"
                     /db_xref="GeneID:133065639"
ORIGIN      
        1 mksrlaalqs svskagpdtp pvscpalnap ldgqkfgsky lmdhevhftc npgfrlvgps
       61 svvclpngtw tgeqprckdi secssqpcqn ggtcvegvnq ykcicppgrt gsrcqhqaqt
      121 aapegseaad aafsraprca qvertqhcsc eagfhlsgaa adsvcqdvne celygqegrp
      181 rlcmhacvnt pgsyrcvcps gyrtladgks cedvdecvsp qpvcprgtvc intgggfqcv
      241 specpegssn vsyvktspfq cernpcpmds rpcrhmpkti sfhylslpsn lktpitlfrm
      301 atasapgrpg pnslrfgivg gnsrghfvmq rsdrqtgeli lvqtlegpqt levdvdmsey
      361 ldrsfqashv skvtifvspy df
//
LOCUS       XP_061012327             308 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4C3D-like [Dama dama].
ACCESSION   XP_061012327
VERSION     XP_061012327.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156344.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..308
                     /product="olfactory receptor 4C3D-like"
                     /calculated_mol_wt=34513
     Region          39..292
                     /region_name="7tmA_OR4A-like"
                     /note="olfactory receptor 4A and related proteins, member
                     of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15939"
                     /db_xref="CDD:320605"
     Region          60..86
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320605"
     Site            order(82,85..86,98..103,105..106,109,154,156..160,196,
                     199..201,203..205,207..208,252,255..256,258..259,262,
                     266..267,269..271,274,277..278)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320605"
     Region          98..128
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320605"
     Region          141..162
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320605"
     Region          196..226
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320605"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320605"
     Region          267..292
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320605"
     CDS             1..308
                     /gene="LOC133065640"
                     /coded_by="XM_061156344.1:1..927"
                     /db_xref="GeneID:133065640"
ORIGIN      
        1 mdvltlpnnv tefvllgltq nphlqkilfi vflfiflftv lanlliviti slnptlsapm
       61 yfflthlsfl dafftcvstp kliidllrqr rtisrggclt qlfvehflga seiilliama
      121 ydryaaickp lhyttimrkg lcqllvvvsw iggilhatvq ilfmvdltfc gpnvidhfmc
      181 dffslmelac sdtyqpgmvv atnsggmcvl ifsmllvsyi vilsslkshg segrrkalst
      241 cgshftvvvc ffvpcilthl rpvatyrtdk wvavffaift pmlnpiiytv rnaevknamr
      301 sllkkrit
//
LOCUS       XP_061012328             311 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4S2 [Dama dama].
ACCESSION   XP_061012328
VERSION     XP_061012328.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156345.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..311
                     /product="olfactory receptor 4S2"
                     /calculated_mol_wt=35053
     Region          24..289
                     /region_name="7tmA_OR4A-like"
                     /note="olfactory receptor 4A and related proteins, member
                     of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15939"
                     /db_xref="CDD:320605"
     Region          24..50
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320605"
     Region          57..83
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320605"
     Site            order(79,82..83,95..100,102..103,106,151,153..157,193,
                     196..198,200..202,204..205,249,252..253,255..256,259,
                     263..264,266..268,271,274..275)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320605"
     Region          95..125
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320605"
     Region          138..159
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320605"
     Region          193..223
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320605"
     Region          229..259
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320605"
     Region          264..289
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320605"
     CDS             1..311
                     /gene="LOC133065644"
                     /coded_by="XM_061156345.1:1..936"
                     /db_xref="GeneID:133065644"
ORIGIN      
        1 mekisnvtef vflglsqnie ieevcfvvfs ffyivillgn lliiltvcvg nlfkspmyff
       61 lnylsfvdic yssvtapkmi vgllakrkti syvgcmlqlf gvhffgctei filtvmaydr
      121 yvaickplwy mtimdrdrcn kmllgtwigg flhsiiqval vvqlpfcgpn eidhyfcdvh
      181 pvlklactdt yvvggvvtan sgtialgsfv illisytiil vslrkqsaeg rrkalstcgs
      241 hiavviiffg pctfmymrpd ttfsedkmva vfytiitpml npliytlrna evknamkklw
      301 grrvfweang k
//
LOCUS       XP_061012329             310 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4C11-like [Dama dama].
ACCESSION   XP_061012329
VERSION     XP_061012329.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156346.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..310
                     /product="olfactory receptor 4C11-like"
                     /calculated_mol_wt=34875
     Region          23..289
                     /region_name="7tmA_OR4A-like"
                     /note="olfactory receptor 4A and related proteins, member
                     of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15939"
                     /db_xref="CDD:320605"
     Region          24..50
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320605"
     Region          57..83
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320605"
     Site            order(79,82..83,95..100,102..103,106,151,153..157,193,
                     196..198,200..202,204..205,249,252..253,255..256,259,
                     263..264,266..268,271,274..275)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320605"
     Region          95..125
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320605"
     Region          138..159
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320605"
     Region          193..223
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320605"
     Region          229..259
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320605"
     Region          264..289
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320605"
     CDS             1..310
                     /gene="LOC133065645"
                     /coded_by="XM_061156346.1:1..933"
                     /db_xref="GeneID:133065645"
ORIGIN      
        1 mqmknnvtef illgltqdpv rkkmvfvifl ifylgtlvgn lliittikts ralgspmyff
       61 lfhlslsdtc fstciaprmi vdallkkvti sfnecivqif sfhffgclei filvlmavdr
      121 yvaickplry tnimshqvcg vlvavawvgs cvhssaqill tlslpfcgpn vidhylcdlq
      181 pllqlactdt yvtnlllvsn sgaictvsfv mlmfsyaiil hslrnhsaeg rrkalstcis
      241 hiivvilffv pcmfiytrpa ttfpmdkmit vfytigtpll npliytlrna evknamrmlw
      301 sknlisddkr
//
LOCUS       XP_061012330             309 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4C46-like [Dama dama].
ACCESSION   XP_061012330
VERSION     XP_061012330.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156347.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083691) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="11"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..309
                     /product="olfactory receptor 4C46-like"
                     /calculated_mol_wt=34696
     Region          23..289
                     /region_name="7tmA_OR4A-like"
                     /note="olfactory receptor 4A and related proteins, member
                     of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15939"
                     /db_xref="CDD:320605"
     Region          24..50
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320605"
     Region          57..83
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320605"
     Site            order(79,82..83,95..100,102..103,106,151,153..157,193,
                     196..198,200..202,204..205,249,252..253,255..256,259,
                     263..264,266..268,271,274..275)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320605"
     Region          95..125
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320605"
     Region          138..159
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320605"
     Region          193..223
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320605"
     Region          229..259
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320605"
     Region          264..289
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320605"
     CDS             1..309
                     /gene="LOC133065649"
                     /coded_by="XM_061156347.1:1..930"
                     /db_xref="GeneID:133065649"
ORIGIN      
        1 menrnnmtef illgltqnpm mqkviftvfl vvyivsvvgn vltlvtitts pllgspmyff
       61 lahlsfidvc yscvstpkli vvplhekkts sfiecmcqif gehlfagadi illtamaydr
      121 yvaickplhy ttimtwqvcw llvgvawagg flhatiqilf lfrlpfcgpn vidhfmcdln
      181 pllelactdt htlglfvaan sgficllifl llissytvil lslrtrslev rqkalstlis
      241 hiteillffv psiftylrpa vtlpvdkava vfytmitpml npliytlrnd qmknairklc
      301 srkvissdq
//
LOCUS       XP_061012345             304 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: surfeit locus protein 1-like [Dama dama].
ACCESSION   XP_061012345
VERSION     XP_061012345.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156362.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 2% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..304
                     /product="LOW QUALITY PROTEIN: surfeit locus protein
                     1-like"
                     /calculated_mol_wt=33726
     Region          78..292
                     /region_name="SURF1"
                     /note="SURF1 superfamily. Surf1/Shy1 has been implicated
                     in the posttranslational steps of the biogenesis of the
                     mitochondrially-encoded Cox1 subunit of cytochrome c
                     oxidase (complex IV). Cytochrome c oxidase (complex IV),
                     the terminal electron-transferring...; cd06662"
                     /db_xref="CDD:119401"
     CDS             1..304
                     /gene="LOC133065856"
                     /coded_by="XM_061156362.1:1..915"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:133065856"
ORIGIN      
        1 msklglraag lrpllraaga gttpasvvwr svlgiaprag lawrparcgs ssaeatatks
       61 edesflrwfl llipvtafgl gtwqvqrrkw klqliaeles rvmaepiplp adpmelknle
      121 yrpvkvrghf dhskexymmp rtmvdparea reagqlssaa esgayvvtpf hctelgitil
      181 vnrgfvprrk vnpdtrhkgq iegevdlvgm vrltetrkpf vpennpernh whyrdleama
      241 rltgaepifi dadfkstvpg gpiggqtrvs lrnehlqyii twyglcaats ylwckrflsr
      301 tpgv
//
LOCUS       XP_061012346             149 aa            linear   MAM 02-DEC-2023
DEFINITION  histone H3.3A-like [Dama dama].
ACCESSION   XP_061012346
VERSION     XP_061012346.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156363.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..149
                     /product="histone H3.3A-like"
                     /calculated_mol_wt=16704
     Region          14..149
                     /region_name="PTZ00018"
                     /note="histone H3; Provisional"
                     /db_xref="CDD:185400"
     Site            order(53..61,63,77..80,83,86,97..100,130..132,134)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:467036"
     Site            order(58,61,64..65,68..69,71,73,75..76,80..81,83..85,
                     87..88,90,92,95..99,101..102,105..106,109..111,113..115,
                     117..119,122,131..135,139,142)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:467036"
     Site            order(62,65..66,69..70,72,108,112,115,122,126,131)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467036"
     Site            order(120,123..124,127..128,130,136..137,140..141,
                     143..145)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:467036"
     CDS             1..149
                     /gene="LOC133065860"
                     /coded_by="XM_061156363.1:1..450"
                     /db_xref="GeneID:133065860"
ORIGIN      
        1 milpvfahgg lytvartrqt arkltsgkap rkqlatkaar ksapstggvk kphryrpgtv
       61 alreirryqk steflirklp fqrlvweisq dfktdlrfqs aaigalqeas eaylvglfed
      121 tnlcashakr vtimpkdiql arrirgera
//
LOCUS       XP_061012348             326 aa            linear   MAM 02-DEC-2023
DEFINITION  catenin alpha-1-like [Dama dama].
ACCESSION   XP_061012348
VERSION     XP_061012348.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156365.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..326
                     /product="catenin alpha-1-like"
                     /calculated_mol_wt=35945
     Region          <6..287
                     /region_name="Vinculin"
                     /note="Vinculin family; pfam01044"
                     /db_xref="CDD:460040"
     CDS             1..326
                     /gene="LOC133065862"
                     /coded_by="XM_061156365.1:1..981"
                     /db_xref="GeneID:133065862"
ORIGIN      
        1 mggaerfteq veaavealss dpaqpmdese fidasrlvyd girdirkavl mirtpeeldd
       61 sdfetedfdv rsrtsvqted dqliagqsar aimaqlpqeq kakiaeqvas fqeeksklda
      121 evskwddsgn diivlakqmc mimmemtdft rgkgplknts dvisaakkia eagsrmdklg
      181 rtiadhcpds ackqdllayl qrialychql nicskvkaev qnlggelvvs gvdsamsliq
      241 aaknlmnavv qtvkasymas tkyqksqgma slnlpavswk mkapekkplv krekqdemqt
      301 kikrasqkkh vnpvqalsef kamdsi
//
LOCUS       XP_061012350             332 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: olfactory receptor 6J1 [Dama dama].
ACCESSION   XP_061012350
VERSION     XP_061012350.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156367.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 2% of CDS bases
            frameshifts          :: corrected 5 indels
            internal stop codons :: corrected 1 genomic stop codons
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..332
                     /product="LOW QUALITY PROTEIN: olfactory receptor 6J1"
                     /calculated_mol_wt=36280
     Region          46..293
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          61..83
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          99..121
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          144..160
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          196..219
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          238..260
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          269..293
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..332
                     /gene="LOC133065869"
                     /coded_by="XM_061156367.1:1..999"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 5 bases in 4 codons;
                     deleted 1 base in 1 codon; substituted 1 base at 1 genomic
                     stop codon"
                     /db_xref="GeneID:133065869"
ORIGIN      
        1 mahgeqsapv mefillgfpl srqvellslv lllpmflltl lgnllvisvv lsftrphtsm
       61 yfflcnlsil dilftsvisp kxlanlvsgd ktisfagcit qcyfyfflgt aefllltvms
      121 yncyaticyp lwystimrpp vcirtvvfsw vgafisvlfp tilisqlpfc dsniinhfcd
      181 sgxllapaca dttaielmdf mlssmvilcc ivlvafsymy iflttvsips asgrkkafxt
      241 cashltivvi sssimvficv tpsqkeylev nkvpsvlsxv tpflnpfiyt lrndtvlkvl
      301 rdvxwvragl ekrmrtmlrr gvssvsdhrg gg
//
LOCUS       XP_061012351             494 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: eukaryotic translation initiation factor 2
            subunit 3-like [Dama dama].
ACCESSION   XP_061012351
VERSION     XP_061012351.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156368.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 2% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..494
                     /product="LOW QUALITY PROTEIN: eukaryotic translation
                     initiation factor 2 subunit 3-like"
                     /calculated_mol_wt=53747
     Region          37..488
                     /region_name="PTZ00327"
                     /note="eukaryotic translation initiation factor 2 gamma
                     subunit; Provisional"
                     /db_xref="CDD:240362"
     CDS             1..494
                     /gene="LOC133065872"
                     /coded_by="XM_061156368.1:1..1485"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:133065872"
ORIGIN      
        1 mgwnletekg grieiqwlal warwrggeag vtlgqlhlsr qdlatldvsk ltplshevis
       61 rratvnigti ghvahgkstv vkaisgvhtv rfknelerni tiklgsanak iyklddpscp
      121 qpkcyrscgs stpdefptdi pgtkgnfklv rhvsfvdcpg hdilmatmln gaavmdaall
      181 livgnesypq pqisehlaai eimklkhili lqnkidlvke sqakeqyeqi lafvqgtvae
      241 gapiipisaq lkynievvye yivkkipvpp rdftseprli virsfdvnkp gcevddlkgg
      301 vasgsilkgv lkvgqetevr pgivskdseg klmckpifsk ivslfaehdd lqyaapggli
      361 gvgtkidstl craermvgqv lgavgalpei fteleisyfl lrwllgvlte gdkktakvqk
      421 xknevcmvni gslstggrvn avkadlgkiv lthpvctevg ekvalsrrve khwhligwgq
      481 irrgvtikpt vddd
//
LOCUS       XP_061012352             331 aa            linear   MAM 02-DEC-2023
DEFINITION  histone-lysine N-methyltransferase PRDM9-like [Dama dama].
ACCESSION   XP_061012352
VERSION     XP_061012352.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156369.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 17% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..331
                     /product="histone-lysine N-methyltransferase PRDM9-like"
                     /calculated_mol_wt=37048
     Region          51..81
                     /region_name="SSXRD"
                     /note="SSXRD motif; pfam09514"
                     /db_xref="CDD:430657"
     Region          120..248
                     /region_name="PR-SET_PRDM7_9"
                     /note="PR-SET domain found in PR domain zinc finger
                     protein 7 (PRDM7) and 9 (PRDM9) and similar proteins;
                     cd19193"
                     /db_xref="CDD:380970"
     Site            order(133,136..138,156,167..168,170..174,184,197..201,203,
                     212..213,237..238,240..241,244..245)
                     /site_type="active"
                     /db_xref="CDD:380970"
     Site            order(133,136..138,170..171,197..201,203,237,241,245)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380970"
     CDS             1..331
                     /gene="LOC133065879"
                     /coded_by="XM_061156369.1:1..996"
                     /db_xref="GeneID:133065879"
ORIGIN      
        1 mggtdlelll shagqdtqpp agplelraqm qfclstappp rrrlsglaaq lrgketgvkr
       61 yslwerkghv yqevsepqdd dylyceecqn ffidscaahg pptfvkdcav ekghanrsal
      121 tlppglsirl sgipdpglgv wneasdlplg lhfgpyegqi tddeeaakse yawlitkgrn
      181 cyeyvdgkdt swanwmryvn carddeeqnl vafqyhgqif yrtcqvvrpg cellvwygde
      241 yvqdlgikrd srgkselaag repkpkihpc sscslafssq kflnkhtqrs hpsqtllrps
      301 erdllqpeyp cpgnqnqrys dphspsdkpd g
//
LOCUS       XP_061012353             286 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4C3D-like [Dama dama].
ACCESSION   XP_061012353
VERSION     XP_061012353.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156370.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..286
                     /product="olfactory receptor 4C3D-like"
                     /calculated_mol_wt=31844
     Region          8..254
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          25..47
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          63..85
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          108..124
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          161..186
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          204..222
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          229..254
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..286
                     /gene="LOC133065884"
                     /coded_by="XM_061156370.1:1..861"
                     /db_xref="GeneID:133065884"
ORIGIN      
        1 mpgryaslli vitislsptl sapmyfflty lafihasyts vitpkmvidl lyqrrtvswg
       61 gcltqmfleh flggseiill tvmaydryva ickplhytti irqglcqllv vvawtggilh
      121 atvqilltvd ltfcgskvid hfmcdffsvl qlarsdtywl gmvvaahsvg mlsliffffl
      181 llssytvils slkshgsegq nkslstcsah ftvvvpcifg ytrpvatypg dklvavffai
      241 lapilnpiiy tvrntlserc herfvdagae nfleykgnvl fcyikt
//
LOCUS       XP_061012354             308 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4C3D-like [Dama dama].
ACCESSION   XP_061012354
VERSION     XP_061012354.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156371.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..308
                     /product="olfactory receptor 4C3D-like"
                     /calculated_mol_wt=34558
     Region          39..292
                     /region_name="7tmA_OR4A-like"
                     /note="olfactory receptor 4A and related proteins, member
                     of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15939"
                     /db_xref="CDD:320605"
     Region          60..86
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320605"
     Site            order(82,85..86,98..103,105..106,109,154,156..160,196,
                     199..201,203..205,207..208,252,255..256,258..259,262,
                     266..267,269..271,274,277..278)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320605"
     Region          98..128
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320605"
     Region          141..162
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320605"
     Region          196..226
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320605"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320605"
     Region          267..292
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320605"
     CDS             1..308
                     /gene="LOC133065885"
                     /coded_by="XM_061156371.1:131..1057"
                     /db_xref="GeneID:133065885"
ORIGIN      
        1 mdvlrppnnv tevvllgltq nphlqkilfi vflfiflftl vanlliviti sfsptlsapm
       61 yffltylafi dafytsattp kmtidllyqr rtiswhgcls qlflvqflgg seitvlivma
      121 ydryvgickp lhyvtitrqe vcqllvvval iggilhatvq ilftvdltfc ghhvmdhfmc
      181 dffslldiac shthtlgmvv aansgamcll ifflllisyi vilsslkshg segrrkalst
      241 cgshftvval yfvpcifsym rpvttypgdk lvsvffiilt pmlnpiiytv rntdvknamw
      301 sllkrrva
//
LOCUS       XP_061012355             307 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4C3D-like [Dama dama].
ACCESSION   XP_061012355
VERSION     XP_061012355.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156372.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..307
                     /product="olfactory receptor 4C3D-like"
                     /calculated_mol_wt=34281
     Region          25..291
                     /region_name="7tmA_OR4A-like"
                     /note="olfactory receptor 4A and related proteins, member
                     of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15939"
                     /db_xref="CDD:320605"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320605"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320605"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320605"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320605"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320605"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320605"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320605"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320605"
     CDS             1..307
                     /gene="LOC133065886"
                     /coded_by="XM_061156372.1:1..924"
                     /db_xref="GeneID:133065886"
ORIGIN      
        1 mdpmsphnvt kfvllgltqn phlqkilfvv flfillftvl anllivitis lsptlsapmy
       61 fflthlsfld asltsvttpk liidllyqrt tiswgacltq lfmehflags evtilivmay
      121 dryvaickpl hyttimrqgl crllvvvvwt ggilhatvqi vftmdlifcg pnvidhfmcd
      181 ffsllelacn styrlgivva antggmclli fsmllvsyav ilsslkshgs egrrkalstc
      241 aahftvvvms fvpciftytr pvavyptdkw mtvffailtp mfnpiiytvr nievktairn
      301 llkrgvi
//
LOCUS       XP_061012356             656 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase MARK2-like [Dama dama].
ACCESSION   XP_061012356
VERSION     XP_061012356.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156373.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 46% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..656
                     /product="serine/threonine-protein kinase MARK2-like"
                     /calculated_mol_wt=71711
     Region          17..266
                     /region_name="STKc_AMPK-like"
                     /note="Catalytic domain of AMP-activated protein
                     kinase-like Serine/Threonine Kinases; cd14003"
                     /db_xref="CDD:270905"
     Site            order(24..28,32,45,47,77,93..96,100,102..103,105,138..139,
                     141,143..144,146,155..156,159,173..177,179,209..212)
                     /site_type="active"
                     /db_xref="CDD:270905"
     Site            order(24..27,32,45,47,77,93..96,100,143..144,146,155..156)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270905"
     Site            order(100,102..103,105,139,141,143,159,173..177,179,
                     209..212)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270905"
     Site            order(155..166,170..177)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270905"
     CDS             1..656
                     /gene="LOC133065891"
                     /coded_by="XM_061156373.1:82..2052"
                     /db_xref="GeneID:133065891"
ORIGIN      
        1 mqdftaistn kmariadydi fytigegqsa kvklarhrlt ralvaikive kteqpnlrql
       61 frevralrsv nkhrnivqlv eiidteetlf limehlsggd latyleaqgy lteeeargvf
      121 rqlvsalrhc hrrgvvhrdv kpgnilleas kikladfgls gqwhpgrkln tfcgtpvyma
      181 pelflrlpyt gpevdvwslg vvlytlvtgs vpftgrdfre vrdcirtghy hvpedlsgev
      241 kdlirrmlrl npanratldd vrhhpwlnvg lesplppayg dypgvtmgmt lgwsrdqiqg
      301 rhtstgrdwt vpkvrartif vrpavsldls seehtppasp evstlipgwl weateqenqe
      361 srektrepat pspcpearti tpssapstrs treersapat dragdrhdtc garlacdacg
      421 grdsshtrdt sftrdtrdac gtslphdaps tqdatgacdr edargarvpr dtrgardtgl
      481 tcdtslphda pstqdatgac htedargarv prdtrdardt sltcdtslph dapstqdatg
      541 achtedarga rvprdtrgar dtggahgtqd phatvtrdar gtcdvsseth cppdvpaags
      601 stlagqpqnl spvtppgltq kkkgvagriw rgllkhlccg lpskrgkkvs petprg
//
LOCUS       XP_061012358             967 aa            linear   MAM 02-DEC-2023
DEFINITION  collagen alpha-1(I) chain-like [Dama dama].
ACCESSION   XP_061012358
VERSION     XP_061012358.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156375.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..967
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..967
                     /product="collagen alpha-1(I) chain-like"
                     /calculated_mol_wt=96185
     Region          <149..560
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <450..840
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..967
                     /gene="LOC133065892"
                     /coded_by="XM_061156375.1:1..2904"
                     /db_xref="GeneID:133065892"
ORIGIN      
        1 mrpaswgsek hshlraphsp lpsrppcdtr rdqasqreih pstgdggpep gspttgagpg
       61 qtaaawearp lltglagagr egnapssqel ggksrgtecg sgsppqplts lvslgaflia
      121 sealvfspvt ghppdyprrg lrqqisifsk vqrldvqeqg vaglvpglad gcllrgssgf
      181 sarphgssrg pqgssagpqg sspglrgplr vlmgppralr gpprvprgpp qvpsgphrvp
      241 rgppqvprgp prvprgppqv fgvlcasswv lpgpsgvlrg spgvlprspv vltgspgvlp
      301 rspgvlrgsp gvlprssvvl tgspgvlprs pvvltgspgv lprspvvlrg spgvlprspv
      361 vlrgspgvlp gpsgvlrgsp gvlprspvvl rgspgvlpgp sgvlrgspgv lprspvvltg
      421 spgvlprssv vltgspgvlp rssvvltgsp gsspgpqgpp rvprgppqvp sgpprvprvl
      481 prspvvltgs pgsspgpqws spgpqgphrv prgpprvpsg phrvprvlpg spgsspghqg
      541 pprvpsgphr vprgppqvps gphrvprgpp qvlsgpprvp rvlpgspgvl prspvvltgs
      601 pgvlprssvv lpgspgsspg pqgpprvprv lpgspgvlpr spvvltgspg vlprspgssp
      661 gpqgsspgpq wsspgpqgpp rvprvlrgsp gsspgpqgss pgpqwsspgp qgsspgpqgp
      721 prvprvlrgs pgsspgpqgs spgpqwsspg pqgpprvprv lrgspgsspg pqwsspgpqg
      781 pprvpsgppr vprvlrgspg sspgphgssr gpqgssagpq gppqvpsgpp qvprvlpgsp
      841 vvlpgspgss pgpqgppppg gaqapppgng ggprawsvgw raqpglsasg vrskalhfld
      901 getesrgsrh csrgwgapgl rappvcpell aarprggrgd gpglgkgrip gprlqprprt
      961 rpraaas
//
LOCUS       XP_061012359            1089 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: uncharacterized protein LOC133065893, partial
            [Dama dama].
ACCESSION   XP_061012359
VERSION     XP_061012359.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156376.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 1% of CDS bases
            frameshifts          :: corrected 1 indel
            internal stop codons :: corrected 2 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         <1..>1089
                     /product="LOW QUALITY PROTEIN: uncharacterized protein
                     LOC133065893"
     Region          1..172
                     /region_name="Gag_p30"
                     /note="Gag P30 core shell protein; pfam02093"
                     /db_xref="CDD:426597"
     Region          251..267
                     /region_name="ZnF_C2HC"
                     /note="zinc finger; smart00343"
                     /db_xref="CDD:197667"
     Region          308..389
                     /region_name="RP_RTVL_H_like"
                     /note="Retropepsin of the RTVL_H family of human
                     endogenous retrovirus-like elements; cd06095"
                     /db_xref="CDD:133159"
     Site            order(322,324,326,344..346,382)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133159"
     Site            322..324
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133159"
     Site            322
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133159"
     Region          474..689
                     /region_name="RT_ZFREV_like"
                     /note="A subfamily of reverse transcriptases (RTs) found
                     in sequences similar to the intact endogenous retrovirus
                     ZFERV from zebrafish and to Moloney murine leukemia virus
                     RT. An RT gene is usually indicative of a mobile element
                     such as a retrotransposon or...; cd03715"
                     /db_xref="CDD:239685"
     Site            order(480..481,515,529..532,535..536,607)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:239685"
     Site            order(566..571,606..607,638,640..641,685..686)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:239685"
     Site            order(566..571,606,640)
                     /site_type="other"
                     /note="putative NTP binding site [chemical binding]"
                     /db_xref="CDD:239685"
     Region          777..882
                     /region_name="RT_RNaseH"
                     /note="RNase H-like domain found in reverse transcriptase;
                     pfam17917"
                     /db_xref="CDD:465565"
     Region          937..1067
                     /region_name="RNase_HI_RT_Bel"
                     /note="Bel/Pao family of RNase HI in long-term repeat
                     retroelements; cd09273"
                     /db_xref="CDD:260005"
     Site            order(941..944,975..977,980,1001,1052)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:260005"
     CDS             1..1089
                     /gene="LOC133065893"
                     /coded_by="XM_061156376.1:<1..>3267"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon;
                     substituted 2 bases at 2 genomic stop codons"
                     /db_xref="GeneID:133065893"
ORIGIN      
        1 dpilfthnpt wddcqqllqv lftteereqi laearkrvpg vdgrptaqph lvnegfpllr
       61 pnwdferveg rerlrvyrqt lmaglrxptn lakvnlvrqe ptespaafle rlmeafrqyt
      121 pmdpqaeesr taillafvnq aapdirkklq kveglgeqti qdllkvaerv fnnretpeer
      181 eerirreere laekirkedk ehrarenrkn qkelaqilfa gikagtelre prnprtgeke
      241 kpkrqalkkd qcsyckeqgh wknecpkrds krgmtqreki ppgtrvlyag edsdxrsrds
      301 aplpeswvti hvegkpvgfm vdtgaqhsvl nkklgpmskk tslvqgatgt krycxtterk
      361 vnlgthqvsh sflvipecpa pllgrdlltk vnaqihfdpg gmsvteglgp pihvlslalr
      421 deyrlfapkp setialdvqp wvhkyplawa etagmglakq rhpvvielka eaipvrvrqy
      481 pmsqearqgi tphirrlmea gilrrcqspw ntpllpvkkp ggtdyrpvqd lrevnkrvsd
      541 ihptvpnpyt llssllpeyt wytvldlkda ffslplavqs qeifafewte gegqpvvqlt
      601 wtrlpqgfkn sptlfneals edlyeyrach pevillqyvd dlmlagttee acscatgdll
      661 qtlgilgyra sakkaqiarq evtylgykir qgqrwltqam ketilqipep knprqvrefl
      721 gtvgycrlwi mgfaekarpl yegsketpkw twtepmkqaf qtlrrallea palalpnpnk
      781 pfqlfvdekq gigkgvltqq wgpwkrpvay lskrldpvaa gwppclriia atallvrdad
      841 kltygqqlsv ytphavegvl kqppgkwisn arlthyqall ldaprvhfqt lcslnpatll
      901 pnpekdsplh ecseilaeal aarkdltdvp lsnselvwft dgssyvkdgq rkagaaivdd
      961 sgrtiwaeal ppntsaqkae lialiqaleq akgkrvtift dsryafstah iqgpiyqerg
     1021 frtaegkevk nlpeirrlle avqlpravai vhvpghqkge dpktrgncaa daaareaasw
     1081 dyaapilav
//
LOCUS       XP_061012360             238 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133065895 [Dama dama].
ACCESSION   XP_061012360
VERSION     XP_061012360.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156377.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..238
                     /product="uncharacterized protein LOC133065895"
                     /calculated_mol_wt=24457
     Region          <100..146
                     /region_name="Gag_p30"
                     /note="Gag P30 core shell protein; pfam02093"
                     /db_xref="CDD:426597"
     Region          159..>206
                     /region_name="PTZ00368"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional"
                     /db_xref="CDD:173561"
     CDS             1..238
                     /gene="LOC133065895"
                     /coded_by="XM_061156377.1:1..717"
                     /db_xref="GeneID:133065895"
ORIGIN      
        1 mapppyaspt apspssrvpa pspstpapfa papapeaspp arilrplpls cilpfppslp
       61 srlrlaptla piatlqgppl pspspatppa tssrsrgpgp dspesptgaa tlanhfisqs
      121 apdirrklak aedgpqtpir dlqtqalvaa lqpaagsgpq npppgacfkc gqeghwakmc
      181 pnpqppskpc llckqrgywa sncpqasrap tsrgqgpehp reiscppsal ellsfddd
//
LOCUS       XP_061012361             363 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133065896, partial [Dama dama].
ACCESSION   XP_061012361
VERSION     XP_061012361.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156378.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 29% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..>363
                     /product="uncharacterized protein LOC133065896"
     CDS             1..363
                     /gene="LOC133065896"
                     /coded_by="XM_061156378.1:1..>1089"
                     /db_xref="GeneID:133065896"
ORIGIN      
        1 mcflvpgcda qraasaqksr allslinhgi rstkqelgfk nrhwvrsevr irgglikkte
       61 geeevmpgws kernccpgap dlttenagrv lntasqqqsh pgwagsiqar qaapgrcgss
      121 vsgylwvfrr pemkyflkpi svfltylvwv fgltlarsrs wrvwefdsdi isvvfiglwe
      181 afyrqkfnvs gvmvelpiys vinsswvvsn evsygqglml lanftmsval ifssvallvs
      241 rvkapypdfl rlcyrasall lffscacati tvswnftvdf ygqttldfpi tfplerelvt
      301 kkhlsyvfpl gittsilllv tallfscerc sikppkrtkk keeagkrkgr rkrkskkkek
      361 rke
//
LOCUS       XP_061012362             378 aa            linear   MAM 02-DEC-2023
DEFINITION  collagen alpha-1(I) chain-like [Dama dama].
ACCESSION   XP_061012362
VERSION     XP_061012362.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156379.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..378
                     /product="collagen alpha-1(I) chain-like"
                     /calculated_mol_wt=40077
     Region          12..>227
                     /region_name="PRK12678"
                     /note="transcription termination factor Rho; Provisional"
                     /db_xref="CDD:237171"
     Region          <153..373
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     CDS             1..378
                     /gene="LOC133065897"
                     /coded_by="XM_061156379.1:1..1137"
                     /db_xref="GeneID:133065897"
ORIGIN      
        1 mpgplrtsqd prgqarmapg qvrtargqag maprtdqggp gdrpgqtrtv pgtgqdqprq
       61 prgqartped kpgplrtgqd gprtggdgtr tgqnrpgrpc eqagtalrtg edrrgrpedr
      121 wgwprgqagv aprtgqdshk drpaqaktap rtgqdgpgdr pgqtrtapgt gqdgprrprg
      181 qartaprrgq hrpgqprgqa rtpedkpgpp rtgqdgpgtd qdgpgdrpgw aktaprtsqd
      241 spkdrpaqak tvprtgqdgp edrpgrpedr paqartapgt gqdgpedrpg wprgqastgq
      301 dgpedrpgwp rgqartatrt gqhrprwprg harmaprtgq dgpaqartgq dgpgtgddpr
      361 eqvrtaprsd gdqregqa
//
LOCUS       XP_061012364             408 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: isthmin-2 [Dama dama].
ACCESSION   XP_061012364
VERSION     XP_061012364.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156381.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 15% of CDS bases
            frameshifts :: corrected 3 indels
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..408
                     /product="LOW QUALITY PROTEIN: isthmin-2"
                     /calculated_mol_wt=45001
     Region          183..>216
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          247..396
                     /region_name="AMOP"
                     /note="AMOP domain; cl02758"
                     /db_xref="CDD:470667"
     CDS             1..408
                     /gene="ISM2"
                     /coded_by="XM_061156381.1:1..1227"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon;
                     deleted 2 bases in 2 codons"
                     /db_xref="GeneID:133065903"
ORIGIN      
        1 mrqqheaaal havqrmewql tvqeldpagh kslcvnevps yvpmvdvndd fatievvaep
       61 qaelemdpma epnnrwsega prwlpteell qplfwgcsdg kegrtllkgr apgeggeeqe
      121 eeedhppeds egedqeedse ehgeddqepg fsgaaggweq gplfpgdwaf eepdhydyql
      181 reewspwspc sgscgscsqr rtlrvplass lphgtedkdp lglpsegwqp lahdamdmls
      241 pnmgsgekwl ncksdflaky lsqvlralps cpcaypleav ssavslrdeh qgrsfrrsda
      301 sxpqehldvy rptahsacaf cstpaaqhcc ydagsqlltr gkgagapdlv stnvlpelhf
      361 kvdtllwipc kadcsryhav wtpnngraca dnppeeeyla qlqeakey
//
LOCUS       XP_061012365             208 aa            linear   MAM 02-DEC-2023
DEFINITION  stAR-related lipid transfer protein 4-like isoform X1 [Dama dama].
ACCESSION   XP_061012365
VERSION     XP_061012365.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156382.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..208
                     /product="stAR-related lipid transfer protein 4-like
                     isoform X1"
                     /calculated_mol_wt=23536
     Region          5..206
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     Site            order(53,55,57,66..68,70..71,86,97,99,101,103,118,120,122,
                     131,133,152..153,155,157,169,171,173,175,186..190,
                     192..193,196..198,201)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176854"
     CDS             1..208
                     /gene="LOC133065905"
                     /coded_by="XM_061156382.1:259..885"
                     /db_xref="GeneID:133065905"
ORIGIN      
        1 mealpdvavl atrlkntliq yhnledekwr vakktkdvti wrkpseefng ylfkaqgvid
       61 dvvnslidhi rpgpcrldwd slmtsldile hfeenccvmr yttagqlwni isprefvdfs
      121 ytvgykegll scgisldwse krsefvrgyn hpcgwfcvpl kespsrsllt gciqtdlrgm
      181 ipqsavdtam astlinlcgd lqralkka
//
LOCUS       XP_061012366             199 aa            linear   MAM 02-DEC-2023
DEFINITION  stAR-related lipid transfer protein 4-like isoform X2 [Dama dama].
ACCESSION   XP_061012366
VERSION     XP_061012366.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156383.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..199
                     /product="stAR-related lipid transfer protein 4-like
                     isoform X2"
                     /calculated_mol_wt=22665
     Region          5..190
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     Site            order(53,55,57,66..68,70..71,86,97,99,101,103,118,120,122,
                     131,133,152..153,155,157,169,171,173,175,186..190)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176854"
     CDS             1..199
                     /gene="LOC133065905"
                     /coded_by="XM_061156383.1:259..858"
                     /db_xref="GeneID:133065905"
ORIGIN      
        1 mealpdvavl atrlkntliq yhnledekwr vakktkdvti wrkpseefng ylfkaqgvid
       61 dvvnslidhi rpgpcrldwd slmtsldile hfeenccvmr yttagqlwni isprefvdfs
      121 ytvgykegll scgisldwse krsefvrgyn hpcgwfcvpl kespsrsllt gciqtdlrgm
      181 ipqsavdtam dilstlrln
//
LOCUS       XP_061012367             891 aa            linear   MAM 02-DEC-2023
DEFINITION  histone-lysine N-methyltransferase PRDM9-like [Dama dama].
ACCESSION   XP_061012367
VERSION     XP_061012367.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156384.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..891
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..891
                     /product="histone-lysine N-methyltransferase PRDM9-like"
                     /calculated_mol_wt=100998
     Region          27..85
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          171..201
                     /region_name="SSXRD"
                     /note="SSXRD motif; pfam09514"
                     /db_xref="CDD:430657"
     Region          240..366
                     /region_name="PR-SET_PRDM7_9"
                     /note="PR-SET domain found in PR domain zinc finger
                     protein 7 (PRDM7) and 9 (PRDM9) and similar proteins;
                     cd19193"
                     /db_xref="CDD:380970"
     Site            order(253,256..258,276,287..288,290..294,304,317..321,323,
                     332..333,357..358,360..361,364..365)
                     /site_type="active"
                     /db_xref="CDD:380970"
     Site            order(253,256..258,290..291,317..321,323,357,361,365)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380970"
     Region          <365..679
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          525..543
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          538..888
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          551..571
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(556,558,560,562..563,566..567,570,584,586,590..591,
                     594..595,598,612,614,616,618..619,622..623,626)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          579..599
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(579,582,595,599)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          607..627
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          635..655
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          663..683
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(668,670,672,674..675,678..679,682,696,698,702..703,
                     706..707,710,724,726,728,730..731,734..735,738)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          691..711
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(691,694,707,711)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          719..739
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          747..767
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(752,754,756,758..759,762..763,766,780,782,786..787,
                     790..791,794,808,810,812,814..815,818..819,822)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          775..795
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(775,778,791,795)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          803..823
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          831..851
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(831,834,847,851)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          859..879
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..891
                     /gene="LOC133065907"
                     /coded_by="XM_061156384.1:1..2676"
                     /db_xref="GeneID:133065907"
ORIGIN      
        1 mrpnrspees tegdagrtkw kptmrdafkd isvyfskeew eemgewekir yrnvkrnyea
       61 liaigfratr pdfmhhrrqv ikpqvddted sdeewtprkr gkpslmafrv ehskhqkrms
      121 taplskessl kelpgaaksl ktsgskqaqk pvphhrktrt pvqhprqkve lrgketgvrr
      181 yslrerkghv yqevsepqdd dylyceecqn ffidscaahg pptfvkdcav ekghanrsal
      241 mlppglsirl sgipdaglgv wneasdlplg lhfgpyegqi tddeeaaksg ytwlitkgrk
      301 cyeyvdgkdt swanwmryvn carddqeqnl vafqyhgqif yrtcqvirpg sellvwygde
      361 ygqdlgnkrn srgkrelaag repkpkihpc ascslafssq kflsqhtqrs hpsqtllrps
      421 erdllqtedp cpgnqnqrys dphspsdkpe ghktkarpqd llksvrlkri srvssyspgg
      481 qmggsgvher vteepstskk lnpedtgtll tgaevsgimr vtygecgqgs kdrstlithe
      541 stqtgnkpyv cgecgrsfsq ksalirhqrt htgekpyvcg ecgrsfsqks alirhqrtht
      601 gekpyvcgec grsfhhgsnl ishkrthtge kpyvcgecgr sfslksflit hqrthtgekp
      661 hvcgecgrsf srnsvlirhq rthtgekpyv cgecgrsfsr ksvlirhqrt htgekpyvcr
      721 ecgpgfshks vlirhqrtha gekpyvcgec grsfrqksal irhqtthtge kphvcgecgq
      781 sfshksvlir hqrthagekp yvcgecgrsf rqksalirhq rthtgekphv cgecgrsfsr
      841 ksilirqqrt htgekphvcg ecgrtfsqks vlirhhrtht gekpyvcrec e
//
LOCUS       XP_061012368             312 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 5J3-like [Dama dama].
ACCESSION   XP_061012368
VERSION     XP_061012368.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156385.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..312
                     /product="olfactory receptor 5J3-like"
                     /calculated_mol_wt=35050
     Region          25..303
                     /region_name="7tmA_OR5J-like"
                     /note="olfactory receptor subfamily 5J and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15415"
                     /db_xref="CDD:320537"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320537"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320537"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,252,255..256,258..259,262,
                     268..269,271..273,276,279..280)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320537"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320537"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320537"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320537"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320537"
     Region          269..294
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320537"
     CDS             1..312
                     /gene="LOC133065908"
                     /coded_by="XM_061156385.1:1..939"
                     /db_xref="GeneID:133065908"
ORIGIN      
        1 madwnhtgvk efllvglten sklqvplfll fffiysitli gnwgmiilic lnaqlhtpmy
       61 lflgnlsfcd icystvfapk mlvnflsehk sstftgcvlq sfffalyvtt egvllsmmay
      121 dcyvaiakpl lytvimtqrv ciqmvllsyl gglinsltht igllkldccg pnivnhyfcd
      181 ippllklscs dahnnemlll ifsgviamft fiiimvsyih imiaiqrist aegrhkafst
      241 cashltavtl fygsvtfsyi qpssqysleq ekvsavfytl vipmlnpliy slrnkdvkda
      301 akrsiwqkrt st
//
LOCUS       XP_061012369             141 aa            linear   MAM 02-DEC-2023
DEFINITION  nuclear nucleic acid-binding protein C1D [Dama dama].
ACCESSION   XP_061012369
VERSION     XP_061012369.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156386.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..141
                     /product="nuclear nucleic acid-binding protein C1D"
                     /calculated_mol_wt=15853
     Region          27..96
                     /region_name="Sas10_Utp3"
                     /note="Sas10/Utp3/C1D family; pfam04000"
                     /db_xref="CDD:461123"
     CDS             1..141
                     /gene="LOC133065911"
                     /coded_by="XM_061156386.1:39..464"
                     /db_xref="GeneID:133065911"
ORIGIN      
        1 mageginedy pveiheylsa fensigavde mlktmmsvsr nellqkldpl eqakvdlvsa
       61 ytlnsmfwvy latqgvnpke hpvkqeleri rvymnrvkei tdkkkagkld rgaasrfvkn
      121 alwepkpkna skvankgksk n
//
LOCUS       XP_061012370             886 aa            linear   MAM 02-DEC-2023
DEFINITION  GPI ethanolamine phosphate transferase 2-like isoform X1 [Dama
            dama].
ACCESSION   XP_061012370
VERSION     XP_061012370.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156387.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..886
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..886
                     /product="GPI ethanolamine phosphate transferase 2-like
                     isoform X1"
                     /calculated_mol_wt=97806
     Region          60..333
                     /region_name="GPI_EPT_2"
                     /note="GPI ethanolamine phosphate transferase 2; PIG-G;
                     cd16024"
                     /db_xref="CDD:293748"
     Site            order(72..73,113,217,266..267)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293748"
     Site            order(72,113,217,267)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293748"
     CDS             1..886
                     /gene="LOC133065912"
                     /coded_by="XM_061156387.1:142..2802"
                     /db_xref="GeneID:133065912"
ORIGIN      
        1 mrlgsgtfaa gcvvievlgv alflrgffpt pvfsgaerqa espapepsag assnwtelpp
       61 plfskvviml idalrddfvf gskgvkfmpy ttylvekgss lsfvaeakpp tvtmprikal
      121 ltgslpgfid vvrnlnsptl lednvitrak aagkriifyg detwvklfpk hfveydgtts
      181 ffvsdytevd nnvtrhldkv lkrqdwdvli lhylgldhig hisgpnspli ghklsemdsi
      241 lmkihtslls eerdtllpsl lvlcgdhgms eagghgassm eevntalvli ssaferkpgd
      301 vrhpthvqqt dlaatlsigl glpipksnig slmfpvlegr pmreqlrllh lntvqlskll
      361 qenvpsyeke pgfeqfkvse rshgnwirly leennsevlf nlgarvrrqy ldalrtlrls
      421 lskraaqydi ysmaagtimv levlalllls vpqalgsrae ldvpllspvc sllfclllla
      481 laalhvavct aadsscylcs lpwpaaggvm altaallcav vsaltrtfag gkclsqnppq
      541 stsrwseldl lsflgtvghv lslgassfie eehqtwyfli ntlclalchq iyrncflgdd
      601 capqrcphmg eefdgvtval qgkragregw elsrapadps slealrgpew wmvlaspwlv
      661 laccrllrpl nqtgvqwahr pdlghwlass dhkaelsvla vlslamifvl vqkrcsltsk
      721 vamafgllgi ycyraaignv lfpwkqdnkd vskgitearf vyvfvlgilf tgtkdllksq
      781 iiaadftart vglweiysgl vllaalllrp hnlpvlvlsl aiqtimtqfi wrplrhnite
      841 vtvmhywfgq affyfqgeeh ehreleshml itpsrekkdf slpaae
//
LOCUS       XP_061012371             871 aa            linear   MAM 02-DEC-2023
DEFINITION  GPI ethanolamine phosphate transferase 2-like isoform X2 [Dama
            dama].
ACCESSION   XP_061012371
VERSION     XP_061012371.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156388.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..871
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..871
                     /product="GPI ethanolamine phosphate transferase 2-like
                     isoform X2"
                     /calculated_mol_wt=96071
     Region          60..333
                     /region_name="GPI_EPT_2"
                     /note="GPI ethanolamine phosphate transferase 2; PIG-G;
                     cd16024"
                     /db_xref="CDD:293748"
     Site            order(72..73,113,217,266..267)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293748"
     Site            order(72,113,217,267)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293748"
     CDS             1..871
                     /gene="LOC133065912"
                     /coded_by="XM_061156388.1:142..2757"
                     /db_xref="GeneID:133065912"
ORIGIN      
        1 mrlgsgtfaa gcvvievlgv alflrgffpt pvfsgaerqa espapepsag assnwtelpp
       61 plfskvviml idalrddfvf gskgvkfmpy ttylvekgss lsfvaeakpp tvtmprikal
      121 ltgslpgfid vvrnlnsptl lednvitrak aagkriifyg detwvklfpk hfveydgtts
      181 ffvsdytevd nnvtrhldkv lkrqdwdvli lhylgldhig hisgpnspli ghklsemdsi
      241 lmkihtslls eerdtllpsl lvlcgdhgms eagghgassm eevntalvli ssaferkpgd
      301 vrhpthvqqt dlaatlsigl glpipksnig slmfpvlegr pmreqlrllh lntvqlskll
      361 qenvpsyeke pgfeqfkvse rshgnwirly leennsevlf nlgarvrrqy ldalrtlrls
      421 lskraaqydi ysmaagtimv levlalllls vpqalgsrae ldvpllspvc sllfclllla
      481 laalhvavct aadsscylcs lpwpaaggvm altaallcav vsaltrtfag gkclsqnppq
      541 stsrwseldl lsflgtvghv lslgassfie eehqtwyfli ntlclalchq iyrncflgdd
      601 capqrcphmg eefdgvtval qgkragregw elsrapadps slealrgpew wmvlaspwlv
      661 laccrllrpl nqtgvqwahr pdlghwlass dhkaelsvla vlslamifvl vqkrcsltsk
      721 vamafgllgi ycyraaignv lfpwkqdnkd vskgitearf vyvfvlgilf tgtkdllksq
      781 iiaadftart vglweiysgl vllaalllrp hnlpvlvlsl aiqtimtqfi wrplrhnite
      841 vtvmhywfgq affyfqvaev lelqlqhqsf q
//
LOCUS       XP_061012372             860 aa            linear   MAM 02-DEC-2023
DEFINITION  GPI ethanolamine phosphate transferase 2-like isoform X3 [Dama
            dama].
ACCESSION   XP_061012372
VERSION     XP_061012372.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156389.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..860
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..860
                     /product="GPI ethanolamine phosphate transferase 2-like
                     isoform X3"
                     /calculated_mol_wt=94835
     Region          60..333
                     /region_name="GPI_EPT_2"
                     /note="GPI ethanolamine phosphate transferase 2; PIG-G;
                     cd16024"
                     /db_xref="CDD:293748"
     Site            order(72..73,113,217,266..267)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293748"
     Site            order(72,113,217,267)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293748"
     CDS             1..860
                     /gene="LOC133065912"
                     /coded_by="XM_061156389.1:142..2724"
                     /db_xref="GeneID:133065912"
ORIGIN      
        1 mrlgsgtfaa gcvvievlgv alflrgffpt pvfsgaerqa espapepsag assnwtelpp
       61 plfskvviml idalrddfvf gskgvkfmpy ttylvekgss lsfvaeakpp tvtmprikal
      121 ltgslpgfid vvrnlnsptl lednvitrak aagkriifyg detwvklfpk hfveydgtts
      181 ffvsdytevd nnvtrhldkv lkrqdwdvli lhylgldhig hisgpnspli ghklsemdsi
      241 lmkihtslls eerdtllpsl lvlcgdhgms eagghgassm eevntalvli ssaferkpgd
      301 vrhpthvqqt dlaatlsigl glpipksnig slmfpvlegr pmreqlrllh lntvqlskll
      361 qenvpsyeke pgfeqfkvse rshgnwirly leennsevlf nlgarvrrqy ldalrtlrls
      421 lskraaqydi ysmaagtimv levlalllls vpqalgsrae ldvpllspvc sllfclllla
      481 laalhvavct aadsscylcs lpwpaaggvm altaallcav vsaltrtfag gkclsqnppq
      541 stsrwseldl lsflgtvghv lslgassfie eehqtwyfli ntlclalchq iyrncflgdd
      601 capqrcphmg eefdgvtval qgkragregw elsrapadps slealrgpew wmvlaspwlv
      661 laccrllrpl nqtgvqwahr pdlghwlass dhkaelsvla vlslamifvl vqkrcsltsk
      721 vamafgllgi ycyraaignv lfpwkqdnkd vskgitearf vyvfvlgilf tgtkdllksq
      781 iiaadftart vglweiysgl vllaalllrp hnlpvlvlsl aiqtimtqfi wrplrhnite
      841 vtvmhywfgq affyfqekek
//
LOCUS       XP_061012373             857 aa            linear   MAM 02-DEC-2023
DEFINITION  GPI ethanolamine phosphate transferase 2-like isoform X4 [Dama
            dama].
ACCESSION   XP_061012373
VERSION     XP_061012373.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156390.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..857
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..857
                     /product="GPI ethanolamine phosphate transferase 2-like
                     isoform X4"
                     /calculated_mol_wt=94435
     Region          60..333
                     /region_name="GPI_EPT_2"
                     /note="GPI ethanolamine phosphate transferase 2; PIG-G;
                     cd16024"
                     /db_xref="CDD:293748"
     Site            order(72..73,113,217,266..267)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293748"
     Site            order(72,113,217,267)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293748"
     CDS             1..857
                     /gene="LOC133065912"
                     /coded_by="XM_061156390.1:142..2715"
                     /db_xref="GeneID:133065912"
ORIGIN      
        1 mrlgsgtfaa gcvvievlgv alflrgffpt pvfsgaerqa espapepsag assnwtelpp
       61 plfskvviml idalrddfvf gskgvkfmpy ttylvekgss lsfvaeakpp tvtmprikal
      121 ltgslpgfid vvrnlnsptl lednvitrak aagkriifyg detwvklfpk hfveydgtts
      181 ffvsdytevd nnvtrhldkv lkrqdwdvli lhylgldhig hisgpnspli ghklsemdsi
      241 lmkihtslls eerdtllpsl lvlcgdhgms eagghgassm eevntalvli ssaferkpgd
      301 vrhpthvqqt dlaatlsigl glpipksnig slmfpvlegr pmreqlrllh lntvqlskll
      361 qenvpsyeke pgfeqfkvse rshgnwirly leennsevlf nlgarvrrqy ldalrtlrls
      421 lskraaqydi ysmaagtimv levlalllls vpqalgsrae ldvpllspvc sllfclllla
      481 laalhvavct aadsscylcs lpwpaaggvm altaallcav vsaltrtfag gkclsqnppq
      541 stsrwseldl lsflgtvghv lslgassfie eehqtwyfli ntlclalchq iyrncflgdd
      601 capqrcphmg eefdgvtval qgkragregw elsrapadps slealrgpew wmvlaspwlv
      661 laccrllrpl nqtgvqwahr pdlghwlass dhkaelsvla vlslamifvl vqkrcsltsk
      721 vamafgllgi ycyraaignv lfpwkqdnkd vskgitearf vyvfvlgilf tgtkdllksq
      781 iiaadftart vglweiysgl vllaalllrp hnlpvlvlsl aiqtimtqfi wrplrhnite
      841 vtvmhywfgq affyfqd
//
LOCUS       XP_061012374             856 aa            linear   MAM 02-DEC-2023
DEFINITION  GPI ethanolamine phosphate transferase 2-like isoform X5 [Dama
            dama].
ACCESSION   XP_061012374
VERSION     XP_061012374.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156391.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..856
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..856
                     /product="GPI ethanolamine phosphate transferase 2-like
                     isoform X5"
                     /calculated_mol_wt=94320
     Region          60..333
                     /region_name="GPI_EPT_2"
                     /note="GPI ethanolamine phosphate transferase 2; PIG-G;
                     cd16024"
                     /db_xref="CDD:293748"
     Site            order(72..73,113,217,266..267)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293748"
     Site            order(72,113,217,267)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293748"
     CDS             1..856
                     /gene="LOC133065912"
                     /coded_by="XM_061156391.1:142..2712"
                     /db_xref="GeneID:133065912"
ORIGIN      
        1 mrlgsgtfaa gcvvievlgv alflrgffpt pvfsgaerqa espapepsag assnwtelpp
       61 plfskvviml idalrddfvf gskgvkfmpy ttylvekgss lsfvaeakpp tvtmprikal
      121 ltgslpgfid vvrnlnsptl lednvitrak aagkriifyg detwvklfpk hfveydgtts
      181 ffvsdytevd nnvtrhldkv lkrqdwdvli lhylgldhig hisgpnspli ghklsemdsi
      241 lmkihtslls eerdtllpsl lvlcgdhgms eagghgassm eevntalvli ssaferkpgd
      301 vrhpthvqqt dlaatlsigl glpipksnig slmfpvlegr pmreqlrllh lntvqlskll
      361 qenvpsyeke pgfeqfkvse rshgnwirly leennsevlf nlgarvrrqy ldalrtlrls
      421 lskraaqydi ysmaagtimv levlalllls vpqalgsrae ldvpllspvc sllfclllla
      481 laalhvavct aadsscylcs lpwpaaggvm altaallcav vsaltrtfag gkclsqnppq
      541 stsrwseldl lsflgtvghv lslgassfie eehqtwyfli ntlclalchq iyrncflgdd
      601 capqrcphmg eefdgvtval qgkragregw elsrapadps slealrgpew wmvlaspwlv
      661 laccrllrpl nqtgvqwahr pdlghwlass dhkaelsvla vlslamifvl vqkrcsltsk
      721 vamafgllgi ycyraaignv lfpwkqdnkd vskgitearf vyvfvlgilf tgtkdllksq
      781 iiaadftart vglweiysgl vllaalllrp hnlpvlvlsl aiqtimtqfi wrplrhnite
      841 vtvmhywfgq affyfq
//
LOCUS       XP_061012375             818 aa            linear   MAM 02-DEC-2023
DEFINITION  GPI ethanolamine phosphate transferase 2-like isoform X6 [Dama
            dama].
ACCESSION   XP_061012375
VERSION     XP_061012375.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156392.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..818
                     /product="GPI ethanolamine phosphate transferase 2-like
                     isoform X6"
                     /calculated_mol_wt=90761
     Region          1..265
                     /region_name="GPI_EPT_2"
                     /note="GPI ethanolamine phosphate transferase 2; PIG-G;
                     cd16024"
                     /db_xref="CDD:293748"
     Site            order(4..5,45,149,198..199)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293748"
     Site            order(4,45,149,199)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293748"
     CDS             1..818
                     /gene="LOC133065912"
                     /coded_by="XM_061156392.1:233..2689"
                     /db_xref="GeneID:133065912"
ORIGIN      
        1 mlidalrddf vfgskgvkfm pyttylvekg sslsfvaeak pptvtmprik alltgslpgf
       61 idvvrnlnsp tllednvitr akaagkriif ygdetwvklf pkhfveydgt tsffvsdyte
      121 vdnnvtrhld kvlkrqdwdv lilhylgldh ighisgpnsp lighklsemd silmkihtsl
      181 lseerdtllp sllvlcgdhg mseagghgas smeevntalv lissaferkp gdvrhpthvq
      241 qtdlaatlsi glglpipksn igslmfpvle grpmreqlrl lhlntvqlsk llqenvpsye
      301 kepgfeqfkv sershgnwir lyleennsev lfnlgarvrr qyldalrtlr lslskraaqy
      361 diysmaagti mvlevlalll lsvpqalgsr aeldvpllsp vcsllfclll lalaalhvav
      421 ctaadsscyl cslpwpaagg vmaltaallc avvsaltrtf aggkclsqnp pqstsrwsel
      481 dllsflgtvg hvlslgassf ieeehqtwyf lintlclalc hqiyrncflg ddcapqrcph
      541 mgeefdgvtv alqgkragre gwelsrapad psslealrgp ewwmvlaspw lvlaccrllr
      601 plnqtgvqwa hrpdlghwla ssdhkaelsv lavlslamif vlvqkrcslt skvamafgll
      661 giycyraaig nvlfpwkqdn kdvskgitea rfvyvfvlgi lftgtkdllk sqiiaadfta
      721 rtvglweiys glvllaalll rphnlpvlvl slaiqtimtq fiwrplrhni tevtvmhywf
      781 gqaffyfqge ehehrelesh mlitpsrekk dfslpaae
//
LOCUS       XP_061012376             818 aa            linear   MAM 02-DEC-2023
DEFINITION  GPI ethanolamine phosphate transferase 2-like isoform X6 [Dama
            dama].
ACCESSION   XP_061012376
VERSION     XP_061012376.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156393.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..818
                     /product="GPI ethanolamine phosphate transferase 2-like
                     isoform X6"
                     /calculated_mol_wt=90761
     Region          1..265
                     /region_name="GPI_EPT_2"
                     /note="GPI ethanolamine phosphate transferase 2; PIG-G;
                     cd16024"
                     /db_xref="CDD:293748"
     Site            order(4..5,45,149,198..199)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293748"
     Site            order(4,45,149,199)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293748"
     CDS             1..818
                     /gene="LOC133065912"
                     /coded_by="XM_061156393.1:185..2641"
                     /db_xref="GeneID:133065912"
ORIGIN      
        1 mlidalrddf vfgskgvkfm pyttylvekg sslsfvaeak pptvtmprik alltgslpgf
       61 idvvrnlnsp tllednvitr akaagkriif ygdetwvklf pkhfveydgt tsffvsdyte
      121 vdnnvtrhld kvlkrqdwdv lilhylgldh ighisgpnsp lighklsemd silmkihtsl
      181 lseerdtllp sllvlcgdhg mseagghgas smeevntalv lissaferkp gdvrhpthvq
      241 qtdlaatlsi glglpipksn igslmfpvle grpmreqlrl lhlntvqlsk llqenvpsye
      301 kepgfeqfkv sershgnwir lyleennsev lfnlgarvrr qyldalrtlr lslskraaqy
      361 diysmaagti mvlevlalll lsvpqalgsr aeldvpllsp vcsllfclll lalaalhvav
      421 ctaadsscyl cslpwpaagg vmaltaallc avvsaltrtf aggkclsqnp pqstsrwsel
      481 dllsflgtvg hvlslgassf ieeehqtwyf lintlclalc hqiyrncflg ddcapqrcph
      541 mgeefdgvtv alqgkragre gwelsrapad psslealrgp ewwmvlaspw lvlaccrllr
      601 plnqtgvqwa hrpdlghwla ssdhkaelsv lavlslamif vlvqkrcslt skvamafgll
      661 giycyraaig nvlfpwkqdn kdvskgitea rfvyvfvlgi lftgtkdllk sqiiaadfta
      721 rtvglweiys glvllaalll rphnlpvlvl slaiqtimtq fiwrplrhni tevtvmhywf
      781 gqaffyfqge ehehrelesh mlitpsrekk dfslpaae
//
LOCUS       XP_061012377             817 aa            linear   MAM 02-DEC-2023
DEFINITION  GPI ethanolamine phosphate transferase 2-like isoform X7 [Dama
            dama].
ACCESSION   XP_061012377
VERSION     XP_061012377.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156394.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..817
                     /product="GPI ethanolamine phosphate transferase 2-like
                     isoform X7"
                     /calculated_mol_wt=89819
     Region          60..333
                     /region_name="GPI_EPT_2"
                     /note="GPI ethanolamine phosphate transferase 2; PIG-G;
                     cd16024"
                     /db_xref="CDD:293748"
     Site            order(72..73,113,217,266..267)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293748"
     Site            order(72,113,217,267)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293748"
     CDS             1..817
                     /gene="LOC133065912"
                     /coded_by="XM_061156394.1:142..2595"
                     /db_xref="GeneID:133065912"
ORIGIN      
        1 mrlgsgtfaa gcvvievlgv alflrgffpt pvfsgaerqa espapepsag assnwtelpp
       61 plfskvviml idalrddfvf gskgvkfmpy ttylvekgss lsfvaeakpp tvtmprikal
      121 ltgslpgfid vvrnlnsptl lednvitrak aagkriifyg detwvklfpk hfveydgtts
      181 ffvsdytevd nnvtrhldkv lkrqdwdvli lhylgldhig hisgpnspli ghklsemdsi
      241 lmkihtslls eerdtllpsl lvlcgdhgms eagghgassm eevntalvli ssaferkpgd
      301 vrhpthvqqt dlaatlsigl glpipksnig slmfpvlegr pmreqlrllh lntvqlskll
      361 qenvpsyeke pgfeqfkvse rshgnwirly leennsevlf nlgarvrrqy ldalrtlrls
      421 lskraaqydi ysmaagtimv levlalllls vpqalgsrae ldvpllspvc sllfclllla
      481 laalhvavct aadsscylcs lpwpaaggvm altaallcav vsaltrtfag gkclsqnppq
      541 stsrwseldl lsflgtvghv lslgassfie eehqtwyfli ntlclalchq iyrncflgdd
      601 capqrcphmg eefdgvtval qgkragregw elsrapadps slealrgpew wmvlaspwlv
      661 laccrllrpl nqtgvqwahr pdlghwlass dhkaelsvla vlslamifvl vqkrcsltsk
      721 vamafgllgi ycyraaignv lfpwkqdnkd vsnitrikiw itslpfmedn rallrlvlfm
      781 slslafcsra pktclnlksl lqtsrpglwa fgrytvv
//
LOCUS       XP_061012378             816 aa            linear   MAM 02-DEC-2023
DEFINITION  GPI ethanolamine phosphate transferase 2-like isoform X8 [Dama
            dama].
ACCESSION   XP_061012378
VERSION     XP_061012378.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156395.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..816
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..816
                     /product="GPI ethanolamine phosphate transferase 2-like
                     isoform X8"
                     /calculated_mol_wt=89938
     Region          60..263
                     /region_name="ALP_like"
                     /note="alkaline phosphatases and sulfatases; cl23718"
                     /db_xref="CDD:474031"
     Site            order(72,113,147,196..197)
                     /site_type="active"
                     /db_xref="CDD:293732"
     Site            order(72,113,147,197)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:293732"
     CDS             1..816
                     /gene="LOC133065912"
                     /coded_by="XM_061156395.1:142..2592"
                     /db_xref="GeneID:133065912"
ORIGIN      
        1 mrlgsgtfaa gcvvievlgv alflrgffpt pvfsgaerqa espapepsag assnwtelpp
       61 plfskvviml idalrddfvf gskgvkfmpy ttylvekgss lsfvaeakpp tvtmprikvd
      121 nnvtrhldkv lkrqdwdvli lhylgldhig hisgpnspli ghklsemdsi lmkihtslls
      181 eerdtllpsl lvlcgdhgms eagghgassm eevntalvli ssaferkpgd vrhpthvqqt
      241 dlaatlsigl glpipksnig slmfpvlegr pmreqlrllh lntvqlskll qenvpsyeke
      301 pgfeqfkvse rshgnwirly leennsevlf nlgarvrrqy ldalrtlrls lskraaqydi
      361 ysmaagtimv levlalllls vpqalgsrae ldvpllspvc sllfclllla laalhvavct
      421 aadsscylcs lpwpaaggvm altaallcav vsaltrtfag gkclsqnppq stsrwseldl
      481 lsflgtvghv lslgassfie eehqtwyfli ntlclalchq iyrncflgdd capqrcphmg
      541 eefdgvtval qgkragregw elsrapadps slealrgpew wmvlaspwlv laccrllrpl
      601 nqtgvqwahr pdlghwlass dhkaelsvla vlslamifvl vqkrcsltsk vamafgllgi
      661 ycyraaignv lfpwkqdnkd vskgitearf vyvfvlgilf tgtkdllksq iiaadftart
      721 vglweiysgl vllaalllrp hnlpvlvlsl aiqtimtqfi wrplrhnite vtvmhywfgq
      781 affyfqgeeh ehreleshml itpsrekkdf slpaae
//
LOCUS       XP_061012379             777 aa            linear   MAM 02-DEC-2023
DEFINITION  GPI ethanolamine phosphate transferase 2-like isoform X9 [Dama
            dama].
ACCESSION   XP_061012379
VERSION     XP_061012379.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156396.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..777
                     /product="GPI ethanolamine phosphate transferase 2-like
                     isoform X9"
                     /calculated_mol_wt=85287
     Region          60..333
                     /region_name="GPI_EPT_2"
                     /note="GPI ethanolamine phosphate transferase 2; PIG-G;
                     cd16024"
                     /db_xref="CDD:293748"
     Site            order(72..73,113,217,266..267)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293748"
     Site            order(72,113,217,267)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293748"
     CDS             1..777
                     /gene="LOC133065912"
                     /coded_by="XM_061156396.1:142..2475"
                     /db_xref="GeneID:133065912"
ORIGIN      
        1 mrlgsgtfaa gcvvievlgv alflrgffpt pvfsgaerqa espapepsag assnwtelpp
       61 plfskvviml idalrddfvf gskgvkfmpy ttylvekgss lsfvaeakpp tvtmprikal
      121 ltgslpgfid vvrnlnsptl lednvitrak aagkriifyg detwvklfpk hfveydgtts
      181 ffvsdytevd nnvtrhldkv lkrqdwdvli lhylgldhig hisgpnspli ghklsemdsi
      241 lmkihtslls eerdtllpsl lvlcgdhgms eagghgassm eevntalvli ssaferkpgd
      301 vrhpthvqqt dlaatlsigl glpipksnig slmfpvlegr pmreqlrllh lntvqlskll
      361 qenvpsyeke pgfeqfkvse rshgnwirly leennsevlf nlgarvrrqy ldalrtlrls
      421 lskraaqydi ysmaagtimv levlalllls vpqalgsrae ldvpllspvc sllfclllla
      481 laalhvavct aadsscylcs lpwpaaggvm altaallcav vsaltrtfag gkclsqnppq
      541 stsrwseldl lsflgtvghv lslgassfie eehqtwyfli ntlclalchq iyrncflgdd
      601 capqrcphmg eefdgvtval qgkragregw elsrapadps slealrgpew wmvlaspwlv
      661 laccrllrpl nqtgvqwahr pdlghwlass dhkaelsvla vlslamifvl vqkrcsltsk
      721 vamafgllgi ycyraaignv lfpwkqdnkd vsnitrikiw itslpfmedn smylvgv
//
LOCUS       XP_061012380             773 aa            linear   MAM 02-DEC-2023
DEFINITION  GPI ethanolamine phosphate transferase 2-like isoform X10 [Dama
            dama].
ACCESSION   XP_061012380
VERSION     XP_061012380.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156397.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..773
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..773
                     /product="GPI ethanolamine phosphate transferase 2-like
                     isoform X10"
                     /calculated_mol_wt=84981
     Region          60..333
                     /region_name="GPI_EPT_2"
                     /note="GPI ethanolamine phosphate transferase 2; PIG-G;
                     cd16024"
                     /db_xref="CDD:293748"
     Site            order(72..73,113,217,266..267)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293748"
     Site            order(72,113,217,267)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293748"
     CDS             1..773
                     /gene="LOC133065912"
                     /coded_by="XM_061156397.1:142..2463"
                     /db_xref="GeneID:133065912"
ORIGIN      
        1 mrlgsgtfaa gcvvievlgv alflrgffpt pvfsgaerqa espapepsag assnwtelpp
       61 plfskvviml idalrddfvf gskgvkfmpy ttylvekgss lsfvaeakpp tvtmprikal
      121 ltgslpgfid vvrnlnsptl lednvitrak aagkriifyg detwvklfpk hfveydgtts
      181 ffvsdytevd nnvtrhldkv lkrqdwdvli lhylgldhig hisgpnspli ghklsemdsi
      241 lmkihtslls eerdtllpsl lvlcgdhgms eagghgassm eevntalvli ssaferkpgd
      301 vrhpthvqqt dlaatlsigl glpipksnig slmfpvlegr pmreqlrllh lntvqlskll
      361 qenvpsyeke pgfeqfkvse rshgnwirly leennsevlf nlgarvrrqy ldalrtlrls
      421 lskraaqydi ysmaagtimv levlalllls vpqalgsrae ldvpllspvc sllfclllla
      481 laalhvavct aadsscylcs lpwpaaggvm altaallcav vsaltrtfag gkclsqnppq
      541 stsrwseldl lsflgtvghv lslgassfie eehqtcsdhk aelsvlavls lamifvlvqk
      601 rcsltskvam afgllgiycy raaignvlfp wkqdnkdvsk gitearfvyv fvlgilftgt
      661 kdllksqiia adftartvgl weiysglvll aalllrphnl pvlvlslaiq timtqfiwrp
      721 lrhnitevtv mhywfgqaff yfqgeehehr eleshmlitp srekkdfslp aae
//
LOCUS       XP_061012381             767 aa            linear   MAM 02-DEC-2023
DEFINITION  GPI ethanolamine phosphate transferase 2-like isoform X11 [Dama
            dama].
ACCESSION   XP_061012381
VERSION     XP_061012381.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156398.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..767
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..767
                     /product="GPI ethanolamine phosphate transferase 2-like
                     isoform X11"
                     /calculated_mol_wt=84198
     Region          60..333
                     /region_name="GPI_EPT_2"
                     /note="GPI ethanolamine phosphate transferase 2; PIG-G;
                     cd16024"
                     /db_xref="CDD:293748"
     Site            order(72..73,113,217,266..267)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293748"
     Site            order(72,113,217,267)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293748"
     CDS             1..767
                     /gene="LOC133065912"
                     /coded_by="XM_061156398.1:142..2445"
                     /db_xref="GeneID:133065912"
ORIGIN      
        1 mrlgsgtfaa gcvvievlgv alflrgffpt pvfsgaerqa espapepsag assnwtelpp
       61 plfskvviml idalrddfvf gskgvkfmpy ttylvekgss lsfvaeakpp tvtmprikal
      121 ltgslpgfid vvrnlnsptl lednvitrak aagkriifyg detwvklfpk hfveydgtts
      181 ffvsdytevd nnvtrhldkv lkrqdwdvli lhylgldhig hisgpnspli ghklsemdsi
      241 lmkihtslls eerdtllpsl lvlcgdhgms eagghgassm eevntalvli ssaferkpgd
      301 vrhpthvqqt dlaatlsigl glpipksnig slmfpvlegr pmreqlrllh lntvqlskll
      361 qenvpsyeke pgfeqfkvse rshgnwirly leennsevlf nlgarvrrqy ldalrtlrls
      421 lskraaqydi ysmaagtimv levlalllls vpqalgsrae ldvpllspvc sllfclllla
      481 laalhvavct aadsscylcs lpwpaaggvm altaallcav vsaltrtfag gkclsqnppq
      541 stsrwseldl lsflgtvghv lslgassfie eehqtwyfli ntlclalchq iyrncflgdd
      601 capqrcphmg eefdgvtval qgkragregw elsrapadps slealrgpew wmvlaspwlv
      661 laccrllrpl nqtgvqwahr pdlghwlass dhkaelsvla vlslamifvl vqkrcsltsk
      721 vamafgllgi ycyraaignv lfpwkqdnkd vsnlesfyff flsdcyg
//
LOCUS       XP_061012385             767 aa            linear   MAM 02-DEC-2023
DEFINITION  GPI ethanolamine phosphate transferase 2-like isoform X11 [Dama
            dama].
ACCESSION   XP_061012385
VERSION     XP_061012385.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156402.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..767
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..767
                     /product="GPI ethanolamine phosphate transferase 2-like
                     isoform X11"
                     /calculated_mol_wt=84198
     Region          60..333
                     /region_name="GPI_EPT_2"
                     /note="GPI ethanolamine phosphate transferase 2; PIG-G;
                     cd16024"
                     /db_xref="CDD:293748"
     Site            order(72..73,113,217,266..267)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293748"
     Site            order(72,113,217,267)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293748"
     CDS             1..767
                     /gene="LOC133065912"
                     /coded_by="XM_061156402.1:142..2445"
                     /db_xref="GeneID:133065912"
ORIGIN      
        1 mrlgsgtfaa gcvvievlgv alflrgffpt pvfsgaerqa espapepsag assnwtelpp
       61 plfskvviml idalrddfvf gskgvkfmpy ttylvekgss lsfvaeakpp tvtmprikal
      121 ltgslpgfid vvrnlnsptl lednvitrak aagkriifyg detwvklfpk hfveydgtts
      181 ffvsdytevd nnvtrhldkv lkrqdwdvli lhylgldhig hisgpnspli ghklsemdsi
      241 lmkihtslls eerdtllpsl lvlcgdhgms eagghgassm eevntalvli ssaferkpgd
      301 vrhpthvqqt dlaatlsigl glpipksnig slmfpvlegr pmreqlrllh lntvqlskll
      361 qenvpsyeke pgfeqfkvse rshgnwirly leennsevlf nlgarvrrqy ldalrtlrls
      421 lskraaqydi ysmaagtimv levlalllls vpqalgsrae ldvpllspvc sllfclllla
      481 laalhvavct aadsscylcs lpwpaaggvm altaallcav vsaltrtfag gkclsqnppq
      541 stsrwseldl lsflgtvghv lslgassfie eehqtwyfli ntlclalchq iyrncflgdd
      601 capqrcphmg eefdgvtval qgkragregw elsrapadps slealrgpew wmvlaspwlv
      661 laccrllrpl nqtgvqwahr pdlghwlass dhkaelsvla vlslamifvl vqkrcsltsk
      721 vamafgllgi ycyraaignv lfpwkqdnkd vsnlesfyff flsdcyg
//
LOCUS       XP_061012386             767 aa            linear   MAM 02-DEC-2023
DEFINITION  GPI ethanolamine phosphate transferase 2-like isoform X11 [Dama
            dama].
ACCESSION   XP_061012386
VERSION     XP_061012386.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156403.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..767
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..767
                     /product="GPI ethanolamine phosphate transferase 2-like
                     isoform X11"
                     /calculated_mol_wt=84198
     Region          60..333
                     /region_name="GPI_EPT_2"
                     /note="GPI ethanolamine phosphate transferase 2; PIG-G;
                     cd16024"
                     /db_xref="CDD:293748"
     Site            order(72..73,113,217,266..267)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293748"
     Site            order(72,113,217,267)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293748"
     CDS             1..767
                     /gene="LOC133065912"
                     /coded_by="XM_061156403.1:142..2445"
                     /db_xref="GeneID:133065912"
ORIGIN      
        1 mrlgsgtfaa gcvvievlgv alflrgffpt pvfsgaerqa espapepsag assnwtelpp
       61 plfskvviml idalrddfvf gskgvkfmpy ttylvekgss lsfvaeakpp tvtmprikal
      121 ltgslpgfid vvrnlnsptl lednvitrak aagkriifyg detwvklfpk hfveydgtts
      181 ffvsdytevd nnvtrhldkv lkrqdwdvli lhylgldhig hisgpnspli ghklsemdsi
      241 lmkihtslls eerdtllpsl lvlcgdhgms eagghgassm eevntalvli ssaferkpgd
      301 vrhpthvqqt dlaatlsigl glpipksnig slmfpvlegr pmreqlrllh lntvqlskll
      361 qenvpsyeke pgfeqfkvse rshgnwirly leennsevlf nlgarvrrqy ldalrtlrls
      421 lskraaqydi ysmaagtimv levlalllls vpqalgsrae ldvpllspvc sllfclllla
      481 laalhvavct aadsscylcs lpwpaaggvm altaallcav vsaltrtfag gkclsqnppq
      541 stsrwseldl lsflgtvghv lslgassfie eehqtwyfli ntlclalchq iyrncflgdd
      601 capqrcphmg eefdgvtval qgkragregw elsrapadps slealrgpew wmvlaspwlv
      661 laccrllrpl nqtgvqwahr pdlghwlass dhkaelsvla vlslamifvl vqkrcsltsk
      721 vamafgllgi ycyraaignv lfpwkqdnkd vsnlesfyff flsdcyg
//
LOCUS       XP_061012387             118 aa            linear   MAM 02-DEC-2023
DEFINITION  beta-2-microglobulin [Dama dama].
ACCESSION   XP_061012387
VERSION     XP_061012387.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156404.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..118
                     /product="beta-2-microglobulin"
                     /calculated_mol_wt=13471
     Region          23..115
                     /region_name="IgC1_beta2m"
                     /note="Class I major histocompatibility complex (MHC)
                     beta-2-microglobulin; member of the C1-set of Ig
                     superfamily (IgSF) domains; cd05770"
                     /db_xref="CDD:409427"
     Region          24..31
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409427"
     Site            order(28,30..32,44,46,48,72..75,79,81..82)
                     /site_type="other"
                     /note="MHC classI alpha interface [polypeptide binding]"
                     /db_xref="CDD:409427"
     Site            order(28,32..34,41,46,53..54,72..76,78..79,82)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:409427"
     Region          41..48
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409427"
     Region          54..60
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409427"
     Region          63..65
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409427"
     Region          69..76
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409427"
     Region          81..89
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409427"
     Region          96..103
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409427"
     Region          110..114
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409427"
     CDS             1..118
                     /gene="LOC133065916"
                     /coded_by="XM_061156404.1:92..448"
                     /db_xref="GeneID:133065916"
ORIGIN      
        1 marfaslvll gllslsglda vqrspkvqvy srhppedgkp nylncyvsgf hppqieiell
       61 kngekmkseq sdlsfskdws fyllshaeft pnskdqyscr vkhitfsepq tyvwdrdm
//
LOCUS       XP_061012388             118 aa            linear   MAM 02-DEC-2023
DEFINITION  beta-2-microglobulin [Dama dama].
ACCESSION   XP_061012388
VERSION     XP_061012388.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156405.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..118
                     /product="beta-2-microglobulin"
                     /calculated_mol_wt=13471
     Region          23..115
                     /region_name="IgC1_beta2m"
                     /note="Class I major histocompatibility complex (MHC)
                     beta-2-microglobulin; member of the C1-set of Ig
                     superfamily (IgSF) domains; cd05770"
                     /db_xref="CDD:409427"
     Region          24..31
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409427"
     Site            order(28,30..32,44,46,48,72..75,79,81..82)
                     /site_type="other"
                     /note="MHC classI alpha interface [polypeptide binding]"
                     /db_xref="CDD:409427"
     Site            order(28,32..34,41,46,53..54,72..76,78..79,82)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:409427"
     Region          41..48
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409427"
     Region          54..60
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409427"
     Region          63..65
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409427"
     Region          69..76
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409427"
     Region          81..89
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409427"
     Region          96..103
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409427"
     Region          110..114
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409427"
     CDS             1..118
                     /gene="LOC133065917"
                     /coded_by="XM_061156405.1:92..448"
                     /db_xref="GeneID:133065917"
ORIGIN      
        1 marfaslvll gllslsglda vqrspkvqvy srhppedgkp nylncyvsgf hppqieiell
       61 kngekmkseq sdlsfskdws fyllshaeft pnskdqyscr vkhitfsepq tyvwdrdm
//
LOCUS       XP_061012389             357 aa            linear   MAM 02-DEC-2023
DEFINITION  protein PAT1 homolog 2 [Dama dama].
ACCESSION   XP_061012389
VERSION     XP_061012389.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156406.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..357
                     /product="protein PAT1 homolog 2"
                     /calculated_mol_wt=40322
     Region          <74..>208
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     CDS             1..357
                     /gene="PATL2"
                     /coded_by="XM_061156406.1:364..1437"
                     /db_xref="GeneID:133065918"
ORIGIN      
        1 mtqkekdwvv kvqmvqlqse nprlddyyyq eyyqklekkq adeellgrrs rfeslklvtp
       61 yiqkagvyes vvriegslgq vavstcftpr raidavphgt qeqetaaass qrlwvlyrie
      121 kmflqlleie dgqqdgpaqp rdseqqssrv eklfqalkaq gqnnleaadd gflqalsvgk
      181 gkalvarllp flrreqavsl llaitrhlpf lvkrdvadqa lqmlfqplsk cirhltfsel
      241 lqglqglmrl ppgsserpit vvlqnqfgis llyallshge qlvslnssik epssdhsawt
      301 dmviltawei aqmptaslae plafpsnllp lfchhvdkes vqklearmey vtmeirs
//
LOCUS       XP_061012390            2441 aa            linear   MAM 02-DEC-2023
DEFINITION  spatacsin isoform X1 [Dama dama].
ACCESSION   XP_061012390
VERSION     XP_061012390.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156407.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2441
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2441
                     /product="spatacsin isoform X1"
                     /calculated_mol_wt=276837
     Region          2094..2386
                     /region_name="Spatacsin_C"
                     /note="Spatacsin C-terminus; pfam14649"
                     /db_xref="CDD:464236"
     CDS             1..2441
                     /gene="SPG11"
                     /coded_by="XM_061156407.1:33..7358"
                     /db_xref="GeneID:133065920"
ORIGIN      
        1 maaeervlpv llvpvpaeaa grlgfraqlh rdqpvlgslt aagslhvlpl apggrgggdc
       61 rlegcfrqfv wedsrhsgtp ndkprllals enyelliyef nledgrcdat vlysyseetl
      121 qklvedqnis ifllslrils fhdntsllfi nkcvvlhvmf perdtairvl scftlplpaq
      181 avdriidtql ckgilfvlss lgwiyifdiv dgrqiahvdl alpqedmcne qqqepaksss
      241 ftslkvsqdl dvvvvvgvsn tavalnlnly frqypghllc ektlqditie gpqgideddp
      301 vnsdynmklt kfsfridrsw kaqlsslnet iksselegsc capwyqdvsh pespesgngs
      361 asvsdwafip qdvtcspcdf pqkgpartsd pgrvwkmmhi reqeeslela cvsvtgftal
      421 ftwagertgw tivlwdletq smqcfllgkk cvpvdsggdr qpclvltesg lslilfgltq
      481 eeflnrlmih gsastvdslc hlngwgrcsi pihaleagie nrqldtvdff lkskenlltp
      541 sskssvsdqf dhfashlylk hveeltpald llcsairend setqskhfse qllnltlsfl
      601 nkqikelfih ieeldehlqk gvdiltsyid elrtfmikfp wkltdaidey dinenvpkvk
      661 esniweklsi eevianailn nkipeaqtff rinshsaqrl eelirigldl vfdnlkknni
      721 qeasellknm gfnvkdqllk icfyttdksi rdflveifke knyfsekekr tvdfvhqvek
      781 fysghlqenm qiqslprywi keqdfskhks vldpflkydh kdklnkqdhr ivlnwaqwwn
      841 qptqesillp rinpegyssy spealwrylt arhdwpsiil wigefqtqss hasleqnkwp
      901 pltvdvvdqn tccntymrne ildklarngi fltseledfe lflarlnrvg gvmqdalavq
      961 nyrskegwdf hshfilycle hslqyllyvy ldhyklsppn cpflgkkelh eahpwfeflv
     1021 qcrqvasnlt dpklifqasl anaqilipss qagvssmlle ghtllalaat mfapggvsqv
     1081 vqngenensl kkvdpqllkm altsypklka alfpqytaps ilppditlyh liqsllpfdp
     1141 srlfgwqsan tlaigdaasq lphfsspdlv nkyavverln fayylhhgrp sfafgtflvq
     1201 eltksktpkq liqkagseay vlglscfhtp sigaacvcfl ellgldslkl rvdmkvanii
     1261 lnykcgneda qynsiresla eklsklavge ratieellvl leegiwnnlq qqeiesptst
     1321 pnyrlssess sqwalvvqfc rlhnmkpsts ylrecarand wlqfiihsql hshhpeevky
     1381 llqyfspvlq dhlrlafenl psvsnsrmds dqvcnmysqe lqrhkeemtd ffqillqcse
     1441 vpnswcwllg eavkqkapil svlasclqsf lrwqdasavs clcvwivasv epcvaaeavg
     1501 plqdpveghi wgledlsviw rtllmrqkir tlirgfqlff kdsplllmme myelcmffkn
     1561 ykeaeaklve fqqsletlet aatrvpaaip apwlkehvcf llklmlqqcs tqyelgrllq
     1621 lfvgiehlfs dgpdvkklcv lsqilkdtsi ainraiitsy slenfqhecr svlekletdg
     1681 hfalarrvae laelpvddlv ieeitqemqt lkhidqwslk qaridfwkkc henfkknsis
     1741 sraaasffsa qalwagerpa aggpssaeer hlvlslaghw laredpvple eledlekqiw
     1801 lcrvaqhtlg gsqeegeprg pqqlsaggel sfdglasefs fsnlavlnts kyleldglps
     1861 rdicdnklnw keqaslncli grllddgrvh easracryfr fynqdvtlvl hcralasgea
     1921 gvddlhpeil allrsaelpe eeeqagiplr rvqsmssldg qsfvmpplmd evvtnletla
     1981 srclhgknyc rqvlclyela kelgcsyadv aaqdgeallr avlasqrpdr ckraqafist
     2041 qglgpdtvae lvaeevtrel ltpsegtghk qvftpaeesq tflqltalcq drtlvgvkll
     2101 ekissvphge lscttellil ahhcftltch megiirvlqa arlltdnhla pseeyglvvr
     2161 lltgigryne mtyifdllhk khyfevlmrk kldpsgtlkt alldyikrcr pgdsekhnmi
     2221 alcfsmcrei genheaaaci qlkliesqpw edslkdgqql kqlllkaltl mldaaesyak
     2281 dscvrqalhc hrltklitlq ihflntgrnt mlinlsrhrl pdciaalprf yqasivaeay
     2341 dfvpdwaeil yqqvilkgdf nyleefkqqr llrpsifeei sikckhhqpt dfvlknlkkl
     2401 ltycediyly yklayehkld vvnvllkdpq tgcclkdmla g
//
LOCUS       XP_061012391            2435 aa            linear   MAM 02-DEC-2023
DEFINITION  spatacsin isoform X2 [Dama dama].
ACCESSION   XP_061012391
VERSION     XP_061012391.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156408.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2435
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2435
                     /product="spatacsin isoform X2"
                     /calculated_mol_wt=276019
     Region          2088..2380
                     /region_name="Spatacsin_C"
                     /note="Spatacsin C-terminus; pfam14649"
                     /db_xref="CDD:464236"
     CDS             1..2435
                     /gene="SPG11"
                     /coded_by="XM_061156408.1:33..7340"
                     /db_xref="GeneID:133065920"
ORIGIN      
        1 maaeervlpv llvpvpaeaa grlgfraqlh rdqpvlgslt aagslhvlpl apggrgggdc
       61 rlegcfrqfv wedsrhsgtp ndkprllals enyelliyef nledgrcdat vlysyseetl
      121 qklvedqnis ifllslrils fhdntsllfi nkcvvlhvmf perdtairvl scftlplpaq
      181 avdriidtql ckgilfvlss lgwiyifdiv dgrqiahvdl alpqedmcne qqqepaksss
      241 ftslkvsqdl dvvvvvgvsn tavalnlnly frqypghllc ektlqditie gpqgideddp
      301 vnsdynmklt kfsfridrsw kaqlsslnet iksselegsc capwyqdvsh pespesgngs
      361 asvsdwafip qdvtcspcdf pqkgpartsd pgrvwkmmhi reqeeslela cvsvtgftal
      421 ftwagertgw tivlwdletq smqcfllgkk cvpvdsggdr qpclvltesg lslilfgltq
      481 eeflnrlmih gsastvdslc hlngwgrcsi pihaleagie nrqldtvdff lkskenlltp
      541 sskssvsdqf dhfashlylk hveeltpald llcsairend setqskhfse qllnltlsfl
      601 nkqikelfih ieeldehlqk gvdiltsyid elrtfmikfp wkltdaidey dinenvpkvk
      661 esniweklsi eevianailn nkipeaqtff rinshsaqrl eelirigldl vfdnlkknni
      721 qeasellknm gfnvkdqllk icfyttdksi rdflveifke knyfsekekr tvdfvhqvek
      781 fysghlqenm qiqslprywi keqdfskhks vldpflkydh kdklnkqdhr ivlnwaqwwn
      841 qptqesillp rinpegyssy spealwrylt arhdwpsiil wigefqtqss hasleqnkwp
      901 pltvdvvdqn tccntymrne ildklarngi fltseledfe lflarlnrvg gvmqdalavq
      961 nyrskegwdf hshfilycle hslqyllyvy ldhyklsppn cpflgkkelh eahpwfeflv
     1021 qcrqvasnlt dpklifqasl anaqilipss qagvssmlle ghtllalaat mfapggvsqv
     1081 vqngenensl kkvdpqllkm altsypklka alfpqytaps ilppditlyh liqsllpfdp
     1141 srlfgwqsan tlaigdaasq lphfsspdlv nkyavverln fayylhhgrp sfafgtflvq
     1201 eltksktpkq liqkagseay vlglscfhtp sigaacvcfl ellgldslkl rvdmkvanii
     1261 lnykcgneda qynsiresla eklsklavge ratieellvl leegiwnnlq qqeiesptst
     1321 pnyrlssess sqwalvvqfc rlhnmkpsts ylrecarand wlqfiihsql hshhpeevky
     1381 llqyfspvlq dhlrlafenl psvsnsrmds dqvcnmysqe lqrhkeemtd ffqillqcse
     1441 vpnswcwllg eavkqkapil svlasclqda savsclcvwi vasvepcvaa eavgplqdpv
     1501 eghiwgledl sviwrtllmr qkirtlirgf qlffkdspll lmmemyelcm ffknykeaea
     1561 klvefqqsle tletaatrvp aaipapwlke hvcfllklml qqcstqyelg rllqlfvgie
     1621 hlfsdgpdvk klcvlsqilk dtsiainrai itsyslenfq hecrsvlekl etdghfalar
     1681 rvaelaelpv ddlvieeitq emqtlkhidq wslkqaridf wkkchenfkk nsissraaas
     1741 ffsaqalwag erpaaggpss aeerhlvlsl aghwlaredp vpleeledle kqiwlcrvaq
     1801 htlggsqeeg eprgpqqlsa ggelsfdgla sefsfsnlav lntskyleld glpsrdicdn
     1861 klnwkeqasl ncligrlldd grvheasrac ryfrfynqdv tlvlhcrala sgeagvddlh
     1921 peilallrsa elpeeeeqag iplrrvqsms sldgqsfvmp plmdevvtnl etlasrclhg
     1981 knycrqvlcl yelakelgcs yadvaaqdge allravlasq rpdrckraqa fistqglgpd
     2041 tvaelvaeev trelltpseg tghkqvftpa eesqtflqlt alcqdrtlvg vkllekissv
     2101 phgelsctte llilahhcft ltchmegiir vlqaarlltd nhlapseeyg lvvrlltgig
     2161 rynemtyifd llhkkhyfev lmrkkldpsg tlktalldyi krcrpgdsek hnmialcfsm
     2221 creigenhea aaciqlklie sqpwedslkd gqqlkqlllk altlmldaae syakdscvrq
     2281 alhchrltkl itlqihflnt grntmlinls rhrlpdciaa lprfyqasiv aeaydfvpdw
     2341 aeilyqqvil kgdfnyleef kqqrllrpsi feeisikckh hqptdfvlkn lkklltyced
     2401 iylyyklaye hkldvvnvll kdpqtgcclk dmlag
//
LOCUS       XP_061012392            2433 aa            linear   MAM 02-DEC-2023
DEFINITION  spatacsin isoform X3 [Dama dama].
ACCESSION   XP_061012392
VERSION     XP_061012392.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156409.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2433
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2433
                     /product="spatacsin isoform X3"
                     /calculated_mol_wt=275989
     Region          2086..2378
                     /region_name="Spatacsin_C"
                     /note="Spatacsin C-terminus; pfam14649"
                     /db_xref="CDD:464236"
     CDS             1..2433
                     /gene="SPG11"
                     /coded_by="XM_061156409.1:33..7334"
                     /db_xref="GeneID:133065920"
ORIGIN      
        1 maaeervlpv llvpvpaeaa grlgfraqlh rdqpvlgslt aagslhvlpl apggrgggdc
       61 rlegcfrqfv wedsrhsgtp ndkprllals enyelliyef nledgrcdat vlysyseetl
      121 qklvedqnis ifllslrils fhdntsllfi nkcvvlhvmf perdtairvl scftlplpaq
      181 avdriidtql ckgilfvlss lgwiyifdiv dgrqiahvdl alpqedmcne qqqepaksss
      241 ftslkvsqdl dvvvvvgvsn tavalnlnly frqypghllc ektlqditie gpqgideddp
      301 vnsdynmklt kfsfridrsw kaqlsslnet iksselegsc capwyqdvsh pespesgngs
      361 asvsdwafip qdvtcspcdf pqkgpartsd pgrvwkmmhi reqeeslela cvsvtgftal
      421 ftwagertgw tivlwdletq smqcfllgkk cvpvdsggdr qpclvltesg lslilfgltq
      481 eeflnrlmih gsastvdslc hlngwgrcsi pihaleagie nrqldtvdff lkskenlltp
      541 sskssvsdqf dhfashlylk hveeltpald llcsairend setqskhfse qllnltlsfl
      601 nkqikelfih ieeldehlqk gvdiltsyid elrtfmikfp wkltdaidey dinenvpkvk
      661 esniweklsi eevianailn nkipeaqtff rinshsaqrl eelirigldl vfdnlkknni
      721 qeasellknm gfnvkdqllk icfyttdksi rdflveifke knyfsekekr tvdfvhqvek
      781 fysghlqenm qiqslprywi keqdfskhks vldpflkydh kdklnkqdhr ivlnwaqwwn
      841 qptqesillp rinpegyssy spealwrylt arhdwpsiil wigefqtqss hasleqnkwp
      901 pltvdvvdqn tccntymrne ildklarngi fltseledfe lflarlnrvg gvmqdalavq
      961 nyrskegwdf hshfilycle hslqyllyvy ldhyklsppn cpflgkkelh eahpwfeflv
     1021 qcrqvasnlt dpklifqasl anaqilipss qagvssmlle ghtllalaat mfapggvsqv
     1081 vqngenensl kkvdpqllkm altsypklka alfpqytaps ilppditlyh liqsllpfdp
     1141 srlfgwqsan tlaigdaasq lphfsspdlv nkyavverln fayylhhgrp sfafgtflvq
     1201 eltksktpkq liqkagseay vlglscfhtp sigaacvcfl ellgldslkl rvdmkvanii
     1261 lnykcgneda qynsiresla eklsklavge ratieellvl leegiwnnlq qqeierlsse
     1321 sssqwalvvq fcrlhnmkps tsylrecara ndwlqfiihs qlhshhpeev kyllqyfspv
     1381 lqdhlrlafe nlpsvsnsrm dsdqvcnmys qelqrhkeem tdffqillqc sevpnswcwl
     1441 lgeavkqkap ilsvlasclq sflrwqdasa vsclcvwiva svepcvaaea vgplqdpveg
     1501 hiwgledlsv iwrtllmrqk irtlirgfql ffkdsplllm memyelcmff knykeaeakl
     1561 vefqqsletl etaatrvpaa ipapwlkehv cfllklmlqq cstqyelgrl lqlfvgiehl
     1621 fsdgpdvkkl cvlsqilkdt siainraiit syslenfqhe crsvleklet dghfalarrv
     1681 aelaelpvdd lvieeitqem qtlkhidqws lkqaridfwk kchenfkkns issraaasff
     1741 saqalwager paaggpssae erhlvlslag hwlaredpvp leeledlekq iwlcrvaqht
     1801 lggsqeegep rgpqqlsagg elsfdglase fsfsnlavln tskyleldgl psrdicdnkl
     1861 nwkeqaslnc ligrllddgr vheasracry frfynqdvtl vlhcralasg eagvddlhpe
     1921 ilallrsael peeeeqagip lrrvqsmssl dgqsfvmppl mdevvtnlet lasrclhgkn
     1981 ycrqvlclye lakelgcsya dvaaqdgeal lravlasqrp drckraqafi stqglgpdtv
     2041 aelvaeevtr elltpsegtg hkqvftpaee sqtflqltal cqdrtlvgvk llekissvph
     2101 gelscttell ilahhcftlt chmegiirvl qaarlltdnh lapseeyglv vrlltgigry
     2161 nemtyifdll hkkhyfevlm rkkldpsgtl ktalldyikr crpgdsekhn mialcfsmcr
     2221 eigenheaaa ciqlkliesq pwedslkdgq qlkqlllkal tlmldaaesy akdscvrqal
     2281 hchrltklit lqihflntgr ntmlinlsrh rlpdciaalp rfyqasivae aydfvpdwae
     2341 ilyqqvilkg dfnyleefkq qrllrpsife eisikckhhq ptdfvlknlk klltycediy
     2401 lyyklayehk ldvvnvllkd pqtgcclkdm lag
//
LOCUS       XP_061012393            2427 aa            linear   MAM 02-DEC-2023
DEFINITION  spatacsin isoform X4 [Dama dama].
ACCESSION   XP_061012393
VERSION     XP_061012393.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156410.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2427
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2427
                     /product="spatacsin isoform X4"
                     /calculated_mol_wt=275171
     Region          2080..2372
                     /region_name="Spatacsin_C"
                     /note="Spatacsin C-terminus; pfam14649"
                     /db_xref="CDD:464236"
     CDS             1..2427
                     /gene="SPG11"
                     /coded_by="XM_061156410.1:33..7316"
                     /db_xref="GeneID:133065920"
ORIGIN      
        1 maaeervlpv llvpvpaeaa grlgfraqlh rdqpvlgslt aagslhvlpl apggrgggdc
       61 rlegcfrqfv wedsrhsgtp ndkprllals enyelliyef nledgrcdat vlysyseetl
      121 qklvedqnis ifllslrils fhdntsllfi nkcvvlhvmf perdtairvl scftlplpaq
      181 avdriidtql ckgilfvlss lgwiyifdiv dgrqiahvdl alpqedmcne qqqepaksss
      241 ftslkvsqdl dvvvvvgvsn tavalnlnly frqypghllc ektlqditie gpqgideddp
      301 vnsdynmklt kfsfridrsw kaqlsslnet iksselegsc capwyqdvsh pespesgngs
      361 asvsdwafip qdvtcspcdf pqkgpartsd pgrvwkmmhi reqeeslela cvsvtgftal
      421 ftwagertgw tivlwdletq smqcfllgkk cvpvdsggdr qpclvltesg lslilfgltq
      481 eeflnrlmih gsastvdslc hlngwgrcsi pihaleagie nrqldtvdff lkskenlltp
      541 sskssvsdqf dhfashlylk hveeltpald llcsairend setqskhfse qllnltlsfl
      601 nkqikelfih ieeldehlqk gvdiltsyid elrtfmikfp wkltdaidey dinenvpkvk
      661 esniweklsi eevianailn nkipeaqtff rinshsaqrl eelirigldl vfdnlkknni
      721 qeasellknm gfnvkdqllk icfyttdksi rdflveifke knyfsekekr tvdfvhqvek
      781 fysghlqenm qiqslprywi keqdfskhks vldpflkydh kdklnkqdhr ivlnwaqwwn
      841 qptqesillp rinpegyssy spealwrylt arhdwpsiil wigefqtqss hasleqnkwp
      901 pltvdvvdqn tccntymrne ildklarngi fltseledfe lflarlnrvg gvmqdalavq
      961 nyrskegwdf hshfilycle hslqyllyvy ldhyklsppn cpflgkkelh eahpwfeflv
     1021 qcrqvasnlt dpklifqasl anaqilipss qagvssmlle ghtllalaat mfapggvsqv
     1081 vqngenensl kkvdpqllkm altsypklka alfpqytaps ilppditlyh liqsllpfdp
     1141 srlfgwqsan tlaigdaasq lphfsspdlv nkyavverln fayylhhgrp sfafgtflvq
     1201 eltksktpkq liqkagseay vlglscfhtp sigaacvcfl ellgldslkl rvdmkvanii
     1261 lnykcgneda qynsiresla eklsklavge ratieellvl leegiwnnlq qqeierlsse
     1321 sssqwalvvq fcrlhnmkps tsylrecara ndwlqfiihs qlhshhpeev kyllqyfspv
     1381 lqdhlrlafe nlpsvsnsrm dsdqvcnmys qelqrhkeem tdffqillqc sevpnswcwl
     1441 lgeavkqkap ilsvlasclq dasavsclcv wivasvepcv aaeavgplqd pveghiwgle
     1501 dlsviwrtll mrqkirtlir gfqlffkdsp lllmmemyel cmffknykea eaklvefqqs
     1561 letletaatr vpaaipapwl kehvcfllkl mlqqcstqye lgrllqlfvg iehlfsdgpd
     1621 vkklcvlsqi lkdtsiainr aiitsyslen fqhecrsvle kletdghfal arrvaelael
     1681 pvddlvieei tqemqtlkhi dqwslkqari dfwkkchenf kknsissraa asffsaqalw
     1741 agerpaaggp ssaeerhlvl slaghwlare dpvpleeled lekqiwlcrv aqhtlggsqe
     1801 egeprgpqql saggelsfdg lasefsfsnl avlntskyle ldglpsrdic dnklnwkeqa
     1861 slncligrll ddgrvheasr acryfrfynq dvtlvlhcra lasgeagvdd lhpeilallr
     1921 saelpeeeeq agiplrrvqs mssldgqsfv mpplmdevvt nletlasrcl hgknycrqvl
     1981 clyelakelg csyadvaaqd geallravla sqrpdrckra qafistqglg pdtvaelvae
     2041 evtrelltps egtghkqvft paeesqtflq ltalcqdrtl vgvkllekis svphgelsct
     2101 tellilahhc ftltchmegi irvlqaarll tdnhlapsee yglvvrlltg igrynemtyi
     2161 fdllhkkhyf evlmrkkldp sgtlktalld yikrcrpgds ekhnmialcf smcreigenh
     2221 eaaaciqlkl iesqpwedsl kdgqqlkqll lkaltlmlda aesyakdscv rqalhchrlt
     2281 klitlqihfl ntgrntmlin lsrhrlpdci aalprfyqas ivaeaydfvp dwaeilyqqv
     2341 ilkgdfnyle efkqqrllrp sifeeisikc khhqptdfvl knlkklltyc ediylyykla
     2401 yehkldvvnv llkdpqtgcc lkdmlag
//
LOCUS       XP_061012395             262 aa            linear   MAM 02-DEC-2023
DEFINITION  eukaryotic translation initiation factor 3 subunit J [Dama dama].
ACCESSION   XP_061012395
VERSION     XP_061012395.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156412.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..262
                     /product="eukaryotic translation initiation factor 3
                     subunit J"
                     /calculated_mol_wt=29307
     Region          16..262
                     /region_name="eIF3_subunit"
                     /note="Translation initiation factor eIF3 subunit;
                     pfam08597"
                     /db_xref="CDD:462530"
     CDS             1..262
                     /gene="EIF3J"
                     /coded_by="XM_061156412.1:97..885"
                     /db_xref="GeneID:133065921"
ORIGIN      
        1 maaaaaaaaa aagdsdswda dtfsvedpvr kvggggtagg drwegedede dvkdnwdddd
       61 dekkeeaevk pevkisekkk iaekikeker qqkkrqeeik krleepeepk mltpeeqlad
      121 klrlkklqee sdlelaketf gvnntvygid amnpssrddf tefgkllkdk itqyekslyy
      181 anflealvrd vcisleiddl kkitnsltvl csekqkqekq skakkkkkgv vpggglkatm
      241 kddladyggy dggyvqdyed fm
//
LOCUS       XP_061012396             466 aa            linear   MAM 02-DEC-2023
DEFINITION  CTD small phosphatase-like protein 2 isoform X1 [Dama dama].
ACCESSION   XP_061012396
VERSION     XP_061012396.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156413.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..466
                     /product="CTD small phosphatase-like protein 2 isoform X1"
                     /calculated_mol_wt=52852
     Region          287..448
                     /region_name="HIF-SF_euk"
                     /note="Dullard-like phosphatase domain; TIGR02251"
                     /db_xref="CDD:274055"
     Site            order(293..297,301..302,348..351,355,388,404..405,
                     407..409)
                     /site_type="active"
                     /db_xref="CDD:319823"
     CDS             1..466
                     /gene="CTDSPL2"
                     /coded_by="XM_061156413.1:198..1598"
                     /db_xref="GeneID:133065922"
ORIGIN      
        1 mrlrtrkasq qsnqiqtqrt arakrkysev ddslpsggek tpknetglls sikkfikgst
       61 pkeerenpsk rsrierdidn nlitstprag ekpnkqisrv rrksqvngea gsyemtnqhv
      121 kqngklednp ssgspprttl lgtifspvfn ffspankngt sgsdspgqav eaeeivkqld
      181 meqvdeitts tttsangaay snqavqvrps inngleeaee tvnrdipplt apvtpdsgys
      241 sahaeatyee dwevfdpyyf ikhvppltee qlnrkpalpl ktrstpefsl vldldetlvh
      301 cslneledaa ltfpvlfqdv iyqvyvrlrp ffreflerms qmyeiilfta skkvyadkll
      361 nildpkkqlv rhrlfrehcv cvqgnyikdl nilgrdlskt iiidnspqaf ayqlsngipi
      421 eswfmdkndn ellklipfle klvelnedvr phirdrfrlh dllppd
//
LOCUS       XP_061012397             466 aa            linear   MAM 02-DEC-2023
DEFINITION  CTD small phosphatase-like protein 2 isoform X1 [Dama dama].
ACCESSION   XP_061012397
VERSION     XP_061012397.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156414.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..466
                     /product="CTD small phosphatase-like protein 2 isoform X1"
                     /calculated_mol_wt=52852
     Region          287..448
                     /region_name="HIF-SF_euk"
                     /note="Dullard-like phosphatase domain; TIGR02251"
                     /db_xref="CDD:274055"
     Site            order(293..297,301..302,348..351,355,388,404..405,
                     407..409)
                     /site_type="active"
                     /db_xref="CDD:319823"
     CDS             1..466
                     /gene="CTDSPL2"
                     /coded_by="XM_061156414.1:198..1598"
                     /db_xref="GeneID:133065922"
ORIGIN      
        1 mrlrtrkasq qsnqiqtqrt arakrkysev ddslpsggek tpknetglls sikkfikgst
       61 pkeerenpsk rsrierdidn nlitstprag ekpnkqisrv rrksqvngea gsyemtnqhv
      121 kqngklednp ssgspprttl lgtifspvfn ffspankngt sgsdspgqav eaeeivkqld
      181 meqvdeitts tttsangaay snqavqvrps inngleeaee tvnrdipplt apvtpdsgys
      241 sahaeatyee dwevfdpyyf ikhvppltee qlnrkpalpl ktrstpefsl vldldetlvh
      301 cslneledaa ltfpvlfqdv iyqvyvrlrp ffreflerms qmyeiilfta skkvyadkll
      361 nildpkkqlv rhrlfrehcv cvqgnyikdl nilgrdlskt iiidnspqaf ayqlsngipi
      421 eswfmdkndn ellklipfle klvelnedvr phirdrfrlh dllppd
//
LOCUS       XP_061012398             465 aa            linear   MAM 02-DEC-2023
DEFINITION  CTD small phosphatase-like protein 2 isoform X2 [Dama dama].
ACCESSION   XP_061012398
VERSION     XP_061012398.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156415.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..465
                     /product="CTD small phosphatase-like protein 2 isoform X2"
                     /calculated_mol_wt=52723
     Region          286..447
                     /region_name="HIF-SF_euk"
                     /note="Dullard-like phosphatase domain; TIGR02251"
                     /db_xref="CDD:274055"
     Site            order(292..296,300..301,347..350,354,387,403..404,
                     406..408)
                     /site_type="active"
                     /db_xref="CDD:319823"
     CDS             1..465
                     /gene="CTDSPL2"
                     /coded_by="XM_061156415.1:207..1604"
                     /db_xref="GeneID:133065922"
ORIGIN      
        1 mrlrtrkasq qsnqiqtqrt arakrkysev ddslpsggek tpknetglls sikkfikgst
       61 pkeerenpsk rsrierdidn nlitstprag ekpnkqisrv rrksqvngag syemtnqhvk
      121 qngklednps sgspprttll gtifspvfnf fspankngts gsdspgqave aeeivkqldm
      181 eqvdeittst ttsangaays nqavqvrpsi nngleeaeet vnrdipplta pvtpdsgyss
      241 ahaeatyeed wevfdpyyfi khvpplteeq lnrkpalplk trstpefslv ldldetlvhc
      301 slneledaal tfpvlfqdvi yqvyvrlrpf freflermsq myeiilftas kkvyadklln
      361 ildpkkqlvr hrlfrehcvc vqgnyikdln ilgrdlskti iidnspqafa yqlsngipie
      421 swfmdkndne llklipflek lvelnedvrp hirdrfrlhd llppd
//
LOCUS       XP_061012399             436 aa            linear   MAM 02-DEC-2023
DEFINITION  protein GOLM2 isoform X1 [Dama dama].
ACCESSION   XP_061012399
VERSION     XP_061012399.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156416.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..436
                     /product="protein GOLM2 isoform X1"
                     /calculated_mol_wt=49119
     Region          <30..>178
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
     CDS             1..436
                     /gene="GOLM2"
                     /coded_by="XM_061156416.1:102..1412"
                     /db_xref="GeneID:133065924"
ORIGIN      
        1 mvgfganrra grlpslvlav llvviavlaf nywsissrhv llqeelaelq gqvqrtevar
       61 grlekrnsdl lllvdshkkq idqkeadygr lssrlqareg lgkrceddkv klqnnisyqm
      121 adihhlkeql aelrqeflrq edqlqdyrkn strlvkrley esfqcgqqik elraqheeni
      181 kkladqflqe qkqeahkses kggneldtdn havpknipev aengagksee psshhiprgk
      241 eqikrggdag mpgieendla kaedvpvalk kppvsfsqye shqvishlpt gkplspnmvp
      301 dshinhngns rtskqnpsnp lqrlipgpnl esepriqaev lkqatkdrag dfhklkqsrf
      361 fdenespvdp qhgskladyn gddgnvgeye adkqaelayn eeedgdggee dvqddeerel
      421 qmdpadygkq rfndal
//
LOCUS       XP_061012400             380 aa            linear   MAM 02-DEC-2023
DEFINITION  protein GOLM2 isoform X2 [Dama dama].
ACCESSION   XP_061012400
VERSION     XP_061012400.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156417.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..380
                     /product="protein GOLM2 isoform X2"
                     /calculated_mol_wt=42953
     Region          <30..>178
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
     CDS             1..380
                     /gene="GOLM2"
                     /coded_by="XM_061156417.1:100..1242"
                     /db_xref="GeneID:133065924"
ORIGIN      
        1 mvgfganrra grlpslvlav llvviavlaf nywsissrhv llqeelaelq gqvqrtevar
       61 grlekrnsdl lllvdshkkq idqkeadygr lssrlqareg lgkrceddkv klqnnisyqm
      121 adihhlkeql aelrqeflrq edqlqdyrkn strlvkrley esfqcgqqik elraqheeni
      181 kkladqflqe qkqeahkses kggneldtdn havpknipev aengagksee psshhiprgk
      241 eqikrggdag mpgieendla kaedvpvalk kppvsfsqye shqvishlpt gkplspnmvp
      301 dshinhngns rtskqnpsnp lqrlipgpnl esepriqaev lkqatkdrag dfhklkqnde
      361 erelqmdpad ygkqrfndal
//
LOCUS       XP_061012401             790 aa            linear   MAM 02-DEC-2023
DEFINITION  ribosomal protein S6 kinase alpha-5 isoform X1 [Dama dama].
ACCESSION   XP_061012401
VERSION     XP_061012401.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156418.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..790
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..790
                     /product="ribosomal protein S6 kinase alpha-5 isoform X1"
                     /calculated_mol_wt=88510
     Region          39..371
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(46..49,52,54,70,72,106,122..125,168,172..173,175,
                     185..186)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          409..718
                     /region_name="STKc_MSK1_C"
                     /note="C-terminal catalytic domain of the Serine/Threonine
                     Kinase, Mitogen and stress-activated kinase 1; cd14179"
                     /db_xref="CDD:271081"
     Site            order(423..427,431,444,446,473,489..492,496,498,534..535,
                     537,539..540,542,555..556,559,574..578,580,707)
                     /site_type="active"
                     /db_xref="CDD:271081"
     Site            order(423..425,444,489..492,496,539..540,542,555,707)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271081"
     Site            order(427,496,498,534..535,537,539,559,574..578,580)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271081"
     Site            555..578
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271081"
     CDS             1..790
                     /gene="RPS6KA5"
                     /coded_by="XM_061156418.1:77..2449"
                     /db_xref="GeneID:133065927"
ORIGIN      
        1 meekggsggd aggeqlrvvk helrtanltg haekvgienf ellkvlgtga ygkvflvrkv
       61 sghdagklya mkvlkkaaiv qkakstehar aerqvleqvr qspflvtlhy afqteaklhl
      121 ildyinggel fthlsqrerf tehevqiyvg eivlalehlh klgiiyrdik lenilldsng
      181 hvmltdfgls kefvadeagr aysfcgtiey mapdivrggd sghdkavdww slgvlmyell
      241 tgaspftvdg eknsqaeisr rilkseppyp qemsavardl iqrllmkdpk krlgcgprda
      301 deikehpffq kinwddlaak kvpapfkpvi rdeldvsnfa eeftemdpty spaalpqsse
      361 rlfqgysfva psilfkrnaa vmdplqfhmg vdrpgethva rsamlkespf yqhydldlkd
      421 tplgegsfsi crkcvhkksn qafavkiisk rmeastqkev talrlceghp nivklhevfh
      481 dqlhtflvme llnggelfer ikrkkhfset easyimrklv savshmhdvg vvhrdlkpen
      541 llftdendnl eikvidfgfa rlkppdnqpl ktpcftlhya apellnhngy descdlwslg
      601 vilytmlsgq vpfqshdksl tctsaveimk kikkgdfsfe geawknvsqe akdliqgllt
      661 vdpnkrlkmp dlrynewlqd gsqlssnplm tpdilgssga avhtcvkatf hafnkykreg
      721 fclqnvdkap lakrrrmkkt ststetrsss sesshssssh sqgkstptra lqpghpaegg
      781 apeslfqfsd
//
LOCUS       XP_061012402             720 aa            linear   MAM 02-DEC-2023
DEFINITION  ribosomal protein S6 kinase alpha-5 isoform X2 [Dama dama].
ACCESSION   XP_061012402
VERSION     XP_061012402.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156419.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..720
                     /product="ribosomal protein S6 kinase alpha-5 isoform X2"
                     /calculated_mol_wt=81133
     Region          1..301
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Region          339..648
                     /region_name="STKc_MSK1_C"
                     /note="C-terminal catalytic domain of the Serine/Threonine
                     Kinase, Mitogen and stress-activated kinase 1; cd14179"
                     /db_xref="CDD:271081"
     Site            order(353..357,361,374,376,403,419..422,426,428,464..465,
                     467,469..470,472,485..486,489,504..508,510,637)
                     /site_type="active"
                     /db_xref="CDD:271081"
     Site            order(353..355,374,419..422,426,469..470,472,485,637)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271081"
     Site            order(357,426,428,464..465,467,469,489,504..508,510)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271081"
     Site            485..508
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271081"
     CDS             1..720
                     /gene="RPS6KA5"
                     /coded_by="XM_061156419.1:352..2514"
                     /db_xref="GeneID:133065927"
ORIGIN      
        1 mkvlkkaaiv qkakstehar aerqvleqvr qspflvtlhy afqteaklhl ildyinggel
       61 fthlsqrerf tehevqiyvg eivlalehlh klgiiyrdik lenilldsng hvmltdfgls
      121 kefvadeagr aysfcgtiey mapdivrggd sghdkavdww slgvlmyell tgaspftvdg
      181 eknsqaeisr rilkseppyp qemsavardl iqrllmkdpk krlgcgprda deikehpffq
      241 kinwddlaak kvpapfkpvi rdeldvsnfa eeftemdpty spaalpqsse rlfqgysfva
      301 psilfkrnaa vmdplqfhmg vdrpgethva rsamlkespf yqhydldlkd tplgegsfsi
      361 crkcvhkksn qafavkiisk rmeastqkev talrlceghp nivklhevfh dqlhtflvme
      421 llnggelfer ikrkkhfset easyimrklv savshmhdvg vvhrdlkpen llftdendnl
      481 eikvidfgfa rlkppdnqpl ktpcftlhya apellnhngy descdlwslg vilytmlsgq
      541 vpfqshdksl tctsaveimk kikkgdfsfe geawknvsqe akdliqgllt vdpnkrlkmp
      601 dlrynewlqd gsqlssnplm tpdilgssga avhtcvkatf hafnkykreg fclqnvdkap
      661 lakrrrmkkt ststetrsss sesshssssh sqgkstptra lqpghpaegg apeslfqfsd
//
LOCUS       XP_061012403             720 aa            linear   MAM 02-DEC-2023
DEFINITION  ribosomal protein S6 kinase alpha-5 isoform X2 [Dama dama].
ACCESSION   XP_061012403
VERSION     XP_061012403.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156420.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..720
                     /product="ribosomal protein S6 kinase alpha-5 isoform X2"
                     /calculated_mol_wt=81133
     Region          1..301
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Region          339..648
                     /region_name="STKc_MSK1_C"
                     /note="C-terminal catalytic domain of the Serine/Threonine
                     Kinase, Mitogen and stress-activated kinase 1; cd14179"
                     /db_xref="CDD:271081"
     Site            order(353..357,361,374,376,403,419..422,426,428,464..465,
                     467,469..470,472,485..486,489,504..508,510,637)
                     /site_type="active"
                     /db_xref="CDD:271081"
     Site            order(353..355,374,419..422,426,469..470,472,485,637)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271081"
     Site            order(357,426,428,464..465,467,469,489,504..508,510)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271081"
     Site            485..508
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271081"
     CDS             1..720
                     /gene="RPS6KA5"
                     /coded_by="XM_061156420.1:423..2585"
                     /db_xref="GeneID:133065927"
ORIGIN      
        1 mkvlkkaaiv qkakstehar aerqvleqvr qspflvtlhy afqteaklhl ildyinggel
       61 fthlsqrerf tehevqiyvg eivlalehlh klgiiyrdik lenilldsng hvmltdfgls
      121 kefvadeagr aysfcgtiey mapdivrggd sghdkavdww slgvlmyell tgaspftvdg
      181 eknsqaeisr rilkseppyp qemsavardl iqrllmkdpk krlgcgprda deikehpffq
      241 kinwddlaak kvpapfkpvi rdeldvsnfa eeftemdpty spaalpqsse rlfqgysfva
      301 psilfkrnaa vmdplqfhmg vdrpgethva rsamlkespf yqhydldlkd tplgegsfsi
      361 crkcvhkksn qafavkiisk rmeastqkev talrlceghp nivklhevfh dqlhtflvme
      421 llnggelfer ikrkkhfset easyimrklv savshmhdvg vvhrdlkpen llftdendnl
      481 eikvidfgfa rlkppdnqpl ktpcftlhya apellnhngy descdlwslg vilytmlsgq
      541 vpfqshdksl tctsaveimk kikkgdfsfe geawknvsqe akdliqgllt vdpnkrlkmp
      601 dlrynewlqd gsqlssnplm tpdilgssga avhtcvkatf hafnkykreg fclqnvdkap
      661 lakrrrmkkt ststetrsss sesshssssh sqgkstptra lqpghpaegg apeslfqfsd
//
LOCUS       XP_061012404             900 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 7B isoform X1 [Dama dama].
ACCESSION   XP_061012404
VERSION     XP_061012404.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156421.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..900
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..900
                     /product="tetratricopeptide repeat protein 7B isoform X1"
                     /calculated_mol_wt=98255
     Region          1..386
                     /region_name="TTC7_N"
                     /note="Tetratricopeptide repeat protein 7 N-terminal;
                     pfam19440"
                     /db_xref="CDD:466084"
     Region          365..391
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          371..611
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          431..459
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276808"
     Region          549..577
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          646..>821
                     /region_name="dnaA"
                     /note="chromosomal replication initiator protein DnaA;
                     cl42516"
                     /db_xref="CDD:455861"
     CDS             1..900
                     /gene="TTC7B"
                     /coded_by="XM_061156421.1:49..2751"
                     /db_xref="GeneID:133065928"
ORIGIN      
        1 matrkagsrl eteiercrse sqweripela rqlsakliah ddmaelllge akleqylkeh
       61 plrqgasprg prpqltevrk hltaaldrgn lkseflqess lvlaklhyve gdyegalsly
      121 arvgledwpl tgvppyrlrm aadayatqgl cleklpisss tsslrvdreq diitcyekag
      181 diallylqei ervilsniqn rspkpgpaph dqelgfflet glqrahvlyf kngnltrgvg
      241 rfrellrave trttqnlrmt iarqlaeill rgmceqsywn pledppcqsp lddplrkgan
      301 tktytltrka rvysgenifc pqenteeall lllisesman rdavlsripe hksdrlislq
      361 sasvvydllt ialgrrgqye mlsecleram kfafeefhlw yqfalslmaa gksaravkvl
      421 kecirlrpdd atipllaakl cmgslhwled aekfaktvvd agektsefka kgylalglty
      481 slqatdaslr gmqevlqrka llafqrahsl sptdhqaafy lalqlaisrq ipealgyvrq
      541 alqlqgddan slhllallls aqkhyhdaln iidmalseyp enfillfskv kleslsrgpd
      601 ealltckhml qiwkscynlt nprlhprhvs rglqsgagav gsglvpaeqr pqagppapld
      661 dagadlaars gslhwhrear gghglhaggc qplphvpqrp lharpgggap rergrgpavv
      721 rgglvhqphp reehaasgpd pppagplqsg redpagrgag elhsprgler pgrgpagsgq
      781 rrgghrvlpd gpgaggqqpr ralhghppra lsgpavpfss srarralpvi pralraappr
      841 pspsspapcp spsspapcps psspapcpsp sspapcpsps sparseqprp prrarprtsv
//
LOCUS       XP_061012406             882 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 7B isoform X2 [Dama dama].
ACCESSION   XP_061012406
VERSION     XP_061012406.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156423.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..882
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..882
                     /product="tetratricopeptide repeat protein 7B isoform X2"
                     /calculated_mol_wt=96873
     Region          1..386
                     /region_name="TTC7_N"
                     /note="Tetratricopeptide repeat protein 7 N-terminal;
                     pfam19440"
                     /db_xref="CDD:466084"
     Region          365..391
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          371..611
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          431..459
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276808"
     Region          549..577
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..882
                     /gene="TTC7B"
                     /coded_by="XM_061156423.1:49..2697"
                     /db_xref="GeneID:133065928"
ORIGIN      
        1 matrkagsrl eteiercrse sqweripela rqlsakliah ddmaelllge akleqylkeh
       61 plrqgasprg prpqltevrk hltaaldrgn lkseflqess lvlaklhyve gdyegalsly
      121 arvgledwpl tgvppyrlrm aadayatqgl cleklpisss tsslrvdreq diitcyekag
      181 diallylqei ervilsniqn rspkpgpaph dqelgfflet glqrahvlyf kngnltrgvg
      241 rfrellrave trttqnlrmt iarqlaeill rgmceqsywn pledppcqsp lddplrkgan
      301 tktytltrka rvysgenifc pqenteeall lllisesman rdavlsripe hksdrlislq
      361 sasvvydllt ialgrrgqye mlsecleram kfafeefhlw yqfalslmaa gksaravkvl
      421 kecirlrpdd atipllaakl cmgslhwled aekfaktvvd agektsefka kgylalglty
      481 slqatdaslr gmqevlqrka llafqrahsl sptdhqaafy lalqlaisrq ipealgyvrq
      541 alqlqgddan slhllallls aqkhyhdaln iidmalseyp enfillfskv kleslsrgpd
      601 ealltckhml qiwkscynlt npsdsgrgss lldrtiadrr qlntitlpdf sdpetgnspe
      661 vyfhgfpslf svssihatsv aasrveqals evasslqssa pkqgplhpwm tlaqiwlhag
      721 pdpppagplq sgredpagrg agelhsprgl erpgrgpags gqrrgghrvl pdgpgaggqq
      781 prralhghpp ralsgpavpf sssrarralp vipralraap prpspsspap cpspsspapc
      841 pspsspapcp spsspapcps pssparseqp rpprrarprt sv
//
LOCUS       XP_061012407             865 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 7B isoform X3 [Dama dama].
ACCESSION   XP_061012407
VERSION     XP_061012407.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156424.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..865
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..865
                     /product="tetratricopeptide repeat protein 7B isoform X3"
                     /calculated_mol_wt=94977
     Region          1..386
                     /region_name="TTC7_N"
                     /note="Tetratricopeptide repeat protein 7 N-terminal;
                     pfam19440"
                     /db_xref="CDD:466084"
     Region          365..391
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          371..611
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          431..459
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276808"
     Region          549..577
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..865
                     /gene="TTC7B"
                     /coded_by="XM_061156424.1:49..2646"
                     /db_xref="GeneID:133065928"
ORIGIN      
        1 matrkagsrl eteiercrse sqweripela rqlsakliah ddmaelllge akleqylkeh
       61 plrqgasprg prpqltevrk hltaaldrgn lkseflqess lvlaklhyve gdyegalsly
      121 arvgledwpl tgvppyrlrm aadayatqgl cleklpisss tsslrvdreq diitcyekag
      181 diallylqei ervilsniqn rspkpgpaph dqelgfflet glqrahvlyf kngnltrgvg
      241 rfrellrave trttqnlrmt iarqlaeill rgmceqsywn pledppcqsp lddplrkgan
      301 tktytltrka rvysgenifc pqenteeall lllisesman rdavlsripe hksdrlislq
      361 sasvvydllt ialgrrgqye mlsecleram kfafeefhlw yqfalslmaa gksaravkvl
      421 kecirlrpdd atipllaakl cmgslhwled aekfaktvvd agektsefka kgylalglty
      481 slqatdaslr gmqevlqrka llafqrahsl sptdhqaafy lalqlaisrq ipealgyvrq
      541 alqlqgddan slhllallls aqkhyhdaln iidmalseyp enfillfskv kleslsrgpd
      601 ealltckhml qiwkscynlt npsdsgrgss lldrtiadrr qlntitlpdf sdpetgsiha
      661 tsvaasrveq alsevasslq ssapkqgplh pwmtlaqiwl hagpdpppag plqsgredpa
      721 grgagelhsp rglerpgrgp agsgqrrggh rvlpdgpgag gqqprralhg hppralsgpa
      781 vpfsssrarr alpvipralr aapprpspss papcpspssp apcpspsspa pcpspsspap
      841 cpspsspars eqprpprrar prtsv
//
LOCUS       XP_061012408             860 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 7B isoform X4 [Dama dama].
ACCESSION   XP_061012408
VERSION     XP_061012408.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156425.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..860
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..860
                     /product="tetratricopeptide repeat protein 7B isoform X4"
                     /calculated_mol_wt=95824
     Region          1..386
                     /region_name="TTC7_N"
                     /note="Tetratricopeptide repeat protein 7 N-terminal;
                     pfam19440"
                     /db_xref="CDD:466084"
     Region          <343..851
                     /region_name="PEP_TPR_lipo"
                     /note="putative PEP-CTERM system TPR-repeat lipoprotein;
                     TIGR02917"
                     /db_xref="CDD:274350"
     Region          365..391
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          431..459
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276808"
     Region          549..577
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          712..>845
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          713..741
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          747..775
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(748,751..752,755..756,758,782,785..786,789..790,
                     792..793,816,819..820,823..824,827)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          780..810
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          815..843
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..860
                     /gene="TTC7B"
                     /coded_by="XM_061156425.1:49..2631"
                     /db_xref="GeneID:133065928"
ORIGIN      
        1 matrkagsrl eteiercrse sqweripela rqlsakliah ddmaelllge akleqylkeh
       61 plrqgasprg prpqltevrk hltaaldrgn lkseflqess lvlaklhyve gdyegalsly
      121 arvgledwpl tgvppyrlrm aadayatqgl cleklpisss tsslrvdreq diitcyekag
      181 diallylqei ervilsniqn rspkpgpaph dqelgfflet glqrahvlyf kngnltrgvg
      241 rfrellrave trttqnlrmt iarqlaeill rgmceqsywn pledppcqsp lddplrkgan
      301 tktytltrka rvysgenifc pqenteeall lllisesman rdavlsripe hksdrlislq
      361 sasvvydllt ialgrrgqye mlsecleram kfafeefhlw yqfalslmaa gksaravkvl
      421 kecirlrpdd atipllaakl cmgslhwled aekfaktvvd agektsefka kgylalglty
      481 slqatdaslr gmqevlqrka llafqrahsl sptdhqaafy lalqlaisrq ipealgyvrq
      541 alqlqgddan slhllallls aqkhyhdaln iidmalseyp enfillfskv kleslsrgpd
      601 ealltckhml qiwkscynlt npsdsgrgss lldrtiadrr qlntitlpdf sdpetgnspe
      661 vyfhgfpslf svssihatsv aasrveqals evasslqssa pkqgplhpwm tlaqiwlhaa
      721 evyigigkpa eatactqeaa nlfpmshnvl ymrgqvaelr gnvdearrwy eealsispth
      781 vksmqrlali lhqlgrysla ekilrdavqv nstahevwng lgevlqaqgn daaatecflt
      841 aleleasspa vpftvipral
//
LOCUS       XP_061012409             843 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 7B isoform X5 [Dama dama].
ACCESSION   XP_061012409
VERSION     XP_061012409.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156426.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..843
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..843
                     /product="tetratricopeptide repeat protein 7B isoform X5"
                     /calculated_mol_wt=93928
     Region          1..386
                     /region_name="TTC7_N"
                     /note="Tetratricopeptide repeat protein 7 N-terminal;
                     pfam19440"
                     /db_xref="CDD:466084"
     Region          <343..834
                     /region_name="PEP_TPR_lipo"
                     /note="putative PEP-CTERM system TPR-repeat lipoprotein;
                     TIGR02917"
                     /db_xref="CDD:274350"
     Region          365..391
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          431..459
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276808"
     Region          549..577
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          695..>828
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          696..724
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          730..758
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(731,734..735,738..739,741,765,768..769,772..773,
                     775..776,799,802..803,806..807,810)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          763..793
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          798..826
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..843
                     /gene="TTC7B"
                     /coded_by="XM_061156426.1:49..2580"
                     /db_xref="GeneID:133065928"
ORIGIN      
        1 matrkagsrl eteiercrse sqweripela rqlsakliah ddmaelllge akleqylkeh
       61 plrqgasprg prpqltevrk hltaaldrgn lkseflqess lvlaklhyve gdyegalsly
      121 arvgledwpl tgvppyrlrm aadayatqgl cleklpisss tsslrvdreq diitcyekag
      181 diallylqei ervilsniqn rspkpgpaph dqelgfflet glqrahvlyf kngnltrgvg
      241 rfrellrave trttqnlrmt iarqlaeill rgmceqsywn pledppcqsp lddplrkgan
      301 tktytltrka rvysgenifc pqenteeall lllisesman rdavlsripe hksdrlislq
      361 sasvvydllt ialgrrgqye mlsecleram kfafeefhlw yqfalslmaa gksaravkvl
      421 kecirlrpdd atipllaakl cmgslhwled aekfaktvvd agektsefka kgylalglty
      481 slqatdaslr gmqevlqrka llafqrahsl sptdhqaafy lalqlaisrq ipealgyvrq
      541 alqlqgddan slhllallls aqkhyhdaln iidmalseyp enfillfskv kleslsrgpd
      601 ealltckhml qiwkscynlt npsdsgrgss lldrtiadrr qlntitlpdf sdpetgsiha
      661 tsvaasrveq alsevasslq ssapkqgplh pwmtlaqiwl haaevyigig kpaeatactq
      721 eaanlfpmsh nvlymrgqva elrgnvdear rwyeealsis pthvksmqrl alilhqlgry
      781 slaekilrda vqvnstahev wnglgevlqa qgndaaatec fltaleleas spavpftvip
      841 ral
//
LOCUS       XP_061012410             796 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 7B isoform X6 [Dama dama].
ACCESSION   XP_061012410
VERSION     XP_061012410.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156427.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..796
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..796
                     /product="tetratricopeptide repeat protein 7B isoform X6"
                     /calculated_mol_wt=88995
     Region          1..386
                     /region_name="TTC7_N"
                     /note="Tetratricopeptide repeat protein 7 N-terminal;
                     pfam19440"
                     /db_xref="CDD:466084"
     Region          365..586
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          365..391
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          431..459
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276808"
     Region          499..779
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          549..577
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          656..>781
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          683..711
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(684,687..688,691..692,694,718,721..722,725..726,
                     728..729,752,755..756,759..760,763)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          716..746
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          751..779
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..796
                     /gene="TTC7B"
                     /coded_by="XM_061156427.1:49..2439"
                     /db_xref="GeneID:133065928"
ORIGIN      
        1 matrkagsrl eteiercrse sqweripela rqlsakliah ddmaelllge akleqylkeh
       61 plrqgasprg prpqltevrk hltaaldrgn lkseflqess lvlaklhyve gdyegalsly
      121 arvgledwpl tgvppyrlrm aadayatqgl cleklpisss tsslrvdreq diitcyekag
      181 diallylqei ervilsniqn rspkpgpaph dqelgfflet glqrahvlyf kngnltrgvg
      241 rfrellrave trttqnlrmt iarqlaeill rgmceqsywn pledppcqsp lddplrkgan
      301 tktytltrka rvysgenifc pqenteeall lllisesman rdavlsripe hksdrlislq
      361 sasvvydllt ialgrrgqye mlsecleram kfafeefhlw yqfalslmaa gksaravkvl
      421 kecirlrpdd atipllaakl cmgslhwled aekfaktvvd agektsefka kgylalglty
      481 slqatdaslr gmqevlqrka llafqrahsl sptdhqaafy lalqlaisrq ipealgyvrq
      541 alqlqgddan slhllallls aqkhyhdaln iidmalseyp enfillfskv kleslsrgpd
      601 ealltckhml qiwkscynlt npsdsgrgss lldrtiadrr qlntitlpdf sdpetaevyi
      661 gigkpaeata ctqeaanlfp mshnvlymrg qvaelrgnvd earrwyeeal sispthvksm
      721 qrlalilhql gryslaekil rdavqvnsta hevwnglgev lqaqgndaaa tecfltalel
      781 easspavpft vipral
//
LOCUS       XP_061012411             914 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 7B isoform X7 [Dama dama].
ACCESSION   XP_061012411
VERSION     XP_061012411.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156428.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..914
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..914
                     /product="tetratricopeptide repeat protein 7B isoform X7"
                     /calculated_mol_wt=101595
     Region          1..386
                     /region_name="TTC7_N"
                     /note="Tetratricopeptide repeat protein 7 N-terminal;
                     pfam19440"
                     /db_xref="CDD:466084"
     Region          365..391
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          371..611
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          431..459
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276808"
     Region          549..577
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          766..>899
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          767..795
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          801..829
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(802,805..806,809..810,812,836,839..840,843..844,
                     846..847,870,873..874,877..878,881)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          834..864
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          869..897
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..914
                     /gene="TTC7B"
                     /coded_by="XM_061156428.1:49..2793"
                     /db_xref="GeneID:133065928"
ORIGIN      
        1 matrkagsrl eteiercrse sqweripela rqlsakliah ddmaelllge akleqylkeh
       61 plrqgasprg prpqltevrk hltaaldrgn lkseflqess lvlaklhyve gdyegalsly
      121 arvgledwpl tgvppyrlrm aadayatqgl cleklpisss tsslrvdreq diitcyekag
      181 diallylqei ervilsniqn rspkpgpaph dqelgfflet glqrahvlyf kngnltrgvg
      241 rfrellrave trttqnlrmt iarqlaeill rgmceqsywn pledppcqsp lddplrkgan
      301 tktytltrka rvysgenifc pqenteeall lllisesman rdavlsripe hksdrlislq
      361 sasvvydllt ialgrrgqye mlsecleram kfafeefhlw yqfalslmaa gksaravkvl
      421 kecirlrpdd atipllaakl cmgslhwled aekfaktvvd agektsefka kgylalglty
      481 slqatdaslr gmqevlqrka llafqrahsl sptdhqaafy lalqlaisrq ipealgyvrq
      541 alqlqgddan slhllallls aqkhyhdaln iidmalseyp enfillfskv kleslsrgpd
      601 ealltckhml qiwkscynlt npsdsgrgss lldrtiadrr qlntitlpdf sdpetvsdss
      661 sssslsrtes plhlfvsshl hshpkpdtfv wppaarsvsd pgpcqeaslc nspevyfhgf
      721 pslfsvssih atsvaasrve qalsevassl qssapkqgpl hpwmtlaqiw lhaaevyigi
      781 gkpaeatact qeaanlfpms hnvlymrgqv aelrgnvdea rrwyeealsi spthvksmqr
      841 lalilhqlgr yslaekilrd avqvnstahe vwnglgevlq aqgndaaate cfltalelea
      901 sspavpftvi pral
//
LOCUS       XP_061012412             150 aa            linear   MAM 02-DEC-2023
DEFINITION  calmodulin-1 isoform X1 [Dama dama].
ACCESSION   XP_061012412
VERSION     XP_061012412.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156429.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..150
                     /product="calmodulin-1 isoform X1"
                     /calculated_mol_wt=16835
     Region          3..150
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..150
                     /gene="CALM1"
                     /coded_by="XM_061156429.1:1..453"
                     /db_xref="GeneID:133065929"
ORIGIN      
        1 mqadqlteeq iaefkeafsl fdkdgdgtit tkelgtvmrs lgqnpteael qdminevdad
       61 gngtidfpef ltmmarkmkd tdseeeirea frvfdkdgng yisaaelrhv mtnlgekltd
      121 eevdemirea didgdgqvny eefvqmmtak
//
LOCUS       XP_061012413             149 aa            linear   MAM 02-DEC-2023
DEFINITION  calmodulin-1 isoform X2 [Dama dama].
ACCESSION   XP_061012413
VERSION     XP_061012413.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156430.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..149
                     /product="calmodulin-1 isoform X2"
                     /calculated_mol_wt=16706
     Region          1..149
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..149
                     /gene="CALM1"
                     /coded_by="XM_061156430.1:178..627"
                     /db_xref="GeneID:133065929"
ORIGIN      
        1 madqlteeqi aefkeafslf dkdgdgtitt kelgtvmrsl gqnpteaelq dminevdadg
       61 ngtidfpefl tmmarkmkdt dseeeireaf rvfdkdgngy isaaelrhvm tnlgekltde
      121 evdemiread idgdgqvnye efvqmmtak
//
LOCUS       XP_061012414            1155 aa            linear   MAM 02-DEC-2023
DEFINITION  nuclear exosome regulator NRDE2 [Dama dama].
ACCESSION   XP_061012414
VERSION     XP_061012414.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156431.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1155
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1155
                     /product="nuclear exosome regulator NRDE2"
                     /calculated_mol_wt=130121
     Region          161..256
                     /region_name="NRDE2_MID"
                     /note="MTR4-interacting domain (MID) found in nuclear
                     exosome regulator NRDE2 and similar proteins; cd22200"
                     /db_xref="CDD:412062"
     Site            order(161..169,172..173,177..178,180,182..196,199..201,
                     203..205,213..215,219..220,222..223,226..232,240..241,
                     248..256)
                     /site_type="other"
                     /note="MTR4 binding site [polypeptide binding]"
                     /db_xref="CDD:412062"
     Region          313..645
                     /region_name="NRDE-2"
                     /note="necessary for RNA interference; pfam08424"
                     /db_xref="CDD:462472"
     CDS             1..1155
                     /gene="NRDE2"
                     /coded_by="XM_061156431.1:87..3554"
                     /db_xref="GeneID:133065931"
ORIGIN      
        1 malfpafagv aeapdsgrke ldwlsnpsfc vgaitslsrq teeaskapvs egspltrspl
       61 ksepsdesdt nrkpkeagrk kkkekkkrrq rehhreaksr rgrsgsrgse pgagserdrp
      121 sggirdskga sekpnqenna avdtgrhcvw lediqaltge tfrtdkkpdp anweykslyr
      181 gdiarykrkg dsclglnpkk qcvswegtst ekkrshkhte ryftkksvgl mseaglsvsr
      241 qpvapssqpl sfipvggmdd vapppaswln plgiydqvtt qwlqgqgpse qesrppdsqp
      301 dresvllkar veefnrkvre nprdtelwma fvafqdevmr spglyaveeg epetrkrslr
      361 lvlekklail eraiesnpss vdlklaklkl caefwepttl lkewqklifl hpnntalwqk
      421 yllfcqsqfs tfsvskiqsl ygkclstlsa vrdgsivshp elpgteeamf alflqqchfl
      481 rqaghsekav slfqamvdft ffkpdsvegl ptkgqveffe pfwdsgepra gekgargwra
      541 wmhqqewggw vavspddede epedeeqdir dktlprwriw laaersrdrr hwrpwrpdka
      601 rkqteedced perqvlfddl gqslirlssp dlqfqlivaf lqflgvpsgf sppasclyla
      661 mdensifdne lydekpltfl dlscsgvgcv grmdplggrh wprgpsrege efirnvfhla
      721 lplfagrers qlcvfwlrye itkviwclht knkkrlkslg knckklaknl lkepdnrnss
      781 clwqqyahle wllgntedar kvfeaalgta ggggladadl celgllyaal eaelsppvgg
      841 aaparavrvl tglaergpsg pcpgqpsavh vlkarkayeh alqdclaery gpdqglpdrl
      901 srlvtlakcf mlfqyltvgi gaaarvyeqv faglrgsvsa egaglegale avtlmhtsll
      961 rfhgrvaahp laplrealse alrlypgnql lwrsyvqiqs kshsasrtrr ffqavtrsak
     1021 hlepwlfaie aermrkrlvd avqrvdgrev hatlpeiglt hriralfesa mrsahgsqcp
     1081 llwrmylnfl vslgnkersk gvfykalqnc pwakalymda veyfpdemqe vvdlmtekel
     1141 rvrlpleele llled
//
LOCUS       XP_061012415             440 aa            linear   MAM 02-DEC-2023
DEFINITION  26S proteasome regulatory subunit 4 [Dama dama].
ACCESSION   XP_061012415
VERSION     XP_061012415.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156432.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..440
                     /product="26S proteasome regulatory subunit 4"
                     /calculated_mol_wt=49054
     Region          1..440
                     /region_name="PTZ00361"
                     /note="26 proteosome regulatory subunit 4-like protein;
                     Provisional"
                     /db_xref="CDD:185575"
     CDS             1..440
                     /gene="PSMC1"
                     /coded_by="XM_061156432.1:57..1379"
                     /db_xref="GeneID:133065933"
ORIGIN      
        1 mgqsqsgghg pgggkkddkd kkkkyeppvp trvgkkkkkt kgpdaasklp lvtphtqcrl
       61 kllklerikd yllmeeefir nqeqmkplee kqeeerskvd dlrgtpmsvg tleeiiddnh
      121 aivstsvgse hyvsilsfvd kdllepgcsv llnhkvhavi gvlmddtdpl vtvmkvekap
      181 qetyadiggl dnqiqeikes velplthpey yeemgikppk gvilygppgt gktllakava
      241 nqtsatflrv vgseliqkyl gdgpklvrel frvaeehaps ivfideidai gtkrydsnsg
      301 gereiqrtml ellnqldgfd srgdvkvima tnrietldpa lirpgridrk iefplpdekt
      361 kkrifqihts rmtladdvtl ddlimakddl sgadikaict eaglmalrer rmkvtnedfk
      421 kskenvlykk qegtpeglyl
//
LOCUS       XP_061012416             398 aa            linear   MAM 02-DEC-2023
DEFINITION  potassium channel subfamily K member 13 [Dama dama].
ACCESSION   XP_061012416
VERSION     XP_061012416.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156433.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..398
                     /product="potassium channel subfamily K member 13"
                     /calculated_mol_wt=41576
     Region          80..152
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     Region          <216..279
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     CDS             1..398
                     /gene="KCNK13"
                     /coded_by="XM_061156433.1:1..1197"
                     /db_xref="GeneID:133065934"
ORIGIN      
        1 magrgcgggc gpgranedna rflllgalla lyllggaavf salerpherq arqrweerla
       61 gfgrrhnlsr dalrgflrhf eeaaaagvrv dgarprwdfp gafyfvgtvv stigfgmatp
      121 atvggkvfli vygllgcsst llffnlfler litviahvtr wcgarrpgrr agpragspgl
      181 aaagkpsvrv vllalgaasl alccgaaaly aaaegwgyld alyfcfvafs tigfgdlvsg
      241 qqarydgrgl yrvanfvlll sgvcclyslf nvvsilvrqa vnwalgraag agcrrgrgrg
      301 gpprrnavgp grvrsgsgga aetdggsgar rlsgemvsmk dllaankasl avlqkqlsea
      361 asgrprrast pavddefsgg vgafaimnsr laetsadr
//
LOCUS       XP_061012417             670 aa            linear   MAM 02-DEC-2023
DEFINITION  tyrosyl-DNA phosphodiesterase 1 isoform X1 [Dama dama].
ACCESSION   XP_061012417
VERSION     XP_061012417.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156434.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..670
                     /product="tyrosyl-DNA phosphodiesterase 1 isoform X1"
                     /calculated_mol_wt=75234
     Region          228..644
                     /region_name="Tyr-DNA_phospho"
                     /note="Tyrosyl-DNA phosphodiesterase; pfam06087"
                     /db_xref="CDD:461824"
     CDS             1..670
                     /gene="TDP1"
                     /coded_by="XM_061156434.1:54..2066"
                     /db_xref="GeneID:133065935"
ORIGIN      
        1 mcfadqlrgk retfppfscf cqpwpggert esdvrpvlcq tpprhlsrsr wkderrrsmt
       61 sqegnygkwt isssdeseee kpqldkpsas llpharqgat gqpkytcsea rkaahrrkle
      121 pvkfsstdsv seaspckrqk sgsqedlgwc lsssedelpr elqqeqakas rvkeekgpps
      181 prdrvalgag phspptshgl peeedeqets gegqdvwdll degnpfqfyl trvsgikpky
      241 nsgalhikdi lsplfgtlvs saqfnycfdv dwlvrqyppe frkkpvllvh gdkreakarl
      301 vaeakpygnv alcqakldia fgthhtkmml llyeeglrvv ihtsnlired whqktqgvwl
      361 splyprivhg ahrsgesatr fkadlisyla aynaaplkew idtiqehdls etnvyliast
      421 pgrfqgnqkd nwghfrlrkl lkehgsptpk aeswpvigqf ssigsmgade skwlcsefke
      481 slvtlgresr tlgsavplhl iypsvenvrt slegypaggs lpysiqtaek qnwlhsyfhk
      541 wsadtsgrsn amphiktymr aspdfsqiaw flvtsanlsk aawgalekng aqlmirsyel
      601 gvlflpsafg ldsfkvkqkf fsgssqepaa sfpvpydlpp elygdrdrpw iwnipyvkap
      661 dahgnmwvps
//
LOCUS       XP_061012419             612 aa            linear   MAM 02-DEC-2023
DEFINITION  tyrosyl-DNA phosphodiesterase 1 isoform X2 [Dama dama].
ACCESSION   XP_061012419
VERSION     XP_061012419.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156436.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..612
                     /product="tyrosyl-DNA phosphodiesterase 1 isoform X2"
                     /calculated_mol_wt=68329
     Region          170..586
                     /region_name="Tyr-DNA_phospho"
                     /note="Tyrosyl-DNA phosphodiesterase; pfam06087"
                     /db_xref="CDD:461824"
     CDS             1..612
                     /gene="TDP1"
                     /coded_by="XM_061156436.1:195..2033"
                     /db_xref="GeneID:133065935"
ORIGIN      
        1 mtsqegnygk wtisssdese eekpqldkps asllpharqg atgqpkytcs earkaahrrk
       61 lepvkfsstd svseaspckr qksgsqedlg wclsssedel prelqqeqak asrvkeekgp
      121 psprdrvalg agphspptsh glpeeedeqe tsgegqdvwd lldegnpfqf yltrvsgikp
      181 kynsgalhik dilsplfgtl vssaqfnycf dvdwlvrqyp pefrkkpvll vhgdkreaka
      241 rlvaeakpyg nvalcqakld iafgthhtkm mlllyeeglr vvihtsnlir edwhqktqgv
      301 wlsplypriv hgahrsgesa trfkadlisy laaynaaplk ewidtiqehd lsetnvylia
      361 stpgrfqgnq kdnwghfrlr kllkehgspt pkaeswpvig qfssigsmga deskwlcsef
      421 keslvtlgre srtlgsavpl hliypsvenv rtslegypag gslpysiqta ekqnwlhsyf
      481 hkwsadtsgr snamphikty mraspdfsqi awflvtsanl skaawgalek ngaqlmirsy
      541 elgvlflpsa fgldsfkvkq kffsgssqep aasfpvpydl ppelygdrdr pwiwnipyvk
      601 apdahgnmwv ps
//
LOCUS       XP_061012420             612 aa            linear   MAM 02-DEC-2023
DEFINITION  tyrosyl-DNA phosphodiesterase 1 isoform X2 [Dama dama].
ACCESSION   XP_061012420
VERSION     XP_061012420.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156437.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..612
                     /product="tyrosyl-DNA phosphodiesterase 1 isoform X2"
                     /calculated_mol_wt=68329
     Region          170..586
                     /region_name="Tyr-DNA_phospho"
                     /note="Tyrosyl-DNA phosphodiesterase; pfam06087"
                     /db_xref="CDD:461824"
     CDS             1..612
                     /gene="TDP1"
                     /coded_by="XM_061156437.1:274..2112"
                     /db_xref="GeneID:133065935"
ORIGIN      
        1 mtsqegnygk wtisssdese eekpqldkps asllpharqg atgqpkytcs earkaahrrk
       61 lepvkfsstd svseaspckr qksgsqedlg wclsssedel prelqqeqak asrvkeekgp
      121 psprdrvalg agphspptsh glpeeedeqe tsgegqdvwd lldegnpfqf yltrvsgikp
      181 kynsgalhik dilsplfgtl vssaqfnycf dvdwlvrqyp pefrkkpvll vhgdkreaka
      241 rlvaeakpyg nvalcqakld iafgthhtkm mlllyeeglr vvihtsnlir edwhqktqgv
      301 wlsplypriv hgahrsgesa trfkadlisy laaynaaplk ewidtiqehd lsetnvylia
      361 stpgrfqgnq kdnwghfrlr kllkehgspt pkaeswpvig qfssigsmga deskwlcsef
      421 keslvtlgre srtlgsavpl hliypsvenv rtslegypag gslpysiqta ekqnwlhsyf
      481 hkwsadtsgr snamphikty mraspdfsqi awflvtsanl skaawgalek ngaqlmirsy
      541 elgvlflpsa fgldsfkvkq kffsgssqep aasfpvpydl ppelygdrdr pwiwnipyvk
      601 apdahgnmwv ps
//
LOCUS       XP_061012421             612 aa            linear   MAM 02-DEC-2023
DEFINITION  tyrosyl-DNA phosphodiesterase 1 isoform X2 [Dama dama].
ACCESSION   XP_061012421
VERSION     XP_061012421.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156438.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..612
                     /product="tyrosyl-DNA phosphodiesterase 1 isoform X2"
                     /calculated_mol_wt=68329
     Region          170..586
                     /region_name="Tyr-DNA_phospho"
                     /note="Tyrosyl-DNA phosphodiesterase; pfam06087"
                     /db_xref="CDD:461824"
     CDS             1..612
                     /gene="TDP1"
                     /coded_by="XM_061156438.1:220..2058"
                     /db_xref="GeneID:133065935"
ORIGIN      
        1 mtsqegnygk wtisssdese eekpqldkps asllpharqg atgqpkytcs earkaahrrk
       61 lepvkfsstd svseaspckr qksgsqedlg wclsssedel prelqqeqak asrvkeekgp
      121 psprdrvalg agphspptsh glpeeedeqe tsgegqdvwd lldegnpfqf yltrvsgikp
      181 kynsgalhik dilsplfgtl vssaqfnycf dvdwlvrqyp pefrkkpvll vhgdkreaka
      241 rlvaeakpyg nvalcqakld iafgthhtkm mlllyeeglr vvihtsnlir edwhqktqgv
      301 wlsplypriv hgahrsgesa trfkadlisy laaynaaplk ewidtiqehd lsetnvylia
      361 stpgrfqgnq kdnwghfrlr kllkehgspt pkaeswpvig qfssigsmga deskwlcsef
      421 keslvtlgre srtlgsavpl hliypsvenv rtslegypag gslpysiqta ekqnwlhsyf
      481 hkwsadtsgr snamphikty mraspdfsqi awflvtsanl skaawgalek ngaqlmirsy
      541 elgvlflpsa fgldsfkvkq kffsgssqep aasfpvpydl ppelygdrdr pwiwnipyvk
      601 apdahgnmwv ps
//
LOCUS       XP_061012422             612 aa            linear   MAM 02-DEC-2023
DEFINITION  tyrosyl-DNA phosphodiesterase 1 isoform X2 [Dama dama].
ACCESSION   XP_061012422
VERSION     XP_061012422.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156439.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..612
                     /product="tyrosyl-DNA phosphodiesterase 1 isoform X2"
                     /calculated_mol_wt=68329
     Region          170..586
                     /region_name="Tyr-DNA_phospho"
                     /note="Tyrosyl-DNA phosphodiesterase; pfam06087"
                     /db_xref="CDD:461824"
     CDS             1..612
                     /gene="TDP1"
                     /coded_by="XM_061156439.1:156..1994"
                     /db_xref="GeneID:133065935"
ORIGIN      
        1 mtsqegnygk wtisssdese eekpqldkps asllpharqg atgqpkytcs earkaahrrk
       61 lepvkfsstd svseaspckr qksgsqedlg wclsssedel prelqqeqak asrvkeekgp
      121 psprdrvalg agphspptsh glpeeedeqe tsgegqdvwd lldegnpfqf yltrvsgikp
      181 kynsgalhik dilsplfgtl vssaqfnycf dvdwlvrqyp pefrkkpvll vhgdkreaka
      241 rlvaeakpyg nvalcqakld iafgthhtkm mlllyeeglr vvihtsnlir edwhqktqgv
      301 wlsplypriv hgahrsgesa trfkadlisy laaynaaplk ewidtiqehd lsetnvylia
      361 stpgrfqgnq kdnwghfrlr kllkehgspt pkaeswpvig qfssigsmga deskwlcsef
      421 keslvtlgre srtlgsavpl hliypsvenv rtslegypag gslpysiqta ekqnwlhsyf
      481 hkwsadtsgr snamphikty mraspdfsqi awflvtsanl skaawgalek ngaqlmirsy
      541 elgvlflpsa fgldsfkvkq kffsgssqep aasfpvpydl ppelygdrdr pwiwnipyvk
      601 apdahgnmwv ps
//
LOCUS       XP_061012423             612 aa            linear   MAM 02-DEC-2023
DEFINITION  tyrosyl-DNA phosphodiesterase 1 isoform X2 [Dama dama].
ACCESSION   XP_061012423
VERSION     XP_061012423.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156440.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..612
                     /product="tyrosyl-DNA phosphodiesterase 1 isoform X2"
                     /calculated_mol_wt=68329
     Region          170..586
                     /region_name="Tyr-DNA_phospho"
                     /note="Tyrosyl-DNA phosphodiesterase; pfam06087"
                     /db_xref="CDD:461824"
     CDS             1..612
                     /gene="TDP1"
                     /coded_by="XM_061156440.1:235..2073"
                     /db_xref="GeneID:133065935"
ORIGIN      
        1 mtsqegnygk wtisssdese eekpqldkps asllpharqg atgqpkytcs earkaahrrk
       61 lepvkfsstd svseaspckr qksgsqedlg wclsssedel prelqqeqak asrvkeekgp
      121 psprdrvalg agphspptsh glpeeedeqe tsgegqdvwd lldegnpfqf yltrvsgikp
      181 kynsgalhik dilsplfgtl vssaqfnycf dvdwlvrqyp pefrkkpvll vhgdkreaka
      241 rlvaeakpyg nvalcqakld iafgthhtkm mlllyeeglr vvihtsnlir edwhqktqgv
      301 wlsplypriv hgahrsgesa trfkadlisy laaynaaplk ewidtiqehd lsetnvylia
      361 stpgrfqgnq kdnwghfrlr kllkehgspt pkaeswpvig qfssigsmga deskwlcsef
      421 keslvtlgre srtlgsavpl hliypsvenv rtslegypag gslpysiqta ekqnwlhsyf
      481 hkwsadtsgr snamphikty mraspdfsqi awflvtsanl skaawgalek ngaqlmirsy
      541 elgvlflpsa fgldsfkvkq kffsgssqep aasfpvpydl ppelygdrdr pwiwnipyvk
      601 apdahgnmwv ps
//
LOCUS       XP_061012424             612 aa            linear   MAM 02-DEC-2023
DEFINITION  tyrosyl-DNA phosphodiesterase 1 isoform X2 [Dama dama].
ACCESSION   XP_061012424
VERSION     XP_061012424.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156441.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..612
                     /product="tyrosyl-DNA phosphodiesterase 1 isoform X2"
                     /calculated_mol_wt=68329
     Region          170..586
                     /region_name="Tyr-DNA_phospho"
                     /note="Tyrosyl-DNA phosphodiesterase; pfam06087"
                     /db_xref="CDD:461824"
     CDS             1..612
                     /gene="TDP1"
                     /coded_by="XM_061156441.1:176..2014"
                     /db_xref="GeneID:133065935"
ORIGIN      
        1 mtsqegnygk wtisssdese eekpqldkps asllpharqg atgqpkytcs earkaahrrk
       61 lepvkfsstd svseaspckr qksgsqedlg wclsssedel prelqqeqak asrvkeekgp
      121 psprdrvalg agphspptsh glpeeedeqe tsgegqdvwd lldegnpfqf yltrvsgikp
      181 kynsgalhik dilsplfgtl vssaqfnycf dvdwlvrqyp pefrkkpvll vhgdkreaka
      241 rlvaeakpyg nvalcqakld iafgthhtkm mlllyeeglr vvihtsnlir edwhqktqgv
      301 wlsplypriv hgahrsgesa trfkadlisy laaynaaplk ewidtiqehd lsetnvylia
      361 stpgrfqgnq kdnwghfrlr kllkehgspt pkaeswpvig qfssigsmga deskwlcsef
      421 keslvtlgre srtlgsavpl hliypsvenv rtslegypag gslpysiqta ekqnwlhsyf
      481 hkwsadtsgr snamphikty mraspdfsqi awflvtsanl skaawgalek ngaqlmirsy
      541 elgvlflpsa fgldsfkvkq kffsgssqep aasfpvpydl ppelygdrdr pwiwnipyvk
      601 apdahgnmwv ps
//
LOCUS       XP_061012425             612 aa            linear   MAM 02-DEC-2023
DEFINITION  tyrosyl-DNA phosphodiesterase 1 isoform X2 [Dama dama].
ACCESSION   XP_061012425
VERSION     XP_061012425.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156442.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..612
                     /product="tyrosyl-DNA phosphodiesterase 1 isoform X2"
                     /calculated_mol_wt=68329
     Region          170..586
                     /region_name="Tyr-DNA_phospho"
                     /note="Tyrosyl-DNA phosphodiesterase; pfam06087"
                     /db_xref="CDD:461824"
     CDS             1..612
                     /gene="TDP1"
                     /coded_by="XM_061156442.1:117..1955"
                     /db_xref="GeneID:133065935"
ORIGIN      
        1 mtsqegnygk wtisssdese eekpqldkps asllpharqg atgqpkytcs earkaahrrk
       61 lepvkfsstd svseaspckr qksgsqedlg wclsssedel prelqqeqak asrvkeekgp
      121 psprdrvalg agphspptsh glpeeedeqe tsgegqdvwd lldegnpfqf yltrvsgikp
      181 kynsgalhik dilsplfgtl vssaqfnycf dvdwlvrqyp pefrkkpvll vhgdkreaka
      241 rlvaeakpyg nvalcqakld iafgthhtkm mlllyeeglr vvihtsnlir edwhqktqgv
      301 wlsplypriv hgahrsgesa trfkadlisy laaynaaplk ewidtiqehd lsetnvylia
      361 stpgrfqgnq kdnwghfrlr kllkehgspt pkaeswpvig qfssigsmga deskwlcsef
      421 keslvtlgre srtlgsavpl hliypsvenv rtslegypag gslpysiqta ekqnwlhsyf
      481 hkwsadtsgr snamphikty mraspdfsqi awflvtsanl skaawgalek ngaqlmirsy
      541 elgvlflpsa fgldsfkvkq kffsgssqep aasfpvpydl ppelygdrdr pwiwnipyvk
      601 apdahgnmwv ps
//
LOCUS       XP_061012426             551 aa            linear   MAM 02-DEC-2023
DEFINITION  tyrosyl-DNA phosphodiesterase 1 isoform X3 [Dama dama].
ACCESSION   XP_061012426
VERSION     XP_061012426.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156443.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..551
                     /product="tyrosyl-DNA phosphodiesterase 1 isoform X3"
                     /calculated_mol_wt=61953
     Region          228..>518
                     /region_name="Tyr-DNA_phospho"
                     /note="Tyrosyl-DNA phosphodiesterase; pfam06087"
                     /db_xref="CDD:461824"
     CDS             1..551
                     /gene="TDP1"
                     /coded_by="XM_061156443.1:60..1715"
                     /db_xref="GeneID:133065935"
ORIGIN      
        1 mcfadqlrgk retfppfscf cqpwpggert esdvrpvlcq tpprhlsrsr wkderrrsmt
       61 sqegnygkwt isssdeseee kpqldkpsas llpharqgat gqpkytcsea rkaahrrkle
      121 pvkfsstdsv seaspckrqk sgsqedlgwc lsssedelpr elqqeqakas rvkeekgpps
      181 prdrvalgag phspptshgl peeedeqets gegqdvwdll degnpfqfyl trvsgikpky
      241 nsgalhikdi lsplfgtlvs saqfnycfdv dwlvrqyppe frkkpvllvh gdkreakarl
      301 vaeakpygnv alcqakldia fgthhtkmml llyeeglrvv ihtsnlired whqktqgvwl
      361 splyprivhg ahrsgesatr fkadlisyla aynaaplkew idtiqehdls etnvyliast
      421 pgrfqgnqkd nwghfrlrkl lkehgsptpk aeswpvigqf ssigsmgade skwlcsefke
      481 slvtlgresr tlgsavplhl iypsvenvrt slegypasrr rrnrigfipi ftsgqltpqa
      541 aampchilrr t
//
LOCUS       XP_061012427             204 aa            linear   MAM 02-DEC-2023
DEFINITION  EF-hand calcium-binding domain-containing protein 11 isoform X1
            [Dama dama].
ACCESSION   XP_061012427
VERSION     XP_061012427.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156444.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..204
                     /product="EF-hand calcium-binding domain-containing
                     protein 11 isoform X1"
                     /calculated_mol_wt=23683
     Region          25..152
                     /region_name="PTZ00183"
                     /note="centrin; Provisional"
                     /db_xref="CDD:185503"
     CDS             1..204
                     /gene="EFCAB11"
                     /coded_by="XM_061156444.1:77..691"
                     /db_xref="GeneID:133065937"
ORIGIN      
        1 mfysqagarp rtwetsppeh kkwvevfkac dednkgylsr edfkvavvml fgykpskiea
       61 dsvmssvdpn tsgiqlkefl diirkkkeaq vycnevrhif tafdrhyrgy ltledfkkaf
      121 kqvapklser iilevfrevd qdsdghvsfk dfeyavnsgq kklaqecycs fihhhpklea
      181 akmffrrqvc kqnvvqpcng iiiq
//
LOCUS       XP_061012428             196 aa            linear   MAM 02-DEC-2023
DEFINITION  EF-hand calcium-binding domain-containing protein 11 isoform X2
            [Dama dama].
ACCESSION   XP_061012428
VERSION     XP_061012428.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156445.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..196
                     /product="EF-hand calcium-binding domain-containing
                     protein 11 isoform X2"
                     /calculated_mol_wt=22747
     Region          25..84
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cd00051"
                     /db_xref="CDD:238008"
     Site            order(31,33,35,42,68,70,72,78)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238008"
     CDS             1..196
                     /gene="EFCAB11"
                     /coded_by="XM_061156445.1:77..667"
                     /db_xref="GeneID:133065937"
ORIGIN      
        1 mfysqagarp rtwetsppeh kkwvevfkac dednkgylsr edfkvavvml fgykpskiea
       61 dsvmssvdpn tsgiqlkefl diirkkkeaq vycnevrhif tafdrhyrgy ltledfkkaf
      121 kqvapklser iilevfrflv phswfqmgvf sasgqhvkal irgeteteee pcsccpvyri
      181 ftvfagervf nrymse
//
LOCUS       XP_061012429             191 aa            linear   MAM 02-DEC-2023
DEFINITION  EF-hand calcium-binding domain-containing protein 11 isoform X3
            [Dama dama].
ACCESSION   XP_061012429
VERSION     XP_061012429.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156446.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..191
                     /product="EF-hand calcium-binding domain-containing
                     protein 11 isoform X3"
                     /calculated_mol_wt=21650
     Region          25..84
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cd00051"
                     /db_xref="CDD:238008"
     Site            order(31,33,35,42,68,70,72,78)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238008"
     Region          78..121
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cl08302"
                     /db_xref="CDD:415501"
     CDS             1..191
                     /gene="EFCAB11"
                     /coded_by="XM_061156446.1:77..652"
                     /db_xref="GeneID:133065937"
ORIGIN      
        1 mfysqagarp rtwetsppeh kkwvevfkac dednkgylsr edfkvavvml fgykpskiea
       61 dsvmssvdpn tsgiqlkefl diirkkkeaq vycnevrhif tafdrhyrgy ltledfkkaf
      121 kqvapklser iilevfrghg cdpslgnsrp gscgatrpvl ldhwasepql etvcvprrps
      181 crskgpaqpn k
//
LOCUS       XP_061012430             185 aa            linear   MAM 02-DEC-2023
DEFINITION  EF-hand calcium-binding domain-containing protein 11 isoform X4
            [Dama dama].
ACCESSION   XP_061012430
VERSION     XP_061012430.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156447.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..185
                     /product="EF-hand calcium-binding domain-containing
                     protein 11 isoform X4"
                     /calculated_mol_wt=21638
     Region          25..84
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cd00051"
                     /db_xref="CDD:238008"
     Site            order(31,33,35,42,68,70,72,78)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238008"
     Region          78..121
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cl08302"
                     /db_xref="CDD:415501"
     CDS             1..185
                     /gene="EFCAB11"
                     /coded_by="XM_061156447.1:77..634"
                     /db_xref="GeneID:133065937"
ORIGIN      
        1 mfysqagarp rtwetsppeh kkwvevfkac dednkgylsr edfkvavvml fgykpskiea
       61 dsvmssvdpn tsgiqlkefl diirkkkeaq vycnevrhif tafdrhyrgy ltledfkkaf
      121 kqvapklser iilevfsfqr aaevpaitpe fqtdrrkesr rwaslfkaih cffihprdrs
      181 lvprp
//
LOCUS       XP_061012431             174 aa            linear   MAM 02-DEC-2023
DEFINITION  EF-hand calcium-binding domain-containing protein 11 isoform X5
            [Dama dama].
ACCESSION   XP_061012431
VERSION     XP_061012431.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156448.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..174
                     /product="EF-hand calcium-binding domain-containing
                     protein 11 isoform X5"
                     /calculated_mol_wt=20167
     Region          25..152
                     /region_name="PTZ00183"
                     /note="centrin; Provisional"
                     /db_xref="CDD:185503"
     CDS             1..174
                     /gene="EFCAB11"
                     /coded_by="XM_061156448.1:77..601"
                     /db_xref="GeneID:133065937"
ORIGIN      
        1 mfysqagarp rtwetsppeh kkwvevfkac dednkgylsr edfkvavvml fgykpskiea
       61 dsvmssvdpn tsgiqlkefl diirkkkeaq vycnevrhif tafdrhyrgy ltledfkkaf
      121 kqvapklser iilevfrevd qdsdghvsfk dfeyavnsgq kvriwgsclr qkvp
//
LOCUS       XP_061012433             170 aa            linear   MAM 02-DEC-2023
DEFINITION  EF-hand calcium-binding domain-containing protein 11 isoform X6
            [Dama dama].
ACCESSION   XP_061012433
VERSION     XP_061012433.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156450.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..170
                     /product="EF-hand calcium-binding domain-containing
                     protein 11 isoform X6"
                     /calculated_mol_wt=19731
     Region          25..152
                     /region_name="PTZ00183"
                     /note="centrin; Provisional"
                     /db_xref="CDD:185503"
     CDS             1..170
                     /gene="EFCAB11"
                     /coded_by="XM_061156450.1:77..589"
                     /db_xref="GeneID:133065937"
ORIGIN      
        1 mfysqagarp rtwetsppeh kkwvevfkac dednkgylsr edfkvavvml fgykpskiea
       61 dsvmssvdpn tsgiqlkefl diirkkkeaq vycnevrhif tafdrhyrgy ltledfkkaf
      121 kqvapklser iilevfrevd qdsdghvsfk dfeyavnsgq krkphdldll
//
LOCUS       XP_061012434             168 aa            linear   MAM 02-DEC-2023
DEFINITION  EF-hand calcium-binding domain-containing protein 11 isoform X7
            [Dama dama].
ACCESSION   XP_061012434
VERSION     XP_061012434.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156451.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..168
                     /product="EF-hand calcium-binding domain-containing
                     protein 11 isoform X7"
                     /calculated_mol_wt=19387
     Region          25..152
                     /region_name="PTZ00183"
                     /note="centrin; Provisional"
                     /db_xref="CDD:185503"
     CDS             1..168
                     /gene="EFCAB11"
                     /coded_by="XM_061156451.1:77..583"
                     /db_xref="GeneID:133065937"
ORIGIN      
        1 mfysqagarp rtwetsppeh kkwvevfkac dednkgylsr edfkvavvml fgykpskiea
       61 dsvmssvdpn tsgiqlkefl diirkkkeaq vycnevrhif tafdrhyrgy ltledfkkaf
      121 kqvapklser iilevfrevd qdsdghvsfk dfeyavnsgq kgssqlrd
//
LOCUS       XP_061012435             166 aa            linear   MAM 02-DEC-2023
DEFINITION  EF-hand calcium-binding domain-containing protein 11 isoform X8
            [Dama dama].
ACCESSION   XP_061012435
VERSION     XP_061012435.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156452.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..166
                     /product="EF-hand calcium-binding domain-containing
                     protein 11 isoform X8"
                     /calculated_mol_wt=19054
     Region          24..>148
                     /region_name="EFh_PEF"
                     /note="The penta-EF hand (PEF) family; cl25352"
                     /db_xref="CDD:355382"
     Region          24..52
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320054"
     Region          25..84
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cd00051"
                     /db_xref="CDD:238008"
     Site            order(31,33,35,42,68,70,72,78)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238008"
     Site            order(35,42,68,70,72,78,104,106,108,115)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320054"
     Region          60..94
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320054"
     Region          95..124
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320054"
     CDS             1..166
                     /gene="EFCAB11"
                     /coded_by="XM_061156452.1:77..577"
                     /db_xref="GeneID:133065937"
ORIGIN      
        1 mfysqagarp rtwetsppeh kkwvevfkac dednkgylsr edfkvavvml fgykpskiea
       61 dsvmssvdpn tsgiqlkefl diirkkkeaq vycnevrhif tafdrhyrgy ltledfkkaf
      121 kqvapklser iilevfrfqg dfrggavakt lrsqcrgpgf dpwsgn
//
LOCUS       XP_061012436             161 aa            linear   MAM 02-DEC-2023
DEFINITION  EF-hand calcium-binding domain-containing protein 11 isoform X9
            [Dama dama].
ACCESSION   XP_061012436
VERSION     XP_061012436.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156453.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..161
                     /product="EF-hand calcium-binding domain-containing
                     protein 11 isoform X9"
                     /calculated_mol_wt=18643
     Region          25..152
                     /region_name="PTZ00183"
                     /note="centrin; Provisional"
                     /db_xref="CDD:185503"
     CDS             1..161
                     /gene="EFCAB11"
                     /coded_by="XM_061156453.1:77..562"
                     /db_xref="GeneID:133065937"
ORIGIN      
        1 mfysqagarp rtwetsppeh kkwvevfkac dednkgylsr edfkvavvml fgykpskiea
       61 dsvmssvdpn tsgiqlkefl diirkkkeaq vycnevrhif tafdrhyrgy ltledfkkaf
      121 kqvapklser iilevfrevd qdsdghvsfk dfeyavnsgq k
//
LOCUS       XP_061012437             154 aa            linear   MAM 02-DEC-2023
DEFINITION  EF-hand calcium-binding domain-containing protein 11 isoform X10
            [Dama dama].
ACCESSION   XP_061012437
VERSION     XP_061012437.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156454.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..154
                     /product="EF-hand calcium-binding domain-containing
                     protein 11 isoform X10"
                     /calculated_mol_wt=17723
     Region          25..84
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cd00051"
                     /db_xref="CDD:238008"
     Site            order(31,33,35,42,68,70,72,78)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238008"
     CDS             1..154
                     /gene="EFCAB11"
                     /coded_by="XM_061156454.1:77..541"
                     /db_xref="GeneID:133065937"
ORIGIN      
        1 mfysqagarp rtwetsppeh kkwvevfkac dednkgylsr edfkvavvml fgykpskiea
       61 dsvmssvdpn tsgiqlkefl diirkkkeaq vycnevrhif tafdrhyrgy ltledfkkaf
      121 kqvapklser iilevfrlst kelmllscgv geds
//
LOCUS       XP_061012438             153 aa            linear   MAM 02-DEC-2023
DEFINITION  EF-hand calcium-binding domain-containing protein 11 isoform X11
            [Dama dama].
ACCESSION   XP_061012438
VERSION     XP_061012438.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156455.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..153
                     /product="EF-hand calcium-binding domain-containing
                     protein 11 isoform X11"
                     /calculated_mol_wt=17985
     Region          25..84
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cd00051"
                     /db_xref="CDD:238008"
     Site            order(31,33,35,42,68,70,72,78)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238008"
     CDS             1..153
                     /gene="EFCAB11"
                     /coded_by="XM_061156455.1:77..538"
                     /db_xref="GeneID:133065937"
ORIGIN      
        1 mfysqagarp rtwetsppeh kkwvevfkac dednkgylsr edfkvavvml fgykpskiea
       61 dsvmssvdpn tsgiqlkefl diirkkkeaq vycnevrhif tafdrhyrgy ltledfkkaf
      121 kqvapklser iilevfrsrf rwcrkhpedv tli
//
LOCUS       XP_061012439             144 aa            linear   MAM 02-DEC-2023
DEFINITION  EF-hand calcium-binding domain-containing protein 11 isoform X12
            [Dama dama].
ACCESSION   XP_061012439
VERSION     XP_061012439.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156456.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..144
                     /product="EF-hand calcium-binding domain-containing
                     protein 11 isoform X12"
                     /calculated_mol_wt=16667
     Region          25..84
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cd00051"
                     /db_xref="CDD:238008"
     Site            order(31,33,35,42,68,70,72,78)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238008"
     Region          78..121
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cl08302"
                     /db_xref="CDD:415501"
     CDS             1..144
                     /gene="EFCAB11"
                     /coded_by="XM_061156456.1:77..511"
                     /db_xref="GeneID:133065937"
ORIGIN      
        1 mfysqagarp rtwetsppeh kkwvevfkac dednkgylsr edfkvavvml fgykpskiea
       61 dsvmssvdpn tsgiqlkefl diirkkkeaq vycnevrhif tafdrhyrgy ltledfkkaf
      121 kqvapklser iilevfrfcg plsc
//
LOCUS       XP_061012440             481 aa            linear   MAM 02-DEC-2023
DEFINITION  forkhead box protein N3 isoform X1 [Dama dama].
ACCESSION   XP_061012440
VERSION     XP_061012440.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156457.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..481
                     /product="forkhead box protein N3 isoform X1"
                     /calculated_mol_wt=51854
     Region          114..203
                     /region_name="FH_FOXN3"
                     /note="Forkhead (FH) domain found in Forkhead box protein
                     N3 (FOXN3); cd20059"
                     /db_xref="CDD:410833"
     Site            order(119,137..138,141,160..161,163..164,167,174,185..187,
                     189)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410833"
     CDS             1..481
                     /gene="FOXN3"
                     /coded_by="XM_061156457.1:468..1913"
                     /db_xref="GeneID:133065939"
ORIGIN      
        1 mgpvmppskk pessgisvss glspcyrgsg fskalqeddd ldfalpdirl eegamedeel
       61 tnlnwlhesk nllksfgdsv lrsvspvqdp ddepppspah sdvpydarqn pnckppysfs
      121 clifmaieds ptkrlpvkdi ynwilehfpy fanaptgwkn svrhnlslnk cfkkvdkers
      181 qsigkgslwc idpeyrqnli qalkktpyhp hsnvfntppa spqayqstsg pplwpgstff
      241 krngallqdp didaatamml lntppeiqag fppgviqngt rvlsrglfpg vrplpvtpig
      301 maavrnglpg crlrtesepa cgspvvsgdp kedhtyssak aaaarsaspa sdsvssssad
      361 epdefaakgg pegsegscps reshsepeed grprgpreap gdggpapahk krppaakark
      421 vpsdtlplkk rrtekppesd deemkeaags llhlagirsc lnnitnrtat gqkeqketak
      481 n
//
LOCUS       XP_061012441             481 aa            linear   MAM 02-DEC-2023
DEFINITION  forkhead box protein N3 isoform X1 [Dama dama].
ACCESSION   XP_061012441
VERSION     XP_061012441.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156458.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..481
                     /product="forkhead box protein N3 isoform X1"
                     /calculated_mol_wt=51854
     Region          114..203
                     /region_name="FH_FOXN3"
                     /note="Forkhead (FH) domain found in Forkhead box protein
                     N3 (FOXN3); cd20059"
                     /db_xref="CDD:410833"
     Site            order(119,137..138,141,160..161,163..164,167,174,185..187,
                     189)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410833"
     CDS             1..481
                     /gene="FOXN3"
                     /coded_by="XM_061156458.1:314..1759"
                     /db_xref="GeneID:133065939"
ORIGIN      
        1 mgpvmppskk pessgisvss glspcyrgsg fskalqeddd ldfalpdirl eegamedeel
       61 tnlnwlhesk nllksfgdsv lrsvspvqdp ddepppspah sdvpydarqn pnckppysfs
      121 clifmaieds ptkrlpvkdi ynwilehfpy fanaptgwkn svrhnlslnk cfkkvdkers
      181 qsigkgslwc idpeyrqnli qalkktpyhp hsnvfntppa spqayqstsg pplwpgstff
      241 krngallqdp didaatamml lntppeiqag fppgviqngt rvlsrglfpg vrplpvtpig
      301 maavrnglpg crlrtesepa cgspvvsgdp kedhtyssak aaaarsaspa sdsvssssad
      361 epdefaakgg pegsegscps reshsepeed grprgpreap gdggpapahk krppaakark
      421 vpsdtlplkk rrtekppesd deemkeaags llhlagirsc lnnitnrtat gqkeqketak
      481 n
//
LOCUS       XP_061012442             481 aa            linear   MAM 02-DEC-2023
DEFINITION  forkhead box protein N3 isoform X1 [Dama dama].
ACCESSION   XP_061012442
VERSION     XP_061012442.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156459.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..481
                     /product="forkhead box protein N3 isoform X1"
                     /calculated_mol_wt=51854
     Region          114..203
                     /region_name="FH_FOXN3"
                     /note="Forkhead (FH) domain found in Forkhead box protein
                     N3 (FOXN3); cd20059"
                     /db_xref="CDD:410833"
     Site            order(119,137..138,141,160..161,163..164,167,174,185..187,
                     189)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410833"
     CDS             1..481
                     /gene="FOXN3"
                     /coded_by="XM_061156459.1:189..1634"
                     /db_xref="GeneID:133065939"
ORIGIN      
        1 mgpvmppskk pessgisvss glspcyrgsg fskalqeddd ldfalpdirl eegamedeel
       61 tnlnwlhesk nllksfgdsv lrsvspvqdp ddepppspah sdvpydarqn pnckppysfs
      121 clifmaieds ptkrlpvkdi ynwilehfpy fanaptgwkn svrhnlslnk cfkkvdkers
      181 qsigkgslwc idpeyrqnli qalkktpyhp hsnvfntppa spqayqstsg pplwpgstff
      241 krngallqdp didaatamml lntppeiqag fppgviqngt rvlsrglfpg vrplpvtpig
      301 maavrnglpg crlrtesepa cgspvvsgdp kedhtyssak aaaarsaspa sdsvssssad
      361 epdefaakgg pegsegscps reshsepeed grprgpreap gdggpapahk krppaakark
      421 vpsdtlplkk rrtekppesd deemkeaags llhlagirsc lnnitnrtat gqkeqketak
      481 n
//
LOCUS       XP_061012443             481 aa            linear   MAM 02-DEC-2023
DEFINITION  forkhead box protein N3 isoform X1 [Dama dama].
ACCESSION   XP_061012443
VERSION     XP_061012443.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156460.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..481
                     /product="forkhead box protein N3 isoform X1"
                     /calculated_mol_wt=51854
     Region          114..203
                     /region_name="FH_FOXN3"
                     /note="Forkhead (FH) domain found in Forkhead box protein
                     N3 (FOXN3); cd20059"
                     /db_xref="CDD:410833"
     Site            order(119,137..138,141,160..161,163..164,167,174,185..187,
                     189)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410833"
     CDS             1..481
                     /gene="FOXN3"
                     /coded_by="XM_061156460.1:150..1595"
                     /db_xref="GeneID:133065939"
ORIGIN      
        1 mgpvmppskk pessgisvss glspcyrgsg fskalqeddd ldfalpdirl eegamedeel
       61 tnlnwlhesk nllksfgdsv lrsvspvqdp ddepppspah sdvpydarqn pnckppysfs
      121 clifmaieds ptkrlpvkdi ynwilehfpy fanaptgwkn svrhnlslnk cfkkvdkers
      181 qsigkgslwc idpeyrqnli qalkktpyhp hsnvfntppa spqayqstsg pplwpgstff
      241 krngallqdp didaatamml lntppeiqag fppgviqngt rvlsrglfpg vrplpvtpig
      301 maavrnglpg crlrtesepa cgspvvsgdp kedhtyssak aaaarsaspa sdsvssssad
      361 epdefaakgg pegsegscps reshsepeed grprgpreap gdggpapahk krppaakark
      421 vpsdtlplkk rrtekppesd deemkeaags llhlagirsc lnnitnrtat gqkeqketak
      481 n
//
LOCUS       XP_061012444             481 aa            linear   MAM 02-DEC-2023
DEFINITION  forkhead box protein N3 isoform X1 [Dama dama].
ACCESSION   XP_061012444
VERSION     XP_061012444.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156461.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..481
                     /product="forkhead box protein N3 isoform X1"
                     /calculated_mol_wt=51854
     Region          114..203
                     /region_name="FH_FOXN3"
                     /note="Forkhead (FH) domain found in Forkhead box protein
                     N3 (FOXN3); cd20059"
                     /db_xref="CDD:410833"
     Site            order(119,137..138,141,160..161,163..164,167,174,185..187,
                     189)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410833"
     CDS             1..481
                     /gene="FOXN3"
                     /coded_by="XM_061156461.1:532..1977"
                     /db_xref="GeneID:133065939"
ORIGIN      
        1 mgpvmppskk pessgisvss glspcyrgsg fskalqeddd ldfalpdirl eegamedeel
       61 tnlnwlhesk nllksfgdsv lrsvspvqdp ddepppspah sdvpydarqn pnckppysfs
      121 clifmaieds ptkrlpvkdi ynwilehfpy fanaptgwkn svrhnlslnk cfkkvdkers
      181 qsigkgslwc idpeyrqnli qalkktpyhp hsnvfntppa spqayqstsg pplwpgstff
      241 krngallqdp didaatamml lntppeiqag fppgviqngt rvlsrglfpg vrplpvtpig
      301 maavrnglpg crlrtesepa cgspvvsgdp kedhtyssak aaaarsaspa sdsvssssad
      361 epdefaakgg pegsegscps reshsepeed grprgpreap gdggpapahk krppaakark
      421 vpsdtlplkk rrtekppesd deemkeaags llhlagirsc lnnitnrtat gqkeqketak
      481 n
//
LOCUS       XP_061012445             481 aa            linear   MAM 02-DEC-2023
DEFINITION  forkhead box protein N3 isoform X1 [Dama dama].
ACCESSION   XP_061012445
VERSION     XP_061012445.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156462.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..481
                     /product="forkhead box protein N3 isoform X1"
                     /calculated_mol_wt=51854
     Region          114..203
                     /region_name="FH_FOXN3"
                     /note="Forkhead (FH) domain found in Forkhead box protein
                     N3 (FOXN3); cd20059"
                     /db_xref="CDD:410833"
     Site            order(119,137..138,141,160..161,163..164,167,174,185..187,
                     189)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410833"
     CDS             1..481
                     /gene="FOXN3"
                     /coded_by="XM_061156462.1:96..1541"
                     /db_xref="GeneID:133065939"
ORIGIN      
        1 mgpvmppskk pessgisvss glspcyrgsg fskalqeddd ldfalpdirl eegamedeel
       61 tnlnwlhesk nllksfgdsv lrsvspvqdp ddepppspah sdvpydarqn pnckppysfs
      121 clifmaieds ptkrlpvkdi ynwilehfpy fanaptgwkn svrhnlslnk cfkkvdkers
      181 qsigkgslwc idpeyrqnli qalkktpyhp hsnvfntppa spqayqstsg pplwpgstff
      241 krngallqdp didaatamml lntppeiqag fppgviqngt rvlsrglfpg vrplpvtpig
      301 maavrnglpg crlrtesepa cgspvvsgdp kedhtyssak aaaarsaspa sdsvssssad
      361 epdefaakgg pegsegscps reshsepeed grprgpreap gdggpapahk krppaakark
      421 vpsdtlplkk rrtekppesd deemkeaags llhlagirsc lnnitnrtat gqkeqketak
      481 n
//
LOCUS       XP_061012446             481 aa            linear   MAM 02-DEC-2023
DEFINITION  forkhead box protein N3 isoform X1 [Dama dama].
ACCESSION   XP_061012446
VERSION     XP_061012446.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156463.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..481
                     /product="forkhead box protein N3 isoform X1"
                     /calculated_mol_wt=51854
     Region          114..203
                     /region_name="FH_FOXN3"
                     /note="Forkhead (FH) domain found in Forkhead box protein
                     N3 (FOXN3); cd20059"
                     /db_xref="CDD:410833"
     Site            order(119,137..138,141,160..161,163..164,167,174,185..187,
                     189)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410833"
     CDS             1..481
                     /gene="FOXN3"
                     /coded_by="XM_061156463.1:254..1699"
                     /db_xref="GeneID:133065939"
ORIGIN      
        1 mgpvmppskk pessgisvss glspcyrgsg fskalqeddd ldfalpdirl eegamedeel
       61 tnlnwlhesk nllksfgdsv lrsvspvqdp ddepppspah sdvpydarqn pnckppysfs
      121 clifmaieds ptkrlpvkdi ynwilehfpy fanaptgwkn svrhnlslnk cfkkvdkers
      181 qsigkgslwc idpeyrqnli qalkktpyhp hsnvfntppa spqayqstsg pplwpgstff
      241 krngallqdp didaatamml lntppeiqag fppgviqngt rvlsrglfpg vrplpvtpig
      301 maavrnglpg crlrtesepa cgspvvsgdp kedhtyssak aaaarsaspa sdsvssssad
      361 epdefaakgg pegsegscps reshsepeed grprgpreap gdggpapahk krppaakark
      421 vpsdtlplkk rrtekppesd deemkeaags llhlagirsc lnnitnrtat gqkeqketak
      481 n
//
LOCUS       XP_061012447             481 aa            linear   MAM 02-DEC-2023
DEFINITION  forkhead box protein N3 isoform X1 [Dama dama].
ACCESSION   XP_061012447
VERSION     XP_061012447.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156464.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..481
                     /product="forkhead box protein N3 isoform X1"
                     /calculated_mol_wt=51854
     Region          114..203
                     /region_name="FH_FOXN3"
                     /note="Forkhead (FH) domain found in Forkhead box protein
                     N3 (FOXN3); cd20059"
                     /db_xref="CDD:410833"
     Site            order(119,137..138,141,160..161,163..164,167,174,185..187,
                     189)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410833"
     CDS             1..481
                     /gene="FOXN3"
                     /coded_by="XM_061156464.1:151..1596"
                     /db_xref="GeneID:133065939"
ORIGIN      
        1 mgpvmppskk pessgisvss glspcyrgsg fskalqeddd ldfalpdirl eegamedeel
       61 tnlnwlhesk nllksfgdsv lrsvspvqdp ddepppspah sdvpydarqn pnckppysfs
      121 clifmaieds ptkrlpvkdi ynwilehfpy fanaptgwkn svrhnlslnk cfkkvdkers
      181 qsigkgslwc idpeyrqnli qalkktpyhp hsnvfntppa spqayqstsg pplwpgstff
      241 krngallqdp didaatamml lntppeiqag fppgviqngt rvlsrglfpg vrplpvtpig
      301 maavrnglpg crlrtesepa cgspvvsgdp kedhtyssak aaaarsaspa sdsvssssad
      361 epdefaakgg pegsegscps reshsepeed grprgpreap gdggpapahk krppaakark
      421 vpsdtlplkk rrtekppesd deemkeaags llhlagirsc lnnitnrtat gqkeqketak
      481 n
//
LOCUS       XP_061012449             481 aa            linear   MAM 02-DEC-2023
DEFINITION  forkhead box protein N3 isoform X1 [Dama dama].
ACCESSION   XP_061012449
VERSION     XP_061012449.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156466.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..481
                     /product="forkhead box protein N3 isoform X1"
                     /calculated_mol_wt=51854
     Region          114..203
                     /region_name="FH_FOXN3"
                     /note="Forkhead (FH) domain found in Forkhead box protein
                     N3 (FOXN3); cd20059"
                     /db_xref="CDD:410833"
     Site            order(119,137..138,141,160..161,163..164,167,174,185..187,
                     189)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410833"
     CDS             1..481
                     /gene="FOXN3"
                     /coded_by="XM_061156466.1:38..1483"
                     /db_xref="GeneID:133065939"
ORIGIN      
        1 mgpvmppskk pessgisvss glspcyrgsg fskalqeddd ldfalpdirl eegamedeel
       61 tnlnwlhesk nllksfgdsv lrsvspvqdp ddepppspah sdvpydarqn pnckppysfs
      121 clifmaieds ptkrlpvkdi ynwilehfpy fanaptgwkn svrhnlslnk cfkkvdkers
      181 qsigkgslwc idpeyrqnli qalkktpyhp hsnvfntppa spqayqstsg pplwpgstff
      241 krngallqdp didaatamml lntppeiqag fppgviqngt rvlsrglfpg vrplpvtpig
      301 maavrnglpg crlrtesepa cgspvvsgdp kedhtyssak aaaarsaspa sdsvssssad
      361 epdefaakgg pegsegscps reshsepeed grprgpreap gdggpapahk krppaakark
      421 vpsdtlplkk rrtekppesd deemkeaags llhlagirsc lnnitnrtat gqkeqketak
      481 n
//
LOCUS       XP_061012450             481 aa            linear   MAM 02-DEC-2023
DEFINITION  forkhead box protein N3 isoform X1 [Dama dama].
ACCESSION   XP_061012450
VERSION     XP_061012450.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156467.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..481
                     /product="forkhead box protein N3 isoform X1"
                     /calculated_mol_wt=51854
     Region          114..203
                     /region_name="FH_FOXN3"
                     /note="Forkhead (FH) domain found in Forkhead box protein
                     N3 (FOXN3); cd20059"
                     /db_xref="CDD:410833"
     Site            order(119,137..138,141,160..161,163..164,167,174,185..187,
                     189)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410833"
     CDS             1..481
                     /gene="FOXN3"
                     /coded_by="XM_061156467.1:103..1548"
                     /db_xref="GeneID:133065939"
ORIGIN      
        1 mgpvmppskk pessgisvss glspcyrgsg fskalqeddd ldfalpdirl eegamedeel
       61 tnlnwlhesk nllksfgdsv lrsvspvqdp ddepppspah sdvpydarqn pnckppysfs
      121 clifmaieds ptkrlpvkdi ynwilehfpy fanaptgwkn svrhnlslnk cfkkvdkers
      181 qsigkgslwc idpeyrqnli qalkktpyhp hsnvfntppa spqayqstsg pplwpgstff
      241 krngallqdp didaatamml lntppeiqag fppgviqngt rvlsrglfpg vrplpvtpig
      301 maavrnglpg crlrtesepa cgspvvsgdp kedhtyssak aaaarsaspa sdsvssssad
      361 epdefaakgg pegsegscps reshsepeed grprgpreap gdggpapahk krppaakark
      421 vpsdtlplkk rrtekppesd deemkeaags llhlagirsc lnnitnrtat gqkeqketak
      481 n
//
LOCUS       XP_061012451             480 aa            linear   MAM 02-DEC-2023
DEFINITION  forkhead box protein N3 isoform X2 [Dama dama].
ACCESSION   XP_061012451
VERSION     XP_061012451.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156468.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..480
                     /product="forkhead box protein N3 isoform X2"
                     /calculated_mol_wt=51749
     Region          114..203
                     /region_name="FH_FOXN3"
                     /note="Forkhead (FH) domain found in Forkhead box protein
                     N3 (FOXN3); cd20059"
                     /db_xref="CDD:410833"
     Site            order(119,137..138,141,160..161,163..164,167,174,185..187,
                     189)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410833"
     CDS             1..480
                     /gene="FOXN3"
                     /coded_by="XM_061156468.1:468..1910"
                     /db_xref="GeneID:133065939"
ORIGIN      
        1 mgpvmppskk pessgisvss glspcyrgsg fskalqeddd ldfalpdirl eegamedeel
       61 tnlnwlhesk nllksfgdsv lrsvspvqdp ddepppspah sdvpydarqn pnckppysfs
      121 clifmaieds ptkrlpvkdi ynwilehfpy fanaptgwkn svrhnlslnk cfkkvdkers
      181 qsigkgslwc idpeyrqnli qalkktpyhp hsnvfntppa spqayqstsg pplwpgstff
      241 krngallqdp didaatamml lntppeiqav ppgviqngtr vlsrglfpgv rplpvtpigm
      301 aavrnglpgc rlrtesepac gspvvsgdpk edhtyssaka aaarsaspas dsvssssade
      361 pdefaakggp egsegscpsr eshsepeedg rprgpreapg dggpapahkk rppaakarkv
      421 psdtlplkkr rtekppesdd eemkeaagsl lhlagirscl nnitnrtatg qkeqketakn
//
LOCUS       XP_061012452             459 aa            linear   MAM 02-DEC-2023
DEFINITION  forkhead box protein N3 isoform X3 [Dama dama].
ACCESSION   XP_061012452
VERSION     XP_061012452.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156469.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..459
                     /product="forkhead box protein N3 isoform X3"
                     /calculated_mol_wt=49540
     Region          114..203
                     /region_name="FH_FOXN3"
                     /note="Forkhead (FH) domain found in Forkhead box protein
                     N3 (FOXN3); cd20059"
                     /db_xref="CDD:410833"
     Site            order(119,137..138,141,160..161,163..164,167,174,185..187,
                     189)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410833"
     CDS             1..459
                     /gene="FOXN3"
                     /coded_by="XM_061156469.1:468..1847"
                     /db_xref="GeneID:133065939"
ORIGIN      
        1 mgpvmppskk pessgisvss glspcyrgsg fskalqeddd ldfalpdirl eegamedeel
       61 tnlnwlhesk nllksfgdsv lrsvspvqdp ddepppspah sdvpydarqn pnckppysfs
      121 clifmaieds ptkrlpvkdi ynwilehfpy fanaptgwkn svrhnlslnk cfkkvdkers
      181 qsigkgslwc idpeyrqnli qalkktpyhp hsnvfntppa spqayqstsg pplwpgstff
      241 krngallqvp pgviqngtrv lsrglfpgvr plpvtpigma avrnglpgcr lrtesepacg
      301 spvvsgdpke dhtyssakaa aarsaspasd svssssadep defaakggpe gsegscpsre
      361 shsepeedgr prgpreapgd ggpapahkkr ppaakarkvp sdtlplkkrr tekppesdde
      421 emkeaagsll hlagirscln nitnrtatgq keqketakn
//
LOCUS       XP_061012453             505 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 8 isoform X1 [Dama dama].
ACCESSION   XP_061012453
VERSION     XP_061012453.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156470.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..505
                     /product="tetratricopeptide repeat protein 8 isoform X1"
                     /calculated_mol_wt=56907
     Region          26..165
                     /region_name="TTC8_N"
                     /note="N-terminal domain of tetratricopeptide repeat
                     domain 8; cd21341"
                     /db_xref="CDD:411061"
     Region          216..450
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Site            order(216,219..220,222,245,248..249,252..253,255..256,279,
                     282..283,286..287,290)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          216..239
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          243..273
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          278..306
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          312..340
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          348..374
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(350..351,354..355,357,384,387..388,391..392,
                     394..395,418,421..422,425..426,429)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          379..412
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          417..443
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..505
                     /gene="TTC8"
                     /coded_by="XM_061156470.1:33..1550"
                     /db_xref="GeneID:133065942"
ORIGIN      
        1 meplflawsy frrrrfqlca dlctqileks pcdqaawilk araltemvyv deididqngi
       61 aemmldenai aqvprpgtsl klpgtnqtgg psptvrpitq agrpitgclr sgtqsgrpgt
      121 leqairmprt aytarpiass sgrfvrlgta smltspdgpf inlsrlnltk yaqkpklaka
      181 lfeyifhhen dvktaldlaa lstehsqykd wwwkvqlgkc yhrlrlyrea ekqfksalke
      241 qemvdtflyl akvyisldqp vtainlfkqg lnkfpgevtl lygiariyek mnntssaaey
      301 ykevlkqdnt hvgaivfigi dhfyaeqpev alrffrrvlq mgvyncplfn nlglccfyaq
      361 qydmtltsfe ralslaedee evaavwynlg hiavgvgdmn lahqcfrlal vsdnsfaeay
      421 nnlavlemrr ghveqakall qtasslipnl yephfnfati sdqvlilwsy sgllfltdwr
      481 steelcccse vcgsissshg httln
//
LOCUS       XP_061012454             501 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 8 isoform X2 [Dama dama].
ACCESSION   XP_061012454
VERSION     XP_061012454.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156471.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..501
                     /product="tetratricopeptide repeat protein 8 isoform X2"
                     /calculated_mol_wt=56514
     Region          26..165
                     /region_name="TTC8_N"
                     /note="N-terminal domain of tetratricopeptide repeat
                     domain 8; cd21341"
                     /db_xref="CDD:411061"
     Region          171..308
                     /region_name="TadD"
                     /note="Flp pilus assembly protein TadD, contains TPR
                     repeats [Intracellular trafficking, secretion, and
                     vesicular transport, Extracellular structures]; COG5010"
                     /db_xref="CDD:444034"
     Site            order(216,219..220,222,245,248..249,252..253,255..256,279,
                     282..283,286..287,290)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          216..239
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          243..273
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          247..497
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          278..306
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          312..340
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          348..374
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(350..351,354..355,357,384,387..388,391..392,
                     394..395,418,421..422,425..426,429)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          379..412
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          417..443
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          451..476
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..501
                     /gene="TTC8"
                     /coded_by="XM_061156471.1:33..1538"
                     /db_xref="GeneID:133065942"
ORIGIN      
        1 meplflawsy frrrrfqlca dlctqileks pcdqaawilk araltemvyv deididqngi
       61 aemmldenai aqvprpgtsl klpgtnqtgg psptvrpitq agrpitgclr sgtqsgrpgt
      121 leqairmprt aytarpiass sgrfvrlgta smltspdgpf inlsrlnltk yaqkpklaka
      181 lfeyifhhen dvktaldlaa lstehsqykd wwwkvqlgkc yhrlrlyrea ekqfksalke
      241 qemvdtflyl akvyisldqp vtainlfkqg lnkfpgevtl lygiariyek mnntssaaey
      301 ykevlkqdnt hvgaivfigi dhfyaeqpev alrffrrvlq mgvyncplfn nlglccfyaq
      361 qydmtltsfe ralslaedee evaavwynlg hiavgvgdmn lahqcfrlal vsdnsfaeay
      421 nnlavlemrr ghveqakall qtasslipnl yephfnfati sdqigdlqrs yvaaqksaaa
      481 fpahmdtqrl ieqlkqhfat l
//
LOCUS       XP_061012455            1969 aa            linear   MAM 02-DEC-2023
DEFINITION  echinoderm microtubule-associated protein-like 5 isoform X1 [Dama
            dama].
ACCESSION   XP_061012455
VERSION     XP_061012455.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156472.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1969
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1969
                     /product="echinoderm microtubule-associated protein-like 5
                     isoform X1"
                     /calculated_mol_wt=219052
     Region          <2..49
                     /region_name="HELP"
                     /note="HELP motif; pfam03451"
                     /db_xref="CDD:460922"
     Region          58..438
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          64..104
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          110..148
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          153..201
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          203..233
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          240..273
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          286..321
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          321..802
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(323,342,346,352..353,402..403,425,429,435..436,467,
                     472,478..479,496,534,539,545..546,561..562,580,585,591,
                     628,725..726,743,750,756..757,769,771,789,793,801..802)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          328..352
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          370..406
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          411..451
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          454..494
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          521..560
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <672..715
                     /region_name="HELP"
                     /note="HELP motif; pfam03451"
                     /db_xref="CDD:460922"
     Region          720..1112
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          730..769
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          775..814
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          819..861
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          867..900
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          906..940
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          961..994
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1001..1025
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1043..1078
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1085..1112
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1196..1235
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <1355..1402
                     /region_name="HELP"
                     /note="HELP motif; pfam03451"
                     /db_xref="CDD:460922"
     Region          1418..1467
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1420..1807
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          1472..1514
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1519..1555
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1605..1690
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1689..1962
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          1697..1735
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1780..1813
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1826..1884
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1892..1931
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..1969
                     /gene="EML5"
                     /coded_by="XM_061156472.1:1..5910"
                     /db_xref="GeneID:133065943"
ORIGIN      
        1 maarsapsch lrlewvygyr ghqcrnnlyy taakeivyfv agvgvvyspr ehrqkfyrgh
       61 sddiislalh pervlvatgq vgkepyiciw dsytvqtvsv lkdvhthgva clafdldgqr
      121 lvsvgldskn avcvwdwkrg kmlsmapght drifdiswdl yqpnklvscg vkhikfwslc
      181 gnaltpkrgv fgktgdlqti lclacardel tysgalngdi yvwkginlir tiqgahtagi
      241 fsmnaceegf atggrdgcir lwdltfkpit vidlreadqg ykglsvrsvc wrgdhilvgt
      301 qdseifeivv hernrpflim qghcegelwa laihptkpla vtgsddrsvr iwslvdhali
      361 arcnmeepir caavnvdgih lalgmkdgsl tvlrvrdmte vvhikdrkea ihelkyspdg
      421 tylavgcnds svdiygvaqr ykkfgecvgs lsfithldws sdsrylqtnd gngkrlfyrm
      481 pggkevanke eikgvhwasw tcvsglevng iwpkysdvnd insvdgnyig qvlvtaddyg
      541 ivklfrypcl rkgakfkkyi ghsahvtnvr wshdyqwvis iggadhsvfq wkfiperklk
      601 dalhiapqes ladsnsdesd sdlsdvpeld seieqetqlt yrrqvykedl phlkeqykek
      661 qksgtskrre rapgnsirlh fvhgyrgydc rsnlfytqtg eivyhvaavg vvynrqqntq
      721 rfylghdddv lclavhpvrd lvatgqvgrd psihiwdtet tkplsilkgy hqygvcavdf
      781 sadgrrlasa glddghtvvl wdwkrgerls vtrgskdkif vvkmnpyvpd klmtagikhi
      841 kfwrragggl igrkgyigtl gkndtmmsav ygwteemafs gtstgdvciw rdiflvktvk
      901 ahdgpvfsmh alekgfvtgg kdgvvalwdd sferclktya ikraalapgs kglllednps
      961 iraislghgh ilvgtkngei levdksgpit llvqghmege vwglathpyl picatvsddk
     1021 tlriwdlsps hcmlavrklk kggrcccfsp dgkalavgln dgsflmanad tledlvsfhh
     1081 rkdiisdirf spgsgkylav ashdsfidiy nvmsskrvgi ckgatsyith vdwdirgkll
     1141 qvntgakeql ffeaprgkkq tipsgeaeki gwaswtsvlg lccegiwpvi gevmdvtasc
     1201 ltsdktvlat gddlgfvklf rypakgkfgk fkryvahsth vtnvrwtydd smlvtlggad
     1261 mslmvwtnem egyrekrpcd seesdidsee dggydsdvtr eneisytira lstnirpmfg
     1321 ikphlqqkep stderppvsr appqpeklqt nnvgkkkrpi edlvlelvfg yrgrdcrnnv
     1381 hylndgddii yhtasvgilh nvatgtqsfy qehnddilcl tvnqhpkfin ivatgqvgds
     1441 admsatapsv hvwdavnkqt lsilrcyhsk gvcsvsfsat gklllsvgld pehtvtiwrw
     1501 qegakiasra ghnqrifvae frpdsdsqfv svgvkhvkfw tlagrallsk kgllsaleda
     1561 rmqtmlavaf gannltftgt vsgdvcvwkd hvlcrivara hngpvfamyt tlrdglivtg
     1621 gkerpskegg avklwdqelr rcrafrletg qasdcvrsvc rgkgkilvgt rnaeiievge
     1681 knaacnvlvn ghmdgpvwgl athpsrdffl saaedgtvrl wdiadrkmln kvnlghaart
     1741 vcyspegdmv aigmkngefi illvsslkiw gkkrdrrcai hdirfspdsr flavgssens
     1801 vdfydltlgp tlnrisyckd ipsfvlqmdf sadgrhlqvs tgcykrhvye vpsgkhlmdq
     1861 aaidritwat wtsilgdevm giwsrhaeka dvscacvshs gislvtgddf gmvklfdfpc
     1921 pekfakhkrf lghsphvtni rftsgdrhvi saggddcslf vwkcvhmph
//
LOCUS       XP_061012456            1931 aa            linear   MAM 02-DEC-2023
DEFINITION  echinoderm microtubule-associated protein-like 5 isoform X2 [Dama
            dama].
ACCESSION   XP_061012456
VERSION     XP_061012456.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156473.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1931
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1931
                     /product="echinoderm microtubule-associated protein-like 5
                     isoform X2"
                     /calculated_mol_wt=215125
     Region          <2..49
                     /region_name="HELP"
                     /note="HELP motif; pfam03451"
                     /db_xref="CDD:460922"
     Region          58..438
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          64..104
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          110..148
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          153..201
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          203..233
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          240..273
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          286..321
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          321..802
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(323,342,346,352..353,402..403,425,429,435..436,467,
                     472,478..479,496,534,539,545..546,561..562,580,585,591,
                     628,725..726,743,750,756..757,769,771,789,793,801..802)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          328..352
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          370..406
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          411..451
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          454..494
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          521..560
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <672..715
                     /region_name="HELP"
                     /note="HELP motif; pfam03451"
                     /db_xref="CDD:460922"
     Region          720..1074
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          730..769
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          775..814
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          819..862
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          869..956
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          963..997
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1005..1031
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1047..1072
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <1317..1364
                     /region_name="HELP"
                     /note="HELP motif; pfam03451"
                     /db_xref="CDD:460922"
     Region          1380..1429
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1382..1769
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          1434..1476
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1481..1517
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1567..1652
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1651..1924
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          1659..1697
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1742..1775
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1788..1846
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1854..1893
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..1931
                     /gene="EML5"
                     /coded_by="XM_061156473.1:1..5796"
                     /db_xref="GeneID:133065943"
ORIGIN      
        1 maarsapsch lrlewvygyr ghqcrnnlyy taakeivyfv agvgvvyspr ehrqkfyrgh
       61 sddiislalh pervlvatgq vgkepyiciw dsytvqtvsv lkdvhthgva clafdldgqr
      121 lvsvgldskn avcvwdwkrg kmlsmapght drifdiswdl yqpnklvscg vkhikfwslc
      181 gnaltpkrgv fgktgdlqti lclacardel tysgalngdi yvwkginlir tiqgahtagi
      241 fsmnaceegf atggrdgcir lwdltfkpit vidlreadqg ykglsvrsvc wrgdhilvgt
      301 qdseifeivv hernrpflim qghcegelwa laihptkpla vtgsddrsvr iwslvdhali
      361 arcnmeepir caavnvdgih lalgmkdgsl tvlrvrdmte vvhikdrkea ihelkyspdg
      421 tylavgcnds svdiygvaqr ykkfgecvgs lsfithldws sdsrylqtnd gngkrlfyrm
      481 pggkevanke eikgvhwasw tcvsglevng iwpkysdvnd insvdgnyig qvlvtaddyg
      541 ivklfrypcl rkgakfkkyi ghsahvtnvr wshdyqwvis iggadhsvfq wkfiperklk
      601 dalhiapqes ladsnsdesd sdlsdvpeld seieqetqlt yrrqvykedl phlkeqykek
      661 qksgtskrre rapgnsirlh fvhgyrgydc rsnlfytqtg eivyhvaavg vvynrqqntq
      721 rfylghdddv lclavhpvrd lvatgqvgrd psihiwdtet tkplsilkgy hqygvcavdf
      781 sadgrrlasa glddghtvvl wdwkrgerls vtrgskdkif vvkmnpyvpd klmtagikhi
      841 kfwrragdvc iwrdiflvkt vkahdgpvfs mhalekgfvt ggkdgvvalw ddsferclkt
      901 yaikraalap gskgllledn psiraislgh ghilvgtkng eilevdksgp itllvqghme
      961 gevwglathp ylpicatvsd dktlriwdls pshcmlavrk lkkggrcccf spdgkalavg
     1021 lndgsflman adtledlvsf hhrkdiisdi rfspgsgkyl avashdsfid iynvmsskrv
     1081 gickgatsyi thvdwdirgk llqvntgake qlffeaprgk kqtipsgeae kigwaswtsv
     1141 lglccegiwp vigevmdvta scltsdktvl atgddlgfvk lfrypakgkf gkfkryvahs
     1201 thvtnvrwty ddsmlvtlgg admslmvwtn emegyrekrp cdseesdids eedggydsdv
     1261 treneisyti ralstnirpm fgikphlqqk epstderppv srappqpekl qtnnvgkkkr
     1321 piedlvlelv fgyrgrdcrn nvhylndgdd iiyhtasvgi lhnvatgtqs fyqehnddil
     1381 cltvnqhpkf inivatgqvg dsadmsatap svhvwdavnk qtlsilrcyh skgvcsvsfs
     1441 atgklllsvg ldpehtvtiw rwqegakias raghnqrifv aefrpdsdsq fvsvgvkhvk
     1501 fwtlagrall skkgllsale darmqtmlav afgannltft gtvsgdvcvw kdhvlcriva
     1561 rahngpvfam yttlrdgliv tggkerpske ggavklwdqe lrrcrafrle tgqasdcvrs
     1621 vcrgkgkilv gtrnaeiiev geknaacnvl vnghmdgpvw glathpsrdf flsaaedgtv
     1681 rlwdiadrkm lnkvnlghaa rtvcyspegd mvaigmknge fiillvsslk iwgkkrdrrc
     1741 aihdirfspd srflavgsse nsvdfydltl gptlnrisyc kdipsfvlqm dfsadgrhlq
     1801 vstgcykrhv yevpsgkhlm dqaaidritw atwtsilgde vmgiwsrhae kadvscacvs
     1861 hsgislvtgd dfgmvklfdf pcpekfakhk rflghsphvt nirftsgdrh visaggddcs
     1921 lfvwkcvhmp h
//
LOCUS       XP_061012457            1883 aa            linear   MAM 02-DEC-2023
DEFINITION  echinoderm microtubule-associated protein-like 5 isoform X3 [Dama
            dama].
ACCESSION   XP_061012457
VERSION     XP_061012457.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156474.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1883
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1883
                     /product="echinoderm microtubule-associated protein-like 5
                     isoform X3"
                     /calculated_mol_wt=209533
     Region          <2..49
                     /region_name="HELP"
                     /note="HELP motif; pfam03451"
                     /db_xref="CDD:460922"
     Region          58..438
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          64..104
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          110..148
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          153..201
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          203..233
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          240..273
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          286..321
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          321..802
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(323,342,346,352..353,402..403,425,429,435..436,467,
                     472,478..479,496,534,539,545..546,561..562,580,585,591,
                     628,725..726,743,750,756..757,769,771,789,793,801..802)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          328..352
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          370..406
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          411..451
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          454..494
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          521..560
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <672..715
                     /region_name="HELP"
                     /note="HELP motif; pfam03451"
                     /db_xref="CDD:460922"
     Region          720..1112
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          730..769
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          775..814
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          819..861
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          867..900
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          906..940
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          961..994
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1001..1025
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1043..1078
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1085..1112
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1196..1235
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <1355..1402
                     /region_name="HELP"
                     /note="HELP motif; pfam03451"
                     /db_xref="CDD:460922"
     Region          1418..1467
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1420..1807
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          1472..1514
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1519..1555
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1605..1690
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1698..1733
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1777..>1876
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          1780..1818
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1851..1878
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..1883
                     /gene="EML5"
                     /coded_by="XM_061156474.1:1..5652"
                     /db_xref="GeneID:133065943"
ORIGIN      
        1 maarsapsch lrlewvygyr ghqcrnnlyy taakeivyfv agvgvvyspr ehrqkfyrgh
       61 sddiislalh pervlvatgq vgkepyiciw dsytvqtvsv lkdvhthgva clafdldgqr
      121 lvsvgldskn avcvwdwkrg kmlsmapght drifdiswdl yqpnklvscg vkhikfwslc
      181 gnaltpkrgv fgktgdlqti lclacardel tysgalngdi yvwkginlir tiqgahtagi
      241 fsmnaceegf atggrdgcir lwdltfkpit vidlreadqg ykglsvrsvc wrgdhilvgt
      301 qdseifeivv hernrpflim qghcegelwa laihptkpla vtgsddrsvr iwslvdhali
      361 arcnmeepir caavnvdgih lalgmkdgsl tvlrvrdmte vvhikdrkea ihelkyspdg
      421 tylavgcnds svdiygvaqr ykkfgecvgs lsfithldws sdsrylqtnd gngkrlfyrm
      481 pggkevanke eikgvhwasw tcvsglevng iwpkysdvnd insvdgnyig qvlvtaddyg
      541 ivklfrypcl rkgakfkkyi ghsahvtnvr wshdyqwvis iggadhsvfq wkfiperklk
      601 dalhiapqes ladsnsdesd sdlsdvpeld seieqetqlt yrrqvykedl phlkeqykek
      661 qksgtskrre rapgnsirlh fvhgyrgydc rsnlfytqtg eivyhvaavg vvynrqqntq
      721 rfylghdddv lclavhpvrd lvatgqvgrd psihiwdtet tkplsilkgy hqygvcavdf
      781 sadgrrlasa glddghtvvl wdwkrgerls vtrgskdkif vvkmnpyvpd klmtagikhi
      841 kfwrragggl igrkgyigtl gkndtmmsav ygwteemafs gtstgdvciw rdiflvktvk
      901 ahdgpvfsmh alekgfvtgg kdgvvalwdd sferclktya ikraalapgs kglllednps
      961 iraislghgh ilvgtkngei levdksgpit llvqghmege vwglathpyl picatvsddk
     1021 tlriwdlsps hcmlavrklk kggrcccfsp dgkalavgln dgsflmanad tledlvsfhh
     1081 rkdiisdirf spgsgkylav ashdsfidiy nvmsskrvgi ckgatsyith vdwdirgkll
     1141 qvntgakeql ffeaprgkkq tipsgeaeki gwaswtsvlg lccegiwpvi gevmdvtasc
     1201 ltsdktvlat gddlgfvklf rypakgkfgk fkryvahsth vtnvrwtydd smlvtlggad
     1261 mslmvwtnem egyrekrpcd seesdidsee dggydsdvtr eneisytira lstnirpmfg
     1321 ikphlqqkep stderppvsr appqpeklqt nnvgkkkrpi edlvlelvfg yrgrdcrnnv
     1381 hylndgddii yhtasvgilh nvatgtqsfy qehnddilcl tvnqhpkfin ivatgqvgds
     1441 admsatapsv hvwdavnkqt lsilrcyhsk gvcsvsfsat gklllsvgld pehtvtiwrw
     1501 qegakiasra ghnqrifvae frpdsdsqfv svgvkhvkfw tlagrallsk kgllsaleda
     1561 rmqtmlavaf gannltftgt vsgdvcvwkd hvlcrivara hngpvfamyt tlrdglivtg
     1621 gkerpskegg avklwdqelr rcrafrletg qasdcvrsvc rgkgkilvgt rnaeiievge
     1681 knaacnvlvn ghmdgpvwgl athpsrdffl saaedgtvrl wdiadrkmln kvnlghaart
     1741 vcyspegdmv aigmkngefi illvsslkiw gkkrdrrcai hdirfspdsr flavgssens
     1801 vdfydltlgp tlnrisyckd ipsfvlqmdf sadgrhlqak hkrflghsph vtnirftsgd
     1861 rhvisaggdd cslfvwkcvh mph
//
LOCUS       XP_061012458            1629 aa            linear   MAM 02-DEC-2023
DEFINITION  echinoderm microtubule-associated protein-like 5 isoform X4 [Dama
            dama].
ACCESSION   XP_061012458
VERSION     XP_061012458.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156475.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1629
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1629
                     /product="echinoderm microtubule-associated protein-like 5
                     isoform X4"
                     /calculated_mol_wt=181402
     Region          <2..49
                     /region_name="HELP"
                     /note="HELP motif; pfam03451"
                     /db_xref="CDD:460922"
     Region          58..438
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          64..104
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          110..148
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          153..201
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          203..233
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          240..273
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          286..321
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          321..802
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(323,342,346,352..353,402..403,425,429,435..436,467,
                     472,478..479,496,534,539,545..546,561..562,580,585,591,
                     628,725..726,743,750,756..757,769,771,789,793,801..802)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          328..352
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          370..406
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          411..451
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          454..494
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          521..560
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <672..715
                     /region_name="HELP"
                     /note="HELP motif; pfam03451"
                     /db_xref="CDD:460922"
     Region          720..1112
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          730..769
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          775..814
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          819..861
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          867..900
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          906..940
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          943..1501
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          961..994
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1001..1025
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1043..1078
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1085..1112
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1196..1235
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1430..1465
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <1449..>1629
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          1472..1510
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1518..1556
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1563..1588
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..1629
                     /gene="EML5"
                     /coded_by="XM_061156475.1:1..4890"
                     /db_xref="GeneID:133065943"
ORIGIN      
        1 maarsapsch lrlewvygyr ghqcrnnlyy taakeivyfv agvgvvyspr ehrqkfyrgh
       61 sddiislalh pervlvatgq vgkepyiciw dsytvqtvsv lkdvhthgva clafdldgqr
      121 lvsvgldskn avcvwdwkrg kmlsmapght drifdiswdl yqpnklvscg vkhikfwslc
      181 gnaltpkrgv fgktgdlqti lclacardel tysgalngdi yvwkginlir tiqgahtagi
      241 fsmnaceegf atggrdgcir lwdltfkpit vidlreadqg ykglsvrsvc wrgdhilvgt
      301 qdseifeivv hernrpflim qghcegelwa laihptkpla vtgsddrsvr iwslvdhali
      361 arcnmeepir caavnvdgih lalgmkdgsl tvlrvrdmte vvhikdrkea ihelkyspdg
      421 tylavgcnds svdiygvaqr ykkfgecvgs lsfithldws sdsrylqtnd gngkrlfyrm
      481 pggkevanke eikgvhwasw tcvsglevng iwpkysdvnd insvdgnyig qvlvtaddyg
      541 ivklfrypcl rkgakfkkyi ghsahvtnvr wshdyqwvis iggadhsvfq wkfiperklk
      601 dalhiapqes ladsnsdesd sdlsdvpeld seieqetqlt yrrqvykedl phlkeqykek
      661 qksgtskrre rapgnsirlh fvhgyrgydc rsnlfytqtg eivyhvaavg vvynrqqntq
      721 rfylghdddv lclavhpvrd lvatgqvgrd psihiwdtet tkplsilkgy hqygvcavdf
      781 sadgrrlasa glddghtvvl wdwkrgerls vtrgskdkif vvkmnpyvpd klmtagikhi
      841 kfwrragggl igrkgyigtl gkndtmmsav ygwteemafs gtstgdvciw rdiflvktvk
      901 ahdgpvfsmh alekgfvtgg kdgvvalwdd sferclktya ikraalapgs kglllednps
      961 iraislghgh ilvgtkngei levdksgpit llvqghmege vwglathpyl picatvsddk
     1021 tlriwdlsps hcmlavrklk kggrcccfsp dgkalavgln dgsflmanad tledlvsfhh
     1081 rkdiisdirf spgsgkylav ashdsfidiy nvmsskrvgi ckgatsyith vdwdirgkll
     1141 qvntgakeql ffeaprgkkq tipsgeaeki gwaswtsvlg lccegiwpvi gevmdvtasc
     1201 ltsdktvlat gddlgfvklf rypakgkfgk fkryvahsth vtnvrwtydd smlvtlggad
     1261 mslmvwtnem egyrekrpcd seesdidsee dggydsdvtr eneisytira lstnirpmfg
     1321 ikphlqqkep stderppvsr appqpeklqt nnvgkkkrpi edlvlelvfg yrgrdcrnnv
     1381 hylndgddii yhtasvgilh nvatgtqsfy qehnddilcl tvnqhpkfin ivatgqvgds
     1441 admsatapsv hvwdavnkqt lsilrcyhsk gvcsvsfsat gklllsvgld pehtvtiwrw
     1501 qegakiasra ghnqrifvae frpdsdsqfv svgvkhvkfw tlagrallsk kgllsaleda
     1561 rmqtmlavaf gannltftgt vsgdvcvwkd hvlcrivara hngpvfamyt tlrdglivtg
     1621 gkerparyw
//
LOCUS       XP_061012459            1609 aa            linear   MAM 02-DEC-2023
DEFINITION  echinoderm microtubule-associated protein-like 5 isoform X5 [Dama
            dama].
ACCESSION   XP_061012459
VERSION     XP_061012459.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156476.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1609
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1609
                     /product="echinoderm microtubule-associated protein-like 5
                     isoform X5"
                     /calculated_mol_wt=178985
     Region          <2..49
                     /region_name="HELP"
                     /note="HELP motif; pfam03451"
                     /db_xref="CDD:460922"
     Region          58..438
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          64..104
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          110..148
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          153..201
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          203..233
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          240..273
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          286..321
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          328..352
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          370..406
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          411..451
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          449..826
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(450,468,472,478..479,490..491,534,538,545..546,
                     561..562,579,585,591..592,605,704,709,725..726,744,750,
                     756..757,769,771,789,794,801..802,814..815)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          454..494
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          521..560
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <672..715
                     /region_name="HELP"
                     /note="HELP motif; pfam03451"
                     /db_xref="CDD:460922"
     Region          708..1112
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          730..769
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          775..814
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          819..861
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          867..900
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          906..940
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          943..1544
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          961..994
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1001..1025
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1043..1078
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1085..1112
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1196..1235
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <1355..1402
                     /region_name="HELP"
                     /note="HELP motif; pfam03451"
                     /db_xref="CDD:460922"
     Region          1430..1465
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1472..1510
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..1609
                     /gene="EML5"
                     /coded_by="XM_061156476.1:1..4830"
                     /db_xref="GeneID:133065943"
ORIGIN      
        1 maarsapsch lrlewvygyr ghqcrnnlyy taakeivyfv agvgvvyspr ehrqkfyrgh
       61 sddiislalh pervlvatgq vgkepyiciw dsytvqtvsv lkdvhthgva clafdldgqr
      121 lvsvgldskn avcvwdwkrg kmlsmapght drifdiswdl yqpnklvscg vkhikfwslc
      181 gnaltpkrgv fgktgdlqti lclacardel tysgalngdi yvwkginlir tiqgahtagi
      241 fsmnaceegf atggrdgcir lwdltfkpit vidlreadqg ykglsvrsvc wrgdhilvgt
      301 qdseifeivv hernrpflim qghcegelwa laihptkpla vtgsddrsvr iwslvdhali
      361 arcnmeepir caavnvdgih lalgmkdgsl tvlrvrdmte vvhikdrkea ihelkyspdg
      421 tylavgcnds svdiygvaqr ykkfgecvgs lsfithldws sdsrylqtnd gngkrlfyrm
      481 pggkevanke eikgvhwasw tcvsglevng iwpkysdvnd insvdgnyig qvlvtaddyg
      541 ivklfrypcl rkgakfkkyi ghsahvtnvr wshdyqwvis iggadhsvfq wkfiperklk
      601 dalhiapqes ladsnsdesd sdlsdvpeld seieqetqlt yrrqvykedl phlkeqykek
      661 qksgtskrre rapgnsirlh fvhgyrgydc rsnlfytqtg eivyhvaavg vvynrqqntq
      721 rfylghdddv lclavhpvrd lvatgqvgrd psihiwdtet tkplsilkgy hqygvcavdf
      781 sadgrrlasa glddghtvvl wdwkrgerls vtrgskdkif vvkmnpyvpd klmtagikhi
      841 kfwrragggl igrkgyigtl gkndtmmsav ygwteemafs gtstgdvciw rdiflvktvk
      901 ahdgpvfsmh alekgfvtgg kdgvvalwdd sferclktya ikraalapgs kglllednps
      961 iraislghgh ilvgtkngei levdksgpit llvqghmege vwglathpyl picatvsddk
     1021 tlriwdlsps hcmlavrklk kggrcccfsp dgkalavgln dgsflmanad tledlvsfhh
     1081 rkdiisdirf spgsgkylav ashdsfidiy nvmsskrvgi ckgatsyith vdwdirgkll
     1141 qvntgakeql ffeaprgkkq tipsgeaeki gwaswtsvlg lccegiwpvi gevmdvtasc
     1201 ltsdktvlat gddlgfvklf rypakgkfgk fkryvahsth vtnvrwtydd smlvtlggad
     1261 mslmvwtnem egyrekrpcd seesdidsee dggydsdvtr eneisytira lstnirpmfg
     1321 ikphlqqkep stderppvsr appqpeklqt nnvgkkkrpi edlvlelvfg yrgrdcrnnv
     1381 hylndgddii yhtasvgilh nvatgtqsfy qehnddilcl tvnqhpkfin ivatgqvgds
     1441 admsatapsv hvwdavnkqt lsilrcyhsk gvcsvsfsat gklllsvgld pehtvtiwrw
     1501 qegakiasra ghnqrifvae frpdsdsqfv svgvkhvkfw tlagrallsk kgllsaleda
     1561 rmqtmlavaf gavpsvemsv cgkttycves wpelttgpcl pctppfetg
//
LOCUS       XP_061012460            1609 aa            linear   MAM 02-DEC-2023
DEFINITION  echinoderm microtubule-associated protein-like 5 isoform X5 [Dama
            dama].
ACCESSION   XP_061012460
VERSION     XP_061012460.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156477.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1609
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1609
                     /product="echinoderm microtubule-associated protein-like 5
                     isoform X5"
                     /calculated_mol_wt=178985
     Region          <2..49
                     /region_name="HELP"
                     /note="HELP motif; pfam03451"
                     /db_xref="CDD:460922"
     Region          58..438
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          64..104
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          110..148
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          153..201
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          203..233
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          240..273
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          286..321
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          328..352
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          370..406
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          411..451
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          449..826
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(450,468,472,478..479,490..491,534,538,545..546,
                     561..562,579,585,591..592,605,704,709,725..726,744,750,
                     756..757,769,771,789,794,801..802,814..815)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          454..494
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          521..560
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <672..715
                     /region_name="HELP"
                     /note="HELP motif; pfam03451"
                     /db_xref="CDD:460922"
     Region          708..1112
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          730..769
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          775..814
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          819..861
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          867..900
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          906..940
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          943..1544
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          961..994
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1001..1025
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1043..1078
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1085..1112
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1196..1235
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <1355..1402
                     /region_name="HELP"
                     /note="HELP motif; pfam03451"
                     /db_xref="CDD:460922"
     Region          1430..1465
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1472..1510
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..1609
                     /gene="EML5"
                     /coded_by="XM_061156477.1:1..4830"
                     /db_xref="GeneID:133065943"
ORIGIN      
        1 maarsapsch lrlewvygyr ghqcrnnlyy taakeivyfv agvgvvyspr ehrqkfyrgh
       61 sddiislalh pervlvatgq vgkepyiciw dsytvqtvsv lkdvhthgva clafdldgqr
      121 lvsvgldskn avcvwdwkrg kmlsmapght drifdiswdl yqpnklvscg vkhikfwslc
      181 gnaltpkrgv fgktgdlqti lclacardel tysgalngdi yvwkginlir tiqgahtagi
      241 fsmnaceegf atggrdgcir lwdltfkpit vidlreadqg ykglsvrsvc wrgdhilvgt
      301 qdseifeivv hernrpflim qghcegelwa laihptkpla vtgsddrsvr iwslvdhali
      361 arcnmeepir caavnvdgih lalgmkdgsl tvlrvrdmte vvhikdrkea ihelkyspdg
      421 tylavgcnds svdiygvaqr ykkfgecvgs lsfithldws sdsrylqtnd gngkrlfyrm
      481 pggkevanke eikgvhwasw tcvsglevng iwpkysdvnd insvdgnyig qvlvtaddyg
      541 ivklfrypcl rkgakfkkyi ghsahvtnvr wshdyqwvis iggadhsvfq wkfiperklk
      601 dalhiapqes ladsnsdesd sdlsdvpeld seieqetqlt yrrqvykedl phlkeqykek
      661 qksgtskrre rapgnsirlh fvhgyrgydc rsnlfytqtg eivyhvaavg vvynrqqntq
      721 rfylghdddv lclavhpvrd lvatgqvgrd psihiwdtet tkplsilkgy hqygvcavdf
      781 sadgrrlasa glddghtvvl wdwkrgerls vtrgskdkif vvkmnpyvpd klmtagikhi
      841 kfwrragggl igrkgyigtl gkndtmmsav ygwteemafs gtstgdvciw rdiflvktvk
      901 ahdgpvfsmh alekgfvtgg kdgvvalwdd sferclktya ikraalapgs kglllednps
      961 iraislghgh ilvgtkngei levdksgpit llvqghmege vwglathpyl picatvsddk
     1021 tlriwdlsps hcmlavrklk kggrcccfsp dgkalavgln dgsflmanad tledlvsfhh
     1081 rkdiisdirf spgsgkylav ashdsfidiy nvmsskrvgi ckgatsyith vdwdirgkll
     1141 qvntgakeql ffeaprgkkq tipsgeaeki gwaswtsvlg lccegiwpvi gevmdvtasc
     1201 ltsdktvlat gddlgfvklf rypakgkfgk fkryvahsth vtnvrwtydd smlvtlggad
     1261 mslmvwtnem egyrekrpcd seesdidsee dggydsdvtr eneisytira lstnirpmfg
     1321 ikphlqqkep stderppvsr appqpeklqt nnvgkkkrpi edlvlelvfg yrgrdcrnnv
     1381 hylndgddii yhtasvgilh nvatgtqsfy qehnddilcl tvnqhpkfin ivatgqvgds
     1441 admsatapsv hvwdavnkqt lsilrcyhsk gvcsvsfsat gklllsvgld pehtvtiwrw
     1501 qegakiasra ghnqrifvae frpdsdsqfv svgvkhvkfw tlagrallsk kgllsaleda
     1561 rmqtmlavaf gavpsvemsv cgkttycves wpelttgpcl pctppfetg
//
LOCUS       XP_061012462             753 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger CCCH domain-containing protein 14 isoform X1 [Dama
            dama].
ACCESSION   XP_061012462
VERSION     XP_061012462.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156479.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..753
                     /product="zinc finger CCCH domain-containing protein 14
                     isoform X1"
                     /calculated_mol_wt=84198
     Region          619..636
                     /region_name="zf-CCCH_2"
                     /note="RNA-binding, Nab2-type zinc finger; pfam14608"
                     /db_xref="CDD:464217"
     Region          621..>716
                     /region_name="zf-CCCH_3"
                     /note="Zinc-finger containing family; pfam15663"
                     /db_xref="CDD:464787"
     Region          639..657
                     /region_name="zf-CCCH_2"
                     /note="RNA-binding, Nab2-type zinc finger; pfam14608"
                     /db_xref="CDD:464217"
     CDS             1..753
                     /gene="ZC3H14"
                     /coded_by="XM_061156479.1:102..2363"
                     /db_xref="GeneID:133065945"
ORIGIN      
        1 meigteisrk irsaikgklq elgayvdeel pdyimvmvan kksqdqmted lslflgnntv
       61 rftvwyvsey spseqrlarv ksrlhgvldk lrsvttdpss lkssdtnlfd gnvpsnkssf
      121 srgderrhea avpplavsst rpekresrvp tgsqeqkatn vrqtyddgaa trlmstvkpl
      181 relapsedvi dikpepddli dedlnfvqen plsqkkttvt ltygssrpsi eiyrppasrn
      241 adsgthlnrl qfqqqqnsvh aakqldvqss rvyetgrlce pevlhsleet yspffrsnse
      301 kmsieeenfr krklpvvssv vkvkkfshdg eeededddcg srtgslsssv svpakperrp
      361 slppskqank nlilkaisea qesvtkttny stvsqkqtlp vaprtrtsqe ellaemvqgq
      421 grvprisspi keeeakgdni dksqgtqqrq llsrlqidpv maetlqisqd yydmesmvha
      481 dtrsfilkkp klseelvmap nqesgmktad alrvlsghlm qtrdlvqpdk paspkfivtl
      541 dgvpsppgym sdqeedmsse gmraaqhpaa shgglagllr pqharvlsrq ledpdgsfan
      601 aemselsvaq kpekllerck ywpackngda cpyhhpvspc kafpnckfae kclfvhpnck
      661 ydakctkpdc pfthmsrrtp glppkpvtap appsssqlcr yfpackkmec pfyhpkhcrf
      721 ntqctrpdct fyhpaitvpp rhalkwirpq tse
//
LOCUS       XP_061012463             735 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger CCCH domain-containing protein 14 isoform X2 [Dama
            dama].
ACCESSION   XP_061012463
VERSION     XP_061012463.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156480.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..735
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..735
                     /product="zinc finger CCCH domain-containing protein 14
                     isoform X2"
                     /calculated_mol_wt=82061
     Region          601..618
                     /region_name="zf-CCCH_2"
                     /note="RNA-binding, Nab2-type zinc finger; pfam14608"
                     /db_xref="CDD:464217"
     Region          603..>698
                     /region_name="zf-CCCH_3"
                     /note="Zinc-finger containing family; pfam15663"
                     /db_xref="CDD:464787"
     Region          621..639
                     /region_name="zf-CCCH_2"
                     /note="RNA-binding, Nab2-type zinc finger; pfam14608"
                     /db_xref="CDD:464217"
     CDS             1..735
                     /gene="ZC3H14"
                     /coded_by="XM_061156480.1:102..2309"
                     /db_xref="GeneID:133065945"
ORIGIN      
        1 meigteisrk irsaikgklq elgayvdeel pdyimvmvan kksqdqmted lslflgnntv
       61 rftvwlhgvl dklrsvttdp sslkssdtnl fdgnvpsnks sfsrgderrh eaavpplavs
      121 strpekresr vptgsqeqka tnvrqtyddg aatrlmstvk plrelapsed vidikpepdd
      181 lidedlnfvq enplsqkktt vtltygssrp sieiyrppas rnadsgthln rlqfqqqqns
      241 vhaakqldvq ssrvyetgrl cepevlhsle etyspffrsn sekmsieeen frkrklpvvs
      301 svvkvkkfsh dgeeededdd cgsrtgslss svsvpakper rpslppskqa nknlilkais
      361 eaqesvtktt nystvsqkqt lpvaprtrts qeellaemvq gqgrvpriss pikeeeakgd
      421 nidksqgtqq rqllsrlqid pvmaetlqis qdyydmesmv hadtrsfilk kpklseelvm
      481 apnqesgmkt adalrvlsgh lmqtrdlvqp dkpaspkfiv tldgvpsppg ymsdqeedms
      541 segmraaqhp aashgglagl lrpqharvls rqledpdgsf anaemselsv aqkpekller
      601 ckywpackng dacpyhhpvs pckafpnckf aekclfvhpn ckydakctkp dcpfthmsrr
      661 tpglppkpvt apappsssql cryfpackkm ecpfyhpkhc rfntqctrpd ctfyhpaitv
      721 pprhalkwir pqtse
//
LOCUS       XP_061012464             728 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger CCCH domain-containing protein 14 isoform X3 [Dama
            dama].
ACCESSION   XP_061012464
VERSION     XP_061012464.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156481.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..728
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..728
                     /product="zinc finger CCCH domain-containing protein 14
                     isoform X3"
                     /calculated_mol_wt=81362
     Region          594..611
                     /region_name="zf-CCCH_2"
                     /note="RNA-binding, Nab2-type zinc finger; pfam14608"
                     /db_xref="CDD:464217"
     Region          596..>691
                     /region_name="zf-CCCH_3"
                     /note="Zinc-finger containing family; pfam15663"
                     /db_xref="CDD:464787"
     Region          614..632
                     /region_name="zf-CCCH_2"
                     /note="RNA-binding, Nab2-type zinc finger; pfam14608"
                     /db_xref="CDD:464217"
     CDS             1..728
                     /gene="ZC3H14"
                     /coded_by="XM_061156481.1:102..2288"
                     /db_xref="GeneID:133065945"
ORIGIN      
        1 meigteisrk irsaikgklq elgayvdeel pdyimvmvan kksqdqmted lslflgnntv
       61 rftvwyvsey spseqrlarv ksrlhgvldk lrsvttdpss lkssdtnlfd gnvpsnkssf
      121 srgderrhea avpplavsst rpekresrvp tgsqeqkatn vrqtyddgaa trlmstvkpl
      181 relapsedvi dikpepddli dedlnfvqen plsqkkttvt ltygssrpsi eiyrppasrn
      241 adsgthlnrl qfqqqqnsvh aakqldvqss rvyetgrlce pevlhsleet yspffrsnse
      301 kmsieeenfr krklpvvssv vkvkkfshdg eeededddcg srtgslsssv svpakperrp
      361 slppskqank nlilkaisea qesvtkttny stvsqkqtlp vaprtrtsqe ellaemvqgq
      421 grvprisspi keeeakgdni dksqdyydme smvhadtrsf ilkkpklsee lvmapnqesg
      481 mktadalrvl sghlmqtrdl vqpdkpaspk fivtldgvps ppgymsdqee dmssegmraa
      541 qhpaashggl agllrpqhar vlsrqledpd gsfanaemse lsvaqkpekl lerckywpac
      601 kngdacpyhh pvspckafpn ckfaekclfv hpnckydakc tkpdcpfthm srrtpglppk
      661 pvtapappss sqlcryfpac kkmecpfyhp khcrfntqct rpdctfyhpa itvpprhalk
      721 wirpqtse
//
LOCUS       XP_061012465             719 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger CCCH domain-containing protein 14 isoform X4 [Dama
            dama].
ACCESSION   XP_061012465
VERSION     XP_061012465.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156482.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..719
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..719
                     /product="zinc finger CCCH domain-containing protein 14
                     isoform X4"
                     /calculated_mol_wt=80350
     Region          585..602
                     /region_name="zf-CCCH_2"
                     /note="RNA-binding, Nab2-type zinc finger; pfam14608"
                     /db_xref="CDD:464217"
     Region          587..>682
                     /region_name="zf-CCCH_3"
                     /note="Zinc-finger containing family; pfam15663"
                     /db_xref="CDD:464787"
     Region          605..623
                     /region_name="zf-CCCH_2"
                     /note="RNA-binding, Nab2-type zinc finger; pfam14608"
                     /db_xref="CDD:464217"
     CDS             1..719
                     /gene="ZC3H14"
                     /coded_by="XM_061156482.1:193..2352"
                     /db_xref="GeneID:133065945"
ORIGIN      
        1 mvmvankksq dqmtedlslf lgnntvrftv wyvseyspse qrlarvksrl hgvldklrsv
       61 ttdpsslkss dtnlfdgnvp snkssfsrgd errheaavpp lavsstrpek resrvptgsq
      121 eqkatnvrqt yddgaatrlm stvkplrela psedvidikp epddlidedl nfvqenplsq
      181 kkttvtltyg ssrpsieiyr ppasrnadsg thlnrlqfqq qqnsvhaakq ldvqssrvye
      241 tgrlcepevl hsleetyspf frsnsekmsi eeenfrkrkl pvvssvvkvk kfshdgeeed
      301 edddcgsrtg slsssvsvpa kperrpslpp skqanknlil kaiseaqesv tkttnystvs
      361 qkqtlpvapr trtsqeella emvqgqgrvp risspikeee akgdnidksq gtqqrqllsr
      421 lqidpvmaet lqisqdyydm esmvhadtrs filkkpklse elvmapnqes gmktadalrv
      481 lsghlmqtrd lvqpdkpasp kfivtldgvp sppgymsdqe edmssegmra aqhpaashgg
      541 lagllrpqha rvlsrqledp dgsfanaems elsvaqkpek llerckywpa ckngdacpyh
      601 hpvspckafp nckfaekclf vhpnckydak ctkpdcpfth msrrtpglpp kpvtapapps
      661 ssqlcryfpa ckkmecpfyh pkhcrfntqc trpdctfyhp aitvpprhal kwirpqtse
//
LOCUS       XP_061012466             710 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger CCCH domain-containing protein 14 isoform X5 [Dama
            dama].
ACCESSION   XP_061012466
VERSION     XP_061012466.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156483.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..710
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..710
                     /product="zinc finger CCCH domain-containing protein 14
                     isoform X5"
                     /calculated_mol_wt=79225
     Region          576..593
                     /region_name="zf-CCCH_2"
                     /note="RNA-binding, Nab2-type zinc finger; pfam14608"
                     /db_xref="CDD:464217"
     Region          578..>673
                     /region_name="zf-CCCH_3"
                     /note="Zinc-finger containing family; pfam15663"
                     /db_xref="CDD:464787"
     Region          596..614
                     /region_name="zf-CCCH_2"
                     /note="RNA-binding, Nab2-type zinc finger; pfam14608"
                     /db_xref="CDD:464217"
     CDS             1..710
                     /gene="ZC3H14"
                     /coded_by="XM_061156483.1:102..2234"
                     /db_xref="GeneID:133065945"
ORIGIN      
        1 meigteisrk irsaikgklq elgayvdeel pdyimvmvan kksqdqmted lslflgnntv
       61 rftvwlhgvl dklrsvttdp sslkssdtnl fdgnvpsnks sfsrgderrh eaavpplavs
      121 strpekresr vptgsqeqka tnvrqtyddg aatrlmstvk plrelapsed vidikpepdd
      181 lidedlnfvq enplsqkktt vtltygssrp sieiyrppas rnadsgthln rlqfqqqqns
      241 vhaakqldvq ssrvyetgrl cepevlhsle etyspffrsn sekmsieeen frkrklpvvs
      301 svvkvkkfsh dgeeededdd cgsrtgslss svsvpakper rpslppskqa nknlilkais
      361 eaqesvtktt nystvsqkqt lpvaprtrts qeellaemvq gqgrvpriss pikeeeakgd
      421 nidksqdyyd mesmvhadtr sfilkkpkls eelvmapnqe sgmktadalr vlsghlmqtr
      481 dlvqpdkpas pkfivtldgv psppgymsdq eedmssegmr aaqhpaashg glagllrpqh
      541 arvlsrqled pdgsfanaem selsvaqkpe kllerckywp ackngdacpy hhpvspckaf
      601 pnckfaekcl fvhpnckyda kctkpdcpft hmsrrtpglp pkpvtapapp sssqlcryfp
      661 ackkmecpfy hpkhcrfntq ctrpdctfyh paitvpprha lkwirpqtse
//
LOCUS       XP_061012467             622 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger CCCH domain-containing protein 14 isoform X6 [Dama
            dama].
ACCESSION   XP_061012467
VERSION     XP_061012467.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156484.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..622
                     /product="zinc finger CCCH domain-containing protein 14
                     isoform X6"
                     /calculated_mol_wt=69883
     Region          488..505
                     /region_name="zf-CCCH_2"
                     /note="RNA-binding, Nab2-type zinc finger; pfam14608"
                     /db_xref="CDD:464217"
     Region          490..>585
                     /region_name="zf-CCCH_3"
                     /note="Zinc-finger containing family; pfam15663"
                     /db_xref="CDD:464787"
     Region          508..526
                     /region_name="zf-CCCH_2"
                     /note="RNA-binding, Nab2-type zinc finger; pfam14608"
                     /db_xref="CDD:464217"
     CDS             1..622
                     /gene="ZC3H14"
                     /coded_by="XM_061156484.1:102..1970"
                     /db_xref="GeneID:133065945"
ORIGIN      
        1 meigteisrk irsaikgklq elgayvdeel pdyimvmvan kksqdqmted lslflgnntv
       61 rftvwyvsey spseqrlarv ksrlhgvldk lrsvttdpss lkssdtnlfd gnvpsnkssf
      121 srgderrhea avpplavsst rpekresrvp tgsqeqkatn vrqtyddgaa trlmstvkpl
      181 relapsedvi dikpepddli dedlnfvqen plsqkkttvt ltygssrpsi eiyrppasrn
      241 adsgthlnrl qfqqqqnsvh aakqldvqss rvyetgrlce pevlhsleet yspffrsnse
      301 kmsieeenfr krklpvvssv vkvkkfshdg eeededddcg srtgslsssv svpakperrp
      361 slppskqank nlilkaisea qesvtkttny stvsqkqtlp vaprtrtsqe ellaemvqgq
      421 grvprisspi keeeakgdni dksqgtqqrq llsrlqidpv maetlqisqa emselsvaqk
      481 pekllercky wpackngdac pyhhpvspck afpnckfaek clfvhpncky dakctkpdcp
      541 fthmsrrtpg lppkpvtapa ppsssqlcry fpackkmecp fyhpkhcrfn tqctrpdctf
      601 yhpaitvppr halkwirpqt se
//
LOCUS       XP_061012468             604 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger CCCH domain-containing protein 14 isoform X7 [Dama
            dama].
ACCESSION   XP_061012468
VERSION     XP_061012468.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156485.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..604
                     /product="zinc finger CCCH domain-containing protein 14
                     isoform X7"
                     /calculated_mol_wt=67746
     Region          470..487
                     /region_name="zf-CCCH_2"
                     /note="RNA-binding, Nab2-type zinc finger; pfam14608"
                     /db_xref="CDD:464217"
     Region          472..>567
                     /region_name="zf-CCCH_3"
                     /note="Zinc-finger containing family; pfam15663"
                     /db_xref="CDD:464787"
     Region          490..508
                     /region_name="zf-CCCH_2"
                     /note="RNA-binding, Nab2-type zinc finger; pfam14608"
                     /db_xref="CDD:464217"
     CDS             1..604
                     /gene="ZC3H14"
                     /coded_by="XM_061156485.1:102..1916"
                     /db_xref="GeneID:133065945"
ORIGIN      
        1 meigteisrk irsaikgklq elgayvdeel pdyimvmvan kksqdqmted lslflgnntv
       61 rftvwlhgvl dklrsvttdp sslkssdtnl fdgnvpsnks sfsrgderrh eaavpplavs
      121 strpekresr vptgsqeqka tnvrqtyddg aatrlmstvk plrelapsed vidikpepdd
      181 lidedlnfvq enplsqkktt vtltygssrp sieiyrppas rnadsgthln rlqfqqqqns
      241 vhaakqldvq ssrvyetgrl cepevlhsle etyspffrsn sekmsieeen frkrklpvvs
      301 svvkvkkfsh dgeeededdd cgsrtgslss svsvpakper rpslppskqa nknlilkais
      361 eaqesvtktt nystvsqkqt lpvaprtrts qeellaemvq gqgrvpriss pikeeeakgd
      421 nidksqgtqq rqllsrlqid pvmaetlqis qaemselsva qkpekllerc kywpackngd
      481 acpyhhpvsp ckafpnckfa ekclfvhpnc kydakctkpd cpfthmsrrt pglppkpvta
      541 pappsssqlc ryfpackkme cpfyhpkhcr fntqctrpdc tfyhpaitvp prhalkwirp
      601 qtse
//
LOCUS       XP_061012469             597 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger CCCH domain-containing protein 14 isoform X8 [Dama
            dama].
ACCESSION   XP_061012469
VERSION     XP_061012469.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156486.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..597
                     /product="zinc finger CCCH domain-containing protein 14
                     isoform X8"
                     /calculated_mol_wt=67047
     Region          463..480
                     /region_name="zf-CCCH_2"
                     /note="RNA-binding, Nab2-type zinc finger; pfam14608"
                     /db_xref="CDD:464217"
     Region          465..>560
                     /region_name="zf-CCCH_3"
                     /note="Zinc-finger containing family; pfam15663"
                     /db_xref="CDD:464787"
     Region          483..501
                     /region_name="zf-CCCH_2"
                     /note="RNA-binding, Nab2-type zinc finger; pfam14608"
                     /db_xref="CDD:464217"
     CDS             1..597
                     /gene="ZC3H14"
                     /coded_by="XM_061156486.1:102..1895"
                     /db_xref="GeneID:133065945"
ORIGIN      
        1 meigteisrk irsaikgklq elgayvdeel pdyimvmvan kksqdqmted lslflgnntv
       61 rftvwyvsey spseqrlarv ksrlhgvldk lrsvttdpss lkssdtnlfd gnvpsnkssf
      121 srgderrhea avpplavsst rpekresrvp tgsqeqkatn vrqtyddgaa trlmstvkpl
      181 relapsedvi dikpepddli dedlnfvqen plsqkkttvt ltygssrpsi eiyrppasrn
      241 adsgthlnrl qfqqqqnsvh aakqldvqss rvyetgrlce pevlhsleet yspffrsnse
      301 kmsieeenfr krklpvvssv vkvkkfshdg eeededddcg srtgslsssv svpakperrp
      361 slppskqank nlilkaisea qesvtkttny stvsqkqtlp vaprtrtsqe ellaemvqgq
      421 grvprisspi keeeakgdni dksqaemsel svaqkpekll erckywpack ngdacpyhhp
      481 vspckafpnc kfaekclfvh pnckydakct kpdcpfthms rrtpglppkp vtapappsss
      541 qlcryfpack kmecpfyhpk hcrfntqctr pdctfyhpai tvpprhalkw irpqtse
//
LOCUS       XP_061012470             579 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger CCCH domain-containing protein 14 isoform X9 [Dama
            dama].
ACCESSION   XP_061012470
VERSION     XP_061012470.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156487.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..579
                     /product="zinc finger CCCH domain-containing protein 14
                     isoform X9"
                     /calculated_mol_wt=64910
     Region          445..462
                     /region_name="zf-CCCH_2"
                     /note="RNA-binding, Nab2-type zinc finger; pfam14608"
                     /db_xref="CDD:464217"
     Region          447..>542
                     /region_name="zf-CCCH_3"
                     /note="Zinc-finger containing family; pfam15663"
                     /db_xref="CDD:464787"
     Region          465..483
                     /region_name="zf-CCCH_2"
                     /note="RNA-binding, Nab2-type zinc finger; pfam14608"
                     /db_xref="CDD:464217"
     CDS             1..579
                     /gene="ZC3H14"
                     /coded_by="XM_061156487.1:102..1841"
                     /db_xref="GeneID:133065945"
ORIGIN      
        1 meigteisrk irsaikgklq elgayvdeel pdyimvmvan kksqdqmted lslflgnntv
       61 rftvwlhgvl dklrsvttdp sslkssdtnl fdgnvpsnks sfsrgderrh eaavpplavs
      121 strpekresr vptgsqeqka tnvrqtyddg aatrlmstvk plrelapsed vidikpepdd
      181 lidedlnfvq enplsqkktt vtltygssrp sieiyrppas rnadsgthln rlqfqqqqns
      241 vhaakqldvq ssrvyetgrl cepevlhsle etyspffrsn sekmsieeen frkrklpvvs
      301 svvkvkkfsh dgeeededdd cgsrtgslss svsvpakper rpslppskqa nknlilkais
      361 eaqesvtktt nystvsqkqt lpvaprtrts qeellaemvq gqgrvpriss pikeeeakgd
      421 nidksqaems elsvaqkpek llerckywpa ckngdacpyh hpvspckafp nckfaekclf
      481 vhpnckydak ctkpdcpfth msrrtpglpp kpvtapapps ssqlcryfpa ckkmecpfyh
      541 pkhcrfntqc trpdctfyhp aitvpprhal kwirpqtse
//
LOCUS       XP_061012471            1125 aa            linear   MAM 02-DEC-2023
DEFINITION  tyrosine-protein phosphatase non-receptor type 21 [Dama dama].
ACCESSION   XP_061012471
VERSION     XP_061012471.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156488.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1125
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1125
                     /product="tyrosine-protein phosphatase non-receptor type
                     21"
                     /calculated_mol_wt=125707
     Region          20..106
                     /region_name="FERM_F1_PTPN21"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain, F1 sub-domain, found in tyrosine-protein
                     phosphatase non-receptor type 21 (PTPN21) and similar
                     proteins; cd17192"
                     /db_xref="CDD:340712"
     Region          24..222
                     /region_name="B41"
                     /note="Band 4.1 homologues; smart00295"
                     /db_xref="CDD:214604"
     Region          217..307
                     /region_name="FERM_C_PTPN14_PTPN21"
                     /note="FERM domain C-lobe of Protein tyrosine phosphatase
                     non-receptor proteins 14 and 21 (PTPN14 and 21); cd13188"
                     /db_xref="CDD:270009"
     Site            order(226,243,245,252)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270009"
     Site            order(256,261..264,294,298,301..302)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270009"
     Site            294..305
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:270009"
     Region          383..>785
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          834..1120
                     /region_name="PTP_DSP_cys"
                     /note="cys-based protein tyrosine phosphatase and
                     dual-specificity phosphatase superfamily; cl28904"
                     /db_xref="CDD:475123"
     CDS             1..1125
                     /gene="PTPN21"
                     /coded_by="XM_061156488.1:273..3650"
                     /db_xref="GeneID:133065946"
ORIGIN      
        1 mplpfglklk rtrrytvssk sclvariqll nnefveftls vestgqesle avaqrlelre
       61 ityfslwyyn kqnqrrwvdl ekplkkqldk yaleptvyfg vvfyvpsvsq lqqeitryqy
      121 ylqlkkdile gnipctleqa iqlaglavqa dfgdfdqyes qdflqkfall pvewlqdekv
      181 leeatqkval lhqkyrglaa pdaemlymqe vermdgygee sypakdsqgs disigacleg
      241 vfvkhksgrp pavfrwhdia nmshnksffa lelankeeti qfqtedmeta kyvwrlcvar
      301 hkfyrlnqcs lqtqtvivnp irrrsssrms lpkpqpyvma appqlqyngh ytepytssld
      361 nlfvtnqngf ychsqtsldr aqaelggrar ngsvysahst sslnspqpyl qpspgssnps
      421 itgsdvlrpd yvpshrhsal ippsyrptpd yetvmkqlqr glapaerhsr slrnlslgys
      481 qpeireharp gsppaapgaf slshsfhspa pypyasaagr rpglgavsvp eltnaqlqar
      541 dcpapsilrt qvyrppppyp hprpanstpd lsrqppasss pdlitrrvhh svqtfqedss
      601 pvahslqevs epltaarrar lqernsvela glahgleglr lqeraapapa lraedgaagp
      661 rgslrgghgk slsdatvlih ssdedededp eegpapspgp rsgrpldgpr aappapgplh
      721 ilepqapgga pgegprprrd gllspsases dlttsgryra rrdslqkrpa sdllsakkna
      781 veglpplggm kksrgdakki gplklaalng lslsrlplpd eekdvparat nderckileq
      841 rleqgmvfte yerilkkrlv dgecstarlp enaernrfqd vlpyddarve lvptkenntg
      901 yinashikvs vsgiewdyia tqgplqntcp dfwqmvweqg iaiiamvtae eeggreksfr
      961 ywprlgsrhn svtygrfkit trfrtdsgcy attglkmkhl lsgqertiwh lqytdwpehg
     1021 cpedlkgfls yleeiqsvrr htnstsepks pnppllvhcs agvgrtgvvi lseimiacle
     1081 hnealdvprv ldllrrqrml mvqtlcqytf vyrvliqflr gsrli
//
LOCUS       XP_061012472             588 aa            linear   MAM 02-DEC-2023
DEFINITION  spermatogenesis-associated protein 7 isoform X1 [Dama dama].
ACCESSION   XP_061012472
VERSION     XP_061012472.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156489.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..588
                     /product="spermatogenesis-associated protein 7 isoform X1"
                     /calculated_mol_wt=65875
     Region          9..418
                     /region_name="HSD3"
                     /note="Spermatogenesis-associated protein 7, or HSD3;
                     pfam15244"
                     /db_xref="CDD:464584"
     CDS             1..588
                     /gene="SPATA7"
                     /coded_by="XM_061156489.1:161..1927"
                     /db_xref="GeneID:133065949"
ORIGIN      
        1 mdasrrvraa svlptfgpsc lfkghlstks nafctdsssl rlstlqlvkn hmavhynkil
       61 sakaavdcsv plsmsasiky adqqrreklk kelarcgmel kftkttvhsk shskslpntl
      121 qkpsgepqne ngllieevne fpsftrspvt sserlslpks qkvltnctek nssgsmssmd
      181 yaasgskkps sgtsygrgpr gtfpgsqkfq lviskapngd lldkhsehfs nrhlpftprt
      241 lkteaksfls qyryytpakr kknctdrrie aetqtelssf ksdfetveik nttdsemnir
      301 qasscvsygt kgritplpfq gpelpwdkvk dgalqcsssr avcqyslqpp sgrkaysdee
      361 ellylsfied vtdeilklgl fsnrflerlf erhikqnkhh leeekmrqll hvlkvdlgct
      421 sqessvrldv mdtlhlrdve kaenseqney kseqdliiqq erqeyqkaln mlltipkeen
      481 eivssneffl piykskyseg viiqqvneet nlgtsawdek nasmsdssld qetsvsvieg
      541 dsdakaepst elcclsaelv psaqlcgvkd rpelegptlr imemsied
//
LOCUS       XP_061012473             556 aa            linear   MAM 02-DEC-2023
DEFINITION  spermatogenesis-associated protein 7 isoform X2 [Dama dama].
ACCESSION   XP_061012473
VERSION     XP_061012473.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156490.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..556
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..556
                     /product="spermatogenesis-associated protein 7 isoform X2"
                     /calculated_mol_wt=62315
     Region          9..386
                     /region_name="HSD3"
                     /note="Spermatogenesis-associated protein 7, or HSD3;
                     pfam15244"
                     /db_xref="CDD:464584"
     CDS             1..556
                     /gene="SPATA7"
                     /coded_by="XM_061156490.1:162..1832"
                     /db_xref="GeneID:133065949"
ORIGIN      
        1 mdasrrvraa svlptfgpsc lfkghlstks naavdcsvpl smsasikyad qqrreklkke
       61 larcgmelkf tkttvhsksh skslpntlqk psgepqneng llieevnefp sftrspvtss
      121 erlslpksqk vltnctekns sgsmssmdya asgskkpssg tsygrgprgt fpgsqkfqlv
      181 iskapngdll dkhsehfsnr hlpftprtlk teaksflsqy ryytpakrkk nctdrrieae
      241 tqtelssfks dfetveiknt tdsemnirqa sscvsygtkg ritplpfqgp elpwdkvkdg
      301 alqcsssrav cqyslqppsg rkaysdeeel lylsfiedvt deilklglfs nrflerlfer
      361 hikqnkhhle eekmrqllhv lkvdlgctsq essvrldvmd tlhlrdveka enseqneyks
      421 eqdliiqqer qeyqkalnml ltipkeenei vssnefflpi ykskysegvi iqqvneetnl
      481 gtsawdekna smsdssldqe tsvsviegds dakaepstel cclsaelvps aqlcgvkdrp
      541 elegptlrim emsied
//
LOCUS       XP_061012475             690 aa            linear   MAM 02-DEC-2023
DEFINITION  galactocerebrosidase isoform X1 [Dama dama].
ACCESSION   XP_061012475
VERSION     XP_061012475.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156492.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..690
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..690
                     /product="galactocerebrosidase isoform X1"
                     /calculated_mol_wt=77516
     Region          60..354
                     /region_name="Glyco_hydro_59"
                     /note="Glycosyl hydrolase family 59; pfam02057"
                     /db_xref="CDD:396577"
     Region          362..478
                     /region_name="Glyco_hydro_59M"
                     /note="Glycosyl hydrolase family 59 central domain;
                     pfam17387"
                     /db_xref="CDD:465411"
     CDS             1..690
                     /gene="GALC"
                     /coded_by="XM_061156492.1:108..2180"
                     /db_xref="GeneID:133065950"
ORIGIN      
        1 mtchtmaerl iqasrqrrak ammaaaglag qaavplllca llapsgayvl ddsdglgref
       61 dgigavsggg atsrllvnyp epyrseildy lfkpnfgasl hilkveiggd gqttdgteps
      121 hmhyaldeny frgyewwlmk eakkrnpnit liglpwsfpg wlgkgfnwpy vnlqltayyi
      181 vtwivgskhy hdldidyigi wnerafdiny ikvlrrmlnh qglqhvkiia sdnlwepisa
      241 smlldpellk vidvigahyp gtltvkdarl tkkklwssed fstvngdvga gcwgrilnqn
      301 yingymtsti awnlvasyyq qlpygrcglm taqepwsghy vveapiwvsa httqftqpgw
      361 yylktvgrle rggsyvaltd glgnltiive tmshkhskci rpllpyfnvs hqfatfdlkg
      421 sfseipelqv wytklgkppe rflfkqldsl wlldsggsft lelqedelft lttltsgrkg
      481 sfpsppksqr fpsvyednfn idypffseap nfadqtgvfe yyvnmedpgd hrftlrqvln
      541 qrpitwaada fntisvigdy twsnltikcd vyietpekgg vfiagrvnkg gilirsargi
      601 ffwifangty rvtgdlagwi iyslghadvt akkwytltlt lngrsssgkl ngktlwknis
      661 vnfpgngwaa igthsfefaq fdnfrveash
//
LOCUS       XP_061012476             625 aa            linear   MAM 02-DEC-2023
DEFINITION  galactocerebrosidase isoform X2 [Dama dama].
ACCESSION   XP_061012476
VERSION     XP_061012476.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156493.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..625
                     /product="galactocerebrosidase isoform X2"
                     /calculated_mol_wt=71048
     Region          6..289
                     /region_name="Glyco_hydro_59"
                     /note="Glycosyl hydrolase family 59; pfam02057"
                     /db_xref="CDD:396577"
     Region          297..413
                     /region_name="Glyco_hydro_59M"
                     /note="Glycosyl hydrolase family 59 central domain;
                     pfam17387"
                     /db_xref="CDD:465411"
     CDS             1..625
                     /gene="GALC"
                     /coded_by="XM_061156493.1:130..2007"
                     /db_xref="GeneID:133065950"
ORIGIN      
        1 msktkatsrl lvnypepyrs eildylfkpn fgaslhilkv eiggdgqttd gtepshmhya
       61 ldenyfrgye wwlmkeakkr npnitliglp wsfpgwlgkg fnwpyvnlql tayyivtwiv
      121 gskhyhdldi dyigiwnera fdinyikvlr rmlnhqglqh vkiiasdnlw episasmlld
      181 pellkvidvi gahypgtltv kdarltkkkl wssedfstvn gdvgagcwgr ilnqnyingy
      241 mtstiawnlv asyyqqlpyg rcglmtaqep wsghyvveap iwvsahttqf tqpgwyylkt
      301 vgrlerggsy valtdglgnl tiivetmshk hskcirpllp yfnvshqfat fdlkgsfsei
      361 pelqvwytkl gkpperflfk qldslwllds ggsftlelqe delftlttlt sgrkgsfpsp
      421 pksqrfpsvy ednfnidypf fseapnfadq tgvfeyyvnm edpgdhrftl rqvlnqrpit
      481 waadafntis vigdytwsnl tikcdvyiet pekggvfiag rvnkggilir sargiffwif
      541 angtyrvtgd lagwiiyslg hadvtakkwy tltltlngrs ssgklngktl wknisvnfpg
      601 ngwaaigths fefaqfdnfr veash
//
LOCUS       XP_061012477             341 aa            linear   MAM 02-DEC-2023
DEFINITION  psychosine receptor [Dama dama].
ACCESSION   XP_061012477
VERSION     XP_061012477.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156494.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..341
                     /product="psychosine receptor"
                     /calculated_mol_wt=39585
     Region          15..305
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          17..41
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          50..71
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          88..110
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          133..149
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          181..204
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          225..247
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          273..298
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..341
                     /gene="GPR65"
                     /coded_by="XM_061156494.1:653..1678"
                     /db_xref="GeneID:133065951"
ORIGIN      
        1 mnstcideqh dldhylfpav yvfvvivsip anigslcvsf lqakqenelg iylfslslsd
       61 llyastlplw inytwnrdnw tlspslckgs aflmylnfys stafltciai drylavvypl
      121 rffflrsrkc afmvslaiwi letilnavil wedetaveyc dakksnftlc ydkyplenwq
      181 irfnfartci gymiplvvim tcnkkvyqav rqnqatenre kkriikllvs itltfilcft
      241 pfhvmllirs ilehnmnlke qvfdhsksgk qsykiyritv altslncvad pilycfitet
      301 grsdmwnilk fftgklnksk rqrkrvlsvs tkdtieldil q
//
LOCUS       XP_061012478             341 aa            linear   MAM 02-DEC-2023
DEFINITION  psychosine receptor [Dama dama].
ACCESSION   XP_061012478
VERSION     XP_061012478.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156495.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..341
                     /product="psychosine receptor"
                     /calculated_mol_wt=39585
     Region          15..305
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          17..41
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          50..71
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          88..110
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          133..149
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          181..204
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          225..247
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          273..298
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..341
                     /gene="GPR65"
                     /coded_by="XM_061156495.1:570..1595"
                     /db_xref="GeneID:133065951"
ORIGIN      
        1 mnstcideqh dldhylfpav yvfvvivsip anigslcvsf lqakqenelg iylfslslsd
       61 llyastlplw inytwnrdnw tlspslckgs aflmylnfys stafltciai drylavvypl
      121 rffflrsrkc afmvslaiwi letilnavil wedetaveyc dakksnftlc ydkyplenwq
      181 irfnfartci gymiplvvim tcnkkvyqav rqnqatenre kkriikllvs itltfilcft
      241 pfhvmllirs ilehnmnlke qvfdhsksgk qsykiyritv altslncvad pilycfitet
      301 grsdmwnilk fftgklnksk rqrkrvlsvs tkdtieldil q
//
LOCUS       XP_061012479             660 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat transmembrane protein FLRT2 [Dama dama].
ACCESSION   XP_061012479
VERSION     XP_061012479.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156496.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..660
                     /product="leucine-rich repeat transmembrane protein FLRT2"
                     /calculated_mol_wt=73540
     Region          35..66
                     /region_name="LRRNT"
                     /note="Leucine rich repeat N-terminal domain; smart00013"
                     /db_xref="CDD:214470"
     Region          65..86
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          70..>311
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          90..110
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          111..134
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          135..160
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          161..181
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          182..205
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          206..231
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          232..253
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          254..277
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          278..301
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          282..>359
                     /region_name="PCC"
                     /note="polycystin cation channel protein; TIGR00864"
                     /db_xref="CDD:188093"
     Region          426..494
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     CDS             1..660
                     /gene="FLRT2"
                     /coded_by="XM_061156496.1:534..2516"
                     /db_xref="GeneID:133065952"
ORIGIN      
        1 mglqitqgpg qgafflkswl lislglssqv skflacpsvc rcdrnfvycn ersltsvplg
       61 ipegvtvlyl hnnqinnagf paelhsiqsv htvylygnql defpmnlpkn vrilhlqenn
      121 iqtisraala qllkleelhl ddnsistvgv edgafreals lkllflsknh lssvpvglpv
      181 dlqelrvden riavisdmaf qnltslerli vdgnlltnkg iaegtfghlt klkefsivrn
      241 slsrpppdlp gthlvrlylq dnqishiplt afsnlrkler ldisnnqlrv ltqgvfdnls
      301 nlkqltarnn pwfcdcsikw vtewlrhipa slnvrgfmcq gpeqvrgmav relnmnllsc
      361 ptttpglppl tpapssappv tqpptfsapi psrsytplsp taskpptipd wdgrervtpp
      421 lseriqlsih fvndtsiqvs wlslftvmay kltwvkmghs lvggivqeri vsgekqhlsl
      481 vnleprstyr iclvpldafn yravedtvcs eatthdayvn ngsntasshe qttshsmgsp
      541 fllagligga vifvlvvllg vfcwhmhrrg rytsqkwkyn rgrrkddyce agtkkdnsil
      601 emtetsfqiv slnndqllkg dfrlqpiytp ngginytdch ipnnmrycns svpdlehcht
//
LOCUS       XP_061012480             660 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat transmembrane protein FLRT2 [Dama dama].
ACCESSION   XP_061012480
VERSION     XP_061012480.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156497.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..660
                     /product="leucine-rich repeat transmembrane protein FLRT2"
                     /calculated_mol_wt=73540
     Region          35..66
                     /region_name="LRRNT"
                     /note="Leucine rich repeat N-terminal domain; smart00013"
                     /db_xref="CDD:214470"
     Region          65..86
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          70..>311
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          90..110
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          111..134
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          135..160
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          161..181
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          182..205
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          206..231
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          232..253
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          254..277
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          278..301
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          282..>359
                     /region_name="PCC"
                     /note="polycystin cation channel protein; TIGR00864"
                     /db_xref="CDD:188093"
     Region          426..494
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     CDS             1..660
                     /gene="FLRT2"
                     /coded_by="XM_061156497.1:642..2624"
                     /db_xref="GeneID:133065952"
ORIGIN      
        1 mglqitqgpg qgafflkswl lislglssqv skflacpsvc rcdrnfvycn ersltsvplg
       61 ipegvtvlyl hnnqinnagf paelhsiqsv htvylygnql defpmnlpkn vrilhlqenn
      121 iqtisraala qllkleelhl ddnsistvgv edgafreals lkllflsknh lssvpvglpv
      181 dlqelrvden riavisdmaf qnltslerli vdgnlltnkg iaegtfghlt klkefsivrn
      241 slsrpppdlp gthlvrlylq dnqishiplt afsnlrkler ldisnnqlrv ltqgvfdnls
      301 nlkqltarnn pwfcdcsikw vtewlrhipa slnvrgfmcq gpeqvrgmav relnmnllsc
      361 ptttpglppl tpapssappv tqpptfsapi psrsytplsp taskpptipd wdgrervtpp
      421 lseriqlsih fvndtsiqvs wlslftvmay kltwvkmghs lvggivqeri vsgekqhlsl
      481 vnleprstyr iclvpldafn yravedtvcs eatthdayvn ngsntasshe qttshsmgsp
      541 fllagligga vifvlvvllg vfcwhmhrrg rytsqkwkyn rgrrkddyce agtkkdnsil
      601 emtetsfqiv slnndqllkg dfrlqpiytp ngginytdch ipnnmrycns svpdlehcht
//
LOCUS       XP_061012481             660 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat transmembrane protein FLRT2 [Dama dama].
ACCESSION   XP_061012481
VERSION     XP_061012481.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156498.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..660
                     /product="leucine-rich repeat transmembrane protein FLRT2"
                     /calculated_mol_wt=73540
     Region          35..66
                     /region_name="LRRNT"
                     /note="Leucine rich repeat N-terminal domain; smart00013"
                     /db_xref="CDD:214470"
     Region          65..86
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          70..>311
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          90..110
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          111..134
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          135..160
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          161..181
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          182..205
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          206..231
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          232..253
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          254..277
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          278..301
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          282..>359
                     /region_name="PCC"
                     /note="polycystin cation channel protein; TIGR00864"
                     /db_xref="CDD:188093"
     Region          426..494
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     CDS             1..660
                     /gene="FLRT2"
                     /coded_by="XM_061156498.1:545..2527"
                     /db_xref="GeneID:133065952"
ORIGIN      
        1 mglqitqgpg qgafflkswl lislglssqv skflacpsvc rcdrnfvycn ersltsvplg
       61 ipegvtvlyl hnnqinnagf paelhsiqsv htvylygnql defpmnlpkn vrilhlqenn
      121 iqtisraala qllkleelhl ddnsistvgv edgafreals lkllflsknh lssvpvglpv
      181 dlqelrvden riavisdmaf qnltslerli vdgnlltnkg iaegtfghlt klkefsivrn
      241 slsrpppdlp gthlvrlylq dnqishiplt afsnlrkler ldisnnqlrv ltqgvfdnls
      301 nlkqltarnn pwfcdcsikw vtewlrhipa slnvrgfmcq gpeqvrgmav relnmnllsc
      361 ptttpglppl tpapssappv tqpptfsapi psrsytplsp taskpptipd wdgrervtpp
      421 lseriqlsih fvndtsiqvs wlslftvmay kltwvkmghs lvggivqeri vsgekqhlsl
      481 vnleprstyr iclvpldafn yravedtvcs eatthdayvn ngsntasshe qttshsmgsp
      541 fllagligga vifvlvvllg vfcwhmhrrg rytsqkwkyn rgrrkddyce agtkkdnsil
      601 emtetsfqiv slnndqllkg dfrlqpiytp ngginytdch ipnnmrycns svpdlehcht
//
LOCUS       XP_061012482             660 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat transmembrane protein FLRT2 [Dama dama].
ACCESSION   XP_061012482
VERSION     XP_061012482.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156499.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..660
                     /product="leucine-rich repeat transmembrane protein FLRT2"
                     /calculated_mol_wt=73540
     Region          35..66
                     /region_name="LRRNT"
                     /note="Leucine rich repeat N-terminal domain; smart00013"
                     /db_xref="CDD:214470"
     Region          65..86
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          70..>311
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          90..110
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          111..134
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          135..160
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          161..181
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          182..205
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          206..231
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          232..253
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          254..277
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          278..301
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          282..>359
                     /region_name="PCC"
                     /note="polycystin cation channel protein; TIGR00864"
                     /db_xref="CDD:188093"
     Region          426..494
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     CDS             1..660
                     /gene="FLRT2"
                     /coded_by="XM_061156499.1:676..2658"
                     /db_xref="GeneID:133065952"
ORIGIN      
        1 mglqitqgpg qgafflkswl lislglssqv skflacpsvc rcdrnfvycn ersltsvplg
       61 ipegvtvlyl hnnqinnagf paelhsiqsv htvylygnql defpmnlpkn vrilhlqenn
      121 iqtisraala qllkleelhl ddnsistvgv edgafreals lkllflsknh lssvpvglpv
      181 dlqelrvden riavisdmaf qnltslerli vdgnlltnkg iaegtfghlt klkefsivrn
      241 slsrpppdlp gthlvrlylq dnqishiplt afsnlrkler ldisnnqlrv ltqgvfdnls
      301 nlkqltarnn pwfcdcsikw vtewlrhipa slnvrgfmcq gpeqvrgmav relnmnllsc
      361 ptttpglppl tpapssappv tqpptfsapi psrsytplsp taskpptipd wdgrervtpp
      421 lseriqlsih fvndtsiqvs wlslftvmay kltwvkmghs lvggivqeri vsgekqhlsl
      481 vnleprstyr iclvpldafn yravedtvcs eatthdayvn ngsntasshe qttshsmgsp
      541 fllagligga vifvlvvllg vfcwhmhrrg rytsqkwkyn rgrrkddyce agtkkdnsil
      601 emtetsfqiv slnndqllkg dfrlqpiytp ngginytdch ipnnmrycns svpdlehcht
//
LOCUS       XP_061012483             660 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat transmembrane protein FLRT2 [Dama dama].
ACCESSION   XP_061012483
VERSION     XP_061012483.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156500.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..660
                     /product="leucine-rich repeat transmembrane protein FLRT2"
                     /calculated_mol_wt=73540
     Region          35..66
                     /region_name="LRRNT"
                     /note="Leucine rich repeat N-terminal domain; smart00013"
                     /db_xref="CDD:214470"
     Region          65..86
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          70..>311
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          90..110
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          111..134
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          135..160
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          161..181
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          182..205
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          206..231
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          232..253
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          254..277
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          278..301
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          282..>359
                     /region_name="PCC"
                     /note="polycystin cation channel protein; TIGR00864"
                     /db_xref="CDD:188093"
     Region          426..494
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     CDS             1..660
                     /gene="FLRT2"
                     /coded_by="XM_061156500.1:1366..3348"
                     /db_xref="GeneID:133065952"
ORIGIN      
        1 mglqitqgpg qgafflkswl lislglssqv skflacpsvc rcdrnfvycn ersltsvplg
       61 ipegvtvlyl hnnqinnagf paelhsiqsv htvylygnql defpmnlpkn vrilhlqenn
      121 iqtisraala qllkleelhl ddnsistvgv edgafreals lkllflsknh lssvpvglpv
      181 dlqelrvden riavisdmaf qnltslerli vdgnlltnkg iaegtfghlt klkefsivrn
      241 slsrpppdlp gthlvrlylq dnqishiplt afsnlrkler ldisnnqlrv ltqgvfdnls
      301 nlkqltarnn pwfcdcsikw vtewlrhipa slnvrgfmcq gpeqvrgmav relnmnllsc
      361 ptttpglppl tpapssappv tqpptfsapi psrsytplsp taskpptipd wdgrervtpp
      421 lseriqlsih fvndtsiqvs wlslftvmay kltwvkmghs lvggivqeri vsgekqhlsl
      481 vnleprstyr iclvpldafn yravedtvcs eatthdayvn ngsntasshe qttshsmgsp
      541 fllagligga vifvlvvllg vfcwhmhrrg rytsqkwkyn rgrrkddyce agtkkdnsil
      601 emtetsfqiv slnndqllkg dfrlqpiytp ngginytdch ipnnmrycns svpdlehcht
//
LOCUS       XP_061012484             660 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat transmembrane protein FLRT2 [Dama dama].
ACCESSION   XP_061012484
VERSION     XP_061012484.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156501.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..660
                     /product="leucine-rich repeat transmembrane protein FLRT2"
                     /calculated_mol_wt=73540
     Region          35..66
                     /region_name="LRRNT"
                     /note="Leucine rich repeat N-terminal domain; smart00013"
                     /db_xref="CDD:214470"
     Region          65..86
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          70..>311
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          90..110
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          111..134
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          135..160
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          161..181
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          182..205
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          206..231
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          232..253
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          254..277
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          278..301
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          282..>359
                     /region_name="PCC"
                     /note="polycystin cation channel protein; TIGR00864"
                     /db_xref="CDD:188093"
     Region          426..494
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     CDS             1..660
                     /gene="FLRT2"
                     /coded_by="XM_061156501.1:409..2391"
                     /db_xref="GeneID:133065952"
ORIGIN      
        1 mglqitqgpg qgafflkswl lislglssqv skflacpsvc rcdrnfvycn ersltsvplg
       61 ipegvtvlyl hnnqinnagf paelhsiqsv htvylygnql defpmnlpkn vrilhlqenn
      121 iqtisraala qllkleelhl ddnsistvgv edgafreals lkllflsknh lssvpvglpv
      181 dlqelrvden riavisdmaf qnltslerli vdgnlltnkg iaegtfghlt klkefsivrn
      241 slsrpppdlp gthlvrlylq dnqishiplt afsnlrkler ldisnnqlrv ltqgvfdnls
      301 nlkqltarnn pwfcdcsikw vtewlrhipa slnvrgfmcq gpeqvrgmav relnmnllsc
      361 ptttpglppl tpapssappv tqpptfsapi psrsytplsp taskpptipd wdgrervtpp
      421 lseriqlsih fvndtsiqvs wlslftvmay kltwvkmghs lvggivqeri vsgekqhlsl
      481 vnleprstyr iclvpldafn yravedtvcs eatthdayvn ngsntasshe qttshsmgsp
      541 fllagligga vifvlvvllg vfcwhmhrrg rytsqkwkyn rgrrkddyce agtkkdnsil
      601 emtetsfqiv slnndqllkg dfrlqpiytp ngginytdch ipnnmrycns svpdlehcht
//
LOCUS       XP_061012485             301 aa            linear   MAM 02-DEC-2023
DEFINITION  protein sel-1 homolog 1 [Dama dama].
ACCESSION   XP_061012485
VERSION     XP_061012485.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156502.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..301
                     /product="protein sel-1 homolog 1"
                     /calculated_mol_wt=33402
     Region          120..168
                     /region_name="FN2"
                     /note="Fibronectin type 2 domain; smart00059"
                     /db_xref="CDD:128373"
     Site            order(131,133,138,152,159,165,167)
                     /site_type="active"
                     /note="putative gelatin-binding site [active]"
                     /db_xref="CDD:238019"
     Region          157..>297
                     /region_name="TPR"
                     /note="TPR repeat [General function prediction only];
                     COG0790"
                     /db_xref="CDD:440553"
     Region          205..231
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     Region          238..267
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     CDS             1..301
                     /gene="SEL1L"
                     /coded_by="XM_061156502.1:126..1031"
                     /db_xref="GeneID:133065954"
ORIGIN      
        1 mrvrfgltll lwavllgsal assdeegnqd esidsktsvp sdesvenhsp agrviagqif
       61 ldseeseles ppqeeednlr sqegesiaee isflespnpe nkdyeeptkv rtpaltaieg
      121 tahgepchfp flfldkeyda ctsdgrddgr lwcattydyk adekwgfcet eeeaakrrqm
      181 qeaemmyqtg mkilngsnrk sqrreayryl qkaasmnhtk alervsyall fgdyltqniq
      241 aakemfeklt eegspkgqta lgflyasglg vnssqakalv yytfgalggn liahmvlvsk
      301 i
//
LOCUS       XP_061012486             897 aa            linear   MAM 02-DEC-2023
DEFINITION  stonin-2 [Dama dama].
ACCESSION   XP_061012486
VERSION     XP_061012486.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156503.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..897
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..897
                     /product="stonin-2"
                     /calculated_mol_wt=99621
     Region          1..339
                     /region_name="Stonin2_N"
                     /note="Stonin 2; pfam12016"
                     /db_xref="CDD:403289"
     Region          558..875
                     /region_name="AP_stonin-2_MHD"
                     /note="Mu homology domain (MHD) of adaptor-like protein
                     (AP-like), stonin-2; cd09263"
                     /db_xref="CDD:271169"
     CDS             1..897
                     /gene="STON2"
                     /coded_by="XM_061156503.1:260..2953"
                     /db_xref="GeneID:133065955"
ORIGIN      
        1 mttldhviat hqsewvsfne eplfpipseg gpkeqvpgas sssdqsesss gehhvldggs
       61 qdlshsehdd sseklglise aasppgsper rppdlvsais swvqfeddap wassspppke
      121 aggtatsltm pcwtcpsfds lrrcplpses swttrsedts spsfgpsytd lqlvsageqs
      181 glasgadstd nssslqedee vemeaiswqa gspavnghpa tpvtsarfps wvtfddnevs
      241 splspitspl kpetpplasv tpdgpynsag sfkkrerpks tlmnfskvqk ldvssvshpp
      301 avpeappwra tnpflnetlq dvqpspinpf raffeeqerr aqnssvsgtp gksqrdsliv
      361 vyrdaisfdd ssrsqsrsda veklkrlqie dsdhvggatl pdddptawte ldedpagseq
      421 spprdgwpmm lripekknim ssrhwgpiyv kltaggylql yyeqglerpf refklemche
      481 iseprlqnyd engrihslri drvtykekkk yqpkpavahs aereqviklg ttnyedflsf
      541 iravqdrlme lpvlsmelst vglnyleeem tvdvqdefsg lvskgdnqil qhrvltrvhv
      601 lsflsglaec rlglndvlvk gnevvsrqdi vpttttkwir lhecrfhgcv dedvfrssrv
      661 ilfnpldacr felmrfrtvf aektlpftlr taasihgaev evqswlrmsa gfssnwdplt
      721 qvpcenvmvr ypvpsewvkn frresvlgek slkakvnrga sfgsasisgs epvmrvtlgt
      781 akyehafnai vwrinrlpdk nsasghphcf fchlelgsdr evpsrfanhv nvefsmptts
      841 askaavrsis vedktdvrkw vnysahysyk veieqkkslk ldlegddlen pkecgvq
//
LOCUS       XP_061012487             376 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription initiation factor IIA subunit 1 isoform X1 [Dama
            dama].
ACCESSION   XP_061012487
VERSION     XP_061012487.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156504.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..376
                     /product="transcription initiation factor IIA subunit 1
                     isoform X1"
                     /calculated_mol_wt=41350
     Region          13..376
                     /region_name="TFIIA"
                     /note="Transcription factor IIA, alpha/beta subunit;
                     pfam03153"
                     /db_xref="CDD:460829"
     CDS             1..376
                     /gene="GTF2A1"
                     /coded_by="XM_061156504.1:439..1569"
                     /db_xref="GeneID:133065956"
ORIGIN      
        1 mansantntv pklyrsvied vindvrdifl ddgvdeqvlm elktlwenkl mqsravdgfh
       61 seeqqlllqv qqqhqpqqqq hhhhhhhqqa qpqqtvpqqa qaqqvlipas qqaaapqviv
      121 pdskliqhmn asnmsaaata atlalpagvt pvqqiltnsg qllqvvraan gaqyifqpqq
      181 svvlqqqvip qmqpggvqap viqqvlaplp ggispqtgvi iqpqqilftg nktqvipttv
      241 aaptpaqaqi tatgqqqpqa qpaqqqaplv lqvdgtgdts seededeeed ydddeeedke
      301 kdgaedgqve eeplnseddv sdeegqelfd tenvvvcqyd kihrsknkwk fhlkdgimnl
      361 ngrdyifska igdaew
//
LOCUS       XP_061012489             342 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription initiation factor IIA subunit 1 isoform X2 [Dama
            dama].
ACCESSION   XP_061012489
VERSION     XP_061012489.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156506.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..342
                     /product="transcription initiation factor IIA subunit 1
                     isoform X2"
                     /calculated_mol_wt=37389
     Region          116..342
                     /region_name="TFIIA"
                     /note="Transcription factor IIA, alpha/beta subunit;
                     pfam03153"
                     /db_xref="CDD:460829"
     CDS             1..342
                     /gene="GTF2A1"
                     /coded_by="XM_061156506.1:441..1469"
                     /db_xref="GeneID:133065956"
ORIGIN      
        1 mansantntv lwenklmqsr avdgfhseeq qlllqvqqqh qpqqqqhhhh hhhqqaqpqq
       61 tvpqqaqaqq vlipasqqaa apqvivpdsk liqhmnasnm saaataatla lpagvtpvqq
      121 iltnsgqllq vvraangaqy ifqpqqsvvl qqqvipqmqp ggvqapviqq vlaplpggis
      181 pqtgviiqpq qilftgnktq vipttvaapt paqaqitatg qqqpqaqpaq qqaplvlqvd
      241 gtgdtsseed edeeedyddd eeedkekdga edgqveeepl nseddvsdee gqelfdtenv
      301 vvcqydkihr sknkwkfhlk dgimnlngrd yifskaigda ew
//
LOCUS       XP_061012490            1101 aa            linear   MAM 02-DEC-2023
DEFINITION  centrosomal protein of 128 kDa [Dama dama].
ACCESSION   XP_061012490
VERSION     XP_061012490.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156507.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1101
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1101
                     /product="centrosomal protein of 128 kDa"
                     /calculated_mol_wt=129040
     Region          180..957
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1101
                     /gene="CEP128"
                     /coded_by="XM_061156507.1:181..3486"
                     /db_xref="GeneID:133065958"
ORIGIN      
        1 maesssdsdh frsrdrlsrw aassvhrevr hrptvgvtek vntitstlqd tsrnlrqvdq
       61 mlghyreynn gqagaiehlk esleqsigql rsqrlsrnsg grsisvtsls tsdldggtvt
      121 esyrfqptsp lkdygdqqgi krnksrtgvr fvpdtddvgq fhafhqslrd lsseqvrlgd
      181 dfnrelarrs rsdaatrral eelteklnea qkqdvvsdrv errlqeieke mrterelver
      241 rqdqlglisq qlqealkkqe akaeenegem knklrqtese ksklqqelel srrllnqseg
      301 sretllhqve elrtqlmkae vdpkglhhqv sqisrqqssl qdeqgddwrf rrgveredle
      361 kqmsdlrvql nfsamasele evkrclerkd kekvhlaaqv enlthelenr ekqqlemlde
      421 lkeiqkhfet cdakhkradl qitkltqhae eatkqaeqyl lelqqseglr qeaekrreel
      481 klkaqesirq wklkhkkler alekqsesld qlsdknnqil kekdelksql yaalqqiesl
      541 rkelndvltk ralqeeelhc keqklsdvks hqadlelevk dsldtihrle selkkqnkiq
      601 sqlkaekahl eeqiaelkes qakdkaqlle mqeaikdlsa iradlankla eeqrarkevl
      661 knlsdlrtea kskdeetati itqlklerni hqreledlts slqsvktkhe qniqelmkhf
      721 kkekseaenh irtlkaesle dknmakvhrc qleklksqyd rlteeltqne nenkklklky
      781 qclkdeleek ekhitneeeh rrrmeearlq lkdqllclet eqesilgvig keidaacktf
      841 srdsmdklkv fssspdtnyd phrwlaeskt klqwlceelk erenrekslr hqlmlcrqql
      901 knmtenkeae lqclfeqier qeqlleeihr ekrdlleeth rkdeemeslq drvnaletst
      961 rvaldhlesv peklslledf kgfrgsrsls dridgrysky rvhreslqqc rddpkhriqs
     1021 fkddrnfaes shahgldqss cwqdhsrfls sprfshlnsf tqrtvapdsp sikedapsll
     1081 mdgrspqprk eeyesknski f
//
LOCUS       XP_061012491             265 aa            linear   MAM 02-DEC-2023
DEFINITION  type II iodothyronine deiodinase [Dama dama].
ACCESSION   XP_061012491
VERSION     XP_061012491.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156508.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..265
                     /product="type II iodothyronine deiodinase"
                     /calculated_mol_wt=29559
     Region          4..262
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
     CDS             1..265
                     /gene="DIO2"
                     /coded_by="XM_061156508.1:1..798"
                     /db_xref="GeneID:133065959"
ORIGIN      
        1 mgilsvdlli tlqilpvffs nclflalyds villkhvvll lsrsksargq wrrmltsegm
       61 rciwksflld aykqvklged apnssvvhvs npeggdasgn gaqakavdgt echlldfasp
      121 erplvvnfgs atuppftnql pafsklveef ssvadfllvy ideahpsdgw avpgdsslff
      181 eikkhrnqed rcaaahqlle rfslppqcrv vadrmdnnan vaygvaferv civqrqkiay
      241 lggkgpffyn lqevrrwlek nfsqr
//
LOCUS       XP_061012492            1628 aa            linear   MAM 02-DEC-2023
DEFINITION  neurexin 3 isoform X1 [Dama dama].
ACCESSION   XP_061012492
VERSION     XP_061012492.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156509.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1628
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1628
                     /product="neurexin 3 isoform X1"
                     /calculated_mol_wt=178127
     Region          35..181
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cd00110"
                     /db_xref="CDD:238058"
     Region          202..232
                     /region_name="EGF"
                     /note="EGF-like domain; pfam00008"
                     /db_xref="CDD:394967"
     Region          281..420
                     /region_name="LamG"
                     /note="Laminin G domain; smart00282"
                     /db_xref="CDD:214598"
     Region          477..626
                     /region_name="LamG"
                     /note="Laminin G domain; smart00282"
                     /db_xref="CDD:214598"
     Region          654..687
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          715..840
                     /region_name="LamG"
                     /note="Laminin G domain; smart00282"
                     /db_xref="CDD:214598"
     Region          897..1025
                     /region_name="Laminin_G_2"
                     /note="Laminin G domain; pfam02210"
                     /db_xref="CDD:460494"
     Region          1089..1238
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cd00110"
                     /db_xref="CDD:238058"
     Region          1574..1592
                     /region_name="4.1m"
                     /note="putative band 4.1 homologues' binding motif;
                     smart00294"
                     /db_xref="CDD:128590"
     CDS             1..1628
                     /gene="NRXN3"
                     /coded_by="XM_061156509.1:1..4887"
                     /db_xref="GeneID:133065960"
ORIGIN      
        1 msftmhsvff tlkvslllgs llglclglef mglpnqwary lrwdastrsd lsfqfktnvs
       61 aglllylddg gvcdflclsl vdgrvqlrls mdcaetavls gtrvddsswh fvmvsrdrlr
      121 tvlvldgegr aaelqpqrpy mdvvsdlflg gvpadirpsa ltldgvqavp gfkglisdlk
      181 ygnseprllg sqgvqldaeg pcgerpceng gicflldghp tcdcsttgyg gklcseeshp
      241 mdgpahllns qareenvatf rgseylcydl sqnpiqsssd eitlsfktwq rnglilhtgk
      301 sadyvnlalk dgavslvinl gsgafeaive pvngkfndna whdvkvtrnl rqhsgigham
      361 vtisvdgilt ttgytqedyt mlgsddffyv ggspstadlp gspvsnnfmg clrevvyknn
      421 dirlelsrla rigdtkmkiy gevvfkcenv atldpinfet peayislpkw ntkrmgsisf
      481 dfrttepngl ilfthgkpqe rkdarsqknt kvdffavell dgnlyllldm gsgtikvkat
      541 qkkandgewy hvdiqrdgrs gtisvnsrrt pftasgesei ldlegdmylg glpenragli
      601 lptelwtaml nygyvgcird lfidgrskni rqlaemqnaa gvksscsrms akqcdsypck
      661 nnavckdgwn rficdctgtg ywgrtcerea silsydgsmy mkiimpmvmh teaedvsfrf
      721 msqraygllv attsrdsadt lrleldggrv klmvnlgkgp etlyagqkln dnewhtvrvv
      781 rrgkslkltv dddvaegtmv gdhtrlefhn ietgimtekr yisvvpssfi ghlqslmfng
      841 llyidlckng didycelkar fglrniiadp vtfktkssyl slatlqayts mhlffqfktt
      901 sadgfilfns gdgndfiave lvkgyihyvf dlgngpnvik gnsdrplndn qwhnvvitrd
      961 nsnthslkvd tkvvtqving aknldlkgdl ymaglaqgmy snlpklvasr dgfqgclasv
     1021 dlngrlpdli ndalhrsgqi ergcegpstt cqedscanqg vcmqqwegft cdcsmtsysg
     1081 nqcndpgaty ifgksgglil ytwpandrps trsdrlavgf sttvkdgilv ridsapglgd
     1141 flqlhieqgk igvvfnigtv disikeertp vndgkyhvvr ftrnggnatl qvdnwpvneh
     1201 yptgrqltif ntqaqiaigg kdkgrlfqgq lsglyydglk vlnmaaennp nikingsvrl
     1261 vgevpsilgt tqttsmppem sttvmetttt mattttrknr stairdsnap tsddlvssae
     1321 cssddedfve cepstggelv ipllvedpla tppiatraps itlpptfrpl ltiiettkds
     1381 lsltseaglp clsdqgsdgc dddglvisgy gsgetfdsnl pptddedfyt tfslvtdksl
     1441 stsifeggyk ahapnrtttt slspelirft assssgmvpk lpagkmnnre lkpqpdlvll
     1501 plptayelds tklksplits pmfrnvptan ptepgvrrvp gaseviress sttgmvvgiv
     1561 aaaalcilil lyamykyrnr degsyqvdet rnyisnsaqs ngtllkekpp sskgghkkqk
     1621 nkdkeyyv
//
LOCUS       XP_061012493            1471 aa            linear   MAM 02-DEC-2023
DEFINITION  neurexin 3 isoform X2 [Dama dama].
ACCESSION   XP_061012493
VERSION     XP_061012493.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156510.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1471
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1471
                     /product="neurexin 3 isoform X2"
                     /calculated_mol_wt=162105
     Region          35..181
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cd00110"
                     /db_xref="CDD:238058"
     Region          202..232
                     /region_name="EGF"
                     /note="EGF-like domain; pfam00008"
                     /db_xref="CDD:394967"
     Region          286..417
                     /region_name="LamG"
                     /note="Laminin G domain; smart00282"
                     /db_xref="CDD:214598"
     Region          474..623
                     /region_name="LamG"
                     /note="Laminin G domain; smart00282"
                     /db_xref="CDD:214598"
     Region          651..684
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          712..846
                     /region_name="LamG"
                     /note="Laminin G domain; smart00282"
                     /db_xref="CDD:214598"
     Region          903..1031
                     /region_name="Laminin_G_2"
                     /note="Laminin G domain; pfam02210"
                     /db_xref="CDD:460494"
     Region          1095..1274
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cd00110"
                     /db_xref="CDD:238058"
     Region          1417..1435
                     /region_name="4.1m"
                     /note="putative band 4.1 homologues' binding motif;
                     smart00294"
                     /db_xref="CDD:128590"
     CDS             1..1471
                     /gene="NRXN3"
                     /coded_by="XM_061156510.1:1..4416"
                     /db_xref="GeneID:133065960"
ORIGIN      
        1 msftmhsvff tlkvslllgs llglclglef mglpnqwary lrwdastrsd lsfqfktnvs
       61 aglllylddg gvcdflclsl vdgrvqlrls mdcaetavls gtrvddsswh fvmvsrdrlr
      121 tvlvldgegr aaelqpqrpy mdvvsdlflg gvpadirpsa ltldgvqavp gfkglisdlk
      181 ygnseprllg sqgvqldaeg pcgerpceng gicflldghp tcdcsttgyg gklcsedvsq
      241 gpglshlmms eqgrskaree nvatfrgsey lcydlsqnpi qsssdeitls fktwqrngli
      301 lhtgksadyv nlalkdgavs lvinlgsgaf eaivepvngk fndnawhdvk vtrnlrqvti
      361 svdgiltttg ytqedytmlg sddffyvggs pstadlpgsp vsnnfmgclr evvyknndir
      421 lelsrlarig dtkmkiygev vfkcenvatl dpinfetpea yislpkwntk rmgsisfdfr
      481 ttepnglilf thgkpqerkd arsqkntkvd ffavelldgn lyllldmgsg tikvkatqkk
      541 andgewyhvd iqrdgrsgti svnsrrtpft asgeseildl egdmylgglp enraglilpt
      601 elwtamlnyg yvgcirdlfi dgrsknirql aemqnaagvk sscsrmsakq cdsypcknna
      661 vckdgwnrfi cdctgtgywg rtcereasil sydgsmymki impmvmhtea edvsfrfmsq
      721 raygllvatt srdsadtlrl eldggrvklm vnldcirinc nsskgpetly agqklndnew
      781 htvrvvrrgk slkltvdddv aegtmvgdht rlefhnietg imtekryisv vpssfighlq
      841 slmfngllyi dlckngdidy celkarfglr niiadpvtfk tkssylslat lqaytsmhlf
      901 fqfkttsadg filfnsgdgn dfiavelvkg yihyvfdlgn gpnvikgnsd rplndnqwhn
      961 vvitrdnsnt hslkvdtkvv tqvingaknl dlkgdlymag laqgmysnlp klvasrdgfq
     1021 gclasvdlng rlpdlindal hrsgqiergc egpsttcqed scanqgvcmq qwegftcdcs
     1081 mtsysgnqcn dpgatyifgk sgglilytwp andrpstrsd rlavgfsttv kdgilvrids
     1141 apglgdflql hieqgkigvv fnigtvdisi keertpvndg kyhvvrftrn ggnatlqvdn
     1201 wpvnehyptg ntdnerfqmv kqkipfkynr pveewlqekg rqltifntqa qiaiggkdkg
     1261 rlfqgqlsgl yydglkvlnm aaennpniki ngsvrlvgev psilgttqtt smppemsttv
     1321 mettttmatt ttrknrstas iqptsddlvs saecssdded fvecepstgr lanptepgvr
     1381 rvpgasevir esssttgmvv givaaaalci lillyamyky rnrdegsyqv detrnyisns
     1441 aqsngtllke kppsskgghk kqknkdkeyy v
//
LOCUS       XP_061012494            1498 aa            linear   MAM 02-DEC-2023
DEFINITION  neurexin 3 isoform X3 [Dama dama].
ACCESSION   XP_061012494
VERSION     XP_061012494.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156511.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1498
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1498
                     /product="neurexin 3 isoform X3"
                     /calculated_mol_wt=164541
     Region          35..181
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cd00110"
                     /db_xref="CDD:238058"
     Region          202..232
                     /region_name="EGF"
                     /note="EGF-like domain; pfam00008"
                     /db_xref="CDD:394967"
     Region          305..444
                     /region_name="LamG"
                     /note="Laminin G domain; smart00282"
                     /db_xref="CDD:214598"
     Region          501..650
                     /region_name="LamG"
                     /note="Laminin G domain; smart00282"
                     /db_xref="CDD:214598"
     Region          678..711
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          739..873
                     /region_name="LamG"
                     /note="Laminin G domain; smart00282"
                     /db_xref="CDD:214598"
     Region          930..1058
                     /region_name="Laminin_G_2"
                     /note="Laminin G domain; pfam02210"
                     /db_xref="CDD:460494"
     Region          1122..1301
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cd00110"
                     /db_xref="CDD:238058"
     Region          1444..1462
                     /region_name="4.1m"
                     /note="putative band 4.1 homologues' binding motif;
                     smart00294"
                     /db_xref="CDD:128590"
     CDS             1..1498
                     /gene="NRXN3"
                     /coded_by="XM_061156511.1:1..4497"
                     /db_xref="GeneID:133065960"
ORIGIN      
        1 msftmhsvff tlkvslllgs llglclglef mglpnqwary lrwdastrsd lsfqfktnvs
       61 aglllylddg gvcdflclsl vdgrvqlrls mdcaetavls gtrvddsswh fvmvsrdrlr
      121 tvlvldgegr aaelqpqrpy mdvvsdlflg gvpadirpsa ltldgvqavp gfkglisdlk
      181 ygnseprllg sqgvqldaeg pcgerpceng gicflldghp tcdcsttgyg gklcseeshp
      241 mdgpavleln ssgsllfspf ggggggagpv hqdihgeqen vatfrgseyl cydlsqnpiq
      301 sssdeitlsf ktwqrnglil htgksadyvn lalkdgavsl vinlgsgafe aivepvngkf
      361 ndnawhdvkv trnlrqhsgi ghamvtisvd giltttgytq edytmlgsdd ffyvggspst
      421 adlpgspvsn nfmgclrevv yknndirlel srlarigdtk mkiygevvfk cenvatldpi
      481 nfetpeayis lpkwntkrmg sisfdfrtte pnglilfthg kpqerkdars qkntkvdffa
      541 velldgnlyl lldmgsgtik vkatqkkand gewyhvdiqr dgrsgtisvn srrtpftasg
      601 eseildlegd mylgglpenr aglilptelw tamlnygyvg cirdlfidgr sknirqlaem
      661 qnaagvkssc srmsakqcds ypcknnavck dgwnrficdc tgtgywgrtc ereasilsyd
      721 gsmymkiimp mvmhteaedv sfrfmsqray gllvattsrd sadtlrleld ggrvklmvnl
      781 dcirincnss kgpetlyagq klndnewhtv rvvrrgkslk ltvdddvaeg tmvgdhtrle
      841 fhnietgimt ekryisvvps sfighlqslm fngllyidlc kngdidycel karfglrnii
      901 adpvtfktks sylslatlqa ytsmhlffqf kttsadgfil fnsgdgndfi avelvkgyih
      961 yvfdlgngpn vikgnsdrpl ndnqwhnvvi trdnsnthsl kvdtkvvtqv ingaknldlk
     1021 gdlymaglaq gmysnlpklv asrdgfqgcl asvdlngrlp dlindalhrs gqiergcegp
     1081 sttcqedsca nqgvcmqqwe gftcdcsmts ysgnqcndpg atyifgksgg lilytwpand
     1141 rpstrsdrla vgfsttvkdg ilvridsapg lgdflqlhie qgkigvvfni gtvdisikee
     1201 rtpvndgkyh vvrftrnggn atlqvdnwpv nehyptgntd nerfqmvkqk ipfkynrpve
     1261 ewlqekgrql tifntqaqia iggkdkgrlf qgqlsglyyd glkvlnmaae nnpnikings
     1321 vrlvgevpsi lgttqttsmp pemsttvmet tttmattttr knrstairds naptsddlvs
     1381 saecssdded fvecepstan ptepgvrrvp gaseviress sttgmvvgiv aaaalcilil
     1441 lyamykyrnr degsyqvdet rnyisnsaqs ngtllkekpp sskgghkkqk nkdkeyyv
//
LOCUS       XP_061012495            1061 aa            linear   MAM 02-DEC-2023
DEFINITION  neurexin 3 isoform X4 [Dama dama].
ACCESSION   XP_061012495
VERSION     XP_061012495.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156512.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1061
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1061
                     /product="neurexin 3 isoform X4"
                     /calculated_mol_wt=117022
     Region          <1..40
                     /region_name="LamG"
                     /note="Laminin G domain; smart00282"
                     /db_xref="CDD:214598"
     Region          97..246
                     /region_name="LamG"
                     /note="Laminin G domain; smart00282"
                     /db_xref="CDD:214598"
     Region          274..307
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          335..469
                     /region_name="LamG"
                     /note="Laminin G domain; smart00282"
                     /db_xref="CDD:214598"
     Region          526..654
                     /region_name="Laminin_G_2"
                     /note="Laminin G domain; pfam02210"
                     /db_xref="CDD:460494"
     Region          718..867
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cd00110"
                     /db_xref="CDD:238058"
     Region          987..>1022
                     /region_name="Syndecan"
                     /note="Syndecan domain; pfam01034"
                     /db_xref="CDD:460035"
     Region          1007..1025
                     /region_name="4.1m"
                     /note="putative band 4.1 homologues' binding motif;
                     smart00294"
                     /db_xref="CDD:128590"
     CDS             1..1061
                     /gene="NRXN3"
                     /coded_by="XM_061156512.1:42..3227"
                     /db_xref="GeneID:133065960"
ORIGIN      
        1 mlgsddffyv ggspstadlp gspvsnnfmg clrevvyknn dirlelsrla rigdtkmkiy
       61 gevvfkcenv atldpinfet peayislpkw ntkrmgsisf dfrttepngl ilfthgkpqe
      121 rkdarsqknt kvdffavell dgnlyllldm gsgtikvkat qkkandgewy hvdiqrdgrs
      181 gtisvnsrrt pftasgesei ldlegdmylg glpenragli lptelwtaml nygyvgcird
      241 lfidgrskni rqlaemqnaa gvksscsrms akqcdsypck nnavckdgwn rficdctgtg
      301 ywgrtcerea silsydgsmy mkiimpmvmh teaedvsfrf msqraygllv attsrdsadt
      361 lrleldggrv klmvnldcir incnsskgpe tlyagqklnd newhtvrvvr rgkslkltvd
      421 ddvaegtmvg dhtrlefhni etgimtekry isvvpssfig hlqslmfngl lyidlckngd
      481 idycelkarf glrniiadpv tfktkssyls latlqaytsm hlffqfktts adgfilfnsg
      541 dgndfiavel vkgyihyvfd lgngpnvikg nsdrplndnq whnvvitrdn snthslkvdt
      601 kvvtqvinga knldlkgdly maglaqgmys nlpklvasrd gfqgclasvd lngrlpdlin
      661 dalhrsgqie rgcegpsttc qedscanqgv cmqqwegftc dcsmtsysgn qcndpgatyi
      721 fgksgglily twpandrpst rsdrlavgfs ttvkdgilvr idsapglgdf lqlhieqgki
      781 gvvfnigtvd isikeertpv ndgkyhvvrf trnggnatlq vdnwpvnehy ptgrqltifn
      841 tqaqiaiggk dkgrlfqgql sglyydglkv lnmaaennpn ikingsvrlv gevpsilgtt
      901 qttsmppems ttvmettttm attttrknrs tasiqptsdd lvssaecssd dedfveceps
      961 tanptepgvr rvpgasevir esssttgmvv givaaaalci lillyamyky rnrdegsyqv
     1021 detrnyisns aqsngtllke kppsskgghk kqknkdkeyy v
//
LOCUS       XP_061012496             637 aa            linear   MAM 02-DEC-2023
DEFINITION  neurexin 3 isoform X5 [Dama dama].
ACCESSION   XP_061012496
VERSION     XP_061012496.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156513.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..637
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..637
                     /product="neurexin 3 isoform X5"
                     /calculated_mol_wt=68916
     Region          86..235
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cd00110"
                     /db_xref="CDD:238058"
     Region          563..>598
                     /region_name="Syndecan"
                     /note="Syndecan domain; pfam01034"
                     /db_xref="CDD:460035"
     Region          583..601
                     /region_name="4.1m"
                     /note="putative band 4.1 homologues' binding motif;
                     smart00294"
                     /db_xref="CDD:128590"
     CDS             1..637
                     /gene="NRXN3"
                     /coded_by="XM_061156513.1:97..2010"
                     /db_xref="GeneID:133065960"
ORIGIN      
        1 mhlriharrs pprrpawtlg iwslfwgciv ssvwsssnva sssssssspg shsqhehhfh
       61 gskhhsvpis iyrspvslrg ghagatyifg ksgglilytw pandrpstrs drlavgfstt
      121 vkdgilvrid sapglgdflq lhieqgkigv vfnigtvdis ikeertpvnd gkyhvvrftr
      181 nggnatlqvd nwpvnehypt grqltifntq aqiaiggkdk grlfqgqlsg lyydglkvln
      241 maaennpnik ingsvrlvge vpsilgttqt tsmppemstt vmettttmat tttrknrsta
      301 siqptsddlv ssaecssdde dfvecepstg gelvipllve dplatppiat rapsitlppt
      361 frplltiiet tkdslsltse aglpclsdqg sdgcdddglv isgygsgetf dsnlpptdde
      421 dfyttfslvt dkslstsife ggykahapkw eskdfrpnka setsrtttts lspelirfta
      481 ssssgmvpkl pagkmnnrel kpqpdlvllp lptayeldst klksplitsp mfrnvptanp
      541 tepgvrrvpg aseviresss ttgmvvgiva aaalcilill yamykyrnrd egsyqvdetr
      601 nyisnsaqsn gtllkekpps skgghkkqkn kdkeyyv
//
LOCUS       XP_061012497             432 aa            linear   MAM 02-DEC-2023
DEFINITION  neurexin 3 isoform X6 [Dama dama].
ACCESSION   XP_061012497
VERSION     XP_061012497.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156514.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..432
                     /product="neurexin 3 isoform X6"
                     /calculated_mol_wt=46939
     Region          86..235
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cd00110"
                     /db_xref="CDD:238058"
     Region          358..>393
                     /region_name="Syndecan"
                     /note="Syndecan domain; pfam01034"
                     /db_xref="CDD:460035"
     Region          378..396
                     /region_name="4.1m"
                     /note="putative band 4.1 homologues' binding motif;
                     smart00294"
                     /db_xref="CDD:128590"
     CDS             1..432
                     /gene="NRXN3"
                     /coded_by="XM_061156514.1:97..1395"
                     /db_xref="GeneID:133065960"
ORIGIN      
        1 mhlriharrs pprrpawtlg iwslfwgciv ssvwsssnva sssssssspg shsqhehhfh
       61 gskhhsvpis iyrspvslrg ghagatyifg ksgglilytw pandrpstrs drlavgfstt
      121 vkdgilvrid sapglgdflq lhieqgkigv vfnigtvdis ikeertpvnd gkyhvvrftr
      181 nggnatlqvd nwpvnehypt grqltifntq aqiaiggkdk grlfqgqlsg lyydglkvln
      241 maaennpnik ingsvrlvge vpsilgttqt tsmppemstt vmettttmat tttrknrsta
      301 siqptsddlv ssaecssdde dfvecepstg rlanptepgv rrvpgasevi resssttgmv
      361 vgivaaaalc ilillyamyk yrnrdegsyq vdetrnyisn saqsngtllk ekppsskggh
      421 kkqknkdkey yv
//
LOCUS       XP_061012498             523 aa            linear   MAM 02-DEC-2023
DEFINITION  aarF domain-containing protein kinase 1 isoform X1 [Dama dama].
ACCESSION   XP_061012498
VERSION     XP_061012498.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156515.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..523
                     /product="aarF domain-containing protein kinase 1 isoform
                     X1"
                     /calculated_mol_wt=59601
     Region          117..369
                     /region_name="ADCK1-like"
                     /note="aarF domain containing kinase 1 and similar
                     proteins; cd13969"
                     /db_xref="CDD:270871"
     Site            order(167..171,173,183,185,244,263..266,308,312..313,315,
                     330..331)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:270871"
     CDS             1..523
                     /gene="ADCK1"
                     /coded_by="XM_061156515.1:133..1704"
                     /db_xref="GeneID:133065962"
ORIGIN      
        1 marrvlklas wtsmalaasg vclysnkyld pndfgavrvg ravattavis ydyltslrsv
       61 pygseeylql rskvhlrsar rlcelccanr gtfikvgqhl galdyllpee ytstlkvlhs
      121 qapqssmkev rqviredlgk eihdlflsfd dtplgaasla qvhkavlrdg rtvavkvqhp
      181 kvqaqsskdi llmevlvlav kqlfpefefm wlvdeakknl pleldflneg rnaekvaqml
      241 khfdflkvpr iywelstkrv llmefvdggq vndrhymern kidvneisrh lgrmysemif
      301 vngfvhcdph pgnvlvrkrp dtgkveivll dhglyqalte efrldycrlw qsliwtdmqs
      361 vrkygqrlga gdlyplfacm ltarswdavn rgigqtpvta tedseirnha anylpqisql
      421 lnrvprqmll ifktndllrg ieaalgtras assflnmsrc ciralaahkk qktrslfrra
      481 rislreafsl wkinlhelvl hvkglrltgw vwallcwllp aph
//
LOCUS       XP_061012499             523 aa            linear   MAM 02-DEC-2023
DEFINITION  aarF domain-containing protein kinase 1 isoform X1 [Dama dama].
ACCESSION   XP_061012499
VERSION     XP_061012499.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156516.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..523
                     /product="aarF domain-containing protein kinase 1 isoform
                     X1"
                     /calculated_mol_wt=59601
     Region          117..369
                     /region_name="ADCK1-like"
                     /note="aarF domain containing kinase 1 and similar
                     proteins; cd13969"
                     /db_xref="CDD:270871"
     Site            order(167..171,173,183,185,244,263..266,308,312..313,315,
                     330..331)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:270871"
     CDS             1..523
                     /gene="ADCK1"
                     /coded_by="XM_061156516.1:250..1821"
                     /db_xref="GeneID:133065962"
ORIGIN      
        1 marrvlklas wtsmalaasg vclysnkyld pndfgavrvg ravattavis ydyltslrsv
       61 pygseeylql rskvhlrsar rlcelccanr gtfikvgqhl galdyllpee ytstlkvlhs
      121 qapqssmkev rqviredlgk eihdlflsfd dtplgaasla qvhkavlrdg rtvavkvqhp
      181 kvqaqsskdi llmevlvlav kqlfpefefm wlvdeakknl pleldflneg rnaekvaqml
      241 khfdflkvpr iywelstkrv llmefvdggq vndrhymern kidvneisrh lgrmysemif
      301 vngfvhcdph pgnvlvrkrp dtgkveivll dhglyqalte efrldycrlw qsliwtdmqs
      361 vrkygqrlga gdlyplfacm ltarswdavn rgigqtpvta tedseirnha anylpqisql
      421 lnrvprqmll ifktndllrg ieaalgtras assflnmsrc ciralaahkk qktrslfrra
      481 rislreafsl wkinlhelvl hvkglrltgw vwallcwllp aph
//
LOCUS       XP_061012500             479 aa            linear   MAM 02-DEC-2023
DEFINITION  aarF domain-containing protein kinase 1 isoform X2 [Dama dama].
ACCESSION   XP_061012500
VERSION     XP_061012500.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156517.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..479
                     /product="aarF domain-containing protein kinase 1 isoform
                     X2"
                     /calculated_mol_wt=54918
     Region          73..325
                     /region_name="ADCK1-like"
                     /note="aarF domain containing kinase 1 and similar
                     proteins; cd13969"
                     /db_xref="CDD:270871"
     Site            order(123..127,129,139,141,200,219..222,264,268..269,271,
                     286..287)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:270871"
     CDS             1..479
                     /gene="ADCK1"
                     /coded_by="XM_061156517.1:287..1726"
                     /db_xref="GeneID:133065962"
ORIGIN      
        1 mtavisydyl tslrsvpygs eeylqlrskv hlrsarrlce lccanrgtfi kvgqhlgald
       61 yllpeeytst lkvlhsqapq ssmkevrqvi redlgkeihd lflsfddtpl gaaslaqvhk
      121 avlrdgrtva vkvqhpkvqa qsskdillme vlvlavkqlf pefefmwlvd eakknlplel
      181 dflnegrnae kvaqmlkhfd flkvpriywe lstkrvllme fvdggqvndr hymernkidv
      241 neisrhlgrm ysemifvngf vhcdphpgnv lvrkrpdtgk veivlldhgl yqalteefrl
      301 dycrlwqsli wtdmqsvrky gqrlgagdly plfacmltar swdavnrgig qtpvtateds
      361 eirnhaanyl pqisqllnrv prqmllifkt ndllrgieaa lgtrasassf lnmsrccira
      421 laahkkqktr slfrrarisl reafslwkin lhelvlhvkg lrltgwvwal lcwllpaph
//
LOCUS       XP_061012502             397 aa            linear   MAM 02-DEC-2023
DEFINITION  aarF domain-containing protein kinase 1 isoform X3 [Dama dama].
ACCESSION   XP_061012502
VERSION     XP_061012502.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156519.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..397
                     /product="aarF domain-containing protein kinase 1 isoform
                     X3"
                     /calculated_mol_wt=45671
     Region          1..243
                     /region_name="ADCK1-like"
                     /note="aarF domain containing kinase 1 and similar
                     proteins; cd13969"
                     /db_xref="CDD:270871"
     Site            order(41..45,47,57,59,118,137..140,182,186..187,189,
                     204..205)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:270871"
     CDS             1..397
                     /gene="ADCK1"
                     /coded_by="XM_061156519.1:344..1537"
                     /db_xref="GeneID:133065962"
ORIGIN      
        1 mkevrqvire dlgkeihdlf lsfddtplga aslaqvhkav lrdgrtvavk vqhpkvqaqs
       61 skdillmevl vlavkqlfpe fefmwlvdea kknlpleldf lnegrnaekv aqmlkhfdfl
      121 kvpriywels tkrvllmefv dggqvndrhy mernkidvne isrhlgrmys emifvngfvh
      181 cdphpgnvlv rkrpdtgkve ivlldhglyq alteefrldy crlwqsliwt dmqsvrkygq
      241 rlgagdlypl facmltarsw davnrgigqt pvtatedsei rnhaanylpq isqllnrvpr
      301 qmllifktnd llrgieaalg trasassfln msrccirala ahkkqktrsl frrarislre
      361 afslwkinlh elvlhvkglr ltgwvwallc wllpaph
//
LOCUS       XP_061012503             536 aa            linear   MAM 02-DEC-2023
DEFINITION  SNW domain-containing protein 1 [Dama dama].
ACCESSION   XP_061012503
VERSION     XP_061012503.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156520.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..536
                     /product="SNW domain-containing protein 1"
                     /calculated_mol_wt=61491
     Region          178..334
                     /region_name="SKIP_SNW"
                     /note="SKIP/SNW domain; pfam02731"
                     /db_xref="CDD:460666"
     CDS             1..536
                     /gene="SNW1"
                     /coded_by="XM_061156520.1:71..1681"
                     /db_xref="GeneID:133065963"
ORIGIN      
        1 maltsflpap tqlsqdqlea eekarsqrsr qtslvssrre pppygyrkgw iprlledfgd
       61 ggafpeihva qypldmgrkk kmsnalaiqv daegkikyda iarqgqskdk viyskytdlv
      121 pkevmnaddp dlqrpdeeai keitektrva leksvsqkva aampvraadk lapaqyiryt
      181 psqqgvafns gakqrvirmv emqkdpmepp rfkinkkipr gppsppapvm hspsrkmtvk
      241 eqqewkippc isnwknakgy tipldkrlaa dgrglqtvhi nenfaklaea lyiadrkare
      301 avemraqver kmaqkekekh eeklremaqk arerragikt hvekedgear erdeirhdrr
      361 kerqhdrnls raapdkrskl qrnenrdise vialgvpnpr tsnevqydqr lfnqskgmds
      421 gfadgedeiy nvydqawrgg kdmvqniyrp sknldkdmyg ddleariktn rfvpdkefsg
      481 sdrrqrgreg pvqfeedpfg ldkfleeakq hggskrpsds srpkehehes kkrrke
//
LOCUS       XP_061012504             423 aa            linear   MAM 02-DEC-2023
DEFINITION  nucleic acid dioxygenase ALKBH1 isoform X1 [Dama dama].
ACCESSION   XP_061012504
VERSION     XP_061012504.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156521.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..423
                     /product="nucleic acid dioxygenase ALKBH1 isoform X1"
                     /calculated_mol_wt=46895
     Region          153..323
                     /region_name="2OG-FeII_Oxy"
                     /note="2OG-Fe(II) oxygenase superfamily; cl21496"
                     /db_xref="CDD:473886"
     CDS             1..423
                     /gene="ALKBH1"
                     /coded_by="XM_061156521.1:9..1280"
                     /db_xref="GeneID:133065964"
ORIGIN      
        1 mgkmaaavgs vatlaaepge dafrklfrfy rqsrpgtadl ggvidfsvsh aargtgpgap
       61 kvvksqlnls svsdhdalra glqpvskwqa yglqgypala hfvflshfgd shnisapppa
      121 krlqltkgsd dgfifisnpf lpgyqwhwvk qclklysrkp nvcnldkhmt keetqdlweq
      181 skeflrckev nkrrprslle klrwvtlgyh ynwdskrysa dhytpfpsdl aflseqvaaa
      241 cgfqgfraea gilnyyrlds tlgihvdrse ldhsrpllsf sfgqsaifll gglkrdeapt
      301 pmfmhsgdim vmsgfsrlln havprvlpsa egdslpgclg tplpadlprd svvepcsled
      361 wqvcasylkt arvnmtvrqv lavgqdfple pteenkrdit aegschlhgd nsqvkrarls
      421 pdy
//
LOCUS       XP_061012505             389 aa            linear   MAM 02-DEC-2023
DEFINITION  nucleic acid dioxygenase ALKBH1 isoform X2 [Dama dama].
ACCESSION   XP_061012505
VERSION     XP_061012505.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156522.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..389
                     /product="nucleic acid dioxygenase ALKBH1 isoform X2"
                     /calculated_mol_wt=43238
     Region          119..289
                     /region_name="2OG-FeII_Oxy"
                     /note="2OG-Fe(II) oxygenase superfamily; cl21496"
                     /db_xref="CDD:473886"
     CDS             1..389
                     /gene="ALKBH1"
                     /coded_by="XM_061156522.1:9..1178"
                     /db_xref="GeneID:133065964"
ORIGIN      
        1 mgkmaaavgs vatlaaepge dafrklfrfy rqsrpgtadl ggvidfsvsh aargtgpgap
       61 kvvksqlnls svsdhdalra glqpvskwqa yglqgypgfi fisnpflpgy qwhwvkqclk
      121 lysrkpnvcn ldkhmtkeet qdlweqskef lrckevnkrr prslleklrw vtlgyhynwd
      181 skrysadhyt pfpsdlafls eqvaaacgfq gfraeagiln yyrldstlgi hvdrseldhs
      241 rpllsfsfgq saifllgglk rdeaptpmfm hsgdimvmsg fsrllnhavp rvlpsaegds
      301 lpgclgtplp adlprdsvve pcsledwqvc asylktarvn mtvrqvlavg qdfpleptee
      361 nkrditaegs chlhgdnsqv krarlspdy
//
LOCUS       XP_061012506             378 aa            linear   MAM 02-DEC-2023
DEFINITION  nucleic acid dioxygenase ALKBH1 isoform X3 [Dama dama].
ACCESSION   XP_061012506
VERSION     XP_061012506.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156523.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..378
                     /product="nucleic acid dioxygenase ALKBH1 isoform X3"
                     /calculated_mol_wt=42005
     Region          108..278
                     /region_name="2OG-FeII_Oxy"
                     /note="2OG-Fe(II) oxygenase superfamily; cl21496"
                     /db_xref="CDD:473886"
     CDS             1..378
                     /gene="ALKBH1"
                     /coded_by="XM_061156523.1:9..1145"
                     /db_xref="GeneID:133065964"
ORIGIN      
        1 mgkmaaavgs vatlaaepge dafrklfrfy rqsrpgtadl ggvidfsvsh aargtgpgap
       61 kvvksqlnls svsdhdalra glqpvskwqa yglqgypgyq whwvkqclkl ysrkpnvcnl
      121 dkhmtkeetq dlweqskefl rckevnkrrp rslleklrwv tlgyhynwds krysadhytp
      181 fpsdlaflse qvaaacgfqg fraeagilny yrldstlgih vdrseldhsr pllsfsfgqs
      241 aifllgglkr deaptpmfmh sgdimvmsgf srllnhavpr vlpsaegdsl pgclgtplpa
      301 dlprdsvvep csledwqvca sylktarvnm tvrqvlavgq dfplepteen krditaegsc
      361 hlhgdnsqvk rarlspdy
//
LOCUS       XP_061012507             111 aa            linear   MAM 02-DEC-2023
DEFINITION  SRA stem-loop-interacting RNA-binding protein, mitochondrial [Dama
            dama].
ACCESSION   XP_061012507
VERSION     XP_061012507.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156524.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..111
                     /product="SRA stem-loop-interacting RNA-binding protein,
                     mitochondrial"
                     /calculated_mol_wt=12364
     Region          20..92
                     /region_name="RRM_SLIRP"
                     /note="RNA recognition motif (RRM) found in SRA
                     stem-loop-interacting RNA-binding protein (SLIRP) and
                     similar proteins; cd12242"
                     /db_xref="CDD:409688"
     CDS             1..111
                     /gene="SLIRP"
                     /coded_by="XM_061156524.1:55..390"
                     /db_xref="GeneID:133065965"
ORIGIN      
        1 maasaargam alrtnisrpv afvrkipwta asselrehfa qfghvrkctv pfdketgfhk
       61 gmgwihfsse eelhnalqqe nhvidgvklh vqpqkpkalq gdqtsdeekd f
//
LOCUS       XP_061012509             562 aa            linear   MAM 02-DEC-2023
DEFINITION  serine palmitoyltransferase 2 [Dama dama].
ACCESSION   XP_061012509
VERSION     XP_061012509.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156526.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..562
                     /product="serine palmitoyltransferase 2"
                     /calculated_mol_wt=62796
     Region          67..545
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     Site            order(176,237..239,263,315,319..320,344,346..347,376,379,
                     509)
                     /site_type="active"
                     /note="substrate-cofactor binding pocket [active]"
                     /db_xref="CDD:99747"
     Site            order(237..239,263,315,319,344,346..347,376,379)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]"
                     /db_xref="CDD:99747"
     Site            379
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99747"
     CDS             1..562
                     /gene="SPTLC2"
                     /coded_by="XM_061156526.1:113..1801"
                     /db_xref="GeneID:133065967"
ORIGIN      
        1 mrpdpggcfc crrpvransc vangevrngy vrssaaaaaa sagqihhvtq ngglykrpfn
       61 egfeetpmlv avltyvgygv ltlfgylrdf lrhwriekch hatereeqkd fvslyqdfen
      121 fytrnlymri rdnwnrpics vpgarvdime rqshdynwsf kytgnvikdv inmgsynylg
      181 farntgpcqe aaakvleeyg vgvcstrqei gnldkheele klvasflgve aamaygmgfa
      241 tnsmnipalv skgclilsde lnhaslvlga rlsgatirvf khnnmqslek llkdaivygq
      301 prtrrpwkki lilvegiysm egsivrlpev ialkkkykay lyldeahsig algptgrgvv
      361 dyfgldpedv dimmgtftks fgasggyigg kkalidylrt hshsavyats lsppvveqiv
      421 tsmkcimgqd gttlgkeciq qlaenvryfr rrlksmgfii ygnedspvvp lmlympakig
      481 afgremlkrn igvvvvgfpa tpiiesrarf clsaahtrem ldaalkeide vgdllhlkys
      541 rhrsvplldr pfdettyeet ed
//
LOCUS       XP_061012510             338 aa            linear   MAM 02-DEC-2023
DEFINITION  activator of 90 kDa heat shock protein ATPase homolog 1 isoform X1
            [Dama dama].
ACCESSION   XP_061012510
VERSION     XP_061012510.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156527.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..338
                     /product="activator of 90 kDa heat shock protein ATPase
                     homolog 1 isoform X1"
                     /calculated_mol_wt=38080
     Region          29..158
                     /region_name="Aha1_N"
                     /note="Activator of Hsp90 ATPase, N-terminal; smart01000"
                     /db_xref="CDD:214964"
     Region          208..333
                     /region_name="SRPBCC_Aha1"
                     /note="Putative hydrophobic ligand-binding SRPBCC domain
                     of the Hsp90 co-chaperone Aha1 and related proteins;
                     cd08892"
                     /db_xref="CDD:176901"
     Site            order(209,211,213,222..224,226..227,232,240,248,250,252,
                     254,256,258..259,261,264,270,272..273,286..287,289,291,
                     301,303,305,307,311..319,322..324,327)
                     /site_type="other"
                     /note="putative hydrophobic ligand binding site [chemical
                     binding]"
                     /db_xref="CDD:176901"
     Site            order(261,273,286,296..297)
                     /site_type="other"
                     /note="putative Hsp90 binding residues [polypeptide
                     binding]"
                     /db_xref="CDD:176901"
     CDS             1..338
                     /gene="AHSA1"
                     /coded_by="XM_061156527.1:148..1164"
                     /db_xref="GeneID:133065968"
ORIGIN      
        1 makwgegdpr wiveeradat nvnnwhwter dasnwstdkl ktlflavrvq neegkcevte
       61 vskldgeasi nnrkgkliff yewsiklnwt gtsksgvqyk ghveipnlsd ensvdeveis
      121 vslakdepdt nlvalmkeeg vkllreamgi yistlkteft qgmilptvng esvdpagppa
      181 lkteerkaks apsktqarpv gvkiptckit lresfltspe elyrvfttqe lvqafthapa
      241 mleadkggkf hlvdgnvsge ftdlvpekyi amkwrfkswp eghfatitlt fidkngetel
      301 cmegrgipap eeertrqgwq ryyfegikqt fgygarlf
//
LOCUS       XP_061012511             338 aa            linear   MAM 02-DEC-2023
DEFINITION  activator of 90 kDa heat shock protein ATPase homolog 1 isoform X1
            [Dama dama].
ACCESSION   XP_061012511
VERSION     XP_061012511.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156528.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..338
                     /product="activator of 90 kDa heat shock protein ATPase
                     homolog 1 isoform X1"
                     /calculated_mol_wt=38080
     Region          29..158
                     /region_name="Aha1_N"
                     /note="Activator of Hsp90 ATPase, N-terminal; smart01000"
                     /db_xref="CDD:214964"
     Region          208..333
                     /region_name="SRPBCC_Aha1"
                     /note="Putative hydrophobic ligand-binding SRPBCC domain
                     of the Hsp90 co-chaperone Aha1 and related proteins;
                     cd08892"
                     /db_xref="CDD:176901"
     Site            order(209,211,213,222..224,226..227,232,240,248,250,252,
                     254,256,258..259,261,264,270,272..273,286..287,289,291,
                     301,303,305,307,311..319,322..324,327)
                     /site_type="other"
                     /note="putative hydrophobic ligand binding site [chemical
                     binding]"
                     /db_xref="CDD:176901"
     Site            order(261,273,286,296..297)
                     /site_type="other"
                     /note="putative Hsp90 binding residues [polypeptide
                     binding]"
                     /db_xref="CDD:176901"
     CDS             1..338
                     /gene="AHSA1"
                     /coded_by="XM_061156528.1:112..1128"
                     /db_xref="GeneID:133065968"
ORIGIN      
        1 makwgegdpr wiveeradat nvnnwhwter dasnwstdkl ktlflavrvq neegkcevte
       61 vskldgeasi nnrkgkliff yewsiklnwt gtsksgvqyk ghveipnlsd ensvdeveis
      121 vslakdepdt nlvalmkeeg vkllreamgi yistlkteft qgmilptvng esvdpagppa
      181 lkteerkaks apsktqarpv gvkiptckit lresfltspe elyrvfttqe lvqafthapa
      241 mleadkggkf hlvdgnvsge ftdlvpekyi amkwrfkswp eghfatitlt fidkngetel
      301 cmegrgipap eeertrqgwq ryyfegikqt fgygarlf
//
LOCUS       XP_061012512             295 aa            linear   MAM 02-DEC-2023
DEFINITION  activator of 90 kDa heat shock protein ATPase homolog 1 isoform X2
            [Dama dama].
ACCESSION   XP_061012512
VERSION     XP_061012512.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156529.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..295
                     /product="activator of 90 kDa heat shock protein ATPase
                     homolog 1 isoform X2"
                     /calculated_mol_wt=33289
     Region          29..158
                     /region_name="Aha1_N"
                     /note="Activator of Hsp90 ATPase, N-terminal; smart01000"
                     /db_xref="CDD:214964"
     Region          180..290
                     /region_name="SRPBCC_Aha1"
                     /note="Putative hydrophobic ligand-binding SRPBCC domain
                     of the Hsp90 co-chaperone Aha1 and related proteins;
                     cd08892"
                     /db_xref="CDD:176901"
     Site            order(181..182,189,197,205,207,209,211,213,215..216,218,
                     221,227,229..230,243..244,246,248,258,260,262,264,
                     268..276,279..281,284)
                     /site_type="other"
                     /note="putative hydrophobic ligand binding site [chemical
                     binding]"
                     /db_xref="CDD:176901"
     Site            order(218,230,243,253..254)
                     /site_type="other"
                     /note="putative Hsp90 binding residues [polypeptide
                     binding]"
                     /db_xref="CDD:176901"
     CDS             1..295
                     /gene="AHSA1"
                     /coded_by="XM_061156529.1:149..1036"
                     /db_xref="GeneID:133065968"
ORIGIN      
        1 makwgegdpr wiveeradat nvnnwhwter dasnwstdkl ktlflavrvq neegkcevte
       61 vskldgeasi nnrkgkliff yewsiklnwt gtsksgvqyk ghveipnlsd ensvdeveis
      121 vslakdepdt nlvalmkeeg vkllreamgi yistlkteft qgmilptvng esvdpagppa
      181 lkteerklvq afthapamle adkggkfhlv dgnvsgeftd lvpekyiamk wrfkswpegh
      241 fatitltfid kngetelcme grgipapeee rtrqgwqryy fegikqtfgy garlf
//
LOCUS       XP_061012514             752 aa            linear   MAM 02-DEC-2023
DEFINITION  protein O-mannosyl-transferase 2 isoform X1 [Dama dama].
ACCESSION   XP_061012514
VERSION     XP_061012514.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156531.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..752
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..752
                     /product="protein O-mannosyl-transferase 2 isoform X1"
                     /calculated_mol_wt=84314
     Region          64..308
                     /region_name="PMT"
                     /note="Dolichyl-phosphate-mannose-protein
                     mannosyltransferase; pfam02366"
                     /db_xref="CDD:396786"
     Region          339..525
                     /region_name="beta-trefoil_MIR_POMT2"
                     /note="MIR domain, beta-trefoil fold, found in protein
                     O-mannosyl-transferase 2 (POMT2) and similar proteins;
                     cd23282"
                     /db_xref="CDD:467753"
     Site            order(437,488,490,509,515)
                     /site_type="other"
                     /note="putative heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:467753"
     Region          544..748
                     /region_name="PMT_4TMC"
                     /note="C-terminal four TMM region of
                     protein-O-mannosyltransferase; pfam16192"
                     /db_xref="CDD:465056"
     CDS             1..752
                     /gene="POMT2"
                     /coded_by="XM_061156531.1:148..2406"
                     /db_xref="GeneID:133065969"
ORIGIN      
        1 mppaagggla gselrprkgr cgsqaaraag rdvtteaata rspkrpapps srrfeaagrw
       61 allalvtlts fatrfhrldq pphicwdeth fgkmgsyyin rtfffdvhpp lgkmliglag
      121 ylsgydgtfl fqkpgdnyeh hsymgmrgfc aflgsmlvpl ayltvlelsr slpaalltaa
      181 fltfdtgclt lsqyilldpi lmffimaaml smvkynscan rpfsapwwfw lsltginlag
      241 algvkfvglf iilqvgwntl sdlwhlfgdl slsmvtlgkh ltarilcliv lplalyiaty
      301 avhfmvlnks gpgdgffssa fqarlsgnnl hnasipehla ygsvitvknl rmaigylhsh
      361 rhfypegvga rqqqvttylh kdynnlwiik khnsnsdpld pslpvefvrh gdiirlehke
      421 tsrnlhshyh eapltrkhyq vtgygingsg dsndfwriev inrkfgnrik vlrsrirlih
      481 lvtgcvlgss gkvlpkwgwe qlevtctpyl ketlssiwnv edhinpklpn islevlqpsf
      541 peimleshmv mirgnnglkp kdneftskpw hwpinfqglr fsgvndtdfr vyllgnpvvw
      601 wlnllslaly ilsasvfava vqrgarlpae veglsqvllr gggqlllgwm mhyfpfflmg
      661 rvlyfhhyfp amlfssmltg llwdtllrlc awslasypla gcvhtlgils lllgtaysfy
      721 lfhplaygmv gplaqdprsp maglrwlesw df
//
LOCUS       XP_061012515             753 aa            linear   MAM 02-DEC-2023
DEFINITION  protein O-mannosyl-transferase 2 isoform X2 [Dama dama].
ACCESSION   XP_061012515
VERSION     XP_061012515.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156532.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..753
                     /product="protein O-mannosyl-transferase 2 isoform X2"
                     /calculated_mol_wt=84386
     Region          64..308
                     /region_name="PMT"
                     /note="Dolichyl-phosphate-mannose-protein
                     mannosyltransferase; pfam02366"
                     /db_xref="CDD:396786"
     Region          339..526
                     /region_name="beta-trefoil_MIR_POMT2"
                     /note="MIR domain, beta-trefoil fold, found in protein
                     O-mannosyl-transferase 2 (POMT2) and similar proteins;
                     cd23282"
                     /db_xref="CDD:467753"
     Site            order(438,489,491,510,516)
                     /site_type="other"
                     /note="putative heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:467753"
     Region          545..749
                     /region_name="PMT_4TMC"
                     /note="C-terminal four TMM region of
                     protein-O-mannosyltransferase; pfam16192"
                     /db_xref="CDD:465056"
     CDS             1..753
                     /gene="POMT2"
                     /coded_by="XM_061156532.1:108..2369"
                     /db_xref="GeneID:133065969"
ORIGIN      
        1 mppaagggla gselrprkgr cgsqaaraag rdvtteaata rspkrpapps srrfeaagrw
       61 allalvtlts fatrfhrldq pphicwdeth fgkmgsyyin rtfffdvhpp lgkmliglag
      121 ylsgydgtfl fqkpgdnyeh hsymgmrgfc aflgsmlvpl ayltvlelsr slpaalltaa
      181 fltfdtgclt lsqyilldpi lmffimaaml smvkynscan rpfsapwwfw lsltginlag
      241 algvkfvglf iilqvgwntl sdlwhlfgdl slsmvtlgkh ltarilcliv lplalyiaty
      301 avhfmvlnks gpgdgffssa fqarlsgnnl hnasipehla ygsvitvknl rmaigylhsh
      361 rhfypegvga rqqqvttylh kdynnlwiik khnsnsadpl dpslpvefvr hgdiirlehk
      421 etsrnlhshy heapltrkhy qvtgygings gdsndfwrie vinrkfgnri kvlrsrirli
      481 hlvtgcvlgs sgkvlpkwgw eqlevtctpy lketlssiwn vedhinpklp nislevlqps
      541 fpeimleshm vmirgnnglk pkdneftskp whwpinfqgl rfsgvndtdf rvyllgnpvv
      601 wwlnllslal yilsasvfav avqrgarlpa eveglsqvll rgggqlllgw mmhyfpfflm
      661 grvlyfhhyf pamlfssmlt gllwdtllrl cawslasypl agcvhtlgil slllgtaysf
      721 ylfhplaygm vgplaqdprs pmaglrwles wdf
//
LOCUS       XP_061012516             659 aa            linear   MAM 02-DEC-2023
DEFINITION  sterile alpha motif domain-containing protein 15 [Dama dama].
ACCESSION   XP_061012516
VERSION     XP_061012516.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156533.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..659
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..659
                     /product="sterile alpha motif domain-containing protein
                     15"
                     /calculated_mol_wt=75787
     Region          17..>378
                     /region_name="PspC_subgroup_1"
                     /note="pneumococcal surface protein PspC, choline-binding
                     form; NF033838"
                     /db_xref="CDD:468201"
     Region          528..594
                     /region_name="SAM_Samd14"
                     /note="SAM domain of Samd14 subfamily; cd09530"
                     /db_xref="CDD:188929"
     CDS             1..659
                     /gene="SAMD15"
                     /coded_by="XM_061156533.1:125..2104"
                     /db_xref="GeneID:133065970"
ORIGIN      
        1 maevpedyds pseenenlkt erpklhflqv tediepgsva eagpeipvei dqdpqpetee
       61 eafkektpes akdvpphlkp twtseeevph kfrtdlfsev elgiplevks etfgqierel
      121 fkelqipvdr kheepeeeak pdipedvpie eskpevpeep lreqyektgl epteptkpep
      181 pgkkprksie eadqqppkvt tsenpeeiqs ksptekrtes peqakpefpe ekpsmateet
      241 qektpeplev iesefseeks rkpieetvte psgkttsevq eetqskstae rvleppedtk
      301 padqkdkqkk steetdltps rkfrseetlr kstekkgpep peqtkaefsk kepekteetg
      361 qvppqkikpe vqektqtept reinlelldk trqllrretp vefakedrse aikfkhsvdr
      421 deleysdypi gklliketkv skdyvleplp isevdsvnid yefskelqnl fqlsdtnyef
      481 fsffsesqrd lkessgekqd lslesmklvh knrdtqpekn sdlqfeylqw spekvakwic
      541 qlgfpqykec fttnfisgrk lihvncsnlp qmgitdfedm kvisqhtrkl lgieeplftr
      601 sirlpyrdni glflerkghs gvksdsltls efvreaglqd yaprvttlen daalysidl
//
LOCUS       XP_061012517             492 aa            linear   MAM 02-DEC-2023
DEFINITION  spermatogenesis-defective protein 39 homolog [Dama dama].
ACCESSION   XP_061012517
VERSION     XP_061012517.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156534.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..492
                     /product="spermatogenesis-defective protein 39 homolog"
                     /calculated_mol_wt=56804
     CDS             1..492
                     /gene="VIPAS39"
                     /coded_by="XM_061156534.1:128..1606"
                     /db_xref="GeneID:133065971"
ORIGIN      
        1 mnrtkgdeee ywnsskfkaf tfddeddels qlkeskravn slrdfvdddd eddlervswt
       61 gepvgsisws iketagnsgs shereqlknr nsfstyaqlp kpastyslss ffrgrtrpgs
      121 fqslsdalsd tpaksyapel grpkgeyrdy sndwspsdtv rrlrkgkvcs lerfrslqdk
      181 iqlleeavsm hdgnvitavl iflkrtlske ilfrelevrq valrhlihfl keigdqklll
      241 dlfrfldrte elalshyreh lniqdpekrk eflktcvglp fsaedsahiq dhytllerqi
      301 iieandrhle sagqtevfrk hprkasilnm plvttlfysc fyhyteaegt fsspvnlkkt
      361 fkipdkqyvl talaaraklr awhdvdalft tknwlgytkk rapigfhrvv eilhknnapv
      421 qilqeyvnlv edvdtklnla tkfkchdvvi dtcrdlkdrq qllayrskvd kgsaeeekid
      481 allnssqirw kn
//
LOCUS       XP_061012518             326 aa            linear   MAM 02-DEC-2023
DEFINITION  protein TMED8 isoform X1 [Dama dama].
ACCESSION   XP_061012518
VERSION     XP_061012518.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156535.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..326
                     /product="protein TMED8 isoform X1"
                     /calculated_mol_wt=35768
     Region          186..325
                     /region_name="GPCR_chapero_1"
                     /note="GPCR-chaperone; cl46312"
                     /db_xref="CDD:480652"
     CDS             1..326
                     /gene="TMED8"
                     /coded_by="XM_061156535.1:24..1004"
                     /db_xref="GeneID:133065973"
ORIGIN      
        1 msdpraaegp giwspaarrg pahglgdgpg vegsqaaase nedlentkvt slaasasdpe
       61 lhsspyrsqm vspvtedate dkrkaagaee aqasveqell sadqtqilsk makyhgpqrs
      121 gdivmiqseh tgavdilsad lesadllgdh rrvspplmap pciwtfakmk efksklgkek
      181 nsrlvvkrge vvtirvpthp egkrvcwefa tddydigfgv yfdwtpvtst ditvqvsdss
      241 edededeeed eeledpvpag dvergsrssl rgrygevmpv yrrdshrdvq agshdypgeg
      301 iyllkfdnsy sllrnktlyf hvyyts
//
LOCUS       XP_061012519             257 aa            linear   MAM 02-DEC-2023
DEFINITION  protein TMED8 isoform X2 [Dama dama].
ACCESSION   XP_061012519
VERSION     XP_061012519.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156536.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..257
                     /product="protein TMED8 isoform X2"
                     /calculated_mol_wt=28786
     Region          117..256
                     /region_name="GPCR_chapero_1"
                     /note="GPCR-chaperone; cl46312"
                     /db_xref="CDD:480652"
     CDS             1..257
                     /gene="TMED8"
                     /coded_by="XM_061156536.1:105..878"
                     /db_xref="GeneID:133065973"
ORIGIN      
        1 mvspvtedat edkrkaagae eaqasveqel lsadqtqils kmakyhgpqr sgdivmiqse
       61 htgavdilsa dlesadllgd hrrvspplma ppciwtfakm kefksklgke knsrlvvkrg
      121 evvtirvpth pegkrvcwef atddydigfg vyfdwtpvts tditvqvsds sedededeee
      181 deeledpvpa gdvergsrss lrgrygevmp vyrrdshrdv qagshdypge giyllkfdns
      241 ysllrnktly fhvyyts
//
LOCUS       XP_061012520             257 aa            linear   MAM 02-DEC-2023
DEFINITION  protein TMED8 isoform X2 [Dama dama].
ACCESSION   XP_061012520
VERSION     XP_061012520.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156537.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..257
                     /product="protein TMED8 isoform X2"
                     /calculated_mol_wt=28786
     Region          117..256
                     /region_name="GPCR_chapero_1"
                     /note="GPCR-chaperone; cl46312"
                     /db_xref="CDD:480652"
     CDS             1..257
                     /gene="TMED8"
                     /coded_by="XM_061156537.1:79..852"
                     /db_xref="GeneID:133065973"
ORIGIN      
        1 mvspvtedat edkrkaagae eaqasveqel lsadqtqils kmakyhgpqr sgdivmiqse
       61 htgavdilsa dlesadllgd hrrvspplma ppciwtfakm kefksklgke knsrlvvkrg
      121 evvtirvpth pegkrvcwef atddydigfg vyfdwtpvts tditvqvsds sedededeee
      181 deeledpvpa gdvergsrss lrgrygevmp vyrrdshrdv qagshdypge giyllkfdns
      241 ysllrnktly fhvyyts
//
LOCUS       XP_061012521             217 aa            linear   MAM 02-DEC-2023
DEFINITION  maleylacetoacetate isomerase isoform X1 [Dama dama].
ACCESSION   XP_061012521
VERSION     XP_061012521.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156538.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..217
                     /product="maleylacetoacetate isomerase isoform X1"
                     /calculated_mol_wt=23980
     Region          8..212
                     /region_name="maiA"
                     /note="maleylacetoacetate isomerase; TIGR01262"
                     /db_xref="CDD:273527"
     CDS             1..217
                     /gene="GSTZ1"
                     /coded_by="XM_061156538.1:603..1256"
                     /db_xref="GeneID:133065974"
ORIGIN      
        1 maesskpily syfrsscswr vrialalkni dyetvavnli kdggqqfsee fqalnpmkqv
       61 palkidgiti gqslaiieyl eetrptprll pqdpkkraqv rmvsdliasg iqplqnlsvl
      121 kqvgqenqlt waqqaitsgf naleqilqss agrycvgdev smadlclapq vanadrfkvd
      181 ltpyptisri nksllaleaf hvshpcrqpd tppelra
//
LOCUS       XP_061012522             217 aa            linear   MAM 02-DEC-2023
DEFINITION  maleylacetoacetate isomerase isoform X1 [Dama dama].
ACCESSION   XP_061012522
VERSION     XP_061012522.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156539.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..217
                     /product="maleylacetoacetate isomerase isoform X1"
                     /calculated_mol_wt=23980
     Region          8..212
                     /region_name="maiA"
                     /note="maleylacetoacetate isomerase; TIGR01262"
                     /db_xref="CDD:273527"
     CDS             1..217
                     /gene="GSTZ1"
                     /coded_by="XM_061156539.1:495..1148"
                     /db_xref="GeneID:133065974"
ORIGIN      
        1 maesskpily syfrsscswr vrialalkni dyetvavnli kdggqqfsee fqalnpmkqv
       61 palkidgiti gqslaiieyl eetrptprll pqdpkkraqv rmvsdliasg iqplqnlsvl
      121 kqvgqenqlt waqqaitsgf naleqilqss agrycvgdev smadlclapq vanadrfkvd
      181 ltpyptisri nksllaleaf hvshpcrqpd tppelra
//
LOCUS       XP_061012523             217 aa            linear   MAM 02-DEC-2023
DEFINITION  maleylacetoacetate isomerase isoform X1 [Dama dama].
ACCESSION   XP_061012523
VERSION     XP_061012523.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156540.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..217
                     /product="maleylacetoacetate isomerase isoform X1"
                     /calculated_mol_wt=23980
     Region          8..212
                     /region_name="maiA"
                     /note="maleylacetoacetate isomerase; TIGR01262"
                     /db_xref="CDD:273527"
     CDS             1..217
                     /gene="GSTZ1"
                     /coded_by="XM_061156540.1:705..1358"
                     /db_xref="GeneID:133065974"
ORIGIN      
        1 maesskpily syfrsscswr vrialalkni dyetvavnli kdggqqfsee fqalnpmkqv
       61 palkidgiti gqslaiieyl eetrptprll pqdpkkraqv rmvsdliasg iqplqnlsvl
      121 kqvgqenqlt waqqaitsgf naleqilqss agrycvgdev smadlclapq vanadrfkvd
      181 ltpyptisri nksllaleaf hvshpcrqpd tppelra
//
LOCUS       XP_061012524             216 aa            linear   MAM 02-DEC-2023
DEFINITION  maleylacetoacetate isomerase isoform X2 [Dama dama].
ACCESSION   XP_061012524
VERSION     XP_061012524.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156541.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..216
                     /product="maleylacetoacetate isomerase isoform X2"
                     /calculated_mol_wt=23890
     Region          7..211
                     /region_name="maiA"
                     /note="maleylacetoacetate isomerase; TIGR01262"
                     /db_xref="CDD:273527"
     CDS             1..216
                     /gene="GSTZ1"
                     /coded_by="XM_061156541.1:431..1081"
                     /db_xref="GeneID:133065974"
ORIGIN      
        1 mqvgkpilys yfrsscswrv rialalknid yetvavnlik dggqqfseef qalnpmkqvp
       61 alkidgitig qslaiieyle etrptprllp qdpkkraqvr mvsdliasgi qplqnlsvlk
      121 qvgqenqltw aqqaitsgfn aleqilqssa grycvgdevs madlclapqv anadrfkvdl
      181 tpyptisrin ksllaleafh vshpcrqpdt ppelra
//
LOCUS       XP_061012525             161 aa            linear   MAM 02-DEC-2023
DEFINITION  maleylacetoacetate isomerase isoform X3 [Dama dama].
ACCESSION   XP_061012525
VERSION     XP_061012525.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156542.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..161
                     /product="maleylacetoacetate isomerase isoform X3"
                     /calculated_mol_wt=17611
     Region          <1..156
                     /region_name="maiA"
                     /note="maleylacetoacetate isomerase; TIGR01262"
                     /db_xref="CDD:273527"
     CDS             1..161
                     /gene="GSTZ1"
                     /coded_by="XM_061156542.1:704..1189"
                     /db_xref="GeneID:133065974"
ORIGIN      
        1 mkqvpalkid gitigqslai ieyleetrpt prllpqdpkk raqvrmvsdl iasgiqplqn
       61 lsvlkqvgqe nqltwaqqai tsgfnaleqi lqssagrycv gdevsmadlc lapqvanadr
      121 fkvdltpypt isrinkslla leafhvshpc rqpdtppelr a
//
LOCUS       XP_061012526             366 aa            linear   MAM 02-DEC-2023
DEFINITION  NADP-dependent oxidoreductase domain-containing protein 1 [Dama
            dama].
ACCESSION   XP_061012526
VERSION     XP_061012526.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156543.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..366
                     /product="NADP-dependent oxidoreductase domain-containing
                     protein 1"
                     /calculated_mol_wt=41062
     Region          84..>195
                     /region_name="ProC"
                     /note="Pyrroline-5-carboxylate reductase [Amino acid
                     transport and metabolism]; COG0345"
                     /db_xref="CDD:440114"
     CDS             1..366
                     /gene="NOXRED1"
                     /coded_by="XM_061156543.1:2846..3946"
                     /db_xref="GeneID:133065975"
ORIGIN      
        1 mdlledletl kfesgiheed hnwlyllgrs hglmitacah atffckllhn lreslsrksv
       61 lekrtskcrl tglceetqdd dalkvgiigg ghlgkqlart llqlvpipae nlqistrrpe
      121 tldefkklgi qcfyqntslv gwanvvflcc lpsqlpnicv eiqarlgkdc ivysfvsaip
      181 vsrlklllnh tnilrpqyqc aedlahiwga nkeitaalqd pailqatcpy spaggislni
      241 kwlegifyal lnfcaakdmp hsqvlqhlse lfssqhleac kedeaaplkf qaqdfvskiy
      301 aknlsqkrpf plfdlttvql ketpfsqyls nsttfqdrfi hlyydsfgis ltkeqepevs
      361 tgspsq
//
LOCUS       XP_061012527             804 aa            linear   MAM 02-DEC-2023
DEFINITION  calcium permeable stress-gated cation channel 1 [Dama dama].
ACCESSION   XP_061012527
VERSION     XP_061012527.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156544.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..804
                     /product="calcium permeable stress-gated cation channel 1"
                     /calculated_mol_wt=93129
     Region          40..197
                     /region_name="RSN1_TM"
                     /note="Late exocytosis, associated with Golgi transport;
                     pfam13967"
                     /db_xref="CDD:433613"
     Region          220..398
                     /region_name="PHM7_cyt"
                     /note="Cytosolic domain of 10TM putative phosphate
                     transporter; pfam14703"
                     /db_xref="CDD:464272"
     Region          427..680
                     /region_name="RSN1_7TM"
                     /note="Calcium-dependent channel, 7TM region, putative
                     phosphate; pfam02714"
                     /db_xref="CDD:460661"
     CDS             1..804
                     /gene="TMEM63C"
                     /coded_by="XM_061156544.1:427..2841"
                     /db_xref="GeneID:133065977"
ORIGIN      
        1 mtvlpsnvnm vgksrnftvd dcfssrntvl kgqpfggipt vlflnitvwv vivlvysflr
       61 kaawdygrla llihndslts liygeqsekt spsdisleme hrdkgfyswf fntitmkned
      121 lisrcgddar iyimfqyhli ifllilcips lgiilpinys gdvldrdshf grttivnvst
      181 eskflwlhsf faflyfitnl lfmmhhclgf vprksyavtr tlmityvptd iqdpeiiikh
      241 fheaypgcvv trvhfcydvr nlidlddqrr hamrgrlyyt akakkkgkvm ikvhpcsrlc
      301 fcrcwacfke vdaeqyysel eeqltdefna elnrarlnrl dlifvtfqds rmtkhilqdy
      361 kfihcgmspk essvttivks yqwrvvraph pkeiiwkhls vrrfhwwarf iaintflfvl
      421 ffflttpaii intidlynvt rpienlqspi vtqffpsvll waftvtlpli vylsafleah
      481 wtrssqnlim vhkcyiflvf mvvilpsmgl tsldvffrwl fdiyyleqas vrfqcvflpd
      541 ngaffvnyvi taafigtgme lmrlgslfly tirlvfsrse pervhirmnq amdfqfgrey
      601 awmmnvfsvv iaysitcpii apfgllylcm khitdrynmy ysyaptklne qihmaaihqa
      661 ifapllglvw mlffsvlrlg srhaitifcl ttlvasiima cvatfmgrms kmsnyepeet
      721 etvfdlepss tsstptslly vatvlqepem nltpasspar ptygtmsrqp eegeeesgvr
      781 afsreldsaq fqeglelgdq sqyh
//
LOCUS       XP_061012528             804 aa            linear   MAM 02-DEC-2023
DEFINITION  calcium permeable stress-gated cation channel 1 [Dama dama].
ACCESSION   XP_061012528
VERSION     XP_061012528.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156545.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..804
                     /product="calcium permeable stress-gated cation channel 1"
                     /calculated_mol_wt=93129
     Region          40..197
                     /region_name="RSN1_TM"
                     /note="Late exocytosis, associated with Golgi transport;
                     pfam13967"
                     /db_xref="CDD:433613"
     Region          220..398
                     /region_name="PHM7_cyt"
                     /note="Cytosolic domain of 10TM putative phosphate
                     transporter; pfam14703"
                     /db_xref="CDD:464272"
     Region          427..680
                     /region_name="RSN1_7TM"
                     /note="Calcium-dependent channel, 7TM region, putative
                     phosphate; pfam02714"
                     /db_xref="CDD:460661"
     CDS             1..804
                     /gene="TMEM63C"
                     /coded_by="XM_061156545.1:424..2838"
                     /db_xref="GeneID:133065977"
ORIGIN      
        1 mtvlpsnvnm vgksrnftvd dcfssrntvl kgqpfggipt vlflnitvwv vivlvysflr
       61 kaawdygrla llihndslts liygeqsekt spsdisleme hrdkgfyswf fntitmkned
      121 lisrcgddar iyimfqyhli ifllilcips lgiilpinys gdvldrdshf grttivnvst
      181 eskflwlhsf faflyfitnl lfmmhhclgf vprksyavtr tlmityvptd iqdpeiiikh
      241 fheaypgcvv trvhfcydvr nlidlddqrr hamrgrlyyt akakkkgkvm ikvhpcsrlc
      301 fcrcwacfke vdaeqyysel eeqltdefna elnrarlnrl dlifvtfqds rmtkhilqdy
      361 kfihcgmspk essvttivks yqwrvvraph pkeiiwkhls vrrfhwwarf iaintflfvl
      421 ffflttpaii intidlynvt rpienlqspi vtqffpsvll waftvtlpli vylsafleah
      481 wtrssqnlim vhkcyiflvf mvvilpsmgl tsldvffrwl fdiyyleqas vrfqcvflpd
      541 ngaffvnyvi taafigtgme lmrlgslfly tirlvfsrse pervhirmnq amdfqfgrey
      601 awmmnvfsvv iaysitcpii apfgllylcm khitdrynmy ysyaptklne qihmaaihqa
      661 ifapllglvw mlffsvlrlg srhaitifcl ttlvasiima cvatfmgrms kmsnyepeet
      721 etvfdlepss tsstptslly vatvlqepem nltpasspar ptygtmsrqp eegeeesgvr
      781 afsreldsaq fqeglelgdq sqyh
//
LOCUS       XP_061012529             804 aa            linear   MAM 02-DEC-2023
DEFINITION  calcium permeable stress-gated cation channel 1 [Dama dama].
ACCESSION   XP_061012529
VERSION     XP_061012529.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156546.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..804
                     /product="calcium permeable stress-gated cation channel 1"
                     /calculated_mol_wt=93129
     Region          40..197
                     /region_name="RSN1_TM"
                     /note="Late exocytosis, associated with Golgi transport;
                     pfam13967"
                     /db_xref="CDD:433613"
     Region          220..398
                     /region_name="PHM7_cyt"
                     /note="Cytosolic domain of 10TM putative phosphate
                     transporter; pfam14703"
                     /db_xref="CDD:464272"
     Region          427..680
                     /region_name="RSN1_7TM"
                     /note="Calcium-dependent channel, 7TM region, putative
                     phosphate; pfam02714"
                     /db_xref="CDD:460661"
     CDS             1..804
                     /gene="TMEM63C"
                     /coded_by="XM_061156546.1:423..2837"
                     /db_xref="GeneID:133065977"
ORIGIN      
        1 mtvlpsnvnm vgksrnftvd dcfssrntvl kgqpfggipt vlflnitvwv vivlvysflr
       61 kaawdygrla llihndslts liygeqsekt spsdisleme hrdkgfyswf fntitmkned
      121 lisrcgddar iyimfqyhli ifllilcips lgiilpinys gdvldrdshf grttivnvst
      181 eskflwlhsf faflyfitnl lfmmhhclgf vprksyavtr tlmityvptd iqdpeiiikh
      241 fheaypgcvv trvhfcydvr nlidlddqrr hamrgrlyyt akakkkgkvm ikvhpcsrlc
      301 fcrcwacfke vdaeqyysel eeqltdefna elnrarlnrl dlifvtfqds rmtkhilqdy
      361 kfihcgmspk essvttivks yqwrvvraph pkeiiwkhls vrrfhwwarf iaintflfvl
      421 ffflttpaii intidlynvt rpienlqspi vtqffpsvll waftvtlpli vylsafleah
      481 wtrssqnlim vhkcyiflvf mvvilpsmgl tsldvffrwl fdiyyleqas vrfqcvflpd
      541 ngaffvnyvi taafigtgme lmrlgslfly tirlvfsrse pervhirmnq amdfqfgrey
      601 awmmnvfsvv iaysitcpii apfgllylcm khitdrynmy ysyaptklne qihmaaihqa
      661 ifapllglvw mlffsvlrlg srhaitifcl ttlvasiima cvatfmgrms kmsnyepeet
      721 etvfdlepss tsstptslly vatvlqepem nltpasspar ptygtmsrqp eegeeesgvr
      781 afsreldsaq fqeglelgdq sqyh
//
LOCUS       XP_061012530             804 aa            linear   MAM 02-DEC-2023
DEFINITION  calcium permeable stress-gated cation channel 1 [Dama dama].
ACCESSION   XP_061012530
VERSION     XP_061012530.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156547.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..804
                     /product="calcium permeable stress-gated cation channel 1"
                     /calculated_mol_wt=93129
     Region          40..197
                     /region_name="RSN1_TM"
                     /note="Late exocytosis, associated with Golgi transport;
                     pfam13967"
                     /db_xref="CDD:433613"
     Region          220..398
                     /region_name="PHM7_cyt"
                     /note="Cytosolic domain of 10TM putative phosphate
                     transporter; pfam14703"
                     /db_xref="CDD:464272"
     Region          427..680
                     /region_name="RSN1_7TM"
                     /note="Calcium-dependent channel, 7TM region, putative
                     phosphate; pfam02714"
                     /db_xref="CDD:460661"
     CDS             1..804
                     /gene="TMEM63C"
                     /coded_by="XM_061156547.1:374..2788"
                     /db_xref="GeneID:133065977"
ORIGIN      
        1 mtvlpsnvnm vgksrnftvd dcfssrntvl kgqpfggipt vlflnitvwv vivlvysflr
       61 kaawdygrla llihndslts liygeqsekt spsdisleme hrdkgfyswf fntitmkned
      121 lisrcgddar iyimfqyhli ifllilcips lgiilpinys gdvldrdshf grttivnvst
      181 eskflwlhsf faflyfitnl lfmmhhclgf vprksyavtr tlmityvptd iqdpeiiikh
      241 fheaypgcvv trvhfcydvr nlidlddqrr hamrgrlyyt akakkkgkvm ikvhpcsrlc
      301 fcrcwacfke vdaeqyysel eeqltdefna elnrarlnrl dlifvtfqds rmtkhilqdy
      361 kfihcgmspk essvttivks yqwrvvraph pkeiiwkhls vrrfhwwarf iaintflfvl
      421 ffflttpaii intidlynvt rpienlqspi vtqffpsvll waftvtlpli vylsafleah
      481 wtrssqnlim vhkcyiflvf mvvilpsmgl tsldvffrwl fdiyyleqas vrfqcvflpd
      541 ngaffvnyvi taafigtgme lmrlgslfly tirlvfsrse pervhirmnq amdfqfgrey
      601 awmmnvfsvv iaysitcpii apfgllylcm khitdrynmy ysyaptklne qihmaaihqa
      661 ifapllglvw mlffsvlrlg srhaitifcl ttlvasiima cvatfmgrms kmsnyepeet
      721 etvfdlepss tsstptslly vatvlqepem nltpasspar ptygtmsrqp eegeeesgvr
      781 afsreldsaq fqeglelgdq sqyh
//
LOCUS       XP_061012532             804 aa            linear   MAM 02-DEC-2023
DEFINITION  calcium permeable stress-gated cation channel 1 [Dama dama].
ACCESSION   XP_061012532
VERSION     XP_061012532.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156549.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..804
                     /product="calcium permeable stress-gated cation channel 1"
                     /calculated_mol_wt=93129
     Region          40..197
                     /region_name="RSN1_TM"
                     /note="Late exocytosis, associated with Golgi transport;
                     pfam13967"
                     /db_xref="CDD:433613"
     Region          220..398
                     /region_name="PHM7_cyt"
                     /note="Cytosolic domain of 10TM putative phosphate
                     transporter; pfam14703"
                     /db_xref="CDD:464272"
     Region          427..680
                     /region_name="RSN1_7TM"
                     /note="Calcium-dependent channel, 7TM region, putative
                     phosphate; pfam02714"
                     /db_xref="CDD:460661"
     CDS             1..804
                     /gene="TMEM63C"
                     /coded_by="XM_061156549.1:370..2784"
                     /db_xref="GeneID:133065977"
ORIGIN      
        1 mtvlpsnvnm vgksrnftvd dcfssrntvl kgqpfggipt vlflnitvwv vivlvysflr
       61 kaawdygrla llihndslts liygeqsekt spsdisleme hrdkgfyswf fntitmkned
      121 lisrcgddar iyimfqyhli ifllilcips lgiilpinys gdvldrdshf grttivnvst
      181 eskflwlhsf faflyfitnl lfmmhhclgf vprksyavtr tlmityvptd iqdpeiiikh
      241 fheaypgcvv trvhfcydvr nlidlddqrr hamrgrlyyt akakkkgkvm ikvhpcsrlc
      301 fcrcwacfke vdaeqyysel eeqltdefna elnrarlnrl dlifvtfqds rmtkhilqdy
      361 kfihcgmspk essvttivks yqwrvvraph pkeiiwkhls vrrfhwwarf iaintflfvl
      421 ffflttpaii intidlynvt rpienlqspi vtqffpsvll waftvtlpli vylsafleah
      481 wtrssqnlim vhkcyiflvf mvvilpsmgl tsldvffrwl fdiyyleqas vrfqcvflpd
      541 ngaffvnyvi taafigtgme lmrlgslfly tirlvfsrse pervhirmnq amdfqfgrey
      601 awmmnvfsvv iaysitcpii apfgllylcm khitdrynmy ysyaptklne qihmaaihqa
      661 ifapllglvw mlffsvlrlg srhaitifcl ttlvasiima cvatfmgrms kmsnyepeet
      721 etvfdlepss tsstptslly vatvlqepem nltpasspar ptygtmsrqp eegeeesgvr
      781 afsreldsaq fqeglelgdq sqyh
//
LOCUS       XP_061012533             804 aa            linear   MAM 02-DEC-2023
DEFINITION  calcium permeable stress-gated cation channel 1 [Dama dama].
ACCESSION   XP_061012533
VERSION     XP_061012533.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156550.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..804
                     /product="calcium permeable stress-gated cation channel 1"
                     /calculated_mol_wt=93129
     Region          40..197
                     /region_name="RSN1_TM"
                     /note="Late exocytosis, associated with Golgi transport;
                     pfam13967"
                     /db_xref="CDD:433613"
     Region          220..398
                     /region_name="PHM7_cyt"
                     /note="Cytosolic domain of 10TM putative phosphate
                     transporter; pfam14703"
                     /db_xref="CDD:464272"
     Region          427..680
                     /region_name="RSN1_7TM"
                     /note="Calcium-dependent channel, 7TM region, putative
                     phosphate; pfam02714"
                     /db_xref="CDD:460661"
     CDS             1..804
                     /gene="TMEM63C"
                     /coded_by="XM_061156550.1:243..2657"
                     /db_xref="GeneID:133065977"
ORIGIN      
        1 mtvlpsnvnm vgksrnftvd dcfssrntvl kgqpfggipt vlflnitvwv vivlvysflr
       61 kaawdygrla llihndslts liygeqsekt spsdisleme hrdkgfyswf fntitmkned
      121 lisrcgddar iyimfqyhli ifllilcips lgiilpinys gdvldrdshf grttivnvst
      181 eskflwlhsf faflyfitnl lfmmhhclgf vprksyavtr tlmityvptd iqdpeiiikh
      241 fheaypgcvv trvhfcydvr nlidlddqrr hamrgrlyyt akakkkgkvm ikvhpcsrlc
      301 fcrcwacfke vdaeqyysel eeqltdefna elnrarlnrl dlifvtfqds rmtkhilqdy
      361 kfihcgmspk essvttivks yqwrvvraph pkeiiwkhls vrrfhwwarf iaintflfvl
      421 ffflttpaii intidlynvt rpienlqspi vtqffpsvll waftvtlpli vylsafleah
      481 wtrssqnlim vhkcyiflvf mvvilpsmgl tsldvffrwl fdiyyleqas vrfqcvflpd
      541 ngaffvnyvi taafigtgme lmrlgslfly tirlvfsrse pervhirmnq amdfqfgrey
      601 awmmnvfsvv iaysitcpii apfgllylcm khitdrynmy ysyaptklne qihmaaihqa
      661 ifapllglvw mlffsvlrlg srhaitifcl ttlvasiima cvatfmgrms kmsnyepeet
      721 etvfdlepss tsstptslly vatvlqepem nltpasspar ptygtmsrqp eegeeesgvr
      781 afsreldsaq fqeglelgdq sqyh
//
LOCUS       XP_061012534             804 aa            linear   MAM 02-DEC-2023
DEFINITION  calcium permeable stress-gated cation channel 1 [Dama dama].
ACCESSION   XP_061012534
VERSION     XP_061012534.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156551.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..804
                     /product="calcium permeable stress-gated cation channel 1"
                     /calculated_mol_wt=93129
     Region          40..197
                     /region_name="RSN1_TM"
                     /note="Late exocytosis, associated with Golgi transport;
                     pfam13967"
                     /db_xref="CDD:433613"
     Region          220..398
                     /region_name="PHM7_cyt"
                     /note="Cytosolic domain of 10TM putative phosphate
                     transporter; pfam14703"
                     /db_xref="CDD:464272"
     Region          427..680
                     /region_name="RSN1_7TM"
                     /note="Calcium-dependent channel, 7TM region, putative
                     phosphate; pfam02714"
                     /db_xref="CDD:460661"
     CDS             1..804
                     /gene="TMEM63C"
                     /coded_by="XM_061156551.1:270..2684"
                     /db_xref="GeneID:133065977"
ORIGIN      
        1 mtvlpsnvnm vgksrnftvd dcfssrntvl kgqpfggipt vlflnitvwv vivlvysflr
       61 kaawdygrla llihndslts liygeqsekt spsdisleme hrdkgfyswf fntitmkned
      121 lisrcgddar iyimfqyhli ifllilcips lgiilpinys gdvldrdshf grttivnvst
      181 eskflwlhsf faflyfitnl lfmmhhclgf vprksyavtr tlmityvptd iqdpeiiikh
      241 fheaypgcvv trvhfcydvr nlidlddqrr hamrgrlyyt akakkkgkvm ikvhpcsrlc
      301 fcrcwacfke vdaeqyysel eeqltdefna elnrarlnrl dlifvtfqds rmtkhilqdy
      361 kfihcgmspk essvttivks yqwrvvraph pkeiiwkhls vrrfhwwarf iaintflfvl
      421 ffflttpaii intidlynvt rpienlqspi vtqffpsvll waftvtlpli vylsafleah
      481 wtrssqnlim vhkcyiflvf mvvilpsmgl tsldvffrwl fdiyyleqas vrfqcvflpd
      541 ngaffvnyvi taafigtgme lmrlgslfly tirlvfsrse pervhirmnq amdfqfgrey
      601 awmmnvfsvv iaysitcpii apfgllylcm khitdrynmy ysyaptklne qihmaaihqa
      661 ifapllglvw mlffsvlrlg srhaitifcl ttlvasiima cvatfmgrms kmsnyepeet
      721 etvfdlepss tsstptslly vatvlqepem nltpasspar ptygtmsrqp eegeeesgvr
      781 afsreldsaq fqeglelgdq sqyh
//
LOCUS       XP_061012535             399 aa            linear   MAM 02-DEC-2023
DEFINITION  CLOCK-interacting pacemaker [Dama dama].
ACCESSION   XP_061012535
VERSION     XP_061012535.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156552.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..399
                     /product="CLOCK-interacting pacemaker"
                     /calculated_mol_wt=42542
     Region          38..376
                     /region_name="CiPC"
                     /note="Clock interacting protein circadian; pfam15800"
                     /db_xref="CDD:464879"
     CDS             1..399
                     /gene="CIPC"
                     /coded_by="XM_061156552.1:251..1450"
                     /db_xref="GeneID:133065978"
ORIGIN      
        1 merknpsreg srrlsakpsk gsemkkasrq lglaaaesdk dsgfsdgsse clssaeqmes
       61 edmlsalgws redrprpssk pasgafptls pmvvmknvlv kqgssssqlq swtvqpsfev
      121 isaqpqllfl hppvpspvsp chagekksds rnylpilnsy tkiaphpgkr glsrspeerg
      181 eggmqkkvct erlgpglsar eptktgagpp rpptpappsa klaedsalqg vpslvaggsp
      241 qtlqpvsssh vakapsltfa spaspvcasd stlhgvesss plsppaasys salwaaehfc
      301 rspdsfpeqr qskhrrfqnt lvvlhksgll eitlktkeli rqnqatqvel dqlkeqtrlf
      361 ieatksrapq awarlqaslt sgsghtssdl eafseqpdi
//
LOCUS       XP_061012536             771 aa            linear   MAM 02-DEC-2023
DEFINITION  probable E3 ubiquitin-protein ligase IRF2BPL [Dama dama].
ACCESSION   XP_061012536
VERSION     XP_061012536.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156553.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..771
                     /product="probable E3 ubiquitin-protein ligase IRF2BPL"
                     /calculated_mol_wt=79963
     Region          10..61
                     /region_name="IRF-2BP1_2"
                     /note="Interferon regulatory factor 2-binding protein zinc
                     finger; pfam11261"
                     /db_xref="CDD:463250"
     Region          683..748
                     /region_name="vRING-HC_IRF2BPL"
                     /note="variant of RING finger, HC subclass, found in
                     interferon regulatory factor 2-binding protein-like
                     (IRF-2BPL); cd16717"
                     /db_xref="CDD:438377"
     CDS             1..771
                     /gene="IRF2BPL"
                     /coded_by="XM_061156553.1:790..3105"
                     /db_xref="GeneID:133065979"
ORIGIN      
        1 msaaqvsssr rqscylcdlp rmpwamiwdf sepvcrgcvn yegadriefv ietarqlkra
       61 hgcfqdgrsp gppppvgvkt valsakeaaa aaaaaaaqqq qqqqqqqqln hvdgsskpav
      121 laapsglery glsaaaaaav eqrsrfeypp ppvslgsssh aarlpnglgg pngfpkptpe
      181 egppelnrqs pnsssaaasv asrrgthggl vaglpnpggg ggpqltvppn llpqtllngp
      241 asapvlpppp phalgsrgpp tpappgapgg paclggapgv saasssaass tsssvaevgv
      301 gaggkrpgsv sstdqerelk ekqrnaeala elseslrnra eewankpkmv rdtlltlagc
      361 tpyevrfkkd hsllgrvfaf davskpgmdy elklfieypt gsgnvyssas gvakqmyqdc
      421 mkdfgrglss gfkyleyekk hgsgdwrllg dllpeavrff kegvpgadml pqpyldascp
      481 mlptalvsls rapsappgtg alppatpsgr gaaaslrkrk aspepqdsae galklgeeqq
      541 rqqwmanqse alkltmsagg faapghaagg ppppppplgp hsnrttppes apqngpspma
      601 almsvadtlg tahspkdgss vhsttasarr nssspvspas vpgqrrltsr ngdlslqvap
      661 pppsthpgmd qvhpqnipds pmansgplcc ticherledt hfvqcpsvps hkfcfpcsre
      721 sikaqgatge vycpsgekcp lvgsnvpwaf mqgeiatila gdvkvkkerd p
//
LOCUS       XP_061012537             668 aa            linear   MAM 02-DEC-2023
DEFINITION  protein angel homolog 1 isoform X1 [Dama dama].
ACCESSION   XP_061012537
VERSION     XP_061012537.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156554.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..668
                     /product="protein angel homolog 1 isoform X1"
                     /calculated_mol_wt=74636
     Region          246..>447
                     /region_name="EEP"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; cl00490"
                     /db_xref="CDD:469791"
     CDS             1..668
                     /gene="ANGEL1"
                     /coded_by="XM_061156554.1:66..2072"
                     /db_xref="GeneID:133065981"
ORIGIN      
        1 miasclcyll lpaarlfral sdafftcrkn allakssssq vegdfamapr gpdqeecegl
       61 lqqwreegss qlfstvsdgp ivdkglaess lallmdnpge qdaaledkws srqlsdlwea
      121 enleepfpev lgeeaplsev qgpmwaavpv qtgpqytdca vlpmgalate qwdedpavva
      181 wsiapepvsq eeapvwpfag lgqlqpppve ipyheilwre wedfstqpda qgleagdgpq
      241 fqftlmsyni laqdlmqqss elylhchpdi lnwsyrfanl mqefqhwdpd ilclqevqed
      301 hyweqlepsl rmmgftcfyk rrtgcktdgc avcykptrfr llcaspveyf rpglellnrd
      361 nvglvlllqp lvpeglgqvs vaplcvanth vlynprrgdv klaqmailla evdkvarlsd
      421 gshcpvvlcg dlnsvpdspl ynfirdgelq yhgmpawkvs gqedfshqly qrklqaplwp
      481 sslgitdccq yvtschptss errqysrdfl lrfrfcsiac qrpvglvlme gvtdtkperp
      541 agwaesviee dtsesepdvp rtvgtiqhcl hltsvythfl pqhgrpevtt mplglgttvd
      601 yiffsaesce ngnrtdrrly rdgtlkllgr lsllseeilw aanglpnpfc ssdhlcllas
      661 fgmevaap
//
LOCUS       XP_061012538             631 aa            linear   MAM 02-DEC-2023
DEFINITION  protein angel homolog 1 isoform X2 [Dama dama].
ACCESSION   XP_061012538
VERSION     XP_061012538.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156555.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..631
                     /product="protein angel homolog 1 isoform X2"
                     /calculated_mol_wt=70478
     Region          246..>447
                     /region_name="EEP"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; cl00490"
                     /db_xref="CDD:469791"
     CDS             1..631
                     /gene="ANGEL1"
                     /coded_by="XM_061156555.1:66..1961"
                     /db_xref="GeneID:133065981"
ORIGIN      
        1 miasclcyll lpaarlfral sdafftcrkn allakssssq vegdfamapr gpdqeecegl
       61 lqqwreegss qlfstvsdgp ivdkglaess lallmdnpge qdaaledkws srqlsdlwea
      121 enleepfpev lgeeaplsev qgpmwaavpv qtgpqytdca vlpmgalate qwdedpavva
      181 wsiapepvsq eeapvwpfag lgqlqpppve ipyheilwre wedfstqpda qgleagdgpq
      241 fqftlmsyni laqdlmqqss elylhchpdi lnwsyrfanl mqefqhwdpd ilclqevqed
      301 hyweqlepsl rmmgftcfyk rrtgcktdgc avcykptrfr llcaspveyf rpglellnrd
      361 nvglvlllqp lvpeglgqvs vaplcvanth vlynprrgdv klaqmailla evdkvarlsd
      421 gshcpvvlcg dlnsvpdspl ynfirdgelq yhgmpawkvs gqedfshqly qrklqaplwp
      481 sslgitdccq yvtschptss errqysrdfl lrfrfcsiac qrpvglvlme gvtdtkperp
      541 agwaesviee dtsesepdvp rtvgtiqhcl hltsvythfl pqhgrpevtt mplglgttvd
      601 yiffsaesce ngnrtdhlcl lasfgmevaa p
//
LOCUS       XP_061012539             363 aa            linear   MAM 02-DEC-2023
DEFINITION  tubulinyl-Tyr carboxypeptidase 1 [Dama dama].
ACCESSION   XP_061012539
VERSION     XP_061012539.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156556.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..363
                     /product="tubulinyl-Tyr carboxypeptidase 1"
                     /calculated_mol_wt=40674
     Region          56..300
                     /region_name="Vasohibin"
                     /note="pfam14822"
                     /db_xref="CDD:434242"
     CDS             1..363
                     /gene="VASH1"
                     /coded_by="XM_061156556.1:814..1905"
                     /db_xref="GeneID:133065983"
ORIGIN      
        1 mpggkkvvgg gstgaaptaa avpsgvrrle tsegasaqrd depeeegeed lrdggipffv
       61 nrgglpvdep twermwkhva kihpdgekva qrirgatdlp kipipsvptf qpstpvperl
      121 eavqryirel qynhtgtqff eikksrpltg lmdlakemtk ealpikclea vilgiyltns
      181 mptlerfpis fktyfsgnyf rhivlgvnfg grygalgmsr redlmykppa frtlselvld
      241 yeaaygrcwh vlkkvklgqc vshdphsveq iewkhsvldv eklgredfrk elerhardmr
      301 lkigkgtgpp sptkdrkkdv sspqrgqssp hrrnsrserr psgekkpsep kampdlngyq
      361 irv
//
LOCUS       XP_061012540             482 aa            linear   MAM 02-DEC-2023
DEFINITION  G patch domain-containing protein 2-like isoform X1 [Dama dama].
ACCESSION   XP_061012540
VERSION     XP_061012540.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156557.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..482
                     /product="G patch domain-containing protein 2-like isoform
                     X1"
                     /calculated_mol_wt=53932
     CDS             1..482
                     /gene="GPATCH2L"
                     /coded_by="XM_061156557.1:97..1545"
                     /db_xref="GeneID:133065986"
ORIGIN      
        1 mdelvhdlas aleqtseqnk lgelweemal sprqqrrqlr krrgrkrrsd fthlaehtcc
       61 yseasessld ealkdcrema pvtnfsdsdd tmvakrhpal naivkskqhs whesdsften
      121 apcrplrrrr kvkrvtseva aslqqklkvs dwsyergcrf ksakkqrlsr wkentpwtss
      181 ghglcesaen rtflsktgrk ermeceadeq kqgsdenmse cetssvcsss dtglftndeg
      241 rqgddeqsdw fyegecvpgf tvpnllpnwa pdhcseverm dsgldklsds tfllpsrpaq
      301 rgyharfnrl pgaaarclrk grrrlvgkes sisnlgteri ghligdprqk eknkalasdf
      361 phisacahef nplsplysld vladashrrc spahcsarqa nihlgppcsr dikrkrkpva
      421 taslsspnav hmdavesatp asqapkppds ewlvrtsaae katdsaaatf fkmpqekspg
      481 ys
//
LOCUS       XP_061012541             482 aa            linear   MAM 02-DEC-2023
DEFINITION  G patch domain-containing protein 2-like isoform X1 [Dama dama].
ACCESSION   XP_061012541
VERSION     XP_061012541.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156558.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..482
                     /product="G patch domain-containing protein 2-like isoform
                     X1"
                     /calculated_mol_wt=53932
     CDS             1..482
                     /gene="GPATCH2L"
                     /coded_by="XM_061156558.1:69..1517"
                     /db_xref="GeneID:133065986"
ORIGIN      
        1 mdelvhdlas aleqtseqnk lgelweemal sprqqrrqlr krrgrkrrsd fthlaehtcc
       61 yseasessld ealkdcrema pvtnfsdsdd tmvakrhpal naivkskqhs whesdsften
      121 apcrplrrrr kvkrvtseva aslqqklkvs dwsyergcrf ksakkqrlsr wkentpwtss
      181 ghglcesaen rtflsktgrk ermeceadeq kqgsdenmse cetssvcsss dtglftndeg
      241 rqgddeqsdw fyegecvpgf tvpnllpnwa pdhcseverm dsgldklsds tfllpsrpaq
      301 rgyharfnrl pgaaarclrk grrrlvgkes sisnlgteri ghligdprqk eknkalasdf
      361 phisacahef nplsplysld vladashrrc spahcsarqa nihlgppcsr dikrkrkpva
      421 taslsspnav hmdavesatp asqapkppds ewlvrtsaae katdsaaatf fkmpqekspg
      481 ys
//
LOCUS       XP_061012542             477 aa            linear   MAM 02-DEC-2023
DEFINITION  G patch domain-containing protein 2-like isoform X2 [Dama dama].
ACCESSION   XP_061012542
VERSION     XP_061012542.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156559.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..477
                     /product="G patch domain-containing protein 2-like isoform
                     X2"
                     /calculated_mol_wt=53568
     CDS             1..477
                     /gene="GPATCH2L"
                     /coded_by="XM_061156559.1:97..1530"
                     /db_xref="GeneID:133065986"
ORIGIN      
        1 mdelvhdlas aleqtseqnk lgelweemal sprqqrrqlr krrgrkrrsd fthlaehtcc
       61 yseasessld ealkdcrema pvtnfsdsdd tmvakrhpal naivkskqhs whesdsften
      121 apcrplrrrr kvkrvtseva aslqqklkvs dwsyergcrf ksakkqrlsr wkentpwtss
      181 ghglcesaen rtflsktgrk ermeceadeq kqgsdenmse cetssvcsss dtglftndeg
      241 rqgddeqsdw fyegecvpgf tvpnllpnwa pdhcseverm dsgldklsds tfllpsrpaq
      301 rgyharfnrl pgaaarclrk grrrlvgkes sisnlgteri ghligdprqk dfwlpsagkr
      361 ernqfnplsp lysldvlada shrrcspahc sarqanihlg ppcsrdikrk rkpvatasls
      421 spnavhmdav esatpasqap kppdsewlvr tsaaekatds aaatffkmpq ekspgys
//
LOCUS       XP_061012543             452 aa            linear   MAM 02-DEC-2023
DEFINITION  transforming growth factor beta-3 proprotein [Dama dama].
ACCESSION   XP_061012543
VERSION     XP_061012543.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156560.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..452
                     /product="transforming growth factor beta-3 proprotein"
                     /calculated_mol_wt=51285
     Region          66..273
                     /region_name="TGFb_propeptide"
                     /note="TGF-beta propeptide; pfam00688"
                     /db_xref="CDD:459906"
     Region          352..452
                     /region_name="TGF_beta_TGFB3"
                     /note="transforming growth factor beta (TGF-beta) like
                     domain found in transforming growth factor beta-3
                     (TGF-beta-3) and similar proteins; cd19386"
                     /db_xref="CDD:381656"
     Site            order(360..362,364,366..368,370,379,381..385,396..398,
                     400..402,404..405,408..409,413..415,417..420,423,441..446,
                     452)
                     /site_type="other"
                     /note="putative homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381656"
     Site            order(365,371..372,374,430..434)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:381656"
     CDS             1..452
                     /gene="TGFB3"
                     /coded_by="XM_061156560.1:478..1836"
                     /db_xref="GeneID:133065987"
ORIGIN      
        1 mhllakpqss gsreaawfas lllhdcrgll lpglaaflpg prlkmhlqra lvvlallnfa
       61 tvslsmstct tldfnhikrk rveairgqil sklrltsppd psglasipiq vldlynstre
      121 lleevhgerg dvctqantes eyyakeiykf dmiqgleehn dltvcpkgit skifrfnvss
      181 veknetnlfr aefrvfrmpn paskrseqri elfqilqpge hiakqryidg knlptrgtge
      241 wlsfdvtdtv rewllrresn lgleisihcp chtfqpngdi leniqelmei kfkgvdsddd
      301 pgrgdlgrlk kkkehiphli lmmippnrld spghsqrkkr aldtnycfrn leenccvrpl
      361 yidfrqdlgw kwvhepkgyy anfcsgpcpy lrssdtthst vlglyntlnp easaspccvp
      421 qdlepltily yvgrtpkveq lsnmvvksck cs
//
LOCUS       XP_061012544             207 aa            linear   MAM 02-DEC-2023
DEFINITION  intraflagellar transport protein 43 homolog [Dama dama].
ACCESSION   XP_061012544
VERSION     XP_061012544.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156561.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..207
                     /product="intraflagellar transport protein 43 homolog"
                     /calculated_mol_wt=23264
     Region          62..191
                     /region_name="IFT43"
                     /note="Intraflagellar transport protein 43; pfam15305"
                     /db_xref="CDD:464631"
     CDS             1..207
                     /gene="IFT43"
                     /coded_by="XM_061156561.1:23..646"
                     /db_xref="GeneID:133065988"
ORIGIN      
        1 medlldldee rrrgpatsga kmgrraqqes tqaenhlsgk nssstltaev pppkpprqqg
       61 gwtddfmkvs ksrrraskei edrrlrqqsl drsddggdip vipdleevqe edfvlqvaap
      121 psiqvnrvmt yrdldsdlmk ysafqtldge idlklltkvl apehevredd vswdwdhlyt
      181 evssellsew dalptdkegp vgppaht
//
LOCUS       XP_061012545            1345 aa            linear   MAM 02-DEC-2023
DEFINITION  tubulin polyglutamylase TTLL5 isoform X1 [Dama dama].
ACCESSION   XP_061012545
VERSION     XP_061012545.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156562.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1345
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1345
                     /product="tubulin polyglutamylase TTLL5 isoform X1"
                     /calculated_mol_wt=149813
     Region          117..395
                     /region_name="TTL"
                     /note="Tubulin-tyrosine ligase family; pfam03133"
                     /db_xref="CDD:397308"
     Region          <940..1331
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1345
                     /gene="TTLL5"
                     /coded_by="XM_061156562.1:234..4271"
                     /db_xref="GeneID:133065989"
ORIGIN      
        1 mpvvmardle etasssedee vvsqedhpci mwtggcrrip vlvfhaeail tkdnnirvig
       61 eryhlsykiv rtdsrlvrsi ltahgfhevh psstdynlmw tgshlkpfll rtlseaqkvn
      121 hfprsyeltr kdrlykniir mqhthgfkaf hilpqtfllp aeyaefcnsy skdrgpwivk
      181 pvassrgrgv ylinnpnqis leenilvsry innplliddf kfdvrlyvlv tsydplviyl
      241 yeeglarfat vrydqgakni rnqfmhltny svnkksgdyv scddpevedy gnkwsmsaml
      301 rylkqegrdt talmahvedl iiktiisael aiatacktfv phrsscfely gfdvlidstl
      361 kpwllevnls pslacdapld lkikasmisd mftvvgfvcq dpaqrtstrp iyptfessrr
      421 npfqkpqrpv saqfqsstvk qrsrplsasd aemknlvgsa rekvpgklgg svlglsmeei
      481 kvlrrvkeen drrggfirif ptsetweiyg sylehktsmn ymlatrlfqd rgnprrsllt
      541 grtrmvvdgt pelkvesmns raklhaalye rkllslevrk rrrrsgrlra mrpkypvitq
      601 paemnvktet eseeeeeval dnedeeqeay qeesagslge nqakytpslt vmienspken
      661 smkvpewnnk geqcckietq epepkfnlmq ilqdngnlsk vqariafsay lqhvqirlmk
      721 dsggqtfsas waakedeqme lvvrflkras snlqhslrmv lpsrrlalle rrrilahqlg
      781 dfisvynket eqmaekkskk kleeeeedgv nsenfqefir qaseaeleev ltfytqknks
      841 asvflgthsk ssknsnsfsd sgakgdhpet ieevkikqpk qqqtseihsd klsrfttsae
      901 keakliytns stsfsgpaap llqkipnthl ssvvtssdls pgsglhsisq vhpaipsmph
      961 qpavllstvp dsaslsihpg tqnvpspagl prcrsgsyti gpfssfqsaa hiysqklsrp
     1021 ssakaagsch pnkqhsgvar aqkegedgsp ysrrynpsmv taelqrlaek qaarqyspst
     1081 hislltqqvt nlnlassiin rssastpptl rpvispsgpt wsiqsdpqap esrstppgsr
     1141 slqtggfawe gevennaysk atgvvpqhky hptagsyqlh falqqleqqk lqsrqlldqs
     1201 rarhqaifgs qtlpnsslwt inngaacrip satasgqkpt tlpqkvvppa ssssslvpkp
     1261 ppnhkqvlrk atsqraskga saegqlnglq gslnsaafvp itsstgslea pqvifarskp
     1321 lptqsgalat vighrkpksv ksgpi
//
LOCUS       XP_061012546            1345 aa            linear   MAM 02-DEC-2023
DEFINITION  tubulin polyglutamylase TTLL5 isoform X1 [Dama dama].
ACCESSION   XP_061012546
VERSION     XP_061012546.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156563.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1345
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1345
                     /product="tubulin polyglutamylase TTLL5 isoform X1"
                     /calculated_mol_wt=149813
     Region          117..395
                     /region_name="TTL"
                     /note="Tubulin-tyrosine ligase family; pfam03133"
                     /db_xref="CDD:397308"
     Region          <940..1331
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1345
                     /gene="TTLL5"
                     /coded_by="XM_061156563.1:252..4289"
                     /db_xref="GeneID:133065989"
ORIGIN      
        1 mpvvmardle etasssedee vvsqedhpci mwtggcrrip vlvfhaeail tkdnnirvig
       61 eryhlsykiv rtdsrlvrsi ltahgfhevh psstdynlmw tgshlkpfll rtlseaqkvn
      121 hfprsyeltr kdrlykniir mqhthgfkaf hilpqtfllp aeyaefcnsy skdrgpwivk
      181 pvassrgrgv ylinnpnqis leenilvsry innplliddf kfdvrlyvlv tsydplviyl
      241 yeeglarfat vrydqgakni rnqfmhltny svnkksgdyv scddpevedy gnkwsmsaml
      301 rylkqegrdt talmahvedl iiktiisael aiatacktfv phrsscfely gfdvlidstl
      361 kpwllevnls pslacdapld lkikasmisd mftvvgfvcq dpaqrtstrp iyptfessrr
      421 npfqkpqrpv saqfqsstvk qrsrplsasd aemknlvgsa rekvpgklgg svlglsmeei
      481 kvlrrvkeen drrggfirif ptsetweiyg sylehktsmn ymlatrlfqd rgnprrsllt
      541 grtrmvvdgt pelkvesmns raklhaalye rkllslevrk rrrrsgrlra mrpkypvitq
      601 paemnvktet eseeeeeval dnedeeqeay qeesagslge nqakytpslt vmienspken
      661 smkvpewnnk geqcckietq epepkfnlmq ilqdngnlsk vqariafsay lqhvqirlmk
      721 dsggqtfsas waakedeqme lvvrflkras snlqhslrmv lpsrrlalle rrrilahqlg
      781 dfisvynket eqmaekkskk kleeeeedgv nsenfqefir qaseaeleev ltfytqknks
      841 asvflgthsk ssknsnsfsd sgakgdhpet ieevkikqpk qqqtseihsd klsrfttsae
      901 keakliytns stsfsgpaap llqkipnthl ssvvtssdls pgsglhsisq vhpaipsmph
      961 qpavllstvp dsaslsihpg tqnvpspagl prcrsgsyti gpfssfqsaa hiysqklsrp
     1021 ssakaagsch pnkqhsgvar aqkegedgsp ysrrynpsmv taelqrlaek qaarqyspst
     1081 hislltqqvt nlnlassiin rssastpptl rpvispsgpt wsiqsdpqap esrstppgsr
     1141 slqtggfawe gevennaysk atgvvpqhky hptagsyqlh falqqleqqk lqsrqlldqs
     1201 rarhqaifgs qtlpnsslwt inngaacrip satasgqkpt tlpqkvvppa ssssslvpkp
     1261 ppnhkqvlrk atsqraskga saegqlnglq gslnsaafvp itsstgslea pqvifarskp
     1321 lptqsgalat vighrkpksv ksgpi
//
LOCUS       XP_061012547            1345 aa            linear   MAM 02-DEC-2023
DEFINITION  tubulin polyglutamylase TTLL5 isoform X1 [Dama dama].
ACCESSION   XP_061012547
VERSION     XP_061012547.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156564.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1345
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1345
                     /product="tubulin polyglutamylase TTLL5 isoform X1"
                     /calculated_mol_wt=149813
     Region          117..395
                     /region_name="TTL"
                     /note="Tubulin-tyrosine ligase family; pfam03133"
                     /db_xref="CDD:397308"
     Region          <940..1331
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1345
                     /gene="TTLL5"
                     /coded_by="XM_061156564.1:199..4236"
                     /db_xref="GeneID:133065989"
ORIGIN      
        1 mpvvmardle etasssedee vvsqedhpci mwtggcrrip vlvfhaeail tkdnnirvig
       61 eryhlsykiv rtdsrlvrsi ltahgfhevh psstdynlmw tgshlkpfll rtlseaqkvn
      121 hfprsyeltr kdrlykniir mqhthgfkaf hilpqtfllp aeyaefcnsy skdrgpwivk
      181 pvassrgrgv ylinnpnqis leenilvsry innplliddf kfdvrlyvlv tsydplviyl
      241 yeeglarfat vrydqgakni rnqfmhltny svnkksgdyv scddpevedy gnkwsmsaml
      301 rylkqegrdt talmahvedl iiktiisael aiatacktfv phrsscfely gfdvlidstl
      361 kpwllevnls pslacdapld lkikasmisd mftvvgfvcq dpaqrtstrp iyptfessrr
      421 npfqkpqrpv saqfqsstvk qrsrplsasd aemknlvgsa rekvpgklgg svlglsmeei
      481 kvlrrvkeen drrggfirif ptsetweiyg sylehktsmn ymlatrlfqd rgnprrsllt
      541 grtrmvvdgt pelkvesmns raklhaalye rkllslevrk rrrrsgrlra mrpkypvitq
      601 paemnvktet eseeeeeval dnedeeqeay qeesagslge nqakytpslt vmienspken
      661 smkvpewnnk geqcckietq epepkfnlmq ilqdngnlsk vqariafsay lqhvqirlmk
      721 dsggqtfsas waakedeqme lvvrflkras snlqhslrmv lpsrrlalle rrrilahqlg
      781 dfisvynket eqmaekkskk kleeeeedgv nsenfqefir qaseaeleev ltfytqknks
      841 asvflgthsk ssknsnsfsd sgakgdhpet ieevkikqpk qqqtseihsd klsrfttsae
      901 keakliytns stsfsgpaap llqkipnthl ssvvtssdls pgsglhsisq vhpaipsmph
      961 qpavllstvp dsaslsihpg tqnvpspagl prcrsgsyti gpfssfqsaa hiysqklsrp
     1021 ssakaagsch pnkqhsgvar aqkegedgsp ysrrynpsmv taelqrlaek qaarqyspst
     1081 hislltqqvt nlnlassiin rssastpptl rpvispsgpt wsiqsdpqap esrstppgsr
     1141 slqtggfawe gevennaysk atgvvpqhky hptagsyqlh falqqleqqk lqsrqlldqs
     1201 rarhqaifgs qtlpnsslwt inngaacrip satasgqkpt tlpqkvvppa ssssslvpkp
     1261 ppnhkqvlrk atsqraskga saegqlnglq gslnsaafvp itsstgslea pqvifarskp
     1321 lptqsgalat vighrkpksv ksgpi
//
LOCUS       XP_061012548            1345 aa            linear   MAM 02-DEC-2023
DEFINITION  tubulin polyglutamylase TTLL5 isoform X1 [Dama dama].
ACCESSION   XP_061012548
VERSION     XP_061012548.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156565.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1345
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1345
                     /product="tubulin polyglutamylase TTLL5 isoform X1"
                     /calculated_mol_wt=149813
     Region          117..395
                     /region_name="TTL"
                     /note="Tubulin-tyrosine ligase family; pfam03133"
                     /db_xref="CDD:397308"
     Region          <940..1331
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1345
                     /gene="TTLL5"
                     /coded_by="XM_061156565.1:234..4271"
                     /db_xref="GeneID:133065989"
ORIGIN      
        1 mpvvmardle etasssedee vvsqedhpci mwtggcrrip vlvfhaeail tkdnnirvig
       61 eryhlsykiv rtdsrlvrsi ltahgfhevh psstdynlmw tgshlkpfll rtlseaqkvn
      121 hfprsyeltr kdrlykniir mqhthgfkaf hilpqtfllp aeyaefcnsy skdrgpwivk
      181 pvassrgrgv ylinnpnqis leenilvsry innplliddf kfdvrlyvlv tsydplviyl
      241 yeeglarfat vrydqgakni rnqfmhltny svnkksgdyv scddpevedy gnkwsmsaml
      301 rylkqegrdt talmahvedl iiktiisael aiatacktfv phrsscfely gfdvlidstl
      361 kpwllevnls pslacdapld lkikasmisd mftvvgfvcq dpaqrtstrp iyptfessrr
      421 npfqkpqrpv saqfqsstvk qrsrplsasd aemknlvgsa rekvpgklgg svlglsmeei
      481 kvlrrvkeen drrggfirif ptsetweiyg sylehktsmn ymlatrlfqd rgnprrsllt
      541 grtrmvvdgt pelkvesmns raklhaalye rkllslevrk rrrrsgrlra mrpkypvitq
      601 paemnvktet eseeeeeval dnedeeqeay qeesagslge nqakytpslt vmienspken
      661 smkvpewnnk geqcckietq epepkfnlmq ilqdngnlsk vqariafsay lqhvqirlmk
      721 dsggqtfsas waakedeqme lvvrflkras snlqhslrmv lpsrrlalle rrrilahqlg
      781 dfisvynket eqmaekkskk kleeeeedgv nsenfqefir qaseaeleev ltfytqknks
      841 asvflgthsk ssknsnsfsd sgakgdhpet ieevkikqpk qqqtseihsd klsrfttsae
      901 keakliytns stsfsgpaap llqkipnthl ssvvtssdls pgsglhsisq vhpaipsmph
      961 qpavllstvp dsaslsihpg tqnvpspagl prcrsgsyti gpfssfqsaa hiysqklsrp
     1021 ssakaagsch pnkqhsgvar aqkegedgsp ysrrynpsmv taelqrlaek qaarqyspst
     1081 hislltqqvt nlnlassiin rssastpptl rpvispsgpt wsiqsdpqap esrstppgsr
     1141 slqtggfawe gevennaysk atgvvpqhky hptagsyqlh falqqleqqk lqsrqlldqs
     1201 rarhqaifgs qtlpnsslwt inngaacrip satasgqkpt tlpqkvvppa ssssslvpkp
     1261 ppnhkqvlrk atsqraskga saegqlnglq gslnsaafvp itsstgslea pqvifarskp
     1321 lptqsgalat vighrkpksv ksgpi
//
LOCUS       XP_061012549            1344 aa            linear   MAM 02-DEC-2023
DEFINITION  tubulin polyglutamylase TTLL5 isoform X2 [Dama dama].
ACCESSION   XP_061012549
VERSION     XP_061012549.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156566.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1344
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1344
                     /product="tubulin polyglutamylase TTLL5 isoform X2"
                     /calculated_mol_wt=149742
     Region          117..395
                     /region_name="TTL"
                     /note="Tubulin-tyrosine ligase family; pfam03133"
                     /db_xref="CDD:397308"
     CDS             1..1344
                     /gene="TTLL5"
                     /coded_by="XM_061156566.1:234..4268"
                     /db_xref="GeneID:133065989"
ORIGIN      
        1 mpvvmardle etasssedee vvsqedhpci mwtggcrrip vlvfhaeail tkdnnirvig
       61 eryhlsykiv rtdsrlvrsi ltahgfhevh psstdynlmw tgshlkpfll rtlseaqkvn
      121 hfprsyeltr kdrlykniir mqhthgfkaf hilpqtfllp aeyaefcnsy skdrgpwivk
      181 pvassrgrgv ylinnpnqis leenilvsry innplliddf kfdvrlyvlv tsydplviyl
      241 yeeglarfat vrydqgakni rnqfmhltny svnkksgdyv scddpevedy gnkwsmsaml
      301 rylkqegrdt talmahvedl iiktiisael aiatacktfv phrsscfely gfdvlidstl
      361 kpwllevnls pslacdapld lkikasmisd mftvvgfvcq dpaqrtstrp iyptfessrr
      421 npfqkpqrpv saqfqsstvk qrsrplsasd aemknlvgsa rekvpgklgg svlglsmeei
      481 kvlrrvkeen drrggfirif ptsetweiyg sylehktsmn ymlatrlfqd rgnprrsllt
      541 grtrmvvdgt pelkvesmns raklhaalye rkllslevrk rrrrsgrlra mrpkypvitq
      601 paemnvktet eseeeeeval dnedeeqeay qeesagslge nqakytpslt vmienspken
      661 smkvpewnnk geqcckietq epepkfnlmq ilqdngnlsk vqariafsay lqhvqirlmk
      721 dsggqtfsas waakedeqme lvvrflkras snlqhslrmv lpsrrlalle rrrilahqlg
      781 dfisvynket eqmaekkskk kleeeeedgv nsenfqefir qaseaeleev ltfytqknks
      841 asvflgthsk ssknsnsfsd sgakgdhpet ieevkikqpk qqqtseihsd klsrfttsae
      901 keakliytns stsfsgpaap llqkipnthl ssvvtssdls pgsglhsisq vhpaipsmph
      961 qpavllstvp dsaslsihpg tqnvpspagl prcrsgsyti gpfssfqsaa hiysqklsrp
     1021 ssakagschp nkqhsgvara qkegedgspy srrynpsmvt aelqrlaekq aarqyspsth
     1081 islltqqvtn lnlassiinr ssastpptlr pvispsgptw siqsdpqape srstppgsrs
     1141 lqtggfaweg evennayska tgvvpqhkyh ptagsyqlhf alqqleqqkl qsrqlldqsr
     1201 arhqaifgsq tlpnsslwti nngaacrips atasgqkptt lpqkvvppas sssslvpkpp
     1261 pnhkqvlrka tsqraskgas aegqlnglqg slnsaafvpi tsstgsleap qvifarskpl
     1321 ptqsgalatv ighrkpksvk sgpi
//
LOCUS       XP_061012550            1332 aa            linear   MAM 02-DEC-2023
DEFINITION  tubulin polyglutamylase TTLL5 isoform X3 [Dama dama].
ACCESSION   XP_061012550
VERSION     XP_061012550.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156567.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1332
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1332
                     /product="tubulin polyglutamylase TTLL5 isoform X3"
                     /calculated_mol_wt=148347
     Region          117..395
                     /region_name="TTL"
                     /note="Tubulin-tyrosine ligase family; pfam03133"
                     /db_xref="CDD:397308"
     Region          <927..1318
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1332
                     /gene="TTLL5"
                     /coded_by="XM_061156567.1:234..4232"
                     /db_xref="GeneID:133065989"
ORIGIN      
        1 mpvvmardle etasssedee vvsqedhpci mwtggcrrip vlvfhaeail tkdnnirvig
       61 eryhlsykiv rtdsrlvrsi ltahgfhevh psstdynlmw tgshlkpfll rtlseaqkvn
      121 hfprsyeltr kdrlykniir mqhthgfkaf hilpqtfllp aeyaefcnsy skdrgpwivk
      181 pvassrgrgv ylinnpnqis leenilvsry innplliddf kfdvrlyvlv tsydplviyl
      241 yeeglarfat vrydqgakni rnqfmhltny svnkksgdyv scddpevedy gnkwsmsaml
      301 rylkqegrdt talmahvedl iiktiisael aiatacktfv phrsscfely gfdvlidstl
      361 kpwllevnls pslacdapld lkikasmisd mftvvgfvcq dpaqrtstrp iyptfessrr
      421 npfqkpqrpv saqfqsstvk qrsrplsasd aemknlvgsa rekvpgklgg svlglsmeei
      481 kvlrrvkeen drrggfirif ptsetweiyg sylehktsmn ymlatrlfqd rmvvdgtpel
      541 kvesmnsrak lhaalyerkl lslevrkrrr rsgrlramrp kypvitqpae mnvktetese
      601 eeeevaldne deeqeayqee sagslgenqa kytpsltvmi enspkensmk vpewnnkgeq
      661 cckietqepe pkfnlmqilq dngnlskvqa riafsaylqh vqirlmkdsg gqtfsaswaa
      721 kedeqmelvv rflkrassnl qhslrmvlps rrlallerrr ilahqlgdfi svynketeqm
      781 aekkskkkle eeeedgvnse nfqefirqas eaeleevltf ytqknksasv flgthskssk
      841 nsnsfsdsga kgdhpetiee vkikqpkqqq tseihsdkls rfttsaekea kliytnssts
      901 fsgpaapllq kipnthlssv vtssdlspgs glhsisqvhp aipsmphqpa vllstvpdsa
      961 slsihpgtqn vpspaglprc rsgsytigpf ssfqsaahiy sqklsrpssa kaagschpnk
     1021 qhsgvaraqk egedgspysr rynpsmvtae lqrlaekqaa rqyspsthis lltqqvtnln
     1081 lassiinrss astpptlrpv ispsgptwsi qsdpqapesr stppgsrslq tggfawegev
     1141 ennayskatg vvpqhkyhpt agsyqlhfal qqleqqklqs rqlldqsrar hqaifgsqtl
     1201 pnsslwtinn gaacripsat asgqkpttlp qkvvppasss sslvpkpppn hkqvlrkats
     1261 qraskgasae gqlnglqgsl nsaafvpits stgsleapqv ifarskplpt qsgalatvig
     1321 hrkpksvksg pi
//
LOCUS       XP_061012551            1331 aa            linear   MAM 02-DEC-2023
DEFINITION  tubulin polyglutamylase TTLL5 isoform X4 [Dama dama].
ACCESSION   XP_061012551
VERSION     XP_061012551.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156568.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1331
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1331
                     /product="tubulin polyglutamylase TTLL5 isoform X4"
                     /calculated_mol_wt=148268
     Region          117..395
                     /region_name="TTL"
                     /note="Tubulin-tyrosine ligase family; pfam03133"
                     /db_xref="CDD:397308"
     Region          <926..1317
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1331
                     /gene="TTLL5"
                     /coded_by="XM_061156568.1:234..4229"
                     /db_xref="GeneID:133065989"
ORIGIN      
        1 mpvvmardle etasssedee vvsqedhpci mwtggcrrip vlvfhaeail tkdnnirvig
       61 eryhlsykiv rtdsrlvrsi ltahgfhevh psstdynlmw tgshlkpfll rtlseaqkvn
      121 hfprsyeltr kdrlykniir mqhthgfkaf hilpqtfllp aeyaefcnsy skdrgpwivk
      181 pvassrgrgv ylinnpnqis leenilvsry innplliddf kfdvrlyvlv tsydplviyl
      241 yeeglarfat vrydqgakni rnqfmhltny svnkksgdyv scddpevedy gnkwsmsaml
      301 rylkqegrdt talmahvedl iiktiisael aiatacktfv phrsscfely gfdvlidstl
      361 kpwllevnls pslacdapld lkikasmisd mftvvgfvcq dpaqrtstrp iyptfessrr
      421 npfqkpqrsr plsasdaemk nlvgsarekv pgklggsvlg lsmeeikvlr rvkeendrrg
      481 gfirifptse tweiygsyle hktsmnymla trlfqdrgnp rrslltgrtr mvvdgtpelk
      541 vesmnsrakl haalyerkll slevrkrrrr sgrlramrpk ypvitqpaem nvktetesee
      601 eeevaldned eeqeayqees agslgenqak ytpsltvmie nspkensmkv pewnnkgeqc
      661 ckietqepep kfnlmqilqd ngnlskvqar iafsaylqhv qirlmkdsgg qtfsaswaak
      721 edeqmelvvr flkrassnlq hslrmvlpsr rlallerrri lahqlgdfis vynketeqma
      781 ekkskkklee eeedgvnsen fqefirqase aeleevltfy tqknksasvf lgthsksskn
      841 snsfsdsgak gdhpetieev kikqpkqqqt seihsdklsr fttsaekeak liytnsstsf
      901 sgpaapllqk ipnthlssvv tssdlspgsg lhsisqvhpa ipsmphqpav llstvpdsas
      961 lsihpgtqnv pspaglprcr sgsytigpfs sfqsaahiys qklsrpssak aagschpnkq
     1021 hsgvaraqke gedgspysrr ynpsmvtael qrlaekqaar qyspsthisl ltqqvtnlnl
     1081 assiinrssa stpptlrpvi spsgptwsiq sdpqapesrs tppgsrslqt ggfawegeve
     1141 nnayskatgv vpqhkyhpta gsyqlhfalq qleqqklqsr qlldqsrarh qaifgsqtlp
     1201 nsslwtinng aacripsata sgqkpttlpq kvvppassss slvpkpppnh kqvlrkatsq
     1261 raskgasaeg qlnglqgsln saafvpitss tgsleapqvi farskplptq sgalatvigh
     1321 rkpksvksgp i
//
LOCUS       XP_061012552            1331 aa            linear   MAM 02-DEC-2023
DEFINITION  tubulin polyglutamylase TTLL5 isoform X5 [Dama dama].
ACCESSION   XP_061012552
VERSION     XP_061012552.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156569.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1331
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1331
                     /product="tubulin polyglutamylase TTLL5 isoform X5"
                     /calculated_mol_wt=148276
     Region          117..395
                     /region_name="TTL"
                     /note="Tubulin-tyrosine ligase family; pfam03133"
                     /db_xref="CDD:397308"
     CDS             1..1331
                     /gene="TTLL5"
                     /coded_by="XM_061156569.1:234..4229"
                     /db_xref="GeneID:133065989"
ORIGIN      
        1 mpvvmardle etasssedee vvsqedhpci mwtggcrrip vlvfhaeail tkdnnirvig
       61 eryhlsykiv rtdsrlvrsi ltahgfhevh psstdynlmw tgshlkpfll rtlseaqkvn
      121 hfprsyeltr kdrlykniir mqhthgfkaf hilpqtfllp aeyaefcnsy skdrgpwivk
      181 pvassrgrgv ylinnpnqis leenilvsry innplliddf kfdvrlyvlv tsydplviyl
      241 yeeglarfat vrydqgakni rnqfmhltny svnkksgdyv scddpevedy gnkwsmsaml
      301 rylkqegrdt talmahvedl iiktiisael aiatacktfv phrsscfely gfdvlidstl
      361 kpwllevnls pslacdapld lkikasmisd mftvvgfvcq dpaqrtstrp iyptfessrr
      421 npfqkpqrpv saqfqsstvk qrsrplsasd aemknlvgsa rekvpgklgg svlglsmeei
      481 kvlrrvkeen drrggfirif ptsetweiyg sylehktsmn ymlatrlfqd rmvvdgtpel
      541 kvesmnsrak lhaalyerkl lslevrkrrr rsgrlramrp kypvitqpae mnvktetese
      601 eeeevaldne deeqeayqee sagslgenqa kytpsltvmi enspkensmk vpewnnkgeq
      661 cckietqepe pkfnlmqilq dngnlskvqa riafsaylqh vqirlmkdsg gqtfsaswaa
      721 kedeqmelvv rflkrassnl qhslrmvlps rrlallerrr ilahqlgdfi svynketeqm
      781 aekkskkkle eeeedgvnse nfqefirqas eaeleevltf ytqknksasv flgthskssk
      841 nsnsfsdsga kgdhpetiee vkikqpkqqq tseihsdkls rfttsaekea kliytnssts
      901 fsgpaapllq kipnthlssv vtssdlspgs glhsisqvhp aipsmphqpa vllstvpdsa
      961 slsihpgtqn vpspaglprc rsgsytigpf ssfqsaahiy sqklsrpssa kagschpnkq
     1021 hsgvaraqke gedgspysrr ynpsmvtael qrlaekqaar qyspsthisl ltqqvtnlnl
     1081 assiinrssa stpptlrpvi spsgptwsiq sdpqapesrs tppgsrslqt ggfawegeve
     1141 nnayskatgv vpqhkyhpta gsyqlhfalq qleqqklqsr qlldqsrarh qaifgsqtlp
     1201 nsslwtinng aacripsata sgqkpttlpq kvvppassss slvpkpppnh kqvlrkatsq
     1261 raskgasaeg qlnglqgsln saafvpitss tgsleapqvi farskplptq sgalatvigh
     1321 rkpksvksgp i
//
LOCUS       XP_061012553            1329 aa            linear   MAM 02-DEC-2023
DEFINITION  tubulin polyglutamylase TTLL5 isoform X6 [Dama dama].
ACCESSION   XP_061012553
VERSION     XP_061012553.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156570.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1329
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1329
                     /product="tubulin polyglutamylase TTLL5 isoform X6"
                     /calculated_mol_wt=148258
     Region          117..395
                     /region_name="TTL"
                     /note="Tubulin-tyrosine ligase family; pfam03133"
                     /db_xref="CDD:397308"
     Region          <924..1315
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1329
                     /gene="TTLL5"
                     /coded_by="XM_061156570.1:234..4223"
                     /db_xref="GeneID:133065989"
ORIGIN      
        1 mpvvmardle etasssedee vvsqedhpci mwtggcrrip vlvfhaeail tkdnnirvig
       61 eryhlsykiv rtdsrlvrsi ltahgfhevh psstdynlmw tgshlkpfll rtlseaqkvn
      121 hfprsyeltr kdrlykniir mqhthgfkaf hilpqtfllp aeyaefcnsy skdrgpwivk
      181 pvassrgrgv ylinnpnqis leenilvsry innplliddf kfdvrlyvlv tsydplviyl
      241 yeeglarfat vrydqgakni rnqfmhltny svnkksgdyv scddpevedy gnkwsmsaml
      301 rylkqegrdt talmahvedl iiktiisael aiatacktfv phrsscfely gfdvlidstl
      361 kpwllevnls pslacdapld lkikasmisd mftvvgfvcq dpaqrtstrp iyptfessrr
      421 npfqkpqrpv saqfqsstvk qrsrplsasd aemknlvgsa rekikvlrrv keendrrggf
      481 irifptsetw eiygsylehk tsmnymlatr lfqdrgnprr slltgrtrmv vdgtpelkve
      541 smnsraklha alyerkllsl evrkrrrrsg rlramrpkyp vitqpaemnv kteteseeee
      601 evaldnedee qeayqeesag slgenqakyt psltvmiens pkensmkvpe wnnkgeqcck
      661 ietqepepkf nlmqilqdng nlskvqaria fsaylqhvqi rlmkdsggqt fsaswaaked
      721 eqmelvvrfl krassnlqhs lrmvlpsrrl allerrrila hqlgdfisvy nketeqmaek
      781 kskkkleeee edgvnsenfq efirqaseae leevltfytq knksasvflg thskssknsn
      841 sfsdsgakgd hpetieevki kqpkqqqtse ihsdklsrft tsaekeakli ytnsstsfsg
      901 paapllqkip nthlssvvts sdlspgsglh sisqvhpaip smphqpavll stvpdsasls
      961 ihpgtqnvps paglprcrsg sytigpfssf qsaahiysqk lsrpssakaa gschpnkqhs
     1021 gvaraqkege dgspysrryn psmvtaelqr laekqaarqy spsthisllt qqvtnlnlas
     1081 siinrssast pptlrpvisp sgptwsiqsd pqapesrstp pgsrslqtgg fawegevenn
     1141 ayskatgvvp qhkyhptags yqlhfalqql eqqklqsrql ldqsrarhqa ifgsqtlpns
     1201 slwtinngaa cripsatasg qkpttlpqkv vppasssssl vpkpppnhkq vlrkatsqra
     1261 skgasaegql nglqgslnsa afvpitsstg sleapqvifa rskplptqsg alatvighrk
     1321 pksvksgpi
//
LOCUS       XP_061012555            1317 aa            linear   MAM 02-DEC-2023
DEFINITION  tubulin polyglutamylase TTLL5 isoform X7 [Dama dama].
ACCESSION   XP_061012555
VERSION     XP_061012555.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156572.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1317
                     /product="tubulin polyglutamylase TTLL5 isoform X7"
                     /calculated_mol_wt=146732
     Region          117..395
                     /region_name="TTL"
                     /note="Tubulin-tyrosine ligase family; pfam03133"
                     /db_xref="CDD:397308"
     CDS             1..1317
                     /gene="TTLL5"
                     /coded_by="XM_061156572.1:234..4187"
                     /db_xref="GeneID:133065989"
ORIGIN      
        1 mpvvmardle etasssedee vvsqedhpci mwtggcrrip vlvfhaeail tkdnnirvig
       61 eryhlsykiv rtdsrlvrsi ltahgfhevh psstdynlmw tgshlkpfll rtlseaqkvn
      121 hfprsyeltr kdrlykniir mqhthgfkaf hilpqtfllp aeyaefcnsy skdrgpwivk
      181 pvassrgrgv ylinnpnqis leenilvsry innplliddf kfdvrlyvlv tsydplviyl
      241 yeeglarfat vrydqgakni rnqfmhltny svnkksgdyv scddpevedy gnkwsmsaml
      301 rylkqegrdt talmahvedl iiktiisael aiatacktfv phrsscfely gfdvlidstl
      361 kpwllevnls pslacdapld lkikasmisd mftvvgfvcq dpaqrtstrp iyptfessrr
      421 npfqkpqrsr plsasdaemk nlvgsarekv pgklggsvlg lsmeeikvlr rvkeendrrg
      481 gfirifptse tweiygsyle hktsmnymla trlfqdrmvv dgtpelkves mnsraklhaa
      541 lyerkllsle vrkrrrrsgr lramrpkypv itqpaemnvk teteseeeee valdnedeeq
      601 eayqeesags lgenqakytp sltvmiensp kensmkvpew nnkgeqccki etqepepkfn
      661 lmqilqdngn lskvqariaf saylqhvqir lmkdsggqtf saswaakede qmelvvrflk
      721 rassnlqhsl rmvlpsrrla llerrrilah qlgdfisvyn keteqmaekk skkkleeeee
      781 dgvnsenfqe firqaseael eevltfytqk nksasvflgt hskssknsns fsdsgakgdh
      841 petieevkik qpkqqqtsei hsdklsrftt saekeakliy tnsstsfsgp aapllqkipn
      901 thlssvvtss dlspgsglhs isqvhpaips mphqpavlls tvpdsaslsi hpgtqnvpsp
      961 aglprcrsgs ytigpfssfq saahiysqkl srpssakags chpnkqhsgv araqkegedg
     1021 spysrrynps mvtaelqrla ekqaarqysp sthislltqq vtnlnlassi inrssastpp
     1081 tlrpvispsg ptwsiqsdpq apesrstppg srslqtggfa wegevennay skatgvvpqh
     1141 kyhptagsyq lhfalqqleq qklqsrqlld qsrarhqaif gsqtlpnssl wtinngaacr
     1201 ipsatasgqk pttlpqkvvp passssslvp kpppnhkqvl rkatsqrask gasaegqlng
     1261 lqgslnsaaf vpitsstgsl eapqvifars kplptqsgal atvighrkpk svksgpi
//
LOCUS       XP_061012556            1315 aa            linear   MAM 02-DEC-2023
DEFINITION  tubulin polyglutamylase TTLL5 isoform X8 [Dama dama].
ACCESSION   XP_061012556
VERSION     XP_061012556.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156573.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1315
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1315
                     /product="tubulin polyglutamylase TTLL5 isoform X8"
                     /calculated_mol_wt=146714
     Region          117..395
                     /region_name="TTL"
                     /note="Tubulin-tyrosine ligase family; pfam03133"
                     /db_xref="CDD:397308"
     Region          <910..1301
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1315
                     /gene="TTLL5"
                     /coded_by="XM_061156573.1:234..4181"
                     /db_xref="GeneID:133065989"
ORIGIN      
        1 mpvvmardle etasssedee vvsqedhpci mwtggcrrip vlvfhaeail tkdnnirvig
       61 eryhlsykiv rtdsrlvrsi ltahgfhevh psstdynlmw tgshlkpfll rtlseaqkvn
      121 hfprsyeltr kdrlykniir mqhthgfkaf hilpqtfllp aeyaefcnsy skdrgpwivk
      181 pvassrgrgv ylinnpnqis leenilvsry innplliddf kfdvrlyvlv tsydplviyl
      241 yeeglarfat vrydqgakni rnqfmhltny svnkksgdyv scddpevedy gnkwsmsaml
      301 rylkqegrdt talmahvedl iiktiisael aiatacktfv phrsscfely gfdvlidstl
      361 kpwllevnls pslacdapld lkikasmisd mftvvgfvcq dpaqrtstrp iyptfessrr
      421 npfqkpqrsr plsasdaemk nlvgsareki kvlrrvkeen drrggfirif ptsetweiyg
      481 sylehktsmn ymlatrlfqd rgnprrsllt grtrmvvdgt pelkvesmns raklhaalye
      541 rkllslevrk rrrrsgrlra mrpkypvitq paemnvktet eseeeeeval dnedeeqeay
      601 qeesagslge nqakytpslt vmienspken smkvpewnnk geqcckietq epepkfnlmq
      661 ilqdngnlsk vqariafsay lqhvqirlmk dsggqtfsas waakedeqme lvvrflkras
      721 snlqhslrmv lpsrrlalle rrrilahqlg dfisvynket eqmaekkskk kleeeeedgv
      781 nsenfqefir qaseaeleev ltfytqknks asvflgthsk ssknsnsfsd sgakgdhpet
      841 ieevkikqpk qqqtseihsd klsrfttsae keakliytns stsfsgpaap llqkipnthl
      901 ssvvtssdls pgsglhsisq vhpaipsmph qpavllstvp dsaslsihpg tqnvpspagl
      961 prcrsgsyti gpfssfqsaa hiysqklsrp ssakaagsch pnkqhsgvar aqkegedgsp
     1021 ysrrynpsmv taelqrlaek qaarqyspst hislltqqvt nlnlassiin rssastpptl
     1081 rpvispsgpt wsiqsdpqap esrstppgsr slqtggfawe gevennaysk atgvvpqhky
     1141 hptagsyqlh falqqleqqk lqsrqlldqs rarhqaifgs qtlpnsslwt inngaacrip
     1201 satasgqkpt tlpqkvvppa ssssslvpkp ppnhkqvlrk atsqraskga saegqlnglq
     1261 gslnsaafvp itsstgslea pqvifarskp lptqsgalat vighrkpksv ksgpi
//
LOCUS       XP_061012557            1315 aa            linear   MAM 02-DEC-2023
DEFINITION  tubulin polyglutamylase TTLL5 isoform X9 [Dama dama].
ACCESSION   XP_061012557
VERSION     XP_061012557.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156574.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1315
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1315
                     /product="tubulin polyglutamylase TTLL5 isoform X9"
                     /calculated_mol_wt=146498
     Region          87..365
                     /region_name="TTL"
                     /note="Tubulin-tyrosine ligase family; pfam03133"
                     /db_xref="CDD:397308"
     Region          <910..1301
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1315
                     /gene="TTLL5"
                     /coded_by="XM_061156574.1:313..4260"
                     /db_xref="GeneID:133065989"
ORIGIN      
        1 mwtggcrrip vlvfhaeail tkdnnirvig eryhlsykiv rtdsrlvrsi ltahgfhevh
       61 psstdynlmw tgshlkpfll rtlseaqkvn hfprsyeltr kdrlykniir mqhthgfkaf
      121 hilpqtfllp aeyaefcnsy skdrgpwivk pvassrgrgv ylinnpnqis leenilvsry
      181 innplliddf kfdvrlyvlv tsydplviyl yeeglarfat vrydqgakni rnqfmhltny
      241 svnkksgdyv scddpevedy gnkwsmsaml rylkqegrdt talmahvedl iiktiisael
      301 aiatacktfv phrsscfely gfdvlidstl kpwllevnls pslacdapld lkikasmisd
      361 mftvvgfvcq dpaqrtstrp iyptfessrr npfqkpqrpv saqfqsstvk qrsrplsasd
      421 aemknlvgsa rekvpgklgg svlglsmeei kvlrrvkeen drrggfirif ptsetweiyg
      481 sylehktsmn ymlatrlfqd rgnprrsllt grtrmvvdgt pelkvesmns raklhaalye
      541 rkllslevrk rrrrsgrlra mrpkypvitq paemnvktet eseeeeeval dnedeeqeay
      601 qeesagslge nqakytpslt vmienspken smkvpewnnk geqcckietq epepkfnlmq
      661 ilqdngnlsk vqariafsay lqhvqirlmk dsggqtfsas waakedeqme lvvrflkras
      721 snlqhslrmv lpsrrlalle rrrilahqlg dfisvynket eqmaekkskk kleeeeedgv
      781 nsenfqefir qaseaeleev ltfytqknks asvflgthsk ssknsnsfsd sgakgdhpet
      841 ieevkikqpk qqqtseihsd klsrfttsae keakliytns stsfsgpaap llqkipnthl
      901 ssvvtssdls pgsglhsisq vhpaipsmph qpavllstvp dsaslsihpg tqnvpspagl
      961 prcrsgsyti gpfssfqsaa hiysqklsrp ssakaagsch pnkqhsgvar aqkegedgsp
     1021 ysrrynpsmv taelqrlaek qaarqyspst hislltqqvt nlnlassiin rssastpptl
     1081 rpvispsgpt wsiqsdpqap esrstppgsr slqtggfawe gevennaysk atgvvpqhky
     1141 hptagsyqlh falqqleqqk lqsrqlldqs rarhqaifgs qtlpnsslwt inngaacrip
     1201 satasgqkpt tlpqkvvppa ssssslvpkp ppnhkqvlrk atsqraskga saegqlnglq
     1261 gslnsaafvp itsstgslea pqvifarskp lptqsgalat vighrkpksv ksgpi
//
LOCUS       XP_061012558            1312 aa            linear   MAM 02-DEC-2023
DEFINITION  tubulin polyglutamylase TTLL5 isoform X10 [Dama dama].
ACCESSION   XP_061012558
VERSION     XP_061012558.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156575.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1312
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1312
                     /product="tubulin polyglutamylase TTLL5 isoform X10"
                     /calculated_mol_wt=146554
     Region          117..395
                     /region_name="TTL"
                     /note="Tubulin-tyrosine ligase family; pfam03133"
                     /db_xref="CDD:397308"
     CDS             1..1312
                     /gene="TTLL5"
                     /coded_by="XM_061156575.1:234..4172"
                     /db_xref="GeneID:133065989"
ORIGIN      
        1 mpvvmardle etasssedee vvsqedhpci mwtggcrrip vlvfhaeail tkdnnirvig
       61 eryhlsykiv rtdsrlvrsi ltahgfhevh psstdynlmw tgshlkpfll rtlseaqkvn
      121 hfprsyeltr kdrlykniir mqhthgfkaf hilpqtfllp aeyaefcnsy skdrgpwivk
      181 pvassrgrgv ylinnpnqis leenilvsry innplliddf kfdvrlyvlv tsydplviyl
      241 yeeglarfat vrydqgakni rnqfmhltny svnkksgdyv scddpevedy gnkwsmsaml
      301 rylkqegrdt talmahvedl iiktiisael aiatacktfv phrsscfely gfdvlidstl
      361 kpwllevnls pslacdapld lkikasmisd mftvvgfvcq dpaqrtstrp iyptfessrr
      421 npfqkpqrpv saqfqsstvk qrsrplsasd aemknlvgsa rekvpgklgg svlglsmeei
      481 kvlrrvkeen drrggfirif ptsetweiyg sylehktsmn ymlatrlfqd rgnprrsllt
      541 grtrmvvdgt pelkvesmns raklhaalye rkllslevrk rrrrsgrlra mrpkypvitq
      601 paemnvktet eseeeeeval dnedeeqeay qeesagslge nqakytpslt vmienspken
      661 smkvpewnnk geqcckietq epepkfnlmq ilqdngnlsk vqariafsay lqhvqirlmk
      721 dsggqtfsas waakedeqme lvvrflkras snlqhslrmv lpsrrlalle rrrilahqlg
      781 dfisvynket eqmaekkskk kleeeeedgv nsenfqefir qaseaeleev ltfytqknks
      841 asvflgthsk ssknsnsfsd sgakgdhpet ieevkikqpk qqqtseihsd klsrfttsae
      901 keakliytns stsfsgpaap llqkipnthl ssvvtssdls pgsglhsisq vhpaipsmph
      961 qpavllstvp dsaslsihpg tqnvpspagl prcrsgsyti gpfssfqsaa hiysqklsrp
     1021 ssakaagsch pnkqhsgvar aqkegedgsp ysrrynpsmv taelqrlaek qaarqyspst
     1081 hislltqqvt nlnlassiin rssastpptl rpvispsgpt wsiqsdpqap esrstppgsr
     1141 slqtggfawe gevennaysk atgvvpqhky hptagsyqlh falqqleqqk lqsrqlldqs
     1201 rarhqaifgs qtlpnsslwt inngaacrip satasgqkpt tlpqkvvppa ssssslvpkp
     1261 ppnhkqvlrk atsqraskga saegqlnglq gslnsaafvp itsstdpiht kr
//
LOCUS       XP_061012559             155 aa            linear   MAM 02-DEC-2023
DEFINITION  ergosterol biosynthetic protein 28 homolog isoform X1 [Dama dama].
ACCESSION   XP_061012559
VERSION     XP_061012559.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156576.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..155
                     /product="ergosterol biosynthetic protein 28 homolog
                     isoform X1"
                     /calculated_mol_wt=17286
     Region          23..134
                     /region_name="Erg28"
                     /note="Erg28 like protein; pfam03694"
                     /db_xref="CDD:461015"
     CDS             1..155
                     /gene="LOC133065991"
                     /coded_by="XM_061156576.1:136..603"
                     /db_xref="GeneID:133065991"
ORIGIN      
        1 mkkawqkals gwrgamsrfl nvlrswlvmv sivaagnslq sfrdhtflye klytgkpdqv
       61 nglqartygi wtllssvvrc lcaidihnkt lyyitlwtff lamghflcel fvfgtaapti
      121 gvmaplmvas isilgmlvgl lhleaepgsr qkkrn
//
LOCUS       XP_061012560             140 aa            linear   MAM 02-DEC-2023
DEFINITION  ergosterol biosynthetic protein 28 homolog isoform X2 [Dama dama].
ACCESSION   XP_061012560
VERSION     XP_061012560.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156577.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..140
                     /product="ergosterol biosynthetic protein 28 homolog
                     isoform X2"
                     /calculated_mol_wt=15586
     Region          8..119
                     /region_name="Erg28"
                     /note="Erg28 like protein; pfam03694"
                     /db_xref="CDD:461015"
     CDS             1..140
                     /gene="LOC133065991"
                     /coded_by="XM_061156577.1:416..838"
                     /db_xref="GeneID:133065991"
ORIGIN      
        1 msrflnvlrs wlvmvsivaa gnslqsfrdh tflyeklytg kpdqvnglqa rtygiwtlls
       61 svvrclcaid ihnktlyyit lwtfflamgh flcelfvfgt aaptigvmap lmvasisilg
      121 mlvgllhlea epgsrqkkrn
//
LOCUS       XP_061012561             432 aa            linear   MAM 02-DEC-2023
DEFINITION  heme transporter FLVCR2-like [Dama dama].
ACCESSION   XP_061012561
VERSION     XP_061012561.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156578.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..432
                     /product="heme transporter FLVCR2-like"
                     /calculated_mol_wt=47325
     Region          7..412
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(22..23,26..27,30,62,115..116,118..120,123,143,
                     146..147,150,241,244..245,248..250,253,281,285,338..339,
                     343,347,363,366..367,370..371,374)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:341014"
     CDS             1..432
                     /gene="LOC133065993"
                     /coded_by="XM_061156578.1:1..1299"
                     /db_xref="GeneID:133065993"
ORIGIN      
        1 mikvskrrwa vvlvsscysm cnafqwiqya ainnifmyfy gvssfaidwl smcymlayip
       61 lllpvawllk kfglrtialt gsalnclgaw vkvgspqphl fpvtvlgqvi csvaqvfilg
      121 mpsriasvwf gddevstacs iavlgnqlgi algflvpavs apniddpdel ayhisimfyi
      181 tagvatllfi lvlivfkekp khppsrnqcl syafvspdas flssiisvfk kqnfvllfis
      241 yglnagafya lctllnrmvi fhytgegmiv grigltitva gmlgtvisgi wldrtktyke
      301 ttlvlyimtl vgmagytgtl nlghlwivyi tagiigfsit gyltlgfefa meltypesev
      361 vsscllnvsa qvfgiiftis qgqimdnygt mpgniflcvl ltlgavltaf ikadlrrqrl
      421 lkifreievi gg
//
LOCUS       XP_061012562             140 aa            linear   MAM 02-DEC-2023
DEFINITION  ergosterol biosynthetic protein 28 homolog [Dama dama].
ACCESSION   XP_061012562
VERSION     XP_061012562.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156579.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..140
                     /product="ergosterol biosynthetic protein 28 homolog"
                     /calculated_mol_wt=15566
     Region          8..119
                     /region_name="Erg28"
                     /note="Erg28 like protein; pfam03694"
                     /db_xref="CDD:461015"
     CDS             1..140
                     /gene="LOC133065994"
                     /coded_by="XM_061156579.1:171..593"
                     /db_xref="GeneID:133065994"
ORIGIN      
        1 msrflnvlrs wlvmtsviav ccslqgfrdh tflyekiyis kpdlvnglqa rafgiwmlls
       61 svvcglcaid ihnktlyyit lltffiamgh ivfelfvfgi maptigiiap ltvasisilg
      121 mlvglwhlka epgsrqkkrn
//
LOCUS       XP_061012563             140 aa            linear   MAM 02-DEC-2023
DEFINITION  ergosterol biosynthetic protein 28 homolog [Dama dama].
ACCESSION   XP_061012563
VERSION     XP_061012563.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156580.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..140
                     /product="ergosterol biosynthetic protein 28 homolog"
                     /calculated_mol_wt=15566
     Region          8..119
                     /region_name="Erg28"
                     /note="Erg28 like protein; pfam03694"
                     /db_xref="CDD:461015"
     CDS             1..140
                     /gene="LOC133065994"
                     /coded_by="XM_061156580.1:216..638"
                     /db_xref="GeneID:133065994"
ORIGIN      
        1 msrflnvlrs wlvmtsviav ccslqgfrdh tflyekiyis kpdlvnglqa rafgiwmlls
       61 svvcglcaid ihnktlyyit lltffiamgh ivfelfvfgi maptigiiap ltvasisilg
      121 mlvglwhlka epgsrqkkrn
//
LOCUS       XP_061012564             140 aa            linear   MAM 02-DEC-2023
DEFINITION  ergosterol biosynthetic protein 28 homolog [Dama dama].
ACCESSION   XP_061012564
VERSION     XP_061012564.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156581.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..140
                     /product="ergosterol biosynthetic protein 28 homolog"
                     /calculated_mol_wt=15566
     Region          8..119
                     /region_name="Erg28"
                     /note="Erg28 like protein; pfam03694"
                     /db_xref="CDD:461015"
     CDS             1..140
                     /gene="LOC133065994"
                     /coded_by="XM_061156581.1:77..499"
                     /db_xref="GeneID:133065994"
ORIGIN      
        1 msrflnvlrs wlvmtsviav ccslqgfrdh tflyekiyis kpdlvnglqa rafgiwmlls
       61 svvcglcaid ihnktlyyit lltffiamgh ivfelfvfgi maptigiiap ltvasisilg
      121 mlvglwhlka epgsrqkkrn
//
LOCUS       XP_061012565             140 aa            linear   MAM 02-DEC-2023
DEFINITION  ergosterol biosynthetic protein 28 homolog [Dama dama].
ACCESSION   XP_061012565
VERSION     XP_061012565.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156582.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..140
                     /product="ergosterol biosynthetic protein 28 homolog"
                     /calculated_mol_wt=15815
     Region          8..119
                     /region_name="Erg28"
                     /note="Erg28 like protein; pfam03694"
                     /db_xref="CDD:461015"
     CDS             1..140
                     /gene="LOC133065996"
                     /coded_by="XM_061156582.1:73..495"
                     /db_xref="GeneID:133065996"
ORIGIN      
        1 msrflnvlrs wlvmtsviav ghslqsfrdh tflyekiyts kpdlvnglqa rtfgvwtlls
       61 svvrglcaid ihnrtlyyit lwtffigmgh flfemfvfgt vaptifmlai ltvasisilg
      121 mlvglrhlea epgsrqkkrn
//
LOCUS       XP_061012566             140 aa            linear   MAM 02-DEC-2023
DEFINITION  ergosterol biosynthetic protein 28 homolog [Dama dama].
ACCESSION   XP_061012566
VERSION     XP_061012566.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156583.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..140
                     /product="ergosterol biosynthetic protein 28 homolog"
                     /calculated_mol_wt=15815
     Region          8..119
                     /region_name="Erg28"
                     /note="Erg28 like protein; pfam03694"
                     /db_xref="CDD:461015"
     CDS             1..140
                     /gene="LOC133065996"
                     /coded_by="XM_061156583.1:161..583"
                     /db_xref="GeneID:133065996"
ORIGIN      
        1 msrflnvlrs wlvmtsviav ghslqsfrdh tflyekiyts kpdlvnglqa rtfgvwtlls
       61 svvrglcaid ihnrtlyyit lwtffigmgh flfemfvfgt vaptifmlai ltvasisilg
      121 mlvglrhlea epgsrqkkrn
//
LOCUS       XP_061012568             552 aa            linear   MAM 02-DEC-2023
DEFINITION  heme transporter FLVCR2 isoform X1 [Dama dama].
ACCESSION   XP_061012568
VERSION     XP_061012568.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156585.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..552
                     /product="heme transporter FLVCR2 isoform X1"
                     /calculated_mol_wt=59941
     Region          107..512
                     /region_name="MFS_FLVCR2"
                     /note="Feline leukemia virus subgroup C receptor-related
                     protein 2 of the Major Facilitator Superfamily of
                     transporters; cd17456"
                     /db_xref="CDD:341014"
     Site            order(122..123,126..127,130,162,215..216,218..220,223,243,
                     246..247,250,341,344..345,348..350,353,381,385,438..439,
                     443,447,463,466..467,470..471,474)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:341014"
     CDS             1..552
                     /gene="FLVCR2"
                     /coded_by="XM_061156585.1:413..2071"
                     /db_xref="GeneID:133065997"
ORIGIN      
        1 mvnedpnqqd hdgtpsqtsa lqehpnlsih pslsahpsvs ihpsvsahps vsahpsvsah
       61 psvsihpsvs vypsssahps tlaqpsgliq psssgpedls vikvskrrwa vvlvfscysm
      121 cnafqwiqyg sinnifmnfy gvsafaidwl smcymltyip lllpvawlle kfglrtiala
      181 gsalnclgaw vklgslkphl fpvtvlgqvi csvaqvfilg mpsriasvwf ganevstacs
      241 iavfgnqlgi aigflvppvl vpnikdqdkl ayhisimfyi iagvatllfi lviivfkekp
      301 khppsraqsl syalastdas ylssiirlfk nlnfvllvit yglnagafya lstlltrmvi
      361 fhypgeevna grigltivla gmlgavisgi wldrtktyke ttlvvyimtl vgmvvytytl
      421 nlghlwvvfi tagamgffmt gylplgfefa veltypeseg mssgllnvsa qvfgiiftis
      481 qgqiidnygt mpgniflcvf ltlgavltaf ikadlrrqda nkeipenkpq egeeeedsks
      541 skapttvree rf
//
LOCUS       XP_061012569             515 aa            linear   MAM 02-DEC-2023
DEFINITION  heme transporter FLVCR2 isoform X2 [Dama dama].
ACCESSION   XP_061012569
VERSION     XP_061012569.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156586.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..515
                     /product="heme transporter FLVCR2 isoform X2"
                     /calculated_mol_wt=55867
     Region          107..475
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(122..123,126..127,130,162,215..216,218..220,223,243,
                     246..247,250,341,344..345,348..350,353,381,385,401..402,
                     406,410,426,429..430,433..434,437)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:341014"
     CDS             1..515
                     /gene="FLVCR2"
                     /coded_by="XM_061156586.1:414..1961"
                     /db_xref="GeneID:133065997"
ORIGIN      
        1 mvnedpnqqd hdgtpsqtsa lqehpnlsih pslsahpsvs ihpsvsahps vsahpsvsah
       61 psvsihpsvs vypsssahps tlaqpsgliq psssgpedls vikvskrrwa vvlvfscysm
      121 cnafqwiqyg sinnifmnfy gvsafaidwl smcymltyip lllpvawlle kfglrtiala
      181 gsalnclgaw vklgslkphl fpvtvlgqvi csvaqvfilg mpsriasvwf ganevstacs
      241 iavfgnqlgi aigflvppvl vpnikdqdkl ayhisimfyi iagvatllfi lviivfkekp
      301 khppsraqsl syalastdas ylssiirlfk nlnfvllvit yglnagafya lstlltrmvi
      361 fhypgeevna grigltivla gmlgavisgi wldrtktynf fmtgylplgf efaveltype
      421 segmssglln vsaqvfgiif tisqgqiidn ygtmpgnifl cvfltlgavl tafikadlrr
      481 qdankeipen kpqegeeeed sksskapttv reerf
//
LOCUS       XP_061012570             125 aa            linear   MAM 02-DEC-2023
DEFINITION  basic leucine zipper transcriptional factor ATF-like [Dama dama].
ACCESSION   XP_061012570
VERSION     XP_061012570.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156587.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..125
                     /product="basic leucine zipper transcriptional factor
                     ATF-like"
                     /calculated_mol_wt=14088
     Region          26..83
                     /region_name="bZIP_BATF"
                     /note="Basic leucine zipper (bZIP) domain of BATF
                     proteins: a DNA-binding and dimerization domain; cd14701"
                     /db_xref="CDD:269849"
     Region          28..82
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269849"
     Site            order(32..33,35..37,39..44,46..48)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269849"
     Site            order(47,50..51,54..55,57..58,61..62,64..65,68..69,71..72,
                     75..76,78..79)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269849"
     CDS             1..125
                     /gene="BATF"
                     /coded_by="XM_061156587.1:245..622"
                     /db_xref="GeneID:133065998"
ORIGIN      
        1 mphssdssds sfsrspppsk qdssddvrkv qrreknriaa qksrqrqtqk adtlhlesed
       61 lekqnaalrk eikqlteemk yftsvlsshe plcsvlvpst psppevvysp hpfhqphvss
      121 prfqp
//
LOCUS       XP_061012571             188 aa            linear   MAM 02-DEC-2023
DEFINITION  jun dimerization protein 2 isoform X1 [Dama dama].
ACCESSION   XP_061012571
VERSION     XP_061012571.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156588.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..188
                     /product="jun dimerization protein 2 isoform X1"
                     /calculated_mol_wt=21064
     Region          107..160
                     /region_name="bZIP_ATF3"
                     /note="Basic leucine zipper (bZIP) domain of Activating
                     Transcription Factor-3 (ATF-3) and similar proteins: a
                     DNA-binding and dimerization domain; cd14722"
                     /db_xref="CDD:269870"
     Region          107..157
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269870"
     Site            order(118,121..122,125..126,128..129,132..133,135..136,
                     139..140,142..143,146..147,149..150,153..154,156..157)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269870"
     CDS             1..188
                     /gene="JDP2"
                     /coded_by="XM_061156588.1:118..684"
                     /db_xref="GeneID:133065999"
ORIGIN      
        1 mcttdlhail gasqlivgwt atppammpgq ipdpsvtags lpglgpltgl pssaltaeel
       61 kyadirniga miaplhflev klgkrpqpvk seldeeeerr krrreknkva aarcrnkkke
      121 rteflqrese rlelmnaelk tqieelkqer qqlilmlnrh rptcivrtds vktpesegnp
      181 lleqlekk
//
LOCUS       XP_061012572             163 aa            linear   MAM 02-DEC-2023
DEFINITION  jun dimerization protein 2 isoform X2 [Dama dama].
ACCESSION   XP_061012572
VERSION     XP_061012572.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156589.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..163
                     /product="jun dimerization protein 2 isoform X2"
                     /calculated_mol_wt=18514
     Region          82..135
                     /region_name="bZIP"
                     /note="Basic leucine zipper (bZIP) domain of bZIP
                     transcription factors: a DNA-binding and dimerization
                     domain; cl21462"
                     /db_xref="CDD:473870"
     Region          82..126
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269834"
     Site            order(93,96..97,100..101,103..104,107..108,110..111,
                     114..115,117..118,121..122,124..125)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269834"
     CDS             1..163
                     /gene="JDP2"
                     /coded_by="XM_061156589.1:179..670"
                     /db_xref="GeneID:133065999"
ORIGIN      
        1 mmpgqipdps vtagslpglg pltglpssal taeelkyadi rnigamiapl hflevklgkr
       61 pqpvkselde eeerrkrrre knkvaaarcr nkkkertefl qreserlelm naelktqiee
      121 lkqerqqlil mlnrhrptci vrtdsvktpe segnplleql ekk
//
LOCUS       XP_061012573             163 aa            linear   MAM 02-DEC-2023
DEFINITION  jun dimerization protein 2 isoform X2 [Dama dama].
ACCESSION   XP_061012573
VERSION     XP_061012573.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156590.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..163
                     /product="jun dimerization protein 2 isoform X2"
                     /calculated_mol_wt=18514
     Region          82..135
                     /region_name="bZIP"
                     /note="Basic leucine zipper (bZIP) domain of bZIP
                     transcription factors: a DNA-binding and dimerization
                     domain; cl21462"
                     /db_xref="CDD:473870"
     Region          82..126
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269834"
     Site            order(93,96..97,100..101,103..104,107..108,110..111,
                     114..115,117..118,121..122,124..125)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269834"
     CDS             1..163
                     /gene="JDP2"
                     /coded_by="XM_061156590.1:115..606"
                     /db_xref="GeneID:133065999"
ORIGIN      
        1 mmpgqipdps vtagslpglg pltglpssal taeelkyadi rnigamiapl hflevklgkr
       61 pqpvkselde eeerrkrrre knkvaaarcr nkkkertefl qreserlelm naelktqiee
      121 lkqerqqlil mlnrhrptci vrtdsvktpe segnplleql ekk
//
LOCUS       XP_061012574             380 aa            linear   MAM 02-DEC-2023
DEFINITION  protein c-Fos [Dama dama].
ACCESSION   XP_061012574
VERSION     XP_061012574.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156591.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..380
                     /product="protein c-Fos"
                     /calculated_mol_wt=40622
     Region          147..200
                     /region_name="bZIP_Fos"
                     /note="Basic leucine zipper (bZIP) domain of the oncogene
                     Fos (Fos): a DNA-binding and dimerization domain; cd14721"
                     /db_xref="CDD:269869"
     Region          147..199
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269869"
     Site            order(158,161..162,165..166,168..169,172..173,175..176,
                     179..180,182..183,186..187,189..190,193..194,196..197)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269869"
     CDS             1..380
                     /gene="FOS"
                     /coded_by="XM_061156591.1:174..1316"
                     /db_xref="GeneID:133066000"
ORIGIN      
        1 mmfsgfnady easssrcssa spagdslsyy hspadsfssm gspvnaqdyc tdlavssanf
       61 iptvtaists pdlqwlvqpt lvssvapsqt raphpygvpt psagaysrag vmktmtggra
      121 qsigrrgkme qlspeeeekr rirrernkma aakcrnrrre ltdtlqaetd qledeksalq
      181 teianllkek eklefilaah rpackipddl gfpeemsvas ldlsgglpea atpeseeaft
      241 lpllndpepk psvepvksvg smelkaepfd dfmfpassrp sgsetarsvp dmdlsgsfya
      301 adweplhggs lgmgpmatel eplctpvvtc tpscttytss fvftypeads fpscaaahrk
      361 gsssnepssd slssptllal
//
LOCUS       XP_061012575             219 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane emp24 domain-containing protein 10 [Dama dama].
ACCESSION   XP_061012575
VERSION     XP_061012575.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156592.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..219
                     /product="transmembrane emp24 domain-containing protein
                     10"
                     /calculated_mol_wt=24755
     Region          32..213
                     /region_name="EMP24_GP25L"
                     /note="emp24/gp25L/p24 family/GOLD; pfam01105"
                     /db_xref="CDD:426051"
     CDS             1..219
                     /gene="TMED10"
                     /coded_by="XM_061156592.1:66..725"
                     /db_xref="GeneID:133066001"
ORIGIN      
        1 msgssgpqar rgpcpfalll llllgpssvl tisfhlpvns rkclreeihk dllvtgayei
       61 tdqsggaggl rthlkitdsa ghilyskeda tkgkfaftte dydmfevcfe skgtgripdq
      121 lvildmkhgv eaknyeeiak veklkpleve lrrledlses ivndfaymkk reeemrdtne
      181 stntrvlyfs ifsmfcligl atwqvfylrr ffkakklie
//
LOCUS       XP_061012576             977 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase Nek9 [Dama dama].
ACCESSION   XP_061012576
VERSION     XP_061012576.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156593.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..977
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..977
                     /product="serine/threonine-protein kinase Nek9"
                     /calculated_mol_wt=106947
     Region          51..308
                     /region_name="STKc_Nek9"
                     /note="Catalytic domain of the Protein Serine/Threonine
                     Kinase, Never In Mitosis gene A (NIMA)-related kinase 9;
                     cd08221"
                     /db_xref="CDD:270860"
     Site            order(58..62,66,79,81,112,128..131,135,137,176,178,
                     180..181,183,194,197,199,213..216)
                     /site_type="active"
                     /db_xref="CDD:270860"
     Site            order(58..59,61..62,66,79,81,112,129..131,135,181,183,199)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270860"
     Site            order(62,135,137,176,178,180,197,213..216)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270860"
     Site            order(193..205,207..216)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270860"
     Region          372..745
                     /region_name="ATS1"
                     /note="Alpha-tubulin suppressor ATS1 and related RCC1
                     domain-containing proteins [Cell cycle control, cell
                     division, chromosome partitioning, Cytoskeleton]; COG5184"
                     /db_xref="CDD:444065"
     CDS             1..977
                     /gene="NEK9"
                     /coded_by="XM_061156593.1:131..3064"
                     /db_xref="GeneID:133066003"
ORIGIN      
        1 msvlgeyerh cdslnsdfgs esggggdsgp gpsagpapra gggaaeqeel hyipirvlgr
       61 gafgeatlyr rteddslvvw kevdltrlse kerrdalnei vilallqhdn iiayynhfmd
      121 nttllieley cnggnlydki lrqkdklfee emvvwylfqi vsavscihka gilhrdiktl
      181 nifltkanli klgdyglakk lnseysmaet lvgtpyymsp elcqgvkynf ksdiwavgcv
      241 ifelltlkrt fdatnplnlc vkivqgiram evdssqysle liqmvhacld qdpeqrptad
      301 elldrpllrk rrremeekvt llnaptkrpr sstvteapia vvtsrtsevy vwgggkstpq
      361 kldviksgcs arqvcagnth favvtvekel ytwvnmqggt klhgqlghgd kasyrqpkhv
      421 eklqgkairq vscgddftvc vtdegqlyaf gsdyygcmgv dkvagpevle pmqldfflsn
      481 pveqvscgdn hvvvltrnkd vyswgcgeyg rlgldseedy ytpqkvdvpk aliivavqcg
      541 cdgtflltqs gkvlacglne fnklglnqcm sgiinheayh evpyttsftl akqlsfykir
      601 tiapgkthta aidergrllt fgcnkcgqlg vgnykkrlgi nllrgplggk qvirvscgde
      661 ftiaatddnh ifawgnggng rlamtpterp hgsdictswp rpifgslhhv pdlscrgwht
      721 ilivekvlns ktirsnssgl sigtvvqsss pgggsgggre eedsqqeset pdpsggfrgt
      781 meadrgmegl vspteamris sgassscpgw lrkelenaef ipmpdspspl saafsesekd
      841 tlpydelqgl kmaseepleh kppagawppr lnpagtcagk gtplaptcac stlqveverl
      901 qglvlkclae qqklqqenlq iftqlqklnn kleggqqvgm hsrgtqtake etevdpkpdl
      961 dsdswcllgt dscrpsl
//
LOCUS       XP_061012577             530 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger C2HC domain-containing protein 1C [Dama dama].
ACCESSION   XP_061012577
VERSION     XP_061012577.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156594.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..530
                     /product="zinc finger C2HC domain-containing protein 1C"
                     /calculated_mol_wt=60753
     Region          183..>262
                     /region_name="tolA"
                     /note="cell envelope integrity inner membrane protein
                     TolA; Provisional; PRK09510"
                     /db_xref="CDD:236545"
     Region          384..407
                     /region_name="zf-C2HC_2"
                     /note="zinc-finger of a C2HC-type; pfam13913"
                     /db_xref="CDD:464037"
     Region          494..516
                     /region_name="zf-C2HC_2"
                     /note="zinc-finger of a C2HC-type; pfam13913"
                     /db_xref="CDD:464037"
     CDS             1..530
                     /gene="ZC2HC1C"
                     /coded_by="XM_061156594.1:123..1715"
                     /db_xref="GeneID:133066004"
ORIGIN      
        1 maglqlalpl pigvmlphnk rdapelhsak qdpyrksdss qlssaghprn nfqqkllsnq
       61 elmldnlyth pkwnsctkaq sysyphcagm sqhdprsnpq gqakglfyts dpqsrypktn
      121 dqefipltkk rvgvdraypl kpvfhrkshs tgeagtdgdq nasprtpepr kysyssfgsr
      181 nwvnslmvgp vaatqeervm anasrtewmq iqrleaagei lgeeisrket llreklkkte
      241 eelrriqkek eqaeenekre lqrmvlsrrr vkdnsittyk pifspafgse evfnrdtged
      301 etwgqseenc spfhfsdyri qklkrerlma snnkirdpvs gplkekfsqa petplntlrr
      361 ytsnsrssra pdssgsrrpt eepelgecsh cgrkflllrl erhssiccrm qgskrkvfds
      421 srarakgtel eqylnwkgpa svkakppwks nwrqkhesfi rtlrqarefq qviakggnps
      481 dlppilpven pdyiqcphcs rhfapkvaer hipkcktikn rpppprkhyn
//
LOCUS       XP_061012578             101 aa            linear   MAM 02-DEC-2023
DEFINITION  acylphosphatase-1 [Dama dama].
ACCESSION   XP_061012578
VERSION     XP_061012578.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156595.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..101
                     /product="acylphosphatase-1"
                     /calculated_mol_wt=11315
     Region          12..99
                     /region_name="Acylphosphatase"
                     /note="pfam00708"
                     /db_xref="CDD:425830"
     CDS             1..101
                     /gene="ACYP1"
                     /coded_by="XM_061156595.1:127..432"
                     /db_xref="GeneID:133066005"
ORIGIN      
        1 msmaegdtli svdyeifgkv qgvffrkytq aegkklglvg wvqntdqgtv qgqlqgptsk
       61 vrhmqewlet kgspkshidr asfhnekvii kldyadfqiv k
//
LOCUS       XP_061012580            1461 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA mismatch repair protein Mlh3 isoform X1 [Dama dama].
ACCESSION   XP_061012580
VERSION     XP_061012580.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156597.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1461
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1461
                     /product="DNA mismatch repair protein Mlh3 isoform X1"
                     /calculated_mol_wt=164097
     Region          9..192
                     /region_name="HATPase_MutL-MLH-PMS-like"
                     /note="Histidine kinase-like ATPase domain of DNA mismatch
                     repair proteins Escherichia coli MutL, human MutL homologs
                     (MLH/ PMS), and related domains; cd16926"
                     /db_xref="CDD:340403"
     Site            order(28,32..33,35..36,54,56,58,60..61,69,74..77,94..97,
                     109,111,143..144,146)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340403"
     Site            order(70,97)
                     /site_type="other"
                     /note="ATP-lid"
                     /db_xref="CDD:340403"
     Region          206..349
                     /region_name="MutL_Trans_MLH3"
                     /note="transducer domain, having a ribosomal S5 domain
                     2-like fold, found in proteins similar to yeast and human
                     MLH3 (MutL homologue 3). MLH3 belongs to the DNA mismatch
                     repair (MutL/MLH1/PMS2) family. This transducer domain is
                     homologous to the second domain...; cd03486"
                     /db_xref="CDD:239568"
     Site            325
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:239568"
     Region          1191..1370
                     /region_name="MutL_C"
                     /note="MutL C terminal dimerisation domain; smart00853"
                     /db_xref="CDD:214857"
     CDS             1..1461
                     /gene="MLH3"
                     /coded_by="XM_061156597.1:112..4497"
                     /db_xref="GeneID:133066006"
ORIGIN      
        1 mikclsvevq arlrsglaic slgqcveela lnsidaeakc vavrvnmetf qvqvidngfg
       61 mgsddvdkvg nryftskcns iqdlenprfy gfrgetlasi admasaveis skknksmktf
      121 vklfqngkal kaceadltrp sagttvtvyn lfyqlpvrrk cmdprlefek vrqriealsl
      181 mhpsisfslr ndvsgsmvlq lpktkdicsr fcqiyglgks qklreinfky kefeltgfis
      241 seahynknmq flfvnkrlvl rtklhklidf llrkesiick pksgsasrqm nssprprsnp
      301 elhgiyvinv qcqfcdydvc lepaktlief qnwdtvlvci qegvktflkk eklfvelsse
      361 dikefsednd fslfsvslqk qvssdekcgq vnfqeacnni ldsyemfnlq skavkrkapv
      421 enistqnsrd seairkktnd sflytykssg pahckmaess lqnedsaclq srnleqetag
      481 asesgenkkh qkfclehnsp enpcgtssam fgspfqtlyh fegsgedlei qkvsttvnsm
      541 danilennri qnqperfkda temecqplsf etalsgepsa qreeekrkkp stcgrinvfh
      601 ygqvklcstg fithvvqneq tkstetehlf knyaqpgpvs aketfgnrtl hsvetlnskd
      661 ltstlskefa qlpnkslcrt nrsyglenkh taayknfail gesskkshtg gllpdtssfs
      721 wgrhvsdgsk ktdklicpak piprkklsln sqlgslekfk rqygkvknpl nteveenntl
      781 eittnlspqv epdiplkdkn hldnsdicei ttmkyndsns scqpvnhmff sekfpfskey
      841 dcleqqmlcl testitpqel phfnrkfldv qkspeslask lsrlkgsere tqkmemshfn
      901 elpqldssrk dgdlssgltl dscklfkteh kktesdnipm sdsvtqgnlf skdsetysnn
      961 nttekipgnp lvlpydhaiv iskdsdvpia skqqigspds psrmlmsrve dstanqngtc
     1021 fqsegsiart csgneesntc sldwqqhfdg tlgrmvyink ltglstftap tedvraactk
     1081 dlttlavdvl lengsqyrch pfrsdlvlpf lprareerpv mrqnnratgd dafgpeslqs
     1141 lfsewdnpvf arypevavdv ssgqaeslav kihnilypyr ftkemihsmq vlqqvdnkfi
     1201 aclmstktee ngeaggnllv lvdqhaaher irleqliids yekqqpqgfg rkkllsstvs
     1261 ppleitvtee qrrllgcyhk nledlgleiv fpdtsdslvl igkvplcfve reaselrrgr
     1321 stvtkgivee fireqvellq ttggiqgtlp ltvqkvlasq achgaikfnd glsfeescrl
     1381 iealswcqlp fqcahgrpsm lplanidhle qekqtkpnla klhrmaqawh lfgkgegcdm
     1441 gqslqasmpp celpreqnyc l
//
LOCUS       XP_061012581            1461 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA mismatch repair protein Mlh3 isoform X1 [Dama dama].
ACCESSION   XP_061012581
VERSION     XP_061012581.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156598.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1461
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1461
                     /product="DNA mismatch repair protein Mlh3 isoform X1"
                     /calculated_mol_wt=164097
     Region          9..192
                     /region_name="HATPase_MutL-MLH-PMS-like"
                     /note="Histidine kinase-like ATPase domain of DNA mismatch
                     repair proteins Escherichia coli MutL, human MutL homologs
                     (MLH/ PMS), and related domains; cd16926"
                     /db_xref="CDD:340403"
     Site            order(28,32..33,35..36,54,56,58,60..61,69,74..77,94..97,
                     109,111,143..144,146)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340403"
     Site            order(70,97)
                     /site_type="other"
                     /note="ATP-lid"
                     /db_xref="CDD:340403"
     Region          206..349
                     /region_name="MutL_Trans_MLH3"
                     /note="transducer domain, having a ribosomal S5 domain
                     2-like fold, found in proteins similar to yeast and human
                     MLH3 (MutL homologue 3). MLH3 belongs to the DNA mismatch
                     repair (MutL/MLH1/PMS2) family. This transducer domain is
                     homologous to the second domain...; cd03486"
                     /db_xref="CDD:239568"
     Site            325
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:239568"
     Region          1191..1370
                     /region_name="MutL_C"
                     /note="MutL C terminal dimerisation domain; smart00853"
                     /db_xref="CDD:214857"
     CDS             1..1461
                     /gene="MLH3"
                     /coded_by="XM_061156598.1:130..4515"
                     /db_xref="GeneID:133066006"
ORIGIN      
        1 mikclsvevq arlrsglaic slgqcveela lnsidaeakc vavrvnmetf qvqvidngfg
       61 mgsddvdkvg nryftskcns iqdlenprfy gfrgetlasi admasaveis skknksmktf
      121 vklfqngkal kaceadltrp sagttvtvyn lfyqlpvrrk cmdprlefek vrqriealsl
      181 mhpsisfslr ndvsgsmvlq lpktkdicsr fcqiyglgks qklreinfky kefeltgfis
      241 seahynknmq flfvnkrlvl rtklhklidf llrkesiick pksgsasrqm nssprprsnp
      301 elhgiyvinv qcqfcdydvc lepaktlief qnwdtvlvci qegvktflkk eklfvelsse
      361 dikefsednd fslfsvslqk qvssdekcgq vnfqeacnni ldsyemfnlq skavkrkapv
      421 enistqnsrd seairkktnd sflytykssg pahckmaess lqnedsaclq srnleqetag
      481 asesgenkkh qkfclehnsp enpcgtssam fgspfqtlyh fegsgedlei qkvsttvnsm
      541 danilennri qnqperfkda temecqplsf etalsgepsa qreeekrkkp stcgrinvfh
      601 ygqvklcstg fithvvqneq tkstetehlf knyaqpgpvs aketfgnrtl hsvetlnskd
      661 ltstlskefa qlpnkslcrt nrsyglenkh taayknfail gesskkshtg gllpdtssfs
      721 wgrhvsdgsk ktdklicpak piprkklsln sqlgslekfk rqygkvknpl nteveenntl
      781 eittnlspqv epdiplkdkn hldnsdicei ttmkyndsns scqpvnhmff sekfpfskey
      841 dcleqqmlcl testitpqel phfnrkfldv qkspeslask lsrlkgsere tqkmemshfn
      901 elpqldssrk dgdlssgltl dscklfkteh kktesdnipm sdsvtqgnlf skdsetysnn
      961 nttekipgnp lvlpydhaiv iskdsdvpia skqqigspds psrmlmsrve dstanqngtc
     1021 fqsegsiart csgneesntc sldwqqhfdg tlgrmvyink ltglstftap tedvraactk
     1081 dlttlavdvl lengsqyrch pfrsdlvlpf lprareerpv mrqnnratgd dafgpeslqs
     1141 lfsewdnpvf arypevavdv ssgqaeslav kihnilypyr ftkemihsmq vlqqvdnkfi
     1201 aclmstktee ngeaggnllv lvdqhaaher irleqliids yekqqpqgfg rkkllsstvs
     1261 ppleitvtee qrrllgcyhk nledlgleiv fpdtsdslvl igkvplcfve reaselrrgr
     1321 stvtkgivee fireqvellq ttggiqgtlp ltvqkvlasq achgaikfnd glsfeescrl
     1381 iealswcqlp fqcahgrpsm lplanidhle qekqtkpnla klhrmaqawh lfgkgegcdm
     1441 gqslqasmpp celpreqnyc l
//
LOCUS       XP_061012582            1447 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA mismatch repair protein Mlh3 isoform X2 [Dama dama].
ACCESSION   XP_061012582
VERSION     XP_061012582.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156599.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1447
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1447
                     /product="DNA mismatch repair protein Mlh3 isoform X2"
                     /calculated_mol_wt=162593
     Region          9..192
                     /region_name="HATPase_MutL-MLH-PMS-like"
                     /note="Histidine kinase-like ATPase domain of DNA mismatch
                     repair proteins Escherichia coli MutL, human MutL homologs
                     (MLH/ PMS), and related domains; cd16926"
                     /db_xref="CDD:340403"
     Site            order(28,32..33,35..36,54,56,58,60..61,69,74..77,94..97,
                     109,111,143..144,146)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340403"
     Site            order(70,97)
                     /site_type="other"
                     /note="ATP-lid"
                     /db_xref="CDD:340403"
     Region          206..349
                     /region_name="MutL_Trans_MLH3"
                     /note="transducer domain, having a ribosomal S5 domain
                     2-like fold, found in proteins similar to yeast and human
                     MLH3 (MutL homologue 3). MLH3 belongs to the DNA mismatch
                     repair (MutL/MLH1/PMS2) family. This transducer domain is
                     homologous to the second domain...; cd03486"
                     /db_xref="CDD:239568"
     Site            325
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:239568"
     Region          1191..1356
                     /region_name="MutL_C"
                     /note="MutL C terminal dimerisation domain; smart00853"
                     /db_xref="CDD:214857"
     CDS             1..1447
                     /gene="MLH3"
                     /coded_by="XM_061156599.1:112..4455"
                     /db_xref="GeneID:133066006"
ORIGIN      
        1 mikclsvevq arlrsglaic slgqcveela lnsidaeakc vavrvnmetf qvqvidngfg
       61 mgsddvdkvg nryftskcns iqdlenprfy gfrgetlasi admasaveis skknksmktf
      121 vklfqngkal kaceadltrp sagttvtvyn lfyqlpvrrk cmdprlefek vrqriealsl
      181 mhpsisfslr ndvsgsmvlq lpktkdicsr fcqiyglgks qklreinfky kefeltgfis
      241 seahynknmq flfvnkrlvl rtklhklidf llrkesiick pksgsasrqm nssprprsnp
      301 elhgiyvinv qcqfcdydvc lepaktlief qnwdtvlvci qegvktflkk eklfvelsse
      361 dikefsednd fslfsvslqk qvssdekcgq vnfqeacnni ldsyemfnlq skavkrkapv
      421 enistqnsrd seairkktnd sflytykssg pahckmaess lqnedsaclq srnleqetag
      481 asesgenkkh qkfclehnsp enpcgtssam fgspfqtlyh fegsgedlei qkvsttvnsm
      541 danilennri qnqperfkda temecqplsf etalsgepsa qreeekrkkp stcgrinvfh
      601 ygqvklcstg fithvvqneq tkstetehlf knyaqpgpvs aketfgnrtl hsvetlnskd
      661 ltstlskefa qlpnkslcrt nrsyglenkh taayknfail gesskkshtg gllpdtssfs
      721 wgrhvsdgsk ktdklicpak piprkklsln sqlgslekfk rqygkvknpl nteveenntl
      781 eittnlspqv epdiplkdkn hldnsdicei ttmkyndsns scqpvnhmff sekfpfskey
      841 dcleqqmlcl testitpqel phfnrkfldv qkspeslask lsrlkgsere tqkmemshfn
      901 elpqldssrk dgdlssgltl dscklfkteh kktesdnipm sdsvtqgnlf skdsetysnn
      961 nttekipgnp lvlpydhaiv iskdsdvpia skqqigspds psrmlmsrve dstanqngtc
     1021 fqsegsiart csgneesntc sldwqqhfdg tlgrmvyink ltglstftap tedvraactk
     1081 dlttlavdvl lengsqyrch pfrsdlvlpf lprareerpv mrqnnratgd dafgpeslqs
     1141 lfsewdnpvf arypevavdv ssgqaeslav kihnilypyr ftkemihsmq vlqqvdnkfi
     1201 aclmstktee ngeaggnllv lvdqhaaher irleqliids yekqqpqgfg rkkllsstvl
     1261 frcyhknled lgleivfpdt sdslvligkv plcfvereas elrrgrstvt kgiveefire
     1321 qvellqttgg iqgtlpltvq kvlasqachg aikfndglsf eescrlieal swcqlpfqca
     1381 hgrpsmlpla nidhleqekq tkpnlaklhr maqawhlfgk gegcdmgqsl qasmppcelp
     1441 reqnycl
//
LOCUS       XP_061012583            1428 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA mismatch repair protein Mlh3 isoform X3 [Dama dama].
ACCESSION   XP_061012583
VERSION     XP_061012583.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156600.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1428
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1428
                     /product="DNA mismatch repair protein Mlh3 isoform X3"
                     /calculated_mol_wt=160088
     Region          9..192
                     /region_name="HATPase_MutL-MLH-PMS-like"
                     /note="Histidine kinase-like ATPase domain of DNA mismatch
                     repair proteins Escherichia coli MutL, human MutL homologs
                     (MLH/ PMS), and related domains; cd16926"
                     /db_xref="CDD:340403"
     Site            order(28,32..33,35..36,54,56,58,60..61,69,74..77,94..97,
                     109,111,143..144,146)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340403"
     Site            order(70,97)
                     /site_type="other"
                     /note="ATP-lid"
                     /db_xref="CDD:340403"
     Region          206..349
                     /region_name="MutL_Trans_MLH3"
                     /note="transducer domain, having a ribosomal S5 domain
                     2-like fold, found in proteins similar to yeast and human
                     MLH3 (MutL homologue 3). MLH3 belongs to the DNA mismatch
                     repair (MutL/MLH1/PMS2) family. This transducer domain is
                     homologous to the second domain...; cd03486"
                     /db_xref="CDD:239568"
     Site            325
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:239568"
     Region          1158..1337
                     /region_name="MutL_C"
                     /note="MutL C terminal dimerisation domain; smart00853"
                     /db_xref="CDD:214857"
     CDS             1..1428
                     /gene="MLH3"
                     /coded_by="XM_061156600.1:112..4398"
                     /db_xref="GeneID:133066006"
ORIGIN      
        1 mikclsvevq arlrsglaic slgqcveela lnsidaeakc vavrvnmetf qvqvidngfg
       61 mgsddvdkvg nryftskcns iqdlenprfy gfrgetlasi admasaveis skknksmktf
      121 vklfqngkal kaceadltrp sagttvtvyn lfyqlpvrrk cmdprlefek vrqriealsl
      181 mhpsisfslr ndvsgsmvlq lpktkdicsr fcqiyglgks qklreinfky kefeltgfis
      241 seahynknmq flfvnkrlvl rtklhklidf llrkesiick pksgsasrqm nssprprsnp
      301 elhgiyvinv qcqfcdydvc lepaktlief qnwdtvlvci qegvktflkk eklfvelsse
      361 dikefsednd fslfsvslqk qvssdekcgq vnfqeacnni ldsyemfnlq skavkrkapv
      421 enistqnsrd seairkktnd sflytykssg pahckmaess lqnedsaclq srnleqetag
      481 asesgenkkh qkfclehnsp enpcgtssam fgspfqtlyh fegsgedlei qkvsttvnsm
      541 danilennri qnqperfkda temecqplsf etalsgepsa qreeekrkkp stcgrinvfh
      601 ygqvklcstg fithvvqneq tkstetehlf knyaqpgpvs aketfgnrtl hsvetlnskd
      661 ltstlskefa qlpnkslcrt nrsyglenkh taayknfail gesskkshtg gllpdtssfs
      721 wgrhvsdgsk ktdklicpak piprkklsln sqlgslekfk rqygkvknpl nteveenntl
      781 eittnlspqv epdiplkdkn hldnsdicei ttmkyndsns scqpvnhmff sekfpfskey
      841 dcleqqmlcl testitpqel phfnrkfldv qkspeslask lsrlkgsere tqkmemshfn
      901 elpqldssrk dgdlssgltl dscklfkteh kktesdnipm sdsvtqgnlf skdsetysnn
      961 nttekipgnp lvlpydhaiv iskdsdvpia skqqigspds psrmlmsrve dstanqngtc
     1021 fqsegsiart csgneesntc sldwqqhfdg tlgrmvyink ltglstftap tedvraactk
     1081 dlttlavdvl lenatgddaf gpeslqslfs ewdnpvfary pevavdvssg qaeslavkih
     1141 nilypyrftk emihsmqvlq qvdnkfiacl mstkteenge aggnllvlvd qhaaherirl
     1201 eqliidsyek qqpqgfgrkk llsstvsppl eitvteeqrr llgcyhknle dlgleivfpd
     1261 tsdslvligk vplcfverea selrrgrstv tkgiveefir eqvellqttg giqgtlpltv
     1321 qkvlasqach gaikfndgls feescrliea lswcqlpfqc ahgrpsmlpl anidhleqek
     1381 qtkpnlaklh rmaqawhlfg kgegcdmgqs lqasmppcel preqnycl
//
LOCUS       XP_061012584            1344 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA mismatch repair protein Mlh3 isoform X4 [Dama dama].
ACCESSION   XP_061012584
VERSION     XP_061012584.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156601.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1344
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1344
                     /product="DNA mismatch repair protein Mlh3 isoform X4"
                     /calculated_mol_wt=151338
     Region          9..192
                     /region_name="HATPase_MutL-MLH-PMS-like"
                     /note="Histidine kinase-like ATPase domain of DNA mismatch
                     repair proteins Escherichia coli MutL, human MutL homologs
                     (MLH/ PMS), and related domains; cd16926"
                     /db_xref="CDD:340403"
     Site            order(28,32..33,35..36,54,56,58,60..61,69,74..77,94..97,
                     109,111,143..144,146)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340403"
     Site            order(70,97)
                     /site_type="other"
                     /note="ATP-lid"
                     /db_xref="CDD:340403"
     Region          206..349
                     /region_name="MutL_Trans_MLH3"
                     /note="transducer domain, having a ribosomal S5 domain
                     2-like fold, found in proteins similar to yeast and human
                     MLH3 (MutL homologue 3). MLH3 belongs to the DNA mismatch
                     repair (MutL/MLH1/PMS2) family. This transducer domain is
                     homologous to the second domain...; cd03486"
                     /db_xref="CDD:239568"
     Site            325
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:239568"
     Region          1191..>1318
                     /region_name="MutL_C"
                     /note="MutL C terminal dimerisation domain; smart00853"
                     /db_xref="CDD:214857"
     CDS             1..1344
                     /gene="MLH3"
                     /coded_by="XM_061156601.1:112..4146"
                     /db_xref="GeneID:133066006"
ORIGIN      
        1 mikclsvevq arlrsglaic slgqcveela lnsidaeakc vavrvnmetf qvqvidngfg
       61 mgsddvdkvg nryftskcns iqdlenprfy gfrgetlasi admasaveis skknksmktf
      121 vklfqngkal kaceadltrp sagttvtvyn lfyqlpvrrk cmdprlefek vrqriealsl
      181 mhpsisfslr ndvsgsmvlq lpktkdicsr fcqiyglgks qklreinfky kefeltgfis
      241 seahynknmq flfvnkrlvl rtklhklidf llrkesiick pksgsasrqm nssprprsnp
      301 elhgiyvinv qcqfcdydvc lepaktlief qnwdtvlvci qegvktflkk eklfvelsse
      361 dikefsednd fslfsvslqk qvssdekcgq vnfqeacnni ldsyemfnlq skavkrkapv
      421 enistqnsrd seairkktnd sflytykssg pahckmaess lqnedsaclq srnleqetag
      481 asesgenkkh qkfclehnsp enpcgtssam fgspfqtlyh fegsgedlei qkvsttvnsm
      541 danilennri qnqperfkda temecqplsf etalsgepsa qreeekrkkp stcgrinvfh
      601 ygqvklcstg fithvvqneq tkstetehlf knyaqpgpvs aketfgnrtl hsvetlnskd
      661 ltstlskefa qlpnkslcrt nrsyglenkh taayknfail gesskkshtg gllpdtssfs
      721 wgrhvsdgsk ktdklicpak piprkklsln sqlgslekfk rqygkvknpl nteveenntl
      781 eittnlspqv epdiplkdkn hldnsdicei ttmkyndsns scqpvnhmff sekfpfskey
      841 dcleqqmlcl testitpqel phfnrkfldv qkspeslask lsrlkgsere tqkmemshfn
      901 elpqldssrk dgdlssgltl dscklfkteh kktesdnipm sdsvtqgnlf skdsetysnn
      961 nttekipgnp lvlpydhaiv iskdsdvpia skqqigspds psrmlmsrve dstanqngtc
     1021 fqsegsiart csgneesntc sldwqqhfdg tlgrmvyink ltglstftap tedvraactk
     1081 dlttlavdvl lengsqyrch pfrsdlvlpf lprareerpv mrqnnratgd dafgpeslqs
     1141 lfsewdnpvf arypevavdv ssgqaeslav kihnilypyr ftkemihsmq vlqqvdnkfi
     1201 aclmstktee ngeaggnllv lvdqhaaher irleqliids yekqqpqgfg rkkllsstvs
     1261 ppleitvtee qrrllgcyhk nledlgleiv fpdtsdslvl igkvplcfve reaselrrgr
     1321 stvtkgiver hrtqkaplfh wlfh
//
LOCUS       XP_061012585            1280 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA mismatch repair protein Mlh3 isoform X5 [Dama dama].
ACCESSION   XP_061012585
VERSION     XP_061012585.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156602.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1280
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1280
                     /product="DNA mismatch repair protein Mlh3 isoform X5"
                     /calculated_mol_wt=143965
     Region          9..192
                     /region_name="HATPase_MutL-MLH-PMS-like"
                     /note="Histidine kinase-like ATPase domain of DNA mismatch
                     repair proteins Escherichia coli MutL, human MutL homologs
                     (MLH/ PMS), and related domains; cd16926"
                     /db_xref="CDD:340403"
     Site            order(28,32..33,35..36,54,56,58,60..61,69,74..77,94..97,
                     109,111,143..144,146)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340403"
     Site            order(70,97)
                     /site_type="other"
                     /note="ATP-lid"
                     /db_xref="CDD:340403"
     Region          206..349
                     /region_name="MutL_Trans_MLH3"
                     /note="transducer domain, having a ribosomal S5 domain
                     2-like fold, found in proteins similar to yeast and human
                     MLH3 (MutL homologue 3). MLH3 belongs to the DNA mismatch
                     repair (MutL/MLH1/PMS2) family. This transducer domain is
                     homologous to the second domain...; cd03486"
                     /db_xref="CDD:239568"
     Site            325
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:239568"
     Region          <1100..1277
                     /region_name="mutL"
                     /note="DNA mismatch repair endonuclease MutL; PRK00095"
                     /db_xref="CDD:234630"
     Region          1191..>1275
                     /region_name="MutL_C"
                     /note="MutL C terminal dimerisation domain; smart00853"
                     /db_xref="CDD:214857"
     CDS             1..1280
                     /gene="MLH3"
                     /coded_by="XM_061156602.1:112..3954"
                     /db_xref="GeneID:133066006"
ORIGIN      
        1 mikclsvevq arlrsglaic slgqcveela lnsidaeakc vavrvnmetf qvqvidngfg
       61 mgsddvdkvg nryftskcns iqdlenprfy gfrgetlasi admasaveis skknksmktf
      121 vklfqngkal kaceadltrp sagttvtvyn lfyqlpvrrk cmdprlefek vrqriealsl
      181 mhpsisfslr ndvsgsmvlq lpktkdicsr fcqiyglgks qklreinfky kefeltgfis
      241 seahynknmq flfvnkrlvl rtklhklidf llrkesiick pksgsasrqm nssprprsnp
      301 elhgiyvinv qcqfcdydvc lepaktlief qnwdtvlvci qegvktflkk eklfvelsse
      361 dikefsednd fslfsvslqk qvssdekcgq vnfqeacnni ldsyemfnlq skavkrkapv
      421 enistqnsrd seairkktnd sflytykssg pahckmaess lqnedsaclq srnleqetag
      481 asesgenkkh qkfclehnsp enpcgtssam fgspfqtlyh fegsgedlei qkvsttvnsm
      541 danilennri qnqperfkda temecqplsf etalsgepsa qreeekrkkp stcgrinvfh
      601 ygqvklcstg fithvvqneq tkstetehlf knyaqpgpvs aketfgnrtl hsvetlnskd
      661 ltstlskefa qlpnkslcrt nrsyglenkh taayknfail gesskkshtg gllpdtssfs
      721 wgrhvsdgsk ktdklicpak piprkklsln sqlgslekfk rqygkvknpl nteveenntl
      781 eittnlspqv epdiplkdkn hldnsdicei ttmkyndsns scqpvnhmff sekfpfskey
      841 dcleqqmlcl testitpqel phfnrkfldv qkspeslask lsrlkgsere tqkmemshfn
      901 elpqldssrk dgdlssgltl dscklfkteh kktesdnipm sdsvtqgnlf skdsetysnn
      961 nttekipgnp lvlpydhaiv iskdsdvpia skqqigspds psrmlmsrve dstanqngtc
     1021 fqsegsiart csgneesntc sldwqqhfdg tlgrmvyink ltglstftap tedvraactk
     1081 dlttlavdvl lengsqyrch pfrsdlvlpf lprareerpv mrqnnratgd dafgpeslqs
     1141 lfsewdnpvf arypevavdv ssgqaeslav kihnilypyr ftkemihsmq vlqqvdnkfi
     1201 aclmstktee ngeaggnllv lvdqhaaher irleqliids yekqqpqgfg rkkllsstvs
     1261 ppleitvtee qrrllgkrsq
//
LOCUS       XP_061012586            1271 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA mismatch repair protein Mlh3 isoform X6 [Dama dama].
ACCESSION   XP_061012586
VERSION     XP_061012586.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156603.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1271
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1271
                     /product="DNA mismatch repair protein Mlh3 isoform X6"
                     /calculated_mol_wt=143018
     Region          9..192
                     /region_name="HATPase_MutL-MLH-PMS-like"
                     /note="Histidine kinase-like ATPase domain of DNA mismatch
                     repair proteins Escherichia coli MutL, human MutL homologs
                     (MLH/ PMS), and related domains; cd16926"
                     /db_xref="CDD:340403"
     Site            order(28,32..33,35..36,54,56,58,60..61,69,74..77,94..97,
                     109,111,143..144,146)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340403"
     Site            order(70,97)
                     /site_type="other"
                     /note="ATP-lid"
                     /db_xref="CDD:340403"
     Region          206..349
                     /region_name="MutL_Trans_MLH3"
                     /note="transducer domain, having a ribosomal S5 domain
                     2-like fold, found in proteins similar to yeast and human
                     MLH3 (MutL homologue 3). MLH3 belongs to the DNA mismatch
                     repair (MutL/MLH1/PMS2) family. This transducer domain is
                     homologous to the second domain...; cd03486"
                     /db_xref="CDD:239568"
     Site            325
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:239568"
     Region          <1100..>1246
                     /region_name="mutL"
                     /note="DNA mismatch repair endonuclease MutL; PRK00095"
                     /db_xref="CDD:234630"
     Region          1191..>1255
                     /region_name="MutL_C"
                     /note="MutL C terminal dimerisation domain; smart00853"
                     /db_xref="CDD:214857"
     CDS             1..1271
                     /gene="MLH3"
                     /coded_by="XM_061156603.1:112..3927"
                     /db_xref="GeneID:133066006"
ORIGIN      
        1 mikclsvevq arlrsglaic slgqcveela lnsidaeakc vavrvnmetf qvqvidngfg
       61 mgsddvdkvg nryftskcns iqdlenprfy gfrgetlasi admasaveis skknksmktf
      121 vklfqngkal kaceadltrp sagttvtvyn lfyqlpvrrk cmdprlefek vrqriealsl
      181 mhpsisfslr ndvsgsmvlq lpktkdicsr fcqiyglgks qklreinfky kefeltgfis
      241 seahynknmq flfvnkrlvl rtklhklidf llrkesiick pksgsasrqm nssprprsnp
      301 elhgiyvinv qcqfcdydvc lepaktlief qnwdtvlvci qegvktflkk eklfvelsse
      361 dikefsednd fslfsvslqk qvssdekcgq vnfqeacnni ldsyemfnlq skavkrkapv
      421 enistqnsrd seairkktnd sflytykssg pahckmaess lqnedsaclq srnleqetag
      481 asesgenkkh qkfclehnsp enpcgtssam fgspfqtlyh fegsgedlei qkvsttvnsm
      541 danilennri qnqperfkda temecqplsf etalsgepsa qreeekrkkp stcgrinvfh
      601 ygqvklcstg fithvvqneq tkstetehlf knyaqpgpvs aketfgnrtl hsvetlnskd
      661 ltstlskefa qlpnkslcrt nrsyglenkh taayknfail gesskkshtg gllpdtssfs
      721 wgrhvsdgsk ktdklicpak piprkklsln sqlgslekfk rqygkvknpl nteveenntl
      781 eittnlspqv epdiplkdkn hldnsdicei ttmkyndsns scqpvnhmff sekfpfskey
      841 dcleqqmlcl testitpqel phfnrkfldv qkspeslask lsrlkgsere tqkmemshfn
      901 elpqldssrk dgdlssgltl dscklfkteh kktesdnipm sdsvtqgnlf skdsetysnn
      961 nttekipgnp lvlpydhaiv iskdsdvpia skqqigspds psrmlmsrve dstanqngtc
     1021 fqsegsiart csgneesntc sldwqqhfdg tlgrmvyink ltglstftap tedvraactk
     1081 dlttlavdvl lengsqyrch pfrsdlvlpf lprareerpv mrqnnratgd dafgpeslqs
     1141 lfsewdnpvf arypevavdv ssgqaeslav kihnilypyr ftkemihsmq vlqqvdnkfi
     1201 aclmstktee ngeaggnllv lvdqhaaher irleqliids yekqqpqgfg rkkllsstke
     1261 kpvnfeeedl l
//
LOCUS       XP_061012587            1264 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA mismatch repair protein Mlh3 isoform X7 [Dama dama].
ACCESSION   XP_061012587
VERSION     XP_061012587.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156604.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1264
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1264
                     /product="DNA mismatch repair protein Mlh3 isoform X7"
                     /calculated_mol_wt=142099
     Region          9..192
                     /region_name="HATPase_MutL-MLH-PMS-like"
                     /note="Histidine kinase-like ATPase domain of DNA mismatch
                     repair proteins Escherichia coli MutL, human MutL homologs
                     (MLH/ PMS), and related domains; cd16926"
                     /db_xref="CDD:340403"
     Site            order(28,32..33,35..36,54,56,58,60..61,69,74..77,94..97,
                     109,111,143..144,146)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340403"
     Site            order(70,97)
                     /site_type="other"
                     /note="ATP-lid"
                     /db_xref="CDD:340403"
     Region          206..349
                     /region_name="MutL_Trans_MLH3"
                     /note="transducer domain, having a ribosomal S5 domain
                     2-like fold, found in proteins similar to yeast and human
                     MLH3 (MutL homologue 3). MLH3 belongs to the DNA mismatch
                     repair (MutL/MLH1/PMS2) family. This transducer domain is
                     homologous to the second domain...; cd03486"
                     /db_xref="CDD:239568"
     Site            325
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:239568"
     Region          <1100..>1246
                     /region_name="mutL"
                     /note="DNA mismatch repair endonuclease MutL; PRK00095"
                     /db_xref="CDD:234630"
     Region          1191..>1261
                     /region_name="MutL_C"
                     /note="MutL C terminal dimerisation domain; smart00853"
                     /db_xref="CDD:214857"
     CDS             1..1264
                     /gene="MLH3"
                     /coded_by="XM_061156604.1:112..3906"
                     /db_xref="GeneID:133066006"
ORIGIN      
        1 mikclsvevq arlrsglaic slgqcveela lnsidaeakc vavrvnmetf qvqvidngfg
       61 mgsddvdkvg nryftskcns iqdlenprfy gfrgetlasi admasaveis skknksmktf
      121 vklfqngkal kaceadltrp sagttvtvyn lfyqlpvrrk cmdprlefek vrqriealsl
      181 mhpsisfslr ndvsgsmvlq lpktkdicsr fcqiyglgks qklreinfky kefeltgfis
      241 seahynknmq flfvnkrlvl rtklhklidf llrkesiick pksgsasrqm nssprprsnp
      301 elhgiyvinv qcqfcdydvc lepaktlief qnwdtvlvci qegvktflkk eklfvelsse
      361 dikefsednd fslfsvslqk qvssdekcgq vnfqeacnni ldsyemfnlq skavkrkapv
      421 enistqnsrd seairkktnd sflytykssg pahckmaess lqnedsaclq srnleqetag
      481 asesgenkkh qkfclehnsp enpcgtssam fgspfqtlyh fegsgedlei qkvsttvnsm
      541 danilennri qnqperfkda temecqplsf etalsgepsa qreeekrkkp stcgrinvfh
      601 ygqvklcstg fithvvqneq tkstetehlf knyaqpgpvs aketfgnrtl hsvetlnskd
      661 ltstlskefa qlpnkslcrt nrsyglenkh taayknfail gesskkshtg gllpdtssfs
      721 wgrhvsdgsk ktdklicpak piprkklsln sqlgslekfk rqygkvknpl nteveenntl
      781 eittnlspqv epdiplkdkn hldnsdicei ttmkyndsns scqpvnhmff sekfpfskey
      841 dcleqqmlcl testitpqel phfnrkfldv qkspeslask lsrlkgsere tqkmemshfn
      901 elpqldssrk dgdlssgltl dscklfkteh kktesdnipm sdsvtqgnlf skdsetysnn
      961 nttekipgnp lvlpydhaiv iskdsdvpia skqqigspds psrmlmsrve dstanqngtc
     1021 fqsegsiart csgneesntc sldwqqhfdg tlgrmvyink ltglstftap tedvraactk
     1081 dlttlavdvl lengsqyrch pfrsdlvlpf lprareerpv mrqnnratgd dafgpeslqs
     1141 lfsewdnpvf arypevavdv ssgqaeslav kihnilypyr ftkemihsmq vlqqvdnkfi
     1201 aclmstktee ngeaggnllv lvdqhaaher irleqliids yekqqpqgfg rkkllsstvl
     1261 pqks
//
LOCUS       XP_061012588            1206 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA mismatch repair protein Mlh3 isoform X8 [Dama dama].
ACCESSION   XP_061012588
VERSION     XP_061012588.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156605.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1206
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1206
                     /product="DNA mismatch repair protein Mlh3 isoform X8"
                     /calculated_mol_wt=135119
     Region          9..192
                     /region_name="HATPase_MutL-MLH-PMS-like"
                     /note="Histidine kinase-like ATPase domain of DNA mismatch
                     repair proteins Escherichia coli MutL, human MutL homologs
                     (MLH/ PMS), and related domains; cd16926"
                     /db_xref="CDD:340403"
     Site            order(28,32..33,35..36,54,56,58,60..61,69,74..77,94..97,
                     109,111,143..144,146)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340403"
     Site            order(70,97)
                     /site_type="other"
                     /note="ATP-lid"
                     /db_xref="CDD:340403"
     Region          206..349
                     /region_name="MutL_Trans_MLH3"
                     /note="transducer domain, having a ribosomal S5 domain
                     2-like fold, found in proteins similar to yeast and human
                     MLH3 (MutL homologue 3). MLH3 belongs to the DNA mismatch
                     repair (MutL/MLH1/PMS2) family. This transducer domain is
                     homologous to the second domain...; cd03486"
                     /db_xref="CDD:239568"
     Site            325
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:239568"
     CDS             1..1206
                     /gene="MLH3"
                     /coded_by="XM_061156605.1:112..3732"
                     /db_xref="GeneID:133066006"
ORIGIN      
        1 mikclsvevq arlrsglaic slgqcveela lnsidaeakc vavrvnmetf qvqvidngfg
       61 mgsddvdkvg nryftskcns iqdlenprfy gfrgetlasi admasaveis skknksmktf
      121 vklfqngkal kaceadltrp sagttvtvyn lfyqlpvrrk cmdprlefek vrqriealsl
      181 mhpsisfslr ndvsgsmvlq lpktkdicsr fcqiyglgks qklreinfky kefeltgfis
      241 seahynknmq flfvnkrlvl rtklhklidf llrkesiick pksgsasrqm nssprprsnp
      301 elhgiyvinv qcqfcdydvc lepaktlief qnwdtvlvci qegvktflkk eklfvelsse
      361 dikefsednd fslfsvslqk qvssdekcgq vnfqeacnni ldsyemfnlq skavkrkapv
      421 enistqnsrd seairkktnd sflytykssg pahckmaess lqnedsaclq srnleqetag
      481 asesgenkkh qkfclehnsp enpcgtssam fgspfqtlyh fegsgedlei qkvsttvnsm
      541 danilennri qnqperfkda temecqplsf etalsgepsa qreeekrkkp stcgrinvfh
      601 ygqvklcstg fithvvqneq tkstetehlf knyaqpgpvs aketfgnrtl hsvetlnskd
      661 ltstlskefa qlpnkslcrt nrsyglenkh taayknfail gesskkshtg gllpdtssfs
      721 wgrhvsdgsk ktdklicpak piprkklsln sqlgslekfk rqygkvknpl nteveenntl
      781 eittnlspqv epdiplkdkn hldnsdicei ttmkyndsns scqpvnhmff sekfpfskey
      841 dcleqqmlcl testitpqel phfnrkfldv qkspeslask lsrlkgsere tqkmemshfn
      901 elpqldssrk dgdlssgltl dscklfkteh kktesdnipm sdsvtqgnlf skdsetysnn
      961 nttekipgnp lvlpydhaiv iskdsdvpia skqqigspds psrmlmsrve dstanqngtc
     1021 fqsegsiart csgneesntc sldwqqhfdg tlgrmvyink ltglstftap tedvraactk
     1081 dlttlavdvl lengsqyrch pfrsdlvlpf lprareerpv mrqnnratgd dafgpeslqs
     1141 lfsewdnpvf arypevavdv ssgqaeslav kihnifgacw ssrwkpaslg gparcpranp
     1201 igaadh
//
LOCUS       XP_061012589            1194 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA mismatch repair protein Mlh3 isoform X9 [Dama dama].
ACCESSION   XP_061012589
VERSION     XP_061012589.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156606.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1194
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1194
                     /product="DNA mismatch repair protein Mlh3 isoform X9"
                     /calculated_mol_wt=134266
     Region          9..192
                     /region_name="HATPase_MutL-MLH-PMS-like"
                     /note="Histidine kinase-like ATPase domain of DNA mismatch
                     repair proteins Escherichia coli MutL, human MutL homologs
                     (MLH/ PMS), and related domains; cd16926"
                     /db_xref="CDD:340403"
     Site            order(28,32..33,35..36,54,56,58,60..61,69,74..77,94..97,
                     109,111,143..144,146)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340403"
     Site            order(70,97)
                     /site_type="other"
                     /note="ATP-lid"
                     /db_xref="CDD:340403"
     Region          206..349
                     /region_name="MutL_Trans_MLH3"
                     /note="transducer domain, having a ribosomal S5 domain
                     2-like fold, found in proteins similar to yeast and human
                     MLH3 (MutL homologue 3). MLH3 belongs to the DNA mismatch
                     repair (MutL/MLH1/PMS2) family. This transducer domain is
                     homologous to the second domain...; cd03486"
                     /db_xref="CDD:239568"
     Site            325
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:239568"
     CDS             1..1194
                     /gene="MLH3"
                     /coded_by="XM_061156606.1:112..3696"
                     /db_xref="GeneID:133066006"
ORIGIN      
        1 mikclsvevq arlrsglaic slgqcveela lnsidaeakc vavrvnmetf qvqvidngfg
       61 mgsddvdkvg nryftskcns iqdlenprfy gfrgetlasi admasaveis skknksmktf
      121 vklfqngkal kaceadltrp sagttvtvyn lfyqlpvrrk cmdprlefek vrqriealsl
      181 mhpsisfslr ndvsgsmvlq lpktkdicsr fcqiyglgks qklreinfky kefeltgfis
      241 seahynknmq flfvnkrlvl rtklhklidf llrkesiick pksgsasrqm nssprprsnp
      301 elhgiyvinv qcqfcdydvc lepaktlief qnwdtvlvci qegvktflkk eklfvelsse
      361 dikefsednd fslfsvslqk qvssdekcgq vnfqeacnni ldsyemfnlq skavkrkapv
      421 enistqnsrd seairkktnd sflytykssg pahckmaess lqnedsaclq srnleqetag
      481 asesgenkkh qkfclehnsp enpcgtssam fgspfqtlyh fegsgedlei qkvsttvnsm
      541 danilennri qnqperfkda temecqplsf etalsgepsa qreeekrkkp stcgrinvfh
      601 ygqvklcstg fithvvqneq tkstetehlf knyaqpgpvs aketfgnrtl hsvetlnskd
      661 ltstlskefa qlpnkslcrt nrsyglenkh taayknfail gesskkshtg gllpdtssfs
      721 wgrhvsdgsk ktdklicpak piprkklsln sqlgslekfk rqygkvknpl nteveenntl
      781 eittnlspqv epdiplkdkn hldnsdicei ttmkyndsns scqpvnhmff sekfpfskey
      841 dcleqqmlcl testitpqel phfnrkfldv qkspeslask lsrlkgsere tqkmemshfn
      901 elpqldssrk dgdlssgltl dscklfkteh kktesdnipm sdsvtqgnlf skdsetysnn
      961 nttekipgnp lvlpydhaiv iskdsdvpia skqqigspds psrmlmsrve dstanqngtc
     1021 fqsegsiart csgneesntc sldwqqhfdg tlgrmvyink ltglstftap tedvraactk
     1081 dlttlavdvl lengsqyrch pfrsdlvlpf lprareerpv mrqnnratgd dafgpeslqs
     1141 lfsewdnpvf arypevavdv ssgqaeslav kihnilypyr ftkemihsmq ishc
//
LOCUS       XP_061012590             507 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA mismatch repair protein Mlh3 isoform X10 [Dama dama].
ACCESSION   XP_061012590
VERSION     XP_061012590.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156607.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..507
                     /product="DNA mismatch repair protein Mlh3 isoform X10"
                     /calculated_mol_wt=56321
     Region          9..>66
                     /region_name="HATPase"
                     /note="Histidine kinase-like ATPase domain; cl00075"
                     /db_xref="CDD:469604"
     Region          <226..455
                     /region_name="MutL"
                     /note="DNA mismatch repair ATPase MutL [Replication,
                     recombination and repair]; COG0323"
                     /db_xref="CDD:440092"
     CDS             1..507
                     /gene="MLH3"
                     /coded_by="XM_061156607.1:112..1635"
                     /db_xref="GeneID:133066006"
ORIGIN      
        1 mikclsvevq arlrsglaic slgqcveela lnsidaeakc vavrvnmetf qvqvidngfg
       61 mgsddvdkse gsiartcsgn eesntcsldw qqhfdgtlgr mvyinkltgl stftaptedv
      121 raactkdltt lavdvlleng sqyrchpfrs dlvlpflpra reerpvmrqn nratgddafg
      181 peslqslfse wdnpvfaryp evavdvssgq aeslavkihn ilypyrftke mihsmqvlqq
      241 vdnkfiaclm stkteengea ggnllvlvdq haaherirle qliidsyekq qpqgfgrkkl
      301 lsstvspple itvteeqrrl lgcyhknled lgleivfpdt sdslvligkv plcfvereas
      361 elrrgrstvt kgiveefire qvellqttgg iqgtlpltvq kvlasqachg aikfndglsf
      421 eescrlieal swcqlpfqca hgrpsmlpla nidhleqekq tkpnlaklhr maqawhlfgk
      481 gegcdmgqsl qasmppcelp reqnycl
//
LOCUS       XP_061012591             466 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA mismatch repair protein Mlh3 isoform X11 [Dama dama].
ACCESSION   XP_061012591
VERSION     XP_061012591.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156608.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..466
                     /product="DNA mismatch repair protein Mlh3 isoform X11"
                     /calculated_mol_wt=52359
     Region          196..375
                     /region_name="MutL_C"
                     /note="MutL C terminal dimerisation domain; smart00853"
                     /db_xref="CDD:214857"
     CDS             1..466
                     /gene="MLH3"
                     /coded_by="XM_061156608.1:8..1408"
                     /db_xref="GeneID:133066006"
ORIGIN      
        1 mmflvpwffn slkpktyvpg fvkfmdwseg siartcsgne esntcsldwq qhfdgtlgrm
       61 vyinkltgls tftaptedvr aactkdlttl avdvllengs qyrchpfrsd lvlpflprar
      121 eerpvmrqnn ratgddafgp eslqslfsew dnpvfarype vavdvssgqa eslavkihni
      181 lypyrftkem ihsmqvlqqv dnkfiaclms tkteengeag gnllvlvdqh aaherirleq
      241 liidsyekqq pqgfgrkkll sstvspplei tvteeqrrll gcyhknledl gleivfpdts
      301 dslvligkvp lcfverease lrrgrstvtk giveefireq vellqttggi qgtlpltvqk
      361 vlasqachga ikfndglsfe escrlieals wcqlpfqcah grpsmlplan idhleqekqt
      421 kpnlaklhrm aqawhlfgkg egcdmgqslq asmppcelpr eqnycl
//
LOCUS       XP_061012592             341 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA mismatch repair protein Mlh3 isoform X12 [Dama dama].
ACCESSION   XP_061012592
VERSION     XP_061012592.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156609.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..341
                     /product="DNA mismatch repair protein Mlh3 isoform X12"
                     /calculated_mol_wt=38132
     Region          <60..289
                     /region_name="MutL"
                     /note="DNA mismatch repair ATPase MutL [Replication,
                     recombination and repair]; COG0323"
                     /db_xref="CDD:440092"
     CDS             1..341
                     /gene="MLH3"
                     /coded_by="XM_061156609.1:321..1346"
                     /db_xref="GeneID:133066006"
ORIGIN      
        1 mrqnnratgd dafgpeslqs lfsewdnpvf arypevavdv ssgqaeslav kihnilypyr
       61 ftkemihsmq vlqqvdnkfi aclmstktee ngeaggnllv lvdqhaaher irleqliids
      121 yekqqpqgfg rkkllsstvs ppleitvtee qrrllgcyhk nledlgleiv fpdtsdslvl
      181 igkvplcfve reaselrrgr stvtkgivee fireqvellq ttggiqgtlp ltvqkvlasq
      241 achgaikfnd glsfeescrl iealswcqlp fqcahgrpsm lplanidhle qekqtkpnla
      301 klhrmaqawh lfgkgegcdm gqslqasmpp celpreqnyc l
//
LOCUS       XP_061012594             351 aa            linear   MAM 02-DEC-2023
DEFINITION  translation initiation factor eIF-2B subunit beta [Dama dama].
ACCESSION   XP_061012594
VERSION     XP_061012594.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156611.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..351
                     /product="translation initiation factor eIF-2B subunit
                     beta"
                     /calculated_mol_wt=38850
     Region          29..333
                     /region_name="IF-2B"
                     /note="Initiation factor 2 subunit family; pfam01008"
                     /db_xref="CDD:395798"
     CDS             1..351
                     /gene="EIF2B2"
                     /coded_by="XM_061156611.1:78..1133"
                     /db_xref="GeneID:133066008"
ORIGIN      
        1 mpgaaakgse lseriesfve alkrgggrrs sedmaretlg llrriitdhr wsnagelmel
       61 irregrrmta aqpsettvgn mvrrvlriir eeygrlhgrs desdqqeslh klltsgglse
      121 dfrshyaqlq sniieainel lvelegtten iaaqalehih snevimtigf srtveaflke
      181 aarkrkfhvi vaecapfcqg hemavnlska giettvmtda aifavmsrvn kviigtktil
      241 angalravag thtlalaakh hstplivcap mfklspqfpn eedsfhkfva peevlpfteg
      301 dilekvsvhc pvfdyvppel itlfisnigg napsyiyrlm selyhpddhi l
//
LOCUS       XP_061012595             551 aa            linear   MAM 02-DEC-2023
DEFINITION  ribosomal protein S6 kinase-like 1 isoform X1 [Dama dama].
ACCESSION   XP_061012595
VERSION     XP_061012595.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156612.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..551
                     /product="ribosomal protein S6 kinase-like 1 isoform X1"
                     /calculated_mol_wt=59754
     Region          48..122
                     /region_name="MIT_SNX15"
                     /note="MIT: domain contained within Microtubule
                     Interacting and Trafficking molecules. This MIT domain
                     sub-family is found in sorting nexin 15 and related
                     proteins. The molecular function of the MIT domain is
                     unclear; cd02677"
                     /db_xref="CDD:239140"
     Region          148..541
                     /region_name="STKc_RPK118_like"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     RPK118, and similar proteins; cd05576"
                     /db_xref="CDD:270728"
     Site            order(154..158,162,175,177,201,217..218,220,224,226,414,
                     416,418..419,421,431..432,435,446..451,478,484,487)
                     /site_type="active"
                     /db_xref="CDD:270728"
     Site            order(154..158,162,175,177,201,218..220,224,414,416,
                     418..419,421,431..432)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270728"
     Site            order(158,224,226,414,416,418,435,446..451,478,484,487)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270728"
     Site            431..451
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270728"
     CDS             1..551
                     /gene="RPS6KL1"
                     /coded_by="XM_061156612.1:267..1922"
                     /db_xref="GeneID:133066009"
ORIGIN      
        1 mslvacecpp glgpepepcs rarsqarvyl eqirnrvapg aadmtkhdyl vdaatqirla
       61 lerdvsedye aafnhyqngv dvllrgmhvd pnkerceavk lkitkylrra eeifnchlqr
      121 tlgsgaspde gfsslrlrpi rtlssaleql rgckvvgvie kvqlvqdlat ggtfvvkgls
      181 rchvasrerl tiiphgvpym tqllryfvte dsiflhlehv qggtlwshll sqphpqqsgt
      241 gsgsslektk aplnshlslg tparvppght rlqdgiplkp pwtsqsltpa rgaafvkpqr
      301 eaggeapart stacfwdlpk apgghlhcqa rrgpgrssep tapwglpwvr agagrvlggc
      361 grgrgpshps asrgaspvpg ggawslkeeq vrqwaaetll alealhqqgv lcrdlnprnl
      421 lldqaghirl tyfgqwseve pqccreashn lysapevggi selteacdww sfgsllyell
      481 tgtalsqshp sgiqphtqlq lperlsgpaa slltellqfd paqrlgaggd gvhklkahpf
      541 fssiqwsklv g
//
LOCUS       XP_061012596             551 aa            linear   MAM 02-DEC-2023
DEFINITION  ribosomal protein S6 kinase-like 1 isoform X1 [Dama dama].
ACCESSION   XP_061012596
VERSION     XP_061012596.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156613.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..551
                     /product="ribosomal protein S6 kinase-like 1 isoform X1"
                     /calculated_mol_wt=59754
     Region          48..122
                     /region_name="MIT_SNX15"
                     /note="MIT: domain contained within Microtubule
                     Interacting and Trafficking molecules. This MIT domain
                     sub-family is found in sorting nexin 15 and related
                     proteins. The molecular function of the MIT domain is
                     unclear; cd02677"
                     /db_xref="CDD:239140"
     Region          148..541
                     /region_name="STKc_RPK118_like"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     RPK118, and similar proteins; cd05576"
                     /db_xref="CDD:270728"
     Site            order(154..158,162,175,177,201,217..218,220,224,226,414,
                     416,418..419,421,431..432,435,446..451,478,484,487)
                     /site_type="active"
                     /db_xref="CDD:270728"
     Site            order(154..158,162,175,177,201,218..220,224,414,416,
                     418..419,421,431..432)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270728"
     Site            order(158,224,226,414,416,418,435,446..451,478,484,487)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270728"
     Site            431..451
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270728"
     CDS             1..551
                     /gene="RPS6KL1"
                     /coded_by="XM_061156613.1:146..1801"
                     /db_xref="GeneID:133066009"
ORIGIN      
        1 mslvacecpp glgpepepcs rarsqarvyl eqirnrvapg aadmtkhdyl vdaatqirla
       61 lerdvsedye aafnhyqngv dvllrgmhvd pnkerceavk lkitkylrra eeifnchlqr
      121 tlgsgaspde gfsslrlrpi rtlssaleql rgckvvgvie kvqlvqdlat ggtfvvkgls
      181 rchvasrerl tiiphgvpym tqllryfvte dsiflhlehv qggtlwshll sqphpqqsgt
      241 gsgsslektk aplnshlslg tparvppght rlqdgiplkp pwtsqsltpa rgaafvkpqr
      301 eaggeapart stacfwdlpk apgghlhcqa rrgpgrssep tapwglpwvr agagrvlggc
      361 grgrgpshps asrgaspvpg ggawslkeeq vrqwaaetll alealhqqgv lcrdlnprnl
      421 lldqaghirl tyfgqwseve pqccreashn lysapevggi selteacdww sfgsllyell
      481 tgtalsqshp sgiqphtqlq lperlsgpaa slltellqfd paqrlgaggd gvhklkahpf
      541 fssiqwsklv g
//
LOCUS       XP_061012597             551 aa            linear   MAM 02-DEC-2023
DEFINITION  ribosomal protein S6 kinase-like 1 isoform X1 [Dama dama].
ACCESSION   XP_061012597
VERSION     XP_061012597.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156614.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..551
                     /product="ribosomal protein S6 kinase-like 1 isoform X1"
                     /calculated_mol_wt=59754
     Region          48..122
                     /region_name="MIT_SNX15"
                     /note="MIT: domain contained within Microtubule
                     Interacting and Trafficking molecules. This MIT domain
                     sub-family is found in sorting nexin 15 and related
                     proteins. The molecular function of the MIT domain is
                     unclear; cd02677"
                     /db_xref="CDD:239140"
     Region          148..541
                     /region_name="STKc_RPK118_like"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     RPK118, and similar proteins; cd05576"
                     /db_xref="CDD:270728"
     Site            order(154..158,162,175,177,201,217..218,220,224,226,414,
                     416,418..419,421,431..432,435,446..451,478,484,487)
                     /site_type="active"
                     /db_xref="CDD:270728"
     Site            order(154..158,162,175,177,201,218..220,224,414,416,
                     418..419,421,431..432)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270728"
     Site            order(158,224,226,414,416,418,435,446..451,478,484,487)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270728"
     Site            431..451
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270728"
     CDS             1..551
                     /gene="RPS6KL1"
                     /coded_by="XM_061156614.1:131..1786"
                     /db_xref="GeneID:133066009"
ORIGIN      
        1 mslvacecpp glgpepepcs rarsqarvyl eqirnrvapg aadmtkhdyl vdaatqirla
       61 lerdvsedye aafnhyqngv dvllrgmhvd pnkerceavk lkitkylrra eeifnchlqr
      121 tlgsgaspde gfsslrlrpi rtlssaleql rgckvvgvie kvqlvqdlat ggtfvvkgls
      181 rchvasrerl tiiphgvpym tqllryfvte dsiflhlehv qggtlwshll sqphpqqsgt
      241 gsgsslektk aplnshlslg tparvppght rlqdgiplkp pwtsqsltpa rgaafvkpqr
      301 eaggeapart stacfwdlpk apgghlhcqa rrgpgrssep tapwglpwvr agagrvlggc
      361 grgrgpshps asrgaspvpg ggawslkeeq vrqwaaetll alealhqqgv lcrdlnprnl
      421 lldqaghirl tyfgqwseve pqccreashn lysapevggi selteacdww sfgsllyell
      481 tgtalsqshp sgiqphtqlq lperlsgpaa slltellqfd paqrlgaggd gvhklkahpf
      541 fssiqwsklv g
//
LOCUS       XP_061012598             551 aa            linear   MAM 02-DEC-2023
DEFINITION  ribosomal protein S6 kinase-like 1 isoform X1 [Dama dama].
ACCESSION   XP_061012598
VERSION     XP_061012598.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156615.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..551
                     /product="ribosomal protein S6 kinase-like 1 isoform X1"
                     /calculated_mol_wt=59754
     Region          48..122
                     /region_name="MIT_SNX15"
                     /note="MIT: domain contained within Microtubule
                     Interacting and Trafficking molecules. This MIT domain
                     sub-family is found in sorting nexin 15 and related
                     proteins. The molecular function of the MIT domain is
                     unclear; cd02677"
                     /db_xref="CDD:239140"
     Region          148..541
                     /region_name="STKc_RPK118_like"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     RPK118, and similar proteins; cd05576"
                     /db_xref="CDD:270728"
     Site            order(154..158,162,175,177,201,217..218,220,224,226,414,
                     416,418..419,421,431..432,435,446..451,478,484,487)
                     /site_type="active"
                     /db_xref="CDD:270728"
     Site            order(154..158,162,175,177,201,218..220,224,414,416,
                     418..419,421,431..432)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270728"
     Site            order(158,224,226,414,416,418,435,446..451,478,484,487)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270728"
     Site            431..451
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270728"
     CDS             1..551
                     /gene="RPS6KL1"
                     /coded_by="XM_061156615.1:67..1722"
                     /db_xref="GeneID:133066009"
ORIGIN      
        1 mslvacecpp glgpepepcs rarsqarvyl eqirnrvapg aadmtkhdyl vdaatqirla
       61 lerdvsedye aafnhyqngv dvllrgmhvd pnkerceavk lkitkylrra eeifnchlqr
      121 tlgsgaspde gfsslrlrpi rtlssaleql rgckvvgvie kvqlvqdlat ggtfvvkgls
      181 rchvasrerl tiiphgvpym tqllryfvte dsiflhlehv qggtlwshll sqphpqqsgt
      241 gsgsslektk aplnshlslg tparvppght rlqdgiplkp pwtsqsltpa rgaafvkpqr
      301 eaggeapart stacfwdlpk apgghlhcqa rrgpgrssep tapwglpwvr agagrvlggc
      361 grgrgpshps asrgaspvpg ggawslkeeq vrqwaaetll alealhqqgv lcrdlnprnl
      421 lldqaghirl tyfgqwseve pqccreashn lysapevggi selteacdww sfgsllyell
      481 tgtalsqshp sgiqphtqlq lperlsgpaa slltellqfd paqrlgaggd gvhklkahpf
      541 fssiqwsklv g
//
LOCUS       XP_061012599             535 aa            linear   MAM 02-DEC-2023
DEFINITION  ribosomal protein S6 kinase-like 1 isoform X2 [Dama dama].
ACCESSION   XP_061012599
VERSION     XP_061012599.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156616.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..535
                     /product="ribosomal protein S6 kinase-like 1 isoform X2"
                     /calculated_mol_wt=58097
     Region          48..122
                     /region_name="MIT_SNX15"
                     /note="MIT: domain contained within Microtubule
                     Interacting and Trafficking molecules. This MIT domain
                     sub-family is found in sorting nexin 15 and related
                     proteins. The molecular function of the MIT domain is
                     unclear; cd02677"
                     /db_xref="CDD:239140"
     Region          148..525
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(154..157,160,185,201..204,398,402..403,405,415..416)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..535
                     /gene="RPS6KL1"
                     /coded_by="XM_061156616.1:267..1874"
                     /db_xref="GeneID:133066009"
ORIGIN      
        1 mslvacecpp glgpepepcs rarsqarvyl eqirnrvapg aadmtkhdyl vdaatqirla
       61 lerdvsedye aafnhyqngv dvllrgmhvd pnkerceavk lkitkylrra eeifnchlqr
      121 tlgsgaspde gfsslrlrpi rtlssaleql rgckvvgvie kglsrchvas rerltiiphg
      181 vpymtqllry fvtedsiflh lehvqggtlw shllsqphpq qsgtgsgssl ektkaplnsh
      241 lslgtparvp pghtrlqdgi plkppwtsqs ltpargaafv kpqreaggea partstacfw
      301 dlpkapgghl hcqarrgpgr sseptapwgl pwvragagrv lggcgrgrgp shpsasrgas
      361 pvpgggawsl keeqvrqwaa etllalealh qqgvlcrdln prnllldqag hirltyfgqw
      421 sevepqccre ashnlysape vggiseltea cdwwsfgsll yelltgtals qshpsgiqph
      481 tqlqlperls gpaaslltel lqfdpaqrlg aggdgvhklk ahpffssiqw sklvg
//
LOCUS       XP_061012600             519 aa            linear   MAM 02-DEC-2023
DEFINITION  ribosomal protein S6 kinase-like 1 isoform X3 [Dama dama].
ACCESSION   XP_061012600
VERSION     XP_061012600.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156617.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..519
                     /product="ribosomal protein S6 kinase-like 1 isoform X3"
                     /calculated_mol_wt=56407
     Region          48..122
                     /region_name="MIT_SNX15"
                     /note="MIT: domain contained within Microtubule
                     Interacting and Trafficking molecules. This MIT domain
                     sub-family is found in sorting nexin 15 and related
                     proteins. The molecular function of the MIT domain is
                     unclear; cd02677"
                     /db_xref="CDD:239140"
     Region          148..509
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(154..157,160,162,175,177,201,217..220,414,418..419,
                     421,431..432)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          <230..379
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..519
                     /gene="RPS6KL1"
                     /coded_by="XM_061156617.1:267..1826"
                     /db_xref="GeneID:133066009"
ORIGIN      
        1 mslvacecpp glgpepepcs rarsqarvyl eqirnrvapg aadmtkhdyl vdaatqirla
       61 lerdvsedye aafnhyqngv dvllrgmhvd pnkerceavk lkitkylrra eeifnchlqr
      121 tlgsgaspde gfsslrlrpi rtlssaleql rgckvvgvie kvqlvqdlat ggtfvvkgls
      181 rchvasrerl tiiphgvpym tqllryfvte dsiflhlehv qggtlwshll sqphpqqsgt
      241 gsgsslektk aplnshlslg tparvppght rlqdgiplkp pwtsqsltpa rgaafvkpqr
      301 eaggeapart stacfwdlpk apgghlhcqa rrgpgrssep tapwglpwvr agagrvlggc
      361 grgrgpshps asrgaspvpg ggawslkeeq vrqwaaetll alealhqqgv lcrdlnprnl
      421 lldqaghirl tyfgqwseve pqccreashn lysapevggi selteacdww sfgsllyell
      481 tgtllqfdpa qrlgaggdgv hklkahpffs siqwsklvg
//
LOCUS       XP_061012601            2145 aa            linear   MAM 02-DEC-2023
DEFINITION  YLP motif-containing protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061012601
VERSION     XP_061012601.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156618.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2145
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2145
                     /product="YLP motif-containing protein 1 isoform X1"
                     /calculated_mol_wt=241111
     Region          614..>873
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          937..>1161
                     /region_name="PRK12678"
                     /note="transcription termination factor Rho; Provisional"
                     /db_xref="CDD:237171"
     Region          1085..>1326
                     /region_name="PRK12678"
                     /note="transcription termination factor Rho; Provisional"
                     /db_xref="CDD:237171"
     Region          1835..>1970
                     /region_name="AAA_33"
                     /note="AAA domain; pfam13671"
                     /db_xref="CDD:463952"
     CDS             1..2145
                     /gene="YLPM1"
                     /coded_by="XM_061156618.1:159..6596"
                     /db_xref="GeneID:133066011"
ORIGIN      
        1 mypnwgrygg sshypppppv pppppvalpe aspgpgysss ttaaapsssg fmsfreqhla
       61 qlqqlqqmhq kqmqcvlqph hlpppplppp pgmpgggygd wqpppppmpp ppgpalsyqk
      121 qqqykhqmlh hqrdgppglv pmeldsppes ppvppgsymp psqsylpppq pppsyyppas
      181 sqpylppaqp spsqsppsqs ylaptpsyss ssssqsymsh sqsylpssqa spsrpsqghs
      241 kpqllapppp sappgnkttv qqeplesgak nksaeqqqaa pepdpstmtp qeqqqywyrq
      301 hllslqqrtk vhlpghkkgp ivakdaaepv keevtvpats qvpeppasee pplpptnedv
      361 applppeepq sedpeedarl kqlqaaaahw qqhqqhrvgf qyqgimqkht qlqqilqqyq
      421 qviqhpphiq tmsvdvqmrh yemqqqqfqh lyqewerefq lweeqlhsyp hkdqlqeyek
      481 qwktwqghmk atqtylqdkv salqnvknqy mgnmsmpppf vpysqmpppp ptmpppvlpp
      541 slpppvmppa lptsvpppgm pppvmppslp ssvpppvmpp slssagpppv lpppslssag
      601 pppvlpppsl sstapppvmp laplssatpp pgipppgvpq gmpppltaap vppasssqns
      661 qvpekprpal lptpvsfgsa ppsvyhpplq salgpsdqan skaplgkstl pyssfssepg
      721 lgeasaapsq pltavkdmpg rsggllpdpp rssylegprg prfdgprrfe dlgsrcegpr
      781 pkgprfegnr pdgprpryeg hpaegtkskw gmiprgpasq fyitpntsls prqsgpqwkg
      841 pkptfgqqhq lqpksqaepg nkepladtss nqqknfkmqs atfpiaadvk dakaaqsnen
      901 lsdsqqeppk sevsegpiep sdwdqnsqsm etqmdkaqav tqpvplanka vpsqstfpsk
      961 tggmeggtav atsssltadn dfkslgiglp hsennqdkgl prpdnrdnrl egnqgssssy
     1021 rgpgqsrmed trdkglvsrd rgqaishgpg lvkqedfrdk mmgrredsre kmsrgegsrd
     1081 rglvrpgssr ekvpgglqgs qdrgragsre rgpprragsq ergpprrpgs rermpprrag
     1141 srerglprgp ggrerglgrp efgrdrgpfr pepgdggekm ypyhrdeppr apwnhgeerg
     1201 heefpldgrn apmererldd wdrerywrec ehdyqddtld pynredrfsa psrshdgdrr
     1261 gpwwddwerd qdmdedynre mdrdmdrdvd rigrpmdmyd rnldnewdrd ygrpldeqes
     1321 qfrerdipsl pplpplpplp pmdryrddrw reernrdhgy drdfrdrgel rireypergd
     1381 twrekrdyip drmdwererl sdrwypsdvd rhspmaehmp shhssemmgs danldsdqgl
     1441 ggvmvlsqrq heiilkaaqe lkmlreqkeq lqkmkdygse pqmpdhlppq dsrlqntpsr
     1501 pglypppgsy rppppmgkpp gsivrppapp arssvpvtrp pipipppppp pppppppppv
     1561 ikpqtsaveq erwdedsfyg lwdtndeqgl nsefksepaa mpsapvlppp pvhpsipppg
     1621 pmpmgmppms kpppvqqtvd yghgrdistn kveqipyger itlrpdplpe rstfetehag
     1681 qrdrydrdrd repyfdrqsn vmadhrdfkr drethrdrdr drgvidydrd rfdrerrprd
     1741 drtqsyrdkk dhsssrrggf drpsydrksd rpayegpsmf ggerrsypee rmplpapsis
     1801 hqpppaprve kkpesknvdd ilkppgresr perivvimrg lpgsgkthva klirdkevef
     1861 ggpaprvlsl ddyfitevek eekdpdsgkk vkkkvmeyey eaemeetyrt smfktfkktl
     1921 ddgffpfiil daindrvrhf dqfwsaaktk gfevylaems adnqtcgkrn ihgrklkein
     1981 kmadhweaap rhmmrldirs llqdaaieev emedfdanie eqkdekkdae eeeselgyip
     2041 kskwemdtse akldkldglr tgtkrkrdwe aiasrmedyl qlpddydtra sepgkkrvrw
     2101 adleekkdad rkraigfvvg qtdwekitde sghlaekaln rtkyi
//
LOCUS       XP_061012602            1442 aa            linear   MAM 02-DEC-2023
DEFINITION  YLP motif-containing protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061012602
VERSION     XP_061012602.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156619.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1442
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1442
                     /product="YLP motif-containing protein 1 isoform X2"
                     /calculated_mol_wt=160403
     Region          <613..835
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1132..>1267
                     /region_name="AAA_33"
                     /note="AAA domain; pfam13671"
                     /db_xref="CDD:463952"
     CDS             1..1442
                     /gene="YLPM1"
                     /coded_by="XM_061156619.1:161..4489"
                     /db_xref="GeneID:133066011"
ORIGIN      
        1 mypnwgrygg sshypppppv pppppvalpe aspgpgysss ttaaapsssg fmsfreqhla
       61 qlqqlqqmhq kqmqcvlqph hlpppplppp pgmpgggygd wqpppppmpp ppgpalsyqk
      121 qqqykhqmlh hqrdgppglv pmeldsppes ppvppgsymp psqsylpppq pppsyyppas
      181 sqpylppaqp spsqsppsqs ylaptpsyss ssssqsymsh sqsylpssqa spsrpsqghs
      241 kpqllapppp sappgnkttv qqeplesgak nksaeqqqaa pepdpstmtp qeqqqywyrq
      301 hllslqqrtk vhlpghkkgp ivakdaaepv keevtvpats qvpeppasee pplpptnedv
      361 applppeepq sedpeedarl kqlqaaaahw qqhqqhrvgf qyqgimqkht qlqqilqqyq
      421 qviqhpphiq tmsvdvqmrh yemqqqqfqh lyqewerefq lweeqlhsyp hkdqlqeyek
      481 qwktwqghmk atqtylqdkv salqnvknqy mgnmsmpppf vpysqmpppp ptmpppvlpp
      541 slpppvmppa lptsvpppgm pppvmppslp ssvpppvmpp slssagpppv lpppslssag
      601 pppvlpppsl sstapppvmp laplssatpp pgipppgvpq gmpppltaap vppasssqns
      661 qvpekprpal lptpvsfgsa ppsvyhpplq salgpsdqan skaplgkstl pyssfssepg
      721 lgeasaapsq pltavkdmpg rsggllpdpp rssylegprg preqkeqlqk mkdygsepqm
      781 pdhlppqdsr lqntpsrpgl ypppgsyrpp ppmgkppgsi vrppappars svpvtrppip
      841 ippppppppp ppppppvikp qtsaveqerw dedsfyglwd tndeqglnse fksepaamps
      901 apvlppppvh psipppgpmp mgmppmskpp pvqqtvdygh grdistnkve qipygeritl
      961 rpdplperst fetehagqrd rydrdrdrep yfdrqsnvma dhrdfkrdre thrdrdrdrg
     1021 vidydrdrfd rerrprddrt qsyrdkkdhs ssrrggfdrp sydrksdrpa yegpsmfgge
     1081 rrsypeermp lpapsishqp ppaprvekkp esknvddilk ppgresrper ivvimrglpg
     1141 sgkthvakli rdkevefggp aprvlslddy fitevekeek dpdsgkkvkk kvmeyeyeae
     1201 meetyrtsmf ktfkktlddg ffpfiildai ndrvrhfdqf wsaaktkgfe vylaemsadn
     1261 qtcgkrnihg rklkeinkma dhweaaprhm mrldirsllq daaieeveme dfdanieeqk
     1321 dekkdaeeee selgyipksk wemdtseakl dkldglrtgt krkrdweaia srmedylqlp
     1381 ddydtrasep gkkrvrwadl eekkdadrkr aigfvvgqtd wekitdesgh laekalnrtk
     1441 yi
//
LOCUS       XP_061012603             494 aa            linear   MAM 02-DEC-2023
DEFINITION  prospero homeobox protein 2 isoform X1 [Dama dama].
ACCESSION   XP_061012603
VERSION     XP_061012603.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156620.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..494
                     /product="prospero homeobox protein 2 isoform X1"
                     /calculated_mol_wt=52218
     CDS             1..494
                     /gene="PROX2"
                     /coded_by="XM_061156620.1:288..1772"
                     /db_xref="GeneID:133066013"
ORIGIN      
        1 mdpnssllsg paqyptepcm eggrslspre qsrcspfaws qvpgsslsdp dcfgdehiqa
       61 krarvetivr gmflsptplg pgrapagdgl scpekawgrk rkqslpaqqg plepgpagnr
      121 gggrkggprv rgqlhllrqq vrhlrervlr avepraaaqg patadqrngp gpgpwgvdsd
      181 hhhcpgsvgd lsrlethrvs evqylpegpr flpsearall eslkkeltga isqavdsvlq
      241 kvlvdpsgrl tqlggklqgp vpdgrsepsp peggarkdpl plaalprraq ppagaplgsl
      301 slaksldppr ypisprmipk pyqapptdcp lavapahiqk eqilgqllgh gpggswrggl
      361 pqdpsarsqp ssevalrpwg aarlrplasg qrqcpwpfts tclerlalvp pvkmepgglq
      421 aitdtlpfsa ahisfsgnrg shlsqpretg tpdaegrlgd kqllgsgncs vlpeergvfl
      481 mfvlglpspv ahsc
//
LOCUS       XP_061012604             594 aa            linear   MAM 02-DEC-2023
DEFINITION  prospero homeobox protein 2 isoform X2 [Dama dama].
ACCESSION   XP_061012604
VERSION     XP_061012604.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156621.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..594
                     /product="prospero homeobox protein 2 isoform X2"
                     /calculated_mol_wt=64773
     Region          436..589
                     /region_name="HPD"
                     /note="Homeo-prospero domain; pfam05044"
                     /db_xref="CDD:461534"
     CDS             1..594
                     /gene="PROX2"
                     /coded_by="XM_061156621.1:533..2317"
                     /db_xref="GeneID:133066013"
ORIGIN      
        1 mdpnssllsg paqyptepcm eggrslspre qsrcspfaws qvpgsslsdp dcfgdehiqa
       61 krarvetivr gmflsptplg pgrapagdgl scpekawgrk rkqslpaqqg plepgpagnr
      121 gggrkggprv rgqlhllrqq vrhlrervlr avepraaaqg patadqrngp gpgpwgvdsd
      181 hhhcpgsvgd lsrlethrvs evqylpegpr flpsearall eslkkeltga isqavdsvlq
      241 kvlvdpsgrl tqlggklqgp vpdgrsepsp peggarkdpl plaalprraq ppagaplgsl
      301 slaksldppr ypisprmipk pyqapptdcp lavapahiqk eqilgqllgh gpggswrggl
      361 pqdpsarsqp ssevalrpwg aarlrplasg qrqcpwpfts tclerlalvp pvkmepgglq
      421 aitdtlpfsa ahiqeglnpg hlkkaklmff ftrypssnll kayfpdvqfn rcitsqmikw
      481 fsnfrefyyi qmekfarqai sdgvtnpkml vvlrdselfr alnmhynkgn dfevpdcfle
      541 iasltlqeff ravstgkdad pswkkpiyki iskldsdipe ifksssypqe lfrn
//
LOCUS       XP_061012605             455 aa            linear   MAM 02-DEC-2023
DEFINITION  dihydrolipoyllysine-residue succinyltransferase component of
            2-oxoglutarate dehydrogenase complex, mitochondrial [Dama dama].
ACCESSION   XP_061012605
VERSION     XP_061012605.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156622.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..455
                     /product="dihydrolipoyllysine-residue succinyltransferase
                     component of 2-oxoglutarate dehydrogenase complex,
                     mitochondrial"
                     /calculated_mol_wt=48683
     Region          72..455
                     /region_name="sucB"
                     /note="2-oxoglutarate dehydrogenase complex
                     dihydrolipoamide succinyltransferase (E2 component);
                     TIGR01347"
                     /db_xref="CDD:273565"
     CDS             1..455
                     /gene="DLST"
                     /coded_by="XM_061156622.1:63..1430"
                     /db_xref="GeneID:133066014"
ORIGIN      
        1 mlslsrcasr afsrslsafq kgncplgrrs lpgislcqgp gypdsrktvi sssnilsvrf
       61 frttavckdd vitvktpafa esvtegdvrw ekavgdtvae devvceietd ktsvqvpspa
      121 ngvieallvp dggkveggtp lftlrktgaa pakakpaaap aaaapkaepa vsavppppaa
      181 sippqmppmp spsqpltskp vsavkptaap praeagagig lrsehrekmn rmrqriaqrl
      241 keaqntcaml ttfneidmsn iqemrarhkd aflkkhnlkl gfmsafvkas afalqeqpvv
      301 naviddatke vvyrdyidis vavatprglv vpvirnvetm nyadiertis elgekarkne
      361 laiedmdggt ftisnggvfg slfgtpiinp pqsailgmha ivdrpvvvgg kvevrpmmyv
      421 altydhrlid greavtflrk ikaavedprv llldl
//
LOCUS       XP_061012606             198 aa            linear   MAM 02-DEC-2023
DEFINITION  rRNA-processing protein FCF1 homolog [Dama dama].
ACCESSION   XP_061012606
VERSION     XP_061012606.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156623.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..198
                     /product="rRNA-processing protein FCF1 homolog"
                     /calculated_mol_wt=23239
     Region          57..187
                     /region_name="PIN_Fcf1-like"
                     /note="VapC-like PIN domain of rRNA-processing protein,
                     Fcf1 (Utp24, YDR339C), and other eukaryotic homologs;
                     cd09864"
                     /db_xref="CDD:350212"
     Site            order(57,64..65,83,118..125)
                     /site_type="other"
                     /note="UTP 24 binding site [polypeptide binding]"
                     /db_xref="CDD:350212"
     CDS             1..198
                     /gene="FCF1"
                     /coded_by="XM_061156623.1:82..678"
                     /db_xref="GeneID:133066016"
ORIGIN      
        1 mgkqkktrky atmkrmlslr dqrlkekdrl kpkkkekkdp salkerevpq hpsclffqyn
       61 tqlgppyhil vdtnfinfsi kakldlvqsm mdclyakcip citdcvmaei eklgqkyrva
      121 lriakdprfe rlpcthkgty addclvqrvt qhkcyivatv drdlkrrirk ipgvpimyis
      181 nhryniermp ddygaprf
//
LOCUS       XP_061012607             823 aa            linear   MAM 02-DEC-2023
DEFINITION  apoptosis-resistant E3 ubiquitin protein ligase 1 isoform X1 [Dama
            dama].
ACCESSION   XP_061012607
VERSION     XP_061012607.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156624.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..823
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..823
                     /product="apoptosis-resistant E3 ubiquitin protein ligase
                     1 isoform X1"
                     /calculated_mol_wt=93974
     Region          56..154
                     /region_name="Filamin"
                     /note="Filamin/ABP280 repeat; pfam00630"
                     /db_xref="CDD:395505"
     Site            order(468,498,509,577,754,784..785,788..792,812,820)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Region          486..820
                     /region_name="HECTc"
                     /note="Domain Homologous to E6-AP Carboxyl Terminus with;
                     smart00119"
                     /db_xref="CDD:214523"
     Site            order(605,608..609,611..612,615,621,623,627..628,630,636,
                     642,659,663)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..823
                     /gene="AREL1"
                     /coded_by="XM_061156624.1:541..3012"
                     /db_xref="GeneID:133066017"
ORIGIN      
        1 mfyviggitv svvaffftik flfelaarvv sflqnedrer rgdrtiydyv rgnyldprsc
       61 kvswdwkdpy evghsmafrv hlfykngqpf pahrpvglrv hishvelave ipvtqevlqe
      121 pssnvvkvaf tvrkagryei svklgglnva yspyykifqp gmvvpsktki vchfstlvlt
      181 cgqphtlqiv prdeydnptn nstslrnehn yslsihelgp peeestgvsf eksvtsnrqt
      241 cqvflrltlh srgcfhacis yqnqpinnge fdiivlsene rnivernvst sgvsiyfeay
      301 lynaanctst pwhlppmhts saqrrpstal eeededssse chtpekvkkp kkvycyvspk
      361 qfsvkefylk iipwrlytfr vcpgtkfsyl gpdpvhkllt lvvddgiqpp velsckerni
      421 laatfirslh kniggsetfq dkvnffhrel rqvhmkrphs kvtlkvsrha llesslkatr
      481 nfsisdwskn fevvfqdeea ldwggprrew felickalfd ttnqlftrfs dtnqalvhpn
      541 pnrpthlrlk myefagrlvg kclyesslgg aykqlvrarf trsflaqiig lrmhykyfet
      601 ddpefykskv cfilnndmse melvfaeeky nksgqldkvv elmtggaqtp vtnankifyl
      661 nllaqyrlas qvkeevehfl kglnelvpen llaifdenel ellmcgtgdi svsdfkahav
      721 viggswhfre kvmrwfwtvv ssltqeelar llqfttgssq lppggfaalc psfqiiaapt
      781 hstlptahtc fnqlclptyd syeevhrmlq laisegcegf gmf
//
LOCUS       XP_061012608             823 aa            linear   MAM 02-DEC-2023
DEFINITION  apoptosis-resistant E3 ubiquitin protein ligase 1 isoform X1 [Dama
            dama].
ACCESSION   XP_061012608
VERSION     XP_061012608.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156625.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..823
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..823
                     /product="apoptosis-resistant E3 ubiquitin protein ligase
                     1 isoform X1"
                     /calculated_mol_wt=93974
     Region          56..154
                     /region_name="Filamin"
                     /note="Filamin/ABP280 repeat; pfam00630"
                     /db_xref="CDD:395505"
     Site            order(468,498,509,577,754,784..785,788..792,812,820)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Region          486..820
                     /region_name="HECTc"
                     /note="Domain Homologous to E6-AP Carboxyl Terminus with;
                     smart00119"
                     /db_xref="CDD:214523"
     Site            order(605,608..609,611..612,615,621,623,627..628,630,636,
                     642,659,663)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..823
                     /gene="AREL1"
                     /coded_by="XM_061156625.1:641..3112"
                     /db_xref="GeneID:133066017"
ORIGIN      
        1 mfyviggitv svvaffftik flfelaarvv sflqnedrer rgdrtiydyv rgnyldprsc
       61 kvswdwkdpy evghsmafrv hlfykngqpf pahrpvglrv hishvelave ipvtqevlqe
      121 pssnvvkvaf tvrkagryei svklgglnva yspyykifqp gmvvpsktki vchfstlvlt
      181 cgqphtlqiv prdeydnptn nstslrnehn yslsihelgp peeestgvsf eksvtsnrqt
      241 cqvflrltlh srgcfhacis yqnqpinnge fdiivlsene rnivernvst sgvsiyfeay
      301 lynaanctst pwhlppmhts saqrrpstal eeededssse chtpekvkkp kkvycyvspk
      361 qfsvkefylk iipwrlytfr vcpgtkfsyl gpdpvhkllt lvvddgiqpp velsckerni
      421 laatfirslh kniggsetfq dkvnffhrel rqvhmkrphs kvtlkvsrha llesslkatr
      481 nfsisdwskn fevvfqdeea ldwggprrew felickalfd ttnqlftrfs dtnqalvhpn
      541 pnrpthlrlk myefagrlvg kclyesslgg aykqlvrarf trsflaqiig lrmhykyfet
      601 ddpefykskv cfilnndmse melvfaeeky nksgqldkvv elmtggaqtp vtnankifyl
      661 nllaqyrlas qvkeevehfl kglnelvpen llaifdenel ellmcgtgdi svsdfkahav
      721 viggswhfre kvmrwfwtvv ssltqeelar llqfttgssq lppggfaalc psfqiiaapt
      781 hstlptahtc fnqlclptyd syeevhrmlq laisegcegf gmf
//
LOCUS       XP_061012609             823 aa            linear   MAM 02-DEC-2023
DEFINITION  apoptosis-resistant E3 ubiquitin protein ligase 1 isoform X1 [Dama
            dama].
ACCESSION   XP_061012609
VERSION     XP_061012609.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156626.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..823
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..823
                     /product="apoptosis-resistant E3 ubiquitin protein ligase
                     1 isoform X1"
                     /calculated_mol_wt=93974
     Region          56..154
                     /region_name="Filamin"
                     /note="Filamin/ABP280 repeat; pfam00630"
                     /db_xref="CDD:395505"
     Site            order(468,498,509,577,754,784..785,788..792,812,820)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Region          486..820
                     /region_name="HECTc"
                     /note="Domain Homologous to E6-AP Carboxyl Terminus with;
                     smart00119"
                     /db_xref="CDD:214523"
     Site            order(605,608..609,611..612,615,621,623,627..628,630,636,
                     642,659,663)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..823
                     /gene="AREL1"
                     /coded_by="XM_061156626.1:742..3213"
                     /db_xref="GeneID:133066017"
ORIGIN      
        1 mfyviggitv svvaffftik flfelaarvv sflqnedrer rgdrtiydyv rgnyldprsc
       61 kvswdwkdpy evghsmafrv hlfykngqpf pahrpvglrv hishvelave ipvtqevlqe
      121 pssnvvkvaf tvrkagryei svklgglnva yspyykifqp gmvvpsktki vchfstlvlt
      181 cgqphtlqiv prdeydnptn nstslrnehn yslsihelgp peeestgvsf eksvtsnrqt
      241 cqvflrltlh srgcfhacis yqnqpinnge fdiivlsene rnivernvst sgvsiyfeay
      301 lynaanctst pwhlppmhts saqrrpstal eeededssse chtpekvkkp kkvycyvspk
      361 qfsvkefylk iipwrlytfr vcpgtkfsyl gpdpvhkllt lvvddgiqpp velsckerni
      421 laatfirslh kniggsetfq dkvnffhrel rqvhmkrphs kvtlkvsrha llesslkatr
      481 nfsisdwskn fevvfqdeea ldwggprrew felickalfd ttnqlftrfs dtnqalvhpn
      541 pnrpthlrlk myefagrlvg kclyesslgg aykqlvrarf trsflaqiig lrmhykyfet
      601 ddpefykskv cfilnndmse melvfaeeky nksgqldkvv elmtggaqtp vtnankifyl
      661 nllaqyrlas qvkeevehfl kglnelvpen llaifdenel ellmcgtgdi svsdfkahav
      721 viggswhfre kvmrwfwtvv ssltqeelar llqfttgssq lppggfaalc psfqiiaapt
      781 hstlptahtc fnqlclptyd syeevhrmlq laisegcegf gmf
//
LOCUS       XP_061012610             823 aa            linear   MAM 02-DEC-2023
DEFINITION  apoptosis-resistant E3 ubiquitin protein ligase 1 isoform X1 [Dama
            dama].
ACCESSION   XP_061012610
VERSION     XP_061012610.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156627.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..823
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..823
                     /product="apoptosis-resistant E3 ubiquitin protein ligase
                     1 isoform X1"
                     /calculated_mol_wt=93974
     Region          56..154
                     /region_name="Filamin"
                     /note="Filamin/ABP280 repeat; pfam00630"
                     /db_xref="CDD:395505"
     Site            order(468,498,509,577,754,784..785,788..792,812,820)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Region          486..820
                     /region_name="HECTc"
                     /note="Domain Homologous to E6-AP Carboxyl Terminus with;
                     smart00119"
                     /db_xref="CDD:214523"
     Site            order(605,608..609,611..612,615,621,623,627..628,630,636,
                     642,659,663)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..823
                     /gene="AREL1"
                     /coded_by="XM_061156627.1:478..2949"
                     /db_xref="GeneID:133066017"
ORIGIN      
        1 mfyviggitv svvaffftik flfelaarvv sflqnedrer rgdrtiydyv rgnyldprsc
       61 kvswdwkdpy evghsmafrv hlfykngqpf pahrpvglrv hishvelave ipvtqevlqe
      121 pssnvvkvaf tvrkagryei svklgglnva yspyykifqp gmvvpsktki vchfstlvlt
      181 cgqphtlqiv prdeydnptn nstslrnehn yslsihelgp peeestgvsf eksvtsnrqt
      241 cqvflrltlh srgcfhacis yqnqpinnge fdiivlsene rnivernvst sgvsiyfeay
      301 lynaanctst pwhlppmhts saqrrpstal eeededssse chtpekvkkp kkvycyvspk
      361 qfsvkefylk iipwrlytfr vcpgtkfsyl gpdpvhkllt lvvddgiqpp velsckerni
      421 laatfirslh kniggsetfq dkvnffhrel rqvhmkrphs kvtlkvsrha llesslkatr
      481 nfsisdwskn fevvfqdeea ldwggprrew felickalfd ttnqlftrfs dtnqalvhpn
      541 pnrpthlrlk myefagrlvg kclyesslgg aykqlvrarf trsflaqiig lrmhykyfet
      601 ddpefykskv cfilnndmse melvfaeeky nksgqldkvv elmtggaqtp vtnankifyl
      661 nllaqyrlas qvkeevehfl kglnelvpen llaifdenel ellmcgtgdi svsdfkahav
      721 viggswhfre kvmrwfwtvv ssltqeelar llqfttgssq lppggfaalc psfqiiaapt
      781 hstlptahtc fnqlclptyd syeevhrmlq laisegcegf gmf
//
LOCUS       XP_061012611             813 aa            linear   MAM 02-DEC-2023
DEFINITION  apoptosis-resistant E3 ubiquitin protein ligase 1 isoform X2 [Dama
            dama].
ACCESSION   XP_061012611
VERSION     XP_061012611.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156628.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..813
                     /product="apoptosis-resistant E3 ubiquitin protein ligase
                     1 isoform X2"
                     /calculated_mol_wt=92851
     Region          56..144
                     /region_name="Filamin"
                     /note="Filamin/ABP280 repeat; pfam00630"
                     /db_xref="CDD:395505"
     Site            order(458,488,499,567,744,774..775,778..782,802,810)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Region          476..810
                     /region_name="HECTc"
                     /note="Domain Homologous to E6-AP Carboxyl Terminus with;
                     smart00119"
                     /db_xref="CDD:214523"
     Site            order(595,598..599,601..602,605,611,613,617..618,620,626,
                     632,649,653)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..813
                     /gene="AREL1"
                     /coded_by="XM_061156628.1:541..2982"
                     /db_xref="GeneID:133066017"
ORIGIN      
        1 mfyviggitv svvaffftik flfelaarvv sflqnedrer rgdrtiydyv rgnyldprsc
       61 kvswdwkdpy elfykngqpf pahrpvglrv hishvelave ipvtqevlqe pssnvvkvaf
      121 tvrkagryei svklgglnva yspyykifqp gmvvpsktki vchfstlvlt cgqphtlqiv
      181 prdeydnptn nstslrnehn yslsihelgp peeestgvsf eksvtsnrqt cqvflrltlh
      241 srgcfhacis yqnqpinnge fdiivlsene rnivernvst sgvsiyfeay lynaanctst
      301 pwhlppmhts saqrrpstal eeededssse chtpekvkkp kkvycyvspk qfsvkefylk
      361 iipwrlytfr vcpgtkfsyl gpdpvhkllt lvvddgiqpp velsckerni laatfirslh
      421 kniggsetfq dkvnffhrel rqvhmkrphs kvtlkvsrha llesslkatr nfsisdwskn
      481 fevvfqdeea ldwggprrew felickalfd ttnqlftrfs dtnqalvhpn pnrpthlrlk
      541 myefagrlvg kclyesslgg aykqlvrarf trsflaqiig lrmhykyfet ddpefykskv
      601 cfilnndmse melvfaeeky nksgqldkvv elmtggaqtp vtnankifyl nllaqyrlas
      661 qvkeevehfl kglnelvpen llaifdenel ellmcgtgdi svsdfkahav viggswhfre
      721 kvmrwfwtvv ssltqeelar llqfttgssq lppggfaalc psfqiiaapt hstlptahtc
      781 fnqlclptyd syeevhrmlq laisegcegf gmf
//
LOCUS       XP_061012612             668 aa            linear   MAM 02-DEC-2023
DEFINITION  apoptosis-resistant E3 ubiquitin protein ligase 1 isoform X3 [Dama
            dama].
ACCESSION   XP_061012612
VERSION     XP_061012612.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156629.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..668
                     /product="apoptosis-resistant E3 ubiquitin protein ligase
                     1 isoform X3"
                     /calculated_mol_wt=76164
     Site            order(313,343,354,422,599,629..630,633..637,657,665)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Region          331..665
                     /region_name="HECTc"
                     /note="Domain Homologous to E6-AP Carboxyl Terminus with;
                     smart00119"
                     /db_xref="CDD:214523"
     Site            order(450,453..454,456..457,460,466,468,472..473,475,481,
                     487,504,508)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..668
                     /gene="AREL1"
                     /coded_by="XM_061156629.1:541..2547"
                     /db_xref="GeneID:133066017"
ORIGIN      
        1 mfyvigmvvp sktkivchfs tlvltcgqph tlqivprdey dnptnnstsl rnehnyslsi
       61 helgppeees tgvsfeksvt snrqtcqvfl rltlhsrgcf hacisyqnqp inngefdiiv
      121 lsenernive rnvstsgvsi yfeaylynaa nctstpwhlp pmhtssaqrr pstaleeede
      181 dsssechtpe kvkkpkkvyc yvspkqfsvk efylkiipwr lytfrvcpgt kfsylgpdpv
      241 hklltlvvdd giqppvelsc kernilaatf irslhknigg setfqdkvnf fhrelrqvhm
      301 krphskvtlk vsrhalless lkatrnfsis dwsknfevvf qdeealdwgg prrewfelic
      361 kalfdttnql ftrfsdtnqa lvhpnpnrpt hlrlkmyefa grlvgkclye sslggaykql
      421 vrarftrsfl aqiiglrmhy kyfetddpef ykskvcfiln ndmsemelvf aeekynksgq
      481 ldkvvelmtg gaqtpvtnan kifylnllaq yrlasqvkee vehflkglne lvpenllaif
      541 denelellmc gtgdisvsdf kahavviggs whfrekvmrw fwtvvssltq eelarllqft
      601 tgssqlppgg faalcpsfqi iaapthstlp tahtcfnqlc lptydsyeev hrmlqlaise
      661 gcegfgmf
//
LOCUS       XP_061012614             668 aa            linear   MAM 02-DEC-2023
DEFINITION  apoptosis-resistant E3 ubiquitin protein ligase 1 isoform X3 [Dama
            dama].
ACCESSION   XP_061012614
VERSION     XP_061012614.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156631.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..668
                     /product="apoptosis-resistant E3 ubiquitin protein ligase
                     1 isoform X3"
                     /calculated_mol_wt=76164
     Site            order(313,343,354,422,599,629..630,633..637,657,665)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Region          331..665
                     /region_name="HECTc"
                     /note="Domain Homologous to E6-AP Carboxyl Terminus with;
                     smart00119"
                     /db_xref="CDD:214523"
     Site            order(450,453..454,456..457,460,466,468,472..473,475,481,
                     487,504,508)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..668
                     /gene="AREL1"
                     /coded_by="XM_061156631.1:478..2484"
                     /db_xref="GeneID:133066017"
ORIGIN      
        1 mfyvigmvvp sktkivchfs tlvltcgqph tlqivprdey dnptnnstsl rnehnyslsi
       61 helgppeees tgvsfeksvt snrqtcqvfl rltlhsrgcf hacisyqnqp inngefdiiv
      121 lsenernive rnvstsgvsi yfeaylynaa nctstpwhlp pmhtssaqrr pstaleeede
      181 dsssechtpe kvkkpkkvyc yvspkqfsvk efylkiipwr lytfrvcpgt kfsylgpdpv
      241 hklltlvvdd giqppvelsc kernilaatf irslhknigg setfqdkvnf fhrelrqvhm
      301 krphskvtlk vsrhalless lkatrnfsis dwsknfevvf qdeealdwgg prrewfelic
      361 kalfdttnql ftrfsdtnqa lvhpnpnrpt hlrlkmyefa grlvgkclye sslggaykql
      421 vrarftrsfl aqiiglrmhy kyfetddpef ykskvcfiln ndmsemelvf aeekynksgq
      481 ldkvvelmtg gaqtpvtnan kifylnllaq yrlasqvkee vehflkglne lvpenllaif
      541 denelellmc gtgdisvsdf kahavviggs whfrekvmrw fwtvvssltq eelarllqft
      601 tgssqlppgg faalcpsfqi iaapthstlp tahtcfnqlc lptydsyeev hrmlqlaise
      661 gcegfgmf
//
LOCUS       XP_061012615             662 aa            linear   MAM 02-DEC-2023
DEFINITION  apoptosis-resistant E3 ubiquitin protein ligase 1 isoform X4 [Dama
            dama].
ACCESSION   XP_061012615
VERSION     XP_061012615.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156632.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..662
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..662
                     /product="apoptosis-resistant E3 ubiquitin protein ligase
                     1 isoform X4"
                     /calculated_mol_wt=75453
     Site            order(307,337,348,416,593,623..624,627..631,651,659)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Region          325..659
                     /region_name="HECTc"
                     /note="Domain Homologous to E6-AP Carboxyl Terminus with;
                     smart00119"
                     /db_xref="CDD:214523"
     Site            order(444,447..448,450..451,454,460,462,466..467,469,475,
                     481,498,502)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..662
                     /gene="AREL1"
                     /coded_by="XM_061156632.1:797..2785"
                     /db_xref="GeneID:133066017"
ORIGIN      
        1 mvvpsktkiv chfstlvltc gqphtlqivp rdeydnptnn stslrnehny slsihelgpp
       61 eeestgvsfe ksvtsnrqtc qvflrltlhs rgcfhacisy qnqpinngef diivlsener
      121 nivernvsts gvsiyfeayl ynaanctstp whlppmhtss aqrrpstale eededsssec
      181 htpekvkkpk kvycyvspkq fsvkefylki ipwrlytfrv cpgtkfsylg pdpvhklltl
      241 vvddgiqppv elsckernil aatfirslhk niggsetfqd kvnffhrelr qvhmkrphsk
      301 vtlkvsrhal lesslkatrn fsisdwsknf evvfqdeeal dwggprrewf elickalfdt
      361 tnqlftrfsd tnqalvhpnp nrpthlrlkm yefagrlvgk clyesslgga ykqlvrarft
      421 rsflaqiigl rmhykyfetd dpefykskvc filnndmsem elvfaeekyn ksgqldkvve
      481 lmtggaqtpv tnankifyln llaqyrlasq vkeevehflk glnelvpenl laifdenele
      541 llmcgtgdis vsdfkahavv iggswhfrek vmrwfwtvvs sltqeelarl lqfttgssql
      601 ppggfaalcp sfqiiaapth stlptahtcf nqlclptyds yeevhrmlql aisegcegfg
      661 mf
//
LOCUS       XP_061012616             662 aa            linear   MAM 02-DEC-2023
DEFINITION  apoptosis-resistant E3 ubiquitin protein ligase 1 isoform X4 [Dama
            dama].
ACCESSION   XP_061012616
VERSION     XP_061012616.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156633.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..662
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..662
                     /product="apoptosis-resistant E3 ubiquitin protein ligase
                     1 isoform X4"
                     /calculated_mol_wt=75453
     Site            order(307,337,348,416,593,623..624,627..631,651,659)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Region          325..659
                     /region_name="HECTc"
                     /note="Domain Homologous to E6-AP Carboxyl Terminus with;
                     smart00119"
                     /db_xref="CDD:214523"
     Site            order(444,447..448,450..451,454,460,462,466..467,469,475,
                     481,498,502)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..662
                     /gene="AREL1"
                     /coded_by="XM_061156633.1:734..2722"
                     /db_xref="GeneID:133066017"
ORIGIN      
        1 mvvpsktkiv chfstlvltc gqphtlqivp rdeydnptnn stslrnehny slsihelgpp
       61 eeestgvsfe ksvtsnrqtc qvflrltlhs rgcfhacisy qnqpinngef diivlsener
      121 nivernvsts gvsiyfeayl ynaanctstp whlppmhtss aqrrpstale eededsssec
      181 htpekvkkpk kvycyvspkq fsvkefylki ipwrlytfrv cpgtkfsylg pdpvhklltl
      241 vvddgiqppv elsckernil aatfirslhk niggsetfqd kvnffhrelr qvhmkrphsk
      301 vtlkvsrhal lesslkatrn fsisdwsknf evvfqdeeal dwggprrewf elickalfdt
      361 tnqlftrfsd tnqalvhpnp nrpthlrlkm yefagrlvgk clyesslgga ykqlvrarft
      421 rsflaqiigl rmhykyfetd dpefykskvc filnndmsem elvfaeekyn ksgqldkvve
      481 lmtggaqtpv tnankifyln llaqyrlasq vkeevehflk glnelvpenl laifdenele
      541 llmcgtgdis vsdfkahavv iggswhfrek vmrwfwtvvs sltqeelarl lqfttgssql
      601 ppggfaalcp sfqiiaapth stlptahtcf nqlclptyds yeevhrmlql aisegcegfg
      661 mf
//
LOCUS       XP_061012617             662 aa            linear   MAM 02-DEC-2023
DEFINITION  apoptosis-resistant E3 ubiquitin protein ligase 1 isoform X4 [Dama
            dama].
ACCESSION   XP_061012617
VERSION     XP_061012617.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156634.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..662
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..662
                     /product="apoptosis-resistant E3 ubiquitin protein ligase
                     1 isoform X4"
                     /calculated_mol_wt=75453
     Site            order(307,337,348,416,593,623..624,627..631,651,659)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Region          325..659
                     /region_name="HECTc"
                     /note="Domain Homologous to E6-AP Carboxyl Terminus with;
                     smart00119"
                     /db_xref="CDD:214523"
     Site            order(444,447..448,450..451,454,460,462,466..467,469,475,
                     481,498,502)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..662
                     /gene="AREL1"
                     /coded_by="XM_061156634.1:498..2486"
                     /db_xref="GeneID:133066017"
ORIGIN      
        1 mvvpsktkiv chfstlvltc gqphtlqivp rdeydnptnn stslrnehny slsihelgpp
       61 eeestgvsfe ksvtsnrqtc qvflrltlhs rgcfhacisy qnqpinngef diivlsener
      121 nivernvsts gvsiyfeayl ynaanctstp whlppmhtss aqrrpstale eededsssec
      181 htpekvkkpk kvycyvspkq fsvkefylki ipwrlytfrv cpgtkfsylg pdpvhklltl
      241 vvddgiqppv elsckernil aatfirslhk niggsetfqd kvnffhrelr qvhmkrphsk
      301 vtlkvsrhal lesslkatrn fsisdwsknf evvfqdeeal dwggprrewf elickalfdt
      361 tnqlftrfsd tnqalvhpnp nrpthlrlkm yefagrlvgk clyesslgga ykqlvrarft
      421 rsflaqiigl rmhykyfetd dpefykskvc filnndmsem elvfaeekyn ksgqldkvve
      481 lmtggaqtpv tnankifyln llaqyrlasq vkeevehflk glnelvpenl laifdenele
      541 llmcgtgdis vsdfkahavv iggswhfrek vmrwfwtvvs sltqeelarl lqfttgssql
      601 ppggfaalcp sfqiiaapth stlptahtcf nqlclptyds yeevhrmlql aisegcegfg
      661 mf
//
LOCUS       XP_061012618            1842 aa            linear   MAM 02-DEC-2023
DEFINITION  latent-transforming growth factor beta-binding protein 2 isoform X1
            [Dama dama].
ACCESSION   XP_061012618
VERSION     XP_061012618.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156635.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1842
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1842
                     /product="latent-transforming growth factor beta-binding
                     protein 2 isoform X1"
                     /calculated_mol_wt=198113
     Region          <44..318
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          549..>583
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          610..>639
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(610,613,627)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          669..712
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          837..871
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          879..>909
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(879,882,896)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          922..>952
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(922,925,939)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          962..996
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(962,965,979)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1002..1033
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1002,1005,1019)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1043..1073
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF domain; pfam07645"
                     /db_xref="CDD:429571"
     Region          1085..1115
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF domain; pfam07645"
                     /db_xref="CDD:429571"
     Site            order(1085,1088,1102)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1127..1167
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1127,1130,1145)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1168..1209
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1168,1171,1186)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1210..1241
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1210,1213,1227)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1295..1328
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1295,1298,1313)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1415..1455
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1477..1510
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1477,1480,1496)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1586..1628
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1795..>1829
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1795,1798,1816)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..1842
                     /gene="LTBP2"
                     /coded_by="XM_061156635.1:16..5544"
                     /db_xref="GeneID:133066020"
ORIGIN      
        1 mrppttarcp grslrnpwrs fwpltlalfv gmgqaqrdpv gryepagrda srlrrpggsp
       61 vaatakvysl freqeapvrg sppaelvqps wgsprrstea earrppraqq prrvqppaqt
      121 wrsrpsgqqq sapraraapa lprlgtvqrp raargrltgr nvcggqccpg wttanstnhc
      181 ikpvcqppcq nrgscsrpql cvcrsgfrga rceevipeee fdpqnsrpap rrsaegppnl
      241 rrssvarest tararppapq pqrartlsgl sqthssqqha glsqtarlyp apaasgqlts
      301 nalpmgpgpe rrdgapqaay ldhlssswgl nltekikkik ivftptickq tcargrcans
      361 cergdtttly sqsghghdpk sgfriyfcqi pclnggrcig rdecwcpans tgkfchlpap
      421 rldqepperg phhraplegp lkqstftlpl snqlasvnps lvkvhirhpp easvqihqva
      481 rvrgeaeeap eensvetrps prlpagpghg hwdsnripar sgepprlppp vvhrtpallg
      541 rcylstlngq canplpelta qedccgsvga fwgvtscapc pprpaspvie ngqlecpqgy
      601 krlnlthced vnecltlglc edsecvntrg sylctcrpgl lldpsrsrcv sdkavsmqqg
      661 lcyrllgpgt calplaqrit kqicccsrvg kawgslcekc plpgteafre icpaghgyty
      721 sssdirlsmr kaeeeelarp srehgpkrng tlprpaerqp lraatstwve aetvpdkgds
      781 qasqvttsit qlstsvlgaa pggptpsmpe qgipeateea qvtaptdalv tpvpsgidrc
      841 aagatnicgp gtcvnlpdgy rcicspgyrl hpsqayctdd neclrdpckg rgrcvnrvgs
      901 yscfcypgyk laasgatqec qdideceqpg vcsrgrctnt egsyhcecdq gyimvrkghc
      961 qdinecrhpa tcpdgrcvns pgsytclpce egyrgqggsc vdvnecltpg vcahgtcinl
     1021 egsfrcsceq gyevtpdekg cqdvdecair ascptglcln tegsftcsac esgywvnedg
     1081 tacedldeca fpgvcpsgvc tntagsfscr dceagyqpsa lghscedvde cedpqssclg
     1141 geckntagsy qclcppgfql angtvcedvd ecvgeeycap rgeclnshgs ffclcadgfv
     1201 sadggtscqd vdecavtdrc lggqcvntdg sfncvcetgf qpspesgecv didecedlge
     1261 pmcgawrcen spgsfrcvlg cqpgfhmapt gdcidideca ndtvcgshgf cdntdgsfrc
     1321 lcdqgfetsp sgwdcvdvne celmlavcga alcenvegsf lclcasdlee ydaqegrcrp
     1381 rgaggpsvpe arpgahppgp vrmecysgqk dqtpcssllg rnttqaeccc tqgtgwgdac
     1441 dlcpdedsve fseicpsgkg yipvegawmf gqttytdade cvmfgpglcr ngrclntvpg
     1501 yiclcnpgyh ynaarrkced hdecqdmace ngecvntegs fhcfcspplt ldlsqqrcvn
     1561 stsgvedlpd hdihmdicwk rvtnyvcshp lhgrrttyte cccqdgeaws qqcalcpprs
     1621 sevyaqlcnv arieaereag ihfrpgyeyg pgpddlhysl ygpdgvpfyn ylgpedaipe
     1681 plfpstagrp gdriplpepp lqpselqphy vashpglccc kngeevgsea vslpsspsah
     1741 hcqqehqagf eglqaeecgi lngcengrcv rvregytcdc fegfqldtah macvdvnecd
     1801 dlngpaalcv hghcentegs yrchclpgyv aeagpphcta ke
//
LOCUS       XP_061012619            1864 aa            linear   MAM 02-DEC-2023
DEFINITION  latent-transforming growth factor beta-binding protein 2 isoform X2
            [Dama dama].
ACCESSION   XP_061012619
VERSION     XP_061012619.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156636.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1864
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1864
                     /product="latent-transforming growth factor beta-binding
                     protein 2 isoform X2"
                     /calculated_mol_wt=200485
     Region          <44..318
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          549..>583
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          610..>639
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(610,613,627)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          669..712
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          <740..858
                     /region_name="PHA03378"
                     /note="EBNA-3B; Provisional"
                     /db_xref="CDD:223065"
     Region          859..893
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          901..>931
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(901,904,918)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          944..>974
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(944,947,961)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          984..1018
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(984,987,1001)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1024..1055
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1024,1027,1041)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1065..1095
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF domain; pfam07645"
                     /db_xref="CDD:429571"
     Region          1107..1137
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF domain; pfam07645"
                     /db_xref="CDD:429571"
     Site            order(1107,1110,1124)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1149..1189
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1149,1152,1167)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1190..1231
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1190,1193,1208)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1232..1263
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1232,1235,1249)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1317..1350
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1317,1320,1335)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1437..1477
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1499..1532
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1499,1502,1518)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1608..1650
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1817..>1851
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1817,1820,1838)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..1864
                     /gene="LTBP2"
                     /coded_by="XM_061156636.1:148..5742"
                     /db_xref="GeneID:133066020"
ORIGIN      
        1 mrppttarcp grslrnpwrs fwpltlalfv gmgqaqrdpv gryepagrda srlrrpggsp
       61 vaatakvysl freqeapvrg sppaelvqps wgsprrstea earrppraqq prrvqppaqt
      121 wrsrpsgqqq sapraraapa lprlgtvqrp raargrltgr nvcggqccpg wttanstnhc
      181 ikpvcqppcq nrgscsrpql cvcrsgfrga rceevipeee fdpqnsrpap rrsaegppnl
      241 rrssvarest tararppapq pqrartlsgl sqthssqqha glsqtarlyp apaasgqlts
      301 nalpmgpgpe rrdgapqaay ldhlssswgl nltekikkik ivftptickq tcargrcans
      361 cergdtttly sqsghghdpk sgfriyfcqi pclnggrcig rdecwcpans tgkfchlpap
      421 rldqepperg phhraplegp lkqstftlpl snqlasvnps lvkvhirhpp easvqihqva
      481 rvrgeaeeap eensvetrps prlpagpghg hwdsnripar sgepprlppp vvhrtpallg
      541 rcylstlngq canplpelta qedccgsvga fwgvtscapc pprpaspvie ngqlecpqgy
      601 krlnlthced vnecltlglc edsecvntrg sylctcrpgl lldpsrsrcv sdkavsmqqg
      661 lcyrllgpgt calplaqrit kqicccsrvg kawgslcekc plpgteafre icpaghgyty
      721 sssdirlsmr kaeeeelarp srehgpkrng tlprpaerqp lraatstwve aetvpdkgds
      781 qasqptrllh pwdspgsers spgsvqvtts itqlstsvlg aapggptpsm peqgipeate
      841 eaqvtaptda lvtpvpsgid rcaagatnic gpgtcvnlpd gyrcicspgy rlhpsqayct
      901 ddneclrdpc kgrgrcvnrv gsyscfcypg yklaasgatq ecqdideceq pgvcsrgrct
      961 ntegsyhcec dqgyimvrkg hcqdinecrh patcpdgrcv nspgsytclp ceegyrgqgg
     1021 scvdvneclt pgvcahgtci nlegsfrcsc eqgyevtpde kgcqdvdeca irascptglc
     1081 lntegsftcs acesgywvne dgtacedlde cafpgvcpsg vctntagsfs crdceagyqp
     1141 salghscedv decedpqssc lggeckntag syqclcppgf qlangtvced vdecvgeeyc
     1201 aprgeclnsh gsffclcadg fvsadggtsc qdvdecavtd rclggqcvnt dgsfncvcet
     1261 gfqpspesge cvdidecedl gepmcgawrc enspgsfrcv lgcqpgfhma ptgdcidide
     1321 candtvcgsh gfcdntdgsf rclcdqgfet spsgwdcvdv necelmlavc gaalcenveg
     1381 sflclcasdl eeydaqegrc rprgaggpsv pearpgahpp gpvrmecysg qkdqtpcssl
     1441 lgrnttqaec cctqgtgwgd acdlcpdeds vefseicpsg kgyipvegaw mfgqttytda
     1501 decvmfgpgl crngrclntv pgyiclcnpg yhynaarrkc edhdecqdma cengecvnte
     1561 gsfhcfcspp ltldlsqqrc vnstsgvedl pdhdihmdic wkrvtnyvcs hplhgrrtty
     1621 tecccqdgea wsqqcalcpp rssevyaqlc nvarieaere agihfrpgye ygpgpddlhy
     1681 slygpdgvpf ynylgpedai peplfpstag rpgdriplpe pplqpselqp hyvashpglc
     1741 cckngeevgs eavslpssps ahhcqqehqa gfeglqaeec gilngcengr cvrvregytc
     1801 dcfegfqldt ahmacvdvne cddlngpaal cvhghcente gsyrchclpg yvaeagpphc
     1861 take
//
LOCUS       XP_061012620            1835 aa            linear   MAM 02-DEC-2023
DEFINITION  latent-transforming growth factor beta-binding protein 2 isoform X3
            [Dama dama].
ACCESSION   XP_061012620
VERSION     XP_061012620.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156637.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1835
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1835
                     /product="latent-transforming growth factor beta-binding
                     protein 2 isoform X3"
                     /calculated_mol_wt=197545
     Region          <44..318
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          549..>583
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          610..>639
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(610,613,627)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          669..712
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          <740..858
                     /region_name="PHA03378"
                     /note="EBNA-3B; Provisional"
                     /db_xref="CDD:223065"
     Region          859..893
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          901..>931
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(901,904,918)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          944..>974
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(944,947,961)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          984..1018
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(984,987,1001)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1024..1055
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1024,1027,1041)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1065..1095
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF domain; pfam07645"
                     /db_xref="CDD:429571"
     Region          1107..1137
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF domain; pfam07645"
                     /db_xref="CDD:429571"
     Site            order(1107,1110,1124)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1149..1189
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1149,1152,1167)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1190..1231
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1190,1193,1208)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1232..1263
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1232,1235,1249)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1317..1350
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1317,1320,1335)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1437..1477
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1499..1532
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1499,1502,1518)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1608..1650
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1788..>1822
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1788,1791,1809)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..1835
                     /gene="LTBP2"
                     /coded_by="XM_061156637.1:148..5655"
                     /db_xref="GeneID:133066020"
ORIGIN      
        1 mrppttarcp grslrnpwrs fwpltlalfv gmgqaqrdpv gryepagrda srlrrpggsp
       61 vaatakvysl freqeapvrg sppaelvqps wgsprrstea earrppraqq prrvqppaqt
      121 wrsrpsgqqq sapraraapa lprlgtvqrp raargrltgr nvcggqccpg wttanstnhc
      181 ikpvcqppcq nrgscsrpql cvcrsgfrga rceevipeee fdpqnsrpap rrsaegppnl
      241 rrssvarest tararppapq pqrartlsgl sqthssqqha glsqtarlyp apaasgqlts
      301 nalpmgpgpe rrdgapqaay ldhlssswgl nltekikkik ivftptickq tcargrcans
      361 cergdtttly sqsghghdpk sgfriyfcqi pclnggrcig rdecwcpans tgkfchlpap
      421 rldqepperg phhraplegp lkqstftlpl snqlasvnps lvkvhirhpp easvqihqva
      481 rvrgeaeeap eensvetrps prlpagpghg hwdsnripar sgepprlppp vvhrtpallg
      541 rcylstlngq canplpelta qedccgsvga fwgvtscapc pprpaspvie ngqlecpqgy
      601 krlnlthced vnecltlglc edsecvntrg sylctcrpgl lldpsrsrcv sdkavsmqqg
      661 lcyrllgpgt calplaqrit kqicccsrvg kawgslcekc plpgteafre icpaghgyty
      721 sssdirlsmr kaeeeelarp srehgpkrng tlprpaerqp lraatstwve aetvpdkgds
      781 qasqptrllh pwdspgsers spgsvqvtts itqlstsvlg aapggptpsm peqgipeate
      841 eaqvtaptda lvtpvpsgid rcaagatnic gpgtcvnlpd gyrcicspgy rlhpsqayct
      901 ddneclrdpc kgrgrcvnrv gsyscfcypg yklaasgatq ecqdideceq pgvcsrgrct
      961 ntegsyhcec dqgyimvrkg hcqdinecrh patcpdgrcv nspgsytclp ceegyrgqgg
     1021 scvdvneclt pgvcahgtci nlegsfrcsc eqgyevtpde kgcqdvdeca irascptglc
     1081 lntegsftcs acesgywvne dgtacedlde cafpgvcpsg vctntagsfs crdceagyqp
     1141 salghscedv decedpqssc lggeckntag syqclcppgf qlangtvced vdecvgeeyc
     1201 aprgeclnsh gsffclcadg fvsadggtsc qdvdecavtd rclggqcvnt dgsfncvcet
     1261 gfqpspesge cvdidecedl gepmcgawrc enspgsfrcv lgcqpgfhma ptgdcidide
     1321 candtvcgsh gfcdntdgsf rclcdqgfet spsgwdcvdv necelmlavc gaalcenveg
     1381 sflclcasdl eeydaqegrc rprgaggpsv pearpgahpp gpvrmecysg qkdqtpcssl
     1441 lgrnttqaec cctqgtgwgd acdlcpdeds vefseicpsg kgyipvegaw mfgqttytda
     1501 decvmfgpgl crngrclntv pgyiclcnpg yhynaarrkc edhdecqdma cengecvnte
     1561 gsfhcfcspp ltldlsqqrc vnstsgvedl pdhdihmdic wkrvtnyvcs hplhgrrtty
     1621 tecccqdgea wsqqcalcpp rssevyaqlc nvarieaere agihfrpgye ygpgpddlhy
     1681 slygpdgvpf ynylgpedai peplfpstag rpgdriplpe pplqpselqp hyvashpehq
     1741 agfeglqaee cgilngceng rcvrvregyt cdcfegfqld tahmacvdvn ecddlngpaa
     1801 lcvhghcent egsyrchclp gyvaeagpph ctake
//
LOCUS       XP_061012621            1822 aa            linear   MAM 02-DEC-2023
DEFINITION  latent-transforming growth factor beta-binding protein 2 isoform X4
            [Dama dama].
ACCESSION   XP_061012621
VERSION     XP_061012621.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156638.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1822
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1822
                     /product="latent-transforming growth factor beta-binding
                     protein 2 isoform X4"
                     /calculated_mol_wt=196108
     Region          <44..318
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          549..>583
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          610..>639
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(610,613,627)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          669..712
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          817..851
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          859..>889
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(859,862,876)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          902..>932
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(902,905,919)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          942..976
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(942,945,959)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          982..1013
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(982,985,999)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1023..1053
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF domain; pfam07645"
                     /db_xref="CDD:429571"
     Region          1065..1095
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF domain; pfam07645"
                     /db_xref="CDD:429571"
     Site            order(1065,1068,1082)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1107..1147
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1107,1110,1125)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1148..1189
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1148,1151,1166)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1190..1221
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1190,1193,1207)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1275..1308
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1275,1278,1293)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1395..1435
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1457..1490
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1457,1460,1476)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1566..1608
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1775..>1809
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1775,1778,1796)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..1822
                     /gene="LTBP2"
                     /coded_by="XM_061156638.1:148..5616"
                     /db_xref="GeneID:133066020"
ORIGIN      
        1 mrppttarcp grslrnpwrs fwpltlalfv gmgqaqrdpv gryepagrda srlrrpggsp
       61 vaatakvysl freqeapvrg sppaelvqps wgsprrstea earrppraqq prrvqppaqt
      121 wrsrpsgqqq sapraraapa lprlgtvqrp raargrltgr nvcggqccpg wttanstnhc
      181 ikpvcqppcq nrgscsrpql cvcrsgfrga rceevipeee fdpqnsrpap rrsaegppnl
      241 rrssvarest tararppapq pqrartlsgl sqthssqqha glsqtarlyp apaasgqlts
      301 nalpmgpgpe rrdgapqaay ldhlssswgl nltekikkik ivftptickq tcargrcans
      361 cergdtttly sqsghghdpk sgfriyfcqi pclnggrcig rdecwcpans tgkfchlpap
      421 rldqepperg phhraplegp lkqstftlpl snqlasvnps lvkvhirhpp easvqihqva
      481 rvrgeaeeap eensvetrps prlpagpghg hwdsnripar sgepprlppp vvhrtpallg
      541 rcylstlngq canplpelta qedccgsvga fwgvtscapc pprpaspvie ngqlecpqgy
      601 krlnlthced vnecltlglc edsecvntrg sylctcrpgl lldpsrsrcv sdkavsmqqg
      661 lcyrllgpgt calplaqrit kqicccsrvg kawgslcekc plpgteafre icpaghgyty
      721 sssdirlsmr kaeeeelarp srehgpkrng tlprpaerqp lraatstwve aetvpdkgaa
      781 pggptpsmpe qgipeateea qvtaptdalv tpvpsgidrc aagatnicgp gtcvnlpdgy
      841 rcicspgyrl hpsqayctdd neclrdpckg rgrcvnrvgs yscfcypgyk laasgatqec
      901 qdideceqpg vcsrgrctnt egsyhcecdq gyimvrkghc qdinecrhpa tcpdgrcvns
      961 pgsytclpce egyrgqggsc vdvnecltpg vcahgtcinl egsfrcsceq gyevtpdekg
     1021 cqdvdecair ascptglcln tegsftcsac esgywvnedg tacedldeca fpgvcpsgvc
     1081 tntagsfscr dceagyqpsa lghscedvde cedpqssclg geckntagsy qclcppgfql
     1141 angtvcedvd ecvgeeycap rgeclnshgs ffclcadgfv sadggtscqd vdecavtdrc
     1201 lggqcvntdg sfncvcetgf qpspesgecv didecedlge pmcgawrcen spgsfrcvlg
     1261 cqpgfhmapt gdcidideca ndtvcgshgf cdntdgsfrc lcdqgfetsp sgwdcvdvne
     1321 celmlavcga alcenvegsf lclcasdlee ydaqegrcrp rgaggpsvpe arpgahppgp
     1381 vrmecysgqk dqtpcssllg rnttqaeccc tqgtgwgdac dlcpdedsve fseicpsgkg
     1441 yipvegawmf gqttytdade cvmfgpglcr ngrclntvpg yiclcnpgyh ynaarrkced
     1501 hdecqdmace ngecvntegs fhcfcspplt ldlsqqrcvn stsgvedlpd hdihmdicwk
     1561 rvtnyvcshp lhgrrttyte cccqdgeaws qqcalcpprs sevyaqlcnv arieaereag
     1621 ihfrpgyeyg pgpddlhysl ygpdgvpfyn ylgpedaipe plfpstagrp gdriplpepp
     1681 lqpselqphy vashpglccc kngeevgsea vslpsspsah hcqqehqagf eglqaeecgi
     1741 lngcengrcv rvregytcdc fegfqldtah macvdvnecd dlngpaalcv hghcentegs
     1801 yrchclpgyv aeagpphcta ke
//
LOCUS       XP_061012622             152 aa            linear   MAM 02-DEC-2023
DEFINITION  iron-sulfur cluster assembly 2 homolog, mitochondrial [Dama dama].
ACCESSION   XP_061012622
VERSION     XP_061012622.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156639.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..152
                     /product="iron-sulfur cluster assembly 2 homolog,
                     mitochondrial"
                     /calculated_mol_wt=16229
     Region          12..151
                     /region_name="Fe-S_biosyn"
                     /note="Iron-sulphur cluster biosynthesis; cl00400"
                     /db_xref="CDD:444888"
     CDS             1..152
                     /gene="ISCA2"
                     /coded_by="XM_061156639.1:18..476"
                     /db_xref="GeneID:133066022"
ORIGIN      
        1 maavrgltav alrvvtpwpr srllsasrgp ralrevssss peagegqihl tdscvqrlle
       61 itegseflrl evegggcsgf qykfsldtvi npddrvfekg garvvvdsds lafvkgahvd
      121 fsqelirssf qvlnnpqaqq gcscgssfsv kl
//
LOCUS       XP_061012623             149 aa            linear   MAM 02-DEC-2023
DEFINITION  NPC intracellular cholesterol transporter 2 [Dama dama].
ACCESSION   XP_061012623
VERSION     XP_061012623.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156640.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..149
                     /product="NPC intracellular cholesterol transporter 2"
                     /calculated_mol_wt=16210
     Region          24..145
                     /region_name="Npc2_like"
                     /note="Niemann-Pick type C2 (Npc2) is a lysosomal protein
                     in which a mutation in the gene causes a rare form of
                     Niemann-Pick type C disease, an autosomal recessive lipid
                     storage disorder characterized by accumulation of
                     low-density lipoprotein-derived...; cd00916"
                     /db_xref="CDD:238458"
     Site            order(85,115,119)
                     /site_type="other"
                     /note="putative cholesterol/lipid binding site [chemical
                     binding]"
                     /db_xref="CDD:238458"
     CDS             1..149
                     /gene="NPC2"
                     /coded_by="XM_061156640.1:181..630"
                     /db_xref="GeneID:133066024"
ORIGIN      
        1 mrflavaflf lalsasalae pvkfkdcgsg vgvikevnvs pcptqpcklh kgqsysvnvt
       61 ftsntqsqgs kavvhgivmg ipvpfpipes dgcksgitcp ieknktynyv nklpvkseyp
      121 sikvvvqwel tddkdqrffc weipievea
//
LOCUS       XP_061012624             677 aa            linear   MAM 02-DEC-2023
DEFINITION  lysosomal cobalamin transporter ABCD4 isoform X1 [Dama dama].
ACCESSION   XP_061012624
VERSION     XP_061012624.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156641.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..677
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..677
                     /product="lysosomal cobalamin transporter ABCD4 isoform
                     X1"
                     /calculated_mol_wt=75674
     Region          19..584
                     /region_name="YddA"
                     /note="ABC-type uncharacterized transport system, permease
                     and ATPase components [General function prediction only];
                     COG4178"
                     /db_xref="CDD:443337"
     CDS             1..677
                     /gene="ABCD4"
                     /coded_by="XM_061156641.1:120..2153"
                     /db_xref="GeneID:133066025"
ORIGIN      
        1 mairgpaprp ggrprlglqf lqrflqiqkv lfpswssqna lmfltllcva lleqlviyrv
       61 glipsqyfgv lgnkdlngfk tltflsvvli vlnsmlksfd qftcnllyvs wrkdltehlh
      121 rlyfrgrvyy tlnvlrddvd npdqrisqdv erfcrqlssm asklivspft lvyytyqcfr
      181 stgwlgpvsi fgyfilgtvv nrvlmgpiva klvqqekleg dfrfkhmqir vnaepaaffr
      241 aghvehmrtd rrlqrllqtq relmskelwl yiginmfdyl gsilsyvvia ipifsgvygd
      301 lspaelsslv sknafvcmyl iscfsqlidl sttlsdvagy thrigelqet lldmtpksqd
      361 gefldesqwd lardpggpat epadtaflle rvcicapssh kplikdlslk isegqsllit
      421 gntgtgktsl lrvlgglwas argsvqmvad fgphgvlflp qkpfftdgtl reqviyplke
      481 iypdsgstdd erimrflela glsslvarte gldqqvdwnw ydvlspgemq rlsfarlfyl
      541 qpkyavldea tsalteeves elyrigqqlg mtfisvghrr slekdaglgl wstappwppl
      601 parlliypcq pcfsapglah ksahpaqssl wllaqaavyl qpvgpvepgv rslfqapqss
      661 lregppgvqs apntaal
//
LOCUS       XP_061012626             631 aa            linear   MAM 02-DEC-2023
DEFINITION  lysosomal cobalamin transporter ABCD4 isoform X2 [Dama dama].
ACCESSION   XP_061012626
VERSION     XP_061012626.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156643.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..631
                     /product="lysosomal cobalamin transporter ABCD4 isoform
                     X2"
                     /calculated_mol_wt=71037
     Region          19..584
                     /region_name="YddA"
                     /note="ABC-type uncharacterized transport system, permease
                     and ATPase components [General function prediction only];
                     COG4178"
                     /db_xref="CDD:443337"
     CDS             1..631
                     /gene="ABCD4"
                     /coded_by="XM_061156643.1:119..2014"
                     /db_xref="GeneID:133066025"
ORIGIN      
        1 mairgpaprp ggrprlglqf lqrflqiqkv lfpswssqna lmfltllcva lleqlviyrv
       61 glipsqyfgv lgnkdlngfk tltflsvvli vlnsmlksfd qftcnllyvs wrkdltehlh
      121 rlyfrgrvyy tlnvlrddvd npdqrisqdv erfcrqlssm asklivspft lvyytyqcfr
      181 stgwlgpvsi fgyfilgtvv nrvlmgpiva klvqqekleg dfrfkhmqir vnaepaaffr
      241 aghvehmrtd rrlqrllqtq relmskelwl yiginmfdyl gsilsyvvia ipifsgvygd
      301 lspaelsslv sknafvcmyl iscfsqlidl sttlsdvagy thrigelqet lldmtpksqd
      361 gefldesqwd lardpggpat epadtaflle rvcicapssh kplikdlslk isegqsllit
      421 gntgtgktsl lrvlgglwas argsvqmvad fgphgvlflp qkpfftdgtl reqviyplke
      481 iypdsgstdd erimrflela glsslvarte gldqqvdwnw ydvlspgemq rlsfarlfyl
      541 qpkyavldea tsalteeves elyrigqqlg mtfisvghrr slekdaglgl wstappwppl
      601 parlliypcq pcfsapgdlp nprikplspt l
//
LOCUS       XP_061012627             620 aa            linear   MAM 02-DEC-2023
DEFINITION  lysosomal cobalamin transporter ABCD4 isoform X3 [Dama dama].
ACCESSION   XP_061012627
VERSION     XP_061012627.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156644.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..620
                     /product="lysosomal cobalamin transporter ABCD4 isoform
                     X3"
                     /calculated_mol_wt=69733
     Region          19..584
                     /region_name="YddA"
                     /note="ABC-type uncharacterized transport system, permease
                     and ATPase components [General function prediction only];
                     COG4178"
                     /db_xref="CDD:443337"
     CDS             1..620
                     /gene="ABCD4"
                     /coded_by="XM_061156644.1:119..1981"
                     /db_xref="GeneID:133066025"
ORIGIN      
        1 mairgpaprp ggrprlglqf lqrflqiqkv lfpswssqna lmfltllcva lleqlviyrv
       61 glipsqyfgv lgnkdlngfk tltflsvvli vlnsmlksfd qftcnllyvs wrkdltehlh
      121 rlyfrgrvyy tlnvlrddvd npdqrisqdv erfcrqlssm asklivspft lvyytyqcfr
      181 stgwlgpvsi fgyfilgtvv nrvlmgpiva klvqqekleg dfrfkhmqir vnaepaaffr
      241 aghvehmrtd rrlqrllqtq relmskelwl yiginmfdyl gsilsyvvia ipifsgvygd
      301 lspaelsslv sknafvcmyl iscfsqlidl sttlsdvagy thrigelqet lldmtpksqd
      361 gefldesqwd lardpggpat epadtaflle rvcicapssh kplikdlslk isegqsllit
      421 gntgtgktsl lrvlgglwas argsvqmvad fgphgvlflp qkpfftdgtl reqviyplke
      481 iypdsgstdd erimrflela glsslvarte gldqqvdwnw ydvlspgemq rlsfarlfyl
      541 qpkyavldea tsalteeves elyrigqqlg mtfisvghrr slekdaglgl wstappwppl
      601 parlliypcq pcfsapapga
//
LOCUS       XP_061012628             617 aa            linear   MAM 02-DEC-2023
DEFINITION  lysosomal cobalamin transporter ABCD4 isoform X4 [Dama dama].
ACCESSION   XP_061012628
VERSION     XP_061012628.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156645.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..617
                     /product="lysosomal cobalamin transporter ABCD4 isoform
                     X4"
                     /calculated_mol_wt=68337
     Region          <83..524
                     /region_name="YddA"
                     /note="ABC-type uncharacterized transport system, permease
                     and ATPase components [General function prediction only];
                     COG4178"
                     /db_xref="CDD:443337"
     CDS             1..617
                     /gene="ABCD4"
                     /coded_by="XM_061156645.1:126..1979"
                     /db_xref="GeneID:133066025"
ORIGIN      
        1 mpedrelkee aksssllsis ypgppnkapp rqreksllek skktgalifn skklllsrtq
       61 sgipvpilsp llgslsprfp yrdqrisqdv erfcrqlssm asklivspft lvyytyqcfr
      121 stgwlgpvsi fgyfilgtvv nrvlmgpiva klvqqekleg dfrfkhmqir vnaepaaffr
      181 aghvehmrtd rrlqrllqtq relmskelwl yiginmfdyl gsilsyvvia ipifsgvygd
      241 lspaelsslv sknafvcmyl iscfsqlidl sttlsdvagy thrigelqet lldmtpksqd
      301 gefldesqwd lardpggpat epadtaflle rvcicapssh kplikdlslk isegqsllit
      361 gntgtgktsl lrvlgglwas argsvqmvad fgphgvlflp qkpfftdgtl reqviyplke
      421 iypdsgstdd erimrflela glsslvarte gldqqvdwnw ydvlspgemq rlsfarlfyl
      481 qpkyavldea tsalteeves elyrigqqlg mtfisvghrr slekdaglgl wstappwppl
      541 parlliypcq pcfsapglah ksahpaqssl wllaqaavyl qpvgpvepgv rslfqapqss
      601 lregppgvqs apntaal
//
LOCUS       XP_061012629             606 aa            linear   MAM 02-DEC-2023
DEFINITION  lysosomal cobalamin transporter ABCD4 isoform X5 [Dama dama].
ACCESSION   XP_061012629
VERSION     XP_061012629.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156646.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..606
                     /product="lysosomal cobalamin transporter ABCD4 isoform
                     X5"
                     /calculated_mol_wt=68629
     Region          19..603
                     /region_name="YddA"
                     /note="ABC-type uncharacterized transport system, permease
                     and ATPase components [General function prediction only];
                     COG4178"
                     /db_xref="CDD:443337"
     CDS             1..606
                     /gene="ABCD4"
                     /coded_by="XM_061156646.1:119..1939"
                     /db_xref="GeneID:133066025"
ORIGIN      
        1 mairgpaprp ggrprlglqf lqrflqiqkv lfpswssqna lmfltllcva lleqlviyrv
       61 glipsqyfgv lgnkdlngfk tltflsvvli vlnsmlksfd qftcnllyvs wrkdltehlh
      121 rlyfrgrvyy tlnvlrddvd npdqrisqdv erfcrqlssm asklivspft lvyytyqcfr
      181 stgwlgpvsi fgyfilgtvv nrvlmgpiva klvqqekleg dfrfkhmqir vnaepaaffr
      241 aghvehmrtd rrlqrllqtq relmskelwl yiginmfdyl gsilsyvvia ipifsgvygd
      301 lspaelsslv sknafvcmyl iscfsqlidl sttlsdvagy thrigelqet lldmtpksqd
      361 gefldesqwd lardpggpat epadtaflle rvcicapssh kplikdlslk isegqsllit
      421 gntgtgktsl lrvlgglwas argsvqmvad fgphgvlflp qkpfftdgtl reqviyplke
      481 iypdsgstdd erimrflela glsslvarte gldqqvdwnw ydvlspgemq rlsfarlfyl
      541 qpkyavldea tsalteeves elyrigqqlg mtfisvghrr slekfhslvl rlcgdgrwel
      601 trikve
//
LOCUS       XP_061012630             591 aa            linear   MAM 02-DEC-2023
DEFINITION  lysosomal cobalamin transporter ABCD4 isoform X6 [Dama dama].
ACCESSION   XP_061012630
VERSION     XP_061012630.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156647.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..591
                     /product="lysosomal cobalamin transporter ABCD4 isoform
                     X6"
                     /calculated_mol_wt=66807
     Region          19..584
                     /region_name="YddA"
                     /note="ABC-type uncharacterized transport system, permease
                     and ATPase components [General function prediction only];
                     COG4178"
                     /db_xref="CDD:443337"
     CDS             1..591
                     /gene="ABCD4"
                     /coded_by="XM_061156647.1:119..1894"
                     /db_xref="GeneID:133066025"
ORIGIN      
        1 mairgpaprp ggrprlglqf lqrflqiqkv lfpswssqna lmfltllcva lleqlviyrv
       61 glipsqyfgv lgnkdlngfk tltflsvvli vlnsmlksfd qftcnllyvs wrkdltehlh
      121 rlyfrgrvyy tlnvlrddvd npdqrisqdv erfcrqlssm asklivspft lvyytyqcfr
      181 stgwlgpvsi fgyfilgtvv nrvlmgpiva klvqqekleg dfrfkhmqir vnaepaaffr
      241 aghvehmrtd rrlqrllqtq relmskelwl yiginmfdyl gsilsyvvia ipifsgvygd
      301 lspaelsslv sknafvcmyl iscfsqlidl sttlsdvagy thrigelqet lldmtpksqd
      361 gefldesqwd lardpggpat epadtaflle rvcicapssh kplikdlslk isegqsllit
      421 gntgtgktsl lrvlgglwas argsvqmvad fgphgvlflp qkpfftdgtl reqviyplke
      481 iypdsgstdd erimrflela glsslvarte gldqqvdwnw ydvlspgemq rlsfarlfyl
      541 qpkyavldea tsalteeves elyrigqqlg mtfisvghrr slekgsnpyr l
//
LOCUS       XP_061012631             545 aa            linear   MAM 02-DEC-2023
DEFINITION  lysosomal cobalamin transporter ABCD4 isoform X7 [Dama dama].
ACCESSION   XP_061012631
VERSION     XP_061012631.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156648.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..545
                     /product="lysosomal cobalamin transporter ABCD4 isoform
                     X7"
                     /calculated_mol_wt=60466
     Region          <11..452
                     /region_name="YddA"
                     /note="ABC-type uncharacterized transport system, permease
                     and ATPase components [General function prediction only];
                     COG4178"
                     /db_xref="CDD:443337"
     CDS             1..545
                     /gene="ABCD4"
                     /coded_by="XM_061156648.1:253..1890"
                     /db_xref="GeneID:133066025"
ORIGIN      
        1 mtsitrrrpl dqrisqdver fcrqlssmas klivspftlv yytyqcfrst gwlgpvsifg
       61 yfilgtvvnr vlmgpivakl vqqeklegdf rfkhmqirvn aepaaffrag hvehmrtdrr
      121 lqrllqtqre lmskelwlyi ginmfdylgs ilsyvviaip ifsgvygdls paelsslvsk
      181 nafvcmylis cfsqlidlst tlsdvagyth rigelqetll dmtpksqdge fldesqwdla
      241 rdpggpatep adtafllerv cicapsshkp likdlslkis egqsllitgn tgtgktsllr
      301 vlgglwasar gsvqmvadfg phgvlflpqk pfftdgtlre qviyplkeiy pdsgstdder
      361 imrflelagl sslvartegl dqqvdwnwyd vlspgemqrl sfarlfylqp kyavldeats
      421 alteevesel yrigqqlgmt fisvghrrsl ekdaglglws tappwpplpa rlliypcqpc
      481 fsapglahks ahpaqsslwl laqaavylqp vgpvepgvrs lfqapqsslr egppgvqsap
      541 ntaal
//
LOCUS       XP_061012632             545 aa            linear   MAM 02-DEC-2023
DEFINITION  lysosomal cobalamin transporter ABCD4 isoform X7 [Dama dama].
ACCESSION   XP_061012632
VERSION     XP_061012632.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156649.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..545
                     /product="lysosomal cobalamin transporter ABCD4 isoform
                     X7"
                     /calculated_mol_wt=60466
     Region          <11..452
                     /region_name="YddA"
                     /note="ABC-type uncharacterized transport system, permease
                     and ATPase components [General function prediction only];
                     COG4178"
                     /db_xref="CDD:443337"
     CDS             1..545
                     /gene="ABCD4"
                     /coded_by="XM_061156649.1:254..1891"
                     /db_xref="GeneID:133066025"
ORIGIN      
        1 mtsitrrrpl dqrisqdver fcrqlssmas klivspftlv yytyqcfrst gwlgpvsifg
       61 yfilgtvvnr vlmgpivakl vqqeklegdf rfkhmqirvn aepaaffrag hvehmrtdrr
      121 lqrllqtqre lmskelwlyi ginmfdylgs ilsyvviaip ifsgvygdls paelsslvsk
      181 nafvcmylis cfsqlidlst tlsdvagyth rigelqetll dmtpksqdge fldesqwdla
      241 rdpggpatep adtafllerv cicapsshkp likdlslkis egqsllitgn tgtgktsllr
      301 vlgglwasar gsvqmvadfg phgvlflpqk pfftdgtlre qviyplkeiy pdsgstdder
      361 imrflelagl sslvartegl dqqvdwnwyd vlspgemqrl sfarlfylqp kyavldeats
      421 alteevesel yrigqqlgmt fisvghrrsl ekdaglglws tappwpplpa rlliypcqpc
      481 fsapglahks ahpaqsslwl laqaavylqp vgpvepgvrs lfqapqsslr egppgvqsap
      541 ntaal
//
LOCUS       XP_061012633             583 aa            linear   MAM 02-DEC-2023
DEFINITION  lysosomal cobalamin transporter ABCD4 isoform X8 [Dama dama].
ACCESSION   XP_061012633
VERSION     XP_061012633.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156650.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..583
                     /product="lysosomal cobalamin transporter ABCD4 isoform
                     X8"
                     /calculated_mol_wt=65188
     Region          17..490
                     /region_name="YddA"
                     /note="ABC-type uncharacterized transport system, permease
                     and ATPase components [General function prediction only];
                     COG4178"
                     /db_xref="CDD:443337"
     CDS             1..583
                     /gene="ABCD4"
                     /coded_by="XM_061156650.1:249..2000"
                     /db_xref="GeneID:133066025"
ORIGIN      
        1 mlksfdqftc nllyvswrkd ltehlhrlyf rgrvyytlnv lrddvdnpdq risqdverfc
       61 rqlssmaskl ivspftlvyy tyqcfrstgw lgpvsifgyf ilgtvvnrvl mgpivaklvq
      121 qeklegdfrf khmqirvnae paaffraghv ehmrtdrrlq rllqtqrelm skelwlyigi
      181 nmfdylgsil syvviaipif sgvygdlspa elsslvskna fvcmyliscf sqlidlsttl
      241 sdvagythri gelqetlldm tpksqdgefl desqwdlard pggpatepad tafllervci
      301 capsshkpli kdlslkiseg qsllitgntg tgktsllrvl gglwasargs vqmvadfgph
      361 gvlflpqkpf ftdgtlreqv iyplkeiypd sgstdderim rflelaglss lvartegldq
      421 qvdwnwydvl spgemqrlsf arlfylqpky avldeatsal teeveselyr igqqlgmtfi
      481 svghrrslek daglglwsta ppwpplparl liypcqpcfs apglahksah paqsslwlla
      541 qaavylqpvg pvepgvrslf qapqsslreg ppgvqsapnt aal
//
LOCUS       XP_061012634             446 aa            linear   MAM 02-DEC-2023
DEFINITION  lysosomal cobalamin transporter ABCD4 isoform X9 [Dama dama].
ACCESSION   XP_061012634
VERSION     XP_061012634.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156651.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..446
                     /product="lysosomal cobalamin transporter ABCD4 isoform
                     X9"
                     /calculated_mol_wt=49050
     Region          <7..353
                     /region_name="YddA"
                     /note="ABC-type uncharacterized transport system, permease
                     and ATPase components [General function prediction only];
                     COG4178"
                     /db_xref="CDD:443337"
     CDS             1..446
                     /gene="ABCD4"
                     /coded_by="XM_061156651.1:153..1493"
                     /db_xref="GeneID:133066025"
ORIGIN      
        1 mlslllffra ghvehmrtdr rlqrllqtqr elmskelwly iginmfdylg silsyvviai
       61 pifsgvygdl spaelsslvs knafvcmyli scfsqlidls ttlsdvagyt hrigelqetl
      121 ldmtpksqdg efldesqwdl ardpggpate padtafller vcicapsshk plikdlslki
      181 segqsllitg ntgtgktsll rvlgglwasa rgsvqmvadf gphgvlflpq kpfftdgtlr
      241 eqviyplkei ypdsgstdde rimrflelag lsslvarteg ldqqvdwnwy dvlspgemqr
      301 lsfarlfylq pkyavldeat salteevese lyrigqqlgm tfisvghrrs lekdaglglw
      361 stappwpplp arlliypcqp cfsapglahk sahpaqsslw llaqaavylq pvgpvepgvr
      421 slfqapqssl regppgvqsa pntaal
//
LOCUS       XP_061012635             542 aa            linear   MAM 02-DEC-2023
DEFINITION  basal body-orientation factor 1 isoform X1 [Dama dama].
ACCESSION   XP_061012635
VERSION     XP_061012635.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156652.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..542
                     /product="basal body-orientation factor 1 isoform X1"
                     /calculated_mol_wt=63771
     Region          83..276
                     /region_name="DUF4515"
                     /note="Domain of unknown function (DUF4515); pfam14988"
                     /db_xref="CDD:405647"
     CDS             1..542
                     /gene="BBOF1"
                     /coded_by="XM_061156652.1:89..1717"
                     /db_xref="GeneID:133066026"
ORIGIN      
        1 mpakgkdkkk gkgkdkgkdk dkkkkkiikl eesvveraka naslwearle vtelsrieyr
       61 dtsrrlarcn eelkrqqykm ekdtmsvlnh lkkqdqekdn lieklkqqln etkekaqeek
      121 ekleqkftmq vselegqfhq kakeigmvqt elktikqfqk rkiqvekeld dlkedlrnte
      181 rkhqetlrrl egkffeekhr lekeaekkii mladrahhea vvqlnnagrs vfkeniylqk
      241 alayhlkead alqknsqklq etqtflleqk eindllvkek imqltqqrlq iqtlqkkvvs
      301 lenalvcmtk efetevlklq qqamvenqag qveifklqql lqmkdkemnr ikklaknild
      361 erteverffl dalhqvkkqi lfsrkhykqv aqtafnlkmr eacagrmeyp kirtfdgreh
      421 stnsvnqdlm eadkwtdiqg nvdigdltwe qkekvlrllf akmngfvprk ysqssrppvp
      481 dyvvpddett efgdesklqd qtfitqqvpi lnstgellir niqkgsqesd tvrsynvtkq
      541 ym
//
LOCUS       XP_061012636             534 aa            linear   MAM 02-DEC-2023
DEFINITION  basal body-orientation factor 1 isoform X2 [Dama dama].
ACCESSION   XP_061012636
VERSION     XP_061012636.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156653.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..534
                     /product="basal body-orientation factor 1 isoform X2"
                     /calculated_mol_wt=62771
     Region          83..276
                     /region_name="DUF4515"
                     /note="Domain of unknown function (DUF4515); pfam14988"
                     /db_xref="CDD:405647"
     CDS             1..534
                     /gene="BBOF1"
                     /coded_by="XM_061156653.1:89..1693"
                     /db_xref="GeneID:133066026"
ORIGIN      
        1 mpakgkdkkk gkgkdkgkdk dkkkkkiikl eesvveraka naslwearle vtelsrieyr
       61 dtsrrlarcn eelkrqqykm ekdtmsvlnh lkkqdqekdn lieklkqqln etkekaqeek
      121 ekleqkftmq vselegqfhq kakeigmvqt elktikqfqk rkiqvekeld dlkedlrnte
      181 rkhqetlrrl egkffeekhr lekeaekkii mladrahhea vvqlnnagrs vfkeniylqk
      241 alayhlkead alqknsqklq etqtflleqk eindllvkek imqltqqrlq iqtlqkkvvs
      301 lenalvcmtk efetevlklq qqamvenqag qveifklqql lqmkdkemnr ikklaknild
      361 erteverffl dalhqvkkqi lfsrkhykqv aqtafnlkmr eacagrmeyp kirtfdgreh
      421 stnsvnqdlm eadkwtdiqg nvdigdltwe qkekvlrllf akmngfvprk ysqssrppvp
      481 dyvvpddett efgdesklqd qtfitqqvpi lnstgellir niqkgsqesd tnek
//
LOCUS       XP_061012637             501 aa            linear   MAM 02-DEC-2023
DEFINITION  basal body-orientation factor 1 isoform X3 [Dama dama].
ACCESSION   XP_061012637
VERSION     XP_061012637.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156654.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..501
                     /product="basal body-orientation factor 1 isoform X3"
                     /calculated_mol_wt=59044
     Region          83..276
                     /region_name="DUF4515"
                     /note="Domain of unknown function (DUF4515); pfam14988"
                     /db_xref="CDD:405647"
     CDS             1..501
                     /gene="BBOF1"
                     /coded_by="XM_061156654.1:89..1594"
                     /db_xref="GeneID:133066026"
ORIGIN      
        1 mpakgkdkkk gkgkdkgkdk dkkkkkiikl eesvveraka naslwearle vtelsrieyr
       61 dtsrrlarcn eelkrqqykm ekdtmsvlnh lkkqdqekdn lieklkqqln etkekaqeek
      121 ekleqkftmq vselegqfhq kakeigmvqt elktikqfqk rkiqvekeld dlkedlrnte
      181 rkhqetlrrl egkffeekhr lekeaekkii mladrahhea vvqlnnagrs vfkeniylqk
      241 alayhlkead alqknsqklq etqtflleqk eindllvkek imqltqqrlq iqtlqkkvvs
      301 lenalvcmtk efetevlklq qqamvenqag qveifklqql lqmkdkemnr ikklaknild
      361 erteverffl dalhqvkkqi lfsrkhykqv aqtafnlkmr eacagrmeyp kirtfdgreh
      421 stnsvnqdlm eadkwtdiqg nvdigdltwe qkekvlrllf akmngfvprk ysqssrppvp
      481 dyvvpddett efgmknsnli t
//
LOCUS       XP_061012638             463 aa            linear   MAM 02-DEC-2023
DEFINITION  basal body-orientation factor 1 isoform X4 [Dama dama].
ACCESSION   XP_061012638
VERSION     XP_061012638.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156655.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..463
                     /product="basal body-orientation factor 1 isoform X4"
                     /calculated_mol_wt=54499
     Region          4..197
                     /region_name="DUF4515"
                     /note="Domain of unknown function (DUF4515); pfam14988"
                     /db_xref="CDD:405647"
     CDS             1..463
                     /gene="BBOF1"
                     /coded_by="XM_061156655.1:885..2276"
                     /db_xref="GeneID:133066026"
ORIGIN      
        1 mekdtmsvln hlkkqdqekd nlieklkqql netkekaqee kekleqkftm qvselegqfh
       61 qkakeigmvq telktikqfq krkiqvekel ddlkedlrnt erkhqetlrr legkffeekh
      121 rlekeaekki imladrahhe avvqlnnagr svfkeniylq kalayhlkea dalqknsqkl
      181 qetqtflleq keindllvke kimqltqqrl qiqtlqkkvv slenalvcmt kefetevlkl
      241 qqqamvenqa gqveifklqq llqmkdkemn rikklaknil derteverff ldalhqvkkq
      301 ilfsrkhykq vaqtafnlkm reacagrmey pkirtfdgre hstnsvnqdl meadkwtdiq
      361 gnvdigdltw eqkekvlrll fakmngfvpr kysqssrppv pdyvvpddet tefgdesklq
      421 dqtfitqqvp ilnstgelli rniqkgsqes dtvrsynvtk qym
//
LOCUS       XP_061012639             463 aa            linear   MAM 02-DEC-2023
DEFINITION  basal body-orientation factor 1 isoform X4 [Dama dama].
ACCESSION   XP_061012639
VERSION     XP_061012639.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156656.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..463
                     /product="basal body-orientation factor 1 isoform X4"
                     /calculated_mol_wt=54499
     Region          4..197
                     /region_name="DUF4515"
                     /note="Domain of unknown function (DUF4515); pfam14988"
                     /db_xref="CDD:405647"
     CDS             1..463
                     /gene="BBOF1"
                     /coded_by="XM_061156656.1:275..1666"
                     /db_xref="GeneID:133066026"
ORIGIN      
        1 mekdtmsvln hlkkqdqekd nlieklkqql netkekaqee kekleqkftm qvselegqfh
       61 qkakeigmvq telktikqfq krkiqvekel ddlkedlrnt erkhqetlrr legkffeekh
      121 rlekeaekki imladrahhe avvqlnnagr svfkeniylq kalayhlkea dalqknsqkl
      181 qetqtflleq keindllvke kimqltqqrl qiqtlqkkvv slenalvcmt kefetevlkl
      241 qqqamvenqa gqveifklqq llqmkdkemn rikklaknil derteverff ldalhqvkkq
      301 ilfsrkhykq vaqtafnlkm reacagrmey pkirtfdgre hstnsvnqdl meadkwtdiq
      361 gnvdigdltw eqkekvlrll fakmngfvpr kysqssrppv pdyvvpddet tefgdesklq
      421 dqtfitqqvp ilnstgelli rniqkgsqes dtvrsynvtk qym
//
LOCUS       XP_061012642             463 aa            linear   MAM 02-DEC-2023
DEFINITION  basal body-orientation factor 1 isoform X4 [Dama dama].
ACCESSION   XP_061012642
VERSION     XP_061012642.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156659.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..463
                     /product="basal body-orientation factor 1 isoform X4"
                     /calculated_mol_wt=54499
     Region          4..197
                     /region_name="DUF4515"
                     /note="Domain of unknown function (DUF4515); pfam14988"
                     /db_xref="CDD:405647"
     CDS             1..463
                     /gene="BBOF1"
                     /coded_by="XM_061156659.1:542..1933"
                     /db_xref="GeneID:133066026"
ORIGIN      
        1 mekdtmsvln hlkkqdqekd nlieklkqql netkekaqee kekleqkftm qvselegqfh
       61 qkakeigmvq telktikqfq krkiqvekel ddlkedlrnt erkhqetlrr legkffeekh
      121 rlekeaekki imladrahhe avvqlnnagr svfkeniylq kalayhlkea dalqknsqkl
      181 qetqtflleq keindllvke kimqltqqrl qiqtlqkkvv slenalvcmt kefetevlkl
      241 qqqamvenqa gqveifklqq llqmkdkemn rikklaknil derteverff ldalhqvkkq
      301 ilfsrkhykq vaqtafnlkm reacagrmey pkirtfdgre hstnsvnqdl meadkwtdiq
      361 gnvdigdltw eqkekvlrll fakmngfvpr kysqssrppv pdyvvpddet tefgdesklq
      421 dqtfitqqvp ilnstgelli rniqkgsqes dtvrsynvtk qym
//
LOCUS       XP_061012643             535 aa            linear   MAM 02-DEC-2023
DEFINITION  methylmalonate-semialdehyde/malonate-semialdehyde dehydrogenase
            [acylating], mitochondrial [Dama dama].
ACCESSION   XP_061012643
VERSION     XP_061012643.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156660.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..535
                     /product="methylmalonate-semialdehyde/malonate-
                     semialdehyde dehydrogenase [acylating], mitochondrial"
                     /calculated_mol_wt=57713
     Region          40..516
                     /region_name="ALDH_F6_MMSDH"
                     /note="Methylmalonate semialdehyde dehydrogenase and ALDH
                     family members 6A1 and 6B2; cd07085"
                     /db_xref="CDD:143404"
     Site            order(97,99,103,106,110,143,146..147,156..163,168,171,174,
                     267,271,274,277,279,452,454..455,457..458,461,464..465,
                     467,469..472,481,485,487,501,508..513,515..516)
                     /site_type="other"
                     /note="tetrameric interface [polypeptide binding]"
                     /db_xref="CDD:143404"
     Site            order(183..186,194,209,212,242,259..262,265,283..285,317,
                     417,419,445)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:143404"
     Site            order(186,283,314,317)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143404"
     CDS             1..535
                     /gene="ALDH6A1"
                     /coded_by="XM_061156660.1:120..1727"
                     /db_xref="GeneID:133066028"
ORIGIN      
        1 maavaaaaaa lrarilqvss kvnsswqpas sfssssvptv klfidgkfie sksdkwidih
       61 npatnevigr vpqstkaemd aavssckrtf pawadtsvls rqqvllryqq likenlkeia
      121 rlitleqgkt ladaegdvfr glqvvehacs vtslilgetm psitkdmdly syrlplgvca
      181 giapfnfpam iplwmfpmam vcgntflmkp servpgatml laklfqdsga pdgtlniihg
      241 qheavnficd hpdikaisfv gsnqageyif ergsrhgkrv qanmgaknhg vvmpdanken
      301 tlnqlvgaaf gaagqrcmal stailvgeak kwlpelvera kklrvnagdq pgadlgplit
      361 pqakervcnl idsgtkegas illdgrsikv kgyengnfvg ptiisnvkpn mtcykeeifg
      421 pvlvvletdt ldeaikivnd npygngtaif ttngatarky shlvdvgqvg vnvpipvplp
      481 mfsftgsras frgdtnfygk qgiqfytqlk titsqwkeed aslsspavvm ptmgr
//
LOCUS       XP_061012644             469 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquinone biosynthesis monooxygenase COQ6, mitochondrial [Dama
            dama].
ACCESSION   XP_061012644
VERSION     XP_061012644.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156661.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..469
                     /product="ubiquinone biosynthesis monooxygenase COQ6,
                     mitochondrial"
                     /calculated_mol_wt=51197
     Region          50..464
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     CDS             1..469
                     /gene="COQ6"
                     /coded_by="XM_061156661.1:58..1467"
                     /db_xref="GeneID:133066029"
ORIGIN      
        1 mvahlarvrw davfaaaqkg prvscrrwag asadnvydvv vsggglvgsa macalghdih
       61 fcdkkillle agpkkvlekl petysnrvss ispgsatlls sfgawdhicn mryrafrrmq
      121 vwdacseali mfdkdnlddm gyivendvim halskqleav sdrvtvlyks ravsytwpyp
      181 fsmadsspwv hitlgdgrtl qtklligadg hnsgvrqaag irnvswnydq savvatlhls
      241 eatennvawq rflpsgpial lplsdtmssl vwstshehaa elvsmeeeef vdainsafws
      301 dvnhtdfids agsmlqsava flkptrvsar qlppsvarvd arsrvlfplg lghaaeyvrp
      361 rlaligdaah rvhplagqgv nmgfgdissl lhhlstaafn grdlgsmshl tsyetdrqrh
      421 ntallaatdl lkrlystrat plvllrtwgl qatnavsplk eqimafask
//
LOCUS       XP_061012645             428 aa            linear   MAM 02-DEC-2023
DEFINITION  nucleoside diphosphate phosphatase ENTPD5 isoform X1 [Dama dama].
ACCESSION   XP_061012645
VERSION     XP_061012645.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156662.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..428
                     /product="nucleoside diphosphate phosphatase ENTPD5
                     isoform X1"
                     /calculated_mol_wt=47268
     Region          47..421
                     /region_name="ASKHA_NBD_NTPDase5"
                     /note="nucleotide-binding domain (NBD) of ectonucleoside
                     triphosphate diphosphohydrolase 5 (NTPDase5) and similar
                     proteins; cd24114"
                     /db_xref="CDD:466964"
     CDS             1..428
                     /gene="ENTPD5"
                     /coded_by="XM_061156662.1:284..1570"
                     /db_xref="GeneID:133066030"
ORIGIN      
        1 maisqgaaff mlvascvcst vfhreqqtwf egvflssmcp vnvsagtlyg imfdagstgt
       61 rihvytfvqk ipgqlpvleg eifdsvkpgl safvdqpkqg aesvqellev akdsippshw
      121 krtpvvlkat aglrllpeek aeallfevke ifkkspflvp ddsvsimdgs yegilawvtv
      181 nfltgqlhgh nqetvgtldl ggastqitfl pqfektleqt prgyltsfem fnstyklyth
      241 sylgfglkaa rlatlgalet egidghtfrs aclprwleae wifggvkyqy ggnqegevgf
      301 epcyaevlrv vqgklhqpde vqrgsfyafs yyydravdtd midyekggvl kvedferkar
      361 evcdnlenft sgspflcmdl tyitallkdg fgfasstvlq ltkkvnniet gwalgatfhl
      421 lqslgish
//
LOCUS       XP_061012646             428 aa            linear   MAM 02-DEC-2023
DEFINITION  nucleoside diphosphate phosphatase ENTPD5 isoform X1 [Dama dama].
ACCESSION   XP_061012646
VERSION     XP_061012646.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156663.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..428
                     /product="nucleoside diphosphate phosphatase ENTPD5
                     isoform X1"
                     /calculated_mol_wt=47268
     Region          47..421
                     /region_name="ASKHA_NBD_NTPDase5"
                     /note="nucleotide-binding domain (NBD) of ectonucleoside
                     triphosphate diphosphohydrolase 5 (NTPDase5) and similar
                     proteins; cd24114"
                     /db_xref="CDD:466964"
     CDS             1..428
                     /gene="ENTPD5"
                     /coded_by="XM_061156663.1:287..1573"
                     /db_xref="GeneID:133066030"
ORIGIN      
        1 maisqgaaff mlvascvcst vfhreqqtwf egvflssmcp vnvsagtlyg imfdagstgt
       61 rihvytfvqk ipgqlpvleg eifdsvkpgl safvdqpkqg aesvqellev akdsippshw
      121 krtpvvlkat aglrllpeek aeallfevke ifkkspflvp ddsvsimdgs yegilawvtv
      181 nfltgqlhgh nqetvgtldl ggastqitfl pqfektleqt prgyltsfem fnstyklyth
      241 sylgfglkaa rlatlgalet egidghtfrs aclprwleae wifggvkyqy ggnqegevgf
      301 epcyaevlrv vqgklhqpde vqrgsfyafs yyydravdtd midyekggvl kvedferkar
      361 evcdnlenft sgspflcmdl tyitallkdg fgfasstvlq ltkkvnniet gwalgatfhl
      421 lqslgish
//
LOCUS       XP_061012647             428 aa            linear   MAM 02-DEC-2023
DEFINITION  nucleoside diphosphate phosphatase ENTPD5 isoform X1 [Dama dama].
ACCESSION   XP_061012647
VERSION     XP_061012647.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156664.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..428
                     /product="nucleoside diphosphate phosphatase ENTPD5
                     isoform X1"
                     /calculated_mol_wt=47268
     Region          47..421
                     /region_name="ASKHA_NBD_NTPDase5"
                     /note="nucleotide-binding domain (NBD) of ectonucleoside
                     triphosphate diphosphohydrolase 5 (NTPDase5) and similar
                     proteins; cd24114"
                     /db_xref="CDD:466964"
     CDS             1..428
                     /gene="ENTPD5"
                     /coded_by="XM_061156664.1:337..1623"
                     /db_xref="GeneID:133066030"
ORIGIN      
        1 maisqgaaff mlvascvcst vfhreqqtwf egvflssmcp vnvsagtlyg imfdagstgt
       61 rihvytfvqk ipgqlpvleg eifdsvkpgl safvdqpkqg aesvqellev akdsippshw
      121 krtpvvlkat aglrllpeek aeallfevke ifkkspflvp ddsvsimdgs yegilawvtv
      181 nfltgqlhgh nqetvgtldl ggastqitfl pqfektleqt prgyltsfem fnstyklyth
      241 sylgfglkaa rlatlgalet egidghtfrs aclprwleae wifggvkyqy ggnqegevgf
      301 epcyaevlrv vqgklhqpde vqrgsfyafs yyydravdtd midyekggvl kvedferkar
      361 evcdnlenft sgspflcmdl tyitallkdg fgfasstvlq ltkkvnniet gwalgatfhl
      421 lqslgish
//
LOCUS       XP_061012648             428 aa            linear   MAM 02-DEC-2023
DEFINITION  nucleoside diphosphate phosphatase ENTPD5 isoform X1 [Dama dama].
ACCESSION   XP_061012648
VERSION     XP_061012648.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156665.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..428
                     /product="nucleoside diphosphate phosphatase ENTPD5
                     isoform X1"
                     /calculated_mol_wt=47268
     Region          47..421
                     /region_name="ASKHA_NBD_NTPDase5"
                     /note="nucleotide-binding domain (NBD) of ectonucleoside
                     triphosphate diphosphohydrolase 5 (NTPDase5) and similar
                     proteins; cd24114"
                     /db_xref="CDD:466964"
     CDS             1..428
                     /gene="ENTPD5"
                     /coded_by="XM_061156665.1:325..1611"
                     /db_xref="GeneID:133066030"
ORIGIN      
        1 maisqgaaff mlvascvcst vfhreqqtwf egvflssmcp vnvsagtlyg imfdagstgt
       61 rihvytfvqk ipgqlpvleg eifdsvkpgl safvdqpkqg aesvqellev akdsippshw
      121 krtpvvlkat aglrllpeek aeallfevke ifkkspflvp ddsvsimdgs yegilawvtv
      181 nfltgqlhgh nqetvgtldl ggastqitfl pqfektleqt prgyltsfem fnstyklyth
      241 sylgfglkaa rlatlgalet egidghtfrs aclprwleae wifggvkyqy ggnqegevgf
      301 epcyaevlrv vqgklhqpde vqrgsfyafs yyydravdtd midyekggvl kvedferkar
      361 evcdnlenft sgspflcmdl tyitallkdg fgfasstvlq ltkkvnniet gwalgatfhl
      421 lqslgish
//
LOCUS       XP_061012649             428 aa            linear   MAM 02-DEC-2023
DEFINITION  nucleoside diphosphate phosphatase ENTPD5 isoform X1 [Dama dama].
ACCESSION   XP_061012649
VERSION     XP_061012649.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156666.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..428
                     /product="nucleoside diphosphate phosphatase ENTPD5
                     isoform X1"
                     /calculated_mol_wt=47268
     Region          47..421
                     /region_name="ASKHA_NBD_NTPDase5"
                     /note="nucleotide-binding domain (NBD) of ectonucleoside
                     triphosphate diphosphohydrolase 5 (NTPDase5) and similar
                     proteins; cd24114"
                     /db_xref="CDD:466964"
     CDS             1..428
                     /gene="ENTPD5"
                     /coded_by="XM_061156666.1:285..1571"
                     /db_xref="GeneID:133066030"
ORIGIN      
        1 maisqgaaff mlvascvcst vfhreqqtwf egvflssmcp vnvsagtlyg imfdagstgt
       61 rihvytfvqk ipgqlpvleg eifdsvkpgl safvdqpkqg aesvqellev akdsippshw
      121 krtpvvlkat aglrllpeek aeallfevke ifkkspflvp ddsvsimdgs yegilawvtv
      181 nfltgqlhgh nqetvgtldl ggastqitfl pqfektleqt prgyltsfem fnstyklyth
      241 sylgfglkaa rlatlgalet egidghtfrs aclprwleae wifggvkyqy ggnqegevgf
      301 epcyaevlrv vqgklhqpde vqrgsfyafs yyydravdtd midyekggvl kvedferkar
      361 evcdnlenft sgspflcmdl tyitallkdg fgfasstvlq ltkkvnniet gwalgatfhl
      421 lqslgish
//
LOCUS       XP_061012650             416 aa            linear   MAM 02-DEC-2023
DEFINITION  nucleoside diphosphate phosphatase ENTPD5 isoform X2 [Dama dama].
ACCESSION   XP_061012650
VERSION     XP_061012650.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156667.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..416
                     /product="nucleoside diphosphate phosphatase ENTPD5
                     isoform X2"
                     /calculated_mol_wt=45952
     Region          47..409
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
     CDS             1..416
                     /gene="ENTPD5"
                     /coded_by="XM_061156667.1:285..1535"
                     /db_xref="GeneID:133066030"
ORIGIN      
        1 maisqgaaff mlvascvcst vfhreqqtwf egvflssmcp vnvsagtlyg imfdagstgt
       61 rihvytfvqk ipgqlpvleg eifdsvkpgl safvdqpkqg aesvqellev akdsippshw
      121 krtpvvlkat aglrllpeek aeallfevke ifkkspflvp ddsvsimdgs yegqlhghnq
      181 etvgtldlgg astqitflpq fektleqtpr gyltsfemfn styklythsy lgfglkaarl
      241 atlgaleteg idghtfrsac lprwleaewi fggvkyqygg nqegevgfep cyaevlrvvq
      301 gklhqpdevq rgsfyafsyy ydravdtdmi dyekggvlkv edferkarev cdnlenftsg
      361 spflcmdlty itallkdgfg fasstvlqlt kkvnnietgw algatfhllq slgish
//
LOCUS       XP_061012652             361 aa            linear   MAM 02-DEC-2023
DEFINITION  visual system homeobox 2 [Dama dama].
ACCESSION   XP_061012652
VERSION     XP_061012652.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156669.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..361
                     /product="visual system homeobox 2"
                     /calculated_mol_wt=39123
     Region          153..205
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..361
                     /gene="VSX2"
                     /coded_by="XM_061156669.1:1..1086"
                     /db_xref="GeneID:133066031"
ORIGIN      
        1 mtgkageals kpkaetvaks tsggaparct gfgiqeilgl nkeppsshpr atldglapgh
       61 llaarsvlsp agvggmgllg pgglpgfyaq ptflevlsdp qsvhlqplgr asgpldtsqt
      121 assdsedvss sdrkmsksal nqtkkrkkrr hrtiftsyql eelekafnea hypdvyarem
      181 lamktelped riqvwfqnrr akwrkrekcw grssvmaeyg lygamvrhsi plpesilksa
      241 kdgimdscap wllgmhkksl eaaaesgrkp eaerqalpkl dktepeergs eppaamsqee
      301 lrensiaalr araqqhstkv lgtvsgpdgl arsaeepere eaadqdrpae rlsparledv
      361 a
//
LOCUS       XP_061012653             184 aa            linear   MAM 02-DEC-2023
DEFINITION  protein lin-52 homolog isoform X1 [Dama dama].
ACCESSION   XP_061012653
VERSION     XP_061012653.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156670.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..184
                     /product="protein lin-52 homolog isoform X1"
                     /calculated_mol_wt=20641
     Region          55..135
                     /region_name="LIN52"
                     /note="Retinal tissue protein; pfam10044"
                     /db_xref="CDD:462950"
     CDS             1..184
                     /gene="LIN52"
                     /coded_by="XM_061156670.1:255..809"
                     /db_xref="GeneID:133066032"
ORIGIN      
        1 mgagrrtrll glrveflfgg vaygsklsrr rlatsrdmgw kmasptdgad leasllsfek
       61 ldraspdlwp eqlpgvaefa asfkspitss ppkwmaeier ddidmlkelg slttanlmek
      121 vrglqnlayq lgldeliing ceswtikkae hrridafelw cwrrlespld ykeikpvnpk
      181 gnqs
//
LOCUS       XP_061012654             178 aa            linear   MAM 02-DEC-2023
DEFINITION  protein lin-52 homolog isoform X2 [Dama dama].
ACCESSION   XP_061012654
VERSION     XP_061012654.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156671.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..178
                     /product="protein lin-52 homolog isoform X2"
                     /calculated_mol_wt=19575
     Region          55..135
                     /region_name="LIN52"
                     /note="Retinal tissue protein; pfam10044"
                     /db_xref="CDD:462950"
     CDS             1..178
                     /gene="LIN52"
                     /coded_by="XM_061156671.1:255..791"
                     /db_xref="GeneID:133066032"
ORIGIN      
        1 mgagrrtrll glrveflfgg vaygsklsrr rlatsrdmgw kmasptdgad leasllsfek
       61 ldraspdlwp eqlpgvaefa asfkspitss ppkwmaeier ddidmlkelg slttanlmek
      121 vrglqnlayq lgldewelpd pginmgspaf radslpaelp qkpcrilhsf enertiav
//
LOCUS       XP_061012655             178 aa            linear   MAM 02-DEC-2023
DEFINITION  protein lin-52 homolog isoform X2 [Dama dama].
ACCESSION   XP_061012655
VERSION     XP_061012655.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156672.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..178
                     /product="protein lin-52 homolog isoform X2"
                     /calculated_mol_wt=19575
     Region          55..135
                     /region_name="LIN52"
                     /note="Retinal tissue protein; pfam10044"
                     /db_xref="CDD:462950"
     CDS             1..178
                     /gene="LIN52"
                     /coded_by="XM_061156672.1:255..791"
                     /db_xref="GeneID:133066032"
ORIGIN      
        1 mgagrrtrll glrveflfgg vaygsklsrr rlatsrdmgw kmasptdgad leasllsfek
       61 ldraspdlwp eqlpgvaefa asfkspitss ppkwmaeier ddidmlkelg slttanlmek
      121 vrglqnlayq lgldewelpd pginmgspaf radslpaelp qkpcrilhsf enertiav
//
LOCUS       XP_061012656             170 aa            linear   MAM 02-DEC-2023
DEFINITION  protein lin-52 homolog isoform X3 [Dama dama].
ACCESSION   XP_061012656
VERSION     XP_061012656.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156673.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..170
                     /product="protein lin-52 homolog isoform X3"
                     /calculated_mol_wt=18636
     Region          55..135
                     /region_name="LIN52"
                     /note="Retinal tissue protein; pfam10044"
                     /db_xref="CDD:462950"
     CDS             1..170
                     /gene="LIN52"
                     /coded_by="XM_061156673.1:254..766"
                     /db_xref="GeneID:133066032"
ORIGIN      
        1 mgagrrtrll glrveflfgg vaygsklsrr rlatsrdmgw kmasptdgad leasllsfek
       61 ldraspdlwp eqlpgvaefa asfkspitss ppkwmaeier ddidmlkelg slttanlmek
      121 vrglqnlayq lgldewdsss ipnwgtkilh aveqlspctt tedpsccned
//
LOCUS       XP_061012657             162 aa            linear   MAM 02-DEC-2023
DEFINITION  protein lin-52 homolog isoform X4 [Dama dama].
ACCESSION   XP_061012657
VERSION     XP_061012657.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156674.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..162
                     /product="protein lin-52 homolog isoform X4"
                     /calculated_mol_wt=17734
     Region          55..>120
                     /region_name="LIN52"
                     /note="Retinal tissue protein; pfam10044"
                     /db_xref="CDD:462950"
     CDS             1..162
                     /gene="LIN52"
                     /coded_by="XM_061156674.1:271..759"
                     /db_xref="GeneID:133066032"
ORIGIN      
        1 mgagrrtrll glrveflfgg vaygsklsrr rlatsrdmgw kmasptdgad leasllsfek
       61 ldraspdlwp eqlpgvaefa asfkspitss ppkwmaeier ddidmlkelg slttanlmek
      121 nsegkekile asredekagf iqrievkmss tlgtigtmss kf
//
LOCUS       XP_061012658             153 aa            linear   MAM 02-DEC-2023
DEFINITION  protein lin-52 homolog isoform X5 [Dama dama].
ACCESSION   XP_061012658
VERSION     XP_061012658.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156675.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..153
                     /product="protein lin-52 homolog isoform X5"
                     /calculated_mol_wt=16947
     Region          55..148
                     /region_name="LIN52"
                     /note="Retinal tissue protein; pfam10044"
                     /db_xref="CDD:462950"
     CDS             1..153
                     /gene="LIN52"
                     /coded_by="XM_061156675.1:236..697"
                     /db_xref="GeneID:133066032"
ORIGIN      
        1 mgagrrtrll glrveflfgg vaygsklsrr rlatsrdmgw kmasptdgad leasllsfek
       61 ldraspdlwp eqlpgvaefa asfkspitss ppkwmaeier ddidmlkelg slttanlmek
      121 vrglqnlayq lgldesremt rgkflnilek pkk
//
LOCUS       XP_061012659             149 aa            linear   MAM 02-DEC-2023
DEFINITION  protein lin-52 homolog isoform X6 [Dama dama].
ACCESSION   XP_061012659
VERSION     XP_061012659.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156676.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..149
                     /product="protein lin-52 homolog isoform X6"
                     /calculated_mol_wt=16349
     Region          55..135
                     /region_name="LIN52"
                     /note="Retinal tissue protein; pfam10044"
                     /db_xref="CDD:462950"
     CDS             1..149
                     /gene="LIN52"
                     /coded_by="XM_061156676.1:248..697"
                     /db_xref="GeneID:133066032"
ORIGIN      
        1 mgagrrtrll glrveflfgg vaygsklsrr rlatsrdmgw kmasptdgad leasllsfek
       61 ldraspdlwp eqlpgvaefa asfkspitss ppkwmaeier ddidmlkelg slttanlmek
      121 vrglqnlayq lgldeyysst lgvdvyltp
//
LOCUS       XP_061012660             148 aa            linear   MAM 02-DEC-2023
DEFINITION  protein lin-52 homolog isoform X7 [Dama dama].
ACCESSION   XP_061012660
VERSION     XP_061012660.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156677.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..148
                     /product="protein lin-52 homolog isoform X7"
                     /calculated_mol_wt=16232
     Region          55..135
                     /region_name="LIN52"
                     /note="Retinal tissue protein; pfam10044"
                     /db_xref="CDD:462950"
     CDS             1..148
                     /gene="LIN52"
                     /coded_by="XM_061156677.1:247..693"
                     /db_xref="GeneID:133066032"
ORIGIN      
        1 mgagrrtrll glrveflfgg vaygsklsrr rlatsrdmgw kmasptdgad leasllsfek
       61 ldraspdlwp eqlpgvaefa asfkspitss ppkwmaeier ddidmlkelg slttanlmek
      121 vrglqnlayq lgldewnlpd pgiepadh
//
LOCUS       XP_061012662             145 aa            linear   MAM 02-DEC-2023
DEFINITION  protein lin-52 homolog isoform X8 [Dama dama].
ACCESSION   XP_061012662
VERSION     XP_061012662.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156679.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..145
                     /product="protein lin-52 homolog isoform X8"
                     /calculated_mol_wt=16036
     Region          55..>121
                     /region_name="LIN52"
                     /note="Retinal tissue protein; pfam10044"
                     /db_xref="CDD:462950"
     CDS             1..145
                     /gene="LIN52"
                     /coded_by="XM_061156679.1:257..694"
                     /db_xref="GeneID:133066032"
ORIGIN      
        1 mgagrrtrll glrveflfgg vaygsklsrr rlatsrdmgw kmasptdgad leasllsfek
       61 ldraspdlwp eqlpgvaefa asfkspitss ppkwmaeier ddidmlkelg slttanlmek
      121 vvteqqaelp vlirqlptsc lfytw
//
LOCUS       XP_061012663             142 aa            linear   MAM 02-DEC-2023
DEFINITION  protein lin-52 homolog isoform X9 [Dama dama].
ACCESSION   XP_061012663
VERSION     XP_061012663.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156680.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..142
                     /product="protein lin-52 homolog isoform X9"
                     /calculated_mol_wt=15488
     Region          55..135
                     /region_name="LIN52"
                     /note="Retinal tissue protein; pfam10044"
                     /db_xref="CDD:462950"
     CDS             1..142
                     /gene="LIN52"
                     /coded_by="XM_061156680.1:246..674"
                     /db_xref="GeneID:133066032"
ORIGIN      
        1 mgagrrtrll glrveflfgg vaygsklsrr rlatsrdmgw kmasptdgad leasllsfek
       61 ldraspdlwp eqlpgvaefa asfkspitss ppkwmaeier ddidmlkelg slttanlmek
      121 vrglqnlayq lgldecchra ag
//
LOCUS       XP_061012664             142 aa            linear   MAM 02-DEC-2023
DEFINITION  protein lin-52 homolog isoform X10 [Dama dama].
ACCESSION   XP_061012664
VERSION     XP_061012664.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156681.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..142
                     /product="protein lin-52 homolog isoform X10"
                     /calculated_mol_wt=15477
     Region          55..>120
                     /region_name="LIN52"
                     /note="Retinal tissue protein; pfam10044"
                     /db_xref="CDD:462950"
     CDS             1..142
                     /gene="LIN52"
                     /coded_by="XM_061156681.1:256..684"
                     /db_xref="GeneID:133066032"
ORIGIN      
        1 mgagrrtrll glrveflfgg vaygsklsrr rlatsrdmgw kmasptdgad leasllsfek
       61 ldraspdlwp eqlpgvaefa asfkspitss ppkwmaeier ddidmlkelg slttanlmek
      121 gifqtqglnl qiteppgkps nh
//
LOCUS       XP_061012665             135 aa            linear   MAM 02-DEC-2023
DEFINITION  protein lin-52 homolog isoform X11 [Dama dama].
ACCESSION   XP_061012665
VERSION     XP_061012665.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156682.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..135
                     /product="protein lin-52 homolog isoform X11"
                     /calculated_mol_wt=14789
     Region          55..135
                     /region_name="LIN52"
                     /note="Retinal tissue protein; pfam10044"
                     /db_xref="CDD:462950"
     CDS             1..135
                     /gene="LIN52"
                     /coded_by="XM_061156682.1:243..650"
                     /db_xref="GeneID:133066032"
ORIGIN      
        1 mgagrrtrll glrveflfgg vaygsklsrr rlatsrdmgw kmasptdgad leasllsfek
       61 ldraspdlwp eqlpgvaefa asfkspitss ppkwmaeier ddidmlkelg slttanlmek
      121 vrglqnlayq lglde
//
LOCUS       XP_061012666             135 aa            linear   MAM 02-DEC-2023
DEFINITION  protein lin-52 homolog isoform X12 [Dama dama].
ACCESSION   XP_061012666
VERSION     XP_061012666.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156683.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..135
                     /product="protein lin-52 homolog isoform X12"
                     /calculated_mol_wt=14789
     Region          55..135
                     /region_name="LIN52"
                     /note="Retinal tissue protein; pfam10044"
                     /db_xref="CDD:462950"
     CDS             1..135
                     /gene="LIN52"
                     /coded_by="XM_061156683.1:243..650"
                     /db_xref="GeneID:133066032"
ORIGIN      
        1 mgagrrtrll glrveflfgg vaygsklsrr rlatsrdmgw kmasptdgad leasllsfek
       61 ldraspdlwp eqlpgvaefa asfkspitss ppkwmaeier ddidmlkelg slttanlmek
      121 vrglqnlayq lglde
//
LOCUS       XP_061012667             129 aa            linear   MAM 02-DEC-2023
DEFINITION  protein lin-52 homolog isoform X13 [Dama dama].
ACCESSION   XP_061012667
VERSION     XP_061012667.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156684.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..129
                     /product="protein lin-52 homolog isoform X13"
                     /calculated_mol_wt=14284
     Region          55..>120
                     /region_name="LIN52"
                     /note="Retinal tissue protein; pfam10044"
                     /db_xref="CDD:462950"
     CDS             1..129
                     /gene="LIN52"
                     /coded_by="XM_061156684.1:252..641"
                     /db_xref="GeneID:133066032"
ORIGIN      
        1 mgagrrtrll glrveflfgg vaygsklsrr rlatsrdmgw kmasptdgad leasllsfek
       61 ldraspdlwp eqlpgvaefa asfkspitss ppkwmaeier ddidmlkelg slttanlmek
      121 nmqwicphr
//
LOCUS       XP_061012668             125 aa            linear   MAM 02-DEC-2023
DEFINITION  protein lin-52 homolog isoform X14 [Dama dama].
ACCESSION   XP_061012668
VERSION     XP_061012668.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156685.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..125
                     /product="protein lin-52 homolog isoform X14"
                     /calculated_mol_wt=13871
     Region          55..120
                     /region_name="LIN52"
                     /note="Retinal tissue protein; pfam10044"
                     /db_xref="CDD:462950"
     CDS             1..125
                     /gene="LIN52"
                     /coded_by="XM_061156685.1:246..623"
                     /db_xref="GeneID:133066032"
ORIGIN      
        1 mgagrrtrll glrveflfgg vaygsklsrr rlatsrdmgw kmasptdgad leasllsfek
       61 ldraspdlwp eqlpgvaefa asfkspitss ppkwmaeier ddidmlkare mtrgkflnil
      121 ekpkk
//
LOCUS       XP_061012669             125 aa            linear   MAM 02-DEC-2023
DEFINITION  protein lin-52 homolog isoform X15 [Dama dama].
ACCESSION   XP_061012669
VERSION     XP_061012669.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156686.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..125
                     /product="protein lin-52 homolog isoform X15"
                     /calculated_mol_wt=13708
     Region          55..>124
                     /region_name="LIN52"
                     /note="Retinal tissue protein; pfam10044"
                     /db_xref="CDD:462950"
     CDS             1..125
                     /gene="LIN52"
                     /coded_by="XM_061156686.1:251..628"
                     /db_xref="GeneID:133066032"
ORIGIN      
        1 mgagrrtrll glrveflfgg vaygsklsrr rlatsrdmgw kmasptdgad leasllsfek
       61 ldraspdlwp eqlpgvaefa asfkspitss ppkwmaeier ddidmlkelg slttanlmek
      121 iihll
//
LOCUS       XP_061012670             123 aa            linear   MAM 02-DEC-2023
DEFINITION  protein lin-52 homolog isoform X16 [Dama dama].
ACCESSION   XP_061012670
VERSION     XP_061012670.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156687.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..123
                     /product="protein lin-52 homolog isoform X16"
                     /calculated_mol_wt=13501
     Region          55..>120
                     /region_name="LIN52"
                     /note="Retinal tissue protein; pfam10044"
                     /db_xref="CDD:462950"
     CDS             1..123
                     /gene="LIN52"
                     /coded_by="XM_061156687.1:249..620"
                     /db_xref="GeneID:133066032"
ORIGIN      
        1 mgagrrtrll glrveflfgg vaygsklsrr rlatsrdmgw kmasptdgad leasllsfek
       61 ldraspdlwp eqlpgvaefa asfkspitss ppkwmaeier ddidmlkelg slttanlmek
      121 per
//
LOCUS       XP_061012672             649 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM161B [Dama dama].
ACCESSION   XP_061012672
VERSION     XP_061012672.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156689.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..649
                     /product="protein FAM161B"
                     /calculated_mol_wt=73959
     Region          167..537
                     /region_name="UPF0564"
                     /note="Uncharacterized protein family UPF0564; pfam10595"
                     /db_xref="CDD:431382"
     CDS             1..649
                     /gene="FAM161B"
                     /coded_by="XM_061156689.1:101..2050"
                     /db_xref="GeneID:133066033"
ORIGIN      
        1 mtvgrsagas ggaqwshqif spksssdtda deelhgdglv lprasklsef lgpeeetdst
       61 sdstgsffet lqalrqkdrr cwleslypsd pdsdeslsee dedperflqd kgrgkpqvqy
      121 ppssrcgsvr rcsswgtlps rtpkahpqpp sgfrppsqhr sisswassit vpqpfrmtlr
      181 earkkaqwla spasfeperr qaekqgqeea echrqfraqp vpahvylply qevmernear
      241 rragiqkrke lllsslkpfs flekeeqrkq aalqrhlaat aatakvpkqk atrripksil
      301 epalgdklqe aellrkirih mraldtlqka sspiapsssq adrqprtatr treeklgflh
      361 tdfgfqprvn paipdyeely kafqkqaakr rdtreatrnk pfllrtasrc htrrpcdvaa
      421 segrkespep patrlsrsrs lnglaslsan tlpvhitdat rkresavrcs lekkdkades
      481 tqwlemhkkk cqaisksvtl rakamdphks leevfkaklk enrnndrkra keykkeleem
      541 keriqrrpyl feqvtkdlar kkaeqryrdt lkqagldedf vrnkgqgsra lqwkeqwevg
      601 dcpsthettk vgirnpqqdl eesleqissp mkeleelsye lpdnlrtla
//
LOCUS       XP_061012673             478 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 410 isoform X1 [Dama dama].
ACCESSION   XP_061012673
VERSION     XP_061012673.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156690.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..478
                     /product="zinc finger protein 410 isoform X1"
                     /calculated_mol_wt=51821
     Region          <99..364
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          251..273
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Region          265..292
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          281..303
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(288,290,292,294..295,298..299,302,318,320,324..325,
                     328..329,332,346,348,350,352..353,356..357,360)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          295..321
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          311..333
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(311,316,329,333)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          325..350
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          341..361
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..478
                     /gene="ZNF410"
                     /coded_by="XM_061156690.1:432..1868"
                     /db_xref="GeneID:133066034"
ORIGIN      
        1 mlsdeleskp ellvqfvqnt siplgqglve seakditcls llpvteasec srlmlpddtp
       61 nhtnsskevp ssavlrslqv nvgpdgeetr aqtvqkspef lstpespsll qdlqpsdsts
      121 fillnltrag lgssaehlvf vqdeaedsgn dflssestds sipwflrvqe lahdsliaat
      181 raqlaknakt ssngenvhlg sgdgqpkdsg plpqmekklk ctvegcdrtf vwpahfkyhl
      241 kthrndrsfi cpaagcgksf yvlqrlkvhm rthngekpfv cpesncgkqf ttagnlknhl
      301 rihtgekpfl ceaqgcgrsf aeysslrkhl vvhsgekphq cqvcgktfsq sgsrnvhmrk
      361 hhlqagaags qeqepaaepl mgsslleeas vtsknlvsmn sqpslggesl nlpntnsilg
      421 vddevlaegs prplssvpdv thhlvtmqsg rqsyevsvlt avnpqellnq gdlterrt
//
LOCUS       XP_061012674             478 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 410 isoform X1 [Dama dama].
ACCESSION   XP_061012674
VERSION     XP_061012674.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156691.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..478
                     /product="zinc finger protein 410 isoform X1"
                     /calculated_mol_wt=51821
     Region          <99..364
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          251..273
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Region          265..292
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          281..303
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(288,290,292,294..295,298..299,302,318,320,324..325,
                     328..329,332,346,348,350,352..353,356..357,360)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          295..321
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          311..333
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(311,316,329,333)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          325..350
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          341..361
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..478
                     /gene="ZNF410"
                     /coded_by="XM_061156691.1:530..1966"
                     /db_xref="GeneID:133066034"
ORIGIN      
        1 mlsdeleskp ellvqfvqnt siplgqglve seakditcls llpvteasec srlmlpddtp
       61 nhtnsskevp ssavlrslqv nvgpdgeetr aqtvqkspef lstpespsll qdlqpsdsts
      121 fillnltrag lgssaehlvf vqdeaedsgn dflssestds sipwflrvqe lahdsliaat
      181 raqlaknakt ssngenvhlg sgdgqpkdsg plpqmekklk ctvegcdrtf vwpahfkyhl
      241 kthrndrsfi cpaagcgksf yvlqrlkvhm rthngekpfv cpesncgkqf ttagnlknhl
      301 rihtgekpfl ceaqgcgrsf aeysslrkhl vvhsgekphq cqvcgktfsq sgsrnvhmrk
      361 hhlqagaags qeqepaaepl mgsslleeas vtsknlvsmn sqpslggesl nlpntnsilg
      421 vddevlaegs prplssvpdv thhlvtmqsg rqsyevsvlt avnpqellnq gdlterrt
//
LOCUS       XP_061012675             471 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 410 isoform X2 [Dama dama].
ACCESSION   XP_061012675
VERSION     XP_061012675.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156692.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..471
                     /product="zinc finger protein 410 isoform X2"
                     /calculated_mol_wt=50975
     Region          <99..364
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          251..273
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Region          265..292
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          281..303
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(288,290,292,294..295,298..299,302,318,320,324..325,
                     328..329,332,346,348,350,352..353,356..357,360)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          295..321
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          311..333
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(311,316,329,333)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          325..350
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          341..361
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..471
                     /gene="ZNF410"
                     /coded_by="XM_061156692.1:433..1848"
                     /db_xref="GeneID:133066034"
ORIGIN      
        1 mlsdeleskp ellvqfvqnt siplgqglve seakditcls llpvteasec srlmlpddtp
       61 nhtnsskevp ssavlrslqv nvgpdgeetr aqtvqkspef lstpespsll qdlqpsdsts
      121 fillnltrag lgssaehlvf vqdeaedsgn dflssestds sipwflrvqe lahdsliaat
      181 raqlaknakt ssngenvhlg sgdgqpkdsg plpqmekklk ctvegcdrtf vwpahfkyhl
      241 kthrndrsfi cpaagcgksf yvlqrlkvhm rthngekpfv cpesncgkqf ttagnlknhl
      301 rihtgekpfl ceaqgcgrsf aeysslrkhl vvhsgekphq cqvcgktfsq sgsrnvhmrk
      361 hhlqagaags qeqepaaepl mgsslleeas vtsknlvsmn sqpslggesl nlpntnsilg
      421 vddevlaegs prplssvpdv thhlvtmqsg rqsyevsvlt avnpqedill p
//
LOCUS       XP_061012676             431 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 410 isoform X3 [Dama dama].
ACCESSION   XP_061012676
VERSION     XP_061012676.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156693.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..431
                     /product="zinc finger protein 410 isoform X3"
                     /calculated_mol_wt=47022
     Region          <189..299
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     Region          245..>326
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          256..273
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Region          265..292
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          281..303
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(288,290,292,294..295,298..299,302,318,320,324..325,
                     328..329,332,346,348,350,352..353,356..357,360)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          311..333
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(311,316,329,333)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          325..350
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          341..361
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..431
                     /gene="ZNF410"
                     /coded_by="XM_061156693.1:431..1726"
                     /db_xref="GeneID:133066034"
ORIGIN      
        1 mlsdeleskp ellvqfvqnt siplgqglve seakditcls llpvteasec srlmlpddtp
       61 nhtnsskevp ssavlrslqv nvgpdgeetr aqtvqkspef lstpespsll qdlqpsdsts
      121 fillnltrag lgssaehlvf vqdeaedsgn dflssestds sipwflrvqe lahdsliaat
      181 raqlaknakt ssngenvhlg sgdgqpkdsg plpqmekklk ctvegcdrtf vwpahfkyhl
      241 kthrndrsfi cpaagcgksf yvlqrlkvhm rthngekpfv cpesncgkqf ttagnlknhl
      301 rihtgekpfl ceaqgcgrsf aeysslrkhl vvhsgekphq cqvcgktfsq sgsrnvhmrk
      361 hhlqagaags qeqepaevla egsprplssv pdvthhlvtm qsgrqsyevs vltavnpqel
      421 lnqgdlterr t
//
LOCUS       XP_061012677             424 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 410 isoform X4 [Dama dama].
ACCESSION   XP_061012677
VERSION     XP_061012677.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156694.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..424
                     /product="zinc finger protein 410 isoform X4"
                     /calculated_mol_wt=46176
     Region          <189..299
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     Region          245..>316
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          256..273
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Region          265..292
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          281..303
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(288,290,292,294..295,298..299,302,318,320,324..325,
                     328..329,332,346,348,350,352..353,356..357,360)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          311..333
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(311,316,329,333)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          325..350
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          341..361
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..424
                     /gene="ZNF410"
                     /coded_by="XM_061156694.1:432..1706"
                     /db_xref="GeneID:133066034"
ORIGIN      
        1 mlsdeleskp ellvqfvqnt siplgqglve seakditcls llpvteasec srlmlpddtp
       61 nhtnsskevp ssavlrslqv nvgpdgeetr aqtvqkspef lstpespsll qdlqpsdsts
      121 fillnltrag lgssaehlvf vqdeaedsgn dflssestds sipwflrvqe lahdsliaat
      181 raqlaknakt ssngenvhlg sgdgqpkdsg plpqmekklk ctvegcdrtf vwpahfkyhl
      241 kthrndrsfi cpaagcgksf yvlqrlkvhm rthngekpfv cpesncgkqf ttagnlknhl
      301 rihtgekpfl ceaqgcgrsf aeysslrkhl vvhsgekphq cqvcgktfsq sgsrnvhmrk
      361 hhlqagaags qeqepaevla egsprplssv pdvthhlvtm qsgrqsyevs vltavnpqed
      421 illp
//
LOCUS       XP_061012678             351 aa            linear   MAM 02-DEC-2023
DEFINITION  prostaglandin reductase 2 [Dama dama].
ACCESSION   XP_061012678
VERSION     XP_061012678.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156695.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..351
                     /product="prostaglandin reductase 2"
                     /calculated_mol_wt=38145
     Region          1..345
                     /region_name="PTGR2"
                     /note="Prostaglandin reductase; cd08293"
                     /db_xref="CDD:176253"
     Site            order(50,139,165..167,187..188,192,208,231..232,253..257,
                     259,287..289,332..333,335,337,339)
                     /site_type="other"
                     /note="NADP binding site [chemical binding]"
                     /db_xref="CDD:176253"
     Site            order(51,65,99..100,290)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:176253"
     CDS             1..351
                     /gene="PTGR2"
                     /coded_by="XM_061156695.1:137..1192"
                     /db_xref="GeneID:133066035"
ORIGIN      
        1 mivqrvvlns rpgknghpva enfrveevnl pdcvnegqvq vrtlylsvdp ymrcrmnedt
       61 gsdyitpwql sqvvdgggvg iieeskhpnf tkgdfvtsfy wpwqtkvild gnilekvdsq
      121 lvnghlsyfl gaigmpglts ligvqekghi tagsnqtmvv sgaagacgsl agqighllgc
      181 srvvgicgtp ekclfltsel gfdaainyke gnvaeqlhkl cpagvdvyfd nvggdisdtv
      241 isqmnqnshi ilcgqisqyn kdvpyppplp paieaiqker nitrerflvl nykdkfesgi
      301 lqlsqwfkeg klkiketmin glenmgaafq smmtggnigk qivcisgdts l
//
LOCUS       XP_061012679             421 aa            linear   MAM 02-DEC-2023
DEFINITION  acyl-coenzyme A thioesterase 6 isoform X1 [Dama dama].
ACCESSION   XP_061012679
VERSION     XP_061012679.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156696.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..421
                     /product="acyl-coenzyme A thioesterase 6 isoform X1"
                     /calculated_mol_wt=46304
     Region          16..140
                     /region_name="Bile_Hydr_Trans"
                     /note="Acyl-CoA thioester hydrolase/BAAT N-terminal
                     region; pfam04775"
                     /db_xref="CDD:461422"
     Region          205..412
                     /region_name="BAAT_C"
                     /note="BAAT / Acyl-CoA thioester hydrolase C terminal;
                     pfam08840"
                     /db_xref="CDD:430252"
     CDS             1..421
                     /gene="ACOT6"
                     /coded_by="XM_061156696.1:187..1452"
                     /db_xref="GeneID:133066037"
ORIGIN      
        1 mavtvtlepa grcrwdepvr ivvrglapgq pvtlcaalrd ergalfraha rycadaagll
       61 dlerapalgg sftglepmgl fwalepekpl lrlvkrdvqt pfavelevld ghepgtqlll
      121 gravherdfl apgvrrepvr agrvraslfl ppgskpfpgi ldlfgssggl ceyrasllag
      181 hgfavlalay frfedlpehl ndvcleyfee avdfmlqhpk vkgpgvgllg fskggdlcls
      241 masflkgita tvvinacvan tiaplrykdm iipelsydlk khtitesgfl nfvdiwenpl
      301 ektnhqslip lekaqgpflf ivsmddhnwk sevyariase rlqahgkdrp qiiyypgsgh
      361 cidppyfpls rasvhavlgq pvfyggepka hskaqadawq qiqtffhkhl ngkksvrpsk
      421 l
//
LOCUS       XP_061012680             207 aa            linear   MAM 02-DEC-2023
DEFINITION  acyl-coenzyme A thioesterase 6 isoform X2 [Dama dama].
ACCESSION   XP_061012680
VERSION     XP_061012680.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156697.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..207
                     /product="acyl-coenzyme A thioesterase 6 isoform X2"
                     /calculated_mol_wt=22904
     Region          1..198
                     /region_name="BAAT_C"
                     /note="BAAT / Acyl-CoA thioester hydrolase C terminal;
                     pfam08840"
                     /db_xref="CDD:430252"
     CDS             1..207
                     /gene="ACOT6"
                     /coded_by="XM_061156697.1:116..739"
                     /db_xref="GeneID:133066037"
ORIGIN      
        1 mlqhpkvkgp gvgllgfskg gdlclsmasf lkgitatvvi nacvantiap lrykdmiipe
       61 lsydlkkhti tesgflnfvd iwenplektn hqslipleka qgpflfivsm ddhnwksevy
      121 ariaserlqa hgkdrpqiiy ypgsghcidp pyfplsrasv havlgqpvfy ggepkahska
      181 qadawqqiqt ffhkhlngkk svrpskl
//
LOCUS       XP_061012681            1099 aa            linear   MAM 02-DEC-2023
DEFINITION  mitotic deacetylase-associated SANT domain protein isoform X1 [Dama
            dama].
ACCESSION   XP_061012681
VERSION     XP_061012681.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156698.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1099
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1099
                     /product="mitotic deacetylase-associated SANT domain
                     protein isoform X1"
                     /calculated_mol_wt=120250
     Region          <289..700
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          719..774
                     /region_name="ELM2"
                     /note="ELM2 domain; pfam01448"
                     /db_xref="CDD:460214"
     Region          828..872
                     /region_name="SANT"
                     /note="'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains.
                     Tandem copies of the domain bind telomeric DNA tandem
                     repeatsas part of the capping complex. Binding is sequence
                     dependent for repeats which contain the G/C rich motif
                     [C2-3 A (CA)1-6]. The domain is...; cl21498"
                     /db_xref="CDD:473887"
     Site            order(829,858..859,861..862,864..866,868..870)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212559"
     CDS             1..1099
                     /gene="MIDEAS"
                     /coded_by="XM_061156698.1:732..4031"
                     /db_xref="GeneID:133066039"
ORIGIN      
        1 mnlqaqpkaq nkrkrclfgd qepapkeqpq plqapqqapa ppqsrvkeep yfahegpaga
       61 aahsqpvelp psnslallns vvygsertml sqqvgsvkwp nsvmapgrgp ergggggvsd
      121 sgwqqqpgqp pphstwnrhs lplysgpkgs phpgmgvsty ynhpeplkre kgggpqldry
      181 gnavrpmvpp kvqlevgrpq aplnsfhvak kppnqtlplq pfqlafghqv nrqvfrqgpp
      241 ppnpvgafpp qkqqqqqqaa lpqmqlfenf ysmqqpppsq qpqdfglqpa gplgqshlah
      301 hsmapypfpp npdmnpelrk allqesapqp vlpqaqiafp rrsrrlskeg vlpstaldga
      361 gtqpgqepas nlflhhwapq qpppgslgqp hpealgfple lresqllsdg erlapngrer
      421 eapamggeeg mravgtgdcg qvlrsgviqs trrrrrasqe anlltlaqka velaslqnak
      481 dangseekrk svlasttkcg vefsepslak raredsgmvp liipvsvpvr avdpteaaqa
      541 ggvdedgkgp eqnpaehkps vivtrrrstr ipgtdapaqa edmnvklege psvrkpkqrp
      601 rpepliiptk agtfiappvy snitpyqshl rspvrladhp sersfelppy tpppilspvr
      661 egsglyfnai mstssipapp pitpksahrt llrsnsaevt ppvlsvmgea tpvsieprin
      721 vgsrfqaeip smrdralaaa dphkadlvwq pwevlessre kqrqvedllt aacssifpga
      781 gtnqelalhc lhesrgdile tlnklllkkp lrphnhplat yhytgsdqwk maerklfnkg
      841 iaiykkdffl vqkliqtktv aqcvefyyty kkqvkigrng tltfgdvdts deksaqeeve
      901 vdiktsqkfp rvppprresp seerlepkke eketrkegee empetqdkge qeegrersrr
      961 aaavkatqtl qanesandil ilrshesnap gsaggqasek pregpgksrr alpfsekkkk
     1021 ietfnktqnq entfpckkcg rvffkvksrs ahmkshaeqe kkaaalrqke keaaaaaata
     1081 aasphqpalr eesgagerg
//
LOCUS       XP_061012682            1099 aa            linear   MAM 02-DEC-2023
DEFINITION  mitotic deacetylase-associated SANT domain protein isoform X1 [Dama
            dama].
ACCESSION   XP_061012682
VERSION     XP_061012682.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156699.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1099
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1099
                     /product="mitotic deacetylase-associated SANT domain
                     protein isoform X1"
                     /calculated_mol_wt=120250
     Region          <289..700
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          719..774
                     /region_name="ELM2"
                     /note="ELM2 domain; pfam01448"
                     /db_xref="CDD:460214"
     Region          828..872
                     /region_name="SANT"
                     /note="'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains.
                     Tandem copies of the domain bind telomeric DNA tandem
                     repeatsas part of the capping complex. Binding is sequence
                     dependent for repeats which contain the G/C rich motif
                     [C2-3 A (CA)1-6]. The domain is...; cl21498"
                     /db_xref="CDD:473887"
     Site            order(829,858..859,861..862,864..866,868..870)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212559"
     CDS             1..1099
                     /gene="MIDEAS"
                     /coded_by="XM_061156699.1:393..3692"
                     /db_xref="GeneID:133066039"
ORIGIN      
        1 mnlqaqpkaq nkrkrclfgd qepapkeqpq plqapqqapa ppqsrvkeep yfahegpaga
       61 aahsqpvelp psnslallns vvygsertml sqqvgsvkwp nsvmapgrgp ergggggvsd
      121 sgwqqqpgqp pphstwnrhs lplysgpkgs phpgmgvsty ynhpeplkre kgggpqldry
      181 gnavrpmvpp kvqlevgrpq aplnsfhvak kppnqtlplq pfqlafghqv nrqvfrqgpp
      241 ppnpvgafpp qkqqqqqqaa lpqmqlfenf ysmqqpppsq qpqdfglqpa gplgqshlah
      301 hsmapypfpp npdmnpelrk allqesapqp vlpqaqiafp rrsrrlskeg vlpstaldga
      361 gtqpgqepas nlflhhwapq qpppgslgqp hpealgfple lresqllsdg erlapngrer
      421 eapamggeeg mravgtgdcg qvlrsgviqs trrrrrasqe anlltlaqka velaslqnak
      481 dangseekrk svlasttkcg vefsepslak raredsgmvp liipvsvpvr avdpteaaqa
      541 ggvdedgkgp eqnpaehkps vivtrrrstr ipgtdapaqa edmnvklege psvrkpkqrp
      601 rpepliiptk agtfiappvy snitpyqshl rspvrladhp sersfelppy tpppilspvr
      661 egsglyfnai mstssipapp pitpksahrt llrsnsaevt ppvlsvmgea tpvsieprin
      721 vgsrfqaeip smrdralaaa dphkadlvwq pwevlessre kqrqvedllt aacssifpga
      781 gtnqelalhc lhesrgdile tlnklllkkp lrphnhplat yhytgsdqwk maerklfnkg
      841 iaiykkdffl vqkliqtktv aqcvefyyty kkqvkigrng tltfgdvdts deksaqeeve
      901 vdiktsqkfp rvppprresp seerlepkke eketrkegee empetqdkge qeegrersrr
      961 aaavkatqtl qanesandil ilrshesnap gsaggqasek pregpgksrr alpfsekkkk
     1021 ietfnktqnq entfpckkcg rvffkvksrs ahmkshaeqe kkaaalrqke keaaaaaata
     1081 aasphqpalr eesgagerg
//
LOCUS       XP_061012683            1099 aa            linear   MAM 02-DEC-2023
DEFINITION  mitotic deacetylase-associated SANT domain protein isoform X1 [Dama
            dama].
ACCESSION   XP_061012683
VERSION     XP_061012683.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156700.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1099
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1099
                     /product="mitotic deacetylase-associated SANT domain
                     protein isoform X1"
                     /calculated_mol_wt=120250
     Region          <289..700
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          719..774
                     /region_name="ELM2"
                     /note="ELM2 domain; pfam01448"
                     /db_xref="CDD:460214"
     Region          828..872
                     /region_name="SANT"
                     /note="'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains.
                     Tandem copies of the domain bind telomeric DNA tandem
                     repeatsas part of the capping complex. Binding is sequence
                     dependent for repeats which contain the G/C rich motif
                     [C2-3 A (CA)1-6]. The domain is...; cl21498"
                     /db_xref="CDD:473887"
     Site            order(829,858..859,861..862,864..866,868..870)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212559"
     CDS             1..1099
                     /gene="MIDEAS"
                     /coded_by="XM_061156700.1:586..3885"
                     /db_xref="GeneID:133066039"
ORIGIN      
        1 mnlqaqpkaq nkrkrclfgd qepapkeqpq plqapqqapa ppqsrvkeep yfahegpaga
       61 aahsqpvelp psnslallns vvygsertml sqqvgsvkwp nsvmapgrgp ergggggvsd
      121 sgwqqqpgqp pphstwnrhs lplysgpkgs phpgmgvsty ynhpeplkre kgggpqldry
      181 gnavrpmvpp kvqlevgrpq aplnsfhvak kppnqtlplq pfqlafghqv nrqvfrqgpp
      241 ppnpvgafpp qkqqqqqqaa lpqmqlfenf ysmqqpppsq qpqdfglqpa gplgqshlah
      301 hsmapypfpp npdmnpelrk allqesapqp vlpqaqiafp rrsrrlskeg vlpstaldga
      361 gtqpgqepas nlflhhwapq qpppgslgqp hpealgfple lresqllsdg erlapngrer
      421 eapamggeeg mravgtgdcg qvlrsgviqs trrrrrasqe anlltlaqka velaslqnak
      481 dangseekrk svlasttkcg vefsepslak raredsgmvp liipvsvpvr avdpteaaqa
      541 ggvdedgkgp eqnpaehkps vivtrrrstr ipgtdapaqa edmnvklege psvrkpkqrp
      601 rpepliiptk agtfiappvy snitpyqshl rspvrladhp sersfelppy tpppilspvr
      661 egsglyfnai mstssipapp pitpksahrt llrsnsaevt ppvlsvmgea tpvsieprin
      721 vgsrfqaeip smrdralaaa dphkadlvwq pwevlessre kqrqvedllt aacssifpga
      781 gtnqelalhc lhesrgdile tlnklllkkp lrphnhplat yhytgsdqwk maerklfnkg
      841 iaiykkdffl vqkliqtktv aqcvefyyty kkqvkigrng tltfgdvdts deksaqeeve
      901 vdiktsqkfp rvppprresp seerlepkke eketrkegee empetqdkge qeegrersrr
      961 aaavkatqtl qanesandil ilrshesnap gsaggqasek pregpgksrr alpfsekkkk
     1021 ietfnktqnq entfpckkcg rvffkvksrs ahmkshaeqe kkaaalrqke keaaaaaata
     1081 aasphqpalr eesgagerg
//
LOCUS       XP_061012685            1099 aa            linear   MAM 02-DEC-2023
DEFINITION  mitotic deacetylase-associated SANT domain protein isoform X1 [Dama
            dama].
ACCESSION   XP_061012685
VERSION     XP_061012685.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156702.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1099
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1099
                     /product="mitotic deacetylase-associated SANT domain
                     protein isoform X1"
                     /calculated_mol_wt=120250
     Region          <289..700
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          719..774
                     /region_name="ELM2"
                     /note="ELM2 domain; pfam01448"
                     /db_xref="CDD:460214"
     Region          828..872
                     /region_name="SANT"
                     /note="'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains.
                     Tandem copies of the domain bind telomeric DNA tandem
                     repeatsas part of the capping complex. Binding is sequence
                     dependent for repeats which contain the G/C rich motif
                     [C2-3 A (CA)1-6]. The domain is...; cl21498"
                     /db_xref="CDD:473887"
     Site            order(829,858..859,861..862,864..866,868..870)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212559"
     CDS             1..1099
                     /gene="MIDEAS"
                     /coded_by="XM_061156702.1:496..3795"
                     /db_xref="GeneID:133066039"
ORIGIN      
        1 mnlqaqpkaq nkrkrclfgd qepapkeqpq plqapqqapa ppqsrvkeep yfahegpaga
       61 aahsqpvelp psnslallns vvygsertml sqqvgsvkwp nsvmapgrgp ergggggvsd
      121 sgwqqqpgqp pphstwnrhs lplysgpkgs phpgmgvsty ynhpeplkre kgggpqldry
      181 gnavrpmvpp kvqlevgrpq aplnsfhvak kppnqtlplq pfqlafghqv nrqvfrqgpp
      241 ppnpvgafpp qkqqqqqqaa lpqmqlfenf ysmqqpppsq qpqdfglqpa gplgqshlah
      301 hsmapypfpp npdmnpelrk allqesapqp vlpqaqiafp rrsrrlskeg vlpstaldga
      361 gtqpgqepas nlflhhwapq qpppgslgqp hpealgfple lresqllsdg erlapngrer
      421 eapamggeeg mravgtgdcg qvlrsgviqs trrrrrasqe anlltlaqka velaslqnak
      481 dangseekrk svlasttkcg vefsepslak raredsgmvp liipvsvpvr avdpteaaqa
      541 ggvdedgkgp eqnpaehkps vivtrrrstr ipgtdapaqa edmnvklege psvrkpkqrp
      601 rpepliiptk agtfiappvy snitpyqshl rspvrladhp sersfelppy tpppilspvr
      661 egsglyfnai mstssipapp pitpksahrt llrsnsaevt ppvlsvmgea tpvsieprin
      721 vgsrfqaeip smrdralaaa dphkadlvwq pwevlessre kqrqvedllt aacssifpga
      781 gtnqelalhc lhesrgdile tlnklllkkp lrphnhplat yhytgsdqwk maerklfnkg
      841 iaiykkdffl vqkliqtktv aqcvefyyty kkqvkigrng tltfgdvdts deksaqeeve
      901 vdiktsqkfp rvppprresp seerlepkke eketrkegee empetqdkge qeegrersrr
      961 aaavkatqtl qanesandil ilrshesnap gsaggqasek pregpgksrr alpfsekkkk
     1021 ietfnktqnq entfpckkcg rvffkvksrs ahmkshaeqe kkaaalrqke keaaaaaata
     1081 aasphqpalr eesgagerg
//
LOCUS       XP_061012686            1041 aa            linear   MAM 02-DEC-2023
DEFINITION  mitotic deacetylase-associated SANT domain protein isoform X2 [Dama
            dama].
ACCESSION   XP_061012686
VERSION     XP_061012686.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156703.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1041
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1041
                     /product="mitotic deacetylase-associated SANT domain
                     protein isoform X2"
                     /calculated_mol_wt=114139
     Region          <289..700
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          719..774
                     /region_name="ELM2"
                     /note="ELM2 domain; pfam01448"
                     /db_xref="CDD:460214"
     Region          828..872
                     /region_name="SANT"
                     /note="'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains.
                     Tandem copies of the domain bind telomeric DNA tandem
                     repeatsas part of the capping complex. Binding is sequence
                     dependent for repeats which contain the G/C rich motif
                     [C2-3 A (CA)1-6]. The domain is...; cl21498"
                     /db_xref="CDD:473887"
     Site            order(829,858..859,861..862,864..866,868..870)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212559"
     CDS             1..1041
                     /gene="MIDEAS"
                     /coded_by="XM_061156703.1:734..3859"
                     /db_xref="GeneID:133066039"
ORIGIN      
        1 mnlqaqpkaq nkrkrclfgd qepapkeqpq plqapqqapa ppqsrvkeep yfahegpaga
       61 aahsqpvelp psnslallns vvygsertml sqqvgsvkwp nsvmapgrgp ergggggvsd
      121 sgwqqqpgqp pphstwnrhs lplysgpkgs phpgmgvsty ynhpeplkre kgggpqldry
      181 gnavrpmvpp kvqlevgrpq aplnsfhvak kppnqtlplq pfqlafghqv nrqvfrqgpp
      241 ppnpvgafpp qkqqqqqqaa lpqmqlfenf ysmqqpppsq qpqdfglqpa gplgqshlah
      301 hsmapypfpp npdmnpelrk allqesapqp vlpqaqiafp rrsrrlskeg vlpstaldga
      361 gtqpgqepas nlflhhwapq qpppgslgqp hpealgfple lresqllsdg erlapngrer
      421 eapamggeeg mravgtgdcg qvlrsgviqs trrrrrasqe anlltlaqka velaslqnak
      481 dangseekrk svlasttkcg vefsepslak raredsgmvp liipvsvpvr avdpteaaqa
      541 ggvdedgkgp eqnpaehkps vivtrrrstr ipgtdapaqa edmnvklege psvrkpkqrp
      601 rpepliiptk agtfiappvy snitpyqshl rspvrladhp sersfelppy tpppilspvr
      661 egsglyfnai mstssipapp pitpksahrt llrsnsaevt ppvlsvmgea tpvsieprin
      721 vgsrfqaeip smrdralaaa dphkadlvwq pwevlessre kqrqvedllt aacssifpga
      781 gtnqelalhc lhesrgdile tlnklllkkp lrphnhplat yhytgsdqwk maerklfnkg
      841 iaiykkdffl vqkliqtktv aqcvefyyty kkqvkigrng tltfgdvdts deksaqeeve
      901 vdiktsqkfp rvppprresp seerlepkke eketrkegee empetqdkge qeegrersrr
      961 aaavkatqtl qanesandil ilrshesnap gsaggqasek pregpgksrr alpfsekkkk
     1021 ietfnktqnq entfpckkcg r
//
LOCUS       XP_061012687            1028 aa            linear   MAM 02-DEC-2023
DEFINITION  mitotic deacetylase-associated SANT domain protein isoform X3 [Dama
            dama].
ACCESSION   XP_061012687
VERSION     XP_061012687.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156704.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1028
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1028
                     /product="mitotic deacetylase-associated SANT domain
                     protein isoform X3"
                     /calculated_mol_wt=112032
     Region          <289..700
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          719..774
                     /region_name="ELM2"
                     /note="ELM2 domain; pfam01448"
                     /db_xref="CDD:460214"
     Region          828..872
                     /region_name="SANT"
                     /note="'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains.
                     Tandem copies of the domain bind telomeric DNA tandem
                     repeatsas part of the capping complex. Binding is sequence
                     dependent for repeats which contain the G/C rich motif
                     [C2-3 A (CA)1-6]. The domain is...; cl21498"
                     /db_xref="CDD:473887"
     Site            order(829,858..859,861..862,864..866,868..870)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212559"
     CDS             1..1028
                     /gene="MIDEAS"
                     /coded_by="XM_061156704.1:735..3821"
                     /db_xref="GeneID:133066039"
ORIGIN      
        1 mnlqaqpkaq nkrkrclfgd qepapkeqpq plqapqqapa ppqsrvkeep yfahegpaga
       61 aahsqpvelp psnslallns vvygsertml sqqvgsvkwp nsvmapgrgp ergggggvsd
      121 sgwqqqpgqp pphstwnrhs lplysgpkgs phpgmgvsty ynhpeplkre kgggpqldry
      181 gnavrpmvpp kvqlevgrpq aplnsfhvak kppnqtlplq pfqlafghqv nrqvfrqgpp
      241 ppnpvgafpp qkqqqqqqaa lpqmqlfenf ysmqqpppsq qpqdfglqpa gplgqshlah
      301 hsmapypfpp npdmnpelrk allqesapqp vlpqaqiafp rrsrrlskeg vlpstaldga
      361 gtqpgqepas nlflhhwapq qpppgslgqp hpealgfple lresqllsdg erlapngrer
      421 eapamggeeg mravgtgdcg qvlrsgviqs trrrrrasqe anlltlaqka velaslqnak
      481 dangseekrk svlasttkcg vefsepslak raredsgmvp liipvsvpvr avdpteaaqa
      541 ggvdedgkgp eqnpaehkps vivtrrrstr ipgtdapaqa edmnvklege psvrkpkqrp
      601 rpepliiptk agtfiappvy snitpyqshl rspvrladhp sersfelppy tpppilspvr
      661 egsglyfnai mstssipapp pitpksahrt llrsnsaevt ppvlsvmgea tpvsieprin
      721 vgsrfqaeip smrdralaaa dphkadlvwq pwevlessre kqrqvedllt aacssifpga
      781 gtnqelalhc lhesrgdile tlnklllkkp lrphnhplat yhytgsdqwk maerklfnkg
      841 iaiykkdffl vqkliqtktv aqcvefyyty kkqvkigrng tltfgdvdts deksaqeeve
      901 vdikandili lrshesnapg saggqasekp regpgksrra lpfsekkkki etfnktqnqe
      961 ntfpckkcgr vffkvksrsa hmkshaeqek kaaalrqkek eaaaaaataa asphqpalre
     1021 esgagerg
//
LOCUS       XP_061012688             353 aa            linear   MAM 02-DEC-2023
DEFINITION  paraneoplastic antigen Ma1 [Dama dama].
ACCESSION   XP_061012688
VERSION     XP_061012688.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156705.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..353
                     /product="paraneoplastic antigen Ma1"
                     /calculated_mol_wt=39583
     Region          1..325
                     /region_name="PNMA"
                     /note="pfam14893"
                     /db_xref="CDD:464357"
     CDS             1..353
                     /gene="PNMA1"
                     /coded_by="XM_061156705.1:1016..2077"
                     /db_xref="GeneID:133066040"
ORIGIN      
        1 mamtlledwc rgmdvnsqra llvwgipvnc deaeieetlq aampqvhyrv lgrmfwreen
       61 akaalleltg tvdyaaipre mpgkggvwkv vfkpptsdae flerlhvfla regwtvrdva
      121 rvlgfenpap apgpdmpaem lnyildnvik pliesiwykk ltlfsgrdip gpgeetfepw
      181 lehaneviee wqvsdtekrr rlmeslrgpa advirilktn npdittaecl kaleqvfgsv
      241 essrdvqvrf lntyqnpgek lsayvirlep llqkvvekga idkenvnqar leqviaganh
      301 sgairrqlwl tgaaegpapn lfqllvqire eeakeeeeaa eaallqigle ghl
//
LOCUS       XP_061012689             190 aa            linear   MAM 02-DEC-2023
DEFINITION  dynein axonemal light chain 1 [Dama dama].
ACCESSION   XP_061012689
VERSION     XP_061012689.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156706.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..190
                     /product="dynein axonemal light chain 1"
                     /calculated_mol_wt=21419
     Region          37..181
                     /region_name="PPP1R42"
                     /note="protein phosphatase 1 regulatory subunit 42;
                     cl42388"
                     /db_xref="CDD:455733"
     Region          50..71
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          72..90
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          95..116
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275382"
     Region          117..140
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275382"
     Region          142..172
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275382"
     CDS             1..190
                     /gene="DNAL1"
                     /coded_by="XM_061156706.1:426..998"
                     /db_xref="GeneID:133066041"
ORIGIN      
        1 makattikea larweektsq kpseareikl yaqippiekm daslstlsnc eklslstnci
       61 ekianlnglk nlrilslgrn niknlnglea vgdtleelwi synfieklkg ihvmkklkil
      121 ymsnnlvkdw aefvklaelp cledlvfvgn pleekhsaeg nwieeatkrv pklkkldgtp
      181 vikedeeedn
//
LOCUS       XP_061012690             421 aa            linear   MAM 02-DEC-2023
DEFINITION  acyl-coenzyme A thioesterase 1-like [Dama dama].
ACCESSION   XP_061012690
VERSION     XP_061012690.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156707.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..421
                     /product="acyl-coenzyme A thioesterase 1-like"
                     /calculated_mol_wt=45908
     Region          16..140
                     /region_name="Bile_Hydr_Trans"
                     /note="Acyl-CoA thioester hydrolase/BAAT N-terminal
                     region; pfam04775"
                     /db_xref="CDD:461422"
     Region          203..412
                     /region_name="BAAT_C"
                     /note="BAAT / Acyl-CoA thioester hydrolase C terminal;
                     pfam08840"
                     /db_xref="CDD:430252"
     CDS             1..421
                     /gene="LOC133066042"
                     /coded_by="XM_061156707.1:138..1403"
                     /db_xref="GeneID:133066042"
ORIGIN      
        1 mtvtvtlepa grcrwdepvr ivvrglapgq pvtlraalrd ekgalfraha rycadaagll
       61 dlerapalgg sfaglepmgl fwalepekpl lrlvkrdvqt pfavelevld ghepeaqrll
      121 gravherdfl apgvrrepvr agrvraslfl ppepgpfpgi vdisaagggl leyrasllag
      181 kgfavmalay ynyedlpksl rhvhleyfee avnyllnhpq vkgpgvgllg iskggelcls
      241 masflkgita aviingsvvs vwgtlqykge ilppvgfnqn rikmtkdgfa divevlnspl
      301 egpdqksfip veraecpflf lvgqddhnwk sefyaneask rlqahgkakp qvicypgtgh
      361 yieppyfplc paslhtfvgv pviwggepra haraqvdawq qlqtffhkhl ggkkgttpak
      421 l
//
LOCUS       XP_061012691             416 aa            linear   MAM 02-DEC-2023
DEFINITION  peroxisomal succinyl-coenzyme A thioesterase-like [Dama dama].
ACCESSION   XP_061012691
VERSION     XP_061012691.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156708.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..416
                     /product="peroxisomal succinyl-coenzyme A
                     thioesterase-like"
                     /calculated_mol_wt=45438
     Region          16..140
                     /region_name="Bile_Hydr_Trans"
                     /note="Acyl-CoA thioester hydrolase/BAAT N-terminal
                     region; pfam04775"
                     /db_xref="CDD:461422"
     Region          203..412
                     /region_name="BAAT_C"
                     /note="BAAT / Acyl-CoA thioester hydrolase C terminal;
                     pfam08840"
                     /db_xref="CDD:430252"
     CDS             1..416
                     /gene="LOC133066043"
                     /coded_by="XM_061156708.1:1285..2535"
                     /db_xref="GeneID:133066043"
ORIGIN      
        1 mvatvtlepa grcrwdepvr ivvrglapgq pvtlraalrd ekgalfraha rycadaagll
       61 dlerapalgg sfaglepmgl fwalepekpf wrflkrdvqt pfavelevfd ghepgtqrll
      121 gralherdfl apgvrrepvr agrvraslfl ppgsgpfpgi idifgvgggl leyrasllag
      181 hgfatlalay csfedlpkkf dtidldyfee alcymlqhtq ikgpgigllg islgadicls
      241 masflknisa tvsingsgfi gdkamyyken sipplghdlr rvkvafsgll divdvrndiv
      301 ggcenpcmip iekaqgpilf ivgqddhnwr sefcaqiase rlqahgkekp qiisypgagh
      361 yieppyfpmc paslhtsldk pvmwggepra hskaqldawk qiltfftkhl gpspkl
//
LOCUS       XP_061012692             424 aa            linear   MAM 02-DEC-2023
DEFINITION  peroxisomal succinyl-coenzyme A thioesterase-like [Dama dama].
ACCESSION   XP_061012692
VERSION     XP_061012692.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156709.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..424
                     /product="peroxisomal succinyl-coenzyme A
                     thioesterase-like"
                     /calculated_mol_wt=46505
     Region          24..148
                     /region_name="Bile_Hydr_Trans"
                     /note="Acyl-CoA thioester hydrolase/BAAT N-terminal
                     region; pfam04775"
                     /db_xref="CDD:461422"
     Region          211..420
                     /region_name="BAAT_C"
                     /note="BAAT / Acyl-CoA thioester hydrolase C terminal;
                     pfam08840"
                     /db_xref="CDD:430252"
     CDS             1..424
                     /gene="LOC133066044"
                     /coded_by="XM_061156709.1:136..1410"
                     /db_xref="GeneID:133066044"
ORIGIN      
        1 mgcdsasgmt vtvtlepagr crwdepvriv vrglapgqpv tlraalrdek galfrahary
       61 cadaaglldl erapalggsf aglepmglfw alepekpfwr flkrdvqtpf avelevfdgh
      121 epgtqrllgr alherdflap gvrrepvrag rvraslflpp gsgpfpgiid ifgiggglle
      181 yrasllaghg fatlalayyd fddlpkkfdv ihleyfeeal cymlqhtqik gprigllgis
      241 lgadiclsma sflknisatv singsgfsgh rvihykdsni pplghdlrrv kvafsglldi
      301 vdvrndivgg cenpcmipie kaqgpilfiv gqddhnwrse fyaqiaserl qahgkekpqi
      361 isypgaghyi eppyfpmcpa slhklldkpv mwggeprahs kaqldawkqi ltfftkhlgp
      421 spkl
//
LOCUS       XP_061012693             464 aa            linear   MAM 02-DEC-2023
DEFINITION  acyl-coenzyme A thioesterase 1-like [Dama dama].
ACCESSION   XP_061012693
VERSION     XP_061012693.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156710.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..464
                     /product="acyl-coenzyme A thioesterase 1-like"
                     /calculated_mol_wt=50642
     Region          59..183
                     /region_name="Bile_Hydr_Trans"
                     /note="Acyl-CoA thioester hydrolase/BAAT N-terminal
                     region; pfam04775"
                     /db_xref="CDD:461422"
     Region          246..455
                     /region_name="BAAT_C"
                     /note="BAAT / Acyl-CoA thioester hydrolase C terminal;
                     pfam08840"
                     /db_xref="CDD:430252"
     CDS             1..464
                     /gene="LOC133066045"
                     /coded_by="XM_061156710.1:268..1662"
                     /db_xref="GeneID:133066045"
ORIGIN      
        1 mvvssqalls hfrfcrwgpt rwvqlagplk lrtgnpvswt tvrlvatvtl epagrcrwde
       61 pvrivvrgla pgqpvtlraa lrddkgalfr aharycadaa glldlerapa lggsfaglep
      121 mglfwalese kpllrlvkrd vqtpfavele vlgghepgtq lllgravher dflapgvrre
      181 pvragrvras lflppepgpf pgivdilgvg gglleyrasl lagkgfavma layynyedlp
      241 kslenlhley feeavnylln hpqvkgpgvg llgiskggel clsmasflkg itaaviings
      301 varvggnlhy kgeilppvgf nhnrrkitkd glvdivevln splegpdqks fipveraecp
      361 flflvgqddh nwksefyane askrlqahgk akprvicypg tghyieppyf plcpaslhtf
      421 vgvpviwgge praharaqvd awqqlqtffr khlggekgti pakl
//
LOCUS       XP_061012694             464 aa            linear   MAM 02-DEC-2023
DEFINITION  acyl-coenzyme A thioesterase 1-like [Dama dama].
ACCESSION   XP_061012694
VERSION     XP_061012694.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156711.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..464
                     /product="acyl-coenzyme A thioesterase 1-like"
                     /calculated_mol_wt=50642
     Region          59..183
                     /region_name="Bile_Hydr_Trans"
                     /note="Acyl-CoA thioester hydrolase/BAAT N-terminal
                     region; pfam04775"
                     /db_xref="CDD:461422"
     Region          246..455
                     /region_name="BAAT_C"
                     /note="BAAT / Acyl-CoA thioester hydrolase C terminal;
                     pfam08840"
                     /db_xref="CDD:430252"
     CDS             1..464
                     /gene="LOC133066045"
                     /coded_by="XM_061156711.1:437..1831"
                     /db_xref="GeneID:133066045"
ORIGIN      
        1 mvvssqalls hfrfcrwgpt rwvqlagplk lrtgnpvswt tvrlvatvtl epagrcrwde
       61 pvrivvrgla pgqpvtlraa lrddkgalfr aharycadaa glldlerapa lggsfaglep
      121 mglfwalese kpllrlvkrd vqtpfavele vlgghepgtq lllgravher dflapgvrre
      181 pvragrvras lflppepgpf pgivdilgvg gglleyrasl lagkgfavma layynyedlp
      241 kslenlhley feeavnylln hpqvkgpgvg llgiskggel clsmasflkg itaaviings
      301 varvggnlhy kgeilppvgf nhnrrkitkd glvdivevln splegpdqks fipveraecp
      361 flflvgqddh nwksefyane askrlqahgk akprvicypg tghyieppyf plcpaslhtf
      421 vgvpviwgge praharaqvd awqqlqtffr khlggekgti pakl
//
LOCUS       XP_061012695             972 aa            linear   MAM 02-DEC-2023
DEFINITION  HEAT repeat-containing protein 4 [Dama dama].
ACCESSION   XP_061012695
VERSION     XP_061012695.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156712.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..972
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..972
                     /product="HEAT repeat-containing protein 4"
                     /calculated_mol_wt=109659
     Region          628..720
                     /region_name="HEAT_2"
                     /note="HEAT repeats; pfam13646"
                     /db_xref="CDD:433376"
     Site            order(678..679,682,685..686,689,713..714,717,720..721,724,
                     778..779,782,785..786,812..813,816,819..820)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          699..725
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          711..856
                     /region_name="HEAT"
                     /note="HEAT repeat [General function prediction only];
                     COG1413"
                     /db_xref="CDD:441023"
     Region          760..786
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          795..821
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          <812..>912
                     /region_name="COG3920"
                     /note="Two-component sensor histidine kinase, HisKA and
                     HATPase domains [Signal transduction mechanisms]"
                     /db_xref="CDD:443125"
     Region          827..852
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     CDS             1..972
                     /gene="HEATR4"
                     /coded_by="XM_061156712.1:2974..5892"
                     /db_xref="GeneID:133066046"
ORIGIN      
        1 mcshpprpss gpgsleggic wetvtrtekg ktilphhfpq slpprlgwgm ifssvkprnk
       61 kecasvsgvp pvfhfspqhc ahlknkyltq asanltfspe vvwqrglpsv pysqysfdhl
      121 ydasgiiqpr qvrtarpekk pvclkvsdsp gpptkvtsqa vktesyanpt klkklepasv
      181 gqeassplsv hpsreldmld lslapevnle eretwlppae kaaraweavv leklnkrtar
      241 wiqnkrpprp gvsaskwqsf lrqqydwshi rdeltsssdl dllkqleeee taefegrsvv
      301 lptleekkpe lllpvyyrlp nylpqvqtae tmpgmnktae eidekgslyk ppsqshvrqv
      361 npragkfays tgntfeqeiy fdevqivhqi gakrdqille nlnqyikqls kvfpetperw
      421 tsqpvpestc kpvkgamrwt alptpatdll lkvgekdmsv ktrklkkqae slkenvswel
      481 vvlrrmlqew kvawaliiew hhktvegllq slvdihddvr iqaiitcata alerpraavs
      541 rgdsdketmk assiqdlpev lqpplmaalc dknanvrmaa avcqyaiqsh nplaqeimqt
      601 vllkgntvds waaaqclald gaatypvikr iihqlfhkkn edteqqsctl lrhlsgkttl
      661 ihtmlaveln srqwkdriva cralsriggn vsldmkhkli qlmlsdwnkk vrhaaaqalg
      721 qmnlgkevhd tiriklgqgn fqgrvealyl icglklmtak llpsfldcfs ddfmavrraa
      781 claagalqih dnrvleclln liqgdpcwki kafairalgq igcvspqltd lllwaihyee
      841 spgvrleacr silalrlqgd rvrdtfldvl llenheavlk eihhamkiln lenegnqeml
      901 qeirnriqtl sqkelliqkv fkieaairkv keeakrvyvq pkegqkplkl htflqeifqg
      961 rfsrnesyal ip
//
LOCUS       XP_061012696             654 aa            linear   MAM 02-DEC-2023
DEFINITION  ribosomal oxygenase 1 [Dama dama].
ACCESSION   XP_061012696
VERSION     XP_061012696.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156713.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..654
                     /product="ribosomal oxygenase 1"
                     /calculated_mol_wt=72314
     Region          312..445
                     /region_name="JmjC_2"
                     /note="JmjC domain; pfam08007"
                     /db_xref="CDD:462340"
     CDS             1..654
                     /gene="RIOX1"
                     /coded_by="XM_061156713.1:49..2013"
                     /db_xref="GeneID:133066047"
ORIGIN      
        1 mdglrasagl lrrgrlrrrr qqqphsgsvl alplrprkir rqlrrsassr maalraqtlp
       61 sedsedsrve stvgqpgdpm aggaaallda tgrephgqlg pgelpeaspa srslqtpral
      121 geaqtpaarl veaqtpparl vetsalparl vpasgslvet sallcsaqhl aaappsvasa
      181 tlsgpqggst sgelpwdspl qrilaelnci pssrrraarl fewlispmpp dhfyrrlwer
      241 eavlvrrqdh syyqglfsta dldsilrsee vqfgqhldaa ryingrretl nppgralpaa
      301 awslyragcs lrllcpqafs ttvwqflavl qeqfgsmags nvyltppnsq gfaphyddie
      361 afvlqlegrk lwrvyrprvp teelaltssp nfgqddlgep vlqtvlepgd llyfprgfih
      421 qaecqdgvhs lhltlstfqr ntwgdfleav lplavqaame envefrrglp rdfmdymgaq
      481 hsdskdprrt afmekvrvlv arlghfapvd avadqrakdf ihdslppvlt dreralsvyg
      541 lpirweagep vnvgaqltte tevhmlqdgi arlvgegghl flyytvensr vyhleepkcl
      601 eiypqqadam elllrsypef vrvgdlpcdt vedqlslatm lydkgllltk mplt
//
LOCUS       XP_061012697            1353 aa            linear   MAM 02-DEC-2023
DEFINITION  papilin isoform X1 [Dama dama].
ACCESSION   XP_061012697
VERSION     XP_061012697.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156714.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1353
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1353
                     /product="papilin isoform X1"
                     /calculated_mol_wt=145587
     Region          83..134
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          139..236
                     /region_name="ADAMTS_CR_3"
                     /note="ADAMTS cysteine-rich domain; pfam19236"
                     /db_xref="CDD:437068"
     Region          238..352
                     /region_name="ADAMTS_spacer1"
                     /note="ADAM-TS Spacer 1; pfam05986"
                     /db_xref="CDD:461796"
     Region          362..414
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          442..500
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          503..556
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          564..614
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          <588..1112
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          824..874
                     /region_name="Kunitz_papilin"
                     /note="Kunitz domain of papilin, and similar proteins;
                     cd22635"
                     /db_xref="CDD:438678"
     Region          877..975
                     /region_name="Papilin_u7"
                     /note="Linking region between Kunitz_BPTI and I-set on
                     papilin; pfam16626"
                     /db_xref="CDD:374683"
     Region          985..>1048
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          997..1001
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1010..1014
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1031..1035
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1119..1186
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          1131..1135
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1144..1148
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1165..1169
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1179..1184
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1205..1289
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          1220..1224
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1232..1236
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1255..1259
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1269..1274
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1282..1285
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1305..1337
                     /region_name="PLAC"
                     /note="PLAC (protease and lacunin) domain; pfam08686"
                     /db_xref="CDD:462560"
     CDS             1..1353
                     /gene="PAPLN"
                     /coded_by="XM_061156714.1:469..4530"
                     /db_xref="GeneID:133066049"
ORIGIN      
        1 mgerifpfle rfgviplpfl cqalslckns htspggpsct aavsplfrig ptemrlllll
       61 vplllapvpg ssapqvrrqs dtwgswgnws pcsrtcgggv sfrerlcytq rrdggsscvg
      121 ptrshrscrt escpdgardf raeqcaefds qefqgrrykw lpyygapnkc elncipkges
      181 fyykhkeavv dgtpcepgkr dicvdgscrv vgcdhhldsl kqedkclqcg gdgttcypvt
      241 gvfeandlsr gynqilivpv gatsirieea aasrnflavk sirgeyylng hwtiedaral
      301 pvastllhye rgaegdlape rlhargptse plvielisqe pnpgvrfeyh lplgaprpgf
      361 swshsswgdc saecgggqqt rwvfctmdde vypehlcqsq prpadrrpcs sqpcphtkrt
      421 sylhrprawh lagaqrmcrs swktgpwtlc sascgggfqs rsvycvsfdg agaqeaaeda
      481 eceglpekpp grqacnlqrc agwsvepwse csvscgagvr rrsvtcrgde gsllhttacs
      541 ledrppltep cvrdhcplls dqawhvgawg lcskscrsgt rrrqvvcalg ppghcgslqp
      601 skpaaveacn tqpcdlppev psmpevhtsp rdprmslgpr easasdfrdq wwapqeqpsa
      661 wgnprgdqsp pvsapgpaps lqlssygqpl qpgsgphdcr qsshgccpdg htaslgpqwq
      721 gcpgaslcqq srfgccpdgv tvaegphqag ctsfhrrdda ggrpgsraaa savpsahrpq
      781 aqqnepsecr gsqfgccydh vasaagplge gcvgqpssay pvrcllpsah gsctdwaarw
      841 yfvasvgqcn rfwyggchgn annfaseeec vsacrgpqpg artsgqsthg dgggsgpggq
      901 qeagqqepsq hgpgpvvqrr plpsgglwwr dqepglgvmd hrqafgegpw gqetgpsppg
      961 lsgdagrpap psrgssyrit lagsepsvvq aalgqlvrlf csedgspgph srwqkdgrpv
     1021 ssdrhqlqsd gslvisplra ddagtyscgs pgpdhhsqqv qlrvtaggdv avpseaeprp
     1081 fpetrdpaqd hrprdpslgg patashpwpl trvrldrsqp gvldaqpgqr vrltcraegf
     1141 ppptiewqrd gqplssprhq lqsdgslvis rvavedggfy tcvafnghdr dqrwvqlrvl
     1201 geltitglps tmavqegdta rllcvvages vnirwsrngl pvradghrvh qspdgtllih
     1261 nlrardegsy tcsayrgsqa vsrstevkvv ppalatqprd psrdcvdqpe lancdlilqa
     1321 rlcgneyyss fccascsrvq ppaqpvwqqg hss
//
LOCUS       XP_061012698            1352 aa            linear   MAM 02-DEC-2023
DEFINITION  papilin isoform X2 [Dama dama].
ACCESSION   XP_061012698
VERSION     XP_061012698.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156715.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1352
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1352
                     /product="papilin isoform X2"
                     /calculated_mol_wt=145516
     Region          83..134
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          139..236
                     /region_name="ADAMTS_CR_3"
                     /note="ADAMTS cysteine-rich domain; pfam19236"
                     /db_xref="CDD:437068"
     Region          238..352
                     /region_name="ADAMTS_spacer1"
                     /note="ADAM-TS Spacer 1; pfam05986"
                     /db_xref="CDD:461796"
     Region          362..414
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          442..500
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          503..556
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          564..614
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          <588..1111
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          824..874
                     /region_name="Kunitz_papilin"
                     /note="Kunitz domain of papilin, and similar proteins;
                     cd22635"
                     /db_xref="CDD:438678"
     Region          877..975
                     /region_name="Papilin_u7"
                     /note="Linking region between Kunitz_BPTI and I-set on
                     papilin; pfam16626"
                     /db_xref="CDD:374683"
     Region          985..>1048
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          997..1001
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1010..1014
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1031..1035
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1118..1185
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          1130..1134
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1143..1147
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1164..1168
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1178..1183
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1204..1288
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          1219..1223
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1231..1235
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1254..1258
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1268..1273
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1281..1284
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1304..1336
                     /region_name="PLAC"
                     /note="PLAC (protease and lacunin) domain; pfam08686"
                     /db_xref="CDD:462560"
     CDS             1..1352
                     /gene="PAPLN"
                     /coded_by="XM_061156715.1:469..4527"
                     /db_xref="GeneID:133066049"
ORIGIN      
        1 mgerifpfle rfgviplpfl cqalslckns htspggpsct aavsplfrig ptemrlllll
       61 vplllapvpg ssapqvrrqs dtwgswgnws pcsrtcgggv sfrerlcytq rrdggsscvg
      121 ptrshrscrt escpdgardf raeqcaefds qefqgrrykw lpyygapnkc elncipkges
      181 fyykhkeavv dgtpcepgkr dicvdgscrv vgcdhhldsl kqedkclqcg gdgttcypvt
      241 gvfeandlsr gynqilivpv gatsirieea aasrnflavk sirgeyylng hwtiedaral
      301 pvastllhye rgaegdlape rlhargptse plvielisqe pnpgvrfeyh lplgaprpgf
      361 swshsswgdc saecgggqqt rwvfctmdde vypehlcqsq prpadrrpcs sqpcphtkrt
      421 sylhrprawh lagaqrmcrs swktgpwtlc sascgggfqs rsvycvsfdg agaqeaaeda
      481 eceglpekpp grqacnlqrc agwsvepwse csvscgagvr rrsvtcrgde gsllhttacs
      541 ledrppltep cvrdhcplls dqawhvgawg lcskscrsgt rrrqvvcalg ppghcgslqp
      601 skpaaveacn tqpcdlppev psmpevhtsp rdprmslgpr easasdfrdq wwapqeqpsa
      661 wgnprgdqsp pvsapgpaps lqlssygqpl qpgsgphdcr qsshgccpdg htaslgpqwq
      721 gcpgaslcqq srfgccpdgv tvaegphqag ctsfhrrdda ggrpgsraaa savpsahrpq
      781 aqqnepsecr gsqfgccydh vasaagplge gcvgqpssay pvrcllpsah gsctdwaarw
      841 yfvasvgqcn rfwyggchgn annfaseeec vsacrgpqpg artsgqsthg dgggsgpggq
      901 qeagqqepsq hgpgpvvqrr plpsgglwwr dqepglgvmd hrqafgegpw gqetgpsppg
      961 lsgdagrpap psrgssyrit lagsepsvvq aalgqlvrlf csedgspgph srwqkdgrpv
     1021 ssdrhqlqsd gslvisplra ddagtyscgs pgpdhhsqqv qlrvtggdva vpseaeprpf
     1081 petrdpaqdh rprdpslggp atashpwplt rvrldrsqpg vldaqpgqrv rltcraegfp
     1141 pptiewqrdg qplssprhql qsdgslvisr vavedggfyt cvafnghdrd qrwvqlrvlg
     1201 eltitglpst mavqegdtar llcvvagesv nirwsrnglp vradghrvhq spdgtllihn
     1261 lrardegsyt csayrgsqav srstevkvvp palatqprdp srdcvdqpel ancdlilqar
     1321 lcgneyyssf ccascsrvqp paqpvwqqgh ss
//
LOCUS       XP_061012699            1331 aa            linear   MAM 02-DEC-2023
DEFINITION  papilin isoform X3 [Dama dama].
ACCESSION   XP_061012699
VERSION     XP_061012699.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156716.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1331
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1331
                     /product="papilin isoform X3"
                     /calculated_mol_wt=143020
     Region          83..134
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          139..236
                     /region_name="ADAMTS_CR_3"
                     /note="ADAMTS cysteine-rich domain; pfam19236"
                     /db_xref="CDD:437068"
     Region          238..352
                     /region_name="ADAMTS_spacer1"
                     /note="ADAM-TS Spacer 1; pfam05986"
                     /db_xref="CDD:461796"
     Region          362..414
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          420..478
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          481..534
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          542..592
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          <566..1090
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          802..852
                     /region_name="Kunitz_papilin"
                     /note="Kunitz domain of papilin, and similar proteins;
                     cd22635"
                     /db_xref="CDD:438678"
     Region          855..953
                     /region_name="Papilin_u7"
                     /note="Linking region between Kunitz_BPTI and I-set on
                     papilin; pfam16626"
                     /db_xref="CDD:374683"
     Region          963..>1026
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          975..979
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          988..992
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1009..1013
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1097..1164
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          1109..1113
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1122..1126
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1143..1147
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1157..1162
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1183..1267
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          1198..1202
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1210..1214
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1233..1237
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1247..1252
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1260..1263
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1283..1315
                     /region_name="PLAC"
                     /note="PLAC (protease and lacunin) domain; pfam08686"
                     /db_xref="CDD:462560"
     CDS             1..1331
                     /gene="PAPLN"
                     /coded_by="XM_061156716.1:467..4462"
                     /db_xref="GeneID:133066049"
ORIGIN      
        1 mgerifpfle rfgviplpfl cqalslckns htspggpsct aavsplfrig ptemrlllll
       61 vplllapvpg ssapqvrrqs dtwgswgnws pcsrtcgggv sfrerlcytq rrdggsscvg
      121 ptrshrscrt escpdgardf raeqcaefds qefqgrrykw lpyygapnkc elncipkges
      181 fyykhkeavv dgtpcepgkr dicvdgscrv vgcdhhldsl kqedkclqcg gdgttcypvt
      241 gvfeandlsr gynqilivpv gatsirieea aasrnflavk sirgeyylng hwtiedaral
      301 pvastllhye rgaegdlape rlhargptse plvielisqe pnpgvrfeyh lplgaprpgf
      361 swshsswgdc saecgggqqt rwvfctmdde vypehlcqsq prpadrrpcs sqpcphtkrw
      421 ktgpwtlcsa scgggfqsrs vycvsfdgag aqeaaedaec eglpekppgr qacnlqrcag
      481 wsvepwsecs vscgagvrrr svtcrgdegs llhttacsle drppltepcv rdhcpllsdq
      541 awhvgawglc skscrsgtrr rqvvcalgpp ghcgslqpsk paaveacntq pcdlppevps
      601 mpevhtsprd prmslgprea sasdfrdqww apqeqpsawg nprgdqsppv sapgpapslq
      661 lssygqplqp gsgphdcrqs shgccpdght aslgpqwqgc pgaslcqqsr fgccpdgvtv
      721 aegphqagct sfhrrddagg rpgsraaasa vpsahrpqaq qnepsecrgs qfgccydhva
      781 saagplgegc vgqpssaypv rcllpsahgs ctdwaarwyf vasvgqcnrf wyggchgnan
      841 nfaseeecvs acrgpqpgar tsgqsthgdg ggsgpggqqe agqqepsqhg pgpvvqrrpl
      901 psgglwwrdq epglgvmdhr qafgegpwgq etgpsppgls gdagrpapps rgssyritla
      961 gsepsvvqaa lgqlvrlfcs edgspgphsr wqkdgrpvss drhqlqsdgs lvisplradd
     1021 agtyscgspg pdhhsqqvql rvtaggdvav pseaeprpfp etrdpaqdhr prdpslggpa
     1081 tashpwpltr vrldrsqpgv ldaqpgqrvr ltcraegfpp ptiewqrdgq plssprhqlq
     1141 sdgslvisrv avedggfytc vafnghdrdq rwvqlrvlge ltitglpstm avqegdtarl
     1201 lcvvagesvn irwsrnglpv radghrvhqs pdgtllihnl rardegsytc sayrgsqavs
     1261 rstevkvvpp alatqprdps rdcvdqpela ncdlilqarl cgneyyssfc cascsrvqpp
     1321 aqpvwqqghs s
//
LOCUS       XP_061012700            1300 aa            linear   MAM 02-DEC-2023
DEFINITION  papilin isoform X4 [Dama dama].
ACCESSION   XP_061012700
VERSION     XP_061012700.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156717.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1300
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1300
                     /product="papilin isoform X4"
                     /calculated_mol_wt=139913
     Region          30..81
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          86..183
                     /region_name="ADAMTS_CR_3"
                     /note="ADAMTS cysteine-rich domain; pfam19236"
                     /db_xref="CDD:437068"
     Region          185..299
                     /region_name="ADAMTS_spacer1"
                     /note="ADAM-TS Spacer 1; pfam05986"
                     /db_xref="CDD:461796"
     Region          309..361
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          389..447
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          450..503
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          511..561
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          <535..1059
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          771..821
                     /region_name="Kunitz_papilin"
                     /note="Kunitz domain of papilin, and similar proteins;
                     cd22635"
                     /db_xref="CDD:438678"
     Region          824..922
                     /region_name="Papilin_u7"
                     /note="Linking region between Kunitz_BPTI and I-set on
                     papilin; pfam16626"
                     /db_xref="CDD:374683"
     Region          932..>995
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          944..948
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          957..961
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          978..982
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1066..1133
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          1078..1082
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1091..1095
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1112..1116
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1126..1131
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1152..1236
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          1167..1171
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1179..1183
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1202..1206
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1216..1221
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1229..1232
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1252..1284
                     /region_name="PLAC"
                     /note="PLAC (protease and lacunin) domain; pfam08686"
                     /db_xref="CDD:462560"
     CDS             1..1300
                     /gene="PAPLN"
                     /coded_by="XM_061156717.1:868..4770"
                     /db_xref="GeneID:133066049"
ORIGIN      
        1 mrlllllvpl llapvpgssa pqvrrqsdtw gswgnwspcs rtcgggvsfr erlcytqrrd
       61 ggsscvgptr shrscrtesc pdgardfrae qcaefdsqef qgrrykwlpy ygapnkceln
      121 cipkgesfyy khkeavvdgt pcepgkrdic vdgscrvvgc dhhldslkqe dkclqcggdg
      181 ttcypvtgvf eandlsrgyn qilivpvgat sirieeaaas rnflavksir geyylnghwt
      241 iedaralpva stllhyerga egdlaperlh argptseplv ielisqepnp gvrfeyhlpl
      301 gaprpgfsws hsswgdcsae cgggqqtrwv fctmddevyp ehlcqsqprp adrrpcssqp
      361 cphtkrtsyl hrprawhlag aqrmcrsswk tgpwtlcsas cgggfqsrsv ycvsfdgaga
      421 qeaaedaece glpekppgrq acnlqrcagw svepwsecsv scgagvrrrs vtcrgdegsl
      481 lhttacsled rppltepcvr dhcpllsdqa whvgawglcs kscrsgtrrr qvvcalgppg
      541 hcgslqpskp aaveacntqp cdlppevpsm pevhtsprdp rmslgpreas asdfrdqwwa
      601 pqeqpsawgn prgdqsppvs apgpapslql ssygqplqpg sgphdcrqss hgccpdghta
      661 slgpqwqgcp gaslcqqsrf gccpdgvtva egphqagcts fhrrddaggr pgsraaasav
      721 psahrpqaqq nepsecrgsq fgccydhvas aagplgegcv gqpssaypvr cllpsahgsc
      781 tdwaarwyfv asvgqcnrfw yggchgnann faseeecvsa crgpqpgart sgqsthgdgg
      841 gsgpggqqea gqqepsqhgp gpvvqrrplp sgglwwrdqe pglgvmdhrq afgegpwgqe
      901 tgpsppglsg dagrpappsr gssyritlag sepsvvqaal gqlvrlfcse dgspgphsrw
      961 qkdgrpvssd rhqlqsdgsl visplradda gtyscgspgp dhhsqqvqlr vtaggdvavp
     1021 seaeprpfpe trdpaqdhrp rdpslggpat ashpwpltrv rldrsqpgvl daqpgqrvrl
     1081 tcraegfppp tiewqrdgqp lssprhqlqs dgslvisrva vedggfytcv afnghdrdqr
     1141 wvqlrvlgel titglpstma vqegdtarll cvvagesvni rwsrnglpvr adghrvhqsp
     1201 dgtllihnlr ardegsytcs ayrgsqavsr stevkvvppa latqprdpsr dcvdqpelan
     1261 cdlilqarlc gneyyssfcc ascsrvqppa qpvwqqghss
//
LOCUS       XP_061012702            1300 aa            linear   MAM 02-DEC-2023
DEFINITION  papilin isoform X4 [Dama dama].
ACCESSION   XP_061012702
VERSION     XP_061012702.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156719.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1300
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1300
                     /product="papilin isoform X4"
                     /calculated_mol_wt=139913
     Region          30..81
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          86..183
                     /region_name="ADAMTS_CR_3"
                     /note="ADAMTS cysteine-rich domain; pfam19236"
                     /db_xref="CDD:437068"
     Region          185..299
                     /region_name="ADAMTS_spacer1"
                     /note="ADAM-TS Spacer 1; pfam05986"
                     /db_xref="CDD:461796"
     Region          309..361
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          389..447
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          450..503
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          511..561
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          <535..1059
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          771..821
                     /region_name="Kunitz_papilin"
                     /note="Kunitz domain of papilin, and similar proteins;
                     cd22635"
                     /db_xref="CDD:438678"
     Region          824..922
                     /region_name="Papilin_u7"
                     /note="Linking region between Kunitz_BPTI and I-set on
                     papilin; pfam16626"
                     /db_xref="CDD:374683"
     Region          932..>995
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          944..948
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          957..961
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          978..982
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1066..1133
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          1078..1082
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1091..1095
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1112..1116
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1126..1131
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1152..1236
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          1167..1171
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1179..1183
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1202..1206
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1216..1221
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1229..1232
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1252..1284
                     /region_name="PLAC"
                     /note="PLAC (protease and lacunin) domain; pfam08686"
                     /db_xref="CDD:462560"
     CDS             1..1300
                     /gene="PAPLN"
                     /coded_by="XM_061156719.1:59..3961"
                     /db_xref="GeneID:133066049"
ORIGIN      
        1 mrlllllvpl llapvpgssa pqvrrqsdtw gswgnwspcs rtcgggvsfr erlcytqrrd
       61 ggsscvgptr shrscrtesc pdgardfrae qcaefdsqef qgrrykwlpy ygapnkceln
      121 cipkgesfyy khkeavvdgt pcepgkrdic vdgscrvvgc dhhldslkqe dkclqcggdg
      181 ttcypvtgvf eandlsrgyn qilivpvgat sirieeaaas rnflavksir geyylnghwt
      241 iedaralpva stllhyerga egdlaperlh argptseplv ielisqepnp gvrfeyhlpl
      301 gaprpgfsws hsswgdcsae cgggqqtrwv fctmddevyp ehlcqsqprp adrrpcssqp
      361 cphtkrtsyl hrprawhlag aqrmcrsswk tgpwtlcsas cgggfqsrsv ycvsfdgaga
      421 qeaaedaece glpekppgrq acnlqrcagw svepwsecsv scgagvrrrs vtcrgdegsl
      481 lhttacsled rppltepcvr dhcpllsdqa whvgawglcs kscrsgtrrr qvvcalgppg
      541 hcgslqpskp aaveacntqp cdlppevpsm pevhtsprdp rmslgpreas asdfrdqwwa
      601 pqeqpsawgn prgdqsppvs apgpapslql ssygqplqpg sgphdcrqss hgccpdghta
      661 slgpqwqgcp gaslcqqsrf gccpdgvtva egphqagcts fhrrddaggr pgsraaasav
      721 psahrpqaqq nepsecrgsq fgccydhvas aagplgegcv gqpssaypvr cllpsahgsc
      781 tdwaarwyfv asvgqcnrfw yggchgnann faseeecvsa crgpqpgart sgqsthgdgg
      841 gsgpggqqea gqqepsqhgp gpvvqrrplp sgglwwrdqe pglgvmdhrq afgegpwgqe
      901 tgpsppglsg dagrpappsr gssyritlag sepsvvqaal gqlvrlfcse dgspgphsrw
      961 qkdgrpvssd rhqlqsdgsl visplradda gtyscgspgp dhhsqqvqlr vtaggdvavp
     1021 seaeprpfpe trdpaqdhrp rdpslggpat ashpwpltrv rldrsqpgvl daqpgqrvrl
     1081 tcraegfppp tiewqrdgqp lssprhqlqs dgslvisrva vedggfytcv afnghdrdqr
     1141 wvqlrvlgel titglpstma vqegdtarll cvvagesvni rwsrnglpvr adghrvhqsp
     1201 dgtllihnlr ardegsytcs ayrgsqavsr stevkvvppa latqprdpsr dcvdqpelan
     1261 cdlilqarlc gneyyssfcc ascsrvqppa qpvwqqghss
//
LOCUS       XP_061012703            1118 aa            linear   MAM 02-DEC-2023
DEFINITION  papilin isoform X5 [Dama dama].
ACCESSION   XP_061012703
VERSION     XP_061012703.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156720.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1118
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1118
                     /product="papilin isoform X5"
                     /calculated_mol_wt=119620
     Region          83..134
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          139..236
                     /region_name="ADAMTS_CR_3"
                     /note="ADAMTS cysteine-rich domain; pfam19236"
                     /db_xref="CDD:437068"
     Region          238..352
                     /region_name="ADAMTS_spacer1"
                     /note="ADAM-TS Spacer 1; pfam05986"
                     /db_xref="CDD:461796"
     Region          362..414
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          442..500
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          503..556
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          564..614
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          824..874
                     /region_name="Kunitz_papilin"
                     /note="Kunitz domain of papilin, and similar proteins;
                     cd22635"
                     /db_xref="CDD:438678"
     Region          877..975
                     /region_name="Papilin_u7"
                     /note="Linking region between Kunitz_BPTI and I-set on
                     papilin; pfam16626"
                     /db_xref="CDD:374683"
     Region          985..>1048
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          997..1001
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1010..1014
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1031..1035
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..1118
                     /gene="PAPLN"
                     /coded_by="XM_061156720.1:483..3839"
                     /db_xref="GeneID:133066049"
ORIGIN      
        1 mgerifpfle rfgviplpfl cqalslckns htspggpsct aavsplfrig ptemrlllll
       61 vplllapvpg ssapqvrrqs dtwgswgnws pcsrtcgggv sfrerlcytq rrdggsscvg
      121 ptrshrscrt escpdgardf raeqcaefds qefqgrrykw lpyygapnkc elncipkges
      181 fyykhkeavv dgtpcepgkr dicvdgscrv vgcdhhldsl kqedkclqcg gdgttcypvt
      241 gvfeandlsr gynqilivpv gatsirieea aasrnflavk sirgeyylng hwtiedaral
      301 pvastllhye rgaegdlape rlhargptse plvielisqe pnpgvrfeyh lplgaprpgf
      361 swshsswgdc saecgggqqt rwvfctmdde vypehlcqsq prpadrrpcs sqpcphtkrt
      421 sylhrprawh lagaqrmcrs swktgpwtlc sascgggfqs rsvycvsfdg agaqeaaeda
      481 eceglpekpp grqacnlqrc agwsvepwse csvscgagvr rrsvtcrgde gsllhttacs
      541 ledrppltep cvrdhcplls dqawhvgawg lcskscrsgt rrrqvvcalg ppghcgslqp
      601 skpaaveacn tqpcdlppev psmpevhtsp rdprmslgpr easasdfrdq wwapqeqpsa
      661 wgnprgdqsp pvsapgpaps lqlssygqpl qpgsgphdcr qsshgccpdg htaslgpqwq
      721 gcpgaslcqq srfgccpdgv tvaegphqag ctsfhrrdda ggrpgsraaa savpsahrpq
      781 aqqnepsecr gsqfgccydh vasaagplge gcvgqpssay pvrcllpsah gsctdwaarw
      841 yfvasvgqcn rfwyggchgn annfaseeec vsacrgpqpg artsgqsthg dgggsgpggq
      901 qeagqqepsq hgpgpvvqrr plpsgglwwr dqepglgvmd hrqafgegpw gqetgpsppg
      961 lsgdagrpap psrgssyrit lagsepsvvq aalgqlvrlf csedgspgph srwqkdgrpv
     1021 ssdrhqlqsd gslvisplra ddagtyscgs pgpdhhsqqv qlrvtglvpt sphhqgvtwp
     1081 cllrlnrgps prpgtqprtt glgtpasgap ppprtrgp
//
LOCUS       XP_061012704            1118 aa            linear   MAM 02-DEC-2023
DEFINITION  papilin isoform X6 [Dama dama].
ACCESSION   XP_061012704
VERSION     XP_061012704.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156721.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1118
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1118
                     /product="papilin isoform X6"
                     /calculated_mol_wt=119625
     Region          83..134
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          139..236
                     /region_name="ADAMTS_CR_3"
                     /note="ADAMTS cysteine-rich domain; pfam19236"
                     /db_xref="CDD:437068"
     Region          238..352
                     /region_name="ADAMTS_spacer1"
                     /note="ADAM-TS Spacer 1; pfam05986"
                     /db_xref="CDD:461796"
     Region          362..414
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          442..500
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          503..556
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          564..614
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          824..874
                     /region_name="Kunitz_papilin"
                     /note="Kunitz domain of papilin, and similar proteins;
                     cd22635"
                     /db_xref="CDD:438678"
     Region          877..975
                     /region_name="Papilin_u7"
                     /note="Linking region between Kunitz_BPTI and I-set on
                     papilin; pfam16626"
                     /db_xref="CDD:374683"
     Region          985..>1048
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          997..1001
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1010..1014
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1031..1035
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..1118
                     /gene="PAPLN"
                     /coded_by="XM_061156721.1:483..3839"
                     /db_xref="GeneID:133066049"
ORIGIN      
        1 mgerifpfle rfgviplpfl cqalslckns htspggpsct aavsplfrig ptemrlllll
       61 vplllapvpg ssapqvrrqs dtwgswgnws pcsrtcgggv sfrerlcytq rrdggsscvg
      121 ptrshrscrt escpdgardf raeqcaefds qefqgrrykw lpyygapnkc elncipkges
      181 fyykhkeavv dgtpcepgkr dicvdgscrv vgcdhhldsl kqedkclqcg gdgttcypvt
      241 gvfeandlsr gynqilivpv gatsirieea aasrnflavk sirgeyylng hwtiedaral
      301 pvastllhye rgaegdlape rlhargptse plvielisqe pnpgvrfeyh lplgaprpgf
      361 swshsswgdc saecgggqqt rwvfctmdde vypehlcqsq prpadrrpcs sqpcphtkrt
      421 sylhrprawh lagaqrmcrs swktgpwtlc sascgggfqs rsvycvsfdg agaqeaaeda
      481 eceglpekpp grqacnlqrc agwsvepwse csvscgagvr rrsvtcrgde gsllhttacs
      541 ledrppltep cvrdhcplls dqawhvgawg lcskscrsgt rrrqvvcalg ppghcgslqp
      601 skpaaveacn tqpcdlppev psmpevhtsp rdprmslgpr easasdfrdq wwapqeqpsa
      661 wgnprgdqsp pvsapgpaps lqlssygqpl qpgsgphdcr qsshgccpdg htaslgpqwq
      721 gcpgaslcqq srfgccpdgv tvaegphqag ctsfhrrdda ggrpgsraaa savpsahrpq
      781 aqqnepsecr gsqfgccydh vasaagplge gcvgqpssay pvrcllpsah gsctdwaarw
      841 yfvasvgqcn rfwyggchgn annfaseeec vsacrgpqpg artsgqsthg dgggsgpggq
      901 qeagqqepsq hgpgpvvqrr plpsgglwwr dqepglgvmd hrqafgegpw gqetgpsppg
      961 lsgdagrpap psrgssyrit lagsepsvvq aalgqlvrlf csedgspgph srwqkdgrpv
     1021 ssdrhqlqsd gslvisplra ddagtyscgs pgpdhhsqqv qlrvtahpll lasqqgvtwp
     1081 cllrlnrgps prpgtqprtt glgtpasgap ppprtrgp
//
LOCUS       XP_061012705            1117 aa            linear   MAM 02-DEC-2023
DEFINITION  papilin isoform X7 [Dama dama].
ACCESSION   XP_061012705
VERSION     XP_061012705.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156722.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1117
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1117
                     /product="papilin isoform X7"
                     /calculated_mol_wt=119492
     Region          83..134
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          139..236
                     /region_name="ADAMTS_CR_3"
                     /note="ADAMTS cysteine-rich domain; pfam19236"
                     /db_xref="CDD:437068"
     Region          238..352
                     /region_name="ADAMTS_spacer1"
                     /note="ADAM-TS Spacer 1; pfam05986"
                     /db_xref="CDD:461796"
     Region          362..414
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          442..500
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          503..556
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          564..614
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          824..874
                     /region_name="Kunitz_papilin"
                     /note="Kunitz domain of papilin, and similar proteins;
                     cd22635"
                     /db_xref="CDD:438678"
     Region          877..975
                     /region_name="Papilin_u7"
                     /note="Linking region between Kunitz_BPTI and I-set on
                     papilin; pfam16626"
                     /db_xref="CDD:374683"
     Region          985..>1048
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          997..1001
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1010..1014
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1031..1035
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..1117
                     /gene="PAPLN"
                     /coded_by="XM_061156722.1:483..3836"
                     /db_xref="GeneID:133066049"
ORIGIN      
        1 mgerifpfle rfgviplpfl cqalslckns htspggpsct aavsplfrig ptemrlllll
       61 vplllapvpg ssapqvrrqs dtwgswgnws pcsrtcgggv sfrerlcytq rrdggsscvg
      121 ptrshrscrt escpdgardf raeqcaefds qefqgrrykw lpyygapnkc elncipkges
      181 fyykhkeavv dgtpcepgkr dicvdgscrv vgcdhhldsl kqedkclqcg gdgttcypvt
      241 gvfeandlsr gynqilivpv gatsirieea aasrnflavk sirgeyylng hwtiedaral
      301 pvastllhye rgaegdlape rlhargptse plvielisqe pnpgvrfeyh lplgaprpgf
      361 swshsswgdc saecgggqqt rwvfctmdde vypehlcqsq prpadrrpcs sqpcphtkrt
      421 sylhrprawh lagaqrmcrs swktgpwtlc sascgggfqs rsvycvsfdg agaqeaaeda
      481 eceglpekpp grqacnlqrc agwsvepwse csvscgagvr rrsvtcrgde gsllhttacs
      541 ledrppltep cvrdhcplls dqawhvgawg lcskscrsgt rrrqvvcalg ppghcgslqp
      601 skpaaveacn tqpcdlppev psmpevhtsp rdprmslgpr easasdfrdq wwapqeqpsa
      661 wgnprgdqsp pvsapgpaps lqlssygqpl qpgsgphdcr qsshgccpdg htaslgpqwq
      721 gcpgaslcqq srfgccpdgv tvaegphqag ctsfhrrdda ggrpgsraaa savpsahrpq
      781 aqqnepsecr gsqfgccydh vasaagplge gcvgqpssay pvrcllpsah gsctdwaarw
      841 yfvasvgqcn rfwyggchgn annfaseeec vsacrgpqpg artsgqsthg dgggsgpggq
      901 qeagqqepsq hgpgpvvqrr plpsgglwwr dqepglgvmd hrqafgegpw gqetgpsppg
      961 lsgdagrpap psrgssyrit lagsepsvvq aalgqlvrlf csedgspgph srwqkdgrpv
     1021 ssdrhqlqsd gslvisplra ddagtyscgs pgpdhhsqqv qlrvtglvpt sphhgvtwpc
     1081 llrlnrgpsp rpgtqprttg lgtpasgapp pprtrgp
//
LOCUS       XP_061012706            1085 aa            linear   MAM 02-DEC-2023
DEFINITION  papilin isoform X8 [Dama dama].
ACCESSION   XP_061012706
VERSION     XP_061012706.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156723.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1085
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1085
                     /product="papilin isoform X8"
                     /calculated_mol_wt=116363
     Region          83..134
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          139..236
                     /region_name="ADAMTS_CR_3"
                     /note="ADAMTS cysteine-rich domain; pfam19236"
                     /db_xref="CDD:437068"
     Region          238..352
                     /region_name="ADAMTS_spacer1"
                     /note="ADAM-TS Spacer 1; pfam05986"
                     /db_xref="CDD:461796"
     Region          362..414
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          442..500
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          503..556
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          564..614
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          824..874
                     /region_name="Kunitz_papilin"
                     /note="Kunitz domain of papilin, and similar proteins;
                     cd22635"
                     /db_xref="CDD:438678"
     Region          877..975
                     /region_name="Papilin_u7"
                     /note="Linking region between Kunitz_BPTI and I-set on
                     papilin; pfam16626"
                     /db_xref="CDD:374683"
     Region          985..>1048
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          997..1001
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1010..1014
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1031..1035
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..1085
                     /gene="PAPLN"
                     /coded_by="XM_061156723.1:483..3740"
                     /db_xref="GeneID:133066049"
ORIGIN      
        1 mgerifpfle rfgviplpfl cqalslckns htspggpsct aavsplfrig ptemrlllll
       61 vplllapvpg ssapqvrrqs dtwgswgnws pcsrtcgggv sfrerlcytq rrdggsscvg
      121 ptrshrscrt escpdgardf raeqcaefds qefqgrrykw lpyygapnkc elncipkges
      181 fyykhkeavv dgtpcepgkr dicvdgscrv vgcdhhldsl kqedkclqcg gdgttcypvt
      241 gvfeandlsr gynqilivpv gatsirieea aasrnflavk sirgeyylng hwtiedaral
      301 pvastllhye rgaegdlape rlhargptse plvielisqe pnpgvrfeyh lplgaprpgf
      361 swshsswgdc saecgggqqt rwvfctmdde vypehlcqsq prpadrrpcs sqpcphtkrt
      421 sylhrprawh lagaqrmcrs swktgpwtlc sascgggfqs rsvycvsfdg agaqeaaeda
      481 eceglpekpp grqacnlqrc agwsvepwse csvscgagvr rrsvtcrgde gsllhttacs
      541 ledrppltep cvrdhcplls dqawhvgawg lcskscrsgt rrrqvvcalg ppghcgslqp
      601 skpaaveacn tqpcdlppev psmpevhtsp rdprmslgpr easasdfrdq wwapqeqpsa
      661 wgnprgdqsp pvsapgpaps lqlssygqpl qpgsgphdcr qsshgccpdg htaslgpqwq
      721 gcpgaslcqq srfgccpdgv tvaegphqag ctsfhrrdda ggrpgsraaa savpsahrpq
      781 aqqnepsecr gsqfgccydh vasaagplge gcvgqpssay pvrcllpsah gsctdwaarw
      841 yfvasvgqcn rfwyggchgn annfaseeec vsacrgpqpg artsgqsthg dgggsgpggq
      901 qeagqqepsq hgpgpvvqrr plpsgglwwr dqepglgvmd hrqafgegpw gqetgpsppg
      961 lsgdagrpap psrgssyrit lagsepsvvq aalgqlvrlf csedgspgph srwqkdgrpv
     1021 ssdrhqlqsd gslvisplra ddagtyscgs pgpdhhsqqv qlrvtglvpt sphhltpcfw
     1081 phsrg
//
LOCUS       XP_061012707             666 aa            linear   MAM 02-DEC-2023
DEFINITION  protein numb homolog isoform X1 [Dama dama].
ACCESSION   XP_061012707
VERSION     XP_061012707.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156724.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..666
                     /product="protein numb homolog isoform X1"
                     /calculated_mol_wt=72231
     Region          36..181
                     /region_name="PTB_Numb"
                     /note="Numb Phosphotyrosine-binding (PTB) domain; cd01268"
                     /db_xref="CDD:241298"
     Site            order(55,138,158)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:241298"
     Site            order(68,129..132,168,172,175,179)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:241298"
     Region          271..351
                     /region_name="NumbF"
                     /note="NUMB domain; pfam06311"
                     /db_xref="CDD:461874"
     Region          <352..597
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..666
                     /gene="NUMB"
                     /coded_by="XM_061156724.1:446..2446"
                     /db_xref="GeneID:133066050"
ORIGIN      
        1 mllnrklklv kikmnklrqs frrkkdvyvp easrphqwqt deegvrtgkc sfpvkylghv
       61 evdesrgmhi cedavkrlka erkffkgffg ktgkkavkav lwvsadglrv vdektkdliv
      121 dqtiekvsfc apdrnfdraf syicrdgttr rwichcfmav kdtgerlsha vgcafaacle
      181 rkqkrekecg vtatfdasrt tftregsfrv ttateqaere eimkqiqdak kadtdktavg
      241 ssvapgniat spssptsptl dataslemnn phaiprrhap ieqlarqgsf rgfpalsqkm
      301 spfkrqlslr inelpstmqr ktdfpikhtv pevegeaesi sslcsqitna fstpsedpfs
      361 sapmtkpvtv vapqspafqa ngtdsafhvl aakpaptala pvampvretn pwayapdaan
      421 kgiaathsgt ewgqssgavs pglfqaghrr tpseadrwle evsksvraqq pqasaaplqp
      481 vlqpppptai sqpvppfqgn afltsqpvpv gvvpplqpaf vpaqsypvpn gmtypapnvp
      541 vvgitpsqmv anvfgtaghp qaaqphqsps lvkqqtfpqy etssataspf fkppaqhlng
      601 saalngvddg rlasgdkqte apagtctvdp feaqwaales kskqrtnpsp tnpfssdlqk
      661 tfeiel
//
LOCUS       XP_061012708             666 aa            linear   MAM 02-DEC-2023
DEFINITION  protein numb homolog isoform X1 [Dama dama].
ACCESSION   XP_061012708
VERSION     XP_061012708.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156725.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..666
                     /product="protein numb homolog isoform X1"
                     /calculated_mol_wt=72231
     Region          36..181
                     /region_name="PTB_Numb"
                     /note="Numb Phosphotyrosine-binding (PTB) domain; cd01268"
                     /db_xref="CDD:241298"
     Site            order(55,138,158)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:241298"
     Site            order(68,129..132,168,172,175,179)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:241298"
     Region          271..351
                     /region_name="NumbF"
                     /note="NUMB domain; pfam06311"
                     /db_xref="CDD:461874"
     Region          <352..597
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..666
                     /gene="NUMB"
                     /coded_by="XM_061156725.1:348..2348"
                     /db_xref="GeneID:133066050"
ORIGIN      
        1 mllnrklklv kikmnklrqs frrkkdvyvp easrphqwqt deegvrtgkc sfpvkylghv
       61 evdesrgmhi cedavkrlka erkffkgffg ktgkkavkav lwvsadglrv vdektkdliv
      121 dqtiekvsfc apdrnfdraf syicrdgttr rwichcfmav kdtgerlsha vgcafaacle
      181 rkqkrekecg vtatfdasrt tftregsfrv ttateqaere eimkqiqdak kadtdktavg
      241 ssvapgniat spssptsptl dataslemnn phaiprrhap ieqlarqgsf rgfpalsqkm
      301 spfkrqlslr inelpstmqr ktdfpikhtv pevegeaesi sslcsqitna fstpsedpfs
      361 sapmtkpvtv vapqspafqa ngtdsafhvl aakpaptala pvampvretn pwayapdaan
      421 kgiaathsgt ewgqssgavs pglfqaghrr tpseadrwle evsksvraqq pqasaaplqp
      481 vlqpppptai sqpvppfqgn afltsqpvpv gvvpplqpaf vpaqsypvpn gmtypapnvp
      541 vvgitpsqmv anvfgtaghp qaaqphqsps lvkqqtfpqy etssataspf fkppaqhlng
      601 saalngvddg rlasgdkqte apagtctvdp feaqwaales kskqrtnpsp tnpfssdlqk
      661 tfeiel
//
LOCUS       XP_061012709             666 aa            linear   MAM 02-DEC-2023
DEFINITION  protein numb homolog isoform X1 [Dama dama].
ACCESSION   XP_061012709
VERSION     XP_061012709.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156726.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..666
                     /product="protein numb homolog isoform X1"
                     /calculated_mol_wt=72231
     Region          36..181
                     /region_name="PTB_Numb"
                     /note="Numb Phosphotyrosine-binding (PTB) domain; cd01268"
                     /db_xref="CDD:241298"
     Site            order(55,138,158)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:241298"
     Site            order(68,129..132,168,172,175,179)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:241298"
     Region          271..351
                     /region_name="NumbF"
                     /note="NUMB domain; pfam06311"
                     /db_xref="CDD:461874"
     Region          <352..597
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..666
                     /gene="NUMB"
                     /coded_by="XM_061156726.1:280..2280"
                     /db_xref="GeneID:133066050"
ORIGIN      
        1 mllnrklklv kikmnklrqs frrkkdvyvp easrphqwqt deegvrtgkc sfpvkylghv
       61 evdesrgmhi cedavkrlka erkffkgffg ktgkkavkav lwvsadglrv vdektkdliv
      121 dqtiekvsfc apdrnfdraf syicrdgttr rwichcfmav kdtgerlsha vgcafaacle
      181 rkqkrekecg vtatfdasrt tftregsfrv ttateqaere eimkqiqdak kadtdktavg
      241 ssvapgniat spssptsptl dataslemnn phaiprrhap ieqlarqgsf rgfpalsqkm
      301 spfkrqlslr inelpstmqr ktdfpikhtv pevegeaesi sslcsqitna fstpsedpfs
      361 sapmtkpvtv vapqspafqa ngtdsafhvl aakpaptala pvampvretn pwayapdaan
      421 kgiaathsgt ewgqssgavs pglfqaghrr tpseadrwle evsksvraqq pqasaaplqp
      481 vlqpppptai sqpvppfqgn afltsqpvpv gvvpplqpaf vpaqsypvpn gmtypapnvp
      541 vvgitpsqmv anvfgtaghp qaaqphqsps lvkqqtfpqy etssataspf fkppaqhlng
      601 saalngvddg rlasgdkqte apagtctvdp feaqwaales kskqrtnpsp tnpfssdlqk
      661 tfeiel
//
LOCUS       XP_061012710             666 aa            linear   MAM 02-DEC-2023
DEFINITION  protein numb homolog isoform X1 [Dama dama].
ACCESSION   XP_061012710
VERSION     XP_061012710.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156727.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..666
                     /product="protein numb homolog isoform X1"
                     /calculated_mol_wt=72231
     Region          36..181
                     /region_name="PTB_Numb"
                     /note="Numb Phosphotyrosine-binding (PTB) domain; cd01268"
                     /db_xref="CDD:241298"
     Site            order(55,138,158)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:241298"
     Site            order(68,129..132,168,172,175,179)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:241298"
     Region          271..351
                     /region_name="NumbF"
                     /note="NUMB domain; pfam06311"
                     /db_xref="CDD:461874"
     Region          <352..597
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..666
                     /gene="NUMB"
                     /coded_by="XM_061156727.1:279..2279"
                     /db_xref="GeneID:133066050"
ORIGIN      
        1 mllnrklklv kikmnklrqs frrkkdvyvp easrphqwqt deegvrtgkc sfpvkylghv
       61 evdesrgmhi cedavkrlka erkffkgffg ktgkkavkav lwvsadglrv vdektkdliv
      121 dqtiekvsfc apdrnfdraf syicrdgttr rwichcfmav kdtgerlsha vgcafaacle
      181 rkqkrekecg vtatfdasrt tftregsfrv ttateqaere eimkqiqdak kadtdktavg
      241 ssvapgniat spssptsptl dataslemnn phaiprrhap ieqlarqgsf rgfpalsqkm
      301 spfkrqlslr inelpstmqr ktdfpikhtv pevegeaesi sslcsqitna fstpsedpfs
      361 sapmtkpvtv vapqspafqa ngtdsafhvl aakpaptala pvampvretn pwayapdaan
      421 kgiaathsgt ewgqssgavs pglfqaghrr tpseadrwle evsksvraqq pqasaaplqp
      481 vlqpppptai sqpvppfqgn afltsqpvpv gvvpplqpaf vpaqsypvpn gmtypapnvp
      541 vvgitpsqmv anvfgtaghp qaaqphqsps lvkqqtfpqy etssataspf fkppaqhlng
      601 saalngvddg rlasgdkqte apagtctvdp feaqwaales kskqrtnpsp tnpfssdlqk
      661 tfeiel
//
LOCUS       XP_061012711             663 aa            linear   MAM 02-DEC-2023
DEFINITION  protein numb homolog isoform X2 [Dama dama].
ACCESSION   XP_061012711
VERSION     XP_061012711.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156728.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..663
                     /product="protein numb homolog isoform X2"
                     /calculated_mol_wt=71944
     Region          36..181
                     /region_name="PTB_Numb"
                     /note="Numb Phosphotyrosine-binding (PTB) domain; cd01268"
                     /db_xref="CDD:241298"
     Site            order(55,138,158)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:241298"
     Site            order(68,129..132,168,172,175,179)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:241298"
     Region          268..348
                     /region_name="NumbF"
                     /note="NUMB domain; pfam06311"
                     /db_xref="CDD:461874"
     Region          <331..627
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     CDS             1..663
                     /gene="NUMB"
                     /coded_by="XM_061156728.1:446..2437"
                     /db_xref="GeneID:133066050"
ORIGIN      
        1 mllnrklklv kikmnklrqs frrkkdvyvp easrphqwqt deegvrtgkc sfpvkylghv
       61 evdesrgmhi cedavkrlka erkffkgffg ktgkkavkav lwvsadglrv vdektkdliv
      121 dqtiekvsfc apdrnfdraf syicrdgttr rwichcfmav kdtgerlsha vgcafaacle
      181 rkqkrekecg vtatfdasrt tftregsfrv ttateqaere eimkqiqdak kdktavgssv
      241 apgniatsps sptsptldat aslemnnpha iprrhapieq larqgsfrgf palsqkmspf
      301 krqlslrine lpstmqrktd fpikhtvpev egeaesissl csqitnafst psedpfssap
      361 mtkpvtvvap qspafqangt dsafhvlaak paptalapva mpvretnpwa yapdaankgi
      421 aathsgtewg qssgavspgl fqaghrrtps eadrwleevs ksvraqqpqa saaplqpvlq
      481 pppptaisqp vppfqgnafl tsqpvpvgvv pplqpafvpa qsypvpngmt ypapnvpvvg
      541 itpsqmvanv fgtaghpqaa qphqspslvk qqtfpqyets sataspffkp paqhlngsaa
      601 lngvddgrla sgdkqteapa gtctvdpfea qwaalesksk qrtnpsptnp fssdlqktfe
      661 iel
//
LOCUS       XP_061012712             655 aa            linear   MAM 02-DEC-2023
DEFINITION  protein numb homolog isoform X3 [Dama dama].
ACCESSION   XP_061012712
VERSION     XP_061012712.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156729.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..655
                     /product="protein numb homolog isoform X3"
                     /calculated_mol_wt=70859
     Region          36..170
                     /region_name="PTB_Numb"
                     /note="Numb Phosphotyrosine-binding (PTB) domain; cd01268"
                     /db_xref="CDD:241298"
     Site            order(55,127,147)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:241298"
     Site            order(68,118..121,157,161,164,168)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:241298"
     Region          260..340
                     /region_name="NumbF"
                     /note="NUMB domain; pfam06311"
                     /db_xref="CDD:461874"
     CDS             1..655
                     /gene="NUMB"
                     /coded_by="XM_061156729.1:446..2413"
                     /db_xref="GeneID:133066050"
ORIGIN      
        1 mllnrklklv kikmnklrqs frrkkdvyvp easrphqwqt deegvrtgkc sfpvkylghv
       61 evdesrgmhi cedavkrlka tgkkavkavl wvsadglrvv dektkdlivd qtiekvsfca
      121 pdrnfdrafs yicrdgttrr wichcfmavk dtgerlshav gcafaacler kqkrekecgv
      181 tatfdasrtt ftregsfrvt tateqaeree imkqiqdakk adtdktavgs svapgniats
      241 pssptsptld ataslemnnp haiprrhapi eqlarqgsfr gfpalsqkms pfkrqlslri
      301 nelpstmqrk tdfpikhtvp evegeaesis slcsqitnaf stpsedpfss apmtkpvtvv
      361 apqspafqan gtdsafhvla akpaptalap vampvretnp wayapdaank giaathsgte
      421 wgqssgavsp glfqaghrrt pseadrwlee vsksvraqqp qasaaplqpv lqpppptais
      481 qpvppfqgna fltsqpvpvg vvpplqpafv paqsypvpng mtypapnvpv vgitpsqmva
      541 nvfgtaghpq aaqphqspsl vkqqtfpqye tssataspff kppaqhlngs aalngvddgr
      601 lasgdkqtea pagtctvdpf eaqwaalesk skqrtnpspt npfssdlqkt feiel
//
LOCUS       XP_061012713             653 aa            linear   MAM 02-DEC-2023
DEFINITION  protein numb homolog isoform X4 [Dama dama].
ACCESSION   XP_061012713
VERSION     XP_061012713.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156730.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..653
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..653
                     /product="protein numb homolog isoform X4"
                     /calculated_mol_wt=70652
     Region          23..168
                     /region_name="PTB_Numb"
                     /note="Numb Phosphotyrosine-binding (PTB) domain; cd01268"
                     /db_xref="CDD:241298"
     Site            order(42,125,145)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:241298"
     Site            order(55,116..119,155,159,162,166)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:241298"
     Region          258..338
                     /region_name="NumbF"
                     /note="NUMB domain; pfam06311"
                     /db_xref="CDD:461874"
     CDS             1..653
                     /gene="NUMB"
                     /coded_by="XM_061156730.1:420..2381"
                     /db_xref="GeneID:133066050"
ORIGIN      
        1 mnklrqsfrr kkdvyvpeas rphqwqtdee gvrtgkcsfp vkylghvevd esrgmhiced
       61 avkrlkaerk ffkgffgktg kkavkavlwv sadglrvvde ktkdlivdqt iekvsfcapd
      121 rnfdrafsyi crdgttrrwi chcfmavkdt gerlshavgc afaaclerkq krekecgvta
      181 tfdasrttft regsfrvtta teqaereeim kqiqdakkad tdktavgssv apgniatsps
      241 sptsptldat aslemnnpha iprrhapieq larqgsfrgf palsqkmspf krqlslrine
      301 lpstmqrktd fpikhtvpev egeaesissl csqitnafst psedpfssap mtkpvtvvap
      361 qspafqangt dsafhvlaak paptalapva mpvretnpwa yapdaankgi aathsgtewg
      421 qssgavspgl fqaghrrtps eadrwleevs ksvraqqpqa saaplqpvlq pppptaisqp
      481 vppfqgnafl tsqpvpvgvv pplqpafvpa qsypvpngmt ypapnvpvvg itpsqmvanv
      541 fgtaghpqaa qphqspslvk qqtfpqyets sataspffkp paqhlngsaa lngvddgrla
      601 sgdkqteapa gtctvdpfea qwaalesksk qrtnpsptnp fssdlqktfe iel
//
LOCUS       XP_061012714             653 aa            linear   MAM 02-DEC-2023
DEFINITION  protein numb homolog isoform X4 [Dama dama].
ACCESSION   XP_061012714
VERSION     XP_061012714.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156731.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..653
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..653
                     /product="protein numb homolog isoform X4"
                     /calculated_mol_wt=70652
     Region          23..168
                     /region_name="PTB_Numb"
                     /note="Numb Phosphotyrosine-binding (PTB) domain; cd01268"
                     /db_xref="CDD:241298"
     Site            order(42,125,145)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:241298"
     Site            order(55,116..119,155,159,162,166)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:241298"
     Region          258..338
                     /region_name="NumbF"
                     /note="NUMB domain; pfam06311"
                     /db_xref="CDD:461874"
     CDS             1..653
                     /gene="NUMB"
                     /coded_by="XM_061156731.1:335..2296"
                     /db_xref="GeneID:133066050"
ORIGIN      
        1 mnklrqsfrr kkdvyvpeas rphqwqtdee gvrtgkcsfp vkylghvevd esrgmhiced
       61 avkrlkaerk ffkgffgktg kkavkavlwv sadglrvvde ktkdlivdqt iekvsfcapd
      121 rnfdrafsyi crdgttrrwi chcfmavkdt gerlshavgc afaaclerkq krekecgvta
      181 tfdasrttft regsfrvtta teqaereeim kqiqdakkad tdktavgssv apgniatsps
      241 sptsptldat aslemnnpha iprrhapieq larqgsfrgf palsqkmspf krqlslrine
      301 lpstmqrktd fpikhtvpev egeaesissl csqitnafst psedpfssap mtkpvtvvap
      361 qspafqangt dsafhvlaak paptalapva mpvretnpwa yapdaankgi aathsgtewg
      421 qssgavspgl fqaghrrtps eadrwleevs ksvraqqpqa saaplqpvlq pppptaisqp
      481 vppfqgnafl tsqpvpvgvv pplqpafvpa qsypvpngmt ypapnvpvvg itpsqmvanv
      541 fgtaghpqaa qphqspslvk qqtfpqyets sataspffkp paqhlngsaa lngvddgrla
      601 sgdkqteapa gtctvdpfea qwaalesksk qrtnpsptnp fssdlqktfe iel
//
LOCUS       XP_061012715             652 aa            linear   MAM 02-DEC-2023
DEFINITION  protein numb homolog isoform X5 [Dama dama].
ACCESSION   XP_061012715
VERSION     XP_061012715.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156732.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..652
                     /product="protein numb homolog isoform X5"
                     /calculated_mol_wt=70571
     Region          36..170
                     /region_name="PTB_Numb"
                     /note="Numb Phosphotyrosine-binding (PTB) domain; cd01268"
                     /db_xref="CDD:241298"
     Site            order(55,127,147)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:241298"
     Site            order(68,118..121,157,161,164,168)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:241298"
     Region          257..337
                     /region_name="NumbF"
                     /note="NUMB domain; pfam06311"
                     /db_xref="CDD:461874"
     CDS             1..652
                     /gene="NUMB"
                     /coded_by="XM_061156732.1:446..2404"
                     /db_xref="GeneID:133066050"
ORIGIN      
        1 mllnrklklv kikmnklrqs frrkkdvyvp easrphqwqt deegvrtgkc sfpvkylghv
       61 evdesrgmhi cedavkrlka tgkkavkavl wvsadglrvv dektkdlivd qtiekvsfca
      121 pdrnfdrafs yicrdgttrr wichcfmavk dtgerlshav gcafaacler kqkrekecgv
      181 tatfdasrtt ftregsfrvt tateqaeree imkqiqdakk dktavgssva pgniatspss
      241 ptsptldata slemnnphai prrhapieql arqgsfrgfp alsqkmspfk rqlslrinel
      301 pstmqrktdf pikhtvpeve geaesisslc sqitnafstp sedpfssapm tkpvtvvapq
      361 spafqangtd safhvlaakp aptalapvam pvretnpway apdaankgia athsgtewgq
      421 ssgavspglf qaghrrtpse adrwleevsk svraqqpqas aaplqpvlqp ppptaisqpv
      481 ppfqgnaflt sqpvpvgvvp plqpafvpaq sypvpngmty papnvpvvgi tpsqmvanvf
      541 gtaghpqaaq phqspslvkq qtfpqyetss ataspffkpp aqhlngsaal ngvddgrlas
      601 gdkqteapag tctvdpfeaq waaleskskq rtnpsptnpf ssdlqktfei el
//
LOCUS       XP_061012717             617 aa            linear   MAM 02-DEC-2023
DEFINITION  protein numb homolog isoform X6 [Dama dama].
ACCESSION   XP_061012717
VERSION     XP_061012717.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156734.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..617
                     /product="protein numb homolog isoform X6"
                     /calculated_mol_wt=67308
     Region          36..181
                     /region_name="PTB_Numb"
                     /note="Numb Phosphotyrosine-binding (PTB) domain; cd01268"
                     /db_xref="CDD:241298"
     Site            order(55,138,158)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:241298"
     Site            order(68,129..132,168,172,175,179)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:241298"
     Region          271..351
                     /region_name="NumbF"
                     /note="NUMB domain; pfam06311"
                     /db_xref="CDD:461874"
     CDS             1..617
                     /gene="NUMB"
                     /coded_by="XM_061156734.1:446..2299"
                     /db_xref="GeneID:133066050"
ORIGIN      
        1 mllnrklklv kikmnklrqs frrkkdvyvp easrphqwqt deegvrtgkc sfpvkylghv
       61 evdesrgmhi cedavkrlka erkffkgffg ktgkkavkav lwvsadglrv vdektkdliv
      121 dqtiekvsfc apdrnfdraf syicrdgttr rwichcfmav kdtgerlsha vgcafaacle
      181 rkqkrekecg vtatfdasrt tftregsfrv ttateqaere eimkqiqdak kadtdktavg
      241 ssvapgniat spssptsptl dataslemnn phaiprrhap ieqlarqgsf rgfpalsqkm
      301 spfkrqlslr inelpstmqr ktdfpikhtv pevegeaesi sslcsqitna fstpsedpfs
      361 sapmtkpvtv vapqspafqg tewgqssgav spglfqaghr rtpseadrwl eevsksvraq
      421 qpqasaaplq pvlqppppta isqpvppfqg nafltsqpvp vgvvpplqpa fvpaqsypvp
      481 ngmtypapnv pvvgitpsqm vanvfgtagh pqaaqphqsp slvkqqtfpq yetssatasp
      541 ffkppaqhln gsaalngvdd grlasgdkqt eapagtctvd pfeaqwaale skskqrtnps
      601 ptnpfssdlq ktfeiel
//
LOCUS       XP_061012718             606 aa            linear   MAM 02-DEC-2023
DEFINITION  protein numb homolog isoform X7 [Dama dama].
ACCESSION   XP_061012718
VERSION     XP_061012718.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156735.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..606
                     /product="protein numb homolog isoform X7"
                     /calculated_mol_wt=65935
     Region          36..170
                     /region_name="PTB_Numb"
                     /note="Numb Phosphotyrosine-binding (PTB) domain; cd01268"
                     /db_xref="CDD:241298"
     Site            order(55,127,147)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:241298"
     Site            order(68,118..121,157,161,164,168)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:241298"
     Region          260..340
                     /region_name="NumbF"
                     /note="NUMB domain; pfam06311"
                     /db_xref="CDD:461874"
     CDS             1..606
                     /gene="NUMB"
                     /coded_by="XM_061156735.1:446..2266"
                     /db_xref="GeneID:133066050"
ORIGIN      
        1 mllnrklklv kikmnklrqs frrkkdvyvp easrphqwqt deegvrtgkc sfpvkylghv
       61 evdesrgmhi cedavkrlka tgkkavkavl wvsadglrvv dektkdlivd qtiekvsfca
      121 pdrnfdrafs yicrdgttrr wichcfmavk dtgerlshav gcafaacler kqkrekecgv
      181 tatfdasrtt ftregsfrvt tateqaeree imkqiqdakk adtdktavgs svapgniats
      241 pssptsptld ataslemnnp haiprrhapi eqlarqgsfr gfpalsqkms pfkrqlslri
      301 nelpstmqrk tdfpikhtvp evegeaesis slcsqitnaf stpsedpfss apmtkpvtvv
      361 apqspafqgt ewgqssgavs pglfqaghrr tpseadrwle evsksvraqq pqasaaplqp
      421 vlqpppptai sqpvppfqgn afltsqpvpv gvvpplqpaf vpaqsypvpn gmtypapnvp
      481 vvgitpsqmv anvfgtaghp qaaqphqsps lvkqqtfpqy etssataspf fkppaqhlng
      541 saalngvddg rlasgdkqte apagtctvdp feaqwaales kskqrtnpsp tnpfssdlqk
      601 tfeiel
//
LOCUS       XP_061012719             468 aa            linear   MAM 02-DEC-2023
DEFINITION  presenilin-1 isoform X1 [Dama dama].
ACCESSION   XP_061012719
VERSION     XP_061012719.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156736.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..468
                     /product="presenilin-1 isoform X1"
                     /calculated_mol_wt=52403
     Region          77..458
                     /region_name="Presenilin"
                     /note="pfam01080"
                     /db_xref="CDD:460052"
     CDS             1..468
                     /gene="PSEN1"
                     /coded_by="XM_061156736.1:273..1679"
                     /db_xref="GeneID:133066052"
ORIGIN      
        1 mtelpaplsy fqnaqmseds hlsntvrgqn dsrerpehgs errrrgntes vsngrapnss
       61 qqvveqeeee deeltlkyga khvimlfvpv tlcmvvvvat iksvsfytrk dgqliytpft
      121 edtetvgqra lhsilnavim isvivvmtil lvvlykyrcy kvihawlivs sllllfffsf
      181 iylgevfkty nvamdyisva lliwnfgvvg miaihwkgpl rlqqaylimi salmalvfik
      241 ylpewtawli lavisvydlv avlcpkgplr mlvetaqern etlfpaliys stmvwlvnma
      301 egdpeaqrkv sknsnynaqs tesesqdpvt esddggfsee weaqrdsrlg phhstaesrs
      361 avqdlsssil asedpeergv klglgdfify svlvgkasat asgdwnttia cfvailiglc
      421 ltllllaifk kalpalpvsi tfglifyfat dylvqpfmdq lafhqfyi
//
LOCUS       XP_061012720             468 aa            linear   MAM 02-DEC-2023
DEFINITION  presenilin-1 isoform X1 [Dama dama].
ACCESSION   XP_061012720
VERSION     XP_061012720.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156737.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..468
                     /product="presenilin-1 isoform X1"
                     /calculated_mol_wt=52403
     Region          77..458
                     /region_name="Presenilin"
                     /note="pfam01080"
                     /db_xref="CDD:460052"
     CDS             1..468
                     /gene="PSEN1"
                     /coded_by="XM_061156737.1:161..1567"
                     /db_xref="GeneID:133066052"
ORIGIN      
        1 mtelpaplsy fqnaqmseds hlsntvrgqn dsrerpehgs errrrgntes vsngrapnss
       61 qqvveqeeee deeltlkyga khvimlfvpv tlcmvvvvat iksvsfytrk dgqliytpft
      121 edtetvgqra lhsilnavim isvivvmtil lvvlykyrcy kvihawlivs sllllfffsf
      181 iylgevfkty nvamdyisva lliwnfgvvg miaihwkgpl rlqqaylimi salmalvfik
      241 ylpewtawli lavisvydlv avlcpkgplr mlvetaqern etlfpaliys stmvwlvnma
      301 egdpeaqrkv sknsnynaqs tesesqdpvt esddggfsee weaqrdsrlg phhstaesrs
      361 avqdlsssil asedpeergv klglgdfify svlvgkasat asgdwnttia cfvailiglc
      421 ltllllaifk kalpalpvsi tfglifyfat dylvqpfmdq lafhqfyi
//
LOCUS       XP_061012721             468 aa            linear   MAM 02-DEC-2023
DEFINITION  presenilin-1 isoform X1 [Dama dama].
ACCESSION   XP_061012721
VERSION     XP_061012721.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156738.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..468
                     /product="presenilin-1 isoform X1"
                     /calculated_mol_wt=52403
     Region          77..458
                     /region_name="Presenilin"
                     /note="pfam01080"
                     /db_xref="CDD:460052"
     CDS             1..468
                     /gene="PSEN1"
                     /coded_by="XM_061156738.1:269..1675"
                     /db_xref="GeneID:133066052"
ORIGIN      
        1 mtelpaplsy fqnaqmseds hlsntvrgqn dsrerpehgs errrrgntes vsngrapnss
       61 qqvveqeeee deeltlkyga khvimlfvpv tlcmvvvvat iksvsfytrk dgqliytpft
      121 edtetvgqra lhsilnavim isvivvmtil lvvlykyrcy kvihawlivs sllllfffsf
      181 iylgevfkty nvamdyisva lliwnfgvvg miaihwkgpl rlqqaylimi salmalvfik
      241 ylpewtawli lavisvydlv avlcpkgplr mlvetaqern etlfpaliys stmvwlvnma
      301 egdpeaqrkv sknsnynaqs tesesqdpvt esddggfsee weaqrdsrlg phhstaesrs
      361 avqdlsssil asedpeergv klglgdfify svlvgkasat asgdwnttia cfvailiglc
      421 ltllllaifk kalpalpvsi tfglifyfat dylvqpfmdq lafhqfyi
//
LOCUS       XP_061012722             464 aa            linear   MAM 02-DEC-2023
DEFINITION  presenilin-1 isoform X2 [Dama dama].
ACCESSION   XP_061012722
VERSION     XP_061012722.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156739.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..464
                     /product="presenilin-1 isoform X2"
                     /calculated_mol_wt=51962
     Region          73..454
                     /region_name="Presenilin"
                     /note="pfam01080"
                     /db_xref="CDD:460052"
     CDS             1..464
                     /gene="PSEN1"
                     /coded_by="XM_061156739.1:273..1667"
                     /db_xref="GeneID:133066052"
ORIGIN      
        1 mtelpaplsy fqnaqmseds hlsntndsre rpehgserrr rgntesvsng rapnssqqvv
       61 eqeeeedeel tlkygakhvi mlfvpvtlcm vvvvatiksv sfytrkdgql iytpftedte
      121 tvgqralhsi lnavimisvi vvmtillvvl ykyrcykvih awlivsslll lfffsfiylg
      181 evfktynvam dyisvalliw nfgvvgmiai hwkgplrlqq aylimisalm alvfikylpe
      241 wtawlilavi svydlvavlc pkgplrmlve taqernetlf paliysstmv wlvnmaegdp
      301 eaqrkvskns nynaqstese sqdpvtesdd ggfseeweaq rdsrlgphhs taesrsavqd
      361 lsssilased peergvklgl gdfifysvlv gkasatasgd wnttiacfva iliglcltll
      421 llaifkkalp alpvsitfgl ifyfatdylv qpfmdqlafh qfyi
//
LOCUS       XP_061012723             452 aa            linear   MAM 02-DEC-2023
DEFINITION  presenilin-1 isoform X3 [Dama dama].
ACCESSION   XP_061012723
VERSION     XP_061012723.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156740.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..452
                     /product="presenilin-1 isoform X3"
                     /calculated_mol_wt=51152
     Region          77..>378
                     /region_name="Presenilin"
                     /note="pfam01080"
                     /db_xref="CDD:460052"
     CDS             1..452
                     /gene="PSEN1"
                     /coded_by="XM_061156740.1:273..1631"
                     /db_xref="GeneID:133066052"
ORIGIN      
        1 mtelpaplsy fqnaqmseds hlsntvrgqn dsrerpehgs errrrgntes vsngrapnss
       61 qqvveqeeee deeltlkyga khvimlfvpv tlcmvvvvat iksvsfytrk dgqliytpft
      121 edtetvgqra lhsilnavim isvivvmtil lvvlykyrcy kvihawlivs sllllfffsf
      181 iylgevfkty nvamdyisva lliwnfgvvg miaihwkgpl rlqqaylimi salmalvfik
      241 ylpewtawli lavisvydlv avlcpkgplr mlvetaqern etlfpaliys stmvwlvnma
      301 egdpeaqrkv sknsnynaqs tesesqdpvt esddggfsee weaqrdsrlg phhstaesrs
      361 avqdlsssil asedpeerfv pyiiaprhfq esitssssly hlwayfllch rlscsalygp
      421 vsipsvlyla ylqleshgff afdynkiwgg qr
//
LOCUS       XP_061012724             843 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA-binding protein 25 [Dama dama].
ACCESSION   XP_061012724
VERSION     XP_061012724.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156741.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..843
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..843
                     /product="RNA-binding protein 25"
                     /calculated_mol_wt=100025
     Region          87..169
                     /region_name="RRM_RBM25"
                     /note="RNA recognition motif (RRM) found in eukaryotic
                     RNA-binding protein 25 and similar proteins; cd12446"
                     /db_xref="CDD:409880"
     Region          763..836
                     /region_name="PWI"
                     /note="domain in splicing factors; smart00311"
                     /db_xref="CDD:214609"
     CDS             1..843
                     /gene="RBM25"
                     /coded_by="XM_061156741.1:201..2732"
                     /db_xref="GeneID:133066053"
ORIGIN      
        1 msfpphlnrp pmgipalppg ipppqfpgfp ppvppgtpmi pvpmsimapa ptvlvptvsm
       61 vgkhlgarkd hpglkakend encgptttvf vgnisekasd mlirqllakc glvlswkrvq
      121 gasgklqafg fceykepest lralrllhdl qigekkllvk vdaktkaqld ewkakkkasn
      181 gnarpetvtn ddeealdeet krrdqmikga ievlireyss elnapsqesd shprkkkkek
      241 kedifrrfpv aplipyplit kedinaieme edkrdlisre iskfrdthkk leeekgkkek
      301 erqeiekerr ererererer errererere rererekeke rerererdrd rdrtkerdrd
      361 rdrerdrdrd rerssdrnkd rsrsreksrd rerererere rerererere rerererere
      421 rererekdkk rdreedeeda yerrklerkl rekeaayqer lknweirerk ktreyekeae
      481 reeerrrema keakrlkefl edydddrddp kyyrgsalqk rlrdrekeme aderdrkrek
      541 eeleeirqrl laeghpdpda elqrmeqeae rrrqpqikqe peseeeeeek qekeekreep
      601 meeeeepeqk pclkptlrpi ssapsvssas gnatpntpgd espcgiiiph enspdqqqpe
      661 ehrpkiglsl klgasnspgq pnsvkrkklp vdsvfnkfed edsddvprkr klvpldyged
      721 dknaakgtvn teekrkhiks liekiptakp elfaypldws ivdsilmerr irpwinkkii
      781 eyigeeeatl vdfvcskvma hsspqsildd vamvldeeae vfivkmwrll iyeteakkig
      841 lvk
//
LOCUS       XP_061012725             777 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger FYVE domain-containing protein 1 [Dama dama].
ACCESSION   XP_061012725
VERSION     XP_061012725.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156742.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..777
                     /product="zinc finger FYVE domain-containing protein 1"
                     /calculated_mol_wt=86824
     Region          16..63
                     /region_name="Bbox1_ZFYVE1_rpt1"
                     /note="first B-box-type 1 zinc finger found in zinc finger
                     FYVE domain-containing protein 1 (ZFYVE1) and similar
                     proteins; cd19819"
                     /db_xref="CDD:380877"
     Region          69..122
                     /region_name="Bbox1_ZFYVE1_rpt2"
                     /note="second B-box-type 1 zinc finger found in zinc
                     finger FYVE domain-containing protein 1 (ZFYVE1) and
                     similar proteins; cd19820"
                     /db_xref="CDD:380878"
     Region          174..410
                     /region_name="GBP"
                     /note="Guanylate-binding protein (GBP) family (N-terminal
                     domain); cd01851"
                     /db_xref="CDD:206650"
     Site            187..194
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206650"
     Site            order(189..195,210..212,217..218,238,331..332,376)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206650"
     Site            order(207..212,217..224)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206650"
     Site            218
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206650"
     Site            235..238
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206650"
     Site            order(237..241,251..257,260..262)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206650"
     Site            331..334
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206650"
     Site            374..376
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206650"
     Region          594..655
                     /region_name="FYVE_like_SF"
                     /note="FYVE domain like superfamily; cl28890"
                     /db_xref="CDD:333710"
     Site            order(616..621,626,649)
                     /site_type="other"
                     /note="phosphatidylinositol 3-phosphate binding site
                     [chemical binding]"
                     /db_xref="CDD:277249"
     Region          711..771
                     /region_name="FYVE_ZFYV1"
                     /note="FYVE domains found in zinc finger FYVE
                     domain-containing protein 1 (ZFYV1) and similar proteins;
                     cd15734"
                     /db_xref="CDD:277273"
     Site            order(712,715,733..738,740..741,765..767)
                     /site_type="other"
                     /note="putative phosphatidylinositol 3-phosphate binding
                     site [chemical binding]"
                     /db_xref="CDD:277273"
     CDS             1..777
                     /gene="ZFYVE1"
                     /coded_by="XM_061156742.1:684..3017"
                     /db_xref="GeneID:133066054"
ORIGIN      
        1 msaqtspaek glnpgllcqe sytcsgsdea vfecdeccsl qclrceeelh rqerlrnher
       61 irlkaghvpy cdpckgpngh spgvkqravv rcqtckinlc lecqkrthsg gnkrrhpvtv
      121 yhvtkvqell eeegmdeetk rkkmtekvvs fllvdeneei qvtneedfir kldckpdqhl
      181 kvvsifgntg dgkshtlnht ffygrevfkt spaqesctvg vwaaydpvhk vavidtegll
      241 gatvnlsqrt rlllkvlais dlviyrthad rlhndlfkfl gdaseaylkh ftkelkatta
      301 rcgldvplst lgpaviifhe tvhtqllgsd hpsevpekli qdrfrklgrf peafssihyk
      361 gtrtynpptd fsglrraleq qlennttrsp rhpgvifkal kalsdrfsge ipddqmahss
      421 ffpdeyftcs slclscgagc knsmnhgkeg vpheaksrcr yshqydnrvf tckacyergn
      481 evsvvpktaa stdspwmgla kyawsgyvie cpncgvvyrs rqywfgnqdp vdtvvrteiv
      541 hvwpgtdgfl kdnnnaaqrl ldgmnfmaqs vselslgptk avtswltdqi apaywrpnsq
      601 ilscnkcats fkdndtkhhc racgegfcds cssktrpvpe rgwgpapvrv cdncyearns
      661 qldvteaqgd deggtliark vgeavqntlg avvtaidipl glvkdaarpa ywvpdheilh
      721 chscrkefsv klskhhcrac gqgfcdecsh drravpsrgw dhpvrvcfnc nkkpgdl
//
LOCUS       XP_061012726             777 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger FYVE domain-containing protein 1 [Dama dama].
ACCESSION   XP_061012726
VERSION     XP_061012726.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156743.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..777
                     /product="zinc finger FYVE domain-containing protein 1"
                     /calculated_mol_wt=86824
     Region          16..63
                     /region_name="Bbox1_ZFYVE1_rpt1"
                     /note="first B-box-type 1 zinc finger found in zinc finger
                     FYVE domain-containing protein 1 (ZFYVE1) and similar
                     proteins; cd19819"
                     /db_xref="CDD:380877"
     Region          69..122
                     /region_name="Bbox1_ZFYVE1_rpt2"
                     /note="second B-box-type 1 zinc finger found in zinc
                     finger FYVE domain-containing protein 1 (ZFYVE1) and
                     similar proteins; cd19820"
                     /db_xref="CDD:380878"
     Region          174..410
                     /region_name="GBP"
                     /note="Guanylate-binding protein (GBP) family (N-terminal
                     domain); cd01851"
                     /db_xref="CDD:206650"
     Site            187..194
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206650"
     Site            order(189..195,210..212,217..218,238,331..332,376)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206650"
     Site            order(207..212,217..224)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206650"
     Site            218
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206650"
     Site            235..238
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206650"
     Site            order(237..241,251..257,260..262)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206650"
     Site            331..334
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206650"
     Site            374..376
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206650"
     Region          594..655
                     /region_name="FYVE_like_SF"
                     /note="FYVE domain like superfamily; cl28890"
                     /db_xref="CDD:333710"
     Site            order(616..621,626,649)
                     /site_type="other"
                     /note="phosphatidylinositol 3-phosphate binding site
                     [chemical binding]"
                     /db_xref="CDD:277249"
     Region          711..771
                     /region_name="FYVE_ZFYV1"
                     /note="FYVE domains found in zinc finger FYVE
                     domain-containing protein 1 (ZFYV1) and similar proteins;
                     cd15734"
                     /db_xref="CDD:277273"
     Site            order(712,715,733..738,740..741,765..767)
                     /site_type="other"
                     /note="putative phosphatidylinositol 3-phosphate binding
                     site [chemical binding]"
                     /db_xref="CDD:277273"
     CDS             1..777
                     /gene="ZFYVE1"
                     /coded_by="XM_061156743.1:745..3078"
                     /db_xref="GeneID:133066054"
ORIGIN      
        1 msaqtspaek glnpgllcqe sytcsgsdea vfecdeccsl qclrceeelh rqerlrnher
       61 irlkaghvpy cdpckgpngh spgvkqravv rcqtckinlc lecqkrthsg gnkrrhpvtv
      121 yhvtkvqell eeegmdeetk rkkmtekvvs fllvdeneei qvtneedfir kldckpdqhl
      181 kvvsifgntg dgkshtlnht ffygrevfkt spaqesctvg vwaaydpvhk vavidtegll
      241 gatvnlsqrt rlllkvlais dlviyrthad rlhndlfkfl gdaseaylkh ftkelkatta
      301 rcgldvplst lgpaviifhe tvhtqllgsd hpsevpekli qdrfrklgrf peafssihyk
      361 gtrtynpptd fsglrraleq qlennttrsp rhpgvifkal kalsdrfsge ipddqmahss
      421 ffpdeyftcs slclscgagc knsmnhgkeg vpheaksrcr yshqydnrvf tckacyergn
      481 evsvvpktaa stdspwmgla kyawsgyvie cpncgvvyrs rqywfgnqdp vdtvvrteiv
      541 hvwpgtdgfl kdnnnaaqrl ldgmnfmaqs vselslgptk avtswltdqi apaywrpnsq
      601 ilscnkcats fkdndtkhhc racgegfcds cssktrpvpe rgwgpapvrv cdncyearns
      661 qldvteaqgd deggtliark vgeavqntlg avvtaidipl glvkdaarpa ywvpdheilh
      721 chscrkefsv klskhhcrac gqgfcdecsh drravpsrgw dhpvrvcfnc nkkpgdl
//
LOCUS       XP_061012727             551 aa            linear   MAM 02-DEC-2023
DEFINITION  DDB1- and CUL4-associated factor 4 isoform X1 [Dama dama].
ACCESSION   XP_061012727
VERSION     XP_061012727.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156744.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..551
                     /product="DDB1- and CUL4-associated factor 4 isoform X1"
                     /calculated_mol_wt=60845
     Region          341..371
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <369..525
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          379..422
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          429..465
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          473..509
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..551
                     /gene="DCAF4"
                     /coded_by="XM_061156744.1:149..1804"
                     /db_xref="GeneID:133066056"
ORIGIN      
        1 mhksswqsrr hrrrghrhna gfrqhgsner ndagaqqspq assdghgevp stsspagsss
       61 vpdlpgyyfd pekkryfrll pghnncnplt kesirqkeme lkrlklleee krqgkkiarl
      121 gfntssllqk sklgflnats ycrlahelrv scmqrkkvqi qssdpsalas dqfnlimadt
      181 nserlftvnd vkvggskygi islhglktpt frvhmhenly ftnrkvlrgg qgasfssevc
      241 sspaqgvrpe gssqvsvfck rapvsklaar pvspsccvfp hqvnamcwas lnhldshvll
      301 clmgiaetpg cvtllptslf vshhaagdrp gmlcsfripg awscawslni qanncfstgl
      361 srrvlvtsvv tghrqsfgts sdvltqqfal tapllfngcr sgeifaidlr cqnqgkgwka
      421 trlfhdsavt svqilqeeqc lmasdmagti klwdlrttkc irqyeghvne yahlplhvhe
      481 eeeivvavgq dcytriwslh dgqllrtips pyptskadip svafssrlgg argapgllma
      541 vrqdlycfsy s
//
LOCUS       XP_061012728             550 aa            linear   MAM 02-DEC-2023
DEFINITION  DDB1- and CUL4-associated factor 4 isoform X2 [Dama dama].
ACCESSION   XP_061012728
VERSION     XP_061012728.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156745.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..550
                     /product="DDB1- and CUL4-associated factor 4 isoform X2"
                     /calculated_mol_wt=60774
     Region          340..370
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <368..524
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          378..421
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          428..464
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          472..508
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..550
                     /gene="DCAF4"
                     /coded_by="XM_061156745.1:149..1801"
                     /db_xref="GeneID:133066056"
ORIGIN      
        1 mhksswqsrr hrrrghrhna gfrqhgsner ndagaqqspq assdghgevp stsspagsss
       61 vpdlpgyyfd pekkryfrll pghnncnplt kesirqkeme lkrlklleee krqgkkiarl
      121 gfntssllqk sklgflnats ycrlahelrv scmqrkkvqi qssdpsalas dqfnlimadt
      181 nserlftvnd vkvggskygi islhglktpt frvhmhenly ftnrkvlrgg qgasfssevc
      241 sspaqgvrpe gssqvsvfck rapvsklaar pvspsccvfp hqvnamcwas lnhldshvll
      301 clmgiaetpg cvtllptslf vshhagdrpg mlcsfripga wscawslniq anncfstgls
      361 rrvlvtsvvt ghrqsfgtss dvltqqfalt apllfngcrs geifaidlrc qnqgkgwkat
      421 rlfhdsavts vqilqeeqcl masdmagtik lwdlrttkci rqyeghvney ahlplhvhee
      481 eeivvavgqd cytriwslhd gqllrtipsp yptskadips vafssrlgga rgapgllmav
      541 rqdlycfsys
//
LOCUS       XP_061012730             494 aa            linear   MAM 02-DEC-2023
DEFINITION  DDB1- and CUL4-associated factor 4 isoform X3 [Dama dama].
ACCESSION   XP_061012730
VERSION     XP_061012730.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156747.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..494
                     /product="DDB1- and CUL4-associated factor 4 isoform X3"
                     /calculated_mol_wt=55001
     Region          284..314
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <312..468
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          322..365
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          372..408
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          416..452
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..494
                     /gene="DCAF4"
                     /coded_by="XM_061156747.1:149..1633"
                     /db_xref="GeneID:133066056"
ORIGIN      
        1 mhksswqsrr hrrrghrhna gfrqhgsner ndagaqqspq assdghgevp stsspagsss
       61 vpdlpgyyfd pekkryfrll pghnncnplt kesirqkeme lkrlklleee krqgkkiarl
      121 gfntssllqk sklgflnats ycrlahelrv scmqrkkvqi qssdpsalas dqfnlimadt
      181 nserlftvnd vkvggskygi islhglktpt frvhmhenly ftnrkvnamc waslnhldsh
      241 vllclmgiae tpgcvtllpt slfvshhaag drpgmlcsfr ipgawscaws lniqanncfs
      301 tglsrrvlvt svvtghrqsf gtssdvltqq faltapllfn gcrsgeifai dlrcqnqgkg
      361 wkatrlfhds avtsvqilqe eqclmasdma gtiklwdlrt tkcirqyegh vneyahlplh
      421 vheeeeivva vgqdcytriw slhdgqllrt ipspyptska dipsvafssr lggargapgl
      481 lmavrqdlyc fsys
//
LOCUS       XP_061012731             494 aa            linear   MAM 02-DEC-2023
DEFINITION  DDB1- and CUL4-associated factor 4 isoform X4 [Dama dama].
ACCESSION   XP_061012731
VERSION     XP_061012731.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156748.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..494
                     /product="DDB1- and CUL4-associated factor 4 isoform X4"
                     /calculated_mol_wt=54734
     Region          284..314
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <312..468
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          322..365
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          372..408
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          416..452
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..494
                     /gene="DCAF4"
                     /coded_by="XM_061156748.1:222..1706"
                     /db_xref="GeneID:133066056"
ORIGIN      
        1 mvltrdlpgy yfdpekkryf rllpghnncn pltkesirqk emelkrlkll eeekrqgkki
       61 arlgfntssl lqksklgfln atsycrlahe lrvscmqrkk vqiqssdpsa lasdqfnlim
      121 adtnserlft vndvkvggsk ygiislhglk tptfrvhmhe nlyftnrkvl rggqgasfss
      181 evcsspaqgv rpegssqvsv fckrapvskl aarpvspscc vfphqvnamc waslnhldsh
      241 vllclmgiae tpgcvtllpt slfvshhaag drpgmlcsfr ipgawscaws lniqanncfs
      301 tglsrrvlvt svvtghrqsf gtssdvltqq faltapllfn gcrsgeifai dlrcqnqgkg
      361 wkatrlfhds avtsvqilqe eqclmasdma gtiklwdlrt tkcirqyegh vneyahlplh
      421 vheeeeivva vgqdcytriw slhdgqllrt ipspyptska dipsvafssr lggargapgl
      481 lmavrqdlyc fsys
//
LOCUS       XP_061012732             493 aa            linear   MAM 02-DEC-2023
DEFINITION  DDB1- and CUL4-associated factor 4 isoform X5 [Dama dama].
ACCESSION   XP_061012732
VERSION     XP_061012732.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156749.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..493
                     /product="DDB1- and CUL4-associated factor 4 isoform X5"
                     /calculated_mol_wt=54930
     Region          283..313
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <311..467
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          321..364
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          371..407
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          415..451
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..493
                     /gene="DCAF4"
                     /coded_by="XM_061156749.1:149..1630"
                     /db_xref="GeneID:133066056"
ORIGIN      
        1 mhksswqsrr hrrrghrhna gfrqhgsner ndagaqqspq assdghgevp stsspagsss
       61 vpdlpgyyfd pekkryfrll pghnncnplt kesirqkeme lkrlklleee krqgkkiarl
      121 gfntssllqk sklgflnats ycrlahelrv scmqrkkvqi qssdpsalas dqfnlimadt
      181 nserlftvnd vkvggskygi islhglktpt frvhmhenly ftnrkvnamc waslnhldsh
      241 vllclmgiae tpgcvtllpt slfvshhagd rpgmlcsfri pgawscawsl niqanncfst
      301 glsrrvlvts vvtghrqsfg tssdvltqqf altapllfng crsgeifaid lrcqnqgkgw
      361 katrlfhdsa vtsvqilqee qclmasdmag tiklwdlrtt kcirqyeghv neyahlplhv
      421 heeeeivvav gqdcytriws lhdgqllrti pspyptskad ipsvafssrl ggargapgll
      481 mavrqdlycf sys
//
LOCUS       XP_061012733             389 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein DPF3 isoform X1 [Dama dama].
ACCESSION   XP_061012733
VERSION     XP_061012733.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156750.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..389
                     /product="zinc finger protein DPF3 isoform X1"
                     /calculated_mol_wt=44045
     Region          24..90
                     /region_name="DPF1-3_N"
                     /note="DPF1-3, N-terminal; pfam14051"
                     /db_xref="CDD:464074"
     Region          <206..233
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     Region          272..328
                     /region_name="PHD1_DPF3"
                     /note="PHD finger 1 found in D4, zinc and double PHD
                     fingers family 3 (DPF3); cd15692"
                     /db_xref="CDD:277162"
     Site            order(272,274..275,277,295,300..302,307..309,313,322,
                     324..326)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277162"
     Site            order(309..310,312..313,316..317,320,322..323,325,327)
                     /site_type="other"
                     /note="PHD2 interface [polypeptide binding]"
                     /db_xref="CDD:277162"
     Region          329..374
                     /region_name="PHD2_d4"
                     /note="PHD finger 2 found in d4 gene family proteins;
                     cd15530"
                     /db_xref="CDD:277005"
     Site            order(329,344..350)
                     /site_type="other"
                     /note="PHD1 interface [polypeptide binding]"
                     /db_xref="CDD:277005"
     Site            order(336,339..346,354,364..369)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277005"
     CDS             1..389
                     /gene="DPF3"
                     /coded_by="XM_061156750.1:99..1268"
                     /db_xref="GeneID:133066057"
ORIGIN      
        1 mssgrifqvs gagshlglls vrlgdqfyke aiehcrsyns rlcaersvrl pfldsqtgva
       61 qnncyiwmek rhrgpglapg qlytyparcw rkkrrlhppe dpklrlleik pevelplkkd
      121 gftsesttle allrgegvek kvdareeeni qeiqrvlend enveegneee dleedipkrk
      181 nrtrgrargs aggrrrhdaa sqedhdkpyv cdicgkrykn rpglsyhyah thlaseegde
      241 aqdqetrspp nhrnenhrpq kgpdgtvipn nycdfclggs nmnkksgrpe elvscadcgr
      301 sghptclqft lnmteavkty kwqciecksc ilcgtsendd qllfcddcdr gyhmyclnpp
      361 vaeppegsws chlcwellke kasafgcqa
//
LOCUS       XP_061012734             378 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein DPF3 isoform X2 [Dama dama].
ACCESSION   XP_061012734
VERSION     XP_061012734.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156751.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..378
                     /product="zinc finger protein DPF3 isoform X2"
                     /calculated_mol_wt=42980
     Region          13..79
                     /region_name="DPF1-3_N"
                     /note="DPF1-3, N-terminal; pfam14051"
                     /db_xref="CDD:464074"
     Region          <195..222
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     Region          261..317
                     /region_name="PHD1_DPF3"
                     /note="PHD finger 1 found in D4, zinc and double PHD
                     fingers family 3 (DPF3); cd15692"
                     /db_xref="CDD:277162"
     Site            order(261,263..264,266,284,289..291,296..298,302,311,
                     313..315)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277162"
     Site            order(298..299,301..302,305..306,309,311..312,314,316)
                     /site_type="other"
                     /note="PHD2 interface [polypeptide binding]"
                     /db_xref="CDD:277162"
     Region          318..363
                     /region_name="PHD2_d4"
                     /note="PHD finger 2 found in d4 gene family proteins;
                     cd15530"
                     /db_xref="CDD:277005"
     Site            order(318,333..339)
                     /site_type="other"
                     /note="PHD1 interface [polypeptide binding]"
                     /db_xref="CDD:277005"
     Site            order(325,328..335,343,353..358)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277005"
     CDS             1..378
                     /gene="DPF3"
                     /coded_by="XM_061156751.1:38..1174"
                     /db_xref="GeneID:133066057"
ORIGIN      
        1 matvihnplk algdqfykea iehcrsynsr lcaersvrlp fldsqtgvaq nncyiwmekr
       61 hrgpglapgq lytyparcwr kkrrlhpped pklrlleikp evelplkkdg ftsesttlea
      121 llrgegvekk vdareeeniq eiqrvlende nveegneeed leedipkrkn rtrgrargsa
      181 ggrrrhdaas qedhdkpyvc dicgkryknr pglsyhyaht hlaseegdea qdqetrsppn
      241 hrnenhrpqk gpdgtvipnn ycdfclggsn mnkksgrpee lvscadcgrs ghptclqftl
      301 nmteavktyk wqciecksci lcgtsenddq llfcddcdrg yhmyclnppv aeppegswsc
      361 hlcwellkek asafgcqa
//
LOCUS       XP_061012735             110 aa            linear   MAM 02-DEC-2023
DEFINITION  tumor suppressor candidate 2-like [Dama dama].
ACCESSION   XP_061012735
VERSION     XP_061012735.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156752.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..110
                     /product="tumor suppressor candidate 2-like"
                     /calculated_mol_wt=12017
     Region          1..109
                     /region_name="TUSC2"
                     /note="Tumour suppressor candidate 2; pfam15000"
                     /db_xref="CDD:464434"
     CDS             1..110
                     /gene="LOC133066059"
                     /coded_by="XM_061156752.1:95..427"
                     /db_xref="GeneID:133066059"
ORIGIN      
        1 mgasgskarg lwpytsaagg ggpeaavaeq alvrprgrvv ppfvftrrgs mfydedgdla
       61 hefyeetivt kngqkraklr rvhknlipqg tvkldpprih vdfpvilyev
//
LOCUS       XP_061012736             490 aa            linear   MAM 02-DEC-2023
DEFINITION  regulator of G-protein signaling 6 isoform X1 [Dama dama].
ACCESSION   XP_061012736
VERSION     XP_061012736.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156753.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..490
                     /product="regulator of G-protein signaling 6 isoform X1"
                     /calculated_mol_wt=56510
     Region          31..119
                     /region_name="DEP_RGS7-like"
                     /note="DEP (Dishevelled, Egl-10, and Pleckstrin) domain
                     found in RGS (regulator of G-protein signaling) proteins
                     of the subfamily R7. This subgroup contains RGS7, RGS6,
                     RGS9 and RGS11. They share a common domain architecture,
                     containing, beside the RGS domain; cd04450"
                     /db_xref="CDD:239897"
     Region          116..217
                     /region_name="RGS_DHEX"
                     /note="Regulator of G-protein signalling DHEX domain;
                     pfam18148"
                     /db_xref="CDD:375589"
     Region          258..319
                     /region_name="GGL"
                     /note="G protein gamma subunit-like motifs; smart00224"
                     /db_xref="CDD:128520"
     Site            order(258,261,265,268,272,277,279,282..283,286..287,290,
                     299..300,309)
                     /site_type="other"
                     /note="beta subunit binding site [polypeptide binding]"
                     /db_xref="CDD:238024"
     Region          328..452
                     /region_name="RGS_RGS6"
                     /note="Regulator of G protein signaling (RGS) domain found
                     in the RGS6 protein; cd08737"
                     /db_xref="CDD:188691"
     Site            order(342,373..377,418..420,423,430,434)
                     /site_type="other"
                     /note="G-beta-5 interaction site"
                     /db_xref="CDD:188691"
     Site            order(357..359,361..362,395..397,399..401,403..405,428,
                     431..432,434..436,440)
                     /site_type="other"
                     /note="G-alpha interaction site"
                     /db_xref="CDD:188691"
     CDS             1..490
                     /gene="RGS6"
                     /coded_by="XM_061156753.1:158..1630"
                     /db_xref="GeneID:133066060"
ORIGIN      
        1 maqgsgdqra vgivdpeess pnmivyrkie diitkmqddk tggvpvrtvk sflskipsvv
       61 tgtdivqwlm knlsiedpve aihlgsliaa qgyvfpisdh vltmkddgtf yrfqapyfwp
      121 sncwepentd yaiylckrtm qnkarlelad yeaenlarlq rafarkwefi fmqaeaqvki
      181 drkkdkterk ildsqerafw dvhrpvpgcv nttemdirkc rrlknpqkvk ksvygvtees
      241 qsqspvhips qpirkttked irkqitflsa qidrhclkms kvaesliayt eqymeydpli
      301 tpaepsnpwi sddialwdie mskepsqqrv krwgfsfdei lkdqvgrdqf lrflesefss
      361 enlrfwlavq dlkkqplqdv arrveeiwqe flapgapsai nldshsyeit sqnvkdggry
      421 tfedaqehiy klmksdsyar flrsnayqdl llakkkpese qgrrtslekf trsvgkslag
      481 krltglmqss
//
LOCUS       XP_061012737             465 aa            linear   MAM 02-DEC-2023
DEFINITION  regulator of G-protein signaling 6 isoform X2 [Dama dama].
ACCESSION   XP_061012737
VERSION     XP_061012737.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156754.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..465
                     /product="regulator of G-protein signaling 6 isoform X2"
                     /calculated_mol_wt=53785
     Region          31..119
                     /region_name="DEP_RGS7-like"
                     /note="DEP (Dishevelled, Egl-10, and Pleckstrin) domain
                     found in RGS (regulator of G-protein signaling) proteins
                     of the subfamily R7. This subgroup contains RGS7, RGS6,
                     RGS9 and RGS11. They share a common domain architecture,
                     containing, beside the RGS domain; cd04450"
                     /db_xref="CDD:239897"
     Region          116..217
                     /region_name="RGS_DHEX"
                     /note="Regulator of G-protein signalling DHEX domain;
                     pfam18148"
                     /db_xref="CDD:375589"
     Region          258..319
                     /region_name="GGL"
                     /note="G protein gamma subunit-like motifs; smart00224"
                     /db_xref="CDD:128520"
     Site            order(258,261,265,268,272,277,279,282..283,286..287,290,
                     299..300,309)
                     /site_type="other"
                     /note="beta subunit binding site [polypeptide binding]"
                     /db_xref="CDD:238024"
     Region          328..452
                     /region_name="RGS_RGS6"
                     /note="Regulator of G protein signaling (RGS) domain found
                     in the RGS6 protein; cd08737"
                     /db_xref="CDD:188691"
     Site            order(342,373..377,418..420,423,430,434)
                     /site_type="other"
                     /note="G-beta-5 interaction site"
                     /db_xref="CDD:188691"
     Site            order(357..359,361..362,395..397,399..401,403..405,428,
                     431..432,434..436,440)
                     /site_type="other"
                     /note="G-alpha interaction site"
                     /db_xref="CDD:188691"
     CDS             1..465
                     /gene="RGS6"
                     /coded_by="XM_061156754.1:158..1555"
                     /db_xref="GeneID:133066060"
ORIGIN      
        1 maqgsgdqra vgivdpeess pnmivyrkie diitkmqddk tggvpvrtvk sflskipsvv
       61 tgtdivqwlm knlsiedpve aihlgsliaa qgyvfpisdh vltmkddgtf yrfqapyfwp
      121 sncwepentd yaiylckrtm qnkarlelad yeaenlarlq rafarkwefi fmqaeaqvki
      181 drkkdkterk ildsqerafw dvhrpvpgcv nttemdirkc rrlknpqkvk ksvygvtees
      241 qsqspvhips qpirkttked irkqitflsa qidrhclkms kvaesliayt eqymeydpli
      301 tpaepsnpwi sddialwdie mskepsqqrv krwgfsfdei lkdqvgrdqf lrflesefss
      361 enlrfwlavq dlkkqplqdv arrveeiwqe flapgapsai nldshsyeit sqnvkdggry
      421 tfedaqehiy klmksdsyar flrsnayqdl llakkkkvsk vvelp
//
LOCUS       XP_061012738             551 aa            linear   MAM 02-DEC-2023
DEFINITION  regulator of G-protein signaling 6 isoform X3 [Dama dama].
ACCESSION   XP_061012738
VERSION     XP_061012738.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156755.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..551
                     /product="regulator of G-protein signaling 6 isoform X3"
                     /calculated_mol_wt=63033
     Region          31..119
                     /region_name="DEP_RGS7-like"
                     /note="DEP (Dishevelled, Egl-10, and Pleckstrin) domain
                     found in RGS (regulator of G-protein signaling) proteins
                     of the subfamily R7. This subgroup contains RGS7, RGS6,
                     RGS9 and RGS11. They share a common domain architecture,
                     containing, beside the RGS domain; cd04450"
                     /db_xref="CDD:239897"
     Region          116..217
                     /region_name="RGS_DHEX"
                     /note="Regulator of G-protein signalling DHEX domain;
                     pfam18148"
                     /db_xref="CDD:375589"
     Region          258..319
                     /region_name="GGL"
                     /note="G protein gamma subunit-like motifs; smart00224"
                     /db_xref="CDD:128520"
     Site            order(258,261,265,268,272,277,279,282..283,286..287,290,
                     299..300,309)
                     /site_type="other"
                     /note="beta subunit binding site [polypeptide binding]"
                     /db_xref="CDD:238024"
     Region          328..452
                     /region_name="RGS_RGS6"
                     /note="Regulator of G protein signaling (RGS) domain found
                     in the RGS6 protein; cd08737"
                     /db_xref="CDD:188691"
     Site            order(342,373..377,418..420,423,430,434)
                     /site_type="other"
                     /note="G-beta-5 interaction site"
                     /db_xref="CDD:188691"
     Site            order(357..359,361..362,395..397,399..401,403..405,428,
                     431..432,434..436,440)
                     /site_type="other"
                     /note="G-alpha interaction site"
                     /db_xref="CDD:188691"
     CDS             1..551
                     /gene="RGS6"
                     /coded_by="XM_061156755.1:158..1813"
                     /db_xref="GeneID:133066060"
ORIGIN      
        1 maqgsgdqra vgivdpeess pnmivyrkie diitkmqddk tggvpvrtvk sflskipsvv
       61 tgtdivqwlm knlsiedpve aihlgsliaa qgyvfpisdh vltmkddgtf yrfqapyfwp
      121 sncwepentd yaiylckrtm qnkarlelad yeaenlarlq rafarkwefi fmqaeaqvki
      181 drkkdkterk ildsqerafw dvhrpvpgcv nttemdirkc rrlknpqkvk ksvygvtees
      241 qsqspvhips qpirkttked irkqitflsa qidrhclkms kvaesliayt eqymeydpli
      301 tpaepsnpwi sddialwdie mskepsqqrv krwgfsfdei lkdqvgrdqf lrflesefss
      361 enlrfwlavq dlkkqplqdv arrveeiwqe flapgapsai nldshsyeit sqnvkdggry
      421 tfedaqehiy klmksdsyar flrsnayqdl llakkkpese qgrrtslekf trsvccwrrv
      481 rmaaafhprg gflpavgkvt ggqaphrpda vlltvpaagp gpedhagsrr rstsadrasl
      541 rgdlvtvkek e
//
LOCUS       XP_061012739            1784 aa            linear   MAM 02-DEC-2023
DEFINITION  signal-induced proliferation-associated 1-like protein 1 isoform X1
            [Dama dama].
ACCESSION   XP_061012739
VERSION     XP_061012739.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156756.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1784
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1784
                     /product="signal-induced proliferation-associated 1-like
                     protein 1 isoform X1"
                     /calculated_mol_wt=197124
     Region          629..809
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     Region          953..1025
                     /region_name="PDZ_SIPA1-like"
                     /note="PDZ domain of signal-induced
                     proliferation-associated protein 1 (SIPA1), and related
                     domains; cd06745"
                     /db_xref="CDD:467227"
     Site            order(963..969,975,978,1007,1011,1014..1015)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467227"
     Region          1484..1729
                     /region_name="SPAR_C"
                     /note="C-terminal domain of SPAR protein; pfam11881"
                     /db_xref="CDD:463383"
     Region          1717..1772
                     /region_name="ZapB"
                     /note="Cell division protein ZapB; pfam06005"
                     /db_xref="CDD:428718"
     CDS             1..1784
                     /gene="SIPA1L1"
                     /coded_by="XM_061156756.1:582..5936"
                     /db_xref="GeneID:133066062"
ORIGIN      
        1 mtslkrsqte rpvaterasv vgadgtpkvh tddfymrrfr sqngslgssv mapvgpprse
       61 gshhitstpg vpkmgvrari adwpprkenv kessrssqei etssclesls sksspvsqgs
      121 svslnssdsa mlksiqntlk nktrpsesmd srflmpeayp ssprkalrri rqrsnsditi
      181 seldvdsfde cisptyktgp slhreygsts sidkqgtsge sffdllkgyk edksdrgptp
      241 tklsdflias ggkgsgfsld vidgpisqre nlrlfkerek plkrrskset gdssifrklr
      301 nakgeelgks sdlednrsed svrpwtcpkc fahydvqsil fdlneaimnr hnvikrrntt
      361 tgasaaavas lvsgplshsa sfsspmgste dlnskgslsm dqgddksnel vmscpyfrne
      421 iggegerkis lsksnsgsfs gcesasfest lsshctnagv avlevpkenl vlhldrvkry
      481 ivehvdlgay yyrkffyqke hwnyfgaden lgpvavsirr ekpeetkeng spynyriifr
      541 tselmtlrgs vledaipsta khstarglpl kevlehvipe lnvqclrlaf ntpkvteqlm
      601 kldeqglnyq qkvgimycka gqsteeemyn nesagpafee flqllgervr lkgfekyraq
      661 ldtktdstgt hslyttykdy eimfhvstml pytpnnkqql lrkrhigndi vtivfqepga
      721 qpfspknirs hfqhvfvivr ahnpctdsvc ysvavtrsrd vpsfgppipk gvtfpksnvf
      781 rdfllakvin aenaahksek framatrtrq eylkdlaekn vtntpidpsg kfpfislask
      841 kkekskpypg aelsslgaiv wavrakdynk ameidcllgv snefvvlieq etksvvfncs
      901 crdvigwtst daslkvfyer gecvsvesfv snddikeivr rlqfvskgce svemtlrrng
      961 lgqlgfhvny egivadvepy gyawqaglrq gsrlveickv avatlsheqm idllrtsvtv
     1021 kvviipphdd ctprrscset yrmpvmeykm negvsyefkf pfrnnnkwqr nankgphspq
     1081 vpsqvqspmt srlntgkadg kmppperaan iprsissdgr plerrlspgs diyvtvssma
     1141 larsqpcrns psslsssset gsgggtyrqk smpegfgisr rspasidrqn tqsdiggsgk
     1201 stpswqrsed siadqmeptc hlpavskilp afrespsgrl mrqdpvvhls pnkqghsdsh
     1261 ysshsssntl ssnassahsd ekwydgdrae aelssysylq gtsadsgidt tsygpshgst
     1321 aslgaatssp rsgpakekva plwhsssevi smadrtleae shgmdrkaes slsldihtks
     1381 pagsspltre nptfsisdaa shtstmssrh saspvvftsa rsspkeelhp aapsqltpsf
     1441 ssssssssgp rtfyprqgat skyligwkkp egtinsvgfm dtrkrhqsdg neiahprlra
     1501 strdlraspk ptskstieed lkklidlesp tpesqknfkf halsspqspf pttptsrral
     1561 hrtlsdesiy sgqrehffts raslldqalp ndvlfsstyp slptslplrr psytlgmksl
     1621 hgefsasdss ltdvqetrrp pmpdpglmpl pdaaadldws nlvdaakaye vqrasffaas
     1681 denhrplsaa snsdqledqa lvqmksysss kdssptlask vdqlegmlkm lredlkkeke
     1741 dkahlqaevq hlrednlrlq eesqnasdkl kkftewvfnt idms
//
LOCUS       XP_061012740            1784 aa            linear   MAM 02-DEC-2023
DEFINITION  signal-induced proliferation-associated 1-like protein 1 isoform X1
            [Dama dama].
ACCESSION   XP_061012740
VERSION     XP_061012740.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156757.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1784
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1784
                     /product="signal-induced proliferation-associated 1-like
                     protein 1 isoform X1"
                     /calculated_mol_wt=197124
     Region          629..809
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     Region          953..1025
                     /region_name="PDZ_SIPA1-like"
                     /note="PDZ domain of signal-induced
                     proliferation-associated protein 1 (SIPA1), and related
                     domains; cd06745"
                     /db_xref="CDD:467227"
     Site            order(963..969,975,978,1007,1011,1014..1015)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467227"
     Region          1484..1729
                     /region_name="SPAR_C"
                     /note="C-terminal domain of SPAR protein; pfam11881"
                     /db_xref="CDD:463383"
     Region          1717..1772
                     /region_name="ZapB"
                     /note="Cell division protein ZapB; pfam06005"
                     /db_xref="CDD:428718"
     CDS             1..1784
                     /gene="SIPA1L1"
                     /coded_by="XM_061156757.1:671..6025"
                     /db_xref="GeneID:133066062"
ORIGIN      
        1 mtslkrsqte rpvaterasv vgadgtpkvh tddfymrrfr sqngslgssv mapvgpprse
       61 gshhitstpg vpkmgvrari adwpprkenv kessrssqei etssclesls sksspvsqgs
      121 svslnssdsa mlksiqntlk nktrpsesmd srflmpeayp ssprkalrri rqrsnsditi
      181 seldvdsfde cisptyktgp slhreygsts sidkqgtsge sffdllkgyk edksdrgptp
      241 tklsdflias ggkgsgfsld vidgpisqre nlrlfkerek plkrrskset gdssifrklr
      301 nakgeelgks sdlednrsed svrpwtcpkc fahydvqsil fdlneaimnr hnvikrrntt
      361 tgasaaavas lvsgplshsa sfsspmgste dlnskgslsm dqgddksnel vmscpyfrne
      421 iggegerkis lsksnsgsfs gcesasfest lsshctnagv avlevpkenl vlhldrvkry
      481 ivehvdlgay yyrkffyqke hwnyfgaden lgpvavsirr ekpeetkeng spynyriifr
      541 tselmtlrgs vledaipsta khstarglpl kevlehvipe lnvqclrlaf ntpkvteqlm
      601 kldeqglnyq qkvgimycka gqsteeemyn nesagpafee flqllgervr lkgfekyraq
      661 ldtktdstgt hslyttykdy eimfhvstml pytpnnkqql lrkrhigndi vtivfqepga
      721 qpfspknirs hfqhvfvivr ahnpctdsvc ysvavtrsrd vpsfgppipk gvtfpksnvf
      781 rdfllakvin aenaahksek framatrtrq eylkdlaekn vtntpidpsg kfpfislask
      841 kkekskpypg aelsslgaiv wavrakdynk ameidcllgv snefvvlieq etksvvfncs
      901 crdvigwtst daslkvfyer gecvsvesfv snddikeivr rlqfvskgce svemtlrrng
      961 lgqlgfhvny egivadvepy gyawqaglrq gsrlveickv avatlsheqm idllrtsvtv
     1021 kvviipphdd ctprrscset yrmpvmeykm negvsyefkf pfrnnnkwqr nankgphspq
     1081 vpsqvqspmt srlntgkadg kmppperaan iprsissdgr plerrlspgs diyvtvssma
     1141 larsqpcrns psslsssset gsgggtyrqk smpegfgisr rspasidrqn tqsdiggsgk
     1201 stpswqrsed siadqmeptc hlpavskilp afrespsgrl mrqdpvvhls pnkqghsdsh
     1261 ysshsssntl ssnassahsd ekwydgdrae aelssysylq gtsadsgidt tsygpshgst
     1321 aslgaatssp rsgpakekva plwhsssevi smadrtleae shgmdrkaes slsldihtks
     1381 pagsspltre nptfsisdaa shtstmssrh saspvvftsa rsspkeelhp aapsqltpsf
     1441 ssssssssgp rtfyprqgat skyligwkkp egtinsvgfm dtrkrhqsdg neiahprlra
     1501 strdlraspk ptskstieed lkklidlesp tpesqknfkf halsspqspf pttptsrral
     1561 hrtlsdesiy sgqrehffts raslldqalp ndvlfsstyp slptslplrr psytlgmksl
     1621 hgefsasdss ltdvqetrrp pmpdpglmpl pdaaadldws nlvdaakaye vqrasffaas
     1681 denhrplsaa snsdqledqa lvqmksysss kdssptlask vdqlegmlkm lredlkkeke
     1741 dkahlqaevq hlrednlrlq eesqnasdkl kkftewvfnt idms
//
LOCUS       XP_061012741            1784 aa            linear   MAM 02-DEC-2023
DEFINITION  signal-induced proliferation-associated 1-like protein 1 isoform X1
            [Dama dama].
ACCESSION   XP_061012741
VERSION     XP_061012741.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156758.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1784
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1784
                     /product="signal-induced proliferation-associated 1-like
                     protein 1 isoform X1"
                     /calculated_mol_wt=197124
     Region          629..809
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     Region          953..1025
                     /region_name="PDZ_SIPA1-like"
                     /note="PDZ domain of signal-induced
                     proliferation-associated protein 1 (SIPA1), and related
                     domains; cd06745"
                     /db_xref="CDD:467227"
     Site            order(963..969,975,978,1007,1011,1014..1015)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467227"
     Region          1484..1729
                     /region_name="SPAR_C"
                     /note="C-terminal domain of SPAR protein; pfam11881"
                     /db_xref="CDD:463383"
     Region          1717..1772
                     /region_name="ZapB"
                     /note="Cell division protein ZapB; pfam06005"
                     /db_xref="CDD:428718"
     CDS             1..1784
                     /gene="SIPA1L1"
                     /coded_by="XM_061156758.1:533..5887"
                     /db_xref="GeneID:133066062"
ORIGIN      
        1 mtslkrsqte rpvaterasv vgadgtpkvh tddfymrrfr sqngslgssv mapvgpprse
       61 gshhitstpg vpkmgvrari adwpprkenv kessrssqei etssclesls sksspvsqgs
      121 svslnssdsa mlksiqntlk nktrpsesmd srflmpeayp ssprkalrri rqrsnsditi
      181 seldvdsfde cisptyktgp slhreygsts sidkqgtsge sffdllkgyk edksdrgptp
      241 tklsdflias ggkgsgfsld vidgpisqre nlrlfkerek plkrrskset gdssifrklr
      301 nakgeelgks sdlednrsed svrpwtcpkc fahydvqsil fdlneaimnr hnvikrrntt
      361 tgasaaavas lvsgplshsa sfsspmgste dlnskgslsm dqgddksnel vmscpyfrne
      421 iggegerkis lsksnsgsfs gcesasfest lsshctnagv avlevpkenl vlhldrvkry
      481 ivehvdlgay yyrkffyqke hwnyfgaden lgpvavsirr ekpeetkeng spynyriifr
      541 tselmtlrgs vledaipsta khstarglpl kevlehvipe lnvqclrlaf ntpkvteqlm
      601 kldeqglnyq qkvgimycka gqsteeemyn nesagpafee flqllgervr lkgfekyraq
      661 ldtktdstgt hslyttykdy eimfhvstml pytpnnkqql lrkrhigndi vtivfqepga
      721 qpfspknirs hfqhvfvivr ahnpctdsvc ysvavtrsrd vpsfgppipk gvtfpksnvf
      781 rdfllakvin aenaahksek framatrtrq eylkdlaekn vtntpidpsg kfpfislask
      841 kkekskpypg aelsslgaiv wavrakdynk ameidcllgv snefvvlieq etksvvfncs
      901 crdvigwtst daslkvfyer gecvsvesfv snddikeivr rlqfvskgce svemtlrrng
      961 lgqlgfhvny egivadvepy gyawqaglrq gsrlveickv avatlsheqm idllrtsvtv
     1021 kvviipphdd ctprrscset yrmpvmeykm negvsyefkf pfrnnnkwqr nankgphspq
     1081 vpsqvqspmt srlntgkadg kmppperaan iprsissdgr plerrlspgs diyvtvssma
     1141 larsqpcrns psslsssset gsgggtyrqk smpegfgisr rspasidrqn tqsdiggsgk
     1201 stpswqrsed siadqmeptc hlpavskilp afrespsgrl mrqdpvvhls pnkqghsdsh
     1261 ysshsssntl ssnassahsd ekwydgdrae aelssysylq gtsadsgidt tsygpshgst
     1321 aslgaatssp rsgpakekva plwhsssevi smadrtleae shgmdrkaes slsldihtks
     1381 pagsspltre nptfsisdaa shtstmssrh saspvvftsa rsspkeelhp aapsqltpsf
     1441 ssssssssgp rtfyprqgat skyligwkkp egtinsvgfm dtrkrhqsdg neiahprlra
     1501 strdlraspk ptskstieed lkklidlesp tpesqknfkf halsspqspf pttptsrral
     1561 hrtlsdesiy sgqrehffts raslldqalp ndvlfsstyp slptslplrr psytlgmksl
     1621 hgefsasdss ltdvqetrrp pmpdpglmpl pdaaadldws nlvdaakaye vqrasffaas
     1681 denhrplsaa snsdqledqa lvqmksysss kdssptlask vdqlegmlkm lredlkkeke
     1741 dkahlqaevq hlrednlrlq eesqnasdkl kkftewvfnt idms
//
LOCUS       XP_061012742            1784 aa            linear   MAM 02-DEC-2023
DEFINITION  signal-induced proliferation-associated 1-like protein 1 isoform X1
            [Dama dama].
ACCESSION   XP_061012742
VERSION     XP_061012742.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156759.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1784
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1784
                     /product="signal-induced proliferation-associated 1-like
                     protein 1 isoform X1"
                     /calculated_mol_wt=197124
     Region          629..809
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     Region          953..1025
                     /region_name="PDZ_SIPA1-like"
                     /note="PDZ domain of signal-induced
                     proliferation-associated protein 1 (SIPA1), and related
                     domains; cd06745"
                     /db_xref="CDD:467227"
     Site            order(963..969,975,978,1007,1011,1014..1015)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467227"
     Region          1484..1729
                     /region_name="SPAR_C"
                     /note="C-terminal domain of SPAR protein; pfam11881"
                     /db_xref="CDD:463383"
     Region          1717..1772
                     /region_name="ZapB"
                     /note="Cell division protein ZapB; pfam06005"
                     /db_xref="CDD:428718"
     CDS             1..1784
                     /gene="SIPA1L1"
                     /coded_by="XM_061156759.1:734..6088"
                     /db_xref="GeneID:133066062"
ORIGIN      
        1 mtslkrsqte rpvaterasv vgadgtpkvh tddfymrrfr sqngslgssv mapvgpprse
       61 gshhitstpg vpkmgvrari adwpprkenv kessrssqei etssclesls sksspvsqgs
      121 svslnssdsa mlksiqntlk nktrpsesmd srflmpeayp ssprkalrri rqrsnsditi
      181 seldvdsfde cisptyktgp slhreygsts sidkqgtsge sffdllkgyk edksdrgptp
      241 tklsdflias ggkgsgfsld vidgpisqre nlrlfkerek plkrrskset gdssifrklr
      301 nakgeelgks sdlednrsed svrpwtcpkc fahydvqsil fdlneaimnr hnvikrrntt
      361 tgasaaavas lvsgplshsa sfsspmgste dlnskgslsm dqgddksnel vmscpyfrne
      421 iggegerkis lsksnsgsfs gcesasfest lsshctnagv avlevpkenl vlhldrvkry
      481 ivehvdlgay yyrkffyqke hwnyfgaden lgpvavsirr ekpeetkeng spynyriifr
      541 tselmtlrgs vledaipsta khstarglpl kevlehvipe lnvqclrlaf ntpkvteqlm
      601 kldeqglnyq qkvgimycka gqsteeemyn nesagpafee flqllgervr lkgfekyraq
      661 ldtktdstgt hslyttykdy eimfhvstml pytpnnkqql lrkrhigndi vtivfqepga
      721 qpfspknirs hfqhvfvivr ahnpctdsvc ysvavtrsrd vpsfgppipk gvtfpksnvf
      781 rdfllakvin aenaahksek framatrtrq eylkdlaekn vtntpidpsg kfpfislask
      841 kkekskpypg aelsslgaiv wavrakdynk ameidcllgv snefvvlieq etksvvfncs
      901 crdvigwtst daslkvfyer gecvsvesfv snddikeivr rlqfvskgce svemtlrrng
      961 lgqlgfhvny egivadvepy gyawqaglrq gsrlveickv avatlsheqm idllrtsvtv
     1021 kvviipphdd ctprrscset yrmpvmeykm negvsyefkf pfrnnnkwqr nankgphspq
     1081 vpsqvqspmt srlntgkadg kmppperaan iprsissdgr plerrlspgs diyvtvssma
     1141 larsqpcrns psslsssset gsgggtyrqk smpegfgisr rspasidrqn tqsdiggsgk
     1201 stpswqrsed siadqmeptc hlpavskilp afrespsgrl mrqdpvvhls pnkqghsdsh
     1261 ysshsssntl ssnassahsd ekwydgdrae aelssysylq gtsadsgidt tsygpshgst
     1321 aslgaatssp rsgpakekva plwhsssevi smadrtleae shgmdrkaes slsldihtks
     1381 pagsspltre nptfsisdaa shtstmssrh saspvvftsa rsspkeelhp aapsqltpsf
     1441 ssssssssgp rtfyprqgat skyligwkkp egtinsvgfm dtrkrhqsdg neiahprlra
     1501 strdlraspk ptskstieed lkklidlesp tpesqknfkf halsspqspf pttptsrral
     1561 hrtlsdesiy sgqrehffts raslldqalp ndvlfsstyp slptslplrr psytlgmksl
     1621 hgefsasdss ltdvqetrrp pmpdpglmpl pdaaadldws nlvdaakaye vqrasffaas
     1681 denhrplsaa snsdqledqa lvqmksysss kdssptlask vdqlegmlkm lredlkkeke
     1741 dkahlqaevq hlrednlrlq eesqnasdkl kkftewvfnt idms
//
LOCUS       XP_061012743            1784 aa            linear   MAM 02-DEC-2023
DEFINITION  signal-induced proliferation-associated 1-like protein 1 isoform X1
            [Dama dama].
ACCESSION   XP_061012743
VERSION     XP_061012743.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156760.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1784
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1784
                     /product="signal-induced proliferation-associated 1-like
                     protein 1 isoform X1"
                     /calculated_mol_wt=197124
     Region          629..809
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     Region          953..1025
                     /region_name="PDZ_SIPA1-like"
                     /note="PDZ domain of signal-induced
                     proliferation-associated protein 1 (SIPA1), and related
                     domains; cd06745"
                     /db_xref="CDD:467227"
     Site            order(963..969,975,978,1007,1011,1014..1015)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467227"
     Region          1484..1729
                     /region_name="SPAR_C"
                     /note="C-terminal domain of SPAR protein; pfam11881"
                     /db_xref="CDD:463383"
     Region          1717..1772
                     /region_name="ZapB"
                     /note="Cell division protein ZapB; pfam06005"
                     /db_xref="CDD:428718"
     CDS             1..1784
                     /gene="SIPA1L1"
                     /coded_by="XM_061156760.1:419..5773"
                     /db_xref="GeneID:133066062"
ORIGIN      
        1 mtslkrsqte rpvaterasv vgadgtpkvh tddfymrrfr sqngslgssv mapvgpprse
       61 gshhitstpg vpkmgvrari adwpprkenv kessrssqei etssclesls sksspvsqgs
      121 svslnssdsa mlksiqntlk nktrpsesmd srflmpeayp ssprkalrri rqrsnsditi
      181 seldvdsfde cisptyktgp slhreygsts sidkqgtsge sffdllkgyk edksdrgptp
      241 tklsdflias ggkgsgfsld vidgpisqre nlrlfkerek plkrrskset gdssifrklr
      301 nakgeelgks sdlednrsed svrpwtcpkc fahydvqsil fdlneaimnr hnvikrrntt
      361 tgasaaavas lvsgplshsa sfsspmgste dlnskgslsm dqgddksnel vmscpyfrne
      421 iggegerkis lsksnsgsfs gcesasfest lsshctnagv avlevpkenl vlhldrvkry
      481 ivehvdlgay yyrkffyqke hwnyfgaden lgpvavsirr ekpeetkeng spynyriifr
      541 tselmtlrgs vledaipsta khstarglpl kevlehvipe lnvqclrlaf ntpkvteqlm
      601 kldeqglnyq qkvgimycka gqsteeemyn nesagpafee flqllgervr lkgfekyraq
      661 ldtktdstgt hslyttykdy eimfhvstml pytpnnkqql lrkrhigndi vtivfqepga
      721 qpfspknirs hfqhvfvivr ahnpctdsvc ysvavtrsrd vpsfgppipk gvtfpksnvf
      781 rdfllakvin aenaahksek framatrtrq eylkdlaekn vtntpidpsg kfpfislask
      841 kkekskpypg aelsslgaiv wavrakdynk ameidcllgv snefvvlieq etksvvfncs
      901 crdvigwtst daslkvfyer gecvsvesfv snddikeivr rlqfvskgce svemtlrrng
      961 lgqlgfhvny egivadvepy gyawqaglrq gsrlveickv avatlsheqm idllrtsvtv
     1021 kvviipphdd ctprrscset yrmpvmeykm negvsyefkf pfrnnnkwqr nankgphspq
     1081 vpsqvqspmt srlntgkadg kmppperaan iprsissdgr plerrlspgs diyvtvssma
     1141 larsqpcrns psslsssset gsgggtyrqk smpegfgisr rspasidrqn tqsdiggsgk
     1201 stpswqrsed siadqmeptc hlpavskilp afrespsgrl mrqdpvvhls pnkqghsdsh
     1261 ysshsssntl ssnassahsd ekwydgdrae aelssysylq gtsadsgidt tsygpshgst
     1321 aslgaatssp rsgpakekva plwhsssevi smadrtleae shgmdrkaes slsldihtks
     1381 pagsspltre nptfsisdaa shtstmssrh saspvvftsa rsspkeelhp aapsqltpsf
     1441 ssssssssgp rtfyprqgat skyligwkkp egtinsvgfm dtrkrhqsdg neiahprlra
     1501 strdlraspk ptskstieed lkklidlesp tpesqknfkf halsspqspf pttptsrral
     1561 hrtlsdesiy sgqrehffts raslldqalp ndvlfsstyp slptslplrr psytlgmksl
     1621 hgefsasdss ltdvqetrrp pmpdpglmpl pdaaadldws nlvdaakaye vqrasffaas
     1681 denhrplsaa snsdqledqa lvqmksysss kdssptlask vdqlegmlkm lredlkkeke
     1741 dkahlqaevq hlrednlrlq eesqnasdkl kkftewvfnt idms
//
LOCUS       XP_061012744            1784 aa            linear   MAM 02-DEC-2023
DEFINITION  signal-induced proliferation-associated 1-like protein 1 isoform X1
            [Dama dama].
ACCESSION   XP_061012744
VERSION     XP_061012744.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156761.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1784
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1784
                     /product="signal-induced proliferation-associated 1-like
                     protein 1 isoform X1"
                     /calculated_mol_wt=197124
     Region          629..809
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     Region          953..1025
                     /region_name="PDZ_SIPA1-like"
                     /note="PDZ domain of signal-induced
                     proliferation-associated protein 1 (SIPA1), and related
                     domains; cd06745"
                     /db_xref="CDD:467227"
     Site            order(963..969,975,978,1007,1011,1014..1015)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467227"
     Region          1484..1729
                     /region_name="SPAR_C"
                     /note="C-terminal domain of SPAR protein; pfam11881"
                     /db_xref="CDD:463383"
     Region          1717..1772
                     /region_name="ZapB"
                     /note="Cell division protein ZapB; pfam06005"
                     /db_xref="CDD:428718"
     CDS             1..1784
                     /gene="SIPA1L1"
                     /coded_by="XM_061156761.1:667..6021"
                     /db_xref="GeneID:133066062"
ORIGIN      
        1 mtslkrsqte rpvaterasv vgadgtpkvh tddfymrrfr sqngslgssv mapvgpprse
       61 gshhitstpg vpkmgvrari adwpprkenv kessrssqei etssclesls sksspvsqgs
      121 svslnssdsa mlksiqntlk nktrpsesmd srflmpeayp ssprkalrri rqrsnsditi
      181 seldvdsfde cisptyktgp slhreygsts sidkqgtsge sffdllkgyk edksdrgptp
      241 tklsdflias ggkgsgfsld vidgpisqre nlrlfkerek plkrrskset gdssifrklr
      301 nakgeelgks sdlednrsed svrpwtcpkc fahydvqsil fdlneaimnr hnvikrrntt
      361 tgasaaavas lvsgplshsa sfsspmgste dlnskgslsm dqgddksnel vmscpyfrne
      421 iggegerkis lsksnsgsfs gcesasfest lsshctnagv avlevpkenl vlhldrvkry
      481 ivehvdlgay yyrkffyqke hwnyfgaden lgpvavsirr ekpeetkeng spynyriifr
      541 tselmtlrgs vledaipsta khstarglpl kevlehvipe lnvqclrlaf ntpkvteqlm
      601 kldeqglnyq qkvgimycka gqsteeemyn nesagpafee flqllgervr lkgfekyraq
      661 ldtktdstgt hslyttykdy eimfhvstml pytpnnkqql lrkrhigndi vtivfqepga
      721 qpfspknirs hfqhvfvivr ahnpctdsvc ysvavtrsrd vpsfgppipk gvtfpksnvf
      781 rdfllakvin aenaahksek framatrtrq eylkdlaekn vtntpidpsg kfpfislask
      841 kkekskpypg aelsslgaiv wavrakdynk ameidcllgv snefvvlieq etksvvfncs
      901 crdvigwtst daslkvfyer gecvsvesfv snddikeivr rlqfvskgce svemtlrrng
      961 lgqlgfhvny egivadvepy gyawqaglrq gsrlveickv avatlsheqm idllrtsvtv
     1021 kvviipphdd ctprrscset yrmpvmeykm negvsyefkf pfrnnnkwqr nankgphspq
     1081 vpsqvqspmt srlntgkadg kmppperaan iprsissdgr plerrlspgs diyvtvssma
     1141 larsqpcrns psslsssset gsgggtyrqk smpegfgisr rspasidrqn tqsdiggsgk
     1201 stpswqrsed siadqmeptc hlpavskilp afrespsgrl mrqdpvvhls pnkqghsdsh
     1261 ysshsssntl ssnassahsd ekwydgdrae aelssysylq gtsadsgidt tsygpshgst
     1321 aslgaatssp rsgpakekva plwhsssevi smadrtleae shgmdrkaes slsldihtks
     1381 pagsspltre nptfsisdaa shtstmssrh saspvvftsa rsspkeelhp aapsqltpsf
     1441 ssssssssgp rtfyprqgat skyligwkkp egtinsvgfm dtrkrhqsdg neiahprlra
     1501 strdlraspk ptskstieed lkklidlesp tpesqknfkf halsspqspf pttptsrral
     1561 hrtlsdesiy sgqrehffts raslldqalp ndvlfsstyp slptslplrr psytlgmksl
     1621 hgefsasdss ltdvqetrrp pmpdpglmpl pdaaadldws nlvdaakaye vqrasffaas
     1681 denhrplsaa snsdqledqa lvqmksysss kdssptlask vdqlegmlkm lredlkkeke
     1741 dkahlqaevq hlrednlrlq eesqnasdkl kkftewvfnt idms
//
LOCUS       XP_061012745            1784 aa            linear   MAM 02-DEC-2023
DEFINITION  signal-induced proliferation-associated 1-like protein 1 isoform X1
            [Dama dama].
ACCESSION   XP_061012745
VERSION     XP_061012745.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156762.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1784
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1784
                     /product="signal-induced proliferation-associated 1-like
                     protein 1 isoform X1"
                     /calculated_mol_wt=197124
     Region          629..809
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     Region          953..1025
                     /region_name="PDZ_SIPA1-like"
                     /note="PDZ domain of signal-induced
                     proliferation-associated protein 1 (SIPA1), and related
                     domains; cd06745"
                     /db_xref="CDD:467227"
     Site            order(963..969,975,978,1007,1011,1014..1015)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467227"
     Region          1484..1729
                     /region_name="SPAR_C"
                     /note="C-terminal domain of SPAR protein; pfam11881"
                     /db_xref="CDD:463383"
     Region          1717..1772
                     /region_name="ZapB"
                     /note="Cell division protein ZapB; pfam06005"
                     /db_xref="CDD:428718"
     CDS             1..1784
                     /gene="SIPA1L1"
                     /coded_by="XM_061156762.1:800..6154"
                     /db_xref="GeneID:133066062"
ORIGIN      
        1 mtslkrsqte rpvaterasv vgadgtpkvh tddfymrrfr sqngslgssv mapvgpprse
       61 gshhitstpg vpkmgvrari adwpprkenv kessrssqei etssclesls sksspvsqgs
      121 svslnssdsa mlksiqntlk nktrpsesmd srflmpeayp ssprkalrri rqrsnsditi
      181 seldvdsfde cisptyktgp slhreygsts sidkqgtsge sffdllkgyk edksdrgptp
      241 tklsdflias ggkgsgfsld vidgpisqre nlrlfkerek plkrrskset gdssifrklr
      301 nakgeelgks sdlednrsed svrpwtcpkc fahydvqsil fdlneaimnr hnvikrrntt
      361 tgasaaavas lvsgplshsa sfsspmgste dlnskgslsm dqgddksnel vmscpyfrne
      421 iggegerkis lsksnsgsfs gcesasfest lsshctnagv avlevpkenl vlhldrvkry
      481 ivehvdlgay yyrkffyqke hwnyfgaden lgpvavsirr ekpeetkeng spynyriifr
      541 tselmtlrgs vledaipsta khstarglpl kevlehvipe lnvqclrlaf ntpkvteqlm
      601 kldeqglnyq qkvgimycka gqsteeemyn nesagpafee flqllgervr lkgfekyraq
      661 ldtktdstgt hslyttykdy eimfhvstml pytpnnkqql lrkrhigndi vtivfqepga
      721 qpfspknirs hfqhvfvivr ahnpctdsvc ysvavtrsrd vpsfgppipk gvtfpksnvf
      781 rdfllakvin aenaahksek framatrtrq eylkdlaekn vtntpidpsg kfpfislask
      841 kkekskpypg aelsslgaiv wavrakdynk ameidcllgv snefvvlieq etksvvfncs
      901 crdvigwtst daslkvfyer gecvsvesfv snddikeivr rlqfvskgce svemtlrrng
      961 lgqlgfhvny egivadvepy gyawqaglrq gsrlveickv avatlsheqm idllrtsvtv
     1021 kvviipphdd ctprrscset yrmpvmeykm negvsyefkf pfrnnnkwqr nankgphspq
     1081 vpsqvqspmt srlntgkadg kmppperaan iprsissdgr plerrlspgs diyvtvssma
     1141 larsqpcrns psslsssset gsgggtyrqk smpegfgisr rspasidrqn tqsdiggsgk
     1201 stpswqrsed siadqmeptc hlpavskilp afrespsgrl mrqdpvvhls pnkqghsdsh
     1261 ysshsssntl ssnassahsd ekwydgdrae aelssysylq gtsadsgidt tsygpshgst
     1321 aslgaatssp rsgpakekva plwhsssevi smadrtleae shgmdrkaes slsldihtks
     1381 pagsspltre nptfsisdaa shtstmssrh saspvvftsa rsspkeelhp aapsqltpsf
     1441 ssssssssgp rtfyprqgat skyligwkkp egtinsvgfm dtrkrhqsdg neiahprlra
     1501 strdlraspk ptskstieed lkklidlesp tpesqknfkf halsspqspf pttptsrral
     1561 hrtlsdesiy sgqrehffts raslldqalp ndvlfsstyp slptslplrr psytlgmksl
     1621 hgefsasdss ltdvqetrrp pmpdpglmpl pdaaadldws nlvdaakaye vqrasffaas
     1681 denhrplsaa snsdqledqa lvqmksysss kdssptlask vdqlegmlkm lredlkkeke
     1741 dkahlqaevq hlrednlrlq eesqnasdkl kkftewvfnt idms
//
LOCUS       XP_061012746            1784 aa            linear   MAM 02-DEC-2023
DEFINITION  signal-induced proliferation-associated 1-like protein 1 isoform X1
            [Dama dama].
ACCESSION   XP_061012746
VERSION     XP_061012746.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156763.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1784
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1784
                     /product="signal-induced proliferation-associated 1-like
                     protein 1 isoform X1"
                     /calculated_mol_wt=197124
     Region          629..809
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     Region          953..1025
                     /region_name="PDZ_SIPA1-like"
                     /note="PDZ domain of signal-induced
                     proliferation-associated protein 1 (SIPA1), and related
                     domains; cd06745"
                     /db_xref="CDD:467227"
     Site            order(963..969,975,978,1007,1011,1014..1015)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467227"
     Region          1484..1729
                     /region_name="SPAR_C"
                     /note="C-terminal domain of SPAR protein; pfam11881"
                     /db_xref="CDD:463383"
     Region          1717..1772
                     /region_name="ZapB"
                     /note="Cell division protein ZapB; pfam06005"
                     /db_xref="CDD:428718"
     CDS             1..1784
                     /gene="SIPA1L1"
                     /coded_by="XM_061156763.1:756..6110"
                     /db_xref="GeneID:133066062"
ORIGIN      
        1 mtslkrsqte rpvaterasv vgadgtpkvh tddfymrrfr sqngslgssv mapvgpprse
       61 gshhitstpg vpkmgvrari adwpprkenv kessrssqei etssclesls sksspvsqgs
      121 svslnssdsa mlksiqntlk nktrpsesmd srflmpeayp ssprkalrri rqrsnsditi
      181 seldvdsfde cisptyktgp slhreygsts sidkqgtsge sffdllkgyk edksdrgptp
      241 tklsdflias ggkgsgfsld vidgpisqre nlrlfkerek plkrrskset gdssifrklr
      301 nakgeelgks sdlednrsed svrpwtcpkc fahydvqsil fdlneaimnr hnvikrrntt
      361 tgasaaavas lvsgplshsa sfsspmgste dlnskgslsm dqgddksnel vmscpyfrne
      421 iggegerkis lsksnsgsfs gcesasfest lsshctnagv avlevpkenl vlhldrvkry
      481 ivehvdlgay yyrkffyqke hwnyfgaden lgpvavsirr ekpeetkeng spynyriifr
      541 tselmtlrgs vledaipsta khstarglpl kevlehvipe lnvqclrlaf ntpkvteqlm
      601 kldeqglnyq qkvgimycka gqsteeemyn nesagpafee flqllgervr lkgfekyraq
      661 ldtktdstgt hslyttykdy eimfhvstml pytpnnkqql lrkrhigndi vtivfqepga
      721 qpfspknirs hfqhvfvivr ahnpctdsvc ysvavtrsrd vpsfgppipk gvtfpksnvf
      781 rdfllakvin aenaahksek framatrtrq eylkdlaekn vtntpidpsg kfpfislask
      841 kkekskpypg aelsslgaiv wavrakdynk ameidcllgv snefvvlieq etksvvfncs
      901 crdvigwtst daslkvfyer gecvsvesfv snddikeivr rlqfvskgce svemtlrrng
      961 lgqlgfhvny egivadvepy gyawqaglrq gsrlveickv avatlsheqm idllrtsvtv
     1021 kvviipphdd ctprrscset yrmpvmeykm negvsyefkf pfrnnnkwqr nankgphspq
     1081 vpsqvqspmt srlntgkadg kmppperaan iprsissdgr plerrlspgs diyvtvssma
     1141 larsqpcrns psslsssset gsgggtyrqk smpegfgisr rspasidrqn tqsdiggsgk
     1201 stpswqrsed siadqmeptc hlpavskilp afrespsgrl mrqdpvvhls pnkqghsdsh
     1261 ysshsssntl ssnassahsd ekwydgdrae aelssysylq gtsadsgidt tsygpshgst
     1321 aslgaatssp rsgpakekva plwhsssevi smadrtleae shgmdrkaes slsldihtks
     1381 pagsspltre nptfsisdaa shtstmssrh saspvvftsa rsspkeelhp aapsqltpsf
     1441 ssssssssgp rtfyprqgat skyligwkkp egtinsvgfm dtrkrhqsdg neiahprlra
     1501 strdlraspk ptskstieed lkklidlesp tpesqknfkf halsspqspf pttptsrral
     1561 hrtlsdesiy sgqrehffts raslldqalp ndvlfsstyp slptslplrr psytlgmksl
     1621 hgefsasdss ltdvqetrrp pmpdpglmpl pdaaadldws nlvdaakaye vqrasffaas
     1681 denhrplsaa snsdqledqa lvqmksysss kdssptlask vdqlegmlkm lredlkkeke
     1741 dkahlqaevq hlrednlrlq eesqnasdkl kkftewvfnt idms
//
LOCUS       XP_061012747            1784 aa            linear   MAM 02-DEC-2023
DEFINITION  signal-induced proliferation-associated 1-like protein 1 isoform X1
            [Dama dama].
ACCESSION   XP_061012747
VERSION     XP_061012747.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156764.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1784
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1784
                     /product="signal-induced proliferation-associated 1-like
                     protein 1 isoform X1"
                     /calculated_mol_wt=197124
     Region          629..809
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     Region          953..1025
                     /region_name="PDZ_SIPA1-like"
                     /note="PDZ domain of signal-induced
                     proliferation-associated protein 1 (SIPA1), and related
                     domains; cd06745"
                     /db_xref="CDD:467227"
     Site            order(963..969,975,978,1007,1011,1014..1015)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467227"
     Region          1484..1729
                     /region_name="SPAR_C"
                     /note="C-terminal domain of SPAR protein; pfam11881"
                     /db_xref="CDD:463383"
     Region          1717..1772
                     /region_name="ZapB"
                     /note="Cell division protein ZapB; pfam06005"
                     /db_xref="CDD:428718"
     CDS             1..1784
                     /gene="SIPA1L1"
                     /coded_by="XM_061156764.1:956..6310"
                     /db_xref="GeneID:133066062"
ORIGIN      
        1 mtslkrsqte rpvaterasv vgadgtpkvh tddfymrrfr sqngslgssv mapvgpprse
       61 gshhitstpg vpkmgvrari adwpprkenv kessrssqei etssclesls sksspvsqgs
      121 svslnssdsa mlksiqntlk nktrpsesmd srflmpeayp ssprkalrri rqrsnsditi
      181 seldvdsfde cisptyktgp slhreygsts sidkqgtsge sffdllkgyk edksdrgptp
      241 tklsdflias ggkgsgfsld vidgpisqre nlrlfkerek plkrrskset gdssifrklr
      301 nakgeelgks sdlednrsed svrpwtcpkc fahydvqsil fdlneaimnr hnvikrrntt
      361 tgasaaavas lvsgplshsa sfsspmgste dlnskgslsm dqgddksnel vmscpyfrne
      421 iggegerkis lsksnsgsfs gcesasfest lsshctnagv avlevpkenl vlhldrvkry
      481 ivehvdlgay yyrkffyqke hwnyfgaden lgpvavsirr ekpeetkeng spynyriifr
      541 tselmtlrgs vledaipsta khstarglpl kevlehvipe lnvqclrlaf ntpkvteqlm
      601 kldeqglnyq qkvgimycka gqsteeemyn nesagpafee flqllgervr lkgfekyraq
      661 ldtktdstgt hslyttykdy eimfhvstml pytpnnkqql lrkrhigndi vtivfqepga
      721 qpfspknirs hfqhvfvivr ahnpctdsvc ysvavtrsrd vpsfgppipk gvtfpksnvf
      781 rdfllakvin aenaahksek framatrtrq eylkdlaekn vtntpidpsg kfpfislask
      841 kkekskpypg aelsslgaiv wavrakdynk ameidcllgv snefvvlieq etksvvfncs
      901 crdvigwtst daslkvfyer gecvsvesfv snddikeivr rlqfvskgce svemtlrrng
      961 lgqlgfhvny egivadvepy gyawqaglrq gsrlveickv avatlsheqm idllrtsvtv
     1021 kvviipphdd ctprrscset yrmpvmeykm negvsyefkf pfrnnnkwqr nankgphspq
     1081 vpsqvqspmt srlntgkadg kmppperaan iprsissdgr plerrlspgs diyvtvssma
     1141 larsqpcrns psslsssset gsgggtyrqk smpegfgisr rspasidrqn tqsdiggsgk
     1201 stpswqrsed siadqmeptc hlpavskilp afrespsgrl mrqdpvvhls pnkqghsdsh
     1261 ysshsssntl ssnassahsd ekwydgdrae aelssysylq gtsadsgidt tsygpshgst
     1321 aslgaatssp rsgpakekva plwhsssevi smadrtleae shgmdrkaes slsldihtks
     1381 pagsspltre nptfsisdaa shtstmssrh saspvvftsa rsspkeelhp aapsqltpsf
     1441 ssssssssgp rtfyprqgat skyligwkkp egtinsvgfm dtrkrhqsdg neiahprlra
     1501 strdlraspk ptskstieed lkklidlesp tpesqknfkf halsspqspf pttptsrral
     1561 hrtlsdesiy sgqrehffts raslldqalp ndvlfsstyp slptslplrr psytlgmksl
     1621 hgefsasdss ltdvqetrrp pmpdpglmpl pdaaadldws nlvdaakaye vqrasffaas
     1681 denhrplsaa snsdqledqa lvqmksysss kdssptlask vdqlegmlkm lredlkkeke
     1741 dkahlqaevq hlrednlrlq eesqnasdkl kkftewvfnt idms
//
LOCUS       XP_061012748            1784 aa            linear   MAM 02-DEC-2023
DEFINITION  signal-induced proliferation-associated 1-like protein 1 isoform X1
            [Dama dama].
ACCESSION   XP_061012748
VERSION     XP_061012748.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156765.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1784
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1784
                     /product="signal-induced proliferation-associated 1-like
                     protein 1 isoform X1"
                     /calculated_mol_wt=197124
     Region          629..809
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     Region          953..1025
                     /region_name="PDZ_SIPA1-like"
                     /note="PDZ domain of signal-induced
                     proliferation-associated protein 1 (SIPA1), and related
                     domains; cd06745"
                     /db_xref="CDD:467227"
     Site            order(963..969,975,978,1007,1011,1014..1015)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467227"
     Region          1484..1729
                     /region_name="SPAR_C"
                     /note="C-terminal domain of SPAR protein; pfam11881"
                     /db_xref="CDD:463383"
     Region          1717..1772
                     /region_name="ZapB"
                     /note="Cell division protein ZapB; pfam06005"
                     /db_xref="CDD:428718"
     CDS             1..1784
                     /gene="SIPA1L1"
                     /coded_by="XM_061156765.1:520..5874"
                     /db_xref="GeneID:133066062"
ORIGIN      
        1 mtslkrsqte rpvaterasv vgadgtpkvh tddfymrrfr sqngslgssv mapvgpprse
       61 gshhitstpg vpkmgvrari adwpprkenv kessrssqei etssclesls sksspvsqgs
      121 svslnssdsa mlksiqntlk nktrpsesmd srflmpeayp ssprkalrri rqrsnsditi
      181 seldvdsfde cisptyktgp slhreygsts sidkqgtsge sffdllkgyk edksdrgptp
      241 tklsdflias ggkgsgfsld vidgpisqre nlrlfkerek plkrrskset gdssifrklr
      301 nakgeelgks sdlednrsed svrpwtcpkc fahydvqsil fdlneaimnr hnvikrrntt
      361 tgasaaavas lvsgplshsa sfsspmgste dlnskgslsm dqgddksnel vmscpyfrne
      421 iggegerkis lsksnsgsfs gcesasfest lsshctnagv avlevpkenl vlhldrvkry
      481 ivehvdlgay yyrkffyqke hwnyfgaden lgpvavsirr ekpeetkeng spynyriifr
      541 tselmtlrgs vledaipsta khstarglpl kevlehvipe lnvqclrlaf ntpkvteqlm
      601 kldeqglnyq qkvgimycka gqsteeemyn nesagpafee flqllgervr lkgfekyraq
      661 ldtktdstgt hslyttykdy eimfhvstml pytpnnkqql lrkrhigndi vtivfqepga
      721 qpfspknirs hfqhvfvivr ahnpctdsvc ysvavtrsrd vpsfgppipk gvtfpksnvf
      781 rdfllakvin aenaahksek framatrtrq eylkdlaekn vtntpidpsg kfpfislask
      841 kkekskpypg aelsslgaiv wavrakdynk ameidcllgv snefvvlieq etksvvfncs
      901 crdvigwtst daslkvfyer gecvsvesfv snddikeivr rlqfvskgce svemtlrrng
      961 lgqlgfhvny egivadvepy gyawqaglrq gsrlveickv avatlsheqm idllrtsvtv
     1021 kvviipphdd ctprrscset yrmpvmeykm negvsyefkf pfrnnnkwqr nankgphspq
     1081 vpsqvqspmt srlntgkadg kmppperaan iprsissdgr plerrlspgs diyvtvssma
     1141 larsqpcrns psslsssset gsgggtyrqk smpegfgisr rspasidrqn tqsdiggsgk
     1201 stpswqrsed siadqmeptc hlpavskilp afrespsgrl mrqdpvvhls pnkqghsdsh
     1261 ysshsssntl ssnassahsd ekwydgdrae aelssysylq gtsadsgidt tsygpshgst
     1321 aslgaatssp rsgpakekva plwhsssevi smadrtleae shgmdrkaes slsldihtks
     1381 pagsspltre nptfsisdaa shtstmssrh saspvvftsa rsspkeelhp aapsqltpsf
     1441 ssssssssgp rtfyprqgat skyligwkkp egtinsvgfm dtrkrhqsdg neiahprlra
     1501 strdlraspk ptskstieed lkklidlesp tpesqknfkf halsspqspf pttptsrral
     1561 hrtlsdesiy sgqrehffts raslldqalp ndvlfsstyp slptslplrr psytlgmksl
     1621 hgefsasdss ltdvqetrrp pmpdpglmpl pdaaadldws nlvdaakaye vqrasffaas
     1681 denhrplsaa snsdqledqa lvqmksysss kdssptlask vdqlegmlkm lredlkkeke
     1741 dkahlqaevq hlrednlrlq eesqnasdkl kkftewvfnt idms
//
LOCUS       XP_061012749            1784 aa            linear   MAM 02-DEC-2023
DEFINITION  signal-induced proliferation-associated 1-like protein 1 isoform X1
            [Dama dama].
ACCESSION   XP_061012749
VERSION     XP_061012749.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156766.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1784
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1784
                     /product="signal-induced proliferation-associated 1-like
                     protein 1 isoform X1"
                     /calculated_mol_wt=197124
     Region          629..809
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     Region          953..1025
                     /region_name="PDZ_SIPA1-like"
                     /note="PDZ domain of signal-induced
                     proliferation-associated protein 1 (SIPA1), and related
                     domains; cd06745"
                     /db_xref="CDD:467227"
     Site            order(963..969,975,978,1007,1011,1014..1015)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467227"
     Region          1484..1729
                     /region_name="SPAR_C"
                     /note="C-terminal domain of SPAR protein; pfam11881"
                     /db_xref="CDD:463383"
     Region          1717..1772
                     /region_name="ZapB"
                     /note="Cell division protein ZapB; pfam06005"
                     /db_xref="CDD:428718"
     CDS             1..1784
                     /gene="SIPA1L1"
                     /coded_by="XM_061156766.1:742..6096"
                     /db_xref="GeneID:133066062"
ORIGIN      
        1 mtslkrsqte rpvaterasv vgadgtpkvh tddfymrrfr sqngslgssv mapvgpprse
       61 gshhitstpg vpkmgvrari adwpprkenv kessrssqei etssclesls sksspvsqgs
      121 svslnssdsa mlksiqntlk nktrpsesmd srflmpeayp ssprkalrri rqrsnsditi
      181 seldvdsfde cisptyktgp slhreygsts sidkqgtsge sffdllkgyk edksdrgptp
      241 tklsdflias ggkgsgfsld vidgpisqre nlrlfkerek plkrrskset gdssifrklr
      301 nakgeelgks sdlednrsed svrpwtcpkc fahydvqsil fdlneaimnr hnvikrrntt
      361 tgasaaavas lvsgplshsa sfsspmgste dlnskgslsm dqgddksnel vmscpyfrne
      421 iggegerkis lsksnsgsfs gcesasfest lsshctnagv avlevpkenl vlhldrvkry
      481 ivehvdlgay yyrkffyqke hwnyfgaden lgpvavsirr ekpeetkeng spynyriifr
      541 tselmtlrgs vledaipsta khstarglpl kevlehvipe lnvqclrlaf ntpkvteqlm
      601 kldeqglnyq qkvgimycka gqsteeemyn nesagpafee flqllgervr lkgfekyraq
      661 ldtktdstgt hslyttykdy eimfhvstml pytpnnkqql lrkrhigndi vtivfqepga
      721 qpfspknirs hfqhvfvivr ahnpctdsvc ysvavtrsrd vpsfgppipk gvtfpksnvf
      781 rdfllakvin aenaahksek framatrtrq eylkdlaekn vtntpidpsg kfpfislask
      841 kkekskpypg aelsslgaiv wavrakdynk ameidcllgv snefvvlieq etksvvfncs
      901 crdvigwtst daslkvfyer gecvsvesfv snddikeivr rlqfvskgce svemtlrrng
      961 lgqlgfhvny egivadvepy gyawqaglrq gsrlveickv avatlsheqm idllrtsvtv
     1021 kvviipphdd ctprrscset yrmpvmeykm negvsyefkf pfrnnnkwqr nankgphspq
     1081 vpsqvqspmt srlntgkadg kmppperaan iprsissdgr plerrlspgs diyvtvssma
     1141 larsqpcrns psslsssset gsgggtyrqk smpegfgisr rspasidrqn tqsdiggsgk
     1201 stpswqrsed siadqmeptc hlpavskilp afrespsgrl mrqdpvvhls pnkqghsdsh
     1261 ysshsssntl ssnassahsd ekwydgdrae aelssysylq gtsadsgidt tsygpshgst
     1321 aslgaatssp rsgpakekva plwhsssevi smadrtleae shgmdrkaes slsldihtks
     1381 pagsspltre nptfsisdaa shtstmssrh saspvvftsa rsspkeelhp aapsqltpsf
     1441 ssssssssgp rtfyprqgat skyligwkkp egtinsvgfm dtrkrhqsdg neiahprlra
     1501 strdlraspk ptskstieed lkklidlesp tpesqknfkf halsspqspf pttptsrral
     1561 hrtlsdesiy sgqrehffts raslldqalp ndvlfsstyp slptslplrr psytlgmksl
     1621 hgefsasdss ltdvqetrrp pmpdpglmpl pdaaadldws nlvdaakaye vqrasffaas
     1681 denhrplsaa snsdqledqa lvqmksysss kdssptlask vdqlegmlkm lredlkkeke
     1741 dkahlqaevq hlrednlrlq eesqnasdkl kkftewvfnt idms
//
LOCUS       XP_061012750            1783 aa            linear   MAM 02-DEC-2023
DEFINITION  signal-induced proliferation-associated 1-like protein 1 isoform X2
            [Dama dama].
ACCESSION   XP_061012750
VERSION     XP_061012750.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156767.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1783
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1783
                     /product="signal-induced proliferation-associated 1-like
                     protein 1 isoform X2"
                     /calculated_mol_wt=197037
     Region          629..809
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     Region          953..1025
                     /region_name="PDZ_SIPA1-like"
                     /note="PDZ domain of signal-induced
                     proliferation-associated protein 1 (SIPA1), and related
                     domains; cd06745"
                     /db_xref="CDD:467227"
     Site            order(963..969,975,978,1007,1011,1014..1015)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467227"
     Region          1484..1728
                     /region_name="SPAR_C"
                     /note="C-terminal domain of SPAR protein; pfam11881"
                     /db_xref="CDD:463383"
     Region          1716..1771
                     /region_name="ZapB"
                     /note="Cell division protein ZapB; pfam06005"
                     /db_xref="CDD:428718"
     CDS             1..1783
                     /gene="SIPA1L1"
                     /coded_by="XM_061156767.1:582..5933"
                     /db_xref="GeneID:133066062"
ORIGIN      
        1 mtslkrsqte rpvaterasv vgadgtpkvh tddfymrrfr sqngslgssv mapvgpprse
       61 gshhitstpg vpkmgvrari adwpprkenv kessrssqei etssclesls sksspvsqgs
      121 svslnssdsa mlksiqntlk nktrpsesmd srflmpeayp ssprkalrri rqrsnsditi
      181 seldvdsfde cisptyktgp slhreygsts sidkqgtsge sffdllkgyk edksdrgptp
      241 tklsdflias ggkgsgfsld vidgpisqre nlrlfkerek plkrrskset gdssifrklr
      301 nakgeelgks sdlednrsed svrpwtcpkc fahydvqsil fdlneaimnr hnvikrrntt
      361 tgasaaavas lvsgplshsa sfsspmgste dlnskgslsm dqgddksnel vmscpyfrne
      421 iggegerkis lsksnsgsfs gcesasfest lsshctnagv avlevpkenl vlhldrvkry
      481 ivehvdlgay yyrkffyqke hwnyfgaden lgpvavsirr ekpeetkeng spynyriifr
      541 tselmtlrgs vledaipsta khstarglpl kevlehvipe lnvqclrlaf ntpkvteqlm
      601 kldeqglnyq qkvgimycka gqsteeemyn nesagpafee flqllgervr lkgfekyraq
      661 ldtktdstgt hslyttykdy eimfhvstml pytpnnkqql lrkrhigndi vtivfqepga
      721 qpfspknirs hfqhvfvivr ahnpctdsvc ysvavtrsrd vpsfgppipk gvtfpksnvf
      781 rdfllakvin aenaahksek framatrtrq eylkdlaekn vtntpidpsg kfpfislask
      841 kkekskpypg aelsslgaiv wavrakdynk ameidcllgv snefvvlieq etksvvfncs
      901 crdvigwtst daslkvfyer gecvsvesfv snddikeivr rlqfvskgce svemtlrrng
      961 lgqlgfhvny egivadvepy gyawqaglrq gsrlveickv avatlsheqm idllrtsvtv
     1021 kvviipphdd ctprrscset yrmpvmeykm negvsyefkf pfrnnnkwqr nankgphspq
     1081 vpsqvqspmt srlntgkadg kmppperaan iprsissdgr plerrlspgs diyvtvssma
     1141 larsqpcrns psslsssset gsgggtyrqk smpegfgisr rspasidrqn tqsdiggsgk
     1201 stpswqrsed siadqmeptc hlpavskilp afrespsgrl mrqdpvvhls pnkqghsdsh
     1261 ysshsssntl ssnassahsd ekwydgdrae aelssysylq gtsadsgidt tsygpshgst
     1321 aslgaatssp rsgpakekva plwhsssevi smadrtleae shgmdrkaes slsldihtks
     1381 pagsspltre nptfsisdaa shtstmssrh saspvvftsa rsspkeelhp aapsqltpsf
     1441 ssssssssgp rtfyprqgat skyligwkkp egtinsvgfm dtrkrhqsdg neiahprlra
     1501 strdlraspk ptskstieed lkklidlesp tpesqknfkf halsspqspf pttptsrral
     1561 hrtlsdesiy sgqrehffts raslldqalp ndvlfsstyp slptslplrr psytlgmksl
     1621 hgefsasdss ltdvqetrrp pmpdpglmpl pdaaadldws nlvdaakaye vqrasffaas
     1681 denhrplsaa snsdqledqa lvqmksyssk dssptlaskv dqlegmlkml redlkkeked
     1741 kahlqaevqh lrednlrlqe esqnasdklk kftewvfnti dms
//
LOCUS       XP_061012751            1805 aa            linear   MAM 02-DEC-2023
DEFINITION  signal-induced proliferation-associated 1-like protein 1 isoform X3
            [Dama dama].
ACCESSION   XP_061012751
VERSION     XP_061012751.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156768.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1805
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1805
                     /product="signal-induced proliferation-associated 1-like
                     protein 1 isoform X3"
                     /calculated_mol_wt=199672
     Region          629..809
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     Region          953..1025
                     /region_name="PDZ_SIPA1-like"
                     /note="PDZ domain of signal-induced
                     proliferation-associated protein 1 (SIPA1), and related
                     domains; cd06745"
                     /db_xref="CDD:467227"
     Site            order(963..969,975,978,1007,1011,1014..1015)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467227"
     Region          1505..1750
                     /region_name="SPAR_C"
                     /note="C-terminal domain of SPAR protein; pfam11881"
                     /db_xref="CDD:463383"
     Region          1738..1793
                     /region_name="ZapB"
                     /note="Cell division protein ZapB; pfam06005"
                     /db_xref="CDD:428718"
     CDS             1..1805
                     /gene="SIPA1L1"
                     /coded_by="XM_061156768.1:582..5999"
                     /db_xref="GeneID:133066062"
ORIGIN      
        1 mtslkrsqte rpvaterasv vgadgtpkvh tddfymrrfr sqngslgssv mapvgpprse
       61 gshhitstpg vpkmgvrari adwpprkenv kessrssqei etssclesls sksspvsqgs
      121 svslnssdsa mlksiqntlk nktrpsesmd srflmpeayp ssprkalrri rqrsnsditi
      181 seldvdsfde cisptyktgp slhreygsts sidkqgtsge sffdllkgyk edksdrgptp
      241 tklsdflias ggkgsgfsld vidgpisqre nlrlfkerek plkrrskset gdssifrklr
      301 nakgeelgks sdlednrsed svrpwtcpkc fahydvqsil fdlneaimnr hnvikrrntt
      361 tgasaaavas lvsgplshsa sfsspmgste dlnskgslsm dqgddksnel vmscpyfrne
      421 iggegerkis lsksnsgsfs gcesasfest lsshctnagv avlevpkenl vlhldrvkry
      481 ivehvdlgay yyrkffyqke hwnyfgaden lgpvavsirr ekpeetkeng spynyriifr
      541 tselmtlrgs vledaipsta khstarglpl kevlehvipe lnvqclrlaf ntpkvteqlm
      601 kldeqglnyq qkvgimycka gqsteeemyn nesagpafee flqllgervr lkgfekyraq
      661 ldtktdstgt hslyttykdy eimfhvstml pytpnnkqql lrkrhigndi vtivfqepga
      721 qpfspknirs hfqhvfvivr ahnpctdsvc ysvavtrsrd vpsfgppipk gvtfpksnvf
      781 rdfllakvin aenaahksek framatrtrq eylkdlaekn vtntpidpsg kfpfislask
      841 kkekskpypg aelsslgaiv wavrakdynk ameidcllgv snefvvlieq etksvvfncs
      901 crdvigwtst daslkvfyer gecvsvesfv snddikeivr rlqfvskgce svemtlrrng
      961 lgqlgfhvny egivadvepy gyawqaglrq gsrlveickv avatlsheqm idllrtsvtv
     1021 kvviipphdd ctprrscset yrmpvmeykm negvsyefkf pfrnnnkwqr nankgphspq
     1081 vpsqvqspmt srlntgkadg kmppperaan iprsissdgr plerrlspgs diyvtvssma
     1141 larsqpcrns psslsssset gsgggtyrqk smpegfgisr rspasidrqn tqsdiggsgk
     1201 stpswqrsed siadqmaysy rgpqefnsfv leqheytept chlpavskil pafrespsgr
     1261 lmrqdpvvhl spnkqghsds hysshsssnt lssnassahs dekwydgdra eaelssysyl
     1321 qgtsadsgid ttsygpshgs taslgaatss prsgpakekv aplwhsssev ismadrtlea
     1381 eshgmdrkae sslsldihtk spagsspltr enptfsisda ashtstmssr hsaspvvfts
     1441 arsspkeelh paapsqltps fssssssssg prtfyprqga tskyligwkk pegtinsvgf
     1501 mdtrkrhqsd gneiahprlr astrdlrasp kptskstiee dlkklidles ptpesqknfk
     1561 fhalsspqsp fpttptsrra lhrtlsdesi ysgqrehfft sraslldqal pndvlfssty
     1621 pslptslplr rpsytlgmks lhgefsasds sltdvqetrr ppmpdpglmp lpdaaadldw
     1681 snlvdaakay evqrasffaa sdenhrplsa asnsdqledq alvqmksyss skdssptlas
     1741 kvdqlegmlk mlredlkkek edkahlqaev qhlrednlrl qeesqnasdk lkkftewvfn
     1801 tidms
//
LOCUS       XP_061012752            2340 aa            linear   MAM 02-DEC-2023
DEFINITION  pecanex-like protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061012752
VERSION     XP_061012752.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156769.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2340
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2340
                     /product="pecanex-like protein 1 isoform X1"
                     /calculated_mol_wt=257247
     Region          <335..737
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     Region          1781..2007
                     /region_name="Pecanex_C"
                     /note="Pecanex protein (C-terminus); pfam05041"
                     /db_xref="CDD:461533"
     CDS             1..2340
                     /gene="PCNX1"
                     /coded_by="XM_061156769.1:42..7064"
                     /db_xref="GeneID:133066064"
ORIGIN      
        1 mgsqtlqilr qgvwaalsgg wyydphqatf vnalhlylwl fllglpftly malpssmiiv
       61 avycpviaav fivlkmvnyr lhraldagei vdrnaneftd qrakteqgnc strrkdsngp
      121 sdpgggiema efireatppv gcssrnsyag ldpsnqigsg ssrlgtaati kgdtdtakts
      181 ddislslgqs sslckegsee qdlaadrklf rlvsndsfvs iqpslsscgq dlprdlsdrv
      241 slpshsrhqa eqplssacdt egaslvplhs hsyrkehrpr gvprtsssav afpdtslndf
      301 plyqqrrgld pvselesskp hsgskeslve nsclpgefql vgelknsnsq pptrsgkskp
      361 lnadksmdsl rslstrssgs tesycsgtdr dthstvssyr seqtssthve svlsehegsp
      421 qaakrsgqkr egsaeaeden scagdkrtss ektavdvstn sgvqeaqdsn gsddvhnqkg
      481 lstsaseean knphanefts qgdtplgkta gnkeeegekp avsvdskgsk dvggkqkegd
      541 vrpkssslih rtasahksgr rrtgkkrass fdssrhrdyv sfrgvsgtkp hsaifchded
      601 ssdqsdlsra ssvqsahqfs sdssssttsh scqspegrys alktkhapke rgtdsehthk
      661 ahlgpegagk krtarrtsst nsaktrarvl sldsstvacl ndssrlmape svkplttsks
      721 dleakegevl delsllgras qletvtrsrn slpsqvafpe geeqdavsga aqaseetvsf
      781 rrerstfrrq avrrrhnags npapptllig splslqdgqq gqqstaqvrv qsrppsqaav
      841 lsasasllvr ngsvhleash dsasavggss vhdelgkfss tlyetggcdm slvnfepaar
      901 rasnicdtds hvssstsvrf yphdvlslpq irlnrlltid tdlleqqdid lspdlaatyg
      961 pteeaahkvk hyyrfwilpq lwiginfdrl tllalfdrnr eilenvlavi lailvaflgs
     1021 illiqgffrd iwvfqfclvi ascqysllks vqpdsssprh ghnriiaysr pvyfclccgl
     1081 iwlldygsrn ltttkfklyg itftnplvli sardlvivft lcfpivffig llpqvntfvm
     1141 ylceqldihi fggnattsll aalysfvcsi vavallyglc ygalkdswdg qhipvlfsif
     1201 cgllvavsyh lsrqssdpsv lfslvqskif pkteeknped plsevkdplp eklrnsvser
     1261 lqsdlvvciv igvlyfaihv stvftvlqpa lkyvlyalvg fvgfvthyvl pqvrkqlpwh
     1321 cfshpllktl eynqyevrna atvmwfeklh vwllfvekni iyplivlnel sssaetiasp
     1381 kkldtelgal mitiaglkll rssfssptyq yvtviftvlf fkidyeafse tmlldlffms
     1441 ilfnklwell yklqfvytyi apwqitwgsa fhafaqpfav phsamlfvqa avsaffstpl
     1501 npflgsaifi tsyvrpvkfw erdyntkrvd hsntrlasql drnpgsddnn lnsifyehlt
     1561 rslqhslcgd lllgrwgnys tgdcfilasd ylnalvhlie ignglvtfql rglefrgtyc
     1621 qqreveaite gveedegfcc cepghiphvl sfnaafgqrw lawevivtky ilegysitdn
     1681 saasmlqvfd lrkvlttyyv kgiiyyvtts skleewlane tmqeglrlca drnyvdvdpt
     1741 fnpnidedyd hrlagisres fcviylswie ycssrrakpl dvdkdsslvt lcyglcvlgr
     1801 ralgtashhm ssnlesflyg lhalfkgdfr issirdewif admellrkvv vpgirmsikl
     1861 hqdhftspde yddptvlyea ivsheknlvi ahegdpawrs avlanspsll alrhvmddgt
     1921 neykiimlnr rylsfrvikv nkecvrglwa gqqqelvflr nrnpergsiq nakqalrnmi
     1981 nsscdqpigy pifvspltts ysdsheqlka ilggpislgn irnfivstwh rlrkgcgagc
     2041 nsggniedpd tgggpsstsn sattasdphs sasqgsagnp gqapgaglhp pvtsypptlg
     2101 tshsshsvqs glarqspara svasqssycy ssrhsslrms ttgfvpcrrs stsqislrnl
     2161 pssiqsrlsm vnqmepssqs gpacvphglp ssssssqsip ackhhtlvgf lgtdggqsca
     2221 advqpgstss pannshakkg eviyrvqivd pgqildginl skrkelqwpd egirlkagrn
     2281 swkdwspqeg meghvihrwv pcsrdpgtrs hidktvllvq iedkyvtvie tgvlelgaev
//
LOCUS       XP_061012753            2339 aa            linear   MAM 02-DEC-2023
DEFINITION  pecanex-like protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061012753
VERSION     XP_061012753.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156770.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2339
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2339
                     /product="pecanex-like protein 1 isoform X2"
                     /calculated_mol_wt=257176
     Region          <335..737
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     Region          1780..2006
                     /region_name="Pecanex_C"
                     /note="Pecanex protein (C-terminus); pfam05041"
                     /db_xref="CDD:461533"
     CDS             1..2339
                     /gene="PCNX1"
                     /coded_by="XM_061156770.1:42..7061"
                     /db_xref="GeneID:133066064"
ORIGIN      
        1 mgsqtlqilr qgvwaalsgg wyydphqatf vnalhlylwl fllglpftly malpssmiiv
       61 avycpviaav fivlkmvnyr lhraldagei vdrnaneftd qrakteqgnc strrkdsngp
      121 sdpgggiema efireatppv gcssrnsyag ldpsnqigsg ssrlgtaati kgdtdtakts
      181 ddislslgqs sslckegsee qdlaadrklf rlvsndsfvs iqpslsscgq dlprdlsdrv
      241 slpshsrhqa eqplssacdt egaslvplhs hsyrkehrpr gvprtsssav afpdtslndf
      301 plyqqrrgld pvselesskp hsgskeslve nsclpgefql vgelknsnsq pptrsgkskp
      361 lnadksmdsl rslstrssgs tesycsgtdr dthstvssyr seqtssthve svlsehegsp
      421 qaakrsgqkr egsaeaeden scagdkrtss ektavdvstn sgvqeaqdsn gsddvhnqkg
      481 lstsaseean knphanefts qgdtplgkta gnkeeegekp avsvdskgsk dvggkqkegd
      541 vrpkssslih rtasahksgr rrtgkkrass fdssrhrdyv sfrgvsgtkp hsaifchded
      601 ssdqsdlsra ssvqsahqfs sdssssttsh scqspegrys alktkhapke rgtdsehthk
      661 ahlgpegagk krtarrtsst nsaktrarvl sldsstvacl ndssrlmape svkplttsks
      721 dleakegevl delsllgras qletvtrsrn slpsqvafpe geeqdavsga qaseetvsfr
      781 rerstfrrqa vrrrhnagsn papptlligs plslqdgqqg qqstaqvrvq srppsqaavl
      841 sasasllvrn gsvhleashd sasavggssv hdelgkfsst lyetggcdms lvnfepaarr
      901 asnicdtdsh vssstsvrfy phdvlslpqi rlnrlltidt dlleqqdidl spdlaatygp
      961 teeaahkvkh yyrfwilpql wiginfdrlt llalfdrnre ilenvlavil ailvaflgsi
     1021 lliqgffrdi wvfqfclvia scqysllksv qpdsssprhg hnriiaysrp vyfclccgli
     1081 wlldygsrnl tttkfklygi tftnplvlis ardlvivftl cfpivffigl lpqvntfvmy
     1141 lceqldihif ggnattslla alysfvcsiv avallyglcy galkdswdgq hipvlfsifc
     1201 gllvavsyhl srqssdpsvl fslvqskifp kteeknpedp lsevkdplpe klrnsvserl
     1261 qsdlvvcivi gvlyfaihvs tvftvlqpal kyvlyalvgf vgfvthyvlp qvrkqlpwhc
     1321 fshpllktle ynqyevrnaa tvmwfeklhv wllfveknii yplivlnels ssaetiaspk
     1381 kldtelgalm itiaglkllr ssfssptyqy vtviftvlff kidyeafset mlldlffmsi
     1441 lfnklwelly klqfvytyia pwqitwgsaf hafaqpfavp hsamlfvqaa vsaffstpln
     1501 pflgsaifit syvrpvkfwe rdyntkrvdh sntrlasqld rnpgsddnnl nsifyehltr
     1561 slqhslcgdl llgrwgnyst gdcfilasdy lnalvhliei gnglvtfqlr glefrgtycq
     1621 qreveaiteg veedegfccc epghiphvls fnaafgqrwl awevivtkyi legysitdns
     1681 aasmlqvfdl rkvlttyyvk giiyyvttss kleewlanet mqeglrlcad rnyvdvdptf
     1741 npnidedydh rlagisresf cviylswiey cssrrakpld vdkdsslvtl cyglcvlgrr
     1801 algtashhms snlesflygl halfkgdfri ssirdewifa dmellrkvvv pgirmsiklh
     1861 qdhftspdey ddptvlyeai vsheknlvia hegdpawrsa vlanspslla lrhvmddgtn
     1921 eykiimlnrr ylsfrvikvn kecvrglwag qqqelvflrn rnpergsiqn akqalrnmin
     1981 sscdqpigyp ifvsplttsy sdsheqlkai lggpislgni rnfivstwhr lrkgcgagcn
     2041 sggniedpdt gggpsstsns attasdphss asqgsagnpg qapgaglhpp vtsypptlgt
     2101 shsshsvqsg larqsparas vasqssycys srhsslrmst tgfvpcrrss tsqislrnlp
     2161 ssiqsrlsmv nqmepssqsg pacvphglps sssssqsipa ckhhtlvgfl gtdggqscaa
     2221 dvqpgstssp annshakkge viyrvqivdp gqildginls krkelqwpde girlkagrns
     2281 wkdwspqegm eghvihrwvp csrdpgtrsh idktvllvqi edkyvtviet gvlelgaev
//
LOCUS       XP_061012754            2335 aa            linear   MAM 02-DEC-2023
DEFINITION  pecanex-like protein 1 isoform X3 [Dama dama].
ACCESSION   XP_061012754
VERSION     XP_061012754.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156771.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2335
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2335
                     /product="pecanex-like protein 1 isoform X3"
                     /calculated_mol_wt=256708
     Region          <335..737
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     Region          1776..2002
                     /region_name="Pecanex_C"
                     /note="Pecanex protein (C-terminus); pfam05041"
                     /db_xref="CDD:461533"
     CDS             1..2335
                     /gene="PCNX1"
                     /coded_by="XM_061156771.1:42..7049"
                     /db_xref="GeneID:133066064"
ORIGIN      
        1 mgsqtlqilr qgvwaalsgg wyydphqatf vnalhlylwl fllglpftly malpssmiiv
       61 avycpviaav fivlkmvnyr lhraldagei vdrnaneftd qrakteqgnc strrkdsngp
      121 sdpgggiema efireatppv gcssrnsyag ldpsnqigsg ssrlgtaati kgdtdtakts
      181 ddislslgqs sslckegsee qdlaadrklf rlvsndsfvs iqpslsscgq dlprdlsdrv
      241 slpshsrhqa eqplssacdt egaslvplhs hsyrkehrpr gvprtsssav afpdtslndf
      301 plyqqrrgld pvselesskp hsgskeslve nsclpgefql vgelknsnsq pptrsgkskp
      361 lnadksmdsl rslstrssgs tesycsgtdr dthstvssyr seqtssthve svlsehegsp
      421 qaakrsgqkr egsaeaeden scagdkrtss ektavdvstn sgvqeaqdsn gsddvhnqkg
      481 lstsaseean knphanefts qgdtplgkta gnkeeegekp avsvdskgsk dvggkqkegd
      541 vrpkssslih rtasahksgr rrtgkkrass fdssrhrdyv sfrgvsgtkp hsaifchded
      601 ssdqsdlsra ssvqsahqfs sdssssttsh scqspegrys alktkhapke rgtdsehthk
      661 ahlgpegagk krtarrtsst nsaktrarvl sldsstvacl ndssrlmape svkplttsks
      721 dleakegevl delsllgras qletvtrsrn slpsqvafpe geeqdavsga aqaseetvsf
      781 rrerstfrrq avrrrhnags npapptllig splslqdgqq gqqstaqvrv qsrppsqaav
      841 lsasasllvr ngsvhleash dsasavggss vhdelgkfss tlyetggcdm slvnfepaar
      901 rasnicdtds hvssstsvrf yphdvirlnr lltidtdlle qqdidlspdl aatygpteea
      961 ahkvkhyyrf wilpqlwigi nfdrltllal fdrnreilen vlavilailv aflgsilliq
     1021 gffrdiwvfq fclviascqy sllksvqpds ssprhghnri iaysrpvyfc lccgliwlld
     1081 ygsrnltttk fklygitftn plvlisardl vivftlcfpi vffigllpqv ntfvmylceq
     1141 ldihifggna ttsllaalys fvcsivaval lyglcygalk dswdgqhipv lfsifcgllv
     1201 avsyhlsrqs sdpsvlfslv qskifpktee knpedplsev kdplpeklrn svserlqsdl
     1261 vvcivigvly faihvstvft vlqpalkyvl yalvgfvgfv thyvlpqvrk qlpwhcfshp
     1321 llktleynqy evrnaatvmw feklhvwllf vekniiypli vlnelsssae tiaspkkldt
     1381 elgalmitia glkllrssfs sptyqyvtvi ftvlffkidy eafsetmlld lffmsilfnk
     1441 lwellyklqf vytyiapwqi twgsafhafa qpfavphsam lfvqaavsaf fstplnpflg
     1501 saifitsyvr pvkfwerdyn tkrvdhsntr lasqldrnpg sddnnlnsif yehltrslqh
     1561 slcgdlllgr wgnystgdcf ilasdylnal vhlieigngl vtfqlrglef rgtycqqrev
     1621 eaitegveed egfcccepgh iphvlsfnaa fgqrwlawev ivtkyilegy sitdnsaasm
     1681 lqvfdlrkvl ttyyvkgiiy yvttssklee wlanetmqeg lrlcadrnyv dvdptfnpni
     1741 dedydhrlag isresfcviy lswieycssr rakpldvdkd sslvtlcygl cvlgrralgt
     1801 ashhmssnle sflyglhalf kgdfrissir dewifadmel lrkvvvpgir msiklhqdhf
     1861 tspdeyddpt vlyeaivshe knlviahegd pawrsavlan spsllalrhv mddgtneyki
     1921 imlnrrylsf rvikvnkecv rglwagqqqe lvflrnrnpe rgsiqnakqa lrnminsscd
     1981 qpigypifvs plttsysdsh eqlkailggp islgnirnfi vstwhrlrkg cgagcnsggn
     2041 iedpdtgggp sstsnsatta sdphssasqg sagnpgqapg aglhppvtsy pptlgtshss
     2101 hsvqsglarq sparasvasq ssycyssrhs slrmsttgfv pcrrsstsqi slrnlpssiq
     2161 srlsmvnqme pssqsgpacv phglpsssss sqsipackhh tlvgflgtdg gqscaadvqp
     2221 gstsspanns hakkgeviyr vqivdpgqil dginlskrke lqwpdegirl kagrnswkdw
     2281 spqegmeghv ihrwvpcsrd pgtrshidkt vllvqiedky vtvietgvle lgaev
//
LOCUS       XP_061012756            2234 aa            linear   MAM 02-DEC-2023
DEFINITION  pecanex-like protein 1 isoform X4 [Dama dama].
ACCESSION   XP_061012756
VERSION     XP_061012756.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156773.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2234
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2234
                     /product="pecanex-like protein 1 isoform X4"
                     /calculated_mol_wt=246099
     Region          <335..737
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     Region          1675..1901
                     /region_name="Pecanex_C"
                     /note="Pecanex protein (C-terminus); pfam05041"
                     /db_xref="CDD:461533"
     CDS             1..2234
                     /gene="PCNX1"
                     /coded_by="XM_061156773.1:41..6745"
                     /db_xref="GeneID:133066064"
ORIGIN      
        1 mgsqtlqilr qgvwaalsgg wyydphqatf vnalhlylwl fllglpftly malpssmiiv
       61 avycpviaav fivlkmvnyr lhraldagei vdrnaneftd qrakteqgnc strrkdsngp
      121 sdpgggiema efireatppv gcssrnsyag ldpsnqigsg ssrlgtaati kgdtdtakts
      181 ddislslgqs sslckegsee qdlaadrklf rlvsndsfvs iqpslsscgq dlprdlsdrv
      241 slpshsrhqa eqplssacdt egaslvplhs hsyrkehrpr gvprtsssav afpdtslndf
      301 plyqqrrgld pvselesskp hsgskeslve nsclpgefql vgelknsnsq pptrsgkskp
      361 lnadksmdsl rslstrssgs tesycsgtdr dthstvssyr seqtssthve svlsehegsp
      421 qaakrsgqkr egsaeaeden scagdkrtss ektavdvstn sgvqeaqdsn gsddvhnqkg
      481 lstsaseean knphanefts qgdtplgkta gnkeeegekp avsvdskgsk dvggkqkegd
      541 vrpkssslih rtasahksgr rrtgkkrass fdssrhrdyv sfrgvsgtkp hsaifchded
      601 ssdqsdlsra ssvqsahqfs sdssssttsh scqspegrys alktkhapke rgtdsehthk
      661 ahlgpegagk krtarrtsst nsaktrarvl sldsstvacl ndssrlmape svkplttsks
      721 dleakegevl delsllgras qletvtrsrn slpsqvafpe geeqdavsgg kfsstlyetg
      781 gcdmslvnfe paarrasnic dtdshvssst svrfyphdvl slpqirlnrl ltidtdlleq
      841 qdidlspdla atygpteeaa hkvkhyyrfw ilpqlwigin fdrltllalf drnreilenv
      901 lavilailva flgsilliqg ffrdiwvfqf clviascqys llksvqpdss sprhghnrii
      961 aysrpvyfcl ccgliwlldy gsrnltttkf klygitftnp lvlisardlv ivftlcfpiv
     1021 ffigllpqvn tfvmylceql dihifggnat tsllaalysf vcsivavall yglcygalkd
     1081 swdgqhipvl fsifcgllva vsyhlsrqss dpsvlfslvq skifpkteek npedplsevk
     1141 dplpeklrns vserlqsdlv vcivigvlyf aihvstvftv lqpalkyvly alvgfvgfvt
     1201 hyvlpqvrkq lpwhcfshpl lktleynqye vrnaatvmwf eklhvwllfv ekniiypliv
     1261 lnelsssaet iaspkkldte lgalmitiag lkllrssfss ptyqyvtvif tvlffkidye
     1321 afsetmlldl ffmsilfnkl wellyklqfv ytyiapwqit wgsafhafaq pfavphsaml
     1381 fvqaavsaff stplnpflgs aifitsyvrp vkfwerdynt krvdhsntrl asqldrnpgs
     1441 ddnnlnsify ehltrslqhs lcgdlllgrw gnystgdcfi lasdylnalv hlieignglv
     1501 tfqlrglefr gtycqqreve aitegveede gfcccepghi phvlsfnaaf gqrwlawevi
     1561 vtkyilegys itdnsaasml qvfdlrkvlt tyyvkgiiyy vttsskleew lanetmqegl
     1621 rlcadrnyvd vdptfnpnid edydhrlagi sresfcviyl swieycssrr akpldvdkds
     1681 slvtlcyglc vlgrralgta shhmssnles flyglhalfk gdfrissird ewifadmell
     1741 rkvvvpgirm siklhqdhft spdeyddptv lyeaivshek nlviahegdp awrsavlans
     1801 psllalrhvm ddgtneykii mlnrrylsfr vikvnkecvr glwagqqqel vflrnrnper
     1861 gsiqnakqal rnminsscdq pigypifvsp lttsysdshe qlkailggpi slgnirnfiv
     1921 stwhrlrkgc gagcnsggni edpdtgggps stsnsattas dphssasqgs agnpgqapga
     1981 glhppvtsyp ptlgtshssh svqsglarqs parasvasqs sycyssrhss lrmsttgfvp
     2041 crrsstsqis lrnlpssiqs rlsmvnqmep ssqsgpacvp hglpssssss qsipackhht
     2101 lvgflgtdgg qscaadvqpg stsspannsh akkgeviyrv qivdpgqild ginlskrkel
     2161 qwpdegirlk agrnswkdws pqegmeghvi hrwvpcsrdp gtrshidktv llvqiedkyv
     2221 tvietgvlel gaev
//
LOCUS       XP_061012757            2229 aa            linear   MAM 02-DEC-2023
DEFINITION  pecanex-like protein 1 isoform X5 [Dama dama].
ACCESSION   XP_061012757
VERSION     XP_061012757.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156774.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2229
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2229
                     /product="pecanex-like protein 1 isoform X5"
                     /calculated_mol_wt=245560
     Region          <335..737
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     Region          1670..1896
                     /region_name="Pecanex_C"
                     /note="Pecanex protein (C-terminus); pfam05041"
                     /db_xref="CDD:461533"
     CDS             1..2229
                     /gene="PCNX1"
                     /coded_by="XM_061156774.1:41..6730"
                     /db_xref="GeneID:133066064"
ORIGIN      
        1 mgsqtlqilr qgvwaalsgg wyydphqatf vnalhlylwl fllglpftly malpssmiiv
       61 avycpviaav fivlkmvnyr lhraldagei vdrnaneftd qrakteqgnc strrkdsngp
      121 sdpgggiema efireatppv gcssrnsyag ldpsnqigsg ssrlgtaati kgdtdtakts
      181 ddislslgqs sslckegsee qdlaadrklf rlvsndsfvs iqpslsscgq dlprdlsdrv
      241 slpshsrhqa eqplssacdt egaslvplhs hsyrkehrpr gvprtsssav afpdtslndf
      301 plyqqrrgld pvselesskp hsgskeslve nsclpgefql vgelknsnsq pptrsgkskp
      361 lnadksmdsl rslstrssgs tesycsgtdr dthstvssyr seqtssthve svlsehegsp
      421 qaakrsgqkr egsaeaeden scagdkrtss ektavdvstn sgvqeaqdsn gsddvhnqkg
      481 lstsaseean knphanefts qgdtplgkta gnkeeegekp avsvdskgsk dvggkqkegd
      541 vrpkssslih rtasahksgr rrtgkkrass fdssrhrdyv sfrgvsgtkp hsaifchded
      601 ssdqsdlsra ssvqsahqfs sdssssttsh scqspegrys alktkhapke rgtdsehthk
      661 ahlgpegagk krtarrtsst nsaktrarvl sldsstvacl ndssrlmape svkplttsks
      721 dleakegevl delsllgras qletvtrsrn slpsqvafpe geeqdavsgg kfsstlyetg
      781 gcdmslvnfe paarrasnic dtdshvssst svrfyphdvi rlnrlltidt dlleqqdidl
      841 spdlaatygp teeaahkvkh yyrfwilpql wiginfdrlt llalfdrnre ilenvlavil
      901 ailvaflgsi lliqgffrdi wvfqfclvia scqysllksv qpdsssprhg hnriiaysrp
      961 vyfclccgli wlldygsrnl tttkfklygi tftnplvlis ardlvivftl cfpivffigl
     1021 lpqvntfvmy lceqldihif ggnattslla alysfvcsiv avallyglcy galkdswdgq
     1081 hipvlfsifc gllvavsyhl srqssdpsvl fslvqskifp kteeknpedp lsevkdplpe
     1141 klrnsvserl qsdlvvcivi gvlyfaihvs tvftvlqpal kyvlyalvgf vgfvthyvlp
     1201 qvrkqlpwhc fshpllktle ynqyevrnaa tvmwfeklhv wllfveknii yplivlnels
     1261 ssaetiaspk kldtelgalm itiaglkllr ssfssptyqy vtviftvlff kidyeafset
     1321 mlldlffmsi lfnklwelly klqfvytyia pwqitwgsaf hafaqpfavp hsamlfvqaa
     1381 vsaffstpln pflgsaifit syvrpvkfwe rdyntkrvdh sntrlasqld rnpgsddnnl
     1441 nsifyehltr slqhslcgdl llgrwgnyst gdcfilasdy lnalvhliei gnglvtfqlr
     1501 glefrgtycq qreveaiteg veedegfccc epghiphvls fnaafgqrwl awevivtkyi
     1561 legysitdns aasmlqvfdl rkvlttyyvk giiyyvttss kleewlanet mqeglrlcad
     1621 rnyvdvdptf npnidedydh rlagisresf cviylswiey cssrrakpld vdkdsslvtl
     1681 cyglcvlgrr algtashhms snlesflygl halfkgdfri ssirdewifa dmellrkvvv
     1741 pgirmsiklh qdhftspdey ddptvlyeai vsheknlvia hegdpawrsa vlanspslla
     1801 lrhvmddgtn eykiimlnrr ylsfrvikvn kecvrglwag qqqelvflrn rnpergsiqn
     1861 akqalrnmin sscdqpigyp ifvsplttsy sdsheqlkai lggpislgni rnfivstwhr
     1921 lrkgcgagcn sggniedpdt gggpsstsns attasdphss asqgsagnpg qapgaglhpp
     1981 vtsypptlgt shsshsvqsg larqsparas vasqssycys srhsslrmst tgfvpcrrss
     2041 tsqislrnlp ssiqsrlsmv nqmepssqsg pacvphglps sssssqsipa ckhhtlvgfl
     2101 gtdggqscaa dvqpgstssp annshakkge viyrvqivdp gqildginls krkelqwpde
     2161 girlkagrns wkdwspqegm eghvihrwvp csrdpgtrsh idktvllvqi edkyvtviet
     2221 gvlelgaev
//
LOCUS       XP_061012758            1080 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase 9 [Dama dama].
ACCESSION   XP_061012758
VERSION     XP_061012758.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156775.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1080
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1080
                     /product="mitogen-activated protein kinase kinase kinase
                     9"
                     /calculated_mol_wt=118849
     Region          54..111
                     /region_name="SH3_MLK1-3"
                     /note="Src Homology 3 domain of Mixed Lineage Kinases 1,
                     2, and 3; cd12059"
                     /db_xref="CDD:212992"
     Site            order(59,61,64,68,91..92,105,107..108)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212992"
     Region          135..404
                     /region_name="STKc_MLK1"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Mixed Lineage Kinase 1; cd14145"
                     /db_xref="CDD:271047"
     Site            order(148..152,156,167,169,202,218..221,225,227,266,268,
                     270..271,273,292,295,309..312)
                     /site_type="active"
                     /db_xref="CDD:271047"
     Site            order(148..152,156,167,169,202,218..221,225,266,268,
                     270..271,273,292)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271047"
     Site            order(152,225,227,266,268,270,295,309..312)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271047"
     Site            291..312
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271047"
     CDS             1..1080
                     /gene="MAP3K9"
                     /coded_by="XM_061156775.1:56..3298"
                     /db_xref="GeneID:133066065"
ORIGIN      
        1 mepssallgc lasaaaaapp gedgagagae eeeeeeeeaa aaprelgcga plpfwtavfe
       61 yeaagedelt lrlgdvvevl skdsqvsgde gwwtgqlnqr vgifpsnyvt prsafssrcq
      121 pggedpscyp piqlleidfa eltleeiigi ggfgkvyraf wigdevavka arhdpdedis
      181 qtienvrqea klfamlkhpn iialrgvclk epnlclvmef arggplnrvl sgkrippdil
      241 vnwavqiarg mnylhdeaiv piihrdlkss nililqkven gdlsnkvlki tdfglarewh
      301 rttkmsaagt yawmapevir asmfskgsdv wsygvllwel ltgevpfrgi dglavaygva
      361 mnklalpips tcpepfaklm edcwnpdphs rpsftsildq lttieesgff empkdsfhcl
      421 qddwkheiqe mfdqlrakek elrtweeelt raalqqknqe ellrrreqel aereidiler
      481 elniiihqlc qekprvkkrk gkfrksrlkl kdgnrislps dfqhkftvqa sptmdkrksl
      541 insrssppas ptiiprlrai qltpgesskt wgrssvvpke egeeeekrap kkkgrtwgps
      601 tlgqkefasg deglkslvdg ykqwsssapn lgkgprsspa lpgftslmem ededsegprs
      661 gesrlppspn qsylcipfpr gedgdgplsd ggheeptpvn satstpqltp tnslkrggph
      721 hrrcevallg cgavlaatgl gfdlleagkc qllppeepep pareekkrre glflrasrpr
      781 rstsppsrkl fkkeepvlll gdpsasltll slssisecns trsllrsdsd eivvyempvs
      841 pveapalspc trnplvnvrv erfkrdpkqs ltpthvtlta pvqpsahrrt psdgalkpaa
      901 ppasrspsss nglspspgag mlktpspsrd pgefprlpdp nvvfpptprr wntqqdstle
      961 rpktleflpr prpsanrqrl dpwwfvspsh arsaspanss stetpsnlds classsstve
     1021 erpglpallp fqagplppae rtlldldaeg qsqdstvplc raelnthrpa pyeiqqefws
//
LOCUS       XP_061012759             225 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 9A [Dama dama].
ACCESSION   XP_061012759
VERSION     XP_061012759.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156776.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..225
                     /product="tetratricopeptide repeat protein 9A"
                     /calculated_mol_wt=24406
     Region          32..>200
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          <127..>216
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          133..162
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          167..193
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..225
                     /gene="TTC9"
                     /coded_by="XM_061156776.1:1..678"
                     /db_xref="GeneID:133066066"
ORIGIN      
        1 merkgsaaga kgnpsppaag eaqrpqpplc vpgggggggg tpargqagaa aepaefirra
       61 hefksqgaqc ykdkkfreai gkyhrallel kgllpaager erdsrgaspa gapnpgrlse
      121 eqsktveaie idcynslaac llqaelvnye rvkeyclkvl kkegenfkal yrsgvafyhl
      181 gdydkalyyl keartrqptd tnviryiqlt emklsrcsqr ekeam
//
LOCUS       XP_061012760             246 aa            linear   MAM 02-DEC-2023
DEFINITION  mediator of RNA polymerase II transcription subunit 6 [Dama dama].
ACCESSION   XP_061012760
VERSION     XP_061012760.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156777.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..246
                     /product="mediator of RNA polymerase II transcription
                     subunit 6"
                     /calculated_mol_wt=28302
     Region          13..140
                     /region_name="Med6"
                     /note="MED6 mediator sub complex component; pfam04934"
                     /db_xref="CDD:461490"
     CDS             1..246
                     /gene="MED6"
                     /coded_by="XM_061156777.1:61..801"
                     /db_xref="GeneID:133066067"
ORIGIN      
        1 maavdirdnl lgiswvdssw ipilnsgsvl dyfsersnpf ydrtcnnevv kmqrltlehl
       61 nqmvgveyil lhaqepilfi irkqqrqspt qvipladyyi iagviyqapd lgsvinsrvl
      121 tavhgiqsaf deamsycryh pskgywwhfr dheeqdkvkp kvkrkeepss ifqrqrvdal
      181 lldlrqkfpp kfvqqksgek pvpvdqtkke aeplpetvks eeketaknvq qtvgtkgppe
      241 krmrlq
//
LOCUS       XP_061012761             107 aa            linear   MAM 02-DEC-2023
DEFINITION  cytochrome c oxidase assembly protein COX16 homolog, mitochondrial
            [Dama dama].
ACCESSION   XP_061012761
VERSION     XP_061012761.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156778.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..107
                     /product="cytochrome c oxidase assembly protein COX16
                     homolog, mitochondrial"
                     /calculated_mol_wt=12428
     Region          16..88
                     /region_name="COX16"
                     /note="Cytochrome c oxidase assembly protein COX16;
                     pfam14138"
                     /db_xref="CDD:464091"
     CDS             1..107
                     /gene="LOC133066068"
                     /coded_by="XM_061156778.1:150..473"
                     /db_xref="GeneID:133066068"
ORIGIN      
        1 mfayavrral rksktlrygv pmlllivggs fglrefsqir ydavkikidp elekrlkmnk
       61 vsleseyeki kdstfddwkn irgprpwedp dllqgrnpei lktnktt
//
LOCUS       XP_061012762             921 aa            linear   MAM 02-DEC-2023
DEFINITION  sodium/calcium exchanger 3 [Dama dama].
ACCESSION   XP_061012762
VERSION     XP_061012762.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156779.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..921
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..921
                     /product="sodium/calcium exchanger 3"
                     /calculated_mol_wt=102437
     Region          1..921
                     /region_name="caca"
                     /note="sodium/calcium exchanger 1; TIGR00845"
                     /db_xref="CDD:273296"
     CDS             1..921
                     /gene="SLC8A3"
                     /coded_by="XM_061156779.1:1177..3942"
                     /db_xref="GeneID:133066069"
ORIGIN      
        1 mawlrlqplt saflhfglit fvlflnglra eaggsgdvpn tgqnnesctg ssdckegvil
       61 piwypenpsl gdkiarvivy fvaliymflg vsiiadrfma sievitsqer evtikkpnge
      121 tstttirvwn etvsnltlma lgssapeill slievcghgf iagdlgpsti vgsaafnmfi
      181 iigicvyvip dgetrkikhl rvffvtaaws ifayiwlymi lavfspgvvq vweglltlff
      241 fpvcvllawv adkrllfyky mhkkyrtdkh rgiiietegd hpkgiemdgk mmnshfldgh
      301 lvplegkevd esrremiril kdlkqkhpek dldqlveman yyalshqqks rafyriqatr
      361 mmtgagnilk khaaeqakkt ssmsevhade pedfvskvff dpcsyqclen cgavlltvvr
      421 kggdtsktly vdyktedgsa nagadyefte gtvvlkpget qkdfsvgiid ddifeedehf
      481 fvrlsnvrme eeqpeegmsp rvlnslplpr avlvspcvat vtildddhag iftfecdtih
      541 vsesigvmev kvlrtsgarg tvivpfrtve gtakgggedf ediygelefk ndetvktvrv
      601 kivdeeeyer qenffivlge pkwmergise vtdrkltvee eeakriaemg kpilgehpkl
      661 eviieesyef kttvdklirk tnlalvvgth swrdqfmeai tvsaagdede desgeerlps
      721 cfdyvmhflt vfwkvlfacv ppteychgwa cfvvsiliig mltaiigdla shfgctiglk
      781 dsvtavifva fgtsvpdtfa skaaaiqdvy adasignvtg snavnvflgi glawsvaaiy
      841 walqgqefhv sagtlafsvt lftifafvci svllyrrrph lggelggprg cklattwlfv
      901 slwllyilfa tleaycyikg f
//
LOCUS       XP_061012763             145 aa            linear   MAM 02-DEC-2023
DEFINITION  synaptojanin-2-binding protein [Dama dama].
ACCESSION   XP_061012763
VERSION     XP_061012763.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156780.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..145
                     /product="synaptojanin-2-binding protein"
                     /calculated_mol_wt=15695
     Region          12..97
                     /region_name="PDZ_SYNJ2BP-like"
                     /note="PDZ domain of synaptojanin-2-binding protein
                     (SYNJ2BP), and related domains; cd06709"
                     /db_xref="CDD:467193"
     Site            order(22..28,45,48,78,82,85..86)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467193"
     CDS             1..145
                     /gene="SYNJ2BP"
                     /coded_by="XM_061156780.1:111..548"
                     /db_xref="GeneID:133066071"
ORIGIN      
        1 mngrvdyvvt eeeinltrgp sglgfnivgg tdqqyvsnds gifvsriken gaaaldgrlq
       61 egdkilsvng qdlknllhqd avdlfrnagy avslrvqhrl qvqngpigpq gegepsgipl
      121 tmvlvpvfal tmvaawafmr yrqrl
//
LOCUS       XP_061012764             446 aa            linear   MAM 02-DEC-2023
DEFINITION  SPARC-related modular calcium-binding protein 1 isoform X1 [Dama
            dama].
ACCESSION   XP_061012764
VERSION     XP_061012764.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156781.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..446
                     /product="SPARC-related modular calcium-binding protein 1
                     isoform X1"
                     /calculated_mol_wt=49458
     Region          47..87
                     /region_name="KAZAL_FS"
                     /note="Kazal type serine protease inhibitors and
                     follistatin-like domains. Kazal inhibitors inhibit serine
                     proteases, such as, trypsin, chyomotrypsin, avian
                     ovomucoids, and elastases. The inhibitory domain has one
                     reactive site peptide bond, which serves the...; cd00104"
                     /db_xref="CDD:238052"
     Region          95..158
                     /region_name="Thyroglobulin_1"
                     /note="Thyroglobulin type-1 repeat; pfam00086"
                     /db_xref="CDD:459665"
     Site            order(99,113,131,135)
                     /site_type="active"
                     /note="protease interaction site [active]"
                     /db_xref="CDD:238114"
     Region          159..230
                     /region_name="Thyroglob_assoc"
                     /note="Thyroglobulin_1 repeat associated disordered
                     domain; pfam16597"
                     /db_xref="CDD:435450"
     Region          238..303
                     /region_name="Thyroglobulin_1"
                     /note="Thyroglobulin type-1 repeat; pfam00086"
                     /db_xref="CDD:459665"
     Site            order(242,257,275,279)
                     /site_type="active"
                     /note="protease interaction site [active]"
                     /db_xref="CDD:238114"
     Region          326..440
                     /region_name="EFh_SPARC_SMOC1"
                     /note="EF-hand, extracellular calcium-binding (EC) motif,
                     found in secreted modular calcium-binding protein 1
                     (SMOC-1); cd16240"
                     /db_xref="CDD:320019"
     Region          371..403
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320019"
     Site            order(383,385,387,394,420,422,424,431)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320019"
     Region          408..440
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320019"
     CDS             1..446
                     /gene="SMOC1"
                     /coded_by="XM_061156781.1:61..1401"
                     /db_xref="GeneID:133066073"
ORIGIN      
        1 mlparcarll tphlllvllq lspardhrtt gprflisdrd pqcnlhcsrt qpkpvcasdg
       61 rsyesmceyq rakcrdptlg vvhrgrckda gqskcrlera qaleqakkpq eavfvpecte
      121 dgsftqvqch tytgycwcvt pdgkpisgss vqnktpvcsg svtdkpasqg nsgrkvsfrf
      181 fltlnsddgs kptptmetqp vfdgdeitap tlwikhlvik dsklnntnir nsekvhscdq
      241 erqsaleear qnpregivip ecapgglykp vqchqstgyc wcvlvdtgrp lpgtstryvm
      301 pscesdarak saevedpfkd relpgcpegk klefitslld alttdmvqai nsaaptgggr
      361 fsepdpshtl eervvhwyfs qldsnsssdi nkremkpfkr yvkkkakpkk carrftdycd
      421 lnkdkvislp elkgclgvsk evgrlv
//
LOCUS       XP_061012765             445 aa            linear   MAM 02-DEC-2023
DEFINITION  SPARC-related modular calcium-binding protein 1 isoform X2 [Dama
            dama].
ACCESSION   XP_061012765
VERSION     XP_061012765.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156782.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..445
                     /product="SPARC-related modular calcium-binding protein 1
                     isoform X2"
                     /calculated_mol_wt=49359
     Region          47..87
                     /region_name="KAZAL_FS"
                     /note="Kazal type serine protease inhibitors and
                     follistatin-like domains. Kazal inhibitors inhibit serine
                     proteases, such as, trypsin, chyomotrypsin, avian
                     ovomucoids, and elastases. The inhibitory domain has one
                     reactive site peptide bond, which serves the...; cd00104"
                     /db_xref="CDD:238052"
     Region          95..158
                     /region_name="Thyroglobulin_1"
                     /note="Thyroglobulin type-1 repeat; pfam00086"
                     /db_xref="CDD:459665"
     Site            order(99,113,131,135)
                     /site_type="active"
                     /note="protease interaction site [active]"
                     /db_xref="CDD:238114"
     Region          159..230
                     /region_name="Thyroglob_assoc"
                     /note="Thyroglobulin_1 repeat associated disordered
                     domain; pfam16597"
                     /db_xref="CDD:435450"
     Region          238..303
                     /region_name="Thyroglobulin_1"
                     /note="Thyroglobulin type-1 repeat; pfam00086"
                     /db_xref="CDD:459665"
     Site            order(242,257,275,279)
                     /site_type="active"
                     /note="protease interaction site [active]"
                     /db_xref="CDD:238114"
     Region          326..440
                     /region_name="EFh_SPARC_SMOC1"
                     /note="EF-hand, extracellular calcium-binding (EC) motif,
                     found in secreted modular calcium-binding protein 1
                     (SMOC-1); cd16240"
                     /db_xref="CDD:320019"
     Region          371..403
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320019"
     Site            order(383,385,387,394,420,422,424,431)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320019"
     Region          408..440
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320019"
     CDS             1..445
                     /gene="SMOC1"
                     /coded_by="XM_061156782.1:61..1398"
                     /db_xref="GeneID:133066073"
ORIGIN      
        1 mlparcarll tphlllvllq lspardhrtt gprflisdrd pqcnlhcsrt qpkpvcasdg
       61 rsyesmceyq rakcrdptlg vvhrgrckda gqskcrlera qaleqakkpq eavfvpecte
      121 dgsftqvqch tytgycwcvt pdgkpisgss vqnktpvcsg svtdkpasqg nsgrkvsfrf
      181 fltlnsddgs kptptmetqp vfdgdeitap tlwikhlvik dsklnntnir nsekvhscdq
      241 erqsaleear qnpregivip ecapgglykp vqchqstgyc wcvlvdtgrp lpgtstryvm
      301 pscesdarak saevedpfkd relpgcpegk klefitslld alttdmvqai nsaaptgggr
      361 fsepdpshtl eervvhwyfs qldsnsssdi nkremkpfkr yvkkkakpkk carrftdycd
      421 lnkdkvislp elkgclgvsk egrlv
//
LOCUS       XP_061012767             435 aa            linear   MAM 02-DEC-2023
DEFINITION  SPARC-related modular calcium-binding protein 1 isoform X3 [Dama
            dama].
ACCESSION   XP_061012767
VERSION     XP_061012767.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156784.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..435
                     /product="SPARC-related modular calcium-binding protein 1
                     isoform X3"
                     /calculated_mol_wt=48146
     Region          47..87
                     /region_name="KAZAL_FS"
                     /note="Kazal type serine protease inhibitors and
                     follistatin-like domains. Kazal inhibitors inhibit serine
                     proteases, such as, trypsin, chyomotrypsin, avian
                     ovomucoids, and elastases. The inhibitory domain has one
                     reactive site peptide bond, which serves the...; cd00104"
                     /db_xref="CDD:238052"
     Region          95..158
                     /region_name="Thyroglobulin_1"
                     /note="Thyroglobulin type-1 repeat; pfam00086"
                     /db_xref="CDD:459665"
     Site            order(99,113,131,135)
                     /site_type="active"
                     /note="protease interaction site [active]"
                     /db_xref="CDD:238114"
     Region          159..219
                     /region_name="Thyroglob_assoc"
                     /note="Thyroglobulin_1 repeat associated disordered
                     domain; pfam16597"
                     /db_xref="CDD:435450"
     Region          227..292
                     /region_name="Thyroglobulin_1"
                     /note="Thyroglobulin type-1 repeat; pfam00086"
                     /db_xref="CDD:459665"
     Site            order(231,246,264,268)
                     /site_type="active"
                     /note="protease interaction site [active]"
                     /db_xref="CDD:238114"
     Region          315..429
                     /region_name="EFh_SPARC_SMOC1"
                     /note="EF-hand, extracellular calcium-binding (EC) motif,
                     found in secreted modular calcium-binding protein 1
                     (SMOC-1); cd16240"
                     /db_xref="CDD:320019"
     Region          360..392
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320019"
     Site            order(372,374,376,383,409,411,413,420)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320019"
     Region          397..429
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320019"
     CDS             1..435
                     /gene="SMOC1"
                     /coded_by="XM_061156784.1:59..1366"
                     /db_xref="GeneID:133066073"
ORIGIN      
        1 mlparcarll tphlllvllq lspardhrtt gprflisdrd pqcnlhcsrt qpkpvcasdg
       61 rsyesmceyq rakcrdptlg vvhrgrckda gqskcrlera qaleqakkpq eavfvpecte
      121 dgsftqvqch tytgycwcvt pdgkpisgss vqnktpvcsg svtdkpasqg nsgrkddgsk
      181 ptptmetqpv fdgdeitapt lwikhlvikd sklnntnirn sekvhscdqe rqsaleearq
      241 npregivipe capgglykpv qchqstgycw cvlvdtgrpl pgtstryvmp scesdaraks
      301 aevedpfkdr elpgcpegkk lefitsllda lttdmvqain saaptgggrf sepdpshtle
      361 ervvhwyfsq ldsnsssdin kremkpfkry vkkkakpkkc arrftdycdl nkdkvislpe
      421 lkgclgvske vgrlv
//
LOCUS       XP_061012768             370 aa            linear   MAM 02-DEC-2023
DEFINITION  hepatic sodium/bile acid cotransporter [Dama dama].
ACCESSION   XP_061012768
VERSION     XP_061012768.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156785.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..370
                     /product="hepatic sodium/bile acid cotransporter"
                     /calculated_mol_wt=40144
     Region          22..311
                     /region_name="bass"
                     /note="bile acid transporter; TIGR00841"
                     /db_xref="CDD:188087"
     CDS             1..370
                     /gene="SLC10A1"
                     /coded_by="XM_061156785.1:251..1363"
                     /db_xref="GeneID:133066074"
ORIGIN      
        1 megfnesspf nfslphnfgk rptdralsvi lvimlltiml slgctmefsk ikahfwrpkg
       61 lavalvaqfg impltafglg kffqltnvea lailicgcsp ggnlsniftl aikgdmnlsi
      121 vmttcstffa lgmmplllyl ysrgiydgsl kdkvpyggiv islililipc ttgiilkskr
      181 pqyvryvtkg giillllcsv avvvlsalnv gksilfvmtp hllatsslmp figfllgyll
      241 salfclngrc krtvsmetgc qniqlcstil nvtfppevig plfffpllym ifqageglll
      301 vaifrcyekf kpsrgntkmt ykgdtteetl stalgngtyk geecnvgfts aspkdldsgq
      361 kateqlnvan
//
LOCUS       XP_061012769             300 aa            linear   MAM 02-DEC-2023
DEFINITION  sushi domain-containing protein 6 isoform X1 [Dama dama].
ACCESSION   XP_061012769
VERSION     XP_061012769.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156786.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..300
                     /product="sushi domain-containing protein 6 isoform X1"
                     /calculated_mol_wt=31565
     Region          42..103
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(52,75)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     CDS             1..300
                     /gene="SUSD6"
                     /coded_by="XM_061156786.1:325..1227"
                     /db_xref="GeneID:133066075"
ORIGIN      
        1 mchgriapks tsafavastg hgvflplvil stllgdglas vcslppepen ggyichprpc
       61 rdplnsgsvi eylcaegyml kgdykyltck ngewkpamei scrlnedkdt htslgvptls
      121 ivastassva lilllvvlfv llqpklksfh hsrrdqgvsg dqvsimvdgv qvalpsyeea
      181 vygtsghcmp padprvqivl segsgpsgrs gprephlqdq gacssagsee eapgqsglce
      241 awgsrgsetv mvhqattssw vagsgnsraa hkeapdsens diqsltsedy tddipllkea
//
LOCUS       XP_061012770             274 aa            linear   MAM 02-DEC-2023
DEFINITION  sushi domain-containing protein 6 isoform X2 [Dama dama].
ACCESSION   XP_061012770
VERSION     XP_061012770.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156787.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..274
                     /product="sushi domain-containing protein 6 isoform X2"
                     /calculated_mol_wt=29228
     Region          16..77
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(26,49)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     CDS             1..274
                     /gene="SUSD6"
                     /coded_by="XM_061156787.1:112..936"
                     /db_xref="GeneID:133066075"
ORIGIN      
        1 mltvpwrgkt nsrnvcslpp epenggyich prpcrdplns gsvieylcae gymlkgdyky
       61 ltckngewkp ameiscrlne dkdthtslgv ptlsivasta ssvalilllv vlfvllqpkl
      121 ksfhhsrrdq gvsgdqvsim vdgvqvalps yeeavygtsg hcmppadprv qivlsegsgp
      181 sgrsgpreph lqdqgacssa gseeeapgqs glceawgsrg setvmvhqat tsswvagsgn
      241 sraahkeapd sensdiqslt sedytddipl lkea
//
LOCUS       XP_061012771             272 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/arginine-rich splicing factor 5 isoform X1 [Dama dama].
ACCESSION   XP_061012771
VERSION     XP_061012771.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156788.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..272
                     /product="serine/arginine-rich splicing factor 5 isoform
                     X1"
                     /calculated_mol_wt=31133
     Region          5..74
                     /region_name="RRM1_SRSF5"
                     /note="RNA recognition motif 1 (RRM1) found in vertebrate
                     serine/arginine-rich splicing factor 5 (SRSF5); cd12595"
                     /db_xref="CDD:410008"
     Region          99..179
                     /region_name="RRM2_SRSF5"
                     /note="RNA recognition motif 2 (RRM2) found in vertebrate
                     serine/arginine-rich splicing factor 5 (SRSF5); cd12765"
                     /db_xref="CDD:410158"
     CDS             1..272
                     /gene="SRSF5"
                     /coded_by="XM_061156788.1:175..993"
                     /db_xref="GeneID:133066076"
ORIGIN      
        1 msgcrvfigr lnpaarekdv erffkgygri rdidlkrgfg fvefedprda ddavyeldgk
       61 elcservtie hararsrggr grgrysdrfs srrprndrrn appvrtenrl ivenlssrvs
      121 wqdlkdfmrq agevtfadah rpklnegvve fasygdlkna ieklsgkein grkikliegs
      181 krhsrsrsrs rsrtrsssrs rsrsrsrsrk sysrsrsrsr srsksrsvsr spvpeksqkr
      241 gsssrskspa svdrqrsrsr srsrsrsvds gn
//
LOCUS       XP_061012772             272 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/arginine-rich splicing factor 5 isoform X1 [Dama dama].
ACCESSION   XP_061012772
VERSION     XP_061012772.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156789.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..272
                     /product="serine/arginine-rich splicing factor 5 isoform
                     X1"
                     /calculated_mol_wt=31133
     Region          5..74
                     /region_name="RRM1_SRSF5"
                     /note="RNA recognition motif 1 (RRM1) found in vertebrate
                     serine/arginine-rich splicing factor 5 (SRSF5); cd12595"
                     /db_xref="CDD:410008"
     Region          99..179
                     /region_name="RRM2_SRSF5"
                     /note="RNA recognition motif 2 (RRM2) found in vertebrate
                     serine/arginine-rich splicing factor 5 (SRSF5); cd12765"
                     /db_xref="CDD:410158"
     CDS             1..272
                     /gene="SRSF5"
                     /coded_by="XM_061156789.1:175..993"
                     /db_xref="GeneID:133066076"
ORIGIN      
        1 msgcrvfigr lnpaarekdv erffkgygri rdidlkrgfg fvefedprda ddavyeldgk
       61 elcservtie hararsrggr grgrysdrfs srrprndrrn appvrtenrl ivenlssrvs
      121 wqdlkdfmrq agevtfadah rpklnegvve fasygdlkna ieklsgkein grkikliegs
      181 krhsrsrsrs rsrtrsssrs rsrsrsrsrk sysrsrsrsr srsksrsvsr spvpeksqkr
      241 gsssrskspa svdrqrsrsr srsrsrsvds gn
//
LOCUS       XP_061012773             272 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/arginine-rich splicing factor 5 isoform X1 [Dama dama].
ACCESSION   XP_061012773
VERSION     XP_061012773.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156790.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..272
                     /product="serine/arginine-rich splicing factor 5 isoform
                     X1"
                     /calculated_mol_wt=31133
     Region          5..74
                     /region_name="RRM1_SRSF5"
                     /note="RNA recognition motif 1 (RRM1) found in vertebrate
                     serine/arginine-rich splicing factor 5 (SRSF5); cd12595"
                     /db_xref="CDD:410008"
     Region          99..179
                     /region_name="RRM2_SRSF5"
                     /note="RNA recognition motif 2 (RRM2) found in vertebrate
                     serine/arginine-rich splicing factor 5 (SRSF5); cd12765"
                     /db_xref="CDD:410158"
     CDS             1..272
                     /gene="SRSF5"
                     /coded_by="XM_061156790.1:157..975"
                     /db_xref="GeneID:133066076"
ORIGIN      
        1 msgcrvfigr lnpaarekdv erffkgygri rdidlkrgfg fvefedprda ddavyeldgk
       61 elcservtie hararsrggr grgrysdrfs srrprndrrn appvrtenrl ivenlssrvs
      121 wqdlkdfmrq agevtfadah rpklnegvve fasygdlkna ieklsgkein grkikliegs
      181 krhsrsrsrs rsrtrsssrs rsrsrsrsrk sysrsrsrsr srsksrsvsr spvpeksqkr
      241 gsssrskspa svdrqrsrsr srsrsrsvds gn
//
LOCUS       XP_061012774             272 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/arginine-rich splicing factor 5 isoform X1 [Dama dama].
ACCESSION   XP_061012774
VERSION     XP_061012774.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156791.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..272
                     /product="serine/arginine-rich splicing factor 5 isoform
                     X1"
                     /calculated_mol_wt=31133
     Region          5..74
                     /region_name="RRM1_SRSF5"
                     /note="RNA recognition motif 1 (RRM1) found in vertebrate
                     serine/arginine-rich splicing factor 5 (SRSF5); cd12595"
                     /db_xref="CDD:410008"
     Region          99..179
                     /region_name="RRM2_SRSF5"
                     /note="RNA recognition motif 2 (RRM2) found in vertebrate
                     serine/arginine-rich splicing factor 5 (SRSF5); cd12765"
                     /db_xref="CDD:410158"
     CDS             1..272
                     /gene="SRSF5"
                     /coded_by="XM_061156791.1:76..894"
                     /db_xref="GeneID:133066076"
ORIGIN      
        1 msgcrvfigr lnpaarekdv erffkgygri rdidlkrgfg fvefedprda ddavyeldgk
       61 elcservtie hararsrggr grgrysdrfs srrprndrrn appvrtenrl ivenlssrvs
      121 wqdlkdfmrq agevtfadah rpklnegvve fasygdlkna ieklsgkein grkikliegs
      181 krhsrsrsrs rsrtrsssrs rsrsrsrsrk sysrsrsrsr srsksrsvsr spvpeksqkr
      241 gsssrskspa svdrqrsrsr srsrsrsvds gn
//
LOCUS       XP_061012775             271 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/arginine-rich splicing factor 5 isoform X2 [Dama dama].
ACCESSION   XP_061012775
VERSION     XP_061012775.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156792.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..271
                     /product="serine/arginine-rich splicing factor 5 isoform
                     X2"
                     /calculated_mol_wt=31046
     Region          5..74
                     /region_name="RRM1_SRSF5"
                     /note="RNA recognition motif 1 (RRM1) found in vertebrate
                     serine/arginine-rich splicing factor 5 (SRSF5); cd12595"
                     /db_xref="CDD:410008"
     Region          99..179
                     /region_name="RRM2_SRSF5"
                     /note="RNA recognition motif 2 (RRM2) found in vertebrate
                     serine/arginine-rich splicing factor 5 (SRSF5); cd12765"
                     /db_xref="CDD:410158"
     CDS             1..271
                     /gene="SRSF5"
                     /coded_by="XM_061156792.1:175..990"
                     /db_xref="GeneID:133066076"
ORIGIN      
        1 msgcrvfigr lnpaarekdv erffkgygri rdidlkrgfg fvefedprda ddavyeldgk
       61 elcservtie hararsrggr grgrysdrfs srrprndrrn appvrtenrl ivenlssrvs
      121 wqdlkdfmrq agevtfadah rpklnegvve fasygdlkna ieklsgkein grkikliegs
      181 krhrsrsrsr srtrsssrsr srsrsrsrks ysrsrsrsrs rsksrsvsrs pvpeksqkrg
      241 sssrskspas vdrqrsrsrs rsrsrsvdsg n
//
LOCUS       XP_061012776             313 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc transporter ZIP9 [Dama dama].
ACCESSION   XP_061012776
VERSION     XP_061012776.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156793.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..313
                     /product="zinc transporter ZIP9"
                     /calculated_mol_wt=32788
     Region          15..307
                     /region_name="Zip"
                     /note="ZIP Zinc transporter; pfam02535"
                     /db_xref="CDD:396884"
     CDS             1..313
                     /gene="SLC39A9"
                     /coded_by="XM_061156793.1:699..1640"
                     /db_xref="GeneID:133066079"
ORIGIN      
        1 mnkegrmddf isisllslam lvgcyvagii plavnfseer lklvtvlgag llcgtalavi
       61 vpegvhalye dilegkhhqa sqtqnviasd kaavipvahe hehshdhtql hayigvslvl
      121 gfvfmllvdq igsshvhstd dpetarpsns kitttlglvv haaadgvalg aaastsqtsv
      181 qlivfvaiml hkapaafglv sflmhagler nrirkhllvf alaapvmsmv tylglskssk
      241 ealsevnatg vamlfsagtf lyvatvhvlp evgglghshk pdptggrgls rlevaalvlg
      301 cliplvlsvg hqh
//
LOCUS       XP_061012777             313 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc transporter ZIP9 [Dama dama].
ACCESSION   XP_061012777
VERSION     XP_061012777.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156794.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..313
                     /product="zinc transporter ZIP9"
                     /calculated_mol_wt=32788
     Region          15..307
                     /region_name="Zip"
                     /note="ZIP Zinc transporter; pfam02535"
                     /db_xref="CDD:396884"
     CDS             1..313
                     /gene="SLC39A9"
                     /coded_by="XM_061156794.1:612..1553"
                     /db_xref="GeneID:133066079"
ORIGIN      
        1 mnkegrmddf isisllslam lvgcyvagii plavnfseer lklvtvlgag llcgtalavi
       61 vpegvhalye dilegkhhqa sqtqnviasd kaavipvahe hehshdhtql hayigvslvl
      121 gfvfmllvdq igsshvhstd dpetarpsns kitttlglvv haaadgvalg aaastsqtsv
      181 qlivfvaiml hkapaafglv sflmhagler nrirkhllvf alaapvmsmv tylglskssk
      241 ealsevnatg vamlfsagtf lyvatvhvlp evgglghshk pdptggrgls rlevaalvlg
      301 cliplvlsvg hqh
//
LOCUS       XP_061012779             104 aa            linear   MAM 02-DEC-2023
DEFINITION  enhancer of rudimentary homolog [Dama dama].
ACCESSION   XP_061012779
VERSION     XP_061012779.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156796.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..104
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..104
                     /product="enhancer of rudimentary homolog"
                     /calculated_mol_wt=12128
     Region          2..99
                     /region_name="ER"
                     /note="Enhancer of rudimentary; pfam01133"
                     /db_xref="CDD:460078"
     CDS             1..104
                     /gene="ERH"
                     /coded_by="XM_061156796.1:155..469"
                     /db_xref="GeneID:133066080"
ORIGIN      
        1 mshtillvqp tkrpegrtya dyesvnecme gvckmyeehl krmnpnspsi tydisqlfdf
       61 iddladlscl vyradtqtyq pynkdwikek iyvllrrqaq qagk
//
LOCUS       XP_061012780             557 aa            linear   MAM 02-DEC-2023
DEFINITION  polypeptide N-acetylgalactosaminyltransferase 16 [Dama dama].
ACCESSION   XP_061012780
VERSION     XP_061012780.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156797.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..557
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..557
                     /product="polypeptide N-acetylgalactosaminyltransferase
                     16"
                     /calculated_mol_wt=62643
     Region          126..420
                     /region_name="pp-GalNAc-T"
                     /note="pp-GalNAc-T initiates the formation of mucin-type
                     O-linked glycans; cd02510"
                     /db_xref="CDD:133004"
     Site            order(130..132,134,163,188,191,195,211..213,294..295,
                     317..318,320,345,348,353)
                     /site_type="active"
                     /note="ligand binding site [active]"
                     /db_xref="CDD:133004"
     Site            order(211,213,345)
                     /site_type="active"
                     /note="Mn binding site [active]"
                     /db_xref="CDD:133004"
     Region          426..556
                     /region_name="beta-trefoil_Ricin_GALNT16"
                     /note="ricin B-type lectin domain, beta-trefoil fold,
                     found in polypeptide N-acetylgalactosaminyltransferase 16
                     (GALNT16) and similar proteins; cd23479"
                     /db_xref="CDD:467357"
     Site            order(443..445,456,458,461,470..471)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:467357"
     Site            order(488..491,501,503,506,511..512)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:467357"
     Site            order(531..534,538,540,543,548..549)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:467357"
     CDS             1..557
                     /gene="GALNT16"
                     /coded_by="XM_061156797.1:268..1941"
                     /db_xref="GeneID:133066081"
ORIGIN      
        1 mrkiranaia iltvawilgt fyylwqdnra haassggrga kraggrpeql redrtipliv
       61 tgtpsrgfde kaylaakqlk pgedpyrqha fnqlesdkls pdrpirdtrh yscpsmsyss
      121 dlpatsviit fhnearstll rtvksvlnrt pasliqeiil vddfssdped cllltripkv
      181 kclrndrreg lirsrvrgad vaaaavltfl dshcevntew lqpmlqrvke dhtrvvspii
      241 dvisldnfay laasadlrgg fdwslhfkwe qipleqkiar tdptkpirtp viaggifvid
      301 kswfnhlgky daqmdiwgge nfelsfrvwm cggsleivpc srvghvfrkr hpynfpegna
      361 ltyirntkrt aevwmdeykq yyyearpsai gkafgsvatr ieqrkkmnck sfrwyldnvy
      421 peltipvkev lpgiikqgtn clesqgqdta gnfllgmgic rgsaknppaa qawlftdhli
      481 qqqgkclaat stsvspgslv vlqacnpreg rqrwrrkasf iqhsvsglcl eakpaqlvts
      541 kcqadvpaqq wqllpht
//
LOCUS       XP_061012781             557 aa            linear   MAM 02-DEC-2023
DEFINITION  polypeptide N-acetylgalactosaminyltransferase 16 [Dama dama].
ACCESSION   XP_061012781
VERSION     XP_061012781.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156798.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..557
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..557
                     /product="polypeptide N-acetylgalactosaminyltransferase
                     16"
                     /calculated_mol_wt=62643
     Region          126..420
                     /region_name="pp-GalNAc-T"
                     /note="pp-GalNAc-T initiates the formation of mucin-type
                     O-linked glycans; cd02510"
                     /db_xref="CDD:133004"
     Site            order(130..132,134,163,188,191,195,211..213,294..295,
                     317..318,320,345,348,353)
                     /site_type="active"
                     /note="ligand binding site [active]"
                     /db_xref="CDD:133004"
     Site            order(211,213,345)
                     /site_type="active"
                     /note="Mn binding site [active]"
                     /db_xref="CDD:133004"
     Region          426..556
                     /region_name="beta-trefoil_Ricin_GALNT16"
                     /note="ricin B-type lectin domain, beta-trefoil fold,
                     found in polypeptide N-acetylgalactosaminyltransferase 16
                     (GALNT16) and similar proteins; cd23479"
                     /db_xref="CDD:467357"
     Site            order(443..445,456,458,461,470..471)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:467357"
     Site            order(488..491,501,503,506,511..512)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:467357"
     Site            order(531..534,538,540,543,548..549)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:467357"
     CDS             1..557
                     /gene="GALNT16"
                     /coded_by="XM_061156798.1:227..1900"
                     /db_xref="GeneID:133066081"
ORIGIN      
        1 mrkiranaia iltvawilgt fyylwqdnra haassggrga kraggrpeql redrtipliv
       61 tgtpsrgfde kaylaakqlk pgedpyrqha fnqlesdkls pdrpirdtrh yscpsmsyss
      121 dlpatsviit fhnearstll rtvksvlnrt pasliqeiil vddfssdped cllltripkv
      181 kclrndrreg lirsrvrgad vaaaavltfl dshcevntew lqpmlqrvke dhtrvvspii
      241 dvisldnfay laasadlrgg fdwslhfkwe qipleqkiar tdptkpirtp viaggifvid
      301 kswfnhlgky daqmdiwgge nfelsfrvwm cggsleivpc srvghvfrkr hpynfpegna
      361 ltyirntkrt aevwmdeykq yyyearpsai gkafgsvatr ieqrkkmnck sfrwyldnvy
      421 peltipvkev lpgiikqgtn clesqgqdta gnfllgmgic rgsaknppaa qawlftdhli
      481 qqqgkclaat stsvspgslv vlqacnpreg rqrwrrkasf iqhsvsglcl eakpaqlvts
      541 kcqadvpaqq wqllpht
//
LOCUS       XP_061012782             628 aa            linear   MAM 02-DEC-2023
DEFINITION  exonuclease 3'-5' domain-containing protein 2 [Dama dama].
ACCESSION   XP_061012782
VERSION     XP_061012782.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156799.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..628
                     /product="exonuclease 3'-5' domain-containing protein 2"
                     /calculated_mol_wt=71116
     Region          89..265
                     /region_name="WRN_exo"
                     /note="DEDDy 3'-5' exonuclease domain of WRN and similar
                     proteins; cd06141"
                     /db_xref="CDD:176653"
     Site            order(115..118,173..174,176..178,213..214,249,253)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176653"
     Site            order(115,117,178,249,253)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176653"
     Site            order(116..118,173..174,176..177,213..214,249,253)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:176653"
     CDS             1..628
                     /gene="EXD2"
                     /coded_by="XM_061156799.1:148..2034"
                     /db_xref="GeneID:133066082"
ORIGIN      
        1 mskhlvaltv ttllgvavgg fvlwkgfkrr rsksspvtrq rllqqqqqqq qqqvpggrel
       61 papgedqlhs iaprasweer ilgakvmtvs qeaewdqiep slrseledfp vlgidcewvn
      121 segkasplsl lqmaspsgfc vlvrlpklic ggktlpktll diladgtilk vgvgcsedas
      181 kllqdyglvv kgcldlryla mrqrnnllsn glslkslset vlnfpldksl llrcsnwdae
      241 nltedqviya ardaqisval flhllgypfs rnstleendd hivwrkilek cqdvvdipfr
      301 skglsrsgee vngeatesqq kirnkkskad gtmpgnhqgr dprkhkrkpl gvgysarksp
      361 lydncflhap dgqplctcdr rkaqwyldkg igelvseepf vvklqfepag rpespgdyyl
      421 mvkenlcvvc gkkdsyirkn vipheyrkhf piemkdhnsh dvlllctsch aisnyydnhl
      481 kqqlarefqa pigseeglrl ledperrqvr sgarallnae slpahrkeel lqalrefyrt
      541 dtvteemlqe aasletrisn enyvphglkv vqhhtqgglr slmqlesrwr qhfldsmqpr
      601 hlpqqwsvdh nhqkllrkyg edlpikls
//
LOCUS       XP_061012783             628 aa            linear   MAM 02-DEC-2023
DEFINITION  exonuclease 3'-5' domain-containing protein 2 [Dama dama].
ACCESSION   XP_061012783
VERSION     XP_061012783.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156800.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..628
                     /product="exonuclease 3'-5' domain-containing protein 2"
                     /calculated_mol_wt=71116
     Region          89..265
                     /region_name="WRN_exo"
                     /note="DEDDy 3'-5' exonuclease domain of WRN and similar
                     proteins; cd06141"
                     /db_xref="CDD:176653"
     Site            order(115..118,173..174,176..178,213..214,249,253)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176653"
     Site            order(115,117,178,249,253)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176653"
     Site            order(116..118,173..174,176..177,213..214,249,253)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:176653"
     CDS             1..628
                     /gene="EXD2"
                     /coded_by="XM_061156800.1:435..2321"
                     /db_xref="GeneID:133066082"
ORIGIN      
        1 mskhlvaltv ttllgvavgg fvlwkgfkrr rsksspvtrq rllqqqqqqq qqqvpggrel
       61 papgedqlhs iaprasweer ilgakvmtvs qeaewdqiep slrseledfp vlgidcewvn
      121 segkasplsl lqmaspsgfc vlvrlpklic ggktlpktll diladgtilk vgvgcsedas
      181 kllqdyglvv kgcldlryla mrqrnnllsn glslkslset vlnfpldksl llrcsnwdae
      241 nltedqviya ardaqisval flhllgypfs rnstleendd hivwrkilek cqdvvdipfr
      301 skglsrsgee vngeatesqq kirnkkskad gtmpgnhqgr dprkhkrkpl gvgysarksp
      361 lydncflhap dgqplctcdr rkaqwyldkg igelvseepf vvklqfepag rpespgdyyl
      421 mvkenlcvvc gkkdsyirkn vipheyrkhf piemkdhnsh dvlllctsch aisnyydnhl
      481 kqqlarefqa pigseeglrl ledperrqvr sgarallnae slpahrkeel lqalrefyrt
      541 dtvteemlqe aasletrisn enyvphglkv vqhhtqgglr slmqlesrwr qhfldsmqpr
      601 hlpqqwsvdh nhqkllrkyg edlpikls
//
LOCUS       XP_061012784             947 aa            linear   MAM 02-DEC-2023
DEFINITION  DDB1- and CUL4-associated factor 5 isoform X1 [Dama dama].
ACCESSION   XP_061012784
VERSION     XP_061012784.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156801.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..947
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..947
                     /product="DDB1- and CUL4-associated factor 5 isoform X1"
                     /calculated_mol_wt=103958
     Region          <49..362
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          57..98
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          104..139
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          146..187
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          191..228
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          236..323
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          336..360
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          459..>759
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..947
                     /gene="DCAF5"
                     /coded_by="XM_061156801.1:41..2884"
                     /db_xref="GeneID:133066083"
ORIGIN      
        1 mkrraglggs mrsvvgflsq rglhgdpllt qdfqrrrlrg crnlykkdll ghfgcvnaie
       61 fsnnggqwlv sggddrrvll whmeqaihsr vkpiqlkgeh hsnifclafn sgntkvfsgg
      121 ndeqvilhdv essetldvfa hedavyglsv spvndnifas ssddgrvliw diresphgep
      181 fclanypsaf hsvmfnpvep rllatanske gvglwdirkp qssllryggn lslqsamsvr
      241 fnsngtqlla lrrrlppvly dihsrlpvfq fdnqgyfnsc tmksccfagd rdqyilsgsd
      301 dfnlymwrip adpeaggigr vvngafmvlk ghrsivnqvr fnphtymics sgvekiikiw
      361 spykqpgctg dldgriedds rclytheeyi slvlnsgsgl shdyanqsvq edprmmaffd
      421 slvrreiegw ssdsdsdlse stilqlhagv sersgytdse ssaslprspp ptvdesadsa
      481 fhlgplrvta tnvvastppl pscedatsrq qrlsalrryq dkrllalsne sdseenacev
      541 eldtdlfprp rspspedess ssssssssed eeelnerras trqrnamrrr qktpreerps
      601 appkptdtyi gednydypqi kvddlssspt sspersastl eiqpsraspt sdiesverki
      661 ykaykwlrys yisysnnkdg esslvsgead egragtshkd npapssskea clntataqrt
      721 qdlppegrsk dafkegtsai spshgpgpep sghpwaeape dasqdsnngg tvehtfetkk
      781 lngkalskal ssraeeppsp pvpkasgstl ssgsgnclrt qsddseersl eticanhnng
      841 rlhprpphph nngqnfaele alacsspgcv dtdhdnlslt gillhkdccg semacespsa
      901 gtredpidpp dtdssravhg hsglkrhrie ledtdsenss sekklkt
//
LOCUS       XP_061012785             946 aa            linear   MAM 02-DEC-2023
DEFINITION  DDB1- and CUL4-associated factor 5 isoform X2 [Dama dama].
ACCESSION   XP_061012785
VERSION     XP_061012785.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156802.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..946
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..946
                     /product="DDB1- and CUL4-associated factor 5 isoform X2"
                     /calculated_mol_wt=103871
     Region          <49..361
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          105..139
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          144..186
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          191..223
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          228..271
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          279..322
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          335..359
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          458..>758
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..946
                     /gene="DCAF5"
                     /coded_by="XM_061156802.1:41..2881"
                     /db_xref="GeneID:133066083"
ORIGIN      
        1 mkrraglggs mrsvvgflsq rglhgdpllt qdfqrrrlrg crnlykkdll ghfgcvnaie
       61 fsnnggqwlv sggddrrvll whmeqaihsr vkpiqlkgeh hsnifclafn sgntkvfsgg
      121 ndeqvilhdv esetldvfah edavyglsvs pvndnifass sddgrvliwd iresphgepf
      181 clanypsafh svmfnpvepr llatanskeg vglwdirkpq ssllryggnl slqsamsvrf
      241 nsngtqllal rrrlppvlyd ihsrlpvfqf dnqgyfnsct mksccfagdr dqyilsgsdd
      301 fnlymwripa dpeaggigrv vngafmvlkg hrsivnqvrf nphtymicss gvekiikiws
      361 pykqpgctgd ldgrieddsr clytheeyis lvlnsgsgls hdyanqsvqe dprmmaffds
      421 lvrreiegws sdsdsdlses tilqlhagvs ersgytdses saslprsppp tvdesadsaf
      481 hlgplrvtat nvvastpplp scedatsrqq rlsalrryqd krllalsnes dseenaceve
      541 ldtdlfprpr spspedesss sssssssede eelnerrast rqrnamrrrq ktpreerpsa
      601 ppkptdtyig ednydypqik vddlssspts spersastle iqpsraspts diesverkiy
      661 kaykwlrysy isysnnkdge sslvsgeade gragtshkdn papssskeac lntataqrtq
      721 dlppegrskd afkegtsais pshgpgpeps ghpwaeaped asqdsnnggt vehtfetkkl
      781 ngkalskals sraeeppspp vpkasgstls sgsgnclrtq sddseersle ticanhnngr
      841 lhprpphphn ngqnfaelea lacsspgcvd tdhdnlsltg illhkdccgs emacespsag
      901 tredpidppd tdssravhgh sglkrhriel edtdsensss ekklkt
//
LOCUS       XP_061012786             865 aa            linear   MAM 02-DEC-2023
DEFINITION  DDB1- and CUL4-associated factor 5 isoform X3 [Dama dama].
ACCESSION   XP_061012786
VERSION     XP_061012786.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156803.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..865
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..865
                     /product="DDB1- and CUL4-associated factor 5 isoform X3"
                     /calculated_mol_wt=94693
     Region          <10..280
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          22..58
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          64..103
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          108..150
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          155..190
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          200..248
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..865
                     /gene="DCAF5"
                     /coded_by="XM_061156803.1:119..2716"
                     /db_xref="GeneID:133066083"
ORIGIN      
        1 meqaihsrvk piqlkgehhs nifclafnsg ntkvfsggnd eqvilhdves setldvfahe
       61 davyglsvsp vndnifasss ddgrvliwdi resphgepfc lanypsafhs vmfnpveprl
      121 latanskegv glwdirkpqs sllryggnls lqsamsvrfn sngtqllalr rrlppvlydi
      181 hsrlpvfqfd nqgyfnsctm ksccfagdrd qyilsgsddf nlymwripad peaggigrvv
      241 ngafmvlkgh rsivnqvrfn phtymicssg vekiikiwsp ykqpgctgdl dgrieddsrc
      301 lytheeyisl vlnsgsglsh dyanqsvqed prmmaffdsl vrreiegwss dsdsdlsest
      361 ilqlhagvse rsgytdsess aslprspppt vdesadsafh lgplrvtatn vvastpplps
      421 cedatsrqqr lsalrryqdk rllalsnesd seenacevel dtdlfprprs pspedessss
      481 ssssssedee elnerrastr qrnamrrrqk tpreerpsap pkptdtyige dnydypqikv
      541 ddlsssptss persastlei qpsrasptsd iesverkiyk aykwlrysyi sysnnkdges
      601 slvsgeadeg ragtshkdnp apssskeacl ntataqrtqd lppegrskda fkegtsaisp
      661 shgpgpepsg hpwaeapeda sqdsnnggtv ehtfetkkln gkalskalss raeeppsppv
      721 pkasgstlss gsgnclrtqs ddseerslet icanhnngrl hprpphphnn gqnfaeleal
      781 acsspgcvdt dhdnlsltgi llhkdccgse macespsagt redpidppdt dssravhghs
      841 glkrhriele dtdsenssse kklkt
//
LOCUS       XP_061012787             892 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-actinin-1 isoform X1 [Dama dama].
ACCESSION   XP_061012787
VERSION     XP_061012787.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156804.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..892
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..892
                     /product="alpha-actinin-1 isoform X1"
                     /calculated_mol_wt=102850
     Region          28..132
                     /region_name="CH_ACTN_rpt1"
                     /note="first calponin homology (CH) domain found in the
                     alpha-actinin family; cd21214"
                     /db_xref="CDD:409063"
     Site            order(33,37,81,85..87,90..91,106..114,122,124..125,
                     128..129,131..132)
                     /site_type="other"
                     /note="actin binding site [polypeptide binding]"
                     /db_xref="CDD:409063"
     Site            order(48,50,74..76)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:409063"
     Region          136..250
                     /region_name="CH_ACTN_rpt2"
                     /note="second calponin homology (CH) domain found in the
                     alpha-actinin family; cd21216"
                     /db_xref="CDD:409065"
     Site            order(146,150,197..199,202..203,218..226,237,239..240,
                     243..244,246..247)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409065"
     Region          277..498
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            385..390
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          395..622
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            500..505
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          634..733
                     /region_name="Spectrin"
                     /note="Spectrin repeat; pfam00435"
                     /db_xref="CDD:395348"
     Region          750..817
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cd00051"
                     /db_xref="CDD:238008"
     Site            order(759,761,763,770,800,802,804,811)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238008"
     Region          822..888
                     /region_name="EFhand_Ca_insen"
                     /note="Ca2+ insensitive EF hand; pfam08726"
                     /db_xref="CDD:430177"
     CDS             1..892
                     /gene="ACTN1"
                     /coded_by="XM_061156804.1:135..2813"
                     /db_xref="GeneID:133066085"
ORIGIN      
        1 mdhydsqqtn dymqpeedwd rdllldpawe kqqrktftaw cnshlrkagt qienieedfr
       61 dglklmllle visgerlakp ergkmrvhki snvnkaldfi askgvklvsi gaeeivdgnv
      121 kmtlgmiwti ilrfaiqdis veetsakegl llwcqrktap yknvniqnfh iswkdglgfc
      181 alihrhrpel idygklrkdd pltnlntafd vaekyldipk mldaedivgt arpdekaimt
      241 yvssfyhafs gaqkaetaan rickvlavnq eneqlmedye klasdllewi rrtipwlenr
      301 apentmhamq qkledfrdyr rlhkppkvqe kcqleinfnt lqtklrlsnr pafmpsegrm
      361 vsdinnawgc leqaekgyee wllneirrle rldhlaekfr qkasiheawt dgkeamlrqk
      421 dyetatlsei kallkkheaf esdlaahqdr veqiaaiaqe lneldyydsp svnarcqkic
      481 dqwdnlgalt qkrrealert eklletidql yleyakraap fnnwmegame dlqdtfivht
      541 ieeiqgltta heqfkatlpd adkerlailg ihnevskivq tyhvnmagtn pyttitpqei
      601 ngkwdhvrql vprrdqalte eharqqhner lrkqfgaqan vigpwiqtkm eeigrisiem
      661 hgtledqlnh lrqyeksivn ykpkidqleg dhqliqeali fdnkhtnytm ehirvgweql
      721 lttiartine venqiltrda kgisqeqmne frasfnhfdr dhsgtlgpee fkaclislgy
      781 digndpqgea efarimsivd pnrlgvvtfq afidfmsret adtdtadqvm asfkilagdk
      841 nyitvdelrr elppdqaeyc iarmapytgp davpgaldym sfstalyges dl
//
LOCUS       XP_061012788             887 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-actinin-1 isoform X2 [Dama dama].
ACCESSION   XP_061012788
VERSION     XP_061012788.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156805.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..887
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..887
                     /product="alpha-actinin-1 isoform X2"
                     /calculated_mol_wt=102502
     Region          28..132
                     /region_name="CH_ACTN_rpt1"
                     /note="first calponin homology (CH) domain found in the
                     alpha-actinin family; cd21214"
                     /db_xref="CDD:409063"
     Site            order(33,37,81,85..87,90..91,106..114,122,124..125,
                     128..129,131..132)
                     /site_type="other"
                     /note="actin binding site [polypeptide binding]"
                     /db_xref="CDD:409063"
     Site            order(48,50,74..76)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:409063"
     Region          136..250
                     /region_name="CH_ACTN_rpt2"
                     /note="second calponin homology (CH) domain found in the
                     alpha-actinin family; cd21216"
                     /db_xref="CDD:409065"
     Site            order(146,150,197..199,202..203,218..226,237,239..240,
                     243..244,246..247)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409065"
     Region          277..498
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            385..390
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          395..622
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            500..505
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          634..733
                     /region_name="Spectrin"
                     /note="Spectrin repeat; pfam00435"
                     /db_xref="CDD:395348"
     Region          740..>844
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     Region          817..883
                     /region_name="EFhand_Ca_insen"
                     /note="Ca2+ insensitive EF hand; pfam08726"
                     /db_xref="CDD:430177"
     CDS             1..887
                     /gene="ACTN1"
                     /coded_by="XM_061156805.1:135..2798"
                     /db_xref="GeneID:133066085"
ORIGIN      
        1 mdhydsqqtn dymqpeedwd rdllldpawe kqqrktftaw cnshlrkagt qienieedfr
       61 dglklmllle visgerlakp ergkmrvhki snvnkaldfi askgvklvsi gaeeivdgnv
      121 kmtlgmiwti ilrfaiqdis veetsakegl llwcqrktap yknvniqnfh iswkdglgfc
      181 alihrhrpel idygklrkdd pltnlntafd vaekyldipk mldaedivgt arpdekaimt
      241 yvssfyhafs gaqkaetaan rickvlavnq eneqlmedye klasdllewi rrtipwlenr
      301 apentmhamq qkledfrdyr rlhkppkvqe kcqleinfnt lqtklrlsnr pafmpsegrm
      361 vsdinnawgc leqaekgyee wllneirrle rldhlaekfr qkasiheawt dgkeamlrqk
      421 dyetatlsei kallkkheaf esdlaahqdr veqiaaiaqe lneldyydsp svnarcqkic
      481 dqwdnlgalt qkrrealert eklletidql yleyakraap fnnwmegame dlqdtfivht
      541 ieeiqgltta heqfkatlpd adkerlailg ihnevskivq tyhvnmagtn pyttitpqei
      601 ngkwdhvrql vprrdqalte eharqqhner lrkqfgaqan vigpwiqtkm eeigrisiem
      661 hgtledqlnh lrqyeksivn ykpkidqleg dhqliqeali fdnkhtnytm ehirvgweql
      721 lttiartine venqiltrda kgisqeqmne frasfnhfdr kktgmmdtdd fraclismgy
      781 nmgeaefari msivdpnrlg vvtfqafidf msretadtdt adqvmasfki lagdknyitv
      841 delrrelppd qaeyciarma pytgpdavpg aldymsfsta lygesdl
//
LOCUS       XP_061012789             914 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-actinin-1 isoform X3 [Dama dama].
ACCESSION   XP_061012789
VERSION     XP_061012789.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156806.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..914
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..914
                     /product="alpha-actinin-1 isoform X3"
                     /calculated_mol_wt=105361
     Region          28..132
                     /region_name="CH_ACTN_rpt1"
                     /note="first calponin homology (CH) domain found in the
                     alpha-actinin family; cd21214"
                     /db_xref="CDD:409063"
     Site            order(33,37,81,85..87,90..91,106..114,122,124..125,
                     128..129,131..132)
                     /site_type="other"
                     /note="actin binding site [polypeptide binding]"
                     /db_xref="CDD:409063"
     Site            order(48,50,74..76)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:409063"
     Region          136..250
                     /region_name="CH_ACTN_rpt2"
                     /note="second calponin homology (CH) domain found in the
                     alpha-actinin family; cd21216"
                     /db_xref="CDD:409065"
     Site            order(146,150,197..199,202..203,218..226,237,239..240,
                     243..244,246..247)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409065"
     Region          277..498
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            385..390
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          395..622
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            500..505
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          634..733
                     /region_name="Spectrin"
                     /note="Spectrin repeat; pfam00435"
                     /db_xref="CDD:395348"
     Region          750..839
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cd00051"
                     /db_xref="CDD:238008"
     Site            order(759,761,763,770,822,824,826,833)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238008"
     Region          844..910
                     /region_name="EFhand_Ca_insen"
                     /note="Ca2+ insensitive EF hand; pfam08726"
                     /db_xref="CDD:430177"
     CDS             1..914
                     /gene="ACTN1"
                     /coded_by="XM_061156806.1:135..2879"
                     /db_xref="GeneID:133066085"
ORIGIN      
        1 mdhydsqqtn dymqpeedwd rdllldpawe kqqrktftaw cnshlrkagt qienieedfr
       61 dglklmllle visgerlakp ergkmrvhki snvnkaldfi askgvklvsi gaeeivdgnv
      121 kmtlgmiwti ilrfaiqdis veetsakegl llwcqrktap yknvniqnfh iswkdglgfc
      181 alihrhrpel idygklrkdd pltnlntafd vaekyldipk mldaedivgt arpdekaimt
      241 yvssfyhafs gaqkaetaan rickvlavnq eneqlmedye klasdllewi rrtipwlenr
      301 apentmhamq qkledfrdyr rlhkppkvqe kcqleinfnt lqtklrlsnr pafmpsegrm
      361 vsdinnawgc leqaekgyee wllneirrle rldhlaekfr qkasiheawt dgkeamlrqk
      421 dyetatlsei kallkkheaf esdlaahqdr veqiaaiaqe lneldyydsp svnarcqkic
      481 dqwdnlgalt qkrrealert eklletidql yleyakraap fnnwmegame dlqdtfivht
      541 ieeiqgltta heqfkatlpd adkerlailg ihnevskivq tyhvnmagtn pyttitpqei
      601 ngkwdhvrql vprrdqalte eharqqhner lrkqfgaqan vigpwiqtkm eeigrisiem
      661 hgtledqlnh lrqyeksivn ykpkidqleg dhqliqeali fdnkhtnytm ehirvgweql
      721 lttiartine venqiltrda kgisqeqmne frasfnhfdr dhsgtlgpee fkaclislgy
      781 digndpqkkt gmmdtddfra clismgynmg eaefarimsi vdpnrlgvvt fqafidfmsr
      841 etadtdtadq vmasfkilag dknyitvdel rrelppdqae yciarmapyt gpdavpgald
      901 ymsfstalyg esdl
//
LOCUS       XP_061012791             338 aa            linear   MAM 02-DEC-2023
DEFINITION  mRNA decay activator protein ZFP36L1 [Dama dama].
ACCESSION   XP_061012791
VERSION     XP_061012791.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156808.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..338
                     /product="mRNA decay activator protein ZFP36L1"
                     /calculated_mol_wt=36225
     Region          1..107
                     /region_name="Tis11B_N"
                     /note="Tis11B like protein, N terminus; pfam04553"
                     /db_xref="CDD:461350"
     Region          <101..>177
                     /region_name="CTH1"
                     /note="CCCH-type Zn-finger protein [General function
                     prediction only]; COG5063"
                     /db_xref="CDD:227395"
     CDS             1..338
                     /gene="ZFP36L1"
                     /coded_by="XM_061156808.1:174..1190"
                     /db_xref="GeneID:133066086"
ORIGIN      
        1 mtttlvsati fdlsevlckg nkmlnystps aggclldrka vgtpagggfp rrhsvtlpss
       61 kfhqnqllss lkgepapals srdsrfrdrs fseggerllp pqkqpgsgqv nssryktelc
      121 rpfeengack ygdkcqfahg ihelrsltrh pkyktelcrt fhtigfcpyg prchfihnae
      181 erralagard lsadrprlqh sfsfagfpsa aataaasgll dsptsitppp ilsaddllgs
      241 ptlpdgtnnp fafssqelas lfapsmglpg ggspttflfr pmsesphmfd sppspqdsls
      301 dqegylssss sshsgsdspt ldnsrrlpif srlsisdd
//
LOCUS       XP_061012792             364 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA repair protein RAD51 homolog 2 isoform X1 [Dama dama].
ACCESSION   XP_061012792
VERSION     XP_061012792.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156809.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..364
                     /product="DNA repair protein RAD51 homolog 2 isoform X1"
                     /calculated_mol_wt=39681
     Region          105..341
                     /region_name="Rad51B"
                     /note="RAD51B recombinase; cd19493"
                     /db_xref="CDD:410901"
     Site            order(125..130,158,224,272,326)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:410901"
     CDS             1..364
                     /gene="RAD51B"
                     /coded_by="XM_061156809.1:52..1146"
                     /db_xref="GeneID:133066087"
ORIGIN      
        1 mlqnpvlfla asggmgskkl rrvglsqelc drlnrhhivt cqdflclspl elmkmtglsy
       61 qgvhellcvv sracapqmqt ayeiktqrca ahssaflstt lsaldealhg gvacgsltei
      121 tgppgcgktq fcimmsilat lptnmggleg avvyidtesa fsaerlveia esrfpryfdt
      181 eekllltssk vhlyrelscd evlqriesle eeiiskgvkl vivdsvasvv rkefdtqlqg
      241 nmrernkfla reaaslkyla eefsipvilt nqitthlsga lasqadlvsp addlslsegt
      301 sgsscltaal gntwshsvnt rlilqylgse rrqiliaksp lapftafvyt iekeglvlqd
      361 qqrp
//
LOCUS       XP_061012793             298 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA repair protein RAD51 homolog 2 isoform X2 [Dama dama].
ACCESSION   XP_061012793
VERSION     XP_061012793.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156810.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..298
                     /product="DNA repair protein RAD51 homolog 2 isoform X2"
                     /calculated_mol_wt=32831
     Region          105..>266
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            order(127..129,154,156..157,224..225)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:410865"
     CDS             1..298
                     /gene="RAD51B"
                     /coded_by="XM_061156810.1:52..948"
                     /db_xref="GeneID:133066087"
ORIGIN      
        1 mlqnpvlfla asggmgskkl rrvglsqelc drlnrhhivt cqdflclspl elmkmtglsy
       61 qgvhellcvv sracapqmqt ayeiktqrca ahssaflstt lsaldealhg gvacgsltei
      121 tgppgcgktq fcimmsilat lptnmggleg avvyidtesa fsaerlveia esrfpryfdt
      181 eekllltssk vhlyrelscd evlqriesle eeiiskgvkl vivdsvasvv rkefdtqlqg
      241 nmrernkfla reaaslkyla eefsiplmff sdaretshgc qmtgpcwlia glwqclfp
//
LOCUS       XP_061012794            2534 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger FYVE domain-containing protein 26 isoform X1 [Dama
            dama].
ACCESSION   XP_061012794
VERSION     XP_061012794.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156811.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2534
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2534
                     /product="zinc finger FYVE domain-containing protein 26
                     isoform X1"
                     /calculated_mol_wt=282181
     Region          1804..1864
                     /region_name="FYVE_ZFY26"
                     /note="FYVE domain found in FYVE domain-containing protein
                     26 (ZFY26 or ZFYVE26); cd15724"
                     /db_xref="CDD:277263"
     Site            order(1804,1807,1826..1831,1833..1834,1857..1859)
                     /site_type="other"
                     /note="putative phosphatidylinositol 3-phosphate binding
                     site [chemical binding]"
                     /db_xref="CDD:277263"
     CDS             1..2534
                     /gene="ZFYVE26"
                     /coded_by="XM_061156811.1:183..7787"
                     /db_xref="GeneID:133066089"
ORIGIN      
        1 mhhpfgkeea asqkqllgff ceclrrgdwe lakacvpqlh eaqgdipkkv edilralvlc
       61 pnqlrcgqdi spqrlawvwl lvlekwlale kkllpagfrr kleflllsed lpsdisedil
      121 kelyavlahd rvdpvldgnl rqeswppgls peavsvlwdl lreapqvaqa llelllgevd
      181 gaglrgwplq kalvdlirea lrtlrgptaa ppgtvdaiyg alrtlrcpae ppgaelrllc
      241 eelleacrle gsplreeqll gcllhkagrd lvslyghtya ekatpsgkvp pdpldperam
      301 lalfsnpdpa hawklayfyc lsnnkhfleq ilvtaltllk eedfpslgcl lnrefrplsr
      361 llvllgwthc qslasaksll qtlhgtqdqd cdkllrdacd glwahlevle wcvqqssnpi
      421 pkrdllchlh ggdshsvlys lhhltnlpal reedvlkllq kvpakdpqqe hdsadalvpa
      481 hlsqsqnltl yrsfcamkya iyalcvnshq hsqcrqckds psedlasvae pmndpvsspg
      541 asdlfatyla rcqqylcsip dslclellen ifslllitsa dlhpephlpe dyaedddveg
      601 kgplglrsps espqhvaqpe rkseqgalgt arslayavps spkpepedss wephghsfld
      661 lkhftsgvsg fladefaiga flrllqeqld elsshsppek skllegqsgs gsrdglqgrl
      721 hqfskvlsea qwrykvvtsi qgseeqpsrr yrpittrhps lrrgrrtrrs raddrdkgsk
      781 pslentsseq ststsegsls aasgkneleg rlqpqphssl ipmmfsppes llascilrgn
      841 faeahqvvft fnlksshssg elmfmeryqe viqelarveh kienqnsdgg sstirrtgsg
      901 rstlqaigsa aaagmvfysi sdvtdkllst sgdpiptlqe dfwissspve ltaplkevle
      961 dlsppamaaf dlacsqcqlw ktgkqlleta errlngsles rgrrldhvfv nadgirgfpg
     1021 vlqqiskiln yplvsagqik sesgedkggg pprcsiaell qmcwpslted cvashaslsq
     1081 qleqilqslr ealelpeprs tplsslveqv aqkapeaeah pvyiqaqllq knlgkqtaag
     1141 gkqtdymgtf fkycstlaav flrslssepd hvevkvgnpf vllqqsssql vshlllerqv
     1201 ppdrlaalla reglslsvpq vivncccepl tlcssrqsqq tsalltrlgt laqlhtshcl
     1261 gdlplstlss pkptenpvle rkppssprds pppaltssal aflksrskll atvaclgasr
     1321 gskvtkpsls wkelrgrrev pltaeqvare cerlleqfpl leasllaawe plrgsseqgq
     1381 slaaslcgqa slstvllglh sptaldvlte afeealvard wrralqltnv ygqdgddlss
     1441 iqdavlccaa acdkegwqyl favkdaclrs rltlqfvdrw plewcleila yclsdtavqd
     1501 gleyelrrkl aelqvyqkil glqstpmwcd wqalrnccae dpstvmnlil eakeyelcee
     1561 wgclypipre hlinlhqkhl lhllergdhe kalqllqrip dptmclevte qsldqhpsla
     1621 tshflanylt tyfygelttd rhreiqalym gskvlltlpe qhrasyshls snpllmleql
     1681 lmnmkvdwat vavqtlrqll agqeigftld qvdsllsrya gkaldfpypl rekrsdsvth
     1741 lqeivsqasd letlsrspsa efssaaapgv pivhspslre rrfpqnqlpl efvppatppa
     1801 rhqwvpdese svcmvccrer ftmfnrrhhc rrcgrlvcss cstkkmvveg crenptrvcd
     1861 qcysyfnkdi peenpgqpea pdssksespp ysavvrvpka aevewildln eeenelvrse
     1921 fyyeqapsas lciailnlhe dsvacghqli ehccrlsqgl tnpevdagll tdimkqllfs
     1981 akmmfvkagq sqdlalcdsy iskvdvlnil vaaayrhvps ldqilqpaav trlrnqllea
     2041 eyyqlgvevs tktgldttga whawgmaclk agnltaarek fsrclkppld lnqlshgsrl
     2101 vqevveyles tarpllsvqd ddflatlkel eatlrtqsls levipegkil nntyyqeclf
     2161 ylhnysthla iisfyvrhsc lreallhllh kesppevfie gifqpsyksg klhdlenlle
     2221 sidssleswg kyliaacqhl qkknyyhily elqqfmkdhv raamtcirff thkaktytel
     2281 geklswllka kdhlkiylqe tsrrsgrkkt tffrkkmtas dvsrhmntlq lqmevtrflh
     2341 rcesagtsqv tasplptlfg nnhmkmdvac kvmlggknve dgfgiafrvl qdfqldaaat
     2401 yckaarqlve rekyseiqql lkcvsesgma aqsdgdtvll ncveafrrip pqelegliqa
     2461 ihsddnkvqa yltccklrsa yliavkqehs raavlvervq qaakssgdav vqdicsqwll
     2521 tsrsrgahgs asrk
//
LOCUS       XP_061012795            2028 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger FYVE domain-containing protein 26 isoform X2 [Dama
            dama].
ACCESSION   XP_061012795
VERSION     XP_061012795.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156812.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2028
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2028
                     /product="zinc finger FYVE domain-containing protein 26
                     isoform X2"
                     /calculated_mol_wt=224502
     Region          1804..1864
                     /region_name="FYVE_ZFY26"
                     /note="FYVE domain found in FYVE domain-containing protein
                     26 (ZFY26 or ZFYVE26); cd15724"
                     /db_xref="CDD:277263"
     Site            order(1804,1807,1826..1831,1833..1834,1857..1859)
                     /site_type="other"
                     /note="putative phosphatidylinositol 3-phosphate binding
                     site [chemical binding]"
                     /db_xref="CDD:277263"
     CDS             1..2028
                     /gene="ZFYVE26"
                     /coded_by="XM_061156812.1:183..6269"
                     /db_xref="GeneID:133066089"
ORIGIN      
        1 mhhpfgkeea asqkqllgff ceclrrgdwe lakacvpqlh eaqgdipkkv edilralvlc
       61 pnqlrcgqdi spqrlawvwl lvlekwlale kkllpagfrr kleflllsed lpsdisedil
      121 kelyavlahd rvdpvldgnl rqeswppgls peavsvlwdl lreapqvaqa llelllgevd
      181 gaglrgwplq kalvdlirea lrtlrgptaa ppgtvdaiyg alrtlrcpae ppgaelrllc
      241 eelleacrle gsplreeqll gcllhkagrd lvslyghtya ekatpsgkvp pdpldperam
      301 lalfsnpdpa hawklayfyc lsnnkhfleq ilvtaltllk eedfpslgcl lnrefrplsr
      361 llvllgwthc qslasaksll qtlhgtqdqd cdkllrdacd glwahlevle wcvqqssnpi
      421 pkrdllchlh ggdshsvlys lhhltnlpal reedvlkllq kvpakdpqqe hdsadalvpa
      481 hlsqsqnltl yrsfcamkya iyalcvnshq hsqcrqckds psedlasvae pmndpvsspg
      541 asdlfatyla rcqqylcsip dslclellen ifslllitsa dlhpephlpe dyaedddveg
      601 kgplglrsps espqhvaqpe rkseqgalgt arslayavps spkpepedss wephghsfld
      661 lkhftsgvsg fladefaiga flrllqeqld elsshsppek skllegqsgs gsrdglqgrl
      721 hqfskvlsea qwrykvvtsi qgseeqpsrr yrpittrhps lrrgrrtrrs raddrdkgsk
      781 pslentsseq ststsegsls aasgkneleg rlqpqphssl ipmmfsppes llascilrgn
      841 faeahqvvft fnlksshssg elmfmeryqe viqelarveh kienqnsdgg sstirrtgsg
      901 rstlqaigsa aaagmvfysi sdvtdkllst sgdpiptlqe dfwissspve ltaplkevle
      961 dlsppamaaf dlacsqcqlw ktgkqlleta errlngsles rgrrldhvfv nadgirgfpg
     1021 vlqqiskiln yplvsagqik sesgedkggg pprcsiaell qmcwpslted cvashaslsq
     1081 qleqilqslr ealelpeprs tplsslveqv aqkapeaeah pvyiqaqllq knlgkqtaag
     1141 gkqtdymgtf fkycstlaav flrslssepd hvevkvgnpf vllqqsssql vshlllerqv
     1201 ppdrlaalla reglslsvpq vivncccepl tlcssrqsqq tsalltrlgt laqlhtshcl
     1261 gdlplstlss pkptenpvle rkppssprds pppaltssal aflksrskll atvaclgasr
     1321 gskvtkpsls wkelrgrrev pltaeqvare cerlleqfpl leasllaawe plrgsseqgq
     1381 slaaslcgqa slstvllglh sptaldvlte afeealvard wrralqltnv ygqdgddlss
     1441 iqdavlccaa acdkegwqyl favkdaclrs rltlqfvdrw plewcleila yclsdtavqd
     1501 gleyelrrkl aelqvyqkil glqstpmwcd wqalrnccae dpstvmnlil eakeyelcee
     1561 wgclypipre hlinlhqkhl lhllergdhe kalqllqrip dptmclevte qsldqhpsla
     1621 tshflanylt tyfygelttd rhreiqalym gskvlltlpe qhrasyshls snpllmleql
     1681 lmnmkvdwat vavqtlrqll agqeigftld qvdsllsrya gkaldfpypl rekrsdsvth
     1741 lqeivsqasd letlsrspsa efssaaapgv pivhspslre rrfpqnqlpl efvppatppa
     1801 rhqwvpdese svcmvccrer ftmfnrrhhc rrcgrlvcss cstkkmvveg crenptrvcd
     1861 qcysyfnkdi peenpgqpea pdssksespp ysavvrvpka aevewildln eeenelvrse
     1921 fyyeqapsas lciailnlhe dsvacghqli ehccrlsqgl tnpevdagll tdimkqllfs
     1981 akmmfvkagq sqdlalcdsc crlspraisg sdlatgcgnq aqepalgs
//
LOCUS       XP_061012796             316 aa            linear   MAM 02-DEC-2023
DEFINITION  retinol dehydrogenase 12 [Dama dama].
ACCESSION   XP_061012796
VERSION     XP_061012796.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156813.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..316
                     /product="retinol dehydrogenase 12"
                     /calculated_mol_wt=35063
     Region          39..307
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(46,48..49,51,70..72,125..127,179..181,200,204,
                     230..233)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:212495"
     Site            order(147,181,200,204)
                     /site_type="active"
                     /db_xref="CDD:212495"
     CDS             1..316
                     /gene="RDH12"
                     /coded_by="XM_061156813.1:1304..2254"
                     /db_xref="GeneID:133066090"
ORIGIN      
        1 mlvalgllts flsflyvtap sirkffaggv crtnvqlsgk vvvitgantg igketarels
       61 rrgarvyiac rdvlkgesaa seiradtkns qvlvrkldls dtksirafae gflaeekqlh
      121 ilinnagvml cpysktadgf ethlgvnhlg hflltrllle rlkesaparv vtlssvvhha
      181 gkirfhdlqg ekyynrgfay chsklanvlf trelakrlkg tgvttyavhp givrselvrh
      241 sfllcllwrl fspflkttwe gaqtslhcal aegleplsgk yfsdckktwv sprarnnkta
      301 erlwnvscel lgiqwe
//
LOCUS       XP_061012797             316 aa            linear   MAM 02-DEC-2023
DEFINITION  retinol dehydrogenase 12 [Dama dama].
ACCESSION   XP_061012797
VERSION     XP_061012797.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156814.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..316
                     /product="retinol dehydrogenase 12"
                     /calculated_mol_wt=35063
     Region          39..307
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(46,48..49,51,70..72,125..127,179..181,200,204,
                     230..233)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:212495"
     Site            order(147,181,200,204)
                     /site_type="active"
                     /db_xref="CDD:212495"
     CDS             1..316
                     /gene="RDH12"
                     /coded_by="XM_061156814.1:660..1610"
                     /db_xref="GeneID:133066090"
ORIGIN      
        1 mlvalgllts flsflyvtap sirkffaggv crtnvqlsgk vvvitgantg igketarels
       61 rrgarvyiac rdvlkgesaa seiradtkns qvlvrkldls dtksirafae gflaeekqlh
      121 ilinnagvml cpysktadgf ethlgvnhlg hflltrllle rlkesaparv vtlssvvhha
      181 gkirfhdlqg ekyynrgfay chsklanvlf trelakrlkg tgvttyavhp givrselvrh
      241 sfllcllwrl fspflkttwe gaqtslhcal aegleplsgk yfsdckktwv sprarnnkta
      301 erlwnvscel lgiqwe
//
LOCUS       XP_061012798             322 aa            linear   MAM 02-DEC-2023
DEFINITION  retinol dehydrogenase 11 isoform X1 [Dama dama].
ACCESSION   XP_061012798
VERSION     XP_061012798.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156815.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..322
                     /product="retinol dehydrogenase 11 isoform X1"
                     /calculated_mol_wt=35748
     Region          43..313
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(50,52..53,55,74..76,129..131,183..185,204,208,
                     236..239)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:212495"
     Site            order(151,185,204,208)
                     /site_type="active"
                     /db_xref="CDD:212495"
     CDS             1..322
                     /gene="RDH11"
                     /coded_by="XM_061156815.1:76..1044"
                     /db_xref="GeneID:133066092"
ORIGIN      
        1 mlwvllllll lpfllyiaap qirsvqrkml ssgvctstvq lpgkvavvtg antgigketa
       61 kelaqrgarv ylacrdvqka elvareiqmm tgnqqvlvrk ldladtksir afakrfleee
      121 khlhilinna gvmmcpyskt adgfemhmgv nhlghfllth llleklkesa psrvvnvssl
      181 ahhlgrihfh nlqgekfyqs glaychskla nilftqelar rlkasgsgvt vysvhpgtvs
      241 selvrhsalm rwiwwifsfl ikspqqgaqt slycaltegl evlsgnhfsd chvawvsaqa
      301 rnetvarrlw dvscdllgip vd
//
LOCUS       XP_061012799             318 aa            linear   MAM 02-DEC-2023
DEFINITION  retinol dehydrogenase 11 isoform X2 [Dama dama].
ACCESSION   XP_061012799
VERSION     XP_061012799.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156816.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..318
                     /product="retinol dehydrogenase 11 isoform X2"
                     /calculated_mol_wt=35277
     Region          39..309
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(46,48..49,51,70..72,125..127,179..181,200,204,
                     232..235)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:212495"
     Site            order(147,181,200,204)
                     /site_type="active"
                     /db_xref="CDD:212495"
     CDS             1..318
                     /gene="RDH11"
                     /coded_by="XM_061156816.1:90..1046"
                     /db_xref="GeneID:133066092"
ORIGIN      
        1 mlwvllllll lpfllyiaap qirkmlssgv ctstvqlpgk vavvtgantg igketakela
       61 qrgarvylac rdvqkaelva reiqmmtgnq qvlvrkldla dtksirafak rfleeekhlh
      121 ilinnagvmm cpysktadgf emhmgvnhlg hfllthllle klkesapsrv vnvsslahhl
      181 grihfhnlqg ekfyqsglay chsklanilf tqelarrlka sgsgvtvysv hpgtvsselv
      241 rhsalmrwiw wifsfliksp qqgaqtslyc alteglevls gnhfsdchva wvsaqarnet
      301 varrlwdvsc dllgipvd
//
LOCUS       XP_061012800             354 aa            linear   MAM 02-DEC-2023
DEFINITION  arginase-2, mitochondrial [Dama dama].
ACCESSION   XP_061012800
VERSION     XP_061012800.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156817.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..354
                     /product="arginase-2, mitochondrial"
                     /calculated_mol_wt=38491
     Region          26..321
                     /region_name="Arginase"
                     /note="Arginase family; cd09989"
                     /db_xref="CDD:212515"
     Site            order(120,143,145,147,149,160..161,202,205,251,253,296)
                     /site_type="active"
                     /db_xref="CDD:212515"
     Site            order(199,201,206,209..210,218..220,222..225,228..229,232,
                     268..275,281)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:212515"
     CDS             1..354
                     /gene="ARG2"
                     /coded_by="XM_061156817.1:68..1132"
                     /db_xref="GeneID:133066093"
ORIGIN      
        1 mslrshlsrl lrtqvhsvrk ksvhsvavig apfsqgqkrk gveygpaavr eaglmkrlsd
       61 lgchlkdfgd lnftpvpkdd lynnlivnpr svglanqela evvsravagg yscvtvggdh
      121 slaigtisgh arhcpdlgvi wvdahadint plttssgnlh gqpvsfllre lqdkvpqlpg
      181 fswikpciss psivyiglrd vdppehfilk nydiqyfsmr didrlgiqkv meqtfdllig
      241 krqrpihlsf didafdptla patgtpvvgg ltyregmyit eeihstglls aldlvevnpr
      301 lavseeeaka taslavdvia ssfgqtregg hvvydqlptp sspdesesee rvri
//
LOCUS       XP_061012802             232 aa            linear   MAM 02-DEC-2023
DEFINITION  vesicle transport through interaction with t-SNAREs homolog 1B
            isoform X1 [Dama dama].
ACCESSION   XP_061012802
VERSION     XP_061012802.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156819.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..232
                     /product="vesicle transport through interaction with
                     t-SNAREs homolog 1B isoform X1"
                     /calculated_mol_wt=26637
     Region          18..96
                     /region_name="V-SNARE"
                     /note="Vesicle transport v-SNARE protein N-terminus;
                     pfam05008"
                     /db_xref="CDD:461516"
     Region          136..197
                     /region_name="SNARE_Vti1b"
                     /note="SNARE motif of Vti1b-like; cd15890"
                     /db_xref="CDD:277243"
     Site            order(141..142,145..146,148..150,152..157,159..161,
                     163..164,166..167,170..171,173..178,180..182,184..185,
                     187..192,194..195)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277243"
     Site            170
                     /site_type="active"
                     /note="zero layer [active]"
                     /db_xref="CDD:277243"
     CDS             1..232
                     /gene="VTI1B"
                     /coded_by="XM_061156819.1:177..875"
                     /db_xref="GeneID:133066094"
ORIGIN      
        1 maasaasseh feklheifrg lhedlrgvpe rllgmagtee kkklirdfde kqqeanetla
       61 emeeelryap lsfrnpmmsk lrtyrkdlak lhrevrstpl tatpgargdv rygtytvene
      121 hmnrlqsqrt lllqgtdsln ratqsiersh riaaetdqig seiieelgeq rdqlertksr
      181 lvntsenlsk srkilrsmsr kvttnkllls ivillelail gglvyykffr rh
//
LOCUS       XP_061012803             224 aa            linear   MAM 02-DEC-2023
DEFINITION  vesicle transport through interaction with t-SNAREs homolog 1B
            isoform X2 [Dama dama].
ACCESSION   XP_061012803
VERSION     XP_061012803.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156820.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..224
                     /product="vesicle transport through interaction with
                     t-SNAREs homolog 1B isoform X2"
                     /calculated_mol_wt=25266
     Region          18..96
                     /region_name="V-SNARE"
                     /note="Vesicle transport v-SNARE protein N-terminus;
                     pfam05008"
                     /db_xref="CDD:461516"
     Region          136..>180
                     /region_name="SNARE_Vti1b"
                     /note="SNARE motif of Vti1b-like; cd15890"
                     /db_xref="CDD:277243"
     Site            170
                     /site_type="active"
                     /note="zero layer [active]"
                     /db_xref="CDD:277243"
     CDS             1..224
                     /gene="VTI1B"
                     /coded_by="XM_061156820.1:222..896"
                     /db_xref="GeneID:133066094"
ORIGIN      
        1 maasaasseh feklheifrg lhedlrgvpe rllgmagtee kkklirdfde kqqeanetla
       61 emeeelryap lsfrnpmmsk lrtyrkdlak lhrevrstpl tatpgargdv rygtytvene
      121 hmnrlqsqrt lllqgtdsln ratqsiersh riaaetdqig seiieelgeq rdqlertksr
      181 sdnqqaaafh rhltgashsg rpgllqilsq alnllqgrvc gpel
//
LOCUS       XP_061012804             186 aa            linear   MAM 02-DEC-2023
DEFINITION  vesicle transport through interaction with t-SNAREs homolog 1B
            isoform X3 [Dama dama].
ACCESSION   XP_061012804
VERSION     XP_061012804.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156821.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..186
                     /product="vesicle transport through interaction with
                     t-SNAREs homolog 1B isoform X3"
                     /calculated_mol_wt=21350
     Region          18..96
                     /region_name="V-SNARE"
                     /note="Vesicle transport v-SNARE protein N-terminus;
                     pfam05008"
                     /db_xref="CDD:461516"
     Region          136..>181
                     /region_name="SNARE_Vti1b"
                     /note="SNARE motif of Vti1b-like; cd15890"
                     /db_xref="CDD:277243"
     Site            170
                     /site_type="active"
                     /note="zero layer [active]"
                     /db_xref="CDD:277243"
     CDS             1..186
                     /gene="VTI1B"
                     /coded_by="XM_061156821.1:193..753"
                     /db_xref="GeneID:133066094"
ORIGIN      
        1 maasaasseh feklheifrg lhedlrgvpe rllgmagtee kkklirdfde kqqeanetla
       61 emeeelryap lsfrnpmmsk lrtyrkdlak lhrevrstpl tatpgargdv rygtytvene
      121 hmnrlqsqrt lllqgtdsln ratqsiersh riaaetdqig seiieelgeq rdqlertksr
      181 lrmskl
//
LOCUS       XP_061012805            1342 aa            linear   MAM 02-DEC-2023
DEFINITION  pleckstrin homology domain-containing family H member 1 isoform X1
            [Dama dama].
ACCESSION   XP_061012805
VERSION     XP_061012805.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156822.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1342
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1342
                     /product="pleckstrin homology domain-containing family H
                     member 1 isoform X1"
                     /calculated_mol_wt=148380
     Region          15..293
                     /region_name="CwlO1"
                     /note="Uncharacterized N-terminal coiled-coil domain of
                     peptidoglycan hydrolase CwlO [Function unknown]; COG3883"
                     /db_xref="CDD:443091"
     Region          576..670
                     /region_name="PH1_PLEKHH1_PLEKHH2"
                     /note="Pleckstrin homology (PH) domain containing, family
                     H (with MyTH4 domain) members 1 and 2 (PLEKHH1) PH domain,
                     repeat 1; cd13282"
                     /db_xref="CDD:241436"
     Region          683..786
                     /region_name="PH"
                     /note="Pleckstrin homology domain; smart00233"
                     /db_xref="CDD:214574"
     Region          827..981
                     /region_name="MyTH4"
                     /note="Domain in Myosin and Kinesin Tails; smart00139"
                     /db_xref="CDD:214535"
     Region          991..1097
                     /region_name="Ubl1_cv_Nsp3_N-like"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; cl28922"
                     /db_xref="CDD:475130"
     Region          994..1225
                     /region_name="B41"
                     /note="Band 4.1 homologues; smart00295"
                     /db_xref="CDD:214604"
     Region          1221..1322
                     /region_name="FERM_C-lobe_PLEKHH1_PLEKHH2"
                     /note="FERM domain C-lobe of Pleckstrin homology
                     domain-containing family H; cd13206"
                     /db_xref="CDD:241360"
     Site            order(1229,1251,1253,1261)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:241360"
     Site            order(1265,1270..1273,1311,1315,1318..1319,1322)
                     /site_type="other"
                     /note="TSLC1 peptide binding site [polypeptide binding]"
                     /db_xref="CDD:241360"
     Site            1311..1322
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:241360"
     CDS             1..1342
                     /gene="PLEKHH1"
                     /coded_by="XM_061156822.1:179..4207"
                     /db_xref="GeneID:133066096"
ORIGIN      
        1 maeltvetrt svdwqkryla letqlfrfrl qaskirella dkmqeleqrl leaeqraena
       61 etqvgvmeek vklsnlmngd sagslhrkyq ellkamqgkd eliseleaql ekqkqmraee
      121 akivqekaak ikewvtlklt elemenqhlk scnqhlveqv galqhaleal qmapsgkllv
      181 apqgttewes vpsgpgaqpa gqdsgppaqg alnaaipaps pgalqskdsv pkagspvqds
      241 ssqtvhpgat seaktlplhl grqgspgqlc lrprtprhgl tswgeglvta qggtlprtkt
      301 sakeggpgcs ltlpkaraps alwdsiqlak rhhsqpqagp ghfshvvrie mgtlsafhpl
      361 glpkeavrvk preepekmem eeqppagkke apgaelkevd lenkpppppl hrfpswesri
      421 yavatsgmrl sevsvrsnvt ccassppala spgpfsglvy knvtvpvyta lkgkatqiss
      481 vpfvdessgs dddcssqasf rislpcsesr ktsglgspra ikrgvsmssl ssegdyaipp
      541 daysldsdys epehklqrts systdglgpg gesleksgyl lkmgsqvktw krrwfvlrqg
      601 qlmyykspsd virkpqgqve lnsrcqivrg egaqtfqlis ekktyyltad spslleewir
      661 vlqsllkvqa igppappqgg skptvkgwlt kvkhghsklv wcalvgrtfy yyrshedkrp
      721 lgrlpvrdar ieevdrscds dedyeaggtr rllsshytlv ihppehspty lligtkhekd
      781 twlyhltvaa ggssakvgta yeqligklmd gegdpdsplw rhpmlcyttd glytslttlp
      841 sealqteavk lfkscqlfin vpveaasvdy hvslaqtalq vclthpelqs eiycqlvkqa
      901 scrppqkssl mqcwqllalc aplflpqhhf lwyvkqqlqr hadprnetgq yatycqrave
      961 rtlqtgerea rpsrmevvsi llrnpfhhsl pfsipvhfan gtyqvvgfdg sstvdeflqr
     1021 lnqetgmrka shsgfalftd dpagrdlehc lqgsvkicda iskweqalke lhagkseggt
     1081 rvvklmyknr lyfrsqvkge tererlllas qtnreivagr fpvnkelale maalmaqvey
     1141 gdlertilpg pggtlsakaq hhlqqvldrf yprryrhgap aeqlrlladq lttkwaalhg
     1201 csspeciriy lavarkwplf gaklfaaqpa qlsskeralv wiavnedgvs ildhntmqvh
     1261 vtypyswvtt fggcrddfml virsfpdqss gkghveklif rmaapkiaem tfilasymnh
     1321 csttvnpptt ptaacqpwel hg
//
LOCUS       XP_061012806            1342 aa            linear   MAM 02-DEC-2023
DEFINITION  pleckstrin homology domain-containing family H member 1 isoform X1
            [Dama dama].
ACCESSION   XP_061012806
VERSION     XP_061012806.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156823.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1342
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1342
                     /product="pleckstrin homology domain-containing family H
                     member 1 isoform X1"
                     /calculated_mol_wt=148380
     Region          15..293
                     /region_name="CwlO1"
                     /note="Uncharacterized N-terminal coiled-coil domain of
                     peptidoglycan hydrolase CwlO [Function unknown]; COG3883"
                     /db_xref="CDD:443091"
     Region          576..670
                     /region_name="PH1_PLEKHH1_PLEKHH2"
                     /note="Pleckstrin homology (PH) domain containing, family
                     H (with MyTH4 domain) members 1 and 2 (PLEKHH1) PH domain,
                     repeat 1; cd13282"
                     /db_xref="CDD:241436"
     Region          683..786
                     /region_name="PH"
                     /note="Pleckstrin homology domain; smart00233"
                     /db_xref="CDD:214574"
     Region          827..981
                     /region_name="MyTH4"
                     /note="Domain in Myosin and Kinesin Tails; smart00139"
                     /db_xref="CDD:214535"
     Region          991..1097
                     /region_name="Ubl1_cv_Nsp3_N-like"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; cl28922"
                     /db_xref="CDD:475130"
     Region          994..1225
                     /region_name="B41"
                     /note="Band 4.1 homologues; smart00295"
                     /db_xref="CDD:214604"
     Region          1221..1322
                     /region_name="FERM_C-lobe_PLEKHH1_PLEKHH2"
                     /note="FERM domain C-lobe of Pleckstrin homology
                     domain-containing family H; cd13206"
                     /db_xref="CDD:241360"
     Site            order(1229,1251,1253,1261)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:241360"
     Site            order(1265,1270..1273,1311,1315,1318..1319,1322)
                     /site_type="other"
                     /note="TSLC1 peptide binding site [polypeptide binding]"
                     /db_xref="CDD:241360"
     Site            1311..1322
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:241360"
     CDS             1..1342
                     /gene="PLEKHH1"
                     /coded_by="XM_061156823.1:128..4156"
                     /db_xref="GeneID:133066096"
ORIGIN      
        1 maeltvetrt svdwqkryla letqlfrfrl qaskirella dkmqeleqrl leaeqraena
       61 etqvgvmeek vklsnlmngd sagslhrkyq ellkamqgkd eliseleaql ekqkqmraee
      121 akivqekaak ikewvtlklt elemenqhlk scnqhlveqv galqhaleal qmapsgkllv
      181 apqgttewes vpsgpgaqpa gqdsgppaqg alnaaipaps pgalqskdsv pkagspvqds
      241 ssqtvhpgat seaktlplhl grqgspgqlc lrprtprhgl tswgeglvta qggtlprtkt
      301 sakeggpgcs ltlpkaraps alwdsiqlak rhhsqpqagp ghfshvvrie mgtlsafhpl
      361 glpkeavrvk preepekmem eeqppagkke apgaelkevd lenkpppppl hrfpswesri
      421 yavatsgmrl sevsvrsnvt ccassppala spgpfsglvy knvtvpvyta lkgkatqiss
      481 vpfvdessgs dddcssqasf rislpcsesr ktsglgspra ikrgvsmssl ssegdyaipp
      541 daysldsdys epehklqrts systdglgpg gesleksgyl lkmgsqvktw krrwfvlrqg
      601 qlmyykspsd virkpqgqve lnsrcqivrg egaqtfqlis ekktyyltad spslleewir
      661 vlqsllkvqa igppappqgg skptvkgwlt kvkhghsklv wcalvgrtfy yyrshedkrp
      721 lgrlpvrdar ieevdrscds dedyeaggtr rllsshytlv ihppehspty lligtkhekd
      781 twlyhltvaa ggssakvgta yeqligklmd gegdpdsplw rhpmlcyttd glytslttlp
      841 sealqteavk lfkscqlfin vpveaasvdy hvslaqtalq vclthpelqs eiycqlvkqa
      901 scrppqkssl mqcwqllalc aplflpqhhf lwyvkqqlqr hadprnetgq yatycqrave
      961 rtlqtgerea rpsrmevvsi llrnpfhhsl pfsipvhfan gtyqvvgfdg sstvdeflqr
     1021 lnqetgmrka shsgfalftd dpagrdlehc lqgsvkicda iskweqalke lhagkseggt
     1081 rvvklmyknr lyfrsqvkge tererlllas qtnreivagr fpvnkelale maalmaqvey
     1141 gdlertilpg pggtlsakaq hhlqqvldrf yprryrhgap aeqlrlladq lttkwaalhg
     1201 csspeciriy lavarkwplf gaklfaaqpa qlsskeralv wiavnedgvs ildhntmqvh
     1261 vtypyswvtt fggcrddfml virsfpdqss gkghveklif rmaapkiaem tfilasymnh
     1321 csttvnpptt ptaacqpwel hg
//
LOCUS       XP_061012807            1289 aa            linear   MAM 02-DEC-2023
DEFINITION  pleckstrin homology domain-containing family H member 1 isoform X2
            [Dama dama].
ACCESSION   XP_061012807
VERSION     XP_061012807.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156824.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1289
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1289
                     /product="pleckstrin homology domain-containing family H
                     member 1 isoform X2"
                     /calculated_mol_wt=143323
     Region          16..>176
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          523..617
                     /region_name="PH1_PLEKHH1_PLEKHH2"
                     /note="Pleckstrin homology (PH) domain containing, family
                     H (with MyTH4 domain) members 1 and 2 (PLEKHH1) PH domain,
                     repeat 1; cd13282"
                     /db_xref="CDD:241436"
     Region          630..733
                     /region_name="PH"
                     /note="Pleckstrin homology domain; smart00233"
                     /db_xref="CDD:214574"
     Region          774..928
                     /region_name="MyTH4"
                     /note="Domain in Myosin and Kinesin Tails; smart00139"
                     /db_xref="CDD:214535"
     Region          938..1044
                     /region_name="Ubl1_cv_Nsp3_N-like"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; cl28922"
                     /db_xref="CDD:475130"
     Region          941..1172
                     /region_name="B41"
                     /note="Band 4.1 homologues; smart00295"
                     /db_xref="CDD:214604"
     Region          1168..1269
                     /region_name="FERM_C-lobe_PLEKHH1_PLEKHH2"
                     /note="FERM domain C-lobe of Pleckstrin homology
                     domain-containing family H; cd13206"
                     /db_xref="CDD:241360"
     Site            order(1176,1198,1200,1208)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:241360"
     Site            order(1212,1217..1220,1258,1262,1265..1266,1269)
                     /site_type="other"
                     /note="TSLC1 peptide binding site [polypeptide binding]"
                     /db_xref="CDD:241360"
     Site            1258..1269
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:241360"
     CDS             1..1289
                     /gene="PLEKHH1"
                     /coded_by="XM_061156824.1:162..4031"
                     /db_xref="GeneID:133066096"
ORIGIN      
        1 maeltvetrt svdwqkryla letqlfrfrl qaskirella dkmqeleqrl leaeqraena
       61 etqvgvmeek vklsnlmngd sagslhrkyq ellkamqgkd eliseleaql ekqkqmraee
      121 akivqekaak ikewvtlklt elemenqhlk scnqhlveqv galqhalega lqskdsvpka
      181 gspvqdsssq tvhpgatsea ktlplhlgrq gspgqlclrp rtprhgltsw geglvtaqgg
      241 tlprtktsak eggpgcsltl pkarapsalw dsiqlakrhh sqpqagpghf shvvriemgt
      301 lsafhplglp keavrvkpre epekmemeeq ppagkkeapg aelkevdlen kppppplhrf
      361 pswesriyav atsgmrlsev svrsnvtcca ssppalaspg pfsglvyknv tvpvytalkg
      421 katqissvpf vdessgsddd cssqasfris lpcsesrkts glgspraikr gvsmsslsse
      481 gdyaippday sldsdysepe hklqrtssys tdglgpgges leksgyllkm gsqvktwkrr
      541 wfvlrqgqlm yykspsdvir kpqgqvelns rcqivrgega qtfqlisekk tyyltadsps
      601 lleewirvlq sllkvqaigp pappqggskp tvkgwltkvk hghsklvwca lvgrtfyyyr
      661 shedkrplgr lpvrdariee vdrscdsded yeaggtrrll sshytlvihp pehsptylli
      721 gtkhekdtwl yhltvaaggs sakvgtayeq ligklmdgeg dpdsplwrhp mlcyttdgly
      781 tslttlpsea lqteavklfk scqlfinvpv eaasvdyhvs laqtalqvcl thpelqseiy
      841 cqlvkqascr ppqksslmqc wqllalcapl flpqhhflwy vkqqlqrhad prnetgqyat
      901 ycqravertl qtgerearps rmevvsillr npfhhslpfs ipvhfangty qvvgfdgsst
      961 vdeflqrlnq etgmrkashs gfalftddpa grdlehclqg svkicdaisk weqalkelha
     1021 gkseggtrvv klmyknrlyf rsqvkgeter erlllasqtn reivagrfpv nkelalemaa
     1081 lmaqveygdl ertilpgpgg tlsakaqhhl qqvldrfypr ryrhgapaeq lrlladqltt
     1141 kwaalhgcss peciriylav arkwplfgak lfaaqpaqls skeralvwia vnedgvsild
     1201 hntmqvhvty pyswvttfgg crddfmlvir sfpdqssgkg hveklifrma apkiaemtfi
     1261 lasymnhcst tvnppttpta acqpwelhg
//
LOCUS       XP_061012808            1342 aa            linear   MAM 02-DEC-2023
DEFINITION  pleckstrin homology domain-containing family H member 1 isoform X1
            [Dama dama].
ACCESSION   XP_061012808
VERSION     XP_061012808.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156825.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1342
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1342
                     /product="pleckstrin homology domain-containing family H
                     member 1 isoform X1"
                     /calculated_mol_wt=148380
     Region          15..293
                     /region_name="CwlO1"
                     /note="Uncharacterized N-terminal coiled-coil domain of
                     peptidoglycan hydrolase CwlO [Function unknown]; COG3883"
                     /db_xref="CDD:443091"
     Region          576..670
                     /region_name="PH1_PLEKHH1_PLEKHH2"
                     /note="Pleckstrin homology (PH) domain containing, family
                     H (with MyTH4 domain) members 1 and 2 (PLEKHH1) PH domain,
                     repeat 1; cd13282"
                     /db_xref="CDD:241436"
     Region          683..786
                     /region_name="PH"
                     /note="Pleckstrin homology domain; smart00233"
                     /db_xref="CDD:214574"
     Region          827..981
                     /region_name="MyTH4"
                     /note="Domain in Myosin and Kinesin Tails; smart00139"
                     /db_xref="CDD:214535"
     Region          991..1097
                     /region_name="Ubl1_cv_Nsp3_N-like"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; cl28922"
                     /db_xref="CDD:475130"
     Region          994..1225
                     /region_name="B41"
                     /note="Band 4.1 homologues; smart00295"
                     /db_xref="CDD:214604"
     Region          1221..1322
                     /region_name="FERM_C-lobe_PLEKHH1_PLEKHH2"
                     /note="FERM domain C-lobe of Pleckstrin homology
                     domain-containing family H; cd13206"
                     /db_xref="CDD:241360"
     Site            order(1229,1251,1253,1261)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:241360"
     Site            order(1265,1270..1273,1311,1315,1318..1319,1322)
                     /site_type="other"
                     /note="TSLC1 peptide binding site [polypeptide binding]"
                     /db_xref="CDD:241360"
     Site            1311..1322
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:241360"
     CDS             1..1342
                     /gene="PLEKHH1"
                     /coded_by="XM_061156825.1:185..4213"
                     /db_xref="GeneID:133066096"
ORIGIN      
        1 maeltvetrt svdwqkryla letqlfrfrl qaskirella dkmqeleqrl leaeqraena
       61 etqvgvmeek vklsnlmngd sagslhrkyq ellkamqgkd eliseleaql ekqkqmraee
      121 akivqekaak ikewvtlklt elemenqhlk scnqhlveqv galqhaleal qmapsgkllv
      181 apqgttewes vpsgpgaqpa gqdsgppaqg alnaaipaps pgalqskdsv pkagspvqds
      241 ssqtvhpgat seaktlplhl grqgspgqlc lrprtprhgl tswgeglvta qggtlprtkt
      301 sakeggpgcs ltlpkaraps alwdsiqlak rhhsqpqagp ghfshvvrie mgtlsafhpl
      361 glpkeavrvk preepekmem eeqppagkke apgaelkevd lenkpppppl hrfpswesri
      421 yavatsgmrl sevsvrsnvt ccassppala spgpfsglvy knvtvpvyta lkgkatqiss
      481 vpfvdessgs dddcssqasf rislpcsesr ktsglgspra ikrgvsmssl ssegdyaipp
      541 daysldsdys epehklqrts systdglgpg gesleksgyl lkmgsqvktw krrwfvlrqg
      601 qlmyykspsd virkpqgqve lnsrcqivrg egaqtfqlis ekktyyltad spslleewir
      661 vlqsllkvqa igppappqgg skptvkgwlt kvkhghsklv wcalvgrtfy yyrshedkrp
      721 lgrlpvrdar ieevdrscds dedyeaggtr rllsshytlv ihppehspty lligtkhekd
      781 twlyhltvaa ggssakvgta yeqligklmd gegdpdsplw rhpmlcyttd glytslttlp
      841 sealqteavk lfkscqlfin vpveaasvdy hvslaqtalq vclthpelqs eiycqlvkqa
      901 scrppqkssl mqcwqllalc aplflpqhhf lwyvkqqlqr hadprnetgq yatycqrave
      961 rtlqtgerea rpsrmevvsi llrnpfhhsl pfsipvhfan gtyqvvgfdg sstvdeflqr
     1021 lnqetgmrka shsgfalftd dpagrdlehc lqgsvkicda iskweqalke lhagkseggt
     1081 rvvklmyknr lyfrsqvkge tererlllas qtnreivagr fpvnkelale maalmaqvey
     1141 gdlertilpg pggtlsakaq hhlqqvldrf yprryrhgap aeqlrlladq lttkwaalhg
     1201 csspeciriy lavarkwplf gaklfaaqpa qlsskeralv wiavnedgvs ildhntmqvh
     1261 vtypyswvtt fggcrddfml virsfpdqss gkghveklif rmaapkiaem tfilasymnh
     1321 csttvnpptt ptaacqpwel hg
//
LOCUS       XP_061012809             198 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphatidylinositol N-acetylglucosaminyltransferase subunit H
            isoform X1 [Dama dama].
ACCESSION   XP_061012809
VERSION     XP_061012809.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156826.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..198
                     /product="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit H isoform X1"
                     /calculated_mol_wt=21805
     Region          99..168
                     /region_name="PIG-H"
                     /note="GPI-GlcNAc transferase complex, PIG-H component;
                     pfam10181"
                     /db_xref="CDD:462983"
     CDS             1..198
                     /gene="PIGH"
                     /coded_by="XM_061156826.1:68..664"
                     /db_xref="GeneID:133066099"
ORIGIN      
        1 magpgagepa medersfsdi cggrlalhrr yyspsclefc lscprislrs ltavtctvwl
       61 aayglftlce nsmilsaaif itllgllgyl hfvkidhetl liidslgiqm tssyasgkes
      121 ttfiemgkvk dviineaiym qkviyylcil lkdpvephgi sqvvplfqsa kprldcliev
      181 yrscqeilah qkatstnp
//
LOCUS       XP_061012810             197 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphatidylinositol N-acetylglucosaminyltransferase subunit H
            isoform X2 [Dama dama].
ACCESSION   XP_061012810
VERSION     XP_061012810.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156827.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..197
                     /product="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit H isoform X2"
                     /calculated_mol_wt=21676
     Region          99..167
                     /region_name="PIG-H"
                     /note="GPI-GlcNAc transferase complex, PIG-H component;
                     pfam10181"
                     /db_xref="CDD:462983"
     CDS             1..197
                     /gene="PIGH"
                     /coded_by="XM_061156827.1:69..662"
                     /db_xref="GeneID:133066099"
ORIGIN      
        1 magpgagepa medersfsdi cggrlalhrr yyspsclefc lscprislrs ltavtctvwl
       61 aayglftlce nsmilsaaif itllgllgyl hfvkidhetl liidslgiqm tssyasgkes
      121 ttfiemgkvk dviineaiym kviyylcill kdpvephgis qvvplfqsak prldclievy
      181 rscqeilahq katstnp
//
LOCUS       XP_061012811             167 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 229B [Dama dama].
ACCESSION   XP_061012811
VERSION     XP_061012811.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156828.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..167
                     /product="transmembrane protein 229B"
                     /calculated_mol_wt=19388
     Region          <50..>135
                     /region_name="ABC_trans_CmpB"
                     /note="Putative ABC-transporter type IV; cl46401"
                     /db_xref="CDD:480741"
     CDS             1..167
                     /gene="TMEM229B"
                     /coded_by="XM_061156828.1:549..1052"
                     /db_xref="GeneID:133066100"
ORIGIN      
        1 masaepltal srwylyaihg yfcevmftaa wefvvnfnwk fpgvtsvwal fiygtsiliv
       61 ermylrlrgr cpllvrcliy tlwtylweft tgfilrqfna cpwdysqfdf dfmglitley
      121 avpwfcgali veqfiirntl rlrfdkdaep gepsgalala nghvktd
//
LOCUS       XP_061012813             167 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 229B [Dama dama].
ACCESSION   XP_061012813
VERSION     XP_061012813.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156830.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..167
                     /product="transmembrane protein 229B"
                     /calculated_mol_wt=19388
     Region          <50..>135
                     /region_name="ABC_trans_CmpB"
                     /note="Putative ABC-transporter type IV; cl46401"
                     /db_xref="CDD:480741"
     CDS             1..167
                     /gene="TMEM229B"
                     /coded_by="XM_061156830.1:509..1012"
                     /db_xref="GeneID:133066100"
ORIGIN      
        1 masaepltal srwylyaihg yfcevmftaa wefvvnfnwk fpgvtsvwal fiygtsiliv
       61 ermylrlrgr cpllvrcliy tlwtylweft tgfilrqfna cpwdysqfdf dfmglitley
      121 avpwfcgali veqfiirntl rlrfdkdaep gepsgalala nghvktd
//
LOCUS       XP_061012814             167 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 229B [Dama dama].
ACCESSION   XP_061012814
VERSION     XP_061012814.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156831.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..167
                     /product="transmembrane protein 229B"
                     /calculated_mol_wt=19388
     Region          <50..>135
                     /region_name="ABC_trans_CmpB"
                     /note="Putative ABC-transporter type IV; cl46401"
                     /db_xref="CDD:480741"
     CDS             1..167
                     /gene="TMEM229B"
                     /coded_by="XM_061156831.1:545..1048"
                     /db_xref="GeneID:133066100"
ORIGIN      
        1 masaepltal srwylyaihg yfcevmftaa wefvvnfnwk fpgvtsvwal fiygtsiliv
       61 ermylrlrgr cpllvrcliy tlwtylweft tgfilrqfna cpwdysqfdf dfmglitley
      121 avpwfcgali veqfiirntl rlrfdkdaep gepsgalala nghvktd
//
LOCUS       XP_061012815             167 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 229B [Dama dama].
ACCESSION   XP_061012815
VERSION     XP_061012815.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156832.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..167
                     /product="transmembrane protein 229B"
                     /calculated_mol_wt=19388
     Region          <50..>135
                     /region_name="ABC_trans_CmpB"
                     /note="Putative ABC-transporter type IV; cl46401"
                     /db_xref="CDD:480741"
     CDS             1..167
                     /gene="TMEM229B"
                     /coded_by="XM_061156832.1:587..1090"
                     /db_xref="GeneID:133066100"
ORIGIN      
        1 masaepltal srwylyaihg yfcevmftaa wefvvnfnwk fpgvtsvwal fiygtsiliv
       61 ermylrlrgr cpllvrcliy tlwtylweft tgfilrqfna cpwdysqfdf dfmglitley
      121 avpwfcgali veqfiirntl rlrfdkdaep gepsgalala nghvktd
//
LOCUS       XP_061012816             167 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 229B [Dama dama].
ACCESSION   XP_061012816
VERSION     XP_061012816.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156833.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..167
                     /product="transmembrane protein 229B"
                     /calculated_mol_wt=19388
     Region          <50..>135
                     /region_name="ABC_trans_CmpB"
                     /note="Putative ABC-transporter type IV; cl46401"
                     /db_xref="CDD:480741"
     CDS             1..167
                     /gene="TMEM229B"
                     /coded_by="XM_061156833.1:552..1055"
                     /db_xref="GeneID:133066100"
ORIGIN      
        1 masaepltal srwylyaihg yfcevmftaa wefvvnfnwk fpgvtsvwal fiygtsiliv
       61 ermylrlrgr cpllvrcliy tlwtylweft tgfilrqfna cpwdysqfdf dfmglitley
      121 avpwfcgali veqfiirntl rlrfdkdaep gepsgalala nghvktd
//
LOCUS       XP_061012817             167 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 229B [Dama dama].
ACCESSION   XP_061012817
VERSION     XP_061012817.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156834.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..167
                     /product="transmembrane protein 229B"
                     /calculated_mol_wt=19388
     Region          <50..>135
                     /region_name="ABC_trans_CmpB"
                     /note="Putative ABC-transporter type IV; cl46401"
                     /db_xref="CDD:480741"
     CDS             1..167
                     /gene="TMEM229B"
                     /coded_by="XM_061156834.1:761..1264"
                     /db_xref="GeneID:133066100"
ORIGIN      
        1 masaepltal srwylyaihg yfcevmftaa wefvvnfnwk fpgvtsvwal fiygtsiliv
       61 ermylrlrgr cpllvrcliy tlwtylweft tgfilrqfna cpwdysqfdf dfmglitley
      121 avpwfcgali veqfiirntl rlrfdkdaep gepsgalala nghvktd
//
LOCUS       XP_061012818             167 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 229B [Dama dama].
ACCESSION   XP_061012818
VERSION     XP_061012818.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156835.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..167
                     /product="transmembrane protein 229B"
                     /calculated_mol_wt=19388
     Region          <50..>135
                     /region_name="ABC_trans_CmpB"
                     /note="Putative ABC-transporter type IV; cl46401"
                     /db_xref="CDD:480741"
     CDS             1..167
                     /gene="TMEM229B"
                     /coded_by="XM_061156835.1:363..866"
                     /db_xref="GeneID:133066100"
ORIGIN      
        1 masaepltal srwylyaihg yfcevmftaa wefvvnfnwk fpgvtsvwal fiygtsiliv
       61 ermylrlrgr cpllvrcliy tlwtylweft tgfilrqfna cpwdysqfdf dfmglitley
      121 avpwfcgali veqfiirntl rlrfdkdaep gepsgalala nghvktd
//
LOCUS       XP_061012819             167 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 229B [Dama dama].
ACCESSION   XP_061012819
VERSION     XP_061012819.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156836.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..167
                     /product="transmembrane protein 229B"
                     /calculated_mol_wt=19388
     Region          <50..>135
                     /region_name="ABC_trans_CmpB"
                     /note="Putative ABC-transporter type IV; cl46401"
                     /db_xref="CDD:480741"
     CDS             1..167
                     /gene="TMEM229B"
                     /coded_by="XM_061156836.1:457..960"
                     /db_xref="GeneID:133066100"
ORIGIN      
        1 masaepltal srwylyaihg yfcevmftaa wefvvnfnwk fpgvtsvwal fiygtsiliv
       61 ermylrlrgr cpllvrcliy tlwtylweft tgfilrqfna cpwdysqfdf dfmglitley
      121 avpwfcgali veqfiirntl rlrfdkdaep gepsgalala nghvktd
//
LOCUS       XP_061012820             167 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 229B [Dama dama].
ACCESSION   XP_061012820
VERSION     XP_061012820.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156837.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..167
                     /product="transmembrane protein 229B"
                     /calculated_mol_wt=19388
     Region          <50..>135
                     /region_name="ABC_trans_CmpB"
                     /note="Putative ABC-transporter type IV; cl46401"
                     /db_xref="CDD:480741"
     CDS             1..167
                     /gene="TMEM229B"
                     /coded_by="XM_061156837.1:411..914"
                     /db_xref="GeneID:133066100"
ORIGIN      
        1 masaepltal srwylyaihg yfcevmftaa wefvvnfnwk fpgvtsvwal fiygtsiliv
       61 ermylrlrgr cpllvrcliy tlwtylweft tgfilrqfna cpwdysqfdf dfmglitley
      121 avpwfcgali veqfiirntl rlrfdkdaep gepsgalala nghvktd
//
LOCUS       XP_061012821             675 aa            linear   MAM 02-DEC-2023
DEFINITION  protein PALS1 isoform X1 [Dama dama].
ACCESSION   XP_061012821
VERSION     XP_061012821.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156838.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..675
                     /product="protein PALS1 isoform X1"
                     /calculated_mol_wt=76985
     Region          123..170
                     /region_name="L27_N"
                     /note="pfam09060"
                     /db_xref="CDD:462666"
     Region          189..238
                     /region_name="L27"
                     /note="domain in receptor targeting proteins Lin-2 and
                     Lin-7; smart00569"
                     /db_xref="CDD:197794"
     Region          255..334
                     /region_name="PDZ_MPP5-like"
                     /note="PDZ domain of membrane palmitoylated protein 5
                     (MPP5), Drosophila Stardust, and related domains; cd06798"
                     /db_xref="CDD:467259"
     Site            order(266..272,281,284,314,318,321..322)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467259"
     Region          349..411
                     /region_name="SH3_MPP5"
                     /note="Src Homology 3 domain of Membrane Protein,
                     Palmitoylated 5 (or MAGUK p55 subfamily member 5);
                     cd12036"
                     /db_xref="CDD:212969"
     Site            order(351,375..376)
                     /site_type="other"
                     /note="GuK domain interface [polypeptide binding]"
                     /db_xref="CDD:212969"
     Site            order(354,356,359,370,388..389,408,410..411)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212969"
     Site            order(486,492,509,516,519,528,551,556)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:238026"
     Site            order(486,492)
                     /site_type="other"
                     /note="G-X2-G-X-G-K"
                     /db_xref="CDD:238026"
     Region          491..661
                     /region_name="GuKc"
                     /note="Guanylate kinase homologues; smart00072"
                     /db_xref="CDD:214504"
     CDS             1..675
                     /gene="PALS1"
                     /coded_by="XM_061156838.1:398..2425"
                     /db_xref="GeneID:133066104"
ORIGIN      
        1 mttshmnghv teesdngikn vdlaspeehq khremavdcp gdlgtrmmpv rrsaqlerir
       61 qqqedmrrrr eeegkkqeld lnssmrlkkl aqippktgid npifdteegi vlesphyavk
      121 ilevedlfss lkhiqhtlvd sqsqedisll lqlvqnkdfq nafkihnavt vhmnkasppf
      181 plisnaqdla qevqtvlkpv pqkegqelta llnaphiqal llahdkvaeq emqlepiade
      241 rvyesvgqyg getvkivrie kardiplgat vrnemdsvii srivkggaae ksgllhegde
      301 vleingieir gkdvnevfdl lsdmhgtltf vlipsqqikp ppaketvihv kahfdydpsd
      361 dpyvpcrelg lsfqkgdilh visqedpnww qayregdedn qplaglvpgk sfqqqreamk
      421 qtieedkepe ksgklwcakk nkkkrkkvly nanknddydn eeiltyeems lyhqpanrkr
      481 piiligpqnc gqnelrqrlm nkekdrfasa vphttrnrrd hevagrdyhf vsrqafeadi
      541 aagkfiehge feknlygtsi dsvrqvinsg kicllslrtq slktlrnsdl kpyiifiapp
      601 sqerlralla kegknpkpee lreiiektre meqnnghyfd taivnsdldk ayqellrlin
      661 kldtepqwvp stwlr
//
LOCUS       XP_061012822             675 aa            linear   MAM 02-DEC-2023
DEFINITION  protein PALS1 isoform X1 [Dama dama].
ACCESSION   XP_061012822
VERSION     XP_061012822.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156839.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..675
                     /product="protein PALS1 isoform X1"
                     /calculated_mol_wt=76985
     Region          123..170
                     /region_name="L27_N"
                     /note="pfam09060"
                     /db_xref="CDD:462666"
     Region          189..238
                     /region_name="L27"
                     /note="domain in receptor targeting proteins Lin-2 and
                     Lin-7; smart00569"
                     /db_xref="CDD:197794"
     Region          255..334
                     /region_name="PDZ_MPP5-like"
                     /note="PDZ domain of membrane palmitoylated protein 5
                     (MPP5), Drosophila Stardust, and related domains; cd06798"
                     /db_xref="CDD:467259"
     Site            order(266..272,281,284,314,318,321..322)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467259"
     Region          349..411
                     /region_name="SH3_MPP5"
                     /note="Src Homology 3 domain of Membrane Protein,
                     Palmitoylated 5 (or MAGUK p55 subfamily member 5);
                     cd12036"
                     /db_xref="CDD:212969"
     Site            order(351,375..376)
                     /site_type="other"
                     /note="GuK domain interface [polypeptide binding]"
                     /db_xref="CDD:212969"
     Site            order(354,356,359,370,388..389,408,410..411)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212969"
     Site            order(486,492,509,516,519,528,551,556)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:238026"
     Site            order(486,492)
                     /site_type="other"
                     /note="G-X2-G-X-G-K"
                     /db_xref="CDD:238026"
     Region          491..661
                     /region_name="GuKc"
                     /note="Guanylate kinase homologues; smart00072"
                     /db_xref="CDD:214504"
     CDS             1..675
                     /gene="PALS1"
                     /coded_by="XM_061156839.1:610..2637"
                     /db_xref="GeneID:133066104"
ORIGIN      
        1 mttshmnghv teesdngikn vdlaspeehq khremavdcp gdlgtrmmpv rrsaqlerir
       61 qqqedmrrrr eeegkkqeld lnssmrlkkl aqippktgid npifdteegi vlesphyavk
      121 ilevedlfss lkhiqhtlvd sqsqedisll lqlvqnkdfq nafkihnavt vhmnkasppf
      181 plisnaqdla qevqtvlkpv pqkegqelta llnaphiqal llahdkvaeq emqlepiade
      241 rvyesvgqyg getvkivrie kardiplgat vrnemdsvii srivkggaae ksgllhegde
      301 vleingieir gkdvnevfdl lsdmhgtltf vlipsqqikp ppaketvihv kahfdydpsd
      361 dpyvpcrelg lsfqkgdilh visqedpnww qayregdedn qplaglvpgk sfqqqreamk
      421 qtieedkepe ksgklwcakk nkkkrkkvly nanknddydn eeiltyeems lyhqpanrkr
      481 piiligpqnc gqnelrqrlm nkekdrfasa vphttrnrrd hevagrdyhf vsrqafeadi
      541 aagkfiehge feknlygtsi dsvrqvinsg kicllslrtq slktlrnsdl kpyiifiapp
      601 sqerlralla kegknpkpee lreiiektre meqnnghyfd taivnsdldk ayqellrlin
      661 kldtepqwvp stwlr
//
LOCUS       XP_061012823             675 aa            linear   MAM 02-DEC-2023
DEFINITION  protein PALS1 isoform X1 [Dama dama].
ACCESSION   XP_061012823
VERSION     XP_061012823.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156840.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..675
                     /product="protein PALS1 isoform X1"
                     /calculated_mol_wt=76985
     Region          123..170
                     /region_name="L27_N"
                     /note="pfam09060"
                     /db_xref="CDD:462666"
     Region          189..238
                     /region_name="L27"
                     /note="domain in receptor targeting proteins Lin-2 and
                     Lin-7; smart00569"
                     /db_xref="CDD:197794"
     Region          255..334
                     /region_name="PDZ_MPP5-like"
                     /note="PDZ domain of membrane palmitoylated protein 5
                     (MPP5), Drosophila Stardust, and related domains; cd06798"
                     /db_xref="CDD:467259"
     Site            order(266..272,281,284,314,318,321..322)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467259"
     Region          349..411
                     /region_name="SH3_MPP5"
                     /note="Src Homology 3 domain of Membrane Protein,
                     Palmitoylated 5 (or MAGUK p55 subfamily member 5);
                     cd12036"
                     /db_xref="CDD:212969"
     Site            order(351,375..376)
                     /site_type="other"
                     /note="GuK domain interface [polypeptide binding]"
                     /db_xref="CDD:212969"
     Site            order(354,356,359,370,388..389,408,410..411)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212969"
     Site            order(486,492,509,516,519,528,551,556)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:238026"
     Site            order(486,492)
                     /site_type="other"
                     /note="G-X2-G-X-G-K"
                     /db_xref="CDD:238026"
     Region          491..661
                     /region_name="GuKc"
                     /note="Guanylate kinase homologues; smart00072"
                     /db_xref="CDD:214504"
     CDS             1..675
                     /gene="PALS1"
                     /coded_by="XM_061156840.1:587..2614"
                     /db_xref="GeneID:133066104"
ORIGIN      
        1 mttshmnghv teesdngikn vdlaspeehq khremavdcp gdlgtrmmpv rrsaqlerir
       61 qqqedmrrrr eeegkkqeld lnssmrlkkl aqippktgid npifdteegi vlesphyavk
      121 ilevedlfss lkhiqhtlvd sqsqedisll lqlvqnkdfq nafkihnavt vhmnkasppf
      181 plisnaqdla qevqtvlkpv pqkegqelta llnaphiqal llahdkvaeq emqlepiade
      241 rvyesvgqyg getvkivrie kardiplgat vrnemdsvii srivkggaae ksgllhegde
      301 vleingieir gkdvnevfdl lsdmhgtltf vlipsqqikp ppaketvihv kahfdydpsd
      361 dpyvpcrelg lsfqkgdilh visqedpnww qayregdedn qplaglvpgk sfqqqreamk
      421 qtieedkepe ksgklwcakk nkkkrkkvly nanknddydn eeiltyeems lyhqpanrkr
      481 piiligpqnc gqnelrqrlm nkekdrfasa vphttrnrrd hevagrdyhf vsrqafeadi
      541 aagkfiehge feknlygtsi dsvrqvinsg kicllslrtq slktlrnsdl kpyiifiapp
      601 sqerlralla kegknpkpee lreiiektre meqnnghyfd taivnsdldk ayqellrlin
      661 kldtepqwvp stwlr
//
LOCUS       XP_061012824             675 aa            linear   MAM 02-DEC-2023
DEFINITION  protein PALS1 isoform X1 [Dama dama].
ACCESSION   XP_061012824
VERSION     XP_061012824.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156841.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..675
                     /product="protein PALS1 isoform X1"
                     /calculated_mol_wt=76985
     Region          123..170
                     /region_name="L27_N"
                     /note="pfam09060"
                     /db_xref="CDD:462666"
     Region          189..238
                     /region_name="L27"
                     /note="domain in receptor targeting proteins Lin-2 and
                     Lin-7; smart00569"
                     /db_xref="CDD:197794"
     Region          255..334
                     /region_name="PDZ_MPP5-like"
                     /note="PDZ domain of membrane palmitoylated protein 5
                     (MPP5), Drosophila Stardust, and related domains; cd06798"
                     /db_xref="CDD:467259"
     Site            order(266..272,281,284,314,318,321..322)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467259"
     Region          349..411
                     /region_name="SH3_MPP5"
                     /note="Src Homology 3 domain of Membrane Protein,
                     Palmitoylated 5 (or MAGUK p55 subfamily member 5);
                     cd12036"
                     /db_xref="CDD:212969"
     Site            order(351,375..376)
                     /site_type="other"
                     /note="GuK domain interface [polypeptide binding]"
                     /db_xref="CDD:212969"
     Site            order(354,356,359,370,388..389,408,410..411)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212969"
     Site            order(486,492,509,516,519,528,551,556)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:238026"
     Site            order(486,492)
                     /site_type="other"
                     /note="G-X2-G-X-G-K"
                     /db_xref="CDD:238026"
     Region          491..661
                     /region_name="GuKc"
                     /note="Guanylate kinase homologues; smart00072"
                     /db_xref="CDD:214504"
     CDS             1..675
                     /gene="PALS1"
                     /coded_by="XM_061156841.1:524..2551"
                     /db_xref="GeneID:133066104"
ORIGIN      
        1 mttshmnghv teesdngikn vdlaspeehq khremavdcp gdlgtrmmpv rrsaqlerir
       61 qqqedmrrrr eeegkkqeld lnssmrlkkl aqippktgid npifdteegi vlesphyavk
      121 ilevedlfss lkhiqhtlvd sqsqedisll lqlvqnkdfq nafkihnavt vhmnkasppf
      181 plisnaqdla qevqtvlkpv pqkegqelta llnaphiqal llahdkvaeq emqlepiade
      241 rvyesvgqyg getvkivrie kardiplgat vrnemdsvii srivkggaae ksgllhegde
      301 vleingieir gkdvnevfdl lsdmhgtltf vlipsqqikp ppaketvihv kahfdydpsd
      361 dpyvpcrelg lsfqkgdilh visqedpnww qayregdedn qplaglvpgk sfqqqreamk
      421 qtieedkepe ksgklwcakk nkkkrkkvly nanknddydn eeiltyeems lyhqpanrkr
      481 piiligpqnc gqnelrqrlm nkekdrfasa vphttrnrrd hevagrdyhf vsrqafeadi
      541 aagkfiehge feknlygtsi dsvrqvinsg kicllslrtq slktlrnsdl kpyiifiapp
      601 sqerlralla kegknpkpee lreiiektre meqnnghyfd taivnsdldk ayqellrlin
      661 kldtepqwvp stwlr
//
LOCUS       XP_061012826             675 aa            linear   MAM 02-DEC-2023
DEFINITION  protein PALS1 isoform X1 [Dama dama].
ACCESSION   XP_061012826
VERSION     XP_061012826.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156843.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..675
                     /product="protein PALS1 isoform X1"
                     /calculated_mol_wt=76985
     Region          123..170
                     /region_name="L27_N"
                     /note="pfam09060"
                     /db_xref="CDD:462666"
     Region          189..238
                     /region_name="L27"
                     /note="domain in receptor targeting proteins Lin-2 and
                     Lin-7; smart00569"
                     /db_xref="CDD:197794"
     Region          255..334
                     /region_name="PDZ_MPP5-like"
                     /note="PDZ domain of membrane palmitoylated protein 5
                     (MPP5), Drosophila Stardust, and related domains; cd06798"
                     /db_xref="CDD:467259"
     Site            order(266..272,281,284,314,318,321..322)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467259"
     Region          349..411
                     /region_name="SH3_MPP5"
                     /note="Src Homology 3 domain of Membrane Protein,
                     Palmitoylated 5 (or MAGUK p55 subfamily member 5);
                     cd12036"
                     /db_xref="CDD:212969"
     Site            order(351,375..376)
                     /site_type="other"
                     /note="GuK domain interface [polypeptide binding]"
                     /db_xref="CDD:212969"
     Site            order(354,356,359,370,388..389,408,410..411)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212969"
     Site            order(486,492,509,516,519,528,551,556)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:238026"
     Site            order(486,492)
                     /site_type="other"
                     /note="G-X2-G-X-G-K"
                     /db_xref="CDD:238026"
     Region          491..661
                     /region_name="GuKc"
                     /note="Guanylate kinase homologues; smart00072"
                     /db_xref="CDD:214504"
     CDS             1..675
                     /gene="PALS1"
                     /coded_by="XM_061156843.1:501..2528"
                     /db_xref="GeneID:133066104"
ORIGIN      
        1 mttshmnghv teesdngikn vdlaspeehq khremavdcp gdlgtrmmpv rrsaqlerir
       61 qqqedmrrrr eeegkkqeld lnssmrlkkl aqippktgid npifdteegi vlesphyavk
      121 ilevedlfss lkhiqhtlvd sqsqedisll lqlvqnkdfq nafkihnavt vhmnkasppf
      181 plisnaqdla qevqtvlkpv pqkegqelta llnaphiqal llahdkvaeq emqlepiade
      241 rvyesvgqyg getvkivrie kardiplgat vrnemdsvii srivkggaae ksgllhegde
      301 vleingieir gkdvnevfdl lsdmhgtltf vlipsqqikp ppaketvihv kahfdydpsd
      361 dpyvpcrelg lsfqkgdilh visqedpnww qayregdedn qplaglvpgk sfqqqreamk
      421 qtieedkepe ksgklwcakk nkkkrkkvly nanknddydn eeiltyeems lyhqpanrkr
      481 piiligpqnc gqnelrqrlm nkekdrfasa vphttrnrrd hevagrdyhf vsrqafeadi
      541 aagkfiehge feknlygtsi dsvrqvinsg kicllslrtq slktlrnsdl kpyiifiapp
      601 sqerlralla kegknpkpee lreiiektre meqnnghyfd taivnsdldk ayqellrlin
      661 kldtepqwvp stwlr
//
LOCUS       XP_061012827             641 aa            linear   MAM 02-DEC-2023
DEFINITION  protein PALS1 isoform X2 [Dama dama].
ACCESSION   XP_061012827
VERSION     XP_061012827.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156844.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..641
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..641
                     /product="protein PALS1 isoform X2"
                     /calculated_mol_wt=73143
     Region          89..136
                     /region_name="L27_N"
                     /note="pfam09060"
                     /db_xref="CDD:462666"
     Region          155..204
                     /region_name="L27"
                     /note="domain in receptor targeting proteins Lin-2 and
                     Lin-7; smart00569"
                     /db_xref="CDD:197794"
     Region          221..300
                     /region_name="PDZ_MPP5-like"
                     /note="PDZ domain of membrane palmitoylated protein 5
                     (MPP5), Drosophila Stardust, and related domains; cd06798"
                     /db_xref="CDD:467259"
     Site            order(232..238,247,250,280,284,287..288)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467259"
     Region          315..377
                     /region_name="SH3_MPP5"
                     /note="Src Homology 3 domain of Membrane Protein,
                     Palmitoylated 5 (or MAGUK p55 subfamily member 5);
                     cd12036"
                     /db_xref="CDD:212969"
     Site            order(317,341..342)
                     /site_type="other"
                     /note="GuK domain interface [polypeptide binding]"
                     /db_xref="CDD:212969"
     Site            order(320,322,325,336,354..355,374,376..377)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212969"
     Site            order(452,458,475,482,485,494,517,522)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:238026"
     Site            order(452,458)
                     /site_type="other"
                     /note="G-X2-G-X-G-K"
                     /db_xref="CDD:238026"
     Region          457..627
                     /region_name="GuKc"
                     /note="Guanylate kinase homologues; smart00072"
                     /db_xref="CDD:214504"
     CDS             1..641
                     /gene="PALS1"
                     /coded_by="XM_061156844.1:251..2176"
                     /db_xref="GeneID:133066104"
ORIGIN      
        1 mavdcpgdlg trmmpvrrsa qlerirqqqe dmrrrreeeg kkqeldlnss mrlkklaqip
       61 pktgidnpif dteegivles phyavkilev edlfsslkhi qhtlvdsqsq edislllqlv
      121 qnkdfqnafk ihnavtvhmn kasppfplis naqdlaqevq tvlkpvpqke gqeltallna
      181 phiqalllah dkvaeqemql epiadervye svgqyggetv kivriekard iplgatvrne
      241 mdsviisriv kggaaeksgl lhegdevlei ngieirgkdv nevfdllsdm hgtltfvlip
      301 sqqikpppak etvihvkahf dydpsddpyv pcrelglsfq kgdilhvisq edpnwwqayr
      361 egdednqpla glvpgksfqq qreamkqtie edkepeksgk lwcakknkkk rkkvlynank
      421 nddydneeil tyeemslyhq panrkrpiil igpqncgqne lrqrlmnkek drfasavpht
      481 trnrrdheva grdyhfvsrq afeadiaagk fiehgefekn lygtsidsvr qvinsgkicl
      541 lslrtqslkt lrnsdlkpyi ifiappsqer lrallakegk npkpeelrei iektremeqn
      601 nghyfdtaiv nsdldkayqe llrlinkldt epqwvpstwl r
//
LOCUS       XP_061012828             641 aa            linear   MAM 02-DEC-2023
DEFINITION  protein PALS1 isoform X2 [Dama dama].
ACCESSION   XP_061012828
VERSION     XP_061012828.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156845.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..641
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..641
                     /product="protein PALS1 isoform X2"
                     /calculated_mol_wt=73143
     Region          89..136
                     /region_name="L27_N"
                     /note="pfam09060"
                     /db_xref="CDD:462666"
     Region          155..204
                     /region_name="L27"
                     /note="domain in receptor targeting proteins Lin-2 and
                     Lin-7; smart00569"
                     /db_xref="CDD:197794"
     Region          221..300
                     /region_name="PDZ_MPP5-like"
                     /note="PDZ domain of membrane palmitoylated protein 5
                     (MPP5), Drosophila Stardust, and related domains; cd06798"
                     /db_xref="CDD:467259"
     Site            order(232..238,247,250,280,284,287..288)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467259"
     Region          315..377
                     /region_name="SH3_MPP5"
                     /note="Src Homology 3 domain of Membrane Protein,
                     Palmitoylated 5 (or MAGUK p55 subfamily member 5);
                     cd12036"
                     /db_xref="CDD:212969"
     Site            order(317,341..342)
                     /site_type="other"
                     /note="GuK domain interface [polypeptide binding]"
                     /db_xref="CDD:212969"
     Site            order(320,322,325,336,354..355,374,376..377)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212969"
     Site            order(452,458,475,482,485,494,517,522)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:238026"
     Site            order(452,458)
                     /site_type="other"
                     /note="G-X2-G-X-G-K"
                     /db_xref="CDD:238026"
     Region          457..627
                     /region_name="GuKc"
                     /note="Guanylate kinase homologues; smart00072"
                     /db_xref="CDD:214504"
     CDS             1..641
                     /gene="PALS1"
                     /coded_by="XM_061156845.1:463..2388"
                     /db_xref="GeneID:133066104"
ORIGIN      
        1 mavdcpgdlg trmmpvrrsa qlerirqqqe dmrrrreeeg kkqeldlnss mrlkklaqip
       61 pktgidnpif dteegivles phyavkilev edlfsslkhi qhtlvdsqsq edislllqlv
      121 qnkdfqnafk ihnavtvhmn kasppfplis naqdlaqevq tvlkpvpqke gqeltallna
      181 phiqalllah dkvaeqemql epiadervye svgqyggetv kivriekard iplgatvrne
      241 mdsviisriv kggaaeksgl lhegdevlei ngieirgkdv nevfdllsdm hgtltfvlip
      301 sqqikpppak etvihvkahf dydpsddpyv pcrelglsfq kgdilhvisq edpnwwqayr
      361 egdednqpla glvpgksfqq qreamkqtie edkepeksgk lwcakknkkk rkkvlynank
      421 nddydneeil tyeemslyhq panrkrpiil igpqncgqne lrqrlmnkek drfasavpht
      481 trnrrdheva grdyhfvsrq afeadiaagk fiehgefekn lygtsidsvr qvinsgkicl
      541 lslrtqslkt lrnsdlkpyi ifiappsqer lrallakegk npkpeelrei iektremeqn
      601 nghyfdtaiv nsdldkayqe llrlinkldt epqwvpstwl r
//
LOCUS       XP_061012829             641 aa            linear   MAM 02-DEC-2023
DEFINITION  protein PALS1 isoform X2 [Dama dama].
ACCESSION   XP_061012829
VERSION     XP_061012829.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156846.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..641
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..641
                     /product="protein PALS1 isoform X2"
                     /calculated_mol_wt=73143
     Region          89..136
                     /region_name="L27_N"
                     /note="pfam09060"
                     /db_xref="CDD:462666"
     Region          155..204
                     /region_name="L27"
                     /note="domain in receptor targeting proteins Lin-2 and
                     Lin-7; smart00569"
                     /db_xref="CDD:197794"
     Region          221..300
                     /region_name="PDZ_MPP5-like"
                     /note="PDZ domain of membrane palmitoylated protein 5
                     (MPP5), Drosophila Stardust, and related domains; cd06798"
                     /db_xref="CDD:467259"
     Site            order(232..238,247,250,280,284,287..288)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467259"
     Region          315..377
                     /region_name="SH3_MPP5"
                     /note="Src Homology 3 domain of Membrane Protein,
                     Palmitoylated 5 (or MAGUK p55 subfamily member 5);
                     cd12036"
                     /db_xref="CDD:212969"
     Site            order(317,341..342)
                     /site_type="other"
                     /note="GuK domain interface [polypeptide binding]"
                     /db_xref="CDD:212969"
     Site            order(320,322,325,336,354..355,374,376..377)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212969"
     Site            order(452,458,475,482,485,494,517,522)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:238026"
     Site            order(452,458)
                     /site_type="other"
                     /note="G-X2-G-X-G-K"
                     /db_xref="CDD:238026"
     Region          457..627
                     /region_name="GuKc"
                     /note="Guanylate kinase homologues; smart00072"
                     /db_xref="CDD:214504"
     CDS             1..641
                     /gene="PALS1"
                     /coded_by="XM_061156846.1:377..2302"
                     /db_xref="GeneID:133066104"
ORIGIN      
        1 mavdcpgdlg trmmpvrrsa qlerirqqqe dmrrrreeeg kkqeldlnss mrlkklaqip
       61 pktgidnpif dteegivles phyavkilev edlfsslkhi qhtlvdsqsq edislllqlv
      121 qnkdfqnafk ihnavtvhmn kasppfplis naqdlaqevq tvlkpvpqke gqeltallna
      181 phiqalllah dkvaeqemql epiadervye svgqyggetv kivriekard iplgatvrne
      241 mdsviisriv kggaaeksgl lhegdevlei ngieirgkdv nevfdllsdm hgtltfvlip
      301 sqqikpppak etvihvkahf dydpsddpyv pcrelglsfq kgdilhvisq edpnwwqayr
      361 egdednqpla glvpgksfqq qreamkqtie edkepeksgk lwcakknkkk rkkvlynank
      421 nddydneeil tyeemslyhq panrkrpiil igpqncgqne lrqrlmnkek drfasavpht
      481 trnrrdheva grdyhfvsrq afeadiaagk fiehgefekn lygtsidsvr qvinsgkicl
      541 lslrtqslkt lrnsdlkpyi ifiappsqer lrallakegk npkpeelrei iektremeqn
      601 nghyfdtaiv nsdldkayqe llrlinkldt epqwvpstwl r
//
LOCUS       XP_061012830             315 aa            linear   MAM 02-DEC-2023
DEFINITION  eukaryotic translation initiation factor 2 subunit 1 [Dama dama].
ACCESSION   XP_061012830
VERSION     XP_061012830.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156847.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..315
                     /product="eukaryotic translation initiation factor 2
                     subunit 1"
                     /calculated_mol_wt=35977
     Region          4..315
                     /region_name="PTZ00248"
                     /note="eukaryotic translation initiation factor 2 subunit
                     1; Provisional"
                     /db_xref="CDD:240329"
     CDS             1..315
                     /gene="EIF2S1"
                     /coded_by="XM_061156847.1:84..1031"
                     /db_xref="GeneID:133066105"
ORIGIN      
        1 mpglscrfyq hkfpevedvv mvnvrsiaem gayvslleyn niegmillse lsrrrirsin
       61 klirigrnec vvvirvdkek gyidlskrrv speeaikced kftksktvys ilrhvaevle
      121 ytkdeqlesl fqrtawvfdd kykrpgygay dafkhavsdp sildsldlne derevlinni
      181 nrrltpqavk iradievacy gyegidavke alraglncst etmpikinli appryvmttt
      241 tlerteglsv lnqamavike kieekrgvfn vqmepkvvtd tdetelarql erlerenaev
      301 dgdddaeeme akaed
//
LOCUS       XP_061012831             315 aa            linear   MAM 02-DEC-2023
DEFINITION  eukaryotic translation initiation factor 2 subunit 1 [Dama dama].
ACCESSION   XP_061012831
VERSION     XP_061012831.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156848.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..315
                     /product="eukaryotic translation initiation factor 2
                     subunit 1"
                     /calculated_mol_wt=35977
     Region          4..315
                     /region_name="PTZ00248"
                     /note="eukaryotic translation initiation factor 2 subunit
                     1; Provisional"
                     /db_xref="CDD:240329"
     CDS             1..315
                     /gene="EIF2S1"
                     /coded_by="XM_061156848.1:167..1114"
                     /db_xref="GeneID:133066105"
ORIGIN      
        1 mpglscrfyq hkfpevedvv mvnvrsiaem gayvslleyn niegmillse lsrrrirsin
       61 klirigrnec vvvirvdkek gyidlskrrv speeaikced kftksktvys ilrhvaevle
      121 ytkdeqlesl fqrtawvfdd kykrpgygay dafkhavsdp sildsldlne derevlinni
      181 nrrltpqavk iradievacy gyegidavke alraglncst etmpikinli appryvmttt
      241 tlerteglsv lnqamavike kieekrgvfn vqmepkvvtd tdetelarql erlerenaev
      301 dgdddaeeme akaed
//
LOCUS       XP_061012832             247 aa            linear   MAM 02-DEC-2023
DEFINITION  V-type proton ATPase subunit D [Dama dama].
ACCESSION   XP_061012832
VERSION     XP_061012832.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156849.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..247
                     /product="V-type proton ATPase subunit D"
                     /calculated_mol_wt=28078
     Region          15..207
                     /region_name="ATP-synt_D"
                     /note="ATP synthase subunit D; pfam01813"
                     /db_xref="CDD:460343"
     CDS             1..247
                     /gene="ATP6V1D"
                     /coded_by="XM_061156849.1:118..861"
                     /db_xref="GeneID:133066106"
ORIGIN      
        1 msgkdrieif psrmaqtimk arlkgaqtgr nllkkksdal tlrfrqilkk iietkmlmga
       61 vmreaafsla eakftagdfs ttviqnvnka qvkirakkdn vagvtlpvfe hyhegtdsye
      121 ltglarggeq laklkrnyak avellvelas lqtsfvtlde aikitnrrvn aiehviipri
      181 ertlayiite lderereefy rlkkiqekkk vlkekseqdl eqrraagevm epanllaeek
      241 dedllfe
//
LOCUS       XP_061012833             353 aa            linear   MAM 02-DEC-2023
DEFINITION  pleckstrin-2 [Dama dama].
ACCESSION   XP_061012833
VERSION     XP_061012833.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156850.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..353
                     /product="pleckstrin-2"
                     /calculated_mol_wt=39686
     Region          3..113
                     /region_name="PH1_Pleckstrin_2"
                     /note="Pleckstrin 2 Pleckstrin homology (PH) domain,
                     repeat 1; cd13301"
                     /db_xref="CDD:270113"
     Region          128..236
                     /region_name="DEP_PLEK2"
                     /note="DEP (Dishevelled, Egl-10, and Pleckstrin) domain
                     found in pleckstrin 2-like proteins. Pleckstrin 2 is found
                     in a wide variety of cell types, which suggest a more
                     general role in signaling than pleckstrin 1.
                     Pleckstrin-like proteins contain a central...; cd04444"
                     /db_xref="CDD:239891"
     Region          243..353
                     /region_name="PH2_Pleckstrin_2"
                     /note="Pleckstrin 2 Pleckstrin homology (PH) domain,
                     repeat 2; cd13302"
                     /db_xref="CDD:270114"
     Site            order(255,257..260,280,291,332)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:270114"
     Site            order(275,277,279,290,293,295,297..298,327)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:270114"
     CDS             1..353
                     /gene="PLEK2"
                     /coded_by="XM_061156850.1:168..1229"
                     /db_xref="GeneID:133066107"
ORIGIN      
        1 medgvlkegf lvkrghivhn wkvrwfilrq ntllyykfeg grkvtppkgc illdgctitc
       61 pcleyenrpl liklktqtst eylleacsre erdawafeit gaihagqpgk vqqlhllkns
      121 fklpphislh rivdkmrdst cgirpspnme qgstykktfi gsslvdwlls sgfaasrlea
      181 vtlasvlmee nflrpvgtrs tgairsgdls eqflddstal ytfaesckkk ispkeeisls
      241 tmelsgtvvk qgylakqghk rknwkvrrfv lrkdpaflhy ydpskeenrp vggfslrgsl
      301 vsaledngvp tgvkgnvqgn lfkvitkddi hyyiqasska ersewieaik klt
//
LOCUS       XP_061012834             417 aa            linear   MAM 02-DEC-2023
DEFINITION  Golgi-associated RAB2 interactor protein 2 isoform X1 [Dama dama].
ACCESSION   XP_061012834
VERSION     XP_061012834.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156851.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..417
                     /product="Golgi-associated RAB2 interactor protein 2
                     isoform X1"
                     /calculated_mol_wt=45994
     Region          115..185
                     /region_name="DUF3699"
                     /note="Protein of unknown function (DUF3699); pfam12480"
                     /db_xref="CDD:463601"
     CDS             1..417
                     /gene="GARIN2"
                     /coded_by="XM_061156851.1:2651..3904"
                     /db_xref="GeneID:133066108"
ORIGIN      
        1 mkksnrkspt ridkqddicv pdfkdpgelq nmlnggeyap fvsppilesn fiqvnrrges
       61 iylhnranwv tvgicasnpt iktpnvmlla hmtpttqkds eslfksllts pspenlvltr
      121 flplqfvtls vhdaenmrik vklvsgrayy lqlcapagkq dslfhqwvel isllneekak
      181 askvsevssl seitnstdit gsvdimdiaa fpaiqtshls tcsdpsndve sidfseftdi
      241 tdvtdvtdip enevteapdi nivtevtevt dicevtassg vrvvfenddi lrakqeekek
      301 menilksgcl rdtksknefr esskhvtisn ltltfegerc fqttlipeed etdkskelsd
      361 rppeiktvas esttlkaees sysvvsdslg phelqhtrlp cssaspgpcs nacplsr
//
LOCUS       XP_061012835             397 aa            linear   MAM 02-DEC-2023
DEFINITION  Golgi-associated RAB2 interactor protein 2 isoform X2 [Dama dama].
ACCESSION   XP_061012835
VERSION     XP_061012835.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156852.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..397
                     /product="Golgi-associated RAB2 interactor protein 2
                     isoform X2"
                     /calculated_mol_wt=44061
     Region          115..185
                     /region_name="DUF3699"
                     /note="Protein of unknown function (DUF3699); pfam12480"
                     /db_xref="CDD:463601"
     CDS             1..397
                     /gene="GARIN2"
                     /coded_by="XM_061156852.1:2651..3844"
                     /db_xref="GeneID:133066108"
ORIGIN      
        1 mkksnrkspt ridkqddicv pdfkdpgelq nmlnggeyap fvsppilesn fiqvnrrges
       61 iylhnranwv tvgicasnpt iktpnvmlla hmtpttqkds eslfksllts pspenlvltr
      121 flplqfvtls vhdaenmrik vklvsgrayy lqlcapagkq dslfhqwvel isllneekak
      181 askvsevssl seitnstdit gsvdimdiaa fpaiqtshls tcsdpsndve sidfseftdi
      241 tdvtdvtdip enevteapdi nivtevtevt dicevtassg vrvvfenddi lrakqeekek
      301 menilksgcl rdtksknefr esskhvtisn ltltfegerc fqttlipeed etdkskelsd
      361 rppeiktvas esttlkaees rsgrtdsdis dkcklin
//
LOCUS       XP_061012836             331 aa            linear   MAM 02-DEC-2023
DEFINITION  Golgi-associated RAB2 interactor protein 2 isoform X3 [Dama dama].
ACCESSION   XP_061012836
VERSION     XP_061012836.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156853.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..331
                     /product="Golgi-associated RAB2 interactor protein 2
                     isoform X3"
                     /calculated_mol_wt=36339
     Region          29..99
                     /region_name="DUF3699"
                     /note="Protein of unknown function (DUF3699); pfam12480"
                     /db_xref="CDD:463601"
     CDS             1..331
                     /gene="GARIN2"
                     /coded_by="XM_061156853.1:2733..3728"
                     /db_xref="GeneID:133066108"
ORIGIN      
        1 mllahmtptt qkdseslfks lltspspenl vltrflplqf vtlsvhdaen mrikvklvsg
       61 rayylqlcap agkqdslfhq wvelisllne ekakaskvse vsslseitns tditgsvdim
      121 diaafpaiqt shlstcsdps ndvesidfse ftditdvtdv tdipenevte apdinivtev
      181 tevtdicevt assgvrvvfe nddilrakqe ekekmenilk sgclrdtksk nefresskhv
      241 tisnltltfe gercfqttli peedetdksk elsdrppeik tvasesttlk aeessysvvs
      301 dslgphelqh trlpcssasp gpcsnacpls r
//
LOCUS       XP_061012837             791 aa            linear   MAM 02-DEC-2023
DEFINITION  gephyrin isoform X1 [Dama dama].
ACCESSION   XP_061012837
VERSION     XP_061012837.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156854.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..791
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..791
                     /product="gephyrin isoform X1"
                     /calculated_mol_wt=85501
     Region          15..169
                     /region_name="MogA_MoaB"
                     /note="MogA_MoaB family. Members of this family are
                     involved in biosynthesis of the molybdenum cofactor (MoCF)
                     an essential cofactor of a diverse group of redox enzymes.
                     MoCF biosynthesis is an evolutionarily conserved pathway
                     present in eubacteria, archaea; cd00886"
                     /db_xref="CDD:238451"
     Site            order(87..89,119,145..146,150,153)
                     /site_type="active"
                     /note="MPT binding site [active]"
                     /db_xref="CDD:238451"
     Site            order(89,91..92,94,98,106..108,113,116..117,127,130,169)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:238451"
     Region          382..788
                     /region_name="MoeA"
                     /note="MoeA family. Members of this family are involved in
                     biosynthesis of the molybdenum cofactor (MoCF), an
                     essential cofactor of a diverse group of redox enzymes.
                     MoCF biosynthesis is an evolutionarily conserved pathway
                     present in eubacteria, archaea and...; cd00887"
                     /db_xref="CDD:238452"
     Site            order(403,518,533..536,538,541..542,544,578,580,583,712,
                     753,784)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238452"
     Site            order(561..562,564,604,628)
                     /site_type="active"
                     /note="putative functional site [active]"
                     /db_xref="CDD:238452"
     Site            order(628..630,680..681,685,688)
                     /site_type="active"
                     /note="putative MPT binding site [active]"
                     /db_xref="CDD:238452"
     CDS             1..791
                     /gene="GPHN"
                     /coded_by="XM_061156854.1:365..2740"
                     /db_xref="GeneID:133066110"
ORIGIN      
        1 mategmiltn hdhqirvgvl tvsdscfrnl aedrsginlk dlvqdpsllg gtisaykivp
       61 deieeiketl idwcdekeln lilttggtgf aprdvtpeat keviereapg malamlmgsl
      121 nvtplgmlsr pvcgirgktl iinlpgskkg sqecfqfilp alphaidllr daivkvkevh
      181 deledlpspp pplsppptts phkqtedkgv qceeeeeekk dsgvasteds ssshitaaai
      241 aakkhpfyts pavimahgeq pipglisysh datgsaeepi pdsiisrgvq vlprdtasls
      301 ttpsespraq atsrlstasc ptpkqirrpd eskgvasrvg slkvqsrcss kenilrashs
      361 avditkvarr hrmspfplts mdkafitvle mtpvlgteii nyrdgmgrvl aqdvyakdnl
      421 ppfpasvkdg yavraadgpg drfiigesqa geqptqtvmp gqvmrvttga pipcgadavv
      481 qvedtelire sddgteelev rilvqarpgq dirpighdik rgecvlakgt hmgpseigll
      541 atvgvtevev nkfpvvavms tgnellnped dllpgkirds nrstllatiq ehgyptinlg
      601 ivgdnpddll nalnegisra dviitsggvs mgekdylkqv ldidlhaqih fgrvfmkpgl
      661 pttfatldid gvrkiifalp gnpvsavvtc nlfvvpalrk mqgildprpt iikarlscdv
      721 kldprpeyhr ciltwhhqep lpwaqstgnq mssrlmsmrs angllmlppk teqyvelhkg
      781 evvdvmvigr l
//
LOCUS       XP_061012838             772 aa            linear   MAM 02-DEC-2023
DEFINITION  gephyrin isoform X2 [Dama dama].
ACCESSION   XP_061012838
VERSION     XP_061012838.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156855.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..772
                     /product="gephyrin isoform X2"
                     /calculated_mol_wt=83436
     Region          15..169
                     /region_name="MogA_MoaB"
                     /note="MogA_MoaB family. Members of this family are
                     involved in biosynthesis of the molybdenum cofactor (MoCF)
                     an essential cofactor of a diverse group of redox enzymes.
                     MoCF biosynthesis is an evolutionarily conserved pathway
                     present in eubacteria, archaea; cd00886"
                     /db_xref="CDD:238451"
     Site            order(87..89,119,145..146,150,153)
                     /site_type="active"
                     /note="MPT binding site [active]"
                     /db_xref="CDD:238451"
     Site            order(89,91..92,94,98,106..108,113,116..117,127,130,169)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:238451"
     Region          363..769
                     /region_name="MoeA"
                     /note="MoeA family. Members of this family are involved in
                     biosynthesis of the molybdenum cofactor (MoCF), an
                     essential cofactor of a diverse group of redox enzymes.
                     MoCF biosynthesis is an evolutionarily conserved pathway
                     present in eubacteria, archaea and...; cd00887"
                     /db_xref="CDD:238452"
     Site            order(384,499,514..517,519,522..523,525,559,561,564,693,
                     734,765)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238452"
     Site            order(542..543,545,585,609)
                     /site_type="active"
                     /note="putative functional site [active]"
                     /db_xref="CDD:238452"
     Site            order(609..611,661..662,666,669)
                     /site_type="active"
                     /note="putative MPT binding site [active]"
                     /db_xref="CDD:238452"
     CDS             1..772
                     /gene="GPHN"
                     /coded_by="XM_061156855.1:364..2682"
                     /db_xref="GeneID:133066110"
ORIGIN      
        1 mategmiltn hdhqirvgvl tvsdscfrnl aedrsginlk dlvqdpsllg gtisaykivp
       61 deieeiketl idwcdekeln lilttggtgf aprdvtpeat keviereapg malamlmgsl
      121 nvtplgmlsr pvcgirgktl iinlpgskkg sqecfqfilp alphaidllr daivkvkevh
      181 deledlpspp pplsppptts phkqtedkgv qceeeeeekk dsgvasteds ssshitaaai
      241 aakkhpfyts pavimahgeq pipglisysh datgsaeepi pdsiisrgvq vlprdtasls
      301 ttpsespraq atsrlstasc ptpkvqsrcs skenilrash savditkvar rhrmspfplt
      361 smdkafitvl emtpvlgtei inyrdgmgrv laqdvyakdn lppfpasvkd gyavraadgp
      421 gdrfiigesq ageqptqtvm pgqvmrvttg apipcgadav vqvedtelir esddgteele
      481 vrilvqarpg qdirpighdi krgecvlakg thmgpseigl latvgvteve vnkfpvvavm
      541 stgnellnpe ddllpgkird snrstllati qehgyptinl givgdnpddl lnalnegisr
      601 adviitsggv smgekdylkq vldidlhaqi hfgrvfmkpg lpttfatldi dgvrkiifal
      661 pgnpvsavvt cnlfvvpalr kmqgildprp tiikarlscd vkldprpeyh rciltwhhqe
      721 plpwaqstgn qmssrlmsmr sangllmlpp kteqyvelhk gevvdvmvig rl
//
LOCUS       XP_061012839             804 aa            linear   MAM 02-DEC-2023
DEFINITION  gephyrin isoform X3 [Dama dama].
ACCESSION   XP_061012839
VERSION     XP_061012839.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156856.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..804
                     /product="gephyrin isoform X3"
                     /calculated_mol_wt=86953
     Region          15..182
                     /region_name="MogA_MoaB"
                     /note="MogA_MoaB family. Members of this family are
                     involved in biosynthesis of the molybdenum cofactor (MoCF)
                     an essential cofactor of a diverse group of redox enzymes.
                     MoCF biosynthesis is an evolutionarily conserved pathway
                     present in eubacteria, archaea; cd00886"
                     /db_xref="CDD:238451"
     Site            order(87..89,132,158..159,163,166)
                     /site_type="active"
                     /note="MPT binding site [active]"
                     /db_xref="CDD:238451"
     Site            order(89,91..92,94,98,119..121,126,129..130,140,143,182)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:238451"
     Region          395..801
                     /region_name="MoeA"
                     /note="MoeA family. Members of this family are involved in
                     biosynthesis of the molybdenum cofactor (MoCF), an
                     essential cofactor of a diverse group of redox enzymes.
                     MoCF biosynthesis is an evolutionarily conserved pathway
                     present in eubacteria, archaea and...; cd00887"
                     /db_xref="CDD:238452"
     Site            order(416,531,546..549,551,554..555,557,591,593,596,725,
                     766,797)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238452"
     Site            order(574..575,577,617,641)
                     /site_type="active"
                     /note="putative functional site [active]"
                     /db_xref="CDD:238452"
     Site            order(641..643,693..694,698,701)
                     /site_type="active"
                     /note="putative MPT binding site [active]"
                     /db_xref="CDD:238452"
     CDS             1..804
                     /gene="GPHN"
                     /coded_by="XM_061156856.1:372..2786"
                     /db_xref="GeneID:133066110"
ORIGIN      
        1 mategmiltn hdhqirvgvl tvsdscfrnl aedrsginlk dlvqdpsllg gtisaykivp
       61 deieeiketl idwcdekeln lilttggtgf aprdvtpekf ptfpfcglqk gatkeviere
      121 apgmalamlm gslnvtplgm lsrpvcgirg ktliinlpgs kkgsqecfqf ilpalphaid
      181 llrdaivkvk evhdeledlp spppplsppp ttsphkqted kgvqceeeee ekkdsgvast
      241 edsssshita aaiaakkhpf ytspavimah geqpipglis yshdatgsae epipdsiisr
      301 gvqvlprdta slsttpsesp raqatsrlst ascptpkqir rpdeskgvas rvgslkvqsr
      361 csskenilra shsavditkv arrhrmspfp ltsmdkafit vlemtpvlgt eiinyrdgmg
      421 rvlaqdvyak dnlppfpasv kdgyavraad gpgdrfiige sqageqptqt vmpgqvmrvt
      481 tgapipcgad avvqvedtel iresddgtee levrilvqar pgqdirpigh dikrgecvla
      541 kgthmgpsei gllatvgvte vevnkfpvva vmstgnelln peddllpgki rdsnrstlla
      601 tiqehgypti nlgivgdnpd dllnalnegi sradviitsg gvsmgekdyl kqvldidlha
      661 qihfgrvfmk pglpttfatl didgvrkiif alpgnpvsav vtcnlfvvpa lrkmqgildp
      721 rptiikarls cdvkldprpe yhrciltwhh qeplpwaqst gnqmssrlms mrsangllml
      781 ppkteqyvel hkgevvdvmv igrl
//
LOCUS       XP_061012840             575 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-(1,6)-fucosyltransferase isoform X1 [Dama dama].
ACCESSION   XP_061012840
VERSION     XP_061012840.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156857.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..575
                     /product="alpha-(1,6)-fucosyltransferase isoform X1"
                     /calculated_mol_wt=66341
     Region          68..498
                     /region_name="FUT8_N_cat"
                     /note="Alpha-(1,6)-fucosyltransferase N- and catalytic
                     domains; pfam19745"
                     /db_xref="CDD:466170"
     Region          506..560
                     /region_name="SH3_Fut8"
                     /note="Src homology 3 domain of
                     Alpha1,6-fucosyltransferase (Fut8); cd11792"
                     /db_xref="CDD:212726"
     Site            order(511,513,516,520,538..539,554,556..557)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212726"
     CDS             1..575
                     /gene="FUT8"
                     /coded_by="XM_061156857.1:630..2357"
                     /db_xref="GeneID:133066111"
ORIGIN      
        1 mrpwtgswrw imlilfawgt llfyigghlv rdndhpdhss relskilakl erlkqqnedl
       61 rrmaeslrip egpidqgpas griraleeql vkakeqieny kkqtrnglgk dheilrrrie
      121 ngakelwffl qselkklknl egnelqrhad eflsdlghhe rsimtdlyyl sqtdgagdwr
      181 ekeakdltel vqrritylqn pkdcskakkl vcninkgcgy gcqlhhvvyc fmiaygtqrt
      241 lileshnwry atggwetvfr pvsetctdrs gvstghwsge vkdknvqvve lpivdslhpr
      301 ppylplavpe dladrlvrvh gdpavwwvsq fvkylirpqp wlekeieeat kklgfkhpvi
      361 gvhvrrtdkv gteaafhpie eymvhveehf qllarrmqvd kkrvylatdd psllkeaktk
      421 ypnyefisdn siswsaglhn rytenslrgv ildihflsqa dflvctfssq vcrvayeimq
      481 tlhpdasanf hslddiyyfg gqnahnqiai ypheprtade ipmepgdiig vagnhwdgys
      541 kgvnrklgrt glypsykvre kietvkypty peaek
//
LOCUS       XP_061012841             575 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-(1,6)-fucosyltransferase isoform X1 [Dama dama].
ACCESSION   XP_061012841
VERSION     XP_061012841.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156858.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..575
                     /product="alpha-(1,6)-fucosyltransferase isoform X1"
                     /calculated_mol_wt=66341
     Region          68..498
                     /region_name="FUT8_N_cat"
                     /note="Alpha-(1,6)-fucosyltransferase N- and catalytic
                     domains; pfam19745"
                     /db_xref="CDD:466170"
     Region          506..560
                     /region_name="SH3_Fut8"
                     /note="Src homology 3 domain of
                     Alpha1,6-fucosyltransferase (Fut8); cd11792"
                     /db_xref="CDD:212726"
     Site            order(511,513,516,520,538..539,554,556..557)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212726"
     CDS             1..575
                     /gene="FUT8"
                     /coded_by="XM_061156858.1:547..2274"
                     /db_xref="GeneID:133066111"
ORIGIN      
        1 mrpwtgswrw imlilfawgt llfyigghlv rdndhpdhss relskilakl erlkqqnedl
       61 rrmaeslrip egpidqgpas griraleeql vkakeqieny kkqtrnglgk dheilrrrie
      121 ngakelwffl qselkklknl egnelqrhad eflsdlghhe rsimtdlyyl sqtdgagdwr
      181 ekeakdltel vqrritylqn pkdcskakkl vcninkgcgy gcqlhhvvyc fmiaygtqrt
      241 lileshnwry atggwetvfr pvsetctdrs gvstghwsge vkdknvqvve lpivdslhpr
      301 ppylplavpe dladrlvrvh gdpavwwvsq fvkylirpqp wlekeieeat kklgfkhpvi
      361 gvhvrrtdkv gteaafhpie eymvhveehf qllarrmqvd kkrvylatdd psllkeaktk
      421 ypnyefisdn siswsaglhn rytenslrgv ildihflsqa dflvctfssq vcrvayeimq
      481 tlhpdasanf hslddiyyfg gqnahnqiai ypheprtade ipmepgdiig vagnhwdgys
      541 kgvnrklgrt glypsykvre kietvkypty peaek
//
LOCUS       XP_061012842             575 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-(1,6)-fucosyltransferase isoform X1 [Dama dama].
ACCESSION   XP_061012842
VERSION     XP_061012842.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156859.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..575
                     /product="alpha-(1,6)-fucosyltransferase isoform X1"
                     /calculated_mol_wt=66341
     Region          68..498
                     /region_name="FUT8_N_cat"
                     /note="Alpha-(1,6)-fucosyltransferase N- and catalytic
                     domains; pfam19745"
                     /db_xref="CDD:466170"
     Region          506..560
                     /region_name="SH3_Fut8"
                     /note="Src homology 3 domain of
                     Alpha1,6-fucosyltransferase (Fut8); cd11792"
                     /db_xref="CDD:212726"
     Site            order(511,513,516,520,538..539,554,556..557)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212726"
     CDS             1..575
                     /gene="FUT8"
                     /coded_by="XM_061156859.1:727..2454"
                     /db_xref="GeneID:133066111"
ORIGIN      
        1 mrpwtgswrw imlilfawgt llfyigghlv rdndhpdhss relskilakl erlkqqnedl
       61 rrmaeslrip egpidqgpas griraleeql vkakeqieny kkqtrnglgk dheilrrrie
      121 ngakelwffl qselkklknl egnelqrhad eflsdlghhe rsimtdlyyl sqtdgagdwr
      181 ekeakdltel vqrritylqn pkdcskakkl vcninkgcgy gcqlhhvvyc fmiaygtqrt
      241 lileshnwry atggwetvfr pvsetctdrs gvstghwsge vkdknvqvve lpivdslhpr
      301 ppylplavpe dladrlvrvh gdpavwwvsq fvkylirpqp wlekeieeat kklgfkhpvi
      361 gvhvrrtdkv gteaafhpie eymvhveehf qllarrmqvd kkrvylatdd psllkeaktk
      421 ypnyefisdn siswsaglhn rytenslrgv ildihflsqa dflvctfssq vcrvayeimq
      481 tlhpdasanf hslddiyyfg gqnahnqiai ypheprtade ipmepgdiig vagnhwdgys
      541 kgvnrklgrt glypsykvre kietvkypty peaek
//
LOCUS       XP_061012843             575 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-(1,6)-fucosyltransferase isoform X1 [Dama dama].
ACCESSION   XP_061012843
VERSION     XP_061012843.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156860.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..575
                     /product="alpha-(1,6)-fucosyltransferase isoform X1"
                     /calculated_mol_wt=66341
     Region          68..498
                     /region_name="FUT8_N_cat"
                     /note="Alpha-(1,6)-fucosyltransferase N- and catalytic
                     domains; pfam19745"
                     /db_xref="CDD:466170"
     Region          506..560
                     /region_name="SH3_Fut8"
                     /note="Src homology 3 domain of
                     Alpha1,6-fucosyltransferase (Fut8); cd11792"
                     /db_xref="CDD:212726"
     Site            order(511,513,516,520,538..539,554,556..557)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212726"
     CDS             1..575
                     /gene="FUT8"
                     /coded_by="XM_061156860.1:680..2407"
                     /db_xref="GeneID:133066111"
ORIGIN      
        1 mrpwtgswrw imlilfawgt llfyigghlv rdndhpdhss relskilakl erlkqqnedl
       61 rrmaeslrip egpidqgpas griraleeql vkakeqieny kkqtrnglgk dheilrrrie
      121 ngakelwffl qselkklknl egnelqrhad eflsdlghhe rsimtdlyyl sqtdgagdwr
      181 ekeakdltel vqrritylqn pkdcskakkl vcninkgcgy gcqlhhvvyc fmiaygtqrt
      241 lileshnwry atggwetvfr pvsetctdrs gvstghwsge vkdknvqvve lpivdslhpr
      301 ppylplavpe dladrlvrvh gdpavwwvsq fvkylirpqp wlekeieeat kklgfkhpvi
      361 gvhvrrtdkv gteaafhpie eymvhveehf qllarrmqvd kkrvylatdd psllkeaktk
      421 ypnyefisdn siswsaglhn rytenslrgv ildihflsqa dflvctfssq vcrvayeimq
      481 tlhpdasanf hslddiyyfg gqnahnqiai ypheprtade ipmepgdiig vagnhwdgys
      541 kgvnrklgrt glypsykvre kietvkypty peaek
//
LOCUS       XP_061012844             575 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-(1,6)-fucosyltransferase isoform X1 [Dama dama].
ACCESSION   XP_061012844
VERSION     XP_061012844.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156861.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..575
                     /product="alpha-(1,6)-fucosyltransferase isoform X1"
                     /calculated_mol_wt=66341
     Region          68..498
                     /region_name="FUT8_N_cat"
                     /note="Alpha-(1,6)-fucosyltransferase N- and catalytic
                     domains; pfam19745"
                     /db_xref="CDD:466170"
     Region          506..560
                     /region_name="SH3_Fut8"
                     /note="Src homology 3 domain of
                     Alpha1,6-fucosyltransferase (Fut8); cd11792"
                     /db_xref="CDD:212726"
     Site            order(511,513,516,520,538..539,554,556..557)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212726"
     CDS             1..575
                     /gene="FUT8"
                     /coded_by="XM_061156861.1:539..2266"
                     /db_xref="GeneID:133066111"
ORIGIN      
        1 mrpwtgswrw imlilfawgt llfyigghlv rdndhpdhss relskilakl erlkqqnedl
       61 rrmaeslrip egpidqgpas griraleeql vkakeqieny kkqtrnglgk dheilrrrie
      121 ngakelwffl qselkklknl egnelqrhad eflsdlghhe rsimtdlyyl sqtdgagdwr
      181 ekeakdltel vqrritylqn pkdcskakkl vcninkgcgy gcqlhhvvyc fmiaygtqrt
      241 lileshnwry atggwetvfr pvsetctdrs gvstghwsge vkdknvqvve lpivdslhpr
      301 ppylplavpe dladrlvrvh gdpavwwvsq fvkylirpqp wlekeieeat kklgfkhpvi
      361 gvhvrrtdkv gteaafhpie eymvhveehf qllarrmqvd kkrvylatdd psllkeaktk
      421 ypnyefisdn siswsaglhn rytenslrgv ildihflsqa dflvctfssq vcrvayeimq
      481 tlhpdasanf hslddiyyfg gqnahnqiai ypheprtade ipmepgdiig vagnhwdgys
      541 kgvnrklgrt glypsykvre kietvkypty peaek
//
LOCUS       XP_061012845             575 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-(1,6)-fucosyltransferase isoform X1 [Dama dama].
ACCESSION   XP_061012845
VERSION     XP_061012845.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156862.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..575
                     /product="alpha-(1,6)-fucosyltransferase isoform X1"
                     /calculated_mol_wt=66341
     Region          68..498
                     /region_name="FUT8_N_cat"
                     /note="Alpha-(1,6)-fucosyltransferase N- and catalytic
                     domains; pfam19745"
                     /db_xref="CDD:466170"
     Region          506..560
                     /region_name="SH3_Fut8"
                     /note="Src homology 3 domain of
                     Alpha1,6-fucosyltransferase (Fut8); cd11792"
                     /db_xref="CDD:212726"
     Site            order(511,513,516,520,538..539,554,556..557)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212726"
     CDS             1..575
                     /gene="FUT8"
                     /coded_by="XM_061156862.1:732..2459"
                     /db_xref="GeneID:133066111"
ORIGIN      
        1 mrpwtgswrw imlilfawgt llfyigghlv rdndhpdhss relskilakl erlkqqnedl
       61 rrmaeslrip egpidqgpas griraleeql vkakeqieny kkqtrnglgk dheilrrrie
      121 ngakelwffl qselkklknl egnelqrhad eflsdlghhe rsimtdlyyl sqtdgagdwr
      181 ekeakdltel vqrritylqn pkdcskakkl vcninkgcgy gcqlhhvvyc fmiaygtqrt
      241 lileshnwry atggwetvfr pvsetctdrs gvstghwsge vkdknvqvve lpivdslhpr
      301 ppylplavpe dladrlvrvh gdpavwwvsq fvkylirpqp wlekeieeat kklgfkhpvi
      361 gvhvrrtdkv gteaafhpie eymvhveehf qllarrmqvd kkrvylatdd psllkeaktk
      421 ypnyefisdn siswsaglhn rytenslrgv ildihflsqa dflvctfssq vcrvayeimq
      481 tlhpdasanf hslddiyyfg gqnahnqiai ypheprtade ipmepgdiig vagnhwdgys
      541 kgvnrklgrt glypsykvre kietvkypty peaek
//
LOCUS       XP_061012846             575 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-(1,6)-fucosyltransferase isoform X1 [Dama dama].
ACCESSION   XP_061012846
VERSION     XP_061012846.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156863.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..575
                     /product="alpha-(1,6)-fucosyltransferase isoform X1"
                     /calculated_mol_wt=66341
     Region          68..498
                     /region_name="FUT8_N_cat"
                     /note="Alpha-(1,6)-fucosyltransferase N- and catalytic
                     domains; pfam19745"
                     /db_xref="CDD:466170"
     Region          506..560
                     /region_name="SH3_Fut8"
                     /note="Src homology 3 domain of
                     Alpha1,6-fucosyltransferase (Fut8); cd11792"
                     /db_xref="CDD:212726"
     Site            order(511,513,516,520,538..539,554,556..557)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212726"
     CDS             1..575
                     /gene="FUT8"
                     /coded_by="XM_061156863.1:671..2398"
                     /db_xref="GeneID:133066111"
ORIGIN      
        1 mrpwtgswrw imlilfawgt llfyigghlv rdndhpdhss relskilakl erlkqqnedl
       61 rrmaeslrip egpidqgpas griraleeql vkakeqieny kkqtrnglgk dheilrrrie
      121 ngakelwffl qselkklknl egnelqrhad eflsdlghhe rsimtdlyyl sqtdgagdwr
      181 ekeakdltel vqrritylqn pkdcskakkl vcninkgcgy gcqlhhvvyc fmiaygtqrt
      241 lileshnwry atggwetvfr pvsetctdrs gvstghwsge vkdknvqvve lpivdslhpr
      301 ppylplavpe dladrlvrvh gdpavwwvsq fvkylirpqp wlekeieeat kklgfkhpvi
      361 gvhvrrtdkv gteaafhpie eymvhveehf qllarrmqvd kkrvylatdd psllkeaktk
      421 ypnyefisdn siswsaglhn rytenslrgv ildihflsqa dflvctfssq vcrvayeimq
      481 tlhpdasanf hslddiyyfg gqnahnqiai ypheprtade ipmepgdiig vagnhwdgys
      541 kgvnrklgrt glypsykvre kietvkypty peaek
//
LOCUS       XP_061012847             575 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-(1,6)-fucosyltransferase isoform X1 [Dama dama].
ACCESSION   XP_061012847
VERSION     XP_061012847.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156864.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..575
                     /product="alpha-(1,6)-fucosyltransferase isoform X1"
                     /calculated_mol_wt=66341
     Region          68..498
                     /region_name="FUT8_N_cat"
                     /note="Alpha-(1,6)-fucosyltransferase N- and catalytic
                     domains; pfam19745"
                     /db_xref="CDD:466170"
     Region          506..560
                     /region_name="SH3_Fut8"
                     /note="Src homology 3 domain of
                     Alpha1,6-fucosyltransferase (Fut8); cd11792"
                     /db_xref="CDD:212726"
     Site            order(511,513,516,520,538..539,554,556..557)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212726"
     CDS             1..575
                     /gene="FUT8"
                     /coded_by="XM_061156864.1:456..2183"
                     /db_xref="GeneID:133066111"
ORIGIN      
        1 mrpwtgswrw imlilfawgt llfyigghlv rdndhpdhss relskilakl erlkqqnedl
       61 rrmaeslrip egpidqgpas griraleeql vkakeqieny kkqtrnglgk dheilrrrie
      121 ngakelwffl qselkklknl egnelqrhad eflsdlghhe rsimtdlyyl sqtdgagdwr
      181 ekeakdltel vqrritylqn pkdcskakkl vcninkgcgy gcqlhhvvyc fmiaygtqrt
      241 lileshnwry atggwetvfr pvsetctdrs gvstghwsge vkdknvqvve lpivdslhpr
      301 ppylplavpe dladrlvrvh gdpavwwvsq fvkylirpqp wlekeieeat kklgfkhpvi
      361 gvhvrrtdkv gteaafhpie eymvhveehf qllarrmqvd kkrvylatdd psllkeaktk
      421 ypnyefisdn siswsaglhn rytenslrgv ildihflsqa dflvctfssq vcrvayeimq
      481 tlhpdasanf hslddiyyfg gqnahnqiai ypheprtade ipmepgdiig vagnhwdgys
      541 kgvnrklgrt glypsykvre kietvkypty peaek
//
LOCUS       XP_061012848             520 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-(1,6)-fucosyltransferase isoform X2 [Dama dama].
ACCESSION   XP_061012848
VERSION     XP_061012848.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156865.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..520
                     /product="alpha-(1,6)-fucosyltransferase isoform X2"
                     /calculated_mol_wt=59612
     Region          13..443
                     /region_name="FUT8_N_cat"
                     /note="Alpha-(1,6)-fucosyltransferase N- and catalytic
                     domains; pfam19745"
                     /db_xref="CDD:466170"
     Region          451..505
                     /region_name="SH3_Fut8"
                     /note="Src homology 3 domain of
                     Alpha1,6-fucosyltransferase (Fut8); cd11792"
                     /db_xref="CDD:212726"
     Site            order(456,458,461,465,483..484,499,501..502)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212726"
     CDS             1..520
                     /gene="FUT8"
                     /coded_by="XM_061156865.1:232..1794"
                     /db_xref="GeneID:133066111"
ORIGIN      
        1 mdlqlgnvil scripegpid qgpasgrira leeqlvkake qienykkqtr nglgkdheil
       61 rrriengake lwfflqselk klknlegnel qrhadeflsd lghhersimt dlyylsqtdg
      121 agdwrekeak dltelvqrri tylqnpkdcs kakklvcnin kgcgygcqlh hvvycfmiay
      181 gtqrtliles hnwryatggw etvfrpvset ctdrsgvstg hwsgevkdkn vqvvelpivd
      241 slhprppylp lavpedladr lvrvhgdpav wwvsqfvkyl irpqpwleke ieeatkklgf
      301 khpvigvhvr rtdkvgteaa fhpieeymvh veehfqllar rmqvdkkrvy latddpsllk
      361 eaktkypnye fisdnsisws aglhnryten slrgvildih flsqadflvc tfssqvcrva
      421 yeimqtlhpd asanfhsldd iyyfggqnah nqiaiyphep rtadeipmep gdiigvagnh
      481 wdgyskgvnr klgrtglyps ykvrekietv kyptypeaek
//
LOCUS       XP_061012849             160 aa            linear   MAM 02-DEC-2023
DEFINITION  protein max isoform X1 [Dama dama].
ACCESSION   XP_061012849
VERSION     XP_061012849.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156866.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..160
                     /product="protein max isoform X1"
                     /calculated_mol_wt=18117
     Region          24..92
                     /region_name="bHLHzip_Max"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in protein Max and similar proteins; cd11406"
                     /db_xref="CDD:381412"
     Site            order(25,27..29,31..33,35..36,40,59..60)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381412"
     Site            order(39,42..43,45..46,49..51,61,64..65,68,70..72,74..75,
                     77..78,81,84..85,88..89,91..92)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381412"
     CDS             1..160
                     /gene="MAX"
                     /coded_by="XM_061156866.1:215..697"
                     /db_xref="GeneID:133066114"
ORIGIN      
        1 msdnddieve sdeeqprfqs aadkrahhna lerkrrdhik dsfhslrdsv pslqgekasr
       61 aqildkatey iqymrrknht hqqdiddlkr qnalleqqvr alekarssaq lqtnypssds
      121 slytnakgst isafdggsds ssesepeepq srkklrmeas
//
LOCUS       XP_061012850             151 aa            linear   MAM 02-DEC-2023
DEFINITION  protein max isoform X2 [Dama dama].
ACCESSION   XP_061012850
VERSION     XP_061012850.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156867.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..151
                     /product="protein max isoform X2"
                     /calculated_mol_wt=17044
     Region          15..83
                     /region_name="bHLHzip_Max"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in protein Max and similar proteins; cd11406"
                     /db_xref="CDD:381412"
     Site            order(16,18..20,22..24,26..27,31,50..51)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381412"
     Site            order(30,33..34,36..37,40..42,52,55..56,59,61..63,65..66,
                     68..69,72,75..76,79..80,82..83)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381412"
     CDS             1..151
                     /gene="MAX"
                     /coded_by="XM_061156867.1:216..671"
                     /db_xref="GeneID:133066114"
ORIGIN      
        1 msdnddieve sdadkrahhn alerkrrdhi kdsfhslrds vpslqgekas raqildkate
       61 yiqymrrknh thqqdiddlk rqnalleqqv ralekarssa qlqtnypssd sslytnakgs
      121 tisafdggsd sssesepeep qsrkklrmea s
//
LOCUS       XP_061012852             437 aa            linear   MAM 02-DEC-2023
DEFINITION  protein farnesyltransferase subunit beta [Dama dama].
ACCESSION   XP_061012852
VERSION     XP_061012852.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156869.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..437
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..437
                     /product="protein farnesyltransferase subunit beta"
                     /calculated_mol_wt=48672
     Region          75..373
                     /region_name="FTase"
                     /note="Protein farnesyltransferase (FTase)_like proteins
                     containing the protein prenyltransferase (PTase) domain,
                     beta subunit (alpha 6 - alpha 6 barrel fold). FTases are a
                     subgroup of PTase family of lipid-modifying enzymes.
                     PTases catalyze the...; cd02893"
                     /db_xref="CDD:239223"
     Site            order(95,98..99,102,106,149,151..152,154..155,202,
                     205..206,248,250,254,297,299..300,303,352,361..362)
                     /site_type="active"
                     /note="active site cavity [active]"
                     /db_xref="CDD:239223"
     Site            order(98..99,102,151..152,202,297,352)
                     /site_type="active"
                     /note="peptide binding pocket [active]"
                     /db_xref="CDD:239223"
     Site            order(102,105,202,205,248,250,254,291,294,300,303,361)
                     /site_type="lipid-binding"
                     /note="lipid binding pocket [chemical binding]"
                     /db_xref="CDD:239223"
     Site            order(197,235,245..246,251,275,278,280..281,291..293)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:239223"
     Site            order(297,299,362)
                     /site_type="other"
                     /note="Zn2+ binding site [ion binding]"
                     /db_xref="CDD:239223"
     CDS             1..437
                     /gene="FNTB"
                     /coded_by="XM_061156869.1:78..1391"
                     /db_xref="GeneID:133066115"
ORIGIN      
        1 maspssftyc cppssspvws eplyslrpeh arerlqddsv etvtsieqak veekiqevfs
       61 sykfnhlvpr lilqrekhfh ylkrglrqlt dayecldasr pwlcywilhs lelldepipq
      121 mvatdvcqfl elcqspeggf gggpgqyphl aptyaavnal ciigteeayd vinrekllqy
      181 lyslkqpdgs flmhdggevd vrsaycaasv asltniitpd lfegtaewia rcqnweggig
      241 gvpgmeahgg ytfcglaalv ilkkerslnl ksllqwvtsr qmrfeggfqg rcnklvdgcy
      301 sfwqagllpl lhralhaqgd palsmsrwmf hqqalqeyil mccqcptggl ldkpgksrdf
      361 yhtcyclsgl siaqhfgsga mlhdvvlgvp enalqpthpv ynigpdkviq atmyflhkpv
      421 pgfeehedea saepatd
//
LOCUS       XP_061012853             212 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-related protein Rab-15 isoform X1 [Dama dama].
ACCESSION   XP_061012853
VERSION     XP_061012853.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156870.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..212
                     /product="ras-related protein Rab-15 isoform X1"
                     /calculated_mol_wt=24308
     Region          9..172
                     /region_name="Rab15"
                     /note="Rab GTPase family 15 (Rab15); cd04117"
                     /db_xref="CDD:206698"
     Site            9..10
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206698"
     Site            15..22
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206698"
     Site            order(17..23,33,39..40,66,121..122,124,151..153)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206698"
     Site            order(23..34,38..39)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206698"
     Site            order(33,38..46)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206698"
     Site            order(38,42..49,56,58)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206698"
     Site            40
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206698"
     Site            order(41,43..45,60,62,69..70,73,77,79..82,171)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206698"
     Site            order(41..42,44,62..63,70,72,74..76)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206698"
     Site            41..45
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206698"
     Site            58..62
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206698"
     Site            63..66
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206698"
     Site            order(66,68..78)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206698"
     Site            69..74
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206698"
     Site            77..81
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206698"
     Site            86..91
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206698"
     Site            114..118
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206698"
     Site            121..124
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206698"
     Site            151..153
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206698"
     Site            169..171
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206698"
     CDS             1..212
                     /gene="RAB15"
                     /coded_by="XM_061156870.1:54..692"
                     /db_xref="GeneID:133066116"
ORIGIN      
        1 makqydvlfr llligdsgvg ktcllcrftd nefhsshist igvdfkmkti evdgikvriq
       61 iwdtagqery qtitkqyyrr aqgiflvydi ssersyqhim kwvsdvdeya pegvqkilig
      121 nkadeeqkrq vgreqgqqla reygmdfyet sactnlnike sftrltelvl qahrkelegl
      181 rtranhelal aeleeeegkp egpanssktc wc
//
LOCUS       XP_061012854             166 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-related protein Rab-15 isoform X2 [Dama dama].
ACCESSION   XP_061012854
VERSION     XP_061012854.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156871.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..166
                     /product="ras-related protein Rab-15 isoform X2"
                     /calculated_mol_wt=19149
     Region          <1..126
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            17..20
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            order(19..20,36..37)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     Site            75..78
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            105..107
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     CDS             1..166
                     /gene="RAB15"
                     /coded_by="XM_061156871.1:76..576"
                     /db_xref="GeneID:133066116"
ORIGIN      
        1 mktievdgik vriqiwdtag qeryqtitkq yyrraqgifl vydissersy qhimkwvsdv
       61 deyapegvqk ilignkadee qkrqvgreqg qqlareygmd fyetsactnl nikesftrlt
      121 elvlqahrke leglrtranh elalaeleee egkpegpans sktcwc
//
LOCUS       XP_061012855             186 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-related protein Rab-15 isoform X3 [Dama dama].
ACCESSION   XP_061012855
VERSION     XP_061012855.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156872.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..186
                     /product="ras-related protein Rab-15 isoform X3"
                     /calculated_mol_wt=21208
     Region          9..146
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            15..22
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206648"
     Site            order(17..23,66,95..96,98,125..127)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206648"
     Site            40
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            44..46
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            63..66
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            95..98
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            125..127
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     CDS             1..186
                     /gene="RAB15"
                     /coded_by="XM_061156872.1:54..614"
                     /db_xref="GeneID:133066116"
ORIGIN      
        1 makqydvlfr llligdsgvg ktcllcrftd nefhsshist igvdfkmkti evdgikvriq
       61 iwdtagqery qtitkqyyrr aqyapegvqk ilignkadee qkrqvgreqg qqlareygmd
      121 fyetsactnl nikesftrlt elvlqahrke leglrtranh elalaeleee egkpegpans
      181 sktcwc
//
LOCUS       XP_061012856             166 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-related protein Rab-15 isoform X2 [Dama dama].
ACCESSION   XP_061012856
VERSION     XP_061012856.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156873.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..166
                     /product="ras-related protein Rab-15 isoform X2"
                     /calculated_mol_wt=19149
     Region          <1..126
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            17..20
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            order(19..20,36..37)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     Site            75..78
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            105..107
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     CDS             1..166
                     /gene="RAB15"
                     /coded_by="XM_061156873.1:131..631"
                     /db_xref="GeneID:133066116"
ORIGIN      
        1 mktievdgik vriqiwdtag qeryqtitkq yyrraqgifl vydissersy qhimkwvsdv
       61 deyapegvqk ilignkadee qkrqvgreqg qqlareygmd fyetsactnl nikesftrlt
      121 elvlqahrke leglrtranh elalaeleee egkpegpans sktcwc
//
LOCUS       XP_061012857             190 aa            linear   MAM 02-DEC-2023
DEFINITION  glutathione peroxidase 2 [Dama dama].
ACCESSION   XP_061012857
VERSION     XP_061012857.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156874.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..190
                     /product="glutathione peroxidase 2"
                     /calculated_mol_wt=21890
     Region          7..182
                     /region_name="GSH_Peroxidase"
                     /note="Glutathione (GSH) peroxidase family; tetrameric
                     selenoenzymes that catalyze the reduction of a variety of
                     hydroperoxides including lipid peroxidases, using GSH as a
                     specific electron donor substrate. GSH peroxidase contains
                     one selenocysteine residue per...; cd00340"
                     /db_xref="CDD:238207"
     Site            order(40,74,152)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:238207"
     Site            order(73,76,78,81,84,88)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238207"
     CDS             1..190
                     /gene="GPX2"
                     /coded_by="XM_061156874.1:379..951"
                     /db_xref="GeneID:133066118"
ORIGIN      
        1 mayiaksfyd lsaisldgek vdfntfrgra vlienvaslu gtttrdftql nelqcrfprr
       61 lvvlgfpcnq fghqencqne eilnslkyvr pgggfqptft lvqkcdvngq nehpvfaylk
      121 dklpypyddp fslmtdpkfi iwspvrrsdv swnfekflig pegepfrrys rtfqtiniep
      181 dikrllkvai
//
LOCUS       XP_061012858             139 aa            linear   MAM 02-DEC-2023
DEFINITION  protein Churchill isoform X1 [Dama dama].
ACCESSION   XP_061012858
VERSION     XP_061012858.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156875.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..139
                     /product="protein Churchill isoform X1"
                     /calculated_mol_wt=15929
     Region          28..138
                     /region_name="Churchill"
                     /note="Churchill protein; pfam06573"
                     /db_xref="CDD:461950"
     CDS             1..139
                     /gene="CHURC1"
                     /coded_by="XM_061156875.1:1..420"
                     /db_xref="GeneID:133066119"
ORIGIN      
        1 mrrpslnsre vsysrksrri favngvamcv dcvekeypnr gniclengsf llnftgcavc
       61 skrdfmlitn kslkeedgee ivtydhlckn chhviarhey tfsimdefqe ytmlcllcgk
      121 aedtisilpd dprqmtllf
//
LOCUS       XP_061012859             113 aa            linear   MAM 02-DEC-2023
DEFINITION  protein Churchill isoform X2 [Dama dama].
ACCESSION   XP_061012859
VERSION     XP_061012859.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156876.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..113
                     /product="protein Churchill isoform X2"
                     /calculated_mol_wt=12885
     Region          1..112
                     /region_name="Churchill"
                     /note="Churchill protein; pfam06573"
                     /db_xref="CDD:461950"
     CDS             1..113
                     /gene="CHURC1"
                     /coded_by="XM_061156876.1:78..419"
                     /db_xref="GeneID:133066119"
ORIGIN      
        1 mcvdcvekey pnrgniclen gsfllnftgc avcskrdfml itnkslkeed geeivtydpd
       61 lcknchhvia rheytfsimd efqeytmlcl lcgkaedtis ilpddprqmt llf
//
LOCUS       XP_061012860              68 aa            linear   MAM 02-DEC-2023
DEFINITION  protein Churchill isoform X3 [Dama dama].
ACCESSION   XP_061012860
VERSION     XP_061012860.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156877.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..68
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..68
                     /product="protein Churchill isoform X3"
                     /calculated_mol_wt=7699
     Region          1..>60
                     /region_name="Churchill"
                     /note="Churchill protein; pfam06573"
                     /db_xref="CDD:461950"
     CDS             1..68
                     /gene="CHURC1"
                     /coded_by="XM_061156877.1:78..284"
                     /db_xref="GeneID:133066119"
ORIGIN      
        1 mcvdcvekey pnrgniclen gsfllnftgc avcskrdfml itnkslkeed geeivtydri
       61 yhavsvmw
//
LOCUS       XP_061012861            1239 aa            linear   MAM 02-DEC-2023
DEFINITION  pleckstrin homology domain-containing family G member 3 isoform X1
            [Dama dama].
ACCESSION   XP_061012861
VERSION     XP_061012861.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156878.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1239
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1239
                     /product="pleckstrin homology domain-containing family G
                     member 3 isoform X1"
                     /calculated_mol_wt=136612
     Region          94..267
                     /region_name="RhoGEF"
                     /note="RhoGEF domain; pfam00621"
                     /db_xref="CDD:459876"
     Region          250..393
                     /region_name="PH_PLEKHG1_G2_G3"
                     /note="Pleckstrin homology domain-containing family G
                     members 1, 2, and 3 pleckstrin homology (PH) domain;
                     cd13243"
                     /db_xref="CDD:270063"
     Region          <789..1234
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     CDS             1..1239
                     /gene="PLEKHG3"
                     /coded_by="XM_061156878.1:231..3950"
                     /db_xref="GeneID:133066122"
ORIGIN      
        1 mpvsaslhqn gsqerpaslt sttsssgssr dsrgameeps gsealaenge gspsgqhlpn
       61 snnssgwlrg slspfskrtr pvapadkfgy lgrvvreive tertyvrdlr sivedyllki
      121 idtpgllnpe qvsalfgnie siyalnsqll rdldscnsdp vavascfver sqefdiytqy
      181 cnnypnsvaa ltecmqdkqq akffrdqqdl lqhslplgsy llkpvqrilk yhlllqeiak
      241 hfdeeedgfe vvedaidtmt cvawyindmk rrhehavrlq eiqslllnwt gpdlttygel
      301 vlegtfrvhr vrnektfflf dkvllitkkr gghfvykghi pcsslmlies treslcftvt
      361 hykhgkqqyn iqaktveekr kwthhikrli ldnhhttipq kakeailemd syypnryrhs
      421 perlkkgsqd dvfthmhqgr rqseptrhlf rqlsekaraa rvkhagsvgt lldfgqppca
      481 rglqseaega aqeeqeegke rresedsksc grtrsrsptp eekclnfesv tslpevepdt
      541 esgteqevfa avegpsteem psdteapevl emqldphqll lgleppddma efmvaested
      601 pkalssedee eevgaphepe sllppsvldq asviaelfvs svsrrsslal edgkssgfgt
      661 prltsrsssm vsledgekgp aprgsttdsl gsqllpeadl gvrvaaesep svngmeapgp
      721 gcpaepdrss cpkesklssq drqlldrikr yyenaehqda gfsvrrresl sfipkglvrn
      781 svsrinslrk pdpepqaplg pkrqvgsraa lfdcpgsgqa gagdpapitd aefrpssemv
      841 kiwegmespk gsppkgpgqg qangfdlhep lfileehela aiteesvaas pesasptepr
      901 spthlarelk elvrelssda qgklvtplhp hilqlshvmd shvservknr vyqlarqysl
      961 riksrsvmar pplqwekeas tiplvqeevg apsggtgvsk pgpplsnheq pavqehsppr
     1021 pgssmemspr hisfsssats prttppgawh gprspfdtet fnwpdvrelc skyasrdeal
     1081 qtkggwpskv pvnrsrslpe nmrepqlaps grlgrcsslk arrapvspea aqpqplaesp
     1141 psepdrgeal hvtadltled nrrmiimekg plpgsatgle aasgqgpssa aaqtgkdqel
     1201 qesaeyrpke egprdpadqs qqgrvrnlre kfqalnsig
//
LOCUS       XP_061012862            1239 aa            linear   MAM 02-DEC-2023
DEFINITION  pleckstrin homology domain-containing family G member 3 isoform X1
            [Dama dama].
ACCESSION   XP_061012862
VERSION     XP_061012862.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156879.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1239
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1239
                     /product="pleckstrin homology domain-containing family G
                     member 3 isoform X1"
                     /calculated_mol_wt=136612
     Region          94..267
                     /region_name="RhoGEF"
                     /note="RhoGEF domain; pfam00621"
                     /db_xref="CDD:459876"
     Region          250..393
                     /region_name="PH_PLEKHG1_G2_G3"
                     /note="Pleckstrin homology domain-containing family G
                     members 1, 2, and 3 pleckstrin homology (PH) domain;
                     cd13243"
                     /db_xref="CDD:270063"
     Region          <789..1234
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     CDS             1..1239
                     /gene="PLEKHG3"
                     /coded_by="XM_061156879.1:253..3972"
                     /db_xref="GeneID:133066122"
ORIGIN      
        1 mpvsaslhqn gsqerpaslt sttsssgssr dsrgameeps gsealaenge gspsgqhlpn
       61 snnssgwlrg slspfskrtr pvapadkfgy lgrvvreive tertyvrdlr sivedyllki
      121 idtpgllnpe qvsalfgnie siyalnsqll rdldscnsdp vavascfver sqefdiytqy
      181 cnnypnsvaa ltecmqdkqq akffrdqqdl lqhslplgsy llkpvqrilk yhlllqeiak
      241 hfdeeedgfe vvedaidtmt cvawyindmk rrhehavrlq eiqslllnwt gpdlttygel
      301 vlegtfrvhr vrnektfflf dkvllitkkr gghfvykghi pcsslmlies treslcftvt
      361 hykhgkqqyn iqaktveekr kwthhikrli ldnhhttipq kakeailemd syypnryrhs
      421 perlkkgsqd dvfthmhqgr rqseptrhlf rqlsekaraa rvkhagsvgt lldfgqppca
      481 rglqseaega aqeeqeegke rresedsksc grtrsrsptp eekclnfesv tslpevepdt
      541 esgteqevfa avegpsteem psdteapevl emqldphqll lgleppddma efmvaested
      601 pkalssedee eevgaphepe sllppsvldq asviaelfvs svsrrsslal edgkssgfgt
      661 prltsrsssm vsledgekgp aprgsttdsl gsqllpeadl gvrvaaesep svngmeapgp
      721 gcpaepdrss cpkesklssq drqlldrikr yyenaehqda gfsvrrresl sfipkglvrn
      781 svsrinslrk pdpepqaplg pkrqvgsraa lfdcpgsgqa gagdpapitd aefrpssemv
      841 kiwegmespk gsppkgpgqg qangfdlhep lfileehela aiteesvaas pesasptepr
      901 spthlarelk elvrelssda qgklvtplhp hilqlshvmd shvservknr vyqlarqysl
      961 riksrsvmar pplqwekeas tiplvqeevg apsggtgvsk pgpplsnheq pavqehsppr
     1021 pgssmemspr hisfsssats prttppgawh gprspfdtet fnwpdvrelc skyasrdeal
     1081 qtkggwpskv pvnrsrslpe nmrepqlaps grlgrcsslk arrapvspea aqpqplaesp
     1141 psepdrgeal hvtadltled nrrmiimekg plpgsatgle aasgqgpssa aaqtgkdqel
     1201 qesaeyrpke egprdpadqs qqgrvrnlre kfqalnsig
//
LOCUS       XP_061012863            1205 aa            linear   MAM 02-DEC-2023
DEFINITION  pleckstrin homology domain-containing family G member 3 isoform X2
            [Dama dama].
ACCESSION   XP_061012863
VERSION     XP_061012863.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156880.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1205
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1205
                     /product="pleckstrin homology domain-containing family G
                     member 3 isoform X2"
                     /calculated_mol_wt=133117
     Region          94..267
                     /region_name="RhoGEF"
                     /note="RhoGEF domain; pfam00621"
                     /db_xref="CDD:459876"
     Region          250..393
                     /region_name="PH_PLEKHG1_G2_G3"
                     /note="Pleckstrin homology domain-containing family G
                     members 1, 2, and 3 pleckstrin homology (PH) domain;
                     cd13243"
                     /db_xref="CDD:270063"
     Region          <755..1200
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     CDS             1..1205
                     /gene="PLEKHG3"
                     /coded_by="XM_061156880.1:231..3848"
                     /db_xref="GeneID:133066122"
ORIGIN      
        1 mpvsaslhqn gsqerpaslt sttsssgssr dsrgameeps gsealaenge gspsgqhlpn
       61 snnssgwlrg slspfskrtr pvapadkfgy lgrvvreive tertyvrdlr sivedyllki
      121 idtpgllnpe qvsalfgnie siyalnsqll rdldscnsdp vavascfver sqefdiytqy
      181 cnnypnsvaa ltecmqdkqq akffrdqqdl lqhslplgsy llkpvqrilk yhlllqeiak
      241 hfdeeedgfe vvedaidtmt cvawyindmk rrhehavrlq eiqslllnwt gpdlttygel
      301 vlegtfrvhr vrnektfflf dkvllitkkr gghfvykghi pcsslmlies treslcftvt
      361 hykhgkqqyn iqaktveekr kwthhikrli ldnhhttipq kakeailemd syypnryrhs
      421 perlkkgsqd dvfthmhqgr rqseptrhlf rqlsekaraa rvkgkerres edskscgrtr
      481 srsptpeekc lnfesvtslp evepdtesgt eqevfaaveg psteempsdt eapevlemql
      541 dphqlllgle ppddmaefmv aestedpkal ssedeeeevg aphepesllp psvldqasvi
      601 aelfvssvsr rsslaledgk ssgfgtprlt srsssmvsle dgekgpaprg sttdslgsql
      661 lpeadlgvrv aaesepsvng meapgpgcpa epdrsscpke sklssqdrql ldrikryyen
      721 aehqdagfsv rrreslsfip kglvrnsvsr inslrkpdpe pqaplgpkrq vgsraalfdc
      781 pgsgqagagd papitdaefr pssemvkiwe gmespkgspp kgpgqgqang fdlheplfil
      841 eehelaaite esvaaspesa spteprspth larelkelvr elssdaqgkl vtplhphilq
      901 lshvmdshvs ervknrvyql arqyslriks rsvmarpplq wekeastipl vqeevgapsg
      961 gtgvskpgpp lsnheqpavq ehspprpgss memsprhisf sssatsprtt ppgawhgprs
     1021 pfdtetfnwp dvrelcskya srdealqtkg gwpskvpvnr srslpenmre pqlapsgrlg
     1081 rcsslkarra pvspeaaqpq plaesppsep drgealhvta dltlednrrm iimekgplpg
     1141 satgleaasg qgpssaaaqt gkdqelqesa eyrpkeegpr dpadqsqqgr vrnlrekfqa
     1201 lnsig
//
LOCUS       XP_061012864            1167 aa            linear   MAM 02-DEC-2023
DEFINITION  pleckstrin homology domain-containing family G member 3 isoform X3
            [Dama dama].
ACCESSION   XP_061012864
VERSION     XP_061012864.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156881.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1167
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1167
                     /product="pleckstrin homology domain-containing family G
                     member 3 isoform X3"
                     /calculated_mol_wt=128822
     Region          94..267
                     /region_name="RhoGEF"
                     /note="RhoGEF domain; pfam00621"
                     /db_xref="CDD:459876"
     Region          250..393
                     /region_name="PH_PLEKHG1_G2_G3"
                     /note="Pleckstrin homology domain-containing family G
                     members 1, 2, and 3 pleckstrin homology (PH) domain;
                     cd13243"
                     /db_xref="CDD:270063"
     Region          <717..1162
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     CDS             1..1167
                     /gene="PLEKHG3"
                     /coded_by="XM_061156881.1:231..3734"
                     /db_xref="GeneID:133066122"
ORIGIN      
        1 mpvsaslhqn gsqerpaslt sttsssgssr dsrgameeps gsealaenge gspsgqhlpn
       61 snnssgwlrg slspfskrtr pvapadkfgy lgrvvreive tertyvrdlr sivedyllki
      121 idtpgllnpe qvsalfgnie siyalnsqll rdldscnsdp vavascfver sqefdiytqy
      181 cnnypnsvaa ltecmqdkqq akffrdqqdl lqhslplgsy llkpvqrilk yhlllqeiak
      241 hfdeeedgfe vvedaidtmt cvawyindmk rrhehavrlq eiqslllnwt gpdlttygel
      301 vlegtfrvhr vrnektfflf dkvllitkkr gghfvykghi pcsslmlies treslcftvt
      361 hykhgkqqyn iqaktveekr kwthhikrli ldnhhttipq kakeailemd syypnryrhs
      421 perlkkgsqd dvfthmhqgr rqseptrhlf rqlsekaraa rvkvepdtes gteqevfaav
      481 egpsteemps dteapevlem qldphqlllg leppddmaef mvaestedpk alssedeeee
      541 vgaphepesl lppsvldqas viaelfvssv srrsslaled gkssgfgtpr ltsrsssmvs
      601 ledgekgpap rgsttdslgs qllpeadlgv rvaaesepsv ngmeapgpgc paepdrsscp
      661 kesklssqdr qlldrikryy enaehqdagf svrrreslsf ipkglvrnsv srinslrkpd
      721 pepqaplgpk rqvgsraalf dcpgsgqaga gdpapitdae frpssemvki wegmespkgs
      781 ppkgpgqgqa ngfdlheplf ileehelaai teesvaaspe saspteprsp thlarelkel
      841 vrelssdaqg klvtplhphi lqlshvmdsh vservknrvy qlarqyslri ksrsvmarpp
      901 lqwekeasti plvqeevgap sggtgvskpg pplsnheqpa vqehspprpg ssmemsprhi
      961 sfsssatspr ttppgawhgp rspfdtetfn wpdvrelcsk yasrdealqt kggwpskvpv
     1021 nrsrslpenm repqlapsgr lgrcsslkar rapvspeaaq pqplaespps epdrgealhv
     1081 tadltlednr rmiimekgpl pgsatgleaa sgqgpssaaa qtgkdqelqe saeyrpkeeg
     1141 prdpadqsqq grvrnlrekf qalnsig
//
LOCUS       XP_061012865             404 aa            linear   MAM 02-DEC-2023
DEFINITION  protein phosphatase 1 regulatory subunit 36 [Dama dama].
ACCESSION   XP_061012865
VERSION     XP_061012865.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156882.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..404
                     /product="protein phosphatase 1 regulatory subunit 36"
                     /calculated_mol_wt=47336
     Region          45..395
                     /region_name="PPPI_inhib"
                     /note="Protein phosphatase 1 inhibitor; pfam14895"
                     /db_xref="CDD:464358"
     CDS             1..404
                     /gene="PPP1R36"
                     /coded_by="XM_061156882.1:28..1242"
                     /db_xref="GeneID:133066123"
ORIGIN      
        1 mstvpefysr rrrwdshsaq sdqlglrlgm wywkdetktl efrsftpave lkergkkgka
       61 vhfveidgpa sdrltdkrfa lrddksprgl ekrsqqgnvt lhdakfvall llqdtempri
      121 csfttfmrnk nldnflmall yylyyyleki sqekkpksym iglvekkeme miiskleaaq
      181 kylaqkycvl vlglgmpdkh hmscgkgkis dtqkdwkffe sfytfctyva wivfrrqhft
      241 eieeeigrlf rsnmfniprr kredeesgge kkrmtfvqfr rmmakrpaik kaihmrspvm
      301 stllpslrek aqnvsekkyr qigtkfpaqm qepretldsl hmpivgilge prcqfnphtl
      361 ipldpeesmk sgkssslier nnlriqdtld lvmrtlssqt tfpk
//
LOCUS       XP_061012866             428 aa            linear   MAM 02-DEC-2023
DEFINITION  A-kinase anchor protein 5 [Dama dama].
ACCESSION   XP_061012866
VERSION     XP_061012866.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156883.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..428
                     /product="A-kinase anchor protein 5"
                     /calculated_mol_wt=47661
     Region          75..102
                     /region_name="WSK"
                     /note="WSK motif; pfam03832"
                     /db_xref="CDD:461069"
     CDS             1..428
                     /gene="AKAP5"
                     /coded_by="XM_061156883.1:399..1685"
                     /db_xref="GeneID:133066124"
ORIGIN      
        1 meitvseiqv eskdetrsae vrpqderqee kasmlcfkrr kkaakamkae asskaadaar
       61 kcppeagasd qpqhpggawa sikrlvtrrk rsesskqqkp feaklqsein aedanpskkk
      121 aksrfkipci kfskgekrsn hskiiedsdr svkvqeaenl vtktltqsdd qateskspqd
      181 vredvsqkgd hevcesnvnd sitspgekvi sveleldmgh saiqtgtlil ekdtemleek
      241 qsiqpqqvsp leasdteqel pvgsevppsp avpdrqilee arhgvlesgp dwkehesrei
      301 vveeskpkdt elsqesdfqe neitaekpkp eeskrmepia iiitdteise fdvkksknvp
      361 kpflisiene qvgvfandsd fegrtseqye tllietassl vknaiqlsie qlvnemasdd
      421 ntinnrlq
//
LOCUS       XP_061012867             940 aa            linear   MAM 02-DEC-2023
DEFINITION  C-1-tetrahydrofolate synthase, cytoplasmic isoform X1 [Dama dama].
ACCESSION   XP_061012867
VERSION     XP_061012867.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156884.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..940
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..940
                     /product="C-1-tetrahydrofolate synthase, cytoplasmic
                     isoform X1"
                     /calculated_mol_wt=101826
     Region          3..298
                     /region_name="FolD"
                     /note="5,10-methylene-tetrahydrofolate
                     dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
                     [Coenzyme transport and metabolism]; COG0190"
                     /db_xref="CDD:439960"
     Region          314..940
                     /region_name="PLN02759"
                     /note="Formate--tetrahydrofolate ligase"
                     /db_xref="CDD:178359"
     Site            order(347,350..355,363,419,423,445..446,452..453,456,
                     459..460,463..464,466..467,537,539,541,543..552,566,584,
                     588,610..612,614..615,618..619,621,918..920,924..925,
                     927..929,936)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:349750"
     Site            order(389..393,415,429,431,675..676,762..765,793)
                     /site_type="active"
                     /db_xref="CDD:349750"
     CDS             1..940
                     /gene="MTHFD1"
                     /coded_by="XM_061156884.1:93..2915"
                     /db_xref="GeneID:133066125"
ORIGIN      
        1 mapaeilngk vvsaqirerl knqviqmkee vpgftpglai lqvgnrddsn lyinvklkaa
       61 eecsflqigi kamhiklprt atesevlkci tslnedltvh gfivqlplds enpintetlv
      121 naispekdvd glnsisagkl argdlnncfi pctpkgclel iketgvqiag rhavvvgrsk
      181 ivgapmhdll lwnhatvttc hsktanlnee iskgdilvva tgqpemvkge wikpgaivid
      241 cginyvtddt kpngkkivgd veyreakera sfitpvpggv gpmtvamlmq stvesakrfl
      301 ekfkpgkwii qynklnlktp vpsdidisrs ykpkpignla reiglraeev elygetkakv
      361 llsalerlkh qpdgkyvvvt gitptplgeg kstttiglvq algahlhqnv facvrqpsqg
      421 ptfgikggaa gggysqvipm eefnlhltgd ihaitaannl vaaaidarmf heetqtdkal
      481 fnrlvpsvng vrkfsdiqvr rlrrlgiekt dpatltdeei nrfarldidp etitwqrvld
      541 tndrflrkit igqsptekgh srtaqfdisv aseimavlal tssledmrdr lgkmvvassk
      601 kgepistedl gvsgaltvlm kdaikpnlmq tlegtpvfvh agpfaniahg nssiiadria
      661 lklvgpegfv vteagfgadi gmekffnikc rysglrphvv alvatvralk mhgggptvta
      721 glplpkayie edlelvekgf snlkkqiena rmfgvpvvva vnafktdtea eldlvsrlak
      781 ehgafdavkc thwaeggkga lalaeavqra aaapssfqll ydlklpvedk iriiaqkiyg
      841 addiellpea qhkaevytkq gfgnlpicma kthlslshnp elkgvptgfi lpirdirasv
      901 gagflyplvg tmstmpglpt rpcfydidld peteqvnglf
//
LOCUS       XP_061012868             935 aa            linear   MAM 02-DEC-2023
DEFINITION  C-1-tetrahydrofolate synthase, cytoplasmic isoform X2 [Dama dama].
ACCESSION   XP_061012868
VERSION     XP_061012868.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156885.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..935
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..935
                     /product="C-1-tetrahydrofolate synthase, cytoplasmic
                     isoform X2"
                     /calculated_mol_wt=101247
     Region          3..293
                     /region_name="FolD"
                     /note="5,10-methylene-tetrahydrofolate
                     dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
                     [Coenzyme transport and metabolism]; COG0190"
                     /db_xref="CDD:439960"
     Region          309..935
                     /region_name="PLN02759"
                     /note="Formate--tetrahydrofolate ligase"
                     /db_xref="CDD:178359"
     Site            order(342,345..350,358,414,418,440..441,447..448,451,
                     454..455,458..459,461..462,532,534,536,538..547,561,579,
                     583,605..607,609..610,613..614,616,913..915,919..920,
                     922..924,931)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:349750"
     Site            order(384..388,410,424,426,670..671,757..760,788)
                     /site_type="active"
                     /db_xref="CDD:349750"
     CDS             1..935
                     /gene="MTHFD1"
                     /coded_by="XM_061156885.1:93..2900"
                     /db_xref="GeneID:133066125"
ORIGIN      
        1 mapaeilngk vvsaqirerl knqviqmkee vpgftpglai lqvgnrddsn lyinvklkaa
       61 eeigikamhi klprtatese vlkcitslne dltvhgfivq lpldsenpin tetlvnaisp
      121 ekdvdglnsi sagklargdl nncfipctpk gcleliketg vqiagrhavv vgrskivgap
      181 mhdlllwnha tvttchskta nlneeiskgd ilvvatgqpe mvkgewikpg aividcginy
      241 vtddtkpngk kivgdveyre akerasfitp vpggvgpmtv amlmqstves akrflekfkp
      301 gkwiiqynkl nlktpvpsdi disrsykpkp ignlareigl raeevelyge tkakvllsal
      361 erlkhqpdgk yvvvtgitpt plgegksttt iglvqalgah lhqnvfacvr qpsqgptfgi
      421 kggaagggys qvipmeefnl hltgdihait aannlvaaai darmfheetq tdkalfnrlv
      481 psvngvrkfs diqvrrlrrl giektdpatl tdeeinrfar ldidpetitw qrvldtndrf
      541 lrkitigqsp tekghsrtaq fdisvaseim avlaltssle dmrdrlgkmv vasskkgepi
      601 stedlgvsga ltvlmkdaik pnlmqtlegt pvfvhagpfa niahgnssii adrialklvg
      661 pegfvvteag fgadigmekf fnikcrysgl rphvvalvat vralkmhggg ptvtaglplp
      721 kayieedlel vekgfsnlkk qienarmfgv pvvvavnafk tdteaeldlv srlakehgaf
      781 davkcthwae ggkgalalae avqraaaaps sfqllydlkl pvedkiriia qkiygaddie
      841 llpeaqhkae vytkqgfgnl picmakthls lshnpelkgv ptgfilpird irasvgagfl
      901 yplvgtmstm pglptrpcfy didldpeteq vnglf
//
LOCUS       XP_061012869             917 aa            linear   MAM 02-DEC-2023
DEFINITION  C-1-tetrahydrofolate synthase, cytoplasmic isoform X3 [Dama dama].
ACCESSION   XP_061012869
VERSION     XP_061012869.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156886.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..917
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..917
                     /product="C-1-tetrahydrofolate synthase, cytoplasmic
                     isoform X3"
                     /calculated_mol_wt=99270
     Region          3..275
                     /region_name="FolD"
                     /note="5,10-methylene-tetrahydrofolate
                     dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
                     [Coenzyme transport and metabolism]; COG0190"
                     /db_xref="CDD:439960"
     Region          291..917
                     /region_name="PLN02759"
                     /note="Formate--tetrahydrofolate ligase"
                     /db_xref="CDD:178359"
     Site            order(324,327..332,340,396,400,422..423,429..430,433,
                     436..437,440..441,443..444,514,516,518,520..529,543,561,
                     565,587..589,591..592,595..596,598,895..897,901..902,
                     904..906,913)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:349750"
     Site            order(366..370,392,406,408,652..653,739..742,770)
                     /site_type="active"
                     /db_xref="CDD:349750"
     CDS             1..917
                     /gene="MTHFD1"
                     /coded_by="XM_061156886.1:93..2846"
                     /db_xref="GeneID:133066125"
ORIGIN      
        1 mapaeilngk vvsaqirerl knqviqmkee vpgftpglai lqvgnrddsn lyinvklkaa
       61 eevlkcitsl nedltvhgfi vqlpldsenp intetlvnai spekdvdgln sisagklarg
      121 dlnncfipct pkgclelike tgvqiagrha vvvgrskivg apmhdlllwn hatvttchsk
      181 tanlneeisk gdilvvatgq pemvkgewik pgaividcgi nyvtddtkpn gkkivgdvey
      241 reakerasfi tpvpggvgpm tvamlmqstv esakrflekf kpgkwiiqyn klnlktpvps
      301 didisrsykp kpignlarei glraeevely getkakvlls alerlkhqpd gkyvvvtgit
      361 ptplgegkst ttiglvqalg ahlhqnvfac vrqpsqgptf gikggaaggg ysqvipmeef
      421 nlhltgdiha itaannlvaa aidarmfhee tqtdkalfnr lvpsvngvrk fsdiqvrrlr
      481 rlgiektdpa tltdeeinrf arldidpeti twqrvldtnd rflrkitigq sptekghsrt
      541 aqfdisvase imavlaltss ledmrdrlgk mvvasskkge pistedlgvs galtvlmkda
      601 ikpnlmqtle gtpvfvhagp faniahgnss iiadrialkl vgpegfvvte agfgadigme
      661 kffnikcrys glrphvvalv atvralkmhg ggptvtaglp lpkayieedl elvekgfsnl
      721 kkqienarmf gvpvvvavna fktdteaeld lvsrlakehg afdavkcthw aeggkgalal
      781 aeavqraaaa pssfqllydl klpvedkiri iaqkiygadd iellpeaqhk aevytkqgfg
      841 nlpicmakth lslshnpelk gvptgfilpi rdirasvgag flyplvgtms tmpglptrpc
      901 fydidldpet eqvnglf
//
LOCUS       XP_061012870             712 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger and BTB domain-containing protein 1 isoform X1 [Dama
            dama].
ACCESSION   XP_061012870
VERSION     XP_061012870.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156887.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..712
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..712
                     /product="zinc finger and BTB domain-containing protein 1
                     isoform X1"
                     /calculated_mol_wt=81846
     Region          3..116
                     /region_name="BTB_POZ_ZBTB1"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in zinc finger and
                     BTB domain-containing protein 1 (ZBTB1); cd18192"
                     /db_xref="CDD:349501"
     Region          535..573
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          579..599
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(584,586,588,590..591,594..595,598,612,614,618..619,
                     622..623,626,640,643,645,647..648,650..651,654)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          607..627
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(607,610,623,627)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          635..655
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          663..683
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          687..708
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     CDS             1..712
                     /gene="ZBTB1"
                     /coded_by="XM_061156887.1:704..2842"
                     /db_xref="GeneID:133066126"
ORIGIN      
        1 makpshssyv lqqlnnqrew gflcdcciai ddiyfqahka vlaacssyfr mffmnhqhst
       61 aqlnlsnmki saecfdlilq fmylgkimta pssfeqfkva mnylqlynvp dclediqdad
      121 cssskcsssa sskqnskmif gvrmyedtva rngseanrwc aepsstvntp hnrepdeesl
      181 qlgnfpeplf dvckkssvsk lstpkervsr rfgrsftcds cgfgfscekl ldehvltctn
      241 rhsyqntrsy hrlvdirdgk dsnikaefse kdssktfsaq tdkyrgdtsq aaddsasttg
      301 srksstvese laseeksraa erkriiikme pediptdelk dfniikvtdk dcnestdnde
      361 ledeaeepfy ryyveedvsi kksgrktlkp rmsinaderg glenmrppnn spvqedtena
      421 scelcgltit eedlsshyla khienicacg kcgqilvkgr qlqehaqrcg epqdltmngl
      481 gnaeekmdme enpdeqseir dmfvemlddf rdnhfqinsi qkkqlfkhsa cpfrcpncgq
      541 rfetenlvve hmsscldqem fksaimeene rdhrrkhfcn lcgkgfyqrc hlrehytvht
      601 kekqfvcqtc gkqflrerql rlhndmhkgm aryvcsicdq gnfrkhdhvr hmishlsage
      661 ticqvcfqif pnneqleqhm dihlytcgic gakfnlrkdm rshynakhlk rt
//
LOCUS       XP_061012871             712 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger and BTB domain-containing protein 1 isoform X1 [Dama
            dama].
ACCESSION   XP_061012871
VERSION     XP_061012871.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156888.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..712
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..712
                     /product="zinc finger and BTB domain-containing protein 1
                     isoform X1"
                     /calculated_mol_wt=81846
     Region          3..116
                     /region_name="BTB_POZ_ZBTB1"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in zinc finger and
                     BTB domain-containing protein 1 (ZBTB1); cd18192"
                     /db_xref="CDD:349501"
     Region          535..573
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          579..599
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(584,586,588,590..591,594..595,598,612,614,618..619,
                     622..623,626,640,643,645,647..648,650..651,654)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          607..627
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(607,610,623,627)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          635..655
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          663..683
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          687..708
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     CDS             1..712
                     /gene="ZBTB1"
                     /coded_by="XM_061156888.1:773..2911"
                     /db_xref="GeneID:133066126"
ORIGIN      
        1 makpshssyv lqqlnnqrew gflcdcciai ddiyfqahka vlaacssyfr mffmnhqhst
       61 aqlnlsnmki saecfdlilq fmylgkimta pssfeqfkva mnylqlynvp dclediqdad
      121 cssskcsssa sskqnskmif gvrmyedtva rngseanrwc aepsstvntp hnrepdeesl
      181 qlgnfpeplf dvckkssvsk lstpkervsr rfgrsftcds cgfgfscekl ldehvltctn
      241 rhsyqntrsy hrlvdirdgk dsnikaefse kdssktfsaq tdkyrgdtsq aaddsasttg
      301 srksstvese laseeksraa erkriiikme pediptdelk dfniikvtdk dcnestdnde
      361 ledeaeepfy ryyveedvsi kksgrktlkp rmsinaderg glenmrppnn spvqedtena
      421 scelcgltit eedlsshyla khienicacg kcgqilvkgr qlqehaqrcg epqdltmngl
      481 gnaeekmdme enpdeqseir dmfvemlddf rdnhfqinsi qkkqlfkhsa cpfrcpncgq
      541 rfetenlvve hmsscldqem fksaimeene rdhrrkhfcn lcgkgfyqrc hlrehytvht
      601 kekqfvcqtc gkqflrerql rlhndmhkgm aryvcsicdq gnfrkhdhvr hmishlsage
      661 ticqvcfqif pnneqleqhm dihlytcgic gakfnlrkdm rshynakhlk rt
//
LOCUS       XP_061012872             643 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger and BTB domain-containing protein 1 isoform X2 [Dama
            dama].
ACCESSION   XP_061012872
VERSION     XP_061012872.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156889.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..643
                     /product="zinc finger and BTB domain-containing protein 1
                     isoform X2"
                     /calculated_mol_wt=73512
     Region          3..116
                     /region_name="BTB_POZ_ZBTB1"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in zinc finger and
                     BTB domain-containing protein 1 (ZBTB1); cd18192"
                     /db_xref="CDD:349501"
     Region          535..573
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(540,542,544,546..547,550..551,572,584,586,590..591,
                     594..595,598,612,614,616,618..619,622..623,626)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          579..599
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(579,582,595,599)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          607..627
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..643
                     /gene="ZBTB1"
                     /coded_by="XM_061156889.1:706..2637"
                     /db_xref="GeneID:133066126"
ORIGIN      
        1 makpshssyv lqqlnnqrew gflcdcciai ddiyfqahka vlaacssyfr mffmnhqhst
       61 aqlnlsnmki saecfdlilq fmylgkimta pssfeqfkva mnylqlynvp dclediqdad
      121 cssskcsssa sskqnskmif gvrmyedtva rngseanrwc aepsstvntp hnrepdeesl
      181 qlgnfpeplf dvckkssvsk lstpkervsr rfgrsftcds cgfgfscekl ldehvltctn
      241 rhsyqntrsy hrlvdirdgk dsnikaefse kdssktfsaq tdkyrgdtsq aaddsasttg
      301 srksstvese laseeksraa erkriiikme pediptdelk dfniikvtdk dcnestdnde
      361 ledeaeepfy ryyveedvsi kksgrktlkp rmsinaderg glenmrppnn spvqedtena
      421 scelcgltit eedlsshyla khienicacg kcgqilvkgr qlqehaqrcg epqdltmngl
      481 gnaeekmdme enpdeqseir dmfvemlddf rdnhfqinsi qkkqlfkhsa cpfrcpncgq
      541 rfetenlvve hmsscldqem fksaimeene rdhrrkhfcn lcgkgfyqrc hlrehytvht
      601 kekqfvcqtc gkqflrerql rlhndmhkgm asgqigpskp lek
//
LOCUS       XP_061012873             636 aa            linear   MAM 02-DEC-2023
DEFINITION  heat shock-related 70 kDa protein 2 [Dama dama].
ACCESSION   XP_061012873
VERSION     XP_061012873.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156890.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..636
                     /product="heat shock-related 70 kDa protein 2"
                     /calculated_mol_wt=69678
     Region          2..615
                     /region_name="PTZ00009"
                     /note="heat shock 70 kDa protein; Provisional"
                     /db_xref="CDD:240227"
     CDS             1..636
                     /gene="HSPA2"
                     /coded_by="XM_061156890.1:256..2166"
                     /db_xref="GeneID:133066128"
ORIGIN      
        1 msargpaigi dlgttyscvg vfqhgkveii andqgnrttp syvaftdter ligdaaknqv
       61 amnptntifd akrligrkfe datvqsdmkh wpfrvvsegg kpkvqveykg eiktffpeei
      121 ssmvltkmke iaeaylggkv qsavitvpay fndsqrqatk dagtitglnv lriineptaa
      181 aiaygldkkg caggeknvli fdlgggtfdv siltiedgif evkstagdth lggedfdnrm
      241 vshlaeefkr khkkdiapnk ravrrlrtac erakrtlsss tqasieidsl yegvdfytsi
      301 trarfeelna dlfrgtlepv ekalrdakld kgqiqeivlv ggstripkiq kllqdffngk
      361 elnksinpde avaygaavqa ailigdksen vqdlllldvt plslgietag gvmtplikrn
      421 ttiptkqtqt fttysdnqss vlvqvyeger amtkdnnllg kfdltgippa prgvpqievt
      481 fdidangiln vtaadkstgk enkititndk grlskddidr mvqeaeryks edeanrdrva
      541 aknavesyty nikqtvedek lrgkisdqdk nkildkcqev inwldrnqma ekdeyehkqk
      601 elervcnpii sklyqggpgg gggsgasggp tieevd
//
LOCUS       XP_061012874             585 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 170-like isoform X1 [Dama
            dama].
ACCESSION   XP_061012874
VERSION     XP_061012874.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156891.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..585
                     /product="coiled-coil domain-containing protein 170-like
                     isoform X1"
                     /calculated_mol_wt=67171
     Region          <85..>574
                     /region_name="CCDC158"
                     /note="Coiled-coil domain-containing protein 158;
                     pfam15921"
                     /db_xref="CDD:464943"
     Region          <328..>535
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..585
                     /gene="LOC133066129"
                     /coded_by="XM_061156891.1:1036..2793"
                     /db_xref="GeneID:133066129"
ORIGIN      
        1 msspfqflsh snpgklanaq skgprkakpl evkknlsayt srknssgacl npplevvptr
       61 npvkctktat dsvhpdlagl lvknknllae lrnlrnklfi ketslqemks eletykennv
      121 qqsfqimslk ddikdleelt asltrikslk ntsiqslerg nwdlterite lenllrvhli
      181 erkraeqkad llekklagan rftpymsmke qedsldsfmt kdkdeailfe rdntfrsegp
      241 kdgqkiwdkc qqdlihkekq ipeldrpths ynwetktars nyqkflsqls alpsnsvept
      301 paieeavker iletganeqs wksraevlqq eiqmltkrle kqshhseeta relsntekky
      361 mgqkrplkcl egkiaindlf qgkldldmnk ifqvdkhgia fkqlekdnkq etllniqqnf
      421 qtvttqrlee kiqklqkqls dlklsnknmk sqltrvnilk dktieklres ltkveamkgk
      481 aametdlnit vdsdeqearw gkkkvhqmle tatpelstak stleevpgkq eelvdfreti
      541 mkmlgfnmkt adkkiinhlr liiqvyeasd kskmaseret gqdne
//
LOCUS       XP_061012875             585 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 170-like isoform X1 [Dama
            dama].
ACCESSION   XP_061012875
VERSION     XP_061012875.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156892.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..585
                     /product="coiled-coil domain-containing protein 170-like
                     isoform X1"
                     /calculated_mol_wt=67171
     Region          <85..>574
                     /region_name="CCDC158"
                     /note="Coiled-coil domain-containing protein 158;
                     pfam15921"
                     /db_xref="CDD:464943"
     Region          <328..>535
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..585
                     /gene="LOC133066129"
                     /coded_by="XM_061156892.1:317..2074"
                     /db_xref="GeneID:133066129"
ORIGIN      
        1 msspfqflsh snpgklanaq skgprkakpl evkknlsayt srknssgacl npplevvptr
       61 npvkctktat dsvhpdlagl lvknknllae lrnlrnklfi ketslqemks eletykennv
      121 qqsfqimslk ddikdleelt asltrikslk ntsiqslerg nwdlterite lenllrvhli
      181 erkraeqkad llekklagan rftpymsmke qedsldsfmt kdkdeailfe rdntfrsegp
      241 kdgqkiwdkc qqdlihkekq ipeldrpths ynwetktars nyqkflsqls alpsnsvept
      301 paieeavker iletganeqs wksraevlqq eiqmltkrle kqshhseeta relsntekky
      361 mgqkrplkcl egkiaindlf qgkldldmnk ifqvdkhgia fkqlekdnkq etllniqqnf
      421 qtvttqrlee kiqklqkqls dlklsnknmk sqltrvnilk dktieklres ltkveamkgk
      481 aametdlnit vdsdeqearw gkkkvhqmle tatpelstak stleevpgkq eelvdfreti
      541 mkmlgfnmkt adkkiinhlr liiqvyeasd kskmaseret gqdne
//
LOCUS       XP_061012876             585 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 170-like isoform X1 [Dama
            dama].
ACCESSION   XP_061012876
VERSION     XP_061012876.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156893.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..585
                     /product="coiled-coil domain-containing protein 170-like
                     isoform X1"
                     /calculated_mol_wt=67171
     Region          <85..>574
                     /region_name="CCDC158"
                     /note="Coiled-coil domain-containing protein 158;
                     pfam15921"
                     /db_xref="CDD:464943"
     Region          <328..>535
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..585
                     /gene="LOC133066129"
                     /coded_by="XM_061156893.1:2161..3918"
                     /db_xref="GeneID:133066129"
ORIGIN      
        1 msspfqflsh snpgklanaq skgprkakpl evkknlsayt srknssgacl npplevvptr
       61 npvkctktat dsvhpdlagl lvknknllae lrnlrnklfi ketslqemks eletykennv
      121 qqsfqimslk ddikdleelt asltrikslk ntsiqslerg nwdlterite lenllrvhli
      181 erkraeqkad llekklagan rftpymsmke qedsldsfmt kdkdeailfe rdntfrsegp
      241 kdgqkiwdkc qqdlihkekq ipeldrpths ynwetktars nyqkflsqls alpsnsvept
      301 paieeavker iletganeqs wksraevlqq eiqmltkrle kqshhseeta relsntekky
      361 mgqkrplkcl egkiaindlf qgkldldmnk ifqvdkhgia fkqlekdnkq etllniqqnf
      421 qtvttqrlee kiqklqkqls dlklsnknmk sqltrvnilk dktieklres ltkveamkgk
      481 aametdlnit vdsdeqearw gkkkvhqmle tatpelstak stleevpgkq eelvdfreti
      541 mkmlgfnmkt adkkiinhlr liiqvyeasd kskmaseret gqdne
//
LOCUS       XP_061012877             585 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 170-like isoform X1 [Dama
            dama].
ACCESSION   XP_061012877
VERSION     XP_061012877.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156894.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..585
                     /product="coiled-coil domain-containing protein 170-like
                     isoform X1"
                     /calculated_mol_wt=67171
     Region          <85..>574
                     /region_name="CCDC158"
                     /note="Coiled-coil domain-containing protein 158;
                     pfam15921"
                     /db_xref="CDD:464943"
     Region          <328..>535
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..585
                     /gene="LOC133066129"
                     /coded_by="XM_061156894.1:2222..3979"
                     /db_xref="GeneID:133066129"
ORIGIN      
        1 msspfqflsh snpgklanaq skgprkakpl evkknlsayt srknssgacl npplevvptr
       61 npvkctktat dsvhpdlagl lvknknllae lrnlrnklfi ketslqemks eletykennv
      121 qqsfqimslk ddikdleelt asltrikslk ntsiqslerg nwdlterite lenllrvhli
      181 erkraeqkad llekklagan rftpymsmke qedsldsfmt kdkdeailfe rdntfrsegp
      241 kdgqkiwdkc qqdlihkekq ipeldrpths ynwetktars nyqkflsqls alpsnsvept
      301 paieeavker iletganeqs wksraevlqq eiqmltkrle kqshhseeta relsntekky
      361 mgqkrplkcl egkiaindlf qgkldldmnk ifqvdkhgia fkqlekdnkq etllniqqnf
      421 qtvttqrlee kiqklqkqls dlklsnknmk sqltrvnilk dktieklres ltkveamkgk
      481 aametdlnit vdsdeqearw gkkkvhqmle tatpelstak stleevpgkq eelvdfreti
      541 mkmlgfnmkt adkkiinhlr liiqvyeasd kskmaseret gqdne
//
LOCUS       XP_061012878             585 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 170-like isoform X1 [Dama
            dama].
ACCESSION   XP_061012878
VERSION     XP_061012878.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156895.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..585
                     /product="coiled-coil domain-containing protein 170-like
                     isoform X1"
                     /calculated_mol_wt=67171
     Region          <85..>574
                     /region_name="CCDC158"
                     /note="Coiled-coil domain-containing protein 158;
                     pfam15921"
                     /db_xref="CDD:464943"
     Region          <328..>535
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..585
                     /gene="LOC133066129"
                     /coded_by="XM_061156895.1:956..2713"
                     /db_xref="GeneID:133066129"
ORIGIN      
        1 msspfqflsh snpgklanaq skgprkakpl evkknlsayt srknssgacl npplevvptr
       61 npvkctktat dsvhpdlagl lvknknllae lrnlrnklfi ketslqemks eletykennv
      121 qqsfqimslk ddikdleelt asltrikslk ntsiqslerg nwdlterite lenllrvhli
      181 erkraeqkad llekklagan rftpymsmke qedsldsfmt kdkdeailfe rdntfrsegp
      241 kdgqkiwdkc qqdlihkekq ipeldrpths ynwetktars nyqkflsqls alpsnsvept
      301 paieeavker iletganeqs wksraevlqq eiqmltkrle kqshhseeta relsntekky
      361 mgqkrplkcl egkiaindlf qgkldldmnk ifqvdkhgia fkqlekdnkq etllniqqnf
      421 qtvttqrlee kiqklqkqls dlklsnknmk sqltrvnilk dktieklres ltkveamkgk
      481 aametdlnit vdsdeqearw gkkkvhqmle tatpelstak stleevpgkq eelvdfreti
      541 mkmlgfnmkt adkkiinhlr liiqvyeasd kskmaseret gqdne
//
LOCUS       XP_061012879             582 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 170-like isoform X2 [Dama
            dama].
ACCESSION   XP_061012879
VERSION     XP_061012879.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156896.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..582
                     /product="coiled-coil domain-containing protein 170-like
                     isoform X2"
                     /calculated_mol_wt=66782
     CDS             1..582
                     /gene="LOC133066129"
                     /coded_by="XM_061156896.1:2167..3915"
                     /db_xref="GeneID:133066129"
ORIGIN      
        1 msspfqflsh snpgklanaq skgprkakpl evkknlsayt srknssgacl npplevvptr
       61 npvkctktat dsvhpdlagl lvknknllae lrnlrnklfi ketslqemks eletykennv
      121 qqsfqimslk ddikdleelt asltrikslk ntsiqslerg nwdlterite lenllrvhli
      181 erkraeqkad llekklagan rftpymsmke qedsldsfmt kdkdeailfe rdntfrsegp
      241 kdgqkiwdkc qqdlihkekq ipeldrpths ynwetktars nyqkflsqls alpsnsvept
      301 paieeavker iletganeqs wksraevlqq eiqmltkrle kqshhseeta relsntekky
      361 mgqkrplkcl egkiaindlf qgkldldmnk vdkhgiafkq lekdnkqetl lniqqnfqtv
      421 ttqrleekiq klqkqlsdlk lsnknmksql trvnilkdkt ieklresltk veamkgkaam
      481 etdlnitvds deqearwgkk kvhqmletat pelstakstl eevpgkqeel vdfretimkm
      541 lgfnmktadk kiinhlrlii qvyeasdksk maseretgqd ne
//
LOCUS       XP_061012880             542 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 170-like isoform X3 [Dama
            dama].
ACCESSION   XP_061012880
VERSION     XP_061012880.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156897.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..542
                     /product="coiled-coil domain-containing protein 170-like
                     isoform X3"
                     /calculated_mol_wt=62608
     Region          <285..>492
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..542
                     /gene="LOC133066129"
                     /coded_by="XM_061156897.1:2167..3795"
                     /db_xref="GeneID:133066129"
ORIGIN      
        1 msspfqflsh snpgklanaq skgprkakpl evkknlsayt srknssglrn lrnklfiket
       61 slqemksele tykennvqqs fqimslkddi kdleeltasl trikslknts iqslergnwd
      121 lteritelen llrvhlierk raeqkadlle kklaganrft pymsmkeqed sldsfmtkdk
      181 deailferdn tfrsegpkdg qkiwdkcqqd lihkekqipe ldrpthsynw etktarsnyq
      241 kflsqlsalp snsveptpai eeavkerile tganeqswks raevlqqeiq mltkrlekqs
      301 hhseetarel sntekkymgq krplkclegk iaindlfqgk ldldmnkifq vdkhgiafkq
      361 lekdnkqetl lniqqnfqtv ttqrleekiq klqkqlsdlk lsnknmksql trvnilkdkt
      421 ieklresltk veamkgkaam etdlnitvds deqearwgkk kvhqmletat pelstakstl
      481 eevpgkqeel vdfretimkm lgfnmktadk kiinhlrlii qvyeasdksk maseretgqd
      541 ne
//
LOCUS       XP_061012881             539 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 170-like isoform X4 [Dama
            dama].
ACCESSION   XP_061012881
VERSION     XP_061012881.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156898.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..539
                     /product="coiled-coil domain-containing protein 170-like
                     isoform X4"
                     /calculated_mol_wt=62244
     Region          <282..487
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..539
                     /gene="LOC133066129"
                     /coded_by="XM_061156898.1:1970..3589"
                     /db_xref="GeneID:133066129"
ORIGIN      
        1 maclnpplev vptrnpvkct ktatdsvhpd lagllvknkn llaelrnlrn klfiketslq
       61 emkseletyk ennvqqsfqi mslkddikdl eeltasltri kslkntsiqs lergnwdlte
      121 ritelenllr vhlierkrae qkadllekkl aganrftpym smkeqedsld sfmtkdkdea
      181 ilferdntfr segpkdgqki wdkcqqdlih kekqipeldr pthsynwetk tarsnyqkfl
      241 sqlsalpsns veptpaieea vkeriletga neqswksrae vlqqeiqmlt krlekqshhs
      301 eetarelsnt ekkymgqkrp lkclegkiai ndlfqgkldl dmnkifqvdk hgiafkqlek
      361 dnkqetllni qqnfqtvttq rleekiqklq kqlsdlklsn knmksqltrv nilkdktiek
      421 lresltkvea mkgkaametd lnitvdsdeq earwgkkkvh qmletatpel stakstleev
      481 pgkqeelvdf retimkmlgf nmktadkkii nhlrliiqvy easdkskmas eretgqdne
//
LOCUS       XP_061012882             512 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 170-like isoform X5 [Dama
            dama].
ACCESSION   XP_061012882
VERSION     XP_061012882.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156899.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..512
                     /product="coiled-coil domain-containing protein 170-like
                     isoform X5"
                     /calculated_mol_wt=59720
     Region          <255..>462
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..512
                     /gene="LOC133066129"
                     /coded_by="XM_061156899.1:52..1590"
                     /db_xref="GeneID:133066129"
ORIGIN      
        1 mrercvdwme dmigcwklrn lrnklfiket slqemksele tykennvqqs fqimslkddi
       61 kdleeltasl trikslknts iqslergnwd lteritelen llrvhlierk raeqkadlle
      121 kklaganrft pymsmkeqed sldsfmtkdk deailferdn tfrsegpkdg qkiwdkcqqd
      181 lihkekqipe ldrpthsynw etktarsnyq kflsqlsalp snsveptpai eeavkerile
      241 tganeqswks raevlqqeiq mltkrlekqs hhseetarel sntekkymgq krplkclegk
      301 iaindlfqgk ldldmnkifq vdkhgiafkq lekdnkqetl lniqqnfqtv ttqrleekiq
      361 klqkqlsdlk lsnknmksql trvnilkdkt ieklresltk veamkgkaam etdlnitvds
      421 deqearwgkk kvhqmletat pelstakstl eevpgkqeel vdfretimkm lgfnmktadk
      481 kiinhlrlii qvyeasdksk maseretgqd ne
//
LOCUS       XP_061012883             478 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 170-like isoform X6 [Dama
            dama].
ACCESSION   XP_061012883
VERSION     XP_061012883.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156900.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..478
                     /product="coiled-coil domain-containing protein 170-like
                     isoform X6"
                     /calculated_mol_wt=55465
     Region          <221..>428
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..478
                     /gene="LOC133066129"
                     /coded_by="XM_061156900.1:2073..3509"
                     /db_xref="GeneID:133066129"
ORIGIN      
        1 mkseletyke nnvqqsfqim slkddikdle eltasltrik slkntsiqsl ergnwdlter
       61 itelenllrv hlierkraeq kadllekkla ganrftpyms mkeqedslds fmtkdkdeai
      121 lferdntfrs egpkdgqkiw dkcqqdlihk ekqipeldrp thsynwetkt arsnyqkfls
      181 qlsalpsnsv eptpaieeav keriletgan eqswksraev lqqeiqmltk rlekqshhse
      241 etarelsnte kkymgqkrpl kclegkiain dlfqgkldld mnkifqvdkh giafkqlekd
      301 nkqetllniq qnfqtvttqr leekiqklqk qlsdlklsnk nmksqltrvn ilkdktiekl
      361 resltkveam kgkaametdl nitvdsdeqe arwgkkkvhq mletatpels takstleevp
      421 gkqeelvdfr etimkmlgfn mktadkkiin hlrliiqvye asdkskmase retgqdne
//
LOCUS       XP_061012884             478 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 170-like isoform X6 [Dama
            dama].
ACCESSION   XP_061012884
VERSION     XP_061012884.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156901.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..478
                     /product="coiled-coil domain-containing protein 170-like
                     isoform X6"
                     /calculated_mol_wt=55465
     Region          <221..>428
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..478
                     /gene="LOC133066129"
                     /coded_by="XM_061156901.1:388..1824"
                     /db_xref="GeneID:133066129"
ORIGIN      
        1 mkseletyke nnvqqsfqim slkddikdle eltasltrik slkntsiqsl ergnwdlter
       61 itelenllrv hlierkraeq kadllekkla ganrftpyms mkeqedslds fmtkdkdeai
      121 lferdntfrs egpkdgqkiw dkcqqdlihk ekqipeldrp thsynwetkt arsnyqkfls
      181 qlsalpsnsv eptpaieeav keriletgan eqswksraev lqqeiqmltk rlekqshhse
      241 etarelsnte kkymgqkrpl kclegkiain dlfqgkldld mnkifqvdkh giafkqlekd
      301 nkqetllniq qnfqtvttqr leekiqklqk qlsdlklsnk nmksqltrvn ilkdktiekl
      361 resltkveam kgkaametdl nitvdsdeqe arwgkkkvhq mletatpels takstleevp
      421 gkqeelvdfr etimkmlgfn mktadkkiin hlrliiqvye asdkskmase retgqdne
//
LOCUS       XP_061012885             478 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 170-like isoform X6 [Dama
            dama].
ACCESSION   XP_061012885
VERSION     XP_061012885.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156902.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..478
                     /product="coiled-coil domain-containing protein 170-like
                     isoform X6"
                     /calculated_mol_wt=55465
     Region          <221..>428
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..478
                     /gene="LOC133066129"
                     /coded_by="XM_061156902.1:2122..3558"
                     /db_xref="GeneID:133066129"
ORIGIN      
        1 mkseletyke nnvqqsfqim slkddikdle eltasltrik slkntsiqsl ergnwdlter
       61 itelenllrv hlierkraeq kadllekkla ganrftpyms mkeqedslds fmtkdkdeai
      121 lferdntfrs egpkdgqkiw dkcqqdlihk ekqipeldrp thsynwetkt arsnyqkfls
      181 qlsalpsnsv eptpaieeav keriletgan eqswksraev lqqeiqmltk rlekqshhse
      241 etarelsnte kkymgqkrpl kclegkiain dlfqgkldld mnkifqvdkh giafkqlekd
      301 nkqetllniq qnfqtvttqr leekiqklqk qlsdlklsnk nmksqltrvn ilkdktiekl
      361 resltkveam kgkaametdl nitvdsdeqe arwgkkkvhq mletatpels takstleevp
      421 gkqeelvdfr etimkmlgfn mktadkkiin hlrliiqvye asdkskmase retgqdne
//
LOCUS       XP_061012886             447 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger and BTB domain-containing protein 25 isoform X1 [Dama
            dama].
ACCESSION   XP_061012886
VERSION     XP_061012886.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156903.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..447
                     /product="zinc finger and BTB domain-containing protein 25
                     isoform X1"
                     /calculated_mol_wt=49737
     Region          3..130
                     /region_name="BTB_POZ_ZBTB25_ZNF46_KUP"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in zinc finger and
                     BTB domain-containing protein 25 (ZBTB25); cd18213"
                     /db_xref="CDD:349522"
     Region          240..260
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          240..260
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     CDS             1..447
                     /gene="ZBTB25"
                     /coded_by="XM_061156903.1:345..1688"
                     /db_xref="GeneID:133066131"
ORIGIN      
        1 mdtashslvl lqqlnmqref gflcdctvai gdvyfkahra vlaafsnyfk mifihqtsec
       61 ikiqptdiqp difsyllhim ytgkgpkqiv dhsrleegir flhadylshi atemnqvfsp
      121 etvqssnlyg iqisttqktv vkpglevkea psnnsgnraa vqgdhpqlql slaiglddgt
      181 adqqrahpas qaleehqkpp vsikqercdp esvisqsrps pssevtgptf tesgikihlc
      241 hycgerfdsr snlrqhlhth vsgslpfgvp asilesndlg evhplnense aldcrglssf
      301 ivkeneqqpd lsnrgatepl qisqvslisk dtepvelncn fsfsrkrkis cticghkflr
      361 ksqllehmyt hkavsakccl psvevsslyq vtfwmcdakm hqwvqflsti icsasqlpsl
      421 erkvvsstfl evscfapfsl pfllslq
//
LOCUS       XP_061012887             435 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger and BTB domain-containing protein 25 isoform X2 [Dama
            dama].
ACCESSION   XP_061012887
VERSION     XP_061012887.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156904.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..435
                     /product="zinc finger and BTB domain-containing protein 25
                     isoform X2"
                     /calculated_mol_wt=48616
     Region          3..130
                     /region_name="BTB_POZ_ZBTB25_ZNF46_KUP"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in zinc finger and
                     BTB domain-containing protein 25 (ZBTB25); cd18213"
                     /db_xref="CDD:349522"
     Region          240..260
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          240..260
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     CDS             1..435
                     /gene="ZBTB25"
                     /coded_by="XM_061156904.1:345..1652"
                     /db_xref="GeneID:133066131"
ORIGIN      
        1 mdtashslvl lqqlnmqref gflcdctvai gdvyfkahra vlaafsnyfk mifihqtsec
       61 ikiqptdiqp difsyllhim ytgkgpkqiv dhsrleegir flhadylshi atemnqvfsp
      121 etvqssnlyg iqisttqktv vkpglevkea psnnsgnraa vqgdhpqlql slaiglddgt
      181 adqqrahpas qaleehqkpp vsikqercdp esvisqsrps pssevtgptf tesgikihlc
      241 hycgerfdsr snlrqhlhth vsgslpfgvp asilesndlg evhplnense aldcrglssf
      301 ivkeneqqpd lsnrgatepl qisqvslisk dtepvelncn fsfsrkrkis cticghkflr
      361 ksqllehmyt hkgksyrynr cqrfgnalaq rfppycdsws diplkssrls qeqldsscal
      421 eseltqenvd tilve
//
LOCUS       XP_061012888             408 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger and BTB domain-containing protein 25 isoform X3 [Dama
            dama].
ACCESSION   XP_061012888
VERSION     XP_061012888.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156905.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..408
                     /product="zinc finger and BTB domain-containing protein 25
                     isoform X3"
                     /calculated_mol_wt=45281
     Region          3..130
                     /region_name="BTB_POZ_ZBTB25_ZNF46_KUP"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in zinc finger and
                     BTB domain-containing protein 25 (ZBTB25); cd18213"
                     /db_xref="CDD:349522"
     Region          240..260
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          240..260
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     CDS             1..408
                     /gene="ZBTB25"
                     /coded_by="XM_061156905.1:345..1571"
                     /db_xref="GeneID:133066131"
ORIGIN      
        1 mdtashslvl lqqlnmqref gflcdctvai gdvyfkahra vlaafsnyfk mifihqtsec
       61 ikiqptdiqp difsyllhim ytgkgpkqiv dhsrleegir flhadylshi atemnqvfsp
      121 etvqssnlyg iqisttqktv vkpglevkea psnnsgnraa vqgdhpqlql slaiglddgt
      181 adqqrahpas qaleehqkpp vsikqercdp esvisqsrps pssevtgptf tesgikihlc
      241 hycgerfdsr snlrqhlhth vsgslpfgvp asilesndlg evhplnense aldcrglssf
      301 ivkeneqqpd lsnrgatepl qisqvslisk dtepvelncn fsfsrkrkis cticghkflr
      361 ksqllehmyt hkavsakccl psveeeeiai hssilarkml wieepggl
//
LOCUS       XP_061012889             378 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger and BTB domain-containing protein 25 isoform X4 [Dama
            dama].
ACCESSION   XP_061012889
VERSION     XP_061012889.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156906.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..378
                     /product="zinc finger and BTB domain-containing protein 25
                     isoform X4"
                     /calculated_mol_wt=42050
     Region          3..130
                     /region_name="BTB_POZ_ZBTB25_ZNF46_KUP"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in zinc finger and
                     BTB domain-containing protein 25 (ZBTB25); cd18213"
                     /db_xref="CDD:349522"
     Region          240..260
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          240..260
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     CDS             1..378
                     /gene="ZBTB25"
                     /coded_by="XM_061156906.1:345..1481"
                     /db_xref="GeneID:133066131"
ORIGIN      
        1 mdtashslvl lqqlnmqref gflcdctvai gdvyfkahra vlaafsnyfk mifihqtsec
       61 ikiqptdiqp difsyllhim ytgkgpkqiv dhsrleegir flhadylshi atemnqvfsp
      121 etvqssnlyg iqisttqktv vkpglevkea psnnsgnraa vqgdhpqlql slaiglddgt
      181 adqqrahpas qaleehqkpp vsikqercdp esvisqsrps pssevtgptf tesgikihlc
      241 hycgerfdsr snlrqhlhth vsgslpfgvp asilesndlg evhplnense aldcrglssf
      301 ivkeneqqpd lsnrgatepl qisqvslisk dtepvelncn fsfsrkrkis cticghkflr
      361 ksqllehmyt hkgefltl
//
LOCUS       XP_061012890             527 aa            linear   MAM 02-DEC-2023
DEFINITION  estrogen receptor beta [Dama dama].
ACCESSION   XP_061012890
VERSION     XP_061012890.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156907.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..527
                     /product="estrogen receptor beta"
                     /calculated_mol_wt=58912
     Region          12..122
                     /region_name="ERbeta_N"
                     /note="Estrogen receptor beta; pfam12497"
                     /db_xref="CDD:463610"
     Region          141..222
                     /region_name="NR_DBD_ER"
                     /note="DNA-binding domain of estrogen receptors (ER) is
                     composed of two C4-type zinc fingers; cd07171"
                     /db_xref="CDD:143545"
     Site            order(146,149,163,166,182,188,198,201)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143545"
     Site            order(155..158,164..165,167..169,171..172,195..196,199,
                     202)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143545"
     Site            order(181..184,188..189,194,197)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143545"
     Region          260..495
                     /region_name="NR_LBD_ER"
                     /note="Ligand binding domain of Estrogen receptor, which
                     are activated by the hormone 17beta-estradiol (estrogen);
                     cd06949"
                     /db_xref="CDD:132747"
     Site            order(295,300,302,336,343,469,472)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:132747"
     Site            order(307,311,324..325,329,486,490..491)
                     /site_type="other"
                     /note="coactivator recognition site [polypeptide binding]"
                     /db_xref="CDD:132747"
     Site            order(400,404,406..407,427,431..432,435,449..450,452..454,
                     456..457,460..461,463..464,467)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:132747"
     CDS             1..527
                     /gene="ESR2"
                     /coded_by="XM_061156907.1:62..1645"
                     /db_xref="GeneID:133066133"
ORIGIN      
        1 mdvknspssl nspvsyncgq silplepgpi ylpssyvesr heysamtfys pavmnysipn
       61 nsedgpgrqt tspnvlwptp ghlsplaihc qssllyaepq kspwcetrsl ehtlpvnret
      121 lkrkasgssc aspvaspssk rdahfcavcs dyasgyhygv wscegckaff krsiqghndy
      181 icpatnqcti dknrrkscqa crlrkcyevg mvkcgsrrer cgyrivrrqr nsdeqlhcls
      241 ktkrnggpmt rvkelllsal speqlvltll eaepphvlvs rpsvpfteas mmmsltklad
      301 kelvhmiswa kkipgfvels lydqvrlles cwlevlmvgl mwrsidhpgk lifapdlvld
      361 rdegkcvegi leifdmllat tsrfrelklq hkeylcvkam illnssmyps atapqeadsg
      421 rklthlmnav tdalvwviak sgvsyqqqsv rlanllmlls hvrhasnkgm ehllnmkckn
      481 vvpvydllle mlnahtlrgn kslvtgsern lvedseskeg sqnpqdq
//
LOCUS       XP_061012891            6946 aa            linear   MAM 02-DEC-2023
DEFINITION  nesprin-2 isoform X1 [Dama dama].
ACCESSION   XP_061012891
VERSION     XP_061012891.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156908.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..6946
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..6946
                     /product="nesprin-2 isoform X1"
                     /calculated_mol_wt=801302
     Region          28..138
                     /region_name="CH_SYNE2_rpt1"
                     /note="first calponin homology (CH) domain found in
                     synaptic nuclear envelope protein 2; cd21242"
                     /db_xref="CDD:409091"
     Site            order(33,37,89,91..92,95..96,98,107..115,120,122..123,
                     125..126,129..130,133)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409091"
     Region          178..286
                     /region_name="CH_SYNE2_rpt2"
                     /note="second calponin homology (CH) domain found in
                     synaptic nuclear envelope protein 2 (SYNE-2) and similar
                     proteins; cd21244"
                     /db_xref="CDD:409093"
     Site            order(183,187,237,239..240,243..244,246,255..263,270,
                     272..273,275..276,279..280,283)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409093"
     Region          <782..>1045
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     Region          1444..1652
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            1540..1545
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          <2083..>3272
                     /region_name="PTZ00440"
                     /note="reticulocyte binding protein 2-like protein;
                     Provisional"
                     /db_xref="CDD:240419"
     Region          <2690..3437
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <3565..>4057
                     /region_name="CCDC158"
                     /note="Coiled-coil domain-containing protein 158;
                     pfam15921"
                     /db_xref="CDD:464943"
     Region          <3819..>4068
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     Region          <4620..>4964
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     Region          4845..5059
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            order(4948..4950,4952..4954)
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          5073..5275
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Region          5105..6033
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Site            5174..5179
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          5811..6026
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            5922..5927
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          5926..6140
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            6027..6032
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          6144..6354
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            6250..6255
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          6610..6827
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            6716..6721
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          <6915..6946
                     /region_name="KASH"
                     /note="Nuclear envelope localization domain; pfam10541"
                     /db_xref="CDD:463142"
     CDS             1..6946
                     /gene="SYNE2"
                     /coded_by="XM_061156908.1:151..20991"
                     /db_xref="GeneID:133066134"
ORIGIN      
        1 masspvlpte dqqvsldidd lhfslqaeqe dtqkktftcw insqlakhtp psvvtdlftd
       61 ikkghvlldl levlsgqqlp rdkgsntfqc rinienaltf lknqsiklin ihvtdiidgn
      121 psiilgliwt iilhfhieel artlpgnysq psldsvstvd ssptssppak kcskvqerwr
      181 msakkallqw aqeqcasyes vsvtdfkssw rngmaflavi halrpdlidm ksvkhrsnrd
      241 nlkeafriae qelkipkmle pedvdvvnpd eksimtyvaq flqyskkapg sgdeaqgkvk
      301 damvwlalqe kkfqkmltds enetycktye sllsflesfn kekerfldvl tikrnvddln
      361 kdqlqlreaw dglnyqinvw qtelnrvlps plfqietwlq eveklidedl svsqdyneam
      421 altqekitlf qslmdkfdfh lntllafenr denhlplvpp ekleemkrri nnisgekvip
      481 clefhyyecs vlglleevks kllvwnikyg skesvellle dwhkfieeke flaqletsfq
      541 kceeihnnla geypniskqy tmvkyhlsmy renilnvkst lqkvlacwat yvenlrllka
      601 cfeetkkeqm kevpfetlsq wnlqhttlne vgnflfqvsn devgssiske lrrlnkrwrk
      661 litkpqhean lplmklqdep fldnsgniql skeenltvgf ltdtsselpe nhnqnimage
      721 ehekenedfs gplkvakeve rligqvetwe aettsvldll rqqddvetsm eeslqhliak
      781 gsmyeelvsr tedtlqmdiq qvssqeslqh vltaglqaki qeakekvqin mvklvtvlkn
      841 stdvsqdldv rlkveeteke lesyitrakq llgqkesqkg liskykeali ifntkslaky
      901 lkaveelknn vtddvklsle eksrdirakw eslhhemsly iqqlkidiek vklsdsiakl
      961 ekqinkekkl irrgrtkgli keheacfsee gslyqldrhm dvlrelceel tsqksqqevr
     1021 ralkdyeqki erlrkcasei hatlqptlgg tsrnkgttda sengggntls evpsaksdsq
     1081 psaekamelv qnfnlesklk pqqeesimek yekghstsid sllerydthq dtlelhlqns
     1141 iaritsdfss dkerssvclq dkltdlqvlk netdacwkef eitslkleel esdikkpfiv
     1201 kardklkeke relqmtlksr mesletvlqm vlpvereall lcntdlllce maiqefhltd
     1261 addiyqnlrs iqdsivkqie tcknlgqsgn falkelhpld lhaaqniilk hrtqleemnh
     1321 rvqkskdalk aledflaslr atelsgellt dhsasdsqvv pantltvenk ereihqmkdk
     1381 arhlderlkm lgisikdseq gentscekll dalsknlset pcsggqeevt eedkllgaci
     1441 fkndellkni qdvhnqiski glkdptvpai kqrrkslirl dkdldeyeee kkhlqemvns
     1501 lpqfkdgrdk alsqrcqdta vlwenaktlv tecldqcerv lellkqyqnf ksvlttliqk
     1561 eenvislqas ymgkenlkkr iaeievvkee fnehleivdk inqicknlqf hlnkmrtfee
     1621 ppfekeanii vdrwldinek tedyyenlgr alalwdklfy lkngiddwte kvlqklelhq
     1681 lteeeteklk eelqvheqkp sefskrvaki qfllqsseip lelqvmessi lnkiehvkmr
     1741 ltggstygai sgntaelred ldqaktqigm tesllnalsp sdsleiftkl eeiqqqilqq
     1801 khsmillenq igcltpelse lkkqyesvsd lfntkksvlq dhfskllndq cknfndwfgs
     1861 ikmnlkecfe psetkksveq klqklsdflt legrgseiqq vgtvlnhvkk hlpkapvkkl
     1921 nswivsqeve lekmesicqa rareldecvq qllrlqndhr nlskwltnqe eiwkemegtq
     1981 ektelfcqtl arkreqfesm aqlnnsvkqy giteeeeivt esthlidryq tllrqiceid
     2041 kedklppaed qsfsdlahdv ihwitgikes lmvlnssegk mpleerihki keiillkpeg
     2101 dakiqtimsq aessqapvvp ktltdiknqw dntlhlanty lshqekllle gekylqsked
     2161 lrlmltelkk kqevgfalqp glqekkaqlk ickkflqkaq dltflleelk sqgnyllect
     2221 knpnfseepw leikhlhesl lqqlqdsvqk leghvqehds yqlcvtdlnt aldyiskefv
     2281 cfsdrpvder aveeklqklq elenslhlqd gtlekiltla ksikqntssa gqkmikddik
     2341 slkckqkele nrlesakqem enclnsilks kcstekkakf plpgreeqvt sdvqestqds
     2401 aavekleedw einknsalem ilsrqlsldv qesmkntede qkvnelqnqp leldvmlrne
     2461 qlkeieelct qlegkkaaie pleqseylnk tetsalvlhd esysvqhldn llqalitlkk
     2521 kkesqycllk dfqghlmaae slmkslltek eslkvgllds atyldkiknf lasiekekds
     2581 lskmkiewen lsncltdmdk kllesqikll ehgweqveql vqkkysqqav gheefmflrn
     2641 kiqdletslq qqqqhlqlrl nspeaqegnl smvalatelh tikhrfsmlk gqaelqmkri
     2701 wgekerkile daisnlqkql ealeplnmev enqikkcetr ykineailwv knllgeltpp
     2761 isllpddils qirkckvvhd gildkqqvve slveevkdni phlteyennd lnnllqdlqn
     2821 qyqmlvlkst qrsqqlehkl eerskfvaii gkvqlslqgn etliipktet tsteaeleql
     2881 yvalttsqke lqeiksvist hlqeqtnmsk dlsvferlfl ddrlknlktr anrtqrfiqn
     2941 kcnevehkin fyrefhekvs alqkefdhiq hnelllnpev npdvkeelyh lknqitgiqs
     3001 silqvlklke vfdcielnwd wtqldqiqtq vlekereleg kikqlntfva eydkyqasla
     3061 klkaldlqik kraelvltmp stppesslln aqilnqrigk amslyheiik klsenkdfdd
     3121 lfkerelqql klyaeennkl rqvlqqkval qsqlkemdek dfqdklensl hvlnqiksql
     3181 qqpllinlqi eyiqnekdnc evfkeqvqae mdsikavtvi ekqseensse asnveaklnd
     3241 iedlymqlna sidsrtnvln dayenmtryn eavsramgii sdleaiiamp rvdldnpees
     3301 vevprqkqee lkstiagiqd ltenlgtvcs leakrqvect lqdlvsknsa lreaakvkea
     3361 evercldnyq cyrninekic tnlsqmetil gqsmcplpvs ykealerleq skalvsnlms
     3421 akeelmkqrq vlrhlramct dsdslcllrs tsalwerwls lleaakewem wceelkqewk
     3481 fvheeierev iildnlqeev peiskakeaa steelsglld clcqyeenve rqqllltlll
     3541 qrikniqntp eglgvvesvp asqeimsmqe rchklfqkaq knkelmqnei qerhsftkei
     3601 ttlknlfqqt ttsfqnmelq dcpekaeqle elqsilkkgk ltfenimekl rikysemyti
     3661 vpaeiesqve ecrkaladvd ekisnevlrs spsytmsrki deinnglcnv kkmlqqkskn
     3721 ietaqeiqkk mwdeldlwhs klneldsevq diveqdpgqa qewmdklmip fqqyqqvsqr
     3781 aesrtsqlnk atvkmeeyhd llksteawie ntsrlladpa dydsskalsh hasalqmale
     3841 dseqkhallh svftdledls aifetddlaq siqelshqia alqqriiesl pqiqrmaddv
     3901 vaietevksm ekrvskikai llskeifdfs peehlkhgev ilenirpmkk tiaeivsyqv
     3961 elrlpqtgmk plpvfqrtnr llqdikllen mtqeqnellk ivikqtnecn eeieklkqil
     4021 nnypaefshe hmstdqaanl sqvqgeiesm ekqilslnqk kedlladlka ailnlhqhlq
     4081 qkqqeleqev lsvgaseesa gaekdasewk lnrtgsmsfl paleeeaees slksesgdkk
     4141 aepssgfpsl lwkhnkdaee drassssgti vqeaagkist cdssmaqvle pdllnieqgp
     4201 kfslspnqtp egatppikaa atdlsgeqga featvekvrp epaevlhvck nqvaelelwl
     4261 qqanvafepe tldadmqqvv eqqlvgcqam lteiehkvas llescrdqgl gdsgdtqqea
     4321 ealslklktv kcnlekvqmm lqekysedqh sttlkksseh qkvlqpdnls efesvvterp
     4381 qfsrqkdfqq qqvlelkpme qkdlikfief nanktwpqyc qhdkdttqms sassktsspk
     4441 ndapdlilst qgqsgdkwqy lhhelsskir lppsqlvqpq vttnmsvlps vsmynfrypa
     4501 teelktyttq ledlrqeann lqaqenmsee tymnldkklf elfqtliqcl gsveemlqtp
     4561 glfrgdvgsq qvhyetlale lkklylamsd kkndlskamt wpgknasqfl dcfenlqvyl
     4621 ehtqataasr skalkagldy trsyqneikr lydqlvknkt slqqslneis gqtvdeqlqk
     4681 vdvytvelqn sesrvaklrd egerlhlpyv llqevykled vldstwgilr arytelsspf
     4741 itesqqdall qgmvelvnig keklahdhlq qtkskvalqa qiqnhklffq klvadmlliq
     4801 tysnkmlpsl mqkketfgae qvkevkllee kshqygiklq sllqkweefd enyaslekdl
     4861 eilmstlpsv slveeteerl verisyyqqi krnmdekhar lyqtlnegkq lvvsvncpel
     4921 egqiakleeq wlslnkkidh elhrlqtllk hllsynrdsd qltkwlessq qtlnywkeqs
     4981 lnvsqdldti rsninnffef skevdekssl ktavlstgnq llhlkeadta tlraslaqfe
     5041 qkwtvlitql pdiqeklhql qmeklpsrka imemidwmnn vehqtededs ehslssasqv
     5101 knllqkykef rmemdykqwi vdfvnqsllq lstcdveskr yertefaehl gemnrqwqrv
     5161 hgalngkiqh leqllesite nenkiqilnn wmeaqeerlk tlqkpesvis vqktlldcqd
     5221 ienqlaiksk aldelrqnyp tlesgtvpll edtaskinel fqkrnnvmnq vnelktstqs
     5281 vlqewkiydk lyeevnmmti rfwycmehsk pvvlslealr cqvqnlqtlq deaessegsw
     5341 kklqevigkl keycpsvaei iqekcqntht rwtqvnqdia dqlqraqsll qlwkaynsah
     5401 aeaatrleqq eikyqqlani ntsgnnlaei lppalqdake lqcdvqktke aflqnstlld
     5461 rlpqpaesnt hvllsgqmhs lqrasylekm llvktnefef vlsqfkdfgd rleslkglit
     5521 heeenldkly rqekegnpdl flnhvlalta qspdiehlne vslklplsdv avktlqnvnr
     5581 qwiratatal ercselqgig lnekflhcce kwvqllekie etlkanmads lpalleqqkt
     5641 yemleaevsi nqiiadsyvs qclhlldtae iekrpefvwk ftrlkeqwqs aaqgvrqrkg
     5701 nidelvrqwr afttsegdll rfladtshll savksqdchs lhqtrslihe lknkeihlqr
     5761 wqttyaltle agekllntan lepkesvnkr isqlqdnwkd trlqlgevik qfqsaaetwd
     5821 qcekkikelk nrlhvlkaqs keplpelhee lhrekelike lekslanwtq nlkelhtmkt
     5881 dltqhilvdd vmvlkeqieh lhrqwedlcl rvairkqeie drlnswmvfn eknkelcawl
     5941 vqmenkvlqt adisieemie klqkdcmeei nlfsenklql kqmgdqlika snktraaeid
     6001 dklnkindrw qhlfdvigsr vkklketfaf iqqldknmsn lrtwlaries elskpvvydv
     6061 cddqeiqkrl aeqqdlqrdi eqhsagvesv fnicdvllhd sdacanetec dsiqqttrsl
     6121 drrwrnicam smerrmkiee twrlwqkfld dysrfedwlk aaertaacpn ssevlytvak
     6181 eelkrfeafq rqiherltql elinkqyrrl arenrtdtas klkqmvhegn qrwdnlqkrv
     6241 tailrrlrhf tnqreefegt resilvwlte mdlqltnveh fsesdaddkm rqlngfqqei
     6301 tlntnkidql ivfgeqliqk sepldavlie deleelhryc qevfgrvsrf hrrltshapc
     6361 firrrqwqpt pvllpgkshg rrrlgledek easenetdve dpreiqddsw rkrgaseeps
     6421 spqslcqlvp palgpersgc etpvsvdsip lewdhtgdvg gsssheedee gpyysalsdi
     6481 eilenpeayl kmttktlkas sgksisegps whvpdspscp krrykqmggd rnvqpipsds
     6541 stpykpayvk lllspgtegv kedpgvltgs aqqededlaa ltgqqpgafd rweliqaqel
     6601 hnklrkkqnl qklnsdisni tpwlektgae letlklaepp sdmqemelqv kklkeilkaf
     6661 dsykalvvsv nvnskeflqs esaeskelqd rvgqltlrwn talgtveswr eglrrslmqc
     6721 qdfhqlsqsl llwlasaesr rekahvtdpe adpqvllacq eelmqlekel verqpqvnsl
     6781 qeisstllik ghgedyieae ekvhviekkl kqlleqvsqd lvslqqsqnp dsplpsvdev
     6841 dhrgplaasa papqaqqfea ekatkeknkt asrvpspaap esakpqrsfl srviraalpl
     6901 qlllllllll acllpsseed ysctqannfa rsfypmlryt ngpppt
//
LOCUS       XP_061012892            6921 aa            linear   MAM 02-DEC-2023
DEFINITION  nesprin-2 isoform X2 [Dama dama].
ACCESSION   XP_061012892
VERSION     XP_061012892.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156909.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..6921
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..6921
                     /product="nesprin-2 isoform X2"
                     /calculated_mol_wt=798261
     Region          28..138
                     /region_name="CH_SYNE2_rpt1"
                     /note="first calponin homology (CH) domain found in
                     synaptic nuclear envelope protein 2; cd21242"
                     /db_xref="CDD:409091"
     Site            order(33,37,89,91..92,95..96,98,107..115,120,122..123,
                     125..126,129..130,133)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409091"
     Region          178..286
                     /region_name="CH_SYNE2_rpt2"
                     /note="second calponin homology (CH) domain found in
                     synaptic nuclear envelope protein 2 (SYNE-2) and similar
                     proteins; cd21244"
                     /db_xref="CDD:409093"
     Site            order(183,187,237,239..240,243..244,246,255..263,270,
                     272..273,275..276,279..280,283)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409093"
     Region          <782..>1045
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     Region          1444..1652
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            1540..1545
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          <2083..>3272
                     /region_name="PTZ00440"
                     /note="reticulocyte binding protein 2-like protein;
                     Provisional"
                     /db_xref="CDD:240419"
     Region          <2690..3437
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <3565..>4057
                     /region_name="CCDC158"
                     /note="Coiled-coil domain-containing protein 158;
                     pfam15921"
                     /db_xref="CDD:464943"
     Region          <3819..>4068
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     Region          <4620..>4964
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     Region          4845..5059
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            order(4948..4950,4952..4954)
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          5073..5275
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Region          5105..6033
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Site            5174..5179
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          5811..6026
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            5922..5927
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          5926..6140
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            6027..6032
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          6144..6354
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            6250..6255
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          6585..6802
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            6691..6696
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          <6890..6921
                     /region_name="KASH"
                     /note="Nuclear envelope localization domain; pfam10541"
                     /db_xref="CDD:463142"
     CDS             1..6921
                     /gene="SYNE2"
                     /coded_by="XM_061156909.1:150..20915"
                     /db_xref="GeneID:133066134"
ORIGIN      
        1 masspvlpte dqqvsldidd lhfslqaeqe dtqkktftcw insqlakhtp psvvtdlftd
       61 ikkghvlldl levlsgqqlp rdkgsntfqc rinienaltf lknqsiklin ihvtdiidgn
      121 psiilgliwt iilhfhieel artlpgnysq psldsvstvd ssptssppak kcskvqerwr
      181 msakkallqw aqeqcasyes vsvtdfkssw rngmaflavi halrpdlidm ksvkhrsnrd
      241 nlkeafriae qelkipkmle pedvdvvnpd eksimtyvaq flqyskkapg sgdeaqgkvk
      301 damvwlalqe kkfqkmltds enetycktye sllsflesfn kekerfldvl tikrnvddln
      361 kdqlqlreaw dglnyqinvw qtelnrvlps plfqietwlq eveklidedl svsqdyneam
      421 altqekitlf qslmdkfdfh lntllafenr denhlplvpp ekleemkrri nnisgekvip
      481 clefhyyecs vlglleevks kllvwnikyg skesvellle dwhkfieeke flaqletsfq
      541 kceeihnnla geypniskqy tmvkyhlsmy renilnvkst lqkvlacwat yvenlrllka
      601 cfeetkkeqm kevpfetlsq wnlqhttlne vgnflfqvsn devgssiske lrrlnkrwrk
      661 litkpqhean lplmklqdep fldnsgniql skeenltvgf ltdtsselpe nhnqnimage
      721 ehekenedfs gplkvakeve rligqvetwe aettsvldll rqqddvetsm eeslqhliak
      781 gsmyeelvsr tedtlqmdiq qvssqeslqh vltaglqaki qeakekvqin mvklvtvlkn
      841 stdvsqdldv rlkveeteke lesyitrakq llgqkesqkg liskykeali ifntkslaky
      901 lkaveelknn vtddvklsle eksrdirakw eslhhemsly iqqlkidiek vklsdsiakl
      961 ekqinkekkl irrgrtkgli keheacfsee gslyqldrhm dvlrelceel tsqksqqevr
     1021 ralkdyeqki erlrkcasei hatlqptlgg tsrnkgttda sengggntls evpsaksdsq
     1081 psaekamelv qnfnlesklk pqqeesimek yekghstsid sllerydthq dtlelhlqns
     1141 iaritsdfss dkerssvclq dkltdlqvlk netdacwkef eitslkleel esdikkpfiv
     1201 kardklkeke relqmtlksr mesletvlqm vlpvereall lcntdlllce maiqefhltd
     1261 addiyqnlrs iqdsivkqie tcknlgqsgn falkelhpld lhaaqniilk hrtqleemnh
     1321 rvqkskdalk aledflaslr atelsgellt dhsasdsqvv pantltvenk ereihqmkdk
     1381 arhlderlkm lgisikdseq gentscekll dalsknlset pcsggqeevt eedkllgaci
     1441 fkndellkni qdvhnqiski glkdptvpai kqrrkslirl dkdldeyeee kkhlqemvns
     1501 lpqfkdgrdk alsqrcqdta vlwenaktlv tecldqcerv lellkqyqnf ksvlttliqk
     1561 eenvislqas ymgkenlkkr iaeievvkee fnehleivdk inqicknlqf hlnkmrtfee
     1621 ppfekeanii vdrwldinek tedyyenlgr alalwdklfy lkngiddwte kvlqklelhq
     1681 lteeeteklk eelqvheqkp sefskrvaki qfllqsseip lelqvmessi lnkiehvkmr
     1741 ltggstygai sgntaelred ldqaktqigm tesllnalsp sdsleiftkl eeiqqqilqq
     1801 khsmillenq igcltpelse lkkqyesvsd lfntkksvlq dhfskllndq cknfndwfgs
     1861 ikmnlkecfe psetkksveq klqklsdflt legrgseiqq vgtvlnhvkk hlpkapvkkl
     1921 nswivsqeve lekmesicqa rareldecvq qllrlqndhr nlskwltnqe eiwkemegtq
     1981 ektelfcqtl arkreqfesm aqlnnsvkqy giteeeeivt esthlidryq tllrqiceid
     2041 kedklppaed qsfsdlahdv ihwitgikes lmvlnssegk mpleerihki keiillkpeg
     2101 dakiqtimsq aessqapvvp ktltdiknqw dntlhlanty lshqekllle gekylqsked
     2161 lrlmltelkk kqevgfalqp glqekkaqlk ickkflqkaq dltflleelk sqgnyllect
     2221 knpnfseepw leikhlhesl lqqlqdsvqk leghvqehds yqlcvtdlnt aldyiskefv
     2281 cfsdrpvder aveeklqklq elenslhlqd gtlekiltla ksikqntssa gqkmikddik
     2341 slkckqkele nrlesakqem enclnsilks kcstekkakf plpgreeqvt sdvqestqds
     2401 aavekleedw einknsalem ilsrqlsldv qesmkntede qkvnelqnqp leldvmlrne
     2461 qlkeieelct qlegkkaaie pleqseylnk tetsalvlhd esysvqhldn llqalitlkk
     2521 kkesqycllk dfqghlmaae slmkslltek eslkvgllds atyldkiknf lasiekekds
     2581 lskmkiewen lsncltdmdk kllesqikll ehgweqveql vqkkysqqav gheefmflrn
     2641 kiqdletslq qqqqhlqlrl nspeaqegnl smvalatelh tikhrfsmlk gqaelqmkri
     2701 wgekerkile daisnlqkql ealeplnmev enqikkcetr ykineailwv knllgeltpp
     2761 isllpddils qirkckvvhd gildkqqvve slveevkdni phlteyennd lnnllqdlqn
     2821 qyqmlvlkst qrsqqlehkl eerskfvaii gkvqlslqgn etliipktet tsteaeleql
     2881 yvalttsqke lqeiksvist hlqeqtnmsk dlsvferlfl ddrlknlktr anrtqrfiqn
     2941 kcnevehkin fyrefhekvs alqkefdhiq hnelllnpev npdvkeelyh lknqitgiqs
     3001 silqvlklke vfdcielnwd wtqldqiqtq vlekereleg kikqlntfva eydkyqasla
     3061 klkaldlqik kraelvltmp stppesslln aqilnqrigk amslyheiik klsenkdfdd
     3121 lfkerelqql klyaeennkl rqvlqqkval qsqlkemdek dfqdklensl hvlnqiksql
     3181 qqpllinlqi eyiqnekdnc evfkeqvqae mdsikavtvi ekqseensse asnveaklnd
     3241 iedlymqlna sidsrtnvln dayenmtryn eavsramgii sdleaiiamp rvdldnpees
     3301 vevprqkqee lkstiagiqd ltenlgtvcs leakrqvect lqdlvsknsa lreaakvkea
     3361 evercldnyq cyrninekic tnlsqmetil gqsmcplpvs ykealerleq skalvsnlms
     3421 akeelmkqrq vlrhlramct dsdslcllrs tsalwerwls lleaakewem wceelkqewk
     3481 fvheeierev iildnlqeev peiskakeaa steelsglld clcqyeenve rqqllltlll
     3541 qrikniqntp eglgvvesvp asqeimsmqe rchklfqkaq knkelmqnei qerhsftkei
     3601 ttlknlfqqt ttsfqnmelq dcpekaeqle elqsilkkgk ltfenimekl rikysemyti
     3661 vpaeiesqve ecrkaladvd ekisnevlrs spsytmsrki deinnglcnv kkmlqqkskn
     3721 ietaqeiqkk mwdeldlwhs klneldsevq diveqdpgqa qewmdklmip fqqyqqvsqr
     3781 aesrtsqlnk atvkmeeyhd llksteawie ntsrlladpa dydsskalsh hasalqmale
     3841 dseqkhallh svftdledls aifetddlaq siqelshqia alqqriiesl pqiqrmaddv
     3901 vaietevksm ekrvskikai llskeifdfs peehlkhgev ilenirpmkk tiaeivsyqv
     3961 elrlpqtgmk plpvfqrtnr llqdikllen mtqeqnellk ivikqtnecn eeieklkqil
     4021 nnypaefshe hmstdqaanl sqvqgeiesm ekqilslnqk kedlladlka ailnlhqhlq
     4081 qkqqeleqev lsvgaseesa gaekdasewk lnrtgsmsfl paleeeaees slksesgdkk
     4141 aepssgfpsl lwkhnkdaee drassssgti vqeaagkist cdssmaqvle pdllnieqgp
     4201 kfslspnqtp egatppikaa atdlsgeqga featvekvrp epaevlhvck nqvaelelwl
     4261 qqanvafepe tldadmqqvv eqqlvgcqam lteiehkvas llescrdqgl gdsgdtqqea
     4321 ealslklktv kcnlekvqmm lqekysedqh sttlkksseh qkvlqpdnls efesvvterp
     4381 qfsrqkdfqq qqvlelkpme qkdlikfief nanktwpqyc qhdkdttqms sassktsspk
     4441 ndapdlilst qgqsgdkwqy lhhelsskir lppsqlvqpq vttnmsvlps vsmynfrypa
     4501 teelktyttq ledlrqeann lqaqenmsee tymnldkklf elfqtliqcl gsveemlqtp
     4561 glfrgdvgsq qvhyetlale lkklylamsd kkndlskamt wpgknasqfl dcfenlqvyl
     4621 ehtqataasr skalkagldy trsyqneikr lydqlvknkt slqqslneis gqtvdeqlqk
     4681 vdvytvelqn sesrvaklrd egerlhlpyv llqevykled vldstwgilr arytelsspf
     4741 itesqqdall qgmvelvnig keklahdhlq qtkskvalqa qiqnhklffq klvadmlliq
     4801 tysnkmlpsl mqkketfgae qvkevkllee kshqygiklq sllqkweefd enyaslekdl
     4861 eilmstlpsv slveeteerl verisyyqqi krnmdekhar lyqtlnegkq lvvsvncpel
     4921 egqiakleeq wlslnkkidh elhrlqtllk hllsynrdsd qltkwlessq qtlnywkeqs
     4981 lnvsqdldti rsninnffef skevdekssl ktavlstgnq llhlkeadta tlraslaqfe
     5041 qkwtvlitql pdiqeklhql qmeklpsrka imemidwmnn vehqtededs ehslssasqv
     5101 knllqkykef rmemdykqwi vdfvnqsllq lstcdveskr yertefaehl gemnrqwqrv
     5161 hgalngkiqh leqllesite nenkiqilnn wmeaqeerlk tlqkpesvis vqktlldcqd
     5221 ienqlaiksk aldelrqnyp tlesgtvpll edtaskinel fqkrnnvmnq vnelktstqs
     5281 vlqewkiydk lyeevnmmti rfwycmehsk pvvlslealr cqvqnlqtlq deaessegsw
     5341 kklqevigkl keycpsvaei iqekcqntht rwtqvnqdia dqlqraqsll qlwkaynsah
     5401 aeaatrleqq eikyqqlani ntsgnnlaei lppalqdake lqcdvqktke aflqnstlld
     5461 rlpqpaesnt hvllsgqmhs lqrasylekm llvktnefef vlsqfkdfgd rleslkglit
     5521 heeenldkly rqekegnpdl flnhvlalta qspdiehlne vslklplsdv avktlqnvnr
     5581 qwiratatal ercselqgig lnekflhcce kwvqllekie etlkanmads lpalleqqkt
     5641 yemleaevsi nqiiadsyvs qclhlldtae iekrpefvwk ftrlkeqwqs aaqgvrqrkg
     5701 nidelvrqwr afttsegdll rfladtshll savksqdchs lhqtrslihe lknkeihlqr
     5761 wqttyaltle agekllntan lepkesvnkr isqlqdnwkd trlqlgevik qfqsaaetwd
     5821 qcekkikelk nrlhvlkaqs keplpelhee lhrekelike lekslanwtq nlkelhtmkt
     5881 dltqhilvdd vmvlkeqieh lhrqwedlcl rvairkqeie drlnswmvfn eknkelcawl
     5941 vqmenkvlqt adisieemie klqkdcmeei nlfsenklql kqmgdqlika snktraaeid
     6001 dklnkindrw qhlfdvigsr vkklketfaf iqqldknmsn lrtwlaries elskpvvydv
     6061 cddqeiqkrl aeqqdlqrdi eqhsagvesv fnicdvllhd sdacanetec dsiqqttrsl
     6121 drrwrnicam smerrmkiee twrlwqkfld dysrfedwlk aaertaacpn ssevlytvak
     6181 eelkrfeafq rqiherltql elinkqyrrl arenrtdtas klkqmvhegn qrwdnlqkrv
     6241 tailrrlrhf tnqreefegt resilvwlte mdlqltnveh fsesdaddkm rqlngfqqei
     6301 tlntnkidql ivfgeqliqk sepldavlie deleelhryc qevfgrvsrf hrrltshapg
     6361 ledekeasen etdvedprei qddswrkrga seepsspqsl cqlvppalgp ersgcetpvs
     6421 vdsiplewdh tgdvggsssh eedeegpyys alsdieilen peaylkmttk tlkassgksi
     6481 segpswhvpd spscpkrryk qmggdrnvqp ipsdsstpyk payvklllsp gtegvkedpg
     6541 vltgsaqqed edlaaltgqq pgafdrweli qaqelhnklr kkqnlqklns disnitpwle
     6601 ktgaeletlk laeppsdmqe melqvkklke ilkafdsyka lvvsvnvnsk eflqsesaes
     6661 kelqdrvgql tlrwntalgt veswreglrr slmqcqdfhq lsqslllwla saesrrekah
     6721 vtdpeadpqv llacqeelmq lekelverqp qvnslqeiss tllikghged yieaeekvhv
     6781 iekklkqlle qvsqdlvslq qsqnpdsplp svdevdhrgp laasapapqa qqfeaekatk
     6841 eknktasrvp spaapesakp qrsflsrvir aalplqllll lllllacllp sseedysctq
     6901 annfarsfyp mlrytngppp t
//
LOCUS       XP_061012893            6898 aa            linear   MAM 02-DEC-2023
DEFINITION  nesprin-2 isoform X3 [Dama dama].
ACCESSION   XP_061012893
VERSION     XP_061012893.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156910.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..6898
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..6898
                     /product="nesprin-2 isoform X3"
                     /calculated_mol_wt=795683
     Region          28..138
                     /region_name="CH_SYNE2_rpt1"
                     /note="first calponin homology (CH) domain found in
                     synaptic nuclear envelope protein 2; cd21242"
                     /db_xref="CDD:409091"
     Site            order(33,37,89,91..92,95..96,98,107..115,120,122..123,
                     125..126,129..130,133)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409091"
     Region          178..286
                     /region_name="CH_SYNE2_rpt2"
                     /note="second calponin homology (CH) domain found in
                     synaptic nuclear envelope protein 2 (SYNE-2) and similar
                     proteins; cd21244"
                     /db_xref="CDD:409093"
     Site            order(183,187,237,239..240,243..244,246,255..263,270,
                     272..273,275..276,279..280,283)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409093"
     Region          <782..>1045
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     Region          1444..1652
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            1540..1545
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          <2083..>3272
                     /region_name="PTZ00440"
                     /note="reticulocyte binding protein 2-like protein;
                     Provisional"
                     /db_xref="CDD:240419"
     Region          <2690..3437
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <3565..>4057
                     /region_name="CCDC158"
                     /note="Coiled-coil domain-containing protein 158;
                     pfam15921"
                     /db_xref="CDD:464943"
     Region          <3819..>4068
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     Region          <4620..>4964
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     Region          4845..5059
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            order(4948..4950,4952..4954)
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          5073..5275
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Region          5105..6033
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Site            5174..5179
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          5811..6026
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            5922..5927
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          5926..6140
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            6027..6032
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          6144..6354
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            6250..6255
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          6562..6779
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            6668..6673
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          <6867..6898
                     /region_name="KASH"
                     /note="Nuclear envelope localization domain; pfam10541"
                     /db_xref="CDD:463142"
     CDS             1..6898
                     /gene="SYNE2"
                     /coded_by="XM_061156910.1:150..20846"
                     /db_xref="GeneID:133066134"
ORIGIN      
        1 masspvlpte dqqvsldidd lhfslqaeqe dtqkktftcw insqlakhtp psvvtdlftd
       61 ikkghvlldl levlsgqqlp rdkgsntfqc rinienaltf lknqsiklin ihvtdiidgn
      121 psiilgliwt iilhfhieel artlpgnysq psldsvstvd ssptssppak kcskvqerwr
      181 msakkallqw aqeqcasyes vsvtdfkssw rngmaflavi halrpdlidm ksvkhrsnrd
      241 nlkeafriae qelkipkmle pedvdvvnpd eksimtyvaq flqyskkapg sgdeaqgkvk
      301 damvwlalqe kkfqkmltds enetycktye sllsflesfn kekerfldvl tikrnvddln
      361 kdqlqlreaw dglnyqinvw qtelnrvlps plfqietwlq eveklidedl svsqdyneam
      421 altqekitlf qslmdkfdfh lntllafenr denhlplvpp ekleemkrri nnisgekvip
      481 clefhyyecs vlglleevks kllvwnikyg skesvellle dwhkfieeke flaqletsfq
      541 kceeihnnla geypniskqy tmvkyhlsmy renilnvkst lqkvlacwat yvenlrllka
      601 cfeetkkeqm kevpfetlsq wnlqhttlne vgnflfqvsn devgssiske lrrlnkrwrk
      661 litkpqhean lplmklqdep fldnsgniql skeenltvgf ltdtsselpe nhnqnimage
      721 ehekenedfs gplkvakeve rligqvetwe aettsvldll rqqddvetsm eeslqhliak
      781 gsmyeelvsr tedtlqmdiq qvssqeslqh vltaglqaki qeakekvqin mvklvtvlkn
      841 stdvsqdldv rlkveeteke lesyitrakq llgqkesqkg liskykeali ifntkslaky
      901 lkaveelknn vtddvklsle eksrdirakw eslhhemsly iqqlkidiek vklsdsiakl
      961 ekqinkekkl irrgrtkgli keheacfsee gslyqldrhm dvlrelceel tsqksqqevr
     1021 ralkdyeqki erlrkcasei hatlqptlgg tsrnkgttda sengggntls evpsaksdsq
     1081 psaekamelv qnfnlesklk pqqeesimek yekghstsid sllerydthq dtlelhlqns
     1141 iaritsdfss dkerssvclq dkltdlqvlk netdacwkef eitslkleel esdikkpfiv
     1201 kardklkeke relqmtlksr mesletvlqm vlpvereall lcntdlllce maiqefhltd
     1261 addiyqnlrs iqdsivkqie tcknlgqsgn falkelhpld lhaaqniilk hrtqleemnh
     1321 rvqkskdalk aledflaslr atelsgellt dhsasdsqvv pantltvenk ereihqmkdk
     1381 arhlderlkm lgisikdseq gentscekll dalsknlset pcsggqeevt eedkllgaci
     1441 fkndellkni qdvhnqiski glkdptvpai kqrrkslirl dkdldeyeee kkhlqemvns
     1501 lpqfkdgrdk alsqrcqdta vlwenaktlv tecldqcerv lellkqyqnf ksvlttliqk
     1561 eenvislqas ymgkenlkkr iaeievvkee fnehleivdk inqicknlqf hlnkmrtfee
     1621 ppfekeanii vdrwldinek tedyyenlgr alalwdklfy lkngiddwte kvlqklelhq
     1681 lteeeteklk eelqvheqkp sefskrvaki qfllqsseip lelqvmessi lnkiehvkmr
     1741 ltggstygai sgntaelred ldqaktqigm tesllnalsp sdsleiftkl eeiqqqilqq
     1801 khsmillenq igcltpelse lkkqyesvsd lfntkksvlq dhfskllndq cknfndwfgs
     1861 ikmnlkecfe psetkksveq klqklsdflt legrgseiqq vgtvlnhvkk hlpkapvkkl
     1921 nswivsqeve lekmesicqa rareldecvq qllrlqndhr nlskwltnqe eiwkemegtq
     1981 ektelfcqtl arkreqfesm aqlnnsvkqy giteeeeivt esthlidryq tllrqiceid
     2041 kedklppaed qsfsdlahdv ihwitgikes lmvlnssegk mpleerihki keiillkpeg
     2101 dakiqtimsq aessqapvvp ktltdiknqw dntlhlanty lshqekllle gekylqsked
     2161 lrlmltelkk kqevgfalqp glqekkaqlk ickkflqkaq dltflleelk sqgnyllect
     2221 knpnfseepw leikhlhesl lqqlqdsvqk leghvqehds yqlcvtdlnt aldyiskefv
     2281 cfsdrpvder aveeklqklq elenslhlqd gtlekiltla ksikqntssa gqkmikddik
     2341 slkckqkele nrlesakqem enclnsilks kcstekkakf plpgreeqvt sdvqestqds
     2401 aavekleedw einknsalem ilsrqlsldv qesmkntede qkvnelqnqp leldvmlrne
     2461 qlkeieelct qlegkkaaie pleqseylnk tetsalvlhd esysvqhldn llqalitlkk
     2521 kkesqycllk dfqghlmaae slmkslltek eslkvgllds atyldkiknf lasiekekds
     2581 lskmkiewen lsncltdmdk kllesqikll ehgweqveql vqkkysqqav gheefmflrn
     2641 kiqdletslq qqqqhlqlrl nspeaqegnl smvalatelh tikhrfsmlk gqaelqmkri
     2701 wgekerkile daisnlqkql ealeplnmev enqikkcetr ykineailwv knllgeltpp
     2761 isllpddils qirkckvvhd gildkqqvve slveevkdni phlteyennd lnnllqdlqn
     2821 qyqmlvlkst qrsqqlehkl eerskfvaii gkvqlslqgn etliipktet tsteaeleql
     2881 yvalttsqke lqeiksvist hlqeqtnmsk dlsvferlfl ddrlknlktr anrtqrfiqn
     2941 kcnevehkin fyrefhekvs alqkefdhiq hnelllnpev npdvkeelyh lknqitgiqs
     3001 silqvlklke vfdcielnwd wtqldqiqtq vlekereleg kikqlntfva eydkyqasla
     3061 klkaldlqik kraelvltmp stppesslln aqilnqrigk amslyheiik klsenkdfdd
     3121 lfkerelqql klyaeennkl rqvlqqkval qsqlkemdek dfqdklensl hvlnqiksql
     3181 qqpllinlqi eyiqnekdnc evfkeqvqae mdsikavtvi ekqseensse asnveaklnd
     3241 iedlymqlna sidsrtnvln dayenmtryn eavsramgii sdleaiiamp rvdldnpees
     3301 vevprqkqee lkstiagiqd ltenlgtvcs leakrqvect lqdlvsknsa lreaakvkea
     3361 evercldnyq cyrninekic tnlsqmetil gqsmcplpvs ykealerleq skalvsnlms
     3421 akeelmkqrq vlrhlramct dsdslcllrs tsalwerwls lleaakewem wceelkqewk
     3481 fvheeierev iildnlqeev peiskakeaa steelsglld clcqyeenve rqqllltlll
     3541 qrikniqntp eglgvvesvp asqeimsmqe rchklfqkaq knkelmqnei qerhsftkei
     3601 ttlknlfqqt ttsfqnmelq dcpekaeqle elqsilkkgk ltfenimekl rikysemyti
     3661 vpaeiesqve ecrkaladvd ekisnevlrs spsytmsrki deinnglcnv kkmlqqkskn
     3721 ietaqeiqkk mwdeldlwhs klneldsevq diveqdpgqa qewmdklmip fqqyqqvsqr
     3781 aesrtsqlnk atvkmeeyhd llksteawie ntsrlladpa dydsskalsh hasalqmale
     3841 dseqkhallh svftdledls aifetddlaq siqelshqia alqqriiesl pqiqrmaddv
     3901 vaietevksm ekrvskikai llskeifdfs peehlkhgev ilenirpmkk tiaeivsyqv
     3961 elrlpqtgmk plpvfqrtnr llqdikllen mtqeqnellk ivikqtnecn eeieklkqil
     4021 nnypaefshe hmstdqaanl sqvqgeiesm ekqilslnqk kedlladlka ailnlhqhlq
     4081 qkqqeleqev lsvgaseesa gaekdasewk lnrtgsmsfl paleeeaees slksesgdkk
     4141 aepssgfpsl lwkhnkdaee drassssgti vqeaagkist cdssmaqvle pdllnieqgp
     4201 kfslspnqtp egatppikaa atdlsgeqga featvekvrp epaevlhvck nqvaelelwl
     4261 qqanvafepe tldadmqqvv eqqlvgcqam lteiehkvas llescrdqgl gdsgdtqqea
     4321 ealslklktv kcnlekvqmm lqekysedqh sttlkksseh qkvlqpdnls efesvvterp
     4381 qfsrqkdfqq qqvlelkpme qkdlikfief nanktwpqyc qhdkdttqms sassktsspk
     4441 ndapdlilst qgqsgdkwqy lhhelsskir lppsqlvqpq vttnmsvlps vsmynfrypa
     4501 teelktyttq ledlrqeann lqaqenmsee tymnldkklf elfqtliqcl gsveemlqtp
     4561 glfrgdvgsq qvhyetlale lkklylamsd kkndlskamt wpgknasqfl dcfenlqvyl
     4621 ehtqataasr skalkagldy trsyqneikr lydqlvknkt slqqslneis gqtvdeqlqk
     4681 vdvytvelqn sesrvaklrd egerlhlpyv llqevykled vldstwgilr arytelsspf
     4741 itesqqdall qgmvelvnig keklahdhlq qtkskvalqa qiqnhklffq klvadmlliq
     4801 tysnkmlpsl mqkketfgae qvkevkllee kshqygiklq sllqkweefd enyaslekdl
     4861 eilmstlpsv slveeteerl verisyyqqi krnmdekhar lyqtlnegkq lvvsvncpel
     4921 egqiakleeq wlslnkkidh elhrlqtllk hllsynrdsd qltkwlessq qtlnywkeqs
     4981 lnvsqdldti rsninnffef skevdekssl ktavlstgnq llhlkeadta tlraslaqfe
     5041 qkwtvlitql pdiqeklhql qmeklpsrka imemidwmnn vehqtededs ehslssasqv
     5101 knllqkykef rmemdykqwi vdfvnqsllq lstcdveskr yertefaehl gemnrqwqrv
     5161 hgalngkiqh leqllesite nenkiqilnn wmeaqeerlk tlqkpesvis vqktlldcqd
     5221 ienqlaiksk aldelrqnyp tlesgtvpll edtaskinel fqkrnnvmnq vnelktstqs
     5281 vlqewkiydk lyeevnmmti rfwycmehsk pvvlslealr cqvqnlqtlq deaessegsw
     5341 kklqevigkl keycpsvaei iqekcqntht rwtqvnqdia dqlqraqsll qlwkaynsah
     5401 aeaatrleqq eikyqqlani ntsgnnlaei lppalqdake lqcdvqktke aflqnstlld
     5461 rlpqpaesnt hvllsgqmhs lqrasylekm llvktnefef vlsqfkdfgd rleslkglit
     5521 heeenldkly rqekegnpdl flnhvlalta qspdiehlne vslklplsdv avktlqnvnr
     5581 qwiratatal ercselqgig lnekflhcce kwvqllekie etlkanmads lpalleqqkt
     5641 yemleaevsi nqiiadsyvs qclhlldtae iekrpefvwk ftrlkeqwqs aaqgvrqrkg
     5701 nidelvrqwr afttsegdll rfladtshll savksqdchs lhqtrslihe lknkeihlqr
     5761 wqttyaltle agekllntan lepkesvnkr isqlqdnwkd trlqlgevik qfqsaaetwd
     5821 qcekkikelk nrlhvlkaqs keplpelhee lhrekelike lekslanwtq nlkelhtmkt
     5881 dltqhilvdd vmvlkeqieh lhrqwedlcl rvairkqeie drlnswmvfn eknkelcawl
     5941 vqmenkvlqt adisieemie klqkdcmeei nlfsenklql kqmgdqlika snktraaeid
     6001 dklnkindrw qhlfdvigsr vkklketfaf iqqldknmsn lrtwlaries elskpvvydv
     6061 cddqeiqkrl aeqqdlqrdi eqhsagvesv fnicdvllhd sdacanetec dsiqqttrsl
     6121 drrwrnicam smerrmkiee twrlwqkfld dysrfedwlk aaertaacpn ssevlytvak
     6181 eelkrfeafq rqiherltql elinkqyrrl arenrtdtas klkqmvhegn qrwdnlqkrv
     6241 tailrrlrhf tnqreefegt resilvwlte mdlqltnveh fsesdaddkm rqlngfqqei
     6301 tlntnkidql ivfgeqliqk sepldavlie deleelhryc qevfgrvsrf hrrltshapg
     6361 ledekeasen etdvedprei qddswrkrga seepsspqsl cqlvppalgp ersgcetpvs
     6421 vdsiplewdh tgdvggsssh eedeegpyys alsgksiseg pswhvpdsps cpkrrykqmg
     6481 gdrnvqpips dsstpykpay vklllspgte gvkedpgvlt gsaqqededl aaltgqqpga
     6541 fdrweliqaq elhnklrkkq nlqklnsdis nitpwlektg aeletlklae ppsdmqemel
     6601 qvkklkeilk afdsykalvv svnvnskefl qsesaeskel qdrvgqltlr wntalgtves
     6661 wreglrrslm qcqdfhqlsq slllwlasae srrekahvtd peadpqvlla cqeelmqlek
     6721 elverqpqvn slqeisstll ikghgedyie aeekvhviek klkqlleqvs qdlvslqqsq
     6781 npdsplpsvd evdhrgplaa sapapqaqqf eaekatkekn ktasrvpspa apesakpqrs
     6841 flsrviraal plqlllllll llacllpsse edysctqann farsfypmlr ytngpppt
//
LOCUS       XP_061012894             909 aa            linear   MAM 02-DEC-2023
DEFINITION  nesprin-2 isoform X4 [Dama dama].
ACCESSION   XP_061012894
VERSION     XP_061012894.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156911.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..909
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..909
                     /product="nesprin-2 isoform X4"
                     /calculated_mol_wt=103784
     Region          1..102
                     /region_name="SPEC"
                     /note="Spectrin repeats; smart00150"
                     /db_xref="CDD:197544"
     Region          107..317
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            213..218
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          573..790
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            679..684
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          <878..909
                     /region_name="KASH"
                     /note="Nuclear envelope localization domain; pfam10541"
                     /db_xref="CDD:463142"
     CDS             1..909
                     /gene="SYNE2"
                     /coded_by="XM_061156911.1:151..2880"
                     /db_xref="GeneID:133066134"
ORIGIN      
        1 msnlrtwlar ieselskpvv ydvcddqeiq krlaeqqdlq rdieqhsagv esvfnicdvl
       61 lhdsdacane tecdsiqqtt rsldrrwrni camsmerrmk ieetwrlwqk flddysrfed
      121 wlkaaertaa cpnssevlyt vakeelkrfe afqrqiherl tqlelinkqy rrlarenrtd
      181 tasklkqmvh egnqrwdnlq krvtailrrl rhftnqreef egtresilvw ltemdlqltn
      241 vehfsesdad dkmrqlngfq qeitlntnki dqlivfgeql iqksepldav liedeleelh
      301 rycqevfgrv srfhrrltsh apcfirrrqw qptpvllpgk shgrrrlgle dekeasenet
      361 dvedpreiqd dswrkrgase epsspqslcq lvppalgper sgcetpvsvd siplewdhtg
      421 dvggssshee deegpyysal sdieilenpe aylkmttktl kassgksise gpswhvpdsp
      481 scpkrrykqm ggdrnvqpip sdsstpykpa yvklllspgt egvkedpgvl tgsaqqeded
      541 laaltgqqpg afdrweliqa qelhnklrkk qnlqklnsdi snitpwlekt gaeletlkla
      601 eppsdmqeme lqvkklkeil kafdsykalv vsvnvnskef lqsesaeske lqdrvgqltl
      661 rwntalgtve swreglrrsl mqcqdfhqls qslllwlasa esrrekahvt dpeadpqvll
      721 acqeelmqle kelverqpqv nslqeisstl likghgedyi eaeekvhvie kklkqlleqv
      781 sqdlvslqqs qnpdsplpsv devdhrgpla asapapqaqq feaekatkek nktasrvpsp
      841 aapesakpqr sflsrviraa lplqllllll lllacllpss eedysctqan nfarsfypml
      901 rytngpppt
//
LOCUS       XP_061012895             370 aa            linear   MAM 02-DEC-2023
DEFINITION  actin-related protein 2/3 complex subunit 1A-like [Dama dama].
ACCESSION   XP_061012895
VERSION     XP_061012895.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156912.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..370
                     /product="actin-related protein 2/3 complex subunit
                     1A-like"
                     /calculated_mol_wt=41450
     Region          11..50
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <15..266
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          56..93
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          98..138
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          146..199
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          207..243
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          249..287
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..370
                     /gene="LOC133066135"
                     /coded_by="XM_061156912.1:151..1263"
                     /db_xref="GeneID:133066135"
ORIGIN      
        1 mslhqfllep itchawnrdr tqialspnnh evhiykkngg qwvkahelke hnghitgidw
       61 apksdrivtc gadrnayvws qkdgvwkptl vilrinraat fvkwsplenk favgsgarli
      121 svcyfesend wwvskhikkp irstvlsldw hpnnvllaag scdfkcrvfs ayikevdekp
      181 astpwgskmp fgqlmsefgg sgtggwvhgv sfsasgsrla wvshdstvsv adasksvqvs
      241 tlkteflpll svsfvsensv vaaghdccpm lfnyddrgcl tfvskldipk qsiqrnmsam
      301 erfrnmdkra ttedrntlle tlhqnsitqv siyevdkqdc rkfcttgidg amtiwdfktl
      361 essiqglrim
//
LOCUS       XP_061012897             446 aa            linear   MAM 02-DEC-2023
DEFINITION  sphingosine-1-phosphate phosphatase 1 [Dama dama].
ACCESSION   XP_061012897
VERSION     XP_061012897.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156914.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..446
                     /product="sphingosine-1-phosphate phosphatase 1"
                     /calculated_mol_wt=49458
     Region          131..280
                     /region_name="PAP2_SPPase1"
                     /note="PAP2_like proteins, sphingosine-1-phosphatase
                     subfamily. Sphingosine-1-phosphatase is an intracellular
                     enzyme located in the endoplasmic reticulum, which
                     regulates the level of sphingosine-1-phosphate (S1P), a
                     bioactive lipid. S1P acts as a second...; cd03388"
                     /db_xref="CDD:239482"
     Site            order(183,190,211..213,254,260,264)
                     /site_type="active"
                     /db_xref="CDD:239482"
     CDS             1..446
                     /gene="SGPP1"
                     /coded_by="XM_061156914.1:127..1467"
                     /db_xref="GeneID:133066137"
ORIGIN      
        1 mslgqwlaql vsslqdpqkv arfqqlcgve apasctaaaa gdpredekae ahlagesrrr
       61 erqpgaaggp pppesdrnqc paklggggga pngvrngrat evgpasprra gllrrnsltg
      121 eegqlahvsn wplhylfcfg telgnelfyi lffpfwiwnl dalvgrrlvv iwvlvmylgq
      181 ctkdiirwpr pasppvvkle vfynseysmp sthamsgtai pvsmilltyg rwqypltygl
      241 ilipcwcslv cisriymgmh sildviagfl ytililvify pfvdlidnfn qthryaplii
      301 iglhlalgif sftldtwsts rgdtaeilgs gagiacgshf tykmgllldp pldilplarh
      361 pisvtlfgka ilrifigmlf vlvvrdimkr itiplackif nipcddirka rqhmevelpy
      421 ryitygmvgf sitflvpyif ffigis
//
LOCUS       XP_061012898             386 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 89 [Dama dama].
ACCESSION   XP_061012898
VERSION     XP_061012898.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156915.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..386
                     /product="WD repeat-containing protein 89"
                     /calculated_mol_wt=42795
     Region          40..348
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(45,49,55..56,68,86,90,96..97,111..112,130,139,
                     145..146,168,186,191,197..198,210..211,233,237,243..244,
                     271..272,291,296,302..303,318..319,337,341,347..348)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          73..111
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          117..159
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          173..211
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          218..258
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          277..316
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          323..347
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..386
                     /gene="WDR89"
                     /coded_by="XM_061156915.1:119..1279"
                     /db_xref="GeneID:133066138"
ORIGIN      
        1 mekieeqfan lnivkrsset keptyllgid tsktvqtekg slvavlcsng siriydkerl
       61 nvlrefrgyp glngvkfans rdyvyssctd gtvkcwdarl aggkpvqlfk gypsnvfisf
      121 dissndhvic agtekvddda llvfwdarin sqdlstakep lgaysethsd ditqvcfhps
      181 npnmvvsgst dglvnvfdis adneddalvt tcnsvssvsf igwsgkdykq iycmthdegf
      241 cwwdlnhldt depitclnip dvrevikvke gnldyliggl yhektdklfv vggtntgiih
      301 imscmtsglv hvtslqggha aivrsfcwnm qddslltgge daqlllwkpg avektftkkd
      361 smkiassvyq rvrvhsndsy kkrkrq
//
LOCUS       XP_061012899             386 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 89 [Dama dama].
ACCESSION   XP_061012899
VERSION     XP_061012899.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156916.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..386
                     /product="WD repeat-containing protein 89"
                     /calculated_mol_wt=42795
     Region          40..348
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(45,49,55..56,68,86,90,96..97,111..112,130,139,
                     145..146,168,186,191,197..198,210..211,233,237,243..244,
                     271..272,291,296,302..303,318..319,337,341,347..348)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          73..111
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          117..159
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          173..211
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          218..258
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          277..316
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          323..347
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..386
                     /gene="WDR89"
                     /coded_by="XM_061156916.1:163..1323"
                     /db_xref="GeneID:133066138"
ORIGIN      
        1 mekieeqfan lnivkrsset keptyllgid tsktvqtekg slvavlcsng siriydkerl
       61 nvlrefrgyp glngvkfans rdyvyssctd gtvkcwdarl aggkpvqlfk gypsnvfisf
      121 dissndhvic agtekvddda llvfwdarin sqdlstakep lgaysethsd ditqvcfhps
      181 npnmvvsgst dglvnvfdis adneddalvt tcnsvssvsf igwsgkdykq iycmthdegf
      241 cwwdlnhldt depitclnip dvrevikvke gnldyliggl yhektdklfv vggtntgiih
      301 imscmtsglv hvtslqggha aivrsfcwnm qddslltgge daqlllwkpg avektftkkd
      361 smkiassvyq rvrvhsndsy kkrkrq
//
LOCUS       XP_061012900             386 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 89 [Dama dama].
ACCESSION   XP_061012900
VERSION     XP_061012900.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156917.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..386
                     /product="WD repeat-containing protein 89"
                     /calculated_mol_wt=42795
     Region          40..348
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(45,49,55..56,68,86,90,96..97,111..112,130,139,
                     145..146,168,186,191,197..198,210..211,233,237,243..244,
                     271..272,291,296,302..303,318..319,337,341,347..348)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          73..111
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          117..159
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          173..211
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          218..258
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          277..316
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          323..347
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..386
                     /gene="WDR89"
                     /coded_by="XM_061156917.1:218..1378"
                     /db_xref="GeneID:133066138"
ORIGIN      
        1 mekieeqfan lnivkrsset keptyllgid tsktvqtekg slvavlcsng siriydkerl
       61 nvlrefrgyp glngvkfans rdyvyssctd gtvkcwdarl aggkpvqlfk gypsnvfisf
      121 dissndhvic agtekvddda llvfwdarin sqdlstakep lgaysethsd ditqvcfhps
      181 npnmvvsgst dglvnvfdis adneddalvt tcnsvssvsf igwsgkdykq iycmthdegf
      241 cwwdlnhldt depitclnip dvrevikvke gnldyliggl yhektdklfv vggtntgiih
      301 imscmtsglv hvtslqggha aivrsfcwnm qddslltgge daqlllwkpg avektftkkd
      361 smkiassvyq rvrvhsndsy kkrkrq
//
LOCUS       XP_061012901             386 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 89 [Dama dama].
ACCESSION   XP_061012901
VERSION     XP_061012901.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156918.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..386
                     /product="WD repeat-containing protein 89"
                     /calculated_mol_wt=42795
     Region          40..348
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(45,49,55..56,68,86,90,96..97,111..112,130,139,
                     145..146,168,186,191,197..198,210..211,233,237,243..244,
                     271..272,291,296,302..303,318..319,337,341,347..348)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          73..111
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          117..159
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          173..211
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          218..258
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          277..316
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          323..347
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..386
                     /gene="WDR89"
                     /coded_by="XM_061156918.1:161..1321"
                     /db_xref="GeneID:133066138"
ORIGIN      
        1 mekieeqfan lnivkrsset keptyllgid tsktvqtekg slvavlcsng siriydkerl
       61 nvlrefrgyp glngvkfans rdyvyssctd gtvkcwdarl aggkpvqlfk gypsnvfisf
      121 dissndhvic agtekvddda llvfwdarin sqdlstakep lgaysethsd ditqvcfhps
      181 npnmvvsgst dglvnvfdis adneddalvt tcnsvssvsf igwsgkdykq iycmthdegf
      241 cwwdlnhldt depitclnip dvrevikvke gnldyliggl yhektdklfv vggtntgiih
      301 imscmtsglv hvtslqggha aivrsfcwnm qddslltgge daqlllwkpg avektftkkd
      361 smkiassvyq rvrvhsndsy kkrkrq
//
LOCUS       XP_061012902             386 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 89 [Dama dama].
ACCESSION   XP_061012902
VERSION     XP_061012902.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156919.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..386
                     /product="WD repeat-containing protein 89"
                     /calculated_mol_wt=42795
     Region          40..348
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(45,49,55..56,68,86,90,96..97,111..112,130,139,
                     145..146,168,186,191,197..198,210..211,233,237,243..244,
                     271..272,291,296,302..303,318..319,337,341,347..348)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          73..111
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          117..159
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          173..211
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          218..258
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          277..316
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          323..347
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..386
                     /gene="WDR89"
                     /coded_by="XM_061156919.1:84..1244"
                     /db_xref="GeneID:133066138"
ORIGIN      
        1 mekieeqfan lnivkrsset keptyllgid tsktvqtekg slvavlcsng siriydkerl
       61 nvlrefrgyp glngvkfans rdyvyssctd gtvkcwdarl aggkpvqlfk gypsnvfisf
      121 dissndhvic agtekvddda llvfwdarin sqdlstakep lgaysethsd ditqvcfhps
      181 npnmvvsgst dglvnvfdis adneddalvt tcnsvssvsf igwsgkdykq iycmthdegf
      241 cwwdlnhldt depitclnip dvrevikvke gnldyliggl yhektdklfv vggtntgiih
      301 imscmtsglv hvtslqggha aivrsfcwnm qddslltgge daqlllwkpg avektftkkd
      361 smkiassvyq rvrvhsndsy kkrkrq
//
LOCUS       XP_061012903             467 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            epsilon isoform isoform X1 [Dama dama].
ACCESSION   XP_061012903
VERSION     XP_061012903.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156920.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..467
                     /product="serine/threonine-protein phosphatase 2A 56 kDa
                     regulatory subunit epsilon isoform isoform X1"
                     /calculated_mol_wt=54568
     Region          2..>67
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); cl27532"
                     /db_xref="CDD:474937"
     Region          55..435
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); pfam01603"
                     /db_xref="CDD:460264"
     CDS             1..467
                     /gene="PPP2R5E"
                     /coded_by="XM_061156920.1:443..1846"
                     /db_xref="GeneID:133066139"
ORIGIN      
        1 mssapttpps vdkvdgfsrk svrkarqkrs qsssqfrsqg kpieltplpl lkdvpsseqp
       61 elflkklqqc cvifdfmdtl sdlkmkeykr stlnelvdyi tisrgclteq typevvrmvs
      121 cnifrtlpps dsnefdpeed eptleaswph lqlvyeffir flesqefqps iakkyidqkf
      181 vlqllelfds edprerdylk tvlhriygkf lglrafirkq inniflrfvy etehfngvae
      241 lleilgsiin gfalplkaeh kqflvkvlip lhtvrslslf haqlaycivq flekdpslte
      301 pvirglmkfw pktcsqkevm flgeleeild viepsqfvki qeplfkqiak cvssphfqva
      361 eralyywnne yimslieens nvilpimfss lyriskehwn paivalvynv lkafmemnst
      421 mfdeltatyk sdrqrekkke kereelwkkl edlelkrglr rdgiipt
//
LOCUS       XP_061012904             467 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            epsilon isoform isoform X1 [Dama dama].
ACCESSION   XP_061012904
VERSION     XP_061012904.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156921.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..467
                     /product="serine/threonine-protein phosphatase 2A 56 kDa
                     regulatory subunit epsilon isoform isoform X1"
                     /calculated_mol_wt=54568
     Region          2..>67
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); cl27532"
                     /db_xref="CDD:474937"
     Region          55..435
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); pfam01603"
                     /db_xref="CDD:460264"
     CDS             1..467
                     /gene="PPP2R5E"
                     /coded_by="XM_061156921.1:440..1843"
                     /db_xref="GeneID:133066139"
ORIGIN      
        1 mssapttpps vdkvdgfsrk svrkarqkrs qsssqfrsqg kpieltplpl lkdvpsseqp
       61 elflkklqqc cvifdfmdtl sdlkmkeykr stlnelvdyi tisrgclteq typevvrmvs
      121 cnifrtlpps dsnefdpeed eptleaswph lqlvyeffir flesqefqps iakkyidqkf
      181 vlqllelfds edprerdylk tvlhriygkf lglrafirkq inniflrfvy etehfngvae
      241 lleilgsiin gfalplkaeh kqflvkvlip lhtvrslslf haqlaycivq flekdpslte
      301 pvirglmkfw pktcsqkevm flgeleeild viepsqfvki qeplfkqiak cvssphfqva
      361 eralyywnne yimslieens nvilpimfss lyriskehwn paivalvynv lkafmemnst
      421 mfdeltatyk sdrqrekkke kereelwkkl edlelkrglr rdgiipt
//
LOCUS       XP_061012905             462 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            epsilon isoform isoform X2 [Dama dama].
ACCESSION   XP_061012905
VERSION     XP_061012905.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156922.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..462
                     /product="serine/threonine-protein phosphatase 2A 56 kDa
                     regulatory subunit epsilon isoform isoform X2"
                     /calculated_mol_wt=53912
     Region          2..>67
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); cl27532"
                     /db_xref="CDD:474937"
     Region          55..430
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); pfam01603"
                     /db_xref="CDD:460264"
     CDS             1..462
                     /gene="PPP2R5E"
                     /coded_by="XM_061156922.1:443..1831"
                     /db_xref="GeneID:133066139"
ORIGIN      
        1 mssapttpps vdkvdgfsrk svrkarqkrs qsssqfrsqg kpieltplpl lkdvpsseqp
       61 elflkklqqc cvifdfmdtl sdlkmkeykr stlnelvdyi tisrgclteq typevvrmvs
      121 cnifrtlpps dsnefdpeed eptleaswph lqlvyeffir flesqefqps iakkyidqkf
      181 vlqllelfds edprerdylk tvlhriygkf lglrafirkq inniflrfvy etehfngvae
      241 lleilgsiin gfalplkaeh kqflvkvlip lhtvrslslf haqlaycivq flekdpslte
      301 pvirglmkfw pktcsqkevm flgeleeild viepsqfvki qeplfkqiak cvssphfqva
      361 eralyywnne yimslieens nvilpimfss lyriskehwn paivalvynv lkafmemnst
      421 mfdeltatyn ekkkekeree lwkkledlel krglrrdgii pt
//
LOCUS       XP_061012906             236 aa            linear   MAM 02-DEC-2023
DEFINITION  rho-related GTP-binding protein RhoJ [Dama dama].
ACCESSION   XP_061012906
VERSION     XP_061012906.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156923.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..236
                     /product="rho-related GTP-binding protein RhoJ"
                     /calculated_mol_wt=25842
     Region          44..217
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            50..57
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206648"
     Site            order(52..58,100,155..156,158,198..200)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206648"
     Site            75
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            78..80
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            97..100
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            order(99..100,116..117)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     Site            155..158
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            198..200
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     CDS             1..236
                     /gene="RHOJ"
                     /coded_by="XM_061156923.1:406..1116"
                     /db_xref="GeneID:133066140"
ORIGIN      
        1 mgfgrsgrsn nhstdtaaga asmncqegne sscgcgghee kkmlkcvvvg dgavgktcll
       61 msyandafpe eyvptvfdhy avtvtvggkq hllglydtag qedynqlrpl sypntdvfli
      121 cfsvvnpasy hnvqeewvpe lkdcmphvpy vligtqidlr ddpktlarll ymkekpltye
      181 hgvklakaig aqcylecsal tqkglkavfd eailtifhpk kkkkhcsqch nccsii
//
LOCUS       XP_061012907             371 aa            linear   MAM 02-DEC-2023
DEFINITION  snRNA-activating protein complex subunit 1 [Dama dama].
ACCESSION   XP_061012907
VERSION     XP_061012907.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156924.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..371
                     /product="snRNA-activating protein complex subunit 1"
                     /calculated_mol_wt=43691
     Region          7..191
                     /region_name="SNAPC1"
                     /note="Small nuclear RNA activating complex (SNAPc),
                     subunit 1; pfam09808"
                     /db_xref="CDD:430842"
     CDS             1..371
                     /gene="SNAPC1"
                     /coded_by="XM_061156924.1:68..1183"
                     /db_xref="GeneID:133066142"
ORIGIN      
        1 mgapaglkdd ceallsrfqe mdsvrfedft elwrsmkfgt ifcgrmrnle kntftkealt
       61 sawryflppy tfqirvgaly llyglyntql cqpkqkirva lkdwdeilkf qqdlinaqhf
      121 daayifrrlr ldrafhftam pkllsyrmkk kmqrteitee fkdpndrvmk litsdvleem
      181 mnvhdhyqrm khvisadksn pekslnlikd dffdnikniv lehqqwhkdr knpplklkvk
      241 ggeekserns qqsercerae slakikskaf svvaqasksr rhrqvkvdfs dsessqvqtk
      301 ttrkrrnkqt lkpagrkvss rdrgdmqnlh kedkslslsm pvvteedeen esfsetefta
      361 pkrkrrqrtk s
//
LOCUS       XP_061012908             823 aa            linear   MAM 02-DEC-2023
DEFINITION  hypoxia-inducible factor 1-alpha [Dama dama].
ACCESSION   XP_061012908
VERSION     XP_061012908.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156925.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..823
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..823
                     /product="hypoxia-inducible factor 1-alpha"
                     /calculated_mol_wt=91911
     Region          13..83
                     /region_name="bHLH-PAS_HIF1a_PASD8"
                     /note="basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS)
                     domain found in hypoxia-inducible factor 1-alpha (HIF1a)
                     and similar proteins; cd19727"
                     /db_xref="CDD:381570"
     Site            order(18..19,21..23,26..27,29..30,55..56)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381570"
     Site            order(32..33,35..36,39..40,43..44,55..57,60..61,64,67..68,
                     71)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381570"
     Region          93..148
                     /region_name="PAS"
                     /note="PAS domain; smart00091"
                     /db_xref="CDD:214512"
     Region          254..339
                     /region_name="PAS_3"
                     /note="PAS fold; pfam08447"
                     /db_xref="CDD:430001"
     Site            order(255,259,265,278..281,307,312)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238075"
     Site            order(275,279,287,290..291,319,321)
                     /site_type="other"
                     /note="heme pocket [chemical binding]"
                     /db_xref="CDD:238075"
     Region          551..581
                     /region_name="HIF-1"
                     /note="Hypoxia-inducible factor-1; pfam11413"
                     /db_xref="CDD:463274"
     Region          786..822
                     /region_name="HIF-1a_CTAD"
                     /note="HIF-1 alpha C terminal transactivation domain;
                     pfam08778"
                     /db_xref="CDD:430212"
     CDS             1..823
                     /gene="HIF1A"
                     /coded_by="XM_061156925.1:307..2778"
                     /db_xref="GeneID:133066144"
ORIGIN      
        1 megaggandk kkisserrke ksrdaarsrr skesevfyel ahqlplphnv sshldkasvm
       61 rltisylrvr klldagdldi edemkaqmnc fylkaldgfv mvltddgdmi yisdnvnkym
      121 gltqfeltgh svfdfthpcd heemremlth rnglvkkgke qntqrsfflr mkctltsrgr
      181 tmniksatwk vlhctghihv ydtnsnqsqc gykkppmtcl vlicepiphp snieipldsk
      241 tflsrhsldm kfsycderit elmgyepeel lgrsiyeyyh aldsdhltkt hhdmftkgqv
      301 ttgqyrmlak rggyvwietq atviyntkns qpqcivcvny vvsgiiqhdl ifslqqtecv
      361 lkpvessdmk mtqlftkves edtsslfdkl kkepdaltll apaagdtiis ldfgsndtet
      421 ddqqleevpl yndvmlpssn eklqninlam splpasetpk plrssadpal nqevalklep
      481 npeslelsft mpqiqdqpas psdgstrqss pepnspseyc fdvdsdmvne fklelveklf
      541 aedteaknpf stqdtdldle mlapyipmdd dfqlrsfdql splensstsp psastntvfq
      601 ptqmqeppia satttatnde lktvtkdgme dikiliafps pphvpkeppc attspysdtg
      661 srtaspsrag kgvieqteks hprspnvlsv alsqrttape eelnpkilal qnaqrkrkie
      721 hdgslfqavg igtllqqpdd ratttslswk rvkgcksseq ngmeqktiil ipsdlacrll
      781 gqsmdesglp qltsydcevn apvqgsrnll qgeellrald qvn
//
LOCUS       XP_061012909             683 aa            linear   MAM 02-DEC-2023
DEFINITION  protein kinase C eta type [Dama dama].
ACCESSION   XP_061012909
VERSION     XP_061012909.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156926.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..683
                     /product="protein kinase C eta type"
                     /calculated_mol_wt=77645
     Region          8..140
                     /region_name="C2_PKC_epsilon"
                     /note="C2 domain in Protein Kinase C (PKC) epsilon;
                     cd04014"
                     /db_xref="CDD:175981"
     Site            order(42,89,95)
                     /site_type="metal-binding"
                     /note="metal binding pocket [ion binding]"
                     /db_xref="CDD:175981"
     Region          166..226
                     /region_name="C1_nPKC_epsilon-like_rpt1"
                     /note="first protein kinase C conserved region 1 (C1
                     domain) found in novel protein kinase C (nPKC) epsilon,
                     eta, and similar proteins; cd20835"
                     /db_xref="CDD:410385"
     Site            order(177..183,191..195,199)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410385"
     Region          244..298
                     /region_name="C1_nPKC_epsilon-like_rpt2"
                     /note="second protein kinase C conserved region 1 (C1
                     domain) found in novel protein kinase C (nPKC) epsilon,
                     eta, and similar proteins; cd20838"
                     /db_xref="CDD:410388"
     Site            order(251..257,265..269,272)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410388"
     Region          359..681
                     /region_name="STKc_nPKC_eta"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Novel Protein Kinase C eta; cd05590"
                     /db_xref="CDD:270742"
     Site            order(361..365,369,382,384,417,433..434,436,440,442,479,
                     481,483..484,486,496..497,500,514..519,546,552,555)
                     /site_type="active"
                     /db_xref="CDD:270742"
     Site            order(361..365,369,382,384,417,434..436,440,479,481,
                     483..484,486,496..497)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270742"
     Site            order(365,440,442,479,481,483,500,514..519,546,552,555)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270742"
     Site            496..519
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270742"
     Site            656
                     /site_type="other"
                     /note="turn motif phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:270742"
     Site            671..676
                     /site_type="other"
                     /note="hydrophobic motif (HM)"
                     /db_xref="CDD:270742"
     CDS             1..683
                     /gene="PRKCH"
                     /coded_by="XM_061156926.1:443..2494"
                     /db_xref="GeneID:133066145"
ORIGIN      
        1 mssgtmkfng ylrvrigeav glqptrwslr hslfkkgyql ldpyltvsvd qvrvgqtstk
       61 qktnkptyne efcanvtdgg hlelavfhet plgydhfvan ctlqfqellr tagasdtfeg
      121 wvdlepegkv fvvitltgsf teatlqrdri fkhftrkrqr amrrrvhqin ghkfmatylr
      181 qptycshcre fiwgvfgkqg yqcqvctcvv hkrchhlivt actcqnnink vdsktaeqrf
      241 giniphkfsv hnykvptfcd hcgsllwgim rqglqckick mnvhircqan vapncgvnav
      301 elaktlagmg lqpgnispts klvsrstlrr qgkestkegn gigvnssnrl gidnfefirv
      361 lgkgsfgkvm lariketgdl yavkvlkkdv ilqdddvect mtekrilsla rnhpfltqlf
      421 ccfqtpdrlf fvmefvnggd lmfhiqksrr fdeararfya aeiisalmfl hdkgiiyrdl
      481 kldnvlldhe ghckladfgm ckegicngvt tatfcgtpdy iapeilqeml ygpavdwwam
      541 gvllyemlcg hapfeaened dlfeailnde vvyptwlhed atgilksfmt knptmrlgsp
      601 sqggehailr hpffkeidwa qlnhrqvepp frpriksred vsnfdpdfik eepvltpide
      661 ghlpminqde frnfsfvspe lhp
//
LOCUS       XP_061012910             353 aa            linear   MAM 02-DEC-2023
DEFINITION  cell cycle control protein 50B [Dama dama].
ACCESSION   XP_061012910
VERSION     XP_061012910.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156927.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..353
                     /product="cell cycle control protein 50B"
                     /calculated_mol_wt=39090
     Region          53..342
                     /region_name="CDC50"
                     /note="LEM3 (ligand-effect modulator 3) family / CDC50
                     family; pfam03381"
                     /db_xref="CDD:460906"
     CDS             1..353
                     /gene="TMEM30B"
                     /coded_by="XM_061156927.1:148..1209"
                     /db_xref="GeneID:133066146"
ORIGIN      
        1 mtwsatarga hqpdntaftq qrlpawhpll sasialplff caglafiglg lglyyssngi
       61 telaydytgd sgtgncsvca tagqgrappp pcscawyfsl pelfqgpvyl yyeltnfyqn
      121 nrrygvsrdd sqlsglptsl rhpvnecapy qysaaglpia pcgaianslf ndsfslwhqr
      181 qpngpyvevp ldrtgiawwt dyhvkfrnpp lvngslalaf qgtapppnwh rpvyelspdp
      241 nntgfinqdf vvwmrtaalp tfrklyarir qgnysaglpr gayrvnityn ypvrafsghk
      301 clifssiswm ggknpflgia yllvgslcil vgfvmlavyi ryqdqnddee dde
//
LOCUS       XP_061012912             497 aa            linear   MAM 02-DEC-2023
DEFINITION  tRNA (guanine(37)-N1)-methyltransferase [Dama dama].
ACCESSION   XP_061012912
VERSION     XP_061012912.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156929.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..497
                     /product="tRNA (guanine(37)-N1)-methyltransferase"
                     /calculated_mol_wt=56635
     Region          197..418
                     /region_name="Met_10"
                     /note="Met-10+ like-protein; pfam02475"
                     /db_xref="CDD:396850"
     CDS             1..497
                     /gene="TRMT5"
                     /coded_by="XM_061156929.1:126..1619"
                     /db_xref="GeneID:133066148"
ORIGIN      
        1 mrsllkqfgf srrllkvgsc ritesaslil lpwasliqtl srapviflld qrkrfstmpe
       61 ietnhrdsel fsppsdvrgm teldrtafkk tvtipvlkvr keivnklmqs lkraalqrpg
      121 ikrviedped eegrlimldp ykmftvdsfe keelsilkql nvnpqiskyn leltyenfks
      181 eeilravlpe gqdvtsgfsr vghiahlnlr dhqlpykhli gqvmidknpg itsavnkinn
      241 idntyrnfqm evlsgeenmm tkvrennyiy efdfskvywn prlstehsri tellkpgdvl
      301 fdvfagvgpf aipaakknct vfandlnpes hkwllhnckl nkvnqkvkvf nldgkdflqg
      361 pvreelmqql gplskerkhs vhivmnlpak aiefistfka lldgqpcgse llptvhcysf
      421 skdanpakdv qqragtvlgi sleacssvhl vrnvapnkem lcitfripaa ilyknqtvnr
      481 dnhedpplkr qrtdkdl
//
LOCUS       XP_061012913             456 aa            linear   MAM 02-DEC-2023
DEFINITION  solute carrier family 38 member 6 isoform X1 [Dama dama].
ACCESSION   XP_061012913
VERSION     XP_061012913.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156930.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..456
                     /product="solute carrier family 38 member 6 isoform X1"
                     /calculated_mol_wt=50479
     Region          43..451
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
     CDS             1..456
                     /gene="SLC38A6"
                     /coded_by="XM_061156930.1:106..1476"
                     /db_xref="GeneID:133066149"
ORIGIN      
        1 mevpagvina epgwfvstre peeaeaeess pllsnevhtq rsrgasfgfs vfnlmnaimg
       61 sgilglayvm ahtgilgfsf lllivallas ysvhlllslc iqtavtsyed lglfafglpg
      121 kvmvastiii qnigamssyl liiktelpat iseflsgdys gswyldgdtl llivcvgivf
      181 plallpkigf lgytsslsff fmvffalvvi ikkwsipcpl tlnyaeqyfq isnatddckp
      241 klfhfskesa yaiptmafsf lchtsilpiy celqspskkr mqnvtntaia lsfliyfvsa
      301 lfgyltfyds vasellqgys kylphdvvim tvklcilfsv lltvplihfp arkalmmmff
      361 snfpfswirh slitlalnii ivllaiyvpd irnvfgivgs ststclifvf pglfylkmsr
      421 edflswkklg afvllifgil vgnfslalii fnwink
//
LOCUS       XP_061012914             402 aa            linear   MAM 02-DEC-2023
DEFINITION  solute carrier family 38 member 6 isoform X2 [Dama dama].
ACCESSION   XP_061012914
VERSION     XP_061012914.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156931.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..402
                     /product="solute carrier family 38 member 6 isoform X2"
                     /calculated_mol_wt=44603
     Region          2..397
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
     CDS             1..402
                     /gene="SLC38A6"
                     /coded_by="XM_061156931.1:178..1386"
                     /db_xref="GeneID:133066149"
ORIGIN      
        1 mnaimgsgil glayvmahtg ilgfsfllli vallasysvh lllslciqta vtsyedlglf
       61 afglpgkvmv astiiiqnig amssylliik telpatisef lsgdysgswy ldgdtllliv
      121 cvgivfplal lpkigflgyt sslsfffmvf falvviikkw sipcpltlny aeqyfqisna
      181 tddckpklfh fskesayaip tmafsflcht silpiycelq spskkrmqnv tntaialsfl
      241 iyfvsalfgy ltfydsvase llqgyskylp hdvvimtvkl cilfsvlltv plihfparka
      301 lmmmffsnfp fswirhslit lalniiivll aiyvpdirnv fgivgsstst clifvfpglf
      361 ylkmsredfl swkklgafvl lifgilvgnf slaliifnwi nk
//
LOCUS       XP_061012915             402 aa            linear   MAM 02-DEC-2023
DEFINITION  solute carrier family 38 member 6 isoform X2 [Dama dama].
ACCESSION   XP_061012915
VERSION     XP_061012915.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156932.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..402
                     /product="solute carrier family 38 member 6 isoform X2"
                     /calculated_mol_wt=44603
     Region          2..397
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
     CDS             1..402
                     /gene="SLC38A6"
                     /coded_by="XM_061156932.1:202..1410"
                     /db_xref="GeneID:133066149"
ORIGIN      
        1 mnaimgsgil glayvmahtg ilgfsfllli vallasysvh lllslciqta vtsyedlglf
       61 afglpgkvmv astiiiqnig amssylliik telpatisef lsgdysgswy ldgdtllliv
      121 cvgivfplal lpkigflgyt sslsfffmvf falvviikkw sipcpltlny aeqyfqisna
      181 tddckpklfh fskesayaip tmafsflcht silpiycelq spskkrmqnv tntaialsfl
      241 iyfvsalfgy ltfydsvase llqgyskylp hdvvimtvkl cilfsvlltv plihfparka
      301 lmmmffsnfp fswirhslit lalniiivll aiyvpdirnv fgivgsstst clifvfpglf
      361 ylkmsredfl swkklgafvl lifgilvgnf slaliifnwi nk
//
LOCUS       XP_061012916             379 aa            linear   MAM 02-DEC-2023
DEFINITION  solute carrier family 38 member 6 isoform X3 [Dama dama].
ACCESSION   XP_061012916
VERSION     XP_061012916.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156933.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..379
                     /product="solute carrier family 38 member 6 isoform X3"
                     /calculated_mol_wt=42129
     Region          30..374
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
     CDS             1..379
                     /gene="SLC38A6"
                     /coded_by="XM_061156933.1:428..1567"
                     /db_xref="GeneID:133066149"
ORIGIN      
        1 meehvaased pggsdnkest ckagdlavts yedlglfafg lpgkvmvast iiiqnigams
       61 sylliiktel patiseflsg dysgswyldg dtlllivcvg ivfplallpk igflgytssl
      121 sfffmvffal vviikkwsip cpltlnyaeq yfqisnatdd ckpklfhfsk esayaiptma
      181 fsflchtsil piycelqsps kkrmqnvtnt aialsfliyf vsalfgyltf ydsvasellq
      241 gyskylphdv vimtvklcil fsvlltvpli hfparkalmm mffsnfpfsw irhslitlal
      301 niiivllaiy vpdirnvfgi vgsststcli fvfpglfylk msredflswk klgafvllif
      361 gilvgnfsla liifnwink
//
LOCUS       XP_061012917             309 aa            linear   MAM 02-DEC-2023
DEFINITION  CDK-activating kinase assembly factor MAT1 [Dama dama].
ACCESSION   XP_061012917
VERSION     XP_061012917.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156934.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..309
                     /product="CDK-activating kinase assembly factor MAT1"
                     /calculated_mol_wt=35604
     Region          1..309
                     /region_name="cdk7"
                     /note="CDK-activating kinase assembly factor MAT1;
                     TIGR00570"
                     /db_xref="CDD:129661"
     CDS             1..309
                     /gene="MNAT1"
                     /coded_by="XM_061156934.1:119..1048"
                     /db_xref="GeneID:133066150"
ORIGIN      
        1 mddqgcprck ttkyrnpslk lmvnvcghtl cescvdllfv rgagncpecg tplrksnfrv
       61 qlfedptvdk eveirkkvlk iynkreedfp slreyndfle eveeivfnlt nnvdldntkk
      121 kmeiyqkenk dviqknklkl treqeeleea leverqeneq rrlfiqkeeq mqqilkrknk
      181 qalldeless dlpvalllaq hkdrstqlem qiekpkpikp gtfstgikmg qhislapiqk
      241 leealyeyqp lqietcgpqv pefemlgrlg ylnhvraasp qdlaggytss lachralqda
      301 fsglfwqps
//
LOCUS       XP_061012918             790 aa            linear   MAM 02-DEC-2023
DEFINITION  homeobox protein SIX4 [Dama dama].
ACCESSION   XP_061012918
VERSION     XP_061012918.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156935.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..790
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..790
                     /product="homeobox protein SIX4"
                     /calculated_mol_wt=83352
     Region          116..225
                     /region_name="SIX1_SD"
                     /note="Transcriptional regulator, SIX1, N-terminal SD
                     domain; pfam16878"
                     /db_xref="CDD:465293"
     Region          236..290
                     /region_name="homeodomain"
                     /note="Homeodomain; DNA binding domains involved in the
                     transcriptional regulation of key eukaryotic developmental
                     processes; may bind to DNA as monomers or as homo- and/or
                     heterodimers, in a sequence-specific manner; cd00086"
                     /db_xref="CDD:238039"
     Site            order(237,277,280..281,284)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     CDS             1..790
                     /gene="SIX4"
                     /coded_by="XM_061156935.1:1..2373"
                     /db_xref="GeneID:133066153"
ORIGIN      
        1 mssssptgqi asaadikqen gmesasegqe aprevaggaa aaaaglsppa papfplepgd
       61 taaaaarvsg eegavaaaaa aagaavdqvq lhsellgrhh haaaaaaaaa qtplafspdh
      121 vacvcealqq ggnldrlarf lwslpqsdll rgnesllkar alvafhqgiy pelysilesh
      181 sfesanhpll qqlwykaryt eaerargrpl gavdkyrlrr kfplprtiwd geetvycfke
      241 ksrnalkely kqnrypspae krhlakitgl sltqvsnwfk nrrqrdrnps etqsksesdg
      301 npstedessk ghedlsphql sgssdgvtnl slsshlepvy mqqignakis lsssgvllng
      361 slvpastspv flngnsfiqg pngvilngls vgntqtvsln ppkmasnims ngismtdilg
      421 stsqdvkefk vlqsssansa attsyspsap vsfpglipsa evkregiqtv asqdggsvvt
      481 fttpvqinqy givqipssga nsqflngsig fsplqlppvs vaasqgnisv nsstsdgstf
      541 tsesatvqqg kvflsslaps avvytvpnsg qtigsvkqeg verslvfsql mpvnqnaqvn
      601 tnlssesisg sglhplsssl vnvspthnfs ltsptllnpt elnpdiadsq pmsapvasks
      661 tvtsvnnany atlqncslis gqdllsvpms qaalgeivpp gedqvghpsp tvhqdfvreh
      721 hlvmqsvani kenfltnses kttsnlmmld skskyvldgm vetvcedlet dkkelaklqt
      781 vqldedmqdl
//
LOCUS       XP_061012919             284 aa            linear   MAM 02-DEC-2023
DEFINITION  homeobox protein SIX1 [Dama dama].
ACCESSION   XP_061012919
VERSION     XP_061012919.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156936.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..284
                     /product="homeobox protein SIX1"
                     /calculated_mol_wt=32053
     Region          9..118
                     /region_name="SIX1_SD"
                     /note="Transcriptional regulator, SIX1, N-terminal SD
                     domain; pfam16878"
                     /db_xref="CDD:465293"
     Region          129..180
                     /region_name="homeodomain"
                     /note="Homeodomain; DNA binding domains involved in the
                     transcriptional regulation of key eukaryotic developmental
                     processes; may bind to DNA as monomers or as homo- and/or
                     heterodimers, in a sequence-specific manner; cd00086"
                     /db_xref="CDD:238039"
     Site            order(130,170,173..174,177)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     CDS             1..284
                     /gene="SIX1"
                     /coded_by="XM_061156936.1:266..1120"
                     /db_xref="GeneID:133066154"
ORIGIN      
        1 msmlpsfgft qeqvacvcev lqqggnlerl grflwslpac dhlhknesvl kakavvafhr
       61 gnfrelykil eshqfsphnh pklqqlwlka hyveaeklrg rplgavgkyr vrrkfplprt
      121 iwdgeetsyc fkeksrgvlr ewyahnpyps prekrelaea tgltttqvsn wfknrrqrdr
      181 aaeakerent ennnsssnkq nqlspleggk plmssseeef sppqspdqns vlllqgnmgh
      241 arssnyslpg ltasqsahsl qahqhqlqds llgpltsslv dlgs
//
LOCUS       XP_061012920             391 aa            linear   MAM 02-DEC-2023
DEFINITION  protein phosphatase 1A isoform X1 [Dama dama].
ACCESSION   XP_061012920
VERSION     XP_061012920.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156937.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..391
                     /product="protein phosphatase 1A isoform X1"
                     /calculated_mol_wt=43542
     Region          32..300
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cd00143"
                     /db_xref="CDD:238083"
     Site            order(42,46..47,69..71,248,291)
                     /site_type="active"
                     /db_xref="CDD:238083"
     Region          294..372
                     /region_name="PP2C_C"
                     /note="Protein serine/threonine phosphatase 2C, C-terminal
                     domain; pfam07830"
                     /db_xref="CDD:429684"
     CDS             1..391
                     /gene="PPM1A"
                     /coded_by="XM_061156937.1:145..1320"
                     /db_xref="GeneID:133066155"
ORIGIN      
        1 mrdlenqdim gafldkpkme khnaqgqgng lryglssmqg wrvemedaht aviglpsgle
       61 twsffavydg hagsqvakyc cehlldhitn nqdfkgsaga psvenvkngi rtgfleideh
      121 mrvmsekkhg vdrsgstavg vlispqhtyf incgdsrgll crnrkvyfft qdhkpsnple
      181 keriqnaggs vmiqrvngsl avsralgdfd ykcvhgkgpt eqlvspepev hdierseedd
      241 qfiilacdgi wdvmgneelc dfvrsrlevt ddlekvcnev vdtclykgsr dnmsvilicf
      301 pnapkvspea vkkeeeldky lesrveeiik kqgegvpdlv hvmrtlasen ipslppggel
      361 askrnvieav ynrlnpyknd dtdststddm w
//
LOCUS       XP_061012921             382 aa            linear   MAM 02-DEC-2023
DEFINITION  protein phosphatase 1A isoform X2 [Dama dama].
ACCESSION   XP_061012921
VERSION     XP_061012921.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156938.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..382
                     /product="protein phosphatase 1A isoform X2"
                     /calculated_mol_wt=42427
     Region          23..291
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cd00143"
                     /db_xref="CDD:238083"
     Site            order(33,37..38,60..62,239,282)
                     /site_type="active"
                     /db_xref="CDD:238083"
     Region          285..363
                     /region_name="PP2C_C"
                     /note="Protein serine/threonine phosphatase 2C, C-terminal
                     domain; pfam07830"
                     /db_xref="CDD:429684"
     CDS             1..382
                     /gene="PPM1A"
                     /coded_by="XM_061156938.1:418..1566"
                     /db_xref="GeneID:133066155"
ORIGIN      
        1 mgafldkpkm ekhnaqgqgn glryglssmq gwrvemedah taviglpsgl etwsffavyd
       61 ghagsqvaky ccehlldhit nnqdfkgsag apsvenvkng irtgfleide hmrvmsekkh
      121 gvdrsgstav gvlispqhty fincgdsrgl lcrnrkvyff tqdhkpsnpl ekeriqnagg
      181 svmiqrvngs lavsralgdf dykcvhgkgp teqlvspepe vhdierseed dqfiilacdg
      241 iwdvmgneel cdfvrsrlev tddlekvcne vvdtclykgs rdnmsvilic fpnapkvspe
      301 avkkeeeldk ylesrveeii kkqgegvpdl vhvmrtlase nipslppgge laskrnviea
      361 vynrlnpykn ddtdststdd mw
//
LOCUS       XP_061012923            1194 aa            linear   MAM 02-DEC-2023
DEFINITION  pecanex-like protein 4 isoform X1 [Dama dama].
ACCESSION   XP_061012923
VERSION     XP_061012923.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156940.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1194
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1194
                     /product="pecanex-like protein 4 isoform X1"
                     /calculated_mol_wt=133812
     CDS             1..1194
                     /gene="PCNX4"
                     /coded_by="XM_061156940.1:646..4230"
                     /db_xref="GeneID:133066157"
ORIGIN      
        1 mspdvpllnd ykqdfflkrf pqtvlggprl klgycappyi yvnqivlflv pwvlggigtl
       61 lyqlgiledy ytaalsgglm lftafviqft ssyarnksvt vermlttdil aeedeheftd
      121 cagaetikfl ipgkkhtani vfhsvtagll cglgtwyllp nritllygnv ggtvvlfvfg
      181 wmtlcigeys livntptesa tfqtqdtyei tplmrpvyif ffisvdlahr fmvnipaleq
      241 mnqilhilfi flpffwalgt lpppdalflw aveqvlefgl ggssmsthlr llimfiisag
      301 tavasyfips tvgvvlfmtg lgfllslnls emvlvfkhsv trhrvgtksn alssgseirf
      361 twreylfysi vlvlalletg llhhfasfsq isknspqavv gytlmilfii lwilkeiqsv
      421 yifgifrnpf ypkdvqtvtl flekqtklmk igvvrrilin lvspfamiaf lsldsslqrl
      481 hsvsvsigft rafrmvwqnt etalletviv aavhllsssa dmwwsrsldt giklllvgim
      541 rdrliqfiak lkfavtvlva swtekkrrks tttlgvlniv fspfvlvviv fstllsspll
      601 plftlplflv gfprpvqswp gvvgttacvc adtvyycqmv pglitalqsa vaagslglll
      661 pgshylgrfq drliwimile cgytyccvni kglelqetsc htaearrvde vfesafeqee
      721 yvklcsineh fgnvltpctv lpvklysdar nvlsgiidsh dnlkefkgdl vkvllwilvq
      781 ycsrrssmle nahktenkgk asliilpaln tepqtesped tdslnsenld dwsddvfgee
      841 ptikkgkdek dqlkvlpgin lpipgsvesq nigshsintv teeslyqava lgypaidkgk
      901 qeamayiplm efscshshll slpeewmsnc lpnskmkems slfpedwyqf ilmqlecfps
      961 kenasnvgee iakdrvlkdl yvrtvmtcyf slfgvdnmip spghilrvys gvlpwslald
     1021 wltekpdlfq lalkafrytl klmidkaslg pvedfkglin cleeyesdwy iglvsdekwk
     1081 eavlqekpyl fslgydpnmg vytgrvltlq ellihvgkln aeavrdgtcr edpdsgwlsh
     1141 ccvpsaqhrg qhkqvfrkhl llfavcsirh etapqgclif agtaqltlte vtvk
//
LOCUS       XP_061012924            1182 aa            linear   MAM 02-DEC-2023
DEFINITION  pecanex-like protein 4 isoform X2 [Dama dama].
ACCESSION   XP_061012924
VERSION     XP_061012924.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156941.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1182
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1182
                     /product="pecanex-like protein 4 isoform X2"
                     /calculated_mol_wt=132710
     Region          <1035..1174
                     /region_name="Pecanex_C"
                     /note="Pecanex protein (C-terminus); pfam05041"
                     /db_xref="CDD:461533"
     CDS             1..1182
                     /gene="PCNX4"
                     /coded_by="XM_061156941.1:643..4191"
                     /db_xref="GeneID:133066157"
ORIGIN      
        1 mspdvpllnd ykqdfflkrf pqtvlggprl klgycappyi yvnqivlflv pwvlggigtl
       61 lyqlgiledy ytaalsgglm lftafviqft ssyarnksvt vermlttdil aeedeheftd
      121 cagaetikfl ipgkkhtani vfhsvtagll cglgtwyllp nritllygnv ggtvvlfvfg
      181 wmtlcigeys livntptesa tfqtqdtyei tplmrpvyif ffisvdlahr fmvnipaleq
      241 mnqilhilfi flpffwalgt lpppdalflw aveqvlefgl ggssmsthlr llimfiisag
      301 tavasyfips tvgvvlfmtg lgfllslnls emvlvfkhsv trhrvgtksn alssgseirf
      361 twreylfysi vlvlalletg llhhfasfsq isknspqavv gytlmilfii lwilkeiqsv
      421 yifgifrnpf ypkdvqtvtl flekqtklmk igvvrrilin lvspfamiaf lsldsslqrl
      481 hsvsvsigft rafrmvwqnt etalletviv aavhllsssa dmwwsrsldt giklllvgim
      541 rdrliqfiak lkfavtvlva swtekkrrks tttlgvlniv fspfvlvviv fstllsspll
      601 plftlplflv gfprpvqswp gvvgttacvc adtvyycqmv pglitalqsa vaagslglll
      661 pgshylgrfq drliwimile cgytyccvni kglelqetsc htaearrvde vfesafeqee
      721 yvklcsineh fgnvltpctv lpvklysdar nvlsgiidsh dnlkefkgdl vkvllwilvq
      781 ycsrrssmle nahktenkgk asliilpaln tepqtesped tdslnsenld dwsddvfgee
      841 ptikkgkdek dqlkvlpgin lpipgsvesq nigshsintv teeslyqava lgypaidkgk
      901 qeamayiplm efscshshll slpeewmsnc lpnskmkems slfpedwyqf ilmqlecfps
      961 kenasnvgee iakdrvlkdl yvrtvmtcyf slfgvdnmip spghilrvys gvlpwslald
     1021 wltekpdlfq lalkafrytl klmidkaslg pvedfkglin cleeyesdwy iglvsdekwk
     1081 eavlqekpyl fslgydpnmg vytgrvltlq ellihvgkln aeavrgqwan lswellyatn
     1141 ddeerysiqa hplllrnltv qaadpplgyp iysskplhih lv
//
LOCUS       XP_061012925            1166 aa            linear   MAM 02-DEC-2023
DEFINITION  pecanex-like protein 4 isoform X3 [Dama dama].
ACCESSION   XP_061012925
VERSION     XP_061012925.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156942.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1166
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1166
                     /product="pecanex-like protein 4 isoform X3"
                     /calculated_mol_wt=130795
     CDS             1..1166
                     /gene="PCNX4"
                     /coded_by="XM_061156942.1:644..4144"
                     /db_xref="GeneID:133066157"
ORIGIN      
        1 mspdvpllnd ykqdfflkrf pqtvlggprl klgycappyi yvnqivlflv pwvlggigtl
       61 lyqlgiledy ytaalsgglm lftafviqft ssyarnksvt vermlttdil aeedeheftd
      121 cagaetikfl ipgkkhtani vfhsvtagll cglgtwyllp nritllygnv ggtvvlfvfg
      181 wmtlcigeys livntptesa tfqtqdtyei tplmrpvyif ffisvdlahr fmvnipaleq
      241 mnqilhilfi flpffwalgt lpppdalflw aveqvlefgl ggssmsthlr llimfiisag
      301 tavasyfips tvgvvlfmtg lgfllslnls emvlvfkhsv trhrvgtksn alssgseirf
      361 twreylfysi vlvlalletg llhhfasfsq isknspqavv gytlmilfii lwilkeiqsv
      421 yifgifrnpf ypkdvqtvtl flekqtklmk igvvrrilin lvspfamiaf lsldsslqrl
      481 hsvsvsigft rafrmvwqnt etalletviv aavhllsssa dmwwsrsldt giklllvgim
      541 rdrliqfiak lkfavtvlva swtekkrrks tttlgvlniv fspfvlvviv fstllsspll
      601 plftlplflv gfprpvqswp gvvgttacvc adtvyycqmv pglitalqsa vaagslglll
      661 pgshylgrfq drliwimile cgytyccvni kglelqetsc htaearrvde vfesafeqee
      721 yvklcsineh fgnvltpctv lpvklysdar nvlsgiidsh dnlkefkgdl vkvllwilvq
      781 ycsrrssmle nahktenkgk asliilpaln tepqtesped tdslnsenld dwsddvfgee
      841 ptikkgkdek dqlkvlpgin lpipgsvesq nigshsintv teeslyqava lgypaidkgk
      901 qeamayiplm efscshshll slpeewmsnc lpnskmkems slfpedwyqf ilmqlecfps
      961 kenasnvgee iakdrvlkdl yvrtvmtcyf slfgvdnmip spghilrvys gvlpwslald
     1021 wltekpdlfq lalkafrytl klmidkaslg pvedfkglin cleeyesdwy iglvsdekwk
     1081 eavlqekpyl fslgydpnmg vytgrvltlq ellihvgkln aeavrdgtcr edpdsgwlsh
     1141 ccvpsaqhrg qhkqsylefs ghvsrd
//
LOCUS       XP_061012926            1151 aa            linear   MAM 02-DEC-2023
DEFINITION  pecanex-like protein 4 isoform X4 [Dama dama].
ACCESSION   XP_061012926
VERSION     XP_061012926.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156943.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1151
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1151
                     /product="pecanex-like protein 4 isoform X4"
                     /calculated_mol_wt=128924
     CDS             1..1151
                     /gene="PCNX4"
                     /coded_by="XM_061156943.1:644..4099"
                     /db_xref="GeneID:133066157"
ORIGIN      
        1 mspdvpllnd ykqdfflkrf pqtvlggprl klgycappyi yvnqivlflv pwvlggigtl
       61 lyqlgiledy ytaalsgglm lftafviqft ssyarnksvt vermlttdil aeedeheftd
      121 cagaetikfl ipgkkhtani vfhsvtagll cglgtwyllp nritllygnv ggtvvlfvfg
      181 wmtlcigeys livntptesa tfqtqdtyei tplmrpvyif ffisvdlahr fmvnipaleq
      241 mnqilhilfi flpffwalgt lpppdalflw aveqvlefgl ggssmsthlr llimfiisag
      301 tavasyfips tvgvvlfmtg lgfllslnls emvlvfkhsv trhrvgtksn alssgseirf
      361 twreylfysi vlvlalletg llhhfasfsq isknspqavv gytlmilfii lwilkeiqsv
      421 yifgifrnpf ypkdvqtvtl flekqtklmk igvvrrilin lvspfamiaf lsldsslqrl
      481 hsvsvsigft rafrmvwqnt etalletviv aavhllsssa dmwwsrsldt giklllvgim
      541 rdrliqfiak lkfavtvlva swtekkrrks tttlgvlniv fspfvlvviv fstllsspll
      601 plftlplflv gfprpvqswp gvvgttacvc adtvyycqmv pglitalqsa vaagslglll
      661 pgshylgrfq drliwimile cgytyccvni kglelqetsc htaearrvde vfesafeqee
      721 yvklcsineh fgnvltpctv lpvklysdar nvlsgiidsh dnlkefkgdl vkvllwilvq
      781 ycsrrssmle nahktenkgk asliilpaln tepqtesped tdslnsenld dwsddvfgee
      841 ptikkgkdek dqlkvlpgin lpipgsvesq nigshsintv teeslyqava lgypaidkgk
      901 qeamayiplm efscshshll slpeewmsnc lpnskmkems slfpedwyqf ilmqlecfps
      961 kenasnvgee iakdrvlkdl yvrtvmtcyf slfgvdnmip spghilrvys gvlpwslald
     1021 wltekpdlfq lalkafrytl klmidkaslg pvedfkglin cleeyesdwy iglvsdekwk
     1081 eavlqekpyl fslgydpnmg vytgrvltlq ellihvgkln aeavrgstaa isdlltkals
     1141 fhpfqlmyss g
//
LOCUS       XP_061012927            1089 aa            linear   MAM 02-DEC-2023
DEFINITION  pecanex-like protein 4 isoform X5 [Dama dama].
ACCESSION   XP_061012927
VERSION     XP_061012927.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156944.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1089
                     /product="pecanex-like protein 4 isoform X5"
                     /calculated_mol_wt=122460
     CDS             1..1089
                     /gene="PCNX4"
                     /coded_by="XM_061156944.1:646..3915"
                     /db_xref="GeneID:133066157"
ORIGIN      
        1 mspdvpllnd ykqdfflkrf pqtvlggprl klgycappyi yvnqivlflv pwvlggigtl
       61 lyqlgiledy ytaalsgglm lftafviqft ssyarnksvt vermlttdil aeedeheftd
      121 cagaetikfl ipgkkhtani vfhsvtagll cglgtwyllp nritllygnv ggtvvlfvfg
      181 wmtlcigeys livntptesa tfqtqdtyei tplmrpvyif ffisvdlahr fmvnipaleq
      241 mnqilhilfi flpffwalgt lpppdalflw aveqvlefgl ggssmsthlr llimfiisag
      301 tavasyfips tvgvvlfmtg lgfllslnls emvlvfkhsv trhrvgtksn alssgseirf
      361 twreylfysi vlvlalletg llhhfasfsq isknspqavv gytlmilfii lwilkeiqsv
      421 yifgifrnpf ypkdvqtvtl flekqtklmk igvvrrilin lvspfamiaf lsldsslqrl
      481 hsvsvsigft rafrmvwqnt etalletviv aavhllsssa dmwwsrsldt giklllvgim
      541 rdrliqfiak lkfavtvlva swtekkrrks tttlgvlniv fspfvlglel qetschtaea
      601 rrvdevfesa feqeeyvklc sinehfgnvl tpctvlpvkl ysdarnvlsg iidshdnlke
      661 fkgdlvkvll wilvqycsrr ssmlenahkt enkgkaslii lpalntepqt espedtdsln
      721 senlddwsdd vfgeeptikk gkdekdqlkv lpginlpipg svesqnigsh sintvteesl
      781 yqavalgypa idkgkqeama yiplmefscs hshllslpee wmsnclpnsk mkemsslfpe
      841 dwyqfilmql ecfpskenas nvgeeiakdr vlkdlyvrtv mtcyfslfgv dnmipspghi
      901 lrvysgvlpw slaldwltek pdlfqlalka frytlklmid kaslgpvedf kglincleey
      961 esdwyiglvs dekwkeavlq ekpylfslgy dpnmgvytgr vltlqellih vgklnaeavr
     1021 dgtcredpds gwlshccvps aqhrgqhkqv frkhlllfav csirhetapq gclifagtaq
     1081 ltltevtvk
//
LOCUS       XP_061012928             339 aa            linear   MAM 02-DEC-2023
DEFINITION  dehydrogenase/reductase SDR family member 7 [Dama dama].
ACCESSION   XP_061012928
VERSION     XP_061012928.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156945.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..339
                     /product="dehydrogenase/reductase SDR family member 7"
                     /calculated_mol_wt=37930
     Region          48..308
                     /region_name="11beta-HSD1_like_SDR_c"
                     /note="11beta-hydroxysteroid dehydrogenase type 1
                     (11beta-HSD1)-like, classical (c) SDRs; cd05332"
                     /db_xref="CDD:187593"
     Site            order(57..62,81..83,110..112,138..140,142,161,166,
                     188..190,203,207,234..237,239,241..242)
                     /site_type="other"
                     /note="NADP binding site [chemical binding]"
                     /db_xref="CDD:187593"
     Site            order(115,145..149,152,155..156,159..160,163..164,168,171,
                     194..201,204..205,208..209,211..213,215..217,219..220,
                     248..252,287,296..297,299,301..302,304..306,308)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:187593"
     Site            order(140,143,190..192,197,200,203,234..236,241..242,
                     245..246)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:187593"
     Site            order(162,190,203,207)
                     /site_type="active"
                     /db_xref="CDD:187593"
     CDS             1..339
                     /gene="DHRS7"
                     /coded_by="XM_061156945.1:115..1134"
                     /db_xref="GeneID:133066158"
ORIGIN      
        1 mswglllwll alcallalav qllrfvrada dltllwaewq grrpeweltd mvvwvtgass
       61 gigeelayql sklgvslvls arrvhelerv krkclengnl kekdililpl dltnrsshem
      121 atkavlqefg ridilvnngg vsqralcvdt sldvfkelie lnylgtvslt kcvlphmier
      181 kqgkivtvns ivgiiaapls tgycaskhal rgffntlrte latypgitis nicpgpvqsn
      241 ivknalteev tkttgstade sykmatsrcv rlmlvtmand lkevwiadhp fllmfylwqy
      301 mptlawwltn kaakrrienf ksgvdadssy frsvkkkhd
//
LOCUS       XP_061012929             776 aa            linear   MAM 02-DEC-2023
DEFINITION  reticulon-1 isoform X1 [Dama dama].
ACCESSION   XP_061012929
VERSION     XP_061012929.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156946.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..776
                     /product="reticulon-1 isoform X1"
                     /calculated_mol_wt=83333
     Region          <52..185
                     /region_name="BIM1"
                     /note="Microtubule-binding protein involved in cell cycle
                     control [Cell division and chromosome partitioning /
                     Cytoskeleton]; COG5217"
                     /db_xref="CDD:227542"
     Region          136..>580
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          591..753
                     /region_name="Reticulon"
                     /note="pfam02453"
                     /db_xref="CDD:460562"
     CDS             1..776
                     /gene="RTN1"
                     /coded_by="XM_061156946.1:52..2382"
                     /db_xref="GeneID:133066159"
ORIGIN      
        1 maappdprde llplagpgsq wfgdrgeged eavtpkggkp etlagepgpg sgagvaeaap
       61 relgsgparp ppvametast gasdvsratd htfstvakdg egvcytslis diyyppreda
      121 tyftgilqke nghitasesp eelrspgssl pdvpgteprg lfssdsgiem tpaesaevnk
      181 iladpldqmk aeaykyidit rpeevkykeq chpkleekdl dfknkdteis vrpeetreae
      241 kpvpvegkil kdhlfeestf apyvddisee qrsapliaap vkitlteiep sietatpekt
      301 pekqdiclkp spdtvptvtv sepeddspgs vtppssgtep saaesqgkcg isedelitai
      361 keakglsyet tesprpagqg vdrpeakars glptipspld heassaesgd seielvsedp
      421 laaedtlpsg yvtfghvggp ppspaspsiq ysllreerea eldseliies cdassasees
      481 pkreqdsppm kpgaldaire epgaraeert psqrglaeqe pfrsfpsaap ragpelpsgd
      541 pastregpta prapveaass dqssqatkap glrgpgvmpp llflnkqkai dllywrdikq
      601 tgivfgscll llfsltqfsv vsvvaylala alsatisfri yksvlqavqk tdeghpfkay
      661 leleitlsqe qiqkytdclq fyvnntlkel rrlflvqdlv dslkfavlmw lltyvgalfn
      721 gltlllmavv smftlpvvyv khqaqidqyl glvrthinav vakiqakipg akrhae
//
LOCUS       XP_061012930             208 aa            linear   MAM 02-DEC-2023
DEFINITION  reticulon-1 isoform X2 [Dama dama].
ACCESSION   XP_061012930
VERSION     XP_061012930.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156947.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..208
                     /product="reticulon-1 isoform X2"
                     /calculated_mol_wt=23428
     Region          23..185
                     /region_name="Reticulon"
                     /note="pfam02453"
                     /db_xref="CDD:460562"
     CDS             1..208
                     /gene="RTN1"
                     /coded_by="XM_061156947.1:126..752"
                     /db_xref="GeneID:133066159"
ORIGIN      
        1 mqatadstkm dcvwsnwksq aidllywrdi kqtgivfgsc llllfsltqf svvsvvayla
       61 laalsatisf riyksvlqav qktdeghpfk ayleleitls qeqiqkytdc lqfyvnntlk
      121 elrrlflvqd lvdslkfavl mwlltyvgal fngltlllma vvsmftlpvv yvkhqaqidq
      181 ylglvrthin avvakiqaki pgakrhae
//
LOCUS       XP_061012931             803 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 175 [Dama dama].
ACCESSION   XP_061012931
VERSION     XP_061012931.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156948.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..803
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..803
                     /product="coiled-coil domain-containing protein 175"
                     /calculated_mol_wt=94697
     Region          <262..589
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <477..>779
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..803
                     /gene="CCDC175"
                     /coded_by="XM_061156948.1:1..2412"
                     /db_xref="GeneID:133066161"
ORIGIN      
        1 mrknsklals awspelglgs ekalpvaavs tgpslelctf pstlgssvaa daleqllvve
       61 qslqsdyfkc neeaknflkd vaiavkklee mrkstielle iesmelsrly flletlptsv
      121 sreleecvrd arrgnlveis elhtkitrin demeflkkki lhlqtdntal gerqeelakh
      181 ygkvvlslnh amkekatiti yinetytkin sekkelelqk tyiqeieeqi ereraeylkk
      241 kekltqeiee ykklcelkrk etfakkkeld klrltmtkmk etvttstvvl sdhnlelarl
      301 qesirqweek vedmkkscki ledkmlffkn nkeklddssn sekselllki kqmaeklhkc
      361 hldnkalrek lqtvstqyki vlneedkvfm qkrriysenq kqlafiaqke nflskrkvdi
      421 knmeeglitl gelhratkei yrkqikilne nmeretqrci iaqwkiaclr kkharwikni
      481 kdeikelidk iqeaenrrne lieetnirqh dinefvaqie qltlelkqee defvikeqkl
      541 iqelskfeqr faeeaqiske kevelveclp qlqvaeeeft yknrkfenli etvtaqkneq
      601 nllnnnisql trdfiryinn tkklkqelkq lrehesyktk ahfetvksle neiylhdlkt
      661 dalilenerl keyiaylkdt ieqykrgeed lmrsssdlsc qltdlqtqys dlwaefwttl
      721 kelvesanei lreiknlidk lcerdekieq isillqsdle emrslmeqes etnflkkkkq
      781 rpvkvihvpa vqcsmkktst kks
//
LOCUS       XP_061012932             311 aa            linear   MAM 02-DEC-2023
DEFINITION  JNK1/MAPK8-associated membrane protein isoform X1 [Dama dama].
ACCESSION   XP_061012932
VERSION     XP_061012932.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156949.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..311
                     /product="JNK1/MAPK8-associated membrane protein isoform
                     X1"
                     /calculated_mol_wt=35136
     Region          9..300
                     /region_name="JAMP"
                     /note="JNK1/MAPK8-associated membrane protein; pfam05571"
                     /db_xref="CDD:398936"
     CDS             1..311
                     /gene="JKAMP"
                     /coded_by="XM_061156949.1:88..1023"
                     /db_xref="GeneID:133066162"
ORIGIN      
        1 mavdiqpacl glycgktllf kngsteiyge cgvcprgqrt naqkycqpct espelydwly
       61 lgfmamlplv lhwffiewys gkksssalfq hitalfectm aaiitllvse pvgvlyirsc
      121 rvlmlsdwyt mlynpspdyv ttvhctheav yplytivfiy yafclvlmml lrpllvkkia
      181 cglgksdrfk siyaalyffp iltvlqavgg gllyyafpyi ilvlslvtla vymsaseien
      241 cydllvrkkr livlfshwll haygiisisr vdkleqdlpl lalvptpalf ylftakftep
      301 srilsegang h
//
LOCUS       XP_061012933             305 aa            linear   MAM 02-DEC-2023
DEFINITION  JNK1/MAPK8-associated membrane protein isoform X2 [Dama dama].
ACCESSION   XP_061012933
VERSION     XP_061012933.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156950.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..305
                     /product="JNK1/MAPK8-associated membrane protein isoform
                     X2"
                     /calculated_mol_wt=34512
     Region          3..294
                     /region_name="JAMP"
                     /note="JNK1/MAPK8-associated membrane protein; pfam05571"
                     /db_xref="CDD:398936"
     CDS             1..305
                     /gene="JKAMP"
                     /coded_by="XM_061156950.1:96..1013"
                     /db_xref="GeneID:133066162"
ORIGIN      
        1 maclglycgk tllfkngste iygecgvcpr gqrtnaqkyc qpctespely dwlylgfmam
       61 lplvlhwffi ewysgkksss alfqhitalf ectmaaiitl lvsepvgvly irscrvlmls
      121 dwytmlynps pdyvttvhct heavyplyti vfiyyafclv lmmllrpllv kkiacglgks
      181 drfksiyaal yffpiltvlq avgggllyya fpyiilvlsl vtlavymsas eiencydllv
      241 rkkrlivlfs hwllhaygii sisrvdkleq dlpllalvpt palfylftak ftepsrilse
      301 gangh
//
LOCUS       XP_061012935             354 aa            linear   MAM 02-DEC-2023
DEFINITION  trans-3-hydroxy-L-proline dehydratase [Dama dama].
ACCESSION   XP_061012935
VERSION     XP_061012935.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156952.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..354
                     /product="trans-3-hydroxy-L-proline dehydratase"
                     /calculated_mol_wt=37821
     Region          22..352
                     /region_name="Pro_racemase"
                     /note="Proline racemase; pfam05544"
                     /db_xref="CDD:398923"
     CDS             1..354
                     /gene="L3HYPDH"
                     /coded_by="XM_061156952.1:90..1154"
                     /db_xref="GeneID:133066163"
ORIGIN      
        1 magpltvprl pphdpgtpal svvdmhtgge plrvvlagcp evvgptllak rrymrqhldh
       61 vrrrlmfepr ghrdmygavl vpselpdahl gvlflnnegy ssmcghavla lgrfaldfgl
      121 vpappadare alvnihcpcg lvaafveceg grsrgpvrfh svpafvlatd flvdvpghgk
      181 vvvdvaygga fyafvsaekl gldvcsaktr dlvaaasavt eavkaqfkin hpdsedlafl
      241 ygtiltdgkd tyneepttni cvfadeqvdr sptgsgvtar ialqyhkgll elnqtrafks
      301 satgsvftgk avreakcgdf kavivevsgr ahytgtasfi vedddplrdg fllk
//
LOCUS       XP_061012936            1145 aa            linear   MAM 02-DEC-2023
DEFINITION  disheveled-associated activator of morphogenesis 1 isoform X1 [Dama
            dama].
ACCESSION   XP_061012936
VERSION     XP_061012936.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156953.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1145
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1145
                     /product="disheveled-associated activator of morphogenesis
                     1 isoform X1"
                     /calculated_mol_wt=131564
     Region          122..309
                     /region_name="Drf_GBD"
                     /note="Diaphanous GTPase-binding Domain; pfam06371"
                     /db_xref="CDD:461886"
     Region          312..516
                     /region_name="Drf_FH3"
                     /note="Diaphanous FH3 Domain; pfam06367"
                     /db_xref="CDD:461885"
     Region          521..>590
                     /region_name="PRK12704"
                     /note="phosphodiesterase; Provisional"
                     /db_xref="CDD:237177"
     Region          677..1051
                     /region_name="FH2"
                     /note="Formin Homology 2 Domain; pfam02181"
                     /db_xref="CDD:396655"
     CDS             1..1145
                     /gene="DAAM1"
                     /coded_by="XM_061156953.1:176..3613"
                     /db_xref="GeneID:133066164"
ORIGIN      
        1 mwnflvsffl krlvlwkqpr cpsadewikk lwyiytmeyy saveknsfes vlmrwmklep
       61 iiqseslisq evkqnsamap rkrggrgisf ifccfrnndh peityrlrnd snfalqtmep
      121 alpmppveel dvmfselvde ldltdkhrea mfalpaekkw qiycskkkdq eenkgatswp
      181 efyidqlnsm aarksllale keeeeerskt ieslktalrt kpmrfvtrfi dldglsciln
      241 flktmdyets esrihtslig cikalmnnsq grahvlahse sinviaqsls teniktkvav
      301 leilgavclv pgghkkvlqa mlhyqkyase rtrfqtlind ldkstgryrd evslktaims
      361 finavlsqga gvesldfrlh lryeflmlgi qpvidklreh enstldrhld ffemlrnede
      421 lefakrfelv hidtksatqm feltrkrlth seayphfmsi lhhclqmpyk rsgntvqywl
      481 lldriiqqiv iqndkgqdpd stplenfnik nvvrmlvnen evkqwkeqae kmrkehnelq
      541 qklekkerec daktqekeem mqtlnkmkek lekettehkq vkqqvadlta qlhelsrrav
      601 ctslpavpsp gapggpfpss lpgsllpppp ppplpggmgp ppppplppgg pppppgpppl
      661 ggimpppgap lglalkkkni pqptnalksf nwsklpenkl egtvwaeidd tkvfkvldle
      721 dlertfsayq rqqkeadaid dtlgsklkvr elsvidgrra qncnillsrl klsndeikra
      781 iltmdeqedl pkdmleqllk fvpeksdidl leehkheldr makadrflfe msrinhyqqr
      841 lqslyfkkkf aervaevkpk veairsgsee vfrsgalkql levvlafgny mnkgqrgnay
      901 gfkisslnki adtkssidkn itllhyliti venkypkvln lneelrdipq aakvnmteld
      961 keistlrsgl kavemeleyq ksqpsqpgdk fvsvvsqfit vasfsfsdve dllaeakdlf
     1021 tkavkhfgee agkiqpdeff gifdqflqav seakqenenm rkkkeeeerr armeaqlkeq
     1081 rererkmrka kenseeggef ddlvsalrsg evfdkdlskl krnrkritnq itdssrerpv
     1141 tklnf
//
LOCUS       XP_061012937            1068 aa            linear   MAM 02-DEC-2023
DEFINITION  disheveled-associated activator of morphogenesis 1 isoform X2 [Dama
            dama].
ACCESSION   XP_061012937
VERSION     XP_061012937.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156954.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1068
                     /product="disheveled-associated activator of morphogenesis
                     1 isoform X2"
                     /calculated_mol_wt=122168
     Region          45..232
                     /region_name="Drf_GBD"
                     /note="Diaphanous GTPase-binding Domain; pfam06371"
                     /db_xref="CDD:461886"
     Region          235..439
                     /region_name="Drf_FH3"
                     /note="Diaphanous FH3 Domain; pfam06367"
                     /db_xref="CDD:461885"
     Region          444..>513
                     /region_name="PRK12704"
                     /note="phosphodiesterase; Provisional"
                     /db_xref="CDD:237177"
     Region          600..974
                     /region_name="FH2"
                     /note="Formin Homology 2 Domain; pfam02181"
                     /db_xref="CDD:396655"
     CDS             1..1068
                     /gene="DAAM1"
                     /coded_by="XM_061156954.1:160..3366"
                     /db_xref="GeneID:133066164"
ORIGIN      
        1 maprkrggrg isfifccfrn ndhpeityrl rndsnfalqt mepalpmppv eeldvmfsel
       61 vdeldltdkh reamfalpae kkwqiycskk kdqeenkgat swpefyidql nsmaarksll
      121 alekeeeeer sktieslkta lrtkpmrfvt rfidldglsc ilnflktmdy etsesrihts
      181 ligcikalmn nsqgrahvla hsesinviaq slsteniktk vavleilgav clvpgghkkv
      241 lqamlhyqky asertrfqtl indldkstgr yrdevslkta imsfinavls qgagvesldf
      301 rlhlryeflm lgiqpvidkl rehenstldr hldffemlrn edelefakrf elvhidtksa
      361 tqmfeltrkr lthseayphf msilhhclqm pykrsgntvq ywllldriiq qiviqndkgq
      421 dpdstplenf niknvvrmlv nenevkqwke qaekmrkehn elqqklekke recdaktqek
      481 eemmqtlnkm keklekette hkqvkqqvad ltaqlhelsr ravctslpav pspgapggpf
      541 psslpgsllp pppppplpgg mgpppppplp pggpppppgp pplggimppp gaplglalkk
      601 knipqptnal ksfnwsklpe nklegtvwae iddtkvfkvl dledlertfs ayqrqqkead
      661 aiddtlgskl kvrelsvidg rraqncnill srlklsndei krailtmdeq edlpkdmleq
      721 llkfvpeksd idlleehkhe ldrmakadrf lfemsrinhy qqrlqslyfk kkfaervaev
      781 kpkveairsg seevfrsgal kqllevvlaf gnymnkgqrg naygfkissl nkiadtkssi
      841 dknitllhyl itivenkypk vlnlneelrd ipqaakvnmt eldkeistlr sglkavemel
      901 eyqksqpsqp gdkfvsvvsq fitvasfsfs dvedllaeak dlftkavkhf geeagkiqpd
      961 effgifdqfl qavseakqen enmrkkkeee errarmeaql keqrererkm rkakenseeg
     1021 gefddlvsal rsgevfdkdl sklkrnrkri tnqitdssre rpvtklnf
//
LOCUS       XP_061012938             804 aa            linear   MAM 02-DEC-2023
DEFINITION  dapper homolog 1 isoform X1 [Dama dama].
ACCESSION   XP_061012938
VERSION     XP_061012938.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156955.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..804
                     /product="dapper homolog 1 isoform X1"
                     /calculated_mol_wt=86080
     Region          46..804
                     /region_name="Dapper"
                     /note="pfam15268"
                     /db_xref="CDD:464605"
     CDS             1..804
                     /gene="DACT1"
                     /coded_by="XM_061156955.1:37..2451"
                     /db_xref="GeneID:133066165"
ORIGIN      
        1 mkpsptgtak eqeppaparg eqrtaepegr wrekgeadte rqrtrerqea tlaglaeley
       61 lrqrqellvr galrgtggag aaaaragelp geaaqrnrle ekfleenill lrkqlnclrr
      121 rdagllnqlq eldkqisdlr ldvektseeh letdsrpssg fyelsdgasg slsnssnsvf
      181 seclsschss tcfcspleat ltisdgcpks advnpkyqcd lvskngndvy rypsplhava
      241 vqspmfllcl tgnplreeer lgnhandvca gseqdtvktd tnlpspsslw saphpssskk
      301 mdgyilslvq kkthpvrtnk prtsvnadpt kgllrngsic vrvtggvsqg nsgnlknskq
      361 vplpsggips ldngafsppk qwskeskpep leskrlpape gcspgtatel qgkplpktak
      421 pvsqeharcp pagtgesske sgqipaaspk espgrvlapl qenkvvqplk kvpqknspqa
      481 gtlaprpaas allpptfpae erpaldfrse gsssqsleeg ppgkappvla pppgvrpprg
      541 arpaaaprgs avkhrapavh gpesalpavr ekaraagkkc rfpddtdtnk klrrapakar
      601 rggggqadag lpsrplgtgh ragsrahghg hgreavvakp khkrtdsrrw rsaaevsyee
      661 alrrarrgrr eaaglfaagp yaspyayaas dseysaeces lfhstvldts edersnyttn
      721 cfgdsessvs egdfvgdsts tsdseesggl iwsqfvqtlp lqpvpapdlr hnptktfvki
      781 kashnlkkki lrfrsgslkl mttv
//
LOCUS       XP_061012939             743 aa            linear   MAM 02-DEC-2023
DEFINITION  dapper homolog 1 isoform X2 [Dama dama].
ACCESSION   XP_061012939
VERSION     XP_061012939.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156956.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..743
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..743
                     /product="dapper homolog 1 isoform X2"
                     /calculated_mol_wt=79476
     Region          54..743
                     /region_name="Dapper"
                     /note="pfam15268"
                     /db_xref="CDD:464605"
     CDS             1..743
                     /gene="DACT1"
                     /coded_by="XM_061156956.1:38..2269"
                     /db_xref="GeneID:133066165"
ORIGIN      
        1 mpsmkrlkqq qqnqefdsfr ttlhralecl plqlgvtkan skkkslnpla vpclnclrrr
       61 dagllnqlqe ldkqisdlrl dvektseehl etdsrpssgf yelsdgasgs lsnssnsvfs
      121 eclsschsst cfcspleatl tisdgcpksa dvnpkyqcdl vskngndvyr ypsplhavav
      181 qspmfllclt gnplreeerl gnhandvcag seqdtvktdt nlpspsslws aphpssskkm
      241 dgyilslvqk kthpvrtnkp rtsvnadptk gllrngsicv rvtggvsqgn sgnlknskqv
      301 plpsggipsl dngafsppkq wskeskpepl eskrlpapeg cspgtatelq gkplpktakp
      361 vsqeharcpp agtgesskes gqipaaspke spgrvlaplq enkvvqplkk vpqknspqag
      421 tlaprpaasa llpptfpaee rpaldfrseg sssqsleegp pgkappvlap ppgvrpprga
      481 rpaaaprgsa vkhrapavhg pesalpavre karaagkkcr fpddtdtnkk lrrapakarr
      541 ggggqadagl psrplgtghr agsrahghgh greavvakpk hkrtdsrrwr saaevsyeea
      601 lrrarrgrre aaglfaagpy aspyayaasd seysaecesl fhstvldtse dersnyttnc
      661 fgdsessvse gdfvgdstst sdseesggli wsqfvqtlpl qpvpapdlrh nptktfvkik
      721 ashnlkkkil rfrsgslklm ttv
//
LOCUS       XP_061012940            1555 aa            linear   MAM 02-DEC-2023
DEFINITION  protein TALPID3 isoform X1 [Dama dama].
ACCESSION   XP_061012940
VERSION     XP_061012940.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156957.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1555
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1555
                     /product="protein TALPID3 isoform X1"
                     /calculated_mol_wt=170830
     Region          116..1362
                     /region_name="TALPID3"
                     /note="Hedgehog signalling target; pfam15324"
                     /db_xref="CDD:434634"
     CDS             1..1555
                     /gene="KIAA0586"
                     /coded_by="XM_061156957.1:210..4877"
                     /db_xref="GeneID:133066166"
ORIGIN      
        1 mkgsefclek kkkvkvparr lreivspnqg dnlallkdel srgppalsan krlpvrtgks
       61 lngtlcgssd ltsariyqqp pvenptvses dfskdaavqv lplnkmeenn rqkandifis
      121 qytmgqkdal ravlkqkaqs mpvskevkvq lledagtekd pvtqesrisp sgidsattva
      181 aataaaiata aplikvqsel eakvnsvtel lnklqetdkq lqrvteqqtt mqnkqetlhc
      241 hnhekqmnvf meqhirhlek lqqqqidiqt hfisaalkts sfqpvtvppp iavekysvkp
      301 dhlnfgssnl sshnvftskq apsrevedtt fdkqtsplet ptprrfapvp vsrddkiskr
      361 ekpieekenm elscrtgsvg fleqilnnrd sltrisessd ktslarskmg wnperrnsid
      421 tvatqrfpsy eglgtakvtv qksddilhel dqkrkemnsi lqlkesqmsr laelpqnsvk
      481 lqitntrsvl kdaekilrgv qnnkkvleen leaiirakdg aamysfinal snnreiseki
      541 rirktvddwi ktisaeiqde ltrkdyeqkr fdqknernkr ahyinkyikt dtqdktvnns
      601 viprkhsqkq kedhlrnppi rsmpasslqk erkegflkat tvvqdkdyml qiygkpvyqg
      661 hrstlkkgpy lrfnspspks rpqrpkvier vkgtkvksir tqtdfsatkp tkvdsklqhs
      721 ittlspgdqq ylfspsremp tfsgtleghl ipmavllgqt qsnsdsippa gvivnkphpv
      781 tvttsippss rkieagvkkp niavvemkse krdppqlsvq vlpnvdidsi sngsadvgls
      841 psspkeassp plrtwiqtpe fmkadeeevk fpgtnfdevi divqeeekcd eiseysepil
      901 efnrsvkavs tkyngppfpp vastfqpttd ildkviqrke tlensliqwv eqeimsrmis
      961 gllpiqqqat anasvsvsea sepvtsdive gtsggalqlf vdagvpvnsd mirhfvneal
     1021 aetiavmlgd reakkpgpvv tgvsgdvsts etylparvct platpqptpp hspssppkeh
     1081 llvktpdssp cvsdhdvaip mkeilaeegn dmptitlvnt pavtptttpp paaaltptls
     1141 etsvdklkvs spelpkpwsd gelplaeenp nslqeelhpr aivmsvakde epesedfpaq
     1201 lappkpvalm plsagikaps piqmpssdss tvestlsvta setetldrpi segeilfncg
     1261 hkvapkilgd eglylaslnd slsstlkdal emeddppseg qvirmphrkv hadailslla
     1321 kqnpeslvsq qavyhsedle nsvgelsegq rlpaatadif mglsayvqqp vakaessdek
     1381 cplkpssqqc dtvaadavye dlcashgpms lgelelqpdp hitlpttllt aqesdvklpe
     1441 aaedfpqyqq kqdqdvkqve hkpvqsrlir vrnksdisls qqqaspgdtd qtqiepslyl
     1501 tslftggkav plftsqtspa kmsvtlpsvs pedcsrslsi gtgqgdtess gadtf
//
LOCUS       XP_061012941            1555 aa            linear   MAM 02-DEC-2023
DEFINITION  protein TALPID3 isoform X1 [Dama dama].
ACCESSION   XP_061012941
VERSION     XP_061012941.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156958.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1555
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1555
                     /product="protein TALPID3 isoform X1"
                     /calculated_mol_wt=170830
     Region          116..1362
                     /region_name="TALPID3"
                     /note="Hedgehog signalling target; pfam15324"
                     /db_xref="CDD:434634"
     CDS             1..1555
                     /gene="KIAA0586"
                     /coded_by="XM_061156958.1:500..5167"
                     /db_xref="GeneID:133066166"
ORIGIN      
        1 mkgsefclek kkkvkvparr lreivspnqg dnlallkdel srgppalsan krlpvrtgks
       61 lngtlcgssd ltsariyqqp pvenptvses dfskdaavqv lplnkmeenn rqkandifis
      121 qytmgqkdal ravlkqkaqs mpvskevkvq lledagtekd pvtqesrisp sgidsattva
      181 aataaaiata aplikvqsel eakvnsvtel lnklqetdkq lqrvteqqtt mqnkqetlhc
      241 hnhekqmnvf meqhirhlek lqqqqidiqt hfisaalkts sfqpvtvppp iavekysvkp
      301 dhlnfgssnl sshnvftskq apsrevedtt fdkqtsplet ptprrfapvp vsrddkiskr
      361 ekpieekenm elscrtgsvg fleqilnnrd sltrisessd ktslarskmg wnperrnsid
      421 tvatqrfpsy eglgtakvtv qksddilhel dqkrkemnsi lqlkesqmsr laelpqnsvk
      481 lqitntrsvl kdaekilrgv qnnkkvleen leaiirakdg aamysfinal snnreiseki
      541 rirktvddwi ktisaeiqde ltrkdyeqkr fdqknernkr ahyinkyikt dtqdktvnns
      601 viprkhsqkq kedhlrnppi rsmpasslqk erkegflkat tvvqdkdyml qiygkpvyqg
      661 hrstlkkgpy lrfnspspks rpqrpkvier vkgtkvksir tqtdfsatkp tkvdsklqhs
      721 ittlspgdqq ylfspsremp tfsgtleghl ipmavllgqt qsnsdsippa gvivnkphpv
      781 tvttsippss rkieagvkkp niavvemkse krdppqlsvq vlpnvdidsi sngsadvgls
      841 psspkeassp plrtwiqtpe fmkadeeevk fpgtnfdevi divqeeekcd eiseysepil
      901 efnrsvkavs tkyngppfpp vastfqpttd ildkviqrke tlensliqwv eqeimsrmis
      961 gllpiqqqat anasvsvsea sepvtsdive gtsggalqlf vdagvpvnsd mirhfvneal
     1021 aetiavmlgd reakkpgpvv tgvsgdvsts etylparvct platpqptpp hspssppkeh
     1081 llvktpdssp cvsdhdvaip mkeilaeegn dmptitlvnt pavtptttpp paaaltptls
     1141 etsvdklkvs spelpkpwsd gelplaeenp nslqeelhpr aivmsvakde epesedfpaq
     1201 lappkpvalm plsagikaps piqmpssdss tvestlsvta setetldrpi segeilfncg
     1261 hkvapkilgd eglylaslnd slsstlkdal emeddppseg qvirmphrkv hadailslla
     1321 kqnpeslvsq qavyhsedle nsvgelsegq rlpaatadif mglsayvqqp vakaessdek
     1381 cplkpssqqc dtvaadavye dlcashgpms lgelelqpdp hitlpttllt aqesdvklpe
     1441 aaedfpqyqq kqdqdvkqve hkpvqsrlir vrnksdisls qqqaspgdtd qtqiepslyl
     1501 tslftggkav plftsqtspa kmsvtlpsvs pedcsrslsi gtgqgdtess gadtf
//
LOCUS       XP_061012942            1554 aa            linear   MAM 02-DEC-2023
DEFINITION  protein TALPID3 isoform X2 [Dama dama].
ACCESSION   XP_061012942
VERSION     XP_061012942.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156959.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1554
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1554
                     /product="protein TALPID3 isoform X2"
                     /calculated_mol_wt=170759
     Region          116..1362
                     /region_name="TALPID3"
                     /note="Hedgehog signalling target; pfam15324"
                     /db_xref="CDD:434634"
     CDS             1..1554
                     /gene="KIAA0586"
                     /coded_by="XM_061156959.1:210..4874"
                     /db_xref="GeneID:133066166"
ORIGIN      
        1 mkgsefclek kkkvkvparr lreivspnqg dnlallkdel srgppalsan krlpvrtgks
       61 lngtlcgssd ltsariyqqp pvenptvses dfskdaavqv lplnkmeenn rqkandifis
      121 qytmgqkdal ravlkqkaqs mpvskevkvq lledagtekd pvtqesrisp sgidsattva
      181 aataaaiata aplikvqsel eakvnsvtel lnklqetdkq lqrvteqqtt mqnkqetlhc
      241 hnhekqmnvf meqhirhlek lqqqqidiqt hfisaalkts sfqpvtvppp iavekysvkp
      301 dhlnfgssnl sshnvftskq apsrevedtt fdkqtsplet ptprrfapvp vsrddkiskr
      361 ekpieekenm elscrtgsvg fleqilnnrd sltrisessd ktslarskmg wnperrnsid
      421 tvatqrfpsy eglgtakvtv qksddilhel dqkrkemnsi lqlkesqmsr laelpqnsvk
      481 lqitntrsvl kdaekilrgv qnnkkvleen leaiirakdg aamysfinal snnreiseki
      541 rirktvddwi ktisaeiqde ltrkdyeqkr fdqknernkr ahyinkyikt dtqdktvnns
      601 viprkhsqkq kedhlrnppi rsmpasslqk erkegflkat tvvqdkdyml qiygkpvyqg
      661 hrstlkkgpy lrfnspspks rpqrpkvier vkgtkvksir tqtdfsatkp tkvdsklqhs
      721 ittlspgdqq ylfspsremp tfsgtleghl ipmavllgqt qsnsdsippa gvivnkphpv
      781 tvttsippss rkieagvkkp niavvemkse krdppqlsvq vlpnvdidsi sngsadvgls
      841 psspkeassp plrtwiqtpe fmkadeeevk fpgtnfdevi divqeeekcd eiseysepil
      901 efnrsvkavs tkyngppfpp vastfqpttd ildkviqrke tlensliqwv eqeimsrmis
      961 gllpiqqqat anasvsvsea sepvtsdive gtsggalqlf vdagvpvnsd mirhfvneal
     1021 aetiavmlgd reakkpgpvv tgvsgdvsts etylparvct platpqptpp hspssppkeh
     1081 llvktpdssp cvsdhdvaip mkeilaeegn dmptitlvnt pavtptttpp paaaltptls
     1141 etsvdklkvs spelpkpwsd gelplaeenp nslqeelhpr aivmsvakde epesedfpaq
     1201 lappkpvalm plsagikaps piqmpssdss tvestlsvta setetldrpi segeilfncg
     1261 hkvapkilgd eglylaslnd slsstlkdal emeddppseg qvirmphrkv hadailslla
     1321 kqnpeslvsq qavyhsedle nsvgelsegq rlpaatadif mglsayvqqp vakaessdek
     1381 cplkpssqqc dtvadavyed lcashgpmsl gelelqpdph itlpttllta qesdvklpea
     1441 aedfpqyqqk qdqdvkqveh kpvqsrlirv rnksdislsq qqaspgdtdq tqiepslylt
     1501 slftggkavp lftsqtspak msvtlpsvsp edcsrslsig tgqgdtessg adtf
//
LOCUS       XP_061012943              89 aa            linear   MAM 02-DEC-2023
DEFINITION  mitochondrial import inner membrane translocase subunit Tim9 [Dama
            dama].
ACCESSION   XP_061012943
VERSION     XP_061012943.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156960.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..89
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..89
                     /product="mitochondrial import inner membrane translocase
                     subunit Tim9"
                     /calculated_mol_wt=10247
     Region          10..69
                     /region_name="zf-Tim10_DDP"
                     /note="Tim10/DDP family zinc finger; pfam02953"
                     /db_xref="CDD:460764"
     CDS             1..89
                     /gene="TIMM9"
                     /coded_by="XM_061156960.1:289..558"
                     /db_xref="GeneID:133066168"
ORIGIN      
        1 maaqipesdq ikqfkeflgt ynkltetcfl dcvkdfttre vkpeettcse hclqkylkmt
       61 qrismrfqey hiqqnealaa kagllgqpr
//
LOCUS       XP_061012944             149 aa            linear   MAM 02-DEC-2023
DEFINITION  TOMM20-like protein 1 [Dama dama].
ACCESSION   XP_061012944
VERSION     XP_061012944.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156961.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..149
                     /product="TOMM20-like protein 1"
                     /calculated_mol_wt=17299
     Region          12..124
                     /region_name="MAS20"
                     /note="MAS20 protein import receptor; pfam02064"
                     /db_xref="CDD:460434"
     CDS             1..149
                     /gene="TOMM20L"
                     /coded_by="XM_061156961.1:1..450"
                     /db_xref="GeneID:133066169"
ORIGIN      
        1 mpcvrtvlgl laacgaiafl gyciyfdrsr radpafkrrl rekrraqqrk aegrgaqlwd
       61 pakneklqef flqevrmgel wlsrgehrmg vehlsnallv cgqpqellkv fkhtlppkvf
      121 emllhkipli cqqfeadmne qeyleddrd
//
LOCUS       XP_061012945            1281 aa            linear   MAM 02-DEC-2023
DEFINITION  AT-rich interactive domain-containing protein 4A isoform X1 [Dama
            dama].
ACCESSION   XP_061012945
VERSION     XP_061012945.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156962.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1281
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1281
                     /product="AT-rich interactive domain-containing protein 4A
                     isoform X1"
                     /calculated_mol_wt=144785
     Region          4..61
                     /region_name="Tudor_ARID4A_rpt1"
                     /note="first Tudor domain found in AT-rich interactive
                     domain-containing protein 4A (ARID4A) and similar
                     proteins; cd20459"
                     /db_xref="CDD:410530"
     Site            order(20,23,25,42,45,47)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410530"
     Region          62..118
                     /region_name="Tudor_SF"
                     /note="Tudor domain superfamily; cl02573"
                     /db_xref="CDD:470623"
     Site            order(70,74,76,93,95,97)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410533"
     Region          170..262
                     /region_name="RBB1NT"
                     /note="RBB1NT (NUC162) domain; pfam08169"
                     /db_xref="CDD:462390"
     Region          311..397
                     /region_name="ARID_ARID4A"
                     /note="ARID/BRIGHT DNA binding domain of AT-rich
                     interactive domain-containing protein 4A (ARID4A) and
                     similar proteins; cd16882"
                     /db_xref="CDD:350646"
     Site            order(332..338,363,365..366,369,380,382..384,386)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350646"
     Region          577..635
                     /region_name="CBD_RBP1_like"
                     /note="chromo barrel domain of retinoblastoma binding
                     protein 1, and similar proteins; cd18641"
                     /db_xref="CDD:350843"
     Site            order(592..595,610,612..615,619,621..624,626..628,
                     631..632)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:350843"
     Site            order(592,612,615,619)
                     /site_type="other"
                     /note="putative methylated histone tail binding site
                     [chemical binding]"
                     /db_xref="CDD:350843"
     Site            order(609,611..616,618..622)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350843"
     Site            order(609,612,616,618,622)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:350843"
     CDS             1..1281
                     /gene="ARID4A"
                     /coded_by="XM_061156962.1:209..4054"
                     /db_xref="GeneID:133066170"
ORIGIN      
        1 mkaadepayl tvgtdvsaky rgafceakik tvkrlvkvkv llkqdnttql vqddqvkgpl
       61 rvgaivetrt sdgsfqeavi skltdaswyt vvfddgdert lrrtslclkg erhfaesetl
      121 dqlpltnpeh fgtpviakkm nrgrrsslpv nedekeeess eeededkrrl ndellgkvvs
      181 vvstaeksew ypalvispsc ndditvkkdq clirsfidsk fysiarkdik evdilnlpes
      241 elsakpglqk asiflktrvv pdnwkmdise ilessssdde dgpaeendee kekeakkeee
      301 empeeepdpe erdnflqqly kfmedrgtpi nkppvlgykd lnlfklfrlv yhqggcdnid
      361 sgavwkqiym dlgipilnsa asynvktayr kylygfeeyc rsaniqfrti hhhepkvkee
      421 kkdleesmee apkvdqempl vevksepeen idsnsesere evelksprgr rriardansi
      481 kkeieeekte dklrdndsen kdvdddyeta ekkenelllg rkntpkqkek kirkqedsdk
      541 dseeeeeksq ereeteskcd segeedeedt epcltgtkvk vkygrgktqk iyeasikste
      601 iddgevlylv hyygwnvryd ewvkadriiw pldkggpkkk qkkkaknked sekdekrdee
      661 rqkskrgrpp lkstlssnmp yglsktansd gksgtrsars nmpgssplsn gmedscssds
      721 etedlleknl mneelspdik eeleknenln ddkldeenpk taphilkend rtqmqpletl
      781 klevgeneqi vqilgnkveq eevkkeaeks pkgkgrrskt kdlsleiiki ssfsqdeagt
      841 ephtdaqsle fssldsknfs satedeidqc akekklkrki lgqsspekri riengmemtn
      901 sissntqert sdctasegmk nlnfeqhfei enegmpslia epnqcvqelt nekcdgpaee
      961 tvntplkeee dampligpet lvchevdldd ldekdktsie dmvvessesn slvsippalp
     1021 pvvqhnfsva spltlsqdes rsiksesdit ievdsiaees qeglceresa ngfeasvasg
     1081 tcgiivqere srekgqkrps dgtsgllakk qkrtpkrasa vaknekngag qssdsedlpv
     1141 ldnsskctpv khlsvskpqk larsparisp hikdgekdkq kekhpnsspr tykwsfqlne
     1201 ldnmnsteri sflqeklqei rkyymslkse vatidrrrkr lkkkdrevsh agasmssass
     1261 dtgmspssss ppqnvlavec r
//
LOCUS       XP_061012947            1261 aa            linear   MAM 02-DEC-2023
DEFINITION  AT-rich interactive domain-containing protein 4A isoform X2 [Dama
            dama].
ACCESSION   XP_061012947
VERSION     XP_061012947.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156964.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1261
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1261
                     /product="AT-rich interactive domain-containing protein 4A
                     isoform X2"
                     /calculated_mol_wt=142767
     Region          4..61
                     /region_name="Tudor_ARID4A_rpt1"
                     /note="first Tudor domain found in AT-rich interactive
                     domain-containing protein 4A (ARID4A) and similar
                     proteins; cd20459"
                     /db_xref="CDD:410530"
     Site            order(20,23,25,42,45,47)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410530"
     Region          62..114
                     /region_name="Tudor_ARID4_rpt2"
                     /note="second Tudor domain found in AT-rich interactive
                     domain-containing protein ARID4 family; cd20390"
                     /db_xref="CDD:410461"
     Site            order(70,74,76,93,95,97)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410461"
     Region          170..262
                     /region_name="RBB1NT"
                     /note="RBB1NT (NUC162) domain; pfam08169"
                     /db_xref="CDD:462390"
     Region          311..397
                     /region_name="ARID_ARID4A"
                     /note="ARID/BRIGHT DNA binding domain of AT-rich
                     interactive domain-containing protein 4A (ARID4A) and
                     similar proteins; cd16882"
                     /db_xref="CDD:350646"
     Site            order(332..338,363,365..366,369,380,382..384,386)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350646"
     Region          577..635
                     /region_name="CBD_RBP1_like"
                     /note="chromo barrel domain of retinoblastoma binding
                     protein 1, and similar proteins; cd18641"
                     /db_xref="CDD:350843"
     Site            order(592..595,610,612..615,619,621..624,626..628,
                     631..632)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:350843"
     Site            order(592,612,615,619)
                     /site_type="other"
                     /note="putative methylated histone tail binding site
                     [chemical binding]"
                     /db_xref="CDD:350843"
     Site            order(609,611..616,618..622)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350843"
     Site            order(609,612,616,618,622)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:350843"
     CDS             1..1261
                     /gene="ARID4A"
                     /coded_by="XM_061156964.1:209..3994"
                     /db_xref="GeneID:133066170"
ORIGIN      
        1 mkaadepayl tvgtdvsaky rgafceakik tvkrlvkvkv llkqdnttql vqddqvkgpl
       61 rvgaivetrt sdgsfqeavi skltdaswyt vvfddgdert lrrtslclkg erhfaesetl
      121 dqlpltnpeh fgtpviakkm nrgrrsslpv nedekeeess eeededkrrl ndellgkvvs
      181 vvstaeksew ypalvispsc ndditvkkdq clirsfidsk fysiarkdik evdilnlpes
      241 elsakpglqk asiflktrvv pdnwkmdise ilessssdde dgpaeendee kekeakkeee
      301 empeeepdpe erdnflqqly kfmedrgtpi nkppvlgykd lnlfklfrlv yhqggcdnid
      361 sgavwkqiym dlgipilnsa asynvktayr kylygfeeyc rsaniqfrti hhhepkvkee
      421 kkdleesmee apkvdqempl vevksepeen idsnsesere evelksprgr rriardansi
      481 kkeieeekte dklrdndsen kdvdddyeta ekkenelllg rkntpkqkek kirkqedsdk
      541 dseeeeeksq ereeteskcd segeedeedt epcltgtkvk vkygrgktqk iyeasikste
      601 iddgevlylv hyygwnvryd ewvkadriiw pldkggpkkk qkkkaknked sekdekrdee
      661 rqkskrgrpp lkstlssnmp yglsktansd gksdscssds etedlleknl mneelspdik
      721 eeleknenln ddkldeenpk taphilkend rtqmqpletl klevgeneqi vqilgnkveq
      781 eevkkeaeks pkgkgrrskt kdlsleiiki ssfsqdeagt ephtdaqsle fssldsknfs
      841 satedeidqc akekklkrki lgqsspekri riengmemtn sissntqert sdctasegmk
      901 nlnfeqhfei enegmpslia epnqcvqelt nekcdgpaee tvntplkeee dampligpet
      961 lvchevdldd ldekdktsie dmvvessesn slvsippalp pvvqhnfsva spltlsqdes
     1021 rsiksesdit ievdsiaees qeglceresa ngfeasvasg tcgiivqere srekgqkrps
     1081 dgtsgllakk qkrtpkrasa vaknekngag qssdsedlpv ldnsskctpv khlsvskpqk
     1141 larsparisp hikdgekdkq kekhpnsspr tykwsfqlne ldnmnsteri sflqeklqei
     1201 rkyymslkse vatidrrrkr lkkkdrevsh agasmssass dtgmspssss ppqnvlavec
     1261 r
//
LOCUS       XP_061012948             255 aa            linear   MAM 02-DEC-2023
DEFINITION  proteasome subunit alpha type-3 [Dama dama].
ACCESSION   XP_061012948
VERSION     XP_061012948.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156965.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..255
                     /product="proteasome subunit alpha type-3"
                     /calculated_mol_wt=28288
     Region          5..217
                     /region_name="proteasome_alpha_type_3"
                     /note="The 20S proteasome, multisubunit proteolytic
                     complex, is the central enzyme of nonlysosomal protein
                     degradation in both the cytosol and nucleus. It is
                     composed of 28 subunits arranged as four homoheptameric
                     rings that stack on top of one another forming...;
                     cd03751"
                     /db_xref="CDD:239720"
     Site            order(10..13,15..16,18..19,23,26,29..30,33,41,56,58..59,
                     82..84,86..87,118,121,124..125,128..132,150,155..156,158,
                     160..161,163)
                     /site_type="other"
                     /note="alpha subunit interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239720"
     Site            order(35,51,53,66,168)
                     /site_type="active"
                     /db_xref="CDD:239720"
     CDS             1..255
                     /gene="PSMA3"
                     /coded_by="XM_061156965.1:121..888"
                     /db_xref="GeneID:133066171"
ORIGIN      
        1 mssigtgydl sastfspdgr vfqveyamka vensstaigi rckdgvvfgv eklvlsklye
       61 egsnkrlfnv drhvgmavag lladarslad iareeasnfr snfgyniplk hladrvamyv
      121 haytlysavr pfgcsfmlgs ysvndgaqly midpsgvsyg ywgcaigkar qaakteiekl
      181 qmkemtcrdv vkevakiiyi vhdevkdkaf elelswvgei tngrheivpk direeaekya
      241 keslkeedes dddnm
//
LOCUS       XP_061012949             417 aa            linear   MAM 02-DEC-2023
DEFINITION  actin-related protein 10 [Dama dama].
ACCESSION   XP_061012949
VERSION     XP_061012949.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156966.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..417
                     /product="actin-related protein 10"
                     /calculated_mol_wt=46111
     Region          16..390
                     /region_name="ASKHA_NBD_Arp10"
                     /note="nucleotide-binding domain (NBD) of actin-related
                     protein 10 (Arp10) and similar proteins; cd10207"
                     /db_xref="CDD:466813"
     CDS             1..417
                     /gene="ACTR10"
                     /coded_by="XM_061156966.1:92..1345"
                     /db_xref="GeneID:133066173"
ORIGIN      
        1 mplyeglgsg gektavvidl geaftkcgfa getgprciip svikkagmpk pikvvqynin
       61 teelysylke fihilyfrhl lvnprdrrvv viesvlcpsh fretltrvlf kyfevpsvll
      121 apshlmallt lginsamvld cgyreslvlp iyegipvlnc wgalplggka lhkeletqll
      181 eqctvdtgaa keqslpsvmg sipegiledi kvrtcfvsdl krglniqaak fnidgnterp
      241 spppnvdypl dgekilhvlg sirdsvveil feqdneeksv atlildslmq cpidtrkqla
      301 enlvviggts mlpgflhrll aeirylvekp kykktlatkt frihtppaka ncvawlggai
      361 fgalqdilgs rsvskdyynq tgripdwcsl nnpplemmfd vgksqpplmk rafstek
//
LOCUS       XP_061012950             761 aa            linear   MAM 02-DEC-2023
DEFINITION  armadillo-like helical domain-containing protein 4 [Dama dama].
ACCESSION   XP_061012950
VERSION     XP_061012950.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156967.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..761
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..761
                     /product="armadillo-like helical domain-containing protein
                     4"
                     /calculated_mol_wt=82250
     Region          28..595
                     /region_name="ARMH4"
                     /note="Armadillo-like helical domain-containing protein 4;
                     pfam15767"
                     /db_xref="CDD:464855"
     CDS             1..761
                     /gene="ARMH4"
                     /coded_by="XM_061156967.1:149..2434"
                     /db_xref="GeneID:133066174"
ORIGIN      
        1 msrpivlhic lafcslllln faiqclafpn verreivllh aekgqserln tddlendsvt
       61 skytpvsgdp mivlagsstm slnkvfpsnk etppvgaglm radgsniyta tepevparee
      121 vfgssqperm spqsrpskat ltnpvmptas lnidereess lgtiiqptve gtteatqgfl
      181 syvddqlfat espeglslgh splslvntke ilttsprtek feanpehktt sfpgpkltag
      241 tessqmtadn tqataatkpr lptsesilsv epeadsllga qavtmsvsta vaaapvvsde
      301 wddtkldsvs qiktpelgds tetqvrleis qttqaadvsl egmeggealt eaagvslklp
      361 emethmettl pmarggeras dqssftptsp mgdpkvsvmn lvqdtadfve stkensamfl
      421 ettvstseye seahqplgnr fkdivtqemt tavqaaeaav slvtqeqqis tlevtrgede
      481 teggrelpsa tadaphvtql srrweplatv vsttpipvsf evtpavedlm dtvtgpneel
      541 ftpilgspvt ppgiteeaps tspaladpea sserrtaaps fsyvntatsy gldqleseeg
      601 eddedeedee eedeeeedee edeedkdads ldetlgdtel pgftlpgits qepgleqenv
      661 vslegvtfqv pdaiqweqqn qglvrswmek lkdkagymsg mlvpvgvgia galfilgaly
      721 sikvmnrrrr ngfkrhkrkq refnsmqdrv mlladssede f
//
LOCUS       XP_061012951             361 aa            linear   MAM 02-DEC-2023
DEFINITION  N-alpha-acetyltransferase 30 isoform X1 [Dama dama].
ACCESSION   XP_061012951
VERSION     XP_061012951.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156968.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..361
                     /product="N-alpha-acetyltransferase 30 isoform X1"
                     /calculated_mol_wt=38701
     Region          223..337
                     /region_name="Acetyltransf_1"
                     /note="Acetyltransferase (GNAT) family; pfam00583"
                     /db_xref="CDD:395465"
     Site            order(286..288,298..299)
                     /site_type="other"
                     /note="Coenzyme A binding pocket [chemical binding]"
                     /db_xref="CDD:173926"
     CDS             1..361
                     /gene="NAA30"
                     /coded_by="XM_061156968.1:156..1241"
                     /db_xref="GeneID:133066175"
ORIGIN      
        1 maevppgpss llpppappas aaaephcpfs agaalaccse deeddeeheg ggcggspagg
       61 eaaakghpcl rcppppqeql qlnglinpel rhlraaassl kskvlssaea atiaatpdgg
      121 pratatkgag ihsgespphc lpsnartalp spaeaaaasd paaarnglae gaeqeeeeed
      181 eqvrllassl tagcslrsps grevepgedr tiryvryese lqmpdimrli tkdlsepysi
      241 ytyryfihnw pqlcflamvg eecvgaivck ldmhkkmfrr gyiamlavds kyrrngigtn
      301 lvkkaiyamv egdcdevvle teitnksalk lyenlgfvrd krlfryylng vdalrlklwl
      361 r
//
LOCUS       XP_061012952             328 aa            linear   MAM 02-DEC-2023
DEFINITION  N-alpha-acetyltransferase 30 isoform X2 [Dama dama].
ACCESSION   XP_061012952
VERSION     XP_061012952.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156969.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..328
                     /product="N-alpha-acetyltransferase 30 isoform X2"
                     /calculated_mol_wt=34680
     Region          223..>314
                     /region_name="Acetyltransf_1"
                     /note="Acetyltransferase (GNAT) family; pfam00583"
                     /db_xref="CDD:395465"
     Site            order(286..288,298..299)
                     /site_type="other"
                     /note="Coenzyme A binding pocket [chemical binding]"
                     /db_xref="CDD:173926"
     CDS             1..328
                     /gene="NAA30"
                     /coded_by="XM_061156969.1:156..1142"
                     /db_xref="GeneID:133066175"
ORIGIN      
        1 maevppgpss llpppappas aaaephcpfs agaalaccse deeddeeheg ggcggspagg
       61 eaaakghpcl rcppppqeql qlnglinpel rhlraaassl kskvlssaea atiaatpdgg
      121 pratatkgag ihsgespphc lpsnartalp spaeaaaasd paaarnglae gaeqeeeeed
      181 eqvrllassl tagcslrsps grevepgedr tiryvryese lqmpdimrli tkdlsepysi
      241 ytyryfihnw pqlcflamvg eecvgaivck ldmhkkmfrr gyiamlavds kyrrngigtn
      301 lvkkaiyamv egdcdenlan sviksiyw
//
LOCUS       XP_061012953             708 aa            linear   MAM 02-DEC-2023
DEFINITION  exocyst complex component 5 [Dama dama].
ACCESSION   XP_061012953
VERSION     XP_061012953.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156970.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..708
                     /product="exocyst complex component 5"
                     /calculated_mol_wt=81669
     Region          89..707
                     /region_name="Sec10"
                     /note="Exocyst complex component Sec10; pfam07393"
                     /db_xref="CDD:399988"
     CDS             1..708
                     /gene="EXOC5"
                     /coded_by="XM_061156970.1:113..2239"
                     /db_xref="GeneID:133066177"
ORIGIN      
        1 mattaelfee pfvadeyier lvwrtpgggs rggpeafdpk rlleefvnhi qelqimderi
       61 qrkvekleqq cqkeakefar kvqelqksnq vafqhfqeld ehisyvatkv chlgdqlegv
      121 ntprqravea qklmkyfnef ldgelksdvf tnsekikeaa diiqklhlia qelpfdrfse
      181 vkskiaskyh dlecqliqef tgaqrrgeis rmrevaavll hfkgyshcvd vyikqcqega
      241 ylrndifeda avlcqrvnkq vgdifsnpet vlakliqnvf eiklqsfvkd qlqeywksda
      301 eqylkslydl ytrtaslssk lmefnlgtdk qtflskliks ifisylesyi etetsylksr
      361 sgtilqryyd sknhqkrsig tggiqdlker irqrtnlplg psidthgetf lsqevvvnll
      421 qetkqaferc hrlsdpsdlp rnafriftil veflciehid yaletglagi pssdsknanl
      481 yfldvvhqan tifhlfdkqf ndhlmpliss spklseclqk kkeiieqmem kldtgidrtl
      541 ncmigqmkhi laaeqkktdf kpedennvli qytnacvkvc ayvrkqveki knsmdgknvd
      601 tvlmelgvrf hrliyehlqq ysyscmggml aicdvaeyrk cakdfkiplv lqlfdtlhal
      661 cnllvvnpdn lkqvcsgeql anldknilhs fvqlradyrs arlarhfs
//
LOCUS       XP_061012954             510 aa            linear   MAM 02-DEC-2023
DEFINITION  AP-5 complex subunit mu-1 isoform X1 [Dama dama].
ACCESSION   XP_061012954
VERSION     XP_061012954.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156971.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..510
                     /product="AP-5 complex subunit mu-1 isoform X1"
                     /calculated_mol_wt=56776
     Region          196..497
                     /region_name="AP_MuD_MHD"
                     /note="Mu-homology domain (MHD) of a adaptor protein (AP)
                     encoded by mu-2 related death-inducing gene, MuD (also
                     known as MUDENG); cd09256"
                     /db_xref="CDD:271164"
     CDS             1..510
                     /gene="AP5M1"
                     /coded_by="XM_061156971.1:291..1823"
                     /db_xref="GeneID:133066178"
ORIGIN      
        1 maqravwlis hepgtplcgi vkfsrryptv ekrakvfnga syvpvpedgp flkallfelr
       61 llddekdfle srdscshink tsiyglpvgs eelwpvvafl kngmiyacvp lveqtlsprp
      121 plisisgisq gfellfgvqd flssgqkndt elntklsqls dlllqtcpfg tlldanlqns
      181 ldninfasvt hpqkqpawkt gtykgkpqvs isitekvnsm qydkqeiadt wqvvgvvtck
      241 cdlegsmpnv tislslptng splqdilvhp cvtsldsail tsssidamdd safsgpykfp
      301 ltpplesfnl cyytsqvpvp pilgfyqvke eevqlkiavn lklhesvkns fefceahipf
      361 ynrgpithve ykasfgqlev freksllvwi igqkfpksme islsgtitfg aknhekqpfd
      421 qiciggtayl kkrksgmltm lyvfsklhfr ildytltgcy vdqhsvqvfa sgkpkisthr
      481 klissdyyiw nskapapvty gslllvrchn
//
LOCUS       XP_061012955             495 aa            linear   MAM 02-DEC-2023
DEFINITION  AP-5 complex subunit mu-1 isoform X2 [Dama dama].
ACCESSION   XP_061012955
VERSION     XP_061012955.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156972.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..495
                     /product="AP-5 complex subunit mu-1 isoform X2"
                     /calculated_mol_wt=55004
     Region          196..482
                     /region_name="AP_MuD_MHD"
                     /note="Mu-homology domain (MHD) of a adaptor protein (AP)
                     encoded by mu-2 related death-inducing gene, MuD (also
                     known as MUDENG); cd09256"
                     /db_xref="CDD:271164"
     CDS             1..495
                     /gene="AP5M1"
                     /coded_by="XM_061156972.1:284..1771"
                     /db_xref="GeneID:133066178"
ORIGIN      
        1 maqravwlis hepgtplcgi vkfsrryptv ekrakvfnga syvpvpedgp flkallfelr
       61 llddekdfle srdscshink tsiyglpvgs eelwpvvafl kngmiyacvp lveqtlsprp
      121 plisisgisq gfellfgvqd flssgqkndt elntklsqls dlllqtcpfg tlldanlqns
      181 ldninfasvt hpqkqpawkt gtykgkpqvs isitekvnsm qydkqeiadt wqvvgvvtck
      241 cdlegsmpnv tislslptng splqdilvhp cvtsldsail tsssidamdd safsgpykfp
      301 ltpplesfnl cyytsqvpvp pilgfyqvke eevqlkiavn lklhesvkns fefceahipf
      361 ynrgpithve ykasfgqlev freksllvwi igqkfpksme islsgtitfg aknhekqpfd
      421 qiciggtayl klhfrildyt ltgcyvdqhs vqvfasgkpk isthrkliss dyyiwnskap
      481 apvtygslll vrchn
//
LOCUS       XP_061012956             490 aa            linear   MAM 02-DEC-2023
DEFINITION  AP-5 complex subunit mu-1 isoform X3 [Dama dama].
ACCESSION   XP_061012956
VERSION     XP_061012956.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156973.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..490
                     /product="AP-5 complex subunit mu-1 isoform X3"
                     /calculated_mol_wt=54395
     Region          196..482
                     /region_name="AP_MuD_MHD"
                     /note="Mu-homology domain (MHD) of a adaptor protein (AP)
                     encoded by mu-2 related death-inducing gene, MuD (also
                     known as MUDENG); cd09256"
                     /db_xref="CDD:271164"
     CDS             1..490
                     /gene="AP5M1"
                     /coded_by="XM_061156973.1:282..1754"
                     /db_xref="GeneID:133066178"
ORIGIN      
        1 maqravwlis hepgtplcgi vkfsrryptv ekrakvfnga syvpvpedgp flkallfelr
       61 llddekdfle srdscshink tsiyglpvgs eelwpvvafl kngmiyacvp lveqtlsprp
      121 plisisgisq gfellfgvqd flssgqkndt elntklsqls dlllqtcpfg tlldanlqns
      181 ldninfasvt hpqkqpawkt gtykgkpqvs isitekvnsm qydkqeiadt wqvvgvvtck
      241 cdlegsmpnv tislslptng splqdilvhp cvtsldsail tsssidamdd safsgpykfp
      301 ltpplesfnl cyytsqvpvp pilgfyqvke eevqlkiavn lklhesvkns fefceahipf
      361 ynrgpithve ykasfgqlev freksllvwi igqkfpksme islsgtitfg aknhekqpfd
      421 qiciggtayl klhfrildyt ltgcyvdqhs vqvfasgkpk isthrkliss dyyiwnskap
      481 apvtygslll
//
LOCUS       XP_061012958             440 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: elongation factor 1-gamma-like [Dama dama].
ACCESSION   XP_061012958
VERSION     XP_061012958.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156975.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..440
                     /product="LOW QUALITY PROTEIN: elongation factor
                     1-gamma-like"
                     /calculated_mol_wt=49921
     Region          4..82
                     /region_name="GST_N_EF1Bgamma"
                     /note="GST_N family, Gamma subunit of Elongation Factor 1B
                     (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic
                     translation elongation factor-1 (EF1) complex which plays
                     a central role in the elongation cycle during protein
                     biosynthesis. EF1 consists of...; cd03044"
                     /db_xref="CDD:239342"
     Site            order(13,16,19..20,23,73)
                     /site_type="other"
                     /note="C-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:239342"
     Site            order(14,57..59,71..72)
                     /site_type="other"
                     /note="putative GSH binding site (G-site) [chemical
                     binding]"
                     /db_xref="CDD:239342"
     Site            order(57,70..71,73..74,77)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:239342"
     Region          91..213
                     /region_name="GST_C_EF1Bgamma_like"
                     /note="Glutathione S-transferase C-terminal-like, alpha
                     helical domain of the Gamma subunit of Elongation Factor
                     1B and similar proteins; cd03181"
                     /db_xref="CDD:198290"
     Site            order(96..97,100..101,104,141)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:198290"
     Site            order(103,166,170,199,202..204)
                     /site_type="other"
                     /note="N-terminal domain interface [polypeptide binding]"
                     /db_xref="CDD:198290"
     Region          280..384
                     /region_name="EF1G"
                     /note="Elongation factor 1 gamma, conserved domain;
                     pfam00647"
                     /db_xref="CDD:459888"
     CDS             1..440
                     /gene="LOC133066179"
                     /coded_by="XM_061156975.1:17..1339"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:133066179"
ORIGIN      
        1 maagtlytyp enwrafkali aaqysgaqvc vlstpphfhf gqtnrtpefl rkfpagkvpa
       61 fegddgfcvf esnaiayyvs neelrgstpe aaaqvvqwvs fadsdtvppa stwvfptlgi
      121 mhhkqqaten akdxvrrilg lldahlktrt flvgervtla ditvvctllw lykqvlepsf
      181 gqafpntnrw fltcinqpqf ravlgevklc ekmaqfdakk faesqpkkdt prkekgsree
      241 kpkpqverke gkeekkaaap apeeeldece qalaaepkak dpfahlpksn fvldefkrky
      301 snedtlsval pyfwdhfdkd gwslryseyr fpeeltqtfm scnlitgmfq rldklrknaf
      361 asvilfgtnn sssisgvwvf rgqelafpls pdwqvdygsy twrkldpsse etqtlvreyf
      421 cwegafqhvg kafnqgkifk
//
LOCUS       XP_061012959             704 aa            linear   MAM 02-DEC-2023
DEFINITION  protein O-mannosyl-transferase TMEM260 isoform X1 [Dama dama].
ACCESSION   XP_061012959
VERSION     XP_061012959.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156976.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..704
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..704
                     /product="protein O-mannosyl-transferase TMEM260 isoform
                     X1"
                     /calculated_mol_wt=79034
     Region          49..204
                     /region_name="DUF2723"
                     /note="Protein of unknown function (DUF2723); pfam11028"
                     /db_xref="CDD:463208"
     CDS             1..704
                     /gene="TMEM260"
                     /coded_by="XM_061156976.1:106..2220"
                     /db_xref="GeneID:133066180"
ORIGIN      
        1 mamtgaqlgg raaragarra gglrggvavf aavaavftlt lppsvpggds gelitaahel
       61 gvahppgypl ftlvaklail lfpfgsvayr vnllcglfga vaaallfitv frlsgsyagg
      121 ilaagvfsfs rltwqwsiaa evfslnnlfv gllmaltvhf eeaataqers kiakigafcc
      181 glslcnqhti vlyvlciipw ilfrllkeke lspgsllkls lcfsagllpy iylpvssyln
      241 qarwtwgdqt tllgflthfl reeygtfsla kseigssmse illsqvtnmr tqlsfniqal
      301 avwanicltr kdrqspslvw lftgmfcvys lffawranld iskplfmgvv erfwmqsnav
      361 vavlagigla alvsesnrml ntnglqylew lsaillvtcq iysnysicdq rtnyvidkfa
      421 knllssmprd aiillrgdlp gnslrymhyc eglrpdislv dqemmtyewy lpkmakhlpg
      481 vkfpgnrwnp vegilpsgmv tfnlyhflev nkqketfvci gihegdptwk tnyslwpwgs
      541 cdklvsseiv fnpeewiklt rdiynwtedy grfdpsswes vaneemwqar mktpffifnl
      601 aesaslpsnv kaqlythayn lykeivylqk ehpvnwhkny aiscermlrl qersadpevl
      661 lsetirhfrl ytqkaqndpq ladisvalkh lrkelrslrn mkng
//
LOCUS       XP_061012960             686 aa            linear   MAM 02-DEC-2023
DEFINITION  protein O-mannosyl-transferase TMEM260 isoform X2 [Dama dama].
ACCESSION   XP_061012960
VERSION     XP_061012960.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156977.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..686
                     /product="protein O-mannosyl-transferase TMEM260 isoform
                     X2"
                     /calculated_mol_wt=76883
     Region          49..204
                     /region_name="DUF2723"
                     /note="Protein of unknown function (DUF2723); pfam11028"
                     /db_xref="CDD:463208"
     CDS             1..686
                     /gene="TMEM260"
                     /coded_by="XM_061156977.1:107..2167"
                     /db_xref="GeneID:133066180"
ORIGIN      
        1 mamtgaqlgg raaragarra gglrggvavf aavaavftlt lppsvpggds gelitaahel
       61 gvahppgypl ftlvaklail lfpfgsvayr vnllcglfga vaaallfitv frlsgsyagg
      121 ilaagvfsfs rltwqwsiaa evfslnnlfv gllmaltvhf eeaataqers kiakigafcc
      181 glslcnqhti vlyvlciipw ilfrllkeke lspgsllkls lcfsagllpy iylpvssyln
      241 qarwtwgdqt tllgflthfl reeygtfsla kseigssmse illsqvtnmr tqlsfniqal
      301 avwanicltr kdrqspslvw lftgmfcvys lffawranld iskplfmgvv erfwmqsnav
      361 vavlagigla alvsesnrml ntnglqylew lsaillvtcq iysnysicdq rtnyvidkfa
      421 knllssmprd aiillrgdlp gnslrymhyc eglrpdislv dqemmtyewy lpkmakhlpg
      481 vkfpgnrwnp vegilpsgmv tfnlyhflev nkqketfvci gihegdptwk tnyslwpwgs
      541 cdklvsseiv fnpeewiklt rdiynwtedy grmktpffif nlaesaslps nvkaqlytha
      601 ynlykeivyl qkehpvnwhk nyaiscerml rlqersadpe vllsetirhf rlytqkaqnd
      661 pqladisval khlrkelrsl rnmkng
//
LOCUS       XP_061012961             585 aa            linear   MAM 02-DEC-2023
DEFINITION  protein O-mannosyl-transferase TMEM260 isoform X3 [Dama dama].
ACCESSION   XP_061012961
VERSION     XP_061012961.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156978.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..585
                     /product="protein O-mannosyl-transferase TMEM260 isoform
                     X3"
                     /calculated_mol_wt=65049
     Region          49..204
                     /region_name="DUF2723"
                     /note="Protein of unknown function (DUF2723); pfam11028"
                     /db_xref="CDD:463208"
     CDS             1..585
                     /gene="TMEM260"
                     /coded_by="XM_061156978.1:109..1866"
                     /db_xref="GeneID:133066180"
ORIGIN      
        1 mamtgaqlgg raaragarra gglrggvavf aavaavftlt lppsvpggds gelitaahel
       61 gvahppgypl ftlvaklail lfpfgsvayr vnllcglfga vaaallfitv frlsgsyagg
      121 ilaagvfsfs rltwqwsiaa evfslnnlfv gllmaltvhf eeaataqers kiakigafcc
      181 glslcnqhti vlyvlciipw ilfrllkeke lspgsllkls lcfsagllpy iylpvssyln
      241 qarwtwgdqt tllgflthfl reeygtfsla kseigssmse illsqvtnmr tqlsfniqal
      301 avwanicltr kdrqspslvw lftgmfcvys lffawranld iskplfmgvv erfwmqsnav
      361 vavlagigla alvsesnrml ntnglqylew lsaillvtcq iysnysicdq rtnyvidkfa
      421 knllssmprd aiillrgdlp gnslrymhyc eglrpdislv dqemmtyewy lpkmakhlpg
      481 vkfpgnrwnp vegilpsgmv tfnlyhflev nkqketfvci gihegdptwk tnyslwpwgs
      541 cdklvsseiv fnpeewiklt rdiynwtedy gsfirrlsiy krntq
//
LOCUS       XP_061012962             427 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase pellino homolog 2 isoform X1 [Dama
            dama].
ACCESSION   XP_061012962
VERSION     XP_061012962.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156979.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..427
                     /product="E3 ubiquitin-protein ligase pellino homolog 2
                     isoform X1"
                     /calculated_mol_wt=47076
     Region          34..427
                     /region_name="Pellino"
                     /note="pfam04710"
                     /db_xref="CDD:461403"
     CDS             1..427
                     /gene="PELI2"
                     /coded_by="XM_061156979.1:55..1338"
                     /db_xref="GeneID:133066181"
ORIGIN      
        1 mdpgqgragv slfcalsprs atawhwtvkn mdeyngalpn gdrgrrksrf alykrpkang
       61 vkpstvhvis tpqaskaisc kgqhsisytl srnqtvvvey thdkdtdmfq vgrstespid
      121 fvvtdtisgs qnndeaqitq stisrfacri vcdrnepyta rifaagfdss kniflgekaa
      181 kwknpdghmd glttngvlvm hprggftees qpgvwreisv cgdvytlret rsaqqrgklv
      241 etetnvlqdg slidlcgatl lwrtadglfh tptqkhieal rqeinaarpq cpvglntlaf
      301 psinrkevve ekqpwaylsc ghvhgyhnwg hrsdteaner ecpmcrtvgp yvplwlgcea
      361 gfyvdagppt haftpcghvc seksakywaq iplphgthaf haacpfcatq llgeqncikl
      421 ifqgpvd
//
LOCUS       XP_061012963             420 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase pellino homolog 2 isoform X2 [Dama
            dama].
ACCESSION   XP_061012963
VERSION     XP_061012963.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156980.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..420
                     /product="E3 ubiquitin-protein ligase pellino homolog 2
                     isoform X2"
                     /calculated_mol_wt=46315
     Region          12..420
                     /region_name="Pellino"
                     /note="pfam04710"
                     /db_xref="CDD:461403"
     CDS             1..420
                     /gene="PELI2"
                     /coded_by="XM_061156980.1:202..1464"
                     /db_xref="GeneID:133066181"
ORIGIN      
        1 mfspgqeehc apnkepvkyg elvvlgynga lpngdrgrrk srfalykrpk angvkpstvh
       61 vistpqaska isckgqhsis ytlsrnqtvv veythdkdtd mfqvgrstes pidfvvtdti
      121 sgsqnndeaq itqstisrfa crivcdrnep ytarifaagf dsskniflge kaakwknpdg
      181 hmdglttngv lvmhprggft eesqpgvwre isvcgdvytl retrsaqqrg klvetetnvl
      241 qdgslidlcg atllwrtadg lfhtptqkhi ealrqeinaa rpqcpvglnt lafpsinrke
      301 vveekqpway lscghvhgyh nwghrsdtea nerecpmcrt vgpyvplwlg ceagfyvdag
      361 ppthaftpcg hvcseksaky waqiplphgt hafhaacpfc atqllgeqnc iklifqgpvd
//
LOCUS       XP_061012964             402 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase pellino homolog 2 isoform X3 [Dama
            dama].
ACCESSION   XP_061012964
VERSION     XP_061012964.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156981.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..402
                     /product="E3 ubiquitin-protein ligase pellino homolog 2
                     isoform X3"
                     /calculated_mol_wt=44448
     Region          9..402
                     /region_name="Pellino"
                     /note="pfam04710"
                     /db_xref="CDD:461403"
     CDS             1..402
                     /gene="PELI2"
                     /coded_by="XM_061156981.1:189..1397"
                     /db_xref="GeneID:133066181"
ORIGIN      
        1 mlpypesryn galpngdrgr rksrfalykr pkangvkpst vhvistpqas kaisckgqhs
       61 isytlsrnqt vvveythdkd tdmfqvgrst espidfvvtd tisgsqnnde aqitqstisr
      121 facrivcdrn epytarifaa gfdssknifl gekaakwknp dghmdglttn gvlvmhprgg
      181 fteesqpgvw reisvcgdvy tlretrsaqq rgklvetetn vlqdgslidl cgatllwrta
      241 dglfhtptqk hiealrqein aarpqcpvgl ntlafpsinr kevveekqpw aylscghvhg
      301 yhnwghrsdt eanerecpmc rtvgpyvplw lgceagfyvd agppthaftp cghvcseksa
      361 kywaqiplph gthafhaacp fcatqllgeq nciklifqgp vd
//
LOCUS       XP_061012965             361 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase pellino homolog 2 isoform X4 [Dama
            dama].
ACCESSION   XP_061012965
VERSION     XP_061012965.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156982.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..361
                     /product="E3 ubiquitin-protein ligase pellino homolog 2
                     isoform X4"
                     /calculated_mol_wt=39875
     Region          34..361
                     /region_name="Pellino"
                     /note="pfam04710"
                     /db_xref="CDD:461403"
     CDS             1..361
                     /gene="PELI2"
                     /coded_by="XM_061156982.1:60..1145"
                     /db_xref="GeneID:133066181"
ORIGIN      
        1 mdpgqgragv slfcalsprs atawhwtvkn mdeyngalpn gdrgrrksrf alykrpkang
       61 vkpstvhvis tpqaskaisc kgqhsisytl srnqtvvvey thdkdtdmfq ekaakwknpd
      121 ghmdglttng vlvmhprggf teesqpgvwr eisvcgdvyt lretrsaqqr gklvetetnv
      181 lqdgslidlc gatllwrtad glfhtptqkh iealrqeina arpqcpvgln tlafpsinrk
      241 evveekqpwa ylscghvhgy hnwghrsdte anerecpmcr tvgpyvplwl gceagfyvda
      301 gppthaftpc ghvcseksak ywaqiplphg thafhaacpf catqllgeqn ciklifqgpv
      361 d
//
LOCUS       XP_061012966            1360 aa            linear   MAM 02-DEC-2023
DEFINITION  kinectin isoform X1 [Dama dama].
ACCESSION   XP_061012966
VERSION     XP_061012966.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156983.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1360
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1360
                     /product="kinectin isoform X1"
                     /calculated_mol_wt=157155
     Region          29..160
                     /region_name="Rib_recp_KP_reg"
                     /note="Ribosome receptor lysine/proline rich region;
                     pfam05104"
                     /db_xref="CDD:461548"
     Region          <272..>529
                     /region_name="CCDC158"
                     /note="Coiled-coil domain-containing protein 158;
                     pfam15921"
                     /db_xref="CDD:464943"
     Region          461..1202
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <1116..>1360
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..1360
                     /gene="KTN1"
                     /coded_by="XM_061156983.1:160..4242"
                     /db_xref="GeneID:133066184"
ORIGIN      
        1 mefyestyfi vlipsvvitv iflffwlfmk etlydevlak qkreqklipt ktdkkkaekk
       61 knkkkeiqng nlhesdsesv prdfklsdal avedeqvvpv plnvvespss vrerkkkekk
      121 hkpvleeqvt kesdvskipc kkvepvpvtk qptppseaaa skkkpgqkks knesddqdkk
      181 vesltapskk qeslplhqet kqesglgkkk vsskkqkten getflvdepl ihattyiplm
      241 dnadsnpvvd krevidlikp dqveviqktg akklkietdk enaevkfkdf llslktmmfs
      301 eeealcvvdl lkeksgviqd alkkynkgel talvhqlqek dklvtalked aaamkdrckq
      361 ltqemmaeke rssvvisrmk drigtlekeh nvfqnkmhvs yqetqqmqmk fqqvreqmea
      421 eiahlkqeng ilrdavsnta nqleskqsae lnklrqdyar lvneltektg klqqeevqkk
      481 naeqavtqlk vqlqeaerrw eevqsyirkr taeheaaqqd lqskfvaken evqslhsklt
      541 dtlvskqqle qrlmqlmese qkrvnkeesl qmqvqdileq nealkaqiqq fhsqiaaqts
      601 asalaeelhk viaekdkqik qtedslaneh dhlaskeeel kdiqnmnfll kaevqklqal
      661 aneqaaaahe lekmqksihv kddkirllee qlqceisnkm eefkilsdqn kalqlevqkl
      721 qtlvseqpnk dvleqmerci qekdeklktv eelletgliq vatkeeelna irtenssltk
      781 evqdlkakqn dqvsfaslve elkkvihekd gkiksveell eaellkvank ektiqdlkqe
      841 iealkeeign iqlekaqqls itsqvqelqn llrgkeeqmn smktaleeke kdlddrgrrl
      901 qdlqeenesl kthvqefaqh kfqeacsasq feelqivlke kenemkrlet mlkeresdls
      961 nktkllqevq denklfksqi eelkqqnyqq assfppheel lkgiserdke itdlqnelhs
     1021 lkdavehqrk knndlreknw eamealaste kllqdkvnkt skerqqhvea veleakevlk
     1081 klfpkvsvps nlsysewlhg fekkakecva gasgseevkd lehklkeade mhtllqlece
     1141 kyksvlaete gilqklqrsv eqeenkwkvk vdesqktikq mqlsftsseq eldrlrrenk
     1201 dienlrrere hlemelekae merstyvtev relkdlltel qkklddsyse avrqneelnl
     1261 lkkqlnetha klrteqserq kvagdlhkaq qsldliqski vkaagdttvi ensdvsqeme
     1321 sseketmsvs lnqtvtqlqq llqavnqqlt kekehyqvle
//
LOCUS       XP_061012967            1357 aa            linear   MAM 02-DEC-2023
DEFINITION  kinectin isoform X2 [Dama dama].
ACCESSION   XP_061012967
VERSION     XP_061012967.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156984.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1357
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1357
                     /product="kinectin isoform X2"
                     /calculated_mol_wt=156820
     Region          29..160
                     /region_name="Rib_recp_KP_reg"
                     /note="Ribosome receptor lysine/proline rich region;
                     pfam05104"
                     /db_xref="CDD:461548"
     Region          <269..>526
                     /region_name="CCDC158"
                     /note="Coiled-coil domain-containing protein 158;
                     pfam15921"
                     /db_xref="CDD:464943"
     Region          458..1269
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1357
                     /gene="KTN1"
                     /coded_by="XM_061156984.1:31..4104"
                     /db_xref="GeneID:133066184"
ORIGIN      
        1 mefyestyfi vlipsvvitv iflffwlfmk etlydevlak qkreqklipt ktdkkkaekk
       61 knkkkeiqng nlhesdsesv prdfklsdal avedeqvvpv plnvvespss vrerkkkekk
      121 hkpvleeqvt kesdvskipc kkvepvpvtk qptppseaaa skkkpgqkks knesddqdkk
      181 vesltapskk qeslplhqet kqesglgkkk vsskkqkten vlvdepliha ttyiplmdna
      241 dsnpvvdkre vidlikpdqv eviqktgakk lkietdkena evkfkdflls lktmmfseee
      301 alcvvdllke ksgviqdalk kynkgeltal vhqlqekdkl vtalkedaaa mkdrckqltq
      361 emmaekerss vvisrmkdri gtlekehnvf qnkmhvsyqe tqqmqmkfqq vreqmeaeia
      421 hlkqengilr davsntanql eskqsaelnk lrqdyarlvn eltektgklq qeevqkknae
      481 qavtqlkvql qeaerrweev qsyirkrtae heaaqqdlqs kfvakenevq slhskltdtl
      541 vskqqleqrl mqlmeseqkr vnkeeslqmq vqdileqnea lkaqiqqfhs qiaaqtsasa
      601 laeelhkvia ekdkqikqte dslanehdhl askeeelkdi qnmnfllkae vqklqalane
      661 qaaaahelek mqksihvkdd kirlleeqlq ceisnkmeef kilsdqnkal qlevqklqtl
      721 vseqpnkdvl eqmerciqek deklktveel letgliqvat keeelnairt enssltkevq
      781 dlkakqndqv sfaslveelk kvihekdgki ksveelleae llkvankekt iqdlkqeiea
      841 lkeeigniql ekaqqlsits qvqelqnllr gkeeqmnsmk taleekekdl ddrgrrlqdl
      901 qeeneslkth vqefaqhkfq eacsasqfee lqivlkeken emkrletmlk eresdlsnkt
      961 kllqevqden klfksqieel kqqnyqqass fppheellkg iserdkeitd lqnelhslkd
     1021 avehqrkknn dlreknweam ealastekll qdkvnktske rqqhveavel eakevlkklf
     1081 pkvsvpsnls ysewlhgfek kakecvagas gseevkdleh klkeademht llqlecekyk
     1141 svlaetegil qklqrsveqe enkwkvkvde sqktikqmql sftsseqeld rlrrenkdie
     1201 nlrrerehle melekaemer styvtevrel kdlltelqkk lddsyseavr qneelnllkk
     1261 qlnethaklr teqserqkva gdlhkaqqsl dliqskivka agdttviens dvsqemesse
     1321 ketmsvslnq tvtqlqqllq avnqqltkek ehyqvle
//
LOCUS       XP_061012968            1336 aa            linear   MAM 02-DEC-2023
DEFINITION  kinectin isoform X3 [Dama dama].
ACCESSION   XP_061012968
VERSION     XP_061012968.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156985.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1336
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1336
                     /product="kinectin isoform X3"
                     /calculated_mol_wt=154234
     Region          29..160
                     /region_name="Rib_recp_KP_reg"
                     /note="Ribosome receptor lysine/proline rich region;
                     pfam05104"
                     /db_xref="CDD:461548"
     Region          <272..>529
                     /region_name="CCDC158"
                     /note="Coiled-coil domain-containing protein 158;
                     pfam15921"
                     /db_xref="CDD:464943"
     Region          461..1248
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1336
                     /gene="KTN1"
                     /coded_by="XM_061156985.1:31..4041"
                     /db_xref="GeneID:133066184"
ORIGIN      
        1 mefyestyfi vlipsvvitv iflffwlfmk etlydevlak qkreqklipt ktdkkkaekk
       61 knkkkeiqng nlhesdsesv prdfklsdal avedeqvvpv plnvvespss vrerkkkekk
      121 hkpvleeqvt kesdvskipc kkvepvpvtk qptppseaaa skkkpgqkks knesddqdkk
      181 vesltapskk qeslplhqet kqesglgkkk vsskkqkten getflvdepl ihattyiplm
      241 dnadsnpvvd krevidlikp dqveviqktg akklkietdk enaevkfkdf llslktmmfs
      301 eeealcvvdl lkeksgviqd alkkynkgel talvhqlqek dklvtalked aaamkdrckq
      361 ltqemmaeke rssvvisrmk drigtlekeh nvfqnkmhvs yqetqqmqmk fqqvreqmea
      421 eiahlkqeng ilrdavsnta nqleskqsae lnklrqdyar lvneltektg klqqeevqkk
      481 naeqavtqlk vqlqeaerrw eevqsyirkr taeheaaqqd lqskfvaken evqslhsklt
      541 dtlvskqqle qrlmqlmese qkrvnkeesl qmqvqdileq nealkaqiqq fhsqiaaqts
      601 asalaeelhk viaekdkqik qtedslaneh dhlaskeeel kdiqnmnfll kaevqklqal
      661 aneqaaaahe lekmqksihv kddkirllee qlqceisnkm eefkilsdqn kalqlevqkl
      721 qtlvseqpnk dvleqmerci qekdeklktv eelletgliq vatkeeelna irtenssltk
      781 evqdlkakqn dqvsfaslve elkkvihekd gkiksveell eaellkvank ektiqdlkqe
      841 iealkeeign iqlekaqqls itsqvqelqn llrgkeeqmn smktaleeke kdlddrgrrl
      901 qdlqeenesl kthvqefaqh kfqeacsasq feelqivlke kenemkrlet mlkeresdls
      961 nktkllqevq denklfksqi eelkqqnyqq assfppheel lkgiserdke itdlqnelhs
     1021 lkdavehqrk knndlreknw eamealaste kllqdkvnkt skerqqhvea veleakevlk
     1081 klfpkvsvps nlsysewlhg fekkakecva gasgseevkd lehklkeade mhtllqlece
     1141 kyksvlaete gilqklqrsv eqeenkwkvk vdesqktikq lrrerehlem elekaemers
     1201 tyvtevrelk dlltelqkkl ddsyseavrq neelnllkkq lnethaklrt eqserqkvag
     1261 dlhkaqqsld liqskivkaa gdttviensd vsqemessek etmsvslnqt vtqlqqllqa
     1321 vnqqltkeke hyqvle
//
LOCUS       XP_061012969            1332 aa            linear   MAM 02-DEC-2023
DEFINITION  kinectin isoform X4 [Dama dama].
ACCESSION   XP_061012969
VERSION     XP_061012969.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156986.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1332
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1332
                     /product="kinectin isoform X4"
                     /calculated_mol_wt=153867
     Region          29..160
                     /region_name="Rib_recp_KP_reg"
                     /note="Ribosome receptor lysine/proline rich region;
                     pfam05104"
                     /db_xref="CDD:461548"
     Region          <272..>529
                     /region_name="CCDC158"
                     /note="Coiled-coil domain-containing protein 158;
                     pfam15921"
                     /db_xref="CDD:464943"
     Region          461..1251
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1332
                     /gene="KTN1"
                     /coded_by="XM_061156986.1:31..4029"
                     /db_xref="GeneID:133066184"
ORIGIN      
        1 mefyestyfi vlipsvvitv iflffwlfmk etlydevlak qkreqklipt ktdkkkaekk
       61 knkkkeiqng nlhesdsesv prdfklsdal avedeqvvpv plnvvespss vrerkkkekk
      121 hkpvleeqvt kesdvskipc kkvepvpvtk qptppseaaa skkkpgqkks knesddqdkk
      181 vesltapskk qeslplhqet kqesglgkkk vsskkqkten getflvdepl ihattyiplm
      241 dnadsnpvvd krevidlikp dqveviqktg akklkietdk enaevkfkdf llslktmmfs
      301 eeealcvvdl lkeksgviqd alkkynkgel talvhqlqek dklvtalked aaamkdrckq
      361 ltqemmaeke rssvvisrmk drigtlekeh nvfqnkmhvs yqetqqmqmk fqqvreqmea
      421 eiahlkqeng ilrdavsnta nqleskqsae lnklrqdyar lvneltektg klqqeevqkk
      481 naeqavtqlk vqlqeaerrw eevqsyirkr taeheaaqqd lqskfvaken evqslhsklt
      541 dtlvskqqle qrlmqlmese qkrvnkeesl qmqvqdileq nealkaqiqq fhsqiaaqts
      601 asalaeelhk viaekdkqik qtedslaneh dhlaskeeel kdiqnmnfll kaevqklqal
      661 aneqaaaahe lekmqksihv kddkirllee qlqceisnkm eefkilsdqn kalqlevqkl
      721 qtlvseqpnk dvleqmerci qekdeklktv eelletgliq vatkeeelna irtenssltk
      781 evqdlkakqn dqvsfaslve elkkvihekd gkiksveell eaellkvank ektiqdlkqe
      841 iealkeeign iqlekaqqls itsqvqelqn llrgkeeqmn smktaleeke kdlddrgrrl
      901 qdlqeenesl kthvqefaqh kfqeacsasq feelqivlke kenemkrlet mlkeresdls
      961 nktkllqevq denklfksqi eelkqqnyqq assfppheel lkgiserdke itdlqnelhs
     1021 lkdavehqrk knndlreknw eamealaste kllqdkvnkt skerqqhvea veleakevlk
     1081 klfpkvsvps nlsysewlhg fekkakecva gasgseevkd lehklkeade mhtllqlece
     1141 kyksvlaete gilqklqrsv eqeenkwkvk vdesqktikq mqlsftsseq eldrlrrenk
     1201 dienlrrere hlemelekae merstyvtev relkkqlnet haklrteqse rqkvagdlhk
     1261 aqqsldliqs kivkaagdtt viensdvsqe messeketms vslnqtvtql qqllqavnqq
     1321 ltkekehyqv le
//
LOCUS       XP_061012970            1331 aa            linear   MAM 02-DEC-2023
DEFINITION  kinectin isoform X5 [Dama dama].
ACCESSION   XP_061012970
VERSION     XP_061012970.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156987.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1331
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1331
                     /product="kinectin isoform X5"
                     /calculated_mol_wt=153796
     Region          29..160
                     /region_name="Rib_recp_KP_reg"
                     /note="Ribosome receptor lysine/proline rich region;
                     pfam05104"
                     /db_xref="CDD:461548"
     Region          <272..>529
                     /region_name="CCDC158"
                     /note="Coiled-coil domain-containing protein 158;
                     pfam15921"
                     /db_xref="CDD:464943"
     Region          461..1244
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1331
                     /gene="KTN1"
                     /coded_by="XM_061156987.1:31..4026"
                     /db_xref="GeneID:133066184"
ORIGIN      
        1 mefyestyfi vlipsvvitv iflffwlfmk etlydevlak qkreqklipt ktdkkkaekk
       61 knkkkeiqng nlhesdsesv prdfklsdal avedeqvvpv plnvvespss vrerkkkekk
      121 hkpvleeqvt kesdvskipc kkvepvpvtk qptppseaaa skkkpgqkks knesddqdkk
      181 vesltapskk qeslplhqet kqesglgkkk vsskkqkten getflvdepl ihattyiplm
      241 dnadsnpvvd krevidlikp dqveviqktg akklkietdk enaevkfkdf llslktmmfs
      301 eeealcvvdl lkeksgviqd alkkynkgel talvhqlqek dklvtalked aaamkdrckq
      361 ltqemmaeke rssvvisrmk drigtlekeh nvfqnkmhvs yqetqqmqmk fqqvreqmea
      421 eiahlkqeng ilrdavsnta nqleskqsae lnklrqdyar lvneltektg klqqeevqkk
      481 naeqavtqlk vqlqeaerrw eevqsyirkr taeheaaqqd lqskfvaken evqslhsklt
      541 dtlvskqqle qrlmqlmese qkrvnkeesl qmqvqdileq nealkaqiqq fhsqiaaqts
      601 asalaeelhk viaekdkqik qtedslaneh dhlaskeeel kdiqnmnfll kaevqklqal
      661 aneqaaaahe lekmqksihv kddkirllee qlqceisnkm eefkilsdqn kalqlevqkl
      721 qtlvseqpnk dvleqmerci qekdeklktv eelletgliq vatkeeelna irtenssltk
      781 evqdlkakqn dqvsfaslve elkkvihekd gkiksveell eaellkvank ektiqdlkqe
      841 iealkeeign iqlekaqqls itsqvqelqn llrgkeeqmn smktaleeke kdlddrgrrl
      901 qdlqeenesl kthvqefaqh kfqeacsasq feelqivlke kenemkrlet mlkeresdls
      961 nktkllqevq denklfksqi eelkqqnyqq assfppheel lkgiserdke itdlqnelhs
     1021 lkdavehqrk knnerqqhve aveleakevl kklfpkvsvp snlsysewlh gfekkakecv
     1081 agasgseevk dlehklkead emhtllqlec ekyksvlaet egilqklqrs veqeenkwkv
     1141 kvdesqktik qmqlsftsse qeldrlrren kdienlrrer ehlemeleka emerstyvte
     1201 vrelkdllte lqkklddsys eavrqneeln llkkqlneth aklrteqser qkvagdlhka
     1261 qqsldliqsk ivkaagdttv iensdvsqem esseketmsv slnqtvtqlq qllqavnqql
     1321 tkekehyqvl e
//
LOCUS       XP_061012971            1329 aa            linear   MAM 02-DEC-2023
DEFINITION  kinectin isoform X6 [Dama dama].
ACCESSION   XP_061012971
VERSION     XP_061012971.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156988.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1329
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1329
                     /product="kinectin isoform X6"
                     /calculated_mol_wt=153532
     Region          29..160
                     /region_name="Rib_recp_KP_reg"
                     /note="Ribosome receptor lysine/proline rich region;
                     pfam05104"
                     /db_xref="CDD:461548"
     Region          <269..>526
                     /region_name="CCDC158"
                     /note="Coiled-coil domain-containing protein 158;
                     pfam15921"
                     /db_xref="CDD:464943"
     Region          458..1248
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1329
                     /gene="KTN1"
                     /coded_by="XM_061156988.1:31..4020"
                     /db_xref="GeneID:133066184"
ORIGIN      
        1 mefyestyfi vlipsvvitv iflffwlfmk etlydevlak qkreqklipt ktdkkkaekk
       61 knkkkeiqng nlhesdsesv prdfklsdal avedeqvvpv plnvvespss vrerkkkekk
      121 hkpvleeqvt kesdvskipc kkvepvpvtk qptppseaaa skkkpgqkks knesddqdkk
      181 vesltapskk qeslplhqet kqesglgkkk vsskkqkten vlvdepliha ttyiplmdna
      241 dsnpvvdkre vidlikpdqv eviqktgakk lkietdkena evkfkdflls lktmmfseee
      301 alcvvdllke ksgviqdalk kynkgeltal vhqlqekdkl vtalkedaaa mkdrckqltq
      361 emmaekerss vvisrmkdri gtlekehnvf qnkmhvsyqe tqqmqmkfqq vreqmeaeia
      421 hlkqengilr davsntanql eskqsaelnk lrqdyarlvn eltektgklq qeevqkknae
      481 qavtqlkvql qeaerrweev qsyirkrtae heaaqqdlqs kfvakenevq slhskltdtl
      541 vskqqleqrl mqlmeseqkr vnkeeslqmq vqdileqnea lkaqiqqfhs qiaaqtsasa
      601 laeelhkvia ekdkqikqte dslanehdhl askeeelkdi qnmnfllkae vqklqalane
      661 qaaaahelek mqksihvkdd kirlleeqlq ceisnkmeef kilsdqnkal qlevqklqtl
      721 vseqpnkdvl eqmerciqek deklktveel letgliqvat keeelnairt enssltkevq
      781 dlkakqndqv sfaslveelk kvihekdgki ksveelleae llkvankekt iqdlkqeiea
      841 lkeeigniql ekaqqlsits qvqelqnllr gkeeqmnsmk taleekekdl ddrgrrlqdl
      901 qeeneslkth vqefaqhkfq eacsasqfee lqivlkeken emkrletmlk eresdlsnkt
      961 kllqevqden klfksqieel kqqnyqqass fppheellkg iserdkeitd lqnelhslkd
     1021 avehqrkknn dlreknweam ealastekll qdkvnktske rqqhveavel eakevlkklf
     1081 pkvsvpsnls ysewlhgfek kakecvagas gseevkdleh klkeademht llqlecekyk
     1141 svlaetegil qklqrsveqe enkwkvkvde sqktikqmql sftsseqeld rlrrenkdie
     1201 nlrrerehle melekaemer styvtevrel kkqlnethak lrteqserqk vagdlhkaqq
     1261 sldliqskiv kaagdttvie nsdvsqemes seketmsvsl nqtvtqlqql lqavnqqltk
     1321 ekehyqvle
//
LOCUS       XP_061012972            1328 aa            linear   MAM 02-DEC-2023
DEFINITION  kinectin isoform X7 [Dama dama].
ACCESSION   XP_061012972
VERSION     XP_061012972.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156989.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1328
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1328
                     /product="kinectin isoform X7"
                     /calculated_mol_wt=153461
     Region          29..160
                     /region_name="Rib_recp_KP_reg"
                     /note="Ribosome receptor lysine/proline rich region;
                     pfam05104"
                     /db_xref="CDD:461548"
     Region          <269..>526
                     /region_name="CCDC158"
                     /note="Coiled-coil domain-containing protein 158;
                     pfam15921"
                     /db_xref="CDD:464943"
     Region          458..1241
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1328
                     /gene="KTN1"
                     /coded_by="XM_061156989.1:31..4017"
                     /db_xref="GeneID:133066184"
ORIGIN      
        1 mefyestyfi vlipsvvitv iflffwlfmk etlydevlak qkreqklipt ktdkkkaekk
       61 knkkkeiqng nlhesdsesv prdfklsdal avedeqvvpv plnvvespss vrerkkkekk
      121 hkpvleeqvt kesdvskipc kkvepvpvtk qptppseaaa skkkpgqkks knesddqdkk
      181 vesltapskk qeslplhqet kqesglgkkk vsskkqkten vlvdepliha ttyiplmdna
      241 dsnpvvdkre vidlikpdqv eviqktgakk lkietdkena evkfkdflls lktmmfseee
      301 alcvvdllke ksgviqdalk kynkgeltal vhqlqekdkl vtalkedaaa mkdrckqltq
      361 emmaekerss vvisrmkdri gtlekehnvf qnkmhvsyqe tqqmqmkfqq vreqmeaeia
      421 hlkqengilr davsntanql eskqsaelnk lrqdyarlvn eltektgklq qeevqkknae
      481 qavtqlkvql qeaerrweev qsyirkrtae heaaqqdlqs kfvakenevq slhskltdtl
      541 vskqqleqrl mqlmeseqkr vnkeeslqmq vqdileqnea lkaqiqqfhs qiaaqtsasa
      601 laeelhkvia ekdkqikqte dslanehdhl askeeelkdi qnmnfllkae vqklqalane
      661 qaaaahelek mqksihvkdd kirlleeqlq ceisnkmeef kilsdqnkal qlevqklqtl
      721 vseqpnkdvl eqmerciqek deklktveel letgliqvat keeelnairt enssltkevq
      781 dlkakqndqv sfaslveelk kvihekdgki ksveelleae llkvankekt iqdlkqeiea
      841 lkeeigniql ekaqqlsits qvqelqnllr gkeeqmnsmk taleekekdl ddrgrrlqdl
      901 qeeneslkth vqefaqhkfq eacsasqfee lqivlkeken emkrletmlk eresdlsnkt
      961 kllqevqden klfksqieel kqqnyqqass fppheellkg iserdkeitd lqnelhslkd
     1021 avehqrkknn erqqhveave leakevlkkl fpkvsvpsnl sysewlhgfe kkakecvaga
     1081 sgseevkdle hklkeademh tllqleceky ksvlaetegi lqklqrsveq eenkwkvkvd
     1141 esqktikqmq lsftsseqel drlrrenkdi enlrrerehl emelekaeme rstyvtevre
     1201 lkdlltelqk klddsyseav rqneelnllk kqlnethakl rteqserqkv agdlhkaqqs
     1261 ldliqskivk aagdttvien sdvsqemess eketmsvsln qtvtqlqqll qavnqqltke
     1321 kehyqvle
//
LOCUS       XP_061012973            1308 aa            linear   MAM 02-DEC-2023
DEFINITION  kinectin isoform X8 [Dama dama].
ACCESSION   XP_061012973
VERSION     XP_061012973.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156990.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1308
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1308
                     /product="kinectin isoform X8"
                     /calculated_mol_wt=150946
     Region          29..160
                     /region_name="Rib_recp_KP_reg"
                     /note="Ribosome receptor lysine/proline rich region;
                     pfam05104"
                     /db_xref="CDD:461548"
     Region          <272..>529
                     /region_name="CCDC158"
                     /note="Coiled-coil domain-containing protein 158;
                     pfam15921"
                     /db_xref="CDD:464943"
     Region          461..1227
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1308
                     /gene="KTN1"
                     /coded_by="XM_061156990.1:31..3957"
                     /db_xref="GeneID:133066184"
ORIGIN      
        1 mefyestyfi vlipsvvitv iflffwlfmk etlydevlak qkreqklipt ktdkkkaekk
       61 knkkkeiqng nlhesdsesv prdfklsdal avedeqvvpv plnvvespss vrerkkkekk
      121 hkpvleeqvt kesdvskipc kkvepvpvtk qptppseaaa skkkpgqkks knesddqdkk
      181 vesltapskk qeslplhqet kqesglgkkk vsskkqkten getflvdepl ihattyiplm
      241 dnadsnpvvd krevidlikp dqveviqktg akklkietdk enaevkfkdf llslktmmfs
      301 eeealcvvdl lkeksgviqd alkkynkgel talvhqlqek dklvtalked aaamkdrckq
      361 ltqemmaeke rssvvisrmk drigtlekeh nvfqnkmhvs yqetqqmqmk fqqvreqmea
      421 eiahlkqeng ilrdavsnta nqleskqsae lnklrqdyar lvneltektg klqqeevqkk
      481 naeqavtqlk vqlqeaerrw eevqsyirkr taeheaaqqd lqskfvaken evqslhsklt
      541 dtlvskqqle qrlmqlmese qkrvnkeesl qmqvqdileq nealkaqiqq fhsqiaaqts
      601 asalaeelhk viaekdkqik qtedslaneh dhlaskeeel kdiqnmnfll kaevqklqal
      661 aneqaaaahe lekmqksihv kddkirllee qlqceisnkm eefkilsdqn kalqlevqkl
      721 qtlvseqpnk dvleqmerci qekdeklktv eelletgliq vatkeeelna irtenssltk
      781 evqdlkakqn dqvsfaslve elkkvihekd gkiksveell eaellkvank ektiqdlkqe
      841 iealkeeign iqlekaqqls itsqvqelqn llrgkeeqmn smktaleeke kdlddrgrrl
      901 qdlqeenesl kthvqefaqh kfqeacsasq feelqivlke kenemkrlet mlkeresdls
      961 nktkllqevq denklfksqi eelkqqnyqq assfppheel lkgiserdke itdlqnelhs
     1021 lkdavehqrk knndlreknw eamealaste kllqdkvnkt skerqqhvea veleakevlk
     1081 klfpkvsvps nlsysewlhg fekkakecva gasgseevkd lehklkeade mhtllqlece
     1141 kyksvlaete gilqklqrsv eqeenkwkvk vdesqktikq lrrerehlem elekaemers
     1201 tyvtevrelk kqlnethakl rteqserqkv agdlhkaqqs ldliqskivk aagdttvien
     1261 sdvsqemess eketmsvsln qtvtqlqqll qavnqqltke kehyqvle
//
LOCUS       XP_061012974            1303 aa            linear   MAM 02-DEC-2023
DEFINITION  kinectin isoform X9 [Dama dama].
ACCESSION   XP_061012974
VERSION     XP_061012974.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156991.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1303
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1303
                     /product="kinectin isoform X9"
                     /calculated_mol_wt=150508
     Region          29..160
                     /region_name="Rib_recp_KP_reg"
                     /note="Ribosome receptor lysine/proline rich region;
                     pfam05104"
                     /db_xref="CDD:461548"
     Region          <272..>529
                     /region_name="CCDC158"
                     /note="Coiled-coil domain-containing protein 158;
                     pfam15921"
                     /db_xref="CDD:464943"
     Region          461..1222
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1303
                     /gene="KTN1"
                     /coded_by="XM_061156991.1:31..3942"
                     /db_xref="GeneID:133066184"
ORIGIN      
        1 mefyestyfi vlipsvvitv iflffwlfmk etlydevlak qkreqklipt ktdkkkaekk
       61 knkkkeiqng nlhesdsesv prdfklsdal avedeqvvpv plnvvespss vrerkkkekk
      121 hkpvleeqvt kesdvskipc kkvepvpvtk qptppseaaa skkkpgqkks knesddqdkk
      181 vesltapskk qeslplhqet kqesglgkkk vsskkqkten getflvdepl ihattyiplm
      241 dnadsnpvvd krevidlikp dqveviqktg akklkietdk enaevkfkdf llslktmmfs
      301 eeealcvvdl lkeksgviqd alkkynkgel talvhqlqek dklvtalked aaamkdrckq
      361 ltqemmaeke rssvvisrmk drigtlekeh nvfqnkmhvs yqetqqmqmk fqqvreqmea
      421 eiahlkqeng ilrdavsnta nqleskqsae lnklrqdyar lvneltektg klqqeevqkk
      481 naeqavtqlk vqlqeaerrw eevqsyirkr taeheaaqqd lqskfvaken evqslhsklt
      541 dtlvskqqle qrlmqlmese qkrvnkeesl qmqvqdileq nealkaqiqq fhsqiaaqts
      601 asalaeelhk viaekdkqik qtedslaneh dhlaskeeel kdiqnmnfll kaevqklqal
      661 aneqaaaahe lekmqksihv kddkirllee qlqceisnkm eefkilsdqn kalqlevqkl
      721 qtlvseqpnk dvleqmerci qekdeklktv eelletgliq vatkeeelna irtenssltk
      781 evqdlkakqn dqvsfaslve elkkvihekd gkiksveell eaellkvank ektiqdlkqe
      841 iealkeeign iqlekaqqls itsqvqelqn llrgkeeqmn smktaleeke kdlddrgrrl
      901 qdlqeenesl kthvqefaqh kfqeacsasq feelqivlke kenemkrlet mlkeresdls
      961 nktkllqevq denklfksqi eelkqqnyqq assfppheel lkgiserdke itdlqnelhs
     1021 lkdavehqrk knnerqqhve aveleakevl kklfpkvsvp snlsysewlh gfekkakecv
     1081 agasgseevk dlehklkead emhtllqlec ekyksvlaet egilqklqrs veqeenkwkv
     1141 kvdesqktik qmqlsftsse qeldrlrren kdienlrrer ehlemeleka emerstyvte
     1201 vrelkkqlne thaklrteqs erqkvagdlh kaqqsldliq skivkaagdt tviensdvsq
     1261 emesseketm svslnqtvtq lqqllqavnq qltkekehyq vle
//
LOCUS       XP_061012975            1300 aa            linear   MAM 02-DEC-2023
DEFINITION  kinectin isoform X10 [Dama dama].
ACCESSION   XP_061012975
VERSION     XP_061012975.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156992.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1300
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1300
                     /product="kinectin isoform X10"
                     /calculated_mol_wt=150173
     Region          29..160
                     /region_name="Rib_recp_KP_reg"
                     /note="Ribosome receptor lysine/proline rich region;
                     pfam05104"
                     /db_xref="CDD:461548"
     Region          <269..>526
                     /region_name="CCDC158"
                     /note="Coiled-coil domain-containing protein 158;
                     pfam15921"
                     /db_xref="CDD:464943"
     Region          458..1219
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1300
                     /gene="KTN1"
                     /coded_by="XM_061156992.1:31..3933"
                     /db_xref="GeneID:133066184"
ORIGIN      
        1 mefyestyfi vlipsvvitv iflffwlfmk etlydevlak qkreqklipt ktdkkkaekk
       61 knkkkeiqng nlhesdsesv prdfklsdal avedeqvvpv plnvvespss vrerkkkekk
      121 hkpvleeqvt kesdvskipc kkvepvpvtk qptppseaaa skkkpgqkks knesddqdkk
      181 vesltapskk qeslplhqet kqesglgkkk vsskkqkten vlvdepliha ttyiplmdna
      241 dsnpvvdkre vidlikpdqv eviqktgakk lkietdkena evkfkdflls lktmmfseee
      301 alcvvdllke ksgviqdalk kynkgeltal vhqlqekdkl vtalkedaaa mkdrckqltq
      361 emmaekerss vvisrmkdri gtlekehnvf qnkmhvsyqe tqqmqmkfqq vreqmeaeia
      421 hlkqengilr davsntanql eskqsaelnk lrqdyarlvn eltektgklq qeevqkknae
      481 qavtqlkvql qeaerrweev qsyirkrtae heaaqqdlqs kfvakenevq slhskltdtl
      541 vskqqleqrl mqlmeseqkr vnkeeslqmq vqdileqnea lkaqiqqfhs qiaaqtsasa
      601 laeelhkvia ekdkqikqte dslanehdhl askeeelkdi qnmnfllkae vqklqalane
      661 qaaaahelek mqksihvkdd kirlleeqlq ceisnkmeef kilsdqnkal qlevqklqtl
      721 vseqpnkdvl eqmerciqek deklktveel letgliqvat keeelnairt enssltkevq
      781 dlkakqndqv sfaslveelk kvihekdgki ksveelleae llkvankekt iqdlkqeiea
      841 lkeeigniql ekaqqlsits qvqelqnllr gkeeqmnsmk taleekekdl ddrgrrlqdl
      901 qeeneslkth vqefaqhkfq eacsasqfee lqivlkeken emkrletmlk eresdlsnkt
      961 kllqevqden klfksqieel kqqnyqqass fppheellkg iserdkeitd lqnelhslkd
     1021 avehqrkknn erqqhveave leakevlkkl fpkvsvpsnl sysewlhgfe kkakecvaga
     1081 sgseevkdle hklkeademh tllqleceky ksvlaetegi lqklqrsveq eenkwkvkvd
     1141 esqktikqmq lsftsseqel drlrrenkdi enlrrerehl emelekaeme rstyvtevre
     1201 lkkqlnetha klrteqserq kvagdlhkaq qsldliqski vkaagdttvi ensdvsqeme
     1261 sseketmsvs lnqtvtqlqq llqavnqqlt kekehyqvle
//
LOCUS       XP_061012976             492 aa            linear   MAM 02-DEC-2023
DEFINITION  beclin 1-associated autophagy-related key regulator isoform X1
            [Dama dama].
ACCESSION   XP_061012976
VERSION     XP_061012976.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156993.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..492
                     /product="beclin 1-associated autophagy-related key
                     regulator isoform X1"
                     /calculated_mol_wt=55309
     Region          43..388
                     /region_name="ATG14"
                     /note="Vacuolar sorting 38 and autophagy-related subunit
                     14; pfam10186"
                     /db_xref="CDD:462986"
     CDS             1..492
                     /gene="ATG14"
                     /coded_by="XM_061156993.1:18..1496"
                     /db_xref="GeneID:133066186"
ORIGIN      
        1 maspsgkgaq aqeapgcgpq plardlvdsv ddaeglyvav ercplcnttr rrltcakciq
       61 sgdfvyfdgr drerfidkke rlsqlkskqe efqkevlram egkwmtdqlr wkimsckmri
      121 eqlkqtickg neemkknteg llktkeknqk lytraqrhqe kkekiqrhnr klgdlvekkn
      181 mdlrshyerl adlrrshile ltsvifpiee vktgardpad vssesdsamt sstvsklaea
      241 rrttylsgrw vcddhngdts isitgpwisl pnngdysayy nwveekkttq gpdmehnnpa
      301 ytisaalcya tqlvnilshi ldinlpkklc nsefcgenls rqkftravkk lnanilylcf
      361 sqhvnldqlq plhtlrnlmy lvspnsehlg rsgpfevrad leesmefvdp gvagesdesg
      421 dehvsdeetd lgtdwenlps prfcdipsqp vevsqsqssq asppiasssa ggmissaaas
      481 vtswfkaytg hr
//
LOCUS       XP_061012977             423 aa            linear   MAM 02-DEC-2023
DEFINITION  beclin 1-associated autophagy-related key regulator isoform X2
            [Dama dama].
ACCESSION   XP_061012977
VERSION     XP_061012977.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156994.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..423
                     /product="beclin 1-associated autophagy-related key
                     regulator isoform X2"
                     /calculated_mol_wt=48083
     Region          43..388
                     /region_name="ATG14"
                     /note="Vacuolar sorting 38 and autophagy-related subunit
                     14; pfam10186"
                     /db_xref="CDD:462986"
     CDS             1..423
                     /gene="ATG14"
                     /coded_by="XM_061156994.1:18..1289"
                     /db_xref="GeneID:133066186"
ORIGIN      
        1 maspsgkgaq aqeapgcgpq plardlvdsv ddaeglyvav ercplcnttr rrltcakciq
       61 sgdfvyfdgr drerfidkke rlsqlkskqe efqkevlram egkwmtdqlr wkimsckmri
      121 eqlkqtickg neemkknteg llktkeknqk lytraqrhqe kkekiqrhnr klgdlvekkn
      181 mdlrshyerl adlrrshile ltsvifpiee vktgardpad vssesdsamt sstvsklaea
      241 rrttylsgrw vcddhngdts isitgpwisl pnngdysayy nwveekkttq gpdmehnnpa
      301 ytisaalcya tqlvnilshi ldinlpkklc nsefcgenls rqkftravkk lnanilylcf
      361 sqhvnldqlq plhtlrnlmy lvspnsehlg rsgpfevrad leesmefvdp gvagesdesg
      421 deh
//
LOCUS       XP_061012978             713 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box only protein 34 [Dama dama].
ACCESSION   XP_061012978
VERSION     XP_061012978.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156995.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..713
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..713
                     /product="F-box only protein 34"
                     /calculated_mol_wt=78669
     Region          577..624
                     /region_name="F-box_FBXO34"
                     /note="F-box domain found in F-box only protein 34
                     (FBXO34) and similar proteins; cd22176"
                     /db_xref="CDD:438947"
     Site            order(580,584,587..588,591..592,596,598..599,603..605,607)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438947"
     CDS             1..713
                     /gene="FBXO34"
                     /coded_by="XM_061156995.1:155..2296"
                     /db_xref="GeneID:133066187"
ORIGIN      
        1 mhlkpywkfq kkgqpleigt qtlrtpmshq raisdeecka scmkssvfps aslgkassrk
       61 pfgilspnvl csmsgkspee sslnvktkkn vpsatihqge egegpldiwa vvkpgntkek
      121 iaffaahqcs nrigsmkiks swdidgratk rrkksgdlkk akiqlermke vnsrcyqpep
      181 facgiehcsv hyvsdggdgm yagrplsviq mvafleqras allascaknc thspavvrfs
      241 gqsrggppap eplsapgace epaerrnpev gepqgepvrv ldmvarlese clkrqsqrep
      301 gslsrnnsfr rnvgrvllvn gtqaeeskae kgalevpdtq vktvgsvsvg csplradrcs
      361 pqgdqawdga prgcpslpag lslhtdsael epdqqtamks snrhdvemte elvgppfppr
      421 tcpqaielpt davdgiseel vplanqnpdq rkkeslcisi tvskvekdqp srsescedpl
      481 pgmlfflpsg qhqsghsqsn eatteessea sqleevaegd sapeeksasa dafvplaspv
      541 estlpvleas swkkqvshdf letrfkiqql lepqqymafl phhimvkifr llptkslval
      601 kctccyfkfi ieyynirpad srwvrdpryr edpckqckkk yvrgdvslcr whpkpycqal
      661 pygpgywmcc hrsqkgfpgc klglhdnhwv pachsfnrai hkkakgteae eey
//
LOCUS       XP_061012979             713 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box only protein 34 [Dama dama].
ACCESSION   XP_061012979
VERSION     XP_061012979.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156996.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..713
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..713
                     /product="F-box only protein 34"
                     /calculated_mol_wt=78669
     Region          577..624
                     /region_name="F-box_FBXO34"
                     /note="F-box domain found in F-box only protein 34
                     (FBXO34) and similar proteins; cd22176"
                     /db_xref="CDD:438947"
     Site            order(580,584,587..588,591..592,596,598..599,603..605,607)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438947"
     CDS             1..713
                     /gene="FBXO34"
                     /coded_by="XM_061156996.1:235..2376"
                     /db_xref="GeneID:133066187"
ORIGIN      
        1 mhlkpywkfq kkgqpleigt qtlrtpmshq raisdeecka scmkssvfps aslgkassrk
       61 pfgilspnvl csmsgkspee sslnvktkkn vpsatihqge egegpldiwa vvkpgntkek
      121 iaffaahqcs nrigsmkiks swdidgratk rrkksgdlkk akiqlermke vnsrcyqpep
      181 facgiehcsv hyvsdggdgm yagrplsviq mvafleqras allascaknc thspavvrfs
      241 gqsrggppap eplsapgace epaerrnpev gepqgepvrv ldmvarlese clkrqsqrep
      301 gslsrnnsfr rnvgrvllvn gtqaeeskae kgalevpdtq vktvgsvsvg csplradrcs
      361 pqgdqawdga prgcpslpag lslhtdsael epdqqtamks snrhdvemte elvgppfppr
      421 tcpqaielpt davdgiseel vplanqnpdq rkkeslcisi tvskvekdqp srsescedpl
      481 pgmlfflpsg qhqsghsqsn eatteessea sqleevaegd sapeeksasa dafvplaspv
      541 estlpvleas swkkqvshdf letrfkiqql lepqqymafl phhimvkifr llptkslval
      601 kctccyfkfi ieyynirpad srwvrdpryr edpckqckkk yvrgdvslcr whpkpycqal
      661 pygpgywmcc hrsqkgfpgc klglhdnhwv pachsfnrai hkkakgteae eey
//
LOCUS       XP_061012980             713 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box only protein 34 [Dama dama].
ACCESSION   XP_061012980
VERSION     XP_061012980.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156997.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..713
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..713
                     /product="F-box only protein 34"
                     /calculated_mol_wt=78669
     Region          577..624
                     /region_name="F-box_FBXO34"
                     /note="F-box domain found in F-box only protein 34
                     (FBXO34) and similar proteins; cd22176"
                     /db_xref="CDD:438947"
     Site            order(580,584,587..588,591..592,596,598..599,603..605,607)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438947"
     CDS             1..713
                     /gene="FBXO34"
                     /coded_by="XM_061156997.1:283..2424"
                     /db_xref="GeneID:133066187"
ORIGIN      
        1 mhlkpywkfq kkgqpleigt qtlrtpmshq raisdeecka scmkssvfps aslgkassrk
       61 pfgilspnvl csmsgkspee sslnvktkkn vpsatihqge egegpldiwa vvkpgntkek
      121 iaffaahqcs nrigsmkiks swdidgratk rrkksgdlkk akiqlermke vnsrcyqpep
      181 facgiehcsv hyvsdggdgm yagrplsviq mvafleqras allascaknc thspavvrfs
      241 gqsrggppap eplsapgace epaerrnpev gepqgepvrv ldmvarlese clkrqsqrep
      301 gslsrnnsfr rnvgrvllvn gtqaeeskae kgalevpdtq vktvgsvsvg csplradrcs
      361 pqgdqawdga prgcpslpag lslhtdsael epdqqtamks snrhdvemte elvgppfppr
      421 tcpqaielpt davdgiseel vplanqnpdq rkkeslcisi tvskvekdqp srsescedpl
      481 pgmlfflpsg qhqsghsqsn eatteessea sqleevaegd sapeeksasa dafvplaspv
      541 estlpvleas swkkqvshdf letrfkiqql lepqqymafl phhimvkifr llptkslval
      601 kctccyfkfi ieyynirpad srwvrdpryr edpckqckkk yvrgdvslcr whpkpycqal
      661 pygpgywmcc hrsqkgfpgc klglhdnhwv pachsfnrai hkkakgteae eey
//
LOCUS       XP_061012981             713 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box only protein 34 [Dama dama].
ACCESSION   XP_061012981
VERSION     XP_061012981.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156998.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..713
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..713
                     /product="F-box only protein 34"
                     /calculated_mol_wt=78669
     Region          577..624
                     /region_name="F-box_FBXO34"
                     /note="F-box domain found in F-box only protein 34
                     (FBXO34) and similar proteins; cd22176"
                     /db_xref="CDD:438947"
     Site            order(580,584,587..588,591..592,596,598..599,603..605,607)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438947"
     CDS             1..713
                     /gene="FBXO34"
                     /coded_by="XM_061156998.1:270..2411"
                     /db_xref="GeneID:133066187"
ORIGIN      
        1 mhlkpywkfq kkgqpleigt qtlrtpmshq raisdeecka scmkssvfps aslgkassrk
       61 pfgilspnvl csmsgkspee sslnvktkkn vpsatihqge egegpldiwa vvkpgntkek
      121 iaffaahqcs nrigsmkiks swdidgratk rrkksgdlkk akiqlermke vnsrcyqpep
      181 facgiehcsv hyvsdggdgm yagrplsviq mvafleqras allascaknc thspavvrfs
      241 gqsrggppap eplsapgace epaerrnpev gepqgepvrv ldmvarlese clkrqsqrep
      301 gslsrnnsfr rnvgrvllvn gtqaeeskae kgalevpdtq vktvgsvsvg csplradrcs
      361 pqgdqawdga prgcpslpag lslhtdsael epdqqtamks snrhdvemte elvgppfppr
      421 tcpqaielpt davdgiseel vplanqnpdq rkkeslcisi tvskvekdqp srsescedpl
      481 pgmlfflpsg qhqsghsqsn eatteessea sqleevaegd sapeeksasa dafvplaspv
      541 estlpvleas swkkqvshdf letrfkiqql lepqqymafl phhimvkifr llptkslval
      601 kctccyfkfi ieyynirpad srwvrdpryr edpckqckkk yvrgdvslcr whpkpycqal
      661 pygpgywmcc hrsqkgfpgc klglhdnhwv pachsfnrai hkkakgteae eey
//
LOCUS       XP_061012982             713 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box only protein 34 [Dama dama].
ACCESSION   XP_061012982
VERSION     XP_061012982.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061156999.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..713
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..713
                     /product="F-box only protein 34"
                     /calculated_mol_wt=78669
     Region          577..624
                     /region_name="F-box_FBXO34"
                     /note="F-box domain found in F-box only protein 34
                     (FBXO34) and similar proteins; cd22176"
                     /db_xref="CDD:438947"
     Site            order(580,584,587..588,591..592,596,598..599,603..605,607)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438947"
     CDS             1..713
                     /gene="FBXO34"
                     /coded_by="XM_061156999.1:32..2173"
                     /db_xref="GeneID:133066187"
ORIGIN      
        1 mhlkpywkfq kkgqpleigt qtlrtpmshq raisdeecka scmkssvfps aslgkassrk
       61 pfgilspnvl csmsgkspee sslnvktkkn vpsatihqge egegpldiwa vvkpgntkek
      121 iaffaahqcs nrigsmkiks swdidgratk rrkksgdlkk akiqlermke vnsrcyqpep
      181 facgiehcsv hyvsdggdgm yagrplsviq mvafleqras allascaknc thspavvrfs
      241 gqsrggppap eplsapgace epaerrnpev gepqgepvrv ldmvarlese clkrqsqrep
      301 gslsrnnsfr rnvgrvllvn gtqaeeskae kgalevpdtq vktvgsvsvg csplradrcs
      361 pqgdqawdga prgcpslpag lslhtdsael epdqqtamks snrhdvemte elvgppfppr
      421 tcpqaielpt davdgiseel vplanqnpdq rkkeslcisi tvskvekdqp srsescedpl
      481 pgmlfflpsg qhqsghsqsn eatteessea sqleevaegd sapeeksasa dafvplaspv
      541 estlpvleas swkkqvshdf letrfkiqql lepqqymafl phhimvkifr llptkslval
      601 kctccyfkfi ieyynirpad srwvrdpryr edpckqckkk yvrgdvslcr whpkpycqal
      661 pygpgywmcc hrsqkgfpgc klglhdnhwv pachsfnrai hkkakgteae eey
//
LOCUS       XP_061012984             846 aa            linear   MAM 02-DEC-2023
DEFINITION  disks large-associated protein 5 isoform X1 [Dama dama].
ACCESSION   XP_061012984
VERSION     XP_061012984.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157001.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..846
                     /product="disks large-associated protein 5 isoform X1"
                     /calculated_mol_wt=95523
     Region          <414..595
                     /region_name="GKAP"
                     /note="Guanylate-kinase-associated protein (GKAP) protein;
                     pfam03359"
                     /db_xref="CDD:460897"
     CDS             1..846
                     /gene="DLGAP5"
                     /coded_by="XM_061157001.1:148..2688"
                     /db_xref="GeneID:133066189"
ORIGIN      
        1 mssshfasrh rkdlstdmir tkiahrksls qkenrhkeye rnrhfglkdv niptlesrsl
       61 leldetfqel vpekaiikpk stktvvfdqr kqmlqkykee kqlqklkeqr ekakrgvfkv
      121 glyrpdmpcf lfsnqnamka epkkavpssv ritrskardq meltksdngi dvrasrpgqr
      181 qtsekkvldk ekkavqpvml pvrmtrsstq aakqivkeip staarkpetr aingneadrk
      241 apnqgkpakk igtkldkvis fkvdneentl dsqtratngm ntdgvlskme nlsktnsakm
      301 kgknsfapkd fifqpldglr tyqvtpmtpr sanafltpsy twtplntevd kteatkeila
      361 qkcktfsakt vpqdssksqc plgsltvwsk ehvsnknett nessnslsvk eevpslevne
      421 dqlsqpqhdv pyfrnilrse tekltsycle wdrkldldip ddakdlirta vgqtrllmke
      481 rfkqfeglvd nceykrgeke ttctdldgfw dmvnfqiedv nqkfsnltkl eesewqnnnn
      541 tskkvfrkkv vsgiaskpkq ddggriaarn rlaaiknamr erikqeeqae aaasvmpkev
      601 dkivfdagff riespiksfs glsseclsqr lktpksvskt vsetraemgl vrqttspenp
      661 dpqgaksepv dktlisnipg nrnstgedak clglqdliei nhginkinfe igclssermn
      721 lalhaskvad dintnkkeei sdvvegmeln svttqdvlmi spekniqsqn nisweeetkt
      781 sqsvlcdnks lttechllds pglncsntft qmerrhqeqt rhisfggnli sfsplrplsg
      841 eqpeef
//
LOCUS       XP_061012985             811 aa            linear   MAM 02-DEC-2023
DEFINITION  disks large-associated protein 5 isoform X2 [Dama dama].
ACCESSION   XP_061012985
VERSION     XP_061012985.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157002.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..811
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..811
                     /product="disks large-associated protein 5 isoform X2"
                     /calculated_mol_wt=91572
     Region          <414..595
                     /region_name="GKAP"
                     /note="Guanylate-kinase-associated protein (GKAP) protein;
                     pfam03359"
                     /db_xref="CDD:460897"
     CDS             1..811
                     /gene="DLGAP5"
                     /coded_by="XM_061157002.1:148..2583"
                     /db_xref="GeneID:133066189"
ORIGIN      
        1 mssshfasrh rkdlstdmir tkiahrksls qkenrhkeye rnrhfglkdv niptlesrsl
       61 leldetfqel vpekaiikpk stktvvfdqr kqmlqkykee kqlqklkeqr ekakrgvfkv
      121 glyrpdmpcf lfsnqnamka epkkavpssv ritrskardq meltksdngi dvrasrpgqr
      181 qtsekkvldk ekkavqpvml pvrmtrsstq aakqivkeip staarkpetr aingneadrk
      241 apnqgkpakk igtkldkvis fkvdneentl dsqtratngm ntdgvlskme nlsktnsakm
      301 kgknsfapkd fifqpldglr tyqvtpmtpr sanafltpsy twtplntevd kteatkeila
      361 qkcktfsakt vpqdssksqc plgsltvwsk ehvsnknett nessnslsvk eevpslevne
      421 dqlsqpqhdv pyfrnilrse tekltsycle wdrkldldip ddakdlirta vgqtrllmke
      481 rfkqfeglvd nceykrgeke ttctdldgfw dmvnfqiedv nqkfsnltkl eesewqnnnn
      541 tskkvfrkkv vsgiaskpkq ddggriaarn rlaaiknamr erikqeeqae aaasvmpkev
      601 dkivfdagff riespiksfs glsseclsqr lktpksvskt vsetraemgl vrqttspenp
      661 dpqgaksepv dktlisnipg nrnstgedak clglqdliei nhginkinfe igclssermn
      721 lalhaskvad dintnkkeei sdvvegmeln svttqdvlmi spekniqsqn nisweeetkt
      781 sqsvlcdnks lttechllds sclirihgcw h
//
LOCUS       XP_061012986             801 aa            linear   MAM 02-DEC-2023
DEFINITION  disks large-associated protein 5 isoform X3 [Dama dama].
ACCESSION   XP_061012986
VERSION     XP_061012986.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157003.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..801
                     /product="disks large-associated protein 5 isoform X3"
                     /calculated_mol_wt=90337
     Region          <414..595
                     /region_name="GKAP"
                     /note="Guanylate-kinase-associated protein (GKAP) protein;
                     pfam03359"
                     /db_xref="CDD:460897"
     CDS             1..801
                     /gene="DLGAP5"
                     /coded_by="XM_061157003.1:148..2553"
                     /db_xref="GeneID:133066189"
ORIGIN      
        1 mssshfasrh rkdlstdmir tkiahrksls qkenrhkeye rnrhfglkdv niptlesrsl
       61 leldetfqel vpekaiikpk stktvvfdqr kqmlqkykee kqlqklkeqr ekakrgvfkv
      121 glyrpdmpcf lfsnqnamka epkkavpssv ritrskardq meltksdngi dvrasrpgqr
      181 qtsekkvldk ekkavqpvml pvrmtrsstq aakqivkeip staarkpetr aingneadrk
      241 apnqgkpakk igtkldkvis fkvdneentl dsqtratngm ntdgvlskme nlsktnsakm
      301 kgknsfapkd fifqpldglr tyqvtpmtpr sanafltpsy twtplntevd kteatkeila
      361 qkcktfsakt vpqdssksqc plgsltvwsk ehvsnknett nessnslsvk eevpslevne
      421 dqlsqpqhdv pyfrnilrse tekltsycle wdrkldldip ddakdlirta vgqtrllmke
      481 rfkqfeglvd nceykrgeke ttctdldgfw dmvnfqiedv nqkfsnltkl eesewqnnnn
      541 tskkvfrkkv vsgiaskpkq ddggriaarn rlaaiknamr erikqeeqae aaasvmpkev
      601 dkivfdagff riespiksfs glsseclsqr lktpksvskt vsetraemgl vrqttspenp
      661 dpqgaksepv dktlisnipg nrnstgedak clglqdliei nhginkinfe igclssermn
      721 lalhaskvad dintnkkeei sdvvegmeln svttqdvlmi spekniqsqn nisweeetkt
      781 sqsvlcdnks lttechllds a
//
LOCUS       XP_061012987             283 aa            linear   MAM 02-DEC-2023
DEFINITION  galectin-3 [Dama dama].
ACCESSION   XP_061012987
VERSION     XP_061012987.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157004.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..283
                     /product="galectin-3"
                     /calculated_mol_wt=29167
     Region          <14..>157
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Site            order(151..155,274..277)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238025"
     Site            151..155
                     /site_type="active"
                     /note="dimerization swap strand [active]"
                     /db_xref="CDD:238025"
     Region          156..277
                     /region_name="Gal-bind_lectin"
                     /note="Galactoside-binding lectin; smart00908"
                     /db_xref="CDD:214904"
     Site            order(160..162,165,168,236..238,243,245,248)
                     /site_type="other"
                     /note="putative alternate dimerization interface
                     [polypeptide binding]"
                     /db_xref="CDD:238025"
     Site            order(191,193,195,205,207,214,217,219)
                     /site_type="other"
                     /note="sugar binding pocket [chemical binding]"
                     /db_xref="CDD:238025"
     CDS             1..283
                     /gene="LGALS3"
                     /coded_by="XM_061157004.1:137..988"
                     /db_xref="GeneID:133066190"
ORIGIN      
        1 madgfslnda lsgpgkpnpq gwpgswgnqp agaggypgaa ypgaypgqgp pgaypgqgpp
       61 gaypgqgppg aypgqgppga ypgqgppgay pgqgppgayp gptapaypgp tapgaypgpg
      121 aypppaqpsa pgaypaaspy gvpsgplnvp ydlpfpggim prmlitilgt vkpnanrlal
      181 dfkrgndiaf hfnprfnedn rkvivcnsnl nnnwgkeerq mvfpfesgkp fkiqvlvepd
      241 hfkvavndah llqynhrvkn fgeistlris gditltsash tmi
//
LOCUS       XP_061012988             214 aa            linear   MAM 02-DEC-2023
DEFINITION  low molecular weight phosphotyrosine protein phosphatase-like [Dama
            dama].
ACCESSION   XP_061012988
VERSION     XP_061012988.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157005.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..214
                     /product="low molecular weight phosphotyrosine protein
                     phosphatase-like"
                     /calculated_mol_wt=24234
     Region          9..151
                     /region_name="LMWPTP"
                     /note="Low molecular weight protein tyrosine phosphatase;
                     cd16343"
                     /db_xref="CDD:319971"
     Site            order(13..20,51,130,132)
                     /site_type="active"
                     /db_xref="CDD:319971"
     CDS             1..214
                     /gene="LOC133066191"
                     /coded_by="XM_061157005.1:26..670"
                     /db_xref="GeneID:133066191"
ORIGIN      
        1 maeqvtklvl fvclgnicrs piaeavfrkl vtdqnisdnw ridsaatsty elgnppdyrg
       61 qacmkkhgir mshvarqvtk edfatfdyil cmdesnlrdl nrksnqvknc rakiellgsy
      121 dpqkqliied pyygndadfe tvyqqrvrcc rpswrrsadq avplwprlvp pghvstvnsv
      181 pseprpqpsl qltrcfspdk iivdgnqslc lake
//
LOCUS       XP_061012989             240 aa            linear   MAM 02-DEC-2023
DEFINITION  MAPK-interacting and spindle-stabilizing protein-like [Dama dama].
ACCESSION   XP_061012989
VERSION     XP_061012989.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157006.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..240
                     /product="MAPK-interacting and spindle-stabilizing
                     protein-like"
                     /calculated_mol_wt=23667
     Region          5..237
                     /region_name="MISS"
                     /note="MAPK-interacting and spindle-stabilising
                     protein-like; pfam15822"
                     /db_xref="CDD:318115"
     CDS             1..240
                     /gene="MAPK1IP1L"
                     /coded_by="XM_061157006.1:138..860"
                     /db_xref="GeneID:133066192"
ORIGIN      
        1 msdefslada lpenspakts avsntkpgqp pqgwpgsnpw nnpsappavp sglppsatps
       61 pvpfgptptg mypsvpptgp ppgppapfpp sgpscpppgg pypgpgptgp yptpnmpfpe
      121 lprpygaptd paaagplgpw gsmssgpwap gmggqyptpn mpypspgpyp appppqapga
      181 appvpwgtvp pgawgppapy papagsyptp glyptpnnpf qvpsgpsgap pmpggphsyh
//
LOCUS       XP_061012990             440 aa            linear   MAM 02-DEC-2023
DEFINITION  suppressor of cytokine signaling 4 [Dama dama].
ACCESSION   XP_061012990
VERSION     XP_061012990.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157007.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..440
                     /product="suppressor of cytokine signaling 4"
                     /calculated_mol_wt=50073
     Region          58..111
                     /region_name="SOCS"
                     /note="Suppressor of cytokine signalling; pfam12610"
                     /db_xref="CDD:432667"
     Region          275..375
                     /region_name="SH2_SOCS4"
                     /note="Src homology 2 (SH2) domain found in suppressor of
                     cytokine signaling (SOCS) proteins; cd10385"
                     /db_xref="CDD:198248"
     Site            order(283,285)
                     /site_type="other"
                     /note="Elongin-C binding interface [polypeptide binding]"
                     /db_xref="CDD:198248"
     Site            order(293,311,313,321,334)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198248"
     Site            order(344,346,364)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198248"
     Region          384..439
                     /region_name="SOCS_SOCS4"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     SOCS4-like proteins. Together with CIS1, the CIS/SOCS
                     family of proteins is characterized by the presence of a
                     C-terminal SOCS box and a central SH2 domain. The general
                     function of the SOCS box is the...; cd03738"
                     /db_xref="CDD:239707"
     Site            order(385..390,396,403,409,414)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239707"
     CDS             1..440
                     /gene="SOCS4"
                     /coded_by="XM_061157007.1:412..1734"
                     /db_xref="GeneID:133066193"
ORIGIN      
        1 maensesnsk nvdvrpktsr srsadrkdgy vwsgkklsws kksescsdae tvsaieksev
       61 plrsqerkhs cssieldldh scghrflgrs lkqklqdavg qcfpikncss rhssglpskr
      121 kihiselmld kcpfpprsdl afrwhfikrh tapispksde wvstdlsqse lrdgqlkqrr
      181 nmeevscfsh tsvqpcvits nnssgrggpg tdsivnlasn nsiedsdmds ddeiitlcts
      241 srkrnkpkwe ideeilqlet ppkyhtqidy vhclvpdllq innnpcywgv mdkyaaeall
      301 egkpegtfll rdsaqedylf svsfrrysrs lharieqwnh nfsfdahdpc vfhspditgl
      361 lehykdpsac mffepllstp lirtfpfslq hicrtvicnc ttydgidalp ipssmklylk
      421 eyhykskvrv lridapeqqc
//
LOCUS       XP_061012991            1129 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat and HMG-box DNA-binding protein 1 [Dama dama].
ACCESSION   XP_061012991
VERSION     XP_061012991.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157008.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1129
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1129
                     /product="WD repeat and HMG-box DNA-binding protein 1"
                     /calculated_mol_wt=125391
     Region          10..289
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(12,30,34,40,42,54..55,69,73,79..80,92..93,110,115,
                     121..122,135,152,157,163..164,182,185,203,207,213,
                     224..225,246,251,257..258,270)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          17..54
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          59..92
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          97..133
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          140..175
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          189..225
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          233..269
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          430..713
                     /region_name="Mcl1_mid"
                     /note="Minichromosome loss protein, Mcl1, middle region;
                     pfam12341"
                     /db_xref="CDD:463539"
     Region          1015..1077
                     /region_name="HMG-box_WDHD1"
                     /note="high mobility group (HMG)-box found in WD repeat
                     and HMG-box DNA-binding protein 1 (WDHD1) and similar
                     proteins; cd21993"
                     /db_xref="CDD:438809"
     Site            order(1017..1018,1020..1024,1027..1028,1035,1048..1049,
                     1052,1055..1056,1063,1067,1070,1074,1077)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438809"
     CDS             1..1129
                     /gene="WDHD1"
                     /coded_by="XM_061157008.1:120..3509"
                     /db_xref="GeneID:133066194"
ORIGIN      
        1 mpatqkpmry ghteghtdvc fddsgscivt cgsdgdvriw edlddddpks invgekaysc
       61 alkngklvta vsnntiqvht fpegvpdgil trfttnanhv vfngdgtkia agssdflvki
      121 vdvmdcsqqk tfrghdapvl slsfdpkdif lasascdgsv kvwqisdqtc piswpvlqkc
      181 ndvvnaksic rlawqpksgk llavpvdksv klyrretwsn qfdlsdnfis qtlnivtwsp
      241 cgqylaagsi ngliiiwnve tknciervkh ekgyaicgls whptcgqiay tdaegnlgll
      301 envcdpngkm snskvssrve kdyndlfdgd dtsnvgdcln dnavkthsfs kgivndeedd
      361 ddvmlasgrp rqrshiledd ensvdvtmlk igsslfkeee ddqggsmhsl pvvtsqrpfy
      421 dgpmptprqk pfqsgstplh lthrfmvwns igiircynde qdnaidvefh dtsihhathl
      481 sntlnytvad lsheavllac estdelaskl hclhlsswds skewivdmpp nedieaiclg
      541 qgwaaaatss lllrlftigg vqkevfslpg pivsmaghge qlvivyhrgt gfdgdqclgv
      601 qllelgkkkk qilhgdplpl trksylvwvg fsaegtpcyv dsegivrmln rglgntwtpv
      661 cntrehckgk sdhywvvgih enpqqlrcip ckgsrfpptl prpavavlsf klpycqtate
      721 kgqmeeqywr svifhnhldy lakngyeyee stknqatkeq qellmkmlal scklerefrc
      781 velaglmtqn avnlaikyas rsrrlilaqr lsdlavekaa elaatqaeee eeeeedfrkk
      841 lnagysntst ewsqprlrnq veedtednge addteerpki hkhgenpffk stdssdmpai
      901 ksgavtsssq grinpfkvsg nfkepaisvn sgrstnilds mnksskksta lnratdneks
      961 pvikplipkp kskqasaasf fqkrtsqadr teevkeenpk nsssetpavc pqntenqrpk
     1021 tgfqmwleen rsnilsdnpd fsdeadiike gmvrfkvlsa eerkawaaka kggtasdgae
     1081 ekkrkrvvde sqetenqeek mknlnlpkkq kpldlsanqk lsafafkqe
//
LOCUS       XP_061012992             249 aa            linear   MAM 02-DEC-2023
DEFINITION  GTP cyclohydrolase 1 isoform X1 [Dama dama].
ACCESSION   XP_061012992
VERSION     XP_061012992.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157009.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..249
                     /product="GTP cyclohydrolase 1 isoform X1"
                     /calculated_mol_wt=27638
     Region          65..249
                     /region_name="GTP_cyclohydro1"
                     /note="GTP cyclohydrolase I (GTP-CH-I) catalyzes the
                     conversion of GTP into dihydroneopterin triphosphate. The
                     enzyme product is the precursor of tetrahydrofolate in
                     eubacteria, fungi, and plants and of the folate analogs in
                     methanogenic bacteria. In...; cd00642"
                     /db_xref="CDD:238349"
     Site            order(65..66,69..70,73,77,80..81,83,85,87,89..91,93..94,
                     96,100,103,108,119,121,125..128,130..133,135,137,141..142,
                     145..146,148,150,157..158,160,164..166,169,179..181,183,
                     186,196,209..211,214..215,220..221,223..225,227..229,
                     234..235,238,240..242)
                     /site_type="other"
                     /note="homodecamer interface [polypeptide binding]"
                     /db_xref="CDD:238349"
     Site            order(96,99,140,142..143,162,164..165,169,180..182,209,
                     211,215)
                     /site_type="active"
                     /db_xref="CDD:238349"
     Site            order(140,142..143,209,211)
                     /site_type="active"
                     /note="putative catalytic site residues [active]"
                     /db_xref="CDD:238349"
     Site            order(140,142..143,211)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:238349"
     Site            order(190,193,199,201,230..232,234..238)
                     /site_type="active"
                     /note="GTP-CH-I/GFRP interaction surface [active]"
                     /db_xref="CDD:238349"
     CDS             1..249
                     /gene="GCH1"
                     /coded_by="XM_061157009.1:161..910"
                     /db_xref="GeneID:133066197"
ORIGIN      
        1 mekgpgrvtl ksrgarcsng flegepprpg psppaekppr pesksaqpad gwkgerprse
       61 ednelnlpnl aaayssilrs lgedperqgl iktpwraata mqfftkgyqe tisdvlndai
      121 fdedhdemvi vkdidmfsmc ehhlvpfvgk vhigylpnkq vlglsklari veiysrrlqv
      181 qerltkqiav aitealrpag vgvvveathm cmvmrgvqkm nsrtvtstml gvfredpktr
      241 eefltliks
//
LOCUS       XP_061012993             272 aa            linear   MAM 02-DEC-2023
DEFINITION  GTP cyclohydrolase 1 isoform X2 [Dama dama].
ACCESSION   XP_061012993
VERSION     XP_061012993.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157010.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..272
                     /product="GTP cyclohydrolase 1 isoform X2"
                     /calculated_mol_wt=29748
     Region          65..217
                     /region_name="GTP_cyclohydro1"
                     /note="GTP cyclohydrolase I (GTP-CH-I) catalyzes the
                     conversion of GTP into dihydroneopterin triphosphate. The
                     enzyme product is the precursor of tetrahydrofolate in
                     eubacteria, fungi, and plants and of the folate analogs in
                     methanogenic bacteria. In...; cd00642"
                     /db_xref="CDD:238349"
     Site            order(65..66,69..70,73,77,80..81,83,85,87,89..91,93..94,
                     96,100,103,108,119,121,125..128,130..133,135,137,141..142,
                     145..146,148,150,157..158,160,164..166,169,179..181,183,
                     186,196,209..211,214..215)
                     /site_type="other"
                     /note="homodecamer interface [polypeptide binding]"
                     /db_xref="CDD:238349"
     Site            order(96,99,140,142..143,162,164..165,169,180..182,209,
                     211,215)
                     /site_type="active"
                     /db_xref="CDD:238349"
     Site            order(140,142..143,209,211)
                     /site_type="active"
                     /note="putative catalytic site residues [active]"
                     /db_xref="CDD:238349"
     Site            order(140,142..143,211)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:238349"
     CDS             1..272
                     /gene="GCH1"
                     /coded_by="XM_061157010.1:161..979"
                     /db_xref="GeneID:133066197"
ORIGIN      
        1 mekgpgrvtl ksrgarcsng flegepprpg psppaekppr pesksaqpad gwkgerprse
       61 ednelnlpnl aaayssilrs lgedperqgl iktpwraata mqfftkgyqe tisdvlndai
      121 fdedhdemvi vkdidmfsmc ehhlvpfvgk vhigylpnkq vlglsklari veiysrrlqv
      181 qerltkqiav aitealrpag vgvvveatqi kvinkgvspv fsschllvat fkktansvsc
      241 npmdysppgs svpgilqari lewvaipfsr iv
//
LOCUS       XP_061012994             718 aa            linear   MAM 02-DEC-2023
DEFINITION  protein Smaug homolog 1 isoform X1 [Dama dama].
ACCESSION   XP_061012994
VERSION     XP_061012994.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157011.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..718
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..718
                     /product="protein Smaug homolog 1 isoform X1"
                     /calculated_mol_wt=79164
     Region          320..382
                     /region_name="SAM_Smaug"
                     /note="SAM domain of Smaug subfamily; cd09557"
                     /db_xref="CDD:188956"
     Site            order(336,338..339,367,370..372,379,381)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:188956"
     CDS             1..718
                     /gene="SAMD4A"
                     /coded_by="XM_061157011.1:565..2721"
                     /db_xref="GeneID:133066198"
ORIGIN      
        1 mmfrdqvgvl agwfkgwnec eqtvallsll krvsqtqarf lqlclehsla dcaelhvleg
       61 eanspgiinq wqqeskdkvi slllthlpll kpgnldakve ymkllpkila hsiehnqhie
      121 esrqllsyal ihpatsledr salamwlnhl edrtstsfgg qnrgrsdsvd ygqthyyhqr
      181 qnsddklngw qnsrdsgici nasnwqdksl gcenghvply ssssvpttin tigtststil
      241 sgqahhsplk rsvsltppmn vpnqplghgw mshedlrarg pqclpsdhap lspqssvass
      301 gsggsehled qttarntfqe egsgmkdvpa wlkslrlhky aalfsqmtye emmaltecql
      361 eaqnvtkgar hkivisiqkl kerqnllksl erdiieggnl rlplqelhqm iltpikayss
      421 psttpearrr epqaphppsl mgpesqspdc kdsataagas atasagasgg lqphqlsscd
      481 gelavtplpe gdlpgqftrv mgkvctqllv srpdeeniss ylqlidkcli heaftetqkk
      541 rllswkqqvq klfrsfprkt lldisgyrqq rnrgfgqsns lptassvggg mgrrnprqyq
      601 ipsrnvpsar lgllgtsgfv sstqrntaan ptimkqgrqn lwfanpggsn smpsrthssv
      661 qrtrslpvht spqnmlmfqq pefqlpvtep dinnrleslc lsmtehalgd gvdrtsti
//
LOCUS       XP_061012996             718 aa            linear   MAM 02-DEC-2023
DEFINITION  protein Smaug homolog 1 isoform X1 [Dama dama].
ACCESSION   XP_061012996
VERSION     XP_061012996.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157013.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..718
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..718
                     /product="protein Smaug homolog 1 isoform X1"
                     /calculated_mol_wt=79164
     Region          320..382
                     /region_name="SAM_Smaug"
                     /note="SAM domain of Smaug subfamily; cd09557"
                     /db_xref="CDD:188956"
     Site            order(336,338..339,367,370..372,379,381)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:188956"
     CDS             1..718
                     /gene="SAMD4A"
                     /coded_by="XM_061157013.1:618..2774"
                     /db_xref="GeneID:133066198"
ORIGIN      
        1 mmfrdqvgvl agwfkgwnec eqtvallsll krvsqtqarf lqlclehsla dcaelhvleg
       61 eanspgiinq wqqeskdkvi slllthlpll kpgnldakve ymkllpkila hsiehnqhie
      121 esrqllsyal ihpatsledr salamwlnhl edrtstsfgg qnrgrsdsvd ygqthyyhqr
      181 qnsddklngw qnsrdsgici nasnwqdksl gcenghvply ssssvpttin tigtststil
      241 sgqahhsplk rsvsltppmn vpnqplghgw mshedlrarg pqclpsdhap lspqssvass
      301 gsggsehled qttarntfqe egsgmkdvpa wlkslrlhky aalfsqmtye emmaltecql
      361 eaqnvtkgar hkivisiqkl kerqnllksl erdiieggnl rlplqelhqm iltpikayss
      421 psttpearrr epqaphppsl mgpesqspdc kdsataagas atasagasgg lqphqlsscd
      481 gelavtplpe gdlpgqftrv mgkvctqllv srpdeeniss ylqlidkcli heaftetqkk
      541 rllswkqqvq klfrsfprkt lldisgyrqq rnrgfgqsns lptassvggg mgrrnprqyq
      601 ipsrnvpsar lgllgtsgfv sstqrntaan ptimkqgrqn lwfanpggsn smpsrthssv
      661 qrtrslpvht spqnmlmfqq pefqlpvtep dinnrleslc lsmtehalgd gvdrtsti
//
LOCUS       XP_061012997             630 aa            linear   MAM 02-DEC-2023
DEFINITION  protein Smaug homolog 1 isoform X2 [Dama dama].
ACCESSION   XP_061012997
VERSION     XP_061012997.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157014.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..630
                     /product="protein Smaug homolog 1 isoform X2"
                     /calculated_mol_wt=69844
     Region          238..294
                     /region_name="SAM_Smaug"
                     /note="SAM domain of Smaug subfamily; cd09557"
                     /db_xref="CDD:188956"
     Site            order(248,250..251,279,282..284,291,293)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:188956"
     CDS             1..630
                     /gene="SAMD4A"
                     /coded_by="XM_061157014.1:565..2457"
                     /db_xref="GeneID:133066198"
ORIGIN      
        1 mmfrdqvgvl agwfkgwnec eqtvallsll krvsqtqarf lqlclehsla dcaelhvleg
       61 eanspgiinq wqqeskdkvi slllthlpll kpgnldakve ymkllpkila hsiehnqhie
      121 esrqllsyal ihpatsledr salamwlnhl edrtstsfgg qnrgrsdsvd ygqthyyhqr
      181 qnsddklngw qnsrdsgici nasnwqdksl gcenghvply ssssvpttin tigtststnv
      241 pawlkslrlh kyaalfsqmt yeemmaltec qleaqnvtkg arhkivisiq klkerqnllk
      301 slerdiiegg nlrlplqelh qmiltpikay sspsttpear rrepqaphpp slmgpesqsp
      361 dckdsataag asatasagas gglqphqlss cdgelavtpl pegdlpgqft rvmgkvctql
      421 lvsrpdeeni ssylqlidkc liheaftetq kkrllswkqq vqklfrsfpr ktlldisgyr
      481 qqrnrgfgqs nslptassvg ggmgrrnprq yqipsrnvps arlgllgtsg fvsstqrnta
      541 anptimkqgr qnlwfanpgg snsmpsrths svqrtrslpv htspqnmlmf qqpefqlpvt
      601 epdinnrles lclsmtehal gdgvdrtsti
//
LOCUS       XP_061012998             332 aa            linear   MAM 02-DEC-2023
DEFINITION  cell growth regulator with RING finger domain protein 1 [Dama
            dama].
ACCESSION   XP_061012998
VERSION     XP_061012998.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157015.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..332
                     /product="cell growth regulator with RING finger domain
                     protein 1"
                     /calculated_mol_wt=38094
     Region          272..309
                     /region_name="mRING-HC-C3HC5_CGRF1"
                     /note="Modified RING finger, HC subclass (C3HC5-type),
                     found in cell growth regulator with RING finger domain
                     protein 1 (CGRRF1) and similar proteins; cd16787"
                     /db_xref="CDD:438441"
     CDS             1..332
                     /gene="CGRRF1"
                     /coded_by="XM_061157015.1:124..1122"
                     /db_xref="GeneID:133066199"
ORIGIN      
        1 maavflvtly eysplfyiav vftcfivttg lvlgwfgwdv pvilrnseet qfntrvfkkq
       61 mrqvknpfgl eitnpssasi ttgitlttdc ledslltcyw gcsvqkfyea lqkhfycfri
      121 stpqaledal yseylyqeqy fikkdskeei ycqlprdtki edfgtvprsr yplvalltla
      181 dkddreiydi ismvsvihip dktyklscri lyqylllaqg qfhdlkqlfm sannnstpss
      241 nsspeekntd rsllekagls eseveppeen skdcvvcqng pvnwvllpcr htclcdgcvk
      301 yfqqcpmcrq fvqesfalcs qkeqdkdklk sl
//
LOCUS       XP_061012999             144 aa            linear   MAM 02-DEC-2023
DEFINITION  glia maturation factor beta isoform X1 [Dama dama].
ACCESSION   XP_061012999
VERSION     XP_061012999.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157016.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..144
                     /product="glia maturation factor beta isoform X1"
                     /calculated_mol_wt=16782
     Region          9..132
                     /region_name="ADF_GMF-beta_like"
                     /note="ADF-homology domain of glia maturation factor beta
                     and related proteins; cd11283"
                     /db_xref="CDD:200439"
     CDS             1..144
                     /gene="GMFB"
                     /coded_by="XM_061157016.1:116..550"
                     /db_xref="GeneID:133066200"
ORIGIN      
        1 mseslvvcdv aedlveklrk frfrketnna aiimkidkdk rlvvldeele gispdelkde
       61 lperqprtfi vysykyqhdd grvsyplcfi fsspvgckpe qqmmyagskn klvqtaeltk
      121 vvfeirnted lteewlrekl gffh
//
LOCUS       XP_061013000             143 aa            linear   MAM 02-DEC-2023
DEFINITION  glia maturation factor beta isoform X2 [Dama dama].
ACCESSION   XP_061013000
VERSION     XP_061013000.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157017.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..143
                     /product="glia maturation factor beta isoform X2"
                     /calculated_mol_wt=16683
     Region          9..131
                     /region_name="ADF_GMF-beta_like"
                     /note="ADF-homology domain of glia maturation factor beta
                     and related proteins; cd11283"
                     /db_xref="CDD:200439"
     CDS             1..143
                     /gene="GMFB"
                     /coded_by="XM_061157017.1:116..547"
                     /db_xref="GeneID:133066200"
ORIGIN      
        1 mseslvvcdv aedlveklrk frfrketnna aiimkidkdk rlvvldeele gispdelkde
       61 lperqprtfi vysykyqhdd grvsyplcfi fsspvgckpe qqmmyagskn klvqtaeltk
      121 vfeirntedl teewlreklg ffh
//
LOCUS       XP_061013001             142 aa            linear   MAM 02-DEC-2023
DEFINITION  glia maturation factor beta isoform X3 [Dama dama].
ACCESSION   XP_061013001
VERSION     XP_061013001.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157018.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..142
                     /product="glia maturation factor beta isoform X3"
                     /calculated_mol_wt=16582
     Region          9..130
                     /region_name="ADF_GMF-beta_like"
                     /note="ADF-homology domain of glia maturation factor beta
                     and related proteins; cd11283"
                     /db_xref="CDD:200439"
     CDS             1..142
                     /gene="GMFB"
                     /coded_by="XM_061157018.1:116..544"
                     /db_xref="GeneID:133066200"
ORIGIN      
        1 mseslvvcdv aedlveklrk frfrketnna aiimkidkdk rlvvldeele gispdelkde
       61 lperqprfiv ysykyqhddg rvsyplcfif sspvgckpeq qmmyagsknk lvqtaeltkv
      121 feirntedlt eewlreklgf fh
//
LOCUS       XP_061013002             212 aa            linear   MAM 02-DEC-2023
DEFINITION  cyclin-dependent kinase inhibitor 3 isoform X1 [Dama dama].
ACCESSION   XP_061013002
VERSION     XP_061013002.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157019.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..212
                     /product="cyclin-dependent kinase inhibitor 3 isoform X1"
                     /calculated_mol_wt=23853
     Region          1..168
                     /region_name="CDKN3"
                     /note="Cyclin-dependent kinase inhibitor 3 (CDKN3);
                     pfam05706"
                     /db_xref="CDD:399018"
     CDS             1..212
                     /gene="CDKN3"
                     /coded_by="XM_061157019.1:95..733"
                     /db_xref="GeneID:133066201"
ORIGIN      
        1 mkppssmqts efdssdeepi edeqtpiqis wlplsrvncs qflglcalpg ckfkdvrrni
       61 qkdteelksy giqdifvfct rgelskyrvp nlldlyhqyg iithhhpipd ggtpditscc
      121 eimeeleicl knnrktlihc ygglgrsclv aaclllylsd tvspqqaids lrdlrgsgai
      181 qtikqynylh efrdklaahl ssrdslsrsv sr
//
LOCUS       XP_061013003             211 aa            linear   MAM 02-DEC-2023
DEFINITION  cyclin-dependent kinase inhibitor 3 isoform X2 [Dama dama].
ACCESSION   XP_061013003
VERSION     XP_061013003.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157020.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..211
                     /product="cyclin-dependent kinase inhibitor 3 isoform X2"
                     /calculated_mol_wt=23754
     Region          1..167
                     /region_name="PTP_DSP_cys"
                     /note="cys-based protein tyrosine phosphatase and
                     dual-specificity phosphatase superfamily; cl28904"
                     /db_xref="CDD:475123"
     CDS             1..211
                     /gene="CDKN3"
                     /coded_by="XM_061157020.1:55..690"
                     /db_xref="GeneID:133066201"
ORIGIN      
        1 mkppssmqts efdssdeepi edeqtpiqis wlplsrvncs qflglcalpg ckfkdvrrni
       61 qkdteelksy giqdifvfct rgelskyrvp nlldlyhqyg iithhhpipd ggtpditscc
      121 eimeeleicl knnrktlihc ygglgrscla aclllylsdt vspqqaidsl rdlrgsgaiq
      181 tikqynylhe frdklaahls srdslsrsvs r
//
LOCUS       XP_061013004             206 aa            linear   MAM 02-DEC-2023
DEFINITION  cyclin-dependent kinase inhibitor 3 isoform X3 [Dama dama].
ACCESSION   XP_061013004
VERSION     XP_061013004.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157021.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..206
                     /product="cyclin-dependent kinase inhibitor 3 isoform X3"
                     /calculated_mol_wt=23226
     Region          1..162
                     /region_name="CDKN3"
                     /note="Cyclin-dependent kinase inhibitor 3 (CDKN3);
                     pfam05706"
                     /db_xref="CDD:399018"
     CDS             1..206
                     /gene="CDKN3"
                     /coded_by="XM_061157021.1:181..801"
                     /db_xref="GeneID:133066201"
ORIGIN      
        1 mqtsefdssd eepiedeqtp iqiswlplsr vncsqflglc alpgckfkdv rrniqkdtee
       61 lksygiqdif vfctrgelsk yrvpnlldly hqygiithhh pipdggtpdi tscceimeel
      121 eiclknnrkt lihcygglgr sclvaaclll ylsdtvspqq aidslrdlrg sgaiqtikqy
      181 nylhefrdkl aahlssrdsl srsvsr
//
LOCUS       XP_061013005             206 aa            linear   MAM 02-DEC-2023
DEFINITION  cyclin-dependent kinase inhibitor 3 isoform X3 [Dama dama].
ACCESSION   XP_061013005
VERSION     XP_061013005.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157022.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..206
                     /product="cyclin-dependent kinase inhibitor 3 isoform X3"
                     /calculated_mol_wt=23226
     Region          1..162
                     /region_name="CDKN3"
                     /note="Cyclin-dependent kinase inhibitor 3 (CDKN3);
                     pfam05706"
                     /db_xref="CDD:399018"
     CDS             1..206
                     /gene="CDKN3"
                     /coded_by="XM_061157022.1:80..700"
                     /db_xref="GeneID:133066201"
ORIGIN      
        1 mqtsefdssd eepiedeqtp iqiswlplsr vncsqflglc alpgckfkdv rrniqkdtee
       61 lksygiqdif vfctrgelsk yrvpnlldly hqygiithhh pipdggtpdi tscceimeel
      121 eiclknnrkt lihcygglgr sclvaaclll ylsdtvspqq aidslrdlrg sgaiqtikqy
      181 nylhefrdkl aahlssrdsl srsvsr
//
LOCUS       XP_061013006             192 aa            linear   MAM 02-DEC-2023
DEFINITION  cyclin-dependent kinase inhibitor 3 isoform X4 [Dama dama].
ACCESSION   XP_061013006
VERSION     XP_061013006.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157023.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..192
                     /product="cyclin-dependent kinase inhibitor 3 isoform X4"
                     /calculated_mol_wt=21421
     Region          1..168
                     /region_name="CDKN3"
                     /note="Cyclin-dependent kinase inhibitor 3 (CDKN3);
                     pfam05706"
                     /db_xref="CDD:399018"
     CDS             1..192
                     /gene="CDKN3"
                     /coded_by="XM_061157023.1:55..633"
                     /db_xref="GeneID:133066201"
ORIGIN      
        1 mkppssmqts efdssdeepi edeqtpiqis wlplsrvncs qflglcalpg ckfkdvrrni
       61 qkdteelksy giqdifvfct rgelskyrvp nlldlyhqyg iithhhpipd ggtpditscc
      121 eimeeleicl knnrktlihc ygglgrsclv aaclllylsd tvspqqaids lrdlrgsgai
      181 qtikcpkdit dl
//
LOCUS       XP_061013007             167 aa            linear   MAM 02-DEC-2023
DEFINITION  cyclin-dependent kinase inhibitor 3 isoform X5 [Dama dama].
ACCESSION   XP_061013007
VERSION     XP_061013007.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157024.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..167
                     /product="cyclin-dependent kinase inhibitor 3 isoform X5"
                     /calculated_mol_wt=18529
     Region          1..123
                     /region_name="PTP_DSP_cys"
                     /note="cys-based protein tyrosine phosphatase and
                     dual-specificity phosphatase superfamily; cl28904"
                     /db_xref="CDD:475123"
     CDS             1..167
                     /gene="CDKN3"
                     /coded_by="XM_061157024.1:55..558"
                     /db_xref="GeneID:133066201"
ORIGIN      
        1 mkppssmqts efdssdeepi edeqtpiqis wlplsrvncs qflglcalpg ckfkdvrrni
       61 qkdtdggtpd itscceimee leiclknnrk tlihcygglg rsclvaacll lylsdtvspq
      121 qaidslrdlr gsgaiqtikq ynylhefrdk laahlssrds lsrsvsr
//
LOCUS       XP_061013008             144 aa            linear   MAM 02-DEC-2023
DEFINITION  protein cornichon homolog 1 [Dama dama].
ACCESSION   XP_061013008
VERSION     XP_061013008.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157025.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..144
                     /product="protein cornichon homolog 1"
                     /calculated_mol_wt=16568
     Region          7..135
                     /region_name="Cornichon"
                     /note="Cornichon protein; pfam03311"
                     /db_xref="CDD:460883"
     CDS             1..144
                     /gene="CNIH1"
                     /coded_by="XM_061157025.1:79..513"
                     /db_xref="GeneID:133066203"
ORIGIN      
        1 maftfaafcy mlallltaal iffaiwhiia fdelktdykn pidqcntlnp lvlpeyliha
       61 ffcvmflcaa ewltlglnmp llayhiwrym srpvmsgpgl ydpttimnad ilaycqkegw
      121 cklafyllaf fyylygmiyv lvss
//
LOCUS       XP_061013009             409 aa            linear   MAM 02-DEC-2023
DEFINITION  bone morphogenetic protein 4 isoform X1 [Dama dama].
ACCESSION   XP_061013009
VERSION     XP_061013009.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157026.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..409
                     /product="bone morphogenetic protein 4 isoform X1"
                     /calculated_mol_wt=46481
     Region          43..276
                     /region_name="TGFb_propeptide"
                     /note="TGF-beta propeptide; pfam00688"
                     /db_xref="CDD:459906"
     Region          303..409
                     /region_name="TGF_beta_BMP4_BMP2B"
                     /note="transforming growth factor beta (TGF-beta) like
                     domain found in bone morphogenetic protein 4 (BMP-4) and
                     similar proteins; cd19391"
                     /db_xref="CDD:381661"
     Site            order(314,316,320..321,323,333,335..337,354..355,358..359,
                     361..362,365,368..370,373,375..376,379,399..401,403,409)
                     /site_type="other"
                     /note="putative homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381661"
     CDS             1..409
                     /gene="BMP4"
                     /coded_by="XM_061157026.1:855..2084"
                     /db_xref="GeneID:133066204"
ORIGIN      
        1 mipgnrmlmv vllcqvllgg ashaslipet gkkkvaeiqg haggrrsgqs hellrdfeat
       61 llqmfglrrr pqpsksavip dymrdlyrlq sgeeeeeeqi qgigleyper pasrantvrs
      121 fhheehleni pgtsensafr flfnlssipe nevissaelr lfreqvdqgp dweqgfhrin
      181 iyevmkppae avpghlitrl ldtrlvhhnv trwetfdvsp avlrwtrekq pnyglaievt
      241 hlhqtrthqg qhvrisrslp qgsgdwaqlr pllvtfghdg rghaltrrrr akrspkhhpq
      301 rarkknkncr rhslyvdfsd vgwndwivap pgyqafychg dcpfpladhl nstnhaivqt
      361 lvnsvnssip kaccvptels aismlyldey dkvvlknyqe mvvegcgcr
//
LOCUS       XP_061013010             409 aa            linear   MAM 02-DEC-2023
DEFINITION  bone morphogenetic protein 4 isoform X1 [Dama dama].
ACCESSION   XP_061013010
VERSION     XP_061013010.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157027.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..409
                     /product="bone morphogenetic protein 4 isoform X1"
                     /calculated_mol_wt=46481
     Region          43..276
                     /region_name="TGFb_propeptide"
                     /note="TGF-beta propeptide; pfam00688"
                     /db_xref="CDD:459906"
     Region          303..409
                     /region_name="TGF_beta_BMP4_BMP2B"
                     /note="transforming growth factor beta (TGF-beta) like
                     domain found in bone morphogenetic protein 4 (BMP-4) and
                     similar proteins; cd19391"
                     /db_xref="CDD:381661"
     Site            order(314,316,320..321,323,333,335..337,354..355,358..359,
                     361..362,365,368..370,373,375..376,379,399..401,403,409)
                     /site_type="other"
                     /note="putative homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381661"
     CDS             1..409
                     /gene="BMP4"
                     /coded_by="XM_061157027.1:433..1662"
                     /db_xref="GeneID:133066204"
ORIGIN      
        1 mipgnrmlmv vllcqvllgg ashaslipet gkkkvaeiqg haggrrsgqs hellrdfeat
       61 llqmfglrrr pqpsksavip dymrdlyrlq sgeeeeeeqi qgigleyper pasrantvrs
      121 fhheehleni pgtsensafr flfnlssipe nevissaelr lfreqvdqgp dweqgfhrin
      181 iyevmkppae avpghlitrl ldtrlvhhnv trwetfdvsp avlrwtrekq pnyglaievt
      241 hlhqtrthqg qhvrisrslp qgsgdwaqlr pllvtfghdg rghaltrrrr akrspkhhpq
      301 rarkknkncr rhslyvdfsd vgwndwivap pgyqafychg dcpfpladhl nstnhaivqt
      361 lvnsvnssip kaccvptels aismlyldey dkvvlknyqe mvvegcgcr
//
LOCUS       XP_061013011             456 aa            linear   MAM 02-DEC-2023
DEFINITION  bone morphogenetic protein 4 isoform X2 [Dama dama].
ACCESSION   XP_061013011
VERSION     XP_061013011.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157028.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..456
                     /product="bone morphogenetic protein 4 isoform X2"
                     /calculated_mol_wt=51486
     Region          90..323
                     /region_name="TGFb_propeptide"
                     /note="TGF-beta propeptide; pfam00688"
                     /db_xref="CDD:459906"
     Region          350..456
                     /region_name="TGF_beta_BMP4_BMP2B"
                     /note="transforming growth factor beta (TGF-beta) like
                     domain found in bone morphogenetic protein 4 (BMP-4) and
                     similar proteins; cd19391"
                     /db_xref="CDD:381661"
     Site            order(361,363,367..368,370,380,382..384,401..402,405..406,
                     408..409,412,415..417,420,422..423,426,446..448,450,456)
                     /site_type="other"
                     /note="putative homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381661"
     CDS             1..456
                     /gene="BMP4"
                     /coded_by="XM_061157028.1:33..1403"
                     /db_xref="GeneID:133066204"
ORIGIN      
        1 mqegrggrre gtgaelgpea rshsvvpsra thcrsssepf qqvcsrlavk nhglllyalf
       61 svillggash aslipetgkk kvaeiqghag grrsgqshel lrdfeatllq mfglrrrpqp
      121 sksavipdym rdlyrlqsge eeeeeqiqgi gleyperpas rantvrsfhh eehlenipgt
      181 sensafrflf nlssipenev issaelrlfr eqvdqgpdwe qgfhriniye vmkppaeavp
      241 ghlitrlldt rlvhhnvtrw etfdvspavl rwtrekqpny glaievthlh qtrthqgqhv
      301 risrslpqgs gdwaqlrpll vtfghdgrgh altrrrrakr spkhhpqrar kknkncrrhs
      361 lyvdfsdvgw ndwivappgy qafychgdcp fpladhlnst nhaivqtlvn svnssipkac
      421 cvptelsais mlyldeydkv vlknyqemvv egcgcr
//
LOCUS       XP_061013012             118 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin-conjugating enzyme E2 D3-like [Dama dama].
ACCESSION   XP_061013012
VERSION     XP_061013012.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157029.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..118
                     /product="ubiquitin-conjugating enzyme E2 D3-like"
                     /calculated_mol_wt=13513
     Region          1..116
                     /region_name="UBCc_UEV"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain/ubiquitin E2 variant (UEV) domain; cl49610"
                     /db_xref="CDD:483950"
     CDS             1..118
                     /gene="LOC133066205"
                     /coded_by="XM_061157029.1:339..695"
                     /db_xref="GeneID:133066205"
ORIGIN      
        1 mfhwqatimg pndspyqggv ffftihfptd ypfkppkvaf ttriyhpnin sngsicldil
       61 rsqwspalti skvllsicsl lcdpnpddpl vpeiariykt drdkysrisr ewtqkyam
//
LOCUS       XP_061013013             938 aa            linear   MAM 02-DEC-2023
DEFINITION  phospholipase DDHD1 isoform X1 [Dama dama].
ACCESSION   XP_061013013
VERSION     XP_061013013.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157030.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..938
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..938
                     /product="phospholipase DDHD1 isoform X1"
                     /calculated_mol_wt=104853
     Region          649..923
                     /region_name="DDHD"
                     /note="DDHD domain; pfam02862"
                     /db_xref="CDD:460725"
     CDS             1..938
                     /gene="DDHD1"
                     /coded_by="XM_061157030.1:202..3018"
                     /db_xref="GeneID:133066206"
ORIGIN      
        1 mnypghgspr ssernggrgg dgaawelgsd aepafggsvc rfdhlpagdp gddevplall
       61 rgepglhlap gaedhnhhla ldpclsddny dfssaesgss lryysegesg gggsssslhp
      121 pqqpplvasn sggggaaggg pgerkrtrpg gaaarhryev vtelgpeevr wfykedkktw
      181 kpfigydslr ielafrtllq atgtraraqd pdgdhvcgpa spagpasssk edededrvcg
      241 fcpriaghgr emeelvnier vcvrgglyev dvtqgecypv ywnqsdkipv mrgqwfidgt
      301 wqpleeeesn lieqehlsrf rgqqmqesfd ievskpidgk dvvyhlppfs lpslfkwrgy
      361 kestdaaglk rkrsqaihsf klsrnhvdwh svdevylysd attskiartv tqklgfskas
      421 ssgtrlhrgy veeatledkp sqtthivfvv hgigqkmdqg riikntammr eaarkieerh
      481 fsnhathvef lpvewrsklt ldgdtvdsit pdkvrglrdm lnssamdimy ytsplyrdel
      541 vkglqqelnr lyslfcsrnp nfeekggkvs ivshslgcvi tydimtgwnp vrlyeqllqk
      601 eeelpderwm syeerhllde lyitkrrlre ieerlrglka ssmtqtpalk fkvenffcmg
      661 splavflalr girpgntgtq dhilpreicn rllnifhptd pvayrlepli lkhysnispv
      721 qihwyntsnp lpyeymkpsf lhpakdptsv senegistip spvtspvlsr rhygesitni
      781 gkasilgaas igkglggmlf srfgrssasq psetsrdsie dekkpvaspp mttvatqtlp
      841 hsssgfldsa yfrlqesffn lpqllfpenv tqnkdntlve ldhridfelr eglvesryws
      901 avtshtayws sldvalfllt fmykhehdnn vkpsldpv
//
LOCUS       XP_061013014             910 aa            linear   MAM 02-DEC-2023
DEFINITION  phospholipase DDHD1 isoform X2 [Dama dama].
ACCESSION   XP_061013014
VERSION     XP_061013014.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157031.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..910
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..910
                     /product="phospholipase DDHD1 isoform X2"
                     /calculated_mol_wt=101468
     Region          649..895
                     /region_name="DDHD"
                     /note="DDHD domain; pfam02862"
                     /db_xref="CDD:460725"
     CDS             1..910
                     /gene="DDHD1"
                     /coded_by="XM_061157031.1:201..2933"
                     /db_xref="GeneID:133066206"
ORIGIN      
        1 mnypghgspr ssernggrgg dgaawelgsd aepafggsvc rfdhlpagdp gddevplall
       61 rgepglhlap gaedhnhhla ldpclsddny dfssaesgss lryysegesg gggsssslhp
      121 pqqpplvasn sggggaaggg pgerkrtrpg gaaarhryev vtelgpeevr wfykedkktw
      181 kpfigydslr ielafrtllq atgtraraqd pdgdhvcgpa spagpasssk edededrvcg
      241 fcpriaghgr emeelvnier vcvrgglyev dvtqgecypv ywnqsdkipv mrgqwfidgt
      301 wqpleeeesn lieqehlsrf rgqqmqesfd ievskpidgk dvvyhlppfs lpslfkwrgy
      361 kestdaaglk rkrsqaihsf klsrnhvdwh svdevylysd attskiartv tqklgfskas
      421 ssgtrlhrgy veeatledkp sqtthivfvv hgigqkmdqg riikntammr eaarkieerh
      481 fsnhathvef lpvewrsklt ldgdtvdsit pdkvrglrdm lnssamdimy ytsplyrdel
      541 vkglqqelnr lyslfcsrnp nfeekggkvs ivshslgcvi tydimtgwnp vrlyeqllqk
      601 eeelpderwm syeerhllde lyitkrrlre ieerlrglka ssmtqtpalk fkvenffcmg
      661 splavflalr girpgntgtq dhilpreicn rllnifhptd pvayrlepli lkhysnispv
      721 qihwyntsnp lpyeymkpsf lhpakdptsv senegistip spvtspvlsr rhygesitni
      781 gkasilgaas igkglggmlf srfgrssasq psetsrdsie dekkpvaspp mttvatqtlp
      841 hsssgfldsa leldhridfe lreglvesry wsavtshtay wssldvalfl ltfmykhehd
      901 nnvkpsldpv
//
LOCUS       XP_061013015             904 aa            linear   MAM 02-DEC-2023
DEFINITION  phospholipase DDHD1 isoform X3 [Dama dama].
ACCESSION   XP_061013015
VERSION     XP_061013015.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157032.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..904
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..904
                     /product="phospholipase DDHD1 isoform X3"
                     /calculated_mol_wt=100907
     Region          615..889
                     /region_name="DDHD"
                     /note="DDHD domain; pfam02862"
                     /db_xref="CDD:460725"
     CDS             1..904
                     /gene="DDHD1"
                     /coded_by="XM_061157032.1:200..2914"
                     /db_xref="GeneID:133066206"
ORIGIN      
        1 mnypghgspr ssernggrgg dgaawelgsd aepafggsvc rfdhlpagdp gddevplall
       61 rgepglhlap gaedhnhhla ldpclsddny dfssaesgss lryysegesg gggsssslhp
      121 pqqpplvasn sggggaaggg pgerkrtrpg gaaarhryev vtelgpeevr wfykedkktw
      181 kpfigydslr ielafrtllq atgtraraqd pdgdhvcgpa spagpasssk edededrvcg
      241 fcpriaghgr emeelvnier vcvrgglyev dvtqgecypv ywnqsdkipv mrgqwfidgt
      301 wqpleeeesn lieqehlsrf rgqqmqesfd ievskpidgk daihsfklsr nhvdwhsvde
      361 vylysdatts kiartvtqkl gfskasssgt rlhrgyveea tledkpsqtt hivfvvhgig
      421 qkmdqgriik ntammreaar kieerhfsnh athveflpve wrskltldgd tvdsitpdkv
      481 rglrdmlnss amdimyytsp lyrdelvkgl qqelnrlysl fcsrnpnfee kggkvsivsh
      541 slgcvitydi mtgwnpvrly eqllqkeeel pderwmsyee rhlldelyit krrlreieer
      601 lrglkassmt qtpalkfkve nffcmgspla vflalrgirp gntgtqdhil preicnrlln
      661 ifhptdpvay rleplilkhy snispvqihw yntsnplpye ymkpsflhpa kdptsvsene
      721 gistipspvt spvlsrrhyg esitnigkas ilgaasigkg lggmlfsrfg rssasqpset
      781 srdsiedekk pvasppmttv atqtlphsss gfldsayfrl qesffnlpql lfpenvtqnk
      841 dntlveldhr idfelreglv esrywsavts htaywssldv alflltfmyk hehdnnvkps
      901 ldpv
//
LOCUS       XP_061013016             876 aa            linear   MAM 02-DEC-2023
DEFINITION  phospholipase DDHD1 isoform X4 [Dama dama].
ACCESSION   XP_061013016
VERSION     XP_061013016.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157033.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..876
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..876
                     /product="phospholipase DDHD1 isoform X4"
                     /calculated_mol_wt=97523
     Region          615..861
                     /region_name="DDHD"
                     /note="DDHD domain; pfam02862"
                     /db_xref="CDD:460725"
     CDS             1..876
                     /gene="DDHD1"
                     /coded_by="XM_061157033.1:199..2829"
                     /db_xref="GeneID:133066206"
ORIGIN      
        1 mnypghgspr ssernggrgg dgaawelgsd aepafggsvc rfdhlpagdp gddevplall
       61 rgepglhlap gaedhnhhla ldpclsddny dfssaesgss lryysegesg gggsssslhp
      121 pqqpplvasn sggggaaggg pgerkrtrpg gaaarhryev vtelgpeevr wfykedkktw
      181 kpfigydslr ielafrtllq atgtraraqd pdgdhvcgpa spagpasssk edededrvcg
      241 fcpriaghgr emeelvnier vcvrgglyev dvtqgecypv ywnqsdkipv mrgqwfidgt
      301 wqpleeeesn lieqehlsrf rgqqmqesfd ievskpidgk daihsfklsr nhvdwhsvde
      361 vylysdatts kiartvtqkl gfskasssgt rlhrgyveea tledkpsqtt hivfvvhgig
      421 qkmdqgriik ntammreaar kieerhfsnh athveflpve wrskltldgd tvdsitpdkv
      481 rglrdmlnss amdimyytsp lyrdelvkgl qqelnrlysl fcsrnpnfee kggkvsivsh
      541 slgcvitydi mtgwnpvrly eqllqkeeel pderwmsyee rhlldelyit krrlreieer
      601 lrglkassmt qtpalkfkve nffcmgspla vflalrgirp gntgtqdhil preicnrlln
      661 ifhptdpvay rleplilkhy snispvqihw yntsnplpye ymkpsflhpa kdptsvsene
      721 gistipspvt spvlsrrhyg esitnigkas ilgaasigkg lggmlfsrfg rssasqpset
      781 srdsiedekk pvasppmttv atqtlphsss gfldsaleld hridfelreg lvesrywsav
      841 tshtaywssl dvalflltfm ykhehdnnvk psldpv
//
LOCUS       XP_061013017             680 aa            linear   MAM 02-DEC-2023
DEFINITION  fermitin family homolog 2 [Dama dama].
ACCESSION   XP_061013017
VERSION     XP_061013017.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157034.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..680
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..680
                     /product="fermitin family homolog 2"
                     /calculated_mol_wt=77743
     Region          17..96
                     /region_name="FERM_F0_KIND2"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain, F0 sub-domain, found in kindlin-2 (KIND2);
                     cd17181"
                     /db_xref="CDD:340701"
     Region          97..277
                     /region_name="FERM_F1_KIND2"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain, F1 sub-domain, found in kindlin-2 (KIND2);
                     cd17184"
                     /db_xref="CDD:340704"
     Region          <241..>324
                     /region_name="B41"
                     /note="Band 4.1 homologues; smart00295"
                     /db_xref="CDD:214604"
     Region          373..497
                     /region_name="PH_fermitin"
                     /note="Fermitin family pleckstrin homology (PH) domain;
                     cd01237"
                     /db_xref="CDD:269943"
     Site            order(381,383,385,389..391,393,406,408,419)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:269943"
     Region          <455..573
                     /region_name="FERM_M"
                     /note="FERM central domain; pfam00373"
                     /db_xref="CDD:459788"
     Region          567..658
                     /region_name="FERM_C_fermitin"
                     /note="FERM domain C-lobe of the Fermitin family; cd13205"
                     /db_xref="CDD:270026"
     Site            order(577,595,597,605)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270026"
     Site            order(609,614..617,647,651,654..655)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270026"
     Site            647..658
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:270026"
     CDS             1..680
                     /gene="FERMT2"
                     /coded_by="XM_061157034.1:164..2206"
                     /db_xref="GeneID:133066208"
ORIGIN      
        1 maldgirmpd gcyadgtwel svhvtdlnrd vtlrvtgevh iggvmlklve kldvkkdwsd
       61 halwwekkrt wllkthwtld kygiqadakl qftpqhkllr lqlpnmkyvk vkvnfsdrvf
      121 kavsdicktf nirhpeelsl lkkprdptkk kkkklddqse dealelegpl itpgsgsiys
      181 spglysktmt ptydahdgsp lsptsawfgd salsegnpgi lavsqpitsp eilakmfkpq
      241 alldkakinq gwldssrslm eqdvkeneal llrfkyysff dlnpkydair inqlyeqakw
      301 ailleeiect eeemmmfaal qyhinklsim tsenhlnnsd kevdevdaal sdleitlegg
      361 ktstilgdit sipeladyik vfkpkkltlk gykqywctfk dtsiscyksk eessgtpahq
      421 mnlrgcevtp dvnisgqkfn ikllipvaeg mneiwlrcdn ekqyahwmaa crlaskgktm
      481 adssynlevq nilsflkmqh lnpdpqlipe qittdinpec lvsprylkky knkqitaril
      541 eahqnvaqms lieakmrfiq awqslpefgi thfiarfqgg kkeeligiay nrlirmdast
      601 gdaiktwrfs nmkqwnvnwe ikmvtvefad evrlsficte vdckvvhefi ggyiflstra
      661 kdqnesldee mfykltsgwv
//
LOCUS       XP_061013018             680 aa            linear   MAM 02-DEC-2023
DEFINITION  fermitin family homolog 2 [Dama dama].
ACCESSION   XP_061013018
VERSION     XP_061013018.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157035.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..680
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..680
                     /product="fermitin family homolog 2"
                     /calculated_mol_wt=77743
     Region          17..96
                     /region_name="FERM_F0_KIND2"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain, F0 sub-domain, found in kindlin-2 (KIND2);
                     cd17181"
                     /db_xref="CDD:340701"
     Region          97..277
                     /region_name="FERM_F1_KIND2"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain, F1 sub-domain, found in kindlin-2 (KIND2);
                     cd17184"
                     /db_xref="CDD:340704"
     Region          <241..>324
                     /region_name="B41"
                     /note="Band 4.1 homologues; smart00295"
                     /db_xref="CDD:214604"
     Region          373..497
                     /region_name="PH_fermitin"
                     /note="Fermitin family pleckstrin homology (PH) domain;
                     cd01237"
                     /db_xref="CDD:269943"
     Site            order(381,383,385,389..391,393,406,408,419)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:269943"
     Region          <455..573
                     /region_name="FERM_M"
                     /note="FERM central domain; pfam00373"
                     /db_xref="CDD:459788"
     Region          567..658
                     /region_name="FERM_C_fermitin"
                     /note="FERM domain C-lobe of the Fermitin family; cd13205"
                     /db_xref="CDD:270026"
     Site            order(577,595,597,605)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270026"
     Site            order(609,614..617,647,651,654..655)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270026"
     Site            647..658
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:270026"
     CDS             1..680
                     /gene="FERMT2"
                     /coded_by="XM_061157035.1:216..2258"
                     /db_xref="GeneID:133066208"
ORIGIN      
        1 maldgirmpd gcyadgtwel svhvtdlnrd vtlrvtgevh iggvmlklve kldvkkdwsd
       61 halwwekkrt wllkthwtld kygiqadakl qftpqhkllr lqlpnmkyvk vkvnfsdrvf
      121 kavsdicktf nirhpeelsl lkkprdptkk kkkklddqse dealelegpl itpgsgsiys
      181 spglysktmt ptydahdgsp lsptsawfgd salsegnpgi lavsqpitsp eilakmfkpq
      241 alldkakinq gwldssrslm eqdvkeneal llrfkyysff dlnpkydair inqlyeqakw
      301 ailleeiect eeemmmfaal qyhinklsim tsenhlnnsd kevdevdaal sdleitlegg
      361 ktstilgdit sipeladyik vfkpkkltlk gykqywctfk dtsiscyksk eessgtpahq
      421 mnlrgcevtp dvnisgqkfn ikllipvaeg mneiwlrcdn ekqyahwmaa crlaskgktm
      481 adssynlevq nilsflkmqh lnpdpqlipe qittdinpec lvsprylkky knkqitaril
      541 eahqnvaqms lieakmrfiq awqslpefgi thfiarfqgg kkeeligiay nrlirmdast
      601 gdaiktwrfs nmkqwnvnwe ikmvtvefad evrlsficte vdckvvhefi ggyiflstra
      661 kdqnesldee mfykltsgwv
//
LOCUS       XP_061013019             403 aa            linear   MAM 02-DEC-2023
DEFINITION  sorbitol dehydrogenase isoform X1 [Dama dama].
ACCESSION   XP_061013019
VERSION     XP_061013019.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157036.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..403
                     /product="sorbitol dehydrogenase isoform X1"
                     /calculated_mol_wt=43429
     Region          10..396
                     /region_name="sorbitol_DH"
                     /note="Sorbitol dehydrogenase; cd05285"
                     /db_xref="CDD:176188"
     Site            order(44,46,50,56,59,69,165,168,202,321,344..345)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:176188"
     Site            order(44,46,69..70,202)
                     /site_type="other"
                     /note="catalytic Zn binding site [ion binding]"
                     /db_xref="CDD:176188"
     Site            order(146,149,152,160)
                     /site_type="other"
                     /note="structural Zn binding site [ion binding]"
                     /db_xref="CDD:176188"
     Site            order(206,228..230,249..251,255,270,296..297,299,319..321,
                     343..345)
                     /site_type="other"
                     /note="NADP binding site [chemical binding]"
                     /db_xref="CDD:176188"
     Site            order(208,219,221,237,240..242,244,253,269,284,352,
                     355..356,359)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:176188"
     CDS             1..403
                     /gene="SORD"
                     /coded_by="XM_061157036.1:130..1341"
                     /db_xref="GeneID:133066210"
ORIGIN      
        1 maaakpenls lvvhgpgdlr lenypipepg pnevllkmhs vgicgsdvhy wqhgrigdfv
       61 vkkpmvlghe asgtvvkvgs lvrhlqpgeg nwnrqlikiv lraaeentgc dqcillsrtl
      121 aqlrkrqliq hpktsdrvai epgapretde fckigrynls ptiffcatpp ddgnlcrfyk
      181 hnanfcyklp dnvtfeegal ieplsvgiha crragvtlgn kvfvcgagpi glvsllaaka
      241 mgaaqvvvtd lsasrlskak evgadfilqi snespqeiak kvegllgskp evtiectgve
      301 tsiqagiyat hsggtlvlvg lgsemtsvpl vhaatrevdi kgvfrycntw pmaismlask
      361 svnvkplvth rfplekalea fetskkglgl kvmikcdpnd qnp
//
LOCUS       XP_061013021             356 aa            linear   MAM 02-DEC-2023
DEFINITION  sorbitol dehydrogenase isoform X2 [Dama dama].
ACCESSION   XP_061013021
VERSION     XP_061013021.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157038.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..356
                     /product="sorbitol dehydrogenase isoform X2"
                     /calculated_mol_wt=38002
     Region          10..349
                     /region_name="sorbitol_DH"
                     /note="Sorbitol dehydrogenase; cd05285"
                     /db_xref="CDD:176188"
     Site            order(44,46,50,56,59,69,118,121,155,274,297..298)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:176188"
     Site            order(44,46,69..70,155)
                     /site_type="other"
                     /note="catalytic Zn binding site [ion binding]"
                     /db_xref="CDD:176188"
     Site            order(99,102,105,113)
                     /site_type="other"
                     /note="structural Zn binding site [ion binding]"
                     /db_xref="CDD:176188"
     Site            order(159,181..183,202..204,208,223,249..250,252,272..274,
                     296..298)
                     /site_type="other"
                     /note="NADP binding site [chemical binding]"
                     /db_xref="CDD:176188"
     Site            order(161,172,174,190,193..195,197,206,222,237,305,
                     308..309,312)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:176188"
     CDS             1..356
                     /gene="SORD"
                     /coded_by="XM_061157038.1:125..1195"
                     /db_xref="GeneID:133066210"
ORIGIN      
        1 maaakpenls lvvhgpgdlr lenypipepg pnevllkmhs vgicgsdvhy wqhgrigdfv
       61 vkkpmvlghe asgtvvkvgs lvrhlqpgdr vaiepgapre tdefckigry nlsptiffca
      121 tppddgnlcr fykhnanfcy klpdnvtfee galieplsvg ihacrragvt lgnkvfvcga
      181 gpiglvslla akamgaaqvv vtdlsasrls kakevgadfi lqisnespqe iakkvegllg
      241 skpevtiect gvetsiqagi yathsggtlv lvglgsemts vplvhaatre vdikgvfryc
      301 ntwpmaisml asksvnvkpl vthrfpleka leafetskkg lglkvmikcd pndqnp
//
LOCUS       XP_061013022            1553 aa            linear   MAM 02-DEC-2023
DEFINITION  dual oxidase 1 [Dama dama].
ACCESSION   XP_061013022
VERSION     XP_061013022.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157039.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1553
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1553
                     /product="dual oxidase 1"
                     /calculated_mol_wt=177217
     Region          32..591
                     /region_name="dual_peroxidase_like"
                     /note="Dual oxidase and related animal heme peroxidases;
                     cd09820"
                     /db_xref="CDD:188652"
     Site            order(241..242,324,327..329,331,334,367,419,422,426)
                     /site_type="other"
                     /note="putative heme binding site [chemical binding]"
                     /db_xref="CDD:188652"
     Site            order(292,295..296,300,323,327,329,493,497,501..502,
                     505..506,509)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:188652"
     Region          820..881
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cd00051"
                     /db_xref="CDD:238008"
     Site            order(828,830,832,839,864,866,868,875)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238008"
     Region          853..925
                     /region_name="EF-hand_7"
                     /note="EF-hand domain pair; pfam13499"
                     /db_xref="CDD:463900"
     Region          1070..>1414
                     /region_name="PLN02292"
                     /note="ferric-chelate reductase"
                     /db_xref="CDD:215165"
     Region          1279..1553
                     /region_name="NOX_Duox_like_FAD_NADP"
                     /note="NADPH oxidase (NOX) catalyzes the generation of
                     reactive oxygen species (ROS) such as superoxide and
                     hydrogen peroxide. ROS were originally identified as
                     bactericidal agents in phagocytes, but are now also
                     implicated in cell signaling and metabolism. NOX...;
                     cd06186"
                     /db_xref="CDD:99783"
     Site            order(1307,1321..1324,1337..1339,1342..1345,1392)
                     /site_type="other"
                     /note="FAD binding pocket [chemical binding]"
                     /db_xref="CDD:99783"
     Site            order(1321,1323..1324)
                     /site_type="other"
                     /note="FAD binding motif [chemical binding]"
                     /db_xref="CDD:99783"
     Site            1387..1397
                     /site_type="other"
                     /note="NAD pyrophosphate binding region [chemical
                     binding]"
                     /db_xref="CDD:99783"
     Site            order(1387,1391..1394,1396)
                     /site_type="other"
                     /note="beta-alpha-beta stucture motif"
                     /db_xref="CDD:99783"
     Site            order(1392..1393,1424..1426,1523..1524)
                     /site_type="other"
                     /note="NAD binding pocket [chemical binding]"
                     /db_xref="CDD:99783"
     Site            order(1422..1423,1426)
                     /site_type="other"
                     /note="NADP ribose binding motif [chemical binding]"
                     /db_xref="CDD:99783"
     CDS             1..1553
                     /gene="DUOX1"
                     /coded_by="XM_061157039.1:171..4832"
                     /db_xref="GeneID:133066211"
ORIGIN      
        1 msfrfalawt llvgpwmpmg sqnsiswevq rfdgwynnlm ehrwgskgsr lqrlvpasya
       61 dgvyqplgep hlpnpralsn aamrgpagla slrnrtvlgv ffgyhvlsdl vsveksgcpa
      121 eflnihippg dpvfdrdrsg dvvlpfqrsr wdpetgqsps nprdltnevt gwldgsaiyg
      181 sshswsdelr sfsggqlasg pdpafpraaq apllmwtppd pttgrrgprg lyafgaergn
      241 repflqalgl lwfryhnlwa qrlarrhplw gdeelfqhar krviatyqni amyewlpsfl
      301 rkmppeyagy rpfldpsisp eflaaseqff stmvppgvym rnaschfqgv inrnssvpra
      361 lrvcnsywsr ehpnlqraed vdalllgmas qiaeredhvv vedvrdfwpg plkfsrtdhl
      421 ascllrgrdl glpsytkara tlglppvtrw qdinpalsqs dstvleataa lynqdlsrle
      481 llpggllesh gdpgplfsti vldqfvrlrd gdrywfensk nglfsekeiv eirntslrdv
      541 lvavtkvdpg alqpsvffwh agdpcpqpgq lsteglpaca ppimrdyfeg sgfgfgvtig
      601 tlccfplvsl lsawivaqlr rrnlkrlqgq drqsimcekl vggikamewq ghkepcrpvl
      661 vhlqpgqihv vdgrlsvlrt iqlrlpqqvn lilssnhgrr alllkipkey dlvllfdlee
      721 erqvmveslr galkesglsf qewelreqel mraavtreqr shlletffrh lfsqvldidq
      781 adagtlplds sqkvrealtc elsraefaes lglkpqdmfv esmfsladkd gngylsfref
      841 ldilvvfmkg speeksrlmf rmydfdgngl iskdefirml rsfieisnnc ltktqltevv
      901 esmfresgfq dkqeltwedf hfmlrdhdse lrftqlcvkg vevpevikdl crrasyisqe
      961 klcpsprvsa rcprkdtdig veltprrlqc pndtdppqei rrrfgkkvts fqpllfteah
     1021 rekfqrsrrh qtvqqfkrfv enyrrhigcl avfyaiaggl flerayyyaf aahhkgitdt
     1081 trvgiilsrg taasisfmfs yilltmcrnl itflretfln ryvpfdaavd fhrliastai
     1141 vltvlhsagh vvnvylfsis plsvlsclfp glfhdngsef pqkyywwffq tvpgltgvml
     1201 llilsimyif ashhfrrcsf rgfwlthhly illyvlliih gsfaliqlpr fhifflvpal
     1261 iyvgdklvsl srkkveisvv kaellpsgvt hlefqrpqgf eyksgqwvri aclalgttey
     1321 hpftltsaph eetlslhira agpwttrlre iyspptgdsc akypklyldg pfgeghqewh
     1381 kfevsvlvgg gigvtpfasi lkdlvfkssv scqvfckkiy fiwvtrtqrq fewladiire
     1441 veendrqdlv svhiyitqla ekfdlrttml yicerhfqkv lnrslftglr sithfgrppf
     1501 eaffnslqkv hpqvrkigvf scgppgmtkn vekacqlinr qdgthfshhy enf
//
LOCUS       XP_061013023            1548 aa            linear   MAM 02-DEC-2023
DEFINITION  dual oxidase 2 isoform X1 [Dama dama].
ACCESSION   XP_061013023
VERSION     XP_061013023.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157040.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1548
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1548
                     /product="dual oxidase 2 isoform X1"
                     /calculated_mol_wt=175575
     Region          45..601
                     /region_name="dual_peroxidase_like"
                     /note="Dual oxidase and related animal heme peroxidases;
                     cd09820"
                     /db_xref="CDD:188652"
     Site            order(254..255,337,340..342,344,347,380,432,435,439)
                     /site_type="other"
                     /note="putative heme binding site [chemical binding]"
                     /db_xref="CDD:188652"
     Site            order(305,308..309,313,336,340,342,503,507,511..512,
                     515..516,519)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:188652"
     Region          769..894
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     Region          868..926
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cd00051"
                     /db_xref="CDD:238008"
     Region          1037..1548
                     /region_name="COG4097"
                     /note="Predicted ferric reductase [Inorganic ion transport
                     and metabolism]"
                     /db_xref="CDD:443273"
     Region          1274..1548
                     /region_name="NOX_Duox_like_FAD_NADP"
                     /note="NADPH oxidase (NOX) catalyzes the generation of
                     reactive oxygen species (ROS) such as superoxide and
                     hydrogen peroxide. ROS were originally identified as
                     bactericidal agents in phagocytes, but are now also
                     implicated in cell signaling and metabolism. NOX...;
                     cd06186"
                     /db_xref="CDD:99783"
     Site            order(1302,1316..1319,1332..1334,1337..1340,1387)
                     /site_type="other"
                     /note="FAD binding pocket [chemical binding]"
                     /db_xref="CDD:99783"
     Site            order(1316,1318..1319)
                     /site_type="other"
                     /note="FAD binding motif [chemical binding]"
                     /db_xref="CDD:99783"
     Site            1382..1392
                     /site_type="other"
                     /note="NAD pyrophosphate binding region [chemical
                     binding]"
                     /db_xref="CDD:99783"
     Site            order(1382,1386..1389,1391)
                     /site_type="other"
                     /note="beta-alpha-beta stucture motif"
                     /db_xref="CDD:99783"
     Site            order(1387..1388,1419..1421,1518..1519)
                     /site_type="other"
                     /note="NAD binding pocket [chemical binding]"
                     /db_xref="CDD:99783"
     Site            order(1417..1418,1421)
                     /site_type="other"
                     /note="NADP ribose binding motif [chemical binding]"
                     /db_xref="CDD:99783"
     CDS             1..1548
                     /gene="LOC133066212"
                     /coded_by="XM_061157040.1:66..4712"
                     /db_xref="GeneID:133066212"
ORIGIN      
        1 mqrggvnmlr arpevlvllg vlltllldpt ggqdslsltw evqrydgwfn nlrhhergaa
       61 gsrlqrlvpa nyadgvyqal gepllpnprr lsnattqgra grpsgrnrtv lgvffgyhvl
      121 sdlvsveksg cpaeflnihi ppgdpvfdrd rsgdvvlpfq rsrwdpetgq spsnprdltn
      181 evtgwldgsa iygsshswsd elrsfsggql asgpdpafpr aaqapllmwt ppdpttgrrg
      241 prglyafgae rgnrepflqa lgllwfryhn lwaqrlarrh plwgdeelfq harkrviaty
      301 qniamyewlp sflqqtppny teyrpfldps ispeflaase qffstmvppg vymrnaschf
      361 qmvlnegfgs spalrvcnsy wirenpnlns aqavnqlllg masqiseled stvvedlrdy
      421 wpgpgkfsrt dyvassiqrg rdmglpsysq alqalglttp rnwsdlnpkv dpqvleatat
      481 lynqdlsrle llpggllesh gdpgplfsti vldqfvrlrd gdrywfensr nglfspeeia
      541 eirsttlrdv lvavtnvdpd tlqpnvfiwq ngapcpqprq ltikdlppcv plteihyfeg
      601 sgpgfgitiv alcclplvsl lisgvvayfr grerkklqrk rkesvkkepa sdgvsamewp
      661 gprersypvt iqllpdqrlq vvdrrlsvlr tiqlqppqkv nlilssnrgc ralllkipke
      721 ydlvllfnsq eergafvqhl rgfcenwalg ldvaemkeye lfrkavtkeq rerilevffr
      781 hlfaqvldin qvdagtllld ssqkvrealt celsraefae slglkpqdmf vesmfsladk
      841 dgngylsfre fldvlvvfmk gspedksrlm ftmydldgng flskdefftm mrsfieisnn
      901 cltkaqlaev vesmfqesgf qdkqeltwed fhfmlrdhds elrrtqlcvr gvgdifkpni
      961 ssrvsfitrt sgerscpqgv gfpaskapel ggpelkkrfg kkagvppprl ytealqekmq
     1021 rgflaqklqq ykrfvenyrr hivcvavfsa icaglfvera yyyafaspps giaqttfvgi
     1081 ilsrgtaasv sfmfsyillt mcrnlitflr etflnhyvpf daavdfhrwi amaavvlail
     1141 hsaghvvnvy ifsvsplsll acifpsvfvn dgsklpqkfy wwffqtvpgm tgvllllvla
     1201 imyvfashhf rrrsfrgfwl thhlyillyv lliihgsfal iqlprfhiyf lvpaliymgd
     1261 klvslsrkkv eigvvkaqll psgvthlefq rpqgfeyksg qwvriaclal gtneyhpftl
     1321 tsapheetls lhiravgpwt trlreiyslp tgdssakypk lyldgpfgeg hqewhkfevs
     1381 vlvgggigvt pfasilkdlv fksslgsqml ckkiyfiwvt rtqrqfewla diireveend
     1441 cqdlvsvhiy itqlaekfdl rttmlyicer hfqkvlnrsl ftglrsithf grppferffs
     1501 slqevhpkvr kigvfscgpp gmtknvekac qlinqqdqah fvhhyenf
//
LOCUS       XP_061013024            1520 aa            linear   MAM 02-DEC-2023
DEFINITION  dual oxidase 2 isoform X2 [Dama dama].
ACCESSION   XP_061013024
VERSION     XP_061013024.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157041.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1520
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1520
                     /product="dual oxidase 2 isoform X2"
                     /calculated_mol_wt=172678
     Region          45..601
                     /region_name="dual_peroxidase_like"
                     /note="Dual oxidase and related animal heme peroxidases;
                     cd09820"
                     /db_xref="CDD:188652"
     Site            order(254..255,337,340..342,344,347,380,432,435,439)
                     /site_type="other"
                     /note="putative heme binding site [chemical binding]"
                     /db_xref="CDD:188652"
     Site            order(305,308..309,313,336,340,342,503,507,511..512,
                     515..516,519)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:188652"
     Region          769..894
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     Region          868..926
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cd00051"
                     /db_xref="CDD:238008"
     Region          1009..1520
                     /region_name="COG4097"
                     /note="Predicted ferric reductase [Inorganic ion transport
                     and metabolism]"
                     /db_xref="CDD:443273"
     Region          1246..1520
                     /region_name="NOX_Duox_like_FAD_NADP"
                     /note="NADPH oxidase (NOX) catalyzes the generation of
                     reactive oxygen species (ROS) such as superoxide and
                     hydrogen peroxide. ROS were originally identified as
                     bactericidal agents in phagocytes, but are now also
                     implicated in cell signaling and metabolism. NOX...;
                     cd06186"
                     /db_xref="CDD:99783"
     Site            order(1274,1288..1291,1304..1306,1309..1312,1359)
                     /site_type="other"
                     /note="FAD binding pocket [chemical binding]"
                     /db_xref="CDD:99783"
     Site            order(1288,1290..1291)
                     /site_type="other"
                     /note="FAD binding motif [chemical binding]"
                     /db_xref="CDD:99783"
     Site            1354..1364
                     /site_type="other"
                     /note="NAD pyrophosphate binding region [chemical
                     binding]"
                     /db_xref="CDD:99783"
     Site            order(1354,1358..1361,1363)
                     /site_type="other"
                     /note="beta-alpha-beta stucture motif"
                     /db_xref="CDD:99783"
     Site            order(1359..1360,1391..1393,1490..1491)
                     /site_type="other"
                     /note="NAD binding pocket [chemical binding]"
                     /db_xref="CDD:99783"
     Site            order(1389..1390,1393)
                     /site_type="other"
                     /note="NADP ribose binding motif [chemical binding]"
                     /db_xref="CDD:99783"
     CDS             1..1520
                     /gene="LOC133066212"
                     /coded_by="XM_061157041.1:66..4628"
                     /db_xref="GeneID:133066212"
ORIGIN      
        1 mqrggvnmlr arpevlvllg vlltllldpt ggqdslsltw evqrydgwfn nlrhhergaa
       61 gsrlqrlvpa nyadgvyqal gepllpnprr lsnattqgra grpsgrnrtv lgvffgyhvl
      121 sdlvsveksg cpaeflnihi ppgdpvfdrd rsgdvvlpfq rsrwdpetgq spsnprdltn
      181 evtgwldgsa iygsshswsd elrsfsggql asgpdpafpr aaqapllmwt ppdpttgrrg
      241 prglyafgae rgnrepflqa lgllwfryhn lwaqrlarrh plwgdeelfq harkrviaty
      301 qniamyewlp sflqqtppny teyrpfldps ispeflaase qffstmvppg vymrnaschf
      361 qmvlnegfgs spalrvcnsy wirenpnlns aqavnqlllg masqiseled stvvedlrdy
      421 wpgpgkfsrt dyvassiqrg rdmglpsysq alqalglttp rnwsdlnpkv dpqvleatat
      481 lynqdlsrle llpggllesh gdpgplfsti vldqfvrlrd gdrywfensr nglfspeeia
      541 eirsttlrdv lvavtnvdpd tlqpnvfiwq ngapcpqprq ltikdlppcv plteihyfeg
      601 sgpgfgitiv alcclplvsl lisgvvayfr grerkklqrk rkesvkkepa sdgvsamewp
      661 gprersypvt iqllpdqrlq vvdrrlsvlr tiqlqppqkv nlilssnrgc ralllkipke
      721 ydlvllfnsq eergafvqhl rgfcenwalg ldvaemkeye lfrkavtkeq rerilevffr
      781 hlfaqvldin qvdagtllld ssqkvrealt celsraefae slglkpqdmf vesmfsladk
      841 dgngylsfre fldvlvvfmk gspedksrlm ftmydldgng flskdefftm mrsfieisnn
      901 cltkaqlaev vesmfqesgf qdkqeltwed fhfmlrdhds elrrtqlcvr gvgdifkpni
      961 ssrvsfitrt sgeragvppp rlytealqek mqrgflaqkl qqykrfveny rrhivcvavf
     1021 saicaglfve rayyyafasp psgiaqttfv giilsrgtaa svsfmfsyil ltmcrnlitf
     1081 lretflnhyv pfdaavdfhr wiamaavvla ilhsaghvvn vyifsvspls llacifpsvf
     1141 vndgsklpqk fywwffqtvp gmtgvllllv laimyvfash hfrrrsfrgf wlthhlyill
     1201 yvlliihgsf aliqlprfhi yflvpaliym gdklvslsrk kveigvvkaq llpsgvthle
     1261 fqrpqgfeyk sgqwvriacl algtneyhpf tltsapheet lslhiravgp wttrlreiys
     1321 lptgdssaky pklyldgpfg eghqewhkfe vsvlvgggig vtpfasilkd lvfksslgsq
     1381 mlckkiyfiw vtrtqrqfew ladiirevee ndcqdlvsvh iyitqlaekf dlrttmlyic
     1441 erhfqkvlnr slftglrsit hfgrppferf fsslqevhpk vrkigvfscg ppgmtknvek
     1501 acqlinqqdq ahfvhhyenf
//
LOCUS       XP_061013025            1459 aa            linear   MAM 02-DEC-2023
DEFINITION  dual oxidase 2 isoform X3 [Dama dama].
ACCESSION   XP_061013025
VERSION     XP_061013025.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157042.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1459
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1459
                     /product="dual oxidase 2 isoform X3"
                     /calculated_mol_wt=165801
     Region          45..512
                     /region_name="An_peroxidase_like"
                     /note="Animal heme peroxidases and related proteins;
                     cl14561"
                     /db_xref="CDD:353811"
     Site            order(305,308..309,313,336,340,342,414,418,422..423,
                     426..427,430)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:188647"
     Region          680..805
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     Region          779..837
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cd00051"
                     /db_xref="CDD:238008"
     Region          948..1440
                     /region_name="COG4097"
                     /note="Predicted ferric reductase [Inorganic ion transport
                     and metabolism]"
                     /db_xref="CDD:443273"
     Region          1185..1459
                     /region_name="NOX_Duox_like_FAD_NADP"
                     /note="NADPH oxidase (NOX) catalyzes the generation of
                     reactive oxygen species (ROS) such as superoxide and
                     hydrogen peroxide. ROS were originally identified as
                     bactericidal agents in phagocytes, but are now also
                     implicated in cell signaling and metabolism. NOX...;
                     cd06186"
                     /db_xref="CDD:99783"
     Site            order(1213,1227..1230,1243..1245,1248..1251,1298)
                     /site_type="other"
                     /note="FAD binding pocket [chemical binding]"
                     /db_xref="CDD:99783"
     Site            order(1227,1229..1230)
                     /site_type="other"
                     /note="FAD binding motif [chemical binding]"
                     /db_xref="CDD:99783"
     Site            1293..1303
                     /site_type="other"
                     /note="NAD pyrophosphate binding region [chemical
                     binding]"
                     /db_xref="CDD:99783"
     Site            order(1293,1297..1300,1302)
                     /site_type="other"
                     /note="beta-alpha-beta stucture motif"
                     /db_xref="CDD:99783"
     Site            order(1298..1299,1330..1332,1429..1430)
                     /site_type="other"
                     /note="NAD binding pocket [chemical binding]"
                     /db_xref="CDD:99783"
     Site            order(1328..1329,1332)
                     /site_type="other"
                     /note="NADP ribose binding motif [chemical binding]"
                     /db_xref="CDD:99783"
     CDS             1..1459
                     /gene="LOC133066212"
                     /coded_by="XM_061157042.1:66..4445"
                     /db_xref="GeneID:133066212"
ORIGIN      
        1 mqrggvnmlr arpevlvllg vlltllldpt ggqdslsltw evqrydgwfn nlrhhergaa
       61 gsrlqrlvpa nyadgvyqal gepllpnprr lsnattqgra grpsgrnrtv lgvffgyhvl
      121 sdlvsveksg cpaeflnihi ppgdpvfdrd rsgdvvlpfq rsrwdpetgq spsnprdltn
      181 evtgwldgsa iygsshswsd elrsfsggql asgpdpafpr aaqapllmwt ppdpttgrrg
      241 prglyafgae rgnrepflqa lgllwfryhn lwaqrlarrh plwgdeelfq harkrviaty
      301 qniamyewlp sflqqtppny teyrpfldps ispeflaase qffstmvppg vymrnaschf
      361 qmvlnegfgs spalrvcnsy wirevleata tlynqdlsrl ellpgglles hgdpgplfst
      421 ivldqfvrlr dgdrywfens rnglfspeei aeirsttlrd vlvavtnvdp dtlqpnvfiw
      481 qngapcpqpr qltikdlppc vplteihyfe gsgpgfgiti valcclplvs llisgvvayf
      541 rgrerkklqr krkesvkkep asdgvsamew pgprersypv tiqllpdqrl qvvdrrlsvl
      601 rtiqlqppqk vnlilssnrg cralllkipk eydlvllfns qeergafvqh lrgfcenwal
      661 gldvaemkey elfrkavtke qrerilevff rhlfaqvldi nqvdagtlll dssqkvreal
      721 tcelsraefa eslglkpqdm fvesmfslad kdgngylsfr efldvlvvfm kgspedksrl
      781 mftmydldgn gflskdefft mmrsfieisn ncltkaqlae vvesmfqesg fqdkqeltwe
      841 dfhfmlrdhd selrrtqlcv rgvgdifkpn issrvsfitr tsgerscpqg vgfpaskape
      901 lggpelkkrf gkkagvpppr lytealqekm qrgflaqklq qykrfvenyr rhivcvavfs
      961 aicaglfver ayyyafaspp sgiaqttfvg iilsrgtaas vsfmfsyill tmcrnlitfl
     1021 retflnhyvp fdaavdfhrw iamaavvlai lhsaghvvnv yifsvsplsl lacifpsvfv
     1081 ndgsklpqkf ywwffqtvpg mtgvllllvl aimyvfashh frrrsfrgfw lthhlyilly
     1141 vlliihgsfa liqlprfhiy flvpaliymg dklvslsrkk veigvvkaql lpsgvthlef
     1201 qrpqgfeyks gqwvriacla lgtneyhpft ltsapheetl slhiravgpw ttrlreiysl
     1261 ptgdssakyp klyldgpfge ghqewhkfev svlvgggigv tpfasilkdl vfksslgsqm
     1321 lckkiyfiwv trtqrqfewl adiireveen dcqdlvsvhi yitqlaekfd lrttmlyice
     1381 rhfqkvlnrs lftglrsith fgrppferff sslqevhpkv rkigvfscgp pgmtknveka
     1441 cqlinqqdqa hfvhhyenf
//
LOCUS       XP_061013026            1290 aa            linear   MAM 02-DEC-2023
DEFINITION  dual oxidase 2 isoform X4 [Dama dama].
ACCESSION   XP_061013026
VERSION     XP_061013026.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157043.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1290
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1290
                     /product="dual oxidase 2 isoform X4"
                     /calculated_mol_wt=145455
     Region          <161..343
                     /region_name="An_peroxidase_like"
                     /note="Animal heme peroxidases and related proteins;
                     cl14561"
                     /db_xref="CDD:353811"
     Region          511..636
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     Region          610..668
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cd00051"
                     /db_xref="CDD:238008"
     Region          779..1290
                     /region_name="COG4097"
                     /note="Predicted ferric reductase [Inorganic ion transport
                     and metabolism]"
                     /db_xref="CDD:443273"
     Region          1016..1290
                     /region_name="NOX_Duox_like_FAD_NADP"
                     /note="NADPH oxidase (NOX) catalyzes the generation of
                     reactive oxygen species (ROS) such as superoxide and
                     hydrogen peroxide. ROS were originally identified as
                     bactericidal agents in phagocytes, but are now also
                     implicated in cell signaling and metabolism. NOX...;
                     cd06186"
                     /db_xref="CDD:99783"
     Site            order(1044,1058..1061,1074..1076,1079..1082,1129)
                     /site_type="other"
                     /note="FAD binding pocket [chemical binding]"
                     /db_xref="CDD:99783"
     Site            order(1058,1060..1061)
                     /site_type="other"
                     /note="FAD binding motif [chemical binding]"
                     /db_xref="CDD:99783"
     Site            1124..1134
                     /site_type="other"
                     /note="NAD pyrophosphate binding region [chemical
                     binding]"
                     /db_xref="CDD:99783"
     Site            order(1124,1128..1131,1133)
                     /site_type="other"
                     /note="beta-alpha-beta stucture motif"
                     /db_xref="CDD:99783"
     Site            order(1129..1130,1161..1163,1260..1261)
                     /site_type="other"
                     /note="NAD binding pocket [chemical binding]"
                     /db_xref="CDD:99783"
     Site            order(1159..1160,1163)
                     /site_type="other"
                     /note="NADP ribose binding motif [chemical binding]"
                     /db_xref="CDD:99783"
     CDS             1..1290
                     /gene="LOC133066212"
                     /coded_by="XM_061157043.1:183..4055"
                     /db_xref="GeneID:133066212"
ORIGIN      
        1 mdprtpgats cgaspggswr rgptppsrgp rrprcscghr rippraaagr ggctpsgpse
       61 gtaspscrrw vcsgsvittc grrgwpagir sggtrscfst rargsspptr tspcmsgcpa
      121 scskhlqitq kcqlsfpdgp ergfwqlpss qslqqlldsg dywpgpgkfs rtdyvassiq
      181 rgrdmglpsy sqalqalglt tprnwsdlnp kvdpqvleat atlynqdlsr lellpgglle
      241 shgdpgplfs tivldqfvrl rdgdrywfen srnglfspee iaeirsttlr dvlvavtnvd
      301 pdtlqpnvfi wqngapcpqp rqltikdlpp cvplteihyf egsgpgfgit ivalcclplv
      361 sllisgvvay frgrerkklq rkrkesvkke pasdgvsame wpgprersyp vtiqllpdqr
      421 lqvvdrrlsv lrtiqlqppq kvnlilssnr gcralllkip keydlvllfn sqeergafvq
      481 hlrgfcenwa lgldvaemke yelfrkavtk eqrerilevf frhlfaqvld inqvdagtll
      541 ldssqkvrea ltcelsraef aeslglkpqd mfvesmfsla dkdgngylsf refldvlvvf
      601 mkgspedksr lmftmydldg ngflskdeff tmmrsfieis nncltkaqla evvesmfqes
      661 gfqdkqeltw edfhfmlrdh dselrrtqlc vrgvgdifkp nissrvsfit rtsgerscpq
      721 gvgfpaskap elggpelkkr fgkkagvppp rlytealqek mqrgflaqkl qqykrfveny
      781 rrhivcvavf saicaglfve rayyyafasp psgiaqttfv giilsrgtaa svsfmfsyil
      841 ltmcrnlitf lretflnhyv pfdaavdfhr wiamaavvla ilhsaghvvn vyifsvspls
      901 llacifpsvf vndgsklpqk fywwffqtvp gmtgvllllv laimyvfash hfrrrsfrgf
      961 wlthhlyill yvlliihgsf aliqlprfhi yflvpaliym gdklvslsrk kveigvvkaq
     1021 llpsgvthle fqrpqgfeyk sgqwvriacl algtneyhpf tltsapheet lslhiravgp
     1081 wttrlreiys lptgdssaky pklyldgpfg eghqewhkfe vsvlvgggig vtpfasilkd
     1141 lvfksslgsq mlckkiyfiw vtrtqrqfew ladiirevee ndcqdlvsvh iyitqlaekf
     1201 dlrttmlyic erhfqkvlnr slftglrsit hfgrppferf fsslqevhpk vrkigvfscg
     1261 ppgmtknvek acqlinqqdq ahfvhhyenf
//
LOCUS       XP_061013027             337 aa            linear   MAM 02-DEC-2023
DEFINITION  dual oxidase maturation factor 1 [Dama dama].
ACCESSION   XP_061013027
VERSION     XP_061013027.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157044.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..337
                     /product="dual oxidase maturation factor 1"
                     /calculated_mol_wt=36698
     Region          10..287
                     /region_name="DuoxA"
                     /note="Dual oxidase maturation factor; pfam10204"
                     /db_xref="CDD:462995"
     CDS             1..337
                     /gene="DUOXA1"
                     /coded_by="XM_061157044.1:648..1661"
                     /db_xref="GeneID:133066213"
ORIGIN      
        1 maafgytfpf yagpkptfpt dttlavivai fltslatfii ilpgirgkmr lfwmlrvvts
       61 lfigavilav nfssewsvgq vstntsykaf ssrwisanvg lqiglggvni tltgtpvqql
      121 netidyneef twslgenyae eyasalekgl pdpllylaek ftphspcglh gqyrlaghyt
      181 samlwvaflc wllanvmlsm pvlvygghml latglfqllg llffstatsl tppcplrlga
      241 atlhthrgpa ywitlttgll cvllglamvv ahrmqphrlk affsqsvged pvleldpeeg
      301 gllspryrsi tespepqdip lseasseapc eepecal
//
LOCUS       XP_061013028             320 aa            linear   MAM 02-DEC-2023
DEFINITION  dual oxidase maturation factor 2-like isoform X1 [Dama dama].
ACCESSION   XP_061013028
VERSION     XP_061013028.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157045.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..320
                     /product="dual oxidase maturation factor 2-like isoform
                     X1"
                     /calculated_mol_wt=34885
     Region          10..283
                     /region_name="DuoxA"
                     /note="Dual oxidase maturation factor; pfam10204"
                     /db_xref="CDD:462995"
     CDS             1..320
                     /gene="LOC133066214"
                     /coded_by="XM_061157045.1:302..1264"
                     /db_xref="GeneID:133066214"
ORIGIN      
        1 mtlwdgvlpf ypqprhaagl sipllivilv flvlaasfll ilpgirghsr wfwlvrvlls
       61 lfigaeivaa hfsaewsvgs vstktsykaf svervrahvg lhvglegvni tltgtpvqql
      121 netidyneqf iwrvgqnyag ayaealekgl pypvlylaek ftpsspcgvy rqyrlaghya
      181 satlwvafcf wllsnmllsm pvphygglal litgafalfs vfafasissv plcqlrlgss
      241 eltthygaaf witlatgvlc lllgaavlsl hyarpsalrl flegsvkdle sptkgsspli
      301 lsnplhkqfr asdltistnl
//
LOCUS       XP_061013029             276 aa            linear   MAM 02-DEC-2023
DEFINITION  dual oxidase maturation factor 2-like isoform X2 [Dama dama].
ACCESSION   XP_061013029
VERSION     XP_061013029.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157046.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..276
                     /product="dual oxidase maturation factor 2-like isoform
                     X2"
                     /calculated_mol_wt=30108
     Region          10..239
                     /region_name="DuoxA"
                     /note="Dual oxidase maturation factor; pfam10204"
                     /db_xref="CDD:462995"
     CDS             1..276
                     /gene="LOC133066214"
                     /coded_by="XM_061157046.1:309..1139"
                     /db_xref="GeneID:133066214"
ORIGIN      
        1 mtlwdgvlpf ypqprhaagl sipllivilv flvlaasfll ilpgirghsr wfwlvrvlls
       61 lfigaeivaa hfsaewsvgs vstktsykaf svervrahvg lhvglegvni tltgtpvqql
      121 netidyneqf iwrvgqnyag ayaealekgl pypvlylaek ftpsspcgvy rqyrlaghya
      181 satlcvplcq lrlgsseltt hygaafwitl atgvlclllg aavlslhyar psalrlfleg
      241 svkdlesptk gssplilsnp lhkqfrasdl tistnl
//
LOCUS       XP_061013030             490 aa            linear   MAM 02-DEC-2023
DEFINITION  SH2 domain-containing adapter protein F isoform X1 [Dama dama].
ACCESSION   XP_061013030
VERSION     XP_061013030.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157047.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..490
                     /product="SH2 domain-containing adapter protein F isoform
                     X1"
                     /calculated_mol_wt=51540
     Region          388..485
                     /region_name="SH2_SHF"
                     /note="Src homology 2 domain found in SH2
                     domain-containing adapter protein F (SHF); cd10392"
                     /db_xref="CDD:198255"
     Site            order(397,415,436,438)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198255"
     Site            order(437,466)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198255"
     CDS             1..490
                     /gene="SHF"
                     /coded_by="XM_061157047.1:1..1473"
                     /db_xref="GeneID:133066216"
ORIGIN      
        1 mllsgappag sgpgpraqgn agggpagsrr gaggagagpg gggsggvakw lrehlgfrgg
       61 gggggggggk pappepdyrp papspaappa pppdilaayr lqrerdfedp ysggpsgtaa
      121 latpaapgpt ppprhgspph rlirvetpgp papppeeris ghpassdrla iledyadpfd
      181 vqetgegpig asgapekvpe ndgymepyea qkmmaeirgs ketaaqplpl ydtpyepeee
      241 gatpegegap wpresrlped derppeeydq pwewkkeris kafavdikvi kdlpwpppvg
      301 qldsspslpd gdrdisgpas pvpepgledg saqfegseks clspgreekg rlpprlsagn
      361 pksakplsve pssplgewtd palplenqvw yhgaisrtda enllrlckea sylvrnsets
      421 kndfslslks sqgfmhmkls rtkehkyvlg qnsppfssvp eivhhyasrk lpikgaehms
      481 llypvairtl
//
LOCUS       XP_061013031             443 aa            linear   MAM 02-DEC-2023
DEFINITION  SH2 domain-containing adapter protein F isoform X2 [Dama dama].
ACCESSION   XP_061013031
VERSION     XP_061013031.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157048.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..443
                     /product="SH2 domain-containing adapter protein F isoform
                     X2"
                     /calculated_mol_wt=46710
     Region          341..438
                     /region_name="SH2_SHF"
                     /note="Src homology 2 domain found in SH2
                     domain-containing adapter protein F (SHF); cd10392"
                     /db_xref="CDD:198255"
     Site            order(350,368,389,391)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198255"
     Site            order(390,419)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198255"
     CDS             1..443
                     /gene="SHF"
                     /coded_by="XM_061157048.1:1..1332"
                     /db_xref="GeneID:133066216"
ORIGIN      
        1 mllsgappag sgpgpraqgn agggpagsrr gaggagagpg gggsggvakw lrehlgfrgg
       61 gggggggggk pappepdyrp papspaappa pppdilaayr lqrerdfedp ysggpsgtaa
      121 latpaapgpt ppprhgspph rlirvetpgp papppeeris ghpassdrla iledyadpfd
      181 vqetgegpig asgapekvpe ndgymepyea qkmmaeirgs ketaaqplpl ydtpyepeee
      241 gatpegegap wpresrlped derppeeydq pwewkkeris kafaaqfegs eksclspgre
      301 ekgrlpprls agnpksakpl svepssplge wtdpalplen qvwyhgaisr tdaenllrlc
      361 keasylvrns etskndfsls lkssqgfmhm klsrtkehky vlgqnsppfs svpeivhhya
      421 srklpikgae hmsllypvai rtl
//
LOCUS       XP_061013032             416 aa            linear   MAM 02-DEC-2023
DEFINITION  SH2 domain-containing adapter protein F isoform X3 [Dama dama].
ACCESSION   XP_061013032
VERSION     XP_061013032.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157049.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..416
                     /product="SH2 domain-containing adapter protein F isoform
                     X3"
                     /calculated_mol_wt=42950
     CDS             1..416
                     /gene="SHF"
                     /coded_by="XM_061157049.1:1..1251"
                     /db_xref="GeneID:133066216"
ORIGIN      
        1 mllsgappag sgpgpraqgn agggpagsrr gaggagagpg gggsggvakw lrehlgfrgg
       61 gggggggggk pappepdyrp papspaappa pppdilaayr lqrerdfedp ysggpsgtaa
      121 latpaapgpt ppprhgspph rlirvetpgp papppeeris ghpassdrla iledyadpfd
      181 vqetgegpig asgapekvpe ndgymepyea qkmmaeirgs ketaaqplpl ydtpyepeee
      241 gatpegegap wpresrlped derppeeydq pwewkkeris kafavdikvi kdlpwpppvg
      301 qldsspslpd gdrdisgpas pvpepgledg saqfegseks clspgreekg rlpprlsagn
      361 pksakplsve pssplgewtd palplenqlv srghqpnrcr epapavqrgq lsgaqq
//
LOCUS       XP_061013033             369 aa            linear   MAM 02-DEC-2023
DEFINITION  SH2 domain-containing adapter protein F isoform X4 [Dama dama].
ACCESSION   XP_061013033
VERSION     XP_061013033.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157050.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..369
                     /product="SH2 domain-containing adapter protein F isoform
                     X4"
                     /calculated_mol_wt=38121
     CDS             1..369
                     /gene="SHF"
                     /coded_by="XM_061157050.1:1..1110"
                     /db_xref="GeneID:133066216"
ORIGIN      
        1 mllsgappag sgpgpraqgn agggpagsrr gaggagagpg gggsggvakw lrehlgfrgg
       61 gggggggggk pappepdyrp papspaappa pppdilaayr lqrerdfedp ysggpsgtaa
      121 latpaapgpt ppprhgspph rlirvetpgp papppeeris ghpassdrla iledyadpfd
      181 vqetgegpig asgapekvpe ndgymepyea qkmmaeirgs ketaaqplpl ydtpyepeee
      241 gatpegegap wpresrlped derppeeydq pwewkkeris kafaaqfegs eksclspgre
      301 ekgrlpprls agnpksakpl svepssplge wtdpalplen qlvsrghqpn rcrepapavq
      361 rgqlsgaqq
//
LOCUS       XP_061013034             347 aa            linear   MAM 02-DEC-2023
DEFINITION  SH2 domain-containing adapter protein F isoform X5 [Dama dama].
ACCESSION   XP_061013034
VERSION     XP_061013034.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157051.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..347
                     /product="SH2 domain-containing adapter protein F isoform
                     X5"
                     /calculated_mol_wt=38093
     Region          <69..241
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          245..342
                     /region_name="SH2_SHF"
                     /note="Src homology 2 domain found in SH2
                     domain-containing adapter protein F (SHF); cd10392"
                     /db_xref="CDD:198255"
     Site            order(254,272,293,295)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198255"
     Site            order(294,323)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198255"
     CDS             1..347
                     /gene="SHF"
                     /coded_by="XM_061157051.1:317..1360"
                     /db_xref="GeneID:133066216"
ORIGIN      
        1 mglslnshkk enqfgataql psrcglaile dyadpfdvqe tgegpigasg apekvpendg
       61 ymepyeaqkm maeirgsket aaqplplydt pyepeeegat pegegapwpr esrlpedder
      121 ppeeydqpwe wkkeriskaf avdikvikdl pwpppvgqld sspslpdgdr disgpaspvp
      181 epgledgsaq fegsekscls pgreekgrlp prlsagnpks akplsvepss plgewtdpal
      241 plenqvwyhg aisrtdaenl lrlckeasyl vrnsetsknd fslslkssqg fmhmklsrtk
      301 ehkyvlgqns ppfssvpeiv hhyasrklpi kgaehmslly pvairtl
//
LOCUS       XP_061013035             332 aa            linear   MAM 02-DEC-2023
DEFINITION  SH2 domain-containing adapter protein F isoform X6 [Dama dama].
ACCESSION   XP_061013035
VERSION     XP_061013035.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157052.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..332
                     /product="SH2 domain-containing adapter protein F isoform
                     X6"
                     /calculated_mol_wt=34045
     CDS             1..332
                     /gene="SHF"
                     /coded_by="XM_061157052.1:1..999"
                     /db_xref="GeneID:133066216"
ORIGIN      
        1 mllsgappag sgpgpraqgn agggpagsrr gaggagagpg gggsggvakw lrehlgfrgg
       61 gggggggggk pappepdyrp papspaappa pppdilaayr lqrerdfedp ysggpsgtaa
      121 latpaapgpt ppprhgspph rlirvetpgp papppeeris ghpassdrla iledyadpfd
      181 vqetgegpig asgapekvpe ndgymepyea qkmmaeirgs ketaaqplpl ydtpyepeee
      241 gatpegegap wpresrlped derppeeydq pwewkkeris kafaagitgp saeqmprtcs
      301 gcakrpviwc atvrpartts pcpsravrvs ct
//
LOCUS       XP_061013036             292 aa            linear   MAM 02-DEC-2023
DEFINITION  SH2 domain-containing adapter protein F isoform X7 [Dama dama].
ACCESSION   XP_061013036
VERSION     XP_061013036.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157053.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..292
                     /product="SH2 domain-containing adapter protein F isoform
                     X7"
                     /calculated_mol_wt=29818
     CDS             1..292
                     /gene="SHF"
                     /coded_by="XM_061157053.1:1..879"
                     /db_xref="GeneID:133066216"
ORIGIN      
        1 mllsgappag sgpgpraqgn agggpagsrr gaggagagpg gggsggvakw lrehlgfrgg
       61 gggggggggk pappepdyrp papspaappa pppdilaayr lqrerdfedp ysggpsgtaa
      121 latpaapgpt ppprhgspph rlirvetpgp papppeeris ghpassdrla iledyadpfd
      181 vqetgegpig asgapekvpe ndgymepyea qkmmaeirgs ketaaqplpl ydtpyepeee
      241 gatpegegap wpresrlped derppeeydq pwewkkeris kafagavrvs ct
//
LOCUS       XP_061013037             286 aa            linear   MAM 02-DEC-2023
DEFINITION  SH2 domain-containing adapter protein F isoform X8 [Dama dama].
ACCESSION   XP_061013037
VERSION     XP_061013037.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157054.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..286
                     /product="SH2 domain-containing adapter protein F isoform
                     X8"
                     /calculated_mol_wt=31689
     Region          <8..180
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          184..281
                     /region_name="SH2_SHF"
                     /note="Src homology 2 domain found in SH2
                     domain-containing adapter protein F (SHF); cd10392"
                     /db_xref="CDD:198255"
     Site            order(193,211,232,234)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198255"
     Site            order(233,262)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198255"
     CDS             1..286
                     /gene="SHF"
                     /coded_by="XM_061157054.1:232..1092"
                     /db_xref="GeneID:133066216"
ORIGIN      
        1 mepyeaqkmm aeirgsketa aqplplydtp yepeeegatp egegapwpre srlpedderp
       61 peeydqpwew kkeriskafa vdikvikdlp wpppvgqlds spslpdgdrd isgpaspvpe
      121 pgledgsaqf egseksclsp greekgrlpp rlsagnpksa kplsvepssp lgewtdpalp
      181 lenqvwyhga isrtdaenll rlckeasylv rnsetskndf slslkssqgf mhmklsrtke
      241 hkyvlgqnsp pfssvpeivh hyasrklpik gaehmsllyp vairtl
//
LOCUS       XP_061013038             660 aa            linear   MAM 02-DEC-2023
DEFINITION  sodium/nucleoside cotransporter 2 isoform X1 [Dama dama].
ACCESSION   XP_061013038
VERSION     XP_061013038.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157055.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..660
                     /product="sodium/nucleoside cotransporter 2 isoform X1"
                     /calculated_mol_wt=72364
     Region          175..586
                     /region_name="nupC"
                     /note="nucleoside transporter; TIGR00804"
                     /db_xref="CDD:273278"
     CDS             1..660
                     /gene="SLC28A2"
                     /coded_by="XM_061157055.1:135..2117"
                     /db_xref="GeneID:133066217"
ORIGIN      
        1 meksngkeaf alstvetgie spglklteeg inpegskrte erghslrrgg lepptqlrrt
       61 lqpftkarsf ckthaglfkk illsllclay aayflaacil dfhralalfv ltclvllvlv
      121 hrflkrlfge kltrclrple nsrlkfwmkw vlagvsligl ilwlaldtaq rpeqlisfvg
      181 icmfiiilfa cskhhsavsw ravlwglglq fvfgilvirt dpgfnafrwl geqvqiflsy
      241 tvagssfvfg dvlvkdvfaf qalpiilffg cvmsilyylg lvqwvvqkia wflqitmgtt
      301 atetlavagn ifvgmteapl lirpyladmt lseihavmtg gfatisgtvl gafisfgida
      361 sslisasvma apsalalskl vypeveeskf knkagvklpr gkeknvleaa sngatdavgl
      421 atnvaanlia flavlafina alswlgemvd iqgltfqvic syvlrpmvfm mgvewadcpm
      481 vaemvgmkff tnefvafqql sqyknkrlsg veewikgkkq wisvraeiit tfslcgfanl
      541 ssigitlggl tsmvphrksd lskvvvsalf tgacvslisa cvagilyvpr gaetdcvsfl
      601 nmsftnrtye tyvccrelfq stslngtynp psfsgpwedk efsaialync cdlytsavcv
//
LOCUS       XP_061013039             622 aa            linear   MAM 02-DEC-2023
DEFINITION  sodium/nucleoside cotransporter 2 isoform X2 [Dama dama].
ACCESSION   XP_061013039
VERSION     XP_061013039.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157056.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..622
                     /product="sodium/nucleoside cotransporter 2 isoform X2"
                     /calculated_mol_wt=68004
     Region          175..548
                     /region_name="nupC"
                     /note="nucleoside transporter; TIGR00804"
                     /db_xref="CDD:273278"
     CDS             1..622
                     /gene="SLC28A2"
                     /coded_by="XM_061157056.1:135..2003"
                     /db_xref="GeneID:133066217"
ORIGIN      
        1 meksngkeaf alstvetgie spglklteeg inpegskrte erghslrrgg lepptqlrrt
       61 lqpftkarsf ckthaglfkk illsllclay aayflaacil dfhralalfv ltclvllvlv
      121 hrflkrlfge kltrclrple nsrlkfwmkw vlagvsligl ilwlaldtaq rpeqlisfvg
      181 icmfiiilfa cskhhsaifl sytvagssfv fgdvlvkdvf afqalpiilf fgcvmsilyy
      241 lglvqwvvqk iawflqitmg ttatetlava gnifvgmtea pllirpylad mtlseihavm
      301 tggfatisgt vlgafisfgi dasslisasv maapsalals klvypevees kfknkagvkl
      361 prgkeknvle aasngatdav glatnvaanl iaflavlafi naalswlgem vdiqgltfqv
      421 icsyvlrpmv fmmgvewadc pmvaemvgmk fftnefvafq qlsqyknkrl sgveewikgk
      481 kqwisvraei ittfslcgfa nlssigitlg gltsmvphrk sdlskvvvsa lftgacvsli
      541 sacvagilyv prgaetdcvs flnmsftnrt yetyvccrel fqstslngty nppsfsgpwe
      601 dkefsaialy nccdlytsav cv
//
LOCUS       XP_061013040             423 aa            linear   MAM 02-DEC-2023
DEFINITION  glycine amidinotransferase, mitochondrial [Dama dama].
ACCESSION   XP_061013040
VERSION     XP_061013040.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157057.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..423
                     /product="glycine amidinotransferase, mitochondrial"
                     /calculated_mol_wt=48278
     Region          65..415
                     /region_name="amidinotransferase_AGAT-like"
                     /note="L-arginine:glycine amidinotransferase and similar
                     proteins; cd21136"
                     /db_xref="CDD:439148"
     Site            order(167,169..170,256,303,305..306,322,354..355,361,402,
                     406..407)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:439148"
     CDS             1..423
                     /gene="GATM"
                     /coded_by="XM_061157057.1:86..1357"
                     /db_xref="GeneID:133066218"
ORIGIN      
        1 mlrvrclrgg srgaealhyi gsrlgrtvtg wvqrtfqstq aatassrnsc aaddkatdpl
       61 pkdcpvssfn ewdpleeviv graenacvpp ftvevkanty ekywpfyqky ggsyfpkdhl
      121 kkavaeieem cnilkmegvt vrrpdpidws lkyktpdfes tglygamprd ilivvgneii
      181 eapmawrsrf feyrayraii kdyfrrgakw ttapkptmad elydqdypvh svedrhklaa
      241 qgkfvttefe pcfdaadfir agrdifvqrs qvtnymgiew mrkhlapdyr vhiisfkdpn
      301 pmhidatfni igpglvlsnp drpchqidlf kkagwtivtp pipvipddhp lwmsskwlsm
      361 nvlmldekrv mvdanevpiq kmfeklgist ikvnirnans lgggfhcwtc dvrrrgtlqs
      421 yfd
//
LOCUS       XP_061013041             767 aa            linear   MAM 02-DEC-2023
DEFINITION  ATPase family gene 2 protein homolog B isoform X1 [Dama dama].
ACCESSION   XP_061013041
VERSION     XP_061013041.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157058.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..767
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..767
                     /product="ATPase family gene 2 protein homolog B isoform
                     X1"
                     /calculated_mol_wt=82647
     Region          22..757
                     /region_name="CDC48"
                     /note="AAA family ATPase, CDC48 subfamily; TIGR01243"
                     /db_xref="CDD:273521"
     CDS             1..767
                     /gene="AFG2B"
                     /coded_by="XM_061157058.1:63..2366"
                     /db_xref="GeneID:133066222"
ORIGIN      
        1 mapdsgsfpe gpplkllpvd ardrgtqrcr lgptalralg ahlgsavkis lpdggsclct
       61 awprrdgadg fvqldplcts pgtavgapgf rgiinlnrfr lvpcpplrrl avwpelreqa
      121 gasgaqstaa vleavqellr nrpvsqghvv aappgapgpv aalhivsgap spnpaglvtp
      181 rthislsevp rseeepqsev tlgglseaad slrellrlpl rypralaslg levprgvlla
      241 gppgvgktql vravaretga ellavsapal qgsrpgetee nvrrifqrar elasrcptll
      301 fldevdalcp rrggphqape srvvaqvltl ldgiaedrev vvvgstnrpd aldpalrrpg
      361 rfdrevvigt ptlkqrkail qvitskmpvs gqvdlnllae mtvgyvgadl talcreaamq
      421 allhseknqd nptidetdfl eafkkiqpss lrsvigltdi kpvgweqigg ledvklklkq
      481 siewplkfpr efvrmgltqp kgvllygppg cakttlvral atschcsfvs vsgadlfspf
      541 vgdsekilsq vfrqarantp aivfldeids ilgsrsisrt ecnvqdrvls vllneldgvg
      601 lktierrgsk sdqhgkckql ekneelefqe ifnsnvmvva atnrpdvldd allrpgrldk
      661 iiyipppdek grlsilkvct knmpmgpdvs lekvaaetcf fsgadlgnlc keaallalqe
      721 ngleattvkq ehfleslkti kpslshkdlt lyknlfqkke fsiledi
//
LOCUS       XP_061013042             755 aa            linear   MAM 02-DEC-2023
DEFINITION  ATPase family gene 2 protein homolog B isoform X2 [Dama dama].
ACCESSION   XP_061013042
VERSION     XP_061013042.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157059.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..755
                     /product="ATPase family gene 2 protein homolog B isoform
                     X2"
                     /calculated_mol_wt=81246
     Region          22..745
                     /region_name="CDC48"
                     /note="AAA family ATPase, CDC48 subfamily; TIGR01243"
                     /db_xref="CDD:273521"
     CDS             1..755
                     /gene="AFG2B"
                     /coded_by="XM_061157059.1:63..2330"
                     /db_xref="GeneID:133066222"
ORIGIN      
        1 mapdsgsfpe gpplkllpvd ardrgtqrcr lgptalralg ahlgsavkis lpdggsclct
       61 awprrdgadg fvqldplcts pgtavgapgf rgiinlnrfr lvpcpplrrl avwpelreqa
      121 gasgaqstaa vleavqellr nrpvsqghvv aappgapgpv aalhivsgap spnpaglvtp
      181 rthislsevp rseeepqsev tlgglseaad slrellrlpl rypralaslg levprgvlla
      241 gppgvgktql vravaretga ellavsapal qgsrpgetee nvrrifqrar elasrcptll
      301 fldevdalcp rrggphqape srvvaqvltl ldgiaedrev vvvgstnrpd aldpalrrpg
      361 rfdrevvigt ptlkqrkail qvitskmpvs gqvdlnllae mtvgyvgadl talcreaamq
      421 allhseknqd nptidetdfl eafkkiqpss lrsvigltdi kpvgweqigg ledvklklkq
      481 siewplkfpr efvrmgltqp kgvllygppg cakttlvral atschcsfvs vsgadlfspf
      541 vgdsekilsq vfrqarantp aivfldeids ilgsrsisrt ecnvqdrvls vllneldgvg
      601 lktierrgsk sdqhefqeif nsnvmvvaat nrpdvlddal lrpgrldkii yipppdekgr
      661 lsilkvctkn mpmgpdvsle kvaaetcffs gadlgnlcke aallalqeng leattvkqeh
      721 fleslktikp slshkdltly knlfqkkefs iledi
//
LOCUS       XP_061013043             622 aa            linear   MAM 02-DEC-2023
DEFINITION  ATPase family gene 2 protein homolog B isoform X3 [Dama dama].
ACCESSION   XP_061013043
VERSION     XP_061013043.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157060.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..622
                     /product="ATPase family gene 2 protein homolog B isoform
                     X3"
                     /calculated_mol_wt=66697
     Region          22..612
                     /region_name="CDC48"
                     /note="AAA family ATPase, CDC48 subfamily; TIGR01243"
                     /db_xref="CDD:273521"
     CDS             1..622
                     /gene="AFG2B"
                     /coded_by="XM_061157060.1:63..1931"
                     /db_xref="GeneID:133066222"
ORIGIN      
        1 mapdsgsfpe gpplkllpvd ardrgtqrcr lgptalralg ahlgsavkis lpdggsclct
       61 awprrdgadg fvqldplcts pgtavgapgf rgiinlnrfr lvpcpplrrl avwpelreqa
      121 gasgaqstaa vleavqellr nrpvsqghvv aappgapgpv aalhivsgap spnpaglvtp
      181 rthislsevp rseeepqsev tlgglseaad slrellrlpl rypralaslg levprgvlla
      241 gppgvgktql vravaretga ellavsapal qgsrpgetee nvrrifqrar elasrcptll
      301 fldevdalcp rrggphqape srvvaqvltl ldgiaedrev vvvgstnrpd aldpalrrpg
      361 rfdrevvigt ptlkqrkail qvitskmpvs gqvdlnllae mtvgyvgadl talcreaamq
      421 allhseknqd nptidetdfl eafkkiqpss lrsvigltdi kpvgweqigg ledvklklkq
      481 lefqeifnsn vmvvaatnrp dvlddallrp grldkiiyip ppdekgrlsi lkvctknmpm
      541 gpdvslekva aetcffsgad lgnlckeaal lalqenglea ttvkqehfle slktikpsls
      601 hkdltlyknl fqkkefsile di
//
LOCUS       XP_061013045              83 aa            linear   MAM 02-DEC-2023
DEFINITION  normal mucosa of esophagus-specific gene 1 protein [Dama dama].
ACCESSION   XP_061013045
VERSION     XP_061013045.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157062.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..83
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..83
                     /product="normal mucosa of esophagus-specific gene 1
                     protein"
                     /calculated_mol_wt=9504
     Region          9..76
                     /region_name="B12D"
                     /note="NADH-ubiquinone reductase complex 1 MLRQ subunit;
                     pfam06522"
                     /db_xref="CDD:461937"
     CDS             1..83
                     /gene="C12H15orf48"
                     /coded_by="XM_061157062.1:123..374"
                     /db_xref="GeneID:133066223"
ORIGIN      
        1 msffqllmkk keliplvffm avaatgasaf avyslrktdv ildrkrnpep wetvdptvpt
       61 klvtinqewk pieelqkvrr atr
//
LOCUS       XP_061013046             429 aa            linear   MAM 02-DEC-2023
DEFINITION  probable proton-coupled zinc antiporter SLC30A4 [Dama dama].
ACCESSION   XP_061013046
VERSION     XP_061013046.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157063.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..429
                     /product="probable proton-coupled zinc antiporter SLC30A4"
                     /calculated_mol_wt=47227
     Region          123..413
                     /region_name="CDF"
                     /note="cation diffusion facilitator family transporter;
                     TIGR01297"
                     /db_xref="CDD:273544"
     CDS             1..429
                     /gene="SLC30A4"
                     /coded_by="XM_061157063.1:388..1677"
                     /db_xref="GeneID:133066224"
ORIGIN      
        1 magsgawkrl ksmlrkddap lflndtsafd fsdevgdegl srfnklrvvv addgsetper
       61 pangahsalq adddslldhd lpltnsqlsl kadpcdncsk qrellkqrkv ktrltiaavl
      121 yllfmigelv ggyianslai mtdalhmltd lsaiiltlla lwlssksptk rftfgfhrle
      181 vlsamisvll vyilmgflly eavqrtihmk yeingdimli taaigvavnv imgfllnqsg
      241 hhhahshslp snspttgprc gqnqgqdsla vraafvhalg dlvqsvgvli aayiirfkpe
      301 ykiadpicty vfsllvaftt lriiwdtvvi ilegvpshln vdyikealmk iedvhsvedl
      361 niwsltsgkp taivhiqlip gssskweevq skakhlllnt fgmykctiql qsyrqevdrt
      421 cancqssss
//
LOCUS       XP_061013047             429 aa            linear   MAM 02-DEC-2023
DEFINITION  probable proton-coupled zinc antiporter SLC30A4 [Dama dama].
ACCESSION   XP_061013047
VERSION     XP_061013047.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157064.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..429
                     /product="probable proton-coupled zinc antiporter SLC30A4"
                     /calculated_mol_wt=47227
     Region          123..413
                     /region_name="CDF"
                     /note="cation diffusion facilitator family transporter;
                     TIGR01297"
                     /db_xref="CDD:273544"
     CDS             1..429
                     /gene="SLC30A4"
                     /coded_by="XM_061157064.1:269..1558"
                     /db_xref="GeneID:133066224"
ORIGIN      
        1 magsgawkrl ksmlrkddap lflndtsafd fsdevgdegl srfnklrvvv addgsetper
       61 pangahsalq adddslldhd lpltnsqlsl kadpcdncsk qrellkqrkv ktrltiaavl
      121 yllfmigelv ggyianslai mtdalhmltd lsaiiltlla lwlssksptk rftfgfhrle
      181 vlsamisvll vyilmgflly eavqrtihmk yeingdimli taaigvavnv imgfllnqsg
      241 hhhahshslp snspttgprc gqnqgqdsla vraafvhalg dlvqsvgvli aayiirfkpe
      301 ykiadpicty vfsllvaftt lriiwdtvvi ilegvpshln vdyikealmk iedvhsvedl
      361 niwsltsgkp taivhiqlip gssskweevq skakhlllnt fgmykctiql qsyrqevdrt
      421 cancqssss
//
LOCUS       XP_061013048             172 aa            linear   MAM 02-DEC-2023
DEFINITION  biogenesis of lysosome-related organelles complex 1 subunit 6 [Dama
            dama].
ACCESSION   XP_061013048
VERSION     XP_061013048.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157065.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..172
                     /product="biogenesis of lysosome-related organelles
                     complex 1 subunit 6"
                     /calculated_mol_wt=19415
     Region          50..140
                     /region_name="Snapin_Pallidin"
                     /note="Snapin/Pallidin; pfam14712"
                     /db_xref="CDD:464275"
     CDS             1..172
                     /gene="BLOC1S6"
                     /coded_by="XM_061157065.1:115..633"
                     /db_xref="GeneID:133066225"
ORIGIN      
        1 msvpgppspd gvlagppegl eagdltpgls dtspdeglie dltiedkave qlaegllshy
       61 lpdlqrskqa lqeltqnqvv lldtleqeis kfkechsmld inalfteakh yhaklvnirk
      121 emlmlhekts klkkralklq qkrqkeeler eqqrekefer ekqltakpak rt
//
LOCUS       XP_061013049             450 aa            linear   MAM 02-DEC-2023
DEFINITION  sulfide:quinone oxidoreductase, mitochondrial [Dama dama].
ACCESSION   XP_061013049
VERSION     XP_061013049.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157066.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..450
                     /product="sulfide:quinone oxidoreductase, mitochondrial"
                     /calculated_mol_wt=49688
     Region          71..389
                     /region_name="FadH2"
                     /note="NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur
                     reductase, or a related oxidoreductase [Lipid transport
                     and metabolism]; COG0446"
                     /db_xref="CDD:440215"
     CDS             1..450
                     /gene="SQOR"
                     /coded_by="XM_061157066.1:157..1509"
                     /db_xref="GeneID:133066226"
ORIGIN      
        1 mtslasvvss srarlfacfl rlgsqqaspl qlhtgaslaa kshyevlvlg ggsggitmaa
       61 rmkrkvgaen vaivepseth fyqpiwtlvg agakplsssg rptanvipsg vewikarvvd
      121 ldpdknciht dddkkisyky liialglqld yekikglpeg fahpkigsny svrtvektwk
      181 alqdfkegna iftfpntpvk cagapqkimy lseayfrktg krpkaniifn tslgaifgvk
      241 kyadalqkii qertitvnyk qnlievradk qeavfenldk pgetqvisye mlhvtppmsp
      301 pdvlktspva daagwvdvdr dtlqhkrypn vfgigdctnl ptsktaaava aqsgvldrti
      361 slimknqtpv kkydgytscp lvtgynrvil aefnynaepl etfpfdqske rlsmylmkad
      421 mmpflywnlm lrgywggpaf lrklfhlgks
//
LOCUS       XP_061013050             450 aa            linear   MAM 02-DEC-2023
DEFINITION  sulfide:quinone oxidoreductase, mitochondrial [Dama dama].
ACCESSION   XP_061013050
VERSION     XP_061013050.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157067.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..450
                     /product="sulfide:quinone oxidoreductase, mitochondrial"
                     /calculated_mol_wt=49688
     Region          71..389
                     /region_name="FadH2"
                     /note="NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur
                     reductase, or a related oxidoreductase [Lipid transport
                     and metabolism]; COG0446"
                     /db_xref="CDD:440215"
     CDS             1..450
                     /gene="SQOR"
                     /coded_by="XM_061157067.1:37..1389"
                     /db_xref="GeneID:133066226"
ORIGIN      
        1 mtslasvvss srarlfacfl rlgsqqaspl qlhtgaslaa kshyevlvlg ggsggitmaa
       61 rmkrkvgaen vaivepseth fyqpiwtlvg agakplsssg rptanvipsg vewikarvvd
      121 ldpdknciht dddkkisyky liialglqld yekikglpeg fahpkigsny svrtvektwk
      181 alqdfkegna iftfpntpvk cagapqkimy lseayfrktg krpkaniifn tslgaifgvk
      241 kyadalqkii qertitvnyk qnlievradk qeavfenldk pgetqvisye mlhvtppmsp
      301 pdvlktspva daagwvdvdr dtlqhkrypn vfgigdctnl ptsktaaava aqsgvldrti
      361 slimknqtpv kkydgytscp lvtgynrvil aefnynaepl etfpfdqske rlsmylmkad
      421 mmpflywnlm lrgywggpaf lrklfhlgks
//
LOCUS       XP_061013051            1073 aa            linear   MAM 02-DEC-2023
DEFINITION  semaphorin-6D isoform X1 [Dama dama].
ACCESSION   XP_061013051
VERSION     XP_061013051.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157068.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1073
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1073
                     /product="semaphorin-6D isoform X1"
                     /calculated_mol_wt=119591
     Region          49..513
                     /region_name="Sema_6D"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorin 6D (Sema6D); cd11269"
                     /db_xref="CDD:200530"
     Site            order(109..112,163..164,189,191..192,199,213..215,220,
                     267..268,271,394)
                     /site_type="other"
                     /note="plexin binding site [polypeptide binding]"
                     /db_xref="CDD:200530"
     Site            order(244,286,288,290..292,294,318,320..324,353,415..416,
                     418)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:200530"
     Region          514..569
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     Region          <903..>1062
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     CDS             1..1073
                     /gene="SEMA6D"
                     /coded_by="XM_061157068.1:364..3585"
                     /db_xref="GeneID:133066228"
ORIGIN      
        1 mrfflpcaym llllisqlra vsfpeddepl ntvdyhysrq ypvfrgrpsg nesqhrldfq
       61 lmlkirdtly iagrdqvytv nlneipktev ipnkkltwrs rqqdrencam kgkhkdechn
      121 fikvfvprnd emvfvcgtna fnpmcryykl ntleydgeei sglarcpfda rqtnvalfad
      181 gklysatvad flasdaviyr smgdgsalrt ikydskwike phflhaieyg nyvyfffrei
      241 avehnnlgka vysrvarick ndmggsqrvl ekhwtsflka rlncsvpgds ffyfdvlqsi
      301 tdiiqingip tvvgvfttql nsipgsavca fsmddiekvf kgrfkeqktp dsvwtavped
      361 kvpkprpgcc akhglaeayk tsidfpdetl sfikshplmd savppiadep wftktriryr
      421 ltaiaidhsa gphqnytvif vgseagvvlk vlaktspfsl ndsvlleeie aynhakcnae
      481 needrkvisl qldkdhhaly vafsscviri plsrcerygs ckksciasrd pycgwlsqga
      541 cgrvspamlt ggfeqdteyg ntahlgdche ilptsatpdy kifggptsdm evssssvttm
      601 asipeitpkv idtwrpklts srkfvvqddp ntsdftdpfs gipkgvrwev qsgesnqmvh
      661 mnvlitcvfa afvlgafiag vavycyrdmf vrknrkihkd aesaqsctds sgsfaklngl
      721 fdspvkeyqq nidspklysn lltsrkelpp ngdtksmvmd hrgqppelaa lptpestpvl
      781 hqktlqamks hsekahghga srketpqffp ssppphspls hghipsaivl pnathdynts
      841 fsnsnahkae kklqnidhpl tkssskrdhr rsvdsrntln dllkhlndpn snpkaimgdi
      901 qmahqtlmld pvgpmsevpp kvpnreasly sppstlprns ptkrvdvptt pgvpmtsler
      961 qrgyhknssq rhsisampkn lsspngvlls rqpsmnrggy mptpagakvd yiqgapvsvh
     1021 lqpslsrqss ytsngtlprt glkrtpslkp dvppkpsfvp qttsvrplnk yty
//
LOCUS       XP_061013052            1073 aa            linear   MAM 02-DEC-2023
DEFINITION  semaphorin-6D isoform X1 [Dama dama].
ACCESSION   XP_061013052
VERSION     XP_061013052.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157069.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1073
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1073
                     /product="semaphorin-6D isoform X1"
                     /calculated_mol_wt=119591
     Region          49..513
                     /region_name="Sema_6D"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorin 6D (Sema6D); cd11269"
                     /db_xref="CDD:200530"
     Site            order(109..112,163..164,189,191..192,199,213..215,220,
                     267..268,271,394)
                     /site_type="other"
                     /note="plexin binding site [polypeptide binding]"
                     /db_xref="CDD:200530"
     Site            order(244,286,288,290..292,294,318,320..324,353,415..416,
                     418)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:200530"
     Region          514..569
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     Region          <903..>1062
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     CDS             1..1073
                     /gene="SEMA6D"
                     /coded_by="XM_061157069.1:557..3778"
                     /db_xref="GeneID:133066228"
ORIGIN      
        1 mrfflpcaym llllisqlra vsfpeddepl ntvdyhysrq ypvfrgrpsg nesqhrldfq
       61 lmlkirdtly iagrdqvytv nlneipktev ipnkkltwrs rqqdrencam kgkhkdechn
      121 fikvfvprnd emvfvcgtna fnpmcryykl ntleydgeei sglarcpfda rqtnvalfad
      181 gklysatvad flasdaviyr smgdgsalrt ikydskwike phflhaieyg nyvyfffrei
      241 avehnnlgka vysrvarick ndmggsqrvl ekhwtsflka rlncsvpgds ffyfdvlqsi
      301 tdiiqingip tvvgvfttql nsipgsavca fsmddiekvf kgrfkeqktp dsvwtavped
      361 kvpkprpgcc akhglaeayk tsidfpdetl sfikshplmd savppiadep wftktriryr
      421 ltaiaidhsa gphqnytvif vgseagvvlk vlaktspfsl ndsvlleeie aynhakcnae
      481 needrkvisl qldkdhhaly vafsscviri plsrcerygs ckksciasrd pycgwlsqga
      541 cgrvspamlt ggfeqdteyg ntahlgdche ilptsatpdy kifggptsdm evssssvttm
      601 asipeitpkv idtwrpklts srkfvvqddp ntsdftdpfs gipkgvrwev qsgesnqmvh
      661 mnvlitcvfa afvlgafiag vavycyrdmf vrknrkihkd aesaqsctds sgsfaklngl
      721 fdspvkeyqq nidspklysn lltsrkelpp ngdtksmvmd hrgqppelaa lptpestpvl
      781 hqktlqamks hsekahghga srketpqffp ssppphspls hghipsaivl pnathdynts
      841 fsnsnahkae kklqnidhpl tkssskrdhr rsvdsrntln dllkhlndpn snpkaimgdi
      901 qmahqtlmld pvgpmsevpp kvpnreasly sppstlprns ptkrvdvptt pgvpmtsler
      961 qrgyhknssq rhsisampkn lsspngvlls rqpsmnrggy mptpagakvd yiqgapvsvh
     1021 lqpslsrqss ytsngtlprt glkrtpslkp dvppkpsfvp qttsvrplnk yty
//
LOCUS       XP_061013053            1073 aa            linear   MAM 02-DEC-2023
DEFINITION  semaphorin-6D isoform X1 [Dama dama].
ACCESSION   XP_061013053
VERSION     XP_061013053.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157070.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1073
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1073
                     /product="semaphorin-6D isoform X1"
                     /calculated_mol_wt=119591
     Region          49..513
                     /region_name="Sema_6D"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorin 6D (Sema6D); cd11269"
                     /db_xref="CDD:200530"
     Site            order(109..112,163..164,189,191..192,199,213..215,220,
                     267..268,271,394)
                     /site_type="other"
                     /note="plexin binding site [polypeptide binding]"
                     /db_xref="CDD:200530"
     Site            order(244,286,288,290..292,294,318,320..324,353,415..416,
                     418)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:200530"
     Region          514..569
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     Region          <903..>1062
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     CDS             1..1073
                     /gene="SEMA6D"
                     /coded_by="XM_061157070.1:414..3635"
                     /db_xref="GeneID:133066228"
ORIGIN      
        1 mrfflpcaym llllisqlra vsfpeddepl ntvdyhysrq ypvfrgrpsg nesqhrldfq
       61 lmlkirdtly iagrdqvytv nlneipktev ipnkkltwrs rqqdrencam kgkhkdechn
      121 fikvfvprnd emvfvcgtna fnpmcryykl ntleydgeei sglarcpfda rqtnvalfad
      181 gklysatvad flasdaviyr smgdgsalrt ikydskwike phflhaieyg nyvyfffrei
      241 avehnnlgka vysrvarick ndmggsqrvl ekhwtsflka rlncsvpgds ffyfdvlqsi
      301 tdiiqingip tvvgvfttql nsipgsavca fsmddiekvf kgrfkeqktp dsvwtavped
      361 kvpkprpgcc akhglaeayk tsidfpdetl sfikshplmd savppiadep wftktriryr
      421 ltaiaidhsa gphqnytvif vgseagvvlk vlaktspfsl ndsvlleeie aynhakcnae
      481 needrkvisl qldkdhhaly vafsscviri plsrcerygs ckksciasrd pycgwlsqga
      541 cgrvspamlt ggfeqdteyg ntahlgdche ilptsatpdy kifggptsdm evssssvttm
      601 asipeitpkv idtwrpklts srkfvvqddp ntsdftdpfs gipkgvrwev qsgesnqmvh
      661 mnvlitcvfa afvlgafiag vavycyrdmf vrknrkihkd aesaqsctds sgsfaklngl
      721 fdspvkeyqq nidspklysn lltsrkelpp ngdtksmvmd hrgqppelaa lptpestpvl
      781 hqktlqamks hsekahghga srketpqffp ssppphspls hghipsaivl pnathdynts
      841 fsnsnahkae kklqnidhpl tkssskrdhr rsvdsrntln dllkhlndpn snpkaimgdi
      901 qmahqtlmld pvgpmsevpp kvpnreasly sppstlprns ptkrvdvptt pgvpmtsler
      961 qrgyhknssq rhsisampkn lsspngvlls rqpsmnrggy mptpagakvd yiqgapvsvh
     1021 lqpslsrqss ytsngtlprt glkrtpslkp dvppkpsfvp qttsvrplnk yty
//
LOCUS       XP_061013054            1073 aa            linear   MAM 02-DEC-2023
DEFINITION  semaphorin-6D isoform X1 [Dama dama].
ACCESSION   XP_061013054
VERSION     XP_061013054.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157071.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1073
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1073
                     /product="semaphorin-6D isoform X1"
                     /calculated_mol_wt=119591
     Region          49..513
                     /region_name="Sema_6D"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorin 6D (Sema6D); cd11269"
                     /db_xref="CDD:200530"
     Site            order(109..112,163..164,189,191..192,199,213..215,220,
                     267..268,271,394)
                     /site_type="other"
                     /note="plexin binding site [polypeptide binding]"
                     /db_xref="CDD:200530"
     Site            order(244,286,288,290..292,294,318,320..324,353,415..416,
                     418)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:200530"
     Region          514..569
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     Region          <903..>1062
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     CDS             1..1073
                     /gene="SEMA6D"
                     /coded_by="XM_061157071.1:453..3674"
                     /db_xref="GeneID:133066228"
ORIGIN      
        1 mrfflpcaym llllisqlra vsfpeddepl ntvdyhysrq ypvfrgrpsg nesqhrldfq
       61 lmlkirdtly iagrdqvytv nlneipktev ipnkkltwrs rqqdrencam kgkhkdechn
      121 fikvfvprnd emvfvcgtna fnpmcryykl ntleydgeei sglarcpfda rqtnvalfad
      181 gklysatvad flasdaviyr smgdgsalrt ikydskwike phflhaieyg nyvyfffrei
      241 avehnnlgka vysrvarick ndmggsqrvl ekhwtsflka rlncsvpgds ffyfdvlqsi
      301 tdiiqingip tvvgvfttql nsipgsavca fsmddiekvf kgrfkeqktp dsvwtavped
      361 kvpkprpgcc akhglaeayk tsidfpdetl sfikshplmd savppiadep wftktriryr
      421 ltaiaidhsa gphqnytvif vgseagvvlk vlaktspfsl ndsvlleeie aynhakcnae
      481 needrkvisl qldkdhhaly vafsscviri plsrcerygs ckksciasrd pycgwlsqga
      541 cgrvspamlt ggfeqdteyg ntahlgdche ilptsatpdy kifggptsdm evssssvttm
      601 asipeitpkv idtwrpklts srkfvvqddp ntsdftdpfs gipkgvrwev qsgesnqmvh
      661 mnvlitcvfa afvlgafiag vavycyrdmf vrknrkihkd aesaqsctds sgsfaklngl
      721 fdspvkeyqq nidspklysn lltsrkelpp ngdtksmvmd hrgqppelaa lptpestpvl
      781 hqktlqamks hsekahghga srketpqffp ssppphspls hghipsaivl pnathdynts
      841 fsnsnahkae kklqnidhpl tkssskrdhr rsvdsrntln dllkhlndpn snpkaimgdi
      901 qmahqtlmld pvgpmsevpp kvpnreasly sppstlprns ptkrvdvptt pgvpmtsler
      961 qrgyhknssq rhsisampkn lsspngvlls rqpsmnrggy mptpagakvd yiqgapvsvh
     1021 lqpslsrqss ytsngtlprt glkrtpslkp dvppkpsfvp qttsvrplnk yty
//
LOCUS       XP_061013055            1069 aa            linear   MAM 02-DEC-2023
DEFINITION  semaphorin-6D isoform X2 [Dama dama].
ACCESSION   XP_061013055
VERSION     XP_061013055.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157072.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1069
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1069
                     /product="semaphorin-6D isoform X2"
                     /calculated_mol_wt=119196
     Region          49..513
                     /region_name="Sema_6D"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorin 6D (Sema6D); cd11269"
                     /db_xref="CDD:200530"
     Site            order(109..112,163..164,189,191..192,199,213..215,220,
                     267..268,271,394)
                     /site_type="other"
                     /note="plexin binding site [polypeptide binding]"
                     /db_xref="CDD:200530"
     Site            order(244,286,288,290..292,294,318,320..324,353,415..416,
                     418)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:200530"
     Region          514..569
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     Region          <899..>1058
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     CDS             1..1069
                     /gene="SEMA6D"
                     /coded_by="XM_061157072.1:364..3573"
                     /db_xref="GeneID:133066228"
ORIGIN      
        1 mrfflpcaym llllisqlra vsfpeddepl ntvdyhysrq ypvfrgrpsg nesqhrldfq
       61 lmlkirdtly iagrdqvytv nlneipktev ipnkkltwrs rqqdrencam kgkhkdechn
      121 fikvfvprnd emvfvcgtna fnpmcryykl ntleydgeei sglarcpfda rqtnvalfad
      181 gklysatvad flasdaviyr smgdgsalrt ikydskwike phflhaieyg nyvyfffrei
      241 avehnnlgka vysrvarick ndmggsqrvl ekhwtsflka rlncsvpgds ffyfdvlqsi
      301 tdiiqingip tvvgvfttql nsipgsavca fsmddiekvf kgrfkeqktp dsvwtavped
      361 kvpkprpgcc akhglaeayk tsidfpdetl sfikshplmd savppiadep wftktriryr
      421 ltaiaidhsa gphqnytvif vgseagvvlk vlaktspfsl ndsvlleeie aynhakcnae
      481 needrkvisl qldkdhhaly vafsscviri plsrcerygs ckksciasrd pycgwlsqga
      541 cgrvspamlt ggfeqdteyg ntahlgdche ilptsatpdy kifggptsdm evssssvttm
      601 asipeitpkv idtwrpklts srkfvvqddp ntsdftdpfs gvrwevqsge snqmvhmnvl
      661 itcvfaafvl gafiagvavy cyrdmfvrkn rkihkdaesa qsctdssgsf aklnglfdsp
      721 vkeyqqnids pklysnllts rkelppngdt ksmvmdhrgq ppelaalptp estpvlhqkt
      781 lqamkshsek ahghgasrke tpqffpsspp phsplshghi psaivlpnat hdyntsfsns
      841 nahkaekklq nidhpltkss skrdhrrsvd srntlndllk hlndpnsnpk aimgdiqmah
      901 qtlmldpvgp msevppkvpn reaslyspps tlprnsptkr vdvpttpgvp mtslerqrgy
      961 hknssqrhsi sampknlssp ngvllsrqps mnrggymptp agakvdyiqg apvsvhlqps
     1021 lsrqssytsn gtlprtglkr tpslkpdvpp kpsfvpqtts vrplnkyty
//
LOCUS       XP_061013056            1054 aa            linear   MAM 02-DEC-2023
DEFINITION  semaphorin-6D isoform X3 [Dama dama].
ACCESSION   XP_061013056
VERSION     XP_061013056.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157073.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1054
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1054
                     /product="semaphorin-6D isoform X3"
                     /calculated_mol_wt=117615
     Region          49..513
                     /region_name="Sema_6D"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorin 6D (Sema6D); cd11269"
                     /db_xref="CDD:200530"
     Site            order(109..112,163..164,189,191..192,199,213..215,220,
                     267..268,271,394)
                     /site_type="other"
                     /note="plexin binding site [polypeptide binding]"
                     /db_xref="CDD:200530"
     Site            order(244,286,288,290..292,294,318,320..324,353,415..416,
                     418)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:200530"
     Region          514..569
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     Region          <884..>1043
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     CDS             1..1054
                     /gene="SEMA6D"
                     /coded_by="XM_061157073.1:365..3529"
                     /db_xref="GeneID:133066228"
ORIGIN      
        1 mrfflpcaym llllisqlra vsfpeddepl ntvdyhysrq ypvfrgrpsg nesqhrldfq
       61 lmlkirdtly iagrdqvytv nlneipktev ipnkkltwrs rqqdrencam kgkhkdechn
      121 fikvfvprnd emvfvcgtna fnpmcryykl ntleydgeei sglarcpfda rqtnvalfad
      181 gklysatvad flasdaviyr smgdgsalrt ikydskwike phflhaieyg nyvyfffrei
      241 avehnnlgka vysrvarick ndmggsqrvl ekhwtsflka rlncsvpgds ffyfdvlqsi
      301 tdiiqingip tvvgvfttql nsipgsavca fsmddiekvf kgrfkeqktp dsvwtavped
      361 kvpkprpgcc akhglaeayk tsidfpdetl sfikshplmd savppiadep wftktriryr
      421 ltaiaidhsa gphqnytvif vgseagvvlk vlaktspfsl ndsvlleeie aynhakcnae
      481 needrkvisl qldkdhhaly vafsscviri plsrcerygs ckksciasrd pycgwlsqga
      541 cgrvspamlt ggfeqdteyg ntahlgdchd mevssssvtt masipeitpk vidtwrpklt
      601 ssrkfvvqdd pntsdftdpf sgipkgvrwe vqsgesnqmv hmnvlitcvf aafvlgafia
      661 gvavycyrdm fvrknrkihk daesaqsctd ssgsfaklng lfdspvkeyq qnidspklys
      721 nlltsrkelp pngdtksmvm dhrgqppela alptpestpv lhqktlqamk shsekahghg
      781 asrketpqff pssppphspl shghipsaiv lpnathdynt sfsnsnahka ekklqnidhp
      841 ltkssskrdh rrsvdsrntl ndllkhlndp nsnpkaimgd iqmahqtlml dpvgpmsevp
      901 pkvpnreasl ysppstlprn sptkrvdvpt tpgvpmtsle rqrgyhknss qrhsisampk
      961 nlsspngvll srqpsmnrgg ymptpagakv dyiqgapvsv hlqpslsrqs sytsngtlpr
     1021 tglkrtpslk pdvppkpsfv pqttsvrpln kyty
//
LOCUS       XP_061013057            1017 aa            linear   MAM 02-DEC-2023
DEFINITION  semaphorin-6D isoform X4 [Dama dama].
ACCESSION   XP_061013057
VERSION     XP_061013057.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157074.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1017
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1017
                     /product="semaphorin-6D isoform X4"
                     /calculated_mol_wt=113422
     Region          49..513
                     /region_name="Sema_6D"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorin 6D (Sema6D); cd11269"
                     /db_xref="CDD:200530"
     Site            order(109..112,163..164,189,191..192,199,213..215,220,
                     267..268,271,394)
                     /site_type="other"
                     /note="plexin binding site [polypeptide binding]"
                     /db_xref="CDD:200530"
     Site            order(244,286,288,290..292,294,318,320..324,353,415..416,
                     418)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:200530"
     Region          514..569
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     Region          <847..>1006
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     CDS             1..1017
                     /gene="SEMA6D"
                     /coded_by="XM_061157074.1:364..3417"
                     /db_xref="GeneID:133066228"
ORIGIN      
        1 mrfflpcaym llllisqlra vsfpeddepl ntvdyhysrq ypvfrgrpsg nesqhrldfq
       61 lmlkirdtly iagrdqvytv nlneipktev ipnkkltwrs rqqdrencam kgkhkdechn
      121 fikvfvprnd emvfvcgtna fnpmcryykl ntleydgeei sglarcpfda rqtnvalfad
      181 gklysatvad flasdaviyr smgdgsalrt ikydskwike phflhaieyg nyvyfffrei
      241 avehnnlgka vysrvarick ndmggsqrvl ekhwtsflka rlncsvpgds ffyfdvlqsi
      301 tdiiqingip tvvgvfttql nsipgsavca fsmddiekvf kgrfkeqktp dsvwtavped
      361 kvpkprpgcc akhglaeayk tsidfpdetl sfikshplmd savppiadep wftktriryr
      421 ltaiaidhsa gphqnytvif vgseagvvlk vlaktspfsl ndsvlleeie aynhakcnae
      481 needrkvisl qldkdhhaly vafsscviri plsrcerygs ckksciasrd pycgwlsqga
      541 cgrvspamlt ggfeqdteyg ntahlgdche ilptsatpdy kifggptsgv rwevqsgesn
      601 qmvhmnvlit cvfaafvlga fiagvavycy rdmfvrknrk ihkdaesaqs ctdssgsfak
      661 lnglfdspvk eyqqnidspk lysnlltsrk elppngdtks mvmdhrgqpp elaalptpes
      721 tpvlhqktlq amkshsekah ghgasrketp qffpssppph splshghips aivlpnathd
      781 yntsfsnsna hkaekklqni dhpltksssk rdhrrsvdsr ntlndllkhl ndpnsnpkai
      841 mgdiqmahqt lmldpvgpms evppkvpnre aslysppstl prnsptkrvd vpttpgvpmt
      901 slerqrgyhk nssqrhsisa mpknlsspng vllsrqpsmn rggymptpag akvdyiqgap
      961 vsvhlqpsls rqssytsngt lprtglkrtp slkpdvppkp sfvpqttsvr plnkyty
//
LOCUS       XP_061013058             998 aa            linear   MAM 02-DEC-2023
DEFINITION  semaphorin-6D isoform X5 [Dama dama].
ACCESSION   XP_061013058
VERSION     XP_061013058.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157075.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..998
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..998
                     /product="semaphorin-6D isoform X5"
                     /calculated_mol_wt=111445
     Region          49..513
                     /region_name="Sema_6D"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorin 6D (Sema6D); cd11269"
                     /db_xref="CDD:200530"
     Site            order(109..112,163..164,189,191..192,199,213..215,220,
                     267..268,271,394)
                     /site_type="other"
                     /note="plexin binding site [polypeptide binding]"
                     /db_xref="CDD:200530"
     Site            order(244,286,288,290..292,294,318,320..324,353,415..416,
                     418)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:200530"
     Region          514..569
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     Region          <828..>987
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     CDS             1..998
                     /gene="SEMA6D"
                     /coded_by="XM_061157075.1:364..3360"
                     /db_xref="GeneID:133066228"
ORIGIN      
        1 mrfflpcaym llllisqlra vsfpeddepl ntvdyhysrq ypvfrgrpsg nesqhrldfq
       61 lmlkirdtly iagrdqvytv nlneipktev ipnkkltwrs rqqdrencam kgkhkdechn
      121 fikvfvprnd emvfvcgtna fnpmcryykl ntleydgeei sglarcpfda rqtnvalfad
      181 gklysatvad flasdaviyr smgdgsalrt ikydskwike phflhaieyg nyvyfffrei
      241 avehnnlgka vysrvarick ndmggsqrvl ekhwtsflka rlncsvpgds ffyfdvlqsi
      301 tdiiqingip tvvgvfttql nsipgsavca fsmddiekvf kgrfkeqktp dsvwtavped
      361 kvpkprpgcc akhglaeayk tsidfpdetl sfikshplmd savppiadep wftktriryr
      421 ltaiaidhsa gphqnytvif vgseagvvlk vlaktspfsl ndsvlleeie aynhakcnae
      481 needrkvisl qldkdhhaly vafsscviri plsrcerygs ckksciasrd pycgwlsqga
      541 cgrvspamlt ggfeqdteyg ntahlgdchg vrwevqsges nqmvhmnvli tcvfaafvlg
      601 afiagvavyc yrdmfvrknr kihkdaesaq sctdssgsfa klnglfdspv keyqqnidsp
      661 klysnlltsr kelppngdtk smvmdhrgqp pelaalptpe stpvlhqktl qamkshseka
      721 hghgasrket pqffpssppp hsplshghip saivlpnath dyntsfsnsn ahkaekklqn
      781 idhpltksss krdhrrsvds rntlndllkh lndpnsnpka imgdiqmahq tlmldpvgpm
      841 sevppkvpnr easlysppst lprnsptkrv dvpttpgvpm tslerqrgyh knssqrhsis
      901 ampknlsspn gvllsrqpsm nrggymptpa gakvdyiqga pvsvhlqpsl srqssytsng
      961 tlprtglkrt pslkpdvppk psfvpqttsv rplnkyty
//
LOCUS       XP_061013059             476 aa            linear   MAM 02-DEC-2023
DEFINITION  semaphorin-6D isoform X6 [Dama dama].
ACCESSION   XP_061013059
VERSION     XP_061013059.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157076.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..476
                     /product="semaphorin-6D isoform X6"
                     /calculated_mol_wt=54067
     Region          49..476
                     /region_name="Sema"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorins and plexins; cl15693"
                     /db_xref="CDD:472829"
     CDS             1..476
                     /gene="SEMA6D"
                     /coded_by="XM_061157076.1:365..1795"
                     /db_xref="GeneID:133066228"
ORIGIN      
        1 mrfflpcaym llllisqlra vsfpeddepl ntvdyhysrq ypvfrgrpsg nesqhrldfq
       61 lmlkirdtly iagrdqvytv nlneipktev ipnkkltwrs rqqdrencam kgkhkdechn
      121 fikvfvprnd emvfvcgtna fnpmcryykl ntleydgeei sglarcpfda rqtnvalfad
      181 gklysatvad flasdaviyr smgdgsalrt ikydskwike phflhaieyg nyvyfffrei
      241 avehnnlgka vysrvarick ndmggsqrvl ekhwtsflka rlncsvpgds ffyfdvlqsi
      301 tdiiqingip tvvgvfttql nsipgsavca fsmddiekvf kgrfkeqktp dsvwtavped
      361 kvpkprpgcc akhglaeayk tsidfpdetl sfikshplmd savppiadep wftktriryr
      421 ltaiaidhsa gphqnytvif vgseagvvlk vlaktspfsl ndsvlleeie aynhak
//
LOCUS       XP_061013060             600 aa            linear   MAM 02-DEC-2023
DEFINITION  myelin expression factor 2 isoform X1 [Dama dama].
ACCESSION   XP_061013060
VERSION     XP_061013060.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157077.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..600
                     /product="myelin expression factor 2 isoform X1"
                     /calculated_mol_wt=64367
     Region          101..176
                     /region_name="RRM1_MYEF2"
                     /note="RNA recognition motif 1 (RRM1) found in vertebrate
                     myelin expression factor 2 (MEF-2); cd12658"
                     /db_xref="CDD:410059"
     Region          124..>596
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     Region          233..308
                     /region_name="RRM2_MYEF2"
                     /note="RNA recognition motif 2 (RRM2) found in vertebrate
                     myelin expression factor 2 (MEF-2); cd12660"
                     /db_xref="CDD:410061"
     Region          524..600
                     /region_name="RRM3_MYEF2"
                     /note="RNA recognition motif 3 (RRM3) found in vertebrate
                     myelin expression factor 2 (MEF-2); cd12662"
                     /db_xref="CDD:410063"
     CDS             1..600
                     /gene="MYEF2"
                     /coded_by="XM_061157077.1:100..1902"
                     /db_xref="GeneID:133066230"
ORIGIN      
        1 madadkpevl raagddsphr qpseppgepr rephppeqek qppqhssssn gvkiendesv
       61 keekselkek stgnkkanrf hpyskdknsg tgekkgpnrn rvfisnipyd mkwqaikdlm
      121 rekvgevtyv elfkdaegks rgcgvvefkd eefvkkalet mnkydlsgrp lnikedpdge
      181 narralqrtg gsfpgghvpd mgsglmnlpp silnnpnipp evisnlqagr lgstifvanl
      241 dfkvgwkklk evfsiagtvk radikedkdg ksrgmgtvtf eqaieavqai smfngqflfd
      301 rpmhvkmddk svphedyrsh dsktpqlprg lggigmglgp ggqpisasql niggvmgnlg
      361 psgmgmdgpg fggmnriggg igfggleamn smggfggvgr mgelyrgamt ssmerdfgrg
      421 diginrgfgd sfgrlgsami ggfagrigas nmgpvgsgis ggmggmnsvt ggmgmgldrm
      481 sssfdrmgpg igailersid mdrgflsgpm gsgmrdrigs kgnqifvrnl pfdltwqklk
      541 ekfsqcghvm faeikmengk skgcgtvrfd spesaekacr imngikisgr eidvrldrna
//
LOCUS       XP_061013061             576 aa            linear   MAM 02-DEC-2023
DEFINITION  myelin expression factor 2 isoform X2 [Dama dama].
ACCESSION   XP_061013061
VERSION     XP_061013061.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157078.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..576
                     /product="myelin expression factor 2 isoform X2"
                     /calculated_mol_wt=62191
     Region          101..176
                     /region_name="RRM1_MYEF2"
                     /note="RNA recognition motif 1 (RRM1) found in vertebrate
                     myelin expression factor 2 (MEF-2); cd12658"
                     /db_xref="CDD:410059"
     Region          233..308
                     /region_name="RRM2_MYEF2"
                     /note="RNA recognition motif 2 (RRM2) found in vertebrate
                     myelin expression factor 2 (MEF-2); cd12660"
                     /db_xref="CDD:410061"
     Region          500..576
                     /region_name="RRM3_MYEF2"
                     /note="RNA recognition motif 3 (RRM3) found in vertebrate
                     myelin expression factor 2 (MEF-2); cd12662"
                     /db_xref="CDD:410063"
     CDS             1..576
                     /gene="MYEF2"
                     /coded_by="XM_061157078.1:99..1829"
                     /db_xref="GeneID:133066230"
ORIGIN      
        1 madadkpevl raagddsphr qpseppgepr rephppeqek qppqhssssn gvkiendesv
       61 keekselkek stgnkkanrf hpyskdknsg tgekkgpnrn rvfisnipyd mkwqaikdlm
      121 rekvgevtyv elfkdaegks rgcgvvefkd eefvkkalet mnkydlsgrp lnikedpdge
      181 narralqrtg gsfpgghvpd mgsglmnlpp silnnpnipp evisnlqagr lgstifvanl
      241 dfkvgwkklk evfsiagtvk radikedkdg ksrgmgtvtf eqaieavqai smfngqflfd
      301 rpmhvkmddk svphedyrsh dsktpqlprg lggigmglgp ggqpisasql niggvmgnlg
      361 psgmgmdgpg fggmnriggg igfggleamn smggfggvgr mgelyrgamt ssmerdfgrg
      421 diginrgfgd sfgrlgggmg gmnsvtggmg mgldrmsssf drmgpgigai lersidmdrg
      481 flsgpmgsgm rdrigskgnq ifvrnlpfdl twqklkekfs qcghvmfaei kmengkskgc
      541 gtvrfdspes aekacrimng ikisgreidv rldrna
//
LOCUS       XP_061013062             477 aa            linear   MAM 02-DEC-2023
DEFINITION  sodium/potassium/calcium exchanger 5 [Dama dama].
ACCESSION   XP_061013062
VERSION     XP_061013062.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157079.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..477
                     /product="sodium/potassium/calcium exchanger 5"
                     /calculated_mol_wt=52729
     Region          <26..>200
                     /region_name="2A1904"
                     /note="K+-dependent Na+/Ca+ exchanger; TIGR00927"
                     /db_xref="CDD:273344"
     Region          <267..467
                     /region_name="2A1904"
                     /note="K+-dependent Na+/Ca+ exchanger; TIGR00927"
                     /db_xref="CDD:273344"
     CDS             1..477
                     /gene="SLC24A5"
                     /coded_by="XM_061157079.1:2..1435"
                     /db_xref="GeneID:133066231"
ORIGIN      
        1 mrdsnilqif tsfslpgnst qcvispssef pegfftkqer adggiiiyfl iilymfmavs
       61 ivcseyflps leiiseyfgl sqdvagatfm aagssapelv taflgvfitk gdigistilg
      121 saiynllgic aacgllsnav stlscwplfr dcaayaisia allaiifdnq vywyegtlll
      181 liyglyvvvl cfdikinqyi ikkcspcctc lakaieerre qqplmgwede dqpfirrqsr
      241 tdsgifheds gysqlslslh glsqvcedpp svfnmpeadl krifwvlslp iiillflttp
      301 dcrrkfwrky fvitffmsal wisaftyilv wmvtitgetl eipdtvmglt llaagtsipd
      361 tiasvlvvrk gkgdmamsni vgsnvfdmlc lgvpwfikta finasapiev nsrgltyiti
      421 flnisivflf lavhlngwkl drklgvvcll lylglttlsv lyelgiignn kirgcgd
//
LOCUS       XP_061013063            1096 aa            linear   MAM 02-DEC-2023
DEFINITION  solute carrier family 12 member 1 isoform X1 [Dama dama].
ACCESSION   XP_061013063
VERSION     XP_061013063.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157080.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1096
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1096
                     /product="solute carrier family 12 member 1 isoform X1"
                     /calculated_mol_wt=120448
     Region          101..1096
                     /region_name="2a30"
                     /note="K-Cl cotransporter; TIGR00930"
                     /db_xref="CDD:273347"
     CDS             1..1096
                     /gene="SLC12A1"
                     /coded_by="XM_061157080.1:1..3291"
                     /db_xref="GeneID:133066232"
ORIGIN      
        1 mslnnssnvf ldptpsntnr fqvnvvness aavndnadpp hyeetsfgde gqnrfrisfr
       61 pgnqecydnf lqtgetaktd asfhaydsht ntyylqtfgh ntvdavpkie yyrntgsvsg
      121 pkvnrpslld iheqlaknvs vapgsadvva ngegtpgdeq aenkvedqag avkfgwvkgv
      181 lvrcmlniwg vmlfirlswi vgeagiglgv iiiglsvvvt tltgismsai ctngvvrggg
      241 ayylisrslg pefggsigli fafanavava myvvgfaetv vdllkesdsm mvdptndiri
      301 igsitvvill gisvagmewe akaqvillii lliaianffi gtvipsnnek rargffnyqa
      361 sifaenfgps ftkgegffsv faiffpaatg ilaganisgd ledpqdaipk gtmlaifitt
      421 vayigvaicv gacvvrdatg svndtivsgv scngsaacgl gydfsrcqre pcqyglmnnf
      481 qvmsmvsgfg plitagifsa tlssalaslv sapkvfqalc kdniykalqf fakgygknne
      541 plrgyfltfv iamafiliae lntiapiisn fflasyalin fscfhasyak spgwrpaygi
      601 ynmwvslfga vlccavmfvi nwwaavityv iefflyiyvt ykkpdvnwgs stqalsyvsa
      661 ldnalelttv edhvknfrpq civltggpmt rpallditha ftknsglcic cevfvgprkl
      721 cvkemnsgma kkqawliknk ikafyaavaa dcfrdgvrsl lqasglgrmk pntlvigykk
      781 nwrkapltei enyvgiihda fdfeigvviv risqgfdisq vlqvqdelek leqerlalea
      841 tikdneseeg nggirglfkk agklnitkpt pkkdsginti qsmhvgefnq klveastqfk
      901 kkqgkgtidv wwlfddgglt llipyiltlr kkwkdcklri yvggkinrie eekiamasll
      961 skfrikfadi hvigdinikp nkeswkvfee miepyrlhes ckdlttaekl kretpwkitd
     1021 aeleavkeks yrqvrlnell qehsraanli vlslpvarkg sisdwlymaw leiltknlpp
     1081 vllvrgnhkn vltfys
//
LOCUS       XP_061013064            1096 aa            linear   MAM 02-DEC-2023
DEFINITION  solute carrier family 12 member 1 isoform X2 [Dama dama].
ACCESSION   XP_061013064
VERSION     XP_061013064.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157081.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1096
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1096
                     /product="solute carrier family 12 member 1 isoform X2"
                     /calculated_mol_wt=120510
     Region          101..1096
                     /region_name="2a30"
                     /note="K-Cl cotransporter; TIGR00930"
                     /db_xref="CDD:273347"
     CDS             1..1096
                     /gene="SLC12A1"
                     /coded_by="XM_061157081.1:1..3291"
                     /db_xref="GeneID:133066232"
ORIGIN      
        1 mslnnssnvf ldptpsntnr fqvnvvness aavndnadpp hyeetsfgde gqnrfrisfr
       61 pgnqecydnf lqtgetaktd asfhaydsht ntyylqtfgh ntvdavpkie yyrntgsvsg
      121 pkvnrpslld iheqlaknvs vapgsadvva ngegtpgdeq aenkvedqag avkfgwvkgv
      181 lvrcmlniwg vmlfirlswi vgeagiglgv liillstmvt sitglstsai atngfvrggg
      241 ayylisrslg pefggsigli fafanavava myvvgfaetv vdllkesdsm mvdptndiri
      301 igsitvvill gisvagmewe akaqvillii lliaianffi gtvipsnnek rargffnyqa
      361 sifaenfgps ftkgegffsv faiffpaatg ilaganisgd ledpqdaipk gtmlaifitt
      421 vayigvaicv gacvvrdatg svndtivsgv scngsaacgl gydfsrcqre pcqyglmnnf
      481 qvmsmvsgfg plitagifsa tlssalaslv sapkvfqalc kdniykalqf fakgygknne
      541 plrgyfltfv iamafiliae lntiapiisn fflasyalin fscfhasyak spgwrpaygi
      601 ynmwvslfga vlccavmfvi nwwaavityv iefflyiyvt ykkpdvnwgs stqalsyvsa
      661 ldnalelttv edhvknfrpq civltggpmt rpallditha ftknsglcic cevfvgprkl
      721 cvkemnsgma kkqawliknk ikafyaavaa dcfrdgvrsl lqasglgrmk pntlvigykk
      781 nwrkapltei enyvgiihda fdfeigvviv risqgfdisq vlqvqdelek leqerlalea
      841 tikdneseeg nggirglfkk agklnitkpt pkkdsginti qsmhvgefnq klveastqfk
      901 kkqgkgtidv wwlfddgglt llipyiltlr kkwkdcklri yvggkinrie eekiamasll
      961 skfrikfadi hvigdinikp nkeswkvfee miepyrlhes ckdlttaekl kretpwkitd
     1021 aeleavkeks yrqvrlnell qehsraanli vlslpvarkg sisdwlymaw leiltknlpp
     1081 vllvrgnhkn vltfys
//
LOCUS       XP_061013065            1096 aa            linear   MAM 02-DEC-2023
DEFINITION  solute carrier family 12 member 1 isoform X3 [Dama dama].
ACCESSION   XP_061013065
VERSION     XP_061013065.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157082.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1096
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1096
                     /product="solute carrier family 12 member 1 isoform X3"
                     /calculated_mol_wt=120392
     Region          101..1096
                     /region_name="2a30"
                     /note="K-Cl cotransporter; TIGR00930"
                     /db_xref="CDD:273347"
     CDS             1..1096
                     /gene="SLC12A1"
                     /coded_by="XM_061157082.1:1..3291"
                     /db_xref="GeneID:133066232"
ORIGIN      
        1 mslnnssnvf ldptpsntnr fqvnvvness aavndnadpp hyeetsfgde gqnrfrisfr
       61 pgnqecydnf lqtgetaktd asfhaydsht ntyylqtfgh ntvdavpkie yyrntgsvsg
      121 pkvnrpslld iheqlaknvs vapgsadvva ngegtpgdeq aenkvedqag avkfgwvkgv
      181 lvrcmlniwg vmlfirlswi vgeagiglgv iiiglavtvt gitglstsai atngyvrggg
      241 ayylisrslg pefggsigli fafanavava myvvgfaetv vdllkesdsm mvdptndiri
      301 igsitvvill gisvagmewe akaqvillii lliaianffi gtvipsnnek rargffnyqa
      361 sifaenfgps ftkgegffsv faiffpaatg ilaganisgd ledpqdaipk gtmlaifitt
      421 vayigvaicv gacvvrdatg svndtivsgv scngsaacgl gydfsrcqre pcqyglmnnf
      481 qvmsmvsgfg plitagifsa tlssalaslv sapkvfqalc kdniykalqf fakgygknne
      541 plrgyfltfv iamafiliae lntiapiisn fflasyalin fscfhasyak spgwrpaygi
      601 ynmwvslfga vlccavmfvi nwwaavityv iefflyiyvt ykkpdvnwgs stqalsyvsa
      661 ldnalelttv edhvknfrpq civltggpmt rpallditha ftknsglcic cevfvgprkl
      721 cvkemnsgma kkqawliknk ikafyaavaa dcfrdgvrsl lqasglgrmk pntlvigykk
      781 nwrkapltei enyvgiihda fdfeigvviv risqgfdisq vlqvqdelek leqerlalea
      841 tikdneseeg nggirglfkk agklnitkpt pkkdsginti qsmhvgefnq klveastqfk
      901 kkqgkgtidv wwlfddgglt llipyiltlr kkwkdcklri yvggkinrie eekiamasll
      961 skfrikfadi hvigdinikp nkeswkvfee miepyrlhes ckdlttaekl kretpwkitd
     1021 aeleavkeks yrqvrlnell qehsraanli vlslpvarkg sisdwlymaw leiltknlpp
     1081 vllvrgnhkn vltfys
//
LOCUS       XP_061013066             233 aa            linear   MAM 02-DEC-2023
DEFINITION  deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial
            isoform X1 [Dama dama].
ACCESSION   XP_061013066
VERSION     XP_061013066.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157083.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..233
                     /product="deoxyuridine 5'-triphosphate
                     nucleotidohydrolase, mitochondrial isoform X1"
                     /calculated_mol_wt=24864
     Region          95..222
                     /region_name="trimeric_dUTPase"
                     /note="Trimeric dUTP diphosphatases; cl00493"
                     /db_xref="CDD:444938"
     Site            order(115..116,126,131..132,134,150,152..157,163..165,169,
                     172,179,181,183,185,189..193,196,200)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:143638"
     Site            order(154..156,169..171,174,178..179)
                     /site_type="active"
                     /db_xref="CDD:143638"
     CDS             1..233
                     /gene="DUT"
                     /coded_by="XM_061157083.1:55..756"
                     /db_xref="GeneID:133066234"
ORIGIN      
        1 mtslcprpvl ghrffpslls svfngalrar pgaeaaglsr sgppldptpr gsvrlpalrl
       61 lssgrnlsrg grgskaqvvs pskraratev gdmrlrfarl sehataptkg saraagydly
      121 saydytlppm ekvlvktdiq ialpsgcygr vaprsglaak hfidvgagvi dedyrgnvgv
      181 vlfnfgkekf evkkgdriaq licerifype ieevqvlddt ergsggfgst gsn
//
LOCUS       XP_061013067             185 aa            linear   MAM 02-DEC-2023
DEFINITION  deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial
            isoform X2 [Dama dama].
ACCESSION   XP_061013067
VERSION     XP_061013067.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157084.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..185
                     /product="deoxyuridine 5'-triphosphate
                     nucleotidohydrolase, mitochondrial isoform X2"
                     /calculated_mol_wt=20011
     Region          47..174
                     /region_name="trimeric_dUTPase"
                     /note="Trimeric dUTP diphosphatases; cl00493"
                     /db_xref="CDD:444938"
     Site            order(67..68,78,83..84,86,102,104..109,115..117,121,124,
                     131,133,135,137,141..145,148,152)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:143638"
     Site            order(106..108,121..123,126,130..131)
                     /site_type="active"
                     /db_xref="CDD:143638"
     CDS             1..185
                     /gene="DUT"
                     /coded_by="XM_061157084.1:40..597"
                     /db_xref="GeneID:133066234"
ORIGIN      
        1 maaggaapgk raerrarpse nrrqmkeaqv vspskrarat evgdmrlrfa rlsehatapt
       61 kgsaraagyd lysaydytlp pmekvlvktd iqialpsgcy grvaprsgla akhfidvgag
      121 videdyrgnv gvvlfnfgke kfevkkgdri aqlicerify peieevqvld dtergsggfg
      181 stgsn
//
LOCUS       XP_061013068             164 aa            linear   MAM 02-DEC-2023
DEFINITION  deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial
            isoform X3 [Dama dama].
ACCESSION   XP_061013068
VERSION     XP_061013068.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157085.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..164
                     /product="deoxyuridine 5'-triphosphate
                     nucleotidohydrolase, mitochondrial isoform X3"
                     /calculated_mol_wt=17722
     Region          26..153
                     /region_name="trimeric_dUTPase"
                     /note="Trimeric dUTP diphosphatases; cl00493"
                     /db_xref="CDD:444938"
     Site            order(46..47,57,62..63,65,81,83..88,94..96,100,103,110,
                     112,114,116,120..124,127,131)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:143638"
     Site            order(85..87,100..102,105,109..110)
                     /site_type="active"
                     /db_xref="CDD:143638"
     CDS             1..164
                     /gene="DUT"
                     /coded_by="XM_061157085.1:86..580"
                     /db_xref="GeneID:133066234"
ORIGIN      
        1 mpcsqeaqvv spskrarate vgdmrlrfar lsehataptk gsaraagydl ysaydytlpp
       61 mekvlvktdi qialpsgcyg rvaprsglaa khfidvgagv idedyrgnvg vvlfnfgkek
      121 fevkkgdria qlicerifyp eieevqvldd tergsggfgs tgsn
//
LOCUS       XP_061013070            2871 aa            linear   MAM 02-DEC-2023
DEFINITION  fibrillin-1 isoform X1 [Dama dama].
ACCESSION   XP_061013070
VERSION     XP_061013070.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157087.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2871
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2871
                     /product="fibrillin-1 isoform X1"
                     /calculated_mol_wt=312102
     Region          48..82
                     /region_name="Fibrillin_U_N"
                     /note="Fibrillin 1 unique N-terminal domain; pfam18193"
                     /db_xref="CDD:436338"
     Region          194..>227
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          246..>276
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Region          288..329
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(288,291,306)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          343..389
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          490..521
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(490,493,506)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          530..571
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(530,533,548)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          572..612
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(572,575,589)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          613..646
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(613,616,630)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          668..711
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          765..806
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(765,768,783)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          860..>890
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          910..940
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF domain; pfam07645"
                     /db_xref="CDD:429571"
     Region          966..1008
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1070..1104
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Region          1113..1145
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1113,1116,1131)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1155..1188
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Region          <1194..1235
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Region          1326..1361
                     /region_name="EGF_3"
                     /note="EGF domain; pfam12947"
                     /db_xref="CDD:463759"
     Region          1367..1402
                     /region_name="EGF_3"
                     /note="EGF domain; pfam12947"
                     /db_xref="CDD:463759"
     Region          1446..1486
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1446,1449,1463)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1487..1518
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1487,1490,1504)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1549..1589
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1606..1638
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1606,1609,1624)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1648..1687
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1648,1651,1665)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1705..1748
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1766..1796
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF domain; pfam07645"
                     /db_xref="CDD:429571"
     Site            order(1766,1769,1784)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1808..1840
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1808,1811,1826)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1930..1972
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1930,1933,1949)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1973..2008
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(1973,1976,1991)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          2013..2043
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF domain; pfam07645"
                     /db_xref="CDD:429571"
     Site            order(2013,2016,2031)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          2068..2111
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          2127..2162
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(2127,2130,2144)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          2166..2205
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(2166,2169,2183)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          <2289..2328
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Region          <2357..2390
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          <2442..2482
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Region          2485..2514
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF domain; pfam07645"
                     /db_xref="CDD:429571"
     Region          2524..2566
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(2524,2527,2543)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          2567..>2596
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(2567,2570,2583)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          2607..2638
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(2607,2610,2624)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..2871
                     /gene="FBN1"
                     /coded_by="XM_061157087.1:40..8655"
                     /db_xref="GeneID:133066235"
ORIGIN      
        1 mrrgglleva lgftvllasy tshgadtnle agnvketran rakrrggggh dalkgpnvcg
       61 srynayccpg wktlpggnqc ivpicrhscg dgfcsrpnmc tcpsgqiaps cgsrsiqhcn
      121 ircmnggscs ddhclcqkgy igthcgqpvc esgclnggrc vapnrcacty gftgpqcerd
      181 yrtgpcftvi snqmcqgqls givctktlcc atvgrawghp cemcpaqphp crrgfipnir
      241 tgacqdvdec qaipglcqgg ncintvgsfe ckcpaghkfn evsqkcedid ecstipgicd
      301 ggectntvss yfckcppgfy tspdgtrcid vrpgycytal angrcsnqlp qsitkmqccc
      361 dvgrcwspga aaapemcpir atedfnklcs vpmvvperpg ypppplgpvp pvhpvppgfp
      421 agpqimiprp pveypypsre pprvlpvnvt dycqlfrylc qngrciptpg syrcecnkgf
      481 qldlrgecid vdeceknpca ggecintqgs ytcqcrpgyq stltrtecrd ideclqngri
      541 cnngrcintd gsfhcvcnag fhvtrdgknc edmdecsirn mclngmcine dgsfkcickp
      601 gfqlasdgry ckdinecetp gicmngrcvn tdgsyrcecf pglavgldgr vcvdthmrst
      661 cyggykrgqc vkplfgavtk secccastey afgepcqpcp sqnsaeyqal cssgpgitsa
      721 gsdinecald pdicpngice nlrgtykcic nsgyevdstg kncvdinecv lnsllcdngq
      781 crntpgsfvc tcpkgfiykp elktcedide cesspcingv cknspgsfic ecssestldp
      841 tkticietik gtcwqtvidg rceiningat lksqccsslg aawgspctpc qvdpicgkgy
      901 srikgtqced idecevfpgv cknglcvnsk gsfkcqcpsg mtldatgric ldirletcfl
      961 ryedeectlp vvgrhrmdac ccsvgaawgt eeceecpmrs tpeyeelcpr gpgfatkeit
     1021 ngkrffkdin eckmipnlct hgkcrntigs fkcrcdsgfa ldseernctd idecrispdl
     1081 cgrgqcvntp gdfeckcdeg yesgfmmmkn cmdidecqrd pllcrggvcl ntegsyrcec
     1141 paghqlapni sacidinece lsahlcphgr cvnligkyqc acnpgyhstp drlfcvdide
     1201 csimnggcet fctnsegsye cscqpgfalm pdqrsctdid ecednpnicd ggqctnipge
     1261 yrclcydgfm asedmktcvd vnecdlnpni clsgtcentk gsfichcdmg ysgkkgktgc
     1321 tdineceiga hncdrhavct ntagsfkcsc spgwigdgik ctdldecsng thmcsqhadc
     1381 kntmgsyrcl ckegytgdgf tctdldecse nlnlcgngqc lnapggyrce cdmgfvpsad
     1441 gkacedidec slpnicvfgt chnlpglfrc eceigyeldr sggnctdvne cldpttcisg
     1501 ncvntpgsyt cdcppdfeln ptrvgcvdtr sgncyldirp rgdngdtacs neigvgvska
     1561 scccslgkaw gtpcelcppv ntseykilcp ggegfrpnpi tviledidec qelpglcqgg
     1621 kcintfgsfq crcptgyyln edtrvcddvn ecetpgicgp gtcyntvgny tcicppdymq
     1681 vnggnncmdm rrslcyrnyy adnqtcdgel lfnmtkkmcc csynigrawn kpceqcpips
     1741 tdefatlcgs qrpgfvidiy tglpvdidec reipgvceng vcinmvgsfr cecpvgffyn
     1801 dkllvcedid ecqngpvcqr naecintags yrcdckpgyr ftstgqcndr necqeipnic
     1861 shgqcidtvg sfyclchtgf ktnadqtmcl dinecerdac gngtcrntig sfncrcnhgf
     1921 ilshnndcid vdecatgngn lcrngqcint vgsfqcqcne gyevapdgrt cvdineclld
     1981 prkcapgtcq nldgsyrcic ppgyslqndk cedidecvee peicalgtcs ntegsfkclc
     2041 pdgfslsstg rrcqdlrmsy cyakfeggkc sspksrnhsk qecccalkge gwgdpcelcp
     2101 tepdeafrqi cpygsgiivg pddsavdmde ckepdvckhg qcintdgsyr cecpfgyilq
     2161 gnecvdtdec svgnpcgngt cknviggfec tceegfepgp mmtcedinec aqnpllcafr
     2221 cvntygsyec kcpagyvlre drrmckdede ceegkhdcae kqmecknlig tylcicgpgy
     2281 qrrpdgegcv denecqtkpg icengrclnt rgsytcecnd gftaspnqde cldnregycf
     2341 tevlqnmcqi gssnrnpvtk secccdggrg wgphceicpf qgtvafkklc phgrgfmtng
     2401 adideckvih dvcrngecvn drgsyhcick tgytpditgt acvdlnecnq apkpcnfick
     2461 ntegsyqcsc pkgyilqedg rsckdldeca tkqhncqflc vntigsftck cppgftqhht
     2521 acidnnects dinlcgskgi cqntpgsftc ecqrgfsldp sgascedvde cegnhrcqhg
     2581 cqniiggyrc scpqgylqhy qwnqcvdene clsahicgga schntlgsyk cmcpagfqye
     2641 qfsggcqdin ecgsaqapcs ygcsnteggy lcacppgyfr igqghcvsgm gmgrgnpepp
     2701 assemddnsl speacyecki ngypkrgrkr rstnetdasn iedqpeikan vslaswdvek
     2761 tamfafnish isnkvrilel lpalttltnh nryliesgne ngffkinqke gisylhftkk
     2821 kpvagtyslq isstplykkk elnqledkyd kdylsgelgd nlkmkiqill h
//
LOCUS       XP_061013071            1364 aa            linear   MAM 02-DEC-2023
DEFINITION  fibrillin-1 isoform X2 [Dama dama].
ACCESSION   XP_061013071
VERSION     XP_061013071.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157088.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1364
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1364
                     /product="fibrillin-1 isoform X2"
                     /calculated_mol_wt=147374
     Region          48..82
                     /region_name="Fibrillin_U_N"
                     /note="Fibrillin 1 unique N-terminal domain; pfam18193"
                     /db_xref="CDD:436338"
     Region          194..>227
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          246..>276
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(246,249,264)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          288..329
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(288,291,306)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          343..389
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          490..521
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(490,493,506)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          530..571
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(530,533,548)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          572..612
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(572,575,589)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          613..646
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(613,616,630)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          668..711
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          723..753
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cl21504"
                     /db_xref="CDD:473889"
     Site            order(723,726,741)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          765..806
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(765,768,783)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          860..>890
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          910..940
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF domain; pfam07645"
                     /db_xref="CDD:429571"
     Region          966..1008
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1028..>1059
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Region          1070..1104
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Region          1113..1145
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1113,1116,1131)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1155..1188
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1155,1158,1173)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          <1194..1235
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Region          1238..1279
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Region          1280..1314
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(1280,1283,1298)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..1364
                     /gene="FBN1"
                     /coded_by="XM_061157088.1:40..4134"
                     /db_xref="GeneID:133066235"
ORIGIN      
        1 mrrgglleva lgftvllasy tshgadtnle agnvketran rakrrggggh dalkgpnvcg
       61 srynayccpg wktlpggnqc ivpicrhscg dgfcsrpnmc tcpsgqiaps cgsrsiqhcn
      121 ircmnggscs ddhclcqkgy igthcgqpvc esgclnggrc vapnrcacty gftgpqcerd
      181 yrtgpcftvi snqmcqgqls givctktlcc atvgrawghp cemcpaqphp crrgfipnir
      241 tgacqdvdec qaipglcqgg ncintvgsfe ckcpaghkfn evsqkcedid ecstipgicd
      301 ggectntvss yfckcppgfy tspdgtrcid vrpgycytal angrcsnqlp qsitkmqccc
      361 dvgrcwspga aaapemcpir atedfnklcs vpmvvperpg ypppplgpvp pvhpvppgfp
      421 agpqimiprp pveypypsre pprvlpvnvt dycqlfrylc qngrciptpg syrcecnkgf
      481 qldlrgecid vdeceknpca ggecintqgs ytcqcrpgyq stltrtecrd ideclqngri
      541 cnngrcintd gsfhcvcnag fhvtrdgknc edmdecsirn mclngmcine dgsfkcickp
      601 gfqlasdgry ckdinecetp gicmngrcvn tdgsyrcecf pglavgldgr vcvdthmrst
      661 cyggykrgqc vkplfgavtk secccastey afgepcqpcp sqnsaeyqal cssgpgitsa
      721 gsdinecald pdicpngice nlrgtykcic nsgyevdstg kncvdinecv lnsllcdngq
      781 crntpgsfvc tcpkgfiykp elktcedide cesspcingv cknspgsfic ecssestldp
      841 tkticietik gtcwqtvidg rceiningat lksqccsslg aawgspctpc qvdpicgkgy
      901 srikgtqced idecevfpgv cknglcvnsk gsfkcqcpsg mtldatgric ldirletcfl
      961 ryedeectlp vvgrhrmdac ccsvgaawgt eeceecpmrs tpeyeelcpr gpgfatkeit
     1021 ngkrffkdin eckmipnlct hgkcrntigs fkcrcdsgfa ldseernctd idecrispdl
     1081 cgrgqcvntp gdfeckcdeg yesgfmmmkn cmdidecqrd pllcrggvcl ntegsyrcec
     1141 paghqlapni sacidinece lsahlcphgr cvnligkyqc acnpgyhstp drlfcvdide
     1201 csimnggcet fctnsegsye cscqpgfalm pdqrsctdid ecednpnicd ggqctnipge
     1261 yrclcydgfm asedmktcvd vnecdlnpni clsgtcentk gsfichcdmg ysgkkgktgc
     1321 tgdtgsipdp grfhmpwgss ahapqllkpm hpgtralqqe kppq
//
LOCUS       XP_061013072             125 aa            linear   MAM 02-DEC-2023
DEFINITION  fibrillin-1 isoform X3 [Dama dama].
ACCESSION   XP_061013072
VERSION     XP_061013072.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157089.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..125
                     /product="fibrillin-1 isoform X3"
                     /calculated_mol_wt=13295
     CDS             1..125
                     /gene="FBN1"
                     /coded_by="XM_061157089.1:40..417"
                     /db_xref="GeneID:133066235"
ORIGIN      
        1 mrrgglleva lgftvllasy tshgadtnle agnvketran rakrrggggh dalkgvapre
       61 rwevgglilw mevcretsgl arhlshlcai tsqpvssggr lhvkietkpc svasqdvhaf
      121 thtnt
//
LOCUS       XP_061013073            1781 aa            linear   MAM 02-DEC-2023
DEFINITION  centrosomal protein of 152 kDa isoform X1 [Dama dama].
ACCESSION   XP_061013073
VERSION     XP_061013073.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157090.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1781
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1781
                     /product="centrosomal protein of 152 kDa isoform X1"
                     /calculated_mol_wt=205155
     Region          <253..>494
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          <551..>1081
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          1217..>1367
                     /region_name="PRK12704"
                     /note="phosphodiesterase; Provisional"
                     /db_xref="CDD:237177"
     CDS             1..1781
                     /gene="CEP152"
                     /coded_by="XM_061157090.1:169..5514"
                     /db_xref="GeneID:133066236"
ORIGIN      
        1 msldfgsval qtqnedeefd kedyerekel qqlltdlphd mldddlsspe lhysdcsedg
       61 reedthhseq lemnwtehqv lpkppnvnay neirdicige ksgngweenq srtedqhpvy
      121 hpegggdegg sgysppskye qtdlyhlpen frpytnsqkq efnsqptnvi tfsdtqrnhf
      181 qqfgmsqgps cqalesykvt ykpfqssaqn ngspaqdiae sdtfeglqqq flganetdsa
      241 enmqiiqlqv lnkakerqld nlveklnese rqirylnhql litkdekdgl alslresqkl
      301 fqngkereiq leaqikalet qiqalkvnee qmikksrtte laldslkqql ldlhhseslq
      361 rtreqhesiv mgltkkheeq vlslqrkwda alaalreqed icchlkdqvk qlernqeatr
      421 lekteiinrl trsleesqkq canllhsgsv qevaqlqlql qqaqkahams enmskalqee
      481 lkelkdeisl yesaaklgil psdsegelni eltesyvdlg ikkvnwkksk vksivqpegp
      541 getlskeevi lklkaevqrl ldsnsvkrhl vsqlqnelkn shkkiedlqv ekdeksietk
      601 tdtsekptnq iwpdssdmiv kdellqlkne iqvlqqqnqe lketeeklrn tnqdlcnqmr
      661 qmvqdfdrdk qeavdrsert yqqhheamka qiresllakh alekqqlfev yeatrlqlrs
      721 dldkvnkema avqecylevc rekdnleatl rksmekeqqa qekkrqllee reeyvrklqv
      781 eleekyqdtl vmekdkwlke hesnikqqve nevilakehw dkeqkeikqe liqqlekewq
      841 skldqtikam kkktsdccsq tdqettidvi skkemaimie ekkrkiqqnl eqeketaikg
      901 nlkklefele lkyceniakq veaavqnarh rwleelpela eykalvraeq kkweelqeqs
      961 vakrilfavs eakekwksev anmkknvtpg kemeekihsl qrelelknee lpvvvraela
     1021 karsewnkek qeeihriqeq neqdyrqfld dhrnkinevl aaakedflkq kaelllqket
     1081 elqtcldqsr rewtmqearr iqleihqhee diltvlefll kdtlkeqasg seskpllell
     1141 stcsskwmsv qcfeklkaci qkafqdtlsl lietidsdwg krimtkiykd patgrgdpgv
     1201 qamlpaptsg hhalplaavq eaeadkkkil eikdsccghc fqelenakqe cqdlkrklek
     1261 ccrhlqhler khkavvekig eentkvveel ieenndmknk leelrtlckt lpprslsega
     1321 ienaclpcne valeelrgqy ikavkkikrd mlryiqeske raaemvkaev lrerqetark
     1381 mrkyyliclq qilqddgkee gaekkiinaa sklammakll etpisnrsqs kttqsgvlpl
     1441 tserltgvek lkrndvnqni pchmesksns lktiprsmcd qvpkrraacn lrrqledeep
     1501 gdgkprcsre shldfqfrdn shkhvdvlpr sispefvpce dersfglhkk kdlvgdpdse
     1561 slqhsnahlf lgtfgnkpss rytpdlsese sthitfrspn erlglkvykc nplmesenaa
     1621 sekspslgvk eipvkdggdl sdssgwrsnt aslpysshel sflhggpqdt ldslvesvnf
     1681 kqfsaascls dseknmirqp tkcqsghapd lseeitysqp gkssmtlgyp phhkadtlks
     1741 efkelsstvp ptmcllpsrk liaplssqqd sgfdspfvnl d
//
LOCUS       XP_061013074            1780 aa            linear   MAM 02-DEC-2023
DEFINITION  centrosomal protein of 152 kDa isoform X2 [Dama dama].
ACCESSION   XP_061013074
VERSION     XP_061013074.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157091.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1780
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1780
                     /product="centrosomal protein of 152 kDa isoform X2"
                     /calculated_mol_wt=205053
     Region          <252..>493
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          <550..>1080
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          1216..>1366
                     /region_name="PRK12704"
                     /note="phosphodiesterase; Provisional"
                     /db_xref="CDD:237177"
     CDS             1..1780
                     /gene="CEP152"
                     /coded_by="XM_061157091.1:169..5511"
                     /db_xref="GeneID:133066236"
ORIGIN      
        1 msldfgsval qtqnedeefd kedyerekel qqlltdlphd mldddlsspe lhysdcsedg
       61 reedthhseq lemnwtehqv lpkppnvnay neirdicige ksgngweenq srtedqhpvy
      121 hpegggdegg sgysppskye qtdlyhlpen frpytnsqkq efnsqptnvi tfsdtqrnhf
      181 qqfgmsqgps cqalesykvt ykpfqssaqn ngspaqdiae sdtfeglqqq flganensae
      241 nmqiiqlqvl nkakerqldn lveklneser qirylnhqll itkdekdgla lslresqklf
      301 qngkereiql eaqikaletq iqalkvneeq mikksrttel aldslkqqll dlhhseslqr
      361 treqhesivm gltkkheeqv lslqrkwdaa laalreqedi cchlkdqvkq lernqeatrl
      421 ekteiinrlt rsleesqkqc anllhsgsvq evaqlqlqlq qaqkahamse nmskalqeel
      481 kelkdeisly esaaklgilp sdsegelnie ltesyvdlgi kkvnwkkskv ksivqpegpg
      541 etlskeevil klkaevqrll dsnsvkrhlv sqlqnelkns hkkiedlqve kdeksietkt
      601 dtsekptnqi wpdssdmivk dellqlknei qvlqqqnqel keteeklrnt nqdlcnqmrq
      661 mvqdfdrdkq eavdrserty qqhheamkaq iresllakha lekqqlfevy eatrlqlrsd
      721 ldkvnkemaa vqecylevcr ekdnleatlr ksmekeqqaq ekkrqlleer eeyvrklqve
      781 leekyqdtlv mekdkwlkeh esnikqqven evilakehwd keqkeikqel iqqlekewqs
      841 kldqtikamk kktsdccsqt dqettidvis kkemaimiee kkrkiqqnle qeketaikgn
      901 lkklefelel kyceniakqv eaavqnarhr wleelpelae ykalvraeqk kweelqeqsv
      961 akrilfavse akekwkseva nmkknvtpgk emeekihslq relelkneel pvvvraelak
     1021 arsewnkekq eeihriqeqn eqdyrqfldd hrnkinevla aakedflkqk aelllqkete
     1081 lqtcldqsrr ewtmqearri qleihqheed iltvlefllk dtlkeqasgs eskpllells
     1141 tcsskwmsvq cfeklkaciq kafqdtlsll ietidsdwgk rimtkiykdp atgrgdpgvq
     1201 amlpaptsgh halplaavqe aeadkkkile ikdsccghcf qelenakqec qdlkrklekc
     1261 crhlqhlerk hkavvekige entkvveeli eenndmknkl eelrtlcktl pprslsegai
     1321 enaclpcnev aleelrgqyi kavkkikrdm lryiqesker aaemvkaevl rerqetarkm
     1381 rkyyliclqq ilqddgkeeg aekkiinaas klammaklle tpisnrsqsk ttqsgvlplt
     1441 serltgvekl krndvnqnip chmesksnsl ktiprsmcdq vpkrraacnl rrqledeepg
     1501 dgkprcsres hldfqfrdns hkhvdvlprs ispefvpced ersfglhkkk dlvgdpdses
     1561 lqhsnahlfl gtfgnkpssr ytpdlseses thitfrspne rlglkvykcn plmesenaas
     1621 ekspslgvke ipvkdggdls dssgwrsnta slpysshels flhggpqdtl dslvesvnfk
     1681 qfsaasclsd seknmirqpt kcqsghapdl seeitysqpg kssmtlgypp hhkadtlkse
     1741 fkelsstvpp tmcllpsrkl iaplssqqds gfdspfvnld
//
LOCUS       XP_061013075            1779 aa            linear   MAM 02-DEC-2023
DEFINITION  centrosomal protein of 152 kDa isoform X3 [Dama dama].
ACCESSION   XP_061013075
VERSION     XP_061013075.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157092.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1779
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1779
                     /product="centrosomal protein of 152 kDa isoform X3"
                     /calculated_mol_wt=204871
     Region          <228..1001
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     Region          738..>1452
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..1779
                     /gene="CEP152"
                     /coded_by="XM_061157092.1:169..5508"
                     /db_xref="GeneID:133066236"
ORIGIN      
        1 msldfgsval qtqnedeefd kedyerekel qqlltdlphd mldddlsspe lhysdcsedg
       61 reedthhseq lemnwtehqv lpkppnvnay neirdicige ksgngweenq srtedqhpvy
      121 hpegggdegg sgysppskye qtdlyhlpen frpytnsqkq efnsqptnvi tfsdtqrnhf
      181 qqfgmsqgps cqalesykvt ykpfqssaqn ngspaqdiae sdtfeglqqq flganetdsa
      241 enmqiiqlqv lnkakerqld nlveklnese rqirylnhql litkdekdgl alslresqkl
      301 fqngkereiq leaqikalet qiqalkvnee qmikksrtte laldslkqql ldlhhseslq
      361 rtreqhesiv mgltkkheeq vlslqrkwda alaalreqed icchlkdqvk qlernqeatr
      421 lekteiinrl trsleesqkq canllhsgsv qevaqlqlql qqaqkahams enmskalqee
      481 lkelkdeisl yesaaklgil psdsegelni eltesyvdlg ikkvnwkksk vksivqpegp
      541 getlskeevi lklkaevqrl ldsnsvkrhl vsqlqnelkn shkkiedlqv ekdeksietk
      601 tdtsekptnq iwpdssdmiv kdellqlkne iqvlqqqnqe lketeeklrn tnqdlcnqmr
      661 qmvqdfdrdk qeavdrsert yqqhheamka qiresllakh alekqqlfev yeatrlqlrs
      721 dldkvnkema avqecylevc rekdnleatl rksmekeqqa qekklleere eyvrklqvel
      781 eekyqdtlvm ekdkwlkehe snikqqvene vilakehwdk eqkeikqeli qqlekewqsk
      841 ldqtikamkk ktsdccsqtd qettidvisk kemaimieek krkiqqnleq eketaikgnl
      901 kklefelelk yceniakqve aavqnarhrw leelpelaey kalvraeqkk weelqeqsva
      961 krilfavsea kekwksevan mkknvtpgke meekihslqr elelkneelp vvvraelaka
     1021 rsewnkekqe eihriqeqne qdyrqflddh rnkinevlaa akedflkqka elllqketel
     1081 qtcldqsrre wtmqearriq leihqheedi ltvlefllkd tlkeqasgse skpllellst
     1141 csskwmsvqc feklkaciqk afqdtlslli etidsdwgkr imtkiykdpa tgrgdpgvqa
     1201 mlpaptsghh alplaavqea eadkkkilei kdsccghcfq elenakqecq dlkrklekcc
     1261 rhlqhlerkh kavvekigee ntkvveelie enndmknkle elrtlcktlp prslsegaie
     1321 naclpcneva leelrgqyik avkkikrdml ryiqeskera aemvkaevlr erqetarkmr
     1381 kyyliclqqi lqddgkeega ekkiinaask lammakllet pisnrsqskt tqsgvlplts
     1441 erltgveklk rndvnqnipc hmesksnslk tiprsmcdqv pkrraacnlr rqledeepgd
     1501 gkprcsresh ldfqfrdnsh khvdvlprsi spefvpcede rsfglhkkkd lvgdpdsesl
     1561 qhsnahlflg tfgnkpssry tpdlsesest hitfrspner lglkvykcnp lmesenaase
     1621 kspslgvkei pvkdggdlsd ssgwrsntas lpysshelsf lhggpqdtld slvesvnfkq
     1681 fsaasclsds eknmirqptk cqsghapdls eeitysqpgk ssmtlgypph hkadtlksef
     1741 kelsstvppt mcllpsrkli aplssqqdsg fdspfvnld
//
LOCUS       XP_061013076            1725 aa            linear   MAM 02-DEC-2023
DEFINITION  centrosomal protein of 152 kDa isoform X4 [Dama dama].
ACCESSION   XP_061013076
VERSION     XP_061013076.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157093.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1725
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1725
                     /product="centrosomal protein of 152 kDa isoform X4"
                     /calculated_mol_wt=198526
     Region          <253..>494
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          <551..>1081
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..1725
                     /gene="CEP152"
                     /coded_by="XM_061157093.1:169..5346"
                     /db_xref="GeneID:133066236"
ORIGIN      
        1 msldfgsval qtqnedeefd kedyerekel qqlltdlphd mldddlsspe lhysdcsedg
       61 reedthhseq lemnwtehqv lpkppnvnay neirdicige ksgngweenq srtedqhpvy
      121 hpegggdegg sgysppskye qtdlyhlpen frpytnsqkq efnsqptnvi tfsdtqrnhf
      181 qqfgmsqgps cqalesykvt ykpfqssaqn ngspaqdiae sdtfeglqqq flganetdsa
      241 enmqiiqlqv lnkakerqld nlveklnese rqirylnhql litkdekdgl alslresqkl
      301 fqngkereiq leaqikalet qiqalkvnee qmikksrtte laldslkqql ldlhhseslq
      361 rtreqhesiv mgltkkheeq vlslqrkwda alaalreqed icchlkdqvk qlernqeatr
      421 lekteiinrl trsleesqkq canllhsgsv qevaqlqlql qqaqkahams enmskalqee
      481 lkelkdeisl yesaaklgil psdsegelni eltesyvdlg ikkvnwkksk vksivqpegp
      541 getlskeevi lklkaevqrl ldsnsvkrhl vsqlqnelkn shkkiedlqv ekdeksietk
      601 tdtsekptnq iwpdssdmiv kdellqlkne iqvlqqqnqe lketeeklrn tnqdlcnqmr
      661 qmvqdfdrdk qeavdrsert yqqhheamka qiresllakh alekqqlfev yeatrlqlrs
      721 dldkvnkema avqecylevc rekdnleatl rksmekeqqa qekkrqllee reeyvrklqv
      781 eleekyqdtl vmekdkwlke hesnikqqve nevilakehw dkeqkeikqe liqqlekewq
      841 skldqtikam kkktsdccsq tdqettidvi skkemaimie ekkrkiqqnl eqeketaikg
      901 nlkklefele lkyceniakq veaavqnarh rwleelpela eykalvraeq kkweelqeqs
      961 vakrilfavs eakekwksev anmkknvtpg kemeekihsl qrelelknee lpvvvraela
     1021 karsewnkek qeeihriqeq neqdyrqfld dhrnkinevl aaakedflkq kaelllqket
     1081 elqtcldqsr rewtmqearr iqleihqhee diltvlefll kdtlkeqasg seskpllell
     1141 stcsskwmsv qcfeklkaci qkafqdtlsl lietidsdwg krimtkiykd patgrgdpgv
     1201 qamlpaptsg hhalplaavq eaeaeentkv veelieennd mknkleelrt lcktlpprsl
     1261 segaienacl pcnevaleel rgqyikavkk ikrdmlryiq eskeraaemv kaevlrerqe
     1321 tarkmrkyyl iclqqilqdd gkeegaekki inaasklamm aklletpisn rsqskttqsg
     1381 vlpltserlt gveklkrndv nqnipchmes ksnslktipr smcdqvpkrr aacnlrrqle
     1441 deepgdgkpr csreshldfq frdnshkhvd vlprsispef vpcedersfg lhkkkdlvgd
     1501 pdseslqhsn ahlflgtfgn kpssrytpdl sesesthitf rspnerlglk vykcnplmes
     1561 enaaseksps lgvkeipvkd ggdlsdssgw rsntaslpys shelsflhgg pqdtldslve
     1621 svnfkqfsaa sclsdseknm irqptkcqsg hapdlseeit ysqpgkssmt lgypphhkad
     1681 tlksefkels stvpptmcll psrkliapls sqqdsgfdsp fvnld
//
LOCUS       XP_061013077            1719 aa            linear   MAM 02-DEC-2023
DEFINITION  centrosomal protein of 152 kDa isoform X5 [Dama dama].
ACCESSION   XP_061013077
VERSION     XP_061013077.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157094.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1719
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1719
                     /product="centrosomal protein of 152 kDa isoform X5"
                     /calculated_mol_wt=197376
     Region          <253..>494
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          <551..1076
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          809..>1397
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..1719
                     /gene="CEP152"
                     /coded_by="XM_061157094.1:169..5328"
                     /db_xref="GeneID:133066236"
ORIGIN      
        1 msldfgsval qtqnedeefd kedyerekel qqlltdlphd mldddlsspe lhysdcsedg
       61 reedthhseq lemnwtehqv lpkppnvnay neirdicige ksgngweenq srtedqhpvy
      121 hpegggdegg sgysppskye qtdlyhlpen frpytnsqkq efnsqptnvi tfsdtqrnhf
      181 qqfgmsqgps cqalesykvt ykpfqssaqn ngspaqdiae sdtfeglqqq flganetdsa
      241 enmqiiqlqv lnkakerqld nlveklnese rqirylnhql litkdekdgl alslresqkl
      301 fqngkereiq leaqikalet qiqalkvnee qmikksrtte laldslkqql ldlhhseslq
      361 rtreqhesiv mgltkkheeq vlslqrkwda alaalreqed icchlkdqvk qlernqeatr
      421 lekteiinrl trsleesqkq canllhsgsv qevaqlqlql qqaqkahams enmskalqee
      481 lkelkdeisl yesaaklgil psdsegelni eltesyvdlg ikkvnwkksk vksivqpegp
      541 getlskeevi lklkaevqrl ldsnsvkrhl vsqlqnelkn shkkiedlqv ekdeksietk
      601 tdtsekptnq iwpdssdmiv kdellqlkne iqvlqqqnqe lketeeklrn tnqdlcnqmr
      661 qmvqdfdrdk qeavdrsert yqqhheamka qiresllakh alekqqlfev yeatrlqlrs
      721 dldkvnkema avqecylevc rekdnleatl rksmekeqqa qekkikqeli qqlekewqsk
      781 ldqtikamkk ktsdccsqtd qettidvisk kemaimieek krkiqqnleq eketaikgnl
      841 kklefelelk yceniakqve aavqnarhrw leelpelaey kalvraeqkk weelqeqsva
      901 krilfavsea kekwksevan mkknvtpgke meekihslqr elelkneelp vvvraelaka
      961 rsewnkekqe eihriqeqne qdyrqflddh rnkinevlaa akedflkqka elllqketel
     1021 qtcldqsrre wtmqearriq leihqheedi ltvlefllkd tlkeqasgse skpllellst
     1081 csskwmsvqc feklkaciqk afqdtlslli etidsdwgkr imtkiykdpa tgrgdpgvqa
     1141 mlpaptsghh alplaavqea eadkkkilei kdsccghcfq elenakqecq dlkrklekcc
     1201 rhlqhlerkh kavvekigee ntkvveelie enndmknkle elrtlcktlp prslsegaie
     1261 naclpcneva leelrgqyik avkkikrdml ryiqeskera aemvkaevlr erqetarkmr
     1321 kyyliclqqi lqddgkeega ekkiinaask lammakllet pisnrsqskt tqsgvlplts
     1381 erltgveklk rndvnqnipc hmesksnslk tiprsmcdqv pkrraacnlr rqledeepgd
     1441 gkprcsresh ldfqfrdnsh khvdvlprsi spefvpcede rsfglhkkkd lvgdpdsesl
     1501 qhsnahlflg tfgnkpssry tpdlsesest hitfrspner lglkvykcnp lmesenaase
     1561 kspslgvkei pvkdggdlsd ssgwrsntas lpysshelsf lhggpqdtld slvesvnfkq
     1621 fsaasclsds eknmirqptk cqsghapdls eeitysqpgk ssmtlgypph hkadtlksef
     1681 kelsstvppt mcllpsrkli aplssqqdsg fdspfvnld
//
LOCUS       XP_061013078            1663 aa            linear   MAM 02-DEC-2023
DEFINITION  centrosomal protein of 152 kDa isoform X6 [Dama dama].
ACCESSION   XP_061013078
VERSION     XP_061013078.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157095.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1663
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1663
                     /product="centrosomal protein of 152 kDa isoform X6"
                     /calculated_mol_wt=190747
     Region          <253..>494
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          <551..1076
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     CDS             1..1663
                     /gene="CEP152"
                     /coded_by="XM_061157095.1:169..5160"
                     /db_xref="GeneID:133066236"
ORIGIN      
        1 msldfgsval qtqnedeefd kedyerekel qqlltdlphd mldddlsspe lhysdcsedg
       61 reedthhseq lemnwtehqv lpkppnvnay neirdicige ksgngweenq srtedqhpvy
      121 hpegggdegg sgysppskye qtdlyhlpen frpytnsqkq efnsqptnvi tfsdtqrnhf
      181 qqfgmsqgps cqalesykvt ykpfqssaqn ngspaqdiae sdtfeglqqq flganetdsa
      241 enmqiiqlqv lnkakerqld nlveklnese rqirylnhql litkdekdgl alslresqkl
      301 fqngkereiq leaqikalet qiqalkvnee qmikksrtte laldslkqql ldlhhseslq
      361 rtreqhesiv mgltkkheeq vlslqrkwda alaalreqed icchlkdqvk qlernqeatr
      421 lekteiinrl trsleesqkq canllhsgsv qevaqlqlql qqaqkahams enmskalqee
      481 lkelkdeisl yesaaklgil psdsegelni eltesyvdlg ikkvnwkksk vksivqpegp
      541 getlskeevi lklkaevqrl ldsnsvkrhl vsqlqnelkn shkkiedlqv ekdeksietk
      601 tdtsekptnq iwpdssdmiv kdellqlkne iqvlqqqnqe lketeeklrn tnqdlcnqmr
      661 qmvqdfdrdk qeavdrsert yqqhheamka qiresllakh alekqqlfev yeatrlqlrs
      721 dldkvnkema avqecylevc rekdnleatl rksmekeqqa qekkikqeli qqlekewqsk
      781 ldqtikamkk ktsdccsqtd qettidvisk kemaimieek krkiqqnleq eketaikgnl
      841 kklefelelk yceniakqve aavqnarhrw leelpelaey kalvraeqkk weelqeqsva
      901 krilfavsea kekwksevan mkknvtpgke meekihslqr elelkneelp vvvraelaka
      961 rsewnkekqe eihriqeqne qdyrqflddh rnkinevlaa akedflkqka elllqketel
     1021 qtcldqsrre wtmqearriq leihqheedi ltvlefllkd tlkeqasgse skpllellst
     1081 csskwmsvqc feklkaciqk afqdtlslli etidsdwgkr imtkiykdpa tgrgdpgvqa
     1141 mlpaptsghh alplaavqea eaeentkvve elieenndmk nkleelrtlc ktlpprslse
     1201 gaienaclpc nevaleelrg qyikavkkik rdmlryiqes keraaemvka evlrerqeta
     1261 rkmrkyylic lqqilqddgk eegaekkiin aasklammak lletpisnrs qskttqsgvl
     1321 pltserltgv eklkrndvnq nipchmesks nslktiprsm cdqvpkrraa cnlrrqlede
     1381 epgdgkprcs reshldfqfr dnshkhvdvl prsispefvp cedersfglh kkkdlvgdpd
     1441 seslqhsnah lflgtfgnkp ssrytpdlse sesthitfrs pnerlglkvy kcnplmesen
     1501 aasekspslg vkeipvkdgg dlsdssgwrs ntaslpyssh elsflhggpq dtldslvesv
     1561 nfkqfsaasc lsdseknmir qptkcqsgha pdlseeitys qpgkssmtlg ypphhkadtl
     1621 ksefkelsst vpptmcllps rkliaplssq qdsgfdspfv nld
//
LOCUS       XP_061013079            1468 aa            linear   MAM 02-DEC-2023
DEFINITION  centrosomal protein of 152 kDa isoform X7 [Dama dama].
ACCESSION   XP_061013079
VERSION     XP_061013079.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157096.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1468
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1468
                     /product="centrosomal protein of 152 kDa isoform X7"
                     /calculated_mol_wt=170510
     Region          <253..>494
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          <621..>1081
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..1468
                     /gene="CEP152"
                     /coded_by="XM_061157096.1:169..4575"
                     /db_xref="GeneID:133066236"
ORIGIN      
        1 msldfgsval qtqnedeefd kedyerekel qqlltdlphd mldddlsspe lhysdcsedg
       61 reedthhseq lemnwtehqv lpkppnvnay neirdicige ksgngweenq srtedqhpvy
      121 hpegggdegg sgysppskye qtdlyhlpen frpytnsqkq efnsqptnvi tfsdtqrnhf
      181 qqfgmsqgps cqalesykvt ykpfqssaqn ngspaqdiae sdtfeglqqq flganetdsa
      241 enmqiiqlqv lnkakerqld nlveklnese rqirylnhql litkdekdgl alslresqkl
      301 fqngkereiq leaqikalet qiqalkvnee qmikksrtte laldslkqql ldlhhseslq
      361 rtreqhesiv mgltkkheeq vlslqrkwda alaalreqed icchlkdqvk qlernqeatr
      421 lekteiinrl trsleesqkq canllhsgsv qevaqlqlql qqaqkahams enmskalqee
      481 lkelkdeisl yesaaklgil psdsegelni eltesyvdlg ikkvnwkksk vksivqpegp
      541 getlskeevi lklkaevqrl ldsnsvkrhl vsqlqnelkn shkkiedlqv ekdeksietk
      601 tdtsekptnq iwpdssdmiv kdellqlkne iqvlqqqnqe lketeeklrn tnqdlcnqmr
      661 qmvqdfdrdk qeavdrsert yqqhheamka qiresllakh alekqqlfev yeatrlqlrs
      721 dldkvnkema avqecylevc rekdnleatl rksmekeqqa qekkrqllee reeyvrklqv
      781 eleekyqdtl vmekdkwlke hesnikqqve nevilakehw dkeqkeikqe liqqlekewq
      841 skldqtikam kkktsdccsq tdqettidvi skkemaimie ekkrkiqqnl eqeketaikg
      901 nlkklefele lkyceniakq veaavqnarh rwleelpela eykalvraeq kkweelqeqs
      961 vakrilfavs eakekwksev anmkknvtpg kemeekihsl qrelelknee lpvvvraela
     1021 karsewnkek qeeihriqeq neqdyrqfld dhrnkinevl aaakedflkq kaelllqket
     1081 elqtcldqsr rewtmqearr iqleihqhee diltvlefll kdtlkeqasg seskpllell
     1141 stcsskwmsv qcfeklkaci qkafqdtlsl lietidsdwg krimtkiykd patgrgdpgv
     1201 qamlpaptsg hhalplaavq eaeadkkkil eikdsccghc fqelenakqe cqdlkrklek
     1261 ccrhlqhler khkavvekig eentkvveel ieenndmknk leelrtlckt lpprslsega
     1321 ienaclpcne valeelrgqy ikavkkikrd mlryiqeske raaemvkaev lrerqetark
     1381 mrkyyliclq qilqddgkee gaekkiinaa sklammakll etpisnrsqs kttqsakdge
     1441 alyseqkqdr eltatqimns llpnsdln
//
LOCUS       XP_061013080            1718 aa            linear   MAM 02-DEC-2023
DEFINITION  centrosomal protein of 152 kDa isoform X8 [Dama dama].
ACCESSION   XP_061013080
VERSION     XP_061013080.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157097.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1718
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1718
                     /product="centrosomal protein of 152 kDa isoform X8"
                     /calculated_mol_wt=197274
     Region          <252..>493
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          <550..1075
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          808..>1396
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..1718
                     /gene="CEP152"
                     /coded_by="XM_061157097.1:169..5325"
                     /db_xref="GeneID:133066236"
ORIGIN      
        1 msldfgsval qtqnedeefd kedyerekel qqlltdlphd mldddlsspe lhysdcsedg
       61 reedthhseq lemnwtehqv lpkppnvnay neirdicige ksgngweenq srtedqhpvy
      121 hpegggdegg sgysppskye qtdlyhlpen frpytnsqkq efnsqptnvi tfsdtqrnhf
      181 qqfgmsqgps cqalesykvt ykpfqssaqn ngspaqdiae sdtfeglqqq flganensae
      241 nmqiiqlqvl nkakerqldn lveklneser qirylnhqll itkdekdgla lslresqklf
      301 qngkereiql eaqikaletq iqalkvneeq mikksrttel aldslkqqll dlhhseslqr
      361 treqhesivm gltkkheeqv lslqrkwdaa laalreqedi cchlkdqvkq lernqeatrl
      421 ekteiinrlt rsleesqkqc anllhsgsvq evaqlqlqlq qaqkahamse nmskalqeel
      481 kelkdeisly esaaklgilp sdsegelnie ltesyvdlgi kkvnwkkskv ksivqpegpg
      541 etlskeevil klkaevqrll dsnsvkrhlv sqlqnelkns hkkiedlqve kdeksietkt
      601 dtsekptnqi wpdssdmivk dellqlknei qvlqqqnqel keteeklrnt nqdlcnqmrq
      661 mvqdfdrdkq eavdrserty qqhheamkaq iresllakha lekqqlfevy eatrlqlrsd
      721 ldkvnkemaa vqecylevcr ekdnleatlr ksmekeqqaq ekkikqeliq qlekewqskl
      781 dqtikamkkk tsdccsqtdq ettidviskk emaimieekk rkiqqnleqe ketaikgnlk
      841 klefelelky ceniakqvea avqnarhrwl eelpelaeyk alvraeqkkw eelqeqsvak
      901 rilfavseak ekwksevanm kknvtpgkem eekihslqre lelkneelpv vvraelakar
      961 sewnkekqee ihriqeqneq dyrqflddhr nkinevlaaa kedflkqkae lllqketelq
     1021 tcldqsrrew tmqearriql eihqheedil tvlefllkdt lkeqasgses kpllellstc
     1081 sskwmsvqcf eklkaciqka fqdtlsllie tidsdwgkri mtkiykdpat grgdpgvqam
     1141 lpaptsghha lplaavqeae adkkkileik dsccghcfqe lenakqecqd lkrklekccr
     1201 hlqhlerkhk avvekigeen tkvveeliee nndmknklee lrtlcktlpp rslsegaien
     1261 aclpcneval eelrgqyika vkkikrdmlr yiqeskeraa emvkaevlre rqetarkmrk
     1321 yyliclqqil qddgkeegae kkiinaaskl ammaklletp isnrsqsktt qsgvlpltse
     1381 rltgveklkr ndvnqnipch mesksnslkt iprsmcdqvp krraacnlrr qledeepgdg
     1441 kprcsreshl dfqfrdnshk hvdvlprsis pefvpceder sfglhkkkdl vgdpdseslq
     1501 hsnahlflgt fgnkpssryt pdlsesesth itfrspnerl glkvykcnpl mesenaasek
     1561 spslgvkeip vkdggdlsds sgwrsntasl pysshelsfl hggpqdtlds lvesvnfkqf
     1621 saasclsdse knmirqptkc qsghapdlse eitysqpgks smtlgypphh kadtlksefk
     1681 elsstvpptm cllpsrklia plssqqdsgf dspfvnld
//
LOCUS       XP_061013081            1662 aa            linear   MAM 02-DEC-2023
DEFINITION  centrosomal protein of 152 kDa isoform X9 [Dama dama].
ACCESSION   XP_061013081
VERSION     XP_061013081.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157098.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1662
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1662
                     /product="centrosomal protein of 152 kDa isoform X9"
                     /calculated_mol_wt=190645
     Region          <252..>493
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          <550..1075
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     CDS             1..1662
                     /gene="CEP152"
                     /coded_by="XM_061157098.1:169..5157"
                     /db_xref="GeneID:133066236"
ORIGIN      
        1 msldfgsval qtqnedeefd kedyerekel qqlltdlphd mldddlsspe lhysdcsedg
       61 reedthhseq lemnwtehqv lpkppnvnay neirdicige ksgngweenq srtedqhpvy
      121 hpegggdegg sgysppskye qtdlyhlpen frpytnsqkq efnsqptnvi tfsdtqrnhf
      181 qqfgmsqgps cqalesykvt ykpfqssaqn ngspaqdiae sdtfeglqqq flganensae
      241 nmqiiqlqvl nkakerqldn lveklneser qirylnhqll itkdekdgla lslresqklf
      301 qngkereiql eaqikaletq iqalkvneeq mikksrttel aldslkqqll dlhhseslqr
      361 treqhesivm gltkkheeqv lslqrkwdaa laalreqedi cchlkdqvkq lernqeatrl
      421 ekteiinrlt rsleesqkqc anllhsgsvq evaqlqlqlq qaqkahamse nmskalqeel
      481 kelkdeisly esaaklgilp sdsegelnie ltesyvdlgi kkvnwkkskv ksivqpegpg
      541 etlskeevil klkaevqrll dsnsvkrhlv sqlqnelkns hkkiedlqve kdeksietkt
      601 dtsekptnqi wpdssdmivk dellqlknei qvlqqqnqel keteeklrnt nqdlcnqmrq
      661 mvqdfdrdkq eavdrserty qqhheamkaq iresllakha lekqqlfevy eatrlqlrsd
      721 ldkvnkemaa vqecylevcr ekdnleatlr ksmekeqqaq ekkikqeliq qlekewqskl
      781 dqtikamkkk tsdccsqtdq ettidviskk emaimieekk rkiqqnleqe ketaikgnlk
      841 klefelelky ceniakqvea avqnarhrwl eelpelaeyk alvraeqkkw eelqeqsvak
      901 rilfavseak ekwksevanm kknvtpgkem eekihslqre lelkneelpv vvraelakar
      961 sewnkekqee ihriqeqneq dyrqflddhr nkinevlaaa kedflkqkae lllqketelq
     1021 tcldqsrrew tmqearriql eihqheedil tvlefllkdt lkeqasgses kpllellstc
     1081 sskwmsvqcf eklkaciqka fqdtlsllie tidsdwgkri mtkiykdpat grgdpgvqam
     1141 lpaptsghha lplaavqeae aeentkvvee lieenndmkn kleelrtlck tlpprslseg
     1201 aienaclpcn evaleelrgq yikavkkikr dmlryiqesk eraaemvkae vlrerqetar
     1261 kmrkyylicl qqilqddgke egaekkiina asklammakl letpisnrsq skttqsgvlp
     1321 ltserltgve klkrndvnqn ipchmesksn slktiprsmc dqvpkrraac nlrrqledee
     1381 pgdgkprcsr eshldfqfrd nshkhvdvlp rsispefvpc edersfglhk kkdlvgdpds
     1441 eslqhsnahl flgtfgnkps srytpdlses esthitfrsp nerlglkvyk cnplmesena
     1501 asekspslgv keipvkdggd lsdssgwrsn taslpysshe lsflhggpqd tldslvesvn
     1561 fkqfsaascl sdseknmirq ptkcqsghap dlseeitysq pgkssmtlgy pphhkadtlk
     1621 sefkelsstv pptmcllpsr kliaplssqq dsgfdspfvn ld
//
LOCUS       XP_061013083             191 aa            linear   MAM 02-DEC-2023
DEFINITION  EP300-interacting inhibitor of differentiation 1 [Dama dama].
ACCESSION   XP_061013083
VERSION     XP_061013083.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157100.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..191
                     /product="EP300-interacting inhibitor of differentiation
                     1"
                     /calculated_mol_wt=21126
     CDS             1..191
                     /gene="EID1"
                     /coded_by="XM_061157100.1:83..658"
                     /db_xref="GeneID:133066238"
ORIGIN      
        1 msemhelsel yeesndlqmd vipgesdlph mevgggsrel spnpsragap pqleeegpme
       61 eeaaqpmaep qgprglasrp spgeqpgqia gpdfesedeg eefddweddy dypeeeplsg
      121 agyrvsaale eankmflrts rareaaldgg fqmhyektpf dqlafieelf slmvvnrlte
      181 elgcdeiidr e
//
LOCUS       XP_061013084             630 aa            linear   MAM 02-DEC-2023
DEFINITION  SHC-transforming protein 4 [Dama dama].
ACCESSION   XP_061013084
VERSION     XP_061013084.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157101.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..630
                     /product="SHC-transforming protein 4"
                     /calculated_mol_wt=68603
     Region          <44..175
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          176..347
                     /region_name="PTB_Shc"
                     /note="Shc-like phosphotyrosine-binding (PTB) domain;
                     cd01209"
                     /db_xref="CDD:269920"
     Site            order(206..209,214,289..297,309,315,328,331..332,334..335,
                     338..339,342..345,347)
                     /site_type="other"
                     /note="phosphopeptide binding site [polypeptide binding]"
                     /db_xref="CDD:269920"
     Site            order(252,256,279)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:269920"
     Region          518..618
                     /region_name="SH2_SHC"
                     /note="Src homology 2 (SH2) domain found in SH2 adaptor
                     protein C (SHC); cd09925"
                     /db_xref="CDD:198179"
     Site            order(533,549,551,556,561,570..572)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198179"
     Site            order(560,571,573,575,580..582,587,593,604..606)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198179"
     CDS             1..630
                     /gene="SHC4"
                     /coded_by="XM_061157101.1:172..2064"
                     /db_xref="GeneID:133066239"
ORIGIN      
        1 mrergqdsla glvlyvglfg hpgmlhraky srfrnesits ldegspgsst gskgspqppy
       61 palaphlpae daalasqesp tplctliprm asvklanpat llslknfclg tkdvprlklq
      121 esqdpapssp aapetslnra mpapppqrdp lghratsltp dacplpgpge ptprnrqdrh
      181 flqhllglgm nyyvrymgci evlqsmrsld fgmrtqvtre aisrlceavp gangaikkrk
      241 ppakflstvl gksnlqfsgm nikltistcs ltlmnldnqq iianhhmqsi sfasggdpdt
      301 tdyvayvakd pvnqrachil ecrngmaqdv istigqafel rfkqylknps lnpsceseev
      361 pvdgpaeese dheyyneipg kqppaggvsd vrikvqateq maycpircek lcylpgnskc
      421 ssmyencleq sraignaher gvqsqrevsl mkhscrvdlf ddpgyintqv lrstlgsagn
      481 qssphplgsp whqekapetv qpgataqpas shslphikqq lrnedcyhgk lsrkaaesll
      541 vkdgdflvre satspgqyvl sglqggqakh lllvdpegkv rtkdhvfdnv ghliryhmdn
      601 slpiissgse vslkqpvrkd nnpgllhsnk
//
LOCUS       XP_061013085            1102 aa            linear   MAM 02-DEC-2023
DEFINITION  selenocysteine insertion sequence-binding protein 2-like [Dama
            dama].
ACCESSION   XP_061013085
VERSION     XP_061013085.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157102.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1102
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1102
                     /product="selenocysteine insertion sequence-binding
                     protein 2-like"
                     /calculated_mol_wt=121646
     Region          703..805
                     /region_name="Ribosomal_L7Ae"
                     /note="Ribosomal protein L7Ae/L30e/S12e/Gadd45 family;
                     pfam01248"
                     /db_xref="CDD:426153"
     CDS             1..1102
                     /gene="SECISBP2L"
                     /coded_by="XM_061157102.1:176..3484"
                     /db_xref="GeneID:133066240"
ORIGIN      
        1 mdrapadqnv klsaevepfi pqkknpdtfm ipmalpndng nvsgveptpi psylitcypf
       61 vqenqsnrqf plynndirwq qpnpnpagpy laypiisaqp pvsteytyyq lmpapcaqvm
      121 gfyhpfpapy sntfqaantv ntittecter pnhlgqvfpl sghrnrnsnr gpmvpkqqli
      181 qqhikskrpl vknvaiqket saagpdnrsk ivllvdasqq tdfpsdiank slsessaaml
      241 wkakgrrrra shptaessse qgaseadids dsgycspkhs nnqqpaaggl rnpdsgsish
      301 vdssvcaggv nwsnvtcqat qkkpwmeknq tfsrggrqte qrnnsqvgfr crghstsser
      361 rqnlqkrqdn kqlnpsqshr gdpnseslyf ededgfrels engnakdenm qqklsskvld
      421 dlpenspini vqtpipitts vpkraksqkk kalaaalata qeyseismeq kklqealska
      481 agkknktpvq ldlgdmlaal ekqqqamkar qitntrplsy tvvtaasfht kdstnrkplt
      541 ksqpcltsfn slditsskak kgkekeiakl krptalkkvi lkereekkgr ltvdhsllgs
      601 eepiemhldf iddlpqeivs qedtglsvps dtslspasqn spycmtpvsq gspassgigs
      661 pmasstitki hskrfreycn qvlckeidec vtlllqelvs fqeriyqkdp vrakarrrlv
      721 mglrevtkhm klnkikcvii spncekiqsk ggldealynv iamareqeip fvfalgrkal
      781 grcvnklvpv svvgifnyfg aeslfnklve lteearkayk dmvaameqeq aeealknvkk
      841 vphhmghsrn psaasaisfc svisepisev nekeyetnwr nmvetsdgle tsenerevsc
      901 khstsekpnk lpldtapvgk qaslvtagst tsatnpgkst vgdkeevkpd dlewasqqst
      961 etgsldgscr dllnssitst tstlvpgmle eeddeeeeee edyahepisv evqlnsries
     1021 wvsetqrtme tlqlgktlng seednaeqsg eeeaeaaevl epgveseawt adhhasqdqq
     1081 kpsncgslne elsdsnytpp nl
//
LOCUS       XP_061013086             194 aa            linear   MAM 02-DEC-2023
DEFINITION  fibroblast growth factor 7 [Dama dama].
ACCESSION   XP_061013086
VERSION     XP_061013086.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157103.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..194
                     /product="fibroblast growth factor 7"
                     /calculated_mol_wt=22358
     Region          57..192
                     /region_name="beta-trefoil_FGF7"
                     /note="FGF domain, beta-trefoil fold, found in fibroblast
                     growth factor 7 (FGF7) and similar proteins; cd23319"
                     /db_xref="CDD:467005"
     CDS             1..194
                     /gene="FGF7"
                     /coded_by="XM_061157103.1:490..1074"
                     /db_xref="GeneID:133066241"
ORIGIN      
        1 mrkwiltwil psllyrscfh iiclvgtisl acndmtpeqm atnvncsspe rhtrsydyme
       61 ggdirvrrlf crtqwylrid krgkvkgtqe mknnynimei rtvavgivai kgveseyyla
      121 mnkegklyak kecnedcnfk elilenhynt yasakwthsg gemfvalnqk gvpvrgkktk
      181 keqktahflp mait
//
LOCUS       XP_061013087             618 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: SUMO-activating enzyme subunit 2-like [Dama
            dama].
ACCESSION   XP_061013087
VERSION     XP_061013087.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157104.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..618
                     /product="LOW QUALITY PROTEIN: SUMO-activating enzyme
                     subunit 2-like"
                     /calculated_mol_wt=68309
     Region          18..422
                     /region_name="Uba2_SUMO"
                     /note="Ubiquitin activating enzyme (E1) subunit UBA2. UBA2
                     is part of the heterodimeric activating enzyme (E1),
                     specific for the SUMO family of ubiquitin-like proteins
                     (Ubls). E1 enzymes are part of a conjugation cascade to
                     attach Ub or Ubls, covalently to...; cd01489"
                     /db_xref="CDD:238766"
     Site            order(23,25,27,47,49,58,71,99)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:238766"
     Site            order(25,27,100,119..120,124..125,139,143..144)
                     /site_type="other"
                     /note="putative substrate interface [chemical binding]"
                     /db_xref="CDD:238766"
     Site            order(136,139,419,422)
                     /site_type="other"
                     /note="putative zinc binding site [ion binding]"
                     /db_xref="CDD:238766"
     Site            151
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:238766"
     Region          430..516
                     /region_name="UAE_UbL"
                     /note="Ubiquitin/SUMO-activating enzyme ubiquitin-like
                     domain; pfam14732"
                     /db_xref="CDD:464286"
     Region          527..607
                     /region_name="UBA2_C"
                     /note="SUMO-activating enzyme subunit 2 C-terminus;
                     pfam16195"
                     /db_xref="CDD:465058"
     CDS             1..618
                     /gene="LOC133066242"
                     /coded_by="XM_061157104.1:41..1897"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon"
                     /db_xref="GeneID:133066242"
ORIGIN      
        1 mwsrglprel aeavaggrvl vvgaggigce llknlvltgf shidlidldt idvsnlnrqf
       61 lfqkkhvgrs kaqvakesvl qfypkaniia yhdsimnxar nhvnrmclaa dvpliesgta
      121 gylgqvttik kgvtkcyech pkptqrtfpg ctirntpsep ihcivwvkyl fnqlfgeeda
      181 dqevspdrad peaswepmea eararassed gdikristke wakstgydpv klftklfkdd
      241 vrylltmdkl wqkrkppvpl dwaevqsqge etsasdqqne pqlglkdhqv ldiksyaclf
      301 sksietlrvh laekgdgael iwdkddpsam dfvtsaanlr mhifsmnmks rfdiksmagn
      361 iippiattna viaglivleg lkilsgkidq crtiflnkqp nprkkllvpc aldapnpncy
      421 vcaskpevtv qlnvhkvtvl tlqdkivkek famvapdvqi edgkgtilis seegereann
      481 hkklsefgir ngsrlqaddf lqdytllini lhsedlgkdv efevvgdape kvgpkqaeda
      541 aksitngsdd gaqpststaq eqddvlivds deegpsnnad isedersrkr kldekesvsa
      601 krsrieqaee leevialn
//
LOCUS       XP_061013088             535 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM227B isoform X1 [Dama dama].
ACCESSION   XP_061013088
VERSION     XP_061013088.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157105.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..535
                     /product="protein FAM227B isoform X1"
                     /calculated_mol_wt=62957
     Region          156..301
                     /region_name="FWWh"
                     /note="Protein of unknown function; pfam14922"
                     /db_xref="CDD:464378"
     CDS             1..535
                     /gene="FAM227B"
                     /coded_by="XM_061157105.1:187..1794"
                     /db_xref="GeneID:133066243"
ORIGIN      
        1 madqqqlphr thcqkmqepp knieeflklq nldhwpkeih lwesdellht mkkikqdssf
       61 tsiythlwgn vlrvddaama mesrlaecsi llrnhaseif ewnriisrti shgklkqyka
      121 flkkyhkekk imlsdemetk kdiegcnfpg frtneltqlp rhlnaeriyl filkahnfdg
      181 kvfkiwrshf lseasiallh dsfwwwflhk fkpdresqdc lfdrisesyv slfmsiplsr
      241 kdtffqvypd claqaiyvtf qeafpessnl fndefkedlg nniflwlsgl ppqkgfwthw
      301 klkelsttti hgskkmpsks ikdiiarnqe hlsasidfni tkilqnpkay ttpafkeesr
      361 ssklptkshy issgpefnrv lfdfggqspl ilyylkmhev agiskaprqv riklteilke
      421 pppaptyrdi ikeakrqfak nrkdfrienr vineeikllr qrqekvdkef hrlqakatkk
      481 pcevkndfen flhqlrfeal tereflasls ssssstedyn peeeesqeks evnci
//
LOCUS       XP_061013089             535 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM227B isoform X1 [Dama dama].
ACCESSION   XP_061013089
VERSION     XP_061013089.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157106.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..535
                     /product="protein FAM227B isoform X1"
                     /calculated_mol_wt=62957
     Region          156..301
                     /region_name="FWWh"
                     /note="Protein of unknown function; pfam14922"
                     /db_xref="CDD:464378"
     CDS             1..535
                     /gene="FAM227B"
                     /coded_by="XM_061157106.1:144..1751"
                     /db_xref="GeneID:133066243"
ORIGIN      
        1 madqqqlphr thcqkmqepp knieeflklq nldhwpkeih lwesdellht mkkikqdssf
       61 tsiythlwgn vlrvddaama mesrlaecsi llrnhaseif ewnriisrti shgklkqyka
      121 flkkyhkekk imlsdemetk kdiegcnfpg frtneltqlp rhlnaeriyl filkahnfdg
      181 kvfkiwrshf lseasiallh dsfwwwflhk fkpdresqdc lfdrisesyv slfmsiplsr
      241 kdtffqvypd claqaiyvtf qeafpessnl fndefkedlg nniflwlsgl ppqkgfwthw
      301 klkelsttti hgskkmpsks ikdiiarnqe hlsasidfni tkilqnpkay ttpafkeesr
      361 ssklptkshy issgpefnrv lfdfggqspl ilyylkmhev agiskaprqv riklteilke
      421 pppaptyrdi ikeakrqfak nrkdfrienr vineeikllr qrqekvdkef hrlqakatkk
      481 pcevkndfen flhqlrfeal tereflasls ssssstedyn peeeesqeks evnci
//
LOCUS       XP_061013090             535 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM227B isoform X1 [Dama dama].
ACCESSION   XP_061013090
VERSION     XP_061013090.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157107.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..535
                     /product="protein FAM227B isoform X1"
                     /calculated_mol_wt=62957
     Region          156..301
                     /region_name="FWWh"
                     /note="Protein of unknown function; pfam14922"
                     /db_xref="CDD:464378"
     CDS             1..535
                     /gene="FAM227B"
                     /coded_by="XM_061157107.1:148..1755"
                     /db_xref="GeneID:133066243"
ORIGIN      
        1 madqqqlphr thcqkmqepp knieeflklq nldhwpkeih lwesdellht mkkikqdssf
       61 tsiythlwgn vlrvddaama mesrlaecsi llrnhaseif ewnriisrti shgklkqyka
      121 flkkyhkekk imlsdemetk kdiegcnfpg frtneltqlp rhlnaeriyl filkahnfdg
      181 kvfkiwrshf lseasiallh dsfwwwflhk fkpdresqdc lfdrisesyv slfmsiplsr
      241 kdtffqvypd claqaiyvtf qeafpessnl fndefkedlg nniflwlsgl ppqkgfwthw
      301 klkelsttti hgskkmpsks ikdiiarnqe hlsasidfni tkilqnpkay ttpafkeesr
      361 ssklptkshy issgpefnrv lfdfggqspl ilyylkmhev agiskaprqv riklteilke
      421 pppaptyrdi ikeakrqfak nrkdfrienr vineeikllr qrqekvdkef hrlqakatkk
      481 pcevkndfen flhqlrfeal tereflasls ssssstedyn peeeesqeks evnci
//
LOCUS       XP_061013091             535 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM227B isoform X1 [Dama dama].
ACCESSION   XP_061013091
VERSION     XP_061013091.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157108.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..535
                     /product="protein FAM227B isoform X1"
                     /calculated_mol_wt=62957
     Region          156..301
                     /region_name="FWWh"
                     /note="Protein of unknown function; pfam14922"
                     /db_xref="CDD:464378"
     CDS             1..535
                     /gene="FAM227B"
                     /coded_by="XM_061157108.1:206..1813"
                     /db_xref="GeneID:133066243"
ORIGIN      
        1 madqqqlphr thcqkmqepp knieeflklq nldhwpkeih lwesdellht mkkikqdssf
       61 tsiythlwgn vlrvddaama mesrlaecsi llrnhaseif ewnriisrti shgklkqyka
      121 flkkyhkekk imlsdemetk kdiegcnfpg frtneltqlp rhlnaeriyl filkahnfdg
      181 kvfkiwrshf lseasiallh dsfwwwflhk fkpdresqdc lfdrisesyv slfmsiplsr
      241 kdtffqvypd claqaiyvtf qeafpessnl fndefkedlg nniflwlsgl ppqkgfwthw
      301 klkelsttti hgskkmpsks ikdiiarnqe hlsasidfni tkilqnpkay ttpafkeesr
      361 ssklptkshy issgpefnrv lfdfggqspl ilyylkmhev agiskaprqv riklteilke
      421 pppaptyrdi ikeakrqfak nrkdfrienr vineeikllr qrqekvdkef hrlqakatkk
      481 pcevkndfen flhqlrfeal tereflasls ssssstedyn peeeesqeks evnci
//
LOCUS       XP_061013092             535 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM227B isoform X1 [Dama dama].
ACCESSION   XP_061013092
VERSION     XP_061013092.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157109.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..535
                     /product="protein FAM227B isoform X1"
                     /calculated_mol_wt=62957
     Region          156..301
                     /region_name="FWWh"
                     /note="Protein of unknown function; pfam14922"
                     /db_xref="CDD:464378"
     CDS             1..535
                     /gene="FAM227B"
                     /coded_by="XM_061157109.1:141..1748"
                     /db_xref="GeneID:133066243"
ORIGIN      
        1 madqqqlphr thcqkmqepp knieeflklq nldhwpkeih lwesdellht mkkikqdssf
       61 tsiythlwgn vlrvddaama mesrlaecsi llrnhaseif ewnriisrti shgklkqyka
      121 flkkyhkekk imlsdemetk kdiegcnfpg frtneltqlp rhlnaeriyl filkahnfdg
      181 kvfkiwrshf lseasiallh dsfwwwflhk fkpdresqdc lfdrisesyv slfmsiplsr
      241 kdtffqvypd claqaiyvtf qeafpessnl fndefkedlg nniflwlsgl ppqkgfwthw
      301 klkelsttti hgskkmpsks ikdiiarnqe hlsasidfni tkilqnpkay ttpafkeesr
      361 ssklptkshy issgpefnrv lfdfggqspl ilyylkmhev agiskaprqv riklteilke
      421 pppaptyrdi ikeakrqfak nrkdfrienr vineeikllr qrqekvdkef hrlqakatkk
      481 pcevkndfen flhqlrfeal tereflasls ssssstedyn peeeesqeks evnci
//
LOCUS       XP_061013093             502 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM227B isoform X2 [Dama dama].
ACCESSION   XP_061013093
VERSION     XP_061013093.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157110.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..502
                     /product="protein FAM227B isoform X2"
                     /calculated_mol_wt=59176
     Region          156..301
                     /region_name="FWWh"
                     /note="Protein of unknown function; pfam14922"
                     /db_xref="CDD:464378"
     CDS             1..502
                     /gene="FAM227B"
                     /coded_by="XM_061157110.1:187..1695"
                     /db_xref="GeneID:133066243"
ORIGIN      
        1 madqqqlphr thcqkmqepp knieeflklq nldhwpkeih lwesdellht mkkikqdssf
       61 tsiythlwgn vlrvddaama mesrlaecsi llrnhaseif ewnriisrti shgklkqyka
      121 flkkyhkekk imlsdemetk kdiegcnfpg frtneltqlp rhlnaeriyl filkahnfdg
      181 kvfkiwrshf lseasiallh dsfwwwflhk fkpdresqdc lfdrisesyv slfmsiplsr
      241 kdtffqvypd claqaiyvtf qeafpessnl fndefkedlg nniflwlsgl ppqkgfwthw
      301 klkelsttti hgskkmpsks ikdiiarnqe hlsasidfni tkilqnpkay ttpafkeesr
      361 ssklptkshy issgpefnrv lfdfggqspl ilyylkmhev agiskaprqv riklteilke
      421 pppaptyrdi ikeakrqfak nrkdfrienr vineeikllr qrqekvdkef hrlqakatkk
      481 pcevkndfen flhqlcivli af
//
LOCUS       XP_061013094             501 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM227B isoform X3 [Dama dama].
ACCESSION   XP_061013094
VERSION     XP_061013094.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157111.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..501
                     /product="protein FAM227B isoform X3"
                     /calculated_mol_wt=58917
     Region          156..267
                     /region_name="FWWh"
                     /note="Protein of unknown function; pfam14922"
                     /db_xref="CDD:464378"
     CDS             1..501
                     /gene="FAM227B"
                     /coded_by="XM_061157111.1:187..1692"
                     /db_xref="GeneID:133066243"
ORIGIN      
        1 madqqqlphr thcqkmqepp knieeflklq nldhwpkeih lwesdellht mkkikqdssf
       61 tsiythlwgn vlrvddaama mesrlaecsi llrnhaseif ewnriisrti shgklkqyka
      121 flkkyhkekk imlsdemetk kdiegcnfpg frtneltqlp rhlnaeriyl filkahnfdg
      181 kvfkiwrshf lseasiallh dsfwwwflhk fkvypdclaq aiyvtfqeaf pessnlfnde
      241 fkedlgnnif lwlsglppqk gfwthwklke lstttihgsk kmpsksikdi iarnqehlsa
      301 sidfnitkil qnpkayttpa fkeesrsskl ptkshyissg pefnrvlfdf ggqsplilyy
      361 lkmhevagis kaprqvrikl teilkepppa ptyrdiikea krqfaknrkd frienrvine
      421 eikllrqrqe kvdkefhrlq akatkkpcev kndfenflhq lrfealtere flaslsssss
      481 stedynpeee esqeksevnc i
//
LOCUS       XP_061013096             458 aa            linear   MAM 02-DEC-2023
DEFINITION  N-acetylgalactosamine kinase isoform X1 [Dama dama].
ACCESSION   XP_061013096
VERSION     XP_061013096.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157113.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..458
                     /product="N-acetylgalactosamine kinase isoform X1"
                     /calculated_mol_wt=50319
     Region          18..455
                     /region_name="PLN02521"
                     /note="galactokinase"
                     /db_xref="CDD:215285"
     CDS             1..458
                     /gene="GALK2"
                     /coded_by="XM_061157113.1:154..1530"
                     /db_xref="GeneID:133066245"
ORIGIN      
        1 mategpavrr vhvaehprll klkemfnskf gsipkfyvra pgrvniigeh idycgysvlp
       61 maveqdmlia vepvkthilq lantnplypd fstsanniqi dktkplwhny flcgfkgiqe
      121 hfglsdltgm nclvdgnipp ssglssssal vccaglvtlt vlgmnlskve laeicakser
      181 yigtegggmd qsisflaeeg takliefspl ratdvklpsg avfvianscv emnkaatshf
      241 nirvmecrla akllakhksl pwkevlrlee vqaklgitle emllitedal hpepyspeei
      301 ckclgislqe lktqilspnt qdvltfklyq rakhvyseaa rvlqfkkice etpdnmvqll
      361 gelmnqshis crdmyecscp eldqlvdicr kfgaqgsrlt gagwggctvs ivpadklssf
      421 lanvheayyq rsnrsvvpek qslfatkpgg galvflet
//
LOCUS       XP_061013097             447 aa            linear   MAM 02-DEC-2023
DEFINITION  N-acetylgalactosamine kinase isoform X2 [Dama dama].
ACCESSION   XP_061013097
VERSION     XP_061013097.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157114.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..447
                     /product="N-acetylgalactosamine kinase isoform X2"
                     /calculated_mol_wt=49152
     Region          7..444
                     /region_name="PLN02521"
                     /note="galactokinase"
                     /db_xref="CDD:215285"
     CDS             1..447
                     /gene="GALK2"
                     /coded_by="XM_061157114.1:198..1541"
                     /db_xref="GeneID:133066245"
ORIGIN      
        1 mpilcdrllk lkemfnskfg sipkfyvrap grvniigehi dycgysvlpm aveqdmliav
       61 epvkthilql antnplypdf stsanniqid ktkplwhnyf lcgfkgiqeh fglsdltgmn
      121 clvdgnipps sglssssalv ccaglvtltv lgmnlskvel aeicaksery igtegggmdq
      181 sisflaeegt akliefsplr atdvklpsga vfvianscve mnkaatshfn irvmecrlaa
      241 kllakhkslp wkevlrleev qaklgitlee mllitedalh pepyspeeic kclgislqel
      301 ktqilspntq dvltfklyqr akhvyseaar vlqfkkicee tpdnmvqllg elmnqshisc
      361 rdmyecscpe ldqlvdicrk fgaqgsrltg agwggctvsi vpadklssfl anvheayyqr
      421 snrsvvpekq slfatkpggg alvflet
//
LOCUS       XP_061013098             434 aa            linear   MAM 02-DEC-2023
DEFINITION  N-acetylgalactosamine kinase isoform X3 [Dama dama].
ACCESSION   XP_061013098
VERSION     XP_061013098.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157115.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..434
                     /product="N-acetylgalactosamine kinase isoform X3"
                     /calculated_mol_wt=47598
     Region          2..431
                     /region_name="PLN02521"
                     /note="galactokinase"
                     /db_xref="CDD:215285"
     CDS             1..434
                     /gene="GALK2"
                     /coded_by="XM_061157115.1:427..1731"
                     /db_xref="GeneID:133066245"
ORIGIN      
        1 mfnskfgsip kfyvrapgrv niigehidyc gysvlpmave qdmliavepv kthilqlant
       61 nplypdfsts anniqidktk plwhnyflcg fkgiqehfgl sdltgmnclv dgnippssgl
      121 ssssalvcca glvtltvlgm nlskvelaei cakseryigt egggmdqsis flaeegtakl
      181 iefsplratd vklpsgavfv ianscvemnk aatshfnirv mecrlaakll akhkslpwke
      241 vlrleevqak lgitleemll itedalhpep yspeeickcl gislqelktq ilspntqdvl
      301 tfklyqrakh vyseaarvlq fkkiceetpd nmvqllgelm nqshiscrdm yecscpeldq
      361 lvdicrkfga qgsrltgagw ggctvsivpa dklssflanv heayyqrsnr svvpekqslf
      421 atkpgggalv flet
//
LOCUS       XP_061013099             443 aa            linear   MAM 02-DEC-2023
DEFINITION  COP9 signalosome complex subunit 2 isoform X1 [Dama dama].
ACCESSION   XP_061013099
VERSION     XP_061013099.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157116.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..443
                     /product="COP9 signalosome complex subunit 2 isoform X1"
                     /calculated_mol_wt=51466
     Region          40..434
                     /region_name="RPN6"
                     /note="26S proteasome regulatory complex component
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG5159"
                     /db_xref="CDD:227488"
     Region          309..413
                     /region_name="PCI"
                     /note="PCI domain; pfam01399"
                     /db_xref="CDD:460195"
     CDS             1..443
                     /gene="COPS2"
                     /coded_by="XM_061157116.1:102..1433"
                     /db_xref="GeneID:133066246"
ORIGIN      
        1 msdmeddfmc ddeedydley sedsnsepnv dlenqyynsk alkeddpkaa lssfqkvlel
       61 egekgewgfk alkqmikinf kltnfpemmn rykqlltyir savtrnysek sinsildyis
      121 tskqmdllqe fyettlealk dakndrlwfk tntklgklyl ereeygklqk ilrqlhqscq
      181 tddgeddlkk gtqlleiyal eiqmytaqkn nkklkalyeq slhiksaiph plimgvirec
      241 ggkmhlrege fekahtdffe afknydesgs prrttclkyl vlanmlmksg inpfdsqeak
      301 pykndpeila mtnlvsayqn nditefekil ktnhsnimdd pfirehieel lrnirtqvli
      361 klikpytrih ipfiskelni dvadvesllv qcildntihg ridqvnqlle ldhqkrggar
      421 ytaldkwtnq lnslnqavvs kla
//
LOCUS       XP_061013100             450 aa            linear   MAM 02-DEC-2023
DEFINITION  COP9 signalosome complex subunit 2 isoform X2 [Dama dama].
ACCESSION   XP_061013100
VERSION     XP_061013100.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157117.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..450
                     /product="COP9 signalosome complex subunit 2 isoform X2"
                     /calculated_mol_wt=52274
     Region          40..441
                     /region_name="RPN6"
                     /note="26S proteasome regulatory complex component
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG5159"
                     /db_xref="CDD:227488"
     Region          316..420
                     /region_name="PCI"
                     /note="PCI domain; pfam01399"
                     /db_xref="CDD:460195"
     CDS             1..450
                     /gene="COPS2"
                     /coded_by="XM_061157117.1:202..1554"
                     /db_xref="GeneID:133066246"
ORIGIN      
        1 msdmeddfmc ddeedydley sedsnsepnv dlenqyynsk alkeddpkaa lssfqkvlel
       61 egekgewgfk alkqmikinf kltnfpemmn rykqlltyir savtrnysek sinsildyis
      121 tskqnsdflc qmdllqefye ttlealkdak ndrlwfktnt klgklylere eygklqkilr
      181 qlhqscqtdd geddlkkgtq lleiyaleiq mytaqknnkk lkalyeqslh iksaiphpli
      241 mgvirecggk mhlregefek ahtdffeafk nydesgsprr ttclkylvla nmlmksginp
      301 fdsqeakpyk ndpeilamtn lvsayqnndi tefekilktn hsnimddpfi rehieellrn
      361 irtqvlikli kpytrihipf iskelnidva dvesllvqci ldntihgrid qvnqlleldh
      421 qkrggaryta ldkwtnqlns lnqavvskla
//
LOCUS       XP_061013101             301 aa            linear   MAM 02-DEC-2023
DEFINITION  tRNA-uridine aminocarboxypropyltransferase 1 [Dama dama].
ACCESSION   XP_061013101
VERSION     XP_061013101.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157118.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..301
                     /product="tRNA-uridine aminocarboxypropyltransferase 1"
                     /calculated_mol_wt=34719
     Region          66..286
                     /region_name="DTW"
                     /note="DTW domain; pfam03942"
                     /db_xref="CDD:461101"
     CDS             1..301
                     /gene="DTWD1"
                     /coded_by="XM_061157118.1:198..1103"
                     /db_xref="GeneID:133066248"
ORIGIN      
        1 mslstpiflk ereednskfv eiqqsqttci aaedplqnlc lasqevlkka qqngrskclk
       61 cggsrmfycy tcyvpvenvp veqiphvklp lkidiikhpn etdgkstavh akllapefvn
      121 iytypcipey eekdhevalv fpgpksvsvk disfhlqkks qnsirgkndd ldkpsikrkk
      181 teeqnlndsk ckattlkkiv fidstwnqtn kiftderlqg llqvelktrk tcfwrhqkgk
      241 pdtflstiea iyyflvdyht dilkekykgq ydnllffysf mhqliknakc pgdketrklt
      301 h
//
LOCUS       XP_061013102             301 aa            linear   MAM 02-DEC-2023
DEFINITION  tRNA-uridine aminocarboxypropyltransferase 1 [Dama dama].
ACCESSION   XP_061013102
VERSION     XP_061013102.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157119.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..301
                     /product="tRNA-uridine aminocarboxypropyltransferase 1"
                     /calculated_mol_wt=34719
     Region          66..286
                     /region_name="DTW"
                     /note="DTW domain; pfam03942"
                     /db_xref="CDD:461101"
     CDS             1..301
                     /gene="DTWD1"
                     /coded_by="XM_061157119.1:287..1192"
                     /db_xref="GeneID:133066248"
ORIGIN      
        1 mslstpiflk ereednskfv eiqqsqttci aaedplqnlc lasqevlkka qqngrskclk
       61 cggsrmfycy tcyvpvenvp veqiphvklp lkidiikhpn etdgkstavh akllapefvn
      121 iytypcipey eekdhevalv fpgpksvsvk disfhlqkks qnsirgkndd ldkpsikrkk
      181 teeqnlndsk ckattlkkiv fidstwnqtn kiftderlqg llqvelktrk tcfwrhqkgk
      241 pdtflstiea iyyflvdyht dilkekykgq ydnllffysf mhqliknakc pgdketrklt
      301 h
//
LOCUS       XP_061013103             301 aa            linear   MAM 02-DEC-2023
DEFINITION  tRNA-uridine aminocarboxypropyltransferase 1 [Dama dama].
ACCESSION   XP_061013103
VERSION     XP_061013103.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157120.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..301
                     /product="tRNA-uridine aminocarboxypropyltransferase 1"
                     /calculated_mol_wt=34719
     Region          66..286
                     /region_name="DTW"
                     /note="DTW domain; pfam03942"
                     /db_xref="CDD:461101"
     CDS             1..301
                     /gene="DTWD1"
                     /coded_by="XM_061157120.1:250..1155"
                     /db_xref="GeneID:133066248"
ORIGIN      
        1 mslstpiflk ereednskfv eiqqsqttci aaedplqnlc lasqevlkka qqngrskclk
       61 cggsrmfycy tcyvpvenvp veqiphvklp lkidiikhpn etdgkstavh akllapefvn
      121 iytypcipey eekdhevalv fpgpksvsvk disfhlqkks qnsirgkndd ldkpsikrkk
      181 teeqnlndsk ckattlkkiv fidstwnqtn kiftderlqg llqvelktrk tcfwrhqkgk
      241 pdtflstiea iyyflvdyht dilkekykgq ydnllffysf mhqliknakc pgdketrklt
      301 h
//
LOCUS       XP_061013104             301 aa            linear   MAM 02-DEC-2023
DEFINITION  tRNA-uridine aminocarboxypropyltransferase 1 [Dama dama].
ACCESSION   XP_061013104
VERSION     XP_061013104.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157121.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..301
                     /product="tRNA-uridine aminocarboxypropyltransferase 1"
                     /calculated_mol_wt=34719
     Region          66..286
                     /region_name="DTW"
                     /note="DTW domain; pfam03942"
                     /db_xref="CDD:461101"
     CDS             1..301
                     /gene="DTWD1"
                     /coded_by="XM_061157121.1:77..982"
                     /db_xref="GeneID:133066248"
ORIGIN      
        1 mslstpiflk ereednskfv eiqqsqttci aaedplqnlc lasqevlkka qqngrskclk
       61 cggsrmfycy tcyvpvenvp veqiphvklp lkidiikhpn etdgkstavh akllapefvn
      121 iytypcipey eekdhevalv fpgpksvsvk disfhlqkks qnsirgkndd ldkpsikrkk
      181 teeqnlndsk ckattlkkiv fidstwnqtn kiftderlqg llqvelktrk tcfwrhqkgk
      241 pdtflstiea iyyflvdyht dilkekykgq ydnllffysf mhqliknakc pgdketrklt
      301 h
//
LOCUS       XP_061013105             301 aa            linear   MAM 02-DEC-2023
DEFINITION  tRNA-uridine aminocarboxypropyltransferase 1 [Dama dama].
ACCESSION   XP_061013105
VERSION     XP_061013105.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157122.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..301
                     /product="tRNA-uridine aminocarboxypropyltransferase 1"
                     /calculated_mol_wt=34719
     Region          66..286
                     /region_name="DTW"
                     /note="DTW domain; pfam03942"
                     /db_xref="CDD:461101"
     CDS             1..301
                     /gene="DTWD1"
                     /coded_by="XM_061157122.1:123..1028"
                     /db_xref="GeneID:133066248"
ORIGIN      
        1 mslstpiflk ereednskfv eiqqsqttci aaedplqnlc lasqevlkka qqngrskclk
       61 cggsrmfycy tcyvpvenvp veqiphvklp lkidiikhpn etdgkstavh akllapefvn
      121 iytypcipey eekdhevalv fpgpksvsvk disfhlqkks qnsirgkndd ldkpsikrkk
      181 teeqnlndsk ckattlkkiv fidstwnqtn kiftderlqg llqvelktrk tcfwrhqkgk
      241 pdtflstiea iyyflvdyht dilkekykgq ydnllffysf mhqliknakc pgdketrklt
      301 h
//
LOCUS       XP_061013106            1192 aa            linear   MAM 02-DEC-2023
DEFINITION  probable phospholipid-transporting ATPase IM isoform X1 [Dama
            dama].
ACCESSION   XP_061013106
VERSION     XP_061013106.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157123.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1192
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1192
                     /product="probable phospholipid-transporting ATPase IM
                     isoform X1"
                     /calculated_mol_wt=135438
     Region          30..973
                     /region_name="P-type_ATPase_APLT_Dnf-like"
                     /note="Aminophospholipid translocases (APLTs), similar to
                     Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2,
                     -10D, -11B, -11C; cd02073"
                     /db_xref="CDD:319770"
     Site            order(392..394,537,560..562,627,674..676,789,792,795,815,
                     818)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:319770"
     CDS             1..1192
                     /gene="ATP8B4"
                     /coded_by="XM_061157123.1:197..3775"
                     /db_xref="GeneID:133066250"
ORIGIN      
        1 mfcskkksfe verivkandr eynekflykd nrihtskyni ltflpinlfe qfqrvanayf
       61 lfllilqlip eissltwftt ivplvlvvtm tavkdatddy frhksdnqvn nrqsevlids
      121 klqnekwmnv kvgdiiklen nqfvaadlll lsssephglc yietaeldge tnlkvrhals
      181 vtselgadts rlakfdgivv ceapnnkldk ftgvlswkgs khslnnekii lrgcvlrnts
      241 wcfgmvifag pdtklmqnsg ktkfkrtsid rlmntlvlwi fgfliclgti laignsiwen
      301 qvgdqfrtfl fwnegeknsv fsgfltfwsy iiilntvvpi slyvsvevir lghsyfinwd
      361 rkmyysrkat paeartttln eelgqieyvf sdktgtltqn imtfkkcsin griygevhdd
      421 lgqktdmtkk ketvgfsvsp qadrtfqffd hhlmesielg dpkvheflrl lalchtvmse
      481 ensagqliyq vqspdegalv taaknlgfif ksrtpetiti eelgtlvtyq llafldfnnf
      541 rkrmsvivrn pegqiklysk gadtilferl hpsnedlltl tsdhlsefag eglrtlaiay
      601 rdlddkyfre whkmledant atderderia glyeeierdl mllgataved klqdgvietv
      661 tslslaniki wvltgdkqet ainigyacnm ltddmndvfi iagntaaevr eelrkakenl
      721 fgqnrsfsng hvvfekkqsl eldsvveetv tgdyaliing hslahalesd vkndllelac
      781 mcktvvccrv tplqkaqvve lvkkyrnavt laigdgandv smiksahigv gisgqeglqa
      841 vlasdysfaq frylqrlllv hgrwsyvrmc kflcyffykn faftlvhfwf gffcgfsaqt
      901 vydqwfitlf nivytslpvl amgifdqdvs dqnsmdypql ykpgqlnllf nkhefficma
      961 hgiytslalf fipygafynm agddgqhtad yqsfavtmat slvivvsvqi aldtsywtvi
     1021 nhvfiwgsia tyfsilftmh sngifglfpn qfpfvgnarh sltqkciwlv illttvasvm
     1081 pvvafrflkv dlfptlsdqi rqwqkaqkka rplrsrkpqt rrsssrrsgy afahqegyge
     1141 litsgknmra knpppmsgle ktlynstswi enlckkttdt vssfsqdktv kl
//
LOCUS       XP_061013107            1192 aa            linear   MAM 02-DEC-2023
DEFINITION  probable phospholipid-transporting ATPase IM isoform X1 [Dama
            dama].
ACCESSION   XP_061013107
VERSION     XP_061013107.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157124.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1192
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1192
                     /product="probable phospholipid-transporting ATPase IM
                     isoform X1"
                     /calculated_mol_wt=135438
     Region          30..973
                     /region_name="P-type_ATPase_APLT_Dnf-like"
                     /note="Aminophospholipid translocases (APLTs), similar to
                     Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2,
                     -10D, -11B, -11C; cd02073"
                     /db_xref="CDD:319770"
     Site            order(392..394,537,560..562,627,674..676,789,792,795,815,
                     818)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:319770"
     CDS             1..1192
                     /gene="ATP8B4"
                     /coded_by="XM_061157124.1:130..3708"
                     /db_xref="GeneID:133066250"
ORIGIN      
        1 mfcskkksfe verivkandr eynekflykd nrihtskyni ltflpinlfe qfqrvanayf
       61 lfllilqlip eissltwftt ivplvlvvtm tavkdatddy frhksdnqvn nrqsevlids
      121 klqnekwmnv kvgdiiklen nqfvaadlll lsssephglc yietaeldge tnlkvrhals
      181 vtselgadts rlakfdgivv ceapnnkldk ftgvlswkgs khslnnekii lrgcvlrnts
      241 wcfgmvifag pdtklmqnsg ktkfkrtsid rlmntlvlwi fgfliclgti laignsiwen
      301 qvgdqfrtfl fwnegeknsv fsgfltfwsy iiilntvvpi slyvsvevir lghsyfinwd
      361 rkmyysrkat paeartttln eelgqieyvf sdktgtltqn imtfkkcsin griygevhdd
      421 lgqktdmtkk ketvgfsvsp qadrtfqffd hhlmesielg dpkvheflrl lalchtvmse
      481 ensagqliyq vqspdegalv taaknlgfif ksrtpetiti eelgtlvtyq llafldfnnf
      541 rkrmsvivrn pegqiklysk gadtilferl hpsnedlltl tsdhlsefag eglrtlaiay
      601 rdlddkyfre whkmledant atderderia glyeeierdl mllgataved klqdgvietv
      661 tslslaniki wvltgdkqet ainigyacnm ltddmndvfi iagntaaevr eelrkakenl
      721 fgqnrsfsng hvvfekkqsl eldsvveetv tgdyaliing hslahalesd vkndllelac
      781 mcktvvccrv tplqkaqvve lvkkyrnavt laigdgandv smiksahigv gisgqeglqa
      841 vlasdysfaq frylqrlllv hgrwsyvrmc kflcyffykn faftlvhfwf gffcgfsaqt
      901 vydqwfitlf nivytslpvl amgifdqdvs dqnsmdypql ykpgqlnllf nkhefficma
      961 hgiytslalf fipygafynm agddgqhtad yqsfavtmat slvivvsvqi aldtsywtvi
     1021 nhvfiwgsia tyfsilftmh sngifglfpn qfpfvgnarh sltqkciwlv illttvasvm
     1081 pvvafrflkv dlfptlsdqi rqwqkaqkka rplrsrkpqt rrsssrrsgy afahqegyge
     1141 litsgknmra knpppmsgle ktlynstswi enlckkttdt vssfsqdktv kl
//
LOCUS       XP_061013108            1192 aa            linear   MAM 02-DEC-2023
DEFINITION  probable phospholipid-transporting ATPase IM isoform X1 [Dama
            dama].
ACCESSION   XP_061013108
VERSION     XP_061013108.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157125.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1192
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1192
                     /product="probable phospholipid-transporting ATPase IM
                     isoform X1"
                     /calculated_mol_wt=135438
     Region          30..973
                     /region_name="P-type_ATPase_APLT_Dnf-like"
                     /note="Aminophospholipid translocases (APLTs), similar to
                     Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2,
                     -10D, -11B, -11C; cd02073"
                     /db_xref="CDD:319770"
     Site            order(392..394,537,560..562,627,674..676,789,792,795,815,
                     818)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:319770"
     CDS             1..1192
                     /gene="ATP8B4"
                     /coded_by="XM_061157125.1:143..3721"
                     /db_xref="GeneID:133066250"
ORIGIN      
        1 mfcskkksfe verivkandr eynekflykd nrihtskyni ltflpinlfe qfqrvanayf
       61 lfllilqlip eissltwftt ivplvlvvtm tavkdatddy frhksdnqvn nrqsevlids
      121 klqnekwmnv kvgdiiklen nqfvaadlll lsssephglc yietaeldge tnlkvrhals
      181 vtselgadts rlakfdgivv ceapnnkldk ftgvlswkgs khslnnekii lrgcvlrnts
      241 wcfgmvifag pdtklmqnsg ktkfkrtsid rlmntlvlwi fgfliclgti laignsiwen
      301 qvgdqfrtfl fwnegeknsv fsgfltfwsy iiilntvvpi slyvsvevir lghsyfinwd
      361 rkmyysrkat paeartttln eelgqieyvf sdktgtltqn imtfkkcsin griygevhdd
      421 lgqktdmtkk ketvgfsvsp qadrtfqffd hhlmesielg dpkvheflrl lalchtvmse
      481 ensagqliyq vqspdegalv taaknlgfif ksrtpetiti eelgtlvtyq llafldfnnf
      541 rkrmsvivrn pegqiklysk gadtilferl hpsnedlltl tsdhlsefag eglrtlaiay
      601 rdlddkyfre whkmledant atderderia glyeeierdl mllgataved klqdgvietv
      661 tslslaniki wvltgdkqet ainigyacnm ltddmndvfi iagntaaevr eelrkakenl
      721 fgqnrsfsng hvvfekkqsl eldsvveetv tgdyaliing hslahalesd vkndllelac
      781 mcktvvccrv tplqkaqvve lvkkyrnavt laigdgandv smiksahigv gisgqeglqa
      841 vlasdysfaq frylqrlllv hgrwsyvrmc kflcyffykn faftlvhfwf gffcgfsaqt
      901 vydqwfitlf nivytslpvl amgifdqdvs dqnsmdypql ykpgqlnllf nkhefficma
      961 hgiytslalf fipygafynm agddgqhtad yqsfavtmat slvivvsvqi aldtsywtvi
     1021 nhvfiwgsia tyfsilftmh sngifglfpn qfpfvgnarh sltqkciwlv illttvasvm
     1081 pvvafrflkv dlfptlsdqi rqwqkaqkka rplrsrkpqt rrsssrrsgy afahqegyge
     1141 litsgknmra knpppmsgle ktlynstswi enlckkttdt vssfsqdktv kl
//
LOCUS       XP_061013110            1192 aa            linear   MAM 02-DEC-2023
DEFINITION  probable phospholipid-transporting ATPase IM isoform X1 [Dama
            dama].
ACCESSION   XP_061013110
VERSION     XP_061013110.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157127.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1192
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1192
                     /product="probable phospholipid-transporting ATPase IM
                     isoform X1"
                     /calculated_mol_wt=135438
     Region          30..973
                     /region_name="P-type_ATPase_APLT_Dnf-like"
                     /note="Aminophospholipid translocases (APLTs), similar to
                     Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2,
                     -10D, -11B, -11C; cd02073"
                     /db_xref="CDD:319770"
     Site            order(392..394,537,560..562,627,674..676,789,792,795,815,
                     818)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:319770"
     CDS             1..1192
                     /gene="ATP8B4"
                     /coded_by="XM_061157127.1:164..3742"
                     /db_xref="GeneID:133066250"
ORIGIN      
        1 mfcskkksfe verivkandr eynekflykd nrihtskyni ltflpinlfe qfqrvanayf
       61 lfllilqlip eissltwftt ivplvlvvtm tavkdatddy frhksdnqvn nrqsevlids
      121 klqnekwmnv kvgdiiklen nqfvaadlll lsssephglc yietaeldge tnlkvrhals
      181 vtselgadts rlakfdgivv ceapnnkldk ftgvlswkgs khslnnekii lrgcvlrnts
      241 wcfgmvifag pdtklmqnsg ktkfkrtsid rlmntlvlwi fgfliclgti laignsiwen
      301 qvgdqfrtfl fwnegeknsv fsgfltfwsy iiilntvvpi slyvsvevir lghsyfinwd
      361 rkmyysrkat paeartttln eelgqieyvf sdktgtltqn imtfkkcsin griygevhdd
      421 lgqktdmtkk ketvgfsvsp qadrtfqffd hhlmesielg dpkvheflrl lalchtvmse
      481 ensagqliyq vqspdegalv taaknlgfif ksrtpetiti eelgtlvtyq llafldfnnf
      541 rkrmsvivrn pegqiklysk gadtilferl hpsnedlltl tsdhlsefag eglrtlaiay
      601 rdlddkyfre whkmledant atderderia glyeeierdl mllgataved klqdgvietv
      661 tslslaniki wvltgdkqet ainigyacnm ltddmndvfi iagntaaevr eelrkakenl
      721 fgqnrsfsng hvvfekkqsl eldsvveetv tgdyaliing hslahalesd vkndllelac
      781 mcktvvccrv tplqkaqvve lvkkyrnavt laigdgandv smiksahigv gisgqeglqa
      841 vlasdysfaq frylqrlllv hgrwsyvrmc kflcyffykn faftlvhfwf gffcgfsaqt
      901 vydqwfitlf nivytslpvl amgifdqdvs dqnsmdypql ykpgqlnllf nkhefficma
      961 hgiytslalf fipygafynm agddgqhtad yqsfavtmat slvivvsvqi aldtsywtvi
     1021 nhvfiwgsia tyfsilftmh sngifglfpn qfpfvgnarh sltqkciwlv illttvasvm
     1081 pvvafrflkv dlfptlsdqi rqwqkaqkka rplrsrkpqt rrsssrrsgy afahqegyge
     1141 litsgknmra knpppmsgle ktlynstswi enlckkttdt vssfsqdktv kl
//
LOCUS       XP_061013111            1192 aa            linear   MAM 02-DEC-2023
DEFINITION  probable phospholipid-transporting ATPase IM isoform X1 [Dama
            dama].
ACCESSION   XP_061013111
VERSION     XP_061013111.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157128.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1192
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1192
                     /product="probable phospholipid-transporting ATPase IM
                     isoform X1"
                     /calculated_mol_wt=135438
     Region          30..973
                     /region_name="P-type_ATPase_APLT_Dnf-like"
                     /note="Aminophospholipid translocases (APLTs), similar to
                     Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2,
                     -10D, -11B, -11C; cd02073"
                     /db_xref="CDD:319770"
     Site            order(392..394,537,560..562,627,674..676,789,792,795,815,
                     818)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:319770"
     CDS             1..1192
                     /gene="ATP8B4"
                     /coded_by="XM_061157128.1:61..3639"
                     /db_xref="GeneID:133066250"
ORIGIN      
        1 mfcskkksfe verivkandr eynekflykd nrihtskyni ltflpinlfe qfqrvanayf
       61 lfllilqlip eissltwftt ivplvlvvtm tavkdatddy frhksdnqvn nrqsevlids
      121 klqnekwmnv kvgdiiklen nqfvaadlll lsssephglc yietaeldge tnlkvrhals
      181 vtselgadts rlakfdgivv ceapnnkldk ftgvlswkgs khslnnekii lrgcvlrnts
      241 wcfgmvifag pdtklmqnsg ktkfkrtsid rlmntlvlwi fgfliclgti laignsiwen
      301 qvgdqfrtfl fwnegeknsv fsgfltfwsy iiilntvvpi slyvsvevir lghsyfinwd
      361 rkmyysrkat paeartttln eelgqieyvf sdktgtltqn imtfkkcsin griygevhdd
      421 lgqktdmtkk ketvgfsvsp qadrtfqffd hhlmesielg dpkvheflrl lalchtvmse
      481 ensagqliyq vqspdegalv taaknlgfif ksrtpetiti eelgtlvtyq llafldfnnf
      541 rkrmsvivrn pegqiklysk gadtilferl hpsnedlltl tsdhlsefag eglrtlaiay
      601 rdlddkyfre whkmledant atderderia glyeeierdl mllgataved klqdgvietv
      661 tslslaniki wvltgdkqet ainigyacnm ltddmndvfi iagntaaevr eelrkakenl
      721 fgqnrsfsng hvvfekkqsl eldsvveetv tgdyaliing hslahalesd vkndllelac
      781 mcktvvccrv tplqkaqvve lvkkyrnavt laigdgandv smiksahigv gisgqeglqa
      841 vlasdysfaq frylqrlllv hgrwsyvrmc kflcyffykn faftlvhfwf gffcgfsaqt
      901 vydqwfitlf nivytslpvl amgifdqdvs dqnsmdypql ykpgqlnllf nkhefficma
      961 hgiytslalf fipygafynm agddgqhtad yqsfavtmat slvivvsvqi aldtsywtvi
     1021 nhvfiwgsia tyfsilftmh sngifglfpn qfpfvgnarh sltqkciwlv illttvasvm
     1081 pvvafrflkv dlfptlsdqi rqwqkaqkka rplrsrkpqt rrsssrrsgy afahqegyge
     1141 litsgknmra knpppmsgle ktlynstswi enlckkttdt vssfsqdktv kl
//
LOCUS       XP_061013112            1056 aa            linear   MAM 02-DEC-2023
DEFINITION  probable phospholipid-transporting ATPase IM isoform X2 [Dama
            dama].
ACCESSION   XP_061013112
VERSION     XP_061013112.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157129.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1056
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1056
                     /product="probable phospholipid-transporting ATPase IM
                     isoform X2"
                     /calculated_mol_wt=120075
     Region          30..837
                     /region_name="Haloacid Dehalogenase-like Hydrolases"
                     /note="The haloacid dehalogenase (HAD) superfamily
                     includes carbon and phosphorus hydrolases such as
                     2-haloalkonoate dehalogenase, epoxide hydrolase,
                     phosphoserine phosphatase, phosphomannomutase,
                     phosphoglycolate phosphatase, P-type ATPase, among others.
                     These...; cl21460"
                     /db_xref="CDD:473868"
     Region          <757..959
                     /region_name="PhoLip_ATPase_C"
                     /note="Phospholipid-translocating P-type ATPase
                     C-terminal; pfam16212"
                     /db_xref="CDD:465071"
     CDS             1..1056
                     /gene="ATP8B4"
                     /coded_by="XM_061157129.1:197..3367"
                     /db_xref="GeneID:133066250"
ORIGIN      
        1 mfcskkksfe verivkandr eynekflykd nrihtskyni ltflpinlfe qfqrvanayf
       61 lfllilqlip eissltwftt ivplvlvvtm tavkdatddy frhksdnqvn nrqsevlids
      121 klqnekwmnv kvgdiiklen nqfvaadlll lsssephglc yietaeldge tnlkvrhals
      181 vtselgadts rlakfdgivv ceapnnkldk ftgvlswkgs khslnnekii lrgcvlrnts
      241 wcfgmvifag pdtklmqnsg ktkfkrtsid rlmntlvlwi fgfliclgti laignsiwen
      301 qvgdqfrtfl fwnegeknsv fsgfltfwsy iiilntvvpi slyvsvevir lghsyfinwd
      361 rkmyysrkat paeartttln eelgqieyvf sdktgtltqn imtfkkcsin griygevhdd
      421 lgqktdmtkk ketvgfsvsp qadrtfqffd hhlmesielg dpkvheflrl lalchtvmse
      481 ensagqliyq vqspdegalv taaknlgfif ksrtpetiti eelgtlvtyq llafldfnnf
      541 rkrmsvivrn pegqiklysk gadtilferl hpsnedlltl tsdhlsefag eglrtlaiay
      601 rdlddkyfre whkmledant atderderia glyeeierdl mllgataved klqdgvietv
      661 tslslaniki wvltgdkqet ainigyacnm ltddmndvfi iagntaaevr eelrkakenl
      721 fgqnrsfsng hvvfekkqsl eldsvveetv tgdyaliing hsltvydqwf itlfnivyts
      781 lpvlamgifd qdvsdqnsmd ypqlykpgql nllfnkheff icmahgiyts lalffipyga
      841 fynmagddgq htadyqsfav tmatslvivv svqialdtsy wtvinhvfiw gsiatyfsil
      901 ftmhsngifg lfpnqfpfvg narhsltqkc iwlvillttv asvmpvvafr flkvdlfptl
      961 sdqirqwqka qkkarplrsr kpqtrrsssr rsgyafahqe gygelitsgk nmraknpppm
     1021 sglektlyns tswienlckk ttdtvssfsq dktvkl
//
LOCUS       XP_061013113             620 aa            linear   MAM 02-DEC-2023
DEFINITION  long-chain fatty acid transport protein 2 [Dama dama].
ACCESSION   XP_061013113
VERSION     XP_061013113.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157130.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..620
                     /product="long-chain fatty acid transport protein 2"
                     /calculated_mol_wt=70240
     Region          74..610
                     /region_name="hsFATP2a_ACSVL_like"
                     /note="Fatty acid transport proteins (FATP) including
                     hsFATP2, hsFATP5, and hsFATP6, and similar proteins;
                     cd05938"
                     /db_xref="CDD:341261"
     Site            order(222,225..230,232..233)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341261"
     Site            order(225,339..340,360..365,465,477,480,491,572)
                     /site_type="other"
                     /note="putative AMP binding site [chemical binding]"
                     /db_xref="CDD:341261"
     Site            order(225,264..265,321,323..324,327,339..340,360..365,465,
                     477,480,488..491,553)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:341261"
     Site            order(264,323..324,327,339,488..490,544,553)
                     /site_type="other"
                     /note="putative CoA binding site [chemical binding]"
                     /db_xref="CDD:341261"
     CDS             1..620
                     /gene="SLC27A2"
                     /coded_by="XM_061157130.1:134..1996"
                     /db_xref="GeneID:133066252"
ORIGIN      
        1 mlpvvyavla gllmlpllvn lccpyffqdl ryflrvagva rrarsngqrr pvrtillafl
       61 ekvqqtphkp fvlfrdetlt yaqvdrrsnq varalrdhlg lrqgdcvaif msnepayvwl
      121 wlglmklgca maclncnirg ksllhcfqcs gakvllvspe lqaaveevlp slkkddvavy
      181 yvsrtsntdg vnsfldkvde vssepvpesw rsevtfftpa lyiytsgttg lpkaakinhh
      241 riwygiglal aceitendvi ytplplyhsa alliglhgci vtgatlvlrt kfsasqfwdd
      301 crkynitviq yigellrylc ncpqkpndrd hkvrlalgng lradvwkefi rrfgdinine
      361 fyastegnig fmnytrkiga vgrvnylqrk vinyelikyd vekdepvrdg ngycikvpkg
      421 epgllvckit qftpfngyag gksqtekkkl rdvfkkgdly fnsgdllmid henfiyfhdr
      481 vgdtfrwkge nvattevadt vglvdfveev nvygvsvpgh egrigmasik ikadhefdgr
      541 klfkhvvdyl psyarprflr iqdtieitgt fkhrkvtlve egfnpavikd alyflddkae
      601 myvpmtediy naisdkilkl
//
LOCUS       XP_061013114             658 aa            linear   MAM 02-DEC-2023
DEFINITION  histidine decarboxylase [Dama dama].
ACCESSION   XP_061013114
VERSION     XP_061013114.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157131.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..658
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..658
                     /product="histidine decarboxylase"
                     /calculated_mol_wt=73666
     Region          36..414
                     /region_name="Pyridoxal_deC"
                     /note="Pyridoxal-dependent decarboxylase conserved domain;
                     pfam00282"
                     /db_xref="CDD:395219"
     Site            order(150..151,154,244,273,276,302,305)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]"
                     /db_xref="CDD:99743"
     Site            305
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99743"
     CDS             1..658
                     /gene="HDC"
                     /coded_by="XM_061157131.1:1390..3366"
                     /db_xref="GeneID:133066253"
ORIGIN      
        1 mmepeeyrer gkemvdyicq ylttvrerrv tpdvrpgylr aqlpesapve pdswdsifgd
       61 ieriimpgvv hwqsphmhay ypaltswpsl lgdmladain clgftwassp actelemnvm
      121 dwlakmlglp ehflhhhpgs qgggvlqstv sestlialla arknkilemk asepeadesf
      181 lnarlvayas dqahssveka glislvkmkf lpvdenfslr gealqkaike drerglvpvf
      241 vcatlgttgv cafdclselg picaheglwl hidaayagta flcpefrgfl kgieyadsft
      301 fnpskwmmvh fdctgfwvkd kyklqqtfsv dpvylrhads gvatdfmhwq iplsrrfrsi
      361 klwfvirsfg vknlqahvrh gtemakyfes lvrndpffei pakrhlglvv frlkgpnclt
      421 esvlkeiaka grlflipati qdkliirftv tsqfttrddi lrdwnliqda atlilsqhct
      481 sqpspqganl ilqtrgpkal akemsfppvn gagddpahfs kivkqpprvg aspvsrhlet
      541 llhppddcfs eeapdvtehk lssflfsyls vqnkkkavrs lscnsvpvsa qkqlttegsv
      601 knggssrvri fsrfpeemmm lkksafkkli kfysvpnfpe cssqcglqlp ccplqamv
//
LOCUS       XP_061013115             395 aa            linear   MAM 02-DEC-2023
DEFINITION  GA-binding protein subunit beta-1 isoform X1 [Dama dama].
ACCESSION   XP_061013115
VERSION     XP_061013115.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157132.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..395
                     /product="GA-binding protein subunit beta-1 isoform X1"
                     /calculated_mol_wt=42352
     Region          <10..179
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          10..35
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          38..68
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(39,43..44,47..49,51..52,56,59,68,70,72,76..77,
                     80..82,84..85,89,92,101,103,105,109..110,113..115,
                     117..118,122,125)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          70..101
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          103..133
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          335..382
                     /region_name="MobB_NDR_LATS-like"
                     /note="Mob-binding domain found in the NDR/LATS family
                     serine/threonine protein kinases; cl45907"
                     /db_xref="CDD:459252"
     CDS             1..395
                     /gene="GABPB1"
                     /coded_by="XM_061157132.1:22..1209"
                     /db_xref="GeneID:133066254"
ORIGIN      
        1 mslvdlgkkl leaaragqdd evrilmanga pfttdwlgts plhlaaqygh ysttevllra
       61 gvsrdartkv drtplhmaas eghasivevl lkhgadvnak dmlkmtalhw atehnhqevv
      121 ellikygadv htqskfckta fdisidngne dlaeilqiam qnqintnpes pdtvtihaat
      181 pqfiigpggv vnltglvsse nsskatdetg vsavqfgnss tsvlatlaal aeasaplsns
      241 setpvvatee vvtaesvdga iqqvvssggq qvitivtdgi qlgnlhsipt sgigqpiivt
      301 mpdgqqvltv patdiaeetv iseeppakrq cieiienrve saeieereal qkqldeanre
      361 aqkyrqqllk keqeaeayrq kleamtrlqt nkeav
//
LOCUS       XP_061013116             394 aa            linear   MAM 02-DEC-2023
DEFINITION  GA-binding protein subunit beta-1 isoform X2 [Dama dama].
ACCESSION   XP_061013116
VERSION     XP_061013116.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157133.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..394
                     /product="GA-binding protein subunit beta-1 isoform X2"
                     /calculated_mol_wt=42253
     Region          <10..179
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          10..35
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          38..68
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(39,43..44,47..49,51..52,56,59,68,70,72,76..77,
                     80..82,84..85,89,92,101,103,105,109..110,113..115,
                     117..118,122,125)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          70..101
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          103..133
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          334..381
                     /region_name="MobB_NDR_LATS-like"
                     /note="Mob-binding domain found in the NDR/LATS family
                     serine/threonine protein kinases; cl45907"
                     /db_xref="CDD:459252"
     CDS             1..394
                     /gene="GABPB1"
                     /coded_by="XM_061157133.1:23..1207"
                     /db_xref="GeneID:133066254"
ORIGIN      
        1 mslvdlgkkl leaaragqdd evrilmanga pfttdwlgts plhlaaqygh ysttevllra
       61 gvsrdartkv drtplhmaas eghasivevl lkhgadvnak dmlkmtalhw atehnhqevv
      121 ellikygadv htqskfckta fdisidngne dlaeilqiam qnqintnpes pdtvtihaat
      181 pqfiigpggv vnltglvsse nsskatdetg vsavqfgnss tsvlatlaal aeasaplsns
      241 setpvateev vtaesvdgai qqvvssggqq vitivtdgiq lgnlhsipts gigqpiivtm
      301 pdgqqvltvp atdiaeetvi seeppakrqc ieiienrves aeieerealq kqldeanrea
      361 qkyrqqllkk eqeaeayrqk leamtrlqtn keav
//
LOCUS       XP_061013117             395 aa            linear   MAM 02-DEC-2023
DEFINITION  GA-binding protein subunit beta-1 isoform X1 [Dama dama].
ACCESSION   XP_061013117
VERSION     XP_061013117.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157134.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..395
                     /product="GA-binding protein subunit beta-1 isoform X1"
                     /calculated_mol_wt=42352
     Region          <10..179
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          10..35
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          38..68
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(39,43..44,47..49,51..52,56,59,68,70,72,76..77,
                     80..82,84..85,89,92,101,103,105,109..110,113..115,
                     117..118,122,125)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          70..101
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          103..133
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          335..382
                     /region_name="MobB_NDR_LATS-like"
                     /note="Mob-binding domain found in the NDR/LATS family
                     serine/threonine protein kinases; cl45907"
                     /db_xref="CDD:459252"
     CDS             1..395
                     /gene="GABPB1"
                     /coded_by="XM_061157134.1:215..1402"
                     /db_xref="GeneID:133066254"
ORIGIN      
        1 mslvdlgkkl leaaragqdd evrilmanga pfttdwlgts plhlaaqygh ysttevllra
       61 gvsrdartkv drtplhmaas eghasivevl lkhgadvnak dmlkmtalhw atehnhqevv
      121 ellikygadv htqskfckta fdisidngne dlaeilqiam qnqintnpes pdtvtihaat
      181 pqfiigpggv vnltglvsse nsskatdetg vsavqfgnss tsvlatlaal aeasaplsns
      241 setpvvatee vvtaesvdga iqqvvssggq qvitivtdgi qlgnlhsipt sgigqpiivt
      301 mpdgqqvltv patdiaeetv iseeppakrq cieiienrve saeieereal qkqldeanre
      361 aqkyrqqllk keqeaeayrq kleamtrlqt nkeav
//
LOCUS       XP_061013118             395 aa            linear   MAM 02-DEC-2023
DEFINITION  GA-binding protein subunit beta-1 isoform X1 [Dama dama].
ACCESSION   XP_061013118
VERSION     XP_061013118.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157135.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..395
                     /product="GA-binding protein subunit beta-1 isoform X1"
                     /calculated_mol_wt=42352
     Region          <10..179
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          10..35
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          38..68
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(39,43..44,47..49,51..52,56,59,68,70,72,76..77,
                     80..82,84..85,89,92,101,103,105,109..110,113..115,
                     117..118,122,125)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          70..101
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          103..133
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          335..382
                     /region_name="MobB_NDR_LATS-like"
                     /note="Mob-binding domain found in the NDR/LATS family
                     serine/threonine protein kinases; cl45907"
                     /db_xref="CDD:459252"
     CDS             1..395
                     /gene="GABPB1"
                     /coded_by="XM_061157135.1:131..1318"
                     /db_xref="GeneID:133066254"
ORIGIN      
        1 mslvdlgkkl leaaragqdd evrilmanga pfttdwlgts plhlaaqygh ysttevllra
       61 gvsrdartkv drtplhmaas eghasivevl lkhgadvnak dmlkmtalhw atehnhqevv
      121 ellikygadv htqskfckta fdisidngne dlaeilqiam qnqintnpes pdtvtihaat
      181 pqfiigpggv vnltglvsse nsskatdetg vsavqfgnss tsvlatlaal aeasaplsns
      241 setpvvatee vvtaesvdga iqqvvssggq qvitivtdgi qlgnlhsipt sgigqpiivt
      301 mpdgqqvltv patdiaeetv iseeppakrq cieiienrve saeieereal qkqldeanre
      361 aqkyrqqllk keqeaeayrq kleamtrlqt nkeav
//
LOCUS       XP_061013119             383 aa            linear   MAM 02-DEC-2023
DEFINITION  GA-binding protein subunit beta-1 isoform X3 [Dama dama].
ACCESSION   XP_061013119
VERSION     XP_061013119.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157136.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..383
                     /product="GA-binding protein subunit beta-1 isoform X3"
                     /calculated_mol_wt=41190
     Region          <10..179
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          10..35
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          38..68
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(39,43..44,47..49,51..52,56,59,68,70,72,76..77,
                     80..82,84..85,89,92,101,103,105,109..110,113..115,
                     117..118,122,125)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          70..101
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          103..133
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          323..370
                     /region_name="MobB_NDR_LATS-like"
                     /note="Mob-binding domain found in the NDR/LATS family
                     serine/threonine protein kinases; cl45907"
                     /db_xref="CDD:459252"
     CDS             1..383
                     /gene="GABPB1"
                     /coded_by="XM_061157136.1:22..1173"
                     /db_xref="GeneID:133066254"
ORIGIN      
        1 mslvdlgkkl leaaragqdd evrilmanga pfttdwlgts plhlaaqygh ysttevllra
       61 gvsrdartkv drtplhmaas eghasivevl lkhgadvnak dmlkmtalhw atehnhqevv
      121 ellikygadv htqskfckta fdisidngne dlaeilqiam qnqintnpes pdtvtihaat
      181 pqfiigpggv vnltdetgvs avqfgnssts vlatlaalae asaplsnsse tpvvateevv
      241 taesvdgaiq qvvssggqqv itivtdgiql gnlhsiptsg igqpiivtmp dgqqvltvpa
      301 tdiaeetvis eeppakrqci eiienrvesa eieerealqk qldeanreaq kyrqqllkke
      361 qeaeayrqkl eamtrlqtnk eav
//
LOCUS       XP_061013120             382 aa            linear   MAM 02-DEC-2023
DEFINITION  GA-binding protein subunit beta-1 isoform X4 [Dama dama].
ACCESSION   XP_061013120
VERSION     XP_061013120.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157137.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..382
                     /product="GA-binding protein subunit beta-1 isoform X4"
                     /calculated_mol_wt=41091
     Region          <10..179
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          10..35
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          38..68
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(39,43..44,47..49,51..52,56,59,68,70,72,76..77,
                     80..82,84..85,89,92,101,103,105,109..110,113..115,
                     117..118,122,125)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          70..101
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          103..133
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          322..369
                     /region_name="MobB_NDR_LATS-like"
                     /note="Mob-binding domain found in the NDR/LATS family
                     serine/threonine protein kinases; cl45907"
                     /db_xref="CDD:459252"
     CDS             1..382
                     /gene="GABPB1"
                     /coded_by="XM_061157137.1:22..1170"
                     /db_xref="GeneID:133066254"
ORIGIN      
        1 mslvdlgkkl leaaragqdd evrilmanga pfttdwlgts plhlaaqygh ysttevllra
       61 gvsrdartkv drtplhmaas eghasivevl lkhgadvnak dmlkmtalhw atehnhqevv
      121 ellikygadv htqskfckta fdisidngne dlaeilqiam qnqintnpes pdtvtihaat
      181 pqfiigpggv vnltdetgvs avqfgnssts vlatlaalae asaplsnsse tpvateevvt
      241 aesvdgaiqq vvssggqqvi tivtdgiqlg nlhsiptsgi gqpiivtmpd gqqvltvpat
      301 diaeetvise eppakrqcie iienrvesae ieerealqkq ldeanreaqk yrqqllkkeq
      361 eaeayrqkle amtrlqtnke av
//
LOCUS       XP_061013121             361 aa            linear   MAM 02-DEC-2023
DEFINITION  GA-binding protein subunit beta-1 isoform X5 [Dama dama].
ACCESSION   XP_061013121
VERSION     XP_061013121.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157138.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..361
                     /product="GA-binding protein subunit beta-1 isoform X5"
                     /calculated_mol_wt=37964
     Region          <10..179
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          10..35
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          38..68
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(39,43..44,47..49,51..52,56,59,68,70,72,76..77,
                     80..82,84..85,89,92,101,103,105,109..110,113..115,
                     117..118,122,125)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          70..101
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          103..133
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..361
                     /gene="GABPB1"
                     /coded_by="XM_061157138.1:23..1108"
                     /db_xref="GeneID:133066254"
ORIGIN      
        1 mslvdlgkkl leaaragqdd evrilmanga pfttdwlgts plhlaaqygh ysttevllra
       61 gvsrdartkv drtplhmaas eghasivevl lkhgadvnak dmlkmtalhw atehnhqevv
      121 ellikygadv htqskfckta fdisidngne dlaeilqiam qnqintnpes pdtvtihaat
      181 pqfiigpggv vnltglvsse nsskatdetg vsavqfgnss tsvlatlaal aeasaplsns
      241 setpvvatee vvtaesvdga iqqvvssggq qvitivtdgi qlgnlhsipt sgigqpiivt
      301 mpdgqqvltv patdiaeetv iseeppakrq cieiienrve saeievrsll pgerssseta
      361 g
//
LOCUS       XP_061013123            1866 aa            linear   MAM 02-DEC-2023
DEFINITION  transient receptor potential cation channel subfamily M member 7
            [Dama dama].
ACCESSION   XP_061013123
VERSION     XP_061013123.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157140.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1866
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1866
                     /product="transient receptor potential cation channel
                     subfamily M member 7"
                     /calculated_mol_wt=212707
     Region          106..371
                     /region_name="LSDAT_euk"
                     /note="SLOG in TRPM; pfam18139"
                     /db_xref="CDD:465665"
     Region          <722..1172
                     /region_name="TRPV"
                     /note="Transient Receptor Potential channel, Vanilloid
                     subfamily (TRPV); cl40437"
                     /db_xref="CDD:454755"
     Region          1194..1249
                     /region_name="TRPM_tetra"
                     /note="tetramerization domain of TRPM; pfam16519"
                     /db_xref="CDD:465156"
     Region          1581..1819
                     /region_name="Alpha_kinase_ChaK1_TRMP7"
                     /note="Alpha-kinase domain of channel kinase 1, also
                     called transient receptor potential cation channel
                     subfamily M member 7; cd16971"
                     /db_xref="CDD:341221"
     Site            order(1620..1625,1627,1647,1649,1704,1721..1724,1768,1770,
                     1778)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:341221"
     CDS             1..1866
                     /gene="TRPM7"
                     /coded_by="XM_061157140.1:131..5731"
                     /db_xref="GeneID:133066256"
ORIGIN      
        1 msqkswiest ltkrecvyii psskdphrcl pgcqicqqlv rcfcgrlvkq hacftaslam
       61 kysdvklgdh lnqtleewsv ekhteqsptd aygvinfqgg shsyrakyvr lsydtkpeii
      121 lqlllkewqm elpklvisvh ggmqkfelhp rikqllgkgl ikaavttgaw iltggvntgv
      181 akhvgdalke hasrssrkic tigiapwgvi enrndlvgrd vvapyqtlln plsklnvlnn
      241 lhshfilvdd gtvgkygaev rlrrelektv nqqriharig qgvpvvalif eggpnviltv
      301 leylqesppv pvvvcegtgr aadllayihk qteeggnlpd aaepdiisti kktfnfgqse
      361 avhlfqtlme cmkrkelitv fhigsdehqd idvailtall kgtnasafdq liltlawdrv
      421 diaknhvfvy gqqwlvgsle qamldalvmd rvafvkllie ngvsmhkflt iprleelynt
      481 kqgptnpmlf hlvrdvkqgn lppgykitli diglvieylm ggtyrctytr krfrliynsl
      541 ggnnrrsgrn tssstpqlrk sqesfgnrad kkektrhnhf iktaqpyrpk idtaveegkk
      601 krtkdeivdi ddpetkrfpy plnelliwac lmkrqlmarf lwqhgeesma kalvackiyr
      661 smayeakqsd lvddtseelk qysndfgqla velleqsfrq detmamkllt yelknwsnst
      721 clklavssrl rpfvahtctq mllsdmwmgr lnmrknswyk vilsilvppa ilmleyktka
      781 emshipqsqd ahqmtmedse nnfqniaeei pmevfkevrl ldknegknem eiqikskklp
      841 itrkfyafyh apivkfwfnt laylgflmly tfvvlvqmer lpsvqewivi ayiftyavek
      901 vreifmseag kisqkikvwf sdyfnisdti aiisffigfg lrfgakwnfe naydnhvfva
      961 grliyclnii fwyvrlldfl avnqqagpyv mmigkmvanm fyivvimalv llsfgvprka
     1021 ilypreapsw tlakdivfhp ywmifgevya yeidvcands tishicgpgt wltpflqavy
     1081 lfvqyiimvn lliaffnnvy lqvkaisniv wkyqryhfim ayhekpvlpp pliilshivs
     1141 lfccickrrk kdktsdgpkl flteedqkkl hdfeeqcvem yfnekddkfh sgseerirvt
     1201 ferveqmciq vkevgdrvny ikrslqslds qighlqdlsa ltvdtlktlt aqkaseaskv
     1261 hneitrelsi skhlaqnlid dgpvrpsvwk khsvvntlss slpqgglesn npflcnifmk
     1321 dekdsqcnif gqdlpvipqr kefsfpeags scsalfpsav sppelrqrih gvetlkmfsk
     1381 nqkpgnssns iphlsspptk ffvstpsqps ckghletvtk dqetvcskaa egdniefgaf
     1441 vghrdsmdlq rfketsnkik emlsndipse ntlkhvssha gftechktsl plhleqvess
     1501 srrssteeth evdskaallp dwlqdrpsnr emppeegtln glaspfkpvm dtnyyysave
     1561 rnnlmrlsqs ipftpvpprg epvtvyrlee sspnilnnsm sswsqlglca kieflskeem
     1621 ggglrravkv qctwsehdil ksghlyiiks flpevintws siykedtvlh lclreiqqqr
     1681 aaqkltfafn qmkpksipys prflevflly chsagqwfav eecmtgefrk ynnnngdeii
     1741 ptntleeiml afshwtyeyt rgellvldlq gvgesltdps vikaeekrsc dmvfgpanlg
     1801 edaiknfrak hhcnsccrkl klpdlkrndy tpdkiifpqd epsdltlqpg nstkesestn
     1861 sirlml
//
LOCUS       XP_061013124            1086 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin carboxyl-terminal hydrolase 8 isoform X1 [Dama dama].
ACCESSION   XP_061013124
VERSION     XP_061013124.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157141.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1086
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1086
                     /product="ubiquitin carboxyl-terminal hydrolase 8 isoform
                     X1"
                     /calculated_mol_wt=124115
     Region          6..116
                     /region_name="USP8_dimer"
                     /note="USP8 dimerization domain; pfam08969"
                     /db_xref="CDD:462647"
     Region          192..304
                     /region_name="Rhodanese"
                     /note="Rhodanese-like domain; pfam00581"
                     /db_xref="CDD:425764"
     Region          374..>624
                     /region_name="tolA_full"
                     /note="TolA protein; TIGR02794"
                     /db_xref="CDD:274303"
     Region          745..1074
                     /region_name="UCH"
                     /note="Ubiquitin carboxyl-terminal hydrolase; pfam00443"
                     /db_xref="CDD:425685"
     Site            order(749,754,1035,1053)
                     /site_type="active"
                     /db_xref="CDD:239139"
     CDS             1..1086
                     /gene="USP8"
                     /coded_by="XM_061157141.1:220..3480"
                     /db_xref="GeneID:133066257"
ORIGIN      
        1 mpavasvpke lylssslkdl nkktevkpek istknyvqsa lkifktaees rldrdeeray
       61 vlymkyvtvy nlikkrpdfk qqqdyfhsil gpanikkaie eaerlseslk lryeeaevrk
      121 kleekdrqek eqlqkqkkqe aereddgtsd ksslekvlda kdktqkinge kseknettek
      181 gaitakelyt mmmdknisli imdarrmqdy ldshisdsls vpeeaispgv tasrieanlp
      241 ddskdtwkkr gsvdyvvlld wfssakdlql gttlrslkda lfkweskavl hkeplvlegg
      301 yenwllcypq yttnakvtpp prgkneevsv sldftypsle dsvpskptaq mippieisen
      361 telinsqner mgplnisapv epiaasksdv spiiqpvpil knipqidrtk kpaiklpedh
      421 riksestdhe eqspqsekvv pdrstkpvfp pptamltdee karihaetal lmeknkqeke
      481 lrerqqeeqk erlrreeqeq kdrkeqeaee neitekqqka eqmerkeseq arkedketsa
      541 krvreitgik rqsksehett dakksvedrg krcptpevqk rstgdvphas vagdsssgks
      601 repltrarse emgrvvpglp sgwakfldpi tgtfryyhsp tntvhmyppe mapssappst
      661 ppthkakpqi paerdrepsk lkrsysspdi tqaiqeeekr rptvtpavnr enkptsypka
      721 eitrlsasqi rnlnpvfggs gpaltglrnl gntcymnsil qclcntphla dyfnrncyqd
      781 dinrsnllgh kgevaeefgi imkalwtgqy ryispkdfki tigkindqfa gysqqdsqel
      841 llflmdglhe dlnkadnrkr hkeenndhld dfkaaehawq khkqlnesii valfqgqfks
      901 tvqcltchkk srtfeafmyl slplastskc tlqdclrlfs keekltdnnr fycshcrarr
      961 dslkkieiwk lppvllvhlk rfsydgrwkq klqtsvdfpl enldlsqyli gpknnlkkyn
     1021 lfsvsnhygg ldgghytayc knaarqrwfk fddhevsdis issvkssaay ilfytslgpr
     1081 itdvat
//
LOCUS       XP_061013125            1086 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin carboxyl-terminal hydrolase 8 isoform X1 [Dama dama].
ACCESSION   XP_061013125
VERSION     XP_061013125.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157142.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1086
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1086
                     /product="ubiquitin carboxyl-terminal hydrolase 8 isoform
                     X1"
                     /calculated_mol_wt=124115
     Region          6..116
                     /region_name="USP8_dimer"
                     /note="USP8 dimerization domain; pfam08969"
                     /db_xref="CDD:462647"
     Region          192..304
                     /region_name="Rhodanese"
                     /note="Rhodanese-like domain; pfam00581"
                     /db_xref="CDD:425764"
     Region          374..>624
                     /region_name="tolA_full"
                     /note="TolA protein; TIGR02794"
                     /db_xref="CDD:274303"
     Region          745..1074
                     /region_name="UCH"
                     /note="Ubiquitin carboxyl-terminal hydrolase; pfam00443"
                     /db_xref="CDD:425685"
     Site            order(749,754,1035,1053)
                     /site_type="active"
                     /db_xref="CDD:239139"
     CDS             1..1086
                     /gene="USP8"
                     /coded_by="XM_061157142.1:273..3533"
                     /db_xref="GeneID:133066257"
ORIGIN      
        1 mpavasvpke lylssslkdl nkktevkpek istknyvqsa lkifktaees rldrdeeray
       61 vlymkyvtvy nlikkrpdfk qqqdyfhsil gpanikkaie eaerlseslk lryeeaevrk
      121 kleekdrqek eqlqkqkkqe aereddgtsd ksslekvlda kdktqkinge kseknettek
      181 gaitakelyt mmmdknisli imdarrmqdy ldshisdsls vpeeaispgv tasrieanlp
      241 ddskdtwkkr gsvdyvvlld wfssakdlql gttlrslkda lfkweskavl hkeplvlegg
      301 yenwllcypq yttnakvtpp prgkneevsv sldftypsle dsvpskptaq mippieisen
      361 telinsqner mgplnisapv epiaasksdv spiiqpvpil knipqidrtk kpaiklpedh
      421 riksestdhe eqspqsekvv pdrstkpvfp pptamltdee karihaetal lmeknkqeke
      481 lrerqqeeqk erlrreeqeq kdrkeqeaee neitekqqka eqmerkeseq arkedketsa
      541 krvreitgik rqsksehett dakksvedrg krcptpevqk rstgdvphas vagdsssgks
      601 repltrarse emgrvvpglp sgwakfldpi tgtfryyhsp tntvhmyppe mapssappst
      661 ppthkakpqi paerdrepsk lkrsysspdi tqaiqeeekr rptvtpavnr enkptsypka
      721 eitrlsasqi rnlnpvfggs gpaltglrnl gntcymnsil qclcntphla dyfnrncyqd
      781 dinrsnllgh kgevaeefgi imkalwtgqy ryispkdfki tigkindqfa gysqqdsqel
      841 llflmdglhe dlnkadnrkr hkeenndhld dfkaaehawq khkqlnesii valfqgqfks
      901 tvqcltchkk srtfeafmyl slplastskc tlqdclrlfs keekltdnnr fycshcrarr
      961 dslkkieiwk lppvllvhlk rfsydgrwkq klqtsvdfpl enldlsqyli gpknnlkkyn
     1021 lfsvsnhygg ldgghytayc knaarqrwfk fddhevsdis issvkssaay ilfytslgpr
     1081 itdvat
//
LOCUS       XP_061013126            1076 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin carboxyl-terminal hydrolase 8 isoform X2 [Dama dama].
ACCESSION   XP_061013126
VERSION     XP_061013126.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157143.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1076
                     /product="ubiquitin carboxyl-terminal hydrolase 8 isoform
                     X2"
                     /calculated_mol_wt=122988
     Region          6..116
                     /region_name="USP8_dimer"
                     /note="USP8 dimerization domain; pfam08969"
                     /db_xref="CDD:462647"
     Region          182..294
                     /region_name="Rhodanese"
                     /note="Rhodanese-like domain; pfam00581"
                     /db_xref="CDD:425764"
     Region          364..>614
                     /region_name="tolA_full"
                     /note="TolA protein; TIGR02794"
                     /db_xref="CDD:274303"
     Region          735..1064
                     /region_name="UCH"
                     /note="Ubiquitin carboxyl-terminal hydrolase; pfam00443"
                     /db_xref="CDD:425685"
     Site            order(739,744,1025,1043)
                     /site_type="active"
                     /db_xref="CDD:239139"
     CDS             1..1076
                     /gene="USP8"
                     /coded_by="XM_061157143.1:220..3450"
                     /db_xref="GeneID:133066257"
ORIGIN      
        1 mpavasvpke lylssslkdl nkktevkpek istknyvqsa lkifktaees rldrdeeray
       61 vlymkyvtvy nlikkrpdfk qqqdyfhsil gpanikkaie eaerlseslk lryeeaevrk
      121 kleekdrqek eqlqkqkkqe aereddgtsd ksslekinge kseknettek gaitakelyt
      181 mmmdknisli imdarrmqdy ldshisdsls vpeeaispgv tasrieanlp ddskdtwkkr
      241 gsvdyvvlld wfssakdlql gttlrslkda lfkweskavl hkeplvlegg yenwllcypq
      301 yttnakvtpp prgkneevsv sldftypsle dsvpskptaq mippieisen telinsqner
      361 mgplnisapv epiaasksdv spiiqpvpil knipqidrtk kpaiklpedh riksestdhe
      421 eqspqsekvv pdrstkpvfp pptamltdee karihaetal lmeknkqeke lrerqqeeqk
      481 erlrreeqeq kdrkeqeaee neitekqqka eqmerkeseq arkedketsa krvreitgik
      541 rqsksehett dakksvedrg krcptpevqk rstgdvphas vagdsssgks repltrarse
      601 emgrvvpglp sgwakfldpi tgtfryyhsp tntvhmyppe mapssappst ppthkakpqi
      661 paerdrepsk lkrsysspdi tqaiqeeekr rptvtpavnr enkptsypka eitrlsasqi
      721 rnlnpvfggs gpaltglrnl gntcymnsil qclcntphla dyfnrncyqd dinrsnllgh
      781 kgevaeefgi imkalwtgqy ryispkdfki tigkindqfa gysqqdsqel llflmdglhe
      841 dlnkadnrkr hkeenndhld dfkaaehawq khkqlnesii valfqgqfks tvqcltchkk
      901 srtfeafmyl slplastskc tlqdclrlfs keekltdnnr fycshcrarr dslkkieiwk
      961 lppvllvhlk rfsydgrwkq klqtsvdfpl enldlsqyli gpknnlkkyn lfsvsnhygg
     1021 ldgghytayc knaarqrwfk fddhevsdis issvkssaay ilfytslgpr itdvat
//
LOCUS       XP_061013127             367 aa            linear   MAM 02-DEC-2023
DEFINITION  inactive ubiquitin carboxyl-terminal hydrolase 50 [Dama dama].
ACCESSION   XP_061013127
VERSION     XP_061013127.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157144.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..367
                     /product="inactive ubiquitin carboxyl-terminal hydrolase
                     50"
                     /calculated_mol_wt=42093
     Region          39..354
                     /region_name="Peptidase_C19R"
                     /note="A subfamily of peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; cd02674"
                     /db_xref="CDD:239139"
     Site            order(42,47,314,332)
                     /site_type="active"
                     /db_xref="CDD:239139"
     CDS             1..367
                     /gene="USP50"
                     /coded_by="XM_061157144.1:225..1328"
                     /db_xref="GeneID:133066258"
ORIGIN      
        1 mlsflstwhq hsaectdhyd pcpvneaeen qphfqgvtgl rnlgntcymn ailqclcsis
       61 plveyflsgk yinslqkdcs evatafayvm tdmwlgdsdc vspeifrsal gnlypvfmkk
      121 tqqdaqefli yvlnelheal kkyhqrksye kksiprccrk miasessiit rlfegqlsys
      181 iiclkcenct yknevftvis lpipseyecs lqdclqcffq qdtltwnnqi hcsfcetkqe
      241 tavratiska pktivfhlkr fdilgtmkrk lrtdihyplt nldltpyicp ifrkhpkynl
      301 cavvnhfgdl dgghytafck nsvtqawysf ddtrvseipd tsvqtaaayl lfyscqpfsi
      361 prqkcks
//
LOCUS       XP_061013128             609 aa            linear   MAM 02-DEC-2023
DEFINITION  signal peptide peptidase-like 2A isoform X1 [Dama dama].
ACCESSION   XP_061013128
VERSION     XP_061013128.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157145.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..609
                     /product="signal peptide peptidase-like 2A isoform X1"
                     /calculated_mol_wt=66911
     Region          112..231
                     /region_name="PA_hSPPL_like"
                     /note="Protease-associated domain containing human signal
                     peptide peptidase-like (hSPPL)-like. This group contains
                     various PA domain-containing proteins similar to hSPPL2a
                     and 2b. These SPPLs are GxGD aspartic proteases. SPPL2a is
                     sorted to the late endosomes; cd02129"
                     /db_xref="CDD:239044"
     Site            192..194
                     /site_type="other"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]"
                     /db_xref="CDD:239044"
     Region          282..585
                     /region_name="Peptidase_A22B"
                     /note="Signal peptide peptidase; pfam04258"
                     /db_xref="CDD:282158"
     CDS             1..609
                     /gene="SPPL2A"
                     /coded_by="XM_061157145.1:16..1845"
                     /db_xref="GeneID:133066259"
ORIGIN      
        1 marggfrvlr agpeeevgaa aaapaaaaap verrgptlsr pateaaprra pepaplspha
       61 ppappvrsmg rqpplppaaa allwglllpl taaheailha sgngtpspsk dycmlynphw
      121 tslpstlena tstslmnltt tplcnisdip pdgiknkavv vqwgtchfle kariaqtgga
      181 eallvannsv lfppsgnkse yldvkiliaf inhkdfkdmk qtlgdniivk myspswpnfd
      241 ytmvvifvia vftvalggyw sglielenmk amtntedrem rkkkeeyftf spltviifvv
      301 iccimmvlly ffykwlvyvm iaifciasam slynclaalv rkiqwgrcti tccsksfevr
      361 lyllsglcia vavvwavfrn edrwawilqd ilgiafclnl iktlklpnfk scvillglll
      421 lydvffvfit pfitkngesi mvelaagpfg nnekndgnlv eataqpsaph eklpvvirvp
      481 klayfsvmsv clmpvsilgf gdiivpglli aycrrfdvei gssiyyvsst iayaigmilt
      541 fvvlvlmkkg qpallylvpc tlitaslvaw rrkemkkfwk gssyqmmdhl dsatneenpg
      601 tageqivqq
//
LOCUS       XP_061013129             604 aa            linear   MAM 02-DEC-2023
DEFINITION  signal peptide peptidase-like 2A isoform X2 [Dama dama].
ACCESSION   XP_061013129
VERSION     XP_061013129.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157146.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..604
                     /product="signal peptide peptidase-like 2A isoform X2"
                     /calculated_mol_wt=66679
     Region          112..231
                     /region_name="PA_hSPPL_like"
                     /note="Protease-associated domain containing human signal
                     peptide peptidase-like (hSPPL)-like. This group contains
                     various PA domain-containing proteins similar to hSPPL2a
                     and 2b. These SPPLs are GxGD aspartic proteases. SPPL2a is
                     sorted to the late endosomes; cd02129"
                     /db_xref="CDD:239044"
     Site            192..194
                     /site_type="other"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]"
                     /db_xref="CDD:239044"
     Region          282..567
                     /region_name="Peptidase_A22B"
                     /note="Signal peptide peptidase; pfam04258"
                     /db_xref="CDD:282158"
     CDS             1..604
                     /gene="SPPL2A"
                     /coded_by="XM_061157146.1:16..1830"
                     /db_xref="GeneID:133066259"
ORIGIN      
        1 marggfrvlr agpeeevgaa aaapaaaaap verrgptlsr pateaaprra pepaplspha
       61 ppappvrsmg rqpplppaaa allwglllpl taaheailha sgngtpspsk dycmlynphw
      121 tslpstlena tstslmnltt tplcnisdip pdgiknkavv vqwgtchfle kariaqtgga
      181 eallvannsv lfppsgnkse yldvkiliaf inhkdfkdmk qtlgdniivk myspswpnfd
      241 ytmvvifvia vftvalggyw sglielenmk amtntedrem rkkkeeyftf spltviifvv
      301 iccimmvlly ffykwlvyvm iaifciasam slynclaalv rkiqwgrcti tccsksfevr
      361 lyllsglcia vavvwavfrn edrwawilqd ilgiafclnl iktlklpnfk scvillglll
      421 lydvffvfit pfitkngesi mvelaagpfg nneklpvvir vpklayfsvm svclmpvsil
      481 gfgdiivpgl liaycrrfdv eigssiyyvs stiayaigmi ltfvvlvlmk kgqpallylv
      541 pctlitaslv awrrkemkkf wkgssyqysf kgavvyykhl ssflccllrr kemlddgpsg
      601 lcnk
//
LOCUS       XP_061013130             591 aa            linear   MAM 02-DEC-2023
DEFINITION  signal peptide peptidase-like 2A isoform X3 [Dama dama].
ACCESSION   XP_061013130
VERSION     XP_061013130.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157147.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..591
                     /product="signal peptide peptidase-like 2A isoform X3"
                     /calculated_mol_wt=65051
     Region          112..231
                     /region_name="PA_hSPPL_like"
                     /note="Protease-associated domain containing human signal
                     peptide peptidase-like (hSPPL)-like. This group contains
                     various PA domain-containing proteins similar to hSPPL2a
                     and 2b. These SPPLs are GxGD aspartic proteases. SPPL2a is
                     sorted to the late endosomes; cd02129"
                     /db_xref="CDD:239044"
     Site            192..194
                     /site_type="other"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]"
                     /db_xref="CDD:239044"
     Region          282..567
                     /region_name="Peptidase_A22B"
                     /note="Signal peptide peptidase; pfam04258"
                     /db_xref="CDD:282158"
     CDS             1..591
                     /gene="SPPL2A"
                     /coded_by="XM_061157147.1:16..1791"
                     /db_xref="GeneID:133066259"
ORIGIN      
        1 marggfrvlr agpeeevgaa aaapaaaaap verrgptlsr pateaaprra pepaplspha
       61 ppappvrsmg rqpplppaaa allwglllpl taaheailha sgngtpspsk dycmlynphw
      121 tslpstlena tstslmnltt tplcnisdip pdgiknkavv vqwgtchfle kariaqtgga
      181 eallvannsv lfppsgnkse yldvkiliaf inhkdfkdmk qtlgdniivk myspswpnfd
      241 ytmvvifvia vftvalggyw sglielenmk amtntedrem rkkkeeyftf spltviifvv
      301 iccimmvlly ffykwlvyvm iaifciasam slynclaalv rkiqwgrcti tccsksfevr
      361 lyllsglcia vavvwavfrn edrwawilqd ilgiafclnl iktlklpnfk scvillglll
      421 lydvffvfit pfitkngesi mvelaagpfg nneklpvvir vpklayfsvm svclmpvsil
      481 gfgdiivpgl liaycrrfdv eigssiyyvs stiayaigmi ltfvvlvlmk kgqpallylv
      541 pctlitaslv awrrkemkkf wkgssyqmmd hldsatneen pgtageqivq q
//
LOCUS       XP_061013131             536 aa            linear   MAM 02-DEC-2023
DEFINITION  signal peptide peptidase-like 2A isoform X4 [Dama dama].
ACCESSION   XP_061013131
VERSION     XP_061013131.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157148.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..536
                     /product="signal peptide peptidase-like 2A isoform X4"
                     /calculated_mol_wt=59976
     Region          26..145
                     /region_name="PA_hSPPL_like"
                     /note="Protease-associated domain containing human signal
                     peptide peptidase-like (hSPPL)-like. This group contains
                     various PA domain-containing proteins similar to hSPPL2a
                     and 2b. These SPPLs are GxGD aspartic proteases. SPPL2a is
                     sorted to the late endosomes; cd02129"
                     /db_xref="CDD:239044"
     Site            106..108
                     /site_type="other"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]"
                     /db_xref="CDD:239044"
     Region          196..499
                     /region_name="Peptidase_A22B"
                     /note="Signal peptide peptidase; pfam04258"
                     /db_xref="CDD:282158"
     CDS             1..536
                     /gene="SPPL2A"
                     /coded_by="XM_061157148.1:18..1628"
                     /db_xref="GeneID:133066259"
ORIGIN      
        1 mnmsltahea ilhasgngtp spskdycmly nphwtslpst lenatstslm nltttplcni
       61 sdippdgikn kavvvqwgtc hflekariaq tggaeallva nnsvlfppsg nkseyldvki
      121 liafinhkdf kdmkqtlgdn iivkmyspsw pnfdytmvvi fviavftval ggywsgliel
      181 enmkamtnte dremrkkkee yftfspltvi ifvviccimm vllyffykwl vyvmiaifci
      241 asamslyncl aalvrkiqwg rctitccsks fevrlyllsg lciavavvwa vfrnedrwaw
      301 ilqdilgiaf clnliktlkl pnfkscvill gllllydvff vfitpfitkn gesimvelaa
      361 gpfgnneknd gnlveataqp sapheklpvv irvpklayfs vmsvclmpvs ilgfgdiivp
      421 glliaycrrf dveigssiyy vsstiayaig miltfvvlvl mkkgqpally lvpctlitas
      481 lvawrrkemk kfwkgssyqy sfkgavvyyk hlssflccll rrkemlddgp sglcnk
//
LOCUS       XP_061013132            1138 aa            linear   MAM 02-DEC-2023
DEFINITION  AP-4 complex subunit epsilon-1 isoform X1 [Dama dama].
ACCESSION   XP_061013132
VERSION     XP_061013132.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157149.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1138
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1138
                     /product="AP-4 complex subunit epsilon-1 isoform X1"
                     /calculated_mol_wt=127891
     Region          52..596
                     /region_name="Adaptin_N"
                     /note="Adaptin N terminal region; pfam01602"
                     /db_xref="CDD:396262"
     Region          1034..1134
                     /region_name="AP4E_app_platf"
                     /note="Adaptin AP4 complex epsilon appendage platform;
                     pfam14807"
                     /db_xref="CDD:464326"
     CDS             1..1138
                     /gene="AP4E1"
                     /coded_by="XM_061157149.1:105..3521"
                     /db_xref="GeneID:133066261"
ORIGIN      
        1 msdivektlt alpglflqnq svggptaaka sfssrlgglv rgitaltskh eeekliqqel
       61 nnlkatvsap tttlkmmkec mvrliyceml gydasfgyih aiklaqqgnl lekrvgylav
      121 slflheshel llllvntvvk dlqstnlvev cmaltivsqi fpremipavl pliedklqhs
      181 keiirrkavl alykfyliap nqvqhihvkf rkalcdrdvg vmaaslhiyf rmikenssay
      241 kdltgsfvti lkqvvggklp vdfnyhsvpa pwlqiqllri lgllgkddqr tselmydvld
      301 eslrraelnh nvtyailfec vhtvysiypk sellekaakc igkfvlspki nlkylglkal
      361 tyviqqdptl alqhqmtiie cldhpdpiik retlellyri tnaqnitviv qkmleylhqs
      421 keeyiivnlv gkiaelaeky apdnawfiqt mnavfsvggd vmhpdipnnf lrllaegfdd
      481 etenqqlrly avqsyltlld venvfypqrf lqvmswvlge ysyllnketp eevitklykl
      541 lmndsisset kawiiaavtk ltpqahssni verliqeftt sldtclrqha felkhlhenv
      601 klmksllpid kscedmvvda slsfldgfva eeltqgaapy kphhqrqeek lsqekvlnfe
      661 pyglsfsssg ftgrqspagi slgsdisgns tetglketng lklegikklw gkegylpkke
      721 sktgdetevp pvpqesiime ngdqtvtkkd qsqvltqske ekekqllass lfvglgsest
      781 inllgktdti shkfrrkski ketkseettt dqniirssfs sssnvtyeed ycldnlqdrg
      841 dkelkkfsls selldseslt elplvekisn crlstpslfa dnnmevfhpp qataasvane
      901 islassllee tsehihsdlm evcnnetisv ssykiwkddc lsvvwsvfnk sglelksanl
      961 eiapaenfki teqpgcclpv ieaestknfq ysvqmekpfa egnlsgfity qvmdthsvql
     1021 efsvnlslld firplkiste dfgklwlsfa ndvkqnvkms esqaalsstl kalqqelrlh
     1081 vvdirgnegl lacqllpsip cllhfrvhgd mlalwfrssc stlpdyllyq cqkvmegs
//
LOCUS       XP_061013133            1114 aa            linear   MAM 02-DEC-2023
DEFINITION  AP-4 complex subunit epsilon-1 isoform X2 [Dama dama].
ACCESSION   XP_061013133
VERSION     XP_061013133.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157150.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1114
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1114
                     /product="AP-4 complex subunit epsilon-1 isoform X2"
                     /calculated_mol_wt=125238
     Region          54..572
                     /region_name="Adaptin_N"
                     /note="Adaptin N terminal region; pfam01602"
                     /db_xref="CDD:396262"
     Region          1010..1110
                     /region_name="AP4E_app_platf"
                     /note="Adaptin AP4 complex epsilon appendage platform;
                     pfam14807"
                     /db_xref="CDD:464326"
     CDS             1..1114
                     /gene="AP4E1"
                     /coded_by="XM_061157150.1:105..3449"
                     /db_xref="GeneID:133066261"
ORIGIN      
        1 msdivektlt alpglflqnq svggptaaka sfssrlgglv rgitaltskh kmmkecmvrl
       61 iycemlgyda sfgyihaikl aqqgnllekr vgylavslfl heshelllll vntvvkdlqs
      121 tnlvevcmal tivsqifpre mipavlplie dklqhskeii rrkavlalyk fyliapnqvq
      181 hihvkfrkal cdrdvgvmaa slhiyfrmik enssaykdlt gsfvtilkqv vggklpvdfn
      241 yhsvpapwlq iqllrilgll gkddqrtsel mydvldeslr raelnhnvty ailfecvhtv
      301 ysiypksell ekaakcigkf vlspkinlky lglkaltyvi qqdptlalqh qmtiiecldh
      361 pdpiikretl ellyritnaq nitvivqkml eylhqskeey iivnlvgkia elaekyapdn
      421 awfiqtmnav fsvggdvmhp dipnnflrll aegfddeten qqlrlyavqs yltlldvenv
      481 fypqrflqvm swvlgeysyl lnketpeevi tklykllmnd sissetkawi iaavtkltpq
      541 ahssniverl iqefttsldt clrqhafelk hlhenvklmk sllpidksce dmvvdaslsf
      601 ldgfvaeelt qgaapykphh qrqeeklsqe kvlnfepygl sfsssgftgr qspagislgs
      661 disgnstetg lketnglkle gikklwgkeg ylpkkesktg detevppvpq esiimengdq
      721 tvtkkdqsqv ltqskeekek qllasslfvg lgsestinll gktdtishkf rrkskiketk
      781 seetttdqni irssfssssn vtyeedycld nlqdrgdkel kkfslssell dsesltelpl
      841 vekisncrls tpslfadnnm evfhppqata asvaneisla sslleetseh ihsdlmevcn
      901 netisvssyk iwkddclsvv wsvfnksgle lksanleiap aenfkiteqp gcclpvieae
      961 stknfqysvq mekpfaegnl sgfityqvmd thsvqlefsv nlslldfirp lkistedfgk
     1021 lwlsfandvk qnvkmsesqa alsstlkalq qelrlhvvdi rgnegllacq llpsipcllh
     1081 frvhgdmlal wfrsscstlp dyllyqcqkv megs
//
LOCUS       XP_061013134             987 aa            linear   MAM 02-DEC-2023
DEFINITION  AP-4 complex subunit epsilon-1 isoform X3 [Dama dama].
ACCESSION   XP_061013134
VERSION     XP_061013134.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157151.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..987
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..987
                     /product="AP-4 complex subunit epsilon-1 isoform X3"
                     /calculated_mol_wt=111357
     Region          1..445
                     /region_name="Adaptin_N"
                     /note="Adaptin N terminal region; pfam01602"
                     /db_xref="CDD:396262"
     Region          883..983
                     /region_name="AP4E_app_platf"
                     /note="Adaptin AP4 complex epsilon appendage platform;
                     pfam14807"
                     /db_xref="CDD:464326"
     CDS             1..987
                     /gene="AP4E1"
                     /coded_by="XM_061157151.1:158..3121"
                     /db_xref="GeneID:133066261"
ORIGIN      
        1 maltivsqif premipavlp liedklqhsk eiirrkavla lykfyliapn qvqhihvkfr
       61 kalcdrdvgv maaslhiyfr mikenssayk dltgsfvtil kqvvggklpv dfnyhsvpap
      121 wlqiqllril gllgkddqrt selmydvlde slrraelnhn vtyailfecv htvysiypks
      181 ellekaakci gkfvlspkin lkylglkalt yviqqdptla lqhqmtiiec ldhpdpiikr
      241 etlellyrit naqnitvivq kmleylhqsk eeyiivnlvg kiaelaekya pdnawfiqtm
      301 navfsvggdv mhpdipnnfl rllaegfdde tenqqlrlya vqsyltlldv envfypqrfl
      361 qvmswvlgey syllnketpe evitklykll mndsissetk awiiaavtkl tpqahssniv
      421 erliqeftts ldtclrqhaf elkhlhenvk lmksllpidk scedmvvdas lsfldgfvae
      481 eltqgaapyk phhqrqeekl sqekvlnfep yglsfsssgf tgrqspagis lgsdisgnst
      541 etglketngl klegikklwg kegylpkkes ktgdetevpp vpqesiimen gdqtvtkkdq
      601 sqvltqskee kekqllassl fvglgsesti nllgktdtis hkfrrkskik etkseetttd
      661 qniirssfss ssnvtyeedy cldnlqdrgd kelkkfslss elldseslte lplvekisnc
      721 rlstpslfad nnmevfhppq ataasvanei slasslleet sehihsdlme vcnnetisvs
      781 sykiwkddcl svvwsvfnks glelksanle iapaenfkit eqpgcclpvi eaestknfqy
      841 svqmekpfae gnlsgfityq vmdthsvqle fsvnlslldf irplkisted fgklwlsfan
      901 dvkqnvkmse sqaalsstlk alqqelrlhv vdirgnegll acqllpsipc llhfrvhgdm
      961 lalwfrsscs tlpdyllyqc qkvmegs
//
LOCUS       XP_061013136             204 aa            linear   MAM 02-DEC-2023
DEFINITION  tumor necrosis factor alpha-induced protein 8-like protein 3 [Dama
            dama].
ACCESSION   XP_061013136
VERSION     XP_061013136.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157153.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..204
                     /product="tumor necrosis factor alpha-induced protein
                     8-like protein 3"
                     /calculated_mol_wt=23168
     Region          43..202
                     /region_name="DUF758"
                     /note="Domain of unknown function (DUF758); pfam05527"
                     /db_xref="CDD:461672"
     CDS             1..204
                     /gene="TNFAIP8L3"
                     /coded_by="XM_061157153.1:166..780"
                     /db_xref="GeneID:133066263"
ORIGIN      
        1 mdsdsgeqse gepgtaagpd vfssknlalq aqkkilskia sktvanmlid dtsseifdel
       61 ykvtkehihn kkeahkimkd likvaikigi lyrnnqfspe evvivekfrk klnqtamtiv
      121 sfyeveytfd rnvlskllhe ckdlvhelvq rhltprthgr inhvfnhfad veflstlysl
      181 dgdcrpnlkk iceginklid ekvl
//
LOCUS       XP_061013137            3057 aa            linear   MAM 02-DEC-2023
DEFINITION  dmX-like protein 2 [Dama dama].
ACCESSION   XP_061013137
VERSION     XP_061013137.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157154.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3057
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3057
                     /product="dmX-like protein 2"
                     /calculated_mol_wt=342470
     Region          61..102
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          109..171
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          174..225
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          235..268
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1170..1901
                     /region_name="Rav1p_C"
                     /note="RAVE protein 1 C terminal; pfam12234"
                     /db_xref="CDD:432413"
     Region          2787..3039
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          2831..2871
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2876..2918
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2925..2960
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2966..3002
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..3057
                     /gene="DMXL2"
                     /coded_by="XM_061157154.1:260..9433"
                     /db_xref="GeneID:133066265"
ORIGIN      
        1 mhlhqvltga vnpgdncysv gsvedvpfta ygsgcdivil asdfecvqii pgakhgniqv
       61 scvecsnqhg riaasygnav cifeplgins hkrncqlkcq wlktgqffls svtynlawdp
      121 qdnrlltatd slqlwapprd dileeeeein dkilpvlndw kciwqcktsv svhlmewspd
      181 geyfatagkd dcllkvwypm tgwkssiipq dhhevkrrqa stqfsfvyla hpravtgfsw
      241 rktskymprg svcnvlltsc hdgvcrlwae tllpedcllg eqicetttss vssnlthagk
      301 hkdriqhale tihhlknlrk gqrrssvlvt htelkpdeta thevqrhish hanalchfhi
      361 aasinpatdi pnvlvgtvfn iddgnggfvv hwlnnkefhf tssteifmqq lrklserqvd
      421 hendegdked eehsqeerer glhmkldhel sldreseagt gssehedaer egsprtyswp
      481 imsmplptvl ldrkiemlla ewnknpdmlf tihpvdgtfl vwhvkyldey npgifrqvqv
      541 sfssripvaf psgdasslsk nimmyacina akdshhspsh qdtlaegrpr gslahsgshr
      601 tnmnivaptv mmvskhidgs lnqwavtfae ksafttvltv shkfrycghr fhlndlachs
      661 vlpllltssh hnalltpead fqwdsdskls rlidpvrhik gslkqplrna atrtfhdpna
      721 iyselilwrv dpigplsytg gvselarins lhtsafsnva wlptlipsyc lgtycnsasa
      781 cfvasdgknl rlyqavvdar klldelsdpe sskligevfn ivsqqstarp gciieldait
      841 nqcgsntqll hvfqedfirg ykphkedmek keteiffqps qgyrpppfse kfflvviekd
      901 snncsilhmw hlhlksiqac lakasegvss esllsvpgqk hvdsspetsp svspmshsss
      961 ianlqtaskl ilnsrlvysq pldlpvgvev iratpsaghl ssssiypvcl apylvvttcs
     1021 dnkvrfwkcc metnlqcksd eketyhwrrw plmndegedn sstvsivgrp vavscsytgr
     1081 lavaykqpih hngfvskefs mhvcifeces tggsewaleq tihlddlvkv gsvldsrvsv
     1141 dsnlfvysks dallgkdryl ipnikhlvhl dwvskedgsh iltvgvgahi fmygrlsgiv
     1201 teqtnskdgv avitlplggs ikqgvrsrwv llrsidlvss vdgtpslpvs lswvrdgilv
     1261 vgmdcemhvy aqwkhavrfg didtdgsdae etsiqdhsaf kssmlsrksi vegtaiaddv
     1321 fcsptvvqdg glfeaahvls ptlpqyhptq llelmdlgkv rrakailshl vkciagevav
     1381 vrdadagegt krhlsrtisv sgstakdtvt igkdgtrdyt eidsipplpl yallaadqdt
     1441 tyrvseestk vpqscedhae sqpedqysel fqiqdittdd idlepekrdn kskvinlsqy
     1501 gpayfgqeha rvlsshlmhs slpgltrleq mflvaladtv attstelden rdksysgrdt
     1561 ldecglryll amrlhtcllt slpplyrvql lhqgvstchf awafhseaee elinmipaiq
     1621 rgdpqwselr amgigwwvrn intlrrciek vakasfqrnn daldaalfyl smkkkavvwg
     1681 lfrsqhdekm ttffshnfne drwrkaalkn afsllgkqrf eqsaafflla gslkdaievc
     1741 lekmediqla mviarlyesd fetsstylsi lnqkilgcqk dgsgfdcerl hpdpflrsla
     1801 ywvmkdytra ldtlleqtpk eddehqviik scnpmvfsfy nylrthplli rrnlvspegt
     1861 latvglktek nfvdkinlie rklffttana hfkvgcpvla levlskipkv tkvsalpsek
     1921 dqpdfiskki ddvpsesktl sdgdgsfgid wsnvtssqid wsqpvvriee epltldwgee
     1981 ndsaleeeed davglvmkst dvggkdrqed qktpdpnvls tpqeedhleg dtevdviaeq
     2041 lkfraclkil mtelrtlatg yevdggklrf qlynwlekei aalheicnhe svikeyaskm
     2101 yskgdsnlld qeemvdkpdi gsyerhqier rrlqakreha errkswlhkn qdllrvflsy
     2161 cslhgaqggg lasvrmelkf llqesqqett vkqlqsplpl pttlpllsas iastktvian
     2221 pvlylnnhih dilytivqmk tpphpsiddv kvhtlhslaa slsasiyqal cdshsysqte
     2281 gnqftgmayq glllsdrrrl rtesieehat pnsspaqwpg vsslinllss aqdedqpkln
     2341 vllceavvav ylsllihala tnssnelfrl aahplnnrmw aavfgggvkl vvkpqrqsen
     2401 isappvpsed idkhrrrfnm rmlvpgrpvk dttpppvpae rpsykekfip pelsmwdyfv
     2461 akpflplsds gviydsdesi hsdeeeedaf fsdiqiqehq dpnsyswall hltmvklalh
     2521 nvknffpiag lefselpvts plgiaviknl enweqilqek mdhfegpppn yintyptdls
     2581 vgagpaslrn kamlepentp fksrdssalp vkrlwhflvk qevlqetfmr yiftkkrkqs
     2641 esieehveqv kqncvaedch ikveadlgyp ggkakiihke sdmimafsin kancneivla
     2701 sthdvqeldi tsllacqsyi wigeeydres kssddidyrg stttlyqpta tsysasqvhp
     2761 ssslpwlgsg qtstgasvlm krnlhnvkrm tshpvhqyyl tgaqdgsvrm fewtrpqqlv
     2821 cfrqagnarv trlyfnsqgn kcgvadgegf lsiwqvnqta snpkpymswq chskatsdfa
     2881 fvtssslvat sghsndnrnv clwdtlitpg nslihgftch dhgatvlqya pkqqllisgg
     2941 rkgyicifdi rqrqlmrtfq ahdsaikala ldpceeyftt gsaegnikvw rltsrglihs
     3001 fknehakqsi frnlgagvmq iditqgnrif scgadgtlkt rvlpsafnip hrildil
//
LOCUS       XP_061013138             470 aa            linear   MAM 02-DEC-2023
DEFINITION  secretogranin-3 [Dama dama].
ACCESSION   XP_061013138
VERSION     XP_061013138.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157155.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..470
                     /product="secretogranin-3"
                     /calculated_mol_wt=53487
     Region          20..470
                     /region_name="SGIII"
                     /note="Secretogranin-3; pfam15467"
                     /db_xref="CDD:464732"
     CDS             1..470
                     /gene="SCG3"
                     /coded_by="XM_061157155.1:299..1711"
                     /db_xref="GeneID:133066266"
ORIGIN      
        1 mgflwtgtwi vvlvlhsspi qafpkpagsq dkplhnrels aerplneqia eaeadkikkt
       61 yppenkpges nysfvdnlnl lkaitekekn ekerqsvkis pndnklnved vdstknrrli
      121 ddydstksgl drkfqddpdg lhqldgtplt aedivqkiat riyeendrgv fdrivsklln
      181 lglitesqah tledevaevl qkliskeann yeeelnkpts ktesqtvkip eevtpmaaiq
      241 daftngende tvsntltltn glerrtktys ednfeelqyf pnfyallksi dsekeakeke
      301 tlitimktli dfvkmmvkyg tispeegvsy lenldetial qtknkleknv tdnksklfpv
      361 pseksheetd stkeeaakme keygtlkdst kdddsnprgk tdepkgktea yleairknid
      421 wlkkhnkken kdydlskmrd finqqadayv ekgildkeea daikriyssl
//
LOCUS       XP_061013139             393 aa            linear   MAM 02-DEC-2023
DEFINITION  immunoglobulin-binding protein 1-like isoform X1 [Dama dama].
ACCESSION   XP_061013139
VERSION     XP_061013139.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157156.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..393
                     /product="immunoglobulin-binding protein 1-like isoform
                     X1"
                     /calculated_mol_wt=45019
     Region          71..383
                     /region_name="TAP42"
                     /note="TAP42-like family; pfam04177"
                     /db_xref="CDD:461209"
     CDS             1..393
                     /gene="LOC133066267"
                     /coded_by="XM_061157156.1:113..1294"
                     /db_xref="GeneID:133066267"
ORIGIN      
        1 mkrkpdlkdl ftrirclsyq attagnlcsh hillgpeqkc rpliivtccn ggeemaaaee
       61 elllprlpel fetskqllde veiaaeptgs riiqdkvfkg ldllkkaaem llqldlfsqn
      121 edleeiastd lkylmvpafq gafamkqvsp nkrldhlqwa rehflnyltq cqyyhvaefe
      181 lpktktnsae nntanssmay psivamasqr qakierykqk kevehrlsal ksavesgqad
      241 dehvreyyll hlrrwigisl eeiksidqei kilrekdstk eastsqssrh drpamkpfvl
      301 trnmaqakvf gagypslasm tvndwyeqhr kfgalpdqgi akttsefkra aqqqddqehe
      361 eeeddeqavh rarewddwkd trprgygnrq nmg
//
LOCUS       XP_061013140             380 aa            linear   MAM 02-DEC-2023
DEFINITION  immunoglobulin-binding protein 1-like isoform X2 [Dama dama].
ACCESSION   XP_061013140
VERSION     XP_061013140.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157157.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..380
                     /product="immunoglobulin-binding protein 1-like isoform
                     X2"
                     /calculated_mol_wt=43383
     Region          58..370
                     /region_name="TAP42"
                     /note="TAP42-like family; pfam04177"
                     /db_xref="CDD:461209"
     CDS             1..380
                     /gene="LOC133066267"
                     /coded_by="XM_061157157.1:105..1247"
                     /db_xref="GeneID:133066267"
ORIGIN      
        1 mnrqdrgatt agnlcshhil lgpeqkcrpl iivtccngge emaaaeeell lprlpelfet
       61 skqlldevei aaeptgsrii qdkvfkgldl lkkaaemllq ldlfsqnedl eeiastdlky
      121 lmvpafqgaf amkqvspnkr ldhlqwareh flnyltqcqy yhvaefelpk tktnsaennt
      181 anssmaypsi vamasqrqak ierykqkkev ehrlsalksa vesgqaddeh vreyyllhlr
      241 rwigisleei ksidqeikil rekdstkeas tsqssrhdrp amkpfvltrn maqakvfgag
      301 ypslasmtvn dwyeqhrkfg alpdqgiakt tsefkraaqq qddqeheeee ddeqavhrar
      361 ewddwkdtrp rgygnrqnmg
//
LOCUS       XP_061013141             339 aa            linear   MAM 02-DEC-2023
DEFINITION  immunoglobulin-binding protein 1-like isoform X3 [Dama dama].
ACCESSION   XP_061013141
VERSION     XP_061013141.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157158.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..339
                     /product="immunoglobulin-binding protein 1-like isoform
                     X3"
                     /calculated_mol_wt=38964
     Region          17..329
                     /region_name="TAP42"
                     /note="TAP42-like family; pfam04177"
                     /db_xref="CDD:461209"
     CDS             1..339
                     /gene="LOC133066267"
                     /coded_by="XM_061157158.1:149..1168"
                     /db_xref="GeneID:133066267"
ORIGIN      
        1 maaaeeelll prlpelfets kqlldeveia aeptgsriiq dkvfkgldll kkaaemllql
       61 dlfsqnedle eiastdlkyl mvpafqgafa mkqvspnkrl dhlqwarehf lnyltqcqyy
      121 hvaefelpkt ktnsaennta nssmaypsiv amasqrqaki erykqkkeve hrlsalksav
      181 esgqaddehv reyyllhlrr wigisleeik sidqeikilr ekdstkeast sqssrhdrpa
      241 mkpfvltrnm aqakvfgagy pslasmtvnd wyeqhrkfga lpdqgiaktt sefkraaqqq
      301 ddqeheeeed deqavhrare wddwkdtrpr gygnrqnmg
//
LOCUS       XP_061013142             339 aa            linear   MAM 02-DEC-2023
DEFINITION  immunoglobulin-binding protein 1-like isoform X3 [Dama dama].
ACCESSION   XP_061013142
VERSION     XP_061013142.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157159.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..339
                     /product="immunoglobulin-binding protein 1-like isoform
                     X3"
                     /calculated_mol_wt=38964
     Region          17..329
                     /region_name="TAP42"
                     /note="TAP42-like family; pfam04177"
                     /db_xref="CDD:461209"
     CDS             1..339
                     /gene="LOC133066267"
                     /coded_by="XM_061157159.1:127..1146"
                     /db_xref="GeneID:133066267"
ORIGIN      
        1 maaaeeelll prlpelfets kqlldeveia aeptgsriiq dkvfkgldll kkaaemllql
       61 dlfsqnedle eiastdlkyl mvpafqgafa mkqvspnkrl dhlqwarehf lnyltqcqyy
      121 hvaefelpkt ktnsaennta nssmaypsiv amasqrqaki erykqkkeve hrlsalksav
      181 esgqaddehv reyyllhlrr wigisleeik sidqeikilr ekdstkeast sqssrhdrpa
      241 mkpfvltrnm aqakvfgagy pslasmtvnd wyeqhrkfga lpdqgiaktt sefkraaqqq
      301 ddqeheeeed deqavhrare wddwkdtrpr gygnrqnmg
//
LOCUS       XP_061013144             213 aa            linear   MAM 02-DEC-2023
DEFINITION  lysM and putative peptidoglycan-binding domain-containing protein 2
            isoform X1 [Dama dama].
ACCESSION   XP_061013144
VERSION     XP_061013144.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157161.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..213
                     /product="lysM and putative peptidoglycan-binding
                     domain-containing protein 2 isoform X1"
                     /calculated_mol_wt=23031
     Region          <2..116
                     /region_name="LysM"
                     /note="LysM repeat [Cell wall/membrane/envelope
                     biogenesis]; COG1388"
                     /db_xref="CDD:440998"
     CDS             1..213
                     /gene="LYSMD2"
                     /coded_by="XM_061157161.1:30..671"
                     /db_xref="GeneID:133066269"
ORIGIN      
        1 madsspapsl raggpraprs sapspphsrs gseaeeaels lslartktrs ygstasvrap
       61 lgagvierhv ehrvragdtl qgialkygvs meqikrankl ftndciflkk tlnipvisek
      121 pllfnglnsv dspenetvds fsheeelvaa gedvsppspq eldvqpiqpe evsardflqr
      181 ldlqiklstq aakklkeesr deeslytasl yhs
//
LOCUS       XP_061013145             123 aa            linear   MAM 02-DEC-2023
DEFINITION  lysM and putative peptidoglycan-binding domain-containing protein 2
            isoform X2 [Dama dama].
ACCESSION   XP_061013145
VERSION     XP_061013145.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157162.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..123
                     /product="lysM and putative peptidoglycan-binding
                     domain-containing protein 2 isoform X2"
                     /calculated_mol_wt=13771
     CDS             1..123
                     /gene="LYSMD2"
                     /coded_by="XM_061157162.1:273..644"
                     /db_xref="GeneID:133066269"
ORIGIN      
        1 meqikrankl ftndciflkk tlnipvisek pllfnglnsv dspenetvds fsheeelvaa
       61 gedvsppspq eldvqpiqpe evsardflqr ldlqiklstq aakklkeesr deeslytasl
      121 yhs
//
LOCUS       XP_061013146             123 aa            linear   MAM 02-DEC-2023
DEFINITION  lysM and putative peptidoglycan-binding domain-containing protein 2
            isoform X2 [Dama dama].
ACCESSION   XP_061013146
VERSION     XP_061013146.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157163.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..123
                     /product="lysM and putative peptidoglycan-binding
                     domain-containing protein 2 isoform X2"
                     /calculated_mol_wt=13771
     CDS             1..123
                     /gene="LYSMD2"
                     /coded_by="XM_061157163.1:139..510"
                     /db_xref="GeneID:133066269"
ORIGIN      
        1 meqikrankl ftndciflkk tlnipvisek pllfnglnsv dspenetvds fsheeelvaa
       61 gedvsppspq eldvqpiqpe evsardflqr ldlqiklstq aakklkeesr deeslytasl
      121 yhs
//
LOCUS       XP_061013147             351 aa            linear   MAM 02-DEC-2023
DEFINITION  tropomodulin-2 isoform X1 [Dama dama].
ACCESSION   XP_061013147
VERSION     XP_061013147.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157164.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..351
                     /product="tropomodulin-2 isoform X1"
                     /calculated_mol_wt=39402
     Region          5..146
                     /region_name="Tropomodulin"
                     /note="pfam03250"
                     /db_xref="CDD:460862"
     Region          <209..338
                     /region_name="RNA1"
                     /note="Ran GTPase-activating protein (RanGAP) involved in
                     mRNA processing and transport [Translation, ribosomal
                     structure and biogenesis]; COG5238"
                     /db_xref="CDD:444072"
     CDS             1..351
                     /gene="TMOD2"
                     /coded_by="XM_061157164.1:206..1261"
                     /db_xref="GeneID:133066270"
ORIGIN      
        1 malpfqkele kyknidedel lgklseeelk qlenvlddld pesallpagf rqkdqtqkaa
       61 tgpfdrehll mylekealeq kdredfvpft gekkgrvfip kekpietrke ekvtldpele
      121 ealasasdte lydlaavlgv hnllnnpkfd eettntkggk gpvrnvvkge kvkpvfeepp
      181 nptnvevslq qmkandpslq evnlnnikni piptlkefak aletnthvkk fslaatrsnd
      241 pvaiafadml kvnktlksln iesnfitgag ilalvealke ndtlveikid nqrqqlgtav
      301 emeiaqmlee nsrilkfgyq ftkqgprtrv aaaitknndl vrkkrvegdr r
//
LOCUS       XP_061013149             349 aa            linear   MAM 02-DEC-2023
DEFINITION  tropomodulin-2 isoform X2 [Dama dama].
ACCESSION   XP_061013149
VERSION     XP_061013149.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157166.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..349
                     /product="tropomodulin-2 isoform X2"
                     /calculated_mol_wt=39118
     Region          5..146
                     /region_name="Tropomodulin"
                     /note="pfam03250"
                     /db_xref="CDD:460862"
     Region          <209..336
                     /region_name="RNA1"
                     /note="Ran GTPase-activating protein (RanGAP) involved in
                     mRNA processing and transport [Translation, ribosomal
                     structure and biogenesis]; COG5238"
                     /db_xref="CDD:444072"
     CDS             1..349
                     /gene="TMOD2"
                     /coded_by="XM_061157166.1:206..1255"
                     /db_xref="GeneID:133066270"
ORIGIN      
        1 malpfqkele kyknidedel lgklseeelk qlenvlddld pesallpagf rqkdqtqkaa
       61 tgpfdrehll mylekealeq kdredfvpft gekkgrvfip kekpietrke ekvtldpele
      121 ealasasdte lydlaavlgv hnllnnpkfd eettntkggk gpvrnvvkge kvkpvfeepp
      181 nptnvevslq qmkandpslq evnlnnikni piptlkefak aletnthvkk fslaatrsnd
      241 pvaiafadml kvnktlksln iesnfitgag ilalvealke ndtlveikid nqqlgtavem
      301 eiaqmleens rilkfgyqft kqgprtrvaa aitknndlvr kkrvegdrr
//
LOCUS       XP_061013150             352 aa            linear   MAM 02-DEC-2023
DEFINITION  tropomodulin-3 [Dama dama].
ACCESSION   XP_061013150
VERSION     XP_061013150.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157167.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..352
                     /product="tropomodulin-3"
                     /calculated_mol_wt=39590
     Region          5..146
                     /region_name="Tropomodulin"
                     /note="pfam03250"
                     /db_xref="CDD:460862"
     Region          <210..317
                     /region_name="RNA1"
                     /note="Ran GTPase-activating protein (RanGAP) involved in
                     mRNA processing and transport [Translation, ribosomal
                     structure and biogenesis]; COG5238"
                     /db_xref="CDD:444072"
     CDS             1..352
                     /gene="TMOD3"
                     /coded_by="XM_061157167.1:220..1278"
                     /db_xref="GeneID:133066271"
ORIGIN      
        1 malsfrkdle kykdldedel lgnlseielk qletvlddld penallpagf rqknqtsksa
       61 tgpfdrehll sylekealeh kdredyvpyt gekkgkifip kqkpvqtfte ekvsldpele
      121 ealtsasdte lcdlaailgm hnlitntqfc nivgssngvd qehfsnvvkg ekilpvfdep
      181 pnptnveesl krikendacl vevnlnnikn ipiptlkdfa kaletnthvk yfslaatrsn
      241 dpvatafadm lrvnknlksl nmesnfitgi giralidalk enetlmelki dnqrqqlgta
      301 velemanmle entnilkfgy qftqqgprtr aanaitknnd lvrkrrvegd hq
//
LOCUS       XP_061013151             668 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA polymerase-associated protein LEO1 [Dama dama].
ACCESSION   XP_061013151
VERSION     XP_061013151.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157168.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..668
                     /product="RNA polymerase-associated protein LEO1"
                     /calculated_mol_wt=75552
     Region          <9..363
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     Region          376..538
                     /region_name="Leo1"
                     /note="Leo1-like protein; pfam04004"
                     /db_xref="CDD:461126"
     CDS             1..668
                     /gene="LEO1"
                     /coded_by="XM_061157168.1:94..2100"
                     /db_xref="GeneID:133066272"
ORIGIN      
        1 madmedlfgs dadsdperkd sdsgsgsdsd qenvasgsna sgsesdqder ddagkpsnke
       61 lfgddsedeg ashhsgsdnh segsdnrsea sehsdhednd psdvdqhsgs etrndndded
      121 eghrsdggsh hseaegseka hsddekwgre dksdqsddek iqnsddeera qgsdedklqn
      181 sdddekmqnt ddeerpqlse derqqlseee kansdderpa asdnddekqn sddeerpqis
      241 deekmqnsdd erpqpsdeeh rhsddeeeqd hksesargsd sedevlrmkr knaiasdsea
      301 esdtevpkdn sgtmdlfgga ddissgsdge dkpptpgqpv denglpqdqq eeepipetri
      361 eveipkvntd lgndlyfvkl pnflsveprp fdpqyyedef edeemldeeg rtrlklkven
      421 tirwrirrde egneikesna rivkwsdgsm slhlgnevfd vykaplqgdh nhlfirqgtg
      481 lqgqavfktk ltfrphstds athrkmtlsl adrcsktqki rilpmagrdp ecqrtemikk
      541 eeerlrasir resqqrrmre kqhqrglsas ylepdrydee eegeesisla aiknrykggi
      601 reerariyss dsdegseedk aqrllkakkl tsdeegepsg krkaedddka nkkhkkyvis
      661 deeeeddd
//
LOCUS       XP_061013152             722 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase 6 [Dama dama].
ACCESSION   XP_061013152
VERSION     XP_061013152.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157169.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..722
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..722
                     /product="mitogen-activated protein kinase 6"
                     /calculated_mol_wt=82587
     Region          14..355
                     /region_name="STKc_MAPK4_6"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     Mitogen-Activated Protein Kinases 4 (also called ERK4) and
                     6 (also called ERK3); cd07854"
                     /db_xref="CDD:143359"
     Site            order(26..29,31..32,34,47,49,64,78,108..111,114,116..117,
                     152,154,156..157,159,170..171,174,189,191..194,196,234)
                     /site_type="active"
                     /db_xref="CDD:143359"
     Site            order(26..29,31..32,34,47,49,78,108..111,114,117,154,
                     156..157,159,170..171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:143359"
     Site            order(64,116,152,154,174,189,191..194,196,234)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:143359"
     Site            order(75,112..113,118,128,131,138,160..163,165,319,321,
                     324)
                     /site_type="other"
                     /note="KIM docking site [polypeptide binding]"
                     /db_xref="CDD:143359"
     Site            170..196
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:143359"
     CDS             1..722
                     /gene="MAPK6"
                     /coded_by="XM_061157169.1:792..2960"
                     /db_xref="GeneID:133066273"
ORIGIN      
        1 maekfeslmn ihgfdlgsry mdlkplgcgg nglvfsavdn dcdkrvaikk ivltdpqsvk
       61 halreikiir rldhdnivkv feilgpsgsq ltddvgslte lnsvyivqey metdlanvle
      121 qgplleehar lfmyqllrgl kyihsanvlh rdlkpanlfi ntedlvlkig dfglarimdp
      181 hyshkghlse glvtkwyrsp rlllspnnyt kaidmwaagc ifaemltgkt lfagaheleq
      241 mqlilesipv vheedrqell svipvyirnd mtephkpltq llpgisreal dfleqiltfs
      301 pmdrltaeea lshpymsiys fpmdepissh pfhiedevdd illmdethsh iynweryhdc
      361 qfsehdwpih nnfdieevql dpralsdvtd eeevqvdprk yldgdrekyl edpafdtsys
      421 tepcwqypdh henkycdlec shtcnyktrs ssyldnlvwr esevnhyyep kliidlsnwk
      481 eqskeksdkk gkskcerngl vkaqialeea sqqlaekere knqgfdfdsf iagtiqlssq
      541 heatdvvdkl ndlnssvsql elkslisksv sqekqekgma nlaqlealyq sswdsqfvgg
      601 gedcflinqf ccevrkdeqi ekentytsyl dkffsrkedt emletepved gklgergnee
      661 gflnssgefl fnkqlesigi pqfnspvgsp lksiqatltp samksspqip hktyssilkh
      721 ln
//
LOCUS       XP_061013153             722 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase 6 [Dama dama].
ACCESSION   XP_061013153
VERSION     XP_061013153.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157170.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..722
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..722
                     /product="mitogen-activated protein kinase 6"
                     /calculated_mol_wt=82587
     Region          14..355
                     /region_name="STKc_MAPK4_6"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     Mitogen-Activated Protein Kinases 4 (also called ERK4) and
                     6 (also called ERK3); cd07854"
                     /db_xref="CDD:143359"
     Site            order(26..29,31..32,34,47,49,64,78,108..111,114,116..117,
                     152,154,156..157,159,170..171,174,189,191..194,196,234)
                     /site_type="active"
                     /db_xref="CDD:143359"
     Site            order(26..29,31..32,34,47,49,78,108..111,114,117,154,
                     156..157,159,170..171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:143359"
     Site            order(64,116,152,154,174,189,191..194,196,234)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:143359"
     Site            order(75,112..113,118,128,131,138,160..163,165,319,321,
                     324)
                     /site_type="other"
                     /note="KIM docking site [polypeptide binding]"
                     /db_xref="CDD:143359"
     Site            170..196
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:143359"
     CDS             1..722
                     /gene="MAPK6"
                     /coded_by="XM_061157170.1:784..2952"
                     /db_xref="GeneID:133066273"
ORIGIN      
        1 maekfeslmn ihgfdlgsry mdlkplgcgg nglvfsavdn dcdkrvaikk ivltdpqsvk
       61 halreikiir rldhdnivkv feilgpsgsq ltddvgslte lnsvyivqey metdlanvle
      121 qgplleehar lfmyqllrgl kyihsanvlh rdlkpanlfi ntedlvlkig dfglarimdp
      181 hyshkghlse glvtkwyrsp rlllspnnyt kaidmwaagc ifaemltgkt lfagaheleq
      241 mqlilesipv vheedrqell svipvyirnd mtephkpltq llpgisreal dfleqiltfs
      301 pmdrltaeea lshpymsiys fpmdepissh pfhiedevdd illmdethsh iynweryhdc
      361 qfsehdwpih nnfdieevql dpralsdvtd eeevqvdprk yldgdrekyl edpafdtsys
      421 tepcwqypdh henkycdlec shtcnyktrs ssyldnlvwr esevnhyyep kliidlsnwk
      481 eqskeksdkk gkskcerngl vkaqialeea sqqlaekere knqgfdfdsf iagtiqlssq
      541 heatdvvdkl ndlnssvsql elkslisksv sqekqekgma nlaqlealyq sswdsqfvgg
      601 gedcflinqf ccevrkdeqi ekentytsyl dkffsrkedt emletepved gklgergnee
      661 gflnssgefl fnkqlesigi pqfnspvgsp lksiqatltp samksspqip hktyssilkh
      721 ln
//
LOCUS       XP_061013154             722 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase 6 [Dama dama].
ACCESSION   XP_061013154
VERSION     XP_061013154.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157171.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..722
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..722
                     /product="mitogen-activated protein kinase 6"
                     /calculated_mol_wt=82587
     Region          14..355
                     /region_name="STKc_MAPK4_6"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     Mitogen-Activated Protein Kinases 4 (also called ERK4) and
                     6 (also called ERK3); cd07854"
                     /db_xref="CDD:143359"
     Site            order(26..29,31..32,34,47,49,64,78,108..111,114,116..117,
                     152,154,156..157,159,170..171,174,189,191..194,196,234)
                     /site_type="active"
                     /db_xref="CDD:143359"
     Site            order(26..29,31..32,34,47,49,78,108..111,114,117,154,
                     156..157,159,170..171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:143359"
     Site            order(64,116,152,154,174,189,191..194,196,234)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:143359"
     Site            order(75,112..113,118,128,131,138,160..163,165,319,321,
                     324)
                     /site_type="other"
                     /note="KIM docking site [polypeptide binding]"
                     /db_xref="CDD:143359"
     Site            170..196
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:143359"
     CDS             1..722
                     /gene="MAPK6"
                     /coded_by="XM_061157171.1:861..3029"
                     /db_xref="GeneID:133066273"
ORIGIN      
        1 maekfeslmn ihgfdlgsry mdlkplgcgg nglvfsavdn dcdkrvaikk ivltdpqsvk
       61 halreikiir rldhdnivkv feilgpsgsq ltddvgslte lnsvyivqey metdlanvle
      121 qgplleehar lfmyqllrgl kyihsanvlh rdlkpanlfi ntedlvlkig dfglarimdp
      181 hyshkghlse glvtkwyrsp rlllspnnyt kaidmwaagc ifaemltgkt lfagaheleq
      241 mqlilesipv vheedrqell svipvyirnd mtephkpltq llpgisreal dfleqiltfs
      301 pmdrltaeea lshpymsiys fpmdepissh pfhiedevdd illmdethsh iynweryhdc
      361 qfsehdwpih nnfdieevql dpralsdvtd eeevqvdprk yldgdrekyl edpafdtsys
      421 tepcwqypdh henkycdlec shtcnyktrs ssyldnlvwr esevnhyyep kliidlsnwk
      481 eqskeksdkk gkskcerngl vkaqialeea sqqlaekere knqgfdfdsf iagtiqlssq
      541 heatdvvdkl ndlnssvsql elkslisksv sqekqekgma nlaqlealyq sswdsqfvgg
      601 gedcflinqf ccevrkdeqi ekentytsyl dkffsrkedt emletepved gklgergnee
      661 gflnssgefl fnkqlesigi pqfnspvgsp lksiqatltp samksspqip hktyssilkh
      721 ln
//
LOCUS       XP_061013155             369 aa            linear   MAM 02-DEC-2023
DEFINITION  guanine nucleotide-binding protein subunit beta-5 isoform X1 [Dama
            dama].
ACCESSION   XP_061013155
VERSION     XP_061013155.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157172.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..369
                     /product="guanine nucleotide-binding protein subunit
                     beta-5 isoform X1"
                     /calculated_mol_wt=40334
     Region          56..369
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(62,80,84,90..91,98..99,122,142,148..149,167..168,
                     186,190,196..197,210,230,234,240..241,253..254,272,276,
                     282..283,294..295,315,320,326..327,339..340,358,362,
                     368..369)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          66..103
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          109..167
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          172..208
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          215..252
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          258..294
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          302..338
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          344..368
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..369
                     /gene="GNB5"
                     /coded_by="XM_061157172.1:132..1241"
                     /db_xref="GeneID:133066274"
ORIGIN      
        1 maadglhene tlaslkseae slkgkleeer aklhdvelhq vaervealgq fvmktrrtlk
       61 ghgnkvlcmd wckdkrrlvs ssqdgkvivw dsfttnkeha vtmpctwvma cayapsgcai
      121 acgccwqgpq icadtlesig ldnkcsvypl tfdknenmaa kkksvamhtn ylsacsftns
      181 dmqiltasgd gtcalwdves gqllqsfhgh gadvlcldla psetgntfvs ggcdkkamvw
      241 dmrsgqcvqa fethesdins vryypsgdaf asgsddatcr lydlradrev aiyskesiif
      301 gassvdfsls grllfagynd ytinvwdvlk gsrvsilfgh enrvstlrvs pdgtafcsgs
      361 wdhtlrvwa
//
LOCUS       XP_061013156             353 aa            linear   MAM 02-DEC-2023
DEFINITION  guanine nucleotide-binding protein subunit beta-5 isoform X2 [Dama
            dama].
ACCESSION   XP_061013156
VERSION     XP_061013156.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157173.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..353
                     /product="guanine nucleotide-binding protein subunit
                     beta-5 isoform X2"
                     /calculated_mol_wt=38585
     Region          56..353
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(62,80,84,90..91,98..99,122,126,132..133,151..152,
                     170,174,180..181,194,214,218,224..225,237..238,256,260,
                     266..267,278..279,299,304,310..311,323..324,342,346,
                     352..353)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          66..103
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          109..151
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          156..192
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          199..236
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          242..278
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          286..322
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          328..352
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..353
                     /gene="GNB5"
                     /coded_by="XM_061157173.1:131..1192"
                     /db_xref="GeneID:133066274"
ORIGIN      
        1 maadglhene tlaslkseae slkgkleeer aklhdvelhq vaervealgq fvmktrrtlk
       61 ghgnkvlcmd wckdkrrlvs ssqdgkvivw dsfttnkeha vtmpctwvma cayapsgcai
      121 acggldnkcs vypltfdkne nmaakkksva mhtnylsacs ftnsdmqilt asgdgtcalw
      181 dvesgqllqs fhghgadvlc ldlapsetgn tfvsggcdkk amvwdmrsgq cvqafethes
      241 dinsvryyps gdafasgsdd atcrlydlra drevaiyske siifgassvd fslsgrllfa
      301 gyndytinvw dvlkgsrvsi lfghenrvst lrvspdgtaf csgswdhtlr vwa
//
LOCUS       XP_061013157             321 aa            linear   MAM 02-DEC-2023
DEFINITION  guanine nucleotide-binding protein subunit beta-5 isoform X3 [Dama
            dama].
ACCESSION   XP_061013157
VERSION     XP_061013157.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157174.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..321
                     /product="guanine nucleotide-binding protein subunit
                     beta-5 isoform X3"
                     /calculated_mol_wt=35460
     Region          56..321
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(62,80,84,90..91,98..99,122,138,143,160,168,186,
                     192..193,205..206,224,228,234..235,246..247,267,272,
                     278..279,291..292,310,314,320..321)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          66..103
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          109..167
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          172..204
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          211..246
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          253..290
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..321
                     /gene="GNB5"
                     /coded_by="XM_061157174.1:131..1096"
                     /db_xref="GeneID:133066274"
ORIGIN      
        1 maadglhene tlaslkseae slkgkleeer aklhdvelhq vaervealgq fvmktrrtlk
       61 ghgnkvlcmd wckdkrrlvs ssqdgkvivw dsfttnkeha vtmpctwvma cayapsgcai
      121 acgccwqgpq icadtlesig ldnkcsvypl tfdknenmaa kkksvamhtn ylsacsftns
      181 dmqgcdkkam vwdmrsgqcv qafethesdi nsvryypsgd afasgsddat crlydlradr
      241 evaiyskesi ifgassvdfs lsgrllfagy ndytinvwdv lkgsrvsilf ghenrvstlr
      301 vspdgtafcs gswdhtlrvw a
//
LOCUS       XP_061013158             317 aa            linear   MAM 02-DEC-2023
DEFINITION  guanine nucleotide-binding protein subunit beta-5 isoform X4 [Dama
            dama].
ACCESSION   XP_061013158
VERSION     XP_061013158.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157175.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..317
                     /product="guanine nucleotide-binding protein subunit
                     beta-5 isoform X4"
                     /calculated_mol_wt=34777
     Region          31..317
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(32,38..39,46..47,70,90,96..97,115..116,133,138,
                     144..145,158,178,182,188..189,201..202,220,224,230..231,
                     242..243,263,268,274..275,287..288,306,310,316..317)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          57..115
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          120..156
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          165..200
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          206..242
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          250..286
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          292..316
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..317
                     /gene="GNB5"
                     /coded_by="XM_061157175.1:151..1104"
                     /db_xref="GeneID:133066274"
ORIGIN      
        1 mrtrrwrrsr arprasranw rrsgpscttw sdgkvivwds fttnkehavt mpctwvmaca
       61 yapsgcaiac gccwqgpqic adtlesigld nkcsvypltf dknenmaakk ksvamhtnyl
      121 sacsftnsdm qiltasgdgt calwdvesgq llqsfhghga dvlcldlaps etgntfvsgg
      181 cdkkamvwdm rsgqcvqafe thesdinsvr yypsgdafas gsddatcrly dlradrevai
      241 yskesiifga ssvdfslsgr llfagyndyt invwdvlkgs rvsilfghen rvstlrvspd
      301 gtafcsgswd htlrvwa
//
LOCUS       XP_061013159            1742 aa            linear   MAM 02-DEC-2023
DEFINITION  unconventional myosin-Vc [Dama dama].
ACCESSION   XP_061013159
VERSION     XP_061013159.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157176.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1742
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1742
                     /product="unconventional myosin-Vc"
                     /calculated_mol_wt=203010
     Region          81..741
                     /region_name="MYSc_Myo5"
                     /note="class V myosin, motor domain; cd01380"
                     /db_xref="CDD:276831"
     Site            order(109..117,161..168,207..217,435..440)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276831"
     Site            109..117
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276831"
     Site            161..168
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276831"
     Site            207..217
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276831"
     Site            435..443
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276831"
     Site            order(464..475,478..487)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276831"
     Site            674..684
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276831"
     Site            order(695..705,726..741)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276831"
     Region          755..776
                     /region_name="IQ"
                     /note="Calmodulin-binding motif; smart00015"
                     /db_xref="CDD:197470"
     Region          830..851
                     /region_name="IQ"
                     /note="Calmodulin-binding motif; smart00015"
                     /db_xref="CDD:197470"
     Region          <894..1347
                     /region_name="Mplasa_alph_rch"
                     /note="helix-rich Mycoplasma protein; TIGR04523"
                     /db_xref="CDD:275316"
     Region          1369..1736
                     /region_name="Myo5c_CBD"
                     /note="Cargo binding domain of myosin 5C; cd15476"
                     /db_xref="CDD:271260"
     CDS             1..1742
                     /gene="MYO5C"
                     /coded_by="XM_061157176.1:163..5391"
                     /db_xref="GeneID:133066276"
ORIGIN      
        1 mavaelytky nrvwipdsee vwksaeiakd yrvgdkvlql lledgteldy svdpeclppl
       61 rnpdilvgen dltalsylhe pavlhnlrir faeskliyty sgiilvamnp ykqlpiygda
      121 iihaysgqnm gdmdphifav aeeaykqmar nnknqsiivs gesgagktvs aryamryfat
      181 vsksssnahv edkvlasnpi teavgnaktt rndnssrfgk yteisfdern qiiganmrty
      241 lleksrvvfq senernyhif yqlcasaqqs efkhlklgsa eefnytrmgg stvlegvndr
      301 admietqktf tllgfkedfq mdvfkvlaai lhlgnvqiaa vgndrsvine ddghlevfce
      361 llglesgrva qwlcnrkivt tsetvvkpmt rpqavnarda lakkiyahlf dfiverinqa
      421 lhfsgkqhtf igvldiygfe tfevnsfeqf cinyaneklq qqfnlhvfkl eqeeymkedi
      481 pwtlidfydn qpvidlieak mgilelldee cllphgtden wlqklynnfv nknslfekpr
      541 msntsfiiqh fadkveykce gfleknrdtv ydmlveilra skfhlcanff qenpvpsspf
      601 gsaitvksak pvikpnnkhf rstvgskfrs slyllmetln attphyvrci kpndeklpfe
      661 fdskrivqql racgvletir isaqsypsrw tyiefysryg vlmtkqelsf sdkkevckvv
      721 lhrliqdsnq yqfgktkiff ragqvaylek lrldklrqgc iviqkhvrgw lqrkkflrer
      781 raaviiqqyf rgqktvrkav tatalkeawa aiviqkycra ylvrnlyqli rvatitiqay
      841 trgflarrry qkmlkehkav ilqkyarawl arrrfqnirr fvlniqltyr vqrlqkkled
      901 qnkenhglme kltclaalra sdvdkiqkle seldraathr qnyeekgmry rasveeklak
      961 lqkhnselei qkeqiqqklq ekteelkekm dnltkqlfdd vqkeeqqrvl leksfelktq
     1021 dyekqirslr eeikalkdek mqlqrqleee rvtsdglkge varlskqakt isefekeiel
     1081 lqtqkidvek hvqsqkremr ekmseitrql lesydiedvr nrlsledleh lnedgelwfa
     1141 yeglkkatrv lenhfqsqkd cyekeiealn fkvvhlsqei nhlqklfree ndinesirhe
     1201 vtrltsenmm ipdfkqqise lekqkqdlei rlneqtetmk gkleelsnql nhnqeeegtq
     1261 rktieaqnei htkekeklmd kiqemqease hlrkqfeten evkssfrqea srltmekrdl
     1321 eeeldmkerv ikklqdqvkt ltktiekand vhlssgpkey lgmleykred eakliqnlil
     1381 dlkprgvvvn mipglpahil fmcvryadsl ndadmlkslm nstisgikqv vkehledfem
     1441 lsfwlsntch flnclkqysg eeefmkhnsp hqnknclnnf dlseyrqils dvairiyhqf
     1501 iivmenniqp iivpgmleye slqgisglkp tgfrkrsssi ddtdaytmts vlqqlsyfys
     1561 tmcqngldpe ivrqavkqlf fligavtlns lflrkdmcsc rkgmqircni syleewlkdk
     1621 nlqnnlaket leplsqaawl lqvkkttdsd akeiyercts lsavqiikil nsytpiddfe
     1681 krvtpsfvrk vqallnsred sshlmldtky lfqvtfpftp sphalemiqi pssfklgfln
     1741 rl
//
LOCUS       XP_061013161            1877 aa            linear   MAM 02-DEC-2023
DEFINITION  unconventional myosin-Va isoform X1 [Dama dama].
ACCESSION   XP_061013161
VERSION     XP_061013161.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157178.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1877
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1877
                     /product="unconventional myosin-Va isoform X1"
                     /calculated_mol_wt=217928
     Region          7..1291
                     /region_name="COG5022"
                     /note="Myosin heavy chain [General function prediction
                     only]"
                     /db_xref="CDD:227355"
     Region          83..751
                     /region_name="MYSc_Myo5"
                     /note="class V myosin, motor domain; cd01380"
                     /db_xref="CDD:276831"
     Site            order(111..119,163..170,209..219,437..442)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276831"
     Site            111..119
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276831"
     Site            163..170
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276831"
     Site            209..219
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276831"
     Site            437..445
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276831"
     Site            order(466..477,480..489)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276831"
     Site            685..695
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276831"
     Site            order(706..716,736..751)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276831"
     Region          1156..>1465
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          1503..1877
                     /region_name="Myo5a_CBD"
                     /note="Cargo binding domain of myosin 5a; cd15478"
                     /db_xref="CDD:271262"
     Site            order(1520..1522,1525..1528,1698..1699,1857,1862,1864,
                     1866..1868)
                     /site_type="other"
                     /note="RILPL2 interface [polypeptide binding]"
                     /db_xref="CDD:271262"
     Site            order(1548,1551..1552,1555..1556,1559..1560,1563,1594,
                     1612..1617,1619..1620,1623)
                     /site_type="other"
                     /note="melanophilin interface [polypeptide binding]"
                     /db_xref="CDD:271262"
     CDS             1..1877
                     /gene="MYO5A"
                     /coded_by="XM_061157178.1:58..5691"
                     /db_xref="GeneID:133066277"
ORIGIN      
        1 maaselytkf arvwipdpee vwksaellkd ykpgdkvlll hledgkdley rldpktkelp
       61 hlrnpdilvg endltalsyl hepavlhnlr vrfidskliy tycgivlvai npyeqlpiyg
      121 ediinaysgq nmgdmdphif avaeeaykqm ardernqsii vsgesgagkt vsakyamryf
      181 atvsgsasea nveekvlasn pimesignak ttrndnssrf gkyieigfdk ryriiganmr
      241 tylleksrvv fqaeeernyh ifyqlcasan lpefkvlrlg dannfhytnq ggspmiegvd
      301 dakemahtrq actllgises yqmgifrila gilhlgnvvf msrdsdscti ppkheplsif
      361 cdlmgvdfee mchwlchrkl atatetyikp isklqatnar dalakhiyak lfnwivdhvn
      421 qalhsavkqh sfigvldiyg fetfeinsfe qfcinyanek lqqqfnmhvf kleqeeymke
      481 qipwtlidfy dnqpcinlie sklgildlld eeckmpkgtd dtwaqklynt hlnkcalfek
      541 prlsnkafii qhfadkveyq cegfleknkd tvfeeqikvl ksskfkmlpe lfqddekais
      601 ptsatssgrv pltripskpt kgrpgqtake hkktvghqfr nslhllmetl nattphyvrc
      661 ikpndfkfpf tfdekravqq lracgvleti risaagfpsr wtyqeffsry rvlmkqkdvl
      721 sdrkqtcknv leklivdkdk yqfgktkiff ragqvaylek lradklraac iriqktirgw
      781 llrkkylrmr kaaiivqryv rghqarcyak flrrtkaati iqkywrmcva rrrykitrta
      841 tivlqsylrg ylarnryhki lrehkaviiq kwvrgwlart yyrrsihaii ylqccfrrmm
      901 akrelkklki earsverykk lhigmenkim qlqrkvdeqn kdykclmekl tnlegiynse
      961 teklrsdler lqlseeeaki atgrvlslqe eiaklrkdle qtqsekksie eradrykqet
     1021 eqlvsnlkee ntllkqeket lnhriveqak emtetmekkl veetkqleld lnderlryqn
     1081 llnefsrlee ryddlkeemt lmvnvpkpgh krtdsthssn eseytfssei aetedipsrt
     1141 eepsekkvpl dmslflklqk rvteleqekq vmqdeldrke eqvlrskake eerpqirgae
     1201 leyeslkrqe lesenkklkn elnelrkals eksapevtap gapayrvlme qltsvseeld
     1261 vrkeevlilr sqlvsqkeai qpkntmtdst illedvqkmk dkgeiaqayi glketnrssa
     1321 mdchelnedg elllvyeglk qanrllesql qsqkrshene aealrgeiqs lkeennrqqq
     1381 llaqnlqlpp earieaslqh eitrltnenl yfeelyaddp kkyqsyrisl ykrmidlmeq
     1441 lekqdktvrk lkkqlkvfak kigelevgqm enispgqtid epirpvnipr kekdfqgmle
     1501 ykkedeqklv knlilelkpr gvavnlipgl payilfmcvr hadylnddqk vrslltstin
     1561 sikkvlkkrg ddfetvsfwl sntcrflhcl kqysgeegfm khntsrqneh cltnfdlaey
     1621 rqvlsdlaiq iyqqlvrvle nilqpmivsg mlehetiqgv sgvkptglrk rtssiadegt
     1681 ytldsilrql nsfhsvmcqh gmdpelikqv vkqmfyivga vtlnnlllrk dmcswskgmq
     1741 irynvsqlee wlrdknlmns gaketlepli qaaqllqvkk ktdddaeaic smcnalttaq
     1801 ivkvlnlytp vnefeervsv sfirtiqmrl rdrkdspqll mdakhifpvt fpfnpsslal
     1861 etiqipaslg lgfisrv
//
LOCUS       XP_061013162            1852 aa            linear   MAM 02-DEC-2023
DEFINITION  unconventional myosin-Va isoform X2 [Dama dama].
ACCESSION   XP_061013162
VERSION     XP_061013162.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157179.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1852
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1852
                     /product="unconventional myosin-Va isoform X2"
                     /calculated_mol_wt=214725
     Region          7..1291
                     /region_name="COG5022"
                     /note="Myosin heavy chain [General function prediction
                     only]"
                     /db_xref="CDD:227355"
     Region          83..751
                     /region_name="MYSc_Myo5"
                     /note="class V myosin, motor domain; cd01380"
                     /db_xref="CDD:276831"
     Site            order(111..119,163..170,209..219,437..442)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276831"
     Site            111..119
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276831"
     Site            163..170
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276831"
     Site            209..219
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276831"
     Site            437..445
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276831"
     Site            order(466..477,480..489)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276831"
     Site            685..695
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276831"
     Site            order(706..716,736..751)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276831"
     Region          1162..>1441
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     Region          1478..1852
                     /region_name="Myo5a_CBD"
                     /note="Cargo binding domain of myosin 5a; cd15478"
                     /db_xref="CDD:271262"
     Site            order(1495..1497,1500..1503,1673..1674,1832,1837,1839,
                     1841..1843)
                     /site_type="other"
                     /note="RILPL2 interface [polypeptide binding]"
                     /db_xref="CDD:271262"
     Site            order(1523,1526..1527,1530..1531,1534..1535,1538,1569,
                     1587..1592,1594..1595,1598)
                     /site_type="other"
                     /note="melanophilin interface [polypeptide binding]"
                     /db_xref="CDD:271262"
     CDS             1..1852
                     /gene="MYO5A"
                     /coded_by="XM_061157179.1:58..5616"
                     /db_xref="GeneID:133066277"
ORIGIN      
        1 maaselytkf arvwipdpee vwksaellkd ykpgdkvlll hledgkdley rldpktkelp
       61 hlrnpdilvg endltalsyl hepavlhnlr vrfidskliy tycgivlvai npyeqlpiyg
      121 ediinaysgq nmgdmdphif avaeeaykqm ardernqsii vsgesgagkt vsakyamryf
      181 atvsgsasea nveekvlasn pimesignak ttrndnssrf gkyieigfdk ryriiganmr
      241 tylleksrvv fqaeeernyh ifyqlcasan lpefkvlrlg dannfhytnq ggspmiegvd
      301 dakemahtrq actllgises yqmgifrila gilhlgnvvf msrdsdscti ppkheplsif
      361 cdlmgvdfee mchwlchrkl atatetyikp isklqatnar dalakhiyak lfnwivdhvn
      421 qalhsavkqh sfigvldiyg fetfeinsfe qfcinyanek lqqqfnmhvf kleqeeymke
      481 qipwtlidfy dnqpcinlie sklgildlld eeckmpkgtd dtwaqklynt hlnkcalfek
      541 prlsnkafii qhfadkveyq cegfleknkd tvfeeqikvl ksskfkmlpe lfqddekais
      601 ptsatssgrv pltripskpt kgrpgqtake hkktvghqfr nslhllmetl nattphyvrc
      661 ikpndfkfpf tfdekravqq lracgvleti risaagfpsr wtyqeffsry rvlmkqkdvl
      721 sdrkqtcknv leklivdkdk yqfgktkiff ragqvaylek lradklraac iriqktirgw
      781 llrkkylrmr kaaiivqryv rghqarcyak flrrtkaati iqkywrmcva rrrykitrta
      841 tivlqsylrg ylarnryhki lrehkaviiq kwvrgwlart yyrrsihaii ylqccfrrmm
      901 akrelkklki earsverykk lhigmenkim qlqrkvdeqn kdykclmekl tnlegiynse
      961 teklrsdler lqlseeeaki atgrvlslqe eiaklrkdle qtqsekksie eradrykqet
     1021 eqlvsnlkee ntllkqeket lnhriveqak emtetmekkl veetkqleld lnderlryqn
     1081 llnefsrlee ryddlkeemt lmvnvpkpgh krtdsthssn eseytfssei aetedipsrt
     1141 eepsekkvpl dmslflklqk rvteleqekq vmqdeldrke eqvlrskake eerpqirgae
     1201 leyeslkrqe lesenkklkn elnelrkals eksapevtap gapayrvlme qltsvseeld
     1261 vrkeevlilr sqlvsqkeai qpkntmtdst illedvqkmk dkgeiaqayi glketnrssa
     1321 mdchelnedg elllvyeglk qanrllesql qsqkrshene aealrgeiqs lkeennrqqq
     1381 llaqnlqlpp earieaslqh eitrltnenl dlmeqlekqd ktvrklkkql kvfakkigel
     1441 evgqmenisp gqtidepirp vniprkekdf qgmleykked eqklvknlil elkprgvavn
     1501 lipglpayil fmcvrhadyl nddqkvrsll tstinsikkv lkkrgddfet vsfwlsntcr
     1561 flhclkqysg eegfmkhnts rqnehcltnf dlaeyrqvls dlaiqiyqql vrvlenilqp
     1621 mivsgmlehe tiqgvsgvkp tglrkrtssi adegtytlds ilrqlnsfhs vmcqhgmdpe
     1681 likqvvkqmf yivgavtlnn lllrkdmcsw skgmqirynv sqleewlrdk nlmnsgaket
     1741 lepliqaaql lqvkkktddd aeaicsmcna lttaqivkvl nlytpvnefe ervsvsfirt
     1801 iqmrlrdrkd spqllmdakh ifpvtfpfnp sslaletiqi paslglgfis rv
//
LOCUS       XP_061013163            1850 aa            linear   MAM 02-DEC-2023
DEFINITION  unconventional myosin-Va isoform X3 [Dama dama].
ACCESSION   XP_061013163
VERSION     XP_061013163.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157180.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1850
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1850
                     /product="unconventional myosin-Va isoform X3"
                     /calculated_mol_wt=214910
     Region          7..1291
                     /region_name="COG5022"
                     /note="Myosin heavy chain [General function prediction
                     only]"
                     /db_xref="CDD:227355"
     Region          83..751
                     /region_name="MYSc_Myo5"
                     /note="class V myosin, motor domain; cd01380"
                     /db_xref="CDD:276831"
     Site            order(111..119,163..170,209..219,437..442)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276831"
     Site            111..119
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276831"
     Site            163..170
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276831"
     Site            209..219
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276831"
     Site            437..445
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276831"
     Site            order(466..477,480..489)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276831"
     Site            685..695
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276831"
     Site            order(706..716,736..751)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276831"
     Region          1156..>1438
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          1476..1850
                     /region_name="Myo5a_CBD"
                     /note="Cargo binding domain of myosin 5a; cd15478"
                     /db_xref="CDD:271262"
     Site            order(1493..1495,1498..1501,1671..1672,1830,1835,1837,
                     1839..1841)
                     /site_type="other"
                     /note="RILPL2 interface [polypeptide binding]"
                     /db_xref="CDD:271262"
     Site            order(1521,1524..1525,1528..1529,1532..1533,1536,1567,
                     1585..1590,1592..1593,1596)
                     /site_type="other"
                     /note="melanophilin interface [polypeptide binding]"
                     /db_xref="CDD:271262"
     CDS             1..1850
                     /gene="MYO5A"
                     /coded_by="XM_061157180.1:58..5610"
                     /db_xref="GeneID:133066277"
ORIGIN      
        1 maaselytkf arvwipdpee vwksaellkd ykpgdkvlll hledgkdley rldpktkelp
       61 hlrnpdilvg endltalsyl hepavlhnlr vrfidskliy tycgivlvai npyeqlpiyg
      121 ediinaysgq nmgdmdphif avaeeaykqm ardernqsii vsgesgagkt vsakyamryf
      181 atvsgsasea nveekvlasn pimesignak ttrndnssrf gkyieigfdk ryriiganmr
      241 tylleksrvv fqaeeernyh ifyqlcasan lpefkvlrlg dannfhytnq ggspmiegvd
      301 dakemahtrq actllgises yqmgifrila gilhlgnvvf msrdsdscti ppkheplsif
      361 cdlmgvdfee mchwlchrkl atatetyikp isklqatnar dalakhiyak lfnwivdhvn
      421 qalhsavkqh sfigvldiyg fetfeinsfe qfcinyanek lqqqfnmhvf kleqeeymke
      481 qipwtlidfy dnqpcinlie sklgildlld eeckmpkgtd dtwaqklynt hlnkcalfek
      541 prlsnkafii qhfadkveyq cegfleknkd tvfeeqikvl ksskfkmlpe lfqddekais
      601 ptsatssgrv pltripskpt kgrpgqtake hkktvghqfr nslhllmetl nattphyvrc
      661 ikpndfkfpf tfdekravqq lracgvleti risaagfpsr wtyqeffsry rvlmkqkdvl
      721 sdrkqtcknv leklivdkdk yqfgktkiff ragqvaylek lradklraac iriqktirgw
      781 llrkkylrmr kaaiivqryv rghqarcyak flrrtkaati iqkywrmcva rrrykitrta
      841 tivlqsylrg ylarnryhki lrehkaviiq kwvrgwlart yyrrsihaii ylqccfrrmm
      901 akrelkklki earsverykk lhigmenkim qlqrkvdeqn kdykclmekl tnlegiynse
      961 teklrsdler lqlseeeaki atgrvlslqe eiaklrkdle qtqsekksie eradrykqet
     1021 eqlvsnlkee ntllkqeket lnhriveqak emtetmekkl veetkqleld lnderlryqn
     1081 llnefsrlee ryddlkeemt lmvnvpkpgh krtdsthssn eseytfssei aetedipsrt
     1141 eepsekkvpl dmslflklqk rvteleqekq vmqdeldrke eqvlrskake eerpqirgae
     1201 leyeslkrqe lesenkklkn elnelrkals eksapevtap gapayrvlme qltsvseeld
     1261 vrkeevlilr sqlvsqkeai qpkntmtdst illedvqkmk dkgeiaqayi glketnrlle
     1321 sqlqsqkrsh eneaealrge iqslkeennr qqqllaqnlq lppearieas lqheitrltn
     1381 enlyfeelya ddpkkyqsyr islykrmidl meqlekqdkt vrklkkqlkv fakkigelev
     1441 gqmenispgq tidepirpvn iprkekdfqg mleykkedeq klvknlilel kprgvavnli
     1501 pglpayilfm cvrhadylnd dqkvrsllts tinsikkvlk krgddfetvs fwlsntcrfl
     1561 hclkqysgee gfmkhntsrq nehcltnfdl aeyrqvlsdl aiqiyqqlvr vlenilqpmi
     1621 vsgmleheti qgvsgvkptg lrkrtssiad egtytldsil rqlnsfhsvm cqhgmdpeli
     1681 kqvvkqmfyi vgavtlnnll lrkdmcswsk gmqirynvsq leewlrdknl mnsgaketle
     1741 pliqaaqllq vkkktdddae aicsmcnalt taqivkvlnl ytpvnefeer vsvsfirtiq
     1801 mrlrdrkdsp qllmdakhif pvtfpfnpss laletiqipa slglgfisrv
//
LOCUS       XP_061013164            1825 aa            linear   MAM 02-DEC-2023
DEFINITION  unconventional myosin-Va isoform X4 [Dama dama].
ACCESSION   XP_061013164
VERSION     XP_061013164.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157181.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1825
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1825
                     /product="unconventional myosin-Va isoform X4"
                     /calculated_mol_wt=211708
     Region          7..1291
                     /region_name="COG5022"
                     /note="Myosin heavy chain [General function prediction
                     only]"
                     /db_xref="CDD:227355"
     Region          83..751
                     /region_name="MYSc_Myo5"
                     /note="class V myosin, motor domain; cd01380"
                     /db_xref="CDD:276831"
     Site            order(111..119,163..170,209..219,437..442)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276831"
     Site            111..119
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276831"
     Site            163..170
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276831"
     Site            209..219
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276831"
     Site            437..445
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276831"
     Site            order(466..477,480..489)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276831"
     Site            685..695
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276831"
     Site            order(706..716,736..751)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276831"
     Region          1156..>1464
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          1451..1825
                     /region_name="Myo5a_CBD"
                     /note="Cargo binding domain of myosin 5a; cd15478"
                     /db_xref="CDD:271262"
     Site            order(1468..1470,1473..1476,1646..1647,1805,1810,1812,
                     1814..1816)
                     /site_type="other"
                     /note="RILPL2 interface [polypeptide binding]"
                     /db_xref="CDD:271262"
     Site            order(1496,1499..1500,1503..1504,1507..1508,1511,1542,
                     1560..1565,1567..1568,1571)
                     /site_type="other"
                     /note="melanophilin interface [polypeptide binding]"
                     /db_xref="CDD:271262"
     CDS             1..1825
                     /gene="MYO5A"
                     /coded_by="XM_061157181.1:58..5535"
                     /db_xref="GeneID:133066277"
ORIGIN      
        1 maaselytkf arvwipdpee vwksaellkd ykpgdkvlll hledgkdley rldpktkelp
       61 hlrnpdilvg endltalsyl hepavlhnlr vrfidskliy tycgivlvai npyeqlpiyg
      121 ediinaysgq nmgdmdphif avaeeaykqm ardernqsii vsgesgagkt vsakyamryf
      181 atvsgsasea nveekvlasn pimesignak ttrndnssrf gkyieigfdk ryriiganmr
      241 tylleksrvv fqaeeernyh ifyqlcasan lpefkvlrlg dannfhytnq ggspmiegvd
      301 dakemahtrq actllgises yqmgifrila gilhlgnvvf msrdsdscti ppkheplsif
      361 cdlmgvdfee mchwlchrkl atatetyikp isklqatnar dalakhiyak lfnwivdhvn
      421 qalhsavkqh sfigvldiyg fetfeinsfe qfcinyanek lqqqfnmhvf kleqeeymke
      481 qipwtlidfy dnqpcinlie sklgildlld eeckmpkgtd dtwaqklynt hlnkcalfek
      541 prlsnkafii qhfadkveyq cegfleknkd tvfeeqikvl ksskfkmlpe lfqddekais
      601 ptsatssgrv pltripskpt kgrpgqtake hkktvghqfr nslhllmetl nattphyvrc
      661 ikpndfkfpf tfdekravqq lracgvleti risaagfpsr wtyqeffsry rvlmkqkdvl
      721 sdrkqtcknv leklivdkdk yqfgktkiff ragqvaylek lradklraac iriqktirgw
      781 llrkkylrmr kaaiivqryv rghqarcyak flrrtkaati iqkywrmcva rrrykitrta
      841 tivlqsylrg ylarnryhki lrehkaviiq kwvrgwlart yyrrsihaii ylqccfrrmm
      901 akrelkklki earsverykk lhigmenkim qlqrkvdeqn kdykclmekl tnlegiynse
      961 teklrsdler lqlseeeaki atgrvlslqe eiaklrkdle qtqsekksie eradrykqet
     1021 eqlvsnlkee ntllkqeket lnhriveqak emtetmekkl veetkqleld lnderlryqn
     1081 llnefsrlee ryddlkeemt lmvnvpkpgh krtdsthssn eseytfssei aetedipsrt
     1141 eepsekkvpl dmslflklqk rvteleqekq vmqdeldrke eqvlrskake eerpqirgae
     1201 leyeslkrqe lesenkklkn elnelrkals eksapevtap gapayrvlme qltsvseeld
     1261 vrkeevlilr sqlvsqkeai qpkntmtdst illedvqkmk dkgeiaqayi glketnrlle
     1321 sqlqsqkrsh eneaealrge iqslkeennr qqqllaqnlq lppearieas lqheitrltn
     1381 enldlmeqle kqdktvrklk kqlkvfakki gelevgqmen ispgqtidep irpvniprke
     1441 kdfqgmleyk kedeqklvkn lilelkprgv avnlipglpa yilfmcvrha dylnddqkvr
     1501 slltstinsi kkvlkkrgdd fetvsfwlsn tcrflhclkq ysgeegfmkh ntsrqnehcl
     1561 tnfdlaeyrq vlsdlaiqiy qqlvrvleni lqpmivsgml ehetiqgvsg vkptglrkrt
     1621 ssiadegtyt ldsilrqlns fhsvmcqhgm dpelikqvvk qmfyivgavt lnnlllrkdm
     1681 cswskgmqir ynvsqleewl rdknlmnsga ketlepliqa aqllqvkkkt dddaeaicsm
     1741 cnalttaqiv kvlnlytpvn efeervsvsf irtiqmrlrd rkdspqllmd akhifpvtfp
     1801 fnpsslalet iqipaslglg fisrv
//
LOCUS       XP_061013165             112 aa            linear   MAM 02-DEC-2023
DEFINITION  cAMP-regulated phosphoprotein 19 isoform X1 [Dama dama].
ACCESSION   XP_061013165
VERSION     XP_061013165.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157182.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..112
                     /product="cAMP-regulated phosphoprotein 19 isoform X1"
                     /calculated_mol_wt=12222
     Region          28..103
                     /region_name="Endosulfine"
                     /note="cAMP-regulated phosphoprotein/endosulfine conserved
                     region; pfam04667"
                     /db_xref="CDD:398375"
     CDS             1..112
                     /gene="ARPP19"
                     /coded_by="XM_061157182.1:30..368"
                     /db_xref="GeneID:133066278"
ORIGIN      
        1 msaevpeaas aeeqkemedk vtspekaeea klkaryphlg qkpggsdflr krlqkgqkyf
       61 dsgdynmaka kmknkqlpta tpdktevtgd hiptpqdlpq rkpslvaskl ag
//
LOCUS       XP_061013166             100 aa            linear   MAM 02-DEC-2023
DEFINITION  cAMP-regulated phosphoprotein 19 isoform X2 [Dama dama].
ACCESSION   XP_061013166
VERSION     XP_061013166.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157183.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..100
                     /product="cAMP-regulated phosphoprotein 19 isoform X2"
                     /calculated_mol_wt=11086
     Region          16..91
                     /region_name="Endosulfine"
                     /note="cAMP-regulated phosphoprotein/endosulfine conserved
                     region; pfam04667"
                     /db_xref="CDD:398375"
     CDS             1..100
                     /gene="ARPP19"
                     /coded_by="XM_061157183.1:149..451"
                     /db_xref="GeneID:133066278"
ORIGIN      
        1 myqemedkvt spekaeeakl karyphlgqk pggsdflrkr lqkgqkyfds gdynmakakm
       61 knkqlptatp dktevtgdhi ptpqdlpqrk pslvasklag
//
LOCUS       XP_061013167              96 aa            linear   MAM 02-DEC-2023
DEFINITION  cAMP-regulated phosphoprotein 19 isoform X3 [Dama dama].
ACCESSION   XP_061013167
VERSION     XP_061013167.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157184.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..96
                     /product="cAMP-regulated phosphoprotein 19 isoform X3"
                     /calculated_mol_wt=10534
     Region          12..87
                     /region_name="Endosulfine"
                     /note="cAMP-regulated phosphoprotein/endosulfine conserved
                     region; pfam04667"
                     /db_xref="CDD:398375"
     CDS             1..96
                     /gene="ARPP19"
                     /coded_by="XM_061157184.1:25..315"
                     /db_xref="GeneID:133066278"
ORIGIN      
        1 medkvtspek aeeaklkary phlgqkpggs dflrkrlqkg qkyfdsgdyn makakmknkq
       61 lptatpdkte vtgdhiptpq dlpqrkpslv asklag
//
LOCUS       XP_061013168             184 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein uL22-like [Dama dama].
ACCESSION   XP_061013168
VERSION     XP_061013168.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157185.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..184
                     /product="large ribosomal subunit protein uL22-like"
                     /calculated_mol_wt=21296
     Region          1..165
                     /region_name="PTZ00178"
                     /note="60S ribosomal protein L17; Provisional"
                     /db_xref="CDD:240306"
     Site            order(15..16,38..40,42..43,45..46,99..104,112..117,
                     149..150)
                     /site_type="active"
                     /note="putative translocon binding site [active]"
                     /db_xref="CDD:238205"
     Site            order(18,20,23,25..27,30,34,37,97,101,104,116,118..120,
                     122,125,137..142)
                     /site_type="other"
                     /note="protein-rRNA interface [nucleotide binding]"
                     /db_xref="CDD:238205"
     CDS             1..184
                     /gene="LOC133066279"
                     /coded_by="XM_061157185.1:40..594"
                     /db_xref="GeneID:133066279"
ORIGIN      
        1 mvrysldpen ptkscksrgs nlrvhfkntr etaqaikgmh irkatkylkd vtlkkqcvpf
       61 rrynggvgrc aqakqwgwtq grwpkksaef llhmlknaes naelkgldvd slviehiqvn
      121 kapkmrrrty rahgrinpym sspchiemil tekeqivpkp eeevaqkkki sqkklkkqkl
      181 mawe
//
LOCUS       XP_061013169            1095 aa            linear   MAM 02-DEC-2023
DEFINITION  atos homolog protein A isoform X1 [Dama dama].
ACCESSION   XP_061013169
VERSION     XP_061013169.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157186.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1095
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1095
                     /product="atos homolog protein A isoform X1"
                     /calculated_mol_wt=123487
     Region          897..954
                     /region_name="DUF4210"
                     /note="Domain of unknown function (DUF4210); pfam13915"
                     /db_xref="CDD:404751"
     Region          1037..1094
                     /region_name="Chromosome_seg"
                     /note="Chromosome segregation during meiosis; pfam13889"
                     /db_xref="CDD:464021"
     CDS             1..1095
                     /gene="ATOSA"
                     /coded_by="XM_061157186.1:118..3405"
                     /db_xref="GeneID:133066280"
ORIGIN      
        1 mvfsgnkglh redtldeyfe ydaeeflvsl allitegrtp ecsvkgrtes fhcppaqscy
       61 pittkhecsd klaqcrqarr trsevallwk nnlpimvevm llpdccysdd gpttegidln
      121 dpaikqdall lerwilepvp rqsgdrfiee ktlllavrsf vffsqlsawl svshgatprn
      181 ilyrisaadv dlqwnfsqtp iehvfpvpnv shnvalkvsv qslprqsnyp vltcsihtni
      241 glyekriqeh elkshqhrns teadhcstds sqrvcskqtw tmapesiilh akngttpeyn
      301 aavknvklyp gtgsksdygt sqgnilgfss igekkshets vrtlksfsvv dssdssrqss
      361 wqsvgetnpl igsliqdrqe viariaqhli hcdpstshis ghplniqess slnskllrvs
      421 qenesvrrck etfsvsfgsp eltssedtse gkirvkpetp qngtcisngl hsrqsvgetn
      481 plissllqgr qdiiariaqh lehidpmash mprqsfnmqd sssvpskvfr ssyedknllk
      541 knkddisvsi sntkfslldd isegknlisn kyfssfncns kvkpslqpqt rrnlykdnps
      601 eirstfqeiq nkatglitps nishcrennf dltirlentp secqfkkqei sdeidkehsn
      661 cnsidkqict nkykdkiine nynpesfnsr qcdnskkndl kvkvtvlems gylskhenec
      721 snkdpkrpkp ceqntqlnsi enylvkdseg fkckkldqlr neqdkkedpi densqnssqr
      781 knlkdclstc erlknkevlq rtiplkhssv wqkhnfhsld gtstrafhpr tglpllsspv
      841 pqrkaqsgcf dldssflhlk slssrspqpc lnieddpdih ekpllsssap pvtslsllgn
      901 feesvlnyrl dplgivdgft aevgasgvfc pthltlpvev sfysvsddna pspymgvitl
      961 eslgkrgyrv ppsgtiqvtl fnpnktvvkm fvviydlrdm panhqtflrq rtfsvpvkqe
     1021 mkrsvnkeni rhteerllry lihlrfqssk sgkiylhrdv rllfsrksme vdsgaayelk
     1081 sytesptnpq fsprc
//
LOCUS       XP_061013170            1094 aa            linear   MAM 02-DEC-2023
DEFINITION  atos homolog protein A isoform X2 [Dama dama].
ACCESSION   XP_061013170
VERSION     XP_061013170.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157187.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1094
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1094
                     /product="atos homolog protein A isoform X2"
                     /calculated_mol_wt=123359
     Region          896..953
                     /region_name="DUF4210"
                     /note="Domain of unknown function (DUF4210); pfam13915"
                     /db_xref="CDD:404751"
     Region          1036..1093
                     /region_name="Chromosome_seg"
                     /note="Chromosome segregation during meiosis; pfam13889"
                     /db_xref="CDD:464021"
     CDS             1..1094
                     /gene="ATOSA"
                     /coded_by="XM_061157187.1:118..3402"
                     /db_xref="GeneID:133066280"
ORIGIN      
        1 mvfsgnkglh redtldeyfe ydaeeflvsl allitegrtp ecsvkgrtes fhcppaqscy
       61 pittkhecsd klaqcrqarr trsevallwk nnlpimvevm llpdccysdd gpttegidln
      121 dpaikqdall lerwilepvp rqsgdrfiee ktlllavrsf vffsqlsawl svshgatprn
      181 ilyrisaadv dlqwnfsqtp iehvfpvpnv shnvalkvsv qslprqsnyp vltcsihtni
      241 glyekriqeh elkshqhrns teadhcstds sqrvcskqtw tmapesiilh akngttpeyn
      301 aavknvklyp gtgsksdygt sqgnilgfss igekkshets vrtlksfsvv dssdssrqss
      361 wqsvgetnpl igsliqdrqe viariaqhli hcdpstshis ghplniqess slnskllrvs
      421 qenesvrrck etfsvsfgsp eltssedtse gkirvkpetp qngtcisngl hsrqsvgetn
      481 plissllqgr qdiiariaqh lehidpmash mprqsfnmqd sssvpskvfr ssyedknllk
      541 knkddisvsi sntkfslldd isegknlisn kyfssfncns kvkpslqpqt rrnlykdnps
      601 eirstfqeiq nkatglitps nishcrennf dltirlentp secqfkkqei sdeidkehsn
      661 cnsidkqict nkykdkiine nynpesfnsr qcdnskkndl kvkvtvlems gylskhenec
      721 snkdpkrpkp ceqntqlnsi enylvkdseg fkckkldqlr neqdkkedpi densqnssqr
      781 knlkdclstc erlknkevlr tiplkhssvw qkhnfhsldg tstrafhprt glpllsspvp
      841 qrkaqsgcfd ldssflhlks lssrspqpcl nieddpdihe kpllsssapp vtslsllgnf
      901 eesvlnyrld plgivdgfta evgasgvfcp thltlpvevs fysvsddnap spymgvitle
      961 slgkrgyrvp psgtiqvtlf npnktvvkmf vviydlrdmp anhqtflrqr tfsvpvkqem
     1021 krsvnkenir hteerllryl ihlrfqssks gkiylhrdvr llfsrksmev dsgaayelks
     1081 ytesptnpqf sprc
//
LOCUS       XP_061013171            1088 aa            linear   MAM 02-DEC-2023
DEFINITION  atos homolog protein A isoform X3 [Dama dama].
ACCESSION   XP_061013171
VERSION     XP_061013171.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157188.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1088
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1088
                     /product="atos homolog protein A isoform X3"
                     /calculated_mol_wt=122759
     Region          890..947
                     /region_name="DUF4210"
                     /note="Domain of unknown function (DUF4210); pfam13915"
                     /db_xref="CDD:404751"
     Region          1030..1087
                     /region_name="Chromosome_seg"
                     /note="Chromosome segregation during meiosis; pfam13889"
                     /db_xref="CDD:464021"
     CDS             1..1088
                     /gene="ATOSA"
                     /coded_by="XM_061157188.1:939..4205"
                     /db_xref="GeneID:133066280"
ORIGIN      
        1 mkpdrdtlde yfeydaeefl vslalliteg rtpecsvkgr tesfhcppaq scypittkhe
       61 csdklaqcrq arrtrseval lwknnlpimv evmllpdccy sddgpttegi dlndpaikqd
      121 alllerwile pvprqsgdrf ieektlllav rsfvffsqls awlsvshgat prnilyrisa
      181 advdlqwnfs qtpiehvfpv pnvshnvalk vsvqslprqs nypvltcsih tniglyekri
      241 qehelkshqh rnsteadhcs tdssqrvcsk qtwtmapesi ilhakngttp eynaavknvk
      301 lypgtgsksd ygtsqgnilg fssigekksh etsvrtlksf svvdssdssr qsswqsvget
      361 npligsliqd rqeviariaq hlihcdpsts hisghplniq essslnskll rvsqenesvr
      421 rcketfsvsf gspeltssed tsegkirvkp etpqngtcis nglhsrqsvg etnplissll
      481 qgrqdiiari aqhlehidpm ashmprqsfn mqdsssvpsk vfrssyedkn llkknkddis
      541 vsisntkfsl lddisegknl isnkyfssfn cnskvkpslq pqtrrnlykd npseirstfq
      601 eiqnkatgli tpsnishcre nnfdltirle ntpsecqfkk qeisdeidke hsncnsidkq
      661 ictnkykdki inenynpesf nsrqcdnskk ndlkvkvtvl emsgylskhe necsnkdpkr
      721 pkpceqntql nsienylvkd segfkckkld qlrneqdkke dpidensqns sqrknlkdcl
      781 stcerlknke vlqrtiplkh ssvwqkhnfh sldgtstraf hprtglplls spvpqrkaqs
      841 gcfdldssfl hlkslssrsp qpclnieddp dihekpllss sappvtslsl lgnfeesvln
      901 yrldplgivd gftaevgasg vfcpthltlp vevsfysvsd dnapspymgv itleslgkrg
      961 yrvppsgtiq vtlfnpnktv vkmfvviydl rdmpanhqtf lrqrtfsvpv kqemkrsvnk
     1021 enirhteerl lrylihlrfq ssksgkiylh rdvrllfsrk smevdsgaay elksytespt
     1081 npqfsprc
//
LOCUS       XP_061013172            1088 aa            linear   MAM 02-DEC-2023
DEFINITION  atos homolog protein A isoform X3 [Dama dama].
ACCESSION   XP_061013172
VERSION     XP_061013172.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157189.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1088
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1088
                     /product="atos homolog protein A isoform X3"
                     /calculated_mol_wt=122759
     Region          890..947
                     /region_name="DUF4210"
                     /note="Domain of unknown function (DUF4210); pfam13915"
                     /db_xref="CDD:404751"
     Region          1030..1087
                     /region_name="Chromosome_seg"
                     /note="Chromosome segregation during meiosis; pfam13889"
                     /db_xref="CDD:464021"
     CDS             1..1088
                     /gene="ATOSA"
                     /coded_by="XM_061157189.1:1008..4274"
                     /db_xref="GeneID:133066280"
ORIGIN      
        1 mkpdrdtlde yfeydaeefl vslalliteg rtpecsvkgr tesfhcppaq scypittkhe
       61 csdklaqcrq arrtrseval lwknnlpimv evmllpdccy sddgpttegi dlndpaikqd
      121 alllerwile pvprqsgdrf ieektlllav rsfvffsqls awlsvshgat prnilyrisa
      181 advdlqwnfs qtpiehvfpv pnvshnvalk vsvqslprqs nypvltcsih tniglyekri
      241 qehelkshqh rnsteadhcs tdssqrvcsk qtwtmapesi ilhakngttp eynaavknvk
      301 lypgtgsksd ygtsqgnilg fssigekksh etsvrtlksf svvdssdssr qsswqsvget
      361 npligsliqd rqeviariaq hlihcdpsts hisghplniq essslnskll rvsqenesvr
      421 rcketfsvsf gspeltssed tsegkirvkp etpqngtcis nglhsrqsvg etnplissll
      481 qgrqdiiari aqhlehidpm ashmprqsfn mqdsssvpsk vfrssyedkn llkknkddis
      541 vsisntkfsl lddisegknl isnkyfssfn cnskvkpslq pqtrrnlykd npseirstfq
      601 eiqnkatgli tpsnishcre nnfdltirle ntpsecqfkk qeisdeidke hsncnsidkq
      661 ictnkykdki inenynpesf nsrqcdnskk ndlkvkvtvl emsgylskhe necsnkdpkr
      721 pkpceqntql nsienylvkd segfkckkld qlrneqdkke dpidensqns sqrknlkdcl
      781 stcerlknke vlqrtiplkh ssvwqkhnfh sldgtstraf hprtglplls spvpqrkaqs
      841 gcfdldssfl hlkslssrsp qpclnieddp dihekpllss sappvtslsl lgnfeesvln
      901 yrldplgivd gftaevgasg vfcpthltlp vevsfysvsd dnapspymgv itleslgkrg
      961 yrvppsgtiq vtlfnpnktv vkmfvviydl rdmpanhqtf lrqrtfsvpv kqemkrsvnk
     1021 enirhteerl lrylihlrfq ssksgkiylh rdvrllfsrk smevdsgaay elksytespt
     1081 npqfsprc
//
LOCUS       XP_061013173            1088 aa            linear   MAM 02-DEC-2023
DEFINITION  atos homolog protein A isoform X3 [Dama dama].
ACCESSION   XP_061013173
VERSION     XP_061013173.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157190.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1088
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1088
                     /product="atos homolog protein A isoform X3"
                     /calculated_mol_wt=122759
     Region          890..947
                     /region_name="DUF4210"
                     /note="Domain of unknown function (DUF4210); pfam13915"
                     /db_xref="CDD:404751"
     Region          1030..1087
                     /region_name="Chromosome_seg"
                     /note="Chromosome segregation during meiosis; pfam13889"
                     /db_xref="CDD:464021"
     CDS             1..1088
                     /gene="ATOSA"
                     /coded_by="XM_061157190.1:861..4127"
                     /db_xref="GeneID:133066280"
ORIGIN      
        1 mkpdrdtlde yfeydaeefl vslalliteg rtpecsvkgr tesfhcppaq scypittkhe
       61 csdklaqcrq arrtrseval lwknnlpimv evmllpdccy sddgpttegi dlndpaikqd
      121 alllerwile pvprqsgdrf ieektlllav rsfvffsqls awlsvshgat prnilyrisa
      181 advdlqwnfs qtpiehvfpv pnvshnvalk vsvqslprqs nypvltcsih tniglyekri
      241 qehelkshqh rnsteadhcs tdssqrvcsk qtwtmapesi ilhakngttp eynaavknvk
      301 lypgtgsksd ygtsqgnilg fssigekksh etsvrtlksf svvdssdssr qsswqsvget
      361 npligsliqd rqeviariaq hlihcdpsts hisghplniq essslnskll rvsqenesvr
      421 rcketfsvsf gspeltssed tsegkirvkp etpqngtcis nglhsrqsvg etnplissll
      481 qgrqdiiari aqhlehidpm ashmprqsfn mqdsssvpsk vfrssyedkn llkknkddis
      541 vsisntkfsl lddisegknl isnkyfssfn cnskvkpslq pqtrrnlykd npseirstfq
      601 eiqnkatgli tpsnishcre nnfdltirle ntpsecqfkk qeisdeidke hsncnsidkq
      661 ictnkykdki inenynpesf nsrqcdnskk ndlkvkvtvl emsgylskhe necsnkdpkr
      721 pkpceqntql nsienylvkd segfkckkld qlrneqdkke dpidensqns sqrknlkdcl
      781 stcerlknke vlqrtiplkh ssvwqkhnfh sldgtstraf hprtglplls spvpqrkaqs
      841 gcfdldssfl hlkslssrsp qpclnieddp dihekpllss sappvtslsl lgnfeesvln
      901 yrldplgivd gftaevgasg vfcpthltlp vevsfysvsd dnapspymgv itleslgkrg
      961 yrvppsgtiq vtlfnpnktv vkmfvviydl rdmpanhqtf lrqrtfsvpv kqemkrsvnk
     1021 enirhteerl lrylihlrfq ssksgkiylh rdvrllfsrk smevdsgaay elksytespt
     1081 npqfsprc
//
LOCUS       XP_061013174            1088 aa            linear   MAM 02-DEC-2023
DEFINITION  atos homolog protein A isoform X3 [Dama dama].
ACCESSION   XP_061013174
VERSION     XP_061013174.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157191.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1088
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1088
                     /product="atos homolog protein A isoform X3"
                     /calculated_mol_wt=122759
     Region          890..947
                     /region_name="DUF4210"
                     /note="Domain of unknown function (DUF4210); pfam13915"
                     /db_xref="CDD:404751"
     Region          1030..1087
                     /region_name="Chromosome_seg"
                     /note="Chromosome segregation during meiosis; pfam13889"
                     /db_xref="CDD:464021"
     CDS             1..1088
                     /gene="ATOSA"
                     /coded_by="XM_061157191.1:470..3736"
                     /db_xref="GeneID:133066280"
ORIGIN      
        1 mkpdrdtlde yfeydaeefl vslalliteg rtpecsvkgr tesfhcppaq scypittkhe
       61 csdklaqcrq arrtrseval lwknnlpimv evmllpdccy sddgpttegi dlndpaikqd
      121 alllerwile pvprqsgdrf ieektlllav rsfvffsqls awlsvshgat prnilyrisa
      181 advdlqwnfs qtpiehvfpv pnvshnvalk vsvqslprqs nypvltcsih tniglyekri
      241 qehelkshqh rnsteadhcs tdssqrvcsk qtwtmapesi ilhakngttp eynaavknvk
      301 lypgtgsksd ygtsqgnilg fssigekksh etsvrtlksf svvdssdssr qsswqsvget
      361 npligsliqd rqeviariaq hlihcdpsts hisghplniq essslnskll rvsqenesvr
      421 rcketfsvsf gspeltssed tsegkirvkp etpqngtcis nglhsrqsvg etnplissll
      481 qgrqdiiari aqhlehidpm ashmprqsfn mqdsssvpsk vfrssyedkn llkknkddis
      541 vsisntkfsl lddisegknl isnkyfssfn cnskvkpslq pqtrrnlykd npseirstfq
      601 eiqnkatgli tpsnishcre nnfdltirle ntpsecqfkk qeisdeidke hsncnsidkq
      661 ictnkykdki inenynpesf nsrqcdnskk ndlkvkvtvl emsgylskhe necsnkdpkr
      721 pkpceqntql nsienylvkd segfkckkld qlrneqdkke dpidensqns sqrknlkdcl
      781 stcerlknke vlqrtiplkh ssvwqkhnfh sldgtstraf hprtglplls spvpqrkaqs
      841 gcfdldssfl hlkslssrsp qpclnieddp dihekpllss sappvtslsl lgnfeesvln
      901 yrldplgivd gftaevgasg vfcpthltlp vevsfysvsd dnapspymgv itleslgkrg
      961 yrvppsgtiq vtlfnpnktv vkmfvviydl rdmpanhqtf lrqrtfsvpv kqemkrsvnk
     1021 enirhteerl lrylihlrfq ssksgkiylh rdvrllfsrk smevdsgaay elksytespt
     1081 npqfsprc
//
LOCUS       XP_061013175             163 aa            linear   MAM 02-DEC-2023
DEFINITION  probable ribosome biogenesis protein RLP24 [Dama dama].
ACCESSION   XP_061013175
VERSION     XP_061013175.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157192.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..163
                     /product="probable ribosome biogenesis protein RLP24"
                     /calculated_mol_wt=19466
     Region          2..64
                     /region_name="Ribosomal_L24e"
                     /note="Ribosomal protein L24e; pfam01246"
                     /db_xref="CDD:460131"
     CDS             1..163
                     /gene="RSL24D1"
                     /coded_by="XM_061157192.1:59..550"
                     /db_xref="GeneID:133066282"
ORIGIN      
        1 mriekcyfcs gpiypghgmm fvrndckvfr fckskchknf kkkrnprkvr wtkafrkaag
       61 keltvdnsfe fekrrnepvk yqrelwnkti damkrveeik qkrqakfimn rlkknkelqk
      121 vqdvkevkqn ihliraplag kgkqledkmv qklqedvdme dvs
//
LOCUS       XP_061013176             221 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-related protein Rab-27A [Dama dama].
ACCESSION   XP_061013176
VERSION     XP_061013176.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157193.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..221
                     /product="ras-related protein Rab-27A"
                     /calculated_mol_wt=24817
     Region          6..185
                     /region_name="Rab27A"
                     /note="Rab GTPase family 27a (Rab27a); cd04127"
                     /db_xref="CDD:206700"
     Site            6..11
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206700"
     Site            16..23
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206700"
     Site            order(19..24,134,136,164..165)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206700"
     Site            order(24..34,39..40)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206700"
     Site            order(34,39..47)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206700"
     Site            order(39,43..50,67,69)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206700"
     Site            41
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206700"
     Site            order(42,44..46,71,73,80..81,84,88,90..93)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206700"
     Site            order(42..43,45,73..74,81,83,85..87)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206700"
     Site            42..46
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206700"
     Site            69..73
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206700"
     Site            74..77
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206700"
     Site            order(77,79..89)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206700"
     Site            80..85
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206700"
     Site            88..92
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206700"
     Site            97..102
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206700"
     Site            120..130
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206700"
     Site            133..136
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206700"
     Site            163..165
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206700"
     Site            179..185
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206700"
     CDS             1..221
                     /gene="RAB27A"
                     /coded_by="XM_061157193.1:298..963"
                     /db_xref="GeneID:133066283"
ORIGIN      
        1 msdgdydyli kflalgdsgv gktsvlyqyt dgkfnskfit tvgidfrekr vvyrangpdg
       61 avgrgqrihl qlwdtagqer frslttaffr damgflllfd ltneqsflnv rnwisqlqmh
      121 aycenpdivl cgnksdledq rvvkeeearg laekygvpyf etsaangtni nqaietlldl
      181 imkrmercvd kswipegvvr snghtsadql neekekgscg c
//
LOCUS       XP_061013177             221 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-related protein Rab-27A [Dama dama].
ACCESSION   XP_061013177
VERSION     XP_061013177.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157194.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..221
                     /product="ras-related protein Rab-27A"
                     /calculated_mol_wt=24817
     Region          6..185
                     /region_name="Rab27A"
                     /note="Rab GTPase family 27a (Rab27a); cd04127"
                     /db_xref="CDD:206700"
     Site            6..11
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206700"
     Site            16..23
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206700"
     Site            order(19..24,134,136,164..165)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206700"
     Site            order(24..34,39..40)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206700"
     Site            order(34,39..47)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206700"
     Site            order(39,43..50,67,69)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206700"
     Site            41
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206700"
     Site            order(42,44..46,71,73,80..81,84,88,90..93)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206700"
     Site            order(42..43,45,73..74,81,83,85..87)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206700"
     Site            42..46
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206700"
     Site            69..73
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206700"
     Site            74..77
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206700"
     Site            order(77,79..89)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206700"
     Site            80..85
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206700"
     Site            88..92
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206700"
     Site            97..102
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206700"
     Site            120..130
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206700"
     Site            133..136
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206700"
     Site            163..165
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206700"
     Site            179..185
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206700"
     CDS             1..221
                     /gene="RAB27A"
                     /coded_by="XM_061157194.1:159..824"
                     /db_xref="GeneID:133066283"
ORIGIN      
        1 msdgdydyli kflalgdsgv gktsvlyqyt dgkfnskfit tvgidfrekr vvyrangpdg
       61 avgrgqrihl qlwdtagqer frslttaffr damgflllfd ltneqsflnv rnwisqlqmh
      121 aycenpdivl cgnksdledq rvvkeeearg laekygvpyf etsaangtni nqaietlldl
      181 imkrmercvd kswipegvvr snghtsadql neekekgscg c
//
LOCUS       XP_061013178             221 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-related protein Rab-27A [Dama dama].
ACCESSION   XP_061013178
VERSION     XP_061013178.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157195.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..221
                     /product="ras-related protein Rab-27A"
                     /calculated_mol_wt=24817
     Region          6..185
                     /region_name="Rab27A"
                     /note="Rab GTPase family 27a (Rab27a); cd04127"
                     /db_xref="CDD:206700"
     Site            6..11
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206700"
     Site            16..23
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206700"
     Site            order(19..24,134,136,164..165)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206700"
     Site            order(24..34,39..40)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206700"
     Site            order(34,39..47)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206700"
     Site            order(39,43..50,67,69)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206700"
     Site            41
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206700"
     Site            order(42,44..46,71,73,80..81,84,88,90..93)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206700"
     Site            order(42..43,45,73..74,81,83,85..87)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206700"
     Site            42..46
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206700"
     Site            69..73
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206700"
     Site            74..77
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206700"
     Site            order(77,79..89)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206700"
     Site            80..85
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206700"
     Site            88..92
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206700"
     Site            97..102
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206700"
     Site            120..130
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206700"
     Site            133..136
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206700"
     Site            163..165
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206700"
     Site            179..185
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206700"
     CDS             1..221
                     /gene="RAB27A"
                     /coded_by="XM_061157195.1:171..836"
                     /db_xref="GeneID:133066283"
ORIGIN      
        1 msdgdydyli kflalgdsgv gktsvlyqyt dgkfnskfit tvgidfrekr vvyrangpdg
       61 avgrgqrihl qlwdtagqer frslttaffr damgflllfd ltneqsflnv rnwisqlqmh
      121 aycenpdivl cgnksdledq rvvkeeearg laekygvpyf etsaangtni nqaietlldl
      181 imkrmercvd kswipegvvr snghtsadql neekekgscg c
//
LOCUS       XP_061013179             221 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-related protein Rab-27A [Dama dama].
ACCESSION   XP_061013179
VERSION     XP_061013179.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157196.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..221
                     /product="ras-related protein Rab-27A"
                     /calculated_mol_wt=24817
     Region          6..185
                     /region_name="Rab27A"
                     /note="Rab GTPase family 27a (Rab27a); cd04127"
                     /db_xref="CDD:206700"
     Site            6..11
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206700"
     Site            16..23
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206700"
     Site            order(19..24,134,136,164..165)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206700"
     Site            order(24..34,39..40)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206700"
     Site            order(34,39..47)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206700"
     Site            order(39,43..50,67,69)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206700"
     Site            41
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206700"
     Site            order(42,44..46,71,73,80..81,84,88,90..93)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206700"
     Site            order(42..43,45,73..74,81,83,85..87)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206700"
     Site            42..46
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206700"
     Site            69..73
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206700"
     Site            74..77
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206700"
     Site            order(77,79..89)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206700"
     Site            80..85
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206700"
     Site            88..92
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206700"
     Site            97..102
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206700"
     Site            120..130
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206700"
     Site            133..136
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206700"
     Site            163..165
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206700"
     Site            179..185
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206700"
     CDS             1..221
                     /gene="RAB27A"
                     /coded_by="XM_061157196.1:101..766"
                     /db_xref="GeneID:133066283"
ORIGIN      
        1 msdgdydyli kflalgdsgv gktsvlyqyt dgkfnskfit tvgidfrekr vvyrangpdg
       61 avgrgqrihl qlwdtagqer frslttaffr damgflllfd ltneqsflnv rnwisqlqmh
      121 aycenpdivl cgnksdledq rvvkeeearg laekygvpyf etsaangtni nqaietlldl
      181 imkrmercvd kswipegvvr snghtsadql neekekgscg c
//
LOCUS       XP_061013180             221 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-related protein Rab-27A [Dama dama].
ACCESSION   XP_061013180
VERSION     XP_061013180.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157197.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..221
                     /product="ras-related protein Rab-27A"
                     /calculated_mol_wt=24817
     Region          6..185
                     /region_name="Rab27A"
                     /note="Rab GTPase family 27a (Rab27a); cd04127"
                     /db_xref="CDD:206700"
     Site            6..11
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206700"
     Site            16..23
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206700"
     Site            order(19..24,134,136,164..165)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206700"
     Site            order(24..34,39..40)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206700"
     Site            order(34,39..47)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206700"
     Site            order(39,43..50,67,69)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206700"
     Site            41
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206700"
     Site            order(42,44..46,71,73,80..81,84,88,90..93)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206700"
     Site            order(42..43,45,73..74,81,83,85..87)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206700"
     Site            42..46
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206700"
     Site            69..73
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206700"
     Site            74..77
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206700"
     Site            order(77,79..89)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206700"
     Site            80..85
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206700"
     Site            88..92
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206700"
     Site            97..102
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206700"
     Site            120..130
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206700"
     Site            133..136
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206700"
     Site            163..165
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206700"
     Site            179..185
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206700"
     CDS             1..221
                     /gene="RAB27A"
                     /coded_by="XM_061157197.1:46..711"
                     /db_xref="GeneID:133066283"
ORIGIN      
        1 msdgdydyli kflalgdsgv gktsvlyqyt dgkfnskfit tvgidfrekr vvyrangpdg
       61 avgrgqrihl qlwdtagqer frslttaffr damgflllfd ltneqsflnv rnwisqlqmh
      121 aycenpdivl cgnksdledq rvvkeeearg laekygvpyf etsaangtni nqaietlldl
      181 imkrmercvd kswipegvvr snghtsadql neekekgscg c
//
LOCUS       XP_061013181             820 aa            linear   MAM 02-DEC-2023
DEFINITION  cell cycle progression protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061013181
VERSION     XP_061013181.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157198.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..820
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..820
                     /product="cell cycle progression protein 1 isoform X1"
                     /calculated_mol_wt=94695
     Region          86..>234
                     /region_name="PLN02328"
                     /note="lysine-specific histone demethylase 1 homolog"
                     /db_xref="CDD:215187"
     Region          <281..>529
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..820
                     /gene="CCPG1"
                     /coded_by="XM_061157198.1:146..2608"
                     /db_xref="GeneID:133066284"
ORIGIN      
        1 msenssdsds scgwtvinhe gsdiemvnse hgttsgtcep apecaslsqe elqelqleqg
       61 essqngtvll ggatypalee mksalegeee klpddnlyfg tvsddsdivt leppkledig
      121 nqeeaiivke aespedfnmg sssssqytfc qpetvfssqp sddesssdet shqpsptfrr
      181 rrarkktvss seseerllae qdpeppqelc krqfssglnk cvilalviai smgfghfygk
      241 rggnkgegti qiqkrqqlvk kihedelndm kdylsqcqqe qeslieyksl kenlarcwth
      301 teaekmsfet qkknldtenq ylrtslekee kalsslqeel rklreqiril edkgtstelv
      361 tenqklkqhl eeeklkthsf lnqretllae akmlrkeler erlitmalrv elqqlssshs
      421 ygspdspsvv tekkeiemlr erlaelerkl tfeqqrsdlw erlyveakdq nekqetdgkk
      481 kgnrgnhrak nksketflgs vketfdamkn stkefvrhhk ekikqakeav kenlkkfsds
      541 vkstfrhfkd ttknifdekg nkrfgatkea takkpttvys eylhpqykar tqnqnsrgpt
      601 mqregrkekp hfeefgkntn sqkcsaehdc ggnynsfrka csgvfecaqq esinlfnvkm
      661 lnpvridefr qliegyllek ldsfhhwkel dhfinkffln gvfihdqklf tdfvndvkdy
      721 lkdmkeyqvd ndgvfekldg yiyrhffght fsppygpsrp dkkqrmvnie ssrhrkqeqk
      781 hpqpqpykre gkwhkygrtn grhmanleie lgqlpfdpky
//
LOCUS       XP_061013182             811 aa            linear   MAM 02-DEC-2023
DEFINITION  cell cycle progression protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061013182
VERSION     XP_061013182.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157199.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..811
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..811
                     /product="cell cycle progression protein 1 isoform X2"
                     /calculated_mol_wt=93811
     Region          86..>234
                     /region_name="PLN02328"
                     /note="lysine-specific histone demethylase 1 homolog"
                     /db_xref="CDD:215187"
     Region          <272..>520
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..811
                     /gene="CCPG1"
                     /coded_by="XM_061157199.1:146..2581"
                     /db_xref="GeneID:133066284"
ORIGIN      
        1 msenssdsds scgwtvinhe gsdiemvnse hgttsgtcep apecaslsqe elqelqleqg
       61 essqngtvll ggatypalee mksalegeee klpddnlyfg tvsddsdivt leppkledig
      121 nqeeaiivke aespedfnmg sssssqytfc qpetvfssqp sddesssdet shqpsptfrr
      181 rrarkktvss seseerllae qdpeppqelc krqfssglnk cvilalviai smgfghfygt
      241 iqiqkrqqlv kkihedelnd mkdylsqcqq eqeslieyks lkenlarcwt hteaekmsfe
      301 tqkknldten qylrtsleke ekalsslqee lrklreqiri ledkgtstel vtenqklkqh
      361 leeeklkths flnqretlla eakmlrkele rerlitmalr velqqlsssh sygspdspsv
      421 vtekkeieml rerlaelerk ltfeqqrsdl werlyveakd qnekqetdgk kkgnrgnhra
      481 knksketflg svketfdamk nstkefvrhh kekikqakea vkenlkkfsd svkstfrhfk
      541 dttknifdek gnkrfgatke atakkpttvy seylhpqyka rtqnqnsrgp tmqregrkek
      601 phfeefgknt nsqkcsaehd cggnynsfrk acsgvfecaq qesinlfnvk mlnpvridef
      661 rqliegylle kldsfhhwke ldhfinkffl ngvfihdqkl ftdfvndvkd ylkdmkeyqv
      721 dndgvfekld gyiyrhffgh tfsppygpsr pdkkqrmvni essrhrkqeq khpqpqpykr
      781 egkwhkygrt ngrhmanlei elgqlpfdpk y
//
LOCUS       XP_061013183             795 aa            linear   MAM 02-DEC-2023
DEFINITION  cell cycle progression protein 1 isoform X3 [Dama dama].
ACCESSION   XP_061013183
VERSION     XP_061013183.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157200.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..795
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..795
                     /product="cell cycle progression protein 1 isoform X3"
                     /calculated_mol_wt=91710
     Region          86..>234
                     /region_name="PLN02328"
                     /note="lysine-specific histone demethylase 1 homolog"
                     /db_xref="CDD:215187"
     Region          <281..>529
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..795
                     /gene="CCPG1"
                     /coded_by="XM_061157200.1:146..2533"
                     /db_xref="GeneID:133066284"
ORIGIN      
        1 msenssdsds scgwtvinhe gsdiemvnse hgttsgtcep apecaslsqe elqelqleqg
       61 essqngtvll ggatypalee mksalegeee klpddnlyfg tvsddsdivt leppkledig
      121 nqeeaiivke aespedfnmg sssssqytfc qpetvfssqp sddesssdet shqpsptfrr
      181 rrarkktvss seseerllae qdpeppqelc krqfssglnk cvilalviai smgfghfygk
      241 rggnkgegti qiqkrqqlvk kihedelndm kdylsqcqqe qeslieyksl kenlarcwth
      301 teaekmsfet qkknldtenq ylrtslekee kalsslqeel rklreqiril edkgtstelv
      361 tenqklkqhl eeeklkthsf lnqretllae akmlrkeler erlitmalrv elqqlssshs
      421 ygspdspsvv tekkeiemlr erlaelerkl tfeqqrsdlw erlyveakdq nekqetdgkk
      481 kgnrgnhrak nksketflgs vketfdamkn stkefvrhhk ekikqakeav kenlkkfsds
      541 vkstfrhfkd ttknifdekg nkrfgatkea takkpttvys eylhpqykar tqnqnsrgpt
      601 mqregrkekp hfeefgkntn sqkcsaehdc ggnynsfrka csgvfecaqq esinlfnvkm
      661 lnpvridefr qliegyllek ldsfhhwkel dhfinkffln gvfihdqklf tdfvndvkdy
      721 lkdmkeyqvd ndgvfekldg yiyrhffght fsppygpsrp dkkqrmvnie ssrhrkqeqk
      781 hpqpqpykre epvdl
//
LOCUS       XP_061013184             542 aa            linear   MAM 02-DEC-2023
DEFINITION  GPI mannosyltransferase 3 isoform X1 [Dama dama].
ACCESSION   XP_061013184
VERSION     XP_061013184.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157201.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..542
                     /product="GPI mannosyltransferase 3 isoform X1"
                     /calculated_mol_wt=63607
     Region          54..523
                     /region_name="PMT_2"
                     /note="Dolichyl-phosphate-mannose-protein
                     mannosyltransferase; cl21590"
                     /db_xref="CDD:473917"
     CDS             1..542
                     /gene="PIGB"
                     /coded_by="XM_061157201.1:145..1773"
                     /db_xref="GeneID:133066286"
ORIGIN      
        1 merddrgggg lffrglqnrs hektklrtrk stlylspqrn tgrcgdllge niylvlfiia
       61 lricncflvq tsfvpdeywq slevahhmvf nygyltwewt erlrgytypl ifasiykilh
      121 llgkdsvhll iwiprlaqal lsaiadlrly slmkqlenqq vaqwvffcql cswftwycct
      181 rtltntmetv ltiialfyyp legsksmnsv kysslvalaf iirptavipw ipllfrhfwq
      241 eqrkldlilh qflpvgfvtl slsliidrif fgqwtlvqyn flkfnvlqdl gsfygshpwh
      301 wyfsqgfpav lgthlpffih gcflapkryr iflvtvlwtl lvysmlshke frfiypvlpf
      361 cmvfcgysln nlkiwkkpal sflflsnmll alytglvhqr gtldvmtniq elsynntsvs
      421 sasvlmmmpc hstpyyshvh yplpmrflqc ppdltgktdy lveadmfyln plkwlymefq
      481 ndsslpthli ifsvleeeis pflisnnyer tavffhthfp esrtgshiyv yerklkgkln
      541 qr
//
LOCUS       XP_061013185             538 aa            linear   MAM 02-DEC-2023
DEFINITION  GPI mannosyltransferase 3 isoform X2 [Dama dama].
ACCESSION   XP_061013185
VERSION     XP_061013185.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157202.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..538
                     /product="GPI mannosyltransferase 3 isoform X2"
                     /calculated_mol_wt=63081
     Region          54..519
                     /region_name="PMT_2"
                     /note="Dolichyl-phosphate-mannose-protein
                     mannosyltransferase; cl21590"
                     /db_xref="CDD:473917"
     CDS             1..538
                     /gene="PIGB"
                     /coded_by="XM_061157202.1:145..1761"
                     /db_xref="GeneID:133066286"
ORIGIN      
        1 merddrgggg lffrglqnrs hektklrtrk stlylspqrn tgrcgdllge niylvlfiia
       61 lricncflvq tsfvpdeywq slevahhmvf nygyltwewt erlrgytypl ifasiykilh
      121 llgkdsvhll iwiprlaqal lsaiadlrly slmkqlenqq vaqwvlcswf twycctrtlt
      181 ntmetvltii alfyyplegs ksmnsvkyss lvalafiirp tavipwipll frhfwqeqrk
      241 ldlilhqflp vgfvtlslsl iidriffgqw tlvqynflkf nvlqdlgsfy gshpwhwyfs
      301 qgfpavlgth lpffihgcfl apkryriflv tvlwtllvys mlshkefrfi ypvlpfcmvf
      361 cgyslnnlki wkkpalsflf lsnmllalyt glvhqrgtld vmtniqelsy nntsvssasv
      421 lmmmpchstp yyshvhyplp mrflqcppdl tgktdylvea dmfylnplkw lymefqndss
      481 lpthliifsv leeeispfli snnyertavf fhthfpesrt gshiyvyerk lkgklnqr
//
LOCUS       XP_061013186             527 aa            linear   MAM 02-DEC-2023
DEFINITION  GPI mannosyltransferase 3 isoform X3 [Dama dama].
ACCESSION   XP_061013186
VERSION     XP_061013186.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157203.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..527
                     /product="GPI mannosyltransferase 3 isoform X3"
                     /calculated_mol_wt=61712
     Region          54..508
                     /region_name="PMT_2"
                     /note="Dolichyl-phosphate-mannose-protein
                     mannosyltransferase; cl21590"
                     /db_xref="CDD:473917"
     CDS             1..527
                     /gene="PIGB"
                     /coded_by="XM_061157203.1:145..1728"
                     /db_xref="GeneID:133066286"
ORIGIN      
        1 merddrgggg lffrglqnrs hektklrtrk stlylspqrn tgrcgdllge niylvlfiia
       61 lricncflvq tsfvpdeywq slevahhmvf nygyltwewt erlrgytypl ifasiykilh
      121 llgkdsvhll iwiprlaqal lsaiadlrly slmkqlenqq vaqwvffcql cswftwycct
      181 rtltntmetv ltiialfyyp legsksmnsv kysslvalaf iirptavipw ipllfrhfwq
      241 eqrkldlilh qflpvgfvtl slsliidrif fgqdlgsfyg shpwhwyfsq gfpavlgthl
      301 pffihgcfla pkryriflvt vlwtllvysm lshkefrfiy pvlpfcmvfc gyslnnlkiw
      361 kkpalsflfl snmllalytg lvhqrgtldv mtniqelsyn ntsvssasvl mmmpchstpy
      421 yshvhyplpm rflqcppdlt gktdylvead mfylnplkwl ymefqndssl pthliifsvl
      481 eeeispflis nnyertavff hthfpesrtg shiyvyerkl kgklnqr
//
LOCUS       XP_061013188             511 aa            linear   MAM 02-DEC-2023
DEFINITION  GPI mannosyltransferase 3 isoform X4 [Dama dama].
ACCESSION   XP_061013188
VERSION     XP_061013188.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157205.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..511
                     /product="GPI mannosyltransferase 3 isoform X4"
                     /calculated_mol_wt=60094
     Region          54..492
                     /region_name="PMT_2"
                     /note="Dolichyl-phosphate-mannose-protein
                     mannosyltransferase; cl21590"
                     /db_xref="CDD:473917"
     CDS             1..511
                     /gene="PIGB"
                     /coded_by="XM_061157205.1:145..1680"
                     /db_xref="GeneID:133066286"
ORIGIN      
        1 merddrgggg lffrglqnrs hektklrtrk stlylspqrn tgrcgdllge niylvlfiia
       61 lricncflvq tsfvpdeywq slevahhmvf nygyltwewt erlrgytypl ifasiykilh
      121 llgkdsvhll iwiprlaqal lsaiadlrly slmkqlenqq vaqwvffcql cswftwycct
      181 rtltntmetv ltiialfyyp legsksmnsv kysslvalaf iirptavipw ipllfrhfwq
      241 eqrkldlilh qflpvgfvtl slsliidrif fgqwtlvqyn flkfnvlqdl gsfygshpwh
      301 wyfsqgfpav lgthlpffih gcflapkryr iflvtvlwtl lvysmlshke frfiypvlpf
      361 cmvfcvhqrg tldvmtniqe lsynntsvss asvlmmmpch stpyyshvhy plpmrflqcp
      421 pdltgktdyl veadmfylnp lkwlymefqn dsslpthlii fsvleeeisp flisnnyert
      481 avffhthfpe srtgshiyvy erklkgklnq r
//
LOCUS       XP_061013189              54 aa            linear   MAM 02-DEC-2023
DEFINITION  protein PIGBOS1 [Dama dama].
ACCESSION   XP_061013189
VERSION     XP_061013189.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157206.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..54
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..54
                     /product="protein PIGBOS1"
                     /calculated_mol_wt=6183
     Region          <2..>22
                     /region_name="MurJ"
                     /note="Lipid II flippase MurJ/MviN (peptidoglycan
                     biosynthesis) [Cell wall/membrane/envelope biogenesis];
                     COG0728"
                     /db_xref="CDD:440492"
     CDS             1..54
                     /gene="PIGBOS1"
                     /coded_by="XM_061157206.1:284..448"
                     /db_xref="GeneID:133066287"
ORIGIN      
        1 mfgrltfpql lfasllgiag giyiyqpife qysrdqkelk ekmklvqdse ekks
//
LOCUS       XP_061013190              54 aa            linear   MAM 02-DEC-2023
DEFINITION  protein PIGBOS1 [Dama dama].
ACCESSION   XP_061013190
VERSION     XP_061013190.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157207.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..54
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..54
                     /product="protein PIGBOS1"
                     /calculated_mol_wt=6183
     Region          <2..>22
                     /region_name="MurJ"
                     /note="Lipid II flippase MurJ/MviN (peptidoglycan
                     biosynthesis) [Cell wall/membrane/envelope biogenesis];
                     COG0728"
                     /db_xref="CDD:440492"
     CDS             1..54
                     /gene="PIGBOS1"
                     /coded_by="XM_061157207.1:295..459"
                     /db_xref="GeneID:133066287"
ORIGIN      
        1 mfgrltfpql lfasllgiag giyiyqpife qysrdqkelk ekmklvqdse ekks
//
LOCUS       XP_061013191             421 aa            linear   MAM 02-DEC-2023
DEFINITION  dynein axonemal assembly factor 4 isoform X1 [Dama dama].
ACCESSION   XP_061013191
VERSION     XP_061013191.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157208.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..421
                     /product="dynein axonemal assembly factor 4 isoform X1"
                     /calculated_mol_wt=48450
     Region          10..87
                     /region_name="p23_DYX1C1_like"
                     /note="p23_like domain found in proteins similar to
                     dyslexia susceptibility 1 (DYX1) candidate 1 (C1) protein,
                     DYX1C1. The human gene encoding this protein is a
                     positional candidate gene for developmental dyslexia (DD),
                     it is located on 15q21.3 by the DYX1 DD...; cd06469"
                     /db_xref="CDD:107226"
     Region          <266..>399
                     /region_name="NlpI"
                     /note="Lipoprotein NlpI, contains TPR repeats [Cell
                     wall/membrane/envelope biogenesis]; COG4785"
                     /db_xref="CDD:443815"
     Region          290..318
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(291,294..295,298..299,301,325,328..329,332..333,
                     335..336,367,370..371,374..375,378)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          323..353
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          364..394
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..421
                     /gene="DNAAF4"
                     /coded_by="XM_061157208.1:79..1344"
                     /db_xref="GeneID:133066289"
ORIGIN      
        1 mplqlsnysw rqtstavfis vplrgvsvrd advfctenyl kvnsppflfe vflyapidde
       61 sskakignni ivftlhkkea amwetlslsg vdkemmqrir eksilqaqer akeateakav
      121 arredqkytl gvmmkieeee rkkiedmken erikatkele awkecqrkae elkiiqreek
      181 lyhqekqmke erkklkhkcl tgnsasknla tkgrnsenif feklkedsip aprsvgsiki
      241 sftprvfpta lresqvaeee ewlhkqaear ramntdipel cdlkeeeknp ewlkdkgnkl
      301 famenylaai naynlairln nkipllylnr aachlklknl hkaiedsska leiltppvad
      361 nanarmkayi rrgtafcqle lyveglqdye aalkidpsnk ivqndaekir niiqgteles
      421 k
//
LOCUS       XP_061013192             376 aa            linear   MAM 02-DEC-2023
DEFINITION  dynein axonemal assembly factor 4 isoform X2 [Dama dama].
ACCESSION   XP_061013192
VERSION     XP_061013192.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157209.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..376
                     /product="dynein axonemal assembly factor 4 isoform X2"
                     /calculated_mol_wt=43747
     Region          10..87
                     /region_name="p23_DYX1C1_like"
                     /note="p23_like domain found in proteins similar to
                     dyslexia susceptibility 1 (DYX1) candidate 1 (C1) protein,
                     DYX1C1. The human gene encoding this protein is a
                     positional candidate gene for developmental dyslexia (DD),
                     it is located on 15q21.3 by the DYX1 DD...; cd06469"
                     /db_xref="CDD:107226"
     Region          276..>359
                     /region_name="3a0801s09"
                     /note="mitochondrial precursor proteins import receptor
                     (72 kDa mitochondrial outermembrane protein)
                     (mitochondrial import receptor for the ADP/ATP carrier)
                     (translocase of outermembrane tom70); TIGR00990"
                     /db_xref="CDD:273380"
     Region          290..318
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          323..353
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..376
                     /gene="DNAAF4"
                     /coded_by="XM_061157209.1:79..1209"
                     /db_xref="GeneID:133066289"
ORIGIN      
        1 mplqlsnysw rqtstavfis vplrgvsvrd advfctenyl kvnsppflfe vflyapidde
       61 sskakignni ivftlhkkea amwetlslsg vdkemmqrir eksilqaqer akeateakav
      121 arredqkytl gvmmkieeee rkkiedmken erikatkele awkecqrkae elkiiqreek
      181 lyhqekqmke erkklkhkcl tgnsasknla tkgrnsenif feklkedsip aprsvgsiki
      241 sftprvfpta lresqvaeee ewlhkqaear ramntdipel cdlkeeeknp ewlkdkgnkl
      301 famenylaai naynlairln nkipllylnr aachlklknl hkaiedsska frimklllrl
      361 ihptklykmm lrrfgi
//
LOCUS       XP_061013193             472 aa            linear   MAM 02-DEC-2023
DEFINITION  pygopus homolog 1 isoform X1 [Dama dama].
ACCESSION   XP_061013193
VERSION     XP_061013193.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157210.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..472
                     /product="pygopus homolog 1 isoform X1"
                     /calculated_mol_wt=51068
     Region          <197..>384
                     /region_name="PTZ00395"
                     /note="Sec24-related protein; Provisional"
                     /db_xref="CDD:185594"
     Region          394..450
                     /region_name="PHD_PYGO1"
                     /note="PHD finger found in pygopus homolog 1 (PYGO1);
                     cd15635"
                     /db_xref="CDD:277105"
     Site            order(394,403..405,407,409..411,413,419,432,435..436,438,
                     441)
                     /site_type="other"
                     /note="H3K4me binding site [polypeptide binding]"
                     /db_xref="CDD:277105"
     Site            order(425..428,431,434..435,438,440..444,449)
                     /site_type="other"
                     /note="BCL9 HD1 interface [polypeptide binding]"
                     /db_xref="CDD:277105"
     CDS             1..472
                     /gene="PYGO1"
                     /coded_by="XM_061157210.1:16..1434"
                     /db_xref="GeneID:133066290"
ORIGIN      
        1 mpaphekekl ysfktlssvg lwirskspqi sfytrsvgcl llrtrvrnfp aallrnirgn
       61 vcqtkdtacg dsgldglggp gvqlgspdkk krktntqgps fpplseyapp pnpnsdhlva
      121 anpfddnynt isykplpssn pylgpgypgf ggystfrmpp hvpprmsspy cgpyslrnqp
      181 hpfpqnplgm gfnrphafnf gphdnssfgn psynnaltqn vnmpnqhfrq npaenfnqip
      241 pqnasqvsnp dlasnfvpgs nsnfssples nhsfipppnt fgqakapppk qdfsqgatkn
      301 tnqnssahpp hlnmddtvnq snielknvnr nnvvsqensr sssaeatnss hangtqskpr
      361 qprgatdvtc taeksaksal hpsrhghsss dpvypcgict nevnddqdai lceascqkwf
      421 hrictgmtet ayglltaeas avwgcdtcma dkdvqlmrtr etfgppavgg da
//
LOCUS       XP_061013194             420 aa            linear   MAM 02-DEC-2023
DEFINITION  pygopus homolog 1 isoform X2 [Dama dama].
ACCESSION   XP_061013194
VERSION     XP_061013194.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157211.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..420
                     /product="pygopus homolog 1 isoform X2"
                     /calculated_mol_wt=45156
     Region          <145..>332
                     /region_name="PTZ00395"
                     /note="Sec24-related protein; Provisional"
                     /db_xref="CDD:185594"
     Region          342..398
                     /region_name="PHD_PYGO1"
                     /note="PHD finger found in pygopus homolog 1 (PYGO1);
                     cd15635"
                     /db_xref="CDD:277105"
     Site            order(342,351..353,355,357..359,361,367,380,383..384,386,
                     389)
                     /site_type="other"
                     /note="H3K4me binding site [polypeptide binding]"
                     /db_xref="CDD:277105"
     Site            order(373..376,379,382..383,386,388..392,397)
                     /site_type="other"
                     /note="BCL9 HD1 interface [polypeptide binding]"
                     /db_xref="CDD:277105"
     CDS             1..420
                     /gene="PYGO1"
                     /coded_by="XM_061157211.1:177..1439"
                     /db_xref="GeneID:133066290"
ORIGIN      
        1 msaeqekdpi slkrvrggds gldglggpgv qlgspdkkkr ktntqgpsfp plseyapppn
       61 pnsdhlvaan pfddnyntis ykplpssnpy lgpgypgfgg ystfrmpphv pprmsspycg
      121 pyslrnqphp fpqnplgmgf nrphafnfgp hdnssfgnps ynnaltqnvn mpnqhfrqnp
      181 aenfnqippq nasqvsnpdl asnfvpgsns nfssplesnh sfipppntfg qakapppkqd
      241 fsqgatkntn qnssahpphl nmddtvnqsn ielknvnrnn vvsqensrss saeatnssha
      301 ngtqskprqp rgatdvtcta eksaksalhp srhghsssdp vypcgictne vnddqdailc
      361 eascqkwfhr ictgmtetay glltaeasav wgcdtcmadk dvqlmrtret fgppavggda
//
LOCUS       XP_061013195            1321 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase NEDD4 isoform X1 [Dama dama].
ACCESSION   XP_061013195
VERSION     XP_061013195.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157212.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1321
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1321
                     /product="E3 ubiquitin-protein ligase NEDD4 isoform X1"
                     /calculated_mol_wt=148405
     Region          <518..571
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     Region          612..644
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(628,639)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          770..799
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          844..873
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          895..927
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(911,922)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Site            order(970,1001,1012,1074,1247,1282..1283,1286..1290,1310,
                     1317)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Region          988..1317
                     /region_name="HECTc"
                     /note="Domain Homologous to E6-AP Carboxyl Terminus with;
                     smart00119"
                     /db_xref="CDD:214523"
     Site            order(1102,1105..1106,1108..1109,1112,1117,1119,
                     1123..1124,1125,1131,1136,1153,1157)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..1321
                     /gene="NEDD4"
                     /coded_by="XM_061157212.1:194..4159"
                     /db_xref="GeneID:133066292"
ORIGIN      
        1 maqslrlhfa arrsntypls easgddldss ihmcftrptr isaanvvqmk ltpkqtalap
       61 likenlksre rssfpspenv hkkssclqis lqptrysgcl qpgsvladgd dasftcvlkd
      121 gsavvdneln amgggdllss palcsgglsn fsasengscs sngsdygsct sitsggsctn
      181 silsdssgyt fpptddtffg gnlssdsasn rsvpnrnttp ceifsrstst vpfvqddldh
      241 gleimklpvs rnskiplkrc sslvifprsp sntpptspts tgtllskgsy qtshqfiisp
      301 seiahnedgt sakgflstav nglrlsktvc tpgevrdirp lhrkgslqkk iiiannspnq
      361 tvcekpsegy scvslhftqq kataldceaa ngdckpemse telnsdpeli klmhrtsacl
      421 pssqnvdyqi ningqlerpn lqinknhall qrsislggty pnasclsslk hncskggpsq
      481 llikfasgne gkvdnltrds nrdftnelpn slkhscktrd dflgqvdvpl yplptenprm
      541 erpytfkdfv lhprshksrv kgylrlkmty lpktsgsedd nteqaeelep gwvvldqpda
      601 achlqqqqep splppgweer qdilgrtyyv nhesrrtqwk rptpqdnltd aengniqlqa
      661 qrafttrrqi seetesvdnr essenweiir edeatmyghq tfpssppsnn ldvqthlaee
      721 lnarltvggn sasgqpvsns nhssrrgslq aytfeeqptl pvllptssgl ppgweekqde
      781 rgrsyyvdhn crtttwikpt vqatvetgql lssqgssagp qpqapasdaa qqvtqpseme
      841 qgflpkgwev rhapngrpff idhntktttw edprlkipah lrgktsldss sdlgplppgw
      901 eerthtdgri fyinhnskkt qwedprlqhv aitgpavpys rdykrkyeff rrklkkqndi
      961 pnkfemklrr atvledsyrr vmgvkradfl karlwiefdg ekgldyggva rewffliske
     1021 mfnpyyglfe ysatdnytlq inpnsglcne dhlsyfkfig rvagmavyhg klldgffirp
     1081 fykmmlhkpi tlhdmesvds eyynslrwil endpteldlr fvideelfgq thqhelkngg
     1141 seivvtnknk keyiylviqw rfvnriqkqm aafkegffel ipqdlikifd enelellmcg
     1201 lgdvdvndwr ehtkykngys inhqviqwfw kavlmmdsek rirllqfvtg tsrvpmngfa
     1261 elygsngpqs ftveqwgtpe klprahtcfn rldlppyesf eelwdklqma ientqgfdgv
     1321 d
//
LOCUS       XP_061013196             901 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase NEDD4 isoform X2 [Dama dama].
ACCESSION   XP_061013196
VERSION     XP_061013196.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157213.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..901
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..901
                     /product="E3 ubiquitin-protein ligase NEDD4 isoform X2"
                     /calculated_mol_wt=104086
     Region          20..151
                     /region_name="C2_NEDD4_NEDD4L"
                     /note="C2 domain present in the Human neural precursor
                     cell-expressed, developmentally down-regulated 4 (NEDD4)
                     and NEDD4-like (NEDD4L/NEDD42); cd04033"
                     /db_xref="CDD:175999"
     Site            order(41,93,95,100)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175999"
     Region          192..224
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(208,219)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          350..379
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          424..453
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          475..507
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(491,502)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Site            order(550,581,592,654,827,862..863,866..870,890,897)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Region          568..897
                     /region_name="HECTc"
                     /note="Domain Homologous to E6-AP Carboxyl Terminus with;
                     smart00119"
                     /db_xref="CDD:214523"
     Site            order(682,685..686,688..689,692,697,699,703..704,705,711,
                     716,733,737)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..901
                     /gene="NEDD4"
                     /coded_by="XM_061157213.1:109..2814"
                     /db_xref="GeneID:133066292"
ORIGIN      
        1 matgavevfg lpedeensri vrvkviagig lakkdilgas dpyvrvtlyd pmngvftsvq
       61 tktlkktlnp kwneeilfrv hpqqhrllfe vfdenrltrd dflgqvdvpl yplptenprm
      121 erpytfkdfv lhprshksrv kgylrlkmty lpktsgsedd nteqaeelep gwvvldqpda
      181 achlqqqqep splppgweer qdilgrtyyv nhesrrtqwk rptpqdnltd aengniqlqa
      241 qrafttrrqi seetesvdnr essenweiir edeatmyghq tfpssppsnn ldvqthlaee
      301 lnarltvggn sasgqpvsns nhssrrgslq aytfeeqptl pvllptssgl ppgweekqde
      361 rgrsyyvdhn crtttwikpt vqatvetgql lssqgssagp qpqapasdaa qqvtqpseme
      421 qgflpkgwev rhapngrpff idhntktttw edprlkipah lrgktsldss sdlgplppgw
      481 eerthtdgri fyinhnskkt qwedprlqhv aitgpavpys rdykrkyeff rrklkkqndi
      541 pnkfemklrr atvledsyrr vmgvkradfl karlwiefdg ekgldyggva rewffliske
      601 mfnpyyglfe ysatdnytlq inpnsglcne dhlsyfkfig rvagmavyhg klldgffirp
      661 fykmmlhkpi tlhdmesvds eyynslrwil endpteldlr fvideelfgq thqhelkngg
      721 seivvtnknk keyiylviqw rfvnriqkqm aafkegffel ipqdlikifd enelellmcg
      781 lgdvdvndwr ehtkykngys inhqviqwfw kavlmmdsek rirllqfvtg tsrvpmngfa
      841 elygsngpqs ftveqwgtpe klprahtcfn rldlppyesf eelwdklqma ientqgfdgv
      901 d
//
LOCUS       XP_061013197             857 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase NEDD4 isoform X3 [Dama dama].
ACCESSION   XP_061013197
VERSION     XP_061013197.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157214.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..857
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..857
                     /product="E3 ubiquitin-protein ligase NEDD4 isoform X3"
                     /calculated_mol_wt=99625
     Region          <23..107
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     Region          148..180
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(164,175)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          306..335
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          380..409
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          431..463
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(447,458)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Site            order(506,537,548,610,783,818..819,822..826,846,853)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Region          524..853
                     /region_name="HECTc"
                     /note="Domain Homologous to E6-AP Carboxyl Terminus with;
                     smart00119"
                     /db_xref="CDD:214523"
     Site            order(638,641..642,644..645,648,653,655,659..660,661,667,
                     672,689,693)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..857
                     /gene="NEDD4"
                     /coded_by="XM_061157214.1:166..2739"
                     /db_xref="GeneID:133066292"
ORIGIN      
        1 meflqvckqk plksytvfiv fqtlnpkwne eilfrvhpqq hrllfevfde nrltrddflg
       61 qvdvplyplp tenprmerpy tfkdfvlhpr shksrvkgyl rlkmtylpkt sgseddnteq
      121 aeelepgwvv ldqpdaachl qqqqepsplp pgweerqdil grtyyvnhes rrtqwkrptp
      181 qdnltdaeng niqlqaqraf ttrrqiseet esvdnresse nweiiredea tmyghqtfps
      241 sppsnnldvq thlaeelnar ltvggnsasg qpvsnsnhss rrgslqaytf eeqptlpvll
      301 ptssglppgw eekqdergrs yyvdhncrtt twikptvqat vetgqllssq gssagpqpqa
      361 pasdaaqqvt qpsemeqgfl pkgwevrhap ngrpffidhn tktttwedpr lkipahlrgk
      421 tsldsssdlg plppgweert htdgrifyin hnskktqwed prlqhvaitg pavpysrdyk
      481 rkyeffrrkl kkqndipnkf emklrratvl edsyrrvmgv kradflkarl wiefdgekgl
      541 dyggvarewf fliskemfnp yyglfeysat dnytlqinpn sglcnedhls yfkfigrvag
      601 mavyhgklld gffirpfykm mlhkpitlhd mesvdseyyn slrwilendp teldlrfvid
      661 eelfgqthqh elknggseiv vtnknkkeyi ylviqwrfvn riqkqmaafk egffelipqd
      721 likifdenel ellmcglgdv dvndwrehtk ykngysinhq viqwfwkavl mmdsekrirl
      781 lqfvtgtsrv pmngfaelyg sngpqsftve qwgtpeklpr ahtcfnrldl ppyesfeelw
      841 dklqmaient qgfdgvd
//
LOCUS       XP_061013198             857 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase NEDD4 isoform X3 [Dama dama].
ACCESSION   XP_061013198
VERSION     XP_061013198.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157215.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..857
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..857
                     /product="E3 ubiquitin-protein ligase NEDD4 isoform X3"
                     /calculated_mol_wt=99625
     Region          <23..107
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     Region          148..180
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(164,175)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          306..335
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          380..409
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          431..463
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(447,458)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Site            order(506,537,548,610,783,818..819,822..826,846,853)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Region          524..853
                     /region_name="HECTc"
                     /note="Domain Homologous to E6-AP Carboxyl Terminus with;
                     smart00119"
                     /db_xref="CDD:214523"
     Site            order(638,641..642,644..645,648,653,655,659..660,661,667,
                     672,689,693)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..857
                     /gene="NEDD4"
                     /coded_by="XM_061157215.1:409..2982"
                     /db_xref="GeneID:133066292"
ORIGIN      
        1 meflqvckqk plksytvfiv fqtlnpkwne eilfrvhpqq hrllfevfde nrltrddflg
       61 qvdvplyplp tenprmerpy tfkdfvlhpr shksrvkgyl rlkmtylpkt sgseddnteq
      121 aeelepgwvv ldqpdaachl qqqqepsplp pgweerqdil grtyyvnhes rrtqwkrptp
      181 qdnltdaeng niqlqaqraf ttrrqiseet esvdnresse nweiiredea tmyghqtfps
      241 sppsnnldvq thlaeelnar ltvggnsasg qpvsnsnhss rrgslqaytf eeqptlpvll
      301 ptssglppgw eekqdergrs yyvdhncrtt twikptvqat vetgqllssq gssagpqpqa
      361 pasdaaqqvt qpsemeqgfl pkgwevrhap ngrpffidhn tktttwedpr lkipahlrgk
      421 tsldsssdlg plppgweert htdgrifyin hnskktqwed prlqhvaitg pavpysrdyk
      481 rkyeffrrkl kkqndipnkf emklrratvl edsyrrvmgv kradflkarl wiefdgekgl
      541 dyggvarewf fliskemfnp yyglfeysat dnytlqinpn sglcnedhls yfkfigrvag
      601 mavyhgklld gffirpfykm mlhkpitlhd mesvdseyyn slrwilendp teldlrfvid
      661 eelfgqthqh elknggseiv vtnknkkeyi ylviqwrfvn riqkqmaafk egffelipqd
      721 likifdenel ellmcglgdv dvndwrehtk ykngysinhq viqwfwkavl mmdsekrirl
      781 lqfvtgtsrv pmngfaelyg sngpqsftve qwgtpeklpr ahtcfnrldl ppyesfeelw
      841 dklqmaient qgfdgvd
//
LOCUS       XP_061013199             857 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase NEDD4 isoform X3 [Dama dama].
ACCESSION   XP_061013199
VERSION     XP_061013199.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157216.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..857
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..857
                     /product="E3 ubiquitin-protein ligase NEDD4 isoform X3"
                     /calculated_mol_wt=99625
     Region          <23..107
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     Region          148..180
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(164,175)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          306..335
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          380..409
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          431..463
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(447,458)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Site            order(506,537,548,610,783,818..819,822..826,846,853)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Region          524..853
                     /region_name="HECTc"
                     /note="Domain Homologous to E6-AP Carboxyl Terminus with;
                     smart00119"
                     /db_xref="CDD:214523"
     Site            order(638,641..642,644..645,648,653,655,659..660,661,667,
                     672,689,693)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..857
                     /gene="NEDD4"
                     /coded_by="XM_061157216.1:370..2943"
                     /db_xref="GeneID:133066292"
ORIGIN      
        1 meflqvckqk plksytvfiv fqtlnpkwne eilfrvhpqq hrllfevfde nrltrddflg
       61 qvdvplyplp tenprmerpy tfkdfvlhpr shksrvkgyl rlkmtylpkt sgseddnteq
      121 aeelepgwvv ldqpdaachl qqqqepsplp pgweerqdil grtyyvnhes rrtqwkrptp
      181 qdnltdaeng niqlqaqraf ttrrqiseet esvdnresse nweiiredea tmyghqtfps
      241 sppsnnldvq thlaeelnar ltvggnsasg qpvsnsnhss rrgslqaytf eeqptlpvll
      301 ptssglppgw eekqdergrs yyvdhncrtt twikptvqat vetgqllssq gssagpqpqa
      361 pasdaaqqvt qpsemeqgfl pkgwevrhap ngrpffidhn tktttwedpr lkipahlrgk
      421 tsldsssdlg plppgweert htdgrifyin hnskktqwed prlqhvaitg pavpysrdyk
      481 rkyeffrrkl kkqndipnkf emklrratvl edsyrrvmgv kradflkarl wiefdgekgl
      541 dyggvarewf fliskemfnp yyglfeysat dnytlqinpn sglcnedhls yfkfigrvag
      601 mavyhgklld gffirpfykm mlhkpitlhd mesvdseyyn slrwilendp teldlrfvid
      661 eelfgqthqh elknggseiv vtnknkkeyi ylviqwrfvn riqkqmaafk egffelipqd
      721 likifdenel ellmcglgdv dvndwrehtk ykngysinhq viqwfwkavl mmdsekrirl
      781 lqfvtgtsrv pmngfaelyg sngpqsftve qwgtpeklpr ahtcfnrldl ppyesfeelw
      841 dklqmaient qgfdgvd
//
LOCUS       XP_061013200             850 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase NEDD4 isoform X4 [Dama dama].
ACCESSION   XP_061013200
VERSION     XP_061013200.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157217.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..850
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..850
                     /product="E3 ubiquitin-protein ligase NEDD4 isoform X4"
                     /calculated_mol_wt=98630
     Region          <1..100
                     /region_name="C2_NEDD4_NEDD4L"
                     /note="C2 domain present in the Human neural precursor
                     cell-expressed, developmentally down-regulated 4 (NEDD4)
                     and NEDD4-like (NEDD4L/NEDD42); cd04033"
                     /db_xref="CDD:175999"
     Region          141..173
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(157,168)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          299..328
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          373..402
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          424..456
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(440,451)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Site            order(499,530,541,603,776,811..812,815..819,839,846)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Region          517..846
                     /region_name="HECTc"
                     /note="Domain Homologous to E6-AP Carboxyl Terminus with;
                     smart00119"
                     /db_xref="CDD:214523"
     Site            order(631,634..635,637..638,641,646,648,652..653,654,660,
                     665,682,686)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..850
                     /gene="NEDD4"
                     /coded_by="XM_061157217.1:235..2787"
                     /db_xref="GeneID:133066292"
ORIGIN      
        1 mngvftsvqt ktlkktlnpk wneeilfrvh pqqhrllfev fdenrltrdd flgqvdvply
       61 plptenprme rpytfkdfvl hprshksrvk gylrlkmtyl pktsgseddn teqaeelepg
      121 wvvldqpdaa chlqqqqeps plppgweerq dilgrtyyvn hesrrtqwkr ptpqdnltda
      181 engniqlqaq rafttrrqis eetesvdnre ssenweiire deatmyghqt fpssppsnnl
      241 dvqthlaeel narltvggns asgqpvsnsn hssrrgslqa ytfeeqptlp vllptssglp
      301 pgweekqder grsyyvdhnc rtttwikptv qatvetgqll ssqgssagpq pqapasdaaq
      361 qvtqpsemeq gflpkgwevr hapngrpffi dhntktttwe dprlkipahl rgktsldsss
      421 dlgplppgwe erthtdgrif yinhnskktq wedprlqhva itgpavpysr dykrkyeffr
      481 rklkkqndip nkfemklrra tvledsyrrv mgvkradflk arlwiefdge kgldyggvar
      541 ewffliskem fnpyyglfey satdnytlqi npnsglcned hlsyfkfigr vagmavyhgk
      601 lldgffirpf ykmmlhkpit lhdmesvdse yynslrwile ndpteldlrf videelfgqt
      661 hqhelknggs eivvtnknkk eyiylviqwr fvnriqkqma afkegffeli pqdlikifde
      721 nelellmcgl gdvdvndwre htkykngysi nhqviqwfwk avlmmdsekr irllqfvtgt
      781 srvpmngfae lygsngpqsf tveqwgtpek lprahtcfnr ldlppyesfe elwdklqmai
      841 entqgfdgvd
//
LOCUS       XP_061013201             850 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase NEDD4 isoform X4 [Dama dama].
ACCESSION   XP_061013201
VERSION     XP_061013201.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157218.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..850
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..850
                     /product="E3 ubiquitin-protein ligase NEDD4 isoform X4"
                     /calculated_mol_wt=98630
     Region          <1..100
                     /region_name="C2_NEDD4_NEDD4L"
                     /note="C2 domain present in the Human neural precursor
                     cell-expressed, developmentally down-regulated 4 (NEDD4)
                     and NEDD4-like (NEDD4L/NEDD42); cd04033"
                     /db_xref="CDD:175999"
     Region          141..173
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(157,168)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          299..328
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          373..402
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          424..456
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(440,451)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Site            order(499,530,541,603,776,811..812,815..819,839,846)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Region          517..846
                     /region_name="HECTc"
                     /note="Domain Homologous to E6-AP Carboxyl Terminus with;
                     smart00119"
                     /db_xref="CDD:214523"
     Site            order(631,634..635,637..638,641,646,648,652..653,654,660,
                     665,682,686)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..850
                     /gene="NEDD4"
                     /coded_by="XM_061157218.1:404..2956"
                     /db_xref="GeneID:133066292"
ORIGIN      
        1 mngvftsvqt ktlkktlnpk wneeilfrvh pqqhrllfev fdenrltrdd flgqvdvply
       61 plptenprme rpytfkdfvl hprshksrvk gylrlkmtyl pktsgseddn teqaeelepg
      121 wvvldqpdaa chlqqqqeps plppgweerq dilgrtyyvn hesrrtqwkr ptpqdnltda
      181 engniqlqaq rafttrrqis eetesvdnre ssenweiire deatmyghqt fpssppsnnl
      241 dvqthlaeel narltvggns asgqpvsnsn hssrrgslqa ytfeeqptlp vllptssglp
      301 pgweekqder grsyyvdhnc rtttwikptv qatvetgqll ssqgssagpq pqapasdaaq
      361 qvtqpsemeq gflpkgwevr hapngrpffi dhntktttwe dprlkipahl rgktsldsss
      421 dlgplppgwe erthtdgrif yinhnskktq wedprlqhva itgpavpysr dykrkyeffr
      481 rklkkqndip nkfemklrra tvledsyrrv mgvkradflk arlwiefdge kgldyggvar
      541 ewffliskem fnpyyglfey satdnytlqi npnsglcned hlsyfkfigr vagmavyhgk
      601 lldgffirpf ykmmlhkpit lhdmesvdse yynslrwile ndpteldlrf videelfgqt
      661 hqhelknggs eivvtnknkk eyiylviqwr fvnriqkqma afkegffeli pqdlikifde
      721 nelellmcgl gdvdvndwre htkykngysi nhqviqwfwk avlmmdsekr irllqfvtgt
      781 srvpmngfae lygsngpqsf tveqwgtpek lprahtcfnr ldlppyesfe elwdklqmai
      841 entqgfdgvd
//
LOCUS       XP_061013202            1461 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA-binding protein RFX7 [Dama dama].
ACCESSION   XP_061013202
VERSION     XP_061013202.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157219.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1461
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1461
                     /product="DNA-binding protein RFX7"
                     /calculated_mol_wt=157317
     Region          43..100
                     /region_name="RFX5_N"
                     /note="RFX5 N-terminal domain; pfam18326"
                     /db_xref="CDD:375753"
     Region          105..183
                     /region_name="RFX_DNA_binding"
                     /note="RFX DNA-binding domain; pfam02257"
                     /db_xref="CDD:460512"
     Region          <322..574
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     CDS             1..1461
                     /gene="RFX7"
                     /coded_by="XM_061157219.1:131..4516"
                     /db_xref="GeneID:133066293"
ORIGIN      
        1 maeeqqqppp qqpdahqqlp psapnsgval palvpglpgt easalqhrik nsicktiqsk
       61 vdcilqevek ftdleklyly lqlpsglsng eksdqnamss sraqqmhafs wirntleehp
      121 etslpkqevy deyksycdnl gyhplsaadf gkimknvfpn mkarrlgtrg kskycysglr
      181 kkafvhmptl pnldfhktgd glegtepsgq lqnideevis sacrlvcewa qkvlsqpfdt
      241 vlelarflvk shyigtksma altvmaaapp gikgitqpsa fiptaesnsf qpqvktlpsp
      301 idakqqlqrk iqkkqqeqkl qsplpgessa kksegaasng vtnlsngnpa ilspqpigiv
      361 vaavpspipv qrtrqlvtsp spmsssdgkv lplnvqvvtq hmqsvkqtpk tpqnvpaspg
      421 gdrsarhryp qilpkpasts altirspttv lftsspikta vvptshmssl nvvkmtaisl
      481 tpssssaplk hsasansatg tteeartipq ikngsvvslq spgsktsstg gpsavevkme
      541 petssdeppi qcqensdgtd mpkttpgals gqksntdgav qkpsnegvve ikatkvcdqr
      601 tkcknrcnei lpgsstgnnq ntvtlsvatq nftftstssp sngdsinkdp klctksprkr
      661 lssslqesqv ppikkpiveq lsavipegqk pgsikkdqkv phsgktessa agaqisskvs
      721 thvnshivss qpmdssalvt sdsaleqqat pssspdikvk legsvflldn dsksdgsfnp
      781 newqqvtkds efisagceqq qdisvmtipe hsdindleks vwelegmpqd tysqqlhgqi
      841 qesslnqiqa qssdqlplqs elkefepsvs qtnesyfpfd deltqdsive elvlmeqqms
      901 mnnshsygnc lgmtlqsqsv tpgapmssha ssthfyhpih sngtpihtpt ptptptptpt
      961 ptptptsemi agsqslsres pcsrlaqttp vdsalgssrh tpigtphsnc sssvppspve
     1021 crnpfaftpi sssmayhdas ivssspvkpm qrpmathpdk tklewmnngy sgvgnssvsg
     1081 hgilpsyqel vedrfrkpha favpgqsyqs qsrhhdghfg rltpvspvqh qgatvnhtnk
     1141 qegfavpapl dnkgtnssas snfrcrsvsp avhrqrnlsg stlypvsnip rsnvtpfgsp
     1201 itpevhvftn vhtdacanni aqrsqsvplt vmmqtafpna lqkqtnskki tnvllsklds
     1261 dnddavrglg mnnlpsnyta rmnltqilet stvfpsanpq nmidsstsiy efqapsyltk
     1321 snstdqisfs pgdnqaqsei geqqldfsst vkdllsgdsl qtsqqlvgqv asdltnpasd
     1381 fssdirlsse lsgsindlnt ldpnllfdpg rqqgqddept leelkndplf qqicsdsmss
     1441 mtssgfewie skdhptveml g
//
LOCUS       XP_061013203            1461 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA-binding protein RFX7 [Dama dama].
ACCESSION   XP_061013203
VERSION     XP_061013203.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157220.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1461
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1461
                     /product="DNA-binding protein RFX7"
                     /calculated_mol_wt=157317
     Region          43..100
                     /region_name="RFX5_N"
                     /note="RFX5 N-terminal domain; pfam18326"
                     /db_xref="CDD:375753"
     Region          105..183
                     /region_name="RFX_DNA_binding"
                     /note="RFX DNA-binding domain; pfam02257"
                     /db_xref="CDD:460512"
     Region          <322..574
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     CDS             1..1461
                     /gene="RFX7"
                     /coded_by="XM_061157220.1:120..4505"
                     /db_xref="GeneID:133066293"
ORIGIN      
        1 maeeqqqppp qqpdahqqlp psapnsgval palvpglpgt easalqhrik nsicktiqsk
       61 vdcilqevek ftdleklyly lqlpsglsng eksdqnamss sraqqmhafs wirntleehp
      121 etslpkqevy deyksycdnl gyhplsaadf gkimknvfpn mkarrlgtrg kskycysglr
      181 kkafvhmptl pnldfhktgd glegtepsgq lqnideevis sacrlvcewa qkvlsqpfdt
      241 vlelarflvk shyigtksma altvmaaapp gikgitqpsa fiptaesnsf qpqvktlpsp
      301 idakqqlqrk iqkkqqeqkl qsplpgessa kksegaasng vtnlsngnpa ilspqpigiv
      361 vaavpspipv qrtrqlvtsp spmsssdgkv lplnvqvvtq hmqsvkqtpk tpqnvpaspg
      421 gdrsarhryp qilpkpasts altirspttv lftsspikta vvptshmssl nvvkmtaisl
      481 tpssssaplk hsasansatg tteeartipq ikngsvvslq spgsktsstg gpsavevkme
      541 petssdeppi qcqensdgtd mpkttpgals gqksntdgav qkpsnegvve ikatkvcdqr
      601 tkcknrcnei lpgsstgnnq ntvtlsvatq nftftstssp sngdsinkdp klctksprkr
      661 lssslqesqv ppikkpiveq lsavipegqk pgsikkdqkv phsgktessa agaqisskvs
      721 thvnshivss qpmdssalvt sdsaleqqat pssspdikvk legsvflldn dsksdgsfnp
      781 newqqvtkds efisagceqq qdisvmtipe hsdindleks vwelegmpqd tysqqlhgqi
      841 qesslnqiqa qssdqlplqs elkefepsvs qtnesyfpfd deltqdsive elvlmeqqms
      901 mnnshsygnc lgmtlqsqsv tpgapmssha ssthfyhpih sngtpihtpt ptptptptpt
      961 ptptptsemi agsqslsres pcsrlaqttp vdsalgssrh tpigtphsnc sssvppspve
     1021 crnpfaftpi sssmayhdas ivssspvkpm qrpmathpdk tklewmnngy sgvgnssvsg
     1081 hgilpsyqel vedrfrkpha favpgqsyqs qsrhhdghfg rltpvspvqh qgatvnhtnk
     1141 qegfavpapl dnkgtnssas snfrcrsvsp avhrqrnlsg stlypvsnip rsnvtpfgsp
     1201 itpevhvftn vhtdacanni aqrsqsvplt vmmqtafpna lqkqtnskki tnvllsklds
     1261 dnddavrglg mnnlpsnyta rmnltqilet stvfpsanpq nmidsstsiy efqapsyltk
     1321 snstdqisfs pgdnqaqsei geqqldfsst vkdllsgdsl qtsqqlvgqv asdltnpasd
     1381 fssdirlsse lsgsindlnt ldpnllfdpg rqqgqddept leelkndplf qqicsdsmss
     1441 mtssgfewie skdhptveml g
//
LOCUS       XP_061013204            1461 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA-binding protein RFX7 [Dama dama].
ACCESSION   XP_061013204
VERSION     XP_061013204.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157221.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1461
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1461
                     /product="DNA-binding protein RFX7"
                     /calculated_mol_wt=157317
     Region          43..100
                     /region_name="RFX5_N"
                     /note="RFX5 N-terminal domain; pfam18326"
                     /db_xref="CDD:375753"
     Region          105..183
                     /region_name="RFX_DNA_binding"
                     /note="RFX DNA-binding domain; pfam02257"
                     /db_xref="CDD:460512"
     Region          <322..574
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     CDS             1..1461
                     /gene="RFX7"
                     /coded_by="XM_061157221.1:120..4505"
                     /db_xref="GeneID:133066293"
ORIGIN      
        1 maeeqqqppp qqpdahqqlp psapnsgval palvpglpgt easalqhrik nsicktiqsk
       61 vdcilqevek ftdleklyly lqlpsglsng eksdqnamss sraqqmhafs wirntleehp
      121 etslpkqevy deyksycdnl gyhplsaadf gkimknvfpn mkarrlgtrg kskycysglr
      181 kkafvhmptl pnldfhktgd glegtepsgq lqnideevis sacrlvcewa qkvlsqpfdt
      241 vlelarflvk shyigtksma altvmaaapp gikgitqpsa fiptaesnsf qpqvktlpsp
      301 idakqqlqrk iqkkqqeqkl qsplpgessa kksegaasng vtnlsngnpa ilspqpigiv
      361 vaavpspipv qrtrqlvtsp spmsssdgkv lplnvqvvtq hmqsvkqtpk tpqnvpaspg
      421 gdrsarhryp qilpkpasts altirspttv lftsspikta vvptshmssl nvvkmtaisl
      481 tpssssaplk hsasansatg tteeartipq ikngsvvslq spgsktsstg gpsavevkme
      541 petssdeppi qcqensdgtd mpkttpgals gqksntdgav qkpsnegvve ikatkvcdqr
      601 tkcknrcnei lpgsstgnnq ntvtlsvatq nftftstssp sngdsinkdp klctksprkr
      661 lssslqesqv ppikkpiveq lsavipegqk pgsikkdqkv phsgktessa agaqisskvs
      721 thvnshivss qpmdssalvt sdsaleqqat pssspdikvk legsvflldn dsksdgsfnp
      781 newqqvtkds efisagceqq qdisvmtipe hsdindleks vwelegmpqd tysqqlhgqi
      841 qesslnqiqa qssdqlplqs elkefepsvs qtnesyfpfd deltqdsive elvlmeqqms
      901 mnnshsygnc lgmtlqsqsv tpgapmssha ssthfyhpih sngtpihtpt ptptptptpt
      961 ptptptsemi agsqslsres pcsrlaqttp vdsalgssrh tpigtphsnc sssvppspve
     1021 crnpfaftpi sssmayhdas ivssspvkpm qrpmathpdk tklewmnngy sgvgnssvsg
     1081 hgilpsyqel vedrfrkpha favpgqsyqs qsrhhdghfg rltpvspvqh qgatvnhtnk
     1141 qegfavpapl dnkgtnssas snfrcrsvsp avhrqrnlsg stlypvsnip rsnvtpfgsp
     1201 itpevhvftn vhtdacanni aqrsqsvplt vmmqtafpna lqkqtnskki tnvllsklds
     1261 dnddavrglg mnnlpsnyta rmnltqilet stvfpsanpq nmidsstsiy efqapsyltk
     1321 snstdqisfs pgdnqaqsei geqqldfsst vkdllsgdsl qtsqqlvgqv asdltnpasd
     1381 fssdirlsse lsgsindlnt ldpnllfdpg rqqgqddept leelkndplf qqicsdsmss
     1441 mtssgfewie skdhptveml g
//
LOCUS       XP_061013205            1461 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA-binding protein RFX7 [Dama dama].
ACCESSION   XP_061013205
VERSION     XP_061013205.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157222.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1461
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1461
                     /product="DNA-binding protein RFX7"
                     /calculated_mol_wt=157317
     Region          43..100
                     /region_name="RFX5_N"
                     /note="RFX5 N-terminal domain; pfam18326"
                     /db_xref="CDD:375753"
     Region          105..183
                     /region_name="RFX_DNA_binding"
                     /note="RFX DNA-binding domain; pfam02257"
                     /db_xref="CDD:460512"
     Region          <322..574
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     CDS             1..1461
                     /gene="RFX7"
                     /coded_by="XM_061157222.1:105..4490"
                     /db_xref="GeneID:133066293"
ORIGIN      
        1 maeeqqqppp qqpdahqqlp psapnsgval palvpglpgt easalqhrik nsicktiqsk
       61 vdcilqevek ftdleklyly lqlpsglsng eksdqnamss sraqqmhafs wirntleehp
      121 etslpkqevy deyksycdnl gyhplsaadf gkimknvfpn mkarrlgtrg kskycysglr
      181 kkafvhmptl pnldfhktgd glegtepsgq lqnideevis sacrlvcewa qkvlsqpfdt
      241 vlelarflvk shyigtksma altvmaaapp gikgitqpsa fiptaesnsf qpqvktlpsp
      301 idakqqlqrk iqkkqqeqkl qsplpgessa kksegaasng vtnlsngnpa ilspqpigiv
      361 vaavpspipv qrtrqlvtsp spmsssdgkv lplnvqvvtq hmqsvkqtpk tpqnvpaspg
      421 gdrsarhryp qilpkpasts altirspttv lftsspikta vvptshmssl nvvkmtaisl
      481 tpssssaplk hsasansatg tteeartipq ikngsvvslq spgsktsstg gpsavevkme
      541 petssdeppi qcqensdgtd mpkttpgals gqksntdgav qkpsnegvve ikatkvcdqr
      601 tkcknrcnei lpgsstgnnq ntvtlsvatq nftftstssp sngdsinkdp klctksprkr
      661 lssslqesqv ppikkpiveq lsavipegqk pgsikkdqkv phsgktessa agaqisskvs
      721 thvnshivss qpmdssalvt sdsaleqqat pssspdikvk legsvflldn dsksdgsfnp
      781 newqqvtkds efisagceqq qdisvmtipe hsdindleks vwelegmpqd tysqqlhgqi
      841 qesslnqiqa qssdqlplqs elkefepsvs qtnesyfpfd deltqdsive elvlmeqqms
      901 mnnshsygnc lgmtlqsqsv tpgapmssha ssthfyhpih sngtpihtpt ptptptptpt
      961 ptptptsemi agsqslsres pcsrlaqttp vdsalgssrh tpigtphsnc sssvppspve
     1021 crnpfaftpi sssmayhdas ivssspvkpm qrpmathpdk tklewmnngy sgvgnssvsg
     1081 hgilpsyqel vedrfrkpha favpgqsyqs qsrhhdghfg rltpvspvqh qgatvnhtnk
     1141 qegfavpapl dnkgtnssas snfrcrsvsp avhrqrnlsg stlypvsnip rsnvtpfgsp
     1201 itpevhvftn vhtdacanni aqrsqsvplt vmmqtafpna lqkqtnskki tnvllsklds
     1261 dnddavrglg mnnlpsnyta rmnltqilet stvfpsanpq nmidsstsiy efqapsyltk
     1321 snstdqisfs pgdnqaqsei geqqldfsst vkdllsgdsl qtsqqlvgqv asdltnpasd
     1381 fssdirlsse lsgsindlnt ldpnllfdpg rqqgqddept leelkndplf qqicsdsmss
     1441 mtssgfewie skdhptveml g
//
LOCUS       XP_061013206             494 aa            linear   MAM 02-DEC-2023
DEFINITION  meiosis-specific nuclear structural protein 1 isoform X1 [Dama
            dama].
ACCESSION   XP_061013206
VERSION     XP_061013206.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157223.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..494
                     /product="meiosis-specific nuclear structural protein 1
                     isoform X1"
                     /calculated_mol_wt=60414
     Region          49..>131
                     /region_name="PRK05431"
                     /note="seryl-tRNA synthetase; Provisional"
                     /db_xref="CDD:235461"
     Region          114..454
                     /region_name="TPH"
                     /note="Trichohyalin-plectin-homology domain; pfam13868"
                     /db_xref="CDD:464007"
     CDS             1..494
                     /gene="MNS1"
                     /coded_by="XM_061157223.1:110..1594"
                     /db_xref="GeneID:133066294"
ORIGIN      
        1 mvskrralnf serhqnlvdi nyckklqvea lqrlqnqtrd rmvqsenddr aerkrflrll
       61 qdeqfeldme eaiqkaeenk rlrelqleqe eklatelakl kreslkdekl rqqvrensae
      121 lrelekklka aymnkeraaq iaekdaikye qmkrdaeiar tmmeehersi keenaaedkr
      181 nrvkaqynhd lekqleeqek kkqeayeqll keklmideiv rkiyeedqle rqqrlekmnt
      241 trryieefqk eqalwrkkkr eemeeenrki iefaklqqqr eedrmakvre segkrlqlqn
      301 mltqrleeml rqredleqvr qelyqeeqae ihkkkleeea eeklrkqkel kqdfmdqmal
      361 kelilqaake eeetfrkaml akfaeddrie lmnaqkqrmk qlehkravek lieerrnqfl
      421 adkqrelqew qwqqrrqgci naiveeerlk llkehatkll gylpkgvfkn eddidmlgee
      481 frkayqkrse icek
//
LOCUS       XP_061013207             468 aa            linear   MAM 02-DEC-2023
DEFINITION  meiosis-specific nuclear structural protein 1 isoform X2 [Dama
            dama].
ACCESSION   XP_061013207
VERSION     XP_061013207.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157224.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..468
                     /product="meiosis-specific nuclear structural protein 1
                     isoform X2"
                     /calculated_mol_wt=57271
     Region          23..>105
                     /region_name="PRK05431"
                     /note="seryl-tRNA synthetase; Provisional"
                     /db_xref="CDD:235461"
     Region          88..428
                     /region_name="TPH"
                     /note="Trichohyalin-plectin-homology domain; pfam13868"
                     /db_xref="CDD:464007"
     CDS             1..468
                     /gene="MNS1"
                     /coded_by="XM_061157224.1:126..1532"
                     /db_xref="GeneID:133066294"
ORIGIN      
        1 mvealqrlqn qtrdrmvqse nddraerkrf lrllqdeqfe ldmeeaiqka eenkrlrelq
       61 leqeeklate laklkreslk deklrqqvre nsaelrelek klkaaymnke raaqiaekda
      121 ikyeqmkrda eiartmmeeh ersikeenaa edkrnrvkaq ynhdlekqle eqekkkqeay
      181 eqllkeklmi deivrkiyee dqlerqqrle kmnttrryie efqkeqalwr kkkreemeee
      241 nrkiiefakl qqqreedrma kvresegkrl qlqnmltqrl eemlrqredl eqvrqelyqe
      301 eqaeihkkkl eeeaeeklrk qkelkqdfmd qmalkelilq aakeeeetfr kamlakfaed
      361 drielmnaqk qrmkqlehkr aveklieerr nqfladkqre lqewqwqqrr qgcinaivee
      421 erlkllkeha tkllgylpkg vfkneddidm lgeefrkayq krseicek
//
LOCUS       XP_061013208             388 aa            linear   MAM 02-DEC-2023
DEFINITION  testis-expressed protein 9 isoform X1 [Dama dama].
ACCESSION   XP_061013208
VERSION     XP_061013208.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157225.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..388
                     /product="testis-expressed protein 9 isoform X1"
                     /calculated_mol_wt=44523
     Region          <188..>346
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..388
                     /gene="TEX9"
                     /coded_by="XM_061157225.1:17..1183"
                     /db_xref="GeneID:133066295"
ORIGIN      
        1 magrsfkrpg vsgtplppri qqpamtgrdl lakeeeykrl naeleaktad lvrqaeevir
       61 dqqevrsksv saqiksyedk ddysfsrpls egtvhlhset kpktknvdpi nkvqnklysa
      121 skgrksnssv klkychvqta ddvaipedfs dfslaktisk iegqleeegl pdyinddifs
      181 gvsedigtea qirflkaklh vmqeeldnvv cecnkkedei qdlksqlkkf eedcvrqqrt
      241 inlqqsqtek fktlfeeank kcdglqqqls sverelenkr rlqkqavasq samevrlnra
      301 leeaekykle lsklrqnnkd ianeehrkie alksenkkle kqkgelmigf kkqlklidvl
      361 krqkmhieaa kmlsfteeef mkalewgn
//
LOCUS       XP_061013209             364 aa            linear   MAM 02-DEC-2023
DEFINITION  testis-expressed protein 9 isoform X2 [Dama dama].
ACCESSION   XP_061013209
VERSION     XP_061013209.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157226.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..364
                     /product="testis-expressed protein 9 isoform X2"
                     /calculated_mol_wt=41992
     Region          <164..>322
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..364
                     /gene="TEX9"
                     /coded_by="XM_061157226.1:454..1548"
                     /db_xref="GeneID:133066295"
ORIGIN      
        1 mtgrdllake eeykrlnael eaktadlvrq aeevirdqqe vrsksvsaqi ksyedkddys
       61 fsrplsegtv hlhsetkpkt knvdpinkvq nklysaskgr ksnssvklky chvqtaddva
      121 ipedfsdfsl aktiskiegq leeeglpdyi nddifsgvse digteaqirf lkaklhvmqe
      181 eldnvvcecn kkedeiqdlk sqlkkfeedc vrqqrtinlq qsqtekfktl feeankkcdg
      241 lqqqlssver elenkrrlqk qavasqsame vrlnraleea ekyklelskl rqnnkdiane
      301 ehrkiealks enkklekqkg elmigfkkql klidvlkrqk mhieaakmls fteeefmkal
      361 ewgn
//
LOCUS       XP_061013210             343 aa            linear   MAM 02-DEC-2023
DEFINITION  testis-expressed protein 9 isoform X3 [Dama dama].
ACCESSION   XP_061013210
VERSION     XP_061013210.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157227.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..343
                     /product="testis-expressed protein 9 isoform X3"
                     /calculated_mol_wt=39199
     Region          <203..>322
                     /region_name="ClyA-like"
                     /note="family of the cytolysin A (ClyA) family alpha
                     pore-forming toxins (alpha-PFT) including Bacillus cereus
                     HblB, Aeromonas hydrophila AhlB, Bacillus thuringiensis
                     Cry6Aa and similar proteins; cl45899"
                     /db_xref="CDD:459244"
     CDS             1..343
                     /gene="TEX9"
                     /coded_by="XM_061157227.1:17..1048"
                     /db_xref="GeneID:133066295"
ORIGIN      
        1 magrsfkrpg vsgtplppri qqpamtgrdl lakeeeykrl naeleaktad lvrqaeevir
       61 dqqevrsksv saqiksyedk ddysfsrpls egtvhlhset kpktknvdpi nkvqnklysa
      121 skgrksnssv klkychvqta ddvaipedfs dfslaktisk iegqleeegl pdyinddifs
      181 gvsedigtea qirflkaklh vmqeeldnvv cecnkkedei qdlksqlkkf eedcvrqqrt
      241 inlqqsqtek fktlfeeank kcdglqqqls sverdianee hrkiealkse nkklekqkge
      301 lmigfkkqlk lidvlkrqkm hieaakmlsf teeefmkale wgn
//
LOCUS       XP_061013211             966 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 280D isoform X1 [Dama dama].
ACCESSION   XP_061013211
VERSION     XP_061013211.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157228.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..966
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..966
                     /product="zinc finger protein 280D isoform X1"
                     /calculated_mol_wt=107830
     Region          32..216
                     /region_name="DUF4195"
                     /note="Domain of unknown function (DUF4195); pfam13836"
                     /db_xref="CDD:463993"
     Region          347..368
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(352,354,356,358..359,362..363,367,382,384,388..389,
                     392..393,396,412,414,416,418..419,422..423,426)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          377..398
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(377,380,393,398)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          407..426
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..966
                     /gene="ZNF280D"
                     /coded_by="XM_061157228.1:312..3212"
                     /db_xref="GeneID:133066297"
ORIGIN      
        1 maelfmecee eelepwqkkv kevdddddde pifvgeisss kpaisnilnr vnpssysrgi
       61 kngalcrgit pafkptsqhy tnptsnpvaa spvnfhpesr ssdssvivqp lskpgyvmns
      121 srvvsnnsse llfdltqdsg lphyqggpav sitgmnessf lskrpstsev nsvnpkkskp
      181 segvcgtnss avfssaksls vtspqavpsk gtntssnqsk ngtpfpracp kcnihfnlld
      241 plknhmkycc pdminnvlgl akteisstan knktvdsekg klimlvndfy ygkhegdvqe
      301 eqktyttfkc fsclkilknn irfmnhmkhh lelekqsses wenhttcqhc yrqfptpfql
      361 qchiesthtp hefstickic elsfetehil lqhmkdnhkp gempyicqvc nyrsssfsdv
      421 ethfrtshen tknllcpfcl kvikiatpym hhymkhqkkg ihrctkcrlq fltckekmdh
      481 ktqhhrtfik pkqleglppg tkvtirasvg plqsgsstmp sisaststlq lspprtknit
      541 aksptksnts kpnitksias kpnaskpngn kpkykskian lqkkqstlas snkkskvnta
      601 lrnlryrrgv hkciecysei kdfanhfpty vhcsfcrynt scsksyvnhm msfhsnrpsk
      661 rfcifkkyse dlrgitlvcl ncdfltdvsg ldnmathlsq hethtcqvvi ekvsvcipts
      721 ehlselknea ptkeqepmse eiarsnlaea etetsnsesk qdeasseeik ngcdvhlleg
      781 ssttkseedr svsdkendnc ledqetgskd ifgydsaida dkvekekqie hicqetelkm
      841 cqssenlisc dqiedrnage arfssknikd lrltsgdvsi dqflrkrdeh esvssdvseq
      901 gsvhlepltp sevlefeate ilqkgsgdps aktdavvsdq tdnvpgensl sttettgdlv
      961 dekers
//
LOCUS       XP_061013212             966 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 280D isoform X1 [Dama dama].
ACCESSION   XP_061013212
VERSION     XP_061013212.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157229.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..966
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..966
                     /product="zinc finger protein 280D isoform X1"
                     /calculated_mol_wt=107830
     Region          32..216
                     /region_name="DUF4195"
                     /note="Domain of unknown function (DUF4195); pfam13836"
                     /db_xref="CDD:463993"
     Region          347..368
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(352,354,356,358..359,362..363,367,382,384,388..389,
                     392..393,396,412,414,416,418..419,422..423,426)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          377..398
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(377,380,393,398)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          407..426
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..966
                     /gene="ZNF280D"
                     /coded_by="XM_061157229.1:165..3065"
                     /db_xref="GeneID:133066297"
ORIGIN      
        1 maelfmecee eelepwqkkv kevdddddde pifvgeisss kpaisnilnr vnpssysrgi
       61 kngalcrgit pafkptsqhy tnptsnpvaa spvnfhpesr ssdssvivqp lskpgyvmns
      121 srvvsnnsse llfdltqdsg lphyqggpav sitgmnessf lskrpstsev nsvnpkkskp
      181 segvcgtnss avfssaksls vtspqavpsk gtntssnqsk ngtpfpracp kcnihfnlld
      241 plknhmkycc pdminnvlgl akteisstan knktvdsekg klimlvndfy ygkhegdvqe
      301 eqktyttfkc fsclkilknn irfmnhmkhh lelekqsses wenhttcqhc yrqfptpfql
      361 qchiesthtp hefstickic elsfetehil lqhmkdnhkp gempyicqvc nyrsssfsdv
      421 ethfrtshen tknllcpfcl kvikiatpym hhymkhqkkg ihrctkcrlq fltckekmdh
      481 ktqhhrtfik pkqleglppg tkvtirasvg plqsgsstmp sisaststlq lspprtknit
      541 aksptksnts kpnitksias kpnaskpngn kpkykskian lqkkqstlas snkkskvnta
      601 lrnlryrrgv hkciecysei kdfanhfpty vhcsfcrynt scsksyvnhm msfhsnrpsk
      661 rfcifkkyse dlrgitlvcl ncdfltdvsg ldnmathlsq hethtcqvvi ekvsvcipts
      721 ehlselknea ptkeqepmse eiarsnlaea etetsnsesk qdeasseeik ngcdvhlleg
      781 ssttkseedr svsdkendnc ledqetgskd ifgydsaida dkvekekqie hicqetelkm
      841 cqssenlisc dqiedrnage arfssknikd lrltsgdvsi dqflrkrdeh esvssdvseq
      901 gsvhlepltp sevlefeate ilqkgsgdps aktdavvsdq tdnvpgensl sttettgdlv
      961 dekers
//
LOCUS       XP_061013214             795 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 280D isoform X2 [Dama dama].
ACCESSION   XP_061013214
VERSION     XP_061013214.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157231.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..795
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..795
                     /product="zinc finger protein 280D isoform X2"
                     /calculated_mol_wt=88840
     Region          32..216
                     /region_name="DUF4195"
                     /note="Domain of unknown function (DUF4195); pfam13836"
                     /db_xref="CDD:463993"
     Region          347..368
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(352,354,356,358..359,362..363,367,382,384,388..389,
                     392..393,396,412,414,416,418..419,422..423,426)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          377..398
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(377,380,393,398)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          407..426
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..795
                     /gene="ZNF280D"
                     /coded_by="XM_061157231.1:311..2698"
                     /db_xref="GeneID:133066297"
ORIGIN      
        1 maelfmecee eelepwqkkv kevdddddde pifvgeisss kpaisnilnr vnpssysrgi
       61 kngalcrgit pafkptsqhy tnptsnpvaa spvnfhpesr ssdssvivqp lskpgyvmns
      121 srvvsnnsse llfdltqdsg lphyqggpav sitgmnessf lskrpstsev nsvnpkkskp
      181 segvcgtnss avfssaksls vtspqavpsk gtntssnqsk ngtpfpracp kcnihfnlld
      241 plknhmkycc pdminnvlgl akteisstan knktvdsekg klimlvndfy ygkhegdvqe
      301 eqktyttfkc fsclkilknn irfmnhmkhh lelekqsses wenhttcqhc yrqfptpfql
      361 qchiesthtp hefstickic elsfetehil lqhmkdnhkp gempyicqvc nyrsssfsdv
      421 ethfrtshen tknllcpfcl kvikiatpym hhymkhqkkg ihrctkcrlq fltckekmdh
      481 ktqhhrtfik pkqleglppg tkvtirasvg plqsgsstmp sisaststlq lspprtknit
      541 aksptksnts kpnitksias kpnaskpngn kpkykskian lqkkqstlas snkkskvnta
      601 lrnlryrrgv hkciecysei kdfanhfpty vhcsfcrynt scsksyvnhm msfhsnrpsk
      661 rfcifkkyse dlrgitlvcl ncdfltdvsg ldnmathlsq hethtcqvvi ekvsvcipts
      721 ehlsewrssp eisknvqgtp gqcppsmntt dacslfprnv tnltvgpalg cglrksdlgk
      781 tpflhgwpsi rlmli
//
LOCUS       XP_061013215             706 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor 12 isoform X1 [Dama dama].
ACCESSION   XP_061013215
VERSION     XP_061013215.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157232.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..706
                     /product="transcription factor 12 isoform X1"
                     /calculated_mol_wt=75711
     Region          595..679
                     /region_name="bHLH_E-protein_TCF4_E2-2"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor 4 (TCF-4) and similar proteins;
                     cd18945"
                     /db_xref="CDD:381515"
     Site            order(603,607,609..611,613,618,639..640)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381515"
     Site            order(616..617,620..621,623..624,627,631,641,644,648,651,
                     654..659)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381515"
     CDS             1..706
                     /gene="TCF12"
                     /coded_by="XM_061157232.1:349..2469"
                     /db_xref="GeneID:133066298"
ORIGIN      
        1 mnpqqqrmaa igtdkelsdl ldfsamfspp vnsgktrptt lgssqfsgsg mderggttsw
       61 gtsgqpspsy dssrgftdsp hysdhlndsr lgaheglspt pfmnsnlmgk tsergsfsly
      121 srdtglpgcq ssllrqdlgl gspaqlsssg kpgtpyysfs atssrrrplh dsaaldplqa
      181 kkvrkvppgl pssvyapspn sddfnresps ypspkpptsm fastffmqdg thnssdlwss
      241 sngmsqpgfg gilgtstshm sqsssygslh shdrlsypph svsptdints lppmssfhra
      301 stssspyvaa shtppingsd silgtrgnaa gssqtgdalg kalasiyspd htsssfpsnp
      361 stpvgspspl tgtsqwprpg gqapsspsye nslhslknrv eqqlhehlqd amsflkdvce
      421 qsrmedrldr lddaihvlrn havgpstslp aghsdihsll gpshnapigs lnsnyggssl
      481 vtssrsasmv gthredsvsl ngnhsvlsst vtasstdlnh ktqenyrggl qsqsgtvvpt
      541 eiktenkekd enlheppssd dmksddessq kdikvssrgr tsstnededl npeqkierek
      601 errmannare rlrvrdinea fkelgrmcql hlksekpqtk llilhqavav ilsleqqvre
      661 rnlnpkaacl krreeekvsa vsaeppatlp gthpglsett npmghm
//
LOCUS       XP_061013216             705 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor 12 isoform X2 [Dama dama].
ACCESSION   XP_061013216
VERSION     XP_061013216.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157233.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..705
                     /product="transcription factor 12 isoform X2"
                     /calculated_mol_wt=75583
     Region          594..678
                     /region_name="bHLH_E-protein_TCF4_E2-2"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor 4 (TCF-4) and similar proteins;
                     cd18945"
                     /db_xref="CDD:381515"
     Site            order(602,606,608..610,612,617,638..639)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381515"
     Site            order(615..616,619..620,622..623,626,630,640,643,647,650,
                     653..658)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381515"
     CDS             1..705
                     /gene="TCF12"
                     /coded_by="XM_061157233.1:349..2466"
                     /db_xref="GeneID:133066298"
ORIGIN      
        1 mnpqqqrmaa igtdkelsdl ldfsamfspp vnsgktrptt lgssqfsgsg mderggttsw
       61 gtsgqpspsy dssrgftdsp hysdhlndsr lgaheglspt pfmnsnlmgk tsergsfsly
      121 srdtglpgcq ssllrqdlgl gspaqlsssg kpgtpyysfs atssrrrplh dsaaldplqa
      181 kkvrkvppgl pssvyapspn sddfnresps ypspkpptsm fastffmqdg thnssdlwss
      241 sngmsqpgfg gilgtstshm sqsssygslh shdrlsypph svsptdints lppmssfhra
      301 stssspyvaa shtppingsd silgtrgnaa gssqtgdalg kalasiyspd htsssfpsnp
      361 stpvgspspl tgtsqwprpg gqapsspsye nslhslknrv eqqlhehlqd amsflkdvce
      421 srmedrldrl ddaihvlrnh avgpstslpa ghsdihsllg pshnapigsl nsnyggsslv
      481 tssrsasmvg thredsvsln gnhsvlsstv tasstdlnhk tqenyrgglq sqsgtvvpte
      541 iktenkekde nlheppssdd mksddessqk dikvssrgrt sstnededln peqkiereke
      601 rrmannarer lrvrdineaf kelgrmcqlh lksekpqtkl lilhqavavi lsleqqvrer
      661 nlnpkaaclk rreeekvsav saeppatlpg thpglsettn pmghm
//
LOCUS       XP_061013217             705 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor 12 isoform X3 [Dama dama].
ACCESSION   XP_061013217
VERSION     XP_061013217.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157234.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..705
                     /product="transcription factor 12 isoform X3"
                     /calculated_mol_wt=75624
     Region          594..678
                     /region_name="bHLH_E-protein_TCF4_E2-2"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor 4 (TCF-4) and similar proteins;
                     cd18945"
                     /db_xref="CDD:381515"
     Site            order(602,606,608..610,612,617,638..639)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381515"
     Site            order(615..616,619..620,622..623,626,630,640,643,647,650,
                     653..658)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381515"
     CDS             1..705
                     /gene="TCF12"
                     /coded_by="XM_061157234.1:351..2468"
                     /db_xref="GeneID:133066298"
ORIGIN      
        1 mnpqqqrmaa igtdkelsdl ldfsamfspp vnsgktrptt lgssqfsgsg mderggttsw
       61 gtsgqpspsy dssrgftdsp hysdhlndsr lgaheglspt pfmnsnlmgk tsergsfsly
      121 srdtglpgcq ssllrqdlgl gspaqlsssg kpgtpyysfs atssrrrplh dsaaldplqa
      181 kkvrkvppgl pssvyapspn sddfnresps ypspkpptsm fastffmqdg thnssdlwss
      241 sngmsqpgfg gilgtstshm sqsssygslh shdrlsypph svsptdints lppmssfhra
      301 stssspyvaa shtppingsd silgtrgnaa gssqtgdalg kalasiyspd htsssfpsnp
      361 stpvgspspl tgtsqwprpg gqapsspsye nslhslknrv eqqlhehlqd amsflkdvce
      421 qsrmedrldr lddaihvlrn havgpstslp aghsdihsll gpshnapigs lnsnyggssl
      481 vtssrsasmv gthredsvsl ngnhsvlsst vtasstdlnh ktqenyrggl qsqsgtvvpt
      541 eiktenkekd enlheppssd dmksddessq kdikvssrgr tstnededln peqkiereke
      601 rrmannarer lrvrdineaf kelgrmcqlh lksekpqtkl lilhqavavi lsleqqvrer
      661 nlnpkaaclk rreeekvsav saeppatlpg thpglsettn pmghm
//
LOCUS       XP_061013218             682 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor 12 isoform X4 [Dama dama].
ACCESSION   XP_061013218
VERSION     XP_061013218.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157235.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..682
                     /product="transcription factor 12 isoform X4"
                     /calculated_mol_wt=72831
     Region          571..655
                     /region_name="bHLH_E-protein_TCF4_E2-2"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor 4 (TCF-4) and similar proteins;
                     cd18945"
                     /db_xref="CDD:381515"
     Site            order(579,583,585..587,589,594,615..616)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381515"
     Site            order(592..593,596..597,599..600,603,607,617,620,624,627,
                     630..635)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381515"
     CDS             1..682
                     /gene="TCF12"
                     /coded_by="XM_061157235.1:348..2396"
                     /db_xref="GeneID:133066298"
ORIGIN      
        1 mnpqqqrmaa igtdkelsdl ldfsamfspp vnsgktrptt lgssqfsgsg mderggttsw
       61 gtsgqpspsy dssrgftdsp hysdhlndsr lgaheglspt pfmnsnlmgk tsergsfsly
      121 srdtglpgcq ssllrqdlgl gspaqlsssg kpgtpyysfs atssrrrplh dsaaldplqa
      181 kkvrkvppgl pssvyapspn sddfnresps ypspkpptsm fastffmqdg thnssdlwss
      241 sngmsqpgfg gilgtstshm sqsssygslh shdrlsypph svsptdints lppmssfhra
      301 stssspyvaa shtppingsd silgtrgnaa gssqtgdalg kalasiyspd htsssfpsnp
      361 stpvgspspl tgtsqwprpg gqapsspsye nslhslqsrm edrldrldda ihvlrnhavg
      421 pstslpaghs dihsllgpsh napigslnsn yggsslvtss rsasmvgthr edsvslngnh
      481 svlsstvtas stdlnhktqe nyrgglqsqs gtvvpteikt enkekdenlh eppssddmks
      541 ddessqkdik vssrgrtsst nededlnpeq kierekerrm annarerlrv rdineafkel
      601 grmcqlhlks ekpqtkllil hqavavilsl eqqvrernln pkaaclkrre eekvsavsae
      661 ppatlpgthp glsettnpmg hm
//
LOCUS       XP_061013219             681 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor 12 isoform X5 [Dama dama].
ACCESSION   XP_061013219
VERSION     XP_061013219.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157236.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..681
                     /product="transcription factor 12 isoform X5"
                     /calculated_mol_wt=72703
     Region          570..654
                     /region_name="bHLH_E-protein_TCF4_E2-2"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor 4 (TCF-4) and similar proteins;
                     cd18945"
                     /db_xref="CDD:381515"
     Site            order(578,582,584..586,588,593,614..615)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381515"
     Site            order(591..592,595..596,598..599,602,606,616,619,623,626,
                     629..634)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381515"
     CDS             1..681
                     /gene="TCF12"
                     /coded_by="XM_061157236.1:348..2393"
                     /db_xref="GeneID:133066298"
ORIGIN      
        1 mnpqqqrmaa igtdkelsdl ldfsamfspp vnsgktrptt lgssqfsgsg mderggttsw
       61 gtsgqpspsy dssrgftdsp hysdhlndsr lgaheglspt pfmnsnlmgk tsergsfsly
      121 srdtglpgcq ssllrqdlgl gspaqlsssg kpgtpyysfs atssrrrplh dsaaldplqa
      181 kkvrkvppgl pssvyapspn sddfnresps ypspkpptsm fastffmqdg thnssdlwss
      241 sngmsqpgfg gilgtstshm sqsssygslh shdrlsypph svsptdints lppmssfhra
      301 stssspyvaa shtppingsd silgtrgnaa gssqtgdalg kalasiyspd htsssfpsnp
      361 stpvgspspl tgtsqwprpg gqapsspsye nslhslsrme drldrlddai hvlrnhavgp
      421 stslpaghsd ihsllgpshn apigslnsny ggsslvtssr sasmvgthre dsvslngnhs
      481 vlsstvtass tdlnhktqen yrgglqsqsg tvvpteikte nkekdenlhe ppssddmksd
      541 dessqkdikv ssrgrtsstn ededlnpeqk ierekerrma nnarerlrvr dineafkelg
      601 rmcqlhlkse kpqtkllilh qavavilsle qqvrernlnp kaaclkrree ekvsavsaep
      661 patlpgthpg lsettnpmgh m
//
LOCUS       XP_061013220             648 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor 12 isoform X6 [Dama dama].
ACCESSION   XP_061013220
VERSION     XP_061013220.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157237.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..648
                     /product="transcription factor 12 isoform X6"
                     /calculated_mol_wt=69808
     Region          537..621
                     /region_name="bHLH_E-protein_TCF4_E2-2"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor 4 (TCF-4) and similar proteins;
                     cd18945"
                     /db_xref="CDD:381515"
     Site            order(545,549,551..553,555,560,581..582)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381515"
     Site            order(558..559,562..563,565..566,569,573,583,586,590,593,
                     596..601)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381515"
     CDS             1..648
                     /gene="TCF12"
                     /coded_by="XM_061157237.1:153..2099"
                     /db_xref="GeneID:133066298"
ORIGIN      
        1 mkqlnskarq egqrikgftd sphysdhlnd srlgahegls ptpfmnsnlm gktsergsfs
       61 lysrdtglpg cqssllrqdl glgspaqlss sgkpgtpyys fsatssrrrp lhdsaaldpl
      121 qakkvrkvpp glpssvyaps pnsddfnres psypspkppt smfastffmq dgthnssdlw
      181 sssngmsqpg fggilgtsts hmsqsssygs lhshdrlsyp phsvsptdin tslppmssfh
      241 rastssspyv aashtpping sdsilgtrgn aagssqtgda lgkalasiys pdhtsssfps
      301 npstpvgsps pltgtsqwpr pggqapssps yenslhslkn rveqqlhehl qdamsflkdv
      361 ceqsrmedrl drlddaihvl rnhavgpsts lpaghsdihs llgpshnapi gslnsnyggs
      421 slvtssrsas mvgthredsv slngnhsvls stvtasstdl nhktqenyrg glqsqsgtvv
      481 pteiktenke kdenlhepps sddmksddes sqkdikvssr grtsstnede dlnpeqkier
      541 ekerrmanna rerlrvrdin eafkelgrmc qlhlksekpq tkllilhqav avilsleqqv
      601 rernlnpkaa clkrreeekv savsaeppat lpgthpglse ttnpmghm
//
LOCUS       XP_061013221             536 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor 12 isoform X7 [Dama dama].
ACCESSION   XP_061013221
VERSION     XP_061013221.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157238.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..536
                     /product="transcription factor 12 isoform X7"
                     /calculated_mol_wt=57818
     Region          425..509
                     /region_name="bHLH_E-protein_TCF4_E2-2"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor 4 (TCF-4) and similar proteins;
                     cd18945"
                     /db_xref="CDD:381515"
     Site            order(433,437,439..441,443,448,469..470)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381515"
     Site            order(446..447,450..451,453..454,457,461,471,474,478,481,
                     484..489)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381515"
     CDS             1..536
                     /gene="TCF12"
                     /coded_by="XM_061157238.1:85..1695"
                     /db_xref="GeneID:133066298"
ORIGIN      
        1 mycaypvpgm gssslmyyyn gktvyapspn sddfnresps ypspkpptsm fastffmqdg
       61 thnssdlwss sngmsqpgfg gilgtstshm sqsssygslh shdrlsypph svsptdints
      121 lppmssfhra stssspyvaa shtppingsd silgtrgnaa gssqtgdalg kalasiyspd
      181 htsssfpsnp stpvgspspl tgtsqwprpg gqapsspsye nslhslknrv eqqlhehlqd
      241 amsflkdvce qsrmedrldr lddaihvlrn havgpstslp aghsdihsll gpshnapigs
      301 lnsnyggssl vtssrsasmv gthredsvsl ngnhsvlsst vtasstdlnh ktqenyrggl
      361 qsqsgtvvpt eiktenkekd enlheppssd dmksddessq kdikvssrgr tsstnededl
      421 npeqkierek errmannare rlrvrdinea fkelgrmcql hlksekpqtk llilhqavav
      481 ilsleqqvre rnlnpkaacl krreeekvsa vsaeppatlp gthpglsett npmghm
//
LOCUS       XP_061013222             512 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor 12 isoform X8 [Dama dama].
ACCESSION   XP_061013222
VERSION     XP_061013222.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157239.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..512
                     /product="transcription factor 12 isoform X8"
                     /calculated_mol_wt=54937
     Region          401..485
                     /region_name="bHLH_E-protein_TCF4_E2-2"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor 4 (TCF-4) and similar proteins;
                     cd18945"
                     /db_xref="CDD:381515"
     Site            order(409,413,415..417,419,424,445..446)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381515"
     Site            order(422..423,426..427,429..430,433,437,447,450,454,457,
                     460..465)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381515"
     CDS             1..512
                     /gene="TCF12"
                     /coded_by="XM_061157239.1:83..1621"
                     /db_xref="GeneID:133066298"
ORIGIN      
        1 mycaypvpgm gssslmyyyn gktvyapspn sddfnresps ypspkpptsm fastffmqdg
       61 thnssdlwss sngmsqpgfg gilgtstshm sqsssygslh shdrlsypph svsptdints
      121 lppmssfhra stssspyvaa shtppingsd silgtrgnaa gssqtgdalg kalasiyspd
      181 htsssfpsnp stpvgspspl tgtsqwprpg gqapsspsye nslhslqsrm edrldrldda
      241 ihvlrnhavg pstslpaghs dihsllgpsh napigslnsn yggsslvtss rsasmvgthr
      301 edsvslngnh svlsstvtas stdlnhktqe nyrgglqsqs gtvvpteikt enkekdenlh
      361 eppssddmks ddessqkdik vssrgrtsst nededlnpeq kierekerrm annarerlrv
      421 rdineafkel grmcqlhlks ekpqtkllil hqavavilsl eqqvrernln pkaaclkrre
      481 eekvsavsae ppatlpgthp glsettnpmg hm
//
LOCUS       XP_061013223             681 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor 12 isoform X9 [Dama dama].
ACCESSION   XP_061013223
VERSION     XP_061013223.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157240.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..681
                     /product="transcription factor 12 isoform X9"
                     /calculated_mol_wt=72744
     Region          570..654
                     /region_name="bHLH_E-protein_TCF4_E2-2"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor 4 (TCF-4) and similar proteins;
                     cd18945"
                     /db_xref="CDD:381515"
     Site            order(578,582,584..586,588,593,614..615)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381515"
     Site            order(591..592,595..596,598..599,602,606,616,619,623,626,
                     629..634)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381515"
     CDS             1..681
                     /gene="TCF12"
                     /coded_by="XM_061157240.1:350..2395"
                     /db_xref="GeneID:133066298"
ORIGIN      
        1 mnpqqqrmaa igtdkelsdl ldfsamfspp vnsgktrptt lgssqfsgsg mderggttsw
       61 gtsgqpspsy dssrgftdsp hysdhlndsr lgaheglspt pfmnsnlmgk tsergsfsly
      121 srdtglpgcq ssllrqdlgl gspaqlsssg kpgtpyysfs atssrrrplh dsaaldplqa
      181 kkvrkvppgl pssvyapspn sddfnresps ypspkpptsm fastffmqdg thnssdlwss
      241 sngmsqpgfg gilgtstshm sqsssygslh shdrlsypph svsptdints lppmssfhra
      301 stssspyvaa shtppingsd silgtrgnaa gssqtgdalg kalasiyspd htsssfpsnp
      361 stpvgspspl tgtsqwprpg gqapsspsye nslhslqsrm edrldrldda ihvlrnhavg
      421 pstslpaghs dihsllgpsh napigslnsn yggsslvtss rsasmvgthr edsvslngnh
      481 svlsstvtas stdlnhktqe nyrgglqsqs gtvvpteikt enkekdenlh eppssddmks
      541 ddessqkdik vssrgrtstn ededlnpeqk ierekerrma nnarerlrvr dineafkelg
      601 rmcqlhlkse kpqtkllilh qavavilsle qqvrernlnp kaaclkrree ekvsavsaep
      661 patlpgthpg lsettnpmgh m
//
LOCUS       XP_061013224             511 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor 12 isoform X10 [Dama dama].
ACCESSION   XP_061013224
VERSION     XP_061013224.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157241.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..511
                     /product="transcription factor 12 isoform X10"
                     /calculated_mol_wt=54850
     Region          400..484
                     /region_name="bHLH_E-protein_TCF4_E2-2"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor 4 (TCF-4) and similar proteins;
                     cd18945"
                     /db_xref="CDD:381515"
     Site            order(408,412,414..416,418,423,444..445)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381515"
     Site            order(421..422,425..426,428..429,432,436,446,449,453,456,
                     459..464)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381515"
     CDS             1..511
                     /gene="TCF12"
                     /coded_by="XM_061157241.1:86..1621"
                     /db_xref="GeneID:133066298"
ORIGIN      
        1 mycaypvpgm gssslmyyyn gktvyapspn sddfnresps ypspkpptsm fastffmqdg
       61 thnssdlwss sngmsqpgfg gilgtstshm sqsssygslh shdrlsypph svsptdints
      121 lppmssfhra stssspyvaa shtppingsd silgtrgnaa gssqtgdalg kalasiyspd
      181 htsssfpsnp stpvgspspl tgtsqwprpg gqapsspsye nslhslqsrm edrldrldda
      241 ihvlrnhavg pstslpaghs dihsllgpsh napigslnsn yggsslvtss rsasmvgthr
      301 edsvslngnh svlsstvtas stdlnhktqe nyrgglqsqs gtvvpteikt enkekdenlh
      361 eppssddmks ddessqkdik vssrgrtstn ededlnpeqk ierekerrma nnarerlrvr
      421 dineafkelg rmcqlhlkse kpqtkllilh qavavilsle qqvrernlnp kaaclkrree
      481 ekvsavsaep patlpgthpg lsettnpmgh m
//
LOCUS       XP_061013225             147 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin-conjugating enzyme E2 variant 1-like [Dama dama].
ACCESSION   XP_061013225
VERSION     XP_061013225.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157242.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..147
                     /product="ubiquitin-conjugating enzyme E2 variant 1-like"
                     /calculated_mol_wt=16366
     Region          9..142
                     /region_name="UEV_UBE2V"
                     /note="ubiquitin E2 variant (UEV) domain of
                     ubiquitin-conjugating enzyme E2 variant 1, 2 and related
                     proteins; cd23807"
                     /db_xref="CDD:467427"
     CDS             1..147
                     /gene="LOC133066300"
                     /coded_by="XM_061157242.1:18..461"
                     /db_xref="GeneID:133066300"
ORIGIN      
        1 maattgsgvk vprdfrllee leegqkgvgd gtvswgledd edmtltrwtg mvigpprtiy
       61 enriyslkie cgpkypeapl fvrfvtkinm ngvnssngvv dpraisvlak wqnsysikvv
      121 lqelrrlmms kqnmklpqpp egqcysn
//
LOCUS       XP_061013226            1294 aa            linear   MAM 02-DEC-2023
DEFINITION  cingulin-like protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061013226
VERSION     XP_061013226.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157243.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1294
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1294
                     /product="cingulin-like protein 1 isoform X1"
                     /calculated_mol_wt=147763
     Region          <607..1249
                     /region_name="Myosin_tail_1"
                     /note="Myosin tail; pfam01576"
                     /db_xref="CDD:460256"
     CDS             1..1294
                     /gene="CGNL1"
                     /coded_by="XM_061157243.1:91..3975"
                     /db_xref="GeneID:133066301"
ORIGIN      
        1 melyfgeyqh vqqeygvhlr lasdetrksr npqhakagsy gvsirvqgid ghpyivlnnt
       61 eqclagtsfs engpsfpapm innlplhpsk gsvveensae elqlpenpya ppgpvrnpkq
      121 pslfegknga lerkeeprka spvlnfqrhp ellqpydpek nelslknhqp petswlkalr
      181 eegtnnkkaw tcmpkpshsq ptsppsedpa rsnvtairlc ssvviddpqk qtsvcvnvqs
      241 cskeglaeea lapsgrplpt pslqahleak ktrpdvlpfr rqdsagpvld garsrrssss
      301 sttptsansl yrfllddqec aihadnvnrh enrryipflp gtgrdidtgs ipgvdqliek
      361 fdqkpgmqrr grsgkrnrin pedrkrsrsv dsafpfglqg nleyltefsr nlgkssehll
      421 rpsqvcpqra qeprggqggg rafarllgtq prpplqnkdg kvpenkgaqe sptgltsslp
      481 aqtkkeeeik tatatlmlqn ralatspdsg tkrisvktft stsntqatpd llkgqqeltq
      541 qtneetakqi lynylkegst dnddatkrkv nlvfekiqtl ksraagstqg nnqasnssse
      601 vkdlleqknk lttevaelqt qlqlevknqq nikeerdrmk adlevlqsqh dskveestal
      661 qrrleesega lrrhleelfq vkmereqhqt eirdlqdqls emhdeldsak qsedrekgal
      721 ieellqakqd lqhlliakee qedllrkrer eltalkgalk eevsshdrem dklkeqydae
      781 llalresvee atknvevlas rsstaeqtqv gaemrvkalq eeneklrgsv eelertvarl
      841 qrqladlqdd eakaketlkk cegetrqlee allharkeek eatsakralq teleeaqrnl
      901 sratqeqkql serlkdeaeq keqlrrlkne menerwhldk tieklqkema divevsrtst
      961 lelqnqldey keknrrelae mqrqlkektl eaeksrltam klqdemrlme eelrdhqraq
     1021 eealtkrqll eqtlkdleye leakshlkdd rgrlvkqmed kvsqlemele eernnsdlls
     1081 eritrsreqm eqmrnellqe ramkqdlecd kislerqnkd lksriihleg syrsskeglv
     1141 vqmeariael edrleseerd raslqlsnrr lerkvkelvm qvddehlslt dqkdqlslrl
     1201 kamkrqveea eeeidrless kkklqrelee qmdvneqlqg qlnsmkkdlr lkklpskvld
     1261 dvdddddlst dggslyeapl sytfpkdstv vsqi
//
LOCUS       XP_061013228            1293 aa            linear   MAM 02-DEC-2023
DEFINITION  cingulin-like protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061013228
VERSION     XP_061013228.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157245.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1293
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1293
                     /product="cingulin-like protein 1 isoform X2"
                     /calculated_mol_wt=147676
     Region          <606..1248
                     /region_name="Myosin_tail_1"
                     /note="Myosin tail; pfam01576"
                     /db_xref="CDD:460256"
     CDS             1..1293
                     /gene="CGNL1"
                     /coded_by="XM_061157245.1:91..3972"
                     /db_xref="GeneID:133066301"
ORIGIN      
        1 melyfgeyqh vqqeygvhlr lasdetrksr npqhakagsy gvsirvqgid ghpyivlnnt
       61 eqclagtsfs engpsfpapm innlplhpsk gsvveensae elqlpenpya ppgpvrnpkq
      121 pslfegknga lerkeeprka spvlnfqrhp ellqpydpek nelslknhqp petswlkalr
      181 eegtnnkkaw tcmpkpshsq ptsppsedpa rsnvtairlc ssvviddpqk qtsvcvnvqs
      241 cskeglaeea lapsgrplpt pslqahleak ktrpdvlpfr rqdsagpvld garsrrssss
      301 sttptsansl yrfllddqec aihadnvnrh enrryipflp gtgrdidtgs ipgvdqliek
      361 fdqkpgmqrr grsgkrnrin pedrkrsrsv dsafpfglqg nleyltefsr nlgkssehll
      421 rpsqvcpqra qeprggqggg rafarllgtq prpplqnkdg kvpenkgaqe sptgltsslp
      481 aqtkkeeeik tatatlmlqn ralatspdsg tkrisvktft stsntqatpd llkgqqeltq
      541 qtneetakqi lynylkegtd nddatkrkvn lvfekiqtlk sraagstqgn nqasnsssev
      601 kdlleqknkl ttevaelqtq lqlevknqqn ikeerdrmka dlevlqsqhd skveestalq
      661 rrleesegal rrhleelfqv kmereqhqte irdlqdqlse mhdeldsakq sedrekgali
      721 eellqakqdl qhlliakeeq edllrkrere ltalkgalke evsshdremd klkeqydael
      781 lalresveea tknvevlasr sstaeqtqvg aemrvkalqe eneklrgsve elertvarlq
      841 rqladlqdde akaketlkkc egetrqleea llharkeeke atsakralqt eleeaqrnls
      901 ratqeqkqls erlkdeaeqk eqlrrlknem enerwhldkt ieklqkemad ivevsrtstl
      961 elqnqldeyk eknrrelaem qrqlkektle aeksrltamk lqdemrlmee elrdhqraqe
     1021 ealtkrqlle qtlkdleyel eakshlkddr grlvkqmedk vsqlemelee ernnsdllse
     1081 ritrsreqme qmrnellqer amkqdlecdk islerqnkdl ksriihlegs yrsskeglvv
     1141 qmeariaele drleseerdr aslqlsnrrl erkvkelvmq vddehlsltd qkdqlslrlk
     1201 amkrqveeae eeidrlessk kklqreleeq mdvneqlqgq lnsmkkdlrl kklpskvldd
     1261 vdddddlstd ggslyeapls ytfpkdstvv sqi
//
LOCUS       XP_061013229             463 aa            linear   MAM 02-DEC-2023
DEFINITION  myocardial zonula adherens protein isoform X1 [Dama dama].
ACCESSION   XP_061013229
VERSION     XP_061013229.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157246.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..463
                     /product="myocardial zonula adherens protein isoform X1"
                     /calculated_mol_wt=53759
     Region          102..>423
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..463
                     /gene="MYZAP"
                     /coded_by="XM_061157246.1:102..1493"
                     /db_xref="GeneID:133066302"
ORIGIN      
        1 mlrststvtl lsgsssgapn rranvcrlrl tvppenpvpe psenkverre qhrdlsngea
       61 trklpqgvvy gvvrrsdqnq qkemvvygwt tnqlkeemny ikdvratlek vrkrmygdyd
      121 emrqkirqlt qelsvsqakq dylenhiqtq ssaldsfnam naalasdsis lqktlvdvtl
      181 ensnikdqir nlqqtytasm dklrekqrql daaqvenkll kmkvessqqa naevmremtr
      241 klysqyeqkl qeeqqrhnae kealleetns flkaieeank kmqaaeisle ekdqrigeld
      301 rliermeker hqlqlqlleh etemsveitd snkeryqqle easaslreri rhlddmvhcq
      361 qkkvkqmvee ieslkkkvqq kqllilqlle kisflegenn elqsrldyli etqsktevet
      421 revgvgcdll psqtgrtrei ampsrnytpy trvlelttkk tlt
//
LOCUS       XP_061013230             387 aa            linear   MAM 02-DEC-2023
DEFINITION  myocardial zonula adherens protein isoform X2 [Dama dama].
ACCESSION   XP_061013230
VERSION     XP_061013230.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157247.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..387
                     /product="myocardial zonula adherens protein isoform X2"
                     /calculated_mol_wt=45130
     Region          <93..>344
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..387
                     /gene="MYZAP"
                     /coded_by="XM_061157247.1:102..1265"
                     /db_xref="GeneID:133066302"
ORIGIN      
        1 mlrststvtl lsgsssgapn rranvcrlrl tvppenpvpe psenkverre qhrdlsngea
       61 trklpqgvvy gvvrrsdqnq qkemvvygwt tnqlkeemny ikdvratlek vrkrmygdyd
      121 emrqkirqlt qelsvsqakq dylenhiqtq ssaldsfnam naalasdsis lqktlvdvtl
      181 ensnikdqir nlqqtytasm dklrekqrql daaqvenkll kmkvessqqa naevmremtr
      241 klysqyeqkl qeeqqrhnae kealleetns flkaieeank kmqaaeisle ekdqrigeld
      301 rliermeker hqlqlqlleh etemsveitd snkeryqqle easaslreri rhlddmvhcq
      361 qkkvkqmvee imshelfsrf slrlfgr
//
LOCUS       XP_061013231             370 aa            linear   MAM 02-DEC-2023
DEFINITION  protein GRINL1A [Dama dama].
ACCESSION   XP_061013231
VERSION     XP_061013231.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157248.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..370
                     /product="protein GRINL1A"
                     /calculated_mol_wt=41448
     Region          27..242
                     /region_name="GCOM2"
                     /note="Putative GRINL1B complex locus protein 2;
                     pfam15328"
                     /db_xref="CDD:464649"
     CDS             1..370
                     /gene="POLR2M"
                     /coded_by="XM_061157248.1:138..1250"
                     /db_xref="GeneID:133066303"
ORIGIN      
        1 msslprgfep qtpedlgqrs laelremlkr qerllrnvkf icklpdkgkk isdavaklka
       61 aiaereevrg rselfypvsl hckerqkaia vvdgdrdkaq nsdqildtss plpscssvan
      121 itssqtnsrq qglahltrgg dveateaeht vsehptsssg tpapslseas eglpqycalg
      181 qvedhpgssd nlfidrlqri tiadptehhs egnqspenla slwtgpqkkp hymevlemra
      241 knpmpmphkf ktnvlpsqph dswsacqrrg spvsseerrr rdkkhlddit aarllplhhl
      301 ptqllsiees lalqrqqkqs yeeiqaklaa qklaerlnik mqsynpeges srkyrevrde
      361 dddqssedef
//
LOCUS       XP_061013232             518 aa            linear   MAM 02-DEC-2023
DEFINITION  retinal dehydrogenase 2 isoform X1 [Dama dama].
ACCESSION   XP_061013232
VERSION     XP_061013232.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157249.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..518
                     /product="retinal dehydrogenase 2 isoform X1"
                     /calculated_mol_wt=56574
     Region          32..512
                     /region_name="ALDH_F1AB_F2_RALDH1"
                     /note="NAD+-dependent retinal dehydrogenase 1, ALDH
                     families 1A, 1B, and 2-like; cd07141"
                     /db_xref="CDD:143459"
     Site            order(90..91,95,98,100,104,145,148..149,153,155..156,
                     159..163,165..166,169..176,269,272,275..276,279..280,282,
                     287,452,454,461,464,466..473,480..482,485..488,490,493,
                     498,505..510,512)
                     /site_type="other"
                     /note="homotetrameric interface [polypeptide binding]"
                     /db_xref="CDD:143459"
     Site            order(183..186,210,213,243,247..248,261,264,267,287..288,
                     320,367,370,417)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:143459"
     Site            order(187,286,317,320)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143459"
     CDS             1..518
                     /gene="ALDH1A2"
                     /coded_by="XM_061157249.1:242..1798"
                     /db_xref="GeneID:133066306"
ORIGIN      
        1 mtsseiempg evkadpaalm aslhllpspt pnleikytki finnewqnse sgrvfpvynp
       61 atgeqvcevq eadkadidka vqaarlafsl gsvwrrmdas ergrlldkla dlverdravl
      121 atmeslnggk pflqafyvdl qgviktlryy agwadkihgm tipvdgdyft ftrhepigvc
      181 gqiipwnfpl lmfawkiapa lccgntvvik paeqtplsal ymgalikeag fppgvinilp
      241 gygptagaai ashigidkia ftgstevgkl iqeaagrsnl krvtlelggk spniifadad
      301 ldyaveqahq gvffnqgqcc tagsrifvee siyeefvrrs verakrrivg spfdptteqg
      361 pqidkkqynk ileliqsgva egaklecggk glgrkgffie ptvfsnvtdd mriakeeifg
      421 pvqeilrfkt mdevierann sdfglvaavf tndinkaltv ssamqagtvw incynalnaq
      481 spfggfkmsg ngremgefgl reysevktvt vkipqkns
//
LOCUS       XP_061013233             480 aa            linear   MAM 02-DEC-2023
DEFINITION  retinal dehydrogenase 2 isoform X2 [Dama dama].
ACCESSION   XP_061013233
VERSION     XP_061013233.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157250.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..480
                     /product="retinal dehydrogenase 2 isoform X2"
                     /calculated_mol_wt=52910
     Region          32..474
                     /region_name="ALDH_F1AB_F2_RALDH1"
                     /note="NAD+-dependent retinal dehydrogenase 1, ALDH
                     families 1A, 1B, and 2-like; cd07141"
                     /db_xref="CDD:143459"
     Site            order(90..91,95,98,100,104,145,148..149,153,155..156,
                     159..163,165..166,169..176,231,234,237..238,241..242,244,
                     249,414,416,423,426,428..435,442..444,447..450,452,455,
                     460,467..472,474)
                     /site_type="other"
                     /note="homotetrameric interface [polypeptide binding]"
                     /db_xref="CDD:143459"
     Site            order(187,248,279,282)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143459"
     CDS             1..480
                     /gene="ALDH1A2"
                     /coded_by="XM_061157250.1:243..1685"
                     /db_xref="GeneID:133066306"
ORIGIN      
        1 mtsseiempg evkadpaalm aslhllpspt pnleikytki finnewqnse sgrvfpvynp
       61 atgeqvcevq eadkadidka vqaarlafsl gsvwrrmdas ergrlldkla dlverdravl
      121 atmeslnggk pflqafyvdl qgviktlryy agwadkihgm tipvdgdyft ftrhepigvc
      181 gqiipwnfpl lmfawkiapa lccgntvvik paeqtplsal ymgalikevg kliqeaagrs
      241 nlkrvtlelg gkspniifad adldyaveqa hqgvffnqgq cctagsrifv eesiyeefvr
      301 rsverakrri vgspfdptte qgpqidkkqy nkileliqsg vaegaklecg gkglgrkgff
      361 ieptvfsnvt ddmriakeei fgpvqeilrf ktmdeviera nnsdfglvaa vftndinkal
      421 tvssamqagt vwincynaln aqspfggfkm sgngremgef glreysevkt vtvkipqkns
//
LOCUS       XP_061013234             422 aa            linear   MAM 02-DEC-2023
DEFINITION  retinal dehydrogenase 2 isoform X3 [Dama dama].
ACCESSION   XP_061013234
VERSION     XP_061013234.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157251.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..422
                     /product="retinal dehydrogenase 2 isoform X3"
                     /calculated_mol_wt=45986
     Region          1..416
                     /region_name="ALDH_F1AB_F2_RALDH1"
                     /note="NAD+-dependent retinal dehydrogenase 1, ALDH
                     families 1A, 1B, and 2-like; cd07141"
                     /db_xref="CDD:143459"
     Site            order(2,4,8,49,52..53,57,59..60,63..67,69..70,73..80,173,
                     176,179..180,183..184,186,191,356,358,365,368,370..377,
                     384..386,389..392,394,397,402,409..414,416)
                     /site_type="other"
                     /note="homotetrameric interface [polypeptide binding]"
                     /db_xref="CDD:143459"
     Site            order(87..90,114,117,147,151..152,165,168,171,191..192,
                     224,271,274,321)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:143459"
     Site            order(91,190,221,224)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143459"
     CDS             1..422
                     /gene="ALDH1A2"
                     /coded_by="XM_061157251.1:211..1479"
                     /db_xref="GeneID:133066306"
ORIGIN      
        1 mdasergrll dkladlverd ravlatmesl nggkpflqaf yvdlqgvikt lryyagwadk
       61 ihgmtipvdg dyftftrhep igvcgqiipw nfpllmfawk iapalccgnt vvikpaeqtp
      121 lsalymgali keagfppgvi nilpgygpta gaaiashigi dkiaftgste vgkliqeaag
      181 rsnlkrvtle lggkspniif adadldyave qahqgvffnq gqcctagsri fveesiyeef
      241 vrrsverakr rivgspfdpt teqgpqidkk qynkileliq sgvaegakle cggkglgrkg
      301 ffieptvfsn vtddmriake eifgpvqeil rfktmdevie rannsdfglv aavftndink
      361 altvssamqa gtvwincyna lnaqspfggf kmsgngremg efglreysev ktvtvkipqk
      421 ns
//
LOCUS       XP_061013235             500 aa            linear   MAM 02-DEC-2023
DEFINITION  hepatic triacylglycerol lipase isoform X1 [Dama dama].
ACCESSION   XP_061013235
VERSION     XP_061013235.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157252.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..500
                     /product="hepatic triacylglycerol lipase isoform X1"
                     /calculated_mol_wt=56536
     Region          23..350
                     /region_name="Lipase"
                     /note="pfam00151"
                     /db_xref="CDD:395099"
     Region          353..488
                     /region_name="PLAT_LPL"
                     /note="PLAT/ LH2 domain present in lipoprotein lipase
                     (LPL). LPL is a key enzyme in catabolism of plasma
                     lipoprotein triglycerides (TGs) and has therefeore has a
                     profound influence on triglyceride and high-density
                     lipoprotein (HDL) cholesterol levels in the...; cd01758"
                     /db_xref="CDD:238856"
     CDS             1..500
                     /gene="LIPC"
                     /coded_by="XM_061157252.1:416..1918"
                     /db_xref="GeneID:133066307"
ORIGIN      
        1 menplcvsif lflciliqss ahgqslgtes fgrrsraaet netlketrtr fllfrgetdk
       61 gcqirlthsd tlqqcgfnss lplvmivhgw lvdgiledwv wemvaalksh laqpvnvgla
      121 ewvtlahnhy ttavrntrlv gqeiaallqw lqesvqfsps hvhligyslg ahvsgfagsy
      181 msrkhkigri tgldaagplf ekaslsdrls pddasfvdai htftwehmgl svgikqpiah
      241 ydfypnggsy qpgchflely khfakhglna itqtvkcahe rsvhlfidsl lhadmqstay
      301 lcrdmdsfsq glclsckkgr cntlgyhtrq erqskksksl flvtraqspf kvyhyqfkir
      361 finqtensve ptftvsflgt rgerqkipit lskgitsnet ysflitldvd igelimikfk
      421 wensmvwsnv wntvqtiipw rkeslhsgla lksirvkvge tqqrmtfcse nmndlqlhpa
      481 qektfvrcea nsetlkqkir
//
LOCUS       XP_061013236             416 aa            linear   MAM 02-DEC-2023
DEFINITION  hepatic triacylglycerol lipase isoform X2 [Dama dama].
ACCESSION   XP_061013236
VERSION     XP_061013236.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157253.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..416
                     /product="hepatic triacylglycerol lipase isoform X2"
                     /calculated_mol_wt=47198
     Region          <8..266
                     /region_name="Lipase"
                     /note="pfam00151"
                     /db_xref="CDD:395099"
     Region          269..404
                     /region_name="PLAT_LPL"
                     /note="PLAT/ LH2 domain present in lipoprotein lipase
                     (LPL). LPL is a key enzyme in catabolism of plasma
                     lipoprotein triglycerides (TGs) and has therefeore has a
                     profound influence on triglyceride and high-density
                     lipoprotein (HDL) cholesterol levels in the...; cd01758"
                     /db_xref="CDD:238856"
     CDS             1..416
                     /gene="LIPC"
                     /coded_by="XM_061157253.1:480..1730"
                     /db_xref="GeneID:133066307"
ORIGIN      
        1 mdkaweqvdg iledwvwemv aalkshlaqp vnvglaewvt lahnhyttav rntrlvgqei
       61 aallqwlqes vqfspshvhl igyslgahvs gfagsymsrk hkigritgld aagplfekas
      121 lsdrlspdda sfvdaihtft wehmglsvgi kqpiahydfy pnggsyqpgc hflelykhfa
      181 khglnaitqt vkcahersvh lfidsllhad mqstaylcrd mdsfsqglcl sckkgrcntl
      241 gyhtrqerqs kkskslflvt raqspfkvyh yqfkirfinq tensveptft vsflgtrger
      301 qkipitlskg itsnetysfl itldvdigel imikfkwens mvwsnvwntv qtiipwrkes
      361 lhsglalksi rvkvgetqqr mtfcsenmnd lqlhpaqekt fvrceanset lkqkir
//
LOCUS       XP_061013237             295 aa            linear   MAM 02-DEC-2023
DEFINITION  aquaporin-9 [Dama dama].
ACCESSION   XP_061013237
VERSION     XP_061013237.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157254.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..295
                     /product="aquaporin-9"
                     /calculated_mol_wt=31694
     Region          21..267
                     /region_name="GlpF"
                     /note="Glycerol uptake facilitator or related aquaporin
                     (Major Intrinsic protein Family) [Carbohydrate transport
                     and metabolism]; COG0580"
                     /db_xref="CDD:440345"
     CDS             1..295
                     /gene="AQP9"
                     /coded_by="XM_061157254.1:269..1156"
                     /db_xref="GeneID:133066309"
ORIGIN      
        1 mqpemeqkkk slkqrlvlkn tlaketlsef lgtfimivlg cgsvaqavls rghfggiiti
       61 nigfpmavvm aiyvaagvsg ghvnpavsfa lclfgrmkwf kfpfyvgaql lgafvgsatl
      121 fgiyydafms faggkllivg enatahifat ypapylslan afaeqvvatt lllivifaif
      181 dsrnlgvprg lepviiglli vtiasslgmn sgcamnpard lsprlftala gwgfevftvg
      241 nnfwwipvvg plvgaalggl iyfllieihh pdlnpdlete qpedkpekye lnaim
//
LOCUS       XP_061013238             748 aa            linear   MAM 02-DEC-2023
DEFINITION  disintegrin and metalloproteinase domain-containing protein 10
            [Dama dama].
ACCESSION   XP_061013238
VERSION     XP_061013238.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157255.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..748
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..748
                     /product="disintegrin and metalloproteinase
                     domain-containing protein 10"
                     /calculated_mol_wt=84109
     Region          46..156
                     /region_name="Pep_M12B_propep"
                     /note="Reprolysin family propeptide; pfam01562"
                     /db_xref="CDD:460254"
     Region          220..459
                     /region_name="ZnMc_TACE_like"
                     /note="Zinc-dependent metalloprotease; TACE_like
                     subfamily. TACE, the tumor-necrosis factor-alpha
                     converting enzyme, releases soluble TNF-alpha from
                     transmembrane pro-TNF-alpha; cd04270"
                     /db_xref="CDD:239798"
     Site            order(383..384,387,393)
                     /site_type="active"
                     /db_xref="CDD:239798"
     Region          466..545
                     /region_name="DISIN"
                     /note="Homologues of snake disintegrins; smart00050"
                     /db_xref="CDD:214490"
     CDS             1..748
                     /gene="ADAM10"
                     /coded_by="XM_061157255.1:253..2499"
                     /db_xref="GeneID:133066310"
ORIGIN      
        1 mvllrvlfll lswvpglggq ygnplnkyir hyeglsydvd slhqkhqrak ravshedqfl
       61 rldfhahgrh fnlrmkrdts lfseefrvet snavldydts hiytghiyge egsfshgsvi
      121 dgrfegfiqt hggtfyvepa eryikdrtlp fhsviyhedd ikyphkygpq ggcadhsvfe
      181 rmrkyqmtgv eevtqtpqee haingpkllr kkrttvaekn tcqlyiqtdh lffkyygtre
      241 aviaqisshv kaidtiyqtt dfsgirnisf mvkririntt adekdptnpf rfpnigvekf
      301 lelnseqnhd dyclayvftd rdfddgvlgl awvgapsgss ggicekskly sdgkkkslnt
      361 giitvqnygs hvppkvshit fahevghnfg sphdsgtect pgesknlgqk engnyimyar
      421 atsgdklnnn kfslcsirni sqvlekkrnn cfvesgqpic gngmveqgee cdcgysdqck
      481 deccydanqp egkkcklkpg kqcspsqgpc ctaqcafksk tekcrddsdc akegicngit
      541 alcpasdpkp nftdcnrhtq vcingqcags icekhgleec tcassdgkdd kelchvccmk
      601 kmepstcast gsvqwnkyfl grtitlqpgs pcndfrgycd vfmrcrlvda dgplarlkka
      661 ifspelyeni aewivaywwa vllmgialim lmagfikics vhtpssnpkl pppkplpgtl
      721 krrrppqpiq qpqrqrpres yqmghmrr
//
LOCUS       XP_061013240             629 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin carboxyl-terminal hydrolase MINDY-2 isoform X1 [Dama
            dama].
ACCESSION   XP_061013240
VERSION     XP_061013240.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157257.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..629
                     /product="ubiquitin carboxyl-terminal hydrolase MINDY-2
                     isoform X1"
                     /calculated_mol_wt=67745
     Region          <12..>209
                     /region_name="PRK07003"
                     /note="DNA polymerase III subunit gamma/tau"
                     /db_xref="CDD:235906"
     Region          283..394
                     /region_name="MINDY_DUB"
                     /note="MINDY deubiquitinase; pfam04424"
                     /db_xref="CDD:461303"
     CDS             1..629
                     /gene="MINDY2"
                     /coded_by="XM_061157257.1:124..2013"
                     /db_xref="GeneID:133066312"
ORIGIN      
        1 mesgpeslqp lehgvaagpa pgtgspqegq qetrlaagdg pgvwaaessg gkgqgavaag
       61 rslsdsaspa gspqvlvpcs slpsldlkes dlespaaqkk plggqhkvta spetaeagad
      121 hglgpageag arpdpagtcr eesaaagsse pssggglsss csdpsppges psldslesfs
      181 nlpsfpssse fnseegaenr vpeeeegaav lpgavplcge evveeeeget aqvlaasker
      241 fpgqsvyhik wiqwkeentp iitqnengpc pllailnvll lawkvklppm meiitaeqlm
      301 eylgdymldt kpkeiseiqr lnyeqnmsda mavlhklqtg ldvnvkftgv rvfeytpeci
      361 vfdlldiply hgwlvdpqid divkavgncs ynqlvekiis ckqsenselv segfvaeqfl
      421 nntatqltyh glceltstvq egelcvffrn nhfstmtkyk gllyllvtdq gflteekvvw
      481 eslhnvdgdg nfcdsefhlr ppsdpetvyr gqqdqidqdy lmalslqqeq qsqeinweqi
      541 pegisdlela kklqeeedrr asqyyqeqeq aaaaaasasa sastqapqsq paqaspssgr
      601 qsgnserkrk eprekdkeke keknscvil
//
LOCUS       XP_061013241             547 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin carboxyl-terminal hydrolase MINDY-2 isoform X2 [Dama
            dama].
ACCESSION   XP_061013241
VERSION     XP_061013241.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157258.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..547
                     /product="ubiquitin carboxyl-terminal hydrolase MINDY-2
                     isoform X2"
                     /calculated_mol_wt=58505
     Region          <12..>209
                     /region_name="PRK07003"
                     /note="DNA polymerase III subunit gamma/tau"
                     /db_xref="CDD:235906"
     Region          283..378
                     /region_name="MINDY_DUB"
                     /note="MINDY deubiquitinase; pfam04424"
                     /db_xref="CDD:461303"
     CDS             1..547
                     /gene="MINDY2"
                     /coded_by="XM_061157258.1:127..1770"
                     /db_xref="GeneID:133066312"
ORIGIN      
        1 mesgpeslqp lehgvaagpa pgtgspqegq qetrlaagdg pgvwaaessg gkgqgavaag
       61 rslsdsaspa gspqvlvpcs slpsldlkes dlespaaqkk plggqhkvta spetaeagad
      121 hglgpageag arpdpagtcr eesaaagsse pssggglsss csdpsppges psldslesfs
      181 nlpsfpssse fnseegaenr vpeeeegaav lpgavplcge evveeeeget aqvlaasker
      241 fpgqsvyhik wiqwkeentp iitqnengpc pllailnvll lawkvklppm meiitaeqlm
      301 eylgdymldt kpkeiseiqr lnyeqnmsda mavlhklqtg ldvnvkftgv rvfeytpeci
      361 vfdlldiply hgwlvdpqgl lyllvtdqgf lteekvvwes lhnvdgdgnf cdsefhlrpp
      421 sdpetvyrgq qdqidqdylm alslqqeqqs qeinweqipe gisdlelakk lqeeedrras
      481 qyyqeqeqaa aaaasasasa stqapqsqpa qaspssgrqs gnserkrkep rekdkekeke
      541 knscvil
//
LOCUS       XP_061013242            1034 aa            linear   MAM 02-DEC-2023
DEFINITION  SAFB-like transcription modulator isoform X1 [Dama dama].
ACCESSION   XP_061013242
VERSION     XP_061013242.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157259.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1034
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1034
                     /product="SAFB-like transcription modulator isoform X1"
                     /calculated_mol_wt=117003
     Region          22..56
                     /region_name="SAP"
                     /note="Putative DNA-binding (bihelical) motif predicted to
                     be involved in chromosomal organisation; smart00513"
                     /db_xref="CDD:128789"
     Region          <145..747
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          385..458
                     /region_name="RRM_SLTM"
                     /note="RNA recognition motif (RRM) found in Scaffold
                     attachment factor (SAF)-like transcription modulator
                     (SLTM) and similar proteins; cd12678"
                     /db_xref="CDD:410079"
     CDS             1..1034
                     /gene="SLTM"
                     /coded_by="XM_061157259.1:92..3196"
                     /db_xref="GeneID:133066313"
ORIGIN      
        1 maaatgavaa saasgqaegk kitdlrvidl kselkrrnld itgvktvlvs rlkqaieeeg
       61 gdpdnieltv stdtpnkkpt kgkgkkqead elsgdasved dafvkdcele nqeaheqdgn
      121 delkdseefg eneeenvhsk ellsaeenkt ahelieaeav ediekedies qeieaqeged
      181 dtfltaqdae eeenekdiag sgdgtqevsk plpsegnlae adhtaheeme anatvkeaed
      241 dnisvtiqae daitldfdgd dlletgknvk itdseaskpk dgqdviaqsp ekeskdyemn
      301 anhkdgkked cvkgdpveke aregskkaes gdkekdtlkk gpsstgasgq akssskeskd
      361 sktsskddkg stisasgssg sstkniwvsg lssntkaadl knlfgkygkv lsakvvtnar
      421 spgakcygiv tmssstevsr ciahlhrtel hgqlisvekv kgdpskkelk keideksssr
      481 ssgdkknmsd rssktqasvk keekrlsekt ekkegkdtkk legkdekndn gssgqtsesi
      541 kkseekkris skspghmvil dqtkgdhcrp srrgryekih grsmekeras ldkkrdkdyr
      601 rkdilpfekm keqrlrehlv rferlrrame lrrrreiaer errereriri irereererl
      661 qrererleie rqklererme rerlererir ieqerrkeae riarereelr rqqqqlryeq
      721 ekrnslkrpr dvdhrrddpy wsenkklsld tdarfshgsd ysrqqnrfnd fdhrergrfp
      781 esssiqsssf drrerfvgqs egkkprpsar redlgferyp knfsdsrrne pppprnelre
      841 tdrrevrger derrtviihd rpdtthprhp reggpnpsrp tswkaeggms tdkretrver
      901 persgrevsg hsvrgappgt rsnasgygnr egdrgvitdr gsgaqhypee rhvverhgrd
      961 tsgprkewhg ppsqgpgyhd trrmgdgrtg agmitqhtsn aspinrivqi sgnsmprgsg
     1021 sgfkpfkggp prrf
//
LOCUS       XP_061013243            1016 aa            linear   MAM 02-DEC-2023
DEFINITION  SAFB-like transcription modulator isoform X2 [Dama dama].
ACCESSION   XP_061013243
VERSION     XP_061013243.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157260.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1016
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1016
                     /product="SAFB-like transcription modulator isoform X2"
                     /calculated_mol_wt=115263
     Region          22..56
                     /region_name="SAP"
                     /note="Putative DNA-binding (bihelical) motif predicted to
                     be involved in chromosomal organisation; smart00513"
                     /db_xref="CDD:128789"
     Region          <145..729
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          367..440
                     /region_name="RRM_SLTM"
                     /note="RNA recognition motif (RRM) found in Scaffold
                     attachment factor (SAF)-like transcription modulator
                     (SLTM) and similar proteins; cd12678"
                     /db_xref="CDD:410079"
     CDS             1..1016
                     /gene="SLTM"
                     /coded_by="XM_061157260.1:92..3142"
                     /db_xref="GeneID:133066313"
ORIGIN      
        1 maaatgavaa saasgqaegk kitdlrvidl kselkrrnld itgvktvlvs rlkqaieeeg
       61 gdpdnieltv stdtpnkkpt kgkgkkqead elsgdasved dafvkdcele nqeaheqdgn
      121 delkdseefg eneeenvhsk ellsaeenkt ahelieaeav ediekedies qeieaqeged
      181 dtfltaqdae eeenekegnl aeadhtahee meanatvkea eddnisvtiq aedaitldfd
      241 gddlletgkn vkitdseask pkdgqdviaq spekeskdye mnanhkdgkk edcvkgdpve
      301 kearegskka esgdkekdtl kkgpsstgas gqakssskes kdsktsskdd kgstisasgs
      361 sgsstkniwv sglssntkaa dlknlfgkyg kvlsakvvtn arspgakcyg ivtmssstev
      421 srciahlhrt elhgqlisve kvkgdpskke lkkeidekss srssgdkknm sdrssktqas
      481 vkkeekrlse ktekkegkdt kklegkdekn dngssgqtse sikkseekkr isskspghmv
      541 ildqtkgdhc rpsrrgryek ihgrsmeker asldkkrdkd yrrkdilpfe kmkeqrlreh
      601 lvrferlrra melrrrreia ererrereri riirereere rlqrererle ierqklerer
      661 mererlerer irieqerrke aeriareree lrrqqqqlry eqekrnslkr prdvdhrrdd
      721 pywsenkkls ldtdarfshg sdysrqqnrf ndfdhrergr fpesssiqss sfdrrerfvg
      781 qsegkkprps arredlgfer ypknfsdsrr nepppprnel retdrrevrg erderrtvii
      841 hdrpdtthpr hpreggpnps rptswkaegg mstdkretrv erpersgrev sghsvrgapp
      901 gtrsnasgyg nregdrgvit drgsgaqhyp eerhvverhg rdtsgprkew hgppsqgpgy
      961 hdtrrmgdgr tgagmitqht snaspinriv qisgnsmprg sgsgfkpfkg gpprrf
//
LOCUS       XP_061013244            1015 aa            linear   MAM 02-DEC-2023
DEFINITION  SAFB-like transcription modulator isoform X3 [Dama dama].
ACCESSION   XP_061013244
VERSION     XP_061013244.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157261.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1015
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1015
                     /product="SAFB-like transcription modulator isoform X3"
                     /calculated_mol_wt=115134
     Region          22..56
                     /region_name="SAP"
                     /note="Putative DNA-binding (bihelical) motif predicted to
                     be involved in chromosomal organisation; smart00513"
                     /db_xref="CDD:128789"
     Region          <139..728
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          366..439
                     /region_name="RRM_SLTM"
                     /note="RNA recognition motif (RRM) found in Scaffold
                     attachment factor (SAF)-like transcription modulator
                     (SLTM) and similar proteins; cd12678"
                     /db_xref="CDD:410079"
     CDS             1..1015
                     /gene="SLTM"
                     /coded_by="XM_061157261.1:92..3139"
                     /db_xref="GeneID:133066313"
ORIGIN      
        1 maaatgavaa saasgqaegk kitdlrvidl kselkrrnld itgvktvlvs rlkqaieeeg
       61 gdpdnieltv stdtpnkkpt kgkgkkqead elsgdasved dafvkdcele nqeaheqdgn
      121 delkdseefg eneeenvhsk ellsaeenkt ahelieaeav ediekedies qeieaqeged
      181 dtfltaqdae eeenekgnla eadhtaheem eanatvkeae ddnisvtiqa edaitldfdg
      241 ddlletgknv kitdseaskp kdgqdviaqs pekeskdyem nanhkdgkke dcvkgdpvek
      301 earegskkae sgdkekdtlk kgpsstgasg qakssskesk dsktsskddk gstisasgss
      361 gsstkniwvs glssntkaad lknlfgkygk vlsakvvtna rspgakcygi vtmssstevs
      421 rciahlhrte lhgqlisvek vkgdpskkel kkeideksss rssgdkknms drssktqasv
      481 kkeekrlsek tekkegkdtk klegkdeknd ngssgqtses ikkseekkri sskspghmvi
      541 ldqtkgdhcr psrrgryeki hgrsmekera sldkkrdkdy rrkdilpfek mkeqrlrehl
      601 vrferlrram elrrrreiae rerrererir iirereerer lqrererlei erqklererm
      661 ererlereri rieqerrkea eriarereel rrqqqqlrye qekrnslkrp rdvdhrrddp
      721 ywsenkklsl dtdarfshgs dysrqqnrfn dfdhrergrf pesssiqsss fdrrerfvgq
      781 segkkprpsa rredlgfery pknfsdsrrn epppprnelr etdrrevrge rderrtviih
      841 drpdtthprh preggpnpsr ptswkaeggm stdkretrve rpersgrevs ghsvrgappg
      901 trsnasgygn regdrgvitd rgsgaqhype erhvverhgr dtsgprkewh gppsqgpgyh
      961 dtrrmgdgrt gagmitqhts naspinrivq isgnsmprgs gsgfkpfkgg pprrf
//
LOCUS       XP_061013245            1014 aa            linear   MAM 02-DEC-2023
DEFINITION  SAFB-like transcription modulator isoform X4 [Dama dama].
ACCESSION   XP_061013245
VERSION     XP_061013245.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157262.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1014
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1014
                     /product="SAFB-like transcription modulator isoform X4"
                     /calculated_mol_wt=115024
     Region          22..56
                     /region_name="SAP"
                     /note="Putative DNA-binding (bihelical) motif predicted to
                     be involved in chromosomal organisation; smart00513"
                     /db_xref="CDD:128789"
     Region          <145..747
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          385..458
                     /region_name="RRM_SLTM"
                     /note="RNA recognition motif (RRM) found in Scaffold
                     attachment factor (SAF)-like transcription modulator
                     (SLTM) and similar proteins; cd12678"
                     /db_xref="CDD:410079"
     CDS             1..1014
                     /gene="SLTM"
                     /coded_by="XM_061157262.1:92..3136"
                     /db_xref="GeneID:133066313"
ORIGIN      
        1 maaatgavaa saasgqaegk kitdlrvidl kselkrrnld itgvktvlvs rlkqaieeeg
       61 gdpdnieltv stdtpnkkpt kgkgkkqead elsgdasved dafvkdcele nqeaheqdgn
      121 delkdseefg eneeenvhsk ellsaeenkt ahelieaeav ediekedies qeieaqeged
      181 dtfltaqdae eeenekdiag sgdgtqevsk plpsegnlae adhtaheeme anatvkeaed
      241 dnisvtiqae daitldfdgd dlletgknvk itdseaskpk dgqdviaqsp ekeskdyemn
      301 anhkdgkked cvkgdpveke aregskkaes gdkekdtlkk gpsstgasgq akssskeskd
      361 sktsskddkg stisasgssg sstkniwvsg lssntkaadl knlfgkygkv lsakvvtnar
      421 spgakcygiv tmssstevsr ciahlhrtel hgqlisvekv kgdpskkelk keideksssr
      481 ssgdkknmsd rssktqasvk keekrlsekt ekkegkdtkk legkdekndn gssgqtsesi
      541 kkseekkris skspghmvil dqtkgdhcrp srrgryekih grsmekeras ldkkrdkdyr
      601 rkdilpfekm keqrlrehlv rferlrrame lrrrreiaer errereriri irereererl
      661 qrererleie rqklererme rerlererir ieqerrkeae riarereelr rqqqqlryeq
      721 ekrnslkrpr dvdhrrddpy wsenkklsld tdarfshgsd ysrqqnrfnd fdhrergrfp
      781 esssiqsssf drrerfvgqs egkkprpsar redlgferyp knfsdsrrne pppprnelre
      841 tdrrevrger derrtviihd rpdtthprhp reggpnpsrp tswkaeggms tdkretrver
      901 persgrevsg hsvrgappgt rsnasgygnr egdrgvitdr gsgaqhypee rhvverhgrd
      961 tsgprkewhg ppsqgpgyhd trrmgdgrtg agmitqhtss ikifghlsqs lfrc
//
LOCUS       XP_061013246            1003 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase Arkadia isoform X1 [Dama dama].
ACCESSION   XP_061013246
VERSION     XP_061013246.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157263.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1003
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1003
                     /product="E3 ubiquitin-protein ligase Arkadia isoform X1"
                     /calculated_mol_wt=110071
     Region          18..292
                     /region_name="RNF111_N"
                     /note="E3 ubiquitin-protein ligase Arkadia N-terminus;
                     pfam15303"
                     /db_xref="CDD:464629"
     Region          352..>539
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          <416..747
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          939..999
                     /region_name="RING-H2_RNF111"
                     /note="RING finger, H2 subclass, found in RING finger
                     protein 111 (RNF111) and similar proteins; cd16681"
                     /db_xref="CDD:438343"
     CDS             1..1003
                     /gene="RNF111"
                     /coded_by="XM_061157263.1:392..3403"
                     /db_xref="GeneID:133066314"
ORIGIN      
        1 msqwtpeynk lytlkvdmks eipsdapktq eslkgillhp epigaaksfp agveminskv
       61 gnefshlcdd sqkqekdmng nqqeqeksvv vrkkrksqqa gpsymqncak enqgilglrq
      121 hletpsdedn dssfsdclss pssslhfgds dtvtsdedke vsvrhsqail saksrthssr
      181 shkwprtete svsgllmkrp cfhssslrrl pcrkrfvknn ssqrtqkqke rilmqrkkre
      241 vlarrkyall pssssssend lssessssss tegeedlfvs tsenhqnnpt vpsgnidedv
      301 vvieasstpq itaneeinvt stdseveivt vgesyrsrst lghnrshwsq gssshtsrpq
      361 eprnrnrmst viqplrqnaa evvdltvded eptvvpttsa rmesqttsas innsnpstse
      421 qasdtasavt ssqpstvset sttltsnsmt gtstgddsrr tasnavtetg ppamprlpsc
      481 cpqhspcggs sqnhhalghp htscfqqhgh hfqhhhhhhh pphpavpvsp sfsdpacpve
      541 rppqvqppcg anstssasyh dqqalpvdls ssgirshgsa gfhgasafdp ccpvsssraa
      601 ifghqaaaaa apsqplsidg ygssmvaqpq pqppppasls scrhympppy asltrplhhq
      661 tsacphshgn pppqtqpppq vdyviphpvh afhsqissha tshpvapppp thlastaapi
      721 pqhlppthqp ishhipatap paqrlhphem mqrmevqrrr mmqhptglfv fcvsrraher
      781 ppphphrmhp nyghghhihv pqtmsshprq apersawelg ieagvtaaty tpgalhphla
      841 hyhapprlhh lqlgalplmv pdmagyphir yissgldgts frgpfrgnfe elihleerlg
      901 nvnrgasqgt ierctyphky kkvttdwfsq rklhckqdge egteedteek cticlsilee
      961 gedvrrlpcm hlfhqvcvdq wlitnkkcpi crvdieaqlp ses
//
LOCUS       XP_061013247            1003 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase Arkadia isoform X1 [Dama dama].
ACCESSION   XP_061013247
VERSION     XP_061013247.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157264.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1003
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1003
                     /product="E3 ubiquitin-protein ligase Arkadia isoform X1"
                     /calculated_mol_wt=110071
     Region          18..292
                     /region_name="RNF111_N"
                     /note="E3 ubiquitin-protein ligase Arkadia N-terminus;
                     pfam15303"
                     /db_xref="CDD:464629"
     Region          352..>539
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          <416..747
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          939..999
                     /region_name="RING-H2_RNF111"
                     /note="RING finger, H2 subclass, found in RING finger
                     protein 111 (RNF111) and similar proteins; cd16681"
                     /db_xref="CDD:438343"
     CDS             1..1003
                     /gene="RNF111"
                     /coded_by="XM_061157264.1:157..3168"
                     /db_xref="GeneID:133066314"
ORIGIN      
        1 msqwtpeynk lytlkvdmks eipsdapktq eslkgillhp epigaaksfp agveminskv
       61 gnefshlcdd sqkqekdmng nqqeqeksvv vrkkrksqqa gpsymqncak enqgilglrq
      121 hletpsdedn dssfsdclss pssslhfgds dtvtsdedke vsvrhsqail saksrthssr
      181 shkwprtete svsgllmkrp cfhssslrrl pcrkrfvknn ssqrtqkqke rilmqrkkre
      241 vlarrkyall pssssssend lssessssss tegeedlfvs tsenhqnnpt vpsgnidedv
      301 vvieasstpq itaneeinvt stdseveivt vgesyrsrst lghnrshwsq gssshtsrpq
      361 eprnrnrmst viqplrqnaa evvdltvded eptvvpttsa rmesqttsas innsnpstse
      421 qasdtasavt ssqpstvset sttltsnsmt gtstgddsrr tasnavtetg ppamprlpsc
      481 cpqhspcggs sqnhhalghp htscfqqhgh hfqhhhhhhh pphpavpvsp sfsdpacpve
      541 rppqvqppcg anstssasyh dqqalpvdls ssgirshgsa gfhgasafdp ccpvsssraa
      601 ifghqaaaaa apsqplsidg ygssmvaqpq pqppppasls scrhympppy asltrplhhq
      661 tsacphshgn pppqtqpppq vdyviphpvh afhsqissha tshpvapppp thlastaapi
      721 pqhlppthqp ishhipatap paqrlhphem mqrmevqrrr mmqhptglfv fcvsrraher
      781 ppphphrmhp nyghghhihv pqtmsshprq apersawelg ieagvtaaty tpgalhphla
      841 hyhapprlhh lqlgalplmv pdmagyphir yissgldgts frgpfrgnfe elihleerlg
      901 nvnrgasqgt ierctyphky kkvttdwfsq rklhckqdge egteedteek cticlsilee
      961 gedvrrlpcm hlfhqvcvdq wlitnkkcpi crvdieaqlp ses
//
LOCUS       XP_061013248            1002 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase Arkadia isoform X2 [Dama dama].
ACCESSION   XP_061013248
VERSION     XP_061013248.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157265.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1002
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1002
                     /product="E3 ubiquitin-protein ligase Arkadia isoform X2"
                     /calculated_mol_wt=109942
     Region          18..292
                     /region_name="RNF111_N"
                     /note="E3 ubiquitin-protein ligase Arkadia N-terminus;
                     pfam15303"
                     /db_xref="CDD:464629"
     Region          399..>539
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          938..998
                     /region_name="RING-H2_RNF111"
                     /note="RING finger, H2 subclass, found in RING finger
                     protein 111 (RNF111) and similar proteins; cd16681"
                     /db_xref="CDD:438343"
     CDS             1..1002
                     /gene="RNF111"
                     /coded_by="XM_061157265.1:392..3400"
                     /db_xref="GeneID:133066314"
ORIGIN      
        1 msqwtpeynk lytlkvdmks eipsdapktq eslkgillhp epigaaksfp agveminskv
       61 gnefshlcdd sqkqekdmng nqqeqeksvv vrkkrksqqa gpsymqncak enqgilglrq
      121 hletpsdedn dssfsdclss pssslhfgds dtvtsdedke vsvrhsqail saksrthssr
      181 shkwprtete svsgllmkrp cfhssslrrl pcrkrfvknn ssqrtqkqke rilmqrkkre
      241 vlarrkyall pssssssend lssessssss tegeedlfvs tsenhqnnpt vpsgnidedv
      301 vvieasstpq itaneeinvt stdseveivt vgesyrsrst lghnrshwsq gssshtsrpq
      361 eprnrnrmst viqplrqnaa evvdltvded eptvvpttsa rmesqttsas innsnpstse
      421 qasdtasavt ssqpstvset sttltsnsmt gtstgddsrr tasnavtetg ppamprlpsc
      481 cpqhspcggs sqnhhalghp htscfqqhgh hfqhhhhhhh pphpavpvsp sfsdpacpve
      541 rppqvqppcg anstssasyh dqalpvdlss sgirshgsag fhgasafdpc cpvsssraai
      601 fghqaaaaaa psqplsidgy gssmvaqpqp qppppaslss crhympppya sltrplhhqt
      661 sacphshgnp ppqtqpppqv dyviphpvha fhsqisshat shpvappppt hlastaapip
      721 qhlppthqpi shhipatapp aqrlhphemm qrmevqrrrm mqhptglfvf cvsrraherp
      781 pphphrmhpn yghghhihvp qtmsshprqa persawelgi eagvtaatyt pgalhphlah
      841 yhapprlhhl qlgalplmvp dmagyphiry issgldgtsf rgpfrgnfee lihleerlgn
      901 vnrgasqgti erctyphkyk kvttdwfsqr klhckqdgee gteedteekc ticlsileeg
      961 edvrrlpcmh lfhqvcvdqw litnkkcpic rvdieaqlps es
//
LOCUS       XP_061013249             995 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase Arkadia isoform X3 [Dama dama].
ACCESSION   XP_061013249
VERSION     XP_061013249.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157266.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..995
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..995
                     /product="E3 ubiquitin-protein ligase Arkadia isoform X3"
                     /calculated_mol_wt=109106
     Region          18..292
                     /region_name="RNF111_N"
                     /note="E3 ubiquitin-protein ligase Arkadia N-terminus;
                     pfam15303"
                     /db_xref="CDD:464629"
     Region          352..>539
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          <416..747
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          931..991
                     /region_name="RING-H2_RNF111"
                     /note="RING finger, H2 subclass, found in RING finger
                     protein 111 (RNF111) and similar proteins; cd16681"
                     /db_xref="CDD:438343"
     CDS             1..995
                     /gene="RNF111"
                     /coded_by="XM_061157266.1:392..3379"
                     /db_xref="GeneID:133066314"
ORIGIN      
        1 msqwtpeynk lytlkvdmks eipsdapktq eslkgillhp epigaaksfp agveminskv
       61 gnefshlcdd sqkqekdmng nqqeqeksvv vrkkrksqqa gpsymqncak enqgilglrq
      121 hletpsdedn dssfsdclss pssslhfgds dtvtsdedke vsvrhsqail saksrthssr
      181 shkwprtete svsgllmkrp cfhssslrrl pcrkrfvknn ssqrtqkqke rilmqrkkre
      241 vlarrkyall pssssssend lssessssss tegeedlfvs tsenhqnnpt vpsgnidedv
      301 vvieasstpq itaneeinvt stdseveivt vgesyrsrst lghnrshwsq gssshtsrpq
      361 eprnrnrmst viqplrqnaa evvdltvded eptvvpttsa rmesqttsas innsnpstse
      421 qasdtasavt ssqpstvset sttltsnsmt gtstgddsrr tasnavtetg ppamprlpsc
      481 cpqhspcggs sqnhhalghp htscfqqhgh hfqhhhhhhh pphpavpvsp sfsdpacpve
      541 rppqvqppcg anstssasyh dqqalpvdls ssgirshgsa gfhgasafdp ccpvsssraa
      601 ifghqaaaaa apsqplsidg ygssmvaqpq pqppppasls scrhympppy asltrplhhq
      661 tsacphshgn pppqtqpppq vdyviphpvh afhsqissha tshpvapppp thlastaapi
      721 pqhlppthqp ishhipatap paqrlhphem mqrmevqrrr mmqhptglfv fcvsrraher
      781 ppphphrmhp nyghghhihv pqtmsshprq apersawelg ieagvtaaty tpgalhphla
      841 hyhapprlhh lqlgalplmv pdmagyphir yissgldgts frgpfrgnfe elihleerlg
      901 nvnrgasqgt ierctyphky kkrklhckqd geegteedte ekcticlsil eegedvrrlp
      961 cmhlfhqvcv dqwlitnkkc picrvdieaq lpses
//
LOCUS       XP_061013250             994 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase Arkadia isoform X4 [Dama dama].
ACCESSION   XP_061013250
VERSION     XP_061013250.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157267.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..994
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..994
                     /product="E3 ubiquitin-protein ligase Arkadia isoform X4"
                     /calculated_mol_wt=109061
     Region          18..292
                     /region_name="RNF111_N"
                     /note="E3 ubiquitin-protein ligase Arkadia N-terminus;
                     pfam15303"
                     /db_xref="CDD:464629"
     Region          399..>539
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          <647..>803
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     Region          930..990
                     /region_name="RING-H2_RNF111"
                     /note="RING finger, H2 subclass, found in RING finger
                     protein 111 (RNF111) and similar proteins; cd16681"
                     /db_xref="CDD:438343"
     CDS             1..994
                     /gene="RNF111"
                     /coded_by="XM_061157267.1:392..3376"
                     /db_xref="GeneID:133066314"
ORIGIN      
        1 msqwtpeynk lytlkvdmks eipsdapktq eslkgillhp epigaaksfp agveminskv
       61 gnefshlcdd sqkqekdmng nqqeqeksvv vrkkrksqqa gpsymqncak enqgilglrq
      121 hletpsdedn dssfsdclss pssslhfgds dtvtsdedke vsvrhsqail saksrthssr
      181 shkwprtete svsgllmkrp cfhssslrrl pcrkrfvknn ssqrtqkqke rilmqrkkre
      241 vlarrkyall pssssssend lssessssss tegeedlfvs tsenhqnnpt vpsgnidedv
      301 vvieasstpq itaneeinvt stdseveivt vgesyrsrst lghnrshwsq gssshtsrpq
      361 eprnrnrmst viqplrqnaa evvdltvded eptvvpttsa rmesqttsas innsnpstse
      421 qasdtasavt ssqpstvset sttltsnsmt gtstgddsrr tasnavtetg ppamprlpsc
      481 cpqhspcggs sqnhhalghp htscfqqhgh hfqhhhhhhh pphpavpvsp sfsdpacpve
      541 rppqvqppcg anstssasyh dqqalpvdls ssgirshgsa gfhgasafdp ccpvsssraa
      601 ifghqaaaaa apsqplsidg ygssmvaqpq pqppppasls scrhympppy asltrplhhq
      661 tsacphshgn pppqtqpppq vdyviphpvh afhsqissha tshpvapppp thlastaapi
      721 pqhlppthqp ishhipatap paqrlhphem mqrmevqrrr mmqhptrahe rppphphrmh
      781 pnyghghhih vpqtmsshpr qapersawel gieagvtaat ytpgalhphl ahyhapprlh
      841 hlqlgalplm vpdmagyphi ryissgldgt sfrgpfrgnf eelihleerl gnvnrgasqg
      901 tierctyphk ykkvttdwfs qrklhckqdg eegteedtee kcticlsile egedvrrlpc
      961 mhlfhqvcvd qwlitnkkcp icrvdieaql pses
//
LOCUS       XP_061013251             986 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase Arkadia isoform X5 [Dama dama].
ACCESSION   XP_061013251
VERSION     XP_061013251.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157268.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..986
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..986
                     /product="E3 ubiquitin-protein ligase Arkadia isoform X5"
                     /calculated_mol_wt=108096
     Region          18..292
                     /region_name="RNF111_N"
                     /note="E3 ubiquitin-protein ligase Arkadia N-terminus;
                     pfam15303"
                     /db_xref="CDD:464629"
     Region          399..>539
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          <647..>803
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     Region          922..982
                     /region_name="RING-H2_RNF111"
                     /note="RING finger, H2 subclass, found in RING finger
                     protein 111 (RNF111) and similar proteins; cd16681"
                     /db_xref="CDD:438343"
     CDS             1..986
                     /gene="RNF111"
                     /coded_by="XM_061157268.1:391..3351"
                     /db_xref="GeneID:133066314"
ORIGIN      
        1 msqwtpeynk lytlkvdmks eipsdapktq eslkgillhp epigaaksfp agveminskv
       61 gnefshlcdd sqkqekdmng nqqeqeksvv vrkkrksqqa gpsymqncak enqgilglrq
      121 hletpsdedn dssfsdclss pssslhfgds dtvtsdedke vsvrhsqail saksrthssr
      181 shkwprtete svsgllmkrp cfhssslrrl pcrkrfvknn ssqrtqkqke rilmqrkkre
      241 vlarrkyall pssssssend lssessssss tegeedlfvs tsenhqnnpt vpsgnidedv
      301 vvieasstpq itaneeinvt stdseveivt vgesyrsrst lghnrshwsq gssshtsrpq
      361 eprnrnrmst viqplrqnaa evvdltvded eptvvpttsa rmesqttsas innsnpstse
      421 qasdtasavt ssqpstvset sttltsnsmt gtstgddsrr tasnavtetg ppamprlpsc
      481 cpqhspcggs sqnhhalghp htscfqqhgh hfqhhhhhhh pphpavpvsp sfsdpacpve
      541 rppqvqppcg anstssasyh dqqalpvdls ssgirshgsa gfhgasafdp ccpvsssraa
      601 ifghqaaaaa apsqplsidg ygssmvaqpq pqppppasls scrhympppy asltrplhhq
      661 tsacphshgn pppqtqpppq vdyviphpvh afhsqissha tshpvapppp thlastaapi
      721 pqhlppthqp ishhipatap paqrlhphem mqrmevqrrr mmqhptrahe rppphphrmh
      781 pnyghghhih vpqtmsshpr qapersawel gieagvtaat ytpgalhphl ahyhapprlh
      841 hlqlgalplm vpdmagyphi ryissgldgt sfrgpfrgnf eelihleerl gnvnrgasqg
      901 tierctyphk ykkrklhckq dgeegteedt eekcticlsi leegedvrrl pcmhlfhqvc
      961 vdqwlitnkk cpicrvdiea qlpses
//
LOCUS       XP_061013253             985 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase Arkadia isoform X6 [Dama dama].
ACCESSION   XP_061013253
VERSION     XP_061013253.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157270.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..985
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..985
                     /product="E3 ubiquitin-protein ligase Arkadia isoform X6"
                     /calculated_mol_wt=107968
     Region          18..292
                     /region_name="RNF111_N"
                     /note="E3 ubiquitin-protein ligase Arkadia N-terminus;
                     pfam15303"
                     /db_xref="CDD:464629"
     Region          399..>539
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          <646..>802
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     Region          921..981
                     /region_name="RING-H2_RNF111"
                     /note="RING finger, H2 subclass, found in RING finger
                     protein 111 (RNF111) and similar proteins; cd16681"
                     /db_xref="CDD:438343"
     CDS             1..985
                     /gene="RNF111"
                     /coded_by="XM_061157270.1:392..3349"
                     /db_xref="GeneID:133066314"
ORIGIN      
        1 msqwtpeynk lytlkvdmks eipsdapktq eslkgillhp epigaaksfp agveminskv
       61 gnefshlcdd sqkqekdmng nqqeqeksvv vrkkrksqqa gpsymqncak enqgilglrq
      121 hletpsdedn dssfsdclss pssslhfgds dtvtsdedke vsvrhsqail saksrthssr
      181 shkwprtete svsgllmkrp cfhssslrrl pcrkrfvknn ssqrtqkqke rilmqrkkre
      241 vlarrkyall pssssssend lssessssss tegeedlfvs tsenhqnnpt vpsgnidedv
      301 vvieasstpq itaneeinvt stdseveivt vgesyrsrst lghnrshwsq gssshtsrpq
      361 eprnrnrmst viqplrqnaa evvdltvded eptvvpttsa rmesqttsas innsnpstse
      421 qasdtasavt ssqpstvset sttltsnsmt gtstgddsrr tasnavtetg ppamprlpsc
      481 cpqhspcggs sqnhhalghp htscfqqhgh hfqhhhhhhh pphpavpvsp sfsdpacpve
      541 rppqvqppcg anstssasyh dqalpvdlss sgirshgsag fhgasafdpc cpvsssraai
      601 fghqaaaaaa psqplsidgy gssmvaqpqp qppppaslss crhympppya sltrplhhqt
      661 sacphshgnp ppqtqpppqv dyviphpvha fhsqisshat shpvappppt hlastaapip
      721 qhlppthqpi shhipatapp aqrlhphemm qrmevqrrrm mqhptraher ppphphrmhp
      781 nyghghhihv pqtmsshprq apersawelg ieagvtaaty tpgalhphla hyhapprlhh
      841 lqlgalplmv pdmagyphir yissgldgts frgpfrgnfe elihleerlg nvnrgasqgt
      901 ierctyphky kkrklhckqd geegteedte ekcticlsil eegedvrrlp cmhlfhqvcv
      961 dqwlitnkkc picrvdieaq lpses
//
LOCUS       XP_061013254            1108 aa            linear   MAM 02-DEC-2023
DEFINITION  unconventional myosin-Ie [Dama dama].
ACCESSION   XP_061013254
VERSION     XP_061013254.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157271.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1108
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1108
                     /product="unconventional myosin-Ie"
                     /calculated_mol_wt=126872
     Region          33..679
                     /region_name="MYSc_Myo1"
                     /note="class I myosin, motor domain; cd01378"
                     /db_xref="CDD:276829"
     Site            order(60..63,68,112..119,159..169,388..393)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276829"
     Site            order(60..63,68)
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276829"
     Site            112..119
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276829"
     Site            159..169
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276829"
     Site            388..393
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276829"
     Site            order(417..428,431..438,440)
                     /site_type="other"
                     /note="relay loop"
                     /db_xref="CDD:276829"
     Site            611..621
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276829"
     Site            order(623..649,666..679)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276829"
     Region          719..920
                     /region_name="Myosin_TH1"
                     /note="Unconventional myosin tail, actin- and
                     lipid-binding; pfam06017"
                     /db_xref="CDD:461801"
     Region          1056..1107
                     /region_name="SH3_MyoIe_If_like"
                     /note="Src homology 3 domain of Myosins Ie, If, and
                     similar proteins; cd11827"
                     /db_xref="CDD:212761"
     Site            order(1060,1062,1065,1069,1087..1088,1101,1103..1104)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212761"
     CDS             1..1108
                     /gene="MYO1E"
                     /coded_by="XM_061157271.1:897..4223"
                     /db_xref="GeneID:133066316"
ORIGIN      
        1 mgskgayryh wqshnvkhsg vddmvllski tenaivenlk krymddyift yigsvlisvn
       61 pfkqmpyfge keiemyqgaa qyenpphiya ladnmfrnmi idrenqcvii sgesgagktv
      121 aakyimsyis rvsgggpkvq hvkdiilqsn plleafgnak tvrnnnssrf gkyfeiqfsp
      181 ggepdggkis nflleksrvv mrnpgersfh ifyqliegas peqkhglgit tmdyyyylsl
      241 sgsykvdgid dkkefqetlh amnvigifae eqalvlqiva gilhlgnisf kevgnyaave
      301 seeflafpay llginqdrlk ekltsrqmds kwggksesih vtlnveqacy trdalakalh
      361 srvfdflvds inkamekdhq eynigvldiy gfeifqkngf eqfcinfvne klqqifielt
      421 lkaeqeeyvq egirwtpidy fnnkvvcdli enkvnppgim silddvcatm havgegadqt
      481 llqklqmqig nhehfnswnq gfiihhyagk vsydmdgfce rnrdvlfmdl ielmqsselp
      541 fikslfpenl qadkkgrptt agskikkqan dlvstlmkct phyircikpn etkkpkdwee
      601 srvkhqveyl glkenirvrr agyayrrvfq kflqryailt katwpswkgd ekqgvlhllq
      661 svnmdsdqfq lgkskvfika peslflleem rerkydgyar viqkswrkfv arkkyvqmre
      721 easnlllnkk errrnsinrn figdyigmee hpelqqfvgk rekidfadtv tkydrrfksv
      781 krdllltpkc lyligrekvk qgpdkglvke vlkrriemer ilsvslstmq ddlfilheqe
      841 ydsllesvfk teflsllakr yeektqkqlp lkfsntleik lkkenwgpws aggsrqvqfh
      901 qgfgdlailk psnkvlqvsi gpglprnsrp trrntiqsrd yssrthnany pmraaplppg
      961 lhqngviknq fvpyshaagn qrsnqkslyt smarpplpqq qsigsdrvsq alesldflkv
     1021 pdqgaagarr qttsrpppag grpkpqpkpk pqvpqckaly aydaqdtdel sfnandiidi
     1081 ikedpsgwwt grlrgkqglf pnnyvtki
//
LOCUS       XP_061013255             398 aa            linear   MAM 02-DEC-2023
DEFINITION  G2/mitotic-specific cyclin-B2 [Dama dama].
ACCESSION   XP_061013255
VERSION     XP_061013255.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157272.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..398
                     /product="G2/mitotic-specific cyclin-B2"
                     /calculated_mol_wt=45044
     Region          127..259
                     /region_name="CYCLIN_SF"
                     /note="Cyclin box fold superfamily; cl40454"
                     /db_xref="CDD:477360"
     Region          264..382
                     /region_name="CYCLIN_CCNB2_rpt2"
                     /note="second cyclin box found in G2/mitotic-specific
                     cyclin-B2 (CCNB2) and similar proteins; cd20570"
                     /db_xref="CDD:410273"
     CDS             1..398
                     /gene="CCNB2"
                     /coded_by="XM_061157272.1:150..1346"
                     /db_xref="GeneID:133066317"
ORIGIN      
        1 mallrrptvs adlenndtgv nskpkshvti rravleeign rvttraiqaa kkaqntkvpv
       61 pptkttnvnk hpkptasvkp vqmdvlapkg psptpqdism keenlcqafs dallckiedi
      121 dtedwenpql csdyvkdiyq ylrqlevlqs isphfldgrd ingrmrailv dwlvqvhskf
      181 rllqetlymc vavmdrylqv qpvsrkklql vgitalllas kyeemfspni edfvyitdna
      241 ytssqireme tlilkelkfe lgrplplhfl rraskagevd veqhtlakyl meltlvdydm
      301 vhyhpskvaa aasclsqkvl gqgkwnlkqq yytgytesev levmrhmakn vvrvnenmtk
      361 ftaiknkyas skllkistip qlnskaiqel aspllgrs
//
LOCUS       XP_061013256             440 aa            linear   MAM 02-DEC-2023
DEFINITION  beta-1,3-galactosyl-O-glycosyl-glycoprotein
            beta-1,6-N-acetylglucosaminyltransferase 3 [Dama dama].
ACCESSION   XP_061013256
VERSION     XP_061013256.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157273.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..440
                     /product="beta-1,3-galactosyl-O-glycosyl-glycoprotein
                     beta-1,6-N-acetylglucosaminyltransferase 3"
                     /calculated_mol_wt=50824
     Region          136..403
                     /region_name="Branch"
                     /note="Core-2/I-Branching enzyme; pfam02485"
                     /db_xref="CDD:426795"
     CDS             1..440
                     /gene="GCNT3"
                     /coded_by="XM_061157273.1:245..1567"
                     /db_xref="GeneID:133066318"
ORIGIN      
        1 mkmtgwkkkl crghhlwalg cymllavval rlslrlkcdv dsldlesrgf qsqrcrdvly
       61 knlklpakrs incsgitrgd qeavsqalld nlevkkkrlp ftdtdylnmt rdcerfkarr
      121 kfiqfplske eldfpiaysm vvhekienfe rllravyapq niycvhvdek spetfkeavk
      181 aiiscfpnvf masklvpvvy aswsrvqadl ncmedllqss vpwkyllntc gtdfpiktna
      241 emvlalkmln gknsmeseip seykktrwky rykvtdrlyl tskmkdpppd nlpmftgnay
      301 fvasrafvqh vlenpksqrl iewakdtysp dehlwatlqr apwmpgsvpy hpkyhisdmt
      361 aiarlvkwqd hegdvsmgap yapcsgihqr aiciygagdl hwilqnhhll ankfdprvdd
      421 nvlqcleeyl rhkaiygtel
//
LOCUS       XP_061013257             355 aa            linear   MAM 02-DEC-2023
DEFINITION  BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 isoform X1
            [Dama dama].
ACCESSION   XP_061013257
VERSION     XP_061013257.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157274.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..355
                     /product="BCL2/adenovirus E1B 19 kDa protein-interacting
                     protein 2 isoform X1"
                     /calculated_mol_wt=40453
     Region          49..163
                     /region_name="BNIP2"
                     /note="Bcl2-/adenovirus E1B nineteen kDa-interacting
                     protein 2; pfam12496"
                     /db_xref="CDD:463609"
     Region          147..295
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     CDS             1..355
                     /gene="BNIP2"
                     /coded_by="XM_061157274.1:231..1298"
                     /db_xref="GeneID:133066319"
ORIGIN      
        1 megvelkeew qdedfpiplp eddsieadil avtgpesqpg slevngnkvr kklmapdisl
       61 tldpsdgsvl sddldesgei dlddldtpse dsnefewedd lpkpktteii rkgsiteyta
      121 aeekddgrrw rmfrigeqdh rvdmkaiepy kkvishggyy gdglnaivvf avcfmpesgq
      181 pnyrylmdnl fkyvigtlel lvaenymivy lngattrrkm pslgwlrkcy qqidrrlrkn
      241 lksliivhps wfirtllavt rpfisskfsq kiryvfnlae laelvpmeyv gipecikqye
      301 eeklkkkkkr vdqelngkqd epkneqfcer frvvgpplai saaagevvge vgtfe
//
LOCUS       XP_061013258             344 aa            linear   MAM 02-DEC-2023
DEFINITION  BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 isoform X2
            [Dama dama].
ACCESSION   XP_061013258
VERSION     XP_061013258.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157275.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..344
                     /product="BCL2/adenovirus E1B 19 kDa protein-interacting
                     protein 2 isoform X2"
                     /calculated_mol_wt=39313
     Region          49..163
                     /region_name="BNIP2"
                     /note="Bcl2-/adenovirus E1B nineteen kDa-interacting
                     protein 2; pfam12496"
                     /db_xref="CDD:463609"
     Region          147..295
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     CDS             1..344
                     /gene="BNIP2"
                     /coded_by="XM_061157275.1:236..1270"
                     /db_xref="GeneID:133066319"
ORIGIN      
        1 megvelkeew qdedfpiplp eddsieadil avtgpesqpg slevngnkvr kklmapdisl
       61 tldpsdgsvl sddldesgei dlddldtpse dsnefewedd lpkpktteii rkgsiteyta
      121 aeekddgrrw rmfrigeqdh rvdmkaiepy kkvishggyy gdglnaivvf avcfmpesgq
      181 pnyrylmdnl fkyvigtlel lvaenymivy lngattrrkm pslgwlrkcy qqidrrlrkn
      241 lksliivhps wfirtllavt rpfisskfsq kiryvfnlae laelvpmeyv gipecikqye
      301 eeklkkkkkr vdqelngkqd epknehlras sycgvvddaf gvsi
//
LOCUS       XP_061013259             344 aa            linear   MAM 02-DEC-2023
DEFINITION  BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 isoform X2
            [Dama dama].
ACCESSION   XP_061013259
VERSION     XP_061013259.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157276.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..344
                     /product="BCL2/adenovirus E1B 19 kDa protein-interacting
                     protein 2 isoform X2"
                     /calculated_mol_wt=39313
     Region          49..163
                     /region_name="BNIP2"
                     /note="Bcl2-/adenovirus E1B nineteen kDa-interacting
                     protein 2; pfam12496"
                     /db_xref="CDD:463609"
     Region          147..295
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     CDS             1..344
                     /gene="BNIP2"
                     /coded_by="XM_061157276.1:236..1270"
                     /db_xref="GeneID:133066319"
ORIGIN      
        1 megvelkeew qdedfpiplp eddsieadil avtgpesqpg slevngnkvr kklmapdisl
       61 tldpsdgsvl sddldesgei dlddldtpse dsnefewedd lpkpktteii rkgsiteyta
      121 aeekddgrrw rmfrigeqdh rvdmkaiepy kkvishggyy gdglnaivvf avcfmpesgq
      181 pnyrylmdnl fkyvigtlel lvaenymivy lngattrrkm pslgwlrkcy qqidrrlrkn
      241 lksliivhps wfirtllavt rpfisskfsq kiryvfnlae laelvpmeyv gipecikqye
      301 eeklkkkkkr vdqelngkqd epknehlras sycgvvddaf gvsi
//
LOCUS       XP_061013260             343 aa            linear   MAM 02-DEC-2023
DEFINITION  BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 isoform X3
            [Dama dama].
ACCESSION   XP_061013260
VERSION     XP_061013260.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157277.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..343
                     /product="BCL2/adenovirus E1B 19 kDa protein-interacting
                     protein 2 isoform X3"
                     /calculated_mol_wt=38864
     Region          49..163
                     /region_name="BNIP2"
                     /note="Bcl2-/adenovirus E1B nineteen kDa-interacting
                     protein 2; pfam12496"
                     /db_xref="CDD:463609"
     Region          147..295
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     CDS             1..343
                     /gene="BNIP2"
                     /coded_by="XM_061157277.1:230..1261"
                     /db_xref="GeneID:133066319"
ORIGIN      
        1 megvelkeew qdedfpiplp eddsieadil avtgpesqpg slevngnkvr kklmapdisl
       61 tldpsdgsvl sddldesgei dlddldtpse dsnefewedd lpkpktteii rkgsiteyta
      121 aeekddgrrw rmfrigeqdh rvdmkaiepy kkvishggyy gdglnaivvf avcfmpesgq
      181 pnyrylmdnl fkyvigtlel lvaenymivy lngattrrkm pslgwlrkcy qqidrrlrkn
      241 lksliivhps wfirtllavt rpfisskfsq kiryvfnlae laelvpmeyv gipecikqvd
      301 qelngkqdep kneqfcerfr vvgpplaisa aagevvgevg tfe
//
LOCUS       XP_061013261             332 aa            linear   MAM 02-DEC-2023
DEFINITION  BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 isoform X4
            [Dama dama].
ACCESSION   XP_061013261
VERSION     XP_061013261.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157278.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..332
                     /product="BCL2/adenovirus E1B 19 kDa protein-interacting
                     protein 2 isoform X4"
                     /calculated_mol_wt=37724
     Region          49..163
                     /region_name="BNIP2"
                     /note="Bcl2-/adenovirus E1B nineteen kDa-interacting
                     protein 2; pfam12496"
                     /db_xref="CDD:463609"
     Region          147..295
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     CDS             1..332
                     /gene="BNIP2"
                     /coded_by="XM_061157278.1:235..1233"
                     /db_xref="GeneID:133066319"
ORIGIN      
        1 megvelkeew qdedfpiplp eddsieadil avtgpesqpg slevngnkvr kklmapdisl
       61 tldpsdgsvl sddldesgei dlddldtpse dsnefewedd lpkpktteii rkgsiteyta
      121 aeekddgrrw rmfrigeqdh rvdmkaiepy kkvishggyy gdglnaivvf avcfmpesgq
      181 pnyrylmdnl fkyvigtlel lvaenymivy lngattrrkm pslgwlrkcy qqidrrlrkn
      241 lksliivhps wfirtllavt rpfisskfsq kiryvfnlae laelvpmeyv gipecikqvd
      301 qelngkqdep knehlrassy cgvvddafgv si
//
LOCUS       XP_061013262             314 aa            linear   MAM 02-DEC-2023
DEFINITION  BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 isoform X5
            [Dama dama].
ACCESSION   XP_061013262
VERSION     XP_061013262.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157279.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..314
                     /product="BCL2/adenovirus E1B 19 kDa protein-interacting
                     protein 2 isoform X5"
                     /calculated_mol_wt=35874
     Region          49..163
                     /region_name="BNIP2"
                     /note="Bcl2-/adenovirus E1B nineteen kDa-interacting
                     protein 2; pfam12496"
                     /db_xref="CDD:463609"
     Region          147..295
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     CDS             1..314
                     /gene="BNIP2"
                     /coded_by="XM_061157279.1:233..1177"
                     /db_xref="GeneID:133066319"
ORIGIN      
        1 megvelkeew qdedfpiplp eddsieadil avtgpesqpg slevngnkvr kklmapdisl
       61 tldpsdgsvl sddldesgei dlddldtpse dsnefewedd lpkpktteii rkgsiteyta
      121 aeekddgrrw rmfrigeqdh rvdmkaiepy kkvishggyy gdglnaivvf avcfmpesgq
      181 pnyrylmdnl fkyvigtlel lvaenymivy lngattrrkm pslgwlrkcy qqidrrlrkn
      241 lksliivhps wfirtllavt rpfisskfsq kiryvfnlae laelvpmeyv gipecikqvd
      301 qelngkqdep kneq
//
LOCUS       XP_061013263             109 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription initiation factor IIA subunit 2 [Dama dama].
ACCESSION   XP_061013263
VERSION     XP_061013263.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157280.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..109
                     /product="transcription initiation factor IIA subunit 2"
                     /calculated_mol_wt=12299
     Region          3..103
                     /region_name="TOA2"
                     /note="Transcription initiation factor IIA, gamma subunit
                     [Transcription]; COG5123"
                     /db_xref="CDD:227452"
     CDS             1..109
                     /gene="GTF2A2"
                     /coded_by="XM_061157280.1:70..399"
                     /db_xref="GeneID:133066321"
ORIGIN      
        1 mayqlyrntt lgnslqesld eliqsqqitp qlalqvllqf dkainaalaq rvrnrvnfrg
       61 slntyrfcdn vwtfvlndve frevtelikv dkvkivacdg kntgsstte
//
LOCUS       XP_061013265             589 aa            linear   MAM 02-DEC-2023
DEFINITION  TAF5-like RNA polymerase II p300/CBP-associated factor-associated
            factor 65 kDa subunit 5L [Dama dama].
ACCESSION   XP_061013265
VERSION     XP_061013265.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157282.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..589
                     /product="TAF5-like RNA polymerase II p300/CBP-associated
                     factor-associated factor 65 kDa subunit 5L"
                     /calculated_mol_wt=65724
     Region          67..201
                     /region_name="TAF5_NTD2"
                     /note="TAF5_NTD2 is the second conserved N-terminal region
                     of TATA Binding Protein (TBP) Associated Factor 5 (TAF5),
                     involved in forming Transcription Factor IID (TFIID);
                     cd08044"
                     /db_xref="CDD:176269"
     Site            order(90..91,133,162..166,198)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:176269"
     Site            order(132,135..136)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:176269"
     Region          <272..581
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          273..340
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          346..382
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          387..423
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          430..465
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          471..507
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          513..539
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..589
                     /gene="LOC133066322"
                     /coded_by="XM_061157282.1:1..1770"
                     /db_xref="GeneID:133066322"
ORIGIN      
        1 mkrvrteqiq mavscylkrr qygdadgplk qglrlsqste emaaslavqs esgcanivsa
       61 apcqaepqqy evqfgrlrnf ltnsdsqhsh evmpllyplf vylhlnlvqn spkstvesfy
      121 srfhgmflqn asqkdvieql qttqtiqdil snfrlrafld nkyvvrlqed synyllrylq
      181 sdnntalcrv lawhihldvq pakrtdyqly asggssrgeg gglepadvpa pilqneaale
      241 llqesikrvk dgppslttic fyafynteql lntaevspds kllaagldns ciklwslrsk
      301 klksephqvd vsrihlacdi leeeddeddn agtemkvlrg hcgpvystrf ladssgllsc
      361 sedmsirywd lgsftntvry qghaypvwdl disphslyfa sgshdrtarl wsfdrtyplr
      421 iyaghladvd cvkfhpnsny latgstdktv rlwstqqgns vrlftghrgp vlslafspng
      481 kylasagedq rlklwdlasg tlykelrght dnitsltfsp dssliasasm dnsvrvwdir
      541 sahcstpadg ssselvgvyt gqmsnvlsvq fmacnlllvt gitqesqeh
//
LOCUS       XP_061013266             339 aa            linear   MAM 02-DEC-2023
DEFINITION  annexin A2 [Dama dama].
ACCESSION   XP_061013266
VERSION     XP_061013266.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157283.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..339
                     /product="annexin A2"
                     /calculated_mol_wt=38481
     Region          37..102
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     Region          109..174
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     Region          193..259
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     Region          269..334
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     CDS             1..339
                     /gene="ANXA2"
                     /coded_by="XM_061157283.1:112..1131"
                     /db_xref="GeneID:133066323"
ORIGIN      
        1 mstvheilck lslegdhstp psaygsvkay tnfdaerdal nietaiktkg vdevtivnil
       61 tnrsneqrqd iafayqrrtk kelasalksa lsghletvil gllktpaqyd aselkasmkg
      121 lgtdedslie iicsrtnqel qeinrvykem yktdlekdiv sdtsgdfrkl mvalakgrra
      181 edgsvidyel idqdardlyd agvkrkgtdv pkwisimter svchlqkvfe ryksyspydm
      241 lesikkevkg dlenaflnlv qciqnkplyf adrlydsmkg kgtrdkvlir imvsrsevdm
      301 lkirsefkkk ygkslyyyiq qdtkgdyqka llylcggdd
//
LOCUS       XP_061013267             982 aa            linear   MAM 02-DEC-2023
DEFINITION  little elongation complex subunit 2 [Dama dama].
ACCESSION   XP_061013267
VERSION     XP_061013267.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157284.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..982
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..982
                     /product="little elongation complex subunit 2"
                     /calculated_mol_wt=109888
     Region          722..932
                     /region_name="NARG2_C"
                     /note="NMDA receptor-regulated gene protein 2 C-terminus;
                     pfam10505"
                     /db_xref="CDD:463121"
     CDS             1..982
                     /gene="ICE2"
                     /coded_by="XM_061157284.1:253..3201"
                     /db_xref="GeneID:133066324"
ORIGIN      
        1 mnsmmamgep rlnwdvspkn glktffsren ykdhsmapsl kelcilssrr igenlnasag
       61 svgneptvns aaqakekvkt tvgmvllpkp rvpyprfsrf sqreqrnyvd llvkyakvpa
      121 nsktvginkn dylqyldmkk hvneevtefl kflqnsakkc aqdynmlsdd ahlfteqilk
      181 acieqvknyp efytlhevts lmgffpfrie mgfklektll algsvkyvkt vfpsmpaklq
      241 lskdtipave tpeqiaaamh ydiskdpnae klvaryhpqi altsqslftl lnnhgpsyke
      301 qweipvciqv ipiagskpvk viyinsplpq kkmtmrernq ifhevplkfm mskntsvpvs
      361 avfmdkpeey isemdisyev necrkietre nldlefdddv teletfgatt tkpskspspt
      421 ststvptmtd tltapsiadt seaptspdis ahsrslsqil meqlqkekql vtgmidsgpe
      481 esknkddqrv ipcgekvsns dkssvqdsdl ktsdplqles smeietsnkn dmatemesvd
      541 ervnvlentd nnskektvts eaanaedvvl dssdtdedcl iidmecqnns ngktaevgsn
      601 lsskpaslns ssgqtsagnq tkstcspees cvlkkpikrv ykkfdpvgei lkmqdellkp
      661 isrkipelpl mnsenskqpp lseqpsapsd asswsksiwp safqkpkgrl pyelqdyved
      721 tseyiapqeg nfvyklfslq dllllvrcsv qrietrprsk krkkirrqfp vyvlpkveyq
      781 acygvealte selcrlwtes llhsnssfyv ghidaftskl flleeitsee lkeklsalki
      841 sslfnilqhi lrklsslqeg syllshaaed sslliyktsd gkvtrtaynl hkthcglpgv
      901 psslsvpwvp ldpslllpyh ihhgripctf ppkslgptaq qkiggtrmpt rshrnsvsve
      961 tkslpaqqve negvasskrk it
//
LOCUS       XP_061013268             982 aa            linear   MAM 02-DEC-2023
DEFINITION  little elongation complex subunit 2 [Dama dama].
ACCESSION   XP_061013268
VERSION     XP_061013268.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157285.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..982
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..982
                     /product="little elongation complex subunit 2"
                     /calculated_mol_wt=109888
     Region          722..932
                     /region_name="NARG2_C"
                     /note="NMDA receptor-regulated gene protein 2 C-terminus;
                     pfam10505"
                     /db_xref="CDD:463121"
     CDS             1..982
                     /gene="ICE2"
                     /coded_by="XM_061157285.1:199..3147"
                     /db_xref="GeneID:133066324"
ORIGIN      
        1 mnsmmamgep rlnwdvspkn glktffsren ykdhsmapsl kelcilssrr igenlnasag
       61 svgneptvns aaqakekvkt tvgmvllpkp rvpyprfsrf sqreqrnyvd llvkyakvpa
      121 nsktvginkn dylqyldmkk hvneevtefl kflqnsakkc aqdynmlsdd ahlfteqilk
      181 acieqvknyp efytlhevts lmgffpfrie mgfklektll algsvkyvkt vfpsmpaklq
      241 lskdtipave tpeqiaaamh ydiskdpnae klvaryhpqi altsqslftl lnnhgpsyke
      301 qweipvciqv ipiagskpvk viyinsplpq kkmtmrernq ifhevplkfm mskntsvpvs
      361 avfmdkpeey isemdisyev necrkietre nldlefdddv teletfgatt tkpskspspt
      421 ststvptmtd tltapsiadt seaptspdis ahsrslsqil meqlqkekql vtgmidsgpe
      481 esknkddqrv ipcgekvsns dkssvqdsdl ktsdplqles smeietsnkn dmatemesvd
      541 ervnvlentd nnskektvts eaanaedvvl dssdtdedcl iidmecqnns ngktaevgsn
      601 lsskpaslns ssgqtsagnq tkstcspees cvlkkpikrv ykkfdpvgei lkmqdellkp
      661 isrkipelpl mnsenskqpp lseqpsapsd asswsksiwp safqkpkgrl pyelqdyved
      721 tseyiapqeg nfvyklfslq dllllvrcsv qrietrprsk krkkirrqfp vyvlpkveyq
      781 acygvealte selcrlwtes llhsnssfyv ghidaftskl flleeitsee lkeklsalki
      841 sslfnilqhi lrklsslqeg syllshaaed sslliyktsd gkvtrtaynl hkthcglpgv
      901 psslsvpwvp ldpslllpyh ihhgripctf ppkslgptaq qkiggtrmpt rshrnsvsve
      961 tkslpaqqve negvasskrk it
//
LOCUS       XP_061013269             523 aa            linear   MAM 02-DEC-2023
DEFINITION  nuclear receptor ROR-alpha isoform X1 [Dama dama].
ACCESSION   XP_061013269
VERSION     XP_061013269.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157286.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..523
                     /product="nuclear receptor ROR-alpha isoform X1"
                     /calculated_mol_wt=58860
     Region          66..160
                     /region_name="NR_DBD_ROR"
                     /note="DNA-binding domain of Retinoid-related orphan
                     receptors (RORs) is composed of two C4-type zinc fingers;
                     cd06968"
                     /db_xref="CDD:143526"
     Site            order(73,76,90,93,109,115,125,128)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143526"
     Site            order(83..85,91..92,94,96,99,102,122..123,126,129,140,143)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143526"
     Region          272..511
                     /region_name="NR_LBD_ROR_like"
                     /note="The ligand binding domain of Retinoid-related
                     orphan receptors, of the nuclear receptor superfamily;
                     cd06939"
                     /db_xref="CDD:132737"
     Site            order(288..290,320,323..324,326..327,330,364,367..368,
                     370..371,379..381,391,394,403,484)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:132737"
     Site            order(339,349,352..353,356..357,505..506,509..510)
                     /site_type="other"
                     /note="coactivator recognition site [polypeptide binding]"
                     /db_xref="CDD:132737"
     CDS             1..523
                     /gene="RORA"
                     /coded_by="XM_061157286.1:1..1572"
                     /db_xref="GeneID:133066325"
ORIGIN      
        1 mesapaapdp aasepgssgs daaagsretp lnqesarkse ppapvrrqsy sstsrgisvt
       61 kkthtsqiei ipckicgdks sgihygvitc egckgffrrs qqsnatyscp rqknclidrt
      121 srnrcqhcrl qkclavgmsr davkfgrmsk kqrdslyaev qkhrmqqqqr dhqqqpgeae
      181 pltptynisa ngltelhddl snyidghtpe gskadsavss fyldiqpspd qsgldingik
      241 pepicdytpa sgffpycsft ngetsptvsm aelehlaqni skshletcqy lreelqqitw
      301 qtflqeeien yqnkqrevmw qlcaikitea iqyvvefakr idgfmelcqn dqivllkags
      361 levvfirmcr afdsqnntvy fdgkyaspdv fkslgcedfi sfvfefgksl csmhltedei
      421 alfsafvlms adrswlqekv kieklqqkiq lalqhvlqkn hredgiltkl ickvstlral
      481 cgrhteklma fkaiypdivr lhfpplykel ftsefepamq idg
//
LOCUS       XP_061013270             468 aa            linear   MAM 02-DEC-2023
DEFINITION  nuclear receptor ROR-alpha isoform X2 [Dama dama].
ACCESSION   XP_061013270
VERSION     XP_061013270.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157287.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..468
                     /product="nuclear receptor ROR-alpha isoform X2"
                     /calculated_mol_wt=53409
     Region          11..105
                     /region_name="NR_DBD_ROR"
                     /note="DNA-binding domain of Retinoid-related orphan
                     receptors (RORs) is composed of two C4-type zinc fingers;
                     cd06968"
                     /db_xref="CDD:143526"
     Site            order(18,21,35,38,54,60,70,73)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143526"
     Site            order(28..30,36..37,39,41,44,47,67..68,71,74,85,88)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143526"
     Region          217..456
                     /region_name="NR_LBD_ROR_like"
                     /note="The ligand binding domain of Retinoid-related
                     orphan receptors, of the nuclear receptor superfamily;
                     cd06939"
                     /db_xref="CDD:132737"
     Site            order(233..235,265,268..269,271..272,275,309,312..313,
                     315..316,324..326,336,339,348,429)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:132737"
     Site            order(284,294,297..298,301..302,450..451,454..455)
                     /site_type="other"
                     /note="coactivator recognition site [polypeptide binding]"
                     /db_xref="CDD:132737"
     CDS             1..468
                     /gene="RORA"
                     /coded_by="XM_061157287.1:120..1526"
                     /db_xref="GeneID:133066325"
ORIGIN      
        1 mmyfviaamk aqieiipcki cgdkssgihy gvitcegckg ffrrsqqsna tyscprqknc
       61 lidrtsrnrc qhcrlqkcla vgmsrdavkf grmskkqrds lyaevqkhrm qqqqrdhqqq
      121 pgeaepltpt ynisanglte lhddlsnyid ghtpegskad savssfyldi qpspdqsgld
      181 ingikpepic dytpasgffp ycsftngets ptvsmaeleh laqniskshl etcqylreel
      241 qqitwqtflq eeienyqnkq revmwqlcai kiteaiqyvv efakridgfm elcqndqivl
      301 lkagslevvf irmcrafdsq nntvyfdgky aspdvfkslg cedfisfvfe fgkslcsmhl
      361 tedeialfsa fvlmsadrsw lqekvkiekl qqkiqlalqh vlqknhredg iltklickvs
      421 tlralcgrht eklmafkaiy pdivrlhfpp lykelftsef epamqidg
//
LOCUS       XP_061013271            3710 aa            linear   MAM 02-DEC-2023
DEFINITION  intermembrane lipid transfer protein VPS13C [Dama dama].
ACCESSION   XP_061013271
VERSION     XP_061013271.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157288.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3710
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3710
                     /product="intermembrane lipid transfer protein VPS13C"
                     /calculated_mol_wt=417573
     Region          3..>1323
                     /region_name="MRS6"
                     /note="Vacuolar protein sorting-associated protein
                     [Intracellular trafficking and secretion]; COG5043"
                     /db_xref="CDD:227376"
     Region          <1196..>2614
                     /region_name="MRS6"
                     /note="Vacuolar protein sorting-associated protein
                     [Intracellular trafficking and secretion]; COG5043"
                     /db_xref="CDD:227376"
     Region          2721..2973
                     /region_name="SHR-BD"
                     /note="SHR-binding domain of vacuolar-sorting associated
                     protein 13; pfam06650"
                     /db_xref="CDD:461974"
     Region          <3141..3619
                     /region_name="MRS6"
                     /note="Vacuolar protein sorting-associated protein
                     [Intracellular trafficking and secretion]; COG5043"
                     /db_xref="CDD:227376"
     Region          3280..3457
                     /region_name="VPS13_C"
                     /note="Vacuolar-sorting-associated 13 protein C-terminal;
                     pfam16909"
                     /db_xref="CDD:465310"
     CDS             1..3710
                     /gene="VPS13C"
                     /coded_by="XM_061157288.1:59..11191"
                     /db_xref="GeneID:133066326"
ORIGIN      
        1 mvlesvvadl lnrflgdyve nlnksqlklg iwggnvaldn lqikenalse ldvpfkvkag
       61 qidkltlkip wknlygeavv atleglyllv vpgasikyda ekeekslqdi kqrelsriee
      121 alqkaaekdk pkeakkdtfl eklatqvikn vqvkitdihi kyeddisdpe rplsfgvtlg
      181 elslltankh wtpcilneae kiiyklirld slsaywnvnc smsyqasree ildqlkseil
      241 tsnnippnhq yifqpisasa klymnpyaet elktpkldwn ievqniaiel tkpqylsmid
      301 llesvdymvr napyrkykpy lplhtngrqw wkyaidsvle vhirrytrmw swsnikkhrq
      361 llksyksayk nkltqtkvpe etqkqiqdle ktldvfniil arqqaqvevi rsgqklkkks
      421 tdtaekrggw fsgfwgkkes kkkdeeslip etiddlmtpe ekdklftaig ysesthnltl
      481 pkqyvayiva lklvstsiti renrnipeil kvqiiglgtq vsqrpgaqal kveaklehwy
      541 itglrqqdii pslvasigdt assllkiefe tnpesstadq tlvvqsqpve viydaktina
      601 vveffqsnrg ldleqitsat lmkleeiker tatglthiie trkvldlrin lkpsylivpq
      661 tgfhheksdl lildfgtfrl nsknqglqkt snssleeimd kaydkfdvei ksvqllfara
      721 denwkecrfq hpstmhilqp mdihvelaka mvekdirmar fkvsgglplm hvrisdqkmk
      781 dvlclinsip lpqkssapsp ekqvssipii strtkgllgt pllldgiese sddeyfdaed
      841 gdiqpskstk asdvkkvpea pneelinlll kfevkevile ftkqqkeedt ilvfnvtqlg
      901 teatmrtfdl tavsylkkis ldyheiqgsk kkplhlisss dkpgldllkv eyikadkngp
      961 sfqttfekte qtfkvafssl nlllhtqall ssinylttii psdgqnmsnt kdiqvspekq
     1021 qknsalqkvi vsskdsdiih frlfaklnaf cvvvcdeknn iaeikiqgld sslslqsrkq
     1081 slfarlenii vtdvdpktvh kkavsimgne vfhfnldlyp dategdsytd mskvdgvvsl
     1141 nvgciqivyl hkflmsllnf lnnfqtakea lsaataqaae kaatsvkdfa qrsfrvsini
     1201 dlkapvivip qssistnavv vdlglirvqn qfslvsgeny adppvidrmd vqltelklsr
     1261 tviqpgishp diqllhpinl effvnrnlaa swyhkvpvve ikghlesmnv nlsqedlnll
     1321 fgilaenlge apedlnkvks riqetgeske pleistlkqg vhvsqdtsta gveeirsvdi
     1381 inmllnfevk evvitlmeka ekkgrplhel nvlqlglear ikaydltaea ylkkismrcf
     1441 eftdskggpl hiinssnvtd epllkmlltk adidgpefkt thdntkqtle vsfssldlvl
     1501 hleallsfmd flssavpsse pskkdselkp lmgesrsiia ktvsstssqd dvfdlkvtak
     1561 lnafnvfvcd qkcniadiri hgmdasvsvr pkqtdmfarl kdiivtnvdl tsihkkavsi
     1621 lgdevfrfem tlypdategk ayadmskvdg klslkvgciq ivyvhkffms llnflnnfqt
     1681 akealssata qaaeraassm kdlaeksfrl lmdinlkapv iiipqssvsp naiiadlgli
     1741 tvenrfnvvs rghhslppvi dkmdiqltql klsrtilqad lpqhdieilk pvnmllyiqr
     1801 nlaaswyvei pgmevkgrlk pmqvalsrdd ltvlmkille nlgeassqps pmqstqeavr
     1861 vrqdvssrpd hfieqedvtd sklaldqsvt lqfdfhfesl sivlynndts qesklafhnd
     1921 sfrlgelrlh lmassgkmfk dgslnvsikl ktctlddlre gieratsrmi dkkngqenns
     1981 smidisyqqg rneshidavl dklyvcasve flmtvadffi kaipqspenm tkesqiplrq
     2041 talakikmek ddslrpnmtl nakitdpevv fvanltkada paltasfqcd fflstseleq
     2101 imtasvgdlk vlacpflrek rgknittvlq pcslfmkkct qtsgkenidi kveefiikis
     2161 piilntvmti maamspktke deskdtsket enlwdlksis dcnswflgvd mgteltesfr
     2221 dvenqsieen cavvvqsvqv tlecglghrt vplllaeskf sgniknwtsl maasadmtle
     2281 vhyynethav wepliervee krpwnlslav kknpvqdktl mpgddfsalp epqtevdiss
     2341 gdtmnitisk sclnvfnnla kgfsegtast fdyslkdrap ftvtnsvgvp ikvqpnhnlr
     2401 vmgcpeksdv cdvdagqile leyatmepsr qgklsilsrq esslfsltfa phgytevtkv
     2461 piarpgrrly nvwnpntshf dslvvqidat egnkvitlrs plqiknhfsi afiiykyvkn
     2521 vkllehigia rpeeefhvpl dsyrcqlfiq pagilenqyk esttyiswke elhrskevrc
     2581 mlqcpstemn flplivntva vpdelsyisa qgedwdpayi ihlyptvtlr nflpyslryl
     2641 legtaethel tegstanvlh srisgeimel vlvkyqgknw nghfricntl pefflvcfsp
     2701 dsaetltvdl sihvrrigsq melsifspyw linktsrvlq yraedthvkh padfrdivlf
     2761 sfkkknifsk nkvqlkists swsngfsldt vgsygcvkcp annmeylvgv sikmssfnlt
     2821 rivtltpfyt ienksslele vgeiasdgal ptnkwnyias senlpfwpek fsgklcvrvv
     2881 ncegssrpff ynqqdngtll sledlnggil vdvdtaphst visfsdyheg capaliinht
     2941 pwdvltykqs gskeemvllp rqvrlfawed ptgtrklkws yaanvgehdl lkdecgqfpy
     3001 daniqihwvs fldgrqrvll ftddvalvsk arqaeemeqa nheitfslhs lglslvnnet
     3061 kqevsyigit ssgvvwemkp kqkwkpfsqk qiilleksyk kylesrdfgw iklddnfevn
     3121 fgkdpmemrl psrcsirrhf lsgiqveykq sphqrslrar lywlqvdsql pgtvfpvvfh
     3181 pvappksial dsepkpfidv svitrfneys kvlqfkyfmv liqemalkvd qgflgaital
     3241 ftpttdpeae rkwtelired sdaintelvg tsvtdtsils ffehfhispi klhlslslgs
     3301 ggeesnqekq emipihsvnl llksigatlt dvddlifkla yyeiryqfyn rdqlmwsvvr
     3361 hyseqflkqm yvlvlgldvl gnpfglirgl segfealfye pfqgavqgpe efaeglvigv
     3421 kslfghtvgg aagvvsritg svgkglaait mdkeyqqkrr eemgrqpkdf gdslarggkg
     3481 lllgvvggvt giitkpvega kkegaagffk gigkglvgav arptggiidm asstfqgiqr
     3541 vaestedvsr lrsprlihed giirpydrqe segydifenh vkklegetyr yhcaipgnkk
     3601 aslmvtnrrv lcvkeveilg hmsidwqylf edfvqsptvd gnllkisvek qglfqkkdsa
     3661 sqgyiqkiyl qdtttaerac raieegqsvr hqqklmkqss lrilrprvls
//
LOCUS       XP_061013272            2546 aa            linear   MAM 02-DEC-2023
DEFINITION  talin-2 [Dama dama].
ACCESSION   XP_061013272
VERSION     XP_061013272.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157289.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2546
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2546
                     /product="talin-2"
                     /calculated_mol_wt=271765
     Region          4..87
                     /region_name="FERM_F0_TLN2"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain, F0 sub-domain, found in Talin-2 (TLN2); cd17172"
                     /db_xref="CDD:340692"
     Region          88..199
                     /region_name="FERM_F1_TLN2"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain, F1 sub-domain, found in Talin-2 (TLN2); cd17174"
                     /db_xref="CDD:340694"
     Region          203..316
                     /region_name="FERM_M"
                     /note="FERM central domain; pfam00373"
                     /db_xref="CDD:459788"
     Region          312..403
                     /region_name="FERM_C_Talin"
                     /note="FERM domain C-lobe/F3 of Talin; cd10569"
                     /db_xref="CDD:269973"
     Site            order(320,342,344,352)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269973"
     Site            order(337,355,357..358,373..374)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:269973"
     Site            order(357..363,372,399)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269973"
     Site            392..403
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:269973"
     Region          494..659
                     /region_name="Talin_middle"
                     /note="Talin, middle domain; pfam09141"
                     /db_xref="CDD:462691"
     Region          693..>769
                     /region_name="I_LWEQ"
                     /note="I/LWEQ domain; pfam01608"
                     /db_xref="CDD:460265"
     Region          1049..>1178
                     /region_name="talin-RS"
                     /note="rod-segment of the talin C-terminal domain;
                     cd12150"
                     /db_xref="CDD:213393"
     Site            order(1064,1071..1072,1075,1078..1079,1159..1160,1163,
                     1166..1167)
                     /site_type="other"
                     /note="FERM domain interface [polypeptide binding]"
                     /db_xref="CDD:213393"
     Region          1660..1831
                     /region_name="talin-RS"
                     /note="rod-segment of the talin C-terminal domain;
                     cd12150"
                     /db_xref="CDD:213393"
     Site            order(1675,1682..1683,1686,1689..1690,1769..1770,1773,
                     1776..1777,1807,1814)
                     /site_type="other"
                     /note="FERM domain interface [polypeptide binding]"
                     /db_xref="CDD:213393"
     Region          1854..1978
                     /region_name="VBS"
                     /note="Vinculin Binding Site; pfam08913"
                     /db_xref="CDD:430312"
     Region          2341..2536
                     /region_name="ILWEQ"
                     /note="I/LWEQ domain; smart00307"
                     /db_xref="CDD:214607"
     CDS             1..2546
                     /gene="TLN2"
                     /coded_by="XM_061157289.1:242..7882"
                     /db_xref="GeneID:133066328"
ORIGIN      
        1 mvalslkicv rhcnvvktmq fepstavyda crvirervpe aqtgqasdyg lflsdedprk
       61 giwleagrtl dyymlrngdi leykkkqrpq kirmldgsvk tvmvddsktv gellvticsr
      121 igitnyeeys liqetieekk eegtgtlkkd rtllrderkm eklkaklhtd ddlnwldhsr
      181 tfreqgvden etlllrrkff ysdqnvdsrd pvqlnllyvq arddilngsh pvsfekacef
      241 ggfqaqiqfg phvehkhkpg fldlkeflpk eyikqrgaek rifqehkncg emseieakvk
      301 yvklarslrt ygvsfflvke kmkgknklvp rllgitkdsv mrvdektkev lqewplttvk
      361 rwaaspksft ldfgeyqesy ysvqttegeq isqliagyid iilkkkqskd rfglegdees
      421 tmleesvspk kstilqqqfn rtgkvehgsv alpavmrsgs sgpetfnvgs mpspqqqvmv
      481 gqmhrghmpp ltsaqqalmg tintsmhavq qaqddlseld slpplgqdma srvwvqnkvd
      541 eskheihsqv daitagtasv vnltagdpad tdytavgcai ttissnltem skgvkllaal
      601 mddevgsged llraartlag avsdllkavq ptsgevsfap rqtvltaags igqasgdllr
      661 qigenetder fqdvlmslak avanaaamlv lkaknvaqva edtvlqnrvi aaatqcalst
      721 sqlvacakvv sptisspvcq eqlieagklv drsvencvra cqaatddael lkqvsaaasv
      781 vsqalhdllq hvrqfasrge pigrydqatd timcvtesif ssmgdagemv rqarvlaqat
      841 sdlvnamrsd aeaeidmens kkllaaakll adstarmvea akgaaanpen edqqqrlrea
      901 aeglrvatna aaqnaikkki vnrlevaakq aaaaatqtia asqnaavsnk npaaqqqlvq
      961 sckavadhip qlvqgvrgsq aqaedlsaql aliissqnfl qpgskmvssa kaavptvsdq
     1021 aaamqlsqca knlatslael rtasqkahea cgpmeidsal stvqtlksel qdakmaaves
     1081 qlkplpgetl ekcaqdlgst skavgssmaq lltcaaqgne hytgvaaret aqalktlaqa
     1141 argvaastsd paaahamlds ardvmegsam liqeakqali apgdaesqqr laqvakavsh
     1201 slnncvnclp gqkdvdvalk sigesskkll vdslppstkp fqeaqselnq aaadlnqsag
     1261 evvhatrgqs gelaaasgkf sddfdeflda giemagqaqt kedqiqvign lknismassk
     1321 lllaakslsv dpgapnaknl laaaaravte sinqlitlct qqapgqkecd nalreletvk
     1381 gmldnpnepv sdlsyfdcie svmenskvlg esmagisqna ktgdlpafge cvgiaskalc
     1441 glteaaaqaa ylvgisdpns qaghqglvdp iqfaranqai qmacqnlvdp gsspsqvlsa
     1501 ativakhtsa lcnacriass ktgnpvakrh fvqsakevan stanlvktik aldgdfsedn
     1561 rnkcriatap lieavenlta fasnpefvsi paqissegsq aqepilvsak tmlessshli
     1621 rtarslainp kdpptwsvla ghshtvsdsi kslitsirdk apgqrecdfs idsinrcird
     1681 ieqaslaavs qslatrddis vealqeqlts vvqeighlid piataargea aqlghkvtql
     1741 asyfeplila avgvaskild hqqqmtvldq tktlaesalq mlyaakeggg npkaqhthda
     1801 iteaaqlmke avddimvtln eaasevglvg gmvdaiaeam skldegtppe pkgtfvdyqt
     1861 tvvkyskaia vtaqemmtks vtnpeelggl asqmtsdygh lalqgqlaaa taepeeigfq
     1921 irtrvqdlgh gciflvqkag alqvcptdsy tkreliecar avtekvslvl salqagnkgt
     1981 qacitaatav sgiiadldtt imfatagtln aennetfadh renilktaka lvedtkllvs
     2041 gaastpdkla qaaqssaati tqlaevvklg aaslgsddpe tqvvlinaik dvakalsdli
     2101 gatkgaaskp addpsmyqlk gaakvmvtnv tsllktvkav edeatrgtra leatieymkq
     2161 eltvfqskev pektsspees irmtkgitma takavaagns crqedviata nlsrkavsdm
     2221 ltackqasfh pdvseevrtr alrygtectl gyldllehvl vilqkptpel khqlaafskr
     2281 vagavteliq aaeamkgtew vdpedptvia etellgaaas ieaaakkleq lkprakpkqa
     2341 detldfeeqi leaaksiaaa tsalvksasa aqrelvaqgk vgsipanaad dgqwsqglis
     2401 aarmvaaats slceaanasv qghaseekli ssakqvaast aqllvackvk adqdseamrr
     2461 lqaagnavkr asdnlvraaq kaafgkaddd dvvvktkfvg giaqiiaaqe emlkkerele
     2521 earkklaqir qqqykflpte lredeg
//
LOCUS       XP_061013273             284 aa            linear   MAM 02-DEC-2023
DEFINITION  tropomyosin alpha-1 chain isoform X1 [Dama dama].
ACCESSION   XP_061013273
VERSION     XP_061013273.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157290.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..284
                     /product="tropomyosin alpha-1 chain isoform X1"
                     /calculated_mol_wt=32504
     Region          48..282
                     /region_name="Tropomyosin"
                     /note="pfam00261"
                     /db_xref="CDD:459736"
     CDS             1..284
                     /gene="TPM1"
                     /coded_by="XM_061157290.1:88..942"
                     /db_xref="GeneID:133066329"
ORIGIN      
        1 mdaikkkmqm lkldkenald raeqaeadkk aaedrskqle ediaakekll rvsederdrv
       61 leelhkaeds llaadeaaak aeadvaslnr riqlveeeld raqerlatal qkleeaekaa
      121 desergmkvi esraqkdeek meiqeiqlke akhiaedadr kyeevarklv iiesdlerae
      181 eraelsegkc aeleeelktv tnnlksleaq aekysqkedk yeeeikvlsd klkeaetrae
      241 faersvtkle ksiddleekv ahakeenlsm hqmldqtlle lnnm
//
LOCUS       XP_061013274             284 aa            linear   MAM 02-DEC-2023
DEFINITION  tropomyosin alpha-1 chain isoform X2 [Dama dama].
ACCESSION   XP_061013274
VERSION     XP_061013274.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157291.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..284
                     /product="tropomyosin alpha-1 chain isoform X2"
                     /calculated_mol_wt=32592
     Region          48..282
                     /region_name="Tropomyosin"
                     /note="pfam00261"
                     /db_xref="CDD:459736"
     CDS             1..284
                     /gene="TPM1"
                     /coded_by="XM_061157291.1:89..943"
                     /db_xref="GeneID:133066329"
ORIGIN      
        1 mdaikkkmqm lkldkenald raeqaeadkk aaedrskqle delvslqkkl katedeldky
       61 sealkdaqek lelaekkatd aeadvaslnr riqlveeeld raqerlatal qkleeaekaa
      121 desergmkvi esraqkdeek meiqeiqlke akhiaedadr kyeevarklv iiesdlerae
      181 eraelsegkc aeleeelktv tnnlksleaq aekysqkedk yeeeikvlsd klkeaetrae
      241 faersvtkle ksiddleekv ahakeenlsm hqmldqtlle lnnm
//
LOCUS       XP_061013275             284 aa            linear   MAM 02-DEC-2023
DEFINITION  tropomyosin alpha-1 chain isoform X3 [Dama dama].
ACCESSION   XP_061013275
VERSION     XP_061013275.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157292.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..284
                     /product="tropomyosin alpha-1 chain isoform X3"
                     /calculated_mol_wt=32494
     Region          48..282
                     /region_name="Tropomyosin"
                     /note="pfam00261"
                     /db_xref="CDD:459736"
     CDS             1..284
                     /gene="TPM1"
                     /coded_by="XM_061157292.1:95..949"
                     /db_xref="GeneID:133066329"
ORIGIN      
        1 mdaikkkmqm lkldkenald raeqaeadkk aaedrskqle ediaakekll rvsederdrv
       61 leelhkaeds llaadeaaak aeadvaslnr riqlveeeld raqerlatal qkleeaekaa
      121 desergmkvi esraqkdeek meiqeiqlke akhiaedadr kyeevarklv iiesdlerae
      181 eraelsegkc aeleeelktv tnnlksleaq aekysqkedk yeeeikvlsd klkeaetrae
      241 faersvtkle ksiddledel yaqklkykai seeldhalnd mtsm
//
LOCUS       XP_061013276             284 aa            linear   MAM 02-DEC-2023
DEFINITION  tropomyosin alpha-1 chain isoform X4 [Dama dama].
ACCESSION   XP_061013276
VERSION     XP_061013276.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157293.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..284
                     /product="tropomyosin alpha-1 chain isoform X4"
                     /calculated_mol_wt=32582
     Region          48..282
                     /region_name="Tropomyosin"
                     /note="pfam00261"
                     /db_xref="CDD:459736"
     CDS             1..284
                     /gene="TPM1"
                     /coded_by="XM_061157293.1:96..950"
                     /db_xref="GeneID:133066329"
ORIGIN      
        1 mdaikkkmqm lkldkenald raeqaeadkk aaedrskqle delvslqkkl katedeldky
       61 sealkdaqek lelaekkatd aeadvaslnr riqlveeeld raqerlatal qkleeaekaa
      121 desergmkvi esraqkdeek meiqeiqlke akhiaedadr kyeevarklv iiesdlerae
      181 eraelsegkc aeleeelktv tnnlksleaq aekysqkedk yeeeikvlsd klkeaetrae
      241 faersvtkle ksiddledel yaqklkykai seeldhalnd mtsm
//
LOCUS       XP_061013277             284 aa            linear   MAM 02-DEC-2023
DEFINITION  tropomyosin alpha-1 chain isoform X5 [Dama dama].
ACCESSION   XP_061013277
VERSION     XP_061013277.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157294.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..284
                     /product="tropomyosin alpha-1 chain isoform X5"
                     /calculated_mol_wt=32644
     Region          48..282
                     /region_name="Tropomyosin"
                     /note="pfam00261"
                     /db_xref="CDD:459736"
     CDS             1..284
                     /gene="TPM1"
                     /coded_by="XM_061157294.1:93..947"
                     /db_xref="GeneID:133066329"
ORIGIN      
        1 mdaikkkmqm lkldkenald raeqaeadkk aaedrskqle ediaakekll rvsederdrv
       61 leelhkaeds llaadeaaak aeadvaslnr riqlveeeld raqerlatal qkleeaekaa
      121 desergmkvi esraqkdeek meiqeiqlke akhiaedadr kyeevarklv iiesdlerae
      181 eraelsegqv rqleeqlrim dqtlkalmaa edkysqkedk yeeeikvlsd klkeaetrae
      241 faersvtkle ksiddleekv ahakeenlsm hqmldqtlle lnnm
//
LOCUS       XP_061013278             284 aa            linear   MAM 02-DEC-2023
DEFINITION  tropomyosin alpha-1 chain isoform X6 [Dama dama].
ACCESSION   XP_061013278
VERSION     XP_061013278.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157295.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..284
                     /product="tropomyosin alpha-1 chain isoform X6"
                     /calculated_mol_wt=32731
     Region          48..282
                     /region_name="Tropomyosin"
                     /note="pfam00261"
                     /db_xref="CDD:459736"
     CDS             1..284
                     /gene="TPM1"
                     /coded_by="XM_061157295.1:94..948"
                     /db_xref="GeneID:133066329"
ORIGIN      
        1 mdaikkkmqm lkldkenald raeqaeadkk aaedrskqle delvslqkkl katedeldky
       61 sealkdaqek lelaekkatd aeadvaslnr riqlveeeld raqerlatal qkleeaekaa
      121 desergmkvi esraqkdeek meiqeiqlke akhiaedadr kyeevarklv iiesdlerae
      181 eraelsegqv rqleeqlrim dqtlkalmaa edkysqkedk yeeeikvlsd klkeaetrae
      241 faersvtkle ksiddleekv ahakeenlsm hqmldqtlle lnnm
//
LOCUS       XP_061013279             284 aa            linear   MAM 02-DEC-2023
DEFINITION  tropomyosin alpha-1 chain isoform X7 [Dama dama].
ACCESSION   XP_061013279
VERSION     XP_061013279.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157296.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..284
                     /product="tropomyosin alpha-1 chain isoform X7"
                     /calculated_mol_wt=32634
     Region          48..282
                     /region_name="Tropomyosin"
                     /note="pfam00261"
                     /db_xref="CDD:459736"
     CDS             1..284
                     /gene="TPM1"
                     /coded_by="XM_061157296.1:102..956"
                     /db_xref="GeneID:133066329"
ORIGIN      
        1 mdaikkkmqm lkldkenald raeqaeadkk aaedrskqle ediaakekll rvsederdrv
       61 leelhkaeds llaadeaaak aeadvaslnr riqlveeeld raqerlatal qkleeaekaa
      121 desergmkvi esraqkdeek meiqeiqlke akhiaedadr kyeevarklv iiesdlerae
      181 eraelsegqv rqleeqlrim dqtlkalmaa edkysqkedk yeeeikvlsd klkeaetrae
      241 faersvtkle ksiddledel yaqklkykai seeldhalnd mtsm
//
LOCUS       XP_061013280             284 aa            linear   MAM 02-DEC-2023
DEFINITION  tropomyosin alpha-1 chain isoform X8 [Dama dama].
ACCESSION   XP_061013280
VERSION     XP_061013280.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157297.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..284
                     /product="tropomyosin alpha-1 chain isoform X8"
                     /calculated_mol_wt=32721
     Region          48..282
                     /region_name="Tropomyosin"
                     /note="pfam00261"
                     /db_xref="CDD:459736"
     CDS             1..284
                     /gene="TPM1"
                     /coded_by="XM_061157297.1:108..962"
                     /db_xref="GeneID:133066329"
ORIGIN      
        1 mdaikkkmqm lkldkenald raeqaeadkk aaedrskqle delvslqkkl katedeldky
       61 sealkdaqek lelaekkatd aeadvaslnr riqlveeeld raqerlatal qkleeaekaa
      121 desergmkvi esraqkdeek meiqeiqlke akhiaedadr kyeevarklv iiesdlerae
      181 eraelsegqv rqleeqlrim dqtlkalmaa edkysqkedk yeeeikvlsd klkeaetrae
      241 faersvtkle ksiddledel yaqklkykai seeldhalnd mtsm
//
LOCUS       XP_061013281             284 aa            linear   MAM 02-DEC-2023
DEFINITION  tropomyosin alpha-1 chain isoform X9 [Dama dama].
ACCESSION   XP_061013281
VERSION     XP_061013281.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157298.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..284
                     /product="tropomyosin alpha-1 chain isoform X9"
                     /calculated_mol_wt=32476
     Region          48..282
                     /region_name="Tropomyosin"
                     /note="pfam00261"
                     /db_xref="CDD:459736"
     CDS             1..284
                     /gene="TPM1"
                     /coded_by="XM_061157298.1:95..949"
                     /db_xref="GeneID:133066329"
ORIGIN      
        1 mdaikkkmqm lkldkenald raeqaeadkk aaedrskqle ediaakekll rvsederdrv
       61 leelhkaeds llaadeaaak aeadvaslnr riqlveeeld raqerlatal qkleeaekaa
      121 desergmkvi esraqkdeek meiqeiqlke akhiaedadr kyeevarklv iiesdlerae
      181 eraelsegkc aeleeelktv tnnlksleaq aekysqkedk yeeeikvlsd klkeaetrae
      241 faersvtkle ksiddledel yaqklkykai seeldhalnd mtsi
//
LOCUS       XP_061013282             248 aa            linear   MAM 02-DEC-2023
DEFINITION  tropomyosin alpha-1 chain isoform X10 [Dama dama].
ACCESSION   XP_061013282
VERSION     XP_061013282.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157299.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..248
                     /product="tropomyosin alpha-1 chain isoform X10"
                     /calculated_mol_wt=28461
     Region          12..246
                     /region_name="Tropomyosin"
                     /note="pfam00261"
                     /db_xref="CDD:459736"
     CDS             1..248
                     /gene="TPM1"
                     /coded_by="XM_061157299.1:16..762"
                     /db_xref="GeneID:133066329"
ORIGIN      
        1 magsssleav rrkirslqeq adaaeerags lqreldyerk lretaeadva slnrriqlve
       61 eeldraqerl atalqkleea ekaadeserg mkviesraqk deekmeiqei qlkeakhiae
      121 dadrkyeeva rklviiesdl eraeeraels egkcaeleee lktvtnnlks leaqaekysq
      181 kedkyeeeik vlsdklkeae traefaersv tkleksiddl eekvahakee nlsmhqmldq
      241 tllelnnm
//
LOCUS       XP_061013283             248 aa            linear   MAM 02-DEC-2023
DEFINITION  tropomyosin alpha-1 chain isoform X11 [Dama dama].
ACCESSION   XP_061013283
VERSION     XP_061013283.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157300.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..248
                     /product="tropomyosin alpha-1 chain isoform X11"
                     /calculated_mol_wt=28451
     Region          12..246
                     /region_name="Tropomyosin"
                     /note="pfam00261"
                     /db_xref="CDD:459736"
     CDS             1..248
                     /gene="TPM1"
                     /coded_by="XM_061157300.1:16..762"
                     /db_xref="GeneID:133066329"
ORIGIN      
        1 magsssleav rrkirslqeq adaaeerags lqreldyerk lretaeadva slnrriqlve
       61 eeldraqerl atalqkleea ekaadeserg mkviesraqk deekmeiqei qlkeakhiae
      121 dadrkyeeva rklviiesdl eraeeraels egkcaeleee lktvtnnlks leaqaekysq
      181 kedkyeeeik vlsdklkeae traefaersv tkleksiddl edelyaqklk ykaiseeldh
      241 alndmtsm
//
LOCUS       XP_061013284             248 aa            linear   MAM 02-DEC-2023
DEFINITION  tropomyosin alpha-1 chain isoform X12 [Dama dama].
ACCESSION   XP_061013284
VERSION     XP_061013284.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157301.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..248
                     /product="tropomyosin alpha-1 chain isoform X12"
                     /calculated_mol_wt=28600
     Region          12..246
                     /region_name="Tropomyosin"
                     /note="pfam00261"
                     /db_xref="CDD:459736"
     CDS             1..248
                     /gene="TPM1"
                     /coded_by="XM_061157301.1:16..762"
                     /db_xref="GeneID:133066329"
ORIGIN      
        1 magsssleav rrkirslqeq adaaeerags lqreldyerk lretaeadva slnrriqlve
       61 eeldraqerl atalqkleea ekaadeserg mkviesraqk deekmeiqei qlkeakhiae
      121 dadrkyeeva rklviiesdl eraeeraels egqvrqleeq lrimdqtlka lmaaedkysq
      181 kedkyeeeik vlsdklkeae traefaersv tkleksiddl eekvahakee nlsmhqmldq
      241 tllelnnm
//
LOCUS       XP_061013285             248 aa            linear   MAM 02-DEC-2023
DEFINITION  tropomyosin alpha-1 chain isoform X13 [Dama dama].
ACCESSION   XP_061013285
VERSION     XP_061013285.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157302.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..248
                     /product="tropomyosin alpha-1 chain isoform X13"
                     /calculated_mol_wt=28590
     Region          12..246
                     /region_name="Tropomyosin"
                     /note="pfam00261"
                     /db_xref="CDD:459736"
     CDS             1..248
                     /gene="TPM1"
                     /coded_by="XM_061157302.1:23..769"
                     /db_xref="GeneID:133066329"
ORIGIN      
        1 magsssleav rrkirslqeq adaaeerags lqreldyerk lretaeadva slnrriqlve
       61 eeldraqerl atalqkleea ekaadeserg mkviesraqk deekmeiqei qlkeakhiae
      121 dadrkyeeva rklviiesdl eraeeraels egqvrqleeq lrimdqtlka lmaaedkysq
      181 kedkyeeeik vlsdklkeae traefaersv tkleksiddl edelyaqklk ykaiseeldh
      241 alndmtsm
//
LOCUS       XP_061013286             326 aa            linear   MAM 02-DEC-2023
DEFINITION  tropomyosin alpha-1 chain isoform X14 [Dama dama].
ACCESSION   XP_061013286
VERSION     XP_061013286.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157303.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..326
                     /product="tropomyosin alpha-1 chain isoform X14"
                     /calculated_mol_wt=37294
     Region          2..>159
                     /region_name="EmrA"
                     /note="Multidrug resistance efflux pump EmrA [Defense
                     mechanisms]; COG1566"
                     /db_xref="CDD:441174"
     Region          90..324
                     /region_name="Tropomyosin"
                     /note="pfam00261"
                     /db_xref="CDD:459736"
     CDS             1..326
                     /gene="TPM1"
                     /coded_by="XM_061157303.1:91..1071"
                     /db_xref="GeneID:133066329"
ORIGIN      
        1 mdaikkkmqm lkldkenald raeqaeadkk aaedrskqle ediaakekll rvsederdrv
       61 leelhkaeds llaadeaaak ledelvslqk klkatedeld kysealkdaq eklelaekka
      121 tdaeadvasl nrriqlveee ldraqerlat alqkleeaek aadesergmk viesraqkde
      181 ekmeiqeiql keakhiaeda drkyeevark lviiesdler aeeraelseg kcaeleeelk
      241 tvtnnlksle aqaekysqke dkyeeeikvl sdklkeaetr aefaersvtk leksiddlee
      301 kvahakeenl smhqmldqtl lelnnm
//
LOCUS       XP_061013287             326 aa            linear   MAM 02-DEC-2023
DEFINITION  tropomyosin alpha-1 chain isoform X15 [Dama dama].
ACCESSION   XP_061013287
VERSION     XP_061013287.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157304.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..326
                     /product="tropomyosin alpha-1 chain isoform X15"
                     /calculated_mol_wt=37423
     Region          2..>159
                     /region_name="EmrA"
                     /note="Multidrug resistance efflux pump EmrA [Defense
                     mechanisms]; COG1566"
                     /db_xref="CDD:441174"
     Region          90..324
                     /region_name="Tropomyosin"
                     /note="pfam00261"
                     /db_xref="CDD:459736"
     CDS             1..326
                     /gene="TPM1"
                     /coded_by="XM_061157304.1:107..1087"
                     /db_xref="GeneID:133066329"
ORIGIN      
        1 mdaikkkmqm lkldkenald raeqaeadkk aaedrskqle ediaakekll rvsederdrv
       61 leelhkaeds llaadeaaak ledelvslqk klkatedeld kysealkdaq eklelaekka
      121 tdaeadvasl nrriqlveee ldraqerlat alqkleeaek aadesergmk viesraqkde
      181 ekmeiqeiql keakhiaeda drkyeevark lviiesdler aeeraelseg qvrqleeqlr
      241 imdqtlkalm aaedkysqke dkyeeeikvl sdklkeaetr aefaersvtk leksiddled
      301 elyaqklkyk aiseeldhal ndmtsm
//
LOCUS       XP_061013288             326 aa            linear   MAM 02-DEC-2023
DEFINITION  tropomyosin alpha-1 chain isoform X16 [Dama dama].
ACCESSION   XP_061013288
VERSION     XP_061013288.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157305.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..326
                     /product="tropomyosin alpha-1 chain isoform X16"
                     /calculated_mol_wt=37284
     Region          2..>159
                     /region_name="EmrA"
                     /note="Multidrug resistance efflux pump EmrA [Defense
                     mechanisms]; COG1566"
                     /db_xref="CDD:441174"
     Region          90..324
                     /region_name="Tropomyosin"
                     /note="pfam00261"
                     /db_xref="CDD:459736"
     CDS             1..326
                     /gene="TPM1"
                     /coded_by="XM_061157305.1:96..1076"
                     /db_xref="GeneID:133066329"
ORIGIN      
        1 mdaikkkmqm lkldkenald raeqaeadkk aaedrskqle ediaakekll rvsederdrv
       61 leelhkaeds llaadeaaak ledelvslqk klkatedeld kysealkdaq eklelaekka
      121 tdaeadvasl nrriqlveee ldraqerlat alqkleeaek aadesergmk viesraqkde
      181 ekmeiqeiql keakhiaeda drkyeevark lviiesdler aeeraelseg kcaeleeelk
      241 tvtnnlksle aqaekysqke dkyeeeikvl sdklkeaetr aefaersvtk leksiddled
      301 elyaqklkyk aiseeldhal ndmtsm
//
LOCUS       XP_061013289             245 aa            linear   MAM 02-DEC-2023
DEFINITION  tropomyosin alpha-1 chain isoform X17 [Dama dama].
ACCESSION   XP_061013289
VERSION     XP_061013289.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157306.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..245
                     /product="tropomyosin alpha-1 chain isoform X17"
                     /calculated_mol_wt=28237
     Region          12..244
                     /region_name="Tropomyosin"
                     /note="pfam00261"
                     /db_xref="CDD:459736"
     CDS             1..245
                     /gene="TPM1"
                     /coded_by="XM_061157306.1:16..753"
                     /db_xref="GeneID:133066329"
ORIGIN      
        1 magsssleav rrkirslqeq adaaeerags lqreldyerk lretaeadva slnrriqlve
       61 eeldraqerl atalqkleea ekaadeserg mkviesraqk deekmeiqei qlkeakhiae
      121 dadrkyeeva rklviiesdl eraeeraels egkcaeleee lktvtnnlks leaqaekysq
      181 kedkyeeeik vlsdklkeae traefaersv tkleksiddl edqlyqqleq nrrltnqlkl
      241 alned
//
LOCUS       XP_061013291             281 aa            linear   MAM 02-DEC-2023
DEFINITION  tropomyosin alpha-1 chain isoform X18 [Dama dama].
ACCESSION   XP_061013291
VERSION     XP_061013291.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157308.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..281
                     /product="tropomyosin alpha-1 chain isoform X18"
                     /calculated_mol_wt=32368
     Region          48..280
                     /region_name="Tropomyosin"
                     /note="pfam00261"
                     /db_xref="CDD:459736"
     CDS             1..281
                     /gene="TPM1"
                     /coded_by="XM_061157308.1:95..940"
                     /db_xref="GeneID:133066329"
ORIGIN      
        1 mdaikkkmqm lkldkenald raeqaeadkk aaedrskqle delvslqkkl katedeldky
       61 sealkdaqek lelaekkatd aeadvaslnr riqlveeeld raqerlatal qkleeaekaa
      121 desergmkvi esraqkdeek meiqeiqlke akhiaedadr kyeevarklv iiesdlerae
      181 eraelsegkc aeleeelktv tnnlksleaq aekysqkedk yeeeikvlsd klkeaetrae
      241 faersvtkle ksiddledql yqqleqnrrl tnqlklalne d
//
LOCUS       XP_061013292             281 aa            linear   MAM 02-DEC-2023
DEFINITION  tropomyosin alpha-1 chain isoform X19 [Dama dama].
ACCESSION   XP_061013292
VERSION     XP_061013292.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157309.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..281
                     /product="tropomyosin alpha-1 chain isoform X19"
                     /calculated_mol_wt=32420
     Region          48..280
                     /region_name="Tropomyosin"
                     /note="pfam00261"
                     /db_xref="CDD:459736"
     CDS             1..281
                     /gene="TPM1"
                     /coded_by="XM_061157309.1:100..945"
                     /db_xref="GeneID:133066329"
ORIGIN      
        1 mdaikkkmqm lkldkenald raeqaeadkk aaedrskqle ediaakekll rvsederdrv
       61 leelhkaeds llaadeaaak aeadvaslnr riqlveeeld raqerlatal qkleeaekaa
      121 desergmkvi esraqkdeek meiqeiqlke akhiaedadr kyeevarklv iiesdlerae
      181 eraelsegqv rqleeqlrim dqtlkalmaa edkysqkedk yeeeikvlsd klkeaetrae
      241 faersvtkle ksiddledql yqqleqnrrl tnqlklalne d
//
LOCUS       XP_061013293             281 aa            linear   MAM 02-DEC-2023
DEFINITION  tropomyosin alpha-1 chain isoform X20 [Dama dama].
ACCESSION   XP_061013293
VERSION     XP_061013293.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157310.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..281
                     /product="tropomyosin alpha-1 chain isoform X20"
                     /calculated_mol_wt=32508
     Region          48..280
                     /region_name="Tropomyosin"
                     /note="pfam00261"
                     /db_xref="CDD:459736"
     CDS             1..281
                     /gene="TPM1"
                     /coded_by="XM_061157310.1:105..950"
                     /db_xref="GeneID:133066329"
ORIGIN      
        1 mdaikkkmqm lkldkenald raeqaeadkk aaedrskqle delvslqkkl katedeldky
       61 sealkdaqek lelaekkatd aeadvaslnr riqlveeeld raqerlatal qkleeaekaa
      121 desergmkvi esraqkdeek meiqeiqlke akhiaedadr kyeevarklv iiesdlerae
      181 eraelsegqv rqleeqlrim dqtlkalmaa edkysqkedk yeeeikvlsd klkeaetrae
      241 faersvtkle ksiddledql yqqleqnrrl tnqlklalne d
//
LOCUS       XP_061013294             298 aa            linear   MAM 02-DEC-2023
DEFINITION  tropomyosin alpha-1 chain isoform X21 [Dama dama].
ACCESSION   XP_061013294
VERSION     XP_061013294.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157311.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..298
                     /product="tropomyosin alpha-1 chain isoform X21"
                     /calculated_mol_wt=34048
     Region          48..259
                     /region_name="Tropomyosin"
                     /note="pfam00261"
                     /db_xref="CDD:459736"
     CDS             1..298
                     /gene="TPM1"
                     /coded_by="XM_061157311.1:96..992"
                     /db_xref="GeneID:133066329"
ORIGIN      
        1 mdaikkkmqm lkldkenald raeqaeadkk aaedrskqle delvslqkkl katedeldky
       61 sealkdaqek lelaekkatd aeadvaslnr riqlveeeld raqerlatal qkleeaekaa
      121 desergmkvi esraqkdeek meiqeiqlke akhiaedadr kyeevarklv iiesdlerae
      181 eraelsegkc aeleeelktv tnnlksleaq aekysqkedk yeeeikvlsd klkeaetrae
      241 faersvtkle ksiddledky lcftspktps sswmshlsel cslsvlqltl ilsfhilp
//
LOCUS       XP_061013295             298 aa            linear   MAM 02-DEC-2023
DEFINITION  tropomyosin alpha-1 chain isoform X22 [Dama dama].
ACCESSION   XP_061013295
VERSION     XP_061013295.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157312.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..298
                     /product="tropomyosin alpha-1 chain isoform X22"
                     /calculated_mol_wt=34188
     Region          48..259
                     /region_name="Tropomyosin"
                     /note="pfam00261"
                     /db_xref="CDD:459736"
     CDS             1..298
                     /gene="TPM1"
                     /coded_by="XM_061157312.1:107..1003"
                     /db_xref="GeneID:133066329"
ORIGIN      
        1 mdaikkkmqm lkldkenald raeqaeadkk aaedrskqle delvslqkkl katedeldky
       61 sealkdaqek lelaekkatd aeadvaslnr riqlveeeld raqerlatal qkleeaekaa
      121 desergmkvi esraqkdeek meiqeiqlke akhiaedadr kyeevarklv iiesdlerae
      181 eraelsegqv rqleeqlrim dqtlkalmaa edkysqkedk yeeeikvlsd klkeaetrae
      241 faersvtkle ksiddledky lcftspktps sswmshlsel cslsvlqltl ilsfhilp
//
LOCUS       XP_061013296             245 aa            linear   MAM 02-DEC-2023
DEFINITION  tropomyosin alpha-1 chain isoform X23 [Dama dama].
ACCESSION   XP_061013296
VERSION     XP_061013296.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157313.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..245
                     /product="tropomyosin alpha-1 chain isoform X23"
                     /calculated_mol_wt=28377
     Region          12..244
                     /region_name="Tropomyosin"
                     /note="pfam00261"
                     /db_xref="CDD:459736"
     CDS             1..245
                     /gene="TPM1"
                     /coded_by="XM_061157313.1:23..760"
                     /db_xref="GeneID:133066329"
ORIGIN      
        1 magsssleav rrkirslqeq adaaeerags lqreldyerk lretaeadva slnrriqlve
       61 eeldraqerl atalqkleea ekaadeserg mkviesraqk deekmeiqei qlkeakhiae
      121 dadrkyeeva rklviiesdl eraeeraels egqvrqleeq lrimdqtlka lmaaedkysq
      181 kedkyeeeik vlsdklkeae traefaersv tkleksiddl edqlyqqleq nrrltnqlkl
      241 alned
//
LOCUS       XP_061013297             262 aa            linear   MAM 02-DEC-2023
DEFINITION  tropomyosin alpha-1 chain isoform X24 [Dama dama].
ACCESSION   XP_061013297
VERSION     XP_061013297.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157314.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..262
                     /product="tropomyosin alpha-1 chain isoform X24"
                     /calculated_mol_wt=29918
     Region          12..223
                     /region_name="Tropomyosin"
                     /note="pfam00261"
                     /db_xref="CDD:459736"
     CDS             1..262
                     /gene="TPM1"
                     /coded_by="XM_061157314.1:16..804"
                     /db_xref="GeneID:133066329"
ORIGIN      
        1 magsssleav rrkirslqeq adaaeerags lqreldyerk lretaeadva slnrriqlve
       61 eeldraqerl atalqkleea ekaadeserg mkviesraqk deekmeiqei qlkeakhiae
      121 dadrkyeeva rklviiesdl eraeeraels egkcaeleee lktvtnnlks leaqaekysq
      181 kedkyeeeik vlsdklkeae traefaersv tkleksiddl edkylcftsp ktpssswmsh
      241 lselcslsvl qltlilsfhi lp
//
LOCUS       XP_061013298             262 aa            linear   MAM 02-DEC-2023
DEFINITION  tropomyosin alpha-1 chain isoform X25 [Dama dama].
ACCESSION   XP_061013298
VERSION     XP_061013298.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157315.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..262
                     /product="tropomyosin alpha-1 chain isoform X25"
                     /calculated_mol_wt=30057
     Region          12..223
                     /region_name="Tropomyosin"
                     /note="pfam00261"
                     /db_xref="CDD:459736"
     CDS             1..262
                     /gene="TPM1"
                     /coded_by="XM_061157315.1:24..812"
                     /db_xref="GeneID:133066329"
ORIGIN      
        1 magsssleav rrkirslqeq adaaeerags lqreldyerk lretaeadva slnrriqlve
       61 eeldraqerl atalqkleea ekaadeserg mkviesraqk deekmeiqei qlkeakhiae
      121 dadrkyeeva rklviiesdl eraeeraels egqvrqleeq lrimdqtlka lmaaedkysq
      181 kedkyeeeik vlsdklkeae traefaersv tkleksiddl edkylcftsp ktpssswmsh
      241 lselcslsvl qltlilsfhi lp
//
LOCUS       XP_061013299             556 aa            linear   MAM 02-DEC-2023
DEFINITION  serine beta-lactamase-like protein LACTB, mitochondrial [Dama
            dama].
ACCESSION   XP_061013299
VERSION     XP_061013299.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157316.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..556
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..556
                     /product="serine beta-lactamase-like protein LACTB,
                     mitochondrial"
                     /calculated_mol_wt=61387
     Region          94..531
                     /region_name="AmpC"
                     /note="CubicO group peptidase, beta-lactamase class C
                     family [Defense mechanisms]; COG1680"
                     /db_xref="CDD:441286"
     CDS             1..556
                     /gene="LACTB"
                     /coded_by="XM_061157316.1:29..1699"
                     /db_xref="GeneID:133066334"
ORIGIN      
        1 myrllsavta raattggcaw gcgrravhqr aglpplgpgw vgglglglgl algvklaggl
       61 rgaspappaa apdpeappqa eplpsqeqpl apwspqtpap pharhfarai dssrdllhri
      121 kdevgapgiv vgvsvdgkev wseglgyadv enrvpckpet vmriasisks ltmvaiaklw
      181 eagkldldip vqhyvpefpe keyegekvsv ttrllishls girhyekdmk kvkeekayka
      241 lqmmkglmes dqekelkekg gksnekndfa kakveqdset kgrnskpckk kndfeqgely
      301 lkekfensie slrlfkndpl ffkpgsqfly stfgytllaa iverasgyky ldymqkifhd
      361 ldmlttvqee nepviynrar fyvynkkkrl vntpyvdnsy kwagggflst vgdllkfgna
      421 mlygyqvglf knsnenllpg ylkpetmlmi wtpvpntems wdkegkyama wgvvekkqty
      481 gscrkqrhya shtggavgas svllvlpeel dadalnnkvp prgivvsiic nmqsvglnnt
      541 alkialefdk drsdvp
//
LOCUS       XP_061013300             355 aa            linear   MAM 02-DEC-2023
DEFINITION  carbonic anhydrase 12 isoform X1 [Dama dama].
ACCESSION   XP_061013300
VERSION     XP_061013300.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157317.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..355
                     /product="carbonic anhydrase 12 isoform X1"
                     /calculated_mol_wt=39522
     Region          39..289
                     /region_name="alpha_CA"
                     /note="Carbonic anhydrase alpha (vertebrate-like) group.
                     Carbonic anhydrases (CAs) are zinc-containing enzymes that
                     catalyze the reversible hydration of carbon dioxide in a
                     two-step mechanism: a nucleophilic attack of a zinc-bound
                     hydroxide ion on carbon...; cl00012"
                     /db_xref="CDD:469577"
     Site            order(94,117,119,121,132,145,226)
                     /site_type="active"
                     /db_xref="CDD:239400"
     Site            order(119,121,145)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:239400"
     CDS             1..355
                     /gene="CA12"
                     /coded_by="XM_061157317.1:37..1104"
                     /db_xref="GeneID:133066335"
ORIGIN      
        1 mprcslhaaa vlllvvlkeq psspaplngs kwtyigpdge kswsktypsc ggllqspidl
       61 hddilrynas lgplafqgyn qsaspqfvlt nnghsvkvkl pkdmqlrglg arynasqlhl
      121 hwgdkddphg sehtvsgkhf aaelhivyyn sdrypndsva kdkpeglavv avlievgssn
      181 paydkifdhl tavkykdqev fipgfsieel lperpeeyyr yrgslttppc yptvlwtvfr
      241 npvqisqeql mkletdlyct hmddpsprem vnnfrrvqkf derlvyvsfq qvpdppctgl
      301 spgivlsval acglgicivl avsiwlfrrr kssqkgankg viykpaikqe teaha
//
LOCUS       XP_061013301             344 aa            linear   MAM 02-DEC-2023
DEFINITION  carbonic anhydrase 12 isoform X2 [Dama dama].
ACCESSION   XP_061013301
VERSION     XP_061013301.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157318.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..344
                     /product="carbonic anhydrase 12 isoform X2"
                     /calculated_mol_wt=38458
     Region          39..289
                     /region_name="alpha_CA"
                     /note="Carbonic anhydrase alpha (vertebrate-like) group.
                     Carbonic anhydrases (CAs) are zinc-containing enzymes that
                     catalyze the reversible hydration of carbon dioxide in a
                     two-step mechanism: a nucleophilic attack of a zinc-bound
                     hydroxide ion on carbon...; cl00012"
                     /db_xref="CDD:469577"
     Site            order(94,117,119,121,132,145,226)
                     /site_type="active"
                     /db_xref="CDD:239400"
     Site            order(119,121,145)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:239400"
     CDS             1..344
                     /gene="CA12"
                     /coded_by="XM_061157318.1:37..1071"
                     /db_xref="GeneID:133066335"
ORIGIN      
        1 mprcslhaaa vlllvvlkeq psspaplngs kwtyigpdge kswsktypsc ggllqspidl
       61 hddilrynas lgplafqgyn qsaspqfvlt nnghsvkvkl pkdmqlrglg arynasqlhl
      121 hwgdkddphg sehtvsgkhf aaelhivyyn sdrypndsva kdkpeglavv avlievgssn
      181 paydkifdhl tavkykdqev fipgfsieel lperpeeyyr yrgslttppc yptvlwtvfr
      241 npvqisqeql mkletdlyct hmddpsprem vnnfrrvqkf derlvyvsfq qgivlsvala
      301 cglgicivla vsiwlfrrrk ssqkgankgv iykpaikqet eaha
//
LOCUS       XP_061013302             257 aa            linear   MAM 02-DEC-2023
DEFINITION  gamma-secretase subunit APH-1B isoform X1 [Dama dama].
ACCESSION   XP_061013302
VERSION     XP_061013302.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157319.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..257
                     /product="gamma-secretase subunit APH-1B isoform X1"
                     /calculated_mol_wt=28656
     Region          3..232
                     /region_name="Aph-1"
                     /note="Aph-1 protein; pfam06105"
                     /db_xref="CDD:461830"
     CDS             1..257
                     /gene="APH1B"
                     /coded_by="XM_061157319.1:5719..6492"
                     /db_xref="GeneID:133066336"
ORIGIN      
        1 mtaavffgca fiafgpalal yiftistepl riiflivgaf fwlvsllfss liwfmtttli
       61 dnkdepreky llifgvlisv liqemfrfay ykllkkaseg lktinpyeea psmrllayvs
      121 glgfgimsgi fsfvntlsds lgpgtvgihg dppqfflnsa fmtlvitllh vfwgivffdg
      181 cakkkwytll vvvlshllvs altfisphyg lnlvlayiim vltgvwaffv sggscrslkl
      241 cllcqdkdfl lfnqhar
//
LOCUS       XP_061013303             239 aa            linear   MAM 02-DEC-2023
DEFINITION  gamma-secretase subunit APH-1B isoform X2 [Dama dama].
ACCESSION   XP_061013303
VERSION     XP_061013303.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157320.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..239
                     /product="gamma-secretase subunit APH-1B isoform X2"
                     /calculated_mol_wt=26619
     Region          21..214
                     /region_name="Aph-1"
                     /note="Aph-1 protein; pfam06105"
                     /db_xref="CDD:461830"
     CDS             1..239
                     /gene="APH1B"
                     /coded_by="XM_061157320.1:107..826"
                     /db_xref="GeneID:133066336"
ORIGIN      
        1 mtlcaveshl asgetarpgq affwlvsllf ssliwfmttt lidnkdepre kyllifgvli
       61 svliqemfrf ayykllkkas eglktinpye eapsmrllay vsglgfgims gifsfvntls
      121 dslgpgtvgi hgdppqffln safmtlvitl lhvfwgivff dgcakkkwyt llvvvlshll
      181 vsaltfisph yglnlvlayi imvltgvwaf fvsggscrsl klcllcqdkd fllfnqhar
//
LOCUS       XP_061013304             200 aa            linear   MAM 02-DEC-2023
DEFINITION  gamma-secretase subunit APH-1B isoform X3 [Dama dama].
ACCESSION   XP_061013304
VERSION     XP_061013304.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157321.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..200
                     /product="gamma-secretase subunit APH-1B isoform X3"
                     /calculated_mol_wt=21761
     Region          3..175
                     /region_name="Aph-1"
                     /note="Aph-1 protein; pfam06105"
                     /db_xref="CDD:461830"
     CDS             1..200
                     /gene="APH1B"
                     /coded_by="XM_061157321.1:5719..6321"
                     /db_xref="GeneID:133066336"
ORIGIN      
        1 mtaavffgca fiafgpalal yiftistepl riiflivgka seglktinpy eeapsmrlla
       61 yvsglgfgim sgifsfvntl sdslgpgtvg ihgdppqffl nsafmtlvit llhvfwgivf
      121 fdgcakkkwy tllvvvlshl lvsaltfisp hyglnlvlay iimvltgvwa ffvsggscrs
      181 lklcllcqdk dfllfnqhar
//
LOCUS       XP_061013305             207 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-related protein Rab-8B [Dama dama].
ACCESSION   XP_061013305
VERSION     XP_061013305.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157322.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..207
                     /product="ras-related protein Rab-8B"
                     /calculated_mol_wt=23529
     Region          6..172
                     /region_name="Rab8_Rab10_Rab13_like"
                     /note="Rab GTPase families 8, 10, 13 (Rab8, Rab10, Rab13);
                     cd01867"
                     /db_xref="CDD:206659"
     Site            6..10
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206659"
     Site            15..22
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206659"
     Site            order(17..23,33..36,39..40,66,121..122,124..125,152..153)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206659"
     Site            order(23..35,37..39)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206659"
     Site            order(33,38..46)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206659"
     Site            order(36,38,42..49,56,58)
                     /site_type="other"
                     /note="GEF interaction site [polypeptide binding]"
                     /db_xref="CDD:206659"
     Site            40
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206659"
     Site            order(41,43..45,60,62,69..70,73,77,79..82,169)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206659"
     Site            order(41..42,44,62..63,70,72,74..76)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206659"
     Site            41..45
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206659"
     Site            58..62
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206659"
     Site            63..66
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206659"
     Site            order(66,68..78)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206659"
     Site            69..74
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206659"
     Site            77..81
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206659"
     Site            86..91
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206659"
     Site            109..118
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206659"
     Site            121..124
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206659"
     Site            151..153
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206659"
     Site            167..172
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206659"
     CDS             1..207
                     /gene="RAB8B"
                     /coded_by="XM_061157322.1:69..692"
                     /db_xref="GeneID:133066337"
ORIGIN      
        1 maktydylfk llligdsgvg ktcllfrfse dafnttfist igidfkirti eldgkkiklq
       61 iwdtagqerf rtittayyrg amgimlvydi tneksfdnik nwirnieeha ssdvermilg
      121 nkcdmndkrq vskergekla idygikflet sakssmnvee afftlardim tklnrkmnds
      181 nssgaggpvk itenrskkts ffrcsll
//
LOCUS       XP_061013306              84 aa            linear   MAM 02-DEC-2023
DEFINITION  ribosomal protein eS27-like [Dama dama].
ACCESSION   XP_061013306
VERSION     XP_061013306.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157323.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..84
                     /product="ribosomal protein eS27-like"
                     /calculated_mol_wt=9346
     Region          6..82
                     /region_name="PLN00209"
                     /note="ribosomal protein S27; Provisional"
                     /db_xref="CDD:165774"
     CDS             1..84
                     /gene="RPS27L"
                     /coded_by="XM_061157323.1:147..401"
                     /db_xref="GeneID:133066338"
ORIGIN      
        1 mplardllhp sleeekkkhk kkrlvqspns yfmdvkcpgc ykittvfsha qtvvlcvgcs
       61 tvlcqptggk arltegcsfr rkqh
//
LOCUS       XP_061013307             520 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin carboxyl-terminal hydrolase 3 isoform X1 [Dama dama].
ACCESSION   XP_061013307
VERSION     XP_061013307.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157324.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..520
                     /product="ubiquitin carboxyl-terminal hydrolase 3 isoform
                     X1"
                     /calculated_mol_wt=58870
     Region          29..105
                     /region_name="zf-UBP"
                     /note="Zn-finger in ubiquitin-hydrolases and other
                     protein; pfam02148"
                     /db_xref="CDD:460464"
     Region          159..508
                     /region_name="UCH"
                     /note="Ubiquitin carboxyl-terminal hydrolase; pfam00443"
                     /db_xref="CDD:425685"
     Site            order(163,168,471,487)
                     /site_type="active"
                     /db_xref="CDD:239125"
     CDS             1..520
                     /gene="USP3"
                     /coded_by="XM_061157324.1:221..1783"
                     /db_xref="GeneID:133066339"
ORIGIN      
        1 mecphlsssv ciapdsakfp ngspsswccs vcrsnkspwv cltcssvhcg ryvnghakkh
       61 yedaqipltn hkksekpeka qhtvcmdcss ystycyrcdd fvvndtklgl vqkvrehlqn
      121 lenssftadr hrkrkllens slnskllkvn gsttaicatg lrnlgntcfm nailqslsni
      181 eqfccyfkel pavelrngkt agrrtyhtrs qgdnnvslve efrktlcalw qgsqtafspe
      241 slfyvvwkim pnfrgyqqqd ahefmrylld hlhlelqggf ngisrssilq enstlsasnk
      301 ccingastvv taifggilqn evnclicgte srkfdpfldl sldipsqfrn krsknqengp
      361 tcslrdclrs ftdleeldet elymchkckk kqkstkkfwi qklpkvlclh lkrfhwtayl
      421 rnkvdtyvef plrgldmkcy llepensgpe nclydlaavv vhhgsgvgsg hytayatheg
      481 rwfhfndstv tlteedtvvk akayilfyve rqakagsdkl
//
LOCUS       XP_061013308             435 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin carboxyl-terminal hydrolase 3 isoform X2 [Dama dama].
ACCESSION   XP_061013308
VERSION     XP_061013308.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157325.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..435
                     /product="ubiquitin carboxyl-terminal hydrolase 3 isoform
                     X2"
                     /calculated_mol_wt=49543
     Region          74..423
                     /region_name="UCH"
                     /note="Ubiquitin carboxyl-terminal hydrolase; pfam00443"
                     /db_xref="CDD:425685"
     Site            order(78,83,386,402)
                     /site_type="active"
                     /db_xref="CDD:239072"
     CDS             1..435
                     /gene="USP3"
                     /coded_by="XM_061157325.1:291..1598"
                     /db_xref="GeneID:133066339"
ORIGIN      
        1 mdcssystyc yrcddfvvnd tklglvqkvr ehlqnlenss ftadrhrkrk llensslnsk
       61 llkvngstta icatglrnlg ntcfmnailq slsnieqfcc yfkelpavel rngktagrrt
      121 yhtrsqgdnn vslveefrkt lcalwqgsqt afspeslfyv vwkimpnfrg yqqqdahefm
      181 rylldhlhle lqggfngisr ssilqenstl sasnkccing astvvtaifg gilqnevncl
      241 icgtesrkfd pfldlsldip sqfrnkrskn qengptcslr dclrsftdle eldetelymc
      301 hkckkkqkst kkfwiqklpk vlclhlkrfh wtaylrnkvd tyvefplrgl dmkcyllepe
      361 nsgpenclyd laavvvhhgs gvgsghytay athegrwfhf ndstvtltee dtvvkakayi
      421 lfyverqaka gsdkl
//
LOCUS       XP_061013309             226 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box and leucine-rich protein 22 [Dama dama].
ACCESSION   XP_061013309
VERSION     XP_061013309.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157326.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..226
                     /product="F-box and leucine-rich protein 22"
                     /calculated_mol_wt=25318
     Region          3..45
                     /region_name="F-box_FBXL22"
                     /note="F-box domain found in F-box/LRR-repeat protein 22
                     (FBXL22) and similar proteins; cd22129"
                     /db_xref="CDD:438901"
     Site            order(6,10,13..14,17..18,22,24..25,29..31,33)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438901"
     Region          51..76
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          88..>195
                     /region_name="AMN1"
                     /note="Antagonist of mitotic exit network protein 1;
                     cd09293"
                     /db_xref="CDD:187754"
     Region          92..115
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          116..141
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          142..167
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          168..193
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..226
                     /gene="FBXL22"
                     /coded_by="XM_061157326.1:57..737"
                     /db_xref="GeneID:133066341"
ORIGIN      
        1 mhitqlnrec llhlfsfldk dsrknlartc pqlqdvfedp alwpllhfrs laelkkdnfl
       61 lspalrslsi cwhssrvqvc siedwlksal qrsicsrhes lvndfllrvc drcpnlatvt
      121 lsgcghvtdd clarllvscp rlralhlenc arvtnrtlta vaahgralqt lhvdfcrnvs
      181 aaglrrlraa cprltlraeh saamipdqlp rgphapgtal rklllr
//
LOCUS       XP_061013310            4855 aa            linear   MAM 02-DEC-2023
DEFINITION  probable E3 ubiquitin-protein ligase HERC1 [Dama dama].
ACCESSION   XP_061013310
VERSION     XP_061013310.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157327.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4855
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..4855
                     /product="probable E3 ubiquitin-protein ligase HERC1"
                     /calculated_mol_wt=531282
     Region          374..703
                     /region_name="ATS1"
                     /note="Alpha-tubulin suppressor ATS1 and related RCC1
                     domain-containing proteins [Cell cycle control, cell
                     division, chromosome partitioning, Cytoskeleton]; COG5184"
                     /db_xref="CDD:444065"
     Region          683..733
                     /region_name="RCC1"
                     /note="Regulator of chromosome condensation (RCC1) repeat;
                     pfam00415"
                     /db_xref="CDD:395335"
     Region          2028..2185
                     /region_name="SPRY_HERC1"
                     /note="SPRY domain in HERC1; cd12881"
                     /db_xref="CDD:293939"
     Region          2747..2790
                     /region_name="UBA_HERC1"
                     /note="UBA domain found in probable E3 ubiquitin-protein
                     ligase HERC1 and similar proteins; cd14401"
                     /db_xref="CDD:270584"
     Region          3360..3794
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          3426..3469
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3483..3518
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3523..3570
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3579..3614
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3623..3659
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3666..3697
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3744..3780
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3993..4329
                     /region_name="ATS1"
                     /note="Alpha-tubulin suppressor ATS1 and related RCC1
                     domain-containing proteins [Cell cycle control, cell
                     division, chromosome partitioning, Cytoskeleton]; COG5184"
                     /db_xref="CDD:444065"
     Region          4467..4835
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cd00078"
                     /db_xref="CDD:238033"
     Site            order(4472,4513,4524,4591,4769,4799..4800,4803..4807,4827,
                     4834)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Site            order(4619,4622..4623,4625..4626,4629,4637,4639,
                     4643..4644,4646,4655,4660,4677,4681)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..4855
                     /gene="HERC1"
                     /coded_by="XM_061157327.1:146..14713"
                     /db_xref="GeneID:133066342"
ORIGIN      
        1 matmvppvkl kwlehlnssw itedsesiat regvavlysk lvsnkevvpl pqqvlclkgp
       61 qlpdferesl ssdeqdhyld allssqlala kmvcsdspfa galrkrllvl qrvfyalsnk
      121 yhdkgkvkqq qhspesssgs advhsvserp rsstdaliem gvrtglsllf allrqswmmp
      181 vsgpglslcn dvihtaievv sslpplslan eskippmgld clsqvttflk gvtipnsgad
      241 tlgrrlasel llglaaqrgs lryllewiem algasavvns mekskllssq egmisfdcfm
      301 tilmqmrrsl gssadrsqwr eptrtsdglc slyeaalclf eevcrmasdy srtcaspdsi
      361 qtgdtpivse tcevyvwgsn sshqlvegtq ekilqpklap sfsdaqtiea gqyctfvist
      421 dgsvracgkg sygrlglgds nnqstlkklt fephrsikkv ssskgsdght lafttegevf
      481 swgdgdygkl ghgnsstqky pkliqgplqg kvvvcvsagy rhsaavtedg elytwgegdf
      541 grlghgdsns rniptlvkdi snvgevscgs shtialskdg rtvwsfgggd ngklghgdtn
      601 rvykpkviea lqgmfirkvc agsqsslalt stgqvyawgc gaclgcgsse atalrpklie
      661 elaatrivdi sigdshclal shdnevyawg nnsmgqcgqg nstgpitkpk kvsgldgiai
      721 qqisagtshs lawtalprdr qvvawhrpyc vdleestfsh lrsflerycd kinseipplp
      781 fpssrehhnf lklclkllsn hlalalaggv atsilgrqag plrnllfrlm dstvpdeiqe
      841 vvietlsvga tmllpplrer mellhsllpq gpdrweslsk gqrmqldiil tslqdhthva
      901 sllgysspsd aadlssvctg ygnlsdqpyg tqschpdthl aeilmktllr nlgfytdqaf
      961 geleknsdkf llgtsssens qpahlhellc slqkqllafc hinnisenss svallhkhlq
     1021 lllphatdiy srsanllees pwngsvgekl rdviyvsaag smlcqiansl lllpvsvarp
     1081 llsylldllp pldclnrllp aaalledqel qwplhggpel idpagvplpq paqswvwlvd
     1141 lertiallig rclggmlqgs pvspeeqdta ywmktplfsd gvemdtpqld kcmsclleva
     1201 lsgneeqkpf dyklrpeiav fvdlalgcsk eparslwism qdyaiskdwd satlsnesll
     1261 dtvsrfvlaa llkhtnllsq acgesryqpg kslsevyrcv ykvrsrllac knleliqtrs
     1321 ssrdrwisen qdsadvdpqe hsftrtidee aemeeqaerd reeghaeped eeeerehevm
     1381 tagkifqcfl sarevarsrd rdrmnsgags garaddpppq aqqerrvstd lpegqdvyta
     1441 acnsvihrca llilgvspvi eelqkrreeg qlqqpststs eggglmtrse sltaesrlvh
     1501 aspnyrliks rsesdlsqpe sdeegyalsg rrnvdldlas shrkrgpmhs qleslsdswt
     1561 rlkhnrdwlc nssysfesdf dltkslgvht lienvvsfvs gdvgnapgfk epeesmstsp
     1621 qasiiameqq qlraelrlea lhqilvllsg meekgsislt gsrsssdfqs stlltsvrlq
     1681 flagcfglgt vghagakges grlhhyqdgi raakrniqie iqvavhkiyq qlsatleral
     1741 qankhhieaq qrlllvtvfa lsvhyqpvdv slaistglln vlsqlcgtdt mlgqplqllp
     1801 ktgvsqlsta lkvastrllq ilaittgtya dklspkvvqs lldllcsqlk nllsqagvll
     1861 masfgegede eekktdssge tekrdfraal rkqhaaelhl gdflvflrrv vsskaiqskm
     1921 aspkwtevll niasqkcssg iplvgnlrtr llalhvleav lpacesgved dqmaqvverl
     1981 fsllsdcmwe tpiaqakhai qikekeqeik lqkqgeleee denlpiqevs fdpekaqcci
     2041 vengqilthg sggkgyglas tgvtsgcyqw kfyivkenrg negtcvgvsr wpvhdfnhrt
     2101 tsdmwlyray sgnlyhngeq tltlssftqg dfitcvldme artisfgkng eepklafedv
     2161 daaelypcvm fyssnpgekv kicdmqmrgt prdllpgdpi cspvaavlae atiqlirilh
     2221 rtdrwtycin kkmmerlhki kicikesgqk lkksrsvqsr eenemreeke nkeeekgkhs
     2281 rhgladlsep qlrtlcievw pvlaviggvd aglrvggrcv hkqtgrhatl lgvvkegsts
     2341 akvqwdeaei tisfptfwsp sdtplynlep ceplpfdvar frgltasvll dltyltgihe
     2401 dmgkqstkrh ekkhrhesee kgdveqkies esaldtrtgl tsddvkatts skseneiasf
     2461 sldsavpgae sqhqitegkr knhehvsknh diaqseirav qlsylylgam kslsallgcs
     2521 kyaelllipk vlaenghnsd casspvvhed vemraalqfl mrhmvkravm rspikralgl
     2581 adleraqami yklvvhglle dqfggkikqe idqqaeesdq aqqaqtpvtt spsassttsf
     2641 msssledttt attpvtdtet vpasespgvm plsllrqmfs syptttvlpt rraqtppiss
     2701 lptspsdevg rrqsltspds qsarpanrta lsdpssrlst sppppaiavp llemgfslrq
     2761 iakameatga rgeadaqnit vlamwmiehp ghedeeepqs gstadsrhga avagssgksn
     2821 dpcylqspgd ipsadaaeme egfsesadnl dhaentasgs gppargrsav trrhkfdlaa
     2881 rtllaraagl yrsvqahrnq srregislqq dpgalydfnl deeleidldd eameamfgqd
     2941 ltsdndilgm wipevldwpt whvcesedre evvvcelcec svinfnqhmk rnhpgcgrsa
     3001 nrqgyrsngs yvdgwfggec gsgnpyyllc gscrekylal ktkskatsse rykgqapdli
     3061 gkqdsvyeed wdmldvdede kltgeeefel lagplglndr rivpepvqfp dsdplgasva
     3121 mvtatnsmee tlmqigchgs veksssgrit lgeqaaalan phdrvvalrr vtaaaqvlla
     3181 rtmvmralsl lsvsgsscsl aagleslglt dirtlvrlmc laaagragls tspsamasts
     3241 ersrgghska nkpisclayl stavgclasn tpsaakllvq lctqnlisaa tgvnlttvdd
     3301 piqrkflpsf lrgiaeenkl vtspnfvvtq alvalladkg aklrpnydks evekkgplel
     3361 analaaccls srlssqhrqw aaqqlvrtla ahdrdnqttp qtladmggdl rkcsfiklea
     3421 hqnrvmtcvw cnkkgllats gndgtirvwn vtkkqyslqq tcvfnrlegd aeeslgspsd
     3481 psfspvswsi sgkylagale kmvniwqvng gkglvdiqph wvsalawpee gpstawsges
     3541 pelllvgrmd gslglievvd vstmhrrele hcyrkdvsvt ciawfsedrp favgyfdgkl
     3601 llgtkeplek ggivlidahk dtlismkwdp tghilmtcak eenvklwgpi sgcwrclhsl
     3661 chpsivngia wcslpgkgsk lhllmatgcq sglvcvwrip qdatqtsvts segwwdqess
     3721 cqdgyrksvg akcvyqlrgh itpvrtvafs sdglalvsgg lgglmniwsl rdgsvlqtvv
     3781 igsgaiqttv wipdvgvaac snrskdvlvv nctaewtaan hvlatcrtal kqqgilglnm
     3841 apcmrafler lpvmlqeqya yekphvvcgd qlvhspymqc laslavglhl dqllcnppvp
     3901 phhqhclpdp aswnpnewaw lecfsttika aealtngaqf pesftvpdle pvpedelvll
     3961 mdnskwingm deqimswats rpedwhlggk cdvylwgagr hgqlaeagrn vmvpaaapsf
     4021 sqaqqvicgq nctfviqang tvlacgegsy grlgqgnsdd lhvltvisal qgfvvtqlvt
     4081 scgsdghsma ltesgevfsw gdgdygklgh gnsdrqrrpr qiealqgeev vqmscgfkhs
     4141 avvtsdgklf tfgngdygrl glgntsnkkl pervtalegy qigqvacgln htlavsadgs
     4201 mvwafgdgdy gklglgnsta ksspqkvdvl cgigikkvac gtqfsvaltk dghvytfgqd
     4261 rliglpegra rnhnrpqqip vlagvviedv avgaehtlal astgdvyawg snsegqlglg
     4321 htnhvreptl vtvlqgknir qisagrchsa awtappvppr apgvsvplql glpdtvppqy
     4381 galrevsiht ararlrllyh fsdlmysswr llnlspnnqn stshynagtw givqgqlrpl
     4441 laprvytlpm vrsigktmvq gknygpqitv kristrgrkc kpifvqiarq vvklnasdlr
     4501 lpsrawkvkl vgegaddagg vfddtitemc qeletgivdl lipspnatae vgynrdrflf
     4561 npsacldehl mqfkflgilm gvairtkkpl dlhlaplvwk qlccvpltle dleevdllyv
     4621 qtlnsilhie dsgiteesfh emipldsfvg qsadgkmvpi ipggnsiplt fsnrkeyver
     4681 aieyrlhemd rqvaavregm swivpvplls lltakqleqm vcgmpeisve vlkkvvryre
     4741 vdeqhqlvqw fwhtleefsn eervlfmrfv sgrsrlpant adisqrfqim kvdrpydslp
     4801 tsqtcffqlr lppyssqlvm aerlryainn crsidmdnym lsrnvdnaeg sdtdy
//
LOCUS       XP_061013312             378 aa            linear   MAM 02-DEC-2023
DEFINITION  death-associated protein kinase 2 isoform X1 [Dama dama].
ACCESSION   XP_061013312
VERSION     XP_061013312.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157329.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..378
                     /product="death-associated protein kinase 2 isoform X1"
                     /calculated_mol_wt=43397
     Region          25..293
                     /region_name="STKc_DAPK2"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Death-Associated Protein Kinase 2; cd14196"
                     /db_xref="CDD:271098"
     Site            order(37..41,43,45,58,60,95,111..112,114,118,120,157,159,
                     161..162,164,178..179,182,197..200)
                     /site_type="active"
                     /db_xref="CDD:271098"
     Site            order(37..41,43,45,58,60,95,111..112,114,118,161..162,164,
                     178..179)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271098"
     Site            order(41,118,120,157,159,161,182,197..200)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271098"
     Site            order(65,68..69,71,75,78,161,192..195,200,207..209,
                     236..241,244..245,248)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:271098"
     Site            178..200
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271098"
     CDS             1..378
                     /gene="LOC133066343"
                     /coded_by="XM_061157329.1:40..1176"
                     /db_xref="GeneID:133066343"
ORIGIN      
        1 mytnfqgctl qasmkspnme tfkqqkvedf ydigeelgsg qfaivkkcre kstgleyaak
       61 fikkrqsras rrgvcleeiq revsilrrvl hpnvitlhdv fenrtdvvli lelvsggelf
      121 dflaqkesls eeeatsfikq ilegvnylha kkiahfdlkp enimlldkni piphiklidf
      181 glaheiedgv efknifgtpe fvapeivnye plgleadmws igvityills gaspflgdtk
      241 qetlanitav sydfdeeffs qtselakdfi rkllvketrk rltiqealsh pwitpvnsqq
      301 alirresavn lenfkkqyvr rrwklsfsiv slcnhltrsl mkkvhlrpne dlrncesdte
      361 ediakrkalr prrrssis
//
LOCUS       XP_061013313             365 aa            linear   MAM 02-DEC-2023
DEFINITION  death-associated protein kinase 2 isoform X2 [Dama dama].
ACCESSION   XP_061013313
VERSION     XP_061013313.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157330.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..365
                     /product="death-associated protein kinase 2 isoform X2"
                     /calculated_mol_wt=41951
     Region          12..280
                     /region_name="STKc_DAPK2"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Death-Associated Protein Kinase 2; cd14196"
                     /db_xref="CDD:271098"
     Site            order(24..28,30,32,45,47,82,98..99,101,105,107,144,146,
                     148..149,151,165..166,169,184..187)
                     /site_type="active"
                     /db_xref="CDD:271098"
     Site            order(24..28,30,32,45,47,82,98..99,101,105,148..149,151,
                     165..166)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271098"
     Site            order(28,105,107,144,146,148,169,184..187)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271098"
     Site            order(52,55..56,58,62,65,148,179..182,187,194..196,
                     223..228,231..232,235)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:271098"
     Site            165..187
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271098"
     CDS             1..365
                     /gene="LOC133066343"
                     /coded_by="XM_061157330.1:110..1207"
                     /db_xref="GeneID:133066343"
ORIGIN      
        1 mkspnmetfk qqkvedfydi geelgsgqfa ivkkcrekst gleyaakfik krqsrasrrg
       61 vcleeiqrev silrrvlhpn vitlhdvfen rtdvvlilel vsggelfdfl aqkeslseee
      121 atsfikqile gvnylhakki ahfdlkpeni mlldknipip hiklidfgla heiedgvefk
      181 nifgtpefva peivnyeplg leadmwsigv ityillsgas pflgdtkqet lanitavsyd
      241 fdeeffsqts elakdfirkl lvketrkrlt iqealshpwi tpvnsqqali rresavnlen
      301 fkkqyvrrrw klsfsivslc nhltrslmkk vhlrpnedlr ncesdteedi akrkalrprr
      361 rssis
//
LOCUS       XP_061013314             365 aa            linear   MAM 02-DEC-2023
DEFINITION  death-associated protein kinase 2 isoform X2 [Dama dama].
ACCESSION   XP_061013314
VERSION     XP_061013314.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157331.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..365
                     /product="death-associated protein kinase 2 isoform X2"
                     /calculated_mol_wt=41951
     Region          12..280
                     /region_name="STKc_DAPK2"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Death-Associated Protein Kinase 2; cd14196"
                     /db_xref="CDD:271098"
     Site            order(24..28,30,32,45,47,82,98..99,101,105,107,144,146,
                     148..149,151,165..166,169,184..187)
                     /site_type="active"
                     /db_xref="CDD:271098"
     Site            order(24..28,30,32,45,47,82,98..99,101,105,148..149,151,
                     165..166)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271098"
     Site            order(28,105,107,144,146,148,169,184..187)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271098"
     Site            order(52,55..56,58,62,65,148,179..182,187,194..196,
                     223..228,231..232,235)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:271098"
     Site            165..187
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271098"
     CDS             1..365
                     /gene="LOC133066343"
                     /coded_by="XM_061157331.1:98..1195"
                     /db_xref="GeneID:133066343"
ORIGIN      
        1 mkspnmetfk qqkvedfydi geelgsgqfa ivkkcrekst gleyaakfik krqsrasrrg
       61 vcleeiqrev silrrvlhpn vitlhdvfen rtdvvlilel vsggelfdfl aqkeslseee
      121 atsfikqile gvnylhakki ahfdlkpeni mlldknipip hiklidfgla heiedgvefk
      181 nifgtpefva peivnyeplg leadmwsigv ityillsgas pflgdtkqet lanitavsyd
      241 fdeeffsqts elakdfirkl lvketrkrlt iqealshpwi tpvnsqqali rresavnlen
      301 fkkqyvrrrw klsfsivslc nhltrslmkk vhlrpnedlr ncesdteedi akrkalrprr
      361 rssis
//
LOCUS       XP_061013315             240 aa            linear   MAM 02-DEC-2023
DEFINITION  death-associated protein kinase 2 isoform X3 [Dama dama].
ACCESSION   XP_061013315
VERSION     XP_061013315.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157332.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..240
                     /product="death-associated protein kinase 2 isoform X3"
                     /calculated_mol_wt=27455
     Region          <22..155
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..240
                     /gene="LOC133066343"
                     /coded_by="XM_061157332.1:234..956"
                     /db_xref="GeneID:133066343"
ORIGIN      
        1 mekrdeapil avgprilarg npenimlldk nipiphikli dfglaheied gvefknifgt
       61 pefvapeivn yeplgleadm wsigvityil lsgaspflgd tkqetlanit avsydfdeef
      121 fsqtselakd firkllvket rkrltiqeal shpwitpvns qqalirresa vnlenfkkqy
      181 vrrrwklsfs ivslcnhltr slmkkvhlrp nedlrncesd teediakrka lrprrrssis
//
LOCUS       XP_061013316             496 aa            linear   MAM 02-DEC-2023
DEFINITION  death-associated protein kinase 2 isoform X4 [Dama dama].
ACCESSION   XP_061013316
VERSION     XP_061013316.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157333.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..496
                     /product="death-associated protein kinase 2 isoform X4"
                     /calculated_mol_wt=56623
     Region          25..293
                     /region_name="STKc_DAPK2"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Death-Associated Protein Kinase 2; cd14196"
                     /db_xref="CDD:271098"
     Site            order(37..41,43,45,58,60,95,111..112,114,118,120,157,159,
                     161..162,164,178..179,182,197..200)
                     /site_type="active"
                     /db_xref="CDD:271098"
     Site            order(37..41,43,45,58,60,95,111..112,114,118,161..162,164,
                     178..179)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271098"
     Site            order(41,118,120,157,159,161,182,197..200)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271098"
     Site            order(65,68..69,71,75,78,161,192..195,200,207..209,
                     236..241,244..245,248)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:271098"
     Site            178..200
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271098"
     CDS             1..496
                     /gene="LOC133066343"
                     /coded_by="XM_061157333.1:40..1530"
                     /db_xref="GeneID:133066343"
ORIGIN      
        1 mytnfqgctl qasmkspnme tfkqqkvedf ydigeelgsg qfaivkkcre kstgleyaak
       61 fikkrqsras rrgvcleeiq revsilrrvl hpnvitlhdv fenrtdvvli lelvsggelf
      121 dflaqkesls eeeatsfikq ilegvnylha kkiahfdlkp enimlldkni piphiklidf
      181 glaheiedgv efknifgtpe fvapeivnye plgleadmws igvityills gaspflgdtk
      241 qetlanitav sydfdeeffs qtselakdfi rkllvketrk rltiqealsh pwitskgeir
      301 apeqhkaepn qlktkrlrey tlkchssmpp nntyvnferf arvvedmaqv eqgcraltga
      361 hdtiqddvet lisiynekea wyreeserar hdlsqlryef rkvksskkll rediratrsr
      421 lgaaarkldh lqtqfetlrq elstdlqwlq elvggfqles gsvdspgsvf crdtseslge
      481 llnrscseev laglkl
//
LOCUS       XP_061013317             120 aa            linear   MAM 02-DEC-2023
DEFINITION  death-associated protein kinase 2-like isoform X1 [Dama dama].
ACCESSION   XP_061013317
VERSION     XP_061013317.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157334.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..120
                     /product="death-associated protein kinase 2-like isoform
                     X1"
                     /calculated_mol_wt=13735
     Region          12..>101
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..120
                     /gene="LOC133066344"
                     /coded_by="XM_061157334.1:114..476"
                     /db_xref="GeneID:133066344"
ORIGIN      
        1 mkspnmetfk qqkvedfydi geelgsgqfa ivkkcrkkst gleyaakfik krqsrasrrs
       61 vcleeiqrev silrrvlhpn vitlhdvfen rtdvvlilel vlqsvrrral qlpgpegipe
//
LOCUS       XP_061013318             120 aa            linear   MAM 02-DEC-2023
DEFINITION  death-associated protein kinase 2-like isoform X1 [Dama dama].
ACCESSION   XP_061013318
VERSION     XP_061013318.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157335.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..120
                     /product="death-associated protein kinase 2-like isoform
                     X1"
                     /calculated_mol_wt=13735
     Region          12..>101
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..120
                     /gene="LOC133066344"
                     /coded_by="XM_061157335.1:205..567"
                     /db_xref="GeneID:133066344"
ORIGIN      
        1 mkspnmetfk qqkvedfydi geelgsgqfa ivkkcrkkst gleyaakfik krqsrasrrs
       61 vcleeiqrev silrrvlhpn vitlhdvfen rtdvvlilel vlqsvrrral qlpgpegipe
//
LOCUS       XP_061013319             102 aa            linear   MAM 02-DEC-2023
DEFINITION  death-associated protein kinase 2-like isoform X2 [Dama dama].
ACCESSION   XP_061013319
VERSION     XP_061013319.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157336.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..102
                     /product="death-associated protein kinase 2-like isoform
                     X2"
                     /calculated_mol_wt=11641
     Region          9..>83
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..102
                     /gene="LOC133066344"
                     /coded_by="XM_061157336.1:170..478"
                     /db_xref="GeneID:133066344"
ORIGIN      
        1 mrnhstvigq faivkkcrkk stgleyaakf ikkrqsrasr rsvcleeiqr evsilrrvlh
       61 pnvitlhdvf enrtdvvlil elvlqsvrrr alqlpgpegi pe
//
LOCUS       XP_061013320             160 aa            linear   MAM 02-DEC-2023
DEFINITION  cytosolic iron-sulfur assembly component 2A [Dama dama].
ACCESSION   XP_061013320
VERSION     XP_061013320.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157337.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..160
                     /product="cytosolic iron-sulfur assembly component 2A"
                     /calculated_mol_wt=18263
     Region          <39..156
                     /region_name="COG5133"
                     /note="Uncharacterized conserved protein [Function
                     unknown]; cl00941"
                     /db_xref="CDD:470001"
     CDS             1..160
                     /gene="LOC133066345"
                     /coded_by="XM_061157337.1:155..637"
                     /db_xref="GeneID:133066345"
ORIGIN      
        1 mervsgllsw tlsrflwlsg lsergaarqp rimeekalev ydlirtirdp ekpntleele
       61 vvtescvevq eineddylvi irftptvphc slatliglcl rvklqqclpf khkleiyise
      121 gthsteedin kqindkerva aamenpslre iveqcvlepd
//
LOCUS       XP_061013321             522 aa            linear   MAM 02-DEC-2023
DEFINITION  sorting nexin-1 isoform X1 [Dama dama].
ACCESSION   XP_061013321
VERSION     XP_061013321.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157338.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..522
                     /product="sorting nexin-1 isoform X1"
                     /calculated_mol_wt=58775
     Region          11..90
                     /region_name="Sorting_nexin"
                     /note="Sorting nexin, N-terminal domain; pfam03700"
                     /db_xref="CDD:461016"
     Region          145..268
                     /region_name="PX_SNX1"
                     /note="The phosphoinositide binding Phox Homology domain
                     of Sorting Nexin 1; cd07281"
                     /db_xref="CDD:132814"
     Site            order(186..188,238)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132814"
     Region          286..519
                     /region_name="BAR_SNX1"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of Sorting
                     Nexin 1; cd07665"
                     /db_xref="CDD:153349"
     Site            order(315,318..319,322..323,325..326,329,332..333,336,
                     343..344,346..347,350,353..354,357..358,374,479,482..483,
                     485..487,490,493..494,496..498,500..501,504..505,507..508,
                     511..512,514..515)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153349"
     CDS             1..522
                     /gene="SNX1"
                     /coded_by="XM_061157338.1:108..1676"
                     /db_xref="GeneID:133066347"
ORIGIN      
        1 masggggcsa serlpppfpg lepesegavg gsepeagdsd tegediftga aavskpqspk
       61 riasllpins gskengihge qdqepqdlfa datvelslds tqnnqkkvpa ktlislppqe
      121 atnsskpqps yeeleeeeqe dqfdltvgit dpekigdgmn ayvaykvttq tslpmfrskh
      181 favkrrfsdf lglyeklsek hsqngfivpp ppeksligmt kvkvgkedss saeflekrra
      241 alerylqriv nhptmlqdpd vreflekeel pravgtqtls gagllkmfnk atdavskmti
      301 kmnesdiwfe eklqevecee qrlrklhavv etlvnhrkel alntaqfaks lamlgssedn
      361 talsralsql aeveekieql hqeqanndff llaellsdyi rllaivraaf dqrmktwqrw
      421 qdaqatlqkk reaearllwa nkpdklqqak deivewesrv tqyerdferi stvvrkevir
      481 fekekskdfr nhvikyletl lcsqqqlaky weaflpeaka is
//
LOCUS       XP_061013322             508 aa            linear   MAM 02-DEC-2023
DEFINITION  sorting nexin-1 isoform X2 [Dama dama].
ACCESSION   XP_061013322
VERSION     XP_061013322.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157339.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..508
                     /product="sorting nexin-1 isoform X2"
                     /calculated_mol_wt=57151
     Region          11..90
                     /region_name="Sorting_nexin"
                     /note="Sorting nexin, N-terminal domain; pfam03700"
                     /db_xref="CDD:461016"
     Region          145..268
                     /region_name="PX_SNX1"
                     /note="The phosphoinositide binding Phox Homology domain
                     of Sorting Nexin 1; cd07281"
                     /db_xref="CDD:132814"
     Site            order(186..188,238)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132814"
     Region          286..506
                     /region_name="BAR"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain, a
                     dimerization module that binds membranes and detects
                     membrane curvature; cl12013"
                     /db_xref="CDD:472257"
     Site            order(315,318..319,323,325..326,329..330,332..333,
                     343..344,346..347,350..351,353..354,357,370,373..374,479,
                     482..483,485,490,493..494,496..497,500..501,504..505)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153349"
     CDS             1..508
                     /gene="SNX1"
                     /coded_by="XM_061157339.1:109..1635"
                     /db_xref="GeneID:133066347"
ORIGIN      
        1 masggggcsa serlpppfpg lepesegavg gsepeagdsd tegediftga aavskpqspk
       61 riasllpins gskengihge qdqepqdlfa datvelslds tqnnqkkvpa ktlislppqe
      121 atnsskpqps yeeleeeeqe dqfdltvgit dpekigdgmn ayvaykvttq tslpmfrskh
      181 favkrrfsdf lglyeklsek hsqngfivpp ppeksligmt kvkvgkedss saeflekrra
      241 alerylqriv nhptmlqdpd vreflekeel pravgtqtls gagllkmfnk atdavskmti
      301 kmnesdiwfe eklqevecee qrlrklhavv etlvnhrkel alntaqfaks lamlgssedn
      361 talsralsql aeveekieql hqeqanndff llaellsdyi rllaivraaf dqrmktwqrw
      421 qdaqatlqkk reaearllwa nkpdklqqak deivewesrv tqyerdferi stvvrkevir
      481 fekekskdfr nhvikyletl lcsqqqpp
//
LOCUS       XP_061013323             216 aa            linear   MAM 02-DEC-2023
DEFINITION  peptidyl-prolyl cis-trans isomerase B [Dama dama].
ACCESSION   XP_061013323
VERSION     XP_061013323.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157340.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..216
                     /product="peptidyl-prolyl cis-trans isomerase B"
                     /calculated_mol_wt=23654
     Region          45..203
                     /region_name="cyclophilin_ABH_like"
                     /note="Cyclophilin A, B and H-like cyclophilin-type
                     peptidylprolyl cis- trans isomerase (PPIase) domain. This
                     family represents the archetypal cystolic cyclophilin
                     similar to human cyclophilins A, B and H. PPIase is an
                     enzyme which accelerates protein folding...; cd01926"
                     /db_xref="CDD:238907"
     Site            order(94..95,100,151,153,161)
                     /site_type="active"
                     /db_xref="CDD:238907"
     CDS             1..216
                     /gene="PPIB"
                     /coded_by="XM_061157340.1:51..701"
                     /db_xref="GeneID:133066348"
ORIGIN      
        1 mlrlsernmk vlfvvalvvg svfflllpgp saadekkkgp kvtvkvyfdl rigdedigrv
       61 viglfgktvp ktvdnfvala tgekgfgykd srfhrvikdf miqggdftrg dgtggksiyg
      121 erfpdenfkl khygpgwvsm anagkdtngs qffittvkta wldgkhvvfg kvlegmdvvr
      181 kvestktdgr dkplkdvtia dcgkievekp faiake
//
LOCUS       XP_061013324             182 aa            linear   MAM 02-DEC-2023
DEFINITION  sorting nexin-22 isoform X1 [Dama dama].
ACCESSION   XP_061013324
VERSION     XP_061013324.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157341.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..182
                     /product="sorting nexin-22 isoform X1"
                     /calculated_mol_wt=20884
     Region          2..116
                     /region_name="PX_SNX22"
                     /note="The phosphoinositide binding Phox Homology domain
                     of Sorting Nexin 22; cd06880"
                     /db_xref="CDD:132790"
     Site            order(43..45,66..67,79)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132790"
     CDS             1..182
                     /gene="SNX22"
                     /coded_by="XM_061157341.1:48..596"
                     /db_xref="GeneID:133066349"
ORIGIN      
        1 mlevhipsvg peaegtrqnp ekghmvfrve vlyrgrrhvv qrrysefhal hkrikklykv
       61 pdfpskrlpn wrtrrleqrr qgleayiqgi lylnqdvpke lleflslrhw ptdpkagnwg
      121 sqlyhrpvvn fpidpyicip speplpnmvv lgvlqglygf nastaeaqpe aachpapmpp
      181 tp
//
LOCUS       XP_061013325             147 aa            linear   MAM 02-DEC-2023
DEFINITION  sorting nexin-22 isoform X2 [Dama dama].
ACCESSION   XP_061013325
VERSION     XP_061013325.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157342.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..147
                     /product="sorting nexin-22 isoform X2"
                     /calculated_mol_wt=16517
     Region          2..81
                     /region_name="PX_domain"
                     /note="The Phox Homology domain, a phosphoinositide
                     binding module; cl02563"
                     /db_xref="CDD:470617"
     CDS             1..147
                     /gene="SNX22"
                     /coded_by="XM_061157342.1:48..491"
                     /db_xref="GeneID:133066349"
ORIGIN      
        1 mlevhipsvg peaegtrqnp ekghmvfrve vlyrgrrhvv qrrysefhal hkrgilylnq
       61 dvpkellefl slrhwptdpk agnwgsqlyh rpvvnfpidp yicipspepl pnmvvlgvlq
      121 glygfnasta eaqpeaachp apmpptp
//
LOCUS       XP_061013326             457 aa            linear   MAM 02-DEC-2023
DEFINITION  casein kinase I isoform X1 [Dama dama].
ACCESSION   XP_061013326
VERSION     XP_061013326.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157343.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..457
                     /product="casein kinase I isoform X1"
                     /calculated_mol_wt=52461
     Region          42..330
                     /region_name="STKc_CK1_gamma"
                     /note="Catalytic domain of the Serine/Threonine protein
                     kinase, Casein Kinase 1 gamma; cd14126"
                     /db_xref="CDD:271028"
     Site            order(49..55,57,70,72,117..121,123,125,163,165,167..168,
                     170,186,189,212..215)
                     /site_type="active"
                     /db_xref="CDD:271028"
     Site            order(49..55,57,70,72,117..121,165,167..168,170,186)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271028"
     Site            order(53,123,125,163,165,167,189,212..215)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271028"
     Site            185..215
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271028"
     Region          330..427
                     /region_name="CK1gamma_C"
                     /note="Casein kinase 1 gamma C terminal; pfam12605"
                     /db_xref="CDD:463640"
     CDS             1..457
                     /gene="CSNK1G1"
                     /coded_by="XM_061157343.1:412..1785"
                     /db_xref="GeneID:133066350"
ORIGIN      
        1 mdhpsrekde rqrttkpmaq rrehcsrpsg stssgvlmvg pnfrvgkkig cgnfgelrlg
       61 knlytneyva iklepiksra pqlhleyrfy kqlgsagegl pqvyyfgpcg kynamvlell
      121 gpsledlfdl cdrtftlktv lmiaiqllsr meyvhsknli yrdvkpenfl igrqgnkkeh
      181 vihiidfgla keyidpetkk hipyrehksl tgtarymsin thlgkeqsrr ddlealghmf
      241 myflrgslpw qglkadtlke ryqkigdtkr ntpiealcen fpeematylr yvrrldffek
      301 pdyeylrtlf tdlferkgyt fdyaydwvgr piptpvgsvh vdsgasaitr eshthrdrps
      361 qqplrnqtas serrgeweiq psrqtntsyl tshlaadrhg gsvqvvsstn gelnvddptg
      421 ahsnapitah aevevveeak cccffkrkrk kttqrhk
//
LOCUS       XP_061013327             457 aa            linear   MAM 02-DEC-2023
DEFINITION  casein kinase I isoform X1 [Dama dama].
ACCESSION   XP_061013327
VERSION     XP_061013327.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157344.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..457
                     /product="casein kinase I isoform X1"
                     /calculated_mol_wt=52461
     Region          42..330
                     /region_name="STKc_CK1_gamma"
                     /note="Catalytic domain of the Serine/Threonine protein
                     kinase, Casein Kinase 1 gamma; cd14126"
                     /db_xref="CDD:271028"
     Site            order(49..55,57,70,72,117..121,123,125,163,165,167..168,
                     170,186,189,212..215)
                     /site_type="active"
                     /db_xref="CDD:271028"
     Site            order(49..55,57,70,72,117..121,165,167..168,170,186)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271028"
     Site            order(53,123,125,163,165,167,189,212..215)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271028"
     Site            185..215
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271028"
     Region          330..427
                     /region_name="CK1gamma_C"
                     /note="Casein kinase 1 gamma C terminal; pfam12605"
                     /db_xref="CDD:463640"
     CDS             1..457
                     /gene="CSNK1G1"
                     /coded_by="XM_061157344.1:524..1897"
                     /db_xref="GeneID:133066350"
ORIGIN      
        1 mdhpsrekde rqrttkpmaq rrehcsrpsg stssgvlmvg pnfrvgkkig cgnfgelrlg
       61 knlytneyva iklepiksra pqlhleyrfy kqlgsagegl pqvyyfgpcg kynamvlell
      121 gpsledlfdl cdrtftlktv lmiaiqllsr meyvhsknli yrdvkpenfl igrqgnkkeh
      181 vihiidfgla keyidpetkk hipyrehksl tgtarymsin thlgkeqsrr ddlealghmf
      241 myflrgslpw qglkadtlke ryqkigdtkr ntpiealcen fpeematylr yvrrldffek
      301 pdyeylrtlf tdlferkgyt fdyaydwvgr piptpvgsvh vdsgasaitr eshthrdrps
      361 qqplrnqtas serrgeweiq psrqtntsyl tshlaadrhg gsvqvvsstn gelnvddptg
      421 ahsnapitah aevevveeak cccffkrkrk kttqrhk
//
LOCUS       XP_061013328             457 aa            linear   MAM 02-DEC-2023
DEFINITION  casein kinase I isoform X1 [Dama dama].
ACCESSION   XP_061013328
VERSION     XP_061013328.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157345.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..457
                     /product="casein kinase I isoform X1"
                     /calculated_mol_wt=52461
     Region          42..330
                     /region_name="STKc_CK1_gamma"
                     /note="Catalytic domain of the Serine/Threonine protein
                     kinase, Casein Kinase 1 gamma; cd14126"
                     /db_xref="CDD:271028"
     Site            order(49..55,57,70,72,117..121,123,125,163,165,167..168,
                     170,186,189,212..215)
                     /site_type="active"
                     /db_xref="CDD:271028"
     Site            order(49..55,57,70,72,117..121,165,167..168,170,186)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271028"
     Site            order(53,123,125,163,165,167,189,212..215)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271028"
     Site            185..215
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271028"
     Region          330..427
                     /region_name="CK1gamma_C"
                     /note="Casein kinase 1 gamma C terminal; pfam12605"
                     /db_xref="CDD:463640"
     CDS             1..457
                     /gene="CSNK1G1"
                     /coded_by="XM_061157345.1:461..1834"
                     /db_xref="GeneID:133066350"
ORIGIN      
        1 mdhpsrekde rqrttkpmaq rrehcsrpsg stssgvlmvg pnfrvgkkig cgnfgelrlg
       61 knlytneyva iklepiksra pqlhleyrfy kqlgsagegl pqvyyfgpcg kynamvlell
      121 gpsledlfdl cdrtftlktv lmiaiqllsr meyvhsknli yrdvkpenfl igrqgnkkeh
      181 vihiidfgla keyidpetkk hipyrehksl tgtarymsin thlgkeqsrr ddlealghmf
      241 myflrgslpw qglkadtlke ryqkigdtkr ntpiealcen fpeematylr yvrrldffek
      301 pdyeylrtlf tdlferkgyt fdyaydwvgr piptpvgsvh vdsgasaitr eshthrdrps
      361 qqplrnqtas serrgeweiq psrqtntsyl tshlaadrhg gsvqvvsstn gelnvddptg
      421 ahsnapitah aevevveeak cccffkrkrk kttqrhk
//
LOCUS       XP_061013329             420 aa            linear   MAM 02-DEC-2023
DEFINITION  casein kinase I isoform X2 [Dama dama].
ACCESSION   XP_061013329
VERSION     XP_061013329.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157346.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..420
                     /product="casein kinase I isoform X2"
                     /calculated_mol_wt=48364
     Region          42..330
                     /region_name="STKc_CK1_gamma"
                     /note="Catalytic domain of the Serine/Threonine protein
                     kinase, Casein Kinase 1 gamma; cd14126"
                     /db_xref="CDD:271028"
     Site            order(49..55,57,70,72,117..121,123,125,163,165,167..168,
                     170,186,189,212..215)
                     /site_type="active"
                     /db_xref="CDD:271028"
     Site            order(49..55,57,70,72,117..121,165,167..168,170,186)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271028"
     Site            order(53,123,125,163,165,167,189,212..215)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271028"
     Site            185..215
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271028"
     Region          330..390
                     /region_name="CK1gamma_C"
                     /note="Casein kinase 1 gamma C terminal; pfam12605"
                     /db_xref="CDD:463640"
     CDS             1..420
                     /gene="CSNK1G1"
                     /coded_by="XM_061157346.1:412..1674"
                     /db_xref="GeneID:133066350"
ORIGIN      
        1 mdhpsrekde rqrttkpmaq rrehcsrpsg stssgvlmvg pnfrvgkkig cgnfgelrlg
       61 knlytneyva iklepiksra pqlhleyrfy kqlgsagegl pqvyyfgpcg kynamvlell
      121 gpsledlfdl cdrtftlktv lmiaiqllsr meyvhsknli yrdvkpenfl igrqgnkkeh
      181 vihiidfgla keyidpetkk hipyrehksl tgtarymsin thlgkeqsrr ddlealghmf
      241 myflrgslpw qglkadtlke ryqkigdtkr ntpiealcen fpeematylr yvrrldffek
      301 pdyeylrtlf tdlferkgyt fdyaydwvgr piptpvgsvh vdsgasaitr eshthrdrps
      361 qqplrnqvvs stngelnvdd ptgahsnapi tahaevevve eakcccffkr krkkttqrhk
//
LOCUS       XP_061013330             390 aa            linear   MAM 02-DEC-2023
DEFINITION  casein kinase I isoform X3 [Dama dama].
ACCESSION   XP_061013330
VERSION     XP_061013330.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157347.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..390
                     /product="casein kinase I isoform X3"
                     /calculated_mol_wt=45247
     Region          42..330
                     /region_name="STKc_CK1_gamma"
                     /note="Catalytic domain of the Serine/Threonine protein
                     kinase, Casein Kinase 1 gamma; cd14126"
                     /db_xref="CDD:271028"
     Site            order(49..55,57,70,72,117..121,123,125,163,165,167..168,
                     170,186,189,212..215)
                     /site_type="active"
                     /db_xref="CDD:271028"
     Site            order(49..55,57,70,72,117..121,165,167..168,170,186)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271028"
     Site            order(53,123,125,163,165,167,189,212..215)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271028"
     Site            185..215
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271028"
     Region          330..>369
                     /region_name="CK1gamma_C"
                     /note="Casein kinase 1 gamma C terminal; pfam12605"
                     /db_xref="CDD:463640"
     CDS             1..390
                     /gene="CSNK1G1"
                     /coded_by="XM_061157347.1:412..1584"
                     /db_xref="GeneID:133066350"
ORIGIN      
        1 mdhpsrekde rqrttkpmaq rrehcsrpsg stssgvlmvg pnfrvgkkig cgnfgelrlg
       61 knlytneyva iklepiksra pqlhleyrfy kqlgsagegl pqvyyfgpcg kynamvlell
      121 gpsledlfdl cdrtftlktv lmiaiqllsr meyvhsknli yrdvkpenfl igrqgnkkeh
      181 vihiidfgla keyidpetkk hipyrehksl tgtarymsin thlgkeqsrr ddlealghmf
      241 myflrgslpw qglkadtlke ryqkigdtkr ntpiealcen fpeematylr yvrrldffek
      301 pdyeylrtlf tdlferkgyt fdyaydwvgr piptpvgsvh vdsgasaitr eshthrdrps
      361 qqplrnqirk lrhrksedla qgptaskwws
//
LOCUS       XP_061013331             343 aa            linear   MAM 02-DEC-2023
DEFINITION  casein kinase I isoform X4 [Dama dama].
ACCESSION   XP_061013331
VERSION     XP_061013331.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157348.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..343
                     /product="casein kinase I isoform X4"
                     /calculated_mol_wt=39597
     Region          <1..216
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Region          216..313
                     /region_name="CK1gamma_C"
                     /note="Casein kinase 1 gamma C terminal; pfam12605"
                     /db_xref="CDD:463640"
     CDS             1..343
                     /gene="CSNK1G1"
                     /coded_by="XM_061157348.1:340..1371"
                     /db_xref="GeneID:133066350"
ORIGIN      
        1 mvlellgpsl edlfdlcdrt ftlktvlmia iqllsrmeyv hsknliyrdv kpenfligrq
       61 gnkkehvihi idfglakeyi dpetkkhipy rehksltgta rymsinthlg keqsrrddle
      121 alghmfmyfl rgslpwqglk adtlkeryqk igdtkrntpi ealcenfpee matylryvrr
      181 ldffekpdye ylrtlftdlf erkgytfdya ydwvgrpipt pvgsvhvdsg asaitresht
      241 hrdrpsqqpl rnqtasserr geweiqpsrq tntsyltshl aadrhggsvq vvsstngeln
      301 vddptgahsn apitahaeve vveeakcccf fkrkrkkttq rhk
//
LOCUS       XP_061013332             343 aa            linear   MAM 02-DEC-2023
DEFINITION  casein kinase I isoform X4 [Dama dama].
ACCESSION   XP_061013332
VERSION     XP_061013332.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157349.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..343
                     /product="casein kinase I isoform X4"
                     /calculated_mol_wt=39597
     Region          <1..216
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Region          216..313
                     /region_name="CK1gamma_C"
                     /note="Casein kinase 1 gamma C terminal; pfam12605"
                     /db_xref="CDD:463640"
     CDS             1..343
                     /gene="CSNK1G1"
                     /coded_by="XM_061157349.1:258..1289"
                     /db_xref="GeneID:133066350"
ORIGIN      
        1 mvlellgpsl edlfdlcdrt ftlktvlmia iqllsrmeyv hsknliyrdv kpenfligrq
       61 gnkkehvihi idfglakeyi dpetkkhipy rehksltgta rymsinthlg keqsrrddle
      121 alghmfmyfl rgslpwqglk adtlkeryqk igdtkrntpi ealcenfpee matylryvrr
      181 ldffekpdye ylrtlftdlf erkgytfdya ydwvgrpipt pvgsvhvdsg asaitresht
      241 hrdrpsqqpl rnqtasserr geweiqpsrq tntsyltshl aadrhggsvq vvsstngeln
      301 vddptgahsn apitahaeve vveeakcccf fkrkrkkttq rhk
//
LOCUS       XP_061013333             113 aa            linear   MAM 02-DEC-2023
DEFINITION  eukaryotic translation initiation factor 1-like [Dama dama].
ACCESSION   XP_061013333
VERSION     XP_061013333.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157350.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..113
                     /product="eukaryotic translation initiation factor 1-like"
                     /calculated_mol_wt=12800
     Region          5..113
                     /region_name="SUI1_MOF2"
                     /note="translation initiation factor SUI1, eukaryotic;
                     TIGR01160"
                     /db_xref="CDD:130228"
     Site            order(38,41..42,44,61,64..66,68..70,72,86,89)
                     /site_type="other"
                     /note="rRNA binding site [nucleotide binding]"
                     /db_xref="CDD:211318"
     Site            88..89
                     /site_type="other"
                     /note="Mutations affecting start-site selection"
                     /db_xref="CDD:211318"
     CDS             1..113
                     /gene="LOC133066351"
                     /coded_by="XM_061157350.1:693..1034"
                     /db_xref="GeneID:133066351"
ORIGIN      
        1 mstfqnlhsf dpfadaskgd dllpagtedy ihiriqqrng rktlttvqgi addydkkklv
       61 kvfrkkfayn gtvmehpeyg eviqlqgdqr knicqflvei glakddqlkv hgf
//
LOCUS       XP_061013334             111 aa            linear   MAM 02-DEC-2023
DEFINITION  PCNA-associated factor isoform X1 [Dama dama].
ACCESSION   XP_061013334
VERSION     XP_061013334.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157351.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..111
                     /product="PCNA-associated factor isoform X1"
                     /calculated_mol_wt=11819
     Region          1..110
                     /region_name="PAF"
                     /note="PCNA-associated factor histone like domain;
                     pfam15715"
                     /db_xref="CDD:464819"
     CDS             1..111
                     /gene="PCLAF"
                     /coded_by="XM_061157351.1:131..466"
                     /db_xref="GeneID:133066353"
ORIGIN      
        1 mvrtkadgvp gsyrkvvasr aprkvlgsst saanstplss rkaenkyagg npvcvrptpk
       61 wqkgigeffr lspkdseken ripeeagssg lgkakrkacp lppdhtddek e
//
LOCUS       XP_061013335              65 aa            linear   MAM 02-DEC-2023
DEFINITION  PCNA-associated factor isoform X2 [Dama dama].
ACCESSION   XP_061013335
VERSION     XP_061013335.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157352.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..65
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..65
                     /product="PCNA-associated factor isoform X2"
                     /calculated_mol_wt=7045
     Region          1..>42
                     /region_name="PAF"
                     /note="PCNA-associated factor histone like domain;
                     pfam15715"
                     /db_xref="CDD:464819"
     CDS             1..65
                     /gene="PCLAF"
                     /coded_by="XM_061157352.1:137..334"
                     /db_xref="GeneID:133066353"
ORIGIN      
        1 mvrtkadgvp gsyrkvvasr aprkvlgsst saanstplss rkehvlchli tqmmkknrtf
       61 lftld
//
LOCUS       XP_061013336             579 aa            linear   MAM 02-DEC-2023
DEFINITION  activating signal cointegrator 1 [Dama dama].
ACCESSION   XP_061013336
VERSION     XP_061013336.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157353.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..579
                     /product="activating signal cointegrator 1"
                     /calculated_mol_wt=65588
     Region          165..211
                     /region_name="zf-C2HC5"
                     /note="Putative zinc finger motif, C2HC5-type; pfam06221"
                     /db_xref="CDD:428833"
     Region          431..545
                     /region_name="ASCH_ASC-1_like"
                     /note="ASC-1 homology domain, ASC-1-like subfamily. The
                     ASCH domain, a small beta-barrel domain found in all three
                     kingdoms of life, resembles the RNA-binding PUA domain and
                     may also interact with RNA. ASCH has been proposed to
                     function as an RNA-binding domain...; cd06554"
                     /db_xref="CDD:119346"
     CDS             1..579
                     /gene="TRIP4"
                     /coded_by="XM_061157353.1:96..1835"
                     /db_xref="GeneID:133066354"
ORIGIN      
        1 mavagaasrq llvgwctqql rksfgldvse eivqyvlsie saeeireyvt dllqgnegkk
       61 gqfieelvtk wqkndqelts dtlqqsfkkd egqrsgdqlk rsrrkgrnkq eapaftepdt
      121 ttevktpfdl akaqdssssl kkktkfvsly tkegqdklav lipgrhpcdc lgqkhklinn
      181 clicgrivce qegsgpclfc gslvctheer dilqrdsnks qkllkklmsg tensgkvdis
      241 tkdllphqel rfksglekai khkdkllefd rtsirrtqvi ddesdyfasd snqwlskier
      301 eaiqkreeel refrhasrls kkitidfagr kivededpla eyhskldeai haiangtlnq
      361 pltkldrsse eplgllvnpn lyqpppqwid qtgaasqkka lhpagsglef sscrhqfriq
      421 dqefqegfdg gwclsmhqpw asllvrgikr vegrswytph rgrlwiaata krpspqevse
      481 lqttylflrg kdvefpndyp sgcllgcvdl idclsqkqfk dqypdmsqee sdspfvfict
      541 npqemivkfp ikgnpkiwkl dskihqgakk glmkqnkag
//
LOCUS       XP_061013338            1411 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 609 isoform X1 [Dama dama].
ACCESSION   XP_061013338
VERSION     XP_061013338.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157355.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1411
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1411
                     /product="zinc finger protein 609 isoform X1"
                     /calculated_mol_wt=150955
     Region          <412..533
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     CDS             1..1411
                     /gene="ZNF609"
                     /coded_by="XM_061157355.1:236..4471"
                     /db_xref="GeneID:133066355"
ORIGIN      
        1 mslssgasgg kgvdanpvet ydsgdewdig vgnliidlda dlekdqqkle msgskevgip
       61 apnavatlpd nikfvtpvpg pqgkegksks krnksgkdts kptpgtslft psegaaskke
      121 vqgrsgdgan agslvaaiap kgsekaakas rsvagskkek enssskskke rsegvgtcae
      181 kdpgvlqpvp lggrggqydg sagvdpgave plgsiaiepg aalnplgakp epeegenecr
      241 plkkvksekm espvstpavl plhllvpvvn ndisspceqi mvrtrsvgvn tcdvalatep
      301 eclgpcepgt svnlegivwq etedgmlvvn vtwrnktyvg tlldctrhdw apprfcdspt
      361 sdlemrngrg rgkrmrpnsn tpvnetatas dskgtssnsk traganskgr rgsqnssehr
      421 ppasstsedv kaspssankr knkplsdmel nsssedskgs krvrtnsmgs atgplpgtkv
      481 eptvldrncp spvlidcphp ncnkkykhin glkyhqahah tdddskpead gdseygeept
      541 lhadlgscng asvsqkgsls parsatpkvr lvephspsps skfstkglck kklsgegdtd
      601 lgalsndgsd dgpsvmdets ndafdslerk cmekekckkp sslkpekips kslksarpia
      661 paippqqiyt fqtatftaas pgsssglttt vvqampnspq lkpiqpkptv mgepftvnpa
      721 ltpakdkkkk ekkkkesske lespltpgkv craeegkspf ressgdgmkm egllngssdp
      781 hqsrlasika eadkiysftd napspsiggs srldsttptq pmtplhvvtq ngaeassvkt
      841 nspaysdisd agedgegkvd svkskdpeql vkegakktlf ppqpqskdsp yyqgfesyys
      901 psyaqsspga lnpssqagve sqalktkkde epesiegkvk ndvceekkpe lssssqqpsv
      961 iqqrpnmymq slyynqyayv ppygysdqsy hthllstnsa yrqqyeeqqk rqsleqqqrg
     1021 ldkkaemglk ereaalkedw kqkpsipptl tkapsltdlv ksgpgkakep gadpaksvii
     1081 pklddssklp sqapeglkvk lseashlgke aseaktgadc grqaevdpil wyrqeaeprm
     1141 wtyvypakys diksederwk eerdrklkee rsrskdsvpk edgkestssd cklptseesr
     1201 lgskeprpsv hvpvsspltq hqsyipymhg ysysqsydps hpsyrgmpav mmqnypgsyl
     1261 pssysfspyg skvsggedtd karaspsvsc kssseskald ilqqhashyk sksptisdkt
     1321 sqerdrggcg vvggggscss vggagggers vdrprtspsq rlmsthhhhh hlgysllpaq
     1381 ynlpyaagls staivasqqg stpslypppr r
//
LOCUS       XP_061013339            1406 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 609 isoform X2 [Dama dama].
ACCESSION   XP_061013339
VERSION     XP_061013339.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157356.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1406
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1406
                     /product="zinc finger protein 609 isoform X2"
                     /calculated_mol_wt=150510
     Region          <412..533
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     CDS             1..1406
                     /gene="ZNF609"
                     /coded_by="XM_061157356.1:236..4456"
                     /db_xref="GeneID:133066355"
ORIGIN      
        1 mslssgasgg kgvdanpvet ydsgdewdig vgnliidlda dlekdqqkle msgskevgip
       61 apnavatlpd nikfvtpvpg pqgkegksks krnksgkdts kptpgtslft psegaaskke
      121 vqgrsgdgan agslvaaiap kgsekaakas rsvagskkek enssskskke rsegvgtcae
      181 kdpgvlqpvp lggrggqydg sagvdpgave plgsiaiepg aalnplgakp epeegenecr
      241 plkkvksekm espvstpavl plhllvpvvn ndisspceqi mvrtrsvgvn tcdvalatep
      301 eclgpcepgt svnlegivwq etedgmlvvn vtwrnktyvg tlldctrhdw apprfcdspt
      361 sdlemrngrg rgkrmrpnsn tpvnetatas dskgtssnsk traganskgr rgsqnssehr
      421 ppasstsedv kaspssankr knkplsdmel nsssedskgs krvrtnsmgs atgplpgtkv
      481 eptvldrncp spvlidcphp ncnkkykhin glkyhqahah tdddskpead gdseygeept
      541 lhadlgscng asvsqkgsls parsatpkvr lvephspsps skfstkglck kklsgegdtd
      601 lgalsndgsd dgpsvmdets ndafdslerk cmekekckkp sslkpekips kslksarpia
      661 paippqqiyt fqtatftaas pgsssglttt vvqampnspq lkpiqpkptv mgepftvnpa
      721 ltpakdkkkk ekkkkesske lespltpgkv craeegkspf ressgdgmkm egllngssdp
      781 hqsrlasika eadkiysftd napspsiggs srldsttptq pmtplhvvtq ngaeassvkt
      841 nspaysdisd agedgegkvd svkskdpeql vkegakktlf ppqpqskdsp yyqgfesyys
      901 psyaqsspga lnpssqagve sqalktkkde epesiegkvk ndvceekkpe lssssqqpsv
      961 iqqrpnmymq slyynqyayv ppygysdqsy hthllstnsa yrqqyeeqqk rqsleqqqrg
     1021 ldkkaemglk ereaalkedw kqkpsipptl tkapsltdlv ksgpgkakep gadpaksvii
     1081 pklddssklp sqapeglkvk lseashlgke aseaktgadc grqaevdpil wyrqeaeprm
     1141 wtyvypakys diksederwk eerdrklkee rsrskdsvpk edgkestssd cklptseesr
     1201 lgskeprpsv hvpvsspltq hqsyipymhg ysysqsydps hpsyrgmpav mmqnypgsyl
     1261 pssysfspyg skvsggedtd karaspsvsc kssseskald ilqqhashyk sksptisdkt
     1321 sqerdrggcg vvggggscss vggagggers vdrprtspsq rlmsthhhhh hlgysllpaq
     1381 ynlpyaaaiv asqqgstpsl yppprr
//
LOCUS       XP_061013340            1366 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 609 isoform X3 [Dama dama].
ACCESSION   XP_061013340
VERSION     XP_061013340.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157357.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1366
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1366
                     /product="zinc finger protein 609 isoform X3"
                     /calculated_mol_wt=146622
     Region          <412..533
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     CDS             1..1366
                     /gene="ZNF609"
                     /coded_by="XM_061157357.1:236..4336"
                     /db_xref="GeneID:133066355"
ORIGIN      
        1 mslssgasgg kgvdanpvet ydsgdewdig vgnliidlda dlekdqqkle msgskevgip
       61 apnavatlpd nikfvtpvpg pqgkegksks krnksgkdts kptpgtslft psegaaskke
      121 vqgrsgdgan agslvaaiap kgsekaakas rsvagskkek enssskskke rsegvgtcae
      181 kdpgvlqpvp lggrggqydg sagvdpgave plgsiaiepg aalnplgakp epeegenecr
      241 plkkvksekm espvstpavl plhllvpvvn ndisspceqi mvrtrsvgvn tcdvalatep
      301 eclgpcepgt svnlegivwq etedgmlvvn vtwrnktyvg tlldctrhdw apprfcdspt
      361 sdlemrngrg rgkrmrpnsn tpvnetatas dskgtssnsk traganskgr rgsqnssehr
      421 ppasstsedv kaspssankr knkplsdmel nsssedskgs krvrtnsmgs atgplpgtkv
      481 eptvldrncp spvlidcphp ncnkkykhin glkyhqahah tdddskpead gdseygeept
      541 lhadlgscng asvsqkgsls parsatpkvr lvephspsps skfstkglck kklsgegdtd
      601 lgalsndgsd dgpsvmdets ndafdslerk cmekekckkp sslkpekips kslksarpia
      661 paippqqiyt fqtatftaas pgsssglttt vvqampnspq lkpiqpkptv mgepftvnpa
      721 ltpakdkkkk ekkkkesske lespltpgkv craeegkspf ressgdgmkm egllngssdp
      781 hqsrlasika eadkiysftd napspsiggs srldsttptq pmtplhvvtq ngaeassvkt
      841 nspaysdisd agedgegkvd svkskdpeql vkegakktlf ppqpqskdsp yyqgfesyys
      901 psyaqsspga lnpssqagve sqalktkkde epesiegkvk ndvceekkpe lssssqqpsv
      961 iqqrpnmymq slyynqyayv ppygysdqsy hthllstnsa yrqqyeeqqk rqsleqqqrg
     1021 ldkkaemglk ereaalkedw kqkpsipptl tkapsltdlv ksgpgkakep gadpaksvii
     1081 pklddssklp sqapeglkvk lseashlgke aseaktgadc grqaevdpil wyrqeaeprm
     1141 wtyvypakys diksederwk eerdrklkee rsrskdsvpk edgkestssd cklptseesr
     1201 lgskeprpsv hvpvsspltq hqsyipymhg ysysqsydps hpsyrgmpav mmqnypgsyl
     1261 pssysfspyg skvsggedtd karaspsvsc kssseskald ilqqhashyk sksptrlmst
     1321 hhhhhhlgys llpaqynlpy aaglsstaiv asqqgstpsl yppprr
//
LOCUS       XP_061013341            1361 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 609 isoform X4 [Dama dama].
ACCESSION   XP_061013341
VERSION     XP_061013341.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157358.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1361
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1361
                     /product="zinc finger protein 609 isoform X4"
                     /calculated_mol_wt=146176
     Region          <412..533
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     CDS             1..1361
                     /gene="ZNF609"
                     /coded_by="XM_061157358.1:236..4321"
                     /db_xref="GeneID:133066355"
ORIGIN      
        1 mslssgasgg kgvdanpvet ydsgdewdig vgnliidlda dlekdqqkle msgskevgip
       61 apnavatlpd nikfvtpvpg pqgkegksks krnksgkdts kptpgtslft psegaaskke
      121 vqgrsgdgan agslvaaiap kgsekaakas rsvagskkek enssskskke rsegvgtcae
      181 kdpgvlqpvp lggrggqydg sagvdpgave plgsiaiepg aalnplgakp epeegenecr
      241 plkkvksekm espvstpavl plhllvpvvn ndisspceqi mvrtrsvgvn tcdvalatep
      301 eclgpcepgt svnlegivwq etedgmlvvn vtwrnktyvg tlldctrhdw apprfcdspt
      361 sdlemrngrg rgkrmrpnsn tpvnetatas dskgtssnsk traganskgr rgsqnssehr
      421 ppasstsedv kaspssankr knkplsdmel nsssedskgs krvrtnsmgs atgplpgtkv
      481 eptvldrncp spvlidcphp ncnkkykhin glkyhqahah tdddskpead gdseygeept
      541 lhadlgscng asvsqkgsls parsatpkvr lvephspsps skfstkglck kklsgegdtd
      601 lgalsndgsd dgpsvmdets ndafdslerk cmekekckkp sslkpekips kslksarpia
      661 paippqqiyt fqtatftaas pgsssglttt vvqampnspq lkpiqpkptv mgepftvnpa
      721 ltpakdkkkk ekkkkesske lespltpgkv craeegkspf ressgdgmkm egllngssdp
      781 hqsrlasika eadkiysftd napspsiggs srldsttptq pmtplhvvtq ngaeassvkt
      841 nspaysdisd agedgegkvd svkskdpeql vkegakktlf ppqpqskdsp yyqgfesyys
      901 psyaqsspga lnpssqagve sqalktkkde epesiegkvk ndvceekkpe lssssqqpsv
      961 iqqrpnmymq slyynqyayv ppygysdqsy hthllstnsa yrqqyeeqqk rqsleqqqrg
     1021 ldkkaemglk ereaalkedw kqkpsipptl tkapsltdlv ksgpgkakep gadpaksvii
     1081 pklddssklp sqapeglkvk lseashlgke aseaktgadc grqaevdpil wyrqeaeprm
     1141 wtyvypakys diksederwk eerdrklkee rsrskdsvpk edgkestssd cklptseesr
     1201 lgskeprpsv hvpvsspltq hqsyipymhg ysysqsydps hpsyrgmpav mmqnypgsyl
     1261 pssysfspyg skvsggedtd karaspsvsc kssseskald ilqqhashyk sksptrlmst
     1321 hhhhhhlgys llpaqynlpy aaaivasqqg stpslypppr r
//
LOCUS       XP_061013342            1162 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 609 isoform X5 [Dama dama].
ACCESSION   XP_061013342
VERSION     XP_061013342.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157359.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1162
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1162
                     /product="zinc finger protein 609 isoform X5"
                     /calculated_mol_wt=125713
     Region          <248..284
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     CDS             1..1162
                     /gene="ZNF609"
                     /coded_by="XM_061157359.1:110..3598"
                     /db_xref="GeneID:133066355"
ORIGIN      
        1 mespvstpav lplhllvpvv nndisspceq imvrtrsvgv ntcdvalate peclgpcepg
       61 tsvnlegivw qetedgmlvv nvtwrnktyv gtlldctrhd wapprfcdsp tsdlemrngr
      121 grgkrmrpns ntpvnetata sdskgtssns ktraganskg rrgsqnsseh rppasstsed
      181 vkaspssank rknkplsdme lnsssedskg skrvrtnsmg satgplpgtk veptvldrnc
      241 pspvlidcph pncnkkykhi nglkyhqaha htdddskpea dgdseygeep tlhadlgscn
      301 gasvsqkgsl sparsatpkv rlvephspsp sskfstkglc kkklsgegdt dlgalsndgs
      361 ddgpsvmdet sndafdsler kcmekekckk psslkpekip skslksarpi apaippqqiy
      421 tfqtatftaa spgsssgltt tvvqampnsp qlkpiqpkpt vmgepftvnp altpakdkkk
      481 kekkkkessk elespltpgk vcraeegksp fressgdgmk megllngssd phqsrlasik
      541 aeadkiysft dnapspsigg ssrldsttpt qpmtplhvvt qngaeassvk tnspaysdis
      601 dagedgegkv dsvkskdpeq lvkegakktl fppqpqskds pyyqgfesyy spsyaqsspg
      661 alnpssqagv esqalktkkd eepesiegkv kndvceekkp elssssqqps viqqrpnmym
      721 qslyynqyay vppygysdqs yhthllstns ayrqqyeeqq krqsleqqqr gldkkaemgl
      781 kereaalked wkqkpsippt ltkapsltdl vksgpgkake pgadpaksvi ipklddsskl
      841 psqapeglkv klseashlgk easeaktgad cgrqaevdpi lwyrqeaepr mwtyvypaky
      901 sdiksederw keerdrklke ersrskdsvp kedgkestss dcklptsees rlgskeprps
      961 vhvpvssplt qhqsyipymh gysysqsydp shpsyrgmpa vmmqnypgsy lpssysfspy
     1021 gskvsggedt dkaraspsvs ckssseskal dilqqhashy ksksptisdk tsqerdrggc
     1081 gvvggggscs svggaggger svdrprtsps qrlmsthhhh hhlgysllpa qynlpyaagl
     1141 sstaivasqq gstpslyppp rr
//
LOCUS       XP_061013343             189 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: ornithine decarboxylase antizyme 2 [Dama
            dama].
ACCESSION   XP_061013343
VERSION     XP_061013343.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157360.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..189
                     /product="LOW QUALITY PROTEIN: ornithine decarboxylase
                     antizyme 2"
                     /calculated_mol_wt=20894
     Region          <100..181
                     /region_name="ODC_AZ"
                     /note="Ornithine decarboxylase antizyme; pfam02100"
                     /db_xref="CDD:460445"
     CDS             1..189
                     /gene="OAZ2"
                     /coded_by="XM_061157360.1:136..705"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /db_xref="GeneID:133066356"
ORIGIN      
        1 mintqdssil plsncpqlqc crhivpgplw csdaphplsk ipggrgggrd pslsaliykd
       61 ekltvtqdlp vndgkphivh fqyevtevkv sswdavlssq slfveipdgl ladgskegll
      121 allefaeekm kvnyvficfr kgredrapll ktfsflgfei vrpghpcvps rpdvmfmvyp
      181 ldqnlseed
//
LOCUS       XP_061013344             214 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA-binding protein with multiple splicing 2 isoform X1 [Dama
            dama].
ACCESSION   XP_061013344
VERSION     XP_061013344.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157361.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..214
                     /product="RNA-binding protein with multiple splicing 2
                     isoform X1"
                     /calculated_mol_wt=23401
     Region          35..110
                     /region_name="RRM_RBPMS2"
                     /note="RNA recognition motif (RRM) found in vertebrate
                     RNA-binding protein with multiple splicing 2 (RBP-MS2);
                     cd12683"
                     /db_xref="CDD:410084"
     CDS             1..214
                     /gene="RBPMS2"
                     /coded_by="XM_061157361.1:49..693"
                     /db_xref="GeneID:133066357"
ORIGIN      
        1 mtrergsagr wapsptsggl grrgargpfk kvrwvrtlfv sglpvdikpr elyllfrpfk
       61 gyegsliklt srqpvgfvif dsragaeaak nalngirfdp enpqtlrlef akantkmakn
      121 klmatpnptn ahpalgahfi ardpydlmga alipaspeaw apyplyttel tpaishtaft
      181 ypaataaaaa lhaqvrwyps sdttqpgwky rqfc
//
LOCUS       XP_061013345             214 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA-binding protein with multiple splicing 2 isoform X1 [Dama
            dama].
ACCESSION   XP_061013345
VERSION     XP_061013345.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157362.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..214
                     /product="RNA-binding protein with multiple splicing 2
                     isoform X1"
                     /calculated_mol_wt=23401
     Region          35..110
                     /region_name="RRM_RBPMS2"
                     /note="RNA recognition motif (RRM) found in vertebrate
                     RNA-binding protein with multiple splicing 2 (RBP-MS2);
                     cd12683"
                     /db_xref="CDD:410084"
     CDS             1..214
                     /gene="RBPMS2"
                     /coded_by="XM_061157362.1:47..691"
                     /db_xref="GeneID:133066357"
ORIGIN      
        1 mtrergsagr wapsptsggl grrgargpfk kvrwvrtlfv sglpvdikpr elyllfrpfk
       61 gyegsliklt srqpvgfvif dsragaeaak nalngirfdp enpqtlrlef akantkmakn
      121 klmatpnptn ahpalgahfi ardpydlmga alipaspeaw apyplyttel tpaishtaft
      181 ypaataaaaa lhaqvrwyps sdttqpgwky rqfc
//
LOCUS       XP_061013346             207 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA-binding protein with multiple splicing 2 isoform X2 [Dama
            dama].
ACCESSION   XP_061013346
VERSION     XP_061013346.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157363.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..207
                     /product="RNA-binding protein with multiple splicing 2
                     isoform X2"
                     /calculated_mol_wt=22233
     Region          28..103
                     /region_name="RRM_RBPMS2"
                     /note="RNA recognition motif (RRM) found in vertebrate
                     RNA-binding protein with multiple splicing 2 (RBP-MS2);
                     cd12683"
                     /db_xref="CDD:410084"
     CDS             1..207
                     /gene="RBPMS2"
                     /coded_by="XM_061157363.1:282..905"
                     /db_xref="GeneID:133066357"
ORIGIN      
        1 msnlkpdgeh stgagtgags ggaleeevrt lfvsglpvdi kprelyllfr pfkgyegsli
       61 kltsrqpvgf vifdsragae aaknalngir fdpenpqtlr lefakantkm aknklmatpn
      121 ptnahpalga hfiardpydl mgaalipasp eawapyplyt teltpaisht aftypaataa
      181 aaalhaqvrw ypssdttqpg wkyrqfc
//
LOCUS       XP_061013347             645 aa            linear   MAM 02-DEC-2023
DEFINITION  ATP-dependent DNA helicase PIF1 isoform X1 [Dama dama].
ACCESSION   XP_061013347
VERSION     XP_061013347.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157364.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..645
                     /product="ATP-dependent DNA helicase PIF1 isoform X1"
                     /calculated_mol_wt=69968
     Region          <41..>193
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          207..508
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            order(211,229..236,310,350)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350795"
     Region          <521..615
                     /region_name="Herpes_Helicase"
                     /note="Helicase; cl28079"
                     /db_xref="CDD:332900"
     Region          <552..597
                     /region_name="SF1_C_RecD"
                     /note="C-terminal helicase domain of RecD family
                     helicases; cd18809"
                     /db_xref="CDD:350196"
     Site            563
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350196"
     CDS             1..645
                     /gene="PIF1"
                     /coded_by="XM_061157364.1:141..2078"
                     /db_xref="GeneID:133066359"
ORIGIN      
        1 mlpgtqaaaa ecedgelrcr vaveelspgg qarrrqslrt aelslgrner relmlrlqap
       61 gpagrprcfp vraarlftrf aaagrstlrl aadstprasa vqlllsdcpp drlrrflrtl
      121 rlklaaapgp gpasartqll gprprdfvgi spvqpeelrr vaatrvtdtt pvkrptepra
      181 gakpstevtr wplpvkrlrl pptkpelske qaavlravlk gqsifftgsa gtgksyllkr
      241 ilgslpptgt vatastgvaa chiggttlha favsltgigs gqaplaqcva laqrpgvrqg
      301 wlncqrlvid eismveadlf dkleavarav rqqnkpfggi qliicgdflq lppvtkgsql
      361 pqfcfqaksw rrcvpvtlel tevwrqtdkt fisllqavrl grcsdevtrq lrataahkvg
      421 rdgivatrlc thqddvaltn erqlqelpge vhsfeamdsd peqartldaq cpvsqllqlk
      481 lgaqvmlvkn lavsrglvng argvvvgfea egrglpqvrf lcgvtevira drwtvqttgg
      541 hllsrqqlpl qlawaisihk sqgmsldcve mslgrvfasg qayvalsrar slqglrvldf
      601 dpmvvrcdpr vlsfyatlrq ngalslespd deegtsdqen vdpnl
//
LOCUS       XP_061013348             641 aa            linear   MAM 02-DEC-2023
DEFINITION  ATP-dependent DNA helicase PIF1 isoform X2 [Dama dama].
ACCESSION   XP_061013348
VERSION     XP_061013348.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157365.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..641
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..641
                     /product="ATP-dependent DNA helicase PIF1 isoform X2"
                     /calculated_mol_wt=69567
     Region          <41..>193
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          207..504
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            order(211,229..236,306,346)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350795"
     Region          <517..611
                     /region_name="Herpes_Helicase"
                     /note="Helicase; cl28079"
                     /db_xref="CDD:332900"
     Region          <548..593
                     /region_name="SF1_C_RecD"
                     /note="C-terminal helicase domain of RecD family
                     helicases; cd18809"
                     /db_xref="CDD:350196"
     Site            559
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350196"
     CDS             1..641
                     /gene="PIF1"
                     /coded_by="XM_061157365.1:141..2066"
                     /db_xref="GeneID:133066359"
ORIGIN      
        1 mlpgtqaaaa ecedgelrcr vaveelspgg qarrrqslrt aelslgrner relmlrlqap
       61 gpagrprcfp vraarlftrf aaagrstlrl aadstprasa vqlllsdcpp drlrrflrtl
      121 rlklaaapgp gpasartqll gprprdfvgi spvqpeelrr vaatrvtdtt pvkrptepra
      181 gakpstevtr wplpvkrlrl pptkpelske qaavlravlk gqsifftgsa gtgksyllkr
      241 ilgslpptgt vatastgvaa chiggttlha fagigsgqap laqcvalaqr pgvrqgwlnc
      301 qrlvideism veadlfdkle avaravrqqn kpfggiqlii cgdflqlppv tkgsqlpqfc
      361 fqakswrrcv pvtleltevw rqtdktfisl lqavrlgrcs devtrqlrat aahkvgrdgi
      421 vatrlcthqd dvaltnerql qelpgevhsf eamdsdpeqa rtldaqcpvs qllqlklgaq
      481 vmlvknlavs rglvngargv vvgfeaegrg lpqvrflcgv teviradrwt vqttgghlls
      541 rqqlplqlaw aisihksqgm sldcvemslg rvfasgqayv alsrarslqg lrvldfdpmv
      601 vrcdprvlsf yatlrqngal slespddeeg tsdqenvdpn l
//
LOCUS       XP_061013349             606 aa            linear   MAM 02-DEC-2023
DEFINITION  ATP-dependent DNA helicase PIF1 isoform X3 [Dama dama].
ACCESSION   XP_061013349
VERSION     XP_061013349.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157366.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..606
                     /product="ATP-dependent DNA helicase PIF1 isoform X3"
                     /calculated_mol_wt=65849
     Region          <41..>193
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          207..469
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            order(211,229..236,311)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350795"
     Region          <482..576
                     /region_name="Herpes_Helicase"
                     /note="Helicase; cl28079"
                     /db_xref="CDD:332900"
     Region          <513..558
                     /region_name="SF1_C_RecD"
                     /note="C-terminal helicase domain of RecD family
                     helicases; cd18809"
                     /db_xref="CDD:350196"
     Site            524
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350196"
     CDS             1..606
                     /gene="PIF1"
                     /coded_by="XM_061157366.1:141..1961"
                     /db_xref="GeneID:133066359"
ORIGIN      
        1 mlpgtqaaaa ecedgelrcr vaveelspgg qarrrqslrt aelslgrner relmlrlqap
       61 gpagrprcfp vraarlftrf aaagrstlrl aadstprasa vqlllsdcpp drlrrflrtl
      121 rlklaaapgp gpasartqll gprprdfvgi spvqpeelrr vaatrvtdtt pvkrptepra
      181 gakpstevtr wplpvkrlrl pptkpelske qaavlravlk gqsifftgsa gtgksyllkr
      241 ilgslpptgt vatastgvaa chiggttlha fadgtqppqt lehpallcra vrqqnkpfgg
      301 iqliicgdfl qlppvtkgsq lpqfcfqaks wrrcvpvtle ltevwrqtdk tfisllqavr
      361 lgrcsdevtr qlrataahkv grdgivatrl cthqddvalt nerqlqelpg evhsfeamds
      421 dpeqartlda qcpvsqllql klgaqvmlvk nlavsrglvn gargvvvgfe aegrglpqvr
      481 flcgvtevir adrwtvqttg ghllsrqqlp lqlawaisih ksqgmsldcv emslgrvfas
      541 gqayvalsra rslqglrvld fdpmvvrcdp rvlsfyatlr qngalslesp ddeegtsdqe
      601 nvdpnl
//
LOCUS       XP_061013350             503 aa            linear   MAM 02-DEC-2023
DEFINITION  pleckstrin homology domain-containing family O member 2 [Dama
            dama].
ACCESSION   XP_061013350
VERSION     XP_061013350.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157367.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..503
                     /product="pleckstrin homology domain-containing family O
                     member 2"
                     /calculated_mol_wt=54631
     Region          16..114
                     /region_name="PH_PLEKHO1_PLEKHO2"
                     /note="Pleckstrin homology domain-containing family O
                     Pleckstrin homology domain; cd13317"
                     /db_xref="CDD:270127"
     Region          <163..>395
                     /region_name="PRK07003"
                     /note="DNA polymerase III subunit gamma/tau"
                     /db_xref="CDD:235906"
     CDS             1..503
                     /gene="PLEKHO2"
                     /coded_by="XM_061157367.1:122..1633"
                     /db_xref="GeneID:133066360"
ORIGIN      
        1 meeegvkegg qkprsaqtvd kagwikkssg gflglwkdry lllcqaqllv yenedeqkcv
       61 etvelgsyek cqdlrallkr khrfillrsp gnkvsdikfq apsgeekesw ikalneginr
      121 gknkafdevk vdkscvlehv trdrvrrdqr rrpptrvhlk evanaasdgl srldldvpns
      181 gppvlapsnd vdaaqpretp retprppmpp akpspapets sagdrmetpv gqsaptpvpa
      241 steahpesre dsetpvveds dseqppnrml pdklkvswen pspeeapdse saeppqelga
      301 etsetgpreg gkpptpppki lseklkasms gveasgpaqs pgaseasapg paevsvngvd
      361 dspeplqssq aagppgtppk dattstalpp wdpqpqfhpr csslgdllge gprrrrqpge
      421 qlhraqlevk vasektekll nkvlggesas mnaetllsqa veqlrqatqv lqeirdleem
      481 sqeapglrek rrelvtlyrr sap
//
LOCUS       XP_061013351             361 aa            linear   MAM 02-DEC-2023
DEFINITION  prostaglandin D2 receptor [Dama dama].
ACCESSION   XP_061013351
VERSION     XP_061013351.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157368.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..361
                     /product="prostaglandin D2 receptor"
                     /calculated_mol_wt=40555
     Region          17..335
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          19..43
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320268"
     Region          62..84
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320268"
     Region          106..128
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320268"
     Region          151..167
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320268"
     Region          196..219
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320268"
     Region          264..286
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320268"
     Region          302..327
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320268"
     CDS             1..361
                     /gene="PTGDR"
                     /coded_by="XM_061157368.1:174..1259"
                     /db_xref="GeneID:133066362"
ORIGIN      
        1 mrplfyrchn ttsvekgnsa tmgwllfstg lvgnllalgl larsglgscp prpprpppsv
       61 fyvlvfglti tdllgkclvs pfvlsayaqn rslrgllpgs dsslcqafaf fmsffglast
      121 lqllamalec wlslghpffy rrhltprrga mvapvvgafc lafcalpfvg fgkfvqycpg
      181 twcffqmvhe erslpvlsys vlyaslmlll vlaivlcnls amrnlyamhr rlrrllrpgp
      241 reraepgage reatplhlee ldhllllalm tvlftmcslp liyrayygaf kavpeqngta
      301 eeiedlralr flsvisivdp wifiifrtsv frmffhkifi rpliyrnwhs nscqtnmess
      361 l
//
LOCUS       XP_061013352            1304 aa            linear   MAM 02-DEC-2023
DEFINITION  nidogen-2 [Dama dama].
ACCESSION   XP_061013352
VERSION     XP_061013352.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157369.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1304
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1304
                     /product="nidogen-2"
                     /calculated_mol_wt=142466
     Region          107..273
                     /region_name="NIDO"
                     /note="Extracellular domain of unknown function in nidogen
                     (entactin) and hypothetical proteins; smart00539"
                     /db_xref="CDD:214712"
     Region          496..531
                     /region_name="EGF_3"
                     /note="EGF domain; pfam12947"
                     /db_xref="CDD:463759"
     Region          535..759
                     /region_name="nidG2"
                     /note="Nidogen, G2 domain; Nidogen is an important
                     component of the basement membrane, an extracellular
                     sheet-like matrix. Nidogen is a multifunctional protein
                     that interacts with many other basement membrane proteins,
                     like collagen, perlecan, lamin, and has a...; cd00255"
                     /db_xref="CDD:238158"
     Site            order(539,563,565,572,574,576,740,745,749,751)
                     /site_type="other"
                     /note="collagen/perlecan interaction surface [polypeptide
                     binding]"
                     /db_xref="CDD:238158"
     Region          771..807
                     /region_name="EGF_3"
                     /note="EGF domain; pfam12947"
                     /db_xref="CDD:463759"
     Region          809..851
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(809,812,828)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          860..898
                     /region_name="EGF_3"
                     /note="EGF domain; pfam12947"
                     /db_xref="CDD:463759"
     Region          904..937
                     /region_name="EGF_3"
                     /note="EGF domain; pfam12947"
                     /db_xref="CDD:463759"
     Region          949..1014
                     /region_name="Thyroglobulin_1"
                     /note="Thyroglobulin type-1 repeat; pfam00086"
                     /db_xref="CDD:459665"
     Site            order(953,968,986,990)
                     /site_type="active"
                     /note="protease interaction site [active]"
                     /db_xref="CDD:238114"
     Region          1064..1102
                     /region_name="LY"
                     /note="Low-density lipoprotein-receptor YWTD domain;
                     smart00135"
                     /db_xref="CDD:214531"
     Region          1108..1150
                     /region_name="LY"
                     /note="Low-density lipoprotein-receptor YWTD domain;
                     smart00135"
                     /db_xref="CDD:214531"
     Region          1151..1195
                     /region_name="LY"
                     /note="Low-density lipoprotein-receptor YWTD domain;
                     smart00135"
                     /db_xref="CDD:214531"
     Region          1196..1238
                     /region_name="LY"
                     /note="Low-density lipoprotein-receptor YWTD domain;
                     smart00135"
                     /db_xref="CDD:214531"
     CDS             1..1304
                     /gene="NID2"
                     /coded_by="XM_061157369.1:54..3968"
                     /db_xref="GeneID:133066364"
ORIGIN      
        1 mrgdpaagrp alppplllml llllsgaaal hpselfpygq srgdqllqeg ddessaavkl
       61 tlslrfydaq fsdlyvgtng iistqdfpre tqyvdddfpt dfpaiapfla didtsggrgr
      121 vlyrqdtspa vlglaasyvr agfplsgahf tpthaflatw eqvgayeeak rgappsgeln
      181 tfqavlasde sdtyalflyp anglqffgtr pkesynvqlq lparvgfcrg evddlnrqgp
      241 yfsltsteqs vknlyqhsnl gipgvwafhi gstspldnvr patiggdlsk arpsaplgqs
      301 fshavaledd ytqdplddyd eneeeieyps sepaeasngh ssvdvslrgr isapdsdlas
      361 pvprsasqgg petesspldp htkerrpqge tdasdlkgrv esseqpetrv pappeteges
      421 pappgeappp speggagpad qdalpahpgg eaalpnypgp dhaphlghrr qvvgveddis
      481 sntevftyna anketcehnh ercsrhafct dyatgfcchc qsrfygngkh clpegaphrv
      541 ngkvsghllv ghtpvhftdv dlhayvvgnd graytaishi pqpaaqallp ltpigglfgw
      601 lfalekpgwe ngfsltgatf ihdvevtfyp geervritqt aegldpenyl siktniqgqv
      661 pyipanfsth mapykelyhy sdsavtstst rtyslmsgai nqtrsyrihq nityqvcrha
      721 prhwafpitq qlnvdrvfal ysdeekvlrf avtnqigpve ggseptpvsp cydgshtcat
      781 tarcqpatgv aytcecasgy qgdgrscvdv necatgfhrc gpnsvcvnll gsyrcecrsg
      841 yefaddrhtc ilitpppdpc edgrhncapa sqarcihhgd gsfscaclpg yagdghrctd
      901 vdecsenrch psatcsntpg sfsclcqpgy ygdgfqctpe ptqrprtvce rwresllehy
      961 ggtprddqyv pqcdslghft plqchgksdf cwcvdqdgre vqgtrsqpgi tpaciptvap
     1021 pttrptprpd mtpppvgtfl lyaqgqqigh lplngtrlqk dvaktllslh gsivvgidyd
     1081 crermvywtd vagrtisras lepgaepetv insglispeg laidhfrrtm ywtdsgldki
     1141 erarldgser ralfhtdlvn praiavdpiq gnlywtdwnr eapkiemssl dgenrrilvn
     1201 kdiglpnglt fdpfskllcw adagtkklec ilpdgtgrrv iqnnlnypfn ivsyadhfyh
     1261 tdwrrdgvia vnrdtgqftd eylpeqrshl ygitavypyc pgrk
//
LOCUS       XP_061013353             245 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA transcription, translation and transport factor protein [Dama
            dama].
ACCESSION   XP_061013353
VERSION     XP_061013353.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157370.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..245
                     /product="RNA transcription, translation and transport
                     factor protein"
                     /calculated_mol_wt=28048
     Region          8..244
                     /region_name="RLL"
                     /note="RNA transcription, translation and transport factor
                     protein; pfam10036"
                     /db_xref="CDD:401864"
     CDS             1..245
                     /gene="RTRAF"
                     /coded_by="XM_061157370.1:107..844"
                     /db_xref="GeneID:133066366"
ORIGIN      
        1 mfrrkltald yhnpagfnck detefrnfiv wledqkirhy kiedrgnlrn ihssdwpkff
       61 ekylrdvncp fkiqdrqeai dwllglavrl eygdnaekyn kdlvpdntkn adnaaknaep
      121 linldvnnpd fkagvmalan llqiqrhddy lvmlkairil vqerltqdav akanqtkegl
      181 pvaldkhilg fdtgdavlne aaqilrllhi eelrelqtki neaivavqai iadpktdhrl
      241 gkvgr
//
LOCUS       XP_061013354              71 aa            linear   MAM 02-DEC-2023
DEFINITION  guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2
            [Dama dama].
ACCESSION   XP_061013354
VERSION     XP_061013354.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157371.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..71
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..71
                     /product="guanine nucleotide-binding protein
                     G(I)/G(S)/G(O) subunit gamma-2"
                     /calculated_mol_wt=7719
     Region          9..71
                     /region_name="GGL"
                     /note="G protein gamma subunit-like motifs; smart00224"
                     /db_xref="CDD:128520"
     Site            order(9,12,16,19,23,28,30,33..34,37..38,41,50..51,61)
                     /site_type="other"
                     /note="beta subunit binding site [polypeptide binding]"
                     /db_xref="CDD:238024"
     CDS             1..71
                     /gene="GNG2"
                     /coded_by="XM_061157371.1:246..461"
                     /db_xref="GeneID:133066367"
ORIGIN      
        1 masnntasia qarklveqlk meanidrikv skaaadlmay ceahakedpl ltpvpasenp
       61 frekkffcai l
//
LOCUS       XP_061013355              71 aa            linear   MAM 02-DEC-2023
DEFINITION  guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2
            [Dama dama].
ACCESSION   XP_061013355
VERSION     XP_061013355.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157372.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..71
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..71
                     /product="guanine nucleotide-binding protein
                     G(I)/G(S)/G(O) subunit gamma-2"
                     /calculated_mol_wt=7719
     Region          9..71
                     /region_name="GGL"
                     /note="G protein gamma subunit-like motifs; smart00224"
                     /db_xref="CDD:128520"
     Site            order(9,12,16,19,23,28,30,33..34,37..38,41,50..51,61)
                     /site_type="other"
                     /note="beta subunit binding site [polypeptide binding]"
                     /db_xref="CDD:238024"
     CDS             1..71
                     /gene="GNG2"
                     /coded_by="XM_061157372.1:152..367"
                     /db_xref="GeneID:133066367"
ORIGIN      
        1 masnntasia qarklveqlk meanidrikv skaaadlmay ceahakedpl ltpvpasenp
       61 frekkffcai l
//
LOCUS       XP_061013356             622 aa            linear   MAM 02-DEC-2023
DEFINITION  FERM domain-containing protein 6 isoform X1 [Dama dama].
ACCESSION   XP_061013356
VERSION     XP_061013356.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157373.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..622
                     /product="FERM domain-containing protein 6 isoform X1"
                     /calculated_mol_wt=71705
     Region          15..120
                     /region_name="FERM_F1_FRMD6"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain, F1 sub-domain, found in FERM domain-containing
                     protein 6 (FRMD6); cd17198"
                     /db_xref="CDD:340718"
     Region          118..234
                     /region_name="FERM_M"
                     /note="FERM central domain; pfam00373"
                     /db_xref="CDD:459788"
     Region          227..335
                     /region_name="FERM_C_FRMD1_FRMD6"
                     /note="FERM domain C-lobe of FERM domain containing 1 and
                     6 proteins; cd13185"
                     /db_xref="CDD:270006"
     Site            order(241,258,260,270)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270006"
     Site            order(274,279..282,314,318,321..322)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270006"
     Site            314..325
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:270006"
     CDS             1..622
                     /gene="FRMD6"
                     /coded_by="XM_061157373.1:289..2157"
                     /db_xref="GeneID:133066369"
ORIGIN      
        1 mnklnfhnnr vmqdrrsvci flpndeslni iinvkilchq llvqvcdllr lkdchlfgls
       61 viqnnehvym elsqklykyc pkewkkeask vrqyevtwgi dqfgppmiih frvqyyveng
      121 rlisdraary yyywhlrkqv lhsqcvlree ayfllaafal qadlgnfkrn khygkyfepe
      181 ayfpswvvsk rgkdyilkhi pnmhkdqfal taseahlkyi keavrlddva vhyyrlykdk
      241 reieasltlg ltmrgiqifq nldeekqlly dfpwtnvgkl vfvgkkfeil pdglpsarkl
      301 iyytgcpmrs rhllqllsns hrlymnlqpv lrhirkleen eekkqyresy isdnldldmd
      361 qlekrsrasg ssagsmkhkr lsrhstashs sshtsgiead tkardagped aypgsaihrk
      421 lktcssmtsh gsshtsgves ggkdrleeds qddeiemlvd dprdlepmne eslevspdmc
      481 iyitedmlls rklnghsgli vkeigsstss ssetvvklrg qstdslpqti crkpktstdr
      541 hslslddirl yqkdflriag lcqdtaqsyt fgcgheldee glycssclaq qcvniqdafp
      601 vkrtskyfsl dlthdevpef vv
//
LOCUS       XP_061013357             622 aa            linear   MAM 02-DEC-2023
DEFINITION  FERM domain-containing protein 6 isoform X1 [Dama dama].
ACCESSION   XP_061013357
VERSION     XP_061013357.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157374.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..622
                     /product="FERM domain-containing protein 6 isoform X1"
                     /calculated_mol_wt=71705
     Region          15..120
                     /region_name="FERM_F1_FRMD6"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain, F1 sub-domain, found in FERM domain-containing
                     protein 6 (FRMD6); cd17198"
                     /db_xref="CDD:340718"
     Region          118..234
                     /region_name="FERM_M"
                     /note="FERM central domain; pfam00373"
                     /db_xref="CDD:459788"
     Region          227..335
                     /region_name="FERM_C_FRMD1_FRMD6"
                     /note="FERM domain C-lobe of FERM domain containing 1 and
                     6 proteins; cd13185"
                     /db_xref="CDD:270006"
     Site            order(241,258,260,270)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270006"
     Site            order(274,279..282,314,318,321..322)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270006"
     Site            314..325
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:270006"
     CDS             1..622
                     /gene="FRMD6"
                     /coded_by="XM_061157374.1:1332..3200"
                     /db_xref="GeneID:133066369"
ORIGIN      
        1 mnklnfhnnr vmqdrrsvci flpndeslni iinvkilchq llvqvcdllr lkdchlfgls
       61 viqnnehvym elsqklykyc pkewkkeask vrqyevtwgi dqfgppmiih frvqyyveng
      121 rlisdraary yyywhlrkqv lhsqcvlree ayfllaafal qadlgnfkrn khygkyfepe
      181 ayfpswvvsk rgkdyilkhi pnmhkdqfal taseahlkyi keavrlddva vhyyrlykdk
      241 reieasltlg ltmrgiqifq nldeekqlly dfpwtnvgkl vfvgkkfeil pdglpsarkl
      301 iyytgcpmrs rhllqllsns hrlymnlqpv lrhirkleen eekkqyresy isdnldldmd
      361 qlekrsrasg ssagsmkhkr lsrhstashs sshtsgiead tkardagped aypgsaihrk
      421 lktcssmtsh gsshtsgves ggkdrleeds qddeiemlvd dprdlepmne eslevspdmc
      481 iyitedmlls rklnghsgli vkeigsstss ssetvvklrg qstdslpqti crkpktstdr
      541 hslslddirl yqkdflriag lcqdtaqsyt fgcgheldee glycssclaq qcvniqdafp
      601 vkrtskyfsl dlthdevpef vv
//
LOCUS       XP_061013358             622 aa            linear   MAM 02-DEC-2023
DEFINITION  FERM domain-containing protein 6 isoform X1 [Dama dama].
ACCESSION   XP_061013358
VERSION     XP_061013358.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157375.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..622
                     /product="FERM domain-containing protein 6 isoform X1"
                     /calculated_mol_wt=71705
     Region          15..120
                     /region_name="FERM_F1_FRMD6"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain, F1 sub-domain, found in FERM domain-containing
                     protein 6 (FRMD6); cd17198"
                     /db_xref="CDD:340718"
     Region          118..234
                     /region_name="FERM_M"
                     /note="FERM central domain; pfam00373"
                     /db_xref="CDD:459788"
     Region          227..335
                     /region_name="FERM_C_FRMD1_FRMD6"
                     /note="FERM domain C-lobe of FERM domain containing 1 and
                     6 proteins; cd13185"
                     /db_xref="CDD:270006"
     Site            order(241,258,260,270)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270006"
     Site            order(274,279..282,314,318,321..322)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270006"
     Site            314..325
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:270006"
     CDS             1..622
                     /gene="FRMD6"
                     /coded_by="XM_061157375.1:426..2294"
                     /db_xref="GeneID:133066369"
ORIGIN      
        1 mnklnfhnnr vmqdrrsvci flpndeslni iinvkilchq llvqvcdllr lkdchlfgls
       61 viqnnehvym elsqklykyc pkewkkeask vrqyevtwgi dqfgppmiih frvqyyveng
      121 rlisdraary yyywhlrkqv lhsqcvlree ayfllaafal qadlgnfkrn khygkyfepe
      181 ayfpswvvsk rgkdyilkhi pnmhkdqfal taseahlkyi keavrlddva vhyyrlykdk
      241 reieasltlg ltmrgiqifq nldeekqlly dfpwtnvgkl vfvgkkfeil pdglpsarkl
      301 iyytgcpmrs rhllqllsns hrlymnlqpv lrhirkleen eekkqyresy isdnldldmd
      361 qlekrsrasg ssagsmkhkr lsrhstashs sshtsgiead tkardagped aypgsaihrk
      421 lktcssmtsh gsshtsgves ggkdrleeds qddeiemlvd dprdlepmne eslevspdmc
      481 iyitedmlls rklnghsgli vkeigsstss ssetvvklrg qstdslpqti crkpktstdr
      541 hslslddirl yqkdflriag lcqdtaqsyt fgcgheldee glycssclaq qcvniqdafp
      601 vkrtskyfsl dlthdevpef vv
//
LOCUS       XP_061013359             622 aa            linear   MAM 02-DEC-2023
DEFINITION  FERM domain-containing protein 6 isoform X1 [Dama dama].
ACCESSION   XP_061013359
VERSION     XP_061013359.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157376.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..622
                     /product="FERM domain-containing protein 6 isoform X1"
                     /calculated_mol_wt=71705
     Region          15..120
                     /region_name="FERM_F1_FRMD6"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain, F1 sub-domain, found in FERM domain-containing
                     protein 6 (FRMD6); cd17198"
                     /db_xref="CDD:340718"
     Region          118..234
                     /region_name="FERM_M"
                     /note="FERM central domain; pfam00373"
                     /db_xref="CDD:459788"
     Region          227..335
                     /region_name="FERM_C_FRMD1_FRMD6"
                     /note="FERM domain C-lobe of FERM domain containing 1 and
                     6 proteins; cd13185"
                     /db_xref="CDD:270006"
     Site            order(241,258,260,270)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270006"
     Site            order(274,279..282,314,318,321..322)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270006"
     Site            314..325
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:270006"
     CDS             1..622
                     /gene="FRMD6"
                     /coded_by="XM_061157376.1:1392..3260"
                     /db_xref="GeneID:133066369"
ORIGIN      
        1 mnklnfhnnr vmqdrrsvci flpndeslni iinvkilchq llvqvcdllr lkdchlfgls
       61 viqnnehvym elsqklykyc pkewkkeask vrqyevtwgi dqfgppmiih frvqyyveng
      121 rlisdraary yyywhlrkqv lhsqcvlree ayfllaafal qadlgnfkrn khygkyfepe
      181 ayfpswvvsk rgkdyilkhi pnmhkdqfal taseahlkyi keavrlddva vhyyrlykdk
      241 reieasltlg ltmrgiqifq nldeekqlly dfpwtnvgkl vfvgkkfeil pdglpsarkl
      301 iyytgcpmrs rhllqllsns hrlymnlqpv lrhirkleen eekkqyresy isdnldldmd
      361 qlekrsrasg ssagsmkhkr lsrhstashs sshtsgiead tkardagped aypgsaihrk
      421 lktcssmtsh gsshtsgves ggkdrleeds qddeiemlvd dprdlepmne eslevspdmc
      481 iyitedmlls rklnghsgli vkeigsstss ssetvvklrg qstdslpqti crkpktstdr
      541 hslslddirl yqkdflriag lcqdtaqsyt fgcgheldee glycssclaq qcvniqdafp
      601 vkrtskyfsl dlthdevpef vv
//
LOCUS       XP_061013360             622 aa            linear   MAM 02-DEC-2023
DEFINITION  FERM domain-containing protein 6 isoform X1 [Dama dama].
ACCESSION   XP_061013360
VERSION     XP_061013360.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157377.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..622
                     /product="FERM domain-containing protein 6 isoform X1"
                     /calculated_mol_wt=71705
     Region          15..120
                     /region_name="FERM_F1_FRMD6"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain, F1 sub-domain, found in FERM domain-containing
                     protein 6 (FRMD6); cd17198"
                     /db_xref="CDD:340718"
     Region          118..234
                     /region_name="FERM_M"
                     /note="FERM central domain; pfam00373"
                     /db_xref="CDD:459788"
     Region          227..335
                     /region_name="FERM_C_FRMD1_FRMD6"
                     /note="FERM domain C-lobe of FERM domain containing 1 and
                     6 proteins; cd13185"
                     /db_xref="CDD:270006"
     Site            order(241,258,260,270)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270006"
     Site            order(274,279..282,314,318,321..322)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270006"
     Site            314..325
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:270006"
     CDS             1..622
                     /gene="FRMD6"
                     /coded_by="XM_061157377.1:290..2158"
                     /db_xref="GeneID:133066369"
ORIGIN      
        1 mnklnfhnnr vmqdrrsvci flpndeslni iinvkilchq llvqvcdllr lkdchlfgls
       61 viqnnehvym elsqklykyc pkewkkeask vrqyevtwgi dqfgppmiih frvqyyveng
      121 rlisdraary yyywhlrkqv lhsqcvlree ayfllaafal qadlgnfkrn khygkyfepe
      181 ayfpswvvsk rgkdyilkhi pnmhkdqfal taseahlkyi keavrlddva vhyyrlykdk
      241 reieasltlg ltmrgiqifq nldeekqlly dfpwtnvgkl vfvgkkfeil pdglpsarkl
      301 iyytgcpmrs rhllqllsns hrlymnlqpv lrhirkleen eekkqyresy isdnldldmd
      361 qlekrsrasg ssagsmkhkr lsrhstashs sshtsgiead tkardagped aypgsaihrk
      421 lktcssmtsh gsshtsgves ggkdrleeds qddeiemlvd dprdlepmne eslevspdmc
      481 iyitedmlls rklnghsgli vkeigsstss ssetvvklrg qstdslpqti crkpktstdr
      541 hslslddirl yqkdflriag lcqdtaqsyt fgcgheldee glycssclaq qcvniqdafp
      601 vkrtskyfsl dlthdevpef vv
//
LOCUS       XP_061013361             622 aa            linear   MAM 02-DEC-2023
DEFINITION  FERM domain-containing protein 6 isoform X1 [Dama dama].
ACCESSION   XP_061013361
VERSION     XP_061013361.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157378.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..622
                     /product="FERM domain-containing protein 6 isoform X1"
                     /calculated_mol_wt=71705
     Region          15..120
                     /region_name="FERM_F1_FRMD6"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain, F1 sub-domain, found in FERM domain-containing
                     protein 6 (FRMD6); cd17198"
                     /db_xref="CDD:340718"
     Region          118..234
                     /region_name="FERM_M"
                     /note="FERM central domain; pfam00373"
                     /db_xref="CDD:459788"
     Region          227..335
                     /region_name="FERM_C_FRMD1_FRMD6"
                     /note="FERM domain C-lobe of FERM domain containing 1 and
                     6 proteins; cd13185"
                     /db_xref="CDD:270006"
     Site            order(241,258,260,270)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270006"
     Site            order(274,279..282,314,318,321..322)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270006"
     Site            314..325
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:270006"
     CDS             1..622
                     /gene="FRMD6"
                     /coded_by="XM_061157378.1:168..2036"
                     /db_xref="GeneID:133066369"
ORIGIN      
        1 mnklnfhnnr vmqdrrsvci flpndeslni iinvkilchq llvqvcdllr lkdchlfgls
       61 viqnnehvym elsqklykyc pkewkkeask vrqyevtwgi dqfgppmiih frvqyyveng
      121 rlisdraary yyywhlrkqv lhsqcvlree ayfllaafal qadlgnfkrn khygkyfepe
      181 ayfpswvvsk rgkdyilkhi pnmhkdqfal taseahlkyi keavrlddva vhyyrlykdk
      241 reieasltlg ltmrgiqifq nldeekqlly dfpwtnvgkl vfvgkkfeil pdglpsarkl
      301 iyytgcpmrs rhllqllsns hrlymnlqpv lrhirkleen eekkqyresy isdnldldmd
      361 qlekrsrasg ssagsmkhkr lsrhstashs sshtsgiead tkardagped aypgsaihrk
      421 lktcssmtsh gsshtsgves ggkdrleeds qddeiemlvd dprdlepmne eslevspdmc
      481 iyitedmlls rklnghsgli vkeigsstss ssetvvklrg qstdslpqti crkpktstdr
      541 hslslddirl yqkdflriag lcqdtaqsyt fgcgheldee glycssclaq qcvniqdafp
      601 vkrtskyfsl dlthdevpef vv
//
LOCUS       XP_061013362             614 aa            linear   MAM 02-DEC-2023
DEFINITION  FERM domain-containing protein 6 isoform X2 [Dama dama].
ACCESSION   XP_061013362
VERSION     XP_061013362.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157379.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..614
                     /product="FERM domain-containing protein 6 isoform X2"
                     /calculated_mol_wt=70643
     Region          15..112
                     /region_name="FERM_F1_FRMD6"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain, F1 sub-domain, found in FERM domain-containing
                     protein 6 (FRMD6); cd17198"
                     /db_xref="CDD:340718"
     Region          20..226
                     /region_name="B41"
                     /note="Band 4.1 homologues; smart00295"
                     /db_xref="CDD:214604"
     Region          219..327
                     /region_name="FERM_C_FRMD1_FRMD6"
                     /note="FERM domain C-lobe of FERM domain containing 1 and
                     6 proteins; cd13185"
                     /db_xref="CDD:270006"
     Site            order(233,250,252,262)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270006"
     Site            order(266,271..274,306,310,313..314)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270006"
     Site            306..317
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:270006"
     CDS             1..614
                     /gene="FRMD6"
                     /coded_by="XM_061157379.1:289..2133"
                     /db_xref="GeneID:133066369"
ORIGIN      
        1 mnklnfhnnr vmqdrrsvci flpndeslni iinvkilchq llvqvcdllr lkdchlfgls
       61 viqnnehvym elsqklykyc pkewkkeask gidqfgppmi ihfrvqyyve ngrlisdraa
      121 ryyyywhlrk qvlhsqcvlr eeayfllaaf alqadlgnfk rnkhygkyfe peayfpswvv
      181 skrgkdyilk hipnmhkdqf altaseahlk yikeavrldd vavhyyrlyk dkreieaslt
      241 lgltmrgiqi fqnldeekql lydfpwtnvg klvfvgkkfe ilpdglpsar kliyytgcpm
      301 rsrhllqlls nshrlymnlq pvlrhirkle eneekkqyre syisdnldld mdqlekrsra
      361 sgssagsmkh krlsrhstas hssshtsgie adtkardagp edaypgsaih rklktcssmt
      421 shgsshtsgv esggkdrlee dsqddeieml vddprdlepm neeslevspd mciyitedml
      481 lsrklnghsg livkeigsst ssssetvvkl rgqstdslpq ticrkpktst drhslslddi
      541 rlyqkdflri aglcqdtaqs ytfgcgheld eeglycsscl aqqcvniqda fpvkrtskyf
      601 sldlthdevp efvv
//
LOCUS       XP_061013363             278 aa            linear   MAM 02-DEC-2023
DEFINITION  thioredoxin-related transmembrane protein 1 [Dama dama].
ACCESSION   XP_061013363
VERSION     XP_061013363.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157380.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..278
                     /product="thioredoxin-related transmembrane protein 1"
                     /calculated_mol_wt=31480
     Region          29..129
                     /region_name="PDI_a_TMX"
                     /note="PDIa family, TMX subfamily; composed of proteins
                     similar to the TRX-related human transmembrane protein,
                     TMX. TMX is a type I integral membrane protein; the
                     N-terminal redox active TRX domain is present in the
                     endoplasmic reticulum (ER) lumen while the...; cd02994"
                     /db_xref="CDD:239292"
     Site            order(56,59)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239292"
     CDS             1..278
                     /gene="TMX1"
                     /coded_by="XM_061157380.1:83..919"
                     /db_xref="GeneID:133066370"
ORIGIN      
        1 mapsgslrip vavlllllwg apwahgrrsd vriitdenwr ellegewmie fyapwcpacq
       61 nlqpewesfa ewgedlevnv akvdvteqpg lsgrfiital ptiyhckdge frryqgprtk
      121 kdfinfvsdk ewksiepvss wfgpgsilms smsalfrlsm wirtchnyfi edlglpiwgs
      181 ytvfalatll sglllglfmi fvadflcpsk rrrpqacpsr kllpessqpl kkveeeqead
      241 vedvseeese skegtnkdfa qnavrqrsvg pslatdks
//
LOCUS       XP_061013364             710 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase TRIM9 isoform X1 [Dama dama].
ACCESSION   XP_061013364
VERSION     XP_061013364.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157381.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..710
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..710
                     /product="E3 ubiquitin-protein ligase TRIM9 isoform X1"
                     /calculated_mol_wt=79227
     Region          5..49
                     /region_name="RING-HC_TRIM9"
                     /note="RING finger, HC subclass, found in tripartite
                     motif-containing protein 9 (TRIM9) and similar proteins;
                     cd16755"
                     /db_xref="CDD:438413"
     Region          166..212
                     /region_name="Bbox1_TRIM9_C-I"
                     /note="B-box-type 1 zinc finger found in tripartite
                     motif-containing protein 9 (TRIM9) and similar proteins;
                     cd19843"
                     /db_xref="CDD:380901"
     Region          223..271
                     /region_name="Bbox2_TRIM9_C-I"
                     /note="B-box-type 2 zinc finger found in tripartite
                     motif-containing protein 9 (TRIM9) and similar proteins;
                     cd19826"
                     /db_xref="CDD:380884"
     Region          273..399
                     /region_name="BBC"
                     /note="B-Box C-terminal domain; smart00502"
                     /db_xref="CDD:128778"
     Region          453..532
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(521..522,524..525)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          529..700
                     /region_name="SPRY_PRY_TRIM67_9"
                     /note="PRY/SPRY domain in tripartite motif-containing
                     proteins, TRIM9 and TRIM67; cd12889"
                     /db_xref="CDD:293947"
     CDS             1..710
                     /gene="TRIM9"
                     /coded_by="XM_061157381.1:178..2310"
                     /db_xref="GeneID:133066371"
ORIGIN      
        1 meemeeelkc pvcgsfyrep iilpcshnic qacarnilvq tpesespqsr rasgsgvsdy
       61 dyldldkmsl yseadsgygs yggfasaptt pcqkspngvr vfppampppa thlspalasv
      121 prnscitcpq chrslilddr glrgfpknrv legvidryqq skaaalkcql cekapkeatv
      181 mceqcdvfyc dpcrlrchpp rgplakhrlv ppaqgrvsrr lsprkvstct dhelenhsmy
      241 cvqckmpvcy qcleegkhss hevkalgamw klhksqlsqa lnglsdrake akeflvqlrn
      301 mvqqiqensv efeaclvaqc dalidalnrr kaqllarvnk ehehklkvvr dqishctvkl
      361 rqttglmeyc levikendps gflqisdali rrvhltedqw gkgtltprmt tdfdlsldns
      421 pllqsihqld fvqmkasppv patpilqled ccthnnsatl swkqpplstv paegyileld
      481 dgnggqfrev yvgketmctv dglhfnstyn arikafnktg vsqysktlvl qtsevawfaf
      541 dpgsahsdii fsndnltvtc ssyddrvvlg ktgfskgvhy weltvdrydn hpdpafgvar
      601 idvmkdvmlg kddkawamyv dnnrswfmhn nshtnrtegg itkgatigvl ldfnrktltf
      661 findeqqgpi afenveglff pavslnrnvq vtlhtglqvp dfyssrasia
//
LOCUS       XP_061013365             706 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase TRIM9 isoform X2 [Dama dama].
ACCESSION   XP_061013365
VERSION     XP_061013365.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157382.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..706
                     /product="E3 ubiquitin-protein ligase TRIM9 isoform X2"
                     /calculated_mol_wt=78874
     Region          5..49
                     /region_name="RING-HC_TRIM9"
                     /note="RING finger, HC subclass, found in tripartite
                     motif-containing protein 9 (TRIM9) and similar proteins;
                     cd16755"
                     /db_xref="CDD:438413"
     Region          166..212
                     /region_name="Bbox1_TRIM9_C-I"
                     /note="B-box-type 1 zinc finger found in tripartite
                     motif-containing protein 9 (TRIM9) and similar proteins;
                     cd19843"
                     /db_xref="CDD:380901"
     Region          223..271
                     /region_name="Bbox2_TRIM9_C-I"
                     /note="B-box-type 2 zinc finger found in tripartite
                     motif-containing protein 9 (TRIM9) and similar proteins;
                     cd19826"
                     /db_xref="CDD:380884"
     Region          273..399
                     /region_name="BBC"
                     /note="B-Box C-terminal domain; smart00502"
                     /db_xref="CDD:128778"
     Region          449..528
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(517..518,520..521)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          525..696
                     /region_name="SPRY_PRY_TRIM67_9"
                     /note="PRY/SPRY domain in tripartite motif-containing
                     proteins, TRIM9 and TRIM67; cd12889"
                     /db_xref="CDD:293947"
     CDS             1..706
                     /gene="TRIM9"
                     /coded_by="XM_061157382.1:180..2300"
                     /db_xref="GeneID:133066371"
ORIGIN      
        1 meemeeelkc pvcgsfyrep iilpcshnic qacarnilvq tpesespqsr rasgsgvsdy
       61 dyldldkmsl yseadsgygs yggfasaptt pcqkspngvr vfppampppa thlspalasv
      121 prnscitcpq chrslilddr glrgfpknrv legvidryqq skaaalkcql cekapkeatv
      181 mceqcdvfyc dpcrlrchpp rgplakhrlv ppaqgrvsrr lsprkvstct dhelenhsmy
      241 cvqckmpvcy qcleegkhss hevkalgamw klhksqlsqa lnglsdrake akeflvqlrn
      301 mvqqiqensv efeaclvaqc dalidalnrr kaqllarvnk ehehklkvvr dqishctvkl
      361 rqttglmeyc levikendps gflqisdali rrvhltedqw gkgtltprmt tdfdlsldns
      421 pllqsihqld fvqmkvpatp ilqledccth nnsatlswkq pplstvpaeg yilelddgng
      481 gqfrevyvgk etmctvdglh fnstynarik afnktgvsqy sktlvlqtse vawfafdpgs
      541 ahsdiifsnd nltvtcssyd drvvlgktgf skgvhywelt vdrydnhpdp afgvaridvm
      601 kdvmlgkddk awamyvdnnr swfmhnnsht nrteggitkg atigvlldfn rktltffind
      661 eqqgpiafen veglffpavs lnrnvqvtlh tglqvpdfys srasia
//
LOCUS       XP_061013366             692 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase TRIM9 isoform X3 [Dama dama].
ACCESSION   XP_061013366
VERSION     XP_061013366.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157383.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..692
                     /product="E3 ubiquitin-protein ligase TRIM9 isoform X3"
                     /calculated_mol_wt=76934
     Region          5..49
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Region          166..212
                     /region_name="Bbox1_TRIM9_C-I"
                     /note="B-box-type 1 zinc finger found in tripartite
                     motif-containing protein 9 (TRIM9) and similar proteins;
                     cd19843"
                     /db_xref="CDD:380901"
     Region          223..271
                     /region_name="Bbox2_TRIM9_C-I"
                     /note="B-box-type 2 zinc finger found in tripartite
                     motif-containing protein 9 (TRIM9) and similar proteins;
                     cd19826"
                     /db_xref="CDD:380884"
     Region          273..399
                     /region_name="BBC"
                     /note="B-Box C-terminal domain; smart00502"
                     /db_xref="CDD:128778"
     Region          453..532
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(521..522,524..525)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          529..682
                     /region_name="SPRY_PRY_TRIM67_9"
                     /note="PRY/SPRY domain in tripartite motif-containing
                     proteins, TRIM9 and TRIM67; cd12889"
                     /db_xref="CDD:293947"
     CDS             1..692
                     /gene="TRIM9"
                     /coded_by="XM_061157383.1:179..2257"
                     /db_xref="GeneID:133066371"
ORIGIN      
        1 meemeeelkc pvcgsfyrep iilpcshnic qacarnilvq tpesespqsr rasgsgvsdy
       61 dyldldkmsl yseadsgygs yggfasaptt pcqkspngvr vfppampppa thlspalasv
      121 prnscitcpq chrslilddr glrgfpknrv legvidryqq skaaalkcql cekapkeatv
      181 mceqcdvfyc dpcrlrchpp rgplakhrlv ppaqgrvsrr lsprkvstct dhelenhsmy
      241 cvqckmpvcy qcleegkhss hevkalgamw klhksqlsqa lnglsdrake akeflvqlrn
      301 mvqqiqensv efeaclvaqc dalidalnrr kaqllarvnk ehehklkvvr dqishctvkl
      361 rqttglmeyc levikendps gflqisdali rrvhltedqw gkgtltprmt tdfdlsldns
      421 pllqsihqld fvqmkasppv patpilqled ccthnnsatl swkqpplstv paegyileld
      481 dgnggqfrev yvgketmctv dglhfnstyn arikafnktg vsqysktlvl qtsevawfaf
      541 dpgsahsdii fsndnltvtc ssyddrvvlg ktgfskgvhy weltvdrydn hpdpafgvar
      601 idvmkdvmlg kddkawaite ggitkgatig vlldfnrktl tffindeqqg piafenvegl
      661 ffpavslnrn vqvtlhtglq vpdfyssras ia
//
LOCUS       XP_061013367             678 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase TRIM9 isoform X4 [Dama dama].
ACCESSION   XP_061013367
VERSION     XP_061013367.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157384.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..678
                     /product="E3 ubiquitin-protein ligase TRIM9 isoform X4"
                     /calculated_mol_wt=75600
     Region          5..49
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Region          166..212
                     /region_name="Bbox1_TRIM9_C-I"
                     /note="B-box-type 1 zinc finger found in tripartite
                     motif-containing protein 9 (TRIM9) and similar proteins;
                     cd19843"
                     /db_xref="CDD:380901"
     Region          223..271
                     /region_name="Bbox2_TRIM9_C-I"
                     /note="B-box-type 2 zinc finger found in tripartite
                     motif-containing protein 9 (TRIM9) and similar proteins;
                     cd19826"
                     /db_xref="CDD:380884"
     Region          <274..367
                     /region_name="BBC"
                     /note="B-Box C-terminal domain; smart00502"
                     /db_xref="CDD:128778"
     Region          421..500
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(489..490,492..493)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          497..668
                     /region_name="SPRY_PRY_TRIM67_9"
                     /note="PRY/SPRY domain in tripartite motif-containing
                     proteins, TRIM9 and TRIM67; cd12889"
                     /db_xref="CDD:293947"
     CDS             1..678
                     /gene="TRIM9"
                     /coded_by="XM_061157384.1:178..2214"
                     /db_xref="GeneID:133066371"
ORIGIN      
        1 meemeeelkc pvcgsfyrep iilpcshnic qacarnilvq tpesespqsr rasgsgvsdy
       61 dyldldkmsl yseadsgygs yggfasaptt pcqkspngvr vfppampppa thlspalasv
      121 prnscitcpq chrslilddr glrgfpknrv legvidryqq skaaalkcql cekapkeatv
      181 mceqcdvfyc dpcrlrchpp rgplakhrlv ppaqgrvsrr lsprkvstct dhelenhsmy
      241 cvqckmpvcy qcleegkhss hevkalgamw klhkensvef eaclvaqcda lidalnrrka
      301 qllarvnkeh ehklkvvrdq ishctvklrq ttglmeycle vikendpsgf lqisdalirr
      361 vhltedqwgk gtltprmttd fdlsldnspl lqsihqldfv qmkasppvpa tpilqledcc
      421 thnnsatlsw kqpplstvpa egyilelddg nggqfrevyv gketmctvdg lhfnstynar
      481 ikafnktgvs qysktlvlqt sevawfafdp gsahsdiifs ndnltvtcss yddrvvlgkt
      541 gfskgvhywe ltvdrydnhp dpafgvarid vmkdvmlgkd dkawamyvdn nrswfmhnns
      601 htnrteggit kgatigvlld fnrktltffi ndeqqgpiaf enveglffpa vslnrnvqvt
      661 lhtglqvpdf yssrasia
//
LOCUS       XP_061013368             851 aa            linear   MAM 02-DEC-2023
DEFINITION  glycogen phosphorylase, liver form [Dama dama].
ACCESSION   XP_061013368
VERSION     XP_061013368.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157385.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..851
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..851
                     /product="glycogen phosphorylase, liver form"
                     /calculated_mol_wt=97114
     Region          29..827
                     /region_name="GT35_Glycogen_Phosphorylase"
                     /note="glycogen phosphorylase and similar proteins;
                     cd04300"
                     /db_xref="CDD:340853"
     Site            order(29,31,33..34,36..38,61..63,194,283,286)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:340853"
     Site            order(89,91,135..137,281,284,286,293,340,342,378..379,383,
                     485,492,569..570,572..575,609,614,616,650..651,673,
                     675..678,681)
                     /site_type="active"
                     /note="active site pocket [active]"
                     /db_xref="CDD:340853"
     CDS             1..851
                     /gene="PYGL"
                     /coded_by="XM_061157385.1:78..2633"
                     /db_xref="GeneID:133066373"
ORIGIN      
        1 makpltdqek rrqisirgiv gvenvaelkk gfnrhlhftl vkdrnvatpr dyffalahtv
       61 rdhlvgrwir tqqyyyekcp krvyylslef ymgrtlqntm inlglqnacd eaiyqlgldm
      121 eeleeieeda glgngglgrl aacfldsmat lglaaygygi ryeygifnqk irdgwqieea
      181 ddwlrhgnpw ekarpefmlp vhfygrvent eagtkwidtq vvlalpydtp vpgylnntvn
      241 tmrlwsarap ndfnlrdfnv gdyiqavldr nlaenisrvl ypndnffegk elrlkqeyfv
      301 vaatlqdvir rfkaskfdss ksaatafdaf pdqvaiqlnd thpalaipel mrifvdiekl
      361 pwskaweitq ktfaytnhtv lpealerwpv alvekllprh lqiiyeinqk hldkiaalfp
      421 kdvdrlrrms lieeeggkri nmahlcivgs havngvakih sdivktqvfk dfselepdkf
      481 qnktngitpr rwlllcnpgl aeliaekige dyvkdlsqlt klnsflgddi flreisnvkq
      541 enklkfsqfl ekeykvkinp ssmfdvqvkr iheykrqlln clhvvtmynr ikkdpkklfv
      601 prtviiggka apgyhmakli iklitsvaev vnndpvvgsk lkliflenyk vslaekvipa
      661 tdlseqista gteasgtgnm kfmlngalti gtmdganvem aeeageenlf ifgmrvedva
      721 aldkkgyeak eyyealpelk laidqidkgf fspkqpdlfk dlvnmlfyhd rfkvfadyea
      781 yvkcqekvsq lymnpkawni mvlkniaasg kfssdrtike yardiwnmep sdikislsse
      841 psggankang e
//
LOCUS       XP_061013369             348 aa            linear   MAM 02-DEC-2023
DEFINITION  protein ABHD12B [Dama dama].
ACCESSION   XP_061013369
VERSION     XP_061013369.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157386.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..348
                     /product="protein ABHD12B"
                     /calculated_mol_wt=38802
     Region          116..329
                     /region_name="FrsA"
                     /note="Fermentation-respiration switch esterase FrsA,
                     DUF1100 family [Signal transduction mechanisms]; COG1073"
                     /db_xref="CDD:440691"
     CDS             1..348
                     /gene="ABHD12B"
                     /coded_by="XM_061157386.1:65..1111"
                     /db_xref="GeneID:133066374"
ORIGIN      
        1 mepdgrdsva awwhmvvrnl rsfphscstl grkiatlcds ftskslkeqi cpplmhmlif
       61 vnffkapflv dlkkpelkip htvnfyikve pgvilgiwht vpscrgedak gkgrswyeaa
      121 lcdgnpiivy lhgsaqhraa shrlklvkvl snggfhvlsv dyrgfgdstg tptedgltad
      181 avcvyewtka rsgttpvclw ghslgtgvat naakvleekg fpadaiilea pftniwvasi
      241 nypllkiyrk lpgflksvmd slrkdklvfp ndenvkflss plliihgedd ktvplefgkk
      301 lyeiahnayr nkervkmvif ppgfrhnslc kssallhtvr dflsqqwa
//
LOCUS       XP_061013370            2183 aa            linear   MAM 02-DEC-2023
DEFINITION  ninein isoform X1 [Dama dama].
ACCESSION   XP_061013370
VERSION     XP_061013370.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157387.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2183
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2183
                     /product="ninein isoform X1"
                     /calculated_mol_wt=254207
     Region          403..>1056
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          783..1692
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <1589..1914
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..2183
                     /gene="NIN"
                     /coded_by="XM_061157387.1:177..6728"
                     /db_xref="GeneID:133066375"
ORIGIN      
        1 mdeaeqdqhe arlkelfdsf dttgtgslgq eeltdlchml sleevapvlq etllqdnllg
       61 rvhfdqfkea lililsrtls neehfqepas vgvscqqvar vsgpllnahk ltqsllikdc
      121 tleaqpkyvr ggkrygrrsl pefqesveef aevtviepld eeaqpshipa sersehwktq
      181 rseeyeaegq lrfwnpddlk asqsgslapq dwieeklqev cedlgitrdg hlnrkklvsi
      241 ceqyglqnvd gemleevfhn ldpdgmmsve dffyglfkng kpltpsastp yrqlkrhism
      301 qsfdesgrrt ttpsammstt gfrvfscldd gmgyasveri ldtwqeegie nsqeilkald
      361 fsldgnvnlt eltlalenel lvtknsihqa alasfkaeir hllervdqml rekeklrsdl
      421 dkaeklkslm asevddhhaa ierrneynlr kldeeykeri aalknefrke reqilqqvgk
      481 qrleleqeie kakteenyir drlalslken srlenellen aeklaeyesl tnklqrnlen
      541 vlaekfgdld pssaefflqe erltqmrney eqqcrllqdq vdelqselqe yrtqgkvfrl
      601 plknslseel dinsgciepd qglgseecnp lnmsieaelv ieqmkeqhhr dlchlrlele
      661 dkvnyyekql detkvafeke qenmklkcen evhileeqis dlknkiaelq gqtevlkeaq
      721 hmaicrheee kkqlqmmwae ekthvqeelr lehemalrar leqveegfnr ereklvqnga
      781 wteekvrglt qkleqahqeq lkslvekhil ekeelqkell ekhqrelheg rekmetecnr
      841 rtsqieaqfq adcqkvtery ehalrsleah yrqqlkelld qqceersqwe fekdeltqec
      901 aeaqeqlket lqrekatslv ltqeremlek tykehlnsmv vereqllqdl edlrnvserq
      961 qsllsnqile lkssherelk dreqvpchag tseqlvsqrl erlqrehdqe tqemmskllv
     1021 mesvhratce kadreraems teisrlqnki kemeqvvppp srlqnscqvi ggeeaeenga
     1081 msllqqgeql leengdvlls lqraheravk envkmateis rlqqrlqkle pesimsscld
     1141 epatglfgns veqtepflqp nrikqaeggt tqrilndlqg ddvrdlestg assgqrqvrv
     1201 eeseasiesf selenseetr tetwdlknqv gqlreqlmil radcdrasek kqdllfdvsv
     1261 lkkklkmler iseaspkykl lyedasrene clqeelrmme trydealesn keltsemfrl
     1321 qdelkkveem tdtflsleks yneikrenee lhvlvlrlqg kieklreraa lqcdcfslwe
     1381 ahldnlevgp dekvfernqt ldehvpnvms vhhiieehly qenqyleqen tqllekvkah
     1441 eiawlhgtlq thrdkpgaqn rvileental lglqdkhcqh qatiaelere kkklqeltrk
     1501 lrervtalvk qkdvpsqgek eeelkammhd lqitcsemqq kvellryese klqeensilr
     1561 neittlneed sisnlklgkl sgsqeemwqk ietvqqekaa vqkmvenlkk qiselktknq
     1621 qldlenmkls qknsqnqkel qelnqrlaem lsqnnkepgh saceeweqek snlkeelehc
     1681 klqsstlvss leaklsevki qthiveqenl llkdelekmk qlcrcpdlsd fqqkissils
     1741 hnekllkeke alseelnicv dklaksslle hriatmkqeq kswehqsesl ksqlvasqek
     1801 vqnledtlqn vnlqmsriks dlrvtqqeke alkqevmslh kqlqnasdkn rtpeigthps
     1861 gfhnqqqsls wdkldhlmne eqqllwrend rvptmvqntk selilsrekv rqlesnlpsp
     1921 khqkhlnssg tvkpteqekl slkreceqfq kersptnrka hlgdipgsvp dnhnkvsqik
     1981 slereletih leneglkkkq vkldeqlmem qhlrstmmls psphawelql lqqqacpvvp
     2041 rehflqlqhq llqaerinqc lqeelenrts etntpqgnqe ylvtvmeerm leveqklklv
     2101 krllqekvnq lkeqlckntk adaivkdlyv enaqllkale mteqrqktae kknylleeki
     2161 aslsnivrnl tpapltstpp lrs
//
LOCUS       XP_061013371            2183 aa            linear   MAM 02-DEC-2023
DEFINITION  ninein isoform X1 [Dama dama].
ACCESSION   XP_061013371
VERSION     XP_061013371.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157388.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2183
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2183
                     /product="ninein isoform X1"
                     /calculated_mol_wt=254207
     Region          403..>1056
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          783..1692
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <1589..1914
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..2183
                     /gene="NIN"
                     /coded_by="XM_061157388.1:142..6693"
                     /db_xref="GeneID:133066375"
ORIGIN      
        1 mdeaeqdqhe arlkelfdsf dttgtgslgq eeltdlchml sleevapvlq etllqdnllg
       61 rvhfdqfkea lililsrtls neehfqepas vgvscqqvar vsgpllnahk ltqsllikdc
      121 tleaqpkyvr ggkrygrrsl pefqesveef aevtviepld eeaqpshipa sersehwktq
      181 rseeyeaegq lrfwnpddlk asqsgslapq dwieeklqev cedlgitrdg hlnrkklvsi
      241 ceqyglqnvd gemleevfhn ldpdgmmsve dffyglfkng kpltpsastp yrqlkrhism
      301 qsfdesgrrt ttpsammstt gfrvfscldd gmgyasveri ldtwqeegie nsqeilkald
      361 fsldgnvnlt eltlalenel lvtknsihqa alasfkaeir hllervdqml rekeklrsdl
      421 dkaeklkslm asevddhhaa ierrneynlr kldeeykeri aalknefrke reqilqqvgk
      481 qrleleqeie kakteenyir drlalslken srlenellen aeklaeyesl tnklqrnlen
      541 vlaekfgdld pssaefflqe erltqmrney eqqcrllqdq vdelqselqe yrtqgkvfrl
      601 plknslseel dinsgciepd qglgseecnp lnmsieaelv ieqmkeqhhr dlchlrlele
      661 dkvnyyekql detkvafeke qenmklkcen evhileeqis dlknkiaelq gqtevlkeaq
      721 hmaicrheee kkqlqmmwae ekthvqeelr lehemalrar leqveegfnr ereklvqnga
      781 wteekvrglt qkleqahqeq lkslvekhil ekeelqkell ekhqrelheg rekmetecnr
      841 rtsqieaqfq adcqkvtery ehalrsleah yrqqlkelld qqceersqwe fekdeltqec
      901 aeaqeqlket lqrekatslv ltqeremlek tykehlnsmv vereqllqdl edlrnvserq
      961 qsllsnqile lkssherelk dreqvpchag tseqlvsqrl erlqrehdqe tqemmskllv
     1021 mesvhratce kadreraems teisrlqnki kemeqvvppp srlqnscqvi ggeeaeenga
     1081 msllqqgeql leengdvlls lqraheravk envkmateis rlqqrlqkle pesimsscld
     1141 epatglfgns veqtepflqp nrikqaeggt tqrilndlqg ddvrdlestg assgqrqvrv
     1201 eeseasiesf selenseetr tetwdlknqv gqlreqlmil radcdrasek kqdllfdvsv
     1261 lkkklkmler iseaspkykl lyedasrene clqeelrmme trydealesn keltsemfrl
     1321 qdelkkveem tdtflsleks yneikrenee lhvlvlrlqg kieklreraa lqcdcfslwe
     1381 ahldnlevgp dekvfernqt ldehvpnvms vhhiieehly qenqyleqen tqllekvkah
     1441 eiawlhgtlq thrdkpgaqn rvileental lglqdkhcqh qatiaelere kkklqeltrk
     1501 lrervtalvk qkdvpsqgek eeelkammhd lqitcsemqq kvellryese klqeensilr
     1561 neittlneed sisnlklgkl sgsqeemwqk ietvqqekaa vqkmvenlkk qiselktknq
     1621 qldlenmkls qknsqnqkel qelnqrlaem lsqnnkepgh saceeweqek snlkeelehc
     1681 klqsstlvss leaklsevki qthiveqenl llkdelekmk qlcrcpdlsd fqqkissils
     1741 hnekllkeke alseelnicv dklaksslle hriatmkqeq kswehqsesl ksqlvasqek
     1801 vqnledtlqn vnlqmsriks dlrvtqqeke alkqevmslh kqlqnasdkn rtpeigthps
     1861 gfhnqqqsls wdkldhlmne eqqllwrend rvptmvqntk selilsrekv rqlesnlpsp
     1921 khqkhlnssg tvkpteqekl slkreceqfq kersptnrka hlgdipgsvp dnhnkvsqik
     1981 slereletih leneglkkkq vkldeqlmem qhlrstmmls psphawelql lqqqacpvvp
     2041 rehflqlqhq llqaerinqc lqeelenrts etntpqgnqe ylvtvmeerm leveqklklv
     2101 krllqekvnq lkeqlckntk adaivkdlyv enaqllkale mteqrqktae kknylleeki
     2161 aslsnivrnl tpapltstpp lrs
//
LOCUS       XP_061013373            2167 aa            linear   MAM 02-DEC-2023
DEFINITION  ninein isoform X2 [Dama dama].
ACCESSION   XP_061013373
VERSION     XP_061013373.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157390.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2167
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2167
                     /product="ninein isoform X2"
                     /calculated_mol_wt=252555
     Region          403..>1056
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          783..1692
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          1548..>1991
                     /region_name="Mplasa_alph_rch"
                     /note="helix-rich Mycoplasma protein; TIGR04523"
                     /db_xref="CDD:275316"
     CDS             1..2167
                     /gene="NIN"
                     /coded_by="XM_061157390.1:177..6680"
                     /db_xref="GeneID:133066375"
ORIGIN      
        1 mdeaeqdqhe arlkelfdsf dttgtgslgq eeltdlchml sleevapvlq etllqdnllg
       61 rvhfdqfkea lililsrtls neehfqepas vgvscqqvar vsgpllnahk ltqsllikdc
      121 tleaqpkyvr ggkrygrrsl pefqesveef aevtviepld eeaqpshipa sersehwktq
      181 rseeyeaegq lrfwnpddlk asqsgslapq dwieeklqev cedlgitrdg hlnrkklvsi
      241 ceqyglqnvd gemleevfhn ldpdgmmsve dffyglfkng kpltpsastp yrqlkrhism
      301 qsfdesgrrt ttpsammstt gfrvfscldd gmgyasveri ldtwqeegie nsqeilkald
      361 fsldgnvnlt eltlalenel lvtknsihqa alasfkaeir hllervdqml rekeklrsdl
      421 dkaeklkslm asevddhhaa ierrneynlr kldeeykeri aalknefrke reqilqqvgk
      481 qrleleqeie kakteenyir drlalslken srlenellen aeklaeyesl tnklqrnlen
      541 vlaekfgdld pssaefflqe erltqmrney eqqcrllqdq vdelqselqe yrtqgkvfrl
      601 plknslseel dinsgciepd qglgseecnp lnmsieaelv ieqmkeqhhr dlchlrlele
      661 dkvnyyekql detkvafeke qenmklkcen evhileeqis dlknkiaelq gqtevlkeaq
      721 hmaicrheee kkqlqmmwae ekthvqeelr lehemalrar leqveegfnr ereklvqnga
      781 wteekvrglt qkleqahqeq lkslvekhil ekeelqkell ekhqrelheg rekmetecnr
      841 rtsqieaqfq adcqkvtery ehalrsleah yrqqlkelld qqceersqwe fekdeltqec
      901 aeaqeqlket lqrekatslv ltqeremlek tykehlnsmv vereqllqdl edlrnvserq
      961 qsllsnqile lkssherelk dreqvpchag tseqlvsqrl erlqrehdqe tqemmskllv
     1021 mesvhratce kadreraems teisrlqnki kemeqvvppp srlqnscqvi ggeeaeenga
     1081 msllqqgeql leengdvlls lqraheravk envkmateis rlqqrlqkle pesimsscld
     1141 epatglfgns veqtepflqp nrikqaeggt tqrilndlqg ddvrdlestg assgqrqvrv
     1201 eeseasiesf selenseetr tetwdlknqv gqlreqlmil radcdrasek kqdllfdvsv
     1261 lkkklkmler iseaspkykl lyedasrene clqeelrmme trydealesn keltsemfrl
     1321 qdelkkveem tdtflsleks yneikrenee lhvlvlrlqg kieklreraa lqcdcfslwe
     1381 ahldnlevgp dekvfernqt ldehvpnvms vhhiieehly qenqyleqen tqllekvkah
     1441 eiawlhgtlq thrdkpgaqn rvileental lglqdkhcqh qatiaelere kkklqeltrk
     1501 lrervtalvk qkdvpsqgek eeelkammhd lqitcsemqq kvellryese klqeensilr
     1561 neittlneed sisnlklgkl sgsqeemwqk ietvqqekaa vqkmvenlkk qiselktknq
     1621 qldlenmkls qknsqnqkel qelnqrlaem lsqnnkepgh saceeweqek snlkeelehc
     1681 klqsstlvss leaklsevki qthiveqenl llkdelekmk qlcrcpdlsd fqqkissils
     1741 hnekllkeke alseelnicv dklaksslle hriatmkqeq kswehqsesl ksqlvasqek
     1801 vqnledtlqn vnlqmsriks dlrvtqqeke alkqevmslh kqlqnasdkn rtpeigthps
     1861 gfhnqqqsls wdkldhlmne eqqllwrend rvptmvqntk selilsrekv rqlesnlpsp
     1921 khqkhlnssg tvkpteqekl slkreceqfq kersptnrkv sqikslerel etihlenegl
     1981 kkkqvkldeq lmemqhlrst mmlspsphaw elqllqqqac pvvprehflq lqhqllqaer
     2041 inqclqeele nrtsetntpq gnqeylvtvm eermleveqk lklvkrllqe kvnqlkeqlc
     2101 kntkadaivk dlyvenaqll kalemteqrq ktaekknyll eekiaslsni vrnltpaplt
     2161 stpplrs
//
LOCUS       XP_061013374            2153 aa            linear   MAM 02-DEC-2023
DEFINITION  ninein isoform X3 [Dama dama].
ACCESSION   XP_061013374
VERSION     XP_061013374.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157391.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2153
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2153
                     /product="ninein isoform X3"
                     /calculated_mol_wt=251107
     Region          373..>1026
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          753..1662
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <1559..1884
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..2153
                     /gene="NIN"
                     /coded_by="XM_061157391.1:176..6637"
                     /db_xref="GeneID:133066375"
ORIGIN      
        1 mdeaeqdqhe arlkelfdsf dttgtgslgq eeltdlchml sleevapvlq etllqdnllg
       61 rvhfdqfkea lililsrtls neehfqepdc tleaqpkyvr ggkrygrrsl pefqesveef
      121 aevtviepld eeaqpshipa sersehwktq rseeyeaegq lrfwnpddlk asqsgslapq
      181 dwieeklqev cedlgitrdg hlnrkklvsi ceqyglqnvd gemleevfhn ldpdgmmsve
      241 dffyglfkng kpltpsastp yrqlkrhism qsfdesgrrt ttpsammstt gfrvfscldd
      301 gmgyasveri ldtwqeegie nsqeilkald fsldgnvnlt eltlalenel lvtknsihqa
      361 alasfkaeir hllervdqml rekeklrsdl dkaeklkslm asevddhhaa ierrneynlr
      421 kldeeykeri aalknefrke reqilqqvgk qrleleqeie kakteenyir drlalslken
      481 srlenellen aeklaeyesl tnklqrnlen vlaekfgdld pssaefflqe erltqmrney
      541 eqqcrllqdq vdelqselqe yrtqgkvfrl plknslseel dinsgciepd qglgseecnp
      601 lnmsieaelv ieqmkeqhhr dlchlrlele dkvnyyekql detkvafeke qenmklkcen
      661 evhileeqis dlknkiaelq gqtevlkeaq hmaicrheee kkqlqmmwae ekthvqeelr
      721 lehemalrar leqveegfnr ereklvqnga wteekvrglt qkleqahqeq lkslvekhil
      781 ekeelqkell ekhqrelheg rekmetecnr rtsqieaqfq adcqkvtery ehalrsleah
      841 yrqqlkelld qqceersqwe fekdeltqec aeaqeqlket lqrekatslv ltqeremlek
      901 tykehlnsmv vereqllqdl edlrnvserq qsllsnqile lkssherelk dreqvpchag
      961 tseqlvsqrl erlqrehdqe tqemmskllv mesvhratce kadreraems teisrlqnki
     1021 kemeqvvppp srlqnscqvi ggeeaeenga msllqqgeql leengdvlls lqraheravk
     1081 envkmateis rlqqrlqkle pesimsscld epatglfgns veqtepflqp nrikqaeggt
     1141 tqrilndlqg ddvrdlestg assgqrqvrv eeseasiesf selenseetr tetwdlknqv
     1201 gqlreqlmil radcdrasek kqdllfdvsv lkkklkmler iseaspkykl lyedasrene
     1261 clqeelrmme trydealesn keltsemfrl qdelkkveem tdtflsleks yneikrenee
     1321 lhvlvlrlqg kieklreraa lqcdcfslwe ahldnlevgp dekvfernqt ldehvpnvms
     1381 vhhiieehly qenqyleqen tqllekvkah eiawlhgtlq thrdkpgaqn rvileental
     1441 lglqdkhcqh qatiaelere kkklqeltrk lrervtalvk qkdvpsqgek eeelkammhd
     1501 lqitcsemqq kvellryese klqeensilr neittlneed sisnlklgkl sgsqeemwqk
     1561 ietvqqekaa vqkmvenlkk qiselktknq qldlenmkls qknsqnqkel qelnqrlaem
     1621 lsqnnkepgh saceeweqek snlkeelehc klqsstlvss leaklsevki qthiveqenl
     1681 llkdelekmk qlcrcpdlsd fqqkissils hnekllkeke alseelnicv dklaksslle
     1741 hriatmkqeq kswehqsesl ksqlvasqek vqnledtlqn vnlqmsriks dlrvtqqeke
     1801 alkqevmslh kqlqnasdkn rtpeigthps gfhnqqqsls wdkldhlmne eqqllwrend
     1861 rvptmvqntk selilsrekv rqlesnlpsp khqkhlnssg tvkpteqekl slkreceqfq
     1921 kersptnrka hlgdipgsvp dnhnkvsqik slereletih leneglkkkq vkldeqlmem
     1981 qhlrstmmls psphawelql lqqqacpvvp rehflqlqhq llqaerinqc lqeelenrts
     2041 etntpqgnqe ylvtvmeerm leveqklklv krllqekvnq lkeqlckntk adaivkdlyv
     2101 enaqllkale mteqrqktae kknylleeki aslsnivrnl tpapltstpp lrs
//
LOCUS       XP_061013375            2145 aa            linear   MAM 02-DEC-2023
DEFINITION  ninein isoform X4 [Dama dama].
ACCESSION   XP_061013375
VERSION     XP_061013375.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157392.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2145
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2145
                     /product="ninein isoform X4"
                     /calculated_mol_wt=249885
     Region          403..>1056
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          <1074..1807
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          1484..>2135
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..2145
                     /gene="NIN"
                     /coded_by="XM_061157392.1:178..6615"
                     /db_xref="GeneID:133066375"
ORIGIN      
        1 mdeaeqdqhe arlkelfdsf dttgtgslgq eeltdlchml sleevapvlq etllqdnllg
       61 rvhfdqfkea lililsrtls neehfqepas vgvscqqvar vsgpllnahk ltqsllikdc
      121 tleaqpkyvr ggkrygrrsl pefqesveef aevtviepld eeaqpshipa sersehwktq
      181 rseeyeaegq lrfwnpddlk asqsgslapq dwieeklqev cedlgitrdg hlnrkklvsi
      241 ceqyglqnvd gemleevfhn ldpdgmmsve dffyglfkng kpltpsastp yrqlkrhism
      301 qsfdesgrrt ttpsammstt gfrvfscldd gmgyasveri ldtwqeegie nsqeilkald
      361 fsldgnvnlt eltlalenel lvtknsihqa alasfkaeir hllervdqml rekeklrsdl
      421 dkaeklkslm asevddhhaa ierrneynlr kldeeykeri aalknefrke reqilqqvgk
      481 qrleleqeie kakteenyir drlalslken srlenellen aeklaeyesl tnklqrnlen
      541 vlaekfgdld pssaefflqe erltqmrney eqqcrllqdq vdelqselqe yrtqgkvfrl
      601 plknslseel dinsgciepd qglgseecnp lnmsieaelv ieqmkeqhhr dlchlrlele
      661 dkvnyyekql detkvafeke qenmklkcen evhileeqis dlknkiaelq gqtevlkeaq
      721 hmaicrheee kkqlqmmwae ekthvqeelr lehemalrar leqveegfnr ereklvqnga
      781 wteekvrglt qkleqahqeq lkslvekhil ekeelqkell ekhqrelheg rekmetecnr
      841 rtsqieaqfq adcqkvtery ehalrsleah yrqqlkelld qqceersqwe fekdeltqec
      901 aeaqeqlket lqrekatslv ltqeremlek tykehlnsmv vereqllqdl edlrnvserq
      961 qsllsnqile lkssherelk dreqvpchag tseqlvsqrl erlqrehdqe tqemmskllv
     1021 mesvhratce kadreraems teisrlqnki kemeqvvppp srlqnscqvi ggeeaeenga
     1081 msllqqgeql leengdvlls lqraheravk envkmateis rlqqrlqkle pesimsscld
     1141 epatglfgns veqtepflqp nrikqaeggt tqrilndlqg ddvrdlestg assgqrqvrv
     1201 eeseasiesf selenseetr tetwdlknqv gqlreqlmil radcdrasek kqdllfdvsv
     1261 lkkklkmler iseaspkykl lyedasrene clqeelrmme trydealesn keltsemfrl
     1321 qdelkkveem tdtflsleks yneikrenee lhvlvlrlqg kieklreraa lqcdcfslwe
     1381 ahldnlevgp dekvfernqt ldehvpnvms vhhiieehly qenqyleqen tqllekvkah
     1441 eiawlhgtlq thrdkpgaqn rvileental lglqdkhcqh qatiaelere kkklqeltrk
     1501 lrervtalvk qkdvpsqgek eeelkammhd lqitcsemqq kvellryese klqeensilr
     1561 neittlneed sisnlklgkl sgsqeemwqk ietvqqekaa vqkmvenlkk qiselktknq
     1621 qldlenmkls qknsqnqkel qelnqrlaem lsqnnkepgh saceeweqek snlkeelehc
     1681 klqlcrcpdl sdfqqkissi lshnekllke kealseelni cvdklakssl lehriatmkq
     1741 eqkswehqse slksqlvasq ekvqnledtl qnvnlqmsri ksdlrvtqqe kealkqevms
     1801 lhkqlqnasd knrtpeigth psgfhnqqqs lswdkldhlm neeqqllwre ndrvptmvqn
     1861 tkselilsre kvrqlesnlp spkhqkhlns sgtvkpteqe klslkreceq fqkersptnr
     1921 kahlgdipgs vpdnhnkvsq ikslerelet ihleneglkk kqvkldeqlm emqhlrstmm
     1981 lspsphawel qllqqqacpv vprehflqlq hqllqaerin qclqeelenr tsetntpqgn
     2041 qeylvtvmee rmleveqklk lvkrllqekv nqlkeqlckn tkadaivkdl yvenaqllka
     2101 lemteqrqkt aekknyllee kiaslsnivr nltpapltst pplrs
//
LOCUS       XP_061013376            2137 aa            linear   MAM 02-DEC-2023
DEFINITION  ninein isoform X5 [Dama dama].
ACCESSION   XP_061013376
VERSION     XP_061013376.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157393.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2137
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2137
                     /product="ninein isoform X5"
                     /calculated_mol_wt=249454
     Region          373..>1026
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          <753..1662
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          1518..>1961
                     /region_name="Mplasa_alph_rch"
                     /note="helix-rich Mycoplasma protein; TIGR04523"
                     /db_xref="CDD:275316"
     CDS             1..2137
                     /gene="NIN"
                     /coded_by="XM_061157393.1:176..6589"
                     /db_xref="GeneID:133066375"
ORIGIN      
        1 mdeaeqdqhe arlkelfdsf dttgtgslgq eeltdlchml sleevapvlq etllqdnllg
       61 rvhfdqfkea lililsrtls neehfqepdc tleaqpkyvr ggkrygrrsl pefqesveef
      121 aevtviepld eeaqpshipa sersehwktq rseeyeaegq lrfwnpddlk asqsgslapq
      181 dwieeklqev cedlgitrdg hlnrkklvsi ceqyglqnvd gemleevfhn ldpdgmmsve
      241 dffyglfkng kpltpsastp yrqlkrhism qsfdesgrrt ttpsammstt gfrvfscldd
      301 gmgyasveri ldtwqeegie nsqeilkald fsldgnvnlt eltlalenel lvtknsihqa
      361 alasfkaeir hllervdqml rekeklrsdl dkaeklkslm asevddhhaa ierrneynlr
      421 kldeeykeri aalknefrke reqilqqvgk qrleleqeie kakteenyir drlalslken
      481 srlenellen aeklaeyesl tnklqrnlen vlaekfgdld pssaefflqe erltqmrney
      541 eqqcrllqdq vdelqselqe yrtqgkvfrl plknslseel dinsgciepd qglgseecnp
      601 lnmsieaelv ieqmkeqhhr dlchlrlele dkvnyyekql detkvafeke qenmklkcen
      661 evhileeqis dlknkiaelq gqtevlkeaq hmaicrheee kkqlqmmwae ekthvqeelr
      721 lehemalrar leqveegfnr ereklvqnga wteekvrglt qkleqahqeq lkslvekhil
      781 ekeelqkell ekhqrelheg rekmetecnr rtsqieaqfq adcqkvtery ehalrsleah
      841 yrqqlkelld qqceersqwe fekdeltqec aeaqeqlket lqrekatslv ltqeremlek
      901 tykehlnsmv vereqllqdl edlrnvserq qsllsnqile lkssherelk dreqvpchag
      961 tseqlvsqrl erlqrehdqe tqemmskllv mesvhratce kadreraems teisrlqnki
     1021 kemeqvvppp srlqnscqvi ggeeaeenga msllqqgeql leengdvlls lqraheravk
     1081 envkmateis rlqqrlqkle pesimsscld epatglfgns veqtepflqp nrikqaeggt
     1141 tqrilndlqg ddvrdlestg assgqrqvrv eeseasiesf selenseetr tetwdlknqv
     1201 gqlreqlmil radcdrasek kqdllfdvsv lkkklkmler iseaspkykl lyedasrene
     1261 clqeelrmme trydealesn keltsemfrl qdelkkveem tdtflsleks yneikrenee
     1321 lhvlvlrlqg kieklreraa lqcdcfslwe ahldnlevgp dekvfernqt ldehvpnvms
     1381 vhhiieehly qenqyleqen tqllekvkah eiawlhgtlq thrdkpgaqn rvileental
     1441 lglqdkhcqh qatiaelere kkklqeltrk lrervtalvk qkdvpsqgek eeelkammhd
     1501 lqitcsemqq kvellryese klqeensilr neittlneed sisnlklgkl sgsqeemwqk
     1561 ietvqqekaa vqkmvenlkk qiselktknq qldlenmkls qknsqnqkel qelnqrlaem
     1621 lsqnnkepgh saceeweqek snlkeelehc klqsstlvss leaklsevki qthiveqenl
     1681 llkdelekmk qlcrcpdlsd fqqkissils hnekllkeke alseelnicv dklaksslle
     1741 hriatmkqeq kswehqsesl ksqlvasqek vqnledtlqn vnlqmsriks dlrvtqqeke
     1801 alkqevmslh kqlqnasdkn rtpeigthps gfhnqqqsls wdkldhlmne eqqllwrend
     1861 rvptmvqntk selilsrekv rqlesnlpsp khqkhlnssg tvkpteqekl slkreceqfq
     1921 kersptnrkv sqikslerel etihlenegl kkkqvkldeq lmemqhlrst mmlspsphaw
     1981 elqllqqqac pvvprehflq lqhqllqaer inqclqeele nrtsetntpq gnqeylvtvm
     2041 eermleveqk lklvkrllqe kvnqlkeqlc kntkadaivk dlyvenaqll kalemteqrq
     2101 ktaekknyll eekiaslsni vrnltpaplt stpplrs
//
LOCUS       XP_061013377            2050 aa            linear   MAM 02-DEC-2023
DEFINITION  ninein isoform X6 [Dama dama].
ACCESSION   XP_061013377
VERSION     XP_061013377.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157394.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2050
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2050
                     /product="ninein isoform X6"
                     /calculated_mol_wt=239404
     Region          373..>1026
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          753..1662
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          1518..>1961
                     /region_name="Mplasa_alph_rch"
                     /note="helix-rich Mycoplasma protein; TIGR04523"
                     /db_xref="CDD:275316"
     CDS             1..2050
                     /gene="NIN"
                     /coded_by="XM_061157394.1:176..6328"
                     /db_xref="GeneID:133066375"
ORIGIN      
        1 mdeaeqdqhe arlkelfdsf dttgtgslgq eeltdlchml sleevapvlq etllqdnllg
       61 rvhfdqfkea lililsrtls neehfqepdc tleaqpkyvr ggkrygrrsl pefqesveef
      121 aevtviepld eeaqpshipa sersehwktq rseeyeaegq lrfwnpddlk asqsgslapq
      181 dwieeklqev cedlgitrdg hlnrkklvsi ceqyglqnvd gemleevfhn ldpdgmmsve
      241 dffyglfkng kpltpsastp yrqlkrhism qsfdesgrrt ttpsammstt gfrvfscldd
      301 gmgyasveri ldtwqeegie nsqeilkald fsldgnvnlt eltlalenel lvtknsihqa
      361 alasfkaeir hllervdqml rekeklrsdl dkaeklkslm asevddhhaa ierrneynlr
      421 kldeeykeri aalknefrke reqilqqvgk qrleleqeie kakteenyir drlalslken
      481 srlenellen aeklaeyesl tnklqrnlen vlaekfgdld pssaefflqe erltqmrney
      541 eqqcrllqdq vdelqselqe yrtqgkvfrl plknslseel dinsgciepd qglgseecnp
      601 lnmsieaelv ieqmkeqhhr dlchlrlele dkvnyyekql detkvafeke qenmklkcen
      661 evhileeqis dlknkiaelq gqtevlkeaq hmaicrheee kkqlqmmwae ekthvqeelr
      721 lehemalrar leqveegfnr ereklvqnga wteekvrglt qkleqahqeq lkslvekhil
      781 ekeelqkell ekhqrelheg rekmetecnr rtsqieaqfq adcqkvtery ehalrsleah
      841 yrqqlkelld qqceersqwe fekdeltqec aeaqeqlket lqrekatslv ltqeremlek
      901 tykehlnsmv vereqllqdl edlrnvserq qsllsnqile lkssherelk dreqvpchag
      961 tseqlvsqrl erlqrehdqe tqemmskllv mesvhratce kadreraems teisrlqnki
     1021 kemeqvvppp srlqnscqvi ggeeaeenga msllqqgeql leengdvlls lqraheravk
     1081 envkmateis rlqqrlqkle pesimsscld epatglfgns veqtepflqp nrikqaeggt
     1141 tqrilndlqg ddvrdlestg assgqrqvrv eeseasiesf selenseetr tetwdlknqv
     1201 gqlreqlmil radcdrasek kqdllfdvsv lkkklkmler iseaspkykl lyedasrene
     1261 clqeelrmme trydealesn keltsemfrl qdelkkveem tdtflsleks yneikrenee
     1321 lhvlvlrlqg kieklreraa lqcdcfslwe ahldnlevgp dekvfernqt ldehvpnvms
     1381 vhhiieehly qenqyleqen tqllekvkah eiawlhgtlq thrdkpgaqn rvileental
     1441 lglqdkhcqh qatiaelere kkklqeltrk lrervtalvk qkdvpsqgek eeelkammhd
     1501 lqitcsemqq kvellryese klqeensilr neittlneed sisnlklgkl sgsqeemwqk
     1561 ietvqqekaa vqkmvenlkk qiselktknq qldlenmkls qknsqnqkel qelnqrlaem
     1621 lsqnnkepgh saceeweqek snlkeelehc klqsstlvss leaklsevki qthiveqenl
     1681 llkdelekmk qlcrcpdlsd fqqkissils hnekllkeke alseelnicv dklaksslle
     1741 hriatmkqeq kswehqsesl ksqlvasqek vqnledtlqn vnlqmsriks dlrvtqqeke
     1801 alkqevmslh kqlqnasdkn rtpeigthps gfhnqqqsls wdkldhlmne eqqllwrend
     1861 rvptmvqntk selilsrekv rqlesnlpsp khqkhlnssg tvkpteqekl slkreceqfq
     1921 kersptnrkv sqikslerel etihlenegl kkkqvkldeq lmemqhlrst mmlspsphaw
     1981 elqllqqqac pvvprehflq lqhqllqaer inqclqeele nrtsetntpq allpeqravh
     2041 adsyrrighl
//
LOCUS       XP_061013378             558 aa            linear   MAM 02-DEC-2023
DEFINITION  atlastin-1 isoform X1 [Dama dama].
ACCESSION   XP_061013378
VERSION     XP_061013378.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157395.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..558
                     /product="atlastin-1 isoform X1"
                     /calculated_mol_wt=63418
     Region          43..314
                     /region_name="GBP"
                     /note="Guanylate-binding protein, N-terminal domain;
                     pfam02263"
                     /db_xref="CDD:460516"
     CDS             1..558
                     /gene="ATL1"
                     /coded_by="XM_061157395.1:255..1931"
                     /db_xref="GeneID:133066376"
ORIGIN      
        1 maknrrdrns wggfsektye wsseeeepvk kagpvqvliv kddhsfelde talnrillse
       61 avrdkevvav svagafrkgk sflmdfmlry mynqesvdwv gdhnepltgf swrggseret
      121 tgiqiwseif linkpdgkkv avllmdtqgt fdsqstlrds atvfalstmi ssiqvynlsq
      181 nvqeddlqhl qlfteygrla meetflkpfq sliflvrdws fpyefsygsd ggskflekrl
      241 kvsgnqheel qnvrkhihsc ftkiscfllp hpglkvatnp nfdgklkeid defiknlkil
      301 ipwllspesl dikeingnki tcrglveyfk ayikiyqgee lphpksmlqa taeannlaav
      361 atakdtynkk meeicggdkp flapndlqtk hlelkeesvk lfrgvkkmgg eefsrrylqq
      421 leteidelyi qyikhndskn ifhaartpat lfvvifityv iagvtgfigl diiaslcnmi
      481 mgltlitlct wayirysgey relgavidqv aaalwdqgst nealyklysa aathrhlyhq
      541 afpapksest eqsekkkm
//
LOCUS       XP_061013379             553 aa            linear   MAM 02-DEC-2023
DEFINITION  atlastin-1 isoform X2 [Dama dama].
ACCESSION   XP_061013379
VERSION     XP_061013379.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157396.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..553
                     /product="atlastin-1 isoform X2"
                     /calculated_mol_wt=62929
     Region          43..314
                     /region_name="GBP"
                     /note="Guanylate-binding protein, N-terminal domain;
                     pfam02263"
                     /db_xref="CDD:460516"
     CDS             1..553
                     /gene="ATL1"
                     /coded_by="XM_061157396.1:255..1916"
                     /db_xref="GeneID:133066376"
ORIGIN      
        1 maknrrdrns wggfsektye wsseeeepvk kagpvqvliv kddhsfelde talnrillse
       61 avrdkevvav svagafrkgk sflmdfmlry mynqesvdwv gdhnepltgf swrggseret
      121 tgiqiwseif linkpdgkkv avllmdtqgt fdsqstlrds atvfalstmi ssiqvynlsq
      181 nvqeddlqhl qlfteygrla meetflkpfq sliflvrdws fpyefsygsd ggskflekrl
      241 kvsgnqheel qnvrkhihsc ftkiscfllp hpglkvatnp nfdgklkeid defiknlkil
      301 ipwllspesl dikeingnki tcrglveyfk ayikiyqgee lphpksmlqa taeannlaav
      361 atakdtynkk meeicggdkp flapndlqtk hlelkeesvk lfrgvkkmgg eefsrrylqq
      421 leteidelyi qyikhndskn ifhaartpat lfvvifityv iagvtgfigl diiaslcnmi
      481 mgltlitlct wayirysgey relgavidqv aaalwdqaly klysaaathr hlyhqafpap
      541 ksesteqsek kkm
//
LOCUS       XP_061013380             384 aa            linear   MAM 02-DEC-2023
DEFINITION  protein salvador homolog 1 [Dama dama].
ACCESSION   XP_061013380
VERSION     XP_061013380.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157397.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..384
                     /product="protein salvador homolog 1"
                     /calculated_mol_wt=44554
     Region          203..233
                     /region_name="WW"
                     /note="Two conserved tryptophans domain; also known as the
                     WWP or rsp5 domain; around 40 amino acids; functions as an
                     interaction module in a diverse set of signalling
                     proteins; binds specific proline-rich sequences but at low
                     affinities compared to other...; cd00201"
                     /db_xref="CDD:238122"
     Site            order(217,228)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          238..267
                     /region_name="WW"
                     /note="Two conserved tryptophans domain; also known as the
                     WWP or rsp5 domain; around 40 amino acids; functions as an
                     interaction module in a diverse set of signalling
                     proteins; binds specific proline-rich sequences but at low
                     affinities compared to other...; cd00201"
                     /db_xref="CDD:238122"
     Site            order(252,263)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          303..369
                     /region_name="SARAH_Sav"
                     /note="C-terminal SARAH domain of Drosophila melanogaster
                     scaffold protein salvador (Sav) and similar proteins;
                     cd21433"
                     /db_xref="CDD:439176"
     Site            order(309,312..321,325..326,328..330,333..334,336..337,
                     340..341,343..344,347..348,351..352,354..355,357..359,
                     361..363,365..366,369)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:439176"
     CDS             1..384
                     /gene="SAV1"
                     /coded_by="XM_061157397.1:255..1409"
                     /db_xref="GeneID:133066377"
ORIGIN      
        1 mlsrkktkne vskpaevqgk yvkketspll rnlmpsfirh gptiprrtdi clpdssanaf
       61 sasgdgvvsr nhsflrtpiq rtphemmrre snrlsapsyl arsladvpre ygssqsflte
      121 vnfapengds gsryyysdny fdgqrrrplg drahedyryy eynhdlfqrm pqnqgrhasg
      181 igrvaatslg nlanhgsedl plppgwsvdw tmrgrkyyid hntntthwsh plereglppg
      241 wervessefg tyyvdhtnkk aqyrhpcaps vprydqpppv tyqpqqaern qsllvpanpy
      301 htaeipdwlq vyarapvkyd hilkwelfql adldtyqgml kllfmkeleq ivkmyeayrq
      361 alltelenrk qrqqwyaqqh gknf
//
LOCUS       XP_061013381             846 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 5 [Dama
            dama].
ACCESSION   XP_061013381
VERSION     XP_061013381.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157398.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..846
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 5"
                     /calculated_mol_wt=94976
     Region          10..277
                     /region_name="STKc_MAP4K5"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Mitogen-activated protein kinase kinase kinase kinase 5;
                     cd06646"
                     /db_xref="CDD:270813"
     Site            order(26..30,34,47,49,78,94..97,100..101,104,140,142..145,
                     147,157..158,161,175..178,180,210,219)
                     /site_type="active"
                     /db_xref="CDD:270813"
     Site            order(26..30,34,47,49,78,94..97,100..101,104,144..145,147,
                     158)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270813"
     Site            order(29..30,140,142..144,161,175..178,180,210,219)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270813"
     Site            157..180
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270813"
     Region          511..826
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..846
                     /gene="MAP4K5"
                     /coded_by="XM_061157398.1:197..2737"
                     /db_xref="GeneID:133066380"
ORIGIN      
        1 meaplrpgad ilrrnpqqdy elvqrvgsgt ygdvykarni htgelaavki iklepgddfs
       61 liqqeifmvk eckhcnivay fgsylsrekl wicmeycggg slqdiyhvtg plselqiayv
      121 cretlqglay lhtkgkmhrd ikganilltd hgdvkladfg vaakitatia krksfigtpy
      181 wmapevaave knggynqlcd iwavgitaie lgelqppmfd lhpmralflm sksnfqppkl
      241 kdktkwsstf hnfvkialtk npkkrptaer llthtfvgqp glsralavel ldkvnnpdnh
      301 ahytegdddd fephavirht irstnrnara ertaseinfd klqfepplrk eteardemgv
      361 ssdpnfllrw npfvdgantg kstskraipp plppkprins ypednlpdee ksstvkrcpd
      421 senrapqvlr rqsspscgpv aetssigngd gisklmsent egsaqapqlp rkkdkrdfpk
      481 pvinglpptp kvlmgacfsk vfdgcplkin catswihpdt kdqyiifgte dgiytlnlne
      541 lheatmeqlf prkctwlyvi nntlmslseg ktfqlyshnl ialfeqakkp glaahiqthr
      601 fpdrilprkf alttkipdtk gchkccivrn pytghkylcg alqsgivllq wyepmqkfml
      661 ikhfdfplps plnvfemlvi peqeypmvcv aiskgtelnq vvqfetinln sasswfteig
      721 agnqqldsih vtqlerdtvl vcldkfvkiv nlqgklkssk klaselsfdf riesvvclqd
      781 svlafwkhgm qgksfksdev tqeisdetrv frllgsdrvv vlesrptenp tahsnlyila
      841 ghensy
//
LOCUS       XP_061013382             463 aa            linear   MAM 02-DEC-2023
DEFINITION  L-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X1 [Dama
            dama].
ACCESSION   XP_061013382
VERSION     XP_061013382.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157399.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..463
                     /product="L-2-hydroxyglutarate dehydrogenase,
                     mitochondrial isoform X1"
                     /calculated_mol_wt=50883
     Region          61..457
                     /region_name="DAO"
                     /note="FAD dependent oxidoreductase; cl40741"
                     /db_xref="CDD:477422"
     CDS             1..463
                     /gene="L2HGDH"
                     /coded_by="XM_061157399.1:75..1466"
                     /db_xref="GeneID:133066381"
ORIGIN      
        1 mvpalrylss vcgrargifp gsfsaaptpa sgksrllcqg grrastssfd iviigggivg
       61 lasaralilr hpalsigvle kekdlaihqt ghnsgvihsg iyykpeslka klcvqgaali
      121 yeycnqkgis ykqcgkliva veqeeiprlq alyerglqng vqglrliqqe dikkkepycr
      181 glmaidcpyt givdyrqval sfakdfqeag gsvltnfeve diemaresps rskdgmkypi
      241 virntkgeev qcqyvvtcag lysdrisels gcnpnprivp frgdylvlkp ekrylvkgni
      301 ypvpdsrfpf lgvhftprmd gniwlgpnai lafkregyrp fdfsardimd imiksglikl
      361 vfenfsygvn emykacflsa tvkhlqkfip eitisdilrg pagvraqald kdgnliddfv
      421 fdggvgdign rilhvrnaps paatsslais gmivdevqqr fkl
//
LOCUS       XP_061013383             407 aa            linear   MAM 02-DEC-2023
DEFINITION  L-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X2 [Dama
            dama].
ACCESSION   XP_061013383
VERSION     XP_061013383.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157400.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..407
                     /product="L-2-hydroxyglutarate dehydrogenase,
                     mitochondrial isoform X2"
                     /calculated_mol_wt=44552
     Region          61..401
                     /region_name="DAO"
                     /note="FAD dependent oxidoreductase; cl40741"
                     /db_xref="CDD:477422"
     CDS             1..407
                     /gene="L2HGDH"
                     /coded_by="XM_061157400.1:75..1298"
                     /db_xref="GeneID:133066381"
ORIGIN      
        1 mvpalrylss vcgrargifp gsfsaaptpa sgksrllcqg grrastssfd iviigggivg
       61 lasaralilr hpalsigvle kekdlaihqt ghnsgvihsg iyykpeslka klcvqgaali
      121 yeycnqkgis ykqcgkliva veqeeiprlq alyerglqng vqglrliqqe dikkkepycr
      181 glmaidcpyt givdyrqval sfakdfqeag gsvltnfeve diemaresps rskdgmkypi
      241 virntkvpds rfpflgvhft prmdgniwlg pnailafkre gyrpfdfsar dimdimiksg
      301 liklvfenfs ygvnemykac flsatvkhlq kfipeitisd ilrgpagvra qaldkdgnli
      361 ddfvfdggvg dignrilhvr napspaatss laisgmivde vqqrfkl
//
LOCUS       XP_061013385             352 aa            linear   MAM 02-DEC-2023
DEFINITION  cyclin-dependent kinase-like 1 [Dama dama].
ACCESSION   XP_061013385
VERSION     XP_061013385.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157402.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..352
                     /product="cyclin-dependent kinase-like 1"
                     /calculated_mol_wt=40491
     Region          2..287
                     /region_name="STKc_CDKL1_4"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     Cyclin-Dependent protein Kinase Like 1 and 4; cd07847"
                     /db_xref="CDD:270837"
     Site            order(10..14,18,31,33,50,64,80..83,86,88..89,126,128,
                     130..131,133,144,147,159,161..164,166,204)
                     /site_type="active"
                     /db_xref="CDD:270837"
     Site            order(10..14,18,31,33,64,80..83,86,126,128,130..131,133,
                     144)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270837"
     Site            order(50,88,126,128,147,159,161..164,166,204)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270837"
     Site            order(143..155,157..166)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270837"
     CDS             1..352
                     /gene="CDKL1"
                     /coded_by="XM_061157402.1:221..1279"
                     /db_xref="GeneID:133066382"
ORIGIN      
        1 mekyekigki gegsygvvfk crnrdtgqiv aikrflesed dpvikkialr eirmlkqlkh
       61 pnlvnlievf rrkrrlhlvf eycdhtvlhe ldrhqrgvpe hlvksitwqi lqavnfchkh
      121 scihrdvkpe nilvtkqsvi klcdfgfarl ltgpsdyytd yvatrwyrsp ellvgdtqyg
      181 ppvdvwaigc vfaellsgvp lwpgksdvdq lylirktlgd liprhqhvfs tnqyfsgvki
      241 pdpddmeple lkfpnisypa lgllkgclhm npaerltceq llqhsyfdsi rgtgdsakeq
      301 ekptkktlrq srthlpglqc lpqltsssil paldnkkycy ntkklnyhfp ni
//
LOCUS       XP_061013386             200 aa            linear   MAM 02-DEC-2023
DEFINITION  ATP synthase subunit s, mitochondrial isoform X1 [Dama dama].
ACCESSION   XP_061013386
VERSION     XP_061013386.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157403.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..200
                     /product="ATP synthase subunit s, mitochondrial isoform
                     X1"
                     /calculated_mol_wt=23177
     Region          112..139
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          140..164
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..200
                     /gene="DMAC2L"
                     /coded_by="XM_061157403.1:96..698"
                     /db_xref="GeneID:133066383"
ORIGIN      
        1 mmlfgkisqq lcglkklpws sdsryfwgwl navfnkvdhd rirdvgpdra asewllrcga
       61 mvryhgqerw qkdynhlpkg pldkykiqai datescimsi gfdhmeglqy vekirlckch
      121 yiedgclerl sqlenlrksm lemeiiscgn itdkgiialh hfrnlkylfl sdlpgvkeke
      181 kivqafktsl pslelkldlk
//
LOCUS       XP_061013387             200 aa            linear   MAM 02-DEC-2023
DEFINITION  ATP synthase subunit s, mitochondrial isoform X1 [Dama dama].
ACCESSION   XP_061013387
VERSION     XP_061013387.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157404.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..200
                     /product="ATP synthase subunit s, mitochondrial isoform
                     X1"
                     /calculated_mol_wt=23177
     Region          112..139
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          140..164
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..200
                     /gene="DMAC2L"
                     /coded_by="XM_061157404.1:142..744"
                     /db_xref="GeneID:133066383"
ORIGIN      
        1 mmlfgkisqq lcglkklpws sdsryfwgwl navfnkvdhd rirdvgpdra asewllrcga
       61 mvryhgqerw qkdynhlpkg pldkykiqai datescimsi gfdhmeglqy vekirlckch
      121 yiedgclerl sqlenlrksm lemeiiscgn itdkgiialh hfrnlkylfl sdlpgvkeke
      181 kivqafktsl pslelkldlk
//
LOCUS       XP_061013388             161 aa            linear   MAM 02-DEC-2023
DEFINITION  ATP synthase subunit s, mitochondrial isoform X2 [Dama dama].
ACCESSION   XP_061013388
VERSION     XP_061013388.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157405.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..161
                     /product="ATP synthase subunit s, mitochondrial isoform
                     X2"
                     /calculated_mol_wt=18599
     CDS             1..161
                     /gene="DMAC2L"
                     /coded_by="XM_061157405.1:97..582"
                     /db_xref="GeneID:133066383"
ORIGIN      
        1 mmlfgkisqq lcglkklpws sdsryfwgwl navfnkvdhd rirdvgpdra asewllrcga
       61 mvryhgqerw qkdynhlpkg pldkykiqai datescimsi gfdhmeglqy vekirlckch
      121 yiedgclerl sqlenlrksm lemeiiscgn itdkgtssic f
//
LOCUS       XP_061013389            1332 aa            linear   MAM 02-DEC-2023
DEFINITION  son of sevenless homolog 2 [Dama dama].
ACCESSION   XP_061013389
VERSION     XP_061013389.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157406.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1332
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1332
                     /product="son of sevenless homolog 2"
                     /calculated_mol_wt=153034
     Region          18..95
                     /region_name="HFD_SOS1_rpt1"
                     /note="first histone-fold domain found in son of sevenless
                     homolog 1 (SOS-1) and similar proteins; cd22914"
                     /db_xref="CDD:467039"
     Region          104..176
                     /region_name="HFD_SOS1_rpt2"
                     /note="second histone-fold domain found in son of
                     sevenless homolog 1 (SOS-1) and similar proteins; cd22915"
                     /db_xref="CDD:467040"
     Site            order(205,209,310,338..339,342..343,345..346,349..350,
                     353..354,357,382,386)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          207..387
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; smart00325"
                     /db_xref="CDD:214619"
     Region          437..543
                     /region_name="PH_SOS"
                     /note="Son of Sevenless (SOS) Pleckstrin homology (PH)
                     domain; cd01261"
                     /db_xref="CDD:269963"
     Region          595..739
                     /region_name="RasGEFN"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     GTPases; N-terminal motif; smart00229"
                     /db_xref="CDD:214571"
     Site            order(614,681,685..686,689,692..693,726..727,730,737)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:100121"
     Region          774..1013
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases. Small GTP-binding proteins of the Ras
                     superfamily function as molecular switches in fundamental
                     events such as signal transduction, cytoskeleton dynamics
                     and intracellular trafficking; cd00155"
                     /db_xref="CDD:238087"
     Site            order(807..809,819..820,822..824,826..827,830..831,834,
                     867,870..871,873..875,877..880,882..883,903,909..911,914,
                     927..929,932..934,936..938,940..943,961,965,1005,
                     1008..1009)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     CDS             1..1332
                     /gene="SOS2"
                     /coded_by="XM_061157406.1:50..4048"
                     /db_xref="GeneID:133066385"
ORIGIN      
        1 mqqapqpyef yseenspkwr gllvsalrkv qeqvhpnlsa neeslyyiee lifqllnklc
       61 maqprtvqdv eervqktfph pidkwaiada qsaiekrkrr nplllpvdki hpslkevlgy
      121 kvdyhvslyi vavleyisad ilklagnyvf nirhyeisqq dikvsmcadk vlmdmfdqdd
      181 iglvslcede psssgelnyy dlvrteiaee rqylrelnmi ikvfreafls drklfkpsdi
      241 ekifsnildi heltvkllgl iedtvemtde ssphplagsc fedlaeeqaf dpyetlsqdi
      301 lspkfnehfs klmarpaval hfqsiadgfk eavryvlprl mlvpvyhcwh yfellkqlkt
      361 cseeyedrec lnqaitalmn lqgsmdriyk qysprrrpgd pvcpfynrql rskhlaikkm
      421 neiqknidgw egkdigqccn efimegpltr igakherhif lfdglmisck pnhsqsrlpg
      481 cssaeyrlke kfvmrkiqic dkedtceckh afelvskden siiyaaksae eknnwmaali
      541 slqyrstldr mldsvllkee neqplrlpsp evyrfvvkds eenivfednl qsrsgipiik
      601 ggtvvklier ltyhmyadpn fvrtflttyr sfckpqells llierfeipe pepteadkla
      661 lekgeqpist dlkrfrkeyv qpvqlrilnv frhwvehhfy dferdlelle rlesfissvr
      721 gkamkkwves iakiikrkkq aqangishni tfesppppie whisrpgqfe tfdlmtlhpi
      781 eiarqltlle sdlyrkvqps elvgsvwtke dkeinspnll kmirhttnlt lwfekcivea
      841 enfeervail sriieilqvf qdlnnfngvl eivsavnsvs vyrldhtfea lqerkrkild
      901 eavelsqdhf kkylvklksi nppcvpffgi yltnilktee gnndflkkkg kdlinfskrr
      961 kvaeitgeiq qyqnqpyclr iepemrrffe nlnpmgcase keftdylfnk sleieprnck
     1021 qpprfprksa fslkspgirp ntgrhgstsg tlrghptple repckisfsr iaetelestv
     1081 saptspntps tppvsassdl svfldvdlns scgsnsifap vllphsksff sscgslhkls
     1141 eeplippplp prkkfdqdas nskgtmksdd dppaipprqp pppkvkprvp aptgpfdgpl
     1201 hspppppprd plpdtpppvp lrppehfinc pftlqppplg hlhrdpdwfr dvstcpnspn
     1261 tppstpsprv prrcyvlsss qnnlahpqap pvpprqnssp hlpklppkty krelshppmy
     1321 rlpllenaet pq
//
LOCUS       XP_061013390             229 aa            linear   MAM 02-DEC-2023
DEFINITION  protein N-lysine methyltransferase METTL21D isoform X1 [Dama dama].
ACCESSION   XP_061013390
VERSION     XP_061013390.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157407.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..229
                     /product="protein N-lysine methyltransferase METTL21D
                     isoform X1"
                     /calculated_mol_wt=25498
     Region          22..195
                     /region_name="Methyltransf_16"
                     /note="Lysine methyltransferase; pfam10294"
                     /db_xref="CDD:313513"
     Site            order(74..80,96..97,124..126,143)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
     CDS             1..229
                     /gene="VCPKMT"
                     /coded_by="XM_061157407.1:21..710"
                     /db_xref="GeneID:133066386"
ORIGIN      
        1 maaslessge dplrnfvrvl ekrdgtvlrl qqygsggvgc vvwdaaivls kyletpgfag
       61 dgahalsrrs vlelgsgtga vglmaatlga dvivtdleel qdllkmninm nkhlvtgsvq
      121 akvlkwgeel edfpsppdyi lmadciyyee slepllktlk dlsgsetcii ccyeqrtmgk
      181 npeiekkyfe llqldfdfek iplekhdeey rsedihilyi rkkkskfps
//
LOCUS       XP_061013391             201 aa            linear   MAM 02-DEC-2023
DEFINITION  protein N-lysine methyltransferase METTL21D isoform X2 [Dama dama].
ACCESSION   XP_061013391
VERSION     XP_061013391.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157408.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..201
                     /product="protein N-lysine methyltransferase METTL21D
                     isoform X2"
                     /calculated_mol_wt=22151
     Region          22..167
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     CDS             1..201
                     /gene="VCPKMT"
                     /coded_by="XM_061157408.1:21..626"
                     /db_xref="GeneID:133066386"
ORIGIN      
        1 maaslessge dplrnfvrvl ekrdgtvlrl qqygsggvgc vvwdaaivls kyletpgfag
       61 dgahalsrrs vlelgsgtga vglmaatlga dvivtdleel qdllkmninm nkhlvtgsvq
      121 akslepllkt lkdlsgsetc iiccyeqrtm gknpeiekky fellqldfdf ekiplekhde
      181 eyrsedihil yirkkkskfp s
//
LOCUS       XP_061013394            1076 aa            linear   MAM 02-DEC-2023
DEFINITION  ribosome quality control complex subunit NEMF isoform X1 [Dama
            dama].
ACCESSION   XP_061013394
VERSION     XP_061013394.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157411.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1076
                     /product="ribosome quality control complex subunit NEMF
                     isoform X1"
                     /calculated_mol_wt=122809
     Region          6..644
                     /region_name="RqcH_arch"
                     /note="ribosome rescue protein RqcH, archaeal type;
                     NF041120"
                     /db_xref="CDD:469043"
     Region          975..1066
                     /region_name="NFACT-C"
                     /note="NFACT protein C-terminal domain; pfam11923"
                     /db_xref="CDD:432191"
     CDS             1..1076
                     /gene="NEMF"
                     /coded_by="XM_061157411.1:91..3321"
                     /db_xref="GeneID:133066389"
ORIGIN      
        1 mktrfstvdl ravlaelnas llgmrvnnvy dvdnktylir lqkpdfkatl llesgiriht
       61 tefewpknmm pssfamkcrk hlksrrlvsa kqlgvdrivd fqfgsdeaay hliielydrg
      121 nivltdyeyl ilnilrfrtd esddvkfavr erypidhara aeplltlerl teilasapkg
      181 ellkrvlnpl lpygpalieh cliengfpan vkvdekfesk diekvlvclq kaeeymktts
      241 nfngkgyiiq krevkpslev dkptedilty eefhpflfsq hsqcpyiefe sfdkavdefy
      301 skiegqkidl kalqqekqal kkldnvrkdh enrlealqqa qeidklkgel iemnlqivdr
      361 aiqvvrsala nqidwteigl ivkeaqaqgd pvanaikelk lqtnhvtmll rnpyllseee
      421 dddvdgdvst ekneteppkg kkkkqknkql qkpqknrpll vdvdlslsay anakkyydhk
      481 ryaakktqkt veaaekafks aekktkqtlk evqtvtsiqk arkvywfekf lwfissenyl
      541 iiggrdqqqn eiivkryltp gdiyvhadlh gatscviknp tgepipprtl teagtmalcy
      601 saawdarvit sawwvyhhqv sktaptgeyl ttgsfmirgk knflppshlm mgfsflfkvd
      661 escvwrhrge rkvrvqdedm etlasctsel mseemeqlad ggessseedk delhetpvev
      721 elvtqvdqed itiqsggnel neliqeesse degesegvvk dqepvgemkd eeetlhypdt
      781 sidlshlqsq rslqklaske essnmsdskl qsrrhlsake rremkkkklp ndsgdlemte
      841 gkdkekenal hiethqntsk nvpvvqpmkr gqkskmkkmk ekykdqdeee relimkllgs
      901 agsnkeekgk kgkkgkikde pvkkqpqkpr ggprvsdsik ketpslevtt helqdlavdd
      961 phddkeeqdl dqqgneenlf dsltgqphse dvllfaipic apyttmtnyk ykvkltpgvq
     1021 kkgkaaktal nsfmhsreat arekdlfrsv kdtdlsrnip gkvkvsapnl lnvkrk
//
LOCUS       XP_061013395            1075 aa            linear   MAM 02-DEC-2023
DEFINITION  ribosome quality control complex subunit NEMF isoform X2 [Dama
            dama].
ACCESSION   XP_061013395
VERSION     XP_061013395.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157412.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1075
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1075
                     /product="ribosome quality control complex subunit NEMF
                     isoform X2"
                     /calculated_mol_wt=122738
     Region          6..644
                     /region_name="RqcH_arch"
                     /note="ribosome rescue protein RqcH, archaeal type;
                     NF041120"
                     /db_xref="CDD:469043"
     Region          974..1065
                     /region_name="NFACT-C"
                     /note="NFACT protein C-terminal domain; pfam11923"
                     /db_xref="CDD:432191"
     CDS             1..1075
                     /gene="NEMF"
                     /coded_by="XM_061157412.1:91..3318"
                     /db_xref="GeneID:133066389"
ORIGIN      
        1 mktrfstvdl ravlaelnas llgmrvnnvy dvdnktylir lqkpdfkatl llesgiriht
       61 tefewpknmm pssfamkcrk hlksrrlvsa kqlgvdrivd fqfgsdeaay hliielydrg
      121 nivltdyeyl ilnilrfrtd esddvkfavr erypidhara aeplltlerl teilasapkg
      181 ellkrvlnpl lpygpalieh cliengfpan vkvdekfesk diekvlvclq kaeeymktts
      241 nfngkgyiiq krevkpslev dkptedilty eefhpflfsq hsqcpyiefe sfdkavdefy
      301 skiegqkidl kalqqekqal kkldnvrkdh enrlealqqa qeidklkgel iemnlqivdr
      361 aiqvvrsala nqidwteigl ivkeaqaqgd pvanaikelk lqtnhvtmll rnpyllseee
      421 dddvdgdvst ekneteppkg kkkkqknkql qkpqknrpll vdvdlslsay anakkyydhk
      481 ryaakktqkt veaaekafks aekktkqtlk evqtvtsiqk arkvywfekf lwfissenyl
      541 iiggrdqqqn eiivkryltp gdiyvhadlh gatscviknp tgepipprtl teagtmalcy
      601 saawdarvit sawwvyhhqv sktaptgeyl ttgsfmirgk knflppshlm mgfsflfkvd
      661 escvwrhrge rkvrvqdedm etlasctsel mseemeqldg gessseedkd elhetpveve
      721 lvtqvdqedi tiqsggneln eliqeessed egesegvvkd qepvgemkde eetlhypdts
      781 idlshlqsqr slqklaskee ssnmsdsklq srrhlsaker remkkkklpn dsgdlemteg
      841 kdkekenalh iethqntskn vpvvqpmkrg qkskmkkmke kykdqdeeer elimkllgsa
      901 gsnkeekgkk gkkgkikdep vkkqpqkprg gprvsdsikk etpslevtth elqdlavddp
      961 hddkeeqdld qqgneenlfd sltgqphsed vllfaipica pyttmtnyky kvkltpgvqk
     1021 kgkaaktaln sfmhsreata rekdlfrsvk dtdlsrnipg kvkvsapnll nvkrk
//
LOCUS       XP_061013396            1065 aa            linear   MAM 02-DEC-2023
DEFINITION  ribosome quality control complex subunit NEMF isoform X3 [Dama
            dama].
ACCESSION   XP_061013396
VERSION     XP_061013396.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157413.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1065
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1065
                     /product="ribosome quality control complex subunit NEMF
                     isoform X3"
                     /calculated_mol_wt=121532
     Region          6..644
                     /region_name="RqcH_arch"
                     /note="ribosome rescue protein RqcH, archaeal type;
                     NF041120"
                     /db_xref="CDD:469043"
     Region          964..1055
                     /region_name="NFACT-C"
                     /note="NFACT protein C-terminal domain; pfam11923"
                     /db_xref="CDD:432191"
     CDS             1..1065
                     /gene="NEMF"
                     /coded_by="XM_061157413.1:91..3288"
                     /db_xref="GeneID:133066389"
ORIGIN      
        1 mktrfstvdl ravlaelnas llgmrvnnvy dvdnktylir lqkpdfkatl llesgiriht
       61 tefewpknmm pssfamkcrk hlksrrlvsa kqlgvdrivd fqfgsdeaay hliielydrg
      121 nivltdyeyl ilnilrfrtd esddvkfavr erypidhara aeplltlerl teilasapkg
      181 ellkrvlnpl lpygpalieh cliengfpan vkvdekfesk diekvlvclq kaeeymktts
      241 nfngkgyiiq krevkpslev dkptedilty eefhpflfsq hsqcpyiefe sfdkavdefy
      301 skiegqkidl kalqqekqal kkldnvrkdh enrlealqqa qeidklkgel iemnlqivdr
      361 aiqvvrsala nqidwteigl ivkeaqaqgd pvanaikelk lqtnhvtmll rnpyllseee
      421 dddvdgdvst ekneteppkg kkkkqknkql qkpqknrpll vdvdlslsay anakkyydhk
      481 ryaakktqkt veaaekafks aekktkqtlk evqtvtsiqk arkvywfekf lwfissenyl
      541 iiggrdqqqn eiivkryltp gdiyvhadlh gatscviknp tgepipprtl teagtmalcy
      601 saawdarvit sawwvyhhqv sktaptgeyl ttgsfmirgk knflppshlm mgfsflfkvd
      661 escvwrhrge rkvrvqdedm etlascttdg gessseedkd elhetpveve lvtqvdqedi
      721 tiqsggneln eliqeessed egesegvvkd qepvgemkde eetlhypdts idlshlqsqr
      781 slqklaskee ssnmsdsklq srrhlsaker remkkkklpn dsgdlemteg kdkekenalh
      841 iethqntskn vpvvqpmkrg qkskmkkmke kykdqdeeer elimkllgsa gsnkeekgkk
      901 gkkgkikdep vkkqpqkprg gprvsdsikk etpslevtth elqdlavddp hddkeeqdld
      961 qqgneenlfd sltgqphsed vllfaipica pyttmtnyky kvkltpgvqk kgkaaktaln
     1021 sfmhsreata rekdlfrsvk dtdlsrnipg kvkvsapnll nvkrk
//
LOCUS       XP_061013397            1064 aa            linear   MAM 02-DEC-2023
DEFINITION  ribosome quality control complex subunit NEMF isoform X4 [Dama
            dama].
ACCESSION   XP_061013397
VERSION     XP_061013397.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157414.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1064
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1064
                     /product="ribosome quality control complex subunit NEMF
                     isoform X4"
                     /calculated_mol_wt=121430
     Region          6..644
                     /region_name="RqcH_arch"
                     /note="ribosome rescue protein RqcH, archaeal type;
                     NF041120"
                     /db_xref="CDD:469043"
     Region          963..1054
                     /region_name="NFACT-C"
                     /note="NFACT protein C-terminal domain; pfam11923"
                     /db_xref="CDD:432191"
     CDS             1..1064
                     /gene="NEMF"
                     /coded_by="XM_061157414.1:91..3285"
                     /db_xref="GeneID:133066389"
ORIGIN      
        1 mktrfstvdl ravlaelnas llgmrvnnvy dvdnktylir lqkpdfkatl llesgiriht
       61 tefewpknmm pssfamkcrk hlksrrlvsa kqlgvdrivd fqfgsdeaay hliielydrg
      121 nivltdyeyl ilnilrfrtd esddvkfavr erypidhara aeplltlerl teilasapkg
      181 ellkrvlnpl lpygpalieh cliengfpan vkvdekfesk diekvlvclq kaeeymktts
      241 nfngkgyiiq krevkpslev dkptedilty eefhpflfsq hsqcpyiefe sfdkavdefy
      301 skiegqkidl kalqqekqal kkldnvrkdh enrlealqqa qeidklkgel iemnlqivdr
      361 aiqvvrsala nqidwteigl ivkeaqaqgd pvanaikelk lqtnhvtmll rnpyllseee
      421 dddvdgdvst ekneteppkg kkkkqknkql qkpqknrpll vdvdlslsay anakkyydhk
      481 ryaakktqkt veaaekafks aekktkqtlk evqtvtsiqk arkvywfekf lwfissenyl
      541 iiggrdqqqn eiivkryltp gdiyvhadlh gatscviknp tgepipprtl teagtmalcy
      601 saawdarvit sawwvyhhqv sktaptgeyl ttgsfmirgk knflppshlm mgfsflfkvd
      661 escvwrhrge rkvrvqdedm etlasctngg essseedkde lhetpvevel vtqvdqedit
      721 iqsggnelne liqeessede gesegvvkdq epvgemkdee etlhypdtsi dlshlqsqrs
      781 lqklaskees snmsdsklqs rrhlsakerr emkkkklpnd sgdlemtegk dkekenalhi
      841 ethqntsknv pvvqpmkrgq kskmkkmkek ykdqdeeere limkllgsag snkeekgkkg
      901 kkgkikdepv kkqpqkprgg prvsdsikke tpslevtthe lqdlavddph ddkeeqdldq
      961 qgneenlfds ltgqphsedv llfaipicap yttmtnykyk vkltpgvqkk gkaaktalns
     1021 fmhsreatar ekdlfrsvkd tdlsrnipgk vkvsapnlln vkrk
//
LOCUS       XP_061013398             422 aa            linear   MAM 02-DEC-2023
DEFINITION  kelch domain-containing protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061013398
VERSION     XP_061013398.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157415.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..422
                     /product="kelch domain-containing protein 1 isoform X1"
                     /calculated_mol_wt=48208
     Region          <10..93
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          13..65
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          63..334
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          69..121
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          124..167
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          213..261
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          264..310
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..422
                     /gene="KLHDC1"
                     /coded_by="XM_061157415.1:47..1315"
                     /db_xref="GeneID:133066390"
ORIGIN      
        1 madsqlfcva eersghcavv dgnllyvwgg yvsiednevy lpndeiwtyd idsglwtmhl
       61 megelptsms gscgacingk lyvfggyddk gysnrlyfvn lrtrdgtyvw ekitnfegqp
      121 ptprdklscw vykdrliyfg gygcrrhnel qdcfdvhdas wvrppelfia qtgfcmteeq
      181 ifwgwhndvh ifdtktqswl qpeikggipp qpraahtcav lgnkgyvfgg rvlqtrmndl
      241 hylnldtwtw sgripingen pkhrswhtlt piaddtlflf gglsadnipl sdgwihnvit
      301 ncwkqlthlp ktkprlwhta clgkeneimv fggskddlls ldtghcndll ifqtqpysll
      361 rscldcigkn aiilesqisl lppkllqqvl kkitfwtaan hreeqraqke etenkyqwis
      421 sn
//
LOCUS       XP_061013399             406 aa            linear   MAM 02-DEC-2023
DEFINITION  kelch domain-containing protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061013399
VERSION     XP_061013399.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157416.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..406
                     /product="kelch domain-containing protein 1 isoform X2"
                     /calculated_mol_wt=46416
     Region          <10..93
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          13..65
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          63..318
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          69..194
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          197..235
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          248..294
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..406
                     /gene="KLHDC1"
                     /coded_by="XM_061157416.1:47..1267"
                     /db_xref="GeneID:133066390"
ORIGIN      
        1 madsqlfcva eersghcavv dgnllyvwgg yvsiednevy lpndeiwtyd idsglwtmhl
       61 megelptsms gscgacingk lyvfggyddk gysnrlyfvn lrtrdgtyvw ekitnfegqp
      121 ptprdklscw vykdrliyfg gygcrrhnel qdcfdvhdas weeqifwgwh ndvhifdtkt
      181 qswlqpeikg gippqpraah tcavlgnkgy vfggrvlqtr mndlhylnld twtwsgripi
      241 ngenpkhrsw htltpiaddt lflfgglsad niplsdgwih nvitncwkql thlpktkprl
      301 whtaclgken eimvfggskd dllsldtghc ndllifqtqp ysllrscldc igknaiiles
      361 qisllppkll qqvlkkitfw taanhreeqr aqkeetenky qwissn
//
LOCUS       XP_061013400             395 aa            linear   MAM 02-DEC-2023
DEFINITION  kelch domain-containing protein 1 isoform X3 [Dama dama].
ACCESSION   XP_061013400
VERSION     XP_061013400.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157417.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..395
                     /product="kelch domain-containing protein 1 isoform X3"
                     /calculated_mol_wt=45298
     Region          36..307
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          43..93
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          186..234
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          237..283
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..395
                     /gene="KLHDC1"
                     /coded_by="XM_061157417.1:799..1986"
                     /db_xref="GeneID:133066390"
ORIGIN      
        1 msntksiedn evylpndeiw tydidsglwt mhlmegelpt smsgscgaci ngklyvfggy
       61 ddkgysnrly fvnlrtrdgt yvwekitnfe gqpptprdkl scwvykdrli yfggygcrrh
      121 nelqdcfdvh daswvrppel fiaqtgfcmt eeqifwgwhn dvhifdtktq swlqpeikgg
      181 ippqpraaht cavlgnkgyv fggrvlqtrm ndlhylnldt wtwsgripin genpkhrswh
      241 tltpiaddtl flfgglsadn iplsdgwihn vitncwkqlt hlpktkprlw htaclgkene
      301 imvfggskdd llsldtghcn dllifqtqpy sllrscldci gknaiilesq isllppkllq
      361 qvlkkitfwt aanhreeqra qkeetenkyq wissn
//
LOCUS       XP_061013401             394 aa            linear   MAM 02-DEC-2023
DEFINITION  kelch domain-containing protein 1 isoform X4 [Dama dama].
ACCESSION   XP_061013401
VERSION     XP_061013401.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157418.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..394
                     /product="kelch domain-containing protein 1 isoform X4"
                     /calculated_mol_wt=45390
     Region          <11..208
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          13..65
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          69..121
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          124..167
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          235..282
                     /region_name="Kelch_4"
                     /note="Galactose oxidase, central domain; pfam13418"
                     /db_xref="CDD:433191"
     Region          236..282
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..394
                     /gene="KLHDC1"
                     /coded_by="XM_061157418.1:47..1231"
                     /db_xref="GeneID:133066390"
ORIGIN      
        1 madsqlfcva eersghcavv dgnllyvwgg yvsiednevy lpndeiwtyd idsglwtmhl
       61 megelptsms gscgacingk lyvfggyddk gysnrlyfvn lrtrdgtyvw ekitnfegqp
      121 ptprdklscw vykdrliyfg gygcrrhnel qdcfdvhdas wvrppelfia qtgfcmteeq
      181 ifwgwhndvh ifdtktqswl qpeikqtrmn dlhylnldtw twsgriping enpkhrswht
      241 ltpiaddtlf lfgglsadni plsdgwihnv itncwkqlth lpktkprlwh taclgkenei
      301 mvfggskddl lsldtghcnd llifqtqpys llrscldcig knaiilesqi sllppkllqq
      361 vlkkitfwta anhreeqraq keetenkyqw issn
//
LOCUS       XP_061013402             378 aa            linear   MAM 02-DEC-2023
DEFINITION  kelch domain-containing protein 1 isoform X5 [Dama dama].
ACCESSION   XP_061013402
VERSION     XP_061013402.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157419.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..378
                     /product="kelch domain-containing protein 1 isoform X5"
                     /calculated_mol_wt=43597
     Region          <11..290
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          13..65
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          69..121
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          220..266
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..378
                     /gene="KLHDC1"
                     /coded_by="XM_061157419.1:47..1183"
                     /db_xref="GeneID:133066390"
ORIGIN      
        1 madsqlfcva eersghcavv dgnllyvwgg yvsiednevy lpndeiwtyd idsglwtmhl
       61 megelptsms gscgacingk lyvfggyddk gysnrlyfvn lrtrdgtyvw ekitnfegqp
      121 ptprdklscw vykdrliyfg gygcrrhnel qdcfdvhdas weeqifwgwh ndvhifdtkt
      181 qswlqpeikq trmndlhyln ldtwtwsgri pingenpkhr swhtltpiad dtlflfggls
      241 adniplsdgw ihnvitncwk qlthlpktkp rlwhtaclgk eneimvfggs kddllsldtg
      301 hcndllifqt qpysllrscl dcigknaiil esqisllppk llqqvlkkit fwtaanhree
      361 qraqkeeten kyqwissn
//
LOCUS       XP_061013403             346 aa            linear   MAM 02-DEC-2023
DEFINITION  kelch domain-containing protein 1 isoform X6 [Dama dama].
ACCESSION   XP_061013403
VERSION     XP_061013403.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157420.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..346
                     /product="kelch domain-containing protein 1 isoform X6"
                     /calculated_mol_wt=39442
     Region          110..>261
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          137..185
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          188..234
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..346
                     /gene="KLHDC1"
                     /coded_by="XM_061157420.1:3103..4143"
                     /db_xref="GeneID:133066390"
ORIGIN      
        1 mkyiclmmrf gpmilivgcg qctswkencl ppcqeaavla lmesctfled mmtkdtaiel
       61 iyfggygcrr hnelqdcfdv hdaswvrppe lfiaqtgfcm teeqifwgwh ndvhifdtkt
      121 qswlqpeikg gippqpraah tcavlgnkgy vfggrvlqtr mndlhylnld twtwsgripi
      181 ngenpkhrsw htltpiaddt lflfgglsad niplsdgwih nvitncwkql thlpktkprl
      241 whtaclgken eimvfggskd dllsldtghc ndllifqtqp ysllrscldc igknaiiles
      301 qisllppkll qqvlkkitfw taanhreeqr aqkeetenky qwissn
//
LOCUS       XP_061013404             406 aa            linear   MAM 02-DEC-2023
DEFINITION  kelch domain-containing protein 2 isoform X1 [Dama dama].
ACCESSION   XP_061013404
VERSION     XP_061013404.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157421.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..406
                     /product="kelch domain-containing protein 2 isoform X1"
                     /calculated_mol_wt=45964
     Region          32..91
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          32..89
                     /region_name="Kelch_4"
                     /note="Galactose oxidase, central domain; pfam13418"
                     /db_xref="CDD:433191"
     Region          78..>337
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          92..138
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          218..261
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          268..316
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..406
                     /gene="KLHDC2"
                     /coded_by="XM_061157421.1:785..2005"
                     /db_xref="GeneID:133066392"
ORIGIN      
        1 madgyedlre delpgpayeg yesaelacpa ersghvavsd grhmfvwggy ksnqvrglyd
       61 fylpreelwi ynmetgrwkk integdvpps msgscavcvd rvlylfgghh srgntnkfym
      121 ldsrstdrvl hweridcqgv ppsskdklgv wvyknkliff ggygylpedk vlgtfefdet
      181 sfwnsshprg wndhvhildt etfiwsqpit tgkppspraa hacaavgnkg fvfggryrda
      241 rmndlhylnl dtwewnelip qgicpvgrsw hsltpvssdh lflfggfttd kqplsdawty
      301 cisknewiqf nhphtekprl whtacasdeg evivfggcan nllvhhraah sneilifsvq
      361 pkslvrlsle avicfkemla nswnclpkhl lhsvnqrfgs nntsgs
//
LOCUS       XP_061013405             333 aa            linear   MAM 02-DEC-2023
DEFINITION  kelch domain-containing protein 2 isoform X2 [Dama dama].
ACCESSION   XP_061013405
VERSION     XP_061013405.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157422.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..333
                     /product="kelch domain-containing protein 2 isoform X2"
                     /calculated_mol_wt=37612
     Region          20..65
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          21..>264
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          145..188
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          195..243
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..333
                     /gene="KLHDC2"
                     /coded_by="XM_061157422.1:163..1164"
                     /db_xref="GeneID:133066392"
ORIGIN      
        1 mtsiclekns gsttwrledg scavcvdrvl ylfgghhsrg ntnkfymlds rstdrvlhwe
       61 ridcqgvpps skdklgvwvy knkliffggy gylpedkvlg tfefdetsfw nsshprgwnd
      121 hvhildtetf iwsqpittgk ppspraahac aavgnkgfvf ggryrdarmn dlhylnldtw
      181 ewnelipqgi cpvgrswhsl tpvssdhlfl fggfttdkqp lsdawtycis knewiqfnhp
      241 htekprlwht acasdegevi vfggcannll vhhraahsne ilifsvqpks lvrlsleavi
      301 cfkemlansw nclpkhllhs vnqrfgsnnt sgs
//
LOCUS       XP_061013407             175 aa            linear   MAM 02-DEC-2023
DEFINITION  ADP-ribosylation factor 6 [Dama dama].
ACCESSION   XP_061013407
VERSION     XP_061013407.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157424.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..175
                     /product="ADP-ribosylation factor 6"
                     /calculated_mol_wt=19951
     Region          1..175
                     /region_name="ARF"
                     /note="ARF-like small GTPases; ARF, ADP-ribosylation
                     factor; smart00177"
                     /db_xref="CDD:128474"
     Site            20..27
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206716"
     Site            order(22..23,27,31,43..50,72,77)
                     /site_type="other"
                     /note="putative GAP interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206716"
     Site            order(23..28,41,44,66,122..123,125,155..156)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206716"
     Site            32..47
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206716"
     Site            37..38
                     /site_type="active"
                     /note="QS Arf6 conserved motif [active]"
                     /db_xref="CDD:206716"
     Site            order(44..48,53,63,67,73,75..77)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206716"
     Site            44
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206716"
     Site            order(45..52,62,73,76..77)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206716"
     Site            47..62
                     /site_type="active"
                     /note="interswitch region [active]"
                     /db_xref="CDD:206716"
     Site            63..66
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206716"
     Site            65..80
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206716"
     Site            122..125
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206716"
     Site            155..157
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206716"
     CDS             1..175
                     /gene="ARF6"
                     /coded_by="XM_061157424.1:314..841"
                     /db_xref="GeneID:133066393"
ORIGIN      
        1 mgkvlskifg nkemrilmlg ldaagkttil yklklgqsvt tiptvgfnve tvtyknvkfn
       61 vwdvggqdki rplwrhyytg tqglifvvdc adrdridear qelhriindr emrdaiilif
      121 ankqdlpdam kpheiqeklg ltrirdrnwy vqpscatsgd glyegltwlt snyks
//
LOCUS       XP_061013408             829 aa            linear   MAM 02-DEC-2023
DEFINITION  protein kintoun isoform X1 [Dama dama].
ACCESSION   XP_061013408
VERSION     XP_061013408.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157425.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..829
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..829
                     /product="protein kintoun isoform X1"
                     /calculated_mol_wt=89885
     Region          43..204
                     /region_name="PIH1"
                     /note="PIH1 N-terminal domain; pfam08190"
                     /db_xref="CDD:369738"
     Region          <206..525
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          253..351
                     /region_name="PIH1_CS"
                     /note="PIH1 CS-like domain; pfam18201"
                     /db_xref="CDD:408028"
     CDS             1..829
                     /gene="DNAAF2"
                     /coded_by="XM_061157425.1:1279..3768"
                     /db_xref="GeneID:133066394"
ORIGIN      
        1 makaaasspl edldlsgeev qrltsafqdp efrrmfseya eeltdpenrr ryeeeitale
       61 rergvevrfv hpepghvlrt sldgtrrcfv nvcsnalvga pssqpgsgga vsgsqwslpy
      121 slapgreyaa grgtrytvyd vvfhpdaial arrherfrqm ldataleave kqfgvkldrr
      181 naktlkikyk gtpdaavlrt plsggaparp egepesplpd fpypyrypaa glsaavprpq
      241 apsppeavrq papteprysv vqrhhvdlqd yrcsrdsapg tvpqelvvti elpllrsaeq
      301 aalevtgkll cldsrkpdyr lrlslpypvd dsrgkaqfnk arrqlvvtlp vaptasrpep
      361 aaspegaanp pgtdgaaras acpveagpag vcagdassgp srtraadagi ttpdaagekr
      421 vaeseerdfg gqeistpgtg eepppgagns pgdrgggals tscgvldagl svgsasvrpt
      481 lgvearevpe ctgrepadra mggpetdrge alcpplqcsq deesltlliq vpwilpqslq
      541 gevnplwykl sfstqdlvyy sfflqfapen klstkepvvs issnnavidl akspechgyw
      601 rewyyglnny cleerlfvne dnvnefleev lsppfkqtlp ltpplievlq vtdskieiha
      661 klqecsnseq lhekeekvhe gspltekent enaststtds dssvavtvle adscgsvacl
      721 qqgaldvsqk lfaksqqpks ekegefikdk savyaneekd nlkepaitee kelngnhpss
      781 llnktavpnt pgfdhiketn mqdgsvqiik dhvthcsfsf qnsllydld
//
LOCUS       XP_061013409             753 aa            linear   MAM 02-DEC-2023
DEFINITION  protein kintoun isoform X2 [Dama dama].
ACCESSION   XP_061013409
VERSION     XP_061013409.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157426.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..753
                     /product="protein kintoun isoform X2"
                     /calculated_mol_wt=81314
     Region          43..204
                     /region_name="PIH1"
                     /note="PIH1 N-terminal domain; pfam08190"
                     /db_xref="CDD:369738"
     Region          <228..>510
                     /region_name="PRK07003"
                     /note="DNA polymerase III subunit gamma/tau"
                     /db_xref="CDD:235906"
     Region          253..351
                     /region_name="PIH1_CS"
                     /note="PIH1 CS-like domain; pfam18201"
                     /db_xref="CDD:408028"
     CDS             1..753
                     /gene="DNAAF2"
                     /coded_by="XM_061157426.1:1280..3541"
                     /db_xref="GeneID:133066394"
ORIGIN      
        1 makaaasspl edldlsgeev qrltsafqdp efrrmfseya eeltdpenrr ryeeeitale
       61 rergvevrfv hpepghvlrt sldgtrrcfv nvcsnalvga pssqpgsgga vsgsqwslpy
      121 slapgreyaa grgtrytvyd vvfhpdaial arrherfrqm ldataleave kqfgvkldrr
      181 naktlkikyk gtpdaavlrt plsggaparp egepesplpd fpypyrypaa glsaavprpq
      241 apsppeavrq papteprysv vqrhhvdlqd yrcsrdsapg tvpqelvvti elpllrsaeq
      301 aalevtgkll cldsrkpdyr lrlslpypvd dsrgkaqfnk arrqlvvtlp vaptasrpep
      361 aaspegaanp pgtdgaaras acpveagpag vcagdassgp srtraadagi ttpdaagekr
      421 vaeseerdfg gqeistpgtg eepppgagns pgdrgggals tscgvldagl svgsasvrpt
      481 lgvearevpe ctenklstke pvvsissnna vidlakspec hgywrewyyg lnnycleerl
      541 fvnednvnef leevlsppfk qtlpltppli evlqvtdski eihaklqecs nseqlhekee
      601 kvhegsplte kentenasts ttdsdssvav tvleadscgs vaclqqgald vsqklfaksq
      661 qpksekegef ikdksavyan eekdnlkepa iteekelngn hpssllnkta vpntpgfdhi
      721 ketnmqdgsv qiikdhvthc sfsfqnslly dld
//
LOCUS       XP_061013410             527 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA polymerase epsilon subunit 2 isoform X1 [Dama dama].
ACCESSION   XP_061013410
VERSION     XP_061013410.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157427.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..527
                     /product="DNA polymerase epsilon subunit 2 isoform X1"
                     /calculated_mol_wt=59372
     Region          2..74
                     /region_name="Dpoe2NT"
                     /note="DNA polymerases epsilon N terminal; pfam12213"
                     /db_xref="CDD:463494"
     Region          287..488
                     /region_name="DNA_pol_E_B"
                     /note="DNA polymerase alpha/epsilon subunit B; pfam04042"
                     /db_xref="CDD:461142"
     CDS             1..527
                     /gene="POLE2"
                     /coded_by="XM_061157427.1:23..1606"
                     /db_xref="GeneID:133066395"
ORIGIN      
        1 maperlrsra vsafklrgll lrgeavkclt ealqsineie ledaleriid avekqplssn
       61 miersvveaa vqecsqsvde tidhifniig afdiprfvys serkkflpll mtnhpapnlf
      121 gtardkaelf rerytilhqr thrhelftpp vigshpdesg skfqlktiet llgstskigd
      181 vivlgmitql kegkffledp tgtiqldlsk aqfhsglyte scfvlaegwf edqvfhvnaf
      241 gfpptepsst trayygninf fggpsntsvk tsaklkqled enkdamfvfi sdvwldqvev
      301 leklhimfsg yspapptcfi lcgnfssapy gknqvqalkd slktladiic eypnihqssr
      361 fvfvpgpedp gfgsilprpp faesitnefr qrvpfsvftt npcriqyctq eiivfredlv
      421 nkmcrncvrf pssnldipnh fvktvlsqgh ltplplyvcp vywaydyalr vypvpdllvi
      481 adkydpftlt nteclcinpg sfprsgfsfk vfypsnkive dsklqgf
//
LOCUS       XP_061013411             467 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA polymerase epsilon subunit 2 isoform X2 [Dama dama].
ACCESSION   XP_061013411
VERSION     XP_061013411.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157428.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..467
                     /product="DNA polymerase epsilon subunit 2 isoform X2"
                     /calculated_mol_wt=52697
     Region          227..428
                     /region_name="DNA_pol_E_B"
                     /note="DNA polymerase alpha/epsilon subunit B; pfam04042"
                     /db_xref="CDD:461142"
     CDS             1..467
                     /gene="POLE2"
                     /coded_by="XM_061157428.1:191..1594"
                     /db_xref="GeneID:133066395"
ORIGIN      
        1 miersvveaa vqecsqsvde tidhifniig afdiprfvys serkkflpll mtnhpapnlf
       61 gtardkaelf rerytilhqr thrhelftpp vigshpdesg skfqlktiet llgstskigd
      121 vivlgmitql kegkffledp tgtiqldlsk aqfhsglyte scfvlaegwf edqvfhvnaf
      181 gfpptepsst trayygninf fggpsntsvk tsaklkqled enkdamfvfi sdvwldqvev
      241 leklhimfsg yspapptcfi lcgnfssapy gknqvqalkd slktladiic eypnihqssr
      301 fvfvpgpedp gfgsilprpp faesitnefr qrvpfsvftt npcriqyctq eiivfredlv
      361 nkmcrncvrf pssnldipnh fvktvlsqgh ltplplyvcp vywaydyalr vypvpdllvi
      421 adkydpftlt nteclcinpg sfprsgfsfk vfypsnkive dsklqgf
//
LOCUS       XP_061013412             446 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-1,6-mannosyl-glycoprotein
            2-beta-N-acetylglucosaminyltransferase [Dama dama].
ACCESSION   XP_061013412
VERSION     XP_061013412.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157429.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..446
                     /product="alpha-1,6-mannosyl-glycoprotein
                     2-beta-N-acetylglucosaminyltransferase"
                     /calculated_mol_wt=51425
     Region          92..439
                     /region_name="MGAT2"
                     /note="N-acetylglucosaminyltransferase II (MGAT2);
                     pfam05060"
                     /db_xref="CDD:461539"
     CDS             1..446
                     /gene="MGAT2"
                     /coded_by="XM_061157429.1:475..1815"
                     /db_xref="GeneID:133066396"
ORIGIN      
        1 mrfriykrkv liltlvvaac gfvlwssngr qrknealapp lldadparga gvragdhlav
       61 svgirqgsne saaplvaaap qpevdnltlr yrslvyqlnf dqtlrnvdka gswtprelal
      121 vvqvhnrpey lkllldslrk aqgiddvlvi fshdfwstei nqliagvdfc pvlqvffpfs
      181 iqlypnefpg tdprdcprdv eknaalrmgc inaeypdsfg hyreakfsqt khhwwwklhf
      241 vwervkvlrd yaglilflee dhylapdfyh vfkkmwklkq lecpecdvls lgtytairnf
      301 ydvadkvdvk twkstehnmg laltreayqk liectdtfct yddynwdwtl qyltvsclpk
      361 fwkvlvpqvp rifhagdcgm hhqktcrpat qsaqleslln nnkqylfpet ltisekfmta
      421 lspprknggw gdirdhelck syrrlq
//
LOCUS       XP_061013413             425 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061013413
VERSION     XP_061013413.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157430.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..425
                     /product="leucine-rich repeat protein 1 isoform X1"
                     /calculated_mol_wt=47843
     Region          <166..>315
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          167..189
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          190..212
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          213..238
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          239..261
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          262..284
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          285..306
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..425
                     /gene="LRR1"
                     /coded_by="XM_061157430.1:69..1346"
                     /db_xref="GeneID:133066397"
ORIGIN      
        1 mrlhcevevv srhlpalglr nrgkgvravl slcqqaprtp pgpraggerg crhpaclfis
       61 tlkdkrgtry eqlkenieqf ftkfvdegka tvrlkeppvd iclskansss lkgflsavrl
      121 ahrgcdveap lstltpvkts efekfktkmv itskkdypls knfpyslehl qtsycglvrv
      181 dmrmlclknl rkldlshnhi kklpatigdl ihlqelnlnd nhlesfsval cqstlqkslr
      241 sldisknkik alpvqfcqlr eltdlklddn elirlpfkmg qlrklrflsa arnklpflps
      301 efknlsleyl dlfgntfeqp kvlpiihlqm pltllessar tilynripyg shiipfhlcq
      361 dldtaktcvc grysissfiq gtttmnlhsv ahtvvlvdnm ggteapiisy fcslacyvns
      421 cdmlk
//
LOCUS       XP_061013414             424 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061013414
VERSION     XP_061013414.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157431.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..424
                     /product="leucine-rich repeat protein 1 isoform X2"
                     /calculated_mol_wt=47715
     Region          <165..>314
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          166..188
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          189..211
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          212..237
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          238..260
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          261..283
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          284..305
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..424
                     /gene="LRR1"
                     /coded_by="XM_061157431.1:69..1343"
                     /db_xref="GeneID:133066397"
ORIGIN      
        1 mrlhcevevv srhlpalglr nrgkgvravl slcqqaprtp pgpraggerg crhpaclfis
       61 tlkdkrgtry elkenieqff tkfvdegkat vrlkeppvdi clskansssl kgflsavrla
      121 hrgcdveapl stltpvktse fekfktkmvi tskkdyplsk nfpyslehlq tsycglvrvd
      181 mrmlclknlr kldlshnhik klpatigdli hlqelnlndn hlesfsvalc qstlqkslrs
      241 ldisknkika lpvqfcqlre ltdlklddne lirlpfkmgq lrklrflsaa rnklpflpse
      301 fknlsleyld lfgntfeqpk vlpiihlqmp ltllessart ilynripygs hiipfhlcqd
      361 ldtaktcvcg rysissfiqg tttmnlhsva htvvlvdnmg gteapiisyf cslacyvnsc
      421 dmlk
//
LOCUS       XP_061013415             156 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat protein 1 isoform X3 [Dama dama].
ACCESSION   XP_061013415
VERSION     XP_061013415.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157432.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..156
                     /product="leucine-rich repeat protein 1 isoform X3"
                     /calculated_mol_wt=17813
     CDS             1..156
                     /gene="LRR1"
                     /coded_by="XM_061157432.1:69..539"
                     /db_xref="GeneID:133066397"
ORIGIN      
        1 mrlhcevevv srhlpalglr nrgkgvravl slcqqaprtp pgpraggerg crhpaclfis
       61 tlkdkrgtry elkenieqff tkfvdegkat vrlkeppvdi clskdsiwls yhsfpslsrf
      121 gycknlclwk iqhkqfysrn yyhestlccs hcglsr
//
LOCUS       XP_061013416             111 aa            linear   MAM 02-DEC-2023
DEFINITION  cytochrome b-c1 complex subunit 7-like [Dama dama].
ACCESSION   XP_061013416
VERSION     XP_061013416.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157433.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..111
                     /product="cytochrome b-c1 complex subunit 7-like"
                     /calculated_mol_wt=13379
     Region          9..106
                     /region_name="UCR_14kD"
                     /note="Ubiquinol-cytochrome C reductase complex 14kD
                     subunit; pfam02271"
                     /db_xref="CDD:460519"
     CDS             1..111
                     /gene="LOC133066399"
                     /coded_by="XM_061157433.1:40..375"
                     /db_xref="GeneID:133066399"
ORIGIN      
        1 magrpavsas srwlegirkw yynaagfnkl glmrddtihe nddvkeairr lpenlyndrv
       61 frikraldls mrqqilpkeq wtkheedkfy lepyleevir erkerekwak k
//
LOCUS       XP_061013417             106 aa            linear   MAM 02-DEC-2023
DEFINITION  ribosomal protein eL42-like [Dama dama].
ACCESSION   XP_061013417
VERSION     XP_061013417.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157434.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..106
                     /product="ribosomal protein eL42-like"
                     /calculated_mol_wt=12310
     Region          1..86
                     /region_name="PTZ00157"
                     /note="60S ribosomal protein L36a; Provisional"
                     /db_xref="CDD:240296"
     CDS             1..106
                     /gene="RPL36AL"
                     /coded_by="XM_061157434.1:191..511"
                     /db_xref="GeneID:133066400"
ORIGIN      
        1 mvnvpktrrt fckkcgkhqp hkvtqykkgk dslyaqgkrr ydrkqsgygg qtkpifrkka
       61 kttkkivlrl ecvepncrsk rmlaikrckh felggdkkrk gqviqf
//
LOCUS       XP_061013419              56 aa            linear   MAM 02-DEC-2023
DEFINITION  small ribosomal subunit protein uS14 [Dama dama].
ACCESSION   XP_061013419
VERSION     XP_061013419.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157436.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..56
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..56
                     /product="small ribosomal subunit protein uS14"
                     /calculated_mol_wt=6546
     Region          1..56
                     /region_name="PTZ00218"
                     /note="40S ribosomal protein S29; Provisional"
                     /db_xref="CDD:185518"
     CDS             1..56
                     /gene="RPS29"
                     /coded_by="XM_061157436.1:99..269"
                     /db_xref="GeneID:133066402"
ORIGIN      
        1 mghqqlywsh prkfgqgsrs crvcsnrhgl irkyglnmcr qcfrqyakdi gfikld
//
LOCUS       XP_061013420             643 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 62 isoform X1 [Dama dama].
ACCESSION   XP_061013420
VERSION     XP_061013420.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157437.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..643
                     /product="transmembrane protein 62 isoform X1"
                     /calculated_mol_wt=72542
     Region          57..345
                     /region_name="MPP_TMEM62_N"
                     /note="Homo sapiens TMEM62, N-terminal metallophosphatase
                     domain; cd07401"
                     /db_xref="CDD:277346"
     Site            order(63,65,99,142..143,230,257,259)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:277346"
     Site            order(63,65,99,142,230,257,259)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:277346"
     Region          <340..391
                     /region_name="Big_7"
                     /note="Bacterial Ig domain; pfam17957"
                     /db_xref="CDD:436171"
     CDS             1..643
                     /gene="TMEM62"
                     /coded_by="XM_061157437.1:1302..3233"
                     /db_xref="GeneID:133066403"
ORIGIN      
        1 maaglavrvv aglaaaalaa vflehyglag rssplpqprs prrphpapgp gagnifwglq
       61 isdihlsrfr dpgravdlet fcsetvdiiq palvlatgdl tdaktkdnlg smqqevewqt
      121 yqsilkktkv mektkwldik gnhdafnips lesvenyyrk ysavrrdgsf hyvhstpfgn
      181 ysfisldatl npgpkrpfnf fgildqkrme ellllakesr wsnhsiwfgh yttstvlsps
      241 pglrsimssa taylcghlht lgglmpvlht rhfqgtlele lgdwkdnrry rifafdhdlf
      301 sfadlifgew pvvlitnpks llyssakhep lerllhsthi rvlafslssi tsvavkidgv
      361 hlgqashlsg pifilkwnpr nysnkthnie vivqdsagrs ksvqhifsar edihlrfdll
      421 asfilltdhc tvarvtfvmi vlmqlivlii fryqaypehk gplgfinlms fslhvlskln
      481 isyysvlllt lytvlgpwfa geiikgklgc cfsfgifvdg hflqgsitfi vgilqlvffn
      541 iplmvylcwi llqrcfghsf rshlrqgkyl kiipvhllml llyiwhiysc yflhmtygtl
      601 alllsplrtw ltlatpvlir cvwslnsael gafmvrlksh lss
//
LOCUS       XP_061013421             617 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 62 isoform X2 [Dama dama].
ACCESSION   XP_061013421
VERSION     XP_061013421.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157438.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..617
                     /product="transmembrane protein 62 isoform X2"
                     /calculated_mol_wt=68948
     Region          57..345
                     /region_name="MPP_TMEM62_N"
                     /note="Homo sapiens TMEM62, N-terminal metallophosphatase
                     domain; cd07401"
                     /db_xref="CDD:277346"
     Site            order(63,65,99,142..143,230,257,259)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:277346"
     Site            order(63,65,99,142,230,257,259)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:277346"
     Region          <340..391
                     /region_name="Big_7"
                     /note="Bacterial Ig domain; pfam17957"
                     /db_xref="CDD:436171"
     CDS             1..617
                     /gene="TMEM62"
                     /coded_by="XM_061157438.1:1306..3159"
                     /db_xref="GeneID:133066403"
ORIGIN      
        1 maaglavrvv aglaaaalaa vflehyglag rssplpqprs prrphpapgp gagnifwglq
       61 isdihlsrfr dpgravdlet fcsetvdiiq palvlatgdl tdaktkdnlg smqqevewqt
      121 yqsilkktkv mektkwldik gnhdafnips lesvenyyrk ysavrrdgsf hyvhstpfgn
      181 ysfisldatl npgpkrpfnf fgildqkrme ellllakesr wsnhsiwfgh yttstvlsps
      241 pglrsimssa taylcghlht lgglmpvlht rhfqgtlele lgdwkdnrry rifafdhdlf
      301 sfadlifgew pvvlitnpks llyssakhep lerllhsthi rvlafslssi tsvavkidgv
      361 hlgqashlsg pifilkwnpr nysnkthnie vivqdsagrs ksvqhifsar edihlrfdll
      421 asfilltdhc tvarvtfvmi vlmqlivlii fryqaypehk gplgfinlms fslhvlskln
      481 isyysvlllt lytvlgpwfa geiikgklgc cfsfgifvdg hflqgsitfi vgilqlvffn
      541 iplmvylcwi llqrcfghsf rseseagllr aegawlgvrg aagccrkrtc gleeelrrqc
      601 gsgsccggll cwlltrc
//
LOCUS       XP_061013422             532 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 62 isoform X3 [Dama dama].
ACCESSION   XP_061013422
VERSION     XP_061013422.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157439.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..532
                     /product="transmembrane protein 62 isoform X3"
                     /calculated_mol_wt=60994
     Region          <2..234
                     /region_name="MPP_TMEM62_N"
                     /note="Homo sapiens TMEM62, N-terminal metallophosphatase
                     domain; cd07401"
                     /db_xref="CDD:277346"
     Region          <229..280
                     /region_name="Big_7"
                     /note="Bacterial Ig domain; pfam17957"
                     /db_xref="CDD:436171"
     CDS             1..532
                     /gene="TMEM62"
                     /coded_by="XM_061157439.1:658..2256"
                     /db_xref="GeneID:133066403"
ORIGIN      
        1 mqqevewqty qsilkktkvm ektkwldikg nhdafnipsl esvenyyrky savrrdgsfh
       61 yvhstpfgny sfisldatln pgpkrpfnff gildqkrmee llllakesrw snhsiwfghy
      121 ttstvlspsp glrsimssat aylcghlhtl gglmpvlhtr hfqgtlelel gdwkdnrryr
      181 ifafdhdlfs fadlifgewp vvlitnpksl lyssakhepl erllhsthir vlafslssit
      241 svavkidgvh lgqashlsgp ifilkwnprn ysnkthniev ivqdsagrsk svqhifsare
      301 dihlrfdlla sfilltdhct varvtfvmiv lmqlivliif ryqaypehkg plgfinlmsf
      361 slhvlsklni syysvllltl ytvlgpwfag eiikgklgcc fsfgifvdgh flqgsitfiv
      421 gilqlvffni plmvylcwil lqrcfghsfr shlrqgkylk iipvhllmll lyiwhiyscy
      481 flhmtygtla lllsplrtwl tlatpvlirc vwslnsaelg afmvrlkshl ss
//
LOCUS       XP_061013423             438 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 62 isoform X4 [Dama dama].
ACCESSION   XP_061013423
VERSION     XP_061013423.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157440.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..438
                     /product="transmembrane protein 62 isoform X4"
                     /calculated_mol_wt=49946
     Region          <2..140
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     Region          <135..186
                     /region_name="Big_7"
                     /note="Bacterial Ig domain; pfam17957"
                     /db_xref="CDD:436171"
     CDS             1..438
                     /gene="TMEM62"
                     /coded_by="XM_061157440.1:640..1956"
                     /db_xref="GeneID:133066403"
ORIGIN      
        1 mkrmeellll akesrwsnhs iwfghyttst vlspspglrs imssataylc ghlhtlgglm
       61 pvlhtrhfqg tlelelgdwk dnrryrifaf dhdlfsfadl ifgewpvvli tnpksllyss
      121 akheplerll hsthirvlaf slssitsvav kidgvhlgqa shlsgpifil kwnprnysnk
      181 thnievivqd sagrsksvqh ifsaredihl rfdllasfil ltdhctvarv tfvmivlmql
      241 ivliifryqa ypehkgplgf inlmsfslhv lsklnisyys vllltlytvl gpwfageiik
      301 gklgccfsfg ifvdghflqg sitfivgilq lvffniplmv ylcwillqrc fghsfrshlr
      361 qgkylkiipv hllmlllyiw hiyscyflhm tygtlallls plrtwltlat pvlircvwsl
      421 nsaelgafmv rlkshlss
//
LOCUS       XP_061013424             435 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 62 isoform X5 [Dama dama].
ACCESSION   XP_061013424
VERSION     XP_061013424.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157441.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..435
                     /product="transmembrane protein 62 isoform X5"
                     /calculated_mol_wt=49531
     Region          <1..137
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     Region          <132..183
                     /region_name="Big_7"
                     /note="Bacterial Ig domain; pfam17957"
                     /db_xref="CDD:436171"
     CDS             1..435
                     /gene="TMEM62"
                     /coded_by="XM_061157441.1:865..2172"
                     /db_xref="GeneID:133066403"
ORIGIN      
        1 meellllake srwsnhsiwf ghyttstvls pspglrsims sataylcghl htlgglmpvl
       61 htrhfqgtle lelgdwkdnr ryrifafdhd lfsfadlifg ewpvvlitnp ksllyssakh
      121 eplerllhst hirvlafsls sitsvavkid gvhlgqashl sgpifilkwn prnysnkthn
      181 ievivqdsag rsksvqhifs aredihlrfd llasfilltd hctvarvtfv mivlmqlivl
      241 iifryqaype hkgplgfinl msfslhvlsk lnisyysvll ltlytvlgpw fageiikgkl
      301 gccfsfgifv dghflqgsit fivgilqlvf fniplmvylc willqrcfgh sfrshlrqgk
      361 ylkiipvhll mlllyiwhiy scyflhmtyg tlalllsplr twltlatpvl ircvwslnsa
      421 elgafmvrlk shlss
//
LOCUS       XP_061013425             435 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 62 isoform X5 [Dama dama].
ACCESSION   XP_061013425
VERSION     XP_061013425.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157442.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..435
                     /product="transmembrane protein 62 isoform X5"
                     /calculated_mol_wt=49531
     Region          <1..137
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     Region          <132..183
                     /region_name="Big_7"
                     /note="Bacterial Ig domain; pfam17957"
                     /db_xref="CDD:436171"
     CDS             1..435
                     /gene="TMEM62"
                     /coded_by="XM_061157442.1:790..2097"
                     /db_xref="GeneID:133066403"
ORIGIN      
        1 meellllake srwsnhsiwf ghyttstvls pspglrsims sataylcghl htlgglmpvl
       61 htrhfqgtle lelgdwkdnr ryrifafdhd lfsfadlifg ewpvvlitnp ksllyssakh
      121 eplerllhst hirvlafsls sitsvavkid gvhlgqashl sgpifilkwn prnysnkthn
      181 ievivqdsag rsksvqhifs aredihlrfd llasfilltd hctvarvtfv mivlmqlivl
      241 iifryqaype hkgplgfinl msfslhvlsk lnisyysvll ltlytvlgpw fageiikgkl
      301 gccfsfgifv dghflqgsit fivgilqlvf fniplmvylc willqrcfgh sfrshlrqgk
      361 ylkiipvhll mlllyiwhiy scyflhmtyg tlalllsplr twltlatpvl ircvwslnsa
      421 elgafmvrlk shlss
//
LOCUS       XP_061013426             554 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 62 isoform X6 [Dama dama].
ACCESSION   XP_061013426
VERSION     XP_061013426.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157443.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..554
                     /product="transmembrane protein 62 isoform X6"
                     /calculated_mol_wt=62316
     Region          57..256
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     Region          <251..302
                     /region_name="Big_7"
                     /note="Bacterial Ig domain; pfam17957"
                     /db_xref="CDD:436171"
     CDS             1..554
                     /gene="TMEM62"
                     /coded_by="XM_061157443.1:1309..2973"
                     /db_xref="GeneID:133066403"
ORIGIN      
        1 maaglavrvv aglaaaalaa vflehyglag rssplpqprs prrphpapgp gagnifwglq
       61 isdihlsrfr dpgravdlet fcsetvdiiq palvlatgdl tdaktkdnlg smqqevewqt
      121 yqsilkktkv mektkwldik gnhetdggaf vtgqgkpleq pqylvwtlyn ihcpfsitrt
      181 svnnegtlel elgdwkdnrr yrifafdhdl fsfadlifge wpvvlitnpk sllyssakhe
      241 plerllhsth irvlafslss itsvavkidg vhlgqashls gpifilkwnp rnysnkthni
      301 evivqdsagr sksvqhifsa redihlrfdl lasfilltdh ctvarvtfvm ivlmqlivli
      361 ifryqaypeh kgplgfinlm sfslhvlskl nisyysvlll tlytvlgpwf ageiikgklg
      421 ccfsfgifvd ghflqgsitf ivgilqlvff niplmvylcw illqrcfghs frshlrqgky
      481 lkiipvhllm lllyiwhiys cyflhmtygt lalllsplrt wltlatpvli rcvwslnsae
      541 lgafmvrlks hlss
//
LOCUS       XP_061013427             359 aa            linear   MAM 02-DEC-2023
DEFINITION  cyclin-D1-binding protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061013427
VERSION     XP_061013427.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157444.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..359
                     /product="cyclin-D1-binding protein 1 isoform X1"
                     /calculated_mol_wt=39569
     Region          55..319
                     /region_name="GCIP"
                     /note="Grap2 and cyclin-D-interacting; pfam13324"
                     /db_xref="CDD:463844"
     CDS             1..359
                     /gene="CCNDBP1"
                     /coded_by="XM_061157444.1:34..1113"
                     /db_xref="GeneID:133066405"
ORIGIN      
        1 mesaavtaap dptldppleq lrhlagelre llpgvrvgea qettkefdre afwrrlneaa
       61 vtvsreattl tvafsrlplp spqetqrfce qvhaaikaii avyslfpkdq gitlrklvrs
      121 atldivddma qlvealyinp aqsspenlis ynsvwdacqr vpqipkdnka aalsvltksv
      181 dlvkdaheem eqaveecdpy cgllndieed ssdnhvgeed ilgcpnnrds ywseedqeli
      241 ipclalaras kaclkkirls vaengkkdqv aqlddivdis deispsvddl alsiyppvcp
      301 ltvrissakl vsvlkkalei tkashvtpqp edswipllin avdhcmnrik eltqneves
//
LOCUS       XP_061013428             358 aa            linear   MAM 02-DEC-2023
DEFINITION  cyclin-D1-binding protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061013428
VERSION     XP_061013428.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157445.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..358
                     /product="cyclin-D1-binding protein 1 isoform X2"
                     /calculated_mol_wt=39482
     Region          55..318
                     /region_name="GCIP"
                     /note="Grap2 and cyclin-D-interacting; pfam13324"
                     /db_xref="CDD:463844"
     CDS             1..358
                     /gene="CCNDBP1"
                     /coded_by="XM_061157445.1:34..1110"
                     /db_xref="GeneID:133066405"
ORIGIN      
        1 mesaavtaap dptldppleq lrhlagelre llpgvrvgea qettkefdre afwrrlneaa
       61 vtvsreattl tvafsrlplp spqetqrfce qvhaaikaii avyslfpkdq gitlrklvrs
      121 atldivddma qlvealyinp aqspenlisy nsvwdacqrv pqipkdnkaa alsvltksvd
      181 lvkdaheeme qaveecdpyc gllndieeds sdnhvgeedi lgcpnnrdsy wseedqelii
      241 pclalarask aclkkirlsv aengkkdqva qlddivdisd eispsvddla lsiyppvcpl
      301 tvrissaklv svlkkaleit kashvtpqpe dswipllina vdhcmnrike ltqneves
//
LOCUS       XP_061013429            1753 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase UBR1 [Dama dama].
ACCESSION   XP_061013429
VERSION     XP_061013429.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157446.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1753
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1753
                     /product="E3 ubiquitin-protein ligase UBR1"
                     /calculated_mol_wt=200447
     Region          98..168
                     /region_name="UBR-box_UBR1"
                     /note="UBR-box found in ubiquitin-protein ligase
                     E3-alpha-1 (UBR1) and similar proteins; cd19678"
                     /db_xref="CDD:439076"
     Site            order(99,112,115,124,127,133,136,149,151,163,166)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:439076"
     Region          221..301
                     /region_name="ClpS"
                     /note="ATP-dependent Clp protease adaptor protein ClpS;
                     pfam02617"
                     /db_xref="CDD:460621"
     Region          1097..1215
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(1101,1104,1162,1164,1167,1170,1200,1203)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438346"
     Region          1301..1728
                     /region_name="PRT6_C"
                     /note="Proteolysis_6 C-terminal; pfam18995"
                     /db_xref="CDD:465944"
     CDS             1..1753
                     /gene="UBR1"
                     /coded_by="XM_061157446.1:140..5401"
                     /db_xref="GeneID:133066406"
ORIGIN      
        1 madeeagdte rmevstelpq tpqqlaswwd qqidfyttfl nylaqvvpei yfaemdpdle
       61 kqeesiqrsi ftplewylfg edpdiclekl khsgafqlcg kvfksgetty scrdcaidpt
      121 cvlcmdcfqn svhknhrykm htstgggfcd cgdteawktg pfcishepgr agttkenlrc
      181 plneeviaqa rkifpsviky ivemtiweee kelppelqkr ekndryycvl fndehhsydh
      241 viyslqrald celaeaqlht taidkegrra vkagafaacq eakedikshs envsqhplhv
      301 evlhsevmah qkfalrlgsw mnkimsyssd frqifcqacl reepgsenpc lisrlmlwda
      361 klykgarkil helifssffm emeykkffam efvkyykqlq keyisddhdr sisvtalsvq
      421 mftvptlarh lieeqnvisv itetllevlp eyldrnnkfn fqgysqdklg rvyavicdlk
      481 yiliskptiw terlrmqfle gfrsflkilt cmqgmeeirr qvgqhievdp dweaaiaiqm
      541 qlknillmfq ewcacdeell lvaykechka vmrcstgfks ssktviqlcg htletksykv
      601 sedlvsihlp lsrtlaglhv rlsrlgavsr lhefvpfgdf qvevlveypl rclvlvaqvv
      661 aemwrrngls lisqvfyyqd vkcreemydk diimlqigas lmdpnkflll vlqryelada
      721 fnktisikdq dlvkqyntli eemlqvliyi vgeryvpgvg nvtkeevtmr eiihllciep
      781 mphsaiaknl penennetgl envinkvatf kkpgvsghgv yelkdeslkd fnmyfyhysk
      841 tqhskaehmq kkrrkqenkd ealppppppe fcpafskavn llncdimmyi lrtiferavd
      901 pdsnlwtegm lqmafhilal glleekqqlq kspeeevtfd fyhkasrlgs samnaqniqm
      961 lleklkgipq legqkdmitw ilqmfdtvkr lrekscliva ttsgsdsikn deithdkeka
     1021 erkrkaeaar lhrqkimaqm salqknfiet hklmydstse msgkedsime eestpavsdy
     1081 srialgpkrg psvtekevlt cilcqeeqev kiennamvls acvqkstalt qhrgkpiels
     1141 getmdplfmd adlaygtytg scghvmhavc wqkyfeavql ssqqrihvdl fdlesgeylc
     1201 plckslcntv ipiiplqhqk issentepla qvltlerwiq tvlaritgyn mkhakgenpt
     1261 ipvlfdqgmg dstldfnsil sygvqssfny snsikemvll fattiyrigl kvppdetdpr
     1321 ipmmtwstca ftiqaienll gdegkplfga lqnrqhnglk almqfaiaqr itcsqvlirk
     1381 hlirllsvvl pnlqseatpc llsidlfhvl vgtvlafpsl ywddavdlqp spvsssynhl
     1441 ylfhlitmah mlqilltidt glplaqiqee seearsassf laevsqytsg cigcgipgwy
     1501 lwvslkngii pylrcaalff hyllgvtppe elftnaaege ynalcsylsl ptnlfllfqk
     1561 ywdtvrpllq rwctdpalln clkqkstvvr yprkrnslie lpddysclln qashfrcprs
     1621 adderkhpvl clfcgailcs qniccqetvn geevgacifh alhcgagvci flkirecrvv
     1681 lvegkargca ypapyldeyg etdpglkrgn plhlsreryr klhlvwqqhc iieeiarsqe
     1741 tnqmlfgfnw qll
//
LOCUS       XP_061013431            1252 aa            linear   MAM 02-DEC-2023
DEFINITION  tau-tubulin kinase 2 isoform X1 [Dama dama].
ACCESSION   XP_061013431
VERSION     XP_061013431.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157448.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1252
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1252
                     /product="tau-tubulin kinase 2 isoform X1"
                     /calculated_mol_wt=138272
     Region          20..281
                     /region_name="STKc_TTBK2"
                     /note="Catalytic domain of the Serine/Threonine protein
                     kinase, Tau-Tubulin Kinase 2; cd14129"
                     /db_xref="CDD:271031"
     Site            order(27..31,35,48,50,78,94..97,100,102,141,143,145..146,
                     148,163,166,188..191)
                     /site_type="active"
                     /db_xref="CDD:271031"
     Site            order(27..31,35,48,50,78,94..97,100,141,143,145..146,148,
                     163)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271031"
     Site            order(31,100,102,141,143,145,166,188..191)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271031"
     Site            order(162..168,188..191)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271031"
     CDS             1..1252
                     /gene="TTBK2"
                     /coded_by="XM_061157448.1:479..4237"
                     /db_xref="GeneID:133066407"
ORIGIN      
        1 msgggeqpdi lsvgilvker wkvlrkiggg gfgeiydald mltrenvalk vesaqqpkqv
       61 lkmevavlkk lqgkdhvcrf igcgrndrfn yvvmqlqgrn ladlrrsqsr gtftisttlr
      121 lgrqilesie sihsvgflhr dikpsnfamg rfpstcrkcy mldfglarqf tnscgdvrpp
      181 ravagfrgtv ryasvnahrn remgrhddlw slfymlvefv vgqlpwrkik dkeqvgsike
      241 ryehrlmlkh lppefsifle hiasldyftk pdyqlltsvf dnsikafgvi esdpfdwekt
      301 gtdgsltttt asttpqlhtr ltpaaigian atpipgdmlr entdevfpde qlsdgengip
      361 vgvlpdklpg slghphpqek dvweemdtnr nkiklgicka ateeenshgq angilnapsl
      421 gspirvrsei tqpdrdvplv rklrsihsfe lekrlalepk pdtdkfletc lekmqkdpsa
      481 gkestlpall hkpcvpavsr adhiwhydee ylpdaskpas antpeqadgg gsngfvavnl
      541 ssckqevdsk ewvivdkeqd lqdfrtneal ghkttgspsd eepevlqvle espqdeklql
      601 gpwaendhlk ketsgvvfvl sgecpataas eqytdrlelq agaasqfitv tptspmeaqa
      661 egpltaitip rpsvastqst sgsfhygqqp ekkdlhtiep tvelyspren fsglvviege
      721 ppsggsrtdl glqidhighd mlpnireydr sqdlgpkdlp dhnrlavref eglpreleek
      781 silvgsdnee eklskgqhyi eisplpgdlv tmerdhsats epldvtktqt fsvvpnqdkn
      841 heimkllavg psevsprvid pyveeqigqv aamqkskisk eddlrgedlp nhsgdlstfl
      901 hqegkrekia prngelfnpv senehcppsr kdvvrssfvt rhsripvlaq eidstfdsss
      961 pvsakekllq kkacqpdlvk llvekrqlrs llgdlssasd klleerlatv papfseeevf
     1021 tpfsrlaaes hlsrsaedsf lapiisqsrk skiprpvswv ntdqvnsstp sqflprpppg
     1081 kppmrpgvea rlrrykvlgs snsdsdlfsr laqilqngsq kprsttqcks pgtphnpktp
     1141 pkspvvprrs psasprsssl prtsssspsr agrphhdqrs ssphlgrsks ppshsgssss
     1201 rrscqqehck psknglkgsg sfhhhsasak appgkngtan qknslieqdk le
//
LOCUS       XP_061013432            1252 aa            linear   MAM 02-DEC-2023
DEFINITION  tau-tubulin kinase 2 isoform X1 [Dama dama].
ACCESSION   XP_061013432
VERSION     XP_061013432.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157449.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1252
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1252
                     /product="tau-tubulin kinase 2 isoform X1"
                     /calculated_mol_wt=138272
     Region          20..281
                     /region_name="STKc_TTBK2"
                     /note="Catalytic domain of the Serine/Threonine protein
                     kinase, Tau-Tubulin Kinase 2; cd14129"
                     /db_xref="CDD:271031"
     Site            order(27..31,35,48,50,78,94..97,100,102,141,143,145..146,
                     148,163,166,188..191)
                     /site_type="active"
                     /db_xref="CDD:271031"
     Site            order(27..31,35,48,50,78,94..97,100,141,143,145..146,148,
                     163)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271031"
     Site            order(31,100,102,141,143,145,166,188..191)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271031"
     Site            order(162..168,188..191)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271031"
     CDS             1..1252
                     /gene="TTBK2"
                     /coded_by="XM_061157449.1:422..4180"
                     /db_xref="GeneID:133066407"
ORIGIN      
        1 msgggeqpdi lsvgilvker wkvlrkiggg gfgeiydald mltrenvalk vesaqqpkqv
       61 lkmevavlkk lqgkdhvcrf igcgrndrfn yvvmqlqgrn ladlrrsqsr gtftisttlr
      121 lgrqilesie sihsvgflhr dikpsnfamg rfpstcrkcy mldfglarqf tnscgdvrpp
      181 ravagfrgtv ryasvnahrn remgrhddlw slfymlvefv vgqlpwrkik dkeqvgsike
      241 ryehrlmlkh lppefsifle hiasldyftk pdyqlltsvf dnsikafgvi esdpfdwekt
      301 gtdgsltttt asttpqlhtr ltpaaigian atpipgdmlr entdevfpde qlsdgengip
      361 vgvlpdklpg slghphpqek dvweemdtnr nkiklgicka ateeenshgq angilnapsl
      421 gspirvrsei tqpdrdvplv rklrsihsfe lekrlalepk pdtdkfletc lekmqkdpsa
      481 gkestlpall hkpcvpavsr adhiwhydee ylpdaskpas antpeqadgg gsngfvavnl
      541 ssckqevdsk ewvivdkeqd lqdfrtneal ghkttgspsd eepevlqvle espqdeklql
      601 gpwaendhlk ketsgvvfvl sgecpataas eqytdrlelq agaasqfitv tptspmeaqa
      661 egpltaitip rpsvastqst sgsfhygqqp ekkdlhtiep tvelyspren fsglvviege
      721 ppsggsrtdl glqidhighd mlpnireydr sqdlgpkdlp dhnrlavref eglpreleek
      781 silvgsdnee eklskgqhyi eisplpgdlv tmerdhsats epldvtktqt fsvvpnqdkn
      841 heimkllavg psevsprvid pyveeqigqv aamqkskisk eddlrgedlp nhsgdlstfl
      901 hqegkrekia prngelfnpv senehcppsr kdvvrssfvt rhsripvlaq eidstfdsss
      961 pvsakekllq kkacqpdlvk llvekrqlrs llgdlssasd klleerlatv papfseeevf
     1021 tpfsrlaaes hlsrsaedsf lapiisqsrk skiprpvswv ntdqvnsstp sqflprpppg
     1081 kppmrpgvea rlrrykvlgs snsdsdlfsr laqilqngsq kprsttqcks pgtphnpktp
     1141 pkspvvprrs psasprsssl prtsssspsr agrphhdqrs ssphlgrsks ppshsgssss
     1201 rrscqqehck psknglkgsg sfhhhsasak appgkngtan qknslieqdk le
//
LOCUS       XP_061013433            1244 aa            linear   MAM 02-DEC-2023
DEFINITION  tau-tubulin kinase 2 isoform X2 [Dama dama].
ACCESSION   XP_061013433
VERSION     XP_061013433.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157450.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1244
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1244
                     /product="tau-tubulin kinase 2 isoform X2"
                     /calculated_mol_wt=137333
     Region          20..281
                     /region_name="STKc_TTBK2"
                     /note="Catalytic domain of the Serine/Threonine protein
                     kinase, Tau-Tubulin Kinase 2; cd14129"
                     /db_xref="CDD:271031"
     Site            order(27..31,35,48,50,78,94..97,100,102,141,143,145..146,
                     148,163,166,188..191)
                     /site_type="active"
                     /db_xref="CDD:271031"
     Site            order(27..31,35,48,50,78,94..97,100,141,143,145..146,148,
                     163)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271031"
     Site            order(31,100,102,141,143,145,166,188..191)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271031"
     Site            order(162..168,188..191)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271031"
     CDS             1..1244
                     /gene="TTBK2"
                     /coded_by="XM_061157450.1:479..4213"
                     /db_xref="GeneID:133066407"
ORIGIN      
        1 msgggeqpdi lsvgilvker wkvlrkiggg gfgeiydald mltrenvalk vesaqqpkqv
       61 lkmevavlkk lqgkdhvcrf igcgrndrfn yvvmqlqgrn ladlrrsqsr gtftisttlr
      121 lgrqilesie sihsvgflhr dikpsnfamg rfpstcrkcy mldfglarqf tnscgdvrpp
      181 ravagfrgtv ryasvnahrn remgrhddlw slfymlvefv vgqlpwrkik dkeqvgsike
      241 ryehrlmlkh lppefsifle hiasldyftk pdyqlltsvf dnsikafgvi esdpfdwekt
      301 gtdgsltttt asttpqlhtr ltpaaigian atpipgdmlr entdevfpde qlsdgengip
      361 vgvlpdklpg slghphpqek dvweemdtnr nkiklgicka ateeenshgq angilnapsl
      421 gspirvrsei tqpdrdvplv rklrsihsfe lekrlalepk pdtdkfletc lekmqkdpsa
      481 gkestlpall hkpcvpavsr adhiwhydee ylpdaskpas antpeqadgg gsngfvavnl
      541 ssckqevdsk ewvivdkeqd lqdfrtneal ghkttgspsd eepevlqvle espqdeklql
      601 gpwaendhlk ketsgvvfvl sgecpataas eqytdrlelq agaasqfitv tptspmeaqa
      661 egpltaitip rpsvastqst sgsfhygqqp ekkdlhtiep tvelyspren fsglvviege
      721 ppsggsrtdl glqidhighd mlpnireydr sqdlgpkdlp dhnrlavref eglpreleek
      781 silvgsdnee eklskgqhyi eisplpgdlv tmerdhsats epldvtktqt fsvvpnqdkn
      841 heimkllavg psevsprvid pyveeqigqv aamqkskisk eddlrgedlp nhsgdlstfl
      901 hqegkrekia prngelfnpv senehcppsr kdvvrssfvt rhsripvlaq eidstfdsss
      961 pvsakekllq kkacqpdlvk llvekrqlrs llgdlssasd klleerlatv papfseeevf
     1021 tpfsrlaaes hlsrsaedsf lapiisqsrk skiprpvswv ntdqvnsstp sqflprpppg
     1081 kppmrpgvea rlrrykvlgs snsdsdlfsr laqilqngsq kprsttqcks pgtphnpktp
     1141 pkspvvprrs psasprsssl prtsssspsr agrphhdqrs ssphlgrsks ppshsgssss
     1201 rrscqqehck psknglkgsg sfhhhsasak appgksksas klsr
//
LOCUS       XP_061013434            1159 aa            linear   MAM 02-DEC-2023
DEFINITION  tau-tubulin kinase 2 isoform X3 [Dama dama].
ACCESSION   XP_061013434
VERSION     XP_061013434.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157451.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1159
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1159
                     /product="tau-tubulin kinase 2 isoform X3"
                     /calculated_mol_wt=127957
     Region          <1..188
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..1159
                     /gene="TTBK2"
                     /coded_by="XM_061157451.1:314..3793"
                     /db_xref="GeneID:133066407"
ORIGIN      
        1 mqlqgrnlad lrrsqsrgtf tisttlrlgr qilesiesih svgflhrdik psnfamgrfp
       61 stcrkcymld fglarqftns cgdvrpprav agfrgtvrya svnahrnrem grhddlwslf
      121 ymlvefvvgq lpwrkikdke qvgsikerye hrlmlkhlpp efsiflehia sldyftkpdy
      181 qlltsvfdns ikafgviesd pfdwektgtd gslttttast tpqlhtrltp aaigianatp
      241 ipgdmlrent devfpdeqls dgengipvgv lpdklpgslg hphpqekdvw eemdtnrnki
      301 klgickaate eenshgqang ilnapslgsp irvrseitqp drdvplvrkl rsihsfelek
      361 rlalepkpdt dkfletclek mqkdpsagke stlpallhkp cvpavsradh iwhydeeylp
      421 daskpasant peqadgggsn gfvavnlssc kqevdskewv ivdkeqdlqd frtnealghk
      481 ttgspsdeep evlqvleesp qdeklqlgpw aendhlkket sgvvfvlsge cpataaseqy
      541 tdrlelqaga asqfitvtpt spmeaqaegp ltaitiprps vastqstsgs fhygqqpekk
      601 dlhtieptve lysprenfsg lvviegepps ggsrtdlglq idhighdmlp nireydrsqd
      661 lgpkdlpdhn rlavrefegl preleeksil vgsdneeekl skgqhyieis plpgdlvtme
      721 rdhsatsepl dvtktqtfsv vpnqdknhei mkllavgpse vsprvidpyv eeqigqvaam
      781 qkskiskedd lrgedlpnhs gdlstflhqe gkrekiaprn gelfnpvsen ehcppsrkdv
      841 vrssfvtrhs ripvlaqeid stfdssspvs akekllqkka cqpdlvkllv ekrqlrsllg
      901 dlssasdkll eerlatvpap fseeevftpf srlaaeshls rsaedsflap iisqsrkski
      961 prpvswvntd qvnsstpsqf lprpppgkpp mrpgvearlr rykvlgssns dsdlfsrlaq
     1021 ilqngsqkpr sttqckspgt phnpktppks pvvprrspsa sprssslprt sssspsragr
     1081 phhdqrsssp hlgrskspps hsgssssrrs cqqehckpsk nglkgsgsfh hhsasakapp
     1141 gkngtanqkn slieqdkle
//
LOCUS       XP_061013435            1112 aa            linear   MAM 02-DEC-2023
DEFINITION  tau-tubulin kinase 2 isoform X4 [Dama dama].
ACCESSION   XP_061013435
VERSION     XP_061013435.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157452.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1112
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1112
                     /product="tau-tubulin kinase 2 isoform X4"
                     /calculated_mol_wt=122641
     Region          <5..141
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..1112
                     /gene="TTBK2"
                     /coded_by="XM_061157452.1:314..3652"
                     /db_xref="GeneID:133066407"
ORIGIN      
        1 mqlqsnfamg rfpstcrkcy mldfglarqf tnscgdvrpp ravagfrgtv ryasvnahrn
       61 remgrhddlw slfymlvefv vgqlpwrkik dkeqvgsike ryehrlmlkh lppefsifle
      121 hiasldyftk pdyqlltsvf dnsikafgvi esdpfdwekt gtdgsltttt asttpqlhtr
      181 ltpaaigian atpipgdmlr entdevfpde qlsdgengip vgvlpdklpg slghphpqek
      241 dvweemdtnr nkiklgicka ateeenshgq angilnapsl gspirvrsei tqpdrdvplv
      301 rklrsihsfe lekrlalepk pdtdkfletc lekmqkdpsa gkestlpall hkpcvpavsr
      361 adhiwhydee ylpdaskpas antpeqadgg gsngfvavnl ssckqevdsk ewvivdkeqd
      421 lqdfrtneal ghkttgspsd eepevlqvle espqdeklql gpwaendhlk ketsgvvfvl
      481 sgecpataas eqytdrlelq agaasqfitv tptspmeaqa egpltaitip rpsvastqst
      541 sgsfhygqqp ekkdlhtiep tvelyspren fsglvviege ppsggsrtdl glqidhighd
      601 mlpnireydr sqdlgpkdlp dhnrlavref eglpreleek silvgsdnee eklskgqhyi
      661 eisplpgdlv tmerdhsats epldvtktqt fsvvpnqdkn heimkllavg psevsprvid
      721 pyveeqigqv aamqkskisk eddlrgedlp nhsgdlstfl hqegkrekia prngelfnpv
      781 senehcppsr kdvvrssfvt rhsripvlaq eidstfdsss pvsakekllq kkacqpdlvk
      841 llvekrqlrs llgdlssasd klleerlatv papfseeevf tpfsrlaaes hlsrsaedsf
      901 lapiisqsrk skiprpvswv ntdqvnsstp sqflprpppg kppmrpgvea rlrrykvlgs
      961 snsdsdlfsr laqilqngsq kprsttqcks pgtphnpktp pkspvvprrs psasprsssl
     1021 prtsssspsr agrphhdqrs ssphlgrsks ppshsgssss rrscqqehck psknglkgsg
     1081 sfhhhsasak appgkngtan qknslieqdk le
//
LOCUS       XP_061013436            1104 aa            linear   MAM 02-DEC-2023
DEFINITION  tau-tubulin kinase 2 isoform X5 [Dama dama].
ACCESSION   XP_061013436
VERSION     XP_061013436.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157453.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1104
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1104
                     /product="tau-tubulin kinase 2 isoform X5"
                     /calculated_mol_wt=121721
     Region          <1..133
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..1104
                     /gene="TTBK2"
                     /coded_by="XM_061157453.1:468..3782"
                     /db_xref="GeneID:133066407"
ORIGIN      
        1 mgrfpstcrk cymldfglar qftnscgdvr ppravagfrg tvryasvnah rnremgrhdd
       61 lwslfymlve fvvgqlpwrk ikdkeqvgsi keryehrlml khlppefsif lehiasldyf
      121 tkpdyqllts vfdnsikafg viesdpfdwe ktgtdgsltt ttasttpqlh trltpaaigi
      181 anatpipgdm lrentdevfp deqlsdgeng ipvgvlpdkl pgslghphpq ekdvweemdt
      241 nrnkiklgic kaateeensh gqangilnap slgspirvrs eitqpdrdvp lvrklrsihs
      301 felekrlale pkpdtdkfle tclekmqkdp sagkestlpa llhkpcvpav sradhiwhyd
      361 eeylpdaskp asantpeqad gggsngfvav nlssckqevd skewvivdke qdlqdfrtne
      421 alghkttgsp sdeepevlqv leespqdekl qlgpwaendh lkketsgvvf vlsgecpata
      481 aseqytdrle lqagaasqfi tvtptspmea qaegpltait iprpsvastq stsgsfhygq
      541 qpekkdlhti eptvelyspr enfsglvvie geppsggsrt dlglqidhig hdmlpnirey
      601 drsqdlgpkd lpdhnrlavr efeglprele eksilvgsdn eeeklskgqh yieisplpgd
      661 lvtmerdhsa tsepldvtkt qtfsvvpnqd knheimklla vgpsevsprv idpyveeqig
      721 qvaamqkski skeddlrged lpnhsgdlst flhqegkrek iaprngelfn pvsenehcpp
      781 srkdvvrssf vtrhsripvl aqeidstfds sspvsakekl lqkkacqpdl vkllvekrql
      841 rsllgdlssa sdklleerla tvpapfseee vftpfsrlaa eshlsrsaed sflapiisqs
      901 rkskiprpvs wvntdqvnss tpsqflprpp pgkppmrpgv earlrrykvl gssnsdsdlf
      961 srlaqilqng sqkprsttqc kspgtphnpk tppkspvvpr rspsasprss slprtssssp
     1021 sragrphhdq rsssphlgrs ksppshsgss ssrrscqqeh ckpsknglkg sgsfhhhsas
     1081 akappgkngt anqknslieq dkle
//
LOCUS       XP_061013437            1231 aa            linear   MAM 02-DEC-2023
DEFINITION  codanin-1 isoform X1 [Dama dama].
ACCESSION   XP_061013437
VERSION     XP_061013437.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157454.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1231
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1231
                     /product="codanin-1 isoform X1"
                     /calculated_mol_wt=134672
     Region          788..903
                     /region_name="Codanin-1_C"
                     /note="Codanin-1 C-terminus; pfam15296"
                     /db_xref="CDD:464622"
     CDS             1..1231
                     /gene="CDAN1"
                     /coded_by="XM_061157454.1:19..3714"
                     /db_xref="GeneID:133066408"
ORIGIN      
        1 maavlesllr eelsvaaavr wiarsaqsse ddpgeaaals slrplrkefv pfllnflreq
       61 ssrvlpqgpp tpakapgsst alpgrsggpp rggrgarnql fppieapsat aadapsarrg
      121 grrrgpgpar erggrgpggl eegvsgeclp waggrrprss gspsspslar sdppnlsnle
      181 efppvgsvpp gsagtkpsrr inptpvseer slskpktcft sppiscvpss qpsvldtssw
      241 ghglpsgcrs lqeeremlrk erskqlqqsp tpacptlesg sphpsrtghl taepadparv
      301 ssrqrlelva lvyssciaen lvpnlflelf fvlqlltarr mvaakhsdle ptpgavdsle
      361 splfqsvhdc vffavqvleh qfhvlshldk gtlklltene rllcfspalq grlraayegs
      421 vakvslampp saqavsfqpe tdnranfssd rafhtfkkqr dvfyevlrew edrheepgwd
      481 fekglgsrir ammgqlsaac shshfvrlfq kqllqmcqsp ggaggtvlge apdvlnmlga
      541 dklgrlrrlq erlvapqssg gpcppptfpg cqgffrdfil sassfqfnqh lmdslslkir
      601 elnslalpqp epsdedgesd vdwqgerrqf amvllslrll akflgfvafl pyrgpepppt
      661 relqdsilsl rsqvppvldv rallqqglrt rravltvpwl veflsladhi vpmldyyrsv
      721 ftlllhlhrs lvlskesege mcflnkllll avlgwlfqip tvpedlffle egqldvfevd
      781 tvasehglds mpvvdqhlly tccpyigelr kllaswvsgs sgrsggfvrk itpttttglg
      841 aqppqttqgl qaqlaqaffh nqppslrrtv efvaerigsn cvkhikatlv aelvrqaesl
      901 lqeqlvtqgq eggdpaqlle ilcsqlcphg aealtqgref cqkkspgavr allpeetpaa
      961 vlssaeniav glatekacaw lsanitalir revkaavsrt lraqgpepaa rgerrgcsra
     1021 cehhaplpsh liseikdvls lavgprdpee gvapeyleql lgqlgqmlrc rqflcppaeq
     1081 hlakcsvela sllvadqipi lgppaqhqle rgqarrlllm llslwkddfq vpvplqlllr
     1141 prnvglladt rprewdlllf llrelvekgl mrrmeieacl gslhetqwpg dfseelatlf
     1201 nlflaephvp epqlracelv qpnrgtvlaq s
//
LOCUS       XP_061013438            1007 aa            linear   MAM 02-DEC-2023
DEFINITION  codanin-1 isoform X2 [Dama dama].
ACCESSION   XP_061013438
VERSION     XP_061013438.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157455.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1007
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1007
                     /product="codanin-1 isoform X2"
                     /calculated_mol_wt=109645
     Region          788..903
                     /region_name="Codanin-1_C"
                     /note="Codanin-1 C-terminus; pfam15296"
                     /db_xref="CDD:464622"
     CDS             1..1007
                     /gene="CDAN1"
                     /coded_by="XM_061157455.1:19..3042"
                     /db_xref="GeneID:133066408"
ORIGIN      
        1 maavlesllr eelsvaaavr wiarsaqsse ddpgeaaals slrplrkefv pfllnflreq
       61 ssrvlpqgpp tpakapgsst alpgrsggpp rggrgarnql fppieapsat aadapsarrg
      121 grrrgpgpar erggrgpggl eegvsgeclp waggrrprss gspsspslar sdppnlsnle
      181 efppvgsvpp gsagtkpsrr inptpvseer slskpktcft sppiscvpss qpsvldtssw
      241 ghglpsgcrs lqeeremlrk erskqlqqsp tpacptlesg sphpsrtghl taepadparv
      301 ssrqrlelva lvyssciaen lvpnlflelf fvlqlltarr mvaakhsdle ptpgavdsle
      361 splfqsvhdc vffavqvleh qfhvlshldk gtlklltene rllcfspalq grlraayegs
      421 vakvslampp saqavsfqpe tdnranfssd rafhtfkkqr dvfyevlrew edrheepgwd
      481 fekglgsrir ammgqlsaac shshfvrlfq kqllqmcqsp ggaggtvlge apdvlnmlga
      541 dklgrlrrlq erlvapqssg gpcppptfpg cqgffrdfil sassfqfnqh lmdslslkir
      601 elnslalpqp epsdedgesd vdwqgerrqf amvllslrll akflgfvafl pyrgpepppt
      661 relqdsilsl rsqvppvldv rallqqglrt rravltvpwl veflsladhi vpmldyyrsv
      721 ftlllhlhrs lvlskesege mcflnkllll avlgwlfqip tvpedlffle egqldvfevd
      781 tvasehglds mpvvdqhlly tccpyigelr kllaswvsgs sgrsggfvrk itpttttglg
      841 aqppqttqgl qaqlaqaffh nqppslrrtv efvaerigsn cvkhikatlv aelvrqaesl
      901 lqeqlvtqgq eggdpaqlle ilcsqlcphg aealtqgref cqkkspgavr allpeetpaa
      961 vrseqcrehc cgpcnreslc mvvsqhhstd qkggesgres hasspgs
//
LOCUS       XP_061013440            4465 aa            linear   MAM 02-DEC-2023
DEFINITION  stAR-related lipid transfer protein 9 [Dama dama].
ACCESSION   XP_061013440
VERSION     XP_061013440.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157457.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4465
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..4465
                     /product="stAR-related lipid transfer protein 9"
                     /calculated_mol_wt=480745
     Region          2..391
                     /region_name="KISc_KIF1A_KIF1B"
                     /note="Kinesin motor domain, KIF1_like proteins; cd01365"
                     /db_xref="CDD:276816"
     Site            order(11,103,106,108..111,253)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276816"
     Site            order(337,340,343)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276816"
     Region          390..504
                     /region_name="Kinesin_assoc"
                     /note="Kinesin-associated; pfam16183"
                     /db_xref="CDD:465047"
     Region          474..592
                     /region_name="FHA_KIF16A_STARD9"
                     /note="forkhead associated (FHA) domain found in
                     StAR-related lipid transfer protein 9 (StARD9); cd22731"
                     /db_xref="CDD:438783"
     Region          <2198..2583
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          <3592..3960
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          4255..4465
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     Site            order(4301,4303,4305,4314..4316,4318..4319,4334,4346,4348,
                     4350,4352,4366,4368,4370,4385,4387,4409..4410,4412,4414,
                     4427,4429,4431,4433,4440..4444,4448..4449,4452..4454,4457)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176854"
     CDS             1..4465
                     /gene="STARD9"
                     /coded_by="XM_061157457.1:47..13444"
                     /db_xref="GeneID:133066409"
ORIGIN      
        1 mahvrvavrv rplskreike ggkiivevng kvakirnlkv dgrpngfgds rekvvafgfd
       61 ycywsvnped pqyasqdvvf qdlgtevlsg aakgyniclf aygqtgsgkt ytmlgtpasv
      121 gltpricegl fireencapl pascsikvsf leiynervrd llkqsdqkkt ynlrvrehpe
      181 mgpyvqglsq hvvtnykqvi qlleegianr itaathvhea ssrshaifti yytqaflenn
      241 lpseisskin lvdlagsera dpsyckdrit eganinkslv tlgivistla qnsqvfnscq
      301 sltsaasgdg dsglpssasg tssgggpswr qsyipyrdsv ltwllkdslg gnsrtimvat
      361 vspahtsyse tmstlryasn akniinkprv nedanvklir elreeigrlk amllsfelrs
      421 fhslnegkde nlkelilqne sktdqlskdw arkwnewqal vehyrvdinr rraglvidss
      481 lphlmaledd vlstgvvlyh lkegttkigr idseqeqdiv lqgqwierdh ctitsacgvv
      541 ilrpargarc tvngrevtss crltqgavit lgkaqkfrfn hpaeaailrq rrqvgeavgg
      601 sgslewldlg gdvtasqmcl cpllwkerra lgeqndkdhw plragetpyg tqipqqqqrl
      661 vgdvrqqilv gqirakqeae qeqlhaglrv eddqqwllrg etwlassrqq pqqdhaaeke
      721 leaaapshsw cqtdpktqps pqvqsqsrvv hpqflrrher siwrkrasfk leriikkqrl
      781 leahrgpeql ralcwlqddr prrtafpalr pgalvpgphr rsrltscssl rfrrpcswhs
      841 aqlhsvfvnr dpsttlppva dppeqfseey lplaasyppr ighliqhalc ssgeghfgta
      901 rkaltwkgas plgtcltess esasvqever malpapvele epqgkernlp epdnsesdds
      961 qisedslaek gpgnprenpg hsyltsgcgh gqaraqasgr gfttssdsrp ftlahrsisl
     1021 dslidaeeep gdhwqgkpsf astdemptet fwhlqspilp aggqeavcrl gpishkrapr
     1081 ldailsvsss fylepqpqpp ceqpevaveq sptepattlq dvqpsrgspl vsmdswfscd
     1141 skinpsspph slcpspdiqe vqrcgwerpg cwlnieelks pgaettlpfs ttlppastel
     1201 pcsissvytd pvsgsvslwd pcslpqpgae gtsqasgvpd taqqgvseas nssvssllaa
     1261 sassftyvgs acerdwaalq qkyllelshp vleatgaprp vfpslredsg ppvqasgrgg
     1321 dgvlpvgpga ssspdfnnvp thlskirrlr aekeqdslnv kiegtsdfft tsekevshsg
     1381 tysadveslt sgptnaqvsa aenkmaypmt aargvkkssl eessqssekp glmtssdecf
     1441 ilknpchhiv tiatkdphwp rgwaplrkkr agpvrrlgln shrppqeekt dsqessmeag
     1501 rrhskpscsf psgpelylhs apwnplpssl qpppletfyv tksrdaltet aleipacrea
     1561 rvpspplrea wgfghehqvl qnvyvedklp vqlqnqnsqi assqqvtaer pvdlnakevc
     1621 rekgkclgkv kershnsvyf fvtqnghffp stsikvcefe nqvgilnkqs lptlkqgaka
     1681 piqsycsvss nrsgsgkpll gcesetgeee eqgqnavltq aqafdmkrhf ptrvrsdftc
     1741 ktiylapdkd kpqdaalplk srsvrhqvss petmalgesp ahkeegrnet gllgkaphsk
     1801 dgseefklsq testyeqfqs vtcsqernls eckvpgkalk anpkeeppgk twdervnsan
     1861 emarlirsvm qlengiseie skqgkqlhas hppgvskefi fqyqqdqeta dsvlrtgsfr
     1921 nhppfknqlt spkwtddvic rdgeagevev ngstdpqgpg srfvrghtyp avlntpakds
     1981 ggylgvctvc rectnasahp rmkssaralp lqprpegtse egklvnavhl rrqprslgsl
     2041 eeletlegvq eshpakcihr fqqeepavqg rveemaaqkg sleekntvla tqrlpgqchh
     2101 cvhtlfghrt slspsqpdsc maprqdlsht lllnstrlpr sylyapdtlg issvdyvldp
     2161 tvlkmptspl vtgagqqdqs gasghhslqg ddrwdssvlh sawpgsvtpt atgprgqssv
     2221 pgsvplaaeg krsastgpqd qggdlrsssm rldsrvgsps raeaaeprgp dragalngas
     2281 sllerkvgsp leegdnqgre vrqeaedlsp aggafsvpvs ppgvpqpeps aqpptslavl
     2341 eemglaktqr kqlydvvagg tvlpssktll epecssraps rlqcpqmgqs vadrttneae
     2401 awnhmaslsv epghrsvdkr ttvhqaipps adsfnslpst dtdvgpqcps qtsphtepap
     2461 ggshctrkqe cflgageqsv chtssseite knkatgaaps agalgsgnla ssaasreedr
     2521 rvmtgevvaa slsqapfeda griaqgreal avaegmlpgh qesspahqep atpdstwggg
     2581 sgtvqaiaqg ekaacfesrh vtsdvqnsas lsepnqdqgq cleastssee granptwgav
     2641 lpralrgvgp eapsqprvkr egsigsglae acragvegpr pallpdqspg gvreeapsrc
     2701 predsgvgvs swspggsktl glsqsqeesr sgpcwqphsp qpvvwgarss psstslcyrd
     2761 gdlgrgasta plhphhpsrv psrawgmerg egrggepgvl lahglepkgi kvelepadgs
     2821 tpeasaaavl pltggcsspa apdmrtspls plltdgssrs vgdsekkaae kkvraeleal
     2881 pspegrcset pgklqdssvg gqgaqgsqpk paaaggphtl nlsegcvese lpeglqqgcl
     2941 gndirclpee pqlppgardh gglhpqakli telkyvsrsq vdspweeeeq qrdqaasgrg
     3001 dpvgvrrpca degssdscqi rgadregrtv arspvsktis psfgdsaavs lgqrrarwpa
     3061 aqgpgqpssg geqlaphhrg slpiiavlsg rkysrpqfsv vsssrslqel nlsveppspt
     3121 eediaepnql washprgtss gksavrtsln aegcdqeafs nldsiatdlr plplapppys
     3181 atstfsrmpi pnltsvhpsg aleqaqsgks erlggqarpe ewhstdvggg alllgpsdin
     3241 pcilpwhpkg partgwrqhv fggagsishc ptsqdltppn vaqssmdscl edqssllhsh
     3301 lstlasaqsm lnkcssvgna rgsreawevw gslpalrnpn ilissegaap skgpderaqf
     3361 rgtpdevgsl rrepswaegs aavpvdeiml lypsevggpv aqsrtdtler gtqtlgcesh
     3421 wsssdssars dlaswasmhs lslhlsqllh stsellgsls qpsvaekewn akrdtprevp
     3481 qtqvtdgstq ttvdegiqtd laspslhlqa peaepqkvnv ileglgsdla smsqgkghvp
     3541 gtlqkreaee tvwktagpld lqgedtlcrp qstpvpsfhf nfqkgpfgqn lpslspqasp
     3601 dallppssqp eepsclavgr pclsalsspg pcphtvesag elrvqkeqgs tsallvdras
     3661 spiltlsast pgsgippgal svpspsdlsl dsrqklvssp slplpaprpp vgnssqttde
     3721 aggsqragap cgegrarrpf gvssqgspqq stklqvrfvq qppqqclpgt tagvqsrlsp
     3781 palrsrsqrl tdsflpedva sveggslsrr gpggwqsrte krgegsaspv elrpaldiss
     3841 slgdlqrhsp cpfseltdtp glqgcilgpp vacqpgglls pgsqmytape pqhhglrdlp
     3901 vhnkfsdwcg pqngspggpg tvnslgtrgd cgfgeqpqrr pqapedqswa pewpqreqip
     3961 lkvgaqnlsl stelteaklh hgfgetdall qvlksgtgea laaekeelya rpkhtaetlq
     4021 reqaeglqns rltrslspek qlsfardfdl psrrreylqq lrkdvvettr spgsasrssh
     4081 ppsdielmlq eyqrareeak veiarardrl werteqeklr irqqiisqll reeeklhnla
     4141 tsgsrctssd gslssggtsg ynsspalpsq lqspdsvgnt nlpdsrdswv gevrgrssvr
     4201 nnqlnlassa wkslaygrsa algscccsps slsslgtsfs ssykdlakhi vdlsmadvma
     4261 acshnlnnlf scraaagwnh qgeeqevqly ykmfsstrhg flgagvvsqp lshvwaavsd
     4321 ptlwplyhkp iqtarlhqrv tnsinlvylv cnttvcalkq prdfccvcve arevpallvg
     4381 qlsimaaqsv ydasmprpsr emvrgeilps awilqpltve gkeitrviyl aqvelgapgf
     4441 ppqllssfik qqplviarla sflgs
//
LOCUS       XP_061013441            1902 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 106 isoform X1 [Dama dama].
ACCESSION   XP_061013441
VERSION     XP_061013441.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157458.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1902
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1902
                     /product="zinc finger protein 106 isoform X1"
                     /calculated_mol_wt=211005
     Region          7..29
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Site            order(14..16,18..19,23,28,50,53..57,59..60)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275371"
     Region          45..67
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          <158..>297
                     /region_name="dermokine"
                     /note="cl42387"
                     /db_xref="CDD:455732"
     Region          1544..1821
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(1549,1565,1569,1575..1576,1588..1589,1610,1614,
                     1620..1621,1633,1648,1653,1659..1660,1673,1693,1698,
                     1704..1705,1717..1718,1734,1738,1744..1745,1757..1758,
                     1773,1778,1784..1785,1797..1798,1814,1818)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          1594..1633
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1637..1671
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1679..1716
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1722..1756
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1764..1796
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1802..1822
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..1902
                     /gene="ZNF106"
                     /coded_by="XM_061157458.1:168..5876"
                     /db_xref="GeneID:133066410"
ORIGIN      
        1 mvrerkcilc hivysskkem dehmrsmlhh relenlkgrd sshecrvcgv tevglsayak
       61 hisgqlhkdn vdaqereddg keeeeedyfd kelvqlikqr keqsrqdeps nssqeinsdd
      121 rrpqwrredr ipyqdresys qparhhrgpp qrdrkwekdg ysntrknsft hssrnnggsr
      181 gcsgwhkgsa ggsspwfhnh snsgggwhsn ngtvdwnhtg tgrnsswhse gtggfpswht
      241 sssngnwkss argtnswnys gpgdkfqpgr nrssncqmed mnmlwntksk snkynqdryk
      301 wqrqendkvg avatyrgpse gfasgkfhse glldfnfeql esqttkqtdt ftskiggksv
      361 svareklrrw tpypsqktld lqsgmkevtg nksemidkpl fdfslitvgi kepqndktnn
      421 srklktkkek ytgslkhkts sdctasyevv recpitgkpe qepnlnktpl lkspllptpg
      481 tksvpqkqds knpsqntkin sffpgehsnp ltkptvednq ssciskmrsp gphvlkgsnk
      541 splgtqrdpd envsdtlqka kdvlqchesl qnplsaskrt rnyakasrnv eesekgslki
      601 efqvhalede sdgersdtek hgtkietlgs tttevlscst paadekrgdd qnletsrkps
      661 tspcnstvhq ketelqmtsv aspqsgllld lktsledaqv dnpvkshesy etegfestsl
      721 daelqksdig qpsgpllpel sklgfpaslq rdltrhislk sktgahlpep nlnsarrirn
      781 isghrksete kesglkptlr qilnasrrnv nweqviqqvt kkkqelgkgl prfgiemvpl
      841 vqneqevldl dgepdlsdle gfqwegvsis sspglarkrs lsessvimdr apsvysffse
      901 egtgkenepq qifspnnsfr saqsqkpnms lkqevtplaa slrtdegten vatrrrhsaq
      961 lspdrtiplm hltkelhsqe sslllsenhn aqesngegns lssnassala nssladaatd
     1021 ssctsgaeqn dgqnvrkkrr atgdgsspel pslerknkrr kikgkkersq vdqllsislr
     1081 eeelskslqc mdnnllqara alqtayvevq rllvlkqqit memsalrthr iqilqglqet
     1141 yepserpdqv psnltreqkn vrsqtstdgt llpspffpnf leplsshvsp sstgtplqai
     1201 tssfqahgsv papdssvqik qepmspeqet vnavsqgsac slskellqan reisdncpvy
     1261 pvttaalsls elterfheps qelkfsveqg itrnrgnsps sqsaglpsid keseepnkgn
     1321 sgseactssf prlsfasetp lekelhspad qpeqqaestl tsaeargnkk kkklrkkktl
     1381 raahvpensd teqdvftakp vrkvktgksa kggkvttssw edgrtgaeqe svrdepdsds
     1441 slevlevpnp qlevvaidss esgeekpdsp skkdiwnste qnsletsrsg cdevsstsei
     1501 gtrykdgipv svaetqtvis sikgsknsse issepgddde ptegsfeghq aavnaiqifg
     1561 nllytcsadk tvraynlvsr kcigvfeght skvncllvtq tsgknaalyt gssdhtircy
     1621 nvktrecveq lqledrvlcl hsrwrilyag langtvvtfn iknnkrleif echgpravsc
     1681 lataqegark llvvgsydct isvrdarngl llrtleghsk tilcmkvvnd lvfsgssdqs
     1741 vhahnihtge lvriykghnh avtvvnilgk vmvtacldkf vrvyelqshd rlqvygghkd
     1801 mimcmtihks miytgcydgs iqavrlnlmq nyrcwwhgcs lifgvvdhlk qhlltdhtnp
     1861 nfqtlkcrwk ncdafftakk gskqdaaghi ehhaeddski ds
//
LOCUS       XP_061013442            1902 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 106 isoform X1 [Dama dama].
ACCESSION   XP_061013442
VERSION     XP_061013442.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157459.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1902
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1902
                     /product="zinc finger protein 106 isoform X1"
                     /calculated_mol_wt=211005
     Region          7..29
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Site            order(14..16,18..19,23,28,50,53..57,59..60)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275371"
     Region          45..67
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          <158..>297
                     /region_name="dermokine"
                     /note="cl42387"
                     /db_xref="CDD:455732"
     Region          1544..1821
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(1549,1565,1569,1575..1576,1588..1589,1610,1614,
                     1620..1621,1633,1648,1653,1659..1660,1673,1693,1698,
                     1704..1705,1717..1718,1734,1738,1744..1745,1757..1758,
                     1773,1778,1784..1785,1797..1798,1814,1818)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          1594..1633
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1637..1671
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1679..1716
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1722..1756
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1764..1796
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1802..1822
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..1902
                     /gene="ZNF106"
                     /coded_by="XM_061157459.1:247..5955"
                     /db_xref="GeneID:133066410"
ORIGIN      
        1 mvrerkcilc hivysskkem dehmrsmlhh relenlkgrd sshecrvcgv tevglsayak
       61 hisgqlhkdn vdaqereddg keeeeedyfd kelvqlikqr keqsrqdeps nssqeinsdd
      121 rrpqwrredr ipyqdresys qparhhrgpp qrdrkwekdg ysntrknsft hssrnnggsr
      181 gcsgwhkgsa ggsspwfhnh snsgggwhsn ngtvdwnhtg tgrnsswhse gtggfpswht
      241 sssngnwkss argtnswnys gpgdkfqpgr nrssncqmed mnmlwntksk snkynqdryk
      301 wqrqendkvg avatyrgpse gfasgkfhse glldfnfeql esqttkqtdt ftskiggksv
      361 svareklrrw tpypsqktld lqsgmkevtg nksemidkpl fdfslitvgi kepqndktnn
      421 srklktkkek ytgslkhkts sdctasyevv recpitgkpe qepnlnktpl lkspllptpg
      481 tksvpqkqds knpsqntkin sffpgehsnp ltkptvednq ssciskmrsp gphvlkgsnk
      541 splgtqrdpd envsdtlqka kdvlqchesl qnplsaskrt rnyakasrnv eesekgslki
      601 efqvhalede sdgersdtek hgtkietlgs tttevlscst paadekrgdd qnletsrkps
      661 tspcnstvhq ketelqmtsv aspqsgllld lktsledaqv dnpvkshesy etegfestsl
      721 daelqksdig qpsgpllpel sklgfpaslq rdltrhislk sktgahlpep nlnsarrirn
      781 isghrksete kesglkptlr qilnasrrnv nweqviqqvt kkkqelgkgl prfgiemvpl
      841 vqneqevldl dgepdlsdle gfqwegvsis sspglarkrs lsessvimdr apsvysffse
      901 egtgkenepq qifspnnsfr saqsqkpnms lkqevtplaa slrtdegten vatrrrhsaq
      961 lspdrtiplm hltkelhsqe sslllsenhn aqesngegns lssnassala nssladaatd
     1021 ssctsgaeqn dgqnvrkkrr atgdgsspel pslerknkrr kikgkkersq vdqllsislr
     1081 eeelskslqc mdnnllqara alqtayvevq rllvlkqqit memsalrthr iqilqglqet
     1141 yepserpdqv psnltreqkn vrsqtstdgt llpspffpnf leplsshvsp sstgtplqai
     1201 tssfqahgsv papdssvqik qepmspeqet vnavsqgsac slskellqan reisdncpvy
     1261 pvttaalsls elterfheps qelkfsveqg itrnrgnsps sqsaglpsid keseepnkgn
     1321 sgseactssf prlsfasetp lekelhspad qpeqqaestl tsaeargnkk kkklrkkktl
     1381 raahvpensd teqdvftakp vrkvktgksa kggkvttssw edgrtgaeqe svrdepdsds
     1441 slevlevpnp qlevvaidss esgeekpdsp skkdiwnste qnsletsrsg cdevsstsei
     1501 gtrykdgipv svaetqtvis sikgsknsse issepgddde ptegsfeghq aavnaiqifg
     1561 nllytcsadk tvraynlvsr kcigvfeght skvncllvtq tsgknaalyt gssdhtircy
     1621 nvktrecveq lqledrvlcl hsrwrilyag langtvvtfn iknnkrleif echgpravsc
     1681 lataqegark llvvgsydct isvrdarngl llrtleghsk tilcmkvvnd lvfsgssdqs
     1741 vhahnihtge lvriykghnh avtvvnilgk vmvtacldkf vrvyelqshd rlqvygghkd
     1801 mimcmtihks miytgcydgs iqavrlnlmq nyrcwwhgcs lifgvvdhlk qhlltdhtnp
     1861 nfqtlkcrwk ncdafftakk gskqdaaghi ehhaeddski ds
//
LOCUS       XP_061013443            1109 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 106 isoform X2 [Dama dama].
ACCESSION   XP_061013443
VERSION     XP_061013443.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157460.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1109
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1109
                     /product="zinc finger protein 106 isoform X2"
                     /calculated_mol_wt=122246
     Region          751..1028
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(756,772,776,782..783,795..796,817,821,827..828,840,
                     855,860,866..867,880,900,905,911..912,924..925,941,945,
                     951..952,964..965,980,985,991..992,1004..1005,1021,1025)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          801..840
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          844..878
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          886..923
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          929..963
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          971..1003
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1009..1029
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..1109
                     /gene="ZNF106"
                     /coded_by="XM_061157460.1:106..3435"
                     /db_xref="GeneID:133066410"
ORIGIN      
        1 mvrerkcilc hivysskkem dehmrsmlhh relenlkgrf giemvplvqn eqevldldge
       61 pdlsdlegfq wegvsisssp glarkrslse ssvimdraps vysffseegt gkenepqqif
      121 spnnsfrsaq sqkpnmslkq evtplaaslr tdegtenvat rrrhsaqlsp drtiplmhlt
      181 kelhsqessl llsenhnaqe sngegnslss nassalanss ladaatdssc tsgaeqndgq
      241 nvrkkrratg dgsspelpsl erknkrrkik gkkersqvdq llsislreee lskslqcmdn
      301 nllqaraalq tayvevqrll vlkqqitmem salrthriqi lqglqetyep serpdqvpsn
      361 ltreqknvrs qtstdgtllp spffpnflep lsshvspsst gtplqaitss fqahgsvpap
      421 dssvqikqep mspeqetvna vsqgsacsls kellqanrei sdncpvypvt taalslselt
      481 erfhepsqel kfsveqgitr nrgnspssqs aglpsidkes eepnkgnsgs eactssfprl
      541 sfasetplek elhspadqpe qqaestltsa eargnkkkkk lrkkktlraa hvpensdteq
      601 dvftakpvrk vktgksakgg kvttsswedg rtgaeqesvr depdsdssle vlevpnpqle
      661 vvaidssesg eekpdspskk diwnsteqns letsrsgcde vsstseigtr ykdgipvsva
      721 etqtvissik gsknsseiss epgdddepte gsfeghqaav naiqifgnll ytcsadktvr
      781 aynlvsrkci gvfeghtskv ncllvtqtsg knaalytgss dhtircynvk trecveqlql
      841 edrvlclhsr wrilyaglan gtvvtfnikn nkrleifech gpravsclat aqegarkllv
      901 vgsydctisv rdarnglllr tleghsktil cmkvvndlvf sgssdqsvha hnihtgelvr
      961 iykghnhavt vvnilgkvmv tacldkfvrv yelqshdrlq vygghkdmim cmtihksmiy
     1021 tgcydgsiqa vrlnlmqnyr cwwhgcslif gvvdhlkqhl ltdhtnpnfq tlkcrwkncd
     1081 afftakkgsk qdaaghiehh aeddskids
//
LOCUS       XP_061013444             762 aa            linear   MAM 02-DEC-2023
DEFINITION  calpain-3 isoform X1 [Dama dama].
ACCESSION   XP_061013444
VERSION     XP_061013444.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157461.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..762
                     /product="calpain-3 isoform X1"
                     /calculated_mol_wt=87555
     Region          75..367
                     /region_name="Peptidase_C2"
                     /note="Calpain family cysteine protease; pfam00648"
                     /db_xref="CDD:459889"
     Region          387..526
                     /region_name="Calpain_III"
                     /note="Calpain large subunit, domain III; pfam01067"
                     /db_xref="CDD:460050"
     Site            order(417..419,430)
                     /site_type="other"
                     /note="acidic loop"
                     /db_xref="CDD:238132"
     Region          561..762
                     /region_name="EFh_PEF_CAPN3"
                     /note="Calcium-activated neutral; cd16190"
                     /db_xref="CDD:320065"
     Region          561..589
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320065"
     Site            order(573,580,646,648,650,657,676,678,680,741,743,745)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320065"
     Region          637..666
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320065"
     Site            order(643,649,702..703,706,729..730,733..734,737,746..753,
                     755..762)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:320065"
     Region          667..697
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320065"
     Region          702..731
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320065"
     Region          732..762
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320065"
     CDS             1..762
                     /gene="CAPN3"
                     /coded_by="XM_061157461.1:431..2719"
                     /db_xref="GeneID:133066411"
ORIGIN      
        1 mptvisasva prtgaeprsp gpiaqaaqgk gteagggnps giysaiisrn fpiigvkekt
       61 feqlhrkcle kkvlfvdpef ppdetslfys qkfpiqfiwk rppeicenpr fiigganrtd
      121 icqgdlgdcw flaaiacltl nkrllfrvip hdqsftenya gifhfqfwry gdwvdvvidd
      181 clptynnqlv ftksnhrnef wsallekaya klhgsyealk ggntteamed ftggvteffe
      241 ikdaprdmyk imkkaiergs lmgcsidtiv pvqyetrmac glvkghaysv tgleealykg
      301 ekvklvrlrn pwgqvewngs wsdswkdwsy vdkdekarlq hqvtedgefw msyddfiyhf
      361 tkleicnlta dalesdklqt wtvsvnegrw vrgcsaggcr nfpdtfwtnp qyrlklleed
      421 ddpddsevic sflvalmqkn rrkdrklgan lftigfaiye vpkemhgnkq hlqkdfflyn
      481 askarsrtyi nmrevserfr lppseyvivp styephqege filrvfsekr nlseeventi
      541 svdrpvpeps ntdqeseeqr qfrnifrqia gddmeicade lknvlnrvvn kreqlnsaga
      601 ggqwgwlcvs iylkaaphss pylsdkdlkt qgftlescrs mialmdtdgs grlnlqefhh
      661 lwkkiktwqk ifkhydtdqs gtinsyemrn avndagfhln nqlydiitmr yadkhmnidf
      721 dsficcfvrl egmfrafnaf dkdgdgiikl nvlewlqltm ya
//
LOCUS       XP_061013445             729 aa            linear   MAM 02-DEC-2023
DEFINITION  calpain-3 isoform X2 [Dama dama].
ACCESSION   XP_061013445
VERSION     XP_061013445.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157462.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..729
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..729
                     /product="calpain-3 isoform X2"
                     /calculated_mol_wt=84047
     Region          75..367
                     /region_name="Peptidase_C2"
                     /note="Calpain family cysteine protease; pfam00648"
                     /db_xref="CDD:459889"
     Region          387..526
                     /region_name="Calpain_III"
                     /note="Calpain large subunit, domain III; pfam01067"
                     /db_xref="CDD:460050"
     Site            order(417..419,430)
                     /site_type="other"
                     /note="acidic loop"
                     /db_xref="CDD:238132"
     Region          561..729
                     /region_name="EFh_PEF_CAPN3"
                     /note="Calcium-activated neutral; cd16190"
                     /db_xref="CDD:320065"
     Region          561..589
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320065"
     Site            order(573,580,613,615,617,624,643,645,647,708,710,712)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320065"
     Region          604..633
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320065"
     Site            order(610,616,669..670,673,696..697,700..701,704,713..720,
                     722..729)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:320065"
     Region          634..664
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320065"
     Region          669..698
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320065"
     Region          699..729
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320065"
     CDS             1..729
                     /gene="CAPN3"
                     /coded_by="XM_061157462.1:429..2618"
                     /db_xref="GeneID:133066411"
ORIGIN      
        1 mptvisasva prtgaeprsp gpiaqaaqgk gteagggnps giysaiisrn fpiigvkekt
       61 feqlhrkcle kkvlfvdpef ppdetslfys qkfpiqfiwk rppeicenpr fiigganrtd
      121 icqgdlgdcw flaaiacltl nkrllfrvip hdqsftenya gifhfqfwry gdwvdvvidd
      181 clptynnqlv ftksnhrnef wsallekaya klhgsyealk ggntteamed ftggvteffe
      241 ikdaprdmyk imkkaiergs lmgcsidtiv pvqyetrmac glvkghaysv tgleealykg
      301 ekvklvrlrn pwgqvewngs wsdswkdwsy vdkdekarlq hqvtedgefw msyddfiyhf
      361 tkleicnlta dalesdklqt wtvsvnegrw vrgcsaggcr nfpdtfwtnp qyrlklleed
      421 ddpddsevic sflvalmqkn rrkdrklgan lftigfaiye vpkemhgnkq hlqkdfflyn
      481 askarsrtyi nmrevserfr lppseyvivp styephqege filrvfsekr nlseeventi
      541 svdrpvpeps ntdqeseeqr qfrnifrqia gddmeicade lknvlnrvvn khkdlktqgf
      601 tlescrsmia lmdtdgsgrl nlqefhhlwk kiktwqkifk hydtdqsgti nsyemrnavn
      661 dagfhlnnql ydiitmryad khmnidfdsf iccfvrlegm frafnafdkd gdgiiklnvl
      721 ewlqltmya
//
LOCUS       XP_061013446             265 aa            linear   MAM 02-DEC-2023
DEFINITION  calpain-3 isoform X3 [Dama dama].
ACCESSION   XP_061013446
VERSION     XP_061013446.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157463.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..265
                     /product="calpain-3 isoform X3"
                     /calculated_mol_wt=31140
     Region          <7..72
                     /region_name="Calpain_III"
                     /note="Calpain, subdomain III. Calpains are
                     calcium-activated cytoplasmic cysteine proteinases,
                     participate in cytoskeletal remodeling processes, cell
                     differentiation, apoptosis and signal transduction.
                     Catalytic domain and the two calmodulin-like domains
                     are...; cl00165"
                     /db_xref="CDD:469636"
     Region          97..265
                     /region_name="EFh_PEF_CAPN3"
                     /note="Calcium-activated neutral; cd16190"
                     /db_xref="CDD:320065"
     Region          97..125
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320065"
     Site            order(109,116,149,151,153,160,179,181,183,244,246,248)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320065"
     Region          140..169
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320065"
     Site            order(146,152,205..206,209,232..233,236..237,240,249..256,
                     258..265)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:320065"
     Region          170..200
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320065"
     Region          205..234
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320065"
     Region          235..265
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320065"
     CDS             1..265
                     /gene="CAPN3"
                     /coded_by="XM_061157463.1:397..1194"
                     /db_xref="GeneID:133066411"
ORIGIN      
        1 mhgnkqhlqk dfflynaska rsrtyinmre vserfrlpps eyvivpstye phqegefilr
       61 vfsekrnlse eventisvdr pvpepsntdq eseeqrqfrn ifrqiagddm eicadelknv
      121 lnrvvnkhkd lktqgftles crsmialmdt dgsgrlnlqe fhhlwkkikt wqkifkhydt
      181 dqsgtinsye mrnavndagf hlnnqlydii tmryadkhmn idfdsficcf vrlegmfraf
      241 nafdkdgdgi iklnvlewlq ltmya
//
LOCUS       XP_061013447             822 aa            linear   MAM 02-DEC-2023
DEFINITION  calpain-3 isoform X4 [Dama dama].
ACCESSION   XP_061013447
VERSION     XP_061013447.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157464.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..822
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..822
                     /product="calpain-3 isoform X4"
                     /calculated_mol_wt=94400
     Region          75..416
                     /region_name="Peptidase_C2"
                     /note="Calpain family cysteine protease; pfam00648"
                     /db_xref="CDD:459889"
     Region          436..575
                     /region_name="Calpain_III"
                     /note="Calpain large subunit, domain III; pfam01067"
                     /db_xref="CDD:460050"
     Site            order(466..468,479)
                     /site_type="other"
                     /note="acidic loop"
                     /db_xref="CDD:238132"
     Region          584..654
                     /region_name="Calpain_u2"
                     /note="Unstructured region on Calpain-3; pfam16648"
                     /db_xref="CDD:465216"
     Region          654..822
                     /region_name="EFh_PEF_CAPN3"
                     /note="Calcium-activated neutral; cd16190"
                     /db_xref="CDD:320065"
     Region          654..682
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320065"
     Site            order(666,673,706,708,710,717,736,738,740,801,803,805)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320065"
     Region          697..726
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320065"
     Site            order(703,709,762..763,766,789..790,793..794,797,806..813,
                     815..822)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:320065"
     Region          727..757
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320065"
     Region          762..791
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320065"
     Region          792..822
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320065"
     CDS             1..822
                     /gene="CAPN3"
                     /coded_by="XM_061157464.1:435..2903"
                     /db_xref="GeneID:133066411"
ORIGIN      
        1 mptvisasva prtgaeprsp gpiaqaaqgk gteagggnps giysaiisrn fpiigvkekt
       61 feqlhrkcle kkvlfvdpef ppdetslfys qkfpiqfiwk rppeicenpr fiigganrtd
      121 icqgdlgdcw flaaiacltl nkrllfrvip hdqsftenya gifhfqfwry gdwvdvvidd
      181 clptynnqlv ftksnhrnef wsallekaya klhgsyealk ggntteamed ftggvteffe
      241 ikdaprdmyk imkkaiergs lmgcsiddgt nmtygtspsg lkmgelierm vrnmdnsrlr
      301 dsdlipegcs ddrptrtivp vqyetrmacg lvkghaysvt gleealykge kvklvrlrnp
      361 wgqvewngsw sdswkdwsyv dkdekarlqh qvtedgefwm syddfiyhft kleicnltad
      421 alesdklqtw tvsvnegrwv rgcsaggcrn fpdtfwtnpq yrlklleedd dpddsevics
      481 flvalmqknr rkdrklganl ftigfaiyev pkemhgnkqh lqkdfflyna skarsrtyin
      541 mrevserfrl ppseyvivps tyephqegef ilrvfsekrn lseeventis vdrpvkkkkt
      601 kpiifvsdra nsnkelgvdq eteegkdkas pdkeakspqp epsntdqese eqrqfrnifr
      661 qiagddmeic adelknvlnr vvnkhkdlkt qgftlescrs mialmdtdgs grlnlqefhh
      721 lwkkiktwqk ifkhydtdqs gtinsyemrn avndagfhln nqlydiitmr yadkhmnidf
      781 dsficcfvrl egmfrafnaf dkdgdgiikl nvlewlqltm ya
//
LOCUS       XP_061013448             283 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat-containing protein 57 isoform X1 [Dama dama].
ACCESSION   XP_061013448
VERSION     XP_061013448.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157465.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..283
                     /product="leucine-rich repeat-containing protein 57
                     isoform X1"
                     /calculated_mol_wt=31472
     Region          <65..>233
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          84..107
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          108..130
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          131..153
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          154..176
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          177..196
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          197..221
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          222..243
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..283
                     /gene="LRRC57"
                     /coded_by="XM_061157465.1:1..852"
                     /db_xref="GeneID:133066412"
ORIGIN      
        1 mtsqgvsara eawaahpser gsrvfpcpts relsrrrdls lgarmgnsal rahvetaqkt
       61 gvfqlkdrgl tefpselqkl tsnlrtidls nnkienlppv vigkfsllks lslnnnklta
      121 lpdelcnlkk letlslnnnq lrelpstfgq lsalktlsls gnqlralppq lcslrhldvv
      181 dlsknqirsi pdivgelqvi elnlnqnqia qisvkisscp rlkvlrleen clelsmlpqs
      241 ilsdsqicll avegnlfeik klrelegydk ymerftatkk kfa
//
LOCUS       XP_061013450             239 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat-containing protein 57 isoform X2 [Dama dama].
ACCESSION   XP_061013450
VERSION     XP_061013450.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157467.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..239
                     /product="leucine-rich repeat-containing protein 57
                     isoform X2"
                     /calculated_mol_wt=26648
     Region          <21..>189
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          40..63
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          64..86
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          87..109
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          110..132
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          133..154
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          155..177
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          178..199
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..239
                     /gene="LRRC57"
                     /coded_by="XM_061157467.1:229..948"
                     /db_xref="GeneID:133066412"
ORIGIN      
        1 mgnsalrahv etaqktgvfq lkdrgltefp selqkltsnl rtidlsnnki enlppvvigk
       61 fsllkslsln nnkltalpde lcnlkkletl slnnnqlrel pstfgqlsal ktlslsgnql
      121 ralppqlcsl rhldvvdlsk nqirsipdiv gelqvielnl nqnqiaqisv kisscprlkv
      181 lrleenclel smlpqsilsd sqicllaveg nlfeikklre legydkymer ftatkkkfa
//
LOCUS       XP_061013451             235 aa            linear   MAM 02-DEC-2023
DEFINITION  HAUS augmin-like complex subunit 2 [Dama dama].
ACCESSION   XP_061013451
VERSION     XP_061013451.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157468.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..235
                     /product="HAUS augmin-like complex subunit 2"
                     /calculated_mol_wt=26478
     Region          8..190
                     /region_name="HAUS2"
                     /note="HAUS augmin-like complex subunit 2; pfam15003"
                     /db_xref="CDD:373465"
     CDS             1..235
                     /gene="HAUS2"
                     /coded_by="XM_061157468.1:38..745"
                     /db_xref="GeneID:133066413"
ORIGIN      
        1 maaanpwdpa talnaaglll ghfitselvt qemlniskks tscfvnfsrl qqitdiqaei
       61 yqknleiell slekdaadvv hpsflaqkch slqsmnnhle avlkekrslr qrllkpicqg
      121 nlpieavyhr yivhllelav tfierledhl etirnipyld adlkkmstal akmdilvtet
      181 eelaenilkw reqqkevssh ipkilaekns lhkhgvivpp lpltskvnvq tinak
//
LOCUS       XP_061013452             211 aa            linear   MAM 02-DEC-2023
DEFINITION  synaptosomal-associated protein 23 [Dama dama].
ACCESSION   XP_061013452
VERSION     XP_061013452.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157469.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..211
                     /product="synaptosomal-associated protein 23"
                     /calculated_mol_wt=23098
     Region          9..75
                     /region_name="SNARE_SNAP23N"
                     /note="N-terminal SNARE motif of SNAP23; cd15895"
                     /db_xref="CDD:277248"
     Site            order(13,16..21,23..28,30..31,34..35,37..42,44..45,47..49,
                     51..56,58..59,61..63,65..66,68..70,72..73,75)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277248"
     Site            48
                     /site_type="active"
                     /note="zero layer [active]"
                     /db_xref="CDD:277248"
     Region          86..148
                     /region_name="SNAP-25"
                     /note="SNAP-25 family; pfam00835"
                     /db_xref="CDD:459955"
     Region          149..207
                     /region_name="SNARE_SNAP23C"
                     /note="C-terminal SNARE motif of SNAP23; cd15884"
                     /db_xref="CDD:277237"
     Site            order(149,151..152,155..160,162..163,166..167,169..171,
                     173..174,177..178,180..181,183..188,190..191,194,197,201,
                     204,207)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277237"
     Site            180
                     /site_type="other"
                     /note="zero layer"
                     /db_xref="CDD:277237"
     CDS             1..211
                     /gene="SNAP23"
                     /coded_by="XM_061157469.1:233..868"
                     /db_xref="GeneID:133066414"
ORIGIN      
        1 mdnlsaeemq lranqvtdes lestrrilgl aiesqdagik titildeqge qlkrieegmd
       61 qinkdmreae ktltelnkcc glcvcpcsrt knfesskayk ttwgdggass asnivskqpg
      121 rvtngqpqqa tvgaasggyi kritndared emeenltqvg dilgnlknma ldmgneieaq
      181 nrqieritek adtnkdridn anarakklid s
//
LOCUS       XP_061013453             211 aa            linear   MAM 02-DEC-2023
DEFINITION  synaptosomal-associated protein 23 [Dama dama].
ACCESSION   XP_061013453
VERSION     XP_061013453.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157470.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..211
                     /product="synaptosomal-associated protein 23"
                     /calculated_mol_wt=23098
     Region          9..75
                     /region_name="SNARE_SNAP23N"
                     /note="N-terminal SNARE motif of SNAP23; cd15895"
                     /db_xref="CDD:277248"
     Site            order(13,16..21,23..28,30..31,34..35,37..42,44..45,47..49,
                     51..56,58..59,61..63,65..66,68..70,72..73,75)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277248"
     Site            48
                     /site_type="active"
                     /note="zero layer [active]"
                     /db_xref="CDD:277248"
     Region          86..148
                     /region_name="SNAP-25"
                     /note="SNAP-25 family; pfam00835"
                     /db_xref="CDD:459955"
     Region          149..207
                     /region_name="SNARE_SNAP23C"
                     /note="C-terminal SNARE motif of SNAP23; cd15884"
                     /db_xref="CDD:277237"
     Site            order(149,151..152,155..160,162..163,166..167,169..171,
                     173..174,177..178,180..181,183..188,190..191,194,197,201,
                     204,207)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277237"
     Site            180
                     /site_type="other"
                     /note="zero layer"
                     /db_xref="CDD:277237"
     CDS             1..211
                     /gene="SNAP23"
                     /coded_by="XM_061157470.1:185..820"
                     /db_xref="GeneID:133066414"
ORIGIN      
        1 mdnlsaeemq lranqvtdes lestrrilgl aiesqdagik titildeqge qlkrieegmd
       61 qinkdmreae ktltelnkcc glcvcpcsrt knfesskayk ttwgdggass asnivskqpg
      121 rvtngqpqqa tvgaasggyi kritndared emeenltqvg dilgnlknma ldmgneieaq
      181 nrqieritek adtnkdridn anarakklid s
//
LOCUS       XP_061013454             914 aa            linear   MAM 02-DEC-2023
DEFINITION  neutral alpha-glucosidase C isoform X1 [Dama dama].
ACCESSION   XP_061013454
VERSION     XP_061013454.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157471.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..914
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..914
                     /product="neutral alpha-glucosidase C isoform X1"
                     /calculated_mol_wt=103410
     Region          213..353
                     /region_name="GH31_N"
                     /note="N-terminal domain of glycosyl hydrolase family 31
                     (GH31); cd14752"
                     /db_xref="CDD:270212"
     Site            252
                     /site_type="active"
                     /db_xref="CDD:270212"
     Region          353..820
                     /region_name="GH31_GANC_GANAB_alpha"
                     /note="neutral alpha-glucosidase C, neutral
                     alpha-glucosidase AB; cd06603"
                     /db_xref="CDD:269889"
     Site            order(398,511,571,584,587,620,645)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:269889"
     CDS             1..914
                     /gene="GANC"
                     /coded_by="XM_061157471.1:522..3266"
                     /db_xref="GeneID:133066415"
ORIGIN      
        1 mesaekdeis vedeavdkni fkdcskiafy rrqkqllskk styralldsv ttgkdsarfq
       61 iinepakvpl laevcgiegn ifrlkineei plkpryevpd vltsklttvr ltscpgdtgs
      121 lvlasgkgdl kchitanpfk vnlvseeevv msinslgqly feqlqippkq ratkkneeda
      181 svdttqenqe elglweekfe nfvdvkvngp asigldfslh gfehlygipq haeshqlknt
      241 sdgdayrlyn ldvygykihd kmgiygsvpy llahklgrtl gifwlnaset lveiktepav
      301 kytltqmgpv aakqkvgsrt dvrwmsesgi idvflltgpt psdvfkqysy ltgtqamppl
      361 fslgyhqcrw nyedeqdvka vdagfdehni pydvmwldie htegkryftw nkkrfpnpkr
      421 mqdllrskkr klvvisdphi kidpnysvya kakeqgffvk sheggdfegv cwpglssyld
      481 ftnpkvrewy sslfafsvyq gstdilyiwn dmnepsvfkg peqtmqknai hhgnwehrel
      541 hniygfyqqm attegliqrs kgkerpfvlt rsffagsqky gavwtgdnta ewsylkisip
      601 mlltlsvtgi sfcgadvggf igdpeaellv rwyqagayqp ffrghatmkt krrepwlfge
      661 ehtrlireai rerytllpyw yslfysahva sqpvmrplwv efpneletfs vedeymlgsa
      721 llvhpvtepk atvvdvflpg sseiwydskt fahwkgactv kipvtldsip vfqrggsvvp
      781 vkttigrstg ymtdspyglr valstkgsam gefylddghs fqylhqkqfl hrkfsfssgv
      841 ltnscaderg hypskcvveq ilvlglkkqp ssvtahsadg saqpvaftyy aatsalnlet
      901 lslkigadwk vhiq
//
LOCUS       XP_061013455             914 aa            linear   MAM 02-DEC-2023
DEFINITION  neutral alpha-glucosidase C isoform X1 [Dama dama].
ACCESSION   XP_061013455
VERSION     XP_061013455.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157472.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..914
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..914
                     /product="neutral alpha-glucosidase C isoform X1"
                     /calculated_mol_wt=103410
     Region          213..353
                     /region_name="GH31_N"
                     /note="N-terminal domain of glycosyl hydrolase family 31
                     (GH31); cd14752"
                     /db_xref="CDD:270212"
     Site            252
                     /site_type="active"
                     /db_xref="CDD:270212"
     Region          353..820
                     /region_name="GH31_GANC_GANAB_alpha"
                     /note="neutral alpha-glucosidase C, neutral
                     alpha-glucosidase AB; cd06603"
                     /db_xref="CDD:269889"
     Site            order(398,511,571,584,587,620,645)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:269889"
     CDS             1..914
                     /gene="GANC"
                     /coded_by="XM_061157472.1:412..3156"
                     /db_xref="GeneID:133066415"
ORIGIN      
        1 mesaekdeis vedeavdkni fkdcskiafy rrqkqllskk styralldsv ttgkdsarfq
       61 iinepakvpl laevcgiegn ifrlkineei plkpryevpd vltsklttvr ltscpgdtgs
      121 lvlasgkgdl kchitanpfk vnlvseeevv msinslgqly feqlqippkq ratkkneeda
      181 svdttqenqe elglweekfe nfvdvkvngp asigldfslh gfehlygipq haeshqlknt
      241 sdgdayrlyn ldvygykihd kmgiygsvpy llahklgrtl gifwlnaset lveiktepav
      301 kytltqmgpv aakqkvgsrt dvrwmsesgi idvflltgpt psdvfkqysy ltgtqamppl
      361 fslgyhqcrw nyedeqdvka vdagfdehni pydvmwldie htegkryftw nkkrfpnpkr
      421 mqdllrskkr klvvisdphi kidpnysvya kakeqgffvk sheggdfegv cwpglssyld
      481 ftnpkvrewy sslfafsvyq gstdilyiwn dmnepsvfkg peqtmqknai hhgnwehrel
      541 hniygfyqqm attegliqrs kgkerpfvlt rsffagsqky gavwtgdnta ewsylkisip
      601 mlltlsvtgi sfcgadvggf igdpeaellv rwyqagayqp ffrghatmkt krrepwlfge
      661 ehtrlireai rerytllpyw yslfysahva sqpvmrplwv efpneletfs vedeymlgsa
      721 llvhpvtepk atvvdvflpg sseiwydskt fahwkgactv kipvtldsip vfqrggsvvp
      781 vkttigrstg ymtdspyglr valstkgsam gefylddghs fqylhqkqfl hrkfsfssgv
      841 ltnscaderg hypskcvveq ilvlglkkqp ssvtahsadg saqpvaftyy aatsalnlet
      901 lslkigadwk vhiq
//
LOCUS       XP_061013456             914 aa            linear   MAM 02-DEC-2023
DEFINITION  neutral alpha-glucosidase C isoform X1 [Dama dama].
ACCESSION   XP_061013456
VERSION     XP_061013456.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157473.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..914
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..914
                     /product="neutral alpha-glucosidase C isoform X1"
                     /calculated_mol_wt=103410
     Region          213..353
                     /region_name="GH31_N"
                     /note="N-terminal domain of glycosyl hydrolase family 31
                     (GH31); cd14752"
                     /db_xref="CDD:270212"
     Site            252
                     /site_type="active"
                     /db_xref="CDD:270212"
     Region          353..820
                     /region_name="GH31_GANC_GANAB_alpha"
                     /note="neutral alpha-glucosidase C, neutral
                     alpha-glucosidase AB; cd06603"
                     /db_xref="CDD:269889"
     Site            order(398,511,571,584,587,620,645)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:269889"
     CDS             1..914
                     /gene="GANC"
                     /coded_by="XM_061157473.1:579..3323"
                     /db_xref="GeneID:133066415"
ORIGIN      
        1 mesaekdeis vedeavdkni fkdcskiafy rrqkqllskk styralldsv ttgkdsarfq
       61 iinepakvpl laevcgiegn ifrlkineei plkpryevpd vltsklttvr ltscpgdtgs
      121 lvlasgkgdl kchitanpfk vnlvseeevv msinslgqly feqlqippkq ratkkneeda
      181 svdttqenqe elglweekfe nfvdvkvngp asigldfslh gfehlygipq haeshqlknt
      241 sdgdayrlyn ldvygykihd kmgiygsvpy llahklgrtl gifwlnaset lveiktepav
      301 kytltqmgpv aakqkvgsrt dvrwmsesgi idvflltgpt psdvfkqysy ltgtqamppl
      361 fslgyhqcrw nyedeqdvka vdagfdehni pydvmwldie htegkryftw nkkrfpnpkr
      421 mqdllrskkr klvvisdphi kidpnysvya kakeqgffvk sheggdfegv cwpglssyld
      481 ftnpkvrewy sslfafsvyq gstdilyiwn dmnepsvfkg peqtmqknai hhgnwehrel
      541 hniygfyqqm attegliqrs kgkerpfvlt rsffagsqky gavwtgdnta ewsylkisip
      601 mlltlsvtgi sfcgadvggf igdpeaellv rwyqagayqp ffrghatmkt krrepwlfge
      661 ehtrlireai rerytllpyw yslfysahva sqpvmrplwv efpneletfs vedeymlgsa
      721 llvhpvtepk atvvdvflpg sseiwydskt fahwkgactv kipvtldsip vfqrggsvvp
      781 vkttigrstg ymtdspyglr valstkgsam gefylddghs fqylhqkqfl hrkfsfssgv
      841 ltnscaderg hypskcvveq ilvlglkkqp ssvtahsadg saqpvaftyy aatsalnlet
      901 lslkigadwk vhiq
//
LOCUS       XP_061013457             914 aa            linear   MAM 02-DEC-2023
DEFINITION  neutral alpha-glucosidase C isoform X1 [Dama dama].
ACCESSION   XP_061013457
VERSION     XP_061013457.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157474.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..914
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..914
                     /product="neutral alpha-glucosidase C isoform X1"
                     /calculated_mol_wt=103410
     Region          213..353
                     /region_name="GH31_N"
                     /note="N-terminal domain of glycosyl hydrolase family 31
                     (GH31); cd14752"
                     /db_xref="CDD:270212"
     Site            252
                     /site_type="active"
                     /db_xref="CDD:270212"
     Region          353..820
                     /region_name="GH31_GANC_GANAB_alpha"
                     /note="neutral alpha-glucosidase C, neutral
                     alpha-glucosidase AB; cd06603"
                     /db_xref="CDD:269889"
     Site            order(398,511,571,584,587,620,645)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:269889"
     CDS             1..914
                     /gene="GANC"
                     /coded_by="XM_061157474.1:121..2865"
                     /db_xref="GeneID:133066415"
ORIGIN      
        1 mesaekdeis vedeavdkni fkdcskiafy rrqkqllskk styralldsv ttgkdsarfq
       61 iinepakvpl laevcgiegn ifrlkineei plkpryevpd vltsklttvr ltscpgdtgs
      121 lvlasgkgdl kchitanpfk vnlvseeevv msinslgqly feqlqippkq ratkkneeda
      181 svdttqenqe elglweekfe nfvdvkvngp asigldfslh gfehlygipq haeshqlknt
      241 sdgdayrlyn ldvygykihd kmgiygsvpy llahklgrtl gifwlnaset lveiktepav
      301 kytltqmgpv aakqkvgsrt dvrwmsesgi idvflltgpt psdvfkqysy ltgtqamppl
      361 fslgyhqcrw nyedeqdvka vdagfdehni pydvmwldie htegkryftw nkkrfpnpkr
      421 mqdllrskkr klvvisdphi kidpnysvya kakeqgffvk sheggdfegv cwpglssyld
      481 ftnpkvrewy sslfafsvyq gstdilyiwn dmnepsvfkg peqtmqknai hhgnwehrel
      541 hniygfyqqm attegliqrs kgkerpfvlt rsffagsqky gavwtgdnta ewsylkisip
      601 mlltlsvtgi sfcgadvggf igdpeaellv rwyqagayqp ffrghatmkt krrepwlfge
      661 ehtrlireai rerytllpyw yslfysahva sqpvmrplwv efpneletfs vedeymlgsa
      721 llvhpvtepk atvvdvflpg sseiwydskt fahwkgactv kipvtldsip vfqrggsvvp
      781 vkttigrstg ymtdspyglr valstkgsam gefylddghs fqylhqkqfl hrkfsfssgv
      841 ltnscaderg hypskcvveq ilvlglkkqp ssvtahsadg saqpvaftyy aatsalnlet
      901 lslkigadwk vhiq
//
LOCUS       XP_061013458             868 aa            linear   MAM 02-DEC-2023
DEFINITION  neutral alpha-glucosidase C isoform X2 [Dama dama].
ACCESSION   XP_061013458
VERSION     XP_061013458.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157475.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..868
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..868
                     /product="neutral alpha-glucosidase C isoform X2"
                     /calculated_mol_wt=98011
     Region          213..353
                     /region_name="GH31_N"
                     /note="N-terminal domain of glycosyl hydrolase family 31
                     (GH31); cd14752"
                     /db_xref="CDD:270212"
     Site            252
                     /site_type="active"
                     /db_xref="CDD:270212"
     Region          353..774
                     /region_name="GH31_GANC_GANAB_alpha"
                     /note="neutral alpha-glucosidase C, neutral
                     alpha-glucosidase AB; cd06603"
                     /db_xref="CDD:269889"
     Site            order(398,525,538,541,574,599)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:269889"
     CDS             1..868
                     /gene="GANC"
                     /coded_by="XM_061157475.1:522..3128"
                     /db_xref="GeneID:133066415"
ORIGIN      
        1 mesaekdeis vedeavdkni fkdcskiafy rrqkqllskk styralldsv ttgkdsarfq
       61 iinepakvpl laevcgiegn ifrlkineei plkpryevpd vltsklttvr ltscpgdtgs
      121 lvlasgkgdl kchitanpfk vnlvseeevv msinslgqly feqlqippkq ratkkneeda
      181 svdttqenqe elglweekfe nfvdvkvngp asigldfslh gfehlygipq haeshqlknt
      241 sdgdayrlyn ldvygykihd kmgiygsvpy llahklgrtl gifwlnaset lveiktepav
      301 kytltqmgpv aakqkvgsrt dvrwmsesgi idvflltgpt psdvfkqysy ltgtqamppl
      361 fslgyhqcrw nyedeqdvka vdagfdehni pydvmwldie htegkryftw nkkrfpnpkr
      421 mqdllrskkr klvvisdphi kidpnysvya kakeqgffvk sheggdfegv cwpgpeqtmq
      481 knaihhgnwe hrelhniygf yqqmattegl iqrskgkerp fvltrsffag sqkygavwtg
      541 dntaewsylk isipmlltls vtgisfcgad vggfigdpea ellvrwyqag ayqpffrgha
      601 tmktkrrepw lfgeehtrli reairerytl lpywyslfys ahvasqpvmr plwvefpnel
      661 etfsvedeym lgsallvhpv tepkatvvdv flpgsseiwy dsktfahwkg actvkipvtl
      721 dsipvfqrgg svvpvkttig rstgymtdsp yglrvalstk gsamgefyld dghsfqylhq
      781 kqflhrkfsf ssgvltnsca derghypskc vveqilvlgl kkqpssvtah sadgsaqpva
      841 ftyyaatsal nletlslkig adwkvhiq
//
LOCUS       XP_061013459             476 aa            linear   MAM 02-DEC-2023
DEFINITION  neutral alpha-glucosidase C isoform X3 [Dama dama].
ACCESSION   XP_061013459
VERSION     XP_061013459.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157476.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..476
                     /product="neutral alpha-glucosidase C isoform X3"
                     /calculated_mol_wt=53929
     Region          215..>474
                     /region_name="YicI"
                     /note="Alpha-glucosidase/xylosidase, GH31 family
                     [Carbohydrate transport and metabolism]; COG1501"
                     /db_xref="CDD:441110"
     Region          353..>474
                     /region_name="AmyAc_family"
                     /note="Alpha amylase catalytic domain family; cl38930"
                     /db_xref="CDD:476817"
     CDS             1..476
                     /gene="GANC"
                     /coded_by="XM_061157476.1:522..1952"
                     /db_xref="GeneID:133066415"
ORIGIN      
        1 mesaekdeis vedeavdkni fkdcskiafy rrqkqllskk styralldsv ttgkdsarfq
       61 iinepakvpl laevcgiegn ifrlkineei plkpryevpd vltsklttvr ltscpgdtgs
      121 lvlasgkgdl kchitanpfk vnlvseeevv msinslgqly feqlqippkq ratkkneeda
      181 svdttqenqe elglweekfe nfvdvkvngp asigldfslh gfehlygipq haeshqlknt
      241 sdgdayrlyn ldvygykihd kmgiygsvpy llahklgrtl gifwlnaset lveiktepav
      301 kytltqmgpv aakqkvgsrt dvrwmsesgi idvflltgpt psdvfkqysy ltgtqamppl
      361 fslgyhqcrw nyedeqdvka vdagfdehni pydvmwldie htegkryftw nkkrfpnpkr
      421 mqdllrskkr klvvisdphi kidpnysvya kakeqgffvk sheggdfegv cwpgiy
//
LOCUS       XP_061013460             423 aa            linear   MAM 02-DEC-2023
DEFINITION  neutral alpha-glucosidase C isoform X4 [Dama dama].
ACCESSION   XP_061013460
VERSION     XP_061013460.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157477.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..423
                     /product="neutral alpha-glucosidase C isoform X4"
                     /calculated_mol_wt=47233
     Region          213..352
                     /region_name="GH31_N"
                     /note="N-terminal domain of glycosyl hydrolase family 31
                     (GH31); cd14752"
                     /db_xref="CDD:270212"
     Site            252
                     /site_type="active"
                     /db_xref="CDD:270212"
     CDS             1..423
                     /gene="GANC"
                     /coded_by="XM_061157477.1:522..1793"
                     /db_xref="GeneID:133066415"
ORIGIN      
        1 mesaekdeis vedeavdkni fkdcskiafy rrqkqllskk styralldsv ttgkdsarfq
       61 iinepakvpl laevcgiegn ifrlkineei plkpryevpd vltsklttvr ltscpgdtgs
      121 lvlasgkgdl kchitanpfk vnlvseeevv msinslgqly feqlqippkq ratkkneeda
      181 svdttqenqe elglweekfe nfvdvkvngp asigldfslh gfehlygipq haeshqlknt
      241 sdgdayrlyn ldvygykihd kmgiygsvpy llahklgrtl gifwlnaset lveiktepav
      301 kytltqmgpv aakqkvgsrt dvrwmsesgi idvflltgpt psdvfkqysy ltavpldmwg
      361 lcsstrdlth tlcsgsresq lpdhqgscks gffktknfck skniiksekp tcrmgenick
      421 syi
//
LOCUS       XP_061013461             354 aa            linear   MAM 02-DEC-2023
DEFINITION  neutral alpha-glucosidase C isoform X5 [Dama dama].
ACCESSION   XP_061013461
VERSION     XP_061013461.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157478.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..354
                     /product="neutral alpha-glucosidase C isoform X5"
                     /calculated_mol_wt=39546
     Region          213..352
                     /region_name="GH31_N"
                     /note="N-terminal domain of glycosyl hydrolase family 31
                     (GH31); cd14752"
                     /db_xref="CDD:270212"
     Site            252
                     /site_type="active"
                     /db_xref="CDD:270212"
     CDS             1..354
                     /gene="GANC"
                     /coded_by="XM_061157478.1:522..1586"
                     /db_xref="GeneID:133066415"
ORIGIN      
        1 mesaekdeis vedeavdkni fkdcskiafy rrqkqllskk styralldsv ttgkdsarfq
       61 iinepakvpl laevcgiegn ifrlkineei plkpryevpd vltsklttvr ltscpgdtgs
      121 lvlasgkgdl kchitanpfk vnlvseeevv msinslgqly feqlqippkq ratkkneeda
      181 svdttqenqe elglweekfe nfvdvkvngp asigldfslh gfehlygipq haeshqlknt
      241 sdgdayrlyn ldvygykihd kmgiygsvpy llahklgrtl gifwlnaset lveiktepav
      301 kytltqmgpv aakqkvgsrt dvrwmsesgi idvflltgpt psdvfkqysy ltep
//
LOCUS       XP_061013462              89 aa            linear   MAM 02-DEC-2023
DEFINITION  neutral alpha-glucosidase C isoform X6 [Dama dama].
ACCESSION   XP_061013462
VERSION     XP_061013462.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157479.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..89
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..89
                     /product="neutral alpha-glucosidase C isoform X6"
                     /calculated_mol_wt=9993
     CDS             1..89
                     /gene="GANC"
                     /coded_by="XM_061157479.1:522..791"
                     /db_xref="GeneID:133066415"
ORIGIN      
        1 mesaekdeis vedeavdkni fkdcskiafy rrqkqllskk styralldsv ttgkdsarfq
       61 iinepaksic kfspettlla aftrmrgnl
//
LOCUS       XP_061013463             556 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 87A isoform X1 [Dama dama].
ACCESSION   XP_061013463
VERSION     XP_061013463.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157480.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..556
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..556
                     /product="transmembrane protein 87A isoform X1"
                     /calculated_mol_wt=63340
     Region          206..468
                     /region_name="Lung_7-TM_R"
                     /note="Lung seven transmembrane receptor; pfam06814"
                     /db_xref="CDD:369089"
     CDS             1..556
                     /gene="TMEM87A"
                     /coded_by="XM_061157480.1:59..1729"
                     /db_xref="GeneID:133066417"
ORIGIN      
        1 mavaawlqvv pvillllgar tsplslfsvg papvaaagrs kwhipipsak nyfsfgkilf
       61 knttiflkfd gepcdaslnv twylksadcy neiynfklee vdtylenlke kkdlsgkyet
      121 ssklfqncse lfkaqsfsgd ivhrlpllge rqeakengtn ltftgdktvm hdplktwqda
      181 pyifivhvgi ssskessken srsnlftmtv evkgpyeylt leeyplmiff mvmcivyvlf
      241 gvlwlawsac ywrdllriqf wigaviflgm lekavfyaef qnirykgesv qgalilaell
      301 savkrslart lviivslgyg ivkprlgvtl hkvvvagaly llfsgmegvl rvtgyfsypl
      361 tlivnlalsa idaciilwif isltqtmkll klrrnivkls lyrhftntli lavaasivfi
      421 iwttmkfriv tcqsdwrelw vddaiwrllf smilfvimvl wrpsannqrf afsplseeee
      481 edeqkepmlk esfegmkmrs tkqepngnsk vnkaqeddlk wveenvpssv tdvalpalld
      541 sdeermithf erskme
//
LOCUS       XP_061013464             555 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 87A isoform X2 [Dama dama].
ACCESSION   XP_061013464
VERSION     XP_061013464.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157481.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..555
                     /product="transmembrane protein 87A isoform X2"
                     /calculated_mol_wt=63194
     Region          206..467
                     /region_name="Lung_7-TM_R"
                     /note="Lung seven transmembrane receptor; pfam06814"
                     /db_xref="CDD:369089"
     CDS             1..555
                     /gene="TMEM87A"
                     /coded_by="XM_061157481.1:59..1726"
                     /db_xref="GeneID:133066417"
ORIGIN      
        1 mavaawlqvv pvillllgar tsplslfsvg papvaaagrs kwhipipsak nyfsfgkilf
       61 knttiflkfd gepcdaslnv twylksadcy neiynfklee vdtylenlke kkdlsgkyet
      121 ssklfqncse lfkaqsfsgd ivhrlpllge rqeakengtn ltftgdktvm hdplktwqda
      181 pyifivhvgi ssskessken srsnlftmtv evkgpyeylt leeyplmiff mvmcivyvlf
      241 gvlwlawsac ywrdllriqf wigaviflgm lekavfyaef qnirykgesv qgalilaell
      301 savkrslart lviivslgyg ivkprlgvtl hkvvvagaly llfsgmegvl rvtgaqtdla
      361 slafiplafl dtalcwwifi sltqtmkllk lrrnivklsl yrhftntlil avaasivfii
      421 wttmkfrivt cqsdwrelwv ddaiwrllfs milfvimvlw rpsannqrfa fsplseeeee
      481 deqkepmlke sfegmkmrst kqepngnskv nkaqeddlkw veenvpssvt dvalpallds
      541 deermithfe rskme
//
LOCUS       XP_061013465             516 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 87A isoform X3 [Dama dama].
ACCESSION   XP_061013465
VERSION     XP_061013465.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157482.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..516
                     /product="transmembrane protein 87A isoform X3"
                     /calculated_mol_wt=59269
     Region          166..428
                     /region_name="Lung_7-TM_R"
                     /note="Lung seven transmembrane receptor; pfam06814"
                     /db_xref="CDD:369089"
     CDS             1..516
                     /gene="TMEM87A"
                     /coded_by="XM_061157482.1:63..1613"
                     /db_xref="GeneID:133066417"
ORIGIN      
        1 mavaawlqak nyfsfgkilf knttiflkfd gepcdaslnv twylksadcy neiynfklee
       61 vdtylenlke kkdlsgkyet ssklfqncse lfkaqsfsgd ivhrlpllge rqeakengtn
      121 ltftgdktvm hdplktwqda pyifivhvgi ssskessken srsnlftmtv evkgpyeylt
      181 leeyplmiff mvmcivyvlf gvlwlawsac ywrdllriqf wigaviflgm lekavfyaef
      241 qnirykgesv qgalilaell savkrslart lviivslgyg ivkprlgvtl hkvvvagaly
      301 llfsgmegvl rvtgyfsypl tlivnlalsa idaciilwif isltqtmkll klrrnivkls
      361 lyrhftntli lavaasivfi iwttmkfriv tcqsdwrelw vddaiwrllf smilfvimvl
      421 wrpsannqrf afsplseeee edeqkepmlk esfegmkmrs tkqepngnsk vnkaqeddlk
      481 wveenvpssv tdvalpalld sdeermithf erskme
//
LOCUS       XP_061013466             117 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM104A-like [Dama dama].
ACCESSION   XP_061013466
VERSION     XP_061013466.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157483.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..117
                     /product="protein FAM104A-like"
                     /calculated_mol_wt=12531
     Region          8..116
                     /region_name="FAM104"
                     /note="Family 104; pfam15434"
                     /db_xref="CDD:464715"
     CDS             1..117
                     /gene="LOC133066418"
                     /coded_by="XM_061157483.1:1656..2009"
                     /db_xref="GeneID:133066418"
ORIGIN      
        1 mseclrprkr rrngseedhh lppqtkrssr npvfhdswdt essssdgggs ssssisspdr
       61 asgpesslhh laagsgphtp qpapapsalc pgpyfhinqt lkeahfhslq hrgrpps
//
LOCUS       XP_061013467             875 aa            linear   MAM 02-DEC-2023
DEFINITION  vam6/Vps39-like protein [Dama dama].
ACCESSION   XP_061013467
VERSION     XP_061013467.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157484.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..875
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..875
                     /product="vam6/Vps39-like protein"
                     /calculated_mol_wt=100535
     Region          24..279
                     /region_name="CNH"
                     /note="CNH domain; cl02434"
                     /db_xref="CDD:470577"
     Region          449..551
                     /region_name="Vps39_1"
                     /note="Vacuolar sorting protein 39 domain 1; pfam10366"
                     /db_xref="CDD:371008"
     Region          584..735
                     /region_name="Clathrin"
                     /note="Region in Clathrin and VPS; pfam00637"
                     /db_xref="CDD:459884"
     Region          761..869
                     /region_name="Vps39_2"
                     /note="Vacuolar sorting protein 39 domain 2; pfam10367"
                     /db_xref="CDD:402126"
     CDS             1..875
                     /gene="VPS39"
                     /coded_by="XM_061157484.1:132..2759"
                     /db_xref="GeneID:133066420"
ORIGIN      
        1 mhdafepvpi leklplqidc laaweewllv gtkqghllly rirkdvgcnr fevtleksnk
       61 nfskkiqqih vvsqfkilvs llenniyvhd lltfqqittv skakgaslft cdlqhtetge
      121 evlrmcvavk kklqlyfwkd refhelqgdf svpdvpksma wcensicvgf krdyylirvd
      181 gkgankelfp tgkqleplva pladgkvavg qddltvvlne egictqkcal nwtdipvame
      241 hqppyiiavl pryveirtfe prllvqsiel qrprfitsgg sniiyvasnh fvwrlipvpm
      301 atqiqqllqd kqfelalqla emkddsdsek qqqihhiknl yafnlfcqkr fdesmqvfak
      361 lgtdpthvmg lypdllptdy rkqlqypnpl pvlsgaelek ahlalidylt qkrsqlvkkl
      421 ndsdhqssts plmegtptik skkkllqiid ttllkcylht nvalvapllr lennhchiee
      481 sehvlkkahk yseliilyek kglhekalqv lvdqskkans plkghertvq ylqhlgtenl
      541 hlifsysvwv lrdfpedglk iftedlpeve alprdrvlgf lvenfkglai pylehvihvw
      601 eetgsrfhnc liqlycekvq glmkeyllsf pagkapvpag eeegelgeyr rkllmfleis
      661 syydpgrlic dfpfdgllee ralllgrmgk heqalfiyvh ilkdtrmaee ychkhydqnk
      721 dgnkdvylsl lrmylsppsv hclgpiklel lepqanlqaa lqvlelhhsk ldttkainll
      781 pantqindir iflekvleen aqkkrfnqvl knllhaeflr vqeerilhqq vkciiteekv
      841 cmvckkkign safarypngv vvhyfcskev npadt
//
LOCUS       XP_061013468             863 aa            linear   MAM 02-DEC-2023
DEFINITION  cytosolic phospholipase A2 zeta isoform X1 [Dama dama].
ACCESSION   XP_061013468
VERSION     XP_061013468.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157485.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..863
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..863
                     /product="cytosolic phospholipase A2 zeta isoform X1"
                     /calculated_mol_wt=96301
     Region          46..181
                     /region_name="C2_cPLA2"
                     /note="C2 domain present in cytosolic PhosphoLipase A2
                     (cPLA2); cd04036"
                     /db_xref="CDD:176001"
     Site            order(81,84,106,134,136)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176001"
     Region          200..318
                     /region_name="cPLA2_C2"
                     /note="Cytosolic phospholipases A2 C2-domain; pfam18695"
                     /db_xref="CDD:465834"
     Region          317..856
                     /region_name="Patatin_and_cPLA2"
                     /note="Patatins and Phospholipases; cl11396"
                     /db_xref="CDD:416256"
     Site            order(378..379,381,409,694)
                     /site_type="active"
                     /db_xref="CDD:132836"
     Site            407..411
                     /site_type="other"
                     /note="nucleophile elbow"
                     /db_xref="CDD:132836"
     CDS             1..863
                     /gene="PLA2G4F"
                     /coded_by="XM_061157485.1:70..2661"
                     /db_xref="GeneID:133066421"
ORIGIN      
        1 mlwalwprwl asrglpllgv vqlqkrekrg pqwrqwrret hpyydlqvkv lrakniqgtd
       61 lrnlsshkle aedlsilptv skadcyvqlw lpsaspspar trvvancrdp ewnetfhyri
      121 hgavknvlel tlydkdilen dqlslllfdl rslkpgqphr htfplsqqds relqvefvle
      181 ksqvpasevi sngvlvvqpc lriqgtlggd gtapclehgp rqiqlavpga yekpqllplq
      241 ppmetgvpat ftfhvnpvls srlevdpgek lmvqgdprak eeaqtskpgi llsslalgqe
      301 qqcvvalgeg qevamsvkae mssgdldlrl gfdlcdgeke flekrkrlvs kalqqalgls
      361 qapdssqvpv vavlgsgggt ramsslygsl aglqelglld tvtylsgvsg stwcistlyk
      421 dpawsqvalq gpieraqarv csskmgamst erlqyyaqel giressghss slvdlwgllv
      481 eyflyqeenp aklsdqkeav sqgqnpypiy asvnvrsnvs gedfaewcef tphevgfpky
      541 gayvptelfg sdffmgrllq lrpesricyl qgmwgsafaa sldeiflkta grglsfldwc
      601 rdsvkitddc qelqlhdaar lrtrlftpqg pfyqvvqdic tsrltsaens nftrglllhe
      661 dyvsgrefva wkdlhpdafp neltpmrdcl nlvdggfain spfplslqpq ravdlilsfd
      721 yslhapfevl qmtekycldr gisfprievs pedmkephec ylfakaedps spiilhfplv
      781 nrtfrthlap gverktaeek aggdfvingp dtpygmmnft yepqefeqlv alsrynvlnn
      841 vetvrkalql aldrrqtgdr tgg
//
LOCUS       XP_061013469             845 aa            linear   MAM 02-DEC-2023
DEFINITION  cytosolic phospholipase A2 zeta isoform X2 [Dama dama].
ACCESSION   XP_061013469
VERSION     XP_061013469.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157486.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..845
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..845
                     /product="cytosolic phospholipase A2 zeta isoform X2"
                     /calculated_mol_wt=94310
     Region          46..163
                     /region_name="C2_cPLA2"
                     /note="C2 domain present in cytosolic PhosphoLipase A2
                     (cPLA2); cd04036"
                     /db_xref="CDD:176001"
     Site            order(63,66,88,116,118)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176001"
     Region          182..300
                     /region_name="cPLA2_C2"
                     /note="Cytosolic phospholipases A2 C2-domain; pfam18695"
                     /db_xref="CDD:465834"
     Region          299..838
                     /region_name="Patatin_and_cPLA2"
                     /note="Patatins and Phospholipases; cl11396"
                     /db_xref="CDD:416256"
     Site            order(360..361,363,391,676)
                     /site_type="active"
                     /db_xref="CDD:132836"
     Site            389..393
                     /site_type="other"
                     /note="nucleophile elbow"
                     /db_xref="CDD:132836"
     CDS             1..845
                     /gene="PLA2G4F"
                     /coded_by="XM_061157486.1:70..2607"
                     /db_xref="GeneID:133066421"
ORIGIN      
        1 mlwalwprwl asrglpllgv vqlqkrekrg pqwrqwrret hpyydlqvkv lrakniqgtd
       61 llskadcyvq lwlpsaspsp artrvvancr dpewnetfhy rihgavknvl eltlydkdil
      121 endqlslllf dlrslkpgqp hrhtfplsqq dsrelqvefv leksqvpase visngvlvvq
      181 pclriqgtlg gdgtapcleh gprqiqlavp gayekpqllp lqppmetgvp atftfhvnpv
      241 lssrlevdpg eklmvqgdpr akeeaqtskp gillsslalg qeqqcvvalg egqevamsvk
      301 aemssgdldl rlgfdlcdge keflekrkrl vskalqqalg lsqapdssqv pvvavlgsgg
      361 gtramsslyg slaglqelgl ldtvtylsgv sgstwcistl ykdpawsqva lqgpieraqa
      421 rvcsskmgam sterlqyyaq elgiressgh ssslvdlwgl lveyflyqee npaklsdqke
      481 avsqgqnpyp iyasvnvrsn vsgedfaewc eftphevgfp kygayvptel fgsdffmgrl
      541 lqlrpesric ylqgmwgsaf aasldeiflk tagrglsfld wcrdsvkitd dcqelqlhda
      601 arlrtrlftp qgpfyqvvqd ictsrltsae nsnftrglll hedyvsgref vawkdlhpda
      661 fpneltpmrd clnlvdggfa inspfplslq pqravdlils fdyslhapfe vlqmtekycl
      721 drgisfprie vspedmkeph ecylfakaed psspiilhfp lvnrtfrthl apgverktae
      781 ekaggdfvin gpdtpygmmn ftyepqefeq lvalsrynvl nnvetvrkal qlaldrrqtg
      841 drtgg
//
LOCUS       XP_061013471             540 aa            linear   MAM 02-DEC-2023
DEFINITION  EH domain-containing protein 4 [Dama dama].
ACCESSION   XP_061013471
VERSION     XP_061013471.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157488.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..540
                     /product="EH domain-containing protein 4"
                     /calculated_mol_wt=60894
     Region          26..58
                     /region_name="EHD_N"
                     /note="N-terminal EH-domain containing protein; pfam16880"
                     /db_xref="CDD:465295"
     Region          62..302
                     /region_name="EHD"
                     /note="Eps15 homology domain (EHD), C-terminal domain;
                     cd09913"
                     /db_xref="CDD:206740"
     Site            67..74
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206740"
     Site            order(72..75,155,222,224,258..260)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206740"
     Site            96
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206740"
     Site            100..102
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206740"
     Site            155..158
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206740"
     Site            order(157..158,185..186)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206740"
     Site            221..224
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206740"
     Site            258..260
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206740"
     Region          291..396
                     /region_name="DUF5600"
                     /note="Domain of unknown function (DUF5600); pfam18150"
                     /db_xref="CDD:465667"
     Region          440..533
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     CDS             1..540
                     /gene="EHD4"
                     /coded_by="XM_061157488.1:137..1759"
                     /db_xref="GeneID:133066422"
ORIGIN      
        1 mfswlgrqag grggtgadpv qtvtgglrsl yqrkvlplee ayrfhefhsp aledadfenk
       61 pmillvgqys tgkttfiryl leqdfpgmri gpepttdsfi avmygetegn tpgnalvvdp
      121 kkpfrklgrf gnaflnrfmc sqlpnevlks isiidspgil sgekqrisrg ydfcqvlqwf
      181 aervdriill fdahkldisd efseaikafr gqddkirvvl nkadqvdtqq lmrvygalmw
      241 slgkvintpe vlrvyigsfw tqplqntdnr rlfeaeaqdl frdiqslpqk aavrklndli
      301 krarlakvha yiisflkkem psmfgkenkk relisrlpei yiqlqreyhi sagdfpkvka
      361 mqeklenydf tkfhslkpkl ieavdnmltn kisslmnlis qeemsmpppl vqggafdgta
      421 espfnqgyge gakegadeee wvvakdkpvy delfytlspi ngkisginak kemvtsklpn
      481 svlgkiwkla dcdgdgmlde eefalakhli kiklsgyelp sslpphlvpp shrkslskad
//
LOCUS       XP_061013472            3716 aa            linear   MAM 02-DEC-2023
DEFINITION  spectrin beta chain, non-erythrocytic 5 [Dama dama].
ACCESSION   XP_061013472
VERSION     XP_061013472.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157489.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3716
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3716
                     /product="spectrin beta chain, non-erythrocytic 5"
                     /calculated_mol_wt=420796
     Region          1..125
                     /region_name="CH_SPTBN5_rpt1"
                     /note="first calponin homology (CH) domain found in
                     spectrin beta chain, non-erythrocytic 5 (SPTBN5) and
                     similar proteins; cd21247"
                     /db_xref="CDD:409096"
     Site            order(2..3,6,9..10,13..14,17..18,21,77,80..81,84,91,
                     95..103,110..111,113..114,117..118,121..122)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409096"
     Region          19..562
                     /region_name="SAC6"
                     /note="Ca2+-binding actin-bundling protein fimbrin/plastin
                     (EF-Hand superfamily) [Cytoskeleton]; COG5069"
                     /db_xref="CDD:227401"
     Region          140..248
                     /region_name="CH_SF"
                     /note="calponin homology (CH) domain superfamily; cl00030"
                     /db_xref="CDD:469584"
     Site            order(148,198,200..201,204..205,207,220..224,231,233..234,
                     236..237,240..241,244)
                     /site_type="other"
                     /note="actin binding site [polypeptide binding]"
                     /db_xref="CDD:409031"
     Region          503..710
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            603..608
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          711..960
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            859..864
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Site            1065..1070
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1071..1169
                     /region_name="SPEC"
                     /note="Spectrin repeats; smart00150"
                     /db_xref="CDD:197544"
     Region          1173..1377
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1277..1282
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1279..1483
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1382..1387
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1485..1690
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1588..1593
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1695..1906
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1799..1804
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1804..2010
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1905..1910
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          2015..2216
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            2111..2116
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          2117..2327
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            2217..2222
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          2330..2539
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            2432..2437
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          2540..2750
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            2644..2649
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          2751..2952
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            2857..2862
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          2859..3070
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            2963..2968
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          3071..3282
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            3176..3181
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          3286..>3453
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            3388..3393
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     CDS             1..3716
                     /gene="SPTBN5"
                     /coded_by="XM_061157489.1:1..11151"
                     /db_xref="GeneID:133066423"
ORIGIN      
        1 mdsayemghi rklqarhiqm qektftkwin nifqhaqvgi kiqnlctela dgthllrlle
       61 lisgealppp nrgrmrvhfl enssralafl rakvpiplig penivdgdqt lilgliwvii
      121 lrfqishicl dreefgvsaa llsakeallv wcqrktagya ninitdfsrs wsdglsfsal
      181 ihahrpdlld ysslrpdrpl hnlrcafhva eqelgiaqll dpedvaalqp dersimtyvs
      241 lyyhhfsrlh qeqtvqrrlv kilhqlrese alqtqyeelv adllcwiaek qvqleardfp
      301 dnlpamrqll vafasfrtqe kpprlqqrga tearlfrlqt alraqnrrpf lppeglgpve
      361 lsrrwasler aeasrsralq qrllqlerle tlarrfqrka alresfltdt eqvldraaap
      421 paslamvdaa aqrlgmleas ilpqegrfqa laeiaailqq eryhggteva srqleitrrw
      481 erllqrlqgq rkqiagmqav lsllreveaa snqlnelqvl vsstaygqkl tevegllqrh
      541 dlleaqisvl gahvshlahq tmkldsstgt avevlqakar alaqlyqslm slarsrrasl
      601 eqtlqqaell hsceeeeawl rehgqlveea smgpdlsqia aalqkhkale aelhrhqavc
      661 adlvqrgrkl gacgppmrpg pweraevvqg mwqrlwarmd eqgmrlqaal lvqqyfmdva
      721 eadswlqeqr stlesasfgq dqvateallr qhlrlersvr tfgtelhrld eqarvataqa
      781 allvvsalss pkisprnpga whevschsgl wgtqkmalpd epdpdfdpnt ilqtqdrlsq
      841 dyedlraqae rrraqleeav alfgfygscg elqswltkqt tllqtlqpka nnlevmqlky
      901 enfltalavg rglwtevnss aeqlkqrcpg nspqiqlqqe elsqrweqle tlkkeketql
      961 actthacsfl qecgstrvql qnlilqletl elgnsedghh vllvgqqkml vlekdichlq
     1021 raaskveemg padspslqgq vktlqglleq vreqvaqraq aqaqaqthrs flqesqrlll
     1081 wadsiqaklh seeeavdvas aqrllgnhrd lleeihlhqe rlqqlgtkgq pmaasgspdf
     1141 revasalrll ghqsqelkaa weqrqqqlqe glelqkfvrd vdgftascan heaflrldgl
     1201 qegvvetqrl lqqhqergql lealgsraed lrargeklaq sqhpaaykvr eqlqsiqarw
     1261 trvqgrseqr rrqllaslql qewkqdvvel llwmqekgrm lvdepsrdps nilrklrrhe
     1321 aatrelaatq ghveglqqvg rellgsrpha qedvqarlqd lsskweelrr kmaergkqlq
     1381 qarqqdqllr llqeakekme rlegtlqrae mgqdlgssrg lqkqhcqlea esqalasrma
     1441 tlvpeahqvv ssqaiveete kylqrfkalq ghlatrrwql qasvelyhfh hlsdaeltwv
     1501 aehmpvpips sakypdgahr llhkheelra evgahqgqvq rvlgsgrhla asghpqaqhi
     1561 vqrcqelegr wadleqacea qarhlqqava lqqcfldtse ledwveekwp lvssqdyggd
     1621 etatvrlikk hqalqqelar ywssveevgr raqtltgpea paqlgvvqkr lrerlqalqe
     1681 laatrdrele gtlnlhefmr eaenlqgwla srkqvaggge slgedyenvl hlctkfvkfq
     1741 hkvemggqwv atcrqlaenl lerghraapr ahqmqqdlqa awselweltq argrllrdae
     1801 ttlkvhrdml ealtqvqekt tslpcdvaqd lrgleaqlrr heglerelmg teqqlqelle
     1861 tgsevqrlgp rpqahavqqr qqalvqawet lklraeqrra qlerawllar fhvavrdyts
     1921 waasvwqelq veassqgprs gplelsthqq lravlearee ryqqaaqlgq qallaagtci
     1981 kevrdrlqdl rdkrervfqa weqkqerlqa vgreqlflrk cgrldeilka revllktgal
     2041 gssveeveql ihkhetfqkv laaqeeketa lceqvkmlgg praqdllctv lerrarvkel
     2101 vesrqhalht sllmaafvra atqaedwiqe rlqqlkapvp pgdlkaklrh lqkhqafeae
     2161 vqareemiss vvkegealla qshplegeis qrlrelqehw eklrqavalr gkdledkrni
     2221 leflqradaa eawiqemevm vnvsnlgqdl ehcqqlhrql rklrgvward tvndarirsi
     2281 tdfspqlntq dteqlktiwq rqqqlnnrwn sfhgnllryq qqleaaleih glsqklddit
     2341 qqvrekaalv qaldcgkdld nvqrlkqkhk eleqemgllq aqveplerea grvcqrspev
     2401 ahglghqqqe mmdswqqlqs riqnrkesld alheaqelqa vlrellvwaq rlraqldsrr
     2461 spgslaevqr mleehqelka eldsqtdsis larstgqrll aaghpstpni rqalagfnqe
     2521 lsslegawhe hqlhlqqale lqrvlssveq meswlcslea cpaseglgds lanvetllwk
     2581 qrvreqdlea qaekmsalea ttrslfqggh peaqgvlsrc qamllrkeal lerartrcrq
     2641 leelrqlqsf lqdscemaaw lreknlvale egwwdpvelq aqlqqqqnlq aevdprahrq
     2701 qrlqmegqrl lqdghsaset iqerlqelrk lweelqaqcq rraaklqear ealrlrrsve
     2761 eleswlepve lklrvpiggp dqpgldellg aqgeleaavd rkvgqaqall gqaqaqacvq
     2821 eshclardve eqaqrllqrf eslrvplrer rtalearsll lqffrdadee mawvqqklll
     2881 vaardcgqsp salrrlqekh qslesemssh ealtravvgt grklvqaghf aardvaarvq
     2941 qledamgrlr aeaaqrrqrl qqaqeaqsfl telleaeswl eergcgldie dmgqsaeatq
     3001 aflrqleatr rdlegftthi erlqqtaall esgqnpespk vlaqmhavrd thsgllqrae
     3061 grgqglreql qlhqlereal lldawlaskv ataesqdygq dleavkllee kfdafrkdvq
     3121 nlgqarvqal reragslera aprcspqiqa qrsrieaswe rldqavkaht qnlaatrevr
     3181 sleqaaaelq ghmqekatlv ardacdlsll tvqtlqqqhr clerelaame kevarvqtea
     3241 crlgqlhpaa qeglakqlag vqeawatlna kvyerdrqle eaaqghaflr rcrellawaa
     3301 ekqalvslee lagniaraeg llalheelgr eikeyslqaq niqregqrlv dsghcmslev
     3361 tgclqdldrq lralreawal rreryeeswh lqklrqeldq aeawlacreg llldpncghs
     3421 vsdvelllcr hkdfekllas qeekfarlqq eaavdqkqqv kglkpsgsww praqltetgd
     3481 pqpsvpigsc irfttvslec tagtlgdakg apttegilel kqqllpgrrq dtasiasidl
     3541 tgtqheklgd hhdgkhtfsl rlaagetlsa appagqtgsw rgalsswaal eaekskimvl
     3601 aapslspelq arpsgflaer saervpgmpa plrfhggppp awlqgmrvca yscpqptglp
     3661 qtagpaqqta egsrrqscsg qihgpgleen aevapnfrat sedtlegtrr psypap
//
LOCUS       XP_061013473             800 aa            linear   MAM 02-DEC-2023
DEFINITION  cytosolic phospholipase A2 beta [Dama dama].
ACCESSION   XP_061013473
VERSION     XP_061013473.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157490.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..800
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..800
                     /product="cytosolic phospholipase A2 beta"
                     /calculated_mol_wt=89630
     Region          11..130
                     /region_name="C2_cPLA2"
                     /note="C2 domain present in cytosolic PhosphoLipase A2
                     (cPLA2); cd04036"
                     /db_xref="CDD:176001"
     Site            order(29,32,54,82,84)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176001"
     Region          151..242
                     /region_name="cPLA2_C2"
                     /note="Cytosolic phospholipases A2 C2-domain; pfam18695"
                     /db_xref="CDD:465834"
     Region          243..772
                     /region_name="Patatin_and_cPLA2"
                     /note="Patatins and Phospholipases; cl11396"
                     /db_xref="CDD:416256"
     Site            order(304..305,307,335,615)
                     /site_type="active"
                     /db_xref="CDD:132836"
     Site            333..337
                     /site_type="other"
                     /note="nucleophile elbow"
                     /db_xref="CDD:132836"
     CDS             1..800
                     /gene="PLA2G4B"
                     /coded_by="XM_061157490.1:921..3323"
                     /db_xref="GeneID:133066424"
ORIGIN      
        1 malakvpgtc lltirvlqar glpskdivta sdcyvtlwlp tasshqlqtr tvkncrnpvw
       61 nqsfhfrihs qiknivhlrv fdqdllttdd pvlsvlfdvg tlragesrre sfslspqgee
      121 rlevefrlqn ltdgaeclfs ngilvarels clhvrlekag dlqesesrvq lvvpgscegp
      181 qeasvgagsf rfhwpacweq elsihlqdap qeqlkvplra lpsgqvvrlv fptsqeplmk
      241 velkneegpr elavrlgcgp caeeqaflsr rkqvvakalq qalqldgdlr edeipvvaim
      301 atgggiramt slygqlaglk alglldcvsy itgasgstwa lanlyedpew sqkdlagpie
      361 slktqvtksk lgvlaprqll ryqqelaera rlghptcftn lwalineall hdephdhkls
      421 dqrealsrgq nplpiycaln tkeqnlttfe fgewcefspy evgfpkygaf ippelfgsef
      481 fmgrltkqlp esricflegi wsnlyaanlq dslywsseps qfwdrwaqar asldkeqvpl
      541 lkiqepptva griaevftdl ltrrplaqat hnflrgfsfh kdyfqhphfs awkatkldgl
      601 pneltpaepy lclldvgylv ntscppllpp trdvdlilsl dynlhgafqq lqllgrfcqe
      661 qgipfppisp speeqrqpqe chlfldparp dipavlhfpl vnasfrdhsa pgvrrtaeeq
      721 aagevnlsas dspyhyskvt ysledvdkll rltqynicnn qerllealre avqrrrqrtq
      781 hrpsdgrega tsgptapdsl
//
LOCUS       XP_061013474             316 aa            linear   MAM 02-DEC-2023
DEFINITION  bifunctional peptidase and (3S)-lysyl hydroxylase JMJD7 isoform X1
            [Dama dama].
ACCESSION   XP_061013474
VERSION     XP_061013474.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157491.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..316
                     /product="bifunctional peptidase and (3S)-lysyl
                     hydroxylase JMJD7 isoform X1"
                     /calculated_mol_wt=35815
     Region          38..297
                     /region_name="Cupin_8"
                     /note="Cupin-like domain; pfam13621"
                     /db_xref="CDD:463936"
     CDS             1..316
                     /gene="JMJD7"
                     /coded_by="XM_061157491.1:35..985"
                     /db_xref="GeneID:133066425"
ORIGIN      
        1 maeaaldavr relrefpaaa relsvplavp hldeppsplh fyrdwvcpnr pciirnalqh
       61 wpalrkwslp ylratvgste vsvavtpdgy adavrgdrfv mpaerrlpls hvldvlegra
      121 qhpgvlyvqk qcsnlptqlp qllpdvephv pwasealgkm pdavnfwlge aaavtslhkd
      181 hyenlycvvs gekhfllhpp sdrpfipyel ytqatyqlte egsfkmvdee amekvpwipl
      241 dplapdlary psycqaqalr ctvragemly lpalwfhhvq qshgciavnf wydmeydlky
      301 syfqlldsls kvsgln
//
LOCUS       XP_061013475             297 aa            linear   MAM 02-DEC-2023
DEFINITION  bifunctional peptidase and (3S)-lysyl hydroxylase JMJD7 isoform X2
            [Dama dama].
ACCESSION   XP_061013475
VERSION     XP_061013475.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157492.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..297
                     /product="bifunctional peptidase and (3S)-lysyl
                     hydroxylase JMJD7 isoform X2"
                     /calculated_mol_wt=33855
     Region          38..278
                     /region_name="Cupin_8"
                     /note="Cupin-like domain; pfam13621"
                     /db_xref="CDD:463936"
     CDS             1..297
                     /gene="JMJD7"
                     /coded_by="XM_061157492.1:35..928"
                     /db_xref="GeneID:133066425"
ORIGIN      
        1 maeaaldavr relrefpaaa relsvplavp hldeppsplh fyrdwvcpnr pciirnalqh
       61 wpalrkwslp ylratvgste vsvavtpdgy adavrgdrfv mpaerrlpls hvldvlegra
      121 qhpgvlyvqk qcsnlptqlp qllpdvephv pwasealvhk dhyenlycvv sgekhfllhp
      181 psdrpfipye lytqatyqlt eegsfkmvde eamekvpwip ldplapdlar ypsycqaqal
      241 rctvrageml ylpalwfhhv qqshgciavn fwydmeydlk ysyfqlldsl skvsgln
//
LOCUS       XP_061013476            3152 aa            linear   MAM 02-DEC-2023
DEFINITION  MAX gene-associated protein isoform X1 [Dama dama].
ACCESSION   XP_061013476
VERSION     XP_061013476.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157493.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3152
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3152
                     /product="MAX gene-associated protein isoform X1"
                     /calculated_mol_wt=344944
     Region          75..260
                     /region_name="T-box_MGA-like"
                     /note="DNA-binding domain of MAX gene-associated protein
                     and related T-box proteins; cd20195"
                     /db_xref="CDD:410321"
     Site            order(102..103,136,180,183,196..197,237..240,245,248..249,
                     252..258)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410321"
     Region          1078..1119
                     /region_name="MGA_dom"
                     /note="MGA, conserved domain; pfam16059"
                     /db_xref="CDD:464998"
     Region          <1554..1855
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          1714..>2065
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          2512..2576
                     /region_name="bHLHzip_MGA"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in MAX gene-associated protein (MGA) and similar
                     proteins; cd18911"
                     /db_xref="CDD:381481"
     Site            order(2512,2514..2516,2518..2520,2522..2523,2527,
                     2546..2547)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381481"
     Site            order(2526,2529..2530,2532..2533,2536..2538,2548,
                     2551..2552,2555,2557..2559,2561..2562,2564..2565,2568,
                     2571..2572,2575..2576)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381481"
     CDS             1..3152
                     /gene="MGA"
                     /coded_by="XM_061157493.1:171..9629"
                     /db_xref="GeneID:133066427"
ORIGIN      
        1 meekqqiila nqdggtvpga aptffvilkq pgngktdqgi lvtnrdacal assvsspgks
       61 kgkiclpadc tvggitvtld nnsmwnefyh rstemiltkq grrmfpycry witgldsnmk
      121 yilvmdispv dnhrykwngr wwepsgkaep hvlgrvfihp espstghywm hqpvsfyklk
      181 ltnntldqeg hiilhsmhry lprlhlvpae kateviqlng pgvhtftfpq teffavtayq
      241 niqitqlkid ynpfakgfrd dglnskpqrd gkqknssdqe gnsvpsspgq rvrltegegs
      301 emqltdldpl srgqetsgkg letpslnikr dflgfmdids algevpqlkq evserpsfci
      361 tgnsaevpwr iidgsktcfl lragfslpil slgnsfedgs hvtsplnpne nfnvvikeep
      421 lddyeyelge cpegvtvkqe etdeetdvys nsdddpilek qlkrhnkadn leadhpsskw
      481 qpnspsgvak akmfkldagk mpvvylepca vtkstvkvse lpdnmlstsw kdrsslltel
      541 dylpayiens netgfglgre sendlgshsp dtrvvqkyps lkeaqwkypd vsgsvntekl
      601 ldgskssved sflgkedlgr kktmlkisaa prtvnanqna ppnvpgkrgr prklklskag
      661 rppkntgrsl tstkntltgp gstfpdvkpd ledvdgvlfv sfeskealdi havdgtnees
      721 cslqasaand pgcrarishl ekeliedlka lrhkqvihpg lqevglklns vdptmsidlk
      781 ylgvqlplap atsfpfwnlt ganpaspdag fpfvsrtgkt ndftkikgwr gkfhsasasr
      841 neggnsegpl knrsafcsdk ldeylenegk lmetsmgfss naptspvvyq lptkstsyvr
      901 tldsvlkkqs tvspstsysl kphsvpsvsr kaksqnkqat fsgrtkssyk silpypvspk
      961 qkhthmipgd kttknssstt senrvnnliv ptldentfpk qislrqahqq qqqqqqqqgs
     1021 rppglsksqv klmdledcal wegkprtyit eeradvsltt lltaqaslkt kpihtiirkr
     1081 appcnndfcr lgcvcsslal ekrqpahcrr pdcmfgctcl krkvvlvkgg sktkhfqrks
     1141 ahrdpvfydt lgeeqkeege egvkeeeeql kekkkrkkle yticetepeq pvrhyplwvk
     1201 vegevdpepv yiptpsviep mrplllpqpe vssttvkgkl ltgikparay tpkpnpvire
     1261 edkdpvylyf esmmtcarvr vyerkkeeer dpspspspsf qqqgschssp encsvkepas
     1321 eqqplkpltc dleddsdksq ekswkascne gesastsyvh qrspggptkl ieiisdcnwe
     1381 edrnkilsil sqhinsnmpq slkvgsfiie lasqrksrge knppvyssrv kismpscqdq
     1441 ddmaeksgse tpdgplspgk mddvspvqtd aldsvrerlh ggkglpfyag lspagklvay
     1501 krkpssstsg liqvngksyp qaklllgqmg alhpanrlaa yitgrlrpsv ldlstlstvi
     1561 skvasnakva asrkprtllp stsnskmass sgtttnrpgk nlkafvpakr piaarpspgg
     1621 vftqfvmskv galqqkipgv stpqpltgpq kfsirpspvm vvtpvvssep vqvcssvtaa
     1681 vttttpqvfl esvpaviptt alsdvgtket tyssgattag vvevtetnts tlvtptqsta
     1741 tlnlikttgi ttpvasvafp kslvasppti tlpvastast sivvvttaas ssmvttptss
     1801 lssvpiilsg idgsppvsqr penapqipva ppqvspntvk ragprlllip vqqgsptlrp
     1861 vpntqlqghr mvlqpvrsps gmnlfrhpng qivqllplhq lrgsnnqpnl qpvmfrnpgs
     1921 vmgirlptps kpsetppssa spsafsvvnp viqavgsspa mnvitqapsl lssgtnfvsq
     1981 sgtltlrisp pepqsftskt asetkltyss ggqpvgtasl iplqsgsfal lqlpgqkpvp
     2041 ssilqhvasl qmkkesqnad qkdetsflkr eqetkkvlqs ggeavepetn mikqnsgaav
     2101 seetlndsle dggdhldees lleegpaavk psehvystgs hagedykdve eeygvrnrns
     2161 skekltvlev ktisgrasnm tvqsvnnvql kklgdvkveq qkgldnpeek snefpiiske
     2221 eskvefsgsr vveqqsnpkp eakekgcgep lekdsirerw rkhlkgplaq kyvrtsqegk
     2281 netneqlike tktckensdv fqqehsisdl lgksgttena rilktecdsw ssisspttfs
     2341 ivprraakgs rgdghfqghl llsgeqikpk qektggrsst dftvleleed deedenektd
     2401 dsideivdvv sdyqseevdd veknncieyi eddeeqvdie tveelpeein vahmkstavh
     2461 teilkqpcrt pvsadekate rsrkaaqvpl klkpdywsek lqkeaeafay yrrthtaner
     2521 rrrgemrdlf eklkitlgll hsskvsksli ltrafseiqg ltdqadklig qknlltrkrn
     2581 ilirkvssls gkteevvlkk leyiyakqqa leaqkrkkkm gsdefdvspr tsrqqegasa
     2641 ssvdlgqmfi nnrkgkplil srkkdqaten tspsntphts anivmtpqgq lltlkgplfs
     2701 gpvvtvspal leadlkpqva ssavaqsekd dlfmmprivn vtslateggl vdmsgskyph
     2761 evpdgkppdh lkntvrsedn scedlgriss rgnhrdvrma lgtaqvylsh kdsgfpqivd
     2821 vssmqeaqef lpkkisgdtr gsqhkwkese srrerlktke spfhklkmkd lkdssiemel
     2881 rkvasaieea aldpsellts mededdtdet ltsllneiaf lnqqlnddsv slaelpssld
     2941 tefpgdarra fisklppgnr atfqvghlgt glkelpdvqg esdsvsplll hleeddfsen
     3001 ekqlaepase pdvlkivids eikeslishr kagdegksts sipaepetvs sppilhmkgg
     3061 vennstdtlw rpmpklaplg lkvantssdt dgqslkvmpc lapvaakvgs vghkmnltgn
     3121 dqecreskvm ptlapvvakl gntgaspssa gk
//
LOCUS       XP_061013477            3152 aa            linear   MAM 02-DEC-2023
DEFINITION  MAX gene-associated protein isoform X1 [Dama dama].
ACCESSION   XP_061013477
VERSION     XP_061013477.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157494.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3152
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3152
                     /product="MAX gene-associated protein isoform X1"
                     /calculated_mol_wt=344944
     Region          75..260
                     /region_name="T-box_MGA-like"
                     /note="DNA-binding domain of MAX gene-associated protein
                     and related T-box proteins; cd20195"
                     /db_xref="CDD:410321"
     Site            order(102..103,136,180,183,196..197,237..240,245,248..249,
                     252..258)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410321"
     Region          1078..1119
                     /region_name="MGA_dom"
                     /note="MGA, conserved domain; pfam16059"
                     /db_xref="CDD:464998"
     Region          <1554..1855
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          1714..>2065
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          2512..2576
                     /region_name="bHLHzip_MGA"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in MAX gene-associated protein (MGA) and similar
                     proteins; cd18911"
                     /db_xref="CDD:381481"
     Site            order(2512,2514..2516,2518..2520,2522..2523,2527,
                     2546..2547)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381481"
     Site            order(2526,2529..2530,2532..2533,2536..2538,2548,
                     2551..2552,2555,2557..2559,2561..2562,2564..2565,2568,
                     2571..2572,2575..2576)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381481"
     CDS             1..3152
                     /gene="MGA"
                     /coded_by="XM_061157494.1:1410..10868"
                     /db_xref="GeneID:133066427"
ORIGIN      
        1 meekqqiila nqdggtvpga aptffvilkq pgngktdqgi lvtnrdacal assvsspgks
       61 kgkiclpadc tvggitvtld nnsmwnefyh rstemiltkq grrmfpycry witgldsnmk
      121 yilvmdispv dnhrykwngr wwepsgkaep hvlgrvfihp espstghywm hqpvsfyklk
      181 ltnntldqeg hiilhsmhry lprlhlvpae kateviqlng pgvhtftfpq teffavtayq
      241 niqitqlkid ynpfakgfrd dglnskpqrd gkqknssdqe gnsvpsspgq rvrltegegs
      301 emqltdldpl srgqetsgkg letpslnikr dflgfmdids algevpqlkq evserpsfci
      361 tgnsaevpwr iidgsktcfl lragfslpil slgnsfedgs hvtsplnpne nfnvvikeep
      421 lddyeyelge cpegvtvkqe etdeetdvys nsdddpilek qlkrhnkadn leadhpsskw
      481 qpnspsgvak akmfkldagk mpvvylepca vtkstvkvse lpdnmlstsw kdrsslltel
      541 dylpayiens netgfglgre sendlgshsp dtrvvqkyps lkeaqwkypd vsgsvntekl
      601 ldgskssved sflgkedlgr kktmlkisaa prtvnanqna ppnvpgkrgr prklklskag
      661 rppkntgrsl tstkntltgp gstfpdvkpd ledvdgvlfv sfeskealdi havdgtnees
      721 cslqasaand pgcrarishl ekeliedlka lrhkqvihpg lqevglklns vdptmsidlk
      781 ylgvqlplap atsfpfwnlt ganpaspdag fpfvsrtgkt ndftkikgwr gkfhsasasr
      841 neggnsegpl knrsafcsdk ldeylenegk lmetsmgfss naptspvvyq lptkstsyvr
      901 tldsvlkkqs tvspstsysl kphsvpsvsr kaksqnkqat fsgrtkssyk silpypvspk
      961 qkhthmipgd kttknssstt senrvnnliv ptldentfpk qislrqahqq qqqqqqqqgs
     1021 rppglsksqv klmdledcal wegkprtyit eeradvsltt lltaqaslkt kpihtiirkr
     1081 appcnndfcr lgcvcsslal ekrqpahcrr pdcmfgctcl krkvvlvkgg sktkhfqrks
     1141 ahrdpvfydt lgeeqkeege egvkeeeeql kekkkrkkle yticetepeq pvrhyplwvk
     1201 vegevdpepv yiptpsviep mrplllpqpe vssttvkgkl ltgikparay tpkpnpvire
     1261 edkdpvylyf esmmtcarvr vyerkkeeer dpspspspsf qqqgschssp encsvkepas
     1321 eqqplkpltc dleddsdksq ekswkascne gesastsyvh qrspggptkl ieiisdcnwe
     1381 edrnkilsil sqhinsnmpq slkvgsfiie lasqrksrge knppvyssrv kismpscqdq
     1441 ddmaeksgse tpdgplspgk mddvspvqtd aldsvrerlh ggkglpfyag lspagklvay
     1501 krkpssstsg liqvngksyp qaklllgqmg alhpanrlaa yitgrlrpsv ldlstlstvi
     1561 skvasnakva asrkprtllp stsnskmass sgtttnrpgk nlkafvpakr piaarpspgg
     1621 vftqfvmskv galqqkipgv stpqpltgpq kfsirpspvm vvtpvvssep vqvcssvtaa
     1681 vttttpqvfl esvpaviptt alsdvgtket tyssgattag vvevtetnts tlvtptqsta
     1741 tlnlikttgi ttpvasvafp kslvasppti tlpvastast sivvvttaas ssmvttptss
     1801 lssvpiilsg idgsppvsqr penapqipva ppqvspntvk ragprlllip vqqgsptlrp
     1861 vpntqlqghr mvlqpvrsps gmnlfrhpng qivqllplhq lrgsnnqpnl qpvmfrnpgs
     1921 vmgirlptps kpsetppssa spsafsvvnp viqavgsspa mnvitqapsl lssgtnfvsq
     1981 sgtltlrisp pepqsftskt asetkltyss ggqpvgtasl iplqsgsfal lqlpgqkpvp
     2041 ssilqhvasl qmkkesqnad qkdetsflkr eqetkkvlqs ggeavepetn mikqnsgaav
     2101 seetlndsle dggdhldees lleegpaavk psehvystgs hagedykdve eeygvrnrns
     2161 skekltvlev ktisgrasnm tvqsvnnvql kklgdvkveq qkgldnpeek snefpiiske
     2221 eskvefsgsr vveqqsnpkp eakekgcgep lekdsirerw rkhlkgplaq kyvrtsqegk
     2281 netneqlike tktckensdv fqqehsisdl lgksgttena rilktecdsw ssisspttfs
     2341 ivprraakgs rgdghfqghl llsgeqikpk qektggrsst dftvleleed deedenektd
     2401 dsideivdvv sdyqseevdd veknncieyi eddeeqvdie tveelpeein vahmkstavh
     2461 teilkqpcrt pvsadekate rsrkaaqvpl klkpdywsek lqkeaeafay yrrthtaner
     2521 rrrgemrdlf eklkitlgll hsskvsksli ltrafseiqg ltdqadklig qknlltrkrn
     2581 ilirkvssls gkteevvlkk leyiyakqqa leaqkrkkkm gsdefdvspr tsrqqegasa
     2641 ssvdlgqmfi nnrkgkplil srkkdqaten tspsntphts anivmtpqgq lltlkgplfs
     2701 gpvvtvspal leadlkpqva ssavaqsekd dlfmmprivn vtslateggl vdmsgskyph
     2761 evpdgkppdh lkntvrsedn scedlgriss rgnhrdvrma lgtaqvylsh kdsgfpqivd
     2821 vssmqeaqef lpkkisgdtr gsqhkwkese srrerlktke spfhklkmkd lkdssiemel
     2881 rkvasaieea aldpsellts mededdtdet ltsllneiaf lnqqlnddsv slaelpssld
     2941 tefpgdarra fisklppgnr atfqvghlgt glkelpdvqg esdsvsplll hleeddfsen
     3001 ekqlaepase pdvlkivids eikeslishr kagdegksts sipaepetvs sppilhmkgg
     3061 vennstdtlw rpmpklaplg lkvantssdt dgqslkvmpc lapvaakvgs vghkmnltgn
     3121 dqecreskvm ptlapvvakl gntgaspssa gk
//
LOCUS       XP_061013478            3152 aa            linear   MAM 02-DEC-2023
DEFINITION  MAX gene-associated protein isoform X1 [Dama dama].
ACCESSION   XP_061013478
VERSION     XP_061013478.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157495.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3152
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3152
                     /product="MAX gene-associated protein isoform X1"
                     /calculated_mol_wt=344944
     Region          75..260
                     /region_name="T-box_MGA-like"
                     /note="DNA-binding domain of MAX gene-associated protein
                     and related T-box proteins; cd20195"
                     /db_xref="CDD:410321"
     Site            order(102..103,136,180,183,196..197,237..240,245,248..249,
                     252..258)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410321"
     Region          1078..1119
                     /region_name="MGA_dom"
                     /note="MGA, conserved domain; pfam16059"
                     /db_xref="CDD:464998"
     Region          <1554..1855
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          1714..>2065
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          2512..2576
                     /region_name="bHLHzip_MGA"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in MAX gene-associated protein (MGA) and similar
                     proteins; cd18911"
                     /db_xref="CDD:381481"
     Site            order(2512,2514..2516,2518..2520,2522..2523,2527,
                     2546..2547)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381481"
     Site            order(2526,2529..2530,2532..2533,2536..2538,2548,
                     2551..2552,2555,2557..2559,2561..2562,2564..2565,2568,
                     2571..2572,2575..2576)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381481"
     CDS             1..3152
                     /gene="MGA"
                     /coded_by="XM_061157495.1:346..9804"
                     /db_xref="GeneID:133066427"
ORIGIN      
        1 meekqqiila nqdggtvpga aptffvilkq pgngktdqgi lvtnrdacal assvsspgks
       61 kgkiclpadc tvggitvtld nnsmwnefyh rstemiltkq grrmfpycry witgldsnmk
      121 yilvmdispv dnhrykwngr wwepsgkaep hvlgrvfihp espstghywm hqpvsfyklk
      181 ltnntldqeg hiilhsmhry lprlhlvpae kateviqlng pgvhtftfpq teffavtayq
      241 niqitqlkid ynpfakgfrd dglnskpqrd gkqknssdqe gnsvpsspgq rvrltegegs
      301 emqltdldpl srgqetsgkg letpslnikr dflgfmdids algevpqlkq evserpsfci
      361 tgnsaevpwr iidgsktcfl lragfslpil slgnsfedgs hvtsplnpne nfnvvikeep
      421 lddyeyelge cpegvtvkqe etdeetdvys nsdddpilek qlkrhnkadn leadhpsskw
      481 qpnspsgvak akmfkldagk mpvvylepca vtkstvkvse lpdnmlstsw kdrsslltel
      541 dylpayiens netgfglgre sendlgshsp dtrvvqkyps lkeaqwkypd vsgsvntekl
      601 ldgskssved sflgkedlgr kktmlkisaa prtvnanqna ppnvpgkrgr prklklskag
      661 rppkntgrsl tstkntltgp gstfpdvkpd ledvdgvlfv sfeskealdi havdgtnees
      721 cslqasaand pgcrarishl ekeliedlka lrhkqvihpg lqevglklns vdptmsidlk
      781 ylgvqlplap atsfpfwnlt ganpaspdag fpfvsrtgkt ndftkikgwr gkfhsasasr
      841 neggnsegpl knrsafcsdk ldeylenegk lmetsmgfss naptspvvyq lptkstsyvr
      901 tldsvlkkqs tvspstsysl kphsvpsvsr kaksqnkqat fsgrtkssyk silpypvspk
      961 qkhthmipgd kttknssstt senrvnnliv ptldentfpk qislrqahqq qqqqqqqqgs
     1021 rppglsksqv klmdledcal wegkprtyit eeradvsltt lltaqaslkt kpihtiirkr
     1081 appcnndfcr lgcvcsslal ekrqpahcrr pdcmfgctcl krkvvlvkgg sktkhfqrks
     1141 ahrdpvfydt lgeeqkeege egvkeeeeql kekkkrkkle yticetepeq pvrhyplwvk
     1201 vegevdpepv yiptpsviep mrplllpqpe vssttvkgkl ltgikparay tpkpnpvire
     1261 edkdpvylyf esmmtcarvr vyerkkeeer dpspspspsf qqqgschssp encsvkepas
     1321 eqqplkpltc dleddsdksq ekswkascne gesastsyvh qrspggptkl ieiisdcnwe
     1381 edrnkilsil sqhinsnmpq slkvgsfiie lasqrksrge knppvyssrv kismpscqdq
     1441 ddmaeksgse tpdgplspgk mddvspvqtd aldsvrerlh ggkglpfyag lspagklvay
     1501 krkpssstsg liqvngksyp qaklllgqmg alhpanrlaa yitgrlrpsv ldlstlstvi
     1561 skvasnakva asrkprtllp stsnskmass sgtttnrpgk nlkafvpakr piaarpspgg
     1621 vftqfvmskv galqqkipgv stpqpltgpq kfsirpspvm vvtpvvssep vqvcssvtaa
     1681 vttttpqvfl esvpaviptt alsdvgtket tyssgattag vvevtetnts tlvtptqsta
     1741 tlnlikttgi ttpvasvafp kslvasppti tlpvastast sivvvttaas ssmvttptss
     1801 lssvpiilsg idgsppvsqr penapqipva ppqvspntvk ragprlllip vqqgsptlrp
     1861 vpntqlqghr mvlqpvrsps gmnlfrhpng qivqllplhq lrgsnnqpnl qpvmfrnpgs
     1921 vmgirlptps kpsetppssa spsafsvvnp viqavgsspa mnvitqapsl lssgtnfvsq
     1981 sgtltlrisp pepqsftskt asetkltyss ggqpvgtasl iplqsgsfal lqlpgqkpvp
     2041 ssilqhvasl qmkkesqnad qkdetsflkr eqetkkvlqs ggeavepetn mikqnsgaav
     2101 seetlndsle dggdhldees lleegpaavk psehvystgs hagedykdve eeygvrnrns
     2161 skekltvlev ktisgrasnm tvqsvnnvql kklgdvkveq qkgldnpeek snefpiiske
     2221 eskvefsgsr vveqqsnpkp eakekgcgep lekdsirerw rkhlkgplaq kyvrtsqegk
     2281 netneqlike tktckensdv fqqehsisdl lgksgttena rilktecdsw ssisspttfs
     2341 ivprraakgs rgdghfqghl llsgeqikpk qektggrsst dftvleleed deedenektd
     2401 dsideivdvv sdyqseevdd veknncieyi eddeeqvdie tveelpeein vahmkstavh
     2461 teilkqpcrt pvsadekate rsrkaaqvpl klkpdywsek lqkeaeafay yrrthtaner
     2521 rrrgemrdlf eklkitlgll hsskvsksli ltrafseiqg ltdqadklig qknlltrkrn
     2581 ilirkvssls gkteevvlkk leyiyakqqa leaqkrkkkm gsdefdvspr tsrqqegasa
     2641 ssvdlgqmfi nnrkgkplil srkkdqaten tspsntphts anivmtpqgq lltlkgplfs
     2701 gpvvtvspal leadlkpqva ssavaqsekd dlfmmprivn vtslateggl vdmsgskyph
     2761 evpdgkppdh lkntvrsedn scedlgriss rgnhrdvrma lgtaqvylsh kdsgfpqivd
     2821 vssmqeaqef lpkkisgdtr gsqhkwkese srrerlktke spfhklkmkd lkdssiemel
     2881 rkvasaieea aldpsellts mededdtdet ltsllneiaf lnqqlnddsv slaelpssld
     2941 tefpgdarra fisklppgnr atfqvghlgt glkelpdvqg esdsvsplll hleeddfsen
     3001 ekqlaepase pdvlkivids eikeslishr kagdegksts sipaepetvs sppilhmkgg
     3061 vennstdtlw rpmpklaplg lkvantssdt dgqslkvmpc lapvaakvgs vghkmnltgn
     3121 dqecreskvm ptlapvvakl gntgaspssa gk
//
LOCUS       XP_061013479            3152 aa            linear   MAM 02-DEC-2023
DEFINITION  MAX gene-associated protein isoform X1 [Dama dama].
ACCESSION   XP_061013479
VERSION     XP_061013479.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157496.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3152
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3152
                     /product="MAX gene-associated protein isoform X1"
                     /calculated_mol_wt=344944
     Region          75..260
                     /region_name="T-box_MGA-like"
                     /note="DNA-binding domain of MAX gene-associated protein
                     and related T-box proteins; cd20195"
                     /db_xref="CDD:410321"
     Site            order(102..103,136,180,183,196..197,237..240,245,248..249,
                     252..258)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410321"
     Region          1078..1119
                     /region_name="MGA_dom"
                     /note="MGA, conserved domain; pfam16059"
                     /db_xref="CDD:464998"
     Region          <1554..1855
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          1714..>2065
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          2512..2576
                     /region_name="bHLHzip_MGA"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in MAX gene-associated protein (MGA) and similar
                     proteins; cd18911"
                     /db_xref="CDD:381481"
     Site            order(2512,2514..2516,2518..2520,2522..2523,2527,
                     2546..2547)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381481"
     Site            order(2526,2529..2530,2532..2533,2536..2538,2548,
                     2551..2552,2555,2557..2559,2561..2562,2564..2565,2568,
                     2571..2572,2575..2576)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381481"
     CDS             1..3152
                     /gene="MGA"
                     /coded_by="XM_061157496.1:144..9602"
                     /db_xref="GeneID:133066427"
ORIGIN      
        1 meekqqiila nqdggtvpga aptffvilkq pgngktdqgi lvtnrdacal assvsspgks
       61 kgkiclpadc tvggitvtld nnsmwnefyh rstemiltkq grrmfpycry witgldsnmk
      121 yilvmdispv dnhrykwngr wwepsgkaep hvlgrvfihp espstghywm hqpvsfyklk
      181 ltnntldqeg hiilhsmhry lprlhlvpae kateviqlng pgvhtftfpq teffavtayq
      241 niqitqlkid ynpfakgfrd dglnskpqrd gkqknssdqe gnsvpsspgq rvrltegegs
      301 emqltdldpl srgqetsgkg letpslnikr dflgfmdids algevpqlkq evserpsfci
      361 tgnsaevpwr iidgsktcfl lragfslpil slgnsfedgs hvtsplnpne nfnvvikeep
      421 lddyeyelge cpegvtvkqe etdeetdvys nsdddpilek qlkrhnkadn leadhpsskw
      481 qpnspsgvak akmfkldagk mpvvylepca vtkstvkvse lpdnmlstsw kdrsslltel
      541 dylpayiens netgfglgre sendlgshsp dtrvvqkyps lkeaqwkypd vsgsvntekl
      601 ldgskssved sflgkedlgr kktmlkisaa prtvnanqna ppnvpgkrgr prklklskag
      661 rppkntgrsl tstkntltgp gstfpdvkpd ledvdgvlfv sfeskealdi havdgtnees
      721 cslqasaand pgcrarishl ekeliedlka lrhkqvihpg lqevglklns vdptmsidlk
      781 ylgvqlplap atsfpfwnlt ganpaspdag fpfvsrtgkt ndftkikgwr gkfhsasasr
      841 neggnsegpl knrsafcsdk ldeylenegk lmetsmgfss naptspvvyq lptkstsyvr
      901 tldsvlkkqs tvspstsysl kphsvpsvsr kaksqnkqat fsgrtkssyk silpypvspk
      961 qkhthmipgd kttknssstt senrvnnliv ptldentfpk qislrqahqq qqqqqqqqgs
     1021 rppglsksqv klmdledcal wegkprtyit eeradvsltt lltaqaslkt kpihtiirkr
     1081 appcnndfcr lgcvcsslal ekrqpahcrr pdcmfgctcl krkvvlvkgg sktkhfqrks
     1141 ahrdpvfydt lgeeqkeege egvkeeeeql kekkkrkkle yticetepeq pvrhyplwvk
     1201 vegevdpepv yiptpsviep mrplllpqpe vssttvkgkl ltgikparay tpkpnpvire
     1261 edkdpvylyf esmmtcarvr vyerkkeeer dpspspspsf qqqgschssp encsvkepas
     1321 eqqplkpltc dleddsdksq ekswkascne gesastsyvh qrspggptkl ieiisdcnwe
     1381 edrnkilsil sqhinsnmpq slkvgsfiie lasqrksrge knppvyssrv kismpscqdq
     1441 ddmaeksgse tpdgplspgk mddvspvqtd aldsvrerlh ggkglpfyag lspagklvay
     1501 krkpssstsg liqvngksyp qaklllgqmg alhpanrlaa yitgrlrpsv ldlstlstvi
     1561 skvasnakva asrkprtllp stsnskmass sgtttnrpgk nlkafvpakr piaarpspgg
     1621 vftqfvmskv galqqkipgv stpqpltgpq kfsirpspvm vvtpvvssep vqvcssvtaa
     1681 vttttpqvfl esvpaviptt alsdvgtket tyssgattag vvevtetnts tlvtptqsta
     1741 tlnlikttgi ttpvasvafp kslvasppti tlpvastast sivvvttaas ssmvttptss
     1801 lssvpiilsg idgsppvsqr penapqipva ppqvspntvk ragprlllip vqqgsptlrp
     1861 vpntqlqghr mvlqpvrsps gmnlfrhpng qivqllplhq lrgsnnqpnl qpvmfrnpgs
     1921 vmgirlptps kpsetppssa spsafsvvnp viqavgsspa mnvitqapsl lssgtnfvsq
     1981 sgtltlrisp pepqsftskt asetkltyss ggqpvgtasl iplqsgsfal lqlpgqkpvp
     2041 ssilqhvasl qmkkesqnad qkdetsflkr eqetkkvlqs ggeavepetn mikqnsgaav
     2101 seetlndsle dggdhldees lleegpaavk psehvystgs hagedykdve eeygvrnrns
     2161 skekltvlev ktisgrasnm tvqsvnnvql kklgdvkveq qkgldnpeek snefpiiske
     2221 eskvefsgsr vveqqsnpkp eakekgcgep lekdsirerw rkhlkgplaq kyvrtsqegk
     2281 netneqlike tktckensdv fqqehsisdl lgksgttena rilktecdsw ssisspttfs
     2341 ivprraakgs rgdghfqghl llsgeqikpk qektggrsst dftvleleed deedenektd
     2401 dsideivdvv sdyqseevdd veknncieyi eddeeqvdie tveelpeein vahmkstavh
     2461 teilkqpcrt pvsadekate rsrkaaqvpl klkpdywsek lqkeaeafay yrrthtaner
     2521 rrrgemrdlf eklkitlgll hsskvsksli ltrafseiqg ltdqadklig qknlltrkrn
     2581 ilirkvssls gkteevvlkk leyiyakqqa leaqkrkkkm gsdefdvspr tsrqqegasa
     2641 ssvdlgqmfi nnrkgkplil srkkdqaten tspsntphts anivmtpqgq lltlkgplfs
     2701 gpvvtvspal leadlkpqva ssavaqsekd dlfmmprivn vtslateggl vdmsgskyph
     2761 evpdgkppdh lkntvrsedn scedlgriss rgnhrdvrma lgtaqvylsh kdsgfpqivd
     2821 vssmqeaqef lpkkisgdtr gsqhkwkese srrerlktke spfhklkmkd lkdssiemel
     2881 rkvasaieea aldpsellts mededdtdet ltsllneiaf lnqqlnddsv slaelpssld
     2941 tefpgdarra fisklppgnr atfqvghlgt glkelpdvqg esdsvsplll hleeddfsen
     3001 ekqlaepase pdvlkivids eikeslishr kagdegksts sipaepetvs sppilhmkgg
     3061 vennstdtlw rpmpklaplg lkvantssdt dgqslkvmpc lapvaakvgs vghkmnltgn
     3121 dqecreskvm ptlapvvakl gntgaspssa gk
//
LOCUS       XP_061013480            3152 aa            linear   MAM 02-DEC-2023
DEFINITION  MAX gene-associated protein isoform X1 [Dama dama].
ACCESSION   XP_061013480
VERSION     XP_061013480.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157497.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3152
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3152
                     /product="MAX gene-associated protein isoform X1"
                     /calculated_mol_wt=344944
     Region          75..260
                     /region_name="T-box_MGA-like"
                     /note="DNA-binding domain of MAX gene-associated protein
                     and related T-box proteins; cd20195"
                     /db_xref="CDD:410321"
     Site            order(102..103,136,180,183,196..197,237..240,245,248..249,
                     252..258)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410321"
     Region          1078..1119
                     /region_name="MGA_dom"
                     /note="MGA, conserved domain; pfam16059"
                     /db_xref="CDD:464998"
     Region          <1554..1855
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          1714..>2065
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          2512..2576
                     /region_name="bHLHzip_MGA"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in MAX gene-associated protein (MGA) and similar
                     proteins; cd18911"
                     /db_xref="CDD:381481"
     Site            order(2512,2514..2516,2518..2520,2522..2523,2527,
                     2546..2547)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381481"
     Site            order(2526,2529..2530,2532..2533,2536..2538,2548,
                     2551..2552,2555,2557..2559,2561..2562,2564..2565,2568,
                     2571..2572,2575..2576)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381481"
     CDS             1..3152
                     /gene="MGA"
                     /coded_by="XM_061157497.1:127..9585"
                     /db_xref="GeneID:133066427"
ORIGIN      
        1 meekqqiila nqdggtvpga aptffvilkq pgngktdqgi lvtnrdacal assvsspgks
       61 kgkiclpadc tvggitvtld nnsmwnefyh rstemiltkq grrmfpycry witgldsnmk
      121 yilvmdispv dnhrykwngr wwepsgkaep hvlgrvfihp espstghywm hqpvsfyklk
      181 ltnntldqeg hiilhsmhry lprlhlvpae kateviqlng pgvhtftfpq teffavtayq
      241 niqitqlkid ynpfakgfrd dglnskpqrd gkqknssdqe gnsvpsspgq rvrltegegs
      301 emqltdldpl srgqetsgkg letpslnikr dflgfmdids algevpqlkq evserpsfci
      361 tgnsaevpwr iidgsktcfl lragfslpil slgnsfedgs hvtsplnpne nfnvvikeep
      421 lddyeyelge cpegvtvkqe etdeetdvys nsdddpilek qlkrhnkadn leadhpsskw
      481 qpnspsgvak akmfkldagk mpvvylepca vtkstvkvse lpdnmlstsw kdrsslltel
      541 dylpayiens netgfglgre sendlgshsp dtrvvqkyps lkeaqwkypd vsgsvntekl
      601 ldgskssved sflgkedlgr kktmlkisaa prtvnanqna ppnvpgkrgr prklklskag
      661 rppkntgrsl tstkntltgp gstfpdvkpd ledvdgvlfv sfeskealdi havdgtnees
      721 cslqasaand pgcrarishl ekeliedlka lrhkqvihpg lqevglklns vdptmsidlk
      781 ylgvqlplap atsfpfwnlt ganpaspdag fpfvsrtgkt ndftkikgwr gkfhsasasr
      841 neggnsegpl knrsafcsdk ldeylenegk lmetsmgfss naptspvvyq lptkstsyvr
      901 tldsvlkkqs tvspstsysl kphsvpsvsr kaksqnkqat fsgrtkssyk silpypvspk
      961 qkhthmipgd kttknssstt senrvnnliv ptldentfpk qislrqahqq qqqqqqqqgs
     1021 rppglsksqv klmdledcal wegkprtyit eeradvsltt lltaqaslkt kpihtiirkr
     1081 appcnndfcr lgcvcsslal ekrqpahcrr pdcmfgctcl krkvvlvkgg sktkhfqrks
     1141 ahrdpvfydt lgeeqkeege egvkeeeeql kekkkrkkle yticetepeq pvrhyplwvk
     1201 vegevdpepv yiptpsviep mrplllpqpe vssttvkgkl ltgikparay tpkpnpvire
     1261 edkdpvylyf esmmtcarvr vyerkkeeer dpspspspsf qqqgschssp encsvkepas
     1321 eqqplkpltc dleddsdksq ekswkascne gesastsyvh qrspggptkl ieiisdcnwe
     1381 edrnkilsil sqhinsnmpq slkvgsfiie lasqrksrge knppvyssrv kismpscqdq
     1441 ddmaeksgse tpdgplspgk mddvspvqtd aldsvrerlh ggkglpfyag lspagklvay
     1501 krkpssstsg liqvngksyp qaklllgqmg alhpanrlaa yitgrlrpsv ldlstlstvi
     1561 skvasnakva asrkprtllp stsnskmass sgtttnrpgk nlkafvpakr piaarpspgg
     1621 vftqfvmskv galqqkipgv stpqpltgpq kfsirpspvm vvtpvvssep vqvcssvtaa
     1681 vttttpqvfl esvpaviptt alsdvgtket tyssgattag vvevtetnts tlvtptqsta
     1741 tlnlikttgi ttpvasvafp kslvasppti tlpvastast sivvvttaas ssmvttptss
     1801 lssvpiilsg idgsppvsqr penapqipva ppqvspntvk ragprlllip vqqgsptlrp
     1861 vpntqlqghr mvlqpvrsps gmnlfrhpng qivqllplhq lrgsnnqpnl qpvmfrnpgs
     1921 vmgirlptps kpsetppssa spsafsvvnp viqavgsspa mnvitqapsl lssgtnfvsq
     1981 sgtltlrisp pepqsftskt asetkltyss ggqpvgtasl iplqsgsfal lqlpgqkpvp
     2041 ssilqhvasl qmkkesqnad qkdetsflkr eqetkkvlqs ggeavepetn mikqnsgaav
     2101 seetlndsle dggdhldees lleegpaavk psehvystgs hagedykdve eeygvrnrns
     2161 skekltvlev ktisgrasnm tvqsvnnvql kklgdvkveq qkgldnpeek snefpiiske
     2221 eskvefsgsr vveqqsnpkp eakekgcgep lekdsirerw rkhlkgplaq kyvrtsqegk
     2281 netneqlike tktckensdv fqqehsisdl lgksgttena rilktecdsw ssisspttfs
     2341 ivprraakgs rgdghfqghl llsgeqikpk qektggrsst dftvleleed deedenektd
     2401 dsideivdvv sdyqseevdd veknncieyi eddeeqvdie tveelpeein vahmkstavh
     2461 teilkqpcrt pvsadekate rsrkaaqvpl klkpdywsek lqkeaeafay yrrthtaner
     2521 rrrgemrdlf eklkitlgll hsskvsksli ltrafseiqg ltdqadklig qknlltrkrn
     2581 ilirkvssls gkteevvlkk leyiyakqqa leaqkrkkkm gsdefdvspr tsrqqegasa
     2641 ssvdlgqmfi nnrkgkplil srkkdqaten tspsntphts anivmtpqgq lltlkgplfs
     2701 gpvvtvspal leadlkpqva ssavaqsekd dlfmmprivn vtslateggl vdmsgskyph
     2761 evpdgkppdh lkntvrsedn scedlgriss rgnhrdvrma lgtaqvylsh kdsgfpqivd
     2821 vssmqeaqef lpkkisgdtr gsqhkwkese srrerlktke spfhklkmkd lkdssiemel
     2881 rkvasaieea aldpsellts mededdtdet ltsllneiaf lnqqlnddsv slaelpssld
     2941 tefpgdarra fisklppgnr atfqvghlgt glkelpdvqg esdsvsplll hleeddfsen
     3001 ekqlaepase pdvlkivids eikeslishr kagdegksts sipaepetvs sppilhmkgg
     3061 vennstdtlw rpmpklaplg lkvantssdt dgqslkvmpc lapvaakvgs vghkmnltgn
     3121 dqecreskvm ptlapvvakl gntgaspssa gk
//
LOCUS       XP_061013481            3152 aa            linear   MAM 02-DEC-2023
DEFINITION  MAX gene-associated protein isoform X1 [Dama dama].
ACCESSION   XP_061013481
VERSION     XP_061013481.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157498.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3152
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3152
                     /product="MAX gene-associated protein isoform X1"
                     /calculated_mol_wt=344944
     Region          75..260
                     /region_name="T-box_MGA-like"
                     /note="DNA-binding domain of MAX gene-associated protein
                     and related T-box proteins; cd20195"
                     /db_xref="CDD:410321"
     Site            order(102..103,136,180,183,196..197,237..240,245,248..249,
                     252..258)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410321"
     Region          1078..1119
                     /region_name="MGA_dom"
                     /note="MGA, conserved domain; pfam16059"
                     /db_xref="CDD:464998"
     Region          <1554..1855
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          1714..>2065
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          2512..2576
                     /region_name="bHLHzip_MGA"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in MAX gene-associated protein (MGA) and similar
                     proteins; cd18911"
                     /db_xref="CDD:381481"
     Site            order(2512,2514..2516,2518..2520,2522..2523,2527,
                     2546..2547)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381481"
     Site            order(2526,2529..2530,2532..2533,2536..2538,2548,
                     2551..2552,2555,2557..2559,2561..2562,2564..2565,2568,
                     2571..2572,2575..2576)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381481"
     CDS             1..3152
                     /gene="MGA"
                     /coded_by="XM_061157498.1:88..9546"
                     /db_xref="GeneID:133066427"
ORIGIN      
        1 meekqqiila nqdggtvpga aptffvilkq pgngktdqgi lvtnrdacal assvsspgks
       61 kgkiclpadc tvggitvtld nnsmwnefyh rstemiltkq grrmfpycry witgldsnmk
      121 yilvmdispv dnhrykwngr wwepsgkaep hvlgrvfihp espstghywm hqpvsfyklk
      181 ltnntldqeg hiilhsmhry lprlhlvpae kateviqlng pgvhtftfpq teffavtayq
      241 niqitqlkid ynpfakgfrd dglnskpqrd gkqknssdqe gnsvpsspgq rvrltegegs
      301 emqltdldpl srgqetsgkg letpslnikr dflgfmdids algevpqlkq evserpsfci
      361 tgnsaevpwr iidgsktcfl lragfslpil slgnsfedgs hvtsplnpne nfnvvikeep
      421 lddyeyelge cpegvtvkqe etdeetdvys nsdddpilek qlkrhnkadn leadhpsskw
      481 qpnspsgvak akmfkldagk mpvvylepca vtkstvkvse lpdnmlstsw kdrsslltel
      541 dylpayiens netgfglgre sendlgshsp dtrvvqkyps lkeaqwkypd vsgsvntekl
      601 ldgskssved sflgkedlgr kktmlkisaa prtvnanqna ppnvpgkrgr prklklskag
      661 rppkntgrsl tstkntltgp gstfpdvkpd ledvdgvlfv sfeskealdi havdgtnees
      721 cslqasaand pgcrarishl ekeliedlka lrhkqvihpg lqevglklns vdptmsidlk
      781 ylgvqlplap atsfpfwnlt ganpaspdag fpfvsrtgkt ndftkikgwr gkfhsasasr
      841 neggnsegpl knrsafcsdk ldeylenegk lmetsmgfss naptspvvyq lptkstsyvr
      901 tldsvlkkqs tvspstsysl kphsvpsvsr kaksqnkqat fsgrtkssyk silpypvspk
      961 qkhthmipgd kttknssstt senrvnnliv ptldentfpk qislrqahqq qqqqqqqqgs
     1021 rppglsksqv klmdledcal wegkprtyit eeradvsltt lltaqaslkt kpihtiirkr
     1081 appcnndfcr lgcvcsslal ekrqpahcrr pdcmfgctcl krkvvlvkgg sktkhfqrks
     1141 ahrdpvfydt lgeeqkeege egvkeeeeql kekkkrkkle yticetepeq pvrhyplwvk
     1201 vegevdpepv yiptpsviep mrplllpqpe vssttvkgkl ltgikparay tpkpnpvire
     1261 edkdpvylyf esmmtcarvr vyerkkeeer dpspspspsf qqqgschssp encsvkepas
     1321 eqqplkpltc dleddsdksq ekswkascne gesastsyvh qrspggptkl ieiisdcnwe
     1381 edrnkilsil sqhinsnmpq slkvgsfiie lasqrksrge knppvyssrv kismpscqdq
     1441 ddmaeksgse tpdgplspgk mddvspvqtd aldsvrerlh ggkglpfyag lspagklvay
     1501 krkpssstsg liqvngksyp qaklllgqmg alhpanrlaa yitgrlrpsv ldlstlstvi
     1561 skvasnakva asrkprtllp stsnskmass sgtttnrpgk nlkafvpakr piaarpspgg
     1621 vftqfvmskv galqqkipgv stpqpltgpq kfsirpspvm vvtpvvssep vqvcssvtaa
     1681 vttttpqvfl esvpaviptt alsdvgtket tyssgattag vvevtetnts tlvtptqsta
     1741 tlnlikttgi ttpvasvafp kslvasppti tlpvastast sivvvttaas ssmvttptss
     1801 lssvpiilsg idgsppvsqr penapqipva ppqvspntvk ragprlllip vqqgsptlrp
     1861 vpntqlqghr mvlqpvrsps gmnlfrhpng qivqllplhq lrgsnnqpnl qpvmfrnpgs
     1921 vmgirlptps kpsetppssa spsafsvvnp viqavgsspa mnvitqapsl lssgtnfvsq
     1981 sgtltlrisp pepqsftskt asetkltyss ggqpvgtasl iplqsgsfal lqlpgqkpvp
     2041 ssilqhvasl qmkkesqnad qkdetsflkr eqetkkvlqs ggeavepetn mikqnsgaav
     2101 seetlndsle dggdhldees lleegpaavk psehvystgs hagedykdve eeygvrnrns
     2161 skekltvlev ktisgrasnm tvqsvnnvql kklgdvkveq qkgldnpeek snefpiiske
     2221 eskvefsgsr vveqqsnpkp eakekgcgep lekdsirerw rkhlkgplaq kyvrtsqegk
     2281 netneqlike tktckensdv fqqehsisdl lgksgttena rilktecdsw ssisspttfs
     2341 ivprraakgs rgdghfqghl llsgeqikpk qektggrsst dftvleleed deedenektd
     2401 dsideivdvv sdyqseevdd veknncieyi eddeeqvdie tveelpeein vahmkstavh
     2461 teilkqpcrt pvsadekate rsrkaaqvpl klkpdywsek lqkeaeafay yrrthtaner
     2521 rrrgemrdlf eklkitlgll hsskvsksli ltrafseiqg ltdqadklig qknlltrkrn
     2581 ilirkvssls gkteevvlkk leyiyakqqa leaqkrkkkm gsdefdvspr tsrqqegasa
     2641 ssvdlgqmfi nnrkgkplil srkkdqaten tspsntphts anivmtpqgq lltlkgplfs
     2701 gpvvtvspal leadlkpqva ssavaqsekd dlfmmprivn vtslateggl vdmsgskyph
     2761 evpdgkppdh lkntvrsedn scedlgriss rgnhrdvrma lgtaqvylsh kdsgfpqivd
     2821 vssmqeaqef lpkkisgdtr gsqhkwkese srrerlktke spfhklkmkd lkdssiemel
     2881 rkvasaieea aldpsellts mededdtdet ltsllneiaf lnqqlnddsv slaelpssld
     2941 tefpgdarra fisklppgnr atfqvghlgt glkelpdvqg esdsvsplll hleeddfsen
     3001 ekqlaepase pdvlkivids eikeslishr kagdegksts sipaepetvs sppilhmkgg
     3061 vennstdtlw rpmpklaplg lkvantssdt dgqslkvmpc lapvaakvgs vghkmnltgn
     3121 dqecreskvm ptlapvvakl gntgaspssa gk
//
LOCUS       XP_061013482            3116 aa            linear   MAM 02-DEC-2023
DEFINITION  MAX gene-associated protein isoform X2 [Dama dama].
ACCESSION   XP_061013482
VERSION     XP_061013482.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157499.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3116
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3116
                     /product="MAX gene-associated protein isoform X2"
                     /calculated_mol_wt=340995
     Region          75..260
                     /region_name="T-box_MGA-like"
                     /note="DNA-binding domain of MAX gene-associated protein
                     and related T-box proteins; cd20195"
                     /db_xref="CDD:410321"
     Site            order(102..103,136,180,183,196..197,237..240,245,248..249,
                     252..258)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410321"
     Region          1042..1083
                     /region_name="MGA_dom"
                     /note="MGA, conserved domain; pfam16059"
                     /db_xref="CDD:464998"
     Region          <1518..1819
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          1678..>2029
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          2476..2540
                     /region_name="bHLHzip_MGA"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in MAX gene-associated protein (MGA) and similar
                     proteins; cd18911"
                     /db_xref="CDD:381481"
     Site            order(2476,2478..2480,2482..2484,2486..2487,2491,
                     2510..2511)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381481"
     Site            order(2490,2493..2494,2496..2497,2500..2502,2512,
                     2515..2516,2519,2521..2523,2525..2526,2528..2529,2532,
                     2535..2536,2539..2540)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381481"
     CDS             1..3116
                     /gene="MGA"
                     /coded_by="XM_061157499.1:171..9521"
                     /db_xref="GeneID:133066427"
ORIGIN      
        1 meekqqiila nqdggtvpga aptffvilkq pgngktdqgi lvtnrdacal assvsspgks
       61 kgkiclpadc tvggitvtld nnsmwnefyh rstemiltkq grrmfpycry witgldsnmk
      121 yilvmdispv dnhrykwngr wwepsgkaep hvlgrvfihp espstghywm hqpvsfyklk
      181 ltnntldqeg hiilhsmhry lprlhlvpae kateviqlng pgvhtftfpq teffavtayq
      241 niqitqlkid ynpfakgfrd dglnskpqrd gkqknssdqe gnsvpsspgq rvrltegegs
      301 emqltdldpl srgqetsgkg letpslnikr dflgfmdids algevpqlkq evseslgnsf
      361 edgshvtspl npnenfnvvi keeplddyey elgecpegvt vkqeetdeet dvysnsdddp
      421 ilekqlkrhn kadnleadhp sskwqpnsps gvakakmfkl dagkmpvvyl epcavtkstv
      481 kvselpdnml stswkdrssl lteldylpay iensnetgfg lgresendlg shspdtrvvq
      541 kypslkeaqw kypdvsgsvn teklldgsks svedsflgke dlgrkktmlk isaaprtvna
      601 nqnappnvpg krgrprklkl skagrppknt grsltstknt ltgpgstfpd vkpdledvdg
      661 vlfvsfeske aldihavdgt neescslqas aandpgcrar ishlekelie dlkalrhkqv
      721 ihpglqevgl klnsvdptms idlkylgvql plapatsfpf wnltganpas pdagfpfvsr
      781 tgktndftki kgwrgkfhsa sasrneggns egplknrsaf csdkldeyle negklmetsm
      841 gfssnaptsp vvyqlptkst syvrtldsvl kkqstvspst syslkphsvp svsrkaksqn
      901 kqatfsgrtk ssyksilpyp vspkqkhthm ipgdkttkns ssttsenrvn nlivptlden
      961 tfpkqislrq ahqqqqqqqq qqgsrppgls ksqvklmdle dcalwegkpr tyiteeradv
     1021 slttlltaqa slktkpihti irkrappcnn dfcrlgcvcs slalekrqpa hcrrpdcmfg
     1081 ctclkrkvvl vkggsktkhf qrksahrdpv fydtlgeeqk eegeegvkee eeqlkekkkr
     1141 kkleyticet epeqpvrhyp lwvkvegevd pepvyiptps viepmrplll pqpevssttv
     1201 kgklltgikp araytpkpnp vireedkdpv ylyfesmmtc arvrvyerkk eeerdpspsp
     1261 spsfqqqgsc hsspencsvk epaseqqplk pltcdledds dksqekswka scnegesast
     1321 syvhqrspgg ptklieiisd cnweedrnki lsilsqhins nmpqslkvgs fiielasqrk
     1381 srgeknppvy ssrvkismps cqdqddmaek sgsetpdgpl spgkmddvsp vqtdaldsvr
     1441 erlhggkglp fyaglspagk lvaykrkpss stsgliqvng ksypqaklll gqmgalhpan
     1501 rlaayitgrl rpsvldlstl stviskvasn akvaasrkpr tllpstsnsk masssgtttn
     1561 rpgknlkafv pakrpiaarp spggvftqfv mskvgalqqk ipgvstpqpl tgpqkfsirp
     1621 spvmvvtpvv ssepvqvcss vtaavttttp qvflesvpav ipttalsdvg tkettyssga
     1681 ttagvvevte tntstlvtpt qstatlnlik ttgittpvas vafpkslvas pptitlpvas
     1741 tastsivvvt taasssmvtt ptsslssvpi ilsgidgspp vsqrpenapq ipvappqvsp
     1801 ntvkragprl llipvqqgsp tlrpvpntql qghrmvlqpv rspsgmnlfr hpngqivqll
     1861 plhqlrgsnn qpnlqpvmfr npgsvmgirl ptpskpsetp pssaspsafs vvnpviqavg
     1921 sspamnvitq apsllssgtn fvsqsgtltl risppepqsf tsktasetkl tyssggqpvg
     1981 tasliplqsg sfallqlpgq kpvpssilqh vaslqmkkes qnadqkdets flkreqetkk
     2041 vlqsggeave petnmikqns gaavseetln dsledggdhl deeslleegp aavkpsehvy
     2101 stgshagedy kdveeeygvr nrnsskeklt vlevktisgr asnmtvqsvn nvqlkklgdv
     2161 kveqqkgldn peeksnefpi iskeeskvef sgsrvveqqs npkpeakekg cgeplekdsi
     2221 rerwrkhlkg plaqkyvrts qegknetneq liketktcke nsdvfqqehs isdllgksgt
     2281 tenarilkte cdswssissp ttfsivprra akgsrgdghf qghlllsgeq ikpkqektgg
     2341 rsstdftvle leeddeeden ektddsidei vdvvsdyqse evddveknnc ieyieddeeq
     2401 vdietveelp eeinvahmks tavhteilkq pcrtpvsade katersrkaa qvplklkpdy
     2461 wseklqkeae afayyrrtht anerrrrgem rdlfeklkit lgllhsskvs ksliltrafs
     2521 eiqgltdqad kligqknllt rkrnilirkv sslsgkteev vlkkleyiya kqqaleaqkr
     2581 kkkmgsdefd vsprtsrqqe gasassvdlg qmfinnrkgk plilsrkkdq atentspsnt
     2641 phtsanivmt pqgqlltlkg plfsgpvvtv spalleadlk pqvassavaq sekddlfmmp
     2701 rivnvtslat egglvdmsgs kyphevpdgk ppdhlkntvr sednscedlg rissrgnhrd
     2761 vrmalgtaqv ylshkdsgfp qivdvssmqe aqeflpkkis gdtrgsqhkw kesesrrerl
     2821 ktkespfhkl kmkdlkdssi emelrkvasa ieeaaldpse lltsmededd tdetltslln
     2881 eiaflnqqln ddsvslaelp ssldtefpgd arrafisklp pgnratfqvg hlgtglkelp
     2941 dvqgesdsvs plllhleedd fsenekqlae pasepdvlki vidseikesl ishrkagdeg
     3001 kstssipaep etvssppilh mkggvennst dtlwrpmpkl aplglkvant ssdtdgqslk
     3061 vmpclapvaa kvgsvghkmn ltgndqecre skvmptlapv vaklgntgas pssagk
//
LOCUS       XP_061013483            3103 aa            linear   MAM 02-DEC-2023
DEFINITION  MAX gene-associated protein isoform X3 [Dama dama].
ACCESSION   XP_061013483
VERSION     XP_061013483.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157500.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3103
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3103
                     /product="MAX gene-associated protein isoform X3"
                     /calculated_mol_wt=339740
     Region          75..260
                     /region_name="T-box_MGA-like"
                     /note="DNA-binding domain of MAX gene-associated protein
                     and related T-box proteins; cd20195"
                     /db_xref="CDD:410321"
     Site            order(102..103,136,180,183,196..197,237..240,245,248..249,
                     252..258)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410321"
     Region          1078..1119
                     /region_name="MGA_dom"
                     /note="MGA, conserved domain; pfam16059"
                     /db_xref="CDD:464998"
     Region          <1499..1806
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          1665..>2016
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          2463..2527
                     /region_name="bHLHzip_MGA"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in MAX gene-associated protein (MGA) and similar
                     proteins; cd18911"
                     /db_xref="CDD:381481"
     Site            order(2463,2465..2467,2469..2471,2473..2474,2478,
                     2497..2498)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381481"
     Site            order(2477,2480..2481,2483..2484,2487..2489,2499,
                     2502..2503,2506,2508..2510,2512..2513,2515..2516,2519,
                     2522..2523,2526..2527)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381481"
     CDS             1..3103
                     /gene="MGA"
                     /coded_by="XM_061157500.1:171..9482"
                     /db_xref="GeneID:133066427"
ORIGIN      
        1 meekqqiila nqdggtvpga aptffvilkq pgngktdqgi lvtnrdacal assvsspgks
       61 kgkiclpadc tvggitvtld nnsmwnefyh rstemiltkq grrmfpycry witgldsnmk
      121 yilvmdispv dnhrykwngr wwepsgkaep hvlgrvfihp espstghywm hqpvsfyklk
      181 ltnntldqeg hiilhsmhry lprlhlvpae kateviqlng pgvhtftfpq teffavtayq
      241 niqitqlkid ynpfakgfrd dglnskpqrd gkqknssdqe gnsvpsspgq rvrltegegs
      301 emqltdldpl srgqetsgkg letpslnikr dflgfmdids algevpqlkq evserpsfci
      361 tgnsaevpwr iidgsktcfl lragfslpil slgnsfedgs hvtsplnpne nfnvvikeep
      421 lddyeyelge cpegvtvkqe etdeetdvys nsdddpilek qlkrhnkadn leadhpsskw
      481 qpnspsgvak akmfkldagk mpvvylepca vtkstvkvse lpdnmlstsw kdrsslltel
      541 dylpayiens netgfglgre sendlgshsp dtrvvqkyps lkeaqwkypd vsgsvntekl
      601 ldgskssved sflgkedlgr kktmlkisaa prtvnanqna ppnvpgkrgr prklklskag
      661 rppkntgrsl tstkntltgp gstfpdvkpd ledvdgvlfv sfeskealdi havdgtnees
      721 cslqasaand pgcrarishl ekeliedlka lrhkqvihpg lqevglklns vdptmsidlk
      781 ylgvqlplap atsfpfwnlt ganpaspdag fpfvsrtgkt ndftkikgwr gkfhsasasr
      841 neggnsegpl knrsafcsdk ldeylenegk lmetsmgfss naptspvvyq lptkstsyvr
      901 tldsvlkkqs tvspstsysl kphsvpsvsr kaksqnkqat fsgrtkssyk silpypvspk
      961 qkhthmipgd kttknssstt senrvnnliv ptldentfpk qislrqahqq qqqqqqqqgs
     1021 rppglsksqv klmdledcal wegkprtyit eeradvsltt lltaqaslkt kpihtiirkr
     1081 appcnndfcr lgcvcsslal ekrqpahcrr pdcmfgctcl krkvvlvkgg sktkhfqrks
     1141 ahrdpvfydt lgeeqkeege egvkeeeeql kekkkrkkle yticetepeq pvrhyplwvk
     1201 vegevdpepv yiptpsviep mrplllpqpe vssttvkgkl ltgikparay tpkpnpvire
     1261 edkdpvylyf esmmtcarvr vyerkkeeer dpspspspsf qqqgschssp encsvkepas
     1321 eqqplkpltc dleddsdksq ekswkascne gesastsyvh qrspggptkl ieiisdcnwe
     1381 edrnkilsil sqhinsnmpq slkvgsfiie lasqrksrge knppvyssrv kismpscqdq
     1441 ddmaeksgse tpdgplspgk mddvspvqtd aldsvrerlh ggkglpfyag lspagklvay
     1501 krkpssstsg liqvasnakv aasrkprtll pstsnskmas ssgtttnrpg knlkafvpak
     1561 rpiaarpspg gvftqfvmsk vgalqqkipg vstpqpltgp qkfsirpspv mvvtpvvsse
     1621 pvqvcssvta avttttpqvf lesvpavipt talsdvgtke ttyssgatta gvvevtetnt
     1681 stlvtptqst atlnlikttg ittpvasvaf pkslvasppt itlpvastas tsivvvttaa
     1741 sssmvttpts slssvpiils gidgsppvsq rpenapqipv appqvspntv kragprllli
     1801 pvqqgsptlr pvpntqlqgh rmvlqpvrsp sgmnlfrhpn gqivqllplh qlrgsnnqpn
     1861 lqpvmfrnpg svmgirlptp skpsetppss aspsafsvvn pviqavgssp amnvitqaps
     1921 llssgtnfvs qsgtltlris ppepqsftsk tasetkltys sggqpvgtas liplqsgsfa
     1981 llqlpgqkpv pssilqhvas lqmkkesqna dqkdetsflk reqetkkvlq sggeavepet
     2041 nmikqnsgaa vseetlndsl edggdhldee slleegpaav kpsehvystg shagedykdv
     2101 eeeygvrnrn sskekltvle vktisgrasn mtvqsvnnvq lkklgdvkve qqkgldnpee
     2161 ksnefpiisk eeskvefsgs rvveqqsnpk peakekgcge plekdsirer wrkhlkgpla
     2221 qkyvrtsqeg knetneqlik etktckensd vfqqehsisd llgksgtten arilktecds
     2281 wssisspttf sivprraakg srgdghfqgh lllsgeqikp kqektggrss tdftvlelee
     2341 ddeedenekt ddsideivdv vsdyqseevd dveknnciey ieddeeqvdi etveelpeei
     2401 nvahmkstav hteilkqpcr tpvsadekat ersrkaaqvp lklkpdywse klqkeaeafa
     2461 yyrrthtane rrrrgemrdl feklkitlgl lhsskvsksl iltrafseiq gltdqadkli
     2521 gqknlltrkr nilirkvssl sgkteevvlk kleyiyakqq aleaqkrkkk mgsdefdvsp
     2581 rtsrqqegas assvdlgqmf innrkgkpli lsrkkdqate ntspsntpht sanivmtpqg
     2641 qlltlkgplf sgpvvtvspa lleadlkpqv assavaqsek ddlfmmpriv nvtslategg
     2701 lvdmsgskyp hevpdgkppd hlkntvrsed nscedlgris srgnhrdvrm algtaqvyls
     2761 hkdsgfpqiv dvssmqeaqe flpkkisgdt rgsqhkwkes esrrerlktk espfhklkmk
     2821 dlkdssieme lrkvasaiee aaldpsellt smededdtde tltsllneia flnqqlndds
     2881 vslaelpssl dtefpgdarr afisklppgn ratfqvghlg tglkelpdvq gesdsvspll
     2941 lhleeddfse nekqlaepas epdvlkivid seikeslish rkagdegkst ssipaepetv
     3001 ssppilhmkg gvennstdtl wrpmpklapl glkvantssd tdgqslkvmp clapvaakvg
     3061 svghkmnltg ndqecreskv mptlapvvak lgntgaspss agk
//
LOCUS       XP_061013484            3067 aa            linear   MAM 02-DEC-2023
DEFINITION  MAX gene-associated protein isoform X4 [Dama dama].
ACCESSION   XP_061013484
VERSION     XP_061013484.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157501.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3067
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3067
                     /product="MAX gene-associated protein isoform X4"
                     /calculated_mol_wt=335792
     Region          75..260
                     /region_name="T-box_MGA-like"
                     /note="DNA-binding domain of MAX gene-associated protein
                     and related T-box proteins; cd20195"
                     /db_xref="CDD:410321"
     Site            order(102..103,136,180,183,196..197,237..240,245,248..249,
                     252..258)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410321"
     Region          1042..1083
                     /region_name="MGA_dom"
                     /note="MGA, conserved domain; pfam16059"
                     /db_xref="CDD:464998"
     Region          <1463..1770
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          1629..>1980
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          2427..2491
                     /region_name="bHLHzip_MGA"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in MAX gene-associated protein (MGA) and similar
                     proteins; cd18911"
                     /db_xref="CDD:381481"
     Site            order(2427,2429..2431,2433..2435,2437..2438,2442,
                     2461..2462)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381481"
     Site            order(2441,2444..2445,2447..2448,2451..2453,2463,
                     2466..2467,2470,2472..2474,2476..2477,2479..2480,2483,
                     2486..2487,2490..2491)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381481"
     CDS             1..3067
                     /gene="MGA"
                     /coded_by="XM_061157501.1:171..9374"
                     /db_xref="GeneID:133066427"
ORIGIN      
        1 meekqqiila nqdggtvpga aptffvilkq pgngktdqgi lvtnrdacal assvsspgks
       61 kgkiclpadc tvggitvtld nnsmwnefyh rstemiltkq grrmfpycry witgldsnmk
      121 yilvmdispv dnhrykwngr wwepsgkaep hvlgrvfihp espstghywm hqpvsfyklk
      181 ltnntldqeg hiilhsmhry lprlhlvpae kateviqlng pgvhtftfpq teffavtayq
      241 niqitqlkid ynpfakgfrd dglnskpqrd gkqknssdqe gnsvpsspgq rvrltegegs
      301 emqltdldpl srgqetsgkg letpslnikr dflgfmdids algevpqlkq evseslgnsf
      361 edgshvtspl npnenfnvvi keeplddyey elgecpegvt vkqeetdeet dvysnsdddp
      421 ilekqlkrhn kadnleadhp sskwqpnsps gvakakmfkl dagkmpvvyl epcavtkstv
      481 kvselpdnml stswkdrssl lteldylpay iensnetgfg lgresendlg shspdtrvvq
      541 kypslkeaqw kypdvsgsvn teklldgsks svedsflgke dlgrkktmlk isaaprtvna
      601 nqnappnvpg krgrprklkl skagrppknt grsltstknt ltgpgstfpd vkpdledvdg
      661 vlfvsfeske aldihavdgt neescslqas aandpgcrar ishlekelie dlkalrhkqv
      721 ihpglqevgl klnsvdptms idlkylgvql plapatsfpf wnltganpas pdagfpfvsr
      781 tgktndftki kgwrgkfhsa sasrneggns egplknrsaf csdkldeyle negklmetsm
      841 gfssnaptsp vvyqlptkst syvrtldsvl kkqstvspst syslkphsvp svsrkaksqn
      901 kqatfsgrtk ssyksilpyp vspkqkhthm ipgdkttkns ssttsenrvn nlivptlden
      961 tfpkqislrq ahqqqqqqqq qqgsrppgls ksqvklmdle dcalwegkpr tyiteeradv
     1021 slttlltaqa slktkpihti irkrappcnn dfcrlgcvcs slalekrqpa hcrrpdcmfg
     1081 ctclkrkvvl vkggsktkhf qrksahrdpv fydtlgeeqk eegeegvkee eeqlkekkkr
     1141 kkleyticet epeqpvrhyp lwvkvegevd pepvyiptps viepmrplll pqpevssttv
     1201 kgklltgikp araytpkpnp vireedkdpv ylyfesmmtc arvrvyerkk eeerdpspsp
     1261 spsfqqqgsc hsspencsvk epaseqqplk pltcdledds dksqekswka scnegesast
     1321 syvhqrspgg ptklieiisd cnweedrnki lsilsqhins nmpqslkvgs fiielasqrk
     1381 srgeknppvy ssrvkismps cqdqddmaek sgsetpdgpl spgkmddvsp vqtdaldsvr
     1441 erlhggkglp fyaglspagk lvaykrkpss stsgliqvas nakvaasrkp rtllpstsns
     1501 kmasssgttt nrpgknlkaf vpakrpiaar pspggvftqf vmskvgalqq kipgvstpqp
     1561 ltgpqkfsir pspvmvvtpv vssepvqvcs svtaavtttt pqvflesvpa vipttalsdv
     1621 gtkettyssg attagvvevt etntstlvtp tqstatlnli kttgittpva svafpkslva
     1681 spptitlpva stastsivvv ttaasssmvt tptsslssvp iilsgidgsp pvsqrpenap
     1741 qipvappqvs pntvkragpr lllipvqqgs ptlrpvpntq lqghrmvlqp vrspsgmnlf
     1801 rhpngqivql lplhqlrgsn nqpnlqpvmf rnpgsvmgir lptpskpset ppssaspsaf
     1861 svvnpviqav gsspamnvit qapsllssgt nfvsqsgtlt lrisppepqs ftsktasetk
     1921 ltyssggqpv gtasliplqs gsfallqlpg qkpvpssilq hvaslqmkke sqnadqkdet
     1981 sflkreqetk kvlqsggeav epetnmikqn sgaavseetl ndsledggdh ldeeslleeg
     2041 paavkpsehv ystgshaged ykdveeeygv rnrnsskekl tvlevktisg rasnmtvqsv
     2101 nnvqlkklgd vkveqqkgld npeeksnefp iiskeeskve fsgsrvveqq snpkpeakek
     2161 gcgeplekds irerwrkhlk gplaqkyvrt sqegknetne qliketktck ensdvfqqeh
     2221 sisdllgksg ttenarilkt ecdswssiss pttfsivprr aakgsrgdgh fqghlllsge
     2281 qikpkqektg grsstdftvl eleeddeede nektddside ivdvvsdyqs eevddveknn
     2341 cieyieddee qvdietveel peeinvahmk stavhteilk qpcrtpvsad ekatersrka
     2401 aqvplklkpd ywseklqkea eafayyrrth tanerrrrge mrdlfeklki tlgllhsskv
     2461 sksliltraf seiqgltdqa dkligqknll trkrnilirk vsslsgktee vvlkkleyiy
     2521 akqqaleaqk rkkkmgsdef dvsprtsrqq egasassvdl gqmfinnrkg kplilsrkkd
     2581 qatentspsn tphtsanivm tpqgqlltlk gplfsgpvvt vspalleadl kpqvassava
     2641 qsekddlfmm privnvtsla tegglvdmsg skyphevpdg kppdhlkntv rsednscedl
     2701 grissrgnhr dvrmalgtaq vylshkdsgf pqivdvssmq eaqeflpkki sgdtrgsqhk
     2761 wkesesrrer lktkespfhk lkmkdlkdss iemelrkvas aieeaaldps elltsmeded
     2821 dtdetltsll neiaflnqql nddsvslael pssldtefpg darrafiskl ppgnratfqv
     2881 ghlgtglkel pdvqgesdsv splllhleed dfsenekqla epasepdvlk ividseikes
     2941 lishrkagde gkstssipae petvssppil hmkggvenns tdtlwrpmpk laplglkvan
     3001 tssdtdgqsl kvmpclapva akvgsvghkm nltgndqecr eskvmptlap vvaklgntga
     3061 spssagk
//
LOCUS       XP_061013485            3042 aa            linear   MAM 02-DEC-2023
DEFINITION  MAX gene-associated protein isoform X5 [Dama dama].
ACCESSION   XP_061013485
VERSION     XP_061013485.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157502.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3042
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3042
                     /product="MAX gene-associated protein isoform X5"
                     /calculated_mol_wt=333253
     Region          75..260
                     /region_name="T-box_MGA-like"
                     /note="DNA-binding domain of MAX gene-associated protein
                     and related T-box proteins; cd20195"
                     /db_xref="CDD:410321"
     Site            order(102..103,136,180,183,196..197,237..240,245,248..249,
                     252..258)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410321"
     Region          1078..1119
                     /region_name="MGA_dom"
                     /note="MGA, conserved domain; pfam16059"
                     /db_xref="CDD:464998"
     Region          <1444..1745
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          1604..>1955
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          2402..2466
                     /region_name="bHLHzip_MGA"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in MAX gene-associated protein (MGA) and similar
                     proteins; cd18911"
                     /db_xref="CDD:381481"
     Site            order(2402,2404..2406,2408..2410,2412..2413,2417,
                     2436..2437)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381481"
     Site            order(2416,2419..2420,2422..2423,2426..2428,2438,
                     2441..2442,2445,2447..2449,2451..2452,2454..2455,2458,
                     2461..2462,2465..2466)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381481"
     CDS             1..3042
                     /gene="MGA"
                     /coded_by="XM_061157502.1:171..9299"
                     /db_xref="GeneID:133066427"
ORIGIN      
        1 meekqqiila nqdggtvpga aptffvilkq pgngktdqgi lvtnrdacal assvsspgks
       61 kgkiclpadc tvggitvtld nnsmwnefyh rstemiltkq grrmfpycry witgldsnmk
      121 yilvmdispv dnhrykwngr wwepsgkaep hvlgrvfihp espstghywm hqpvsfyklk
      181 ltnntldqeg hiilhsmhry lprlhlvpae kateviqlng pgvhtftfpq teffavtayq
      241 niqitqlkid ynpfakgfrd dglnskpqrd gkqknssdqe gnsvpsspgq rvrltegegs
      301 emqltdldpl srgqetsgkg letpslnikr dflgfmdids algevpqlkq evserpsfci
      361 tgnsaevpwr iidgsktcfl lragfslpil slgnsfedgs hvtsplnpne nfnvvikeep
      421 lddyeyelge cpegvtvkqe etdeetdvys nsdddpilek qlkrhnkadn leadhpsskw
      481 qpnspsgvak akmfkldagk mpvvylepca vtkstvkvse lpdnmlstsw kdrsslltel
      541 dylpayiens netgfglgre sendlgshsp dtrvvqkyps lkeaqwkypd vsgsvntekl
      601 ldgskssved sflgkedlgr kktmlkisaa prtvnanqna ppnvpgkrgr prklklskag
      661 rppkntgrsl tstkntltgp gstfpdvkpd ledvdgvlfv sfeskealdi havdgtnees
      721 cslqasaand pgcrarishl ekeliedlka lrhkqvihpg lqevglklns vdptmsidlk
      781 ylgvqlplap atsfpfwnlt ganpaspdag fpfvsrtgkt ndftkikgwr gkfhsasasr
      841 neggnsegpl knrsafcsdk ldeylenegk lmetsmgfss naptspvvyq lptkstsyvr
      901 tldsvlkkqs tvspstsysl kphsvpsvsr kaksqnkqat fsgrtkssyk silpypvspk
      961 qkhthmipgd kttknssstt senrvnnliv ptldentfpk qislrqahqq qqqqqqqqgs
     1021 rppglsksqv klmdledcal wegkprtyit eeradvsltt lltaqaslkt kpihtiirkr
     1081 appcnndfcr lgcvcsslal ekrqpahcrr pdcmfgctcl krkvvlvkgg sktkhfqrks
     1141 ahrdpvfydt lgeeqkeege egvkeeeeql kekkkrkkle yticetepeq pvrhyplwvk
     1201 vegevdpepv yiptpsviep mrplllpqpe vssttvkgkl ltgikparay tpkpnpvire
     1261 edkdpvylyf esmmtcarvr vyerkkeeer dpspspspsf qqqgschssp encsvkepas
     1321 eqqplkpltc dleddsdksq ekswkascne gesastsyvh qrspggptkl ieiisdcnwe
     1381 edrnkilsil sqhinsnmpq slkvngksyp qaklllgqmg alhpanrlaa yitgrlrpsv
     1441 ldlstlstvi skvasnakva asrkprtllp stsnskmass sgtttnrpgk nlkafvpakr
     1501 piaarpspgg vftqfvmskv galqqkipgv stpqpltgpq kfsirpspvm vvtpvvssep
     1561 vqvcssvtaa vttttpqvfl esvpaviptt alsdvgtket tyssgattag vvevtetnts
     1621 tlvtptqsta tlnlikttgi ttpvasvafp kslvasppti tlpvastast sivvvttaas
     1681 ssmvttptss lssvpiilsg idgsppvsqr penapqipva ppqvspntvk ragprlllip
     1741 vqqgsptlrp vpntqlqghr mvlqpvrsps gmnlfrhpng qivqllplhq lrgsnnqpnl
     1801 qpvmfrnpgs vmgirlptps kpsetppssa spsafsvvnp viqavgsspa mnvitqapsl
     1861 lssgtnfvsq sgtltlrisp pepqsftskt asetkltyss ggqpvgtasl iplqsgsfal
     1921 lqlpgqkpvp ssilqhvasl qmkkesqnad qkdetsflkr eqetkkvlqs ggeavepetn
     1981 mikqnsgaav seetlndsle dggdhldees lleegpaavk psehvystgs hagedykdve
     2041 eeygvrnrns skekltvlev ktisgrasnm tvqsvnnvql kklgdvkveq qkgldnpeek
     2101 snefpiiske eskvefsgsr vveqqsnpkp eakekgcgep lekdsirerw rkhlkgplaq
     2161 kyvrtsqegk netneqlike tktckensdv fqqehsisdl lgksgttena rilktecdsw
     2221 ssisspttfs ivprraakgs rgdghfqghl llsgeqikpk qektggrsst dftvleleed
     2281 deedenektd dsideivdvv sdyqseevdd veknncieyi eddeeqvdie tveelpeein
     2341 vahmkstavh teilkqpcrt pvsadekate rsrkaaqvpl klkpdywsek lqkeaeafay
     2401 yrrthtaner rrrgemrdlf eklkitlgll hsskvsksli ltrafseiqg ltdqadklig
     2461 qknlltrkrn ilirkvssls gkteevvlkk leyiyakqqa leaqkrkkkm gsdefdvspr
     2521 tsrqqegasa ssvdlgqmfi nnrkgkplil srkkdqaten tspsntphts anivmtpqgq
     2581 lltlkgplfs gpvvtvspal leadlkpqva ssavaqsekd dlfmmprivn vtslateggl
     2641 vdmsgskyph evpdgkppdh lkntvrsedn scedlgriss rgnhrdvrma lgtaqvylsh
     2701 kdsgfpqivd vssmqeaqef lpkkisgdtr gsqhkwkese srrerlktke spfhklkmkd
     2761 lkdssiemel rkvasaieea aldpsellts mededdtdet ltsllneiaf lnqqlnddsv
     2821 slaelpssld tefpgdarra fisklppgnr atfqvghlgt glkelpdvqg esdsvsplll
     2881 hleeddfsen ekqlaepase pdvlkivids eikeslishr kagdegksts sipaepetvs
     2941 sppilhmkgg vennstdtlw rpmpklaplg lkvantssdt dgqslkvmpc lapvaakvgs
     3001 vghkmnltgn dqecreskvm ptlapvvakl gntgaspssa gk
//
LOCUS       XP_061013486            2993 aa            linear   MAM 02-DEC-2023
DEFINITION  MAX gene-associated protein isoform X6 [Dama dama].
ACCESSION   XP_061013486
VERSION     XP_061013486.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157503.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2993
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2993
                     /product="MAX gene-associated protein isoform X6"
                     /calculated_mol_wt=328050
     Region          75..260
                     /region_name="T-box_MGA-like"
                     /note="DNA-binding domain of MAX gene-associated protein
                     and related T-box proteins; cd20195"
                     /db_xref="CDD:410321"
     Site            order(102..103,136,180,183,196..197,237..240,245,248..249,
                     252..258)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410321"
     Region          1078..1119
                     /region_name="MGA_dom"
                     /note="MGA, conserved domain; pfam16059"
                     /db_xref="CDD:464998"
     Region          1343..1696
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          1555..>1906
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          2353..2417
                     /region_name="bHLHzip_MGA"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in MAX gene-associated protein (MGA) and similar
                     proteins; cd18911"
                     /db_xref="CDD:381481"
     Site            order(2353,2355..2357,2359..2361,2363..2364,2368,
                     2387..2388)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381481"
     Site            order(2367,2370..2371,2373..2374,2377..2379,2389,
                     2392..2393,2396,2398..2400,2402..2403,2405..2406,2409,
                     2412..2413,2416..2417)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381481"
     CDS             1..2993
                     /gene="MGA"
                     /coded_by="XM_061157503.1:171..9152"
                     /db_xref="GeneID:133066427"
ORIGIN      
        1 meekqqiila nqdggtvpga aptffvilkq pgngktdqgi lvtnrdacal assvsspgks
       61 kgkiclpadc tvggitvtld nnsmwnefyh rstemiltkq grrmfpycry witgldsnmk
      121 yilvmdispv dnhrykwngr wwepsgkaep hvlgrvfihp espstghywm hqpvsfyklk
      181 ltnntldqeg hiilhsmhry lprlhlvpae kateviqlng pgvhtftfpq teffavtayq
      241 niqitqlkid ynpfakgfrd dglnskpqrd gkqknssdqe gnsvpsspgq rvrltegegs
      301 emqltdldpl srgqetsgkg letpslnikr dflgfmdids algevpqlkq evserpsfci
      361 tgnsaevpwr iidgsktcfl lragfslpil slgnsfedgs hvtsplnpne nfnvvikeep
      421 lddyeyelge cpegvtvkqe etdeetdvys nsdddpilek qlkrhnkadn leadhpsskw
      481 qpnspsgvak akmfkldagk mpvvylepca vtkstvkvse lpdnmlstsw kdrsslltel
      541 dylpayiens netgfglgre sendlgshsp dtrvvqkyps lkeaqwkypd vsgsvntekl
      601 ldgskssved sflgkedlgr kktmlkisaa prtvnanqna ppnvpgkrgr prklklskag
      661 rppkntgrsl tstkntltgp gstfpdvkpd ledvdgvlfv sfeskealdi havdgtnees
      721 cslqasaand pgcrarishl ekeliedlka lrhkqvihpg lqevglklns vdptmsidlk
      781 ylgvqlplap atsfpfwnlt ganpaspdag fpfvsrtgkt ndftkikgwr gkfhsasasr
      841 neggnsegpl knrsafcsdk ldeylenegk lmetsmgfss naptspvvyq lptkstsyvr
      901 tldsvlkkqs tvspstsysl kphsvpsvsr kaksqnkqat fsgrtkssyk silpypvspk
      961 qkhthmipgd kttknssstt senrvnnliv ptldentfpk qislrqahqq qqqqqqqqgs
     1021 rppglsksqv klmdledcal wegkprtyit eeradvsltt lltaqaslkt kpihtiirkr
     1081 appcnndfcr lgcvcsslal ekrqpahcrr pdcmfgctcl krkvvlvkgg sktkhfqrks
     1141 ahrdpvfydt lgeeqkeege egvkeeeeql kekkkrkkle yticetepeq pvrhyplwvk
     1201 vegevdpepv yiptpsviep mrplllpqpe vssttvkgkl ltgikparay tpkpnpvire
     1261 edkdpvylyf esmmtcarvr vyerkkeeer dpspspspsf qqqgschssp encsvkepas
     1321 eqqplkpltc dleddsdksq ekswkascne gesastsyvh qrspggptkl ieiisdcnwe
     1381 edrnkilsil sqhinsnmpq slkvasnakv aasrkprtll pstsnskmas ssgtttnrpg
     1441 knlkafvpak rpiaarpspg gvftqfvmsk vgalqqkipg vstpqpltgp qkfsirpspv
     1501 mvvtpvvsse pvqvcssvta avttttpqvf lesvpavipt talsdvgtke ttyssgatta
     1561 gvvevtetnt stlvtptqst atlnlikttg ittpvasvaf pkslvasppt itlpvastas
     1621 tsivvvttaa sssmvttpts slssvpiils gidgsppvsq rpenapqipv appqvspntv
     1681 kragprllli pvqqgsptlr pvpntqlqgh rmvlqpvrsp sgmnlfrhpn gqivqllplh
     1741 qlrgsnnqpn lqpvmfrnpg svmgirlptp skpsetppss aspsafsvvn pviqavgssp
     1801 amnvitqaps llssgtnfvs qsgtltlris ppepqsftsk tasetkltys sggqpvgtas
     1861 liplqsgsfa llqlpgqkpv pssilqhvas lqmkkesqna dqkdetsflk reqetkkvlq
     1921 sggeavepet nmikqnsgaa vseetlndsl edggdhldee slleegpaav kpsehvystg
     1981 shagedykdv eeeygvrnrn sskekltvle vktisgrasn mtvqsvnnvq lkklgdvkve
     2041 qqkgldnpee ksnefpiisk eeskvefsgs rvveqqsnpk peakekgcge plekdsirer
     2101 wrkhlkgpla qkyvrtsqeg knetneqlik etktckensd vfqqehsisd llgksgtten
     2161 arilktecds wssisspttf sivprraakg srgdghfqgh lllsgeqikp kqektggrss
     2221 tdftvlelee ddeedenekt ddsideivdv vsdyqseevd dveknnciey ieddeeqvdi
     2281 etveelpeei nvahmkstav hteilkqpcr tpvsadekat ersrkaaqvp lklkpdywse
     2341 klqkeaeafa yyrrthtane rrrrgemrdl feklkitlgl lhsskvsksl iltrafseiq
     2401 gltdqadkli gqknlltrkr nilirkvssl sgkteevvlk kleyiyakqq aleaqkrkkk
     2461 mgsdefdvsp rtsrqqegas assvdlgqmf innrkgkpli lsrkkdqate ntspsntpht
     2521 sanivmtpqg qlltlkgplf sgpvvtvspa lleadlkpqv assavaqsek ddlfmmpriv
     2581 nvtslategg lvdmsgskyp hevpdgkppd hlkntvrsed nscedlgris srgnhrdvrm
     2641 algtaqvyls hkdsgfpqiv dvssmqeaqe flpkkisgdt rgsqhkwkes esrrerlktk
     2701 espfhklkmk dlkdssieme lrkvasaiee aaldpsellt smededdtde tltsllneia
     2761 flnqqlndds vslaelpssl dtefpgdarr afisklppgn ratfqvghlg tglkelpdvq
     2821 gesdsvspll lhleeddfse nekqlaepas epdvlkivid seikeslish rkagdegkst
     2881 ssipaepetv ssppilhmkg gvennstdtl wrpmpklapl glkvantssd tdgqslkvmp
     2941 clapvaakvg svghkmnltg ndqecreskv mptlapvvak lgntgaspss agk
//
LOCUS       XP_061013487            2982 aa            linear   MAM 02-DEC-2023
DEFINITION  MAX gene-associated protein isoform X7 [Dama dama].
ACCESSION   XP_061013487
VERSION     XP_061013487.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157504.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2982
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2982
                     /product="MAX gene-associated protein isoform X7"
                     /calculated_mol_wt=327806
     Region          75..260
                     /region_name="T-box_MGA-like"
                     /note="DNA-binding domain of MAX gene-associated protein
                     and related T-box proteins; cd20195"
                     /db_xref="CDD:410321"
     Site            order(102..103,136,180,183,196..197,237..240,245,248..249,
                     252..258)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410321"
     Region          1078..1119
                     /region_name="MGA_dom"
                     /note="MGA, conserved domain; pfam16059"
                     /db_xref="CDD:464998"
     Region          <1504..1685
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          1606..>1895
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          2342..2406
                     /region_name="bHLHzip_MGA"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in MAX gene-associated protein (MGA) and similar
                     proteins; cd18911"
                     /db_xref="CDD:381481"
     Site            order(2342,2344..2346,2348..2350,2352..2353,2357,
                     2376..2377)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381481"
     Site            order(2356,2359..2360,2362..2363,2366..2368,2378,
                     2381..2382,2385,2387..2389,2391..2392,2394..2395,2398,
                     2401..2402,2405..2406)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381481"
     CDS             1..2982
                     /gene="MGA"
                     /coded_by="XM_061157504.1:171..9119"
                     /db_xref="GeneID:133066427"
ORIGIN      
        1 meekqqiila nqdggtvpga aptffvilkq pgngktdqgi lvtnrdacal assvsspgks
       61 kgkiclpadc tvggitvtld nnsmwnefyh rstemiltkq grrmfpycry witgldsnmk
      121 yilvmdispv dnhrykwngr wwepsgkaep hvlgrvfihp espstghywm hqpvsfyklk
      181 ltnntldqeg hiilhsmhry lprlhlvpae kateviqlng pgvhtftfpq teffavtayq
      241 niqitqlkid ynpfakgfrd dglnskpqrd gkqknssdqe gnsvpsspgq rvrltegegs
      301 emqltdldpl srgqetsgkg letpslnikr dflgfmdids algevpqlkq evserpsfci
      361 tgnsaevpwr iidgsktcfl lragfslpil slgnsfedgs hvtsplnpne nfnvvikeep
      421 lddyeyelge cpegvtvkqe etdeetdvys nsdddpilek qlkrhnkadn leadhpsskw
      481 qpnspsgvak akmfkldagk mpvvylepca vtkstvkvse lpdnmlstsw kdrsslltel
      541 dylpayiens netgfglgre sendlgshsp dtrvvqkyps lkeaqwkypd vsgsvntekl
      601 ldgskssved sflgkedlgr kktmlkisaa prtvnanqna ppnvpgkrgr prklklskag
      661 rppkntgrsl tstkntltgp gstfpdvkpd ledvdgvlfv sfeskealdi havdgtnees
      721 cslqasaand pgcrarishl ekeliedlka lrhkqvihpg lqevglklns vdptmsidlk
      781 ylgvqlplap atsfpfwnlt ganpaspdag fpfvsrtgkt ndftkikgwr gkfhsasasr
      841 neggnsegpl knrsafcsdk ldeylenegk lmetsmgfss naptspvvyq lptkstsyvr
      901 tldsvlkkqs tvspstsysl kphsvpsvsr kaksqnkqat fsgrtkssyk silpypvspk
      961 qkhthmipgd kttknssstt senrvnnliv ptldentfpk qislrqahqq qqqqqqqqgs
     1021 rppglsksqv klmdledcal wegkprtyit eeradvsltt lltaqaslkt kpihtiirkr
     1081 appcnndfcr lgcvcsslal ekrqpahcrr pdcmfgctcl krkvvlvkgg sktkhfqrks
     1141 ahrdpvfydt lgeeqkeege egvkeeeeql kekkkrkkle yticetepeq pvrhyplwvk
     1201 vegevdpepv yiptpsviep mrplllpqpe vssttvkgkl ltgikparay tpkpnpvire
     1261 edkdpvylyf esmmtcarvr vyerkkeeer dpspspspsf qqqgschssp encsvkepas
     1321 eqqplkpltc dleddsdksq ekswkascne gesastsyvh qrspggptkl ieiisdcnwe
     1381 edrnkilsil sqhinsnmpq slkvgsfiie lasqrksrge knppvyssrv kismpscqdq
     1441 ddmaeksgse tpdgplspgk mddvspvqtd aldsvrerlh ggkglpfyag lspagklvay
     1501 krkpssstsg liqvngksyp qaklllgqmg alhpanrlaa yitgrlrpsv ldlstlstvi
     1561 skvasnakva asrkprtllp stsnskmass sgtttnrpgk nlkafvpakr pivvvttaas
     1621 ssmvttptss lssvpiilsg idgsppvsqr penapqipva ppqvspntvk ragprlllip
     1681 vqqgsptlrp vpntqlqghr mvlqpvrsps gmnlfrhpng qivqllplhq lrgsnnqpnl
     1741 qpvmfrnpgs vmgirlptps kpsetppssa spsafsvvnp viqavgsspa mnvitqapsl
     1801 lssgtnfvsq sgtltlrisp pepqsftskt asetkltyss ggqpvgtasl iplqsgsfal
     1861 lqlpgqkpvp ssilqhvasl qmkkesqnad qkdetsflkr eqetkkvlqs ggeavepetn
     1921 mikqnsgaav seetlndsle dggdhldees lleegpaavk psehvystgs hagedykdve
     1981 eeygvrnrns skekltvlev ktisgrasnm tvqsvnnvql kklgdvkveq qkgldnpeek
     2041 snefpiiske eskvefsgsr vveqqsnpkp eakekgcgep lekdsirerw rkhlkgplaq
     2101 kyvrtsqegk netneqlike tktckensdv fqqehsisdl lgksgttena rilktecdsw
     2161 ssisspttfs ivprraakgs rgdghfqghl llsgeqikpk qektggrsst dftvleleed
     2221 deedenektd dsideivdvv sdyqseevdd veknncieyi eddeeqvdie tveelpeein
     2281 vahmkstavh teilkqpcrt pvsadekate rsrkaaqvpl klkpdywsek lqkeaeafay
     2341 yrrthtaner rrrgemrdlf eklkitlgll hsskvsksli ltrafseiqg ltdqadklig
     2401 qknlltrkrn ilirkvssls gkteevvlkk leyiyakqqa leaqkrkkkm gsdefdvspr
     2461 tsrqqegasa ssvdlgqmfi nnrkgkplil srkkdqaten tspsntphts anivmtpqgq
     2521 lltlkgplfs gpvvtvspal leadlkpqva ssavaqsekd dlfmmprivn vtslateggl
     2581 vdmsgskyph evpdgkppdh lkntvrsedn scedlgriss rgnhrdvrma lgtaqvylsh
     2641 kdsgfpqivd vssmqeaqef lpkkisgdtr gsqhkwkese srrerlktke spfhklkmkd
     2701 lkdssiemel rkvasaieea aldpsellts mededdtdet ltsllneiaf lnqqlnddsv
     2761 slaelpssld tefpgdarra fisklppgnr atfqvghlgt glkelpdvqg esdsvsplll
     2821 hleeddfsen ekqlaepase pdvlkivids eikeslishr kagdegksts sipaepetvs
     2881 sppilhmkgg vennstdtlw rpmpklaplg lkvantssdt dgqslkvmpc lapvaakvgs
     2941 vghkmnltgn dqecreskvm ptlapvvakl gntgaspssa gk
//
LOCUS       XP_061013488            2943 aa            linear   MAM 02-DEC-2023
DEFINITION  MAX gene-associated protein isoform X8 [Dama dama].
ACCESSION   XP_061013488
VERSION     XP_061013488.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157505.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2943
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2943
                     /product="MAX gene-associated protein isoform X8"
                     /calculated_mol_wt=323996
     Region          75..260
                     /region_name="T-box_MGA-like"
                     /note="DNA-binding domain of MAX gene-associated protein
                     and related T-box proteins; cd20195"
                     /db_xref="CDD:410321"
     Site            order(102..103,136,180,183,196..197,237..240,245,248..249,
                     252..258)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410321"
     Region          1078..1119
                     /region_name="MGA_dom"
                     /note="MGA, conserved domain; pfam16059"
                     /db_xref="CDD:464998"
     Region          2303..2367
                     /region_name="bHLHzip_MGA"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in MAX gene-associated protein (MGA) and similar
                     proteins; cd18911"
                     /db_xref="CDD:381481"
     Site            order(2303,2305..2307,2309..2311,2313..2314,2318,
                     2337..2338)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381481"
     Site            order(2317,2320..2321,2323..2324,2327..2329,2339,
                     2342..2343,2346,2348..2350,2352..2353,2355..2356,2359,
                     2362..2363,2366..2367)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381481"
     CDS             1..2943
                     /gene="MGA"
                     /coded_by="XM_061157505.1:171..9002"
                     /db_xref="GeneID:133066427"
ORIGIN      
        1 meekqqiila nqdggtvpga aptffvilkq pgngktdqgi lvtnrdacal assvsspgks
       61 kgkiclpadc tvggitvtld nnsmwnefyh rstemiltkq grrmfpycry witgldsnmk
      121 yilvmdispv dnhrykwngr wwepsgkaep hvlgrvfihp espstghywm hqpvsfyklk
      181 ltnntldqeg hiilhsmhry lprlhlvpae kateviqlng pgvhtftfpq teffavtayq
      241 niqitqlkid ynpfakgfrd dglnskpqrd gkqknssdqe gnsvpsspgq rvrltegegs
      301 emqltdldpl srgqetsgkg letpslnikr dflgfmdids algevpqlkq evserpsfci
      361 tgnsaevpwr iidgsktcfl lragfslpil slgnsfedgs hvtsplnpne nfnvvikeep
      421 lddyeyelge cpegvtvkqe etdeetdvys nsdddpilek qlkrhnkadn leadhpsskw
      481 qpnspsgvak akmfkldagk mpvvylepca vtkstvkvse lpdnmlstsw kdrsslltel
      541 dylpayiens netgfglgre sendlgshsp dtrvvqkyps lkeaqwkypd vsgsvntekl
      601 ldgskssved sflgkedlgr kktmlkisaa prtvnanqna ppnvpgkrgr prklklskag
      661 rppkntgrsl tstkntltgp gstfpdvkpd ledvdgvlfv sfeskealdi havdgtnees
      721 cslqasaand pgcrarishl ekeliedlka lrhkqvihpg lqevglklns vdptmsidlk
      781 ylgvqlplap atsfpfwnlt ganpaspdag fpfvsrtgkt ndftkikgwr gkfhsasasr
      841 neggnsegpl knrsafcsdk ldeylenegk lmetsmgfss naptspvvyq lptkstsyvr
      901 tldsvlkkqs tvspstsysl kphsvpsvsr kaksqnkqat fsgrtkssyk silpypvspk
      961 qkhthmipgd kttknssstt senrvnnliv ptldentfpk qislrqahqq qqqqqqqqgs
     1021 rppglsksqv klmdledcal wegkprtyit eeradvsltt lltaqaslkt kpihtiirkr
     1081 appcnndfcr lgcvcsslal ekrqpahcrr pdcmfgctcl krkvvlvkgg sktkhfqrks
     1141 ahrdpvfydt lgeeqkeege egvkeeeeql kekkkrkkle yticetepeq pvrhyplwvk
     1201 vegevdpepv yiptpsviep mrplllpqpe vssttvkgkl ltgikparay tpkpnpvire
     1261 edkdpvylyf esmmtcarvr vyerkkeeer dpspspspsf qqqgschssp encsvkepas
     1321 eqqplkpltc dleddsdksq ekswkascne gesastsyvh qrspggptkl ieiisdcnwe
     1381 edrnkilsil sqhinsnmpq slkvgsfiie lasqrksrge knppvyssrv kismpscqdq
     1441 ddmaeksgse tpdgplspgk mddvspvqtd aldsvrerlh ggkglpfyag lspagklvay
     1501 krkpssstsg liqvngksyp qaklllgqmg alhpanrlaa yitgrlrpsv ldlstlstvi
     1561 skvasnakva asrkprtllp stsnskmass sgtttnrpgk nlkafvpakr pienapqipv
     1621 appqvspntv kragprllli pvqqgsptlr pvpntqlqgh rmvlqpvrsp sgmnlfrhpn
     1681 gqivqllplh qlrgsnnqpn lqpvmfrnpg svmgirlptp skpsetppss aspsafsvvn
     1741 pviqavgssp amnvitqaps llssgtnfvs qsgtltlris ppepqsftsk tasetkltys
     1801 sggqpvgtas liplqsgsfa llqlpgqkpv pssilqhvas lqmkkesqna dqkdetsflk
     1861 reqetkkvlq sggeavepet nmikqnsgaa vseetlndsl edggdhldee slleegpaav
     1921 kpsehvystg shagedykdv eeeygvrnrn sskekltvle vktisgrasn mtvqsvnnvq
     1981 lkklgdvkve qqkgldnpee ksnefpiisk eeskvefsgs rvveqqsnpk peakekgcge
     2041 plekdsirer wrkhlkgpla qkyvrtsqeg knetneqlik etktckensd vfqqehsisd
     2101 llgksgtten arilktecds wssisspttf sivprraakg srgdghfqgh lllsgeqikp
     2161 kqektggrss tdftvlelee ddeedenekt ddsideivdv vsdyqseevd dveknnciey
     2221 ieddeeqvdi etveelpeei nvahmkstav hteilkqpcr tpvsadekat ersrkaaqvp
     2281 lklkpdywse klqkeaeafa yyrrthtane rrrrgemrdl feklkitlgl lhsskvsksl
     2341 iltrafseiq gltdqadkli gqknlltrkr nilirkvssl sgkteevvlk kleyiyakqq
     2401 aleaqkrkkk mgsdefdvsp rtsrqqegas assvdlgqmf innrkgkpli lsrkkdqate
     2461 ntspsntpht sanivmtpqg qlltlkgplf sgpvvtvspa lleadlkpqv assavaqsek
     2521 ddlfmmpriv nvtslategg lvdmsgskyp hevpdgkppd hlkntvrsed nscedlgris
     2581 srgnhrdvrm algtaqvyls hkdsgfpqiv dvssmqeaqe flpkkisgdt rgsqhkwkes
     2641 esrrerlktk espfhklkmk dlkdssieme lrkvasaiee aaldpsellt smededdtde
     2701 tltsllneia flnqqlndds vslaelpssl dtefpgdarr afisklppgn ratfqvghlg
     2761 tglkelpdvq gesdsvspll lhleeddfse nekqlaepas epdvlkivid seikeslish
     2821 rkagdegkst ssipaepetv ssppilhmkg gvennstdtl wrpmpklapl glkvantssd
     2881 tdgqslkvmp clapvaakvg svghkmnltg ndqecreskv mptlapvvak lgntgaspss
     2941 agk
//
LOCUS       XP_061013489            2858 aa            linear   MAM 02-DEC-2023
DEFINITION  MAX gene-associated protein isoform X9 [Dama dama].
ACCESSION   XP_061013489
VERSION     XP_061013489.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157506.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2858
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2858
                     /product="MAX gene-associated protein isoform X9"
                     /calculated_mol_wt=314845
     Region          75..260
                     /region_name="T-box_MGA-like"
                     /note="DNA-binding domain of MAX gene-associated protein
                     and related T-box proteins; cd20195"
                     /db_xref="CDD:410321"
     Site            order(102..103,136,180,183,196..197,237..240,245,248..249,
                     252..258)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410321"
     Region          1042..1083
                     /region_name="MGA_dom"
                     /note="MGA, conserved domain; pfam16059"
                     /db_xref="CDD:464998"
     Region          2218..2282
                     /region_name="bHLHzip_MGA"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in MAX gene-associated protein (MGA) and similar
                     proteins; cd18911"
                     /db_xref="CDD:381481"
     Site            order(2218,2220..2222,2224..2226,2228..2229,2233,
                     2252..2253)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381481"
     Site            order(2232,2235..2236,2238..2239,2242..2244,2254,
                     2257..2258,2261,2263..2265,2267..2268,2270..2271,2274,
                     2277..2278,2281..2282)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381481"
     CDS             1..2858
                     /gene="MGA"
                     /coded_by="XM_061157506.1:171..8747"
                     /db_xref="GeneID:133066427"
ORIGIN      
        1 meekqqiila nqdggtvpga aptffvilkq pgngktdqgi lvtnrdacal assvsspgks
       61 kgkiclpadc tvggitvtld nnsmwnefyh rstemiltkq grrmfpycry witgldsnmk
      121 yilvmdispv dnhrykwngr wwepsgkaep hvlgrvfihp espstghywm hqpvsfyklk
      181 ltnntldqeg hiilhsmhry lprlhlvpae kateviqlng pgvhtftfpq teffavtayq
      241 niqitqlkid ynpfakgfrd dglnskpqrd gkqknssdqe gnsvpsspgq rvrltegegs
      301 emqltdldpl srgqetsgkg letpslnikr dflgfmdids algevpqlkq evseslgnsf
      361 edgshvtspl npnenfnvvi keeplddyey elgecpegvt vkqeetdeet dvysnsdddp
      421 ilekqlkrhn kadnleadhp sskwqpnsps gvakakmfkl dagkmpvvyl epcavtkstv
      481 kvselpdnml stswkdrssl lteldylpay iensnetgfg lgresendlg shspdtrvvq
      541 kypslkeaqw kypdvsgsvn teklldgsks svedsflgke dlgrkktmlk isaaprtvna
      601 nqnappnvpg krgrprklkl skagrppknt grsltstknt ltgpgstfpd vkpdledvdg
      661 vlfvsfeske aldihavdgt neescslqas aandpgcrar ishlekelie dlkalrhkqv
      721 ihpglqevgl klnsvdptms idlkylgvql plapatsfpf wnltganpas pdagfpfvsr
      781 tgktndftki kgwrgkfhsa sasrneggns egplknrsaf csdkldeyle negklmetsm
      841 gfssnaptsp vvyqlptkst syvrtldsvl kkqstvspst syslkphsvp svsrkaksqn
      901 kqatfsgrtk ssyksilpyp vspkqkhthm ipgdkttkns ssttsenrvn nlivptlden
      961 tfpkqislrq ahqqqqqqqq qqgsrppgls ksqvklmdle dcalwegkpr tyiteeradv
     1021 slttlltaqa slktkpihti irkrappcnn dfcrlgcvcs slalekrqpa hcrrpdcmfg
     1081 ctclkrkvvl vkggsktkhf qrksahrdpv fydtlgeeqk eegeegvkee eeqlkekkkr
     1141 kkleyticet epeqpvrhyp lwvkvegevd pepvyiptps viepmrplll pqpevssttv
     1201 kgklltgikp araytpkpnp vireedkdpv ylyfesmmtc arvrvyerkk eeerdpspsp
     1261 spsfqqqgsc hsspencsvk epaseqqplk pltcdledds dksqekswka scnegesast
     1321 syvhqrspgg ptklieiisd cnweedrnki lsilsqhins nmpqslkvgs fiielasqrk
     1381 srgeknppvy ssrvkismps cqdqddmaek sgsetpdgpl spgkmddvsp vqtdaldsvr
     1441 erlhggkglp fyaglspagk lvaykrkpss stsgliqvas nakvaasrkp rtllpstsns
     1501 kmasssgttt nrpgknlkaf vpakrpiena pqipvappqv spntvkragp rlllipvqqg
     1561 sptlrpvpnt qlqghrmvlq pvrspsgmnl frhpngqivq llplhqlrgs nnqpnlqpvm
     1621 frnpgsvmgi rlptpskpse tppssaspsa fsvvnpviqa vgsspamnvi tqapsllssg
     1681 tnfvsqsgtl tlrisppepq sftsktaset kltyssggqp vgtasliplq sgsfallqlp
     1741 gqkpvpssil qhvaslqmkk esqnadqkde tsflkreqet kkvlqsggea vepetnmikq
     1801 nsgaavseet lndsledggd hldeesllee gpaavkpseh vystgshage dykdveeeyg
     1861 vrnrnsskek ltvlevktis grasnmtvqs vnnvqlkklg dvkveqqkgl dnpeeksnef
     1921 piiskeeskv efsgsrvveq qsnpkpeake kgcgeplekd sirerwrkhl kgplaqkyvr
     1981 tsqegknetn eqliketktc kensdvfqqe hsisdllgks gttenarilk tecdswssis
     2041 spttfsivpr raakgsrgdg hfqghlllsg eqikpkqekt ggrsstdftv leleeddeed
     2101 enektddsid eivdvvsdyq seevddvekn ncieyiedde eqvdietvee lpeeinvahm
     2161 kstavhteil kqpcrtpvsa dekatersrk aaqvplklkp dywseklqke aeafayyrrt
     2221 htanerrrrg emrdlfeklk itlgllhssk vsksliltra fseiqgltdq adkligqknl
     2281 ltrkrnilir kvsslsgkte evvlkkleyi yakqqaleaq krkkkmgsde fdvsprtsrq
     2341 qegasassvd lgqmfinnrk gkplilsrkk dqatentsps ntphtsaniv mtpqgqlltl
     2401 kgplfsgpvv tvspallead lkpqvassav aqsekddlfm mprivnvtsl ategglvdms
     2461 gskyphevpd gkppdhlknt vrsednsced lgrissrgnh rdvrmalgta qvylshkdsg
     2521 fpqivdvssm qeaqeflpkk isgdtrgsqh kwkesesrre rlktkespfh klkmkdlkds
     2581 siemelrkva saieeaaldp selltsmede ddtdetltsl lneiaflnqq lnddsvslae
     2641 lpssldtefp gdarrafisk lppgnratfq vghlgtglke lpdvqgesds vsplllhlee
     2701 ddfsenekql aepasepdvl kividseike slishrkagd egkstssipa epetvssppi
     2761 lhmkggvenn stdtlwrpmp klaplglkva ntssdtdgqs lkvmpclapv aakvgsvghk
     2821 mnltgndqec reskvmptla pvvaklgntg aspssagk
//
LOCUS       XP_061013490            1597 aa            linear   MAM 02-DEC-2023
DEFINITION  MAX gene-associated protein isoform X10 [Dama dama].
ACCESSION   XP_061013490
VERSION     XP_061013490.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157507.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1597
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1597
                     /product="MAX gene-associated protein isoform X10"
                     /calculated_mol_wt=177349
     Region          75..260
                     /region_name="T-box_MGA-like"
                     /note="DNA-binding domain of MAX gene-associated protein
                     and related T-box proteins; cd20195"
                     /db_xref="CDD:410321"
     Site            order(102..103,136,180,183,196..197,237..240,245,248..249,
                     252..258)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410321"
     Region          1078..1119
                     /region_name="MGA_dom"
                     /note="MGA, conserved domain; pfam16059"
                     /db_xref="CDD:464998"
     CDS             1..1597
                     /gene="MGA"
                     /coded_by="XM_061157507.1:167..4960"
                     /db_xref="GeneID:133066427"
ORIGIN      
        1 meekqqiila nqdggtvpga aptffvilkq pgngktdqgi lvtnrdacal assvsspgks
       61 kgkiclpadc tvggitvtld nnsmwnefyh rstemiltkq grrmfpycry witgldsnmk
      121 yilvmdispv dnhrykwngr wwepsgkaep hvlgrvfihp espstghywm hqpvsfyklk
      181 ltnntldqeg hiilhsmhry lprlhlvpae kateviqlng pgvhtftfpq teffavtayq
      241 niqitqlkid ynpfakgfrd dglnskpqrd gkqknssdqe gnsvpsspgq rvrltegegs
      301 emqltdldpl srgqetsgkg letpslnikr dflgfmdids algevpqlkq evserpsfci
      361 tgnsaevpwr iidgsktcfl lragfslpil slgnsfedgs hvtsplnpne nfnvvikeep
      421 lddyeyelge cpegvtvkqe etdeetdvys nsdddpilek qlkrhnkadn leadhpsskw
      481 qpnspsgvak akmfkldagk mpvvylepca vtkstvkvse lpdnmlstsw kdrsslltel
      541 dylpayiens netgfglgre sendlgshsp dtrvvqkyps lkeaqwkypd vsgsvntekl
      601 ldgskssved sflgkedlgr kktmlkisaa prtvnanqna ppnvpgkrgr prklklskag
      661 rppkntgrsl tstkntltgp gstfpdvkpd ledvdgvlfv sfeskealdi havdgtnees
      721 cslqasaand pgcrarishl ekeliedlka lrhkqvihpg lqevglklns vdptmsidlk
      781 ylgvqlplap atsfpfwnlt ganpaspdag fpfvsrtgkt ndftkikgwr gkfhsasasr
      841 neggnsegpl knrsafcsdk ldeylenegk lmetsmgfss naptspvvyq lptkstsyvr
      901 tldsvlkkqs tvspstsysl kphsvpsvsr kaksqnkqat fsgrtkssyk silpypvspk
      961 qkhthmipgd kttknssstt senrvnnliv ptldentfpk qislrqahqq qqqqqqqqgs
     1021 rppglsksqv klmdledcal wegkprtyit eeradvsltt lltaqaslkt kpihtiirkr
     1081 appcnndfcr lgcvcsslal ekrqpahcrr pdcmfgctcl krkvvlvkgg sktkhfqrks
     1141 ahrdpvfydt lgeeqkeege egvkeeeeql kekkkrkkle yticetepeq pvrhyplwvk
     1201 vegevdpepv yiptpsviep mrplllpqpe vssttvkgkl ltgikparay tpkpnpvire
     1261 edkdpvylyf esmmtcarvr vyerkkeeer dpspspspsf qqqgschssp encsvkepas
     1321 eqqplkpltc dleddsdksq ekswkascne gesastsyvh qrspggptkl ieiisdcnwe
     1381 edrnkilsil sqhinsnmpq slkvgsfiie lasqrksrge knppvyssrv kismpscqdq
     1441 ddmaeksgse tpdgplspgk mddvspvqtd aldsvrerlh ggkglpfyag lspagklvay
     1501 krkpssstsg liqychlqgs iqcqggciqe ttypvafniq fqngiifwhy nkspweeseg
     1561 vcpsektncr gdhsciffhg dhtnfiselc shytlgn
//
LOCUS       XP_061013491            1584 aa            linear   MAM 02-DEC-2023
DEFINITION  MAX gene-associated protein isoform X11 [Dama dama].
ACCESSION   XP_061013491
VERSION     XP_061013491.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157508.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1584
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1584
                     /product="MAX gene-associated protein isoform X11"
                     /calculated_mol_wt=175863
     Region          75..260
                     /region_name="T-box_MGA-like"
                     /note="DNA-binding domain of MAX gene-associated protein
                     and related T-box proteins; cd20195"
                     /db_xref="CDD:410321"
     Site            order(102..103,136,180,183,196..197,237..240,245,248..249,
                     252..258)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410321"
     Region          1078..1119
                     /region_name="MGA_dom"
                     /note="MGA, conserved domain; pfam16059"
                     /db_xref="CDD:464998"
     CDS             1..1584
                     /gene="MGA"
                     /coded_by="XM_061157508.1:167..4921"
                     /db_xref="GeneID:133066427"
ORIGIN      
        1 meekqqiila nqdggtvpga aptffvilkq pgngktdqgi lvtnrdacal assvsspgks
       61 kgkiclpadc tvggitvtld nnsmwnefyh rstemiltkq grrmfpycry witgldsnmk
      121 yilvmdispv dnhrykwngr wwepsgkaep hvlgrvfihp espstghywm hqpvsfyklk
      181 ltnntldqeg hiilhsmhry lprlhlvpae kateviqlng pgvhtftfpq teffavtayq
      241 niqitqlkid ynpfakgfrd dglnskpqrd gkqknssdqe gnsvpsspgq rvrltegegs
      301 emqltdldpl srgqetsgkg letpslnikr dflgfmdids algevpqlkq evserpsfci
      361 tgnsaevpwr iidgsktcfl lragfslpil slgnsfedgs hvtsplnpne nfnvvikeep
      421 lddyeyelge cpegvtvkqe etdeetdvys nsdddpilek qlkrhnkadn leadhpsskw
      481 qpnspsgvak akmfkldagk mpvvylepca vtkstvkvse lpdnmlstsw kdrsslltel
      541 dylpayiens netgfglgre sendlgshsp dtrvvqkyps lkeaqwkypd vsgsvntekl
      601 ldgskssved sflgkedlgr kktmlkisaa prtvnanqna ppnvpgkrgr prklklskag
      661 rppkntgrsl tstkntltgp gstfpdvkpd ledvdgvlfv sfeskealdi havdgtnees
      721 cslqasaand pgcrarishl ekeliedlka lrhkqvihpg lqevglklns vdptmsidlk
      781 ylgvqlplap atsfpfwnlt ganpaspdag fpfvsrtgkt ndftkikgwr gkfhsasasr
      841 neggnsegpl knrsafcsdk ldeylenegk lmetsmgfss naptspvvyq lptkstsyvr
      901 tldsvlkkqs tvspstsysl kphsvpsvsr kaksqnkqat fsgrtkssyk silpypvspk
      961 qkhthmipgd kttknssstt senrvnnliv ptldentfpk qislrqahqq qqqqqqqqgs
     1021 rppglsksqv klmdledcal wegkprtyit eeradvsltt lltaqaslkt kpihtiirkr
     1081 appcnndfcr lgcvcsslal ekrqpahcrr pdcmfgctcl krkvvlvkgg sktkhfqrks
     1141 ahrdpvfydt lgeeqkeege egvkeeeeql kekkkrkkle yticetepeq pvrhyplwvk
     1201 vegevdpepv yiptpsviep mrplllpqpe vssttvkgkl ltgikparay tpkpnpvire
     1261 edkdpvylyf esmmtcarvr vyerkkeeer dpspspspsf qqqgschssp encsvkepas
     1321 eqqplkpltc dleddsdksq ekswkascne gesastsyvh qrspggptkl ieiisdcnwe
     1381 edrnkilsil sqhinsnmpq slkvgsfiie lasqrksrge knppvyssrv kismpscqdq
     1441 ddmaeksgse tpdgplspgk mddvspvqtd aldsvrerlh ggkglpfyag lspagklvay
     1501 krkpssstsg liqychlqgs iqcqggciqe ttypvafniq fqngiifwhy nkspweeseg
     1561 vcpsektncg stlswwcvht vcde
//
LOCUS       XP_061013492            1551 aa            linear   MAM 02-DEC-2023
DEFINITION  MAX gene-associated protein isoform X12 [Dama dama].
ACCESSION   XP_061013492
VERSION     XP_061013492.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157509.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1551
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1551
                     /product="MAX gene-associated protein isoform X12"
                     /calculated_mol_wt=172189
     Region          75..260
                     /region_name="T-box_MGA-like"
                     /note="DNA-binding domain of MAX gene-associated protein
                     and related T-box proteins; cd20195"
                     /db_xref="CDD:410321"
     Site            order(102..103,136,180,183,196..197,237..240,245,248..249,
                     252..258)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410321"
     Region          1078..1119
                     /region_name="MGA_dom"
                     /note="MGA, conserved domain; pfam16059"
                     /db_xref="CDD:464998"
     CDS             1..1551
                     /gene="MGA"
                     /coded_by="XM_061157509.1:167..4822"
                     /db_xref="GeneID:133066427"
ORIGIN      
        1 meekqqiila nqdggtvpga aptffvilkq pgngktdqgi lvtnrdacal assvsspgks
       61 kgkiclpadc tvggitvtld nnsmwnefyh rstemiltkq grrmfpycry witgldsnmk
      121 yilvmdispv dnhrykwngr wwepsgkaep hvlgrvfihp espstghywm hqpvsfyklk
      181 ltnntldqeg hiilhsmhry lprlhlvpae kateviqlng pgvhtftfpq teffavtayq
      241 niqitqlkid ynpfakgfrd dglnskpqrd gkqknssdqe gnsvpsspgq rvrltegegs
      301 emqltdldpl srgqetsgkg letpslnikr dflgfmdids algevpqlkq evserpsfci
      361 tgnsaevpwr iidgsktcfl lragfslpil slgnsfedgs hvtsplnpne nfnvvikeep
      421 lddyeyelge cpegvtvkqe etdeetdvys nsdddpilek qlkrhnkadn leadhpsskw
      481 qpnspsgvak akmfkldagk mpvvylepca vtkstvkvse lpdnmlstsw kdrsslltel
      541 dylpayiens netgfglgre sendlgshsp dtrvvqkyps lkeaqwkypd vsgsvntekl
      601 ldgskssved sflgkedlgr kktmlkisaa prtvnanqna ppnvpgkrgr prklklskag
      661 rppkntgrsl tstkntltgp gstfpdvkpd ledvdgvlfv sfeskealdi havdgtnees
      721 cslqasaand pgcrarishl ekeliedlka lrhkqvihpg lqevglklns vdptmsidlk
      781 ylgvqlplap atsfpfwnlt ganpaspdag fpfvsrtgkt ndftkikgwr gkfhsasasr
      841 neggnsegpl knrsafcsdk ldeylenegk lmetsmgfss naptspvvyq lptkstsyvr
      901 tldsvlkkqs tvspstsysl kphsvpsvsr kaksqnkqat fsgrtkssyk silpypvspk
      961 qkhthmipgd kttknssstt senrvnnliv ptldentfpk qislrqahqq qqqqqqqqgs
     1021 rppglsksqv klmdledcal wegkprtyit eeradvsltt lltaqaslkt kpihtiirkr
     1081 appcnndfcr lgcvcsslal ekrqpahcrr pdcmfgctcl krkvvlvkgg sktkhfqrks
     1141 ahrdpvfydt lgeeqkeege egvkeeeeql kekkkrkkle yticetepeq pvrhyplwvk
     1201 vegevdpepv yiptpsviep mrplllpqpe vssttvkgkl ltgikparay tpkpnpvire
     1261 edkdpvylyf esmmtcarvr vyerkkeeer dpspspspsf qqqgschssp encsvkepas
     1321 eqqplkpltc dleddsdksq ekswkascne gesastsyvh qrspggptkl ieiisdcnwe
     1381 edrnkilsil sqhinsnmpq slkvgsfiie lasqrksrge knppvyssrv kismpscqdq
     1441 ddmaeksgse tpdgplspgk mddvspvqtd aldsvrerlh ggkglpfyag lspagklvay
     1501 krkpssstsg liqhpmprwl hpgnhvpccl qhpipkwhhl lalqqialgr i
//
LOCUS       XP_061013493            1551 aa            linear   MAM 02-DEC-2023
DEFINITION  MAX gene-associated protein isoform X12 [Dama dama].
ACCESSION   XP_061013493
VERSION     XP_061013493.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157510.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1551
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1551
                     /product="MAX gene-associated protein isoform X12"
                     /calculated_mol_wt=172189
     Region          75..260
                     /region_name="T-box_MGA-like"
                     /note="DNA-binding domain of MAX gene-associated protein
                     and related T-box proteins; cd20195"
                     /db_xref="CDD:410321"
     Site            order(102..103,136,180,183,196..197,237..240,245,248..249,
                     252..258)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410321"
     Region          1078..1119
                     /region_name="MGA_dom"
                     /note="MGA, conserved domain; pfam16059"
                     /db_xref="CDD:464998"
     CDS             1..1551
                     /gene="MGA"
                     /coded_by="XM_061157510.1:167..4822"
                     /db_xref="GeneID:133066427"
ORIGIN      
        1 meekqqiila nqdggtvpga aptffvilkq pgngktdqgi lvtnrdacal assvsspgks
       61 kgkiclpadc tvggitvtld nnsmwnefyh rstemiltkq grrmfpycry witgldsnmk
      121 yilvmdispv dnhrykwngr wwepsgkaep hvlgrvfihp espstghywm hqpvsfyklk
      181 ltnntldqeg hiilhsmhry lprlhlvpae kateviqlng pgvhtftfpq teffavtayq
      241 niqitqlkid ynpfakgfrd dglnskpqrd gkqknssdqe gnsvpsspgq rvrltegegs
      301 emqltdldpl srgqetsgkg letpslnikr dflgfmdids algevpqlkq evserpsfci
      361 tgnsaevpwr iidgsktcfl lragfslpil slgnsfedgs hvtsplnpne nfnvvikeep
      421 lddyeyelge cpegvtvkqe etdeetdvys nsdddpilek qlkrhnkadn leadhpsskw
      481 qpnspsgvak akmfkldagk mpvvylepca vtkstvkvse lpdnmlstsw kdrsslltel
      541 dylpayiens netgfglgre sendlgshsp dtrvvqkyps lkeaqwkypd vsgsvntekl
      601 ldgskssved sflgkedlgr kktmlkisaa prtvnanqna ppnvpgkrgr prklklskag
      661 rppkntgrsl tstkntltgp gstfpdvkpd ledvdgvlfv sfeskealdi havdgtnees
      721 cslqasaand pgcrarishl ekeliedlka lrhkqvihpg lqevglklns vdptmsidlk
      781 ylgvqlplap atsfpfwnlt ganpaspdag fpfvsrtgkt ndftkikgwr gkfhsasasr
      841 neggnsegpl knrsafcsdk ldeylenegk lmetsmgfss naptspvvyq lptkstsyvr
      901 tldsvlkkqs tvspstsysl kphsvpsvsr kaksqnkqat fsgrtkssyk silpypvspk
      961 qkhthmipgd kttknssstt senrvnnliv ptldentfpk qislrqahqq qqqqqqqqgs
     1021 rppglsksqv klmdledcal wegkprtyit eeradvsltt lltaqaslkt kpihtiirkr
     1081 appcnndfcr lgcvcsslal ekrqpahcrr pdcmfgctcl krkvvlvkgg sktkhfqrks
     1141 ahrdpvfydt lgeeqkeege egvkeeeeql kekkkrkkle yticetepeq pvrhyplwvk
     1201 vegevdpepv yiptpsviep mrplllpqpe vssttvkgkl ltgikparay tpkpnpvire
     1261 edkdpvylyf esmmtcarvr vyerkkeeer dpspspspsf qqqgschssp encsvkepas
     1321 eqqplkpltc dleddsdksq ekswkascne gesastsyvh qrspggptkl ieiisdcnwe
     1381 edrnkilsil sqhinsnmpq slkvgsfiie lasqrksrge knppvyssrv kismpscqdq
     1441 ddmaeksgse tpdgplspgk mddvspvqtd aldsvrerlh ggkglpfyag lspagklvay
     1501 krkpssstsg liqhpmprwl hpgnhvpccl qhpipkwhhl lalqqialgr i
//
LOCUS       XP_061013494            1551 aa            linear   MAM 02-DEC-2023
DEFINITION  MAX gene-associated protein isoform X12 [Dama dama].
ACCESSION   XP_061013494
VERSION     XP_061013494.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157511.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1551
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1551
                     /product="MAX gene-associated protein isoform X12"
                     /calculated_mol_wt=172189
     Region          75..260
                     /region_name="T-box_MGA-like"
                     /note="DNA-binding domain of MAX gene-associated protein
                     and related T-box proteins; cd20195"
                     /db_xref="CDD:410321"
     Site            order(102..103,136,180,183,196..197,237..240,245,248..249,
                     252..258)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410321"
     Region          1078..1119
                     /region_name="MGA_dom"
                     /note="MGA, conserved domain; pfam16059"
                     /db_xref="CDD:464998"
     CDS             1..1551
                     /gene="MGA"
                     /coded_by="XM_061157511.1:167..4822"
                     /db_xref="GeneID:133066427"
ORIGIN      
        1 meekqqiila nqdggtvpga aptffvilkq pgngktdqgi lvtnrdacal assvsspgks
       61 kgkiclpadc tvggitvtld nnsmwnefyh rstemiltkq grrmfpycry witgldsnmk
      121 yilvmdispv dnhrykwngr wwepsgkaep hvlgrvfihp espstghywm hqpvsfyklk
      181 ltnntldqeg hiilhsmhry lprlhlvpae kateviqlng pgvhtftfpq teffavtayq
      241 niqitqlkid ynpfakgfrd dglnskpqrd gkqknssdqe gnsvpsspgq rvrltegegs
      301 emqltdldpl srgqetsgkg letpslnikr dflgfmdids algevpqlkq evserpsfci
      361 tgnsaevpwr iidgsktcfl lragfslpil slgnsfedgs hvtsplnpne nfnvvikeep
      421 lddyeyelge cpegvtvkqe etdeetdvys nsdddpilek qlkrhnkadn leadhpsskw
      481 qpnspsgvak akmfkldagk mpvvylepca vtkstvkvse lpdnmlstsw kdrsslltel
      541 dylpayiens netgfglgre sendlgshsp dtrvvqkyps lkeaqwkypd vsgsvntekl
      601 ldgskssved sflgkedlgr kktmlkisaa prtvnanqna ppnvpgkrgr prklklskag
      661 rppkntgrsl tstkntltgp gstfpdvkpd ledvdgvlfv sfeskealdi havdgtnees
      721 cslqasaand pgcrarishl ekeliedlka lrhkqvihpg lqevglklns vdptmsidlk
      781 ylgvqlplap atsfpfwnlt ganpaspdag fpfvsrtgkt ndftkikgwr gkfhsasasr
      841 neggnsegpl knrsafcsdk ldeylenegk lmetsmgfss naptspvvyq lptkstsyvr
      901 tldsvlkkqs tvspstsysl kphsvpsvsr kaksqnkqat fsgrtkssyk silpypvspk
      961 qkhthmipgd kttknssstt senrvnnliv ptldentfpk qislrqahqq qqqqqqqqgs
     1021 rppglsksqv klmdledcal wegkprtyit eeradvsltt lltaqaslkt kpihtiirkr
     1081 appcnndfcr lgcvcsslal ekrqpahcrr pdcmfgctcl krkvvlvkgg sktkhfqrks
     1141 ahrdpvfydt lgeeqkeege egvkeeeeql kekkkrkkle yticetepeq pvrhyplwvk
     1201 vegevdpepv yiptpsviep mrplllpqpe vssttvkgkl ltgikparay tpkpnpvire
     1261 edkdpvylyf esmmtcarvr vyerkkeeer dpspspspsf qqqgschssp encsvkepas
     1321 eqqplkpltc dleddsdksq ekswkascne gesastsyvh qrspggptkl ieiisdcnwe
     1381 edrnkilsil sqhinsnmpq slkvgsfiie lasqrksrge knppvyssrv kismpscqdq
     1441 ddmaeksgse tpdgplspgk mddvspvqtd aldsvrerlh ggkglpfyag lspagklvay
     1501 krkpssstsg liqhpmprwl hpgnhvpccl qhpipkwhhl lalqqialgr i
//
LOCUS       XP_061013495            1487 aa            linear   MAM 02-DEC-2023
DEFINITION  MAX gene-associated protein isoform X13 [Dama dama].
ACCESSION   XP_061013495
VERSION     XP_061013495.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157512.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1487
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1487
                     /product="MAX gene-associated protein isoform X13"
                     /calculated_mol_wt=165658
     Region          75..260
                     /region_name="T-box_MGA-like"
                     /note="DNA-binding domain of MAX gene-associated protein
                     and related T-box proteins; cd20195"
                     /db_xref="CDD:410321"
     Site            order(102..103,136,180,183,196..197,237..240,245,248..249,
                     252..258)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410321"
     Region          1078..1119
                     /region_name="MGA_dom"
                     /note="MGA, conserved domain; pfam16059"
                     /db_xref="CDD:464998"
     CDS             1..1487
                     /gene="MGA"
                     /coded_by="XM_061157512.1:167..4630"
                     /db_xref="GeneID:133066427"
ORIGIN      
        1 meekqqiila nqdggtvpga aptffvilkq pgngktdqgi lvtnrdacal assvsspgks
       61 kgkiclpadc tvggitvtld nnsmwnefyh rstemiltkq grrmfpycry witgldsnmk
      121 yilvmdispv dnhrykwngr wwepsgkaep hvlgrvfihp espstghywm hqpvsfyklk
      181 ltnntldqeg hiilhsmhry lprlhlvpae kateviqlng pgvhtftfpq teffavtayq
      241 niqitqlkid ynpfakgfrd dglnskpqrd gkqknssdqe gnsvpsspgq rvrltegegs
      301 emqltdldpl srgqetsgkg letpslnikr dflgfmdids algevpqlkq evserpsfci
      361 tgnsaevpwr iidgsktcfl lragfslpil slgnsfedgs hvtsplnpne nfnvvikeep
      421 lddyeyelge cpegvtvkqe etdeetdvys nsdddpilek qlkrhnkadn leadhpsskw
      481 qpnspsgvak akmfkldagk mpvvylepca vtkstvkvse lpdnmlstsw kdrsslltel
      541 dylpayiens netgfglgre sendlgshsp dtrvvqkyps lkeaqwkypd vsgsvntekl
      601 ldgskssved sflgkedlgr kktmlkisaa prtvnanqna ppnvpgkrgr prklklskag
      661 rppkntgrsl tstkntltgp gstfpdvkpd ledvdgvlfv sfeskealdi havdgtnees
      721 cslqasaand pgcrarishl ekeliedlka lrhkqvihpg lqevglklns vdptmsidlk
      781 ylgvqlplap atsfpfwnlt ganpaspdag fpfvsrtgkt ndftkikgwr gkfhsasasr
      841 neggnsegpl knrsafcsdk ldeylenegk lmetsmgfss naptspvvyq lptkstsyvr
      901 tldsvlkkqs tvspstsysl kphsvpsvsr kaksqnkqat fsgrtkssyk silpypvspk
      961 qkhthmipgd kttknssstt senrvnnliv ptldentfpk qislrqahqq qqqqqqqqgs
     1021 rppglsksqv klmdledcal wegkprtyit eeradvsltt lltaqaslkt kpihtiirkr
     1081 appcnndfcr lgcvcsslal ekrqpahcrr pdcmfgctcl krkvvlvkgg sktkhfqrks
     1141 ahrdpvfydt lgeeqkeege egvkeeeeql kekkkrkkle yticetepeq pvrhyplwvk
     1201 vegevdpepv yiptpsviep mrplllpqpe vssttvkgkl ltgikparay tpkpnpvire
     1261 edkdpvylyf esmmtcarvr vyerkkeeer dpspspspsf qqqgschssp encsvkepas
     1321 eqqplkpltc dleddsdksq ekswkascne gesastsyvh qrspggptkl ieiisdcnwe
     1381 edrnkilsil sqhinsnmpq slkychlqgs iqcqggciqe ttypvafniq fqngiifwhy
     1441 nkspweeseg vcpsektncr gdhsciffhg dhtnfiselc shytlgn
//
LOCUS       XP_061013496            1441 aa            linear   MAM 02-DEC-2023
DEFINITION  MAX gene-associated protein isoform X14 [Dama dama].
ACCESSION   XP_061013496
VERSION     XP_061013496.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157513.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1441
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1441
                     /product="MAX gene-associated protein isoform X14"
                     /calculated_mol_wt=160499
     Region          75..260
                     /region_name="T-box_MGA-like"
                     /note="DNA-binding domain of MAX gene-associated protein
                     and related T-box proteins; cd20195"
                     /db_xref="CDD:410321"
     Site            order(102..103,136,180,183,196..197,237..240,245,248..249,
                     252..258)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410321"
     Region          1078..1119
                     /region_name="MGA_dom"
                     /note="MGA, conserved domain; pfam16059"
                     /db_xref="CDD:464998"
     CDS             1..1441
                     /gene="MGA"
                     /coded_by="XM_061157513.1:166..4491"
                     /db_xref="GeneID:133066427"
ORIGIN      
        1 meekqqiila nqdggtvpga aptffvilkq pgngktdqgi lvtnrdacal assvsspgks
       61 kgkiclpadc tvggitvtld nnsmwnefyh rstemiltkq grrmfpycry witgldsnmk
      121 yilvmdispv dnhrykwngr wwepsgkaep hvlgrvfihp espstghywm hqpvsfyklk
      181 ltnntldqeg hiilhsmhry lprlhlvpae kateviqlng pgvhtftfpq teffavtayq
      241 niqitqlkid ynpfakgfrd dglnskpqrd gkqknssdqe gnsvpsspgq rvrltegegs
      301 emqltdldpl srgqetsgkg letpslnikr dflgfmdids algevpqlkq evserpsfci
      361 tgnsaevpwr iidgsktcfl lragfslpil slgnsfedgs hvtsplnpne nfnvvikeep
      421 lddyeyelge cpegvtvkqe etdeetdvys nsdddpilek qlkrhnkadn leadhpsskw
      481 qpnspsgvak akmfkldagk mpvvylepca vtkstvkvse lpdnmlstsw kdrsslltel
      541 dylpayiens netgfglgre sendlgshsp dtrvvqkyps lkeaqwkypd vsgsvntekl
      601 ldgskssved sflgkedlgr kktmlkisaa prtvnanqna ppnvpgkrgr prklklskag
      661 rppkntgrsl tstkntltgp gstfpdvkpd ledvdgvlfv sfeskealdi havdgtnees
      721 cslqasaand pgcrarishl ekeliedlka lrhkqvihpg lqevglklns vdptmsidlk
      781 ylgvqlplap atsfpfwnlt ganpaspdag fpfvsrtgkt ndftkikgwr gkfhsasasr
      841 neggnsegpl knrsafcsdk ldeylenegk lmetsmgfss naptspvvyq lptkstsyvr
      901 tldsvlkkqs tvspstsysl kphsvpsvsr kaksqnkqat fsgrtkssyk silpypvspk
      961 qkhthmipgd kttknssstt senrvnnliv ptldentfpk qislrqahqq qqqqqqqqgs
     1021 rppglsksqv klmdledcal wegkprtyit eeradvsltt lltaqaslkt kpihtiirkr
     1081 appcnndfcr lgcvcsslal ekrqpahcrr pdcmfgctcl krkvvlvkgg sktkhfqrks
     1141 ahrdpvfydt lgeeqkeege egvkeeeeql kekkkrkkle yticetepeq pvrhyplwvk
     1201 vegevdpepv yiptpsviep mrplllpqpe vssttvkgkl ltgikparay tpkpnpvire
     1261 edkdpvylyf esmmtcarvr vyerkkeeer dpspspspsf qqqgschssp encsvkepas
     1321 eqqplkpltc dleddsdksq ekswkascne gesastsyvh qrspggptkl ieiisdcnwe
     1381 edrnkilsil sqhinsnmpq slkhpmprwl hpgnhvpccl qhpipkwhhl lalqqialgr
     1441 i
//
LOCUS       XP_061013497            1502 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase-binding protein 1 isoform X1 [Dama
            dama].
ACCESSION   XP_061013497
VERSION     XP_061013497.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157514.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1502
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1502
                     /product="mitogen-activated protein kinase-binding protein
                     1 isoform X1"
                     /calculated_mol_wt=162223
     Region          16..505
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          94..133
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          139..173
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          181..219
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          275..312
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <291..729
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          330..379
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          479..514
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          520..560
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          565..605
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          615..650
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          657..695
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          701..727
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <1102..1403
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1502
                     /gene="MAPKBP1"
                     /coded_by="XM_061157514.1:214..4722"
                     /db_xref="GeneID:133066430"
ORIGIN      
        1 mmavegstit sriknllrsp siklrrskag nrredlsskv tlekvlgitv sggrglacdp
       61 rsglvaypag cvvvlfnprk hkqhhilnss rktitalafs pdgkylvtge sghmpavrvw
      121 dvaehsqvae lqehkygvac vafspsakyi vsvgyqhdmi vnvwawkkni vvasnkvssr
      181 vtavsfsedc syfvtagnrh ikfwylddsk tskvnatvpl lgrsgllgel rnnlftdvac
      241 grgkkadstf citssgllce fsdrrlldkw velrttvahc isvsqdyifc gcadgtvrlf
      301 npsnlhflst lprphalgtd iasvteasrl fsgaanaryp dtialtfdpt nqwlscvynd
      361 hsiyvwdvrd pkkvgkvysa lyhsscvwsv evypevkdsn qaclppssfi tcssdntirl
      421 wntessgvhg stlhrnilsn dlikiiyvdg ntqalldtel pggdkadgsl mdprvgirsv
      481 cispngqhla sgdrvgtlrv helqslneml kveahdseil cleyskpntg lkllasasrd
      541 rlihvldagr eyslqqtlde hsssitavkf aasdgqvrmi scgadksiyf rtaqksgdgv
      601 qftrthhvvr kttlydmdve pswkytaigc qdrnirifni ssgkqkklfk gsqgedgtli
      661 kvqtdpsgiy iatscsdknl sifdfssgec vatmfghsei vtgmkfsndc khlisvsgds
      721 cvfvwrlsse mtismrqrla elrqrqrggk qqgssspqra agpnrpeaps mlspgpalss
      781 dsdkegedeg teeeelpalp vlatgtkkep asvpspalpr slshwemsra qemeefldpa
      841 patnqgprrr grwaqpgvel svrsmldlrq letlapgprg phqdspamtp sgpgkhsqqa
      901 petssvsqne klprpqasqp cscphiirll sqeeglfaqd lepapiedgi vypepgdspt
      961 ldtsefqvqa psrgtlgrvy adgrgsekhs pdsacsvdfs ssrlsspehp nedsestepl
     1021 svdgissdle epaegdeeee edeggtgpye vqegsphtpd qeqflkqhfe tlangaapgg
     1081 pvrvpertes rsissrfllq vqspplreps psssslavts rlaqglqasg eqprgigasp
     1141 pgappeaeps pgnpgpqqav pvllprrrls pdsgwspkrv aaagprgglq kaqsvqslvp
     1201 qdeapppgll lsqereaqgc lrslpqadrr lsrphsyqsp ttssmakiar sisvgenlgl
     1261 aaehqapapi risplnklal psrahlvldi pkplpdrptl atfspatkgr apgeaeqpsc
     1321 paglgkahst aerracsgeg atpkprtecq aqpgpnspra qqlpvgsllr gpanvqplek
     1381 tpspvecarp gatlsrdsep avsleqceql vaelqgsvrq avqlyhlvan cktpsveqsr
     1441 itqllrntfs svrqeleala gavlaspggs pgavgaeqtq alleqysell lraverrmer
     1501 rl
//
LOCUS       XP_061013498            1438 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase-binding protein 1 isoform X2 [Dama
            dama].
ACCESSION   XP_061013498
VERSION     XP_061013498.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157515.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1438
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1438
                     /product="mitogen-activated protein kinase-binding protein
                     1 isoform X2"
                     /calculated_mol_wt=155554
     Region          20..358
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(26,44,48,56..57,69..70,88,94,100..101,112..113,130,
                     134,140..141,159,189,199,214..215,226,230,236..237,
                     250..251,291,296,302..303,315,319,347,351,357..358)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          30..69
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          75..109
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          117..155
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          211..248
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <227..665
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          266..315
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          415..450
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          456..496
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          501..541
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          551..586
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          593..631
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          637..663
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <1038..1339
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1438
                     /gene="MAPKBP1"
                     /coded_by="XM_061157515.1:127..4443"
                     /db_xref="GeneID:133066430"
ORIGIN      
        1 mvarpwcvvv lfnprkhkqh hilnssrkti talafspdgk ylvtgesghm pavrvwdvae
       61 hsqvaelqeh kygvacvafs psakyivsvg yqhdmivnvw awkknivvas nkvssrvtav
      121 sfsedcsyfv tagnrhikfw ylddsktskv natvpllgrs gllgelrnnl ftdvacgrgk
      181 kadstfcits sgllcefsdr rlldkwvelr ttvahcisvs qdyifcgcad gtvrlfnpsn
      241 lhflstlprp halgtdiasv teasrlfsga anarypdtia ltfdptnqwl scvyndhsiy
      301 vwdvrdpkkv gkvysalyhs scvwsvevyp evkdsnqacl ppssfitcss dntirlwnte
      361 ssgvhgstlh rnilsndlik iiyvdgntqa lldtelpggd kadgslmdpr vgirsvcisp
      421 ngqhlasgdr vgtlrvhelq slnemlkvea hdseilcley skpntglkll asasrdrlih
      481 vldagreysl qqtldehsss itavkfaasd gqvrmiscga dksiyfrtaq ksgdgvqftr
      541 thhvvrkttl ydmdvepswk ytaigcqdrn irifnissgk qkklfkgsqg edgtlikvqt
      601 dpsgiyiats csdknlsifd fssgecvatm fghseivtgm kfsndckhli svsgdscvfv
      661 wrlssemtis mrqrlaelrq rqrggkqqgs sspqraagpn rpeapsmlsp gpalssdsdk
      721 egedegteee elpalpvlat gtkkepasvp spalprslsh wemsraqeme efldpapatn
      781 qgprrrgrwa qpgvelsvrs mldlrqletl apgprgphqd spamtpsgpg khsqqapets
      841 svsqneklpr pqasqpcscp hiirllsqee glfaqdlepa piedgivype pgdsptldts
      901 efqvqapsrg tlgrvyadgr gsekhspdsa csvdfsssrl sspehpneds esteplsvdg
      961 issdleepae gdeeeeedeg gtgpyevqeg sphtpdqeqf lkqhfetlan gaapggpvrv
     1021 pertesrsis srfllqvqsp plrepspsss slavtsrlaq glqasgeqpr gigasppgap
     1081 peaepspgnp gpqqavpvll prrrlspdsg wspkrvaaag prgglqkaqs vqslvpqdea
     1141 pppglllsqe reaqgclrsl pqadrrlsrp hsyqspttss makiarsisv genlglaaeh
     1201 qapapirisp lnklalpsra hlvldipkpl pdrptlatfs patkgrapge aeqpscpagl
     1261 gkahstaerr acsgegatpk prtecqaqpg pnspraqqlp vgsllrgpan vqplektpsp
     1321 vecarpgatl srdsepavsl eqceqlvael qgsvrqavql yhlvancktp sveqsritql
     1381 lrntfssvrq elealagavl aspggspgav gaeqtqalle qyselllrav errmerrl
//
LOCUS       XP_061013499            1416 aa            linear   MAM 02-DEC-2023
DEFINITION  mitogen-activated protein kinase-binding protein 1 isoform X3 [Dama
            dama].
ACCESSION   XP_061013499
VERSION     XP_061013499.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157516.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1416
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1416
                     /product="mitogen-activated protein kinase-binding protein
                     1 isoform X3"
                     /calculated_mol_wt=153443
     Region          16..505
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          94..133
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          139..173
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          181..219
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          275..312
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <291..729
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          330..379
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          479..514
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          520..560
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          565..605
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          615..650
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          657..695
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          701..727
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <746..1317
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1416
                     /gene="MAPKBP1"
                     /coded_by="XM_061157516.1:690..4940"
                     /db_xref="GeneID:133066430"
ORIGIN      
        1 mmavegstit sriknllrsp siklrrskag nrredlsskv tlekvlgitv sggrglacdp
       61 rsglvaypag cvvvlfnprk hkqhhilnss rktitalafs pdgkylvtge sghmpavrvw
      121 dvaehsqvae lqehkygvac vafspsakyi vsvgyqhdmi vnvwawkkni vvasnkvssr
      181 vtavsfsedc syfvtagnrh ikfwylddsk tskvnatvpl lgrsgllgel rnnlftdvac
      241 grgkkadstf citssgllce fsdrrlldkw velrttvahc isvsqdyifc gcadgtvrlf
      301 npsnlhflst lprphalgtd iasvteasrl fsgaanaryp dtialtfdpt nqwlscvynd
      361 hsiyvwdvrd pkkvgkvysa lyhsscvwsv evypevkdsn qaclppssfi tcssdntirl
      421 wntessgvhg stlhrnilsn dlikiiyvdg ntqalldtel pggdkadgsl mdprvgirsv
      481 cispngqhla sgdrvgtlrv helqslneml kveahdseil cleyskpntg lkllasasrd
      541 rlihvldagr eyslqqtlde hsssitavkf aasdgqvrmi scgadksiyf rtaqksgdgv
      601 qftrthhvvr kttlydmdve pswkytaigc qdrnirifni ssgkqkklfk gsqgedgtli
      661 kvqtdpsgiy iatscsdknl sifdfssgec vatmfghsei vtgmkfsndc khlisvsgds
      721 cvfvwrlsse mtismrqrla elrqrqrggk qqgssspqra agpnrpeaps mlspgpalss
      781 dsdkegedeg teeeelpalp vlatgtkkep asvpspalpr slshwemsra qemeefldpa
      841 patnqgprrr grwaqpgvel svrsmldlrq letlapgprg phqdspamtp sgpgkhsqqa
      901 petssvsqne klprpqasqp cscphiirll sqeeglfaqd lepapiedgi vypepgdspt
      961 ldtsefqvqa psrgtlgrvy adgrgsekhs pdsacsvdfs ssrlsspehp nedsestepl
     1021 svdgissdle epaegdeeee edeggtgpye vqegsphtpd qeqflkqhfe tlangaapgg
     1081 pvrvpertes rsissrfllq vqspplreps psssslavts rlaqglqasg eqprgigasp
     1141 pgappeaeps pgnpgpqqav pvllprrrls pdsgwspkrv aaagprgglq kaqsvqslvp
     1201 qdeapppgll lsqereaqgc lrslpqadrr lsrphsyqsp ttssmakiar sisvgenlgl
     1261 aaehqapapi risplnklal psrahlvldi pkplpdrptl atfspatkgr apepavsleq
     1321 ceqlvaelqg svrqavqlyh lvancktpsv eqsritqllr ntfssvrqel ealagavlas
     1381 pggspgavga eqtqalleqy selllraver rmerrl
//
LOCUS       XP_061013500             890 aa            linear   MAM 02-DEC-2023
DEFINITION  tyrosine-protein kinase receptor TYRO3 [Dama dama].
ACCESSION   XP_061013500
VERSION     XP_061013500.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157517.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..890
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..890
                     /product="tyrosine-protein kinase receptor TYRO3"
                     /calculated_mol_wt=96697
     Region          50..136
                     /region_name="Ig1_Tyro3_like"
                     /note="First immunoglobulin (Ig)-like domain of Tyro3
                     receptor tyrosine kinase (RTK), and similar domains;
                     cd20961"
                     /db_xref="CDD:409553"
     Region          50..55
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409553"
     Region          58..67
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409553"
     Region          73..78
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409553"
     Region          81..83
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409553"
     Region          87..92
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409553"
     Region          97..104
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409553"
     Region          113..119
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409553"
     Region          125..136
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409553"
     Region          140..220
                     /region_name="IgI_2_Axl_Tyro3_like"
                     /note="Second immunoglobulin (Ig)-like domain of Axl/Tyro3
                     family receptor tyrosine kinases (RTKs); member of the
                     I-set of Ig superfamily (IgSF) domains; cd05749"
                     /db_xref="CDD:409407"
     Region          140..143
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409407"
     Region          146..150
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409407"
     Region          154..163
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409407"
     Region          168..175
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409407"
     Region          177..180
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409407"
     Region          184..195
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409407"
     Region          198..207
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409407"
     Site            206..211
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:409407"
     Site            order(209..211,213)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:409407"
     Region          211..220
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409407"
     Region          225..317
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(225,290,305)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(306..307,309..310)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          324..406
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     Site            order(402..403,405..406)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          508..791
                     /region_name="PTKc_Tyro3"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     Tyro3; cd05074"
                     /db_xref="CDD:270659"
     Site            order(524..528,532,548,550,581,604..606,610,655,659..660,
                     662,673,691..695,704,738)
                     /site_type="active"
                     /db_xref="CDD:270659"
     Site            order(524..525,532,548,581,604..606,610,655,659..660,662,
                     673)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270659"
     Site            order(655,659,691..695,704,738)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270659"
     Site            672..697
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270659"
     CDS             1..890
                     /gene="TYRO3"
                     /coded_by="XM_061157517.1:16..2688"
                     /db_xref="GeneID:133066431"
ORIGIN      
        1 malrrsmgrs glpplprppp pppllllagl avlllpepaa aglklmgapv kltvsqgqpv
       61 klncsvegme epeiqwvkdg avvhsmdqvy ipvseqhwig flslksvers dagrywcqve
      121 dggetetsqp vwltvegvpf ftvepkdlav ppnapfqlfc eavgppepvt iiwwrggtqv
      181 ggpapspsvl nvtgvtqstv fsceahnpkg lassrtatvh lqalpaapfn itvtklsssn
      241 vsvawvpgad graliqsctv qvtqapgdwe vlavmvpvpp ftcllrdltp atnyslrvrc
      301 analgpspya dwvpfrtkgl apasapqnlr airtdsglil eweevipesp segplgpykm
      361 swaqdngtqg eltvegtran ltvwdpqkdl tvrvcvtnav gcgpwsqplv vsshdhagqq
      421 gaphsrtswv pvvlgvltal vtaaalalil lrkrrketrf gqafdsvmar gepavhfraa
      481 rsfnrerper ieatldslgi sdelkdkled vlipeqqftl grmlgkgefg svreaqlkqe
      541 dgsfvkvavk mlkadiiass dieeflreaa cmkefdhphv aklvgvslrs rakgrlpipm
      601 vilpfmkhgd lhafllssri genpfnlplq tlvrfmvdia cgmeylssrn fihrdlaarn
      661 cmlaedmtvc vadfglsrki ysgdyyrqgc asklpvkwla lesladnlyt vhsdvwafgv
      721 tmweimtrgq tpyagienae iynyliggnr lkqppecmed vyelmyqcws adpkqrpsft
      781 clrmeletvl grlsvlsasq dplyinlega qepteggdle lpggdqassg vgdgsglgav
      841 ggtpsdyryi lspgelaerp aqgeqqpesp vsesqrllll qqgllphssc
//
LOCUS       XP_061013501            1395 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA polymerase II-associated protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061013501
VERSION     XP_061013501.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157518.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1395
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1395
                     /product="RNA polymerase II-associated protein 1 isoform
                     X1"
                     /calculated_mol_wt=152465
     Region          225..267
                     /region_name="RPAP1_N"
                     /note="RPAP1-like, N-terminal; pfam08621"
                     /db_xref="CDD:462539"
     Region          356..421
                     /region_name="RPAP1_C"
                     /note="RPAP1-like, C-terminal; pfam08620"
                     /db_xref="CDD:462538"
     CDS             1..1395
                     /gene="RPAP1"
                     /coded_by="XM_061157518.1:133..4320"
                     /db_xref="GeneID:133066432"
ORIGIN      
        1 mlsrpkpges evdllrfqsq flaagatpav qlvkkgsrra gdanveqppl qdhrdvvmld
       61 slpdlppalv pappkrarps pghllpehed peerlnrhdq hitavltkii erdtssmpvn
      121 lpvssgvafp pvfhrsqgrq gkpvtagkrs ifaqeiaarr asgakvslvr evasildppe
      181 samncealtt rergsqppwn sysfqgphlv tgkglksqea eqeaqtihee nvarlqalap
      241 eeilqeqqrl laqldpslva flkshsrtce qaeekatreq rpgrpsaevt gkeaiaptsa
      301 nvprqedele petpalalpv tpqkewlhmd tveleklhwt qdlpplrrqq tqermqarfs
      361 lqgellapdm dlpthlglhh hgeeaeragy slqelfhltr sqvsqqrala lhvlaqvigr
      421 aqagefgdql vgsvlhllld agflfllrfs lddrvdgvia aavralrall vapgdeelld
      481 safswyhgal mfalmpsqeg kedededeep paekaktksp eegnrppsel arhdvikgll
      541 atnllprlry vlevtcpgps vvldiltvli rlarhslesa trvlecprlv etvvreflpt
      601 swspmgsgpt sslhrvpcap amkllrvlas agrniaarll sgfdlrsrls rfiaedpqdl
      661 alpleeaetl steafrlwav aasyglgsdl yrelypvlmr alqavpkels spvprplalq
      721 riaslltllt qltlaagcia pepssdsaea sllatpssit wtqvsglhpl vepclrqtlk
      781 llprpemwsa lgpvptacll fldayyqaws qqpglcpedw lqdverlsgg lllpllehps
      841 lgrlwealgc csplcnpqsc avapetvssl aslgcagghp plslagsasp fpfltallsl
      901 lntlgrihkg lcgqlatvla apglqnyflr cvapvaaphl tpfsawalrh eyhlqylalt
      961 laqraatlqp pvagtdmalc hsmalallgr llpgsehlah elmlscvfrl eflperasgg
     1021 peaadfsdrl slgsggdlgc grgallaqac qdlpsirscy lthcslaras llasqalyrg
     1081 elrrvpalll avpkepllpt dwpflpliql yhrasdtpsg lppadtvgta lralqwvlvl
     1141 eswrpqalwa vspaarlarl mcvflvdsel fretpiqrlv aallarlcqp evlpnlnldc
     1201 plpgltsfpd lyanflehfe avsfgdhlfg alillplqrr fsvtlrlalf gehvgalral
     1261 glpltqlpvs lecymapped nvallqlyfr alvtgalrpr wcpvlyavav ahvnsfifsq
     1321 dpnnsdeika acrsmlqktw lltdeglrqh llhyklpnsa lpegfelypq lppvrqqylq
     1381 klrisgvlpn gvset
//
LOCUS       XP_061013502            1213 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA polymerase II-associated protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061013502
VERSION     XP_061013502.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157519.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1213
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1213
                     /product="RNA polymerase II-associated protein 1 isoform
                     X2"
                     /calculated_mol_wt=132777
     Region          43..85
                     /region_name="RPAP1_N"
                     /note="RPAP1-like, N-terminal; pfam08621"
                     /db_xref="CDD:462539"
     Region          174..239
                     /region_name="RPAP1_C"
                     /note="RPAP1-like, C-terminal; pfam08620"
                     /db_xref="CDD:462538"
     CDS             1..1213
                     /gene="RPAP1"
                     /coded_by="XM_061157519.1:139..3780"
                     /db_xref="GeneID:133066432"
ORIGIN      
        1 mncealttre rgsqppwnsy sfqgphlvtg kglksqeaeq eaqtiheenv arlqalapee
       61 ilqeqqrlla qldpslvafl kshsrtceqa eekatreqrp grpsaevtgk eaiaptsanv
      121 prqedelepe tpalalpvtp qkewlhmdtv eleklhwtqd lpplrrqqtq ermqarfslq
      181 gellapdmdl pthlglhhhg eeaeragysl qelfhltrsq vsqqralalh vlaqvigraq
      241 agefgdqlvg svlhllldag flfllrfsld drvdgviaaa vralrallva pgdeelldsa
      301 fswyhgalmf almpsqegke dededeeppa ekaktkspee gnrppselar hdvikgllat
      361 nllprlryvl evtcpgpsvv ldiltvlirl arhslesatr vlecprlvet vvreflptsw
      421 spmgsgptss lhrvpcapam kllrvlasag rniaarllsg fdlrsrlsrf iaedpqdlal
      481 pleeaetlst eafrlwavaa syglgsdlyr elypvlmral qavpkelssp vprplalqri
      541 aslltlltql tlaagciape pssdsaeasl latpssitwt qvsglhplve pclrqtlkll
      601 prpemwsalg pvptacllfl dayyqawsqq pglcpedwlq dverlsggll lpllehpslg
      661 rlwealgccs plcnpqscav apetvsslas lgcagghppl slagsaspfp fltallslln
      721 tlgrihkglc gqlatvlaap glqnyflrcv apvaaphltp fsawalrhey hlqylaltla
      781 qraatlqppv agtdmalchs malallgrll pgsehlahel mlscvfrlef lperasggpe
      841 aadfsdrlsl gsggdlgcgr gallaqacqd lpsirscylt hcslarasll asqalyrgel
      901 rrvpalllav pkepllptdw pflpliqlyh rasdtpsglp padtvgtalr alqwvlvles
      961 wrpqalwavs paarlarlmc vflvdselfr etpiqrlvaa llarlcqpev lpnlnldcpl
     1021 pgltsfpdly anflehfeav sfgdhlfgal illplqrrfs vtlrlalfge hvgalralgl
     1081 pltqlpvsle cymappednv allqlyfral vtgalrprwc pvlyavavah vnsfifsqdp
     1141 nnsdeikaac rsmlqktwll tdeglrqhll hyklpnsalp egfelypqlp pvrqqylqkl
     1201 risgvlpngv set
//
LOCUS       XP_061013503             461 aa            linear   MAM 02-DEC-2023
DEFINITION  inositol-trisphosphate 3-kinase A [Dama dama].
ACCESSION   XP_061013503
VERSION     XP_061013503.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157520.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..461
                     /product="inositol-trisphosphate 3-kinase A"
                     /calculated_mol_wt=50603
     Region          245..455
                     /region_name="IPK"
                     /note="Inositol polyphosphate kinase; pfam03770"
                     /db_xref="CDD:397715"
     CDS             1..461
                     /gene="ITPKA"
                     /coded_by="XM_061157520.1:1..1386"
                     /db_xref="GeneID:133066433"
ORIGIN      
        1 mtlpggptgm arpggagpcs pgleraprrs vgelrllfea rcaavaaaaa agqprargak
       61 rrggqvpngl prappapvip qltvtaeepd vppaspgppe pegnwlpavg sshlqqprrl
      121 stsslsstgs sslpedsedd llsdsesrsr gnvqleaged vgqkshwqki rtmvnlpvms
      181 pfkkryawvq laghtgsfka agtsglilkr sseperycla rlmadalrgc vpafhgvver
      241 dgesylqlqd lldgfdgpcv ldckmgvrty leeeltkare rpklrkdmyk kmlavdpeap
      301 teeehaqrav tkprymqwre gisssttlgf riegikkadg scstdfkttr sreqvirvfe
      361 efvqgdaevl rrylnrlqqi rdtlevseff rrhevigssl lfvhdhchra gvwlidfgkt
      421 tplpdgqtld hrrpweegnr edgyllgldn ligilaslae r
//
LOCUS       XP_061013504             715 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA polymerase-associated protein RTF1 homolog [Dama dama].
ACCESSION   XP_061013504
VERSION     XP_061013504.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157521.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..715
                     /product="RNA polymerase-associated protein RTF1 homolog"
                     /calculated_mol_wt=80582
     Region          194..628
                     /region_name="COG5296"
                     /note="Transcription factor involved in TATA site
                     selection and in elongation by RNA polymerase II
                     [Transcription]"
                     /db_xref="CDD:227615"
     Region          364..464
                     /region_name="Plus-3"
                     /note="Plus-3 domain; pfam03126"
                     /db_xref="CDD:460817"
     CDS             1..715
                     /gene="RTF1"
                     /coded_by="XM_061157521.1:1..2148"
                     /db_xref="GeneID:133066434"
ORIGIN      
        1 mrgrlcvgra aaaaaaaata avavplaggq egspggvrrg srgttmvkkr kgrvvidsdt
       61 edsgsdenld qellslakrk rsdseekepp vsqpaassds etsnsddewt fgsnknkkkg
      121 karkiekkgt mkkqanktas sgssdkdssa essapeegev sdsdsnssss ssdsdsssed
      181 eefhdgyged lmgdeedrar leqmtekere qelfnriekr evlkkrfeir kklktakkke
      241 kkekkkkqee eqekkkltqi qesqvtshnk errskrdekl dkksqameel kaerekrknr
      301 taellakkqp lktsevysdd eeeeeddkss eksdrssrts ssdeeeekee ippksqpvsl
      361 peelnrvrls rhklerwchm pffaktvtgc fvrigignhn skpvyrvaei tgvvetakvy
      421 qlggtrtnkg lqlrhgsdqr vfrlefvsnq eftesefmkw keamfsagmq lptldeinkk
      481 elsikealny kfndqdieei vkekerfrka ppnyamkktq llkekamaed lgdqdkakqi
      541 qdqlneleer aealdrqrtk nisaisyinq rnrewnives ekalvaeshn mknqqmdpft
      601 rrqckptivs nsrdpavqaa ilaqlnakyg sgvlpdapke mskgqgkdkd lnsksasdls
      661 edlfkvhdfd vkidlqvpss eskalaitsk appakdgapr rslnledykk rrgli
//
LOCUS       XP_061013505             463 aa            linear   MAM 02-DEC-2023
DEFINITION  nucleolar and spindle-associated protein 1 [Dama dama].
ACCESSION   XP_061013505
VERSION     XP_061013505.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157522.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..463
                     /product="nucleolar and spindle-associated protein 1"
                     /calculated_mol_wt=52004
     Region          181..457
                     /region_name="NUSAP"
                     /note="Nucleolar and spindle-associated protein;
                     pfam16006"
                     /db_xref="CDD:464970"
     CDS             1..463
                     /gene="NUSAP1"
                     /coded_by="XM_061157522.1:95..1486"
                     /db_xref="GeneID:133066435"
ORIGIN      
        1 mivpsleeln sfkysdlqnl akslglranl radkllralk ahlknearke nenqdeiqts
       61 afscdeteiq tssqehtere pddhvtktrg rrktvhrspd sqangnvqte kklppvpnlq
      121 nhseikicgp tesqnqekhe sqvlrtavei tsppkenqgd gnavssgkrg lddneeprvp
      181 skrkkslytd gfskpgknkk tasttpnfkk lhearfkeme sidqyverkk kyfeehnsfn
      241 elkrqpvtkg vpatpvparg rlsvactpss qqrsqgrphp grsalcvkgs akhsalsaak
      301 mnvrfsaatk dnehkrsltk tparksphvt msgntpkgqa llgthklktt rgesvavitp
      361 fkltteaaqt psshkkpvfd lkaslsrpln yephkgklkp wgqskennsl hehvsrvsfh
      421 kktykqprlq treeqrkkhe qerkekkekv lgvrrgliia ers
//
LOCUS       XP_061013506             328 aa            linear   MAM 02-DEC-2023
DEFINITION  complex I intermediate-associated protein 30, mitochondrial [Dama
            dama].
ACCESSION   XP_061013506
VERSION     XP_061013506.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157523.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..328
                     /product="complex I intermediate-associated protein 30,
                     mitochondrial"
                     /calculated_mol_wt=37862
     Region          126..299
                     /region_name="CIA30"
                     /note="Complex I intermediate-associated protein 30
                     (CIA30); pfam08547"
                     /db_xref="CDD:462515"
     CDS             1..328
                     /gene="NDUFAF1"
                     /coded_by="XM_061157523.1:237..1223"
                     /db_xref="GeneID:133066437"
ORIGIN      
        1 malvhkllng tyilrkcpkp rvvfcpfwgt hfadycsssf qkpvaapgka ssqrktkgnl
       61 eehhqreval eitspedkpe isfdkaikee mkghfrhlkd divnywigpe grplhevlme
      121 qakvvwqfrs kedldrwtvt sdkaiggrse vflkmgrnnq sallygtlss eapqdgesgr
      181 sgycamvski lrgpfemkrs ydwshfntly lrvrgdgrpw mvniredtdi iqrkdqmysy
      241 fmftrggpyw qevkipfskf ffsnqgrird aqyqlpldki ssigftladk vdgpffleid
      301 figvftdpah teefayensp elnprlfk
//
LOCUS       XP_061013507             328 aa            linear   MAM 02-DEC-2023
DEFINITION  complex I intermediate-associated protein 30, mitochondrial [Dama
            dama].
ACCESSION   XP_061013507
VERSION     XP_061013507.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157524.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..328
                     /product="complex I intermediate-associated protein 30,
                     mitochondrial"
                     /calculated_mol_wt=37862
     Region          126..299
                     /region_name="CIA30"
                     /note="Complex I intermediate-associated protein 30
                     (CIA30); pfam08547"
                     /db_xref="CDD:462515"
     CDS             1..328
                     /gene="NDUFAF1"
                     /coded_by="XM_061157524.1:222..1208"
                     /db_xref="GeneID:133066437"
ORIGIN      
        1 malvhkllng tyilrkcpkp rvvfcpfwgt hfadycsssf qkpvaapgka ssqrktkgnl
       61 eehhqreval eitspedkpe isfdkaikee mkghfrhlkd divnywigpe grplhevlme
      121 qakvvwqfrs kedldrwtvt sdkaiggrse vflkmgrnnq sallygtlss eapqdgesgr
      181 sgycamvski lrgpfemkrs ydwshfntly lrvrgdgrpw mvniredtdi iqrkdqmysy
      241 fmftrggpyw qevkipfskf ffsnqgrird aqyqlpldki ssigftladk vdgpffleid
      301 figvftdpah teefayensp elnprlfk
//
LOCUS       XP_061013508             328 aa            linear   MAM 02-DEC-2023
DEFINITION  complex I intermediate-associated protein 30, mitochondrial [Dama
            dama].
ACCESSION   XP_061013508
VERSION     XP_061013508.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157525.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..328
                     /product="complex I intermediate-associated protein 30,
                     mitochondrial"
                     /calculated_mol_wt=37862
     Region          126..299
                     /region_name="CIA30"
                     /note="Complex I intermediate-associated protein 30
                     (CIA30); pfam08547"
                     /db_xref="CDD:462515"
     CDS             1..328
                     /gene="NDUFAF1"
                     /coded_by="XM_061157525.1:158..1144"
                     /db_xref="GeneID:133066437"
ORIGIN      
        1 malvhkllng tyilrkcpkp rvvfcpfwgt hfadycsssf qkpvaapgka ssqrktkgnl
       61 eehhqreval eitspedkpe isfdkaikee mkghfrhlkd divnywigpe grplhevlme
      121 qakvvwqfrs kedldrwtvt sdkaiggrse vflkmgrnnq sallygtlss eapqdgesgr
      181 sgycamvski lrgpfemkrs ydwshfntly lrvrgdgrpw mvniredtdi iqrkdqmysy
      241 fmftrggpyw qevkipfskf ffsnqgrird aqyqlpldki ssigftladk vdgpffleid
      301 figvftdpah teefayensp elnprlfk
//
LOCUS       XP_061013509             229 aa            linear   MAM 02-DEC-2023
DEFINITION  protein Mis18-beta [Dama dama].
ACCESSION   XP_061013509
VERSION     XP_061013509.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157526.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..229
                     /product="protein Mis18-beta"
                     /calculated_mol_wt=25166
     Region          76..176
                     /region_name="Yippee-Mis18"
                     /note="Yippee zinc-binding/DNA-binding /Mis18, centromere
                     assembly; pfam03226"
                     /db_xref="CDD:427204"
     CDS             1..229
                     /gene="OIP5"
                     /coded_by="XM_061157526.1:28..717"
                     /db_xref="GeneID:133066438"
ORIGIN      
        1 maarprrpls giakqprgdf cdrakkaide pffttsmewd tqvvkgsspv gpaglgleer
       61 psrprlprwl qpercavfqc aqchavlads vhlawdlsrs lgavvfsrvt nnvvleapfl
      121 vgiegslkgs tynllfcssc eipigfhlys thaalaalrg hfclssdkmv cyllktkaii
      181 nasemdihiv plaekvaelk ekimlthtrl nslmkilkev ppdqskltn
//
LOCUS       XP_061013511             158 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein uL23 [Dama dama].
ACCESSION   XP_061013511
VERSION     XP_061013511.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157528.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..158
                     /product="large ribosomal subunit protein uL23"
                     /calculated_mol_wt=17823
     Region          38..158
                     /region_name="PTZ00191"
                     /note="60S ribosomal protein L23a; Provisional"
                     /db_xref="CDD:185507"
     CDS             1..158
                     /gene="LOC133066439"
                     /coded_by="XM_061157528.1:1..477"
                     /db_xref="GeneID:133066439"
ORIGIN      
        1 mkmapkakke apappkaeak akalkakkav lkgvhshkkk kirtsptfrr pktlrlrrqp
       61 kyprksaprr nkldhyaiik fplttesamk kiednntlvf ivdvkankhq ikqavkklyd
      121 idvakvntli rpdgekkayv rlapdydald vankigii
//
LOCUS       XP_061013512             195 aa            linear   MAM 02-DEC-2023
DEFINITION  calcineurin B homologous protein 1 [Dama dama].
ACCESSION   XP_061013512
VERSION     XP_061013512.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157529.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..195
                     /product="calcineurin B homologous protein 1"
                     /calculated_mol_wt=22311
     Region          27..182
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..195
                     /gene="CHP1"
                     /coded_by="XM_061157529.1:244..831"
                     /db_xref="GeneID:133066441"
ORIGIN      
        1 mgsrastllr deeleeikke tgfshsqitr lysrftsldk gengtlsred fqripelain
       61 plgdriinaf fpegedqvnf rgfmrtlahf rpiedneksk dvngpeplns rsnklhfafr
      121 lydldkddki srdellqvlr mmvgvnisde qlgsiadrti qeadqdgdsa isftefvkvl
      181 ekvdveqkms irflh
//
LOCUS       XP_061013513             575 aa            linear   MAM 02-DEC-2023
DEFINITION  piRNA biogenesis protein EXD1 isoform X1 [Dama dama].
ACCESSION   XP_061013513
VERSION     XP_061013513.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157530.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..575
                     /product="piRNA biogenesis protein EXD1 isoform X1"
                     /calculated_mol_wt=64998
     Region          147..349
                     /region_name="Egl_like_exo"
                     /note="DEDDy 3'-5' exonuclease domain of Drosophila
                     Egalitarian (Egl) and similar proteins; cd06148"
                     /db_xref="CDD:99851"
     Site            order(162..165,216..217,219..221,261..262,310,314)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:99851"
     Site            order(162,164,221,310,314)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:99851"
     Site            order(163..165,216..217,219..220,261..262,310,314)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:99851"
     CDS             1..575
                     /gene="EXD1"
                     /coded_by="XM_061157530.1:388..2115"
                     /db_xref="GeneID:133066442"
ORIGIN      
        1 mdlssdyhfl nqilwrrvrl tlvcgifegv lqhvdpdkiv vlkkvknvet glsvpgvkmf
       61 fgheivnvel ldevehgavr ekassvslnt drtkvdtikd edlnvqkpas ptpevpitsl
      121 lsdlkyspse eeevtytvid qfqqkfgaam lhikkqsvls vaaeganvcr hgklcwlqva
      181 tnsrvylfdi fllgsrafnn glqmvledkr ilkvihdcrw lsdclshqyg illnnvfdtq
      241 vadvlqfsve tggflpncis tlqeslirhl kiapkhlsfl evrqrwirvs ikenpelwft
      301 rplspsllki laleatyllp lrlvlldemm sdlttlvdgy lntyregsad rlggmeptcm
      361 elpeellqlq dfqkqrreka akeyrvnaqg llvrtvlhpk ksvtetagke gkvrgfllck
      421 nstqdkapni tshenvnllk eeskskqtrv epqylpptke dasedssynl nypesegvkd
      481 qriaqkehlk ipkqefktsl slkeeieqll mvenkedlkg tkqdvsvsps lpqetrvsps
      541 gifhpfrkav lptlppcpal ektdswlnpd spnlp
//
LOCUS       XP_061013514             575 aa            linear   MAM 02-DEC-2023
DEFINITION  piRNA biogenesis protein EXD1 isoform X1 [Dama dama].
ACCESSION   XP_061013514
VERSION     XP_061013514.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157531.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..575
                     /product="piRNA biogenesis protein EXD1 isoform X1"
                     /calculated_mol_wt=64998
     Region          147..349
                     /region_name="Egl_like_exo"
                     /note="DEDDy 3'-5' exonuclease domain of Drosophila
                     Egalitarian (Egl) and similar proteins; cd06148"
                     /db_xref="CDD:99851"
     Site            order(162..165,216..217,219..221,261..262,310,314)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:99851"
     Site            order(162,164,221,310,314)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:99851"
     Site            order(163..165,216..217,219..220,261..262,310,314)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:99851"
     CDS             1..575
                     /gene="EXD1"
                     /coded_by="XM_061157531.1:537..2264"
                     /db_xref="GeneID:133066442"
ORIGIN      
        1 mdlssdyhfl nqilwrrvrl tlvcgifegv lqhvdpdkiv vlkkvknvet glsvpgvkmf
       61 fgheivnvel ldevehgavr ekassvslnt drtkvdtikd edlnvqkpas ptpevpitsl
      121 lsdlkyspse eeevtytvid qfqqkfgaam lhikkqsvls vaaeganvcr hgklcwlqva
      181 tnsrvylfdi fllgsrafnn glqmvledkr ilkvihdcrw lsdclshqyg illnnvfdtq
      241 vadvlqfsve tggflpncis tlqeslirhl kiapkhlsfl evrqrwirvs ikenpelwft
      301 rplspsllki laleatyllp lrlvlldemm sdlttlvdgy lntyregsad rlggmeptcm
      361 elpeellqlq dfqkqrreka akeyrvnaqg llvrtvlhpk ksvtetagke gkvrgfllck
      421 nstqdkapni tshenvnllk eeskskqtrv epqylpptke dasedssynl nypesegvkd
      481 qriaqkehlk ipkqefktsl slkeeieqll mvenkedlkg tkqdvsvsps lpqetrvsps
      541 gifhpfrkav lptlppcpal ektdswlnpd spnlp
//
LOCUS       XP_061013515             575 aa            linear   MAM 02-DEC-2023
DEFINITION  piRNA biogenesis protein EXD1 isoform X1 [Dama dama].
ACCESSION   XP_061013515
VERSION     XP_061013515.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157532.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..575
                     /product="piRNA biogenesis protein EXD1 isoform X1"
                     /calculated_mol_wt=64998
     Region          147..349
                     /region_name="Egl_like_exo"
                     /note="DEDDy 3'-5' exonuclease domain of Drosophila
                     Egalitarian (Egl) and similar proteins; cd06148"
                     /db_xref="CDD:99851"
     Site            order(162..165,216..217,219..221,261..262,310,314)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:99851"
     Site            order(162,164,221,310,314)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:99851"
     Site            order(163..165,216..217,219..220,261..262,310,314)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:99851"
     CDS             1..575
                     /gene="EXD1"
                     /coded_by="XM_061157532.1:315..2042"
                     /db_xref="GeneID:133066442"
ORIGIN      
        1 mdlssdyhfl nqilwrrvrl tlvcgifegv lqhvdpdkiv vlkkvknvet glsvpgvkmf
       61 fgheivnvel ldevehgavr ekassvslnt drtkvdtikd edlnvqkpas ptpevpitsl
      121 lsdlkyspse eeevtytvid qfqqkfgaam lhikkqsvls vaaeganvcr hgklcwlqva
      181 tnsrvylfdi fllgsrafnn glqmvledkr ilkvihdcrw lsdclshqyg illnnvfdtq
      241 vadvlqfsve tggflpncis tlqeslirhl kiapkhlsfl evrqrwirvs ikenpelwft
      301 rplspsllki laleatyllp lrlvlldemm sdlttlvdgy lntyregsad rlggmeptcm
      361 elpeellqlq dfqkqrreka akeyrvnaqg llvrtvlhpk ksvtetagke gkvrgfllck
      421 nstqdkapni tshenvnllk eeskskqtrv epqylpptke dasedssynl nypesegvkd
      481 qriaqkehlk ipkqefktsl slkeeieqll mvenkedlkg tkqdvsvsps lpqetrvsps
      541 gifhpfrkav lptlppcpal ektdswlnpd spnlp
//
LOCUS       XP_061013516             575 aa            linear   MAM 02-DEC-2023
DEFINITION  piRNA biogenesis protein EXD1 isoform X1 [Dama dama].
ACCESSION   XP_061013516
VERSION     XP_061013516.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157533.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..575
                     /product="piRNA biogenesis protein EXD1 isoform X1"
                     /calculated_mol_wt=64998
     Region          147..349
                     /region_name="Egl_like_exo"
                     /note="DEDDy 3'-5' exonuclease domain of Drosophila
                     Egalitarian (Egl) and similar proteins; cd06148"
                     /db_xref="CDD:99851"
     Site            order(162..165,216..217,219..221,261..262,310,314)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:99851"
     Site            order(162,164,221,310,314)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:99851"
     Site            order(163..165,216..217,219..220,261..262,310,314)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:99851"
     CDS             1..575
                     /gene="EXD1"
                     /coded_by="XM_061157533.1:464..2191"
                     /db_xref="GeneID:133066442"
ORIGIN      
        1 mdlssdyhfl nqilwrrvrl tlvcgifegv lqhvdpdkiv vlkkvknvet glsvpgvkmf
       61 fgheivnvel ldevehgavr ekassvslnt drtkvdtikd edlnvqkpas ptpevpitsl
      121 lsdlkyspse eeevtytvid qfqqkfgaam lhikkqsvls vaaeganvcr hgklcwlqva
      181 tnsrvylfdi fllgsrafnn glqmvledkr ilkvihdcrw lsdclshqyg illnnvfdtq
      241 vadvlqfsve tggflpncis tlqeslirhl kiapkhlsfl evrqrwirvs ikenpelwft
      301 rplspsllki laleatyllp lrlvlldemm sdlttlvdgy lntyregsad rlggmeptcm
      361 elpeellqlq dfqkqrreka akeyrvnaqg llvrtvlhpk ksvtetagke gkvrgfllck
      421 nstqdkapni tshenvnllk eeskskqtrv epqylpptke dasedssynl nypesegvkd
      481 qriaqkehlk ipkqefktsl slkeeieqll mvenkedlkg tkqdvsvsps lpqetrvsps
      541 gifhpfrkav lptlppcpal ektdswlnpd spnlp
//
LOCUS       XP_061013517             575 aa            linear   MAM 02-DEC-2023
DEFINITION  piRNA biogenesis protein EXD1 isoform X1 [Dama dama].
ACCESSION   XP_061013517
VERSION     XP_061013517.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157534.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..575
                     /product="piRNA biogenesis protein EXD1 isoform X1"
                     /calculated_mol_wt=64998
     Region          147..349
                     /region_name="Egl_like_exo"
                     /note="DEDDy 3'-5' exonuclease domain of Drosophila
                     Egalitarian (Egl) and similar proteins; cd06148"
                     /db_xref="CDD:99851"
     Site            order(162..165,216..217,219..221,261..262,310,314)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:99851"
     Site            order(162,164,221,310,314)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:99851"
     Site            order(163..165,216..217,219..220,261..262,310,314)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:99851"
     CDS             1..575
                     /gene="EXD1"
                     /coded_by="XM_061157534.1:268..1995"
                     /db_xref="GeneID:133066442"
ORIGIN      
        1 mdlssdyhfl nqilwrrvrl tlvcgifegv lqhvdpdkiv vlkkvknvet glsvpgvkmf
       61 fgheivnvel ldevehgavr ekassvslnt drtkvdtikd edlnvqkpas ptpevpitsl
      121 lsdlkyspse eeevtytvid qfqqkfgaam lhikkqsvls vaaeganvcr hgklcwlqva
      181 tnsrvylfdi fllgsrafnn glqmvledkr ilkvihdcrw lsdclshqyg illnnvfdtq
      241 vadvlqfsve tggflpncis tlqeslirhl kiapkhlsfl evrqrwirvs ikenpelwft
      301 rplspsllki laleatyllp lrlvlldemm sdlttlvdgy lntyregsad rlggmeptcm
      361 elpeellqlq dfqkqrreka akeyrvnaqg llvrtvlhpk ksvtetagke gkvrgfllck
      421 nstqdkapni tshenvnllk eeskskqtrv epqylpptke dasedssynl nypesegvkd
      481 qriaqkehlk ipkqefktsl slkeeieqll mvenkedlkg tkqdvsvsps lpqetrvsps
      541 gifhpfrkav lptlppcpal ektdswlnpd spnlp
//
LOCUS       XP_061013520             571 aa            linear   MAM 02-DEC-2023
DEFINITION  piRNA biogenesis protein EXD1 isoform X2 [Dama dama].
ACCESSION   XP_061013520
VERSION     XP_061013520.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157537.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..571
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..571
                     /product="piRNA biogenesis protein EXD1 isoform X2"
                     /calculated_mol_wt=64570
     Region          147..345
                     /region_name="Egl_like_exo"
                     /note="DEDDy 3'-5' exonuclease domain of Drosophila
                     Egalitarian (Egl) and similar proteins; cd06148"
                     /db_xref="CDD:99851"
     Site            order(162..165,216..217,219..221,261..262,306,310)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:99851"
     Site            order(162,164,221,306,310)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:99851"
     Site            order(163..165,216..217,219..220,261..262,306,310)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:99851"
     CDS             1..571
                     /gene="EXD1"
                     /coded_by="XM_061157537.1:385..2100"
                     /db_xref="GeneID:133066442"
ORIGIN      
        1 mdlssdyhfl nqilwrrvrl tlvcgifegv lqhvdpdkiv vlkkvknvet glsvpgvkmf
       61 fgheivnvel ldevehgavr ekassvslnt drtkvdtikd edlnvqkpas ptpevpitsl
      121 lsdlkyspse eeevtytvid qfqqkfgaam lhikkqsvls vaaeganvcr hgklcwlqva
      181 tnsrvylfdi fllgsrafnn glqmvledkr ilkvihdcrw lsdclshqyg illnnvfdtq
      241 vadvlqfsve tggflpncis tlqeslirhl kiapkhlsfl evrqrwiren pelwftrpls
      301 psllkilale atyllplrlv lldemmsdlt tlvdgylnty regsadrlgg meptcmelpe
      361 ellqlqdfqk qrrekaakey rvnaqgllvr tvlhpkksvt etagkegkvr gfllcknstq
      421 dkapnitshe nvnllkeesk skqtrvepqy lpptkedase dssynlnype segvkdqria
      481 qkehlkipkq efktslslke eieqllmven kedlkgtkqd vsvspslpqe trvspsgifh
      541 pfrkavlptl ppcpalektd swlnpdspnl p
//
LOCUS       XP_061013521             523 aa            linear   MAM 02-DEC-2023
DEFINITION  piRNA biogenesis protein EXD1 isoform X3 [Dama dama].
ACCESSION   XP_061013521
VERSION     XP_061013521.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157538.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..523
                     /product="piRNA biogenesis protein EXD1 isoform X3"
                     /calculated_mol_wt=59041
     Region          147..297
                     /region_name="Egl_like_exo"
                     /note="DEDDy 3'-5' exonuclease domain of Drosophila
                     Egalitarian (Egl) and similar proteins; cd06148"
                     /db_xref="CDD:99851"
     Site            order(162..165,216..217,219..221,258,262)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:99851"
     Site            order(162,164,221,258,262)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:99851"
     Site            order(163..165,216..217,219..220,258,262)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:99851"
     CDS             1..523
                     /gene="EXD1"
                     /coded_by="XM_061157538.1:388..1959"
                     /db_xref="GeneID:133066442"
ORIGIN      
        1 mdlssdyhfl nqilwrrvrl tlvcgifegv lqhvdpdkiv vlkkvknvet glsvpgvkmf
       61 fgheivnvel ldevehgavr ekassvslnt drtkvdtikd edlnvqkpas ptpevpitsl
      121 lsdlkyspse eeevtytvid qfqqkfgaam lhikkqsvls vaaeganvcr hgklcwlqva
      181 tnsrvylfdi fllgsrafnn glqmvledkr ilkvihdcrw lsdclshqyg illnnvfdtq
      241 enpelwftrp lspsllkila leatyllplr lvlldemmsd lttlvdgyln tyregsadrl
      301 ggmeptcmel peellqlqdf qkqrrekaak eyrvnaqgll vrtvlhpkks vtetagkegk
      361 vrgfllckns tqdkapnits henvnllkee skskqtrvep qylpptkeda sedssynlny
      421 pesegvkdqr iaqkehlkip kqefktslsl keeieqllmv enkedlkgtk qdvsvspslp
      481 qetrvspsgi fhpfrkavlp tlppcpalek tdswlnpdsp nlp
//
LOCUS       XP_061013522            1566 aa            linear   MAM 02-DEC-2023
DEFINITION  chromatin-remodeling ATPase INO80 isoform X1 [Dama dama].
ACCESSION   XP_061013522
VERSION     XP_061013522.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157539.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1566
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1566
                     /product="chromatin-remodeling ATPase INO80 isoform X1"
                     /calculated_mol_wt=177736
     Region          307..>839
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
     Region          527..755
                     /region_name="DEXQc_INO80"
                     /note="DEAQ-box helicase domain of INO80; cd18002"
                     /db_xref="CDD:350760"
     Site            order(554..560,594,661..662)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350760"
     Region          1100..1235
                     /region_name="SF2_C_SNF"
                     /note="C-terminal helicase domain of the SNF family
                     helicases; cd18793"
                     /db_xref="CDD:350180"
     Site            order(1136..1137,1145,1187,1208..1209)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350180"
     Site            order(1193..1194,1196,1219,1222)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350180"
     CDS             1..1566
                     /gene="INO80"
                     /coded_by="XM_061157539.1:58..4758"
                     /db_xref="GeneID:133066443"
ORIGIN      
        1 maselgagdd ggctelakpl ylqyleralr ldhflrqtsa ifnrnissde sedglddsnp
       61 llpqsgdpli qvkeeppnsl lgetsgasns emlntyslng vlqseskfdk gnlynfsklk
      121 ksrkwlksil lsdesseads hsedndeeed ddddeeeels lnredlhnml rlhkykklhq
      181 nkyskekelq qyqyysagll stydpfyeqq rhllgpkkkk fkeekklkak lkkvkkkrrr
      241 deelsseesp rrhhhqtkvf akfshdappp gtkkkhlsie qlnarrrkvw lsivkkelpk
      301 ankqkasarn lfltnsrkla hqcmkevrra alqaqkncke tlprarrltk emllywkkye
      361 kvekehrkra ekealeqrkl deemreakrq qrklnflitq telyahfmsr krdmghdgiq
      421 eeilrkleds saqrqidigg gvvvnitqed ydsnhfkaqa lknaenayhi hqartrsfde
      481 dakesraaal raanksgtgf gesyslanps iragedipqp tifngklkgy qlkgmnwlan
      541 lyeqgingil ademglgktv qsiallahla ereniwgpfl iispastlnn whqeftrfvp
      601 kfkvlpywgn phdrkvirrf wsqktlytqd apfhvvitsy qlvvqdvkyf qrvkwqymvl
      661 deaqalksss svrwkillqf qcrnrllltg tpiqntmael wallhfimpt lfdsheefne
      721 wfskdiesha enksaidenq lsrlhmilkp fmlrrikkdv enelsdkiei lmycqltsrq
      781 kllyqalknk isiedllqss mgstqqaqtt tsslmnlvmq frkvcnhpel ferqetwspf
      841 hislkpyqis kfiyrhgqir vfnhsrdrwl rvflspfapd yiqqslfhrk gvneescfsf
      901 lrfidvspae manlmlqgll arwlalflsl kasyrlhqlr swgepegesq ekylrnkdfl
      961 lgvnfplsfp nlsscpllks lvfsshckav sgysdqvihq rrsatsslrc clltelpsfl
     1021 cvasprvtav pldsycndrs aeyerrvlke ggslaakqcl lngapelaad wlnrrsqffp
     1081 epagglwsir pqngwsfiri pgkeslitds gklyaldvll trlksqghrv liysqmtrmi
     1141 dlleeymvyr khtymrldgs skiserrdmv adfqtrndif vfllstragg lginltaadt
     1201 vifydsdwnp tvdqqamdra hrlgqtkqvt vyrlickgti eerilqrake kseiqrmvis
     1261 ggnfkpdtlk pkevvsllld deelekklrl rqeekrqqee tnrvkerkrk rekyaekkkk
     1321 edeldgkrrk egmnlvipfv psadnsnlsa dgddsfisvd sampspfsei sisselhtgs
     1381 ippdesssdm lvivddpass apqsratnsp asitgsvsdt vngisiqemp aagrghsars
     1441 rgrpkgsgst akgagkgrsr kstagsaaam agakagaaaa saaayaaygy nvskgisass
     1501 plqtslvrpa gladfgpssa ssplssplgk gnnvpgtpks lhltsslasd slirkqgkgt
     1561 npsggr
//
LOCUS       XP_061013523            1566 aa            linear   MAM 02-DEC-2023
DEFINITION  chromatin-remodeling ATPase INO80 isoform X1 [Dama dama].
ACCESSION   XP_061013523
VERSION     XP_061013523.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157540.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1566
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1566
                     /product="chromatin-remodeling ATPase INO80 isoform X1"
                     /calculated_mol_wt=177736
     Region          307..>839
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
     Region          527..755
                     /region_name="DEXQc_INO80"
                     /note="DEAQ-box helicase domain of INO80; cd18002"
                     /db_xref="CDD:350760"
     Site            order(554..560,594,661..662)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350760"
     Region          1100..1235
                     /region_name="SF2_C_SNF"
                     /note="C-terminal helicase domain of the SNF family
                     helicases; cd18793"
                     /db_xref="CDD:350180"
     Site            order(1136..1137,1145,1187,1208..1209)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350180"
     Site            order(1193..1194,1196,1219,1222)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350180"
     CDS             1..1566
                     /gene="INO80"
                     /coded_by="XM_061157540.1:61..4761"
                     /db_xref="GeneID:133066443"
ORIGIN      
        1 maselgagdd ggctelakpl ylqyleralr ldhflrqtsa ifnrnissde sedglddsnp
       61 llpqsgdpli qvkeeppnsl lgetsgasns emlntyslng vlqseskfdk gnlynfsklk
      121 ksrkwlksil lsdesseads hsedndeeed ddddeeeels lnredlhnml rlhkykklhq
      181 nkyskekelq qyqyysagll stydpfyeqq rhllgpkkkk fkeekklkak lkkvkkkrrr
      241 deelsseesp rrhhhqtkvf akfshdappp gtkkkhlsie qlnarrrkvw lsivkkelpk
      301 ankqkasarn lfltnsrkla hqcmkevrra alqaqkncke tlprarrltk emllywkkye
      361 kvekehrkra ekealeqrkl deemreakrq qrklnflitq telyahfmsr krdmghdgiq
      421 eeilrkleds saqrqidigg gvvvnitqed ydsnhfkaqa lknaenayhi hqartrsfde
      481 dakesraaal raanksgtgf gesyslanps iragedipqp tifngklkgy qlkgmnwlan
      541 lyeqgingil ademglgktv qsiallahla ereniwgpfl iispastlnn whqeftrfvp
      601 kfkvlpywgn phdrkvirrf wsqktlytqd apfhvvitsy qlvvqdvkyf qrvkwqymvl
      661 deaqalksss svrwkillqf qcrnrllltg tpiqntmael wallhfimpt lfdsheefne
      721 wfskdiesha enksaidenq lsrlhmilkp fmlrrikkdv enelsdkiei lmycqltsrq
      781 kllyqalknk isiedllqss mgstqqaqtt tsslmnlvmq frkvcnhpel ferqetwspf
      841 hislkpyqis kfiyrhgqir vfnhsrdrwl rvflspfapd yiqqslfhrk gvneescfsf
      901 lrfidvspae manlmlqgll arwlalflsl kasyrlhqlr swgepegesq ekylrnkdfl
      961 lgvnfplsfp nlsscpllks lvfsshckav sgysdqvihq rrsatsslrc clltelpsfl
     1021 cvasprvtav pldsycndrs aeyerrvlke ggslaakqcl lngapelaad wlnrrsqffp
     1081 epagglwsir pqngwsfiri pgkeslitds gklyaldvll trlksqghrv liysqmtrmi
     1141 dlleeymvyr khtymrldgs skiserrdmv adfqtrndif vfllstragg lginltaadt
     1201 vifydsdwnp tvdqqamdra hrlgqtkqvt vyrlickgti eerilqrake kseiqrmvis
     1261 ggnfkpdtlk pkevvsllld deelekklrl rqeekrqqee tnrvkerkrk rekyaekkkk
     1321 edeldgkrrk egmnlvipfv psadnsnlsa dgddsfisvd sampspfsei sisselhtgs
     1381 ippdesssdm lvivddpass apqsratnsp asitgsvsdt vngisiqemp aagrghsars
     1441 rgrpkgsgst akgagkgrsr kstagsaaam agakagaaaa saaayaaygy nvskgisass
     1501 plqtslvrpa gladfgpssa ssplssplgk gnnvpgtpks lhltsslasd slirkqgkgt
     1561 npsggr
//
LOCUS       XP_061013524            1565 aa            linear   MAM 02-DEC-2023
DEFINITION  chromatin-remodeling ATPase INO80 isoform X2 [Dama dama].
ACCESSION   XP_061013524
VERSION     XP_061013524.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157541.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1565
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1565
                     /product="chromatin-remodeling ATPase INO80 isoform X2"
                     /calculated_mol_wt=177608
     Region          307..>839
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
     Region          527..755
                     /region_name="DEXQc_INO80"
                     /note="DEAQ-box helicase domain of INO80; cd18002"
                     /db_xref="CDD:350760"
     Site            order(554..560,594,661..662)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350760"
     Region          1100..1235
                     /region_name="SF2_C_SNF"
                     /note="C-terminal helicase domain of the SNF family
                     helicases; cd18793"
                     /db_xref="CDD:350180"
     Site            order(1136..1137,1145,1187,1208..1209)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350180"
     Site            order(1193..1194,1196,1219,1222)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350180"
     Region          <1282..>1330
                     /region_name="MAP7"
                     /note="MAP7 (E-MAP-115) family; pfam05672"
                     /db_xref="CDD:461709"
     CDS             1..1565
                     /gene="INO80"
                     /coded_by="XM_061157541.1:59..4756"
                     /db_xref="GeneID:133066443"
ORIGIN      
        1 maselgagdd ggctelakpl ylqyleralr ldhflrqtsa ifnrnissde sedglddsnp
       61 llpqsgdpli qvkeeppnsl lgetsgasns emlntyslng vlqseskfdk gnlynfsklk
      121 ksrkwlksil lsdesseads hsedndeeed ddddeeeels lnredlhnml rlhkykklhq
      181 nkyskekelq qyqyysagll stydpfyeqq rhllgpkkkk fkeekklkak lkkvkkkrrr
      241 deelsseesp rrhhhqtkvf akfshdappp gtkkkhlsie qlnarrrkvw lsivkkelpk
      301 ankqkasarn lfltnsrkla hqcmkevrra alqaqkncke tlprarrltk emllywkkye
      361 kvekehrkra ekealeqrkl deemreakrq qrklnflitq telyahfmsr krdmghdgiq
      421 eeilrkleds saqrqidigg gvvvnitqed ydsnhfkaqa lknaenayhi hqartrsfde
      481 dakesraaal raanksgtgf gesyslanps iragedipqp tifngklkgy qlkgmnwlan
      541 lyeqgingil ademglgktv qsiallahla ereniwgpfl iispastlnn whqeftrfvp
      601 kfkvlpywgn phdrkvirrf wsqktlytqd apfhvvitsy qlvvqdvkyf qrvkwqymvl
      661 deaqalksss svrwkillqf qcrnrllltg tpiqntmael wallhfimpt lfdsheefne
      721 wfskdiesha enksaidenq lsrlhmilkp fmlrrikkdv enelsdkiei lmycqltsrq
      781 kllyqalknk isiedllqss mgstqqaqtt tsslmnlvmq frkvcnhpel ferqetwspf
      841 hislkpyqis kfiyrhgqir vfnhsrdrwl rvflspfapd yiqqslfhrk gvneescfsf
      901 lrfidvspae manlmlqgll arwlalflsl kasyrlhqlr swgepegesq ekylrnkdfl
      961 lgvnfplsfp nlsscpllks lvfsshckav sgysdqvihq rrsatsslrc clltelpsfl
     1021 cvasprvtav pldsycndrs aeyerrvlke ggslaakqcl lngapelaad wlnrrsqffp
     1081 epagglwsir pqngwsfiri pgkeslitds gklyaldvll trlksqghrv liysqmtrmi
     1141 dlleeymvyr khtymrldgs skiserrdmv adfqtrndif vfllstragg lginltaadt
     1201 vifydsdwnp tvdqqamdra hrlgqtkqvt vyrlickgti eerilqrake kseiqrmvis
     1261 ggnfkpdtlk pkevvsllld deelekklrl rqeekrqqee tnrvkerkrk rekyaekkke
     1321 deldgkrrke gmnlvipfvp sadnsnlsad gddsfisvds ampspfseis isselhtgsi
     1381 ppdesssdml vivddpassa pqsratnspa sitgsvsdtv ngisiqempa agrghsarsr
     1441 grpkgsgsta kgagkgrsrk stagsaaama gakagaaaas aaayaaygyn vskgisassp
     1501 lqtslvrpag ladfgpssas splssplgkg nnvpgtpksl hltsslasds lirkqgkgtn
     1561 psggr
//
LOCUS       XP_061013525             219 aa            linear   MAM 02-DEC-2023
DEFINITION  glutathione-specific gamma-glutamylcyclotransferase 1 [Dama dama].
ACCESSION   XP_061013525
VERSION     XP_061013525.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157542.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..219
                     /product="glutathione-specific
                     gamma-glutamylcyclotransferase 1"
                     /calculated_mol_wt=24017
     Region          30..204
                     /region_name="ChaC"
                     /note="ChaC-like protein; pfam04752"
                     /db_xref="CDD:398428"
     Site            order(32,35,37..38,111..112,118,142)
                     /site_type="active"
                     /note="putative active site pocket [active]"
                     /db_xref="CDD:119400"
     Site            order(82..83,85,118..122,124,138,141)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:119400"
     Site            112
                     /site_type="active"
                     /note="putative catalytic residue [active]"
                     /db_xref="CDD:119400"
     CDS             1..219
                     /gene="CHAC1"
                     /coded_by="XM_061157542.1:148..807"
                     /db_xref="GeneID:133066444"
ORIGIN      
        1 mkqepaaqns ppasppssqp lseeddpqal wifgygslvw rpdfaysdsr vgfvrgysrr
       61 fwqgdtfhrg sdkmpgrvvt lledregctw gvayqvqgeq vsealkylnv reavlggydt
      121 kevtfypqdt pdqplkalay vatpqnpgyl gpapeeaiat qilacrgfsg hnleyllrla
      181 dfmqlcgpqa qdehlaaivd avgtmlpcfc pteqalalv
//
LOCUS       XP_061013526             685 aa            linear   MAM 02-DEC-2023
DEFINITION  delta-like protein 4 [Dama dama].
ACCESSION   XP_061013526
VERSION     XP_061013526.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157543.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..685
                     /product="delta-like protein 4"
                     /calculated_mol_wt=74329
     Region          27..173
                     /region_name="MNNL"
                     /note="N terminus of Notch ligand C2-like domain;
                     pfam07657"
                     /db_xref="CDD:462222"
     Region          175..220
                     /region_name="DSL"
                     /note="Delta serrate ligand; pfam01414"
                     /db_xref="CDD:460202"
     Region          284..322
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(284,287,302)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          327..360
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          <369..400
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          403..438
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          440..476
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(440,443,457)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..685
                     /gene="DLL4"
                     /coded_by="XM_061157543.1:377..2434"
                     /db_xref="GeneID:133066445"
ORIGIN      
        1 mavasrrasg wallllvalw qqpaagsgvf qlqlqefane rgvlasgrpc epgcrtffrv
       61 clkhfqavvs pgpctfgsvs tpvlgtnsfa vgddssgggr nplqlpfnft wpgtfsliie
      121 awhapgddlr pealppdali skiaiqgsla vgqnwlldeq tspltrlrys yrvicsdnyy
      181 gdscsrlckk rndhfghyvc qpdgslsclp gwtgeyceqp iclsgcheqn gycskpaeci
      241 crpgwqgrlc neciphngcr hgtcstpwqc tcdegwgglf cdqdlnycth hspckngatc
      301 snsgqrsytc tcrpgytgvd celelsecds npcrnggsck dqedgyhclc ppgyyglhce
      361 hstlscadsp cfnggscrer nqgtsyacec ppnftgsnce kkvdrctsnp canggqclnr
      421 gpnrmcrcrp gftgvhcein isdcarspcv hggtchdlen gfvctcpagf sgrrcevrmp
      481 veacasgpcf ngatcytglp pdnfvcncpy gfmgsrcefp msmppsfpwv avslgvglvv
      541 vlvllcmvav avrqlrlrrp dggsreamnn lsdfqkdnli ptaqlkntnq kkelevdcgl
      601 dksncgkqqn htldynlapg llgrgilpgk yshsdkslge kaplrihsek pecrisaics
      661 prdsmyqsvc liseernecv iatev
//
LOCUS       XP_061013527             973 aa            linear   MAM 02-DEC-2023
DEFINITION  vacuolar protein sorting-associated protein 18 homolog [Dama dama].
ACCESSION   XP_061013527
VERSION     XP_061013527.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157544.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..973
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..973
                     /product="vacuolar protein sorting-associated protein 18
                     homolog"
                     /calculated_mol_wt=109969
     Region          291..434
                     /region_name="Pep3_Vps18"
                     /note="Pep3/Vps18/deep orange family; pfam05131"
                     /db_xref="CDD:461557"
     Region          615..743
                     /region_name="Clathrin"
                     /note="Region in Clathrin and VPS; pfam00637"
                     /db_xref="CDD:459884"
     Region          851..949
                     /region_name="RING-H2_Vps18"
                     /note="RING finger, H2 subclass, found in vacuolar protein
                     sorting-associated protein 18 (Vps18) and similar
                     proteins; cd16689"
                     /db_xref="CDD:438350"
     CDS             1..973
                     /gene="VPS18"
                     /coded_by="XM_061157544.1:336..3257"
                     /db_xref="GeneID:133066446"
ORIGIN      
        1 masildeyed slsrstvlqp gcpsvgiphs gyvnaqleke apiftkqrid ftpseritsl
       61 vvscnqlcms lgkdtllrid lgkanepnhm elgrkddakv hkmfldptgs hllialsste
      121 vlyvnrngqk vrplarwkgq lvesvgwnka lgtesstgpi lvgtaqgqif eaelsasegg
      181 lfgpapdlyf rplyvlneeg gpapvcslea ergpegrgfv iattrqrlfq figrvaegae
      241 aqgfsglfaa yadhpppfre fpsslgysel afytpklrsa prafawmmgd gvlygsldcg
      301 rpdsllseer vweypegvgp gaspplaivl tqfhflllla drveavctlt gqvvlrdhfl
      361 ekfgplkhmv kdsstghlwa hteravfryh vqreardvwr tyldmnrfdl akeycrerpd
      421 cldtvlarea dfcfrqrryl esarcyaltq syfeeialkf learqeeala eflqrklanl
      481 kpaertqatl ltawltelyl srlgalqgdp dalnlyretr erfrsflssp rhkewlfasr
      541 asihellash gdtehmvyfa vimqdyervv ayhcqheaye ealavlarhr dpqlfykfsp
      601 ilirhiprql vdawiemgsr ldarqlipal vnysqggeaq qvsqairyme fcvnvlgete
      661 qaihnyllsl yargqpasll ayleqagasp hrvhydlkya lrlcaehghh racvhvykvl
      721 elyeeavdla lqvdvdlakq cadlpeedee lrkklwlkia rhvvqeeedv qtamaclasc
      781 pllkiedvlp ffpdfvtidh fkeaicsslk aynhhiqelq remeeatasa qrirrdlqel
      841 rgrygtvepq dkcatcdfpl lnrpfylflc ghmfhadcll qavrpglpay kqarleelqr
      901 klgaapppak gsarakeaeg gtaaggpsre qlkadldelv aaecvycgel mirsidrpfi
      961 dpqryeeehl swl
//
LOCUS       XP_061013529             236 aa            linear   MAM 02-DEC-2023
DEFINITION  rho-related GTP-binding protein RhoV [Dama dama].
ACCESSION   XP_061013529
VERSION     XP_061013529.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157546.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..236
                     /product="rho-related GTP-binding protein RhoV"
                     /calculated_mol_wt=25904
     Region          32..205
                     /region_name="Wrch_1"
                     /note="Wnt-1 responsive Cdc42 homolog (Wrch-1) is a Rho
                     family GTPase similar to Cdc42; cd04130"
                     /db_xref="CDD:133330"
     Site            order(33,63..64,66..67,69,71,80,84..85,87..89,95,98)
                     /site_type="other"
                     /note="putative GEF (guanine nucleotide exchange factor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:133330"
     Site            38..45
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:133330"
     Site            order(41..46,85..86,88,144,146,188..189)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:133330"
     Site            62..68
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:133330"
     Site            63
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:133330"
     Site            order(64,87,95,97)
                     /site_type="active"
                     /note="putative GDI (guanine nucleotide dissociation
                     inhibitor) interaction [active]"
                     /db_xref="CDD:133330"
     Site            order(64..65,89,95)
                     /site_type="other"
                     /note="putative GAP (GTPase-activating protein)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:133330"
     Site            order(65..66,95,98)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:133330"
     Site            85..88
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:133330"
     Site            order(88..89,95..98,103..105)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:133330"
     Site            143..146
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:133330"
     Site            187..189
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:133330"
     CDS             1..236
                     /gene="RHOV"
                     /coded_by="XM_061157546.1:103..813"
                     /db_xref="GeneID:133066447"
ORIGIN      
        1 mpprelsete ssplrsptpp pgrgsaspel gikcvlvgdg avgksslivs ytcngypary
       61 rptaldtfsv qvlvdgapvr ielwdtagqe dfdrlrslcy pdtdvflacf svvqpssfqn
      121 itekwlpeir thnpqapvll vgtqadlrdd vnvliqldqg gregpvpqpq aqglaekira
      181 ccylecsalt qknlkevfds ailsaiehka rlekklnakg vrtlsrcrwk kffcfv
//
LOCUS       XP_061013530             523 aa            linear   MAM 02-DEC-2023
DEFINITION  kunitz-type protease inhibitor 1 isoform X1 [Dama dama].
ACCESSION   XP_061013530
VERSION     XP_061013530.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157547.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..523
                     /product="kunitz-type protease inhibitor 1 isoform X1"
                     /calculated_mol_wt=58013
     Region          42..133
                     /region_name="MANEC"
                     /note="MANEC domain; pfam07502"
                     /db_xref="CDD:462186"
     Region          239..297
                     /region_name="Kunitz_HAI1_1-like"
                     /note="Kunitz domain 1 of hepatocyte growth factor
                     activator inhibitor-1 (HAI-1); cd22623"
                     /db_xref="CDD:438666"
     Site            order(250..259,273,275,277..278,280,283,285)
                     /site_type="other"
                     /note="serine protease binding site [polypeptide binding]"
                     /db_xref="CDD:438666"
     Region          329..363
                     /region_name="LDLa"
                     /note="Low Density Lipoprotein Receptor Class A domain, a
                     cysteine-rich repeat that plays a central role in
                     mammalian cholesterol metabolism; the receptor protein
                     binds LDL and transports it into cells by endocytosis; 7
                     successive cysteine-rich repeats of about...; cd00112"
                     /db_xref="CDD:238060"
     Site            order(334,342,353..354)
                     /site_type="active"
                     /note="putative binding surface [active]"
                     /db_xref="CDD:238060"
     Site            order(346,349,353,359..360)
                     /site_type="other"
                     /note="calcium-binding site [ion binding]"
                     /db_xref="CDD:238060"
     Site            356..360
                     /site_type="other"
                     /note="D-X-S-D-E motif"
                     /db_xref="CDD:238060"
     Region          384..444
                     /region_name="Kunitz_HAI1_2-like"
                     /note="Kunitz domain 2 of hepatocyte growth factor
                     activator inhibitor-1 (HAI1); cd22624"
                     /db_xref="CDD:438667"
     Site            order(391..395,397..399,414,418)
                     /site_type="other"
                     /note="putative serine protease binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438667"
     CDS             1..523
                     /gene="SPINT1"
                     /coded_by="XM_061157547.1:242..1813"
                     /db_xref="GeneID:133066448"
ORIGIN      
        1 maggrlsqar ipavavwflc alvlrgaeag pppvtpgllt adgclnrftp gvpdfvldtd
       61 asvrngatfl rsltarrgrd cvhaccssnd cnlalvelqp dggedaivsc flinclyeqs
      121 fvckfapreg finyltrevy rsyrelrtqg frgsripkaw dgidlkvqpq eplvlkgvdn
      181 tdwhllrgdt dvrvernspd qvelwglkeg sylfqltaag sdqpestsnv tvtvlspeqt
      241 eehclaskkv grcrgsfprw yydpteqick sfvyggclgn knnylreeec klacrdvqgg
      301 plrssvgaqv tfpqgpsaer hhpvcsgsch pskfrcgdgc cidsflecdd tpdcpdasde
      361 atcekyttdf dklqrihfpr dkghcvdlpd tghcsesipr wyynpftehc arftyggcyg
      421 nknnfeeeeq clescrgisk kdvfglrres pvpstgsvev avaallgtci vvvvailgyc
      481 ffknqrkdfh rhrhpppstp tsskvsttdd mehlvyyqtt rpl
//
LOCUS       XP_061013531             523 aa            linear   MAM 02-DEC-2023
DEFINITION  kunitz-type protease inhibitor 1 isoform X1 [Dama dama].
ACCESSION   XP_061013531
VERSION     XP_061013531.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157548.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..523
                     /product="kunitz-type protease inhibitor 1 isoform X1"
                     /calculated_mol_wt=58013
     Region          42..133
                     /region_name="MANEC"
                     /note="MANEC domain; pfam07502"
                     /db_xref="CDD:462186"
     Region          239..297
                     /region_name="Kunitz_HAI1_1-like"
                     /note="Kunitz domain 1 of hepatocyte growth factor
                     activator inhibitor-1 (HAI-1); cd22623"
                     /db_xref="CDD:438666"
     Site            order(250..259,273,275,277..278,280,283,285)
                     /site_type="other"
                     /note="serine protease binding site [polypeptide binding]"
                     /db_xref="CDD:438666"
     Region          329..363
                     /region_name="LDLa"
                     /note="Low Density Lipoprotein Receptor Class A domain, a
                     cysteine-rich repeat that plays a central role in
                     mammalian cholesterol metabolism; the receptor protein
                     binds LDL and transports it into cells by endocytosis; 7
                     successive cysteine-rich repeats of about...; cd00112"
                     /db_xref="CDD:238060"
     Site            order(334,342,353..354)
                     /site_type="active"
                     /note="putative binding surface [active]"
                     /db_xref="CDD:238060"
     Site            order(346,349,353,359..360)
                     /site_type="other"
                     /note="calcium-binding site [ion binding]"
                     /db_xref="CDD:238060"
     Site            356..360
                     /site_type="other"
                     /note="D-X-S-D-E motif"
                     /db_xref="CDD:238060"
     Region          384..444
                     /region_name="Kunitz_HAI1_2-like"
                     /note="Kunitz domain 2 of hepatocyte growth factor
                     activator inhibitor-1 (HAI1); cd22624"
                     /db_xref="CDD:438667"
     Site            order(391..395,397..399,414,418)
                     /site_type="other"
                     /note="putative serine protease binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438667"
     CDS             1..523
                     /gene="SPINT1"
                     /coded_by="XM_061157548.1:295..1866"
                     /db_xref="GeneID:133066448"
ORIGIN      
        1 maggrlsqar ipavavwflc alvlrgaeag pppvtpgllt adgclnrftp gvpdfvldtd
       61 asvrngatfl rsltarrgrd cvhaccssnd cnlalvelqp dggedaivsc flinclyeqs
      121 fvckfapreg finyltrevy rsyrelrtqg frgsripkaw dgidlkvqpq eplvlkgvdn
      181 tdwhllrgdt dvrvernspd qvelwglkeg sylfqltaag sdqpestsnv tvtvlspeqt
      241 eehclaskkv grcrgsfprw yydpteqick sfvyggclgn knnylreeec klacrdvqgg
      301 plrssvgaqv tfpqgpsaer hhpvcsgsch pskfrcgdgc cidsflecdd tpdcpdasde
      361 atcekyttdf dklqrihfpr dkghcvdlpd tghcsesipr wyynpftehc arftyggcyg
      421 nknnfeeeeq clescrgisk kdvfglrres pvpstgsvev avaallgtci vvvvailgyc
      481 ffknqrkdfh rhrhpppstp tsskvsttdd mehlvyyqtt rpl
//
LOCUS       XP_061013532             507 aa            linear   MAM 02-DEC-2023
DEFINITION  kunitz-type protease inhibitor 1 isoform X2 [Dama dama].
ACCESSION   XP_061013532
VERSION     XP_061013532.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157549.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..507
                     /product="kunitz-type protease inhibitor 1 isoform X2"
                     /calculated_mol_wt=56430
     Region          42..133
                     /region_name="MANEC"
                     /note="MANEC domain; pfam07502"
                     /db_xref="CDD:462186"
     Region          239..297
                     /region_name="Kunitz_HAI1_1-like"
                     /note="Kunitz domain 1 of hepatocyte growth factor
                     activator inhibitor-1 (HAI-1); cd22623"
                     /db_xref="CDD:438666"
     Site            order(250..259,273,275,277..278,280,283,285)
                     /site_type="other"
                     /note="serine protease binding site [polypeptide binding]"
                     /db_xref="CDD:438666"
     Region          313..347
                     /region_name="LDLa"
                     /note="Low Density Lipoprotein Receptor Class A domain, a
                     cysteine-rich repeat that plays a central role in
                     mammalian cholesterol metabolism; the receptor protein
                     binds LDL and transports it into cells by endocytosis; 7
                     successive cysteine-rich repeats of about...; cd00112"
                     /db_xref="CDD:238060"
     Site            order(318,326,337..338)
                     /site_type="active"
                     /note="putative binding surface [active]"
                     /db_xref="CDD:238060"
     Site            order(330,333,337,343..344)
                     /site_type="other"
                     /note="calcium-binding site [ion binding]"
                     /db_xref="CDD:238060"
     Site            340..344
                     /site_type="other"
                     /note="D-X-S-D-E motif"
                     /db_xref="CDD:238060"
     Region          368..428
                     /region_name="Kunitz_HAI1_2-like"
                     /note="Kunitz domain 2 of hepatocyte growth factor
                     activator inhibitor-1 (HAI1); cd22624"
                     /db_xref="CDD:438667"
     Site            order(375..379,381..383,398,402)
                     /site_type="other"
                     /note="putative serine protease binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438667"
     CDS             1..507
                     /gene="SPINT1"
                     /coded_by="XM_061157549.1:242..1765"
                     /db_xref="GeneID:133066448"
ORIGIN      
        1 maggrlsqar ipavavwflc alvlrgaeag pppvtpgllt adgclnrftp gvpdfvldtd
       61 asvrngatfl rsltarrgrd cvhaccssnd cnlalvelqp dggedaivsc flinclyeqs
      121 fvckfapreg finyltrevy rsyrelrtqg frgsripkaw dgidlkvqpq eplvlkgvdn
      181 tdwhllrgdt dvrvernspd qvelwglkeg sylfqltaag sdqpestsnv tvtvlspeqt
      241 eehclaskkv grcrgsfprw yydpteqick sfvyggclgn knnylreeec klacrdvqgp
      301 saerhhpvcs gschpskfrc gdgccidsfl ecddtpdcpd asdeatceky ttdfdklqri
      361 hfprdkghcv dlpdtghcse siprwyynpf tehcarftyg gcygnknnfe eeeqclescr
      421 giskkdvfgl rrespvpstg svevavaall gtcivvvvai lgycffknqr kdfhrhrhpp
      481 pstptsskvs ttddmehlvy yqttrpl
//
LOCUS       XP_061013533             474 aa            linear   MAM 02-DEC-2023
DEFINITION  regulator of microtubule dynamics protein 3 isoform X1 [Dama dama].
ACCESSION   XP_061013533
VERSION     XP_061013533.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157550.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..474
                     /product="regulator of microtubule dynamics protein 3
                     isoform X1"
                     /calculated_mol_wt=52150
     Region          229..>451
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          366..416
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          421..450
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..474
                     /gene="RMDN3"
                     /coded_by="XM_061157550.1:160..1584"
                     /db_xref="GeneID:133066449"
ORIGIN      
        1 msslgtlgga raglglllgt aaglgflcal ysqrwkrtqr rgqsqsrsns ldytqtsepg
       61 rqvrplravp geagdaavlp slprgqeevl drlefvltsl valrreveel rsslqglagq
      121 ivgevrshme enqkvarrrr fpfarersds tgsssvyfta tsgatftdae seggyttana
      181 esdyerdser esdgdgedev scetvkmgrk dsldleveve vvlgpepeal eaggspgqed
      241 vlpllqqade lhqgseqgkr egfqlllnnk laqhgsrqdf lwrlaraysd mcelaeease
      301 krsyalsgke aaevalekgn enaechqwya vlcgqlaehe giqrriqsgf sfkehvdkai
      361 alkpenpmah fllgrwcyqv shlswlekkt atalsesplg atvqdalssf lkaeelqpgf
      421 skagriyick cykelgknpe akqwmklale lpnvtkedsa fqkdleelev llge
//
LOCUS       XP_061013534             474 aa            linear   MAM 02-DEC-2023
DEFINITION  regulator of microtubule dynamics protein 3 isoform X1 [Dama dama].
ACCESSION   XP_061013534
VERSION     XP_061013534.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157551.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..474
                     /product="regulator of microtubule dynamics protein 3
                     isoform X1"
                     /calculated_mol_wt=52150
     Region          229..>451
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          366..416
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          421..450
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..474
                     /gene="RMDN3"
                     /coded_by="XM_061157551.1:180..1604"
                     /db_xref="GeneID:133066449"
ORIGIN      
        1 msslgtlgga raglglllgt aaglgflcal ysqrwkrtqr rgqsqsrsns ldytqtsepg
       61 rqvrplravp geagdaavlp slprgqeevl drlefvltsl valrreveel rsslqglagq
      121 ivgevrshme enqkvarrrr fpfarersds tgsssvyfta tsgatftdae seggyttana
      181 esdyerdser esdgdgedev scetvkmgrk dsldleveve vvlgpepeal eaggspgqed
      241 vlpllqqade lhqgseqgkr egfqlllnnk laqhgsrqdf lwrlaraysd mcelaeease
      301 krsyalsgke aaevalekgn enaechqwya vlcgqlaehe giqrriqsgf sfkehvdkai
      361 alkpenpmah fllgrwcyqv shlswlekkt atalsesplg atvqdalssf lkaeelqpgf
      421 skagriyick cykelgknpe akqwmklale lpnvtkedsa fqkdleelev llge
//
LOCUS       XP_061013535             474 aa            linear   MAM 02-DEC-2023
DEFINITION  regulator of microtubule dynamics protein 3 isoform X1 [Dama dama].
ACCESSION   XP_061013535
VERSION     XP_061013535.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157552.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..474
                     /product="regulator of microtubule dynamics protein 3
                     isoform X1"
                     /calculated_mol_wt=52150
     Region          229..>451
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          366..416
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          421..450
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..474
                     /gene="RMDN3"
                     /coded_by="XM_061157552.1:97..1521"
                     /db_xref="GeneID:133066449"
ORIGIN      
        1 msslgtlgga raglglllgt aaglgflcal ysqrwkrtqr rgqsqsrsns ldytqtsepg
       61 rqvrplravp geagdaavlp slprgqeevl drlefvltsl valrreveel rsslqglagq
      121 ivgevrshme enqkvarrrr fpfarersds tgsssvyfta tsgatftdae seggyttana
      181 esdyerdser esdgdgedev scetvkmgrk dsldleveve vvlgpepeal eaggspgqed
      241 vlpllqqade lhqgseqgkr egfqlllnnk laqhgsrqdf lwrlaraysd mcelaeease
      301 krsyalsgke aaevalekgn enaechqwya vlcgqlaehe giqrriqsgf sfkehvdkai
      361 alkpenpmah fllgrwcyqv shlswlekkt atalsesplg atvqdalssf lkaeelqpgf
      421 skagriyick cykelgknpe akqwmklale lpnvtkedsa fqkdleelev llge
//
LOCUS       XP_061013536             473 aa            linear   MAM 02-DEC-2023
DEFINITION  regulator of microtubule dynamics protein 3 isoform X2 [Dama dama].
ACCESSION   XP_061013536
VERSION     XP_061013536.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157553.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..473
                     /product="regulator of microtubule dynamics protein 3
                     isoform X2"
                     /calculated_mol_wt=52022
     Region          245..>450
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          365..415
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          420..449
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..473
                     /gene="RMDN3"
                     /coded_by="XM_061157553.1:160..1581"
                     /db_xref="GeneID:133066449"
ORIGIN      
        1 msslgtlgga raglglllgt aaglgflcal ysqrwkrtqr rgqsqsrsns ldytqtsepg
       61 rqvrplravp geagdaavlp slprgqeevl drlefvltsl valrreveel rsslqglagq
      121 ivgevrshme enqkvarrrr fpfarersds tgsssvyfta tsgatftdae seggyttana
      181 esdyerdser esdgdgedev scetvkmgrk dsldleveve vvlgpepeal eaggspgqed
      241 vlpllqqade lhqgseqgkr egfqlllnnk lahgsrqdfl wrlaraysdm celaeeasek
      301 rsyalsgkea aevalekgne naechqwyav lcgqlaeheg iqrriqsgfs fkehvdkaia
      361 lkpenpmahf llgrwcyqvs hlswlekkta talsesplga tvqdalssfl kaeelqpgfs
      421 kagriyickc ykelgknpea kqwmklalel pnvtkedsaf qkdleelevl lge
//
LOCUS       XP_061013537             441 aa            linear   MAM 02-DEC-2023
DEFINITION  regulator of microtubule dynamics protein 3 isoform X3 [Dama dama].
ACCESSION   XP_061013537
VERSION     XP_061013537.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157554.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..441
                     /product="regulator of microtubule dynamics protein 3
                     isoform X3"
                     /calculated_mol_wt=48652
     Region          229..>418
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     CDS             1..441
                     /gene="RMDN3"
                     /coded_by="XM_061157554.1:160..1485"
                     /db_xref="GeneID:133066449"
ORIGIN      
        1 msslgtlgga raglglllgt aaglgflcal ysqrwkrtqr rgqsqsrsns ldytqtsepg
       61 rqvrplravp geagdaavlp slprgqeevl drlefvltsl valrreveel rsslqglagq
      121 ivgevrshme enqkvarrrr fpfarersds tgsssvyfta tsgatftdae seggyttana
      181 esdyerdser esdgdgedev scetvkmgrk dsldleveve vvlgpepeal eaggspgqed
      241 vlpllqqade lhqgseqgkr egfqlllnnk laqhgsrqdf lwrlaraysd mcelaeease
      301 krsyalsgke aaevalekgn enaechqwya vlcgqlaehe giqrriqsgf sfkehvdkai
      361 alkpenpmah fllgrwcyqa eelqpgfska griyickcyk elgknpeakq wmklalelpn
      421 vtkedsafqk dleelevllg e
//
LOCUS       XP_061013539             399 aa            linear   MAM 02-DEC-2023
DEFINITION  abscission/NoCut checkpoint regulator [Dama dama].
ACCESSION   XP_061013539
VERSION     XP_061013539.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157556.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..399
                     /product="abscission/NoCut checkpoint regulator"
                     /calculated_mol_wt=44010
     Region          4..54
                     /region_name="FYVE_ZFY19"
                     /note="FYVE-related domain found in FYVE domain-containing
                     protein 19 (ZFY19) and similar proteins; cd15749"
                     /db_xref="CDD:277288"
     Region          346..390
                     /region_name="Bbox1_ANCHR-like"
                     /note="B-box-type 1 zinc finger found in Abscission/NoCut
                     checkpoint regulator (ANCHR) and similar proteins;
                     cd19817"
                     /db_xref="CDD:380875"
     CDS             1..399
                     /gene="ZFYVE19"
                     /coded_by="XM_061157556.1:106..1305"
                     /db_xref="GeneID:133066450"
ORIGIN      
        1 mesrcygcav kftlfkkeyg ckncgrafcs gclsfsaavp ragntqqkvc kqchevltrg
       61 sspanaskws ppqnykkrva aleakqkpst pqsrgltqqd qviterlarl rqenkpksvp
      121 sqaeiearla alrdapqgpv pstqemearl avlqgrvpss qgpqlahqpp dprtqvqqae
      181 dlltqltaev aideswereg patsiqndln rggpgaqsts srgqatwsle eeksrllaea
      241 avelrqentr qerilalakr lavlqgrdpd kvtlqdyhlp dsddeeeeet aiqrvlqqlt
      301 eeaaldeasg fnipveptpq pqdqscraep kaqtlaaqpe eeedelpwcc icnedatlrc
      361 agcdgdlycv rcfreghdaf eltehqtsay qplhkgrgh
//
LOCUS       XP_061013540             399 aa            linear   MAM 02-DEC-2023
DEFINITION  abscission/NoCut checkpoint regulator [Dama dama].
ACCESSION   XP_061013540
VERSION     XP_061013540.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157557.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..399
                     /product="abscission/NoCut checkpoint regulator"
                     /calculated_mol_wt=44010
     Region          4..54
                     /region_name="FYVE_ZFY19"
                     /note="FYVE-related domain found in FYVE domain-containing
                     protein 19 (ZFY19) and similar proteins; cd15749"
                     /db_xref="CDD:277288"
     Region          346..390
                     /region_name="Bbox1_ANCHR-like"
                     /note="B-box-type 1 zinc finger found in Abscission/NoCut
                     checkpoint regulator (ANCHR) and similar proteins;
                     cd19817"
                     /db_xref="CDD:380875"
     CDS             1..399
                     /gene="ZFYVE19"
                     /coded_by="XM_061157557.1:106..1305"
                     /db_xref="GeneID:133066450"
ORIGIN      
        1 mesrcygcav kftlfkkeyg ckncgrafcs gclsfsaavp ragntqqkvc kqchevltrg
       61 sspanaskws ppqnykkrva aleakqkpst pqsrgltqqd qviterlarl rqenkpksvp
      121 sqaeiearla alrdapqgpv pstqemearl avlqgrvpss qgpqlahqpp dprtqvqqae
      181 dlltqltaev aideswereg patsiqndln rggpgaqsts srgqatwsle eeksrllaea
      241 avelrqentr qerilalakr lavlqgrdpd kvtlqdyhlp dsddeeeeet aiqrvlqqlt
      301 eeaaldeasg fnipveptpq pqdqscraep kaqtlaaqpe eeedelpwcc icnedatlrc
      361 agcdgdlycv rcfreghdaf eltehqtsay qplhkgrgh
//
LOCUS       XP_061013541             339 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA repair protein RAD51 homolog 1 [Dama dama].
ACCESSION   XP_061013541
VERSION     XP_061013541.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157558.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..339
                     /product="DNA repair protein RAD51 homolog 1"
                     /calculated_mol_wt=36868
     Region          25..339
                     /region_name="recomb_RAD51"
                     /note="DNA repair protein RAD51; TIGR02239"
                     /db_xref="CDD:274048"
     CDS             1..339
                     /gene="RAD51"
                     /coded_by="XM_061157558.1:353..1372"
                     /db_xref="GeneID:133066451"
ORIGIN      
        1 mamemqlesn adtsveeesf gpqpisrleq cginandvkk leeagfhtve avayapkkel
       61 inikgiseak adkilteaak lvpmgfttat efhqrrseii qittgskeld kllqggietg
      121 sitemfgefr tgktqichtl avtcqlpidr gggegkamyi dtegtfrper llavaerygl
      181 sgsdvldnva yargfntdhq tqllyqasam mvesryalli vdsatalyrt dysgrgelsa
      241 rqmhlarflr mllrladefg vavvitnqvv aqvdgaamfa adpkkpiggn iiahasttrl
      301 ylrkgrgetr ickiydspcl peaeamfain adgvgdakd
//
LOCUS       XP_061013542             304 aa            linear   MAM 02-DEC-2023
DEFINITION  dnaJ homolog subfamily C member 17 [Dama dama].
ACCESSION   XP_061013542
VERSION     XP_061013542.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157559.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..304
                     /product="dnaJ homolog subfamily C member 17"
                     /calculated_mol_wt=34534
     Region          11..73
                     /region_name="DnaJ"
                     /note="DnaJ domain; pfam00226"
                     /db_xref="CDD:395170"
     Site            order(39..41,50,53..54,57..58)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     Region          <75..>159
                     /region_name="PRK00409"
                     /note="recombination and DNA strand exchange inhibitor
                     protein; Reviewed"
                     /db_xref="CDD:234750"
     Region          183..247
                     /region_name="RRM_DNAJC17"
                     /note="RNA recognition motif (RRM) found in the DnaJ
                     homolog subfamily C member 17; cd12429"
                     /db_xref="CDD:409863"
     CDS             1..304
                     /gene="DNAJC17"
                     /coded_by="XM_061157559.1:77..991"
                     /db_xref="GeneID:133066452"
ORIGIN      
        1 mavtkellqm dlyallgiee kaedkevkka yrqkalschp dknpdnpraa elfhqlsqal
       61 evltdaaara aydkvrkakk qaaertqkld errkkvkldl earerqaqtl gseeeeesgs
      121 aktleqeier lreegsrqle eqqrlireqi rqeqeqrlrg maenpenket pklklkwksk
      181 keaesqggys rdvllrlfqk ygevlnlvls skkagtavve fatvkaaela vqnevglvdn
      241 plkiswlegr pqstighhhp glsqgsvvse rdyeslvmmr mrqaaerqql iaqmqqedqa
      301 gqpt
//
LOCUS       XP_061013543             166 aa            linear   MAM 02-DEC-2023
DEFINITION  protein phosphatase 1 regulatory subunit 14D isoform X1 [Dama
            dama].
ACCESSION   XP_061013543
VERSION     XP_061013543.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157560.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..166
                     /product="protein phosphatase 1 regulatory subunit 14D
                     isoform X1"
                     /calculated_mol_wt=19089
     CDS             1..166
                     /gene="PPP1R14D"
                     /coded_by="XM_061157560.1:245..745"
                     /db_xref="GeneID:133066453"
ORIGIN      
        1 mlsssptsct spnpdkenps kkvqwasgrr rrtsstdses ksqsdpfrpr srkpsrltvk
       61 mssgwnctvy rlfrinqllq slrstwrlsw nypqrsrrls wsllslscsv nsrnfrdsvd
      121 lrnkpyetsf islstaqsal npwilgwvgn sslgprrgtw rmrrdi
//
LOCUS       XP_061013544             163 aa            linear   MAM 02-DEC-2023
DEFINITION  protein phosphatase 1 regulatory subunit 14D isoform X2 [Dama
            dama].
ACCESSION   XP_061013544
VERSION     XP_061013544.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157561.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..163
                     /product="protein phosphatase 1 regulatory subunit 14D
                     isoform X2"
                     /calculated_mol_wt=18584
     CDS             1..163
                     /gene="PPP1R14D"
                     /coded_by="XM_061157561.1:231..722"
                     /db_xref="GeneID:133066453"
ORIGIN      
        1 mlsssptsct spnpdkenps kkvqwasgrr rrtsstdses ksqsdpfrpr srkpsrltvk
       61 inqllqslrs twrlswnypq rsrrlswrlf sktapapqsl lslscsvnsr nfrdsvdlrn
      121 kpyetsfisl staqsalnpw ilgwvgnssl gprrgtwrmr rdi
//
LOCUS       XP_061013545             152 aa            linear   MAM 02-DEC-2023
DEFINITION  protein phosphatase 1 regulatory subunit 14D isoform X3 [Dama
            dama].
ACCESSION   XP_061013545
VERSION     XP_061013545.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157562.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..152
                     /product="protein phosphatase 1 regulatory subunit 14D
                     isoform X3"
                     /calculated_mol_wt=17387
     CDS             1..152
                     /gene="PPP1R14D"
                     /coded_by="XM_061157562.1:239..697"
                     /db_xref="GeneID:133066453"
ORIGIN      
        1 mlsssptsct spnpdkenps kkvqwasgrr rrtsstdses ksqsdpfrpr srkpsrltvk
       61 inqllqslrs twrlswnypq rsrrlswsll slscsvnsrn frdsvdlrnk pyetsfisls
      121 taqsalnpwi lgwvgnsslg prrgtwrmrr di
//
LOCUS       XP_061013546             145 aa            linear   MAM 02-DEC-2023
DEFINITION  protein phosphatase 1 regulatory subunit 14D isoform X4 [Dama
            dama].
ACCESSION   XP_061013546
VERSION     XP_061013546.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157563.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..145
                     /product="protein phosphatase 1 regulatory subunit 14D
                     isoform X4"
                     /calculated_mol_wt=16699
     Region          52..145
                     /region_name="PP1_inhibitor"
                     /note="PKC-activated protein phosphatase-1 inhibitor;
                     pfam05361"
                     /db_xref="CDD:461630"
     CDS             1..145
                     /gene="PPP1R14D"
                     /coded_by="XM_061157563.1:230..667"
                     /db_xref="GeneID:133066453"
ORIGIN      
        1 mlsssptsct spnpdkenps kkvqwasgrr rrtsstdses ksqsdpfrpr srkpsrltvk
       61 ydrgqlqrwv emeqwvdtqv qelfqdqpts sepeidleal melpteeqkt qleailqncp
      121 rptepfisel lsqlkklqrl srpqk
//
LOCUS       XP_061013548             134 aa            linear   MAM 02-DEC-2023
DEFINITION  protein phosphatase 1 regulatory subunit 14D isoform X5 [Dama
            dama].
ACCESSION   XP_061013548
VERSION     XP_061013548.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157565.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..134
                     /product="protein phosphatase 1 regulatory subunit 14D
                     isoform X5"
                     /calculated_mol_wt=15475
     Region          52..134
                     /region_name="PP1_inhibitor"
                     /note="PKC-activated protein phosphatase-1 inhibitor;
                     pfam05361"
                     /db_xref="CDD:461630"
     CDS             1..134
                     /gene="PPP1R14D"
                     /coded_by="XM_061157565.1:237..641"
                     /db_xref="GeneID:133066453"
ORIGIN      
        1 mlsssptsct spnpdkenps kkvqwasgrr rrtsstdses ksqsdpfrpr srkpsrltvk
       61 ydrgqlqrwv emeqwvdtqv qelfqdqpts sepeidleal melpteeqkt qlepfisell
      121 sqlkklqrls rpqk
//
LOCUS       XP_061013549             118 aa            linear   MAM 02-DEC-2023
DEFINITION  protein phosphatase 1 regulatory subunit 14D isoform X6 [Dama
            dama].
ACCESSION   XP_061013549
VERSION     XP_061013549.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157566.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..118
                     /product="protein phosphatase 1 regulatory subunit 14D
                     isoform X6"
                     /calculated_mol_wt=13277
     Region          <67..118
                     /region_name="PP1_inhibitor"
                     /note="PKC-activated protein phosphatase-1 inhibitor;
                     pfam05361"
                     /db_xref="CDD:461630"
     CDS             1..118
                     /gene="PPP1R14D"
                     /coded_by="XM_061157566.1:236..592"
                     /db_xref="GeneID:133066453"
ORIGIN      
        1 mlsssptsct spnpdkenps kkvqwasgrr rrtsstdses ksqsdpfrpr srkpsrltdq
       61 ptssepeidl ealmelptee qktqleailq ncprptepfi sellsqlkkl qrlsrpqk
//
LOCUS       XP_061013550             177 aa            linear   MAM 02-DEC-2023
DEFINITION  protein phosphatase 1 regulatory subunit 14D isoform X7 [Dama
            dama].
ACCESSION   XP_061013550
VERSION     XP_061013550.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157567.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..177
                     /product="protein phosphatase 1 regulatory subunit 14D
                     isoform X7"
                     /calculated_mol_wt=20286
     CDS             1..177
                     /gene="PPP1R14D"
                     /coded_by="XM_061157567.1:508..1041"
                     /db_xref="GeneID:133066453"
ORIGIN      
        1 mlsssptsct spnpdkenps kkvqwasgrr rrtsstdses ksqsdpfrpr srkpsrltvk
       61 mssgwnctvy rlfrinqllq slrstwrlsw nypqrsrrls wrlfsktapa pqsllslscs
      121 vnsrnfrdsv dlrnkpyets fislstaqsa lnpwilgwvg nsslgprrgt wrmrrdi
//
LOCUS       XP_061013551             176 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C15orf62 homolog, mitochondrial [Dama
            dama].
ACCESSION   XP_061013551
VERSION     XP_061013551.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157568.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..176
                     /product="uncharacterized protein C15orf62 homolog,
                     mitochondrial"
                     /calculated_mol_wt=19782
     CDS             1..176
                     /gene="C12H15orf62"
                     /coded_by="XM_061157568.1:2249..2779"
                     /db_xref="GeneID:133066454"
ORIGIN      
        1 metwrkgsfr spsffkrlsl grprtlrrqg svlsqastag gdheeysnre virelrgrpd
       61 grrlplwgde qpratllapp kpprlyresf scpnileaps aeytaaysat lpsalsvadt
      121 lhrsseedlt dmppfqrtpa pdlsdpffsf kvdlgislle evlqmlreqf pselsf
//
LOCUS       XP_061013552              84 aa            linear   MAM 02-DEC-2023
DEFINITION  GTP cyclohydrolase 1 feedback regulatory protein [Dama dama].
ACCESSION   XP_061013552
VERSION     XP_061013552.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157569.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..84
                     /product="GTP cyclohydrolase 1 feedback regulatory
                     protein"
                     /calculated_mol_wt=9458
     Region          2..84
                     /region_name="GFRP"
                     /note="GTP cyclohydrolase I feedback regulatory protein
                     (GFRP); pfam06399"
                     /db_xref="CDD:461897"
     CDS             1..84
                     /gene="GCHFR"
                     /coded_by="XM_061157569.1:99..353"
                     /db_xref="GeneID:133066455"
ORIGIN      
        1 mpyllistqi rmevgptmvg dehsdpelmq hlgaskrsvl gnnfseyyvn dpprivldkl
       61 errgfrvlsm tgvgqtlvwc lhke
//
LOCUS       XP_061013553             195 aa            linear   MAM 02-DEC-2023
DEFINITION  COMM domain-containing protein 3-like [Dama dama].
ACCESSION   XP_061013553
VERSION     XP_061013553.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157570.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..195
                     /product="COMM domain-containing protein 3-like"
                     /calculated_mol_wt=22173
     Region          98..194
                     /region_name="Commd3"
                     /note="COMM_Domain containing protein 3. The COMM Domain
                     is found at the C-terminus of a variety of proteins;
                     presumably all COMM_Domain containing proteins are located
                     in the nucleus and the COMM domain plays a role in
                     protein-protein interactions. Several...; cd04751"
                     /db_xref="CDD:240099"
     CDS             1..195
                     /gene="LOC133066456"
                     /coded_by="XM_061157570.1:411..998"
                     /db_xref="GeneID:133066456"
ORIGIN      
        1 melseyvqkg fqmladpgsf dsntftlllr aafqsllddq adeamldhpd lkhidpvvlk
       61 hchaaavtyi leagkqradk stlstyledc kfdserielf wteyqnnrns leillgsigr
      121 slphitdasw rleyqiktnq ldkmyrpayl vtlnventds rshpeisfsc smeqlqdlvg
      181 klkdalksle ratql
//
LOCUS       XP_061013554            2351 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: kinetochore scaffold 1 [Dama dama].
ACCESSION   XP_061013554
VERSION     XP_061013554.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157571.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2351
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2351
                     /product="LOW QUALITY PROTEIN: kinetochore scaffold 1"
                     /calculated_mol_wt=264670
     Region          20..77
                     /region_name="KNL1_NTD"
                     /note="N-terminal domain found in kinetochore scaffold 1
                     (KNL1) and similar proteins; cd21853"
                     /db_xref="CDD:439316"
     Site            order(24..28,59..72)
                     /site_type="other"
                     /note="PP1 binding site [polypeptide binding]"
                     /db_xref="CDD:439316"
     Region          141..163
                     /region_name="MELT"
                     /note="MELT motif; pfam19221"
                     /db_xref="CDD:466004"
     Region          477..498
                     /region_name="MELT"
                     /note="MELT motif; pfam19221"
                     /db_xref="CDD:466004"
     Region          754..776
                     /region_name="MELT"
                     /note="MELT motif; pfam19221"
                     /db_xref="CDD:466004"
     Region          865..888
                     /region_name="MELT"
                     /note="MELT motif; pfam19221"
                     /db_xref="CDD:466004"
     Region          907..930
                     /region_name="MELT"
                     /note="MELT motif; pfam19221"
                     /db_xref="CDD:466004"
     Region          944..968
                     /region_name="MELT"
                     /note="MELT motif; pfam19221"
                     /db_xref="CDD:466004"
     Region          1169..1191
                     /region_name="MELT"
                     /note="MELT motif; pfam19221"
                     /db_xref="CDD:466004"
     Region          <1719..>2154
                     /region_name="CCDC158"
                     /note="Coiled-coil domain-containing protein 158;
                     pfam15921"
                     /db_xref="CDD:464943"
     Region          2029..>2135
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          2128..2239
                     /region_name="DRWD-N_Knl1"
                     /note="N-terminal double-RWD domain of kinetochore
                     scaffold 1 and related proteins; cd22817"
                     /db_xref="CDD:467642"
     Site            order(2158..2161,2191,2193..2195,2203,2206)
                     /site_type="other"
                     /note="Nsl1 interface [polypeptide binding]"
                     /db_xref="CDD:467642"
     Region          2246..2344
                     /region_name="DRWD-C_Knl1"
                     /note="C-terminal double-RWD domain of kinetochore
                     scaffold 1 and related proteins; cd22892"
                     /db_xref="CDD:467644"
     Site            order(2249,2252)
                     /site_type="other"
                     /note="Nsl1 interface [polypeptide binding]"
                     /db_xref="CDD:467644"
     CDS             1..2351
                     /gene="KNL1"
                     /coded_by="XM_061157571.1:483..7538"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /db_xref="GeneID:133066457"
ORIGIN      
        1 mdgmsseane engnverpvg rrhssilkpp rsplqdlrgg ngnetiqesn alrnkknsrr
       61 vsfadtikif qteshmkivk kseiseteag enilfiqkkn pednyceitg mntllcapiq
      121 tqmpqreisi teysherkha ndqtvifsde nqmdltasht vmiskghldc tksekstkid
      181 ttsflanlkl htedsrmkke lhfsvdqnts sekkinfndf ikrlkigksn aspftgpdke
      241 nsempihske ankttsvhqm rvslgvdent snmtrllreq ddgmnftqch ttniqtfvpt
      301 sneaslrefk gdditvygnd fmdltishtv qklpsannls eienqtqdvm mdvstcyetk
      361 aleqktvfkd kpndafqdls lnpegnihmi rshitgteiq tvtqatnqdi rplalipesk
      421 csgptiqddk tffysscnda meltkchssm reekslvkhd snyskmypnp dgnsllrekt
      481 vysgedsmdi tkshtvkidn qifkqvqtnv qkatapvsek emmiqnhiiv senwdinvnc
      541 rsvpllsker lqqspenplf isltdkrtei fidenmdltk shtvnlgsqf plascnltse
      601 ntskshchsk slsnewekmt kdhidlsqqq niisknipan twdkeksqvl kispyldkds
      661 pqspdinqdi atkhnivyfc edlhkqvplg nnrntisceq alfpttkplf ssrgqpairn
      721 hnvvnsqtvk svlgqnsklp eplrkslgnp ipdcsdktvi cseeeenmdl tkshtvitgf
      781 gpsevlelsk tnlentnsql stvnrqkalk vekcngspie kmgvfisngi mdvledknvq
      841 ksgilnekqd vkicgrkslg rlkvdktvvf segnendmdi tksctveish rplldehdsh
      901 lvplagnsnt vlyacgqddm evtrshttai ecktvspdkt ttrpvdktvm fvddhdelem
      961 tkshtvfidc qakeravlpd rpnfelskrk slekskvtpt steesvfspq nverdhsvak
     1021 vsqltlpgkw snhgplekae afiaddnmev skstiwkndr nvqkpvflne plscknqrrk
     1081 slrrkndtti afskndkndm dviqcctvei nnksvledke dshfvplegp sntvlytcgq
     1141 ddmeitrsht taleykplsp dkittrtidk tvmfvdnhsd levtkshtvf idcqatekil
     1201 qecsafgiak ektlgvsfpq dgnsiqevtk kqalavenki ilhseqkhnv ipfvptnals
     1261 gsqgetdvkf hstsvdeevm kvvgqaytfe kakiescqln stdrrnvdft srpatavcgs
     1321 gdnysclpnv tsffgnlekn vmslcdkded lkashcpvqn dlpyanssas dddlkseglp
     1381 lsapclleke kvvqtntqgq lhcvpkmlkd qdlikkppnl isnetlvyge dlgkmtklnl
     1441 kpvsfklprd qaepsvdkae hnlkktfvdd vcvasqhhll tqlpplpqqg qnivnkdeai
     1501 lskagnnlni vggnsseptc endstmlyng kqftaackke pkkniqtaec ntatdfhsns
     1561 altkqviqtl inpreasdpv iassvatcsv kpnlnnlngk tedfldfqpv clppspeqll
     1621 klvnkahsdm svvqaieihn vnivssnvkd drdeenkvph ngaettsvpl mttvkdkmrr
     1681 cslgiflprl pnkrncsvtg iddlkqvpad ttdlnhletq pvsskdsgig ivttklnlsp
     1741 sqyineenlp icpgeinssd sisidteeka ltetyqkets psenkmeetc nsqkrtwvqe
     1801 gdddiqnekk irkneigfsd taqyqeisdl haegdmdkna nsvlikslsr tpsscsssld
     1861 sikadgtsld lsthlgsqie sqflrdtvce eslkeklkdg ritikeffil lqvhiliqkp
     1921 rqsnlpakft intsptledl mlsqyvyrpk iqiykedcea lrqkieelkl stlnqdkllt
     1981 dinrnlwekm khcsdeelka fgiylnkiks rftkmtkvft hqgkvalysk lvqsaqsere
     2041 klhkrinemd dilkkidncl teveietknl edeqkdspve elnsevraae keleqlktee
     2101 eklqrdflel eiqkeqilaq ldfvqkqtkr teelldqlsl sewdviewsd nqavftflyd
     2161 tieliitfge pvvglpfldk ayrkivdlnf qslldedkap pssllvhnli fqyieqqesw
     2221 kktcttqhqv pkmlqeislv vshckllgee ieflkrwgpn ynlisinvkn telkllfsss
     2281 aafakfeitl slsahypsvp lpfsiqnhlg nigqdevtai lskvpledny lknvvkqiyr
     2341 dllqddcpfy h
//
LOCUS       XP_061013555             552 aa            linear   MAM 02-DEC-2023
DEFINITION  pseudouridylate synthase RPUSD2 [Dama dama].
ACCESSION   XP_061013555
VERSION     XP_061013555.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157572.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..552
                     /product="pseudouridylate synthase RPUSD2"
                     /calculated_mol_wt=60712
     Region          <42..>139
                     /region_name="PRK14959"
                     /note="DNA polymerase III subunits gamma and tau;
                     Provisional"
                     /db_xref="CDD:184923"
     Region          215..398
                     /region_name="PseudoU_synth_ScRIB2"
                     /note="Pseudouridine synthases similar to Saccharomyces
                     cerevisiae RIB2; cd02557"
                     /db_xref="CDD:211331"
     Site            order(278..281,380)
                     /site_type="active"
                     /note="probable active site [active]"
                     /db_xref="CDD:211331"
     CDS             1..552
                     /gene="RPUSD2"
                     /coded_by="XM_061157572.1:14..1672"
                     /db_xref="GeneID:133066458"
ORIGIN      
        1 mwlggrswll vfgqvcsslr cltfastwga crgpmaerll tgaeaasglg apaqqngdag
       61 gdargeqppg hsepagseve pvsgdakqps gngerapaas pgpgkrkkrr gavgervvpp
      121 pkkrragvsf gdehfaetsy yfegglrkvr pyyfdfrtyc kgrwvghsll hvfgtefraq
      181 playyeaavr agrlhlneep vqdlsivlkd ndflrntvhr heppvtaepi rllaenedvv
      241 vvdkpssipv hpcgrfrhnt vifilgkehq lkelhplhrl drltsgvlmf aktaavseri
      301 heqvrdrqle keyvcrvage fpaeevtcke pilvvsykvg vcrvdpqgka cesvfqrlsy
      361 nghssvvrcr pltgrthqir vhlqflghpi lndpiynsaa wgpsrgrggh ipktdeellr
      421 dlvaehqakq sldvldlcgg dlcpgppdsi apsselnkdc leemaasaqk mdgaveaapq
      481 dldgvpvasg katktdvvnq etdplcsecr rvpqdpspqd lvmflhalry kgpdfeyhsp
      541 mpawarddwq eh
//
LOCUS       XP_061013556             179 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 32 [Dama dama].
ACCESSION   XP_061013556
VERSION     XP_061013556.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157573.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..179
                     /product="coiled-coil domain-containing protein 32"
                     /calculated_mol_wt=20046
     Region          17..166
                     /region_name="CCDC32"
                     /note="Coiled-coil domain containing 32; pfam14989"
                     /db_xref="CDD:464424"
     CDS             1..179
                     /gene="CCDC32"
                     /coded_by="XM_061157573.1:250..789"
                     /db_xref="GeneID:133066460"
ORIGIN      
        1 mkmfesidst ttrsgpdlwa eicsclphpd qedsasnafs dsfmdsypag tgqreaphfa
       61 pqpavkpwap lqdsevylas lekklrrikg lnqevtskdm lrtlaqakke cwdrflqekl
      121 aseffvdgld sdestlehfk rwlqpdkvai steeiqylip pesqvekpap gdeptaaeq
//
LOCUS       XP_061013557             179 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 32 [Dama dama].
ACCESSION   XP_061013557
VERSION     XP_061013557.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157574.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..179
                     /product="coiled-coil domain-containing protein 32"
                     /calculated_mol_wt=20046
     Region          17..166
                     /region_name="CCDC32"
                     /note="Coiled-coil domain containing 32; pfam14989"
                     /db_xref="CDD:464424"
     CDS             1..179
                     /gene="CCDC32"
                     /coded_by="XM_061157574.1:245..784"
                     /db_xref="GeneID:133066460"
ORIGIN      
        1 mkmfesidst ttrsgpdlwa eicsclphpd qedsasnafs dsfmdsypag tgqreaphfa
       61 pqpavkpwap lqdsevylas lekklrrikg lnqevtskdm lrtlaqakke cwdrflqekl
      121 aseffvdgld sdestlehfk rwlqpdkvai steeiqylip pesqvekpap gdeptaaeq
//
LOCUS       XP_061013558             179 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 32 [Dama dama].
ACCESSION   XP_061013558
VERSION     XP_061013558.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157575.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..179
                     /product="coiled-coil domain-containing protein 32"
                     /calculated_mol_wt=20046
     Region          17..166
                     /region_name="CCDC32"
                     /note="Coiled-coil domain containing 32; pfam14989"
                     /db_xref="CDD:464424"
     CDS             1..179
                     /gene="CCDC32"
                     /coded_by="XM_061157575.1:88..627"
                     /db_xref="GeneID:133066460"
ORIGIN      
        1 mkmfesidst ttrsgpdlwa eicsclphpd qedsasnafs dsfmdsypag tgqreaphfa
       61 pqpavkpwap lqdsevylas lekklrrikg lnqevtskdm lrtlaqakke cwdrflqekl
      121 aseffvdgld sdestlehfk rwlqpdkvai steeiqylip pesqvekpap gdeptaaeq
//
LOCUS       XP_061013559             179 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 32 [Dama dama].
ACCESSION   XP_061013559
VERSION     XP_061013559.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157576.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..179
                     /product="coiled-coil domain-containing protein 32"
                     /calculated_mol_wt=20046
     Region          17..166
                     /region_name="CCDC32"
                     /note="Coiled-coil domain containing 32; pfam14989"
                     /db_xref="CDD:464424"
     CDS             1..179
                     /gene="CCDC32"
                     /coded_by="XM_061157576.1:30..569"
                     /db_xref="GeneID:133066460"
ORIGIN      
        1 mkmfesidst ttrsgpdlwa eicsclphpd qedsasnafs dsfmdsypag tgqreaphfa
       61 pqpavkpwap lqdsevylas lekklrrikg lnqevtskdm lrtlaqakke cwdrflqekl
      121 aseffvdgld sdestlehfk rwlqpdkvai steeiqylip pesqvekpap gdeptaaeq
//
LOCUS       XP_061013561             376 aa            linear   MAM 02-DEC-2023
DEFINITION  carbohydrate sulfotransferase 14 [Dama dama].
ACCESSION   XP_061013561
VERSION     XP_061013561.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157578.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..376
                     /product="carbohydrate sulfotransferase 14"
                     /calculated_mol_wt=42931
     Region          144..365
                     /region_name="Sulfotransfer_2"
                     /note="Sulfotransferase family; pfam03567"
                     /db_xref="CDD:427369"
     CDS             1..376
                     /gene="CHST14"
                     /coded_by="XM_061157578.1:216..1346"
                     /db_xref="GeneID:133066461"
ORIGIN      
        1 mfprpltpla apngaeplgr alrraplgra raglggppll lpsmlmfavi vassglllmi
       61 ergilaemkp lplhppnred avgrgtvprp grlsldagds dlqvrqdvrn rtlravcgqp
      121 gmprdpwdlp vgqrrtllrh ilvsdryrfl ycyvpkvacs nwkrvlkvla gvldnvdvrl
      181 kmdhrsdlvf ladlrpdeir yrlqhyfkfl fvrdplerll sayrnkfgei peyqqrygve
      241 ivrryragag pspagddvtf peflrylade dpermnehwm pvyhlcqpca vrydfvgsye
      301 rleadanqvl ewvrapphvr fparqawyrp aspeslhyhl csaprallqd vlpkyildfs
      361 lfayplpnvt reachq
//
LOCUS       XP_061013562             777 aa            linear   MAM 02-DEC-2023
DEFINITION  bromo adjacent homology domain-containing 1 protein isoform X1
            [Dama dama].
ACCESSION   XP_061013562
VERSION     XP_061013562.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157579.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..777
                     /product="bromo adjacent homology domain-containing 1
                     protein isoform X1"
                     /calculated_mol_wt=84347
     Region          <222..568
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          620..730
                     /region_name="BAH_BAHCC1"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in mammalian BAHCC1 and similar proteins. BAHCC1 stands
                     for BAH domain and coiled-coil containing 1. BAH domains
                     are found in a variety of proteins playing roles in
                     transcriptional silencing and the...; cd04714"
                     /db_xref="CDD:240065"
     CDS             1..777
                     /gene="BAHD1"
                     /coded_by="XM_061157579.1:156..2489"
                     /db_xref="GeneID:133066462"
ORIGIN      
        1 mthtrrkslp mlssgptgrq eplqmegsnv eqraegvepg ppespehltg rrknyplrkr
       61 plvpgkprtc kvlltrlesv agprsadead elppdlpkpp spapssedtg lsqprkrrla
      121 slnaealnnl llereetgsl vgtrrsrggd phrsrdrdra aggwasskkr prlgnlgegs
      181 rdlspelapd egarrdgdpt pkrlaslnaa aflklsqere lplrpprahp eadghsvepp
      241 apkglrpkwa kvngknypka rqgagsgeaa gpgwqgcpee pwpstpprgp vslppyqpls
      301 kalesplglr phlpllmggq aalkpepgrp geespapkqe lhqpsfptpq lsplpmpgnp
      361 adynglygrp eltalgnfyl ycsqdglqcg gysscpmlpe gklspvaapn eglllapssv
      421 sagtpfqhpp wgsrycsded tgangysice mlstslthig tacggcpykm pfaaegcrsl
      481 gqlefplpaa ghpaspahpl lgcpvpsvpp aaepvphlqt ptsepqtvar acpqsakpps
      541 gsksglrtgs scrhtarska arrpshpkqp rvqrprprrr rrrrtngwvp vgaacekavy
      601 vldepepair ksyqaverhg etirvrdtvl lksgprktst pyvakisalw enpesgelmm
      661 sllwyyrpeh lqggrspsmh eplqnevfas rhqdqnsvac ieekcyvltf aeycrfcama
      721 krrgeglpsr ktalvppsad ystpphrtvp edtdpelvfl crhvydfrhg rilknpq
//
LOCUS       XP_061013563             776 aa            linear   MAM 02-DEC-2023
DEFINITION  bromo adjacent homology domain-containing 1 protein isoform X2
            [Dama dama].
ACCESSION   XP_061013563
VERSION     XP_061013563.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157580.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..776
                     /product="bromo adjacent homology domain-containing 1
                     protein isoform X2"
                     /calculated_mol_wt=84218
     Region          <222..567
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          619..729
                     /region_name="BAH_BAHCC1"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in mammalian BAHCC1 and similar proteins. BAHCC1 stands
                     for BAH domain and coiled-coil containing 1. BAH domains
                     are found in a variety of proteins playing roles in
                     transcriptional silencing and the...; cd04714"
                     /db_xref="CDD:240065"
     CDS             1..776
                     /gene="BAHD1"
                     /coded_by="XM_061157580.1:156..2486"
                     /db_xref="GeneID:133066462"
ORIGIN      
        1 mthtrrkslp mlssgptgrq eplqmegsnv eqraegvepg ppespehltg rrknyplrkr
       61 plvpgkprtc kvlltrlesv agprsadead elppdlpkpp spapssedtg lsqprkrrla
      121 slnaealnnl llereetgsl vgtrrsrggd phrsrdrdra aggwasskkr prlgnlgegs
      181 rdlspelapd egarrdgdpt pkrlaslnaa aflklsqere lplrpprahp eadghsvepp
      241 apkglrpkwa kvngknypka rqgagsgeaa gpgwqgcpee pwpstpprgp vslppyqpls
      301 kalesplglr phlpllmggq aalkpepgrp geespapkqe lhqpsfptpq lsplpmpgnp
      361 adynglygrp eltalgnfyl ycsqdglqcg gysscpmlpe gklspvaapn eglllapssv
      421 sagtpfqhpp wgsrycsded tgangysice mlstslthig tacggcpykm pfaagcrslg
      481 qlefplpaag hpaspahpll gcpvpsvppa aepvphlqtp tsepqtvara cpqsakppsg
      541 sksglrtgss crhtarskaa rrpshpkqpr vqrprprrrr rrrtngwvpv gaacekavyv
      601 ldepepairk syqaverhge tirvrdtvll ksgprktstp yvakisalwe npesgelmms
      661 llwyyrpehl qggrspsmhe plqnevfasr hqdqnsvaci eekcyvltfa eycrfcamak
      721 rrgeglpsrk talvppsady stpphrtvpe dtdpelvflc rhvydfrhgr ilknpq
//
LOCUS       XP_061013564             774 aa            linear   MAM 02-DEC-2023
DEFINITION  bromo adjacent homology domain-containing 1 protein isoform X3
            [Dama dama].
ACCESSION   XP_061013564
VERSION     XP_061013564.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157581.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..774
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..774
                     /product="bromo adjacent homology domain-containing 1
                     protein isoform X3"
                     /calculated_mol_wt=84009
     Region          <222..568
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          620..727
                     /region_name="BAH_BAHCC1"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in mammalian BAHCC1 and similar proteins. BAHCC1 stands
                     for BAH domain and coiled-coil containing 1. BAH domains
                     are found in a variety of proteins playing roles in
                     transcriptional silencing and the...; cd04714"
                     /db_xref="CDD:240065"
     CDS             1..774
                     /gene="BAHD1"
                     /coded_by="XM_061157581.1:156..2480"
                     /db_xref="GeneID:133066462"
ORIGIN      
        1 mthtrrkslp mlssgptgrq eplqmegsnv eqraegvepg ppespehltg rrknyplrkr
       61 plvpgkprtc kvlltrlesv agprsadead elppdlpkpp spapssedtg lsqprkrrla
      121 slnaealnnl llereetgsl vgtrrsrggd phrsrdrdra aggwasskkr prlgnlgegs
      181 rdlspelapd egarrdgdpt pkrlaslnaa aflklsqere lplrpprahp eadghsvepp
      241 apkglrpkwa kvngknypka rqgagsgeaa gpgwqgcpee pwpstpprgp vslppyqpls
      301 kalesplglr phlpllmggq aalkpepgrp geespapkqe lhqpsfptpq lsplpmpgnp
      361 adynglygrp eltalgnfyl ycsqdglqcg gysscpmlpe gklspvaapn eglllapssv
      421 sagtpfqhpp wgsrycsded tgangysice mlstslthig tacggcpykm pfaaegcrsl
      481 gqlefplpaa ghpaspahpl lgcpvpsvpp aaepvphlqt ptsepqtvar acpqsakpps
      541 gsksglrtgs scrhtarska arrpshpkqp rvqrprprrr rrrrtngwvp vgaacekavy
      601 vldepepair ksyqaverhg etirvrdtvl lksgprktst pyvakisalw enpesgelmm
      661 sllwyyrpeh lqggrspsmh enevfasrhq dqnsvaciee kcyvltfaey crfcamakrr
      721 geglpsrkta lvppsadyst pphrtvpedt dpelvflcrh vydfrhgril knpq
//
LOCUS       XP_061013565             426 aa            linear   MAM 02-DEC-2023
DEFINITION  isovaleryl-CoA dehydrogenase, mitochondrial isoform X1 [Dama dama].
ACCESSION   XP_061013565
VERSION     XP_061013565.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157582.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..426
                     /product="isovaleryl-CoA dehydrogenase, mitochondrial
                     isoform X1"
                     /calculated_mol_wt=46399
     Region          44..423
                     /region_name="IVD"
                     /note="Isovaleryl-CoA dehydrogenase; cd01156"
                     /db_xref="CDD:173845"
     Site            order(127,131,135,174,200,223,277,284,287,290,402..403,
                     406..408)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:173845"
     Site            order(165,167..168,173..174,198,200,409,411)
                     /site_type="other"
                     /note="FAD binding site [chemical binding]"
                     /db_xref="CDD:173845"
     Site            286
                     /site_type="active"
                     /note="catalytic base [active]"
                     /db_xref="CDD:173845"
     CDS             1..426
                     /gene="IVD"
                     /coded_by="XM_061157582.1:46..1326"
                     /db_xref="GeneID:133066463"
ORIGIN      
        1 mataawllgr rvaswrtrlp lhslagritq ransllpvdd ainglneeqk qlrqtmakfl
       61 qehlapqaqe idqsnefknl refwkqlgnl gvlgitapvq yggsglgfle hvlvmeeisr
      121 vsgavglsyg ahsnlcinqi vrngnetqke kylpklisge yigalamsep nagsdvvsmk
      181 lkadkkgdhy vlngnkfwit ngpdadvlvv yaktdvtvvp asrgitafvv ekgmpgfsts
      241 kkldklgmrg sntcelvfed ckvpaanvlg hlgkgvyvlm sgldlerlvl aggplgimqa
      301 vldhtipylh mreafgqkig hfqlmqgkma dmytrlmacr qyvynvakac deghctakdc
      361 agvilysaec atqvaldgiq clggngyind fpmgrflrda klyeigagts evrrlvigra
      421 fnadfh
//
LOCUS       XP_061013566             372 aa            linear   MAM 02-DEC-2023
DEFINITION  isovaleryl-CoA dehydrogenase, mitochondrial isoform X2 [Dama dama].
ACCESSION   XP_061013566
VERSION     XP_061013566.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157583.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..372
                     /product="isovaleryl-CoA dehydrogenase, mitochondrial
                     isoform X2"
                     /calculated_mol_wt=40558
     Region          44..358
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     CDS             1..372
                     /gene="IVD"
                     /coded_by="XM_061157583.1:46..1164"
                     /db_xref="GeneID:133066463"
ORIGIN      
        1 mataawllgr rvaswrtrlp lhslagritq ransllpvdd ainglneeqk qlrqtmakfl
       61 qehlapqaqe idqsnefknl refwkqlgnl gvlgitapvq yggsglgfle hvlvmeeisr
      121 vsgavglsyg ahsnlcinqi vrngnetqke kylpklisge yigalamsep nagsdvvsmk
      181 lkadkkgdhy vlngnkfwit ngpdadvlvv yaktdvtvvp asrgitafvv ekgmpgfsts
      241 kkldklgmrg sntcelvfed ckvpaanvlg hlgkgvyvlm sgldlerlvl aggplgimqa
      301 vldhtipylh mreafgqkig hfqlmqgkma dmytrlmacr qyvynvakac deghctakva
      361 matsttfpwa af
//
LOCUS       XP_061013567             313 aa            linear   MAM 02-DEC-2023
DEFINITION  small kinetochore-associated protein [Dama dama].
ACCESSION   XP_061013567
VERSION     XP_061013567.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157584.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..313
                     /product="small kinetochore-associated protein"
                     /calculated_mol_wt=34729
     Region          <171..>312
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
     CDS             1..313
                     /gene="KNSTRN"
                     /coded_by="XM_061157584.1:1..942"
                     /db_xref="GeneID:133066464"
ORIGIN      
        1 maaaegvaqa sgyrttwppt esaphplppg rrkfpfetqa adavcgtavi aehllnqsde
       61 acgqqeqapg pqpcrlvtmt svvktvytlq pscvlssglp adaqtratfk sqlpvkskev
      121 dvsrphsgas endvtkiikp rrengqvkat dtsrrnlrks ykplskqkse eelkdknqll
      181 eavnkqlhqk lietqgelkd ltqkvellek fqdnclaile skgltpgset lasqqdsted
      241 hmdsmlllqt lqdelklfne takkqmeelq alkvklkmke eeraqfleqq tlcssqvndf
      301 ttaleemeql lei
//
LOCUS       XP_061013568             532 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 9B isoform X1 [Dama dama].
ACCESSION   XP_061013568
VERSION     XP_061013568.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157585.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..532
                     /product="coiled-coil domain-containing protein 9B isoform
                     X1"
                     /calculated_mol_wt=56621
     Region          162..342
                     /region_name="DUF4594"
                     /note="Domain of unknown function (DUF4594); pfam15266"
                     /db_xref="CDD:464604"
     CDS             1..532
                     /gene="CCDC9B"
                     /coded_by="XM_061157585.1:203..1801"
                     /db_xref="GeneID:133066467"
ORIGIN      
        1 mhsagppgae spmsrqeekd aeldrrival rkknqallrr yqeiqedrrq aeqggmavtt
       61 pellrphglt vtisqghtyq iptscspgpl laptpeshsw kgkrvvsrnw arsalgpgaa
      121 seiledeqae ahtgtfclge rvdlavtmen kaeakrivse kptrarnqga egspggglgr
      181 spsmptaiss dsarkgvrep rspalvpgpa pcrapgrple vgwdyaqwkq ereqidqarl
      241 arhrdsqgdw rrpwdldkak ptrqgsskpr eegparvgst rgprsqrklq ppplspdgkg
      301 satrggqqgr pvvalatrsk argterltgr arrwemkenr eepesqegsq strktrneke
      361 heqtqsrmep ggptsalgtt ptpasasleg lkeesgdlaa spaspaspgs ppnsdlvpld
      421 lslggasssg pqestcvlss kpgdqespvs rlegheqplg stepqaepea qtcsgppkea
      481 galepredrp gkagtqlglt prsraprggs qrvrgaggvr srtggpgpag rc
//
LOCUS       XP_061013569             506 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 9B isoform X2 [Dama dama].
ACCESSION   XP_061013569
VERSION     XP_061013569.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157586.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..506
                     /product="coiled-coil domain-containing protein 9B isoform
                     X2"
                     /calculated_mol_wt=53847
     Region          136..316
                     /region_name="DUF4594"
                     /note="Domain of unknown function (DUF4594); pfam15266"
                     /db_xref="CDD:464604"
     CDS             1..506
                     /gene="CCDC9B"
                     /coded_by="XM_061157586.1:201..1721"
                     /db_xref="GeneID:133066467"
ORIGIN      
        1 mhsagppgae spmsrqeekd aeldrrival rkknqallrr yqeiqedrrq aeqggmavtt
       61 pellrphglt vtisqgkrvv srnwarsalg pgaaseiled eqaeahtgtf clgervdlav
      121 tmenkaeakr ivsekptrar nqgaegspgg glgrspsmpt aissdsarkg vreprspalv
      181 pgpapcrapg rplevgwdya qwkqereqid qarlarhrds qgdwrrpwdl dkakptrqgs
      241 skpreegpar vgstrgprsq rklqppplsp dgkgsatrgg qqgrpvvala trskargter
      301 ltgrarrwem kenreepesq egsqstrktr nekeheqtqs rmepggptsa lgttptpasa
      361 sleglkeesg dlaaspaspa spgsppnsdl vpldlslgga sssgpqestc vlsskpgdqe
      421 spvsrleghe qplgstepqa epeaqtcsgp pkeagalepr edrpgkagtq lgltprsrap
      481 rggsqrvrga ggvrsrtggp gpagrc
//
LOCUS       XP_061013570             498 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 9B isoform X3 [Dama dama].
ACCESSION   XP_061013570
VERSION     XP_061013570.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157587.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..498
                     /product="coiled-coil domain-containing protein 9B isoform
                     X3"
                     /calculated_mol_wt=52761
     Region          162..308
                     /region_name="DUF4594"
                     /note="Domain of unknown function (DUF4594); pfam15266"
                     /db_xref="CDD:464604"
     CDS             1..498
                     /gene="CCDC9B"
                     /coded_by="XM_061157587.1:203..1699"
                     /db_xref="GeneID:133066467"
ORIGIN      
        1 mhsagppgae spmsrqeekd aeldrrival rkknqallrr yqeiqedrrq aeqggmavtt
       61 pellrphglt vtisqghtyq iptscspgpl laptpeshsw kgkrvvsrnw arsalgpgaa
      121 seiledeqae ahtgtfclge rvdlavtmen kaeakrivse kptrarnqga egspggglgr
      181 spsmptaiss dsarkgvrep rspalvpgpa pcrapgrple vgwdyaqwkq ereqidqarl
      241 arhrdsqgpr sqrklqpppl spdgkgsatr ggqqgrpvva latrskargt erltgrarrw
      301 emkenreepe sqegsqstrk trnekeheqt qsrmepggpt salgttptpa sasleglkee
      361 sgdlaaspas paspgsppns dlvpldlslg gasssgpqes tcvlsskpgd qespvsrleg
      421 heqplgstep qaepeaqtcs gppkeagale predrpgkag tqlgltprsr aprggsqrvr
      481 gaggvrsrtg gpgpagrc
//
LOCUS       XP_061013571             477 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 9B isoform X4 [Dama dama].
ACCESSION   XP_061013571
VERSION     XP_061013571.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157588.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..477
                     /product="coiled-coil domain-containing protein 9B isoform
                     X4"
                     /calculated_mol_wt=50307
     Region          107..287
                     /region_name="DUF4594"
                     /note="Domain of unknown function (DUF4594); pfam15266"
                     /db_xref="CDD:464604"
     CDS             1..477
                     /gene="CCDC9B"
                     /coded_by="XM_061157588.1:225..1658"
                     /db_xref="GeneID:133066467"
ORIGIN      
        1 mavttpellr phgltvtisq ghtyqiptsc spgpllaptp eshswkgkrv vsrnwarsal
       61 gpgaaseile deqaeahtgt fclgervdla vtmenkaeak rivsekptra rnqgaegspg
      121 gglgrspsmp taissdsark gvreprspal vpgpapcrap grplevgwdy aqwkqereqi
      181 dqarlarhrd sqgdwrrpwd ldkakptrqg sskpreegpa rvgstrgprs qrklqpppls
      241 pdgkgsatrg gqqgrpvval atrskargte rltgrarrwe mkenreepes qegsqstrkt
      301 rnekeheqtq srmepggpts algttptpas asleglkees gdlaaspasp aspgsppnsd
      361 lvpldlslgg asssgpqest cvlsskpgdq espvsrlegh eqplgstepq aepeaqtcsg
      421 ppkeagalep redrpgkagt qlgltprsra prggsqrvrg aggvrsrtgg pgpagrc
//
LOCUS       XP_061013572             477 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 9B isoform X4 [Dama dama].
ACCESSION   XP_061013572
VERSION     XP_061013572.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157589.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..477
                     /product="coiled-coil domain-containing protein 9B isoform
                     X4"
                     /calculated_mol_wt=50307
     Region          107..287
                     /region_name="DUF4594"
                     /note="Domain of unknown function (DUF4594); pfam15266"
                     /db_xref="CDD:464604"
     CDS             1..477
                     /gene="CCDC9B"
                     /coded_by="XM_061157589.1:147..1580"
                     /db_xref="GeneID:133066467"
ORIGIN      
        1 mavttpellr phgltvtisq ghtyqiptsc spgpllaptp eshswkgkrv vsrnwarsal
       61 gpgaaseile deqaeahtgt fclgervdla vtmenkaeak rivsekptra rnqgaegspg
      121 gglgrspsmp taissdsark gvreprspal vpgpapcrap grplevgwdy aqwkqereqi
      181 dqarlarhrd sqgdwrrpwd ldkakptrqg sskpreegpa rvgstrgprs qrklqpppls
      241 pdgkgsatrg gqqgrpvval atrskargte rltgrarrwe mkenreepes qegsqstrkt
      301 rnekeheqtq srmepggpts algttptpas asleglkees gdlaaspasp aspgsppnsd
      361 lvpldlslgg asssgpqest cvlsskpgdq espvsrlegh eqplgstepq aepeaqtcsg
      421 ppkeagalep redrpgkagt qlgltprsra prggsqrvrg aggvrsrtgg pgpagrc
//
LOCUS       XP_061013573             474 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 9B isoform X5 [Dama dama].
ACCESSION   XP_061013573
VERSION     XP_061013573.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157590.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..474
                     /product="coiled-coil domain-containing protein 9B isoform
                     X5"
                     /calculated_mol_wt=49858
     Region          104..284
                     /region_name="DUF4594"
                     /note="Domain of unknown function (DUF4594); pfam15266"
                     /db_xref="CDD:464604"
     CDS             1..474
                     /gene="CCDC9B"
                     /coded_by="XM_061157590.1:63..1487"
                     /db_xref="GeneID:133066467"
ORIGIN      
        1 mpgtasenra llsecfgfps semghcgvlg pwvapgldnl mplgkrvvsr nwarsalgpg
       61 aaseiledeq aeahtgtfcl gervdlavtm enkaeakriv sekptrarnq gaegspgggl
      121 grspsmptai ssdsarkgvr eprspalvpg papcrapgrp levgwdyaqw kqereqidqa
      181 rlarhrdsqg dwrrpwdldk akptrqgssk preegparvg strgprsqrk lqppplspdg
      241 kgsatrggqq grpvvalatr skargterlt grarrwemke nreepesqeg sqstrktrne
      301 keheqtqsrm epggptsalg ttptpasasl eglkeesgdl aaspaspasp gsppnsdlvp
      361 ldlslggass sgpqestcvl sskpgdqesp vsrlegheqp lgstepqaep eaqtcsgppk
      421 eagalepred rpgkagtqlg ltprsraprg gsqrvrgagg vrsrtggpgp agrc
//
LOCUS       XP_061013574             451 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 9B isoform X6 [Dama dama].
ACCESSION   XP_061013574
VERSION     XP_061013574.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157591.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..451
                     /product="coiled-coil domain-containing protein 9B isoform
                     X6"
                     /calculated_mol_wt=47533
     Region          81..261
                     /region_name="DUF4594"
                     /note="Domain of unknown function (DUF4594); pfam15266"
                     /db_xref="CDD:464604"
     CDS             1..451
                     /gene="CCDC9B"
                     /coded_by="XM_061157591.1:147..1502"
                     /db_xref="GeneID:133066467"
ORIGIN      
        1 mavttpellr phgltvtisq gkrvvsrnwa rsalgpgaas eiledeqaea htgtfclger
       61 vdlavtmenk aeakrivsek ptrarnqgae gspggglgrs psmptaissd sarkgvrepr
      121 spalvpgpap crapgrplev gwdyaqwkqe reqidqarla rhrdsqgdwr rpwdldkakp
      181 trqgsskpre egparvgstr gprsqrklqp pplspdgkgs atrggqqgrp vvalatrska
      241 rgterltgra rrwemkenre epesqegsqs trktrnekeh eqtqsrmepg gptsalgttp
      301 tpasaslegl keesgdlaas paspaspgsp pnsdlvpldl slggasssgp qestcvlssk
      361 pgdqespvsr legheqplgs tepqaepeaq tcsgppkeag alepredrpg kagtqlgltp
      421 rsraprggsq rvrgaggvrs rtggpgpagr c
//
LOCUS       XP_061013575             151 aa            linear   MAM 02-DEC-2023
DEFINITION  putative transmembrane protein INAFM2 [Dama dama].
ACCESSION   XP_061013575
VERSION     XP_061013575.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157592.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..151
                     /product="putative transmembrane protein INAFM2"
                     /calculated_mol_wt=15088
     Region          31..63
                     /region_name="InaF-motif"
                     /note="TRP-interacting helix; pfam15018"
                     /db_xref="CDD:464449"
     CDS             1..151
                     /gene="INAFM2"
                     /coded_by="XM_061157592.1:622..1077"
                     /db_xref="GeneID:133066469"
ORIGIN      
        1 mkerdaapae rgkpatytgd kkakmaaktn kkwvrlatvf ayvlsvslaa ivlavyysli
       61 wqpvgagtsg gaagpppggs natgpsgtsg aaagpnntgl srreaprdap plqaarpvsp
      121 epsadspqag pleqprgaed eeeaaaapgs r
//
LOCUS       XP_061013576            1186 aa            linear   MAM 02-DEC-2023
DEFINITION  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2
            isoform X1 [Dama dama].
ACCESSION   XP_061013576
VERSION     XP_061013576.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157593.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1186
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1186
                     /product="1-phosphatidylinositol 4,5-bisphosphate
                     phosphodiesterase beta-2 isoform X1"
                     /calculated_mol_wt=134108
     Region          12..140
                     /region_name="PH_14"
                     /note="PH domain; pfam17787"
                     /db_xref="CDD:465506"
     Region          148..298
                     /region_name="EFh_PI-PLCbeta2"
                     /note="EF-hand motif found in phosphoinositide
                     phospholipase C beta 2 (PI-PLC-beta2); cd16209"
                     /db_xref="CDD:320039"
     Region          148..177
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320039"
     Region          181..210
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320039"
     Region          219..248
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320039"
     Region          265..298
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320039"
     Region          310..647
                     /region_name="PI-PLCc_beta2"
                     /note="Catalytic domain of metazoan
                     phosphoinositide-specific phospholipase C-beta2; cd08624"
                     /db_xref="CDD:176561"
     Site            order(326..327,356,358,373,407,460,462,573,600,602)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176561"
     Site            order(326,373)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176561"
     Site            order(327,356,358,407)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:176561"
     Region          679..800
                     /region_name="C2_PLC_like"
                     /note="C2 domain present in Phosphoinositide-specific
                     phospholipases C (PLC); cd00275"
                     /db_xref="CDD:175974"
     Site            order(698,723,755,759,761)
                     /site_type="other"
                     /note="Ca2+ binding pocket [ion binding]"
                     /db_xref="CDD:175974"
     Region          980..1154
                     /region_name="PLC-beta_C"
                     /note="PLC-beta C terminal; pfam08703"
                     /db_xref="CDD:462571"
     CDS             1..1186
                     /gene="PLCB2"
                     /coded_by="XM_061157593.1:455..4015"
                     /db_xref="GeneID:133066470"
ORIGIN      
        1 msllnpvllp pkvkaylsqg erfikwddet tiaspvilrv dpkgyylywt yqskemelld
       61 itsirdtrfg kfakmpksqk lrevfnmnip dnfllktltv vsgpdmvdlt fhnfvsyken
      121 vgkdwaedvl alakhpltan asrstfldki lvklkmqlnp egkipvknff qmfpadrkrv
      181 eaalsachlp kgkndainpe dfpesvyksf lmslcprpei deiftsyhsk akpymtkehl
      241 akfinqkqrd srlnsllfpp arpdqvqgli dkyepsginv qrgqlspegm vwflcgpens
      301 vlaqdklllh qdmtqplnhy finsshntyl tagqfsglss aemyrqvlla gcrcveldcw
      361 kgkppdeepi ithgftmttd iyfkeaieai aesafktspy pvilsfenhv dsprqqakma
      421 eycrmmfgdm llteplekfp lkpgiplpsp edlrgkilik nkknqfsgpa ssckepdgea
      481 egssppnapv gedtvwagee gaeleeeeve eeeeesgnld eeeikkmqsd egtaglevta
      541 yeemsslvny iqptkfisfe lsaqknrsyv issftelkay dllskssvqf vdynkrqmsr
      601 iypkgtrmds snympqmfwn agcqmvalnf qtmdlpmqqn malfefngqs gyllkhefmr
      661 rsdkqfnpfs vdridvvvat tlsitvisgq flsersvrty vevelfglpg dpkrryrtkl
      721 spstnsinpv wkeepfvfek ilmpelaslr vavmeegnkf lghriipisa lnsgyhhlcl
      781 hnesnmpltm palfvflemk dyvpdtwadl tvalanpikf fsahdkksvk lkeamggqpe
      841 spfplgnhpa nqvngasgpt sngsaaagak areeatkeaa epqtasleel relkgvvklq
      901 rrqekelrel grrgvrrwee llqrgaaqla glgppgaggg ggcrgrklgp gkgsrkkrtl
      961 pgedtagaas aegpegedvr lrelrdslel ellqlgeeqc ecvlklkeqh aaqqmtkmme
     1021 larekqaaer ktlketletd tkemkkklea krleriqamm kvttdkmaqe rlkreinnsh
     1081 iqevvqvikq mtenlerhqe kleekqaacl eqiqemekqf qqeamteyea kmkglemevk
     1141 esvrtclrac fpseeedkpe rpcvvsrelc eqdtlaeqae tqeshl
//
LOCUS       XP_061013577            1185 aa            linear   MAM 02-DEC-2023
DEFINITION  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2
            isoform X2 [Dama dama].
ACCESSION   XP_061013577
VERSION     XP_061013577.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157594.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1185
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1185
                     /product="1-phosphatidylinositol 4,5-bisphosphate
                     phosphodiesterase beta-2 isoform X2"
                     /calculated_mol_wt=134037
     Region          12..140
                     /region_name="PH_14"
                     /note="PH domain; pfam17787"
                     /db_xref="CDD:465506"
     Region          148..298
                     /region_name="EFh_PI-PLCbeta2"
                     /note="EF-hand motif found in phosphoinositide
                     phospholipase C beta 2 (PI-PLC-beta2); cd16209"
                     /db_xref="CDD:320039"
     Region          148..177
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320039"
     Region          181..210
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320039"
     Region          219..248
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320039"
     Region          265..298
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320039"
     Region          310..647
                     /region_name="PI-PLCc_beta2"
                     /note="Catalytic domain of metazoan
                     phosphoinositide-specific phospholipase C-beta2; cd08624"
                     /db_xref="CDD:176561"
     Site            order(326..327,356,358,373,407,460,462,573,600,602)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176561"
     Site            order(326,373)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176561"
     Site            order(327,356,358,407)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:176561"
     Region          679..800
                     /region_name="C2_PLC_like"
                     /note="C2 domain present in Phosphoinositide-specific
                     phospholipases C (PLC); cd00275"
                     /db_xref="CDD:175974"
     Site            order(698,723,755,759,761)
                     /site_type="other"
                     /note="Ca2+ binding pocket [ion binding]"
                     /db_xref="CDD:175974"
     Region          979..1153
                     /region_name="PLC-beta_C"
                     /note="PLC-beta C terminal; pfam08703"
                     /db_xref="CDD:462571"
     CDS             1..1185
                     /gene="PLCB2"
                     /coded_by="XM_061157594.1:457..4014"
                     /db_xref="GeneID:133066470"
ORIGIN      
        1 msllnpvllp pkvkaylsqg erfikwddet tiaspvilrv dpkgyylywt yqskemelld
       61 itsirdtrfg kfakmpksqk lrevfnmnip dnfllktltv vsgpdmvdlt fhnfvsyken
      121 vgkdwaedvl alakhpltan asrstfldki lvklkmqlnp egkipvknff qmfpadrkrv
      181 eaalsachlp kgkndainpe dfpesvyksf lmslcprpei deiftsyhsk akpymtkehl
      241 akfinqkqrd srlnsllfpp arpdqvqgli dkyepsginv qrgqlspegm vwflcgpens
      301 vlaqdklllh qdmtqplnhy finsshntyl tagqfsglss aemyrqvlla gcrcveldcw
      361 kgkppdeepi ithgftmttd iyfkeaieai aesafktspy pvilsfenhv dsprqqakma
      421 eycrmmfgdm llteplekfp lkpgiplpsp edlrgkilik nkknqfsgpa ssckepdgea
      481 egssppnapv gedtvwagee gaeleeeeve eeeeesgnld eeeikkmqsd egtaglevta
      541 yeemsslvny iqptkfisfe lsaqknrsyv issftelkay dllskssvqf vdynkrqmsr
      601 iypkgtrmds snympqmfwn agcqmvalnf qtmdlpmqqn malfefngqs gyllkhefmr
      661 rsdkqfnpfs vdridvvvat tlsitvisgq flsersvrty vevelfglpg dpkrryrtkl
      721 spstnsinpv wkeepfvfek ilmpelaslr vavmeegnkf lghriipisa lnsgyhhlcl
      781 hnesnmpltm palfvflemk dyvpdtwadl tvalanpikf fsahdkksvk lkeamggqpe
      841 spfplgnhpa nqvngasgpt sngsaagaka reeatkeaae pqtasleelr elkgvvklqr
      901 rqekelrelg rrgvrrweel lqrgaaqlag lgppgagggg gcrgrklgpg kgsrkkrtlp
      961 gedtagaasa egpegedvrl relrdslele llqlgeeqce cvlklkeqha aqqmtkmmel
     1021 arekqaaerk tlketletdt kemkkkleak rleriqammk vttdkmaqer lkreinnshi
     1081 qevvqvikqm tenlerhqek leekqaacle qiqemekqfq qeamteyeak mkglemevke
     1141 svrtclracf pseeedkper pcvvsrelce qdtlaeqaet qeshl
//
LOCUS       XP_061013578             688 aa            linear   MAM 02-DEC-2023
DEFINITION  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2
            isoform X3 [Dama dama].
ACCESSION   XP_061013578
VERSION     XP_061013578.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157595.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..688
                     /product="1-phosphatidylinositol 4,5-bisphosphate
                     phosphodiesterase beta-2 isoform X3"
                     /calculated_mol_wt=78132
     Region          12..140
                     /region_name="PH_14"
                     /note="PH domain; pfam17787"
                     /db_xref="CDD:465506"
     Region          148..298
                     /region_name="EFh_PI-PLCbeta2"
                     /note="EF-hand motif found in phosphoinositide
                     phospholipase C beta 2 (PI-PLC-beta2); cd16209"
                     /db_xref="CDD:320039"
     Region          148..177
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320039"
     Region          181..210
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320039"
     Region          219..248
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320039"
     Region          265..298
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320039"
     Region          310..647
                     /region_name="PI-PLCc_beta2"
                     /note="Catalytic domain of metazoan
                     phosphoinositide-specific phospholipase C-beta2; cd08624"
                     /db_xref="CDD:176561"
     Site            order(326..327,356,358,373,407,460,462,573,600,602)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176561"
     Site            order(326,373)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176561"
     Site            order(327,356,358,407)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:176561"
     CDS             1..688
                     /gene="PLCB2"
                     /coded_by="XM_061157595.1:474..2540"
                     /db_xref="GeneID:133066470"
ORIGIN      
        1 msllnpvllp pkvkaylsqg erfikwddet tiaspvilrv dpkgyylywt yqskemelld
       61 itsirdtrfg kfakmpksqk lrevfnmnip dnfllktltv vsgpdmvdlt fhnfvsyken
      121 vgkdwaedvl alakhpltan asrstfldki lvklkmqlnp egkipvknff qmfpadrkrv
      181 eaalsachlp kgkndainpe dfpesvyksf lmslcprpei deiftsyhsk akpymtkehl
      241 akfinqkqrd srlnsllfpp arpdqvqgli dkyepsginv qrgqlspegm vwflcgpens
      301 vlaqdklllh qdmtqplnhy finsshntyl tagqfsglss aemyrqvlla gcrcveldcw
      361 kgkppdeepi ithgftmttd iyfkeaieai aesafktspy pvilsfenhv dsprqqakma
      421 eycrmmfgdm llteplekfp lkpgiplpsp edlrgkilik nkknqfsgpa ssckepdgea
      481 egssppnapv gedtvwagee gaeleeeeve eeeeesgnld eeeikkmqsd egtaglevta
      541 yeemsslvny iqptkfisfe lsaqknrsyv issftelkay dllskssvqf vdynkrqmsr
      601 iypkgtrmds snympqmfwn agcqmvalnf qtmdlpmqqn malfefngqs gyllkhefmr
      661 rsdkqfnpfs vdridvvvat tlsitarp
//
LOCUS       XP_061013580             382 aa            linear   MAM 02-DEC-2023
DEFINITION  ankyrin repeat domain-containing protein 63 [Dama dama].
ACCESSION   XP_061013580
VERSION     XP_061013580.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157597.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..382
                     /product="ankyrin repeat domain-containing protein 63"
                     /calculated_mol_wt=39947
     Region          <12..173
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          47..81
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(48,52..53,56..58,60..61,69,72,81,83,85,89..90,
                     93..95,97..98,102,105,114,116,118,122..123,126..128,
                     130..131,135,138)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          83..114
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..382
                     /gene="ANKRD63"
                     /coded_by="XM_061157597.1:823..1971"
                     /db_xref="GeneID:133066471"
ORIGIN      
        1 mlkpkdlcpr agtrtfleam qagkvhlarf vldaldrsii dcraeqgrtp lmvavglpdp
       61 alrarfvrll leqgaavnlr dergrtalsl acerghldav qllvqfsgdp eaadsagnsp
      121 vmwaaacghg avleflvrsf rrlglrldrt nragltalql aaarghgtcv qaltgpwgra
      181 aaaaaargsn sdsppgrpvp apsperrrps prrlprplla rfaraagghg hggeagsggk
      241 gfgrhraqgc erpelgrsms lalgavteee aarlragalm tlphspqssg agrwrsqevl
      301 egapptlvqa piglsphpeg dpgsgrlglr rrstapdips lvgeasgpes gqelepnalp
      361 hsvpgpqpwq ggteavvlha qr
//
LOCUS       XP_061013581            1062 aa            linear   MAM 02-DEC-2023
DEFINITION  mitotic checkpoint serine/threonine-protein kinase BUB1 beta [Dama
            dama].
ACCESSION   XP_061013581
VERSION     XP_061013581.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157598.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1062
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1062
                     /product="mitotic checkpoint serine/threonine-protein
                     kinase BUB1 beta"
                     /calculated_mol_wt=120658
     Region          58..180
                     /region_name="Mad3_BUB1_I"
                     /note="Mad3/BUB1 homology region 1; pfam08311"
                     /db_xref="CDD:462420"
     Region          <386..494
                     /region_name="DUF4670"
                     /note="Domain of unknown function (DUF4670); pfam15709"
                     /db_xref="CDD:464815"
     Region          751..1046
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(762..765,768,770,794,796,825,838..841,883,887..888,
                     890,911..912)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..1062
                     /gene="BUB1B"
                     /coded_by="XM_061157598.1:211..3399"
                     /db_xref="GeneID:133066473"
ORIGIN      
        1 maamqkerga pseamslegd ewelskenvq plrqgrimst lqgalaqqds acnsalqqqk
       61 rafeseirfy agndpldvwd ryinwteqny pqggkesnms tlleraveal qgekryyndp
      121 rflslwlklg hlcnepldmy sylhnqgigi slaqfyiswa eeyearenfk kadlifqegi
      181 eqkaeplerl qsqhrqfqar vsrqtllale keeeeevvgs svpqrstlae lkskgkktar
      241 apisrvggal kapsqnrglq npvpqqmqsn sriivfdens deasraessk ptvqpwiapp
      301 vsrgkenelq agpwntgrpl eyrprgntas mtavpsmlps ftpyveetaq qpvmtpckie
      361 psinhilstr kpgkeegdll krvqslqqee sekkekmmyc kekiyagvge fsfeeiraev
      421 frkklkerre aelltsaekr aemqkqieem ekklkeiqtt rqeraseqqe ekmstketae
      481 lriasesqei agiagsnfvc pvnscarets laenvwqeqp hsksssvpfs ifdesllsek
      541 kpvspsaaps rvlaqrrpla ilktsesits nedvspdvcd eftgieplse daiitdfrnv
      601 ticpnpedtc dfaraarfas tpfheiislk dlpsdperll qeedldvkts edqqtacgti
      661 ynpplsikkl spiiedsrea thssgfsgss asvtstssik slqipeklel tsetadsptq
      721 spwcsqyrrq lvkslpelsv steffvedrp mpnleiekei eldneeycir qeylvcedyk
      781 lfwvtprnta eltiikvssq pvpwdfyinf klkerlneec dnlctcyqyq dgcivwhqyi
      841 ncftlqdllq hsefithemt vliiynlltm veklhkaeiv hgdlsprsli lrnrihdpyd
      901 fnknnqalki vdfsysvdlr aqldvfnlsg frtvqtlegq kilancsspy qvdlfgiadl
      961 ahlllfkehl qvfwdgslwk lsqniselkd gelwnkfflr ilnasdestv svlgelaaem
     1021 ngvfdttfqs hlnkafwkvg klispgaflf qqdrqsssqi pa
//
LOCUS       XP_061013582             681 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase PAK 6 [Dama dama].
ACCESSION   XP_061013582
VERSION     XP_061013582.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157599.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..681
                     /product="serine/threonine-protein kinase PAK 6"
                     /calculated_mol_wt=74444
     Region          11..67
                     /region_name="PBD"
                     /note="P21-Rho-binding domain; pfam00786"
                     /db_xref="CDD:395634"
     Site            order(12,15,18,20,23,40,44)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238526"
     Region          385..681
                     /region_name="STKc_PAK6"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     p21-activated kinase 6; cd06659"
                     /db_xref="CDD:270821"
     Site            order(413..417,421,434,436,465,481..485,487..488,491,526,
                     528..531,533,543..544,547,560..564,566,593,602..604)
                     /site_type="active"
                     /db_xref="CDD:270821"
     Site            order(413..417,421,434,436,465,481..485,487..488,491,
                     530..531,533,543..544)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270821"
     Site            order(416..417,445,526,528..530,547,560..564,566,593,
                     602..604)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270821"
     Site            543..566
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270821"
     CDS             1..681
                     /gene="PAK6"
                     /coded_by="XM_061157599.1:259..2304"
                     /db_xref="GeneID:133066474"
ORIGIN      
        1 mfrkkkkkrp eisapqnfqh rvhtsfdpke gkfvglppqw qnildtlrrp kpvvdpsrit
       61 rvqlqpmktv vrgssvptdg yisgllndiq klsvissntl rgrsptsrrr aqslgllgde
      121 qwatdpdmyl qspqsersdp hglylscngg apagrrqvpw pelqsprvlp nglaakaqsl
      181 gpaefqgatq rclqlatcmq ssptgtspst atgrrgtkta rrgpeearpq sclvasatgr
      241 pggegspspk tqesslkrrl frsmflsapa tappssskpg ppaqskpsss frpalkggpp
      301 slvvkaqslp sdqpvgpfsp lttsdtsspq kslraapaag pppgrsspag sprtrhaqis
      361 tsnlylpqdp avakgalage dtgvvtheqf kaalrmvvdq gdprllldsy vkigegstgi
      421 vclarekhsg rqvavkmmdl rkqqrrellf nevvimrdyq hlnvvemyks ylvgeelwvl
      481 meflqggalt divsqvrlne eqiatvceav lqalaylhaq gvihrdiksd silltldgrv
      541 klsdfgfcaq iskdvpkrks lvgtpywmap evisrslyat evdiwslgim viemvdgepp
      601 yfsdspvqam krlrdspppk lknshkvspv lrdflermlv rdpqerataq elldhpfllq
      661 tglpeclvpl iqlyrkqtsn c
//
LOCUS       XP_061013583             681 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase PAK 6 [Dama dama].
ACCESSION   XP_061013583
VERSION     XP_061013583.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157600.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..681
                     /product="serine/threonine-protein kinase PAK 6"
                     /calculated_mol_wt=74444
     Region          11..67
                     /region_name="PBD"
                     /note="P21-Rho-binding domain; pfam00786"
                     /db_xref="CDD:395634"
     Site            order(12,15,18,20,23,40,44)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238526"
     Region          385..681
                     /region_name="STKc_PAK6"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     p21-activated kinase 6; cd06659"
                     /db_xref="CDD:270821"
     Site            order(413..417,421,434,436,465,481..485,487..488,491,526,
                     528..531,533,543..544,547,560..564,566,593,602..604)
                     /site_type="active"
                     /db_xref="CDD:270821"
     Site            order(413..417,421,434,436,465,481..485,487..488,491,
                     530..531,533,543..544)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270821"
     Site            order(416..417,445,526,528..530,547,560..564,566,593,
                     602..604)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270821"
     Site            543..566
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270821"
     CDS             1..681
                     /gene="PAK6"
                     /coded_by="XM_061157600.1:524..2569"
                     /db_xref="GeneID:133066474"
ORIGIN      
        1 mfrkkkkkrp eisapqnfqh rvhtsfdpke gkfvglppqw qnildtlrrp kpvvdpsrit
       61 rvqlqpmktv vrgssvptdg yisgllndiq klsvissntl rgrsptsrrr aqslgllgde
      121 qwatdpdmyl qspqsersdp hglylscngg apagrrqvpw pelqsprvlp nglaakaqsl
      181 gpaefqgatq rclqlatcmq ssptgtspst atgrrgtkta rrgpeearpq sclvasatgr
      241 pggegspspk tqesslkrrl frsmflsapa tappssskpg ppaqskpsss frpalkggpp
      301 slvvkaqslp sdqpvgpfsp lttsdtsspq kslraapaag pppgrsspag sprtrhaqis
      361 tsnlylpqdp avakgalage dtgvvtheqf kaalrmvvdq gdprllldsy vkigegstgi
      421 vclarekhsg rqvavkmmdl rkqqrrellf nevvimrdyq hlnvvemyks ylvgeelwvl
      481 meflqggalt divsqvrlne eqiatvceav lqalaylhaq gvihrdiksd silltldgrv
      541 klsdfgfcaq iskdvpkrks lvgtpywmap evisrslyat evdiwslgim viemvdgepp
      601 yfsdspvqam krlrdspppk lknshkvspv lrdflermlv rdpqerataq elldhpfllq
      661 tglpeclvpl iqlyrkqtsn c
//
LOCUS       XP_061013584             184 aa            linear   MAM 02-DEC-2023
DEFINITION  bcl-2-modifying factor [Dama dama].
ACCESSION   XP_061013584
VERSION     XP_061013584.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157601.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..184
                     /product="bcl-2-modifying factor"
                     /calculated_mol_wt=20491
     Region          4..184
                     /region_name="BMF"
                     /note="Bcl-2-modifying factor, apoptosis; pfam15185"
                     /db_xref="CDD:291841"
     CDS             1..184
                     /gene="BMF"
                     /coded_by="XM_061157601.1:1225..1779"
                     /db_xref="GeneID:133066476"
ORIGIN      
        1 meppqcveel eddvfqpedg epgtqprsll sadlfaqsql dcplsrlqlf plthccgpgl
       61 rptsqedkat qtlspaspsq gvmlpcgvte epqrlfygna gyrlplpasf paglplgeqp
      121 pegqwqhrae iqiarklqci adqfhrlhmq qhqqnrnrvw wqillflhnv alngdenrng
      181 agpr
//
LOCUS       XP_061013585             184 aa            linear   MAM 02-DEC-2023
DEFINITION  bcl-2-modifying factor [Dama dama].
ACCESSION   XP_061013585
VERSION     XP_061013585.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157602.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..184
                     /product="bcl-2-modifying factor"
                     /calculated_mol_wt=20491
     Region          4..184
                     /region_name="BMF"
                     /note="Bcl-2-modifying factor, apoptosis; pfam15185"
                     /db_xref="CDD:291841"
     CDS             1..184
                     /gene="BMF"
                     /coded_by="XM_061157602.1:226..780"
                     /db_xref="GeneID:133066476"
ORIGIN      
        1 meppqcveel eddvfqpedg epgtqprsll sadlfaqsql dcplsrlqlf plthccgpgl
       61 rptsqedkat qtlspaspsq gvmlpcgvte epqrlfygna gyrlplpasf paglplgeqp
      121 pegqwqhrae iqiarklqci adqfhrlhmq qhqqnrnrvw wqillflhnv alngdenrng
      181 agpr
//
LOCUS       XP_061013586             184 aa            linear   MAM 02-DEC-2023
DEFINITION  bcl-2-modifying factor [Dama dama].
ACCESSION   XP_061013586
VERSION     XP_061013586.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157603.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..184
                     /product="bcl-2-modifying factor"
                     /calculated_mol_wt=20491
     Region          4..184
                     /region_name="BMF"
                     /note="Bcl-2-modifying factor, apoptosis; pfam15185"
                     /db_xref="CDD:291841"
     CDS             1..184
                     /gene="BMF"
                     /coded_by="XM_061157603.1:126..680"
                     /db_xref="GeneID:133066476"
ORIGIN      
        1 meppqcveel eddvfqpedg epgtqprsll sadlfaqsql dcplsrlqlf plthccgpgl
       61 rptsqedkat qtlspaspsq gvmlpcgvte epqrlfygna gyrlplpasf paglplgeqp
      121 pegqwqhrae iqiarklqci adqfhrlhmq qhqqnrnrvw wqillflhnv alngdenrng
      181 agpr
//
LOCUS       XP_061013587             184 aa            linear   MAM 02-DEC-2023
DEFINITION  bcl-2-modifying factor [Dama dama].
ACCESSION   XP_061013587
VERSION     XP_061013587.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157604.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..184
                     /product="bcl-2-modifying factor"
                     /calculated_mol_wt=20491
     Region          4..184
                     /region_name="BMF"
                     /note="Bcl-2-modifying factor, apoptosis; pfam15185"
                     /db_xref="CDD:291841"
     CDS             1..184
                     /gene="BMF"
                     /coded_by="XM_061157604.1:587..1141"
                     /db_xref="GeneID:133066476"
ORIGIN      
        1 meppqcveel eddvfqpedg epgtqprsll sadlfaqsql dcplsrlqlf plthccgpgl
       61 rptsqedkat qtlspaspsq gvmlpcgvte epqrlfygna gyrlplpasf paglplgeqp
      121 pegqwqhrae iqiarklqci adqfhrlhmq qhqqnrnrvw wqillflhnv alngdenrng
      181 agpr
//
LOCUS       XP_061013588             184 aa            linear   MAM 02-DEC-2023
DEFINITION  bcl-2-modifying factor [Dama dama].
ACCESSION   XP_061013588
VERSION     XP_061013588.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157605.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..184
                     /product="bcl-2-modifying factor"
                     /calculated_mol_wt=20491
     Region          4..184
                     /region_name="BMF"
                     /note="Bcl-2-modifying factor, apoptosis; pfam15185"
                     /db_xref="CDD:291841"
     CDS             1..184
                     /gene="BMF"
                     /coded_by="XM_061157605.1:744..1298"
                     /db_xref="GeneID:133066476"
ORIGIN      
        1 meppqcveel eddvfqpedg epgtqprsll sadlfaqsql dcplsrlqlf plthccgpgl
       61 rptsqedkat qtlspaspsq gvmlpcgvte epqrlfygna gyrlplpasf paglplgeqp
      121 pegqwqhrae iqiarklqci adqfhrlhmq qhqqnrnrvw wqillflhnv alngdenrng
      181 agpr
//
LOCUS       XP_061013589             184 aa            linear   MAM 02-DEC-2023
DEFINITION  bcl-2-modifying factor [Dama dama].
ACCESSION   XP_061013589
VERSION     XP_061013589.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157606.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..184
                     /product="bcl-2-modifying factor"
                     /calculated_mol_wt=20491
     Region          4..184
                     /region_name="BMF"
                     /note="Bcl-2-modifying factor, apoptosis; pfam15185"
                     /db_xref="CDD:291841"
     CDS             1..184
                     /gene="BMF"
                     /coded_by="XM_061157606.1:318..872"
                     /db_xref="GeneID:133066476"
ORIGIN      
        1 meppqcveel eddvfqpedg epgtqprsll sadlfaqsql dcplsrlqlf plthccgpgl
       61 rptsqedkat qtlspaspsq gvmlpcgvte epqrlfygna gyrlplpasf paglplgeqp
      121 pegqwqhrae iqiarklqci adqfhrlhmq qhqqnrnrvw wqillflhnv alngdenrng
      181 agpr
//
LOCUS       XP_061013591            1650 aa            linear   MAM 02-DEC-2023
DEFINITION  eIF-2-alpha kinase GCN2 isoform X1 [Dama dama].
ACCESSION   XP_061013591
VERSION     XP_061013591.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157608.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1650
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1650
                     /product="eIF-2-alpha kinase GCN2 isoform X1"
                     /calculated_mol_wt=186604
     Region          21..138
                     /region_name="RWD_GCN2"
                     /note="RWD domain of eIF-2-alpha kinase GCN2 and related
                     proteins; cd23823"
                     /db_xref="CDD:467659"
     Region          299..538
                     /region_name="PK_eIF2AK_GCN2_rpt1"
                     /note="Pseudokinase domain, repeat 1, of eukaryotic
                     translation Initiation Factor 2-Alpha Kinase 4 or General
                     Control Non-derepressible-2; cd14012"
                     /db_xref="CDD:270914"
     Region          583..1000
                     /region_name="STKc_EIF2AK4_GCN2_rpt2"
                     /note="Catalytic domain, repeat 2, of the Serine/Threonine
                     kinase, eukaryotic translation Initiation Factor 2-Alpha
                     Kinase 4 or General Control Non-derepressible-2; cd14046"
                     /db_xref="CDD:270948"
     Site            order(583..585,588..589,634..635,638..639,641..642,644,
                     650..658,660,798,838,841..843)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:270948"
     Site            order(596..597,602,604,617,619,802..805,809,852..853,855,
                     866,905..907,940,942,944..950)
                     /site_type="active"
                     /db_xref="CDD:270948"
     Site            order(596..597,604,617,619,649,802..805,848,850,853,855,
                     866)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270948"
     Site            order(865..874,881..888,890,896..907)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270948"
     Site            order(905..907,940,942,944..950)
                     /site_type="other"
                     /note="eIF2alpha (substrate) binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270948"
     Region          <1052..1492
                     /region_name="PLN02972"
                     /note="Histidyl-tRNA synthetase"
                     /db_xref="CDD:215525"
     Region          1398..1642
                     /region_name="HGTP_anticodon"
                     /note="HGTP anticodon binding domain, as found at the
                     C-terminus of histidyl, glycyl, threonyl and prolyl tRNA
                     synthetases, which are classified as a group of class II
                     aminoacyl-tRNA synthetases (aaRS). In aaRSs, the anticodon
                     binding domain is responsible for...; cl00266"
                     /db_xref="CDD:469699"
     CDS             1..1650
                     /gene="EIF2AK4"
                     /coded_by="XM_061157608.1:71..5023"
                     /db_xref="GeneID:133066478"
ORIGIN      
        1 maggrgapgr grdeppesyp qrqdhelqal eaiygadfqd lrpdargrvk eppeinlvly
       61 prgltgeevy vkvdlrvkcp ptypdvvpei elknakglsn esvnllksrl eemakkhcge
      121 vmifelayhv qsflcehnkp ppksfheeml erraqeeqrr qleakrkeee eqreilheiq
      181 krkeeikeek krkemakqer leiaslsnqd htsrkdpggl rtaailhggs pdfvgngkhr
      241 tnssgrsrre rqysmcssed spgsceilyf svgspdqlmv hkgkcigsde qlgklvynal
      301 etatgnfvll yewvlqwhkk mgpfltnqek ekidkckkqi qgaetefssl vklshpnivr
      361 yfamnlkeqd dcivvdilve htsgislaah lghsgpipvh qlrkyaaqll sglgylhsns
      421 vvhkvlsasn vlvdaegtvk itdysiskrl adickedvfe qtrvrfsdsa lpyktgkkgd
      481 iwrlglllls lsqgqeceey pvtiprdlpa dfqdflkkcv clddkerwsp qqllkhsfin
      541 pqpkiplleq spedsggqdy vetvipsnql psaaffsetq rqfsryfief eelqllgkga
      601 fgavikvqnk ldgccyavkr ipinpasrhf rrikgevtll srlhhenivr yynawierhe
      661 rpagpatppp ncsgpqaqdg qaltqpagds dpdgpgsvea aapppilsss vewstsgers
      721 astrfpaagp dsssdeddde eqgvfsqsfl pasdsdsdii fdnedensks qnqdedcngk
      781 nscheseppa tteavhylyi qmeycekstl rdtidqglyr dtvrlwrlfr eildglayih
      841 ekgmihrdlk pvnifldsdd hvkigdfgla tdhlafaadg kqddtsgdhl iksdpsghlt
      901 gmvgtalyvs pevqgstksa ynqkvdlfsl giiffemsyh pmvtaserif vlnqlrdpts
      961 pkfpedfddg ehakqksvis wllnhdpakr ptatellkse llpppqmees elhevlhhtl
     1021 anvdgkayrt mmgqifaqri spaidytyds dilkgsfsir takiqqhvce tiirifkrhg
     1081 avqlctplll prnrqiyehn eaalfmdhsg mlvmlpfdlr vpfaryvarn nilnlkryci
     1141 ervfrprkld rfhpkellec afdivtsttn sslptaeviy tiyeiiqefp alqernysiy
     1201 lnhtmllkai llhcgipedk lsqvyvilyd avtekltrre veakfcnlsl ssnslcrlyk
     1261 fieqkgelqd ltptinslik qktgvaqlvk yglkdleevv gllkklgikl qvlinlglvy
     1321 kvqqhsgiif qfvafirrrq raiseilaag grydllipqf rgpqalgpvp taigvsiaid
     1381 kittavlnme epvtvsscdl lvvsvgqmsm srainltqkl wsagitaeim ydwsqsqeel
     1441 qeycrhheit yvalvsdkeg shvkvksfek drqtekrvle sdlvdhvvqk lrtkvsdert
     1501 treasdnltv qnlkgsfsna sglfeihgat vvpivsvvap eklsastrrr yetqvqtrlq
     1561 tslanlhqks seieilavdl pketilqfls lewdadeqaf nttvkqllsr lpkqrylklv
     1621 cdeiynikve kkvsvlflys yrddyyrilf
//
LOCUS       XP_061013592            1599 aa            linear   MAM 02-DEC-2023
DEFINITION  eIF-2-alpha kinase GCN2 isoform X2 [Dama dama].
ACCESSION   XP_061013592
VERSION     XP_061013592.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157609.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1599
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1599
                     /product="eIF-2-alpha kinase GCN2 isoform X2"
                     /calculated_mol_wt=180310
     Region          21..128
                     /region_name="RWD_GCN2"
                     /note="RWD domain of eIF-2-alpha kinase GCN2 and related
                     proteins; cd23823"
                     /db_xref="CDD:467659"
     Region          248..487
                     /region_name="PK_eIF2AK_GCN2_rpt1"
                     /note="Pseudokinase domain, repeat 1, of eukaryotic
                     translation Initiation Factor 2-Alpha Kinase 4 or General
                     Control Non-derepressible-2; cd14012"
                     /db_xref="CDD:270914"
     Region          532..949
                     /region_name="STKc_EIF2AK4_GCN2_rpt2"
                     /note="Catalytic domain, repeat 2, of the Serine/Threonine
                     kinase, eukaryotic translation Initiation Factor 2-Alpha
                     Kinase 4 or General Control Non-derepressible-2; cd14046"
                     /db_xref="CDD:270948"
     Site            order(532..534,537..538,583..584,587..588,590..591,593,
                     599..607,609,747,787,790..792)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:270948"
     Site            order(545..546,551,553,566,568,751..754,758,801..802,804,
                     815,854..856,889,891,893..899)
                     /site_type="active"
                     /db_xref="CDD:270948"
     Site            order(545..546,553,566,568,598,751..754,797,799,802,804,
                     815)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270948"
     Site            order(814..823,830..837,839,845..856)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270948"
     Site            order(854..856,889,891,893..899)
                     /site_type="other"
                     /note="eIF2alpha (substrate) binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270948"
     Region          <1001..1441
                     /region_name="PLN02972"
                     /note="Histidyl-tRNA synthetase"
                     /db_xref="CDD:215525"
     Region          1347..1591
                     /region_name="HGTP_anticodon"
                     /note="HGTP anticodon binding domain, as found at the
                     C-terminus of histidyl, glycyl, threonyl and prolyl tRNA
                     synthetases, which are classified as a group of class II
                     aminoacyl-tRNA synthetases (aaRS). In aaRSs, the anticodon
                     binding domain is responsible for...; cl00266"
                     /db_xref="CDD:469699"
     CDS             1..1599
                     /gene="EIF2AK4"
                     /coded_by="XM_061157609.1:71..4870"
                     /db_xref="GeneID:133066478"
ORIGIN      
        1 maggrgapgr grdeppesyp qrqdhelqal eaiygadfqd lrpdargrvk eppeinlvly
       61 prgltgeevy vkvdlrvkcp ptypdvvpei elknakglsn esvnllksrl eemakkhcge
      121 qreilheiqk rkeeikeekk rkemakqerl eiaslsnqdh tsrkdpgglr taailhggsp
      181 dfvgngkhrt nssgrsrrer qysmcsseds pgsceilyfs vgspdqlmvh kgkcigsdeq
      241 lgklvynale tatgnfvlly ewvlqwhkkm gpfltnqeke kidkckkqiq gaetefsslv
      301 klshpnivry famnlkeqdd civvdilveh tsgislaahl ghsgpipvhq lrkyaaqlls
      361 glgylhsnsv vhkvlsasnv lvdaegtvki tdysiskrla dickedvfeq trvrfsdsal
      421 pyktgkkgdi wrlgllllsl sqgqeceeyp vtiprdlpad fqdflkkcvc lddkerwspq
      481 qllkhsfinp qpkiplleqs pedsggqdyv etvipsnqlp saaffsetqr qfsryfiefe
      541 elqllgkgaf gavikvqnkl dgccyavkri pinpasrhfr rikgevtlls rlhhenivry
      601 ynawierher pagpatpppn csgpqaqdgq altqpagdsd pdgpgsveaa apppilsssv
      661 ewstsgersa strfpaagpd sssdedddee qgvfsqsflp asdsdsdiif dnedensksq
      721 nqdedcngkn scheseppat teavhylyiq meycekstlr dtidqglyrd tvrlwrlfre
      781 ildglayihe kgmihrdlkp vnifldsddh vkigdfglat dhlafaadgk qddtsgdhli
      841 ksdpsghltg mvgtalyvsp evqgstksay nqkvdlfslg iiffemsyhp mvtaserifv
      901 lnqlrdptsp kfpedfddge hakqksvisw llnhdpakrp tatellksel lpppqmeese
      961 lhevlhhtla nvdgkayrtm mgqifaqris paidytydsd ilkgsfsirt akiqqhvcet
     1021 iirifkrhga vqlctplllp rnrqiyehne aalfmdhsgm lvmlpfdlrv pfaryvarnn
     1081 ilnlkrycie rvfrprkldr fhpkelleca fdivtsttns slptaeviyt iyeiiqefpa
     1141 lqernysiyl nhtmllkail lhcgipedkl sqvyvilyda vtekltrrev eakfcnlsls
     1201 snslcrlykf ieqkgelqdl tptinslikq ktgvaqlvky glkdleevvg llkklgiklq
     1261 vlinlglvyk vqqhsgiifq fvafirrrqr aiseilaagg rydllipqfr gpqalgpvpt
     1321 aigvsiaidk ittavlnmee pvtvsscdll vvsvgqmsms rainltqklw sagitaeimy
     1381 dwsqsqeelq eycrhheity valvsdkegs hvkvksfekd rqtekrvles dlvdhvvqkl
     1441 rtkvsdertt reasdnltvq nlkgsfsnas glfeihgatv vpivsvvape klsastrrry
     1501 etqvqtrlqt slanlhqkss eieilavdlp ketilqflsl ewdadeqafn ttvkqllsrl
     1561 pkqrylklvc deiynikvek kvsvlflysy rddyyrilf
//
LOCUS       XP_061013593             515 aa            linear   MAM 02-DEC-2023
DEFINITION  G-protein coupled receptor 176 isoform X1 [Dama dama].
ACCESSION   XP_061013593
VERSION     XP_061013593.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157610.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..515
                     /product="G-protein coupled receptor 176 isoform X1"
                     /calculated_mol_wt=56824
     Region          43..331
                     /region_name="7tmA_GPR176"
                     /note="orphan G protein-coupled receptor 176, member of
                     the rhodopsin-like class A GPCR family; cd15006"
                     /db_xref="CDD:320135"
     Region          43..69
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320135"
     Region          76..102
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320135"
     Site            order(98,101..102,117..122,124..125,128,171,173..177,202,
                     205..207,209..211,213..214,279,282..283,285..286,289,
                     298..299,301..303,306,309..310)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320135"
     Region          117..147
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320135"
     Region          158..179
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320135"
     Region          202..231
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320135"
     Region          259..289
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320135"
     Region          299..324
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320135"
     CDS             1..515
                     /gene="GPR176"
                     /coded_by="XM_061157610.1:377..1924"
                     /db_xref="GeneID:133066479"
ORIGIN      
        1 mghngswisr naseprnvss aeaaganrsa lgefgeaqly rqftttvqvv ifigsllgnf
       61 mvlwstcrtt vfksvtnrfi knlacsgica slvcvpfdii lstsphccww iytmlfckvv
      121 kflhkvfcsv tilsfpaial dryysvlypl erkisdaksr elviyiwaha vvasvpgfav
      181 tnvadiyams tctevwshsl ghlvyvlvyn ittvivpvav affflilirr alsasqkkkv
      241 iiaalrtpqn tisipyasqr eaelhatlls mvmvfilcsv pyatlvvyqt vlnvpdtsvf
      301 llltaiwlpk vsllanpvlf ltvnksvrkc lvgtlvqlhh rysrrnvvgt gsgmadasle
      361 psmrsgsqll emfhigqqqi fkptedeees eakypgsgal qakellptcl eaelgpqfat
      421 papppgtvds isqvapavsm esetfpdkys lqfgfgpfel ppqwlsetrn skkrllpplg
      481 ntpeeliqtk ipkvgrverk msrnnkvsif pkvds
//
LOCUS       XP_061013594             478 aa            linear   MAM 02-DEC-2023
DEFINITION  G-protein coupled receptor 176 isoform X2 [Dama dama].
ACCESSION   XP_061013594
VERSION     XP_061013594.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157611.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..478
                     /product="G-protein coupled receptor 176 isoform X2"
                     /calculated_mol_wt=52865
     Region          21..294
                     /region_name="7tmA_GPR176"
                     /note="orphan G protein-coupled receptor 176, member of
                     the rhodopsin-like class A GPCR family; cd15006"
                     /db_xref="CDD:320135"
     Region          39..65
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320135"
     Site            order(61,64..65,80..85,87..88,91,134,136..140,165,
                     168..170,172..174,176..177,242,245..246,248..249,252,
                     261..262,264..266,269,272..273)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320135"
     Region          80..110
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320135"
     Region          121..142
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320135"
     Region          165..194
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320135"
     Region          222..252
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320135"
     Region          262..287
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320135"
     CDS             1..478
                     /gene="GPR176"
                     /coded_by="XM_061157611.1:659..2095"
                     /db_xref="GeneID:133066479"
ORIGIN      
        1 mgphecavvs npkrqaskea gnfmvlwstc rttvfksvtn rfiknlacsg icaslvcvpf
       61 diilstsphc cwwiytmlfc kvvkflhkvf csvtilsfpa ialdryysvl yplerkisda
      121 ksrelviyiw ahavvasvpg favtnvadiy amstctevws hslghlvyvl vynittvivp
      181 vavaffflil irralsasqk kkviiaalrt pqntisipya sqreaelhat llsmvmvfil
      241 csvpyatlvv yqtvlnvpdt svfllltaiw lpkvsllanp vlfltvnksv rkclvgtlvq
      301 lhhrysrrnv vgtgsgmada slepsmrsgs qllemfhigq qqifkptede eeseakypgs
      361 galqakellp tcleaelgpq fatpapppgt vdsisqvapa vsmesetfpd kyslqfgfgp
      421 felppqwlse trnskkrllp plgntpeeli qtkipkvgrv erkmsrnnkv sifpkvds
//
LOCUS       XP_061013595             110 aa            linear   MAM 02-DEC-2023
DEFINITION  signal recognition particle 14 kDa protein [Dama dama].
ACCESSION   XP_061013595
VERSION     XP_061013595.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157612.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..110
                     /product="signal recognition particle 14 kDa protein"
                     /calculated_mol_wt=12329
     Region          4..94
                     /region_name="SRP14"
                     /note="Signal recognition particle 14kD protein;
                     pfam02290"
                     /db_xref="CDD:460524"
     CDS             1..110
                     /gene="SRP14"
                     /coded_by="XM_061157612.1:81..413"
                     /db_xref="GeneID:133066480"
ORIGIN      
        1 mvlleseqfl teltrlfqkc rlsgsvfitl kkydgrtkpi prkgsvegfe psdnkcllra
       61 tdgkkkistv vsskevnkfq maysnllran mdglkkrdkk skskkskaaq
//
LOCUS       XP_061013596            1171 aa            linear   MAM 02-DEC-2023
DEFINITION  thrombospondin-1 isoform X1 [Dama dama].
ACCESSION   XP_061013596
VERSION     XP_061013596.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157613.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1171
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1171
                     /product="thrombospondin-1 isoform X1"
                     /calculated_mol_wt=129204
     Region          26..221
                     /region_name="TSPN"
                     /note="Thrombospondin N-terminal -like domains;
                     smart00210"
                     /db_xref="CDD:214560"
     Region          318..372
                     /region_name="VWC"
                     /note="von Willebrand factor type C domain; pfam00093"
                     /db_xref="CDD:278520"
     Region          384..429
                     /region_name="TSP_1"
                     /note="Thrombospondin type 1 domain; pfam00090"
                     /db_xref="CDD:459668"
     Region          439..491
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          496..548
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          651..690
                     /region_name="EGF_3"
                     /note="EGF domain; pfam12947"
                     /db_xref="CDD:463759"
     Region          692..727
                     /region_name="TSP3 repeat_1C"
                     /note="TSP3 repeat_1C [structural motif]"
                     /db_xref="CDD:275367"
     Region          764..786
                     /region_name="TSP3 repeat_short"
                     /note="TSP3 repeat_short [structural motif]"
                     /db_xref="CDD:275365"
     Region          787..822
                     /region_name="TSP_3"
                     /note="Thrombospondin type 3 repeat; pfam02412"
                     /db_xref="CDD:367074"
     Region          788..822
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275366"
     Region          823..845
                     /region_name="TSP3 repeat_short"
                     /note="TSP3 repeat_short [structural motif]"
                     /db_xref="CDD:275366"
     Region          846..883
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275365"
     Region          847..883
                     /region_name="TSP_3"
                     /note="Thrombospondin type 3 repeat; pfam02412"
                     /db_xref="CDD:367074"
     Region          884..919
                     /region_name="TSP3 repeat_short"
                     /note="TSP3 repeat_short [structural motif]"
                     /db_xref="CDD:275366"
     Region          920..953
                     /region_name="TSP_3"
                     /note="Thrombospondin type 3 repeat; pfam02412"
                     /db_xref="CDD:367074"
     Region          973..1170
                     /region_name="TSP_C"
                     /note="Thrombospondin C-terminal region; pfam05735"
                     /db_xref="CDD:461725"
     CDS             1..1171
                     /gene="THBS1"
                     /coded_by="XM_061157613.1:177..3692"
                     /db_xref="GeneID:133066481"
ORIGIN      
        1 mglawglavl llshvcgssr ipesggdnsv fdifeltgaa rkgsgrrlvk gpdpsspafr
       61 iedanlippv pdkkfqdlvd avraekgfll laslrqmkkt rgtllaverk dhsgqlfsvv
      121 sngkagtldl sltvqgkqhv vsveeallat gqwkgitlfv qddraqlyid cekmenaeld
      181 vpiqsiftrd lasiarlria kggvndnfqg vlqnvrfvfg ttpedilrnk gcssstsvfl
      241 tldnnvvngs spairtdyig hktkdlqaic giscdelssm vlelrglrti vttlqdsirk
      301 vteenkelan elrrpplcyh ngvqyrtgde wtvdsctecr cqnsvtickk vscpimpcsn
      361 atvpdgeccp rcwpasdsad dgwspwsewt scsvtcgngi qqrgrscdsl nnrcegssvq
      421 trtchiqecd krfkqdggws hwspwsscsv tcgdgvitri rlcnspspqm ngkpcegkar
      481 etkacqkdac pinggwgpws pwdicsvtcg ggvqkrsrlc nnptpqfggk dcigdvtenq
      541 icnkqdcpid gclsnpcfag vqctsypdgs wkcgacppgy sgdgvackdv deckevpdac
      601 fnhngehrce ntdpgynclp cpprftgsqp fgrgvehata nkqvckprnp ctdgthdcnk
      661 nakcnylghy sdpmyrceck pgyagngiic gedtdldgwp nedlvcvana tyhckkdncp
      721 nlpnsgqedy dkdgigdacd ddddndkipd drdncpfhyn paqydydrdd vgdrcdncpy
      781 nhnpdqadtd nngegdacaa didgdgilne rdncqyvynv dqkdtdmdgv gdqcdncple
      841 hnpdqldsds drigdtcdnn qdidedghqn nldncpyvpn anqadhdkdg kgdacdhddd
      901 ndgipddrdn crlvpnpdqk dsdgdgrgda ckddfdqdkv pdiddicpen vdisetdfrr
      961 fqmipldpkg tsqndpnwvv rhqgkelvqt vncdpglavg ydefnavdfs gtffinterd
     1021 ddyagfvfgy qsssrfyvvm wkqvtqsywd tnptraqgys glsvkvvnst tgpgehlrna
     1081 lwhtgntpgq vrtlwhdprh igwkdftayr wrlshrpktg firvvmyegk kimadsgpiy
     1141 dktyaggrlg lfvfsqemvf fsdlkyecrd s
//
LOCUS       XP_061013597            1170 aa            linear   MAM 02-DEC-2023
DEFINITION  thrombospondin-1 isoform X2 [Dama dama].
ACCESSION   XP_061013597
VERSION     XP_061013597.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157614.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1170
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1170
                     /product="thrombospondin-1 isoform X2"
                     /calculated_mol_wt=129133
     Region          26..221
                     /region_name="TSPN"
                     /note="Thrombospondin N-terminal -like domains;
                     smart00210"
                     /db_xref="CDD:214560"
     Region          318..372
                     /region_name="VWC"
                     /note="von Willebrand factor type C domain; pfam00093"
                     /db_xref="CDD:278520"
     Region          383..428
                     /region_name="TSP_1"
                     /note="Thrombospondin type 1 domain; pfam00090"
                     /db_xref="CDD:459668"
     Region          438..490
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          495..547
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          650..689
                     /region_name="EGF_3"
                     /note="EGF domain; pfam12947"
                     /db_xref="CDD:463759"
     Region          691..726
                     /region_name="TSP3 repeat_1C"
                     /note="TSP3 repeat_1C [structural motif]"
                     /db_xref="CDD:275367"
     Region          763..785
                     /region_name="TSP3 repeat_short"
                     /note="TSP3 repeat_short [structural motif]"
                     /db_xref="CDD:275365"
     Region          786..821
                     /region_name="TSP_3"
                     /note="Thrombospondin type 3 repeat; pfam02412"
                     /db_xref="CDD:367074"
     Region          787..821
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275366"
     Region          822..844
                     /region_name="TSP3 repeat_short"
                     /note="TSP3 repeat_short [structural motif]"
                     /db_xref="CDD:275366"
     Region          845..882
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275365"
     Region          846..882
                     /region_name="TSP_3"
                     /note="Thrombospondin type 3 repeat; pfam02412"
                     /db_xref="CDD:367074"
     Region          883..918
                     /region_name="TSP3 repeat_short"
                     /note="TSP3 repeat_short [structural motif]"
                     /db_xref="CDD:275366"
     Region          919..952
                     /region_name="TSP_3"
                     /note="Thrombospondin type 3 repeat; pfam02412"
                     /db_xref="CDD:367074"
     Region          972..1169
                     /region_name="TSP_C"
                     /note="Thrombospondin C-terminal region; pfam05735"
                     /db_xref="CDD:461725"
     CDS             1..1170
                     /gene="THBS1"
                     /coded_by="XM_061157614.1:177..3689"
                     /db_xref="GeneID:133066481"
ORIGIN      
        1 mglawglavl llshvcgssr ipesggdnsv fdifeltgaa rkgsgrrlvk gpdpsspafr
       61 iedanlippv pdkkfqdlvd avraekgfll laslrqmkkt rgtllaverk dhsgqlfsvv
      121 sngkagtldl sltvqgkqhv vsveeallat gqwkgitlfv qddraqlyid cekmenaeld
      181 vpiqsiftrd lasiarlria kggvndnfqg vlqnvrfvfg ttpedilrnk gcssstsvfl
      241 tldnnvvngs spairtdyig hktkdlqaic giscdelssm vlelrglrti vttlqdsirk
      301 vteenkelan elrrpplcyh ngvqyrtgde wtvdsctecr cqnsvtickk vscpimpcsn
      361 atvpdgeccp rcwpsdsadd gwspwsewts csvtcgngiq qrgrscdsln nrcegssvqt
      421 rtchiqecdk rfkqdggwsh wspwsscsvt cgdgvitrir lcnspspqmn gkpcegkare
      481 tkacqkdacp inggwgpwsp wdicsvtcgg gvqkrsrlcn nptpqfggkd cigdvtenqi
      541 cnkqdcpidg clsnpcfagv qctsypdgsw kcgacppgys gdgvackdvd eckevpdacf
      601 nhngehrcen tdpgynclpc pprftgsqpf grgvehatan kqvckprnpc tdgthdcnkn
      661 akcnylghys dpmyrceckp gyagngiicg edtdldgwpn edlvcvanat yhckkdncpn
      721 lpnsgqedyd kdgigdacdd dddndkipdd rdncpfhynp aqydydrddv gdrcdncpyn
      781 hnpdqadtdn ngegdacaad idgdgilner dncqyvynvd qkdtdmdgvg dqcdncpleh
      841 npdqldsdsd rigdtcdnnq didedghqnn ldncpyvpna nqadhdkdgk gdacdhdddn
      901 dgipddrdnc rlvpnpdqkd sdgdgrgdac kddfdqdkvp diddicpenv disetdfrrf
      961 qmipldpkgt sqndpnwvvr hqgkelvqtv ncdpglavgy defnavdfsg tffinterdd
     1021 dyagfvfgyq sssrfyvvmw kqvtqsywdt nptraqgysg lsvkvvnstt gpgehlrnal
     1081 whtgntpgqv rtlwhdprhi gwkdftayrw rlshrpktgf irvvmyegkk imadsgpiyd
     1141 ktyaggrlgl fvfsqemvff sdlkyecrds
//
LOCUS       XP_061013598             797 aa            linear   MAM 02-DEC-2023
DEFINITION  RAS guanyl-releasing protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061013598
VERSION     XP_061013598.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157615.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..797
                     /product="RAS guanyl-releasing protein 1 isoform X1"
                     /calculated_mol_wt=90298
     Region          54..175
                     /region_name="RasGEFN"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     GTPases; N-terminal motif; smart00229"
                     /db_xref="CDD:214571"
     Site            order(72,123..124,127,130..131,166..167,170,177)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:100121"
     Region          201..437
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases; smart00147"
                     /db_xref="CDD:214539"
     Site            order(234..236,244..245,247..249,251..252,255..256,259,
                     292,295..296,298..300,302..305,307..308,328,331,336..338,
                     341,354..356,359..361,363..365,367..370,385,389,424,
                     427..428)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     Region          <471..527
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     Region          540..594
                     /region_name="C1_RASGRP1"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in RAS guanyl-releasing protein 1 (RASGRP1) and
                     similar proteins; cd20860"
                     /db_xref="CDD:410410"
     Site            order(547..553,561..565,568)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410410"
     Region          739..793
                     /region_name="cc_RasGRP1_C"
                     /note="C-terminal coiled-coil domain of RAS
                     guanyl-releasing protein 1 (RasGRP1) and similar proteins;
                     cd22290"
                     /db_xref="CDD:412086"
     Site            order(745..748,751,754..755,758..759,761..762,765..766,
                     768..769,772,776,779..780,782)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:412086"
     CDS             1..797
                     /gene="RASGRP1"
                     /coded_by="XM_061157615.1:121..2514"
                     /db_xref="GeneID:133066482"
ORIGIN      
        1 mgtlgkarea prkpshgcra apkarleakp assplpahps laqitqlrmm vplghfakga
       61 slddlidscv qsfdadgnlc rsnqllqvml tmhrilissa ellqkvitly kdalaknspg
      121 lclkicyfvr ywitefwimf kmdtslastm eefqelvkan geelhrrlid ttqinardws
      181 rkltqriksn tskkrkvsll fdhlepeels ehltylefks frrisfsdyq nylvnscvke
      241 nptmersial cngisqwvql mvlsrptpql raevfikfiq vaqklhqlqn fntlmavigg
      301 lchssisrlk etsshvphei nkvlgemtel lsscrnydny rraygectdf kipilgvhlk
      361 dlislyeamp dyleegkvnv pkllalynhi nelvqlqeva ppleankdlv hlltlsldly
      421 ytedeiyels yareprnhka ppltpskppv vvdwasgvsp kpdpktiskh vqrmvdsvfk
      481 nydhdqdgyi sqeefekiaa sfpfsfcvmd kdreglisrd eitayfmras siysklglgf
      541 phnfqettyl kptfcdncag flwgvikqgy rckdcgmnch kqckdlvvfe ckkqaknsta
      601 pteistsvgp asnlcslgak dllhapeegp ftflngeave hsedskdrti mlmgvssqki
      661 svrlkrtfah katqtealsw lgsegpsshf vlssprktaq dtlyvlpspt spcpspvlvr
      721 krafvkwenk esfikskeel rhlrlptyqe leqeintlka dnnalktqlk yaqkkietlq
      781 larnnhvlaq meqgdcs
//
LOCUS       XP_061013599             659 aa            linear   MAM 02-DEC-2023
DEFINITION  RAS guanyl-releasing protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061013599
VERSION     XP_061013599.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157616.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..659
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..659
                     /product="RAS guanyl-releasing protein 1 isoform X2"
                     /calculated_mol_wt=75052
     Region          63..299
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases; smart00147"
                     /db_xref="CDD:214539"
     Site            order(96..98,106..107,109..111,113..114,117..118,121,154,
                     157..158,160..162,164..167,169..170,190,193,198..200,203,
                     216..218,221..223,225..227,229..232,247,251,286,289..290)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     Region          <333..389
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     Region          402..456
                     /region_name="C1_RASGRP1"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in RAS guanyl-releasing protein 1 (RASGRP1) and
                     similar proteins; cd20860"
                     /db_xref="CDD:410410"
     Site            order(409..415,423..427,430)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410410"
     Region          601..655
                     /region_name="cc_RasGRP1_C"
                     /note="C-terminal coiled-coil domain of RAS
                     guanyl-releasing protein 1 (RasGRP1) and similar proteins;
                     cd22290"
                     /db_xref="CDD:412086"
     Site            order(607..610,613,616..617,620..621,623..624,627..628,
                     630..631,634,638,641..642,644)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:412086"
     CDS             1..659
                     /gene="RASGRP1"
                     /coded_by="XM_061157616.1:949..2928"
                     /db_xref="GeneID:133066482"
ORIGIN      
        1 mfkmdtslas tmeefqelvk angeelhrrl idttqinard wsrkltqrik sntskkrkvs
       61 llfdhlepee lsehltylef ksfrrisfsd yqnylvnscv kenptmersi alcngisqwv
      121 qlmvlsrptp qlraevfikf iqvaqklhql qnfntlmavi gglchssisr lketsshvph
      181 einkvlgemt ellsscrnyd nyrraygect dfkipilgvh lkdlislyea mpdyleegkv
      241 nvpkllalyn hinelvqlqe vappleankd lvhlltlsld lyytedeiye lsyareprnh
      301 kappltpskp pvvvdwasgv spkpdpktis khvqrmvdsv fknydhdqdg yisqeefeki
      361 aasfpfsfcv mdkdreglis rdeitayfmr assiysklgl gfphnfqett ylkptfcdnc
      421 agflwgvikq gyrckdcgmn chkqckdlvv feckkqakns tapteistsv gpasnlcslg
      481 akdllhapee gpftflngea vehsedskdr timlmgvssq kisvrlkrtf ahkatqteal
      541 swlgsegpss hfvlssprkt aqdtlyvlps ptspcpspvl vrkrafvkwe nkesfikske
      601 elrhlrlpty qeleqeintl kadnnalktq lkyaqkkiet lqlarnnhvl aqmeqgdcs
//
LOCUS       XP_061013600             659 aa            linear   MAM 02-DEC-2023
DEFINITION  RAS guanyl-releasing protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061013600
VERSION     XP_061013600.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157617.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..659
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..659
                     /product="RAS guanyl-releasing protein 1 isoform X2"
                     /calculated_mol_wt=75052
     Region          63..299
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases; smart00147"
                     /db_xref="CDD:214539"
     Site            order(96..98,106..107,109..111,113..114,117..118,121,154,
                     157..158,160..162,164..167,169..170,190,193,198..200,203,
                     216..218,221..223,225..227,229..232,247,251,286,289..290)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     Region          <333..389
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     Region          402..456
                     /region_name="C1_RASGRP1"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in RAS guanyl-releasing protein 1 (RASGRP1) and
                     similar proteins; cd20860"
                     /db_xref="CDD:410410"
     Site            order(409..415,423..427,430)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410410"
     Region          601..655
                     /region_name="cc_RasGRP1_C"
                     /note="C-terminal coiled-coil domain of RAS
                     guanyl-releasing protein 1 (RasGRP1) and similar proteins;
                     cd22290"
                     /db_xref="CDD:412086"
     Site            order(607..610,613,616..617,620..621,623..624,627..628,
                     630..631,634,638,641..642,644)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:412086"
     CDS             1..659
                     /gene="RASGRP1"
                     /coded_by="XM_061157617.1:943..2922"
                     /db_xref="GeneID:133066482"
ORIGIN      
        1 mfkmdtslas tmeefqelvk angeelhrrl idttqinard wsrkltqrik sntskkrkvs
       61 llfdhlepee lsehltylef ksfrrisfsd yqnylvnscv kenptmersi alcngisqwv
      121 qlmvlsrptp qlraevfikf iqvaqklhql qnfntlmavi gglchssisr lketsshvph
      181 einkvlgemt ellsscrnyd nyrraygect dfkipilgvh lkdlislyea mpdyleegkv
      241 nvpkllalyn hinelvqlqe vappleankd lvhlltlsld lyytedeiye lsyareprnh
      301 kappltpskp pvvvdwasgv spkpdpktis khvqrmvdsv fknydhdqdg yisqeefeki
      361 aasfpfsfcv mdkdreglis rdeitayfmr assiysklgl gfphnfqett ylkptfcdnc
      421 agflwgvikq gyrckdcgmn chkqckdlvv feckkqakns tapteistsv gpasnlcslg
      481 akdllhapee gpftflngea vehsedskdr timlmgvssq kisvrlkrtf ahkatqteal
      541 swlgsegpss hfvlssprkt aqdtlyvlps ptspcpspvl vrkrafvkwe nkesfikske
      601 elrhlrlpty qeleqeintl kadnnalktq lkyaqkkiet lqlarnnhvl aqmeqgdcs
//
LOCUS       XP_061013601             417 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM98B [Dama dama].
ACCESSION   XP_061013601
VERSION     XP_061013601.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157618.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..417
                     /product="protein FAM98B"
                     /calculated_mol_wt=44533
     Region          34..330
                     /region_name="DUF2465"
                     /note="Protein of unknown function (DUF2465); pfam10239"
                     /db_xref="CDD:463016"
     CDS             1..417
                     /gene="FAM98B"
                     /coded_by="XM_061157618.1:39..1292"
                     /db_xref="GeneID:133066484"
ORIGIN      
        1 mrgpdpgpep tmegdvldtl ealgykgpll eeqaltkaae sglsspefse lcvwlssqik
       61 slcnleesit sagrddlesf qleisgflke macpysvlis gdikdrlkkk ddclklllfl
      121 stelqalqil qnkkcknsql dknseiyqev qaicdtlgip ksttsdiplm lsqveskvkd
      181 tlskvqknhv gkpllkidls leqaekleri ndalsceyec rrrmlmkrld vtvqsfgwsd
      241 raklktddia riyqpkryal spkttitlah llaaredlsk iirtssgssr ektacainkv
      301 lmgrvpdrgg rpneiepppp emppwqkrqe gggrggwggg gggrggagsg rgggwggggg
      361 wggagggggr gggfqgrgdy ggrgdhggrg gyggrggygg rgygdpyggg gggyrry
//
LOCUS       XP_061013603             443 aa            linear   MAM 02-DEC-2023
DEFINITION  sprouty-related, EVH1 domain-containing protein 1 [Dama dama].
ACCESSION   XP_061013603
VERSION     XP_061013603.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157620.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..443
                     /product="sprouty-related, EVH1 domain-containing protein
                     1"
                     /calculated_mol_wt=50191
     Region          13..125
                     /region_name="EVH1_SPRED-like"
                     /note="Sprouty-related EVH1 domain-containing-like
                     proteins EVH1 domain; cd10574"
                     /db_xref="CDD:269978"
     Site            order(22,31,89,91)
                     /site_type="other"
                     /note="putative proline-rich peptide binding site
                     [polypeptide binding]"
                     /db_xref="CDD:269978"
     Region          331..427
                     /region_name="Sprouty"
                     /note="Sprouty protein (Spry); pfam05210"
                     /db_xref="CDD:461589"
     CDS             1..443
                     /gene="SPRED1"
                     /coded_by="XM_061157620.1:357..1688"
                     /db_xref="GeneID:133066486"
ORIGIN      
        1 mseetatsdn dnsyarvrav vmtrddssgg wlplggsgls cvtvfkvphq eengcadffi
       61 rgerlrdkmv vlecmlkkdl iynkvtptfh hwkiddkkfg ltfqspadar afdrgirrai
      121 edisqgcpsf kneaegtedn lqaaeedtss slvkdhlfhq dtvvtsepyr ssrpspfegl
      181 narsvylrsq anqimfshpg ldiqdrsiey gqrqmpkecg glksqnkvpl ksirhvsfqd
      241 edeivrinpr dilirryady rhpdmwkndl erddtdssvq fskpdskksd ylyscgdetk
      301 lsslkdsvvf ktqpsslkfk kskrrkedge rsrcvycqer fnheengrgk cqdapdpikr
      361 ciyqvscmlc aesmlyhcms dsegdfsdpc scdtsddkfc lrwlalvals fivpcmccyv
      421 plrmchrcge acgccggkhk aag
//
LOCUS       XP_061013604             477 aa            linear   MAM 02-DEC-2023
DEFINITION  homeobox protein Meis2 isoform X1 [Dama dama].
ACCESSION   XP_061013604
VERSION     XP_061013604.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157621.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..477
                     /product="homeobox protein Meis2 isoform X1"
                     /calculated_mol_wt=51657
     Region          110..194
                     /region_name="Meis_PKNOX_N"
                     /note="N-terminal of Homeobox Meis and PKNOX1; pfam16493"
                     /db_xref="CDD:465140"
     Site            order(282,325,328..329,332)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     Region          295..333
                     /region_name="Homeobox_KN"
                     /note="Homeobox KN domain; pfam05920"
                     /db_xref="CDD:428673"
     Region          <335..>463
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     CDS             1..477
                     /gene="MEIS2"
                     /coded_by="XM_061157621.1:233..1666"
                     /db_xref="GeneID:133066487"
ORIGIN      
        1 maqrydelph yggmdgvgvp asmygdphap rpippvhhln hgpplhatqh ygahaphpnv
       61 mpasmgsavn dalkrdkdai yghplfplla lvfekcelat ctprepgvag gdvcssdsfn
      121 ediavfakqv raekplfssn peldnlmiqa iqvlrfhlle lekvhelcdn fchryisclk
      181 gkmpidlvid erdgssksdh eelsgsstnl adhnpaswrd hddatsthsa gtpgpssggh
      241 asqsgdnsse qgdgldnsva spgtgddddp dkdkkrqkkr gifpkvatni mrawlfqhlt
      301 hpypseeqkk qlaqdtglti lqvnnwfina rrrivqpmid qsnragflld psvsqgaays
      361 pegqpmgsfv ldgqqhmgir paglqsmpge yvsqggpmgm smaqpsytpp qmtphptqlr
      421 hgppmhsylp shphhpammm hggppthpgm tmsaqsptml nsvdpnvggq vmdihaq
//
LOCUS       XP_061013605             476 aa            linear   MAM 02-DEC-2023
DEFINITION  homeobox protein Meis2 isoform X2 [Dama dama].
ACCESSION   XP_061013605
VERSION     XP_061013605.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157622.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..476
                     /product="homeobox protein Meis2 isoform X2"
                     /calculated_mol_wt=51562
     Region          109..193
                     /region_name="Meis_PKNOX_N"
                     /note="N-terminal of Homeobox Meis and PKNOX1; pfam16493"
                     /db_xref="CDD:465140"
     Site            order(281,324,327..328,331)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     Region          294..332
                     /region_name="Homeobox_KN"
                     /note="Homeobox KN domain; pfam05920"
                     /db_xref="CDD:428673"
     Region          <334..>462
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     CDS             1..476
                     /gene="MEIS2"
                     /coded_by="XM_061157622.1:95..1525"
                     /db_xref="GeneID:133066487"
ORIGIN      
        1 mflydelphy ggmdgvgvpa smygdphapr pippvhhlnh gpplhatqhy gahaphpnvm
       61 pasmgsavnd alkrdkdaiy ghplfpllal vfekcelatc tprepgvagg dvcssdsfne
      121 diavfakqvr aekplfssnp eldnlmiqai qvlrfhllel ekvhelcdnf chryisclkg
      181 kmpidlvide rdgssksdhe elsgsstnla dhnpaswrdh ddatsthsag tpgpssggha
      241 sqsgdnsseq gdgldnsvas pgtgddddpd kdkkrqkkrg ifpkvatnim rawlfqhlth
      301 pypseeqkkq laqdtgltil qvnnwfinar rrivqpmidq snragflldp svsqgaaysp
      361 egqpmgsfvl dgqqhmgirp aglqsmpgey vsqggpmgms maqpsytppq mtphptqlrh
      421 gppmhsylps hphhpammmh ggppthpgmt msaqsptmln svdpnvggqv mdihaq
//
LOCUS       XP_061013606             401 aa            linear   MAM 02-DEC-2023
DEFINITION  homeobox protein Meis2 isoform X3 [Dama dama].
ACCESSION   XP_061013606
VERSION     XP_061013606.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157623.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..401
                     /product="homeobox protein Meis2 isoform X3"
                     /calculated_mol_wt=43644
     Region          110..194
                     /region_name="Meis_PKNOX_N"
                     /note="N-terminal of Homeobox Meis and PKNOX1; pfam16493"
                     /db_xref="CDD:465140"
     Site            order(282,325,328..329,332)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     Region          295..333
                     /region_name="Homeobox_KN"
                     /note="Homeobox KN domain; pfam05920"
                     /db_xref="CDD:428673"
     CDS             1..401
                     /gene="MEIS2"
                     /coded_by="XM_061157623.1:247..1452"
                     /db_xref="GeneID:133066487"
ORIGIN      
        1 maqrydelph yggmdgvgvp asmygdphap rpippvhhln hgpplhatqh ygahaphpnv
       61 mpasmgsavn dalkrdkdai yghplfplla lvfekcelat ctprepgvag gdvcssdsfn
      121 ediavfakqv raekplfssn peldnlmiqa iqvlrfhlle lekvhelcdn fchryisclk
      181 gkmpidlvid erdgssksdh eelsgsstnl adhnpaswrd hddatsthsa gtpgpssggh
      241 asqsgdnsse qgdgldnsva spgtgddddp dkdkkrqkkr gifpkvatni mrawlfqhlt
      301 hpypseeqkk qlaqdtglti lqvnnwfina rrrivqpmid qsnragflld psvsqgaays
      361 pegqpmgsfv ldgqqhmgir pagpmsgmgm nmgmdgqwhy m
//
LOCUS       XP_061013607             400 aa            linear   MAM 02-DEC-2023
DEFINITION  homeobox protein Meis2 isoform X4 [Dama dama].
ACCESSION   XP_061013607
VERSION     XP_061013607.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157624.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..400
                     /product="homeobox protein Meis2 isoform X4"
                     /calculated_mol_wt=43549
     Region          109..193
                     /region_name="Meis_PKNOX_N"
                     /note="N-terminal of Homeobox Meis and PKNOX1; pfam16493"
                     /db_xref="CDD:465140"
     Site            order(281,324,327..328,331)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     Region          294..332
                     /region_name="Homeobox_KN"
                     /note="Homeobox KN domain; pfam05920"
                     /db_xref="CDD:428673"
     CDS             1..400
                     /gene="MEIS2"
                     /coded_by="XM_061157624.1:95..1297"
                     /db_xref="GeneID:133066487"
ORIGIN      
        1 mflydelphy ggmdgvgvpa smygdphapr pippvhhlnh gpplhatqhy gahaphpnvm
       61 pasmgsavnd alkrdkdaiy ghplfpllal vfekcelatc tprepgvagg dvcssdsfne
      121 diavfakqvr aekplfssnp eldnlmiqai qvlrfhllel ekvhelcdnf chryisclkg
      181 kmpidlvide rdgssksdhe elsgsstnla dhnpaswrdh ddatsthsag tpgpssggha
      241 sqsgdnsseq gdgldnsvas pgtgddddpd kdkkrqkkrg ifpkvatnim rawlfqhlth
      301 pypseeqkkq laqdtgltil qvnnwfinar rrivqpmidq snragflldp svsqgaaysp
      361 egqpmgsfvl dgqqhmgirp agpmsgmgmn mgmdgqwhym
//
LOCUS       XP_061013608             389 aa            linear   MAM 02-DEC-2023
DEFINITION  homeobox protein Meis2 isoform X5 [Dama dama].
ACCESSION   XP_061013608
VERSION     XP_061013608.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157625.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..389
                     /product="homeobox protein Meis2 isoform X5"
                     /calculated_mol_wt=42194
     Region          22..106
                     /region_name="Meis_PKNOX_N"
                     /note="N-terminal of Homeobox Meis and PKNOX1; pfam16493"
                     /db_xref="CDD:465140"
     Site            order(194,237,240..241,244)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     Region          207..245
                     /region_name="Homeobox_KN"
                     /note="Homeobox KN domain; pfam05920"
                     /db_xref="CDD:428673"
     Region          <247..>375
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     CDS             1..389
                     /gene="MEIS2"
                     /coded_by="XM_061157625.1:106..1275"
                     /db_xref="GeneID:133066487"
ORIGIN      
        1 malvfekcel atctprepgv aggdvcssds fnediavfak qvraekplfs snpeldnlmi
       61 qaiqvlrfhl lelekvhelc dnfchryisc lkgkmpidlv iderdgssks dheelsgsst
      121 nladhnpasw rdhddatsth sagtpgpssg ghasqsgdns seqgdgldns vaspgtgddd
      181 dpdkdkkrqk krgifpkvat nimrawlfqh lthpypseeq kkqlaqdtgl tilqvnnwfi
      241 narrrivqpm idqsnragfl ldpsvsqgaa yspegqpmgs fvldgqqhmg irpaglqsmp
      301 geyvsqggpm gmsmaqpsyt ppqmtphptq lrhgppmhsy lpshphhpam mmhggppthp
      361 gmtmsaqspt mlnsvdpnvg gqvmdihaq
//
LOCUS       XP_061013609             281 aa            linear   MAM 02-DEC-2023
DEFINITION  CDAN1-interacting nuclease 1 [Dama dama].
ACCESSION   XP_061013609
VERSION     XP_061013609.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157626.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..281
                     /product="CDAN1-interacting nuclease 1"
                     /calculated_mol_wt=32100
     Region          132..269
                     /region_name="TPD"
                     /note="Protein of unknown function TPD sequence-motif;
                     pfam14811"
                     /db_xref="CDD:464328"
     CDS             1..281
                     /gene="CDIN1"
                     /coded_by="XM_061157626.1:207..1052"
                     /db_xref="GeneID:133066488"
ORIGIN      
        1 miltkaqyde iaqclvsvpp trqslrklkq rfpsqsqatl lsifsqeyqk hikrthakhh
       61 tseaiesyyq rylngvgeng aapvllelan eveyapslma riilerflqe heeappsksv
      121 insmlrdpsq ipdgvlanqv yqcivndccy gplvdcikha ighehevllr dllleknlsf
      181 ldedqlrarg ydktpdfilq vpvaveghii hwieskasfg decshhaylh dqfwsywnrf
      241 gpglviywyg fiqeldcnre rgillhacfp tdivtlchsv a
//
LOCUS       XP_061013610             267 aa            linear   MAM 02-DEC-2023
DEFINITION  diphthine--ammonia ligase isoform X1 [Dama dama].
ACCESSION   XP_061013610
VERSION     XP_061013610.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157627.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..267
                     /product="diphthine--ammonia ligase isoform X1"
                     /calculated_mol_wt=29843
     Region          2..219
                     /region_name="AANH_PF0828-like"
                     /note="putative ATP pyrophosphatase PF0828 and similar
                     proteins; cd01994"
                     /db_xref="CDD:467498"
     CDS             1..267
                     /gene="DPH6"
                     /coded_by="XM_061157627.1:127..930"
                     /db_xref="GeneID:133066489"
ORIGIN      
        1 mrvaalisgg kdscynmmqc vaaghqival anlrpaenqv gsdeldsymy qtvghhaidl
       61 yaeamalply rrtirgksmd tgpvytkceg devedlyell klvkekeeve gisvgailsd
      121 yqrvrvenvc krlnlqplty lwqrnqedll qemissniqa iiikvaalgl dpdkhlgktl
      181 dqmepyllel skkygvhvcg eggeyetftl dcplfkkkii vdssevvths adafapvayl
      241 rflelhledk vspvpdncrt snyihns
//
LOCUS       XP_061013611             230 aa            linear   MAM 02-DEC-2023
DEFINITION  diphthine--ammonia ligase isoform X2 [Dama dama].
ACCESSION   XP_061013611
VERSION     XP_061013611.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157628.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..230
                     /product="diphthine--ammonia ligase isoform X2"
                     /calculated_mol_wt=25755
     Region          2..>184
                     /region_name="AANH_PF0828-like"
                     /note="putative ATP pyrophosphatase PF0828 and similar
                     proteins; cd01994"
                     /db_xref="CDD:467498"
     CDS             1..230
                     /gene="DPH6"
                     /coded_by="XM_061157628.1:127..819"
                     /db_xref="GeneID:133066489"
ORIGIN      
        1 mrvaalisgg kdscynmmqc vaaghqival anlrpaenqv gsdeldsymy qtvghhaidl
       61 yaeamalply rrtirgksmd tgpvytkceg devedlyell klvkekeeve gisvgailsd
      121 yqrvrvenvc krlnlqplty lwqrnqedll qemissniqa iiikvaalgd dcsheikrcl
      181 llgrkgmtnl dsilksrdit lltkvhlvka mvfpvvingw eswtikkart
//
LOCUS       XP_061013612             692 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 770 [Dama dama].
ACCESSION   XP_061013612
VERSION     XP_061013612.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157629.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..692
                     /product="zinc finger protein 770"
                     /calculated_mol_wt=79760
     Region          29..49
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(34,36,38,40..41,44..45,48,62,64,68..69,72..73,76,88,
                     90,92,94..95,98..99,102)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          42..66
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          57..77
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(57,60,73,77)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          83..103
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          163..183
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(168,170,172,174..175,178..179,182,196,198,202..203,
                     206..207,210,224,226,228,230..231,234..235,238)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          191..211
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(191,194,207,211)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          219..239
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          483..503
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(483,486,499,503)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          511..531
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          641..661
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(641,644,657,661)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          669..689
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..692
                     /gene="ZNF770"
                     /coded_by="XM_061157629.1:167..2245"
                     /db_xref="GeneID:133066491"
ORIGIN      
        1 mmaennfkml kiqqcvaank lprnrpyicn icfkhfetps klarhyliht gqkpfecdvc
       61 hktfrqlvhl erhqlthnlp fkcsicqrhf knlktfvkhq qlhdetyqnd vkqvrrllea
      121 kqekpvygmy htftpeerwa lhpcsksdpt yspskkkkdi hacticgkmf psqskldrha
      181 lihtgqrpfk cvlcsksfrq sthlkihqlt hseerpfqcc fcqkgfkiqs kllkhkqiht
      241 rnktfqtlsl kvkssescsl pnklnakqdg fengdigkse ennqldvhsv yivpfqcpec
      301 eecfeseqil nghkcfpars gkipsklkrs cnyktivkki laklkraggk kldnfrsdkk
      361 vfkntfmknc dlisgeqrpe qtqrtclssl gkhgtyktvg nkkktltlpf swpkhcqsqh
      421 mgknvkgilt penmltmdnp mhkkdisiyg ssgeeffenc qmlrcgfsvp sgnihtghkm
      481 cpcdkcekvf psvsklqrhy lihtgqrpfg cnvcgksfrq sahlkrhklt hidklpcrks
      541 lcqveledfn klfihqgdnv sysasqqcqt lgfqkykvse sdqisetkvk aesedfipga
      601 pcgnrepcls sillgseqsh hshycrysgr aersdgllyq csvcsksfrs psklerhyli
      661 hagqkpfecs vcgktfrqap hwkrhqlthf ke
//
LOCUS       XP_061013613             692 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 770 [Dama dama].
ACCESSION   XP_061013613
VERSION     XP_061013613.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157630.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..692
                     /product="zinc finger protein 770"
                     /calculated_mol_wt=79760
     Region          29..49
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(34,36,38,40..41,44..45,48,62,64,68..69,72..73,76,88,
                     90,92,94..95,98..99,102)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          42..66
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          57..77
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(57,60,73,77)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          83..103
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          163..183
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(168,170,172,174..175,178..179,182,196,198,202..203,
                     206..207,210,224,226,228,230..231,234..235,238)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          191..211
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(191,194,207,211)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          219..239
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          483..503
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(483,486,499,503)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          511..531
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          641..661
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(641,644,657,661)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          669..689
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..692
                     /gene="ZNF770"
                     /coded_by="XM_061157630.1:166..2244"
                     /db_xref="GeneID:133066491"
ORIGIN      
        1 mmaennfkml kiqqcvaank lprnrpyicn icfkhfetps klarhyliht gqkpfecdvc
       61 hktfrqlvhl erhqlthnlp fkcsicqrhf knlktfvkhq qlhdetyqnd vkqvrrllea
      121 kqekpvygmy htftpeerwa lhpcsksdpt yspskkkkdi hacticgkmf psqskldrha
      181 lihtgqrpfk cvlcsksfrq sthlkihqlt hseerpfqcc fcqkgfkiqs kllkhkqiht
      241 rnktfqtlsl kvkssescsl pnklnakqdg fengdigkse ennqldvhsv yivpfqcpec
      301 eecfeseqil nghkcfpars gkipsklkrs cnyktivkki laklkraggk kldnfrsdkk
      361 vfkntfmknc dlisgeqrpe qtqrtclssl gkhgtyktvg nkkktltlpf swpkhcqsqh
      421 mgknvkgilt penmltmdnp mhkkdisiyg ssgeeffenc qmlrcgfsvp sgnihtghkm
      481 cpcdkcekvf psvsklqrhy lihtgqrpfg cnvcgksfrq sahlkrhklt hidklpcrks
      541 lcqveledfn klfihqgdnv sysasqqcqt lgfqkykvse sdqisetkvk aesedfipga
      601 pcgnrepcls sillgseqsh hshycrysgr aersdgllyq csvcsksfrs psklerhyli
      661 hagqkpfecs vcgktfrqap hwkrhqlthf ke
//
LOCUS       XP_061013614             692 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 770 [Dama dama].
ACCESSION   XP_061013614
VERSION     XP_061013614.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157631.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..692
                     /product="zinc finger protein 770"
                     /calculated_mol_wt=79760
     Region          29..49
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(34,36,38,40..41,44..45,48,62,64,68..69,72..73,76,88,
                     90,92,94..95,98..99,102)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          42..66
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          57..77
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(57,60,73,77)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          83..103
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          163..183
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(168,170,172,174..175,178..179,182,196,198,202..203,
                     206..207,210,224,226,228,230..231,234..235,238)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          191..211
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(191,194,207,211)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          219..239
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          483..503
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(483,486,499,503)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          511..531
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          641..661
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(641,644,657,661)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          669..689
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..692
                     /gene="ZNF770"
                     /coded_by="XM_061157631.1:190..2268"
                     /db_xref="GeneID:133066491"
ORIGIN      
        1 mmaennfkml kiqqcvaank lprnrpyicn icfkhfetps klarhyliht gqkpfecdvc
       61 hktfrqlvhl erhqlthnlp fkcsicqrhf knlktfvkhq qlhdetyqnd vkqvrrllea
      121 kqekpvygmy htftpeerwa lhpcsksdpt yspskkkkdi hacticgkmf psqskldrha
      181 lihtgqrpfk cvlcsksfrq sthlkihqlt hseerpfqcc fcqkgfkiqs kllkhkqiht
      241 rnktfqtlsl kvkssescsl pnklnakqdg fengdigkse ennqldvhsv yivpfqcpec
      301 eecfeseqil nghkcfpars gkipsklkrs cnyktivkki laklkraggk kldnfrsdkk
      361 vfkntfmknc dlisgeqrpe qtqrtclssl gkhgtyktvg nkkktltlpf swpkhcqsqh
      421 mgknvkgilt penmltmdnp mhkkdisiyg ssgeeffenc qmlrcgfsvp sgnihtghkm
      481 cpcdkcekvf psvsklqrhy lihtgqrpfg cnvcgksfrq sahlkrhklt hidklpcrks
      541 lcqveledfn klfihqgdnv sysasqqcqt lgfqkykvse sdqisetkvk aesedfipga
      601 pcgnrepcls sillgseqsh hshycrysgr aersdgllyq csvcsksfrs psklerhyli
      661 hagqkpfecs vcgktfrqap hwkrhqlthf ke
//
LOCUS       XP_061013615            1484 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA helicase aquarius [Dama dama].
ACCESSION   XP_061013615
VERSION     XP_061013615.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157632.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1484
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1484
                     /product="RNA helicase aquarius"
                     /calculated_mol_wt=170848
     Region          18..802
                     /region_name="Aquarius_N"
                     /note="Intron-binding protein aquarius N-terminus;
                     pfam16399"
                     /db_xref="CDD:435319"
     Region          797..1152
                     /region_name="EEXXQc_AQR"
                     /note="EEXXQ-box helicase domain of AQR; cd17935"
                     /db_xref="CDD:350693"
     Site            order(800..803,806,825..831,861,1137..1138)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350693"
     Region          1140..1323
                     /region_name="SF1_C_Upf1"
                     /note="C-terminal helicase domain of Upf1-like family
                     helicases; cd18808"
                     /db_xref="CDD:350195"
     Site            order(1229..1231,1259,1261..1262,1277)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350195"
     Site            order(1265,1267,1296)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350195"
     CDS             1..1484
                     /gene="AQR"
                     /coded_by="XM_061157632.1:209..4663"
                     /db_xref="GeneID:133066492"
ORIGIN      
        1 mtapaqpkki vaptvsqina efvtqlacky waphikkksp fdikviediy ekeivksrfa
       61 irkimllefs qylenylwmn yspevsskay lmsiccmvne kfrenvpawe tfkkkpdhfp
      121 fffkcilkaa laetdgefsl heqtvlllfl dhcfnslevd lirsqvqqli slpmwmglqp
      181 arlelelkkt pklrkfwnli kkndekmdpe areqayqerr flsqliqkfi svlksvplsd
      241 pvtmdkvhyc erfielmidl eallptrrwf ntilddshll vhcylsnlvr reedghlfsq
      301 lldmlkfytg feindqtgna ltenemttih ydritslqra afahfpelyd falsnvaevd
      361 treslvkffg plssntlhqv asylcllptl pkaedttfdk gfllellvsr herrisqiqq
      421 lnqmplypte kiiwdenivp teyysgegcl alpklnlqfl tlhdyllrnf nlfrlestye
      481 irqdiedsvs rmkpwqseyg gvvfggwarm aqpivaftvv evakpnigen wptrvradvt
      541 inlnvrdhik deweglrkhd vcflitvrpt kpygtkfdrr rpfieqvglv yvrgceiqgm
      601 lddkgrvied gpeprpslrg esrtfrvfld pnqyqqdmtn tiqngaedvy etfnvimrrk
      661 pkennfkavl etirnlmntd cvvpdwlhdi ilgygdpssa hyskmpnqia tldfndtfls
      721 iehlktsfpg hnvkvtvddp alqippfrit fpvrsgkgkk rkdvdgeded teeaktlive
      781 phvipnrgpy pynqpkrnti qfthtqieai ragmqpgltm vvgppgtgkt dvavqiisni
      841 yhnfpeqrtl ivthsnqaln qlfekimald iderhllrlg hgeeeletek dfsrygrvny
      901 vlarrielle evkrlqkslg vpgdasytce tagyfflyqv msrweeyisk vknksntmpd
      961 itevstffpf heyfanapqp ifkgrsyeed meiaegcfrh ikkiftqlee frasellrsg
     1021 ldrskyllvk eakiiamtct haalkrhdlv klgfkydnil meeaaqilei etfiplllqn
     1081 pqdgfsrlkr wimigdhhql ppviknmafq kysnmeqslf trfvrvgvpt vdldaqgrar
     1141 aslcnlynwr yknlgnlphv qllpefstan agllydfqli nvedfqgvge sepnpyfyqn
     1201 lgeaeyvval fmymcllgyp adkisiltty ngqkhlirdi inrrcgsnpl igrpnkvttv
     1261 drfqgqqndy illslvrtra vghlrdvrrl vvamsrarlg lyifarvslf qncfeltpaf
     1321 sqltarplhl hiiptepfpt srkngerpsh evqiiknmpq manfvynmym hliqtthhyh
     1381 qtllqlppam veeseevqsq eteleteeea mpaqadtvpd ettdasssqe tsasetettp
     1441 nqtgassspe atpadseitg tgpvtvpven ntthdvtstp getk
//
LOCUS       XP_061013616            1028 aa            linear   MAM 02-DEC-2023
DEFINITION  rho GTPase-activating protein 11A isoform X1 [Dama dama].
ACCESSION   XP_061013616
VERSION     XP_061013616.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157633.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1028
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1028
                     /product="rho GTPase-activating protein 11A isoform X1"
                     /calculated_mol_wt=113855
     Region          49..249
                     /region_name="RhoGAP-ARHGAP11A"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain of ArhGAP11A-like proteins. The
                     mouse homolog of human ArhGAP11A has been detected as a
                     gene exclusively expressed in immature ganglion cells,
                     potentially playing a role in retinal...; cd04394"
                     /db_xref="CDD:239859"
     Site            order(90,125,129,197,200..201,228)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239859"
     Site            90
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239859"
     CDS             1..1028
                     /gene="LOC133066493"
                     /coded_by="XM_061157633.1:599..3685"
                     /db_xref="GeneID:133066493"
ORIGIN      
        1 msgmwdqrlv rlavvqqlra aygikvkggr aqsdrrrpet atteivgkif gvplnalpqs
       61 vvpeyghips flvdactsle ehvhteglfr ksgsvirlka lknkldhger clssappcdt
      121 agllkqffre lpepilpadl healfkaqql kteeknkatl llsclmadht idilryffkf
      181 lrkvslrsse nkmdssnlav ifapnllqts eghekmsant ekklrlqaav vqtfidyasd
      241 ighvpdfile ripamlgidg lcattslegf eegdyetpgd ckrkrrqsvg dfvsgalnkf
      301 ksnrtpsitp qqeriaqlsv sptiltpnak rklpvdshgf sskkrksikh nfnfellpsn
      361 lfnssstpvs vhcdtspegs sqssfspvai sgnhlistnv lrrskrlask kvcslsrves
      421 gkagcfspki srkdkvrrsl rlkfnlgrns kdgnecsgvk rsenvgrrla nqqslktrie
      481 svktgllfsp dtderltkkg skkiskseen litperlsgt nyrmswigpt nsdfqevdgn
      541 easpidgtle vedsslepdm mvekspigsy eltppnvhst hnnnitggsl sgdennltte
      601 tvvkiqkafs esgsnlhali nhkqspltnv ekvkfnetss tkgspeknll ktnltviesn
      661 ghrtsndens fsesdfslhq pqksdreati kcystqmkiq lennihlnip kdylskqelp
      721 sdehvrkqes pgdtlntklk dnqnlieenl lkhtasrevv astssseqst cssadlpeps
      781 pvgiikqrsl vetrdetvse clqmtehgrv sdhiqwfnrl slnepnrtkv ksplkfqrtp
      841 vrqsvrrins lleyggpppr hklaslgdta splvksvsce salpsciesm tmtkdsslpc
      901 trsgpkeqks tsckqsnidm iskssmevts tsflqmkrhp nsvnaslgst rvckqevisn
      961 nqikfplddl tnhdivksiv sndkvippsv snrvlrkpse keriwykgsp knpigkvqll
     1021 ptskpvdl
//
LOCUS       XP_061013617             238 aa            linear   MAM 02-DEC-2023
DEFINITION  neuroendocrine protein 7B2 isoform X2 [Dama dama].
ACCESSION   XP_061013617
VERSION     XP_061013617.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157634.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..238
                     /product="neuroendocrine protein 7B2 isoform X2"
                     /calculated_mol_wt=26570
     Region          25..225
                     /region_name="Secretogranin_V"
                     /note="Neuroendocrine protein 7B2 precursor (Secretogranin
                     V); pfam05281"
                     /db_xref="CDD:368368"
     CDS             1..238
                     /gene="LOC133066493"
                     /coded_by="XM_061157634.1:103..819"
                     /db_xref="GeneID:133066493"
ORIGIN      
        1 mvsrmvstml sglvlwlmfg wtptaayspr tpdrvsetdi qrllhgvmeq lgiarprvey
       61 pahqamnlvg pqsieggahe glqhlgpfgn ipnivaeltg dnipkdfsed qgypdppnpc
      121 pvgktvddgc lentpdtaef srefqlhqhl fdpehdypgl gkwnkkllye kmkggqrrkr
      181 ratvktrale esslsgrllw ksqsqqqsvn pylqgqrldn vvakksvphf sdedkdae
//
LOCUS       XP_061013618             237 aa            linear   MAM 02-DEC-2023
DEFINITION  neuroendocrine protein 7B2 isoform X3 [Dama dama].
ACCESSION   XP_061013618
VERSION     XP_061013618.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157635.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..237
                     /product="neuroendocrine protein 7B2 isoform X3"
                     /calculated_mol_wt=26471
     Region          25..224
                     /region_name="Secretogranin_V"
                     /note="Neuroendocrine protein 7B2 precursor (Secretogranin
                     V); pfam05281"
                     /db_xref="CDD:368368"
     CDS             1..237
                     /gene="LOC133066493"
                     /coded_by="XM_061157635.1:103..816"
                     /db_xref="GeneID:133066493"
ORIGIN      
        1 mvsrmvstml sglvlwlmfg wtptaayspr tpdrvsetdi qrllhgvmeq lgiarprvey
       61 pahqamnlvg pqsieggahe glqhlgpfgn ipnivaeltg dnipkdfsed qgypdppnpc
      121 pvgktddgcl entpdtaefs refqlhqhlf dpehdypglg kwnkkllyek mkggqrrkrr
      181 atvktralee sslsgrllwk sqsqqqsvnp ylqgqrldnv vakksvphfs dedkdae
//
LOCUS       XP_061013619             212 aa            linear   MAM 02-DEC-2023
DEFINITION  neuroendocrine protein 7B2 isoform X4 [Dama dama].
ACCESSION   XP_061013619
VERSION     XP_061013619.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157636.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..212
                     /product="neuroendocrine protein 7B2 isoform X4"
                     /calculated_mol_wt=23656
     Region          25..199
                     /region_name="Secretogranin_V"
                     /note="Neuroendocrine protein 7B2 precursor (Secretogranin
                     V); pfam05281"
                     /db_xref="CDD:368368"
     CDS             1..212
                     /gene="LOC133066493"
                     /coded_by="XM_061157636.1:103..741"
                     /db_xref="GeneID:133066493"
ORIGIN      
        1 mvsrmvstml sglvlwlmfg wtptaayspr tpdrvsetdi qrllhgvmeq lgiarprvey
       61 pahqamnlvg pqsieggahe glqhlgpfgn ipnivaeltg dnipkdfsed qgypdppnpc
      121 pvgktvddgc lentpdtaef srefqlhqhl fdpehdypgl gkwnkkllye kmkggqrrkr
      181 rsvnpylqgq rldnvvakks vphfsdedkd ae
//
LOCUS       XP_061013620             211 aa            linear   MAM 02-DEC-2023
DEFINITION  neuroendocrine protein 7B2 isoform X5 [Dama dama].
ACCESSION   XP_061013620
VERSION     XP_061013620.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157637.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..211
                     /product="neuroendocrine protein 7B2 isoform X5"
                     /calculated_mol_wt=23557
     Region          25..198
                     /region_name="Secretogranin_V"
                     /note="Neuroendocrine protein 7B2 precursor (Secretogranin
                     V); pfam05281"
                     /db_xref="CDD:368368"
     CDS             1..211
                     /gene="LOC133066493"
                     /coded_by="XM_061157637.1:103..738"
                     /db_xref="GeneID:133066493"
ORIGIN      
        1 mvsrmvstml sglvlwlmfg wtptaayspr tpdrvsetdi qrllhgvmeq lgiarprvey
       61 pahqamnlvg pqsieggahe glqhlgpfgn ipnivaeltg dnipkdfsed qgypdppnpc
      121 pvgktddgcl entpdtaefs refqlhqhlf dpehdypglg kwnkkllyek mkggqrrkrr
      181 svnpylqgqr ldnvvakksv phfsdedkda e
//
LOCUS       XP_061013621             627 aa            linear   MAM 02-DEC-2023
DEFINITION  rho GTPase-activating protein 11A isoform X6 [Dama dama].
ACCESSION   XP_061013621
VERSION     XP_061013621.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157638.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..627
                     /product="rho GTPase-activating protein 11A isoform X6"
                     /calculated_mol_wt=69664
     Region          49..249
                     /region_name="RhoGAP-ARHGAP11A"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain of ArhGAP11A-like proteins. The
                     mouse homolog of human ArhGAP11A has been detected as a
                     gene exclusively expressed in immature ganglion cells,
                     potentially playing a role in retinal...; cd04394"
                     /db_xref="CDD:239859"
     Site            order(90,125,129,197,200..201,228)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239859"
     Site            90
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239859"
     Region          441..614
                     /region_name="Secretogranin_V"
                     /note="Neuroendocrine protein 7B2 precursor (Secretogranin
                     V); pfam05281"
                     /db_xref="CDD:368368"
     CDS             1..627
                     /gene="LOC133066493"
                     /coded_by="XM_061157638.1:606..2489"
                     /db_xref="GeneID:133066493"
ORIGIN      
        1 msgmwdqrlv rlavvqqlra aygikvkggr aqsdrrrpet atteivgkif gvplnalpqs
       61 vvpeyghips flvdactsle ehvhteglfr ksgsvirlka lknkldhger clssappcdt
      121 agllkqffre lpepilpadl healfkaqql kteeknkatl llsclmadht idilryffkf
      181 lrkvslrsse nkmdssnlav ifapnllqts eghekmsant ekklrlqaav vqtfidyasd
      241 ighvpdfile ripamlgidg lcattslegf eegdyetpgd ckrkrrqsvg dfvsgalnkf
      301 ksnrtpsitp qqeriaqlsv sptiltpnak rklpvdshgf sskkrksikh nfnfellpsn
      361 lfnssstpvs vhcdtspegs sqssfspvai sgnhlistnv lrrskrlask kvcrlkmvsr
      421 mvstmlsglv lwlmfgwtpt aaysprtpdr vsetdiqrll hgvmeqlgia rprveypahq
      481 amnlvgpqsi eggaheglqh lgpfgnipni vaeltgdnip kdfsedqgyp dppnpcpvgk
      541 tddgclentp dtaefsrefq lhqhlfdpeh dypglgkwnk kllyekmkgg qrrkrrsvnp
      601 ylqgqrldnv vakksvphfs dedkdae
//
LOCUS       XP_061013622             195 aa            linear   MAM 02-DEC-2023
DEFINITION  gremlin-1 isoform X1 [Dama dama].
ACCESSION   XP_061013622
VERSION     XP_061013622.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157639.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..195
                     /product="gremlin-1 isoform X1"
                     /calculated_mol_wt=21676
     Region          83..190
                     /region_name="DAN"
                     /note="DAN domain; pfam03045"
                     /db_xref="CDD:460786"
     CDS             1..195
                     /gene="GREM1"
                     /coded_by="XM_061157639.1:310..897"
                     /db_xref="GeneID:133066495"
ORIGIN      
        1 msdvsiclss smsrtaytvg alllllgtll paaegkkkgs qgaipppdka qhndseqtqs
       61 pqqpgsrnrg rgqgrgtamp geevlessqe alhvterkyl krdwcktqpl kqtiheegcn
      121 srtiinrfcy gqcnsfyipr hirkeegsfq scsfckpkkf ttmmvtlncp elqpptkkkr
      181 vtrvkqcrci sidld
//
LOCUS       XP_061013623             184 aa            linear   MAM 02-DEC-2023
DEFINITION  gremlin-1 isoform X2 [Dama dama].
ACCESSION   XP_061013623
VERSION     XP_061013623.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157640.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..184
                     /product="gremlin-1 isoform X2"
                     /calculated_mol_wt=20566
     Region          72..179
                     /region_name="DAN"
                     /note="DAN domain; pfam03045"
                     /db_xref="CDD:460786"
     CDS             1..184
                     /gene="GREM1"
                     /coded_by="XM_061157640.1:154..708"
                     /db_xref="GeneID:133066495"
ORIGIN      
        1 msrtaytvga lllllgtllp aaegkkkgsq gaipppdkaq hndseqtqsp qqpgsrnrgr
       61 gqgrgtampg eevlessqea lhvterkylk rdwcktqplk qtiheegcns rtiinrfcyg
      121 qcnsfyiprh irkeegsfqs csfckpkkft tmmvtlncpe lqpptkkkrv trvkqcrcis
      181 idld
//
LOCUS       XP_061013625             184 aa            linear   MAM 02-DEC-2023
DEFINITION  gremlin-1 isoform X2 [Dama dama].
ACCESSION   XP_061013625
VERSION     XP_061013625.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157642.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..184
                     /product="gremlin-1 isoform X2"
                     /calculated_mol_wt=20566
     Region          72..179
                     /region_name="DAN"
                     /note="DAN domain; pfam03045"
                     /db_xref="CDD:460786"
     CDS             1..184
                     /gene="GREM1"
                     /coded_by="XM_061157642.1:291..845"
                     /db_xref="GeneID:133066495"
ORIGIN      
        1 msrtaytvga lllllgtllp aaegkkkgsq gaipppdkaq hndseqtqsp qqpgsrnrgr
       61 gqgrgtampg eevlessqea lhvterkylk rdwcktqplk qtiheegcns rtiinrfcyg
      121 qcnsfyiprh irkeegsfqs csfckpkkft tmmvtlncpe lqpptkkkrv trvkqcrcis
      181 idld
//
LOCUS       XP_061013626            1417 aa            linear   MAM 02-DEC-2023
DEFINITION  formin-1 isoform X1 [Dama dama].
ACCESSION   XP_061013626
VERSION     XP_061013626.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157643.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1417
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1417
                     /product="formin-1 isoform X1"
                     /calculated_mol_wt=156414
     Region          <379..721
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          971..1368
                     /region_name="FH2"
                     /note="Formin Homology 2 Domain; smart00498"
                     /db_xref="CDD:214697"
     CDS             1..1417
                     /gene="FMN1"
                     /coded_by="XM_061157643.1:16..4269"
                     /db_xref="GeneID:133066496"
ORIGIN      
        1 megthctlql rkpitelcyi sfylprgevr gfsykdtitl draskgfhnc yqvregsdih
       61 slslqpsehp gdiffkpipt kdiltelykl taererllag llssdhilgi tmgnqegklp
      121 elsvslaped dsfqsagdwl gepavgclnk rsshgikkar rfggrrgsfd glsqsslqkr
      181 trrkghggqe lapllgkdqv ysssslpvsr trphlwllee rgnlllngtl tsslrrresc
      241 tlevprtlda dsgsgcikkp sedvglgrgg lppdcsstep gddgarelkr tsrrplhqqt
      301 glteshkepe kkpeaergrr akaaewthrk kpvsrvvarv qdlstqvqrv vkthpegegk
      361 iapglaapae fipsadlltl pgaeagawga rgldkeqrrd rswqpsagec ppastegavn
      421 kvllkviese klddaaegkr lgfpfgtiga htlpetrsrr gaglgrgktl fldlprgssd
      481 pgsdekrlpp palaalgsvi nnssfppstr krmspvpspc sprlpspqqh hrilrlsspp
      541 gereaaldds lsgrsrafcg slsadtlepp ssakvtetkg asssslrvgq prlvpreppe
      601 ktlgpgrtta qpqhqsppgt ssegfardgf seqtaakdlp skdggawvla sragpacpfl
      661 lheerekpnr selhldlhpd hspteqddri pgrlqavwpp pktkdteekv glkyteaeyq
      721 aailhlkreh keeienlqaq felqafhirg ehavitarle etienlkhei ehrrqggcee
      781 mrdvcvstdd dcppktfrnv ciqtdretfl kpcegegktt rsnqiipkkl nisslsqlsp
      841 pndnkdtcvp paegsslnqq ratpsppppp papplpaaip pppplqpglg plppappppp
      901 vntgpppppp pplppsagpp ppppppplpp piplpggggp ppapappgla pppppglffg
      961 vgpsssqcpr kpaiepscpm kplywtriqi sdksqnstpt lwdsleepdi rdtsefeylf
     1021 skdttqqkkk plsetyekks kvkkiiklld gkrsqtvgil isslhlemkd iqqaifnvdd
     1081 svvdletlaa lyenraqede lvkirkyyet skeeelklld kpeqflhela qipnfaeraq
     1141 ciifrsvfse gitalhrkve iitraskgll hmksvkdila lilafgnymn ggnrtrgqad
     1201 gysleilpkl kdvksrdngi nlvdyvvkyy lryydqeagt eksvfplpep qdfflasqvk
     1261 fedlikdlrk lkrqleasek qmavvckesp keylqpfkdr leeffqkakk ehkmeeshle
     1321 naqksfettv gyfgmkpksg ekeitpnyvf mvwyefcsdf ktiwkreskn iskerlkmaq
     1381 esvskltaek kvetkkinpt aslkerlrqk easvstn
//
LOCUS       XP_061013627            1326 aa            linear   MAM 02-DEC-2023
DEFINITION  formin-1 isoform X2 [Dama dama].
ACCESSION   XP_061013627
VERSION     XP_061013627.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157644.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1326
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1326
                     /product="formin-1 isoform X2"
                     /calculated_mol_wt=145532
     Region          <379..721
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          971..1307
                     /region_name="FH2"
                     /note="Formin Homology 2 Domain; smart00498"
                     /db_xref="CDD:214697"
     CDS             1..1326
                     /gene="FMN1"
                     /coded_by="XM_061157644.1:16..3996"
                     /db_xref="GeneID:133066496"
ORIGIN      
        1 megthctlql rkpitelcyi sfylprgevr gfsykdtitl draskgfhnc yqvregsdih
       61 slslqpsehp gdiffkpipt kdiltelykl taererllag llssdhilgi tmgnqegklp
      121 elsvslaped dsfqsagdwl gepavgclnk rsshgikkar rfggrrgsfd glsqsslqkr
      181 trrkghggqe lapllgkdqv ysssslpvsr trphlwllee rgnlllngtl tsslrrresc
      241 tlevprtlda dsgsgcikkp sedvglgrgg lppdcsstep gddgarelkr tsrrplhqqt
      301 glteshkepe kkpeaergrr akaaewthrk kpvsrvvarv qdlstqvqrv vkthpegegk
      361 iapglaapae fipsadlltl pgaeagawga rgldkeqrrd rswqpsagec ppastegavn
      421 kvllkviese klddaaegkr lgfpfgtiga htlpetrsrr gaglgrgktl fldlprgssd
      481 pgsdekrlpp palaalgsvi nnssfppstr krmspvpspc sprlpspqqh hrilrlsspp
      541 gereaaldds lsgrsrafcg slsadtlepp ssakvtetkg asssslrvgq prlvpreppe
      601 ktlgpgrtta qpqhqsppgt ssegfardgf seqtaakdlp skdggawvla sragpacpfl
      661 lheerekpnr selhldlhpd hspteqddri pgrlqavwpp pktkdteekv glkyteaeyq
      721 aailhlkreh keeienlqaq felqafhirg ehavitarle etienlkhei ehrrqggcee
      781 mrdvcvstdd dcppktfrnv ciqtdretfl kpcegegktt rsnqiipkkl nisslsqlsp
      841 pndnkdtcvp paegsslnqq ratpsppppp papplpaaip pppplqpglg plppappppp
      901 vntgpppppp pplppsagpp ppppppplpp piplpggggp ppapappgla pppppglffg
      961 vgpsssqcpr kpaiepscpm kplywtriqi sdksqnstpt lwdsleepdi rdtsefeylf
     1021 skdttqqkkk plsetyekks kvkkiiklld gkrsqtvgil isslhlemkd iqqaifnvdd
     1081 svvdletlaa lyenraqede lvkirkyyet skeeelklld kpeqflhela qipnfaeraq
     1141 ciifrsvfse gitalhrkve iitraskgll hmksvkdila lilafgnymn ggnrtrgqad
     1201 gysleilpkl kdvksrdngi nlvdyvvkyy lryydqeagt eksvfplpep qdfflasqvk
     1261 fedlikdlrk lkrqleasek qmavvckesp keylqpfkdr leeffqkelp egrtaageah
     1321 tlhgpk
//
LOCUS       XP_061013628            1318 aa            linear   MAM 02-DEC-2023
DEFINITION  formin-1 isoform X3 [Dama dama].
ACCESSION   XP_061013628
VERSION     XP_061013628.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157645.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1318
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1318
                     /product="formin-1 isoform X3"
                     /calculated_mol_wt=145528
     Region          272..>619
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          872..1269
                     /region_name="FH2"
                     /note="Formin Homology 2 Domain; smart00498"
                     /db_xref="CDD:214697"
     CDS             1..1318
                     /gene="FMN1"
                     /coded_by="XM_061157645.1:16..3972"
                     /db_xref="GeneID:133066496"
ORIGIN      
        1 megthctlql rkpitelcyi sfylprgevr gfsykdtitl draskgfhnc yqvregsdih
       61 slslqpsehp gdiffkpipt kdiltelykl taererllag llssdhilgi tmgnqegklp
      121 elsvslaped dsfqsagdwl gepavgclnk rsshgikkar rfggrrgsfd glsqsslqkr
      181 trrkghggqe lapllgkdqv ysssslpvsr trphlwllee rgnlllngtl tsslrrresc
      241 tlevprtlda dsgsgcikkp sedvglgrgg lppdcsstep gddgarelkr tsrrplhqqt
      301 glteshkepe kkpeaergrr akaaewthrk kpvsrvvarv qdlstqvqrv vkthpegegk
      361 iapglaapae fipsadlltl pgaeagawga rgldkeqrrd rswqpsagec ppastegavn
      421 kvllkviese klddaaegkr lgfpfgtiga htlpetrsrr gaglgrgktl fldlprgssd
      481 pgsdekrlpp palaalgsvi nnssfppstr krmspvpspc sprlpspqqh hrilrlsspp
      541 gereaaldds lsgrsrafcg slsadtlepp ssakvtetkg asssslrvgq prlvpreppe
      601 ktlgpgrtta qpqhqsppey qaailhlkre hkeeienlqa qfelqafhir gehavitarl
      661 eetienlkhe iehrrqggce emrdvcvstd ddcppktfrn vciqtdretf lkpcegegkt
      721 trsnqiipkk lnisslsqls ppndnkdtcv ppaegsslnq qratpspppp ppapplpaai
      781 ppppplqpgl gplppapppp pvntgppppp ppplppsagp pppppppplp ppiplpgggg
      841 pppapappgl apppppglff gvgpsssqcp rkpaiepscp mkplywtriq isdksqnstp
      901 tlwdsleepd irdtsefeyl fskdttqqkk kplsetyekk skvkkiikll dgkrsqtvgi
      961 lisslhlemk diqqaifnvd dsvvdletla alyenraqed elvkirkyye tskeeelkll
     1021 dkpeqflhel aqipnfaera qciifrsvfs egitalhrkv eiitraskgl lhmksvkdil
     1081 alilafgnym nggnrtrgqa dgysleilpk lkdvksrdng inlvdyvvky ylryydqeag
     1141 teksvfplpe pqdfflasqv kfedlikdlr klkrqlease kqmavvckes pkeylqpfkd
     1201 rleeffqkak kehkmeeshl enaqksfett vgyfgmkpks gekeitpnyv fmvwyefcsd
     1261 fktiwkresk niskerlkma qesvskltae kkvetkkinp taslkerlrq keasvstn
//
LOCUS       XP_061013629            1193 aa            linear   MAM 02-DEC-2023
DEFINITION  formin-1 isoform X4 [Dama dama].
ACCESSION   XP_061013629
VERSION     XP_061013629.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157646.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1193
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1193
                     /product="formin-1 isoform X4"
                     /calculated_mol_wt=131144
     Region          747..1144
                     /region_name="FH2"
                     /note="Formin Homology 2 Domain; smart00498"
                     /db_xref="CDD:214697"
     CDS             1..1193
                     /gene="FMN1"
                     /coded_by="XM_061157646.1:325..3906"
                     /db_xref="GeneID:133066496"
ORIGIN      
        1 meeggnvlsg sdgskpeqpe agldpalsil tkfsmkslfg ftsklesvkp eeedavlkaf
       61 rnlvvvsssg sdlqeaeaqv ppdhgndgkt kvetqmeleg sprgeeeagi slpgqellpl
      121 aalnvnqdnv ilvrgtlvnt tsdsdsddgg qepeegsktn rprspggvls epseepqekp
      181 gdgrentaps drgdaelsge gpqrtlqeis ckldpdkggl rtehspcqre ageeasiapp
      241 atadqdasvg vtentsskkv vpgeksfqlp affsglrvlk kgataegget iteikpkdgd
      301 lallkltqpv qrslaqagpp tvkkgektny pkatptlleq lsqllnidvp kaepkaedpe
      361 qpkgeemgcg apqesqsdpg eaqtqggevk pkppetalea fkalfirppk kgstadtsel
      421 ealkrkmrhe keslravfer srsrpadgps dskspdhspt eqddripgrl qavwpppktk
      481 dteekvglky teaeyqaail hlkrehkeei enlqaqfelq afhirgehav itarleetie
      541 nlkheiehrr qggceemrdv cvstdddcpp ktfrnvciqt dretflkpce gegkttrsnq
      601 iipkklniss lsqlsppndn kdtcvppaeg sslnqqratp sppppppapp lpaaippppp
      661 lqpglgplpp apppppvntg pppppppplp psagpppppp ppplpppipl pggggpppap
      721 appglapppp pglffgvgps ssqcprkpai epscpmkply wtriqisdks qnstptlwds
      781 leepdirdts efeylfskdt tqqkkkplse tyekkskvkk iiklldgkrs qtvgilissl
      841 hlemkdiqqa ifnvddsvvd letlaalyen raqedelvki rkyyetskee elklldkpeq
      901 flhelaqipn faeraqciif rsvfsegita lhrkveiitr askgllhmks vkdilalila
      961 fgnymnggnr trgqadgysl eilpklkdvk srdnginlvd yvvkyylryy dqeagteksv
     1021 fplpepqdff lasqvkfedl ikdlrklkrq leasekqmav vckespkeyl qpfkdrleef
     1081 fqkakkehkm eeshlenaqk sfettvgyfg mkpksgekei tpnyvfmvwy efcsdfktiw
     1141 kreskniske rlkmaqesvs kltaekkvet kkinptaslk erlrqkeasv stn
//
LOCUS       XP_061013630             532 aa            linear   MAM 02-DEC-2023
DEFINITION  muscarinic acetylcholine receptor M5 [Dama dama].
ACCESSION   XP_061013630
VERSION     XP_061013630.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157647.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..532
                     /product="muscarinic acetylcholine receptor M5"
                     /calculated_mol_wt=59908
     Region          31..>225
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          33..57
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320427"
     Region          66..88
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320427"
     Region          104..126
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320427"
     Region          149..165
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320427"
     Region          191..214
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320427"
     Region          <435..514
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          441..463
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320426"
     Region          474..499
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320426"
     CDS             1..532
                     /gene="CHRM5"
                     /coded_by="XM_061157647.1:687..2285"
                     /db_xref="GeneID:133066498"
ORIGIN      
        1 megesyynas tvngtpvshq plerhglwev itiavvtavv slitivgnvl vmisfkvnsq
       61 lktvnnyyll slacadliig ifsmnlytty ilmgrwalgs lacdlwlald yvasnasvmn
      121 llvisfdryf sitrpltyra krtpkragim iglawlisfi lwapailcwq ylvgertvpp
      181 decqiqflse ptitfstaia afyipvsvmt ilycriyret ekrtkdladl qgsdsvaeae
      241 krksahqall rscfscprpt laqrernqas wsssrrstsi tgkpsqatgp stewakaeql
      301 ttcssypsse dedkpttdpv fqvvyksqak dsprkelsae etqqtfvnaq tekndydtpe
      361 yflspaaahg pksqkcvayk frlvvkaegt hdtnngcrkv kimpcslpvs kdpstkgpdp
      421 slshqmtkrk rmvlvkerka aqtlsailla fiitwtpyni mvlvstfcdk cvpvtlwhlg
      481 ywlcyvnstv npicyalcnr tfrktfkmll fcrwkkkkve eklywqgnsk lp
//
LOCUS       XP_061013631              74 aa            linear   MAM 02-DEC-2023
DEFINITION  small integral membrane protein 15 [Dama dama].
ACCESSION   XP_061013631
VERSION     XP_061013631.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157648.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..74
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..74
                     /product="small integral membrane protein 15"
                     /calculated_mol_wt=8494
     Region          5..71
                     /region_name="UPF0542"
                     /note="Uncharacterized protein family UPF0542; pfam15086"
                     /db_xref="CDD:405727"
     CDS             1..74
                     /gene="LOC133066499"
                     /coded_by="XM_061157648.1:379..603"
                     /db_xref="GeneID:133066499"
ORIGIN      
        1 mfdlkawaey vvewaakdpy gflttvilal tplflasavl swklakmiea rekeqkkkqk
       61 rqeniakakr lkkd
//
LOCUS       XP_061013632             241 aa            linear   MAM 02-DEC-2023
DEFINITION  ER membrane protein complex subunit 7 [Dama dama].
ACCESSION   XP_061013632
VERSION     XP_061013632.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157649.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..241
                     /product="ER membrane protein complex subunit 7"
                     /calculated_mol_wt=26397
     Region          56..167
                     /region_name="EMC7_beta-sandw"
                     /note="ER membrane protein complex subunit 7,
                     beta-sandwich domain; pfam09430"
                     /db_xref="CDD:430607"
     CDS             1..241
                     /gene="EMC7"
                     /coded_by="XM_061157649.1:62..787"
                     /db_xref="GeneID:133066501"
ORIGIN      
        1 maatlwaffs vlllllsrda qssevsgsts egsggsgvgi gdrfkiegra vvpgvkpqdw
       61 isaarvlvdg eehvgflktd gsfvvhdips gsyvvevisp ayrfdpvrvd itskgkmrar
      121 yvnyiktsev vrlpyplqmk ssgppsyfik reswgwtdfl mnpmvmmmvl pllifvllpk
      181 vvntsdpdmr remeqsmnml nsnhelpdvs efmtrlfssk ssgksssgss ktgksgagkr
      241 r
//
LOCUS       XP_061013633             304 aa            linear   MAM 02-DEC-2023
DEFINITION  KATNB1-like protein 1 [Dama dama].
ACCESSION   XP_061013633
VERSION     XP_061013633.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157650.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..304
                     /product="KATNB1-like protein 1"
                     /calculated_mol_wt=34600
     Region          149..300
                     /region_name="Katanin_con80"
                     /note="con80 domain of Katanin; pfam13925"
                     /db_xref="CDD:464044"
     CDS             1..304
                     /gene="KATNBL1"
                     /coded_by="XM_061157650.1:147..1061"
                     /db_xref="GeneID:133066502"
ORIGIN      
        1 masethnvkk rnfcnntedh sidlprkris nftnknmkev kkspkqlaay itrtvgqavk
       61 spdklrkviy rrkkvhhpiq npcyrkkqsp ksggcvmank enelacaghl peklrhdsrt
      121 ylinssdsgs sqtespssky sgffsevsqd hetmaqvlfs rnlrlnvalt fwrkrsisel
      181 vaylvriedl gvvvdclpvl tnslqeekqy islgccvdll plvksllksr feeyiivgln
      241 wlqavikrww selsskteiv ndgniqilkq qlsglweqen hltlvpgytg niakdvdayl
      301 lqlh
//
LOCUS       XP_061013634             304 aa            linear   MAM 02-DEC-2023
DEFINITION  KATNB1-like protein 1 [Dama dama].
ACCESSION   XP_061013634
VERSION     XP_061013634.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157651.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..304
                     /product="KATNB1-like protein 1"
                     /calculated_mol_wt=34600
     Region          149..300
                     /region_name="Katanin_con80"
                     /note="con80 domain of Katanin; pfam13925"
                     /db_xref="CDD:464044"
     CDS             1..304
                     /gene="KATNBL1"
                     /coded_by="XM_061157651.1:154..1068"
                     /db_xref="GeneID:133066502"
ORIGIN      
        1 masethnvkk rnfcnntedh sidlprkris nftnknmkev kkspkqlaay itrtvgqavk
       61 spdklrkviy rrkkvhhpiq npcyrkkqsp ksggcvmank enelacaghl peklrhdsrt
      121 ylinssdsgs sqtespssky sgffsevsqd hetmaqvlfs rnlrlnvalt fwrkrsisel
      181 vaylvriedl gvvvdclpvl tnslqeekqy islgccvdll plvksllksr feeyiivgln
      241 wlqavikrww selsskteiv ndgniqilkq qlsglweqen hltlvpgytg niakdvdayl
      301 lqlh
//
LOCUS       XP_061013635            1150 aa            linear   MAM 02-DEC-2023
DEFINITION  solute carrier family 12 member 6 isoform X1 [Dama dama].
ACCESSION   XP_061013635
VERSION     XP_061013635.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157652.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1150
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1150
                     /product="solute carrier family 12 member 6 isoform X1"
                     /calculated_mol_wt=127250
     Region          109..1150
                     /region_name="2a30"
                     /note="K-Cl cotransporter; TIGR00930"
                     /db_xref="CDD:273347"
     CDS             1..1150
                     /gene="SLC12A6"
                     /coded_by="XM_061157652.1:663..4115"
                     /db_xref="GeneID:133066503"
ORIGIN      
        1 mhppettskm asvrfmvtpt kiddipglsd tspdlssrss srvrfssres vpetsrsepm
       61 semsgattsl gtvaldpasd rtsnpqdvte dpsqnsitge hsqllddghk karnaylnns
      121 nyeegdeyfd knlalfeeem dtrpkvssll srlanytnlt qgakeheeae nitegkkkpt
      181 ktpqmgtfmg vylpclqnif gvilflrltw vvgtagvlqa faivlicccc tmltaismsa
      241 iatngvvpag gsyfmisral gpefggavgl cfylgttfaa amyilgaiei flvyivpraa
      301 ifhsddalke saamlnnmrv ygtaflvlmv lvvfigvryv nkfaslflac vivsilaiya
      361 gaikssfapp hfpvcmlgnr tlssrhidvc sktkeannmt vpsklwgffc nssqffnatc
      421 deyfvhnnvt siqgipglas gvitenlwsn ylpkgeiiek psakssdvlg slnheyvlvd
      481 ittsftllvg iffpsvtgim agsnrsgdlk daqksipigt ilailttsfv ylsnvvlfga
      541 ciegvvlrdk fgdavkgnlv vgtlswpspw vivigsffst cgaglqsltg aprllqaiak
      601 dniipflrvf ghskangept wallltaaia elgiliasld lvapilsmff lmcylfvnla
      661 calqtllrtp nwrprfryyh walsfmgmsi clalmfissw yyaivamvia gmiykyieyq
      721 gaekewgdgi rglslsaarf allrleegpp htknwrpqll vllkldedlh vkhprlltfa
      781 sqlkagkglt ivgsvivgnf lenygealaa eqtikhlmea ekvkgfsqlv vaaklregis
      841 hliqscglgg mkhntvvmgw pngwrqseda rawktfigtv rvttaahlal lvaknisffp
      901 snveqfsegn idvwwivhdg gmlmllpfll kqhkvwrkcs iriftvaqle dnsiqmkkdl
      961 atflyhlrie aevevvemhd sdisaytyer tlmmeqrsqm lrhmrlskte rdreaqlvkd
     1021 rnsmlrltsi gsdeddetet yqekvhmtwt kdkymasrgq kaksmegfqd llnmrpdqsn
     1081 vrrmhtavkl nevivnkshe aklvllnmpg pprnpegden ymeflevlte glervllvrg
     1141 ggsevitiys
//
LOCUS       XP_061013636            1101 aa            linear   MAM 02-DEC-2023
DEFINITION  solute carrier family 12 member 6 isoform X2 [Dama dama].
ACCESSION   XP_061013636
VERSION     XP_061013636.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157653.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1101
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1101
                     /product="solute carrier family 12 member 6 isoform X2"
                     /calculated_mol_wt=121953
     Region          60..1101
                     /region_name="2a30"
                     /note="K-Cl cotransporter; TIGR00930"
                     /db_xref="CDD:273347"
     CDS             1..1101
                     /gene="SLC12A6"
                     /coded_by="XM_061157653.1:113..3418"
                     /db_xref="GeneID:133066503"
ORIGIN      
        1 mphftvtkve daeegaaaag sqegeprpae ikapiqhshe pdpsqnsitg ehsqllddgh
       61 kkarnaylnn snyeegdeyf dknlalfeee mdtrpkvssl lsrlanytnl tqgakeheea
      121 enitegkkkp tktpqmgtfm gvylpclqni fgvilflrlt wvvgtagvlq afaivliccc
      181 ctmltaisms aiatngvvpa ggsyfmisra lgpefggavg lcfylgttfa aamyilgaie
      241 iflvyivpra aifhsddalk esaamlnnmr vygtaflvlm vlvvfigvry vnkfaslfla
      301 cvivsilaiy agaikssfap phfpvcmlgn rtlssrhidv csktkeannm tvpsklwgff
      361 cnssqffnat cdeyfvhnnv tsiqgipgla sgvitenlws nylpkgeiie kpsakssdvl
      421 gslnheyvlv dittsftllv giffpsvtgi magsnrsgdl kdaqksipig tilailttsf
      481 vylsnvvlfg aciegvvlrd kfgdavkgnl vvgtlswpsp wvivigsffs tcgaglqslt
      541 gaprllqaia kdniipflrv fghskangep twallltaai aelgiliasl dlvapilsmf
      601 flmcylfvnl acalqtllrt pnwrprfryy hwalsfmgms iclalmfiss wyyaivamvi
      661 agmiykyiey qgaekewgdg irglslsaar fallrleegp phtknwrpql lvllkldedl
      721 hvkhprlltf asqlkagkgl tivgsvivgn flenygeala aeqtikhlme aekvkgfsql
      781 vvaaklregi shliqscglg gmkhntvvmg wpngwrqsed arawktfigt vrvttaahla
      841 llvaknisff psnveqfseg nidvwwivhd ggmlmllpfl lkqhkvwrkc siriftvaql
      901 ednsiqmkkd latflyhlri eaevevvemh dsdisaytye rtlmmeqrsq mlrhmrlskt
      961 erdreaqlvk drnsmlrlts igsdeddete tyqekvhmtw tkdkymasrg qkaksmegfq
     1021 dllnmrpdqs nvrrmhtavk lnevivnksh eaklvllnmp gpprnpegde nymeflevlt
     1081 eglervllvr gggsevitiy s
//
LOCUS       XP_061013637             183 aa            linear   MAM 02-DEC-2023
DEFINITION  ER membrane protein complex subunit 4 [Dama dama].
ACCESSION   XP_061013637
VERSION     XP_061013637.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157654.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..183
                     /product="ER membrane protein complex subunit 4"
                     /calculated_mol_wt=19956
     Region          56..170
                     /region_name="DUF1077"
                     /note="Protein of unknown function (DUF1077); pfam06417"
                     /db_xref="CDD:461902"
     CDS             1..183
                     /gene="EMC4"
                     /coded_by="XM_061157654.1:103..654"
                     /db_xref="GeneID:133066504"
ORIGIN      
        1 mtaqgslvan rgrrfkwaie lsgpgggsrg rsdrgggqgd slypvgyldk qvpdtsvqet
       61 drilvekrcw dialgplkqi pmnlfimyma gntisifptm mvcmmawrpi qalmaisatf
      121 kmlesssqkf lqglvylign lmglalavyk cqsmgllpth asdwlafiep permefsggg
      181 lll
//
LOCUS       XP_061013638              64 aa            linear   MAM 02-DEC-2023
DEFINITION  H/ACA ribonucleoprotein complex subunit 3 [Dama dama].
ACCESSION   XP_061013638
VERSION     XP_061013638.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157655.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..64
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..64
                     /product="H/ACA ribonucleoprotein complex subunit 3"
                     /calculated_mol_wt=7555
     Region          4..52
                     /region_name="Nop10p"
                     /note="Nucleolar RNA-binding protein, Nop10p family;
                     pfam04135"
                     /db_xref="CDD:427735"
     CDS             1..64
                     /gene="NOP10"
                     /coded_by="XM_061157655.1:84..278"
                     /db_xref="GeneID:133066505"
ORIGIN      
        1 mflqyylneq gervytlkkl dpmgqqtcsa hparfspddk ysrhritikk rfkvlmtqqp
       61 rpvl
//
LOCUS       XP_061013640             524 aa            linear   MAM 02-DEC-2023
DEFINITION  lysophospholipid acyltransferase LPCAT4 [Dama dama].
ACCESSION   XP_061013640
VERSION     XP_061013640.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157657.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..524
                     /product="lysophospholipid acyltransferase LPCAT4"
                     /calculated_mol_wt=57318
     Region          109..306
                     /region_name="LPLAT_LPCAT1-like"
                     /note="Lysophospholipid Acyltransferases (LPLATs) of
                     Glycerophospholipid Biosynthesis: LPCAT1-like; cd07991"
                     /db_xref="CDD:153253"
     Site            order(129,132,134,148..151,204..206)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153253"
     CDS             1..524
                     /gene="LPCAT4"
                     /coded_by="XM_061157657.1:106..1680"
                     /db_xref="GeneID:133066507"
ORIGIN      
        1 msqgspgdwa pldptpgppa ppnpfvhelh lsrlqrvkfc llgallapir vllafivlfl
       61 lwpfawlqva glteeqlqep itgwrktvch hgvlglsrll ffllgflrir vrgqrasrlq
      121 apvlvaaphs tffdpivllp cdlpkvvsra enlsvpviga llrfnqailv srhdpasrrr
      181 vveevrrrat sggkwpqvlf fpegtcsnkk allkfkpgaf iagvpvqpvl irypnsldtt
      241 swawrgpgvv kvlwltasqp csivdveflp vyrpspeesr dptlyannvq rvmaqalgip
      301 atecefvesl pvivvgrlkv alepqlwelg kvlrkaglsp gcvdagtepg rsrrisqeef
      361 akqlqlsdsq tvagafsyfq qdadglvdfr dvalalaals ggrsleeltr lafelfaeep
      421 eeqaeeqakg pgrllykdgf stilhlllgs prpaartlha elcqagarqg lslcefqdfs
      481 lhhplhgklf stylrpsqtp passpsstta langtvqapk qkgd
//
LOCUS       XP_061013641             240 aa            linear   MAM 02-DEC-2023
DEFINITION  EF-hand domain-containing protein D2 [Dama dama].
ACCESSION   XP_061013641
VERSION     XP_061013641.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157658.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..240
                     /product="EF-hand domain-containing protein D2"
                     /calculated_mol_wt=26645
     Region          96..154
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cd00051"
                     /db_xref="CDD:238008"
     Site            order(105,107,109,116,141,143,145,152)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238008"
     CDS             1..240
                     /gene="LOC133066509"
                     /coded_by="XM_061157658.1:40..762"
                     /db_xref="GeneID:133066509"
ORIGIN      
        1 matdelaskl srrlqmegeg ggeapeqpgl ngaaaaaaga pdetaealgs adeelsakll
       61 rradlnqgig epqspsrrvf npytefkefs rkqikdmekm fkeydagrdg fidlmelklm
      121 meklgapqth lglknmikev dedfdsklsf refllifrka aagelqedsg lhvlarlsei
      181 dvstegvkga ksffeakvqa mnvssrfeee ikaeqeerkk qaeemkqrka afkelqstfk
//
LOCUS       XP_061013643             440 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 5 isoform X1 [Dama dama].
ACCESSION   XP_061013643
VERSION     XP_061013643.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157660.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..440
                     /product="tetratricopeptide repeat protein 5 isoform X1"
                     /calculated_mol_wt=48706
     Region          67..>274
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          68..97
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(69,72..73,76..77,79,104,107..108,111..112,114..115,
                     140..141,144..145,148)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          102..132
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(180,183..184,187..188,190,225,228..229,232..233,
                     235..236,259,262..263)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          180..215
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          223..253
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          318..432
                     /region_name="TTC5_OB"
                     /note="Tetratricopeptide repeat protein 5 OB fold domain;
                     pfam16669"
                     /db_xref="CDD:465225"
     CDS             1..440
                     /gene="TTC5"
                     /coded_by="XM_061157660.1:43..1365"
                     /db_xref="GeneID:133066510"
ORIGIN      
        1 mmaveeeevk evlqklqelv dqlysfrecy fethsvehag rkqqdvreem ektlqqmeea
       61 agsvqgnaqv lmltgkalnv tpdyspkaee llskavklep klveawnqlg evywkkgdva
      121 aahtcfsgal thcknkvslq nlsmvlrqlr tdsgdehsrh vmdsvrqakl avqmdildgr
      181 swyilgnayl slyfntgqnp kisqqalsay aqaekvdrta ssnpdlhlnr atlhkyeeny
      241 gealegfsra aaldpawpep wqreqqlldf ltrltslles kgkvktkklq smlgnlrpah
      301 lgpcgdgryq sasgqkvtle rkplsalqpg vnsgavvlgk vvfsltteek vpftfglvds
      361 dgpcyavmvy nmvqswgvli gdsvaipepn lrlhriqhkg kdysfssvrv etplllvvng
      421 kpqgsssqaa atvasrpqce
//
LOCUS       XP_061013644             369 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 5 isoform X2 [Dama dama].
ACCESSION   XP_061013644
VERSION     XP_061013644.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157661.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..369
                     /product="tetratricopeptide repeat protein 5 isoform X2"
                     /calculated_mol_wt=41373
     Region          67..>274
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          68..97
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(69,72..73,76..77,79,104,107..108,111..112,114..115,
                     140..141,144..145,148)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          102..132
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(180,183..184,187..188,190,225,228..229,232..233,
                     235..236,259,262..263)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          180..215
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          223..253
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          318..>354
                     /region_name="TTC5_OB"
                     /note="Tetratricopeptide repeat protein 5 OB fold domain;
                     pfam16669"
                     /db_xref="CDD:465225"
     CDS             1..369
                     /gene="TTC5"
                     /coded_by="XM_061157661.1:43..1152"
                     /db_xref="GeneID:133066510"
ORIGIN      
        1 mmaveeeevk evlqklqelv dqlysfrecy fethsvehag rkqqdvreem ektlqqmeea
       61 agsvqgnaqv lmltgkalnv tpdyspkaee llskavklep klveawnqlg evywkkgdva
      121 aahtcfsgal thcknkvslq nlsmvlrqlr tdsgdehsrh vmdsvrqakl avqmdildgr
      181 swyilgnayl slyfntgqnp kisqqalsay aqaekvdrta ssnpdlhlnr atlhkyeeny
      241 gealegfsra aaldpawpep wqreqqlldf ltrltslles kgkvktkklq smlgnlrpah
      301 lgpcgdgryq sasgqkvtle rkplsalqpg vnsgavvlgk vvfsltteek vpltipfpvf
      361 vwrrpscww
//
LOCUS       XP_061013645             562 aa            linear   MAM 02-DEC-2023
DEFINITION  poly [ADP-ribose] polymerase 2 [Dama dama].
ACCESSION   XP_061013645
VERSION     XP_061013645.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157662.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..562
                     /product="poly [ADP-ribose] polymerase 2"
                     /calculated_mol_wt=63662
     Region          15..70
                     /region_name="PARP2_NTR"
                     /note="NTR (N-terminal region) domain of poly [ADP-ribose]
                     polymerase 2 (PARP-2) and similar proteins; cd22252"
                     /db_xref="CDD:412075"
     Site            order(15..19,27..36)
                     /site_type="other"
                     /note="importin alpha binding site [polypeptide binding]"
                     /db_xref="CDD:412075"
     Region          45..558
                     /region_name="PLN03124"
                     /note="poly [ADP-ribose] polymerase; Provisional"
                     /db_xref="CDD:215591"
     CDS             1..562
                     /gene="PARP2"
                     /coded_by="XM_061157662.1:95..1783"
                     /db_xref="GeneID:133066511"
ORIGIN      
        1 maarrrgtag graraervnn gktvaedppp akklrkchrv kkepvaegka dndrtedkqe
       61 svktlllkgk apvdpectak vgkahvyceg ndvydvmlnq tnlqfnnnky yliqlledda
      121 qrnfsvwmrw grvgktgqhs lvacsgdlnk akevfqkkfl dktknnwedr ekfekvpgky
      181 dmlqmdyasn tqkeeetkke kylkstlkle sqldlrvqel iklicnvqam eemmvemkyd
      241 tkkaplgklt vaqikagyqs lkkiedcira gqhgralvea cnefytriph dfglrtppli
      301 rtekelsdkv qllealgdie iaiklvktel qspehpldqh yrklqcalhp ldhesyefkv
      361 isqylqstha pthsdytmtl ldvfevekeg ekeafredlh nrmllwhgsr lsnwvgilsh
      421 glriappeap itgymfgkgi yfadmssksa nycfathlkd tgllllseva lgqcnellga
      481 npeaegllqg khstkglgkm apsparaitl ngstvplgpa sdtgilnpeg ytlnynefiv
      541 ynpnqvrmry llkvrfnflq lw
//
LOCUS       XP_061013646             277 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase CCNB1IP1 [Dama dama].
ACCESSION   XP_061013646
VERSION     XP_061013646.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157663.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..277
                     /product="E3 ubiquitin-protein ligase CCNB1IP1"
                     /calculated_mol_wt=31293
     Region          10..53
                     /region_name="zf-RING_5"
                     /note="zinc-RING finger domain; pfam14634"
                     /db_xref="CDD:434085"
     Region          131..>185
                     /region_name="Atg16_CCD"
                     /note="Coiled-coiled domain of autophagy-related 16
                     (Atg16) family proteins; cl46300"
                     /db_xref="CDD:480640"
     CDS             1..277
                     /gene="CCNB1IP1"
                     /coded_by="XM_061157663.1:320..1153"
                     /db_xref="GeneID:133066512"
ORIGIN      
        1 mslcedmllc nyrkcrvkls gyawvtacsh ifcdqhgsge fsrspaicpa cnstlsgkld
       61 ivrtelspse eykamvlagl rpeivldiss ralafwtyqv hqerlyqeyn fskaeghlkq
      121 mekiytqqiq skdveltsmk gevtsmkkvl eeykkkfsdi seklmernrq yqklqglyds
      181 lrlrnitian qdstlepsmi aqsgvfgfpl gnnskfplds tpvrnrgggd gdfqfrpffv
      241 gsptapepan sffsfaspnn eleqqpvssr afkvkri
//
LOCUS       XP_061013647             277 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase CCNB1IP1 [Dama dama].
ACCESSION   XP_061013647
VERSION     XP_061013647.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157664.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..277
                     /product="E3 ubiquitin-protein ligase CCNB1IP1"
                     /calculated_mol_wt=31293
     Region          10..53
                     /region_name="zf-RING_5"
                     /note="zinc-RING finger domain; pfam14634"
                     /db_xref="CDD:434085"
     Region          131..>185
                     /region_name="Atg16_CCD"
                     /note="Coiled-coiled domain of autophagy-related 16
                     (Atg16) family proteins; cl46300"
                     /db_xref="CDD:480640"
     CDS             1..277
                     /gene="CCNB1IP1"
                     /coded_by="XM_061157664.1:342..1175"
                     /db_xref="GeneID:133066512"
ORIGIN      
        1 mslcedmllc nyrkcrvkls gyawvtacsh ifcdqhgsge fsrspaicpa cnstlsgkld
       61 ivrtelspse eykamvlagl rpeivldiss ralafwtyqv hqerlyqeyn fskaeghlkq
      121 mekiytqqiq skdveltsmk gevtsmkkvl eeykkkfsdi seklmernrq yqklqglyds
      181 lrlrnitian qdstlepsmi aqsgvfgfpl gnnskfplds tpvrnrgggd gdfqfrpffv
      241 gsptapepan sffsfaspnn eleqqpvssr afkvkri
//
LOCUS       XP_061013648            2653 aa            linear   MAM 02-DEC-2023
DEFINITION  telomerase protein component 1 isoform X1 [Dama dama].
ACCESSION   XP_061013648
VERSION     XP_061013648.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157665.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2653
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2653
                     /product="telomerase protein component 1 isoform X1"
                     /calculated_mol_wt=293898
     Region          1..29
                     /region_name="TEP1_N"
                     /note="TEP1 N-terminal domain; pfam05386"
                     /db_xref="CDD:428450"
     Region          31..59
                     /region_name="TEP1_N"
                     /note="TEP1 N-terminal domain; pfam05386"
                     /db_xref="CDD:428450"
     Region          61..89
                     /region_name="TEP1_N"
                     /note="TEP1 N-terminal domain; pfam05386"
                     /db_xref="CDD:428450"
     Region          91..119
                     /region_name="TEP1_N"
                     /note="TEP1 N-terminal domain; pfam05386"
                     /db_xref="CDD:428450"
     Region          121..149
                     /region_name="TEP1_N"
                     /note="TEP1 N-terminal domain; pfam05386"
                     /db_xref="CDD:428450"
     Region          261..714
                     /region_name="TROVE"
                     /note="TROVE domain; pfam05731"
                     /db_xref="CDD:461724"
     Region          725..926
                     /region_name="DUF5920"
                     /note="Domain of unknown function (DUF5920); pfam19334"
                     /db_xref="CDD:466045"
     Region          937..1045
                     /region_name="DUF4062"
                     /note="Domain of unknown function (DUF4062); pfam13271"
                     /db_xref="CDD:463823"
     Region          1197..1372
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Region          1556..1683
                     /region_name="APAF1_C"
                     /note="APAF-1 helical domain; pfam17908"
                     /db_xref="CDD:465560"
     Region          1676..2127
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          1715..1751
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1757..1792
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1797..1834
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1839..1875
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1880..1916
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1884..2343
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          1923..1958
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2007..2030
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2100..2140
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2145..2180
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2187..2219
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2226..2270
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2236..2610
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          2276..2302
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2318..2342
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..2653
                     /gene="TEP1"
                     /coded_by="XM_061157665.1:211..8172"
                     /db_xref="GeneID:133066514"
ORIGIN      
        1 meklhgcvst hmdilslkkq clatlpdskm lekplghvst ysdilslenr clatlpdlkt
       61 lekppghvsa hsdilslenr clatlpdlkt lekppgrvsa hsdilslenr clatlpdlkt
      121 lekppghvsa hsdilslenr clatltilks pvsispllpn lqishlaqad lcnlkssnhl
      181 lsepqasgaq clseglgllt cprvsktisa pervqeavlg rwsssgekkp eekewaevqm
      241 pfyslnlgee eeeepalkls pgdsesqpep teqvfqevkm vlmsflcssl vanvntddaa
      301 ystqafllkv csevaqfepe filkaslyar qqlnvrdvan kvlaiaaflp lsrpylrryf
      361 caivqlpsdw iqvarfyqll creredclap lpaclraamr dkfsqfdeyq lakynprkhr
      421 akrrsrrppr ppkehrfset qtylprfiwp irdeqrmfet tyssvsekks eqrftlkklv
      481 qrlhihepaq lvqallgcry psnlqafsrs hlpgpwdssr agkrmklarp etwerelslr
      541 gnkatvweel idsgklpfma mlrnlrnllr vgisarhhel vlqrlqhakt vihsrqfpfr
      601 flnahdsind leaqlekkel pfpsntqlik qiiikntkyg kkhayswqfr qpsrrelrta
      661 mmipviyeql krkkleihka rqwkcdreml aryrqaleta vnlsvkhslp plpgctllvy
      721 ltdasadril pksnpqgppl nyvllliamm mvrteqvell lcgggivkta vikaeegilk
      781 tatelqaqvq ksdenceqsl ttlgkhllsl atqrvpvdrv ivfgrttnek linaakqlfw
      841 qhvnpkclfv gvllrasyls tdlnpndvtl sgctdgilkf iaergasrll ehvgqmdkif
      901 kippppgktg vqslqpleen tpsplapvsq lgwrsirlfi sstfrdmhge rdlllrsllp
      961 alqaraapyr islhaidlrw giteeetrrn rqlevclgev ensqlfvgil gsrygyvppn
     1021 yslpdhphfr waqqypagrs vtemevmqfl nrglrlqpsa qpllyfrdss flssvpdawk
     1081 sdfiseseea ahriselksy lsrqegitcr ryrcewggva agrpyvggle efgqlvlqdv
     1141 wsmiqklylq pgaqpeepvp dddlvqanfq qlkkppspar prllqdtarq lmqhqgrlsl
     1201 vtgqsgqgkt aflaslvsal qapdgaaaap lvffhfsgar pdhslaltli rrlcaylhsr
     1261 leepsalpst yrglvwelqq rllpksaqsl ktgqplvliv dgadrlvdqr gqlisdwipk
     1321 tlprwvhlvl svssdsglge tlqqsqgahv vvlgpleppa rarlvreela lygkrleesp
     1381 fnnqmrlllv krgsvlplyl hlvtdhlrlf tlyeqvserl rtlpatvpll lqhvlgtleq
     1441 ehgpdvlpqa latleatrsg ltvdqlhgvl sawrilprgs ktweeavaag nsgdpypmgp
     1501 faylvqslrs llgegplerp garlclqdgp lrtaarcryg krpelektah lltaaqlwkt
     1561 cdpdasgtfr rcppealadl pyhllqsgnr gllakfltsl hvvaahvelg ltsqlleaha
     1621 lyassvpdge qklpeadvaa fhtflrqqap ilsryplllh qqvanqplds plccqaprlc
     1681 qrqhlqrmlr wlnkpqtlgh qqssslslav sssptavafs pngqraavgt angtvylldl
     1741 rtwqeersmv sggdgvsscs flsdntlflt afdgllelwd lqhgcwvlqi qahqyqitsc
     1801 clspdrrlla tvclggglkl wdtvrgqlas qhtcpkplnc vafhpegqvi avgswagsfs
     1861 vfhmdglrvt kelgapgasv rtlafgvsgr vvavgrldrm velwawqega rlaafpahqg
     1921 fvaaalflra gcqlltaged gkvqvwsgsl grprgclgcp hlspalsval spdgdqvavg
     1981 yradgiriyr issasqgaqg qvldvavsal twlsskvlvs gaedgalqgw llqggslqsl
     2041 wllsrhrkpv lglatsqell avasedftvr lwlrqllmlp qktedfprst elrghegpvs
     2101 ccsfstdgcr latggrdrsl lcwdvrtpka pilicsfsac hrdwvtgcaw tkdsllvscs
     2161 sdgsvalwdp esrqqlghfl ghqhavsavv aveehvvsvg rdgtlrvwdh qgvemtsipa
     2221 hsgpishcva alephaagqp gsellvvtvg ldgatrlwhp llvfqthtll ghsgpvsaaa
     2281 vsetsglllt tsedgslrlw qvpeeaddty rprspaaita vawapdgsaa vsgnqagelt
     2341 lwqeakavvt vqapgcisal lwysahtliv vsanekvsew qvklqmgstp rnvslrlnrv
     2401 lqedlgfltg vglapdghsf ilakadlrll hmkpgdepsv iwesysedpm mlsthqdygv
     2461 fvlqsrklqv lpfsgqkelg efeeclefdl nlenpsntli svtqakpgse ssflcassdg
     2521 mlwnlvrctn egewitgniw qkkaempatq tsetescist dtyswstvte lktqqrrkih
     2581 sgpvtalhvl pellvtaskd rdvklwerps mqllglfrce gavsclepwl gpdstlqlav
     2641 gdtqgnvyfl swe
//
LOCUS       XP_061013649            2582 aa            linear   MAM 02-DEC-2023
DEFINITION  telomerase protein component 1 isoform X2 [Dama dama].
ACCESSION   XP_061013649
VERSION     XP_061013649.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157666.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2582
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2582
                     /product="telomerase protein component 1 isoform X2"
                     /calculated_mol_wt=286590
     Region          1..29
                     /region_name="TEP1_N"
                     /note="TEP1 N-terminal domain; pfam05386"
                     /db_xref="CDD:428450"
     Region          31..59
                     /region_name="TEP1_N"
                     /note="TEP1 N-terminal domain; pfam05386"
                     /db_xref="CDD:428450"
     Region          61..89
                     /region_name="TEP1_N"
                     /note="TEP1 N-terminal domain; pfam05386"
                     /db_xref="CDD:428450"
     Region          91..119
                     /region_name="TEP1_N"
                     /note="TEP1 N-terminal domain; pfam05386"
                     /db_xref="CDD:428450"
     Region          121..149
                     /region_name="TEP1_N"
                     /note="TEP1 N-terminal domain; pfam05386"
                     /db_xref="CDD:428450"
     Region          261..714
                     /region_name="TROVE"
                     /note="TROVE domain; pfam05731"
                     /db_xref="CDD:461724"
     Region          725..926
                     /region_name="DUF5920"
                     /note="Domain of unknown function (DUF5920); pfam19334"
                     /db_xref="CDD:466045"
     Region          937..1045
                     /region_name="DUF4062"
                     /note="Domain of unknown function (DUF4062); pfam13271"
                     /db_xref="CDD:463823"
     Region          1197..1372
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Region          1556..1683
                     /region_name="APAF1_C"
                     /note="APAF-1 helical domain; pfam17908"
                     /db_xref="CDD:465560"
     Region          1676..2101
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          1717..1751
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1756..1791
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1797..1834
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1839..1875
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1880..1916
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1923..1958
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1965..2022
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2018..2310
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(2024,2042,2046,2052..2053,2065,2070,2087,2091,
                     2097..2098,2110..2111,2126,2131,2137..2138,2150,2176,2181,
                     2187,2200..2201,2219,2223,2229..2230,2242..2243,2260,2265,
                     2271..2272,2284,2299,2303,2309..2310)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          2028..2068
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2074..2097
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2116..2148
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2155..2199
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2165..2539
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          2205..2231
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2247..2271
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2283..2311
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..2582
                     /gene="TEP1"
                     /coded_by="XM_061157666.1:211..7959"
                     /db_xref="GeneID:133066514"
ORIGIN      
        1 meklhgcvst hmdilslkkq clatlpdskm lekplghvst ysdilslenr clatlpdlkt
       61 lekppghvsa hsdilslenr clatlpdlkt lekppgrvsa hsdilslenr clatlpdlkt
      121 lekppghvsa hsdilslenr clatltilks pvsispllpn lqishlaqad lcnlkssnhl
      181 lsepqasgaq clseglgllt cprvsktisa pervqeavlg rwsssgekkp eekewaevqm
      241 pfyslnlgee eeeepalkls pgdsesqpep teqvfqevkm vlmsflcssl vanvntddaa
      301 ystqafllkv csevaqfepe filkaslyar qqlnvrdvan kvlaiaaflp lsrpylrryf
      361 caivqlpsdw iqvarfyqll creredclap lpaclraamr dkfsqfdeyq lakynprkhr
      421 akrrsrrppr ppkehrfset qtylprfiwp irdeqrmfet tyssvsekks eqrftlkklv
      481 qrlhihepaq lvqallgcry psnlqafsrs hlpgpwdssr agkrmklarp etwerelslr
      541 gnkatvweel idsgklpfma mlrnlrnllr vgisarhhel vlqrlqhakt vihsrqfpfr
      601 flnahdsind leaqlekkel pfpsntqlik qiiikntkyg kkhayswqfr qpsrrelrta
      661 mmipviyeql krkkleihka rqwkcdreml aryrqaleta vnlsvkhslp plpgctllvy
      721 ltdasadril pksnpqgppl nyvllliamm mvrteqvell lcgggivkta vikaeegilk
      781 tatelqaqvq ksdenceqsl ttlgkhllsl atqrvpvdrv ivfgrttnek linaakqlfw
      841 qhvnpkclfv gvllrasyls tdlnpndvtl sgctdgilkf iaergasrll ehvgqmdkif
      901 kippppgktg vqslqpleen tpsplapvsq lgwrsirlfi sstfrdmhge rdlllrsllp
      961 alqaraapyr islhaidlrw giteeetrrn rqlevclgev ensqlfvgil gsrygyvppn
     1021 yslpdhphfr waqqypagrs vtemevmqfl nrglrlqpsa qpllyfrdss flssvpdawk
     1081 sdfiseseea ahriselksy lsrqegitcr ryrcewggva agrpyvggle efgqlvlqdv
     1141 wsmiqklylq pgaqpeepvp dddlvqanfq qlkkppspar prllqdtarq lmqhqgrlsl
     1201 vtgqsgqgkt aflaslvsal qapdgaaaap lvffhfsgar pdhslaltli rrlcaylhsr
     1261 leepsalpst yrglvwelqq rllpksaqsl ktgqplvliv dgadrlvdqr gqlisdwipk
     1321 tlprwvhlvl svssdsglge tlqqsqgahv vvlgpleppa rarlvreela lygkrleesp
     1381 fnnqmrlllv krgsvlplyl hlvtdhlrlf tlyeqvserl rtlpatvpll lqhvlgtleq
     1441 ehgpdvlpqa latleatrsg ltvdqlhgvl sawrilprgs ktweeavaag nsgdpypmgp
     1501 faylvqslrs llgegplerp garlclqdgp lrtaarcryg krpelektah lltaaqlwkt
     1561 cdpdasgtfr rcppealadl pyhllqsgnr gllakfltsl hvvaahvelg ltsqlleaha
     1621 lyassvpdge qklpeadvaa fhtflrqqap ilsryplllh qqvanqplds plccqaprlc
     1681 qrqhlqrmlr wlnkpqtlgh qqssslslav sssptavafs pngqraavgt angtvylldl
     1741 rtwqeersmv sggdgvsscs flsdntlflt afdgllelwd lqhgcwvlqi qahqyqitsc
     1801 clspdrrlla tvclggglkl wdtvrgqlas qhtcpkplnc vafhpegqvi avgswagsfs
     1861 vfhmdglrvt kelgapgasv rtlafgvsgr vvavgrldrm velwawqega rlaafpahqg
     1921 fvaaalflra gcqlltaged gkvqvwsgsl grprgclgcp hlspalsval spdgdqvavg
     1981 yradgiriyr issedftvrl wlrqllmlpq ktedfprste lrghegpvsc csfstdgcrl
     2041 atggrdrsll cwdvrtpkap ilicsfsach rdwvtgcawt kdsllvscss dgsvalwdpe
     2101 srqqlghflg hqhavsavva veehvvsvgr dgtlrvwdhq gvemtsipah sgpishcvaa
     2161 lephaagqpg sellvvtvgl dgatrlwhpl lvfqthtllg hsgpvsaaav setsgllltt
     2221 sedgslrlwq vpeeaddtyr prspaaitav awapdgsaav sgnqageltl wqeakavvtv
     2281 qapgcisall wysahtlivv sanekvsewq vklqmgstpr nvslrlnrvl qedlgfltgv
     2341 glapdghsfi lakadlrllh mkpgdepsvi wesysedpmm lsthqdygvf vlqsrklqvl
     2401 pfsgqkelge feeclefdln lenpsntlis vtqakpgses sflcassdgm lwnlvrctne
     2461 gewitgniwq kkaempatqt setescistd tyswstvtel ktqqrrkihs gpvtalhvlp
     2521 ellvtaskdr dvklwerpsm qllglfrceg avsclepwlg pdstlqlavg dtqgnvyfls
     2581 we
//
LOCUS       XP_061013650             335 aa            linear   MAM 02-DEC-2023
DEFINITION  tRNA N6-adenosine threonylcarbamoyltransferase isoform X1 [Dama
            dama].
ACCESSION   XP_061013650
VERSION     XP_061013650.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157667.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..335
                     /product="tRNA N6-adenosine threonylcarbamoyltransferase
                     isoform X1"
                     /calculated_mol_wt=36371
     Region          4..310
                     /region_name="ASKHA_NBD_OSGEP_like_euk"
                     /note="nucleotide-binding domain (NBD) of
                     O-sialoglycoprotein endopeptidase (OSGEP) and similar
                     proteins mainly from eukaryotes; cd24132"
                     /db_xref="CDD:466982"
     CDS             1..335
                     /gene="OSGEP"
                     /coded_by="XM_061157667.1:381..1388"
                     /db_xref="GeneID:133066516"
ORIGIN      
        1 mpavlgfegs ankigvgvvr dgkvlanprr tyvtppgtgf lpgdtarhhr avildllqea
       61 lteagltsed idciaytkgp gmgaplvsva vvartvaqlw nkpllgvnhc ighiemgrli
      121 tgatnptvly vsggntqvia ysehryrifg etidiavgnc ldrfarvlki sndpspgyni
      181 eqmakrgkkl velpytvkgm dvsfsgilsf iedvaqrmla tgectpedlc fslqetvfam
      241 lveiterama hcgsqealiv ggvgcnvrlq emmetmcqer garlfatder fcidngamia
      301 qagwemfqag hrtplsesgi tqryrtdeve vtwrd
//
LOCUS       XP_061013651             302 aa            linear   MAM 02-DEC-2023
DEFINITION  tRNA N6-adenosine threonylcarbamoyltransferase isoform X2 [Dama
            dama].
ACCESSION   XP_061013651
VERSION     XP_061013651.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157668.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..302
                     /product="tRNA N6-adenosine threonylcarbamoyltransferase
                     isoform X2"
                     /calculated_mol_wt=33020
     Region          4..277
                     /region_name="ASKHA_NBD_OSGEP_like_euk"
                     /note="nucleotide-binding domain (NBD) of
                     O-sialoglycoprotein endopeptidase (OSGEP) and similar
                     proteins mainly from eukaryotes; cd24132"
                     /db_xref="CDD:466982"
     CDS             1..302
                     /gene="OSGEP"
                     /coded_by="XM_061157668.1:382..1290"
                     /db_xref="GeneID:133066516"
ORIGIN      
        1 mpavlgfegs ankigvgvvr dgkvlanprr tyvtppgtgf lpgdtarhhr avildllqea
       61 lteagltsed idciaytkgh iemgrlitga tnptvlyvsg gntqviayse hryrifgeti
      121 diavgncldr farvlkisnd pspgynieqm akrgkklvel pytvkgmdvs fsgilsfied
      181 vaqrmlatge ctpedlcfsl qetvfamlve iteramahcg sqealivggv gcnvrlqemm
      241 etmcqergar lfatderfci dngamiaqag wemfqaghrt plsesgitqr yrtdevevtw
      301 rd
//
LOCUS       XP_061013652             318 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA-(apurinic or apyrimidinic site) endonuclease [Dama dama].
ACCESSION   XP_061013652
VERSION     XP_061013652.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157669.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..318
                     /product="DNA-(apurinic or apyrimidinic site)
                     endonuclease"
                     /calculated_mol_wt=35423
     Region          62..316
                     /region_name="Ape1-like_AP-endo"
                     /note="Human Ape1-like subfamily of the ExoIII family
                     apurinic/apyrimidinic (AP) endonucleases; cd09087"
                     /db_xref="CDD:197321"
     Site            order(68,70..74,78,96,98,103,127..128,171,174,210,212,222,
                     224,226,229..230,266,268..270,276,278,280,282..283,309)
                     /site_type="active"
                     /db_xref="CDD:197321"
     Site            order(68,70..74,78,96,98,103,127..128,171,174,210,212,222,
                     224,226,229..230,266,268..270,276,278,280,282,309)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197321"
     Site            order(68,96,171,174,210,212,309)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197321"
     Site            order(68,96,171,210,212,283,308..309)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197321"
     Site            order(70,96,308)
                     /site_type="metal-binding"
                     /note="metal binding site A [ion binding]"
                     /db_xref="CDD:197321"
     Site            order(171,174,210,212,230,266,280,282,309)
                     /site_type="other"
                     /note="AP binding site [nucleotide binding]"
                     /db_xref="CDD:197321"
     Site            order(210,212,309)
                     /site_type="metal-binding"
                     /note="metal binding site B [ion binding]"
                     /db_xref="CDD:197321"
     CDS             1..318
                     /gene="APEX1"
                     /coded_by="XM_061157669.1:223..1179"
                     /db_xref="GeneID:133066517"
ORIGIN      
        1 mpkrgkkgav vedaeepkae peakkskaga kknekeavge gavlyedppd qktspsgksa
       61 tlkicswnvd glrawikkkg ldwvkeeapd ilclqetkcs enklpvelqe lsglshqyws
      121 apsdkegysg vgllsrqcpl kvsygigeee hdqegrviva eydafvlvta yvpnagrglv
      181 rleyrqrwde afrkflkgla srkplvlcgd lnvaheeidl rnpkgnkkna gftpqerqgf
      241 gellqavplt dsfrhlypnt ayaytfwtym mnarsknvgw rldyfllsqs llpalcdski
      301 rskalgsdhc pitlylal
//
LOCUS       XP_061013654             318 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA-(apurinic or apyrimidinic site) endonuclease [Dama dama].
ACCESSION   XP_061013654
VERSION     XP_061013654.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157671.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..318
                     /product="DNA-(apurinic or apyrimidinic site)
                     endonuclease"
                     /calculated_mol_wt=35423
     Region          62..316
                     /region_name="Ape1-like_AP-endo"
                     /note="Human Ape1-like subfamily of the ExoIII family
                     apurinic/apyrimidinic (AP) endonucleases; cd09087"
                     /db_xref="CDD:197321"
     Site            order(68,70..74,78,96,98,103,127..128,171,174,210,212,222,
                     224,226,229..230,266,268..270,276,278,280,282..283,309)
                     /site_type="active"
                     /db_xref="CDD:197321"
     Site            order(68,70..74,78,96,98,103,127..128,171,174,210,212,222,
                     224,226,229..230,266,268..270,276,278,280,282,309)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197321"
     Site            order(68,96,171,174,210,212,309)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197321"
     Site            order(68,96,171,210,212,283,308..309)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197321"
     Site            order(70,96,308)
                     /site_type="metal-binding"
                     /note="metal binding site A [ion binding]"
                     /db_xref="CDD:197321"
     Site            order(171,174,210,212,230,266,280,282,309)
                     /site_type="other"
                     /note="AP binding site [nucleotide binding]"
                     /db_xref="CDD:197321"
     Site            order(210,212,309)
                     /site_type="metal-binding"
                     /note="metal binding site B [ion binding]"
                     /db_xref="CDD:197321"
     CDS             1..318
                     /gene="APEX1"
                     /coded_by="XM_061157671.1:142..1098"
                     /db_xref="GeneID:133066517"
ORIGIN      
        1 mpkrgkkgav vedaeepkae peakkskaga kknekeavge gavlyedppd qktspsgksa
       61 tlkicswnvd glrawikkkg ldwvkeeapd ilclqetkcs enklpvelqe lsglshqyws
      121 apsdkegysg vgllsrqcpl kvsygigeee hdqegrviva eydafvlvta yvpnagrglv
      181 rleyrqrwde afrkflkgla srkplvlcgd lnvaheeidl rnpkgnkkna gftpqerqgf
      241 gellqavplt dsfrhlypnt ayaytfwtym mnarsknvgw rldyfllsqs llpalcdski
      301 rskalgsdhc pitlylal
//
LOCUS       XP_061013655             318 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA-(apurinic or apyrimidinic site) endonuclease [Dama dama].
ACCESSION   XP_061013655
VERSION     XP_061013655.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157672.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..318
                     /product="DNA-(apurinic or apyrimidinic site)
                     endonuclease"
                     /calculated_mol_wt=35423
     Region          62..316
                     /region_name="Ape1-like_AP-endo"
                     /note="Human Ape1-like subfamily of the ExoIII family
                     apurinic/apyrimidinic (AP) endonucleases; cd09087"
                     /db_xref="CDD:197321"
     Site            order(68,70..74,78,96,98,103,127..128,171,174,210,212,222,
                     224,226,229..230,266,268..270,276,278,280,282..283,309)
                     /site_type="active"
                     /db_xref="CDD:197321"
     Site            order(68,70..74,78,96,98,103,127..128,171,174,210,212,222,
                     224,226,229..230,266,268..270,276,278,280,282,309)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197321"
     Site            order(68,96,171,174,210,212,309)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197321"
     Site            order(68,96,171,210,212,283,308..309)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197321"
     Site            order(70,96,308)
                     /site_type="metal-binding"
                     /note="metal binding site A [ion binding]"
                     /db_xref="CDD:197321"
     Site            order(171,174,210,212,230,266,280,282,309)
                     /site_type="other"
                     /note="AP binding site [nucleotide binding]"
                     /db_xref="CDD:197321"
     Site            order(210,212,309)
                     /site_type="metal-binding"
                     /note="metal binding site B [ion binding]"
                     /db_xref="CDD:197321"
     CDS             1..318
                     /gene="APEX1"
                     /coded_by="XM_061157672.1:93..1049"
                     /db_xref="GeneID:133066517"
ORIGIN      
        1 mpkrgkkgav vedaeepkae peakkskaga kknekeavge gavlyedppd qktspsgksa
       61 tlkicswnvd glrawikkkg ldwvkeeapd ilclqetkcs enklpvelqe lsglshqyws
      121 apsdkegysg vgllsrqcpl kvsygigeee hdqegrviva eydafvlvta yvpnagrglv
      181 rleyrqrwde afrkflkgla srkplvlcgd lnvaheeidl rnpkgnkkna gftpqerqgf
      241 gellqavplt dsfrhlypnt ayaytfwtym mnarsknvgw rldyfllsqs llpalcdski
      301 rskalgsdhc pitlylal
//
LOCUS       XP_061013656             318 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA-(apurinic or apyrimidinic site) endonuclease [Dama dama].
ACCESSION   XP_061013656
VERSION     XP_061013656.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157673.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..318
                     /product="DNA-(apurinic or apyrimidinic site)
                     endonuclease"
                     /calculated_mol_wt=35423
     Region          62..316
                     /region_name="Ape1-like_AP-endo"
                     /note="Human Ape1-like subfamily of the ExoIII family
                     apurinic/apyrimidinic (AP) endonucleases; cd09087"
                     /db_xref="CDD:197321"
     Site            order(68,70..74,78,96,98,103,127..128,171,174,210,212,222,
                     224,226,229..230,266,268..270,276,278,280,282..283,309)
                     /site_type="active"
                     /db_xref="CDD:197321"
     Site            order(68,70..74,78,96,98,103,127..128,171,174,210,212,222,
                     224,226,229..230,266,268..270,276,278,280,282,309)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197321"
     Site            order(68,96,171,174,210,212,309)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197321"
     Site            order(68,96,171,210,212,283,308..309)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197321"
     Site            order(70,96,308)
                     /site_type="metal-binding"
                     /note="metal binding site A [ion binding]"
                     /db_xref="CDD:197321"
     Site            order(171,174,210,212,230,266,280,282,309)
                     /site_type="other"
                     /note="AP binding site [nucleotide binding]"
                     /db_xref="CDD:197321"
     Site            order(210,212,309)
                     /site_type="metal-binding"
                     /note="metal binding site B [ion binding]"
                     /db_xref="CDD:197321"
     CDS             1..318
                     /gene="APEX1"
                     /coded_by="XM_061157673.1:190..1146"
                     /db_xref="GeneID:133066517"
ORIGIN      
        1 mpkrgkkgav vedaeepkae peakkskaga kknekeavge gavlyedppd qktspsgksa
       61 tlkicswnvd glrawikkkg ldwvkeeapd ilclqetkcs enklpvelqe lsglshqyws
      121 apsdkegysg vgllsrqcpl kvsygigeee hdqegrviva eydafvlvta yvpnagrglv
      181 rleyrqrwde afrkflkgla srkplvlcgd lnvaheeidl rnpkgnkkna gftpqerqgf
      241 gellqavplt dsfrhlypnt ayaytfwtym mnarsknvgw rldyfllsqs llpalcdski
      301 rskalgsdhc pitlylal
//
LOCUS       XP_061013657             284 aa            linear   MAM 02-DEC-2023
DEFINITION  type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase isoform
            X1 [Dama dama].
ACCESSION   XP_061013657
VERSION     XP_061013657.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157674.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..284
                     /product="type 1 phosphatidylinositol 4,5-bisphosphate
                     4-phosphatase isoform X1"
                     /calculated_mol_wt=30022
     Region          4..277
                     /region_name="Tmemb_55A"
                     /note="Transmembrane protein 55A; pfam09788"
                     /db_xref="CDD:462901"
     CDS             1..284
                     /gene="PIP4P1"
                     /coded_by="XM_061157674.1:91..945"
                     /db_xref="GeneID:133066518"
ORIGIN      
        1 maadgerspl lsepidggag gnglvgpggs gagpgggltp sappygagkh appqafppfp
       61 eghpavlpge dpppysplts pdsgsapmit crvcqslinv egkmhqhvvk cgvcneatpi
      121 knappgkkyv rcpcncllic kvtsqriacp rpyckriinl gpvhpgplsp epqpvgvrvi
      181 cghckntflw teftdrtlar cphcrkvssi grryprkrci ccfllgllla vtatglafgt
      241 wkharryggi yaawafvill avlclgraly wacmkvshpv qnfs
//
LOCUS       XP_061013658             277 aa            linear   MAM 02-DEC-2023
DEFINITION  type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase isoform
            X2 [Dama dama].
ACCESSION   XP_061013658
VERSION     XP_061013658.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157675.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..277
                     /product="type 1 phosphatidylinositol 4,5-bisphosphate
                     4-phosphatase isoform X2"
                     /calculated_mol_wt=29307
     Region          4..270
                     /region_name="Tmemb_55A"
                     /note="Transmembrane protein 55A; pfam09788"
                     /db_xref="CDD:462901"
     CDS             1..277
                     /gene="PIP4P1"
                     /coded_by="XM_061157675.1:90..923"
                     /db_xref="GeneID:133066518"
ORIGIN      
        1 maadgerspl lsepidggag gnglvgpggs gagpgggltp sappygaafp pfpeghpavl
       61 pgedpppysp ltspdsgsap mitcrvcqsl invegkmhqh vvkcgvcnea tpiknappgk
      121 kyvrcpcncl lickvtsqri acprpyckri inlgpvhpgp lspepqpvgv rvicghcknt
      181 flwteftdrt larcphcrkv ssigrryprk rciccfllgl llavtatgla fgtwkharry
      241 ggiyaawafv illavlclgr alywacmkvs hpvqnfs
//
LOCUS       XP_061013659             304 aa            linear   MAM 02-DEC-2023
DEFINITION  purine nucleoside phosphorylase [Dama dama].
ACCESSION   XP_061013659
VERSION     XP_061013659.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157676.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..304
                     /product="purine nucleoside phosphorylase"
                     /calculated_mol_wt=33689
     Region          23..290
                     /region_name="PNP-EcPNPII_like"
                     /note="purine nucleoside phosphorylases similar to human
                     PNP and Escherichia coli PNP-II (XapA); cd09009"
                     /db_xref="CDD:350160"
     Site            order(47..48,99,101,103,129..133,210,215..216,221,
                     232..235,257..260,270,272,275)
                     /site_type="active"
                     /db_xref="CDD:350160"
     Site            order(47..48,79,99,101,130..131,235)
                     /site_type="other"
                     /note="phosphate binding site [ion binding]"
                     /db_xref="CDD:350160"
     Site            order(48,101,103,131..133,215..216,232..234,257..258,272,
                     275)
                     /site_type="other"
                     /note="purine nucleoside binding site [chemical binding]"
                     /db_xref="CDD:350160"
     Site            order(102..106,148..154,159..160,162..163,174..180,183,
                     186,190,206,209..220,222..223,225..227,234,241,261,
                     268..270,272)
                     /site_type="other"
                     /note="homotrimer interface [polypeptide binding]"
                     /db_xref="CDD:350160"
     CDS             1..304
                     /gene="PNP"
                     /coded_by="XM_061157676.1:101..1015"
                     /db_xref="GeneID:133066520"
ORIGIN      
        1 mngeghthre gvcgtvengy tyedyqdtak wllsrtehrp qvalicgsgl gglikrltqa
       61 qtfdyseipn fpkstvpghv grlvfgilng racvvmqgrf hmyegyplwk vtfpvrvfrl
      121 mgvetlvvtn aagglnpnfe vgdimlirdh inlpgfsgen plrgpnderf gvrfpamsda
      181 ydrdmrqkah stwkqmgeqr elqegtyvml agpsyetvae chllqklgad avgmstvpev
      241 ivarhcglrv fgfslitnka ildyesqgka nheevleagk qaakkleqfv filmasipls
      301 ehtn
//
LOCUS       XP_061013660             169 aa            linear   MAM 02-DEC-2023
DEFINITION  probable inactive ribonuclease-like protein 12 [Dama dama].
ACCESSION   XP_061013660
VERSION     XP_061013660.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157677.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..169
                     /product="probable inactive ribonuclease-like protein 12"
                     /calculated_mol_wt=19417
     Region          46..165
                     /region_name="RNase_A"
                     /note="RNase A family, or Pancreatic RNases family;
                     includes vertebrate RNase homologs to the bovine
                     pancreatic ribonuclease A (RNase A). Many of these enzymes
                     have special biological activities; for example, some
                     stimulate the development of vascular...; cd00163"
                     /db_xref="CDD:119386"
     Site            order(55,85,89,117,129,165)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:119386"
     Site            order(86,120,131,146,148,150..151,153)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:119386"
     CDS             1..169
                     /gene="RNASE12"
                     /coded_by="XM_061157677.1:727..1236"
                     /db_xref="GeneID:133066521"
ORIGIN      
        1 mlsmratakt kgikpkhvkd liplmilmvi ifllllfwen eldedaaaat leqlhvdypq
       61 sdilirycnh miiqrvikep nntckkehff iherprnins vcnsprkvpc qndgpglcfl
      121 seiefkmtvc kliegtrypa cnyrvftteg fivvtcddmg pskiqrype
//
LOCUS       XP_061013661             157 aa            linear   MAM 02-DEC-2023
DEFINITION  angiogenin isoform X1 [Dama dama].
ACCESSION   XP_061013661
VERSION     XP_061013661.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157678.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..157
                     /product="angiogenin isoform X1"
                     /calculated_mol_wt=17724
     Region          36..153
                     /region_name="RNAse_Pc"
                     /note="Pancreatic ribonuclease; smart00092"
                     /db_xref="CDD:128403"
     Site            order(43..52,59,63,65..67,74,77..82,113,132,146)
                     /site_type="active"
                     /note="dimerization with domain swap [active]"
                     /db_xref="CDD:119387"
     Site            order(47,74,78,102,114,148..149)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:119387"
     Site            order(75,105,116,131,133,135..136,138)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:119387"
     CDS             1..157
                     /gene="ANG"
                     /coded_by="XM_061157678.1:80..553"
                     /db_xref="GeneID:133066523"
ORIGIN      
        1 meskepllee mvvvlsplfl vfmlglgltp valdqddyry rhfltqhyda kpkgrddkyc
       61 nnimqnrglt rpckdtntfi hgnkndikai cedrngepyg gnlrisrsaf qvttckhsgg
      121 ssrppckyra tkssrvivig cengwpvhfd esfipsr
//
LOCUS       XP_061013662             147 aa            linear   MAM 02-DEC-2023
DEFINITION  angiogenin isoform X2 [Dama dama].
ACCESSION   XP_061013662
VERSION     XP_061013662.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157679.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..147
                     /product="angiogenin isoform X2"
                     /calculated_mol_wt=16538
     Region          26..143
                     /region_name="RNAse_Pc"
                     /note="Pancreatic ribonuclease; smart00092"
                     /db_xref="CDD:128403"
     Site            order(33..42,49,53,55..57,64,67..72,103,122,136)
                     /site_type="active"
                     /note="dimerization with domain swap [active]"
                     /db_xref="CDD:119387"
     Site            order(37,64,68,92,104,138..139)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:119387"
     Site            order(65,95,106,121,123,125..126,128)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:119387"
     CDS             1..147
                     /gene="ANG"
                     /coded_by="XM_061157679.1:146..589"
                     /db_xref="GeneID:133066523"
ORIGIN      
        1 mvvvlsplfl vfmlglgltp valdqddyry rhfltqhyda kpkgrddkyc nnimqnrglt
       61 rpckdtntfi hgnkndikai cedrngepyg gnlrisrsaf qvttckhsgg ssrppckyra
      121 tkssrvivig cengwpvhfd esfipsr
//
LOCUS       XP_061013663             147 aa            linear   MAM 02-DEC-2023
DEFINITION  angiogenin isoform X2 [Dama dama].
ACCESSION   XP_061013663
VERSION     XP_061013663.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157680.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..147
                     /product="angiogenin isoform X2"
                     /calculated_mol_wt=16538
     Region          26..143
                     /region_name="RNAse_Pc"
                     /note="Pancreatic ribonuclease; smart00092"
                     /db_xref="CDD:128403"
     Site            order(33..42,49,53,55..57,64,67..72,103,122,136)
                     /site_type="active"
                     /note="dimerization with domain swap [active]"
                     /db_xref="CDD:119387"
     Site            order(37,64,68,92,104,138..139)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:119387"
     Site            order(65,95,106,121,123,125..126,128)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:119387"
     CDS             1..147
                     /gene="ANG"
                     /coded_by="XM_061157680.1:144..587"
                     /db_xref="GeneID:133066523"
ORIGIN      
        1 mvvvlsplfl vfmlglgltp valdqddyry rhfltqhyda kpkgrddkyc nnimqnrglt
       61 rpckdtntfi hgnkndikai cedrngepyg gnlrisrsaf qvttckhsgg ssrppckyra
      121 tkssrvivig cengwpvhfd esfipsr
//
LOCUS       XP_061013664             147 aa            linear   MAM 02-DEC-2023
DEFINITION  ribonuclease 4 [Dama dama].
ACCESSION   XP_061013664
VERSION     XP_061013664.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157681.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..147
                     /product="ribonuclease 4"
                     /calculated_mol_wt=16795
     Region          29..147
                     /region_name="RNAse_Pc"
                     /note="Pancreatic ribonuclease; smart00092"
                     /db_xref="CDD:128403"
     Site            order(36..45,52,56,58..60,68,71..76,107,126,142)
                     /site_type="active"
                     /note="dimerization with domain swap [active]"
                     /db_xref="CDD:119387"
     Site            order(40,68,72,98,108,144..145)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:119387"
     Site            order(69,101,110,125,127,129..130,132)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:119387"
     CDS             1..147
                     /gene="RNASE4"
                     /coded_by="XM_061157681.1:157..600"
                     /db_xref="GeneID:133066524"
ORIGIN      
        1 malqrtqvfl lflllsllgl glvqpsygqd rmyqrflrqh vdpdetggnd gycnlmmqrr
       61 kmtshqckrf ntfihedlwn irsicstani qckngqmnch egvvrvtdcr etgssrapnc
      121 ryrakastrr vviacegnpe vpvhfdk
//
LOCUS       XP_061013666             147 aa            linear   MAM 02-DEC-2023
DEFINITION  ribonuclease 4 [Dama dama].
ACCESSION   XP_061013666
VERSION     XP_061013666.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157683.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..147
                     /product="ribonuclease 4"
                     /calculated_mol_wt=16795
     Region          29..147
                     /region_name="RNAse_Pc"
                     /note="Pancreatic ribonuclease; smart00092"
                     /db_xref="CDD:128403"
     Site            order(36..45,52,56,58..60,68,71..76,107,126,142)
                     /site_type="active"
                     /note="dimerization with domain swap [active]"
                     /db_xref="CDD:119387"
     Site            order(40,68,72,98,108,144..145)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:119387"
     Site            order(69,101,110,125,127,129..130,132)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:119387"
     CDS             1..147
                     /gene="RNASE4"
                     /coded_by="XM_061157683.1:147..590"
                     /db_xref="GeneID:133066524"
ORIGIN      
        1 malqrtqvfl lflllsllgl glvqpsygqd rmyqrflrqh vdpdetggnd gycnlmmqrr
       61 kmtshqckrf ntfihedlwn irsicstani qckngqmnch egvvrvtdcr etgssrapnc
      121 ryrakastrr vviacegnpe vpvhfdk
//
LOCUS       XP_061013667             147 aa            linear   MAM 02-DEC-2023
DEFINITION  ribonuclease 4 [Dama dama].
ACCESSION   XP_061013667
VERSION     XP_061013667.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157684.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..147
                     /product="ribonuclease 4"
                     /calculated_mol_wt=16795
     Region          29..147
                     /region_name="RNAse_Pc"
                     /note="Pancreatic ribonuclease; smart00092"
                     /db_xref="CDD:128403"
     Site            order(36..45,52,56,58..60,68,71..76,107,126,142)
                     /site_type="active"
                     /note="dimerization with domain swap [active]"
                     /db_xref="CDD:119387"
     Site            order(40,68,72,98,108,144..145)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:119387"
     Site            order(69,101,110,125,127,129..130,132)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:119387"
     CDS             1..147
                     /gene="RNASE4"
                     /coded_by="XM_061157684.1:117..560"
                     /db_xref="GeneID:133066524"
ORIGIN      
        1 malqrtqvfl lflllsllgl glvqpsygqd rmyqrflrqh vdpdetggnd gycnlmmqrr
       61 kmtshqckrf ntfihedlwn irsicstani qckngqmnch egvvrvtdcr etgssrapnc
      121 ryrakastrr vviacegnpe vpvhfdk
//
LOCUS       XP_061013668             460 aa            linear   MAM 02-DEC-2023
DEFINITION  methyltransferase-like protein 17, mitochondrial [Dama dama].
ACCESSION   XP_061013668
VERSION     XP_061013668.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157685.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..460
                     /product="methyltransferase-like protein 17,
                     mitochondrial"
                     /calculated_mol_wt=51300
     Region          156..442
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     CDS             1..460
                     /gene="METTL17"
                     /coded_by="XM_061157685.1:240..1622"
                     /db_xref="GeneID:133066526"
ORIGIN      
        1 matargsryl ltigrwrrsf giapqfrala alvpgvshvd nksdflgkrp hrrhpgilql
       61 scvrlpqala daaqlllleg ampnmekqvq vltnylwsrh lpvepeelqr ravllekkil
      121 enadscqtek hqeevlralr rttyhwqkls yneglsrvym aarldggfaa vsrafheiqa
      181 rlpefqphtl mdfgsgtgsv twaahstwgq slreymcvds saamlelaek llkggsgsgi
      241 pcvpgvffrq flpvspkvqf dvvvaafsls elpskadrtd vvqtlwrkts rflvlvengt
      301 kaghsllmda rdlvlngkek spldprpgfv fapcphelpc pqltaskpla csfsqayhpi
      361 pfswnkkpke ekfslvilar gspeaatrwp ritqpvlrrp rhvhcrlccp dgqmqhavit
      421 arrhgrdlyr carvsswgdl lpvitpselp pspaqdapes
//
LOCUS       XP_061013669            1542 aa            linear   MAM 02-DEC-2023
DEFINITION  rho guanine nucleotide exchange factor 40 isoform X1 [Dama dama].
ACCESSION   XP_061013669
VERSION     XP_061013669.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157686.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1542
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1542
                     /product="rho guanine nucleotide exchange factor 40
                     isoform X1"
                     /calculated_mol_wt=167050
     Region          202..>497
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          806..989
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            890..895
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1109..1264
                     /region_name="RhoGEF"
                     /note="RhoGEF domain; pfam00621"
                     /db_xref="CDD:459876"
     Region          1263..1398
                     /region_name="PH_puratrophin-1"
                     /note="Puratrophin-1 pleckstrin homology (PH) domain;
                     cd13242"
                     /db_xref="CDD:270062"
     CDS             1..1542
                     /gene="ARHGEF40"
                     /coded_by="XM_061157686.1:28..4656"
                     /db_xref="GeneID:133066527"
ORIGIN      
        1 mgtetrrrge kggderseee pepvedcvqs tlaalyppfe ataptllgqv fqvvertyre
       61 dalrytldfl vpakhllaki qqeacaqysg flffhegwpl clheqvvvql aalpwqllrp
      121 gdfylqvvps aaqaprlalk clapgggrvq elpvpneaca ylftpewlqg inkdrptgrl
      181 stcllsapsg iqrlpwaeli cprfvhkggl mvghrpstlp pelpsgppgl pspplpeeal
      241 gtrspgdghn apaegpegey vellevtlpm rgspmdaegs pglsrtrtvp trkgaggkgr
      301 hrrhrawmhq kglgprdqdg arppgegsst gaspgsppga evealpeaaa levaeppaet
      361 lgeasescpl rpgevgagpg qgaeglpgtp rrtgkgnrrk kraagrgaln rggdsaplsp
      421 gdkeetshqe tlvslpppne helpgcspvk eehegsgkpe hepreelkpa dekeprsqeg
      481 cgpveesare reqeglslvc maapddpegl lsnplkpspe tvqevkgesi peegppvsis
      541 ddpgiawdlm asgflvltgg vdqsgrallt itppcppeep ppsqdvlsta lhylhsllrp
      601 dlqilglsal ldlrkapplp palipvlsql qdsgdppliq rlllltldep pvelhglqga
      661 ellsegdlkr vakpeelqwd lgghrepsps hwvethqqva rlcrlcrgvl gsirqaieel
      721 eraaesegee vigmpeplqk vladprltel qrdggailmk lrsthsskle gpgpaalyqe
      781 vdeaihqlvr lsnlhvqqqe qrqrshrlqq alqwlsgpge eqlasfavpg dslpalqete
      841 lrfrafsaev qerlaqaret valeedaasq klldvfeqrl eqvesglhra lrlqrffqqa
      901 hewvdegsar lagagpgrea vlaalalrra pepsagtfqe mralaldlgs paalrewgrc
      961 rarcqelerr iqqqlgeeas prgqrrrrad sassggaprg phspspslss lllpsspgpr
     1021 aapshcslap cgedyeeega elgpeaegrp prtvlirgle vtstevvdrt csprehvllg
     1081 raggpegpwg vgtprmerkr sisaqqrlvs elitceqeyv aalsepvppp gpeltpelrg
     1141 twaaalsare rlrsfhrthf lrelqgctah plrigacflr hgdqfslyaq yvkhrhklet
     1201 glaalspptk gtleggphlp ralqqpleql vrygrlleel lreagpepss erqalgaavq
     1261 llqeqeirgr dllaaeavrg ceidlkeqgq llhrdpftvi cgrkkcfrhv flfehlllfs
     1321 klkgpeggse tfvykqafkt admgltenig dsglcfelwf rrrrareayt lqaaspeikl
     1381 kwtssiaqll wrqaahnkel rvqqmvsmgi gnkpfldika lgertlsall tgraartras
     1441 vavssfehag pslpglspga cslparveee awdldvkqia lasppapetl dssgdvspgp
     1501 rnspslqpph pgsstpilss ggilglsrqs htralsdptt pl
//
LOCUS       XP_061013670            1538 aa            linear   MAM 02-DEC-2023
DEFINITION  rho guanine nucleotide exchange factor 40 isoform X2 [Dama dama].
ACCESSION   XP_061013670
VERSION     XP_061013670.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157687.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1538
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1538
                     /product="rho guanine nucleotide exchange factor 40
                     isoform X2"
                     /calculated_mol_wt=166697
     Region          202..>497
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          806..989
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            890..895
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1109..1264
                     /region_name="RhoGEF"
                     /note="RhoGEF domain; pfam00621"
                     /db_xref="CDD:459876"
     Region          1263..1398
                     /region_name="PH_puratrophin-1"
                     /note="Puratrophin-1 pleckstrin homology (PH) domain;
                     cd13242"
                     /db_xref="CDD:270062"
     CDS             1..1538
                     /gene="ARHGEF40"
                     /coded_by="XM_061157687.1:28..4644"
                     /db_xref="GeneID:133066527"
ORIGIN      
        1 mgtetrrrge kggderseee pepvedcvqs tlaalyppfe ataptllgqv fqvvertyre
       61 dalrytldfl vpakhllaki qqeacaqysg flffhegwpl clheqvvvql aalpwqllrp
      121 gdfylqvvps aaqaprlalk clapgggrvq elpvpneaca ylftpewlqg inkdrptgrl
      181 stcllsapsg iqrlpwaeli cprfvhkggl mvghrpstlp pelpsgppgl pspplpeeal
      241 gtrspgdghn apaegpegey vellevtlpm rgspmdaegs pglsrtrtvp trkgaggkgr
      301 hrrhrawmhq kglgprdqdg arppgegsst gaspgsppga evealpeaaa levaeppaet
      361 lgeasescpl rpgevgagpg qgaeglpgtp rrtgkgnrrk kraagrgaln rggdsaplsp
      421 gdkeetshqe tlvslpppne helpgcspvk eehegsgkpe hepreelkpa dekeprsqeg
      481 cgpveesare reqeglslvc maapddpegl lsnplkpspe tvqevkgesi peegppvsis
      541 ddpgiawdlm asgflvltgg vdqsgrallt itppcppeep ppsqdvlsta lhylhsllrp
      601 dlqilglsal ldlrkapplp palipvlsql qdsgdppliq rlllltldep pvelhglqga
      661 ellsegdlkr vakpeelqwd lgghrepsps hwvethqqva rlcrlcrgvl gsirqaieel
      721 eraaesegee vigmpeplqk vladprltel qrdggailmk lrsthsskle gpgpaalyqe
      781 vdeaihqlvr lsnlhvqqqe qrqrshrlqq alqwlsgpge eqlasfavpg dslpalqete
      841 lrfrafsaev qerlaqaret valeedaasq klldvfeqrl eqvesglhra lrlqrffqqa
      901 hewvdegsar lagagpgrea vlaalalrra pepsagtfqe mralaldlgs paalrewgrc
      961 rarcqelerr iqqqlgeeas prgqrrrrad sassggaprg phspspslss lllpsspgpr
     1021 aapshcslap cgedyeeega elgpeaegrp prtvlirgle vtstevvdrt csprehvllg
     1081 raggpegpwg vgtprmerkr sisaqqrlvs elitceqeyv aalsepvppp gpeltpelrg
     1141 twaaalsare rlrsfhrthf lrelqgctah plrigacflr hgdqfslyaq yvkhrhklet
     1201 glaalspptk gtleggphlp ralqqpleql vrygrlleel lreagpepss erqalgaavq
     1261 llqeqeirgr dllaaeavrg ceidlkeqgq llhrdpftvi cgrkkcfrhv flfehlllfs
     1321 klkgpeggse tfvykqafkt admgltenig dsglcfelwf rrrrareayt lqaaspeikl
     1381 kwtssiaqll wrqaahnkel rvqqmvsmgi gnkpfldika lgertlsall tgraartras
     1441 vavssfehag pslpglspga cslparveee awdldvkqia lapetldssg dvspgprnsp
     1501 slqpphpgss tpilssggil glsrqshtra lsdpttpl
//
LOCUS       XP_061013671            1524 aa            linear   MAM 02-DEC-2023
DEFINITION  rho guanine nucleotide exchange factor 40 isoform X3 [Dama dama].
ACCESSION   XP_061013671
VERSION     XP_061013671.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157688.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1524
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1524
                     /product="rho guanine nucleotide exchange factor 40
                     isoform X3"
                     /calculated_mol_wt=165019
     Region          184..>479
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          788..971
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            872..877
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1091..1246
                     /region_name="RhoGEF"
                     /note="RhoGEF domain; pfam00621"
                     /db_xref="CDD:459876"
     Region          1245..1380
                     /region_name="PH_puratrophin-1"
                     /note="Puratrophin-1 pleckstrin homology (PH) domain;
                     cd13242"
                     /db_xref="CDD:270062"
     CDS             1..1524
                     /gene="ARHGEF40"
                     /coded_by="XM_061157688.1:47..4621"
                     /db_xref="GeneID:133066527"
ORIGIN      
        1 mepepvedcv qstlaalypp feataptllg qvfqvverty redalrytld flvpakhlla
       61 kiqqeacaqy sgflffhegw plclheqvvv qlaalpwqll rpgdfylqvv psaaqaprla
      121 lkclapgggr vqelpvpnea caylftpewl qginkdrptg rlstcllsap sgiqrlpwae
      181 licprfvhkg glmvghrpst lppelpsgpp glpspplpee algtrspgdg hnapaegpeg
      241 eyvellevtl pmrgspmdae gspglsrtrt vptrkgaggk grhrrhrawm hqkglgprdq
      301 dgarppgegs stgaspgspp gaevealpea aalevaeppa etlgeasesc plrpgevgag
      361 pgqgaeglpg tprrtgkgnr rkkraagrga lnrggdsapl spgdkeetsh qetlvslppp
      421 nehelpgcsp vkeehegsgk pehepreelk padekeprsq egcgpveesa rereqeglsl
      481 vcmaapddpe gllsnplkps petvqevkge sipeegppvs isddpgiawd lmasgflvlt
      541 ggvdqsgral ltitppcppe epppsqdvls talhylhsll rpdlqilgls alldlrkapp
      601 lppalipvls qlqdsgdppl iqrlllltld eppvelhglq gaellsegdl krvakpeelq
      661 wdlgghreps pshwvethqq varlcrlcrg vlgsirqaie eleraaeseg eevigmpepl
      721 qkvladprlt elqrdggail mklrsthssk legpgpaaly qevdeaihql vrlsnlhvqq
      781 qeqrqrshrl qqalqwlsgp geeqlasfav pgdslpalqe telrfrafsa evqerlaqar
      841 etvaleedaa sqklldvfeq rleqvesglh ralrlqrffq qahewvdegs arlagagpgr
      901 eavlaalalr rapepsagtf qemralaldl gspaalrewg rcrarcqele rriqqqlgee
      961 asprgqrrrr adsassggap rgphspspsl sslllpsspg praapshcsl apcgedyeee
     1021 gaelgpeaeg rpprtvlirg levtstevvd rtcsprehvl lgraggpegp wgvgtprmer
     1081 krsisaqqrl vselitceqe yvaalsepvp ppgpeltpel rgtwaaalsa rerlrsfhrt
     1141 hflrelqgct ahplrigacf lrhgdqfsly aqyvkhrhkl etglaalspp tkgtleggph
     1201 lpralqqple qlvrygrlle ellreagpep sserqalgaa vqllqeqeir grdllaaeav
     1261 rgceidlkeq gqllhrdpft vicgrkkcfr hvflfehlll fsklkgpegg setfvykqaf
     1321 ktadmglten igdsglcfel wfrrrrarea ytlqaaspei klkwtssiaq llwrqaahnk
     1381 elrvqqmvsm gignkpfldi kalgertlsa lltgraartr asvavssfeh agpslpglsp
     1441 gacslparve eeawdldvkq ialasppape tldssgdvsp gprnspslqp phpgsstpil
     1501 ssggilglsr qshtralsdp ttpl
//
LOCUS       XP_061013672            1490 aa            linear   MAM 02-DEC-2023
DEFINITION  rho guanine nucleotide exchange factor 40 isoform X4 [Dama dama].
ACCESSION   XP_061013672
VERSION     XP_061013672.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157689.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1490
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1490
                     /product="rho guanine nucleotide exchange factor 40
                     isoform X4"
                     /calculated_mol_wt=161754
     Region          202..>497
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          806..989
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            890..895
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1109..1264
                     /region_name="RhoGEF"
                     /note="RhoGEF domain; pfam00621"
                     /db_xref="CDD:459876"
     Region          1263..1398
                     /region_name="PH_puratrophin-1"
                     /note="Puratrophin-1 pleckstrin homology (PH) domain;
                     cd13242"
                     /db_xref="CDD:270062"
     CDS             1..1490
                     /gene="ARHGEF40"
                     /coded_by="XM_061157689.1:28..4500"
                     /db_xref="GeneID:133066527"
ORIGIN      
        1 mgtetrrrge kggderseee pepvedcvqs tlaalyppfe ataptllgqv fqvvertyre
       61 dalrytldfl vpakhllaki qqeacaqysg flffhegwpl clheqvvvql aalpwqllrp
      121 gdfylqvvps aaqaprlalk clapgggrvq elpvpneaca ylftpewlqg inkdrptgrl
      181 stcllsapsg iqrlpwaeli cprfvhkggl mvghrpstlp pelpsgppgl pspplpeeal
      241 gtrspgdghn apaegpegey vellevtlpm rgspmdaegs pglsrtrtvp trkgaggkgr
      301 hrrhrawmhq kglgprdqdg arppgegsst gaspgsppga evealpeaaa levaeppaet
      361 lgeasescpl rpgevgagpg qgaeglpgtp rrtgkgnrrk kraagrgaln rggdsaplsp
      421 gdkeetshqe tlvslpppne helpgcspvk eehegsgkpe hepreelkpa dekeprsqeg
      481 cgpveesare reqeglslvc maapddpegl lsnplkpspe tvqevkgesi peegppvsis
      541 ddpgiawdlm asgflvltgg vdqsgrallt itppcppeep ppsqdvlsta lhylhsllrp
      601 dlqilglsal ldlrkapplp palipvlsql qdsgdppliq rlllltldep pvelhglqga
      661 ellsegdlkr vakpeelqwd lgghrepsps hwvethqqva rlcrlcrgvl gsirqaieel
      721 eraaesegee vigmpeplqk vladprltel qrdggailmk lrsthsskle gpgpaalyqe
      781 vdeaihqlvr lsnlhvqqqe qrqrshrlqq alqwlsgpge eqlasfavpg dslpalqete
      841 lrfrafsaev qerlaqaret valeedaasq klldvfeqrl eqvesglhra lrlqrffqqa
      901 hewvdegsar lagagpgrea vlaalalrra pepsagtfqe mralaldlgs paalrewgrc
      961 rarcqelerr iqqqlgeeas prgqrrrrad sassggaprg phspspslss lllpsspgpr
     1021 aapshcslap cgedyeeega elgpeaegrp prtvlirgle vtstevvdrt csprehvllg
     1081 raggpegpwg vgtprmerkr sisaqqrlvs elitceqeyv aalsepvppp gpeltpelrg
     1141 twaaalsare rlrsfhrthf lrelqgctah plrigacflr hgdqfslyaq yvkhrhklet
     1201 glaalspptk gtleggphlp ralqqpleql vrygrlleel lreagpepss erqalgaavq
     1261 llqeqeirgr dllaaeavrg ceidlkeqgq llhrdpftvi cgrkkcfrhv flfehlllfs
     1321 klkgpeggse tfvykqafkt admgltenig dsglcfelwf rrrrareayt lqaaspeikl
     1381 kwtssiaqll wrqaahnkel rvqqmvsmgi gnkpfldika lgertlsall tgrapetlds
     1441 sgdvspgprn spslqpphpg sstpilssgg ilglsrqsht ralsdpttpl
//
LOCUS       XP_061013674            1470 aa            linear   MAM 02-DEC-2023
DEFINITION  rho guanine nucleotide exchange factor 40 isoform X5 [Dama dama].
ACCESSION   XP_061013674
VERSION     XP_061013674.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157691.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1470
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1470
                     /product="rho guanine nucleotide exchange factor 40
                     isoform X5"
                     /calculated_mol_wt=159184
     Region          202..>497
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          <590..1023
                     /region_name="COG3903"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443109"
     Region          806..989
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            890..895
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1109..>1194
                     /region_name="RhoGEF"
                     /note="RhoGEF domain; pfam00621"
                     /db_xref="CDD:459876"
     Region          1211..1326
                     /region_name="PH_puratrophin-1"
                     /note="Puratrophin-1 pleckstrin homology (PH) domain;
                     cd13242"
                     /db_xref="CDD:270062"
     CDS             1..1470
                     /gene="ARHGEF40"
                     /coded_by="XM_061157691.1:28..4440"
                     /db_xref="GeneID:133066527"
ORIGIN      
        1 mgtetrrrge kggderseee pepvedcvqs tlaalyppfe ataptllgqv fqvvertyre
       61 dalrytldfl vpakhllaki qqeacaqysg flffhegwpl clheqvvvql aalpwqllrp
      121 gdfylqvvps aaqaprlalk clapgggrvq elpvpneaca ylftpewlqg inkdrptgrl
      181 stcllsapsg iqrlpwaeli cprfvhkggl mvghrpstlp pelpsgppgl pspplpeeal
      241 gtrspgdghn apaegpegey vellevtlpm rgspmdaegs pglsrtrtvp trkgaggkgr
      301 hrrhrawmhq kglgprdqdg arppgegsst gaspgsppga evealpeaaa levaeppaet
      361 lgeasescpl rpgevgagpg qgaeglpgtp rrtgkgnrrk kraagrgaln rggdsaplsp
      421 gdkeetshqe tlvslpppne helpgcspvk eehegsgkpe hepreelkpa dekeprsqeg
      481 cgpveesare reqeglslvc maapddpegl lsnplkpspe tvqevkgesi peegppvsis
      541 ddpgiawdlm asgflvltgg vdqsgrallt itppcppeep ppsqdvlsta lhylhsllrp
      601 dlqilglsal ldlrkapplp palipvlsql qdsgdppliq rlllltldep pvelhglqga
      661 ellsegdlkr vakpeelqwd lgghrepsps hwvethqqva rlcrlcrgvl gsirqaieel
      721 eraaesegee vigmpeplqk vladprltel qrdggailmk lrsthsskle gpgpaalyqe
      781 vdeaihqlvr lsnlhvqqqe qrqrshrlqq alqwlsgpge eqlasfavpg dslpalqete
      841 lrfrafsaev qerlaqaret valeedaasq klldvfeqrl eqvesglhra lrlqrffqqa
      901 hewvdegsar lagagpgrea vlaalalrra pepsagtfqe mralaldlgs paalrewgrc
      961 rarcqelerr iqqqlgeeas prgqrrrrad sassggaprg phspspslss lllpsspgpr
     1021 aapshcslap cgedyeeega elgpeaegrp prtvlirgle vtstevvdrt csprehvllg
     1081 raggpegpwg vgtprmerkr sisaqqrlvs elitceqeyv aalsepvppp gpeltpelrg
     1141 twaaalsare rlrsfhrthf lrelqgctah plrigacflr hgdqfslyaq yvkhrhklet
     1201 glaalspptk idlkeqgqll hrdpftvicg rkkcfrhvfl fehlllfskl kgpeggsetf
     1261 vykqafktad mgltenigds glcfelwfrr rrareaytlq aaspeiklkw tssiaqllwr
     1321 qaahnkelrv qqmvsmgign kpfldikalg ertlsalltg raartrasva vssfehagps
     1381 lpglspgacs lparveeeaw dldvkqiala sppapetlds sgdvspgprn spslqpphpg
     1441 sstpilssgg ilglsrqsht ralsdpttpl
//
LOCUS       XP_061013675             716 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 219 [Dama dama].
ACCESSION   XP_061013675
VERSION     XP_061013675.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157692.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..716
                     /product="zinc finger protein 219"
                     /calculated_mol_wt=75876
     Region          53..>93
                     /region_name="RPC10"
                     /note="DNA-directed RNA polymerase, subunit RPC12/RpoP,
                     contains C4-type Zn-finger [Transcription]; COG1996"
                     /db_xref="CDD:441599"
     Region          59..79
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          85..107
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          87..107
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(87,90,103,107)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          268..290
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          270..290
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(270,273,286,290)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          296..318
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          298..318
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          494..514
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          494..514
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Site            order(494,497,510,514)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          506..531
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          522..542
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..716
                     /gene="ZNF219"
                     /coded_by="XM_061157692.1:4461..6611"
                     /db_xref="GeneID:133066528"
ORIGIN      
        1 megsrprapv ghlapsppaf dgeldlqrys ngpgvsagsp gmgavgwses ragerrfpcp
       61 vcgkrfrfns ilalhlrahp gaqafqcphc ghraaqrall rshlrthqpe rprspaarll
      121 leleerallr earlgrprss gglqatpate glarpqapss safrcpfckg kfrtaaerer
      181 hlhilhrpwk cglcsfgssq eeellhhslt ahgaperpla aasaapqpqp ppqpeprsvp
      241 epepepesea tpapapaape eppappefrc qvcgqsftqs wflkghmrkh kasfdhacpv
      301 cgrcfkepwf lknhmkvhas klgplrapgp gsgparapqp pdlgllayep lgpalllapa
      361 ptpaerrepp sllgylslra gearpngega epgagrsfgs frplpsalpa rarrhrteep
      421 deeeevveae eetwarsrav gplaslpprp geapghsapa agaqarstat qeengllvgg
      481 arpeggrgat gkdcpfcgks frsahhlkvh lrvhtgerpy kcphcdyagt qsgslkyhlq
      541 rhhreqksga gpgpppeppp psqrgsgqss gakpapqpat wvegrasprp pasggapgsr
      601 rkpaspgrtl rngrggeaep ldlslragpg geagpggalh rclfcpfatg apelmalhlq
      661 vhhsrrargr rapqadaspp yarapsgetp ptppqegeeg pgllrsgeag lggqer
//
LOCUS       XP_061013676             716 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 219 [Dama dama].
ACCESSION   XP_061013676
VERSION     XP_061013676.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157693.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..716
                     /product="zinc finger protein 219"
                     /calculated_mol_wt=75876
     Region          53..>93
                     /region_name="RPC10"
                     /note="DNA-directed RNA polymerase, subunit RPC12/RpoP,
                     contains C4-type Zn-finger [Transcription]; COG1996"
                     /db_xref="CDD:441599"
     Region          59..79
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          85..107
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          87..107
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(87,90,103,107)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          268..290
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          270..290
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(270,273,286,290)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          296..318
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          298..318
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          494..514
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          494..514
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Site            order(494,497,510,514)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          506..531
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          522..542
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..716
                     /gene="ZNF219"
                     /coded_by="XM_061157693.1:141..2291"
                     /db_xref="GeneID:133066528"
ORIGIN      
        1 megsrprapv ghlapsppaf dgeldlqrys ngpgvsagsp gmgavgwses ragerrfpcp
       61 vcgkrfrfns ilalhlrahp gaqafqcphc ghraaqrall rshlrthqpe rprspaarll
      121 leleerallr earlgrprss gglqatpate glarpqapss safrcpfckg kfrtaaerer
      181 hlhilhrpwk cglcsfgssq eeellhhslt ahgaperpla aasaapqpqp ppqpeprsvp
      241 epepepesea tpapapaape eppappefrc qvcgqsftqs wflkghmrkh kasfdhacpv
      301 cgrcfkepwf lknhmkvhas klgplrapgp gsgparapqp pdlgllayep lgpalllapa
      361 ptpaerrepp sllgylslra gearpngega epgagrsfgs frplpsalpa rarrhrteep
      421 deeeevveae eetwarsrav gplaslpprp geapghsapa agaqarstat qeengllvgg
      481 arpeggrgat gkdcpfcgks frsahhlkvh lrvhtgerpy kcphcdyagt qsgslkyhlq
      541 rhhreqksga gpgpppeppp psqrgsgqss gakpapqpat wvegrasprp pasggapgsr
      601 rkpaspgrtl rngrggeaep ldlslragpg geagpggalh rclfcpfatg apelmalhlq
      661 vhhsrrargr rapqadaspp yarapsgetp ptppqegeeg pgllrsgeag lggqer
//
LOCUS       XP_061013677             716 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 219 [Dama dama].
ACCESSION   XP_061013677
VERSION     XP_061013677.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157694.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..716
                     /product="zinc finger protein 219"
                     /calculated_mol_wt=75876
     Region          53..>93
                     /region_name="RPC10"
                     /note="DNA-directed RNA polymerase, subunit RPC12/RpoP,
                     contains C4-type Zn-finger [Transcription]; COG1996"
                     /db_xref="CDD:441599"
     Region          59..79
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          85..107
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          87..107
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(87,90,103,107)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          268..290
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          270..290
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(270,273,286,290)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          296..318
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          298..318
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          494..514
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          494..514
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Site            order(494,497,510,514)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          506..531
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          522..542
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..716
                     /gene="ZNF219"
                     /coded_by="XM_061157694.1:179..2329"
                     /db_xref="GeneID:133066528"
ORIGIN      
        1 megsrprapv ghlapsppaf dgeldlqrys ngpgvsagsp gmgavgwses ragerrfpcp
       61 vcgkrfrfns ilalhlrahp gaqafqcphc ghraaqrall rshlrthqpe rprspaarll
      121 leleerallr earlgrprss gglqatpate glarpqapss safrcpfckg kfrtaaerer
      181 hlhilhrpwk cglcsfgssq eeellhhslt ahgaperpla aasaapqpqp ppqpeprsvp
      241 epepepesea tpapapaape eppappefrc qvcgqsftqs wflkghmrkh kasfdhacpv
      301 cgrcfkepwf lknhmkvhas klgplrapgp gsgparapqp pdlgllayep lgpalllapa
      361 ptpaerrepp sllgylslra gearpngega epgagrsfgs frplpsalpa rarrhrteep
      421 deeeevveae eetwarsrav gplaslpprp geapghsapa agaqarstat qeengllvgg
      481 arpeggrgat gkdcpfcgks frsahhlkvh lrvhtgerpy kcphcdyagt qsgslkyhlq
      541 rhhreqksga gpgpppeppp psqrgsgqss gakpapqpat wvegrasprp pasggapgsr
      601 rkpaspgrtl rngrggeaep ldlslragpg geagpggalh rclfcpfatg apelmalhlq
      661 vhhsrrargr rapqadaspp yarapsgetp ptppqegeeg pgllrsgeag lggqer
//
LOCUS       XP_061013678             716 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 219 [Dama dama].
ACCESSION   XP_061013678
VERSION     XP_061013678.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157695.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..716
                     /product="zinc finger protein 219"
                     /calculated_mol_wt=75876
     Region          53..>93
                     /region_name="RPC10"
                     /note="DNA-directed RNA polymerase, subunit RPC12/RpoP,
                     contains C4-type Zn-finger [Transcription]; COG1996"
                     /db_xref="CDD:441599"
     Region          59..79
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          85..107
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          87..107
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(87,90,103,107)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          268..290
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          270..290
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(270,273,286,290)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          296..318
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          298..318
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          494..514
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          494..514
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Site            order(494,497,510,514)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          506..531
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          522..542
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..716
                     /gene="ZNF219"
                     /coded_by="XM_061157695.1:3605..5755"
                     /db_xref="GeneID:133066528"
ORIGIN      
        1 megsrprapv ghlapsppaf dgeldlqrys ngpgvsagsp gmgavgwses ragerrfpcp
       61 vcgkrfrfns ilalhlrahp gaqafqcphc ghraaqrall rshlrthqpe rprspaarll
      121 leleerallr earlgrprss gglqatpate glarpqapss safrcpfckg kfrtaaerer
      181 hlhilhrpwk cglcsfgssq eeellhhslt ahgaperpla aasaapqpqp ppqpeprsvp
      241 epepepesea tpapapaape eppappefrc qvcgqsftqs wflkghmrkh kasfdhacpv
      301 cgrcfkepwf lknhmkvhas klgplrapgp gsgparapqp pdlgllayep lgpalllapa
      361 ptpaerrepp sllgylslra gearpngega epgagrsfgs frplpsalpa rarrhrteep
      421 deeeevveae eetwarsrav gplaslpprp geapghsapa agaqarstat qeengllvgg
      481 arpeggrgat gkdcpfcgks frsahhlkvh lrvhtgerpy kcphcdyagt qsgslkyhlq
      541 rhhreqksga gpgpppeppp psqrgsgqss gakpapqpat wvegrasprp pasggapgsr
      601 rkpaspgrtl rngrggeaep ldlslragpg geagpggalh rclfcpfatg apelmalhlq
      661 vhhsrrargr rapqadaspp yarapsgetp ptppqegeeg pgllrsgeag lggqer
//
LOCUS       XP_061013679             371 aa            linear   MAM 02-DEC-2023
DEFINITION  protein NDRG2 isoform X1 [Dama dama].
ACCESSION   XP_061013679
VERSION     XP_061013679.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157696.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..371
                     /product="protein NDRG2 isoform X1"
                     /calculated_mol_wt=40582
     Region          40..318
                     /region_name="Ndr"
                     /note="Ndr family; pfam03096"
                     /db_xref="CDD:397285"
     CDS             1..371
                     /gene="NDRG2"
                     /coded_by="XM_061157696.1:159..1274"
                     /db_xref="GeneID:133066529"
ORIGIN      
        1 maelrevqit eekpllpgqa pevakeaela arilldqgqt hsvetpygsv tftvygtpkp
       61 krpailtyhd vglnykscfq plfqfadmqe iiqnfvrvhv dapgmeegap vfplgyqyps
      121 ldqladmipc ilqylnfsti igigvgagay vlsryalnhp dtveglvlin idpnakgwmd
      181 waahkltglt ssisemilgh lfsqeelsgn seliqkyrni iahapnldni elywnsynnr
      241 rdlnfvrggd ntlkcpvmlv vgdqapheda vvecnskldp tqtsflkmad sggqpqltqp
      301 gklteafkyf lqgmgymass cmtrlsrsrt asltsaasid gnrsrsrtls qssesgtlss
      361 gppghtmevs c
//
LOCUS       XP_061013680             371 aa            linear   MAM 02-DEC-2023
DEFINITION  protein NDRG2 isoform X1 [Dama dama].
ACCESSION   XP_061013680
VERSION     XP_061013680.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157697.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..371
                     /product="protein NDRG2 isoform X1"
                     /calculated_mol_wt=40582
     Region          40..318
                     /region_name="Ndr"
                     /note="Ndr family; pfam03096"
                     /db_xref="CDD:397285"
     CDS             1..371
                     /gene="NDRG2"
                     /coded_by="XM_061157697.1:197..1312"
                     /db_xref="GeneID:133066529"
ORIGIN      
        1 maelrevqit eekpllpgqa pevakeaela arilldqgqt hsvetpygsv tftvygtpkp
       61 krpailtyhd vglnykscfq plfqfadmqe iiqnfvrvhv dapgmeegap vfplgyqyps
      121 ldqladmipc ilqylnfsti igigvgagay vlsryalnhp dtveglvlin idpnakgwmd
      181 waahkltglt ssisemilgh lfsqeelsgn seliqkyrni iahapnldni elywnsynnr
      241 rdlnfvrggd ntlkcpvmlv vgdqapheda vvecnskldp tqtsflkmad sggqpqltqp
      301 gklteafkyf lqgmgymass cmtrlsrsrt asltsaasid gnrsrsrtls qssesgtlss
      361 gppghtmevs c
//
LOCUS       XP_061013681             371 aa            linear   MAM 02-DEC-2023
DEFINITION  protein NDRG2 isoform X1 [Dama dama].
ACCESSION   XP_061013681
VERSION     XP_061013681.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157698.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..371
                     /product="protein NDRG2 isoform X1"
                     /calculated_mol_wt=40582
     Region          40..318
                     /region_name="Ndr"
                     /note="Ndr family; pfam03096"
                     /db_xref="CDD:397285"
     CDS             1..371
                     /gene="NDRG2"
                     /coded_by="XM_061157698.1:290..1405"
                     /db_xref="GeneID:133066529"
ORIGIN      
        1 maelrevqit eekpllpgqa pevakeaela arilldqgqt hsvetpygsv tftvygtpkp
       61 krpailtyhd vglnykscfq plfqfadmqe iiqnfvrvhv dapgmeegap vfplgyqyps
      121 ldqladmipc ilqylnfsti igigvgagay vlsryalnhp dtveglvlin idpnakgwmd
      181 waahkltglt ssisemilgh lfsqeelsgn seliqkyrni iahapnldni elywnsynnr
      241 rdlnfvrggd ntlkcpvmlv vgdqapheda vvecnskldp tqtsflkmad sggqpqltqp
      301 gklteafkyf lqgmgymass cmtrlsrsrt asltsaasid gnrsrsrtls qssesgtlss
      361 gppghtmevs c
//
LOCUS       XP_061013682             357 aa            linear   MAM 02-DEC-2023
DEFINITION  protein NDRG2 isoform X2 [Dama dama].
ACCESSION   XP_061013682
VERSION     XP_061013682.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157699.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..357
                     /product="protein NDRG2 isoform X2"
                     /calculated_mol_wt=39073
     Region          26..304
                     /region_name="Ndr"
                     /note="Ndr family; pfam03096"
                     /db_xref="CDD:397285"
     CDS             1..357
                     /gene="NDRG2"
                     /coded_by="XM_061157699.1:159..1232"
                     /db_xref="GeneID:133066529"
ORIGIN      
        1 maelrevqit eekpllpgqa pevakthsve tpygsvtftv ygtpkpkrpa iltyhdvgln
       61 ykscfqplfq fadmqeiiqn fvrvhvdapg meegapvfpl gyqypsldql admipcilqy
      121 lnfstiigig vgagayvlsr yalnhpdtve glvlinidpn akgwmdwaah kltgltssis
      181 emilghlfsq eelsgnseli qkyrniiaha pnldnielyw nsynnrrdln fvrggdntlk
      241 cpvmlvvgdq aphedavvec nskldptqts flkmadsggq pqltqpgklt eafkyflqgm
      301 gymasscmtr lsrsrtaslt saasidgnrs rsrtlsqsse sgtlssgppg htmevsc
//
LOCUS       XP_061013684             311 aa            linear   MAM 02-DEC-2023
DEFINITION  protein NDRG2 isoform X3 [Dama dama].
ACCESSION   XP_061013684
VERSION     XP_061013684.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157701.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..311
                     /product="protein NDRG2 isoform X3"
                     /calculated_mol_wt=33992
     Region          21..258
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
     CDS             1..311
                     /gene="NDRG2"
                     /coded_by="XM_061157701.1:1..936"
                     /db_xref="GeneID:133066529"
ORIGIN      
        1 mappnpngqr ysptmmwdst plfqfadmqe iiqnfvrvhv dapgmeegap vfplgyqyps
       61 ldqladmipc ilqylnfsti igigvgagay vlsryalnhp dtveglvlin idpnakgwmd
      121 waahkltglt ssisemilgh lfsqeelsgn seliqkyrni iahapnldni elywnsynnr
      181 rdlnfvrggd ntlkcpvmlv vgdqapheda vvecnskldp tqtsflkmad sggqpqltqp
      241 gklteafkyf lqgmgymass cmtrlsrsrt asltsaasid gnrsrsrtls qssesgtlss
      301 gppghtmevs c
//
LOCUS       XP_061013685             307 aa            linear   MAM 02-DEC-2023
DEFINITION  heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1 [Dama
            dama].
ACCESSION   XP_061013685
VERSION     XP_061013685.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157702.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..307
                     /product="heterogeneous nuclear ribonucleoproteins C1/C2
                     isoform X1"
                     /calculated_mol_wt=33625
     Region          10..93
                     /region_name="RRM_hnRNPC"
                     /note="RNA recognition motif (RRM) found in vertebrate
                     heterogeneous nuclear ribonucleoprotein C1/C2 (hnRNP
                     C1/C2); cd12603"
                     /db_xref="CDD:410015"
     CDS             1..307
                     /gene="HNRNPC"
                     /coded_by="XM_061157702.1:879..1802"
                     /db_xref="GeneID:133066530"
ORIGIN      
        1 masnvtnktd prsmnsrvfi gnlntlvvkk sdveaifsky gkivgcsvhk gfafvqyvne
       61 rnaraavage dgrmiagqvl dinlaaepkv nrgkagvkrs aaemygsvpe hpspspllss
      121 sfdldydfqr dyydrmysyp arvpppppia ravvpskrqr vsgntsrrgk sgfnsksgqr
      181 gsssksgklk gddlqtikke ltqikqkvds lleslekiek eqskqgvemk ndkseeeqss
      241 sslkkdetnv kmeseggadd saeegdlldd ddnedrgddq lelikddeke aeegeddrds
      301 angedds
//
LOCUS       XP_061013686             307 aa            linear   MAM 02-DEC-2023
DEFINITION  heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1 [Dama
            dama].
ACCESSION   XP_061013686
VERSION     XP_061013686.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157703.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..307
                     /product="heterogeneous nuclear ribonucleoproteins C1/C2
                     isoform X1"
                     /calculated_mol_wt=33625
     Region          10..93
                     /region_name="RRM_hnRNPC"
                     /note="RNA recognition motif (RRM) found in vertebrate
                     heterogeneous nuclear ribonucleoprotein C1/C2 (hnRNP
                     C1/C2); cd12603"
                     /db_xref="CDD:410015"
     CDS             1..307
                     /gene="HNRNPC"
                     /coded_by="XM_061157703.1:924..1847"
                     /db_xref="GeneID:133066530"
ORIGIN      
        1 masnvtnktd prsmnsrvfi gnlntlvvkk sdveaifsky gkivgcsvhk gfafvqyvne
       61 rnaraavage dgrmiagqvl dinlaaepkv nrgkagvkrs aaemygsvpe hpspspllss
      121 sfdldydfqr dyydrmysyp arvpppppia ravvpskrqr vsgntsrrgk sgfnsksgqr
      181 gsssksgklk gddlqtikke ltqikqkvds lleslekiek eqskqgvemk ndkseeeqss
      241 sslkkdetnv kmeseggadd saeegdlldd ddnedrgddq lelikddeke aeegeddrds
      301 angedds
//
LOCUS       XP_061013687             307 aa            linear   MAM 02-DEC-2023
DEFINITION  heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1 [Dama
            dama].
ACCESSION   XP_061013687
VERSION     XP_061013687.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157704.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..307
                     /product="heterogeneous nuclear ribonucleoproteins C1/C2
                     isoform X1"
                     /calculated_mol_wt=33625
     Region          10..93
                     /region_name="RRM_hnRNPC"
                     /note="RNA recognition motif (RRM) found in vertebrate
                     heterogeneous nuclear ribonucleoprotein C1/C2 (hnRNP
                     C1/C2); cd12603"
                     /db_xref="CDD:410015"
     CDS             1..307
                     /gene="HNRNPC"
                     /coded_by="XM_061157704.1:707..1630"
                     /db_xref="GeneID:133066530"
ORIGIN      
        1 masnvtnktd prsmnsrvfi gnlntlvvkk sdveaifsky gkivgcsvhk gfafvqyvne
       61 rnaraavage dgrmiagqvl dinlaaepkv nrgkagvkrs aaemygsvpe hpspspllss
      121 sfdldydfqr dyydrmysyp arvpppppia ravvpskrqr vsgntsrrgk sgfnsksgqr
      181 gsssksgklk gddlqtikke ltqikqkvds lleslekiek eqskqgvemk ndkseeeqss
      241 sslkkdetnv kmeseggadd saeegdlldd ddnedrgddq lelikddeke aeegeddrds
      301 angedds
//
LOCUS       XP_061013688             307 aa            linear   MAM 02-DEC-2023
DEFINITION  heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1 [Dama
            dama].
ACCESSION   XP_061013688
VERSION     XP_061013688.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157705.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..307
                     /product="heterogeneous nuclear ribonucleoproteins C1/C2
                     isoform X1"
                     /calculated_mol_wt=33625
     Region          10..93
                     /region_name="RRM_hnRNPC"
                     /note="RNA recognition motif (RRM) found in vertebrate
                     heterogeneous nuclear ribonucleoprotein C1/C2 (hnRNP
                     C1/C2); cd12603"
                     /db_xref="CDD:410015"
     CDS             1..307
                     /gene="HNRNPC"
                     /coded_by="XM_061157705.1:547..1470"
                     /db_xref="GeneID:133066530"
ORIGIN      
        1 masnvtnktd prsmnsrvfi gnlntlvvkk sdveaifsky gkivgcsvhk gfafvqyvne
       61 rnaraavage dgrmiagqvl dinlaaepkv nrgkagvkrs aaemygsvpe hpspspllss
      121 sfdldydfqr dyydrmysyp arvpppppia ravvpskrqr vsgntsrrgk sgfnsksgqr
      181 gsssksgklk gddlqtikke ltqikqkvds lleslekiek eqskqgvemk ndkseeeqss
      241 sslkkdetnv kmeseggadd saeegdlldd ddnedrgddq lelikddeke aeegeddrds
      301 angedds
//
LOCUS       XP_061013689             307 aa            linear   MAM 02-DEC-2023
DEFINITION  heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1 [Dama
            dama].
ACCESSION   XP_061013689
VERSION     XP_061013689.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157706.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..307
                     /product="heterogeneous nuclear ribonucleoproteins C1/C2
                     isoform X1"
                     /calculated_mol_wt=33625
     Region          10..93
                     /region_name="RRM_hnRNPC"
                     /note="RNA recognition motif (RRM) found in vertebrate
                     heterogeneous nuclear ribonucleoprotein C1/C2 (hnRNP
                     C1/C2); cd12603"
                     /db_xref="CDD:410015"
     CDS             1..307
                     /gene="HNRNPC"
                     /coded_by="XM_061157706.1:886..1809"
                     /db_xref="GeneID:133066530"
ORIGIN      
        1 masnvtnktd prsmnsrvfi gnlntlvvkk sdveaifsky gkivgcsvhk gfafvqyvne
       61 rnaraavage dgrmiagqvl dinlaaepkv nrgkagvkrs aaemygsvpe hpspspllss
      121 sfdldydfqr dyydrmysyp arvpppppia ravvpskrqr vsgntsrrgk sgfnsksgqr
      181 gsssksgklk gddlqtikke ltqikqkvds lleslekiek eqskqgvemk ndkseeeqss
      241 sslkkdetnv kmeseggadd saeegdlldd ddnedrgddq lelikddeke aeegeddrds
      301 angedds
//
LOCUS       XP_061013690             307 aa            linear   MAM 02-DEC-2023
DEFINITION  heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1 [Dama
            dama].
ACCESSION   XP_061013690
VERSION     XP_061013690.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157707.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..307
                     /product="heterogeneous nuclear ribonucleoproteins C1/C2
                     isoform X1"
                     /calculated_mol_wt=33625
     Region          10..93
                     /region_name="RRM_hnRNPC"
                     /note="RNA recognition motif (RRM) found in vertebrate
                     heterogeneous nuclear ribonucleoprotein C1/C2 (hnRNP
                     C1/C2); cd12603"
                     /db_xref="CDD:410015"
     CDS             1..307
                     /gene="HNRNPC"
                     /coded_by="XM_061157707.1:375..1298"
                     /db_xref="GeneID:133066530"
ORIGIN      
        1 masnvtnktd prsmnsrvfi gnlntlvvkk sdveaifsky gkivgcsvhk gfafvqyvne
       61 rnaraavage dgrmiagqvl dinlaaepkv nrgkagvkrs aaemygsvpe hpspspllss
      121 sfdldydfqr dyydrmysyp arvpppppia ravvpskrqr vsgntsrrgk sgfnsksgqr
      181 gsssksgklk gddlqtikke ltqikqkvds lleslekiek eqskqgvemk ndkseeeqss
      241 sslkkdetnv kmeseggadd saeegdlldd ddnedrgddq lelikddeke aeegeddrds
      301 angedds
//
LOCUS       XP_061013691             307 aa            linear   MAM 02-DEC-2023
DEFINITION  heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1 [Dama
            dama].
ACCESSION   XP_061013691
VERSION     XP_061013691.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157708.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..307
                     /product="heterogeneous nuclear ribonucleoproteins C1/C2
                     isoform X1"
                     /calculated_mol_wt=33625
     Region          10..93
                     /region_name="RRM_hnRNPC"
                     /note="RNA recognition motif (RRM) found in vertebrate
                     heterogeneous nuclear ribonucleoprotein C1/C2 (hnRNP
                     C1/C2); cd12603"
                     /db_xref="CDD:410015"
     CDS             1..307
                     /gene="HNRNPC"
                     /coded_by="XM_061157708.1:185..1108"
                     /db_xref="GeneID:133066530"
ORIGIN      
        1 masnvtnktd prsmnsrvfi gnlntlvvkk sdveaifsky gkivgcsvhk gfafvqyvne
       61 rnaraavage dgrmiagqvl dinlaaepkv nrgkagvkrs aaemygsvpe hpspspllss
      121 sfdldydfqr dyydrmysyp arvpppppia ravvpskrqr vsgntsrrgk sgfnsksgqr
      181 gsssksgklk gddlqtikke ltqikqkvds lleslekiek eqskqgvemk ndkseeeqss
      241 sslkkdetnv kmeseggadd saeegdlldd ddnedrgddq lelikddeke aeegeddrds
      301 angedds
//
LOCUS       XP_061013692             307 aa            linear   MAM 02-DEC-2023
DEFINITION  heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1 [Dama
            dama].
ACCESSION   XP_061013692
VERSION     XP_061013692.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157709.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..307
                     /product="heterogeneous nuclear ribonucleoproteins C1/C2
                     isoform X1"
                     /calculated_mol_wt=33625
     Region          10..93
                     /region_name="RRM_hnRNPC"
                     /note="RNA recognition motif (RRM) found in vertebrate
                     heterogeneous nuclear ribonucleoprotein C1/C2 (hnRNP
                     C1/C2); cd12603"
                     /db_xref="CDD:410015"
     CDS             1..307
                     /gene="HNRNPC"
                     /coded_by="XM_061157709.1:207..1130"
                     /db_xref="GeneID:133066530"
ORIGIN      
        1 masnvtnktd prsmnsrvfi gnlntlvvkk sdveaifsky gkivgcsvhk gfafvqyvne
       61 rnaraavage dgrmiagqvl dinlaaepkv nrgkagvkrs aaemygsvpe hpspspllss
      121 sfdldydfqr dyydrmysyp arvpppppia ravvpskrqr vsgntsrrgk sgfnsksgqr
      181 gsssksgklk gddlqtikke ltqikqkvds lleslekiek eqskqgvemk ndkseeeqss
      241 sslkkdetnv kmeseggadd saeegdlldd ddnedrgddq lelikddeke aeegeddrds
      301 angedds
//
LOCUS       XP_061013693             306 aa            linear   MAM 02-DEC-2023
DEFINITION  heterogeneous nuclear ribonucleoproteins C1/C2 isoform X2 [Dama
            dama].
ACCESSION   XP_061013693
VERSION     XP_061013693.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157710.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..306
                     /product="heterogeneous nuclear ribonucleoproteins C1/C2
                     isoform X2"
                     /calculated_mol_wt=33526
     Region          10..93
                     /region_name="RRM_hnRNPC"
                     /note="RNA recognition motif (RRM) found in vertebrate
                     heterogeneous nuclear ribonucleoprotein C1/C2 (hnRNP
                     C1/C2); cd12603"
                     /db_xref="CDD:410015"
     CDS             1..306
                     /gene="HNRNPC"
                     /coded_by="XM_061157710.1:879..1799"
                     /db_xref="GeneID:133066530"
ORIGIN      
        1 masnvtnktd prsmnsrvfi gnlntlvvkk sdveaifsky gkivgcsvhk gfafvqyvne
       61 rnaraavage dgrmiagqvl dinlaaepkv nrgkagvkrs aaemygsvpe hpspspllss
      121 sfdldydfqr dyydrmysyp arvpppppia ravvpskrqr vsgntsrrgk sgfnsksgqr
      181 gsssksgklk gddlqtikke ltqikqkvds lleslekiek eqskqgemkn dkseeeqsss
      241 slkkdetnvk meseggadds aeegdllddd dnedrgddql elikddekea eegeddrdsa
      301 ngedds
//
LOCUS       XP_061013695             294 aa            linear   MAM 02-DEC-2023
DEFINITION  heterogeneous nuclear ribonucleoproteins C1/C2 isoform X3 [Dama
            dama].
ACCESSION   XP_061013695
VERSION     XP_061013695.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157712.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..294
                     /product="heterogeneous nuclear ribonucleoproteins C1/C2
                     isoform X3"
                     /calculated_mol_wt=32297
     Region          10..93
                     /region_name="RRM_hnRNPC"
                     /note="RNA recognition motif (RRM) found in vertebrate
                     heterogeneous nuclear ribonucleoprotein C1/C2 (hnRNP
                     C1/C2); cd12603"
                     /db_xref="CDD:410015"
     CDS             1..294
                     /gene="HNRNPC"
                     /coded_by="XM_061157712.1:879..1763"
                     /db_xref="GeneID:133066530"
ORIGIN      
        1 masnvtnktd prsmnsrvfi gnlntlvvkk sdveaifsky gkivgcsvhk gfafvqyvne
       61 rnaraavage dgrmiagqvl dinlaaepkv nrgkagvkrs aaemygssfd ldydfqrdyy
      121 drmysyparv pppppiarav vpskrqrvsg ntsrrgksgf nsksgqrgss sksgklkgdd
      181 lqtikkeltq ikqkvdslle slekiekeqs kqgvemkndk seeeqssssl kkdetnvkme
      241 seggaddsae egdllddddn edrgddqlel ikddekeaee geddrdsang edds
//
LOCUS       XP_061013696             293 aa            linear   MAM 02-DEC-2023
DEFINITION  heterogeneous nuclear ribonucleoproteins C1/C2 isoform X4 [Dama
            dama].
ACCESSION   XP_061013696
VERSION     XP_061013696.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157713.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..293
                     /product="heterogeneous nuclear ribonucleoproteins C1/C2
                     isoform X4"
                     /calculated_mol_wt=32197
     Region          10..93
                     /region_name="RRM_hnRNPC"
                     /note="RNA recognition motif (RRM) found in vertebrate
                     heterogeneous nuclear ribonucleoprotein C1/C2 (hnRNP
                     C1/C2); cd12603"
                     /db_xref="CDD:410015"
     CDS             1..293
                     /gene="HNRNPC"
                     /coded_by="XM_061157713.1:879..1760"
                     /db_xref="GeneID:133066530"
ORIGIN      
        1 masnvtnktd prsmnsrvfi gnlntlvvkk sdveaifsky gkivgcsvhk gfafvqyvne
       61 rnaraavage dgrmiagqvl dinlaaepkv nrgkagvkrs aaemygssfd ldydfqrdyy
      121 drmysyparv pppppiarav vpskrqrvsg ntsrrgksgf nsksgqrgss sksgklkgdd
      181 lqtikkeltq ikqkvdslle slekiekeqs kqgemkndks eeeqsssslk kdetnvkmes
      241 eggaddsaee gdllddddne drgddqleli kddekeaeeg eddrdsange dds
//
LOCUS       XP_061013697             204 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 253 isoform X1 [Dama dama].
ACCESSION   XP_061013697
VERSION     XP_061013697.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157714.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..204
                     /product="transmembrane protein 253 isoform X1"
                     /calculated_mol_wt=22251
     CDS             1..204
                     /gene="TMEM253"
                     /coded_by="XM_061157714.1:194..808"
                     /db_xref="GeneID:133066531"
ORIGIN      
        1 medragqqer pslrleklqh warhrqsgrl lvlavsqlwl avavlpfavs vaclnsachm
       61 ttalplgpgi lglltgivtl elrraprlwk vrammifntf nlisgfialv vevtktalms
      121 aptvssqvql agllmlelsa eaftlggvlv sayalfllsq rkprccrsqs lryqelqegl
      181 seleevpele tgptvastak rtne
//
LOCUS       XP_061013698             202 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 253 isoform X2 [Dama dama].
ACCESSION   XP_061013698
VERSION     XP_061013698.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157715.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..202
                     /product="transmembrane protein 253 isoform X2"
                     /calculated_mol_wt=22024
     CDS             1..202
                     /gene="TMEM253"
                     /coded_by="XM_061157715.1:194..802"
                     /db_xref="GeneID:133066531"
ORIGIN      
        1 medragqqer pslrleklqh warhrqsgrl lvlavsqlwl avavlpfavs vaclnsachm
       61 ttalplgpgi lglltgivtl elrraprlwk vrammifntf nlisgfialv vevtktalms
      121 aptvssqlag llmlelsaea ftlggvlvsa yalfllsqrk prccrsqslr yqelqeglse
      181 leevpeletg ptvastakrt ne
//
LOCUS       XP_061013699             165 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 253 isoform X3 [Dama dama].
ACCESSION   XP_061013699
VERSION     XP_061013699.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157716.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..165
                     /product="transmembrane protein 253 isoform X3"
                     /calculated_mol_wt=18053
     CDS             1..165
                     /gene="TMEM253"
                     /coded_by="XM_061157716.1:194..691"
                     /db_xref="GeneID:133066531"
ORIGIN      
        1 medragqqer pslrleklqh warhrqsgrl lvlavsqlwl avavlpfavs vaclnsachm
       61 ttalplgpgi lglltgivtl elrraprlwk lagllmlels aeaftlggvl vsayalflls
      121 qrkprccrsq slryqelqeg lseleevpel etgptvasta krtne
//
LOCUS       XP_061013700             206 aa            linear   MAM 02-DEC-2023
DEFINITION  tubulin polymerization-promoting protein family member 2 [Dama
            dama].
ACCESSION   XP_061013700
VERSION     XP_061013700.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157717.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..206
                     /product="tubulin polymerization-promoting protein family
                     member 2"
                     /calculated_mol_wt=22421
     Region          41..196
                     /region_name="p25-alpha"
                     /note="pfam05517"
                     /db_xref="CDD:461670"
     CDS             1..206
                     /gene="TPPP2"
                     /coded_by="XM_061157717.1:339..959"
                     /db_xref="GeneID:133066532"
ORIGIN      
        1 mepncefsky fqssppllph pqvspltvlp hlqltmasea ertfqrfavf gessssgtem
       61 nnknfsklck dcgimdgkmv tstdvdivfs kvkaknarti tfqqfqeamk elgqkrfkgk
      121 spdealeniy klmegkdpat tgvtkattvg gvsrltdtsk ytgthkerfd esgkgkgiag
      181 redvtdnsgy vsgykgagty dkkgsn
//
LOCUS       XP_061013701             206 aa            linear   MAM 02-DEC-2023
DEFINITION  tubulin polymerization-promoting protein family member 2 [Dama
            dama].
ACCESSION   XP_061013701
VERSION     XP_061013701.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157718.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..206
                     /product="tubulin polymerization-promoting protein family
                     member 2"
                     /calculated_mol_wt=22421
     Region          41..196
                     /region_name="p25-alpha"
                     /note="pfam05517"
                     /db_xref="CDD:461670"
     CDS             1..206
                     /gene="TPPP2"
                     /coded_by="XM_061157718.1:1098..1718"
                     /db_xref="GeneID:133066532"
ORIGIN      
        1 mepncefsky fqssppllph pqvspltvlp hlqltmasea ertfqrfavf gessssgtem
       61 nnknfsklck dcgimdgkmv tstdvdivfs kvkaknarti tfqqfqeamk elgqkrfkgk
      121 spdealeniy klmegkdpat tgvtkattvg gvsrltdtsk ytgthkerfd esgkgkgiag
      181 redvtdnsgy vsgykgagty dkkgsn
//
LOCUS       XP_061013702             153 aa            linear   MAM 02-DEC-2023
DEFINITION  probable inactive ribonuclease-like protein 13 [Dama dama].
ACCESSION   XP_061013702
VERSION     XP_061013702.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157719.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..153
                     /product="probable inactive ribonuclease-like protein 13"
                     /calculated_mol_wt=17618
     Region          30..142
                     /region_name="RNase_A"
                     /note="RNase A family, or Pancreatic RNases family;
                     includes vertebrate RNase homologs to the bovine
                     pancreatic ribonuclease A (RNase A). Many of these enzymes
                     have special biological activities; for example, some
                     stimulate the development of vascular...; cd00163"
                     /db_xref="CDD:119386"
     Site            order(70,102,113,128,130,132..133,135)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:119386"
     CDS             1..153
                     /gene="RNASE13"
                     /coded_by="XM_061157719.1:145..606"
                     /db_xref="GeneID:133066533"
ORIGIN      
        1 mappvaqllf lqvvlgpalv enirtqfaik nfrtlhvdyp kvdyakgfqg ycnglmsyvr
       61 grqeswycpk ihyvlhapwt vvwnfckyse sfcenyneyc tltqdsiplt icslytkqpp
      121 tscrynttlt nqrlyllcse kydgapidii gly
//
LOCUS       XP_061013704             153 aa            linear   MAM 02-DEC-2023
DEFINITION  probable inactive ribonuclease-like protein 13 [Dama dama].
ACCESSION   XP_061013704
VERSION     XP_061013704.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157721.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..153
                     /product="probable inactive ribonuclease-like protein 13"
                     /calculated_mol_wt=17618
     Region          30..142
                     /region_name="RNase_A"
                     /note="RNase A family, or Pancreatic RNases family;
                     includes vertebrate RNase homologs to the bovine
                     pancreatic ribonuclease A (RNase A). Many of these enzymes
                     have special biological activities; for example, some
                     stimulate the development of vascular...; cd00163"
                     /db_xref="CDD:119386"
     Site            order(70,102,113,128,130,132..133,135)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:119386"
     CDS             1..153
                     /gene="RNASE13"
                     /coded_by="XM_061157721.1:133..594"
                     /db_xref="GeneID:133066533"
ORIGIN      
        1 mappvaqllf lqvvlgpalv enirtqfaik nfrtlhvdyp kvdyakgfqg ycnglmsyvr
       61 grqeswycpk ihyvlhapwt vvwnfckyse sfcenyneyc tltqdsiplt icslytkqpp
      121 tscrynttlt nqrlyllcse kydgapidii gly
//
LOCUS       XP_061013705            2591 aa            linear   MAM 02-DEC-2023
DEFINITION  chromodomain-helicase-DNA-binding protein 8 isoform X1 [Dama dama].
ACCESSION   XP_061013705
VERSION     XP_061013705.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157722.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2591
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2591
                     /product="chromodomain-helicase-DNA-binding protein 8
                     isoform X1"
                     /calculated_mol_wt=291430
     Region          <68..280
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          638..703
                     /region_name="CD1_tandem_CHD5-9_like"
                     /note="repeat 1 of the paired tandem chromodomains of
                     chromodomain helicase DNA-binding protein 5-9, and similar
                     proteins; cd18668"
                     /db_xref="CDD:349315"
     Site            order(642,672,674..675,679)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349315"
     Region          721..779
                     /region_name="CD2_tandem_CHD5-9_like"
                     /note="repeat 2 of the paired tandem chromodomains of
                     chromodomain helicase DNA-binding protein 5-9, and similar
                     proteins; cd18663"
                     /db_xref="CDD:349310"
     Site            order(746,763)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:349310"
     Region          810..>1409
                     /region_name="PLN03142"
                     /note="Probable chromatin-remodeling complex ATPase chain;
                     Provisional"
                     /db_xref="CDD:215601"
     Region          811..1032
                     /region_name="DEXHc_CHD8"
                     /note="DEAH-box helicase domain of the chromodomain
                     helicase DNA binding protein 8; cd18060"
                     /db_xref="CDD:350818"
     Site            order(838..844,877,948..949)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350818"
     Region          2319..2363
                     /region_name="BRK"
                     /note="domain in transcription and CHROMO domain
                     helicases; smart00592"
                     /db_xref="CDD:197800"
     Region          2388..2428
                     /region_name="BRK"
                     /note="domain in transcription and CHROMO domain
                     helicases; smart00592"
                     /db_xref="CDD:197800"
     CDS             1..2591
                     /gene="CHD8"
                     /coded_by="XM_061157722.1:321..8096"
                     /db_xref="GeneID:133066535"
ORIGIN      
        1 madpimdlfd dpnlfgldsl tddsfnqvtq dpieealglp ssldsldqmn qdggggdvan
       61 ssandlvppp eetaptelpk estapapesl tlhdyttqpv sqeqpaqpvl qtptptpgll
      121 qvsksqeils qgnpfmgvsa tavssnsagg qppqsapkiv ilkappsssv tgahvaqiqa
      181 qgitstaqpl vagtanggkv tftkvltgtp lrpgvsivsg ntvlaakvpg nqatvqrivq
      241 psrpvkqlvl qpvkgsapag npgatgpplk pavtltstpt qgeskritlv lqqpqsggpq
      301 ghrhvvlgsl pgkivlqgnq laaltqakna qgqpakvvti qlqvqqpqqk iqivpqppss
      361 qpqpqqppst qpvtlssvqq aqimgpgqap gqrlsvplkv vlqpqagssq gassglsvvk
      421 vlsasevaal sspassapht ggktgieenr rlehqkkqek anrivaeaia rarargeqni
      481 prvlnedelp svrpeeegek krrkkssger lkeekpkksk tsgtsktkgk sklntitpvv
      541 gkkrkrntss dnsdvevmpa qspredeess iqkrrsnrqv krkkytedld ikitddeeee
      601 evdvtgpvra epalpepvqe pdgetlpsmq ffvenpseed aaivdkvlsm rivkkelpsg
      661 qyteaeeffv kyknysylhc ewatisqlek dkrihqklkr fktkmaqmrh ffhedeepfn
      721 pdyvevdril deshsidkdn gepviyylvk wcslpyedst welkedvdeg kirefkriqs
      781 rhpelkrvnr pqasawkkle lsheyknrnq lreyqlegvn wllfnwynrq ncilademgl
      841 gktiqsiafl qevynvgihg pflviaplst itnwerefnt wtemntivyh gslasrqmiq
      901 qyemyckdsr grlipgaykf dalittfemi lsdcpelrei ewrcviidea hrlknrnckl
      961 ldslkhmdle hkvlltgtpl qntveelfsl lhflepsqfp seseflkdfg dlkteeqvqk
     1021 lqailkpmml rrlkedvekn lapkqetiie veltniqkky yraileknfs flskgaghtn
     1081 mpnllntmme lrkccnhpyl ingaeekilt efreachiip hdfhlqamvr sagklvlidk
     1141 llpklkaggh kvlifsqmvr cldiledyli qrrylyerid grvrgnlrqa aidrfskpds
     1201 drfvfllctr agglginlta adtciifdsd wnpqndlqaq archrigqsk avkvyrlitr
     1261 nsyeremfdk aslklgldka vlqsmsgrdg nitgiqqfsk keiedllrkg ayaaimeedd
     1321 egskfceedi dqillrrttt itiesegkgs tfakasfvas enrtdisldd pnfwqkwakk
     1381 adldmdllns knnlvidtpr vrkqtrhfst lkdddlvefs dlesedderp rsrrhdrhht
     1441 ygrtdcfrve khllvygwgr wrdilshgrf krrmterdve ticrailvyc llhyrgdeni
     1501 kgfiwdlisp aengktkelq nhsvfdvsps pglsipvprg rkgkkvksqs tfdihkadwi
     1561 rkynpdtlfq desykkhlkh qcnkvllrvr mlyylrqevi gdqaekvlgg aiaseidiwf
     1621 pvvdqlevpt twwdseadks lligvfkhgy ekyntmradp alcflekagr pddkaiaaeh
     1681 rvldnfsdiv egvdfdkdce dpeykplqgp pkdqddegdp lmmmdeeisv idgdeaqvtq
     1741 qpghlfwppg saltarlrrl vtayqrsykr eqmkieaaer gdrrrrrcea afklkeiarr
     1801 ekqqrwtrre qtdfyrvvst fgveydpdtm qfhwdrfrtf arldkktdes ltkyfhgfva
     1861 mcrqvcrlpp aagdeppdpn lfiepiteer asrtlyriel lrrlreqvlc hplledrlal
     1921 cqppgpelpk wwepirhdge llrgaarhgv sqtdcnimqd pdfsflaarm nymqnhqaga
     1981 papslsrcst pllhqqytsr tasplplrpd apvekppeet aaqvpslesl tlklehavva
     2041 rsrptpqdye mrvapsdttp lvsrsvppvk ledeedsdse ldlsklspss ssssssssss
     2101 sstdesedek eekltadqsr sklydeesll slpmsqdgfp nedgeqmtpe llllqerqra
     2161 sewpkdrvli nridlvcqav lsgkwpssrr sqemvtggil gpgnhlldsp sltpgeygds
     2221 pvptprsssa asmaeeevsa vttaaaqftr lrrgmdekef tvqikdeegl kltfqkhklm
     2281 angvmgdghp lfhkkkgnrk klvelevecm eepnhldvdl etripvinkv dgtllvgeda
     2341 prraelemwl qghpefavdp rflaymedrr kqkwqrykkn nkaelnclgi epvqtansrn
     2401 gkkghhaetv lnrvlpgpia pdtskkrarr trpdlskmma lmqgggtgsl slhntfqhss
     2461 sglqsvsslg hssatsaslp fmpfvmggaa ssphvdsstm lhhhhhhphp hhhhhhhpgl
     2521 ratgypsspa tttsgtalrl pplqpeeded dededddddl sqgydsserd fsliddpmmp
     2581 ansdssedad d
//
LOCUS       XP_061013706            2591 aa            linear   MAM 02-DEC-2023
DEFINITION  chromodomain-helicase-DNA-binding protein 8 isoform X1 [Dama dama].
ACCESSION   XP_061013706
VERSION     XP_061013706.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157723.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2591
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2591
                     /product="chromodomain-helicase-DNA-binding protein 8
                     isoform X1"
                     /calculated_mol_wt=291430
     Region          <68..280
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          638..703
                     /region_name="CD1_tandem_CHD5-9_like"
                     /note="repeat 1 of the paired tandem chromodomains of
                     chromodomain helicase DNA-binding protein 5-9, and similar
                     proteins; cd18668"
                     /db_xref="CDD:349315"
     Site            order(642,672,674..675,679)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349315"
     Region          721..779
                     /region_name="CD2_tandem_CHD5-9_like"
                     /note="repeat 2 of the paired tandem chromodomains of
                     chromodomain helicase DNA-binding protein 5-9, and similar
                     proteins; cd18663"
                     /db_xref="CDD:349310"
     Site            order(746,763)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:349310"
     Region          810..>1409
                     /region_name="PLN03142"
                     /note="Probable chromatin-remodeling complex ATPase chain;
                     Provisional"
                     /db_xref="CDD:215601"
     Region          811..1032
                     /region_name="DEXHc_CHD8"
                     /note="DEAH-box helicase domain of the chromodomain
                     helicase DNA binding protein 8; cd18060"
                     /db_xref="CDD:350818"
     Site            order(838..844,877,948..949)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350818"
     Region          2319..2363
                     /region_name="BRK"
                     /note="domain in transcription and CHROMO domain
                     helicases; smart00592"
                     /db_xref="CDD:197800"
     Region          2388..2428
                     /region_name="BRK"
                     /note="domain in transcription and CHROMO domain
                     helicases; smart00592"
                     /db_xref="CDD:197800"
     CDS             1..2591
                     /gene="CHD8"
                     /coded_by="XM_061157723.1:306..8081"
                     /db_xref="GeneID:133066535"
ORIGIN      
        1 madpimdlfd dpnlfgldsl tddsfnqvtq dpieealglp ssldsldqmn qdggggdvan
       61 ssandlvppp eetaptelpk estapapesl tlhdyttqpv sqeqpaqpvl qtptptpgll
      121 qvsksqeils qgnpfmgvsa tavssnsagg qppqsapkiv ilkappsssv tgahvaqiqa
      181 qgitstaqpl vagtanggkv tftkvltgtp lrpgvsivsg ntvlaakvpg nqatvqrivq
      241 psrpvkqlvl qpvkgsapag npgatgpplk pavtltstpt qgeskritlv lqqpqsggpq
      301 ghrhvvlgsl pgkivlqgnq laaltqakna qgqpakvvti qlqvqqpqqk iqivpqppss
      361 qpqpqqppst qpvtlssvqq aqimgpgqap gqrlsvplkv vlqpqagssq gassglsvvk
      421 vlsasevaal sspassapht ggktgieenr rlehqkkqek anrivaeaia rarargeqni
      481 prvlnedelp svrpeeegek krrkkssger lkeekpkksk tsgtsktkgk sklntitpvv
      541 gkkrkrntss dnsdvevmpa qspredeess iqkrrsnrqv krkkytedld ikitddeeee
      601 evdvtgpvra epalpepvqe pdgetlpsmq ffvenpseed aaivdkvlsm rivkkelpsg
      661 qyteaeeffv kyknysylhc ewatisqlek dkrihqklkr fktkmaqmrh ffhedeepfn
      721 pdyvevdril deshsidkdn gepviyylvk wcslpyedst welkedvdeg kirefkriqs
      781 rhpelkrvnr pqasawkkle lsheyknrnq lreyqlegvn wllfnwynrq ncilademgl
      841 gktiqsiafl qevynvgihg pflviaplst itnwerefnt wtemntivyh gslasrqmiq
      901 qyemyckdsr grlipgaykf dalittfemi lsdcpelrei ewrcviidea hrlknrnckl
      961 ldslkhmdle hkvlltgtpl qntveelfsl lhflepsqfp seseflkdfg dlkteeqvqk
     1021 lqailkpmml rrlkedvekn lapkqetiie veltniqkky yraileknfs flskgaghtn
     1081 mpnllntmme lrkccnhpyl ingaeekilt efreachiip hdfhlqamvr sagklvlidk
     1141 llpklkaggh kvlifsqmvr cldiledyli qrrylyerid grvrgnlrqa aidrfskpds
     1201 drfvfllctr agglginlta adtciifdsd wnpqndlqaq archrigqsk avkvyrlitr
     1261 nsyeremfdk aslklgldka vlqsmsgrdg nitgiqqfsk keiedllrkg ayaaimeedd
     1321 egskfceedi dqillrrttt itiesegkgs tfakasfvas enrtdisldd pnfwqkwakk
     1381 adldmdllns knnlvidtpr vrkqtrhfst lkdddlvefs dlesedderp rsrrhdrhht
     1441 ygrtdcfrve khllvygwgr wrdilshgrf krrmterdve ticrailvyc llhyrgdeni
     1501 kgfiwdlisp aengktkelq nhsvfdvsps pglsipvprg rkgkkvksqs tfdihkadwi
     1561 rkynpdtlfq desykkhlkh qcnkvllrvr mlyylrqevi gdqaekvlgg aiaseidiwf
     1621 pvvdqlevpt twwdseadks lligvfkhgy ekyntmradp alcflekagr pddkaiaaeh
     1681 rvldnfsdiv egvdfdkdce dpeykplqgp pkdqddegdp lmmmdeeisv idgdeaqvtq
     1741 qpghlfwppg saltarlrrl vtayqrsykr eqmkieaaer gdrrrrrcea afklkeiarr
     1801 ekqqrwtrre qtdfyrvvst fgveydpdtm qfhwdrfrtf arldkktdes ltkyfhgfva
     1861 mcrqvcrlpp aagdeppdpn lfiepiteer asrtlyriel lrrlreqvlc hplledrlal
     1921 cqppgpelpk wwepirhdge llrgaarhgv sqtdcnimqd pdfsflaarm nymqnhqaga
     1981 papslsrcst pllhqqytsr tasplplrpd apvekppeet aaqvpslesl tlklehavva
     2041 rsrptpqdye mrvapsdttp lvsrsvppvk ledeedsdse ldlsklspss ssssssssss
     2101 sstdesedek eekltadqsr sklydeesll slpmsqdgfp nedgeqmtpe llllqerqra
     2161 sewpkdrvli nridlvcqav lsgkwpssrr sqemvtggil gpgnhlldsp sltpgeygds
     2221 pvptprsssa asmaeeevsa vttaaaqftr lrrgmdekef tvqikdeegl kltfqkhklm
     2281 angvmgdghp lfhkkkgnrk klvelevecm eepnhldvdl etripvinkv dgtllvgeda
     2341 prraelemwl qghpefavdp rflaymedrr kqkwqrykkn nkaelnclgi epvqtansrn
     2401 gkkghhaetv lnrvlpgpia pdtskkrarr trpdlskmma lmqgggtgsl slhntfqhss
     2461 sglqsvsslg hssatsaslp fmpfvmggaa ssphvdsstm lhhhhhhphp hhhhhhhpgl
     2521 ratgypsspa tttsgtalrl pplqpeeded dededddddl sqgydsserd fsliddpmmp
     2581 ansdssedad d
//
LOCUS       XP_061013707            2591 aa            linear   MAM 02-DEC-2023
DEFINITION  chromodomain-helicase-DNA-binding protein 8 isoform X1 [Dama dama].
ACCESSION   XP_061013707
VERSION     XP_061013707.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157724.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2591
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2591
                     /product="chromodomain-helicase-DNA-binding protein 8
                     isoform X1"
                     /calculated_mol_wt=291430
     Region          <68..280
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          638..703
                     /region_name="CD1_tandem_CHD5-9_like"
                     /note="repeat 1 of the paired tandem chromodomains of
                     chromodomain helicase DNA-binding protein 5-9, and similar
                     proteins; cd18668"
                     /db_xref="CDD:349315"
     Site            order(642,672,674..675,679)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349315"
     Region          721..779
                     /region_name="CD2_tandem_CHD5-9_like"
                     /note="repeat 2 of the paired tandem chromodomains of
                     chromodomain helicase DNA-binding protein 5-9, and similar
                     proteins; cd18663"
                     /db_xref="CDD:349310"
     Site            order(746,763)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:349310"
     Region          810..>1409
                     /region_name="PLN03142"
                     /note="Probable chromatin-remodeling complex ATPase chain;
                     Provisional"
                     /db_xref="CDD:215601"
     Region          811..1032
                     /region_name="DEXHc_CHD8"
                     /note="DEAH-box helicase domain of the chromodomain
                     helicase DNA binding protein 8; cd18060"
                     /db_xref="CDD:350818"
     Site            order(838..844,877,948..949)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350818"
     Region          2319..2363
                     /region_name="BRK"
                     /note="domain in transcription and CHROMO domain
                     helicases; smart00592"
                     /db_xref="CDD:197800"
     Region          2388..2428
                     /region_name="BRK"
                     /note="domain in transcription and CHROMO domain
                     helicases; smart00592"
                     /db_xref="CDD:197800"
     CDS             1..2591
                     /gene="CHD8"
                     /coded_by="XM_061157724.1:666..8441"
                     /db_xref="GeneID:133066535"
ORIGIN      
        1 madpimdlfd dpnlfgldsl tddsfnqvtq dpieealglp ssldsldqmn qdggggdvan
       61 ssandlvppp eetaptelpk estapapesl tlhdyttqpv sqeqpaqpvl qtptptpgll
      121 qvsksqeils qgnpfmgvsa tavssnsagg qppqsapkiv ilkappsssv tgahvaqiqa
      181 qgitstaqpl vagtanggkv tftkvltgtp lrpgvsivsg ntvlaakvpg nqatvqrivq
      241 psrpvkqlvl qpvkgsapag npgatgpplk pavtltstpt qgeskritlv lqqpqsggpq
      301 ghrhvvlgsl pgkivlqgnq laaltqakna qgqpakvvti qlqvqqpqqk iqivpqppss
      361 qpqpqqppst qpvtlssvqq aqimgpgqap gqrlsvplkv vlqpqagssq gassglsvvk
      421 vlsasevaal sspassapht ggktgieenr rlehqkkqek anrivaeaia rarargeqni
      481 prvlnedelp svrpeeegek krrkkssger lkeekpkksk tsgtsktkgk sklntitpvv
      541 gkkrkrntss dnsdvevmpa qspredeess iqkrrsnrqv krkkytedld ikitddeeee
      601 evdvtgpvra epalpepvqe pdgetlpsmq ffvenpseed aaivdkvlsm rivkkelpsg
      661 qyteaeeffv kyknysylhc ewatisqlek dkrihqklkr fktkmaqmrh ffhedeepfn
      721 pdyvevdril deshsidkdn gepviyylvk wcslpyedst welkedvdeg kirefkriqs
      781 rhpelkrvnr pqasawkkle lsheyknrnq lreyqlegvn wllfnwynrq ncilademgl
      841 gktiqsiafl qevynvgihg pflviaplst itnwerefnt wtemntivyh gslasrqmiq
      901 qyemyckdsr grlipgaykf dalittfemi lsdcpelrei ewrcviidea hrlknrnckl
      961 ldslkhmdle hkvlltgtpl qntveelfsl lhflepsqfp seseflkdfg dlkteeqvqk
     1021 lqailkpmml rrlkedvekn lapkqetiie veltniqkky yraileknfs flskgaghtn
     1081 mpnllntmme lrkccnhpyl ingaeekilt efreachiip hdfhlqamvr sagklvlidk
     1141 llpklkaggh kvlifsqmvr cldiledyli qrrylyerid grvrgnlrqa aidrfskpds
     1201 drfvfllctr agglginlta adtciifdsd wnpqndlqaq archrigqsk avkvyrlitr
     1261 nsyeremfdk aslklgldka vlqsmsgrdg nitgiqqfsk keiedllrkg ayaaimeedd
     1321 egskfceedi dqillrrttt itiesegkgs tfakasfvas enrtdisldd pnfwqkwakk
     1381 adldmdllns knnlvidtpr vrkqtrhfst lkdddlvefs dlesedderp rsrrhdrhht
     1441 ygrtdcfrve khllvygwgr wrdilshgrf krrmterdve ticrailvyc llhyrgdeni
     1501 kgfiwdlisp aengktkelq nhsvfdvsps pglsipvprg rkgkkvksqs tfdihkadwi
     1561 rkynpdtlfq desykkhlkh qcnkvllrvr mlyylrqevi gdqaekvlgg aiaseidiwf
     1621 pvvdqlevpt twwdseadks lligvfkhgy ekyntmradp alcflekagr pddkaiaaeh
     1681 rvldnfsdiv egvdfdkdce dpeykplqgp pkdqddegdp lmmmdeeisv idgdeaqvtq
     1741 qpghlfwppg saltarlrrl vtayqrsykr eqmkieaaer gdrrrrrcea afklkeiarr
     1801 ekqqrwtrre qtdfyrvvst fgveydpdtm qfhwdrfrtf arldkktdes ltkyfhgfva
     1861 mcrqvcrlpp aagdeppdpn lfiepiteer asrtlyriel lrrlreqvlc hplledrlal
     1921 cqppgpelpk wwepirhdge llrgaarhgv sqtdcnimqd pdfsflaarm nymqnhqaga
     1981 papslsrcst pllhqqytsr tasplplrpd apvekppeet aaqvpslesl tlklehavva
     2041 rsrptpqdye mrvapsdttp lvsrsvppvk ledeedsdse ldlsklspss ssssssssss
     2101 sstdesedek eekltadqsr sklydeesll slpmsqdgfp nedgeqmtpe llllqerqra
     2161 sewpkdrvli nridlvcqav lsgkwpssrr sqemvtggil gpgnhlldsp sltpgeygds
     2221 pvptprsssa asmaeeevsa vttaaaqftr lrrgmdekef tvqikdeegl kltfqkhklm
     2281 angvmgdghp lfhkkkgnrk klvelevecm eepnhldvdl etripvinkv dgtllvgeda
     2341 prraelemwl qghpefavdp rflaymedrr kqkwqrykkn nkaelnclgi epvqtansrn
     2401 gkkghhaetv lnrvlpgpia pdtskkrarr trpdlskmma lmqgggtgsl slhntfqhss
     2461 sglqsvsslg hssatsaslp fmpfvmggaa ssphvdsstm lhhhhhhphp hhhhhhhpgl
     2521 ratgypsspa tttsgtalrl pplqpeeded dededddddl sqgydsserd fsliddpmmp
     2581 ansdssedad d
//
LOCUS       XP_061013708            2583 aa            linear   MAM 02-DEC-2023
DEFINITION  chromodomain-helicase-DNA-binding protein 8 isoform X2 [Dama dama].
ACCESSION   XP_061013708
VERSION     XP_061013708.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157725.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2583
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2583
                     /product="chromodomain-helicase-DNA-binding protein 8
                     isoform X2"
                     /calculated_mol_wt=290602
     Region          <68..280
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          638..703
                     /region_name="CD1_tandem_CHD5-9_like"
                     /note="repeat 1 of the paired tandem chromodomains of
                     chromodomain helicase DNA-binding protein 5-9, and similar
                     proteins; cd18668"
                     /db_xref="CDD:349315"
     Site            order(642,672,674..675,679)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349315"
     Region          721..779
                     /region_name="CD2_tandem_CHD5-9_like"
                     /note="repeat 2 of the paired tandem chromodomains of
                     chromodomain helicase DNA-binding protein 5-9, and similar
                     proteins; cd18663"
                     /db_xref="CDD:349310"
     Site            order(746,763)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:349310"
     Region          810..>1409
                     /region_name="PLN03142"
                     /note="Probable chromatin-remodeling complex ATPase chain;
                     Provisional"
                     /db_xref="CDD:215601"
     Region          811..1032
                     /region_name="DEXHc_CHD8"
                     /note="DEAH-box helicase domain of the chromodomain
                     helicase DNA binding protein 8; cd18060"
                     /db_xref="CDD:350818"
     Site            order(838..844,877,948..949)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350818"
     Region          2311..2355
                     /region_name="BRK"
                     /note="domain in transcription and CHROMO domain
                     helicases; smart00592"
                     /db_xref="CDD:197800"
     Region          2380..2420
                     /region_name="BRK"
                     /note="domain in transcription and CHROMO domain
                     helicases; smart00592"
                     /db_xref="CDD:197800"
     CDS             1..2583
                     /gene="CHD8"
                     /coded_by="XM_061157725.1:321..8072"
                     /db_xref="GeneID:133066535"
ORIGIN      
        1 madpimdlfd dpnlfgldsl tddsfnqvtq dpieealglp ssldsldqmn qdggggdvan
       61 ssandlvppp eetaptelpk estapapesl tlhdyttqpv sqeqpaqpvl qtptptpgll
      121 qvsksqeils qgnpfmgvsa tavssnsagg qppqsapkiv ilkappsssv tgahvaqiqa
      181 qgitstaqpl vagtanggkv tftkvltgtp lrpgvsivsg ntvlaakvpg nqatvqrivq
      241 psrpvkqlvl qpvkgsapag npgatgpplk pavtltstpt qgeskritlv lqqpqsggpq
      301 ghrhvvlgsl pgkivlqgnq laaltqakna qgqpakvvti qlqvqqpqqk iqivpqppss
      361 qpqpqqppst qpvtlssvqq aqimgpgqap gqrlsvplkv vlqpqagssq gassglsvvk
      421 vlsasevaal sspassapht ggktgieenr rlehqkkqek anrivaeaia rarargeqni
      481 prvlnedelp svrpeeegek krrkkssger lkeekpkksk tsgtsktkgk sklntitpvv
      541 gkkrkrntss dnsdvevmpa qspredeess iqkrrsnrqv krkkytedld ikitddeeee
      601 evdvtgpvra epalpepvqe pdgetlpsmq ffvenpseed aaivdkvlsm rivkkelpsg
      661 qyteaeeffv kyknysylhc ewatisqlek dkrihqklkr fktkmaqmrh ffhedeepfn
      721 pdyvevdril deshsidkdn gepviyylvk wcslpyedst welkedvdeg kirefkriqs
      781 rhpelkrvnr pqasawkkle lsheyknrnq lreyqlegvn wllfnwynrq ncilademgl
      841 gktiqsiafl qevynvgihg pflviaplst itnwerefnt wtemntivyh gslasrqmiq
      901 qyemyckdsr grlipgaykf dalittfemi lsdcpelrei ewrcviidea hrlknrnckl
      961 ldslkhmdle hkvlltgtpl qntveelfsl lhflepsqfp seseflkdfg dlkteeqvqk
     1021 lqailkpmml rrlkedvekn lapkqetiie veltniqkky yraileknfs flskgaghtn
     1081 mpnllntmme lrkccnhpyl ingaeekilt efreachiip hdfhlqamvr sagklvlidk
     1141 llpklkaggh kvlifsqmvr cldiledyli qrrylyerid grvrgnlrqa aidrfskpds
     1201 drfvfllctr agglginlta adtciifdsd wnpqndlqaq archrigqsk avkvyrlitr
     1261 nsyeremfdk aslklgldka vlqsmsgrdg nitgiqqfsk keiedllrkg ayaaimeedd
     1321 egskfceedi dqillrrttt itiesegkgs tfakasfvas enrtdisldd pnfwqkwakk
     1381 adldmdllns knnlvidtpr vrkqtrhfst lkdddlvefs dlesedderp rsrrhdrhht
     1441 ygrtdcfrve khllvygwgr wrdilshgrf krrmterdve ticrailvyc llhyrgdeni
     1501 kgfiwdlisp aengktkelq nhsglsipvp rgrkgkkvks qstfdihkad wirkynpdtl
     1561 fqdesykkhl khqcnkvllr vrmlyylrqe vigdqaekvl ggaiaseidi wfpvvdqlev
     1621 pttwwdsead kslligvfkh gyekyntmra dpalcfleka grpddkaiaa ehrvldnfsd
     1681 ivegvdfdkd cedpeykplq gppkdqddeg dplmmmdeei svidgdeaqv tqqpghlfwp
     1741 pgsaltarlr rlvtayqrsy kreqmkieaa ergdrrrrrc eaafklkeia rrekqqrwtr
     1801 reqtdfyrvv stfgveydpd tmqfhwdrfr tfarldkktd esltkyfhgf vamcrqvcrl
     1861 ppaagdeppd pnlfiepite erasrtlyri ellrrlreqv lchplledrl alcqppgpel
     1921 pkwwepirhd gellrgaarh gvsqtdcnim qdpdfsflaa rmnymqnhqa gapapslsrc
     1981 stpllhqqyt srtasplplr pdapvekppe etaaqvpsle sltlklehav varsrptpqd
     2041 yemrvapsdt tplvsrsvpp vkledeedsd seldlsklsp ssssssssss sssstdesed
     2101 ekeekltadq srsklydees llslpmsqdg fpnedgeqmt pellllqerq rasewpkdrv
     2161 linridlvcq avlsgkwpss rrsqemvtgg ilgpgnhlld spsltpgeyg dspvptprss
     2221 saasmaeeev savttaaaqf trlrrgmdek eftvqikdee glkltfqkhk lmangvmgdg
     2281 hplfhkkkgn rkklveleve cmeepnhldv dletripvin kvdgtllvge daprraelem
     2341 wlqghpefav dprflaymed rrkqkwqryk knnkaelncl giepvqtans rngkkghhae
     2401 tvlnrvlpgp iapdtskkra rrtrpdlskm malmqgggtg slslhntfqh sssglqsvss
     2461 lghssatsas lpfmpfvmgg aassphvdss tmlhhhhhhp hphhhhhhhp glratgypss
     2521 patttsgtal rlpplqpeed eddededddd dlsqgydsse rdfsliddpm mpansdssed
     2581 add
//
LOCUS       XP_061013709            2563 aa            linear   MAM 02-DEC-2023
DEFINITION  chromodomain-helicase-DNA-binding protein 8 isoform X3 [Dama dama].
ACCESSION   XP_061013709
VERSION     XP_061013709.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157726.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2563
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2563
                     /product="chromodomain-helicase-DNA-binding protein 8
                     isoform X3"
                     /calculated_mol_wt=288171
     Region          <68..280
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          638..703
                     /region_name="CD1_tandem_CHD5-9_like"
                     /note="repeat 1 of the paired tandem chromodomains of
                     chromodomain helicase DNA-binding protein 5-9, and similar
                     proteins; cd18668"
                     /db_xref="CDD:349315"
     Site            order(642,672,674..675,679)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349315"
     Region          <714..751
                     /region_name="CD_CSD"
                     /note="CHROMO (CHRromatin Organization Modifier) domains
                     and chromo shadow domains; cl28914"
                     /db_xref="CDD:475127"
     Region          782..>1381
                     /region_name="PLN03142"
                     /note="Probable chromatin-remodeling complex ATPase chain;
                     Provisional"
                     /db_xref="CDD:215601"
     Region          783..1004
                     /region_name="DEXHc_CHD8"
                     /note="DEAH-box helicase domain of the chromodomain
                     helicase DNA binding protein 8; cd18060"
                     /db_xref="CDD:350818"
     Site            order(810..816,849,920..921)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350818"
     Region          2291..2335
                     /region_name="BRK"
                     /note="domain in transcription and CHROMO domain
                     helicases; smart00592"
                     /db_xref="CDD:197800"
     Region          2360..2400
                     /region_name="BRK"
                     /note="domain in transcription and CHROMO domain
                     helicases; smart00592"
                     /db_xref="CDD:197800"
     CDS             1..2563
                     /gene="CHD8"
                     /coded_by="XM_061157726.1:321..8012"
                     /db_xref="GeneID:133066535"
ORIGIN      
        1 madpimdlfd dpnlfgldsl tddsfnqvtq dpieealglp ssldsldqmn qdggggdvan
       61 ssandlvppp eetaptelpk estapapesl tlhdyttqpv sqeqpaqpvl qtptptpgll
      121 qvsksqeils qgnpfmgvsa tavssnsagg qppqsapkiv ilkappsssv tgahvaqiqa
      181 qgitstaqpl vagtanggkv tftkvltgtp lrpgvsivsg ntvlaakvpg nqatvqrivq
      241 psrpvkqlvl qpvkgsapag npgatgpplk pavtltstpt qgeskritlv lqqpqsggpq
      301 ghrhvvlgsl pgkivlqgnq laaltqakna qgqpakvvti qlqvqqpqqk iqivpqppss
      361 qpqpqqppst qpvtlssvqq aqimgpgqap gqrlsvplkv vlqpqagssq gassglsvvk
      421 vlsasevaal sspassapht ggktgieenr rlehqkkqek anrivaeaia rarargeqni
      481 prvlnedelp svrpeeegek krrkkssger lkeekpkksk tsgtsktkgk sklntitpvv
      541 gkkrkrntss dnsdvevmpa qspredeess iqkrrsnrqv krkkytedld ikitddeeee
      601 evdvtgpvra epalpepvqe pdgetlpsmq ffvenpseed aaivdkvlsm rivkkelpsg
      661 qyteaeeffv kyknysylhc ewatisqlek dkrihqklkr fktkmaqmrh ffhepviyyl
      721 vkwcslpyed stwelkedvd egkirefkri qsrhpelkrv nrpqasawkk lelsheyknr
      781 nqlreyqleg vnwllfnwyn rqnciladem glgktiqsia flqevynvgi hgpflviapl
      841 stitnweref ntwtemntiv yhgslasrqm iqqyemyckd srgrlipgay kfdalittfe
      901 milsdcpelr eiewrcviid eahrlknrnc klldslkhmd lehkvlltgt plqntveelf
      961 sllhflepsq fpseseflkd fgdlkteeqv qklqailkpm mlrrlkedve knlapkqeti
     1021 ieveltniqk kyyrailekn fsflskgagh tnmpnllntm melrkccnhp ylingaeeki
     1081 ltefreachi iphdfhlqam vrsagklvli dkllpklkag ghkvlifsqm vrcldiledy
     1141 liqrrylyer idgrvrgnlr qaaidrfskp dsdrfvfllc tragglginl taadtciifd
     1201 sdwnpqndlq aqarchrigq skavkvyrli trnsyeremf dkaslklgld kavlqsmsgr
     1261 dgnitgiqqf skkeiedllr kgayaaimee ddegskfcee didqillrrt ttitiesegk
     1321 gstfakasfv asenrtdisl ddpnfwqkwa kkadldmdll nsknnlvidt prvrkqtrhf
     1381 stlkdddlve fsdlesedde rprsrrhdrh htygrtdcfr vekhllvygw grwrdilshg
     1441 rfkrrmterd veticrailv ycllhyrgde nikgfiwdli spaengktke lqnhsvfdvs
     1501 pspglsipvp rgrkgkkvks qstfdihkad wirkynpdtl fqdesykkhl khqcnkvllr
     1561 vrmlyylrqe vigdqaekvl ggaiaseidi wfpvvdqlev pttwwdsead kslligvfkh
     1621 gyekyntmra dpalcfleka grpddkaiaa ehrvldnfsd ivegvdfdkd cedpeykplq
     1681 gppkdqddeg dplmmmdeei svidgdeaqv tqqpghlfwp pgsaltarlr rlvtayqrsy
     1741 kreqmkieaa ergdrrrrrc eaafklkeia rrekqqrwtr reqtdfyrvv stfgveydpd
     1801 tmqfhwdrfr tfarldkktd esltkyfhgf vamcrqvcrl ppaagdeppd pnlfiepite
     1861 erasrtlyri ellrrlreqv lchplledrl alcqppgpel pkwwepirhd gellrgaarh
     1921 gvsqtdcnim qdpdfsflaa rmnymqnhqa gapapslsrc stpllhqqyt srtasplplr
     1981 pdapvekppe etaaqvpsle sltlklehav varsrptpqd yemrvapsdt tplvsrsvpp
     2041 vkledeedsd seldlsklsp ssssssssss sssstdesed ekeekltadq srsklydees
     2101 llslpmsqdg fpnedgeqmt pellllqerq rasewpkdrv linridlvcq avlsgkwpss
     2161 rrsqemvtgg ilgpgnhlld spsltpgeyg dspvptprss saasmaeeev savttaaaqf
     2221 trlrrgmdek eftvqikdee glkltfqkhk lmangvmgdg hplfhkkkgn rkklveleve
     2281 cmeepnhldv dletripvin kvdgtllvge daprraelem wlqghpefav dprflaymed
     2341 rrkqkwqryk knnkaelncl giepvqtans rngkkghhae tvlnrvlpgp iapdtskkra
     2401 rrtrpdlskm malmqgggtg slslhntfqh sssglqsvss lghssatsas lpfmpfvmgg
     2461 aassphvdss tmlhhhhhhp hphhhhhhhp glratgypss patttsgtal rlpplqpeed
     2521 eddededddd dlsqgydsse rdfsliddpm mpansdssed add
//
LOCUS       XP_061013710            2531 aa            linear   MAM 02-DEC-2023
DEFINITION  chromodomain-helicase-DNA-binding protein 8 isoform X4 [Dama dama].
ACCESSION   XP_061013710
VERSION     XP_061013710.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157727.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2531
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2531
                     /product="chromodomain-helicase-DNA-binding protein 8
                     isoform X4"
                     /calculated_mol_wt=284594
     Region          <68..280
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          638..703
                     /region_name="CD1_tandem_CHD5-9_like"
                     /note="repeat 1 of the paired tandem chromodomains of
                     chromodomain helicase DNA-binding protein 5-9, and similar
                     proteins; cd18668"
                     /db_xref="CDD:349315"
     Site            order(642,672,674..675,679)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349315"
     Region          721..779
                     /region_name="CD2_tandem_CHD5-9_like"
                     /note="repeat 2 of the paired tandem chromodomains of
                     chromodomain helicase DNA-binding protein 5-9, and similar
                     proteins; cd18663"
                     /db_xref="CDD:349310"
     Site            order(746,763)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:349310"
     Region          810..>1409
                     /region_name="PLN03142"
                     /note="Probable chromatin-remodeling complex ATPase chain;
                     Provisional"
                     /db_xref="CDD:215601"
     Region          811..1032
                     /region_name="DEXHc_CHD8"
                     /note="DEAH-box helicase domain of the chromodomain
                     helicase DNA binding protein 8; cd18060"
                     /db_xref="CDD:350818"
     Site            order(838..844,877,948..949)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350818"
     Region          2328..2368
                     /region_name="BRK"
                     /note="domain in transcription and CHROMO domain
                     helicases; smart00592"
                     /db_xref="CDD:197800"
     CDS             1..2531
                     /gene="CHD8"
                     /coded_by="XM_061157727.1:321..7916"
                     /db_xref="GeneID:133066535"
ORIGIN      
        1 madpimdlfd dpnlfgldsl tddsfnqvtq dpieealglp ssldsldqmn qdggggdvan
       61 ssandlvppp eetaptelpk estapapesl tlhdyttqpv sqeqpaqpvl qtptptpgll
      121 qvsksqeils qgnpfmgvsa tavssnsagg qppqsapkiv ilkappsssv tgahvaqiqa
      181 qgitstaqpl vagtanggkv tftkvltgtp lrpgvsivsg ntvlaakvpg nqatvqrivq
      241 psrpvkqlvl qpvkgsapag npgatgpplk pavtltstpt qgeskritlv lqqpqsggpq
      301 ghrhvvlgsl pgkivlqgnq laaltqakna qgqpakvvti qlqvqqpqqk iqivpqppss
      361 qpqpqqppst qpvtlssvqq aqimgpgqap gqrlsvplkv vlqpqagssq gassglsvvk
      421 vlsasevaal sspassapht ggktgieenr rlehqkkqek anrivaeaia rarargeqni
      481 prvlnedelp svrpeeegek krrkkssger lkeekpkksk tsgtsktkgk sklntitpvv
      541 gkkrkrntss dnsdvevmpa qspredeess iqkrrsnrqv krkkytedld ikitddeeee
      601 evdvtgpvra epalpepvqe pdgetlpsmq ffvenpseed aaivdkvlsm rivkkelpsg
      661 qyteaeeffv kyknysylhc ewatisqlek dkrihqklkr fktkmaqmrh ffhedeepfn
      721 pdyvevdril deshsidkdn gepviyylvk wcslpyedst welkedvdeg kirefkriqs
      781 rhpelkrvnr pqasawkkle lsheyknrnq lreyqlegvn wllfnwynrq ncilademgl
      841 gktiqsiafl qevynvgihg pflviaplst itnwerefnt wtemntivyh gslasrqmiq
      901 qyemyckdsr grlipgaykf dalittfemi lsdcpelrei ewrcviidea hrlknrnckl
      961 ldslkhmdle hkvlltgtpl qntveelfsl lhflepsqfp seseflkdfg dlkteeqvqk
     1021 lqailkpmml rrlkedvekn lapkqetiie veltniqkky yraileknfs flskgaghtn
     1081 mpnllntmme lrkccnhpyl ingaeekilt efreachiip hdfhlqamvr sagklvlidk
     1141 llpklkaggh kvlifsqmvr cldiledyli qrrylyerid grvrgnlrqa aidrfskpds
     1201 drfvfllctr agglginlta adtciifdsd wnpqndlqaq archrigqsk avkvyrlitr
     1261 nsyeremfdk aslklgldka vlqsmsgrdg nitgiqqfsk keiedllrkg ayaaimeedd
     1321 egskfceedi dqillrrttt itiesegkgs tfakasfvas enrtdisldd pnfwqkwakk
     1381 adldmdllns knnlvidtpr vrkqtrhfst lkdddlvefs dlesedderp rsrrhdrhht
     1441 ygrtdcfrve khllvygwgr wrdilshgrf krrmterdve ticrailvyc llhyrgdeni
     1501 kgfiwdlisp aengktkelq nhsvfdvsps pglsipvprg rkgkkvksqs tfdihkadwi
     1561 rkynpdtlfq desykkhlkh qcnkvllrvr mlyylrqevi gdqaekvlgg aiaseidiwf
     1621 pvvdqlevpt twwdseadks lligvfkhgy ekyntmradp alcflekagr pddkaiaaeh
     1681 rvldnfsdiv egvdfdkdce dpeykplqgp pkdqddegdp lmmmdeeisv idgdeaqvtq
     1741 qpghlfwppg saltarlrrl vtayqrsykr eqmkieaaer gdrrrrrcea afklkeiarr
     1801 ekqqrwtrre qtdfyrvvst fgveydpdtm qfhwdrfrtf arldkktdes ltkyfhgfva
     1861 mcrqvcrlpp aagdeppdpn lfiepiteer asrtlyriel lrrlreqvlc hplledrlal
     1921 cqppgpelpk wwepirhdge llrgaarhgv sqtdcnimqd pdfsflaarm nymqnhqaga
     1981 papslsrcst pllhqqytsr tasplplrpd apvekppeet aaqvpslesl tlklehavva
     2041 rsrptpqdye mrvapsdttp lvsrsvppvk ledeedsdse ldlsklspss ssssssssss
     2101 sstdesedek eekltadqsr sklydeesll slpmsqdgfp nedgeqmtpe llllqerqra
     2161 sewpkdrvli nridlvcqav lsgkwpssrr sqemvtggil gpgnhlldsp sltpgeygds
     2221 pvptprsssa asmaeeevsa vttaaaqftr lrrgmdekef tvqikdeegl kltfqkhklm
     2281 angvmgdghp lfhkkkgnrk klveymedrr kqkwqrykkn nkaelnclgi epvqtansrn
     2341 gkkghhaetv lnrvlpgpia pdtskkrarr trpdlskmma lmqgggtgsl slhntfqhss
     2401 sglqsvsslg hssatsaslp fmpfvmggaa ssphvdsstm lhhhhhhphp hhhhhhhpgl
     2461 ratgypsspa tttsgtalrl pplqpeeded dededddddl sqgydsserd fsliddpmmp
     2521 ansdssedad d
//
LOCUS       XP_061013711            2312 aa            linear   MAM 02-DEC-2023
DEFINITION  chromodomain-helicase-DNA-binding protein 8 isoform X5 [Dama dama].
ACCESSION   XP_061013711
VERSION     XP_061013711.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157728.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2312
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2312
                     /product="chromodomain-helicase-DNA-binding protein 8
                     isoform X5"
                     /calculated_mol_wt=263117
     Region          359..424
                     /region_name="CD1_tandem_CHD5-9_like"
                     /note="repeat 1 of the paired tandem chromodomains of
                     chromodomain helicase DNA-binding protein 5-9, and similar
                     proteins; cd18668"
                     /db_xref="CDD:349315"
     Site            order(363,393,395..396,400)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349315"
     Region          442..500
                     /region_name="CD2_tandem_CHD5-9_like"
                     /note="repeat 2 of the paired tandem chromodomains of
                     chromodomain helicase DNA-binding protein 5-9, and similar
                     proteins; cd18663"
                     /db_xref="CDD:349310"
     Site            order(467,484)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:349310"
     Region          531..>1130
                     /region_name="PLN03142"
                     /note="Probable chromatin-remodeling complex ATPase chain;
                     Provisional"
                     /db_xref="CDD:215601"
     Region          532..753
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            order(559..565,669)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     Region          2040..2084
                     /region_name="BRK"
                     /note="domain in transcription and CHROMO domain
                     helicases; smart00592"
                     /db_xref="CDD:197800"
     Region          2109..2149
                     /region_name="BRK"
                     /note="domain in transcription and CHROMO domain
                     helicases; smart00592"
                     /db_xref="CDD:197800"
     CDS             1..2312
                     /gene="CHD8"
                     /coded_by="XM_061157728.1:94..7032"
                     /db_xref="GeneID:133066535"
ORIGIN      
        1 mkgeskritl vlqqpqsggp qghrhvvlgs lpgkivlqgn qlaaltqakn aqgqpakvvt
       61 iqlqvqqpqq kiqivpqpps sqpqpqqpps tqpvtlssvq qaqimgpgqa pgqrlsvplk
      121 vvlqpqagss qgassglsvv kvlsasevaa lsspassaph tggktgieen rrlehqkkqe
      181 kanrivaeai ararargeqn iprvlnedel psvrpeeege kkrrkkssge rlkeekpkks
      241 ktsgtsktkg ksklntitpv vgkkrkrnts sdnsdvevmp aqspredees siqkrrsnrq
      301 vkrkkytedl dikitddeee eevdvtgpvr aepalpepvq epdgetlpsm qffvenpsee
      361 daaivdkvls mrivkkelps gqyteaeeff vkyknysylh cewatisqle kdkrihqklk
      421 rfktkmaqmr hffhedeepf npdyvevdri ldeshsidkd ngepviyylv kwcslpyeds
      481 twelkedvde gkirefkriq srhpelkrvn rpqasawkkl elsheyknrn qlreyqlegv
      541 nwllfnwynr qncilademg lgktiqsiaf lqevynvgih gpflviapls titnwerefn
      601 twtemntivy hgslasrqmi qqyemyckds rgrlipgayk fdalittfem ilsdcpelre
      661 iewrcviide ahrlknrnck lldslkhmdl ehkvlltgtp lqntveelfs llhflepsqf
      721 pseseflkdf gdlkteeqvq klqailkpmm lrrlkedvek nlapkqetii eveltniqkk
      781 yyraileknf sflskgaght nmpnllntmm elrkccnhpy lingaeekil tefreachii
      841 phdfhlqamv rsagklvlid kllpklkagg hkvlifsqmv rcldiledyl iqrrylyeri
      901 dgrvrgnlrq aaidrfskpd sdrfvfllct ragglginlt aadtciifds dwnpqndlqa
      961 qarchrigqs kavkvyrlit rnsyeremfd kaslklgldk avlqsmsgrd gnitgiqqfs
     1021 kkeiedllrk gayaaimeed degskfceed idqillrrtt titiesegkg stfakasfva
     1081 senrtdisld dpnfwqkwak kadldmdlln sknnlvidtp rvrkqtrhfs tlkdddlvef
     1141 sdlesedder prsrrhdrhh tygrtdcfrv ekhllvygwg rwrdilshgr fkrrmterdv
     1201 eticrailvy cllhyrgden ikgfiwdlis paengktkel qnhsvfdvsp spglsipvpr
     1261 grkgkkvksq stfdihkadw irkynpdtlf qdesykkhlk hqcnkvllrv rmlyylrqev
     1321 igdqaekvlg gaiaseidiw fpvvdqlevp ttwwdseadk slligvfkhg yekyntmrad
     1381 palcflekag rpddkaiaae hrvldnfsdi vegvdfdkdc edpeykplqg ppkdqddegd
     1441 plmmmdeeis vidgdeaqvt qqpghlfwpp gsaltarlrr lvtayqrsyk reqmkieaae
     1501 rgdrrrrrce aafklkeiar rekqqrwtrr eqtdfyrvvs tfgveydpdt mqfhwdrfrt
     1561 farldkktde sltkyfhgfv amcrqvcrlp paagdeppdp nlfiepitee rasrtlyrie
     1621 llrrlreqvl chplledrla lcqppgpelp kwwepirhdg ellrgaarhg vsqtdcnimq
     1681 dpdfsflaar mnymqnhqag apapslsrcs tpllhqqyts rtasplplrp dapvekppee
     1741 taaqvpsles ltlklehavv arsrptpqdy emrvapsdtt plvsrsvppv kledeedsds
     1801 eldlsklsps ssssssssss ssstdesede keekltadqs rsklydeesl lslpmsqdgf
     1861 pnedgeqmtp ellllqerqr asewpkdrvl inridlvcqa vlsgkwpssr rsqemvtggi
     1921 lgpgnhllds psltpgeygd spvptprsss aasmaeeevs avttaaaqft rlrrgmdeke
     1981 ftvqikdeeg lkltfqkhkl mangvmgdgh plfhkkkgnr kklvelevec meepnhldvd
     2041 letripvink vdgtllvged aprraelemw lqghpefavd prflaymedr rkqkwqrykk
     2101 nnkaelnclg iepvqtansr ngkkghhaet vlnrvlpgpi apdtskkrar rtrpdlskmm
     2161 almqgggtgs lslhntfqhs ssglqsvssl ghssatsasl pfmpfvmgga assphvdsst
     2221 mlhhhhhhph phhhhhhhpg lratgypssp atttsgtalr lpplqpeede ddededdddd
     2281 lsqgydsser dfsliddpmm pansdsseda dd
//
LOCUS       XP_061013712            2312 aa            linear   MAM 02-DEC-2023
DEFINITION  chromodomain-helicase-DNA-binding protein 8 isoform X5 [Dama dama].
ACCESSION   XP_061013712
VERSION     XP_061013712.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157729.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2312
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2312
                     /product="chromodomain-helicase-DNA-binding protein 8
                     isoform X5"
                     /calculated_mol_wt=263117
     Region          359..424
                     /region_name="CD1_tandem_CHD5-9_like"
                     /note="repeat 1 of the paired tandem chromodomains of
                     chromodomain helicase DNA-binding protein 5-9, and similar
                     proteins; cd18668"
                     /db_xref="CDD:349315"
     Site            order(363,393,395..396,400)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349315"
     Region          442..500
                     /region_name="CD2_tandem_CHD5-9_like"
                     /note="repeat 2 of the paired tandem chromodomains of
                     chromodomain helicase DNA-binding protein 5-9, and similar
                     proteins; cd18663"
                     /db_xref="CDD:349310"
     Site            order(467,484)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:349310"
     Region          531..>1130
                     /region_name="PLN03142"
                     /note="Probable chromatin-remodeling complex ATPase chain;
                     Provisional"
                     /db_xref="CDD:215601"
     Region          532..753
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            order(559..565,669)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     Region          2040..2084
                     /region_name="BRK"
                     /note="domain in transcription and CHROMO domain
                     helicases; smart00592"
                     /db_xref="CDD:197800"
     Region          2109..2149
                     /region_name="BRK"
                     /note="domain in transcription and CHROMO domain
                     helicases; smart00592"
                     /db_xref="CDD:197800"
     CDS             1..2312
                     /gene="CHD8"
                     /coded_by="XM_061157729.1:90..7028"
                     /db_xref="GeneID:133066535"
ORIGIN      
        1 mkgeskritl vlqqpqsggp qghrhvvlgs lpgkivlqgn qlaaltqakn aqgqpakvvt
       61 iqlqvqqpqq kiqivpqpps sqpqpqqpps tqpvtlssvq qaqimgpgqa pgqrlsvplk
      121 vvlqpqagss qgassglsvv kvlsasevaa lsspassaph tggktgieen rrlehqkkqe
      181 kanrivaeai ararargeqn iprvlnedel psvrpeeege kkrrkkssge rlkeekpkks
      241 ktsgtsktkg ksklntitpv vgkkrkrnts sdnsdvevmp aqspredees siqkrrsnrq
      301 vkrkkytedl dikitddeee eevdvtgpvr aepalpepvq epdgetlpsm qffvenpsee
      361 daaivdkvls mrivkkelps gqyteaeeff vkyknysylh cewatisqle kdkrihqklk
      421 rfktkmaqmr hffhedeepf npdyvevdri ldeshsidkd ngepviyylv kwcslpyeds
      481 twelkedvde gkirefkriq srhpelkrvn rpqasawkkl elsheyknrn qlreyqlegv
      541 nwllfnwynr qncilademg lgktiqsiaf lqevynvgih gpflviapls titnwerefn
      601 twtemntivy hgslasrqmi qqyemyckds rgrlipgayk fdalittfem ilsdcpelre
      661 iewrcviide ahrlknrnck lldslkhmdl ehkvlltgtp lqntveelfs llhflepsqf
      721 pseseflkdf gdlkteeqvq klqailkpmm lrrlkedvek nlapkqetii eveltniqkk
      781 yyraileknf sflskgaght nmpnllntmm elrkccnhpy lingaeekil tefreachii
      841 phdfhlqamv rsagklvlid kllpklkagg hkvlifsqmv rcldiledyl iqrrylyeri
      901 dgrvrgnlrq aaidrfskpd sdrfvfllct ragglginlt aadtciifds dwnpqndlqa
      961 qarchrigqs kavkvyrlit rnsyeremfd kaslklgldk avlqsmsgrd gnitgiqqfs
     1021 kkeiedllrk gayaaimeed degskfceed idqillrrtt titiesegkg stfakasfva
     1081 senrtdisld dpnfwqkwak kadldmdlln sknnlvidtp rvrkqtrhfs tlkdddlvef
     1141 sdlesedder prsrrhdrhh tygrtdcfrv ekhllvygwg rwrdilshgr fkrrmterdv
     1201 eticrailvy cllhyrgden ikgfiwdlis paengktkel qnhsvfdvsp spglsipvpr
     1261 grkgkkvksq stfdihkadw irkynpdtlf qdesykkhlk hqcnkvllrv rmlyylrqev
     1321 igdqaekvlg gaiaseidiw fpvvdqlevp ttwwdseadk slligvfkhg yekyntmrad
     1381 palcflekag rpddkaiaae hrvldnfsdi vegvdfdkdc edpeykplqg ppkdqddegd
     1441 plmmmdeeis vidgdeaqvt qqpghlfwpp gsaltarlrr lvtayqrsyk reqmkieaae
     1501 rgdrrrrrce aafklkeiar rekqqrwtrr eqtdfyrvvs tfgveydpdt mqfhwdrfrt
     1561 farldkktde sltkyfhgfv amcrqvcrlp paagdeppdp nlfiepitee rasrtlyrie
     1621 llrrlreqvl chplledrla lcqppgpelp kwwepirhdg ellrgaarhg vsqtdcnimq
     1681 dpdfsflaar mnymqnhqag apapslsrcs tpllhqqyts rtasplplrp dapvekppee
     1741 taaqvpsles ltlklehavv arsrptpqdy emrvapsdtt plvsrsvppv kledeedsds
     1801 eldlsklsps ssssssssss ssstdesede keekltadqs rsklydeesl lslpmsqdgf
     1861 pnedgeqmtp ellllqerqr asewpkdrvl inridlvcqa vlsgkwpssr rsqemvtggi
     1921 lgpgnhllds psltpgeygd spvptprsss aasmaeeevs avttaaaqft rlrrgmdeke
     1981 ftvqikdeeg lkltfqkhkl mangvmgdgh plfhkkkgnr kklvelevec meepnhldvd
     2041 letripvink vdgtllvged aprraelemw lqghpefavd prflaymedr rkqkwqrykk
     2101 nnkaelnclg iepvqtansr ngkkghhaet vlnrvlpgpi apdtskkrar rtrpdlskmm
     2161 almqgggtgs lslhntfqhs ssglqsvssl ghssatsasl pfmpfvmgga assphvdsst
     2221 mlhhhhhhph phhhhhhhpg lratgypssp atttsgtalr lpplqpeede ddededdddd
     2281 lsqgydsser dfsliddpmm pansdsseda dd
//
LOCUS       XP_061013714            1284 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: X-linked retinitis pigmentosa GTPase
            regulator-interacting protein 1 [Dama dama].
ACCESSION   XP_061013714
VERSION     XP_061013714.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157731.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1284
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1284
                     /product="LOW QUALITY PROTEIN: X-linked retinitis
                     pigmentosa GTPase regulator-interacting protein 1"
                     /calculated_mol_wt=146644
     Region          <273..>576
                     /region_name="Mplasa_alph_rch"
                     /note="helix-rich Mycoplasma protein; TIGR04523"
                     /db_xref="CDD:275316"
     Region          624..757
                     /region_name="C2-C2_1"
                     /note="First C2 domain of RPGR-interacting protein 1;
                     pfam11618"
                     /db_xref="CDD:463310"
     Region          801..900
                     /region_name="C2"
                     /note="C2 domain; cd00030"
                     /db_xref="CDD:175973"
     Region          1113..1277
                     /region_name="RPGR1_C"
                     /note="Retinitis pigmentosa G-protein regulator
                     interacting C-terminal; pfam18111"
                     /db_xref="CDD:465655"
     CDS             1..1284
                     /gene="RPGRIP1"
                     /coded_by="XM_061157731.1:556..4410"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 2 bases in 1 codon"
                     /db_xref="GeneID:133066536"
ORIGIN      
        1 mtsylledht akdligdids iplmipaskg kntktqppls rmtrdeleds lfrlreehml
       61 vkerfwkqqd eikrmrtall rltaagrglr aeaaaaepql weparrrrna awrqrplkhq
      121 rpplqglplq vqrvgppapr rtqprvhagh rqlhtagape aekprresrd rlsytapptf
      181 kehvtnekar gevssepsel vpnsnrkisf skviimtkli glcmpnsahf mtsdtmqvee
      241 ppkspekmws kdenfeqrss lestekatel rasikeniql irlkkllher ntslavtkaq
      301 ltevqaayet llhknqgilg aahdallsqv nelraelqee skkavswksq vedvsilqit
      361 lkefqerved lekerkllnd nydkllenml dssnqpqwsh elgeqlqqkv sqlqdqldve
      421 mkekreillq lsqekaqnkd leleltnllq khrqevedlq nistfsqspd rqsapathpa
      481 lfqettqikp cepksqeekk lsqmlselqv shaettlele ktrdmlilqr kinvcyqeel
      541 eammtkadne nkdhkekler lnqlldlknk rinqlegilr shglpvseql kdvaygtrhl
      601 plclkplpah ededkvdisp rhqsenlfel hihqafltsa alaqagdtqp ttfctysfyd
      661 fethctplvv gpqplydfts qyvvetdslf lhylqgasaq lelhqaiase hhtlaagwic
      721 fdrvletver ihgsatltgt ggevfgvley wmrlrfpmrs slqaynkrkk aqaylaanvl
      781 gaweaqkdes rsgtwknqne lrveiiqccg lrsrslgaqp spyvmyrfft fsdhdtpiip
      841 asnnpyfrdl arfpvlvssd ldqylrreal svyvfddedp epgsylgrgq vpllplaqnk
      901 siqgnfnltn pvgepngsvq vqldwgscyi ppesfpkpea qseentrdal etsieeeeas
      961 fppqdqmvsi dspteagqye tkrkppqvge rkerehqvag ysrrkhgrkt giqgknrmey
     1021 lshnllngnt lqqvkyvewk fsglkmstdh vlknqqkeee mtssysaqil ketphpvndk
     1081 efceqasevs eaqttdsdei vtpvsqkcpk agsekmciei vslafypeae vmcdenveqv
     1141 yveykfydlp lsetetpvsl rkprageeih fhfskvidld pveqkerrqf lftmltgqdp
     1201 eqghlkftvv sdpieeetke cqevgyayle lwpilvsgrd ileqdldivs pedqatpigk
     1261 lkvslqaaaa lhaiykemte dlfs
//
LOCUS       XP_061013715            1047 aa            linear   MAM 02-DEC-2023
DEFINITION  FACT complex subunit SPT16 [Dama dama].
ACCESSION   XP_061013715
VERSION     XP_061013715.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157732.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1047
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1047
                     /product="FACT complex subunit SPT16"
                     /calculated_mol_wt=119771
     Region          5..1001
                     /region_name="COG5406"
                     /note="Nucleosome binding factor SPN, SPT16 subunit
                     [Transcription, Replication, recombination and repair,
                     Chromatin structure and dynamics]"
                     /db_xref="CDD:227693"
     CDS             1..1047
                     /gene="SUPT16H"
                     /coded_by="XM_061157732.1:249..3392"
                     /db_xref="GeneID:133066537"
ORIGIN      
        1 mavtldkday yrrvkrlysn wrkgedeyan vdaivvsvgv deeivyakst alqtwlfgye
       61 ltdtimvfcd dkiifmaskk kveflkqian tkgnenanga paitllvrek nesnkgsfdk
      121 mieaikeskn gkkigvfskd kfpgefmksw ndclnkegfd kidisavvay tiavkedgel
      181 nlmkkaasit sevfnkffke rvmeivdade kvrhsklaes vekaieekky lagadpstve
      241 mcyppiiqsg gnynlkfsvv sdknhmhfga itcamgirfk sycsnlvrtl mvdpsqevqe
      301 nynfllqlqe ellkelrhgv kicdvynavm dvvkkqkpel lnkitknlgf gmgiefregs
      361 lvinsknqyk lkkgmvfsin lgfsdltnke gkkpeektya lfigdtvlvd edgpatvlts
      421 vkkkvknvgi flknedeeee eeekdeaedl lgrgsraall tertrnemta eekrrahqke
      481 laaqlneeak rrlteqkgeq qiqkarksnv syknpslmpk ephiremkiy idkkyetvim
      541 pvfgiatpfh iatiknisms vegdytylri nfycpgsalg rnegnifpnp eatfvkeity
      601 rasnmkapge qtvpalnlqn afriikevqk ryktreaeek ekegivkqds lvinlnrsnp
      661 klkdlyirpn iaqkrmqgsl eahvngfrft svrgdkvdil ynnikhalfq pcdgemiivl
      721 hfhlknaimf gkkrhtdvqf ytevgeittd lgkhqhmhdr ddlyaeqmer emrhklktaf
      781 knfiekveal tkeelefevp frdlgfngap yrstcllqpt ssalvnatew ppfvvtldev
      841 elihfervqf hlknfdmviv ykdyskkvtm inaipvasld pikewlnscd lkytegvqsl
      901 nwtkimktiv ddpegffeqg gwsflepege gsdaeegdse seiedetfnp seedyeeeee
      961 dsdedyssea eesdyskesl gseeesgkdw deleeearka dresryeeee eqsrsmsrkr
     1021 kasvhssgrg snrgsrhssa ppkkkrk
//
LOCUS       XP_061013716             619 aa            linear   MAM 02-DEC-2023
DEFINITION  TOX high mobility group box family member 4 isoform X1 [Dama dama].
ACCESSION   XP_061013716
VERSION     XP_061013716.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157733.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..619
                     /product="TOX high mobility group box family member 4
                     isoform X1"
                     /calculated_mol_wt=65956
     Region          140..>291
                     /region_name="NHP6B"
                     /note="Chromatin-associated proteins containing the HMG
                     domain [Chromatin structure and dynamics]; COG5648"
                     /db_xref="CDD:227935"
     Region          224..293
                     /region_name="HMG-box_TOX-like"
                     /note="high mobility group (HMG)-box found in the TOX high
                     mobility group box family; cd21995"
                     /db_xref="CDD:438811"
     Site            order(224..225,227..231,234..235,242,254..255,258,
                     261..262,269,273,276,280,283)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438811"
     CDS             1..619
                     /gene="TOX4"
                     /coded_by="XM_061157733.1:121..1980"
                     /db_xref="GeneID:133066538"
ORIGIN      
        1 mefpggndny ltitgpshpf lsgaetfhtp slgdeefeip pisldsdpsl avsdvvghfd
       61 dladpsssqd gsfsaqygvq tldmpvgmth glmeqgggll sggltmdldh sigtqysanp
      121 pvtidvpmtd mtsglmghsq lttidqsels sqlglslggg tilppaqspe drlsttpspt
      181 sslhedgvee frrqppsqkt vvveagkkqk apkkrkkkdp nepqkpvsay alffrdtqaa
      241 ikgqnpnatf gevskivasm wdslgeeqkq vykrkteaak keylkalaay kdnqecqatv
      301 etvdmdpapp sqtpspppva aadpaspapa steppalsps ivvnstlssy vanqassgag
      361 gqpnitklii tkqmlpssit msqggmvtvi patvvtsrgl qlgqtstati qpsqqaqivt
      421 rsvlqaaaaa aasmqlpppr lqppplqqmp qpptqqqvti lqqppplqam qqpppqkfri
      481 nlqqqppplq vkivppptlk mqttlvpppv esspeqpvnn spethtveet tpeticemit
      541 dvvpevesps qmdvelvsgs pmtlspqprc vrsgcenppv vskdwdneyc snecvvkhcr
      601 dvflawvasr nsntvvfvk
//
LOCUS       XP_061013717             613 aa            linear   MAM 02-DEC-2023
DEFINITION  TOX high mobility group box family member 4 isoform X2 [Dama dama].
ACCESSION   XP_061013717
VERSION     XP_061013717.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157734.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..613
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..613
                     /product="TOX high mobility group box family member 4
                     isoform X2"
                     /calculated_mol_wt=65339
     Region          134..>285
                     /region_name="NHP6B"
                     /note="Chromatin-associated proteins containing the HMG
                     domain [Chromatin structure and dynamics]; COG5648"
                     /db_xref="CDD:227935"
     Region          218..287
                     /region_name="HMG-box_TOX-like"
                     /note="high mobility group (HMG)-box found in the TOX high
                     mobility group box family; cd21995"
                     /db_xref="CDD:438811"
     Site            order(218..219,221..225,228..229,236,248..249,252,
                     255..256,263,267,270,274,277)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438811"
     CDS             1..613
                     /gene="TOX4"
                     /coded_by="XM_061157734.1:12..1853"
                     /db_xref="GeneID:133066538"
ORIGIN      
        1 mcsgtvrepv cplaislmkt fhtpslgdee feippislds dpslavsdvv ghfddladps
       61 ssqdgsfsaq ygvqtldmpv gmthglmeqg ggllsggltm dldhsigtqy sanppvtidv
      121 pmtdmtsglm ghsqlttidq selssqlgls lgggtilppa qspedrlstt psptsslhed
      181 gveefrrqpp sqktvvveag kkqkapkkrk kkdpnepqkp vsayalffrd tqaaikgqnp
      241 natfgevski vasmwdslge eqkqvykrkt eaakkeylka laaykdnqec qatvetvdmd
      301 pappsqtpsp ppvaaadpas papasteppa lspsivvnst lssyvanqas sgaggqpnit
      361 kliitkqmlp ssitmsqggm vtvipatvvt srglqlgqts tatiqpsqqa qivtrsvlqa
      421 aaaaaasmql ppprlqpppl qqmpqpptqq qvtilqqppp lqamqqpppq kfrinlqqqp
      481 pplqvkivpp ptlkmqttlv pppvesspeq pvnnspetht veettpetic emitdvvpev
      541 espsqmdvel vsgspmtlsp qprcvrsgce nppvvskdwd neycsnecvv khcrdvflaw
      601 vasrnsntvv fvk
//
LOCUS       XP_061013718             580 aa            linear   MAM 02-DEC-2023
DEFINITION  N6-adenosine-methyltransferase catalytic subunit [Dama dama].
ACCESSION   XP_061013718
VERSION     XP_061013718.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157735.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..580
                     /product="N6-adenosine-methyltransferase catalytic
                     subunit"
                     /calculated_mol_wt=64354
     Region          389..550
                     /region_name="MT-A70"
                     /note="pfam05063"
                     /db_xref="CDD:368270"
     CDS             1..580
                     /gene="METTL3"
                     /coded_by="XM_061157735.1:132..1874"
                     /db_xref="GeneID:133066539"
ORIGIN      
        1 msdtwssiqa hkkqldslre rlqrrrkqds ghldlrnpea alsptfrsds pvpaaptsgg
       61 pkpstasavp elatdpelek kllhhlsdls ltlptdavsi rlaistpdap atqdgvesll
      121 qkfaaqelie vkrsllqdda hptlvtyadh sklsammgav aekkgpgeva gtiagqkrra
      181 eqdsttaaaf tsslasglas sasevakept kksrkhaasd vdleieslln qqstkeqqsk
      241 kvsqeilell ntttakeqsi vekfrsrgra qvqefcdygt keecmkasda drpcrklhfr
      301 riinkhtdes lgdcsflntc fhmdtckyvh yeidacvdse apgskdhtps qelaltqsvg
      361 gdsnadrlfp pqwiccdiry ldvsilgkfa vvmadppwdi hmelpygtlt ddemrrlnip
      421 vlqddgflfl wvtgramelg reclnlwgye rvdeiiwvkt nqlqriirtg rtghwlnhgk
      481 ehclvgvkgn pqgfnqgldc dvivaevrst shkpdeiygm ierlspgtrk ielfgrphnv
      541 qpnwitlgnq ldgihlldpd vvarfkqryp dgiiskpknl
//
LOCUS       XP_061013719             216 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-related protein Rab-2B [Dama dama].
ACCESSION   XP_061013719
VERSION     XP_061013719.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157736.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..216
                     /product="ras-related protein Rab-2B"
                     /calculated_mol_wt=23984
     Region          1..216
                     /region_name="PLN03108"
                     /note="Rab family protein; Provisional"
                     /db_xref="CDD:178655"
     CDS             1..216
                     /gene="RAB2B"
                     /coded_by="XM_061157736.1:209..859"
                     /db_xref="GeneID:133066540"
ORIGIN      
        1 mtyaylfkyi iigdtgvgks clllqftdkr fqpvhdltig vefgarmvni dgkqiklqiw
       61 dtagqesfrs itrsyyrgaa gallvyditr retfnhltsw ledarqhsss nmvimlignk
      121 sdlesrrdvk reegeafare hglifmetsa ktacnveeaf intakeiyrk iqqglfdvhn
      181 eangikigpq qcistsvgss asqrgshdvg adsgcc
//
LOCUS       XP_061013720            1096 aa            linear   MAM 02-DEC-2023
DEFINITION  sal-like protein 2 isoform X1 [Dama dama].
ACCESSION   XP_061013720
VERSION     XP_061013720.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157737.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1096
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1096
                     /product="sal-like protein 2 isoform X1"
                     /calculated_mol_wt=114254
     Region          368..455
                     /region_name="SUF4-like"
                     /note="N-terminal domain of Oryza sativa transcription
                     factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana
                     SUF4 (AtSUF4), and similar proteins; cd20908"
                     /db_xref="CDD:411020"
     Region          371..392
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:411020"
     Region          371..391
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(371,374,387,391)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Site            order(376,382,389,391,398,405)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:411020"
     Region          399..419
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:411020"
     Region          399..419
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          629..649
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(634,636,638,640..641,644..645,648,662,664,668..669,
                     672..673,676,694,696,698,700..701,704..705,708)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          655..677
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          657..677
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(657,660,673,677)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          688..709
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          689..709
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          908..928
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          908..928
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          937..955
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..1096
                     /gene="SALL2"
                     /coded_by="XM_061157737.1:248..3538"
                     /db_xref="GeneID:133066541"
ORIGIN      
        1 maheagrssr lggpcgepae lggdvseddh pqvcakccaq ftdpteflah qnacstdppv
       61 mviiggqenp nnsstscepr peghsspqvm eaeqsnpsdc assvptdptw gperrgeess
      121 ghfliaatgt aaggggglil aspklgatpl ppestpappp pppppppppg vgsghlnipl
      181 ileelrvlqq rqihqmqmte qicrqvlllg slgqtvgtps spselpgtgt asstkpllpl
      241 fspikpvqtg ktlapsstss sgaeapkqaf fhlyhplgsq hpfsagavgr shkptpaasp
      301 alsgstdqli asphlafpgt tgllaaqclg aargleaaas pgllkpkngg gelsygevmg
      361 plekpggrhk crfcakvfgs dsalqihlrs htgerpykcn vcgnrfttrg nlkvhfhrhr
      421 ekyphvqmnp hpvpehldyv itssglpygm svppekaeee aavpgggver kplvastaal
      481 satesltlls tgagtttapa lpafnkfvlm kavepknkad entppgsegs aiagvaesga
      541 atrmqlsklv tslpswallt nhlkstgsfp fpyvleplga spsetsklqq lvekidrqga
      601 vavaptasga pttsapaass sassgpnqcv iclrvlscpr alrlhygqhg gerpfkckvc
      661 grafstrgnl rahfvghkas paaraqnscp icqkkftnav tlqqhvrmhl ggqipnggaa
      721 lseaggaaqe ngseqstvsg aggfpqqpsq qpspeeelse eeeedeeeee dvtdedslag
      781 rgsesggeka isvrgdseea sgteeevgtv aavatagkem dtnektiqqp cllpppppds
      841 ldqtqpmeqg gsdaaggsee gakpersssp gsalalegeg ggtpsveels lqevmrkepg
      901 essgrkacev cgqtfptqaa leehqkthpk egllftcvfc rqgfleratl kkhmllahhq
      961 vhlsthiwny spprrgqhls leglgpllsg yqvnlhdfls qgipsqlvrv gplslwnqdt
     1021 tflssdlpak pqtsssisis ttpsgpappv lfgpgteagk lppavgsrea kkraplflfw
     1081 plasktvpgk piieek
//
LOCUS       XP_061013721            1045 aa            linear   MAM 02-DEC-2023
DEFINITION  sal-like protein 2 isoform X2 [Dama dama].
ACCESSION   XP_061013721
VERSION     XP_061013721.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157738.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1045
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1045
                     /product="sal-like protein 2 isoform X2"
                     /calculated_mol_wt=108411
     Region          368..455
                     /region_name="SUF4-like"
                     /note="N-terminal domain of Oryza sativa transcription
                     factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana
                     SUF4 (AtSUF4), and similar proteins; cd20908"
                     /db_xref="CDD:411020"
     Region          371..392
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:411020"
     Region          371..391
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(371,374,387,391)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Site            order(376,382,389,391,398,405)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:411020"
     Region          399..419
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:411020"
     Region          399..419
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          629..649
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(634,636,638,640..641,644..645,648,662,664,668..669,
                     672..673,676,694,696,698,700..701,704..705,708)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          655..677
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          657..677
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(657,660,673,677)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          688..709
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          689..709
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..1045
                     /gene="SALL2"
                     /coded_by="XM_061157738.1:248..3385"
                     /db_xref="GeneID:133066541"
ORIGIN      
        1 maheagrssr lggpcgepae lggdvseddh pqvcakccaq ftdpteflah qnacstdppv
       61 mviiggqenp nnsstscepr peghsspqvm eaeqsnpsdc assvptdptw gperrgeess
      121 ghfliaatgt aaggggglil aspklgatpl ppestpappp pppppppppg vgsghlnipl
      181 ileelrvlqq rqihqmqmte qicrqvlllg slgqtvgtps spselpgtgt asstkpllpl
      241 fspikpvqtg ktlapsstss sgaeapkqaf fhlyhplgsq hpfsagavgr shkptpaasp
      301 alsgstdqli asphlafpgt tgllaaqclg aargleaaas pgllkpkngg gelsygevmg
      361 plekpggrhk crfcakvfgs dsalqihlrs htgerpykcn vcgnrfttrg nlkvhfhrhr
      421 ekyphvqmnp hpvpehldyv itssglpygm svppekaeee aavpgggver kplvastaal
      481 satesltlls tgagtttapa lpafnkfvlm kavepknkad entppgsegs aiagvaesga
      541 atrmqlsklv tslpswallt nhlkstgsfp fpyvleplga spsetsklqq lvekidrqga
      601 vavaptasga pttsapaass sassgpnqcv iclrvlscpr alrlhygqhg gerpfkckvc
      661 grafstrgnl rahfvghkas paaraqnscp icqkkftnav tlqqhvrmhl ggqipnggaa
      721 lseaggaaqe ngseqstvsg aggfpqqpsq qpspeeelse eeeedeeeee dvtdedslag
      781 rgsesggeka isvrgdseea sgteeevgtv aavatagkem dtnektiqqp cllpppppds
      841 ldqtqpmeqg gsdaaggsee gakpersssp gsalalegeg ggtpsveels lqevmrkepg
      901 essgrkacev hlsthiwnys pprrgqhlsl eglgpllsgy qvnlhdflsq gipsqlvrvg
      961 plslwnqdtt flssdlpakp qtsssisist tpsgpappvl fgpgteagkl ppavgsreak
     1021 kraplflfwp lasktvpgkp iieek
//
LOCUS       XP_061013722            1008 aa            linear   MAM 02-DEC-2023
DEFINITION  sal-like protein 2 isoform X3 [Dama dama].
ACCESSION   XP_061013722
VERSION     XP_061013722.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157739.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1008
                     /product="sal-like protein 2 isoform X3"
                     /calculated_mol_wt=105128
     Region          368..455
                     /region_name="SUF4-like"
                     /note="N-terminal domain of Oryza sativa transcription
                     factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana
                     SUF4 (AtSUF4), and similar proteins; cd20908"
                     /db_xref="CDD:411020"
     Region          371..392
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:411020"
     Region          371..391
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(371,374,387,391)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Site            order(376,382,389,391,398,405)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:411020"
     Region          399..419
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:411020"
     Region          399..419
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          629..649
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(634,636,638,640..641,644..645,648,662,664,668..669,
                     672..673,676,694,696,698,700..701,704..705,708)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          655..677
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          657..677
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(657,660,673,677)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          688..709
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          689..709
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          908..928
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          908..928
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          937..958
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(937,940,953,958)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     CDS             1..1008
                     /gene="SALL2"
                     /coded_by="XM_061157739.1:248..3274"
                     /db_xref="GeneID:133066541"
ORIGIN      
        1 maheagrssr lggpcgepae lggdvseddh pqvcakccaq ftdpteflah qnacstdppv
       61 mviiggqenp nnsstscepr peghsspqvm eaeqsnpsdc assvptdptw gperrgeess
      121 ghfliaatgt aaggggglil aspklgatpl ppestpappp pppppppppg vgsghlnipl
      181 ileelrvlqq rqihqmqmte qicrqvlllg slgqtvgtps spselpgtgt asstkpllpl
      241 fspikpvqtg ktlapsstss sgaeapkqaf fhlyhplgsq hpfsagavgr shkptpaasp
      301 alsgstdqli asphlafpgt tgllaaqclg aargleaaas pgllkpkngg gelsygevmg
      361 plekpggrhk crfcakvfgs dsalqihlrs htgerpykcn vcgnrfttrg nlkvhfhrhr
      421 ekyphvqmnp hpvpehldyv itssglpygm svppekaeee aavpgggver kplvastaal
      481 satesltlls tgagtttapa lpafnkfvlm kavepknkad entppgsegs aiagvaesga
      541 atrmqlsklv tslpswallt nhlkstgsfp fpyvleplga spsetsklqq lvekidrqga
      601 vavaptasga pttsapaass sassgpnqcv iclrvlscpr alrlhygqhg gerpfkckvc
      661 grafstrgnl rahfvghkas paaraqnscp icqkkftnav tlqqhvrmhl ggqipnggaa
      721 lseaggaaqe ngseqstvsg aggfpqqpsq qpspeeelse eeeedeeeee dvtdedslag
      781 rgsesggeka isvrgdseea sgteeevgtv aavatagkem dtnektiqqp cllpppppds
      841 ldqtqpmeqg gsdaaggsee gakpersssp gsalalegeg ggtpsveels lqevmrkepg
      901 essgrkacev cgqtfptqaa leehqkthpk egllftcvfc rqgfleratl kkhmllahhq
      961 alhhqcclaq elrlgsclqq wdpekprrel pfssfgllhp rqclgsps
//
LOCUS       XP_061013726             113 aa            linear   MAM 02-DEC-2023
DEFINITION  dolichyl-diphosphooligosaccharide--protein glycosyltransferase
            subunit DAD1 [Dama dama].
ACCESSION   XP_061013726
VERSION     XP_061013726.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157743.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..113
                     /product="dolichyl-diphosphooligosaccharide--protein
                     glycosyltransferase subunit DAD1"
                     /calculated_mol_wt=12380
     Region          7..113
                     /region_name="DAD"
                     /note="DAD family; pfam02109"
                     /db_xref="CDD:460448"
     CDS             1..113
                     /gene="DAD1"
                     /coded_by="XM_061157743.1:100..441"
                     /db_xref="GeneID:133066557"
ORIGIN      
        1 msasvlsvis rfleeylsst pqrlkllday llyilltgal qfgycllvgt fpfnsflsgf
       61 iscvgsfila vclriqinpq nkadfqgisp erafadflfa stilhlvvmn fvg
//
LOCUS       XP_061013727             582 aa            linear   MAM 02-DEC-2023
DEFINITION  matrix metalloproteinase-14 [Dama dama].
ACCESSION   XP_061013727
VERSION     XP_061013727.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157744.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..582
                     /product="matrix metalloproteinase-14"
                     /calculated_mol_wt=65852
     Region          35..87
                     /region_name="PG_binding_1"
                     /note="Putative peptidoglycan binding domain; pfam01471"
                     /db_xref="CDD:460223"
     Region          117..283
                     /region_name="Peptidase_M10"
                     /note="Matrixin; pfam00413"
                     /db_xref="CDD:425668"
     Region          315..507
                     /region_name="HX"
                     /note="Hemopexin-like repeats.; Hemopexin is a
                     heme-binding protein that transports heme to the liver.
                     Hemopexin-like repeats occur in vitronectin and some
                     matrix metalloproteinases family (matrixins). The HX
                     repeats of some matrixins bind tissue inhibitor of...;
                     cd00094"
                     /db_xref="CDD:238046"
     Site            order(323,325,368,370,415,417,463,465)
                     /site_type="metal-binding"
                     /note="Metal binding sites [ion binding]"
                     /db_xref="CDD:238046"
     Region          <560..582
                     /region_name="DUF3377"
                     /note="Domain of unknown function (DUF3377); pfam11857"
                     /db_xref="CDD:463374"
     CDS             1..582
                     /gene="MMP14"
                     /coded_by="XM_061157744.1:269..2017"
                     /db_xref="GeneID:133066559"
ORIGIN      
        1 mspaprpacs lllpvltlas alaslssaqs sfspeawlqq ygylppgdlr thtqrspqsl
       61 saaiaamqrf yglrvtgkad adtmkamrrp rcgvpdkfga eikanvrrkr yaiqglkwqh
      121 neitfciqny tpkvgeyatf eairkafrvw esatplrfre vpyayiregh ekqadimiff
      181 aegfhgdstp fdgeggflah ayfpgpnigg dthfdsaepw tvrnedlngn diflvavhel
      241 ghalglehsn dpsaimapfy qwmdtenfvl pdddrrgiqq lygsksgfpt kmppqprtts
      301 rpsvpdkpkn ptygpnicdg nfdtvamlrg emfvfkerwf wrvrknqvmd gypmpigqfw
      361 rglpasinta yerkdgkfvf fkgdkhwvfd easlepgypk hikelgrglp tdridaalfw
      421 mpngktyffr gnkyyrfnee lriveseypk nikvwegipe sprgsfmgsd evftyfykgn
      481 kywkfnnqkl kvepgypksa lrdwmgcpss ggqpdegtee eteviiievd eegsgavsaa
      541 avvlpvllll lvlavglavf ffrrhgtpkr llycqrslld kv
//
LOCUS       XP_061013728             712 aa            linear   MAM 02-DEC-2023
DEFINITION  low-density lipoprotein receptor-related protein 10 isoform X1
            [Dama dama].
ACCESSION   XP_061013728
VERSION     XP_061013728.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157745.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..712
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..712
                     /product="low-density lipoprotein receptor-related protein
                     10 isoform X1"
                     /calculated_mol_wt=76486
     Region          33..133
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cl00049"
                     /db_xref="CDD:412131"
     Site            order(38,40,42,69,74,103,129,131,133)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          139..173
                     /region_name="LDLa"
                     /note="Low Density Lipoprotein Receptor Class A domain, a
                     cysteine-rich repeat that plays a central role in
                     mammalian cholesterol metabolism; the receptor protein
                     binds LDL and transports it into cells by endocytosis; 7
                     successive cysteine-rich repeats of about...; cd00112"
                     /db_xref="CDD:238060"
     Site            order(144,152,163..164)
                     /site_type="active"
                     /note="putative binding surface [active]"
                     /db_xref="CDD:238060"
     Site            order(156,159,163,169..170)
                     /site_type="other"
                     /note="calcium-binding site [ion binding]"
                     /db_xref="CDD:238060"
     Site            166..170
                     /site_type="other"
                     /note="D-X-S-D-E motif"
                     /db_xref="CDD:238060"
     Region          191..301
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(199,201,203,232,237,274,298,300)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          <327..352
                     /region_name="LDLa"
                     /note="Low Density Lipoprotein Receptor Class A domain, a
                     cysteine-rich repeat that plays a central role in
                     mammalian cholesterol metabolism; the receptor protein
                     binds LDL and transports it into cells by endocytosis; 7
                     successive cysteine-rich repeats of about...; cd00112"
                     /db_xref="CDD:238060"
     Site            order(335,338,342,348..349)
                     /site_type="other"
                     /note="calcium-binding site [ion binding]"
                     /db_xref="CDD:238060"
     Site            345..349
                     /site_type="other"
                     /note="D-X-S-D-E motif"
                     /db_xref="CDD:238060"
     Region          398..432
                     /region_name="LDLa"
                     /note="Low Density Lipoprotein Receptor Class A domain, a
                     cysteine-rich repeat that plays a central role in
                     mammalian cholesterol metabolism; the receptor protein
                     binds LDL and transports it into cells by endocytosis; 7
                     successive cysteine-rich repeats of about...; cd00112"
                     /db_xref="CDD:238060"
     Site            order(403,411,422..423)
                     /site_type="active"
                     /note="putative binding surface [active]"
                     /db_xref="CDD:238060"
     Site            order(415,418,422,428..429)
                     /site_type="other"
                     /note="calcium-binding site [ion binding]"
                     /db_xref="CDD:238060"
     Site            425..429
                     /site_type="other"
                     /note="D-X-S-D-E motif"
                     /db_xref="CDD:238060"
     Region          <570..701
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..712
                     /gene="LRP10"
                     /coded_by="XM_061157745.1:102..2240"
                     /db_xref="GeneID:133066560"
ORIGIN      
        1 mlpailllfl ggtvahpdrl ifpnpacedp pavllevqgt lqrpvgrdsr sspanctwli
       61 lgskeqtvtv rfqklhlacg serltlrspi qpqlslceap asplqlpggn vtitysyvga
      121 rapmgqgfll sysqdwlmcl qeefqclnhr cvplfqrcdg vdacgdgsde agcssdpfpd
      181 lalapvltpp cnhtledfyg vfsslgyshl asvshpqscr wlldprdgrr lavrftaldl
      241 gygdvvrvyd gagpletlrl lrslthfsng kavtvetlsg qatvdyhtvp wstgrgfnat
      301 yhvrgyclpw drpcglgsgl gaseglserc yseaqrcdgs wdcadgtdee ncpscpaghy
      361 pcgaagtpga tacylpadrc nyqtfcadga derrcrhcqp gnfrcrdekc vyetwvcdgq
      421 pdcadgsdew dcsyalprkv itaavigslv cglllvialg ctcklyairt qeysifapls
      481 rmeaeivqqq appsygqlia qgaippvedf ptenpndnsv lgnlrsllhi lrqdmtpgst
      541 sgarrrqrgr smrrlvrrlr rwgllprtnp partpetrsq vtpsaappet ldgstgpahe
      601 ggavggqege qapplpvkap lppagtspaf ptvpeapgpl tavplepsll sgvvqalrgr
      661 llpslrppgp trappgphtt vlspededdv llvplaepgv wvveaedepl la
//
LOCUS       XP_061013729             575 aa            linear   MAM 02-DEC-2023
DEFINITION  low-density lipoprotein receptor-related protein 10 isoform X2
            [Dama dama].
ACCESSION   XP_061013729
VERSION     XP_061013729.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157746.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..575
                     /product="low-density lipoprotein receptor-related protein
                     10 isoform X2"
                     /calculated_mol_wt=61666
     Region          2..36
                     /region_name="LDLa"
                     /note="Low Density Lipoprotein Receptor Class A domain, a
                     cysteine-rich repeat that plays a central role in
                     mammalian cholesterol metabolism; the receptor protein
                     binds LDL and transports it into cells by endocytosis; 7
                     successive cysteine-rich repeats of about...; cd00112"
                     /db_xref="CDD:238060"
     Site            order(7,15,26..27)
                     /site_type="active"
                     /note="putative binding surface [active]"
                     /db_xref="CDD:238060"
     Site            order(19,22,26,32..33)
                     /site_type="other"
                     /note="calcium-binding site [ion binding]"
                     /db_xref="CDD:238060"
     Site            29..33
                     /site_type="other"
                     /note="D-X-S-D-E motif"
                     /db_xref="CDD:238060"
     Region          54..164
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(62,64,66,95,100,137,161,163)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          <190..215
                     /region_name="LDLa"
                     /note="Low Density Lipoprotein Receptor Class A domain, a
                     cysteine-rich repeat that plays a central role in
                     mammalian cholesterol metabolism; the receptor protein
                     binds LDL and transports it into cells by endocytosis; 7
                     successive cysteine-rich repeats of about...; cd00112"
                     /db_xref="CDD:238060"
     Site            order(198,201,205,211..212)
                     /site_type="other"
                     /note="calcium-binding site [ion binding]"
                     /db_xref="CDD:238060"
     Site            208..212
                     /site_type="other"
                     /note="D-X-S-D-E motif"
                     /db_xref="CDD:238060"
     Region          261..295
                     /region_name="LDLa"
                     /note="Low Density Lipoprotein Receptor Class A domain, a
                     cysteine-rich repeat that plays a central role in
                     mammalian cholesterol metabolism; the receptor protein
                     binds LDL and transports it into cells by endocytosis; 7
                     successive cysteine-rich repeats of about...; cd00112"
                     /db_xref="CDD:238060"
     Site            order(266,274,285..286)
                     /site_type="active"
                     /note="putative binding surface [active]"
                     /db_xref="CDD:238060"
     Site            order(278,281,285,291..292)
                     /site_type="other"
                     /note="calcium-binding site [ion binding]"
                     /db_xref="CDD:238060"
     Site            288..292
                     /site_type="other"
                     /note="D-X-S-D-E motif"
                     /db_xref="CDD:238060"
     Region          <433..564
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..575
                     /gene="LRP10"
                     /coded_by="XM_061157746.1:149..1876"
                     /db_xref="GeneID:133066560"
ORIGIN      
        1 mclqeefqcl nhrcvplfqr cdgvdacgdg sdeagcssdp fpdlalapvl tppcnhtled
       61 fygvfsslgy shlasvshpq scrwlldprd grrlavrfta ldlgygdvvr vydgagplet
      121 lrllrslthf sngkavtvet lsgqatvdyh tvpwstgrgf natyhvrgyc lpwdrpcglg
      181 sglgasegls ercyseaqrc dgswdcadgt deencpscpa ghypcgaagt pgatacylpa
      241 drcnyqtfca dgaderrcrh cqpgnfrcrd ekcvyetwvc dgqpdcadgs dewdcsyalp
      301 rkvitaavig slvcglllvi algctcklya irtqeysifa plsrmeaeiv qqqappsygq
      361 liaqgaippv edfptenpnd nsvlgnlrsl lhilrqdmtp gstsgarrrq rgrsmrrlvr
      421 rlrrwgllpr tnppartpet rsqvtpsaap petldgstgp aheggavggq egeqapplpv
      481 kaplppagts pafptvpeap gpltavplep sllsgvvqal rgrllpslrp pgptrappgp
      541 httvlspede ddvllvplae pgvwvveaed eplla
//
LOCUS       XP_061013731             511 aa            linear   MAM 02-DEC-2023
DEFINITION  Y+L amino acid transporter 1 [Dama dama].
ACCESSION   XP_061013731
VERSION     XP_061013731.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157748.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..511
                     /product="Y+L amino acid transporter 1"
                     /calculated_mol_wt=55980
     Region          4..493
                     /region_name="2A0308"
                     /note="L-type amino acid transporter; TIGR00911"
                     /db_xref="CDD:273332"
     CDS             1..511
                     /gene="SLC7A7"
                     /coded_by="XM_061157748.1:203..1738"
                     /db_xref="GeneID:133066561"
ORIGIN      
        1 mvdgvkyeva sqqerdatpl addaspkpeq vqlkkeisll ngvclivgnm igsgifvspk
       61 gvliysasfg lslviwavgg vfsvfgalcy aelgttikks gasyayilea fggllafirl
      121 wtslliiept sqaviaitfa nylvqpifpn clapyaaarl laaacicllt fincayvkwg
      181 tlvqdvftya kvlaliaiii agivrlgqga sthfensfeg ssfsvgdial alysalfsys
      241 gwdtlnyvte eiqnpernlp lsigismpiv tiiyiltnva yytvlemrdi lasdavavtf
      301 adqifgifnw tipfavalsc fgglnasiva asrlffvgsr eghlpdticm ihverftpvp
      361 allfnglmal iylcvedifq linyysfsyw ffvglsivgq lylrwkepnr prplklslff
      421 pivfclctvf lvavplysdt insligigia lsglpfyffi irvpehkrpl clrrivasvt
      481 wyvqvlcmsv aaemdledgg eqskqqdpks e
//
LOCUS       XP_061013732             511 aa            linear   MAM 02-DEC-2023
DEFINITION  Y+L amino acid transporter 1 [Dama dama].
ACCESSION   XP_061013732
VERSION     XP_061013732.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157749.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..511
                     /product="Y+L amino acid transporter 1"
                     /calculated_mol_wt=55980
     Region          4..493
                     /region_name="2A0308"
                     /note="L-type amino acid transporter; TIGR00911"
                     /db_xref="CDD:273332"
     CDS             1..511
                     /gene="SLC7A7"
                     /coded_by="XM_061157749.1:378..1913"
                     /db_xref="GeneID:133066561"
ORIGIN      
        1 mvdgvkyeva sqqerdatpl addaspkpeq vqlkkeisll ngvclivgnm igsgifvspk
       61 gvliysasfg lslviwavgg vfsvfgalcy aelgttikks gasyayilea fggllafirl
      121 wtslliiept sqaviaitfa nylvqpifpn clapyaaarl laaacicllt fincayvkwg
      181 tlvqdvftya kvlaliaiii agivrlgqga sthfensfeg ssfsvgdial alysalfsys
      241 gwdtlnyvte eiqnpernlp lsigismpiv tiiyiltnva yytvlemrdi lasdavavtf
      301 adqifgifnw tipfavalsc fgglnasiva asrlffvgsr eghlpdticm ihverftpvp
      361 allfnglmal iylcvedifq linyysfsyw ffvglsivgq lylrwkepnr prplklslff
      421 pivfclctvf lvavplysdt insligigia lsglpfyffi irvpehkrpl clrrivasvt
      481 wyvqvlcmsv aaemdledgg eqskqqdpks e
//
LOCUS       XP_061013733             511 aa            linear   MAM 02-DEC-2023
DEFINITION  Y+L amino acid transporter 1 [Dama dama].
ACCESSION   XP_061013733
VERSION     XP_061013733.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157750.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..511
                     /product="Y+L amino acid transporter 1"
                     /calculated_mol_wt=55980
     Region          4..493
                     /region_name="2A0308"
                     /note="L-type amino acid transporter; TIGR00911"
                     /db_xref="CDD:273332"
     CDS             1..511
                     /gene="SLC7A7"
                     /coded_by="XM_061157750.1:162..1697"
                     /db_xref="GeneID:133066561"
ORIGIN      
        1 mvdgvkyeva sqqerdatpl addaspkpeq vqlkkeisll ngvclivgnm igsgifvspk
       61 gvliysasfg lslviwavgg vfsvfgalcy aelgttikks gasyayilea fggllafirl
      121 wtslliiept sqaviaitfa nylvqpifpn clapyaaarl laaacicllt fincayvkwg
      181 tlvqdvftya kvlaliaiii agivrlgqga sthfensfeg ssfsvgdial alysalfsys
      241 gwdtlnyvte eiqnpernlp lsigismpiv tiiyiltnva yytvlemrdi lasdavavtf
      301 adqifgifnw tipfavalsc fgglnasiva asrlffvgsr eghlpdticm ihverftpvp
      361 allfnglmal iylcvedifq linyysfsyw ffvglsivgq lylrwkepnr prplklslff
      421 pivfclctvf lvavplysdt insligigia lsglpfyffi irvpehkrpl clrrivasvt
      481 wyvqvlcmsv aaemdledgg eqskqqdpks e
//
LOCUS       XP_061013734             511 aa            linear   MAM 02-DEC-2023
DEFINITION  Y+L amino acid transporter 1 [Dama dama].
ACCESSION   XP_061013734
VERSION     XP_061013734.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157751.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..511
                     /product="Y+L amino acid transporter 1"
                     /calculated_mol_wt=55980
     Region          4..493
                     /region_name="2A0308"
                     /note="L-type amino acid transporter; TIGR00911"
                     /db_xref="CDD:273332"
     CDS             1..511
                     /gene="SLC7A7"
                     /coded_by="XM_061157751.1:521..2056"
                     /db_xref="GeneID:133066561"
ORIGIN      
        1 mvdgvkyeva sqqerdatpl addaspkpeq vqlkkeisll ngvclivgnm igsgifvspk
       61 gvliysasfg lslviwavgg vfsvfgalcy aelgttikks gasyayilea fggllafirl
      121 wtslliiept sqaviaitfa nylvqpifpn clapyaaarl laaacicllt fincayvkwg
      181 tlvqdvftya kvlaliaiii agivrlgqga sthfensfeg ssfsvgdial alysalfsys
      241 gwdtlnyvte eiqnpernlp lsigismpiv tiiyiltnva yytvlemrdi lasdavavtf
      301 adqifgifnw tipfavalsc fgglnasiva asrlffvgsr eghlpdticm ihverftpvp
      361 allfnglmal iylcvedifq linyysfsyw ffvglsivgq lylrwkepnr prplklslff
      421 pivfclctvf lvavplysdt insligigia lsglpfyffi irvpehkrpl clrrivasvt
      481 wyvqvlcmsv aaemdledgg eqskqqdpks e
//
LOCUS       XP_061013735             463 aa            linear   MAM 02-DEC-2023
DEFINITION  probable RNA-binding protein 23 isoform X1 [Dama dama].
ACCESSION   XP_061013735
VERSION     XP_061013735.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157752.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..463
                     /product="probable RNA-binding protein 23 isoform X1"
                     /calculated_mol_wt=50766
     Region          76..462
                     /region_name="SF-CC1"
                     /note="splicing factor, CC1-like family; TIGR01622"
                     /db_xref="CDD:273721"
     CDS             1..463
                     /gene="RBM23"
                     /coded_by="XM_061157752.1:243..1634"
                     /db_xref="GeneID:133066562"
ORIGIN      
        1 masddfdivi eamleapykk eedeqqrkev kkdspsnmtn stsnigtsgc gtdgssvtdg
       61 tsatngngts geaskkkrsr shsksrerkc srsrdrdrhr rknsrsrsrd rqrrhrsrsw
      121 drrhssesrs qdwrredrvh yrspplatgr rygnsksphf rekspvrepv dnlspeerda
      181 rtvfcmqlaa rirprdledf fsavgkvrdv riisdrnsrr skgiayvefc eiqsvplaig
      241 ltgqrllgvp iivqasqaek nrlaamannl qkgsggpmrl yvgslhfnit edmlrgifep
      301 fgkidnivlm kdsetgrskg ygfitfsdse carraleqln gfelagrpmr ighvterpdg
      361 gtditfpdgd qeldlgsvgg rlqlmaklae gsgiqlpttt aaaaavaqaa aaqaaalqln
      421 gavplgalnp aaltalspal nlasqaiasq cfqlsslftp qtm
//
LOCUS       XP_061013736             463 aa            linear   MAM 02-DEC-2023
DEFINITION  probable RNA-binding protein 23 isoform X1 [Dama dama].
ACCESSION   XP_061013736
VERSION     XP_061013736.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157753.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..463
                     /product="probable RNA-binding protein 23 isoform X1"
                     /calculated_mol_wt=50766
     Region          76..462
                     /region_name="SF-CC1"
                     /note="splicing factor, CC1-like family; TIGR01622"
                     /db_xref="CDD:273721"
     CDS             1..463
                     /gene="RBM23"
                     /coded_by="XM_061157753.1:817..2208"
                     /db_xref="GeneID:133066562"
ORIGIN      
        1 masddfdivi eamleapykk eedeqqrkev kkdspsnmtn stsnigtsgc gtdgssvtdg
       61 tsatngngts geaskkkrsr shsksrerkc srsrdrdrhr rknsrsrsrd rqrrhrsrsw
      121 drrhssesrs qdwrredrvh yrspplatgr rygnsksphf rekspvrepv dnlspeerda
      181 rtvfcmqlaa rirprdledf fsavgkvrdv riisdrnsrr skgiayvefc eiqsvplaig
      241 ltgqrllgvp iivqasqaek nrlaamannl qkgsggpmrl yvgslhfnit edmlrgifep
      301 fgkidnivlm kdsetgrskg ygfitfsdse carraleqln gfelagrpmr ighvterpdg
      361 gtditfpdgd qeldlgsvgg rlqlmaklae gsgiqlpttt aaaaavaqaa aaqaaalqln
      421 gavplgalnp aaltalspal nlasqaiasq cfqlsslftp qtm
//
LOCUS       XP_061013737             463 aa            linear   MAM 02-DEC-2023
DEFINITION  probable RNA-binding protein 23 isoform X1 [Dama dama].
ACCESSION   XP_061013737
VERSION     XP_061013737.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157754.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..463
                     /product="probable RNA-binding protein 23 isoform X1"
                     /calculated_mol_wt=50766
     Region          76..462
                     /region_name="SF-CC1"
                     /note="splicing factor, CC1-like family; TIGR01622"
                     /db_xref="CDD:273721"
     CDS             1..463
                     /gene="RBM23"
                     /coded_by="XM_061157754.1:212..1603"
                     /db_xref="GeneID:133066562"
ORIGIN      
        1 masddfdivi eamleapykk eedeqqrkev kkdspsnmtn stsnigtsgc gtdgssvtdg
       61 tsatngngts geaskkkrsr shsksrerkc srsrdrdrhr rknsrsrsrd rqrrhrsrsw
      121 drrhssesrs qdwrredrvh yrspplatgr rygnsksphf rekspvrepv dnlspeerda
      181 rtvfcmqlaa rirprdledf fsavgkvrdv riisdrnsrr skgiayvefc eiqsvplaig
      241 ltgqrllgvp iivqasqaek nrlaamannl qkgsggpmrl yvgslhfnit edmlrgifep
      301 fgkidnivlm kdsetgrskg ygfitfsdse carraleqln gfelagrpmr ighvterpdg
      361 gtditfpdgd qeldlgsvgg rlqlmaklae gsgiqlpttt aaaaavaqaa aaqaaalqln
      421 gavplgalnp aaltalspal nlasqaiasq cfqlsslftp qtm
//
LOCUS       XP_061013738             463 aa            linear   MAM 02-DEC-2023
DEFINITION  probable RNA-binding protein 23 isoform X1 [Dama dama].
ACCESSION   XP_061013738
VERSION     XP_061013738.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157755.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..463
                     /product="probable RNA-binding protein 23 isoform X1"
                     /calculated_mol_wt=50766
     Region          76..462
                     /region_name="SF-CC1"
                     /note="splicing factor, CC1-like family; TIGR01622"
                     /db_xref="CDD:273721"
     CDS             1..463
                     /gene="RBM23"
                     /coded_by="XM_061157755.1:764..2155"
                     /db_xref="GeneID:133066562"
ORIGIN      
        1 masddfdivi eamleapykk eedeqqrkev kkdspsnmtn stsnigtsgc gtdgssvtdg
       61 tsatngngts geaskkkrsr shsksrerkc srsrdrdrhr rknsrsrsrd rqrrhrsrsw
      121 drrhssesrs qdwrredrvh yrspplatgr rygnsksphf rekspvrepv dnlspeerda
      181 rtvfcmqlaa rirprdledf fsavgkvrdv riisdrnsrr skgiayvefc eiqsvplaig
      241 ltgqrllgvp iivqasqaek nrlaamannl qkgsggpmrl yvgslhfnit edmlrgifep
      301 fgkidnivlm kdsetgrskg ygfitfsdse carraleqln gfelagrpmr ighvterpdg
      361 gtditfpdgd qeldlgsvgg rlqlmaklae gsgiqlpttt aaaaavaqaa aaqaaalqln
      421 gavplgalnp aaltalspal nlasqaiasq cfqlsslftp qtm
//
LOCUS       XP_061013739             463 aa            linear   MAM 02-DEC-2023
DEFINITION  probable RNA-binding protein 23 isoform X1 [Dama dama].
ACCESSION   XP_061013739
VERSION     XP_061013739.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157756.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..463
                     /product="probable RNA-binding protein 23 isoform X1"
                     /calculated_mol_wt=50766
     Region          76..462
                     /region_name="SF-CC1"
                     /note="splicing factor, CC1-like family; TIGR01622"
                     /db_xref="CDD:273721"
     CDS             1..463
                     /gene="RBM23"
                     /coded_by="XM_061157756.1:295..1686"
                     /db_xref="GeneID:133066562"
ORIGIN      
        1 masddfdivi eamleapykk eedeqqrkev kkdspsnmtn stsnigtsgc gtdgssvtdg
       61 tsatngngts geaskkkrsr shsksrerkc srsrdrdrhr rknsrsrsrd rqrrhrsrsw
      121 drrhssesrs qdwrredrvh yrspplatgr rygnsksphf rekspvrepv dnlspeerda
      181 rtvfcmqlaa rirprdledf fsavgkvrdv riisdrnsrr skgiayvefc eiqsvplaig
      241 ltgqrllgvp iivqasqaek nrlaamannl qkgsggpmrl yvgslhfnit edmlrgifep
      301 fgkidnivlm kdsetgrskg ygfitfsdse carraleqln gfelagrpmr ighvterpdg
      361 gtditfpdgd qeldlgsvgg rlqlmaklae gsgiqlpttt aaaaavaqaa aaqaaalqln
      421 gavplgalnp aaltalspal nlasqaiasq cfqlsslftp qtm
//
LOCUS       XP_061013740             463 aa            linear   MAM 02-DEC-2023
DEFINITION  probable RNA-binding protein 23 isoform X1 [Dama dama].
ACCESSION   XP_061013740
VERSION     XP_061013740.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157757.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..463
                     /product="probable RNA-binding protein 23 isoform X1"
                     /calculated_mol_wt=50766
     Region          76..462
                     /region_name="SF-CC1"
                     /note="splicing factor, CC1-like family; TIGR01622"
                     /db_xref="CDD:273721"
     CDS             1..463
                     /gene="RBM23"
                     /coded_by="XM_061157757.1:332..1723"
                     /db_xref="GeneID:133066562"
ORIGIN      
        1 masddfdivi eamleapykk eedeqqrkev kkdspsnmtn stsnigtsgc gtdgssvtdg
       61 tsatngngts geaskkkrsr shsksrerkc srsrdrdrhr rknsrsrsrd rqrrhrsrsw
      121 drrhssesrs qdwrredrvh yrspplatgr rygnsksphf rekspvrepv dnlspeerda
      181 rtvfcmqlaa rirprdledf fsavgkvrdv riisdrnsrr skgiayvefc eiqsvplaig
      241 ltgqrllgvp iivqasqaek nrlaamannl qkgsggpmrl yvgslhfnit edmlrgifep
      301 fgkidnivlm kdsetgrskg ygfitfsdse carraleqln gfelagrpmr ighvterpdg
      361 gtditfpdgd qeldlgsvgg rlqlmaklae gsgiqlpttt aaaaavaqaa aaqaaalqln
      421 gavplgalnp aaltalspal nlasqaiasq cfqlsslftp qtm
//
LOCUS       XP_061013741             463 aa            linear   MAM 02-DEC-2023
DEFINITION  probable RNA-binding protein 23 isoform X1 [Dama dama].
ACCESSION   XP_061013741
VERSION     XP_061013741.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157758.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..463
                     /product="probable RNA-binding protein 23 isoform X1"
                     /calculated_mol_wt=50766
     Region          76..462
                     /region_name="SF-CC1"
                     /note="splicing factor, CC1-like family; TIGR01622"
                     /db_xref="CDD:273721"
     CDS             1..463
                     /gene="RBM23"
                     /coded_by="XM_061157758.1:399..1790"
                     /db_xref="GeneID:133066562"
ORIGIN      
        1 masddfdivi eamleapykk eedeqqrkev kkdspsnmtn stsnigtsgc gtdgssvtdg
       61 tsatngngts geaskkkrsr shsksrerkc srsrdrdrhr rknsrsrsrd rqrrhrsrsw
      121 drrhssesrs qdwrredrvh yrspplatgr rygnsksphf rekspvrepv dnlspeerda
      181 rtvfcmqlaa rirprdledf fsavgkvrdv riisdrnsrr skgiayvefc eiqsvplaig
      241 ltgqrllgvp iivqasqaek nrlaamannl qkgsggpmrl yvgslhfnit edmlrgifep
      301 fgkidnivlm kdsetgrskg ygfitfsdse carraleqln gfelagrpmr ighvterpdg
      361 gtditfpdgd qeldlgsvgg rlqlmaklae gsgiqlpttt aaaaavaqaa aaqaaalqln
      421 gavplgalnp aaltalspal nlasqaiasq cfqlsslftp qtm
//
LOCUS       XP_061013742             463 aa            linear   MAM 02-DEC-2023
DEFINITION  probable RNA-binding protein 23 isoform X1 [Dama dama].
ACCESSION   XP_061013742
VERSION     XP_061013742.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157759.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..463
                     /product="probable RNA-binding protein 23 isoform X1"
                     /calculated_mol_wt=50766
     Region          76..462
                     /region_name="SF-CC1"
                     /note="splicing factor, CC1-like family; TIGR01622"
                     /db_xref="CDD:273721"
     CDS             1..463
                     /gene="RBM23"
                     /coded_by="XM_061157759.1:301..1692"
                     /db_xref="GeneID:133066562"
ORIGIN      
        1 masddfdivi eamleapykk eedeqqrkev kkdspsnmtn stsnigtsgc gtdgssvtdg
       61 tsatngngts geaskkkrsr shsksrerkc srsrdrdrhr rknsrsrsrd rqrrhrsrsw
      121 drrhssesrs qdwrredrvh yrspplatgr rygnsksphf rekspvrepv dnlspeerda
      181 rtvfcmqlaa rirprdledf fsavgkvrdv riisdrnsrr skgiayvefc eiqsvplaig
      241 ltgqrllgvp iivqasqaek nrlaamannl qkgsggpmrl yvgslhfnit edmlrgifep
      301 fgkidnivlm kdsetgrskg ygfitfsdse carraleqln gfelagrpmr ighvterpdg
      361 gtditfpdgd qeldlgsvgg rlqlmaklae gsgiqlpttt aaaaavaqaa aaqaaalqln
      421 gavplgalnp aaltalspal nlasqaiasq cfqlsslftp qtm
//
LOCUS       XP_061013743             463 aa            linear   MAM 02-DEC-2023
DEFINITION  probable RNA-binding protein 23 isoform X1 [Dama dama].
ACCESSION   XP_061013743
VERSION     XP_061013743.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157760.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..463
                     /product="probable RNA-binding protein 23 isoform X1"
                     /calculated_mol_wt=50766
     Region          76..462
                     /region_name="SF-CC1"
                     /note="splicing factor, CC1-like family; TIGR01622"
                     /db_xref="CDD:273721"
     CDS             1..463
                     /gene="RBM23"
                     /coded_by="XM_061157760.1:488..1879"
                     /db_xref="GeneID:133066562"
ORIGIN      
        1 masddfdivi eamleapykk eedeqqrkev kkdspsnmtn stsnigtsgc gtdgssvtdg
       61 tsatngngts geaskkkrsr shsksrerkc srsrdrdrhr rknsrsrsrd rqrrhrsrsw
      121 drrhssesrs qdwrredrvh yrspplatgr rygnsksphf rekspvrepv dnlspeerda
      181 rtvfcmqlaa rirprdledf fsavgkvrdv riisdrnsrr skgiayvefc eiqsvplaig
      241 ltgqrllgvp iivqasqaek nrlaamannl qkgsggpmrl yvgslhfnit edmlrgifep
      301 fgkidnivlm kdsetgrskg ygfitfsdse carraleqln gfelagrpmr ighvterpdg
      361 gtditfpdgd qeldlgsvgg rlqlmaklae gsgiqlpttt aaaaavaqaa aaqaaalqln
      421 gavplgalnp aaltalspal nlasqaiasq cfqlsslftp qtm
//
LOCUS       XP_061013744             463 aa            linear   MAM 02-DEC-2023
DEFINITION  probable RNA-binding protein 23 isoform X1 [Dama dama].
ACCESSION   XP_061013744
VERSION     XP_061013744.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157761.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..463
                     /product="probable RNA-binding protein 23 isoform X1"
                     /calculated_mol_wt=50766
     Region          76..462
                     /region_name="SF-CC1"
                     /note="splicing factor, CC1-like family; TIGR01622"
                     /db_xref="CDD:273721"
     CDS             1..463
                     /gene="RBM23"
                     /coded_by="XM_061157761.1:347..1738"
                     /db_xref="GeneID:133066562"
ORIGIN      
        1 masddfdivi eamleapykk eedeqqrkev kkdspsnmtn stsnigtsgc gtdgssvtdg
       61 tsatngngts geaskkkrsr shsksrerkc srsrdrdrhr rknsrsrsrd rqrrhrsrsw
      121 drrhssesrs qdwrredrvh yrspplatgr rygnsksphf rekspvrepv dnlspeerda
      181 rtvfcmqlaa rirprdledf fsavgkvrdv riisdrnsrr skgiayvefc eiqsvplaig
      241 ltgqrllgvp iivqasqaek nrlaamannl qkgsggpmrl yvgslhfnit edmlrgifep
      301 fgkidnivlm kdsetgrskg ygfitfsdse carraleqln gfelagrpmr ighvterpdg
      361 gtditfpdgd qeldlgsvgg rlqlmaklae gsgiqlpttt aaaaavaqaa aaqaaalqln
      421 gavplgalnp aaltalspal nlasqaiasq cfqlsslftp qtm
//
LOCUS       XP_061013745             463 aa            linear   MAM 02-DEC-2023
DEFINITION  probable RNA-binding protein 23 isoform X2 [Dama dama].
ACCESSION   XP_061013745
VERSION     XP_061013745.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157762.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..463
                     /product="probable RNA-binding protein 23 isoform X2"
                     /calculated_mol_wt=50766
     Region          76..462
                     /region_name="SF-CC1"
                     /note="splicing factor, CC1-like family; TIGR01622"
                     /db_xref="CDD:273721"
     CDS             1..463
                     /gene="RBM23"
                     /coded_by="XM_061157762.1:243..1634"
                     /db_xref="GeneID:133066562"
ORIGIN      
        1 masddfdivi eamleapykk eedeqqrkev kkdspsnmtn stsnigtsgc gtdgssvtdg
       61 tsatngngts geaskkkrsr shsksrerkc srsrdrdrhr rknsrsrsrd rqrrhrsrsw
      121 drrhssesrs qdwrredrvh yrspplatgr rygnsksphf rekspvrepv dnlspeerda
      181 rtvfcmqlaa rirprdledf fsavgkvrdv riisdrnsrr skgiayvefc eiqsvplaig
      241 ltgqrllgvp iivqasqaek nrlaamannl qkgsggpmrl yvgslhfnit edmlrgifep
      301 fgkidnivlm kdsetgrskg ygfitfsdse carraleqln gfelagrpmr ighvterpdg
      361 gtditfpdgd qeldlgsvgg rlqlmaklae gsgiqlpttt aaaaavaqaa aaqaaalqln
      421 gavplgalnp aaltalspal nlasqaiasq cfqlsslftp qtm
//
LOCUS       XP_061013746             447 aa            linear   MAM 02-DEC-2023
DEFINITION  probable RNA-binding protein 23 isoform X3 [Dama dama].
ACCESSION   XP_061013746
VERSION     XP_061013746.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157763.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..447
                     /product="probable RNA-binding protein 23 isoform X3"
                     /calculated_mol_wt=48810
     Region          84..446
                     /region_name="SF-CC1"
                     /note="splicing factor, CC1-like family; TIGR01622"
                     /db_xref="CDD:273721"
     CDS             1..447
                     /gene="RBM23"
                     /coded_by="XM_061157763.1:244..1587"
                     /db_xref="GeneID:133066562"
ORIGIN      
        1 masddfdivi eamleapykk eedeqqrkev kkdspsnmtn stsnigtsgc gtdgssvtdg
       61 tsatngngts geasnrsrdr drhrrknsrs rsrdrqrrhr srswdrrhss esrsqdwrre
      121 drvhyrsppl atgrrygnsk sphfrekspv repvdnlspe erdartvfcm qlaarirprd
      181 ledffsavgk vrdvriisdr nsrrskgiay vefceiqsvp laigltgqrl lgvpiivqas
      241 qaeknrlaam annlqkgsgg pmrlyvgslh fnitedmlrg ifepfgkidn ivlmkdsetg
      301 rskgygfitf sdsecarral eqlngfelag rpmrighvte rpdggtditf pdgdqeldlg
      361 svggrlqlma klaegsgiql ptttaaaaav aqaaaaqaaa lqlngavplg alnpaaltal
      421 spalnlasqa iasqcfqlss lftpqtm
//
LOCUS       XP_061013747             447 aa            linear   MAM 02-DEC-2023
DEFINITION  probable RNA-binding protein 23 isoform X4 [Dama dama].
ACCESSION   XP_061013747
VERSION     XP_061013747.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157764.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..447
                     /product="probable RNA-binding protein 23 isoform X4"
                     /calculated_mol_wt=48810
     Region          84..446
                     /region_name="SF-CC1"
                     /note="splicing factor, CC1-like family; TIGR01622"
                     /db_xref="CDD:273721"
     CDS             1..447
                     /gene="RBM23"
                     /coded_by="XM_061157764.1:244..1587"
                     /db_xref="GeneID:133066562"
ORIGIN      
        1 masddfdivi eamleapykk eedeqqrkev kkdspsnmtn stsnigtsgc gtdgssvtdg
       61 tsatngngts geasnrsrdr drhrrknsrs rsrdrqrrhr srswdrrhss esrsqdwrre
      121 drvhyrsppl atgrrygnsk sphfrekspv repvdnlspe erdartvfcm qlaarirprd
      181 ledffsavgk vrdvriisdr nsrrskgiay vefceiqsvp laigltgqrl lgvpiivqas
      241 qaeknrlaam annlqkgsgg pmrlyvgslh fnitedmlrg ifepfgkidn ivlmkdsetg
      301 rskgygfitf sdsecarral eqlngfelag rpmrighvte rpdggtditf pdgdqeldlg
      361 svggrlqlma klaegsgiql ptttaaaaav aqaaaaqaaa lqlngavplg alnpaaltal
      421 spalnlasqa iasqcfqlss lftpqtm
//
LOCUS       XP_061013748             437 aa            linear   MAM 02-DEC-2023
DEFINITION  mitochondrial inner membrane protein OXA1L [Dama dama].
ACCESSION   XP_061013748
VERSION     XP_061013748.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157765.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..437
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..437
                     /product="mitochondrial inner membrane protein OXA1L"
                     /calculated_mol_wt=48674
     Region          137..336
                     /region_name="5TM_Oxa1-like"
                     /note="Five transmembrane core domain of mitochondrial
                     inner membrane protein Oxa1 and similar proteins; cd20069"
                     /db_xref="CDD:410993"
     CDS             1..437
                     /gene="OXA1L"
                     /coded_by="XM_061157765.1:80..1393"
                     /db_xref="GeneID:133066564"
ORIGIN      
        1 malalmcgrr ellrllwpqr qfhsvagpcq wprkpltagl gfpadrcrgh pryvllmapg
       61 prglstsvvs faeaqvpapp vipatpppta vpevasgeaa dviqavaeqs faelglgsyt
      121 pvgliqnlle fmhvnlglpw wgaiatctvl arclvfpliv kgqreaakih nhlpeiqkfs
      181 arireakltg nhtefyrass emtfyqkkhd iklfrplilp ltqapifisf fialremanl
      241 pvpslqtggl wwfqdltlsd piyvlplvvt atmwavlelg aetgmqssdi qwmrnfirlm
      301 plavlpitvh fptavfmywl ssnmfslgqv aclripavrt vlkipqrvvh dpdklppreg
      361 fiksfrqgwk naemahqlqe rerrmqnhle laargplrqt fahnpllphg kndppnapss
      421 sssskakskq pwrdtlg
//
LOCUS       XP_061013749             421 aa            linear   MAM 02-DEC-2023
DEFINITION  GTP-binding protein REM 2 isoform X1 [Dama dama].
ACCESSION   XP_061013749
VERSION     XP_061013749.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157766.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..421
                     /product="GTP-binding protein REM 2 isoform X1"
                     /calculated_mol_wt=45912
     Region          115..421
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            121..128
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206648"
     Site            order(123..129,172,274..275,277,340..342)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206648"
     Site            145
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            150..152
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            169..172
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            order(171..172,195..196)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     Site            274..277
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            340..342
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     CDS             1..421
                     /gene="REM2"
                     /coded_by="XM_061157766.1:3551..4816"
                     /db_xref="GeneID:133066565"
ORIGIN      
        1 mhsdldtdmd tdtettalcp ssshrasppe tptpeadatl lkkpekllag ldwgrpppap
       61 gaprrrgsmp vpykhqlrra qavdeldwpp qasssgssds lgsgeaaptq kdgifkvmlv
      121 gesgvgkstl agtfgglqgd sahelenped tykrrimvdk eevtlvvydi weqsptdeas
      181 pkfqrpyfgs glegptticl sslletrvtw papgrshwra llpfqvhkta igprlradfq
      241 cphlgletls slpltssegp flppfphhqr pptdpclfpl ckrltcpnpf slhaleppgp
      301 asphpwpsaa qweggrlkrs lpaegrhlag tlsckhiets aalhhntrel fegavrqirl
      361 rrgrdgaggp rpewgspegp apparreslt kkakrflanl vprnakffkq rsrschdlsv
      421 l
//
LOCUS       XP_061013750             415 aa            linear   MAM 02-DEC-2023
DEFINITION  GTP-binding protein REM 2 isoform X2 [Dama dama].
ACCESSION   XP_061013750
VERSION     XP_061013750.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157767.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..415
                     /product="GTP-binding protein REM 2 isoform X2"
                     /calculated_mol_wt=45242
     Region          115..415
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            121..128
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206648"
     Site            order(123..129,172,268..269,271,334..336)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206648"
     Site            145
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            150..152
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            169..172
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            order(171..172,195..196)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     Site            268..271
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            334..336
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     CDS             1..415
                     /gene="REM2"
                     /coded_by="XM_061157767.1:3551..4798"
                     /db_xref="GeneID:133066565"
ORIGIN      
        1 mhsdldtdmd tdtettalcp ssshrasppe tptpeadatl lkkpekllag ldwgrpppap
       61 gaprrrgsmp vpykhqlrra qavdeldwpp qasssgssds lgsgeaaptq kdgifkvmlv
      121 gesgvgkstl agtfgglqgd sahelenped tykrrimvdk eevtlvvydi weqsptdeas
      181 pkfqrpyfgs glegptticl sslletrvtw papgrshwrv hktaigprlr adfqcphlgl
      241 etlsslplts segpflppfp hhqrpptdpc lfplckrltc pnpfslhale ppgpasphpw
      301 psaaqweggr lkrslpaegr hlagtlsckh ietsaalhhn trelfegavr qirlrrgrdg
      361 aggprpewgs pegpapparr esltkkakrf lanlvprnak ffkqrsrsch dlsvl
//
LOCUS       XP_061013751             354 aa            linear   MAM 02-DEC-2023
DEFINITION  GTP-binding protein REM 2 isoform X3 [Dama dama].
ACCESSION   XP_061013751
VERSION     XP_061013751.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157768.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..354
                     /product="GTP-binding protein REM 2 isoform X3"
                     /calculated_mol_wt=37878
     Region          115..>249
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            121..128
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206648"
     Site            145
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            150..152
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            169..172
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            order(171..172,189..190)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     Site            229..232
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     CDS             1..354
                     /gene="REM2"
                     /coded_by="XM_061157768.1:3551..4615"
                     /db_xref="GeneID:133066565"
ORIGIN      
        1 mhsdldtdmd tdtettalcp ssshrasppe tptpeadatl lkkpekllag ldwgrpppap
       61 gaprrrgsmp vpykhqlrra qavdeldwpp qasssgssds lgsgeaaptq kdgifkvmlv
      121 gesgvgkstl agtfgglqgd sahelenped tykrrimvdk eevtlvvydi weqgdaggwl
      181 rdhclqtgda flivfsvtdr rsfskvpetl lrlragrphh dlpvilvgnk sdlarsrevs
      241 leaprsslap slaqrspvgg rapeevpscr gppsgrdtel qahrdvgraa pqhegalrrs
      301 gapdpaaarp gwrrgpaarv gqprgprsar asrephqegq alpcqpgaaq rqvl
//
LOCUS       XP_061013752             344 aa            linear   MAM 02-DEC-2023
DEFINITION  GTP-binding protein REM 2 isoform X4 [Dama dama].
ACCESSION   XP_061013752
VERSION     XP_061013752.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157769.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..344
                     /product="GTP-binding protein REM 2 isoform X4"
                     /calculated_mol_wt=37381
     Region          115..344
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            121..128
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206648"
     Site            order(123..129,172,223..224,226,263..265)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206648"
     Site            145
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            150..152
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            169..172
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            223..226
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            263..265
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     CDS             1..344
                     /gene="REM2"
                     /coded_by="XM_061157769.1:3551..4585"
                     /db_xref="GeneID:133066565"
ORIGIN      
        1 mhsdldtdmd tdtettalcp ssshrasppe tptpeadatl lkkpekllag ldwgrpppap
       61 gaprrrgsmp vpykhqlrra qavdeldwpp qasssgssds lgsgeaaptq kdgifkvmlv
      121 gesgvgkstl agtfgglqgd sahelenped tykrrimvdk eevtlvvydi weqsptdeas
      181 pkfqrpyfgs glegptticl sslletrvtw papgrshwrp pgpasphpwp saaqweggrl
      241 krslpaegrh lagtlsckhi etsaalhhnt relfegavrq irlrrgrdga ggprpewgsp
      301 egpapparre sltkkakrfl anlvprnakf fkqrsrschd lsvl
//
LOCUS       XP_061013753             340 aa            linear   MAM 02-DEC-2023
DEFINITION  GTP-binding protein REM 2 isoform X5 [Dama dama].
ACCESSION   XP_061013753
VERSION     XP_061013753.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157770.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..340
                     /product="GTP-binding protein REM 2 isoform X5"
                     /calculated_mol_wt=37116
     Region          115..340
                     /region_name="RGK"
                     /note="Rem, Rem2, Rad, Gem/Kir (RGK) subfamily of Ras
                     GTPases; cd04148"
                     /db_xref="CDD:206715"
     Site            121..128
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206715"
     Site            order(122..123,171..172)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206715"
     Site            order(123..129,169,172,229..230,232,259..260)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206715"
     Site            order(128..129,141,143,152..153,166..167,169,171..172,261)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206715"
     Site            order(142..143,150..153)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206715"
     Site            order(142..147,149..152)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206715"
     Site            144
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206715"
     Site            169..172
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206715"
     Site            order(171..172,181..184,187..190)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206715"
     Site            229..232
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206715"
     Site            259..261
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206715"
     Site            334..337
                     /site_type="other"
                     /note="putative lipid modification site [posttranslational
                     modification]"
                     /db_xref="CDD:206715"
     CDS             1..340
                     /gene="REM2"
                     /coded_by="XM_061157770.1:3551..4573"
                     /db_xref="GeneID:133066565"
ORIGIN      
        1 mhsdldtdmd tdtettalcp ssshrasppe tptpeadatl lkkpekllag ldwgrpppap
       61 gaprrrgsmp vpykhqlrra qavdeldwpp qasssgssds lgsgeaaptq kdgifkvmlv
      121 gesgvgkstl agtfgglqgd sahelenped tykrrimvdk eevtlvvydi weqgdaggwl
      181 rdhclqtgda flivfsvtdr rsfskvpetl lrlragrphh dlpvilvgnk sdlarsrevs
      241 leegrhlagt lsckhietsa alhhntrelf egavrqirlr rgrdgaggpr pewgspegpa
      301 pparresltk kakrflanlv prnakffkqr srschdlsvl
//
LOCUS       XP_061013754             355 aa            linear   MAM 02-DEC-2023
DEFINITION  (Lyso)-N-acylphosphatidylethanolamine lipase isoform X1 [Dama
            dama].
ACCESSION   XP_061013754
VERSION     XP_061013754.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157771.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..355
                     /product="(Lyso)-N-acylphosphatidylethanolamine lipase
                     isoform X1"
                     /calculated_mol_wt=40162
     Region          24..351
                     /region_name="PLN02894"
                     /note="hydrolase, alpha/beta fold family protein"
                     /db_xref="CDD:215484"
     CDS             1..355
                     /gene="ABHD4"
                     /coded_by="XM_061157771.1:80..1147"
                     /db_xref="GeneID:133066567"
ORIGIN      
        1 mgwlsstrqg lftmaddldq qpqgwlsswl ptwrptsmsq lknvearilq clqnkflary
       61 vslpnqnkiw tvtvspelrd rtplvmvhgf gggvglwiln mdslstrrtl htfdllgfgr
      121 ssrptfprdp egaedefvts ietwresmgi psmillghsl ggflatsysi kypdrvkhli
      181 lvdpwgfplr ptdpsqirap ptwvkavasv lgrsnplavl rvagpwgpgl vqrfrpdfkr
      241 kfadffdddt iseyiyhcna qnpsgetafk ammesfgwar rpmlerihli rkdvpitmiy
      301 gantwidtst gkkvklqrpd syvrdleieg ashhvyadqp hifnavveei cdsvd
//
LOCUS       XP_061013755             327 aa            linear   MAM 02-DEC-2023
DEFINITION  (Lyso)-N-acylphosphatidylethanolamine lipase isoform X2 [Dama
            dama].
ACCESSION   XP_061013755
VERSION     XP_061013755.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157772.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..327
                     /product="(Lyso)-N-acylphosphatidylethanolamine lipase
                     isoform X2"
                     /calculated_mol_wt=37103
     Region          24..324
                     /region_name="PLN02894"
                     /note="hydrolase, alpha/beta fold family protein"
                     /db_xref="CDD:215484"
     CDS             1..327
                     /gene="ABHD4"
                     /coded_by="XM_061157772.1:80..1063"
                     /db_xref="GeneID:133066567"
ORIGIN      
        1 mgwlsstrqg lftmaddldq qpqgwlsswl ptwrptsmsq lknvearilq clqnkflary
       61 vslpnqnkiw tvtvspelrd rtplvmvhgf gggvglwiln mdslstrrtl htfdllgfgr
      121 ssrptfprdp egaedefvts ietwresmgi psmillghsl ggflatsysi kypdrvkhli
      181 lvdpwgfplr ptdpsqirap ptwvkavasv lgrsnplavl rvagpwgpgl vqrfrpdfkr
      241 kfadffdddt iseyiyhcna qnpsgetafk ammesfgwar rpmlerihli rkdvpitmiy
      301 gantwidtst gkkvklqrpd syvrdlf
//
LOCUS       XP_061013756             150 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein mL52 isoform X1 [Dama dama].
ACCESSION   XP_061013756
VERSION     XP_061013756.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157773.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..150
                     /product="large ribosomal subunit protein mL52 isoform X1"
                     /calculated_mol_wt=16682
     Region          50..140
                     /region_name="MRPL52"
                     /note="Mitoribosomal protein mL52; pfam18699"
                     /db_xref="CDD:465836"
     CDS             1..150
                     /gene="MRPL52"
                     /coded_by="XM_061157773.1:659..1111"
                     /db_xref="GeneID:133066569"
ORIGIN      
        1 matscfprsv argqrghayf rllrlsmaal gillstgvrr lhcgaaarag sqwrlrqgla
       61 anpsgygplt elpdwsyadg rpappmkgql rrkaqrekfa rrvvllsqem daglqawqlr
      121 qqeklqeekr kqqnalkpkg allqnprpsq
//
LOCUS       XP_061013758             149 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein mL52 isoform X2 [Dama dama].
ACCESSION   XP_061013758
VERSION     XP_061013758.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157775.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..149
                     /product="large ribosomal subunit protein mL52 isoform X2"
                     /calculated_mol_wt=16611
     Region          49..139
                     /region_name="MRPL52"
                     /note="Mitoribosomal protein mL52; pfam18699"
                     /db_xref="CDD:465836"
     CDS             1..149
                     /gene="MRPL52"
                     /coded_by="XM_061157775.1:671..1120"
                     /db_xref="GeneID:133066569"
ORIGIN      
        1 matscfprsv argqrghayf rllrlsmaal gillssvrrl hcgaaarags qwrlrqglaa
       61 npsgygplte lpdwsyadgr pappmkgqlr rkaqrekfar rvvllsqemd aglqawqlrq
      121 qeklqeekrk qqnalkpkga llqnprpsq
//
LOCUS       XP_061013759             137 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein mL52 isoform X3 [Dama dama].
ACCESSION   XP_061013759
VERSION     XP_061013759.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157776.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..137
                     /product="large ribosomal subunit protein mL52 isoform X3"
                     /calculated_mol_wt=14522
     Region          49..>99
                     /region_name="MRPL52"
                     /note="Mitoribosomal protein mL52; pfam18699"
                     /db_xref="CDD:465836"
     CDS             1..137
                     /gene="MRPL52"
                     /coded_by="XM_061157776.1:1250..1663"
                     /db_xref="GeneID:133066569"
ORIGIN      
        1 matscfprsv argqrghayf rllrlsmaal gillssvrrl hcgaaarags qwrlrqglaa
       61 npsgygplte lpdwsyadgr pappmkgqlr rkaqrekfav setsctavtg ngcwitgmaa
      121 qtagevagrk keaaecs
//
LOCUS       XP_061013760             114 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein mL52 isoform X4 [Dama dama].
ACCESSION   XP_061013760
VERSION     XP_061013760.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157777.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..114
                     /product="large ribosomal subunit protein mL52 isoform X4"
                     /calculated_mol_wt=11887
     Region          <29..>105
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Region          50..>78
                     /region_name="MRPL52"
                     /note="Mitoribosomal protein mL52; pfam18699"
                     /db_xref="CDD:465836"
     CDS             1..114
                     /gene="MRPL52"
                     /coded_by="XM_061157777.1:2241..2585"
                     /db_xref="GeneID:133066569"
ORIGIN      
        1 matscfprsv argqrghayf rllrlsmaal gillstgvrr lhcgaaarag sqwrlrqgla
       61 anpsgygplt elpdwsyaet sctavtgngc witgmaaqta gevagrkkea aecs
//
LOCUS       XP_061013761             363 aa            linear   MAM 02-DEC-2023
DEFINITION  HAUS augmin-like complex subunit 4 [Dama dama].
ACCESSION   XP_061013761
VERSION     XP_061013761.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157778.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..363
                     /product="HAUS augmin-like complex subunit 4"
                     /calculated_mol_wt=42138
     Region          127..360
                     /region_name="HAUS4"
                     /note="HAUS augmin-like complex subunit 4; pfam14735"
                     /db_xref="CDD:464287"
     CDS             1..363
                     /gene="HAUS4"
                     /coded_by="XM_061157778.1:196..1287"
                     /db_xref="GeneID:133066571"
ORIGIN      
        1 masgdfclpg egmevlqqvc skqlppcnls eedllqnphf sqlllslsqh vdesglsltl
       61 akeqarawkd vrlhkttwlr seilqrviqe llvdyyvkaq dtdltsedrk fhetleqrll
      121 vteltrllgp sqerevppll glekadllel mppsedfvwm rarlplevee qlkkkcftvl
      181 cyhnpssdld setlkaakvw nlaevlagek qqcqaaksqq keqmvllekk satysqvllr
      241 clallqrllq ehrlktqsel drinaqylei kcsamilklr meelkilsdt ytaekvevhr
      301 lirdrlegai rlqeqdmeks rqvlntyevl geefdklvke ytqlkqaten rrwtlqefnk
      361 ayr
//
LOCUS       XP_061013762             363 aa            linear   MAM 02-DEC-2023
DEFINITION  HAUS augmin-like complex subunit 4 [Dama dama].
ACCESSION   XP_061013762
VERSION     XP_061013762.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157779.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..363
                     /product="HAUS augmin-like complex subunit 4"
                     /calculated_mol_wt=42138
     Region          127..360
                     /region_name="HAUS4"
                     /note="HAUS augmin-like complex subunit 4; pfam14735"
                     /db_xref="CDD:464287"
     CDS             1..363
                     /gene="HAUS4"
                     /coded_by="XM_061157779.1:196..1287"
                     /db_xref="GeneID:133066571"
ORIGIN      
        1 masgdfclpg egmevlqqvc skqlppcnls eedllqnphf sqlllslsqh vdesglsltl
       61 akeqarawkd vrlhkttwlr seilqrviqe llvdyyvkaq dtdltsedrk fhetleqrll
      121 vteltrllgp sqerevppll glekadllel mppsedfvwm rarlplevee qlkkkcftvl
      181 cyhnpssdld setlkaakvw nlaevlagek qqcqaaksqq keqmvllekk satysqvllr
      241 clallqrllq ehrlktqsel drinaqylei kcsamilklr meelkilsdt ytaekvevhr
      301 lirdrlegai rlqeqdmeks rqvlntyevl geefdklvke ytqlkqaten rrwtlqefnk
      361 ayr
//
LOCUS       XP_061013763             363 aa            linear   MAM 02-DEC-2023
DEFINITION  HAUS augmin-like complex subunit 4 [Dama dama].
ACCESSION   XP_061013763
VERSION     XP_061013763.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157780.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..363
                     /product="HAUS augmin-like complex subunit 4"
                     /calculated_mol_wt=42138
     Region          127..360
                     /region_name="HAUS4"
                     /note="HAUS augmin-like complex subunit 4; pfam14735"
                     /db_xref="CDD:464287"
     CDS             1..363
                     /gene="HAUS4"
                     /coded_by="XM_061157780.1:160..1251"
                     /db_xref="GeneID:133066571"
ORIGIN      
        1 masgdfclpg egmevlqqvc skqlppcnls eedllqnphf sqlllslsqh vdesglsltl
       61 akeqarawkd vrlhkttwlr seilqrviqe llvdyyvkaq dtdltsedrk fhetleqrll
      121 vteltrllgp sqerevppll glekadllel mppsedfvwm rarlplevee qlkkkcftvl
      181 cyhnpssdld setlkaakvw nlaevlagek qqcqaaksqq keqmvllekk satysqvllr
      241 clallqrllq ehrlktqsel drinaqylei kcsamilklr meelkilsdt ytaekvevhr
      301 lirdrlegai rlqeqdmeks rqvlntyevl geefdklvke ytqlkqaten rrwtlqefnk
      361 ayr
//
LOCUS       XP_061013764             363 aa            linear   MAM 02-DEC-2023
DEFINITION  HAUS augmin-like complex subunit 4 [Dama dama].
ACCESSION   XP_061013764
VERSION     XP_061013764.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157781.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..363
                     /product="HAUS augmin-like complex subunit 4"
                     /calculated_mol_wt=42138
     Region          127..360
                     /region_name="HAUS4"
                     /note="HAUS augmin-like complex subunit 4; pfam14735"
                     /db_xref="CDD:464287"
     CDS             1..363
                     /gene="HAUS4"
                     /coded_by="XM_061157781.1:123..1214"
                     /db_xref="GeneID:133066571"
ORIGIN      
        1 masgdfclpg egmevlqqvc skqlppcnls eedllqnphf sqlllslsqh vdesglsltl
       61 akeqarawkd vrlhkttwlr seilqrviqe llvdyyvkaq dtdltsedrk fhetleqrll
      121 vteltrllgp sqerevppll glekadllel mppsedfvwm rarlplevee qlkkkcftvl
      181 cyhnpssdld setlkaakvw nlaevlagek qqcqaaksqq keqmvllekk satysqvllr
      241 clallqrllq ehrlktqsel drinaqylei kcsamilklr meelkilsdt ytaekvevhr
      301 lirdrlegai rlqeqdmeks rqvlntyevl geefdklvke ytqlkqaten rrwtlqefnk
      361 ayr
//
LOCUS       XP_061013765             637 aa            linear   MAM 02-DEC-2023
DEFINITION  protein arginine N-methyltransferase 5 isoform X1 [Dama dama].
ACCESSION   XP_061013765
VERSION     XP_061013765.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157782.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..637
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..637
                     /product="protein arginine N-methyltransferase 5 isoform
                     X1"
                     /calculated_mol_wt=72456
     Region          37..290
                     /region_name="PRMT5_TIM"
                     /note="PRMT5 TIM barrel domain; pfam17285"
                     /db_xref="CDD:435840"
     Region          295..464
                     /region_name="PRMT5"
                     /note="PRMT5 arginine-N-methyltransferase; pfam05185"
                     /db_xref="CDD:428356"
     Region          468..635
                     /region_name="PRMT5_C"
                     /note="PRMT5 oligomerization domain; pfam17286"
                     /db_xref="CDD:435841"
     CDS             1..637
                     /gene="PRMT5"
                     /coded_by="XM_061157782.1:47..1960"
                     /db_xref="GeneID:133066572"
ORIGIN      
        1 maamavggag gsrvssgrdl ncvpeiadtl gavakqgfdf lcmpvfhprf kreftqepak
       61 srpgpqtrsd lllsgrdwnt livgklspwi rpdskvekir rnseaamlqe lnfgaylglp
      121 afllplnqed ntnlarvltn hihtghhssm fwmrvplvap edlrddiien aptshtaeys
      181 geektwmwwh nfrtlcdysk riavaleiga dlpsnhvidr wlgepikaai lptsifltnk
      241 kgfpvlskmh qrlifrllkl evqfiitgtn hhsekefcsy lqyleylsqn rpppnayelf
      301 akgyedylqs plqplmdnle sqtyevfekd pikysqyqqa iykclldrvp eeekdtniqv
      361 lmvlgagrgp lvnaslraak qadrriklya veknpnavvt lenwqfeewg sqvtvvssdm
      421 rewvapekad iivsellgsf adnelspecl dgaqhflkdd gvsipgeyts flapissskl
      481 ynevracrek drdpeaqfem pyvvrlhnfh qlsapqpcft fshpnrdpmi dnnryctlef
      541 pvevntvlhg fagyfetvly qditlsirpe thspgmfswf pilfpikqpi tvregqticv
      601 rfwrcsnskk vwyewavtap vcsaihnptg rsytigl
//
LOCUS       XP_061013766             595 aa            linear   MAM 02-DEC-2023
DEFINITION  protein arginine N-methyltransferase 5 isoform X2 [Dama dama].
ACCESSION   XP_061013766
VERSION     XP_061013766.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157783.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..595
                     /product="protein arginine N-methyltransferase 5 isoform
                     X2"
                     /calculated_mol_wt=68330
     Region          1..248
                     /region_name="PRMT5_TIM"
                     /note="PRMT5 TIM barrel domain; pfam17285"
                     /db_xref="CDD:435840"
     Region          253..422
                     /region_name="PRMT5"
                     /note="PRMT5 arginine-N-methyltransferase; pfam05185"
                     /db_xref="CDD:428356"
     Region          426..593
                     /region_name="PRMT5_C"
                     /note="PRMT5 oligomerization domain; pfam17286"
                     /db_xref="CDD:435841"
     CDS             1..595
                     /gene="PRMT5"
                     /coded_by="XM_061157783.1:141..1928"
                     /db_xref="GeneID:133066572"
ORIGIN      
        1 mpvfhprfkr eftqepaksr pgpqtrsdll lsgrdwntli vgklspwirp dskvekirrn
       61 seaamlqeln fgaylglpaf llplnqednt nlarvltnhi htghhssmfw mrvplvaped
      121 lrddiienap tshtaeysge ektwmwwhnf rtlcdyskri avaleigadl psnhvidrwl
      181 gepikaailp tsifltnkkg fpvlskmhqr lifrllklev qfiitgtnhh sekefcsylq
      241 yleylsqnrp ppnayelfak gyedylqspl qplmdnlesq tyevfekdpi kysqyqqaiy
      301 kclldrvpee ekdtniqvlm vlgagrgplv naslraakqa drriklyave knpnavvtle
      361 nwqfeewgsq vtvvssdmre wvapekadii vsellgsfad nelspecldg aqhflkddgv
      421 sipgeytsfl apisssklyn evracrekdr dpeaqfempy vvrlhnfhql sapqpcftfs
      481 hpnrdpmidn nryctlefpv evntvlhgfa gyfetvlyqd itlsirpeth spgmfswfpi
      541 lfpikqpitv regqticvrf wrcsnskkvw yewavtapvc saihnptgrs ytigl
//
LOCUS       XP_061013767             531 aa            linear   MAM 02-DEC-2023
DEFINITION  protein arginine N-methyltransferase 5 isoform X3 [Dama dama].
ACCESSION   XP_061013767
VERSION     XP_061013767.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157784.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..531
                     /product="protein arginine N-methyltransferase 5 isoform
                     X3"
                     /calculated_mol_wt=60919
     Region          <1..184
                     /region_name="PRMT5_TIM"
                     /note="PRMT5 TIM barrel domain; pfam17285"
                     /db_xref="CDD:435840"
     Region          189..358
                     /region_name="PRMT5"
                     /note="PRMT5 arginine-N-methyltransferase; pfam05185"
                     /db_xref="CDD:428356"
     Region          362..529
                     /region_name="PRMT5_C"
                     /note="PRMT5 oligomerization domain; pfam17286"
                     /db_xref="CDD:435841"
     CDS             1..531
                     /gene="PRMT5"
                     /coded_by="XM_061157784.1:208..1803"
                     /db_xref="GeneID:133066572"
ORIGIN      
        1 mlqelnfgay lglpafllpl nqedntnlar vltnhihtgh hssmfwmrvp lvapedlrdd
       61 iienaptsht aeysgeektw mwwhnfrtlc dyskriaval eigadlpsnh vidrwlgepi
      121 kaailptsif ltnkkgfpvl skmhqrlifr llklevqfii tgtnhhseke fcsylqyley
      181 lsqnrpppna yelfakgyed ylqsplqplm dnlesqtyev fekdpikysq yqqaiykcll
      241 drvpeeekdt niqvlmvlga grgplvnasl raakqadrri klyaveknpn avvtlenwqf
      301 eewgsqvtvv ssdmrewvap ekadiivsel lgsfadnels pecldgaqhf lkddgvsipg
      361 eytsflapis ssklynevra crekdrdpea qfempyvvrl hnfhqlsapq pcftfshpnr
      421 dpmidnnryc tlefpvevnt vlhgfagyfe tvlyqditls irpethspgm fswfpilfpi
      481 kqpitvregq ticvrfwrcs nskkvwyewa vtapvcsaih nptgrsytig l
//
LOCUS       XP_061013768             548 aa            linear   MAM 02-DEC-2023
DEFINITION  LIM domain-containing protein ajuba [Dama dama].
ACCESSION   XP_061013768
VERSION     XP_061013768.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157785.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..548
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..548
                     /product="LIM domain-containing protein ajuba"
                     /calculated_mol_wt=57674
     Region          348..401
                     /region_name="LIM1_Ajuba_like"
                     /note="The first LIM domain of Ajuba-like proteins;
                     cd09352"
                     /db_xref="CDD:188738"
     Site            order(348,351,370,373,376,379,397,400)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188738"
     Region          413..465
                     /region_name="LIM2_Ajuba_like"
                     /note="The second LIM domain of Ajuba-like proteins;
                     cd09355"
                     /db_xref="CDD:188741"
     Site            order(413,416,433,436,439,442,461,464)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188741"
     Region          473..534
                     /region_name="LIM3_Ajuba_like"
                     /note="The third LIM domain of Ajuba-like proteins;
                     cd09438"
                     /db_xref="CDD:188822"
     Site            order(473,476,500,503,506,509,530,533)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188822"
     CDS             1..548
                     /gene="AJUBA"
                     /coded_by="XM_061157785.1:353..1999"
                     /db_xref="GeneID:133066574"
ORIGIN      
        1 merlgekasr lleklrlsds gsakfgrrkg essrsgsdgt pgpgkgrlsg lggprksgpr
       61 gaaggpgdep lepareqgpl daernprgsf evpryegsfp ggpppsralp lpqslppdfr
      121 lettapalsp rssfasssas daskpssprg sllldgagag gaggsrpcsn rtsgismgyd
      181 qrhgsplpag pclfgpplag vpagyssggv psaypelhaa ldrlcahrpa gfgcqesrhs
      241 yppalgspga lagagvgatg plerrgaqpg rhsvtgygdc aagaryqdel tallrltvgt
      301 ggreagvrge sagietpgle eppgafvpea ararirepes redyfgtcik cnkgiygqsn
      361 acqaldslyh tqcfvccscg rtlrckafys vngsvyceed ylfsgfqeaa ekccvcghli
      421 lekilqamgk syhpgcfrci vcnkcldgip ftvdfsnqvy cvtdyhksya pkcaacgqpi
      481 lpsegcediv rvismdrdyh fecyhcedcr mqlsdeegcc cfpldghllc hgchmqrlsa
      541 rqppanyi
//
LOCUS       XP_061013770             539 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C14orf93 homolog [Dama dama].
ACCESSION   XP_061013770
VERSION     XP_061013770.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157787.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..539
                     /product="uncharacterized protein C14orf93 homolog"
                     /calculated_mol_wt=58511
     Region          2..539
                     /region_name="DUF4616"
                     /note="Domain of unknown function (DUF4616); pfam15394"
                     /db_xref="CDD:464701"
     CDS             1..539
                     /gene="C12H14orf93"
                     /coded_by="XM_061157787.1:474..2093"
                     /db_xref="GeneID:133066576"
ORIGIN      
        1 msfsatilfs ppggsearcc ccacknetsg assgcqggnp ppstpitvtg hglavqsseq
       61 llhiiyqrvd kavglaeaal glarannell krlqeevgel rqgkvpatde dresrahssp
      121 leepgplkes pgeagravpa aeeecdsvgs gvqvvieelr qlgaasaggp gplgfpaaqr
      181 dvrlpgcalt agegppmlnp lvddyvaseg avqrvlvpay akqlspvtql aiqratsets
      241 pengtklppp hpedmlsaaa alegtleesg pggtgelrqs lgftaspcrt rgsgqknsrr
      301 krdlvlsklv hnvhnhitnd krfngsesik sswnisvvkf lleklkqelv tsphnytdke
      361 lkgacvayfl tkrreyrnsl npfkglkeke ekklrsrryr lfanrssimr hfgpedqrlw
      421 kdvteelmsd eedslnepgv wvarpprfra qrltqlcyhl danskhgtka nrvygppsdr
      481 lpsaeaqllp pelynpnfqe eedeggdeng pvspsfdqah ktccpdlnsf ieikvekde
//
LOCUS       XP_061013771             539 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C14orf93 homolog [Dama dama].
ACCESSION   XP_061013771
VERSION     XP_061013771.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157788.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..539
                     /product="uncharacterized protein C14orf93 homolog"
                     /calculated_mol_wt=58511
     Region          2..539
                     /region_name="DUF4616"
                     /note="Domain of unknown function (DUF4616); pfam15394"
                     /db_xref="CDD:464701"
     CDS             1..539
                     /gene="C12H14orf93"
                     /coded_by="XM_061157788.1:337..1956"
                     /db_xref="GeneID:133066576"
ORIGIN      
        1 msfsatilfs ppggsearcc ccacknetsg assgcqggnp ppstpitvtg hglavqsseq
       61 llhiiyqrvd kavglaeaal glarannell krlqeevgel rqgkvpatde dresrahssp
      121 leepgplkes pgeagravpa aeeecdsvgs gvqvvieelr qlgaasaggp gplgfpaaqr
      181 dvrlpgcalt agegppmlnp lvddyvaseg avqrvlvpay akqlspvtql aiqratsets
      241 pengtklppp hpedmlsaaa alegtleesg pggtgelrqs lgftaspcrt rgsgqknsrr
      301 krdlvlsklv hnvhnhitnd krfngsesik sswnisvvkf lleklkqelv tsphnytdke
      361 lkgacvayfl tkrreyrnsl npfkglkeke ekklrsrryr lfanrssimr hfgpedqrlw
      421 kdvteelmsd eedslnepgv wvarpprfra qrltqlcyhl danskhgtka nrvygppsdr
      481 lpsaeaqllp pelynpnfqe eedeggdeng pvspsfdqah ktccpdlnsf ieikvekde
//
LOCUS       XP_061013772             539 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C14orf93 homolog [Dama dama].
ACCESSION   XP_061013772
VERSION     XP_061013772.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157789.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..539
                     /product="uncharacterized protein C14orf93 homolog"
                     /calculated_mol_wt=58511
     Region          2..539
                     /region_name="DUF4616"
                     /note="Domain of unknown function (DUF4616); pfam15394"
                     /db_xref="CDD:464701"
     CDS             1..539
                     /gene="C12H14orf93"
                     /coded_by="XM_061157789.1:504..2123"
                     /db_xref="GeneID:133066576"
ORIGIN      
        1 msfsatilfs ppggsearcc ccacknetsg assgcqggnp ppstpitvtg hglavqsseq
       61 llhiiyqrvd kavglaeaal glarannell krlqeevgel rqgkvpatde dresrahssp
      121 leepgplkes pgeagravpa aeeecdsvgs gvqvvieelr qlgaasaggp gplgfpaaqr
      181 dvrlpgcalt agegppmlnp lvddyvaseg avqrvlvpay akqlspvtql aiqratsets
      241 pengtklppp hpedmlsaaa alegtleesg pggtgelrqs lgftaspcrt rgsgqknsrr
      301 krdlvlsklv hnvhnhitnd krfngsesik sswnisvvkf lleklkqelv tsphnytdke
      361 lkgacvayfl tkrreyrnsl npfkglkeke ekklrsrryr lfanrssimr hfgpedqrlw
      421 kdvteelmsd eedslnepgv wvarpprfra qrltqlcyhl danskhgtka nrvygppsdr
      481 lpsaeaqllp pelynpnfqe eedeggdeng pvspsfdqah ktccpdlnsf ieikvekde
//
LOCUS       XP_061013773             539 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C14orf93 homolog [Dama dama].
ACCESSION   XP_061013773
VERSION     XP_061013773.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157790.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..539
                     /product="uncharacterized protein C14orf93 homolog"
                     /calculated_mol_wt=58511
     Region          2..539
                     /region_name="DUF4616"
                     /note="Domain of unknown function (DUF4616); pfam15394"
                     /db_xref="CDD:464701"
     CDS             1..539
                     /gene="C12H14orf93"
                     /coded_by="XM_061157790.1:291..1910"
                     /db_xref="GeneID:133066576"
ORIGIN      
        1 msfsatilfs ppggsearcc ccacknetsg assgcqggnp ppstpitvtg hglavqsseq
       61 llhiiyqrvd kavglaeaal glarannell krlqeevgel rqgkvpatde dresrahssp
      121 leepgplkes pgeagravpa aeeecdsvgs gvqvvieelr qlgaasaggp gplgfpaaqr
      181 dvrlpgcalt agegppmlnp lvddyvaseg avqrvlvpay akqlspvtql aiqratsets
      241 pengtklppp hpedmlsaaa alegtleesg pggtgelrqs lgftaspcrt rgsgqknsrr
      301 krdlvlsklv hnvhnhitnd krfngsesik sswnisvvkf lleklkqelv tsphnytdke
      361 lkgacvayfl tkrreyrnsl npfkglkeke ekklrsrryr lfanrssimr hfgpedqrlw
      421 kdvteelmsd eedslnepgv wvarpprfra qrltqlcyhl danskhgtka nrvygppsdr
      481 lpsaeaqllp pelynpnfqe eedeggdeng pvspsfdqah ktccpdlnsf ieikvekde
//
LOCUS       XP_061013774             263 aa            linear   MAM 02-DEC-2023
DEFINITION  proteasome subunit beta type-5 [Dama dama].
ACCESSION   XP_061013774
VERSION     XP_061013774.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157791.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..263
                     /product="proteasome subunit beta type-5"
                     /calculated_mol_wt=28524
     Region          60..247
                     /region_name="proteasome_beta_type_5"
                     /note="proteasome beta type-5 subunit. The 20S proteasome,
                     multisubunit proteolytic complex, is the central enzyme of
                     nonlysosomal protein degradation in both the cytosol and
                     nucleus. It is composed of 28 subunits arranged as four
                     homoheptameric rings that...; cd03761"
                     /db_xref="CDD:239730"
     Site            order(60,76,78,92,189,226,229..230)
                     /site_type="active"
                     /db_xref="CDD:239730"
     Site            order(78,81,83..88,108,110,125,137,140..141,143..144,147,
                     150,174,176,178..181,184,192..193,195..196,199..201,217,
                     224..227,230..231)
                     /site_type="other"
                     /note="beta subunit interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239730"
     CDS             1..263
                     /gene="PSMB5"
                     /coded_by="XM_061157791.1:144..935"
                     /db_xref="GeneID:133066577"
ORIGIN      
        1 malasvlerp lpvnqrgffg lggradlldl gpgspsdgls laapswgvpe epriemlhgt
       61 ttlafkfrhg vivaadsrat agayiasqtv kkvieinpyl lgtmaggaad csfwerllar
      121 qcriyelrnk erisvaaask llanmvyqyk gmglsmgtmi cgwdkrgpgl yyvdsegnri
      181 sgatfsvgsg svyaygvmdr gysydlevee aydlarraiy qatyrdaysg gsvnlyhvre
      241 dgwirvssdn vadlhdkysg str
//
LOCUS       XP_061013775             781 aa            linear   MAM 02-DEC-2023
DEFINITION  cadherin-24 [Dama dama].
ACCESSION   XP_061013775
VERSION     XP_061013775.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157792.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..781
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..781
                     /product="cadherin-24"
                     /calculated_mol_wt=83941
     Site            order(56..57,108,110,142,144..145)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          70..148
                     /region_name="CA"
                     /note="Cadherin repeats; smart00112"
                     /db_xref="CDD:214520"
     Region          154..255
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(161..162,216,218,251,253..254)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          264..368
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          379..475
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(385..386,438,440,471,473..474)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          713..774
                     /region_name="CADH_Y-type_LIR"
                     /note="Cadherin, Y-type LIR-motif; pfam01049"
                     /db_xref="CDD:460041"
     CDS             1..781
                     /gene="CDH24"
                     /coded_by="XM_061157792.1:215..2560"
                     /db_xref="GeneID:133066578"
ORIGIN      
        1 mwglvrllla wlggwgcmgr laaparawag srgrpepsll rtrrswvwnq ffvieeyagp
       61 epvligklhs dvdrgegrtk ylltgegagt vfvideatgn ihvtksldre ekaqyvllaq
      121 avdrasnrpl eppsefiikv qdindnppif plgpyhatvp emsnvgtsvi qvtahdaddp
      181 sygnsaklvy tvldglpffs vdpqtgvvrt aipnmdretq eeflvviqak dmgghmggls
      241 gsttvtvtls dvndnppkfp qslyqfsvve tagpgtlvgr lraqdpdlgd nalmaysild
      301 gegseafsis tdsqgrdgll tvrkpldfet rrtysfrvea tntlidpayl rrgpfkdvas
      361 vrvavqdape ppaftqaayr lavpenkgpg tlvgqvsatd ldspaspiry silphsdler
      421 cfsiepedgs irtavpldre arvwhnltvl ateldssaqa srvqvaiqtl dendnapqla
      481 epydtfvcds aapgqliqvi raldrdevgn nsrvsfhgpl gpdanftvrd nqdgsaslll
      541 psrpapprqa pylvpielwd wgqpvlssta tvtvsvcrcr pdgsvascrp eaqlspagls
      601 tgallaivtc vgtllalvvl fvalrrqkqe almvleeedv reniitydde gggeedteaf
      661 disalqnpdg aappapgppa rrdvlpwara prqprppgpa dvaqllalrl readedpsvp
      721 pydsvqvygy egrgsscgsl sslgsgselg gapgpaepld dwgplfrtla elygakeppa
      781 p
//
LOCUS       XP_061013776             781 aa            linear   MAM 02-DEC-2023
DEFINITION  cadherin-24 [Dama dama].
ACCESSION   XP_061013776
VERSION     XP_061013776.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157793.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..781
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..781
                     /product="cadherin-24"
                     /calculated_mol_wt=83941
     Site            order(56..57,108,110,142,144..145)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          70..148
                     /region_name="CA"
                     /note="Cadherin repeats; smart00112"
                     /db_xref="CDD:214520"
     Region          154..255
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(161..162,216,218,251,253..254)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          264..368
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          379..475
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(385..386,438,440,471,473..474)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          713..774
                     /region_name="CADH_Y-type_LIR"
                     /note="Cadherin, Y-type LIR-motif; pfam01049"
                     /db_xref="CDD:460041"
     CDS             1..781
                     /gene="CDH24"
                     /coded_by="XM_061157793.1:262..2607"
                     /db_xref="GeneID:133066578"
ORIGIN      
        1 mwglvrllla wlggwgcmgr laaparawag srgrpepsll rtrrswvwnq ffvieeyagp
       61 epvligklhs dvdrgegrtk ylltgegagt vfvideatgn ihvtksldre ekaqyvllaq
      121 avdrasnrpl eppsefiikv qdindnppif plgpyhatvp emsnvgtsvi qvtahdaddp
      181 sygnsaklvy tvldglpffs vdpqtgvvrt aipnmdretq eeflvviqak dmgghmggls
      241 gsttvtvtls dvndnppkfp qslyqfsvve tagpgtlvgr lraqdpdlgd nalmaysild
      301 gegseafsis tdsqgrdgll tvrkpldfet rrtysfrvea tntlidpayl rrgpfkdvas
      361 vrvavqdape ppaftqaayr lavpenkgpg tlvgqvsatd ldspaspiry silphsdler
      421 cfsiepedgs irtavpldre arvwhnltvl ateldssaqa srvqvaiqtl dendnapqla
      481 epydtfvcds aapgqliqvi raldrdevgn nsrvsfhgpl gpdanftvrd nqdgsaslll
      541 psrpapprqa pylvpielwd wgqpvlssta tvtvsvcrcr pdgsvascrp eaqlspagls
      601 tgallaivtc vgtllalvvl fvalrrqkqe almvleeedv reniitydde gggeedteaf
      661 disalqnpdg aappapgppa rrdvlpwara prqprppgpa dvaqllalrl readedpsvp
      721 pydsvqvygy egrgsscgsl sslgsgselg gapgpaepld dwgplfrtla elygakeppa
      781 p
//
LOCUS       XP_061013777            1335 aa            linear   MAM 02-DEC-2023
DEFINITION  apoptotic chromatin condensation inducer in the nucleus isoform X1
            [Dama dama].
ACCESSION   XP_061013777
VERSION     XP_061013777.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157794.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1335
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1335
                     /product="apoptotic chromatin condensation inducer in the
                     nucleus isoform X1"
                     /calculated_mol_wt=150719
     Region          72..106
                     /region_name="SAP"
                     /note="Putative DNA-binding (bihelical) motif predicted to
                     be involved in chromosomal organisation; smart00513"
                     /db_xref="CDD:128789"
     Region          <210..442
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          <365..532
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          1005..1091
                     /region_name="RRM_ACINU"
                     /note="RNA recognition motif (RRM) found in apoptotic
                     chromatin condensation inducer in the nucleus (acinus) and
                     similar proteins; cd12432"
                     /db_xref="CDD:409866"
     Region          <1200..1230
                     /region_name="RSB_motif"
                     /note="RNSP1-SAP18 binding (RSB) motif; pfam16294"
                     /db_xref="CDD:465085"
     CDS             1..1335
                     /gene="ACIN1"
                     /coded_by="XM_061157794.1:1..4008"
                     /db_xref="GeneID:133066579"
ORIGIN      
        1 myrrkhpsts ggtrgvlsgn rgvdygsgqg qlgtfegrwr klpkmpeavg tdpstsrkma
       61 eleevtldgk plqalrvtdl kaaleqrgla ksgqksalvk rlkgalmlen lqkhstphaa
      121 fqpnsqigee msqnsfikqy lekqqellrq rlereareaa eleeasaese demihpegva
      181 sllppdfqss lerpelelsr hsprksasis eekgesddek prkgerrssr vrqaraakls
      241 ecsqaaeeee dqetpsrnlr vradrnlkae eeeeeeeeee eeeeeeddde gqksrdapil
      301 kqfkeegeei prvkveevtd erpqtirsqe qeglerggrv trsqeearrs hlarhqqeke
      361 mktasppeee ereikyskvl eekskspspp rltedvakpl vvlqpeqtas eeetpppllt
      421 keasspppnt qlqseeeiep megpappvli qlsppntdae arelllsqht vqlvgslspl
      481 sgpadtkves pvekvpeesv lplvqkstpa essaqkglet esekstqplp lkieeftlak
      541 giteealeqk egrrashall pshrlkqsad ssssrsssss ssssrsrsrs pdssgsqshs
      601 pprskqrdas gahahanprd rskvgsrsts esrsrsrsrs rsassnsrks lspgvsrdss
      661 tsytetkdps sgqevaappl pqlqvlepke rtstpssvqv rrvsqpepte khvtqrlqpd
      721 rgspkkceae eaeppaatqp qtsetptshl peserihhtv eekeevtmdt senrpenevp
      781 eppmpiadqv snddrpegna edeekkessl pksfkrkisv vsatkgvpag nsdteggqps
      841 rkrrwgasta ttqkkpsisi tteslkslip dikplagqea vvdlhaddsr isedeterng
      901 ddgthdkglk icrtvtqvvp aegqengqre eeeeekepea eapvppqvsv evalpppveh
      961 evkkvtlgdt ltrrsisqqk sgvsitiddp vrtaqvpspp rgkisnivhi snlvrpftlg
     1021 qlkellgrtg tlveeafwid kikshcfvty stveeavatr talhgvkwpq snpkflcady
     1081 aeqdeldyhr gllvdrpset kteeqgiprp lhppppppaq ppqhpraeqr eqeravreqw
     1141 aereremerr ertrserewd rdkvregphs rsrsrdrrrk erakskekks ekkekaqeep
     1201 pakllddlfr ktkaapciyw lpltdsqivq keaeraerak erekrrkeqe eeeqkereke
     1261 aerertrqle rekrrehsre rdrererere rdrgdrerer drerergrer drrdtkrhsr
     1321 srsrstpvrd rggrr
//
LOCUS       XP_061013778            1322 aa            linear   MAM 02-DEC-2023
DEFINITION  apoptotic chromatin condensation inducer in the nucleus isoform X2
            [Dama dama].
ACCESSION   XP_061013778
VERSION     XP_061013778.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157795.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1322
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1322
                     /product="apoptotic chromatin condensation inducer in the
                     nucleus isoform X2"
                     /calculated_mol_wt=149414
     Region          72..106
                     /region_name="SAP"
                     /note="Putative DNA-binding (bihelical) motif predicted to
                     be involved in chromosomal organisation; smart00513"
                     /db_xref="CDD:128789"
     Region          <210..442
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          <365..532
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          992..1078
                     /region_name="RRM_ACINU"
                     /note="RNA recognition motif (RRM) found in apoptotic
                     chromatin condensation inducer in the nucleus (acinus) and
                     similar proteins; cd12432"
                     /db_xref="CDD:409866"
     Region          <1187..1217
                     /region_name="RSB_motif"
                     /note="RNSP1-SAP18 binding (RSB) motif; pfam16294"
                     /db_xref="CDD:465085"
     CDS             1..1322
                     /gene="ACIN1"
                     /coded_by="XM_061157795.1:1..3969"
                     /db_xref="GeneID:133066579"
ORIGIN      
        1 myrrkhpsts ggtrgvlsgn rgvdygsgqg qlgtfegrwr klpkmpeavg tdpstsrkma
       61 eleevtldgk plqalrvtdl kaaleqrgla ksgqksalvk rlkgalmlen lqkhstphaa
      121 fqpnsqigee msqnsfikqy lekqqellrq rlereareaa eleeasaese demihpegva
      181 sllppdfqss lerpelelsr hsprksasis eekgesddek prkgerrssr vrqaraakls
      241 ecsqaaeeee dqetpsrnlr vradrnlkae eeeeeeeeee eeeeeeddde gqksrdapil
      301 kqfkeegeei prvkveevtd erpqtirsqe qeglerggrv trsqeearrs hlarhqqeke
      361 mktasppeee ereikyskvl eekskspspp rltedvakpl vvlqpeqtas eeetpppllt
      421 keasspppnt qlqseeeiep megpappvli qlsppntdae arelllsqht vqlvgslspl
      481 sgpadtkves pvekvpeesv lplvqkstpa essaqkglet esekstqplp lkieeftlak
      541 giteealeqk egrrashall pshrlkqsad ssssrsssss ssssrsrsrs pdssgsqshs
      601 pprskqrdas gahahanprd rskvgsrsts esrsrsrsrs rsassnsrks lspgvsrdss
      661 tsytetkdps sgqevaappl pqlqvlepke rtstpssvqv rrvsqpepte khvtqrlqpd
      721 rgspkkceae eaeppaatqp qtsetptshl peserihhtv eekeevtmdt senrpenevp
      781 eppmpiadqv snddrpegna edeekkessl pksfkrkisv vstkgvpagn sdteggqpsr
      841 krrwgastat tqkkpsisit teslkeavvd lhaddsrise deterngddg thdkglkicr
      901 tvtqvvpaeg qengqreeee eekepeaeap vppqvsveva lpppvehevk kvtlgdtltr
      961 rsisqqksgv sitiddpvrt aqvpspprgk isnivhisnl vrpftlgqlk ellgrtgtlv
     1021 eeafwidkik shcfvtystv eeavatrtal hgvkwpqsnp kflcadyaeq deldyhrgll
     1081 vdrpsetkte eqgiprplhp pppppaqppq hpraeqreqe ravreqwaer eremerrert
     1141 rserewdrdk vregphsrsr srdrrrkera kskekksekk ekaqeeppak llddlfrktk
     1201 aapciywlpl tdsqivqkea eraerakere krrkeqeeee qkerekeaer ertrqlerek
     1261 rrehsrerdr ererererdr gdrererdre rergrerdrr dtkrhsrsrs rstpvrdrgg
     1321 rr
//
LOCUS       XP_061013779            1295 aa            linear   MAM 02-DEC-2023
DEFINITION  apoptotic chromatin condensation inducer in the nucleus isoform X3
            [Dama dama].
ACCESSION   XP_061013779
VERSION     XP_061013779.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157796.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1295
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1295
                     /product="apoptotic chromatin condensation inducer in the
                     nucleus isoform X3"
                     /calculated_mol_wt=146220
     Region          72..106
                     /region_name="SAP"
                     /note="Putative DNA-binding (bihelical) motif predicted to
                     be involved in chromosomal organisation; smart00513"
                     /db_xref="CDD:128789"
     Region          <76..402
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          <325..492
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          965..1051
                     /region_name="RRM_ACINU"
                     /note="RNA recognition motif (RRM) found in apoptotic
                     chromatin condensation inducer in the nucleus (acinus) and
                     similar proteins; cd12432"
                     /db_xref="CDD:409866"
     Region          <1160..1190
                     /region_name="RSB_motif"
                     /note="RNSP1-SAP18 binding (RSB) motif; pfam16294"
                     /db_xref="CDD:465085"
     CDS             1..1295
                     /gene="ACIN1"
                     /coded_by="XM_061157796.1:1..3888"
                     /db_xref="GeneID:133066579"
ORIGIN      
        1 myrrkhpsts ggtrgvlsgn rgvdygsgqg qlgtfegrwr klpkmpeavg tdpstsrkma
       61 eleevtldgk plqalrvtdl kaaleqrgla ksgqksalvk rlkgalmlen lqkhstphaa
      121 fqpnsqigee msqnsfikqy lekqqellrq rlereareaa elegksasis eekgesddek
      181 prkgerrssr vrqaraakls ecsqaaeeee dqetpsrnlr vradrnlkae eeeeeeeeee
      241 eeeeeeddde gqksrdapil kqfkeegeei prvkveevtd erpqtirsqe qeglerggrv
      301 trsqeearrs hlarhqqeke mktasppeee ereikyskvl eekskspspp rltedvakpl
      361 vvlqpeqtas eeetpppllt keasspppnt qlqseeeiep megpappvli qlsppntdae
      421 arelllsqht vqlvgslspl sgpadtkves pvekvpeesv lplvqkstpa essaqkglet
      481 esekstqplp lkieeftlak giteealeqk egrrashall pshrlkqsad ssssrsssss
      541 ssssrsrsrs pdssgsqshs pprskqrdas gahahanprd rskvgsrsts esrsrsrsrs
      601 rsassnsrks lspgvsrdss tsytetkdps sgqevaappl pqlqvlepke rtstpssvqv
      661 rrvsqpepte khvtqrlqpd rgspkkceae eaeppaatqp qtsetptshl peserihhtv
      721 eekeevtmdt senrpenevp eppmpiadqv snddrpegna edeekkessl pksfkrkisv
      781 vsatkgvpag nsdteggqps rkrrwgasta ttqkkpsisi tteslkslip dikplagqea
      841 vvdlhaddsr isedeterng ddgthdkglk icrtvtqvvp aegqengqre eeeeekepea
      901 eapvppqvsv evalpppveh evkkvtlgdt ltrrsisqqk sgvsitiddp vrtaqvpspp
      961 rgkisnivhi snlvrpftlg qlkellgrtg tlveeafwid kikshcfvty stveeavatr
     1021 talhgvkwpq snpkflcady aeqdeldyhr gllvdrpset kteeqgiprp lhppppppaq
     1081 ppqhpraeqr eqeravreqw aereremerr ertrserewd rdkvregphs rsrsrdrrrk
     1141 erakskekks ekkekaqeep pakllddlfr ktkaapciyw lpltdsqivq keaeraerak
     1201 erekrrkeqe eeeqkereke aerertrqle rekrrehsre rdrererere rdrgdrerer
     1261 drerergrer drrdtkrhsr srsrstpvrd rggrr
//
LOCUS       XP_061013780            1205 aa            linear   MAM 02-DEC-2023
DEFINITION  apoptotic chromatin condensation inducer in the nucleus isoform X4
            [Dama dama].
ACCESSION   XP_061013780
VERSION     XP_061013780.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157797.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1205
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1205
                     /product="apoptotic chromatin condensation inducer in the
                     nucleus isoform X4"
                     /calculated_mol_wt=136564
     Region          14..48
                     /region_name="SAP"
                     /note="Putative DNA-binding (bihelical) motif predicted to
                     be involved in chromosomal organisation; smart00513"
                     /db_xref="CDD:128789"
     Region          <152..384
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          <325..474
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          875..961
                     /region_name="RRM_ACINU"
                     /note="RNA recognition motif (RRM) found in apoptotic
                     chromatin condensation inducer in the nucleus (acinus) and
                     similar proteins; cd12432"
                     /db_xref="CDD:409866"
     Region          <1070..1100
                     /region_name="RSB_motif"
                     /note="RNSP1-SAP18 binding (RSB) motif; pfam16294"
                     /db_xref="CDD:465085"
     CDS             1..1205
                     /gene="ACIN1"
                     /coded_by="XM_061157797.1:20..3637"
                     /db_xref="GeneID:133066579"
ORIGIN      
        1 maeleevtld gkplqalrvt dlkaaleqrg laksgqksal vkrlkgalml enlqkhstph
       61 aafqpnsqig eemsqnsfik qylekqqell rqrlereare aaeleeasae sedemihpeg
      121 vasllppdfq sslerpelel srhsprksas iseekgesdd ekprkgerrs srvrqaraak
      181 lsecsqaaee eedqetpsrn lrvradrnlk aeeeeeeeee eeeeeeeedd degqksrdap
      241 ilkqfkeege eiprvkveev tderpqtirs qeqeglergg rvtrsqeear rshlarhqqe
      301 kemktasppe eeereikysk vleeksksps pprltedvak plvvlqpeqt aseeetpppl
      361 ltkeassppp ntqlqseeei epmegpappv liqlsppntd aearelllsq htvqlvgsls
      421 plsgpadtkv espvekvpee svlplvqkst paessaqkgl etesekstqp lplkieeftl
      481 akgiteeale qkegrrasha llpshrlkqs adssssrsss ssssssrsrs rspdssgsqs
      541 hspprskqrd asgahahanp rdrskvgsrs tsesrsrsrs rsrsassnsr kgspkkceae
      601 eaeppaatqp qtsetptshl peserihhtv eekeevtmdt senrpenevp eppmpiadqv
      661 snddrpegna edeekkessl pksfkrkisv vsatkgvpag nsdteggqps rkrrwgasta
      721 ttqkkpsisi tteslkslip dikplagqea vvdlhaddsr isedeterng ddgthdkglk
      781 icrtvtqvvp aegqengqre eeeeekepea eapvppqvsv evalpppveh evkkvtlgdt
      841 ltrrsisqqk sgvsitiddp vrtaqvpspp rgkisnivhi snlvrpftlg qlkellgrtg
      901 tlveeafwid kikshcfvty stveeavatr talhgvkwpq snpkflcady aeqdeldyhr
      961 gllvdrpset kteeqgiprp lhppppppaq ppqhpraeqr eqeravreqw aereremerr
     1021 ertrserewd rdkvregphs rsrsrdrrrk erakskekks ekkekaqeep pakllddlfr
     1081 ktkaapciyw lpltdsqivq keaeraerak erekrrkeqe eeeqkereke aerertrqle
     1141 rekrrehsre rdrererere rdrgdrerer drerergrer drrdtkrhsr srsrstpvrd
     1201 rggrr
//
LOCUS       XP_061013781             615 aa            linear   MAM 02-DEC-2023
DEFINITION  apoptotic chromatin condensation inducer in the nucleus isoform X5
            [Dama dama].
ACCESSION   XP_061013781
VERSION     XP_061013781.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157798.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..615
                     /product="apoptotic chromatin condensation inducer in the
                     nucleus isoform X5"
                     /calculated_mol_wt=70928
     Region          285..371
                     /region_name="RRM_ACINU"
                     /note="RNA recognition motif (RRM) found in apoptotic
                     chromatin condensation inducer in the nucleus (acinus) and
                     similar proteins; cd12432"
                     /db_xref="CDD:409866"
     Region          <480..510
                     /region_name="RSB_motif"
                     /note="RNSP1-SAP18 binding (RSB) motif; pfam16294"
                     /db_xref="CDD:465085"
     CDS             1..615
                     /gene="ACIN1"
                     /coded_by="XM_061157798.1:40..1887"
                     /db_xref="GeneID:133066579"
ORIGIN      
        1 mspadrhrsa stiepattss lallllllqr dqssrirglp eekeevtmdt senrpenevp
       61 eppmpiadqv snddrpegna edeekkessl pksfkrkisv vsatkgvpag nsdteggqps
      121 rkrrwgasta ttqkkpsisi tteslkslip dikplagqea vvdlhaddsr isedeterng
      181 ddgthdkglk icrtvtqvvp aegqengqre eeeeekepea eapvppqvsv evalpppveh
      241 evkkvtlgdt ltrrsisqqk sgvsitiddp vrtaqvpspp rgkisnivhi snlvrpftlg
      301 qlkellgrtg tlveeafwid kikshcfvty stveeavatr talhgvkwpq snpkflcady
      361 aeqdeldyhr gllvdrpset kteeqgiprp lhppppppaq ppqhpraeqr eqeravreqw
      421 aereremerr ertrserewd rdkvregphs rsrsrdrrrk erakskekks ekkekaqeep
      481 pakllddlfr ktkaapciyw lpltdsqivq keaeraerak erekrrkeqe eeeqkereke
      541 aerertrqle rekrrehsre rdrererere rdrgdrerer drerergrer drrdtkrhsr
      601 srsrstpvrd rggrr
//
LOCUS       XP_061013782             142 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C14orf119 homolog [Dama dama].
ACCESSION   XP_061013782
VERSION     XP_061013782.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157799.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..142
                     /product="uncharacterized protein C14orf119 homolog"
                     /calculated_mol_wt=15966
     Region          38..135
                     /region_name="DUF4508"
                     /note="Domain of unknown function (DUF4508); pfam14969"
                     /db_xref="CDD:464413"
     CDS             1..142
                     /gene="C12H14orf119"
                     /coded_by="XM_061157799.1:503..931"
                     /db_xref="GeneID:133066581"
ORIGIN      
        1 mplessstsm plsfpsplpp vpdnisnssp ppmsyitsqe mkcilhwfas wsgpqrerfl
       61 rdlvakavpg klqpllesle qlsvsganrp pcifecqlrl wdqwfrgwae qernefvrql
      121 evsepdfvak fyqavaatag ke
//
LOCUS       XP_061013783             540 aa            linear   MAM 02-DEC-2023
DEFINITION  homeobox and leucine zipper protein Homez isoform X1 [Dama dama].
ACCESSION   XP_061013783
VERSION     XP_061013783.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157800.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..540
                     /product="homeobox and leucine zipper protein Homez
                     isoform X1"
                     /calculated_mol_wt=60197
     Region          65..114
                     /region_name="homeodomain"
                     /note="Homeodomain; DNA binding domains involved in the
                     transcriptional regulation of key eukaryotic developmental
                     processes; may bind to DNA as monomers or as homo- and/or
                     heterodimers, in a sequence-specific manner; cd00086"
                     /db_xref="CDD:238039"
     Region          297..441
                     /region_name="COG5576"
                     /note="Homeodomain-containing transcription factor
                     [Transcription]"
                     /db_xref="CDD:227863"
     Region          351..408
                     /region_name="homeodomain"
                     /note="Homeodomain; DNA binding domains involved in the
                     transcriptional regulation of key eukaryotic developmental
                     processes; may bind to DNA as monomers or as homo- and/or
                     heterodimers, in a sequence-specific manner; cd00086"
                     /db_xref="CDD:238039"
     Site            order(351..354,356,373,379,392,394..395,398..399,401..403,
                     405..406)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     Site            order(352,355,395,398..399,402)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     Region          454..501
                     /region_name="Homez"
                     /note="Homeodomain leucine-zipper encoding, Homez;
                     pfam11569"
                     /db_xref="CDD:463297"
     CDS             1..540
                     /gene="HOMEZ"
                     /coded_by="XM_061157800.1:163..1785"
                     /db_xref="GeneID:133066582"
ORIGIN      
        1 mvrgwepppg ldcaiseghk sestmppnke asslnscpag liclppisee lqlvwtqaaq
       61 tseldsnehl lqtfsyfpyp sladiallcl ryglqmekvk twfmaqrlrc giswsseeie
      121 etrarvvyhr dqlhfkslls fthhagrppe evppspvppp eqvglgivpl tlseptqmkg
      181 lkvepeepls hqkakeplmv pgsgafphqs qfwqdhqcsg lskeqagrgp dqshslgtas
      241 wnhstavqqp hardkpppis llassckkes asnvtppsst sssscqglan gapasskplq
      301 plgcasqpls pheqalppql epawpqglrh nsasgrvgpa eylspdmqrq rktkrktkeq
      361 lailksfflq cqwarredyh kleqitglpr peiiqwfgdt ryalkhgqlk wfrdnavpga
      421 psfqdpavpt ppstrslnew aetpplpnpp pppdirpler ywathqqlre sdipqlsqas
      481 rlstqqvldw fdsrlpepae vvvcldeeee eeeeelpedd edeeeeeedd dddddviiqd
//
LOCUS       XP_061013784             516 aa            linear   MAM 02-DEC-2023
DEFINITION  homeobox and leucine zipper protein Homez isoform X2 [Dama dama].
ACCESSION   XP_061013784
VERSION     XP_061013784.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157801.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..516
                     /product="homeobox and leucine zipper protein Homez
                     isoform X2"
                     /calculated_mol_wt=57632
     Region          41..90
                     /region_name="homeodomain"
                     /note="Homeodomain; DNA binding domains involved in the
                     transcriptional regulation of key eukaryotic developmental
                     processes; may bind to DNA as monomers or as homo- and/or
                     heterodimers, in a sequence-specific manner; cd00086"
                     /db_xref="CDD:238039"
     Region          273..417
                     /region_name="COG5576"
                     /note="Homeodomain-containing transcription factor
                     [Transcription]"
                     /db_xref="CDD:227863"
     Region          327..384
                     /region_name="homeodomain"
                     /note="Homeodomain; DNA binding domains involved in the
                     transcriptional regulation of key eukaryotic developmental
                     processes; may bind to DNA as monomers or as homo- and/or
                     heterodimers, in a sequence-specific manner; cd00086"
                     /db_xref="CDD:238039"
     Site            order(327..330,332,349,355,368,370..371,374..375,377..379,
                     381..382)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     Site            order(328,331,371,374..375,378)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     Region          430..477
                     /region_name="Homez"
                     /note="Homeodomain leucine-zipper encoding, Homez;
                     pfam11569"
                     /db_xref="CDD:463297"
     CDS             1..516
                     /gene="HOMEZ"
                     /coded_by="XM_061157801.1:548..2098"
                     /db_xref="GeneID:133066582"
ORIGIN      
        1 mppnkeassl nscpaglicl ppiseelqlv wtqaaqtsel dsnehllqtf syfpypslad
       61 iallclrygl qmekvktwfm aqrlrcgisw sseeieetra rvvyhrdqlh fksllsfthh
      121 agrppeevpp spvpppeqvg lgivpltlse ptqmkglkve peeplshqka keplmvpgsg
      181 afphqsqfwq dhqcsglske qagrgpdqsh slgtaswnhs tavqqphard kpppisllas
      241 sckkesasnv tppsstssss cqglangapa sskplqplgc asqplspheq alppqlepaw
      301 pqglrhnsas grvgpaeyls pdmqrqrktk rktkeqlail ksfflqcqwa rredyhkleq
      361 itglprpeii qwfgdtryal khgqlkwfrd navpgapsfq dpavptppst rslnewaetp
      421 plpnpppppd irplerywat hqqlresdip qlsqasrlst qqvldwfdsr lpepaevvvc
      481 ldeeeeeeee elpeddedee eeeedddddd dviiqd
//
LOCUS       XP_061013785             527 aa            linear   MAM 02-DEC-2023
DEFINITION  large neutral amino acids transporter small subunit 2 isoform X1
            [Dama dama].
ACCESSION   XP_061013785
VERSION     XP_061013785.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157802.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..527
                     /product="large neutral amino acids transporter small
                     subunit 2 isoform X1"
                     /calculated_mol_wt=57523
     Region          1..493
                     /region_name="2A0308"
                     /note="L-type amino acid transporter; TIGR00911"
                     /db_xref="CDD:273332"
     CDS             1..527
                     /gene="SLC7A8"
                     /coded_by="XM_061157802.1:346..1929"
                     /db_xref="GeneID:133066583"
ORIGIN      
        1 mekgarhrnn teknhpggss sqeadsgggg valkkeiglv sacgiivgni igsgifvspk
       61 gvlenagsvg valiiwivtg litavgalcy aelgvtipks ggdysyvkdi fgglagflrl
      121 wiavlviypt nqavialtfs nyvlqplfpt cfppesglrl laalcllllt wvncfsvrwa
      181 trvqdiftag kllalaliii mgivqickgq yfwlepknaf dnfqepdigl ialaflqgsf
      241 ayggwnflny vteelvdpyk nlpraifisi plvtfvyvfa nvayvtamsp qellasnava
      301 vtfgekllgv mawimpisva lstfggvngs lftssrlffa gareghlpsv lamihvkrct
      361 pipallftci stllmlvtsd iytlinyvgf inylfygvtv agqivlrwkk pdinrpikvn
      421 llfpiiyllf wafllvfslw sepvvcgigl aimltgvpvy flgvswqhkp rcfnkfiell
      481 tlvsqkmcvv vypkgdkdpk meersqdmeq qqpicqppas kdkdaep
//
LOCUS       XP_061013786             527 aa            linear   MAM 02-DEC-2023
DEFINITION  large neutral amino acids transporter small subunit 2 isoform X1
            [Dama dama].
ACCESSION   XP_061013786
VERSION     XP_061013786.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157803.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..527
                     /product="large neutral amino acids transporter small
                     subunit 2 isoform X1"
                     /calculated_mol_wt=57523
     Region          1..493
                     /region_name="2A0308"
                     /note="L-type amino acid transporter; TIGR00911"
                     /db_xref="CDD:273332"
     CDS             1..527
                     /gene="SLC7A8"
                     /coded_by="XM_061157803.1:173..1756"
                     /db_xref="GeneID:133066583"
ORIGIN      
        1 mekgarhrnn teknhpggss sqeadsgggg valkkeiglv sacgiivgni igsgifvspk
       61 gvlenagsvg valiiwivtg litavgalcy aelgvtipks ggdysyvkdi fgglagflrl
      121 wiavlviypt nqavialtfs nyvlqplfpt cfppesglrl laalcllllt wvncfsvrwa
      181 trvqdiftag kllalaliii mgivqickgq yfwlepknaf dnfqepdigl ialaflqgsf
      241 ayggwnflny vteelvdpyk nlpraifisi plvtfvyvfa nvayvtamsp qellasnava
      301 vtfgekllgv mawimpisva lstfggvngs lftssrlffa gareghlpsv lamihvkrct
      361 pipallftci stllmlvtsd iytlinyvgf inylfygvtv agqivlrwkk pdinrpikvn
      421 llfpiiyllf wafllvfslw sepvvcgigl aimltgvpvy flgvswqhkp rcfnkfiell
      481 tlvsqkmcvv vypkgdkdpk meersqdmeq qqpicqppas kdkdaep
//
LOCUS       XP_061013787             527 aa            linear   MAM 02-DEC-2023
DEFINITION  large neutral amino acids transporter small subunit 2 isoform X1
            [Dama dama].
ACCESSION   XP_061013787
VERSION     XP_061013787.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157804.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..527
                     /product="large neutral amino acids transporter small
                     subunit 2 isoform X1"
                     /calculated_mol_wt=57523
     Region          1..493
                     /region_name="2A0308"
                     /note="L-type amino acid transporter; TIGR00911"
                     /db_xref="CDD:273332"
     CDS             1..527
                     /gene="SLC7A8"
                     /coded_by="XM_061157804.1:181..1764"
                     /db_xref="GeneID:133066583"
ORIGIN      
        1 mekgarhrnn teknhpggss sqeadsgggg valkkeiglv sacgiivgni igsgifvspk
       61 gvlenagsvg valiiwivtg litavgalcy aelgvtipks ggdysyvkdi fgglagflrl
      121 wiavlviypt nqavialtfs nyvlqplfpt cfppesglrl laalcllllt wvncfsvrwa
      181 trvqdiftag kllalaliii mgivqickgq yfwlepknaf dnfqepdigl ialaflqgsf
      241 ayggwnflny vteelvdpyk nlpraifisi plvtfvyvfa nvayvtamsp qellasnava
      301 vtfgekllgv mawimpisva lstfggvngs lftssrlffa gareghlpsv lamihvkrct
      361 pipallftci stllmlvtsd iytlinyvgf inylfygvtv agqivlrwkk pdinrpikvn
      421 llfpiiyllf wafllvfslw sepvvcgigl aimltgvpvy flgvswqhkp rcfnkfiell
      481 tlvsqkmcvv vypkgdkdpk meersqdmeq qqpicqppas kdkdaep
//
LOCUS       XP_061013788             306 aa            linear   MAM 02-DEC-2023
DEFINITION  large neutral amino acids transporter small subunit 2 isoform X2
            [Dama dama].
ACCESSION   XP_061013788
VERSION     XP_061013788.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157805.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..306
                     /product="large neutral amino acids transporter small
                     subunit 2 isoform X2"
                     /calculated_mol_wt=33863
     Region          <39..272
                     /region_name="2A0308"
                     /note="L-type amino acid transporter; TIGR00911"
                     /db_xref="CDD:273332"
     CDS             1..306
                     /gene="SLC7A8"
                     /coded_by="XM_061157805.1:1..921"
                     /db_xref="GeneID:133066583"
ORIGIN      
        1 mgqllqcavg hpgsrhlhsw eapgpgpdhh hgdctdlqrn lpraifisip lvtfvyvfan
       61 vayvtamspq ellasnavav tfgekllgvm awimpisval stfggvngsl ftssrlffag
      121 areghlpsvl amihvkrctp ipallftcis tllmlvtsdi ytlinyvgfi nylfygvtva
      181 gqivlrwkkp dinrpikvnl lfpiiyllfw afllvfslws epvvcgigla imltgvpvyf
      241 lgvswqhkpr cfnkfiellt lvsqkmcvvv ypkgdkdpkm eersqdmeqq qpicqppask
      301 dkdaep
//
LOCUS       XP_061013789             295 aa            linear   MAM 02-DEC-2023
DEFINITION  RING finger protein 212B [Dama dama].
ACCESSION   XP_061013789
VERSION     XP_061013789.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157806.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..295
                     /product="RING finger protein 212B"
                     /calculated_mol_wt=32918
     Region          4..40
                     /region_name="RING-HC_RNF212B"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 212B (RNF212B) and similar proteins; cd16747"
                     /db_xref="CDD:438405"
     CDS             1..295
                     /gene="RNF212B"
                     /coded_by="XM_061157806.1:1693..2580"
                     /db_xref="GeneID:133066584"
ORIGIN      
        1 mdwfhcnrcf rkdgahffvt ncghifckkc vilekcavcg tackylalsd nlkpqekmyf
       61 knpvetalqy fshisqvwsf qkkqtdllia fykhrvtkle aamqesqetl tnqdkelsvl
      121 rkengelkkf laivkespsw yqgsrlntpr pvgitspsqs vtprpisqhs sqvvsrsssv
      181 estpyrmagf snlgqgargl qgrstprdsf tetpspasth slsyrassvs sgqgvfsfrp
      241 slnggdsght rvftpnnsgq rqnrttpesl pgfqlpllqr qmglargrea wntpr
//
LOCUS       XP_061013790             306 aa            linear   MAM 02-DEC-2023
DEFINITION  polyadenylate-binding protein 2 [Dama dama].
ACCESSION   XP_061013790
VERSION     XP_061013790.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157807.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..306
                     /product="polyadenylate-binding protein 2"
                     /calculated_mol_wt=32645
     Region          173..248
                     /region_name="RRM_II_PABPN1"
                     /note="RNA recognition motif in type II
                     polyadenylate-binding protein 2 (PABP-2) and similar
                     proteins; cd12550"
                     /db_xref="CDD:409966"
     CDS             1..306
                     /gene="PABPN1"
                     /coded_by="XM_061157807.1:16..936"
                     /db_xref="GeneID:133066586"
ORIGIN      
        1 maaaaaaaaa agaaggrgsg pgrrrhlvpg aggeagegap ggagdygngl eseelepeel
       61 llepepepep eeepprprap pgapgpgpgs gapgnqeeee epglvegdpg dgaiedpele
      121 aikarvreme eeaeklkelq nevekqmnms pppgnagpvi msieekmead arsiyvgnvd
      181 ygataeelea hfhgcgsvnr vtilcdkfsg hpkgfayief sdkesvrtsl aldeslfrgr
      241 qikvipkrtn rpgisttdrg fpraryrart tnynssrsrf ysgfnsrprg rvyrgrarat
      301 swyspy
//
LOCUS       XP_061013791             279 aa            linear   MAM 02-DEC-2023
DEFINITION  protein phosphatase 1 regulatory subunit 3E [Dama dama].
ACCESSION   XP_061013791
VERSION     XP_061013791.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157808.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..279
                     /product="protein phosphatase 1 regulatory subunit 3E"
                     /calculated_mol_wt=30726
     Region          <82..110
                     /region_name="PBD_PPP1R3"
                     /note="PP1C binding domain found in protein phosphatase 1
                     regulatory subunit 3 (PPP1R3) family; cl41685"
                     /db_xref="CDD:455118"
     Site            order(86..92,94,96,98..104)
                     /site_type="other"
                     /note="PP1C binding site [polypeptide binding]"
                     /db_xref="CDD:439277"
     Region          156..258
                     /region_name="CBM_21"
                     /note="Carbohydrate/starch-binding module (family 21);
                     pfam03370"
                     /db_xref="CDD:427265"
     CDS             1..279
                     /gene="PPP1R3E"
                     /coded_by="XM_061157808.1:1032..1871"
                     /db_xref="GeneID:133066587"
ORIGIN      
        1 msrerhprtd iprnlsfias lterayylsq rpsleeepee epgeggtrlg arsrapgpsr
       61 grrarsapag gsgiralrnh spdtrkrvrf adalglelaa vrrfrpgelp rvprhvqvql
      121 qrdalrhfap cqprarglqe araalepase pgfaarlqaq riclerveas plgvagsarv
      181 ldlayekrvs vrwsadgwrs qreapaayag pappppradr fsfrlpappi ggallfalry
      241 rvtgrefwdn nggrdyalrg pehpgsggnp epqgwihfi
//
LOCUS       XP_061013792             193 aa            linear   MAM 02-DEC-2023
DEFINITION  bcl-2-like protein 2 [Dama dama].
ACCESSION   XP_061013792
VERSION     XP_061013792.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157809.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..193
                     /product="bcl-2-like protein 2"
                     /calculated_mol_wt=20643
     Site            9..21
                     /site_type="active"
                     /note="BH4 [active]"
                     /db_xref="CDD:132900"
     Region          11..193
                     /region_name="bcl-2"
                     /note="apoptosis regulator; TIGR00865"
                     /db_xref="CDD:273308"
     Site            46..54
                     /site_type="active"
                     /note="BH3 [active]"
                     /db_xref="CDD:132900"
     Site            order(49..50,52..53,57,60..61,77..78,81..82,85..86,92,
                     94..95,97..98,102,106)
                     /site_type="active"
                     /note="BH3-homology region binding site [active]"
                     /db_xref="CDD:132900"
     Site            order(85..87,91..103)
                     /site_type="active"
                     /note="BH1 [active]"
                     /db_xref="CDD:132900"
     Site            136..147
                     /site_type="active"
                     /note="BH2 [active]"
                     /db_xref="CDD:132900"
     CDS             1..193
                     /gene="BCL2L2"
                     /coded_by="XM_061157809.1:198..779"
                     /db_xref="GeneID:133066588"
ORIGIN      
        1 matpasapdt ralvadfvgy klrqkgyvcg agpgegpaad plhqamraag defetrfrrt
       61 fsdlaaqlhv tpgsaqqrft qvsdelfqgg pnwgrlvaff vfgaalcaes vnkemeplvg
      121 qvqewmvayl etrladwihs sggwaeftal ygdgaleear rlregnwasv rtvltgaval
      181 galvtvgaff ask
//
LOCUS       XP_061013793             193 aa            linear   MAM 02-DEC-2023
DEFINITION  bcl-2-like protein 2 [Dama dama].
ACCESSION   XP_061013793
VERSION     XP_061013793.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157810.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..193
                     /product="bcl-2-like protein 2"
                     /calculated_mol_wt=20643
     Site            9..21
                     /site_type="active"
                     /note="BH4 [active]"
                     /db_xref="CDD:132900"
     Region          11..193
                     /region_name="bcl-2"
                     /note="apoptosis regulator; TIGR00865"
                     /db_xref="CDD:273308"
     Site            46..54
                     /site_type="active"
                     /note="BH3 [active]"
                     /db_xref="CDD:132900"
     Site            order(49..50,52..53,57,60..61,77..78,81..82,85..86,92,
                     94..95,97..98,102,106)
                     /site_type="active"
                     /note="BH3-homology region binding site [active]"
                     /db_xref="CDD:132900"
     Site            order(85..87,91..103)
                     /site_type="active"
                     /note="BH1 [active]"
                     /db_xref="CDD:132900"
     Site            136..147
                     /site_type="active"
                     /note="BH2 [active]"
                     /db_xref="CDD:132900"
     CDS             1..193
                     /gene="BCL2L2"
                     /coded_by="XM_061157810.1:238..819"
                     /db_xref="GeneID:133066588"
ORIGIN      
        1 matpasapdt ralvadfvgy klrqkgyvcg agpgegpaad plhqamraag defetrfrrt
       61 fsdlaaqlhv tpgsaqqrft qvsdelfqgg pnwgrlvaff vfgaalcaes vnkemeplvg
      121 qvqewmvayl etrladwihs sggwaeftal ygdgaleear rlregnwasv rtvltgaval
      181 galvtvgaff ask
//
LOCUS       XP_061013795             193 aa            linear   MAM 02-DEC-2023
DEFINITION  bcl-2-like protein 2 [Dama dama].
ACCESSION   XP_061013795
VERSION     XP_061013795.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157812.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..193
                     /product="bcl-2-like protein 2"
                     /calculated_mol_wt=20643
     Site            9..21
                     /site_type="active"
                     /note="BH4 [active]"
                     /db_xref="CDD:132900"
     Region          11..193
                     /region_name="bcl-2"
                     /note="apoptosis regulator; TIGR00865"
                     /db_xref="CDD:273308"
     Site            46..54
                     /site_type="active"
                     /note="BH3 [active]"
                     /db_xref="CDD:132900"
     Site            order(49..50,52..53,57,60..61,77..78,81..82,85..86,92,
                     94..95,97..98,102,106)
                     /site_type="active"
                     /note="BH3-homology region binding site [active]"
                     /db_xref="CDD:132900"
     Site            order(85..87,91..103)
                     /site_type="active"
                     /note="BH1 [active]"
                     /db_xref="CDD:132900"
     Site            136..147
                     /site_type="active"
                     /note="BH2 [active]"
                     /db_xref="CDD:132900"
     CDS             1..193
                     /gene="BCL2L2"
                     /coded_by="XM_061157812.1:150..731"
                     /db_xref="GeneID:133066588"
ORIGIN      
        1 matpasapdt ralvadfvgy klrqkgyvcg agpgegpaad plhqamraag defetrfrrt
       61 fsdlaaqlhv tpgsaqqrft qvsdelfqgg pnwgrlvaff vfgaalcaes vnkemeplvg
      121 qvqewmvayl etrladwihs sggwaeftal ygdgaleear rlregnwasv rtvltgaval
      181 galvtvgaff ask
//
LOCUS       XP_061013796             567 aa            linear   MAM 02-DEC-2023
DEFINITION  solute carrier family 22 member 17 isoform X1 [Dama dama].
ACCESSION   XP_061013796
VERSION     XP_061013796.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157813.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..567
                     /product="solute carrier family 22 member 17 isoform X1"
                     /calculated_mol_wt=60041
     Region          110..523
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(130..131,134..135,138,162,212..213,215..217,220,236,
                     239..240,243,362,365..366,369..371,374,395,399,451..452,
                     456,460,476,479..480,483..484,487)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:341003"
     CDS             1..567
                     /gene="SLC22A17"
                     /coded_by="XM_061157813.1:382..2085"
                     /db_xref="GeneID:133066589"
ORIGIN      
        1 mgsslslavp pgplsfeall aqvgalgggq qlqlglcclp vlfvalglas dpiftlappl
       61 hchygafppn asgweqppna sgvsvasaal aasaasrlat sadpscsgfa ppdfnhclkd
      121 wdynglpvlt tnaigqwdlv cdlgwqvile qilfilgfas gylflgypad rfgrrgivll
      181 tlglvgpcgv ggaaagsstg vmalrfllgf llagvdlgvy lmrlelcdpt qrlrvalage
      241 lvgvgghflf lglalvskdw rflqrmitap cilflfygwp glflesarwl ivkrqieeaq
      301 svlrilaern rphgqmlgee aqealqdlen tcpvpatssf sfasllnyrn iwknllilgf
      361 tnfiahairh cyqpvggggs psdfylcsll asgtaalacv flgvtvdrfg rrgilllsmt
      421 ltgiaslall glwdylneaa ittfsvlglf ssqaagilst llaaeiiptt vrgrglglim
      481 algalgglsg paqrlhmghg aflqhvvlaa callcilsim llpetkrkll pevlrdgelc
      541 rrpsllrqpp pnrcdhvpll atpnpal
//
LOCUS       XP_061013797             459 aa            linear   MAM 02-DEC-2023
DEFINITION  solute carrier family 22 member 17 isoform X2 [Dama dama].
ACCESSION   XP_061013797
VERSION     XP_061013797.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157814.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..459
                     /product="solute carrier family 22 member 17 isoform X2"
                     /calculated_mol_wt=48455
     Region          110..415
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(130..131,134..135,138,162,212..213,215..217,220,236,
                     239..240,243,285..286,291,343..344,348,352,368,371..372,
                     375..376,379)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:341003"
     CDS             1..459
                     /gene="SLC22A17"
                     /coded_by="XM_061157814.1:97..1476"
                     /db_xref="GeneID:133066589"
ORIGIN      
        1 mgsslslavp pgplsfeall aqvgalgggq qlqlglcclp vlfvalglas dpiftlappl
       61 hchygafppn asgweqppna sgvsvasaal aasaasrlat sadpscsgfa ppdfnhclkd
      121 wdynglpvlt tnaigqwdlv cdlgwqvile qilfilgfas gylflgypad rfgrrgivll
      181 tlglvgpcgv ggaaagsstg vmalrfllgf llagvdlgvy lmrlelcdpt qrlrvalage
      241 lvgvgghflf lglalvskdw rflqrmitap cilflfygwp glflesarwl ivkrqieeaq
      301 svlrilaern rphgqmlgee aqealqdlne aaittfsvlg lfssqaagil stllaaeiip
      361 ttvrgrglgl imalgalggl sgpaqrlhmg hgaflqhvvl aacallcils imllpetkrk
      421 llpevlrdge lcrrpsllrq pppnrcdhvp llatpnpal
//
LOCUS       XP_061013798             561 aa            linear   MAM 02-DEC-2023
DEFINITION  embryonal Fyn-associated substrate [Dama dama].
ACCESSION   XP_061013798
VERSION     XP_061013798.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157815.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..561
                     /product="embryonal Fyn-associated substrate"
                     /calculated_mol_wt=58120
     Region          8..70
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
     Site            order(14,16,19,23,45..46,59,61..62)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212936"
     Region          <69..>278
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          371..556
                     /region_name="CAS_C"
                     /note="Crk-Associated Substrate C-terminal domain;
                     pfam12026"
                     /db_xref="CDD:463437"
     CDS             1..561
                     /gene="EFS"
                     /coded_by="XM_061157815.1:370..2055"
                     /db_xref="GeneID:133066590"
ORIGIN      
        1 maiatsaqla ralydntaes pqelsfrrgd vlrvlqgega ggldgwclcs lhgqqgivpa
       61 nrvkllpagp apkpglsqvp ptqpgsphpa pehgsedqel yvvppparpc ptsrppagpc
      121 ppspdpiykv prgggtqlaa pgaalevydv pptalrvpsn gpydspasfa rplaqvapqs
      181 lgedeapydv plapkspsdl epdleweggr epgpplyaap snlkrasall nlyeapeell
      241 adgegggade giydvpllgp etppspeplg asassdpdtl alllarsppp phrprlpsae
      301 slsrrplpal pvpeapspsp apspapgrkg siqdrplppp pprlpgyggp kvegdpegre
      361 veddpagyhn eyegipvaee ydyvhlkgmd kaqearppdk aspgdpeqle rgppeqqeal
      421 spgeplvlpt gdlqllhfya gqcqghystl qaavaalmss tqanqpprlf vphgkrvlva
      481 ahrlvfvgdt lgrlaasapl raqvgaagta lgqalratvl aikgaalgyp sspaaqemaq
      541 cvadlagral qfttllasla p
//
LOCUS       XP_061013799             315 aa            linear   MAM 02-DEC-2023
DEFINITION  neuroguidin [Dama dama].
ACCESSION   XP_061013799
VERSION     XP_061013799.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157816.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..315
                     /product="neuroguidin"
                     /calculated_mol_wt=35596
     Region          18..98
                     /region_name="Sas10_Utp3"
                     /note="Sas10/Utp3/C1D family; pfam04000"
                     /db_xref="CDD:461123"
     CDS             1..315
                     /gene="NGDN"
                     /coded_by="XM_061157816.1:78..1025"
                     /db_xref="GeneID:133066591"
ORIGIN      
        1 maapevlesd lpnavallkn lqeqvmavta qvqtltkkvq akayptekgl sllevkdqll
       61 lmylmdlshl ilekasggsl qghpavlrlv eirtvleklr pldqklkyqi dklvktavtg
      121 slsendplrf kphpsnmmsk lssedeeede teegqsgasg kksgkgtakk yvpprlvpvh
      181 ydeteaerek kclerakrra lsssvirelk eqysdapeei rdarhphvtr qsqedqhrin
      241 yeesmmvrls vskrekgrrk ranvmssqlh slthfgdisa ltggtphlde dqnptkkrkk
      301 ipkkgrkkkg frrrr
//
LOCUS       XP_061013800            2570 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger homeobox protein 2 [Dama dama].
ACCESSION   XP_061013800
VERSION     XP_061013800.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157817.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2570
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2570
                     /product="zinc finger homeobox protein 2"
                     /calculated_mol_wt=271953
     Region          <17..419
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          456..476
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          509..533
                     /region_name="zf-H2C2_5"
                     /note="C2H2-type zinc-finger domain; pfam13909"
                     /db_xref="CDD:404746"
     Region          511..528
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1196..1218
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1196,1199,1212,1218)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          1252..1270
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1597..1654
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          1859..1915
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          2067..2123
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          2453..2496
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Site            order(2460..2462,2464..2465,2469,2495,2502,2505..2509,
                     2511..2512)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275371"
     Region          2497..2519
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     CDS             1..2570
                     /gene="ZFHX2"
                     /coded_by="XM_061157817.1:666..8378"
                     /db_xref="GeneID:133066592"
ORIGIN      
        1 matlnlssvt gtipspghda pslppdtssp stpsdpvtkd apdapstses mrsseaggqp
       61 lesgcglvpp keigepqeep gcgsfppkdl gveeyeelee eegglppvdl sdhlffatgg
      121 eaclvaklfp pgdselplpk gfprgeagvq eesslpllah pppvhltalh vqhgfdpiqg
      181 fsssdqilsh dtsapspatc egrdgafwsy qlapnppgdp kdgptgsggg dpralfwfcl
      241 lcrlgfsrpq afvghtrshg vkltaaqhqg llgnpavlqe gdeacmalls flepkpparp
      301 lerpldnsst mnteanaaqi edgppaaeaq apvppmeevm alsppspqtt patwdpsptq
      361 akesptsagg agpdwfpegh eedgglcppl nqssptskeg gtlpalggsp edpgdpaqpy
      421 rladdyslap aafqglslss hmsllhsrns cktlkcpkcn whykyqqtld vhmrekhpes
      481 nshcsycsag gahprlarge syncgykpyr cevcnysttt kgnlsihmqs dkhlanlqgf
      541 qagpggqgsp peaavpppag dkepktkssw qckvcsyetn isrnlrihmt sekhlqnvlm
      601 lhqglplglp pglvgpsppp qaaaapatpp dlfqyfgpqa lgqpqaplpg pglrpdkple
      661 aqlllngfhh lgaparkfpa papgspspdt hlpqsqllga lsdglptspp pddspslkvf
      721 rclvcqafst dslelllyhc smgrslpeae wkevagdthr cklccygtql kanfqlhlkt
      781 dkhaqkyqla ahlregggav gtpspaplgd gvpygsvptl hlrcnicdfe snskekmqlh
      841 argaaheens qiykflleme gtataggpel glfrcllcaw etpsrlallq hlrapahrda
      901 qaqrrlqllq sgpaadeglp alrsilsfsh gqprphgktp vtllagpptp ekdaqnkteq
      961 lvseeaenkt gppgdsanqt tvfccpycsf lspeseqvra halsqhavqp tfrcplcqeq
     1021 lvgrpalhfh lshlhnvvpe cverlllvat tvemtlttkv lpgpalsplg dgpeppspap
     1081 epapsraqaa egphltpeas pdpvpepppp sveapdkptg spdqppspaq spaprpdaqa
     1141 eevapppama eeeegaggep rpadpapads rhpltyrktt nfaldkfldp arpykctvck
     1201 esftqknill vhynsvshlh kmkkaaidps cpareagstp ataaatdkpf kctvcrvsyn
     1261 qsstleihmr svlhqtrsrg aktdakaegp ergpeepkeg etegeagpek kgpepsgfls
     1321 glpflspppp pldlhrfpap lftppvlppf plmpesllkl qqqqlllpfy lhdlkvgpkl
     1381 alagpaplls lpaaappppp pppnaelaeq ewerptmtee gaeagppspp hptpneaart
     1441 aakallenfg felviqyneg kqavpppptp pppealgggd klacracgkl fsnmlilkth
     1501 eehvhrrflp fealsryaaq frksydslyp ppaespklpd gpldspapql gppflvpepe
     1561 aggarppeer graggrwppe edesargnlp slvpagrrfs rtkftefqtq alqsffetsa
     1621 ypkdgeverl asllglasrv vvvwfqnarq karknasdgg pvpngggtgg asgcrrchat
     1681 fscvfdlvrh lkkcyddqpa deeeeeaerg eeeeevedda eeeqgpeppa gpegpppepp
     1741 dreelsqaea tkpegkepeg rappspspvh tcdqcalsfp sqdlltshrr lhflppvqps
     1801 aaphlldlpm lvfgernplv agtppvpgpp lkrkhedgsl sptgseagvg gegepprdkr
     1861 lrttilpeql eilyrwymqd snptrkmldc iseevglkkr vvqvwfqntr arerkgqfrs
     1921 tpggvpnptv kppvtpspap fpkfnlllgk addgagreap krdtpalpyp tvtpaagplp
     1981 flppgkeapa ltpepplplp appppcedeg peepskaspe seacspsagd lsdssassla
     2041 epespgaggt sggpgggggv pdgmgqrryr tqmsslqlki mkacyeayrt ptmqecevlg
     2101 eeiglpkrvi qvwfqnarak ekkaklqgaa vggaggsseg plaaqrtdcp ycdvkydfyv
     2161 scrghlfsrq hlaklkeavr aqlkseskcy dlapapeapp apkappatpa svplgaapal
     2221 prlapvllsg palaqpplgs lapfssgpaa ssgllglats vlpattvvqt agpgcplpqr
     2281 pvpdqtkpsp agttdsapgp ppelsgdkvs geqkpvaapt nssadalknl kalkatvpal
     2341 lggqflpfsl ppagaatppa vfgpqlpgay fqqlygmkkg lfpmnpvipq tliglfpnal
     2401 lqpptqapep tatappkppe lpapregeag eadelltgsp gistvdvthr ylcrqckmaf
     2461 dgeapatahq rsfcffgrgs ggsvppplrv pvctyhclac evllsgreal ashlrssahr
     2521 rkaapppgap sgtasnaaat aavafakeea rlphtdsnpk ttttstllal
//
LOCUS       XP_061013801            2570 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger homeobox protein 2 [Dama dama].
ACCESSION   XP_061013801
VERSION     XP_061013801.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157818.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2570
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2570
                     /product="zinc finger homeobox protein 2"
                     /calculated_mol_wt=271953
     Region          <17..419
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          456..476
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          509..533
                     /region_name="zf-H2C2_5"
                     /note="C2H2-type zinc-finger domain; pfam13909"
                     /db_xref="CDD:404746"
     Region          511..528
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1196..1218
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1196,1199,1212,1218)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          1252..1270
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1597..1654
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          1859..1915
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          2067..2123
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          2453..2496
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Site            order(2460..2462,2464..2465,2469,2495,2502,2505..2509,
                     2511..2512)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275371"
     Region          2497..2519
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     CDS             1..2570
                     /gene="ZFHX2"
                     /coded_by="XM_061157818.1:195..7907"
                     /db_xref="GeneID:133066592"
ORIGIN      
        1 matlnlssvt gtipspghda pslppdtssp stpsdpvtkd apdapstses mrsseaggqp
       61 lesgcglvpp keigepqeep gcgsfppkdl gveeyeelee eegglppvdl sdhlffatgg
      121 eaclvaklfp pgdselplpk gfprgeagvq eesslpllah pppvhltalh vqhgfdpiqg
      181 fsssdqilsh dtsapspatc egrdgafwsy qlapnppgdp kdgptgsggg dpralfwfcl
      241 lcrlgfsrpq afvghtrshg vkltaaqhqg llgnpavlqe gdeacmalls flepkpparp
      301 lerpldnsst mnteanaaqi edgppaaeaq apvppmeevm alsppspqtt patwdpsptq
      361 akesptsagg agpdwfpegh eedgglcppl nqssptskeg gtlpalggsp edpgdpaqpy
      421 rladdyslap aafqglslss hmsllhsrns cktlkcpkcn whykyqqtld vhmrekhpes
      481 nshcsycsag gahprlarge syncgykpyr cevcnysttt kgnlsihmqs dkhlanlqgf
      541 qagpggqgsp peaavpppag dkepktkssw qckvcsyetn isrnlrihmt sekhlqnvlm
      601 lhqglplglp pglvgpsppp qaaaapatpp dlfqyfgpqa lgqpqaplpg pglrpdkple
      661 aqlllngfhh lgaparkfpa papgspspdt hlpqsqllga lsdglptspp pddspslkvf
      721 rclvcqafst dslelllyhc smgrslpeae wkevagdthr cklccygtql kanfqlhlkt
      781 dkhaqkyqla ahlregggav gtpspaplgd gvpygsvptl hlrcnicdfe snskekmqlh
      841 argaaheens qiykflleme gtataggpel glfrcllcaw etpsrlallq hlrapahrda
      901 qaqrrlqllq sgpaadeglp alrsilsfsh gqprphgktp vtllagpptp ekdaqnkteq
      961 lvseeaenkt gppgdsanqt tvfccpycsf lspeseqvra halsqhavqp tfrcplcqeq
     1021 lvgrpalhfh lshlhnvvpe cverlllvat tvemtlttkv lpgpalsplg dgpeppspap
     1081 epapsraqaa egphltpeas pdpvpepppp sveapdkptg spdqppspaq spaprpdaqa
     1141 eevapppama eeeegaggep rpadpapads rhpltyrktt nfaldkfldp arpykctvck
     1201 esftqknill vhynsvshlh kmkkaaidps cpareagstp ataaatdkpf kctvcrvsyn
     1261 qsstleihmr svlhqtrsrg aktdakaegp ergpeepkeg etegeagpek kgpepsgfls
     1321 glpflspppp pldlhrfpap lftppvlppf plmpesllkl qqqqlllpfy lhdlkvgpkl
     1381 alagpaplls lpaaappppp pppnaelaeq ewerptmtee gaeagppspp hptpneaart
     1441 aakallenfg felviqyneg kqavpppptp pppealgggd klacracgkl fsnmlilkth
     1501 eehvhrrflp fealsryaaq frksydslyp ppaespklpd gpldspapql gppflvpepe
     1561 aggarppeer graggrwppe edesargnlp slvpagrrfs rtkftefqtq alqsffetsa
     1621 ypkdgeverl asllglasrv vvvwfqnarq karknasdgg pvpngggtgg asgcrrchat
     1681 fscvfdlvrh lkkcyddqpa deeeeeaerg eeeeevedda eeeqgpeppa gpegpppepp
     1741 dreelsqaea tkpegkepeg rappspspvh tcdqcalsfp sqdlltshrr lhflppvqps
     1801 aaphlldlpm lvfgernplv agtppvpgpp lkrkhedgsl sptgseagvg gegepprdkr
     1861 lrttilpeql eilyrwymqd snptrkmldc iseevglkkr vvqvwfqntr arerkgqfrs
     1921 tpggvpnptv kppvtpspap fpkfnlllgk addgagreap krdtpalpyp tvtpaagplp
     1981 flppgkeapa ltpepplplp appppcedeg peepskaspe seacspsagd lsdssassla
     2041 epespgaggt sggpgggggv pdgmgqrryr tqmsslqlki mkacyeayrt ptmqecevlg
     2101 eeiglpkrvi qvwfqnarak ekkaklqgaa vggaggsseg plaaqrtdcp ycdvkydfyv
     2161 scrghlfsrq hlaklkeavr aqlkseskcy dlapapeapp apkappatpa svplgaapal
     2221 prlapvllsg palaqpplgs lapfssgpaa ssgllglats vlpattvvqt agpgcplpqr
     2281 pvpdqtkpsp agttdsapgp ppelsgdkvs geqkpvaapt nssadalknl kalkatvpal
     2341 lggqflpfsl ppagaatppa vfgpqlpgay fqqlygmkkg lfpmnpvipq tliglfpnal
     2401 lqpptqapep tatappkppe lpapregeag eadelltgsp gistvdvthr ylcrqckmaf
     2461 dgeapatahq rsfcffgrgs ggsvppplrv pvctyhclac evllsgreal ashlrssahr
     2521 rkaapppgap sgtasnaaat aavafakeea rlphtdsnpk ttttstllal
//
LOCUS       XP_061013802            2570 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger homeobox protein 2 [Dama dama].
ACCESSION   XP_061013802
VERSION     XP_061013802.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157819.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2570
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2570
                     /product="zinc finger homeobox protein 2"
                     /calculated_mol_wt=271953
     Region          <17..419
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          456..476
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          509..533
                     /region_name="zf-H2C2_5"
                     /note="C2H2-type zinc-finger domain; pfam13909"
                     /db_xref="CDD:404746"
     Region          511..528
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1196..1218
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1196,1199,1212,1218)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          1252..1270
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1597..1654
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          1859..1915
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          2067..2123
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          2453..2496
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Site            order(2460..2462,2464..2465,2469,2495,2502,2505..2509,
                     2511..2512)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275371"
     Region          2497..2519
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     CDS             1..2570
                     /gene="ZFHX2"
                     /coded_by="XM_061157819.1:312..8024"
                     /db_xref="GeneID:133066592"
ORIGIN      
        1 matlnlssvt gtipspghda pslppdtssp stpsdpvtkd apdapstses mrsseaggqp
       61 lesgcglvpp keigepqeep gcgsfppkdl gveeyeelee eegglppvdl sdhlffatgg
      121 eaclvaklfp pgdselplpk gfprgeagvq eesslpllah pppvhltalh vqhgfdpiqg
      181 fsssdqilsh dtsapspatc egrdgafwsy qlapnppgdp kdgptgsggg dpralfwfcl
      241 lcrlgfsrpq afvghtrshg vkltaaqhqg llgnpavlqe gdeacmalls flepkpparp
      301 lerpldnsst mnteanaaqi edgppaaeaq apvppmeevm alsppspqtt patwdpsptq
      361 akesptsagg agpdwfpegh eedgglcppl nqssptskeg gtlpalggsp edpgdpaqpy
      421 rladdyslap aafqglslss hmsllhsrns cktlkcpkcn whykyqqtld vhmrekhpes
      481 nshcsycsag gahprlarge syncgykpyr cevcnysttt kgnlsihmqs dkhlanlqgf
      541 qagpggqgsp peaavpppag dkepktkssw qckvcsyetn isrnlrihmt sekhlqnvlm
      601 lhqglplglp pglvgpsppp qaaaapatpp dlfqyfgpqa lgqpqaplpg pglrpdkple
      661 aqlllngfhh lgaparkfpa papgspspdt hlpqsqllga lsdglptspp pddspslkvf
      721 rclvcqafst dslelllyhc smgrslpeae wkevagdthr cklccygtql kanfqlhlkt
      781 dkhaqkyqla ahlregggav gtpspaplgd gvpygsvptl hlrcnicdfe snskekmqlh
      841 argaaheens qiykflleme gtataggpel glfrcllcaw etpsrlallq hlrapahrda
      901 qaqrrlqllq sgpaadeglp alrsilsfsh gqprphgktp vtllagpptp ekdaqnkteq
      961 lvseeaenkt gppgdsanqt tvfccpycsf lspeseqvra halsqhavqp tfrcplcqeq
     1021 lvgrpalhfh lshlhnvvpe cverlllvat tvemtlttkv lpgpalsplg dgpeppspap
     1081 epapsraqaa egphltpeas pdpvpepppp sveapdkptg spdqppspaq spaprpdaqa
     1141 eevapppama eeeegaggep rpadpapads rhpltyrktt nfaldkfldp arpykctvck
     1201 esftqknill vhynsvshlh kmkkaaidps cpareagstp ataaatdkpf kctvcrvsyn
     1261 qsstleihmr svlhqtrsrg aktdakaegp ergpeepkeg etegeagpek kgpepsgfls
     1321 glpflspppp pldlhrfpap lftppvlppf plmpesllkl qqqqlllpfy lhdlkvgpkl
     1381 alagpaplls lpaaappppp pppnaelaeq ewerptmtee gaeagppspp hptpneaart
     1441 aakallenfg felviqyneg kqavpppptp pppealgggd klacracgkl fsnmlilkth
     1501 eehvhrrflp fealsryaaq frksydslyp ppaespklpd gpldspapql gppflvpepe
     1561 aggarppeer graggrwppe edesargnlp slvpagrrfs rtkftefqtq alqsffetsa
     1621 ypkdgeverl asllglasrv vvvwfqnarq karknasdgg pvpngggtgg asgcrrchat
     1681 fscvfdlvrh lkkcyddqpa deeeeeaerg eeeeevedda eeeqgpeppa gpegpppepp
     1741 dreelsqaea tkpegkepeg rappspspvh tcdqcalsfp sqdlltshrr lhflppvqps
     1801 aaphlldlpm lvfgernplv agtppvpgpp lkrkhedgsl sptgseagvg gegepprdkr
     1861 lrttilpeql eilyrwymqd snptrkmldc iseevglkkr vvqvwfqntr arerkgqfrs
     1921 tpggvpnptv kppvtpspap fpkfnlllgk addgagreap krdtpalpyp tvtpaagplp
     1981 flppgkeapa ltpepplplp appppcedeg peepskaspe seacspsagd lsdssassla
     2041 epespgaggt sggpgggggv pdgmgqrryr tqmsslqlki mkacyeayrt ptmqecevlg
     2101 eeiglpkrvi qvwfqnarak ekkaklqgaa vggaggsseg plaaqrtdcp ycdvkydfyv
     2161 scrghlfsrq hlaklkeavr aqlkseskcy dlapapeapp apkappatpa svplgaapal
     2221 prlapvllsg palaqpplgs lapfssgpaa ssgllglats vlpattvvqt agpgcplpqr
     2281 pvpdqtkpsp agttdsapgp ppelsgdkvs geqkpvaapt nssadalknl kalkatvpal
     2341 lggqflpfsl ppagaatppa vfgpqlpgay fqqlygmkkg lfpmnpvipq tliglfpnal
     2401 lqpptqapep tatappkppe lpapregeag eadelltgsp gistvdvthr ylcrqckmaf
     2461 dgeapatahq rsfcffgrgs ggsvppplrv pvctyhclac evllsgreal ashlrssahr
     2521 rkaapppgap sgtasnaaat aavafakeea rlphtdsnpk ttttstllal
//
LOCUS       XP_061013803            2570 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger homeobox protein 2 [Dama dama].
ACCESSION   XP_061013803
VERSION     XP_061013803.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157820.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2570
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2570
                     /product="zinc finger homeobox protein 2"
                     /calculated_mol_wt=271953
     Region          <17..419
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          456..476
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          509..533
                     /region_name="zf-H2C2_5"
                     /note="C2H2-type zinc-finger domain; pfam13909"
                     /db_xref="CDD:404746"
     Region          511..528
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1196..1218
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1196,1199,1212,1218)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          1252..1270
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1597..1654
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          1859..1915
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          2067..2123
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          2453..2496
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Site            order(2460..2462,2464..2465,2469,2495,2502,2505..2509,
                     2511..2512)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275371"
     Region          2497..2519
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     CDS             1..2570
                     /gene="ZFHX2"
                     /coded_by="XM_061157820.1:795..8507"
                     /db_xref="GeneID:133066592"
ORIGIN      
        1 matlnlssvt gtipspghda pslppdtssp stpsdpvtkd apdapstses mrsseaggqp
       61 lesgcglvpp keigepqeep gcgsfppkdl gveeyeelee eegglppvdl sdhlffatgg
      121 eaclvaklfp pgdselplpk gfprgeagvq eesslpllah pppvhltalh vqhgfdpiqg
      181 fsssdqilsh dtsapspatc egrdgafwsy qlapnppgdp kdgptgsggg dpralfwfcl
      241 lcrlgfsrpq afvghtrshg vkltaaqhqg llgnpavlqe gdeacmalls flepkpparp
      301 lerpldnsst mnteanaaqi edgppaaeaq apvppmeevm alsppspqtt patwdpsptq
      361 akesptsagg agpdwfpegh eedgglcppl nqssptskeg gtlpalggsp edpgdpaqpy
      421 rladdyslap aafqglslss hmsllhsrns cktlkcpkcn whykyqqtld vhmrekhpes
      481 nshcsycsag gahprlarge syncgykpyr cevcnysttt kgnlsihmqs dkhlanlqgf
      541 qagpggqgsp peaavpppag dkepktkssw qckvcsyetn isrnlrihmt sekhlqnvlm
      601 lhqglplglp pglvgpsppp qaaaapatpp dlfqyfgpqa lgqpqaplpg pglrpdkple
      661 aqlllngfhh lgaparkfpa papgspspdt hlpqsqllga lsdglptspp pddspslkvf
      721 rclvcqafst dslelllyhc smgrslpeae wkevagdthr cklccygtql kanfqlhlkt
      781 dkhaqkyqla ahlregggav gtpspaplgd gvpygsvptl hlrcnicdfe snskekmqlh
      841 argaaheens qiykflleme gtataggpel glfrcllcaw etpsrlallq hlrapahrda
      901 qaqrrlqllq sgpaadeglp alrsilsfsh gqprphgktp vtllagpptp ekdaqnkteq
      961 lvseeaenkt gppgdsanqt tvfccpycsf lspeseqvra halsqhavqp tfrcplcqeq
     1021 lvgrpalhfh lshlhnvvpe cverlllvat tvemtlttkv lpgpalsplg dgpeppspap
     1081 epapsraqaa egphltpeas pdpvpepppp sveapdkptg spdqppspaq spaprpdaqa
     1141 eevapppama eeeegaggep rpadpapads rhpltyrktt nfaldkfldp arpykctvck
     1201 esftqknill vhynsvshlh kmkkaaidps cpareagstp ataaatdkpf kctvcrvsyn
     1261 qsstleihmr svlhqtrsrg aktdakaegp ergpeepkeg etegeagpek kgpepsgfls
     1321 glpflspppp pldlhrfpap lftppvlppf plmpesllkl qqqqlllpfy lhdlkvgpkl
     1381 alagpaplls lpaaappppp pppnaelaeq ewerptmtee gaeagppspp hptpneaart
     1441 aakallenfg felviqyneg kqavpppptp pppealgggd klacracgkl fsnmlilkth
     1501 eehvhrrflp fealsryaaq frksydslyp ppaespklpd gpldspapql gppflvpepe
     1561 aggarppeer graggrwppe edesargnlp slvpagrrfs rtkftefqtq alqsffetsa
     1621 ypkdgeverl asllglasrv vvvwfqnarq karknasdgg pvpngggtgg asgcrrchat
     1681 fscvfdlvrh lkkcyddqpa deeeeeaerg eeeeevedda eeeqgpeppa gpegpppepp
     1741 dreelsqaea tkpegkepeg rappspspvh tcdqcalsfp sqdlltshrr lhflppvqps
     1801 aaphlldlpm lvfgernplv agtppvpgpp lkrkhedgsl sptgseagvg gegepprdkr
     1861 lrttilpeql eilyrwymqd snptrkmldc iseevglkkr vvqvwfqntr arerkgqfrs
     1921 tpggvpnptv kppvtpspap fpkfnlllgk addgagreap krdtpalpyp tvtpaagplp
     1981 flppgkeapa ltpepplplp appppcedeg peepskaspe seacspsagd lsdssassla
     2041 epespgaggt sggpgggggv pdgmgqrryr tqmsslqlki mkacyeayrt ptmqecevlg
     2101 eeiglpkrvi qvwfqnarak ekkaklqgaa vggaggsseg plaaqrtdcp ycdvkydfyv
     2161 scrghlfsrq hlaklkeavr aqlkseskcy dlapapeapp apkappatpa svplgaapal
     2221 prlapvllsg palaqpplgs lapfssgpaa ssgllglats vlpattvvqt agpgcplpqr
     2281 pvpdqtkpsp agttdsapgp ppelsgdkvs geqkpvaapt nssadalknl kalkatvpal
     2341 lggqflpfsl ppagaatppa vfgpqlpgay fqqlygmkkg lfpmnpvipq tliglfpnal
     2401 lqpptqapep tatappkppe lpapregeag eadelltgsp gistvdvthr ylcrqckmaf
     2461 dgeapatahq rsfcffgrgs ggsvppplrv pvctyhclac evllsgreal ashlrssahr
     2521 rkaapppgap sgtasnaaat aavafakeea rlphtdsnpk ttttstllal
//
LOCUS       XP_061013804            2570 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger homeobox protein 2 [Dama dama].
ACCESSION   XP_061013804
VERSION     XP_061013804.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157821.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2570
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2570
                     /product="zinc finger homeobox protein 2"
                     /calculated_mol_wt=271953
     Region          <17..419
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          456..476
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          509..533
                     /region_name="zf-H2C2_5"
                     /note="C2H2-type zinc-finger domain; pfam13909"
                     /db_xref="CDD:404746"
     Region          511..528
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1196..1218
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1196,1199,1212,1218)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          1252..1270
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1597..1654
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          1859..1915
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          2067..2123
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          2453..2496
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Site            order(2460..2462,2464..2465,2469,2495,2502,2505..2509,
                     2511..2512)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275371"
     Region          2497..2519
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     CDS             1..2570
                     /gene="ZFHX2"
                     /coded_by="XM_061157821.1:201..7913"
                     /db_xref="GeneID:133066592"
ORIGIN      
        1 matlnlssvt gtipspghda pslppdtssp stpsdpvtkd apdapstses mrsseaggqp
       61 lesgcglvpp keigepqeep gcgsfppkdl gveeyeelee eegglppvdl sdhlffatgg
      121 eaclvaklfp pgdselplpk gfprgeagvq eesslpllah pppvhltalh vqhgfdpiqg
      181 fsssdqilsh dtsapspatc egrdgafwsy qlapnppgdp kdgptgsggg dpralfwfcl
      241 lcrlgfsrpq afvghtrshg vkltaaqhqg llgnpavlqe gdeacmalls flepkpparp
      301 lerpldnsst mnteanaaqi edgppaaeaq apvppmeevm alsppspqtt patwdpsptq
      361 akesptsagg agpdwfpegh eedgglcppl nqssptskeg gtlpalggsp edpgdpaqpy
      421 rladdyslap aafqglslss hmsllhsrns cktlkcpkcn whykyqqtld vhmrekhpes
      481 nshcsycsag gahprlarge syncgykpyr cevcnysttt kgnlsihmqs dkhlanlqgf
      541 qagpggqgsp peaavpppag dkepktkssw qckvcsyetn isrnlrihmt sekhlqnvlm
      601 lhqglplglp pglvgpsppp qaaaapatpp dlfqyfgpqa lgqpqaplpg pglrpdkple
      661 aqlllngfhh lgaparkfpa papgspspdt hlpqsqllga lsdglptspp pddspslkvf
      721 rclvcqafst dslelllyhc smgrslpeae wkevagdthr cklccygtql kanfqlhlkt
      781 dkhaqkyqla ahlregggav gtpspaplgd gvpygsvptl hlrcnicdfe snskekmqlh
      841 argaaheens qiykflleme gtataggpel glfrcllcaw etpsrlallq hlrapahrda
      901 qaqrrlqllq sgpaadeglp alrsilsfsh gqprphgktp vtllagpptp ekdaqnkteq
      961 lvseeaenkt gppgdsanqt tvfccpycsf lspeseqvra halsqhavqp tfrcplcqeq
     1021 lvgrpalhfh lshlhnvvpe cverlllvat tvemtlttkv lpgpalsplg dgpeppspap
     1081 epapsraqaa egphltpeas pdpvpepppp sveapdkptg spdqppspaq spaprpdaqa
     1141 eevapppama eeeegaggep rpadpapads rhpltyrktt nfaldkfldp arpykctvck
     1201 esftqknill vhynsvshlh kmkkaaidps cpareagstp ataaatdkpf kctvcrvsyn
     1261 qsstleihmr svlhqtrsrg aktdakaegp ergpeepkeg etegeagpek kgpepsgfls
     1321 glpflspppp pldlhrfpap lftppvlppf plmpesllkl qqqqlllpfy lhdlkvgpkl
     1381 alagpaplls lpaaappppp pppnaelaeq ewerptmtee gaeagppspp hptpneaart
     1441 aakallenfg felviqyneg kqavpppptp pppealgggd klacracgkl fsnmlilkth
     1501 eehvhrrflp fealsryaaq frksydslyp ppaespklpd gpldspapql gppflvpepe
     1561 aggarppeer graggrwppe edesargnlp slvpagrrfs rtkftefqtq alqsffetsa
     1621 ypkdgeverl asllglasrv vvvwfqnarq karknasdgg pvpngggtgg asgcrrchat
     1681 fscvfdlvrh lkkcyddqpa deeeeeaerg eeeeevedda eeeqgpeppa gpegpppepp
     1741 dreelsqaea tkpegkepeg rappspspvh tcdqcalsfp sqdlltshrr lhflppvqps
     1801 aaphlldlpm lvfgernplv agtppvpgpp lkrkhedgsl sptgseagvg gegepprdkr
     1861 lrttilpeql eilyrwymqd snptrkmldc iseevglkkr vvqvwfqntr arerkgqfrs
     1921 tpggvpnptv kppvtpspap fpkfnlllgk addgagreap krdtpalpyp tvtpaagplp
     1981 flppgkeapa ltpepplplp appppcedeg peepskaspe seacspsagd lsdssassla
     2041 epespgaggt sggpgggggv pdgmgqrryr tqmsslqlki mkacyeayrt ptmqecevlg
     2101 eeiglpkrvi qvwfqnarak ekkaklqgaa vggaggsseg plaaqrtdcp ycdvkydfyv
     2161 scrghlfsrq hlaklkeavr aqlkseskcy dlapapeapp apkappatpa svplgaapal
     2221 prlapvllsg palaqpplgs lapfssgpaa ssgllglats vlpattvvqt agpgcplpqr
     2281 pvpdqtkpsp agttdsapgp ppelsgdkvs geqkpvaapt nssadalknl kalkatvpal
     2341 lggqflpfsl ppagaatppa vfgpqlpgay fqqlygmkkg lfpmnpvipq tliglfpnal
     2401 lqpptqapep tatappkppe lpapregeag eadelltgsp gistvdvthr ylcrqckmaf
     2461 dgeapatahq rsfcffgrgs ggsvppplrv pvctyhclac evllsgreal ashlrssahr
     2521 rkaapppgap sgtasnaaat aavafakeea rlphtdsnpk ttttstllal
//
LOCUS       XP_061013805            2570 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger homeobox protein 2 [Dama dama].
ACCESSION   XP_061013805
VERSION     XP_061013805.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157822.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2570
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2570
                     /product="zinc finger homeobox protein 2"
                     /calculated_mol_wt=271953
     Region          <17..419
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          456..476
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          509..533
                     /region_name="zf-H2C2_5"
                     /note="C2H2-type zinc-finger domain; pfam13909"
                     /db_xref="CDD:404746"
     Region          511..528
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1196..1218
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1196,1199,1212,1218)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          1252..1270
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1597..1654
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          1859..1915
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          2067..2123
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          2453..2496
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Site            order(2460..2462,2464..2465,2469,2495,2502,2505..2509,
                     2511..2512)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275371"
     Region          2497..2519
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     CDS             1..2570
                     /gene="ZFHX2"
                     /coded_by="XM_061157822.1:89..7801"
                     /db_xref="GeneID:133066592"
ORIGIN      
        1 matlnlssvt gtipspghda pslppdtssp stpsdpvtkd apdapstses mrsseaggqp
       61 lesgcglvpp keigepqeep gcgsfppkdl gveeyeelee eegglppvdl sdhlffatgg
      121 eaclvaklfp pgdselplpk gfprgeagvq eesslpllah pppvhltalh vqhgfdpiqg
      181 fsssdqilsh dtsapspatc egrdgafwsy qlapnppgdp kdgptgsggg dpralfwfcl
      241 lcrlgfsrpq afvghtrshg vkltaaqhqg llgnpavlqe gdeacmalls flepkpparp
      301 lerpldnsst mnteanaaqi edgppaaeaq apvppmeevm alsppspqtt patwdpsptq
      361 akesptsagg agpdwfpegh eedgglcppl nqssptskeg gtlpalggsp edpgdpaqpy
      421 rladdyslap aafqglslss hmsllhsrns cktlkcpkcn whykyqqtld vhmrekhpes
      481 nshcsycsag gahprlarge syncgykpyr cevcnysttt kgnlsihmqs dkhlanlqgf
      541 qagpggqgsp peaavpppag dkepktkssw qckvcsyetn isrnlrihmt sekhlqnvlm
      601 lhqglplglp pglvgpsppp qaaaapatpp dlfqyfgpqa lgqpqaplpg pglrpdkple
      661 aqlllngfhh lgaparkfpa papgspspdt hlpqsqllga lsdglptspp pddspslkvf
      721 rclvcqafst dslelllyhc smgrslpeae wkevagdthr cklccygtql kanfqlhlkt
      781 dkhaqkyqla ahlregggav gtpspaplgd gvpygsvptl hlrcnicdfe snskekmqlh
      841 argaaheens qiykflleme gtataggpel glfrcllcaw etpsrlallq hlrapahrda
      901 qaqrrlqllq sgpaadeglp alrsilsfsh gqprphgktp vtllagpptp ekdaqnkteq
      961 lvseeaenkt gppgdsanqt tvfccpycsf lspeseqvra halsqhavqp tfrcplcqeq
     1021 lvgrpalhfh lshlhnvvpe cverlllvat tvemtlttkv lpgpalsplg dgpeppspap
     1081 epapsraqaa egphltpeas pdpvpepppp sveapdkptg spdqppspaq spaprpdaqa
     1141 eevapppama eeeegaggep rpadpapads rhpltyrktt nfaldkfldp arpykctvck
     1201 esftqknill vhynsvshlh kmkkaaidps cpareagstp ataaatdkpf kctvcrvsyn
     1261 qsstleihmr svlhqtrsrg aktdakaegp ergpeepkeg etegeagpek kgpepsgfls
     1321 glpflspppp pldlhrfpap lftppvlppf plmpesllkl qqqqlllpfy lhdlkvgpkl
     1381 alagpaplls lpaaappppp pppnaelaeq ewerptmtee gaeagppspp hptpneaart
     1441 aakallenfg felviqyneg kqavpppptp pppealgggd klacracgkl fsnmlilkth
     1501 eehvhrrflp fealsryaaq frksydslyp ppaespklpd gpldspapql gppflvpepe
     1561 aggarppeer graggrwppe edesargnlp slvpagrrfs rtkftefqtq alqsffetsa
     1621 ypkdgeverl asllglasrv vvvwfqnarq karknasdgg pvpngggtgg asgcrrchat
     1681 fscvfdlvrh lkkcyddqpa deeeeeaerg eeeeevedda eeeqgpeppa gpegpppepp
     1741 dreelsqaea tkpegkepeg rappspspvh tcdqcalsfp sqdlltshrr lhflppvqps
     1801 aaphlldlpm lvfgernplv agtppvpgpp lkrkhedgsl sptgseagvg gegepprdkr
     1861 lrttilpeql eilyrwymqd snptrkmldc iseevglkkr vvqvwfqntr arerkgqfrs
     1921 tpggvpnptv kppvtpspap fpkfnlllgk addgagreap krdtpalpyp tvtpaagplp
     1981 flppgkeapa ltpepplplp appppcedeg peepskaspe seacspsagd lsdssassla
     2041 epespgaggt sggpgggggv pdgmgqrryr tqmsslqlki mkacyeayrt ptmqecevlg
     2101 eeiglpkrvi qvwfqnarak ekkaklqgaa vggaggsseg plaaqrtdcp ycdvkydfyv
     2161 scrghlfsrq hlaklkeavr aqlkseskcy dlapapeapp apkappatpa svplgaapal
     2221 prlapvllsg palaqpplgs lapfssgpaa ssgllglats vlpattvvqt agpgcplpqr
     2281 pvpdqtkpsp agttdsapgp ppelsgdkvs geqkpvaapt nssadalknl kalkatvpal
     2341 lggqflpfsl ppagaatppa vfgpqlpgay fqqlygmkkg lfpmnpvipq tliglfpnal
     2401 lqpptqapep tatappkppe lpapregeag eadelltgsp gistvdvthr ylcrqckmaf
     2461 dgeapatahq rsfcffgrgs ggsvppplrv pvctyhclac evllsgreal ashlrssahr
     2521 rkaapppgap sgtasnaaat aavafakeea rlphtdsnpk ttttstllal
//
LOCUS       XP_061013806            2570 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger homeobox protein 2 [Dama dama].
ACCESSION   XP_061013806
VERSION     XP_061013806.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157823.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2570
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2570
                     /product="zinc finger homeobox protein 2"
                     /calculated_mol_wt=271953
     Region          <17..419
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          456..476
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          509..533
                     /region_name="zf-H2C2_5"
                     /note="C2H2-type zinc-finger domain; pfam13909"
                     /db_xref="CDD:404746"
     Region          511..528
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1196..1218
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1196,1199,1212,1218)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          1252..1270
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1597..1654
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          1859..1915
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          2067..2123
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          2453..2496
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Site            order(2460..2462,2464..2465,2469,2495,2502,2505..2509,
                     2511..2512)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275371"
     Region          2497..2519
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     CDS             1..2570
                     /gene="ZFHX2"
                     /coded_by="XM_061157823.1:96..7808"
                     /db_xref="GeneID:133066592"
ORIGIN      
        1 matlnlssvt gtipspghda pslppdtssp stpsdpvtkd apdapstses mrsseaggqp
       61 lesgcglvpp keigepqeep gcgsfppkdl gveeyeelee eegglppvdl sdhlffatgg
      121 eaclvaklfp pgdselplpk gfprgeagvq eesslpllah pppvhltalh vqhgfdpiqg
      181 fsssdqilsh dtsapspatc egrdgafwsy qlapnppgdp kdgptgsggg dpralfwfcl
      241 lcrlgfsrpq afvghtrshg vkltaaqhqg llgnpavlqe gdeacmalls flepkpparp
      301 lerpldnsst mnteanaaqi edgppaaeaq apvppmeevm alsppspqtt patwdpsptq
      361 akesptsagg agpdwfpegh eedgglcppl nqssptskeg gtlpalggsp edpgdpaqpy
      421 rladdyslap aafqglslss hmsllhsrns cktlkcpkcn whykyqqtld vhmrekhpes
      481 nshcsycsag gahprlarge syncgykpyr cevcnysttt kgnlsihmqs dkhlanlqgf
      541 qagpggqgsp peaavpppag dkepktkssw qckvcsyetn isrnlrihmt sekhlqnvlm
      601 lhqglplglp pglvgpsppp qaaaapatpp dlfqyfgpqa lgqpqaplpg pglrpdkple
      661 aqlllngfhh lgaparkfpa papgspspdt hlpqsqllga lsdglptspp pddspslkvf
      721 rclvcqafst dslelllyhc smgrslpeae wkevagdthr cklccygtql kanfqlhlkt
      781 dkhaqkyqla ahlregggav gtpspaplgd gvpygsvptl hlrcnicdfe snskekmqlh
      841 argaaheens qiykflleme gtataggpel glfrcllcaw etpsrlallq hlrapahrda
      901 qaqrrlqllq sgpaadeglp alrsilsfsh gqprphgktp vtllagpptp ekdaqnkteq
      961 lvseeaenkt gppgdsanqt tvfccpycsf lspeseqvra halsqhavqp tfrcplcqeq
     1021 lvgrpalhfh lshlhnvvpe cverlllvat tvemtlttkv lpgpalsplg dgpeppspap
     1081 epapsraqaa egphltpeas pdpvpepppp sveapdkptg spdqppspaq spaprpdaqa
     1141 eevapppama eeeegaggep rpadpapads rhpltyrktt nfaldkfldp arpykctvck
     1201 esftqknill vhynsvshlh kmkkaaidps cpareagstp ataaatdkpf kctvcrvsyn
     1261 qsstleihmr svlhqtrsrg aktdakaegp ergpeepkeg etegeagpek kgpepsgfls
     1321 glpflspppp pldlhrfpap lftppvlppf plmpesllkl qqqqlllpfy lhdlkvgpkl
     1381 alagpaplls lpaaappppp pppnaelaeq ewerptmtee gaeagppspp hptpneaart
     1441 aakallenfg felviqyneg kqavpppptp pppealgggd klacracgkl fsnmlilkth
     1501 eehvhrrflp fealsryaaq frksydslyp ppaespklpd gpldspapql gppflvpepe
     1561 aggarppeer graggrwppe edesargnlp slvpagrrfs rtkftefqtq alqsffetsa
     1621 ypkdgeverl asllglasrv vvvwfqnarq karknasdgg pvpngggtgg asgcrrchat
     1681 fscvfdlvrh lkkcyddqpa deeeeeaerg eeeeevedda eeeqgpeppa gpegpppepp
     1741 dreelsqaea tkpegkepeg rappspspvh tcdqcalsfp sqdlltshrr lhflppvqps
     1801 aaphlldlpm lvfgernplv agtppvpgpp lkrkhedgsl sptgseagvg gegepprdkr
     1861 lrttilpeql eilyrwymqd snptrkmldc iseevglkkr vvqvwfqntr arerkgqfrs
     1921 tpggvpnptv kppvtpspap fpkfnlllgk addgagreap krdtpalpyp tvtpaagplp
     1981 flppgkeapa ltpepplplp appppcedeg peepskaspe seacspsagd lsdssassla
     2041 epespgaggt sggpgggggv pdgmgqrryr tqmsslqlki mkacyeayrt ptmqecevlg
     2101 eeiglpkrvi qvwfqnarak ekkaklqgaa vggaggsseg plaaqrtdcp ycdvkydfyv
     2161 scrghlfsrq hlaklkeavr aqlkseskcy dlapapeapp apkappatpa svplgaapal
     2221 prlapvllsg palaqpplgs lapfssgpaa ssgllglats vlpattvvqt agpgcplpqr
     2281 pvpdqtkpsp agttdsapgp ppelsgdkvs geqkpvaapt nssadalknl kalkatvpal
     2341 lggqflpfsl ppagaatppa vfgpqlpgay fqqlygmkkg lfpmnpvipq tliglfpnal
     2401 lqpptqapep tatappkppe lpapregeag eadelltgsp gistvdvthr ylcrqckmaf
     2461 dgeapatahq rsfcffgrgs ggsvppplrv pvctyhclac evllsgreal ashlrssahr
     2521 rkaapppgap sgtasnaaat aavafakeea rlphtdsnpk ttttstllal
//
LOCUS       XP_061013807            2570 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger homeobox protein 2 [Dama dama].
ACCESSION   XP_061013807
VERSION     XP_061013807.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157824.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2570
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2570
                     /product="zinc finger homeobox protein 2"
                     /calculated_mol_wt=271953
     Region          <17..419
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          456..476
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          509..533
                     /region_name="zf-H2C2_5"
                     /note="C2H2-type zinc-finger domain; pfam13909"
                     /db_xref="CDD:404746"
     Region          511..528
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1196..1218
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1196,1199,1212,1218)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          1252..1270
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1597..1654
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          1859..1915
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          2067..2123
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          2453..2496
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Site            order(2460..2462,2464..2465,2469,2495,2502,2505..2509,
                     2511..2512)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275371"
     Region          2497..2519
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     CDS             1..2570
                     /gene="ZFHX2"
                     /coded_by="XM_061157824.1:584..8296"
                     /db_xref="GeneID:133066592"
ORIGIN      
        1 matlnlssvt gtipspghda pslppdtssp stpsdpvtkd apdapstses mrsseaggqp
       61 lesgcglvpp keigepqeep gcgsfppkdl gveeyeelee eegglppvdl sdhlffatgg
      121 eaclvaklfp pgdselplpk gfprgeagvq eesslpllah pppvhltalh vqhgfdpiqg
      181 fsssdqilsh dtsapspatc egrdgafwsy qlapnppgdp kdgptgsggg dpralfwfcl
      241 lcrlgfsrpq afvghtrshg vkltaaqhqg llgnpavlqe gdeacmalls flepkpparp
      301 lerpldnsst mnteanaaqi edgppaaeaq apvppmeevm alsppspqtt patwdpsptq
      361 akesptsagg agpdwfpegh eedgglcppl nqssptskeg gtlpalggsp edpgdpaqpy
      421 rladdyslap aafqglslss hmsllhsrns cktlkcpkcn whykyqqtld vhmrekhpes
      481 nshcsycsag gahprlarge syncgykpyr cevcnysttt kgnlsihmqs dkhlanlqgf
      541 qagpggqgsp peaavpppag dkepktkssw qckvcsyetn isrnlrihmt sekhlqnvlm
      601 lhqglplglp pglvgpsppp qaaaapatpp dlfqyfgpqa lgqpqaplpg pglrpdkple
      661 aqlllngfhh lgaparkfpa papgspspdt hlpqsqllga lsdglptspp pddspslkvf
      721 rclvcqafst dslelllyhc smgrslpeae wkevagdthr cklccygtql kanfqlhlkt
      781 dkhaqkyqla ahlregggav gtpspaplgd gvpygsvptl hlrcnicdfe snskekmqlh
      841 argaaheens qiykflleme gtataggpel glfrcllcaw etpsrlallq hlrapahrda
      901 qaqrrlqllq sgpaadeglp alrsilsfsh gqprphgktp vtllagpptp ekdaqnkteq
      961 lvseeaenkt gppgdsanqt tvfccpycsf lspeseqvra halsqhavqp tfrcplcqeq
     1021 lvgrpalhfh lshlhnvvpe cverlllvat tvemtlttkv lpgpalsplg dgpeppspap
     1081 epapsraqaa egphltpeas pdpvpepppp sveapdkptg spdqppspaq spaprpdaqa
     1141 eevapppama eeeegaggep rpadpapads rhpltyrktt nfaldkfldp arpykctvck
     1201 esftqknill vhynsvshlh kmkkaaidps cpareagstp ataaatdkpf kctvcrvsyn
     1261 qsstleihmr svlhqtrsrg aktdakaegp ergpeepkeg etegeagpek kgpepsgfls
     1321 glpflspppp pldlhrfpap lftppvlppf plmpesllkl qqqqlllpfy lhdlkvgpkl
     1381 alagpaplls lpaaappppp pppnaelaeq ewerptmtee gaeagppspp hptpneaart
     1441 aakallenfg felviqyneg kqavpppptp pppealgggd klacracgkl fsnmlilkth
     1501 eehvhrrflp fealsryaaq frksydslyp ppaespklpd gpldspapql gppflvpepe
     1561 aggarppeer graggrwppe edesargnlp slvpagrrfs rtkftefqtq alqsffetsa
     1621 ypkdgeverl asllglasrv vvvwfqnarq karknasdgg pvpngggtgg asgcrrchat
     1681 fscvfdlvrh lkkcyddqpa deeeeeaerg eeeeevedda eeeqgpeppa gpegpppepp
     1741 dreelsqaea tkpegkepeg rappspspvh tcdqcalsfp sqdlltshrr lhflppvqps
     1801 aaphlldlpm lvfgernplv agtppvpgpp lkrkhedgsl sptgseagvg gegepprdkr
     1861 lrttilpeql eilyrwymqd snptrkmldc iseevglkkr vvqvwfqntr arerkgqfrs
     1921 tpggvpnptv kppvtpspap fpkfnlllgk addgagreap krdtpalpyp tvtpaagplp
     1981 flppgkeapa ltpepplplp appppcedeg peepskaspe seacspsagd lsdssassla
     2041 epespgaggt sggpgggggv pdgmgqrryr tqmsslqlki mkacyeayrt ptmqecevlg
     2101 eeiglpkrvi qvwfqnarak ekkaklqgaa vggaggsseg plaaqrtdcp ycdvkydfyv
     2161 scrghlfsrq hlaklkeavr aqlkseskcy dlapapeapp apkappatpa svplgaapal
     2221 prlapvllsg palaqpplgs lapfssgpaa ssgllglats vlpattvvqt agpgcplpqr
     2281 pvpdqtkpsp agttdsapgp ppelsgdkvs geqkpvaapt nssadalknl kalkatvpal
     2341 lggqflpfsl ppagaatppa vfgpqlpgay fqqlygmkkg lfpmnpvipq tliglfpnal
     2401 lqpptqapep tatappkppe lpapregeag eadelltgsp gistvdvthr ylcrqckmaf
     2461 dgeapatahq rsfcffgrgs ggsvppplrv pvctyhclac evllsgreal ashlrssahr
     2521 rkaapppgap sgtasnaaat aavafakeea rlphtdsnpk ttttstllal
//
LOCUS       XP_061013809             785 aa            linear   MAM 02-DEC-2023
DEFINITION  AP-1 complex subunit gamma-like 2 isoform X1 [Dama dama].
ACCESSION   XP_061013809
VERSION     XP_061013809.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157826.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..785
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..785
                     /product="AP-1 complex subunit gamma-like 2 isoform X1"
                     /calculated_mol_wt=86644
     Region          24..575
                     /region_name="Adaptin_N"
                     /note="Adaptin N terminal region; pfam01602"
                     /db_xref="CDD:396262"
     Region          311..335
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            order(327..328,331,334..335,365..366,369,372..373,376,
                     399..400,403,406..407,410,436..437,440,443..444,476..477)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          347..376
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          386..411
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          422..444
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          672..780
                     /region_name="Alpha_adaptinC2"
                     /note="Adaptin C-terminal domain; smart00809"
                     /db_xref="CDD:197886"
     CDS             1..785
                     /gene="AP1G2"
                     /coded_by="XM_061157826.1:90..2447"
                     /db_xref="GeneID:133066594"
ORIGIN      
        1 mvasslklqe liqeireakt qaqereviqk ecahirasfr dgdplhrhrq lakllyahml
       61 gypahfgqme clkliasprf tdkrvgylga mlllderqda hllitnsikn dlsqgieavq
      121 glalctlsam gsaemcrdla peveklllqp gayvrkkavl tavhmirkvp elsdiflppc
      181 aqllherhhg illgtvtlit elcerspaal khfrkvvpql vhtlrtlvmt gcstehsvsg
      241 vsdpflqvqi lrllrilgrn heessetmnd llaqvatntd asrnagsavl fetvltimdi
      301 rsaaglrvla vnilgrflln sdrniryval tsllklvqsd hsavqrhrpt vveclrepda
      361 slsrralels lalvnssnvr tmtqelqgfl escppdlrad casgillaae rfaptkrwhi
      421 dtilrvltta gsyvrdeava nlvqliggaq elhaysvrrl ysalaedisq qplvqvaawc
      481 igeygdllle gtceeteplq veedvvltll ervlqshmsl patrgyalta lmklstrlhg
      541 dnnricqvms iygschdvel qqraveynal frkydhlraa vlekmplver ggpqvneeak
      601 eskevaqlse aapvptetqa sklldlldll dgpsenaqhh ppldptpgdt lihlldlpca
      661 plpsapipnl kvfereglql tlsfvrppgt ptlllitvta tntsggdvth ficqaavpks
      721 fqlqlqapsg dtvpaqgglp mtqllrilnp nkaplrlklr ltydhfgqsv qeifevnnlp
      781 vetwq
//
LOCUS       XP_061013810             621 aa            linear   MAM 02-DEC-2023
DEFINITION  AP-1 complex subunit gamma-like 2 isoform X2 [Dama dama].
ACCESSION   XP_061013810
VERSION     XP_061013810.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157827.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..621
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..621
                     /product="AP-1 complex subunit gamma-like 2 isoform X2"
                     /calculated_mol_wt=68319
     Region          <1..411
                     /region_name="Adaptin_N"
                     /note="Adaptin N terminal region; pfam01602"
                     /db_xref="CDD:396262"
     Region          147..171
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            order(163..164,167,170..171,201..202,205,208..209,212,
                     235..236,239,242..243,246,272..273,276,279..280,312..313)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          183..212
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          222..247
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          258..280
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          508..616
                     /region_name="Alpha_adaptinC2"
                     /note="Adaptin C-terminal domain; smart00809"
                     /db_xref="CDD:197886"
     CDS             1..621
                     /gene="AP1G2"
                     /coded_by="XM_061157827.1:294..2159"
                     /db_xref="GeneID:133066594"
ORIGIN      
        1 mirkvpelsd iflppcaqll herhhgillg tvtlitelce rspaalkhfr kvvpqlvhtl
       61 rtlvmtgcst ehsvsgvsdp flqvqilrll rilgrnhees setmndllaq vatntdasrn
      121 agsavlfetv ltimdirsaa glrvlavnil grfllnsdrn iryvaltsll klvqsdhsav
      181 qrhrptvvec lrepdaslsr ralelslalv nssnvrtmtq elqgflescp pdlradcasg
      241 illaaerfap tkrwhidtil rvlttagsyv rdeavanlvq liggaqelha ysvrrlysal
      301 aedisqqplv qvaawcigey gdlllegtce eteplqveed vvltllervl qshmslpatr
      361 gyaltalmkl strlhgdnnr icqvmsiygs chdvelqqra veynalfrky dhlraavlek
      421 mplverggpq vneeakeske vaqlseaapv ptetqaskll dlldlldgps enaqhhppld
      481 ptpgdtlihl ldlpcaplps apipnlkvfe reglqltlsf vrppgtptll litvtatnts
      541 ggdvthficq aavpksfqlq lqapsgdtvp aqgglpmtql lrilnpnkap lrlklrltyd
      601 hfgqsvqeif evnnlpvetw q
//
LOCUS       XP_061013811             575 aa            linear   MAM 02-DEC-2023
DEFINITION  AP-1 complex subunit gamma-like 2 isoform X3 [Dama dama].
ACCESSION   XP_061013811
VERSION     XP_061013811.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157828.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..575
                     /product="AP-1 complex subunit gamma-like 2 isoform X3"
                     /calculated_mol_wt=63056
     Region          <7..365
                     /region_name="Adaptin_N"
                     /note="Adaptin N terminal region; pfam01602"
                     /db_xref="CDD:396262"
     Region          101..125
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            order(117..118,121,124..125,155..156,159,162..163,166,
                     189..190,193,196..197,200,226..227,230,233..234,266..267)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          137..166
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          176..201
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          212..234
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          462..570
                     /region_name="Alpha_adaptinC2"
                     /note="Adaptin C-terminal domain; smart00809"
                     /db_xref="CDD:197886"
     CDS             1..575
                     /gene="AP1G2"
                     /coded_by="XM_061157828.1:344..2071"
                     /db_xref="GeneID:133066594"
ORIGIN      
        1 mnatmvvpql vhtlrtlvmt gcstehsvsg vsdpflqvqi lrllrilgrn heessetmnd
       61 llaqvatntd asrnagsavl fetvltimdi rsaaglrvla vnilgrflln sdrniryval
      121 tsllklvqsd hsavqrhrpt vveclrepda slsrralels lalvnssnvr tmtqelqgfl
      181 escppdlrad casgillaae rfaptkrwhi dtilrvltta gsyvrdeava nlvqliggaq
      241 elhaysvrrl ysalaedisq qplvqvaawc igeygdllle gtceeteplq veedvvltll
      301 ervlqshmsl patrgyalta lmklstrlhg dnnricqvms iygschdvel qqraveynal
      361 frkydhlraa vlekmplver ggpqvneeak eskevaqlse aapvptetqa sklldlldll
      421 dgpsenaqhh ppldptpgdt lihlldlpca plpsapipnl kvfereglql tlsfvrppgt
      481 ptlllitvta tntsggdvth ficqaavpks fqlqlqapsg dtvpaqgglp mtqllrilnp
      541 nkaplrlklr ltydhfgqsv qeifevnnlp vetwq
//
LOCUS       XP_061013812             575 aa            linear   MAM 02-DEC-2023
DEFINITION  AP-1 complex subunit gamma-like 2 isoform X3 [Dama dama].
ACCESSION   XP_061013812
VERSION     XP_061013812.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157829.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..575
                     /product="AP-1 complex subunit gamma-like 2 isoform X3"
                     /calculated_mol_wt=63056
     Region          <7..365
                     /region_name="Adaptin_N"
                     /note="Adaptin N terminal region; pfam01602"
                     /db_xref="CDD:396262"
     Region          101..125
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            order(117..118,121,124..125,155..156,159,162..163,166,
                     189..190,193,196..197,200,226..227,230,233..234,266..267)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          137..166
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          176..201
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          212..234
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          462..570
                     /region_name="Alpha_adaptinC2"
                     /note="Adaptin C-terminal domain; smart00809"
                     /db_xref="CDD:197886"
     CDS             1..575
                     /gene="AP1G2"
                     /coded_by="XM_061157829.1:354..2081"
                     /db_xref="GeneID:133066594"
ORIGIN      
        1 mnatmvvpql vhtlrtlvmt gcstehsvsg vsdpflqvqi lrllrilgrn heessetmnd
       61 llaqvatntd asrnagsavl fetvltimdi rsaaglrvla vnilgrflln sdrniryval
      121 tsllklvqsd hsavqrhrpt vveclrepda slsrralels lalvnssnvr tmtqelqgfl
      181 escppdlrad casgillaae rfaptkrwhi dtilrvltta gsyvrdeava nlvqliggaq
      241 elhaysvrrl ysalaedisq qplvqvaawc igeygdllle gtceeteplq veedvvltll
      301 ervlqshmsl patrgyalta lmklstrlhg dnnricqvms iygschdvel qqraveynal
      361 frkydhlraa vlekmplver ggpqvneeak eskevaqlse aapvptetqa sklldlldll
      421 dgpsenaqhh ppldptpgdt lihlldlpca plpsapipnl kvfereglql tlsfvrppgt
      481 ptlllitvta tntsggdvth ficqaavpks fqlqlqapsg dtvpaqgglp mtqllrilnp
      541 nkaplrlklr ltydhfgqsv qeifevnnlp vetwq
//
LOCUS       XP_061013813             224 aa            linear   MAM 02-DEC-2023
DEFINITION  thiamine-triphosphatase [Dama dama].
ACCESSION   XP_061013813
VERSION     XP_061013813.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157830.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..224
                     /product="thiamine-triphosphatase"
                     /calculated_mol_wt=24236
     Region          6..203
                     /region_name="ThTPase"
                     /note="Thiamine Triphosphatase; cd07758"
                     /db_xref="CDD:143625"
     Site            order(7..11,39,53,55,57,63,65,79,81,128,130,149..150,152,
                     155,158,160,162,164..165,197..201)
                     /site_type="active"
                     /note="putative active site pocket [active]"
                     /db_xref="CDD:143625"
     Site            order(7,9..11,39,53,55,65,79,81,128,130,152,155,162,
                     197..198)
                     /site_type="other"
                     /note="putative substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:143625"
     Site            order(7,9,150,162,164)
                     /site_type="other"
                     /note="putative metal binding residues [ion binding]"
                     /db_xref="CDD:143625"
     Site            order(7,9,11)
                     /site_type="active"
                     /note="signature motif [active]"
                     /db_xref="CDD:143625"
     Site            order(36,38,40,56,58,121..127,155..156,202)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:143625"
     CDS             1..224
                     /gene="THTPA"
                     /coded_by="XM_061157830.1:353..1027"
                     /db_xref="GeneID:133066595"
ORIGIN      
        1 margliever kfvpgpgtee rlqelggtle hrvtfrdsyy dtpelslmra dywlrqregs
       61 gwelkcpgaa svsgphteyt eltaepsivv qlcevlgagv pgagvpgagg vaallgplgl
      121 qlvasfvtkr sawklvlsga dgeqrllrvd ldtadfgyav gevealvqke tevpaaleki
      181 hhlssllgvl aqerapakli vylqrfrpqd yqrllevygs kvkp
//
LOCUS       XP_061013814             279 aa            linear   MAM 02-DEC-2023
DEFINITION  dehydrogenase/reductase SDR family member 4 [Dama dama].
ACCESSION   XP_061013814
VERSION     XP_061013814.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157831.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..279
                     /product="dehydrogenase/reductase SDR family member 4"
                     /calculated_mol_wt=29297
     Region          24..279
                     /region_name="CR_SDR_c"
                     /note="Porcine peroxisomal carbonyl reductase like,
                     classical (c) SDR; cd08936"
                     /db_xref="CDD:187641"
     Site            order(40..45,64..66,69,89..91,117..119,168..170,183,187,
                     213..216,218..221)
                     /site_type="other"
                     /note="NADP binding site [chemical binding]"
                     /db_xref="CDD:187641"
     Site            order(52,125..129,132,135..136,140,144,147..148,150..151,
                     173..174,176,181,184..185,188..189,191..193,195..197,200,
                     205,215,240..244,248,251..252,255,260,262..265,267..274,
                     276..279)
                     /site_type="other"
                     /note="homotetramer interface [polypeptide binding]"
                     /db_xref="CDD:187641"
     Site            order(125..129,132,135..136,140,143..144,147..148,
                     150..151,154,176,178..179,181,184..185,188..189,192..193,
                     195..197,199..200)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:187641"
     Site            order(142,170,183,187)
                     /site_type="active"
                     /db_xref="CDD:187641"
     CDS             1..279
                     /gene="LOC133066596"
                     /coded_by="XM_061157831.1:165..1004"
                     /db_xref="GeneID:133066596"
ORIGIN      
        1 mlkvglllga carswksvrm assgvarrnp lankvalvta stdgigfaia rrlaqdgahv
       61 vvssrkqqnv dravatlqge glsvtgtvch vgkaedrerl vatavklhgg vdilisnaav
      121 npflgslmdv teevwdkmld invkatallt kavvpemakr gggsivivss iaayspfpsl
      181 gpynisktal lgltknlaie laqwnirvnc lapgliktsf srvlwedqar lesikaamqi
      241 krigkpedca gvvsflcsed anyitgetvv vaggapshl
//
LOCUS       XP_061013815             637 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphoenolpyruvate carboxykinase [GTP], mitochondrial [Dama dama].
ACCESSION   XP_061013815
VERSION     XP_061013815.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157832.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..637
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..637
                     /product="phosphoenolpyruvate carboxykinase [GTP],
                     mitochondrial"
                     /calculated_mol_wt=70297
     Region          41..630
                     /region_name="PEPCK_GTP"
                     /note="Phosphoenolpyruvate carboxykinase (PEPCK), a
                     critical gluconeogenic enzyme, catalyzes the first
                     committed step in the diversion of tricarboxylic acid
                     cycle intermediates toward gluconeogenesis. It catalyzes
                     the reversible decarboxylation and...; cd00819"
                     /db_xref="CDD:238417"
     Site            order(101,250,252,258..259,279,301..307,325..326,348,350,
                     359,420,542,545,548)
                     /site_type="active"
                     /db_xref="CDD:238417"
     Site            order(101,250,252,258..259,348,420)
                     /site_type="other"
                     /note="substrate-binding site [chemical binding]"
                     /db_xref="CDD:238417"
     Site            order(259,279,306,325..326,348)
                     /site_type="metal-binding"
                     /note="metal-binding site [ion binding]"
                     /db_xref="CDD:238417"
     Site            order(302,304,451,531..532,542,545,548)
                     /site_type="other"
                     /note="GTP binding site [chemical binding]"
                     /db_xref="CDD:238417"
     CDS             1..637
                     /gene="PCK2"
                     /coded_by="XM_061157832.1:139..2052"
                     /db_xref="GeneID:133066597"
ORIGIN      
        1 myrpglrlsw hrlspwgwss rcsiqtlrvl sgdlgqlpak vrdfvehsar lcqpegihic
       61 dgteaentat lalleqqgli rklpkynncw lartdpkdva rvesktvivt psqrdtvplp
      121 tggargqlgn wmspaefqqa vderfpgcmq grtmyvlpfs mgpvgsplsr igvqltdsay
      181 vvasmrimtr lgtpvlqalg dgdfvkclhs vgqpltgqge pvsqwpcnpe ktlighvpdq
      241 reiisfgsgy ggnsllgkkc falriasrla rdegwlaehm lilgitnpag kkryvaaafp
      301 sacgktnlam mrpalpgwkv ecvgddiawm rfdsdgrlra inpengffgv apgtsattnp
      361 namatvqsnt iftnvaetsd ggvywegidq plppgvtvts wlgkpwkpgd kepcahpnsr
      421 fcaparqcpi idpaweapeg vpidaiifgg rrpkgvplvy eafnwrhgvf vgsamrseat
      481 aaaehkgkvi mhdpfamrpf fgynfgryle hwlsmegrkg vqlprifhvn wfrrdeagrf
      541 lwpgfgenar vldwicrrld gedsaretpi glvpkegald lsslgaidtt qlfslpkdfw
      601 qqevhdirsy lteqvnqdlp kevlaeleal egrvrrm
//
LOCUS       XP_061013816             546 aa            linear   MAM 02-DEC-2023
DEFINITION  DDB1- and CUL4-associated factor 11 isoform X1 [Dama dama].
ACCESSION   XP_061013816
VERSION     XP_061013816.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157833.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..546
                     /product="DDB1- and CUL4-associated factor 11 isoform X1"
                     /calculated_mol_wt=61452
     Region          <180..511
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          180..211
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          221..263
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          269..305
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          310..352
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          359..394
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          440..480
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          486..510
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..546
                     /gene="DCAF11"
                     /coded_by="XM_061157833.1:377..2017"
                     /db_xref="GeneID:133066598"
ORIGIN      
        1 mgsrnsssag tgsgdpsegl prrgaglrrs eeeeeededv dlaqvlayll rrgqvrlvqg
       61 ggaanlqliq alsdseeehd sawdgrlgdr ynppvdatpd trelecseik tqvelatgrl
      121 glrraarels fpqmlhqrer glchqgsfsl gersrvmshf lpndlgftdt ysqkafcgiy
      181 skdgqifmsa cqdqtirlyd crygrfrkfk sikardvgws vldvaftpdg nhflysswsd
      241 yihicniyge gdthtaldlr pderrfavfs iavssdgrev lggandgcly vfdreqnrrt
      301 lqiesheddv navafadvss qilfsggdda ickvwdrrtm reddpkpvga laghqdgitf
      361 idskgdaryl isnskdqtik lwdirrfssr egmeasrqaa tqqnwdyrwq qvpkkawrkl
      421 klpgdsslmt yrghgvlhtl ircrfspths tgqqfiysgc stgkvvvydl lsghivkklt
      481 shkacvrdvs whpfeekivs sswdgnlrlw qyrqaeyfqd dmpeseehps tpapvsrpst
      541 afsspq
//
LOCUS       XP_061013817             546 aa            linear   MAM 02-DEC-2023
DEFINITION  DDB1- and CUL4-associated factor 11 isoform X1 [Dama dama].
ACCESSION   XP_061013817
VERSION     XP_061013817.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157834.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..546
                     /product="DDB1- and CUL4-associated factor 11 isoform X1"
                     /calculated_mol_wt=61452
     Region          <180..511
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          180..211
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          221..263
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          269..305
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          310..352
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          359..394
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          440..480
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          486..510
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..546
                     /gene="DCAF11"
                     /coded_by="XM_061157834.1:406..2046"
                     /db_xref="GeneID:133066598"
ORIGIN      
        1 mgsrnsssag tgsgdpsegl prrgaglrrs eeeeeededv dlaqvlayll rrgqvrlvqg
       61 ggaanlqliq alsdseeehd sawdgrlgdr ynppvdatpd trelecseik tqvelatgrl
      121 glrraarels fpqmlhqrer glchqgsfsl gersrvmshf lpndlgftdt ysqkafcgiy
      181 skdgqifmsa cqdqtirlyd crygrfrkfk sikardvgws vldvaftpdg nhflysswsd
      241 yihicniyge gdthtaldlr pderrfavfs iavssdgrev lggandgcly vfdreqnrrt
      301 lqiesheddv navafadvss qilfsggdda ickvwdrrtm reddpkpvga laghqdgitf
      361 idskgdaryl isnskdqtik lwdirrfssr egmeasrqaa tqqnwdyrwq qvpkkawrkl
      421 klpgdsslmt yrghgvlhtl ircrfspths tgqqfiysgc stgkvvvydl lsghivkklt
      481 shkacvrdvs whpfeekivs sswdgnlrlw qyrqaeyfqd dmpeseehps tpapvsrpst
      541 afsspq
//
LOCUS       XP_061013818             546 aa            linear   MAM 02-DEC-2023
DEFINITION  DDB1- and CUL4-associated factor 11 isoform X1 [Dama dama].
ACCESSION   XP_061013818
VERSION     XP_061013818.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157835.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..546
                     /product="DDB1- and CUL4-associated factor 11 isoform X1"
                     /calculated_mol_wt=61452
     Region          <180..511
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          180..211
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          221..263
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          269..305
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          310..352
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          359..394
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          440..480
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          486..510
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..546
                     /gene="DCAF11"
                     /coded_by="XM_061157835.1:351..1991"
                     /db_xref="GeneID:133066598"
ORIGIN      
        1 mgsrnsssag tgsgdpsegl prrgaglrrs eeeeeededv dlaqvlayll rrgqvrlvqg
       61 ggaanlqliq alsdseeehd sawdgrlgdr ynppvdatpd trelecseik tqvelatgrl
      121 glrraarels fpqmlhqrer glchqgsfsl gersrvmshf lpndlgftdt ysqkafcgiy
      181 skdgqifmsa cqdqtirlyd crygrfrkfk sikardvgws vldvaftpdg nhflysswsd
      241 yihicniyge gdthtaldlr pderrfavfs iavssdgrev lggandgcly vfdreqnrrt
      301 lqiesheddv navafadvss qilfsggdda ickvwdrrtm reddpkpvga laghqdgitf
      361 idskgdaryl isnskdqtik lwdirrfssr egmeasrqaa tqqnwdyrwq qvpkkawrkl
      421 klpgdsslmt yrghgvlhtl ircrfspths tgqqfiysgc stgkvvvydl lsghivkklt
      481 shkacvrdvs whpfeekivs sswdgnlrlw qyrqaeyfqd dmpeseehps tpapvsrpst
      541 afsspq
//
LOCUS       XP_061013819             546 aa            linear   MAM 02-DEC-2023
DEFINITION  DDB1- and CUL4-associated factor 11 isoform X1 [Dama dama].
ACCESSION   XP_061013819
VERSION     XP_061013819.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157836.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..546
                     /product="DDB1- and CUL4-associated factor 11 isoform X1"
                     /calculated_mol_wt=61452
     Region          <180..511
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          180..211
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          221..263
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          269..305
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          310..352
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          359..394
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          440..480
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          486..510
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..546
                     /gene="DCAF11"
                     /coded_by="XM_061157836.1:401..2041"
                     /db_xref="GeneID:133066598"
ORIGIN      
        1 mgsrnsssag tgsgdpsegl prrgaglrrs eeeeeededv dlaqvlayll rrgqvrlvqg
       61 ggaanlqliq alsdseeehd sawdgrlgdr ynppvdatpd trelecseik tqvelatgrl
      121 glrraarels fpqmlhqrer glchqgsfsl gersrvmshf lpndlgftdt ysqkafcgiy
      181 skdgqifmsa cqdqtirlyd crygrfrkfk sikardvgws vldvaftpdg nhflysswsd
      241 yihicniyge gdthtaldlr pderrfavfs iavssdgrev lggandgcly vfdreqnrrt
      301 lqiesheddv navafadvss qilfsggdda ickvwdrrtm reddpkpvga laghqdgitf
      361 idskgdaryl isnskdqtik lwdirrfssr egmeasrqaa tqqnwdyrwq qvpkkawrkl
      421 klpgdsslmt yrghgvlhtl ircrfspths tgqqfiysgc stgkvvvydl lsghivkklt
      481 shkacvrdvs whpfeekivs sswdgnlrlw qyrqaeyfqd dmpeseehps tpapvsrpst
      541 afsspq
//
LOCUS       XP_061013820             502 aa            linear   MAM 02-DEC-2023
DEFINITION  DDB1- and CUL4-associated factor 11 isoform X2 [Dama dama].
ACCESSION   XP_061013820
VERSION     XP_061013820.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157837.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..502
                     /product="DDB1- and CUL4-associated factor 11 isoform X2"
                     /calculated_mol_wt=56992
     Region          <136..467
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          136..167
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          177..219
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          225..261
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          266..308
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          315..350
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          396..436
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          442..466
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..502
                     /gene="DCAF11"
                     /coded_by="XM_061157837.1:134..1642"
                     /db_xref="GeneID:133066598"
ORIGIN      
        1 mkmwiwprgq vrlvqgggaa nlqliqalsd seeehdsawd grlgdrynpp vdatpdtrel
       61 ecseiktqve latgrlglrr aarelsfpqm lhqrerglch qgsfslgers rvmshflpnd
      121 lgftdtysqk afcgiyskdg qifmsacqdq tirlydcryg rfrkfksika rdvgwsvldv
      181 aftpdgnhfl ysswsdyihi cniygegdth taldlrpder rfavfsiavs sdgrevlgga
      241 ndgclyvfdr eqnrrtlqie sheddvnava fadvssqilf sggddaickv wdrrtmredd
      301 pkpvgalagh qdgitfidsk gdarylisns kdqtiklwdi rrfssregme asrqaatqqn
      361 wdyrwqqvpk kawrklklpg dsslmtyrgh gvlhtlircr fspthstgqq fiysgcstgk
      421 vvvydllsgh ivkkltshka cvrdvswhpf eekivssswd gnlrlwqyrq aeyfqddmpe
      481 seehpstpap vsrpstafss pq
//
LOCUS       XP_061013822             292 aa            linear   MAM 02-DEC-2023
DEFINITION  fat storage-inducing transmembrane protein 1 [Dama dama].
ACCESSION   XP_061013822
VERSION     XP_061013822.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157839.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..292
                     /product="fat storage-inducing transmembrane protein 1"
                     /calculated_mol_wt=32096
     Region          80..264
                     /region_name="Scs3p"
                     /note="Inositol phospholipid synthesis and
                     fat-storage-inducing TM; pfam10261"
                     /db_xref="CDD:402051"
     CDS             1..292
                     /gene="FITM1"
                     /coded_by="XM_061157839.1:2386..3264"
                     /db_xref="GeneID:133066600"
ORIGIN      
        1 mergpvvgag rgagariral lgglvrvllw vasallyfgs eqaarllgsp clrrlyhawl
       61 aavvifgpll qfhvnprtif ashgnffnik fvnsawgwtc tflggfvllv vflatrrvav
      121 tarhlsrlvv gaavwrgagr aflliedltg scfeplpqgl llhelpdrrs claaghqwrg
      181 ytvsshtfll tfccllmaee aavfakylah glpagaplrl vfllnvlllg lwnflllctv
      241 iyfhqythkv vgaavgtfaw yltygswyhq pwspgspghg lfprphsshk hn
//
LOCUS       XP_061013823             262 aa            linear   MAM 02-DEC-2023
DEFINITION  neural retina-specific leucine zipper protein [Dama dama].
ACCESSION   XP_061013823
VERSION     XP_061013823.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157840.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..262
                     /product="neural retina-specific leucine zipper protein"
                     /calculated_mol_wt=28418
     Region          67..101
                     /region_name="Maf_N"
                     /note="Maf N-terminal region; pfam08383"
                     /db_xref="CDD:462456"
     Region          154..223
                     /region_name="bZIP_Maf_large"
                     /note="Basic leucine zipper (bZIP) domain of large
                     musculoaponeurotic fibrosarcoma (Maf) proteins: a
                     DNA-binding and dimerization domain; cd14718"
                     /db_xref="CDD:269866"
     Region          154..223
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269866"
     Site            order(161,164..166,168..170,172..174,176..177,179..180)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269866"
     Site            order(180,187,190..191,194..195,197..198,201..202,
                     204..205,208,211..212,215..216,218..219)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269866"
     CDS             1..262
                     /gene="NRL"
                     /coded_by="XM_061157840.1:521..1309"
                     /db_xref="GeneID:133066601"
ORIGIN      
        1 malppsplam eyvndfdlmk fevkrepseg rsgpptaslg stpyssvpps ptfsepgmvg
       61 ptegtrpgle elywlatlqq qlgagealgl speeavellq gqspvpvegp hayypgspee
      121 tgaqhaqlae rfsdaalvsm svrelnrqlr gcgrdealrl kqrrrtlknr gyaqacrskr
      181 lqqrrgleae rarlatqlda lraevarlar erdlykarce llapsglgpe atptsssepl
      241 atewwsrwvg gahhpgggca ih
//
LOCUS       XP_061013824             262 aa            linear   MAM 02-DEC-2023
DEFINITION  neural retina-specific leucine zipper protein [Dama dama].
ACCESSION   XP_061013824
VERSION     XP_061013824.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157841.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..262
                     /product="neural retina-specific leucine zipper protein"
                     /calculated_mol_wt=28418
     Region          67..101
                     /region_name="Maf_N"
                     /note="Maf N-terminal region; pfam08383"
                     /db_xref="CDD:462456"
     Region          154..223
                     /region_name="bZIP_Maf_large"
                     /note="Basic leucine zipper (bZIP) domain of large
                     musculoaponeurotic fibrosarcoma (Maf) proteins: a
                     DNA-binding and dimerization domain; cd14718"
                     /db_xref="CDD:269866"
     Region          154..223
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269866"
     Site            order(161,164..166,168..170,172..174,176..177,179..180)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269866"
     Site            order(180,187,190..191,194..195,197..198,201..202,
                     204..205,208,211..212,215..216,218..219)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269866"
     CDS             1..262
                     /gene="NRL"
                     /coded_by="XM_061157841.1:585..1373"
                     /db_xref="GeneID:133066601"
ORIGIN      
        1 malppsplam eyvndfdlmk fevkrepseg rsgpptaslg stpyssvpps ptfsepgmvg
       61 ptegtrpgle elywlatlqq qlgagealgl speeavellq gqspvpvegp hayypgspee
      121 tgaqhaqlae rfsdaalvsm svrelnrqlr gcgrdealrl kqrrrtlknr gyaqacrskr
      181 lqqrrgleae rarlatqlda lraevarlar erdlykarce llapsglgpe atptsssepl
      241 atewwsrwvg gahhpgggca ih
//
LOCUS       XP_061013825             262 aa            linear   MAM 02-DEC-2023
DEFINITION  neural retina-specific leucine zipper protein [Dama dama].
ACCESSION   XP_061013825
VERSION     XP_061013825.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157842.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..262
                     /product="neural retina-specific leucine zipper protein"
                     /calculated_mol_wt=28418
     Region          67..101
                     /region_name="Maf_N"
                     /note="Maf N-terminal region; pfam08383"
                     /db_xref="CDD:462456"
     Region          154..223
                     /region_name="bZIP_Maf_large"
                     /note="Basic leucine zipper (bZIP) domain of large
                     musculoaponeurotic fibrosarcoma (Maf) proteins: a
                     DNA-binding and dimerization domain; cd14718"
                     /db_xref="CDD:269866"
     Region          154..223
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269866"
     Site            order(161,164..166,168..170,172..174,176..177,179..180)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269866"
     Site            order(180,187,190..191,194..195,197..198,201..202,
                     204..205,208,211..212,215..216,218..219)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269866"
     CDS             1..262
                     /gene="NRL"
                     /coded_by="XM_061157842.1:628..1416"
                     /db_xref="GeneID:133066601"
ORIGIN      
        1 malppsplam eyvndfdlmk fevkrepseg rsgpptaslg stpyssvpps ptfsepgmvg
       61 ptegtrpgle elywlatlqq qlgagealgl speeavellq gqspvpvegp hayypgspee
      121 tgaqhaqlae rfsdaalvsm svrelnrqlr gcgrdealrl kqrrrtlknr gyaqacrskr
      181 lqqrrgleae rarlatqlda lraevarlar erdlykarce llapsglgpe atptsssepl
      241 atewwsrwvg gahhpgggca ih
//
LOCUS       XP_061013826             249 aa            linear   MAM 02-DEC-2023
DEFINITION  proteasome activator complex subunit 1 [Dama dama].
ACCESSION   XP_061013826
VERSION     XP_061013826.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157843.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..249
                     /product="proteasome activator complex subunit 1"
                     /calculated_mol_wt=28518
     Region          8..68
                     /region_name="PA28_alpha"
                     /note="Proteasome activator pa28 alpha subunit; pfam02251"
                     /db_xref="CDD:460507"
     Region          103..247
                     /region_name="PA28_beta"
                     /note="Proteasome activator pa28 beta subunit; pfam02252"
                     /db_xref="CDD:460508"
     CDS             1..249
                     /gene="PSME1"
                     /coded_by="XM_061157843.1:296..1045"
                     /db_xref="GeneID:133066603"
ORIGIN      
        1 matlrvlpea qakvdvfred lctktenllg syfpkkisel daflkepaln eanlsnlkap
       61 ldipvpdpvk ekekeerrkq qekedkdekk kgededkgpp cgpvscneki vvllqrvkpe
      121 ikdvieklnl vttwlqlqip riedgnnfgv avqekvfelm talhtklegf htqiskyfse
      181 rgdavtkaak qphvgdyrql vheldeaeyr dirlmvmeir nayavlydii lknfeklkkp
      241 rgetkgmiy
//
LOCUS       XP_061013827             206 aa            linear   MAM 02-DEC-2023
DEFINITION  ER membrane protein complex subunit 9 isoform X1 [Dama dama].
ACCESSION   XP_061013827
VERSION     XP_061013827.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157844.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..206
                     /product="ER membrane protein complex subunit 9 isoform
                     X1"
                     /calculated_mol_wt=22672
     Region          4..191
                     /region_name="UPF0172"
                     /note="Uncharacterized protein family (UPF0172);
                     pfam03665"
                     /db_xref="CDD:461011"
     CDS             1..206
                     /gene="EMC9"
                     /coded_by="XM_061157844.1:623..1243"
                     /db_xref="GeneID:133066604"
ORIGIN      
        1 mgeveisara yvkmslhaar yphaavngll lapaprsgec lcltdcvplf hshlalsvml
       61 evalnqvdvw gaqaglvvag yyhanaaldd qspgplalki agriaeffpd avlimldnqk
      121 lvpqphvppv ivlenhglrw vpkdknlvmw rdweesrqmv gallegrahq hlvdfdchld
      181 diredwtnqq lnaqitqwvg ptngnt
//
LOCUS       XP_061013828             182 aa            linear   MAM 02-DEC-2023
DEFINITION  ER membrane protein complex subunit 9 isoform X2 [Dama dama].
ACCESSION   XP_061013828
VERSION     XP_061013828.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157845.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..182
                     /product="ER membrane protein complex subunit 9 isoform
                     X2"
                     /calculated_mol_wt=20872
     Region          <68..164
                     /region_name="MPN"
                     /note="Mpr1p, Pad1p N-terminal (MPN) domains; cl13996"
                     /db_xref="CDD:472685"
     CDS             1..182
                     /gene="EMC9"
                     /coded_by="XM_061157845.1:187..735"
                     /db_xref="GeneID:133066604"
ORIGIN      
        1 mpmqlwttra lkhqavmhea srrpgaprpd tgkghhrihi fetweaqlrw mqsahsmllt
       61 plifplhspg plalkiagri aeffpdavli mldnqklvpq phvppvivle nhglrwvpkd
      121 knlvmwrdwe esrqmvgall egrahqhlvd fdchlddire dwtnqqlnaq itqwvgptng
      181 nt
//
LOCUS       XP_061013829            1116 aa            linear   MAM 02-DEC-2023
DEFINITION  importin-4 [Dama dama].
ACCESSION   XP_061013829
VERSION     XP_061013829.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157846.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1116
                     /product="importin-4"
                     /calculated_mol_wt=121960
     Region          60..126
                     /region_name="IBN_N"
                     /note="Importin-beta N-terminal domain; smart00913"
                     /db_xref="CDD:197981"
     Region          389..417
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          <393..>656
                     /region_name="KAP95"
                     /note="Karyopherin (importin) beta [Intracellular
                     trafficking and secretion]; COG5215"
                     /db_xref="CDD:227540"
     Site            order(406..407,410,413..414,417,448..449,452,455..456,459,
                     492..493,496,499..500,534..535,538,541..542)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          430..460
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          471..500
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          513..543
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          555..587
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     CDS             1..1116
                     /gene="IPO4"
                     /coded_by="XM_061157846.1:139..3489"
                     /db_xref="GeneID:133066605"
ORIGIN      
        1 mggarsnafs agsgfqslhv lslppsrsrs rgsaaamepa gleqilrell lpdterirra
       61 teqlqtalrd paslstlcdl lasagdpqir qfaavltrrr lstrwrrlaa eqresikslv
      121 ltvlqreteh svslslaqls aaifrkegle awpqllqllq hsthsahire remgllllsv
      181 vvtsrpeafr phhrellrll netlgevgsp gllfyslrtl ttmapylgid dvplarmlvp
      241 klivavqtli pideakacea mealdelles evpiisshlt evltfcleva rnvalgdair
      301 vrilccltfl vkvkskallk nrflppllht lfpimaaepp mgqldpedqd veeeeldpgl
      361 vgetpkhfav qvvdmlalhl ppeklcpllm pmleealrsq spyqrkagll vlavlsdgag
      421 dhirqrllpp llqivcksle dpsqvvrnaa lfalgqfsen lqphissysg evmplllayl
      481 ksvppghthh lakacyalen fvenlgpkvq pylpelmecm lqplrtpsss rskelavsal
      541 gaiataaqas mlpyfptive hlreflltnh edlqpvriqs letlgvlvra vgepmrplae
      601 eccqlglglc dqvddpdlrr ctyslfaals glmgeslaph lpqittlmll slrstegivp
      661 qydgsctfll fddessgeee elmeeddeee ddseisgysv gnaffdeked tcaalgeisv
      721 ntsvaflpym etvfeevfkl lecphlnvrk aahealgqfc calhkacqsc psesntaalq
      781 aalarvvpsy lqavhgerer qvvmavleal tvmlrscggl alqppgrlae lcqalkavlq
      841 rktacqdtde eeeeeeedqa eydamlleha geaipalaaa aggdafapff agflplllck
      901 tkqgctvaek sfavgtlaes iqglgaasaq fvsrlfpvll sasreadpev rsnaifglgv
      961 laehggrpaq ehfpkllgll lpllarerhd rvhdnicgal arllmasptr kpepqvlapl
     1021 lhalplkedl eewvtmghlf sflyqsspdq vvdvapellr iyslilaenk ipsdtkaall
     1081 lllkflakqh tdsfhsalgs lpgdkaqelq avlglt
//
LOCUS       XP_061013830            1069 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase RNF31 isoform X1 [Dama dama].
ACCESSION   XP_061013830
VERSION     XP_061013830.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157847.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1069
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1069
                     /product="E3 ubiquitin-protein ligase RNF31 isoform X1"
                     /calculated_mol_wt=119609
     Region          1..65
                     /region_name="PUB_1"
                     /note="PNGase/UBA- or UBX-containing domain; pfam18486"
                     /db_xref="CDD:465785"
     Region          52..153
                     /region_name="PUB_RNF31"
                     /note="PNGase/UBA or UBX (PUB) domain of the RNF31 (or
                     HOIP) protein; cd10464"
                     /db_xref="CDD:198422"
     Site            order(78,81..82,85,93..94,97..99,102,104,108)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:198422"
     Region          217..258
                     /region_name="Bbox1_HOIP"
                     /note="B-box-type 1 zinc finger found in
                     HOIL-1-interacting protein (HOIP) and similar proteins;
                     cd19815"
                     /db_xref="CDD:380873"
     Region          302..321
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          350..374
                     /region_name="ZnF_RBZ"
                     /note="Zinc finger domain; smart00547"
                     /db_xref="CDD:197784"
     Region          352..371
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          411..430
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          480..624
                     /region_name="HOIP-UBA"
                     /note="HOIP UBA domain pair; pfam16678"
                     /db_xref="CDD:465229"
     Region          694..747
                     /region_name="mRING-HC-C4C4_RBR_HOIP"
                     /note="Modified RING finger, HC subclass (C4C4-type),
                     found in HOIL-1-interacting protein (HOIP) and similar
                     proteins; cd16631"
                     /db_xref="CDD:438293"
     Site            order(698,722,725..726,729,734,742..743)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438293"
     Site            731..733
                     /site_type="other"
                     /note="ubiquitin binding site [polypeptide binding]"
                     /db_xref="CDD:438293"
     Site            order(735,737..738)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:438293"
     Region          772..849
                     /region_name="BRcat_RBR_HOIP"
                     /note="BRcat domain found in HOIL-1-interacting protein
                     (HOIP) and similar proteins; cd20337"
                     /db_xref="CDD:438998"
     Site            order(777,779..784,786..787,795..797,799..807,813,
                     815..816,826..827,831..832,836,840,842,844,847..849)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:438998"
     Region          850..934
                     /region_name="Rcat_RBR_HOIP"
                     /note="Rcat domain found in HOIL-1-interacting protein
                     (HOIP) and similar proteins; cd20351"
                     /db_xref="CDD:439012"
     Site            order(851..853,856..857,860..861,873..878,880..882,
                     884..886,888..889,891,893,902,905,916,918..920,923,929,
                     932..933)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:439012"
     Region          938..1029
                     /region_name="E3_UbLigase_RBR"
                     /note="E3 Ubiquitin Ligase RBR C-terminal domain;
                     pfam18091"
                     /db_xref="CDD:436265"
     CDS             1..1069
                     /gene="RNF31"
                     /coded_by="XM_061157847.1:197..3406"
                     /db_xref="GeneID:133066607"
ORIGIN      
        1 mpgeeekraf leareelasa lrrdsgqaft qeqlwpllgt slppearylq ldaarlvrcn
       61 ahgeprnyln tlstalnile kygrnllspq rprywrgvkf nnpvfrstvd avqggrdvlr
      121 lygyteeqpd glsfperqee pdeqqvatvt levlllrtel nlllqnahpk pqaleqllkd
      181 kveddllqls efapllreia pgpltipsaa gstpgpcflc gsapgtlhcs tckqalcltc
      241 drlfhghpdr ahhhrktlhg apqavhpslp asapprpqpa svptlgdssf sppdpasarl
      301 lwpcsacall nepwavlcva cdrprgckgl glviegpqgt ggleselsrg hwacqsctfe
      361 neaaavlcai cerprlaqpp slvvdsldss icpkplqqgd pvlssvqtpv wycihctfcn
      421 sgpgwvcamc nrtsspipvq qtpqphasss eerqepgppr rvsapvtcsc gdleqqrqdk
      481 mreegfqlvi kiregeagga cpeevfsalq ysgtevplqw lrselpyvle mvaelaeqqd
      541 pglgafscqe arkawldrhg nldeaveecv rtrrrkvqel rslgfgpeeg slqalfqhgg
      601 dvaraltelq rqrlepfhqr lwdsgpeptp swdgpdkqsl vrrllavhal pswgraelal
      661 allqetprny elgdvveavr qsqdraflrr llaqecavcg walprnrmqa ltscecticp
      721 dcfrqhftia lkekhitdmv cpacgrpdlt ddtqllsyfs tldiqlresl epdayalfhk
      781 kltegvlmrd pkflwcaqcs fgfiyereqq eatcpqchqt fcvhckrqwe eqhrgrsced
      841 fqnwkrtndp eyqaqglamy lqengidcpk ckfsyalarg gcmhfhctqc rhqfcsgcyn
      901 afyaknkcpd pncrvkkslh ghhprdclfy lrdwsavrlq kllqdnnvmf nteppagara
      961 vpgggcrvme qkevpngfrd eacgketpag yaglcqahyk eylvslinsh sldpatlyet
     1021 eelmtaaery lhmrpqalpg ediptyharl lqklieevpl gqsiprrrk
//
LOCUS       XP_061013831             916 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase RNF31 isoform X2 [Dama dama].
ACCESSION   XP_061013831
VERSION     XP_061013831.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157848.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..916
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..916
                     /product="E3 ubiquitin-protein ligase RNF31 isoform X2"
                     /calculated_mol_wt=102303
     Region          1..65
                     /region_name="PUB_1"
                     /note="PNGase/UBA- or UBX-containing domain; pfam18486"
                     /db_xref="CDD:465785"
     Region          52..153
                     /region_name="PUB_RNF31"
                     /note="PNGase/UBA or UBX (PUB) domain of the RNF31 (or
                     HOIP) protein; cd10464"
                     /db_xref="CDD:198422"
     Site            order(78,81..82,85,93..94,97..99,102,104,108)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:198422"
     Region          217..258
                     /region_name="Bbox1_HOIP"
                     /note="B-box-type 1 zinc finger found in
                     HOIL-1-interacting protein (HOIP) and similar proteins;
                     cd19815"
                     /db_xref="CDD:380873"
     Region          302..321
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          352..371
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          411..430
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          480..624
                     /region_name="HOIP-UBA"
                     /note="HOIP UBA domain pair; pfam16678"
                     /db_xref="CDD:465229"
     Region          694..747
                     /region_name="mRING-HC-C4C4_RBR_HOIP"
                     /note="Modified RING finger, HC subclass (C4C4-type),
                     found in HOIL-1-interacting protein (HOIP) and similar
                     proteins; cd16631"
                     /db_xref="CDD:438293"
     Site            order(698,722,725..726,729,734,742..743)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438293"
     Site            731..733
                     /site_type="other"
                     /note="ubiquitin binding site [polypeptide binding]"
                     /db_xref="CDD:438293"
     Site            order(735,737..738)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:438293"
     Region          772..849
                     /region_name="BRcat_RBR_HOIP"
                     /note="BRcat domain found in HOIL-1-interacting protein
                     (HOIP) and similar proteins; cd20337"
                     /db_xref="CDD:438998"
     Site            order(777,779..784,786..787,795..797,799..807,813,
                     815..816,826..827,831..832,836,840,842,844,847..849)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:438998"
     Region          850..916
                     /region_name="Rcat_RBR_HOIP"
                     /note="Rcat domain found in HOIL-1-interacting protein
                     (HOIP) and similar proteins; cd20351"
                     /db_xref="CDD:439012"
     Site            order(851..853,856..857,860..861,873..878,880..882,
                     884..886,888..889,891,893,902,905,911..912,915)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:439012"
     CDS             1..916
                     /gene="RNF31"
                     /coded_by="XM_061157848.1:197..2947"
                     /db_xref="GeneID:133066607"
ORIGIN      
        1 mpgeeekraf leareelasa lrrdsgqaft qeqlwpllgt slppearylq ldaarlvrcn
       61 ahgeprnyln tlstalnile kygrnllspq rprywrgvkf nnpvfrstvd avqggrdvlr
      121 lygyteeqpd glsfperqee pdeqqvatvt levlllrtel nlllqnahpk pqaleqllkd
      181 kveddllqls efapllreia pgpltipsaa gstpgpcflc gsapgtlhcs tckqalcltc
      241 drlfhghpdr ahhhrktlhg apqavhpslp asapprpqpa svptlgdssf sppdpasarl
      301 lwpcsacall nepwavlcva cdrprgckgl glviegpqgt ggleselsrg hwacqsctfe
      361 neaaavlcai cerprlaqpp slvvdsldss icpkplqqgd pvlssvqtpv wycihctfcn
      421 sgpgwvcamc nrtsspipvq qtpqphasss eerqepgppr rvsapvtcsc gdleqqrqdk
      481 mreegfqlvi kiregeagga cpeevfsalq ysgtevplqw lrselpyvle mvaelaeqqd
      541 pglgafscqe arkawldrhg nldeaveecv rtrrrkvqel rslgfgpeeg slqalfqhgg
      601 dvaraltelq rqrlepfhqr lwdsgpeptp swdgpdkqsl vrrllavhal pswgraelal
      661 allqetprny elgdvveavr qsqdraflrr llaqecavcg walprnrmqa ltscecticp
      721 dcfrqhftia lkekhitdmv cpacgrpdlt ddtqllsyfs tldiqlresl epdayalfhk
      781 kltegvlmrd pkflwcaqcs fgfiyereqq eatcpqchqt fcvhckrqwe eqhrgrsced
      841 fqnwkrtndp eyqaqglamy lqengidcpk ckfsyalarg gcmhfhctqc rhqfcsgcyn
      901 afyakntlqc lhlphp
//
LOCUS       XP_061013832             606 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane 9 superfamily member 1 isoform X1 [Dama dama].
ACCESSION   XP_061013832
VERSION     XP_061013832.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157849.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..606
                     /product="transmembrane 9 superfamily member 1 isoform X1"
                     /calculated_mol_wt=69039
     Region          58..562
                     /region_name="EMP70"
                     /note="Endomembrane protein 70; pfam02990"
                     /db_xref="CDD:460774"
     CDS             1..606
                     /gene="TM9SF1"
                     /coded_by="XM_061157849.1:175..1995"
                     /db_xref="GeneID:133066608"
ORIGIN      
        1 mpvlrhprsw scrwgpllll llltgrepgv egathykagd pvilyvnkvg pyhnpqetyh
       61 yyqlpvccpe kirhkslslg evldgdrmae slyeirfren vekrvlchmq lssaqveqlr
      121 qaieelyyfe fvvddlpirg fvgymeesgf lphshkiglw thldfhlefh gdriifanvs
      181 vrdvkphsld glrpdeflgl thtysvrwse tsverrsdrr rgddggffpr tleihwlsii
      241 nsmvlvfllv gfvavilmrv lrndlarynl deettsagsg ddfdqsdngw kiihtdvfrf
      301 ppyrgllcav lgvgaqflal gtgiivmall gmfnvhrhga insaaillya ltccisgyvs
      361 shfyrqigge rwvwniiltt slfsvpfflt wsvvnsvhwa ngstqalpat tilllltvwl
      421 lvgfpltvig gifgknnash fdapcrtkni areippqpwy kstlvhmtvg gflpfsaisv
      481 elyyifatvw greqytlygi lffvfaills vgacisialt yfqlsgedyr wwwrsvlsvg
      541 stglfiflys vfyyarrsnm sgtvqtveff gyslltgyvf flmlgtisff sslkfiryiy
      601 vnlkmd
//
LOCUS       XP_061013834             606 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane 9 superfamily member 1 isoform X1 [Dama dama].
ACCESSION   XP_061013834
VERSION     XP_061013834.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157851.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..606
                     /product="transmembrane 9 superfamily member 1 isoform X1"
                     /calculated_mol_wt=69039
     Region          58..562
                     /region_name="EMP70"
                     /note="Endomembrane protein 70; pfam02990"
                     /db_xref="CDD:460774"
     CDS             1..606
                     /gene="TM9SF1"
                     /coded_by="XM_061157851.1:171..1991"
                     /db_xref="GeneID:133066608"
ORIGIN      
        1 mpvlrhprsw scrwgpllll llltgrepgv egathykagd pvilyvnkvg pyhnpqetyh
       61 yyqlpvccpe kirhkslslg evldgdrmae slyeirfren vekrvlchmq lssaqveqlr
      121 qaieelyyfe fvvddlpirg fvgymeesgf lphshkiglw thldfhlefh gdriifanvs
      181 vrdvkphsld glrpdeflgl thtysvrwse tsverrsdrr rgddggffpr tleihwlsii
      241 nsmvlvfllv gfvavilmrv lrndlarynl deettsagsg ddfdqsdngw kiihtdvfrf
      301 ppyrgllcav lgvgaqflal gtgiivmall gmfnvhrhga insaaillya ltccisgyvs
      361 shfyrqigge rwvwniiltt slfsvpfflt wsvvnsvhwa ngstqalpat tilllltvwl
      421 lvgfpltvig gifgknnash fdapcrtkni areippqpwy kstlvhmtvg gflpfsaisv
      481 elyyifatvw greqytlygi lffvfaills vgacisialt yfqlsgedyr wwwrsvlsvg
      541 stglfiflys vfyyarrsnm sgtvqtveff gyslltgyvf flmlgtisff sslkfiryiy
      601 vnlkmd
//
LOCUS       XP_061013835             606 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane 9 superfamily member 1 isoform X1 [Dama dama].
ACCESSION   XP_061013835
VERSION     XP_061013835.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157852.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..606
                     /product="transmembrane 9 superfamily member 1 isoform X1"
                     /calculated_mol_wt=69039
     Region          58..562
                     /region_name="EMP70"
                     /note="Endomembrane protein 70; pfam02990"
                     /db_xref="CDD:460774"
     CDS             1..606
                     /gene="TM9SF1"
                     /coded_by="XM_061157852.1:156..1976"
                     /db_xref="GeneID:133066608"
ORIGIN      
        1 mpvlrhprsw scrwgpllll llltgrepgv egathykagd pvilyvnkvg pyhnpqetyh
       61 yyqlpvccpe kirhkslslg evldgdrmae slyeirfren vekrvlchmq lssaqveqlr
      121 qaieelyyfe fvvddlpirg fvgymeesgf lphshkiglw thldfhlefh gdriifanvs
      181 vrdvkphsld glrpdeflgl thtysvrwse tsverrsdrr rgddggffpr tleihwlsii
      241 nsmvlvfllv gfvavilmrv lrndlarynl deettsagsg ddfdqsdngw kiihtdvfrf
      301 ppyrgllcav lgvgaqflal gtgiivmall gmfnvhrhga insaaillya ltccisgyvs
      361 shfyrqigge rwvwniiltt slfsvpfflt wsvvnsvhwa ngstqalpat tilllltvwl
      421 lvgfpltvig gifgknnash fdapcrtkni areippqpwy kstlvhmtvg gflpfsaisv
      481 elyyifatvw greqytlygi lffvfaills vgacisialt yfqlsgedyr wwwrsvlsvg
      541 stglfiflys vfyyarrsnm sgtvqtveff gyslltgyvf flmlgtisff sslkfiryiy
      601 vnlkmd
//
LOCUS       XP_061013836             489 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane 9 superfamily member 1 isoform X2 [Dama dama].
ACCESSION   XP_061013836
VERSION     XP_061013836.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157853.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..489
                     /product="transmembrane 9 superfamily member 1 isoform X2"
                     /calculated_mol_wt=55373
     Region          58..475
                     /region_name="EMP70"
                     /note="Endomembrane protein 70; pfam02990"
                     /db_xref="CDD:460774"
     CDS             1..489
                     /gene="TM9SF1"
                     /coded_by="XM_061157853.1:176..1645"
                     /db_xref="GeneID:133066608"
ORIGIN      
        1 mpvlrhprsw scrwgpllll llltgrepgv egathykagd pvilyvnkvg pyhnpqetyh
       61 yyqlpvccpe kirhkslslg evldgdrmae slyeirfren vekrvlchmq lssaqveqlr
      121 qaieelyyfe fvvddlpirg fvgymeesgf lphshkiglw thldfhlefh gdriifanvs
      181 vrdvkphsld glrpdeflgl thtysvrwse tsverrsdrr rgddggffpr tleihwlsii
      241 nsmvlvfllv gfvavilmrv lrndlarynl deettsagsg ddfdqsdngw kiihtdvfrf
      301 ppyrgllcav lgvgaqflal gtgiivmall gmfnvhrhga insaaillya ltccisgyvs
      361 shfyrqigge rwvwniiltt slfsvpfflt wsvvnsvhwa ngstqalpat tilllltvwl
      421 lvgfpltvig gifgknnash fdapcrtkni areippqpwy kstlvhmtvg gflpfryppf
      481 ilwpslsgs
//
LOCUS       XP_061013837             580 aa            linear   MAM 02-DEC-2023
DEFINITION  meiotic recombination protein REC8 homolog [Dama dama].
ACCESSION   XP_061013837
VERSION     XP_061013837.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157854.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..580
                     /product="meiotic recombination protein REC8 homolog"
                     /calculated_mol_wt=66299
     Region          1..110
                     /region_name="Rad21_Rec8_N"
                     /note="N terminus of Rad21 / Rec8 like protein; pfam04825"
                     /db_xref="CDD:461446"
     Region          <130..311
                     /region_name="PspC_subgroup_2"
                     /note="pneumococcal surface protein PspC, LPXTG-anchored
                     form; NF033839"
                     /db_xref="CDD:468202"
     Region          334..401
                     /region_name="Rad21_Rec8_M_Rec8"
                     /note="Middle HEAT-repeat binding domain found in Homo
                     sapiens meiotic recombination protein REC8 homolog and
                     similar proteins; cd21794"
                     /db_xref="CDD:439296"
     Site            order(334,337..344,347,350..351,356..363,373,376..381,
                     393..394,396..401)
                     /site_type="other"
                     /note="putative HEAT-repeat binding site [polypeptide
                     binding]"
                     /db_xref="CDD:439296"
     Region          523..577
                     /region_name="Rad21_Rec8"
                     /note="Conserved region of Rad21 / Rec8 like protein;
                     pfam04824"
                     /db_xref="CDD:335912"
     CDS             1..580
                     /gene="REC8"
                     /coded_by="XM_061157854.1:577..2319"
                     /db_xref="GeneID:133066609"
ORIGIN      
        1 mfyypnvlqr htgcfatiwl aatrgtrlvk reylkvnvvk tceeilnyvl vrvepplpga
       61 prprlslyls aqlqigvirv ysqqcqylve diqhilerlh raqlqiridm vetelpslll
      121 pdhlarmetl edapdpffgm msvdpmlpdp fdipqvrhll eavtpekvpe eippevpaep
      181 pkperirvtp eaitikeaep irmlrieger elpevsrrdl elliaeedea illeerrlef
      241 keepwapeae itvpppspaa lvgveeaaep lpsrvlapee lklvgwepev plpevtpppe
      301 lrlppvpvsp elrrppvapp prgpparrrr rqllfwdeet qisrkefqeq mqtrahcrec
      361 pmvqppermi rspaelfrnp tysgwlpsel lafwthcaqp ppralrrrlp eeleeaerea
      421 aaeeerrkae tpsdievlre alepsgplmv sseisleaae eeksrislvp peerwpwvea
      481 eqpeapalpv vpelpevpve lppepellsp eavhravare lqanrepdfn slvpplsprr
      541 maarvfylll vlaaqeilrv kqeepygrll iqpgprfhds
//
LOCUS       XP_061013838             466 aa            linear   MAM 02-DEC-2023
DEFINITION  interferon regulatory factor 9 isoform X1 [Dama dama].
ACCESSION   XP_061013838
VERSION     XP_061013838.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157855.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..466
                     /product="interferon regulatory factor 9 isoform X1"
                     /calculated_mol_wt=50940
     Region          46..150
                     /region_name="IRF"
                     /note="Interferon regulatory factor transcription factor;
                     pfam00605"
                     /db_xref="CDD:459863"
     Site            order(79,118,120..121,124)
                     /site_type="other"
                     /note="DNA sequence recognition sites [nucleotide
                     binding]"
                     /db_xref="CDD:238051"
     Site            order(123..124,126,129)
                     /site_type="metal-binding"
                     /db_xref="CDD:238051"
     Region          258..421
                     /region_name="IRF-3"
                     /note="Interferon-regulatory factor 3; pfam10401"
                     /db_xref="CDD:463076"
     CDS             1..466
                     /gene="IRF9"
                     /coded_by="XM_061157855.1:280..1680"
                     /db_xref="GeneID:133066610"
ORIGIN      
        1 mgspgalars qpqgpgphss qsvsssdtsv aliprmasgr trctrklrnw vveqvesgqf
       61 pgvcwedaak tmfripwkha gkqdfredqd aaffkawaiy kgkyregsse gpaiwktrlr
      121 calnkscefe evpeighrdg aepykvyrll ppgtvpaqsg tqklpskrph ssassenkee
      181 eitakncils psslqeppqn emvetnggag rvdfgssgss gssssssspe pqegrdtaea
      241 lfqgellsle llpppdsdys llltfiyngr vvgeaqvqsl dcrllaepss sqcsmeqvif
      301 pkpgprepaq rllsqlqrgv llasnsrglf vqrlcpipis wnapqmppgp gphllpsnec
      361 velfrtsyfc rdlaryfqgl gpppkfqvtl nfweenpdps htsqsliavq meqafarrml
      421 ketpeeqaat lsllqslqdp lppllsippv ffetasasll stclpq
//
LOCUS       XP_061013839             431 aa            linear   MAM 02-DEC-2023
DEFINITION  interferon regulatory factor 9 isoform X2 [Dama dama].
ACCESSION   XP_061013839
VERSION     XP_061013839.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157856.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..431
                     /product="interferon regulatory factor 9 isoform X2"
                     /calculated_mol_wt=47510
     Region          11..115
                     /region_name="IRF"
                     /note="Interferon regulatory factor transcription factor;
                     pfam00605"
                     /db_xref="CDD:459863"
     Site            order(44,83,85..86,89)
                     /site_type="other"
                     /note="DNA sequence recognition sites [nucleotide
                     binding]"
                     /db_xref="CDD:238051"
     Site            order(88..89,91,94)
                     /site_type="metal-binding"
                     /db_xref="CDD:238051"
     Region          223..386
                     /region_name="IRF-3"
                     /note="Interferon-regulatory factor 3; pfam10401"
                     /db_xref="CDD:463076"
     CDS             1..431
                     /gene="IRF9"
                     /coded_by="XM_061157856.1:491..1786"
                     /db_xref="GeneID:133066610"
ORIGIN      
        1 masgrtrctr klrnwvveqv esgqfpgvcw edaaktmfri pwkhagkqdf redqdaaffk
       61 awaiykgkyr egssegpaiw ktrlrcalnk scefeevpei ghrdgaepyk vyrllppgtv
      121 paqsgtqklp skrphssass enkeeeitak ncilspsslq eppqnemvet nggagrvdfg
      181 ssgssgssss ssspepqegr dtaealfqge llslellppp dsdysllltf iyngrvvgea
      241 qvqsldcrll aepsssqcsm eqvifpkpgp repaqrllsq lqrgvllasn srglfvqrlc
      301 pipiswnapq mppgpgphll psnecvelfr tsyfcrdlar yfqglgpppk fqvtlnfwee
      361 npdpshtsqs liavqmeqaf arrmlketpe eqaatlsllq slqdplppll sippvffeta
      421 sasllstclp q
//
LOCUS       XP_061013840             423 aa            linear   MAM 02-DEC-2023
DEFINITION  interferon regulatory factor 9 isoform X3 [Dama dama].
ACCESSION   XP_061013840
VERSION     XP_061013840.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157857.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..423
                     /product="interferon regulatory factor 9 isoform X3"
                     /calculated_mol_wt=46125
     Region          11..115
                     /region_name="IRF"
                     /note="Interferon regulatory factor transcription factor;
                     pfam00605"
                     /db_xref="CDD:459863"
     Site            order(44,83,85..86,89)
                     /site_type="other"
                     /note="DNA sequence recognition sites [nucleotide
                     binding]"
                     /db_xref="CDD:238051"
     Site            order(88..89,91,94)
                     /site_type="metal-binding"
                     /db_xref="CDD:238051"
     Region          223..>337
                     /region_name="IRF-3"
                     /note="Interferon-regulatory factor 3; pfam10401"
                     /db_xref="CDD:463076"
     CDS             1..423
                     /gene="IRF9"
                     /coded_by="XM_061157857.1:491..1762"
                     /db_xref="GeneID:133066610"
ORIGIN      
        1 masgrtrctr klrnwvveqv esgqfpgvcw edaaktmfri pwkhagkqdf redqdaaffk
       61 awaiykgkyr egssegpaiw ktrlrcalnk scefeevpei ghrdgaepyk vyrllppgtv
      121 paqsgtqklp skrphssass enkeeeitak ncilspsslq eppqnemvet nggagrvdfg
      181 ssgssgssss ssspepqegr dtaealfqge llslellppp dsdysllltf iyngrvvgea
      241 qvqsldcrll aepsssqcsm eqvifpkpgp repaqrllsq lqrgvllasn srglfvqrlc
      301 pipiswnapq mppgpgphll psnecvelfr tsyfcranpp aqsrpgpctc vvhipghsps
      361 sppswaktte deaqvepsti iahlrsattw krtvitrrlg qvfpgpgapt qvssdteflg
      421 gep
//
LOCUS       XP_061013841             396 aa            linear   MAM 02-DEC-2023
DEFINITION  interferon regulatory factor 9 isoform X4 [Dama dama].
ACCESSION   XP_061013841
VERSION     XP_061013841.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157858.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..396
                     /product="interferon regulatory factor 9 isoform X4"
                     /calculated_mol_wt=43654
     Region          11..115
                     /region_name="IRF"
                     /note="Interferon regulatory factor transcription factor;
                     pfam00605"
                     /db_xref="CDD:459863"
     Site            order(44,83,85..86,89)
                     /site_type="other"
                     /note="DNA sequence recognition sites [nucleotide
                     binding]"
                     /db_xref="CDD:238051"
     Site            order(88..89,91,94)
                     /site_type="metal-binding"
                     /db_xref="CDD:238051"
     Region          223..351
                     /region_name="IRF-3"
                     /note="Interferon-regulatory factor 3; pfam10401"
                     /db_xref="CDD:463076"
     CDS             1..396
                     /gene="IRF9"
                     /coded_by="XM_061157858.1:491..1681"
                     /db_xref="GeneID:133066610"
ORIGIN      
        1 masgrtrctr klrnwvveqv esgqfpgvcw edaaktmfri pwkhagkqdf redqdaaffk
       61 awaiykgkyr egssegpaiw ktrlrcalnk scefeevpei ghrdgaepyk vyrllppgtv
      121 paqsgtqklp skrphssass enkeeeitak ncilspsslq eppqnemvet nggagrvdfg
      181 ssgssgssss ssspepqegr dtaealfqge llslellppp dsdysllltf iyngrvvgea
      241 qvqsldcrll aepsssqcsm eqrlcpipis wnapqmppgp gphllpsnec velfrtsyfc
      301 rdlaryfqgl gpppkfqvtl nfweenpdps htsqsliavq meqafarrml ketpeeqaat
      361 lsllqslqdp lppllsippv ffetasasll stclpq
//
LOCUS       XP_061013842             388 aa            linear   MAM 02-DEC-2023
DEFINITION  interferon regulatory factor 9 isoform X5 [Dama dama].
ACCESSION   XP_061013842
VERSION     XP_061013842.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157859.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..388
                     /product="interferon regulatory factor 9 isoform X5"
                     /calculated_mol_wt=42270
     Region          11..115
                     /region_name="IRF"
                     /note="Interferon regulatory factor transcription factor;
                     pfam00605"
                     /db_xref="CDD:459863"
     Site            order(44,83,85..86,89)
                     /site_type="other"
                     /note="DNA sequence recognition sites [nucleotide
                     binding]"
                     /db_xref="CDD:238051"
     Site            order(88..89,91,94)
                     /site_type="metal-binding"
                     /db_xref="CDD:238051"
     Region          223..>302
                     /region_name="IRF-3"
                     /note="Interferon-regulatory factor 3; pfam10401"
                     /db_xref="CDD:463076"
     CDS             1..388
                     /gene="IRF9"
                     /coded_by="XM_061157859.1:491..1657"
                     /db_xref="GeneID:133066610"
ORIGIN      
        1 masgrtrctr klrnwvveqv esgqfpgvcw edaaktmfri pwkhagkqdf redqdaaffk
       61 awaiykgkyr egssegpaiw ktrlrcalnk scefeevpei ghrdgaepyk vyrllppgtv
      121 paqsgtqklp skrphssass enkeeeitak ncilspsslq eppqnemvet nggagrvdfg
      181 ssgssgssss ssspepqegr dtaealfqge llslellppp dsdysllltf iyngrvvgea
      241 qvqsldcrll aepsssqcsm eqrlcpipis wnapqmppgp gphllpsnec velfrtsyfc
      301 ranppaqsrp gpctcvvhip ghspssppsw akttedeaqv epstiiahlr sattwkrtvi
      361 trrlgqvfpg pgaptqvssd teflggep
//
LOCUS       XP_061013844             326 aa            linear   MAM 02-DEC-2023
DEFINITION  interferon regulatory factor 9 isoform X6 [Dama dama].
ACCESSION   XP_061013844
VERSION     XP_061013844.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157861.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..326
                     /product="interferon regulatory factor 9 isoform X6"
                     /calculated_mol_wt=35889
     Region          11..>61
                     /region_name="IRF"
                     /note="Interferon Regulatory Factor (IRF); also known as
                     tryptophan pentad repeat. The family of IRF transcription
                     factors is important in the regulation of interferons in
                     response to infection by virus and in the regulation of
                     interferon-inducible genes. The...; cl00096"
                     /db_xref="CDD:469613"
     Region          118..281
                     /region_name="IRF-3"
                     /note="Interferon-regulatory factor 3; pfam10401"
                     /db_xref="CDD:463076"
     CDS             1..326
                     /gene="IRF9"
                     /coded_by="XM_061157861.1:491..1471"
                     /db_xref="GeneID:133066610"
ORIGIN      
        1 masgrtrctr klrnwvveqv esgqfpgvcw edaaktmfri pwkhagkqdf redqdaaffk
       61 emvetnggag rvdfgssgss gssssssspe pqegrdtaea lfqgellsle llpppdsdys
      121 llltfiyngr vvgeaqvqsl dcrllaepss sqcsmeqvif pkpgprepaq rllsqlqrgv
      181 llasnsrglf vqrlcpipis wnapqmppgp gphllpsnec velfrtsyfc rdlaryfqgl
      241 gpppkfqvtl nfweenpdps htsqsliavq meqafarrml ketpeeqaat lsllqslqdp
      301 lppllsippv ffetasasll stclpq
//
LOCUS       XP_061013845             463 aa            linear   MAM 02-DEC-2023
DEFINITION  TERF1-interacting nuclear factor 2 isoform X1 [Dama dama].
ACCESSION   XP_061013845
VERSION     XP_061013845.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157862.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..463
                     /product="TERF1-interacting nuclear factor 2 isoform X1"
                     /calculated_mol_wt=50610
     Region          20..160
                     /region_name="TINF2_N"
                     /note="TERF1-interacting nuclear factor 2 N-terminus;
                     pfam14973"
                     /db_xref="CDD:464415"
     Region          249..354
                     /region_name="TIN2_TBM"
                     /note="TRF-binding motif region of TRF-Interacting Nuclear
                     factor 2; cd11741"
                     /db_xref="CDD:240666"
     CDS             1..463
                     /gene="TINF2"
                     /coded_by="XM_061157862.1:424..1815"
                     /db_xref="GeneID:133066611"
ORIGIN      
        1 matppgagpa alrfvaaasw qvirgrcveh fprvleflry lraaapglvr yrhherlcmg
       61 lkaklvveli lqgrpwaqvl nalhhhfpes gpavrdpkit kqdlrkisea qetfcqqvkq
      121 laegpvdlas klqeleqeyg etflaamekl ffeylcqlek alpllqaqql qdvlswmqpg
      181 vsitssfvls qygvdmgwpl pecsatdavn ttepseqspp qqprpalydp lpkaspgpll
      241 pqgpasrkhp epltghhfnl aplgrrriqs qwaatsrghk erptvmllpf rdvgsaaqvt
      301 skpgkgkdgt hpadpagpag tralltgksr spsrtlggra vkgnpmdssa seqkencnmd
      361 chmeprrlsl spprksvcpp slyssditig dlvldsdeee dsqsegrdpp yvpslpkala
      421 tspgqlqpps ckvrstvkrq ygcpkpsrrs qrpssmltgt qep
//
LOCUS       XP_061013846             451 aa            linear   MAM 02-DEC-2023
DEFINITION  TERF1-interacting nuclear factor 2 isoform X2 [Dama dama].
ACCESSION   XP_061013846
VERSION     XP_061013846.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157863.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..451
                     /product="TERF1-interacting nuclear factor 2 isoform X2"
                     /calculated_mol_wt=49456
     Region          20..160
                     /region_name="TINF2_N"
                     /note="TERF1-interacting nuclear factor 2 N-terminus;
                     pfam14973"
                     /db_xref="CDD:464415"
     Region          249..354
                     /region_name="TIN2_TBM"
                     /note="TRF-binding motif region of TRF-Interacting Nuclear
                     factor 2; cd11741"
                     /db_xref="CDD:240666"
     CDS             1..451
                     /gene="TINF2"
                     /coded_by="XM_061157863.1:391..1746"
                     /db_xref="GeneID:133066611"
ORIGIN      
        1 matppgagpa alrfvaaasw qvirgrcveh fprvleflry lraaapglvr yrhherlcmg
       61 lkaklvveli lqgrpwaqvl nalhhhfpes gpavrdpkit kqdlrkisea qetfcqqvkq
      121 laegpvdlas klqeleqeyg etflaamekl ffeylcqlek alpllqaqql qdvlswmqpg
      181 vsitssfvls qygvdmgwpl pecsatdavn ttepseqspp qqprpalydp lpkaspgpll
      241 pqgpasrkhp epltghhfnl aplgrrriqs qwaatsrghk erptvmllpf rdvgsaaqvt
      301 skpgkgkdgt hpadpagpag tralltgksr spsrtlggra vkgnpmdssa seqkencnmd
      361 chmeprrlsl spprksvcpp slyssditig dlvldsdeee dsqsegrepl enyqktkfdt
      421 liptfceylp ssgpstvsip fpdctdssrl l
//
LOCUS       XP_061013847             405 aa            linear   MAM 02-DEC-2023
DEFINITION  TERF1-interacting nuclear factor 2 isoform X3 [Dama dama].
ACCESSION   XP_061013847
VERSION     XP_061013847.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157864.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..405
                     /product="TERF1-interacting nuclear factor 2 isoform X3"
                     /calculated_mol_wt=44085
     Region          <1..102
                     /region_name="TIN2_N"
                     /note="N-terminal domain of TRF-interacting nuclear factor
                     2; shelterin complex protein of telomeres; cl18929"
                     /db_xref="CDD:473127"
     Region          191..296
                     /region_name="TIN2_TBM"
                     /note="TRF-binding motif region of TRF-Interacting Nuclear
                     factor 2; cd11741"
                     /db_xref="CDD:240666"
     CDS             1..405
                     /gene="TINF2"
                     /coded_by="XM_061157864.1:507..1724"
                     /db_xref="GeneID:133066611"
ORIGIN      
        1 mglkaklvve lilqgrpwaq vlnalhhhfp esgpavrdpk itkqdlrkis eaqetfcqqv
       61 kqlaegpvdl asklqeleqe ygetflaame klffeylcql ekalpllqaq qlqdvlswmq
      121 pgvsitssfv lsqygvdmgw plpecsatda vnttepseqs ppqqprpaly dplpkaspgp
      181 llpqgpasrk hpepltghhf nlaplgrrri qsqwaatsrg hkerptvmll pfrdvgsaaq
      241 vtskpgkgkd gthpadpagp agtralltgk srspsrtlgg ravkgnpmds saseqkencn
      301 mdchmeprrl slspprksvc ppslyssdit igdlvldsde eedsqsegrd ppyvpslpka
      361 latspgqlqp psckvrstvk rqygcpkpsr rsqrpssmlt gtqep
//
LOCUS       XP_061013848             348 aa            linear   MAM 02-DEC-2023
DEFINITION  GMP reductase 2 [Dama dama].
ACCESSION   XP_061013848
VERSION     XP_061013848.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157865.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..348
                     /product="GMP reductase 2"
                     /calculated_mol_wt=37887
     Region          3..345
                     /region_name="PRK05096"
                     /note="guanosine 5'-monophosphate oxidoreductase;
                     Provisional"
                     /db_xref="CDD:235343"
     CDS             1..348
                     /gene="GMPR2"
                     /coded_by="XM_061157865.1:166..1212"
                     /db_xref="GeneID:133066612"
ORIGIN      
        1 mphidndvkl dfkdvllrpk rstlksrsev dltrsfafrn skqmytgipi iaanmdtvgt
       61 femakvlckf slftavhkhy sleqwkefas qnpdclehla assgtgssdf eqleqilnai
      121 pqvkyvcldv angysehfve fvkdvrkrfp ehtimagnvv tgemveelil sgadiikvgi
      181 gpgsvcttrk ktgvgypqls avmecadaah glkghiisdg gcscpgdvak afgagadfvm
      241 lggmlaghte sggelierng rkyklfygms semamkkyag gvaeyraseg ktvevpfkgd
      301 vehtirdilg girstctyvg aaklkelsrr ttfirvtqqv npifsdes
//
LOCUS       XP_061013849             348 aa            linear   MAM 02-DEC-2023
DEFINITION  GMP reductase 2 [Dama dama].
ACCESSION   XP_061013849
VERSION     XP_061013849.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157866.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..348
                     /product="GMP reductase 2"
                     /calculated_mol_wt=37887
     Region          3..345
                     /region_name="PRK05096"
                     /note="guanosine 5'-monophosphate oxidoreductase;
                     Provisional"
                     /db_xref="CDD:235343"
     CDS             1..348
                     /gene="GMPR2"
                     /coded_by="XM_061157866.1:177..1223"
                     /db_xref="GeneID:133066612"
ORIGIN      
        1 mphidndvkl dfkdvllrpk rstlksrsev dltrsfafrn skqmytgipi iaanmdtvgt
       61 femakvlckf slftavhkhy sleqwkefas qnpdclehla assgtgssdf eqleqilnai
      121 pqvkyvcldv angysehfve fvkdvrkrfp ehtimagnvv tgemveelil sgadiikvgi
      181 gpgsvcttrk ktgvgypqls avmecadaah glkghiisdg gcscpgdvak afgagadfvm
      241 lggmlaghte sggelierng rkyklfygms semamkkyag gvaeyraseg ktvevpfkgd
      301 vehtirdilg girstctyvg aaklkelsrr ttfirvtqqv npifsdes
//
LOCUS       XP_061013850             239 aa            linear   MAM 02-DEC-2023
DEFINITION  proteasome activator complex subunit 2 isoform X1 [Dama dama].
ACCESSION   XP_061013850
VERSION     XP_061013850.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157867.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..239
                     /product="proteasome activator complex subunit 2 isoform
                     X1"
                     /calculated_mol_wt=27320
     Region          12..66
                     /region_name="PA28_alpha"
                     /note="Proteasome activator pa28 alpha subunit; pfam02251"
                     /db_xref="CDD:460507"
     Region          93..237
                     /region_name="PA28_beta"
                     /note="Proteasome activator pa28 beta subunit; pfam02252"
                     /db_xref="CDD:460508"
     CDS             1..239
                     /gene="PSME2"
                     /coded_by="XM_061157867.1:100..819"
                     /db_xref="GeneID:133066613"
ORIGIN      
        1 makpcgvrls gearkqvdvf rqnlfqeaee flyrflpqki iylnqllqed sfnvtdlnsl
       61 rapldipipd pppkddemet dkqekkevpk cgflpgneki lallalvkpe vwtlkekcil
      121 vitwiqhlip kiedgndfgv aiqekvlerv navktkveaf qttiskyfse rgdavakask
      181 ethvmdyral vherdeavyg elramvldlr afyaelyhii ssnlekivnp kgeekpsmy
//
LOCUS       XP_061013851             218 aa            linear   MAM 02-DEC-2023
DEFINITION  proteasome activator complex subunit 2 isoform X2 [Dama dama].
ACCESSION   XP_061013851
VERSION     XP_061013851.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157868.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..218
                     /product="proteasome activator complex subunit 2 isoform
                     X2"
                     /calculated_mol_wt=24698
     Region          72..216
                     /region_name="PA28_beta"
                     /note="Proteasome activator pa28 beta subunit; pfam02252"
                     /db_xref="CDD:460508"
     CDS             1..218
                     /gene="PSME2"
                     /coded_by="XM_061157868.1:100..756"
                     /db_xref="GeneID:133066613"
ORIGIN      
        1 makpcgvrls gearkqvdvf rqnlfqeeds fnvtdlnslr apldipipdp ppkddemetd
       61 kqekkevpkc gflpgnekil allalvkpev wtlkekcilv itwiqhlipk iedgndfgva
      121 iqekvlervn avktkveafq ttiskyfser gdavakaske thvmdyralv herdeavyge
      181 lramvldlra fyaelyhiis snlekivnpk geekpsmy
//
LOCUS       XP_061013852             222 aa            linear   MAM 02-DEC-2023
DEFINITION  charged multivesicular body protein 4a [Dama dama].
ACCESSION   XP_061013852
VERSION     XP_061013852.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157869.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..222
                     /product="charged multivesicular body protein 4a"
                     /calculated_mol_wt=24890
     Region          21..157
                     /region_name="Snf7"
                     /note="pfam03357"
                     /db_xref="CDD:460896"
     CDS             1..222
                     /gene="CHMP4A"
                     /coded_by="XM_061157869.1:108..776"
                     /db_xref="GeneID:133066615"
ORIGIN      
        1 msglgrlfgr gkkekaptpe eaiqklkete kilikkqefl eqkieqelqt akkhgtknkr
       61 aalqalrrkk rleqqlaqtd gtlstlefqr eaienattna evlrtmelas qglkkayqdm
      121 didkvdelma diteqqevaq qisdaisrpl gfgddvdede lleeleeleq eelarellhv
      181 gdkeeeppvt lpsvpsthlp aepapkaded eaalkqlaew vs
//
LOCUS       XP_061013853             164 aa            linear   MAM 02-DEC-2023
DEFINITION  magnesium-dependent phosphatase 1 [Dama dama].
ACCESSION   XP_061013853
VERSION     XP_061013853.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157870.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..164
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..164
                     /product="magnesium-dependent phosphatase 1"
                     /calculated_mol_wt=18406
     Region          3..160
                     /region_name="Acid_PPase"
                     /note="Acid Phosphatase; pfam12689"
                     /db_xref="CDD:372256"
     Site            order(11..15,69..70,100,122..123,126..127)
                     /site_type="active"
                     /db_xref="CDD:319804"
     CDS             1..164
                     /gene="MDP1"
                     /coded_by="XM_061157870.1:127..621"
                     /db_xref="GeneID:133066616"
ORIGIN      
        1 marlpklavf dldytlwpfw vdthvdppfh kssdgtvrdr rgqsiqlype vpavlerlrg
       61 lgvpiaaasr tgeveganql lelfdlvryf vhreiypgsk vthferlqqk tgvpfsqmif
      121 fddekrnivd vsklgvtcih vqhgmslqtl tqgldaftka qagl
//
LOCUS       XP_061013855              81 aa            linear   MAM 02-DEC-2023
DEFINITION  NEDD8 [Dama dama].
ACCESSION   XP_061013855
VERSION     XP_061013855.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157872.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..81
                     /product="NEDD8"
                     /calculated_mol_wt=8940
     Region          3..76
                     /region_name="Ubl_NEDD8"
                     /note="ubiquitin-like (Ubl) domain found in neural
                     precursor cell expressed developmentally down-regulated
                     protein 8 (NEDD8) and similar proteins; cd01806"
                     /db_xref="CDD:340504"
     Site            order(6..10,28..29,31..32,34..37,40,42,44,47..49,68,
                     70..76)
                     /site_type="other"
                     /note="E1/E2/E3 interaction site [polypeptide binding]"
                     /db_xref="CDD:340504"
     Site            order(6,8..9,40,42,44..54,59,68,70..76)
                     /site_type="other"
                     /note="NEDP1 interaction site [polypeptide binding]"
                     /db_xref="CDD:340504"
     Site            order(6..11,31..37,39..40,47,68,70..74)
                     /site_type="other"
                     /note="bacterial deamidase effectors interaction site
                     [polypeptide binding]"
                     /db_xref="CDD:340504"
     Site            order(6,11,27,29,48)
                     /site_type="other"
                     /note="key conserved lysines"
                     /db_xref="CDD:340504"
     CDS             1..81
                     /gene="NEDD8"
                     /coded_by="XM_061157872.1:140..385"
                     /db_xref="GeneID:133066617"
ORIGIN      
        1 mlikvktltg keieidiept dkverikerv eekegippqq qrliysgkqm ndektaadyk
       61 ilggsvlhlv lalrgggglr q
//
LOCUS       XP_061013856             338 aa            linear   MAM 02-DEC-2023
DEFINITION  testis-specific serine/threonine-protein kinase 4 [Dama dama].
ACCESSION   XP_061013856
VERSION     XP_061013856.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157873.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..338
                     /product="testis-specific serine/threonine-protein kinase
                     4"
                     /calculated_mol_wt=38234
     Region          22..303
                     /region_name="STKc_TSSK4-like"
                     /note="Catalytic domain of testis-specific
                     serine/threonine kinase 4 and similar proteins; cd14162"
                     /db_xref="CDD:271064"
     Site            order(29..33,37,50,52,84,100..103,107,109..110,112,
                     157..158,160,162..163,165,175..176,179,209..213,215,
                     245..248)
                     /site_type="active"
                     /db_xref="CDD:271064"
     Site            order(29..32,37,50,52,84,100..103,107,162..163,165,
                     175..176)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271064"
     Site            order(107,109..110,112,158,160,162,179,209..213,215,
                     245..248)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271064"
     Site            order(175..186,203..213)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271064"
     CDS             1..338
                     /gene="TSSK4"
                     /coded_by="XM_061157873.1:6788..7804"
                     /db_xref="GeneID:133066618"
ORIGIN      
        1 mgkgdveapp tsayrsvmee ygyevgkvig ngsygtvyea yytkqkvmva vkiiskkkas
       61 edylnkflpr eiqvmkvlrh khlinfyqai ettsrvyiil elaqggdvle wiqrygacse
      121 plagkwfsql tlgiaylhsk givhrplltp slsaagrdlk lenllldkre nvkisdfgfa
      181 kmvpsnqsvr nspsyrqvnc fshlsqtycg sfayacpeil lglpynpfls dtwsmgvily
      241 tlvvarlpfd dtnlkkllke tqkevtfppn yaisqecknl ilqtlrqank ratildiikd
      301 pwvlkfqpeq ptheirllea mcqppsttnr hqsleist
//
LOCUS       XP_061013857             822 aa            linear   MAM 02-DEC-2023
DEFINITION  protein-glutamine gamma-glutamyltransferase K [Dama dama].
ACCESSION   XP_061013857
VERSION     XP_061013857.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157874.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..822
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..822
                     /product="protein-glutamine gamma-glutamyltransferase K"
                     /calculated_mol_wt=90269
     Region          121..233
                     /region_name="Transglut_N"
                     /note="Transglutaminase family; pfam00868"
                     /db_xref="CDD:459971"
     Region          377..468
                     /region_name="TGc"
                     /note="Transglutaminase/protease-like homologues;
                     smart00460"
                     /db_xref="CDD:214673"
     Region          592..689
                     /region_name="Transglut_C"
                     /note="Transglutaminase family, C-terminal ig like domain;
                     pfam00927"
                     /db_xref="CDD:460002"
     Region          697..794
                     /region_name="Transglut_C"
                     /note="Transglutaminase family, C-terminal ig like domain;
                     pfam00927"
                     /db_xref="CDD:460002"
     CDS             1..822
                     /gene="TGM1"
                     /coded_by="XM_061157874.1:842..3310"
                     /db_xref="GeneID:133066619"
ORIGIN      
        1 mpsptpssgg prsdmgrwgg npwqppatps pepepepdrr srrggrsfwa rccgccscrn
       61 tedddwgper rgdrgargsg srsrrpdsrg sdsrrpgsrg savnaagdgt iregmlvvtg
      121 vdllssrsdq nrrehhtdef eydelilrrg qpfhmvlfls rpyessdhvt lelcignnpe
      181 vgkgthliip vgkggsggwk aqvtkssgqn lnlrvhtspn aiigkfqfti rtrceagefq
      241 lpfdprneiy ilfnpwcped ivyvdhedwr qeyvlnesgr iyygteaqig ertwnygqfd
      301 hgvldaclyi ldrrgmpygg rgdpvsvsrv vsamvnsldd ngvlignwsg dysrgtnpsa
      361 wvgsveills ylrtgnsvpf gqcwvfagvt ttvlrclgla trtvtnfnsa hdtdtsltmd
      421 iyfdenmkpl ehlnhdsvwn fhvwndcwmk rpdlpsgfdg wqvvdatpqe tssgifccgp
      481 csvqsikngl vymkydtpfi faevnsdkvy wqrqddgsfk ivyveekaig sliitkaigs
      541 nmredithty khpegseaer kavetaaahg skpnvyttrd saedvavqve aqdavmgqdl
      601 tvcvvltnrg gsprtvklhl ylsvtfytgv tgsvfkeskk evvlapgase rvtmpvayke
      661 yrvhlvdqga mllnvsghvk engqvlakqh tfrlrtpdls ltllgaavvg qecevqivfk
      721 nplpvtltnv vfrlegsglq rpkilnvgdi ggnetvtlrq tfvpvrpgpr qliasldspq
      781 lsqvhgviqv dvapaaggga fsdtrgnsrs getipmasrg ga
//
LOCUS       XP_061013858             567 aa            linear   MAM 02-DEC-2023
DEFINITION  geranylgeranyl transferase type-2 subunit alpha [Dama dama].
ACCESSION   XP_061013858
VERSION     XP_061013858.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157875.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..567
                     /product="geranylgeranyl transferase type-2 subunit alpha"
                     /calculated_mol_wt=64771
     Region          1..>237
                     /region_name="BET4"
                     /note="Protein prenyltransferase, alpha subunit
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG5536"
                     /db_xref="CDD:227823"
     Region          244..346
                     /region_name="RabGGT_insert"
                     /note="Rab geranylgeranyl transferase alpha-subunit,
                     insert domain; pfam07711"
                     /db_xref="CDD:462239"
     Region          443..461
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          <444..547
                     /region_name="PPP1R42"
                     /note="protein phosphatase 1 regulatory subunit 42;
                     cl42388"
                     /db_xref="CDD:455733"
     Region          462..487
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          488..509
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          510..534
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     CDS             1..567
                     /gene="RABGGTA"
                     /coded_by="XM_061157875.1:196..1899"
                     /db_xref="GeneID:133066620"
ORIGIN      
        1 mhgrlkvkts eeqaeakrle reqklklyqa atrtvfqkrq ageldesvle ltsqilganp
       61 dfatlwncrr evlqrlevqk sseelaalvk aelgflescl rvnpksygtw hhrcwllgrl
      121 pepnwarele lcarflevde rnfhcwdyrr fvaaqaavpp aeelaftdsl itrnfsnyss
      181 whyrscllpq lhpqpdcgpq grlpedvllk elelvqnaff tdpndqsawf yhrwllgrad
      241 pqdalrclhv srdeacltvs fsrpllvgsg aetlllmvde splavewrtp egrnrpshvw
      301 lcdlpatsln dqlpqhtfrv iwtagdaqke cvllkgrqeg wcrdsatdeq lfrcelsvek
      361 stvlqseles ckelqelepe nkwclltiil lmraldplqy eketlqyfqt lkavdpmraa
      421 ylddlrskfl lensvlkmey aevrvlhlah kdltvlchle qlllvthldl shnrlrslpp
      481 alaalrclev lqandnaies ldgvtnlprl qelvlcnnrl qqpvvlqpla scprltllnl
      541 qgnplcqaeg ssehlaellp sissilt
//
LOCUS       XP_061013859            1214 aa            linear   MAM 02-DEC-2023
DEFINITION  adenylate cyclase type 4 isoform X1 [Dama dama].
ACCESSION   XP_061013859
VERSION     XP_061013859.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157876.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1214
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1214
                     /product="adenylate cyclase type 4 isoform X1"
                     /calculated_mol_wt=134863
     Region          183..590
                     /region_name="AcyC"
                     /note="Adenylate cyclase, class 3 [Signal transduction
                     mechanisms]; COG2114"
                     /db_xref="CDD:441717"
     Region          401..555
                     /region_name="Guanylate_cyc"
                     /note="Adenylate and Guanylate cyclase catalytic domain;
                     pfam00211"
                     /db_xref="CDD:425528"
     Site            order(413,415..420,455,457..459,462,524..526,530..531,
                     534..535,574)
                     /site_type="active"
                     /note="nucleotidyl binding site [active]"
                     /db_xref="CDD:143636"
     Site            order(415,459)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143636"
     Site            order(420,432,435..436,439,443,455..456,512,515,525..528,
                     531,574)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143636"
     Region          616..721
                     /region_name="Adcy_cons_dom"
                     /note="Adenylate cyclase, conserved domain; pfam06327"
                     /db_xref="CDD:461877"
     Region          1001..1200
                     /region_name="Guanylate_cyc"
                     /note="Adenylate and Guanylate cyclase catalytic domain;
                     pfam00211"
                     /db_xref="CDD:425528"
     Site            order(1013,1015..1020,1062,1064..1066,1069,1142..1144,
                     1148..1149,1152..1153,1189)
                     /site_type="active"
                     /note="nucleotidyl binding site [active]"
                     /db_xref="CDD:143636"
     Site            order(1015,1066)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143636"
     Site            order(1020,1036,1039..1040,1043,1047,1062..1063,1130,1133,
                     1143..1146,1149,1189)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143636"
     CDS             1..1214
                     /gene="ADCY4"
                     /coded_by="XM_061157876.1:279..3923"
                     /db_xref="GeneID:133066621"
ORIGIN      
        1 mmplvslvgq apyyhlppph tfthmllpwt hwkplilswy lgvdsnvstk lhadvplpws
       61 wtpleyrplr rghstaiqag gagkdclssg prpwspfstm lffptslpaf apahaqspht
      121 qapgiqpqav wrragetmar lfsprqppse dlfyetyysl sqqyplllll lltvllglla
      181 llpvawasgr elaadpaflt tvlcalggfs lllvlasreq rlqrwtrpls glvwaallal
      241 ghsflftggv vsawdqvsff lfviftvyam lpldmrdait agvtsslshl lvlglylgpq
      301 pdarpallpq laanavlflc gnvagayhka lmeralratf realsslhsr rrldtekkhq
      361 ehlllsilpa ylaremkeei marlqagqgs rpestnnfhs lyvkrhqgvs vlyadivgft
      421 rlasecspke lvlmlnelfg kfdqiakehe cmrikilgdc yycvsglpls lpdhaincvr
      481 mgldmcrair klraatgvdi nmrvgvhsgs vlcgviglqk wqydvwshdv tlanhmeasg
      541 vpgrvhitga tlallagaya vedaamehrd pylrelgept ylvidpwaae edekgtvggl
      601 lsslegpkmr psllmtryle swgaakpfah lshvespvst stplpekals sfspqwsldr
      661 srtprgldee ldtgdakffq vieqlnsqkq wkqskdfnpl tlyfrekeme keyrlsalpa
      721 fkyyvactfl vflsnfiiqm lvtnrppalt itysitfllf flllfvcfse hltkcvlkgp
      781 kmlhwlptls vlvatrpglr valgtatill vfamaitslv flpavstcpf qapnvssmas
      841 nlswelpgsl plisvpysmh ccvlgflscs lflhmsfelk llllllglaa acsvflhsha
      901 wlsdcliarl ylgtldsrpg vlkepklmga vsffifffil lvlarqneyy crldflwkkk
      961 lrqeqeetet menltrllle nvlpahvapq figqnrrned lyhqsyecvc vlfasvpdfk
     1021 efysessinh egleclrlln eiiadfdell skpkfsgvek ikticstyma atglnatsgq
     1081 daqqdaeqsc ghlgtmvefa valgskldvi nkhsfnnfrl rvglnhgpvv agvigaqkpq
     1141 ydiwgntvnv asrmestgvl gkiqvteeta walqslgytc ysrgiikvkg kgqlctyfln
     1201 tdltrtgpps atlg
//
LOCUS       XP_061013860            1165 aa            linear   MAM 02-DEC-2023
DEFINITION  adenylate cyclase type 4 isoform X2 [Dama dama].
ACCESSION   XP_061013860
VERSION     XP_061013860.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157877.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1165
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1165
                     /product="adenylate cyclase type 4 isoform X2"
                     /calculated_mol_wt=129148
     Region          183..590
                     /region_name="AcyC"
                     /note="Adenylate cyclase, class 3 [Signal transduction
                     mechanisms]; COG2114"
                     /db_xref="CDD:441717"
     Region          401..555
                     /region_name="Guanylate_cyc"
                     /note="Adenylate and Guanylate cyclase catalytic domain;
                     pfam00211"
                     /db_xref="CDD:425528"
     Site            order(413,415..420,455,457..459,462,524..526,530..531,
                     534..535,574)
                     /site_type="active"
                     /note="nucleotidyl binding site [active]"
                     /db_xref="CDD:143636"
     Site            order(415,459)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143636"
     Site            order(420,432,435..436,439,443,455..456,512,515,525..528,
                     531,574)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143636"
     Region          616..721
                     /region_name="Adcy_cons_dom"
                     /note="Adenylate cyclase, conserved domain; pfam06327"
                     /db_xref="CDD:461877"
     Region          <999..1151
                     /region_name="Guanylate_cyc"
                     /note="Adenylate and Guanylate cyclase catalytic domain;
                     pfam00211"
                     /db_xref="CDD:425528"
     CDS             1..1165
                     /gene="ADCY4"
                     /coded_by="XM_061157877.1:279..3776"
                     /db_xref="GeneID:133066621"
ORIGIN      
        1 mmplvslvgq apyyhlppph tfthmllpwt hwkplilswy lgvdsnvstk lhadvplpws
       61 wtpleyrplr rghstaiqag gagkdclssg prpwspfstm lffptslpaf apahaqspht
      121 qapgiqpqav wrragetmar lfsprqppse dlfyetyysl sqqyplllll lltvllglla
      181 llpvawasgr elaadpaflt tvlcalggfs lllvlasreq rlqrwtrpls glvwaallal
      241 ghsflftggv vsawdqvsff lfviftvyam lpldmrdait agvtsslshl lvlglylgpq
      301 pdarpallpq laanavlflc gnvagayhka lmeralratf realsslhsr rrldtekkhq
      361 ehlllsilpa ylaremkeei marlqagqgs rpestnnfhs lyvkrhqgvs vlyadivgft
      421 rlasecspke lvlmlnelfg kfdqiakehe cmrikilgdc yycvsglpls lpdhaincvr
      481 mgldmcrair klraatgvdi nmrvgvhsgs vlcgviglqk wqydvwshdv tlanhmeasg
      541 vpgrvhitga tlallagaya vedaamehrd pylrelgept ylvidpwaae edekgtvggl
      601 lsslegpkmr psllmtryle swgaakpfah lshvespvst stplpekals sfspqwsldr
      661 srtprgldee ldtgdakffq vieqlnsqkq wkqskdfnpl tlyfrekeme keyrlsalpa
      721 fkyyvactfl vflsnfiiqm lvtnrppalt itysitfllf flllfvcfse hltkcvlkgp
      781 kmlhwlptls vlvatrpglr valgtatill vfamaitslv flpavstcpf qapnvssmas
      841 nlswelpgsl plisvpysmh ccvlgflscs lflhmsfelk llllllglaa acsvflhsha
      901 wlsdcliarl ylgtldsrpg vlkepklmga vsffifffil lvlarqneyy crldflwkkk
      961 lrqeqeetet menltrllle nvlpahvapq figqnrrnel lskpkfsgve kikticstym
     1021 aatglnatsg qdaqqdaeqs cghlgtmvef avalgskldv inkhsfnnfr lrvglnhgpv
     1081 vagvigaqkp qydiwgntvn vasrmestgv lgkiqvteet awalqslgyt cysrgiikvk
     1141 gkgqlctyfl ntdltrtgpp satlg
//
LOCUS       XP_061013861            1077 aa            linear   MAM 02-DEC-2023
DEFINITION  adenylate cyclase type 4 isoform X3 [Dama dama].
ACCESSION   XP_061013861
VERSION     XP_061013861.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157878.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1077
                     /product="adenylate cyclase type 4 isoform X3"
                     /calculated_mol_wt=119641
     Region          46..453
                     /region_name="AcyC"
                     /note="Adenylate cyclase, class 3 [Signal transduction
                     mechanisms]; COG2114"
                     /db_xref="CDD:441717"
     Region          264..418
                     /region_name="Guanylate_cyc"
                     /note="Adenylate and Guanylate cyclase catalytic domain;
                     pfam00211"
                     /db_xref="CDD:425528"
     Site            order(276,278..283,318,320..322,325,387..389,393..394,
                     397..398,437)
                     /site_type="active"
                     /note="nucleotidyl binding site [active]"
                     /db_xref="CDD:143636"
     Site            order(278,322)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143636"
     Site            order(283,295,298..299,302,306,318..319,375,378,388..391,
                     394,437)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143636"
     Region          479..584
                     /region_name="Adcy_cons_dom"
                     /note="Adenylate cyclase, conserved domain; pfam06327"
                     /db_xref="CDD:461877"
     Region          864..1063
                     /region_name="Guanylate_cyc"
                     /note="Adenylate and Guanylate cyclase catalytic domain;
                     pfam00211"
                     /db_xref="CDD:425528"
     Site            order(876,878..883,925,927..929,932,1005..1007,1011..1012,
                     1015..1016,1052)
                     /site_type="active"
                     /note="nucleotidyl binding site [active]"
                     /db_xref="CDD:143636"
     Site            order(878,929)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143636"
     Site            order(883,899,902..903,906,910,925..926,993,996,
                     1006..1009,1012,1052)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143636"
     CDS             1..1077
                     /gene="ADCY4"
                     /coded_by="XM_061157878.1:1020..4253"
                     /db_xref="GeneID:133066621"
ORIGIN      
        1 marlfsprqp psedlfyety yslsqqypll llllltvllg llallpvawa sgrelaadpa
       61 flttvlcalg gfslllvlas reqrlqrwtr plsglvwaal lalghsflft ggvvsawdqv
      121 sfflfviftv yamlpldmrd aitagvtssl shllvlglyl gpqpdarpal lpqlaanavl
      181 flcgnvagay hkalmeralr atfrealssl hsrrrldtek khqehlllsi lpaylaremk
      241 eeimarlqag qgsrpestnn fhslyvkrhq gvsvlyadiv gftrlasecs pkelvlmlne
      301 lfgkfdqiak ehecmrikil gdcyycvsgl plslpdhain cvrmgldmcr airklraatg
      361 vdinmrvgvh sgsvlcgvig lqkwqydvws hdvtlanhme asgvpgrvhi tgatlallag
      421 ayavedaame hrdpylrelg eptylvidpw aaeedekgtv ggllsslegp kmrpsllmtr
      481 yleswgaakp fahlshvesp vststplpek alssfspqws ldrsrtprgl deeldtgdak
      541 ffqvieqlns qkqwkqskdf npltlyfrek emekeyrlsa lpafkyyvac tflvflsnfi
      601 iqmlvtnrpp altitysitf llfflllfvc fsehltkcvl kgpkmlhwlp tlsvlvatrp
      661 glrvalgtat illvfamait slvflpavst cpfqapnvss masnlswelp gslplisvpy
      721 smhccvlgfl scslflhmsf elkllllllg laaacsvflh shawlsdcli arlylgtlds
      781 rpgvlkepkl mgavsffiff fillvlarqn eyycrldflw kkklrqeqee tetmenltrl
      841 llenvlpahv apqfigqnrr nedlyhqsye cvcvlfasvp dfkefysess inhegleclr
      901 llneiiadfd ellskpkfsg vekikticst ymaatglnat sgqdaqqdae qscghlgtmv
      961 efavalgskl dvinkhsfnn frlrvglnhg pvvagvigaq kpqydiwgnt vnvasrmest
     1021 gvlgkiqvte etawalqslg ytcysrgiik vkgkgqlcty flntdltrtg ppsatlg
//
LOCUS       XP_061013862            1036 aa            linear   MAM 02-DEC-2023
DEFINITION  adenylate cyclase type 4 isoform X4 [Dama dama].
ACCESSION   XP_061013862
VERSION     XP_061013862.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157879.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1036
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1036
                     /product="adenylate cyclase type 4 isoform X4"
                     /calculated_mol_wt=115044
     Region          1..412
                     /region_name="AcyC"
                     /note="Adenylate cyclase, class 3 [Signal transduction
                     mechanisms]; COG2114"
                     /db_xref="CDD:441717"
     Region          223..377
                     /region_name="Guanylate_cyc"
                     /note="Adenylate and Guanylate cyclase catalytic domain;
                     pfam00211"
                     /db_xref="CDD:425528"
     Site            order(235,237..242,277,279..281,284,346..348,352..353,
                     356..357)
                     /site_type="active"
                     /note="nucleotidyl binding site [active]"
                     /db_xref="CDD:143636"
     Site            order(237,281)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143636"
     Site            order(242,254,257..258,261,265,277..278,334,337,347..350,
                     353)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143636"
     Region          438..543
                     /region_name="Adcy_cons_dom"
                     /note="Adenylate cyclase, conserved domain; pfam06327"
                     /db_xref="CDD:461877"
     Region          823..1022
                     /region_name="Guanylate_cyc"
                     /note="Adenylate and Guanylate cyclase catalytic domain;
                     pfam00211"
                     /db_xref="CDD:425528"
     Site            order(835,837..842,884,886..888,891,964..966,970..971,
                     974..975,1011)
                     /site_type="active"
                     /note="nucleotidyl binding site [active]"
                     /db_xref="CDD:143636"
     Site            order(837,888)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143636"
     Site            order(842,858,861..862,865,869,884..885,952,955,965..968,
                     971,1011)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143636"
     CDS             1..1036
                     /gene="ADCY4"
                     /coded_by="XM_061157879.1:171..3281"
                     /db_xref="GeneID:133066621"
ORIGIN      
        1 mrpmvllqvp eeelaadpaf lttvlcalgg fslllvlasr eqrlqrwtrp lsglvwaall
       61 alghsflftg gvvsawdqvs fflfviftvy amlpldmrda itagvtssls hllvlglylg
      121 pqpdarpall pqlaanavlf lcgnvagayh kalmeralra tfrealsslh srrrldtekk
      181 hqehlllsil paylaremke eimarlqagq gsrpestnnf hslyvkrhqg vsvlyadivg
      241 ftrlasecsp kelvlmlnel fgkfdqiake hecmrikilg dcyycvsglp lslpdhainc
      301 vrmgldmcra irklraatgv dinmrvgvhs gsvlcgvigl qkwqydvwsh dvtlanhmea
      361 sgvpgrvhit gatlallaga yavedaameh rdpylrelge ptylvidpwa aeedekgtvg
      421 gllsslegpk mrpsllmtry leswgaakpf ahlshvespv ststplpeka lssfspqwsl
      481 drsrtprgld eeldtgdakf fqvieqlnsq kqwkqskdfn pltlyfreke mekeyrlsal
      541 pafkyyvact flvflsnfii qmlvtnrppa ltitysitfl lfflllfvcf sehltkcvlk
      601 gpkmlhwlpt lsvlvatrpg lrvalgtati llvfamaits lvflpavstc pfqapnvssm
      661 asnlswelpg slplisvpys mhccvlgfls cslflhmsfe lkllllllgl aaacsvflhs
      721 hawlsdclia rlylgtldsr pgvlkepklm gavsffifff illvlarqne yycrldflwk
      781 kklrqeqeet etmenltrll lenvlpahva pqfigqnrrn edlyhqsyec vcvlfasvpd
      841 fkefysessi nhegleclrl lneiiadfde llskpkfsgv ekikticsty maatglnats
      901 gqdaqqdaeq scghlgtmve favalgskld vinkhsfnnf rlrvglnhgp vvagvigaqk
      961 pqydiwgntv nvasrmestg vlgkiqvtee tawalqslgy tcysrgiikv kgkgqlctyf
     1021 lntdltrtgp psatlg
//
LOCUS       XP_061013863            1016 aa            linear   MAM 02-DEC-2023
DEFINITION  adenylate cyclase type 4 isoform X5 [Dama dama].
ACCESSION   XP_061013863
VERSION     XP_061013863.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157880.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1016
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1016
                     /product="adenylate cyclase type 4 isoform X5"
                     /calculated_mol_wt=113242
     Region          183..590
                     /region_name="AcyC"
                     /note="Adenylate cyclase, class 3 [Signal transduction
                     mechanisms]; COG2114"
                     /db_xref="CDD:441717"
     Region          401..555
                     /region_name="Guanylate_cyc"
                     /note="Adenylate and Guanylate cyclase catalytic domain;
                     pfam00211"
                     /db_xref="CDD:425528"
     Site            order(413,415..420,455,457..459,462,524..526,530..531,
                     534..535,574)
                     /site_type="active"
                     /note="nucleotidyl binding site [active]"
                     /db_xref="CDD:143636"
     Site            order(415,459)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143636"
     Site            order(420,432,435..436,439,443,455..456,512,515,525..528,
                     531,574)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143636"
     Region          616..721
                     /region_name="Adcy_cons_dom"
                     /note="Adenylate cyclase, conserved domain; pfam06327"
                     /db_xref="CDD:461877"
     CDS             1..1016
                     /gene="ADCY4"
                     /coded_by="XM_061157880.1:279..3329"
                     /db_xref="GeneID:133066621"
ORIGIN      
        1 mmplvslvgq apyyhlppph tfthmllpwt hwkplilswy lgvdsnvstk lhadvplpws
       61 wtpleyrplr rghstaiqag gagkdclssg prpwspfstm lffptslpaf apahaqspht
      121 qapgiqpqav wrragetmar lfsprqppse dlfyetyysl sqqyplllll lltvllglla
      181 llpvawasgr elaadpaflt tvlcalggfs lllvlasreq rlqrwtrpls glvwaallal
      241 ghsflftggv vsawdqvsff lfviftvyam lpldmrdait agvtsslshl lvlglylgpq
      301 pdarpallpq laanavlflc gnvagayhka lmeralratf realsslhsr rrldtekkhq
      361 ehlllsilpa ylaremkeei marlqagqgs rpestnnfhs lyvkrhqgvs vlyadivgft
      421 rlasecspke lvlmlnelfg kfdqiakehe cmrikilgdc yycvsglpls lpdhaincvr
      481 mgldmcrair klraatgvdi nmrvgvhsgs vlcgviglqk wqydvwshdv tlanhmeasg
      541 vpgrvhitga tlallagaya vedaamehrd pylrelgept ylvidpwaae edekgtvggl
      601 lsslegpkmr psllmtryle swgaakpfah lshvespvst stplpekals sfspqwsldr
      661 srtprgldee ldtgdakffq vieqlnsqkq wkqskdfnpl tlyfrekeme keyrlsalpa
      721 fkyyvactfl vflsnfiiqm lvtnrppalt itysitfllf flllfvcfse hltkcvlkgp
      781 kmlhwlptls vlvatrpglr valgtatill vfamaitslv flpavstcpf qapnvssmas
      841 nlswelpgsl plisvpysmh ccvlgflscs lflhmsfelk llllllglaa acsvflhsha
      901 wlsdcliarl ylgtldsrpg vlkepklmga vsffifffil lvlarqneyy crldflwkkk
      961 lrqeqeetet menltrllle nvlpahvapq figqnrrnes qtlrsstlnp astmrg
//
LOCUS       XP_061013864             945 aa            linear   MAM 02-DEC-2023
DEFINITION  adenylate cyclase type 4 isoform X6 [Dama dama].
ACCESSION   XP_061013864
VERSION     XP_061013864.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157881.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..945
                     /product="adenylate cyclase type 4 isoform X6"
                     /calculated_mol_wt=104991
     Region          <1..321
                     /region_name="AcyC"
                     /note="Adenylate cyclase, class 3 [Signal transduction
                     mechanisms]; COG2114"
                     /db_xref="CDD:441717"
     Region          132..286
                     /region_name="Guanylate_cyc"
                     /note="Adenylate and Guanylate cyclase catalytic domain;
                     pfam00211"
                     /db_xref="CDD:425528"
     Site            order(144,146..151,186,188..190,193,255..257,261..262,
                     265..266,305)
                     /site_type="active"
                     /note="nucleotidyl binding site [active]"
                     /db_xref="CDD:143636"
     Site            order(146,190)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143636"
     Site            order(151,163,166..167,170,174,186..187,243,246,256..259,
                     262,305)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143636"
     Region          347..452
                     /region_name="Adcy_cons_dom"
                     /note="Adenylate cyclase, conserved domain; pfam06327"
                     /db_xref="CDD:461877"
     Region          732..931
                     /region_name="Guanylate_cyc"
                     /note="Adenylate and Guanylate cyclase catalytic domain;
                     pfam00211"
                     /db_xref="CDD:425528"
     Site            order(744,746..751,793,795..797,800,873..875,879..880,
                     883..884,920)
                     /site_type="active"
                     /note="nucleotidyl binding site [active]"
                     /db_xref="CDD:143636"
     Site            order(746,797)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143636"
     Site            order(751,767,770..771,774,778,793..794,861,864,874..877,
                     880,920)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143636"
     CDS             1..945
                     /gene="ADCY4"
                     /coded_by="XM_061157881.1:392..3229"
                     /db_xref="GeneID:133066621"
ORIGIN      
        1 mlpldmrdai tagvtsslsh llvlglylgp qpdarpallp qlaanavlfl cgnvagayhk
       61 almeralrat frealsslhs rrrldtekkh qehlllsilp aylaremkee imarlqagqg
      121 srpestnnfh slyvkrhqgv svlyadivgf trlasecspk elvlmlnelf gkfdqiakeh
      181 ecmrikilgd cyycvsglpl slpdhaincv rmgldmcrai rklraatgvd inmrvgvhsg
      241 svlcgviglq kwqydvwshd vtlanhmeas gvpgrvhitg atlallagay avedaamehr
      301 dpylrelgep tylvidpwaa eedekgtvgg llsslegpkm rpsllmtryl eswgaakpfa
      361 hlshvespvs tstplpekal ssfspqwsld rsrtprglde eldtgdakff qvieqlnsqk
      421 qwkqskdfnp ltlyfrekem ekeyrlsalp afkyyvactf lvflsnfiiq mlvtnrppal
      481 titysitfll fflllfvcfs ehltkcvlkg pkmlhwlptl svlvatrpgl rvalgtatil
      541 lvfamaitsl vflpavstcp fqapnvssma snlswelpgs lplisvpysm hccvlgflsc
      601 slflhmsfel kllllllgla aacsvflhsh awlsdcliar lylgtldsrp gvlkepklmg
      661 avsffifffi llvlarqney ycrldflwkk klrqeqeete tmenltrlll envlpahvap
      721 qfigqnrrne dlyhqsyecv cvlfasvpdf kefysessin hegleclrll neiiadfdel
      781 lskpkfsgve kikticstym aatglnatsg qdaqqdaeqs cghlgtmvef avalgskldv
      841 inkhsfnnfr lrvglnhgpv vagvigaqkp qydiwgntvn vasrmestgv lgkiqvteet
      901 awalqslgyt cysrgiikvk gkgqlctyfl ntdltrtgpp satlg
//
LOCUS       XP_061013865             636 aa            linear   MAM 02-DEC-2023
DEFINITION  nucleolar protein 9 [Dama dama].
ACCESSION   XP_061013865
VERSION     XP_061013865.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157882.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..636
                     /product="nucleolar protein 9"
                     /calculated_mol_wt=69306
     Region          254..>457
                     /region_name="GCP_N_terminal"
                     /note="Gamma tubulin complex component N-terminal;
                     pfam17681"
                     /db_xref="CDD:465456"
     Region          512..>600
                     /region_name="Pumilio"
                     /note="Pumilio-family RNA binding domain; cl46378"
                     /db_xref="CDD:480718"
     CDS             1..636
                     /gene="NOP9"
                     /coded_by="XM_061157882.1:118..2028"
                     /db_xref="GeneID:133066623"
ORIGIN      
        1 mglgpgsphk qgrrfpaggk rgrgakgagr pppgrqrhpc pppdgrsela pdehphlspe
       61 algyfrrals alkeapetge erelmvhnvl keaeaqalgl atnrsgseml qellgfsprk
      121 plcrvwaalh snlrfvachr cgvhvlqsal lqlprllgsp aeeeeeeeed gkdghvetle
      181 elvlglaaev cddflfycgd thgsfvvrtl lqvlggtlle serarhrgsq speaqkapsr
      241 eckatdfevp etflnclqnl sscflkdiav fitdkissfc lqvalqilhs klpqfcahlc
      301 navigylssr nssadgspll lflrdqtssr lleqvllvse ppklqslfed hlqgqlqala
      361 ahsianfplq rfldaittpe llspvfeels paleavlaqg hpgvvialvg acrrvgthqa
      421 qvlqllleaf hcaepssrqv acvplfaalm ayevyyglee eegavpmehq vematarelg
      481 evtvlgslll qhllhfsspc lilgslgalt gpqlltlars pagshvldav lsspsvtrkq
      541 rrrvlqtlkg hyvtlacsrh gsrvldavws gaalgarkei aaelgernqe lirdpfghhv
      601 arnvalttfl krreawereq gavakrrral nsiled
//
LOCUS       XP_061013866             467 aa            linear   MAM 02-DEC-2023
DEFINITION  receptor-interacting serine/threonine-protein kinase 3 isoform X1
            [Dama dama].
ACCESSION   XP_061013866
VERSION     XP_061013866.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157883.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..467
                     /product="receptor-interacting serine/threonine-protein
                     kinase 3 isoform X1"
                     /calculated_mol_wt=50867
     Region          12..231
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Region          396..416
                     /region_name="RHIM"
                     /note="RIP homotypic interaction motif; pfam12721"
                     /db_xref="CDD:463679"
     CDS             1..467
                     /gene="RIPK3"
                     /coded_by="XM_061157883.1:170..1573"
                     /db_xref="GeneID:133066624"
ORIGIN      
        1 msgstlwkai srevkamssl hnkhvllllg vtekleweym sgpalvtqfm engslagllq
       61 phcprpwrll crllqelvlg mcylhsqnpv llhrdlkpsn vlldselhak vadfglstfq
      121 ggsqsgagsg esgctpayla pellaninrk asrasdvysf giltwvvlag reaeivsqts
      181 lvreavcerq irppltelpp sgpetpglee ltdlmqqcws hepqkrpsfq ecrtntkkvl
      241 dlvnkgdvsg rkmnnavsmv keflsehrgs nspglertei dgprettgsh dplvsemmnl
      301 nlegcpssvp ekctnllesi rvqreqvppa wtaetssdst arppqtpetl pfrnqnpcpt
      361 spwtpgpgpq gsqgaerrdt swpprgpapn vvpgswlpti sncqgiqlgn hnhmviqggt
      421 alsmqgvapg gvdrgpqctl hgesskeglq epeawsvpkd wyhnskn
//
LOCUS       XP_061013867             466 aa            linear   MAM 02-DEC-2023
DEFINITION  receptor-interacting serine/threonine-protein kinase 3 isoform X2
            [Dama dama].
ACCESSION   XP_061013867
VERSION     XP_061013867.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157884.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..466
                     /product="receptor-interacting serine/threonine-protein
                     kinase 3 isoform X2"
                     /calculated_mol_wt=50786
     Region          12..230
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Region          395..415
                     /region_name="RHIM"
                     /note="RIP homotypic interaction motif; pfam12721"
                     /db_xref="CDD:463679"
     CDS             1..466
                     /gene="RIPK3"
                     /coded_by="XM_061157884.1:170..1570"
                     /db_xref="GeneID:133066624"
ORIGIN      
        1 msgstlwkai srevkamssl hnkhvllllg vtekleweym sgpalvtqfm engslagllq
       61 phcprpwrll crllqelvlg mcylhsqnpv llhrdlkpsn vlldselhak vadfglstfq
      121 ggsqsgagsg esgctpayla pellaninrk asrasdvysf giltwvvlag reaemsqtsl
      181 vreavcerqi rppltelpps gpetpgleel tdlmqqcwsh epqkrpsfqe crtntkkvld
      241 lvnkgdvsgr kmnnavsmvk eflsehrgsn spglerteid gprettgshd plvsemmnln
      301 legcpssvpe kctnllesir vqreqvppaw taetssdsta rppqtpetlp frnqnpcpts
      361 pwtpgpgpqg sqgaerrdts wpprgpapnv vpgswlptis ncqgiqlgnh nhmviqggta
      421 lsmqgvapgg vdrgpqctlh gesskeglqe peawsvpkdw yhnskn
//
LOCUS       XP_061013868             451 aa            linear   MAM 02-DEC-2023
DEFINITION  receptor-interacting serine/threonine-protein kinase 3 isoform X3
            [Dama dama].
ACCESSION   XP_061013868
VERSION     XP_061013868.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157885.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..451
                     /product="receptor-interacting serine/threonine-protein
                     kinase 3 isoform X3"
                     /calculated_mol_wt=49121
     Region          1..215
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Region          380..400
                     /region_name="RHIM"
                     /note="RIP homotypic interaction motif; pfam12721"
                     /db_xref="CDD:463679"
     CDS             1..451
                     /gene="RIPK3"
                     /coded_by="XM_061157885.1:339..1694"
                     /db_xref="GeneID:133066624"
ORIGIN      
        1 msslhnkhvl lllgvtekle weymsgpalv tqfmengsla gllqphcprp wrllcrllqe
       61 lvlgmcylhs qnpvllhrdl kpsnvlldse lhakvadfgl stfqggsqsg agsgesgctp
      121 aylapellan inrkasrasd vysfgiltwv vlagreaeiv sqtslvreav cerqirpplt
      181 elppsgpetp gleeltdlmq qcwshepqkr psfqecrtnt kkvldlvnkg dvsgrkmnna
      241 vsmvkeflse hrgsnspgle rteidgpret tgshdplvse mmnlnlegcp ssvpekctnl
      301 lesirvqreq vppawtaets sdstarppqt petlpfrnqn pcptspwtpg pgpqgsqgae
      361 rrdtswpprg papnvvpgsw lptisncqgi qlgnhnhmvi qggtalsmqg vapggvdrgp
      421 qctlhgessk eglqepeaws vpkdwyhnsk n
//
LOCUS       XP_061013869             514 aa            linear   MAM 02-DEC-2023
DEFINITION  receptor-interacting serine/threonine-protein kinase 3 isoform X4
            [Dama dama].
ACCESSION   XP_061013869
VERSION     XP_061013869.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157886.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..514
                     /product="receptor-interacting serine/threonine-protein
                     kinase 3 isoform X4"
                     /calculated_mol_wt=55829
     Region          27..279
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(27..30,33,35,48,50,73,94..97,142,146..147,149,
                     159..160)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          443..463
                     /region_name="RHIM"
                     /note="RIP homotypic interaction motif; pfam12721"
                     /db_xref="CDD:463679"
     CDS             1..514
                     /gene="RIPK3"
                     /coded_by="XM_061157886.1:170..1714"
                     /db_xref="GeneID:133066624"
ORIGIN      
        1 msgstlwpkg asaplvpiee lenpeligkg gfgsvfrahh rswgldvavk ivnskaisre
       61 vkamsslhnk hvllllgvte kleweymsgp alvtqfmeng slagllqphc prpwrllcrl
      121 lqelvlgmcy lhsqnpvllh rdlkpsnvll dselhakvad fglstfqggs qsgagsgesg
      181 ctpaylapel laninrkasr asdvysfgil twvvlagrea eivsqtslvr eavcerqirp
      241 pltelppsgp etpgleeltd lmqqcwshep qkrpsfqecr tntkkvldlv nkgdvsgrkm
      301 nnavsmvkef lsehrgsnsp glerteidgp rettgshdpl vsemmnlnle gcpssvpekc
      361 tnllesirvq reqvppawta etssdstarp pqtpetlpfr nqnpcptspw tpgpgpqgsq
      421 gaerrdtswp prgpapnvvp gswlptisnc qgiqlgnhnh mviqggtals mqgvapggvd
      481 rgpqctlhge sskeglqepe awsvpkdwyh nskn
//
LOCUS       XP_061013870             358 aa            linear   MAM 02-DEC-2023
DEFINITION  leukotriene B4 receptor 2 [Dama dama].
ACCESSION   XP_061013870
VERSION     XP_061013870.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157887.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..358
                     /product="leukotriene B4 receptor 2"
                     /calculated_mol_wt=37398
     Region          21..300
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          23..47
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320250"
     Region          58..79
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320250"
     Region          95..117
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320250"
     Region          140..156
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320250"
     Region          179..202
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320250"
     Region          223..245
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320250"
     Region          267..292
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320250"
     CDS             1..358
                     /gene="LTB4R2"
                     /coded_by="XM_061157887.1:111..1187"
                     /db_xref="GeneID:133066625"
ORIGIN      
        1 msacyrppgn etllswktsr atgtafllla allglpgngf vvwslagwrs argrplaatl
       61 vlhlaladga vllltplfva fltrqawplg qagckvvyyv calsmyasvl ltgllslqrc
      121 lavtrpflap rlrspalarr lllavwlaal vlatpaavyr hlgadrvcql chpsaahaaa
      181 hlsletltaf vlpfglvlgc ygvtlarlrg grwgagrrvt rvgrlvgaiv lafgllwapy
      241 havnvlqala alappegafa rlggagqaar agttalaffs ssvnpvlylf tagdllprag
      301 prfllrlfeg sgeargggrs regtlelrat prlkvvgqgg gngdpgggaq kdsrgwdp
//
LOCUS       XP_061013871             349 aa            linear   MAM 02-DEC-2023
DEFINITION  leukotriene B4 receptor 1 [Dama dama].
ACCESSION   XP_061013871
VERSION     XP_061013871.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157888.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..349
                     /product="leukotriene B4 receptor 1"
                     /calculated_mol_wt=37318
     Region          19..298
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          21..45
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320249"
     Region          54..75
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320249"
     Region          91..113
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320249"
     Region          136..152
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320249"
     Region          180..203
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320249"
     Region          221..243
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320249"
     Region          265..290
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320249"
     CDS             1..349
                     /gene="LTB4R"
                     /coded_by="XM_061157888.1:1445..2494"
                     /db_xref="GeneID:133066626"
ORIGIN      
        1 mnttspaaps spsvsfisll viivlsvala vglpgnsfvv wsilaklpkr svtalmvlhl
       61 aladlavllt apfflhsvar gtwtfgtsgc rlfhyvcgvs myasvllita msldrslava
      121 lpfvsqklrt kavawrvlag iwvvsvllat pvllyrtvyl rpdnrslicf ptypserhra
      181 fhlffevitg fllpflvvva sycdigrrlr arrfrrsrrt grlvaliila faafwlpyhv
      241 vnlaegfraa agkavgsgpv gkrlllarhv litvaflsss vnpvlyacag ggllrsagmg
      301 fvakllegtg seasssrrgg tlaqtvrgtp aspepdpaes ltastnple
//
LOCUS       XP_061013872             349 aa            linear   MAM 02-DEC-2023
DEFINITION  leukotriene B4 receptor 1 [Dama dama].
ACCESSION   XP_061013872
VERSION     XP_061013872.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157889.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..349
                     /product="leukotriene B4 receptor 1"
                     /calculated_mol_wt=37318
     Region          19..298
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          21..45
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320249"
     Region          54..75
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320249"
     Region          91..113
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320249"
     Region          136..152
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320249"
     Region          180..203
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320249"
     Region          221..243
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320249"
     Region          265..290
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320249"
     CDS             1..349
                     /gene="LTB4R"
                     /coded_by="XM_061157889.1:1065..2114"
                     /db_xref="GeneID:133066626"
ORIGIN      
        1 mnttspaaps spsvsfisll viivlsvala vglpgnsfvv wsilaklpkr svtalmvlhl
       61 aladlavllt apfflhsvar gtwtfgtsgc rlfhyvcgvs myasvllita msldrslava
      121 lpfvsqklrt kavawrvlag iwvvsvllat pvllyrtvyl rpdnrslicf ptypserhra
      181 fhlffevitg fllpflvvva sycdigrrlr arrfrrsrrt grlvaliila faafwlpyhv
      241 vnlaegfraa agkavgsgpv gkrlllarhv litvaflsss vnpvlyacag ggllrsagmg
      301 fvakllegtg seasssrrgg tlaqtvrgtp aspepdpaes ltastnple
//
LOCUS       XP_061013873             349 aa            linear   MAM 02-DEC-2023
DEFINITION  leukotriene B4 receptor 1 [Dama dama].
ACCESSION   XP_061013873
VERSION     XP_061013873.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157890.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..349
                     /product="leukotriene B4 receptor 1"
                     /calculated_mol_wt=37318
     Region          19..298
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          21..45
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320249"
     Region          54..75
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320249"
     Region          91..113
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320249"
     Region          136..152
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320249"
     Region          180..203
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320249"
     Region          221..243
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320249"
     Region          265..290
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320249"
     CDS             1..349
                     /gene="LTB4R"
                     /coded_by="XM_061157890.1:933..1982"
                     /db_xref="GeneID:133066626"
ORIGIN      
        1 mnttspaaps spsvsfisll viivlsvala vglpgnsfvv wsilaklpkr svtalmvlhl
       61 aladlavllt apfflhsvar gtwtfgtsgc rlfhyvcgvs myasvllita msldrslava
      121 lpfvsqklrt kavawrvlag iwvvsvllat pvllyrtvyl rpdnrslicf ptypserhra
      181 fhlffevitg fllpflvvva sycdigrrlr arrfrrsrrt grlvaliila faafwlpyhv
      241 vnlaegfraa agkavgsgpv gkrlllarhv litvaflsss vnpvlyacag ggllrsagmg
      301 fvakllegtg seasssrrgg tlaqtvrgtp aspepdpaes ltastnple
//
LOCUS       XP_061013874             349 aa            linear   MAM 02-DEC-2023
DEFINITION  leukotriene B4 receptor 1 [Dama dama].
ACCESSION   XP_061013874
VERSION     XP_061013874.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157891.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..349
                     /product="leukotriene B4 receptor 1"
                     /calculated_mol_wt=37318
     Region          19..298
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          21..45
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320249"
     Region          54..75
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320249"
     Region          91..113
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320249"
     Region          136..152
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320249"
     Region          180..203
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320249"
     Region          221..243
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320249"
     Region          265..290
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320249"
     CDS             1..349
                     /gene="LTB4R"
                     /coded_by="XM_061157891.1:163..1212"
                     /db_xref="GeneID:133066626"
ORIGIN      
        1 mnttspaaps spsvsfisll viivlsvala vglpgnsfvv wsilaklpkr svtalmvlhl
       61 aladlavllt apfflhsvar gtwtfgtsgc rlfhyvcgvs myasvllita msldrslava
      121 lpfvsqklrt kavawrvlag iwvvsvllat pvllyrtvyl rpdnrslicf ptypserhra
      181 fhlffevitg fllpflvvva sycdigrrlr arrfrrsrrt grlvaliila faafwlpyhv
      241 vnlaegfraa agkavgsgpv gkrlllarhv litvaflsss vnpvlyacag ggllrsagmg
      301 fvakllegtg seasssrrgg tlaqtvrgtp aspepdpaes ltastnple
//
LOCUS       XP_061013875             313 aa            linear   MAM 02-DEC-2023
DEFINITION  dehydrogenase/reductase SDR family member 1 isoform X1 [Dama dama].
ACCESSION   XP_061013875
VERSION     XP_061013875.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157892.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..313
                     /product="dehydrogenase/reductase SDR family member 1
                     isoform X1"
                     /calculated_mol_wt=34001
     Region          5..271
                     /region_name="DHRS1-like_SDR_c"
                     /note="human dehydrogenase/reductase (SDR family) member 1
                     (DHRS1) -like, classical (c) SDRs; cd09763"
                     /db_xref="CDD:187664"
     Site            order(14,16..19,38..40,44,63..65,92..94,122,149,163,167,
                     192,196..197,199,227..228)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187664"
     Site            order(68,111,113,116..117,120,125,128,132,135,153,155,157,
                     161,165,172..173,175..177,179..180)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:187664"
     Site            order(123,151,163,167)
                     /site_type="active"
                     /db_xref="CDD:187664"
     CDS             1..313
                     /gene="DHRS1"
                     /coded_by="XM_061157892.1:238..1179"
                     /db_xref="GeneID:133066628"
ORIGIN      
        1 mpapmkgqvc vvtgasrgig rgialqlcqa gatvyitgrh ldtlqataqe aqsrggrcvp
       61 vvcdssqere vrslfeqvdr eqqgrldvlv nnayagvqpi lnnskksfwe spasiwddin
      121 nvglrghylc svygarlmvp agrgliviis sigglqylfs vpygvgkaac drmaadcaqe
      181 lrrhgvsyvs lwpgvvqtel lkehimkeen asdplikqfk frfssaette msgkcvvala
      241 tdpnilslsg kvlpscdlar ryglrdvdgr pvqdylslss alshvsslgw lasylpgflr
      301 vpkwvmtlya skf
//
LOCUS       XP_061013876             265 aa            linear   MAM 02-DEC-2023
DEFINITION  dehydrogenase/reductase SDR family member 1 isoform X2 [Dama dama].
ACCESSION   XP_061013876
VERSION     XP_061013876.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157893.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..265
                     /product="dehydrogenase/reductase SDR family member 1
                     isoform X2"
                     /calculated_mol_wt=28669
     Region          5..223
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(14,16..17,19,38..40,101..103,115,119,145..148)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(75,103,115,119)
                     /site_type="active"
                     /db_xref="CDD:187535"
     CDS             1..265
                     /gene="DHRS1"
                     /coded_by="XM_061157893.1:238..1035"
                     /db_xref="GeneID:133066628"
ORIGIN      
        1 mpapmkgqvc vvtgasrgig rgialqlcqa gatvyitgrh ldtlqataqe pilnnskksf
       61 wespasiwdd innvglrghy lcsvygarlm vpagrglivi issigglqyl fsvpygvgka
      121 acdrmaadca qelrrhgvsy vslwpgvvqt ellkehimke enasdplikq fkfrfssaet
      181 temsgkcvva latdpnilsl sgkvlpscdl arryglrdvd grpvqdylsl ssalshvssl
      241 gwlasylpgf lrvpkwvmtl yaskf
//
LOCUS       XP_061013877             219 aa            linear   MAM 02-DEC-2023
DEFINITION  lipid transferase CIDEB [Dama dama].
ACCESSION   XP_061013877
VERSION     XP_061013877.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157894.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..219
                     /product="lipid transferase CIDEB"
                     /calculated_mol_wt=24620
     Region          34..114
                     /region_name="CIDE_N"
                     /note="CIDE_N domain, found at the N-terminus of the CIDE
                     (cell death-inducing DFF45-like effector) proteins, as
                     well as CAD nuclease (caspase-activated DNase/DNA
                     fragmentation factor, DFF40) and its inhibitor,
                     ICAD(DFF45). These proteins are associated with...;
                     cl02541"
                     /db_xref="CDD:470607"
     Site            order(39,48..49,51..52,62,66,80,82..83,88..89,108,110)
                     /site_type="other"
                     /note="putative heterodimer interaction sites [polypeptide
                     binding]"
                     /db_xref="CDD:119367"
     CDS             1..219
                     /gene="CIDEB"
                     /coded_by="XM_061157894.1:126..785"
                     /db_xref="GeneID:133066629"
ORIGIN      
        1 meylsnldps gllrsvanms sdlgrkvwts apppqrpfrv cdhkrttrkg ltaatrqell
       61 dkaletlvls galtlvleed gttvesedff qlleddtclm vlelgqswrp rrsgvlpysl
      121 grekpkhsqd iaritfdvyk qsprdlfgsl nikatfygly smscdiqglg pkrilrellr
      181 wassllqglg hlllgisstl rravegserw qrqgrlkpy
//
LOCUS       XP_061013878             901 aa            linear   MAM 02-DEC-2023
DEFINITION  nuclear factor of activated T-cells, cytoplasmic 4 [Dama dama].
ACCESSION   XP_061013878
VERSION     XP_061013878.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157895.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..901
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..901
                     /product="nuclear factor of activated T-cells, cytoplasmic
                     4"
                     /calculated_mol_wt=95338
     Region          <50..407
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          407..580
                     /region_name="RHD-n_NFAT"
                     /note="N-terminal sub-domain of the Rel homology domain
                     (RHD) of nuclear factor of activated T-cells (NFAT)
                     proteins; cd07881"
                     /db_xref="CDD:143641"
     Site            order(430,433,435..436,438..440,487,528,530..531,545..546,
                     548,579)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143641"
     Region          585..685
                     /region_name="IPT_NFAT"
                     /note="IPT domain of the NFAT family of transcription
                     factors. NFAT transcription complexes are a target of
                     calcineurin, a calcium dependent phosphatase, and activate
                     genes mainly involved in cell-cell-interaction; cd01178"
                     /db_xref="CDD:238583"
     Site            order(609,673)
                     /site_type="DNA binding"
                     /note="DNA binding sites [nucleotide binding]"
                     /db_xref="CDD:238583"
     CDS             1..901
                     /gene="NFATC4"
                     /coded_by="XM_061157895.1:169..2874"
                     /db_xref="GeneID:133066630"
ORIGIN      
        1 mgaascedee lefklvfgee keapplgagg ageeldseda ppccrlalge pppygaapig
       61 iprpppprpg mhsppprpap spgtwesqpa rsvrlggpgg ssggagggrv lecpsirits
      121 isptpdppaa lednpdpwge gsprdypppe gfggyreagg qgggpffsps pgssslssws
      181 ffsdasdeaa lyaacdeves elneaasrfg lgsplpspra sprpwtpddp wslygpspgg
      241 rgpedswlll sapgptpasp rpaspcgkrr ysssgtpssa spalsrrgsl geegpepppp
      301 pplplvrdpg spgpfdyvga psaesipqkt rrtsseqava ltrseepapc ngklpsgvee
      361 agappggprk evagmdylav psplawskar igghspifrt salppldwpl psqyeqlelr
      421 ievqprahhr ahyetegsrg avkaapgghp vvkllgysek pltlqmfigt adernlrpha
      481 fyqvhritgk mvatasyeav vsgtkvlemt llpennmaan idcagilklr nsdielrkge
      541 tdigrkntrv rlvfrvhvpq gsgkvvsvqt asvpiecsqr saqelpqvea yspsacsvrg
      601 geelvltgsn flpdskvvfi ergpdgklqw eeeatvnrlq snevtltltv peysnkrvsr
      661 pvqvyfyvsn grrkrsptqs fkflpvifke eplpdaslrg fpsasgppfg sdmdfspprp
      721 pypsyphedp ayetpylseg fsygtpplyp qtgpppsyrp glrmfpetgg ttgcarpppv
      781 sflprpfpsd pyggrgspfp lglqfpppsp frpplpsspp legpfppqgs vrpppaegys
      841 evgpsygpge gapeqeksrg gyasgfrdsv piqgitleev seiigrdlsg fpappgeepp
      901 a
//
LOCUS       XP_061013880            1891 aa            linear   MAM 02-DEC-2023
DEFINITION  protein NYNRIN [Dama dama].
ACCESSION   XP_061013880
VERSION     XP_061013880.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157897.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1891
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1891
                     /product="protein NYNRIN"
                     /calculated_mol_wt=208352
     Region          12..73
                     /region_name="KH-I_N4BP1_like_rpt1"
                     /note="first type I K homology (KH) RNA-binding domain
                     found in the family of NEDD4-binding protein 1 (N4BP1);
                     cd09032"
                     /db_xref="CDD:411808"
     Region          75..140
                     /region_name="KH-I_NYNRIN_like"
                     /note="type I K homology (KH) RNA-binding domain found in
                     the subfamily of NYN domain and retroviral integrase
                     catalytic domain-containing protein (NYNRIN); cd22477"
                     /db_xref="CDD:411905"
     Site            order(86,88..90,92..96,99..100,103..104,109..112)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:411905"
     Region          <413..696
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          780..904
                     /region_name="PIN_N4BP1-like"
                     /note="PRORP-like PIN domain of NEDD4 binding protein 1
                     and related proteins; cd18728"
                     /db_xref="CDD:350295"
     Region          1123..1223
                     /region_name="RT_RNaseH_2"
                     /note="RNase H-like domain found in reverse transcriptase;
                     pfam17919"
                     /db_xref="CDD:465567"
     Region          1529..1582
                     /region_name="Integrase_H2C2"
                     /note="Integrase zinc binding domain; pfam17921"
                     /db_xref="CDD:465569"
     CDS             1..1891
                     /gene="NYNRIN"
                     /coded_by="XM_061157897.1:701..6376"
                     /db_xref="GeneID:133066631"
ORIGIN      
        1 mllsggdppa qewfmvqtks kprvqrqrlq vqrifrvkln afqsrpdtpy fwlqlegpre
       61 nlgkakeylk glcnpelwke vrypaalhca flgaqglfld clcwstlayl vpgppgslmv
      121 ggltesfimt qnwleelvgr lrwgpapllt prgiweaevt rafgalvwir gdqyagdllq
      181 lppavqelll slvrdaagke diiqwlsrig tsdshsdpel licpthqqke gptmaavgdg
      241 pgpflemgsp enskrltslg atgalisgtp gsntqqetan qlvrvtsnnq ggmdcareeg
      301 svqagssqdp vdhtqassqq rqvrrgedkl plqppvsals vcspwkawtp gptfaplwpg
      361 aiaatfwrin elhslhlawl lsqacfsfpf wqrplgpiqf klpgqnplpl nlgwkqkelv
      421 plpsvessdc tpdggpggea alqncprpet pknvmsllvv sggsgvkdks ipglpqigpp
      481 lpstpqlqar selgdqesmp wdrkgpeeep vpvpppgqgv paapggltap sgpdsktvpe
      541 tlkvpvaaam ptaqtpptsp vlpaapkvpe tqmtaavpee raaskvpsap tkpaaqvgpt
      601 aqkaalgepa paapqtptaq krqaaktspa gpqtsraqsg papktgptap kapaapqtsr
      661 tpktpaaqka ptgpgstlda gkpisegqpp srgsasflkg qgqagsqgpp csgtstpsgk
      721 rqpqvegllg aswegtprqp trhpqasntv tsfqryheal ntpfeldlse epgnpelrrv
      781 vidgssvamv hglqhffscr giamavqyfw nrghrevtvf iptwqlkknr rvreshfltk
      841 lhslkmlsit psqlengkki ttydyrfmvk laeetdgiiv tneqlhvlmn nskklmvkdr
      901 llpftfagnl fmvpddplgr dgptldeflk kpnrldtdig nflkvwktlp pssasiselr
      961 ddtresgple slqnveevre eeeveeeeer qdeeqreeqe mqkpaeeeee dldsslmsvf
     1021 raecpslsee ilrclslhdp qdealdidlq pavaspslgi pwdgkapcqq vlaqlaqlti
     1081 psnftalsff mgftdshrdv ipdyealvap lhgllkqkpd wrweleheka flalkralvs
     1141 alclsipnpq lpfhlevtvs qvaltavvyq ehsgrkhpva ytskpllpde dsegpqsggd
     1201 spyavawalk hfsryigetp vvldlfyasr tsvdpeawdg rrvakawlir wallvqdkgk
     1261 raleltllqg llgknrlltp tasmprlfqv lppfsdlstf vcihmsgycf yredewcagf
     1321 glyvlsptsp pvslsfscsp ytptyahlaa vacglerfgq shmpvvflth cnwifsllwe
     1381 llplwrargf lssdgtplph psllsyiidl tsglsslpfi yrtsyrgslf avtvdtlake
     1441 gaqggdqcwn lpndvpapvv tprtlckrpd llalqrsdst ladimaklqa gqkvsnsspf
     1501 ssafsslsld kesgllmfkg dkrprvwvvp rqlrrdlifa vhdgpmgahq rpeetyrklr
     1561 mlgwwpgmqe hvrhycrscl fciprsllgs evkvieslwp lrstapwsnl qievvgpvtv
     1621 seeghkhvli vadpntrwve afplkpytht avaqlllqhv farwgipvrl eaaqgpqfar
     1681 hvlvscglal gvhvaspsrd lqfpcltssr aywefkralk efiflhgkkw aaclpllhla
     1741 frasssqasp fhiltgaeer lteplwwems sanieglkmd lfllqltrel lelhwraaek
     1801 tsekaenrrf rrerqerewn vgdqvlvlsl prngssakwv gpfyvgdrls psfyrvwgfp
     1861 tpeklgciyp sslmkpfaks vtplsfkvle q
//
LOCUS       XP_061013881             670 aa            linear   MAM 02-DEC-2023
DEFINITION  protein KHNYN [Dama dama].
ACCESSION   XP_061013881
VERSION     XP_061013881.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157898.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..670
                     /product="protein KHNYN"
                     /calculated_mol_wt=73963
     Region          12..74
                     /region_name="KH-I_N4BP1_like_rpt1"
                     /note="first type I K homology (KH) RNA-binding domain
                     found in the family of NEDD4-binding protein 1 (N4BP1);
                     cd09032"
                     /db_xref="CDD:411808"
     Region          76..141
                     /region_name="KH-I_NYNRIN_like"
                     /note="type I K homology (KH) RNA-binding domain found in
                     the subfamily of NYN domain and retroviral integrase
                     catalytic domain-containing protein (NYNRIN); cd22477"
                     /db_xref="CDD:411905"
     Site            order(87,89..91,93..97,100..101,104..105,110..113)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:411905"
     Region          427..580
                     /region_name="RNase_Zc3h12a"
                     /note="Zc3h12a-like Ribonuclease NYN domain; pfam11977"
                     /db_xref="CDD:403256"
     CDS             1..670
                     /gene="KHNYN"
                     /coded_by="XM_061157898.1:177..2189"
                     /db_xref="GeneID:133066632"
ORIGIN      
        1 mptwgagsqs pdrfavsaea edtvreqlph verifrvgms vlpkdcpenp hiwlqlegpk
       61 enasrakeyl kglcspeiqn eihyppklhc iflgaqgffl dcltwstsah lvpgvpgslm
      121 vsglteafvm vqsrveelve rlswdfrlgp spgasqgagv prefsallqa rgdahteall
      181 qlpqaiqeel lslvqeasrg qgpqafpswg wgvpgplgaq qqgvrtplgd sgvsldtgpt
      241 gwqesrgerh avekegtkpg garemdlglk awlgeetwer lvafrpqsgg geagqagplk
      301 gkalgkegvp qergrlgvqg qppgtqglyq rasqlrgasl lqrlhngeas pprvpspppa
      361 peppwhcgdr gdrgdradkq lvvargrgsp wkrgtrggnl vtgtqrfqea lqdpftlcla
      421 nvpgkpdlrh ividgsnvam vhglqhyfss rgiaiavqyf wdrghrditv fvpqwrfskd
      481 skvreghflh klyslsllsl tpsrvldgkr issyddrfmv klaeetdgii vsndqfrdla
      541 eesekwmaii rerllpftfv gnlfmvpddp lgrngptlde flkkpvrapg sskpqpsarg
      601 vtehshqqqg rkeedkgngg irktreterl rrqllevfwg qdhkvdfilq repycrdinq
      661 lseallslnf
//
LOCUS       XP_061013882             670 aa            linear   MAM 02-DEC-2023
DEFINITION  protein KHNYN [Dama dama].
ACCESSION   XP_061013882
VERSION     XP_061013882.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157899.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..670
                     /product="protein KHNYN"
                     /calculated_mol_wt=73963
     Region          12..74
                     /region_name="KH-I_N4BP1_like_rpt1"
                     /note="first type I K homology (KH) RNA-binding domain
                     found in the family of NEDD4-binding protein 1 (N4BP1);
                     cd09032"
                     /db_xref="CDD:411808"
     Region          76..141
                     /region_name="KH-I_NYNRIN_like"
                     /note="type I K homology (KH) RNA-binding domain found in
                     the subfamily of NYN domain and retroviral integrase
                     catalytic domain-containing protein (NYNRIN); cd22477"
                     /db_xref="CDD:411905"
     Site            order(87,89..91,93..97,100..101,104..105,110..113)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:411905"
     Region          427..580
                     /region_name="RNase_Zc3h12a"
                     /note="Zc3h12a-like Ribonuclease NYN domain; pfam11977"
                     /db_xref="CDD:403256"
     CDS             1..670
                     /gene="KHNYN"
                     /coded_by="XM_061157899.1:130..2142"
                     /db_xref="GeneID:133066632"
ORIGIN      
        1 mptwgagsqs pdrfavsaea edtvreqlph verifrvgms vlpkdcpenp hiwlqlegpk
       61 enasrakeyl kglcspeiqn eihyppklhc iflgaqgffl dcltwstsah lvpgvpgslm
      121 vsglteafvm vqsrveelve rlswdfrlgp spgasqgagv prefsallqa rgdahteall
      181 qlpqaiqeel lslvqeasrg qgpqafpswg wgvpgplgaq qqgvrtplgd sgvsldtgpt
      241 gwqesrgerh avekegtkpg garemdlglk awlgeetwer lvafrpqsgg geagqagplk
      301 gkalgkegvp qergrlgvqg qppgtqglyq rasqlrgasl lqrlhngeas pprvpspppa
      361 peppwhcgdr gdrgdradkq lvvargrgsp wkrgtrggnl vtgtqrfqea lqdpftlcla
      421 nvpgkpdlrh ividgsnvam vhglqhyfss rgiaiavqyf wdrghrditv fvpqwrfskd
      481 skvreghflh klyslsllsl tpsrvldgkr issyddrfmv klaeetdgii vsndqfrdla
      541 eesekwmaii rerllpftfv gnlfmvpddp lgrngptlde flkkpvrapg sskpqpsarg
      601 vtehshqqqg rkeedkgngg irktreterl rrqllevfwg qdhkvdfilq repycrdinq
      661 lseallslnf
//
LOCUS       XP_061013883             294 aa            linear   MAM 02-DEC-2023
DEFINITION  epimerase family protein SDR39U1 isoform X1 [Dama dama].
ACCESSION   XP_061013883
VERSION     XP_061013883.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157900.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..294
                     /product="epimerase family protein SDR39U1 isoform X1"
                     /calculated_mol_wt=30977
     Region          2..293
                     /region_name="SDR_a8"
                     /note="atypical (a) SDRs, subgroup 8; cd05242"
                     /db_xref="CDD:187553"
     Site            order(7,9..12,31..33,58..60,81,106..108,132,136,157..160)
                     /site_type="other"
                     /note="putative NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187553"
     Site            order(82,107,132,136)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:187553"
     CDS             1..294
                     /gene="SDR39U1"
                     /coded_by="XM_061157900.1:87..971"
                     /db_xref="GeneID:133066633"
ORIGIN      
        1 mrvlvgggtg figtaltqll karghevtsi srkpgpgrit wdelttsglp rcdaavnlag
       61 enilnplrrw naafqkevls srlettqtla gaiakapepp qawvlvtgva yyqpsltaey
      121 dedspggdfd ffsnlvtkwe aaarlpgdst rqvvvrsgvv lgrgggaigh mllpfrlglg
      181 gpigsghqff pwihirdlag ilahaletsh vqgilngvap assttnaefa ralgaalgrp
      241 afiplpsavv qaifgqerav mllegqkvvp rrtlaagyqy sfpelgaalk eiia
//
LOCUS       XP_061013884             212 aa            linear   MAM 02-DEC-2023
DEFINITION  epimerase family protein SDR39U1 isoform X2 [Dama dama].
ACCESSION   XP_061013884
VERSION     XP_061013884.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157901.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..212
                     /product="epimerase family protein SDR39U1 isoform X2"
                     /calculated_mol_wt=22403
     Region          <26..211
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     CDS             1..212
                     /gene="SDR39U1"
                     /coded_by="XM_061157901.1:1..639"
                     /db_xref="GeneID:133066633"
ORIGIN      
        1 mssrrrgcpa amlqstwqer tsstlsaayy qpsltaeyde dspggdfdff snlvtkweaa
       61 arlpgdstrq vvvrsgvvlg rgggaighml lpfrlglggp igsghqffpw ihirdlagil
      121 ahaletshvq gilngvapas sttnaefara lgaalgrpaf iplpsavvqa ifgqeravml
      181 legqkvvprr tlaagyqysf pelgaalkei ia
//
LOCUS       XP_061013885             205 aa            linear   MAM 02-DEC-2023
DEFINITION  cerebellin-3 isoform X1 [Dama dama].
ACCESSION   XP_061013885
VERSION     XP_061013885.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157902.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..205
                     /product="cerebellin-3 isoform X1"
                     /calculated_mol_wt=21633
     Region          71..205
                     /region_name="C1q"
                     /note="C1q domain; cl23878"
                     /db_xref="CDD:420072"
     CDS             1..205
                     /gene="CBLN3"
                     /coded_by="XM_061157902.1:775..1392"
                     /db_xref="GeneID:133066634"
ORIGIN      
        1 mlgtkrpwpp rpslslglpl altllalrag waqegtepvl legeclvvce pgraaaggpg
       61 gaalgeappg rvafaavrsh hhepageisn gtsgaiyfdq vlvnegggfd rtsgsfvapv
      121 rgvysfrfhv vkvynrqtvq vslmlntwpv vsafandpdv treaatssvl lpldpgdrvs
      181 lrlrrgnllg gwkyssfsgf lifpl
//
LOCUS       XP_061013886             205 aa            linear   MAM 02-DEC-2023
DEFINITION  cerebellin-3 isoform X1 [Dama dama].
ACCESSION   XP_061013886
VERSION     XP_061013886.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157903.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..205
                     /product="cerebellin-3 isoform X1"
                     /calculated_mol_wt=21633
     Region          71..205
                     /region_name="C1q"
                     /note="C1q domain; cl23878"
                     /db_xref="CDD:420072"
     CDS             1..205
                     /gene="CBLN3"
                     /coded_by="XM_061157903.1:730..1347"
                     /db_xref="GeneID:133066634"
ORIGIN      
        1 mlgtkrpwpp rpslslglpl altllalrag waqegtepvl legeclvvce pgraaaggpg
       61 gaalgeappg rvafaavrsh hhepageisn gtsgaiyfdq vlvnegggfd rtsgsfvapv
      121 rgvysfrfhv vkvynrqtvq vslmlntwpv vsafandpdv treaatssvl lpldpgdrvs
      181 lrlrrgnllg gwkyssfsgf lifpl
//
LOCUS       XP_061013887             205 aa            linear   MAM 02-DEC-2023
DEFINITION  cerebellin-3 isoform X1 [Dama dama].
ACCESSION   XP_061013887
VERSION     XP_061013887.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157904.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..205
                     /product="cerebellin-3 isoform X1"
                     /calculated_mol_wt=21633
     Region          71..205
                     /region_name="C1q"
                     /note="C1q domain; cl23878"
                     /db_xref="CDD:420072"
     CDS             1..205
                     /gene="CBLN3"
                     /coded_by="XM_061157904.1:603..1220"
                     /db_xref="GeneID:133066634"
ORIGIN      
        1 mlgtkrpwpp rpslslglpl altllalrag waqegtepvl legeclvvce pgraaaggpg
       61 gaalgeappg rvafaavrsh hhepageisn gtsgaiyfdq vlvnegggfd rtsgsfvapv
      121 rgvysfrfhv vkvynrqtvq vslmlntwpv vsafandpdv treaatssvl lpldpgdrvs
      181 lrlrrgnllg gwkyssfsgf lifpl
//
LOCUS       XP_061013888             196 aa            linear   MAM 02-DEC-2023
DEFINITION  cerebellin-3 isoform X2 [Dama dama].
ACCESSION   XP_061013888
VERSION     XP_061013888.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157905.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..196
                     /product="cerebellin-3 isoform X2"
                     /calculated_mol_wt=20634
     Region          71..>178
                     /region_name="C1q"
                     /note="C1q domain; cl23878"
                     /db_xref="CDD:420072"
     CDS             1..196
                     /gene="CBLN3"
                     /coded_by="XM_061157905.1:775..1365"
                     /db_xref="GeneID:133066634"
ORIGIN      
        1 mlgtkrpwpp rpslslglpl altllalrag waqegtepvl legeclvvce pgraaaggpg
       61 gaalgeappg rvafaavrsh hhepageisn gtsgaiyfdq vlvnegggfd rtsgsfvapv
      121 rgvysfrfhv vkvynrqtvq vslmlntwpv vsafandpdv treaatssvl lpldpgdrsh
      181 llscvrlfvt pwtvar
//
LOCUS       XP_061013889             533 aa            linear   MAM 02-DEC-2023
DEFINITION  CD276 antigen [Dama dama].
ACCESSION   XP_061013889
VERSION     XP_061013889.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157906.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..533
                     /product="CD276 antigen"
                     /calculated_mol_wt=56904
     Region          31..141
                     /region_name="IgV_B7-H3"
                     /note="Immunoglobulin Variable (IgV) domain of B7-H3, a
                     member of the B7 family of immune checkpoint molecules;
                     cd20934"
                     /db_xref="CDD:409528"
     Region          31..50
                     /region_name="FR1"
                     /note="FR1 [structural motif]"
                     /db_xref="CDD:409528"
     Region          31..34
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409528"
     Region          36..40
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409528"
     Region          43..50
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409528"
     Region          51..59
                     /region_name="CDR1"
                     /note="CDR1 [structural motif]"
                     /db_xref="CDD:409528"
     Region          61..71
                     /region_name="FR2"
                     /note="FR2 [structural motif]"
                     /db_xref="CDD:409528"
     Region          61..68
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409528"
     Region          73..85
                     /region_name="CDR2"
                     /note="CDR2 [structural motif]"
                     /db_xref="CDD:409528"
     Region          74..79
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409528"
     Region          82..85
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409528"
     Region          88..126
                     /region_name="FR3"
                     /note="FR3 [structural motif]"
                     /db_xref="CDD:409528"
     Region          91..97
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409528"
     Region          103..109
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409528"
     Region          118..126
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409528"
     Region          127..129
                     /region_name="CDR3"
                     /note="CDR3 [structural motif]"
                     /db_xref="CDD:409528"
     Region          129..138
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409528"
     Region          130..141
                     /region_name="FR4"
                     /note="FR4 [structural motif]"
                     /db_xref="CDD:409528"
     Region          143..223
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          249..359
                     /region_name="IgV_B7-H3"
                     /note="Immunoglobulin Variable (IgV) domain of B7-H3, a
                     member of the B7 family of immune checkpoint molecules;
                     cd20934"
                     /db_xref="CDD:409528"
     Region          249..268
                     /region_name="FR1"
                     /note="FR1 [structural motif]"
                     /db_xref="CDD:409528"
     Region          249..252
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409528"
     Region          254..258
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409528"
     Region          261..268
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409528"
     Region          269..277
                     /region_name="CDR1"
                     /note="CDR1 [structural motif]"
                     /db_xref="CDD:409528"
     Region          279..289
                     /region_name="FR2"
                     /note="FR2 [structural motif]"
                     /db_xref="CDD:409528"
     Region          279..286
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409528"
     Region          291..303
                     /region_name="CDR2"
                     /note="CDR2 [structural motif]"
                     /db_xref="CDD:409528"
     Region          292..297
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409528"
     Region          300..303
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409528"
     Region          306..344
                     /region_name="FR3"
                     /note="FR3 [structural motif]"
                     /db_xref="CDD:409528"
     Region          309..315
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409528"
     Region          321..327
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409528"
     Region          336..344
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409528"
     Region          345..347
                     /region_name="CDR3"
                     /note="CDR3 [structural motif]"
                     /db_xref="CDD:409528"
     Region          347..356
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409528"
     Region          348..359
                     /region_name="FR4"
                     /note="FR4 [structural motif]"
                     /db_xref="CDD:409528"
     Region          361..441
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     CDS             1..533
                     /gene="CD276"
                     /coded_by="XM_061157906.1:143..1744"
                     /db_xref="GeneID:133066637"
ORIGIN      
        1 mlcgpgstgv svapalgvlw fcltgaavev qvpedpvval vgtdatlrcs fstepgfsla
       61 qlnltwqltd tkqlvhsfae grdqgsayan rtalfpdlla qgnaslrlqr vrvadegsft
      121 cfvsirdfgs aavslqvaap yskpsmtlep nkdlrpgdtv titcssyrgy peaevlwqdg
      181 qgapltdnvt tsqmaneqgl fdvhsvlrvv lgangtyscl vrnpvlqqda hgsvtitphr
      241 nptgavevqv pedpvvalvg tdatlrcsfs tepgfslaql nliwqltdtk qlvhsfaegr
      301 dqgsayanrt alfpdllaqg naslrlqrvr vadegsftcf vsirdfgsaa vslqvaapys
      361 kpsmtlepnk dlrpgdtvti tcssyrgype aevlwqdgqg apltsnvtts qmaneqglfd
      421 vhsvlrvvlg angtysclvr npvlqqdahg svtitgqpmt fppealwvtv glsiclvvll
      481 valafvcwrk ikqsceeena gaedhdgdge gsktalrplk hsenkeddgp eiv
//
LOCUS       XP_061013891             255 aa            linear   MAM 02-DEC-2023
DEFINITION  meiotic recombination protein REC114 [Dama dama].
ACCESSION   XP_061013891
VERSION     XP_061013891.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157908.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..255
                     /product="meiotic recombination protein REC114"
                     /calculated_mol_wt=27713
     Region          21..250
                     /region_name="REC114-like"
                     /note="Meiotic recombination protein REC114-like;
                     pfam15165"
                     /db_xref="CDD:464541"
     CDS             1..255
                     /gene="REC114"
                     /coded_by="XM_061157908.1:2..769"
                     /db_xref="GeneID:133066639"
ORIGIN      
        1 maeagkehag lglragdaaq wplqrygrfm psgtgeppgp gqeagmassp twkvfdssee
       61 sghlvltivi sghffisqgq tllegfslig sknwlkivrr mdcllfgtti knksrmfrvq
      121 fsggsreqal ehcyscvqnl aqyitvqvpd gisqefrpsp gqgkgcvqsi ppqygnseqq
      181 qrvpadtssp ggrtsvawla qslmaseelp lvyeqsawna qglgpflrlc lmdqnfpafv
      241 eevekelkkl tglsd
//
LOCUS       XP_061013892            1470 aa            linear   MAM 02-DEC-2023
DEFINITION  neogenin isoform X1 [Dama dama].
ACCESSION   XP_061013892
VERSION     XP_061013892.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157909.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1470
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1470
                     /product="neogenin isoform X1"
                     /calculated_mol_wt=160375
     Region          52..148
                     /region_name="IgI_1_Neogenin_like"
                     /note="First immunoglobulin (Ig)-like domain in neogenin,
                     and similar domains; member of the I-set of Ig superfamily
                     (IgSF) domains; cd05722"
                     /db_xref="CDD:409387"
     Region          52..55
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409387"
     Region          58..64
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409387"
     Region          68..78
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409387"
     Region          82..88
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409387"
     Region          90..93
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409387"
     Region          100..105
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409387"
     Region          107..113
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409387"
     Region          125..132
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409387"
     Region          137..148
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409387"
     Region          158..239
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          169..173
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          182..186
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          204..208
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          218..223
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          250..337
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          266..270
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          279..283
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          303..307
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          317..322
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          330..333
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          344..427
                     /region_name="IgI_4_Neogenin_like"
                     /note="Fourth immunoglobulin (Ig)-like domain in neogenin,
                     and similar domains; member of the I-set of Ig superfamily
                     (IgSF) domains; cd05723"
                     /db_xref="CDD:409388"
     Region          344..347
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409388"
     Region          349..353
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409388"
     Region          356..365
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409388"
     Region          370..376
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409388"
     Region          378..381
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409388"
     Region          386..390
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409388"
     Region          394..398
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409388"
     Region          406..414
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409388"
     Region          417..427
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409388"
     Region          459..552
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(459,525,540)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          <522..944
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Site            order(541..542,544..545)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          976..1071
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(1060..1061,1063..1064)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          1167..1470
                     /region_name="Neogenin_C"
                     /note="Neogenin C-terminus; pfam06583"
                     /db_xref="CDD:461954"
     CDS             1..1470
                     /gene="NEO1"
                     /coded_by="XM_061157909.1:103..4515"
                     /db_xref="GeneID:133066640"
ORIGIN      
        1 maaepgawrl lstsffwlcc llllgrpapg vaaarsgspp qssgsnirtf tpfyflvepv
       61 dtlsvrgssv ilncsaysep spkiewkkdg tllnlvsddr rqlladgslf issvvhskhn
      121 kpdegyyqcv atveslgtiv srtakltvag lprfasqpep ssvyvgnsav lncevnadlv
      181 pfmrweqnkq plllddrvik lpsgmlvisn ategdgglyr cmvesggppk yseeaelkvl
      241 pdpgatsnlv flkqpsslir vigqsavlpc vasglptpti rwmkneetvd tessgrlvll
      301 aggsleisdv teddagtyfc iadngnetie aqaeltvqaq peflkqptni yahesmdivf
      361 ecevtgkptp tvkwvkngdm vipsdyfkiv kehnlqvlgl vksdegfyqc iaendvgnaq
      421 agaqliileh dvaiptlppt sltsattdhl apattgplps aprdvvaslv strfikltwr
      481 tpasdphgdn ltysvfytke giarervent srpgemqvti qnlmpatvyi frvmaqnkhg
      541 sgessaplrv etqpevqlpg papnirayat sptsitvtwe tplsgngeiq nyklyymekg
      601 tdkeqdvdvs shshainglk kyteysfrvv aynkhgpgvs tqdvavrtfs dvpsaapqnl
      661 slevrnsksi vihwqppppa aqngqitgyk vryrkasrks dvtealvsgt qlsqliegld
      721 rgteynfrva altvngtgpa tdwlsaetfe sdldetrvpe vpsslhvrpl vtsivvswtp
      781 penqnivvrg yaigygigsp haqtikvdyk qryytienld psshyvitlk afnnvgegip
      841 lyesavtrph tdtsevdlfv inapytpvpd ptpmmppvgv qasilshdti ritwadnslp
      901 khqkitdsry ytvrwktnip antkyknana ttlsylvtgl kpntlyefsv mvtkgrrsst
      961 wsmtahgttf elvptsppkd vtvvskegkp rtiivnwqpp seangkitgy iiyystdvna
     1021 eihdwviepv vgnrlthqiq eltldtpyyf kiqarnskgm gpmseavqfr tpkasgsagk
     1081 gsrlpdlgsd ykppmsgsns phgsptspld snmllviivs vgvitivvvv iiavfctrrt
     1141 tshqkkkraa cksvngshky kgnskdvkpp dlwihherle lkpidkspdp npimtdtpip
     1201 rnsqditpvd nsmdsnihqr rnsyrghese dsmstlagrr gmrpkmmmpf dsqppqpvis
     1261 ahpihsldnp hhhfhsssla sparshlyhp gsswpigtsm slsdranste svrntpstdt
     1321 mpasssqtcc tdhqdpegat sssylassqe edsgqslpta hvrpshplks favpaipppg
     1381 pptydsalps tpllsqqaln hhihavktas igtlgrsrpp mpvvvpsape vqettrmled
     1441 sessyepdel tkemahlegl mkdlnaitta
//
LOCUS       XP_061013893            1454 aa            linear   MAM 02-DEC-2023
DEFINITION  neogenin isoform X2 [Dama dama].
ACCESSION   XP_061013893
VERSION     XP_061013893.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157910.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1454
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1454
                     /product="neogenin isoform X2"
                     /calculated_mol_wt=158612
     Region          52..148
                     /region_name="IgI_1_Neogenin_like"
                     /note="First immunoglobulin (Ig)-like domain in neogenin,
                     and similar domains; member of the I-set of Ig superfamily
                     (IgSF) domains; cd05722"
                     /db_xref="CDD:409387"
     Region          52..55
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409387"
     Region          58..64
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409387"
     Region          68..78
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409387"
     Region          82..88
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409387"
     Region          90..93
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409387"
     Region          100..105
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409387"
     Region          107..113
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409387"
     Region          125..132
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409387"
     Region          137..148
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409387"
     Region          158..239
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          169..173
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          182..186
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          204..208
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          218..223
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          250..337
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          266..270
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          279..283
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          303..307
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          317..322
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          330..333
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          344..427
                     /region_name="IgI_4_Neogenin_like"
                     /note="Fourth immunoglobulin (Ig)-like domain in neogenin,
                     and similar domains; member of the I-set of Ig superfamily
                     (IgSF) domains; cd05723"
                     /db_xref="CDD:409388"
     Region          344..347
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409388"
     Region          349..353
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409388"
     Region          356..365
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409388"
     Region          370..376
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409388"
     Region          378..381
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409388"
     Region          386..390
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409388"
     Region          394..398
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409388"
     Region          406..414
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409388"
     Region          417..427
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409388"
     Region          459..552
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(459,525,540)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          <522..928
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Site            order(541..542,544..545)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          960..1055
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(1044..1045,1047..1048)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          1151..1454
                     /region_name="Neogenin_C"
                     /note="Neogenin C-terminus; pfam06583"
                     /db_xref="CDD:461954"
     CDS             1..1454
                     /gene="NEO1"
                     /coded_by="XM_061157910.1:102..4466"
                     /db_xref="GeneID:133066640"
ORIGIN      
        1 maaepgawrl lstsffwlcc llllgrpapg vaaarsgspp qssgsnirtf tpfyflvepv
       61 dtlsvrgssv ilncsaysep spkiewkkdg tllnlvsddr rqlladgslf issvvhskhn
      121 kpdegyyqcv atveslgtiv srtakltvag lprfasqpep ssvyvgnsav lncevnadlv
      181 pfmrweqnkq plllddrvik lpsgmlvisn ategdgglyr cmvesggppk yseeaelkvl
      241 pdpgatsnlv flkqpsslir vigqsavlpc vasglptpti rwmkneetvd tessgrlvll
      301 aggsleisdv teddagtyfc iadngnetie aqaeltvqaq peflkqptni yahesmdivf
      361 ecevtgkptp tvkwvkngdm vipsdyfkiv kehnlqvlgl vksdegfyqc iaendvgnaq
      421 agaqliileh dvaiptlppt sltsattdhl apattgplps aprdvvaslv strfikltwr
      481 tpasdphgdn ltysvfytke giarervent srpgemqvti qnlmpatvyi frvmaqnkhg
      541 sgessaplrv etqpevqlpg papnirayat sptsitvtwe tplsgngeiq nyklyymekg
      601 tdkeqdvdvs shshainglk kyteysfrvv aynkhgpgvs tqdvavrtfs dvpsaapqnl
      661 slevrnsksi vihwqppppa aqngqitgyk vryrkasrks dvtealvsgt qlsqliegld
      721 rgteynfrva altvngtgpa tdwlsaetfe sdldetrvpe vpsslhvrpl vtsivvswtp
      781 penqnivvrg yaigygigsp haqtikvdyk qryytienld psshyvitlk afnnvgegip
      841 lyesavtrph tvpdptpmmp pvgvqasils hdtiritwad nslpkhqkit dsryytvrwk
      901 tnipantkyk nanattlsyl vtglkpntly efsvmvtkgr rsstwsmtah gttfelvpts
      961 ppkdvtvvsk egkprtiivn wqppseangk itgyiiyyst dvnaeihdwv iepvvgnrlt
     1021 hqiqeltldt pyyfkiqarn skgmgpmsea vqfrtpkasg sagkgsrlpd lgsdykppms
     1081 gsnsphgspt spldsnmllv iivsvgviti vvvviiavfc trrttshqkk kraacksvng
     1141 shkykgnskd vkppdlwihh erlelkpidk spdpnpimtd tpiprnsqdi tpvdnsmdsn
     1201 ihqrrnsyrg hesedsmstl agrrgmrpkm mmpfdsqppq pvisahpihs ldnphhhfhs
     1261 sslasparsh lyhpgsswpi gtsmslsdra nstesvrntp stdtmpasss qtcctdhqdp
     1321 egatsssyla ssqeedsgqs lptahvrpsh plksfavpai pppgpptyds alpstpllsq
     1381 qalnhhihav ktasigtlgr srppmpvvvp sapevqettr mledsessye pdeltkemah
     1441 leglmkdlna itta
//
LOCUS       XP_061013894            1450 aa            linear   MAM 02-DEC-2023
DEFINITION  neogenin isoform X3 [Dama dama].
ACCESSION   XP_061013894
VERSION     XP_061013894.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157911.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1450
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1450
                     /product="neogenin isoform X3"
                     /calculated_mol_wt=158342
     Region          52..148
                     /region_name="IgI_1_Neogenin_like"
                     /note="First immunoglobulin (Ig)-like domain in neogenin,
                     and similar domains; member of the I-set of Ig superfamily
                     (IgSF) domains; cd05722"
                     /db_xref="CDD:409387"
     Region          52..55
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409387"
     Region          58..64
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409387"
     Region          68..78
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409387"
     Region          82..88
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409387"
     Region          90..93
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409387"
     Region          100..105
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409387"
     Region          107..113
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409387"
     Region          125..132
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409387"
     Region          137..148
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409387"
     Region          158..239
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          169..173
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          182..186
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          204..208
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          218..223
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          250..337
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          266..270
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          279..283
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          303..307
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          317..322
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          330..333
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          344..427
                     /region_name="IgI_4_Neogenin_like"
                     /note="Fourth immunoglobulin (Ig)-like domain in neogenin,
                     and similar domains; member of the I-set of Ig superfamily
                     (IgSF) domains; cd05723"
                     /db_xref="CDD:409388"
     Region          344..347
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409388"
     Region          349..353
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409388"
     Region          356..365
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409388"
     Region          370..376
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409388"
     Region          378..381
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409388"
     Region          386..390
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409388"
     Region          394..398
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409388"
     Region          406..414
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409388"
     Region          417..427
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409388"
     Region          439..532
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(439,505,520)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          <502..924
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Site            order(521..522,524..525)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          956..1051
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(1040..1041,1043..1044)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          1147..1450
                     /region_name="Neogenin_C"
                     /note="Neogenin C-terminus; pfam06583"
                     /db_xref="CDD:461954"
     CDS             1..1450
                     /gene="NEO1"
                     /coded_by="XM_061157911.1:103..4455"
                     /db_xref="GeneID:133066640"
ORIGIN      
        1 maaepgawrl lstsffwlcc llllgrpapg vaaarsgspp qssgsnirtf tpfyflvepv
       61 dtlsvrgssv ilncsaysep spkiewkkdg tllnlvsddr rqlladgslf issvvhskhn
      121 kpdegyyqcv atveslgtiv srtakltvag lprfasqpep ssvyvgnsav lncevnadlv
      181 pfmrweqnkq plllddrvik lpsgmlvisn ategdgglyr cmvesggppk yseeaelkvl
      241 pdpgatsnlv flkqpsslir vigqsavlpc vasglptpti rwmkneetvd tessgrlvll
      301 aggsleisdv teddagtyfc iadngnetie aqaeltvqaq peflkqptni yahesmdivf
      361 ecevtgkptp tvkwvkngdm vipsdyfkiv kehnlqvlgl vksdegfyqc iaendvgnaq
      421 agaqliileh apattgplps aprdvvaslv strfikltwr tpasdphgdn ltysvfytke
      481 giarervent srpgemqvti qnlmpatvyi frvmaqnkhg sgessaplrv etqpevqlpg
      541 papnirayat sptsitvtwe tplsgngeiq nyklyymekg tdkeqdvdvs shshainglk
      601 kyteysfrvv aynkhgpgvs tqdvavrtfs dvpsaapqnl slevrnsksi vihwqppppa
      661 aqngqitgyk vryrkasrks dvtealvsgt qlsqliegld rgteynfrva altvngtgpa
      721 tdwlsaetfe sdldetrvpe vpsslhvrpl vtsivvswtp penqnivvrg yaigygigsp
      781 haqtikvdyk qryytienld psshyvitlk afnnvgegip lyesavtrph tdtsevdlfv
      841 inapytpvpd ptpmmppvgv qasilshdti ritwadnslp khqkitdsry ytvrwktnip
      901 antkyknana ttlsylvtgl kpntlyefsv mvtkgrrsst wsmtahgttf elvptsppkd
      961 vtvvskegkp rtiivnwqpp seangkitgy iiyystdvna eihdwviepv vgnrlthqiq
     1021 eltldtpyyf kiqarnskgm gpmseavqfr tpkasgsagk gsrlpdlgsd ykppmsgsns
     1081 phgsptspld snmllviivs vgvitivvvv iiavfctrrt tshqkkkraa cksvngshky
     1141 kgnskdvkpp dlwihherle lkpidkspdp npimtdtpip rnsqditpvd nsmdsnihqr
     1201 rnsyrghese dsmstlagrr gmrpkmmmpf dsqppqpvis ahpihsldnp hhhfhsssla
     1261 sparshlyhp gsswpigtsm slsdranste svrntpstdt mpasssqtcc tdhqdpegat
     1321 sssylassqe edsgqslpta hvrpshplks favpaipppg pptydsalps tpllsqqaln
     1381 hhihavktas igtlgrsrpp mpvvvpsape vqettrmled sessyepdel tkemahlegl
     1441 mkdlnaitta
//
LOCUS       XP_061013895            1417 aa            linear   MAM 02-DEC-2023
DEFINITION  neogenin isoform X4 [Dama dama].
ACCESSION   XP_061013895
VERSION     XP_061013895.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157912.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1417
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1417
                     /product="neogenin isoform X4"
                     /calculated_mol_wt=154671
     Region          52..148
                     /region_name="IgI_1_Neogenin_like"
                     /note="First immunoglobulin (Ig)-like domain in neogenin,
                     and similar domains; member of the I-set of Ig superfamily
                     (IgSF) domains; cd05722"
                     /db_xref="CDD:409387"
     Region          52..55
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409387"
     Region          58..64
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409387"
     Region          68..78
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409387"
     Region          82..88
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409387"
     Region          90..93
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409387"
     Region          100..105
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409387"
     Region          107..113
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409387"
     Region          125..132
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409387"
     Region          137..148
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409387"
     Region          158..239
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          169..173
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          182..186
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          204..208
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          218..223
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          250..337
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          266..270
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          279..283
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          303..307
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          317..322
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          330..333
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          344..427
                     /region_name="IgI_4_Neogenin_like"
                     /note="Fourth immunoglobulin (Ig)-like domain in neogenin,
                     and similar domains; member of the I-set of Ig superfamily
                     (IgSF) domains; cd05723"
                     /db_xref="CDD:409388"
     Region          344..347
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409388"
     Region          349..353
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409388"
     Region          356..365
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409388"
     Region          370..376
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409388"
     Region          378..381
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409388"
     Region          386..390
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409388"
     Region          394..398
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409388"
     Region          406..414
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409388"
     Region          417..427
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409388"
     Region          459..552
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(459,525,540)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          <522..944
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Site            order(541..542,544..545)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          976..1071
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(1060..1061,1063..1064)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          1167..1417
                     /region_name="Neogenin_C"
                     /note="Neogenin C-terminus; pfam06583"
                     /db_xref="CDD:461954"
     CDS             1..1417
                     /gene="NEO1"
                     /coded_by="XM_061157912.1:104..4357"
                     /db_xref="GeneID:133066640"
ORIGIN      
        1 maaepgawrl lstsffwlcc llllgrpapg vaaarsgspp qssgsnirtf tpfyflvepv
       61 dtlsvrgssv ilncsaysep spkiewkkdg tllnlvsddr rqlladgslf issvvhskhn
      121 kpdegyyqcv atveslgtiv srtakltvag lprfasqpep ssvyvgnsav lncevnadlv
      181 pfmrweqnkq plllddrvik lpsgmlvisn ategdgglyr cmvesggppk yseeaelkvl
      241 pdpgatsnlv flkqpsslir vigqsavlpc vasglptpti rwmkneetvd tessgrlvll
      301 aggsleisdv teddagtyfc iadngnetie aqaeltvqaq peflkqptni yahesmdivf
      361 ecevtgkptp tvkwvkngdm vipsdyfkiv kehnlqvlgl vksdegfyqc iaendvgnaq
      421 agaqliileh dvaiptlppt sltsattdhl apattgplps aprdvvaslv strfikltwr
      481 tpasdphgdn ltysvfytke giarervent srpgemqvti qnlmpatvyi frvmaqnkhg
      541 sgessaplrv etqpevqlpg papnirayat sptsitvtwe tplsgngeiq nyklyymekg
      601 tdkeqdvdvs shshainglk kyteysfrvv aynkhgpgvs tqdvavrtfs dvpsaapqnl
      661 slevrnsksi vihwqppppa aqngqitgyk vryrkasrks dvtealvsgt qlsqliegld
      721 rgteynfrva altvngtgpa tdwlsaetfe sdldetrvpe vpsslhvrpl vtsivvswtp
      781 penqnivvrg yaigygigsp haqtikvdyk qryytienld psshyvitlk afnnvgegip
      841 lyesavtrph tdtsevdlfv inapytpvpd ptpmmppvgv qasilshdti ritwadnslp
      901 khqkitdsry ytvrwktnip antkyknana ttlsylvtgl kpntlyefsv mvtkgrrsst
      961 wsmtahgttf elvptsppkd vtvvskegkp rtiivnwqpp seangkitgy iiyystdvna
     1021 eihdwviepv vgnrlthqiq eltldtpyyf kiqarnskgm gpmseavqfr tpkasgsagk
     1081 gsrlpdlgsd ykppmsgsns phgsptspld snmllviivs vgvitivvvv iiavfctrrt
     1141 tshqkkkraa cksvngshky kgnskdvkpp dlwihherle lkpidkspdp npimtdtpip
     1201 rnsqditpvd nsmdsnihqr rnsyrghese dsmstlagrr gmrpkmmmpf dsqppqqsvr
     1261 ntpstdtmpa sssqtcctdh qdpegatsss ylassqeeds gqslptahvr pshplksfav
     1321 paipppgppt ydsalpstpl lsqqalnhhi havktasigt lgrsrppmpv vvpsapevqe
     1381 ttrmledses syepdeltke mahleglmkd lnaitta
//
LOCUS       XP_061013896            1397 aa            linear   MAM 02-DEC-2023
DEFINITION  neogenin isoform X5 [Dama dama].
ACCESSION   XP_061013896
VERSION     XP_061013896.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157913.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1397
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1397
                     /product="neogenin isoform X5"
                     /calculated_mol_wt=152639
     Region          52..148
                     /region_name="IgI_1_Neogenin_like"
                     /note="First immunoglobulin (Ig)-like domain in neogenin,
                     and similar domains; member of the I-set of Ig superfamily
                     (IgSF) domains; cd05722"
                     /db_xref="CDD:409387"
     Region          52..55
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409387"
     Region          58..64
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409387"
     Region          68..78
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409387"
     Region          82..88
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409387"
     Region          90..93
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409387"
     Region          100..105
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409387"
     Region          107..113
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409387"
     Region          125..132
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409387"
     Region          137..148
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409387"
     Region          158..239
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          169..173
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          182..186
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          204..208
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          218..223
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          250..337
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          266..270
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          279..283
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          303..307
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          317..322
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          330..333
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          344..427
                     /region_name="IgI_4_Neogenin_like"
                     /note="Fourth immunoglobulin (Ig)-like domain in neogenin,
                     and similar domains; member of the I-set of Ig superfamily
                     (IgSF) domains; cd05723"
                     /db_xref="CDD:409388"
     Region          344..347
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409388"
     Region          349..353
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409388"
     Region          356..365
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409388"
     Region          370..376
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409388"
     Region          378..381
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409388"
     Region          386..390
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409388"
     Region          394..398
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409388"
     Region          406..414
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409388"
     Region          417..427
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409388"
     Region          439..532
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(439,505,520)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          <502..924
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Site            order(521..522,524..525)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          956..1051
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(1040..1041,1043..1044)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          1147..1397
                     /region_name="Neogenin_C"
                     /note="Neogenin C-terminus; pfam06583"
                     /db_xref="CDD:461954"
     CDS             1..1397
                     /gene="NEO1"
                     /coded_by="XM_061157913.1:104..4297"
                     /db_xref="GeneID:133066640"
ORIGIN      
        1 maaepgawrl lstsffwlcc llllgrpapg vaaarsgspp qssgsnirtf tpfyflvepv
       61 dtlsvrgssv ilncsaysep spkiewkkdg tllnlvsddr rqlladgslf issvvhskhn
      121 kpdegyyqcv atveslgtiv srtakltvag lprfasqpep ssvyvgnsav lncevnadlv
      181 pfmrweqnkq plllddrvik lpsgmlvisn ategdgglyr cmvesggppk yseeaelkvl
      241 pdpgatsnlv flkqpsslir vigqsavlpc vasglptpti rwmkneetvd tessgrlvll
      301 aggsleisdv teddagtyfc iadngnetie aqaeltvqaq peflkqptni yahesmdivf
      361 ecevtgkptp tvkwvkngdm vipsdyfkiv kehnlqvlgl vksdegfyqc iaendvgnaq
      421 agaqliileh apattgplps aprdvvaslv strfikltwr tpasdphgdn ltysvfytke
      481 giarervent srpgemqvti qnlmpatvyi frvmaqnkhg sgessaplrv etqpevqlpg
      541 papnirayat sptsitvtwe tplsgngeiq nyklyymekg tdkeqdvdvs shshainglk
      601 kyteysfrvv aynkhgpgvs tqdvavrtfs dvpsaapqnl slevrnsksi vihwqppppa
      661 aqngqitgyk vryrkasrks dvtealvsgt qlsqliegld rgteynfrva altvngtgpa
      721 tdwlsaetfe sdldetrvpe vpsslhvrpl vtsivvswtp penqnivvrg yaigygigsp
      781 haqtikvdyk qryytienld psshyvitlk afnnvgegip lyesavtrph tdtsevdlfv
      841 inapytpvpd ptpmmppvgv qasilshdti ritwadnslp khqkitdsry ytvrwktnip
      901 antkyknana ttlsylvtgl kpntlyefsv mvtkgrrsst wsmtahgttf elvptsppkd
      961 vtvvskegkp rtiivnwqpp seangkitgy iiyystdvna eihdwviepv vgnrlthqiq
     1021 eltldtpyyf kiqarnskgm gpmseavqfr tpkasgsagk gsrlpdlgsd ykppmsgsns
     1081 phgsptspld snmllviivs vgvitivvvv iiavfctrrt tshqkkkraa cksvngshky
     1141 kgnskdvkpp dlwihherle lkpidkspdp npimtdtpip rnsqditpvd nsmdsnihqr
     1201 rnsyrghese dsmstlagrr gmrpkmmmpf dsqppqqsvr ntpstdtmpa sssqtcctdh
     1261 qdpegatsss ylassqeeds gqslptahvr pshplksfav paipppgppt ydsalpstpl
     1321 lsqqalnhhi havktasigt lgrsrppmpv vvpsapevqe ttrmledses syepdeltke
     1381 mahleglmkd lnaitta
//
LOCUS       XP_061013897             525 aa            linear   MAM 02-DEC-2023
DEFINITION  ADP-dependent glucokinase isoform X1 [Dama dama].
ACCESSION   XP_061013897
VERSION     XP_061013897.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157914.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..525
                     /product="ADP-dependent glucokinase isoform X1"
                     /calculated_mol_wt=56681
     Region          60..520
                     /region_name="ADPGK_ADPPFK"
                     /note="ADP-dependent glucokinase (ADPGK) and
                     phosphofructokinase (ADPPFK). ADPGK and ADPPFK are
                     proteins that rely on ADP rather than ATP to donate a
                     phosphoryl group. They are found in certain
                     hyperthermophilic archaea and in higher eukaryotes. A
                     functional...; cd01938"
                     /db_xref="CDD:238913"
     Site            order(83..85,157..158,202..205,234..237)
                     /site_type="active"
                     /note="intradomain hinge region [active]"
                     /db_xref="CDD:238913"
     Site            order(84,88,130,158..159,207,505,509)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238913"
     Site            order(159,297,353,356,509)
                     /site_type="other"
                     /note="Mg2+ binding site [ion binding]"
                     /db_xref="CDD:238913"
     Site            order(353,410..411,496,498,501,507..508,511)
                     /site_type="other"
                     /note="ADP binding site [chemical binding]"
                     /db_xref="CDD:238913"
     CDS             1..525
                     /gene="ADPGK"
                     /coded_by="XM_061157914.1:62..1639"
                     /db_xref="GeneID:133066641"
ORIGIN      
        1 malwrgsaya gflalavgcv fllepqlpgs alrslwsslq lgpapappga gspegrlaaa
       61 wdalivrpar rwrrvavgvn acvdvvlsgv kllralglsp gngkdhselr srndleeafv
      121 hfmgkgaaae rffsdketfh diaqiasefp eaqhyvggna aligqkfaan sdlkvllcgp
      181 vgpklhelld dnvfvppesl qevdefhlil eyqageewdq lkaphanrfi fshdlsngam
      241 nmlevfvssl eefqpdlvvl sglhmmegqs kefqrkrlle vvtslsdipt gvpvhlelas
      301 mtnkelmsni mhqsfsasgs fprshfftsg gesigasasi ltvfpavtsl glneqellfl
      361 sqsasgphss lsswngvpdv gvvsdilfwi lkehgksesr asdlsrihfh tlayhilatv
      421 dghwanqlaa vaagarvagt qacatetidt rrvslkaphe fmtsrleags rvvlnpsepv
      481 vawhregvsf hftpvlvckd pvrtvglgda isaeglfyse vhphl
//
LOCUS       XP_061013898             497 aa            linear   MAM 02-DEC-2023
DEFINITION  ADP-dependent glucokinase isoform X2 [Dama dama].
ACCESSION   XP_061013898
VERSION     XP_061013898.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157915.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..497
                     /product="ADP-dependent glucokinase isoform X2"
                     /calculated_mol_wt=53934
     Region          60..492
                     /region_name="ADPGK_ADPPFK"
                     /note="ADP-dependent glucokinase (ADPGK) and
                     phosphofructokinase (ADPPFK). ADPGK and ADPPFK are
                     proteins that rely on ADP rather than ATP to donate a
                     phosphoryl group. They are found in certain
                     hyperthermophilic archaea and in higher eukaryotes. A
                     functional...; cd01938"
                     /db_xref="CDD:238913"
     Site            order(83..85,157..158,202..205,234..237)
                     /site_type="active"
                     /note="intradomain hinge region [active]"
                     /db_xref="CDD:238913"
     Site            order(84,88,130,158..159,207,477,481)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238913"
     Site            order(159,297,325,328,481)
                     /site_type="other"
                     /note="Mg2+ binding site [ion binding]"
                     /db_xref="CDD:238913"
     Site            order(325,382..383,468,470,473,479..480,483)
                     /site_type="other"
                     /note="ADP binding site [chemical binding]"
                     /db_xref="CDD:238913"
     CDS             1..497
                     /gene="ADPGK"
                     /coded_by="XM_061157915.1:61..1554"
                     /db_xref="GeneID:133066641"
ORIGIN      
        1 malwrgsaya gflalavgcv fllepqlpgs alrslwsslq lgpapappga gspegrlaaa
       61 wdalivrpar rwrrvavgvn acvdvvlsgv kllralglsp gngkdhselr srndleeafv
      121 hfmgkgaaae rffsdketfh diaqiasefp eaqhyvggna aligqkfaan sdlkvllcgp
      181 vgpklhelld dnvfvppesl qevdefhlil eyqageewdq lkaphanrfi fshdlsngam
      241 nmlevfvssl eefqpdlvvl sglhmmegqs kefqrkrlle vvtslsdipt gvpvhlelas
      301 mtnkelmsni mhqqvfpavt slglneqell flsqsasgph sslsswngvp dvgvvsdilf
      361 wilkehgkse srasdlsrih fhtlayhila tvdghwanql aavaagarva gtqacateti
      421 dtrrvslkap hefmtsrlea gsrvvlnpse pvvawhregv sfhftpvlvc kdpvrtvglg
      481 daisaeglfy sevhphl
//
LOCUS       XP_061013899             496 aa            linear   MAM 02-DEC-2023
DEFINITION  ADP-dependent glucokinase isoform X3 [Dama dama].
ACCESSION   XP_061013899
VERSION     XP_061013899.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157916.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..496
                     /product="ADP-dependent glucokinase isoform X3"
                     /calculated_mol_wt=53806
     Region          60..491
                     /region_name="ADPGK_ADPPFK"
                     /note="ADP-dependent glucokinase (ADPGK) and
                     phosphofructokinase (ADPPFK). ADPGK and ADPPFK are
                     proteins that rely on ADP rather than ATP to donate a
                     phosphoryl group. They are found in certain
                     hyperthermophilic archaea and in higher eukaryotes. A
                     functional...; cd01938"
                     /db_xref="CDD:238913"
     Site            order(83..85,157..158,202..205,234..237)
                     /site_type="active"
                     /note="intradomain hinge region [active]"
                     /db_xref="CDD:238913"
     Site            order(84,88,130,158..159,207,476,480)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238913"
     Site            order(159,297,324,327,480)
                     /site_type="other"
                     /note="Mg2+ binding site [ion binding]"
                     /db_xref="CDD:238913"
     Site            order(324,381..382,467,469,472,478..479,482)
                     /site_type="other"
                     /note="ADP binding site [chemical binding]"
                     /db_xref="CDD:238913"
     CDS             1..496
                     /gene="ADPGK"
                     /coded_by="XM_061157916.1:62..1552"
                     /db_xref="GeneID:133066641"
ORIGIN      
        1 malwrgsaya gflalavgcv fllepqlpgs alrslwsslq lgpapappga gspegrlaaa
       61 wdalivrpar rwrrvavgvn acvdvvlsgv kllralglsp gngkdhselr srndleeafv
      121 hfmgkgaaae rffsdketfh diaqiasefp eaqhyvggna aligqkfaan sdlkvllcgp
      181 vgpklhelld dnvfvppesl qevdefhlil eyqageewdq lkaphanrfi fshdlsngam
      241 nmlevfvssl eefqpdlvvl sglhmmegqs kefqrkrlle vvtslsdipt gvpvhlelas
      301 mtnkelmsni mhqvfpavts lglneqellf lsqsasgphs slsswngvpd vgvvsdilfw
      361 ilkehgkses rasdlsrihf htlayhilat vdghwanqla avaagarvag tqacatetid
      421 trrvslkaph efmtsrleag srvvlnpsep vvawhregvs fhftpvlvck dpvrtvglgd
      481 aisaeglfys evhphl
//
LOCUS       XP_061013900             428 aa            linear   MAM 02-DEC-2023
DEFINITION  ADP-dependent glucokinase isoform X4 [Dama dama].
ACCESSION   XP_061013900
VERSION     XP_061013900.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157917.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..428
                     /product="ADP-dependent glucokinase isoform X4"
                     /calculated_mol_wt=46340
     Region          60..>320
                     /region_name="ribokinase_pfkB_like"
                     /note="ribokinase/pfkB superfamily: Kinases that accept a
                     wide variety of substrates, including carbohydrates and
                     aromatic small molecules, all are phosphorylated at a
                     hydroxyl group. The superfamily includes ribokinase,
                     fructokinase, ketohexokinase; cl00192"
                     /db_xref="CDD:469648"
     CDS             1..428
                     /gene="ADPGK"
                     /coded_by="XM_061157917.1:62..1348"
                     /db_xref="GeneID:133066641"
ORIGIN      
        1 malwrgsaya gflalavgcv fllepqlpgs alrslwsslq lgpapappga gspegrlaaa
       61 wdalivrpar rwrrvavgvn acvdvvlsgv kllralglsp gngkdhselr srndleeafv
      121 hfmgkgaaae rffsdketfh diaqiasefp eaqhyvggna aligqkfaan sdlkvllcgp
      181 vgpklhelld dnvfvppesl qevdefhlil eyqageewdq lkaphanrfi fshdlsngam
      241 nmlevfvssl eefqpdlvvl sglhmmegqs kefqrkrlle vvtslsdipt gvpvhlelas
      301 mtnkelmsni mhqsfsasgs fprshfftsg gesigasasi lthvevgsec llqwnpkekt
      361 knptpvlsae lqeaqrkeiw gtlhslvirp pgvqpldsnn dqisprvgcl gaqilktrig
      421 mpalpatl
//
LOCUS       XP_061013901             419 aa            linear   MAM 02-DEC-2023
DEFINITION  ADP-dependent glucokinase isoform X5 [Dama dama].
ACCESSION   XP_061013901
VERSION     XP_061013901.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157918.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..419
                     /product="ADP-dependent glucokinase isoform X5"
                     /calculated_mol_wt=44551
     Region          60..414
                     /region_name="ribokinase_pfkB_like"
                     /note="ribokinase/pfkB superfamily: Kinases that accept a
                     wide variety of substrates, including carbohydrates and
                     aromatic small molecules, all are phosphorylated at a
                     hydroxyl group. The superfamily includes ribokinase,
                     fructokinase, ketohexokinase; cl00192"
                     /db_xref="CDD:469648"
     Site            order(162,400,403)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238177"
     Site            order(247,304,398,401..402,405)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:238177"
     CDS             1..419
                     /gene="ADPGK"
                     /coded_by="XM_061157918.1:62..1321"
                     /db_xref="GeneID:133066641"
ORIGIN      
        1 malwrgsaya gflalavgcv fllepqlpgs alrslwsslq lgpapappga gspegrlaaa
       61 wdalivrpar rwrrvavgvn acvdvvlsgv kllralglsp gngkdhselr srndleeafv
      121 hfmgkgaaae rffsdketfh diaqiasefp eaqhyvggna aligqkfaan sdlkvvtsls
      181 diptgvpvhl elasmtnkel msnimhqsfs asgsfprshf ftsggesiga sasiltvfpa
      241 vtslglneqe llflsqsasg phsslsswng vpdvgvvsdi lfwilkehgk sesrasdlsr
      301 ihfhtlayhi latvdghwan qlaavaagar vagtqacate tidtrrvslk aphefmtsrl
      361 eagsrvvlnp sepvvawhre gvsfhftpvl vckdpvrtvg lgdaisaegl fysevhphl
//
LOCUS       XP_061013902             391 aa            linear   MAM 02-DEC-2023
DEFINITION  ADP-dependent glucokinase isoform X6 [Dama dama].
ACCESSION   XP_061013902
VERSION     XP_061013902.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157919.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..391
                     /product="ADP-dependent glucokinase isoform X6"
                     /calculated_mol_wt=41804
     Region          60..386
                     /region_name="ribokinase_pfkB_like"
                     /note="ribokinase/pfkB superfamily: Kinases that accept a
                     wide variety of substrates, including carbohydrates and
                     aromatic small molecules, all are phosphorylated at a
                     hydroxyl group. The superfamily includes ribokinase,
                     fructokinase, ketohexokinase; cl00192"
                     /db_xref="CDD:469648"
     Site            order(162,372,375)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238177"
     Site            order(219,276,370,373..374,377)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:238177"
     CDS             1..391
                     /gene="ADPGK"
                     /coded_by="XM_061157919.1:62..1237"
                     /db_xref="GeneID:133066641"
ORIGIN      
        1 malwrgsaya gflalavgcv fllepqlpgs alrslwsslq lgpapappga gspegrlaaa
       61 wdalivrpar rwrrvavgvn acvdvvlsgv kllralglsp gngkdhselr srndleeafv
      121 hfmgkgaaae rffsdketfh diaqiasefp eaqhyvggna aligqkfaan sdlkvvtsls
      181 diptgvpvhl elasmtnkel msnimhqqvf pavtslglne qellflsqsa sgphsslssw
      241 ngvpdvgvvs dilfwilkeh gksesrasdl srihfhtlay hilatvdghw anqlaavaag
      301 arvagtqaca tetidtrrvs lkaphefmts rleagsrvvl npsepvvawh regvsfhftp
      361 vlvckdpvrt vglgdaisae glfysevhph l
//
LOCUS       XP_061013903             390 aa            linear   MAM 02-DEC-2023
DEFINITION  ADP-dependent glucokinase isoform X7 [Dama dama].
ACCESSION   XP_061013903
VERSION     XP_061013903.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157920.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..390
                     /product="ADP-dependent glucokinase isoform X7"
                     /calculated_mol_wt=41676
     Region          60..385
                     /region_name="ribokinase_pfkB_like"
                     /note="ribokinase/pfkB superfamily: Kinases that accept a
                     wide variety of substrates, including carbohydrates and
                     aromatic small molecules, all are phosphorylated at a
                     hydroxyl group. The superfamily includes ribokinase,
                     fructokinase, ketohexokinase; cl00192"
                     /db_xref="CDD:469648"
     Site            order(162,371,374)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238177"
     Site            order(218,275,369,372..373,376)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:238177"
     CDS             1..390
                     /gene="ADPGK"
                     /coded_by="XM_061157920.1:62..1234"
                     /db_xref="GeneID:133066641"
ORIGIN      
        1 malwrgsaya gflalavgcv fllepqlpgs alrslwsslq lgpapappga gspegrlaaa
       61 wdalivrpar rwrrvavgvn acvdvvlsgv kllralglsp gngkdhselr srndleeafv
      121 hfmgkgaaae rffsdketfh diaqiasefp eaqhyvggna aligqkfaan sdlkvvtsls
      181 diptgvpvhl elasmtnkel msnimhqvfp avtslglneq ellflsqsas gphsslsswn
      241 gvpdvgvvsd ilfwilkehg ksesrasdls rihfhtlayh ilatvdghwa nqlaavaaga
      301 rvagtqacat etidtrrvsl kaphefmtsr leagsrvvln psepvvawhr egvsfhftpv
      361 lvckdpvrtv glgdaisaeg lfysevhphl
//
LOCUS       XP_061013905             555 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase ARIH1 isoform X1 [Dama dama].
ACCESSION   XP_061013905
VERSION     XP_061013905.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157922.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..555
                     /product="E3 ubiquitin-protein ligase ARIH1 isoform X1"
                     /calculated_mol_wt=63886
     Region          182..240
                     /region_name="RING-HC_RBR_HHARI"
                     /note="RING finger, HC subclass, found in human homolog of
                     Drosophila ariadne (HHARI) and similar proteins; cd16626"
                     /db_xref="CDD:438288"
     Region          249..330
                     /region_name="BRcat_RBR_HHARI-like"
                     /note="BRcat domain found in human homolog of Drosophila
                     Ariadne (HHARI) and similar proteins; cd20343"
                     /db_xref="CDD:439004"
     Region          334..391
                     /region_name="Rcat_RBR_HHARI-like"
                     /note="Rcat domain found in human homolog of Drosophila
                     Ariadne (HHARI) and similar proteins; cd20356"
                     /db_xref="CDD:439017"
     Region          392..>523
                     /region_name="Ariadne"
                     /note="Ariadne domain; pfam19422"
                     /db_xref="CDD:466073"
     CDS             1..555
                     /gene="ARIH1"
                     /coded_by="XM_061157922.1:151..1818"
                     /db_xref="GeneID:133066643"
ORIGIN      
        1 mdsdegynye fdedeecsee dsgaeeeede dddepdddnl dlgevelvep glgvggerdg
       61 llcgetgggg gsalgpgggg ggggggggpg heqeedyrye vltaeqilqh mvecirevne
      121 viqnpatitr illshfnwdk eklmeryfdg nleklfaech vinpskksrt rqmntrssaq
      181 dmpcqicyln ypnsyftgle cghkfcmqcw seylttkime egmgqtiscp ahgcdilvdd
      241 ntvmrlitds kvklkyqhli tnsfvecnrl lkwcpapdch hvvkvqypda kpvrckcgrq
      301 fcfncgenwh dpvkckwlkk wikkcdddse tsnwiaantk ecpkchvtie kdggcnhmvc
      361 rnqnckaefc wvclgpweph gsawyncnry neddakaard aqersraalq rylfycnrym
      421 nhmqslrfeh klyaqvkqkm eemqqhnmsw ievqflkkav dvlcqcratl mytyvfafyl
      481 kknnqsiife nnqadlenat evlsgylerd isqdslqdik qkvqdkyryc esrrrvllqh
      541 vhegyekdlw eyied
//
LOCUS       XP_061013906             465 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase ARIH1 isoform X2 [Dama dama].
ACCESSION   XP_061013906
VERSION     XP_061013906.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157923.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..465
                     /product="E3 ubiquitin-protein ligase ARIH1 isoform X2"
                     /calculated_mol_wt=54740
     Region          92..150
                     /region_name="RING-HC_RBR_HHARI"
                     /note="RING finger, HC subclass, found in human homolog of
                     Drosophila ariadne (HHARI) and similar proteins; cd16626"
                     /db_xref="CDD:438288"
     Region          159..240
                     /region_name="BRcat_RBR_HHARI-like"
                     /note="BRcat domain found in human homolog of Drosophila
                     Ariadne (HHARI) and similar proteins; cd20343"
                     /db_xref="CDD:439004"
     Region          244..301
                     /region_name="Rcat_RBR_HHARI-like"
                     /note="Rcat domain found in human homolog of Drosophila
                     Ariadne (HHARI) and similar proteins; cd20356"
                     /db_xref="CDD:439017"
     Region          302..>433
                     /region_name="Ariadne"
                     /note="Ariadne domain; pfam19422"
                     /db_xref="CDD:466073"
     CDS             1..465
                     /gene="ARIH1"
                     /coded_by="XM_061157923.1:127..1524"
                     /db_xref="GeneID:133066643"
ORIGIN      
        1 mypggqrghp vhigyfqtye fsdakdrraa aaknpatitr illshfnwdk eklmeryfdg
       61 nleklfaech vinpskksrt rqmntrssaq dmpcqicyln ypnsyftgle cghkfcmqcw
      121 seylttkime egmgqtiscp ahgcdilvdd ntvmrlitds kvklkyqhli tnsfvecnrl
      181 lkwcpapdch hvvkvqypda kpvrckcgrq fcfncgenwh dpvkckwlkk wikkcdddse
      241 tsnwiaantk ecpkchvtie kdggcnhmvc rnqnckaefc wvclgpweph gsawyncnry
      301 neddakaard aqersraalq rylfycnrym nhmqslrfeh klyaqvkqkm eemqqhnmsw
      361 ievqflkkav dvlcqcratl mytyvfafyl kknnqsiife nnqadlenat evlsgylerd
      421 isqdslqdik qkvqdkyryc esrrrvllqh vhegyekdlw eyied
//
LOCUS       XP_061013907             430 aa            linear   MAM 02-DEC-2023
DEFINITION  Bardet-Biedl syndrome 4 protein isoform X1 [Dama dama].
ACCESSION   XP_061013907
VERSION     XP_061013907.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157924.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..430
                     /product="Bardet-Biedl syndrome 4 protein isoform X1"
                     /calculated_mol_wt=47532
     Region          <5..74
                     /region_name="TadD"
                     /note="Flp pilus assembly protein TadD, contains TPR
                     repeats [Intracellular trafficking, secretion, and
                     vesicular transport, Extracellular structures]; COG5010"
                     /db_xref="CDD:444034"
     Region          10..38
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(11,14..15,18..19,21,45,48..49,52..53,55..56,81..82,
                     85..86,89)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          43..73
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          50..307
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          78..105
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          145..173
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          179..207
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(180,183..184,187..188,190,214,217..218,221..222,
                     224..225,248,251..252,255..256,259)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          212..242
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          247..275
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          281..306
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..430
                     /gene="BBS4"
                     /coded_by="XM_061157924.1:198..1490"
                     /db_xref="GeneID:133066644"
ORIGIN      
        1 mcavlspqca dnlkqvarsl fllgkhkaai evyneaakln qkdweichnl gvcyiylkqf
       61 dkaqdqllna lhlnrhdlty imlgkifllk gdldkaieiy kkavefspen tellttlgll
      121 ylqlgiyqka fehlgntlty dptnhkaila agsmmqthgd fdvaltkykv aacgvtespp
      181 lwnniamcff gkkkyvaais clkranylap lewkilynlg lvhltmqqya safhflsaai
      241 nfqpkmgely mllavaltnl edtenakray eeavrldkcn plvnlnyavl lynqgekrga
      301 laqyqemekk vnllkysssl efdpemveva qklgaalqvg ealvwtkpvk dpkskhqtas
      361 tskaacfqqp lgsnqalgqa mssaatygkl psgaggtsql tkppslplep eptveaqpte
      421 asaqtrekqv
//
LOCUS       XP_061013908             521 aa            linear   MAM 02-DEC-2023
DEFINITION  Bardet-Biedl syndrome 4 protein isoform X2 [Dama dama].
ACCESSION   XP_061013908
VERSION     XP_061013908.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157925.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..521
                     /product="Bardet-Biedl syndrome 4 protein isoform X2"
                     /calculated_mol_wt=58053
     Region          35..>201
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          36..61
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          68..95
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          101..129
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(102,105..106,109..110,112,136,139..140,143..144,
                     146..147,172..173,176..177,180)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          134..164
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          141..398
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          169..196
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          236..264
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          270..298
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(271,274..275,278..279,281,305,308..309,312..313,
                     315..316,339,342..343,346..347,350)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          303..333
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          338..366
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          372..397
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..521
                     /gene="BBS4"
                     /coded_by="XM_061157925.1:81..1646"
                     /db_xref="GeneID:133066644"
ORIGIN      
        1 maeeklsvrt qvpasaesqk prlkkapefp ilekqnwlih lhyirkdfea ckavikeqlq
       61 etqglceyai yvqalilrle gniqeslglf qmcavlspqc adnlkqvars lfllgkhkaa
      121 ievyneaakl nqkdweichn lgvcyiylkq fdkaqdqlln alhlnrhdlt yimlgkifll
      181 kgdldkaiei ykkavefspe ntellttlgl lylqlgiyqk afehlgntlt ydptnhkail
      241 aagsmmqthg dfdvaltkyk vaacgvtesp plwnniamcf fgkkkyvaai sclkranyla
      301 plewkilynl glvhltmqqy asafhflsaa infqpkmgel ymllavaltn ledtenakra
      361 yeeavrldkc nplvnlnyav llynqgekrg alaqyqemek kvnllkysss lefdpemvev
      421 aqklgaalqv gealvwtkpv kdpkskhqta stskaacfqq plgsnqalgq amssaatygk
      481 lpsgaggtsq ltkppslple peptveaqpt easaqtrekq v
//
LOCUS       XP_061013909             529 aa            linear   MAM 02-DEC-2023
DEFINITION  beta-hexosaminidase subunit alpha isoform X1 [Dama dama].
ACCESSION   XP_061013909
VERSION     XP_061013909.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157926.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..529
                     /product="beta-hexosaminidase subunit alpha isoform X1"
                     /calculated_mol_wt=60322
     Region          23..145
                     /region_name="Glycohydro_20b2"
                     /note="beta-acetyl hexosaminidase like; pfam14845"
                     /db_xref="CDD:434261"
     Region          167..511
                     /region_name="GH20_HexA_HexB-like"
                     /note="Beta-N-acetylhexosaminidases catalyze the removal
                     of beta-1,4-linked N-acetyl-D-hexosamine residues from the
                     non-reducing ends of N-acetyl-beta-D-hexosaminides
                     including N-acetylglucosides and N-acetylgalactosides. The
                     hexA and hexB genes encode the...; cd06562"
                     /db_xref="CDD:119332"
     Site            order(178,207,262,322..323,373,392,421,423,460,462)
                     /site_type="active"
                     /db_xref="CDD:119332"
     CDS             1..529
                     /gene="HEXA"
                     /coded_by="XM_061157926.1:58..1647"
                     /db_xref="GeneID:133066646"
ORIGIN      
        1 magstlrfsl llaaafagra talwpwpqyi qtselrytif phsfqfqyhl ssaaqvgcsv
       61 ldeafqryrd llfgsvafrf shpiekrhts eknslmvlvv tpgcdqfpsl gsvenytlti
      121 ndeqclllse tvwgalrgle tfsqliwrsp egtfyvnktd iedfprfphr gllldtsrhy
      181 lplasildtl dvmaynkfnv fhwhlvddss fpyesftfpd ltkkgsynpa thiytaqdvk
      241 evieyarlrg irvlaefdtp ghtlswgpgv pglltpcysg shpsgtfgpv npilnntyef
      301 mstffleist vfpdfylhlg gdevdftcwk snpdiqafmk kkgfgddfkk lesfyiqtll
      361 divsaygkgy vvwqevfdnk vkvrpdtiiq vwreeipvky vkemalvtra gfrallsapw
      421 ylnhitygpd wkeiylvepl afegspeqka lviggeacmw geyvdstnlv prlwpragav
      481 aerlwsnkmv snldfafkrl sqfrcellrr gvqaqplsvg ycdmefeqt
//
LOCUS       XP_061013910             434 aa            linear   MAM 02-DEC-2023
DEFINITION  beta-hexosaminidase subunit alpha isoform X2 [Dama dama].
ACCESSION   XP_061013910
VERSION     XP_061013910.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157927.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..434
                     /product="beta-hexosaminidase subunit alpha isoform X2"
                     /calculated_mol_wt=49467
     Region          <2..50
                     /region_name="Glycohydro_20b2"
                     /note="beta-acetyl hexosaminidase like; pfam14845"
                     /db_xref="CDD:434261"
     Region          72..416
                     /region_name="GH20_HexA_HexB-like"
                     /note="Beta-N-acetylhexosaminidases catalyze the removal
                     of beta-1,4-linked N-acetyl-D-hexosamine residues from the
                     non-reducing ends of N-acetyl-beta-D-hexosaminides
                     including N-acetylglucosides and N-acetylgalactosides. The
                     hexA and hexB genes encode the...; cd06562"
                     /db_xref="CDD:119332"
     Site            order(83,112,167,227..228,278,297,326,328,365,367)
                     /site_type="active"
                     /db_xref="CDD:119332"
     CDS             1..434
                     /gene="HEXA"
                     /coded_by="XM_061157927.1:104..1408"
                     /db_xref="GeneID:133066646"
ORIGIN      
        1 mvlvvtpgcd qfpslgsven ytltindeqc lllsetvwga lrgletfsql iwrspegtfy
       61 vnktdiedfp rfphrgllld tsrhylplas ildtldvmay nkfnvfhwhl vddssfpyes
      121 ftfpdltkkg synpathiyt aqdvkeviey arlrgirvla efdtpghtls wgpgvpgllt
      181 pcysgshpsg tfgpvnpiln ntyefmstff leistvfpdf ylhlggdevd ftcwksnpdi
      241 qafmkkkgfg ddfkklesfy iqtlldivsa ygkgyvvwqe vfdnkvkvrp dtiiqvwree
      301 ipvkyvkema lvtragfral lsapwylnhi tygpdwkeiy lveplafegs peqkalvigg
      361 eacmwgeyvd stnlvprlwp ragavaerlw snkmvsnldf afkrlsqfrc ellrrgvqaq
      421 plsvgycdme feqt
//
LOCUS       XP_061013911             480 aa            linear   MAM 02-DEC-2023
DEFINITION  CUGBP Elav-like family member 6 isoform X1 [Dama dama].
ACCESSION   XP_061013911
VERSION     XP_061013911.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157928.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..480
                     /product="CUGBP Elav-like family member 6 isoform X1"
                     /calculated_mol_wt=50236
     Region          41..127
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(47,49,51..52,55,74,76,78,87..89,91,121,123)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          133..213
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(135,137,139..140,143,162,164,166,174..176,178,208,
                     210)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          391..469
                     /region_name="RRM3_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12639"
                     /db_xref="CDD:241083"
     CDS             1..480
                     /gene="CELF6"
                     /coded_by="XM_061157928.1:1..1443"
                     /db_xref="GeneID:133066647"
ORIGIN      
        1 maaapggsap pagpgprlgf stadsgigms glnpgpavpm kdhdaiklfv gqiprgldeq
       61 dlkplfeefg riyeltvlkd rltglhkgca fltycardsa lkaqsalheq ktlpgmnrpi
      121 qvkpaasegr gedrklfvgm lgkqqgeedv rrlfqpfghi eectvlrspd gtskgcafvk
      181 fgsqgeaqaa iqslhgsrtm agassslvvk ladtdreral rrmqqmagql gafhpaplpl
      241 gacgayttai lqhqaallaa aqgpglgpva avaaqmqhva afslvaapll paaansppgg
      301 gpgtlpglpa pigvngfgpl tpqtngqpgs dslynnglsp ypaqspgvad plqqayagmh
      361 hyaaaypsay apvsttfpqq psalpqqqre gpegcnlfiy hlpqefgdae liqtflpfga
      421 vvsakvfvdr atnqskcfgf vsfdnptsaq taiqamngfq igmkrlkvql krpkdanrpy
//
LOCUS       XP_061013912             453 aa            linear   MAM 02-DEC-2023
DEFINITION  CUGBP Elav-like family member 6 isoform X2 [Dama dama].
ACCESSION   XP_061013912
VERSION     XP_061013912.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157929.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..453
                     /product="CUGBP Elav-like family member 6 isoform X2"
                     /calculated_mol_wt=47320
     Region          41..127
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(47,49,51..52,55,74,76,78,87..89,91,121,123)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          133..213
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(135,137,139..140,143,162,164,166,174..176,178,208,
                     210)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          364..442
                     /region_name="RRM3_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12639"
                     /db_xref="CDD:241083"
     CDS             1..453
                     /gene="CELF6"
                     /coded_by="XM_061157929.1:1..1362"
                     /db_xref="GeneID:133066647"
ORIGIN      
        1 maaapggsap pagpgprlgf stadsgigms glnpgpavpm kdhdaiklfv gqiprgldeq
       61 dlkplfeefg riyeltvlkd rltglhkgca fltycardsa lkaqsalheq ktlpgmnrpi
      121 qvkpaasegr gedrklfvgm lgkqqgeedv rrlfqpfghi eectvlrspd gtskgcafvk
      181 fgsqgeaqaa iqslhgsrtm agassslvvk ladtdreral rrmqqmagql gafhpaplpl
      241 gacgayttai lqhqaallaa aqgpglgpva avaaqmqhva afslvaapll paaansppgg
      301 gpgtlpglpa pigvngfgpl tpqtngqpgs dslynnglsp ypaqspgvad plqqayagmh
      361 hyagpegcnl fiyhlpqefg daeliqtflp fgavvsakvf vdratnqskc fgfvsfdnpt
      421 saqtaiqamn gfqigmkrlk vqlkrpkdan rpy
//
LOCUS       XP_061013913             451 aa            linear   MAM 02-DEC-2023
DEFINITION  CUGBP Elav-like family member 6 isoform X3 [Dama dama].
ACCESSION   XP_061013913
VERSION     XP_061013913.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157930.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..451
                     /product="CUGBP Elav-like family member 6 isoform X3"
                     /calculated_mol_wt=47716
     Region          13..99
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Region          <16..359
                     /region_name="SF-CC1"
                     /note="splicing factor, CC1-like family; TIGR01622"
                     /db_xref="CDD:273721"
     Site            order(19,21,23..24,27,46,48,50,59..61,63,93,95)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          105..185
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(107,109,111..112,115,134,136,138,146..148,150,180,
                     182)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          362..440
                     /region_name="RRM3_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12639"
                     /db_xref="CDD:241083"
     CDS             1..451
                     /gene="CELF6"
                     /coded_by="XM_061157930.1:79..1434"
                     /db_xref="GeneID:133066647"
ORIGIN      
        1 msglnpgpav pmkdhdaikl fvgqiprgld eqdlkplfee fgriyeltvl kdrltglhkg
       61 cafltycard salkaqsalh eqktlpgmnr piqvkpaase grgedrklfv gmlgkqqgee
      121 dvrrlfqpfg hieectvlrs pdgtskgcaf vkfgsqgeaq aaiqslhgsr tmagassslv
      181 vkladtdrer alrrmqqmag qlgafhpapl plgacgaytt ailqhqaall aaaqgpglgp
      241 vaavaaqmqh vaafslvaap llpaaanspp gggpgtlpgl papigvngfg pltpqtngqp
      301 gsdslynngl spypaqspgv adplqqayag mhhyaaypsa yapvsttfpq qpsalpqqqr
      361 egpegcnlfi yhlpqefgda eliqtflpfg avvsakvfvd ratnqskcfg fvsfdnptsa
      421 qtaiqamngf qigmkrlkvq lkrpkdanrp y
//
LOCUS       XP_061013914             426 aa            linear   MAM 02-DEC-2023
DEFINITION  CUGBP Elav-like family member 6 isoform X4 [Dama dama].
ACCESSION   XP_061013914
VERSION     XP_061013914.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157931.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..426
                     /product="CUGBP Elav-like family member 6 isoform X4"
                     /calculated_mol_wt=44808
     Region          13..99
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(19,21,23..24,27,46,48,50,59..61,63,93,95)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          105..185
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(107,109,111..112,115,134,136,138,146..148,150,180,
                     182)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          363..>410
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..426
                     /gene="CELF6"
                     /coded_by="XM_061157931.1:79..1359"
                     /db_xref="GeneID:133066647"
ORIGIN      
        1 msglnpgpav pmkdhdaikl fvgqiprgld eqdlkplfee fgriyeltvl kdrltglhkg
       61 cafltycard salkaqsalh eqktlpgmnr piqvkpaase grgedrklfv gmlgkqqgee
      121 dvrrlfqpfg hieectvlrs pdgtskgcaf vkfgsqgeaq aaiqslhgsr tmagassslv
      181 vkladtdrer alrrmqqmag qlgafhpapl plgacgaytt ailqhqaall aaaqgpglgp
      241 vaavaaqmqh vaafslvaap llpaaanspp gggpgtlpgl papigvngfg pltpqtngqp
      301 gsdslynngl spypaqspgv adplqqayag mhhyaaayps ayapvsttfp qqpsalpqqq
      361 regpegcnlf iyhlpqefgd aeliqtflpf gavvsakvfv dratnqskcf dwheeaqgsa
      421 eeaqgc
//
LOCUS       XP_061013915             365 aa            linear   MAM 02-DEC-2023
DEFINITION  CUGBP Elav-like family member 6 isoform X5 [Dama dama].
ACCESSION   XP_061013915
VERSION     XP_061013915.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157932.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..365
                     /product="CUGBP Elav-like family member 6 isoform X5"
                     /calculated_mol_wt=38197
     Region          <2..361
                     /region_name="ELAV_HUD_SF"
                     /note="ELAV/HuD family splicing factor; TIGR01661"
                     /db_xref="CDD:273741"
     Region          18..98
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(20,22,24..25,28,47,49,51,59..61,63,93,95)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          276..354
                     /region_name="RRM3_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12639"
                     /db_xref="CDD:241083"
     CDS             1..365
                     /gene="CELF6"
                     /coded_by="XM_061157932.1:88..1185"
                     /db_xref="GeneID:133066647"
ORIGIN      
        1 mnrpiqvkpa asegrgedrk lfvgmlgkqq geedvrrlfq pfghieectv lrspdgtskg
       61 cafvkfgsqg eaqaaiqslh gsrtmagass slvvkladtd reralrrmqq magqlgafhp
      121 aplplgacga yttailqhqa allaaaqgpg lgpvaavaaq mqhvaafslv aapllpaaan
      181 sppgggpgtl pglpapigvn gfgpltpqtn gqpgsdslyn nglspypaqs pgvadplqqa
      241 yagmhhyaaa ypsayapvst tfpqqpsalp qqqregpegc nlfiyhlpqe fgdaeliqtf
      301 lpfgavvsak vfvdratnqs kcfgfvsfdn ptsaqtaiqa mngfqigmkr lkvqlkrpkd
      361 anrpy
//
LOCUS       XP_061013916             531 aa            linear   MAM 02-DEC-2023
DEFINITION  pyruvate kinase PKM isoform X1 [Dama dama].
ACCESSION   XP_061013916
VERSION     XP_061013916.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157933.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..531
                     /product="pyruvate kinase PKM isoform X1"
                     /calculated_mol_wt=57819
     Region          42..530
                     /region_name="Pyruvate_Kinase"
                     /note="Pyruvate kinase (PK): Large allosteric enzyme that
                     regulates glycolysis through binding of the substrate,
                     phosphoenolpyruvate, and one or more allosteric effectors.
                     Like other allosteric enzymes, PK has a high substrate
                     affinity R state and a low...; cd00288"
                     /db_xref="CDD:238178"
     Site            order(44..45,107,109,117..120,209..210,216,219..223,238,
                     246,253,264,300,318..319,323,355,357,386,388..389,443,445,
                     447,458,461..462,464,466..468)
                     /site_type="active"
                     /note="domain interfaces [active]"
                     /db_xref="CDD:238178"
     Site            order(73,75,113,244,270,272,296,328)
                     /site_type="active"
                     /db_xref="CDD:238178"
     CDS             1..531
                     /gene="PKM"
                     /coded_by="XM_061157933.1:187..1782"
                     /db_xref="GeneID:133066649"
ORIGIN      
        1 mskhhsdagt afiqtqqlha amadtflehm crldidsppi tarntgiict igpasravet
       61 lkemiksgmn varlnfshgt heyhaetikn vreatesfas dpilyrpvav aldtkgpeir
      121 tglikgsgta evelkkgatl kitldnayme kcdenilwld yknickvvdv gskiyvddgl
      181 isllvkqkgp dflvteveng gslgskkgvn lpgaavdlpa vsekdiqdlk fgveqdvdmv
      241 fasfirkasd vhevrkvlge kgknikiisk ienhegvrrf deileasdgi mvargdlgie
      301 ipaekvflaq kmmigrcnra gkpvicatqm lesmikkprp traegsdvan avldgadcim
      361 lsgetakgdy pleavrmqhl iareaeaaiy hlqlfeelrr lspitsdpte aaavgaveas
      421 fkccsgaiiv ltksgrsahq varyrprapi iavtrnhqta rqahlyrgif pvvckdpvqe
      481 awaedvdlrv nlamnvgkar gffkkgdvvi vltgwrpgsg ftntmrvvpv p
//
LOCUS       XP_061013918             531 aa            linear   MAM 02-DEC-2023
DEFINITION  pyruvate kinase PKM isoform X2 [Dama dama].
ACCESSION   XP_061013918
VERSION     XP_061013918.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157935.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..531
                     /product="pyruvate kinase PKM isoform X2"
                     /calculated_mol_wt=57930
     Region          42..530
                     /region_name="Pyruvate_Kinase"
                     /note="Pyruvate kinase (PK): Large allosteric enzyme that
                     regulates glycolysis through binding of the substrate,
                     phosphoenolpyruvate, and one or more allosteric effectors.
                     Like other allosteric enzymes, PK has a high substrate
                     affinity R state and a low...; cd00288"
                     /db_xref="CDD:238178"
     Site            order(44..45,107,109,117..120,209..210,216,219..223,238,
                     246,253,264,300,318..319,323,355,357,386,388..389,443,445,
                     447,458,461..462,464,466..468)
                     /site_type="active"
                     /note="domain interfaces [active]"
                     /db_xref="CDD:238178"
     Site            order(73,75,113,244,270,272,296,328)
                     /site_type="active"
                     /db_xref="CDD:238178"
     CDS             1..531
                     /gene="PKM"
                     /coded_by="XM_061157935.1:205..1800"
                     /db_xref="GeneID:133066649"
ORIGIN      
        1 mskhhsdagt afiqtqqlha amadtflehm crldidsppi tarntgiict igpasravet
       61 lkemiksgmn varlnfshgt heyhaetikn vreatesfas dpilyrpvav aldtkgpeir
      121 tglikgsgta evelkkgatl kitldnayme kcdenilwld yknickvvdv gskiyvddgl
      181 isllvkqkgp dflvteveng gslgskkgvn lpgaavdlpa vsekdiqdlk fgveqdvdmv
      241 fasfirkasd vhevrkvlge kgknikiisk ienhegvrrf deileasdgi mvargdlgie
      301 ipaekvflaq kmmigrcnra gkpvicatqm lesmikkprp traegsdvan avldgadcim
      361 lsgetakgdy pleavrmqhl iareaeaamf hrklfeelar asshstdlme amamgsveas
      421 ykclaaaliv ltesgrsahq varyrprapi iavtrnhqta rqahlyrgif pvvckdpvqe
      481 awaedvdlrv nlamnvgkar gffkkgdvvi vltgwrpgsg ftntmrvvpv p
//
LOCUS       XP_061013919             611 aa            linear   MAM 02-DEC-2023
DEFINITION  protein mono-ADP-ribosyltransferase PARP6 [Dama dama].
ACCESSION   XP_061013919
VERSION     XP_061013919.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157936.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..611
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..611
                     /product="protein mono-ADP-ribosyltransferase PARP6"
                     /calculated_mol_wt=69092
     Region          225..338
                     /region_name="ADP_ribosyl"
                     /note="ADP_ribosylating enzymes catalyze the transfer of
                     ADP_ribose from NAD+ to substrates. Bacterial toxins are
                     cytoplasmic and catalyze the transfer of a single
                     ADP_ribose unit to eukaryotic elongation factor 2, halting
                     protein synthesis and killing the cell; cd01341"
                     /db_xref="CDD:238651"
     Region          451..575
                     /region_name="ADP_ribosyl"
                     /note="ADP_ribosylating enzymes catalyze the transfer of
                     ADP_ribose from NAD+ to substrates. Bacterial toxins are
                     cytoplasmic and catalyze the transfer of a single
                     ADP_ribose unit to eukaryotic elongation factor 2, halting
                     protein synthesis and killing the cell; cd01341"
                     /db_xref="CDD:238651"
     Site            order(453..457,460,464,468..470,472,488..490,500,561)
                     /site_type="other"
                     /note="nad+ binding pocket [chemical binding]"
                     /db_xref="CDD:238651"
     CDS             1..611
                     /gene="PARP6"
                     /coded_by="XM_061157936.1:1556..3391"
                     /db_xref="GeneID:133066650"
ORIGIN      
        1 mdikgqfwnd ddsegdnese eflygvqgsc aadlyrhpql dadieavkei ysensvsire
       61 ygtiddvdid lhinisflde evstawkvlr tepivlrlrf slsqyldgpe psievfqpsn
      121 kegfglglql kkilgmftsq qwkhlsndfl ktqqekrhsw fkasgtikkf raglsifspi
      181 pkspsfpiiq dsmlkgklgv pdlrvgrlmn rsisctmknp kvevfgypps pqvsghckni
      241 ptleygflvq imkyaeqrip tlneycvvcd eqhvfqngsm lkpavctrel cvfsfytlgv
      301 msgaaeevat gaevvdllva mcraalespr ksiifepyps vvdptdpktl afnpkkknye
      361 rlqkaldsvm siremtqgsy leikkqmdkl dplahpllqw iissnrshiv klplsrqlkf
      421 mhtshqflll ssppakearf rtakklygst fafhgshien whsilrnglv nasytklqlh
      481 gaaygkgiyl spissisfgy sgmgkgqhrm pskdelvqry nrmntipqtr siqsrflqsr
      541 nlncialcev itskdlqkhg niwvcpvsdh vctrfffvye dgqvgdanin tqdpkiqkei
      601 mrvigtqvyt n
//
LOCUS       XP_061013920            2649 aa            linear   MAM 02-DEC-2023
DEFINITION  unconventional myosin-IXa isoform X1 [Dama dama].
ACCESSION   XP_061013920
VERSION     XP_061013920.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157937.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2649
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2649
                     /product="unconventional myosin-IXa isoform X1"
                     /calculated_mol_wt=303713
     Region          15..110
                     /region_name="RA_Myosin-IXa"
                     /note="Ras-associating (RA) domain found in Myosin-IXa;
                     cd17216"
                     /db_xref="CDD:340736"
     Region          160..1005
                     /region_name="MYSc_Myo9"
                     /note="class IX myosin, motor domain; cd01385"
                     /db_xref="CDD:276836"
     Site            order(187..195,239..246,285..295,538..543)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276836"
     Site            187..195
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276836"
     Site            239..246
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276836"
     Site            285..295
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276836"
     Site            481
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:276836"
     Site            538..543
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276836"
     Site            order(567..578,581..590)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276836"
     Site            941..950
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276836"
     Site            order(953..980,984..1005)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276836"
     Region          2078..2135
                     /region_name="C1_Myosin-IXa"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in unconventional myosin-IXa and similar proteins;
                     cd20883"
                     /db_xref="CDD:410433"
     Region          2144..2329
                     /region_name="RhoGAP_myosin_IX"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in class IX myosins. Class
                     IX myosins contain a characteristic head domain, a neck
                     domain, a tail domain which contains a C6H2-zinc binding
                     motif and a RhoGAP domain. Class...; cd04377"
                     /db_xref="CDD:239842"
     Site            order(2181,2218,2222,2291,2294..2295,2320)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239842"
     Site            2181
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239842"
     CDS             1..2649
                     /gene="MYO9A"
                     /coded_by="XM_061157937.1:445..8394"
                     /db_xref="GeneID:133066651"
ORIGIN      
        1 mnindggrrr fednehtlri ypgtisegti ycpiparkns taaevidsli nklhldktkc
       61 yvlaevkefg geewilnptd cpvqrmmlwp rmalenrlsg edyrfllrek nldgsihygs
      121 lqswlrvtee rrrmmergfl pqpqqkdfdd lcslpdlnek tllenlrnrf khekiytyvg
      181 siliainpfk flpiynpkyv kmydnhqlgk lephiyavad vayhamlqrk knqcivisge
      241 sgsgktqstn flihhltals qkgfasgveq iilgagpvle afgnaktahn nnssrfgkfi
      301 qvnyqetgtv lgayvekyll eksrlvyqeh nernyhvfyy llagaseeer lafhlkqpee
      361 yhylnqitkk plrqswddyc fdsepqdcft vegedlrhdf erlqlamemv gflpktrrqi
      421 fsllsailhl gnicykkkty rddsidicnp evlpvvsell evkeemlfea lvtrktvtvg
      481 eklilpykla eavtvrnsma kslysalfdw ivfrinhalm nskdleqntk tlsigvldif
      541 gfedyennsf eqfcinfane rlqhyfnqhi fkleqeeyrt egiswhnidy idntccinli
      601 skkptgllhl ldeesnfpqa tnqtlldkfk hqheensyie fpavmepafi ikhyagkvky
      661 gvkdfreknt dhmrpdival lrssknafis gmigidpvav frwsvlraff ramvafreag
      721 krhiqrktgh ddtapcavlk smdsisflqh pvhqrsleil qrckeekysi trknprtpls
      781 dlqgmntlne knqhetfdfa wngrtgirqs klssntslld kdgifansas skllerahgi
      841 ltrnknfksk pglpkhllev kslkhltrlt lqdritksll hlhkkkkpps isaqfqasls
      901 klmetlgqae pyfvkcirsn aeklplrfsd alvlrqlryt gmletvrirq sgysckysfq
      961 dfvshfhvll prniipskfn iqdffrkinl npdnyqvgks mvflkeqerq hlqdllhqev
     1021 lrriillqrw frvllcrqhf lhlrqasvvi qqfwrnyvhq kqardaavqk dalllasaat
     1081 llqaswrahl erqrylelrt aavviqqrwr krcrrrhlaa vciqarwrgy reskryqeqr
     1141 nkiillqsly rgfrarqrfk slkeqrvkea klelglasik pygtleihgs dpskwedcsf
     1201 dsrvkaieec ksviesnris hessmdclne spnkrqerar sqsgvdlqen vivrerpksl
     1261 edlhqkkvsr akresrrmre leqaifslel lkvrslggvs pseerrwste lmpeglrslq
     1321 gtpdsesshg slellscees qkskpepiit derdlpfvpp evscspdfep qdysvsatse
     1381 tnytltqrgp psdsvhlkng amkeklvcss esitckpqlr dpfisnslpt ffyiphqdpl
     1441 ktssqldtsv qrskllesee tlpsltldis reagkyhlpg enqvvaslnt dssntvlkkl
     1501 eklntekeer qkqlqqqnek emmkqirrqk dilekerkaf ktiekprtge sflvpsfhqs
     1561 kqrierpssl lilktpnkde essmvgtpsv tikdsvlapk dspsthlplk drpvtlffer
     1621 kggpgqshtv kelsktdrvs tqlnvackhs hsriskrehl rpaqpcshks ddpfrdaatk
     1681 aifftpkenm ssslvtmeal nsgnpqlqkq deptwkpvkl tgpgqgevar pahkkkarma
     1741 rtrsdfltrg tfadgegdte eddyddiiep llspdqashs elgpapslgq ashsdsemts
     1801 qrfssvdeea klhktmsqge itklavrqkt sdsdirpqra kmrfwakgkq gekkttrgkp
     1861 dthsevsaff agsdmipahq fpdelshnhp tpplspelpg scrkefkenk epspkarrrr
     1921 svkissvale smhwqndsvq iiasasdlks mdefllkkmn dldnedskkd tlvdvvfkka
     1981 lkefrqnifs fyssalavdd gksirykdly alfeqilekt mrleqrdwse spvrvwvntf
     2041 kvfldeymne fktleyiptk vpkterkkrr kkesdlveeh nghifkatqy siptyceycs
     2101 sliwimdras vcklckyach kkccpkttak cskkydpels srqfgvelsr ltsedrtvpl
     2161 vveklinyie mhglytegiy rksgstnkik elrqgldtda envnlddyni hviasvfkqw
     2221 lrdlpnplmt felyeeflra mglqerketi rgvysvidql srthlntler lifhlvrial
     2281 qedtnrmsan alaivfapci lrcpdtidpl qsvqdisktt tcvelivveq mnkykarlkd
     2341 isslefaenk aktrlslirr smkpvliavr fmsitrssvs gkgrlrrgny pcpsspavvr
     2401 lpsmsdvtee tltseaaldt diteqqqaam qqeervlteq ienlqkekee ltfemlvlep
     2461 rasddetles easigtadss enlniesega iseksersla listkaagks epssklrkql
     2521 kkqqdsldsv dssvsslcss gtasshgtrr rfqiyskspf yrassageal gmegpsgqtk
     2581 sledkpqfis rgtfnpekgk qklknvknsp qktketpegi vvsgrrktvd pdcssaqqla
     2641 lfgnnefmv
//
LOCUS       XP_061013921            2649 aa            linear   MAM 02-DEC-2023
DEFINITION  unconventional myosin-IXa isoform X2 [Dama dama].
ACCESSION   XP_061013921
VERSION     XP_061013921.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157938.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2649
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2649
                     /product="unconventional myosin-IXa isoform X2"
                     /calculated_mol_wt=303713
     Region          15..110
                     /region_name="RA_Myosin-IXa"
                     /note="Ras-associating (RA) domain found in Myosin-IXa;
                     cd17216"
                     /db_xref="CDD:340736"
     Region          160..1004
                     /region_name="MYSc_Myo9"
                     /note="class IX myosin, motor domain; cd01385"
                     /db_xref="CDD:276836"
     Site            order(187..195,239..246,285..295,537..542)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276836"
     Site            187..195
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276836"
     Site            239..246
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276836"
     Site            285..295
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276836"
     Site            480
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:276836"
     Site            537..542
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276836"
     Site            order(566..577,580..589)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276836"
     Site            940..949
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276836"
     Site            order(952..979,983..1004)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276836"
     Region          <1496..1769
                     /region_name="PTZ00108"
                     /note="DNA topoisomerase 2-like protein; Provisional"
                     /db_xref="CDD:240271"
     Region          2078..2135
                     /region_name="C1_Myosin-IXa"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in unconventional myosin-IXa and similar proteins;
                     cd20883"
                     /db_xref="CDD:410433"
     Region          2144..2329
                     /region_name="RhoGAP_myosin_IX"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in class IX myosins. Class
                     IX myosins contain a characteristic head domain, a neck
                     domain, a tail domain which contains a C6H2-zinc binding
                     motif and a RhoGAP domain. Class...; cd04377"
                     /db_xref="CDD:239842"
     Site            order(2181,2218,2222,2291,2294..2295,2320)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239842"
     Site            2181
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239842"
     CDS             1..2649
                     /gene="MYO9A"
                     /coded_by="XM_061157938.1:445..8394"
                     /db_xref="GeneID:133066651"
ORIGIN      
        1 mnindggrrr fednehtlri ypgtisegti ycpiparkns taaevidsli nklhldktkc
       61 yvlaevkefg geewilnptd cpvqrmmlwp rmalenrlsg edyrfllrek nldgsihygs
      121 lqswlrvtee rrrmmergfl pqpqqkdfdd lcslpdlnek tllenlrnrf khekiytyvg
      181 siliainpfk flpiynpkyv kmydnhqlgk lephiyavad vayhamlqrk knqcivisge
      241 sgsgktqstn flihhltals qkgfasgveq iilgagpvle afgnaktahn nnssrfgkfi
      301 qvnyqetgtv lgayvekyll eksrlvyqeh nernyhvfyy llagaseeer lafhlkqpee
      361 yhylnqitkk plrqswddyc fdsepdcftv egedlrhdfe rlqlamemvg flpktrrqif
      421 sllsailhlg nicykkktyr ddsidicnpe vlpvvselle vkeemlfeal vtrktvtvge
      481 klilpyklae avtvrnsmak slysalfdwi vfrinhalmn skdleqntkt lsigvldifg
      541 fedyennsfe qfcinfaner lqhyfnqhif kleqeeyrte giswhnidyi dntccinlis
      601 kkptgllhll deesnfpqat nqtlldkfkh qheensyief pavmepafii khyagkvkyg
      661 vkdfrekntd hmrpdivall rssknafisg migidpvavf rwsvlraffr amvafreagk
      721 rhiqrktghd dtapcavlks mdsisflqhp vhqrsleilq rckeekysit rknprtplsd
      781 lqgmntlnek nqhetfdfaw ngrtgirqsk lssntslldk dgifansass kllerahgil
      841 trnknfkskp glpkhllevk slkhltrltl qdritksllh lhkkkkppsi saqfqaslsk
      901 lmetlgqaep yfvkcirsna eklplrfsda lvlrqlrytg mletvrirqs gysckysfqd
      961 fvshfhvllp rniipskfni qdffrkinln pdnyqvgksm vflkeqerqh lqdllhqevl
     1021 rriillqrwf rvllcrqhfl hlrqasvviq qfwrnyvhqk qardaavqkd alllasaatl
     1081 lqaswrahle rqrylelrta avviqqrwrk rcrrrhlaav ciqarwrgyr eskryqeqrn
     1141 kiillqslyr gfrarqrfks lkeqrvkeak lelglasikp ygtleihgsd pskwedcsfd
     1201 srvkaieeck sviesnrish essmdclnes pnkrqerars qsgvdlqenv ivrerpksle
     1261 dlhqkkvsra kresrrmrel eqaifslell kvrslggvsp seerrwstel mpeglrslqg
     1321 tpdsesshgs lellsceesq kskpepiitd erdlpfvppe vscspdfepq dysvsatset
     1381 nytltqrgpp sdsvhlknga mkeklvcsse sitckpqlrd pfisnslptf fyiphqdplk
     1441 tssqldtsvq rsklleseet lpsltldisr eagkyhlpge nqvvaslntd ssntvlkkle
     1501 klntekeerq kqlqqqneke mmkqirrqkd ilekerkafk tiekprtges flvpsfhqsk
     1561 qrierpssll ilktpnkdee ssmvgtpsvt ikdsvlapkd spsthlplkd rpvtlfferk
     1621 ggpgqshtvk elsktdrvst qlnvackhsh sriskrehlr paqpcshksd dpfrdaatka
     1681 ifftpkenms sslvtmealn sgnpqlqkqd eptwkpvklt gpgqgeqvar pahkkkarma
     1741 rtrsdfltrg tfadgegdte eddyddiiep llspdqashs elgpapslgq ashsdsemts
     1801 qrfssvdeea klhktmsqge itklavrqkt sdsdirpqra kmrfwakgkq gekkttrgkp
     1861 dthsevsaff agsdmipahq fpdelshnhp tpplspelpg scrkefkenk epspkarrrr
     1921 svkissvale smhwqndsvq iiasasdlks mdefllkkmn dldnedskkd tlvdvvfkka
     1981 lkefrqnifs fyssalavdd gksirykdly alfeqilekt mrleqrdwse spvrvwvntf
     2041 kvfldeymne fktleyiptk vpkterkkrr kkesdlveeh nghifkatqy siptyceycs
     2101 sliwimdras vcklckyach kkccpkttak cskkydpels srqfgvelsr ltsedrtvpl
     2161 vveklinyie mhglytegiy rksgstnkik elrqgldtda envnlddyni hviasvfkqw
     2221 lrdlpnplmt felyeeflra mglqerketi rgvysvidql srthlntler lifhlvrial
     2281 qedtnrmsan alaivfapci lrcpdtidpl qsvqdisktt tcvelivveq mnkykarlkd
     2341 isslefaenk aktrlslirr smkpvliavr fmsitrssvs gkgrlrrgny pcpsspavvr
     2401 lpsmsdvtee tltseaaldt diteqqqaam qqeervlteq ienlqkekee ltfemlvlep
     2461 rasddetles easigtadss enlniesega iseksersla listkaagks epssklrkql
     2521 kkqqdsldsv dssvsslcss gtasshgtrr rfqiyskspf yrassageal gmegpsgqtk
     2581 sledkpqfis rgtfnpekgk qklknvknsp qktketpegi vvsgrrktvd pdcssaqqla
     2641 lfgnnefmv
//
LOCUS       XP_061013922            2632 aa            linear   MAM 02-DEC-2023
DEFINITION  unconventional myosin-IXa isoform X3 [Dama dama].
ACCESSION   XP_061013922
VERSION     XP_061013922.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157939.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2632
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2632
                     /product="unconventional myosin-IXa isoform X3"
                     /calculated_mol_wt=301867
     Region          15..110
                     /region_name="RA_Myosin-IXa"
                     /note="Ras-associating (RA) domain found in Myosin-IXa;
                     cd17216"
                     /db_xref="CDD:340736"
     Region          160..1005
                     /region_name="MYSc_Myo9"
                     /note="class IX myosin, motor domain; cd01385"
                     /db_xref="CDD:276836"
     Site            order(187..195,239..246,285..295,538..543)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276836"
     Site            187..195
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276836"
     Site            239..246
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276836"
     Site            285..295
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276836"
     Site            481
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:276836"
     Site            538..543
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276836"
     Site            order(567..578,581..590)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276836"
     Site            941..950
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276836"
     Site            order(953..980,984..1005)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276836"
     Region          <1497..1770
                     /region_name="PTZ00108"
                     /note="DNA topoisomerase 2-like protein; Provisional"
                     /db_xref="CDD:240271"
     Region          2079..2136
                     /region_name="C1_Myosin-IXa"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in unconventional myosin-IXa and similar proteins;
                     cd20883"
                     /db_xref="CDD:410433"
     Region          2145..2330
                     /region_name="RhoGAP_myosin_IX"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in class IX myosins. Class
                     IX myosins contain a characteristic head domain, a neck
                     domain, a tail domain which contains a C6H2-zinc binding
                     motif and a RhoGAP domain. Class...; cd04377"
                     /db_xref="CDD:239842"
     Site            order(2182,2219,2223,2292,2295..2296,2321)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239842"
     Site            2182
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239842"
     CDS             1..2632
                     /gene="MYO9A"
                     /coded_by="XM_061157939.1:445..8343"
                     /db_xref="GeneID:133066651"
ORIGIN      
        1 mnindggrrr fednehtlri ypgtisegti ycpiparkns taaevidsli nklhldktkc
       61 yvlaevkefg geewilnptd cpvqrmmlwp rmalenrlsg edyrfllrek nldgsihygs
      121 lqswlrvtee rrrmmergfl pqpqqkdfdd lcslpdlnek tllenlrnrf khekiytyvg
      181 siliainpfk flpiynpkyv kmydnhqlgk lephiyavad vayhamlqrk knqcivisge
      241 sgsgktqstn flihhltals qkgfasgveq iilgagpvle afgnaktahn nnssrfgkfi
      301 qvnyqetgtv lgayvekyll eksrlvyqeh nernyhvfyy llagaseeer lafhlkqpee
      361 yhylnqitkk plrqswddyc fdsepqdcft vegedlrhdf erlqlamemv gflpktrrqi
      421 fsllsailhl gnicykkkty rddsidicnp evlpvvsell evkeemlfea lvtrktvtvg
      481 eklilpykla eavtvrnsma kslysalfdw ivfrinhalm nskdleqntk tlsigvldif
      541 gfedyennsf eqfcinfane rlqhyfnqhi fkleqeeyrt egiswhnidy idntccinli
      601 skkptgllhl ldeesnfpqa tnqtlldkfk hqheensyie fpavmepafi ikhyagkvky
      661 gvkdfreknt dhmrpdival lrssknafis gmigidpvav frwsvlraff ramvafreag
      721 krhiqrktgh ddtapcavlk smdsisflqh pvhqrsleil qrckeekysi trknprtpls
      781 dlqgmntlne knqhetfdfa wngrtgirqs klssntslld kdgifansas skllerahgi
      841 ltrnknfksk pglpkhllev kslkhltrlt lqdritksll hlhkkkkpps isaqfqasls
      901 klmetlgqae pyfvkcirsn aeklplrfsd alvlrqlryt gmletvrirq sgysckysfq
      961 dfvshfhvll prniipskfn iqdffrkinl npdnyqvgks mvflkeqerq hlqdllhqev
     1021 lrriillqrw frvllcrqhf lhlrqasvvi qqfwrnyvhq kqardaavqk dalllasaat
     1081 llqaswrahl erqrylelrt aavviqqrwr krcrrrhlaa vciqarwrgy reskryqeqr
     1141 nkiillqsly rgfrarqrfk slkeqrvkea klelglasik pygtleihgs dpskwedcsf
     1201 dsrvkaieec ksviesnris hessmdclne spnkrqerar sqsgvdlqen vivrerpksl
     1261 edlhqkkvsr akresrrmre leqaifslel lkvrslggvs pseerrwste lmpeglrslq
     1321 gtpdsesshg slellscees qkskpepiit derdlpfvpp evscspdfep qdysvsatse
     1381 tnytltqrgp psdsvhlkng amkeklvcss esitckpqlr dpfisnslpt ffyiphqdpl
     1441 ktssqldtsv qrskllesee tlpsltldis reagkyhlpg enqvvaslnt dssntvlkkl
     1501 eklntekeer qkqlqqqnek emmkqirrqk dilekerkaf ktiekprtge sflvpsfhqs
     1561 kqrierpssl lilktpnkde essmvgtpsv tikdsvlapk dspsthlplk drpvtlffer
     1621 kggpgqshtv kelsktdrvs tqlnvackhs hsriskrehl rpaqpcshks ddpfrdaatk
     1681 aifftpkenm ssslvtmeal nsgnpqlqkq deptwkpvkl tgpgqgeqva rpahkkkarm
     1741 artrsdfltr gtfadgegdt eeddyddiie pllspdqash selgpapslg qashsdsemt
     1801 sqrfssvdee aklhktmsqg eitklavrqk tsdsdirpqr akmrfwakgk qgekkttrgk
     1861 pdthsevsaf fagsdmipah qfpdelshnh ptpplspelp gscrkefken kepspkarrr
     1921 rsvkissval esmhwqndsv qiiasasdlk smdefllkkm ndldnedskk dtlvdvvfkk
     1981 alkefrqnif sfyssalavd dgksirykdl yalfeqilek tmrleqrdws espvrvwvnt
     2041 fkvfldeymn efktleyipt kvpkterkkr rkkesdlvee hnghifkatq ysiptyceyc
     2101 ssliwimdra svcklckyac hkkccpktta kcskkydpel ssrqfgvels rltsedrtvp
     2161 lvveklinyi emhglytegi yrksgstnki kelrqgldtd aenvnlddyn ihviasvfkq
     2221 wlrdlpnplm tfelyeeflr amglqerket irgvysvidq lsrthlntle rlifhlvria
     2281 lqedtnrmsa nalaivfapc ilrcpdtidp lqsvqdiskt ttcvelivve qmnkykarlk
     2341 disslefaen kaktrlslir rsmgkgrlrr gnypcpsspa vvrlpsmsdv teetltseaa
     2401 ldtditeqqq aamqqeervl teqienlqke keeltfemlv leprasddet leseasigta
     2461 dssenlnies egaisekser slalistkaa gksepssklr kqlkkqqdsl dsvdssvssl
     2521 cssgtasshg trrrfqiysk spfyrassag ealgmegpsg qtksledkpq fisrgtfnpe
     2581 kgkqklknvk nspqktketp egivvsgrrk tvdpdcssaq qlalfgnnef mv
//
LOCUS       XP_061013923            2631 aa            linear   MAM 02-DEC-2023
DEFINITION  unconventional myosin-IXa isoform X4 [Dama dama].
ACCESSION   XP_061013923
VERSION     XP_061013923.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157940.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2631
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2631
                     /product="unconventional myosin-IXa isoform X4"
                     /calculated_mol_wt=301530
     Region          15..110
                     /region_name="RA_Myosin-IXa"
                     /note="Ras-associating (RA) domain found in Myosin-IXa;
                     cd17216"
                     /db_xref="CDD:340736"
     Region          160..986
                     /region_name="MYSc_Myo9"
                     /note="class IX myosin, motor domain; cd01385"
                     /db_xref="CDD:276836"
     Site            order(187..195,239..246,285..295,519..524)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276836"
     Site            187..195
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276836"
     Site            239..246
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276836"
     Site            285..295
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276836"
     Site            462
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:276836"
     Site            519..524
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276836"
     Site            order(548..559,562..571)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276836"
     Site            922..931
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276836"
     Site            order(934..961,965..986)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276836"
     Region          <1478..1751
                     /region_name="PTZ00108"
                     /note="DNA topoisomerase 2-like protein; Provisional"
                     /db_xref="CDD:240271"
     Region          2060..2117
                     /region_name="C1_Myosin-IXa"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in unconventional myosin-IXa and similar proteins;
                     cd20883"
                     /db_xref="CDD:410433"
     Region          2126..2311
                     /region_name="RhoGAP_myosin_IX"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in class IX myosins. Class
                     IX myosins contain a characteristic head domain, a neck
                     domain, a tail domain which contains a C6H2-zinc binding
                     motif and a RhoGAP domain. Class...; cd04377"
                     /db_xref="CDD:239842"
     Site            order(2163,2200,2204,2273,2276..2277,2302)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239842"
     Site            2163
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239842"
     CDS             1..2631
                     /gene="MYO9A"
                     /coded_by="XM_061157940.1:445..8340"
                     /db_xref="GeneID:133066651"
ORIGIN      
        1 mnindggrrr fednehtlri ypgtisegti ycpiparkns taaevidsli nklhldktkc
       61 yvlaevkefg geewilnptd cpvqrmmlwp rmalenrlsg edyrfllrek nldgsihygs
      121 lqswlrvtee rrrmmergfl pqpqqkdfdd lcslpdlnek tllenlrnrf khekiytyvg
      181 siliainpfk flpiynpkyv kmydnhqlgk lephiyavad vayhamlqrk knqcivisge
      241 sgsgktqstn flihhltals qkgfasgveq iilgagpvle afgnaktahn nnssrfgkfi
      301 qvnyqetgtv lgayvekyll eksrlvyqeh nernyhvfyy llagaseeer lafhlkqpee
      361 yhylnqqdcf tvegedlrhd ferlqlamem vgflpktrrq ifsllsailh lgnicykkkt
      421 yrddsidicn pevlpvvsel levkeemlfe alvtrktvtv geklilpykl aeavtvrnsm
      481 akslysalfd wivfrinhal mnskdleqnt ktlsigvldi fgfedyenns feqfcinfan
      541 erlqhyfnqh ifkleqeeyr tegiswhnid yidntccinl iskkptgllh lldeesnfpq
      601 atnqtlldkf khqheensyi efpavmepaf iikhyagkvk ygvkdfrekn tdhmrpdiva
      661 llrssknafi sgmigidpva vfrwsvlraf framvafrea gkrhiqrktg hddtapcavl
      721 ksmdsisflq hpvhqrslei lqrckeekys itrknprtpl sdlqgmntln eknqhetfdf
      781 awngrtgirq sklssntsll dkdgifansa sskllerahg iltrnknfks kpglpkhlle
      841 vkslkhltrl tlqdritksl lhlhkkkkpp sisaqfqasl sklmetlgqa epyfvkcirs
      901 naeklplrfs dalvlrqlry tgmletvrir qsgysckysf qdfvshfhvl lprniipskf
      961 niqdffrkin lnpdnyqvgk smvflkeqer qhlqdllhqe vlrriillqr wfrvllcrqh
     1021 flhlrqasvv iqqfwrnyvh qkqardaavq kdalllasaa tllqaswrah lerqrylelr
     1081 taavviqqrw rkrcrrrhla avciqarwrg yreskryqeq rnkiillqsl yrgfrarqrf
     1141 kslkeqrvke aklelglasi kpygtleihg sdpskwedcs fdsrvkaiee cksviesnri
     1201 shessmdcln espnkrqera rsqsgvdlqe nvivrerpks ledlhqkkvs rakresrrmr
     1261 eleqaifsle llkvrslggv spseerrwst elmpeglrsl qgtpdsessh gslellscee
     1321 sqkskpepii tderdlpfvp pevscspdfe pqdysvsats etnytltqrg ppsdsvhlkn
     1381 gamkeklvcs sesitckpql rdpfisnslp tffyiphqdp lktssqldts vqrskllese
     1441 etlpsltldi sreagkyhlp genqvvasln tdssntvlkk leklntekee rqkqlqqqne
     1501 kemmkqirrq kdilekerka fktiekprtg esflvpsfhq skqrierpss llilktpnkd
     1561 eessmvgtps vtikdsvlap kdspsthlpl kdrpvtlffe rkggpgqsht vkelsktdrv
     1621 stqlnvackh shsriskreh lrpaqpcshk sddpfrdaat kaifftpken mssslvtmea
     1681 lnsgnpqlqk qdeptwkpvk ltgpgqgeqv arpahkkkar martrsdflt rgtfadgegd
     1741 teeddyddii epllspdqas hselgpapsl gqashsdsem tsqrfssvde eaklhktmsq
     1801 geitklavrq ktsdsdirpq rakmrfwakg kqgekkttrg kpdthsevsa ffagsdmipa
     1861 hqfpdelshn hptpplspel pgscrkefke nkepspkarr rrsvkissva lesmhwqnds
     1921 vqiiasasdl ksmdefllkk mndldnedsk kdtlvdvvfk kalkefrqni fsfyssalav
     1981 ddgksirykd lyalfeqile ktmrleqrdw sespvrvwvn tfkvfldeym nefktleyip
     2041 tkvpkterkk rrkkesdlve ehnghifkat qysiptycey cssliwimdr asvcklckya
     2101 chkkccpktt akcskkydpe lssrqfgvel srltsedrtv plvvekliny iemhglyteg
     2161 iyrksgstnk ikelrqgldt daenvnlddy nihviasvfk qwlrdlpnpl mtfelyeefl
     2221 ramglqerke tirgvysvid qlsrthlntl erlifhlvri alqedtnrms analaivfap
     2281 cilrcpdtid plqsvqdisk tttcvelivv eqmnkykarl kdisslefae nkaktrlsli
     2341 rrsmkpvlia vrfmsitrss vsgkgrlrrg nypcpsspav vrlpsmsdvt eetltseaal
     2401 dtditeqqqa amqqeervlt eqienlqkek eeltfemlvl eprasddetl eseasigtad
     2461 ssenlniese gaiseksers lalistkaag ksepssklrk qlkkqqdsld svdssvsslc
     2521 ssgtasshgt rrrfqiysks pfyrassage algmegpsgq tksledkpqf isrgtfnpek
     2581 gkqklknvkn spqktketpe givvsgrrkt vdpdcssaqq lalfgnnefm v
//
LOCUS       XP_061013924            2630 aa            linear   MAM 02-DEC-2023
DEFINITION  unconventional myosin-IXa isoform X5 [Dama dama].
ACCESSION   XP_061013924
VERSION     XP_061013924.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157941.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2630
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2630
                     /product="unconventional myosin-IXa isoform X5"
                     /calculated_mol_wt=301402
     Region          15..110
                     /region_name="RA_Myosin-IXa"
                     /note="Ras-associating (RA) domain found in Myosin-IXa;
                     cd17216"
                     /db_xref="CDD:340736"
     Region          160..985
                     /region_name="MYSc_Myo9"
                     /note="class IX myosin, motor domain; cd01385"
                     /db_xref="CDD:276836"
     Site            order(187..195,239..246,285..295,518..523)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276836"
     Site            187..195
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276836"
     Site            239..246
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276836"
     Site            285..295
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276836"
     Site            461
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:276836"
     Site            518..523
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276836"
     Site            order(547..558,561..570)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276836"
     Site            921..930
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276836"
     Site            order(933..960,964..985)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276836"
     Region          <1477..1750
                     /region_name="PTZ00108"
                     /note="DNA topoisomerase 2-like protein; Provisional"
                     /db_xref="CDD:240271"
     Region          2059..2116
                     /region_name="C1_Myosin-IXa"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in unconventional myosin-IXa and similar proteins;
                     cd20883"
                     /db_xref="CDD:410433"
     Region          2125..2310
                     /region_name="RhoGAP_myosin_IX"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in class IX myosins. Class
                     IX myosins contain a characteristic head domain, a neck
                     domain, a tail domain which contains a C6H2-zinc binding
                     motif and a RhoGAP domain. Class...; cd04377"
                     /db_xref="CDD:239842"
     Site            order(2162,2199,2203,2272,2275..2276,2301)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239842"
     Site            2162
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239842"
     CDS             1..2630
                     /gene="MYO9A"
                     /coded_by="XM_061157941.1:445..8337"
                     /db_xref="GeneID:133066651"
ORIGIN      
        1 mnindggrrr fednehtlri ypgtisegti ycpiparkns taaevidsli nklhldktkc
       61 yvlaevkefg geewilnptd cpvqrmmlwp rmalenrlsg edyrfllrek nldgsihygs
      121 lqswlrvtee rrrmmergfl pqpqqkdfdd lcslpdlnek tllenlrnrf khekiytyvg
      181 siliainpfk flpiynpkyv kmydnhqlgk lephiyavad vayhamlqrk knqcivisge
      241 sgsgktqstn flihhltals qkgfasgveq iilgagpvle afgnaktahn nnssrfgkfi
      301 qvnyqetgtv lgayvekyll eksrlvyqeh nernyhvfyy llagaseeer lafhlkqpee
      361 yhylnqdcft vegedlrhdf erlqlamemv gflpktrrqi fsllsailhl gnicykkkty
      421 rddsidicnp evlpvvsell evkeemlfea lvtrktvtvg eklilpykla eavtvrnsma
      481 kslysalfdw ivfrinhalm nskdleqntk tlsigvldif gfedyennsf eqfcinfane
      541 rlqhyfnqhi fkleqeeyrt egiswhnidy idntccinli skkptgllhl ldeesnfpqa
      601 tnqtlldkfk hqheensyie fpavmepafi ikhyagkvky gvkdfreknt dhmrpdival
      661 lrssknafis gmigidpvav frwsvlraff ramvafreag krhiqrktgh ddtapcavlk
      721 smdsisflqh pvhqrsleil qrckeekysi trknprtpls dlqgmntlne knqhetfdfa
      781 wngrtgirqs klssntslld kdgifansas skllerahgi ltrnknfksk pglpkhllev
      841 kslkhltrlt lqdritksll hlhkkkkpps isaqfqasls klmetlgqae pyfvkcirsn
      901 aeklplrfsd alvlrqlryt gmletvrirq sgysckysfq dfvshfhvll prniipskfn
      961 iqdffrkinl npdnyqvgks mvflkeqerq hlqdllhqev lrriillqrw frvllcrqhf
     1021 lhlrqasvvi qqfwrnyvhq kqardaavqk dalllasaat llqaswrahl erqrylelrt
     1081 aavviqqrwr krcrrrhlaa vciqarwrgy reskryqeqr nkiillqsly rgfrarqrfk
     1141 slkeqrvkea klelglasik pygtleihgs dpskwedcsf dsrvkaieec ksviesnris
     1201 hessmdclne spnkrqerar sqsgvdlqen vivrerpksl edlhqkkvsr akresrrmre
     1261 leqaifslel lkvrslggvs pseerrwste lmpeglrslq gtpdsesshg slellscees
     1321 qkskpepiit derdlpfvpp evscspdfep qdysvsatse tnytltqrgp psdsvhlkng
     1381 amkeklvcss esitckpqlr dpfisnslpt ffyiphqdpl ktssqldtsv qrskllesee
     1441 tlpsltldis reagkyhlpg enqvvaslnt dssntvlkkl eklntekeer qkqlqqqnek
     1501 emmkqirrqk dilekerkaf ktiekprtge sflvpsfhqs kqrierpssl lilktpnkde
     1561 essmvgtpsv tikdsvlapk dspsthlplk drpvtlffer kggpgqshtv kelsktdrvs
     1621 tqlnvackhs hsriskrehl rpaqpcshks ddpfrdaatk aifftpkenm ssslvtmeal
     1681 nsgnpqlqkq deptwkpvkl tgpgqgeqva rpahkkkarm artrsdfltr gtfadgegdt
     1741 eeddyddiie pllspdqash selgpapslg qashsdsemt sqrfssvdee aklhktmsqg
     1801 eitklavrqk tsdsdirpqr akmrfwakgk qgekkttrgk pdthsevsaf fagsdmipah
     1861 qfpdelshnh ptpplspelp gscrkefken kepspkarrr rsvkissval esmhwqndsv
     1921 qiiasasdlk smdefllkkm ndldnedskk dtlvdvvfkk alkefrqnif sfyssalavd
     1981 dgksirykdl yalfeqilek tmrleqrdws espvrvwvnt fkvfldeymn efktleyipt
     2041 kvpkterkkr rkkesdlvee hnghifkatq ysiptyceyc ssliwimdra svcklckyac
     2101 hkkccpktta kcskkydpel ssrqfgvels rltsedrtvp lvveklinyi emhglytegi
     2161 yrksgstnki kelrqgldtd aenvnlddyn ihviasvfkq wlrdlpnplm tfelyeeflr
     2221 amglqerket irgvysvidq lsrthlntle rlifhlvria lqedtnrmsa nalaivfapc
     2281 ilrcpdtidp lqsvqdiskt ttcvelivve qmnkykarlk disslefaen kaktrlslir
     2341 rsmkpvliav rfmsitrssv sgkgrlrrgn ypcpsspavv rlpsmsdvte etltseaald
     2401 tditeqqqaa mqqeervlte qienlqkeke eltfemlvle prasddetle seasigtads
     2461 senlnieseg aiseksersl alistkaagk sepssklrkq lkkqqdslds vdssvsslcs
     2521 sgtasshgtr rrfqiysksp fyrassagea lgmegpsgqt ksledkpqfi srgtfnpekg
     2581 kqklknvkns pqktketpeg ivvsgrrktv dpdcssaqql alfgnnefmv
//
LOCUS       XP_061013925            2560 aa            linear   MAM 02-DEC-2023
DEFINITION  unconventional myosin-IXa isoform X6 [Dama dama].
ACCESSION   XP_061013925
VERSION     XP_061013925.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157942.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2560
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2560
                     /product="unconventional myosin-IXa isoform X6"
                     /calculated_mol_wt=294044
     Region          15..110
                     /region_name="RA_Myosin-IXa"
                     /note="Ras-associating (RA) domain found in Myosin-IXa;
                     cd17216"
                     /db_xref="CDD:340736"
     Region          160..1005
                     /region_name="MYSc_Myo9"
                     /note="class IX myosin, motor domain; cd01385"
                     /db_xref="CDD:276836"
     Site            order(187..195,239..246,285..295,538..543)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276836"
     Site            187..195
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276836"
     Site            239..246
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276836"
     Site            285..295
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276836"
     Site            481
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:276836"
     Site            538..543
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276836"
     Site            order(567..578,581..590)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276836"
     Site            941..950
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276836"
     Site            order(953..980,984..1005)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276836"
     Region          2007..2064
                     /region_name="C1_Myosin-IXa"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in unconventional myosin-IXa and similar proteins;
                     cd20883"
                     /db_xref="CDD:410433"
     Region          2073..2258
                     /region_name="RhoGAP_myosin_IX"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in class IX myosins. Class
                     IX myosins contain a characteristic head domain, a neck
                     domain, a tail domain which contains a C6H2-zinc binding
                     motif and a RhoGAP domain. Class...; cd04377"
                     /db_xref="CDD:239842"
     Site            order(2110,2147,2151,2220,2223..2224,2249)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239842"
     Site            2110
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239842"
     CDS             1..2560
                     /gene="MYO9A"
                     /coded_by="XM_061157942.1:445..8127"
                     /db_xref="GeneID:133066651"
ORIGIN      
        1 mnindggrrr fednehtlri ypgtisegti ycpiparkns taaevidsli nklhldktkc
       61 yvlaevkefg geewilnptd cpvqrmmlwp rmalenrlsg edyrfllrek nldgsihygs
      121 lqswlrvtee rrrmmergfl pqpqqkdfdd lcslpdlnek tllenlrnrf khekiytyvg
      181 siliainpfk flpiynpkyv kmydnhqlgk lephiyavad vayhamlqrk knqcivisge
      241 sgsgktqstn flihhltals qkgfasgveq iilgagpvle afgnaktahn nnssrfgkfi
      301 qvnyqetgtv lgayvekyll eksrlvyqeh nernyhvfyy llagaseeer lafhlkqpee
      361 yhylnqitkk plrqswddyc fdsepqdcft vegedlrhdf erlqlamemv gflpktrrqi
      421 fsllsailhl gnicykkkty rddsidicnp evlpvvsell evkeemlfea lvtrktvtvg
      481 eklilpykla eavtvrnsma kslysalfdw ivfrinhalm nskdleqntk tlsigvldif
      541 gfedyennsf eqfcinfane rlqhyfnqhi fkleqeeyrt egiswhnidy idntccinli
      601 skkptgllhl ldeesnfpqa tnqtlldkfk hqheensyie fpavmepafi ikhyagkvky
      661 gvkdfreknt dhmrpdival lrssknafis gmigidpvav frwsvlraff ramvafreag
      721 krhiqrktgh ddtapcavlk smdsisflqh pvhqrsleil qrckeekysi trknprtpls
      781 dlqgmntlne knqhetfdfa wngrtgirqs klssntslld kdgifansas skllerahgi
      841 ltrnknfksk pglpkhllev kslkhltrlt lqdritksll hlhkkkkpps isaqfqasls
      901 klmetlgqae pyfvkcirsn aeklplrfsd alvlrqlryt gmletvrirq sgysckysfq
      961 dfvshfhvll prniipskfn iqdffrkinl npdnyqvgks mvflkeqerq hlqdllhqev
     1021 lrriillqrw frvllcrqhf lhlrqasvvi qqfwrnyvhq kqardaavqk dalllasaat
     1081 llqaswrahl erqrylelrt aavviqqrwr krcrrrhlaa vciqarwrgy reskryqeqr
     1141 nkiillqsly rgfrarqrfk slkeqrvkea klelglasik pygtleihgs dpskwedcsf
     1201 dsrvkaieec ksviesnris hessmdclne spnkrqerar sqsgvdlqen vivrerpksl
     1261 edlhqkkvsr akresrrmre leqaifslel lkvrslggvs pseerrwste lmpeglrslq
     1321 gtpdsesshg slellscees qkskpepiit derdlpfvpp evscspdfep qdysvsatse
     1381 tnytltqrgp psdsvhlkng amkeklvcss esitckpqlr dpfisnslpt ffyiphqdpl
     1441 ktssqldtsv qrskllesee tlpsltldis reagkyhlpg enqvvaslnt dssntvlkkl
     1501 eklntekeer qkqlqqqnek emmkqirrqk dilekerkaf ktiekprtge sflvpsfhqs
     1561 kqrierpssl lilktpnkde essmvgtpsv tikdsvlapk dspsthlplk drpvtlffer
     1621 kggpgqshtv kelsktdrvs tqlnvackhs hsriskrehl rpaqpcshks ddpfrdaatk
     1681 aifftpkenm ssslvtmeal nsgnpqlqkq deptwkpvkl tgpgqgetsq rfssvdeeak
     1741 lhktmsqgei tklavrqkts dsdirpqrak mrfwakgkqg ekkttrgkpd thsevsaffa
     1801 gsdmipahqf pdelshnhpt pplspelpgs crkefkenke pspkarrrrs vkissvales
     1861 mhwqndsvqi iasasdlksm defllkkmnd ldnedskkdt lvdvvfkkal kefrqnifsf
     1921 yssalavddg ksirykdlya lfeqilektm rleqrdwses pvrvwvntfk vfldeymnef
     1981 ktleyiptkv pkterkkrrk kesdlveehn ghifkatqys iptyceycss liwimdrasv
     2041 cklckyachk kccpkttakc skkydpelss rqfgvelsrl tsedrtvplv veklinyiem
     2101 hglytegiyr ksgstnkike lrqgldtdae nvnlddynih viasvfkqwl rdlpnplmtf
     2161 elyeeflram glqerketir gvysvidqls rthlntlerl ifhlvrialq edtnrmsana
     2221 laivfapcil rcpdtidplq svqdiskttt cvelivveqm nkykarlkdi sslefaenka
     2281 ktrlslirrs mgkgrlrrgn ypcpsspavv rlpsmsdvte etltseaald tditeqqqaa
     2341 mqqeervlte qienlqkeke eltfemlvle prasddetle seasigtads senlnieseg
     2401 aiseksersl alistkaagk sepssklrkq lkkqqdslds vdssvsslcs sgtasshgtr
     2461 rrfqiysksp fyrassagea lgmegpsgqt ksledkpqfi srgtfnpekg kqklknvkns
     2521 pqktketpeg ivvsgrrktv dpdcssaqql alfgnnefmv
//
LOCUS       XP_061013926            2559 aa            linear   MAM 02-DEC-2023
DEFINITION  unconventional myosin-IXa isoform X7 [Dama dama].
ACCESSION   XP_061013926
VERSION     XP_061013926.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157943.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2559
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2559
                     /product="unconventional myosin-IXa isoform X7"
                     /calculated_mol_wt=293916
     Region          15..110
                     /region_name="RA_Myosin-IXa"
                     /note="Ras-associating (RA) domain found in Myosin-IXa;
                     cd17216"
                     /db_xref="CDD:340736"
     Region          160..1004
                     /region_name="MYSc_Myo9"
                     /note="class IX myosin, motor domain; cd01385"
                     /db_xref="CDD:276836"
     Site            order(187..195,239..246,285..295,537..542)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276836"
     Site            187..195
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276836"
     Site            239..246
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276836"
     Site            285..295
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276836"
     Site            480
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:276836"
     Site            537..542
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276836"
     Site            order(566..577,580..589)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276836"
     Site            940..949
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276836"
     Site            order(952..979,983..1004)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276836"
     Region          2006..2063
                     /region_name="C1_Myosin-IXa"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in unconventional myosin-IXa and similar proteins;
                     cd20883"
                     /db_xref="CDD:410433"
     Region          2072..2257
                     /region_name="RhoGAP_myosin_IX"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in class IX myosins. Class
                     IX myosins contain a characteristic head domain, a neck
                     domain, a tail domain which contains a C6H2-zinc binding
                     motif and a RhoGAP domain. Class...; cd04377"
                     /db_xref="CDD:239842"
     Site            order(2109,2146,2150,2219,2222..2223,2248)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239842"
     Site            2109
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239842"
     CDS             1..2559
                     /gene="MYO9A"
                     /coded_by="XM_061157943.1:445..8124"
                     /db_xref="GeneID:133066651"
ORIGIN      
        1 mnindggrrr fednehtlri ypgtisegti ycpiparkns taaevidsli nklhldktkc
       61 yvlaevkefg geewilnptd cpvqrmmlwp rmalenrlsg edyrfllrek nldgsihygs
      121 lqswlrvtee rrrmmergfl pqpqqkdfdd lcslpdlnek tllenlrnrf khekiytyvg
      181 siliainpfk flpiynpkyv kmydnhqlgk lephiyavad vayhamlqrk knqcivisge
      241 sgsgktqstn flihhltals qkgfasgveq iilgagpvle afgnaktahn nnssrfgkfi
      301 qvnyqetgtv lgayvekyll eksrlvyqeh nernyhvfyy llagaseeer lafhlkqpee
      361 yhylnqitkk plrqswddyc fdsepdcftv egedlrhdfe rlqlamemvg flpktrrqif
      421 sllsailhlg nicykkktyr ddsidicnpe vlpvvselle vkeemlfeal vtrktvtvge
      481 klilpyklae avtvrnsmak slysalfdwi vfrinhalmn skdleqntkt lsigvldifg
      541 fedyennsfe qfcinfaner lqhyfnqhif kleqeeyrte giswhnidyi dntccinlis
      601 kkptgllhll deesnfpqat nqtlldkfkh qheensyief pavmepafii khyagkvkyg
      661 vkdfrekntd hmrpdivall rssknafisg migidpvavf rwsvlraffr amvafreagk
      721 rhiqrktghd dtapcavlks mdsisflqhp vhqrsleilq rckeekysit rknprtplsd
      781 lqgmntlnek nqhetfdfaw ngrtgirqsk lssntslldk dgifansass kllerahgil
      841 trnknfkskp glpkhllevk slkhltrltl qdritksllh lhkkkkppsi saqfqaslsk
      901 lmetlgqaep yfvkcirsna eklplrfsda lvlrqlrytg mletvrirqs gysckysfqd
      961 fvshfhvllp rniipskfni qdffrkinln pdnyqvgksm vflkeqerqh lqdllhqevl
     1021 rriillqrwf rvllcrqhfl hlrqasvviq qfwrnyvhqk qardaavqkd alllasaatl
     1081 lqaswrahle rqrylelrta avviqqrwrk rcrrrhlaav ciqarwrgyr eskryqeqrn
     1141 kiillqslyr gfrarqrfks lkeqrvkeak lelglasikp ygtleihgsd pskwedcsfd
     1201 srvkaieeck sviesnrish essmdclnes pnkrqerars qsgvdlqenv ivrerpksle
     1261 dlhqkkvsra kresrrmrel eqaifslell kvrslggvsp seerrwstel mpeglrslqg
     1321 tpdsesshgs lellsceesq kskpepiitd erdlpfvppe vscspdfepq dysvsatset
     1381 nytltqrgpp sdsvhlknga mkeklvcsse sitckpqlrd pfisnslptf fyiphqdplk
     1441 tssqldtsvq rsklleseet lpsltldisr eagkyhlpge nqvvaslntd ssntvlkkle
     1501 klntekeerq kqlqqqneke mmkqirrqkd ilekerkafk tiekprtges flvpsfhqsk
     1561 qrierpssll ilktpnkdee ssmvgtpsvt ikdsvlapkd spsthlplkd rpvtlfferk
     1621 ggpgqshtvk elsktdrvst qlnvackhsh sriskrehlr paqpcshksd dpfrdaatka
     1681 ifftpkenms sslvtmealn sgnpqlqkqd eptwkpvklt gpgqgetsqr fssvdeeakl
     1741 hktmsqgeit klavrqktsd sdirpqrakm rfwakgkqge kkttrgkpdt hsevsaffag
     1801 sdmipahqfp delshnhptp plspelpgsc rkefkenkep spkarrrrsv kissvalesm
     1861 hwqndsvqii asasdlksmd efllkkmndl dnedskkdtl vdvvfkkalk efrqnifsfy
     1921 ssalavddgk sirykdlyal feqilektmr leqrdwsesp vrvwvntfkv fldeymnefk
     1981 tleyiptkvp kterkkrrkk esdlveehng hifkatqysi ptyceycssl iwimdrasvc
     2041 klckyachkk ccpkttakcs kkydpelssr qfgvelsrlt sedrtvplvv eklinyiemh
     2101 glytegiyrk sgstnkikel rqgldtdaen vnlddynihv iasvfkqwlr dlpnplmtfe
     2161 lyeeflramg lqerketirg vysvidqlsr thlntlerli fhlvrialqe dtnrmsanal
     2221 aivfapcilr cpdtidplqs vqdisktttc velivveqmn kykarlkdis slefaenkak
     2281 trlslirrsm gkgrlrrgny pcpsspavvr lpsmsdvtee tltseaaldt diteqqqaam
     2341 qqeervlteq ienlqkekee ltfemlvlep rasddetles easigtadss enlniesega
     2401 iseksersla listkaagks epssklrkql kkqqdsldsv dssvsslcss gtasshgtrr
     2461 rfqiyskspf yrassageal gmegpsgqtk sledkpqfis rgtfnpekgk qklknvknsp
     2521 qktketpegi vvsgrrktvd pdcssaqqla lfgnnefmv
//
LOCUS       XP_061013928            2648 aa            linear   MAM 02-DEC-2023
DEFINITION  unconventional myosin-IXa isoform X8 [Dama dama].
ACCESSION   XP_061013928
VERSION     XP_061013928.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157945.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2648
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2648
                     /product="unconventional myosin-IXa isoform X8"
                     /calculated_mol_wt=303584
     Region          15..110
                     /region_name="RA_Myosin-IXa"
                     /note="Ras-associating (RA) domain found in Myosin-IXa;
                     cd17216"
                     /db_xref="CDD:340736"
     Region          160..1004
                     /region_name="MYSc_Myo9"
                     /note="class IX myosin, motor domain; cd01385"
                     /db_xref="CDD:276836"
     Site            order(187..195,239..246,285..295,537..542)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276836"
     Site            187..195
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276836"
     Site            239..246
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276836"
     Site            285..295
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276836"
     Site            480
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:276836"
     Site            537..542
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276836"
     Site            order(566..577,580..589)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276836"
     Site            940..949
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276836"
     Site            order(952..979,983..1004)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276836"
     Region          2077..2134
                     /region_name="C1_Myosin-IXa"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in unconventional myosin-IXa and similar proteins;
                     cd20883"
                     /db_xref="CDD:410433"
     Region          2143..2328
                     /region_name="RhoGAP_myosin_IX"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in class IX myosins. Class
                     IX myosins contain a characteristic head domain, a neck
                     domain, a tail domain which contains a C6H2-zinc binding
                     motif and a RhoGAP domain. Class...; cd04377"
                     /db_xref="CDD:239842"
     Site            order(2180,2217,2221,2290,2293..2294,2319)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239842"
     Site            2180
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239842"
     CDS             1..2648
                     /gene="MYO9A"
                     /coded_by="XM_061157945.1:445..8391"
                     /db_xref="GeneID:133066651"
ORIGIN      
        1 mnindggrrr fednehtlri ypgtisegti ycpiparkns taaevidsli nklhldktkc
       61 yvlaevkefg geewilnptd cpvqrmmlwp rmalenrlsg edyrfllrek nldgsihygs
      121 lqswlrvtee rrrmmergfl pqpqqkdfdd lcslpdlnek tllenlrnrf khekiytyvg
      181 siliainpfk flpiynpkyv kmydnhqlgk lephiyavad vayhamlqrk knqcivisge
      241 sgsgktqstn flihhltals qkgfasgveq iilgagpvle afgnaktahn nnssrfgkfi
      301 qvnyqetgtv lgayvekyll eksrlvyqeh nernyhvfyy llagaseeer lafhlkqpee
      361 yhylnqitkk plrqswddyc fdsepdcftv egedlrhdfe rlqlamemvg flpktrrqif
      421 sllsailhlg nicykkktyr ddsidicnpe vlpvvselle vkeemlfeal vtrktvtvge
      481 klilpyklae avtvrnsmak slysalfdwi vfrinhalmn skdleqntkt lsigvldifg
      541 fedyennsfe qfcinfaner lqhyfnqhif kleqeeyrte giswhnidyi dntccinlis
      601 kkptgllhll deesnfpqat nqtlldkfkh qheensyief pavmepafii khyagkvkyg
      661 vkdfrekntd hmrpdivall rssknafisg migidpvavf rwsvlraffr amvafreagk
      721 rhiqrktghd dtapcavlks mdsisflqhp vhqrsleilq rckeekysit rknprtplsd
      781 lqgmntlnek nqhetfdfaw ngrtgirqsk lssntslldk dgifansass kllerahgil
      841 trnknfkskp glpkhllevk slkhltrltl qdritksllh lhkkkkppsi saqfqaslsk
      901 lmetlgqaep yfvkcirsna eklplrfsda lvlrqlrytg mletvrirqs gysckysfqd
      961 fvshfhvllp rniipskfni qdffrkinln pdnyqvgksm vflkeqerqh lqdllhqevl
     1021 rriillqrwf rvllcrqhfl hlrqasvviq qfwrnyvhqk qardaavqkd alllasaatl
     1081 lqaswrahle rqrylelrta avviqqrwrk rcrrrhlaav ciqarwrgyr eskryqeqrn
     1141 kiillqslyr gfrarqrfks lkeqrvkeak lelglasikp ygtleihgsd pskwedcsfd
     1201 srvkaieeck sviesnrish essmdclnes pnkrqerars qsgvdlqenv ivrerpksle
     1261 dlhqkkvsra kresrrmrel eqaifslell kvrslggvsp seerrwstel mpeglrslqg
     1321 tpdsesshgs lellsceesq kskpepiitd erdlpfvppe vscspdfepq dysvsatset
     1381 nytltqrgpp sdsvhlknga mkeklvcsse sitckpqlrd pfisnslptf fyiphqdplk
     1441 tssqldtsvq rsklleseet lpsltldisr eagkyhlpge nqvvaslntd ssntvlkkle
     1501 klntekeerq kqlqqqneke mmkqirrqkd ilekerkafk tiekprtges flvpsfhqsk
     1561 qrierpssll ilktpnkdee ssmvgtpsvt ikdsvlapkd spsthlplkd rpvtlfferk
     1621 ggpgqshtvk elsktdrvst qlnvackhsh sriskrehlr paqpcshksd dpfrdaatka
     1681 ifftpkenms sslvtmealn sgnpqlqkqd eptwkpvklt gpgqgevarp ahkkkarmar
     1741 trsdfltrgt fadgegdtee ddyddiiepl lspdqashse lgpapslgqa shsdsemtsq
     1801 rfssvdeeak lhktmsqgei tklavrqkts dsdirpqrak mrfwakgkqg ekkttrgkpd
     1861 thsevsaffa gsdmipahqf pdelshnhpt pplspelpgs crkefkenke pspkarrrrs
     1921 vkissvales mhwqndsvqi iasasdlksm defllkkmnd ldnedskkdt lvdvvfkkal
     1981 kefrqnifsf yssalavddg ksirykdlya lfeqilektm rleqrdwses pvrvwvntfk
     2041 vfldeymnef ktleyiptkv pkterkkrrk kesdlveehn ghifkatqys iptyceycss
     2101 liwimdrasv cklckyachk kccpkttakc skkydpelss rqfgvelsrl tsedrtvplv
     2161 veklinyiem hglytegiyr ksgstnkike lrqgldtdae nvnlddynih viasvfkqwl
     2221 rdlpnplmtf elyeeflram glqerketir gvysvidqls rthlntlerl ifhlvrialq
     2281 edtnrmsana laivfapcil rcpdtidplq svqdiskttt cvelivveqm nkykarlkdi
     2341 sslefaenka ktrlslirrs mkpvliavrf msitrssvsg kgrlrrgnyp cpsspavvrl
     2401 psmsdvteet ltseaaldtd iteqqqaamq qeervlteqi enlqkekeel tfemlvlepr
     2461 asddetlese asigtadsse nlniesegai sekserslal istkaagkse pssklrkqlk
     2521 kqqdsldsvd ssvsslcssg tasshgtrrr fqiyskspfy rassagealg megpsgqtks
     2581 ledkpqfisr gtfnpekgkq klknvknspq ktketpegiv vsgrrktvdp dcssaqqlal
     2641 fgnnefmv
//
LOCUS       XP_061013929             212 aa            linear   MAM 02-DEC-2023
DEFINITION  sentrin-specific protease 8 [Dama dama].
ACCESSION   XP_061013929
VERSION     XP_061013929.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157946.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..212
                     /product="sentrin-specific protease 8"
                     /calculated_mol_wt=24004
     Region          26..188
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     cl23802"
                     /db_xref="CDD:420019"
     CDS             1..212
                     /gene="SENP8"
                     /coded_by="XM_061157946.1:191..829"
                     /db_xref="GeneID:133066653"
ORIGIN      
        1 mdpvvlsymd sllrqsdvsl ldppswlndh vigfafeyfa nsqfhdcsdh vcfispevtq
       61 fikctgnpae iamflepldl pnkrviflai ndnsnhaagg thwsllvylq dkngffhyds
      121 ygssntlhak qvaekleafl grkgnklafv eekapaqqns ydcgmyvicn tealcqnffr
      181 qqpesllqll tptyitkkre ewkdliarla kn
//
LOCUS       XP_061013930            1063 aa            linear   MAM 02-DEC-2023
DEFINITION  thrombospondin type-1 domain-containing protein 4 isoform X1 [Dama
            dama].
ACCESSION   XP_061013930
VERSION     XP_061013930.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157947.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1063
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1063
                     /product="thrombospondin type-1 domain-containing protein
                     4 isoform X1"
                     /calculated_mol_wt=116583
     Region          104..>141
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          <134..333
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          362..456
                     /region_name="ADAMTS_CR_3"
                     /note="ADAMTS cysteine-rich domain; pfam19236"
                     /db_xref="CDD:437068"
     Region          458..573
                     /region_name="ADAMTS_spacer1"
                     /note="ADAM-TS Spacer 1; pfam05986"
                     /db_xref="CDD:461796"
     Region          672..721
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          725..781
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          784..838
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          842..895
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          901..957
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          961..1012
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1020..1050
                     /region_name="PLAC"
                     /note="PLAC (protease and lacunin) domain; pfam08686"
                     /db_xref="CDD:462560"
     CDS             1..1063
                     /gene="THSD4"
                     /coded_by="XM_061157947.1:72..3263"
                     /db_xref="GeneID:133066654"
ORIGIN      
        1 mpasllclap sgaltnlrir vehhphlqki gniseepllf pgtprimvsc fmeslsvlgs
       61 llliglqlvc pqpstehrkv pqrmavaega pedggggapg vwgswgpwsa csrscsggvm
      121 eqtrpclpss yrarggprpg aparafaghv vsavrtsvpl hrsreetrap aglnssrqgp
      181 alrgsrhpqa rgreptaerr srtrgpigpg kygygkapyi lplqtdsahp pqrlrrqrps
      241 srnsrsqgas gsshgyhpsa hqapqhgply qsdsgphsgl qasegsvyql plthdqgfpa
      301 asslfhsqea ssspglgapr aaqsfsqptr staiscigay rqyklcntnv cpessrsiwe
      361 vqcasynnkp fmgrfyewep faevkgnrkc elncqamgyr fyvrqaekvi dgtpcdqngt
      421 aicvsgqcks igcddylgsd kvvdkcgvcg gdntgcqvvs gvfkhaltsl gyhrvveipq
      481 gatkinitem yksnnylalr srsgrsiing nwaidrpgky egggtmftyk rpneisstag
      541 esflaegptn eildvymihq qpnpgvhyey vimgnnaisp qvpphrrpge pfngqlvpeg
      601 rsqqegkeke gdqekadahg gapemftses aqtfpvrqpd rfsphradsv vppaaqaprr
      661 srdhnwkqlg tsecsttcgk gsqypifrcv hrntheevpe sycdstmkpt peeepcnifp
      721 cpafwdigew secsktcglg mqhrqvlcrq vyanrsltvq pyrcqhlekp dtastcqlki
      781 csewqirtdw tscsvpcgvg qrtrdvkcvs nigdvvddee cnmklrpndi encdmgpcak
      841 swfltewser csaecgagvr trsvvcmtnh vgslplegcg snrpadatpc dngpctgkve
      901 wfagswsqcs iecgsgtqqr evicvrkntd tfevldpyec sflekppsqq pchlkpcgak
      961 wfntewsmcs kscqggfrvr evrcladdmt lsnlcdpqmk peekescnpq dcvpevdenc
     1021 kdryyncnvv vqarlcvyny yktaccasct rvanrhsgfl gsr
//
LOCUS       XP_061013931            1017 aa            linear   MAM 02-DEC-2023
DEFINITION  thrombospondin type-1 domain-containing protein 4 isoform X2 [Dama
            dama].
ACCESSION   XP_061013931
VERSION     XP_061013931.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157948.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1017
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1017
                     /product="thrombospondin type-1 domain-containing protein
                     4 isoform X2"
                     /calculated_mol_wt=111562
     Region          58..>95
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          <88..287
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          316..410
                     /region_name="ADAMTS_CR_3"
                     /note="ADAMTS cysteine-rich domain; pfam19236"
                     /db_xref="CDD:437068"
     Region          412..527
                     /region_name="ADAMTS_spacer1"
                     /note="ADAM-TS Spacer 1; pfam05986"
                     /db_xref="CDD:461796"
     Region          626..675
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          679..735
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          738..792
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          796..849
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          855..911
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          915..966
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          974..1004
                     /region_name="PLAC"
                     /note="PLAC (protease and lacunin) domain; pfam08686"
                     /db_xref="CDD:462560"
     CDS             1..1017
                     /gene="THSD4"
                     /coded_by="XM_061157948.1:173..3226"
                     /db_xref="GeneID:133066654"
ORIGIN      
        1 mvscfmesls vlgsllligl qlvcpqpste hrkvpqrmav aegapedggg gapgvwgswg
       61 pwsacsrscs ggvmeqtrpc lpssyrargg prpgaparaf aghvvsavrt svplhrsree
      121 trapaglnss rqgpalrgsr hpqargrept aerrsrtrgp igpgkygygk apyilplqtd
      181 sahppqrlrr qrpssrnsrs qgasgsshgy hpsahqapqh gplyqsdsgp hsglqasegs
      241 vyqlplthdq gfpaasslfh sqeassspgl gapraaqsfs qptrstaisc igayrqyklc
      301 ntnvcpessr siwevqcasy nnkpfmgrfy ewepfaevkg nrkcelncqa mgyrfyvrqa
      361 ekvidgtpcd qngtaicvsg qcksigcddy lgsdkvvdkc gvcggdntgc qvvsgvfkha
      421 ltslgyhrvv eipqgatkin itemyksnny lalrsrsgrs iingnwaidr pgkyegggtm
      481 ftykrpneis stagesflae gptneildvy mihqqpnpgv hyeyvimgnn aispqvpphr
      541 rpgepfngql vpegrsqqeg kekegdqeka dahggapemf tsesaqtfpv rqpdrfsphr
      601 adsvvppaaq aprrsrdhnw kqlgtsecst tcgkgsqypi frcvhrnthe evpesycdst
      661 mkptpeeepc nifpcpafwd igewsecskt cglgmqhrqv lcrqvyanrs ltvqpyrcqh
      721 lekpdtastc qlkicsewqi rtdwtscsvp cgvgqrtrdv kcvsnigdvv ddeecnmklr
      781 pndiencdmg pcakswflte wsercsaecg agvrtrsvvc mtnhvgslpl egcgsnrpad
      841 atpcdngpct gkvewfagsw sqcsiecgsg tqqrevicvr kntdtfevld pyecsflekp
      901 psqqpchlkp cgakwfntew smcskscqgg frvrevrcla ddmtlsnlcd pqmkpeekes
      961 cnpqdcvpev denckdryyn cnvvvqarlc vynyyktacc asctrvanrh sgflgsr
//
LOCUS       XP_061013932             751 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat-containing protein 49 isoform X1 [Dama dama].
ACCESSION   XP_061013932
VERSION     XP_061013932.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157949.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..751
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..751
                     /product="leucine-rich repeat-containing protein 49
                     isoform X1"
                     /calculated_mol_wt=85528
     Region          160..177
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          180..201
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          183..379
                     /region_name="PPP1R42"
                     /note="protein phosphatase 1 regulatory subunit 42;
                     cl42388"
                     /db_xref="CDD:455733"
     Region          202..223
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          224..245
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          246..267
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          268..289
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          290..311
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          312..336
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..751
                     /gene="LRRC49"
                     /coded_by="XM_061157949.1:284..2539"
                     /db_xref="GeneID:133066655"
ORIGIN      
        1 mipgkyrsvs graasnvncg lhlviqtssl peknkvefkl nretpsfpgr llqhdlerny
       61 ssrqgdgrvi spslhnkssc issttnvtel cglemktats slsafgdssi qtpsksrirq
      121 gchsagpnvs gdhinlvsss mpsfpilqrs seekilysdr ltlerqkltv cpiidgeehl
      181 rllnfqhnsi tqiqnisnlq rlifldlydn qieeisglst lrslrvlllg knrikkisnl
      241 enlksldvld lhgnqitkie nvnhlcdlrv lnlarnflsh vdnlngldsl telnlrhnqi
      301 tfvrdvdnlp clqrlflsfn nistfesvcc ladstslsdi tfdgnpiaqe swykhtilqn
      361 mmqlrqldmk riteeerrma svvakkeeek kreshkqsll kekkrltinn varkwdlqqh
      421 ritsiainqd rrdsdsqdhc qndgstvstf peeagsldsg ltsalqglsv tdthlvevdg
      481 dtlslygsga lecldrnwsv qtagmvttvs ftfiefdeiv qvlpklkikf pnslhlkfke
      541 tnlvmlqqfn alaqlrrvdq ltidpqgnpv vsftlwkyyv lfrlshfnmq kingtevtqn
      601 dmimaerlfg ilahvassel pqyrlisilg darkkqfryl letkgkkpgi vseenndskr
      661 lvgentnrat lnyttrdfyt ekleeikekk kfckmyiedl vkeateinmk nealqklwpq
      721 mfielvrdav ieirnknsym klclqqitdq k
//
LOCUS       XP_061013933             685 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat-containing protein 49 isoform X2 [Dama dama].
ACCESSION   XP_061013933
VERSION     XP_061013933.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157950.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..685
                     /product="leucine-rich repeat-containing protein 49
                     isoform X2"
                     /calculated_mol_wt=78763
     Region          94..111
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          114..135
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          117..313
                     /region_name="PPP1R42"
                     /note="protein phosphatase 1 regulatory subunit 42;
                     cl42388"
                     /db_xref="CDD:455733"
     Region          136..157
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          158..179
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          180..201
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          202..223
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          224..245
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          246..270
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..685
                     /gene="LRRC49"
                     /coded_by="XM_061157950.1:284..2341"
                     /db_xref="GeneID:133066655"
ORIGIN      
        1 mipgkyrsvs graasnvncg lhlviqtssl peknkvefkl nretpsfpgr llqhdlerny
       61 ssrqgdhinl vsssmpsfpi lqrsseekil ysdrltlerq kltvcpiidg eehlrllnfq
      121 hnsitqiqni snlqrlifld lydnqieeis glstlrslrv lllgknrikk isnlenlksl
      181 dvldlhgnqi tkienvnhlc dlrvlnlarn flshvdnlng ldsltelnlr hnqitfvrdv
      241 dnlpclqrlf lsfnnistfe svccladsts lsditfdgnp iaqeswykht ilqnmmqlrq
      301 ldmkriteee rrmasvvakk eeekkreshk qsllkekkrl tinnvarkwd lqqhritsia
      361 inqdrrdsds qdhcqndgst vstfpeeags ldsgltsalq glsvtdthlv evdgdtlsly
      421 gsgalecldr nwsvqtagmv ttvsftfief deivqvlpkl kikfpnslhl kfketnlvml
      481 qqfnalaqlr rvdqltidpq gnpvvsftlw kyyvlfrlsh fnmqkingte vtqndmimae
      541 rlfgilahva sselpqyrli silgdarkkq frylletkgk kpgivseenn dskrlvgent
      601 nratlnyttr dfytekleei kekkkfckmy iedlvkeate inmknealqk lwpqmfielv
      661 rdavieirnk nsymklclqq itdqk
//
LOCUS       XP_061013934             657 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat-containing protein 49 isoform X3 [Dama dama].
ACCESSION   XP_061013934
VERSION     XP_061013934.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157951.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..657
                     /product="leucine-rich repeat-containing protein 49
                     isoform X3"
                     /calculated_mol_wt=75202
     Region          66..83
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          86..107
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          89..285
                     /region_name="PPP1R42"
                     /note="protein phosphatase 1 regulatory subunit 42;
                     cl42388"
                     /db_xref="CDD:455733"
     Region          108..129
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          130..151
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          152..173
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          174..195
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          196..217
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          218..242
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..657
                     /gene="LRRC49"
                     /coded_by="XM_061157951.1:704..2677"
                     /db_xref="GeneID:133066655"
ORIGIN      
        1 mktatsslsa fgdssiqtps ksrirqgchs agpnvsgdhi nlvsssmpsf pilqrsseek
       61 ilysdrltle rqkltvcpii dgeehlrlln fqhnsitqiq nisnlqrlif ldlydnqiee
      121 isglstlrsl rvlllgknri kkisnlenlk sldvldlhgn qitkienvnh lcdlrvlnla
      181 rnflshvdnl ngldslteln lrhnqitfvr dvdnlpclqr lflsfnnist fesvcclads
      241 tslsditfdg npiaqeswyk htilqnmmql rqldmkrite eerrmasvva kkeeekkres
      301 hkqsllkekk rltinnvark wdlqqhrits iainqdrrds dsqdhcqndg stvstfpeea
      361 gsldsgltsa lqglsvtdth lvevdgdtls lygsgalecl drnwsvqtag mvttvsftfi
      421 efdeivqvlp klkikfpnsl hlkfketnlv mlqqfnalaq lrrvdqltid pqgnpvvsft
      481 lwkyyvlfrl shfnmqking tevtqndmim aerlfgilah vasselpqyr lisilgdark
      541 kqfrylletk gkkpgivsee nndskrlvge ntnratlnyt trdfytekle eikekkkfck
      601 myiedlvkea teinmkneal qklwpqmfie lvrdavieir nknsymklcl qqitdqk
//
LOCUS       XP_061013935             657 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat-containing protein 49 isoform X3 [Dama dama].
ACCESSION   XP_061013935
VERSION     XP_061013935.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157952.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..657
                     /product="leucine-rich repeat-containing protein 49
                     isoform X3"
                     /calculated_mol_wt=75202
     Region          66..83
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          86..107
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          89..285
                     /region_name="PPP1R42"
                     /note="protein phosphatase 1 regulatory subunit 42;
                     cl42388"
                     /db_xref="CDD:455733"
     Region          108..129
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          130..151
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          152..173
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          174..195
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          196..217
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          218..242
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..657
                     /gene="LRRC49"
                     /coded_by="XM_061157952.1:570..2543"
                     /db_xref="GeneID:133066655"
ORIGIN      
        1 mktatsslsa fgdssiqtps ksrirqgchs agpnvsgdhi nlvsssmpsf pilqrsseek
       61 ilysdrltle rqkltvcpii dgeehlrlln fqhnsitqiq nisnlqrlif ldlydnqiee
      121 isglstlrsl rvlllgknri kkisnlenlk sldvldlhgn qitkienvnh lcdlrvlnla
      181 rnflshvdnl ngldslteln lrhnqitfvr dvdnlpclqr lflsfnnist fesvcclads
      241 tslsditfdg npiaqeswyk htilqnmmql rqldmkrite eerrmasvva kkeeekkres
      301 hkqsllkekk rltinnvark wdlqqhrits iainqdrrds dsqdhcqndg stvstfpeea
      361 gsldsgltsa lqglsvtdth lvevdgdtls lygsgalecl drnwsvqtag mvttvsftfi
      421 efdeivqvlp klkikfpnsl hlkfketnlv mlqqfnalaq lrrvdqltid pqgnpvvsft
      481 lwkyyvlfrl shfnmqking tevtqndmim aerlfgilah vasselpqyr lisilgdark
      541 kqfrylletk gkkpgivsee nndskrlvge ntnratlnyt trdfytekle eikekkkfck
      601 myiedlvkea teinmkneal qklwpqmfie lvrdavieir nknsymklcl qqitdqk
//
LOCUS       XP_061013936             657 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat-containing protein 49 isoform X3 [Dama dama].
ACCESSION   XP_061013936
VERSION     XP_061013936.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157953.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..657
                     /product="leucine-rich repeat-containing protein 49
                     isoform X3"
                     /calculated_mol_wt=75202
     Region          66..83
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          86..107
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          89..285
                     /region_name="PPP1R42"
                     /note="protein phosphatase 1 regulatory subunit 42;
                     cl42388"
                     /db_xref="CDD:455733"
     Region          108..129
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          130..151
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          152..173
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          174..195
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          196..217
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          218..242
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..657
                     /gene="LRRC49"
                     /coded_by="XM_061157953.1:608..2581"
                     /db_xref="GeneID:133066655"
ORIGIN      
        1 mktatsslsa fgdssiqtps ksrirqgchs agpnvsgdhi nlvsssmpsf pilqrsseek
       61 ilysdrltle rqkltvcpii dgeehlrlln fqhnsitqiq nisnlqrlif ldlydnqiee
      121 isglstlrsl rvlllgknri kkisnlenlk sldvldlhgn qitkienvnh lcdlrvlnla
      181 rnflshvdnl ngldslteln lrhnqitfvr dvdnlpclqr lflsfnnist fesvcclads
      241 tslsditfdg npiaqeswyk htilqnmmql rqldmkrite eerrmasvva kkeeekkres
      301 hkqsllkekk rltinnvark wdlqqhrits iainqdrrds dsqdhcqndg stvstfpeea
      361 gsldsgltsa lqglsvtdth lvevdgdtls lygsgalecl drnwsvqtag mvttvsftfi
      421 efdeivqvlp klkikfpnsl hlkfketnlv mlqqfnalaq lrrvdqltid pqgnpvvsft
      481 lwkyyvlfrl shfnmqking tevtqndmim aerlfgilah vasselpqyr lisilgdark
      541 kqfrylletk gkkpgivsee nndskrlvge ntnratlnyt trdfytekle eikekkkfck
      601 myiedlvkea teinmkneal qklwpqmfie lvrdavieir nknsymklcl qqitdqk
//
LOCUS       XP_061013937             611 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat-containing protein 49 isoform X4 [Dama dama].
ACCESSION   XP_061013937
VERSION     XP_061013937.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157954.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..611
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..611
                     /product="leucine-rich repeat-containing protein 49
                     isoform X4"
                     /calculated_mol_wt=70515
     Region          20..37
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          40..61
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          43..239
                     /region_name="PPP1R42"
                     /note="protein phosphatase 1 regulatory subunit 42;
                     cl42388"
                     /db_xref="CDD:455733"
     Region          62..83
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          84..105
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          106..127
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          128..149
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          150..171
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          172..196
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..611
                     /gene="LRRC49"
                     /coded_by="XM_061157954.1:602..2437"
                     /db_xref="GeneID:133066655"
ORIGIN      
        1 mpsfpilqrs seekilysdr ltlerqkltv cpiidgeehl rllnfqhnsi tqiqnisnlq
       61 rlifldlydn qieeisglst lrslrvlllg knrikkisnl enlksldvld lhgnqitkie
      121 nvnhlcdlrv lnlarnflsh vdnlngldsl telnlrhnqi tfvrdvdnlp clqrlflsfn
      181 nistfesvcc ladstslsdi tfdgnpiaqe swykhtilqn mmqlrqldmk riteeerrma
      241 svvakkeeek kreshkqsll kekkrltinn varkwdlqqh ritsiainqd rrdsdsqdhc
      301 qndgstvstf peeagsldsg ltsalqglsv tdthlvevdg dtlslygsga lecldrnwsv
      361 qtagmvttvs ftfiefdeiv qvlpklkikf pnslhlkfke tnlvmlqqfn alaqlrrvdq
      421 ltidpqgnpv vsftlwkyyv lfrlshfnmq kingtevtqn dmimaerlfg ilahvassel
      481 pqyrlisilg darkkqfryl letkgkkpgi vseenndskr lvgentnrat lnyttrdfyt
      541 ekleeikekk kfckmyiedl vkeateinmk nealqklwpq mfielvrdav ieirnknsym
      601 klclqqitdq k
//
LOCUS       XP_061013938             492 aa            linear   MAM 02-DEC-2023
DEFINITION  la-related protein 6 [Dama dama].
ACCESSION   XP_061013938
VERSION     XP_061013938.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157955.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..492
                     /product="la-related protein 6"
                     /calculated_mol_wt=54713
     Region          93..169
                     /region_name="LARP_6"
                     /note="La RNA-binding domain of La-related protein 6;
                     cd08033"
                     /db_xref="CDD:153402"
     Site            order(99,102..103,108,111..112,114,135..137)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:153402"
     Region          184..292
                     /region_name="RRM_LARP6"
                     /note="RNA recognition motif (RRM) found in La-related
                     protein 6 (LARP6) and similar proteins; cd12289"
                     /db_xref="CDD:409731"
     Region          452..482
                     /region_name="SUZ-C"
                     /note="SUZ-C motif; pfam12901"
                     /db_xref="CDD:463745"
     CDS             1..492
                     /gene="LARP6"
                     /coded_by="XM_061157955.1:59..1537"
                     /db_xref="GeneID:133066657"
ORIGIN      
        1 maqpgeetlp gpetavqirv aiqeaedvee pedeeegtea raagdparyl spgwgsasee
       61 epsrghsgat tsggenerdd leqewqppde elikklvdqi efyfsdenle kdafllkhvr
      121 rnklgyvsvk lltsfkkvkh ltrdwrttah alkysvtlel nedhrkvrrt tpvplfpnen
      181 lpskmllvyd lylspklwal atpqkngrvq ekvmehllkl fgtfgvissv rilkpgrelp
      241 pdirrisnry sqvgtqecai vefeeveaai kahefmites qgresmkail igmkppkkkp
      301 skeknqdeep tssihlnksl nrrveelqyv gdessansss dpesnptspm agrrhavank
      361 lspsshqnlf lspnaspcss pwssplaqrk gvsrksplae egrpntsasp eiirkctdss
      421 sdssvtpsgs pwvrrrrqae mgpqekspra spllsrkmkt adglpvgvlr lprgpdntrg
      481 fhgghersra ci
//
LOCUS       XP_061013939            1415 aa            linear   MAM 02-DEC-2023
DEFINITION  uveal autoantigen with coiled-coil domains and ankyrin repeats
            isoform X1 [Dama dama].
ACCESSION   XP_061013939
VERSION     XP_061013939.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157956.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1415
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1415
                     /product="uveal autoantigen with coiled-coil domains and
                     ankyrin repeats isoform X1"
                     /calculated_mol_wt=162104
     Region          33..270
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          39..66
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          68..99
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          102..132
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          135..165
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(136,140..141,144..146,148..149,153,156,165,167,169,
                     173..174,177..179,181..182,186,189,198,200,202,206..207,
                     210..212,214..215,219,222,231)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          167..198
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          200..231
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          252..>615
                     /region_name="PLN02939"
                     /note="transferase, transferring glycosyl groups"
                     /db_xref="CDD:215507"
     Region          479..1346
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1415
                     /gene="UACA"
                     /coded_by="XM_061157956.1:59..4306"
                     /db_xref="GeneID:133066658"
ORIGIN      
        1 mkslksrlrr qdapgpapsg aaaavsaqaa dwnkyddrlm kaaergdvek vssilakkgv
       61 npgkldvegr safhvvaskg nleclnaill hgvdittsdt agrnalhlaa kyghalclqk
      121 llqyncpteh vdlqgrtalh daamadcpss iqllcdhgas vnakdvdgrt plvlatqmcr
      181 pticqllidr gadinsrdkq nrtalmlgce ygckdavevl ikngadvtll dalghdssyy
      241 arigdnldil tllktasens nkgrelwkkg pslqqrnlsq mldevnmksn qrehqnvqdl
      301 eienedlker lrkiqqeqri lldkvnglql qlneevmvad dlesekeklk sllaakekqh
      361 eeslrtieal ksrfkyfesd hlgsgshfrk edmllkqgqm ymtesqctst gmpvhmqsrs
      421 mlrplelalp nqasysenei lkkeleamrt fcdsakqdrl klqnelahkv aecralalec
      481 ervkedsdeq vkqledalkd vqkrmyeseg kvkqmqthfl alkehltsda atgnhrlmee
      541 lkdqlkdmkv kyegasaevg klrnqikqne mlveefkrde gklmeenkrl qkelsmcele
      601 rekrgrklte megqlkdlsv klalsvpaek fenmksllsn evnekakkli dvereyersl
      661 neirplkrel enlksklaqh vkpeeheqlk srleqksgel gkriteltsk nqtlqkeiek
      721 vcldnklltq qvhnlttemk nhyvplkvse emkkshdviv ddlnkklsdv thkytekkle
      781 mekllmenas lsknvsrlet vfipperhek emvalkssit elkkqlseln kkcgedqeki
      841 yslmsenndl kktmshqyvp vktheeikta lsstldktnr elvdvkkkce dinqefvkik
      901 deneilkrnl entqnqvkae yislreheek msgirksmkk vqehsaeila nykkgqeeiv
      961 tlhaeiaaqk reldtiqeci klkyapiisl eecerkfkat ekelkeqlsq qtqkyhtsee
     1021 eakkcrqend klkkeiltlq kdlkdksvli enaheteral srkteelnrq lkdllqkyte
     1081 akkekeklve enakqtseil aaqtllqkqh vpleqveslk kslsgtietl keelktkqrc
     1141 yekeqqtvtq lrqmlenqkn ssvplaehlq vkeafekevg iikaslreke eesqnkteev
     1201 sklqseiqnt kqalkkletr evvdlskyka tksdletqis nlneklanln rnyeevceev
     1261 lhakkkelsa kdekellhfs ieqeikdqqe rcdkslttit elqrriqesa kqieakdnki
     1321 tellsdverl kqalsglsql tygsgspskr qsqlidglqq qvrslqqqla dadrqhqevi
     1381 aiyrthllsa aqghmdedvq aallqiiqmr qglvc
//
LOCUS       XP_061013941            1401 aa            linear   MAM 02-DEC-2023
DEFINITION  uveal autoantigen with coiled-coil domains and ankyrin repeats
            isoform X2 [Dama dama].
ACCESSION   XP_061013941
VERSION     XP_061013941.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157958.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1401
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1401
                     /product="uveal autoantigen with coiled-coil domains and
                     ankyrin repeats isoform X2"
                     /calculated_mol_wt=160970
     Region          15..256
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          25..52
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          54..85
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          88..118
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          121..151
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(122,126..127,130..132,134..135,139,142,151,153,155,
                     159..160,163..165,167..168,172,175,184,186,188,192..193,
                     196..198,200..201,205,208,217)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          153..184
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          186..217
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          238..>601
                     /region_name="PLN02939"
                     /note="transferase, transferring glycosyl groups"
                     /db_xref="CDD:215507"
     Region          465..1332
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1401
                     /gene="UACA"
                     /coded_by="XM_061157958.1:339..4544"
                     /db_xref="GeneID:133066658"
ORIGIN      
        1 mmscwfscap knrqaadwnk yddrlmkaae rgdvekvssi lakkgvnpgk ldvegrsafh
       61 vvaskgnlec lnaillhgvd ittsdtagrn alhlaakygh alclqkllqy ncptehvdlq
      121 grtalhdaam adcpssiqll cdhgasvnak dvdgrtplvl atqmcrptic qllidrgadi
      181 nsrdkqnrta lmlgceygck davevlikng advtlldalg hdssyyarig dnldiltllk
      241 tasensnkgr elwkkgpslq qrnlsqmlde vnmksnqreh qnvqdleien edlkerlrki
      301 qqeqrilldk vnglqlqlne evmvaddles ekeklkslla akekqheesl rtiealksrf
      361 kyfesdhlgs gshfrkedml lkqgqmymte sqctstgmpv hmqsrsmlrp lelalpnqas
      421 yseneilkke leamrtfcds akqdrlklqn elahkvaecr alalecervk edsdeqvkql
      481 edalkdvqkr myesegkvkq mqthflalke hltsdaatgn hrlmeelkdq lkdmkvkyeg
      541 asaevgklrn qikqnemlve efkrdegklm eenkrlqkel smcelerekr grkltemegq
      601 lkdlsvklal svpaekfenm ksllsnevne kakklidver eyerslneir plkrelenlk
      661 sklaqhvkpe eheqlksrle qksgelgkri teltsknqtl qkeiekvcld nklltqqvhn
      721 lttemknhyv plkvseemkk shdvivddln kklsdvthky tekklemekl lmenaslskn
      781 vsrletvfip perhekemva lkssitelkk qlselnkkcg edqekiyslm senndlkktm
      841 shqyvpvkth eeiktalsst ldktnrelvd vkkkcedinq efvkikdene ilkrnlentq
      901 nqvkaeyisl reheekmsgi rksmkkvqeh saeilanykk gqeeivtlha eiaaqkreld
      961 tiqeciklky apiisleece rkfkatekel keqlsqqtqk yhtseeeakk crqendklkk
     1021 eiltlqkdlk dksvlienah eteralsrkt eelnrqlkdl lqkyteakke keklveenak
     1081 qtseilaaqt llqkqhvple qveslkksls gtietlkeel ktkqrcyeke qqtvtqlrqm
     1141 lenqknssvp laehlqvkea fekevgiika slrekeeesq nkteevsklq seiqntkqal
     1201 kkletrevvd lskykatksd letqisnlne klanlnrnye evceevlhak kkelsakdek
     1261 ellhfsieqe ikdqqercdk slttitelqr riqesakqie akdnkitell sdverlkqal
     1321 sglsqltygs gspskrqsql idglqqqvrs lqqqladadr qhqeviaiyr thllsaaqgh
     1381 mdedvqaall qiiqmrqglv c
//
LOCUS       XP_061013942            1398 aa            linear   MAM 02-DEC-2023
DEFINITION  uveal autoantigen with coiled-coil domains and ankyrin repeats
            isoform X3 [Dama dama].
ACCESSION   XP_061013942
VERSION     XP_061013942.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157959.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1398
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1398
                     /product="uveal autoantigen with coiled-coil domains and
                     ankyrin repeats isoform X3"
                     /calculated_mol_wt=160278
     Region          33..270
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          39..66
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          68..99
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          102..132
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          135..165
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(136,140..141,144..146,148..149,153,156,165,167,169,
                     173..174,177..179,181..182,186,189,198,200,202,206..207,
                     210..212,214..215,219,222,231)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          167..198
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          200..231
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          252..>615
                     /region_name="PLN02939"
                     /note="transferase, transferring glycosyl groups"
                     /db_xref="CDD:215507"
     Region          479..1346
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1398
                     /gene="UACA"
                     /coded_by="XM_061157959.1:59..4255"
                     /db_xref="GeneID:133066658"
ORIGIN      
        1 mkslksrlrr qdapgpapsg aaaavsaqaa dwnkyddrlm kaaergdvek vssilakkgv
       61 npgkldvegr safhvvaskg nleclnaill hgvdittsdt agrnalhlaa kyghalclqk
      121 llqyncpteh vdlqgrtalh daamadcpss iqllcdhgas vnakdvdgrt plvlatqmcr
      181 pticqllidr gadinsrdkq nrtalmlgce ygckdavevl ikngadvtll dalghdssyy
      241 arigdnldil tllktasens nkgrelwkkg pslqqrnlsq mldevnmksn qrehqnvqdl
      301 eienedlker lrkiqqeqri lldkvnglql qlneevmvad dlesekeklk sllaakekqh
      361 eeslrtieal ksrfkyfesd hlgsgshfrk edmllkqgqm ymtesqctst gmpvhmqsrs
      421 mlrplelalp nqasysenei lkkeleamrt fcdsakqdrl klqnelahkv aecralalec
      481 ervkedsdeq vkqledalkd vqkrmyeseg kvkqmqthfl alkehltsda atgnhrlmee
      541 lkdqlkdmkv kyegasaevg klrnqikqne mlveefkrde gklmeenkrl qkelsmcele
      601 rekrgrklte megqlkdlsv klalsvpaek fenmksllsn evnekakkli dvereyersl
      661 neirplkrel enlksklaqh vkpeeheqlk srleqksgel gkriteltsk nqtlqkeiek
      721 vcldnklltq qvhnlttemk nhyvplkvse emkkshdviv ddlnkklsdv thkytekkle
      781 mekllmenas lsknvsrlet vfipperhek emvalkssit elkkqlseln kkcgedqeki
      841 yslmsenndl kktmshqyvp vktheeikta lsstldktnr elvdvkkkce dinqefvkik
      901 deneilkrnl entqnqvkae yislreheek msgirksmkk vqehsaeila nykkgqeeiv
      961 tlhaeiaaqk reldtiqeci klkyapiisl eecerkfkat ekelkeqlsq qtqkyhtsee
     1021 eakkcrqend klkkeiltlq kdlkdksvli enaheteral srkteelnrq lkdllqkyte
     1081 akkekeklve enakqtseil aaqtllqkqh vpleqveslk kslsgtietl keelktkqrc
     1141 yekeqqtvtq lrqmlenqkn ssvplaehlq vkeafekevg iikaslreke eesqnkteev
     1201 sklqseiqnt kqalkkletr evvdlskyka tksdletqis nlneklanln rnyeevceev
     1261 lhakkkelsa kdekellhfs ieqeikdqqe rcdkslttit elqrriqesa kqieakdnki
     1321 tellsdverl kqalsglsql tygsgspskr qsqlidglqq qvrslqqqla dadrqhqevi
     1381 aiyrthllsa aqfhqeal
//
LOCUS       XP_061013943             462 aa            linear   MAM 02-DEC-2023
DEFINITION  elongation factor 1-alpha 1-like [Dama dama].
ACCESSION   XP_061013943
VERSION     XP_061013943.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157960.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..462
                     /product="elongation factor 1-alpha 1-like"
                     /calculated_mol_wt=50011
     Region          1..460
                     /region_name="PTZ00141"
                     /note="elongation factor 1- alpha; Provisional"
                     /db_xref="CDD:185474"
     Site            14..21
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206670"
     Site            order(15,17,21..22,25,28..29,76..77,95..96,119..120,169,
                     173)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206670"
     Site            order(17,19..22,153..154,156,194..196)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206670"
     Site            order(21,64,67..68,70,72,74..76,78,89,91,93..95,97,100)
                     /site_type="other"
                     /note="EF1Balpha binding site [polypeptide binding]"
                     /db_xref="CDD:206670"
     Site            66..76
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206670"
     Site            72
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206670"
     Site            91..94
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206670"
     Site            93..111
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206670"
     Site            153..156
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206670"
     Site            194..196
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206670"
     CDS             1..462
                     /gene="LOC133066660"
                     /coded_by="XM_061157960.1:67..1455"
                     /db_xref="GeneID:133066660"
ORIGIN      
        1 mgkekthini vvighvdsgk stttghliyk cggidkrtie kfekeaaemg kgsfkyawvl
       61 dklkaererg itidislwkf etskyyvtii dapghrdfik nmitgtsqad cavlivaagv
      121 gefeagiskn gqtrehalla ytlgvkqliv gvnkmdstep pysqkryeei vkevstyikk
      181 igynpdtvaf vpisgwngdn mlepsanmpw fkgwkvtrkd gnasgttlle aldcilpptr
      241 ptdkplrlpl qdvykiggig tvpvgrvetg vlkpgmvvtf apvnvttevk svemhheals
      301 ealpgdnvgf nvknvsvkdv rrgnvagdsk ndppmeaagf taqviilnhp gqisagyapv
      361 ldchtahiac kfaelkekid rrsgekledg pkflksgdaa ivdmvpgkpm cvesfsdypp
      421 lgrfavrdmr qtvavgvika vdkkaagagk vtksaqkaqk ak
//
LOCUS       XP_061013944             782 aa            linear   MAM 02-DEC-2023
DEFINITION  transducin-like enhancer protein 3 isoform X1 [Dama dama].
ACCESSION   XP_061013944
VERSION     XP_061013944.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157961.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..782
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..782
                     /product="transducin-like enhancer protein 3 isoform X1"
                     /calculated_mol_wt=84333
     Region          18..143
                     /region_name="TLE_N"
                     /note="Groucho/TLE N-terminal Q-rich domain; pfam03920"
                     /db_xref="CDD:461094"
     Region          <261..482
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          <495..780
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          499..538
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          546..584
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          589..625
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          632..667
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          672..705
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          713..747
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          754..778
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..782
                     /gene="TLE3"
                     /coded_by="XM_061157961.1:1028..3376"
                     /db_xref="GeneID:133066661"
ORIGIN      
        1 mypqgrhpap hqpgqpgfkf tvaescdrik defqflqaqy hslkveydkl anektemqrh
       61 yvmyyemsyg lniemhkqte iakrlntila qimpflsqeh qqqvaqaver akqvtmteln
      121 aiigvrglpn lpltqqqlqa qhlshathgp pvqlpphpsg lqppgippvt gsssgllalg
      181 algsqahlsv kdeknhheld hreressann svspseslra sekhrgsady smeakkrkae
      241 ekdslsryds dgdksddlvv dvsnedpatp rvspahsppe ngldkarglk kdaptspasv
      301 asssstpssk tkdlghndks stpglksntp tprndaptpg tsttpglrsm pgkppgmdpi
      361 gimasalrtp isitssyaap fammshhemn gsltspsaya glhnippqms aaaaaaaaay
      421 grspmvsfga vgfdphppmr atglpsslas ipggkpaysf hvsadgqmqp vpfphdalag
      481 pgiprharqi ntlshgevvc avtisnptrh vytggkgcvk iwdisqpgsk spisqldcln
      541 rdnyirsckl lpdgrtlivg geastltiwd lasptprika eltssapacy alaispdakv
      601 cfsccsdgni avwdlhnqtl vrqfqghtdg ascidishdg tklwtggldn tvrswdlreg
      661 rqlqqhdfts qifslgycpt gewlavgmes snvevlhhtk pdkyqlhlhe scvlslkfay
      721 cgkwfvstgk dnllnawrtp ygasifqske sssvlscdis addkyivtgs gdkkatvyev
      781 iy
//
LOCUS       XP_061013945             779 aa            linear   MAM 02-DEC-2023
DEFINITION  transducin-like enhancer protein 3 isoform X2 [Dama dama].
ACCESSION   XP_061013945
VERSION     XP_061013945.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157962.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..779
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..779
                     /product="transducin-like enhancer protein 3 isoform X2"
                     /calculated_mol_wt=84032
     Region          18..143
                     /region_name="TLE_N"
                     /note="Groucho/TLE N-terminal Q-rich domain; pfam03920"
                     /db_xref="CDD:461094"
     Region          <261..479
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          <492..777
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          496..535
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          543..581
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          586..622
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          629..664
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          669..702
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          710..744
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          751..775
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..779
                     /gene="TLE3"
                     /coded_by="XM_061157962.1:1026..3365"
                     /db_xref="GeneID:133066661"
ORIGIN      
        1 mypqgrhpap hqpgqpgfkf tvaescdrik defqflqaqy hslkveydkl anektemqrh
       61 yvmyyemsyg lniemhkqte iakrlntila qimpflsqeh qqqvaqaver akqvtmteln
      121 aiigvrglpn lpltqqqlqa qhlshathgp pvqlpphpsg lqppgippvt gsssgllalg
      181 algsqahlsv kdeknhheld hreressann svspseslra sekhrgsady smeakkrkae
      241 ekdslsryds dgdksddlvv dvsnedpatp rvspahsppe ngldkarglk kdaptspasv
      301 asssstpssk tkdlghndks stpglksntp tprndaptpg tsttpglrsm pgkppgmdpi
      361 asalrtpisi tssyaapfam mshhemngsl tspsayaglh nippqmsaaa aaaaaaygrs
      421 pmvsfgavgf dphppmratg lpsslasipg gkpaysfhvs adgqmqpvpf phdalagpgi
      481 prharqintl shgevvcavt isnptrhvyt ggkgcvkiwd isqpgskspi sqldclnrdn
      541 yirsckllpd grtlivggea stltiwdlas ptprikaelt ssapacyala ispdakvcfs
      601 ccsdgniavw dlhnqtlvrq fqghtdgasc idishdgtkl wtggldntvr swdlregrql
      661 qqhdftsqif slgycptgew lavgmessnv evlhhtkpdk yqlhlhescv lslkfaycgk
      721 wfvstgkdnl lnawrtpyga sifqskesss vlscdisadd kyivtgsgdk katvyeviy
//
LOCUS       XP_061013946             777 aa            linear   MAM 02-DEC-2023
DEFINITION  transducin-like enhancer protein 3 isoform X3 [Dama dama].
ACCESSION   XP_061013946
VERSION     XP_061013946.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157963.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..777
                     /product="transducin-like enhancer protein 3 isoform X3"
                     /calculated_mol_wt=83872
     Region          18..143
                     /region_name="TLE_N"
                     /note="Groucho/TLE N-terminal Q-rich domain; pfam03920"
                     /db_xref="CDD:461094"
     Region          <261..477
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          <490..775
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          494..533
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          541..579
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          584..620
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          627..662
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          667..700
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          708..742
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          749..773
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..777
                     /gene="TLE3"
                     /coded_by="XM_061157963.1:1028..3361"
                     /db_xref="GeneID:133066661"
ORIGIN      
        1 mypqgrhpap hqpgqpgfkf tvaescdrik defqflqaqy hslkveydkl anektemqrh
       61 yvmyyemsyg lniemhkqte iakrlntila qimpflsqeh qqqvaqaver akqvtmteln
      121 aiigvrglpn lpltqqqlqa qhlshathgp pvqlpphpsg lqppgippvt gsssgllalg
      181 algsqahlsv kdeknhheld hreressann svspseslra sekhrgsady smeakkrkae
      241 ekdslsryds dgdksddlvv dvsnedpatp rvspahsppe ngldkarglk kdaptspasv
      301 asssstpssk tkdlghndks stpglksntp tprndaptpg tsttpglrsm pgkppgmdpi
      361 gimasalrtp isitssyaap fammshhemn gsltspsaya glhnippqms aaaaaaaaay
      421 grspmvgfdp hppmratglp sslasipggk paysfhvsad gqmqpvpfph dalagpgipr
      481 harqintlsh gevvcavtis nptrhvytgg kgcvkiwdis qpgskspisq ldclnrdnyi
      541 rsckllpdgr tlivggeast ltiwdlaspt prikaeltss apacyalais pdakvcfscc
      601 sdgniavwdl hnqtlvrqfq ghtdgascid ishdgtklwt ggldntvrsw dlregrqlqq
      661 hdftsqifsl gycptgewla vgmessnvev lhhtkpdkyq lhlhescvls lkfaycgkwf
      721 vstgkdnlln awrtpygasi fqskesssvl scdisaddky ivtgsgdkka tvyeviy
//
LOCUS       XP_061013947             774 aa            linear   MAM 02-DEC-2023
DEFINITION  transducin-like enhancer protein 3 isoform X4 [Dama dama].
ACCESSION   XP_061013947
VERSION     XP_061013947.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157964.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..774
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..774
                     /product="transducin-like enhancer protein 3 isoform X4"
                     /calculated_mol_wt=83570
     Region          18..143
                     /region_name="TLE_N"
                     /note="Groucho/TLE N-terminal Q-rich domain; pfam03920"
                     /db_xref="CDD:461094"
     Region          <261..474
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          <487..772
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          491..530
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          538..576
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          581..617
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          624..659
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          664..697
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          705..739
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          746..770
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..774
                     /gene="TLE3"
                     /coded_by="XM_061157964.1:1026..3350"
                     /db_xref="GeneID:133066661"
ORIGIN      
        1 mypqgrhpap hqpgqpgfkf tvaescdrik defqflqaqy hslkveydkl anektemqrh
       61 yvmyyemsyg lniemhkqte iakrlntila qimpflsqeh qqqvaqaver akqvtmteln
      121 aiigvrglpn lpltqqqlqa qhlshathgp pvqlpphpsg lqppgippvt gsssgllalg
      181 algsqahlsv kdeknhheld hreressann svspseslra sekhrgsady smeakkrkae
      241 ekdslsryds dgdksddlvv dvsnedpatp rvspahsppe ngldkarglk kdaptspasv
      301 asssstpssk tkdlghndks stpglksntp tprndaptpg tsttpglrsm pgkppgmdpi
      361 asalrtpisi tssyaapfam mshhemngsl tspsayaglh nippqmsaaa aaaaaaygrs
      421 pmvgfdphpp mratglpssl asipggkpay sfhvsadgqm qpvpfphdal agpgiprhar
      481 qintlshgev vcavtisnpt rhvytggkgc vkiwdisqpg skspisqldc lnrdnyirsc
      541 kllpdgrtli vggeastlti wdlasptpri kaeltssapa cyalaispda kvcfsccsdg
      601 niavwdlhnq tlvrqfqght dgascidish dgtklwtggl dntvrswdlr egrqlqqhdf
      661 tsqifslgyc ptgewlavgm essnvevlhh tkpdkyqlhl hescvlslkf aycgkwfvst
      721 gkdnllnawr tpygasifqs kesssvlscd isaddkyivt gsgdkkatvy eviy
//
LOCUS       XP_061013948             772 aa            linear   MAM 02-DEC-2023
DEFINITION  transducin-like enhancer protein 3 isoform X5 [Dama dama].
ACCESSION   XP_061013948
VERSION     XP_061013948.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157965.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..772
                     /product="transducin-like enhancer protein 3 isoform X5"
                     /calculated_mol_wt=83272
     Region          18..133
                     /region_name="TLE_N"
                     /note="Groucho/TLE N-terminal Q-rich domain; pfam03920"
                     /db_xref="CDD:461094"
     Region          <251..472
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          <485..770
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          489..528
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          536..574
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          579..615
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          622..657
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          662..695
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          703..737
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          744..768
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..772
                     /gene="TLE3"
                     /coded_by="XM_061157965.1:1027..3345"
                     /db_xref="GeneID:133066661"
ORIGIN      
        1 mypqgrhpap hqpgqpgfkf tvaescdrik defqflqaqy hslkveydkl anektemqrh
       61 yvmyyemsyg lniemhkqte iakrlntila qimpflsqeh qqqvaqaver akqvtmteln
      121 aiigqqqlqa qhlshathgp pvqlpphpsg lqppgippvt gsssgllalg algsqahlsv
      181 kdeknhheld hreressann svspseslra sekhrgsady smeakkrkae ekdslsryds
      241 dgdksddlvv dvsnedpatp rvspahsppe ngldkarglk kdaptspasv asssstpssk
      301 tkdlghndks stpglksntp tprndaptpg tsttpglrsm pgkppgmdpi gimasalrtp
      361 isitssyaap fammshhemn gsltspsaya glhnippqms aaaaaaaaay grspmvsfga
      421 vgfdphppmr atglpsslas ipggkpaysf hvsadgqmqp vpfphdalag pgiprharqi
      481 ntlshgevvc avtisnptrh vytggkgcvk iwdisqpgsk spisqldcln rdnyirsckl
      541 lpdgrtlivg geastltiwd lasptprika eltssapacy alaispdakv cfsccsdgni
      601 avwdlhnqtl vrqfqghtdg ascidishdg tklwtggldn tvrswdlreg rqlqqhdfts
      661 qifslgycpt gewlavgmes snvevlhhtk pdkyqlhlhe scvlslkfay cgkwfvstgk
      721 dnllnawrtp ygasifqske sssvlscdis addkyivtgs gdkkatvyev iy
//
LOCUS       XP_061013949             769 aa            linear   MAM 02-DEC-2023
DEFINITION  transducin-like enhancer protein 3 isoform X6 [Dama dama].
ACCESSION   XP_061013949
VERSION     XP_061013949.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157966.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..769
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..769
                     /product="transducin-like enhancer protein 3 isoform X6"
                     /calculated_mol_wt=82970
     Region          18..133
                     /region_name="TLE_N"
                     /note="Groucho/TLE N-terminal Q-rich domain; pfam03920"
                     /db_xref="CDD:461094"
     Region          <251..469
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          <482..767
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          486..525
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          533..571
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          576..612
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          619..654
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          659..692
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          700..734
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          741..765
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..769
                     /gene="TLE3"
                     /coded_by="XM_061157966.1:1025..3334"
                     /db_xref="GeneID:133066661"
ORIGIN      
        1 mypqgrhpap hqpgqpgfkf tvaescdrik defqflqaqy hslkveydkl anektemqrh
       61 yvmyyemsyg lniemhkqte iakrlntila qimpflsqeh qqqvaqaver akqvtmteln
      121 aiigqqqlqa qhlshathgp pvqlpphpsg lqppgippvt gsssgllalg algsqahlsv
      181 kdeknhheld hreressann svspseslra sekhrgsady smeakkrkae ekdslsryds
      241 dgdksddlvv dvsnedpatp rvspahsppe ngldkarglk kdaptspasv asssstpssk
      301 tkdlghndks stpglksntp tprndaptpg tsttpglrsm pgkppgmdpi asalrtpisi
      361 tssyaapfam mshhemngsl tspsayaglh nippqmsaaa aaaaaaygrs pmvsfgavgf
      421 dphppmratg lpsslasipg gkpaysfhvs adgqmqpvpf phdalagpgi prharqintl
      481 shgevvcavt isnptrhvyt ggkgcvkiwd isqpgskspi sqldclnrdn yirsckllpd
      541 grtlivggea stltiwdlas ptprikaelt ssapacyala ispdakvcfs ccsdgniavw
      601 dlhnqtlvrq fqghtdgasc idishdgtkl wtggldntvr swdlregrql qqhdftsqif
      661 slgycptgew lavgmessnv evlhhtkpdk yqlhlhescv lslkfaycgk wfvstgkdnl
      721 lnawrtpyga sifqskesss vlscdisadd kyivtgsgdk katvyeviy
//
LOCUS       XP_061013950             767 aa            linear   MAM 02-DEC-2023
DEFINITION  transducin-like enhancer protein 3 isoform X7 [Dama dama].
ACCESSION   XP_061013950
VERSION     XP_061013950.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157967.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..767
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..767
                     /product="transducin-like enhancer protein 3 isoform X7"
                     /calculated_mol_wt=82810
     Region          18..133
                     /region_name="TLE_N"
                     /note="Groucho/TLE N-terminal Q-rich domain; pfam03920"
                     /db_xref="CDD:461094"
     Region          <251..467
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          <480..765
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          484..523
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          531..569
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          574..610
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          617..652
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          657..690
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          698..732
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          739..763
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..767
                     /gene="TLE3"
                     /coded_by="XM_061157967.1:1027..3330"
                     /db_xref="GeneID:133066661"
ORIGIN      
        1 mypqgrhpap hqpgqpgfkf tvaescdrik defqflqaqy hslkveydkl anektemqrh
       61 yvmyyemsyg lniemhkqte iakrlntila qimpflsqeh qqqvaqaver akqvtmteln
      121 aiigqqqlqa qhlshathgp pvqlpphpsg lqppgippvt gsssgllalg algsqahlsv
      181 kdeknhheld hreressann svspseslra sekhrgsady smeakkrkae ekdslsryds
      241 dgdksddlvv dvsnedpatp rvspahsppe ngldkarglk kdaptspasv asssstpssk
      301 tkdlghndks stpglksntp tprndaptpg tsttpglrsm pgkppgmdpi gimasalrtp
      361 isitssyaap fammshhemn gsltspsaya glhnippqms aaaaaaaaay grspmvgfdp
      421 hppmratglp sslasipggk paysfhvsad gqmqpvpfph dalagpgipr harqintlsh
      481 gevvcavtis nptrhvytgg kgcvkiwdis qpgskspisq ldclnrdnyi rsckllpdgr
      541 tlivggeast ltiwdlaspt prikaeltss apacyalais pdakvcfscc sdgniavwdl
      601 hnqtlvrqfq ghtdgascid ishdgtklwt ggldntvrsw dlregrqlqq hdftsqifsl
      661 gycptgewla vgmessnvev lhhtkpdkyq lhlhescvls lkfaycgkwf vstgkdnlln
      721 awrtpygasi fqskesssvl scdisaddky ivtgsgdkka tvyeviy
//
LOCUS       XP_061013951             764 aa            linear   MAM 02-DEC-2023
DEFINITION  transducin-like enhancer protein 3 isoform X8 [Dama dama].
ACCESSION   XP_061013951
VERSION     XP_061013951.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157968.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..764
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..764
                     /product="transducin-like enhancer protein 3 isoform X8"
                     /calculated_mol_wt=82509
     Region          18..133
                     /region_name="TLE_N"
                     /note="Groucho/TLE N-terminal Q-rich domain; pfam03920"
                     /db_xref="CDD:461094"
     Region          <251..464
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          <477..762
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          481..520
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          528..566
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          571..607
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          614..649
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          654..687
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          695..729
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          736..760
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..764
                     /gene="TLE3"
                     /coded_by="XM_061157968.1:1025..3319"
                     /db_xref="GeneID:133066661"
ORIGIN      
        1 mypqgrhpap hqpgqpgfkf tvaescdrik defqflqaqy hslkveydkl anektemqrh
       61 yvmyyemsyg lniemhkqte iakrlntila qimpflsqeh qqqvaqaver akqvtmteln
      121 aiigqqqlqa qhlshathgp pvqlpphpsg lqppgippvt gsssgllalg algsqahlsv
      181 kdeknhheld hreressann svspseslra sekhrgsady smeakkrkae ekdslsryds
      241 dgdksddlvv dvsnedpatp rvspahsppe ngldkarglk kdaptspasv asssstpssk
      301 tkdlghndks stpglksntp tprndaptpg tsttpglrsm pgkppgmdpi asalrtpisi
      361 tssyaapfam mshhemngsl tspsayaglh nippqmsaaa aaaaaaygrs pmvgfdphpp
      421 mratglpssl asipggkpay sfhvsadgqm qpvpfphdal agpgiprhar qintlshgev
      481 vcavtisnpt rhvytggkgc vkiwdisqpg skspisqldc lnrdnyirsc kllpdgrtli
      541 vggeastlti wdlasptpri kaeltssapa cyalaispda kvcfsccsdg niavwdlhnq
      601 tlvrqfqght dgascidish dgtklwtggl dntvrswdlr egrqlqqhdf tsqifslgyc
      661 ptgewlavgm essnvevlhh tkpdkyqlhl hescvlslkf aycgkwfvst gkdnllnawr
      721 tpygasifqs kesssvlscd isaddkyivt gsgdkkatvy eviy
//
LOCUS       XP_061013952             722 aa            linear   MAM 02-DEC-2023
DEFINITION  transducin-like enhancer protein 3 isoform X9 [Dama dama].
ACCESSION   XP_061013952
VERSION     XP_061013952.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157969.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..722
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..722
                     /product="transducin-like enhancer protein 3 isoform X9"
                     /calculated_mol_wt=76874
     Region          <19..83
                     /region_name="TLE_N"
                     /note="Groucho/TLE N-terminal Q-rich domain; pfam03920"
                     /db_xref="CDD:461094"
     Region          <435..720
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          439..478
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          486..524
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          529..565
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          572..607
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          612..645
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          653..687
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          694..718
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..722
                     /gene="TLE3"
                     /coded_by="XM_061157969.1:333..2501"
                     /db_xref="GeneID:133066661"
ORIGIN      
        1 mklpklcpgv rvslggekte iakrlntila qimpflsqeh qqqvaqaver akqvtmteln
       61 aiigvrglpn lpltqqqlqa qhlshathgp pvqlpphpsg lqppgippvt gsssgllalg
      121 algsqahlsv kdeknhheld hreressann svspseslra sekhrgsady smeakkrkae
      181 ekdslsryds dgdksddlvv dvsnedpatp rvspahsppe ngldkarglk kdaptspasv
      241 asssstpssk tkdlghndks stpglksntp tprndaptpg tsttpglrsm pgkppgmdpi
      301 gimasalrtp isitssyaap fammshhemn gsltspsaya glhnippqms aaaaaaaaay
      361 grspmvsfga vgfdphppmr atglpsslas ipggkpaysf hvsadgqmqp vpfphdalag
      421 pgiprharqi ntlshgevvc avtisnptrh vytggkgcvk iwdisqpgsk spisqldcln
      481 rdnyirsckl lpdgrtlivg geastltiwd lasptprika eltssapacy alaispdakv
      541 cfsccsdgni avwdlhnqtl vrqfqghtdg ascidishdg tklwtggldn tvrswdlreg
      601 rqlqqhdfts qifslgycpt gewlavgmes snvevlhhtk pdkyqlhlhe scvlslkfay
      661 cgkwfvstgk dnllnawrtp ygasifqske sssvlscdis addkyivtgs gdkkatvyev
      721 iy
//
LOCUS       XP_061013953             698 aa            linear   MAM 02-DEC-2023
DEFINITION  transducin-like enhancer protein 3 isoform X10 [Dama dama].
ACCESSION   XP_061013953
VERSION     XP_061013953.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157970.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..698
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..698
                     /product="transducin-like enhancer protein 3 isoform X10"
                     /calculated_mol_wt=75492
     Region          18..124
                     /region_name="TLE_N"
                     /note="Groucho/TLE N-terminal Q-rich domain; pfam03920"
                     /db_xref="CDD:461094"
     Region          <177..398
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          <411..696
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          415..454
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          462..500
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          505..541
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          548..583
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          588..621
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          629..663
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          670..694
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..698
                     /gene="TLE3"
                     /coded_by="XM_061157970.1:1028..3124"
                     /db_xref="GeneID:133066661"
ORIGIN      
        1 mypqgrhpap hqpgqpgfkf tvaescdrik defqflqaqy hslkveydkl anektemqrh
       61 yvmyyemsyg lniemhkqte iakrlntila qimpflsqeh qqqvaqaver akqvtmteln
      121 aiignnsvsp seslrasekh rgsadysmea kkrkaeekds lsrydsdgdk sddlvvdvsn
      181 edpatprvsp ahsppengld karglkkdap tspasvasss stpssktkdl ghndksstpg
      241 lksntptprn daptpgtstt pglrsmpgkp pgmdpigima salrtpisit ssyaapfamm
      301 shhemngslt spsayaglhn ippqmsaaaa aaaaaygrsp mvsfgavgfd phppmratgl
      361 psslasipgg kpaysfhvsa dgqmqpvpfp hdalagpgip rharqintls hgevvcavti
      421 snptrhvytg gkgcvkiwdi sqpgskspis qldclnrdny irsckllpdg rtlivggeas
      481 tltiwdlasp tprikaelts sapacyalai spdakvcfsc csdgniavwd lhnqtlvrqf
      541 qghtdgasci dishdgtklw tggldntvrs wdlregrqlq qhdftsqifs lgycptgewl
      601 avgmessnve vlhhtkpdky qlhlhescvl slkfaycgkw fvstgkdnll nawrtpygas
      661 ifqskesssv lscdisaddk yivtgsgdkk atvyeviy
//
LOCUS       XP_061013955             693 aa            linear   MAM 02-DEC-2023
DEFINITION  transducin-like enhancer protein 3 isoform X11 [Dama dama].
ACCESSION   XP_061013955
VERSION     XP_061013955.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157972.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..693
                     /product="transducin-like enhancer protein 3 isoform X11"
                     /calculated_mol_wt=75031
     Region          18..124
                     /region_name="TLE_N"
                     /note="Groucho/TLE N-terminal Q-rich domain; pfam03920"
                     /db_xref="CDD:461094"
     Region          <177..393
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          <406..691
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          410..449
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          457..495
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          500..536
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          543..578
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          583..616
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          624..658
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          665..689
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..693
                     /gene="TLE3"
                     /coded_by="XM_061157972.1:1028..3109"
                     /db_xref="GeneID:133066661"
ORIGIN      
        1 mypqgrhpap hqpgqpgfkf tvaescdrik defqflqaqy hslkveydkl anektemqrh
       61 yvmyyemsyg lniemhkqte iakrlntila qimpflsqeh qqqvaqaver akqvtmteln
      121 aiignnsvsp seslrasekh rgsadysmea kkrkaeekds lsrydsdgdk sddlvvdvsn
      181 edpatprvsp ahsppengld karglkkdap tspasvasss stpssktkdl ghndksstpg
      241 lksntptprn daptpgtstt pglrsmpgkp pgmdpigima salrtpisit ssyaapfamm
      301 shhemngslt spsayaglhn ippqmsaaaa aaaaaygrsp mvgfdphppm ratglpssla
      361 sipggkpays fhvsadgqmq pvpfphdala gpgiprharq intlshgevv cavtisnptr
      421 hvytggkgcv kiwdisqpgs kspisqldcl nrdnyirsck llpdgrtliv ggeastltiw
      481 dlasptprik aeltssapac yalaispdak vcfsccsdgn iavwdlhnqt lvrqfqghtd
      541 gascidishd gtklwtggld ntvrswdlre grqlqqhdft sqifslgycp tgewlavgme
      601 ssnvevlhht kpdkyqlhlh escvlslkfa ycgkwfvstg kdnllnawrt pygasifqsk
      661 esssvlscdi saddkyivtg sgdkkatvye viy
//
LOCUS       XP_061013956             966 aa            linear   MAM 02-DEC-2023
DEFINITION  kinesin-like protein KIF23 isoform X1 [Dama dama].
ACCESSION   XP_061013956
VERSION     XP_061013956.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157973.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..966
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..966
                     /product="kinesin-like protein KIF23 isoform X1"
                     /calculated_mol_wt=110571
     Region          24..448
                     /region_name="KISc_KIF23_like"
                     /note="Kinesin motor domain, KIF23-like subgroup; cd01368"
                     /db_xref="CDD:276819"
     Site            order(33,112,115,117..120,351)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276819"
     Site            order(403,406,409)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276819"
     Region          512..>722
                     /region_name="PRK03918"
                     /note="DNA double-strand break repair ATPase Rad50"
                     /db_xref="CDD:235175"
     Region          810..913
                     /region_name="MKLP1_Arf_bdg"
                     /note="Arf6-interacting domain of mitotic kinesin-like
                     protein 1; pfam16540"
                     /db_xref="CDD:465166"
     CDS             1..966
                     /gene="KIF23"
                     /coded_by="XM_061157973.1:173..3073"
                     /db_xref="GeneID:133066664"
ORIGIN      
        1 mkpartktpr kppvkkgsqt slkdpvgvyc rvrplslpeq eccievinnt tvqlhtpegy
       61 rlnrngdyke tqysfkqvfg thttqkelfd vvanplvddl ihgkngllft ygvtgsgkth
      121 tmtgspgegg llprcldmlf nsigsfqakr yvfksndrns mdiqcevdal lerqkreatp
      181 npktpsskrq vdpefadmin vqefckaeev dedsvygvfv syieiynnyi ydlleempfd
      241 pikpkwnscs tpmrntdfvp pqskllredk nhnmyvagct evevksteea fevfwrgqkk
      301 rrianthlnh essrshsvfn iklvqaplda dgdnvlqeke qitisqlslv dlagsertnr
      361 tkaegnrlre agninqslmt lrtcmevlre nqtygtnkmv pyrdsklthl fknyfdgegk
      421 vrlivcvnpk aedyeeslqv mrfaevtqev evarptdkai cgltpgrryr nqaragpvgd
      481 eplvsevvlq sfpplpscel ldvndeqtlp rliealerrh hlrqmmidef nkqsinfkal
      541 lqefdnavln kenyiqgkln ekekvisgqk leierlekkn ktleykveil ektttiyeed
      601 krnlqqelet qnqklqrqfs dkrrlearlq gmvtettmkw ekecerrvaa kqlemqnklw
      661 vkdeklkqlk aivtepkaek perpsrerdr ekvtqrsvsp spvplssnyi aqisngqqlm
      721 sqqlhrrsns cssisvasci seweqkippy ntplnvtsia rrrqqepgqs ktcivsdrrr
      781 gmywnegrev vpsfrneigv eedrcsrnap pirlrhrrsr sagdrwvdhk patnlqtetv
      841 mqphvprait vsvanekala kcekymlthq elasdgeiet klikgdvykt rgggqsvqft
      901 eietlkqesp tsrkrrsstv apaqpdgtes ewtdvetrcs vavemragsq lgpgyqhhaq
      961 pkrkkp
//
LOCUS       XP_061013957             952 aa            linear   MAM 02-DEC-2023
DEFINITION  kinesin-like protein KIF23 isoform X2 [Dama dama].
ACCESSION   XP_061013957
VERSION     XP_061013957.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157974.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..952
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..952
                     /product="kinesin-like protein KIF23 isoform X2"
                     /calculated_mol_wt=108931
     Region          24..434
                     /region_name="KISc_KIF23_like"
                     /note="Kinesin motor domain, KIF23-like subgroup; cd01368"
                     /db_xref="CDD:276819"
     Site            order(33,112,115,117..120,337)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276819"
     Site            order(389,392,395)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276819"
     Region          498..>708
                     /region_name="PRK03918"
                     /note="DNA double-strand break repair ATPase Rad50"
                     /db_xref="CDD:235175"
     Region          796..899
                     /region_name="MKLP1_Arf_bdg"
                     /note="Arf6-interacting domain of mitotic kinesin-like
                     protein 1; pfam16540"
                     /db_xref="CDD:465166"
     CDS             1..952
                     /gene="KIF23"
                     /coded_by="XM_061157974.1:173..3031"
                     /db_xref="GeneID:133066664"
ORIGIN      
        1 mkpartktpr kppvkkgsqt slkdpvgvyc rvrplslpeq eccievinnt tvqlhtpegy
       61 rlnrngdyke tqysfkqvfg thttqkelfd vvanplvddl ihgkngllft ygvtgsgkth
      121 tmtgspgegg llprcldmlf nsigsfqakr yvfksndrns mdiqcevdal lerqkreatp
      181 npktpsskrq vdpefadmin vqefckaeev dedsvygvfv syieiynnyi ydlleempfd
      241 pikpkppqsk llredknhnm yvagctevev ksteeafevf wrgqkkrria nthlnhessr
      301 shsvfniklv qapldadgdn vlqekeqiti sqlslvdlag sertnrtkae gnrlreagni
      361 nqslmtlrtc mevlrenqty gtnkmvpyrd sklthlfkny fdgegkvrli vcvnpkaedy
      421 eeslqvmrfa evtqevevar ptdkaicglt pgrryrnqar agpvgdeplv sevvlqsfpp
      481 lpscelldvn deqtlprlie alerrhhlrq mmidefnkqs infkallqef dnavlnkeny
      541 iqgklnekek visgqkleie rlekknktle ykveilektt tiyeedkrnl qqeletqnqk
      601 lqrqfsdkrr learlqgmvt ettmkwekec errvaakqle mqnklwvkde klkqlkaivt
      661 epkaekperp srerdrekvt qrsvspspvp lssnyiaqis ngqqlmsqql hrrsnscssi
      721 svascisewe qkippyntpl nvtsiarrrq qepgqsktci vsdrrrgmyw negrevvpsf
      781 rneigveedr csrnappirl rhrrsrsagd rwvdhkpatn lqtetvmqph vpraitvsva
      841 nekalakcek ymlthqelas dgeietklik gdvyktrggg qsvqfteiet lkqesptsrk
      901 rrsstvapaq pdgtesewtd vetrcsvave mragsqlgpg yqhhaqpkrk kp
//
LOCUS       XP_061013958             889 aa            linear   MAM 02-DEC-2023
DEFINITION  kinesin-like protein KIF23 isoform X3 [Dama dama].
ACCESSION   XP_061013958
VERSION     XP_061013958.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157975.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..889
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..889
                     /product="kinesin-like protein KIF23 isoform X3"
                     /calculated_mol_wt=101848
     Region          24..448
                     /region_name="KISc_KIF23_like"
                     /note="Kinesin motor domain, KIF23-like subgroup; cd01368"
                     /db_xref="CDD:276819"
     Site            order(33,112,115,117..120,351)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276819"
     Site            order(403,406,409)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276819"
     Region          512..>722
                     /region_name="PRK03918"
                     /note="DNA double-strand break repair ATPase Rad50"
                     /db_xref="CDD:235175"
     Region          <807..836
                     /region_name="MKLP1_Arf_bdg"
                     /note="Arf6-interacting domain of mitotic kinesin-like
                     protein 1; pfam16540"
                     /db_xref="CDD:465166"
     CDS             1..889
                     /gene="KIF23"
                     /coded_by="XM_061157975.1:173..2842"
                     /db_xref="GeneID:133066664"
ORIGIN      
        1 mkpartktpr kppvkkgsqt slkdpvgvyc rvrplslpeq eccievinnt tvqlhtpegy
       61 rlnrngdyke tqysfkqvfg thttqkelfd vvanplvddl ihgkngllft ygvtgsgkth
      121 tmtgspgegg llprcldmlf nsigsfqakr yvfksndrns mdiqcevdal lerqkreatp
      181 npktpsskrq vdpefadmin vqefckaeev dedsvygvfv syieiynnyi ydlleempfd
      241 pikpkwnscs tpmrntdfvp pqskllredk nhnmyvagct evevksteea fevfwrgqkk
      301 rrianthlnh essrshsvfn iklvqaplda dgdnvlqeke qitisqlslv dlagsertnr
      361 tkaegnrlre agninqslmt lrtcmevlre nqtygtnkmv pyrdsklthl fknyfdgegk
      421 vrlivcvnpk aedyeeslqv mrfaevtqev evarptdkai cgltpgrryr nqaragpvgd
      481 eplvsevvlq sfpplpscel ldvndeqtlp rliealerrh hlrqmmidef nkqsinfkal
      541 lqefdnavln kenyiqgkln ekekvisgqk leierlekkn ktleykveil ektttiyeed
      601 krnlqqelet qnqklqrqfs dkrrlearlq gmvtettmkw ekecerrvaa kqlemqnklw
      661 vkdeklkqlk aivtepkaek perpsrerdr ekvtqrsvsp spvplssnyi aqisngqqlm
      721 sqqlhrrsns cssisvasci seweqkippy ntplnvtsia rrrqqepgqs ktcivsdrrr
      781 gmywnegrev vpsfrneigv eedrcsrgdv yktrgggqsv qfteietlkq esptsrkrrs
      841 stvapaqpdg tesewtdvet rcsvavemra gsqlgpgyqh haqpkrkkp
//
LOCUS       XP_061013959             875 aa            linear   MAM 02-DEC-2023
DEFINITION  kinesin-like protein KIF23 isoform X4 [Dama dama].
ACCESSION   XP_061013959
VERSION     XP_061013959.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157976.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..875
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..875
                     /product="kinesin-like protein KIF23 isoform X4"
                     /calculated_mol_wt=100208
     Region          24..434
                     /region_name="KISc_KIF23_like"
                     /note="Kinesin motor domain, KIF23-like subgroup; cd01368"
                     /db_xref="CDD:276819"
     Site            order(33,112,115,117..120,337)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276819"
     Site            order(389,392,395)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276819"
     Region          498..>708
                     /region_name="PRK03918"
                     /note="DNA double-strand break repair ATPase Rad50"
                     /db_xref="CDD:235175"
     Region          <793..822
                     /region_name="MKLP1_Arf_bdg"
                     /note="Arf6-interacting domain of mitotic kinesin-like
                     protein 1; pfam16540"
                     /db_xref="CDD:465166"
     CDS             1..875
                     /gene="KIF23"
                     /coded_by="XM_061157976.1:173..2800"
                     /db_xref="GeneID:133066664"
ORIGIN      
        1 mkpartktpr kppvkkgsqt slkdpvgvyc rvrplslpeq eccievinnt tvqlhtpegy
       61 rlnrngdyke tqysfkqvfg thttqkelfd vvanplvddl ihgkngllft ygvtgsgkth
      121 tmtgspgegg llprcldmlf nsigsfqakr yvfksndrns mdiqcevdal lerqkreatp
      181 npktpsskrq vdpefadmin vqefckaeev dedsvygvfv syieiynnyi ydlleempfd
      241 pikpkppqsk llredknhnm yvagctevev ksteeafevf wrgqkkrria nthlnhessr
      301 shsvfniklv qapldadgdn vlqekeqiti sqlslvdlag sertnrtkae gnrlreagni
      361 nqslmtlrtc mevlrenqty gtnkmvpyrd sklthlfkny fdgegkvrli vcvnpkaedy
      421 eeslqvmrfa evtqevevar ptdkaicglt pgrryrnqar agpvgdeplv sevvlqsfpp
      481 lpscelldvn deqtlprlie alerrhhlrq mmidefnkqs infkallqef dnavlnkeny
      541 iqgklnekek visgqkleie rlekknktle ykveilektt tiyeedkrnl qqeletqnqk
      601 lqrqfsdkrr learlqgmvt ettmkwekec errvaakqle mqnklwvkde klkqlkaivt
      661 epkaekperp srerdrekvt qrsvspspvp lssnyiaqis ngqqlmsqql hrrsnscssi
      721 svascisewe qkippyntpl nvtsiarrrq qepgqsktci vsdrrrgmyw negrevvpsf
      781 rneigveedr csrgdvyktr gggqsvqfte ietlkqespt srkrrsstva paqpdgtese
      841 wtdvetrcsv avemragsql gpgyqhhaqp krkkp
//
LOCUS       XP_061013960             114 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein P1 [Dama dama].
ACCESSION   XP_061013960
VERSION     XP_061013960.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157977.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..114
                     /product="large ribosomal subunit protein P1"
                     /calculated_mol_wt=11367
     Region          6..>63
                     /region_name="Ribosomal_P1"
                     /note="Ribosomal protein P1. This subfamily represents the
                     eukaryotic large ribosomal protein P1. Eukaryotic P1 and
                     P2 are functionally equivalent to the bacterial protein
                     L7/L12, but are not homologous to L7/L12. P1 is located in
                     the L12 stalk, with proteins...; cd05831"
                     /db_xref="CDD:100109"
     CDS             1..114
                     /gene="RPLP1"
                     /coded_by="XM_061157977.1:140..484"
                     /db_xref="GeneID:133066665"
ORIGIN      
        1 masvselaci ysalilhdde vtvtedkina likaagvnve pfwpglfaka lanvnigsli
       61 cnvgaggpap aagaapaggp apataaapae ekkveakkee seesdddmgf glfd
//
LOCUS       XP_061013961             330 aa            linear   MAM 02-DEC-2023
DEFINITION  membrane progestin receptor gamma [Dama dama].
ACCESSION   XP_061013961
VERSION     XP_061013961.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157978.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..330
                     /product="membrane progestin receptor gamma"
                     /calculated_mol_wt=37759
     Region          43..269
                     /region_name="HlyIII"
                     /note="Haemolysin-III related; pfam03006"
                     /db_xref="CDD:427098"
     CDS             1..330
                     /gene="PAQR5"
                     /coded_by="XM_061157978.1:1236..2228"
                     /db_xref="GeneID:133066667"
ORIGIN      
        1 mlslklprll nmeqvpqafh eqgilfgyrh pqssatacll slfqmtnetl niwthllpfw
       61 ffswrfvsil qatdvlndsy swpllvymga sclfplassc ahtfssmsrn arhicyfldy
      121 gavnlfslgc avaysayvfp dtlvsttfhd yyltlavlnt ivsiwlscys rffeiqkpgl
      181 ckmlrvlafa fpytwdslpi lfrvflfpge saeneatlyh qkhvamtlla sffysahlpe
      241 rlapgrfdyi ghshqlfhvc vilathmqme ailldktlrk ewllahcrpl lfaqiagail
      301 lclifslsni vyfsaalyri pepelhkket
//
LOCUS       XP_061013962             330 aa            linear   MAM 02-DEC-2023
DEFINITION  membrane progestin receptor gamma [Dama dama].
ACCESSION   XP_061013962
VERSION     XP_061013962.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157979.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..330
                     /product="membrane progestin receptor gamma"
                     /calculated_mol_wt=37759
     Region          43..269
                     /region_name="HlyIII"
                     /note="Haemolysin-III related; pfam03006"
                     /db_xref="CDD:427098"
     CDS             1..330
                     /gene="PAQR5"
                     /coded_by="XM_061157979.1:1327..2319"
                     /db_xref="GeneID:133066667"
ORIGIN      
        1 mlslklprll nmeqvpqafh eqgilfgyrh pqssatacll slfqmtnetl niwthllpfw
       61 ffswrfvsil qatdvlndsy swpllvymga sclfplassc ahtfssmsrn arhicyfldy
      121 gavnlfslgc avaysayvfp dtlvsttfhd yyltlavlnt ivsiwlscys rffeiqkpgl
      181 ckmlrvlafa fpytwdslpi lfrvflfpge saeneatlyh qkhvamtlla sffysahlpe
      241 rlapgrfdyi ghshqlfhvc vilathmqme ailldktlrk ewllahcrpl lfaqiagail
      301 lclifslsni vyfsaalyri pepelhkket
//
LOCUS       XP_061013963             330 aa            linear   MAM 02-DEC-2023
DEFINITION  membrane progestin receptor gamma [Dama dama].
ACCESSION   XP_061013963
VERSION     XP_061013963.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157980.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..330
                     /product="membrane progestin receptor gamma"
                     /calculated_mol_wt=37759
     Region          43..269
                     /region_name="HlyIII"
                     /note="Haemolysin-III related; pfam03006"
                     /db_xref="CDD:427098"
     CDS             1..330
                     /gene="PAQR5"
                     /coded_by="XM_061157980.1:2252..3244"
                     /db_xref="GeneID:133066667"
ORIGIN      
        1 mlslklprll nmeqvpqafh eqgilfgyrh pqssatacll slfqmtnetl niwthllpfw
       61 ffswrfvsil qatdvlndsy swpllvymga sclfplassc ahtfssmsrn arhicyfldy
      121 gavnlfslgc avaysayvfp dtlvsttfhd yyltlavlnt ivsiwlscys rffeiqkpgl
      181 ckmlrvlafa fpytwdslpi lfrvflfpge saeneatlyh qkhvamtlla sffysahlpe
      241 rlapgrfdyi ghshqlfhvc vilathmqme ailldktlrk ewllahcrpl lfaqiagail
      301 lclifslsni vyfsaalyri pepelhkket
//
LOCUS       XP_061013964             330 aa            linear   MAM 02-DEC-2023
DEFINITION  membrane progestin receptor gamma [Dama dama].
ACCESSION   XP_061013964
VERSION     XP_061013964.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157981.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..330
                     /product="membrane progestin receptor gamma"
                     /calculated_mol_wt=37759
     Region          43..269
                     /region_name="HlyIII"
                     /note="Haemolysin-III related; pfam03006"
                     /db_xref="CDD:427098"
     CDS             1..330
                     /gene="PAQR5"
                     /coded_by="XM_061157981.1:1489..2481"
                     /db_xref="GeneID:133066667"
ORIGIN      
        1 mlslklprll nmeqvpqafh eqgilfgyrh pqssatacll slfqmtnetl niwthllpfw
       61 ffswrfvsil qatdvlndsy swpllvymga sclfplassc ahtfssmsrn arhicyfldy
      121 gavnlfslgc avaysayvfp dtlvsttfhd yyltlavlnt ivsiwlscys rffeiqkpgl
      181 ckmlrvlafa fpytwdslpi lfrvflfpge saeneatlyh qkhvamtlla sffysahlpe
      241 rlapgrfdyi ghshqlfhvc vilathmqme ailldktlrk ewllahcrpl lfaqiagail
      301 lclifslsni vyfsaalyri pepelhkket
//
LOCUS       XP_061013965             330 aa            linear   MAM 02-DEC-2023
DEFINITION  membrane progestin receptor gamma [Dama dama].
ACCESSION   XP_061013965
VERSION     XP_061013965.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157982.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..330
                     /product="membrane progestin receptor gamma"
                     /calculated_mol_wt=37759
     Region          43..269
                     /region_name="HlyIII"
                     /note="Haemolysin-III related; pfam03006"
                     /db_xref="CDD:427098"
     CDS             1..330
                     /gene="PAQR5"
                     /coded_by="XM_061157982.1:242..1234"
                     /db_xref="GeneID:133066667"
ORIGIN      
        1 mlslklprll nmeqvpqafh eqgilfgyrh pqssatacll slfqmtnetl niwthllpfw
       61 ffswrfvsil qatdvlndsy swpllvymga sclfplassc ahtfssmsrn arhicyfldy
      121 gavnlfslgc avaysayvfp dtlvsttfhd yyltlavlnt ivsiwlscys rffeiqkpgl
      181 ckmlrvlafa fpytwdslpi lfrvflfpge saeneatlyh qkhvamtlla sffysahlpe
      241 rlapgrfdyi ghshqlfhvc vilathmqme ailldktlrk ewllahcrpl lfaqiagail
      301 lclifslsni vyfsaalyri pepelhkket
//
LOCUS       XP_061013966             330 aa            linear   MAM 02-DEC-2023
DEFINITION  membrane progestin receptor gamma [Dama dama].
ACCESSION   XP_061013966
VERSION     XP_061013966.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157983.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..330
                     /product="membrane progestin receptor gamma"
                     /calculated_mol_wt=37759
     Region          43..269
                     /region_name="HlyIII"
                     /note="Haemolysin-III related; pfam03006"
                     /db_xref="CDD:427098"
     CDS             1..330
                     /gene="PAQR5"
                     /coded_by="XM_061157983.1:234..1226"
                     /db_xref="GeneID:133066667"
ORIGIN      
        1 mlslklprll nmeqvpqafh eqgilfgyrh pqssatacll slfqmtnetl niwthllpfw
       61 ffswrfvsil qatdvlndsy swpllvymga sclfplassc ahtfssmsrn arhicyfldy
      121 gavnlfslgc avaysayvfp dtlvsttfhd yyltlavlnt ivsiwlscys rffeiqkpgl
      181 ckmlrvlafa fpytwdslpi lfrvflfpge saeneatlyh qkhvamtlla sffysahlpe
      241 rlapgrfdyi ghshqlfhvc vilathmqme ailldktlrk ewllahcrpl lfaqiagail
      301 lclifslsni vyfsaalyri pepelhkket
//
LOCUS       XP_061013967             617 aa            linear   MAM 02-DEC-2023
DEFINITION  D-glucuronyl C5-epimerase [Dama dama].
ACCESSION   XP_061013967
VERSION     XP_061013967.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157984.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..617
                     /product="D-glucuronyl C5-epimerase"
                     /calculated_mol_wt=69883
     Region          416..607
                     /region_name="C5-epim_C"
                     /note="D-glucuronyl C5-epimerase C-terminus; pfam06662"
                     /db_xref="CDD:461978"
     CDS             1..617
                     /gene="GLCE"
                     /coded_by="XM_061157984.1:212..2065"
                     /db_xref="GeneID:133066669"
ORIGIN      
        1 mrclaarvny ktliiicalf tlvtvllwnk cssdkaiqvp rhlssgfrvd alekraaase
       61 snnyvnhmak qseeafpqeq qkappvvggf innggskvlg lkyeeidcli ndehtikgrr
      121 egnevflpft wvekyfdvyg kvvqydgydr fefshsyskv yaqrapyhpd gvfmsfegyn
      181 vevrdrvkci sgvegvplst qwgpqgyfyp iqiaqyglsh ysknltekpp hievyetaed
      241 rdknskpndw tvpkgcfmas vadksrftnv kqfiapetse gvslqlgntk dfiisfdlkf
      301 ltngsvsvvl etteknqlft vhyvsntqli afkerdiyyg igprtswstv trdlvtdlrk
      361 gvglsntkav kptrimpkkv vrliakgkgf ldnitistta hmaaffaasd wlvrnqdekg
      421 gwpimvtrkl gegfkslepg wysamaqgqa istlvrayll tkdhiflnsa lratapykfl
      481 seqhgvkavf mnkhdwyeey pttpssfvln gfmysligly dlketagekl gkearslyer
      541 gmeslkamlp lydtgsgtiy dlrhfmlgia pnlarwdyht thinqlqlls tidespifke
      601 fvkrwksylk gsrakhn
//
LOCUS       XP_061013968             804 aa            linear   MAM 02-DEC-2023
DEFINITION  NADPH oxidase 5 [Dama dama].
ACCESSION   XP_061013968
VERSION     XP_061013968.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157985.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..804
                     /product="NADPH oxidase 5"
                     /calculated_mol_wt=91276
     Region          41..164
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     Region          <271..>497
                     /region_name="PLN02631"
                     /note="ferric-chelate reductase"
                     /db_xref="CDD:178238"
     Region          420..720
                     /region_name="NOX_Duox_like_FAD_NADP"
                     /note="NADPH oxidase (NOX) catalyzes the generation of
                     reactive oxygen species (ROS) such as superoxide and
                     hydrogen peroxide. ROS were originally identified as
                     bactericidal agents in phagocytes, but are now also
                     implicated in cell signaling and metabolism. NOX...;
                     cd06186"
                     /db_xref="CDD:99783"
     Site            order(448,462..465,479..481,485..488,629)
                     /site_type="other"
                     /note="FAD binding pocket [chemical binding]"
                     /db_xref="CDD:99783"
     Site            order(462,464..465)
                     /site_type="other"
                     /note="FAD binding motif [chemical binding]"
                     /db_xref="CDD:99783"
     Site            624..634
                     /site_type="other"
                     /note="NAD pyrophosphate binding region [chemical
                     binding]"
                     /db_xref="CDD:99783"
     Site            order(624,628..631,633)
                     /site_type="other"
                     /note="beta-alpha-beta stucture motif"
                     /db_xref="CDD:99783"
     Site            order(676..677,680)
                     /site_type="other"
                     /note="NADP ribose binding motif [chemical binding]"
                     /db_xref="CDD:99783"
     CDS             1..804
                     /gene="NOX5"
                     /coded_by="XM_061157985.1:107..2521"
                     /db_xref="GeneID:133066670"
ORIGIN      
        1 msapgdtawt dsegfrgtmt aeedakwlqw vthqfktiag kdgeinlqdf kkalqvkesf
       61 faerffvlfd sdgsgtitlq elqealtlli hgspmdklkf lfqvydvdgs gsvdpdelrt
      121 vlqaclhesa islpqekldq lalalfesad kdcsgtitfe elrdelqrvp evmenltisa
      181 arwltppapp rhqhpprplt saywhnhrsh alclavfvgl hvllfalaas ayrafgasvm
      241 vakgcgqcln fdcsfiavlm lrrcltwlra twlaqvlpld hniqfhqlmg yvvvglslvh
      301 tvahvvnfal qaqseaspfr fwelllttrp gigwvhglas ptgvalllll ilmfacsssc
      361 vrrrghfevf ywthlsylpm wlllilhgpn fwkwllvpgt lfflektisl aasrmaalni
      421 vevnllpskv thllikrppl fhyrpgdyly lnipsiarye whpftissap eqkdtiwlhi
      481 rsqgqwtnrl fesfkksdpv fcgskrlsrr lemkrsqrks qpgvqpqpid frasaqsava
      541 sskevtvelt syrpegtpwr ehegmvnmgt kdrtraqrea aaedrvlvse mcsenhqfcn
      601 ikcyidgpyg tptrrifase havligagig itpfasilqs ilyrhqkrkh icpscqhswm
      661 dsgqdedmkl hkvdfiwinr dqqsfewfvs lltklemdqa eetqegrfle lhmymtsals
      721 kndikaiglq maldllakke kkdsitglqt rtqpgrpdwn kvfqkvaaek kgkvqvffcg
      781 spalakilkg hceqfsfkff qenf
//
LOCUS       XP_061013969             285 aa            linear   MAM 02-DEC-2023
DEFINITION  acidic leucine-rich nuclear phosphoprotein 32 family member A [Dama
            dama].
ACCESSION   XP_061013969
VERSION     XP_061013969.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157986.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..285
                     /product="acidic leucine-rich nuclear phosphoprotein 32
                     family member A"
                     /calculated_mol_wt=31710
     Region          55..89
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          <107..182
                     /region_name="LRR_9"
                     /note="Leucine-rich repeat; pfam14580"
                     /db_xref="CDD:405295"
     Region          126..150
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          151..177
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..285
                     /gene="ANP32A"
                     /coded_by="XM_061157986.1:16..873"
                     /db_xref="GeneID:133066671"
ORIGIN      
        1 mkyevslegw gggvggdada tlaaltgakd ssrlpgrdel mrwgnalgag lsgkvkelvl
       61 dncrsnegki egltdefeel eflstinvgl tsvanlpkln klkklelsdn risgglevla
      121 ekcpnlthln lsgnkikdls tieplkklen lksldlfnce vtnlndyren vfkllpqlty
      181 ldgydrddke apdsdaegyv egldddeede deeeydedaq vvedeedeee eeegeeedvs
      241 geeeedeegy ndgevddeed eeelgeeerg qkrkrepede geddd
//
LOCUS       XP_061013970             475 aa            linear   MAM 02-DEC-2023
DEFINITION  coronin-2B [Dama dama].
ACCESSION   XP_061013970
VERSION     XP_061013970.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157987.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..475
                     /product="coronin-2B"
                     /calculated_mol_wt=54228
     Region          10..455
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          40..80
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          86..130
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          135..172
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          179..214
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          220..261
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          268..307
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..475
                     /gene="CORO2B"
                     /coded_by="XM_061157987.1:167..1594"
                     /db_xref="GeneID:133066672"
ORIGIN      
        1 mswrpqyrss kfrnvygkva nrehcfdgip itknvhdnhf cavnarflai vtesagggsf
       61 lvipleqtgr iepnypkvcg hqgnvldikw npfidniias csedtsvriw eipegglkrn
      121 mteallelhg hsrrvglvew hpttnnilfs agydykvliw nldvgepvkm idchsdvilc
      181 msfntdgsll tttckdkklr vieprsgrvl qeancknhrv nrvvflgnmk rllttgvsrw
      241 ntrqialwdq edlsmpliee eidglsgllf pfydadthml ylagkgdgni ryyeistekp
      301 ylsylmefrs papqkglgvm pkhgldvsac evfrfyklvt lkgliepism ivprrsdsyq
      361 ediypmtpgt epaltpdewl gginrdpvlm slkegykksp kmvfkapike kksvvvngid
      421 llenvpprte nellrmffrq qdeirrlkee laqkdirirq lqlelknlrn spknc
//
LOCUS       XP_061013971            1188 aa            linear   MAM 02-DEC-2023
DEFINITION  integrin alpha-11 [Dama dama].
ACCESSION   XP_061013971
VERSION     XP_061013971.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157988.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1188
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1188
                     /product="integrin alpha-11"
                     /calculated_mol_wt=133058
     Region          39..86
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          163..341
                     /region_name="vWA_integrins_alpha_subunit"
                     /note="Integrins are a class of adhesion receptors that
                     link the extracellular matrix to the cytoskeleton and
                     cooperate with growth factor receptors to promote celll
                     survival, cell cycle progression and cell migration.
                     Integrins consist of an alpha and a beta...; cd01469"
                     /db_xref="CDD:238746"
     Site            order(163,165,184,265,267,295,330)
                     /site_type="active"
                     /note="integrin inhibitor binding pocket [active]"
                     /db_xref="CDD:238746"
     Site            order(170,172,174,240,271)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238746"
     Site            order(172..174,176,240)
                     /site_type="active"
                     /note="integrin-collagen binding site [active]"
                     /db_xref="CDD:238746"
     Region          476..>519
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          538..592
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          636..1035
                     /region_name="Integrin_alpha2"
                     /note="Integrin alpha; pfam08441"
                     /db_xref="CDD:462478"
     CDS             1..1188
                     /gene="ITGA11"
                     /coded_by="XM_061157988.1:31..3597"
                     /db_xref="GeneID:133066673"
ORIGIN      
        1 mdlprgllva walslwpgft atfnmdtkkp rvipgsraaf fgytvqqhdi sgrkwlvvga
       61 pletnghqkt gdvykcpvae gnctklnlgr vtlsnvserk dnmrlglsla tnpkdnsfla
      121 csplwshecg ssyyttgmcs rvnsnfrfsk tvapalqrcq tymdivivld gsnsiypwve
      181 vqhflinilk kfyigpgqiq vgvvqygedv vhefhlndyr svrdvveaas hieqrggtet
      241 rtafgiefar seafqkggrk gakkvmivit dgeshdspdl ekviqqserd nvtryavavl
      301 gyynrrginp eaflneikyi asdpddkhff nvtdeaalkd ivdalgdrif slegtnknet
      361 sfglemsqtg fsshvvedgi llgavgaydw ngavlketss gkviplresy lkefpeelkn
      421 hgaylgytvt svvssrqgrv yvagaprfnh tgkvilftmh nnrsltihqa lqgeqigsyy
      481 gseitsvdvd edgvtdvllv gapmyfsegg ergrvyvynl rqdrfvyngt lkdshgyqna
      541 rfgssiasvr dlnqdsyndv vvgaplednh ggviyiyhgf qgsilktpkq ritaselapg
      601 lqyfgcsihg qldldedglv dlavgalgna vilwsrpvvq inaslhfeps kinifhrdck
      661 rsgrdatcla aflcftpvfl aphyqtatvg irynatmder rytprahlde ggdrytnraa
      721 llssgqehce rinfhvldta dyvkpvtfsi eysledpdyg pmlddgwptt lrvsvpfwng
      781 cnedehcvpd llldarsdlp tameycqrvl rkpvqdcsay tlsfdttvfi iestrrrvav
      841 eallenrgen aystvlnisq sanlqfasli qkddsdgsie cvneerrlhk kvcnvsypff
      901 wakakvafrl dfefsksifl hhleiqltag sdsdeeestk ednaallrlh lkyeadvlft
      961 rssslshyev ksnssleryh gtgppfhcvf kiqnlglfpi hgvmmkitvp iatrggnrll
     1021 llrdfltdqv ntscniwgns teyrhaptee dlsrapqlnh snsdvvsinc nvrlnpnqei
     1081 nfhllgnlwl rslkalkykl mritvhaalq rqfhspfifr eedpsrqitf eiskqedsqi
     1141 piwiivgstl ggllllallv lalwklgffk sakrrrepgl dptpkvle
//
LOCUS       XP_061013972             627 aa            linear   MAM 02-DEC-2023
DEFINITION  protein fem-1 homolog B isoform X1 [Dama dama].
ACCESSION   XP_061013972
VERSION     XP_061013972.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157989.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..627
                     /product="protein fem-1 homolog B isoform X1"
                     /calculated_mol_wt=70134
     Region          4..256
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          48..85
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(87,89,93..94,97..99,101..102,106,109,118,120,122,
                     126..127,130..132,134..135,139,142,151,153,155,159..160,
                     163..165,167..168,172,175)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          87..118
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          120..151
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          153..183
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          186..211
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          218..247
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <477..>577
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          483..529
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          531..570
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..627
                     /gene="FEM1B"
                     /coded_by="XM_061157989.1:135..2018"
                     /db_xref="GeneID:133066674"
ORIGIN      
        1 meglagyvyk aasegkvltl aalllnrses diryllgyvs qqggqrstpl iiaarnghak
       61 vvrlllehyr vqtqqtgtvr fdgyvidgat alwcaagagh fevvkllvsh ganvnhttvt
      121 nstplraacf dgrldivkyl vennanisia nkydntclmi aaykghtdvv rylleqradp
      181 nakahcgata lhfaaeaghi divkelikwr aaivvnghgm tplkvaaesc kadvvellls
      241 hadcdrrsri ealellgasf andrenydim ktyhylylam lerfqdgdni lekevlppih
      301 aygnrtecrn pqelesirqd rdalhmegli vrerilgadn idvshpiiyr gavyadnmef
      361 eqciklwlha lhlrqkgnrn thkdllrfaq vfsqmihlne tvkapdiecv lrcsvleieq
      421 smnrvknipd advhsamdny ecnlytflyl vcistktqcs eedqckinkq iynlihldpr
      481 tregftllhl avnsntpvdd fhtndvcsfp nalvtkllld cgaevnavdn egnsalhiiv
      541 qynrpisdfl tlhsiiislv eagahtdmtn kqnktpldks ttgvseillk tqmkmslkcl
      601 aaravrandi nyqdqiprtl eefvgfh
//
LOCUS       XP_061013973              83 aa            linear   MAM 02-DEC-2023
DEFINITION  protein fem-1 homolog B isoform X2 [Dama dama].
ACCESSION   XP_061013973
VERSION     XP_061013973.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157990.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..83
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..83
                     /product="protein fem-1 homolog B isoform X2"
                     /calculated_mol_wt=8988
     Region          11..>77
                     /region_name="Ank_2"
                     /note="Ankyrin repeats (3 copies); pfam12796"
                     /db_xref="CDD:463710"
     CDS             1..83
                     /gene="FEM1B"
                     /coded_by="XM_061157990.1:674..925"
                     /db_xref="GeneID:133066674"
ORIGIN      
        1 meglagyvyk aasegkvltl aalllnrses diryllgyvs qqggqrstpl iiaarnghak
       61 vvrlllehyr vqtqqtgtvr fdg
//
LOCUS       XP_061013974             651 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 SUMO-protein ligase PIAS1 [Dama dama].
ACCESSION   XP_061013974
VERSION     XP_061013974.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157991.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..651
                     /product="E3 SUMO-protein ligase PIAS1"
                     /calculated_mol_wt=71509
     Region          11..45
                     /region_name="SAP"
                     /note="Putative DNA-binding (bihelical) motif predicted to
                     be involved in chromosomal organisation; smart00513"
                     /db_xref="CDD:128789"
     Region          140..286
                     /region_name="PINIT"
                     /note="PINIT domain; pfam14324"
                     /db_xref="CDD:464136"
     Region          327..386
                     /region_name="SP-RING_PIAS1"
                     /note="SP-RING finger found in protein inhibitor of
                     activated STAT protein 1 (PIAS1) and similar proteins;
                     cd16818"
                     /db_xref="CDD:438467"
     CDS             1..651
                     /gene="PIAS1"
                     /coded_by="XM_061157991.1:49..2004"
                     /db_xref="GeneID:133066675"
ORIGIN      
        1 madsaelkqm vmslrvselq vllgyagrnk hgrkhelltk alhllkagcs pavqmkikel
       61 yrrrfpqkim tpadlsipnv hsspmpatls psaipqlayd ghpasspllp vsllgpkhel
      121 elphltpalh pvhpdiklqk lpfydlldel ikptslasdn sqrfretcfa faltpqqvqq
      181 isssmdisgt kcdftvqvql rfclsetscp qedhfppnlc vkvntkpcsl pgylpptkng
      241 vepkrpsrpi nitslvrlst tvpntivvsw taeigrnysm avylvkqlss tvllqrlrak
      301 girnpdhsra likekltadp dseiattslr vsllcplgkm rltipcralt cshlqcfdat
      361 lyiqmnekkp twvcpvcdkk apyehliidg lfmeilkyct dcdeiqfked gswapmrskk
      421 evqevsasyn gvdgclsstl ehqvashhqs snkskkvevi dltidsssde eeeepsakrt
      481 cpslsptspl nnkgilslph qaspvsrtps lpavdtsyin tsliqdyrhp fhmtpmpydl
      541 qgldffpfls gdnqhyntsl laaaaaavsd dqdllhssrf fpytssqmfl dqlsaggsss
      601 lpttngsssg snsslvssns lreshghpva srsstdtasi fgiipdiisl d
//
LOCUS       XP_061013975             340 aa            linear   MAM 02-DEC-2023
DEFINITION  ceroid-lipofuscinosis neuronal protein 6 isoform X1 [Dama dama].
ACCESSION   XP_061013975
VERSION     XP_061013975.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157992.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..340
                     /product="ceroid-lipofuscinosis neuronal protein 6 isoform
                     X1"
                     /calculated_mol_wt=38435
     Region          59..338
                     /region_name="CLN6"
                     /note="Ceroid-lipofuscinosis neuronal protein 6;
                     pfam15156"
                     /db_xref="CDD:464536"
     CDS             1..340
                     /gene="CLN6"
                     /coded_by="XM_061157992.1:29..1051"
                     /db_xref="GeneID:133066677"
ORIGIN      
        1 mfafaafgqr nlfaatggga kglagrlgme aaarrrqhpg aaggpsaqpg asflqarhsa
       61 vkadeaagta pfhldlwfyf tlqnwvldfg rpiamlvfpl ewfplnkpsv gdyfhmayni
      121 itpflllkli ercprtlprs liyvsiitfi mgasihlvgd svnhrlifsg yqnhlsvren
      181 piiknlkpet lidsfellyy ydeylghsmw yvpfflilfm yfsgcftpte aessmpgaam
      241 llvvpsglyy wylvtegqif ilfiftsfam lalvlhqkrk rlfldsnglf lfssfaltll
      301 lvalwvawlw ndpvlrkkyp gviyvpepwa fytlhvssqh
//
LOCUS       XP_061013976             340 aa            linear   MAM 02-DEC-2023
DEFINITION  ceroid-lipofuscinosis neuronal protein 6 isoform X1 [Dama dama].
ACCESSION   XP_061013976
VERSION     XP_061013976.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157993.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..340
                     /product="ceroid-lipofuscinosis neuronal protein 6 isoform
                     X1"
                     /calculated_mol_wt=38435
     Region          59..338
                     /region_name="CLN6"
                     /note="Ceroid-lipofuscinosis neuronal protein 6;
                     pfam15156"
                     /db_xref="CDD:464536"
     CDS             1..340
                     /gene="CLN6"
                     /coded_by="XM_061157993.1:29..1051"
                     /db_xref="GeneID:133066677"
ORIGIN      
        1 mfafaafgqr nlfaatggga kglagrlgme aaarrrqhpg aaggpsaqpg asflqarhsa
       61 vkadeaagta pfhldlwfyf tlqnwvldfg rpiamlvfpl ewfplnkpsv gdyfhmayni
      121 itpflllkli ercprtlprs liyvsiitfi mgasihlvgd svnhrlifsg yqnhlsvren
      181 piiknlkpet lidsfellyy ydeylghsmw yvpfflilfm yfsgcftpte aessmpgaam
      241 llvvpsglyy wylvtegqif ilfiftsfam lalvlhqkrk rlfldsnglf lfssfaltll
      301 lvalwvawlw ndpvlrkkyp gviyvpepwa fytlhvssqh
//
LOCUS       XP_061013977             286 aa            linear   MAM 02-DEC-2023
DEFINITION  ceroid-lipofuscinosis neuronal protein 6 isoform X2 [Dama dama].
ACCESSION   XP_061013977
VERSION     XP_061013977.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157994.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..286
                     /product="ceroid-lipofuscinosis neuronal protein 6 isoform
                     X2"
                     /calculated_mol_wt=32337
     Region          59..>265
                     /region_name="CLN6"
                     /note="Ceroid-lipofuscinosis neuronal protein 6;
                     pfam15156"
                     /db_xref="CDD:464536"
     CDS             1..286
                     /gene="CLN6"
                     /coded_by="XM_061157994.1:38..898"
                     /db_xref="GeneID:133066677"
ORIGIN      
        1 mfafaafgqr nlfaatggga kglagrlgme aaarrrqhpg aaggpsaqpg asflqarhsa
       61 vkadeaagta pfhldlwfyf tlqnwvldfg rpiamlvfpl ewfplnkpsv gdyfhmayni
      121 itpflllkli ercprtlprs liyvsiitfi mgasihlvgd svnhrlifsg yqnhlsvren
      181 piiknlkpet lidsfellyy ydeylghsmw yvpfflilfm yfsgcftpte aessmpgaam
      241 llvvpsglyy wrilyhrttr ellvffqlll swgcrriens letkqq
//
LOCUS       XP_061013978             183 aa            linear   MAM 02-DEC-2023
DEFINITION  calmodulin-like protein 4 isoform X1 [Dama dama].
ACCESSION   XP_061013978
VERSION     XP_061013978.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157995.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..183
                     /product="calmodulin-like protein 4 isoform X1"
                     /calculated_mol_wt=20842
     Region          37..174
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..183
                     /gene="CALML4"
                     /coded_by="XM_061157995.1:812..1363"
                     /db_xref="GeneID:133066678"
ORIGIN      
        1 makflsqdqi natvgrwstv tgwglgkvlg pslgqrqtqt eeykecfsly dkqqrgkika
       61 tdlltvmrcl gasptpgevr rhlqtqgidr ngeldfstfl timhmqikqe dpkkeillam
      121 lmadkekkgy imaselrsrl mqlgekltpk evedlfread iepngkvkyd efiqkitipv
      181 rdy
//
LOCUS       XP_061013979             153 aa            linear   MAM 02-DEC-2023
DEFINITION  calmodulin-like protein 4 isoform X2 [Dama dama].
ACCESSION   XP_061013979
VERSION     XP_061013979.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157996.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..153
                     /product="calmodulin-like protein 4 isoform X2"
                     /calculated_mol_wt=17689
     Region          1..144
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..153
                     /gene="CALML4"
                     /coded_by="XM_061157996.1:145..606"
                     /db_xref="GeneID:133066678"
ORIGIN      
        1 makflsqdqi neykecfsly dkqqrgkika tdlltvmrcl gasptpgevr rhlqtqgidr
       61 ngeldfstfl timhmqikqe dpkkeillam lmadkekkgy imaselrsrl mqlgekltpk
      121 evedlfread iepngkvkyd efiqkitipv rdy
//
LOCUS       XP_061013980             965 aa            linear   MAM 02-DEC-2023
DEFINITION  SKI family transcriptional corepressor 1 isoform X1 [Dama dama].
ACCESSION   XP_061013980
VERSION     XP_061013980.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157997.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..965
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..965
                     /product="SKI family transcriptional corepressor 1 isoform
                     X1"
                     /calculated_mol_wt=99665
     Region          77..167
                     /region_name="DHD_Skor"
                     /note="Dachshund-homology domain found in SKI family
                     transcriptional corepressors, Skor1, Skor2 and similar
                     proteins; cd21080"
                     /db_xref="CDD:410783"
     Region          180..272
                     /region_name="c-SKI_SMAD_bind"
                     /note="c-SKI Smad4 binding domain; smart01046"
                     /db_xref="CDD:198114"
     Region          861..>936
                     /region_name="OmpH"
                     /note="Outer membrane protein (OmpH-like); pfam03938"
                     /db_xref="CDD:461098"
     CDS             1..965
                     /gene="SKOR1"
                     /coded_by="XM_061157997.1:1..2898"
                     /db_xref="GeneID:133066679"
ORIGIN      
        1 mallcglgqv tlrlwaplpp qpenrigfpa tqaflrsggm ealtsqlgpg regnsspnsk
       61 qelqpysgss alkpnqvget slygvpivsl vidgqerlcl aqisntllkn ysyneihnrr
      121 valgitcvqc tpvqleilrr agampissrr cgmitkreae rlcksflgeh kppklpenfa
      181 fdvvhecawg srgsfipary nssrakcikc gycsmyfspn kfifhshrtp dakytqpdaa
      241 nfnswrrhlk lsdksatdel shawedvkam fnggtrkrtf slqgggggga nggsggqgkg
      301 gagggggggg gpgcgadmap gppphkslrc geeeaagppg pppphaqrgl glaagaggpa
      361 gpggpgggag vrsypvipvp skgfgllqkl ppplfphpyg fptafglcpk kddpvlgage
      421 pkggpgpgsg ggagtgagag gpgtghlppg agtgpgggam fwghqpsgaa kdaaavaaaa
      481 aaatvyptfp mfwpaagslp vppypaaqsq akavaaavaa aaaaaaaaag gggpepldgt
      541 eptkegglva eercpsalsr gpldedgade alppplapla pppppparkg syvsafrpvv
      601 kdaesiakly gstreayggg pargpgpgag tgggyvspdf lsegsssyhs aspdvdtade
      661 pevdvesnrf pddegapdea epgapstggs pngdqtagpp sitssgadgp tdspeggspr
      721 prrrpglppa sraafgdlva ddivrrpeks ppsgsyelre acgplggpap akvyaperde
      781 hvksaaaalg paasylcape ahepdkednh staddletrk cypdqrsisq pspantdrge
      841 dgltldvtgt qlvekdienl ardelqklll eqmelrkkle refqslkdnf qdqmkrelay
      901 reemvqqlqi vrdtlcneld qerkaryaiq qklkeahdal hhfsckmltp rhctgncsfk
      961 ppllp
//
LOCUS       XP_061013981             926 aa            linear   MAM 02-DEC-2023
DEFINITION  SKI family transcriptional corepressor 1 isoform X2 [Dama dama].
ACCESSION   XP_061013981
VERSION     XP_061013981.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157998.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..926
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..926
                     /product="SKI family transcriptional corepressor 1 isoform
                     X2"
                     /calculated_mol_wt=95505
     Region          38..128
                     /region_name="DHD_Skor"
                     /note="Dachshund-homology domain found in SKI family
                     transcriptional corepressors, Skor1, Skor2 and similar
                     proteins; cd21080"
                     /db_xref="CDD:410783"
     Region          141..233
                     /region_name="c-SKI_SMAD_bind"
                     /note="c-SKI Smad4 binding domain; smart01046"
                     /db_xref="CDD:198114"
     Region          822..>897
                     /region_name="OmpH"
                     /note="Outer membrane protein (OmpH-like); pfam03938"
                     /db_xref="CDD:461098"
     CDS             1..926
                     /gene="SKOR1"
                     /coded_by="XM_061157998.1:138..2918"
                     /db_xref="GeneID:133066679"
ORIGIN      
        1 mealtsqlgp gregnsspns kqelqpysgs salkpnqvge tslygvpivs lvidgqerlc
       61 laqisntllk nysyneihnr rvalgitcvq ctpvqleilr ragampissr rcgmitkrea
      121 erlcksflge hkppklpenf afdvvhecaw gsrgsfipar ynssrakcik cgycsmyfsp
      181 nkfifhshrt pdakytqpda anfnswrrhl klsdksatde lshawedvka mfnggtrkrt
      241 fslqgggggg anggsggqgk ggaggggggg ggpgcgadma pgppphkslr cgeeeaagpp
      301 gpppphaqrg lglaagaggp agpggpggga gvrsypvipv pskgfgllqk lppplfphpy
      361 gfptafglcp kkddpvlgag epkggpgpgs gggagtgaga ggpgtghlpp gagtgpggga
      421 mfwghqpsga akdaaavaaa aaaatvyptf pmfwpaagsl pvppypaaqs qakavaaava
      481 aaaaaaaaaa ggggpepldg teptkegglv aeercpsals rgpldedgad ealppplapl
      541 appppppark gsyvsafrpv vkdaesiakl ygstreaygg gpargpgpga gtgggyvspd
      601 flsegsssyh saspdvdtad epevdvesnr fpddegapde aepgapstgg spngdqtagp
      661 psitssgadg ptdspeggsp rprrrpglpp asraafgdlv addivrrpek sppsgsyelr
      721 eacgplggpa pakvyaperd ehvksaaaal gpaasylcap eahepdkedn hstaddletr
      781 kcypdqrsis qpspantdrg edgltldvtg tqlvekdien lardelqkll leqmelrkkl
      841 erefqslkdn fqdqmkrela yreemvqqlq ivrdtlcnel dqerkaryai qqklkeahda
      901 lhhfsckmlt prhctgncsf kppllp
//
LOCUS       XP_061013982             437 aa            linear   MAM 02-DEC-2023
DEFINITION  dual specificity mitogen-activated protein kinase kinase 5 [Dama
            dama].
ACCESSION   XP_061013982
VERSION     XP_061013982.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061157999.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..437
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..437
                     /product="dual specificity mitogen-activated protein
                     kinase kinase 5"
                     /calculated_mol_wt=48809
     Region          6..96
                     /region_name="PB1_Map2k5"
                     /note="PB1 domain is essential part of the
                     mitogen-activated protein kinase kinase 5 (Map2k5, alias
                     MEK5) one of the key member of the signaling kinases
                     cascade which involved in angiogenesis and early
                     cardiovascular development. The PB1 domain of Map2k5...;
                     cd06395"
                     /db_xref="CDD:99717"
     Site            order(53,55,57,66)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99717"
     Region          153..431
                     /region_name="PKc_MKK5"
                     /note="Catalytic domain of the dual-specificity Protein
                     Kinase, Mitogen-activated protein Kinase Kinase 5;
                     cd06619"
                     /db_xref="CDD:132950"
     Site            order(161..165,169,182,184,214,230..233,236..237,240,272,
                     274..277,279,289..290,293,305..308,310,337,346)
                     /site_type="active"
                     /db_xref="CDD:132950"
     Site            order(161..165,167,169,182,184,214,230..233,236..237,
                     239..240,274,276..277,279,290)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:132950"
     Site            order(164..165,272,274..276,293,305..308,310,337,346)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:132950"
     Site            289..310
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:132950"
     CDS             1..437
                     /gene="MAP2K5"
                     /coded_by="XM_061157999.1:611..1924"
                     /db_xref="GeneID:133066680"
ORIGIN      
        1 menqvlviri kipnsgavdw tvhsgpqllf rdvldvigqv lpeatttafe yededgdrit
       61 vrsdeemkam lsyyystime qqvngqliep lqifprackp pgernihglk vntragpsqh
      121 sspavsdslp snslkkssae lkkilangqm neqdiryrdt lghgnggtvy kayhvpsgki
      181 lavkvilldi tlelqkqims eleilykcds syiigfygaf fvenrisict efmdggsldv
      241 yrkipehvlg riavavvkgl tylwslkilh rdvkpsnmlv ntrgqvklcd fgvstqlvns
      301 iaktyvgtna ymaperisge qygihsdvws lgisfmelal grfpypqiqk nqgslmplql
      361 lqcivdedsp vlpvgefsep fvhfitqcmr kqpkerpape elmghpfivq fndgnatvvs
      421 mwvcraleer rsqqgpp
//
LOCUS       XP_061013983             157 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C15orf61 homolog [Dama dama].
ACCESSION   XP_061013983
VERSION     XP_061013983.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158000.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..157
                     /product="uncharacterized protein C15orf61 homolog"
                     /calculated_mol_wt=17915
     Region          29..154
                     /region_name="DUF4528"
                     /note="Domain of unknown function (DUF4528); pfam15031"
                     /db_xref="CDD:434406"
     CDS             1..157
                     /gene="C12H15orf61"
                     /coded_by="XM_061158000.1:51..524"
                     /db_xref="GeneID:133066681"
ORIGIN      
        1 mealrrahea vlrlllwrpw aagaasrpkp rasevltrhl lqrrlphwts fcvpysavrn
       61 dqfglshfnw pvqganyhvl rtgcfpfiky hcskapwqdl agqdrfftal kvvnlgiptl
      121 lyglgswlfa rvtetvhtsy gpitvyflnk edegamy
//
LOCUS       XP_061013984             315 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha- and gamma-adaptin-binding protein p34 [Dama dama].
ACCESSION   XP_061013984
VERSION     XP_061013984.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158001.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..315
                     /product="alpha- and gamma-adaptin-binding protein p34"
                     /calculated_mol_wt=34475
     Region          <79..136
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Region          155..294
                     /region_name="Adaptin_binding"
                     /note="Alpha and gamma adaptin binding protein p34;
                     pfam10199"
                     /db_xref="CDD:462994"
     CDS             1..315
                     /gene="AAGAB"
                     /coded_by="XM_061158001.1:45..992"
                     /db_xref="GeneID:133066682"
ORIGIN      
        1 maagvpcalv tscsstfsad rlvqhilgte dvvvevtand avrfypwtid nkyysadinl
       61 cvvpnkflvt aeiaesvqaf vvyfdstqks gldsvsswlp laeswlpevm ilvcdrvsen
      121 gvnrqkaqew cikhgfelve lspeelpeed ddfpestgvk rivqalnanv wsnvvmkner
      181 nqglnllssl tganhsigsa etchseqpcg paaertesls dhrgaasdta dvqvdsivdp
      241 mldldiqela slttgggdle nferlfsklk emkdkaatlp heqrkmhaek vakafwmaig
      301 gdrdeiegls sdeeh
//
LOCUS       XP_061013985             425 aa            linear   MAM 02-DEC-2023
DEFINITION  mothers against decapentaplegic homolog 3 isoform X1 [Dama dama].
ACCESSION   XP_061013985
VERSION     XP_061013985.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158002.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..425
                     /product="mothers against decapentaplegic homolog 3
                     isoform X1"
                     /calculated_mol_wt=47950
     Region          8..132
                     /region_name="MH1_SMAD_2_3"
                     /note="N-terminal Mad Homology 1 (MH1) domain in SMAD2 and
                     SMAD3; cd10491"
                     /db_xref="CDD:199815"
     Site            order(33,37,70,74..78,81,100..101)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:199815"
     Site            order(64,109,121,126)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:199815"
     Region          224..414
                     /region_name="MH2_SMAD_2_3"
                     /note="C-terminal Mad Homology 2 (MH2) domain in SMAD2 and
                     SMAD3; cd10985"
                     /db_xref="CDD:199826"
     Site            order(241,246..247,249,260..264,268,272,275,277..278,
                     284..285,287..289,292,361,364,367,371,373,377..379,384,
                     386,390,395,397,399,401,404..405,407..408,411..412)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:199826"
     CDS             1..425
                     /gene="SMAD3"
                     /coded_by="XM_061158002.1:70..1347"
                     /db_xref="GeneID:133066684"
ORIGIN      
        1 mssilpftpp ivkrllgwkk geqngqeekw cekavkslvk klkktgqlde lekaittqnv
       61 ntkcitiprs ldgrlqvshr kglphviycr lwrwpdlhsh helramelce fafnmkkdev
      121 cvnpyhyqrv etpvlppvlv prhteipaef pplddyshsi pentnfpagi epqsnipetp
      181 ppgylsedge tsdhqmnhsm dagspnlspn pmspahnnld lqpvtycepa fwcsisyyel
      241 nqrvgetfha sqpsmtvdgf tdpsnserfc lgllsnvnrn aaveltrrhi grgvrlyyig
      301 gevfaeclsd saifvqspnc nqrygwhpat vckippgcnl kifnnqefaa llaqsvnqgf
      361 eavyqltrmc tirmsfvkgw gaeyrrqtvt stpcwielhl ngplqwldkv ltqmgspsir
      421 cssvs
//
LOCUS       XP_061013986             320 aa            linear   MAM 02-DEC-2023
DEFINITION  mothers against decapentaplegic homolog 3 isoform X2 [Dama dama].
ACCESSION   XP_061013986
VERSION     XP_061013986.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158003.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..320
                     /product="mothers against decapentaplegic homolog 3
                     isoform X2"
                     /calculated_mol_wt=35764
     Region          <1..27
                     /region_name="MH1"
                     /note="N-terminal Mad Homology 1 (MH1) domain; cl00055"
                     /db_xref="CDD:469592"
     Region          119..309
                     /region_name="MH2_SMAD_2_3"
                     /note="C-terminal Mad Homology 2 (MH2) domain in SMAD2 and
                     SMAD3; cd10985"
                     /db_xref="CDD:199826"
     Site            order(136,141..142,144,155..159,163,167,170,172..173,
                     179..180,182..184,187,256,259,262,266,268,272..274,279,
                     281,285,290,292,294,296,299..300,302..303,306..307)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:199826"
     CDS             1..320
                     /gene="SMAD3"
                     /coded_by="XM_061158003.1:144..1106"
                     /db_xref="GeneID:133066684"
ORIGIN      
        1 melcefafnm kkdevcvnpy hyqrvetpvl ppvlvprhte ipaefppldd yshsipentn
       61 fpagiepqsn ipetpppgyl sedgetsdhq mnhsmdagsp nlspnpmspa hnnldlqpvt
      121 ycepafwcsi syyelnqrvg etfhasqpsm tvdgftdpsn serfclglls nvnrnaavel
      181 trrhigrgvr lyyiggevfa eclsdsaifv qspncnqryg whpatvckip pgcnlkifnn
      241 qefaallaqs vnqgfeavyq ltrmctirms fvkgwgaeyr rqtvtstpcw ielhlngplq
      301 wldkvltqmg spsircssvs
//
LOCUS       XP_061013987             498 aa            linear   MAM 02-DEC-2023
DEFINITION  mothers against decapentaplegic homolog 6 [Dama dama].
ACCESSION   XP_061013987
VERSION     XP_061013987.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158004.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..498
                     /product="mothers against decapentaplegic homolog 6"
                     /calculated_mol_wt=53669
     Region          161..274
                     /region_name="MH1_SMAD_6"
                     /note="N-terminal Mad Homology 1 (MH1) domain in SMAD6;
                     cd10493"
                     /db_xref="CDD:199817"
     Site            order(175,179,182,215..216,239)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:199817"
     Site            order(206,248,261,266)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:199817"
     Region          323..496
                     /region_name="MH2_SMAD_6"
                     /note="C-terminal Mad Homology 2 (MH2) domain in SMAD6;
                     cd10499"
                     /db_xref="CDD:199824"
     Site            order(338,346..347,349,358..362,366,370..373,375..376,382,
                     386..387,389,460,484,491,493,495)
                     /site_type="other"
                     /note="putative trimer interface [polypeptide binding]"
                     /db_xref="CDD:199824"
     CDS             1..498
                     /gene="SMAD6"
                     /coded_by="XM_061158004.1:847..2343"
                     /db_xref="GeneID:133066685"
ORIGIN      
        1 mfrskrsglv rrlwrsrvvp dreegggggg ggggdedgsv gsraepaara regggcgrpe
       61 vrpvalrrpr davgqrgaqg agrrrrsggp prpmsepgag sggssldvge pggqgwlpes
      121 dcetvtcclf serdaagapr eageplvgea qepegggrsr earsrlllle qelktvtysl
      181 lkrlkersld tlleavesrg gvpggcvlvp radlrlggqp appqlllgrl frwpdlqhav
      241 elkplcgchs faaaadgptv ccnpyhfsrl cgpesppppy srlsprdeyk pldlsdstls
      301 yteteatnsl itapgefsda smspdatkps hwcsvayweh rtrvgrlyav ydqavsifyd
      361 lpqgsgfclg qlnleqrses vrrtrskigf gillskepdg vwaynrgehp ifvnsptlda
      421 pggralvvrk vppgysikvf dfersgllqh gpepdaadgp ydpnsvrisf akgwgpcysr
      481 qfitscpcwl eillnnhr
//
LOCUS       XP_061013989             592 aa            linear   MAM 02-DEC-2023
DEFINITION  protein zwilch homolog isoform X1 [Dama dama].
ACCESSION   XP_061013989
VERSION     XP_061013989.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158006.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..592
                     /product="protein zwilch homolog isoform X1"
                     /calculated_mol_wt=66343
     Region          31..574
                     /region_name="Zwilch"
                     /note="RZZ complex, subunit zwilch; pfam09817"
                     /db_xref="CDD:401684"
     CDS             1..592
                     /gene="ZWILCH"
                     /coded_by="XM_061158006.1:103..1881"
                     /db_xref="GeneID:133066686"
ORIGIN      
        1 mwsganraae efyagllqef deekkgickg pfiyaadvqv qliskgqpnp lknilhenet
       61 mfivekvple keepshveel qseetaisdl stgenvglla lpvgrarqli gfytmahnpn
      121 mthlklnrpv aalpplwvrc dgsdpegisw lgaellstss svtgvvlymv tcrvdknysv
      181 nledlkkshk krhhlstlta sgfaryelfk stalddtvaa sqttitldis wspvdeilqt
      241 pplssaatln ikvesgeprg plsqlhrelk fllvladglr tgvtewpesl eaksavelvq
      301 eflnelnkln efgdstkkdt evvkndaaav dgsveclltv rgdldfaeql wckmsssvis
      361 yqdlvkcftl viqslqhgai qpwlhsgscs llsklihqsy hgtmdtvsls gtvpvqmlle
      421 igldklkkdy icffigqela slnhleyfis psvdtqeqvh rvqklhhile ivvscmlfik
      481 pqhellfslt qscikyyeqn pldeqhifql pvrptavkdl yqnekpqkwr veinsgqkkv
      541 ktiwqlsdsp pvdhlnfhrp gkddfseltl ngsleerisf tymvtcsqvh fk
//
LOCUS       XP_061013990             592 aa            linear   MAM 02-DEC-2023
DEFINITION  protein zwilch homolog isoform X1 [Dama dama].
ACCESSION   XP_061013990
VERSION     XP_061013990.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158007.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..592
                     /product="protein zwilch homolog isoform X1"
                     /calculated_mol_wt=66343
     Region          31..574
                     /region_name="Zwilch"
                     /note="RZZ complex, subunit zwilch; pfam09817"
                     /db_xref="CDD:401684"
     CDS             1..592
                     /gene="ZWILCH"
                     /coded_by="XM_061158007.1:103..1881"
                     /db_xref="GeneID:133066686"
ORIGIN      
        1 mwsganraae efyagllqef deekkgickg pfiyaadvqv qliskgqpnp lknilhenet
       61 mfivekvple keepshveel qseetaisdl stgenvglla lpvgrarqli gfytmahnpn
      121 mthlklnrpv aalpplwvrc dgsdpegisw lgaellstss svtgvvlymv tcrvdknysv
      181 nledlkkshk krhhlstlta sgfaryelfk stalddtvaa sqttitldis wspvdeilqt
      241 pplssaatln ikvesgeprg plsqlhrelk fllvladglr tgvtewpesl eaksavelvq
      301 eflnelnkln efgdstkkdt evvkndaaav dgsveclltv rgdldfaeql wckmsssvis
      361 yqdlvkcftl viqslqhgai qpwlhsgscs llsklihqsy hgtmdtvsls gtvpvqmlle
      421 igldklkkdy icffigqela slnhleyfis psvdtqeqvh rvqklhhile ivvscmlfik
      481 pqhellfslt qscikyyeqn pldeqhifql pvrptavkdl yqnekpqkwr veinsgqkkv
      541 ktiwqlsdsp pvdhlnfhrp gkddfseltl ngsleerisf tymvtcsqvh fk
//
LOCUS       XP_061013991             592 aa            linear   MAM 02-DEC-2023
DEFINITION  protein zwilch homolog isoform X1 [Dama dama].
ACCESSION   XP_061013991
VERSION     XP_061013991.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158008.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..592
                     /product="protein zwilch homolog isoform X1"
                     /calculated_mol_wt=66343
     Region          31..574
                     /region_name="Zwilch"
                     /note="RZZ complex, subunit zwilch; pfam09817"
                     /db_xref="CDD:401684"
     CDS             1..592
                     /gene="ZWILCH"
                     /coded_by="XM_061158008.1:103..1881"
                     /db_xref="GeneID:133066686"
ORIGIN      
        1 mwsganraae efyagllqef deekkgickg pfiyaadvqv qliskgqpnp lknilhenet
       61 mfivekvple keepshveel qseetaisdl stgenvglla lpvgrarqli gfytmahnpn
      121 mthlklnrpv aalpplwvrc dgsdpegisw lgaellstss svtgvvlymv tcrvdknysv
      181 nledlkkshk krhhlstlta sgfaryelfk stalddtvaa sqttitldis wspvdeilqt
      241 pplssaatln ikvesgeprg plsqlhrelk fllvladglr tgvtewpesl eaksavelvq
      301 eflnelnkln efgdstkkdt evvkndaaav dgsveclltv rgdldfaeql wckmsssvis
      361 yqdlvkcftl viqslqhgai qpwlhsgscs llsklihqsy hgtmdtvsls gtvpvqmlle
      421 igldklkkdy icffigqela slnhleyfis psvdtqeqvh rvqklhhile ivvscmlfik
      481 pqhellfslt qscikyyeqn pldeqhifql pvrptavkdl yqnekpqkwr veinsgqkkv
      541 ktiwqlsdsp pvdhlnfhrp gkddfseltl ngsleerisf tymvtcsqvh fk
//
LOCUS       XP_061013992             589 aa            linear   MAM 02-DEC-2023
DEFINITION  protein zwilch homolog isoform X2 [Dama dama].
ACCESSION   XP_061013992
VERSION     XP_061013992.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158009.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..589
                     /product="protein zwilch homolog isoform X2"
                     /calculated_mol_wt=66043
     Region          31..571
                     /region_name="Zwilch"
                     /note="RZZ complex, subunit zwilch; pfam09817"
                     /db_xref="CDD:401684"
     CDS             1..589
                     /gene="ZWILCH"
                     /coded_by="XM_061158009.1:103..1872"
                     /db_xref="GeneID:133066686"
ORIGIN      
        1 mwsganraae efyagllqef deekkgickg pfiyaadvqv qliskgqpnp lknilhenet
       61 mfivekvple keepshveel qseetaisdl stgenvglla lpvgrarqli gfytmahnpn
      121 mthlklnrpv aalpplwvrc dgsdpegisw lgaellstss svtgvvlymv tcrvdknysv
      181 nledlkkshk krhhlstlta sgfaryelfk stalddtvaa sqttitldis wspvdeilqt
      241 pplssaatln ikvesgeprg plsqlhrelk fllvladglr tgvtewpesl eaksavelvq
      301 eflnelnkln efgdstkkdt evvkndaaav dgsveclltv rgdldfaeql wckmsssvis
      361 yqdlvkcftl viqslqhgai qpwlhsgscs llsklihqsy hgtmdtvsls gtvpvqmlle
      421 igldklkkdy icffigqela slnhleyfis psvdtqeqvh rvqklhhile ivvscmlfik
      481 pqhellfslt qscikyyeqn pldeqhifql pvrptavkdl yqnekpqkwr veinsgqkkv
      541 ktiwqlsdsp pvdhlnfhrp dfseltlngs leerisftym vtcsqvhfk
//
LOCUS       XP_061013993             589 aa            linear   MAM 02-DEC-2023
DEFINITION  protein zwilch homolog isoform X2 [Dama dama].
ACCESSION   XP_061013993
VERSION     XP_061013993.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158010.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..589
                     /product="protein zwilch homolog isoform X2"
                     /calculated_mol_wt=66043
     Region          31..571
                     /region_name="Zwilch"
                     /note="RZZ complex, subunit zwilch; pfam09817"
                     /db_xref="CDD:401684"
     CDS             1..589
                     /gene="ZWILCH"
                     /coded_by="XM_061158010.1:103..1872"
                     /db_xref="GeneID:133066686"
ORIGIN      
        1 mwsganraae efyagllqef deekkgickg pfiyaadvqv qliskgqpnp lknilhenet
       61 mfivekvple keepshveel qseetaisdl stgenvglla lpvgrarqli gfytmahnpn
      121 mthlklnrpv aalpplwvrc dgsdpegisw lgaellstss svtgvvlymv tcrvdknysv
      181 nledlkkshk krhhlstlta sgfaryelfk stalddtvaa sqttitldis wspvdeilqt
      241 pplssaatln ikvesgeprg plsqlhrelk fllvladglr tgvtewpesl eaksavelvq
      301 eflnelnkln efgdstkkdt evvkndaaav dgsveclltv rgdldfaeql wckmsssvis
      361 yqdlvkcftl viqslqhgai qpwlhsgscs llsklihqsy hgtmdtvsls gtvpvqmlle
      421 igldklkkdy icffigqela slnhleyfis psvdtqeqvh rvqklhhile ivvscmlfik
      481 pqhellfslt qscikyyeqn pldeqhifql pvrptavkdl yqnekpqkwr veinsgqkkv
      541 ktiwqlsdsp pvdhlnfhrp dfseltlngs leerisftym vtcsqvhfk
//
LOCUS       XP_061013994             589 aa            linear   MAM 02-DEC-2023
DEFINITION  protein zwilch homolog isoform X2 [Dama dama].
ACCESSION   XP_061013994
VERSION     XP_061013994.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158011.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..589
                     /product="protein zwilch homolog isoform X2"
                     /calculated_mol_wt=66043
     Region          31..571
                     /region_name="Zwilch"
                     /note="RZZ complex, subunit zwilch; pfam09817"
                     /db_xref="CDD:401684"
     CDS             1..589
                     /gene="ZWILCH"
                     /coded_by="XM_061158011.1:103..1872"
                     /db_xref="GeneID:133066686"
ORIGIN      
        1 mwsganraae efyagllqef deekkgickg pfiyaadvqv qliskgqpnp lknilhenet
       61 mfivekvple keepshveel qseetaisdl stgenvglla lpvgrarqli gfytmahnpn
      121 mthlklnrpv aalpplwvrc dgsdpegisw lgaellstss svtgvvlymv tcrvdknysv
      181 nledlkkshk krhhlstlta sgfaryelfk stalddtvaa sqttitldis wspvdeilqt
      241 pplssaatln ikvesgeprg plsqlhrelk fllvladglr tgvtewpesl eaksavelvq
      301 eflnelnkln efgdstkkdt evvkndaaav dgsveclltv rgdldfaeql wckmsssvis
      361 yqdlvkcftl viqslqhgai qpwlhsgscs llsklihqsy hgtmdtvsls gtvpvqmlle
      421 igldklkkdy icffigqela slnhleyfis psvdtqeqvh rvqklhhile ivvscmlfik
      481 pqhellfslt qscikyyeqn pldeqhifql pvrptavkdl yqnekpqkwr veinsgqkkv
      541 ktiwqlsdsp pvdhlnfhrp dfseltlngs leerisftym vtcsqvhfk
//
LOCUS       XP_061013995             532 aa            linear   MAM 02-DEC-2023
DEFINITION  protein zwilch homolog isoform X3 [Dama dama].
ACCESSION   XP_061013995
VERSION     XP_061013995.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158012.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..532
                     /product="protein zwilch homolog isoform X3"
                     /calculated_mol_wt=59622
     Region          5..514
                     /region_name="Zwilch"
                     /note="RZZ complex, subunit zwilch; pfam09817"
                     /db_xref="CDD:401684"
     CDS             1..532
                     /gene="ZWILCH"
                     /coded_by="XM_061158012.1:181..1779"
                     /db_xref="GeneID:133066686"
ORIGIN      
        1 mfivekvple keepshveel qseetaisdl stgenvglla lpvgrarqli gfytmahnpn
       61 mthlklnrpv aalpplwvrc dgsdpegisw lgaellstss svtgvvlymv tcrvdknysv
      121 nledlkkshk krhhlstlta sgfaryelfk stalddtvaa sqttitldis wspvdeilqt
      181 pplssaatln ikvesgeprg plsqlhrelk fllvladglr tgvtewpesl eaksavelvq
      241 eflnelnkln efgdstkkdt evvkndaaav dgsveclltv rgdldfaeql wckmsssvis
      301 yqdlvkcftl viqslqhgai qpwlhsgscs llsklihqsy hgtmdtvsls gtvpvqmlle
      361 igldklkkdy icffigqela slnhleyfis psvdtqeqvh rvqklhhile ivvscmlfik
      421 pqhellfslt qscikyyeqn pldeqhifql pvrptavkdl yqnekpqkwr veinsgqkkv
      481 ktiwqlsdsp pvdhlnfhrp gkddfseltl ngsleerisf tymvtcsqvh fk
//
LOCUS       XP_061013996             532 aa            linear   MAM 02-DEC-2023
DEFINITION  protein zwilch homolog isoform X3 [Dama dama].
ACCESSION   XP_061013996
VERSION     XP_061013996.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158013.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..532
                     /product="protein zwilch homolog isoform X3"
                     /calculated_mol_wt=59622
     Region          5..514
                     /region_name="Zwilch"
                     /note="RZZ complex, subunit zwilch; pfam09817"
                     /db_xref="CDD:401684"
     CDS             1..532
                     /gene="ZWILCH"
                     /coded_by="XM_061158013.1:147..1745"
                     /db_xref="GeneID:133066686"
ORIGIN      
        1 mfivekvple keepshveel qseetaisdl stgenvglla lpvgrarqli gfytmahnpn
       61 mthlklnrpv aalpplwvrc dgsdpegisw lgaellstss svtgvvlymv tcrvdknysv
      121 nledlkkshk krhhlstlta sgfaryelfk stalddtvaa sqttitldis wspvdeilqt
      181 pplssaatln ikvesgeprg plsqlhrelk fllvladglr tgvtewpesl eaksavelvq
      241 eflnelnkln efgdstkkdt evvkndaaav dgsveclltv rgdldfaeql wckmsssvis
      301 yqdlvkcftl viqslqhgai qpwlhsgscs llsklihqsy hgtmdtvsls gtvpvqmlle
      361 igldklkkdy icffigqela slnhleyfis psvdtqeqvh rvqklhhile ivvscmlfik
      421 pqhellfslt qscikyyeqn pldeqhifql pvrptavkdl yqnekpqkwr veinsgqkkv
      481 ktiwqlsdsp pvdhlnfhrp gkddfseltl ngsleerisf tymvtcsqvh fk
//
LOCUS       XP_061013997             532 aa            linear   MAM 02-DEC-2023
DEFINITION  protein zwilch homolog isoform X3 [Dama dama].
ACCESSION   XP_061013997
VERSION     XP_061013997.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158014.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..532
                     /product="protein zwilch homolog isoform X3"
                     /calculated_mol_wt=59622
     Region          5..514
                     /region_name="Zwilch"
                     /note="RZZ complex, subunit zwilch; pfam09817"
                     /db_xref="CDD:401684"
     CDS             1..532
                     /gene="ZWILCH"
                     /coded_by="XM_061158014.1:190..1788"
                     /db_xref="GeneID:133066686"
ORIGIN      
        1 mfivekvple keepshveel qseetaisdl stgenvglla lpvgrarqli gfytmahnpn
       61 mthlklnrpv aalpplwvrc dgsdpegisw lgaellstss svtgvvlymv tcrvdknysv
      121 nledlkkshk krhhlstlta sgfaryelfk stalddtvaa sqttitldis wspvdeilqt
      181 pplssaatln ikvesgeprg plsqlhrelk fllvladglr tgvtewpesl eaksavelvq
      241 eflnelnkln efgdstkkdt evvkndaaav dgsveclltv rgdldfaeql wckmsssvis
      301 yqdlvkcftl viqslqhgai qpwlhsgscs llsklihqsy hgtmdtvsls gtvpvqmlle
      361 igldklkkdy icffigqela slnhleyfis psvdtqeqvh rvqklhhile ivvscmlfik
      421 pqhellfslt qscikyyeqn pldeqhifql pvrptavkdl yqnekpqkwr veinsgqkkv
      481 ktiwqlsdsp pvdhlnfhrp gkddfseltl ngsleerisf tymvtcsqvh fk
//
LOCUS       XP_061013998             579 aa            linear   MAM 02-DEC-2023
DEFINITION  lactase-like protein [Dama dama].
ACCESSION   XP_061013998
VERSION     XP_061013998.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158015.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..579
                     /product="lactase-like protein"
                     /calculated_mol_wt=65889
     Region          45..515
                     /region_name="Glycosyl hydrolases"
                     /note="A functionally diverse superfamily containing
                     glycosyl hydrolase families 1,5,10,17,44,72, and others;
                     cl23725"
                     /db_xref="CDD:474034"
     CDS             1..579
                     /gene="LCTL"
                     /coded_by="XM_061158015.1:555..2294"
                     /db_xref="GeneID:133066687"
ORIGIN      
        1 mcffrygggp gamkpvrvvt lcwvlllasr lgatrkespe easfyygnfp lgfswgvgss
       61 afqtegawdq hgkgpsiwdt fthsgkgnvl gdetadvacn syykvqedva llrelhvshy
      121 rfslswprll ptgvradgvn rkgiqfysdf idallksnit pivtlhhwdl pqllqakcgg
      181 wqnvsmanyf sdyanlcfea fgdrvkhwvt fsdprtmaek gyetghhapg lklqgtglyk
      241 aahhvikaha rvwhayndtw rrlqqglvgi slncdwgepv dlsnpkdiea aerylqfclg
      301 wfanpiyagd ypqvmkdhig rksaeqglem srlpvfslqe ksyikgtsdf lglghfttry
      361 iternypsgq gpsyqndrdl velvdpnwpd lgskwlhsvp wgfrrllnfa qtqygnpliy
      421 vtengasqkl hctqlcdewr iqylkgytne mlkaikdgan vkgytswsll dkfewergys
      481 drygfyyidf nkknrprypk asveyykrii tangfpnpre veswyfkale icsinnqmla
      541 aepllsymqi vteivvptvc tlciliaavl lmlllrsls
//
LOCUS       XP_061013999             422 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein uL4 [Dama dama].
ACCESSION   XP_061013999
VERSION     XP_061013999.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158016.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..422
                     /product="large ribosomal subunit protein uL4"
                     /calculated_mol_wt=47253
     Region          2..365
                     /region_name="PTZ00428"
                     /note="60S ribosomal protein L4; Provisional"
                     /db_xref="CDD:185611"
     Region          <327..>422
                     /region_name="tolA"
                     /note="cell envelope integrity inner membrane protein
                     TolA; Provisional; PRK09510"
                     /db_xref="CDD:236545"
     CDS             1..422
                     /gene="RPL4"
                     /coded_by="XM_061158016.1:100..1368"
                     /db_xref="GeneID:133066689"
ORIGIN      
        1 macarplisv ysekgessgk nvtlpavfka pirpdivnfv htnlrknnrq pyavselagh
       61 qtsaeswgtg ravariprvr gggthrsgqg afgnmcrggr mfaptktwrr whrrvnttqk
      121 ryaicsalaa salpalvmsk ghrieevpel plvvedkveg ykktkeavll lkklkawndi
      181 kkvyasqrmr agkgkmrnrr riqrrgpcii ynedngiika frnipgitll nvsklnilkl
      241 apgghvgrfc iwtesafrkl delygtwrka aslksnynlp mhkmlntdls rilkspeiqr
      301 alraprkkih rrvlkknplk nlrimlklnp yaktmrrnti lrqaknhkir mdkaaaalea
      361 ksdqkgvegk kpvvgnkqkk avgdkklkkp vvgkkaagtk kpaaekkpte kkptseekka
      421 aa
//
LOCUS       XP_061014000             393 aa            linear   MAM 02-DEC-2023
DEFINITION  dual specificity mitogen-activated protein kinase kinase 1 [Dama
            dama].
ACCESSION   XP_061014000
VERSION     XP_061014000.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158017.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..393
                     /product="dual specificity mitogen-activated protein
                     kinase kinase 1"
                     /calculated_mol_wt=43292
     Region          62..380
                     /region_name="PKc_MEK1"
                     /note="Catalytic domain of the dual-specificity Protein
                     Kinase, Mitogen-Activated Protein (MAP)/Extracellular
                     signal-Regulated Kinase (ERK) Kinase 1; cd06650"
                     /db_xref="CDD:270816"
     Site            order(74..78,82,95,97,127,143..146,149..150,153,190,
                     192..195,197,207..208,211,223..226,228,255,264)
                     /site_type="active"
                     /db_xref="CDD:270816"
     Site            order(74..78,80,82,95,97,127,143..146,149..150,152..153,
                     192,194..195,197,208)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270816"
     Site            order(77..78,190,192..194,211,223..226,228,255,264)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270816"
     Site            order(77..78,97,115,118,127,141,143,208..209,211..212,
                     215..216,219)
                     /site_type="other"
                     /note="noncompetitive inhibitor binding site [chemical
                     binding]"
                     /db_xref="CDD:270816"
     Site            order(81,101..102,137,230,234..237,311,314..315,318..319)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:270816"
     Site            207..228
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270816"
     Site            order(221..226,228,230,234..237,309..311,314..315,318)
                     /site_type="other"
                     /note="KSR interface [polypeptide binding]"
                     /db_xref="CDD:270816"
     CDS             1..393
                     /gene="MAP2K1"
                     /coded_by="XM_061158017.1:403..1584"
                     /db_xref="GeneID:133066690"
ORIGIN      
        1 mpkkkptpiq lnpapdgsav ngtssaetnl ealqkkleel eldeqqrkrl eafltqkqkv
       61 gelkdddfek iselgagngg vvfkvshkps glvmarklih leikpairnq iirelqvlhe
      121 cnspyivgfy gafysdgeis icmehmdggs ldqvlkkagr ipeqilgkvs iavikgltyl
      181 rekhkimhrd vkpsnilvns rgeiklcdfg vsgqlidsma nsfvgtrsym sperlqgthy
      241 svqsdiwsmg lslvemavgr ypipppdake lelmfgcqve gdaaetpprp rtpgrplssy
      301 gmdsrppmai felldyivne pppklpsgvf slefqdfvnk cliknpaera dlkqlmvhaf
      361 ikrsdaeevd fagwlcatig lnqpstptha agv
//
LOCUS       XP_061014001             100 aa            linear   MAM 02-DEC-2023
DEFINITION  snRNA-activating protein complex subunit 5 isoform X1 [Dama dama].
ACCESSION   XP_061014001
VERSION     XP_061014001.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158018.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..100
                     /product="snRNA-activating protein complex subunit 5
                     isoform X1"
                     /calculated_mol_wt=11377
     Region          1..84
                     /region_name="SNAPC5"
                     /note="snRNA-activating protein complex subunit 19, SNAPc
                     subunit 19; pfam15497"
                     /db_xref="CDD:464748"
     CDS             1..100
                     /gene="SNAPC5"
                     /coded_by="XM_061158018.1:67..369"
                     /db_xref="GeneID:133066691"
ORIGIN      
        1 mlsrlqelrk eeetllrlka alhdqlnrlk veelalqsmi ssrregemlp sqpapepshd
       61 qmlvlvdnea sinqtalels trshvpeeee eeeeeeesds
//
LOCUS       XP_061014002              99 aa            linear   MAM 02-DEC-2023
DEFINITION  snRNA-activating protein complex subunit 5 isoform X2 [Dama dama].
ACCESSION   XP_061014002
VERSION     XP_061014002.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158019.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..99
                     /product="snRNA-activating protein complex subunit 5
                     isoform X2"
                     /calculated_mol_wt=11248
     Region          1..83
                     /region_name="SNAPC5"
                     /note="snRNA-activating protein complex subunit 19, SNAPc
                     subunit 19; pfam15497"
                     /db_xref="CDD:464748"
     CDS             1..99
                     /gene="SNAPC5"
                     /coded_by="XM_061158019.1:67..366"
                     /db_xref="GeneID:133066691"
ORIGIN      
        1 mlsrlqelrk eeetllrlka alhdqlnrlk veelalqsmi ssrregemlp sqpapepshd
       61 mlvlvdneas inqtalelst rshvpeeeee eeeeeesds
//
LOCUS       XP_061014003             301 aa            linear   MAM 02-DEC-2023
DEFINITION  TIMELESS-interacting protein isoform X1 [Dama dama].
ACCESSION   XP_061014003
VERSION     XP_061014003.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158020.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..301
                     /product="TIMELESS-interacting protein isoform X1"
                     /calculated_mol_wt=34172
     Region          77..159
                     /region_name="Swi3"
                     /note="Replication Fork Protection Component Swi3;
                     pfam07962"
                     /db_xref="CDD:462324"
     CDS             1..301
                     /gene="TIPIN"
                     /coded_by="XM_061158020.1:1757..2662"
                     /db_xref="GeneID:133066692"
ORIGIN      
        1 msrkggkpee kmlepqengl idvpdyehie detfppfppp asperedgeg aepeeesgrg
       61 asvpvppkrt vkrnipklna erliserglp alrhmfekak fkgkgheaed lktlirhmeh
      121 wahrlfpklk fedfidrvey lgnkkevqtc lkrirldlpi lhedfvsnnd eveennghdv
      181 tateldpflt nsygsvefas essrslteeq qqriernkql alerrqakll snsqslgndl
      241 lvntpstqpp eegstgeeqk eeesnefnkd lldsphndga astineeeel kvektqldqs
      301 f
//
LOCUS       XP_061014004             290 aa            linear   MAM 02-DEC-2023
DEFINITION  TIMELESS-interacting protein isoform X2 [Dama dama].
ACCESSION   XP_061014004
VERSION     XP_061014004.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158021.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..290
                     /product="TIMELESS-interacting protein isoform X2"
                     /calculated_mol_wt=32943
     Region          66..148
                     /region_name="Swi3"
                     /note="Replication Fork Protection Component Swi3;
                     pfam07962"
                     /db_xref="CDD:462324"
     CDS             1..290
                     /gene="TIPIN"
                     /coded_by="XM_061158021.1:99..971"
                     /db_xref="GeneID:133066692"
ORIGIN      
        1 mlepqengli dvpdyehied etfppfpppa speredgega epeeesgrga svpvppkrtv
       61 krnipklnae rliserglpa lrhmfekakf kgkgheaedl ktlirhmehw ahrlfpklkf
      121 edfidrveyl gnkkevqtcl krirldlpil hedfvsnnde veennghdvt ateldpfltn
      181 sygsvefase ssrslteeqq qriernkqla lerrqaklls nsqslgndll vntpstqppe
      241 egstgeeqke eesnefnkdl ldsphndgaa stineeeelk vektqldqsf
//
LOCUS       XP_061014005            1058 aa            linear   MAM 02-DEC-2023
DEFINITION  DIS3-like exonuclease 1 isoform X1 [Dama dama].
ACCESSION   XP_061014005
VERSION     XP_061014005.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158022.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1058
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1058
                     /product="DIS3-like exonuclease 1 isoform X1"
                     /calculated_mol_wt=121233
     Region          11..186
                     /region_name="PIN_Rrp44-like"
                     /note="VapC-like PIN domain of yeast exosome subunit Rrp44
                     endoribonuclease and other eukaryotic homologs; cd09862"
                     /db_xref="CDD:350211"
     Site            order(22..26,28,30,88,93..94,100,104,118,121)
                     /site_type="other"
                     /note="exosome subunit interface [polypeptide binding]"
                     /db_xref="CDD:350211"
     Site            order(33,38,41,153)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:350211"
     Region          243..915
                     /region_name="VacB"
                     /note="Exoribonuclease R [Transcription]; COG0557"
                     /db_xref="CDD:440323"
     Region          886..963
                     /region_name="Rrp44_S1"
                     /note="S1 domain; pfam17215"
                     /db_xref="CDD:435792"
     CDS             1..1058
                     /gene="DIS3L"
                     /coded_by="XM_061158022.1:101..3277"
                     /db_xref="GeneID:133066693"
ORIGIN      
        1 mlqkrekvll lrtfhgrtlr ivrehylrps vpcnsplcpq patchndgkl lssdvthymv
       61 pdwkvvqdyl eilefpelkg ivfmqtacqa vqrqrgrrqy nklrnllkda rhdcvlfane
      121 fqqscylpre rgesmekwqs rsiynaaawy yhhcqhrmpi vmvtedeeai qqygsetegv
      181 fvisfkvfpa gnyldnfwpd lkaahelces ilqsrreren esqeshgkey pehvplevle
      241 agiksgryiq gtlnvnkhra qmeafvrlqg asskdsdlvs dilihgmkar nrsihgdvvv
      301 vellpksewk grtaalgesd gddrapgeap gepmptgrvv gilqknwrdy vvtfpsieev
      361 qsqgknaqki lvtpwdyrip kiristqqae alqdfrvvvr idswestsmy pnghfvrvlg
      421 rigdlegeia tilvensisv vpfseaqmce mpvntlenpw kvssqeerer kdlrkthlvf
      481 sidpsgcedv ddtlsvrald ngnlelgvhi advthfvaph syidieartr attyyladrr
      541 ydmlptilsa dvcsllggvd ryavsvmwel dktsyeikkv wygrtiirsa yklfyeaaqd
      601 lldgnfsivk dipefkdlee rnrqakleel vwairkltdi arhirakrdr cgalelegve
      661 vriqldekkn ihdlipkqpl evhetvaecm ilanhwvakk iwesfphqal lrrhppphqe
      721 ffselrecak akgffidtrs nkaladsldn andpndpivn kllrsmatqa msnalyfstg
      781 scaeeefhhy glaldkythf tspirrysdi ivhrllmaai skdkkmeike nlfsnkdlee
      841 lcrhinnrnr aaqhsqkqst elfqcmyfkd kdpeteerci sdgviysirt ngvlvfiprf
      901 gikgaaylrn kdglviscgp dghsewkpgs lqrfqnkits tttggesvtf hlfdhvtvri
      961 svqtsrchsd tirleiissk phmtpdtelf qqsslllksd lvkevtrsve eaqlaqevev
     1021 nitedyqkyc qtkgrslytl leeirdlall dvsnsygi
//
LOCUS       XP_061014006            1053 aa            linear   MAM 02-DEC-2023
DEFINITION  DIS3-like exonuclease 1 isoform X2 [Dama dama].
ACCESSION   XP_061014006
VERSION     XP_061014006.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158023.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1053
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1053
                     /product="DIS3-like exonuclease 1 isoform X2"
                     /calculated_mol_wt=120762
     Region          11..188
                     /region_name="PIN_Rrp44-like"
                     /note="VapC-like PIN domain of yeast exosome subunit Rrp44
                     endoribonuclease and other eukaryotic homologs; cd09862"
                     /db_xref="CDD:350211"
     Site            order(22..26,28,30,88,93..94,100,104,118,121)
                     /site_type="other"
                     /note="exosome subunit interface [polypeptide binding]"
                     /db_xref="CDD:350211"
     Site            order(33,38,41,153)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:350211"
     Region          238..910
                     /region_name="VacB"
                     /note="Exoribonuclease R [Transcription]; COG0557"
                     /db_xref="CDD:440323"
     Region          881..958
                     /region_name="Rrp44_S1"
                     /note="S1 domain; pfam17215"
                     /db_xref="CDD:435792"
     CDS             1..1053
                     /gene="DIS3L"
                     /coded_by="XM_061158023.1:100..3261"
                     /db_xref="GeneID:133066693"
ORIGIN      
        1 mlqkrekvll lrtfhgrtlr ivrehylrps vpcnsplcpq patchndgkl lssdvthymv
       61 pdwkvvqdyl eilefpelkg ivfmqtacqa vqrqrgrrqy nklrnllkda rhdcvlfane
      121 fqqscylpre rgesmekwqs rsiynaaawy yhhcqhrmpi vmvtedeeai qqygsetegv
      181 fvisfknyld nfwpdlkaah elcesilqsr rerenesqes hgkeypehvp levleagiks
      241 gryiqgtlnv nkhraqmeaf vrlqgasskd sdlvsdilih gmkarnrsih gdvvvvellp
      301 ksewkgrtaa lgesdgddra pgeapgepmp tgrvvgilqk nwrdyvvtfp sieevqsqgk
      361 naqkilvtpw dyripkiris tqqaealqdf rvvvridswe stsmypnghf vrvlgrigdl
      421 egeiatilve nsisvvpfse aqmcempvnt lenpwkvssq eererkdlrk thlvfsidps
      481 gcedvddtls vraldngnle lgvhiadvth fvaphsyidi eartrattyy ladrrydmlp
      541 tilsadvcsl lggvdryavs vmweldktsy eikkvwygrt iirsayklfy eaaqdlldgn
      601 fsivkdipef kdleernrqa kleelvwair kltdiarhir akrdrcgale legvevriql
      661 dekknihdli pkqplevhet vaecmilanh wvakkiwesf phqallrrhp pphqeffsel
      721 recakakgff idtrsnkala dsldnandpn dpivnkllrs matqamsnal yfstgscaee
      781 efhhyglald kythftspir rysdiivhrl lmaaiskdkk meikenlfsn kdleelcrhi
      841 nnrnraaqhs qkqstelfqc myfkdkdpet eercisdgvi ysirtngvlv fiprfgikga
      901 aylrnkdglv iscgpdghse wkpgslqrfq nkitstttgg esvtfhlfdh vtvrisvqts
      961 rchsdtirle iisskphmtp dtelfqqssl llksdlvkev trsveeaqla qevevnited
     1021 yqkycqtkgr slytlleeir dlalldvsns ygi
//
LOCUS       XP_061014007            1143 aa            linear   MAM 02-DEC-2023
DEFINITION  multiple epidermal growth factor-like domains protein 11 [Dama
            dama].
ACCESSION   XP_061014007
VERSION     XP_061014007.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158024.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1143
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1143
                     /product="multiple epidermal growth factor-like domains
                     protein 11"
                     /calculated_mol_wt=121522
     Region          25..94
                     /region_name="EMI"
                     /note="EMI domain; pfam07546"
                     /db_xref="CDD:462204"
     Region          275..320
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cl21504"
                     /db_xref="CDD:473889"
     Region          362..409
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cl21504"
                     /db_xref="CDD:473889"
     CDS             1..1143
                     /gene="MEGF11"
                     /coded_by="XM_061158024.1:56..3487"
                     /db_xref="GeneID:133066694"
ORIGIN      
        1 mmlsvagliv csllqivlsl npedpnvcsh wesyavtvqe syahpfdqiy ytrctdilnw
       61 fkctrhrisy ktayrrglrt myrrrsqccp gyyengdfci plcteecvhg rcvspdtchc
      121 epgwggpdcs sgcdsdhwgp hcsnrcqcqn galcnpitga cvcaagfrgw rceelcapgt
      181 hgkgcqlpcq crhgagcdpr tgeclcapgy tgvyceelcp pgshgahcel rcpcqnggtc
      241 hhitgecacp pgwtgavcaq pcppgtfgqn csqdcpchhg gqcdhvtgqc hctagymgdr
      301 cqeecplgtf gfqcsqrcdc hnggqcspss gacacepgyk gprcqerlcp eglhgpacsl
      361 pcpcdadntv schpvtgact cqpgwsgdhc nescpvgyyg dgcqlpctcq ngadchsitg
      421 sctcapgfmg evctvpcaag tygsncssvc scnnggtcsp vdgsctckeg wqgldcalpc
      481 psgawglncn escscangaa cspadgscsc tpgwlghtce lpcpdgtfgl ncsercdcsh
      541 adgcdpitgh ccclagwtgi hcdntcptgr wgpncsvscn cenggscspe dgscecapgf
      601 rgplcqrvca pgfyghgctq pcplcvhssg pchhvsgice clpgfsgalc nqvcagghfg
      661 qdcaqlcsca nngtcspidg scqcfpgwig kdcsqacppg fwgpacfhtc schhgascsa
      721 edgachctpg wtglfctqrc paafygkdcg rvcqcqngas cdhisgkctc rtgftgqhce
      781 qrcapgtfgy gcqqlcecmn natcdhvtgt cycssgfkgi rcdqaalmme elnpytkisp
      841 algaerhsvg avtgivllll livvllglfa wrrrrqkekg rdlaprvsyt pamrmtstdy
      901 slsdlsqsss haqcfsnssy halacggpat sqastldrss ptklsnksld rdmagwtpys
      961 yvnvldshfq isalearypp edfyielrhl srpaelhspg acgmdrrqnt yvmdkgfkdy
     1021 mkesvcssst cslnssenpy atikdppilt cklpessyve mkspvhrgsp ytdvpslsts
     1081 nkniyevept vsvvqegrgc nssyiqnpyd lprnshipgh ydllpvrqsp arvpsqdkqs
     1141 eeg
//
LOCUS       XP_061014008             216 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-related protein Rab-11A [Dama dama].
ACCESSION   XP_061014008
VERSION     XP_061014008.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158025.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..216
                     /product="ras-related protein Rab-11A"
                     /calculated_mol_wt=24262
     Region          9..173
                     /region_name="Rab11_like"
                     /note="Rab GTPase family 11 (Rab11)-like includes Rab11a,
                     Rab11b, and Rab25; cd01868"
                     /db_xref="CDD:206660"
     Site            9..13
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206660"
     Site            18..25
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206660"
     Site            order(20..26,37,40,43,69,124..125,127,154..156)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206660"
     Site            order(26..37,39..42)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206660"
     Site            order(36,41..49)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206660"
     Site            order(41,45..52,59,61)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206660"
     Site            43
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206660"
     Site            order(44,46..48,63,65,72..73,76,80,82..85,172)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206660"
     Site            order(44..45,47,65..66,73,75,77..79)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206660"
     Site            44..48
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206660"
     Site            61..65
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206660"
     Site            66..69
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206660"
     Site            order(69,71..81)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206660"
     Site            72..77
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206660"
     Site            80..84
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206660"
     Site            89..94
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206660"
     Site            117..121
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206660"
     Site            124..127
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206660"
     Site            154..156
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206660"
     Site            170..173
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206660"
     CDS             1..216
                     /gene="RAB11A"
                     /coded_by="XM_061158025.1:137..787"
                     /db_xref="GeneID:133066695"
ORIGIN      
        1 mgtrddeydy lfkvvligds gvgksnllsr ftrnefnles kstigvefat rsiqvdgkti
       61 kaqiwdtagq eryraitsay yrgavgallv ydiakhltye nverwlkelr dhadsnivim
      121 lvgnksdlrh lravptdear afaeknglsf ietsaldstn veaafqtilt eiyrivsqkq
      181 msdrrendms psnnvvpihv ppttenkpkv qccqni
//
LOCUS       XP_061014009            1913 aa            linear   MAM 02-DEC-2023
DEFINITION  C-myc promoter-binding protein isoform X1 [Dama dama].
ACCESSION   XP_061014009
VERSION     XP_061014009.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158026.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1913
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1913
                     /product="C-myc promoter-binding protein isoform X1"
                     /calculated_mol_wt=214087
     Region          194..276
                     /region_name="uDENN"
                     /note="Domain always found upstream of DENN domain, found
                     in a variety of signalling proteins; smart00800"
                     /db_xref="CDD:214824"
     Region          308..492
                     /region_name="DENN"
                     /note="DENN (AEX-3) domain; pfam02141"
                     /db_xref="CDD:460461"
     Region          559..632
                     /region_name="dDENN"
                     /note="Domain always found downstream of DENN domain,
                     found in a variety of signalling proteins; smart00801"
                     /db_xref="CDD:129037"
     Region          808..848
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          810..839
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..1913
                     /gene="DENND4A"
                     /coded_by="XM_061158026.1:284..6025"
                     /db_xref="GeneID:133066697"
ORIGIN      
        1 miedkgprva dyfvvagltd vskpleeeih fndachkvar pkepitdvsv iikslgeevp
       61 rdytciditp tglsadlnng slvgpqiflc yrrgrdkppl tdlgvlydwk erlkqgceii
      121 qstpygrpan isgstssqri yityrrasen mtqntlavtd iciiipskge spphtfckvd
      181 knlnnsmwgs avylcykksv aktntisyka glicrypqed yesfslpesv plfclpmgat
      241 iecwpsnsky plpvfstfvl tgasaekvyg aaiqfyepys edltekqrfl lglassanek
      301 sdssktihtn kcicllshwp ffdafrkflt flyrysisgp hvlpiekhis hfmhkvpfps
      361 pqrprilvql sphdnlilsq pvssplplsg gkfstllqnl gpenavtllv favtehkili
      421 hslrpsvlts vtealvsmif pfhwpcpyvp lcplaladvl sapcpfivgi dsryfdlydp
      481 ppdvscvdld tntisqtgdk knvawkilpk kpcknlmntl nnlhqqlakl qqrprddglm
      541 dlamndydfn sgkrlhmidl eiqeaflcfm asilkgyrsy lrpitqapse tatdatslfa
      601 lqaflrsrdr shqkfynmmt ktqmfirfie ecsfvsdkda slaffddcvd kvdmdksgev
      661 rlieldesfk sehtvfvtpp eiphlpngee pplqysyngf pvlrnslfer pegflqtrks
      721 klpsksssps spspmfrrtk qeiksahkia kryssipqmw srcllrhcyg lwficlpayv
      781 rvchskvral ktaydvlkkm qskkmdppde vcyrilmqlc gqydqpvlav rvlfemqkag
      841 idpnaitygy ynkavlestw psrsrsgyfl wtkvrnvvlg vaqfkralkk hvnlsqtals
      901 adgsdldavs hgsmdsghgt htveqapfnt glikvcasdd rsstggqsdl gynslskdev
      961 rrgdtstedi qeekdkkgsd ssslsecesa kgsadclpkl syqssssivr lsgasnsadk
     1021 isgestests epllissfed tnetgniqsr cfrkrhksdn epnlqqqmsw anrnrnlsgg
     1081 vlmglmlnrm nqeanpgdmv eklgadakil snviskrtrp nslnigkpsl rskrdsieke
     1141 ssdddipfdg sncladkvds pvifdledld netdsskarf ivpqnprrsq rlnssfsmkp
     1201 fektdvatgf dplsllvaet eqqqkeeeee eeddnksvst psarrdlaee iemymnnmss
     1261 pltsrtpsid lqracddkvt tkksptlvka crrsslppns prpvrltksk sysknedrpr
     1321 drlwsspafs ptcpfreesq dalthsspsf nldtllvpkl dvlrnsmfta gkgvaekask
     1381 wysrftmytt sskdqssdrt slssvgaqds estsltdedv chelegatsq dssatsgtkg
     1441 vdfsrasleg saslegslsk falpgkseva sscntsntni fqnyamevli sscsrcktcd
     1501 clvhdeeima gwtaddsnln ttcpfcgnlf lpflnieird lrrpgssfls hyryflkssp
     1561 stenihfpss fssqtrqsci ststsgldts llsvqgsfdl nskskplent carsiqipad
     1621 rskaamskcp ifpmarsvst ygtldkedig gqklvptgsl pttlqgaads lglewhlpsp
     1681 dpitvpylsp lvvwkelesl lenegdrait vadfvdhhpi vfwnlvwyfr rldlpsnlpg
     1741 lilssehcnk yskiprhcms edskyvliqm lwdnmklhqd pgqplyilwn ahtqkypmvh
     1801 llqkgdnsfn qellknmvks ikmndvygpm sqildtlnkc phfkrqrsly reilflslva
     1861 lgrenidida fdkeykmayd rltpsqvkst hncdrppstg vmecrktfge pyl
//
LOCUS       XP_061014010            1913 aa            linear   MAM 02-DEC-2023
DEFINITION  C-myc promoter-binding protein isoform X1 [Dama dama].
ACCESSION   XP_061014010
VERSION     XP_061014010.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158027.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1913
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1913
                     /product="C-myc promoter-binding protein isoform X1"
                     /calculated_mol_wt=214087
     Region          194..276
                     /region_name="uDENN"
                     /note="Domain always found upstream of DENN domain, found
                     in a variety of signalling proteins; smart00800"
                     /db_xref="CDD:214824"
     Region          308..492
                     /region_name="DENN"
                     /note="DENN (AEX-3) domain; pfam02141"
                     /db_xref="CDD:460461"
     Region          559..632
                     /region_name="dDENN"
                     /note="Domain always found downstream of DENN domain,
                     found in a variety of signalling proteins; smart00801"
                     /db_xref="CDD:129037"
     Region          808..848
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          810..839
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..1913
                     /gene="DENND4A"
                     /coded_by="XM_061158027.1:208..5949"
                     /db_xref="GeneID:133066697"
ORIGIN      
        1 miedkgprva dyfvvagltd vskpleeeih fndachkvar pkepitdvsv iikslgeevp
       61 rdytciditp tglsadlnng slvgpqiflc yrrgrdkppl tdlgvlydwk erlkqgceii
      121 qstpygrpan isgstssqri yityrrasen mtqntlavtd iciiipskge spphtfckvd
      181 knlnnsmwgs avylcykksv aktntisyka glicrypqed yesfslpesv plfclpmgat
      241 iecwpsnsky plpvfstfvl tgasaekvyg aaiqfyepys edltekqrfl lglassanek
      301 sdssktihtn kcicllshwp ffdafrkflt flyrysisgp hvlpiekhis hfmhkvpfps
      361 pqrprilvql sphdnlilsq pvssplplsg gkfstllqnl gpenavtllv favtehkili
      421 hslrpsvlts vtealvsmif pfhwpcpyvp lcplaladvl sapcpfivgi dsryfdlydp
      481 ppdvscvdld tntisqtgdk knvawkilpk kpcknlmntl nnlhqqlakl qqrprddglm
      541 dlamndydfn sgkrlhmidl eiqeaflcfm asilkgyrsy lrpitqapse tatdatslfa
      601 lqaflrsrdr shqkfynmmt ktqmfirfie ecsfvsdkda slaffddcvd kvdmdksgev
      661 rlieldesfk sehtvfvtpp eiphlpngee pplqysyngf pvlrnslfer pegflqtrks
      721 klpsksssps spspmfrrtk qeiksahkia kryssipqmw srcllrhcyg lwficlpayv
      781 rvchskvral ktaydvlkkm qskkmdppde vcyrilmqlc gqydqpvlav rvlfemqkag
      841 idpnaitygy ynkavlestw psrsrsgyfl wtkvrnvvlg vaqfkralkk hvnlsqtals
      901 adgsdldavs hgsmdsghgt htveqapfnt glikvcasdd rsstggqsdl gynslskdev
      961 rrgdtstedi qeekdkkgsd ssslsecesa kgsadclpkl syqssssivr lsgasnsadk
     1021 isgestests epllissfed tnetgniqsr cfrkrhksdn epnlqqqmsw anrnrnlsgg
     1081 vlmglmlnrm nqeanpgdmv eklgadakil snviskrtrp nslnigkpsl rskrdsieke
     1141 ssdddipfdg sncladkvds pvifdledld netdsskarf ivpqnprrsq rlnssfsmkp
     1201 fektdvatgf dplsllvaet eqqqkeeeee eeddnksvst psarrdlaee iemymnnmss
     1261 pltsrtpsid lqracddkvt tkksptlvka crrsslppns prpvrltksk sysknedrpr
     1321 drlwsspafs ptcpfreesq dalthsspsf nldtllvpkl dvlrnsmfta gkgvaekask
     1381 wysrftmytt sskdqssdrt slssvgaqds estsltdedv chelegatsq dssatsgtkg
     1441 vdfsrasleg saslegslsk falpgkseva sscntsntni fqnyamevli sscsrcktcd
     1501 clvhdeeima gwtaddsnln ttcpfcgnlf lpflnieird lrrpgssfls hyryflkssp
     1561 stenihfpss fssqtrqsci ststsgldts llsvqgsfdl nskskplent carsiqipad
     1621 rskaamskcp ifpmarsvst ygtldkedig gqklvptgsl pttlqgaads lglewhlpsp
     1681 dpitvpylsp lvvwkelesl lenegdrait vadfvdhhpi vfwnlvwyfr rldlpsnlpg
     1741 lilssehcnk yskiprhcms edskyvliqm lwdnmklhqd pgqplyilwn ahtqkypmvh
     1801 llqkgdnsfn qellknmvks ikmndvygpm sqildtlnkc phfkrqrsly reilflslva
     1861 lgrenidida fdkeykmayd rltpsqvkst hncdrppstg vmecrktfge pyl
//
LOCUS       XP_061014011            1912 aa            linear   MAM 02-DEC-2023
DEFINITION  C-myc promoter-binding protein isoform X2 [Dama dama].
ACCESSION   XP_061014011
VERSION     XP_061014011.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158028.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1912
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1912
                     /product="C-myc promoter-binding protein isoform X2"
                     /calculated_mol_wt=214016
     Region          194..276
                     /region_name="uDENN"
                     /note="Domain always found upstream of DENN domain, found
                     in a variety of signalling proteins; smart00800"
                     /db_xref="CDD:214824"
     Region          308..492
                     /region_name="DENN"
                     /note="DENN (AEX-3) domain; pfam02141"
                     /db_xref="CDD:460461"
     Region          559..632
                     /region_name="dDENN"
                     /note="Domain always found downstream of DENN domain,
                     found in a variety of signalling proteins; smart00801"
                     /db_xref="CDD:129037"
     Region          808..848
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          810..839
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..1912
                     /gene="DENND4A"
                     /coded_by="XM_061158028.1:284..6022"
                     /db_xref="GeneID:133066697"
ORIGIN      
        1 miedkgprva dyfvvagltd vskpleeeih fndachkvar pkepitdvsv iikslgeevp
       61 rdytciditp tglsadlnng slvgpqiflc yrrgrdkppl tdlgvlydwk erlkqgceii
      121 qstpygrpan isgstssqri yityrrasen mtqntlavtd iciiipskge spphtfckvd
      181 knlnnsmwgs avylcykksv aktntisyka glicrypqed yesfslpesv plfclpmgat
      241 iecwpsnsky plpvfstfvl tgasaekvyg aaiqfyepys edltekqrfl lglassanek
      301 sdssktihtn kcicllshwp ffdafrkflt flyrysisgp hvlpiekhis hfmhkvpfps
      361 pqrprilvql sphdnlilsq pvssplplsg gkfstllqnl gpenavtllv favtehkili
      421 hslrpsvlts vtealvsmif pfhwpcpyvp lcplaladvl sapcpfivgi dsryfdlydp
      481 ppdvscvdld tntisqtgdk knvawkilpk kpcknlmntl nnlhqqlakl qqrprddglm
      541 dlamndydfn sgkrlhmidl eiqeaflcfm asilkgyrsy lrpitqapse tatdatslfa
      601 lqaflrsrdr shqkfynmmt ktqmfirfie ecsfvsdkda slaffddcvd kvdmdksgev
      661 rlieldesfk sehtvfvtpp eiphlpngee pplqysyngf pvlrnslfer pegflqtrks
      721 klpsksssps spspmfrrtk qeiksahkia kryssipqmw srcllrhcyg lwficlpayv
      781 rvchskvral ktaydvlkkm qskkmdppde vcyrilmqlc gqydqpvlav rvlfemqkag
      841 idpnaitygy ynkavlestw psrsrsgyfl wtkvrnvvlg vaqfkralkk hvnlsqtals
      901 dgsdldavsh gsmdsghgth tveqapfntg likvcasddr sstggqsdlg ynslskdevr
      961 rgdtstediq eekdkkgsds sslsecesak gsadclpkls yqssssivrl sgasnsadki
     1021 sgestestse pllissfedt netgniqsrc frkrhksdne pnlqqqmswa nrnrnlsggv
     1081 lmglmlnrmn qeanpgdmve klgadakils nviskrtrpn slnigkpslr skrdsiekes
     1141 sdddipfdgs ncladkvdsp vifdledldn etdsskarfi vpqnprrsqr lnssfsmkpf
     1201 ektdvatgfd plsllvaete qqqkeeeeee eddnksvstp sarrdlaeei emymnnmssp
     1261 ltsrtpsidl qracddkvtt kksptlvkac rrsslppnsp rpvrltksks ysknedrprd
     1321 rlwsspafsp tcpfreesqd althsspsfn ldtllvpkld vlrnsmftag kgvaekaskw
     1381 ysrftmytts skdqssdrts lssvgaqdse stsltdedvc helegatsqd ssatsgtkgv
     1441 dfsraslegs aslegslskf alpgksevas scntsntnif qnyamevlis scsrcktcdc
     1501 lvhdeeimag wtaddsnlnt tcpfcgnlfl pflnieirdl rrpgssflsh yryflkssps
     1561 tenihfpssf ssqtrqscis tstsgldtsl lsvqgsfdln skskplentc arsiqipadr
     1621 skaamskcpi fpmarsvsty gtldkedigg qklvptgslp ttlqgaadsl glewhlpspd
     1681 pitvpylspl vvwkelesll enegdraitv adfvdhhpiv fwnlvwyfrr ldlpsnlpgl
     1741 ilssehcnky skiprhcmse dskyvliqml wdnmklhqdp gqplyilwna htqkypmvhl
     1801 lqkgdnsfnq ellknmvksi kmndvygpms qildtlnkcp hfkrqrslyr eilflslval
     1861 grenididaf dkeykmaydr ltpsqvksth ncdrppstgv mecrktfgep yl
//
LOCUS       XP_061014013            1906 aa            linear   MAM 02-DEC-2023
DEFINITION  C-myc promoter-binding protein isoform X3 [Dama dama].
ACCESSION   XP_061014013
VERSION     XP_061014013.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158030.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1906
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1906
                     /product="C-myc promoter-binding protein isoform X3"
                     /calculated_mol_wt=213265
     Region          194..276
                     /region_name="uDENN"
                     /note="Domain always found upstream of DENN domain, found
                     in a variety of signalling proteins; smart00800"
                     /db_xref="CDD:214824"
     Region          308..492
                     /region_name="DENN"
                     /note="DENN (AEX-3) domain; pfam02141"
                     /db_xref="CDD:460461"
     Region          559..632
                     /region_name="dDENN"
                     /note="Domain always found downstream of DENN domain,
                     found in a variety of signalling proteins; smart00801"
                     /db_xref="CDD:129037"
     Region          808..848
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          810..839
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..1906
                     /gene="DENND4A"
                     /coded_by="XM_061158030.1:283..6003"
                     /db_xref="GeneID:133066697"
ORIGIN      
        1 miedkgprva dyfvvagltd vskpleeeih fndachkvar pkepitdvsv iikslgeevp
       61 rdytciditp tglsadlnng slvgpqiflc yrrgrdkppl tdlgvlydwk erlkqgceii
      121 qstpygrpan isgstssqri yityrrasen mtqntlavtd iciiipskge spphtfckvd
      181 knlnnsmwgs avylcykksv aktntisyka glicrypqed yesfslpesv plfclpmgat
      241 iecwpsnsky plpvfstfvl tgasaekvyg aaiqfyepys edltekqrfl lglassanek
      301 sdssktihtn kcicllshwp ffdafrkflt flyrysisgp hvlpiekhis hfmhkvpfps
      361 pqrprilvql sphdnlilsq pvssplplsg gkfstllqnl gpenavtllv favtehkili
      421 hslrpsvlts vtealvsmif pfhwpcpyvp lcplaladvl sapcpfivgi dsryfdlydp
      481 ppdvscvdld tntisqtgdk knvawkilpk kpcknlmntl nnlhqqlakl qqrprddglm
      541 dlamndydfn sgkrlhmidl eiqeaflcfm asilkgyrsy lrpitqapse tatdatslfa
      601 lqaflrsrdr shqkfynmmt ktqmfirfie ecsfvsdkda slaffddcvd kvdmdksgev
      661 rlieldesfk sehtvfvtpp eiphlpngee pplqysyngf pvlrnslfer pegflqtrks
      721 klpsksssps spspmfrrtk qeiksahkia kryssipqmw srcllrhcyg lwficlpayv
      781 rvchskvral ktaydvlkkm qskkmdppde vcyrilmqlc gqydqpvlav rvlfemqkag
      841 idpnaitygy ynkavlestw psrsrsgyfl wtkvrnvvlg vaqfkralkk hvnlsqtals
      901 adgsdldavs hgsmdsghgt htveqapfnt glikvcasdd rsstggqsdl gynslskdev
      961 rrgdtstedi qeekdkkgsd ssslsecesa kgsadclpkl syqssssivr lsgasnsadk
     1021 isgestests epllissfed tnetgniqsr cfrkrhksdn epnlqqqmsw anrnrnlsgg
     1081 vlmglmlnrm nqeanpgdmv eklgadakil snviskrtrp nslnigkpsl rskrdsieke
     1141 ssdddipfdg sncladkvds pvifdledld netdsskarf ivpqnprrsq rlnssfsmkp
     1201 fektdvatgf dplsllvaet eqqqkeeeee eeddnksvst psarrdlaee iemymnnmss
     1261 pltsrtpsid lqracddkvt tkksptlvka crrsslppns prpvrltksk sysknedrpr
     1321 drlwsspafs ptcpfreesq dalthsspsf nldtllvpkl dvlrnsmfta gkgvaekask
     1381 wysrftmytt sskdqssdrt slssvgaqds estsltdedv chelegatsq dssatsgtkg
     1441 vdfsrasleg saslegslsk falpgkseva sscntsntni fqnyamevli sscsrcktcd
     1501 clvhdeeima gwtaddsnln ttcpfcgnlf lpflnieird lrrpgryflk sspstenihf
     1561 pssfssqtrq sciststsgl dtsllsvqgs fdlnskskpl entcarsiqi padrskaams
     1621 kcpifpmars vstygtldke diggqklvpt gslpttlqga adslglewhl pspdpitvpy
     1681 lsplvvwkel esllenegdr aitvadfvdh hpivfwnlvw yfrrldlpsn lpglilsseh
     1741 cnkyskiprh cmsedskyvl iqmlwdnmkl hqdpgqplyi lwnahtqkyp mvhllqkgdn
     1801 sfnqellknm vksikmndvy gpmsqildtl nkcphfkrqr slyreilfls lvalgrenid
     1861 idafdkeykm aydrltpsqv ksthncdrpp stgvmecrkt fgepyl
//
LOCUS       XP_061014014            1905 aa            linear   MAM 02-DEC-2023
DEFINITION  C-myc promoter-binding protein isoform X4 [Dama dama].
ACCESSION   XP_061014014
VERSION     XP_061014014.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158031.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1905
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1905
                     /product="C-myc promoter-binding protein isoform X4"
                     /calculated_mol_wt=213194
     Region          194..276
                     /region_name="uDENN"
                     /note="Domain always found upstream of DENN domain, found
                     in a variety of signalling proteins; smart00800"
                     /db_xref="CDD:214824"
     Region          308..492
                     /region_name="DENN"
                     /note="DENN (AEX-3) domain; pfam02141"
                     /db_xref="CDD:460461"
     Region          559..632
                     /region_name="dDENN"
                     /note="Domain always found downstream of DENN domain,
                     found in a variety of signalling proteins; smart00801"
                     /db_xref="CDD:129037"
     Region          808..848
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          810..839
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..1905
                     /gene="DENND4A"
                     /coded_by="XM_061158031.1:282..5999"
                     /db_xref="GeneID:133066697"
ORIGIN      
        1 miedkgprva dyfvvagltd vskpleeeih fndachkvar pkepitdvsv iikslgeevp
       61 rdytciditp tglsadlnng slvgpqiflc yrrgrdkppl tdlgvlydwk erlkqgceii
      121 qstpygrpan isgstssqri yityrrasen mtqntlavtd iciiipskge spphtfckvd
      181 knlnnsmwgs avylcykksv aktntisyka glicrypqed yesfslpesv plfclpmgat
      241 iecwpsnsky plpvfstfvl tgasaekvyg aaiqfyepys edltekqrfl lglassanek
      301 sdssktihtn kcicllshwp ffdafrkflt flyrysisgp hvlpiekhis hfmhkvpfps
      361 pqrprilvql sphdnlilsq pvssplplsg gkfstllqnl gpenavtllv favtehkili
      421 hslrpsvlts vtealvsmif pfhwpcpyvp lcplaladvl sapcpfivgi dsryfdlydp
      481 ppdvscvdld tntisqtgdk knvawkilpk kpcknlmntl nnlhqqlakl qqrprddglm
      541 dlamndydfn sgkrlhmidl eiqeaflcfm asilkgyrsy lrpitqapse tatdatslfa
      601 lqaflrsrdr shqkfynmmt ktqmfirfie ecsfvsdkda slaffddcvd kvdmdksgev
      661 rlieldesfk sehtvfvtpp eiphlpngee pplqysyngf pvlrnslfer pegflqtrks
      721 klpsksssps spspmfrrtk qeiksahkia kryssipqmw srcllrhcyg lwficlpayv
      781 rvchskvral ktaydvlkkm qskkmdppde vcyrilmqlc gqydqpvlav rvlfemqkag
      841 idpnaitygy ynkavlestw psrsrsgyfl wtkvrnvvlg vaqfkralkk hvnlsqtals
      901 dgsdldavsh gsmdsghgth tveqapfntg likvcasddr sstggqsdlg ynslskdevr
      961 rgdtstediq eekdkkgsds sslsecesak gsadclpkls yqssssivrl sgasnsadki
     1021 sgestestse pllissfedt netgniqsrc frkrhksdne pnlqqqmswa nrnrnlsggv
     1081 lmglmlnrmn qeanpgdmve klgadakils nviskrtrpn slnigkpslr skrdsiekes
     1141 sdddipfdgs ncladkvdsp vifdledldn etdsskarfi vpqnprrsqr lnssfsmkpf
     1201 ektdvatgfd plsllvaete qqqkeeeeee eddnksvstp sarrdlaeei emymnnmssp
     1261 ltsrtpsidl qracddkvtt kksptlvkac rrsslppnsp rpvrltksks ysknedrprd
     1321 rlwsspafsp tcpfreesqd althsspsfn ldtllvpkld vlrnsmftag kgvaekaskw
     1381 ysrftmytts skdqssdrts lssvgaqdse stsltdedvc helegatsqd ssatsgtkgv
     1441 dfsraslegs aslegslskf alpgksevas scntsntnif qnyamevlis scsrcktcdc
     1501 lvhdeeimag wtaddsnlnt tcpfcgnlfl pflnieirdl rrpgryflks spstenihfp
     1561 ssfssqtrqs ciststsgld tsllsvqgsf dlnskskple ntcarsiqip adrskaamsk
     1621 cpifpmarsv stygtldked iggqklvptg slpttlqgaa dslglewhlp spdpitvpyl
     1681 splvvwkele sllenegdra itvadfvdhh pivfwnlvwy frrldlpsnl pglilssehc
     1741 nkyskiprhc msedskyvli qmlwdnmklh qdpgqplyil wnahtqkypm vhllqkgdns
     1801 fnqellknmv ksikmndvyg pmsqildtln kcphfkrqrs lyreilflsl valgrenidi
     1861 dafdkeykma ydrltpsqvk sthncdrpps tgvmecrktf gepyl
//
LOCUS       XP_061014015            1167 aa            linear   MAM 02-DEC-2023
DEFINITION  sodium/potassium/calcium exchanger 1 [Dama dama].
ACCESSION   XP_061014015
VERSION     XP_061014015.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158032.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1167
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1167
                     /product="sodium/potassium/calcium exchanger 1"
                     /calculated_mol_wt=126840
     Region          1..1167
                     /region_name="2A1904"
                     /note="K+-dependent Na+/Ca+ exchanger; TIGR00927"
                     /db_xref="CDD:273344"
     CDS             1..1167
                     /gene="SLC24A1"
                     /coded_by="XM_061158032.1:551..4054"
                     /db_xref="GeneID:133066698"
ORIGIN      
        1 mgklirmgaq errslwpkrl hwsrplfllg mliigstyqy ltsqqglptl waavssqhpv
       61 kvasrdlsnk emmmvssets kssselevea wapeatagrd gttpgvamkn tpsiprrtas
      121 itptipknny spaptgtgkv kedtsatprg vlnhytqsrp mvnnytpatp rgevkssrpt
      181 qsrgkvekys psplgrmvns yapsilmtmp rshgitartt mkdseimatk kmletnppkr
      241 lvekttpgpl kgitdntptf llsdletdtl isprnvvekk ilptpkrvds nssvnhqgmv
      301 gknplttprg tvlertsavs egqvtvstvt rgspaearas taawnvrnpl sgtsaptiri
      361 ssttfrgllk npskapstpa tprvrpnpti qvrhclvvep apvaptapsp srttavipqt
      421 pgpsvlpsgr pdlhpkaeyp rdlfsveerr qgwvvlhifg mmyvfvalai vcdeyfvpal
      481 gvitdklqis edvagatfma aggsapelft sligvfishs nvgigtivgs avfnilfvig
      541 tcalfsreil nltwwplfrd itfyifdlmm lilffldsli awwesvllll ayafyvftmk
      601 wnkqlelwvk eqlnkrpvak vmalgdlskl gdgtvvvdeq qdnkklklss vltrgsssas
      661 lhnstirsti yqlmlhsldp lgearpskdk eevtliqeak atpqakaesr peeeepaklp
      721 avtvtpapap dvkgdqeedp gsqgvgaeae stgertgdev eapaegenge psggdapleg
      781 esegkgengc egdilaerkg ddesegeiqa gedgevrgde geiqagedge vkgdedegei
      841 qagedgevkg dedegeiqag edgevkgded egeiqagedg evkgdeskge iqageggege
      901 teeqelnaei qgeakddeeg vdgegegdgg dnedeeeede geedeeeede eeeeeeeeee
      961 neqplslewp etrrkqaiyl fllpivfplw ltvpdvrrle akkffvitfl gsilwiamfs
     1021 ylmvwwahqv getigiseei mgltilaagt sipdlitsvi varkglgdma vsssvgsnif
     1081 ditvglplpw mlfslinglq pvavssnglf caivllflml lfvissialc kwrmnkilgf
     1141 tmfllyfvfl iisvmledri iscpvsv
//
LOCUS       XP_061014016             518 aa            linear   MAM 02-DEC-2023
DEFINITION  integrator complex subunit 14 [Dama dama].
ACCESSION   XP_061014016
VERSION     XP_061014016.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158033.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..518
                     /product="integrator complex subunit 14"
                     /calculated_mol_wt=57275
     Region          3..114
                     /region_name="VWA_2"
                     /note="von Willebrand factor type A domain; pfam13519"
                     /db_xref="CDD:463909"
     Region          209..356
                     /region_name="IntS14_b-barrel"
                     /note="Integrator complex subunit 14, beta-barrel domain;
                     pfam19435"
                     /db_xref="CDD:466081"
     Region          405..512
                     /region_name="IntS14_C"
                     /note="Integrator complex subunit 14, alpha-helical
                     domain; pfam20504"
                     /db_xref="CDD:466653"
     CDS             1..518
                     /gene="INTS14"
                     /coded_by="XM_061158033.1:377..1933"
                     /db_xref="GeneID:133066699"
ORIGIN      
        1 mptvvvmdvs lsmtrpvsve gseeyqrkhl aahgltmlfe hmatnyklef talvvfsslw
       61 elmvpftrdy ntlqealsnm ddydktcles alvgvcnivq qewggaipcq vvlvtdgclg
      121 igrgslrhsl athnqrsesn rfplpfpfps klyimcmanl eelqstdsld clerlidlnn
      181 gegqiftidg plclknvqsm fgklidlayt pfhavlkcgh ltadvqvfpr pepfvideei
      241 dpipkvintd leivgfidia dissppvlsr hlvlpialnk egdevgtgit ddnedensan
      301 qiagkipnfc vllhgslkve gmvaivqlgp ewhgmlysqa dskkksnlmm slfepgpepl
      361 pwlgkmvqlg pisdakenpy geddnkspfp lqpknkrsya qnvtvwikps glqtdvqkil
      421 rnarklpekt qtfykelnrl rkaalafgfl dllkgvadml erectllpdt ahpdaafqlt
      481 haaqqlklas agtseyagyd hnitplqtdf sgssaeri
//
LOCUS       XP_061014017             518 aa            linear   MAM 02-DEC-2023
DEFINITION  integrator complex subunit 14 [Dama dama].
ACCESSION   XP_061014017
VERSION     XP_061014017.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158034.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..518
                     /product="integrator complex subunit 14"
                     /calculated_mol_wt=57275
     Region          3..114
                     /region_name="VWA_2"
                     /note="von Willebrand factor type A domain; pfam13519"
                     /db_xref="CDD:463909"
     Region          209..356
                     /region_name="IntS14_b-barrel"
                     /note="Integrator complex subunit 14, beta-barrel domain;
                     pfam19435"
                     /db_xref="CDD:466081"
     Region          405..512
                     /region_name="IntS14_C"
                     /note="Integrator complex subunit 14, alpha-helical
                     domain; pfam20504"
                     /db_xref="CDD:466653"
     CDS             1..518
                     /gene="INTS14"
                     /coded_by="XM_061158034.1:244..1800"
                     /db_xref="GeneID:133066699"
ORIGIN      
        1 mptvvvmdvs lsmtrpvsve gseeyqrkhl aahgltmlfe hmatnyklef talvvfsslw
       61 elmvpftrdy ntlqealsnm ddydktcles alvgvcnivq qewggaipcq vvlvtdgclg
      121 igrgslrhsl athnqrsesn rfplpfpfps klyimcmanl eelqstdsld clerlidlnn
      181 gegqiftidg plclknvqsm fgklidlayt pfhavlkcgh ltadvqvfpr pepfvideei
      241 dpipkvintd leivgfidia dissppvlsr hlvlpialnk egdevgtgit ddnedensan
      301 qiagkipnfc vllhgslkve gmvaivqlgp ewhgmlysqa dskkksnlmm slfepgpepl
      361 pwlgkmvqlg pisdakenpy geddnkspfp lqpknkrsya qnvtvwikps glqtdvqkil
      421 rnarklpekt qtfykelnrl rkaalafgfl dllkgvadml erectllpdt ahpdaafqlt
      481 haaqqlklas agtseyagyd hnitplqtdf sgssaeri
//
LOCUS       XP_061014018             898 aa            linear   MAM 02-DEC-2023
DEFINITION  dipeptidyl peptidase 8 isoform X1 [Dama dama].
ACCESSION   XP_061014018
VERSION     XP_061014018.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158035.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..898
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..898
                     /product="dipeptidyl peptidase 8 isoform X1"
                     /calculated_mol_wt=103141
     Region          8..162
                     /region_name="Dpp_8_9_N"
                     /note="Dipeptidyl peptidase 8 and 9 N-terminal; pfam19520"
                     /db_xref="CDD:466112"
     Region          175..595
                     /region_name="DPPIV_N"
                     /note="Dipeptidyl peptidase IV (DPP IV) N-terminal region;
                     pfam00930"
                     /db_xref="CDD:395744"
     Region          687..891
                     /region_name="Peptidase_S9"
                     /note="Prolyl oligopeptidase family; pfam00326"
                     /db_xref="CDD:459761"
     CDS             1..898
                     /gene="DPP8"
                     /coded_by="XM_061158035.1:415..3111"
                     /db_xref="GeneID:133066700"
ORIGIN      
        1 mwkrseqmki qsgkcnmaaa meteqlgvei fetaeceeni esqdrpklep fyveryswsq
       61 lkklladtrk yhgymmakap hdfmfvkrnd pdgphsdriy ylamsgenre ntlfyseipk
      121 tinraavlml swkplldlfq atldygmysr eeellrerkr igtvgiasyd yhqgsgtflf
      181 qagsgiyhvk dggpqgftqq plrpnlvets cpnirmdpkl cpadpdwiaf ihsndiwisn
      241 ivtreerrlt yvhnelanme edprsagvat fvlqeefdry sgywwcpeae ttpsgskilr
      301 ilyeendese veiihvtspm letrradsfr ypktgtanpk vtfkmseili daegriidvi
      361 dkeliqpfei lfegveyiar agwtpegkya wailldrsqt rlqivlispe lfipveddam
      421 erqrfiesvp dsvtpliiye ettdiwinih difhvfpqsh edeiefifas ecktgfrhly
      481 kitsilkesk ykrssgglpa psdfkcpike eiaitsgewe vlgrhgsniq vdevrklvyf
      541 egtkdspleh hlyvvsyvnp gevtrltdrg yshsccisrh cdffiskysn qknphcvsly
      601 klaspdgdpt cktkefwati ldsagplpdy tppeifsfes ttgftlygml ykphdlqpgk
      661 kyptvlfiyg gpqvqlvnnr fkgvkyfrln tlaslgyvvv vidnrgschr glkfegafky
      721 kmgqieiddq veglqylasq ydfidldrvg ihgwsyggyl slmalmqrsd ifrvaiagap
      781 vtlwifydtg yterymghpd qneqgyylgs vamqaekfps epnrllllhg fldenvhfah
      841 tsillsflvr agkpydlqiy pqerhsirvp esgehyelhl lhylqenlgs riaalkvi
//
LOCUS       XP_061014019             898 aa            linear   MAM 02-DEC-2023
DEFINITION  dipeptidyl peptidase 8 isoform X1 [Dama dama].
ACCESSION   XP_061014019
VERSION     XP_061014019.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158036.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..898
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..898
                     /product="dipeptidyl peptidase 8 isoform X1"
                     /calculated_mol_wt=103141
     Region          8..162
                     /region_name="Dpp_8_9_N"
                     /note="Dipeptidyl peptidase 8 and 9 N-terminal; pfam19520"
                     /db_xref="CDD:466112"
     Region          175..595
                     /region_name="DPPIV_N"
                     /note="Dipeptidyl peptidase IV (DPP IV) N-terminal region;
                     pfam00930"
                     /db_xref="CDD:395744"
     Region          687..891
                     /region_name="Peptidase_S9"
                     /note="Prolyl oligopeptidase family; pfam00326"
                     /db_xref="CDD:459761"
     CDS             1..898
                     /gene="DPP8"
                     /coded_by="XM_061158036.1:311..3007"
                     /db_xref="GeneID:133066700"
ORIGIN      
        1 mwkrseqmki qsgkcnmaaa meteqlgvei fetaeceeni esqdrpklep fyveryswsq
       61 lkklladtrk yhgymmakap hdfmfvkrnd pdgphsdriy ylamsgenre ntlfyseipk
      121 tinraavlml swkplldlfq atldygmysr eeellrerkr igtvgiasyd yhqgsgtflf
      181 qagsgiyhvk dggpqgftqq plrpnlvets cpnirmdpkl cpadpdwiaf ihsndiwisn
      241 ivtreerrlt yvhnelanme edprsagvat fvlqeefdry sgywwcpeae ttpsgskilr
      301 ilyeendese veiihvtspm letrradsfr ypktgtanpk vtfkmseili daegriidvi
      361 dkeliqpfei lfegveyiar agwtpegkya wailldrsqt rlqivlispe lfipveddam
      421 erqrfiesvp dsvtpliiye ettdiwinih difhvfpqsh edeiefifas ecktgfrhly
      481 kitsilkesk ykrssgglpa psdfkcpike eiaitsgewe vlgrhgsniq vdevrklvyf
      541 egtkdspleh hlyvvsyvnp gevtrltdrg yshsccisrh cdffiskysn qknphcvsly
      601 klaspdgdpt cktkefwati ldsagplpdy tppeifsfes ttgftlygml ykphdlqpgk
      661 kyptvlfiyg gpqvqlvnnr fkgvkyfrln tlaslgyvvv vidnrgschr glkfegafky
      721 kmgqieiddq veglqylasq ydfidldrvg ihgwsyggyl slmalmqrsd ifrvaiagap
      781 vtlwifydtg yterymghpd qneqgyylgs vamqaekfps epnrllllhg fldenvhfah
      841 tsillsflvr agkpydlqiy pqerhsirvp esgehyelhl lhylqenlgs riaalkvi
//
LOCUS       XP_061014020             898 aa            linear   MAM 02-DEC-2023
DEFINITION  dipeptidyl peptidase 8 isoform X1 [Dama dama].
ACCESSION   XP_061014020
VERSION     XP_061014020.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158037.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..898
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..898
                     /product="dipeptidyl peptidase 8 isoform X1"
                     /calculated_mol_wt=103141
     Region          8..162
                     /region_name="Dpp_8_9_N"
                     /note="Dipeptidyl peptidase 8 and 9 N-terminal; pfam19520"
                     /db_xref="CDD:466112"
     Region          175..595
                     /region_name="DPPIV_N"
                     /note="Dipeptidyl peptidase IV (DPP IV) N-terminal region;
                     pfam00930"
                     /db_xref="CDD:395744"
     Region          687..891
                     /region_name="Peptidase_S9"
                     /note="Prolyl oligopeptidase family; pfam00326"
                     /db_xref="CDD:459761"
     CDS             1..898
                     /gene="DPP8"
                     /coded_by="XM_061158037.1:283..2979"
                     /db_xref="GeneID:133066700"
ORIGIN      
        1 mwkrseqmki qsgkcnmaaa meteqlgvei fetaeceeni esqdrpklep fyveryswsq
       61 lkklladtrk yhgymmakap hdfmfvkrnd pdgphsdriy ylamsgenre ntlfyseipk
      121 tinraavlml swkplldlfq atldygmysr eeellrerkr igtvgiasyd yhqgsgtflf
      181 qagsgiyhvk dggpqgftqq plrpnlvets cpnirmdpkl cpadpdwiaf ihsndiwisn
      241 ivtreerrlt yvhnelanme edprsagvat fvlqeefdry sgywwcpeae ttpsgskilr
      301 ilyeendese veiihvtspm letrradsfr ypktgtanpk vtfkmseili daegriidvi
      361 dkeliqpfei lfegveyiar agwtpegkya wailldrsqt rlqivlispe lfipveddam
      421 erqrfiesvp dsvtpliiye ettdiwinih difhvfpqsh edeiefifas ecktgfrhly
      481 kitsilkesk ykrssgglpa psdfkcpike eiaitsgewe vlgrhgsniq vdevrklvyf
      541 egtkdspleh hlyvvsyvnp gevtrltdrg yshsccisrh cdffiskysn qknphcvsly
      601 klaspdgdpt cktkefwati ldsagplpdy tppeifsfes ttgftlygml ykphdlqpgk
      661 kyptvlfiyg gpqvqlvnnr fkgvkyfrln tlaslgyvvv vidnrgschr glkfegafky
      721 kmgqieiddq veglqylasq ydfidldrvg ihgwsyggyl slmalmqrsd ifrvaiagap
      781 vtlwifydtg yterymghpd qneqgyylgs vamqaekfps epnrllllhg fldenvhfah
      841 tsillsflvr agkpydlqiy pqerhsirvp esgehyelhl lhylqenlgs riaalkvi
//
LOCUS       XP_061014021             729 aa            linear   MAM 02-DEC-2023
DEFINITION  dipeptidyl peptidase 8 isoform X2 [Dama dama].
ACCESSION   XP_061014021
VERSION     XP_061014021.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158038.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..729
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..729
                     /product="dipeptidyl peptidase 8 isoform X2"
                     /calculated_mol_wt=83716
     Region          8..162
                     /region_name="Dpp_8_9_N"
                     /note="Dipeptidyl peptidase 8 and 9 N-terminal; pfam19520"
                     /db_xref="CDD:466112"
     Region          175..595
                     /region_name="DPPIV_N"
                     /note="Dipeptidyl peptidase IV (DPP IV) N-terminal region;
                     pfam00930"
                     /db_xref="CDD:395744"
     Region          637..>706
                     /region_name="DAP2"
                     /note="Dipeptidyl aminopeptidase/acylaminoacyl peptidase
                     [Amino acid transport and metabolism]; COG1506"
                     /db_xref="CDD:441115"
     CDS             1..729
                     /gene="DPP8"
                     /coded_by="XM_061158038.1:2035..4224"
                     /db_xref="GeneID:133066700"
ORIGIN      
        1 mwkrseqmki qsgkcnmaaa meteqlgvei fetaeceeni esqdrpklep fyveryswsq
       61 lkklladtrk yhgymmakap hdfmfvkrnd pdgphsdriy ylamsgenre ntlfyseipk
      121 tinraavlml swkplldlfq atldygmysr eeellrerkr igtvgiasyd yhqgsgtflf
      181 qagsgiyhvk dggpqgftqq plrpnlvets cpnirmdpkl cpadpdwiaf ihsndiwisn
      241 ivtreerrlt yvhnelanme edprsagvat fvlqeefdry sgywwcpeae ttpsgskilr
      301 ilyeendese veiihvtspm letrradsfr ypktgtanpk vtfkmseili daegriidvi
      361 dkeliqpfei lfegveyiar agwtpegkya wailldrsqt rlqivlispe lfipveddam
      421 erqrfiesvp dsvtpliiye ettdiwinih difhvfpqsh edeiefifas ecktgfrhly
      481 kitsilkesk ykrssgglpa psdfkcpike eiaitsgewe vlgrhgsniq vdevrklvyf
      541 egtkdspleh hlyvvsyvnp gevtrltdrg yshsccisrh cdffiskysn qknphcvsly
      601 klaspdgdpt cktkefwati ldsagplpdy tppeifsfes ttgftlygml ykphdlqpgk
      661 kyptvlfiyg gpqvqlvnnr fkgvkyfrln tlaslgyvvv vidnrgschr glkfegafky
      721 kmealnatf
//
LOCUS       XP_061014022            1252 aa            linear   MAM 02-DEC-2023
DEFINITION  immunoglobulin superfamily DCC subclass member 4 [Dama dama].
ACCESSION   XP_061014022
VERSION     XP_061014022.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158039.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1252
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1252
                     /product="immunoglobulin superfamily DCC subclass member
                     4"
                     /calculated_mol_wt=134007
     Region          41..136
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          53..57
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          69..73
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          91..95
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          118..123
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          131..134
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          145..230
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          160..164
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          173..177
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          195..199
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          209..214
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          250..331
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          261..265
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          274..279
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          295..299
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          309..314
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          324..327
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          350..422
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          352..356
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          365..369
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          386..392
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          <402..>614
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          402..407
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          415..418
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Site            order(630,710,725)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          632..727
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     Region          751..843
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(751,816,831)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(832..833,835..836)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          851..943
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(932..933,935..936)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     CDS             1..1252
                     /gene="IGDCC4"
                     /coded_by="XM_061158039.1:9..3767"
                     /db_xref="GeneID:133066702"
ORIGIN      
        1 msrgaagrgs glialtfcll targeqplpq ettvslscga gplqvilgpe qalvldcslg
       61 aaatgpptsv twskdggtlp ehehlrllpn gslwlsqlpt vdgadeadpg aseviegsys
      121 clahgplgvm asqaavvkla tlagfslhpe sqtveengta rfqcqiegvp apvitwekdq
      181 vtlpedprli tlpngvlqil dvqegdagsy rcvatnsarq rfsqeallrv ahrgslasag
      241 gqdvvivaap enttvvsgqs vvmecvasad ptpfvswvrq dgkpistdvi vlgrtnllik
      301 saqprhsgvy vcrankprtr dfataaaelr vlaapvisqa pealsrtras tarfvcrasg
      361 eprpwlrwlh dgaplrpngr vkvqggggsl vitqirlqda gyyqcvaeng agtacaaapl
      421 avvvreglps aptrvtatpl sssavlvawe rpelhseqii gfslhyqkar gvdnveyqfa
      481 vnndttelqv rdlepntdye fyvvaysqlg asrtsspalv htlddapsaa pqlslsspnp
      541 sdirvawlpl ppglsngqvv kykieyglgk edqifstevp gnetqftlns lqpnkvyrvr
      601 isagtgagyg apspwmqhrt psvhnqshvp faptelkvra rmeslvvswq ppphpaqisg
      661 yklywrevgt eeeemdgesp pggrgdqawd vgpvrlkkkv kqyeltqlvp grlyevklva
      721 fnkhedgyaa vwkgktekap tpdlpiqrgp plppahvhae snsstsiwlr wkkpdfttvk
      781 ivnytvrfsp wglrnaslvt yytssgedil igglkpftky efavqshgvd mdgpfgsvve
      841 rstlpdrpst ppsdlrlspl tpstvrlhwc pptepngeiv eylilysnnh tqpehqwtll
      901 ttegnifsae vhglesdtry ffkmgartev gpgpfsglqd vitlqeklsd sldvhsvtgi
      961 ivgvclgllc llacmcaglr rsphrealpg lsssatagnp alysrarlap psppavhele
     1021 slvhprpqdw spppsdiedr aevhslmggg asagrghskr kiswaqpggp swagswagce
     1081 lpqagpmpsl trallppagt gqtlllqalv yeaikgngrk kppsacrnqv eaevivhsdf
     1141 sasngtpdlh lqdlepedsl pseapdltss vvdldqgedw ldrepggceq aapgpdrltc
     1201 lpeaasdscp ysdlqsreal eeapgnncqp kapyppgasp slskapvpss st
//
LOCUS       XP_061014023            1182 aa            linear   MAM 02-DEC-2023
DEFINITION  cartilage intermediate layer protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061014023
VERSION     XP_061014023.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158040.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1182
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1182
                     /product="cartilage intermediate layer protein 1 isoform
                     X1"
                     /calculated_mol_wt=131869
     Region          56..139
                     /region_name="Mucin2_WxxW"
                     /note="Mucin-2 protein WxxW repeating region; pfam13330"
                     /db_xref="CDD:463846"
     Region          153..202
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          227..>268
                     /region_name="CarboxypepD_reg"
                     /note="Carboxypeptidase regulatory-like domain; pfam13620"
                     /db_xref="CDD:433354"
     Region          310..379
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     CDS             1..1182
                     /gene="CILP"
                     /coded_by="XM_061158040.1:407..3955"
                     /db_xref="GeneID:133066703"
ORIGIN      
        1 magtkacmff llvleitsal grqmmltqsv rrvqpgkrts gvfakpanll dspgewttwf
       61 nidhpggqgd yerldaiqfy ygdrvcarpl rlearttswt pagstgqvvh gsplegfwcl
      121 nreqrpgqnc snytvrflcp pgslrrdter slwspwspws kcsaacghpg vqtrsrtcla
      181 etvslcseat eegrhcmeqa csacdltcpm gkpnaecdac mcqdfvlyga vslpggapas
      241 gavvyllskt pklltrtdss grfrvpglcp dgksilkitk tkfvpihlmv pktglkaati
      301 raefvraetp yivmnpetka rragqsvslc ckatgkpkpd kyfwyhnntl ldpslykhds
      361 klvlrnlqrd qageyfckaq sdagaaksri aqltviapde ipcnptpesy lirlphdcfq
      421 natnsfyydv grcpvktcag qqdngircrd avehccgisk teereiqcsg ytlptkvate
      481 cscqrctetr rivrgrvsaa dngeplrfgh vymgntrvsm tgykgtftlh vpqdterlvl
      541 tfvdrmqkfv nttkvlpfnk kgsavfheik mlrrkepitl eametniipl gdmagedpva
      601 eleipsksfy rqngepylgk vkasvtfldp rnistataaq sdlnfindeg dtfplrtygm
      661 fsvdfrdeat seslnvgkvk vhldstqvkm pehvsmmklw slnpdtglwe eegdfkpesq
      721 rrnrredrtf lvgnmeirer rlfnldvpes rrcfikvray rserflpseq iqgvvvsvin
      781 leprtgfssn prawgrfdsv ltgpngaclp afcddqspda ysayvlasla geeleavess
      841 pkfnpnaigv pqpylnklky rrtdhedprv kktafqisma kprpnsaeeg ngpiyafenl
      901 qacedappsa ahfrfyqieg drydyntvpf ndddpmswte dylawwpkpm efracyikvr
      961 ivglpeinvr srnmggthrr tvgklygird vrstrdrdqp nvssaclefk csgmlydqdr
     1021 vdrtlvkvip qgscqrasvn smlheylvnh lplavnndts eytmlapldp lghnygiytv
     1081 tdqdprtake ialgrcfdgt sdgssrvmka nvgvaltfnc verqvgrqsa fqylqstqaq
     1141 pspassvrgr vpsrrqrasq gsqrggvasl rfpgaaqqpl sd
//
LOCUS       XP_061014024            1092 aa            linear   MAM 02-DEC-2023
DEFINITION  cartilage intermediate layer protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061014024
VERSION     XP_061014024.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158041.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1092
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1092
                     /product="cartilage intermediate layer protein 1 isoform
                     X2"
                     /calculated_mol_wt=121766
     Region          63..112
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          137..>178
                     /region_name="CarboxypepD_reg"
                     /note="Carboxypeptidase regulatory-like domain; pfam13620"
                     /db_xref="CDD:433354"
     Region          220..289
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     CDS             1..1092
                     /gene="CILP"
                     /coded_by="XM_061158041.1:407..3685"
                     /db_xref="GeneID:133066703"
ORIGIN      
        1 magtkacmff llvleitsal grqmmltqsv rrvqpgkrts gvfakpanll drslrrdter
       61 slwspwspws kcsaacghpg vqtrsrtcla etvslcseat eegrhcmeqa csacdltcpm
      121 gkpnaecdac mcqdfvlyga vslpggapas gavvyllskt pklltrtdss grfrvpglcp
      181 dgksilkitk tkfvpihlmv pktglkaati raefvraetp yivmnpetka rragqsvslc
      241 ckatgkpkpd kyfwyhnntl ldpslykhds klvlrnlqrd qageyfckaq sdagaaksri
      301 aqltviapde ipcnptpesy lirlphdcfq natnsfyydv grcpvktcag qqdngircrd
      361 avehccgisk teereiqcsg ytlptkvate cscqrctetr rivrgrvsaa dngeplrfgh
      421 vymgntrvsm tgykgtftlh vpqdterlvl tfvdrmqkfv nttkvlpfnk kgsavfheik
      481 mlrrkepitl eametniipl gdmagedpva eleipsksfy rqngepylgk vkasvtfldp
      541 rnistataaq sdlnfindeg dtfplrtygm fsvdfrdeat seslnvgkvk vhldstqvkm
      601 pehvsmmklw slnpdtglwe eegdfkpesq rrnrredrtf lvgnmeirer rlfnldvpes
      661 rrcfikvray rserflpseq iqgvvvsvin leprtgfssn prawgrfdsv ltgpngaclp
      721 afcddqspda ysayvlasla geeleavess pkfnpnaigv pqpylnklky rrtdhedprv
      781 kktafqisma kprpnsaeeg ngpiyafenl qacedappsa ahfrfyqieg drydyntvpf
      841 ndddpmswte dylawwpkpm efracyikvr ivglpeinvr srnmggthrr tvgklygird
      901 vrstrdrdqp nvssaclefk csgmlydqdr vdrtlvkvip qgscqrasvn smlheylvnh
      961 lplavnndts eytmlapldp lghnygiytv tdqdprtake ialgrcfdgt sdgssrvmka
     1021 nvgvaltfnc verqvgrqsa fqylqstqaq pspassvrgr vpsrrqrasq gsqrggvasl
     1081 rfpgaaqqpl sd
//
LOCUS       XP_061014026             330 aa            linear   MAM 02-DEC-2023
DEFINITION  protein mono-ADP-ribosyltransferase PARP16 isoform X1 [Dama dama].
ACCESSION   XP_061014026
VERSION     XP_061014026.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158043.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..330
                     /product="protein mono-ADP-ribosyltransferase PARP16
                     isoform X1"
                     /calculated_mol_wt=36974
     Region          11..90
                     /region_name="ARTD15_N"
                     /note="ARTD15 N-terminal domain; pfam18084"
                     /db_xref="CDD:465641"
     Region          102..273
                     /region_name="PARP"
                     /note="Poly(ADP-ribose) polymerase catalytic domain;
                     pfam00644"
                     /db_xref="CDD:395519"
     CDS             1..330
                     /gene="PARP16"
                     /coded_by="XM_061158043.1:369..1361"
                     /db_xref="GeneID:133066704"
ORIGIN      
        1 mqpagraavr eaagrdvlaa dlrcsffasa lrsykrdsvl rpfpasyarh dckdfealla
       61 dasklpnlke llqssgekdp wawdlmswil sskvltihsa gksefekiqk ltgtphtpvp
      121 vpdflfevey sdpanakfye tkgerdliya fhgsrlenfh siihnglhch lnktslfgeg
      181 tyltsdlsla liysphghgw qhsllgpils cvavcevidh pdvkcqtkkk dskeidrrra
      241 rikhseggdv ppkyfvvtnn qllrvkyllv ysqkqpnsra ssqlswvssh wftvmitlyl
      301 lllltnpdlt gdspvtqpyp teqparskpt
//
LOCUS       XP_061014027             329 aa            linear   MAM 02-DEC-2023
DEFINITION  protein mono-ADP-ribosyltransferase PARP16 isoform X2 [Dama dama].
ACCESSION   XP_061014027
VERSION     XP_061014027.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158044.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..329
                     /product="protein mono-ADP-ribosyltransferase PARP16
                     isoform X2"
                     /calculated_mol_wt=36887
     Region          11..90
                     /region_name="ARTD15_N"
                     /note="ARTD15 N-terminal domain; pfam18084"
                     /db_xref="CDD:465641"
     Region          102..273
                     /region_name="PARP"
                     /note="Poly(ADP-ribose) polymerase catalytic domain;
                     pfam00644"
                     /db_xref="CDD:395519"
     CDS             1..329
                     /gene="PARP16"
                     /coded_by="XM_061158044.1:364..1353"
                     /db_xref="GeneID:133066704"
ORIGIN      
        1 mqpagraavr eaagrdvlaa dlrcsffasa lrsykrdsvl rpfpasyarh dckdfealla
       61 dasklpnlke llqssgekdp wawdlmswil sskvltihsa gksefekiqk ltgtphtpvp
      121 vpdflfevey sdpanakfye tkgerdliya fhgsrlenfh siihnglhch lnktslfgeg
      181 tyltsdlsla liysphghgw qhsllgpils cvavcevidh pdvkcqtkkk dskeidrrra
      241 rikhseggdv ppkyfvvtnn qllrvkyllv ysqkqpnras sqlswvsshw ftvmitlyll
      301 llltnpdltg dspvtqpypt eqparskpt
//
LOCUS       XP_061014028             323 aa            linear   MAM 02-DEC-2023
DEFINITION  protein mono-ADP-ribosyltransferase PARP16 isoform X3 [Dama dama].
ACCESSION   XP_061014028
VERSION     XP_061014028.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158045.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..323
                     /product="protein mono-ADP-ribosyltransferase PARP16
                     isoform X3"
                     /calculated_mol_wt=36425
     Region          11..90
                     /region_name="ARTD15_N"
                     /note="ARTD15 N-terminal domain; pfam18084"
                     /db_xref="CDD:465641"
     Region          102..273
                     /region_name="PARP"
                     /note="Poly(ADP-ribose) polymerase catalytic domain;
                     pfam00644"
                     /db_xref="CDD:395519"
     CDS             1..323
                     /gene="PARP16"
                     /coded_by="XM_061158045.1:362..1333"
                     /db_xref="GeneID:133066704"
ORIGIN      
        1 mqpagraavr eaagrdvlaa dlrcsffasa lrsykrdsvl rpfpasyarh dckdfealla
       61 dasklpnlke llqssgekdp wawdlmswil sskvltihsa gksefekiqk ltgtphtpvp
      121 vpdflfevey sdpanakfye tkgerdliya fhgsrlenfh siihnglhch lnktslfgeg
      181 tyltsdlsla liysphghgw qhsllgpils cvavcevidh pdvkcqtkkk dskeidrrra
      241 rikhseggdv ppkyfvvtnn qllrvkyllv ysqkqpnsra ssqlswvssh wftvmitlyl
      301 lllltvsvin ssafqhfwnr akr
//
LOCUS       XP_061014029             322 aa            linear   MAM 02-DEC-2023
DEFINITION  protein mono-ADP-ribosyltransferase PARP16 isoform X4 [Dama dama].
ACCESSION   XP_061014029
VERSION     XP_061014029.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158046.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..322
                     /product="protein mono-ADP-ribosyltransferase PARP16
                     isoform X4"
                     /calculated_mol_wt=36338
     Region          11..90
                     /region_name="ARTD15_N"
                     /note="ARTD15 N-terminal domain; pfam18084"
                     /db_xref="CDD:465641"
     Region          102..273
                     /region_name="PARP"
                     /note="Poly(ADP-ribose) polymerase catalytic domain;
                     pfam00644"
                     /db_xref="CDD:395519"
     CDS             1..322
                     /gene="PARP16"
                     /coded_by="XM_061158046.1:353..1321"
                     /db_xref="GeneID:133066704"
ORIGIN      
        1 mqpagraavr eaagrdvlaa dlrcsffasa lrsykrdsvl rpfpasyarh dckdfealla
       61 dasklpnlke llqssgekdp wawdlmswil sskvltihsa gksefekiqk ltgtphtpvp
      121 vpdflfevey sdpanakfye tkgerdliya fhgsrlenfh siihnglhch lnktslfgeg
      181 tyltsdlsla liysphghgw qhsllgpils cvavcevidh pdvkcqtkkk dskeidrrra
      241 rikhseggdv ppkyfvvtnn qllrvkyllv ysqkqpnras sqlswvsshw ftvmitlyll
      301 llltvsvins safqhfwnra kr
//
LOCUS       XP_061014030             261 aa            linear   MAM 02-DEC-2023
DEFINITION  protein mono-ADP-ribosyltransferase PARP16 isoform X5 [Dama dama].
ACCESSION   XP_061014030
VERSION     XP_061014030.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158047.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..261
                     /product="protein mono-ADP-ribosyltransferase PARP16
                     isoform X5"
                     /calculated_mol_wt=28996
     Region          11..90
                     /region_name="ARTD15_N"
                     /note="ARTD15 N-terminal domain; pfam18084"
                     /db_xref="CDD:465641"
     Region          <107..204
                     /region_name="PARP"
                     /note="Poly(ADP-ribose) polymerase catalytic domain;
                     pfam00644"
                     /db_xref="CDD:395519"
     CDS             1..261
                     /gene="PARP16"
                     /coded_by="XM_061158047.1:397..1182"
                     /db_xref="GeneID:133066704"
ORIGIN      
        1 mqpagraavr eaagrdvlaa dlrcsffasa lrsykrdsvl rpfpasyarh dckdfealla
       61 dasklpnlke llqssgekdp wawdlmswil sskvltihsa gksetslfge gtyltsdlsl
      121 aliysphghg wqhsllgpil scvavcevid hpdvkcqtkk kdskeidrrr arikhseggd
      181 vppkyfvvtn nqllrvkyll vysqkqpnsr assqlswvss hwftvmitly llllltnpdl
      241 tgdspvtqpy pteqparskp t
//
LOCUS       XP_061014031             207 aa            linear   MAM 02-DEC-2023
DEFINITION  protein mono-ADP-ribosyltransferase PARP16 isoform X6 [Dama dama].
ACCESSION   XP_061014031
VERSION     XP_061014031.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158048.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..207
                     /product="protein mono-ADP-ribosyltransferase PARP16
                     isoform X6"
                     /calculated_mol_wt=23296
     Region          11..>64
                     /region_name="ARTD15_N"
                     /note="ARTD15 N-terminal domain; pfam18084"
                     /db_xref="CDD:465641"
     Region          <61..158
                     /region_name="PARP"
                     /note="Poly(ADP-ribose) polymerase catalytic domain;
                     pfam00644"
                     /db_xref="CDD:395519"
     CDS             1..207
                     /gene="PARP16"
                     /coded_by="XM_061158048.1:365..988"
                     /db_xref="GeneID:133066704"
ORIGIN      
        1 mqpagraavr eaagrdvlaa dlrcsffasa lrsykrdsvl rpfpasyarh dckdfealts
       61 lfgegtylts dlslaliysp hghgwqhsll gpilscvavc evidhpdvkc qtkkkdskei
      121 drrrarikhs eggdvppkyf vvtnnqllrv kyllvysqkq pnrassqlsw vsshwftvmi
      181 tlyllllltv svinssafqh fwnrakr
//
LOCUS       XP_061014032             633 aa            linear   MAM 02-DEC-2023
DEFINITION  ATP-dependent Clp protease ATP-binding subunit clpX-like,
            mitochondrial [Dama dama].
ACCESSION   XP_061014032
VERSION     XP_061014032.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158049.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..633
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     clpX-like, mitochondrial"
                     /calculated_mol_wt=69155
     Region          104..132
                     /region_name="Zn-ribbon"
                     /note="C-terminal zinc ribbon domain of RNA polymerase
                     intrinsic transcript cleavage subunit; cl02609"
                     /db_xref="CDD:445850"
     Site            order(105,108,127,130)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:259791"
     Region          172..605
                     /region_name="ClpX"
                     /note="ATP-dependent protease Clp, ATPase subunit ClpX
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG1219"
                     /db_xref="CDD:440832"
     CDS             1..633
                     /gene="CLPX"
                     /coded_by="XM_061158049.1:204..2105"
                     /db_xref="GeneID:133066706"
ORIGIN      
        1 msgcgactcg aaaarifsss lvsaqrgisc srihipvlgr lgtfetqvlr rapfraftet
       61 payfasrdgi skdgsgdgnk ksasegsskk sgsgnsgkgg nqlrcpkcgd lcthvetfvs
      121 strfvkcekc hhffvvlsea dskksiikep esaaeavkla fqqkpppppk kiynyldkyv
      181 vgqsfakkvl svavynhykr iynnipanlr qqaevekqts ltpreleirr redeyrftkl
      241 lqiagisphg nalgasvqqq vnqqipqekr ggevldsshd dikleksnil llgptgsgkt
      301 llaqtlakcl dvpfaicdct tltqagyvge diesviakll qdanynveka qqgivfldev
      361 dkigsvpgih qlrdvggegv qqgllklleg tivnvpekns rklrgetvqv dttnvlfvas
      421 gafngldrii srrknekylg fgtpsnlgkg rraaaaadla nrsgesnthq dieekdrllr
      481 hveardlief gmipefvgrl pvvvplhsld ektlvqilte prnavipqyq alfsmdkcel
      541 nvtedalkai arlalerktg arglrsimek lllepmfevp nsdivcvevd kevvegkkep
      601 gyiraptkes seeeydsgve eegwprqada ans
//
LOCUS       XP_061014033             487 aa            linear   MAM 02-DEC-2023
DEFINITION  programmed cell death protein 7 [Dama dama].
ACCESSION   XP_061014033
VERSION     XP_061014033.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158050.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..487
                     /product="programmed cell death protein 7"
                     /calculated_mol_wt=54390
     Region          171..483
                     /region_name="PDCD7"
                     /note="Programmed cell death protein 7; pfam16021"
                     /db_xref="CDD:464979"
     CDS             1..487
                     /gene="PDCD7"
                     /coded_by="XM_061158050.1:1..1464"
                     /db_xref="GeneID:133066708"
ORIGIN      
        1 malppffapg rpgppppqpp ppapfgcppp plpspafppp lpqrpgsfpg asapflqppl
       61 alqprapgev srgggggggg gsfypvpppp lpppppqcrp flgsdagerp rppppgpgpp
      121 wsprwpeapp psdalgdaal qrlrdrqwle avfgtprras gsvpprapag pslgevrarl
      181 rgalrlvrrl rdlgqalrea eadgaawaql haqaqplrae laerlelltq aayvgearrr
      241 lervrrrrlr lrervrerea ereaeaaraa ereqeidrwr vqcvqeveek kreqelkaaa
      301 dgvlsevrkk qadtkrmvdi lraleklrkl rkeaaarkgv cppasadetf ehhlqrlrkl
      361 ikkrselyea eeralqvmle geqeeerkre lekkqrkeke kfllqkheie sklfgnpdef
      421 plahllqpfr qyylqaehsl paliqirhdw dqylvpsdhp kgsaipqgwv lpplpsndiw
      481 atavklh
//
LOCUS       XP_061014034             384 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin-associated protein 1-like [Dama dama].
ACCESSION   XP_061014034
VERSION     XP_061014034.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158051.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..384
                     /product="ubiquitin-associated protein 1-like"
                     /calculated_mol_wt=41521
     Region          <186..270
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          344..380
                     /region_name="UBA2_UBAP1_like"
                     /note="UBA2 domain found in ubiquitin-associated protein 1
                     (UBAP-1) and similar proteins; cd14316"
                     /db_xref="CDD:270501"
     Site            order(363,366..367)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270501"
     CDS             1..384
                     /gene="UBAP1L"
                     /coded_by="XM_061158051.1:1..1155"
                     /db_xref="GeneID:133066709"
ORIGIN      
        1 mnalddvpfk vpkgfvidte plpgpdlsvp dcrelllgsm hdfslerrtl fwveavirgp
       61 cpvqcdapga asappawlll aspeqgpepv saavedleag sqeqpeeeke eeedqdeeaa
      121 saveeepepc spqpssaasp rlgqhrcsld vlrgvrsela garrrlsegr lashprsllh
      181 rlrhralslc pgpaslpsar tpplgpkpsl pstpelpprp stagampplr shkptvasls
      241 phtclpppgq vaqpcaahrp hpdsadllsa lsqeeqdlig pvvalgyplh raivalqktg
      301 rqslsqflsy lsacdrllrq gyeeglvdea memfqfsesq ageflrlseq fsdmgfqqdr
      361 ikevllvhgn rreqaleelv acaq
//
LOCUS       XP_061014035             292 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-like protein family member 12 isoform X1 [Dama dama].
ACCESSION   XP_061014035
VERSION     XP_061014035.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158052.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..292
                     /product="ras-like protein family member 12 isoform X1"
                     /calculated_mol_wt=32108
     Region          22..211
                     /region_name="RERG_RasL11_like"
                     /note="Ras-related and Estrogen-Regulated Growth inhibitor
                     (RERG) and Ras-like 11 (RasL11)-like families; cd04146"
                     /db_xref="CDD:206713"
     Site            27..34
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206713"
     Site            order(28..29,102..103)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206713"
     Site            order(30..35,48,160..161,163,190..192)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206713"
     Site            order(34..35,49,51,83..84,97..98,100,102..103,192)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206713"
     Site            order(50..53,82..84)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206713"
     Site            order(50..51,81..84)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206713"
     Site            52
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206713"
     Site            100..103
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206713"
     Site            order(102..103,108..119)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206713"
     Site            160..163
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206713"
     Site            190..192
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206713"
     CDS             1..292
                     /gene="RASL12"
                     /coded_by="XM_061158052.1:68..946"
                     /db_xref="GeneID:133066710"
ORIGIN      
        1 masvfgkpra gggpqsaple vnlailgrrg agksaltvkf ltrrfiseyd pnlgkdppta
       61 prssgcvpld splhthvhce dtysseetvd hqpvhlrvmd tadldtprnc erylnwahaf
      121 lvvysvdsrq sfegsssyle llalhaketq rsfpalllgn kldmaqyrqv tqaegaalag
      181 rfgclffevs acldfehvqh vfheavrear releknslar plfiseerav hhqapltarh
      241 glasctfntl staslkempa vaqaklvtvk ssraqskrka ptltllkgfk if
//
LOCUS       XP_061014037             266 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-like protein family member 12 isoform X2 [Dama dama].
ACCESSION   XP_061014037
VERSION     XP_061014037.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158054.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..266
                     /product="ras-like protein family member 12 isoform X2"
                     /calculated_mol_wt=29417
     Region          22..185
                     /region_name="RERG_RasL11_like"
                     /note="Ras-related and Estrogen-Regulated Growth inhibitor
                     (RERG) and Ras-like 11 (RasL11)-like families; cd04146"
                     /db_xref="CDD:206713"
     Site            27..34
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206713"
     Site            order(28..29,76..77)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206713"
     Site            order(30..35,48,134..135,137,164..166)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206713"
     Site            order(34..35,49,51,57..58,71..72,74,76..77,166)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206713"
     Site            order(50..53,56..58)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206713"
     Site            order(50..51,55..58)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206713"
     Site            52
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206713"
     Site            74..77
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206713"
     Site            order(76..77,82..93)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206713"
     Site            134..137
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206713"
     Site            164..166
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206713"
     CDS             1..266
                     /gene="RASL12"
                     /coded_by="XM_061158054.1:68..868"
                     /db_xref="GeneID:133066710"
ORIGIN      
        1 masvfgkpra gggpqsaple vnlailgrrg agksaltvkf ltrrfiseyd pnledtysse
       61 etvdhqpvhl rvmdtadldt prncerylnw ahaflvvysv dsrqsfegss sylellalha
      121 ketqrsfpal llgnkldmaq yrqvtqaega alagrfgclf fevsacldfe hvqhvfheav
      181 rearrelekn slarplfise eravhhqapl tarhglasct fntlstaslk empavaqakl
      241 vtvkssraqs krkaptltll kgfkif
//
LOCUS       XP_061014038             259 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-like protein family member 12 isoform X3 [Dama dama].
ACCESSION   XP_061014038
VERSION     XP_061014038.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158055.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..259
                     /product="ras-like protein family member 12 isoform X3"
                     /calculated_mol_wt=28906
     Region          2..178
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            19
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            48..50
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            67..70
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            order(69..70,85..86)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     Site            127..130
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            157..159
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     CDS             1..259
                     /gene="RASL12"
                     /coded_by="XM_061158055.1:16..795"
                     /db_xref="GeneID:133066710"
ORIGIN      
        1 maltvkfltr rfiseydpnl gkdpptaprs sgcvpldspl hthvhcedty sseetvdhqp
       61 vhlrvmdtad ldtprncery lnwahaflvv ysvdsrqsfe gsssylella lhaketqrsf
      121 palllgnkld maqyrqvtqa egaalagrfg clffevsacl dfehvqhvfh eavrearrel
      181 eknslarplf iseeravhhq apltarhgla sctfntlsta slkempavaq aklvtvkssr
      241 aqskrkaptl tllkgfkif
//
LOCUS       XP_061014039             253 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-like protein family member 12 isoform X4 [Dama dama].
ACCESSION   XP_061014039
VERSION     XP_061014039.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158056.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..253
                     /product="ras-like protein family member 12 isoform X4"
                     /calculated_mol_wt=27837
     Region          22..>168
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            27..34
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206648"
     Site            52
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            81..83
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            100..103
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            order(102..103,118..119)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     Site            160..163
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     CDS             1..253
                     /gene="RASL12"
                     /coded_by="XM_061158056.1:68..829"
                     /db_xref="GeneID:133066710"
ORIGIN      
        1 masvfgkpra gggpqsaple vnlailgrrg agksaltvkf ltrrfiseyd pnlgkdppta
       61 prssgcvpld splhthvhce dtysseetvd hqpvhlrvmd tadldtprnc erylnwahaf
      121 lvvysvdsrq sfegsssyle llalhaketq rsfpalllgn kldmaqyrsp rlrappwqag
      181 sgacfsrslp awtlstcsms strrygrrgg swrrtpwpgl sssrrrelci trphsrpatg
      241 wpaapsthfl ppa
//
LOCUS       XP_061014040             233 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-like protein family member 12 isoform X5 [Dama dama].
ACCESSION   XP_061014040
VERSION     XP_061014040.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158057.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..233
                     /product="ras-like protein family member 12 isoform X5"
                     /calculated_mol_wt=26215
     Region          2..152
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            19
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            22..24
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            41..44
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            order(43..44,59..60)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     Site            101..104
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            131..133
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     CDS             1..233
                     /gene="RASL12"
                     /coded_by="XM_061158057.1:66..767"
                     /db_xref="GeneID:133066710"
ORIGIN      
        1 maltvkfltr rfiseydpnl edtysseetv dhqpvhlrvm dtadldtprn cerylnwaha
       61 flvvysvdsr qsfegsssyl ellalhaket qrsfpalllg nkldmaqyrq vtqaegaala
      121 grfgclffev sacldfehvq hvfheavrea rreleknsla rplfiseera vhhqapltar
      181 hglasctfnt lstaslkemp avaqaklvtv kssraqskrk aptltllkgf kif
//
LOCUS       XP_061014041             214 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-like protein family member 12 isoform X6 [Dama dama].
ACCESSION   XP_061014041
VERSION     XP_061014041.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158058.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..214
                     /product="ras-like protein family member 12 isoform X6"
                     /calculated_mol_wt=23949
     Region          2..133
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            3..5
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            22..25
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            order(24..25,40..41)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     Site            82..85
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            112..114
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     CDS             1..214
                     /gene="RASL12"
                     /coded_by="XM_061158058.1:33..677"
                     /db_xref="GeneID:133066710"
ORIGIN      
        1 medtysseet vdhqpvhlrv mdtadldtpr ncerylnwah aflvvysvds rqsfegsssy
       61 lellalhake tqrsfpalll gnkldmaqyr qvtqaegaal agrfgclffe vsacldfehv
      121 qhvfheavre arreleknsl arplfiseer avhhqaplta rhglasctfn tlstaslkem
      181 pavaqaklvt vkssraqskr kaptltllkg fkif
//
LOCUS       XP_061014042             130 aa            linear   MAM 02-DEC-2023
DEFINITION  organic solute transporter subunit beta [Dama dama].
ACCESSION   XP_061014042
VERSION     XP_061014042.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158059.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..130
                     /product="organic solute transporter subunit beta"
                     /calculated_mol_wt=14497
     Region          3..123
                     /region_name="OSTbeta"
                     /note="Organic solute transporter subunit beta protein;
                     pfam15048"
                     /db_xref="CDD:405697"
     CDS             1..130
                     /gene="SLC51B"
                     /coded_by="XM_061158059.1:562..954"
                     /db_xref="GeneID:133066711"
ORIGIN      
        1 mnyseeltra ppitevpqel leemlwffrv edatpwnssm fvlaalvvmi sfillgrniq
       61 anrnqkklpp ekqtpealyl aeggnkddnn ltvltetlls ekptlapgem dakcrdvplv
      121 rlpgpqeses
//
LOCUS       XP_061014043             130 aa            linear   MAM 02-DEC-2023
DEFINITION  organic solute transporter subunit beta [Dama dama].
ACCESSION   XP_061014043
VERSION     XP_061014043.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158060.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..130
                     /product="organic solute transporter subunit beta"
                     /calculated_mol_wt=14497
     Region          3..123
                     /region_name="OSTbeta"
                     /note="Organic solute transporter subunit beta protein;
                     pfam15048"
                     /db_xref="CDD:405697"
     CDS             1..130
                     /gene="SLC51B"
                     /coded_by="XM_061158060.1:463..855"
                     /db_xref="GeneID:133066711"
ORIGIN      
        1 mnyseeltra ppitevpqel leemlwffrv edatpwnssm fvlaalvvmi sfillgrniq
       61 anrnqkklpp ekqtpealyl aeggnkddnn ltvltetlls ekptlapgem dakcrdvplv
      121 rlpgpqeses
//
LOCUS       XP_061014044             391 aa            linear   MAM 02-DEC-2023
DEFINITION  methionyl-tRNA formyltransferase, mitochondrial isoform X1 [Dama
            dama].
ACCESSION   XP_061014044
VERSION     XP_061014044.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158061.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..391
                     /product="methionyl-tRNA formyltransferase, mitochondrial
                     isoform X1"
                     /calculated_mol_wt=43549
     Region          28..362
                     /region_name="fmt"
                     /note="methionyl-tRNA formyltransferase; TIGR00460"
                     /db_xref="CDD:273088"
     CDS             1..391
                     /gene="MTFMT"
                     /coded_by="XM_061158061.1:10..1185"
                     /db_xref="GeneID:133066712"
ORIGIN      
        1 mrvlvrcccg plpvgggagr rpnprwrala rlsaapgwed gqgarvrekp pwrvlffgtd
       61 qfaretlral haarenkeee lieklevvtv pspspkglpv kqyavqsqlp vyewpdvgsg
      121 eydvgvvasf grllsealil kfpygilnvh psclprwrgp apiihtilhg dtvagvtimq
      181 ikpkrfdvgp ilkqetvpvp pkstskelea vlsrlganml isvlknlpes lnnerqqpae
      241 gvthapkisa atscinweeq tseqifrlyr avgniiplqt lwmdntikll dlvevdssil
      301 sdskltgqav ipglviyhkq sqillvcckd ewigvrsvml kktltatdfy ngylhpwyqk
      361 nshaqpsqcr fqtlrlppkk kkqkkknvam q
//
LOCUS       XP_061014045             337 aa            linear   MAM 02-DEC-2023
DEFINITION  methionyl-tRNA formyltransferase, mitochondrial isoform X2 [Dama
            dama].
ACCESSION   XP_061014045
VERSION     XP_061014045.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158062.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..337
                     /product="methionyl-tRNA formyltransferase, mitochondrial
                     isoform X2"
                     /calculated_mol_wt=37572
     Region          28..308
                     /region_name="fmt"
                     /note="methionyl-tRNA formyltransferase; TIGR00460"
                     /db_xref="CDD:273088"
     CDS             1..337
                     /gene="MTFMT"
                     /coded_by="XM_061158062.1:10..1023"
                     /db_xref="GeneID:133066712"
ORIGIN      
        1 mrvlvrcccg plpvgggagr rpnprwrala rlsaapgwed gqgarvrekp pwrvlffgtd
       61 qfaretlral haarenkeee lieklevvtv pspspkglpv kqyavqsqlp vyewpdvgsg
      121 eydvgvvasf grllsealil kfpygilnvh psclprwrgp apiihtilhg dtvagvtimq
      181 ikpkrfdvgp ilkqetvpvp pkstskelea vlsrlganml isvlknlpes lnnerqqpae
      241 gvthapkisa atscinweeq tseqifrlyr avgnidewig vrsvmlkktl tatdfyngyl
      301 hpwyqknsha qpsqcrfqtl rlppkkkkqk kknvamq
//
LOCUS       XP_061014046             308 aa            linear   MAM 02-DEC-2023
DEFINITION  maspardin [Dama dama].
ACCESSION   XP_061014046
VERSION     XP_061014046.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158063.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..308
                     /product="maspardin"
                     /calculated_mol_wt=34902
     Region          45..266
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     CDS             1..308
                     /gene="SPG21"
                     /coded_by="XM_061158063.1:165..1091"
                     /db_xref="GeneID:133066714"
ORIGIN      
        1 mgeikvspdy nwfrstvplk kiivddddsk iwslydagpr nircpliflp pvsgtadvff
       61 rqilaltgwg yrvialqypv ywdhlefcdg frklldhlql dkvhlfgasl ggflaqkfae
      121 ythksprvhs lilcnsfsdt sifnqtwtan sfwlmpsfml kkivlgnfss gpvdpmmada
      181 idfmvdrles lgqselasrl tlncqnsyve phkirdipvt imdvfdqsal steakeemyk
      241 lypnarrahl ktggnfpylc rsaevnlyvq ihllqfhgtk yaaidpsmvs aeelevqkgs
      301 lgisqeeq
//
LOCUS       XP_061014047             352 aa            linear   MAM 02-DEC-2023
DEFINITION  prostaglandin E2 receptor EP2 subtype [Dama dama].
ACCESSION   XP_061014047
VERSION     XP_061014047.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158064.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..352
                     /product="prostaglandin E2 receptor EP2 subtype"
                     /calculated_mol_wt=39595
     Region          22..321
                     /region_name="7tmA_PGE2_EP2"
                     /note="prostaglandin E2 receptor EP2 subtype, member of
                     the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15139"
                     /db_xref="CDD:320267"
     Region          23..49
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320267"
     Region          67..93
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320267"
     Site            order(89,92..93,109..114,116..117,120,165,167..171,192,
                     195..197,199..201,203..204,271,274..275,277..278,281,
                     287..288,290..292,295,298..299)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320267"
     Region          109..139
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320267"
     Region          151..173
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320267"
     Region          192..221
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320267"
     Region          251..281
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320267"
     Region          288..313
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320267"
     CDS             1..352
                     /gene="PTGER2"
                     /coded_by="XM_061158064.1:167..1225"
                     /db_xref="GeneID:133066715"
ORIGIN      
        1 mgntynvsqs enreeprwlp pgespaissv mftagvlgnl ialallvrrw rgdsgrsagr
       61 gnsislfhvl vtelvltdll gtclispvvl asyaqnrtlv algpdrrvct yfafsmtffs
      121 latmlmlfam alerylaigh pyfyrrrvtr rsglavlpti yivsllfcsl pllehwkyaq
      181 yspgtwcfig hkqttylrly atllllliia vlacnfsviv nlihmhrrgr rsrcgpslgs
      241 shrraervsm aeetdhlill aimtitfavc slpftifaym nenssrkekw dllalrflsi
      301 nsiidpwvfa ilrppvlrlm rsvlccrdsl rtqeatqtsc stqsnaskqi dl
//
LOCUS       XP_061014048             818 aa            linear   MAM 02-DEC-2023
DEFINITION  thioredoxin domain-containing protein 16 [Dama dama].
ACCESSION   XP_061014048
VERSION     XP_061014048.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158065.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..818
                     /product="thioredoxin domain-containing protein 16"
                     /calculated_mol_wt=92217
     Region          392..490
                     /region_name="PDI_a_family"
                     /note="Protein Disulfide Isomerase (PDIa) family, redox
                     active TRX domains; composed of eukaryotic proteins
                     involved in oxidative protein folding in the endoplasmic
                     reticulum (ER) by acting as catalysts and folding
                     assistants. Members of this family include PDI...;
                     cd02961"
                     /db_xref="CDD:239259"
     Site            order(417,420)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239259"
     Region          531..720
                     /region_name="Thioredoxin_6"
                     /note="Thioredoxin-like domain; pfam13848"
                     /db_xref="CDD:463999"
     CDS             1..818
                     /gene="TXNDC16"
                     /coded_by="XM_061158065.1:723..3179"
                     /db_xref="GeneID:133066716"
ORIGIN      
        1 mmsssfsvfr agisfvmmci fytsavdspe lspqkffstl qpgkatlvyf sqaesprtam
       61 fleelneaak plqdygisva kvncvteets rycgsekdlm kaylfrgnia lrefptdtlf
      121 dvdaivahvl fallfnevky ittlgdlqni enalkgkgni afayvraigt pehravmeaa
      181 fvygtthqfv ltteialles igpedieyph lyffhckpvl dltqpcrril mkqslttlni
      241 hqfiktmeap lltevtgdpr qvstvhvqlg lplvfivgqq atyeadrtta ewvawrllgk
      301 agvllllrds levdipedtn vivrraeeea qmeflalshi dlivfhvest myieemskye
      361 dmedlnigiq ddeveetvyr drkrqlplel tvelteetfh atvtasdsiv lfyagwqavs
      421 maflqsyidv aiklkgtstm llarvncadw shvctkqnvt efpvvkmyke gqnpvsytgm
      481 lgteellkfi qlnriscpvn itsvqeaeey lngelykdli sysslsvlgl fsptmtrake
      541 efteagsylk gyvttgiyse edvlrlssky tvtlpallla rhkegkiesi plvnvrvqdi
      601 vqiitnasle tfpeitvenl piylrlqkpl lilfsdggid lqhektilml akkkyldslt
      661 pcwlnlkktp vgrgvlqayf gtlpplpllv vvnlhsdghv fafpsdqait eqnlllwlkk
      721 leagleshik vlpaqewkpp lpaydflsmm daaasehltr kdpeciketd vqesdkeqpd
      781 dksavteest etlkmkhssr sswfeeakkl lrhdnkel
//
LOCUS       XP_061014049             818 aa            linear   MAM 02-DEC-2023
DEFINITION  thioredoxin domain-containing protein 16 [Dama dama].
ACCESSION   XP_061014049
VERSION     XP_061014049.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158066.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..818
                     /product="thioredoxin domain-containing protein 16"
                     /calculated_mol_wt=92217
     Region          392..490
                     /region_name="PDI_a_family"
                     /note="Protein Disulfide Isomerase (PDIa) family, redox
                     active TRX domains; composed of eukaryotic proteins
                     involved in oxidative protein folding in the endoplasmic
                     reticulum (ER) by acting as catalysts and folding
                     assistants. Members of this family include PDI...;
                     cd02961"
                     /db_xref="CDD:239259"
     Site            order(417,420)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239259"
     Region          531..720
                     /region_name="Thioredoxin_6"
                     /note="Thioredoxin-like domain; pfam13848"
                     /db_xref="CDD:463999"
     CDS             1..818
                     /gene="TXNDC16"
                     /coded_by="XM_061158066.1:867..3323"
                     /db_xref="GeneID:133066716"
ORIGIN      
        1 mmsssfsvfr agisfvmmci fytsavdspe lspqkffstl qpgkatlvyf sqaesprtam
       61 fleelneaak plqdygisva kvncvteets rycgsekdlm kaylfrgnia lrefptdtlf
      121 dvdaivahvl fallfnevky ittlgdlqni enalkgkgni afayvraigt pehravmeaa
      181 fvygtthqfv ltteialles igpedieyph lyffhckpvl dltqpcrril mkqslttlni
      241 hqfiktmeap lltevtgdpr qvstvhvqlg lplvfivgqq atyeadrtta ewvawrllgk
      301 agvllllrds levdipedtn vivrraeeea qmeflalshi dlivfhvest myieemskye
      361 dmedlnigiq ddeveetvyr drkrqlplel tvelteetfh atvtasdsiv lfyagwqavs
      421 maflqsyidv aiklkgtstm llarvncadw shvctkqnvt efpvvkmyke gqnpvsytgm
      481 lgteellkfi qlnriscpvn itsvqeaeey lngelykdli sysslsvlgl fsptmtrake
      541 efteagsylk gyvttgiyse edvlrlssky tvtlpallla rhkegkiesi plvnvrvqdi
      601 vqiitnasle tfpeitvenl piylrlqkpl lilfsdggid lqhektilml akkkyldslt
      661 pcwlnlkktp vgrgvlqayf gtlpplpllv vvnlhsdghv fafpsdqait eqnlllwlkk
      721 leagleshik vlpaqewkpp lpaydflsmm daaasehltr kdpeciketd vqesdkeqpd
      781 dksavteest etlkmkhssr sswfeeakkl lrhdnkel
//
LOCUS       XP_061014051             818 aa            linear   MAM 02-DEC-2023
DEFINITION  thioredoxin domain-containing protein 16 [Dama dama].
ACCESSION   XP_061014051
VERSION     XP_061014051.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158068.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..818
                     /product="thioredoxin domain-containing protein 16"
                     /calculated_mol_wt=92217
     Region          392..490
                     /region_name="PDI_a_family"
                     /note="Protein Disulfide Isomerase (PDIa) family, redox
                     active TRX domains; composed of eukaryotic proteins
                     involved in oxidative protein folding in the endoplasmic
                     reticulum (ER) by acting as catalysts and folding
                     assistants. Members of this family include PDI...;
                     cd02961"
                     /db_xref="CDD:239259"
     Site            order(417,420)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239259"
     Region          531..720
                     /region_name="Thioredoxin_6"
                     /note="Thioredoxin-like domain; pfam13848"
                     /db_xref="CDD:463999"
     CDS             1..818
                     /gene="TXNDC16"
                     /coded_by="XM_061158068.1:525..2981"
                     /db_xref="GeneID:133066716"
ORIGIN      
        1 mmsssfsvfr agisfvmmci fytsavdspe lspqkffstl qpgkatlvyf sqaesprtam
       61 fleelneaak plqdygisva kvncvteets rycgsekdlm kaylfrgnia lrefptdtlf
      121 dvdaivahvl fallfnevky ittlgdlqni enalkgkgni afayvraigt pehravmeaa
      181 fvygtthqfv ltteialles igpedieyph lyffhckpvl dltqpcrril mkqslttlni
      241 hqfiktmeap lltevtgdpr qvstvhvqlg lplvfivgqq atyeadrtta ewvawrllgk
      301 agvllllrds levdipedtn vivrraeeea qmeflalshi dlivfhvest myieemskye
      361 dmedlnigiq ddeveetvyr drkrqlplel tvelteetfh atvtasdsiv lfyagwqavs
      421 maflqsyidv aiklkgtstm llarvncadw shvctkqnvt efpvvkmyke gqnpvsytgm
      481 lgteellkfi qlnriscpvn itsvqeaeey lngelykdli sysslsvlgl fsptmtrake
      541 efteagsylk gyvttgiyse edvlrlssky tvtlpallla rhkegkiesi plvnvrvqdi
      601 vqiitnasle tfpeitvenl piylrlqkpl lilfsdggid lqhektilml akkkyldslt
      661 pcwlnlkktp vgrgvlqayf gtlpplpllv vvnlhsdghv fafpsdqait eqnlllwlkk
      721 leagleshik vlpaqewkpp lpaydflsmm daaasehltr kdpeciketd vqesdkeqpd
      781 dksavteest etlkmkhssr sswfeeakkl lrhdnkel
//
LOCUS       XP_061014052             818 aa            linear   MAM 02-DEC-2023
DEFINITION  thioredoxin domain-containing protein 16 [Dama dama].
ACCESSION   XP_061014052
VERSION     XP_061014052.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158069.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..818
                     /product="thioredoxin domain-containing protein 16"
                     /calculated_mol_wt=92217
     Region          392..490
                     /region_name="PDI_a_family"
                     /note="Protein Disulfide Isomerase (PDIa) family, redox
                     active TRX domains; composed of eukaryotic proteins
                     involved in oxidative protein folding in the endoplasmic
                     reticulum (ER) by acting as catalysts and folding
                     assistants. Members of this family include PDI...;
                     cd02961"
                     /db_xref="CDD:239259"
     Site            order(417,420)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239259"
     Region          531..720
                     /region_name="Thioredoxin_6"
                     /note="Thioredoxin-like domain; pfam13848"
                     /db_xref="CDD:463999"
     CDS             1..818
                     /gene="TXNDC16"
                     /coded_by="XM_061158069.1:601..3057"
                     /db_xref="GeneID:133066716"
ORIGIN      
        1 mmsssfsvfr agisfvmmci fytsavdspe lspqkffstl qpgkatlvyf sqaesprtam
       61 fleelneaak plqdygisva kvncvteets rycgsekdlm kaylfrgnia lrefptdtlf
      121 dvdaivahvl fallfnevky ittlgdlqni enalkgkgni afayvraigt pehravmeaa
      181 fvygtthqfv ltteialles igpedieyph lyffhckpvl dltqpcrril mkqslttlni
      241 hqfiktmeap lltevtgdpr qvstvhvqlg lplvfivgqq atyeadrtta ewvawrllgk
      301 agvllllrds levdipedtn vivrraeeea qmeflalshi dlivfhvest myieemskye
      361 dmedlnigiq ddeveetvyr drkrqlplel tvelteetfh atvtasdsiv lfyagwqavs
      421 maflqsyidv aiklkgtstm llarvncadw shvctkqnvt efpvvkmyke gqnpvsytgm
      481 lgteellkfi qlnriscpvn itsvqeaeey lngelykdli sysslsvlgl fsptmtrake
      541 efteagsylk gyvttgiyse edvlrlssky tvtlpallla rhkegkiesi plvnvrvqdi
      601 vqiitnasle tfpeitvenl piylrlqkpl lilfsdggid lqhektilml akkkyldslt
      661 pcwlnlkktp vgrgvlqayf gtlpplpllv vvnlhsdghv fafpsdqait eqnlllwlkk
      721 leagleshik vlpaqewkpp lpaydflsmm daaasehltr kdpeciketd vqesdkeqpd
      781 dksavteest etlkmkhssr sswfeeakkl lrhdnkel
//
LOCUS       XP_061014053             818 aa            linear   MAM 02-DEC-2023
DEFINITION  thioredoxin domain-containing protein 16 [Dama dama].
ACCESSION   XP_061014053
VERSION     XP_061014053.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158070.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..818
                     /product="thioredoxin domain-containing protein 16"
                     /calculated_mol_wt=92217
     Region          392..490
                     /region_name="PDI_a_family"
                     /note="Protein Disulfide Isomerase (PDIa) family, redox
                     active TRX domains; composed of eukaryotic proteins
                     involved in oxidative protein folding in the endoplasmic
                     reticulum (ER) by acting as catalysts and folding
                     assistants. Members of this family include PDI...;
                     cd02961"
                     /db_xref="CDD:239259"
     Site            order(417,420)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239259"
     Region          531..720
                     /region_name="Thioredoxin_6"
                     /note="Thioredoxin-like domain; pfam13848"
                     /db_xref="CDD:463999"
     CDS             1..818
                     /gene="TXNDC16"
                     /coded_by="XM_061158070.1:567..3023"
                     /db_xref="GeneID:133066716"
ORIGIN      
        1 mmsssfsvfr agisfvmmci fytsavdspe lspqkffstl qpgkatlvyf sqaesprtam
       61 fleelneaak plqdygisva kvncvteets rycgsekdlm kaylfrgnia lrefptdtlf
      121 dvdaivahvl fallfnevky ittlgdlqni enalkgkgni afayvraigt pehravmeaa
      181 fvygtthqfv ltteialles igpedieyph lyffhckpvl dltqpcrril mkqslttlni
      241 hqfiktmeap lltevtgdpr qvstvhvqlg lplvfivgqq atyeadrtta ewvawrllgk
      301 agvllllrds levdipedtn vivrraeeea qmeflalshi dlivfhvest myieemskye
      361 dmedlnigiq ddeveetvyr drkrqlplel tvelteetfh atvtasdsiv lfyagwqavs
      421 maflqsyidv aiklkgtstm llarvncadw shvctkqnvt efpvvkmyke gqnpvsytgm
      481 lgteellkfi qlnriscpvn itsvqeaeey lngelykdli sysslsvlgl fsptmtrake
      541 efteagsylk gyvttgiyse edvlrlssky tvtlpallla rhkegkiesi plvnvrvqdi
      601 vqiitnasle tfpeitvenl piylrlqkpl lilfsdggid lqhektilml akkkyldslt
      661 pcwlnlkktp vgrgvlqayf gtlpplpllv vvnlhsdghv fafpsdqait eqnlllwlkk
      721 leagleshik vlpaqewkpp lpaydflsmm daaasehltr kdpeciketd vqesdkeqpd
      781 dksavteest etlkmkhssr sswfeeakkl lrhdnkel
//
LOCUS       XP_061014054             818 aa            linear   MAM 02-DEC-2023
DEFINITION  thioredoxin domain-containing protein 16 [Dama dama].
ACCESSION   XP_061014054
VERSION     XP_061014054.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158071.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..818
                     /product="thioredoxin domain-containing protein 16"
                     /calculated_mol_wt=92217
     Region          392..490
                     /region_name="PDI_a_family"
                     /note="Protein Disulfide Isomerase (PDIa) family, redox
                     active TRX domains; composed of eukaryotic proteins
                     involved in oxidative protein folding in the endoplasmic
                     reticulum (ER) by acting as catalysts and folding
                     assistants. Members of this family include PDI...;
                     cd02961"
                     /db_xref="CDD:239259"
     Site            order(417,420)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239259"
     Region          531..720
                     /region_name="Thioredoxin_6"
                     /note="Thioredoxin-like domain; pfam13848"
                     /db_xref="CDD:463999"
     CDS             1..818
                     /gene="TXNDC16"
                     /coded_by="XM_061158071.1:426..2882"
                     /db_xref="GeneID:133066716"
ORIGIN      
        1 mmsssfsvfr agisfvmmci fytsavdspe lspqkffstl qpgkatlvyf sqaesprtam
       61 fleelneaak plqdygisva kvncvteets rycgsekdlm kaylfrgnia lrefptdtlf
      121 dvdaivahvl fallfnevky ittlgdlqni enalkgkgni afayvraigt pehravmeaa
      181 fvygtthqfv ltteialles igpedieyph lyffhckpvl dltqpcrril mkqslttlni
      241 hqfiktmeap lltevtgdpr qvstvhvqlg lplvfivgqq atyeadrtta ewvawrllgk
      301 agvllllrds levdipedtn vivrraeeea qmeflalshi dlivfhvest myieemskye
      361 dmedlnigiq ddeveetvyr drkrqlplel tvelteetfh atvtasdsiv lfyagwqavs
      421 maflqsyidv aiklkgtstm llarvncadw shvctkqnvt efpvvkmyke gqnpvsytgm
      481 lgteellkfi qlnriscpvn itsvqeaeey lngelykdli sysslsvlgl fsptmtrake
      541 efteagsylk gyvttgiyse edvlrlssky tvtlpallla rhkegkiesi plvnvrvqdi
      601 vqiitnasle tfpeitvenl piylrlqkpl lilfsdggid lqhektilml akkkyldslt
      661 pcwlnlkktp vgrgvlqayf gtlpplpllv vvnlhsdghv fafpsdqait eqnlllwlkk
      721 leagleshik vlpaqewkpp lpaydflsmm daaasehltr kdpeciketd vqesdkeqpd
      781 dksavteest etlkmkhssr sswfeeakkl lrhdnkel
//
LOCUS       XP_061014055             818 aa            linear   MAM 02-DEC-2023
DEFINITION  thioredoxin domain-containing protein 16 [Dama dama].
ACCESSION   XP_061014055
VERSION     XP_061014055.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158072.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..818
                     /product="thioredoxin domain-containing protein 16"
                     /calculated_mol_wt=92217
     Region          392..490
                     /region_name="PDI_a_family"
                     /note="Protein Disulfide Isomerase (PDIa) family, redox
                     active TRX domains; composed of eukaryotic proteins
                     involved in oxidative protein folding in the endoplasmic
                     reticulum (ER) by acting as catalysts and folding
                     assistants. Members of this family include PDI...;
                     cd02961"
                     /db_xref="CDD:239259"
     Site            order(417,420)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239259"
     Region          531..720
                     /region_name="Thioredoxin_6"
                     /note="Thioredoxin-like domain; pfam13848"
                     /db_xref="CDD:463999"
     CDS             1..818
                     /gene="TXNDC16"
                     /coded_by="XM_061158072.1:323..2779"
                     /db_xref="GeneID:133066716"
ORIGIN      
        1 mmsssfsvfr agisfvmmci fytsavdspe lspqkffstl qpgkatlvyf sqaesprtam
       61 fleelneaak plqdygisva kvncvteets rycgsekdlm kaylfrgnia lrefptdtlf
      121 dvdaivahvl fallfnevky ittlgdlqni enalkgkgni afayvraigt pehravmeaa
      181 fvygtthqfv ltteialles igpedieyph lyffhckpvl dltqpcrril mkqslttlni
      241 hqfiktmeap lltevtgdpr qvstvhvqlg lplvfivgqq atyeadrtta ewvawrllgk
      301 agvllllrds levdipedtn vivrraeeea qmeflalshi dlivfhvest myieemskye
      361 dmedlnigiq ddeveetvyr drkrqlplel tvelteetfh atvtasdsiv lfyagwqavs
      421 maflqsyidv aiklkgtstm llarvncadw shvctkqnvt efpvvkmyke gqnpvsytgm
      481 lgteellkfi qlnriscpvn itsvqeaeey lngelykdli sysslsvlgl fsptmtrake
      541 efteagsylk gyvttgiyse edvlrlssky tvtlpallla rhkegkiesi plvnvrvqdi
      601 vqiitnasle tfpeitvenl piylrlqkpl lilfsdggid lqhektilml akkkyldslt
      661 pcwlnlkktp vgrgvlqayf gtlpplpllv vvnlhsdghv fafpsdqait eqnlllwlkk
      721 leagleshik vlpaqewkpp lpaydflsmm daaasehltr kdpeciketd vqesdkeqpd
      781 dksavteest etlkmkhssr sswfeeakkl lrhdnkel
//
LOCUS       XP_061014056             818 aa            linear   MAM 02-DEC-2023
DEFINITION  thioredoxin domain-containing protein 16 [Dama dama].
ACCESSION   XP_061014056
VERSION     XP_061014056.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158073.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..818
                     /product="thioredoxin domain-containing protein 16"
                     /calculated_mol_wt=92217
     Region          392..490
                     /region_name="PDI_a_family"
                     /note="Protein Disulfide Isomerase (PDIa) family, redox
                     active TRX domains; composed of eukaryotic proteins
                     involved in oxidative protein folding in the endoplasmic
                     reticulum (ER) by acting as catalysts and folding
                     assistants. Members of this family include PDI...;
                     cd02961"
                     /db_xref="CDD:239259"
     Site            order(417,420)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239259"
     Region          531..720
                     /region_name="Thioredoxin_6"
                     /note="Thioredoxin-like domain; pfam13848"
                     /db_xref="CDD:463999"
     CDS             1..818
                     /gene="TXNDC16"
                     /coded_by="XM_061158073.1:445..2901"
                     /db_xref="GeneID:133066716"
ORIGIN      
        1 mmsssfsvfr agisfvmmci fytsavdspe lspqkffstl qpgkatlvyf sqaesprtam
       61 fleelneaak plqdygisva kvncvteets rycgsekdlm kaylfrgnia lrefptdtlf
      121 dvdaivahvl fallfnevky ittlgdlqni enalkgkgni afayvraigt pehravmeaa
      181 fvygtthqfv ltteialles igpedieyph lyffhckpvl dltqpcrril mkqslttlni
      241 hqfiktmeap lltevtgdpr qvstvhvqlg lplvfivgqq atyeadrtta ewvawrllgk
      301 agvllllrds levdipedtn vivrraeeea qmeflalshi dlivfhvest myieemskye
      361 dmedlnigiq ddeveetvyr drkrqlplel tvelteetfh atvtasdsiv lfyagwqavs
      421 maflqsyidv aiklkgtstm llarvncadw shvctkqnvt efpvvkmyke gqnpvsytgm
      481 lgteellkfi qlnriscpvn itsvqeaeey lngelykdli sysslsvlgl fsptmtrake
      541 efteagsylk gyvttgiyse edvlrlssky tvtlpallla rhkegkiesi plvnvrvqdi
      601 vqiitnasle tfpeitvenl piylrlqkpl lilfsdggid lqhektilml akkkyldslt
      661 pcwlnlkktp vgrgvlqayf gtlpplpllv vvnlhsdghv fafpsdqait eqnlllwlkk
      721 leagleshik vlpaqewkpp lpaydflsmm daaasehltr kdpeciketd vqesdkeqpd
      781 dksavteest etlkmkhssr sswfeeakkl lrhdnkel
//
LOCUS       XP_061014057             468 aa            linear   MAM 02-DEC-2023
DEFINITION  ERO1-like protein alpha isoform X1 [Dama dama].
ACCESSION   XP_061014057
VERSION     XP_061014057.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158074.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..468
                     /product="ERO1-like protein alpha isoform X1"
                     /calculated_mol_wt=54095
     Region          60..457
                     /region_name="ERO1"
                     /note="Endoplasmic Reticulum Oxidoreductin 1 (ERO1);
                     pfam04137"
                     /db_xref="CDD:461191"
     CDS             1..468
                     /gene="ERO1A"
                     /coded_by="XM_061158074.1:139..1545"
                     /db_xref="GeneID:133066717"
ORIGIN      
        1 mgrrwgflig flvavgllgs ghgeqqppet aaqrcfcqvs gylddctcdv etidkfnnyr
       61 lfprlqklle sdyfryykvn lkrpcpfwnd isqcgrrdca vkpchsdevp dgiksasyky
      121 seeannliee ceqaerlgav deslseetqk avlqwtkhdd ssdnfceadd iqspdaeyvd
      181 lllnperytg ykgpdawkiw nviyeencfk pqtikrplnp lasgqgksee ntfyswlegl
      241 cvekrafyrl isglhasinv hlsaryllqd twlekkwghn itefqqrfdg iltegegprr
      301 lknlyflyli elralskvvp fferpdfqlf tgnkdqdaen kmllleilhe iksfplhfde
      361 nsffagnkke anklkedfrl hfrnisrimd cvgclkcrlw gklqtqglgt alkilfsekl
      421 ianmpesgps yefhltrqei vslfnafgri stsvkelenf rnllqnih
//
LOCUS       XP_061014058             464 aa            linear   MAM 02-DEC-2023
DEFINITION  ERO1-like protein alpha isoform X2 [Dama dama].
ACCESSION   XP_061014058
VERSION     XP_061014058.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158075.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..464
                     /product="ERO1-like protein alpha isoform X2"
                     /calculated_mol_wt=53693
     Region          60..453
                     /region_name="ERO1"
                     /note="Endoplasmic Reticulum Oxidoreductin 1 (ERO1);
                     pfam04137"
                     /db_xref="CDD:461191"
     CDS             1..464
                     /gene="ERO1A"
                     /coded_by="XM_061158075.1:139..1533"
                     /db_xref="GeneID:133066717"
ORIGIN      
        1 mgrrwgflig flvavgllgs ghgeqqppet aaqrcfcqvs gylddctcdv etidkfnnyr
       61 lfprlqklle sdyfryykvn lkrpcpfwnd isqcgrrdca vkpchsdevp dgiksasyky
      121 seeannliee ceqaerlgav deslseetqk avlqwtkhdd ssdnfceadd iqspdaeyvd
      181 lllnperytg ykgpdawkiw nviyeencfk pqtikrplnp lasgqentfy swleglcvek
      241 rafyrlisgl hasinvhlsa ryllqdtwle kkwghnitef qqrfdgilte gegprrlknl
      301 yflylielra lskvvpffer pdfqlftgnk dqdaenkmll leilheiksf plhfdensff
      361 agnkkeankl kedfrlhfrn isrimdcvgc lkcrlwgklq tqglgtalki lfseklianm
      421 pesgpsyefh ltrqeivslf nafgristsv kelenfrnll qnih
//
LOCUS       XP_061014059             421 aa            linear   MAM 02-DEC-2023
DEFINITION  integral membrane protein GPR137C [Dama dama].
ACCESSION   XP_061014059
VERSION     XP_061014059.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158076.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..421
                     /product="integral membrane protein GPR137C"
                     /calculated_mol_wt=46168
     Region          36..355
                     /region_name="7tm_GPR137C"
                     /note="Integral membrane protein GPR137C, an orphan
                     receptor member of the seven-transmembrane G
                     protein-coupled receptor superfamily; cd21475"
                     /db_xref="CDD:410552"
     Region          42..64
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410552"
     Region          76..96
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410552"
     Region          117..139
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410552"
     Region          158..180
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410552"
     Region          197..219
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410552"
     Region          240..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410552"
     Region          292..314
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410552"
     CDS             1..421
                     /gene="GPR137C"
                     /coded_by="XM_061158076.1:1..1266"
                     /db_xref="GeneID:133066719"
ORIGIN      
        1 mrasvpgpaa grepstpggg ggdavaaasg aavpgsvqla lsilhallya alfafaylql
       61 wrlllyrgrr lsyqslclfl cllwaalrtt lfsaafslsg slpllrppah lhffphwlly
      121 cfpsclqfst lcllnlylae vickvrcate ldkhkillhl gfilasllfl vvnltcamlv
      181 hgdvpenqlk wtvfvralin dslfilcais lvsyickitk mssanvyles kgmslcqtvv
      241 vgsvvillys sracynlvvi tisqdtlesp fnygwdnlsd kahvkdvsge eyivfgmvlf
      301 lwehvpawsv vlffraqrln qnlapagmin shsyssrayf fdnprrydsd ddlprlgssr
      361 egslsnsqgl gwygtmtgcg gssytvsphl hgpltdtapl lftcsnldmn shhslyvtpq
      421 n
//
LOCUS       XP_061014060             143 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133066720 [Dama dama].
ACCESSION   XP_061014060
VERSION     XP_061014060.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158077.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..143
                     /product="uncharacterized protein LOC133066720"
                     /calculated_mol_wt=15219
     CDS             1..143
                     /gene="LOC133066720"
                     /coded_by="XM_061158077.1:55..486"
                     /db_xref="GeneID:133066720"
ORIGIN      
        1 mkparasprp rptsrppprp alvspssqkp pplvaacgra gaparaawdl rpasfparva
       61 daptlsptpp spesrarprp esperpglgy ptrlrppapr gsrgppsses psqrwrglcl
      121 pvqrvltmpk pltvwitinc gkf
//
LOCUS       XP_061014062             403 aa            linear   MAM 02-DEC-2023
DEFINITION  26S proteasome regulatory subunit 10B isoform X1 [Dama dama].
ACCESSION   XP_061014062
VERSION     XP_061014062.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158079.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..403
                     /product="26S proteasome regulatory subunit 10B isoform
                     X1"
                     /calculated_mol_wt=45666
     Region          19..393
                     /region_name="PRK03992"
                     /note="proteasome-activating nucleotidase; Provisional"
                     /db_xref="CDD:179699"
     CDS             1..403
                     /gene="PSMC6"
                     /coded_by="XM_061158079.1:30..1241"
                     /db_xref="GeneID:133066721"
ORIGIN      
        1 maipgipyer rllimadprd kalqdyrkkl lehkeidgrl kelreqlkel tkqyeksend
       61 lkalqsvgqi vgevlkqlte ekfivkatng pryvvgcrrq ldksklkpgt rvaldmttlt
      121 imrylprevd plvynmshed pgnvsyseig glseqirelr evielpltnp elfqrvgiip
      181 pkgcllygpp gtgktllara vasqldcnfl kvvsssivdk yigesarlir emfnyardhq
      241 pciifmdeid aiggrrfseg tsadreiqrt lmellnqmdg fdtlhrvkmi matnrpdtld
      301 pallrpgrld rkihidlpne qarldilkih agpitkhgei dyeaivklsd gfngadlrnv
      361 cteagmfair adhdfvvqed fmkavrkvad skkleskldy kpv
//
LOCUS       XP_061014063             376 aa            linear   MAM 02-DEC-2023
DEFINITION  26S proteasome regulatory subunit 10B isoform X2 [Dama dama].
ACCESSION   XP_061014063
VERSION     XP_061014063.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158080.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..376
                     /product="26S proteasome regulatory subunit 10B isoform
                     X2"
                     /calculated_mol_wt=42556
     Region          19..364
                     /region_name="PRK03992"
                     /note="proteasome-activating nucleotidase; Provisional"
                     /db_xref="CDD:179699"
     CDS             1..376
                     /gene="PSMC6"
                     /coded_by="XM_061158080.1:30..1160"
                     /db_xref="GeneID:133066721"
ORIGIN      
        1 maipgipyer rllimadprd kalqdyrkkl lehkeidgrl kelreqlkel tkqyeksend
       61 lkalqsvgqi vgevlkqlte ekfivkatng pryvvgcrrq ldksklkpgt rvaldmttlt
      121 imrylprevd plvynmshed pgnvsyseig glseqirelr evielpltnp elfqrvgiip
      181 pkgcllygpp gtgktllara vasqldcnfl kvvsssivdk yigesarlir emfnyardhq
      241 pciifmdeid aiggrrfseg tsadreiqrt lmellnqmdg fdtlhrvkmi matnrpdtld
      301 pallrpgrld rkihidlpne qarldilkih agpitkhgei dyeaivklsd gfngadlrnv
      361 cteadaigyr dcmsws
//
LOCUS       XP_061014064             223 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine/tyrosine-interacting protein [Dama dama].
ACCESSION   XP_061014064
VERSION     XP_061014064.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158081.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..223
                     /product="serine/threonine/tyrosine-interacting protein"
                     /calculated_mol_wt=25358
     Region          25..175
                     /region_name="DSP_STYX"
                     /note="dual specificity phosphatase-like domain of
                     serine/threonine/tyrosine-interacting protein; cd14522"
                     /db_xref="CDD:350372"
     CDS             1..223
                     /gene="STYX"
                     /coded_by="XM_061158081.1:292..963"
                     /db_xref="GeneID:133066722"
ORIGIN      
        1 medvklefps lpqckedaee wtypmrremq eilpglflgp yssamksklp ilqkhgithv
       61 icirqniean fikpnfqqlf rylvldiadn pveniirffp mtkefidesl qsggkvlvhg
      121 nagisrsaaf viayimetfg mkyrdafayv qerrfcinpn agfvhqlqey eaiylaklti
      181 qmmsplqier slsvhsgstg slkrtheeed dfgnmqvaaa qng
//
LOCUS       XP_061014065             184 aa            linear   MAM 02-DEC-2023
DEFINITION  glucosamine 6-phosphate N-acetyltransferase [Dama dama].
ACCESSION   XP_061014065
VERSION     XP_061014065.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158082.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..184
                     /product="glucosamine 6-phosphate N-acetyltransferase"
                     /calculated_mol_wt=20617
     Region          36..174
                     /region_name="N-Acyltransferase superfamily: Various
                     enyzmes that characteristicly catalyze the transfer of an
                     acyl group to a substrate"
                     /note="NAT (N-Acyltransferase) is a large superfamily of
                     enzymes that mostly catalyze the transfer of an acyl group
                     to a substrate and are implicated in a variety of
                     functions, from bacterial antibiotic resistance to
                     circadian rhythms in mammals. Members...; cl17182"
                     /db_xref="CDD:473072"
     CDS             1..184
                     /gene="GNPNAT1"
                     /coded_by="XM_061158082.1:167..721"
                     /db_xref="GeneID:133066723"
ORIGIN      
        1 mkpdetpmfd psllkevdws qntatfspai spthpgeglv lrplctadln rgffkvlgql
       61 tetgavnpeq fmksfehmkk sgdyyvtvve dvtlgqivat atliiehkfi hscakrgrve
      121 dvvvsdecrg kqlgklllst ltllskklnc ykitleclpq nvgfykkfgy tvseenymcr
      181 rflk
//
LOCUS       XP_061014066             184 aa            linear   MAM 02-DEC-2023
DEFINITION  glucosamine 6-phosphate N-acetyltransferase [Dama dama].
ACCESSION   XP_061014066
VERSION     XP_061014066.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158083.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..184
                     /product="glucosamine 6-phosphate N-acetyltransferase"
                     /calculated_mol_wt=20617
     Region          36..174
                     /region_name="N-Acyltransferase superfamily: Various
                     enyzmes that characteristicly catalyze the transfer of an
                     acyl group to a substrate"
                     /note="NAT (N-Acyltransferase) is a large superfamily of
                     enzymes that mostly catalyze the transfer of an acyl group
                     to a substrate and are implicated in a variety of
                     functions, from bacterial antibiotic resistance to
                     circadian rhythms in mammals. Members...; cl17182"
                     /db_xref="CDD:473072"
     CDS             1..184
                     /gene="GNPNAT1"
                     /coded_by="XM_061158083.1:173..727"
                     /db_xref="GeneID:133066723"
ORIGIN      
        1 mkpdetpmfd psllkevdws qntatfspai spthpgeglv lrplctadln rgffkvlgql
       61 tetgavnpeq fmksfehmkk sgdyyvtvve dvtlgqivat atliiehkfi hscakrgrve
      121 dvvvsdecrg kqlgklllst ltllskklnc ykitleclpq nvgfykkfgy tvseenymcr
      181 rflk
//
LOCUS       XP_061014067             184 aa            linear   MAM 02-DEC-2023
DEFINITION  glucosamine 6-phosphate N-acetyltransferase [Dama dama].
ACCESSION   XP_061014067
VERSION     XP_061014067.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158084.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..184
                     /product="glucosamine 6-phosphate N-acetyltransferase"
                     /calculated_mol_wt=20617
     Region          36..174
                     /region_name="N-Acyltransferase superfamily: Various
                     enyzmes that characteristicly catalyze the transfer of an
                     acyl group to a substrate"
                     /note="NAT (N-Acyltransferase) is a large superfamily of
                     enzymes that mostly catalyze the transfer of an acyl group
                     to a substrate and are implicated in a variety of
                     functions, from bacterial antibiotic resistance to
                     circadian rhythms in mammals. Members...; cl17182"
                     /db_xref="CDD:473072"
     CDS             1..184
                     /gene="GNPNAT1"
                     /coded_by="XM_061158084.1:35..589"
                     /db_xref="GeneID:133066723"
ORIGIN      
        1 mkpdetpmfd psllkevdws qntatfspai spthpgeglv lrplctadln rgffkvlgql
       61 tetgavnpeq fmksfehmkk sgdyyvtvve dvtlgqivat atliiehkfi hscakrgrve
      121 dvvvsdecrg kqlgklllst ltllskklnc ykitleclpq nvgfykkfgy tvseenymcr
      181 rflk
//
LOCUS       XP_061014068             459 aa            linear   MAM 02-DEC-2023
DEFINITION  serine incorporator 5 [Dama dama].
ACCESSION   XP_061014068
VERSION     XP_061014068.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158085.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..459
                     /product="serine incorporator 5"
                     /calculated_mol_wt=51053
     Region          11..453
                     /region_name="Serinc"
                     /note="Serine incorporator (Serinc); pfam03348"
                     /db_xref="CDD:460891"
     CDS             1..459
                     /gene="SERINC5"
                     /coded_by="XM_061158085.1:152..1531"
                     /db_xref="GeneID:133066725"
ORIGIN      
        1 msarccagql acccgnagcs yccgpkvrqs rstrfmyaly filvviicci mmsntvanem
       61 rehipyfedi ckgikagdtc eklvgysavy rvcfgmacff flfclltlnv nnskscrayi
      121 hngfwffkll llgamcsgaf fipdqetfln awryvgavgg flfiviqlll lvefahkwnk
      181 nwtagtatnk lwyaslslvt lvaysittgg liwmavfytq kdgclenkil lgvngglcll
      241 msvvsispsv rdrqphsgil qsgliscyvt yltfsalssk paevvldehg knvticvpnf
      301 gqdlyrdktl vaglgtailc vcilysclts ttrsssdalq grytapelev arccfcfgsg
      361 gedaeekrnm kegprviyde kkgtvysyay fhfmfflasl yvmmtvtnwf nyesanietf
      421 fsgswsifwv kmascwicvl lylgtlvapl crpspqysv
//
LOCUS       XP_061014069             961 aa            linear   MAM 02-DEC-2023
DEFINITION  thrombospondin-4 [Dama dama].
ACCESSION   XP_061014069
VERSION     XP_061014069.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158086.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..961
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..961
                     /product="thrombospondin-4"
                     /calculated_mol_wt=105873
     Region          24..192
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cl22861"
                     /db_xref="CDD:473984"
     Region          219..262
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:293926"
     Region          219..262
                     /region_name="TSP-4cc"
                     /note="Coiled coil region of thrombospondin-4 (TSP-4);
                     cd16080"
                     /db_xref="CDD:293926"
     Site            order(219..224,226..231,234,236..238,240..242,244..245,
                     247..252,254..256,258..261)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293926"
     Site            order(230,241,244)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:293926"
     Region          290..320
                     /region_name="EGF"
                     /note="EGF-like domain; pfam00008"
                     /db_xref="CDD:394967"
     Region          326..360
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(326,329,343)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          379..413
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(379,382,396)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          <464..696
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     Region          496..531
                     /region_name="TSP_3"
                     /note="Thrombospondin type 3 repeat; pfam02412"
                     /db_xref="CDD:367074"
     Region          496..531
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275366"
     Region          532..554
                     /region_name="TSP3 repeat_short"
                     /note="TSP3 repeat_short [structural motif]"
                     /db_xref="CDD:275366"
     Region          555..590
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275365"
     Region          591..613
                     /region_name="TSP3 repeat_short"
                     /note="TSP3 repeat_short [structural motif]"
                     /db_xref="CDD:275365"
     Region          614..651
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275365"
     Region          615..651
                     /region_name="TSP_3"
                     /note="Thrombospondin type 3 repeat; pfam02412"
                     /db_xref="CDD:367074"
     Region          652..691
                     /region_name="TSP3 repeat_short"
                     /note="TSP3 repeat_short [structural motif]"
                     /db_xref="CDD:275366"
     Region          692..726
                     /region_name="TSP_3"
                     /note="Thrombospondin type 3 repeat; pfam02412"
                     /db_xref="CDD:367074"
     Region          692..723
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275365"
     Region          745..942
                     /region_name="TSP_C"
                     /note="Thrombospondin C-terminal region; pfam05735"
                     /db_xref="CDD:461725"
     CDS             1..961
                     /gene="THBS4"
                     /coded_by="XM_061158086.1:59..2944"
                     /db_xref="GeneID:133066730"
ORIGIN      
        1 mlaprgatvl llhlalqpwl gagaqatpqv fdllpsasqr lnpsvlqpil tdptlnelyv
       61 istfklqsks satifglyss adhskyfeft vmgrlnkavl rylkndgrih lvvfnnlqla
      121 dgrrhrlllr ltnlhrgags velfldctrv dsihnlpraf sglaqspeav elrtfqrkah
      181 dsleelklvv rgsliqvasl qdcflqqsep lattntgdfn rqflgqmsql nqllgevkdl
      241 lrqqvketsf lrntiaecqa cgplsfqspt pntlvpvvpa asptppvrrc dsnpcfrgvr
      301 ctdtrdgfqc gpcpegytgn giacsdvdec kyhpcypgvr cvnlapgfrc dacpvgftgp
      361 mmqgvginfa ktnkqvctdi decrngacvl nsicintlgs yrcgpckpgy igdqmrgckm
      421 erncrdpeln pcsvnaqcie erqgdvtcvc gvgwagdgyi cgkdvdidsy pdeelpcsar
      481 nckkdnckyv pnsgqedadr dgigdacded adgdgilneq dncvlthnvd qrnsdkdifg
      541 dacdncrnvl nndqkdtdgd gkgdacdddm dgdgiknild ncqkvpnrdq edrdgdgvgd
      601 acdscpevsn pnqsdvdndl vgdscdtnqd sdgdghqdst dncptvinsa qldtdkdgig
      661 decdddddnd gipdlvppgp dncrlvpnpa qedrnsdgvg diceadfdqd qvidridvcp
      721 enaevtltdf rayqtvvldp egdaqidpnw vvlnqgmeiv qtmnsdpgla vgytafngvd
      781 fegtfhvntq tdddyagfif gyqdsssfyv vmwkqteqty wqatpfrava epgiqlkavk
      841 sktgpgehlr nslwhtgdts dqvrllwkds rnvgwkdkvs yrwflqhrpq vgyirvrfye
      901 gselvadsgv tidttmrggr lgvfcfsqen iiwsnlkyrc ndtipedfqe fqtqnfdrld
      961 k
//
LOCUS       XP_061014071             312 aa            linear   MAM 02-DEC-2023
DEFINITION  metaxin-3 isoform X1 [Dama dama].
ACCESSION   XP_061014071
VERSION     XP_061014071.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158088.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..312
                     /product="metaxin-3 isoform X1"
                     /calculated_mol_wt=34961
     Region          23..142
                     /region_name="Tom37"
                     /note="Outer mitochondrial membrane transport complex
                     protein; pfam10568"
                     /db_xref="CDD:463150"
     Region          105..241
                     /region_name="GST_C_Metaxin1_3"
                     /note="C-terminal, alpha helical domain of Metaxin 1,
                     Metaxin 3, and similar proteins; cd03212"
                     /db_xref="CDD:198321"
     Site            order(111,118,197,200..201,204,208)
                     /site_type="other"
                     /note="putative N-terminal domain interface [polypeptide
                     binding]"
                     /db_xref="CDD:198321"
     CDS             1..312
                     /gene="MTX3"
                     /coded_by="XM_061158088.1:15..953"
                     /db_xref="GeneID:133066732"
ORIGIN      
        1 maaplelscw gggwglpsvh sdslvvmaya kfsgaplkvn vidntwrgsr gevpvltted
       61 ntisqpakil nflrkqkyna dyelsakqga dtlayialle ekllpavlht fwvesdnyft
      121 vtkpwfasrm pfplslilpg rmskgaldri lltrgepply hlreveaqiy rdakeclnll
      181 snrlgtsqff fgdmpstlda yvfgflaply kvrfpkvqlq ehlkqlsnlc rfcddilnsy
      241 frvslggisp agqetvdanl qkltqlvnke snliekmddn lrqspqlppr klptlkltpa
      301 eeesnslqrl sp
//
LOCUS       XP_061014072             281 aa            linear   MAM 02-DEC-2023
DEFINITION  metaxin-3 isoform X2 [Dama dama].
ACCESSION   XP_061014072
VERSION     XP_061014072.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158089.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..281
                     /product="metaxin-3 isoform X2"
                     /calculated_mol_wt=31568
     Region          5..76
                     /region_name="GST_N_Metaxin1_like"
                     /note="GST_N family, Metaxin subfamily, Metaxin 1-like
                     proteins; composed of metaxins 1 and 3, and similar
                     proteins including Tom37 from fungi. Mammalian metaxin (or
                     metaxin 1) and the fungal protein Tom37 are components of
                     preprotein import complexes of the...; cd03078"
                     /db_xref="CDD:239376"
     Site            order(22,24..25,27..28,31..32,67,70..71)
                     /site_type="other"
                     /note="putative C-terminal domain interface [polypeptide
                     binding]"
                     /db_xref="CDD:239376"
     Site            order(22,52..54,65..66)
                     /site_type="other"
                     /note="putative GSH binding site [chemical binding]"
                     /db_xref="CDD:239376"
     Site            order(52,64..65,67..68,71)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:239376"
     Region          77..210
                     /region_name="GST_C_Metaxin1_3"
                     /note="C-terminal, alpha helical domain of Metaxin 1,
                     Metaxin 3, and similar proteins; cd03212"
                     /db_xref="CDD:198321"
     Site            order(80,87,166,169..170,173,177)
                     /site_type="other"
                     /note="putative N-terminal domain interface [polypeptide
                     binding]"
                     /db_xref="CDD:198321"
     CDS             1..281
                     /gene="MTX3"
                     /coded_by="XM_061158089.1:15..860"
                     /db_xref="GeneID:133066732"
ORIGIN      
        1 maaplelscw gggwglpsvh sdslvvmaya kfsgaplkvn vidntwrgsr gevpvltted
       61 ntisqpakil nflrkqlhtf wvesdnyftv tkpwfasrmp fplslilpgr mskgaldril
      121 ltrgepplyh lreveaqiyr dakeclnlls nrlgtsqfff gdmpstlday vfgflaplyk
      181 vrfpkvqlqe hlkqlsnlcr fcddilnsyf rvslggispa gqetvdanlq kltqlvnkes
      241 nliekmddnl rqspqlpprk lptlkltpae eesnslqrls p
//
LOCUS       XP_061014073             270 aa            linear   MAM 02-DEC-2023
DEFINITION  metaxin-3 isoform X3 [Dama dama].
ACCESSION   XP_061014073
VERSION     XP_061014073.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158090.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..270
                     /product="metaxin-3 isoform X3"
                     /calculated_mol_wt=30362
     Region          23..142
                     /region_name="Tom37"
                     /note="Outer mitochondrial membrane transport complex
                     protein; pfam10568"
                     /db_xref="CDD:463150"
     Region          105..241
                     /region_name="GST_C_Metaxin1_3"
                     /note="C-terminal, alpha helical domain of Metaxin 1,
                     Metaxin 3, and similar proteins; cd03212"
                     /db_xref="CDD:198321"
     Site            order(111,118,197,200..201,204,208)
                     /site_type="other"
                     /note="putative N-terminal domain interface [polypeptide
                     binding]"
                     /db_xref="CDD:198321"
     CDS             1..270
                     /gene="MTX3"
                     /coded_by="XM_061158090.1:15..827"
                     /db_xref="GeneID:133066732"
ORIGIN      
        1 maaplelscw gggwglpsvh sdslvvmaya kfsgaplkvn vidntwrgsr gevpvltted
       61 ntisqpakil nflrkqkyna dyelsakqga dtlayialle ekllpavlht fwvesdnyft
      121 vtkpwfasrm pfplslilpg rmskgaldri lltrgepply hlreveaqiy rdakeclnll
      181 snrlgtsqff fgdmpstlda yvfgflaply kvrfpkvqlq ehlkqlsnlc rfcddilnsy
      241 frvslgafsc vnrneqqidf gevhshdstt
//
LOCUS       XP_061014074             270 aa            linear   MAM 02-DEC-2023
DEFINITION  metaxin-3 isoform X3 [Dama dama].
ACCESSION   XP_061014074
VERSION     XP_061014074.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158091.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..270
                     /product="metaxin-3 isoform X3"
                     /calculated_mol_wt=30362
     Region          23..142
                     /region_name="Tom37"
                     /note="Outer mitochondrial membrane transport complex
                     protein; pfam10568"
                     /db_xref="CDD:463150"
     Region          105..241
                     /region_name="GST_C_Metaxin1_3"
                     /note="C-terminal, alpha helical domain of Metaxin 1,
                     Metaxin 3, and similar proteins; cd03212"
                     /db_xref="CDD:198321"
     Site            order(111,118,197,200..201,204,208)
                     /site_type="other"
                     /note="putative N-terminal domain interface [polypeptide
                     binding]"
                     /db_xref="CDD:198321"
     CDS             1..270
                     /gene="MTX3"
                     /coded_by="XM_061158091.1:15..827"
                     /db_xref="GeneID:133066732"
ORIGIN      
        1 maaplelscw gggwglpsvh sdslvvmaya kfsgaplkvn vidntwrgsr gevpvltted
       61 ntisqpakil nflrkqkyna dyelsakqga dtlayialle ekllpavlht fwvesdnyft
      121 vtkpwfasrm pfplslilpg rmskgaldri lltrgepply hlreveaqiy rdakeclnll
      181 snrlgtsqff fgdmpstlda yvfgflaply kvrfpkvqlq ehlkqlsnlc rfcddilnsy
      241 frvslgafsc vnrneqqidf gevhshdstt
//
LOCUS       XP_061014075             248 aa            linear   MAM 02-DEC-2023
DEFINITION  metaxin-3 isoform X4 [Dama dama].
ACCESSION   XP_061014075
VERSION     XP_061014075.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158092.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..248
                     /product="metaxin-3 isoform X4"
                     /calculated_mol_wt=27830
     Region          23..142
                     /region_name="Tom37"
                     /note="Outer mitochondrial membrane transport complex
                     protein; pfam10568"
                     /db_xref="CDD:463150"
     Region          105..241
                     /region_name="GST_C_Metaxin1_3"
                     /note="C-terminal, alpha helical domain of Metaxin 1,
                     Metaxin 3, and similar proteins; cd03212"
                     /db_xref="CDD:198321"
     Site            order(111,118,197,200..201,204,208)
                     /site_type="other"
                     /note="putative N-terminal domain interface [polypeptide
                     binding]"
                     /db_xref="CDD:198321"
     CDS             1..248
                     /gene="MTX3"
                     /coded_by="XM_061158092.1:15..761"
                     /db_xref="GeneID:133066732"
ORIGIN      
        1 maaplelscw gggwglpsvh sdslvvmaya kfsgaplkvn vidntwrgsr gevpvltted
       61 ntisqpakil nflrkqkyna dyelsakqga dtlayialle ekllpavlht fwvesdnyft
      121 vtkpwfasrm pfplslilpg rmskgaldri lltrgepply hlreveaqiy rdakeclnll
      181 snrlgtsqff fgdmpstlda yvfgflaply kvrfpkvqlq ehlkqlsnlc rfcddilnsy
      241 frvslgdg
//
LOCUS       XP_061014076             323 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: mortality factor 4-like protein 1 [Dama dama].
ACCESSION   XP_061014076
VERSION     XP_061014076.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158093.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..323
                     /product="LOW QUALITY PROTEIN: mortality factor 4-like
                     protein 1"
                     /calculated_mol_wt=37055
     Region          15..71
                     /region_name="CBD_MSL3_like"
                     /note="chromo barrel domain of human male-specific lethal
                     complex subunit 3, and similar proteins; cd18983"
                     /db_xref="CDD:350846"
     Site            order(21..22,26..29,44,46..49,53,55..58,60..62,65..66)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:350846"
     Site            order(26,46,49,53)
                     /site_type="other"
                     /note="putative methylated histone tail binding site
                     [chemical binding]"
                     /db_xref="CDD:350846"
     Site            order(43,45..50,52..56)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350846"
     Site            order(43,46,50,52,56)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:350846"
     Region          137..312
                     /region_name="MRG"
                     /note="pfam05712"
                     /db_xref="CDD:461721"
     CDS             1..323
                     /gene="LOC133066733"
                     /coded_by="XM_061158093.1:44..1015"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /db_xref="GeneID:133066733"
ORIGIN      
        1 malkqdpkpk fqegervlcf hgpllyeakc vkvaikdkqv kyfihysgwn knwdewvpes
       61 rvlkyvdtnl qkqrelqkan qeqyaegkmr gaapgkktgg lqqknievkt kknkqktpgn
      121 gdggstsetp qpprkkrarv dptveneetf msrvevkvki peelkpwlvd dwdlitrqkq
      181 lfylpakknv dsiledyany kksrgntdnk eyavnevvag ikeyfnvmlg tqllykferp
      241 qyaeiladhp dapmsqvyga phllrlfvri gsmlaytpld ekslalllny lhdflkylak
      301 nsatllsasd yevappeyhr kav
//
LOCUS       XP_061014077            3987 aa            linear   MAM 02-DEC-2023
DEFINITION  cardiomyopathy-associated protein 5 [Dama dama].
ACCESSION   XP_061014077
VERSION     XP_061014077.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158094.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3987
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3987
                     /product="cardiomyopathy-associated protein 5"
                     /calculated_mol_wt=440196
     Region          <1932..2335
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          3420..3456
                     /region_name="Bbox_SF"
                     /note="B-box-type zinc finger superfamily; cl00034"
                     /db_xref="CDD:469587"
     Region          3464..3588
                     /region_name="CC_brat-like"
                     /note="coiled-coil (CC) domain of Drosophila brain tumor
                     (brat) and similar proteins; cl29238"
                     /db_xref="CDD:475168"
     Region          <3635..>3813
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          3637..3720
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(3709..3710,3712..3713)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          3815..3977
                     /region_name="SPRY"
                     /note="SPRY domain; cl02614"
                     /db_xref="CDD:470632"
     CDS             1..3987
                     /gene="CMYA5"
                     /coded_by="XM_061158094.1:1..11964"
                     /db_xref="GeneID:133066734"
ORIGIN      
        1 messdgshaa estlgsdeee tlapeaeeqs ggeedetave sesesepdar lsdqdeegkt
       61 ekkciisdps fsmvtvqred sgitwetsss rpstpwaseg sqtsgvcsle gsalnsppgn
      121 vsfivdevkk vrkrkpkskh gspslrrksn kkrnslesqd vpasktstpl isesqelttq
      181 keksptgtdd kmrkkkstss tppitgaiyk ehkplvlrpv yigtvqykik mfnsvkeeli
      241 plqfygtlpk gyvikeihyr kgkeasisle pesgdrdlrk vvsktgksva qsiedvkvke
      301 lappwrdvfs kgsksltslf shedqkktyd dfplraasaa qptpsshasq aiaeresqls
      361 aprvvpqlpa deakpremkp ssltpdtsva tfletakees eadsqetvia epdssvslpa
      421 ldevktedms sidhsislea ekgslesgap gltasiqedf spereeldlt sqeraepvad
      481 qltpphlsik aekeetvpep sislseplvl eepekeeiem plpmaatpep edsslveeee
      541 iieldypesp svseepfppr lapeveekee nflpllttst pehvtlseee reenesvstd
      601 safvseysap qdwnyelekq eaepvssphv kavsehavls eeendkfeps cptsasisvs
      661 psttektles qsplfsavtp epmiqsgeea sesgrytpds tsaseysvps qateespkkt
      721 vdlksplksr gvseplilse eenedpgmcs pevpslsers lsphttegts ecqapplsav
      781 tsehtvlsee enlgnegvtp dsaltfqnav ppnvtqespk niiddvsllk segvsehktv
      841 leeekedtgf ytpevallpe cslppstteg tpeclaprlp atppdhvvls eeetvgmery
      901 tpssisasel svppyatpes qeeeivhtsp lnlkgssspm ifseeeqedi gpfspdsafv
      961 sefsfpsyat tgkrefecds picltspseh tilsdedtee telfspdsas qasippyrip
     1021 emnrkeiepd slltamaasg ysrfseadee eiapttatpv pehlsspqkq gdepsmsape
     1081 dlsqlpstse aekaeikpda qttstsvsey lilaqkqrtr tylepepevl vppcltsdse
     1141 rgetksgssp aatpaqsptg keetkpalpa sqcsgspdsv havkkeqepk tsltpesade
     1201 qmallkvesk geivpdsqea iahvlrdqem epqppnvpes gmkdsvlpdl adepkkdvkp
     1261 nlaptvtsel eqrrlsenep evmkpysplk etslsrpeis svvktevkld skvtgtprvl
     1321 hstspgveqe vehgppvpef salseeikke iepsssittt setkhdsnlt klakeeiltd
     1381 lplttpiehp vltkveksel gsvlppideh slfkedkvai kaspppteta asqypawsev
     1441 ekeikfylpe sisslsehsv lskvdtedik pglaiiktls sqhsdvakea svedkqdlsf
     1501 stvldseyld lsqkknsvsa levsgpehvp slslggeikk tetevpssqn mspapkyivp
     1561 kgkdevtass ppelehltse dsastfltfs gdqreqaaet psviqgdfrs ekpglalaql
     1621 clepeerdkp rpvselpgtg nagseftgdl srqsgsiqte hiksplpete ssvlakglpe
     1681 lrsggegkee nrelhvsttv peisevssyl reepqiqemk svsakvvslg sreaftsgle
     1741 gdspeelqsy tlsskglsee lnhsaefkke ekqeispllp tgnlkaqvte dtvtklnetd
     1801 qpnsfhvlqt vtepskitss dlfvqqkpee aldsdqattl pdmsrsfadk qdlgikqglf
     1861 mkenlplees klfmtteptd vkethmqqal ispkdenwml keperdlvsh heervmgsvq
     1921 ldssgtsdlm teqlkpappe kahtpeirkq ilppsaeeph lafqepvstl dtscdnvetf
     1981 atetyssedi kwapkpkslv pagnvdrsea egkqtlssvg geslvvekan teisrpcked
     2041 sqeeiktpye gglqkpvsgp pmeqvksetp sslvkaarvl aeevepalgv ekeahgrisp
     2101 lpgekpleep svvqpkvadd anergrppse vkaptqvkpl sstqeneepq plespeviqk
     2161 ppkqqkavep siseekgkkg issftswvss fffrsstldn kvaekedlea qpspseektv
     2221 tvidsespap vdvhgtekpv dhlvpeakpe tasesadslv ksgehqdfke kptllsnvev
     2281 spqpksnfea ssddygkkdf ldyseemdlt svvtsadgkg hlriqsyspm geksimeeak
     2341 navplyvtds krpqkpeisp rskwiisilk eeprsdqkek plflvdatdk vpqqpesass
     2401 sfasknitee setlesiilp geepkgslid lgedrlgkem pkpvslkise eeiklrsvsp
     2461 aeekgnlgmr syslaekkvl aekqetaapl ehrdineiek akiihgpspv kleepkaatv
     2521 lqqvyqnedh qkrykiieee kreekeersq tfsegseqqe iqpcsisiag hqpeesdisf
     2581 rltlgetqpf slvktteaae tsettiseay seiretkavg sqphpleere vlvektkafl
     2641 pvdlpyhyei nepslpkegn lvlekssvdv vthseekgqg leselpkggs vgttkestqs
     2701 spskdseril drpfgetksl etpsylwssv epqtlasgas pevspekkqe lpwsevtpdr
     2761 pevhtaqtsk dqtsemfeqp vlvskhhlea vedshvyepr psassnyaqf itnastvsad
     2821 emvskepedt svrdeeftvt skpaglseeq ksafsiiseg ceilnihapa fissvdqees
     2881 eqmqdkleyl eekisfkpil lhdeseavac hktlqskled sdikviplke dqqkeihtak
     2941 eeistdsetg dlafnqptsp needyfekyt lidynispdp ekqrapwkln veaelskevp
     3001 eetvsfpecp eegaleheyd lvkldesfyg lekdysklsd petqkslviq kltdrdasks
     3061 terdldsksp gmplfdeeeg vlsrtqifpt takaidpell eeppalafly kdlyeeavge
     3121 kkkegetase gdsvnseasf psrnsdtddg tgiyfekyil kddilhdtsv tekdqgqgle
     3181 eepigkddsy qpitaegeiw gkfattgree sleekqktay regesvghme tldnvamqrk
     3241 apiteevrvv tqrisyavpf edthhvlerv detssqtnea ananpevsln vpvqvsfpee
     3301 esasgatciq etlqeehqim vppepsedwv rsspvqdeye faeslnyevv tqdtlsedly
     3361 sestpedvls qgkesfehvs enelvteveq rksaeqkelg ieiaeqdqll selvtekeqk
     3421 emktsqidty cytckspisa vdkmlgthqd heistldtai savkvqladf ledlqekslr
     3481 ieafvseies ffntieencs knekrleeqn eemmkkvlaq ydekaqsfee vkkkkmeflh
     3541 dqmvhflqsm dtakdtleti vreaeeldet vfltsfeein erllsament aslekmpaaf
     3601 slfehyddss arsdqmlkqv avpqpprlep qepnsatstt iavywsmnke dvidsfqvyc
     3661 meepqddrev tdlveeyrvt vkesycvfed lepdrcyqvw vmavnftgcs lpseraifrt
     3721 apstpvirae dctvcwnsat irwwtaspea tetytleycr qhapegeglr sfsgikglql
     3781 kvnlqpndny ffyvratnaf gtseqseaal istrgtrfll lretahpalq issngtvisf
     3841 aerrrlteip svlgeelpac gqhywettvt dcpayrlgic sssavqagtl gqgetswymh
     3901 csgpqrytff ysgivsdvhv terparvgil ldyttqrllf inaetgqmlf iirhrfnegv
     3961 hpafalekpg kctlhlgiep pdsarqk
//
LOCUS       XP_061014078             489 aa            linear   MAM 02-DEC-2023
DEFINITION  poly(A) RNA polymerase GLD2 isoform X1 [Dama dama].
ACCESSION   XP_061014078
VERSION     XP_061014078.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158095.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..489
                     /product="poly(A) RNA polymerase GLD2 isoform X1"
                     /calculated_mol_wt=56608
     Region          154..>408
                     /region_name="TRF4"
                     /note="DNA polymerase sigma [Replication, recombination
                     and repair]; COG5260"
                     /db_xref="CDD:227585"
     CDS             1..489
                     /gene="TENT2"
                     /coded_by="XM_061158095.1:481..1950"
                     /db_xref="GeneID:133066735"
ORIGIN      
        1 mfpnsilgrp pftpnhqqhn nffalspsly shqqlidaqf sfhnadlsra vslqqltygn
       61 vspiqtsasp lfrgrkrlsd eknlpldgkr qrfhsphqep aivnhivpls derrysmspl
      121 fhthyvpdiv rcvppfreis ilepreitlp eakdklsqqi lelfeacqqq vsdlkkkelc
      181 rtelqreiql lfpqsrlflv gsslngfgtr ssdgdlclvv keepvnqkte arhiltlvhk
      241 hfctrlssyi erpqlirakv pivkfrdkvs cvefdlnvnn ivgirntfll rtyaylenrv
      301 rplvlvikkw ashhdindas rgtlssyslv lmvlhylqtl pepilpsiqk iypesfspsv
      361 qlhlvhqapc nvppylskne snlgdlllgf lkyyatefdw nsqmisvrea kaiprpdgie
      421 wrskyicvev maqiekqkrf eqyttfkscy pekitglyfl iknssyiiir fvylhrgffl
      481 ivlvfmfys
//
LOCUS       XP_061014079             480 aa            linear   MAM 02-DEC-2023
DEFINITION  poly(A) RNA polymerase GLD2 isoform X2 [Dama dama].
ACCESSION   XP_061014079
VERSION     XP_061014079.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158096.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..480
                     /product="poly(A) RNA polymerase GLD2 isoform X2"
                     /calculated_mol_wt=55323
     Region          154..>464
                     /region_name="TRF4"
                     /note="DNA polymerase sigma [Replication, recombination
                     and repair]; COG5260"
                     /db_xref="CDD:227585"
     CDS             1..480
                     /gene="TENT2"
                     /coded_by="XM_061158096.1:481..1923"
                     /db_xref="GeneID:133066735"
ORIGIN      
        1 mfpnsilgrp pftpnhqqhn nffalspsly shqqlidaqf sfhnadlsra vslqqltygn
       61 vspiqtsasp lfrgrkrlsd eknlpldgkr qrfhsphqep aivnhivpls derrysmspl
      121 fhthyvpdiv rcvppfreis ilepreitlp eakdklsqqi lelfeacqqq vsdlkkkelc
      181 rtelqreiql lfpqsrlflv gsslngfgtr ssdgdlclvv keepvnqkte arhiltlvhk
      241 hfctrlssyi erpqlirakv pivkfrdkvs cvefdlnvnn ivgirntfll rtyaylenrv
      301 rplvlvikkw ashhdindas rgtlssyslv lmvlhylqtl pepilpsiqk iypesfspsv
      361 qlhlvhqapc nvppylskne snlgdlllgf lkyyatefdw nsqmisvrea kaiprpdgie
      421 wrskyicvee pfdgtntara vhekqkfdmi kdqflkswhr lknrkdlnsi lplraailkr
//
LOCUS       XP_061014080             354 aa            linear   MAM 02-DEC-2023
DEFINITION  homer protein homolog 1 [Dama dama].
ACCESSION   XP_061014080
VERSION     XP_061014080.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158097.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..354
                     /product="homer protein homolog 1"
                     /calculated_mol_wt=40227
     Region          3..111
                     /region_name="EVH1_Homer_Vesl"
                     /note="Homer/Vesl family proteins EVH1 domain; cd01206"
                     /db_xref="CDD:269917"
     Site            order(24,70,74,89)
                     /site_type="other"
                     /note="proline-rich peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269917"
     Region          <113..>173
                     /region_name="PHA03418"
                     /note="hypothetical E4 protein; Provisional"
                     /db_xref="CDD:177646"
     Region          <181..>353
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..354
                     /gene="HOMER1"
                     /coded_by="XM_061158097.1:820..1884"
                     /db_xref="GeneID:133066737"
ORIGIN      
        1 mgeqpifstr ahvfqidpnt kknwvptskh avtvsyfyds trnvyriisl dgakaiinst
       61 itpnmtftkt sqkfgqwads rantvyglgf ssehhlskfa ekfqefkeaa rlakeksqek
      121 meltstpsqe saggdlqspl tpesingtdd ertpdmtqns eprpeptqna lpfshssais
      181 khweaelatl kgnnakltaa llestanvkq wkqqlaayqe eaerlhkrvt elecvssqan
      241 avhthkteln qtiqeleetl kvkeeeierl kqeidnarel qeqrdsltqk lqeveirnkd
      301 legqlsdleq rleksqneqe afrnnlktll eildgkifel telrdnlakl lers
//
LOCUS       XP_061014081             992 aa            linear   MAM 02-DEC-2023
DEFINITION  junction-mediating and -regulatory protein isoform X1 [Dama dama].
ACCESSION   XP_061014081
VERSION     XP_061014081.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158098.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..992
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..992
                     /product="junction-mediating and -regulatory protein
                     isoform X1"
                     /calculated_mol_wt=110572
     Region          12..54
                     /region_name="WHAMM-JMY_N"
                     /note="N-terminal of Junction-mediating and WASP
                     homolog-associated; pfam15920"
                     /db_xref="CDD:464942"
     Region          <65..>163
                     /region_name="PRK14959"
                     /note="DNA polymerase III subunits gamma and tau;
                     Provisional"
                     /db_xref="CDD:184923"
     Region          <157..266
                     /region_name="PTZ00378"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:173571"
     Region          232..585
                     /region_name="JMY"
                     /note="Junction-mediating and -regulatory protein;
                     pfam15871"
                     /db_xref="CDD:464915"
     CDS             1..992
                     /gene="JMY"
                     /coded_by="XM_061158098.1:272..3250"
                     /db_xref="GeneID:133066738"
ORIGIN      
        1 msfaleetve sdwvavrphv fderekhkfv fivawneieg kfaitchnrt aqrqrsgtre
       61 qagarggaes galasdgtrg pgspagkgrp eatasatsgr spgsrrrpaw segssprsac
      121 slrgdpplws pagkgaespl rspvranpsp vrrasggrdv agsapaaapp aakeapmssv
      181 rvvsacgtvt eeievlemvr edeadpaava lsaaeqppaa telespaeec swaglfsfqd
      241 lravhqqlcs vnsqleqclp vfpeepsgmw tvlfggapem teqeidtlcy qlqvylghgl
      301 dtcgwkilsq vlftetddpe eyyeslselr qkgyeevlqr arkriqelld khkntesmve
      361 lldlyqmede aysslaeatt elyqyllqpf rdmrelamlr rqqikismen dylgprries
      421 lqkedadwqr kahmavlsiq dltvkyfeit akaqkavydr mradqkkfgk aswaaaaerm
      481 eklqyavske tlqmmrakei cleqkkhalk eemqslqggt eaiarldqle adyydlqlql
      541 yevqfeilkc eellltaqle sikrlisekr devvyydtye smeamlekee maasvhfqre
      601 elqklqqkar qlearrgrvs akkaylrnkk eiciakhnek fqqrlrsede yrthhtvqlk
      661 rdklhdeeer ksawvsqerq ktldrlrnfk qrypgqvilk strlrlaqar rrsaagpvsc
      721 edqcdgppaa lqieekgggl dggraalrss qaadarsltp pdgppsaqle atsslpsgvt
      781 aelpppvsrp llnpvdcrag svaagplppp lpptpppppp pppppppppl pvgqdgapea
      841 lekglpqmeg sekripksas apsahlfdss qlvsarkklr ktaeglqrrr vsspmdevla
      901 slkrgsfhlk kveqrtlppf pdeddsnnil aqirkgvklk kvqkevlres ftllpdtdpl
      961 trsihealrr ikeaspesed eeealpctdw en
//
LOCUS       XP_061014082             960 aa            linear   MAM 02-DEC-2023
DEFINITION  junction-mediating and -regulatory protein isoform X2 [Dama dama].
ACCESSION   XP_061014082
VERSION     XP_061014082.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158099.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..960
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..960
                     /product="junction-mediating and -regulatory protein
                     isoform X2"
                     /calculated_mol_wt=106534
     Region          6..54
                     /region_name="WHAMM-JMY_N"
                     /note="N-terminal of Junction-mediating and WASP
                     homolog-associated; pfam15920"
                     /db_xref="CDD:464942"
     Region          <65..>163
                     /region_name="PRK14959"
                     /note="DNA polymerase III subunits gamma and tau;
                     Provisional"
                     /db_xref="CDD:184923"
     Region          <157..266
                     /region_name="PTZ00378"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:173571"
     Region          232..585
                     /region_name="JMY"
                     /note="Junction-mediating and -regulatory protein;
                     pfam15871"
                     /db_xref="CDD:464915"
     CDS             1..960
                     /gene="JMY"
                     /coded_by="XM_061158099.1:273..3155"
                     /db_xref="GeneID:133066738"
ORIGIN      
        1 msfaleetve sdwvavrphv fderekhkfv fivawneieg kfaitchnrt aqrqrsgtre
       61 qagarggaes galasdgtrg pgspagkgrp eatasatsgr spgsrrrpaw segssprsac
      121 slrgdpplws pagkgaespl rspvranpsp vrrasggrdv agsapaaapp aakeapmssv
      181 rvvsacgtvt eeievlemvr edeadpaava lsaaeqppaa telespaeec swaglfsfqd
      241 lravhqqlcs vnsqleqclp vfpeepsgmw tvlfggapem teqeidtlcy qlqvylghgl
      301 dtcgwkilsq vlftetddpe eyyeslselr qkgyeevlqr arkriqelld khkntesmve
      361 lldlyqmede aysslaeatt elyqyllqpf rdmrelamlr rqqikismen dylgprries
      421 lqkedadwqr kahmavlsiq dltvkyfeit akaqkavydr mradqkkfgk aswaaaaerm
      481 eklqyavske tlqmmrakei cleqkkhalk eemqslqggt eaiarldqle adyydlqlql
      541 yevqfeilkc eellltaqle sikrlisekr devvyydtye smeamlekee maasvhfqre
      601 elqklqqkar qlearrgrvs akkaylrnkk eiciakhnek fqqrlrsede yrthhtvqlr
      661 ypgqvilkst rlrlaqarrr saagpvsced qcdgppaalq ieekgggldg graalrssqa
      721 adarsltppd gppsaqleat sslpsgvtae lpppvsrpll npvdcragsv aagplppplp
      781 ptpppppppp ppppppplpv gqdgapeale kglpqmegse kripksasap sahlfdssql
      841 vsarkklrkt aeglqrrrvs spmdevlasl krgsfhlkkv eqrtlppfpd eddsnnilaq
      901 irkgvklkkv qkevlresft llpdtdpltr sihealrrik easpesedee ealpctdwen
//
LOCUS       XP_061014084             531 aa            linear   MAM 02-DEC-2023
DEFINITION  arylsulfatase B isoform X1 [Dama dama].
ACCESSION   XP_061014084
VERSION     XP_061014084.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158101.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..531
                     /product="arylsulfatase B isoform X1"
                     /calculated_mol_wt=58917
     Region          43..486
                     /region_name="4-S"
                     /note="N-acetylgalactosamine 4-sulfatase, also called
                     arylsulftase B; cd16029"
                     /db_xref="CDD:293753"
     Site            order(51..52,89,143,145,240,298..299)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293753"
     Site            order(51..52,89,143,145,240,299)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293753"
     CDS             1..531
                     /gene="ARSB"
                     /coded_by="XM_061158101.1:16..1611"
                     /db_xref="GeneID:133066739"
ORIGIN      
        1 mgargaaspp rgpgpllpai lplglllllp lppgsgagag rpphlvfvla ddlgwndvgf
       61 hgsairtprl dalaaggvll dnyytqplct psrsqlltgr yqihtglqhq iiwpcqpsci
      121 pldekllpql lkeagyathm vgkwhlgmyr keclptrrgf dtyfgyllgs edyysherct
      181 lidalnvtrc aldfrdgeev atgyknmyst nvfterattl itnhppekpl flylalqsvh
      241 eplqvpeeyl kpydfirdkn rhhyagmasl mdeavgnvta alesrglwnn tvfifstdng
      301 gqtlaggnnw plrgrkwslw eggvravgfv aspllkrkgv ktrelihisd wlptlvklag
      361 gsiagtkpld gfdvwttise gspsprmell hnidpnfvdi spcpgnsmap akddssrley
      421 safntsihaa irhqnwkllt gypgcghwfp ppsqynisvi pssdppaktl wlfdidrdpe
      481 erhdlsreyp hivkkllsrl qfyqkhsvpv yfpaqdprcd pkatgawgpw m
//
LOCUS       XP_061014085             422 aa            linear   MAM 02-DEC-2023
DEFINITION  arylsulfatase B isoform X2 [Dama dama].
ACCESSION   XP_061014085
VERSION     XP_061014085.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158102.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..422
                     /product="arylsulfatase B isoform X2"
                     /calculated_mol_wt=46525
     Region          43..395
                     /region_name="4-S"
                     /note="N-acetylgalactosamine 4-sulfatase, also called
                     arylsulftase B; cd16029"
                     /db_xref="CDD:293753"
     Site            order(51..52,89,143,145,240,298..299)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293753"
     Site            order(51..52,89,143,145,240,299)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293753"
     CDS             1..422
                     /gene="ARSB"
                     /coded_by="XM_061158102.1:16..1284"
                     /db_xref="GeneID:133066739"
ORIGIN      
        1 mgargaaspp rgpgpllpai lplglllllp lppgsgagag rpphlvfvla ddlgwndvgf
       61 hgsairtprl dalaaggvll dnyytqplct psrsqlltgr yqihtglqhq iiwpcqpsci
      121 pldekllpql lkeagyathm vgkwhlgmyr keclptrrgf dtyfgyllgs edyysherct
      181 lidalnvtrc aldfrdgeev atgyknmyst nvfterattl itnhppekpl flylalqsvh
      241 eplqvpeeyl kpydfirdkn rhhyagmasl mdeavgnvta alesrglwnn tvfifstdng
      301 gqtlaggnnw plrgrkwslw eggvravgfv aspllkrkgv ktrelihisd wlptlvklag
      361 gsiagtkpld gfdvwttise gspsprmell hnidpnfvdi spfehgsvww lkvpetleaq
      421 et
//
LOCUS       XP_061014086             416 aa            linear   MAM 02-DEC-2023
DEFINITION  arylsulfatase B isoform X3 [Dama dama].
ACCESSION   XP_061014086
VERSION     XP_061014086.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158103.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..416
                     /product="arylsulfatase B isoform X3"
                     /calculated_mol_wt=45887
     Region          43..397
                     /region_name="4-S"
                     /note="N-acetylgalactosamine 4-sulfatase, also called
                     arylsulftase B; cd16029"
                     /db_xref="CDD:293753"
     Site            order(51..52,89,143,145,240,298..299)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293753"
     Site            order(51..52,89,143,145,240,299)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293753"
     CDS             1..416
                     /gene="ARSB"
                     /coded_by="XM_061158103.1:16..1266"
                     /db_xref="GeneID:133066739"
ORIGIN      
        1 mgargaaspp rgpgpllpai lplglllllp lppgsgagag rpphlvfvla ddlgwndvgf
       61 hgsairtprl dalaaggvll dnyytqplct psrsqlltgr yqihtglqhq iiwpcqpsci
      121 pldekllpql lkeagyathm vgkwhlgmyr keclptrrgf dtyfgyllgs edyysherct
      181 lidalnvtrc aldfrdgeev atgyknmyst nvfterattl itnhppekpl flylalqsvh
      241 eplqvpeeyl kpydfirdkn rhhyagmasl mdeavgnvta alesrglwnn tvfifstdng
      301 gqtlaggnnw plrgrkwslw eggvravgfv aspllkrkgv ktrelihisd wlptlvklag
      361 gsiagtkpld gfdvwttise gspsprmell hnidpnfvdi spspfseeki rikeer
//
LOCUS       XP_061014087             338 aa            linear   MAM 02-DEC-2023
DEFINITION  secretory carrier-associated membrane protein 1 isoform X1 [Dama
            dama].
ACCESSION   XP_061014087
VERSION     XP_061014087.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158104.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..338
                     /product="secretory carrier-associated membrane protein 1
                     isoform X1"
                     /calculated_mol_wt=37843
     Region          117..292
                     /region_name="SCAMP"
                     /note="SCAMP family; pfam04144"
                     /db_xref="CDD:461193"
     CDS             1..338
                     /gene="SCAMP1"
                     /coded_by="XM_061158104.1:99..1115"
                     /db_xref="GeneID:133066740"
ORIGIN      
        1 msdfdsnpfa dpdlnnpfkd psvtqvtrnv ppgldeynpf sdsrtpppgn vkmpnvpstq
       61 paimkpteeh paytqiakeh alaqaellkr qeelerkaae ldrreremqn lsqhgrknnw
      121 pplpdnfpvg pcfyqdfsvd ipvefqktvk imyylwmfha vtlflnifgc lawfcvdppr
      181 gvdfglsilw fllftpcsfv cwyrplygaf rsdssfrffv fffvyicqfa vhvlqaagfh
      241 nwgncgwiss ltglnksipv gimmiiiaal ftasavislv mfkkvhglyr ttgasfekaq
      301 qefatgvmsn ktvqtaaana astaassaaq nafkgnqi
//
LOCUS       XP_061014088             286 aa            linear   MAM 02-DEC-2023
DEFINITION  secretory carrier-associated membrane protein 1 isoform X2 [Dama
            dama].
ACCESSION   XP_061014088
VERSION     XP_061014088.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158105.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..286
                     /product="secretory carrier-associated membrane protein 1
                     isoform X2"
                     /calculated_mol_wt=32125
     Region          65..240
                     /region_name="SCAMP"
                     /note="SCAMP family; pfam04144"
                     /db_xref="CDD:461193"
     CDS             1..286
                     /gene="SCAMP1"
                     /coded_by="XM_061158105.1:239..1099"
                     /db_xref="GeneID:133066740"
ORIGIN      
        1 mpnvpstqpa imkpteehpa ytqiakehal aqaellkrqe elerkaaeld rreremqnls
       61 qhgrknnwpp lpdnfpvgpc fyqdfsvdip vefqktvkim yylwmfhavt lflnifgcla
      121 wfcvdpprgv dfglsilwfl lftpcsfvcw yrplygafrs dssfrffvff fvyicqfavh
      181 vlqaagfhnw gncgwisslt glnksipvgi mmiiiaalft asavislvmf kkvhglyrtt
      241 gasfekaqqe fatgvmsnkt vqtaaanaas taassaaqna fkgnqi
//
LOCUS       XP_061014089             228 aa            linear   MAM 02-DEC-2023
DEFINITION  LHFPL tetraspan subfamily member 2 protein [Dama dama].
ACCESSION   XP_061014089
VERSION     XP_061014089.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158106.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..228
                     /product="LHFPL tetraspan subfamily member 2 protein"
                     /calculated_mol_wt=24313
     Region          9..204
                     /region_name="L_HMGIC_fpl"
                     /note="Lipoma HMGIC fusion partner-like protein;
                     pfam10242"
                     /db_xref="CDD:463019"
     CDS             1..228
                     /gene="LHFPL2"
                     /coded_by="XM_061158106.1:534..1220"
                     /db_xref="GeneID:133066741"
ORIGIN      
        1 mchvivtcrs mlwtllsivv afaeliafms adwligkakp rgsaepgeqg agppepyhpt
       61 lgiyarcirn pgvqhlpret lcgpyaesfg eiasgfwqat aiflavgifi lctvalvsvf
      121 tmcvqsimkk sifnvcgllq giaglflilg lilypagwgc qkaigycghy asaykpgdcs
      181 lgwafytaig gtvltficav fsaqaeiats sdkvqeeiee gknlicll
//
LOCUS       XP_061014090             228 aa            linear   MAM 02-DEC-2023
DEFINITION  LHFPL tetraspan subfamily member 2 protein [Dama dama].
ACCESSION   XP_061014090
VERSION     XP_061014090.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158107.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..228
                     /product="LHFPL tetraspan subfamily member 2 protein"
                     /calculated_mol_wt=24313
     Region          9..204
                     /region_name="L_HMGIC_fpl"
                     /note="Lipoma HMGIC fusion partner-like protein;
                     pfam10242"
                     /db_xref="CDD:463019"
     CDS             1..228
                     /gene="LHFPL2"
                     /coded_by="XM_061158107.1:507..1193"
                     /db_xref="GeneID:133066741"
ORIGIN      
        1 mchvivtcrs mlwtllsivv afaeliafms adwligkakp rgsaepgeqg agppepyhpt
       61 lgiyarcirn pgvqhlpret lcgpyaesfg eiasgfwqat aiflavgifi lctvalvsvf
      121 tmcvqsimkk sifnvcgllq giaglflilg lilypagwgc qkaigycghy asaykpgdcs
      181 lgwafytaig gtvltficav fsaqaeiats sdkvqeeiee gknlicll
//
LOCUS       XP_061014091             228 aa            linear   MAM 02-DEC-2023
DEFINITION  LHFPL tetraspan subfamily member 2 protein [Dama dama].
ACCESSION   XP_061014091
VERSION     XP_061014091.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158108.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..228
                     /product="LHFPL tetraspan subfamily member 2 protein"
                     /calculated_mol_wt=24313
     Region          9..204
                     /region_name="L_HMGIC_fpl"
                     /note="Lipoma HMGIC fusion partner-like protein;
                     pfam10242"
                     /db_xref="CDD:463019"
     CDS             1..228
                     /gene="LHFPL2"
                     /coded_by="XM_061158108.1:645..1331"
                     /db_xref="GeneID:133066741"
ORIGIN      
        1 mchvivtcrs mlwtllsivv afaeliafms adwligkakp rgsaepgeqg agppepyhpt
       61 lgiyarcirn pgvqhlpret lcgpyaesfg eiasgfwqat aiflavgifi lctvalvsvf
      121 tmcvqsimkk sifnvcgllq giaglflilg lilypagwgc qkaigycghy asaykpgdcs
      181 lgwafytaig gtvltficav fsaqaeiats sdkvqeeiee gknlicll
//
LOCUS       XP_061014092             228 aa            linear   MAM 02-DEC-2023
DEFINITION  LHFPL tetraspan subfamily member 2 protein [Dama dama].
ACCESSION   XP_061014092
VERSION     XP_061014092.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158109.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..228
                     /product="LHFPL tetraspan subfamily member 2 protein"
                     /calculated_mol_wt=24313
     Region          9..204
                     /region_name="L_HMGIC_fpl"
                     /note="Lipoma HMGIC fusion partner-like protein;
                     pfam10242"
                     /db_xref="CDD:463019"
     CDS             1..228
                     /gene="LHFPL2"
                     /coded_by="XM_061158109.1:610..1296"
                     /db_xref="GeneID:133066741"
ORIGIN      
        1 mchvivtcrs mlwtllsivv afaeliafms adwligkakp rgsaepgeqg agppepyhpt
       61 lgiyarcirn pgvqhlpret lcgpyaesfg eiasgfwqat aiflavgifi lctvalvsvf
      121 tmcvqsimkk sifnvcgllq giaglflilg lilypagwgc qkaigycghy asaykpgdcs
      181 lgwafytaig gtvltficav fsaqaeiats sdkvqeeiee gknlicll
//
LOCUS       XP_061014093             228 aa            linear   MAM 02-DEC-2023
DEFINITION  LHFPL tetraspan subfamily member 2 protein [Dama dama].
ACCESSION   XP_061014093
VERSION     XP_061014093.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158110.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..228
                     /product="LHFPL tetraspan subfamily member 2 protein"
                     /calculated_mol_wt=24313
     Region          9..204
                     /region_name="L_HMGIC_fpl"
                     /note="Lipoma HMGIC fusion partner-like protein;
                     pfam10242"
                     /db_xref="CDD:463019"
     CDS             1..228
                     /gene="LHFPL2"
                     /coded_by="XM_061158110.1:617..1303"
                     /db_xref="GeneID:133066741"
ORIGIN      
        1 mchvivtcrs mlwtllsivv afaeliafms adwligkakp rgsaepgeqg agppepyhpt
       61 lgiyarcirn pgvqhlpret lcgpyaesfg eiasgfwqat aiflavgifi lctvalvsvf
      121 tmcvqsimkk sifnvcgllq giaglflilg lilypagwgc qkaigycghy asaykpgdcs
      181 lgwafytaig gtvltficav fsaqaeiats sdkvqeeiee gknlicll
//
LOCUS       XP_061014094             228 aa            linear   MAM 02-DEC-2023
DEFINITION  LHFPL tetraspan subfamily member 2 protein [Dama dama].
ACCESSION   XP_061014094
VERSION     XP_061014094.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158111.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..228
                     /product="LHFPL tetraspan subfamily member 2 protein"
                     /calculated_mol_wt=24313
     Region          9..204
                     /region_name="L_HMGIC_fpl"
                     /note="Lipoma HMGIC fusion partner-like protein;
                     pfam10242"
                     /db_xref="CDD:463019"
     CDS             1..228
                     /gene="LHFPL2"
                     /coded_by="XM_061158111.1:670..1356"
                     /db_xref="GeneID:133066741"
ORIGIN      
        1 mchvivtcrs mlwtllsivv afaeliafms adwligkakp rgsaepgeqg agppepyhpt
       61 lgiyarcirn pgvqhlpret lcgpyaesfg eiasgfwqat aiflavgifi lctvalvsvf
      121 tmcvqsimkk sifnvcgllq giaglflilg lilypagwgc qkaigycghy asaykpgdcs
      181 lgwafytaig gtvltficav fsaqaeiats sdkvqeeiee gknlicll
//
LOCUS       XP_061014095             228 aa            linear   MAM 02-DEC-2023
DEFINITION  LHFPL tetraspan subfamily member 2 protein [Dama dama].
ACCESSION   XP_061014095
VERSION     XP_061014095.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158112.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..228
                     /product="LHFPL tetraspan subfamily member 2 protein"
                     /calculated_mol_wt=24313
     Region          9..204
                     /region_name="L_HMGIC_fpl"
                     /note="Lipoma HMGIC fusion partner-like protein;
                     pfam10242"
                     /db_xref="CDD:463019"
     CDS             1..228
                     /gene="LHFPL2"
                     /coded_by="XM_061158112.1:569..1255"
                     /db_xref="GeneID:133066741"
ORIGIN      
        1 mchvivtcrs mlwtllsivv afaeliafms adwligkakp rgsaepgeqg agppepyhpt
       61 lgiyarcirn pgvqhlpret lcgpyaesfg eiasgfwqat aiflavgifi lctvalvsvf
      121 tmcvqsimkk sifnvcgllq giaglflilg lilypagwgc qkaigycghy asaykpgdcs
      181 lgwafytaig gtvltficav fsaqaeiats sdkvqeeiee gknlicll
//
LOCUS       XP_061014096             228 aa            linear   MAM 02-DEC-2023
DEFINITION  LHFPL tetraspan subfamily member 2 protein [Dama dama].
ACCESSION   XP_061014096
VERSION     XP_061014096.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158113.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..228
                     /product="LHFPL tetraspan subfamily member 2 protein"
                     /calculated_mol_wt=24313
     Region          9..204
                     /region_name="L_HMGIC_fpl"
                     /note="Lipoma HMGIC fusion partner-like protein;
                     pfam10242"
                     /db_xref="CDD:463019"
     CDS             1..228
                     /gene="LHFPL2"
                     /coded_by="XM_061158113.1:728..1414"
                     /db_xref="GeneID:133066741"
ORIGIN      
        1 mchvivtcrs mlwtllsivv afaeliafms adwligkakp rgsaepgeqg agppepyhpt
       61 lgiyarcirn pgvqhlpret lcgpyaesfg eiasgfwqat aiflavgifi lctvalvsvf
      121 tmcvqsimkk sifnvcgllq giaglflilg lilypagwgc qkaigycghy asaykpgdcs
      181 lgwafytaig gtvltficav fsaqaeiats sdkvqeeiee gknlicll
//
LOCUS       XP_061014097             228 aa            linear   MAM 02-DEC-2023
DEFINITION  LHFPL tetraspan subfamily member 2 protein [Dama dama].
ACCESSION   XP_061014097
VERSION     XP_061014097.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158114.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..228
                     /product="LHFPL tetraspan subfamily member 2 protein"
                     /calculated_mol_wt=24313
     Region          9..204
                     /region_name="L_HMGIC_fpl"
                     /note="Lipoma HMGIC fusion partner-like protein;
                     pfam10242"
                     /db_xref="CDD:463019"
     CDS             1..228
                     /gene="LHFPL2"
                     /coded_by="XM_061158114.1:652..1338"
                     /db_xref="GeneID:133066741"
ORIGIN      
        1 mchvivtcrs mlwtllsivv afaeliafms adwligkakp rgsaepgeqg agppepyhpt
       61 lgiyarcirn pgvqhlpret lcgpyaesfg eiasgfwqat aiflavgifi lctvalvsvf
      121 tmcvqsimkk sifnvcgllq giaglflilg lilypagwgc qkaigycghy asaykpgdcs
      181 lgwafytaig gtvltficav fsaqaeiats sdkvqeeiee gknlicll
//
LOCUS       XP_061014099             228 aa            linear   MAM 02-DEC-2023
DEFINITION  LHFPL tetraspan subfamily member 2 protein [Dama dama].
ACCESSION   XP_061014099
VERSION     XP_061014099.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158116.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..228
                     /product="LHFPL tetraspan subfamily member 2 protein"
                     /calculated_mol_wt=24313
     Region          9..204
                     /region_name="L_HMGIC_fpl"
                     /note="Lipoma HMGIC fusion partner-like protein;
                     pfam10242"
                     /db_xref="CDD:463019"
     CDS             1..228
                     /gene="LHFPL2"
                     /coded_by="XM_061158116.1:417..1103"
                     /db_xref="GeneID:133066741"
ORIGIN      
        1 mchvivtcrs mlwtllsivv afaeliafms adwligkakp rgsaepgeqg agppepyhpt
       61 lgiyarcirn pgvqhlpret lcgpyaesfg eiasgfwqat aiflavgifi lctvalvsvf
      121 tmcvqsimkk sifnvcgllq giaglflilg lilypagwgc qkaigycghy asaykpgdcs
      181 lgwafytaig gtvltficav fsaqaeiats sdkvqeeiee gknlicll
//
LOCUS       XP_061014100             228 aa            linear   MAM 02-DEC-2023
DEFINITION  LHFPL tetraspan subfamily member 2 protein [Dama dama].
ACCESSION   XP_061014100
VERSION     XP_061014100.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158117.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..228
                     /product="LHFPL tetraspan subfamily member 2 protein"
                     /calculated_mol_wt=24313
     Region          9..204
                     /region_name="L_HMGIC_fpl"
                     /note="Lipoma HMGIC fusion partner-like protein;
                     pfam10242"
                     /db_xref="CDD:463019"
     CDS             1..228
                     /gene="LHFPL2"
                     /coded_by="XM_061158117.1:571..1257"
                     /db_xref="GeneID:133066741"
ORIGIN      
        1 mchvivtcrs mlwtllsivv afaeliafms adwligkakp rgsaepgeqg agppepyhpt
       61 lgiyarcirn pgvqhlpret lcgpyaesfg eiasgfwqat aiflavgifi lctvalvsvf
      121 tmcvqsimkk sifnvcgllq giaglflilg lilypagwgc qkaigycghy asaykpgdcs
      181 lgwafytaig gtvltficav fsaqaeiats sdkvqeeiee gknlicll
//
LOCUS       XP_061014101            1083 aa            linear   MAM 02-DEC-2023
DEFINITION  AP-3 complex subunit beta-1 [Dama dama].
ACCESSION   XP_061014101
VERSION     XP_061014101.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158118.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1083
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1083
                     /product="AP-3 complex subunit beta-1"
                     /calculated_mol_wt=119416
     Region          39..581
                     /region_name="Adaptin_N"
                     /note="Adaptin N terminal region; pfam01602"
                     /db_xref="CDD:396262"
     Site            order(96..97,100,103..104,133..134,137,140..141,144,
                     168..169,172,175..176,179,205..206,209,212..213)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          116..144
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          150..180
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          188..213
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          802..947
                     /region_name="AP3B1_C"
                     /note="Clathrin-adaptor complex-3 beta-1 subunit
                     C-terminal; pfam14796"
                     /db_xref="CDD:464319"
     CDS             1..1083
                     /gene="AP3B1"
                     /coded_by="XM_061158118.1:155..3406"
                     /db_xref="GeneID:133066743"
ORIGIN      
        1 mssnsfayne qsgggeatel gqeatstisp sgafglfssd mkknedlkqm lesnkdsakl
       61 damkrivgmi akgknaself pavvknvask nieikklvyv ylvryaeeqq dlallsistf
      121 qralkdpnql irasalrvls sirvpiivpi mmlaikeasa dlspyvrkna ahaiqklysl
      181 dpeqkemlie iiekllkdks tlvagsvvma feevcpdrid lihknyrklc nllvdveewg
      241 qvviihmltr yartqfvspw kegdgledne kdfydsdeeq kekadkrkrp ytmdpdhrll
      301 irntkpllqs rnaavvmava qlywhiapks eagiiskslv rllrsnrevq yivlqniatm
      361 siqrkgmfep ylksfyvrst dptmikilkl eiltnlanea nistllrefq tyvksqdkqf
      421 aaatiqtigr catsitevsd tclnglvcll snrdeivvae svvvikkllq mqpiqhgeii
      481 khmaklldsi tvpvarasil wligencerv pkiapdvlrk taksftsedd lvklqilnlg
      541 aklyltnskq tklltqyiln lgkydqnydi rdrtrfirql ivpneksgal skyakkifla
      601 qkpapvlesp fkdrdhfqlg tlshtlntka tgylelsnwp evapdpsvrn vevielakew
      661 tpagkakken pdkkfysese eeedssesss dsgsesgset gedeedssgd sggdssesgs
      721 eseagkkrva ksskakgkgd skdvdkeken sktsesssge sssieesssd sesesesese
      781 sesrkvtkek ekktkqdrna ltkdvslldl ddfnpvstpv alptpalsps liadleglnl
      841 satssvisvs tpvfvpgkth vllhrmsgkg laahyffprq pcifgdkmvs vqitlnnttd
      901 qkienihvge kklpmgmqmh vfnpieslep agsitvsmgi dfcdstqtan fqlctkddcf
      961 svsiqppvge lllpvamsek dfkkeqgmls gmnetsttiv aapqnfassv ilqkvanvan
     1021 vgavpsgqdn vhrfaaktvh sgslmlvtve lkeastaqlv intektvias vllrelkpvl
     1081 sqg
//
LOCUS       XP_061014102             108 aa            linear   MAM 02-DEC-2023
DEFINITION  tubulin-specific chaperone A [Dama dama].
ACCESSION   XP_061014102
VERSION     XP_061014102.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158119.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..108
                     /product="tubulin-specific chaperone A"
                     /calculated_mol_wt=12574
     Region          4..101
                     /region_name="TBCA"
                     /note="Tubulin binding cofactor A; pfam02970"
                     /db_xref="CDD:460769"
     CDS             1..108
                     /gene="TBCA"
                     /coded_by="XM_061158119.1:88..414"
                     /db_xref="GeneID:133066744"
ORIGIN      
        1 madprvrqik iktgvvkrlv kekmmyekea kqqeekiekm kaedgenyai kkqaeilqes
       61 rmmipdcrrr leaahadllq llesekdlee aeeykearlv ldsvklea
//
LOCUS       XP_061014103             885 aa            linear   MAM 02-DEC-2023
DEFINITION  high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic
            phosphodiesterase 8B isoform X1 [Dama dama].
ACCESSION   XP_061014103
VERSION     XP_061014103.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158120.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..885
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..885
                     /product="high affinity cAMP-specific and IBMX-insensitive
                     3',5'-cyclic phosphodiesterase 8B isoform X1"
                     /calculated_mol_wt=98487
     Region          1..47
                     /region_name="PDE8"
                     /note="PDE8 phosphodiesterase; pfam08629"
                     /db_xref="CDD:400795"
     Region          273..>376
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          614..861
                     /region_name="PDEase_I"
                     /note="3'5'-cyclic nucleotide phosphodiesterase;
                     pfam00233"
                     /db_xref="CDD:459723"
     CDS             1..885
                     /gene="PDE8B"
                     /coded_by="XM_061158120.1:1..2658"
                     /db_xref="GeneID:133066745"
ORIGIN      
        1 mgcapsihvs qsgviycrds desnsprqtt gvsqgpaapl hglfvqtdaa daipqsrasg
       61 ppgaararra rgelgssssa gsagpaattc rgrrrhccss aeaetqtsyt svkqvssaev
      121 rigpmrltqd piqvllifak edsqsdgfww acdragyscn iartpesale cfldkhheii
      181 vidhrqtrnf daeavcrsir atnpsehavi lavvsqasgn yeeasvlpll hagfnrrfme
      241 nssiiacyne liqiehgevr sqfklracns vftaldhche aieitsddhv iqyvnpafer
      301 mmgyhkgell gkelaelpks dknradlldt intcikkgke wqgvyyarrk sgdsiqqhvk
      361 itpvigqggk irhfvslkkl cctsdkskqi lkihrdsgdn sqteshsfry knrrkesidv
      421 ksissrgsda pslqnrryps marihsmtie apitkvinii naaqenspvt vaealdrvle
      481 ilrttelysp qlgtkdedph tsdlvgglmt dglrrlsgne yvftknvpqs hshlampvti
      541 ndvppsiaql ldneeswefn ifeleavthk rplvylglkv fsrfgvcefl hcsettlraw
      601 lqvieanyhs snayhnstha advlhataff lgkervkgsl dqldevaali aatvhdvdhp
      661 grtnsflcna gselavlynd tavleshhta lafqltvkds kcnifknidr nhyrtlrqai
      721 idmvlatemt khfehvnkfv nsinkpmaae idgsdcecsp pgknfpenqt likrmmikca
      781 dvanpcrpld lciewagris eeyfaqtdee krqglpvvmp vfdrntcsip ksqisfidyf
      841 itdmfdawda fahlptlmqh ladnykhwkt lddlkckslr lpsds
//
LOCUS       XP_061014104             884 aa            linear   MAM 02-DEC-2023
DEFINITION  high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic
            phosphodiesterase 8B isoform X2 [Dama dama].
ACCESSION   XP_061014104
VERSION     XP_061014104.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158121.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..884
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..884
                     /product="high affinity cAMP-specific and IBMX-insensitive
                     3',5'-cyclic phosphodiesterase 8B isoform X2"
                     /calculated_mol_wt=98359
     Region          1..47
                     /region_name="PDE8"
                     /note="PDE8 phosphodiesterase; pfam08629"
                     /db_xref="CDD:400795"
     Region          272..>375
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          613..860
                     /region_name="PDEase_I"
                     /note="3'5'-cyclic nucleotide phosphodiesterase;
                     pfam00233"
                     /db_xref="CDD:459723"
     CDS             1..884
                     /gene="PDE8B"
                     /coded_by="XM_061158121.1:1..2655"
                     /db_xref="GeneID:133066745"
ORIGIN      
        1 mgcapsihvs qsgviycrds desnsprqtt gvsqgpaapl hglfvqtdaa daipqsrasg
       61 ppgaararra rgelgssssa gsagpaattc rgrrrhccss aeaetqtsyt svkvssaevr
      121 igpmrltqdp iqvllifake dsqsdgfwwa cdragyscni artpesalec fldkhheiiv
      181 idhrqtrnfd aeavcrsira tnpsehavil avvsqasgny eeasvlpllh agfnrrfmen
      241 ssiiacynel iqiehgevrs qfklracnsv ftaldhchea ieitsddhvi qyvnpaferm
      301 mgyhkgellg kelaelpksd knradlldti ntcikkgkew qgvyyarrks gdsiqqhvki
      361 tpvigqggki rhfvslkklc ctsdkskqil kihrdsgdns qteshsfryk nrrkesidvk
      421 sissrgsdap slqnrrypsm arihsmtiea pitkviniin aaqenspvtv aealdrvlei
      481 lrttelyspq lgtkdedpht sdlvgglmtd glrrlsgney vftknvpqsh shlampvtin
      541 dvppsiaqll dneeswefni feleavthkr plvylglkvf srfgvceflh csettlrawl
      601 qvieanyhss nayhnsthaa dvlhataffl gkervkgsld qldevaalia atvhdvdhpg
      661 rtnsflcnag selavlyndt avleshhtal afqltvkdsk cnifknidrn hyrtlrqaii
      721 dmvlatemtk hfehvnkfvn sinkpmaaei dgsdcecspp gknfpenqtl ikrmmikcad
      781 vanpcrpldl ciewagrise eyfaqtdeek rqglpvvmpv fdrntcsipk sqisfidyfi
      841 tdmfdawdaf ahlptlmqhl adnykhwktl ddlkckslrl psds
//
LOCUS       XP_061014105             780 aa            linear   MAM 02-DEC-2023
DEFINITION  high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic
            phosphodiesterase 8B isoform X3 [Dama dama].
ACCESSION   XP_061014105
VERSION     XP_061014105.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158122.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..780
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..780
                     /product="high affinity cAMP-specific and IBMX-insensitive
                     3',5'-cyclic phosphodiesterase 8B isoform X3"
                     /calculated_mol_wt=87839
     Region          168..>271
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          509..756
                     /region_name="PDEase_I"
                     /note="3'5'-cyclic nucleotide phosphodiesterase;
                     pfam00233"
                     /db_xref="CDD:459723"
     CDS             1..780
                     /gene="PDE8B"
                     /coded_by="XM_061158122.1:148..2490"
                     /db_xref="GeneID:133066745"
ORIGIN      
        1 mdppnagqqv ssaevrigpm rltqdpiqvl lifakedsqs dgfwwacdra gyscniartp
       61 esalecfldk hheiividhr qtrnfdaeav crsiratnps ehavilavvs qasgnyeeas
      121 vlpllhagfn rrfmenssii acyneliqie hgevrsqfkl racnsvftal dhcheaieit
      181 sddhviqyvn pafermmgyh kgellgkela elpksdknra dlldtintci kkgkewqgvy
      241 yarrksgdsi qqhvkitpvi gqggkirhfv slkklcctsd kskqilkihr dsgdnsqtes
      301 hsfryknrrk esidvksiss rgsdapslqn rrypsmarih smtieapitk viniinaaqe
      361 nspvtvaeal drvleilrtt elyspqlgtk dedphtsdlv gglmtdglrr lsgneyvftk
      421 nvpqshshla mpvtindvpp siaqlldnee swefnifele avthkrplvy lglkvfsrfg
      481 vceflhcset tlrawlqvie anyhssnayh nsthaadvlh atafflgker vkgsldqlde
      541 vaaliaatvh dvdhpgrtns flcnagsela vlyndtavle shhtalafql tvkdskcnif
      601 knidrnhyrt lrqaiidmvl atemtkhfeh vnkfvnsink pmaaeidgsd cecsppgknf
      661 penqtlikrm mikcadvanp crpldlciew agriseeyfa qtdeekrqgl pvvmpvfdrn
      721 tcsipksqis fidyfitdmf dawdafahlp tlmqhladny khwktlddlk ckslrlpsds
//
LOCUS       XP_061014106             779 aa            linear   MAM 02-DEC-2023
DEFINITION  high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic
            phosphodiesterase 8B isoform X4 [Dama dama].
ACCESSION   XP_061014106
VERSION     XP_061014106.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158123.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..779
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..779
                     /product="high affinity cAMP-specific and IBMX-insensitive
                     3',5'-cyclic phosphodiesterase 8B isoform X4"
                     /calculated_mol_wt=87711
     Region          167..>270
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          508..755
                     /region_name="PDEase_I"
                     /note="3'5'-cyclic nucleotide phosphodiesterase;
                     pfam00233"
                     /db_xref="CDD:459723"
     CDS             1..779
                     /gene="PDE8B"
                     /coded_by="XM_061158123.1:148..2487"
                     /db_xref="GeneID:133066745"
ORIGIN      
        1 mdppnagqvs saevrigpmr ltqdpiqvll ifakedsqsd gfwwacdrag yscniartpe
       61 salecfldkh heiividhrq trnfdaeavc rsiratnpse havilavvsq asgnyeeasv
      121 lpllhagfnr rfmenssiia cyneliqieh gevrsqfklr acnsvftald hcheaieits
      181 ddhviqyvnp afermmgyhk gellgkelae lpksdknrad lldtintcik kgkewqgvyy
      241 arrksgdsiq qhvkitpvig qggkirhfvs lkklcctsdk skqilkihrd sgdnsqtesh
      301 sfryknrrke sidvksissr gsdapslqnr rypsmarihs mtieapitkv iniinaaqen
      361 spvtvaeald rvleilrtte lyspqlgtkd edphtsdlvg glmtdglrrl sgneyvftkn
      421 vpqshshlam pvtindvpps iaqlldnees wefnifelea vthkrplvyl glkvfsrfgv
      481 ceflhcsett lrawlqviea nyhssnayhn sthaadvlha tafflgkerv kgsldqldev
      541 aaliaatvhd vdhpgrtnsf lcnagselav lyndtavles hhtalafqlt vkdskcnifk
      601 nidrnhyrtl rqaiidmvla temtkhfehv nkfvnsinkp maaeidgsdc ecsppgknfp
      661 enqtlikrmm ikcadvanpc rpldlciewa griseeyfaq tdeekrqglp vvmpvfdrnt
      721 csipksqisf idyfitdmfd awdafahlpt lmqhladnyk hwktlddlkc kslrlpsds
//
LOCUS       XP_061014107             761 aa            linear   MAM 02-DEC-2023
DEFINITION  high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic
            phosphodiesterase 8B isoform X5 [Dama dama].
ACCESSION   XP_061014107
VERSION     XP_061014107.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158124.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..761
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..761
                     /product="high affinity cAMP-specific and IBMX-insensitive
                     3',5'-cyclic phosphodiesterase 8B isoform X5"
                     /calculated_mol_wt=85904
     Region          149..>252
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          490..740
                     /region_name="PDEase_I"
                     /note="3'5'-cyclic nucleotide phosphodiesterase;
                     pfam00233"
                     /db_xref="CDD:459723"
     CDS             1..761
                     /gene="PDE8B"
                     /coded_by="XM_061158124.1:88..2373"
                     /db_xref="GeneID:133066745"
ORIGIN      
        1 mrltqdpiqv llifakedsq sdgfwwacdr agyscniart pesalecfld khheiividh
       61 rqtrnfdaea vcrsiratnp sehavilavv sqasgnyeea svlpllhagf nrrfmenssi
      121 iacyneliqi ehgevrsqfk lracnsvfta ldhcheaiei tsddhviqyv npafermmgy
      181 hkgellgkel aelpksdknr adlldtintc ikkgkewqgv yyarrksgds iqqhvkitpv
      241 igqggkirhf vslkklccts dkskqilkih rdsgdnsqte shsfryknrr kesidvksis
      301 srgsdapslq nrrypsmari hsmtieapit kviniinaaq enspvtvaea ldrvleilrt
      361 telyspqlgt kdedphtsdl vgglmtdglr rlsgneyvft knvpqshshl ampvtindvp
      421 psiaqlldne eswefnifel eavthkrplv ylglkvfsrf gvceflhcse ttlrawlqvi
      481 eanyhssnay hnsthaadvl hatafflgke rvkgsldqld evaaliaatv hdvdhpgrtn
      541 sflcnagsel avlyndtavl eshhtalafq ltvkdskcni fknidrnhyr tlrqaiidmv
      601 latemtkhfe hvnkfvnsin kpmaaeidgs dcecsppgkn fpenqtlikr mmikcadvan
      661 pcrpldlcie wagriseeyf aqtdeekrqg lpvvmpvfdr ntcsipksqi sfidyfitdm
      721 fdawdafahl ptlmqhladn ykhwktlddl kckslrlpsd s
//
LOCUS       XP_061014108             761 aa            linear   MAM 02-DEC-2023
DEFINITION  high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic
            phosphodiesterase 8B isoform X5 [Dama dama].
ACCESSION   XP_061014108
VERSION     XP_061014108.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158125.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..761
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..761
                     /product="high affinity cAMP-specific and IBMX-insensitive
                     3',5'-cyclic phosphodiesterase 8B isoform X5"
                     /calculated_mol_wt=85904
     Region          149..>252
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          490..740
                     /region_name="PDEase_I"
                     /note="3'5'-cyclic nucleotide phosphodiesterase;
                     pfam00233"
                     /db_xref="CDD:459723"
     CDS             1..761
                     /gene="PDE8B"
                     /coded_by="XM_061158125.1:97..2382"
                     /db_xref="GeneID:133066745"
ORIGIN      
        1 mrltqdpiqv llifakedsq sdgfwwacdr agyscniart pesalecfld khheiividh
       61 rqtrnfdaea vcrsiratnp sehavilavv sqasgnyeea svlpllhagf nrrfmenssi
      121 iacyneliqi ehgevrsqfk lracnsvfta ldhcheaiei tsddhviqyv npafermmgy
      181 hkgellgkel aelpksdknr adlldtintc ikkgkewqgv yyarrksgds iqqhvkitpv
      241 igqggkirhf vslkklccts dkskqilkih rdsgdnsqte shsfryknrr kesidvksis
      301 srgsdapslq nrrypsmari hsmtieapit kviniinaaq enspvtvaea ldrvleilrt
      361 telyspqlgt kdedphtsdl vgglmtdglr rlsgneyvft knvpqshshl ampvtindvp
      421 psiaqlldne eswefnifel eavthkrplv ylglkvfsrf gvceflhcse ttlrawlqvi
      481 eanyhssnay hnsthaadvl hatafflgke rvkgsldqld evaaliaatv hdvdhpgrtn
      541 sflcnagsel avlyndtavl eshhtalafq ltvkdskcni fknidrnhyr tlrqaiidmv
      601 latemtkhfe hvnkfvnsin kpmaaeidgs dcecsppgkn fpenqtlikr mmikcadvan
      661 pcrpldlcie wagriseeyf aqtdeekrqg lpvvmpvfdr ntcsipksqi sfidyfitdm
      721 fdawdafahl ptlmqhladn ykhwktlddl kckslrlpsd s
//
LOCUS       XP_061014109             459 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 41 [Dama dama].
ACCESSION   XP_061014109
VERSION     XP_061014109.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158126.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..459
                     /product="WD repeat-containing protein 41"
                     /calculated_mol_wt=51572
     Region          38..350
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(42,59,63,69..70,82..83,108,112,118..119,131..132,
                     149,154,158..159,170,189,194,201..202,220..221,238,242,
                     248..249,280..281,299,307..308,321..322,339,343,349..350)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          88..131
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          136..168
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          176..219
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          231..270
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          286..323
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          358..396
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          405..450
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..459
                     /gene="WDR41"
                     /coded_by="XM_061158126.1:302..1681"
                     /db_xref="GeneID:133066747"
ORIGIN      
        1 mlrwligggr epqglaeksp lqtigeeqtq npytellvlk ahhdivrylv rlddyrfasa
       61 gddgivvvwn aqtgekllef sghtqkitai itlpcletce eknqliltas adrtviewdc
      121 dtgrqvqkvs cfqstvkcla vlqrldvwls ggndlcvwnr kldllcktsh lsdtgisali
      181 eipkncvvaa vgkeliifrl vaptegslgw dilevkrlld hqdnilslln vndvsfvsgs
      241 hvgelivwdt lgwtvqacer nfwdpspqld aqreiklcqk pndvsirhlt wdeenvfvav
      301 grglyvynlq mkrvtacqkt ahdssvlhvv rlpnrqvisc sedgsvriwe lrerqqlsve
      361 pvptgffnmw gfgrvnkqas hpvkkqqena tscsleligd lighsssvem flyfedhglv
      421 tcsadhliil wkngeresgl rslklfqkle engdlylsv
//
LOCUS       XP_061014110             714 aa            linear   MAM 02-DEC-2023
DEFINITION  angiogenic factor with G patch and FHA domains 1 isoform X1 [Dama
            dama].
ACCESSION   XP_061014110
VERSION     XP_061014110.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158127.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..714
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..714
                     /product="angiogenic factor with G patch and FHA domains 1
                     isoform X1"
                     /calculated_mol_wt=80579
     Region          <29..>78
                     /region_name="DUF745"
                     /note="Protein of unknown function (DUF745); pfam05335"
                     /db_xref="CDD:398808"
     Region          200..253
                     /region_name="OCRE_VG5Q"
                     /note="OCRE domain found in angiogenic factor VG5Q and
                     similar proteins; cd16164"
                     /db_xref="CDD:293883"
     Region          205..212
                     /region_name="OCRE repeat 1"
                     /note="OCRE repeat 1 [structural motif]"
                     /db_xref="CDD:293883"
     Region          213..220
                     /region_name="OCRE repeat 2"
                     /note="OCRE repeat 2 [structural motif]"
                     /db_xref="CDD:293883"
     Region          221..228
                     /region_name="OCRE repeat 3"
                     /note="OCRE repeat 3 [structural motif]"
                     /db_xref="CDD:293883"
     Region          229..235
                     /region_name="OCRE repeat 4"
                     /note="OCRE repeat 4 [structural motif]"
                     /db_xref="CDD:293883"
     Region          238..245
                     /region_name="OCRE repeat 5"
                     /note="OCRE repeat 5 [structural motif]"
                     /db_xref="CDD:293883"
     Region          406..529
                     /region_name="FHA_AGGF1"
                     /note="forkhead associated (FHA) domain found in
                     angiogenic factor with G patch and FHA domains 1 (AGGF1)
                     and similar proteins; cd22686"
                     /db_xref="CDD:438738"
     Site            order(437..438,454..455,457,476,478..479)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438738"
     Region          620..661
                     /region_name="G-patch"
                     /note="G-patch domain; pfam01585"
                     /db_xref="CDD:396249"
     CDS             1..714
                     /gene="AGGF1"
                     /coded_by="XM_061158127.1:2..2146"
                     /db_xref="GeneID:133066748"
ORIGIN      
        1 maseappppl spspppspep elaqlrrkve tlerelrsck rqvreiekll hhterlyqsa
       61 esnnqelrtq veelskilhc grnednkksd vevqtenhpp wsisdyyyqt yynevnlpnk
      121 tselsvqedk dveastfnsk dqshiendty agtditenvn fgqedhfasn sqepasalat
      181 entpldgssl aeslraaaea avsqtgfayd entglyfdhs tgfyydsesq lyydpstgiy
      241 yycdvesgry qfhsrvhlqp yqtagtkhgk drklkkrrkd pdssaaseek nlnsedqkis
      301 niehincseg edfanvkkka kidihyknsp pkytvpvrak tvespvneni ytlasfkdek
      361 iidtdsepee geitdsqted sydeditsed nataedtede deekiwppci rvivirspvl
      421 qtgslfiita vnpatigrek dmehtlripe vgvskfhaei yfdhdlqsyv lvdqgsqngt
      481 vvngkqilqp ktkcdpyvle hgdevkiget vlsfhihpgs dtcdgcepgq vrahlrldkk
      541 delfagptls keekelerrk elkkirvkyg lqntdyedek alknpkykdr agkrreqigs
      601 egtfqrddap asvhseitds nkgrkmlekm gwkkgeglgk dgggmktpiq lqlrrthagl
      661 gtgkpssied vhllqnkskk nwekarerfa enfpetksqk dapgtvpwvk gpve
//
LOCUS       XP_061014112             652 aa            linear   MAM 02-DEC-2023
DEFINITION  angiogenic factor with G patch and FHA domains 1 isoform X2 [Dama
            dama].
ACCESSION   XP_061014112
VERSION     XP_061014112.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158129.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..652
                     /product="angiogenic factor with G patch and FHA domains 1
                     isoform X2"
                     /calculated_mol_wt=73500
     Region          138..191
                     /region_name="OCRE_VG5Q"
                     /note="OCRE domain found in angiogenic factor VG5Q and
                     similar proteins; cd16164"
                     /db_xref="CDD:293883"
     Region          143..150
                     /region_name="OCRE repeat 1"
                     /note="OCRE repeat 1 [structural motif]"
                     /db_xref="CDD:293883"
     Region          151..158
                     /region_name="OCRE repeat 2"
                     /note="OCRE repeat 2 [structural motif]"
                     /db_xref="CDD:293883"
     Region          159..166
                     /region_name="OCRE repeat 3"
                     /note="OCRE repeat 3 [structural motif]"
                     /db_xref="CDD:293883"
     Region          167..173
                     /region_name="OCRE repeat 4"
                     /note="OCRE repeat 4 [structural motif]"
                     /db_xref="CDD:293883"
     Region          176..183
                     /region_name="OCRE repeat 5"
                     /note="OCRE repeat 5 [structural motif]"
                     /db_xref="CDD:293883"
     Region          344..467
                     /region_name="FHA_AGGF1"
                     /note="forkhead associated (FHA) domain found in
                     angiogenic factor with G patch and FHA domains 1 (AGGF1)
                     and similar proteins; cd22686"
                     /db_xref="CDD:438738"
     Site            order(375..376,392..393,395,414,416..417)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438738"
     Region          558..599
                     /region_name="G-patch"
                     /note="G-patch domain; pfam01585"
                     /db_xref="CDD:396249"
     CDS             1..652
                     /gene="AGGF1"
                     /coded_by="XM_061158129.1:626..2584"
                     /db_xref="GeneID:133066748"
ORIGIN      
        1 merlnnkkve elskilhcgr nednkksdve vqtenhppws isdyyyqtyy nevnlpnkts
       61 elsvqedkdv eastfnskdq shiendtyag tditenvnfg qedhfasnsq epasalaten
      121 tpldgsslae slraaaeaav sqtgfayden tglyfdhstg fyydsesqly ydpstgiyyy
      181 cdvesgryqf hsrvhlqpyq tagtkhgkdr klkkrrkdpd ssaaseeknl nsedqkisni
      241 ehincseged fanvkkkaki dihyknsppk ytvpvraktv espvneniyt lasfkdekii
      301 dtdsepeege itdsqtedsy deditsedna taedtedede ekiwppcirv ivirspvlqt
      361 gslfiitavn patigrekdm ehtlripevg vskfhaeiyf dhdlqsyvlv dqgsqngtvv
      421 ngkqilqpkt kcdpyvlehg devkigetvl sfhihpgsdt cdgcepgqvr ahlrldkkde
      481 lfagptlske ekelerrkel kkirvkyglq ntdyedekal knpkykdrag krreqigseg
      541 tfqrddapas vhseitdsnk grkmlekmgw kkgeglgkdg ggmktpiqlq lrrthaglgt
      601 gkpssiedvh llqnkskknw ekarerfaen fpetksqkda pgtvpwvkgp ve
//
LOCUS       XP_061014113             149 aa            linear   MAM 02-DEC-2023
DEFINITION  calmodulin-1 [Dama dama].
ACCESSION   XP_061014113
VERSION     XP_061014113.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158130.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..149
                     /product="calmodulin-1"
                     /calculated_mol_wt=16706
     Region          1..149
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..149
                     /gene="LOC133066749"
                     /coded_by="XM_061158130.1:65..514"
                     /db_xref="GeneID:133066749"
ORIGIN      
        1 madqlteeqi aefkeafslf dkdgdgtitt kelgtvmrsl gqnpteaelq dminevdadg
       61 ngtidfpefl tmmarkmkdt dseeeireaf rvfdkdgngy isaaelrhvm tnlgekltde
      121 evdemiread idgdgqvnye efvqmmtak
//
LOCUS       XP_061014114             397 aa            linear   MAM 02-DEC-2023
DEFINITION  proteinase-activated receptor 2 isoform X1 [Dama dama].
ACCESSION   XP_061014114
VERSION     XP_061014114.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158131.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..397
                     /product="proteinase-activated receptor 2 isoform X1"
                     /calculated_mol_wt=43927
     Region          76..355
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          78..102
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          111..132
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          149..171
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          193..209
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          240..263
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          286..308
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          323..348
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..397
                     /gene="F2RL1"
                     /coded_by="XM_061158131.1:162..1355"
                     /db_xref="GeneID:133066750"
ORIGIN      
        1 mrsrsaawll ggvlllaasa scnrtvpgnk rlskgrslig smdkspvvsg rgvtvkpgfs
       61 vdefstsvlt gklttvflpv vytivfvvgl psngmalwvf lfrtkkkhpa viymanlala
      121 dllsvtwfpl kiayhihgnn wtygeslckv ligffygnmy csilfmtcls vqrywvivnp
      181 mvhpkkqani aigvslgiwl lillltiply vvkqtayipa lnittchdvl peevlvgdmf
      241 nyflslaigv flfpafltas ayvlmirtlq ssamdessgk krrraikliv tvlamylicf
      301 tpsnlllvvh yfliktwgqs hvyalyival clstlnscid pfvyyfisqd frdhaknall
      361 crsvrtvkqm qvslsskkfs gksssyssss tsvkgsy
//
LOCUS       XP_061014115             356 aa            linear   MAM 02-DEC-2023
DEFINITION  proteinase-activated receptor 2 isoform X2 [Dama dama].
ACCESSION   XP_061014115
VERSION     XP_061014115.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158132.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..356
                     /product="proteinase-activated receptor 2 isoform X2"
                     /calculated_mol_wt=39689
     Region          35..314
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          37..61
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          70..91
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          108..130
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          152..168
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          199..222
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          245..267
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          282..307
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..356
                     /gene="F2RL1"
                     /coded_by="XM_061158132.1:474..1544"
                     /db_xref="GeneID:133066750"
ORIGIN      
        1 mdkspvvsgr gvtvkpgfsv defstsvltg klttvflpvv ytivfvvglp sngmalwvfl
       61 frtkkkhpav iymanlalad llsvtwfplk iayhihgnnw tygeslckvl igffygnmyc
      121 silfmtclsv qrywvivnpm vhpkkqania igvslgiwll illltiplyv vkqtayipal
      181 nittchdvlp eevlvgdmfn yflslaigvf lfpafltasa yvlmirtlqs samdessgkk
      241 rrraiklivt vlamylicft psnlllvvhy fliktwgqsh vyalyivalc lstlnscidp
      301 fvyyfisqdf rdhaknallc rsvrtvkqmq vslsskkfsg ksssysssst svkgsy
//
LOCUS       XP_061014116             356 aa            linear   MAM 02-DEC-2023
DEFINITION  proteinase-activated receptor 2 isoform X2 [Dama dama].
ACCESSION   XP_061014116
VERSION     XP_061014116.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158133.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..356
                     /product="proteinase-activated receptor 2 isoform X2"
                     /calculated_mol_wt=39689
     Region          35..314
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          37..61
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          70..91
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          108..130
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          152..168
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          199..222
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          245..267
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          282..307
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..356
                     /gene="F2RL1"
                     /coded_by="XM_061158133.1:3011..4081"
                     /db_xref="GeneID:133066750"
ORIGIN      
        1 mdkspvvsgr gvtvkpgfsv defstsvltg klttvflpvv ytivfvvglp sngmalwvfl
       61 frtkkkhpav iymanlalad llsvtwfplk iayhihgnnw tygeslckvl igffygnmyc
      121 silfmtclsv qrywvivnpm vhpkkqania igvslgiwll illltiplyv vkqtayipal
      181 nittchdvlp eevlvgdmfn yflslaigvf lfpafltasa yvlmirtlqs samdessgkk
      241 rrraiklivt vlamylicft psnlllvvhy fliktwgqsh vyalyivalc lstlnscidp
      301 fvyyfisqdf rdhaknallc rsvrtvkqmq vslsskkfsg ksssysssst svkgsy
//
LOCUS       XP_061014117             356 aa            linear   MAM 02-DEC-2023
DEFINITION  proteinase-activated receptor 2 isoform X2 [Dama dama].
ACCESSION   XP_061014117
VERSION     XP_061014117.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158134.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..356
                     /product="proteinase-activated receptor 2 isoform X2"
                     /calculated_mol_wt=39689
     Region          35..314
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          37..61
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          70..91
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          108..130
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          152..168
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          199..222
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          245..267
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          282..307
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..356
                     /gene="F2RL1"
                     /coded_by="XM_061158134.1:710..1780"
                     /db_xref="GeneID:133066750"
ORIGIN      
        1 mdkspvvsgr gvtvkpgfsv defstsvltg klttvflpvv ytivfvvglp sngmalwvfl
       61 frtkkkhpav iymanlalad llsvtwfplk iayhihgnnw tygeslckvl igffygnmyc
      121 silfmtclsv qrywvivnpm vhpkkqania igvslgiwll illltiplyv vkqtayipal
      181 nittchdvlp eevlvgdmfn yflslaigvf lfpafltasa yvlmirtlqs samdessgkk
      241 rrraiklivt vlamylicft psnlllvvhy fliktwgqsh vyalyivalc lstlnscidp
      301 fvyyfisqdf rdhaknallc rsvrtvkqmq vslsskkfsg ksssysssst svkgsy
//
LOCUS       XP_061014118             356 aa            linear   MAM 02-DEC-2023
DEFINITION  proteinase-activated receptor 2 isoform X2 [Dama dama].
ACCESSION   XP_061014118
VERSION     XP_061014118.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158135.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..356
                     /product="proteinase-activated receptor 2 isoform X2"
                     /calculated_mol_wt=39689
     Region          35..314
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          37..61
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          70..91
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          108..130
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          152..168
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          199..222
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          245..267
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          282..307
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..356
                     /gene="F2RL1"
                     /coded_by="XM_061158135.1:947..2017"
                     /db_xref="GeneID:133066750"
ORIGIN      
        1 mdkspvvsgr gvtvkpgfsv defstsvltg klttvflpvv ytivfvvglp sngmalwvfl
       61 frtkkkhpav iymanlalad llsvtwfplk iayhihgnnw tygeslckvl igffygnmyc
      121 silfmtclsv qrywvivnpm vhpkkqania igvslgiwll illltiplyv vkqtayipal
      181 nittchdvlp eevlvgdmfn yflslaigvf lfpafltasa yvlmirtlqs samdessgkk
      241 rrraiklivt vlamylicft psnlllvvhy fliktwgqsh vyalyivalc lstlnscidp
      301 fvyyfisqdf rdhaknallc rsvrtvkqmq vslsskkfsg ksssysssst svkgsy
//
LOCUS       XP_061014119             356 aa            linear   MAM 02-DEC-2023
DEFINITION  proteinase-activated receptor 2 isoform X2 [Dama dama].
ACCESSION   XP_061014119
VERSION     XP_061014119.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158136.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..356
                     /product="proteinase-activated receptor 2 isoform X2"
                     /calculated_mol_wt=39689
     Region          35..314
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          37..61
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          70..91
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          108..130
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          152..168
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          199..222
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          245..267
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          282..307
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..356
                     /gene="F2RL1"
                     /coded_by="XM_061158136.1:156..1226"
                     /db_xref="GeneID:133066750"
ORIGIN      
        1 mdkspvvsgr gvtvkpgfsv defstsvltg klttvflpvv ytivfvvglp sngmalwvfl
       61 frtkkkhpav iymanlalad llsvtwfplk iayhihgnnw tygeslckvl igffygnmyc
      121 silfmtclsv qrywvivnpm vhpkkqania igvslgiwll illltiplyv vkqtayipal
      181 nittchdvlp eevlvgdmfn yflslaigvf lfpafltasa yvlmirtlqs samdessgkk
      241 rrraiklivt vlamylicft psnlllvvhy fliktwgqsh vyalyivalc lstlnscidp
      301 fvyyfisqdf rdhaknallc rsvrtvkqmq vslsskkfsg ksssysssst svkgsy
//
LOCUS       XP_061014120             325 aa            linear   MAM 02-DEC-2023
DEFINITION  corticotropin-releasing factor-binding protein [Dama dama].
ACCESSION   XP_061014120
VERSION     XP_061014120.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158137.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..325
                     /product="corticotropin-releasing factor-binding protein"
                     /calculated_mol_wt=36136
     Region          10..310
                     /region_name="CRF-BP"
                     /note="Corticotropin-releasing factor binding protein
                     (CRF-BP); pfam05428"
                     /db_xref="CDD:461650"
     CDS             1..325
                     /gene="CRHBP"
                     /coded_by="XM_061158137.1:1955..2932"
                     /db_xref="GeneID:133066751"
ORIGIN      
        1 maptfklqgh fvlicllalr gesrylelre avdhdpfahl ggggaspkre legaplyrra
       61 lrcvdmlslq gqftftadrp qlhcatffia epeefitiry dlvsidcqrg dilqvfdgwi
      121 lkgekfpssq dhplpttery idfcesglsr rsirssqnva miffrihepg ngftitmttd
      181 pnlfpcniis qtpngrftlv vphlhrncsf siiypvaiki sdltlghlng lqlkkssagc
      241 ggvgdfvell ggtgldpskm llladlcypl rgpaqmkvgc dhtvvrmvss gkhinrvtfe
      301 yrqlepyele npngnsiqef clstl
//
LOCUS       XP_061014121             325 aa            linear   MAM 02-DEC-2023
DEFINITION  corticotropin-releasing factor-binding protein [Dama dama].
ACCESSION   XP_061014121
VERSION     XP_061014121.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158138.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..325
                     /product="corticotropin-releasing factor-binding protein"
                     /calculated_mol_wt=36136
     Region          10..310
                     /region_name="CRF-BP"
                     /note="Corticotropin-releasing factor binding protein
                     (CRF-BP); pfam05428"
                     /db_xref="CDD:461650"
     CDS             1..325
                     /gene="CRHBP"
                     /coded_by="XM_061158138.1:2219..3196"
                     /db_xref="GeneID:133066751"
ORIGIN      
        1 maptfklqgh fvlicllalr gesrylelre avdhdpfahl ggggaspkre legaplyrra
       61 lrcvdmlslq gqftftadrp qlhcatffia epeefitiry dlvsidcqrg dilqvfdgwi
      121 lkgekfpssq dhplpttery idfcesglsr rsirssqnva miffrihepg ngftitmttd
      181 pnlfpcniis qtpngrftlv vphlhrncsf siiypvaiki sdltlghlng lqlkkssagc
      241 ggvgdfvell ggtgldpskm llladlcypl rgpaqmkvgc dhtvvrmvss gkhinrvtfe
      301 yrqlepyele npngnsiqef clstl
//
LOCUS       XP_061014122             325 aa            linear   MAM 02-DEC-2023
DEFINITION  corticotropin-releasing factor-binding protein [Dama dama].
ACCESSION   XP_061014122
VERSION     XP_061014122.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158139.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..325
                     /product="corticotropin-releasing factor-binding protein"
                     /calculated_mol_wt=36136
     Region          10..310
                     /region_name="CRF-BP"
                     /note="Corticotropin-releasing factor binding protein
                     (CRF-BP); pfam05428"
                     /db_xref="CDD:461650"
     CDS             1..325
                     /gene="CRHBP"
                     /coded_by="XM_061158139.1:2309..3286"
                     /db_xref="GeneID:133066751"
ORIGIN      
        1 maptfklqgh fvlicllalr gesrylelre avdhdpfahl ggggaspkre legaplyrra
       61 lrcvdmlslq gqftftadrp qlhcatffia epeefitiry dlvsidcqrg dilqvfdgwi
      121 lkgekfpssq dhplpttery idfcesglsr rsirssqnva miffrihepg ngftitmttd
      181 pnlfpcniis qtpngrftlv vphlhrncsf siiypvaiki sdltlghlng lqlkkssagc
      241 ggvgdfvell ggtgldpskm llladlcypl rgpaqmkvgc dhtvvrmvss gkhinrvtfe
      301 yrqlepyele npngnsiqef clstl
//
LOCUS       XP_061014123             427 aa            linear   MAM 02-DEC-2023
DEFINITION  proteinase-activated receptor 1 [Dama dama].
ACCESSION   XP_061014123
VERSION     XP_061014123.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158140.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..427
                     /product="proteinase-activated receptor 1"
                     /calculated_mol_wt=46396
     Region          105..384
                     /region_name="7tmA_PAR1"
                     /note="protease-activated receptor 1, member of the class
                     A family of seven-transmembrane G protein-coupled
                     receptors; cd15369"
                     /db_xref="CDD:320491"
     Region          105..132
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320491"
     Region          139..164
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320491"
     Site            order(160,163..164,177..182,184..185,188,233,235..239,
                     256..259,269,272..274,276..278,280..281,328,331..332,
                     334..335,338,351..352,354..356,359,362..363)
                     /site_type="other"
                     /note="putative peptide ligand binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:320491"
     Region          177..207
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320491"
     Region          221..239
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320491"
     Region          269..298
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320491"
     Region          308..338
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320491"
     Region          352..377
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320491"
     CDS             1..427
                     /gene="F2R"
                     /coded_by="XM_061158140.1:79..1362"
                     /db_xref="GeneID:133066755"
ORIGIN      
        1 mgprclllwa aglglcsplv sagtrgprte seatngtlgp rsfflrnhdd gyeliplhdg
       61 edssegefte grlssgnrss ppqksslpfi ssaasgylts awltvfvpsv ytgvflvslp
      121 lnvvaalvfv lkmkvkkpav vymlhlavad vlfvcvlpfk isyyfsgsdw rfgsalcrfv
      181 taafygnmya simlmtaisv drflavvypi qslswrtlgr asfvclaiwa maiagvvpll
      241 lqeqaarvpa lnittchdvl nqtllegyys yyfsafaavf fflplflstv cyvsiircls
      301 sskvanqskk sralllsaav fcvfilcfgp tnvllllhya flspdsvtea ayfayllcvc
      361 vssisccidp liyyyassec qrhlsailcc kqsadpsscn ssgqlmpskl dtcstnlsss
      421 lykkllt
//
LOCUS       XP_061014124            1575 aa            linear   MAM 02-DEC-2023
DEFINITION  ras GTPase-activating-like protein IQGAP2 [Dama dama].
ACCESSION   XP_061014124
VERSION     XP_061014124.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158141.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1575
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1575
                     /product="ras GTPase-activating-like protein IQGAP2"
                     /calculated_mol_wt=181199
     Region          11..166
                     /region_name="CH_IQGAP2"
                     /note="calponin homology (CH) domain found in Ras
                     GTPase-activating-like protein IQGAP2; cd21275"
                     /db_xref="CDD:409124"
     Site            order(43,47,108,110..111,114..115,117,127..135,141,
                     143..144,146..147,150..151,154)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409124"
     Region          <784..1575
                     /region_name="IQG1"
                     /note="Protein involved in regulation of cellular
                     morphogenesis/cytokinesis [Cell division and chromosome
                     partitioning / Signal transduction mechanisms]; COG5261"
                     /db_xref="CDD:227586"
     Region          916..1274
                     /region_name="RasGAP_IQGAP2"
                     /note="Ras-GTPase Activating Domain of IQ motif containing
                     GTPase activating protein 2; cd05131"
                     /db_xref="CDD:213333"
     Site            order(960,991,993,995..996,999,1002,1006,1098,1106..1107,
                     1110..1111,1114,1139,1142..1143,1146,1150,1152,1157..1158)
                     /site_type="other"
                     /note="putative RAS interface [polypeptide binding]"
                     /db_xref="CDD:213333"
     CDS             1..1575
                     /gene="IQGAP2"
                     /coded_by="XM_061158141.1:97..4824"
                     /db_xref="GeneID:133066756"
ORIGIN      
        1 mphedqpslq rprygsivdd erlsaeemde rrrqniayey lchleeakrw mevclveelp
       61 ptteleeglr ngvylaklak ffapkmvsek kiydveqtry kksglhfrht dntvqwlram
      121 eavglpkify pettdvydrk niprmiycih alslylfklg iapqiqdllg kvdfteeeis
      181 nmrkelekyg iqmpafskig gilanelsvd eaalhaavia ineaiakgia eqtiitlrnp
      241 navltlvddd laeeyqkelw eakkrkeena rlknncisee erdayeellt qaeiqgnink
      301 vnrlaavdhi naviregdpe ntllalqkpe aqlpvvypfa aamyqnelfn lqkqnamnyl
      361 aheelliave mlsavallnq alessdlvsv qnqlrsptig fnnldetcve ryanallcik
      421 lealsqgqds lswneiqnci dmvnieiqee ndrvvavgyi neaidegdpl ktldslllpt
      481 akiknvdpdf arhyqdvlyq aktqkymdpq saskilwlde iqhavneank dinsakqwvt
      541 lvvdvnqfle kekqsdilsv lkpavgntnd vipecadryh dalakakeqk srsvstegsw
      601 lkvtlqekyd yyynidskes swvtpepcll keswlmgkei ediveditad yireniwsat
      661 edmlqrfqat tsgplirkey earkaflyeq eepvvkiqaf wkaykqreay krrrqmfidn
      721 irfivkiqsw yrmvtarkny lsrlqffrdh nneivkiqsl lraskarddy ktlvgsenpp
      781 lrvirkfvyl ldqsdldfqe elevarlree vvtkirgnqq lekdlnlmdi kigllvknri
      841 tledvishrt klnkkkggem eilnnidnqg ikslskerrk tletyqqlfy llqtnpsyla
      901 klifqmpqnk stkfmdtvif tlynyasnqr eeylllklfk taleeeiask vdqvqdivtg
      961 nptvikmvvs fnrgargqnt lrqllapvvk eiiddkslii ntspvevyka wvnqletqtg
     1021 easnlpydvt teqaltypev rarleasieh lrrvtdqvls siisslhllp yglryiakvl
     1081 knsihekfpd atedellkiv gnllyyrymn paivapdgfd iidmtaggqi npdqrrnlgs
     1141 vakvlqhaas nklfegeneh lssmnnylse tyqefrkyfk eacnvpepee kfnmdkytdv
     1201 vtvskpviyi sieeiinths lllehqdaia pekndllnel lelleevpnv esflgegavd
     1261 pndpdkvntl nqlakteisl yltskynigd geaidgqslm iktkkliidv irnqpgstlt
     1321 eiletpasak qetdhasdmv nravldsrtp edmkqgqsmv edaqlpleqk krkiqrnlrt
     1381 leqtghvssk nkyqdilnki akdirnqrvh rklrkaelek lqqtlnalnk kaaffeeqin
     1441 yydtyiktcl dnlkrkntrr sikldgkgep rgmkrakpvr ytaaklqekg vlldiddlqe
     1501 nqfknvtfdi sstedvgifd vrskflgvem ekvqlniqdl lqmqyegvav mkmfdkvkvn
     1561 vnlliyllnk kfygk
//
LOCUS       XP_061014125             378 aa            linear   MAM 02-DEC-2023
DEFINITION  proteinase-activated receptor 3 [Dama dama].
ACCESSION   XP_061014125
VERSION     XP_061014125.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158142.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..378
                     /product="proteinase-activated receptor 3"
                     /calculated_mol_wt=42808
     Region          95..368
                     /region_name="7tmA_PAR3"
                     /note="protease-activated receptor 3, member of the class
                     A family of seven-transmembrane G protein-coupled
                     receptors; cd15371"
                     /db_xref="CDD:320493"
     Region          95..122
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320493"
     Region          128..153
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320493"
     Site            order(149,152..153,159,166..171,173..174,177,222,224..228,
                     245..247,259,262..264,266..268,270..271,314,317..318,
                     320..321,324,336..337,339..341,344,347..348)
                     /site_type="other"
                     /note="putative peptide ligand binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:320493"
     Region          166..196
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320493"
     Region          208..230
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320493"
     Region          259..288
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320493"
     Region          294..324
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320493"
     Region          337..362
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320493"
     CDS             1..378
                     /gene="F2RL2"
                     /coded_by="XM_061158142.1:197..1333"
                     /db_xref="GeneID:133066757"
ORIGIN      
        1 mravlfaavg alllspascq sgmeydadiv aksilpvksf rgapqnafek fplsaiegwt
       61 gttktvkikc peeldsnlhv nnatmgylss plstklipai yilvfavgmp anavtlwllf
      121 frtrtirmtv fytnlaiadl lfcvtlpfri vyhlngnnwv fgevvcratt vifygnmycs
      181 illlacisin rylaivhpft yrglpkrtya lltcglvwtt vflymlpffi lkqeyylvqq
      241 dittcldvhn tcessssfql yyficlaffg flipflviiy cytaiiwtln akdrrwlwyi
      301 kaslftlvif tvcfapsnii liihhanyyh sdadalyfvy lialclgsln scldpflyfl
      361 mskitdhsta yltmvkss
//
LOCUS       XP_061014126             397 aa            linear   MAM 02-DEC-2023
DEFINITION  dnaJ homolog subfamily A member 1 [Dama dama].
ACCESSION   XP_061014126
VERSION     XP_061014126.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158143.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..397
                     /product="dnaJ homolog subfamily A member 1"
                     /calculated_mol_wt=44751
     Region          2..394
                     /region_name="PTZ00037"
                     /note="DnaJ_C chaperone protein; Provisional"
                     /db_xref="CDD:240236"
     CDS             1..397
                     /gene="LOC133066758"
                     /coded_by="XM_061158143.1:116..1309"
                     /db_xref="GeneID:133066758"
ORIGIN      
        1 mvkettyydv lgvkpnatqe elkkayrkla lkyhpdknpn egekfkqisq ayevlsdakk
       61 relydkggeq aikeggaggg fgspmdifdm ffggggrmqr errgknvvhq ltvtledlyn
      121 gatrklalqk nvicdkcegr ggkkgavecc pncrgtgmqi rihqigpgmv qqiqsvcmec
      181 qghgerispk drckscngrk ivrekkilev hidkgmkdgq kitfhgegdq epglepgdii
      241 ivldqkdhav ftrrgedlfm cmdiqlveal cgfqkpistl dnrtivitsh pgqivkhgdi
      301 kcvlnegmpi yrrpyekgrl iiefkvnfpe ngflspdkls llekllperk eveetdemdq
      361 velvdfdpnq errrhyngea yeddehhprg gvqcqts
//
LOCUS       XP_061014127             725 aa            linear   MAM 02-DEC-2023
DEFINITION  synaptic vesicle glycoprotein 2C [Dama dama].
ACCESSION   XP_061014127
VERSION     XP_061014127.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158144.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..725
                     /product="synaptic vesicle glycoprotein 2C"
                     /calculated_mol_wt=81817
     Region          1..725
                     /region_name="synapt_SV2"
                     /note="synaptic vesicle protein SV2; TIGR01299"
                     /db_xref="CDD:130366"
     CDS             1..725
                     /gene="SV2C"
                     /coded_by="XM_061158144.1:230..2407"
                     /db_xref="GeneID:133066759"
ORIGIN      
        1 medsykdrts lvkgakdiar evkkqtvkkv nqavdraqde ytqrsysrfq deeeddevyp
       61 paetyngean ddegsseate ghdeddeiye geyqgipnmn qgkdsivsvg qpkgdeykdr
      121 qeleserkad eeelaqqyel iiqecghgrf qwalffvlgm almadgvevf vvgfvlpsae
      181 tdlcipnsgs gwlgsivylg mmvgaffwgg ladkvgrkqs llicmsingf faflssfvqg
      241 ygfflfcrll sgfgiggaip tvfsyfaevl arekrgehls wlcmfwmigg iyasamawai
      301 iphygwsfsm gsayqfhswr vfvivcalpc vssvvaltfm pesprfllev gkhdeawmil
      361 klihdtnmra rgqpekvftv nriktprqid elieiesdtg twyrrcfvri rtelqgiwlt
      421 fmrcftypvr entikltivw ftlsfgyygl svwfpdvikh lqsnvlknid epkvkfsdat
      481 inftmanqii tgmecdngrf agirfksitf knsvfksctf edvtsvntyf knctfietvf
      541 nktdfepykf incrfqnstf lynktgcqft fdddysaywi yfvnflgtla vlpgnivsal
      601 lmdrigrltm lggsmvlsgi scfflwfgts esmmigmlcl yngltisawn sldvvtvely
      661 ptdrratgfg flnalckaaa vlgnlifgsl vsitkaipil lastvlvcgg lvglrlpdtr
      721 tqvlm
//
LOCUS       XP_061014128             569 aa            linear   MAM 02-DEC-2023
DEFINITION  centrosomal protein POC5 isoform X1 [Dama dama].
ACCESSION   XP_061014128
VERSION     XP_061014128.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158145.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..569
                     /product="centrosomal protein POC5 isoform X1"
                     /calculated_mol_wt=61795
     Region          <426..>561
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     CDS             1..569
                     /gene="POC5"
                     /coded_by="XM_061158145.1:143..1852"
                     /db_xref="GeneID:133066760"
ORIGIN      
        1 mssdgeirsp pvlqkdsdrd ssvssdlqee yeellryavv tpnteagasq pshskgeavp
       61 dikiptiidd ilqnpgnspa vrktrmevgk gcdlntsvhs ktdgsspasp rkpphpvmdf
      121 fssnllvdss spgsnsspid aheiivtdfv vsdenlqkme nvldlwssgl ktniiselsk
      181 wrlnfidwhr memkkerekh aadvkqlcsq inslkelqkt yevsigrkde visslshaig
      241 kqkerielmr tffhwrinhv ksrqdvyesk ladqyfrrtl lkkawrgwra vvqkqwkevv
      301 eracqaraee vcvqisndye akvallsgal enakaeiqrm qhekehfeds mkkafmrgvc
      361 alnleamtif qnrgdtdftt tkrdeygpgv qgkepppaha daaagavpps ppaaalgatc
      421 aaafpsaasv tsagatsass vhlpvsaphg aglmaaasaq eetygpravt saqqkagrti
      481 taritgrcdf asknrisssl aimgvsppms svvvekhhpv tvqtipqaaa akyprtihpe
      541 ggtsasgslg trtahtqslt sipsikvvd
//
LOCUS       XP_061014129             484 aa            linear   MAM 02-DEC-2023
DEFINITION  centrosomal protein POC5 isoform X2 [Dama dama].
ACCESSION   XP_061014129
VERSION     XP_061014129.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158146.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..484
                     /product="centrosomal protein POC5 isoform X2"
                     /calculated_mol_wt=52578
     Region          <341..>476
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     CDS             1..484
                     /gene="POC5"
                     /coded_by="XM_061158146.1:377..1831"
                     /db_xref="GeneID:133066760"
ORIGIN      
        1 mevgkgcdln tsvhsktdgs spasprkpph pvmdffssnl lvdssspgsn sspidaheii
       61 vtdfvvsden lqkmenvldl wssglktnii selskwrlnf idwhrmemkk erekhaadvk
      121 qlcsqinslk elqktyevsi grkdevissl shaigkqker ielmrtffhw rinhvksrqd
      181 vyeskladqy frrtllkkaw rgwravvqkq wkevveracq araeevcvqi sndyeakval
      241 lsgalenaka eiqrmqheke hfedsmkkaf mrgvcalnle amtifqnrgd tdftttkrde
      301 ygpgvqgkep ppahadaaag avppsppaaa lgatcaaafp saasvtsaga tsassvhlpv
      361 saphgaglma aasaqeetyg pravtsaqqk agrtitarit grcdfasknr issslaimgv
      421 sppmssvvve khhpvtvqti pqaaaakypr tihpeggtsa sgslgtrtah tqsltsipsi
      481 kvvd
//
LOCUS       XP_061014130             878 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA polymerase kappa [Dama dama].
ACCESSION   XP_061014130
VERSION     XP_061014130.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158147.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..878
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..878
                     /product="DNA polymerase kappa"
                     /calculated_mol_wt=98719
     Region          111..523
                     /region_name="PolY_Pol_IV_kappa"
                     /note="DNA Polymerase IV/Kappa; cd03586"
                     /db_xref="CDD:176459"
     Site            order(114..115,117..119,144..145,148,151,205,335)
                     /site_type="active"
                     /db_xref="CDD:176459"
     Site            order(139,160,203,205..206,328,362..368,397..398,421..428,
                     452,475..478,480,514..515,519,522)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176459"
     Region          629..654
                     /region_name="ZnF_Rad18"
                     /note="Rad18-like CCHC zinc finger; smart00734"
                     /db_xref="CDD:128973"
     Region          785..810
                     /region_name="ZnF_Rad18"
                     /note="Rad18-like CCHC zinc finger; smart00734"
                     /db_xref="CDD:128973"
     CDS             1..878
                     /gene="POLK"
                     /coded_by="XM_061158147.1:28..2664"
                     /db_xref="GeneID:133066762"
ORIGIN      
        1 mdstkensds akeksdnyrd dlllrmglnd nkagmegldk ekinkiimea tkgsrfygne
       61 lkkekqvnqr ienmlqqkaq itnqqlrkaq lqvdrfamel eqsrdlnsti vhidmdafya
      121 avemrdnpel kdkpiavgsm nmlstsnyha rrfgvraamp gfiakrlcpq liivppnfdk
      181 yqavsrevke iltdydpnfm amsldeayln itkhleerkn wpedkrkyfi tagtslendn
      241 pgkevnklse lgrsispllf edsppdlqsp gnpfqvnsee pnnpqiyqns vvfgtsaeev
      301 vkeirfrieq kttltasagi apntmlakvc sdknkpngqy qilpnrqavm dfikdlpirk
      361 vsgigkvtek mlkalgiitc telyqqrall sllfsetswh hflhislglg sthlardger
      421 ksrsvertfs eiskaeeqys lcqelcsela qdlqkeglkg rtvtiklknv nfevktrast
      481 vstvvstaee ifviakellr teidadfphp lrlrlmgvrl sgfpneeekk hqqrsiigfl
      541 qpgnqalstt scilektdkd qflkpaqmsh kksffdkkrs erkaspqdtf tcetvnkqsl
      601 qtsqssqvln kkmsenlemv ekshncqtft cpvcfreqgs isleafnkhv dacldgpsis
      661 gnpkmsscsh assaevneke nvygsvslce krgyethqen teitsvdpve lvettgkpsn
      721 tddvgalsnk pseeecsgps sksfnmehcp qnsctvslen edvgslrrqe spqpnlyevi
      781 sdqvlvcpvc nleqktsdlt lfnvhvdvcl nkgiiqelrk dkinpcnqpk estkstdnsg
      841 kvqktgnkak rpglmtkysa skktrpnnpr htldvffk
//
LOCUS       XP_061014131             878 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA polymerase kappa [Dama dama].
ACCESSION   XP_061014131
VERSION     XP_061014131.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158148.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..878
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..878
                     /product="DNA polymerase kappa"
                     /calculated_mol_wt=98719
     Region          111..523
                     /region_name="PolY_Pol_IV_kappa"
                     /note="DNA Polymerase IV/Kappa; cd03586"
                     /db_xref="CDD:176459"
     Site            order(114..115,117..119,144..145,148,151,205,335)
                     /site_type="active"
                     /db_xref="CDD:176459"
     Site            order(139,160,203,205..206,328,362..368,397..398,421..428,
                     452,475..478,480,514..515,519,522)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176459"
     Region          629..654
                     /region_name="ZnF_Rad18"
                     /note="Rad18-like CCHC zinc finger; smart00734"
                     /db_xref="CDD:128973"
     Region          785..810
                     /region_name="ZnF_Rad18"
                     /note="Rad18-like CCHC zinc finger; smart00734"
                     /db_xref="CDD:128973"
     CDS             1..878
                     /gene="POLK"
                     /coded_by="XM_061158148.1:143..2779"
                     /db_xref="GeneID:133066762"
ORIGIN      
        1 mdstkensds akeksdnyrd dlllrmglnd nkagmegldk ekinkiimea tkgsrfygne
       61 lkkekqvnqr ienmlqqkaq itnqqlrkaq lqvdrfamel eqsrdlnsti vhidmdafya
      121 avemrdnpel kdkpiavgsm nmlstsnyha rrfgvraamp gfiakrlcpq liivppnfdk
      181 yqavsrevke iltdydpnfm amsldeayln itkhleerkn wpedkrkyfi tagtslendn
      241 pgkevnklse lgrsispllf edsppdlqsp gnpfqvnsee pnnpqiyqns vvfgtsaeev
      301 vkeirfrieq kttltasagi apntmlakvc sdknkpngqy qilpnrqavm dfikdlpirk
      361 vsgigkvtek mlkalgiitc telyqqrall sllfsetswh hflhislglg sthlardger
      421 ksrsvertfs eiskaeeqys lcqelcsela qdlqkeglkg rtvtiklknv nfevktrast
      481 vstvvstaee ifviakellr teidadfphp lrlrlmgvrl sgfpneeekk hqqrsiigfl
      541 qpgnqalstt scilektdkd qflkpaqmsh kksffdkkrs erkaspqdtf tcetvnkqsl
      601 qtsqssqvln kkmsenlemv ekshncqtft cpvcfreqgs isleafnkhv dacldgpsis
      661 gnpkmsscsh assaevneke nvygsvslce krgyethqen teitsvdpve lvettgkpsn
      721 tddvgalsnk pseeecsgps sksfnmehcp qnsctvslen edvgslrrqe spqpnlyevi
      781 sdqvlvcpvc nleqktsdlt lfnvhvdvcl nkgiiqelrk dkinpcnqpk estkstdnsg
      841 kvqktgnkak rpglmtkysa skktrpnnpr htldvffk
//
LOCUS       XP_061014132             878 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA polymerase kappa [Dama dama].
ACCESSION   XP_061014132
VERSION     XP_061014132.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158149.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..878
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..878
                     /product="DNA polymerase kappa"
                     /calculated_mol_wt=98719
     Region          111..523
                     /region_name="PolY_Pol_IV_kappa"
                     /note="DNA Polymerase IV/Kappa; cd03586"
                     /db_xref="CDD:176459"
     Site            order(114..115,117..119,144..145,148,151,205,335)
                     /site_type="active"
                     /db_xref="CDD:176459"
     Site            order(139,160,203,205..206,328,362..368,397..398,421..428,
                     452,475..478,480,514..515,519,522)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176459"
     Region          629..654
                     /region_name="ZnF_Rad18"
                     /note="Rad18-like CCHC zinc finger; smart00734"
                     /db_xref="CDD:128973"
     Region          785..810
                     /region_name="ZnF_Rad18"
                     /note="Rad18-like CCHC zinc finger; smart00734"
                     /db_xref="CDD:128973"
     CDS             1..878
                     /gene="POLK"
                     /coded_by="XM_061158149.1:285..2921"
                     /db_xref="GeneID:133066762"
ORIGIN      
        1 mdstkensds akeksdnyrd dlllrmglnd nkagmegldk ekinkiimea tkgsrfygne
       61 lkkekqvnqr ienmlqqkaq itnqqlrkaq lqvdrfamel eqsrdlnsti vhidmdafya
      121 avemrdnpel kdkpiavgsm nmlstsnyha rrfgvraamp gfiakrlcpq liivppnfdk
      181 yqavsrevke iltdydpnfm amsldeayln itkhleerkn wpedkrkyfi tagtslendn
      241 pgkevnklse lgrsispllf edsppdlqsp gnpfqvnsee pnnpqiyqns vvfgtsaeev
      301 vkeirfrieq kttltasagi apntmlakvc sdknkpngqy qilpnrqavm dfikdlpirk
      361 vsgigkvtek mlkalgiitc telyqqrall sllfsetswh hflhislglg sthlardger
      421 ksrsvertfs eiskaeeqys lcqelcsela qdlqkeglkg rtvtiklknv nfevktrast
      481 vstvvstaee ifviakellr teidadfphp lrlrlmgvrl sgfpneeekk hqqrsiigfl
      541 qpgnqalstt scilektdkd qflkpaqmsh kksffdkkrs erkaspqdtf tcetvnkqsl
      601 qtsqssqvln kkmsenlemv ekshncqtft cpvcfreqgs isleafnkhv dacldgpsis
      661 gnpkmsscsh assaevneke nvygsvslce krgyethqen teitsvdpve lvettgkpsn
      721 tddvgalsnk pseeecsgps sksfnmehcp qnsctvslen edvgslrrqe spqpnlyevi
      781 sdqvlvcpvc nleqktsdlt lfnvhvdvcl nkgiiqelrk dkinpcnqpk estkstdnsg
      841 kvqktgnkak rpglmtkysa skktrpnnpr htldvffk
//
LOCUS       XP_061014133             598 aa            linear   MAM 02-DEC-2023
DEFINITION  ceramide transfer protein isoform X1 [Dama dama].
ACCESSION   XP_061014133
VERSION     XP_061014133.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158150.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..598
                     /product="ceramide transfer protein isoform X1"
                     /calculated_mol_wt=67866
     Region          26..125
                     /region_name="PH_GPBP"
                     /note="Goodpasture antigen binding protein Pleckstrin
                     homology (PH) domain; cd13283"
                     /db_xref="CDD:270100"
     Region          364..598
                     /region_name="START_STARD11-like"
                     /note="Ceramide-binding START domain of mammalian STARD11
                     and related domains; cd08872"
                     /db_xref="CDD:176881"
     Site            order(436,442,445..446,448..449,467,469..470,472..473,475,
                     478,480,482,504,521,523,525,553,557,559,568,571..572,
                     574..576,579)
                     /site_type="other"
                     /note="ceramide binding site [chemical binding]"
                     /db_xref="CDD:176881"
     CDS             1..598
                     /gene="CERT1"
                     /coded_by="XM_061158150.1:127..1923"
                     /db_xref="GeneID:133066763"
ORIGIN      
        1 msdnqswnss gseedpetes gppvercgvl skwtnyihgw qdrwvvlknn tlsyyksede
       61 teygcrgsic lskavitphd fdecrfdisv ndsvwylraq dpdhrqqwvd aieqhktesg
      121 ygsesslrrh gsmvslvsga sgysatstss fkkghslrek laemetfrdi lcrqvdtlqk
      181 ffdacadavs kdelqrdkvv eddeddfptt rsdgdflhnt ngnkekvfph vtpkgingid
      241 fkgeaitfka ttagilatls hcielmvkre dswqkrmdke sekrrrveea yknamtelkk
      301 kshfggpdye egpnslinee effdaveaal drqdkieeqs qsekvrlhws tsmpsgdafs
      361 svgthrfvqk veemvqnhmt yslqdvggda nwqlvveege mkvyrrevee ngivldplka
      421 thavkgvtgh evcnyfwnvd vrndwettie nfhvvetlad naiiiyqthk rvwpasqrdv
      481 lylsairkip alnendpetw ivcnfsvdhs saplnnrcvr akinvalicq tlvsppegnq
      541 eisrdnilck ityvanvnpg gwapasvlra vakreypkfl krftsyvqek tagkpilf
//
LOCUS       XP_061014135             624 aa            linear   MAM 02-DEC-2023
DEFINITION  ceramide transfer protein isoform X2 [Dama dama].
ACCESSION   XP_061014135
VERSION     XP_061014135.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158152.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..624
                     /product="ceramide transfer protein isoform X2"
                     /calculated_mol_wt=70694
     Region          26..125
                     /region_name="PH_GPBP"
                     /note="Goodpasture antigen binding protein Pleckstrin
                     homology (PH) domain; cd13283"
                     /db_xref="CDD:270100"
     Region          391..624
                     /region_name="START_STARD11-like"
                     /note="Ceramide-binding START domain of mammalian STARD11
                     and related domains; cd08872"
                     /db_xref="CDD:176881"
     Site            order(462,468,471..472,474..475,493,495..496,498..499,501,
                     504,506,508,530,547,549,551,579,583,585,594,597..598,
                     600..602,605)
                     /site_type="other"
                     /note="ceramide binding site [chemical binding]"
                     /db_xref="CDD:176881"
     CDS             1..624
                     /gene="CERT1"
                     /coded_by="XM_061158152.1:383..2257"
                     /db_xref="GeneID:133066763"
ORIGIN      
        1 msdnqswnss gseedpetes gppvercgvl skwtnyihgw qdrwvvlknn tlsyyksede
       61 teygcrgsic lskavitphd fdecrfdisv ndsvwylraq dpdhrqqwvd aieqhktesg
      121 ygsesslrrh gsmvslvsga sgysatstss fkkghslrek laemetfrdi lcrqvdtlqk
      181 ffdacadavs kdelqrdkvv eddeddfptt rsdgdflhnt ngnkekvfph vtpkgingid
      241 fkgeaitfka ttagilatls hcielmvkre dswqkrmdke sekrrrveea yknamtelkk
      301 kshfggpdye egpnslinee effdaveaal drqdkieeqs qsekvrlhws tsmpsgdafs
      361 svgthrfvqk pysrsssmss idlvsasddv hrfssqveem vqnhmtyslq dvggdanwql
      421 vveegemkvy rreveengiv ldplkathav kgvtghevcn yfwnvdvrnd wettienfhv
      481 vetladnaii iyqthkrvwp asqrdvlyls airkipalne ndpetwivcn fsvdhssapl
      541 nnrcvrakin valicqtlvs ppegnqeisr dnilckityv anvnpggwap asvlravakr
      601 eypkflkrft syvqektagk pilf
//
LOCUS       XP_061014136             755 aa            linear   MAM 02-DEC-2023
DEFINITION  ceramide transfer protein isoform X3 [Dama dama].
ACCESSION   XP_061014136
VERSION     XP_061014136.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158153.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..755
                     /product="ceramide transfer protein isoform X3"
                     /calculated_mol_wt=83993
     Region          157..256
                     /region_name="PH_GPBP"
                     /note="Goodpasture antigen binding protein Pleckstrin
                     homology (PH) domain; cd13283"
                     /db_xref="CDD:270100"
     Region          522..755
                     /region_name="START_STARD11-like"
                     /note="Ceramide-binding START domain of mammalian STARD11
                     and related domains; cd08872"
                     /db_xref="CDD:176881"
     Site            order(593,599,602..603,605..606,624,626..627,629..630,632,
                     635,637,639,661,678,680,682,710,714,716,725,728..729,
                     731..733,736)
                     /site_type="other"
                     /note="ceramide binding site [chemical binding]"
                     /db_xref="CDD:176881"
     CDS             1..755
                     /gene="CERT1"
                     /coded_by="XM_061158153.1:16..2283"
                     /db_xref="GeneID:133066763"
ORIGIN      
        1 mqhsgvplpp spfsapptfl pgvtregrrg pnsgggagrs agvtatatad gwkgrlpspl
       61 dllprparcq arrrrrrrrg grtpallplp paperallps pspdpsprgl gastgaaqga
      121 gaglllgcra smsdnqswns sgseedpete sgppvercgv lskwtnyihg wqdrwvvlkn
      181 ntlsyyksed eteygcrgsi clskavitph dfdecrfdis vndsvwylra qdpdhrqqwv
      241 daieqhktes gygsesslrr hgsmvslvsg asgysatsts sfkkghslre klaemetfrd
      301 ilcrqvdtlq kffdacadav skdelqrdkv veddeddfpt trsdgdflhn tngnkekvfp
      361 hvtpkgingi dfkgeaitfk attagilatl shcielmvkr edswqkrmdk esekrrrvee
      421 ayknamtelk kkshfggpdy eegpnsline eeffdaveaa ldrqdkieeq sqsekvrlhw
      481 stsmpsgdaf ssvgthrfvq kpysrsssms sidlvsasdd vhrfssqvee mvqnhmtysl
      541 qdvggdanwq lvveegemkv yrreveengi vldplkatha vkgvtghevc nyfwnvdvrn
      601 dwettienfh vvetladnai iiyqthkrvw pasqrdvlyl sairkipaln endpetwivc
      661 nfsvdhssap lnnrcvraki nvalicqtlv sppegnqeis rdnilckity vanvnpggwa
      721 pasvlravak reypkflkrf tsyvqektag kpilf
//
LOCUS       XP_061014137             888 aa            linear   MAM 02-DEC-2023
DEFINITION  3-hydroxy-3-methylglutaryl-Coenzyme A reductase [Dama dama].
ACCESSION   XP_061014137
VERSION     XP_061014137.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158154.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..888
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..888
                     /product="3-hydroxy-3-methylglutaryl-Coenzyme A reductase"
                     /calculated_mol_wt=97566
     Region          1..888
                     /region_name="2A060605"
                     /note="3-hydroxy-3-methylglutaryl-coenzyme A reductase;
                     TIGR00920"
                     /db_xref="CDD:273339"
     CDS             1..888
                     /gene="HMGCR"
                     /coded_by="XM_061158154.1:162..2828"
                     /db_xref="GeneID:133066764"
ORIGIN      
        1 mlsrlfrmhg lfvashpwev ivgtvtltic mmsmnmftgn skicgwnyec pkfeedvlss
       61 diiiltitrc iailyiyfqf qnlrqlgsky ilgiaglfti fssfvfstvv ihfldkeltg
      121 lnealpffll lidlsrasal akfalssnsq devreniarg mavlgptftl dalveclvig
      181 vgtmsgvrql eimccfgcms vlanyfvfmt ffpacvslvl elsresregr piwqlshfar
      241 vleeeenkpn pvtqrvkmim slglvlvhah srwiadpspq nstadnskvs lgldenvskr
      301 ikpsvslwqf ylskmismdi eqvitlslal llavkyiffe qaetestlsl knpitspvvt
      361 qkkvtddccr rdpvlvrndq kfhameeear knrerkvevi kplvaendts nratfvvgns
      421 slldtplele tqepevelpt eprpneeclq ilenaekgak flsdaeiiql vnakhipayk
      481 letlmether gvsirrqlls kklpepsslq ylpyrdynys lvmgaccenv igympipvgv
      541 agplcldgke fqvpmatteg clvastnrgc raiglgggas srvladgmtr gpvvrfprac
      601 dsaevkgwle tpegftvmke afdstsrfar lqklhmsvag rnlyirfqsr sgdamgmnmi
      661 skgtekalck lqeyfpemqi lavsgnyctd kkpaainwie grgksvvcea vipakvvrev
      721 lkttteamie vninknlvgs amagsiggyn ahaanivtai yiacgqdaaq nvgssncitl
      781 measgptned lyisctmpsi eigtvgggtn llpqqaclqm lgvqgacrdn pgenarqlar
      841 ivcgtvmage lslmaalaag hlvrshmihn rskinlqdlq gtcskkaa
//
LOCUS       XP_061014138            1929 aa            linear   MAM 02-DEC-2023
DEFINITION  ankyrin repeat domain-containing protein 31 [Dama dama].
ACCESSION   XP_061014138
VERSION     XP_061014138.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158155.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1929
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1929
                     /product="ankyrin repeat domain-containing protein 31"
                     /calculated_mol_wt=215182
     Region          <489..645
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(497,499,503..504,507..509,511..512,516,519,528,530,
                     532,536..537,540..542,544..545,549,552,561,563,565,
                     569..570,573..575,577..578,582,585)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          497..528
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          530..561
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          563..588
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <1208..1346
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          1215..1245
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(1216,1220..1221,1224..1226,1228..1229,1233,1236,
                     1245,1247,1249,1253..1254,1257..1259,1261..1262,1266,1269,
                     1278,1280,1282,1286..1287,1290..1292,1294..1295,1299,1302,
                     1311)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          1247..1278
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1280..1311
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1742..1844
                     /region_name="RAMA"
                     /note="Restriction Enzyme Adenine Methylase Associated;
                     pfam18755"
                     /db_xref="CDD:465856"
     CDS             1..1929
                     /gene="ANKRD31"
                     /coded_by="XM_061158155.1:171..5960"
                     /db_xref="GeneID:133066765"
ORIGIN      
        1 meegsqaadc gsdgtvvegs vtesdpeeea lpwrrllfnq dtslrsepsl hpskgasspe
       61 iqfgfkfred pweqmsksqt mliliedavl qqpqdemeqn eallqsrksh pvftvsfpqa
      121 elsmnhrssl gpeaespevl typekelsrd respetslls hasdkefdtf alkersliep
      181 ekepgeegtl tmtseenkde essletfvsa lervltspei sreerlfrim ndfeprelan
      241 tlssasssms ipltchrdfl edpkddalpv vvstalntls eakvevichr keggislsvg
      301 necsgvepsm sqtdedctqi aevdfetlcs sppfeqdskl aelqdkhlsv qqissledpn
      361 pfelqtlvhq nvtscdpinn krnsnlvens cdqatphvlr rssrlkvvrd vkptddmykm
      421 penilrrvlg cedhtkhsss agnvrmqnpa lkiegkgktg pssrlrngeq mkknrkraek
      481 mkmnkttlan inrrnifgen llykaavhnd aglvhhyikk ggnvnqpsya gwtalheasl
      541 ggfyqtvsel lkggadvnis gmyqitplhd avinghyqva ellllngadp lfrndngrca
      601 ldeakdsrmm rllerfvpkh qkhltsaqkk sidpsdveda rrhkkpkfss knhsglvyde
      661 nsnrqkpehv evnkgskksl finkdiyehy qkdspnmgig kskqkqsiln qihspgfrkd
      721 nlhgaedpst svskdkgrrn sqhkrthvdd isqessprkt vtvsfsrris asvtrrqqgv
      781 qildnlpeks ckpfsqalpg lknglcndve tcsvpretht qsldlssdsq eikcmevesi
      841 dqaeavsflg lslhektklp lvttdqqpht hqeqehisly kshensnsgq kdeslkwekf
      901 spsfikenfn nddhgdscas eetvmskkvi sssgcknhdn ykenktntee mgfqqflpsq
      961 dhfpqenelk adsltilpqq eavsfsnsdn iivsehvsny eqylcgpsfd hshgspehtp
     1021 lacigtlsth evseltshek lvkkpqdysp siliplmnqa dihivekvnk egdtkrnytd
     1081 tdqetspsnr pssrgvpsqv mettkvekrr qeskairntg fhstdnisee ltnisqlsqk
     1141 ekishkpgee fvngnentir nckgkkekpd seihmltniq shkkiqnfrk rknvskatcs
     1201 qemktsgidk rnatgesrlh vaarrghlsl vkalievgad vnlkdnagwt plhnaaskgw
     1261 sdvivellka sanvncenvd gilplhdava nnhlkaaeil lqhganpnqk dekqktalde
     1321 addenmkell ksygaietnn rdesdavvav kipdvrarrr kqcicddskt vdtpsvshqe
     1381 kteenlsmhq tisailqnie ekqenllefe irtpedaeqy agkmleikev mdnvlakqka
     1441 erddlakkyr asiesfkcgv lreqlanlaa rqkslllvak kqkkisqklh thknapslsg
     1501 lsvgklpsgs eashekdrqe fvrlensvqp qsasvsavsl vcrgmqeaql sqevwhgdqs
     1561 shlclnskta rreevsgsel nfkqdindct ldglsksehs dgtnqiklqs qsvsfiaeae
     1621 ysqeendltg stakgqvsfs psavtsalki sattsvfarh dghpasvicd qapsdcdpne
     1681 gnrktaprqa prgtseslap qgvdvfgsdm gqqlqpyfkk svltvphand sqsssssgsg
     1741 yqhtvkkpsn ysatskkkym qikdlillgr lnpgnnilef ktqeathkas vllsgkikve
     1801 ngqiyqnpvt wlkdllggds yvtwnyawsk ityqgkellk yvseelpvpp dpqqhqpclp
     1861 elpafgsksr geepgcdsfl egtckesiqs vphylqikei qlssdqeflp chimdehwkf
     1921 yveceeltf
//
LOCUS       XP_061014139             467 aa            linear   MAM 02-DEC-2023
DEFINITION  beta-1,3-galactosyl-O-glycosyl-glycoprotein
            beta-1,6-N-acetylglucosaminyltransferase 4 isoform X1 [Dama dama].
ACCESSION   XP_061014139
VERSION     XP_061014139.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158156.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..467
                     /product="beta-1,3-galactosyl-O-glycosyl-glycoprotein
                     beta-1,6-N-acetylglucosaminyltransferase 4 isoform X1"
                     /calculated_mol_wt=54291
     Region          147..415
                     /region_name="Branch"
                     /note="Core-2/I-Branching enzyme; cl27418"
                     /db_xref="CDD:452742"
     CDS             1..467
                     /gene="GCNT4"
                     /coded_by="XM_061158156.1:322..1725"
                     /db_xref="GeneID:133066766"
ORIGIN      
        1 mcllchrpli isgmktfkcc fkfhlqqkvf ilfltlwlfs llkllnvkrf lfpergiylv
       61 eysvstspfv rnrythvkne igyeincsgv yeqepleigk sleirrrtii dlddddvvai
      121 tsdceiyqal rsydeklvse eeknfpiays lvvhkdaimv erlilaiynq hniycihydq
      181 kssdtfkvam nnlakcfsni fiaskletvq yahisrlqad lnclsdllks svqwkyvinl
      241 cgqdfplksn felvselkkl ngsnmletvk ppstkverft yhhelrqapy eyvklpmrtn
      301 iskeapphni eifvgsayfv lsrafikyif nnsfvedffa wskdtyspde hfwatlirvp
      361 gipgeisrta qdvsdlqskt rlvkwnyleg lfypsctgsh lrsvciygta elrwlmkygh
      421 wfankfdskv dpvlikclae kleeqqrkwi tlsseklfka kpsists
//
LOCUS       XP_061014140             454 aa            linear   MAM 02-DEC-2023
DEFINITION  beta-1,3-galactosyl-O-glycosyl-glycoprotein
            beta-1,6-N-acetylglucosaminyltransferase 4 isoform X2 [Dama dama].
ACCESSION   XP_061014140
VERSION     XP_061014140.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158157.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..454
                     /product="beta-1,3-galactosyl-O-glycosyl-glycoprotein
                     beta-1,6-N-acetylglucosaminyltransferase 4 isoform X2"
                     /calculated_mol_wt=52853
     Region          134..402
                     /region_name="Branch"
                     /note="Core-2/I-Branching enzyme; cl27418"
                     /db_xref="CDD:452742"
     CDS             1..454
                     /gene="GCNT4"
                     /coded_by="XM_061158157.1:175..1539"
                     /db_xref="GeneID:133066766"
ORIGIN      
        1 mktfkccfkf hlqqkvfilf ltlwlfsllk llnvkrflfp ergiylveys vstspfvrnr
       61 ythvkneigy eincsgvyeq epleigksle irrrtiidld dddvvaitsd ceiyqalrsy
      121 deklvseeek nfpiayslvv hkdaimverl ilaiynqhni ycihydqkss dtfkvamnnl
      181 akcfsnifia skletvqyah isrlqadlnc lsdllkssvq wkyvinlcgq dfplksnfel
      241 vselkklngs nmletvkpps tkverftyhh elrqapyeyv klpmrtnisk eapphnieif
      301 vgsayfvlsr afikyifnns fvedffawsk dtyspdehfw atlirvpgip geisrtaqdv
      361 sdlqsktrlv kwnyleglfy psctgshlrs vciygtaelr wlmkyghwfa nkfdskvdpv
      421 likclaekle eqqrkwitls seklfkakps ists
//
LOCUS       XP_061014141             454 aa            linear   MAM 02-DEC-2023
DEFINITION  beta-1,3-galactosyl-O-glycosyl-glycoprotein
            beta-1,6-N-acetylglucosaminyltransferase 4 isoform X2 [Dama dama].
ACCESSION   XP_061014141
VERSION     XP_061014141.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158158.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..454
                     /product="beta-1,3-galactosyl-O-glycosyl-glycoprotein
                     beta-1,6-N-acetylglucosaminyltransferase 4 isoform X2"
                     /calculated_mol_wt=52853
     Region          134..402
                     /region_name="Branch"
                     /note="Core-2/I-Branching enzyme; cl27418"
                     /db_xref="CDD:452742"
     CDS             1..454
                     /gene="GCNT4"
                     /coded_by="XM_061158158.1:384..1748"
                     /db_xref="GeneID:133066766"
ORIGIN      
        1 mktfkccfkf hlqqkvfilf ltlwlfsllk llnvkrflfp ergiylveys vstspfvrnr
       61 ythvkneigy eincsgvyeq epleigksle irrrtiidld dddvvaitsd ceiyqalrsy
      121 deklvseeek nfpiayslvv hkdaimverl ilaiynqhni ycihydqkss dtfkvamnnl
      181 akcfsnifia skletvqyah isrlqadlnc lsdllkssvq wkyvinlcgq dfplksnfel
      241 vselkklngs nmletvkpps tkverftyhh elrqapyeyv klpmrtnisk eapphnieif
      301 vgsayfvlsr afikyifnns fvedffawsk dtyspdehfw atlirvpgip geisrtaqdv
      361 sdlqsktrlv kwnyleglfy psctgshlrs vciygtaelr wlmkyghwfa nkfdskvdpv
      421 likclaekle eqqrkwitls seklfkakps ists
//
LOCUS       XP_061014142             454 aa            linear   MAM 02-DEC-2023
DEFINITION  beta-1,3-galactosyl-O-glycosyl-glycoprotein
            beta-1,6-N-acetylglucosaminyltransferase 4 isoform X2 [Dama dama].
ACCESSION   XP_061014142
VERSION     XP_061014142.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158159.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..454
                     /product="beta-1,3-galactosyl-O-glycosyl-glycoprotein
                     beta-1,6-N-acetylglucosaminyltransferase 4 isoform X2"
                     /calculated_mol_wt=52853
     Region          134..402
                     /region_name="Branch"
                     /note="Core-2/I-Branching enzyme; cl27418"
                     /db_xref="CDD:452742"
     CDS             1..454
                     /gene="GCNT4"
                     /coded_by="XM_061158159.1:334..1698"
                     /db_xref="GeneID:133066766"
ORIGIN      
        1 mktfkccfkf hlqqkvfilf ltlwlfsllk llnvkrflfp ergiylveys vstspfvrnr
       61 ythvkneigy eincsgvyeq epleigksle irrrtiidld dddvvaitsd ceiyqalrsy
      121 deklvseeek nfpiayslvv hkdaimverl ilaiynqhni ycihydqkss dtfkvamnnl
      181 akcfsnifia skletvqyah isrlqadlnc lsdllkssvq wkyvinlcgq dfplksnfel
      241 vselkklngs nmletvkpps tkverftyhh elrqapyeyv klpmrtnisk eapphnieif
      301 vgsayfvlsr afikyifnns fvedffawsk dtyspdehfw atlirvpgip geisrtaqdv
      361 sdlqsktrlv kwnyleglfy psctgshlrs vciygtaelr wlmkyghwfa nkfdskvdpv
      421 likclaekle eqqrkwitls seklfkakps ists
//
LOCUS       XP_061014143             454 aa            linear   MAM 02-DEC-2023
DEFINITION  beta-1,3-galactosyl-O-glycosyl-glycoprotein
            beta-1,6-N-acetylglucosaminyltransferase 4 isoform X2 [Dama dama].
ACCESSION   XP_061014143
VERSION     XP_061014143.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158160.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..454
                     /product="beta-1,3-galactosyl-O-glycosyl-glycoprotein
                     beta-1,6-N-acetylglucosaminyltransferase 4 isoform X2"
                     /calculated_mol_wt=52853
     Region          134..402
                     /region_name="Branch"
                     /note="Core-2/I-Branching enzyme; cl27418"
                     /db_xref="CDD:452742"
     CDS             1..454
                     /gene="GCNT4"
                     /coded_by="XM_061158160.1:4182..5546"
                     /db_xref="GeneID:133066766"
ORIGIN      
        1 mktfkccfkf hlqqkvfilf ltlwlfsllk llnvkrflfp ergiylveys vstspfvrnr
       61 ythvkneigy eincsgvyeq epleigksle irrrtiidld dddvvaitsd ceiyqalrsy
      121 deklvseeek nfpiayslvv hkdaimverl ilaiynqhni ycihydqkss dtfkvamnnl
      181 akcfsnifia skletvqyah isrlqadlnc lsdllkssvq wkyvinlcgq dfplksnfel
      241 vselkklngs nmletvkpps tkverftyhh elrqapyeyv klpmrtnisk eapphnieif
      301 vgsayfvlsr afikyifnns fvedffawsk dtyspdehfw atlirvpgip geisrtaqdv
      361 sdlqsktrlv kwnyleglfy psctgshlrs vciygtaelr wlmkyghwfa nkfdskvdpv
      421 likclaekle eqqrkwitls seklfkakps ists
//
LOCUS       XP_061014144             454 aa            linear   MAM 02-DEC-2023
DEFINITION  beta-1,3-galactosyl-O-glycosyl-glycoprotein
            beta-1,6-N-acetylglucosaminyltransferase 4 isoform X2 [Dama dama].
ACCESSION   XP_061014144
VERSION     XP_061014144.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158161.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..454
                     /product="beta-1,3-galactosyl-O-glycosyl-glycoprotein
                     beta-1,6-N-acetylglucosaminyltransferase 4 isoform X2"
                     /calculated_mol_wt=52853
     Region          134..402
                     /region_name="Branch"
                     /note="Core-2/I-Branching enzyme; cl27418"
                     /db_xref="CDD:452742"
     CDS             1..454
                     /gene="GCNT4"
                     /coded_by="XM_061158161.1:1891..3255"
                     /db_xref="GeneID:133066766"
ORIGIN      
        1 mktfkccfkf hlqqkvfilf ltlwlfsllk llnvkrflfp ergiylveys vstspfvrnr
       61 ythvkneigy eincsgvyeq epleigksle irrrtiidld dddvvaitsd ceiyqalrsy
      121 deklvseeek nfpiayslvv hkdaimverl ilaiynqhni ycihydqkss dtfkvamnnl
      181 akcfsnifia skletvqyah isrlqadlnc lsdllkssvq wkyvinlcgq dfplksnfel
      241 vselkklngs nmletvkpps tkverftyhh elrqapyeyv klpmrtnisk eapphnieif
      301 vgsayfvlsr afikyifnns fvedffawsk dtyspdehfw atlirvpgip geisrtaqdv
      361 sdlqsktrlv kwnyleglfy psctgshlrs vciygtaelr wlmkyghwfa nkfdskvdpv
      421 likclaekle eqqrkwitls seklfkakps ists
//
LOCUS       XP_061014145             454 aa            linear   MAM 02-DEC-2023
DEFINITION  beta-1,3-galactosyl-O-glycosyl-glycoprotein
            beta-1,6-N-acetylglucosaminyltransferase 4 isoform X2 [Dama dama].
ACCESSION   XP_061014145
VERSION     XP_061014145.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158162.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..454
                     /product="beta-1,3-galactosyl-O-glycosyl-glycoprotein
                     beta-1,6-N-acetylglucosaminyltransferase 4 isoform X2"
                     /calculated_mol_wt=52853
     Region          134..402
                     /region_name="Branch"
                     /note="Core-2/I-Branching enzyme; cl27418"
                     /db_xref="CDD:452742"
     CDS             1..454
                     /gene="GCNT4"
                     /coded_by="XM_061158162.1:224..1588"
                     /db_xref="GeneID:133066766"
ORIGIN      
        1 mktfkccfkf hlqqkvfilf ltlwlfsllk llnvkrflfp ergiylveys vstspfvrnr
       61 ythvkneigy eincsgvyeq epleigksle irrrtiidld dddvvaitsd ceiyqalrsy
      121 deklvseeek nfpiayslvv hkdaimverl ilaiynqhni ycihydqkss dtfkvamnnl
      181 akcfsnifia skletvqyah isrlqadlnc lsdllkssvq wkyvinlcgq dfplksnfel
      241 vselkklngs nmletvkpps tkverftyhh elrqapyeyv klpmrtnisk eapphnieif
      301 vgsayfvlsr afikyifnns fvedffawsk dtyspdehfw atlirvpgip geisrtaqdv
      361 sdlqsktrlv kwnyleglfy psctgshlrs vciygtaelr wlmkyghwfa nkfdskvdpv
      421 likclaekle eqqrkwitls seklfkakps ists
//
LOCUS       XP_061014146             454 aa            linear   MAM 02-DEC-2023
DEFINITION  beta-1,3-galactosyl-O-glycosyl-glycoprotein
            beta-1,6-N-acetylglucosaminyltransferase 4 isoform X2 [Dama dama].
ACCESSION   XP_061014146
VERSION     XP_061014146.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158163.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..454
                     /product="beta-1,3-galactosyl-O-glycosyl-glycoprotein
                     beta-1,6-N-acetylglucosaminyltransferase 4 isoform X2"
                     /calculated_mol_wt=52853
     Region          134..402
                     /region_name="Branch"
                     /note="Core-2/I-Branching enzyme; cl27418"
                     /db_xref="CDD:452742"
     CDS             1..454
                     /gene="GCNT4"
                     /coded_by="XM_061158163.1:131..1495"
                     /db_xref="GeneID:133066766"
ORIGIN      
        1 mktfkccfkf hlqqkvfilf ltlwlfsllk llnvkrflfp ergiylveys vstspfvrnr
       61 ythvkneigy eincsgvyeq epleigksle irrrtiidld dddvvaitsd ceiyqalrsy
      121 deklvseeek nfpiayslvv hkdaimverl ilaiynqhni ycihydqkss dtfkvamnnl
      181 akcfsnifia skletvqyah isrlqadlnc lsdllkssvq wkyvinlcgq dfplksnfel
      241 vselkklngs nmletvkpps tkverftyhh elrqapyeyv klpmrtnisk eapphnieif
      301 vgsayfvlsr afikyifnns fvedffawsk dtyspdehfw atlirvpgip geisrtaqdv
      361 sdlqsktrlv kwnyleglfy psctgshlrs vciygtaelr wlmkyghwfa nkfdskvdpv
      421 likclaekle eqqrkwitls seklfkakps ists
//
LOCUS       XP_061014147             454 aa            linear   MAM 02-DEC-2023
DEFINITION  beta-1,3-galactosyl-O-glycosyl-glycoprotein
            beta-1,6-N-acetylglucosaminyltransferase 4 isoform X2 [Dama dama].
ACCESSION   XP_061014147
VERSION     XP_061014147.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158164.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..454
                     /product="beta-1,3-galactosyl-O-glycosyl-glycoprotein
                     beta-1,6-N-acetylglucosaminyltransferase 4 isoform X2"
                     /calculated_mol_wt=52853
     Region          134..402
                     /region_name="Branch"
                     /note="Core-2/I-Branching enzyme; cl27418"
                     /db_xref="CDD:452742"
     CDS             1..454
                     /gene="GCNT4"
                     /coded_by="XM_061158164.1:96..1460"
                     /db_xref="GeneID:133066766"
ORIGIN      
        1 mktfkccfkf hlqqkvfilf ltlwlfsllk llnvkrflfp ergiylveys vstspfvrnr
       61 ythvkneigy eincsgvyeq epleigksle irrrtiidld dddvvaitsd ceiyqalrsy
      121 deklvseeek nfpiayslvv hkdaimverl ilaiynqhni ycihydqkss dtfkvamnnl
      181 akcfsnifia skletvqyah isrlqadlnc lsdllkssvq wkyvinlcgq dfplksnfel
      241 vselkklngs nmletvkpps tkverftyhh elrqapyeyv klpmrtnisk eapphnieif
      301 vgsayfvlsr afikyifnns fvedffawsk dtyspdehfw atlirvpgip geisrtaqdv
      361 sdlqsktrlv kwnyleglfy psctgshlrs vciygtaelr wlmkyghwfa nkfdskvdpv
      421 likclaekle eqqrkwitls seklfkakps ists
//
LOCUS       XP_061014148             454 aa            linear   MAM 02-DEC-2023
DEFINITION  beta-1,3-galactosyl-O-glycosyl-glycoprotein
            beta-1,6-N-acetylglucosaminyltransferase 4 isoform X2 [Dama dama].
ACCESSION   XP_061014148
VERSION     XP_061014148.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158165.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..454
                     /product="beta-1,3-galactosyl-O-glycosyl-glycoprotein
                     beta-1,6-N-acetylglucosaminyltransferase 4 isoform X2"
                     /calculated_mol_wt=52853
     Region          134..402
                     /region_name="Branch"
                     /note="Core-2/I-Branching enzyme; cl27418"
                     /db_xref="CDD:452742"
     CDS             1..454
                     /gene="GCNT4"
                     /coded_by="XM_061158165.1:4023..5387"
                     /db_xref="GeneID:133066766"
ORIGIN      
        1 mktfkccfkf hlqqkvfilf ltlwlfsllk llnvkrflfp ergiylveys vstspfvrnr
       61 ythvkneigy eincsgvyeq epleigksle irrrtiidld dddvvaitsd ceiyqalrsy
      121 deklvseeek nfpiayslvv hkdaimverl ilaiynqhni ycihydqkss dtfkvamnnl
      181 akcfsnifia skletvqyah isrlqadlnc lsdllkssvq wkyvinlcgq dfplksnfel
      241 vselkklngs nmletvkpps tkverftyhh elrqapyeyv klpmrtnisk eapphnieif
      301 vgsayfvlsr afikyifnns fvedffawsk dtyspdehfw atlirvpgip geisrtaqdv
      361 sdlqsktrlv kwnyleglfy psctgshlrs vciygtaelr wlmkyghwfa nkfdskvdpv
      421 likclaekle eqqrkwitls seklfkakps ists
//
LOCUS       XP_061014149             322 aa            linear   MAM 02-DEC-2023
DEFINITION  sideroflexin-1 [Dama dama].
ACCESSION   XP_061014149
VERSION     XP_061014149.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158166.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..322
                     /product="sideroflexin-1"
                     /calculated_mol_wt=35519
     Region          10..322
                     /region_name="SFXNs"
                     /note="Sideroflexins; pfam03820"
                     /db_xref="CDD:461063"
     CDS             1..322
                     /gene="SFXN1"
                     /coded_by="XM_061158166.1:104..1072"
                     /db_xref="GeneID:133066768"
ORIGIN      
        1 msgelppnin ikeprwdqst figrakhfft vtdprnillt neqleaarkv vhdyrqgivp
       61 sgltenelwr akyiydsafh pdtgekmili grmsaqvpmn mtitgcmmtf yrttpavlfw
      121 qwinqsfnav vnytnrsgda pltvnelgta yvsattgava talglnaltk hvspligrfv
      181 pfaavaaanc iniplmrqre lkvgipvtde ngnrlgesan aakqaitqvv vsrilmaapg
      241 maippfimnt lekkaflkrf pwmsapvqvg ivgfclvfat plccalfpqk ssmsvtslea
      301 elqarireth pelrrvyfnk gl
//
LOCUS       XP_061014150             422 aa            linear   MAM 02-DEC-2023
DEFINITION  histamine H2 receptor isoform X1 [Dama dama].
ACCESSION   XP_061014150
VERSION     XP_061014150.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158167.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..422
                     /product="histamine H2 receptor isoform X1"
                     /calculated_mol_wt=46556
     Region          34..299
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          54..76
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320179"
     Region          92..114
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320179"
     Region          137..153
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320179"
     Region          180..203
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320179"
     Region          233..255
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320179"
     Region          267..292
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320179"
     CDS             1..422
                     /gene="HRH2"
                     /coded_by="XM_061158167.1:629..1897"
                     /db_xref="GeneID:133066769"
ORIGIN      
        1 masngtasss cldpaafkvt vtvvltllil itiagnvvvc lavglnrrlr sltncfivsl
       61 aitdlllgll vlpfsafhql scqwsfgkvf cdiytsldvm lctasilnlf misldrycav
      121 tdplrypvlv tpvrvavslv liwvisitls flsihlewns rpennsdsht tpkckvqvnl
      181 vyglvdglvt fylpllimci tyyrifriar eqarrihnvg pwraatlreh katvtlaavm
      241 gafivcwfpy ftvfvyrglq gdsavdktve dvvlwlgyan salnpvlyaa lnrdfrtayq
      301 elfrcgpash earrtslgsn ssqlvrhasq gpswpeerpl rlqvwsgtev aapqgatdrn
      361 parsgtaysr nllscckslw alrflqrrgg gpweeqpgap pseeppatpa qqsvrtlpse
      421 tv
//
LOCUS       XP_061014151             422 aa            linear   MAM 02-DEC-2023
DEFINITION  histamine H2 receptor isoform X1 [Dama dama].
ACCESSION   XP_061014151
VERSION     XP_061014151.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158168.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..422
                     /product="histamine H2 receptor isoform X1"
                     /calculated_mol_wt=46556
     Region          34..299
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          54..76
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320179"
     Region          92..114
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320179"
     Region          137..153
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320179"
     Region          180..203
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320179"
     Region          233..255
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320179"
     Region          267..292
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320179"
     CDS             1..422
                     /gene="HRH2"
                     /coded_by="XM_061158168.1:1079..2347"
                     /db_xref="GeneID:133066769"
ORIGIN      
        1 masngtasss cldpaafkvt vtvvltllil itiagnvvvc lavglnrrlr sltncfivsl
       61 aitdlllgll vlpfsafhql scqwsfgkvf cdiytsldvm lctasilnlf misldrycav
      121 tdplrypvlv tpvrvavslv liwvisitls flsihlewns rpennsdsht tpkckvqvnl
      181 vyglvdglvt fylpllimci tyyrifriar eqarrihnvg pwraatlreh katvtlaavm
      241 gafivcwfpy ftvfvyrglq gdsavdktve dvvlwlgyan salnpvlyaa lnrdfrtayq
      301 elfrcgpash earrtslgsn ssqlvrhasq gpswpeerpl rlqvwsgtev aapqgatdrn
      361 parsgtaysr nllscckslw alrflqrrgg gpweeqpgap pseeppatpa qqsvrtlpse
      421 tv
//
LOCUS       XP_061014152             384 aa            linear   MAM 02-DEC-2023
DEFINITION  histamine H2 receptor isoform X2 [Dama dama].
ACCESSION   XP_061014152
VERSION     XP_061014152.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158169.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..384
                     /product="histamine H2 receptor isoform X2"
                     /calculated_mol_wt=42677
     Region          34..299
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          54..76
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320179"
     Region          92..114
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320179"
     Region          137..153
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320179"
     Region          180..203
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320179"
     Region          233..255
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320179"
     Region          267..292
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320179"
     CDS             1..384
                     /gene="HRH2"
                     /coded_by="XM_061158169.1:3698..4852"
                     /db_xref="GeneID:133066769"
ORIGIN      
        1 masngtasss cldpaafkvt vtvvltllil itiagnvvvc lavglnrrlr sltncfivsl
       61 aitdlllgll vlpfsafhql scqwsfgkvf cdiytsldvm lctasilnlf misldrycav
      121 tdplrypvlv tpvrvavslv liwvisitls flsihlewns rpennsdsht tpkckvqvnl
      181 vyglvdglvt fylpllimci tyyrifriar eqarrihnvg pwraatlreh katvtlaavm
      241 gafivcwfpy ftvfvyrglq gdsavdktve dvvlwlgyan salnpvlyaa lnrdfrtayq
      301 elfrcgpash earrtslgsn ssqlvrhasq gpswpeerpl rlqvwsgtev aapqgatdrs
      361 lltlfsarqk sylmnscryw lsts
//
LOCUS       XP_061014153             334 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133066770 [Dama dama].
ACCESSION   XP_061014153
VERSION     XP_061014153.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158170.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..334
                     /product="uncharacterized protein LOC133066770"
                     /calculated_mol_wt=35045
     CDS             1..334
                     /gene="LOC133066770"
                     /coded_by="XM_061158170.1:757..1761"
                     /db_xref="GeneID:133066770"
ORIGIN      
        1 meqtacarrg grrrrgegdv aaeargqsdv keltprssva prsqkrqgdg fsheasgrtp
       61 pyphlnpsll vsqksreeic vasshqvhsh llqrpslgsy pslfpaeava ftqqgqwsrg
      121 geagglgskm grgdegrgeg ghlgparaeh pageeaagrp lspgvspwlt vprpcpppdr
      181 hhhqprapgp lvvisilcqv sagfcaqvgs rkdtqsvire agsqpyegsh kspitraast
      241 gnatpgflnt hshnhirgpp agspppppvp saprllhvtq agppsqlala arvavtvgrg
      301 gghslpaacr aprghsvtgl lfllllrswl wlhh
//
LOCUS       XP_061014154             351 aa            linear   MAM 02-DEC-2023
DEFINITION  THO complex subunit 3 [Dama dama].
ACCESSION   XP_061014154
VERSION     XP_061014154.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158171.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..351
                     /product="THO complex subunit 3"
                     /calculated_mol_wt=38695
     Region          <49..305
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          59..97
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          102..139
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          145..180
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          185..221
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          227..263
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          269..295
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..351
                     /gene="THOC3"
                     /coded_by="XM_061158171.1:83..1138"
                     /db_xref="GeneID:133066772"
ORIGIN      
        1 maippasmgp salgqsgpgs mapwcsvssg ptryvlgmqe lfrghsktre fpahsakvhs
       61 vawscdgrrl asgsfdktas vfllekdrlv kennyrghgd svdqlcwhps npdlfvtasg
      121 dktiriwdvr ttkciatvnt kgeninicws pdgqtiavgn kddvvtfida kthrskaeeq
      181 fkfevneisw nndnnmfflt ngngcinils ypelkpvqsi nahpsncici kfdpmgkyfa
      241 tgsadalvsl wdvdelvcvr cfsrldwpvr tlsfshdgkm lasasedhfi diaevetgdk
      301 lwevqcespt ftvawhpkrp llafacddkd gkydssreag tvklfglpnd s
//
LOCUS       XP_061014155             965 aa            linear   MAM 02-DEC-2023
DEFINITION  SUMO-interacting motif-containing protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061014155
VERSION     XP_061014155.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158172.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..965
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..965
                     /product="SUMO-interacting motif-containing protein 1
                     isoform X1"
                     /calculated_mol_wt=107418
     Region          <101..>334
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     Region          <224..>406
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     CDS             1..965
                     /gene="SIMC1"
                     /coded_by="XM_061158172.1:99..2996"
                     /db_xref="GeneID:133066774"
ORIGIN      
        1 medfivisdd sdsessggtr sgrarrlrra lsrtpgalpr rtvdkfllev rllslkdvid
       61 ltretrprak drsglcvidl tgseeenrpi atldltlepv apsqkepasl qacaslsske
      121 itegwmdrss rpaarriins dpvdldllee tafegpqlpm stsgdsfypv epncsstifk
      181 gdlsflanlq pssnihslpq tsnnssssnq rialpcpqqd vpyppqalpc plraspcppr
      241 asscpprals cpsqtmqyql qtfprlpqee pcppqdmpcp qnvpgpqqdm lgpphdsswh
      301 pqrsasppqh slglpqdvpg ppqntscled vahlqdmpqs lgdmpqtpqd tpqssgdmpq
      361 sprdmppslv smlqppadts qspvntppsp ghapalpgda ppslasvphs srdvarlsgn
      421 vlhspgdmsc lledmpptvg phlpkirpas pqnhiqnhdt pmdvsapssp ssspspqspe
      481 fetslekvpw isatenpark erslsepvnp gcalmqaqip qgglynrpcl hrlkyflrpp
      541 vhhlffqtli pdkdtrenkg qklepiphrr lrmvastiee nfplgtvqfl mdfvspqhyp
      601 preivahiiq killsgsetv gvlkeaymll mkiqqlhpan aktvewdwkl layvmeeegq
      661 nlpgrvfflr yvvqtleddf qqilrrqrqh lqqaiastvl scdkqphnvr dvikwlirav
      721 tedrliqppn enqtspgkgi lktssshpss qpnltknanq livcqlqrml siavevdrtp
      781 tcssnkiaem mfgfvldipe rsqremfftt meshllrckv leiiflhsce tptrlplsla
      841 qalyflnnst sllkcqsdkt qwqkwdelve hlqfllssyq hvlrehlrss vidrkdliik
      901 rikpkpqqgd disvvdvekq ieafrsrlvh mlgeplvpql qdkvhllkll lffaadlnpd
      961 seasp
//
LOCUS       XP_061014156             952 aa            linear   MAM 02-DEC-2023
DEFINITION  SUMO-interacting motif-containing protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061014156
VERSION     XP_061014156.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158173.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..952
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..952
                     /product="SUMO-interacting motif-containing protein 1
                     isoform X2"
                     /calculated_mol_wt=105862
     Region          <88..>321
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     Region          <211..>393
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     CDS             1..952
                     /gene="SIMC1"
                     /coded_by="XM_061158173.1:99..2957"
                     /db_xref="GeneID:133066774"
ORIGIN      
        1 medfivisdd sdsessggtr sgrarrlrra lsrtpgalpr rtvdvidltr etrprakdrs
       61 glcvidltgs eeenrpiatl dltlepvaps qkepaslqac aslsskeite gwmdrssrpa
      121 arriinsdpv dldlleetaf egpqlpmsts gdsfypvepn csstifkgdl sflanlqpss
      181 nihslpqtsn nssssnqria lpcpqqdvpy ppqalpcplr aspcpprass cppralscps
      241 qtmqyqlqtf prlpqeepcp pqdmpcpqnv pgpqqdmlgp phdsswhpqr sasppqhslg
      301 lpqdvpgppq ntscledvah lqdmpqslgd mpqtpqdtpq ssgdmpqspr dmppslvsml
      361 qppadtsqsp vntppspgha palpgdapps lasvphssrd varlsgnvlh spgdmsclle
      421 dmpptvgphl pkirpaspqn hiqnhdtpmd vsapsspsss pspqspefet slekvpwisa
      481 tenparkers lsepvnpgca lmqaqipqgg lynrpclhrl kyflrppvhh lffqtlipdk
      541 dtrenkgqkl epiphrrlrm vastieenfp lgtvqflmdf vspqhyppre ivahiiqkil
      601 lsgsetvgvl keaymllmki qqlhpanakt vewdwkllay vmeeegqnlp grvfflryvv
      661 qtleddfqqi lrrqrqhlqq aiastvlscd kqphnvrdvi kwliravted rliqppnenq
      721 tspgkgilkt ssshpssqpn ltknanqliv cqlqrmlsia vevdrtptcs snkiaemmfg
      781 fvldipersq remffttmes hllrckvlei iflhscetpt rlplslaqal yflnnstsll
      841 kcqsdktqwq kwdelvehlq fllssyqhvl rehlrssvid rkdliikrik pkpqqgddis
      901 vvdvekqiea frsrlvhmlg eplvpqlqdk vhllklllff aadlnpdsea sp
//
LOCUS       XP_061014157             305 aa            linear   MAM 02-DEC-2023
DEFINITION  putative monooxygenase p33MONOX isoform X1 [Dama dama].
ACCESSION   XP_061014157
VERSION     XP_061014157.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158174.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..305
                     /product="putative monooxygenase p33MONOX isoform X1"
                     /calculated_mol_wt=32859
     Region          15..305
                     /region_name="P33MONOX"
                     /note="P33 mono-oxygenase; pfam15302"
                     /db_xref="CDD:464628"
     CDS             1..305
                     /gene="KIAA1191"
                     /coded_by="XM_061158174.1:310..1227"
                     /db_xref="GeneID:133066775"
ORIGIN      
        1 masrqpevpa lepsgplgkm slpigmyrra fsyddaledp tpmtpppsdm gsipwkpvip
       61 erkyqhlakq veegepgvsl rapappsasd sekapvvkak athvimssli tkqtqesiqr
      121 feqqaglrda gytphkgltt eetkylrvae alhklklqsg etareerqpa stqstpsssp
      181 qaspkqktrg wftsgpstal pgpslstmds gsgdkdrsst dkwslfgprp lqksesggfa
      241 iqayrgaqkp spmevmraqa arsgeepaas kppkmdipvt egtrqlprah slkprdlnvl
      301 tptgf
//
LOCUS       XP_061014158             305 aa            linear   MAM 02-DEC-2023
DEFINITION  putative monooxygenase p33MONOX isoform X1 [Dama dama].
ACCESSION   XP_061014158
VERSION     XP_061014158.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158175.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..305
                     /product="putative monooxygenase p33MONOX isoform X1"
                     /calculated_mol_wt=32859
     Region          15..305
                     /region_name="P33MONOX"
                     /note="P33 mono-oxygenase; pfam15302"
                     /db_xref="CDD:464628"
     CDS             1..305
                     /gene="KIAA1191"
                     /coded_by="XM_061158175.1:394..1311"
                     /db_xref="GeneID:133066775"
ORIGIN      
        1 masrqpevpa lepsgplgkm slpigmyrra fsyddaledp tpmtpppsdm gsipwkpvip
       61 erkyqhlakq veegepgvsl rapappsasd sekapvvkak athvimssli tkqtqesiqr
      121 feqqaglrda gytphkgltt eetkylrvae alhklklqsg etareerqpa stqstpsssp
      181 qaspkqktrg wftsgpstal pgpslstmds gsgdkdrsst dkwslfgprp lqksesggfa
      241 iqayrgaqkp spmevmraqa arsgeepaas kppkmdipvt egtrqlprah slkprdlnvl
      301 tptgf
//
LOCUS       XP_061014160             304 aa            linear   MAM 02-DEC-2023
DEFINITION  putative monooxygenase p33MONOX isoform X2 [Dama dama].
ACCESSION   XP_061014160
VERSION     XP_061014160.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158177.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..304
                     /product="putative monooxygenase p33MONOX isoform X2"
                     /calculated_mol_wt=32731
     Region          15..304
                     /region_name="P33MONOX"
                     /note="P33 mono-oxygenase; pfam15302"
                     /db_xref="CDD:464628"
     CDS             1..304
                     /gene="KIAA1191"
                     /coded_by="XM_061158177.1:310..1224"
                     /db_xref="GeneID:133066775"
ORIGIN      
        1 masrqpevpa lepsgplgkm slpigmyrra fsyddaledp tpmtpppsdm gsipwkpvip
       61 erkyqhlakv eegepgvslr apappsasds ekapvvkaka thvimsslit kqtqesiqrf
      121 eqqaglrdag ytphkgltte etkylrvaea lhklklqsge tareerqpas tqstpssspq
      181 aspkqktrgw ftsgpstalp gpslstmdsg sgdkdrsstd kwslfgprpl qksesggfai
      241 qayrgaqkps pmevmraqaa rsgeepaask ppkmdipvte gtrqlprahs lkprdlnvlt
      301 ptgf
//
LOCUS       XP_061014161             286 aa            linear   MAM 02-DEC-2023
DEFINITION  putative monooxygenase p33MONOX isoform X3 [Dama dama].
ACCESSION   XP_061014161
VERSION     XP_061014161.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158178.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..286
                     /product="putative monooxygenase p33MONOX isoform X3"
                     /calculated_mol_wt=30913
     Region          1..286
                     /region_name="P33MONOX"
                     /note="P33 mono-oxygenase; pfam15302"
                     /db_xref="CDD:464628"
     CDS             1..286
                     /gene="KIAA1191"
                     /coded_by="XM_061158178.1:386..1246"
                     /db_xref="GeneID:133066775"
ORIGIN      
        1 mslpigmyrr afsyddaled ptpmtpppsd mgsipwkpvi perkyqhlak qveegepgvs
       61 lrapappsas dsekapvvka kathvimssl itkqtqesiq rfeqqaglrd agytphkglt
      121 teetkylrva ealhklklqs getareerqp astqstpsss pqaspkqktr gwftsgpsta
      181 lpgpslstmd sgsgdkdrss tdkwslfgpr plqksesggf aiqayrgaqk pspmevmraq
      241 aarsgeepaa skppkmdipv tegtrqlpra hslkprdlnv ltptgf
//
LOCUS       XP_061014162             286 aa            linear   MAM 02-DEC-2023
DEFINITION  putative monooxygenase p33MONOX isoform X3 [Dama dama].
ACCESSION   XP_061014162
VERSION     XP_061014162.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158179.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..286
                     /product="putative monooxygenase p33MONOX isoform X3"
                     /calculated_mol_wt=30913
     Region          1..286
                     /region_name="P33MONOX"
                     /note="P33 mono-oxygenase; pfam15302"
                     /db_xref="CDD:464628"
     CDS             1..286
                     /gene="KIAA1191"
                     /coded_by="XM_061158179.1:281..1141"
                     /db_xref="GeneID:133066775"
ORIGIN      
        1 mslpigmyrr afsyddaled ptpmtpppsd mgsipwkpvi perkyqhlak qveegepgvs
       61 lrapappsas dsekapvvka kathvimssl itkqtqesiq rfeqqaglrd agytphkglt
      121 teetkylrva ealhklklqs getareerqp astqstpsss pqaspkqktr gwftsgpsta
      181 lpgpslstmd sgsgdkdrss tdkwslfgpr plqksesggf aiqayrgaqk pspmevmraq
      241 aarsgeepaa skppkmdipv tegtrqlpra hslkprdlnv ltptgf
//
LOCUS       XP_061014163             286 aa            linear   MAM 02-DEC-2023
DEFINITION  putative monooxygenase p33MONOX isoform X3 [Dama dama].
ACCESSION   XP_061014163
VERSION     XP_061014163.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158180.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..286
                     /product="putative monooxygenase p33MONOX isoform X3"
                     /calculated_mol_wt=30913
     Region          1..286
                     /region_name="P33MONOX"
                     /note="P33 mono-oxygenase; pfam15302"
                     /db_xref="CDD:464628"
     CDS             1..286
                     /gene="KIAA1191"
                     /coded_by="XM_061158180.1:168..1028"
                     /db_xref="GeneID:133066775"
ORIGIN      
        1 mslpigmyrr afsyddaled ptpmtpppsd mgsipwkpvi perkyqhlak qveegepgvs
       61 lrapappsas dsekapvvka kathvimssl itkqtqesiq rfeqqaglrd agytphkglt
      121 teetkylrva ealhklklqs getareerqp astqstpsss pqaspkqktr gwftsgpsta
      181 lpgpslstmd sgsgdkdrss tdkwslfgpr plqksesggf aiqayrgaqk pspmevmraq
      241 aarsgeepaa skppkmdipv tegtrqlpra hslkprdlnv ltptgf
//
LOCUS       XP_061014164             193 aa            linear   MAM 02-DEC-2023
DEFINITION  AP-3 complex subunit sigma-1 [Dama dama].
ACCESSION   XP_061014164
VERSION     XP_061014164.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158181.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..193
                     /product="AP-3 complex subunit sigma-1"
                     /calculated_mol_wt=21601
     Region          1..146
                     /region_name="AP3_sigma"
                     /note="AP-3 complex subunit sigma; cd14834"
                     /db_xref="CDD:341438"
     Site            order(9..10,15,68..71,94..95,98,103..107)
                     /site_type="other"
                     /note="dileucine motif interface [polypeptide binding]"
                     /db_xref="CDD:341438"
     Site            order(14..17,19..20,45..49,80..85,87..89,92,103,110..112,
                     117..118,121..122,125..136)
                     /site_type="other"
                     /note="putative AP-3 delta interface [polypeptide
                     binding]"
                     /db_xref="CDD:341438"
     Site            order(26,30,34,37,51..53,60)
                     /site_type="other"
                     /note="putative AP-3 mu interface [polypeptide binding]"
                     /db_xref="CDD:341438"
     CDS             1..193
                     /gene="AP3S1"
                     /coded_by="XM_061158181.1:124..705"
                     /db_xref="GeneID:133066776"
ORIGIN      
        1 mikailifnn hgkprlskfy qpysedtqqq iiretfhlvs krdenvcnfl egglliggsd
       61 nkliyrhyat lyfvfcvdss eselgildli qvfvetldkc fenvceldli fhvdkvhnil
      121 aemvmggmvl etnmneivtq idaqnkleks eaglagapar avsavknmnl peiprninig
      181 disikvpnlp sfk
//
LOCUS       XP_061014165             140 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin-like protein ATG12 [Dama dama].
ACCESSION   XP_061014165
VERSION     XP_061014165.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158182.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..140
                     /product="ubiquitin-like protein ATG12"
                     /calculated_mol_wt=15078
     Region          54..139
                     /region_name="Ubl_ATG12"
                     /note="ubiquitin-like (Ubl) domain found in
                     autophagy-related protein 12 (ATG12); cd01612"
                     /db_xref="CDD:340454"
     Site            order(54,56..57,59,68,70,72..76,79,83..84,87..88,90..91,
                     93)
                     /site_type="other"
                     /note="Atg12;
                     Atg5-Atg16-Atg3 interaction site [polypeptide binding]"
                     /db_xref="CDD:340454"
     Site            order(60,69)
                     /site_type="other"
                     /note="key conserved lysines"
                     /db_xref="CDD:340454"
     Site            order(108..109,111..115,118,121..123,139)
                     /site_type="other"
                     /note="Atg5 conjugation site [polypeptide binding]"
                     /db_xref="CDD:340454"
     CDS             1..140
                     /gene="ATG12"
                     /coded_by="XM_061158182.1:265..687"
                     /db_xref="GeneID:133066777"
ORIGIN      
        1 maeeqesalq lppstapeae gptevspeta tpeppssaav spgteepvgd tkkkidillk
       61 avgdtpimkt kkwavertrt iqglidfikk flklvaseql fiyvnqsfap spdqevgtly
      121 ecfgsdgklv lhycksqawg
//
LOCUS       XP_061014166             403 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein uL3-like [Dama dama].
ACCESSION   XP_061014166
VERSION     XP_061014166.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158183.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..403
                     /product="large ribosomal subunit protein uL3-like"
                     /calculated_mol_wt=46037
     Region          1..400
                     /region_name="PTZ00103"
                     /note="60S ribosomal protein L3; Provisional"
                     /db_xref="CDD:240267"
     CDS             1..403
                     /gene="LOC133066778"
                     /coded_by="XM_061158183.1:25..1236"
                     /db_xref="GeneID:133066778"
ORIGIN      
        1 mshrkfsapr hgslgflprk rssrhrgkvk sfpkddsskp vhltaflgyk agmthivrev
       61 drpgskvnkk evveavtive tppmvivgiv gyvetprvlr tfktifaehi sdkckrrfyk
      121 nwhkskkkaf tkyckkwqdv dgkkqlerdf ssmkkycqvi rviahtqmrl lplhqkkahl
      181 meiqvnggtv aekldwarer leqqvpvnqv fgqdemidvi gvtkgkgykg vtsrwhtkkl
      241 prkthqglrk vacigvwhpa rvafsvarag qkgyhhrtei nkkiykigqg ylikdgklik
      301 nnastdydls dksinplggf vhygevtndf vmlkgrvvgt kkrvltlrks llvqtkrral
      361 ekidlkfidt tskfghgrfq tveekkafmg plkkdriake ega
//
LOCUS       XP_061014167             402 aa            linear   MAM 02-DEC-2023
DEFINITION  TIR domain-containing adapter molecule 2-like [Dama dama].
ACCESSION   XP_061014167
VERSION     XP_061014167.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158184.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..402
                     /product="TIR domain-containing adapter molecule 2-like"
                     /calculated_mol_wt=45726
     Region          37..191
                     /region_name="EMP24_GP25L"
                     /note="emp24/gp25L/p24 family/GOLD; pfam01105"
                     /db_xref="CDD:426051"
     Region          248..367
                     /region_name="TIR_2"
                     /note="TIR domain; pfam13676"
                     /db_xref="CDD:463954"
     CDS             1..402
                     /gene="LOC133066779"
                     /coded_by="XM_061158184.1:228..1436"
                     /db_xref="GeneID:133066779"
ORIGIN      
        1 mpwlgsaprw aaaagrwgcr llvlllflvp gpggaseitf elpdnakqcf yeditqgtkc
       61 tlefqvitgg hydvdcrled pdgnvlykem kkqydsytft askngtykfc fsnefstfth
      121 ktvyfdfqvg edpplfpsen rvsaltqmes acvsihealk svidyqthfr lreaqgrsra
      181 edlntrvayw ssvdpsqsrp tldskqsedi clrgdavcss paempageqd gveerleedt
      241 eeevflkfvi lhaeedtgea lrvqsllend fgikpgiifa empcgrqhlq nlddavngsa
      301 wtillltenf lrdtwckfqf ysslmnsvnr qhkynsvipm rplnkplpre rtpfalrtin
      361 aleeesrgfp tqverifqes vyriqqaiwk etrntvqrqs va
//
LOCUS       XP_061014168             523 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 112 isoform X1 [Dama dama].
ACCESSION   XP_061014168
VERSION     XP_061014168.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158185.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..523
                     /product="coiled-coil domain-containing protein 112
                     isoform X1"
                     /calculated_mol_wt=60326
     Region          <298..>476
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     CDS             1..523
                     /gene="CCDC112"
                     /coded_by="XM_061158185.1:6..1577"
                     /db_xref="GeneID:133066781"
ORIGIN      
        1 maalttvvva aaatavagav agagaspgtg vgaavpqqnd gcpgtsggir pfqlqnwkqk
       61 vsrtkkaefi rtaekfknqv inlekdkhsh fynqksdfri ehsmleelen klinsrkter
      121 akiqqqlaki ynnvkklqhq lkdakptpdf veklremmee ienaintfke eqrliyeeli
      181 keekttsnev saisrkldtw avgdpgaeka lraapgklpa drvtpsalpe avaefetflq
      241 qtggrqggwd dydhqnfvka rtkhkgkpaf mgevlehlpg rtqdevqqhe kwyqkflale
      301 erkkesiqhw ktkkqqkmee ifklkekdsi qvlshnkqed nqkqkeeqrk kqklaieawk
      361 kqrsiemamk sasqlkeeee kekqqqrarq rqcklkllle tytqqkqeqa eflrleketr
      421 ektekaerrk taadeisrfq erdlhklelk ilnrqlkede kaekqrklak lkekvennvs
      481 rdpsrlykpt kgweertkki gpagsgpllh iphraiptwr qgv
//
LOCUS       XP_061014169             496 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 112 isoform X2 [Dama dama].
ACCESSION   XP_061014169
VERSION     XP_061014169.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158186.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..496
                     /product="coiled-coil domain-containing protein 112
                     isoform X2"
                     /calculated_mol_wt=58386
     Region          <271..>449
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     CDS             1..496
                     /gene="CCDC112"
                     /coded_by="XM_061158186.1:46..1536"
                     /db_xref="GeneID:133066781"
ORIGIN      
        1 mpdsynpklc qndgcpgtsg girpfqlqnw kqkvsrtkka efirtaekfk nqvinlekdk
       61 hshfynqksd friehsmlee lenklinsrk terakiqqql akiynnvkkl qhqlkdakpt
      121 pdfveklrem meeienaint fkeeqrliye elikeektts nevsaisrkl dtwavgdpga
      181 ekalraapgk lpadrvtpsa lpeavaefet flqqtggrqg gwddydhqnf vkartkhkgk
      241 pafmgevleh lpgrtqdevq qhekwyqkfl aleerkkesi qhwktkkqqk meeifklkek
      301 dsiqvlshnk qednqkqkee qrkkqklaie awkkqrsiem amksasqlke eeekekqqqr
      361 arqrqcklkl lletytqqkq eqaeflrlek etrektekae rrktaadeis rfqerdlhkl
      421 elkilnrqlk edekaekqrk laklkekven nvsrdpsrly kptkgweert kkigpagsgp
      481 llhiphraip twrqgv
//
LOCUS       XP_061014170             617 aa            linear   MAM 02-DEC-2023
DEFINITION  protein fem-1 homolog C [Dama dama].
ACCESSION   XP_061014170
VERSION     XP_061014170.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158187.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..617
                     /product="protein fem-1 homolog C"
                     /calculated_mol_wt=68474
     Region          1..284
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          40..75
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          82..113
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          118..146
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(121..122,125..127,129..130,134,137,146,148,150,
                     154..155,158..160,162..163,167,170,179,181,183,187..188,
                     191..193,195..196,200,203)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          148..179
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          181..209
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <478..>579
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          481..525
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          527..558
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..617
                     /gene="FEM1C"
                     /coded_by="XM_061158187.1:347..2200"
                     /db_xref="GeneID:133066782"
ORIGIN      
        1 mdlktavfna ardgklrllt kllaskskee vsslisektn gatpllmaar yghldmvefl
       61 leqcsasiev ggsvnfdget iegapplwaa saaghlkvvq sllnhgasvn nttltnstpl
      121 raacfdghle ivkylvehka dlevsnrhgh tclmiscykg hkeiaqylle kgadvnrksv
      181 kgntalhdca esgsldimkm llmycakmek dgygmtplls asvtghtniv dflthhaqts
      241 kterinalel lgatfvdkkr dllgalkywk kamnmrysdr tniiskpvpq tlimaydyak
      301 evnsaeeleg liadpdemrm qallireril gpshpdtsyy iryrgavyad sgnfkrcinl
      361 wkyaldmqqn nldplspmta ssllsfaelf sfmlqdrakg llgttvtfdd lmgilcksvl
      421 eieraikqtq cpadplqlnk alsiilhlic llekvpctle qdhfkkqtiy rflklhprgk
      481 nnfsplhlav dknttcvgry pvckfpslqv tailiecgad vnvrdsddns plhiaalnnh
      541 pdimnlliks gahfdatnlh kqtatdllde keiaksliqp inhttlqcla arvivthrvh
      601 ykghipekle afvslhr
//
LOCUS       XP_061014171             377 aa            linear   MAM 02-DEC-2023
DEFINITION  geranylgeranyl transferase type-1 subunit beta [Dama dama].
ACCESSION   XP_061014171
VERSION     XP_061014171.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158188.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..377
                     /product="geranylgeranyl transferase type-1 subunit beta"
                     /calculated_mol_wt=42294
     Region          22..332
                     /region_name="GGTase-I"
                     /note="Geranylgeranyltransferase types I (GGTase-I)-like
                     proteins containing the protein prenyltransferase (PTase)
                     domain, beta subunit (alpha 6 - alpha 6 barrel fold).
                     GGTase-I s are a subgroup of the protein prenyltransferase
                     family of lipid-modifying enzymes...; cd02895"
                     /db_xref="CDD:239225"
     Site            order(42,45..46,49,53,121,123..124,126..127,173,176..177,
                     219,221,225,269,271..272,275,311,320..321)
                     /site_type="active"
                     /note="active site cavity [active]"
                     /db_xref="CDD:239225"
     Site            order(45..46,49,123..124,173,269,311)
                     /site_type="active"
                     /note="peptide binding pocket [active]"
                     /db_xref="CDD:239225"
     Site            order(49,52,173,176,219,221,225,263,266,272,275,320)
                     /site_type="lipid-binding"
                     /note="lipid binding pocket [chemical binding]"
                     /db_xref="CDD:239225"
     Site            order(168,206,216..217,222,250,253,255..256,263..265)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:239225"
     Site            order(269,271,321)
                     /site_type="other"
                     /note="Zn2+ binding site [ion binding]"
                     /db_xref="CDD:239225"
     CDS             1..377
                     /gene="PGGT1B"
                     /coded_by="XM_061158188.1:34..1167"
                     /db_xref="GeneID:133066783"
ORIGIN      
        1 maatederpa gsgegerldf lrdrhvrffq rclqvlpery ssletsrlti affalsgldm
       61 ldsldvvnkd diiewiyslq vlptedrsnl nrcgfrgssy lgipfnpskn pgtahpydsg
      121 hiamtytgls clvilgddls rvnkeaclag lralqledgs fcavpegsen dmrfvycasc
      181 icymlnnwsg mdmkkaisyi rrsmsydngl aqgagleshg gstfcgiasl clmgkleevf
      241 sekelnrikr wcimrqqngy hgrpnkpvdt cysfwvgatl kllkifqytn feknrnyils
      301 tqdrlvggfa kwpdshpdal hayfgicgls lmeesgickv hpalnvstrt serlrdlhqs
      361 wktkdskqcs edvhist
//
LOCUS       XP_061014172             717 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase TRIM36 isoform X1 [Dama dama].
ACCESSION   XP_061014172
VERSION     XP_061014172.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158189.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..717
                     /product="E3 ubiquitin-protein ligase TRIM36 isoform X1"
                     /calculated_mol_wt=81261
     Region          16..113
                     /region_name="RING-HC_TRIM36_C-I"
                     /note="RING finger, HC subclass, found in tripartite
                     motif-containing protein 36 (TRIM36) and similar proteins;
                     cd16756"
                     /db_xref="CDD:438414"
     Region          139..193
                     /region_name="Bbox1_TRIM36_C-I"
                     /note="B-box-type 1 zinc finger found in tripartite
                     motif-containing protein 36 (TRIM36) and similar proteins;
                     cd19848"
                     /db_xref="CDD:380906"
     Region          198..242
                     /region_name="Bbox2_TRIM36_C-I"
                     /note="B-box-type 2 zinc finger found in tripartite
                     motif-containing protein 36 (TRIM36) and similar proteins;
                     cd19778"
                     /db_xref="CDD:380836"
     Region          244..368
                     /region_name="CC_brat-like"
                     /note="coiled-coil (CC) domain of Drosophila brain tumor
                     (brat) and similar proteins; cl29238"
                     /db_xref="CDD:475168"
     Region          347..395
                     /region_name="COS"
                     /note="TRIM C-terminal subgroup One Signature domain;
                     pfam18568"
                     /db_xref="CDD:465805"
     Region          419..480
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; smart00060"
                     /db_xref="CDD:214495"
     Region          504..707
                     /region_name="SPRY_PRY_TRIM36"
                     /note="PRY/SPRY domain in tripartite motif-containing
                     protein 36 (TRIM36); cd12894"
                     /db_xref="CDD:293951"
     CDS             1..717
                     /gene="LOC133066784"
                     /coded_by="XM_061158189.1:144..2297"
                     /db_xref="GeneID:133066784"
ORIGIN      
        1 megdgsdslv tikniereli cpackelfth plilpcqhsi chkcvkelll mlddsfndvg
       61 sdnsnqsspr lrlpspsmdk idrisrpgwk rnsltprttt fpcpgcehdv dlgergingl
      121 frnftletiv eryrqaaraa taimcdlckp ppqestkscm dcsasycnec fkiyhpwgtv
      181 kaqheyvgpt tnfrpkilmc peheterinm ycelcrrpvc hlcklggnhs nhrvttmssa
      241 ykalkeklsk didyligkes qvksqiseln llmketecng erakedaith feklfeilee
      301 rkssvlkaid askklrldkf qtqmeeyqgl lennglvgya qevlketdqs cfvqtakqlh
      361 vriqkatesl ksfrpaaqts fedyvvntsk qtellgelsf fssgvdvpei neeqskvynn
      421 aliswyhpek dkadsyvley rkinrdeeml swneievcgt skvisdlesn cnyafrvray
      481 kgsicspcsr elilhtppap vfsflfdekc gynnehllln lkrdrvesra gfnlllaaer
      541 iqvgyytsld yiigdvgitk gkhfwafrve pysylvkagv assdklqewl rsprdavspr
      601 yeqdsghdsg sedtcfdssq pftlvtigmk kffipkspts snepenrvlp mpasigvlld
      661 cdkgrvafyd vdhmkclyer qvdcshamyp afalmgsggv qleesitaky lgyqesm
//
LOCUS       XP_061014173             620 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase TRIM36 isoform X2 [Dama dama].
ACCESSION   XP_061014173
VERSION     XP_061014173.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158190.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..620
                     /product="E3 ubiquitin-protein ligase TRIM36 isoform X2"
                     /calculated_mol_wt=70124
     Region          16..113
                     /region_name="RING-HC_TRIM36_C-I"
                     /note="RING finger, HC subclass, found in tripartite
                     motif-containing protein 36 (TRIM36) and similar proteins;
                     cd16756"
                     /db_xref="CDD:438414"
     Region          139..193
                     /region_name="Bbox1_TRIM36_C-I"
                     /note="B-box-type 1 zinc finger found in tripartite
                     motif-containing protein 36 (TRIM36) and similar proteins;
                     cd19848"
                     /db_xref="CDD:380906"
     Region          198..242
                     /region_name="Bbox2_TRIM36_C-I"
                     /note="B-box-type 2 zinc finger found in tripartite
                     motif-containing protein 36 (TRIM36) and similar proteins;
                     cd19778"
                     /db_xref="CDD:380836"
     Region          244..368
                     /region_name="CC_brat-like"
                     /note="coiled-coil (CC) domain of Drosophila brain tumor
                     (brat) and similar proteins; cl29238"
                     /db_xref="CDD:475168"
     Region          347..395
                     /region_name="COS"
                     /note="TRIM C-terminal subgroup One Signature domain;
                     pfam18568"
                     /db_xref="CDD:465805"
     Region          410..610
                     /region_name="SPRY_PRY_TRIM36"
                     /note="PRY/SPRY domain in tripartite motif-containing
                     protein 36 (TRIM36); cd12894"
                     /db_xref="CDD:293951"
     CDS             1..620
                     /gene="LOC133066784"
                     /coded_by="XM_061158190.1:146..2008"
                     /db_xref="GeneID:133066784"
ORIGIN      
        1 megdgsdslv tikniereli cpackelfth plilpcqhsi chkcvkelll mlddsfndvg
       61 sdnsnqsspr lrlpspsmdk idrisrpgwk rnsltprttt fpcpgcehdv dlgergingl
      121 frnftletiv eryrqaaraa taimcdlckp ppqestkscm dcsasycnec fkiyhpwgtv
      181 kaqheyvgpt tnfrpkilmc peheterinm ycelcrrpvc hlcklggnhs nhrvttmssa
      241 ykalkeklsk didyligkes qvksqiseln llmketecng erakedaith feklfeilee
      301 rkssvlkaid askklrldkf qtqmeeyqgl lennglvgya qevlketdqs cfvqtakqlh
      361 vriqkatesl ksfrpaaqts fedyvvntsk qtellgelsf fssvfsflfd ekcgynnehl
      421 llnlkrdrve sragfnllla aeriqvgyyt sldyiigdvg itkgkhfwaf rvepysylvk
      481 agvassdklq ewlrsprdav spryeqdsgh dsgsedtcfd ssqpftlvti gmkkffipks
      541 ptssnepenr vlpmpasigv lldcdkgrva fydvdhmkcl yerqvdcsha mypafalmgs
      601 ggvqleesit akylgyqesm
//
LOCUS       XP_061014174            1429 aa            linear   MAM 02-DEC-2023
DEFINITION  3'-5' RNA helicase YTHDC2 isoform X1 [Dama dama].
ACCESSION   XP_061014174
VERSION     XP_061014174.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158191.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1429
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1429
                     /product="3'-5' RNA helicase YTHDC2 isoform X1"
                     /calculated_mol_wt=160087
     Region          45..103
                     /region_name="R3H_DEXH_helicase"
                     /note="R3H domain of a group of proteins which also
                     contain a DEXH-box helicase domain, and may function as
                     ATP-dependent DNA or RNA helicases. The name of the R3H
                     domain comes from the characteristic spacing of the most
                     conserved arginine and histidine...; cd06007"
                     /db_xref="CDD:100077"
     Site            order(74,78)
                     /site_type="other"
                     /note="RxxxH motif"
                     /db_xref="CDD:100077"
     Region          187..>1056
                     /region_name="HrpA"
                     /note="HrpA-like RNA helicase [Translation, ribosomal
                     structure and biogenesis]; COG1643"
                     /db_xref="CDD:441249"
     Region          192..367
                     /region_name="DEXHc_YTHDC2"
                     /note="DEXH-box helicase domain of YTH domain containing
                     2; cd17987"
                     /db_xref="CDD:350745"
     Site            order(192,217..223,258,315..316)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350745"
     Region          504..536
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          538..566
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1288..1417
                     /region_name="YTH"
                     /note="YTH (YT521-B homology) domains are RNA-binding
                     domains that belong to the PUA superfamily; cd21134"
                     /db_xref="CDD:410979"
     CDS             1..1429
                     /gene="YTHDC2"
                     /coded_by="XM_061158191.1:190..4479"
                     /db_xref="GeneID:133066785"
ORIGIN      
        1 msrpssvspr ppapgggggg papcgpgggg rakglkdiri deevkiavni alerfrygdq
       61 remefpsslt sterafihrl sqslglvsks kgkganrylt vkkkdgseta hammtcnlth
      121 ntkhavrsli qrfpvtnker tellpkterg nvfaveaenr emsktsgrln ngipqipvkr
      181 gesefdsfrq slpvfekqee ivkiikenkv vlivgetgsg kttqipqfll ddcfkngipc
      241 rifctqprrl aaiavaerva aerrerigqt igyqirlesr vspktlltfc tngvllrtlm
      301 agdstlstvt hvivdevher drfsdflltk lrdllqkhpt lklilssaal dvnlfiryfg
      361 scpviyiqgr pfevkemfle dilrttgytn kemlkykkek qreekqqttl tewysaqent
      421 fkpesqrqra ipnvteeydl lddggdavfs qltekdvncl epwlikemda clsdiwlhkd
      481 vdafaqvfhl iltenvsvdy rhsetsatal mvaagrgfss qveqlismga nvhskasngw
      541 maldwakhfg qteivdlles ysaslefgnl desslvqtng sdlsaedrel lkayhhsfdd
      601 ekvdldlimh llynichsce agailiflpg ydeivglrdr ilfddkrfad nahryqvfml
      661 hsnmqtsdqk kvlknppagv rkiilstnia etsitvndvv fvidsgkvke ksfdalnfvt
      721 mlkmvwiska saiqrkgrag rcrpgicfrl fsrlrfqnml efqtpellrm plqelclhtk
      781 llapvncaia dflmkapepp palivrnavq mlktidamda wedltelgyh ladlpvephl
      841 gkmvlcavvl kcldpiltia ctlayrdpfv lptqasqkra amlcrkrfta gtfsdhmall
      901 rafqawqkar sdgwerafce knflsqatme iiigmrtqll gqlrasgfvr argggdirdv
      961 ntnsenwavv kaalvagmyp hlvhvdreni vlagpkekkv rfhptsvlsq pqykkippan
     1021 gqtaaiqalp tdwliydemt rahrianirc csavtpvtvl vfcgparlas nalqepssfr
     1081 adgipndssd semedrttan latlkldewl sfklepeaas lllqlrqkwh slflrrmrap
     1141 skpwsqvdea tiraiiavls teeqsaglqq psgigqrprp msseelplas swrsnnsrks
     1201 sadtefsdes ttaervlmks papalhqpqk ykdrgilhpk rstedrsdqs svkstdssny
     1261 pspcaspspp ssgkgsksps pkpnmpiryf imkssnlrnl eisqqkgiws ttpsnerkln
     1321 rafwessvvy lvfsvqgsgh fqgfsrmsse igreksqdwg saglggvfkv ewirkeslpf
     1381 qfahhllnpw ndnkkvqisr dgqelepqvg eqllqlwerl plgektttd
//
LOCUS       XP_061014175            1268 aa            linear   MAM 02-DEC-2023
DEFINITION  3'-5' RNA helicase YTHDC2 isoform X2 [Dama dama].
ACCESSION   XP_061014175
VERSION     XP_061014175.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158192.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1268
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1268
                     /product="3'-5' RNA helicase YTHDC2 isoform X2"
                     /calculated_mol_wt=142635
     Region          26..>895
                     /region_name="HrpA"
                     /note="HrpA-like RNA helicase [Translation, ribosomal
                     structure and biogenesis]; COG1643"
                     /db_xref="CDD:441249"
     Region          31..206
                     /region_name="DEXHc_YTHDC2"
                     /note="DEXH-box helicase domain of YTH domain containing
                     2; cd17987"
                     /db_xref="CDD:350745"
     Site            order(31,56..62,97,154..155)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350745"
     Region          343..375
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          377..405
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1127..1256
                     /region_name="YTH"
                     /note="YTH (YT521-B homology) domains are RNA-binding
                     domains that belong to the PUA superfamily; cd21134"
                     /db_xref="CDD:410979"
     CDS             1..1268
                     /gene="YTHDC2"
                     /coded_by="XM_061158192.1:101..3907"
                     /db_xref="GeneID:133066785"
ORIGIN      
        1 msktsgrlnn gipqipvkrg esefdsfrqs lpvfekqeei vkiikenkvv livgetgsgk
       61 ttqipqflld dcfkngipcr ifctqprrla aiavaervaa errerigqti gyqirlesrv
      121 spktlltfct ngvllrtlma gdstlstvth vivdevherd rfsdflltkl rdllqkhptl
      181 klilssaald vnlfiryfgs cpviyiqgrp fevkemfled ilrttgytnk emlkykkekq
      241 reekqqttlt ewysaqentf kpesqrqrai pnvteeydll ddggdavfsq ltekdvncle
      301 pwlikemdac lsdiwlhkdv dafaqvfhli ltenvsvdyr hsetsatalm vaagrgfssq
      361 veqlismgan vhskasngwm aldwakhfgq teivdllesy saslefgnld esslvqtngs
      421 dlsaedrell kayhhsfdde kvdldlimhl lynichscea gailiflpgy deivglrdri
      481 lfddkrfadn ahryqvfmlh snmqtsdqkk vlknppagvr kiilstniae tsitvndvvf
      541 vidsgkvkek sfdalnfvtm lkmvwiskas aiqrkgragr crpgicfrlf srlrfqnmle
      601 fqtpellrmp lqelclhtkl lapvncaiad flmkapeppp alivrnavqm lktidamdaw
      661 edltelgyhl adlpvephlg kmvlcavvlk cldpiltiac tlayrdpfvl ptqasqkraa
      721 mlcrkrftag tfsdhmallr afqawqkars dgwerafcek nflsqatmei iigmrtqllg
      781 qlrasgfvra rgggdirdvn tnsenwavvk aalvagmyph lvhvdreniv lagpkekkvr
      841 fhptsvlsqp qykkippang qtaaiqalpt dwliydemtr ahrianircc savtpvtvlv
      901 fcgparlasn alqepssfra dgipndssds emedrttanl atlkldewls fklepeaasl
      961 llqlrqkwhs lflrrmraps kpwsqvdeat iraiiavlst eeqsaglqqp sgigqrprpm
     1021 sseelplass wrsnnsrkss adtefsdest taervlmksp apalhqpqky kdrgilhpkr
     1081 stedrsdqss vkstdssnyp spcaspspps sgkgskspsp kpnmpiryfi mkssnlrnle
     1141 isqqkgiwst tpsnerklnr afwessvvyl vfsvqgsghf qgfsrmssei greksqdwgs
     1201 aglggvfkve wirkeslpfq fahhllnpwn dnkkvqisrd gqelepqvge qllqlwerlp
     1261 lgektttd
//
LOCUS       XP_061014176              68 aa            linear   MAM 02-DEC-2023
DEFINITION  neuronal regeneration-related protein [Dama dama].
ACCESSION   XP_061014176
VERSION     XP_061014176.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158193.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..68
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..68
                     /product="neuronal regeneration-related protein"
                     /calculated_mol_wt=7498
     Region          2..68
                     /region_name="Alveol-reg_P311"
                     /note="Neuronal protein 3.1 (p311); pfam11092"
                     /db_xref="CDD:463218"
     CDS             1..68
                     /gene="NREP"
                     /coded_by="XM_061158193.1:128..334"
                     /db_xref="GeneID:133066786"
ORIGIN      
        1 mvyypelsiw vcqepfpdke megrlpkgrl pvpkevnrkk dgeigaaslt plgsnelhsp
       61 gtsylhsf
//
LOCUS       XP_061014177              68 aa            linear   MAM 02-DEC-2023
DEFINITION  neuronal regeneration-related protein [Dama dama].
ACCESSION   XP_061014177
VERSION     XP_061014177.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158194.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..68
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..68
                     /product="neuronal regeneration-related protein"
                     /calculated_mol_wt=7498
     Region          2..68
                     /region_name="Alveol-reg_P311"
                     /note="Neuronal protein 3.1 (p311); pfam11092"
                     /db_xref="CDD:463218"
     CDS             1..68
                     /gene="NREP"
                     /coded_by="XM_061158194.1:131..337"
                     /db_xref="GeneID:133066786"
ORIGIN      
        1 mvyypelsiw vcqepfpdke megrlpkgrl pvpkevnrkk dgeigaaslt plgsnelhsp
       61 gtsylhsf
//
LOCUS       XP_061014178             686 aa            linear   MAM 02-DEC-2023
DEFINITION  band 4.1-like protein 4A isoform X1 [Dama dama].
ACCESSION   XP_061014178
VERSION     XP_061014178.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158195.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..686
                     /product="band 4.1-like protein 4A isoform X1"
                     /calculated_mol_wt=78762
     Region          13..211
                     /region_name="B41"
                     /note="Band 4.1 homologues; smart00295"
                     /db_xref="CDD:214604"
     Region          207..296
                     /region_name="FERM_C_NBL4_NBL5"
                     /note="FERM domain C-lobe of Novel band 4.1-like protein 4
                     and 5 (NBL4 and 5); cd13186"
                     /db_xref="CDD:270007"
     Site            order(215,232,234,240)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270007"
     Site            order(244,249..252,285,289,292..293)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270007"
     Site            285..296
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:270007"
     Region          311..355
                     /region_name="FA"
                     /note="FERM adjacent (FA); pfam08736"
                     /db_xref="CDD:462582"
     CDS             1..686
                     /gene="EPB41L4A"
                     /coded_by="XM_061158195.1:149..2209"
                     /db_xref="GeneID:133066789"
ORIGIN      
        1 mgcfcavpee fycevlllne skltlttqqq gikkstkgsi vlehvfrhin lvevdyfglr
       61 ycdrnhqtyw ldpaktlseh kelintgppy tlyfgikfya edpcklkeei tryqfflqvk
      121 qdvlqgrlpc pintaaqlga yaiqaelgdy dpykhtagyv seyrfvpdqk eeleeaieri
      181 hktlmgqaps eaelnylrta kslemygvdl hpvygenkse yflgltpvgv vvyknkkqvg
      241 kyfwpritkv hfketqfelr vlgkdcsets fffearskta ckhlwkcsve yhtffrmpen
      301 eanslsrkls kfgsmsykhr ysgrtalqms rdlsiqlprp dqnvsrsrsk typkriaqtq
      361 pagsnsmnrv tanmengene gttkiiapsp iksfkkakne nspdtqrsks hapweengpq
      421 sglynspndr tkspkfpytr rrnpscgsdn dsvqptrrrk ahnsgedsdl kqrrrsrsrc
      481 ntssgsesen snrehrkkrn rirqendmvd sapqweavlr rqkeknqadp nnrrsrhrsr
      541 srspdiqake elwkhiqkel vdpsglseeq lkeipytkie tqgdpvrirh shsprsyrqy
      601 rrsqcsdger svlsevnskt dlvpplpvtr ssdaqgsggs tvhqrrngsk dslteeksqt
      661 stsnmagkht aktiktiqas rlkiet
//
LOCUS       XP_061014179             648 aa            linear   MAM 02-DEC-2023
DEFINITION  band 4.1-like protein 4A isoform X2 [Dama dama].
ACCESSION   XP_061014179
VERSION     XP_061014179.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158196.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..648
                     /product="band 4.1-like protein 4A isoform X2"
                     /calculated_mol_wt=74424
     Region          13..211
                     /region_name="B41"
                     /note="Band 4.1 homologues; smart00295"
                     /db_xref="CDD:214604"
     Region          207..296
                     /region_name="FERM_C_NBL4_NBL5"
                     /note="FERM domain C-lobe of Novel band 4.1-like protein 4
                     and 5 (NBL4 and 5); cd13186"
                     /db_xref="CDD:270007"
     Site            order(215,232,234,240)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270007"
     Site            order(244,249..252,285,289,292..293)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270007"
     Site            285..296
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:270007"
     Region          311..355
                     /region_name="FA"
                     /note="FERM adjacent (FA); pfam08736"
                     /db_xref="CDD:462582"
     CDS             1..648
                     /gene="EPB41L4A"
                     /coded_by="XM_061158196.1:149..2095"
                     /db_xref="GeneID:133066789"
ORIGIN      
        1 mgcfcavpee fycevlllne skltlttqqq gikkstkgsi vlehvfrhin lvevdyfglr
       61 ycdrnhqtyw ldpaktlseh kelintgppy tlyfgikfya edpcklkeei tryqfflqvk
      121 qdvlqgrlpc pintaaqlga yaiqaelgdy dpykhtagyv seyrfvpdqk eeleeaieri
      181 hktlmgqaps eaelnylrta kslemygvdl hpvygenkse yflgltpvgv vvyknkkqvg
      241 kyfwpritkv hfketqfelr vlgkdcsets fffearskta ckhlwkcsve yhtffrmpen
      301 eanslsrkls kfgsmsykhr ysgrtalqms rdlsiqlprp dqnvsrsrsk typkriaqtq
      361 pagsnsmnrv tanmengene gttkiiapsp iksfkkakne nspdtqrsks hapweengpq
      421 rkahnsgeds dlkqrrrsrs rcntssgses ensnrehrkk rnrirqendm vdsapqweav
      481 lrrqkeknqa dpnnrrsrhr srsrspdiqa keelwkhiqk elvdpsglse eqlkeipytk
      541 ietqgdpvri rhshsprsyr qyrrsqcsdg ersvlsevns ktdlvpplpv trssdaqgsg
      601 gstvhqrrng skdslteeks qtstsnmagk htaktiktiq asrlkiet
//
LOCUS       XP_061014180             646 aa            linear   MAM 02-DEC-2023
DEFINITION  band 4.1-like protein 4A isoform X3 [Dama dama].
ACCESSION   XP_061014180
VERSION     XP_061014180.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158197.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..646
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..646
                     /product="band 4.1-like protein 4A isoform X3"
                     /calculated_mol_wt=73919
     Region          13..211
                     /region_name="B41"
                     /note="Band 4.1 homologues; smart00295"
                     /db_xref="CDD:214604"
     Region          207..296
                     /region_name="FERM_C_NBL4_NBL5"
                     /note="FERM domain C-lobe of Novel band 4.1-like protein 4
                     and 5 (NBL4 and 5); cd13186"
                     /db_xref="CDD:270007"
     Site            order(215,232,234,240)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270007"
     Site            order(244,249..252,285,289,292..293)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270007"
     Site            285..296
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:270007"
     Region          311..355
                     /region_name="FA"
                     /note="FERM adjacent (FA); pfam08736"
                     /db_xref="CDD:462582"
     CDS             1..646
                     /gene="EPB41L4A"
                     /coded_by="XM_061158197.1:149..2089"
                     /db_xref="GeneID:133066789"
ORIGIN      
        1 mgcfcavpee fycevlllne skltlttqqq gikkstkgsi vlehvfrhin lvevdyfglr
       61 ycdrnhqtyw ldpaktlseh kelintgppy tlyfgikfya edpcklkeei tryqfflqvk
      121 qdvlqgrlpc pintaaqlga yaiqaelgdy dpykhtagyv seyrfvpdqk eeleeaieri
      181 hktlmgqaps eaelnylrta kslemygvdl hpvygenkse yflgltpvgv vvyknkkqvg
      241 kyfwpritkv hfketqfelr vlgkdcsets fffearskta ckhlwkcsve yhtffrmpen
      301 eanslsrkls kfgsmsykhr ysgrtalqms rdlsiqlprp dqnvsrsrsk typkriaqtq
      361 pagsnsmnrv tanmengene gttkiiapsp iksfkkakne nspdtqrsks hapweengpq
      421 sglynspndr tkspkfpytr rrnpscgsdn dsvqptrrrk ahnsgedsdl kqrrrsrsrc
      481 ntssgsesen snrehrkkrn rrspdiqake elwkhiqkel vdpsglseeq lkeipytkie
      541 tqgdpvrirh shsprsyrqy rrsqcsdger svlsevnskt dlvpplpvtr ssdaqgsggs
      601 tvhqrrngsk dslteeksqt stsnmagkht aktiktiqas rlkiet
//
LOCUS       XP_061014181            2879 aa            linear   MAM 02-DEC-2023
DEFINITION  adenomatous polyposis coli protein isoform X1 [Dama dama].
ACCESSION   XP_061014181
VERSION     XP_061014181.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158198.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2879
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2879
                     /product="adenomatous polyposis coli protein isoform X1"
                     /calculated_mol_wt=314456
     Region          137..217
                     /region_name="Suppressor_APC"
                     /note="Adenomatous polyposis coli tumour suppressor
                     protein; pfam11414"
                     /db_xref="CDD:463275"
     Region          350..402
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          403..476
                     /region_name="APC_rep"
                     /note="Adenomatous polyposis coli (APC) repeat; pfam18797"
                     /db_xref="CDD:465870"
     Region          500..536
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          540..581
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          544..581
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          591..623
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(614,618,622,661,665,669,706,710,714)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          631..672
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          677..717
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          681..715
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          719..759
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          723..759
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          760..1047
                     /region_name="Arm_APC_u3"
                     /note="Armadillo-associated region on APC; pfam16629"
                     /db_xref="CDD:435476"
     Region          1064..1163
                     /region_name="APC_u5"
                     /note="Unstructured region on APC between 1st and 2nd
                     catenin-bdg motifs; pfam16630"
                     /db_xref="CDD:406923"
     Region          <1212..1402
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          1313..1398
                     /region_name="APC_u9"
                     /note="Unstructured region on APC between 1st two
                     creatine-rich regions; pfam16633"
                     /db_xref="CDD:435478"
     Region          1401..1423
                     /region_name="APC_r"
                     /note="APC repeat; pfam05923"
                     /db_xref="CDD:461781"
     Region          1670..1693
                     /region_name="APC_r"
                     /note="APC repeat; pfam05923"
                     /db_xref="CDD:461781"
     Region          1695..1748
                     /region_name="APC_u13"
                     /note="Unstructured region on APC between APC_crr and
                     SAMP; pfam16634"
                     /db_xref="CDD:406927"
     Region          1752..1770
                     /region_name="SAMP"
                     /note="SAMP Motif; pfam05924"
                     /db_xref="CDD:461782"
     Region          1779..1872
                     /region_name="APC_u14"
                     /note="Unstructured region on APC between SAMP and
                     APC_crr; pfam16635"
                     /db_xref="CDD:435479"
     Region          1906..1980
                     /region_name="APC_u15"
                     /note="Unstructured region on APC between APC_crr regions
                     5 and 6; pfam16636"
                     /db_xref="CDD:435480"
     Region          2068..2087
                     /region_name="SAMP"
                     /note="SAMP Motif; pfam05924"
                     /db_xref="CDD:461782"
     Region          2258..2603
                     /region_name="APC_basic"
                     /note="APC basic domain; pfam05956"
                     /db_xref="CDD:428690"
     Region          2705..2879
                     /region_name="EB1_binding"
                     /note="EB-1 Binding Domain; pfam05937"
                     /db_xref="CDD:399141"
     CDS             1..2879
                     /gene="APC"
                     /coded_by="XM_061158198.1:126..8765"
                     /db_xref="GeneID:133066790"
ORIGIN      
        1 mytpvcssav aalptsvppc avgsrssggg rgcvrqerkr pgcvrasvrg asvwqevlkq
       61 lqgsiedeam assgqidlle rlkelnldss nfpgvklrsk mslrsygsre gsvssrsgec
      121 spvpmgsfpr rgfvngsren tgyleeleke rsllladldk eekekdwyya qlqnltkrid
      181 slpltenfsl qtdmtrrqle yearqirvam eeqlgtcqdm ekraqrritr iqqiekdilr
      241 irqllqsqat eaerssqskh eagsheaerq negqgvaein matsgsgqgs ttridhetas
      301 vlssssthsa prrltshlgt kvemvyslls mlgthdkddm srtllamsss qdscismrqs
      361 gclplliqll hgndkdsvll gnsrgskear arasaalhni ihsqpddkrg rreirvlhll
      421 eqiraycetc wewqeaheqg mdqdknpmpa pvehqicpav cvlmklsfde ehrhamnelg
      481 rkatrgissq elgqglsggl qaiaellqvd cemygltndh ysitlrryag maltnltfgd
      541 vankatlcsm kgcmralvaq lksdsedlqq viasvlrnls wradvnskkt lrevgsvkal
      601 mecalevkke stlksvlsal wnlsahcten kadicavgga laflvgtlty rsqtntlaii
      661 esgggilrnv ssliatnedh rqilrenncl qtllqhlksh sltivsnacg tlwnlsarnp
      721 kdqealwdmg avsmlknlih skhkmiamgs aaalrnlman rpakykdani mspgsslpsl
      781 hvrkqkalea eldaqhlset fdnidnlspk ashrskqrhk qnlygdygfd snrhddnrsd
      841 nfntgnmtvl spylnttvlp sssssrgsld ssrsekdrsl erergislgn yhpatenpgt
      901 sskrglqist taaqiakvme evsaihtsqe drssgsttel hcgtdernal rrsstahtha
      961 ntynftksen snrtcpipya kveykrssnd slnsvsssdg ygkrgqmkps iesyseddes
     1021 kfcsygqypa dlahkihsan hmddndgeld tpinyslkys deqlnsgrqs psqnerwarp
     1081 khiledeikp neqrqsrsqs taypvypest ddkhlkfqph fgqqecvspy rsraangsep
     1141 nrvgsnhgis qnvnqslcqe ddyeddkptn yseryseegq heeeerptny sikyseekhh
     1201 vdqpidyslk yttdipssqk pafsfsknss gqstktehis sssentstps snakrqnqlh
     1261 pssaqsrssq tpkatsssck vpsinqetiq tycvedtpic fsrcsslssl ssaedeigcd
     1321 qttqeadpan slqiaeikdn sgprpnedsv skvpavsqhv rtkssrlqas glssesarhk
     1381 avefssgaks psksgaqtpk sppehyvqet plmfsrctsv ssldsfesrs iassvqsepc
     1441 sgmvsgiisp sdlpdspgqt mppsrsktpp ppppppqtvq tkqevpknka psaekresgp
     1501 kqaavnaavq rvqvlpdadt llhfatestp dgfscsssls alsldepfiq kdvelrimpp
     1561 vqendngnet eseqpeesne nqekeaekpt dsekdildes ddddieilee ciisamptks
     1621 srkakkpaqt tsklpppvar kpsqlpvykl lpsqnrlqaq khvsftpgdd mprvycvegt
     1681 pinfstatsl sdltiesppn elaagegvra gaqssefekr dtiptegrst deaqrgkass
     1741 vtvpelddnk teegdilaec insampkgks hkpfrvkkim dqvqqasmss sgtnknqldg
     1801 ktkkltspvk pipqnteyrt rvrkntdskn nlnaernfse nkdskkqhlk nnskdfndkl
     1861 pnnedrvrgs ftfdsphhyt piegtpycfs rndslssldf ddddvdlsre kaelrkgken
     1921 keseatvtnh teltsnqqsa nktpavtkqp inrgqsksvl qkqstfpqss kdipdrgaat
     1981 deklqnfaie ntpvcfsrns slsslsdidq ennnnnkene piketeppds qgeaskpqas
     2041 gyapksfhve dtpvcfsrns slsslsidse ddllqeciss ampkkkkpsr lkadnekhsp
     2101 rnmggilaed ltldlkdiqr pdsehglspd senfdwkaiq egansivssl hqaaaaacls
     2161 rqassdsdsi lslksgislg spfhltpdqe ekpftsnkgp rilkpgekst letkklesen
     2221 kgikggkkvy kslitgkvrs nseissqmkq plqtnmpais rgrtmihipg vrnsssstsp
     2281 vskkgpplkt paskspsegq aattsprgtk psvkselspv trqasqtags nkgpsrsgsr
     2341 dstpsrpaqq plsrpmqspg rnsispgrng isppnklsql prtsspstas tkssgsgkms
     2401 ytspgrqmsq qnltkqtgls kngsgiprse saskglnqms nsngsnkkve lsrmsstkss
     2461 gsesdrserp vlvrqstfik eapsptlrrk leesasfesl spssrpdspt rsqahtpvls
     2521 pslpdmslst hssvqsggwr klppnlspti eyndgrpvkr hdiarshses psrlpinrsg
     2581 twkrehskhs sslprvstwr rtgssssils assessekak sedekhvnsi sgskqtkenq
     2641 vstkgtwrki keseisptss tsqttssgat ngaesktliy qmapavskte dvwvriedcp
     2701 innprsgrsp tgntppvidt vsekgnpnpk dskdnqgkqn vsngsaptrt mglenrlnsf
     2761 iqvdppdqkg teakpgqsnn pvpasetnes siaertpfss sssskhssps gtvaarvspf
     2821 nynpsprkss adgtsarpsq iptpvstttk krdskpdsae pggtqspkrh sgsylvtsv
//
LOCUS       XP_061014182            2869 aa            linear   MAM 02-DEC-2023
DEFINITION  adenomatous polyposis coli protein isoform X2 [Dama dama].
ACCESSION   XP_061014182
VERSION     XP_061014182.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158199.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2869
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2869
                     /product="adenomatous polyposis coli protein isoform X2"
                     /calculated_mol_wt=313959
     Region          4..55
                     /region_name="APC_N_CC"
                     /note="Coiled-coil N-terminus of APC, dimerization domain;
                     pfam16689"
                     /db_xref="CDD:435517"
     Region          <8..268
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          127..207
                     /region_name="Suppressor_APC"
                     /note="Adenomatous polyposis coli tumour suppressor
                     protein; pfam11414"
                     /db_xref="CDD:463275"
     Region          340..392
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          393..466
                     /region_name="APC_rep"
                     /note="Adenomatous polyposis coli (APC) repeat; pfam18797"
                     /db_xref="CDD:465870"
     Region          490..526
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          530..571
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          534..571
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          581..613
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(604,608,612,651,655,659,696,700,704)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          621..662
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          667..707
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          671..705
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          709..749
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          713..749
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          750..1037
                     /region_name="Arm_APC_u3"
                     /note="Armadillo-associated region on APC; pfam16629"
                     /db_xref="CDD:435476"
     Region          1054..1153
                     /region_name="APC_u5"
                     /note="Unstructured region on APC between 1st and 2nd
                     catenin-bdg motifs; pfam16630"
                     /db_xref="CDD:406923"
     Region          <1202..1392
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          1303..1388
                     /region_name="APC_u9"
                     /note="Unstructured region on APC between 1st two
                     creatine-rich regions; pfam16633"
                     /db_xref="CDD:435478"
     Region          <1358..1725
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          1391..1413
                     /region_name="APC_r"
                     /note="APC repeat; pfam05923"
                     /db_xref="CDD:461781"
     Region          1660..1683
                     /region_name="APC_r"
                     /note="APC repeat; pfam05923"
                     /db_xref="CDD:461781"
     Region          1685..1738
                     /region_name="APC_u13"
                     /note="Unstructured region on APC between APC_crr and
                     SAMP; pfam16634"
                     /db_xref="CDD:406927"
     Region          1742..1760
                     /region_name="SAMP"
                     /note="SAMP Motif; pfam05924"
                     /db_xref="CDD:461782"
     Region          1769..1862
                     /region_name="APC_u14"
                     /note="Unstructured region on APC between SAMP and
                     APC_crr; pfam16635"
                     /db_xref="CDD:435479"
     Region          1896..1970
                     /region_name="APC_u15"
                     /note="Unstructured region on APC between APC_crr regions
                     5 and 6; pfam16636"
                     /db_xref="CDD:435480"
     Region          2058..2077
                     /region_name="SAMP"
                     /note="SAMP Motif; pfam05924"
                     /db_xref="CDD:461782"
     Region          2248..2593
                     /region_name="APC_basic"
                     /note="APC basic domain; pfam05956"
                     /db_xref="CDD:428690"
     Region          2695..2869
                     /region_name="EB1_binding"
                     /note="EB-1 Binding Domain; pfam05937"
                     /db_xref="CDD:399141"
     CDS             1..2869
                     /gene="APC"
                     /coded_by="XM_061158199.1:178..8787"
                     /db_xref="GeneID:133066790"
ORIGIN      
        1 maaasydqll kqvealkmen snlrqeledn snhltklete asnmkevlkq lqgsiedeam
       61 assgqidlle rlkelnldss nfpgvklrsk mslrsygsre gsvssrsgec spvpmgsfpr
      121 rgfvngsren tgyleeleke rsllladldk eekekdwyya qlqnltkrid slpltenfsl
      181 qtdmtrrqle yearqirvam eeqlgtcqdm ekraqrritr iqqiekdilr irqllqsqat
      241 eaerssqskh eagsheaerq negqgvaein matsgsgqgs ttridhetas vlssssthsa
      301 prrltshlgt kvemvyslls mlgthdkddm srtllamsss qdscismrqs gclplliqll
      361 hgndkdsvll gnsrgskear arasaalhni ihsqpddkrg rreirvlhll eqiraycetc
      421 wewqeaheqg mdqdknpmpa pvehqicpav cvlmklsfde ehrhamnelg rkatrgissq
      481 elgqglsggl qaiaellqvd cemygltndh ysitlrryag maltnltfgd vankatlcsm
      541 kgcmralvaq lksdsedlqq viasvlrnls wradvnskkt lrevgsvkal mecalevkke
      601 stlksvlsal wnlsahcten kadicavgga laflvgtlty rsqtntlaii esgggilrnv
      661 ssliatnedh rqilrenncl qtllqhlksh sltivsnacg tlwnlsarnp kdqealwdmg
      721 avsmlknlih skhkmiamgs aaalrnlman rpakykdani mspgsslpsl hvrkqkalea
      781 eldaqhlset fdnidnlspk ashrskqrhk qnlygdygfd snrhddnrsd nfntgnmtvl
      841 spylnttvlp sssssrgsld ssrsekdrsl erergislgn yhpatenpgt sskrglqist
      901 taaqiakvme evsaihtsqe drssgsttel hcgtdernal rrsstahtha ntynftksen
      961 snrtcpipya kveykrssnd slnsvsssdg ygkrgqmkps iesyseddes kfcsygqypa
     1021 dlahkihsan hmddndgeld tpinyslkys deqlnsgrqs psqnerwarp khiledeikp
     1081 neqrqsrsqs taypvypest ddkhlkfqph fgqqecvspy rsraangsep nrvgsnhgis
     1141 qnvnqslcqe ddyeddkptn yseryseegq heeeerptny sikyseekhh vdqpidyslk
     1201 yttdipssqk pafsfsknss gqstktehis sssentstps snakrqnqlh pssaqsrssq
     1261 tpkatsssck vpsinqetiq tycvedtpic fsrcsslssl ssaedeigcd qttqeadpan
     1321 slqiaeikdn sgprpnedsv skvpavsqhv rtkssrlqas glssesarhk avefssgaks
     1381 psksgaqtpk sppehyvqet plmfsrctsv ssldsfesrs iassvqsepc sgmvsgiisp
     1441 sdlpdspgqt mppsrsktpp ppppppqtvq tkqevpknka psaekresgp kqaavnaavq
     1501 rvqvlpdadt llhfatestp dgfscsssls alsldepfiq kdvelrimpp vqendngnet
     1561 eseqpeesne nqekeaekpt dsekdildes ddddieilee ciisamptks srkakkpaqt
     1621 tsklpppvar kpsqlpvykl lpsqnrlqaq khvsftpgdd mprvycvegt pinfstatsl
     1681 sdltiesppn elaagegvra gaqssefekr dtiptegrst deaqrgkass vtvpelddnk
     1741 teegdilaec insampkgks hkpfrvkkim dqvqqasmss sgtnknqldg ktkkltspvk
     1801 pipqnteyrt rvrkntdskn nlnaernfse nkdskkqhlk nnskdfndkl pnnedrvrgs
     1861 ftfdsphhyt piegtpycfs rndslssldf ddddvdlsre kaelrkgken keseatvtnh
     1921 teltsnqqsa nktpavtkqp inrgqsksvl qkqstfpqss kdipdrgaat deklqnfaie
     1981 ntpvcfsrns slsslsdidq ennnnnkene piketeppds qgeaskpqas gyapksfhve
     2041 dtpvcfsrns slsslsidse ddllqeciss ampkkkkpsr lkadnekhsp rnmggilaed
     2101 ltldlkdiqr pdsehglspd senfdwkaiq egansivssl hqaaaaacls rqassdsdsi
     2161 lslksgislg spfhltpdqe ekpftsnkgp rilkpgekst letkklesen kgikggkkvy
     2221 kslitgkvrs nseissqmkq plqtnmpais rgrtmihipg vrnsssstsp vskkgpplkt
     2281 paskspsegq aattsprgtk psvkselspv trqasqtags nkgpsrsgsr dstpsrpaqq
     2341 plsrpmqspg rnsispgrng isppnklsql prtsspstas tkssgsgkms ytspgrqmsq
     2401 qnltkqtgls kngsgiprse saskglnqms nsngsnkkve lsrmsstkss gsesdrserp
     2461 vlvrqstfik eapsptlrrk leesasfesl spssrpdspt rsqahtpvls pslpdmslst
     2521 hssvqsggwr klppnlspti eyndgrpvkr hdiarshses psrlpinrsg twkrehskhs
     2581 sslprvstwr rtgssssils assessekak sedekhvnsi sgskqtkenq vstkgtwrki
     2641 keseisptss tsqttssgat ngaesktliy qmapavskte dvwvriedcp innprsgrsp
     2701 tgntppvidt vsekgnpnpk dskdnqgkqn vsngsaptrt mglenrlnsf iqvdppdqkg
     2761 teakpgqsnn pvpasetnes siaertpfss sssskhssps gtvaarvspf nynpsprkss
     2821 adgtsarpsq iptpvstttk krdskpdsae pggtqspkrh sgsylvtsv
//
LOCUS       XP_061014183            2869 aa            linear   MAM 02-DEC-2023
DEFINITION  adenomatous polyposis coli protein isoform X2 [Dama dama].
ACCESSION   XP_061014183
VERSION     XP_061014183.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158200.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2869
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2869
                     /product="adenomatous polyposis coli protein isoform X2"
                     /calculated_mol_wt=313959
     Region          4..55
                     /region_name="APC_N_CC"
                     /note="Coiled-coil N-terminus of APC, dimerization domain;
                     pfam16689"
                     /db_xref="CDD:435517"
     Region          <8..268
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          127..207
                     /region_name="Suppressor_APC"
                     /note="Adenomatous polyposis coli tumour suppressor
                     protein; pfam11414"
                     /db_xref="CDD:463275"
     Region          340..392
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          393..466
                     /region_name="APC_rep"
                     /note="Adenomatous polyposis coli (APC) repeat; pfam18797"
                     /db_xref="CDD:465870"
     Region          490..526
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          530..571
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          534..571
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          581..613
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(604,608,612,651,655,659,696,700,704)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          621..662
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          667..707
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          671..705
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          709..749
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          713..749
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          750..1037
                     /region_name="Arm_APC_u3"
                     /note="Armadillo-associated region on APC; pfam16629"
                     /db_xref="CDD:435476"
     Region          1054..1153
                     /region_name="APC_u5"
                     /note="Unstructured region on APC between 1st and 2nd
                     catenin-bdg motifs; pfam16630"
                     /db_xref="CDD:406923"
     Region          <1202..1392
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          1303..1388
                     /region_name="APC_u9"
                     /note="Unstructured region on APC between 1st two
                     creatine-rich regions; pfam16633"
                     /db_xref="CDD:435478"
     Region          <1358..1725
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          1391..1413
                     /region_name="APC_r"
                     /note="APC repeat; pfam05923"
                     /db_xref="CDD:461781"
     Region          1660..1683
                     /region_name="APC_r"
                     /note="APC repeat; pfam05923"
                     /db_xref="CDD:461781"
     Region          1685..1738
                     /region_name="APC_u13"
                     /note="Unstructured region on APC between APC_crr and
                     SAMP; pfam16634"
                     /db_xref="CDD:406927"
     Region          1742..1760
                     /region_name="SAMP"
                     /note="SAMP Motif; pfam05924"
                     /db_xref="CDD:461782"
     Region          1769..1862
                     /region_name="APC_u14"
                     /note="Unstructured region on APC between SAMP and
                     APC_crr; pfam16635"
                     /db_xref="CDD:435479"
     Region          1896..1970
                     /region_name="APC_u15"
                     /note="Unstructured region on APC between APC_crr regions
                     5 and 6; pfam16636"
                     /db_xref="CDD:435480"
     Region          2058..2077
                     /region_name="SAMP"
                     /note="SAMP Motif; pfam05924"
                     /db_xref="CDD:461782"
     Region          2248..2593
                     /region_name="APC_basic"
                     /note="APC basic domain; pfam05956"
                     /db_xref="CDD:428690"
     Region          2695..2869
                     /region_name="EB1_binding"
                     /note="EB-1 Binding Domain; pfam05937"
                     /db_xref="CDD:399141"
     CDS             1..2869
                     /gene="APC"
                     /coded_by="XM_061158200.1:151..8760"
                     /db_xref="GeneID:133066790"
ORIGIN      
        1 maaasydqll kqvealkmen snlrqeledn snhltklete asnmkevlkq lqgsiedeam
       61 assgqidlle rlkelnldss nfpgvklrsk mslrsygsre gsvssrsgec spvpmgsfpr
      121 rgfvngsren tgyleeleke rsllladldk eekekdwyya qlqnltkrid slpltenfsl
      181 qtdmtrrqle yearqirvam eeqlgtcqdm ekraqrritr iqqiekdilr irqllqsqat
      241 eaerssqskh eagsheaerq negqgvaein matsgsgqgs ttridhetas vlssssthsa
      301 prrltshlgt kvemvyslls mlgthdkddm srtllamsss qdscismrqs gclplliqll
      361 hgndkdsvll gnsrgskear arasaalhni ihsqpddkrg rreirvlhll eqiraycetc
      421 wewqeaheqg mdqdknpmpa pvehqicpav cvlmklsfde ehrhamnelg rkatrgissq
      481 elgqglsggl qaiaellqvd cemygltndh ysitlrryag maltnltfgd vankatlcsm
      541 kgcmralvaq lksdsedlqq viasvlrnls wradvnskkt lrevgsvkal mecalevkke
      601 stlksvlsal wnlsahcten kadicavgga laflvgtlty rsqtntlaii esgggilrnv
      661 ssliatnedh rqilrenncl qtllqhlksh sltivsnacg tlwnlsarnp kdqealwdmg
      721 avsmlknlih skhkmiamgs aaalrnlman rpakykdani mspgsslpsl hvrkqkalea
      781 eldaqhlset fdnidnlspk ashrskqrhk qnlygdygfd snrhddnrsd nfntgnmtvl
      841 spylnttvlp sssssrgsld ssrsekdrsl erergislgn yhpatenpgt sskrglqist
      901 taaqiakvme evsaihtsqe drssgsttel hcgtdernal rrsstahtha ntynftksen
      961 snrtcpipya kveykrssnd slnsvsssdg ygkrgqmkps iesyseddes kfcsygqypa
     1021 dlahkihsan hmddndgeld tpinyslkys deqlnsgrqs psqnerwarp khiledeikp
     1081 neqrqsrsqs taypvypest ddkhlkfqph fgqqecvspy rsraangsep nrvgsnhgis
     1141 qnvnqslcqe ddyeddkptn yseryseegq heeeerptny sikyseekhh vdqpidyslk
     1201 yttdipssqk pafsfsknss gqstktehis sssentstps snakrqnqlh pssaqsrssq
     1261 tpkatsssck vpsinqetiq tycvedtpic fsrcsslssl ssaedeigcd qttqeadpan
     1321 slqiaeikdn sgprpnedsv skvpavsqhv rtkssrlqas glssesarhk avefssgaks
     1381 psksgaqtpk sppehyvqet plmfsrctsv ssldsfesrs iassvqsepc sgmvsgiisp
     1441 sdlpdspgqt mppsrsktpp ppppppqtvq tkqevpknka psaekresgp kqaavnaavq
     1501 rvqvlpdadt llhfatestp dgfscsssls alsldepfiq kdvelrimpp vqendngnet
     1561 eseqpeesne nqekeaekpt dsekdildes ddddieilee ciisamptks srkakkpaqt
     1621 tsklpppvar kpsqlpvykl lpsqnrlqaq khvsftpgdd mprvycvegt pinfstatsl
     1681 sdltiesppn elaagegvra gaqssefekr dtiptegrst deaqrgkass vtvpelddnk
     1741 teegdilaec insampkgks hkpfrvkkim dqvqqasmss sgtnknqldg ktkkltspvk
     1801 pipqnteyrt rvrkntdskn nlnaernfse nkdskkqhlk nnskdfndkl pnnedrvrgs
     1861 ftfdsphhyt piegtpycfs rndslssldf ddddvdlsre kaelrkgken keseatvtnh
     1921 teltsnqqsa nktpavtkqp inrgqsksvl qkqstfpqss kdipdrgaat deklqnfaie
     1981 ntpvcfsrns slsslsdidq ennnnnkene piketeppds qgeaskpqas gyapksfhve
     2041 dtpvcfsrns slsslsidse ddllqeciss ampkkkkpsr lkadnekhsp rnmggilaed
     2101 ltldlkdiqr pdsehglspd senfdwkaiq egansivssl hqaaaaacls rqassdsdsi
     2161 lslksgislg spfhltpdqe ekpftsnkgp rilkpgekst letkklesen kgikggkkvy
     2221 kslitgkvrs nseissqmkq plqtnmpais rgrtmihipg vrnsssstsp vskkgpplkt
     2281 paskspsegq aattsprgtk psvkselspv trqasqtags nkgpsrsgsr dstpsrpaqq
     2341 plsrpmqspg rnsispgrng isppnklsql prtsspstas tkssgsgkms ytspgrqmsq
     2401 qnltkqtgls kngsgiprse saskglnqms nsngsnkkve lsrmsstkss gsesdrserp
     2461 vlvrqstfik eapsptlrrk leesasfesl spssrpdspt rsqahtpvls pslpdmslst
     2521 hssvqsggwr klppnlspti eyndgrpvkr hdiarshses psrlpinrsg twkrehskhs
     2581 sslprvstwr rtgssssils assessekak sedekhvnsi sgskqtkenq vstkgtwrki
     2641 keseisptss tsqttssgat ngaesktliy qmapavskte dvwvriedcp innprsgrsp
     2701 tgntppvidt vsekgnpnpk dskdnqgkqn vsngsaptrt mglenrlnsf iqvdppdqkg
     2761 teakpgqsnn pvpasetnes siaertpfss sssskhssps gtvaarvspf nynpsprkss
     2821 adgtsarpsq iptpvstttk krdskpdsae pggtqspkrh sgsylvtsv
//
LOCUS       XP_061014184            2869 aa            linear   MAM 02-DEC-2023
DEFINITION  adenomatous polyposis coli protein isoform X2 [Dama dama].
ACCESSION   XP_061014184
VERSION     XP_061014184.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158201.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2869
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2869
                     /product="adenomatous polyposis coli protein isoform X2"
                     /calculated_mol_wt=313959
     Region          4..55
                     /region_name="APC_N_CC"
                     /note="Coiled-coil N-terminus of APC, dimerization domain;
                     pfam16689"
                     /db_xref="CDD:435517"
     Region          <8..268
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          127..207
                     /region_name="Suppressor_APC"
                     /note="Adenomatous polyposis coli tumour suppressor
                     protein; pfam11414"
                     /db_xref="CDD:463275"
     Region          340..392
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          393..466
                     /region_name="APC_rep"
                     /note="Adenomatous polyposis coli (APC) repeat; pfam18797"
                     /db_xref="CDD:465870"
     Region          490..526
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          530..571
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          534..571
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          581..613
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(604,608,612,651,655,659,696,700,704)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          621..662
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          667..707
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          671..705
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          709..749
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          713..749
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          750..1037
                     /region_name="Arm_APC_u3"
                     /note="Armadillo-associated region on APC; pfam16629"
                     /db_xref="CDD:435476"
     Region          1054..1153
                     /region_name="APC_u5"
                     /note="Unstructured region on APC between 1st and 2nd
                     catenin-bdg motifs; pfam16630"
                     /db_xref="CDD:406923"
     Region          <1202..1392
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          1303..1388
                     /region_name="APC_u9"
                     /note="Unstructured region on APC between 1st two
                     creatine-rich regions; pfam16633"
                     /db_xref="CDD:435478"
     Region          <1358..1725
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          1391..1413
                     /region_name="APC_r"
                     /note="APC repeat; pfam05923"
                     /db_xref="CDD:461781"
     Region          1660..1683
                     /region_name="APC_r"
                     /note="APC repeat; pfam05923"
                     /db_xref="CDD:461781"
     Region          1685..1738
                     /region_name="APC_u13"
                     /note="Unstructured region on APC between APC_crr and
                     SAMP; pfam16634"
                     /db_xref="CDD:406927"
     Region          1742..1760
                     /region_name="SAMP"
                     /note="SAMP Motif; pfam05924"
                     /db_xref="CDD:461782"
     Region          1769..1862
                     /region_name="APC_u14"
                     /note="Unstructured region on APC between SAMP and
                     APC_crr; pfam16635"
                     /db_xref="CDD:435479"
     Region          1896..1970
                     /region_name="APC_u15"
                     /note="Unstructured region on APC between APC_crr regions
                     5 and 6; pfam16636"
                     /db_xref="CDD:435480"
     Region          2058..2077
                     /region_name="SAMP"
                     /note="SAMP Motif; pfam05924"
                     /db_xref="CDD:461782"
     Region          2248..2593
                     /region_name="APC_basic"
                     /note="APC basic domain; pfam05956"
                     /db_xref="CDD:428690"
     Region          2695..2869
                     /region_name="EB1_binding"
                     /note="EB-1 Binding Domain; pfam05937"
                     /db_xref="CDD:399141"
     CDS             1..2869
                     /gene="APC"
                     /coded_by="XM_061158201.1:347..8956"
                     /db_xref="GeneID:133066790"
ORIGIN      
        1 maaasydqll kqvealkmen snlrqeledn snhltklete asnmkevlkq lqgsiedeam
       61 assgqidlle rlkelnldss nfpgvklrsk mslrsygsre gsvssrsgec spvpmgsfpr
      121 rgfvngsren tgyleeleke rsllladldk eekekdwyya qlqnltkrid slpltenfsl
      181 qtdmtrrqle yearqirvam eeqlgtcqdm ekraqrritr iqqiekdilr irqllqsqat
      241 eaerssqskh eagsheaerq negqgvaein matsgsgqgs ttridhetas vlssssthsa
      301 prrltshlgt kvemvyslls mlgthdkddm srtllamsss qdscismrqs gclplliqll
      361 hgndkdsvll gnsrgskear arasaalhni ihsqpddkrg rreirvlhll eqiraycetc
      421 wewqeaheqg mdqdknpmpa pvehqicpav cvlmklsfde ehrhamnelg rkatrgissq
      481 elgqglsggl qaiaellqvd cemygltndh ysitlrryag maltnltfgd vankatlcsm
      541 kgcmralvaq lksdsedlqq viasvlrnls wradvnskkt lrevgsvkal mecalevkke
      601 stlksvlsal wnlsahcten kadicavgga laflvgtlty rsqtntlaii esgggilrnv
      661 ssliatnedh rqilrenncl qtllqhlksh sltivsnacg tlwnlsarnp kdqealwdmg
      721 avsmlknlih skhkmiamgs aaalrnlman rpakykdani mspgsslpsl hvrkqkalea
      781 eldaqhlset fdnidnlspk ashrskqrhk qnlygdygfd snrhddnrsd nfntgnmtvl
      841 spylnttvlp sssssrgsld ssrsekdrsl erergislgn yhpatenpgt sskrglqist
      901 taaqiakvme evsaihtsqe drssgsttel hcgtdernal rrsstahtha ntynftksen
      961 snrtcpipya kveykrssnd slnsvsssdg ygkrgqmkps iesyseddes kfcsygqypa
     1021 dlahkihsan hmddndgeld tpinyslkys deqlnsgrqs psqnerwarp khiledeikp
     1081 neqrqsrsqs taypvypest ddkhlkfqph fgqqecvspy rsraangsep nrvgsnhgis
     1141 qnvnqslcqe ddyeddkptn yseryseegq heeeerptny sikyseekhh vdqpidyslk
     1201 yttdipssqk pafsfsknss gqstktehis sssentstps snakrqnqlh pssaqsrssq
     1261 tpkatsssck vpsinqetiq tycvedtpic fsrcsslssl ssaedeigcd qttqeadpan
     1321 slqiaeikdn sgprpnedsv skvpavsqhv rtkssrlqas glssesarhk avefssgaks
     1381 psksgaqtpk sppehyvqet plmfsrctsv ssldsfesrs iassvqsepc sgmvsgiisp
     1441 sdlpdspgqt mppsrsktpp ppppppqtvq tkqevpknka psaekresgp kqaavnaavq
     1501 rvqvlpdadt llhfatestp dgfscsssls alsldepfiq kdvelrimpp vqendngnet
     1561 eseqpeesne nqekeaekpt dsekdildes ddddieilee ciisamptks srkakkpaqt
     1621 tsklpppvar kpsqlpvykl lpsqnrlqaq khvsftpgdd mprvycvegt pinfstatsl
     1681 sdltiesppn elaagegvra gaqssefekr dtiptegrst deaqrgkass vtvpelddnk
     1741 teegdilaec insampkgks hkpfrvkkim dqvqqasmss sgtnknqldg ktkkltspvk
     1801 pipqnteyrt rvrkntdskn nlnaernfse nkdskkqhlk nnskdfndkl pnnedrvrgs
     1861 ftfdsphhyt piegtpycfs rndslssldf ddddvdlsre kaelrkgken keseatvtnh
     1921 teltsnqqsa nktpavtkqp inrgqsksvl qkqstfpqss kdipdrgaat deklqnfaie
     1981 ntpvcfsrns slsslsdidq ennnnnkene piketeppds qgeaskpqas gyapksfhve
     2041 dtpvcfsrns slsslsidse ddllqeciss ampkkkkpsr lkadnekhsp rnmggilaed
     2101 ltldlkdiqr pdsehglspd senfdwkaiq egansivssl hqaaaaacls rqassdsdsi
     2161 lslksgislg spfhltpdqe ekpftsnkgp rilkpgekst letkklesen kgikggkkvy
     2221 kslitgkvrs nseissqmkq plqtnmpais rgrtmihipg vrnsssstsp vskkgpplkt
     2281 paskspsegq aattsprgtk psvkselspv trqasqtags nkgpsrsgsr dstpsrpaqq
     2341 plsrpmqspg rnsispgrng isppnklsql prtsspstas tkssgsgkms ytspgrqmsq
     2401 qnltkqtgls kngsgiprse saskglnqms nsngsnkkve lsrmsstkss gsesdrserp
     2461 vlvrqstfik eapsptlrrk leesasfesl spssrpdspt rsqahtpvls pslpdmslst
     2521 hssvqsggwr klppnlspti eyndgrpvkr hdiarshses psrlpinrsg twkrehskhs
     2581 sslprvstwr rtgssssils assessekak sedekhvnsi sgskqtkenq vstkgtwrki
     2641 keseisptss tsqttssgat ngaesktliy qmapavskte dvwvriedcp innprsgrsp
     2701 tgntppvidt vsekgnpnpk dskdnqgkqn vsngsaptrt mglenrlnsf iqvdppdqkg
     2761 teakpgqsnn pvpasetnes siaertpfss sssskhssps gtvaarvspf nynpsprkss
     2821 adgtsarpsq iptpvstttk krdskpdsae pggtqspkrh sgsylvtsv
//
LOCUS       XP_061014185            2869 aa            linear   MAM 02-DEC-2023
DEFINITION  adenomatous polyposis coli protein isoform X2 [Dama dama].
ACCESSION   XP_061014185
VERSION     XP_061014185.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158202.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2869
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2869
                     /product="adenomatous polyposis coli protein isoform X2"
                     /calculated_mol_wt=313959
     Region          4..55
                     /region_name="APC_N_CC"
                     /note="Coiled-coil N-terminus of APC, dimerization domain;
                     pfam16689"
                     /db_xref="CDD:435517"
     Region          <8..268
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          127..207
                     /region_name="Suppressor_APC"
                     /note="Adenomatous polyposis coli tumour suppressor
                     protein; pfam11414"
                     /db_xref="CDD:463275"
     Region          340..392
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          393..466
                     /region_name="APC_rep"
                     /note="Adenomatous polyposis coli (APC) repeat; pfam18797"
                     /db_xref="CDD:465870"
     Region          490..526
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          530..571
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          534..571
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          581..613
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(604,608,612,651,655,659,696,700,704)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          621..662
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          667..707
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          671..705
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          709..749
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          713..749
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          750..1037
                     /region_name="Arm_APC_u3"
                     /note="Armadillo-associated region on APC; pfam16629"
                     /db_xref="CDD:435476"
     Region          1054..1153
                     /region_name="APC_u5"
                     /note="Unstructured region on APC between 1st and 2nd
                     catenin-bdg motifs; pfam16630"
                     /db_xref="CDD:406923"
     Region          <1202..1392
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          1303..1388
                     /region_name="APC_u9"
                     /note="Unstructured region on APC between 1st two
                     creatine-rich regions; pfam16633"
                     /db_xref="CDD:435478"
     Region          <1358..1725
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          1391..1413
                     /region_name="APC_r"
                     /note="APC repeat; pfam05923"
                     /db_xref="CDD:461781"
     Region          1660..1683
                     /region_name="APC_r"
                     /note="APC repeat; pfam05923"
                     /db_xref="CDD:461781"
     Region          1685..1738
                     /region_name="APC_u13"
                     /note="Unstructured region on APC between APC_crr and
                     SAMP; pfam16634"
                     /db_xref="CDD:406927"
     Region          1742..1760
                     /region_name="SAMP"
                     /note="SAMP Motif; pfam05924"
                     /db_xref="CDD:461782"
     Region          1769..1862
                     /region_name="APC_u14"
                     /note="Unstructured region on APC between SAMP and
                     APC_crr; pfam16635"
                     /db_xref="CDD:435479"
     Region          1896..1970
                     /region_name="APC_u15"
                     /note="Unstructured region on APC between APC_crr regions
                     5 and 6; pfam16636"
                     /db_xref="CDD:435480"
     Region          2058..2077
                     /region_name="SAMP"
                     /note="SAMP Motif; pfam05924"
                     /db_xref="CDD:461782"
     Region          2248..2593
                     /region_name="APC_basic"
                     /note="APC basic domain; pfam05956"
                     /db_xref="CDD:428690"
     Region          2695..2869
                     /region_name="EB1_binding"
                     /note="EB-1 Binding Domain; pfam05937"
                     /db_xref="CDD:399141"
     CDS             1..2869
                     /gene="APC"
                     /coded_by="XM_061158202.1:175..8784"
                     /db_xref="GeneID:133066790"
ORIGIN      
        1 maaasydqll kqvealkmen snlrqeledn snhltklete asnmkevlkq lqgsiedeam
       61 assgqidlle rlkelnldss nfpgvklrsk mslrsygsre gsvssrsgec spvpmgsfpr
      121 rgfvngsren tgyleeleke rsllladldk eekekdwyya qlqnltkrid slpltenfsl
      181 qtdmtrrqle yearqirvam eeqlgtcqdm ekraqrritr iqqiekdilr irqllqsqat
      241 eaerssqskh eagsheaerq negqgvaein matsgsgqgs ttridhetas vlssssthsa
      301 prrltshlgt kvemvyslls mlgthdkddm srtllamsss qdscismrqs gclplliqll
      361 hgndkdsvll gnsrgskear arasaalhni ihsqpddkrg rreirvlhll eqiraycetc
      421 wewqeaheqg mdqdknpmpa pvehqicpav cvlmklsfde ehrhamnelg rkatrgissq
      481 elgqglsggl qaiaellqvd cemygltndh ysitlrryag maltnltfgd vankatlcsm
      541 kgcmralvaq lksdsedlqq viasvlrnls wradvnskkt lrevgsvkal mecalevkke
      601 stlksvlsal wnlsahcten kadicavgga laflvgtlty rsqtntlaii esgggilrnv
      661 ssliatnedh rqilrenncl qtllqhlksh sltivsnacg tlwnlsarnp kdqealwdmg
      721 avsmlknlih skhkmiamgs aaalrnlman rpakykdani mspgsslpsl hvrkqkalea
      781 eldaqhlset fdnidnlspk ashrskqrhk qnlygdygfd snrhddnrsd nfntgnmtvl
      841 spylnttvlp sssssrgsld ssrsekdrsl erergislgn yhpatenpgt sskrglqist
      901 taaqiakvme evsaihtsqe drssgsttel hcgtdernal rrsstahtha ntynftksen
      961 snrtcpipya kveykrssnd slnsvsssdg ygkrgqmkps iesyseddes kfcsygqypa
     1021 dlahkihsan hmddndgeld tpinyslkys deqlnsgrqs psqnerwarp khiledeikp
     1081 neqrqsrsqs taypvypest ddkhlkfqph fgqqecvspy rsraangsep nrvgsnhgis
     1141 qnvnqslcqe ddyeddkptn yseryseegq heeeerptny sikyseekhh vdqpidyslk
     1201 yttdipssqk pafsfsknss gqstktehis sssentstps snakrqnqlh pssaqsrssq
     1261 tpkatsssck vpsinqetiq tycvedtpic fsrcsslssl ssaedeigcd qttqeadpan
     1321 slqiaeikdn sgprpnedsv skvpavsqhv rtkssrlqas glssesarhk avefssgaks
     1381 psksgaqtpk sppehyvqet plmfsrctsv ssldsfesrs iassvqsepc sgmvsgiisp
     1441 sdlpdspgqt mppsrsktpp ppppppqtvq tkqevpknka psaekresgp kqaavnaavq
     1501 rvqvlpdadt llhfatestp dgfscsssls alsldepfiq kdvelrimpp vqendngnet
     1561 eseqpeesne nqekeaekpt dsekdildes ddddieilee ciisamptks srkakkpaqt
     1621 tsklpppvar kpsqlpvykl lpsqnrlqaq khvsftpgdd mprvycvegt pinfstatsl
     1681 sdltiesppn elaagegvra gaqssefekr dtiptegrst deaqrgkass vtvpelddnk
     1741 teegdilaec insampkgks hkpfrvkkim dqvqqasmss sgtnknqldg ktkkltspvk
     1801 pipqnteyrt rvrkntdskn nlnaernfse nkdskkqhlk nnskdfndkl pnnedrvrgs
     1861 ftfdsphhyt piegtpycfs rndslssldf ddddvdlsre kaelrkgken keseatvtnh
     1921 teltsnqqsa nktpavtkqp inrgqsksvl qkqstfpqss kdipdrgaat deklqnfaie
     1981 ntpvcfsrns slsslsdidq ennnnnkene piketeppds qgeaskpqas gyapksfhve
     2041 dtpvcfsrns slsslsidse ddllqeciss ampkkkkpsr lkadnekhsp rnmggilaed
     2101 ltldlkdiqr pdsehglspd senfdwkaiq egansivssl hqaaaaacls rqassdsdsi
     2161 lslksgislg spfhltpdqe ekpftsnkgp rilkpgekst letkklesen kgikggkkvy
     2221 kslitgkvrs nseissqmkq plqtnmpais rgrtmihipg vrnsssstsp vskkgpplkt
     2281 paskspsegq aattsprgtk psvkselspv trqasqtags nkgpsrsgsr dstpsrpaqq
     2341 plsrpmqspg rnsispgrng isppnklsql prtsspstas tkssgsgkms ytspgrqmsq
     2401 qnltkqtgls kngsgiprse saskglnqms nsngsnkkve lsrmsstkss gsesdrserp
     2461 vlvrqstfik eapsptlrrk leesasfesl spssrpdspt rsqahtpvls pslpdmslst
     2521 hssvqsggwr klppnlspti eyndgrpvkr hdiarshses psrlpinrsg twkrehskhs
     2581 sslprvstwr rtgssssils assessekak sedekhvnsi sgskqtkenq vstkgtwrki
     2641 keseisptss tsqttssgat ngaesktliy qmapavskte dvwvriedcp innprsgrsp
     2701 tgntppvidt vsekgnpnpk dskdnqgkqn vsngsaptrt mglenrlnsf iqvdppdqkg
     2761 teakpgqsnn pvpasetnes siaertpfss sssskhssps gtvaarvspf nynpsprkss
     2821 adgtsarpsq iptpvstttk krdskpdsae pggtqspkrh sgsylvtsv
//
LOCUS       XP_061014186            2869 aa            linear   MAM 02-DEC-2023
DEFINITION  adenomatous polyposis coli protein isoform X2 [Dama dama].
ACCESSION   XP_061014186
VERSION     XP_061014186.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158203.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2869
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2869
                     /product="adenomatous polyposis coli protein isoform X2"
                     /calculated_mol_wt=313959
     Region          4..55
                     /region_name="APC_N_CC"
                     /note="Coiled-coil N-terminus of APC, dimerization domain;
                     pfam16689"
                     /db_xref="CDD:435517"
     Region          <8..268
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          127..207
                     /region_name="Suppressor_APC"
                     /note="Adenomatous polyposis coli tumour suppressor
                     protein; pfam11414"
                     /db_xref="CDD:463275"
     Region          340..392
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          393..466
                     /region_name="APC_rep"
                     /note="Adenomatous polyposis coli (APC) repeat; pfam18797"
                     /db_xref="CDD:465870"
     Region          490..526
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          530..571
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          534..571
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          581..613
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(604,608,612,651,655,659,696,700,704)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          621..662
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          667..707
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          671..705
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          709..749
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          713..749
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          750..1037
                     /region_name="Arm_APC_u3"
                     /note="Armadillo-associated region on APC; pfam16629"
                     /db_xref="CDD:435476"
     Region          1054..1153
                     /region_name="APC_u5"
                     /note="Unstructured region on APC between 1st and 2nd
                     catenin-bdg motifs; pfam16630"
                     /db_xref="CDD:406923"
     Region          <1202..1392
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          1303..1388
                     /region_name="APC_u9"
                     /note="Unstructured region on APC between 1st two
                     creatine-rich regions; pfam16633"
                     /db_xref="CDD:435478"
     Region          <1358..1725
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          1391..1413
                     /region_name="APC_r"
                     /note="APC repeat; pfam05923"
                     /db_xref="CDD:461781"
     Region          1660..1683
                     /region_name="APC_r"
                     /note="APC repeat; pfam05923"
                     /db_xref="CDD:461781"
     Region          1685..1738
                     /region_name="APC_u13"
                     /note="Unstructured region on APC between APC_crr and
                     SAMP; pfam16634"
                     /db_xref="CDD:406927"
     Region          1742..1760
                     /region_name="SAMP"
                     /note="SAMP Motif; pfam05924"
                     /db_xref="CDD:461782"
     Region          1769..1862
                     /region_name="APC_u14"
                     /note="Unstructured region on APC between SAMP and
                     APC_crr; pfam16635"
                     /db_xref="CDD:435479"
     Region          1896..1970
                     /region_name="APC_u15"
                     /note="Unstructured region on APC between APC_crr regions
                     5 and 6; pfam16636"
                     /db_xref="CDD:435480"
     Region          2058..2077
                     /region_name="SAMP"
                     /note="SAMP Motif; pfam05924"
                     /db_xref="CDD:461782"
     Region          2248..2593
                     /region_name="APC_basic"
                     /note="APC basic domain; pfam05956"
                     /db_xref="CDD:428690"
     Region          2695..2869
                     /region_name="EB1_binding"
                     /note="EB-1 Binding Domain; pfam05937"
                     /db_xref="CDD:399141"
     CDS             1..2869
                     /gene="APC"
                     /coded_by="XM_061158203.1:38..8647"
                     /db_xref="GeneID:133066790"
ORIGIN      
        1 maaasydqll kqvealkmen snlrqeledn snhltklete asnmkevlkq lqgsiedeam
       61 assgqidlle rlkelnldss nfpgvklrsk mslrsygsre gsvssrsgec spvpmgsfpr
      121 rgfvngsren tgyleeleke rsllladldk eekekdwyya qlqnltkrid slpltenfsl
      181 qtdmtrrqle yearqirvam eeqlgtcqdm ekraqrritr iqqiekdilr irqllqsqat
      241 eaerssqskh eagsheaerq negqgvaein matsgsgqgs ttridhetas vlssssthsa
      301 prrltshlgt kvemvyslls mlgthdkddm srtllamsss qdscismrqs gclplliqll
      361 hgndkdsvll gnsrgskear arasaalhni ihsqpddkrg rreirvlhll eqiraycetc
      421 wewqeaheqg mdqdknpmpa pvehqicpav cvlmklsfde ehrhamnelg rkatrgissq
      481 elgqglsggl qaiaellqvd cemygltndh ysitlrryag maltnltfgd vankatlcsm
      541 kgcmralvaq lksdsedlqq viasvlrnls wradvnskkt lrevgsvkal mecalevkke
      601 stlksvlsal wnlsahcten kadicavgga laflvgtlty rsqtntlaii esgggilrnv
      661 ssliatnedh rqilrenncl qtllqhlksh sltivsnacg tlwnlsarnp kdqealwdmg
      721 avsmlknlih skhkmiamgs aaalrnlman rpakykdani mspgsslpsl hvrkqkalea
      781 eldaqhlset fdnidnlspk ashrskqrhk qnlygdygfd snrhddnrsd nfntgnmtvl
      841 spylnttvlp sssssrgsld ssrsekdrsl erergislgn yhpatenpgt sskrglqist
      901 taaqiakvme evsaihtsqe drssgsttel hcgtdernal rrsstahtha ntynftksen
      961 snrtcpipya kveykrssnd slnsvsssdg ygkrgqmkps iesyseddes kfcsygqypa
     1021 dlahkihsan hmddndgeld tpinyslkys deqlnsgrqs psqnerwarp khiledeikp
     1081 neqrqsrsqs taypvypest ddkhlkfqph fgqqecvspy rsraangsep nrvgsnhgis
     1141 qnvnqslcqe ddyeddkptn yseryseegq heeeerptny sikyseekhh vdqpidyslk
     1201 yttdipssqk pafsfsknss gqstktehis sssentstps snakrqnqlh pssaqsrssq
     1261 tpkatsssck vpsinqetiq tycvedtpic fsrcsslssl ssaedeigcd qttqeadpan
     1321 slqiaeikdn sgprpnedsv skvpavsqhv rtkssrlqas glssesarhk avefssgaks
     1381 psksgaqtpk sppehyvqet plmfsrctsv ssldsfesrs iassvqsepc sgmvsgiisp
     1441 sdlpdspgqt mppsrsktpp ppppppqtvq tkqevpknka psaekresgp kqaavnaavq
     1501 rvqvlpdadt llhfatestp dgfscsssls alsldepfiq kdvelrimpp vqendngnet
     1561 eseqpeesne nqekeaekpt dsekdildes ddddieilee ciisamptks srkakkpaqt
     1621 tsklpppvar kpsqlpvykl lpsqnrlqaq khvsftpgdd mprvycvegt pinfstatsl
     1681 sdltiesppn elaagegvra gaqssefekr dtiptegrst deaqrgkass vtvpelddnk
     1741 teegdilaec insampkgks hkpfrvkkim dqvqqasmss sgtnknqldg ktkkltspvk
     1801 pipqnteyrt rvrkntdskn nlnaernfse nkdskkqhlk nnskdfndkl pnnedrvrgs
     1861 ftfdsphhyt piegtpycfs rndslssldf ddddvdlsre kaelrkgken keseatvtnh
     1921 teltsnqqsa nktpavtkqp inrgqsksvl qkqstfpqss kdipdrgaat deklqnfaie
     1981 ntpvcfsrns slsslsdidq ennnnnkene piketeppds qgeaskpqas gyapksfhve
     2041 dtpvcfsrns slsslsidse ddllqeciss ampkkkkpsr lkadnekhsp rnmggilaed
     2101 ltldlkdiqr pdsehglspd senfdwkaiq egansivssl hqaaaaacls rqassdsdsi
     2161 lslksgislg spfhltpdqe ekpftsnkgp rilkpgekst letkklesen kgikggkkvy
     2221 kslitgkvrs nseissqmkq plqtnmpais rgrtmihipg vrnsssstsp vskkgpplkt
     2281 paskspsegq aattsprgtk psvkselspv trqasqtags nkgpsrsgsr dstpsrpaqq
     2341 plsrpmqspg rnsispgrng isppnklsql prtsspstas tkssgsgkms ytspgrqmsq
     2401 qnltkqtgls kngsgiprse saskglnqms nsngsnkkve lsrmsstkss gsesdrserp
     2461 vlvrqstfik eapsptlrrk leesasfesl spssrpdspt rsqahtpvls pslpdmslst
     2521 hssvqsggwr klppnlspti eyndgrpvkr hdiarshses psrlpinrsg twkrehskhs
     2581 sslprvstwr rtgssssils assessekak sedekhvnsi sgskqtkenq vstkgtwrki
     2641 keseisptss tsqttssgat ngaesktliy qmapavskte dvwvriedcp innprsgrsp
     2701 tgntppvidt vsekgnpnpk dskdnqgkqn vsngsaptrt mglenrlnsf iqvdppdqkg
     2761 teakpgqsnn pvpasetnes siaertpfss sssskhssps gtvaarvspf nynpsprkss
     2821 adgtsarpsq iptpvstttk krdskpdsae pggtqspkrh sgsylvtsv
//
LOCUS       XP_061014187            2861 aa            linear   MAM 02-DEC-2023
DEFINITION  adenomatous polyposis coli protein isoform X3 [Dama dama].
ACCESSION   XP_061014187
VERSION     XP_061014187.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158204.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2861
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2861
                     /product="adenomatous polyposis coli protein isoform X3"
                     /calculated_mol_wt=312629
     Region          137..217
                     /region_name="Suppressor_APC"
                     /note="Adenomatous polyposis coli tumour suppressor
                     protein; pfam11414"
                     /db_xref="CDD:463275"
     Region          350..402
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          403..476
                     /region_name="APC_rep"
                     /note="Adenomatous polyposis coli (APC) repeat; pfam18797"
                     /db_xref="CDD:465870"
     Region          475..518
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          522..563
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          526..563
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          573..605
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(596,600,604,643,647,651,688,692,696)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          613..654
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          659..699
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          663..697
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          701..741
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          705..741
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          742..1029
                     /region_name="Arm_APC_u3"
                     /note="Armadillo-associated region on APC; pfam16629"
                     /db_xref="CDD:435476"
     Region          1046..1145
                     /region_name="APC_u5"
                     /note="Unstructured region on APC between 1st and 2nd
                     catenin-bdg motifs; pfam16630"
                     /db_xref="CDD:406923"
     Region          <1194..1384
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          1295..1380
                     /region_name="APC_u9"
                     /note="Unstructured region on APC between 1st two
                     creatine-rich regions; pfam16633"
                     /db_xref="CDD:435478"
     Region          1383..1405
                     /region_name="APC_r"
                     /note="APC repeat; pfam05923"
                     /db_xref="CDD:461781"
     Region          1652..1675
                     /region_name="APC_r"
                     /note="APC repeat; pfam05923"
                     /db_xref="CDD:461781"
     Region          1677..1730
                     /region_name="APC_u13"
                     /note="Unstructured region on APC between APC_crr and
                     SAMP; pfam16634"
                     /db_xref="CDD:406927"
     Region          1734..1752
                     /region_name="SAMP"
                     /note="SAMP Motif; pfam05924"
                     /db_xref="CDD:461782"
     Region          1761..1854
                     /region_name="APC_u14"
                     /note="Unstructured region on APC between SAMP and
                     APC_crr; pfam16635"
                     /db_xref="CDD:435479"
     Region          1888..1962
                     /region_name="APC_u15"
                     /note="Unstructured region on APC between APC_crr regions
                     5 and 6; pfam16636"
                     /db_xref="CDD:435480"
     Region          2050..2069
                     /region_name="SAMP"
                     /note="SAMP Motif; pfam05924"
                     /db_xref="CDD:461782"
     Region          2240..2585
                     /region_name="APC_basic"
                     /note="APC basic domain; pfam05956"
                     /db_xref="CDD:428690"
     Region          2687..2861
                     /region_name="EB1_binding"
                     /note="EB-1 Binding Domain; pfam05937"
                     /db_xref="CDD:399141"
     CDS             1..2861
                     /gene="APC"
                     /coded_by="XM_061158204.1:126..8711"
                     /db_xref="GeneID:133066790"
ORIGIN      
        1 mytpvcssav aalptsvppc avgsrssggg rgcvrqerkr pgcvrasvrg asvwqevlkq
       61 lqgsiedeam assgqidlle rlkelnldss nfpgvklrsk mslrsygsre gsvssrsgec
      121 spvpmgsfpr rgfvngsren tgyleeleke rsllladldk eekekdwyya qlqnltkrid
      181 slpltenfsl qtdmtrrqle yearqirvam eeqlgtcqdm ekraqrritr iqqiekdilr
      241 irqllqsqat eaerssqskh eagsheaerq negqgvaein matsgsgqgs ttridhetas
      301 vlssssthsa prrltshlgt kvemvyslls mlgthdkddm srtllamsss qdscismrqs
      361 gclplliqll hgndkdsvll gnsrgskear arasaalhni ihsqpddkrg rreirvlhll
      421 eqiraycetc wewqeaheqg mdqdknpmpa pvehqicpav cvlmklsfde ehrhamnelg
      481 glqaiaellq vdcemygltn dhysitlrry agmaltnltf gdvankatlc smkgcmralv
      541 aqlksdsedl qqviasvlrn lswradvnsk ktlrevgsvk almecalevk kestlksvls
      601 alwnlsahct enkadicavg galaflvgtl tyrsqtntla iiesgggilr nvssliatne
      661 dhrqilrenn clqtllqhlk shsltivsna cgtlwnlsar npkdqealwd mgavsmlknl
      721 ihskhkmiam gsaaalrnlm anrpakykda nimspgsslp slhvrkqkal eaeldaqhls
      781 etfdnidnls pkashrskqr hkqnlygdyg fdsnrhddnr sdnfntgnmt vlspylnttv
      841 lpsssssrgs ldssrsekdr slerergisl gnyhpatenp gtsskrglqi sttaaqiakv
      901 meevsaihts qedrssgstt elhcgtdern alrrsstaht hantynftks ensnrtcpip
      961 yakveykrss ndslnsvsss dgygkrgqmk psiesysedd eskfcsygqy padlahkihs
     1021 anhmddndge ldtpinyslk ysdeqlnsgr qspsqnerwa rpkhiledei kpneqrqsrs
     1081 qstaypvype stddkhlkfq phfgqqecvs pyrsraangs epnrvgsnhg isqnvnqslc
     1141 qeddyeddkp tnyserysee gqheeeerpt nysikyseek hhvdqpidys lkyttdipss
     1201 qkpafsfskn ssgqstkteh issssentst pssnakrqnq lhpssaqsrs sqtpkatsss
     1261 ckvpsinqet iqtycvedtp icfsrcssls slssaedeig cdqttqeadp anslqiaeik
     1321 dnsgprpned svskvpavsq hvrtkssrlq asglssesar hkavefssga kspsksgaqt
     1381 pksppehyvq etplmfsrct svssldsfes rsiassvqse pcsgmvsgii spsdlpdspg
     1441 qtmppsrskt ppppppppqt vqtkqevpkn kapsaekres gpkqaavnaa vqrvqvlpda
     1501 dtllhfates tpdgfscsss lsalsldepf iqkdvelrim ppvqendngn eteseqpees
     1561 nenqekeaek ptdsekdild esddddieil eeciisampt kssrkakkpa qttsklpppv
     1621 arkpsqlpvy kllpsqnrlq aqkhvsftpg ddmprvycve gtpinfstat slsdltiesp
     1681 pnelaagegv ragaqssefe krdtiptegr stdeaqrgka ssvtvpeldd nkteegdila
     1741 ecinsampkg kshkpfrvkk imdqvqqasm sssgtnknql dgktkkltsp vkpipqntey
     1801 rtrvrkntds knnlnaernf senkdskkqh lknnskdfnd klpnnedrvr gsftfdsphh
     1861 ytpiegtpyc fsrndslssl dfddddvdls rekaelrkgk enkeseatvt nhteltsnqq
     1921 sanktpavtk qpinrgqsks vlqkqstfpq sskdipdrga atdeklqnfa ientpvcfsr
     1981 nsslsslsdi dqennnnnke nepiketepp dsqgeaskpq asgyapksfh vedtpvcfsr
     2041 nsslsslsid seddllqeci ssampkkkkp srlkadnekh sprnmggila edltldlkdi
     2101 qrpdsehgls pdsenfdwka iqegansivs slhqaaaaac lsrqassdsd silslksgis
     2161 lgspfhltpd qeekpftsnk gprilkpgek stletkkles enkgikggkk vykslitgkv
     2221 rsnseissqm kqplqtnmpa isrgrtmihi pgvrnsssst spvskkgppl ktpaskspse
     2281 gqaattsprg tkpsvksels pvtrqasqta gsnkgpsrsg srdstpsrpa qqplsrpmqs
     2341 pgrnsispgr ngisppnkls qlprtsspst astkssgsgk msytspgrqm sqqnltkqtg
     2401 lskngsgipr sesaskglnq msnsngsnkk velsrmsstk ssgsesdrse rpvlvrqstf
     2461 ikeapsptlr rkleesasfe slspssrpds ptrsqahtpv lspslpdmsl sthssvqsgg
     2521 wrklppnlsp tieyndgrpv krhdiarshs espsrlpinr sgtwkrehsk hssslprvst
     2581 wrrtgssssi lsassessek aksedekhvn sisgskqtke nqvstkgtwr kikeseispt
     2641 sstsqttssg atngaesktl iyqmapavsk tedvwvried cpinnprsgr sptgntppvi
     2701 dtvsekgnpn pkdskdnqgk qnvsngsapt rtmglenrln sfiqvdppdq kgteakpgqs
     2761 nnpvpasetn essiaertpf sssssskhss psgtvaarvs pfnynpsprk ssadgtsarp
     2821 sqiptpvstt tkkrdskpds aepggtqspk rhsgsylvts v
//
LOCUS       XP_061014188            2851 aa            linear   MAM 02-DEC-2023
DEFINITION  adenomatous polyposis coli protein isoform X4 [Dama dama].
ACCESSION   XP_061014188
VERSION     XP_061014188.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158205.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2851
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2851
                     /product="adenomatous polyposis coli protein isoform X4"
                     /calculated_mol_wt=312132
     Region          4..55
                     /region_name="APC_N_CC"
                     /note="Coiled-coil N-terminus of APC, dimerization domain;
                     pfam16689"
                     /db_xref="CDD:435517"
     Region          <8..268
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          127..207
                     /region_name="Suppressor_APC"
                     /note="Adenomatous polyposis coli tumour suppressor
                     protein; pfam11414"
                     /db_xref="CDD:463275"
     Region          340..392
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          393..466
                     /region_name="APC_rep"
                     /note="Adenomatous polyposis coli (APC) repeat; pfam18797"
                     /db_xref="CDD:465870"
     Region          465..508
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          512..553
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          516..553
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          563..595
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(586,590,594,633,637,641,678,682,686)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          603..644
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          649..689
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          653..687
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          691..731
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          695..731
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          732..1019
                     /region_name="Arm_APC_u3"
                     /note="Armadillo-associated region on APC; pfam16629"
                     /db_xref="CDD:435476"
     Region          1036..1135
                     /region_name="APC_u5"
                     /note="Unstructured region on APC between 1st and 2nd
                     catenin-bdg motifs; pfam16630"
                     /db_xref="CDD:406923"
     Region          <1184..1374
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          1285..1370
                     /region_name="APC_u9"
                     /note="Unstructured region on APC between 1st two
                     creatine-rich regions; pfam16633"
                     /db_xref="CDD:435478"
     Region          1373..1395
                     /region_name="APC_r"
                     /note="APC repeat; pfam05923"
                     /db_xref="CDD:461781"
     Region          1642..1665
                     /region_name="APC_r"
                     /note="APC repeat; pfam05923"
                     /db_xref="CDD:461781"
     Region          1667..1720
                     /region_name="APC_u13"
                     /note="Unstructured region on APC between APC_crr and
                     SAMP; pfam16634"
                     /db_xref="CDD:406927"
     Region          1724..1742
                     /region_name="SAMP"
                     /note="SAMP Motif; pfam05924"
                     /db_xref="CDD:461782"
     Region          1751..1844
                     /region_name="APC_u14"
                     /note="Unstructured region on APC between SAMP and
                     APC_crr; pfam16635"
                     /db_xref="CDD:435479"
     Region          1878..1952
                     /region_name="APC_u15"
                     /note="Unstructured region on APC between APC_crr regions
                     5 and 6; pfam16636"
                     /db_xref="CDD:435480"
     Region          2040..2059
                     /region_name="SAMP"
                     /note="SAMP Motif; pfam05924"
                     /db_xref="CDD:461782"
     Region          2230..2575
                     /region_name="APC_basic"
                     /note="APC basic domain; pfam05956"
                     /db_xref="CDD:428690"
     Region          2677..2851
                     /region_name="EB1_binding"
                     /note="EB-1 Binding Domain; pfam05937"
                     /db_xref="CDD:399141"
     CDS             1..2851
                     /gene="APC"
                     /coded_by="XM_061158205.1:177..8732"
                     /db_xref="GeneID:133066790"
ORIGIN      
        1 maaasydqll kqvealkmen snlrqeledn snhltklete asnmkevlkq lqgsiedeam
       61 assgqidlle rlkelnldss nfpgvklrsk mslrsygsre gsvssrsgec spvpmgsfpr
      121 rgfvngsren tgyleeleke rsllladldk eekekdwyya qlqnltkrid slpltenfsl
      181 qtdmtrrqle yearqirvam eeqlgtcqdm ekraqrritr iqqiekdilr irqllqsqat
      241 eaerssqskh eagsheaerq negqgvaein matsgsgqgs ttridhetas vlssssthsa
      301 prrltshlgt kvemvyslls mlgthdkddm srtllamsss qdscismrqs gclplliqll
      361 hgndkdsvll gnsrgskear arasaalhni ihsqpddkrg rreirvlhll eqiraycetc
      421 wewqeaheqg mdqdknpmpa pvehqicpav cvlmklsfde ehrhamnelg glqaiaellq
      481 vdcemygltn dhysitlrry agmaltnltf gdvankatlc smkgcmralv aqlksdsedl
      541 qqviasvlrn lswradvnsk ktlrevgsvk almecalevk kestlksvls alwnlsahct
      601 enkadicavg galaflvgtl tyrsqtntla iiesgggilr nvssliatne dhrqilrenn
      661 clqtllqhlk shsltivsna cgtlwnlsar npkdqealwd mgavsmlknl ihskhkmiam
      721 gsaaalrnlm anrpakykda nimspgsslp slhvrkqkal eaeldaqhls etfdnidnls
      781 pkashrskqr hkqnlygdyg fdsnrhddnr sdnfntgnmt vlspylnttv lpsssssrgs
      841 ldssrsekdr slerergisl gnyhpatenp gtsskrglqi sttaaqiakv meevsaihts
      901 qedrssgstt elhcgtdern alrrsstaht hantynftks ensnrtcpip yakveykrss
      961 ndslnsvsss dgygkrgqmk psiesysedd eskfcsygqy padlahkihs anhmddndge
     1021 ldtpinyslk ysdeqlnsgr qspsqnerwa rpkhiledei kpneqrqsrs qstaypvype
     1081 stddkhlkfq phfgqqecvs pyrsraangs epnrvgsnhg isqnvnqslc qeddyeddkp
     1141 tnyserysee gqheeeerpt nysikyseek hhvdqpidys lkyttdipss qkpafsfskn
     1201 ssgqstkteh issssentst pssnakrqnq lhpssaqsrs sqtpkatsss ckvpsinqet
     1261 iqtycvedtp icfsrcssls slssaedeig cdqttqeadp anslqiaeik dnsgprpned
     1321 svskvpavsq hvrtkssrlq asglssesar hkavefssga kspsksgaqt pksppehyvq
     1381 etplmfsrct svssldsfes rsiassvqse pcsgmvsgii spsdlpdspg qtmppsrskt
     1441 ppppppppqt vqtkqevpkn kapsaekres gpkqaavnaa vqrvqvlpda dtllhfates
     1501 tpdgfscsss lsalsldepf iqkdvelrim ppvqendngn eteseqpees nenqekeaek
     1561 ptdsekdild esddddieil eeciisampt kssrkakkpa qttsklpppv arkpsqlpvy
     1621 kllpsqnrlq aqkhvsftpg ddmprvycve gtpinfstat slsdltiesp pnelaagegv
     1681 ragaqssefe krdtiptegr stdeaqrgka ssvtvpeldd nkteegdila ecinsampkg
     1741 kshkpfrvkk imdqvqqasm sssgtnknql dgktkkltsp vkpipqntey rtrvrkntds
     1801 knnlnaernf senkdskkqh lknnskdfnd klpnnedrvr gsftfdsphh ytpiegtpyc
     1861 fsrndslssl dfddddvdls rekaelrkgk enkeseatvt nhteltsnqq sanktpavtk
     1921 qpinrgqsks vlqkqstfpq sskdipdrga atdeklqnfa ientpvcfsr nsslsslsdi
     1981 dqennnnnke nepiketepp dsqgeaskpq asgyapksfh vedtpvcfsr nsslsslsid
     2041 seddllqeci ssampkkkkp srlkadnekh sprnmggila edltldlkdi qrpdsehgls
     2101 pdsenfdwka iqegansivs slhqaaaaac lsrqassdsd silslksgis lgspfhltpd
     2161 qeekpftsnk gprilkpgek stletkkles enkgikggkk vykslitgkv rsnseissqm
     2221 kqplqtnmpa isrgrtmihi pgvrnsssst spvskkgppl ktpaskspse gqaattsprg
     2281 tkpsvksels pvtrqasqta gsnkgpsrsg srdstpsrpa qqplsrpmqs pgrnsispgr
     2341 ngisppnkls qlprtsspst astkssgsgk msytspgrqm sqqnltkqtg lskngsgipr
     2401 sesaskglnq msnsngsnkk velsrmsstk ssgsesdrse rpvlvrqstf ikeapsptlr
     2461 rkleesasfe slspssrpds ptrsqahtpv lspslpdmsl sthssvqsgg wrklppnlsp
     2521 tieyndgrpv krhdiarshs espsrlpinr sgtwkrehsk hssslprvst wrrtgssssi
     2581 lsassessek aksedekhvn sisgskqtke nqvstkgtwr kikeseispt sstsqttssg
     2641 atngaesktl iyqmapavsk tedvwvried cpinnprsgr sptgntppvi dtvsekgnpn
     2701 pkdskdnqgk qnvsngsapt rtmglenrln sfiqvdppdq kgteakpgqs nnpvpasetn
     2761 essiaertpf sssssskhss psgtvaarvs pfnynpsprk ssadgtsarp sqiptpvstt
     2821 tkkrdskpds aepggtqspk rhsgsylvts v
//
LOCUS       XP_061014189            2843 aa            linear   MAM 02-DEC-2023
DEFINITION  adenomatous polyposis coli protein isoform X5 [Dama dama].
ACCESSION   XP_061014189
VERSION     XP_061014189.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158206.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2843
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2843
                     /product="adenomatous polyposis coli protein isoform X5"
                     /calculated_mol_wt=311266
     Region          101..181
                     /region_name="Suppressor_APC"
                     /note="Adenomatous polyposis coli tumour suppressor
                     protein; pfam11414"
                     /db_xref="CDD:463275"
     Region          314..366
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          367..440
                     /region_name="APC_rep"
                     /note="Adenomatous polyposis coli (APC) repeat; pfam18797"
                     /db_xref="CDD:465870"
     Region          464..500
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          504..545
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          508..545
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          555..587
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(578,582,586,625,629,633,670,674,678)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          595..636
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          641..681
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          645..679
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          683..723
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          687..723
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          724..1011
                     /region_name="Arm_APC_u3"
                     /note="Armadillo-associated region on APC; pfam16629"
                     /db_xref="CDD:435476"
     Region          1028..1127
                     /region_name="APC_u5"
                     /note="Unstructured region on APC between 1st and 2nd
                     catenin-bdg motifs; pfam16630"
                     /db_xref="CDD:406923"
     Region          <1176..1366
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          1277..1362
                     /region_name="APC_u9"
                     /note="Unstructured region on APC between 1st two
                     creatine-rich regions; pfam16633"
                     /db_xref="CDD:435478"
     Region          <1332..1699
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          1365..1387
                     /region_name="APC_r"
                     /note="APC repeat; pfam05923"
                     /db_xref="CDD:461781"
     Region          1634..1657
                     /region_name="APC_r"
                     /note="APC repeat; pfam05923"
                     /db_xref="CDD:461781"
     Region          1659..1712
                     /region_name="APC_u13"
                     /note="Unstructured region on APC between APC_crr and
                     SAMP; pfam16634"
                     /db_xref="CDD:406927"
     Region          1716..1734
                     /region_name="SAMP"
                     /note="SAMP Motif; pfam05924"
                     /db_xref="CDD:461782"
     Region          1743..1836
                     /region_name="APC_u14"
                     /note="Unstructured region on APC between SAMP and
                     APC_crr; pfam16635"
                     /db_xref="CDD:435479"
     Region          1870..1944
                     /region_name="APC_u15"
                     /note="Unstructured region on APC between APC_crr regions
                     5 and 6; pfam16636"
                     /db_xref="CDD:435480"
     Region          2032..2051
                     /region_name="SAMP"
                     /note="SAMP Motif; pfam05924"
                     /db_xref="CDD:461782"
     Region          2222..2567
                     /region_name="APC_basic"
                     /note="APC basic domain; pfam05956"
                     /db_xref="CDD:428690"
     Region          2669..2843
                     /region_name="EB1_binding"
                     /note="EB-1 Binding Domain; pfam05937"
                     /db_xref="CDD:399141"
     CDS             1..2843
                     /gene="APC"
                     /coded_by="XM_061158206.1:278..8809"
                     /db_xref="GeneID:133066790"
ORIGIN      
        1 meffrqedwi gchfllqnme vlkqlqgsie deamassgqi dllerlkeln ldssnfpgvk
       61 lrskmslrsy gsregsvssr sgecspvpmg sfprrgfvng srentgylee lekersllla
      121 dldkeekekd wyyaqlqnlt kridslplte nfslqtdmtr rqleyearqi rvameeqlgt
      181 cqdmekraqr ritriqqiek dilrirqllq sqateaerss qskheagshe aerqnegqgv
      241 aeinmatsgs gqgsttridh etasvlssss thsaprrlts hlgtkvemvy sllsmlgthd
      301 kddmsrtlla msssqdscis mrqsgclpll iqllhgndkd svllgnsrgs keararasaa
      361 lhniihsqpd dkrgrreirv lhlleqiray cetcwewqea heqgmdqdkn pmpapvehqi
      421 cpavcvlmkl sfdeehrham nelgrkatrg issqelgqgl sgglqaiael lqvdcemygl
      481 tndhysitlr ryagmaltnl tfgdvankat lcsmkgcmra lvaqlksdse dlqqviasvl
      541 rnlswradvn skktlrevgs vkalmecale vkkestlksv lsalwnlsah ctenkadica
      601 vggalaflvg tltyrsqtnt laiiesgggi lrnvssliat nedhrqilre nnclqtllqh
      661 lkshsltivs nacgtlwnls arnpkdqeal wdmgavsmlk nlihskhkmi amgsaaalrn
      721 lmanrpakyk danimspgss lpslhvrkqk aleaeldaqh lsetfdnidn lspkashrsk
      781 qrhkqnlygd ygfdsnrhdd nrsdnfntgn mtvlspylnt tvlpsssssr gsldssrsek
      841 drslerergi slgnyhpate npgtsskrgl qisttaaqia kvmeevsaih tsqedrssgs
      901 ttelhcgtde rnalrrssta hthantynft ksensnrtcp ipyakveykr ssndslnsvs
      961 ssdgygkrgq mkpsiesyse ddeskfcsyg qypadlahki hsanhmddnd geldtpinys
     1021 lkysdeqlns grqspsqner warpkhiled eikpneqrqs rsqstaypvy pestddkhlk
     1081 fqphfgqqec vspyrsraan gsepnrvgsn hgisqnvnqs lcqeddyedd kptnyserys
     1141 eegqheeeer ptnysikyse ekhhvdqpid yslkyttdip ssqkpafsfs knssgqstkt
     1201 ehissssent stpssnakrq nqlhpssaqs rssqtpkats ssckvpsinq etiqtycved
     1261 tpicfsrcss lsslssaede igcdqttqea dpanslqiae ikdnsgprpn edsvskvpav
     1321 sqhvrtkssr lqasglsses arhkavefss gakspsksga qtpksppehy vqetplmfsr
     1381 ctsvssldsf esrsiassvq sepcsgmvsg iispsdlpds pgqtmppsrs ktpppppppp
     1441 qtvqtkqevp knkapsaekr esgpkqaavn aavqrvqvlp dadtllhfat estpdgfscs
     1501 sslsalslde pfiqkdvelr imppvqendn gneteseqpe esnenqekea ekptdsekdi
     1561 ldesddddie ileeciisam ptkssrkakk paqttsklpp pvarkpsqlp vykllpsqnr
     1621 lqaqkhvsft pgddmprvyc vegtpinfst atslsdltie sppnelaage gvragaqsse
     1681 fekrdtipte grstdeaqrg kassvtvpel ddnkteegdi laecinsamp kgkshkpfrv
     1741 kkimdqvqqa smsssgtnkn qldgktkklt spvkpipqnt eyrtrvrknt dsknnlnaer
     1801 nfsenkdskk qhlknnskdf ndklpnnedr vrgsftfdsp hhytpiegtp ycfsrndsls
     1861 sldfddddvd lsrekaelrk gkenkeseat vtnhteltsn qqsanktpav tkqpinrgqs
     1921 ksvlqkqstf pqsskdipdr gaatdeklqn faientpvcf srnsslssls didqennnnn
     1981 kenepikete ppdsqgeask pqasgyapks fhvedtpvcf srnsslssls idseddllqe
     2041 cissampkkk kpsrlkadne khsprnmggi laedltldlk diqrpdsehg lspdsenfdw
     2101 kaiqegansi vsslhqaaaa aclsrqassd sdsilslksg islgspfhlt pdqeekpfts
     2161 nkgprilkpg ekstletkkl esenkgikgg kkvykslitg kvrsnseiss qmkqplqtnm
     2221 paisrgrtmi hipgvrnsss stspvskkgp plktpasksp segqaattsp rgtkpsvkse
     2281 lspvtrqasq tagsnkgpsr sgsrdstpsr paqqplsrpm qspgrnsisp grngisppnk
     2341 lsqlprtssp stastkssgs gkmsytspgr qmsqqnltkq tglskngsgi prsesaskgl
     2401 nqmsnsngsn kkvelsrmss tkssgsesdr serpvlvrqs tfikeapspt lrrkleesas
     2461 feslspssrp dsptrsqaht pvlspslpdm slsthssvqs ggwrklppnl sptieyndgr
     2521 pvkrhdiars hsespsrlpi nrsgtwkreh skhssslprv stwrrtgsss silsassess
     2581 ekaksedekh vnsisgskqt kenqvstkgt wrkikeseis ptsstsqtts sgatngaesk
     2641 tliyqmapav sktedvwvri edcpinnprs grsptgntpp vidtvsekgn pnpkdskdnq
     2701 gkqnvsngsa ptrtmglenr lnsfiqvdpp dqkgteakpg qsnnpvpase tnessiaert
     2761 pfsssssskh sspsgtvaar vspfnynpsp rkssadgtsa rpsqiptpvs tttkkrdskp
     2821 dsaepggtqs pkrhsgsylv tsv
//
LOCUS       XP_061014190            2810 aa            linear   MAM 02-DEC-2023
DEFINITION  adenomatous polyposis coli protein isoform X6 [Dama dama].
ACCESSION   XP_061014190
VERSION     XP_061014190.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158207.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2810
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2810
                     /product="adenomatous polyposis coli protein isoform X6"
                     /calculated_mol_wt=307299
     Region          68..148
                     /region_name="Suppressor_APC"
                     /note="Adenomatous polyposis coli tumour suppressor
                     protein; pfam11414"
                     /db_xref="CDD:463275"
     Region          281..333
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          334..407
                     /region_name="APC_rep"
                     /note="Adenomatous polyposis coli (APC) repeat; pfam18797"
                     /db_xref="CDD:465870"
     Region          431..467
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          471..512
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          475..512
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          522..554
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(545,549,553,592,596,600,637,641,645)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          562..603
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          608..648
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          612..646
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          650..690
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          654..690
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          691..978
                     /region_name="Arm_APC_u3"
                     /note="Armadillo-associated region on APC; pfam16629"
                     /db_xref="CDD:435476"
     Region          995..1094
                     /region_name="APC_u5"
                     /note="Unstructured region on APC between 1st and 2nd
                     catenin-bdg motifs; pfam16630"
                     /db_xref="CDD:406923"
     Region          <1143..1333
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          1244..1329
                     /region_name="APC_u9"
                     /note="Unstructured region on APC between 1st two
                     creatine-rich regions; pfam16633"
                     /db_xref="CDD:435478"
     Region          1332..1354
                     /region_name="APC_r"
                     /note="APC repeat; pfam05923"
                     /db_xref="CDD:461781"
     Region          1601..1624
                     /region_name="APC_r"
                     /note="APC repeat; pfam05923"
                     /db_xref="CDD:461781"
     Region          1626..1679
                     /region_name="APC_u13"
                     /note="Unstructured region on APC between APC_crr and
                     SAMP; pfam16634"
                     /db_xref="CDD:406927"
     Region          1683..1701
                     /region_name="SAMP"
                     /note="SAMP Motif; pfam05924"
                     /db_xref="CDD:461782"
     Region          1710..1803
                     /region_name="APC_u14"
                     /note="Unstructured region on APC between SAMP and
                     APC_crr; pfam16635"
                     /db_xref="CDD:435479"
     Region          1837..1911
                     /region_name="APC_u15"
                     /note="Unstructured region on APC between APC_crr regions
                     5 and 6; pfam16636"
                     /db_xref="CDD:435480"
     Region          1999..2018
                     /region_name="SAMP"
                     /note="SAMP Motif; pfam05924"
                     /db_xref="CDD:461782"
     Region          2189..2534
                     /region_name="APC_basic"
                     /note="APC basic domain; pfam05956"
                     /db_xref="CDD:428690"
     Region          2636..2810
                     /region_name="EB1_binding"
                     /note="EB-1 Binding Domain; pfam05937"
                     /db_xref="CDD:399141"
     CDS             1..2810
                     /gene="APC"
                     /coded_by="XM_061158207.1:65..8497"
                     /db_xref="GeneID:133066790"
ORIGIN      
        1 massgqidll erlkelnlds snfpgvklrs kmslrsygsr egsvssrsge cspvpmgsfp
       61 rrgfvngsre ntgyleelek ersllladld keekekdwyy aqlqnltkri dslpltenfs
      121 lqtdmtrrql eyearqirva meeqlgtcqd mekraqrrit riqqiekdil rirqllqsqa
      181 teaerssqsk heagsheaer qnegqgvaei nmatsgsgqg sttridheta svlssssths
      241 aprrltshlg tkvemvysll smlgthdkdd msrtllamss sqdscismrq sgclplliql
      301 lhgndkdsvl lgnsrgskea rarasaalhn iihsqpddkr grreirvlhl leqiraycet
      361 cwewqeaheq gmdqdknpmp apvehqicpa vcvlmklsfd eehrhamnel grkatrgiss
      421 qelgqglsgg lqaiaellqv dcemygltnd hysitlrrya gmaltnltfg dvankatlcs
      481 mkgcmralva qlksdsedlq qviasvlrnl swradvnskk tlrevgsvka lmecalevkk
      541 estlksvlsa lwnlsahcte nkadicavgg alaflvgtlt yrsqtntlai iesgggilrn
      601 vssliatned hrqilrennc lqtllqhlks hsltivsnac gtlwnlsarn pkdqealwdm
      661 gavsmlknli hskhkmiamg saaalrnlma nrpakykdan imspgsslps lhvrkqkale
      721 aeldaqhlse tfdnidnlsp kashrskqrh kqnlygdygf dsnrhddnrs dnfntgnmtv
      781 lspylnttvl psssssrgsl dssrsekdrs lerergislg nyhpatenpg tsskrglqis
      841 ttaaqiakvm eevsaihtsq edrssgstte lhcgtderna lrrsstahth antynftkse
      901 nsnrtcpipy akveykrssn dslnsvsssd gygkrgqmkp siesysedde skfcsygqyp
      961 adlahkihsa nhmddndgel dtpinyslky sdeqlnsgrq spsqnerwar pkhiledeik
     1021 pneqrqsrsq staypvypes tddkhlkfqp hfgqqecvsp yrsraangse pnrvgsnhgi
     1081 sqnvnqslcq eddyeddkpt nyseryseeg qheeeerptn ysikyseekh hvdqpidysl
     1141 kyttdipssq kpafsfskns sgqstktehi ssssentstp ssnakrqnql hpssaqsrss
     1201 qtpkatsssc kvpsinqeti qtycvedtpi cfsrcsslss lssaedeigc dqttqeadpa
     1261 nslqiaeikd nsgprpneds vskvpavsqh vrtkssrlqa sglssesarh kavefssgak
     1321 spsksgaqtp ksppehyvqe tplmfsrcts vssldsfesr siassvqsep csgmvsgiis
     1381 psdlpdspgq tmppsrsktp pppppppqtv qtkqevpknk apsaekresg pkqaavnaav
     1441 qrvqvlpdad tllhfatest pdgfscsssl salsldepfi qkdvelrimp pvqendngne
     1501 teseqpeesn enqekeaekp tdsekdilde sddddieile eciisamptk ssrkakkpaq
     1561 ttsklpppva rkpsqlpvyk llpsqnrlqa qkhvsftpgd dmprvycveg tpinfstats
     1621 lsdltiespp nelaagegvr agaqssefek rdtiptegrs tdeaqrgkas svtvpelddn
     1681 kteegdilae cinsampkgk shkpfrvkki mdqvqqasms ssgtnknqld gktkkltspv
     1741 kpipqnteyr trvrkntdsk nnlnaernfs enkdskkqhl knnskdfndk lpnnedrvrg
     1801 sftfdsphhy tpiegtpycf srndslssld fddddvdlsr ekaelrkgke nkeseatvtn
     1861 hteltsnqqs anktpavtkq pinrgqsksv lqkqstfpqs skdipdrgaa tdeklqnfai
     1921 entpvcfsrn sslsslsdid qennnnnken epiketeppd sqgeaskpqa sgyapksfhv
     1981 edtpvcfsrn sslsslsids eddllqecis sampkkkkps rlkadnekhs prnmggilae
     2041 dltldlkdiq rpdsehglsp dsenfdwkai qegansivss lhqaaaaacl srqassdsds
     2101 ilslksgisl gspfhltpdq eekpftsnkg prilkpgeks tletkklese nkgikggkkv
     2161 ykslitgkvr snseissqmk qplqtnmpai srgrtmihip gvrnssssts pvskkgpplk
     2221 tpaskspseg qaattsprgt kpsvkselsp vtrqasqtag snkgpsrsgs rdstpsrpaq
     2281 qplsrpmqsp grnsispgrn gisppnklsq lprtsspsta stkssgsgkm sytspgrqms
     2341 qqnltkqtgl skngsgiprs esaskglnqm snsngsnkkv elsrmsstks sgsesdrser
     2401 pvlvrqstfi keapsptlrr kleesasfes lspssrpdsp trsqahtpvl spslpdmsls
     2461 thssvqsggw rklppnlspt ieyndgrpvk rhdiarshse spsrlpinrs gtwkrehskh
     2521 ssslprvstw rrtgssssil sassesseka ksedekhvns isgskqtken qvstkgtwrk
     2581 ikeseispts stsqttssga tngaesktli yqmapavskt edvwvriedc pinnprsgrs
     2641 ptgntppvid tvsekgnpnp kdskdnqgkq nvsngsaptr tmglenrlns fiqvdppdqk
     2701 gteakpgqsn npvpasetne ssiaertpfs ssssskhssp sgtvaarvsp fnynpsprks
     2761 sadgtsarps qiptpvsttt kkrdskpdsa epggtqspkr hsgsylvtsv
//
LOCUS       XP_061014191            2778 aa            linear   MAM 02-DEC-2023
DEFINITION  adenomatous polyposis coli protein isoform X7 [Dama dama].
ACCESSION   XP_061014191
VERSION     XP_061014191.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158208.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2778
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2778
                     /product="adenomatous polyposis coli protein isoform X7"
                     /calculated_mol_wt=303249
     Region          137..217
                     /region_name="Suppressor_APC"
                     /note="Adenomatous polyposis coli tumour suppressor
                     protein; pfam11414"
                     /db_xref="CDD:463275"
     Region          <317..375
                     /region_name="APC_rep"
                     /note="Adenomatous polyposis coli (APC) repeat; pfam18797"
                     /db_xref="CDD:465870"
     Region          399..435
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          439..480
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          443..480
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          490..522
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(513,517,521,560,564,568,605,609,613)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          530..571
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          576..616
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          580..614
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          618..658
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          622..658
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          659..946
                     /region_name="Arm_APC_u3"
                     /note="Armadillo-associated region on APC; pfam16629"
                     /db_xref="CDD:435476"
     Region          963..1062
                     /region_name="APC_u5"
                     /note="Unstructured region on APC between 1st and 2nd
                     catenin-bdg motifs; pfam16630"
                     /db_xref="CDD:406923"
     Region          <1111..1301
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          1212..1297
                     /region_name="APC_u9"
                     /note="Unstructured region on APC between 1st two
                     creatine-rich regions; pfam16633"
                     /db_xref="CDD:435478"
     Region          1300..1322
                     /region_name="APC_r"
                     /note="APC repeat; pfam05923"
                     /db_xref="CDD:461781"
     Region          1569..1592
                     /region_name="APC_r"
                     /note="APC repeat; pfam05923"
                     /db_xref="CDD:461781"
     Region          1594..1647
                     /region_name="APC_u13"
                     /note="Unstructured region on APC between APC_crr and
                     SAMP; pfam16634"
                     /db_xref="CDD:406927"
     Region          1651..1669
                     /region_name="SAMP"
                     /note="SAMP Motif; pfam05924"
                     /db_xref="CDD:461782"
     Region          1678..1771
                     /region_name="APC_u14"
                     /note="Unstructured region on APC between SAMP and
                     APC_crr; pfam16635"
                     /db_xref="CDD:435479"
     Region          1805..1879
                     /region_name="APC_u15"
                     /note="Unstructured region on APC between APC_crr regions
                     5 and 6; pfam16636"
                     /db_xref="CDD:435480"
     Region          1967..1986
                     /region_name="SAMP"
                     /note="SAMP Motif; pfam05924"
                     /db_xref="CDD:461782"
     Region          2157..2502
                     /region_name="APC_basic"
                     /note="APC basic domain; pfam05956"
                     /db_xref="CDD:428690"
     Region          2604..2778
                     /region_name="EB1_binding"
                     /note="EB-1 Binding Domain; pfam05937"
                     /db_xref="CDD:399141"
     CDS             1..2778
                     /gene="APC"
                     /coded_by="XM_061158208.1:126..8462"
                     /db_xref="GeneID:133066790"
ORIGIN      
        1 mytpvcssav aalptsvppc avgsrssggg rgcvrqerkr pgcvrasvrg asvwqevlkq
       61 lqgsiedeam assgqidlle rlkelnldss nfpgvklrsk mslrsygsre gsvssrsgec
      121 spvpmgsfpr rgfvngsren tgyleeleke rsllladldk eekekdwyya qlqnltkrid
      181 slpltenfsl qtdmtrrqle yearqirvam eeqlgtcqdm ekraqrritr iqqiekdilr
      241 irqllqsqat eaerssqskh eagsheaerq negqgvaein matsgsgqgs ttridhetas
      301 vlssssthsa prrltshlgt kiraycetcw ewqeaheqgm dqdknpmpap vehqicpavc
      361 vlmklsfdee hrhamnelgr katrgissqe lgqglsgglq aiaellqvdc emygltndhy
      421 sitlrryagm altnltfgdv ankatlcsmk gcmralvaql ksdsedlqqv iasvlrnlsw
      481 radvnskktl revgsvkalm ecalevkkes tlksvlsalw nlsahctenk adicavggal
      541 aflvgtltyr sqtntlaiie sgggilrnvs sliatnedhr qilrennclq tllqhlkshs
      601 ltivsnacgt lwnlsarnpk dqealwdmga vsmlknlihs khkmiamgsa aalrnlmanr
      661 pakykdanim spgsslpslh vrkqkaleae ldaqhlsetf dnidnlspka shrskqrhkq
      721 nlygdygfds nrhddnrsdn fntgnmtvls pylnttvlps ssssrgslds srsekdrsle
      781 rergislgny hpatenpgts skrglqistt aaqiakvmee vsaihtsqed rssgsttelh
      841 cgtdernalr rsstahthan tynftksens nrtcpipyak veykrssnds lnsvsssdgy
      901 gkrgqmkpsi esyseddesk fcsygqypad lahkihsanh mddndgeldt pinyslkysd
      961 eqlnsgrqsp sqnerwarpk hiledeikpn eqrqsrsqst aypvypestd dkhlkfqphf
     1021 gqqecvspyr sraangsepn rvgsnhgisq nvnqslcqed dyeddkptny seryseegqh
     1081 eeeerptnys ikyseekhhv dqpidyslky ttdipssqkp afsfsknssg qstktehiss
     1141 ssentstpss nakrqnqlhp ssaqsrssqt pkatsssckv psinqetiqt ycvedtpicf
     1201 srcsslssls saedeigcdq ttqeadpans lqiaeikdns gprpnedsvs kvpavsqhvr
     1261 tkssrlqasg lssesarhka vefssgaksp sksgaqtpks ppehyvqetp lmfsrctsvs
     1321 sldsfesrsi assvqsepcs gmvsgiisps dlpdspgqtm ppsrsktppp pppppqtvqt
     1381 kqevpknkap saekresgpk qaavnaavqr vqvlpdadtl lhfatestpd gfscssslsa
     1441 lsldepfiqk dvelrimppv qendngnete seqpeesnen qekeaekptd sekdildesd
     1501 dddieileec iisamptkss rkakkpaqtt sklpppvark psqlpvykll psqnrlqaqk
     1561 hvsftpgddm prvycvegtp infstatsls dltiesppne laagegvrag aqssefekrd
     1621 tiptegrstd eaqrgkassv tvpelddnkt eegdilaeci nsampkgksh kpfrvkkimd
     1681 qvqqasmsss gtnknqldgk tkkltspvkp ipqnteyrtr vrkntdsknn lnaernfsen
     1741 kdskkqhlkn nskdfndklp nnedrvrgsf tfdsphhytp iegtpycfsr ndslssldfd
     1801 dddvdlsrek aelrkgkenk eseatvtnht eltsnqqsan ktpavtkqpi nrgqsksvlq
     1861 kqstfpqssk dipdrgaatd eklqnfaien tpvcfsrnss lsslsdidqe nnnnnkenep
     1921 iketeppdsq geaskpqasg yapksfhved tpvcfsrnss lsslsidsed dllqecissa
     1981 mpkkkkpsrl kadnekhspr nmggilaedl tldlkdiqrp dsehglspds enfdwkaiqe
     2041 gansivsslh qaaaaaclsr qassdsdsil slksgislgs pfhltpdqee kpftsnkgpr
     2101 ilkpgekstl etkklesenk gikggkkvyk slitgkvrsn seissqmkqp lqtnmpaisr
     2161 grtmihipgv rnsssstspv skkgpplktp askspsegqa attsprgtkp svkselspvt
     2221 rqasqtagsn kgpsrsgsrd stpsrpaqqp lsrpmqspgr nsispgrngi sppnklsqlp
     2281 rtsspstast kssgsgkmsy tspgrqmsqq nltkqtglsk ngsgiprses askglnqmsn
     2341 sngsnkkvel srmsstkssg sesdrserpv lvrqstfike apsptlrrkl eesasfesls
     2401 pssrpdsptr sqahtpvlsp slpdmslsth ssvqsggwrk lppnlsptie yndgrpvkrh
     2461 diarshsesp srlpinrsgt wkrehskhss slprvstwrr tgssssilsa ssessekaks
     2521 edekhvnsis gskqtkenqv stkgtwrkik eseisptsst sqttssgatn gaesktliyq
     2581 mapavskted vwvriedcpi nnprsgrspt gntppvidtv sekgnpnpkd skdnqgkqnv
     2641 sngsaptrtm glenrlnsfi qvdppdqkgt eakpgqsnnp vpasetness iaertpfsss
     2701 ssskhsspsg tvaarvspfn ynpsprkssa dgtsarpsqi ptpvstttkk rdskpdsaep
     2761 ggtqspkrhs gsylvtsv
//
LOCUS       XP_061014192            2768 aa            linear   MAM 02-DEC-2023
DEFINITION  adenomatous polyposis coli protein isoform X8 [Dama dama].
ACCESSION   XP_061014192
VERSION     XP_061014192.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158209.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2768
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2768
                     /product="adenomatous polyposis coli protein isoform X8"
                     /calculated_mol_wt=302753
     Region          4..55
                     /region_name="APC_N_CC"
                     /note="Coiled-coil N-terminus of APC, dimerization domain;
                     pfam16689"
                     /db_xref="CDD:435517"
     Region          <8..268
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          127..207
                     /region_name="Suppressor_APC"
                     /note="Adenomatous polyposis coli tumour suppressor
                     protein; pfam11414"
                     /db_xref="CDD:463275"
     Region          <307..365
                     /region_name="APC_rep"
                     /note="Adenomatous polyposis coli (APC) repeat; pfam18797"
                     /db_xref="CDD:465870"
     Region          389..425
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          429..470
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          433..470
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          480..512
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(503,507,511,550,554,558,595,599,603)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          520..561
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          566..606
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          570..604
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          608..648
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          612..648
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          649..936
                     /region_name="Arm_APC_u3"
                     /note="Armadillo-associated region on APC; pfam16629"
                     /db_xref="CDD:435476"
     Region          953..1052
                     /region_name="APC_u5"
                     /note="Unstructured region on APC between 1st and 2nd
                     catenin-bdg motifs; pfam16630"
                     /db_xref="CDD:406923"
     Region          <1101..1291
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          1202..1287
                     /region_name="APC_u9"
                     /note="Unstructured region on APC between 1st two
                     creatine-rich regions; pfam16633"
                     /db_xref="CDD:435478"
     Region          1290..1312
                     /region_name="APC_r"
                     /note="APC repeat; pfam05923"
                     /db_xref="CDD:461781"
     Region          1559..1582
                     /region_name="APC_r"
                     /note="APC repeat; pfam05923"
                     /db_xref="CDD:461781"
     Region          1584..1637
                     /region_name="APC_u13"
                     /note="Unstructured region on APC between APC_crr and
                     SAMP; pfam16634"
                     /db_xref="CDD:406927"
     Region          1641..1659
                     /region_name="SAMP"
                     /note="SAMP Motif; pfam05924"
                     /db_xref="CDD:461782"
     Region          1668..1761
                     /region_name="APC_u14"
                     /note="Unstructured region on APC between SAMP and
                     APC_crr; pfam16635"
                     /db_xref="CDD:435479"
     Region          1795..1869
                     /region_name="APC_u15"
                     /note="Unstructured region on APC between APC_crr regions
                     5 and 6; pfam16636"
                     /db_xref="CDD:435480"
     Region          1957..1976
                     /region_name="SAMP"
                     /note="SAMP Motif; pfam05924"
                     /db_xref="CDD:461782"
     Region          2147..2492
                     /region_name="APC_basic"
                     /note="APC basic domain; pfam05956"
                     /db_xref="CDD:428690"
     Region          2594..2768
                     /region_name="EB1_binding"
                     /note="EB-1 Binding Domain; pfam05937"
                     /db_xref="CDD:399141"
     CDS             1..2768
                     /gene="APC"
                     /coded_by="XM_061158209.1:176..8482"
                     /db_xref="GeneID:133066790"
ORIGIN      
        1 maaasydqll kqvealkmen snlrqeledn snhltklete asnmkevlkq lqgsiedeam
       61 assgqidlle rlkelnldss nfpgvklrsk mslrsygsre gsvssrsgec spvpmgsfpr
      121 rgfvngsren tgyleeleke rsllladldk eekekdwyya qlqnltkrid slpltenfsl
      181 qtdmtrrqle yearqirvam eeqlgtcqdm ekraqrritr iqqiekdilr irqllqsqat
      241 eaerssqskh eagsheaerq negqgvaein matsgsgqgs ttridhetas vlssssthsa
      301 prrltshlgt kiraycetcw ewqeaheqgm dqdknpmpap vehqicpavc vlmklsfdee
      361 hrhamnelgr katrgissqe lgqglsgglq aiaellqvdc emygltndhy sitlrryagm
      421 altnltfgdv ankatlcsmk gcmralvaql ksdsedlqqv iasvlrnlsw radvnskktl
      481 revgsvkalm ecalevkkes tlksvlsalw nlsahctenk adicavggal aflvgtltyr
      541 sqtntlaiie sgggilrnvs sliatnedhr qilrennclq tllqhlkshs ltivsnacgt
      601 lwnlsarnpk dqealwdmga vsmlknlihs khkmiamgsa aalrnlmanr pakykdanim
      661 spgsslpslh vrkqkaleae ldaqhlsetf dnidnlspka shrskqrhkq nlygdygfds
      721 nrhddnrsdn fntgnmtvls pylnttvlps ssssrgslds srsekdrsle rergislgny
      781 hpatenpgts skrglqistt aaqiakvmee vsaihtsqed rssgsttelh cgtdernalr
      841 rsstahthan tynftksens nrtcpipyak veykrssnds lnsvsssdgy gkrgqmkpsi
      901 esyseddesk fcsygqypad lahkihsanh mddndgeldt pinyslkysd eqlnsgrqsp
      961 sqnerwarpk hiledeikpn eqrqsrsqst aypvypestd dkhlkfqphf gqqecvspyr
     1021 sraangsepn rvgsnhgisq nvnqslcqed dyeddkptny seryseegqh eeeerptnys
     1081 ikyseekhhv dqpidyslky ttdipssqkp afsfsknssg qstktehiss ssentstpss
     1141 nakrqnqlhp ssaqsrssqt pkatsssckv psinqetiqt ycvedtpicf srcsslssls
     1201 saedeigcdq ttqeadpans lqiaeikdns gprpnedsvs kvpavsqhvr tkssrlqasg
     1261 lssesarhka vefssgaksp sksgaqtpks ppehyvqetp lmfsrctsvs sldsfesrsi
     1321 assvqsepcs gmvsgiisps dlpdspgqtm ppsrsktppp pppppqtvqt kqevpknkap
     1381 saekresgpk qaavnaavqr vqvlpdadtl lhfatestpd gfscssslsa lsldepfiqk
     1441 dvelrimppv qendngnete seqpeesnen qekeaekptd sekdildesd dddieileec
     1501 iisamptkss rkakkpaqtt sklpppvark psqlpvykll psqnrlqaqk hvsftpgddm
     1561 prvycvegtp infstatsls dltiesppne laagegvrag aqssefekrd tiptegrstd
     1621 eaqrgkassv tvpelddnkt eegdilaeci nsampkgksh kpfrvkkimd qvqqasmsss
     1681 gtnknqldgk tkkltspvkp ipqnteyrtr vrkntdsknn lnaernfsen kdskkqhlkn
     1741 nskdfndklp nnedrvrgsf tfdsphhytp iegtpycfsr ndslssldfd dddvdlsrek
     1801 aelrkgkenk eseatvtnht eltsnqqsan ktpavtkqpi nrgqsksvlq kqstfpqssk
     1861 dipdrgaatd eklqnfaien tpvcfsrnss lsslsdidqe nnnnnkenep iketeppdsq
     1921 geaskpqasg yapksfhved tpvcfsrnss lsslsidsed dllqecissa mpkkkkpsrl
     1981 kadnekhspr nmggilaedl tldlkdiqrp dsehglspds enfdwkaiqe gansivsslh
     2041 qaaaaaclsr qassdsdsil slksgislgs pfhltpdqee kpftsnkgpr ilkpgekstl
     2101 etkklesenk gikggkkvyk slitgkvrsn seissqmkqp lqtnmpaisr grtmihipgv
     2161 rnsssstspv skkgpplktp askspsegqa attsprgtkp svkselspvt rqasqtagsn
     2221 kgpsrsgsrd stpsrpaqqp lsrpmqspgr nsispgrngi sppnklsqlp rtsspstast
     2281 kssgsgkmsy tspgrqmsqq nltkqtglsk ngsgiprses askglnqmsn sngsnkkvel
     2341 srmsstkssg sesdrserpv lvrqstfike apsptlrrkl eesasfesls pssrpdsptr
     2401 sqahtpvlsp slpdmslsth ssvqsggwrk lppnlsptie yndgrpvkrh diarshsesp
     2461 srlpinrsgt wkrehskhss slprvstwrr tgssssilsa ssessekaks edekhvnsis
     2521 gskqtkenqv stkgtwrkik eseisptsst sqttssgatn gaesktliyq mapavskted
     2581 vwvriedcpi nnprsgrspt gntppvidtv sekgnpnpkd skdnqgkqnv sngsaptrtm
     2641 glenrlnsfi qvdppdqkgt eakpgqsnnp vpasetness iaertpfsss ssskhsspsg
     2701 tvaarvspfn ynpsprkssa dgtsarpsqi ptpvstttkk rdskpdsaep ggtqspkrhs
     2761 gsylvtsv
//
LOCUS       XP_061014193            2760 aa            linear   MAM 02-DEC-2023
DEFINITION  adenomatous polyposis coli protein isoform X9 [Dama dama].
ACCESSION   XP_061014193
VERSION     XP_061014193.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158210.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2760
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2760
                     /product="adenomatous polyposis coli protein isoform X9"
                     /calculated_mol_wt=301422
     Region          137..217
                     /region_name="Suppressor_APC"
                     /note="Adenomatous polyposis coli tumour suppressor
                     protein; pfam11414"
                     /db_xref="CDD:463275"
     Region          <317..375
                     /region_name="APC_rep"
                     /note="Adenomatous polyposis coli (APC) repeat; pfam18797"
                     /db_xref="CDD:465870"
     Region          374..417
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          421..462
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          425..462
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          472..504
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(495,499,503,542,546,550,587,591,595)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          512..553
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          558..598
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          562..596
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          600..640
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          604..640
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          641..928
                     /region_name="Arm_APC_u3"
                     /note="Armadillo-associated region on APC; pfam16629"
                     /db_xref="CDD:435476"
     Region          945..1044
                     /region_name="APC_u5"
                     /note="Unstructured region on APC between 1st and 2nd
                     catenin-bdg motifs; pfam16630"
                     /db_xref="CDD:406923"
     Region          <1093..1283
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          1194..1279
                     /region_name="APC_u9"
                     /note="Unstructured region on APC between 1st two
                     creatine-rich regions; pfam16633"
                     /db_xref="CDD:435478"
     Region          1282..1304
                     /region_name="APC_r"
                     /note="APC repeat; pfam05923"
                     /db_xref="CDD:461781"
     Region          1551..1574
                     /region_name="APC_r"
                     /note="APC repeat; pfam05923"
                     /db_xref="CDD:461781"
     Region          1576..1629
                     /region_name="APC_u13"
                     /note="Unstructured region on APC between APC_crr and
                     SAMP; pfam16634"
                     /db_xref="CDD:406927"
     Region          1633..1651
                     /region_name="SAMP"
                     /note="SAMP Motif; pfam05924"
                     /db_xref="CDD:461782"
     Region          1660..1753
                     /region_name="APC_u14"
                     /note="Unstructured region on APC between SAMP and
                     APC_crr; pfam16635"
                     /db_xref="CDD:435479"
     Region          1787..1861
                     /region_name="APC_u15"
                     /note="Unstructured region on APC between APC_crr regions
                     5 and 6; pfam16636"
                     /db_xref="CDD:435480"
     Region          1949..1968
                     /region_name="SAMP"
                     /note="SAMP Motif; pfam05924"
                     /db_xref="CDD:461782"
     Region          2139..2484
                     /region_name="APC_basic"
                     /note="APC basic domain; pfam05956"
                     /db_xref="CDD:428690"
     Region          2586..2760
                     /region_name="EB1_binding"
                     /note="EB-1 Binding Domain; pfam05937"
                     /db_xref="CDD:399141"
     CDS             1..2760
                     /gene="APC"
                     /coded_by="XM_061158210.1:126..8408"
                     /db_xref="GeneID:133066790"
ORIGIN      
        1 mytpvcssav aalptsvppc avgsrssggg rgcvrqerkr pgcvrasvrg asvwqevlkq
       61 lqgsiedeam assgqidlle rlkelnldss nfpgvklrsk mslrsygsre gsvssrsgec
      121 spvpmgsfpr rgfvngsren tgyleeleke rsllladldk eekekdwyya qlqnltkrid
      181 slpltenfsl qtdmtrrqle yearqirvam eeqlgtcqdm ekraqrritr iqqiekdilr
      241 irqllqsqat eaerssqskh eagsheaerq negqgvaein matsgsgqgs ttridhetas
      301 vlssssthsa prrltshlgt kiraycetcw ewqeaheqgm dqdknpmpap vehqicpavc
      361 vlmklsfdee hrhamnelgg lqaiaellqv dcemygltnd hysitlrrya gmaltnltfg
      421 dvankatlcs mkgcmralva qlksdsedlq qviasvlrnl swradvnskk tlrevgsvka
      481 lmecalevkk estlksvlsa lwnlsahcte nkadicavgg alaflvgtlt yrsqtntlai
      541 iesgggilrn vssliatned hrqilrennc lqtllqhlks hsltivsnac gtlwnlsarn
      601 pkdqealwdm gavsmlknli hskhkmiamg saaalrnlma nrpakykdan imspgsslps
      661 lhvrkqkale aeldaqhlse tfdnidnlsp kashrskqrh kqnlygdygf dsnrhddnrs
      721 dnfntgnmtv lspylnttvl psssssrgsl dssrsekdrs lerergislg nyhpatenpg
      781 tsskrglqis ttaaqiakvm eevsaihtsq edrssgstte lhcgtderna lrrsstahth
      841 antynftkse nsnrtcpipy akveykrssn dslnsvsssd gygkrgqmkp siesysedde
      901 skfcsygqyp adlahkihsa nhmddndgel dtpinyslky sdeqlnsgrq spsqnerwar
      961 pkhiledeik pneqrqsrsq staypvypes tddkhlkfqp hfgqqecvsp yrsraangse
     1021 pnrvgsnhgi sqnvnqslcq eddyeddkpt nyseryseeg qheeeerptn ysikyseekh
     1081 hvdqpidysl kyttdipssq kpafsfskns sgqstktehi ssssentstp ssnakrqnql
     1141 hpssaqsrss qtpkatsssc kvpsinqeti qtycvedtpi cfsrcsslss lssaedeigc
     1201 dqttqeadpa nslqiaeikd nsgprpneds vskvpavsqh vrtkssrlqa sglssesarh
     1261 kavefssgak spsksgaqtp ksppehyvqe tplmfsrcts vssldsfesr siassvqsep
     1321 csgmvsgiis psdlpdspgq tmppsrsktp pppppppqtv qtkqevpknk apsaekresg
     1381 pkqaavnaav qrvqvlpdad tllhfatest pdgfscsssl salsldepfi qkdvelrimp
     1441 pvqendngne teseqpeesn enqekeaekp tdsekdilde sddddieile eciisamptk
     1501 ssrkakkpaq ttsklpppva rkpsqlpvyk llpsqnrlqa qkhvsftpgd dmprvycveg
     1561 tpinfstats lsdltiespp nelaagegvr agaqssefek rdtiptegrs tdeaqrgkas
     1621 svtvpelddn kteegdilae cinsampkgk shkpfrvkki mdqvqqasms ssgtnknqld
     1681 gktkkltspv kpipqnteyr trvrkntdsk nnlnaernfs enkdskkqhl knnskdfndk
     1741 lpnnedrvrg sftfdsphhy tpiegtpycf srndslssld fddddvdlsr ekaelrkgke
     1801 nkeseatvtn hteltsnqqs anktpavtkq pinrgqsksv lqkqstfpqs skdipdrgaa
     1861 tdeklqnfai entpvcfsrn sslsslsdid qennnnnken epiketeppd sqgeaskpqa
     1921 sgyapksfhv edtpvcfsrn sslsslsids eddllqecis sampkkkkps rlkadnekhs
     1981 prnmggilae dltldlkdiq rpdsehglsp dsenfdwkai qegansivss lhqaaaaacl
     2041 srqassdsds ilslksgisl gspfhltpdq eekpftsnkg prilkpgeks tletkklese
     2101 nkgikggkkv ykslitgkvr snseissqmk qplqtnmpai srgrtmihip gvrnssssts
     2161 pvskkgpplk tpaskspseg qaattsprgt kpsvkselsp vtrqasqtag snkgpsrsgs
     2221 rdstpsrpaq qplsrpmqsp grnsispgrn gisppnklsq lprtsspsta stkssgsgkm
     2281 sytspgrqms qqnltkqtgl skngsgiprs esaskglnqm snsngsnkkv elsrmsstks
     2341 sgsesdrser pvlvrqstfi keapsptlrr kleesasfes lspssrpdsp trsqahtpvl
     2401 spslpdmsls thssvqsggw rklppnlspt ieyndgrpvk rhdiarshse spsrlpinrs
     2461 gtwkrehskh ssslprvstw rrtgssssil sassesseka ksedekhvns isgskqtken
     2521 qvstkgtwrk ikeseispts stsqttssga tngaesktli yqmapavskt edvwvriedc
     2581 pinnprsgrs ptgntppvid tvsekgnpnp kdskdnqgkq nvsngsaptr tmglenrlns
     2641 fiqvdppdqk gteakpgqsn npvpasetne ssiaertpfs ssssskhssp sgtvaarvsp
     2701 fnynpsprks sadgtsarps qiptpvsttt kkrdskpdsa epggtqspkr hsgsylvtsv
//
LOCUS       XP_061014194            2750 aa            linear   MAM 02-DEC-2023
DEFINITION  adenomatous polyposis coli protein isoform X10 [Dama dama].
ACCESSION   XP_061014194
VERSION     XP_061014194.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158211.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2750
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2750
                     /product="adenomatous polyposis coli protein isoform X10"
                     /calculated_mol_wt=300925
     Region          4..55
                     /region_name="APC_N_CC"
                     /note="Coiled-coil N-terminus of APC, dimerization domain;
                     pfam16689"
                     /db_xref="CDD:435517"
     Region          <8..268
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          127..207
                     /region_name="Suppressor_APC"
                     /note="Adenomatous polyposis coli tumour suppressor
                     protein; pfam11414"
                     /db_xref="CDD:463275"
     Region          <307..365
                     /region_name="APC_rep"
                     /note="Adenomatous polyposis coli (APC) repeat; pfam18797"
                     /db_xref="CDD:465870"
     Region          364..407
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          411..452
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          415..452
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          462..494
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(485,489,493,532,536,540,577,581,585)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          502..543
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          548..588
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          552..586
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          590..630
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          594..630
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          631..918
                     /region_name="Arm_APC_u3"
                     /note="Armadillo-associated region on APC; pfam16629"
                     /db_xref="CDD:435476"
     Region          935..1034
                     /region_name="APC_u5"
                     /note="Unstructured region on APC between 1st and 2nd
                     catenin-bdg motifs; pfam16630"
                     /db_xref="CDD:406923"
     Region          <1083..1273
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          1184..1269
                     /region_name="APC_u9"
                     /note="Unstructured region on APC between 1st two
                     creatine-rich regions; pfam16633"
                     /db_xref="CDD:435478"
     Region          1272..1294
                     /region_name="APC_r"
                     /note="APC repeat; pfam05923"
                     /db_xref="CDD:461781"
     Region          1541..1564
                     /region_name="APC_r"
                     /note="APC repeat; pfam05923"
                     /db_xref="CDD:461781"
     Region          1566..1619
                     /region_name="APC_u13"
                     /note="Unstructured region on APC between APC_crr and
                     SAMP; pfam16634"
                     /db_xref="CDD:406927"
     Region          1623..1641
                     /region_name="SAMP"
                     /note="SAMP Motif; pfam05924"
                     /db_xref="CDD:461782"
     Region          1650..1743
                     /region_name="APC_u14"
                     /note="Unstructured region on APC between SAMP and
                     APC_crr; pfam16635"
                     /db_xref="CDD:435479"
     Region          1777..1851
                     /region_name="APC_u15"
                     /note="Unstructured region on APC between APC_crr regions
                     5 and 6; pfam16636"
                     /db_xref="CDD:435480"
     Region          1939..1958
                     /region_name="SAMP"
                     /note="SAMP Motif; pfam05924"
                     /db_xref="CDD:461782"
     Region          2129..2474
                     /region_name="APC_basic"
                     /note="APC basic domain; pfam05956"
                     /db_xref="CDD:428690"
     Region          2576..2750
                     /region_name="EB1_binding"
                     /note="EB-1 Binding Domain; pfam05937"
                     /db_xref="CDD:399141"
     CDS             1..2750
                     /gene="APC"
                     /coded_by="XM_061158211.1:176..8428"
                     /db_xref="GeneID:133066790"
ORIGIN      
        1 maaasydqll kqvealkmen snlrqeledn snhltklete asnmkevlkq lqgsiedeam
       61 assgqidlle rlkelnldss nfpgvklrsk mslrsygsre gsvssrsgec spvpmgsfpr
      121 rgfvngsren tgyleeleke rsllladldk eekekdwyya qlqnltkrid slpltenfsl
      181 qtdmtrrqle yearqirvam eeqlgtcqdm ekraqrritr iqqiekdilr irqllqsqat
      241 eaerssqskh eagsheaerq negqgvaein matsgsgqgs ttridhetas vlssssthsa
      301 prrltshlgt kiraycetcw ewqeaheqgm dqdknpmpap vehqicpavc vlmklsfdee
      361 hrhamnelgg lqaiaellqv dcemygltnd hysitlrrya gmaltnltfg dvankatlcs
      421 mkgcmralva qlksdsedlq qviasvlrnl swradvnskk tlrevgsvka lmecalevkk
      481 estlksvlsa lwnlsahcte nkadicavgg alaflvgtlt yrsqtntlai iesgggilrn
      541 vssliatned hrqilrennc lqtllqhlks hsltivsnac gtlwnlsarn pkdqealwdm
      601 gavsmlknli hskhkmiamg saaalrnlma nrpakykdan imspgsslps lhvrkqkale
      661 aeldaqhlse tfdnidnlsp kashrskqrh kqnlygdygf dsnrhddnrs dnfntgnmtv
      721 lspylnttvl psssssrgsl dssrsekdrs lerergislg nyhpatenpg tsskrglqis
      781 ttaaqiakvm eevsaihtsq edrssgstte lhcgtderna lrrsstahth antynftkse
      841 nsnrtcpipy akveykrssn dslnsvsssd gygkrgqmkp siesysedde skfcsygqyp
      901 adlahkihsa nhmddndgel dtpinyslky sdeqlnsgrq spsqnerwar pkhiledeik
      961 pneqrqsrsq staypvypes tddkhlkfqp hfgqqecvsp yrsraangse pnrvgsnhgi
     1021 sqnvnqslcq eddyeddkpt nyseryseeg qheeeerptn ysikyseekh hvdqpidysl
     1081 kyttdipssq kpafsfskns sgqstktehi ssssentstp ssnakrqnql hpssaqsrss
     1141 qtpkatsssc kvpsinqeti qtycvedtpi cfsrcsslss lssaedeigc dqttqeadpa
     1201 nslqiaeikd nsgprpneds vskvpavsqh vrtkssrlqa sglssesarh kavefssgak
     1261 spsksgaqtp ksppehyvqe tplmfsrcts vssldsfesr siassvqsep csgmvsgiis
     1321 psdlpdspgq tmppsrsktp pppppppqtv qtkqevpknk apsaekresg pkqaavnaav
     1381 qrvqvlpdad tllhfatest pdgfscsssl salsldepfi qkdvelrimp pvqendngne
     1441 teseqpeesn enqekeaekp tdsekdilde sddddieile eciisamptk ssrkakkpaq
     1501 ttsklpppva rkpsqlpvyk llpsqnrlqa qkhvsftpgd dmprvycveg tpinfstats
     1561 lsdltiespp nelaagegvr agaqssefek rdtiptegrs tdeaqrgkas svtvpelddn
     1621 kteegdilae cinsampkgk shkpfrvkki mdqvqqasms ssgtnknqld gktkkltspv
     1681 kpipqnteyr trvrkntdsk nnlnaernfs enkdskkqhl knnskdfndk lpnnedrvrg
     1741 sftfdsphhy tpiegtpycf srndslssld fddddvdlsr ekaelrkgke nkeseatvtn
     1801 hteltsnqqs anktpavtkq pinrgqsksv lqkqstfpqs skdipdrgaa tdeklqnfai
     1861 entpvcfsrn sslsslsdid qennnnnken epiketeppd sqgeaskpqa sgyapksfhv
     1921 edtpvcfsrn sslsslsids eddllqecis sampkkkkps rlkadnekhs prnmggilae
     1981 dltldlkdiq rpdsehglsp dsenfdwkai qegansivss lhqaaaaacl srqassdsds
     2041 ilslksgisl gspfhltpdq eekpftsnkg prilkpgeks tletkklese nkgikggkkv
     2101 ykslitgkvr snseissqmk qplqtnmpai srgrtmihip gvrnssssts pvskkgpplk
     2161 tpaskspseg qaattsprgt kpsvkselsp vtrqasqtag snkgpsrsgs rdstpsrpaq
     2221 qplsrpmqsp grnsispgrn gisppnklsq lprtsspsta stkssgsgkm sytspgrqms
     2281 qqnltkqtgl skngsgiprs esaskglnqm snsngsnkkv elsrmsstks sgsesdrser
     2341 pvlvrqstfi keapsptlrr kleesasfes lspssrpdsp trsqahtpvl spslpdmsls
     2401 thssvqsggw rklppnlspt ieyndgrpvk rhdiarshse spsrlpinrs gtwkrehskh
     2461 ssslprvstw rrtgssssil sassesseka ksedekhvns isgskqtken qvstkgtwrk
     2521 ikeseispts stsqttssga tngaesktli yqmapavskt edvwvriedc pinnprsgrs
     2581 ptgntppvid tvsekgnpnp kdskdnqgkq nvsngsaptr tmglenrlns fiqvdppdqk
     2641 gteakpgqsn npvpasetne ssiaertpfs ssssskhssp sgtvaarvsp fnynpsprks
     2701 sadgtsarps qiptpvsttt kkrdskpdsa epggtqspkr hsgsylvtsv
//
LOCUS       XP_061014195            2338 aa            linear   MAM 02-DEC-2023
DEFINITION  adenomatous polyposis coli protein isoform X11 [Dama dama].
ACCESSION   XP_061014195
VERSION     XP_061014195.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158212.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2338
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2338
                     /product="adenomatous polyposis coli protein isoform X11"
                     /calculated_mol_wt=254378
     Region          3..40
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          <11..40
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          50..82
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(73,77,81,120,124,128,165,169,173)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          90..131
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          136..176
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          140..174
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          178..218
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          182..218
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          219..506
                     /region_name="Arm_APC_u3"
                     /note="Armadillo-associated region on APC; pfam16629"
                     /db_xref="CDD:435476"
     Region          523..622
                     /region_name="APC_u5"
                     /note="Unstructured region on APC between 1st and 2nd
                     catenin-bdg motifs; pfam16630"
                     /db_xref="CDD:406923"
     Region          772..857
                     /region_name="APC_u9"
                     /note="Unstructured region on APC between 1st two
                     creatine-rich regions; pfam16633"
                     /db_xref="CDD:435478"
     Region          860..882
                     /region_name="APC_r"
                     /note="APC repeat; pfam05923"
                     /db_xref="CDD:461781"
     Region          1129..1152
                     /region_name="APC_r"
                     /note="APC repeat; pfam05923"
                     /db_xref="CDD:461781"
     Region          1154..1207
                     /region_name="APC_u13"
                     /note="Unstructured region on APC between APC_crr and
                     SAMP; pfam16634"
                     /db_xref="CDD:406927"
     Region          1211..1229
                     /region_name="SAMP"
                     /note="SAMP Motif; pfam05924"
                     /db_xref="CDD:461782"
     Region          1238..1331
                     /region_name="APC_u14"
                     /note="Unstructured region on APC between SAMP and
                     APC_crr; pfam16635"
                     /db_xref="CDD:435479"
     Region          1365..1439
                     /region_name="APC_u15"
                     /note="Unstructured region on APC between APC_crr regions
                     5 and 6; pfam16636"
                     /db_xref="CDD:435480"
     Region          1527..1546
                     /region_name="SAMP"
                     /note="SAMP Motif; pfam05924"
                     /db_xref="CDD:461782"
     Region          1717..2062
                     /region_name="APC_basic"
                     /note="APC basic domain; pfam05956"
                     /db_xref="CDD:428690"
     Region          2164..2338
                     /region_name="EB1_binding"
                     /note="EB-1 Binding Domain; pfam05937"
                     /db_xref="CDD:399141"
     CDS             1..2338
                     /gene="APC"
                     /coded_by="XM_061158212.1:141..7157"
                     /db_xref="GeneID:133066790"
ORIGIN      
        1 mnlatlcsmk gcmralvaql ksdsedlqqv iasvlrnlsw radvnskktl revgsvkalm
       61 ecalevkkes tlksvlsalw nlsahctenk adicavggal aflvgtltyr sqtntlaiie
      121 sgggilrnvs sliatnedhr qilrennclq tllqhlkshs ltivsnacgt lwnlsarnpk
      181 dqealwdmga vsmlknlihs khkmiamgsa aalrnlmanr pakykdanim spgsslpslh
      241 vrkqkaleae ldaqhlsetf dnidnlspka shrskqrhkq nlygdygfds nrhddnrsdn
      301 fntgnmtvls pylnttvlps ssssrgslds srsekdrsle rergislgny hpatenpgts
      361 skrglqistt aaqiakvmee vsaihtsqed rssgsttelh cgtdernalr rsstahthan
      421 tynftksens nrtcpipyak veykrssnds lnsvsssdgy gkrgqmkpsi esyseddesk
      481 fcsygqypad lahkihsanh mddndgeldt pinyslkysd eqlnsgrqsp sqnerwarpk
      541 hiledeikpn eqrqsrsqst aypvypestd dkhlkfqphf gqqecvspyr sraangsepn
      601 rvgsnhgisq nvnqslcqed dyeddkptny seryseegqh eeeerptnys ikyseekhhv
      661 dqpidyslky ttdipssqkp afsfsknssg qstktehiss ssentstpss nakrqnqlhp
      721 ssaqsrssqt pkatsssckv psinqetiqt ycvedtpicf srcsslssls saedeigcdq
      781 ttqeadpans lqiaeikdns gprpnedsvs kvpavsqhvr tkssrlqasg lssesarhka
      841 vefssgaksp sksgaqtpks ppehyvqetp lmfsrctsvs sldsfesrsi assvqsepcs
      901 gmvsgiisps dlpdspgqtm ppsrsktppp pppppqtvqt kqevpknkap saekresgpk
      961 qaavnaavqr vqvlpdadtl lhfatestpd gfscssslsa lsldepfiqk dvelrimppv
     1021 qendngnete seqpeesnen qekeaekptd sekdildesd dddieileec iisamptkss
     1081 rkakkpaqtt sklpppvark psqlpvykll psqnrlqaqk hvsftpgddm prvycvegtp
     1141 infstatsls dltiesppne laagegvrag aqssefekrd tiptegrstd eaqrgkassv
     1201 tvpelddnkt eegdilaeci nsampkgksh kpfrvkkimd qvqqasmsss gtnknqldgk
     1261 tkkltspvkp ipqnteyrtr vrkntdsknn lnaernfsen kdskkqhlkn nskdfndklp
     1321 nnedrvrgsf tfdsphhytp iegtpycfsr ndslssldfd dddvdlsrek aelrkgkenk
     1381 eseatvtnht eltsnqqsan ktpavtkqpi nrgqsksvlq kqstfpqssk dipdrgaatd
     1441 eklqnfaien tpvcfsrnss lsslsdidqe nnnnnkenep iketeppdsq geaskpqasg
     1501 yapksfhved tpvcfsrnss lsslsidsed dllqecissa mpkkkkpsrl kadnekhspr
     1561 nmggilaedl tldlkdiqrp dsehglspds enfdwkaiqe gansivsslh qaaaaaclsr
     1621 qassdsdsil slksgislgs pfhltpdqee kpftsnkgpr ilkpgekstl etkklesenk
     1681 gikggkkvyk slitgkvrsn seissqmkqp lqtnmpaisr grtmihipgv rnsssstspv
     1741 skkgpplktp askspsegqa attsprgtkp svkselspvt rqasqtagsn kgpsrsgsrd
     1801 stpsrpaqqp lsrpmqspgr nsispgrngi sppnklsqlp rtsspstast kssgsgkmsy
     1861 tspgrqmsqq nltkqtglsk ngsgiprses askglnqmsn sngsnkkvel srmsstkssg
     1921 sesdrserpv lvrqstfike apsptlrrkl eesasfesls pssrpdsptr sqahtpvlsp
     1981 slpdmslsth ssvqsggwrk lppnlsptie yndgrpvkrh diarshsesp srlpinrsgt
     2041 wkrehskhss slprvstwrr tgssssilsa ssessekaks edekhvnsis gskqtkenqv
     2101 stkgtwrkik eseisptsst sqttssgatn gaesktliyq mapavskted vwvriedcpi
     2161 nnprsgrspt gntppvidtv sekgnpnpkd skdnqgkqnv sngsaptrtm glenrlnsfi
     2221 qvdppdqkgt eakpgqsnnp vpasetness iaertpfsss ssskhsspsg tvaarvspfn
     2281 ynpsprkssa dgtsarpsqi ptpvstttkk rdskpdsaep ggtqspkrhs gsylvtsv
//
LOCUS       XP_061014197             189 aa            linear   MAM 02-DEC-2023
DEFINITION  receptor expression-enhancing protein 5 [Dama dama].
ACCESSION   XP_061014197
VERSION     XP_061014197.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158214.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..189
                     /product="receptor expression-enhancing protein 5"
                     /calculated_mol_wt=21227
     Region          67..144
                     /region_name="TB2_DP1_HVA22"
                     /note="TB2/DP1, HVA22 family; pfam03134"
                     /db_xref="CDD:460820"
     CDS             1..189
                     /gene="REEP5"
                     /coded_by="XM_061158214.1:79..648"
                     /db_xref="GeneID:133066793"
ORIGIN      
        1 msaamrqrfd qflhqkncvt dllakieakt gvnrsfialg vigllalylv fgygasllcn
       61 ligfaypayv smkaiespnk eddtqwltyw vvygvfsive ffsdlflswf pfyymlkcgf
      121 llwcmapspa ngadllykrv irpfflkhes qvdsvvsdlk draketadai skeakkaavn
      181 llgeekkst
//
LOCUS       XP_061014198             144 aa            linear   MAM 02-DEC-2023
DEFINITION  signal recognition particle 19 kDa protein [Dama dama].
ACCESSION   XP_061014198
VERSION     XP_061014198.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158215.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..144
                     /product="signal recognition particle 19 kDa protein"
                     /calculated_mol_wt=16009
     Region          17..115
                     /region_name="SRP19"
                     /note="SRP19 protein; pfam01922"
                     /db_xref="CDD:460383"
     CDS             1..144
                     /gene="SRP19"
                     /coded_by="XM_061158215.1:124..558"
                     /db_xref="GeneID:133066795"
ORIGIN      
        1 macaaarspa dqdrficiyp aylnnkktia egrripiska venptateiq dvcaavglnv
       61 fleknkmysr ewnrdlqyrg rvrvqlkqed gslclvqfps rksvmlyaae mipklktrtq
      121 ktgggdqslq qgegskkgkg kkkk
//
LOCUS       XP_061014199             829 aa            linear   MAM 02-DEC-2023
DEFINITION  colorectal mutant cancer protein isoform X1 [Dama dama].
ACCESSION   XP_061014199
VERSION     XP_061014199.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158216.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..829
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..829
                     /product="colorectal mutant cancer protein isoform X1"
                     /calculated_mol_wt=92630
     Region          <15..>290
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          22..>113
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          402..465
                     /region_name="MCC-bdg_PDZ"
                     /note="PDZ domain of MCC-2 bdg protein for Usher syndrome;
                     pfam10506"
                     /db_xref="CDD:463122"
     Region          <609..>821
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          732..798
                     /region_name="MCC-bdg_PDZ"
                     /note="PDZ domain of MCC-2 bdg protein for Usher syndrome;
                     pfam10506"
                     /db_xref="CDD:463122"
     CDS             1..829
                     /gene="MCC"
                     /coded_by="XM_061158216.1:197..2686"
                     /db_xref="GeneID:133066796"
ORIGIN      
        1 mnsgvamkyg ndssaelsel hlaalaslkg divelnkrlq qtererdlle kklakaqceq
       61 shlmrehedv qerttlryee ritelhsvia elnkkidrlq gstireedey selrselsqs
      121 qheanedsrs mdqdqtsvsv penqstmvta dmdncsdlns elqrvltgle nvvccrkkss
      181 cslsvaevdr hieqlttase hcdlaiktve eiegvlgrdl ypslaeercr wekelaglre
      241 enesltamlc skeeelhrtk aatnavreer drlrrrvrel qtrlqsvqat gpsspgrlts
      301 anrpvnpstg elstssssnd ipiakiaerv klsktrsess ssdrpvlgse issigvsssv
      361 aehlahslqd csniqeifqt lyshgsaise skirefevet erlnsriehl ksqndlltit
      421 leecksnaer lsmlvgkyes natalrlalq yseqcieaye lllalaeseq slilgqfraa
      481 gvgsspgdqs gdenitqmlk rahdcrktae naakallmkl dgscggafav agcsgqpwes
      541 lssnshtstt sstasscdte ftkedeqrlk dyiqqlrndr aavkltmlel esvhidplsy
      601 dvkprgdsqr ldlenavlmq elmamkeema elkaqlylle kekkalelkl streaqeqay
      661 lvhiehlkse veeqkeqrtr slsstssggk dtaskecpda aspalslael rtacgdsela
      721 aeftnairre kklkarvqel vsalerltks seirhqqsae fvndlkrans nlvaayekak
      781 kkhqnklkkl esqmmamver hetqvrmlkq rialleeens rphtnetsl
//
LOCUS       XP_061014200             699 aa            linear   MAM 02-DEC-2023
DEFINITION  colorectal mutant cancer protein isoform X2 [Dama dama].
ACCESSION   XP_061014200
VERSION     XP_061014200.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158217.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..699
                     /product="colorectal mutant cancer protein isoform X2"
                     /calculated_mol_wt=77623
     Region          272..335
                     /region_name="MCC-bdg_PDZ"
                     /note="PDZ domain of MCC-2 bdg protein for Usher syndrome;
                     pfam10506"
                     /db_xref="CDD:463122"
     Region          <479..>691
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          602..668
                     /region_name="MCC-bdg_PDZ"
                     /note="PDZ domain of MCC-2 bdg protein for Usher syndrome;
                     pfam10506"
                     /db_xref="CDD:463122"
     CDS             1..699
                     /gene="MCC"
                     /coded_by="XM_061158217.1:214..2313"
                     /db_xref="GeneID:133066796"
ORIGIN      
        1 mdqdqtsvsv penqstmvta dmdncsdlns elqrvltgle nvvccrkkss cslsvaevdr
       61 hieqlttase hcdlaiktve eiegvlgrdl ypslaeercr wekelaglre enesltamlc
      121 skeeelhrtk aatnavreer drlrrrvrel qtrlqsvqat gpsspgrlts anrpvnpstg
      181 elstssssnd ipiakiaerv klsktrsess ssdrpvlgse issigvsssv aehlahslqd
      241 csniqeifqt lyshgsaise skirefevet erlnsriehl ksqndlltit leecksnaer
      301 lsmlvgkyes natalrlalq yseqcieaye lllalaeseq slilgqfraa gvgsspgdqs
      361 gdenitqmlk rahdcrktae naakallmkl dgscggafav agcsgqpwes lssnshtstt
      421 sstasscdte ftkedeqrlk dyiqqlrndr aavkltmlel esvhidplsy dvkprgdsqr
      481 ldlenavlmq elmamkeema elkaqlylle kekkalelkl streaqeqay lvhiehlkse
      541 veeqkeqrtr slsstssggk dtaskecpda aspalslael rtacgdsela aeftnairre
      601 kklkarvqel vsalerltks seirhqqsae fvndlkrans nlvaayekak kkhqnklkkl
      661 esqmmamver hetqvrmlkq rialleeens rphtnetsl
//
LOCUS       XP_061014201             766 aa            linear   MAM 02-DEC-2023
DEFINITION  colorectal mutant cancer protein isoform X3 [Dama dama].
ACCESSION   XP_061014201
VERSION     XP_061014201.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158218.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..766
                     /product="colorectal mutant cancer protein isoform X3"
                     /calculated_mol_wt=85637
     Region          339..402
                     /region_name="MCC-bdg_PDZ"
                     /note="PDZ domain of MCC-2 bdg protein for Usher syndrome;
                     pfam10506"
                     /db_xref="CDD:463122"
     Region          <546..>758
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          669..735
                     /region_name="MCC-bdg_PDZ"
                     /note="PDZ domain of MCC-2 bdg protein for Usher syndrome;
                     pfam10506"
                     /db_xref="CDD:463122"
     CDS             1..766
                     /gene="MCC"
                     /coded_by="XM_061158218.1:191..2491"
                     /db_xref="GeneID:133066796"
ORIGIN      
        1 mrehedvqer ttlryeerit elhsviaeln kkidrlqgst ireedeysel rselsqsqhe
       61 anedsrsmdq dqtsvsvpen qstmvtadmd ncsdlnselq rvltglenvv ccrkksscsl
      121 svaevdrhie qlttasehcd laiktveeie gvlgrdlyps laeercrwek elaglreene
      181 sltamlcske eelhrtkaat navreerdrl rrrvrelqtr lqsvqatgps spgrltsanr
      241 pvnpstgels tssssndipi akiaervkls ktrsessssd rpvlgseiss igvsssvaeh
      301 lahslqdcsn iqeifqtlys hgsaiseski refeveterl nsriehlksq ndlltitlee
      361 cksnaerlsm lvgkyesnat alrlalqyse qcieayelll alaeseqsli lgqfraagvg
      421 sspgdqsgde nitqmlkrah dcrktaenaa kallmkldgs cggafavagc sgqpweslss
      481 nshtsttsst asscdteftk edeqrlkdyi qqlrndraav kltmlelesv hidplsydvk
      541 prgdsqrldl enavlmqelm amkeemaelk aqlyllekek kalelklstr eaqeqaylvh
      601 iehlksevee qkeqrtrsls stssggkdta skecpdaasp alslaelrta cgdselaaef
      661 tnairrekkl karvqelvsa lerltkssei rhqqsaefvn dlkransnlv aayekakkkh
      721 qnklkklesq mmamverhet qvrmlkqria lleeensrph tnetsl
//
LOCUS       XP_061014202             423 aa            linear   MAM 02-DEC-2023
DEFINITION  m7GpppN-mRNA hydrolase isoform X1 [Dama dama].
ACCESSION   XP_061014202
VERSION     XP_061014202.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158219.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..423
                     /product="m7GpppN-mRNA hydrolase isoform X1"
                     /calculated_mol_wt=48615
     Region          12..93
                     /region_name="DCP2"
                     /note="Dcp2, box A domain; pfam05026"
                     /db_xref="CDD:428265"
     Region          97..246
                     /region_name="NUDIX_Dcp2p_Nudt20"
                     /note="mRNA decapping enzyme 2; cd03672"
                     /db_xref="CDD:467540"
     CDS             1..423
                     /gene="DCP2"
                     /coded_by="XM_061158219.1:124..1395"
                     /db_xref="GeneID:133066797"
ORIGIN      
        1 metkrveipg svlddlcsrf ilhipseerd nairvcfqie lahwfyldfy mqntpglpqc
       61 girdfakavf nhcpfllpqg edvekildew keykmgvpty gaiildetle nvllvqgyla
      121 ksgwgfpkgk vnkeeaphdc aarevfeetg fdikdyickd dyielrindq larlyiipgi
      181 pkdtkfnpkt rreirniewf sieklpchrn dmtpksklgl apnkffmaip firplrdwls
      241 rrfgdssdsd ngfssagstp akptveklsr tkfrhsqqlf pegspgdqwv khrqplqhkp
      301 ynnhhaemsd llkaknqsir gngrkqyqds pnqkkktngi hsqpakqqnp lvkcekklhp
      361 rklqdtfetd avydspysge dqllehaegq svacnghckf pfssraflsf kfdhnaimki
      421 ldl
//
LOCUS       XP_061014203             381 aa            linear   MAM 02-DEC-2023
DEFINITION  m7GpppN-mRNA hydrolase isoform X2 [Dama dama].
ACCESSION   XP_061014203
VERSION     XP_061014203.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158220.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..381
                     /product="m7GpppN-mRNA hydrolase isoform X2"
                     /calculated_mol_wt=42393
     Region          70..204
                     /region_name="NUDIX_Dcp2p_Nudt20"
                     /note="mRNA decapping enzyme 2; cd03672"
                     /db_xref="CDD:467540"
     CDS             1..381
                     /gene="DCP2"
                     /coded_by="XM_061158220.1:518..1663"
                     /db_xref="GeneID:133066797"
ORIGIN      
        1 mwttgqtalt gataaaaaaa acppasrslp avpsvpgrae pgctapavgp hhgdqtggds
       61 rqrpgrslqv llvqgylaks gwgfpkgkvn keeaphdcaa revfeetgfd ikdyickddy
      121 ielrindqla rlyiipgipk dtkfnpktrr eirniewfsi eklpchrndm tpksklglap
      181 nkffmaipfi rplrdwlsrr fgdssdsdng fssagstpak ptveklsrtk frhsqqlfpe
      241 gspgdqwvkh rqplqhkpyn nhhaemsdll kaknqsirgn grkqyqdspn qkkktngihs
      301 qpakqqnplv kcekklhprk lqdtfetdav ydspysgedq llehaegqsv acnghckfpf
      361 ssraflsfkf dhnaimkild l
//
LOCUS       XP_061014204             372 aa            linear   MAM 02-DEC-2023
DEFINITION  m7GpppN-mRNA hydrolase isoform X3 [Dama dama].
ACCESSION   XP_061014204
VERSION     XP_061014204.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158221.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..372
                     /product="m7GpppN-mRNA hydrolase isoform X3"
                     /calculated_mol_wt=42471
     Region          12..93
                     /region_name="DCP2"
                     /note="Dcp2, box A domain; pfam05026"
                     /db_xref="CDD:428265"
     Region          97..195
                     /region_name="NUDIX_Hydrolase"
                     /note="NUDIX hydrolase superfamily; cl00447"
                     /db_xref="CDD:469772"
     CDS             1..372
                     /gene="DCP2"
                     /coded_by="XM_061158221.1:124..1242"
                     /db_xref="GeneID:133066797"
ORIGIN      
        1 metkrveipg svlddlcsrf ilhipseerd nairvcfqie lahwfyldfy mqntpglpqc
       61 girdfakavf nhcpfllpqg edvekildew keykmgvpty gaiildetle nvllvqgyla
      121 ksgwgfpkgk vnkeeaphdc aareniewfs ieklpchrnd mtpksklgla pnkffmaipf
      181 irplrdwlsr rfgdssdsdn gfssagstpa kptveklsrt kfrhsqqlfp egspgdqwvk
      241 hrqplqhkpy nnhhaemsdl lkaknqsirg ngrkqyqdsp nqkkktngih sqpakqqnpl
      301 vkcekklhpr klqdtfetda vydspysged qllehaegqs vacnghckfp fssraflsfk
      361 fdhnaimkil dl
//
LOCUS       XP_061014205             112 aa            linear   MAM 02-DEC-2023
DEFINITION  conserved oligomeric Golgi complex subunit 2-like isoform X1 [Dama
            dama].
ACCESSION   XP_061014205
VERSION     XP_061014205.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158222.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..112
                     /product="conserved oligomeric Golgi complex subunit
                     2-like isoform X1"
                     /calculated_mol_wt=13024
     Region          15..>103
                     /region_name="COG2"
                     /note="COG (conserved oligomeric Golgi) complex component,
                     COG2; cl19297"
                     /db_xref="CDD:473160"
     CDS             1..112
                     /gene="LOC133066800"
                     /coded_by="XM_061158222.1:139..477"
                     /db_xref="GeneID:133066800"
ORIGIN      
        1 meksrmnlpk gpdtlcfdkd efmkedfdvd hfmsdcrkrv qlealrddle lyykllktam
       61 velinkdyad fvnlstnllr sqfdccqpql lfstvaksiq sevcstefck pf
//
LOCUS       XP_061014206              93 aa            linear   MAM 02-DEC-2023
DEFINITION  conserved oligomeric Golgi complex subunit 2-like isoform X2 [Dama
            dama].
ACCESSION   XP_061014206
VERSION     XP_061014206.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158223.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..93
                     /product="conserved oligomeric Golgi complex subunit
                     2-like isoform X2"
                     /calculated_mol_wt=10757
     Region          15..>86
                     /region_name="COG2"
                     /note="COG (conserved oligomeric Golgi) complex component,
                     COG2; cl19297"
                     /db_xref="CDD:473160"
     CDS             1..93
                     /gene="LOC133066800"
                     /coded_by="XM_061158223.1:139..420"
                     /db_xref="GeneID:133066800"
ORIGIN      
        1 meksrmnlpk gpdtlcfdkd efmkedfdvd hfmsdcrkrv qlealrddle lyykllktam
       61 velinkdyad fvnlstnlsl rssvsegira vde
//
LOCUS       XP_061014207              81 aa            linear   MAM 02-DEC-2023
DEFINITION  conserved oligomeric Golgi complex subunit 2-like isoform X3 [Dama
            dama].
ACCESSION   XP_061014207
VERSION     XP_061014207.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158224.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..81
                     /product="conserved oligomeric Golgi complex subunit
                     2-like isoform X3"
                     /calculated_mol_wt=9470
     Region          15..>81
                     /region_name="COG2"
                     /note="COG (conserved oligomeric Golgi) complex component,
                     COG2; cl19297"
                     /db_xref="CDD:473160"
     CDS             1..81
                     /gene="LOC133066800"
                     /coded_by="XM_061158224.1:139..384"
                     /db_xref="GeneID:133066800"
ORIGIN      
        1 meksrmnlpk gpdtlcfdkd efmkedfdvd hfmsdcrkrv qlealrddle lyykllktam
       61 velinkdyad fvnlstnlvs i
//
LOCUS       XP_061014208             794 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: disintegrin and metalloproteinase
            domain-containing protein 20 [Dama dama].
ACCESSION   XP_061014208
VERSION     XP_061014208.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158225.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 9% of CDS bases
            frameshifts :: corrected 2 indels
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..794
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..794
                     /product="LOW QUALITY PROTEIN: disintegrin and
                     metalloproteinase domain-containing protein 20"
                     /calculated_mol_wt=88800
     Region          85..203
                     /region_name="Pep_M12B_propep"
                     /note="Reprolysin family propeptide; pfam01562"
                     /db_xref="CDD:460254"
     Region          251..439
                     /region_name="ZnMc_adamalysin_II_like"
                     /note="Zinc-dependent metalloprotease; adamalysin_II_like
                     subfamily. Adamalysin II is a snake venom zinc
                     endopeptidase. This subfamily contains other snake venom
                     metalloproteinases, as well as membrane-anchored
                     metalloproteases belonging to the ADAM family; cd04269"
                     /db_xref="CDD:239797"
     Site            order(385..386,389,395)
                     /site_type="active"
                     /db_xref="CDD:239797"
     Region          459..531
                     /region_name="Disintegrin"
                     /note="pfam00200"
                     /db_xref="CDD:459709"
     Region          535..671
                     /region_name="ACR"
                     /note="ADAM Cysteine-Rich Domain; smart00608"
                     /db_xref="CDD:214743"
     CDS             1..794
                     /gene="ADAM20"
                     /coded_by="XM_061158225.1:1..2385"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 4 bases in 2 codons"
                     /db_xref="GeneID:133066804"
ORIGIN      
        1 mvqffqdtdp xkghpctlns seggarpavp dappssalsr wlhndxvaea lvhfrvtpll
       61 lwsgvclfis ghsqarpsqh fsspelvipl kvtgwgrnak vpgwlsyslr fggqrhiahm
      121 kvkkflvsrp lpvftytdqr slqqdqpfvp ddcyyhgyve gvpkslvals tcsggfrgil
      181 qindlayeie pvrfsatfeh rvyrididda qfprmrcglt eeeiarqlel qelrnftlmq
      241 ssytgwwthl rflelvvvvd nlrfihsgsn vsviqneian vvnvinslyh pldvhviltg
      301 leiwtegnli atdnmdtmle dfafwkffnl dnrlphdaah llvkksfgrq lglayvagvc
      361 qyplncgvaa feddslydfa vivthelghn lgmlhdnqsc vcelqfcimy pakmvtnkfs
      421 ncsyaefwnn vmrngvclys ppnpanivri kscgnlvvee geecdcgtig qcardrcclp
      481 dctlkpgaac afgscckkck vrsagtlcrk qinqcdlpew cngtshqcpe dvyvqdglpc
      541 sdsaycykkn cvnhdeqcre ifgkdarsas lscyeeintq gnrfghcgis dieyikcavs
      601 dilcgrvqce nvrvipnlie hstvyqfyvn dttcwgtdyh igmsipdigq vkdgtmcgqk
      661 kicidsrcvn mvplsqtchp etchmkgicn nkqqchcnpg wappyckdeg nggsnssgpp
      721 dnsqddeede adepeqaega eqtkiektql wlipliclfv cfflvlckks irkkepemmt
      781 eegmeeeeve eesd
//
LOCUS       XP_061014209             718 aa            linear   MAM 02-DEC-2023
DEFINITION  disintegrin and metalloproteinase domain-containing protein 21
            [Dama dama].
ACCESSION   XP_061014209
VERSION     XP_061014209.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158226.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..718
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..718
                     /product="disintegrin and metalloproteinase
                     domain-containing protein 21"
                     /calculated_mol_wt=79978
     Region          40..158
                     /region_name="Pep_M12B_propep"
                     /note="Reprolysin family propeptide; pfam01562"
                     /db_xref="CDD:460254"
     Region          206..394
                     /region_name="ZnMc_adamalysin_II_like"
                     /note="Zinc-dependent metalloprotease; adamalysin_II_like
                     subfamily. Adamalysin II is a snake venom zinc
                     endopeptidase. This subfamily contains other snake venom
                     metalloproteinases, as well as membrane-anchored
                     metalloproteases belonging to the ADAM family; cd04269"
                     /db_xref="CDD:239797"
     Site            order(339..340,343,349)
                     /site_type="active"
                     /db_xref="CDD:239797"
     Region          413..485
                     /region_name="Disintegrin"
                     /note="pfam00200"
                     /db_xref="CDD:459709"
     Region          489..625
                     /region_name="ACR"
                     /note="ADAM Cysteine-Rich Domain; smart00608"
                     /db_xref="CDD:214743"
     CDS             1..718
                     /gene="ADAM21"
                     /coded_by="XM_061158226.1:37..2193"
                     /db_xref="GeneID:133066805"
ORIGIN      
        1 mvtgeaivsm rlvgllwlev slfssglsqe rhsqslnspd vviplkvtnr grgpnapgwl
       61 syslqfggqr rvvyirakki lvskplpvft ytdqhalqqd qpfvsndcyy hgyvegvpes
      121 lvalstcagg fqgmlrindf tyeikpirhs ttfehlvyki ntketqfspm kcgltnkaah
      181 qqlefeeaer ltlkqnsayn rwahlwflel vvvvdhnffi ysqsnfskvq envfvvvniv
      241 dsiyqqlgty vilmgieiwn hgnvfplisi eqvledfsqw kqislselqy daahifiens
      301 lisvlgiayv agicrppldc gvnnfkgdpw svfaltvahe lghtlgmqhd eefcvcgqra
      361 clmnairlpa erftncsyae ftkttlnqgs clhnppipga vfmlkrcgng vteggeqcdc
      421 gsvkqcehdp ccllnctlrp gaacafglcc kdckfvpsge lcrpqinecd lpewcngtsh
      481 qcpedvhvqd gipctdsafc yqkscnshde qcreifgega ksasqrcyke insqgnrfgh
      541 cgvngtiylk cpisdsfcgr vhcenvgnip hlrdhsnfqy thingvtcws idyhlemsip
      601 dvgevkdgtm cgpgkicihk kcvslsllsq vclpetcnmk gicnnkhhch cgygwsppyc
      661 lhrgtggsvd sgpasarrif lpivvplglf vllllliavf mylqkcfrpk ktkthspk
//
LOCUS       XP_061014210             284 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133066807 [Dama dama].
ACCESSION   XP_061014210
VERSION     XP_061014210.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158227.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 24% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..284
                     /product="uncharacterized protein LOC133066807"
                     /calculated_mol_wt=30112
     CDS             1..284
                     /gene="LOC133066807"
                     /coded_by="XM_061158227.1:1..855"
                     /db_xref="GeneID:133066807"
ORIGIN      
        1 mfpsavtalt gagrsqsper agrerarfge resesargag praresaggw gaesgrgtpt
       61 sgrrrraagg erggcpgrpr ggvgarrqrl vllcgardpa rlvgrrlrgk estssrdcgg
      121 glgpgaelhr eswnswrvrg gvsarlrsar sgkepaqpkl drgtlqgarv apdwlgerga
      181 saretrtqap psprqkqspa epgsssfvrd sgrllglrsp lyrrgkgsre pggaletcvs
      241 gttanycdsp rllcpwdfsg kntgakhlts isthfggere wkqh
//
LOCUS       XP_061014212             195 aa            linear   MAM 02-DEC-2023
DEFINITION  proline-rich protein 2-like [Dama dama].
ACCESSION   XP_061014212
VERSION     XP_061014212.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158229.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..195
                     /product="proline-rich protein 2-like"
                     /calculated_mol_wt=20705
     Region          <30..>130
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..195
                     /gene="LOC133066813"
                     /coded_by="XM_061158229.1:1..588"
                     /db_xref="GeneID:133066813"
ORIGIN      
        1 mlvrnevkel dnyyikmgrt erpspggrdr pkqppprarl phrppvpgvg etipklltay
       61 pgsprlqprp gtpfppagqp dppspagals arpvcrrrps pdkvqatesl pqteprtggr
      121 hprphppgap raqagggrgr gaatvaaagp rprcsratph pgpdppallp rpgpgpglht
      181 piqprrreaw laphr
//
LOCUS       XP_061014213             220 aa            linear   MAM 02-DEC-2023
DEFINITION  low molecular weight phosphotyrosine protein phosphatase-like [Dama
            dama].
ACCESSION   XP_061014213
VERSION     XP_061014213.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158230.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..220
                     /product="low molecular weight phosphotyrosine protein
                     phosphatase-like"
                     /calculated_mol_wt=25149
     Region          13..157
                     /region_name="LMWPTP"
                     /note="Low molecular weight protein tyrosine phosphatase;
                     cd16343"
                     /db_xref="CDD:319971"
     Site            order(19..26,57,136,138)
                     /site_type="active"
                     /db_xref="CDD:319971"
     CDS             1..220
                     /gene="LOC133066814"
                     /coded_by="XM_061158230.1:1..663"
                     /db_xref="GeneID:133066814"
ORIGIN      
        1 metarpkslr vtksvlfvcl gnicrspiae avfrklvtdq nisdnwrids aatstyelgn
       61 ppdyrgqacm kkhgirmshv arqvtkedfa tfdyilcmde snlrdlnrks nqvkncraki
      121 ellgsydpqk qliiedpyyg ndedfetvyq qrvrccrpsw rrsadqavpl wprlvprghv
      181 stlnsvpsep rpqpslqltr cfspdkiivd rnqslclake
//
LOCUS       XP_061014214              54 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: small integral membrane protein 27-like [Dama
            dama].
ACCESSION   XP_061014214
VERSION     XP_061014214.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158231.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 3% of CDS bases
            internal stop codons :: corrected 2 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..54
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..54
                     /product="LOW QUALITY PROTEIN: small integral membrane
                     protein 27-like"
                     /calculated_mol_wt=5900
     CDS             1..54
                     /gene="LOC133066816"
                     /coded_by="XM_061158231.1:1..165"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 2 bases at 2
                     genomic stop codons"
                     /db_xref="GeneID:133066816"
ORIGIN      
        1 mkpvschtlg qiysalysvi llswgyiiya sivaixxqlr keypskifrm sedf
//
LOCUS       XP_061014217             256 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA polymerase-associated protein LEO1-like [Dama dama].
ACCESSION   XP_061014217
VERSION     XP_061014217.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158234.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..256
                     /product="RNA polymerase-associated protein LEO1-like"
                     /calculated_mol_wt=29098
     Region          1..152
                     /region_name="Leo1"
                     /note="Leo1-like protein; pfam04004"
                     /db_xref="CDD:461126"
     CDS             1..256
                     /gene="LOC133066825"
                     /coded_by="XM_061158234.1:1..771"
                     /db_xref="GeneID:133066825"
ORIGIN      
        1 msrpfdpqyy edefenkkml deeertrlkl kientirwri crdkdgnkik esnarivkws
       61 dgslslhlgn evfdvykapm qanhnhlfir edtglqgqav fkskltfrph atdyathkkv
      121 tlplasrcsr mqtirilpva gpdpecqrve likslqkeaa rlrasahqet irlqnqagps
      181 apyqdpnsde egeavknhdq gergeegari yspesdegpd edgaqrslta kklttdemnp
      241 pergkqgakr krmtea
//
LOCUS       XP_061014218            1105 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 72 [Dama dama].
ACCESSION   XP_061014218
VERSION     XP_061014218.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158235.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1105
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1105
                     /product="WD repeat-containing protein 72"
                     /calculated_mol_wt=123793
     Region          14..>191
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          20..60
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          66..107
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          112..152
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          160..206
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          213..259
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          267..315
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          324..353
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          405..>596
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          408..460
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          466..508
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          513..555
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          562..597
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..1105
                     /gene="WDR72"
                     /coded_by="XM_061158235.1:1..3318"
                     /db_xref="GeneID:133066830"
ORIGIN      
        1 mrsslqaval wgkkapphsi taimitddqq mivtgsqegq lclwnlssel kisakellfg
       61 hsasvmclar ardfskqpfv vsaaengemc vwnvtngqcv ekamlpyrht aicyyhcssr
      121 mtgegwllcc geyqdvliid akslviihtf issqspdwin cicivhsmti qedsllavsv
      181 agelkvwdls ssinsiqekq dvyekeskfl nslncrairf ctyterlllv vfskcwkvyd
      241 ycdfsllwte vsgsgqffag gevlaahrii iwtedghsyi yqllnsglsk siypadgtll
      301 ketiyphllc stsvqenkld qslpfvmgym nerkepfyki lfsgevsgri tlwhipdvpv
      361 skfdgsprei pitttwtlqd nfdkhyttsq sisdyfsglk denetavvts seyvpsldkl
      421 icgcedgtif itqalnaaka glleggsllk gslpqkvlkg hhhsvtslly phglsskldq
      481 swlvsgdqds wvilwnifte eilhkfflqa glvtsllmsp enfklrsyqa iccvcsdhsv
      541 allhlegrrc llsarkhlfp vrmikwhpve nflivgcadd svyiweietg tlerhetger
      601 akiilnccdd sqlpkpdsvl pvasethkhk sveqrssnls qcgpipcpgl mvessckvad
      661 aksfsgpfnv llvktkwsni gfhillfdle slvelllptp icdvdpsnsf ycseilrrak
      721 stvekttltl rrnktvcgpl smevhakpvg espahgdnai klseendgik kqkkiksfkk
      781 mhpkqskkvd anltidtakl llscllpwgv dkeldnlcik hlnilklqgp vslglaaned
      841 hfslmlpgwd lyntemkkdy skvnlfsrkv ldlsdkytst fpnnsgmpkg lennsdslqe
      901 sntivyllsk lflvnklvnm plelaygmds afkiesmhnk mkspgndiln issfygylrn
      961 gkseshlpea disllklisc wrdqsvqvte aiqavllaev qkhmktlrkt pvnsepesva
     1021 kngdyemmqm lpkiewakep elqctthtfp lqtpvssvkh dsnsnsanfq dtedmpdrcv
     1081 leesespgkq khhlwiekvc scklc
//
LOCUS       XP_061014219            1192 aa            linear   MAM 02-DEC-2023
DEFINITION  protogenin [Dama dama].
ACCESSION   XP_061014219
VERSION     XP_061014219.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158236.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1192
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1192
                     /product="protogenin"
                     /calculated_mol_wt=131184
     Region          28..120
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          46..50
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          59..63
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          81..85
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          100..105
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          114..117
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          127..215
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          142..146
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          155..159
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          180..184
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          194..199
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          227..299
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          319..404
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          337..340
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          349..353
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          370..374
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          384..389
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          397..400
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          411..504
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(411,477,492)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(493..494,496..497)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          509..602
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(509,575,590)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(591..592,594..595)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Site            order(611,674,689)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          616..691
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     Region          <720..>928
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          813..903
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(895..896,898..899)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     CDS             1..1192
                     /gene="PRTG"
                     /coded_by="XM_061158236.1:1..3579"
                     /db_xref="GeneID:133066832"
ORIGIN      
        1 mhsprppppg sralilnsap lrvwcfselv fikepqditv trkdpvvldc qahgevpikv
       61 twlkngakvs enkriqvlsn gslyiseveg krgeqydegf yqclamnrhg ailsqkahlt
      121 lstisafevq pisievqegg varfackiss nppaaitwel nrttlsvtmd sdritalptg
      181 vlqiydvdqr dagnyrcvaa tvahrrksme asltvipgke sksfhtptiv agpqnittsl
      241 hqtvvlecva tgnpkpiisw srldhksidv fntrvlgngn lmisdirlqh agvyvcratt
      301 pgtrnftvam atltvlapps fvewpesltr pragtarfvc qaegipspkm swlkngrkih
      361 sngrikmyns klvinqiipe ddaiyqcmae nsqgsilsra rltvvmsedr psapynvhae
      421 tmsssailla werplynsdk viaysvhymk aeglnneeyq vvigndtthy iiddlepasn
      481 ytfyivaymp mgasqmsdhv iqntledvpl rppeisltsr sptdilvswl pipakyrrgq
      541 vvlyrlsfrl stdnsvqvle lpgtthehll eglkpdsvyl vritaatrvg lgessvwtsh
      601 rtpkatsvka pkspelhlep lncttisvkw qqdaedtati qgyklyykee gqqehgpifl
      661 dtsdllyals gldprrkyhv rllaynnmed gyqadqtvst pgcvsvrdrm vpppppphhl
      721 yakantsssi flhwrrpaft taqminytir cnpvglqnas lvlylqtset hmlvqglepn
      781 tkyefavrlh vdqlsspwsp vvyhstlpea pagppvgvkv tlieddtalv swrppdgpet
      841 vvtrytilya srkawiagew qvlhregait mallenlvag niyivkisas nevgegpfsn
      901 svelavlpke tpesnqrpkr ldsadakvys gyyhldqksm tgiavgvgia ltcilicgli
      961 liyrskarks tasktaqngt qqlprisasr asgnevgknl egaiengesl mpmimpnsfi
     1021 dakggtdlii nsygpiiknt pkkkwlffqd skkikaeqpq rrftqavcly qpgttilisd
     1081 edspsspgqt asfprpfgvt adtehsanse gshetgdsgr fshesndeih lssvistipv
     1141 tpssftgsnl ggdpsvrkce etavrsgaeq tsssvsqpap arlcfekkdf pi
//
LOCUS       XP_061014220             151 aa            linear   MAM 02-DEC-2023
DEFINITION  glycoprotein Xg-like [Dama dama].
ACCESSION   XP_061014220
VERSION     XP_061014220.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158237.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..151
                     /product="glycoprotein Xg-like"
                     /calculated_mol_wt=15760
     CDS             1..151
                     /gene="LOC133066833"
                     /coded_by="XM_061158237.1:1..456"
                     /db_xref="GeneID:133066833"
ORIGIN      
        1 mciypnprpp yhpqpgnpdt ggniyprpkp pyhpqpgnpd tggniyprpk pppprpqpgn
       61 sggflsdsdl sdgghypprp pagggggggy rpghdsyggg gystpgnqqg nmiaqiaspi
      121 vsvvvvtlig aavsyynrrr nclrtneprt i
//
LOCUS       XP_061014221             266 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase H1-like [Dama dama].
ACCESSION   XP_061014221
VERSION     XP_061014221.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158238.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 37% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..266
                     /product="serine/threonine-protein kinase H1-like"
                     /calculated_mol_wt=28904
     Region          <174..>221
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Region          <215..262
                     /region_name="COG5133"
                     /note="Uncharacterized conserved protein [Function
                     unknown]; cl00941"
                     /db_xref="CDD:470001"
     CDS             1..266
                     /gene="LOC133066834"
                     /coded_by="XM_061158238.1:1..801"
                     /db_xref="GeneID:133066834"
ORIGIN      
        1 mytnfqvrrl adlfkapkhv sggvrenars cdwlspplre prllevldpt wpgglqpspq
       61 gaprglpagg aqsrvsglra rlqpapgtgp aappprclcg rasrersrse ssapgrapga
      121 hrgptaaaaq ppagctlqas mkspnmetfk qqkvedfydi geelgrswgv scrvsrgelf
      181 nflaqkesls eeeatgfikq ilegvnylha kkiahfdlkl eiyisegths teedinkqin
      241 dkervaaame npslreiveq cvlepd
//
LOCUS       XP_061014222            1694 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: uncharacterized protein LOC133066835 [Dama
            dama].
ACCESSION   XP_061014222
VERSION     XP_061014222.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158239.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 7% of CDS bases
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1694
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1694
                     /product="LOW QUALITY PROTEIN: uncharacterized protein
                     LOC133066835"
                     /calculated_mol_wt=189617
     Region          5..126
                     /region_name="Gag_MA"
                     /note="Matrix protein (MA), p15; pfam01140"
                     /db_xref="CDD:426076"
     Region          211..417
                     /region_name="Gag_p30"
                     /note="Gag P30 core shell protein; pfam02093"
                     /db_xref="CDD:426597"
     Region          478..494
                     /region_name="ZnF_C2HC"
                     /note="zinc finger; smart00343"
                     /db_xref="CDD:197667"
     Region          524..605
                     /region_name="RP_RTVL_H_like"
                     /note="Retropepsin of the RTVL_H family of human
                     endogenous retrovirus-like elements; cd06095"
                     /db_xref="CDD:133159"
     Site            order(538,540,542,560..562,598)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133159"
     Site            538..540
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133159"
     Site            538
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133159"
     Region          691..905
                     /region_name="RT_ZFREV_like"
                     /note="A subfamily of reverse transcriptases (RTs) found
                     in sequences similar to the intact endogenous retrovirus
                     ZFERV from zebrafish and to Moloney murine leukemia virus
                     RT. An RT gene is usually indicative of a mobile element
                     such as a retrotransposon or...; cd03715"
                     /db_xref="CDD:239685"
     Site            order(696..697,731,745..748,751..752,823)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:239685"
     Site            order(782..787,822..823,854,856..857,901..902)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:239685"
     Site            order(782..787,822,856)
                     /site_type="other"
                     /note="putative NTP binding site [chemical binding]"
                     /db_xref="CDD:239685"
     Region          968..>1033
                     /region_name="RT_RNaseH_2"
                     /note="RNase H-like domain found in reverse transcriptase;
                     pfam17919"
                     /db_xref="CDD:465567"
     Region          993..1098
                     /region_name="RT_RNaseH"
                     /note="RNase H-like domain found in reverse transcriptase;
                     pfam17917"
                     /db_xref="CDD:465565"
     Region          1153..1293
                     /region_name="RNase_HI_RT_Bel"
                     /note="Bel/Pao family of RNase HI in long-term repeat
                     retroelements; cd09273"
                     /db_xref="CDD:260005"
     Site            order(1157..1160,1190..1192,1195,1216,1267,1290)
                     /site_type="other"
                     /note="RNA/DNA hybrid binding site [nucleotide binding]"
                     /db_xref="CDD:260005"
     Region          1340..1379
                     /region_name="zf-H2C2"
                     /note="H2C2 zinc finger; cl07828"
                     /db_xref="CDD:447530"
     Region          1400..1495
                     /region_name="rve"
                     /note="Integrase core domain; pfam00665"
                     /db_xref="CDD:459897"
     Region          1604..1684
                     /region_name="MLVIN_C"
                     /note="Murine leukemia virus (MLV) integrase (IN)
                     C-terminal domain; pfam18697"
                     /db_xref="CDD:436671"
     CDS             1..1694
                     /gene="LOC133066835"
                     /coded_by="XM_061158239.1:1..5085"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /db_xref="GeneID:133066835"
ORIGIN      
        1 mgqtqsgcsp ltlitdhfte vrarahnlsa eikksrmvif csaewpsfnv gwppegtfdl
       61 rtvrrvreii lrprsrhpdq vpyilvwedl ivsptpwiqp flppqaaaat eilvaeekkk
      121 ppaapsapvl qedsalldll ltpppyslpp piqpepplpq pspeaagggp atntrqrraa
      181 sprwpadsss aavlplralg ppdatgeqpl qywpfstsdl ynwrtqnapf serpkelinl
      241 letvlfthqp twddcqqllq ilftteerer iqlearklvp gdngqptanp atidssfpls
      301 rpqwdyntae gkerlrvyrq tllgglkaaa rrptnlakvg nvqqgreesp aaflerlmda
      361 frqytpmdpe aentrsalmm hfinqsapdi rkklqkidrl geksiqdlma vaekvynnre
      421 tpeekqtraa drqtrnmari llaatsaqpn erekrlkqla egklkpnpqg kpklgrnqca
      481 yckkeghwvk dcpkklkqgt nvlaledlrd xgrrgpeplp eprvtlkveg tpieflvdtg
      541 aehsvlldpq gklssktswv qgatgmkkys wttrrnldls tgrvshsfmv ipdcpypllg
      601 rdlltkigaq ihfspegvnv tdpagrpvqv ltmqiedeyr lhqgpsevsp eadmqqwlne
      661 ypqawaetgg pglakhrppi yielkpgaea vrvkqyqmpq eaqrgirphi rrllaqgilr
      721 pcqsnwntpl lpvrkpgsnd yrpvqdlrqv nqrvmdihpt vpnpytllss lnpnhqwytv
      781 ldlkdaffsl plapksqnif afewsdpeeg ihgqltwtrl pqgfknspti fdealhedlg
      841 dyriqhpqvt llqyvddlll atesqqtcle atrdllytlg elgyrasakk aqigrqevhy
      901 lgyilkegqr wlskarketv lkipkpqsqr gireflgsag fcrlwipgfa emakplyqat
      961 ketipfawte emdkafqdik aallsapalg lpdvtkpfll yvdenrgvak gvllqklgpw
     1021 krpvaylskk ldpvasgwpp clrmvaaval lvkdagkltl gqelqittph aiegilrqpp
     1081 drwisnarlt hyqglllnpt kiifqppttl npatllpdpd ldaplhdcad ilaqvcgira
     1141 dlkdvpllda eltwytdgss fvqngqryag aavttetevi waaplahgts aqkaelialt
     1201 ealkrgrekk ltvytdsrya fatahihgai yrerglltae gktiknketi lellqalwlp
     1261 kklaivhcpg hqrgdssvar gnrladlsak eaalasvspv lavrlpdpgt mtlpdnpeyn
     1321 aksapilpek lgtellwkih nathlgakkm qdlvrtakiv ikdyrakiek iasdckacql
     1381 tnptktsgat kgarergtrp gaywevdfte vkpgqygyry llvfidtfsg wveayptkke
     1441 tahvvtkkll eeilprfgfp aqvgsdngpa fvskvsqgla avlgtnwklh cayrpqssgq
     1501 vermnrtlke tltkltletg gdwvallpfa lfrvrnspym fgltpfeimf grpppivpsl
     1561 ktdliadlpv dalfsslrll qrvhkdiwkr leaiyltkpp pephrfqpgd wvyvrrhhsg
     1621 tleprwkgpy svilvtptal kvdgistwvh fshvrpadaf tdlhevlpqw rvskhpdnpl
     1681 klklwkrpke asps
//
LOCUS       XP_061014223             460 aa            linear   MAM 02-DEC-2023
DEFINITION  MLV-related proviral Env polyprotein-like [Dama dama].
ACCESSION   XP_061014223
VERSION     XP_061014223.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158240.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..460
                     /product="MLV-related proviral Env polyprotein-like"
                     /calculated_mol_wt=51247
     Region          10..>459
                     /region_name="TLV_coat"
                     /note="ENV polyprotein (coat polyprotein); pfam00429"
                     /db_xref="CDD:306850"
     CDS             1..460
                     /gene="LOC133066840"
                     /coded_by="XM_061158240.1:1..1383"
                     /db_xref="GeneID:133066840"
ORIGIN      
        1 mwdsllwvtl gvlgvlekgg htyqnphqpf qvtwilknge tyeelnrtta tqpkdkwwpd
       61 lyfnltklie qsgyskcrvr slgfyacpgh qrqniktcgg mlsryckswg cvtssdgyrk
      121 wsvtrpdlin msftgplpks dwqgrpsnpg qcsdqirlsf tqqgrtenrw isrlywgivi
      181 ydtygmgsns atlyvqqvlq paqthvmgpn qiitpprpsp qgtnaanvvt sptptpslql
      241 tqtdppetqe plwalikety galnhsnpna tqscwlcyts hppyyeavgl natynlstls
      301 nppqcswgdr kvgltmkqvw gsgtclgtvp tdkqtlcaqt dndtnftdkt yiipeiggww
      361 vcsrtgltpc lhlavfdqsr efcvmvavvp kityhpeevl ynfwdqdtpa prhkrehvta
      421 itlatlfalg aagtgtgias lttqhqglit lrvavdedia
//
LOCUS       XP_061014225             831 aa            linear   MAM 02-DEC-2023
DEFINITION  cytosolic phospholipase A2 epsilon [Dama dama].
ACCESSION   XP_061014225
VERSION     XP_061014225.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158242.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..831
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..831
                     /product="cytosolic phospholipase A2 epsilon"
                     /calculated_mol_wt=95237
     Region          40..148
                     /region_name="C2_cPLA2"
                     /note="C2 domain present in cytosolic PhosphoLipase A2
                     (cPLA2); cd04036"
                     /db_xref="CDD:176001"
     Site            order(58,61,83,111,113)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176001"
     Region          180..285
                     /region_name="cPLA2_C2"
                     /note="Cytosolic phospholipases A2 C2-domain; pfam18695"
                     /db_xref="CDD:465834"
     Region          284..826
                     /region_name="cPLA2_Grp-IVB-IVD-IVE-IVF"
                     /note="Group IVB, IVD, IVE, and IVF cytosolic
                     phospholipase A2; catalytic domain; Ca-dependent; cd07201"
                     /db_xref="CDD:132840"
     Site            order(345..346,348,376,664)
                     /site_type="active"
                     /db_xref="CDD:132840"
     Site            374..378
                     /site_type="other"
                     /note="nucleophile elbow"
                     /db_xref="CDD:132840"
     Site            order(551,616)
                     /site_type="other"
                     /note="flexible lid region"
                     /db_xref="CDD:132840"
     CDS             1..831
                     /gene="PLA2G4E"
                     /coded_by="XM_061158242.1:1..2496"
                     /db_xref="GeneID:133066841"
ORIGIN      
        1 mlqkqmpvwv shyppdscqe dgdrpaatca leeglspchl ltvrvirmkn vrqadvvslt
       61 dcfvslwlpt asqkrlrtrt isncrnpewn etfsfqiqsq vknvlelsvc dedtvtpddh
      121 lltvlydltk lcfrkkthvk fplntegmee levefllees psppeslitn gvlvsrqmsc
      181 levcaesrrp kkrkkkdllv tvtesfehtq rispglepcg tnlayfqypk hfqpevhvel
      241 pkspwicelc cctrqkdpvc qslhclpdge avtlpvnenc elhmkstpcs qaldvrlgfs
      301 lcqaeleflq krrvvvaqal kevlqleedl radevpliai matgggtrsm tamyghllal
      361 qklnilncas yitglsgatw tmatlyrdpd wssknlehai fearrhavkd kmpalfpdql
      421 lkfqeelqqr rqegykvtft dfwgllieac lgderneckl sdqraalcqg qnplpiylti
      481 nvkddvsnqd frewfefspy evgmqkfgaf iptelfgsef fmgrlmkrip esrmcymlgl
      541 wssifslnll dawnlshtse effhkwtrdr vhdiedepll peipkcdanv ldttvvtpas
      601 wlsntfrdil thrafvskfh nfllglqpha dylqnsqfsm wkdtvldgfp nqlttsvkhl
      661 clldtaffvn ssyapllrpe rkadliihln ycagsqtkpm kqtceycavq nipflkyelq
      721 qeeenlkecy llensqepdt pvvtffplic dtfqnykapg verspeeleq gqvdiygpkt
      781 pyatkeltyt eaafdklvkl seynilnnkd kllqalrlav erkrqksqcp l
//
LOCUS       XP_061014226             320 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: leukocyte tyrosine kinase receptor [Dama
            dama].
ACCESSION   XP_061014226
VERSION     XP_061014226.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158243.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 47% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..320
                     /product="LOW QUALITY PROTEIN: leukocyte tyrosine kinase
                     receptor"
                     /calculated_mol_wt=32907
     CDS             1..320
                     /gene="LTK"
                     /coded_by="XM_061158243.1:1..963"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:133066844"
ORIGIN      
        1 mgalqdgprc caqvihwekl sgeekhggal allhlhgqel awaltsssvv vtvgapgtls
       61 scggqaedqw srtrdsepaf rrisahgasg skgaknhlsl ahgifvsavf slgcgravlg
      121 rgglsgrkqs gssaperelg rgraaeeraa tngiegvpgs wcwagggggg ggatcvfrlr
      181 tgeprpllva aaggsraylk rqdrgxaqtt vqkldsrsva prsswrggea gsdasetdip
      241 wtdeesavfv ihpnsefclq llageawpsl vldaapgayg gflsqfhsaq lnplppsesl
      301 mhpespasil lpavvnygsq
//
LOCUS       XP_061014227             124 aa            linear   MAM 02-DEC-2023
DEFINITION  adenosine 5'-monophosphoramidase HINT1-like [Dama dama].
ACCESSION   XP_061014227
VERSION     XP_061014227.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158244.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..124
                     /product="adenosine 5'-monophosphoramidase HINT1-like"
                     /calculated_mol_wt=13572
     Region          14..116
                     /region_name="PKCI_related"
                     /note="Protein Kinase C Interacting protein related
                     (PKCI): PKCI and related proteins belong to the ubiquitous
                     HIT family of hydrolases that act on alpha-phosphates of
                     ribonucleotides. The members of this subgroup have a
                     conserved HxHxHxx motif (x is a...; cd01276"
                     /db_xref="CDD:238607"
     Site            order(39,41..42,49,51,97,104,106,110,112)
                     /site_type="active"
                     /note="nucleotide binding site/active site [active]"
                     /db_xref="CDD:238607"
     Site            order(108,110,112..114)
                     /site_type="active"
                     /note="HIT family signature motif [active]"
                     /db_xref="CDD:238607"
     Site            110
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:238607"
     CDS             1..124
                     /gene="LOC133066845"
                     /coded_by="XM_061158244.1:1..375"
                     /db_xref="GeneID:133066845"
ORIGIN      
        1 meitkaqvtw pggdmifrki ickeipakvi yeadqclafh dispqapthf lvipkkhisq
       61 isaaedddes llghlmivgk kcaadlglkk gcrmvvnegs dgdqsvyhvh lhvlggwqmn
      121 wppg
//
LOCUS       XP_061014228             575 aa            linear   MAM 02-DEC-2023
DEFINITION  fibrous sheath-interacting protein 1 [Dama dama].
ACCESSION   XP_061014228
VERSION     XP_061014228.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158245.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..575
                     /product="fibrous sheath-interacting protein 1"
                     /calculated_mol_wt=65255
     Region          3..395
                     /region_name="FSIP1"
                     /note="FSIP1 family; pfam15554"
                     /db_xref="CDD:464764"
     CDS             1..575
                     /gene="FSIP1"
                     /coded_by="XM_061158245.1:1..1728"
                     /db_xref="GeneID:133066846"
ORIGIN      
        1 mdiikgnldg iskpasnsrt rpgsrssnas levlspepas fkvdtainln sgkeghsesn
       61 nteesrnsnd nkgesyseki klpeegsded lnlgqhqivp ecsdefelke ldsqlrdair
      121 kmkrldkilv krqyrekeik kqglemrikl weelksakng evlqsneeme ntkkflalta
      181 aseetvdpsc nkhedtffsv fhtqvppedy enhiqnvkqd ftydvernes mikaenkpfs
      241 ntekielrgk hsqdfikrni elaknlgkpv vmidrekekl vellkdlddt dsglsssegd
      301 qcgwlvpgeg ytlavtqhqq laeidtklqe lsatyptifs sspgpehqid eehdlngddr
      361 ktevtpgekv lrntkeqrdq qnrlreidek lrkmkenvld stsllseeql rclldecsfk
      421 qkstvrlspe reekdiedmi pefpqpsgsi lseslsrskt kvrstevedv nvpknvecet
      481 srgyfltkal aghhmspall leeenlkclq fsednvtsda edyfmsktlg igrlkrpsfl
      541 ddplyglsvs lssedqhvkl spperlkpge awrvh
//
LOCUS       XP_061014229            4872 aa            linear   MAM 02-DEC-2023
DEFINITION  ryanodine receptor 3 [Dama dama].
ACCESSION   XP_061014229
VERSION     XP_061014229.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158246.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4872
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..4872
                     /product="ryanodine receptor 3"
                     /calculated_mol_wt=552143
     Region          19..213
                     /region_name="Ins145_P3_rec"
                     /note="Inositol 1,4,5-trisphosphate/ryanodine receptor;
                     pfam08709"
                     /db_xref="CDD:462572"
     Region          217..406
                     /region_name="beta-trefoil_MIR_RyR3"
                     /note="MIR domain, beta-trefoil fold, found in ryanodine
                     receptor 3 (RyR3) and similar proteins; cd23292"
                     /db_xref="CDD:467763"
     Site            392
                     /site_type="other"
                     /note="putative homotetramer interface [polypeptide
                     binding]"
                     /db_xref="CDD:467763"
     Region          443..622
                     /region_name="RYDR_ITPR"
                     /note="RIH domain; pfam01365"
                     /db_xref="CDD:460175"
     Region          642..793
                     /region_name="SPRY1_RyR"
                     /note="SPRY domain 1 (SPRY1) of ryanodine receptor (RyR);
                     cd12877"
                     /db_xref="CDD:240457"
     Region          850..938
                     /region_name="RyR"
                     /note="RyR domain; pfam02026"
                     /db_xref="CDD:460419"
     Region          964..1053
                     /region_name="RyR"
                     /note="RyR domain; pfam02026"
                     /db_xref="CDD:460419"
     Region          1073..1205
                     /region_name="SPRY2_RyR"
                     /note="SPRY domain 2 (SPRY2) of ryanodine receptor (RyR);
                     cd12878"
                     /db_xref="CDD:240458"
     Region          1325..1463
                     /region_name="SPRY3_RyR"
                     /note="SPRY domain 3 (SPRY3) of ryanodine receptor (RyR);
                     cd12879"
                     /db_xref="CDD:293937"
     Region          2024..2234
                     /region_name="RYDR_ITPR"
                     /note="RIH domain; pfam01365"
                     /db_xref="CDD:460175"
     Region          2598..2687
                     /region_name="RyR"
                     /note="RyR domain; pfam02026"
                     /db_xref="CDD:460419"
     Region          2716..2799
                     /region_name="RyR"
                     /note="RyR domain; pfam02026"
                     /db_xref="CDD:460419"
     Region          3727..3844
                     /region_name="RIH_assoc"
                     /note="RyR and IP3R Homology associated; pfam08454"
                     /db_xref="CDD:462482"
     Region          3928..3983
                     /region_name="EF-hand_7"
                     /note="EF-hand domain pair; pfam13499"
                     /db_xref="CDD:463900"
     Region          4236..4506
                     /region_name="RR_TM4-6"
                     /note="Ryanodine Receptor TM 4-6; pfam06459"
                     /db_xref="CDD:461918"
     Region          <4623..4783
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     CDS             1..4872
                     /gene="RYR3"
                     /coded_by="XM_061158246.1:1..14619"
                     /db_xref="GeneID:133066847"
ORIGIN      
        1 mrwevvpcss hgslfpwqed evvlqcianv hkeqrkfcla aeglgnrlcf leptseakyv
       61 ppdlcvcnfv leqslsvral qemlantgen ggegaaqggg hrtllyghai llrhsfsgmy
      121 ltclttsrsq tdklafdvgl rehatgeacw wtihpaskqr segekvrigd dlilvsvsse
      181 rylhlsisng niqvdasfmq tlwnvhptcs gssveegyll gghvvrlfhg hdecltipst
      241 dqndsqhrri yyeaggagtr arslwrvepl riswsgsnir wgqafrlrhl ttghylalte
      301 dqglilqdrg ksdtkstafs fraskeikek ldsshkrdie gmgvpeikyg dsvcfvqhia
      361 sglwvtykaq daktsrlgpl krkvilhqeg hmddgltlqr cqreesqaar iirnttalfs
      421 qfvsgnsrta apvtvpieev lqtlhdliay fqppeegmqh egkqnklrsl knrqnlfkee
      481 gmlalvlnci drlniynsia hfagiarees gmawkeilnl lykllaalir gnrnncaqfs
      541 nnldwliskl drlesssgil evlhcilies pealnliaeg hiksiislld khgrnykvld
      601 vlcslclcdg vavranqnli cdnllprrnl llqtrlindv tsirpniflg vaegsaqykk
      661 wyfeliidqv dpfltaepth lrvgwasssg yapypgggeg wggngvgddl ysygfdglhl
      721 wsgriprava sinqhllksd dvvsccldlg apsisfring qpvqgmfenf ntdglffpvv
      781 sfsagvkvrf llggrhgefk flppsgyapc yeallpkekm rlepvkeykr daegvrdllg
      841 ttqflsqasf ipcpidtsqv vlpphlekir drlaenihel wgmnkielgw tfgkirddnk
      901 rqhpclvefs klpeteknyn lqmstetlkt llalgchiah vhpaaeddlk kvklpknymm
      961 sngykpapld lsdvkllppq eilvdklaen ahnvwakdri kqgwtygiqq dlknkrnprl
     1021 vpyslldert kksnrdslre avrtfvgygy niepsdqela dpavekvsid kirffrvers
     1081 yavrsgkwyf efevvtggdm rvgwarpgcr pdielgaddq afvfegsrgq rwhqgsgyfg
     1141 rtwqpgdvvg cminlddasm iftlngelli tnkgselafa dyeidsgfvp icslglsqig
     1201 rmnlgmdast fkfytmcglq egfepfavnm nrdvamwfsk rlptfvnvpk dhpqievvri
     1261 dgtldtppcl kvthktfgtq nssatmiycr lsvpvechas fshspcldsd afqkrkqmqe
     1321 ilsqtttqcy yairifagqd pscvwvgwvt pdyhlysekf dlnknctvtv tlgdergrvh
     1381 esvkrsncym vwggdivats qrasrsnvdl eigclvdlam gmlsfsangr elgtcyqvep
     1441 ntkvfpavfl qptstslfqf elgklknamp lsaaifksee knpvpqcppr ldvqtiqpvl
     1501 wsrmpssflk vetervserh gwvvqclepl qmmalhipee nrcvdilelc eqedlmrfhy
     1561 htlrlysalc algnsrvaya lcshvdlsql fyaidnkylp gllrsgfydl lisihlasak
     1621 erklmmkney iipitsatrk irlypdeskr hglpgvgprt clkpgfrfst pcfittneeh
     1681 qkqspeiple llktkalgml teavqcsgah irdpvggsve fqfvpvlkli gtllvmgvfd
     1741 dddvrqilll idpsvfgehs geteegaeke evtqveekav eagekasrea pikgllqtrl
     1801 pesvklqmce llsylcdcel qhrveaivaf gdiyvsklqe nqkfrynelm qalnmsaalt
     1861 arktrefrsp pqeqinmlln fqlgencpcp eeireelydf hedlllhcgv pleeeeveee
     1921 dtswtgkfca lvqrikgppk pekeqpteee erypttlkel isqtmirwaq edqiqdaelv
     1981 rmmfnllrrq ydsigellqa lrktytisqa svsdtislla algqirclls vrmgkeeell
     2041 minglgdimn nkvfyqhpnl mrvlgmhetv mevmvnvlgt eksqiafpkm vasccrflcy
     2101 fcrisrqnqk amfehlsyll enssvglasp smrgstpldv aassvmdnne lalgleepdl
     2161 ekvvtylagc glqscpmlla kgypdvgwnp iegerylsfl rfavfvnses veenasvvvk
     2221 llirrpecfg palrgeggng llaamqgaik isenpaldlp sqgykrevte ddedeeeivh
     2281 mgnaimsfys alidllgrca pemhliqtgk geairirsil rslvptedlv giisiplklp
     2341 slnkdgsvse pdmaanfcpd hkapmvlfld rvygikdqtf llhllevgfl pdlrasasld
     2401 tvslstteaa lalnryicsa vlplltrcap lfagtehyts lidstlqtiy rlskgrsltk
     2461 aqrdtieecl laicnhlrps mlqqllrrlv fdvpqlseyc kmplklltnh yeqcwkyycl
     2521 psgwgsygla veeelhltek lfwgifdsls hkkydpdlfr malpclsaia galppdyldt
     2581 risatlekqv svdadgnfdp kpintvnfsl pekleyivtk yaehshdkwa cdksqngwky
     2641 gisldenvkt hplirpfktl tekekeiyrw pareslktml avgwtvertk egealvqqre
     2701 neklrsvsqa sqgnsyspap ldlsnvvlsr elqgmvevva enyhniwakk kkleleskgg
     2761 gshpllvpyd tltakekfrd rekaqdlfkf lqvngivvsr gvkdmeldas smekrfaykf
     2821 lkkvlkyvds aqefiahlea ivssgkneks phdqeikffa kvllplvdqy ftnhrlyfls
     2881 splkplsssg yashkekemv aslfcklaal vrhrislfgs dsvtmvsclh ilaqtldtrt
     2941 vmksgselvk aglraffena aedlektlen lklgkfthsr tqikgvsqni nyttvallpi
     3001 ltsifehvaq hqfgvdlllg dvqiscyhil cslyslgtgk niyverqrpa lgeclaslaa
     3061 aipvaflept lnrynplsvf ntktprersi lgmpdtveem cpdipqlegl mkeindlaes
     3121 garytemphv ievilpmlcn ylsywwergp ehlppsagpw ctkvtsehls vilgnilkii
     3181 nnnlgideas wmkriavyaq piiskarpdl lkshfiptle klkkkavktv qeeeqlrads
     3241 kgdtqeaell ildefavlcr dlyafypmli ryvdnnrsnw lkspdadsdq lfrmvaeifi
     3301 lwckshnfkr eeqnfviqne innlafltgd skskmskamq vksggqdqer kktkrrgdfy
     3361 siqtslivaa lkkmlpigln mctpgdqeli slaksrysyk dtdeevkehl rnnlhlqeks
     3421 ddpavkwqln lykdvlksee psnpektver vqrisaavfh leqveqplrs kkavwhklls
     3481 kqrkravvac frmaplynlp rhrsinlflh gyqrfwiete eysfeeklvq dlakspkvee
     3541 eeeeevekqp dplhqiilhf srnaltersk leddplytsy asmmakscqs gedeeeeedk
     3601 ektfeekeme kqktlyqqar lhergaaemv lqmisaskge mspmvvetlk lgiailnggn
     3661 agvqqkmldy lkekkdagff qslsglmqsc svldlnafer qnkaeglgmv teegtlivre
     3721 rgekvlqnde ftrdlfrflq llceghnsdf qnflrtqmgn tttvnviist vdyllrlqes
     3781 isdfywyysg kdiidesgqh nfskalavtk qifnslteyi qgpcignqqs lahsrlwdav
     3841 vgflhvfanm qmklsqdssq iellkelldl lqdmvvmlls llegnvvngt igkqmvdtlv
     3901 esstnvemil kffdmflklk dltssdtfke ydpdgkgiis kkefqkameg qkqytqseid
     3961 fllscaeade ndmfnyidfv drfhepakdi gfnvavlltn lsehmpndsr lkclldpaes
     4021 vlnyfepylg rieimggakk iervyfeise ssrtqwekpq vkeskrqfif dvvneggeqe
     4081 kmelfvnfce dtifemqlas qisesdsadr pdeeeeedgd ssyvlevege eeeeeksfec
     4141 asafamacas vkrnvanflk ratlknlrkq yrkvkkmtfk ellkvffsff wtlfvglfhl
     4201 lftivggiiq vlwstvfggg liegaknirv tkilgdmpdp tqfgihddam eaeraevpep
     4261 gittelvhfv kgekgdadim sdlfglhpkk egglkhgpev glgdlseiig kdetptlest
     4321 vrkkrkaqaa emkaaheteg kiesekadme dgekedtake eeqaealwad vtkrkkrrcg
     4381 qkvekpeaft anffkgleiy qtkllhylar nfynlrflal fvafainfil lfykvteepl
     4441 eeetedvanl wnsfndeeee eavvffvlqe stgymaptlr alavihtvis lvcvvgyycl
     4501 kvplvvfkre keiarklefd glyiteqpse ddikgqwdrl vintpsfpnn ywdkfvkrkv
     4561 inkygdlyga eriaellgld knaldfspve etkaeaaslv swlssidmky hvwklgvvft
     4621 dnsflylawy ttmsvlghyn nfffaahlld iamgfktlrt ilssvthngk qlvltvglla
     4681 vvvylytvva fnffrkfynk sedddepdmk cddmmtcylf hmyvgvragg gigdeiedpa
     4741 gdpyemyriv fditffffvi villaiiqgl iidafgelrd qqeqvredme tkcficgign
     4801 dyfdttphgf ethtlqehnl anylfflmyl inkdetehtg qesyvwkmyq ercwdffpag
     4861 dcfrkqyedq lg
//
LOCUS       XP_061014230             474 aa            linear   MAM 02-DEC-2023
DEFINITION  cell death regulator Aven [Dama dama].
ACCESSION   XP_061014230
VERSION     XP_061014230.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158247.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 16% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..474
                     /product="cell death regulator Aven"
                     /calculated_mol_wt=49667
     CDS             1..474
                     /gene="AVEN"
                     /coded_by="XM_061158247.1:1..1425"
                     /db_xref="GeneID:133066849"
ORIGIN      
        1 mvaccslrls pegpplpssy lflnsefsdh pcpaaptgqa splnprpsrs papapparpq
       61 gspapaaaaa gfhsrprtpr sptprpgarg ssvgpvsgga raslrrprsr alsiaggsrm
      121 qaergarggr grrpgrgrpg gdrdreraga gtavargggg dgggrrgrgr gfrggrggrg
      181 ggaprggrre pggrgartse pieddsdaet ygeeneeqgn yskrkivsnw dryqdtekev
      241 dnesgesqrg tdfsvllssa gdsfsqfrfa eekewdgeas cpkqnsafyv dceslvralh
      301 elplslrlnv aaelvqtalp lelpqvkpkr nndgkglgmq lkgpsgpggk gspsemistt
      361 agfpmypgkd gpgsgpskgs qnptsllqla adhleeeldl llnldapvke ggdifsdqta
      421 qdlesekgge vvheeaepan psvleeknva sgqpsisrnv teeeledwld smis
//
LOCUS       XP_061014231              77 aa            linear   MAM 02-DEC-2023
DEFINITION  metallothionein-1B-like [Dama dama].
ACCESSION   XP_061014231
VERSION     XP_061014231.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158248.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 23% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..77
                     /product="metallothionein-1B-like"
                     /calculated_mol_wt=7969
     Region          20..76
                     /region_name="Metallothio"
                     /note="Metallothionein; pfam00131"
                     /db_xref="CDD:395080"
     CDS             1..77
                     /gene="LOC133066850"
                     /coded_by="XM_061158248.1:1..234"
                     /db_xref="GeneID:133066850"
ORIGIN      
        1 mffytcfgpr ispffqvdpn cscpmdgscs cagsctckvc rcpsckkgcc sccpvgcakr
       61 aqgcickgas dkcncct
//
LOCUS       XP_061014232             321 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4F3/4F16/4F29-like [Dama dama].
ACCESSION   XP_061014232
VERSION     XP_061014232.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158249.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..321
                     /product="olfactory receptor 4F3/4F16/4F29-like"
                     /calculated_mol_wt=36174
     Region          25..291
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320354"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..321
                     /gene="LOC133066851"
                     /coded_by="XM_061158249.1:1..966"
                     /db_xref="GeneID:133066851"
ORIGIN      
        1 mdggnrsvvs efllqgltss weiqillflf ftvfyiasml gnllivltil sdhhlhspmy
       61 fllanlsfid tgvssiatpk misdlfrrhk vislrgcitq mffihtvgga emvllivmay
      121 drylaickpl hyltimslrv ctsllavawt iglihsvaql afvvnlpfcg pnemdsfycd
      181 fprfiklact dtyrleflvt ansgfismgt flilivsyif ilftvrkhss ggsskalstl
      241 sahitvvvff fgpciivyvw pfptlpidkf laifdalitp fmnpiiytlr nkemkmamrr
      301 lfgkvlslkk sffmhsprns d
//
LOCUS       XP_061014234             328 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4F3/4F16/4F29-like [Dama dama].
ACCESSION   XP_061014234
VERSION     XP_061014234.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158251.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..328
                     /product="olfactory receptor 4F3/4F16/4F29-like"
                     /calculated_mol_wt=36975
     Region          25..291
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320354"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..328
                     /gene="LOC133066852"
                     /coded_by="XM_061158251.1:1..987"
                     /db_xref="GeneID:133066852"
ORIGIN      
        1 mdggnrsvvs efllqgltss weiqillflf ftvfyiasml gnllivltil sdhhlhspmy
       61 fllanlsfid tgvssiatpk misdlfrrhk vislrgcitq mffihtvgga emvlltvmay
      121 drylaickpl hyltimslrv ctsllavawt iglihsvaql afvvnlpfcg pnemdsfycd
      181 fprfiklact dtyrleflvt ansgfismgt flilivsyif ilftvrkhss ggsskalstl
      241 sahitvvvff fgpciivyvw pfptlpidkf laifdvlitp fmnpiiytfr nkemkmamrr
      301 lfgkvlsfrk sshaqskkfr liltilgn
//
LOCUS       XP_061014235             313 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4F3/4F16/4F29-like [Dama dama].
ACCESSION   XP_061014235
VERSION     XP_061014235.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158252.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..313
                     /product="olfactory receptor 4F3/4F16/4F29-like"
                     /calculated_mol_wt=35351
     Region          25..291
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320354"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..313
                     /gene="LOC133066854"
                     /coded_by="XM_061158252.1:1..942"
                     /db_xref="GeneID:133066854"
ORIGIN      
        1 myganqsmvs efvflgltns weiqlllfvf sssfyiastm gnllimltvi sdprlhssmy
       61 fllanlsfid lgfstvfspk miydlfrkhk visfsgcitq iffihiiggv evvlliamaf
      121 dryvaickpl hyltimsprm ciffivaawm iglihsmvql acvvnlpfcg pnvldsfycd
      181 lpqliklaci dtyelefmvt ansgfisvgs ffiliisyiv iiltvqkqss vgsskalstl
      241 sahitvvvlf fgplmffyiw pfssthlgkf laifdavltp flnpviytfr nhemrvamrr
      301 vckqlvsyrr slk
//
LOCUS       XP_061014236             318 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4F3/4F16/4F29-like [Dama dama].
ACCESSION   XP_061014236
VERSION     XP_061014236.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158253.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..318
                     /product="olfactory receptor 4F3/4F16/4F29-like"
                     /calculated_mol_wt=35705
     Region          25..291
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320354"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..318
                     /gene="LOC133066855"
                     /coded_by="XM_061158253.1:1..957"
                     /db_xref="GeneID:133066855"
ORIGIN      
        1 mdeanqsvvs efvllgltns weiqlllfvf sstlcvasmm gnsliiltvt cdphlhspmy
       61 fllanlsfid lgvssvtspk miydlfrkhk visfrgciaq iffihivggv emvlliamaf
      121 dryvaicrpl pyltimnprm cisflvaawi igfihsmvql pfvvnlpfcg pnvldsfycd
      181 lprliklaci dtyqlefmvm ansgfisigs ifiliisyiv iiltvqkhss gssskalstl
      241 sahitavalf fgplifiytw pfpsthldkf laifyavltp flnpviytfr nqemkvamrr
      301 vcrqlvsyrk ttlvmpvl
//
LOCUS       XP_061014237             324 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4F3/4F16/4F29-like [Dama dama].
ACCESSION   XP_061014237
VERSION     XP_061014237.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158254.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..324
                     /product="olfactory receptor 4F3/4F16/4F29-like"
                     /calculated_mol_wt=36581
     Region          37..303
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          38..64
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320354"
     Region          71..97
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(93,96..97,109..114,116..117,120,165,167..171,207,
                     210..212,214..216,218..219,263,266..267,269..270,273,
                     277..278,280..282,285,288..289)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          109..139
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          152..173
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          207..237
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          243..273
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          278..303
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..324
                     /gene="LOC133066856"
                     /coded_by="XM_061158254.1:1..975"
                     /db_xref="GeneID:133066856"
ORIGIN      
        1 msfliniltd ksihgmnhsm vsefvflglt nsweiqlllf mfssvfymas mlgnslivlt
       61 vmmnphlhsp myfllanlsi tdlgvssvis pkmiydifrk rkvisfggci aqiffihiig
      121 gvemvlliam afdryvaick plhyftimsr kvcllllvta wiigfihsvv qlgfvvklpi
      181 cgpniidsfy cdfprfikla ctdtfrlesm vtansgfisl gsffilivsy ifilitvrkh
      241 ssgssskals tlsthvmvvi lffgpcifvy iwphstshld kflvvfdavl tpflnsviyt
      301 lrnkemkvam kkvcsqfiiy rris
//
LOCUS       XP_061014238             314 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4F15-like [Dama dama].
ACCESSION   XP_061014238
VERSION     XP_061014238.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158255.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..314
                     /product="olfactory receptor 4F15-like"
                     /calculated_mol_wt=35195
     Region          25..291
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320354"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..314
                     /gene="LOC133066857"
                     /coded_by="XM_061158255.1:31..975"
                     /db_xref="GeneID:133066857"
ORIGIN      
        1 msggnhsvvs efvllglsss weiqlllfwf sclfymssmt gnllivvtvm sdpylhspmy
       61 fllanlsiid lifcsiaapk micdlfrkqk visfrgciaq iffshavggt emvlliamaf
      121 dryvaickpl hyltimsprm cifilvvagt iglthsltql afvvhlpfcg pnvldsfycd
      181 lpqliklact dtyklkfmvt ansgfislga ffllilsyvf ilvtlqkhps gasskalstl
      241 sahiivvilf fgpliffyls pspsthldkf laifdavltp flnpviytlr nremkmamrr
      301 mfcqlmtfrq kitr
//
LOCUS       XP_061014239             331 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4F3/4F16/4F29-like [Dama dama].
ACCESSION   XP_061014239
VERSION     XP_061014239.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158256.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..331
                     /product="olfactory receptor 4F3/4F16/4F29-like"
                     /calculated_mol_wt=37159
     Region          26..291
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320354"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..331
                     /gene="LOC133066858"
                     /coded_by="XM_061158256.1:1..996"
                     /db_xref="GeneID:133066858"
ORIGIN      
        1 mgganhsmvs efvflglsns weiqfllvlf fsvfymaslm gnllvvfsvs adtslhspmy
       61 fllanlsfld mgfcsttapk miydlfrkck aisfggcltq iffihafggt emvlliamaf
      121 dryvaickpl hyltimnprm caltlaaawv lglihsvaql afvidlpfcg pnvldsfycd
      181 lprliklact etyrlefmvt tnsglisvgf ffiliisyvf ilvtvwkyss gsvskalstl
      241 sahvtvvvlf fgpliffytw pfssshldkf laisdavltp flnpviytfr nkemkaamkk
      301 lchqlvsyrk iiknlntakp kyyiffstis f
//
LOCUS       XP_061014240             329 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4F4 [Dama dama].
ACCESSION   XP_061014240
VERSION     XP_061014240.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158257.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..329
                     /product="olfactory receptor 4F4"
                     /calculated_mol_wt=36845
     Region          58..308
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          76..102
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(98,101..102,114..119,121..122,125,170,172..176,212,
                     215..217,219..221,223..224,268,271..272,274..275,278,
                     282..283,285..287,290,293..294)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          114..144
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          157..178
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          212..242
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          248..278
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          283..308
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..329
                     /gene="LOC133066860"
                     /coded_by="XM_061158257.1:1..990"
                     /db_xref="GeneID:133066860"
ORIGIN      
        1 migniqvtte diswnesise tnhstvtefi flglsnsqel qifllvfffv fyvgivfgnl
       61 livitvtsds hlhspmyfll anlslidlcl ssvtapkmia dffskckvis fkgclaqifl
      121 lhffggselv iliamafdry vaickplryt timrgnvcvg fvaaawgtgf lhsvsqlafa
      181 vnlpfcgpne vdsfycdlpr viklactdsy rldimvians gvltvcsffl liisytvilv
      241 tiqhlpsers skalstltah itvvllffgp ciftyawpfp iksldkflav fysvvtpfln
      301 piiytlrnkd mkiamrwlrk wsinsriks
//
LOCUS       XP_061014241             311 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4F15-like [Dama dama].
ACCESSION   XP_061014241
VERSION     XP_061014241.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158258.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..311
                     /product="olfactory receptor 4F15-like"
                     /calculated_mol_wt=34916
     Region          25..291
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320354"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..311
                     /gene="LOC133066861"
                     /coded_by="XM_061158258.1:1..936"
                     /db_xref="GeneID:133066861"
ORIGIN      
        1 mgglndsmvn efvllalscs wekrlflili csllylgvil gnlfilflvi fdshlhspmy
       61 fllanlslid vglssttvpk iitdllnddk iipfqscmtq icfihtiggv emvlliamaf
      121 drctaickpl hylkimnpki cvsfvitgwv igvihamsqf lfviklpfcg pnevdsfycd
      181 fpkiiklact dgaklefivt ansgfmsmgt ffllilsysf ilvtvwkrss gdlskafvtl
      241 sshitvvflf ftpcmflyvw pspppsldkn lfivdfaitp vlnpaiytlr nkdikvaikr
      301 llkkifysrf c
//
LOCUS       XP_061014242             311 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4F21-like [Dama dama].
ACCESSION   XP_061014242
VERSION     XP_061014242.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158259.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..311
                     /product="olfactory receptor 4F21-like"
                     /calculated_mol_wt=34895
     Region          25..291
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320354"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..311
                     /gene="LOC133066862"
                     /coded_by="XM_061158259.1:1..936"
                     /db_xref="GeneID:133066862"
ORIGIN      
        1 mgrqndsvvs efvllgfsss weaalflmli fsllylgtil gnlfilflvi ldshlhspmh
       61 fllanlslid vglssttvpk mitdlpnkyk iisfkscmtq icfihimggv emvlliamaf
      121 drytaickpl hylnimnpki cisfvitgwv agvihamsqf afiinlpfcg pnkadsfycd
      181 fpriiklact dgakfefiva ansgfmsmgt ffllivsyvf ilvtvwkrss gdlskasvtl
      241 sahitvvvlf ftpcmflyvw pfpkssvdky lfivdfvitp ilnpsiytlr nkdikvaikr
      301 lnkeghyvrf c
//
LOCUS       XP_061014243             303 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4K15-like [Dama dama].
ACCESSION   XP_061014243
VERSION     XP_061014243.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158260.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..303
                     /product="olfactory receptor 4K15-like"
                     /calculated_mol_wt=33957
     Region          26..291
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320354"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..303
                     /gene="LOC133066863"
                     /coded_by="XM_061158260.1:1..912"
                     /db_xref="GeneID:133066863"
ORIGIN      
        1 meeanqsmvs efifhglcns relqkfllls fsalylvtvl gnlfimllii tdshlhfpmy
       61 fllanlsfvd fclssvttpk lttdflkdnk tisfggcmsq ilcvhffggg emvllvtmay
      121 dryvaickpl hyssimnrqk ciglvltswi tgfvhatsql aiildlpfcg privdsffcd
      181 iplviklacm dthtlrllin adsavlattc filllisyty ilvtvclrsk dgaskalstc
      241 tshitvvvlf frpciftylw ppsiswvdkf lavfytvitp llnpaiytlr nkeiknaikr
      301 lts
//
LOCUS       XP_061014244             310 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4F21-like [Dama dama].
ACCESSION   XP_061014244
VERSION     XP_061014244.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158261.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..310
                     /product="olfactory receptor 4F21-like"
                     /calculated_mol_wt=34915
     Region          26..291
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320354"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..310
                     /gene="LOC133066865"
                     /coded_by="XM_061158261.1:1..933"
                     /db_xref="GeneID:133066865"
ORIGIN      
        1 mdgtndsvvs efvllglsgs yemkvfltli fsliylgiil gnlfilflvi fdshlhspmy
       61 fllanlsfid vgvasttvpk mitdllneyk iisfqgcmaq icfihimggv emvlliamaf
      121 drytaickpl yylkimnpki cislvitgwv igmihamsqf afiinlpfcg pnkvdsfycd
      181 fpriiklact dgakfefiva ansgfmsmgt ffllivsyif ilvtvwkrss gdlskasvtl
      241 sahitvvvlf ftpciflyvw pfptssvdky lfiadfaltp vlnpiiytlr nkeikvaikr
      301 likrhyvrfr
//
LOCUS       XP_061014245             334 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4F17-like, partial [Dama dama].
ACCESSION   XP_061014245
VERSION     XP_061014245.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158262.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..>334
                     /product="olfactory receptor 4F17-like"
     Region          52..317
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          52..78
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320354"
     Region          85..111
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(107,110..111,123..128,130..131,134,179,181..185,221,
                     224..226,228..230,232..233,277,280..281,283..284,287,
                     291..292,294..296,299,302..303)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          123..153
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          166..187
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          221..251
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          257..287
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          292..317
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..334
                     /gene="LOC133066866"
                     /coded_by="XM_061158262.1:1..>1002"
                     /db_xref="GeneID:133066866"
ORIGIN      
        1 menalswgkn vvkygvslik leetelngrs nqsvvsefif lglcnswelq afllvifssl
       61 ylitilgnif ivllitadlh lhcpmyflla nlsfidlcls svttpkmitd flkanksisf
      121 gscmcqiffg hffggcemvl lvsmaydryv aickplhyss imntqmcirl vmtswtigfv
      181 hsisqlaiii qlpfcgprel dsffcdiplv iklacmdtyi lemlinadsg vlaticfill
      241 lisysyillt lchqskdgas kalstctahi tvvvlffgpc ifiylfplni twvdkflavf
      301 yaaitpllnp viytlrnkei rnaikevrkv dsss
//
LOCUS       XP_061014246             324 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4K13-like [Dama dama].
ACCESSION   XP_061014246
VERSION     XP_061014246.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158263.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..324
                     /product="olfactory receptor 4K13-like"
                     /calculated_mol_wt=36643
     Region          36..292
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          60..86
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(82,85..86,98..103,105..106,109,154,156..160,196,
                     199..201,203..205,207..208,252,255..256,258..259,262,
                     266..267,269..271,274,277..278)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          98..128
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          141..162
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          196..226
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          267..292
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..324
                     /gene="LOC133066869"
                     /coded_by="XM_061158263.1:1..975"
                     /db_xref="GeneID:133066869"
ORIGIN      
        1 mdllnnrssv sefilvglsa sqetqifffa iffliyvaii vgnllivisv ivdnhlhspm
       61 yfflanlsff dlclssaatp kgisdflrkh ktiswwgcmi qmffmhffgg gemslliama
      121 idryvaickp lhyktimshr vligflllsw viglthttsq mvftvnlpfc gpnvldsffc
      181 dlplviklac tdtytlellv ivnsgflsli cfllllisya vmlvtiwqrs ssasskalst
      241 lyahitvvtl ffgpaifiya fpfnrycvdk flsvfysvit pllnpiiytl rnqemkaaik
      301 rlrgrrilpa qlyftikdll yspp
//
LOCUS       XP_061014247             314 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4K13-like [Dama dama].
ACCESSION   XP_061014247
VERSION     XP_061014247.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158264.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..314
                     /product="olfactory receptor 4K13-like"
                     /calculated_mol_wt=35144
     Region          37..293
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          61..87
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(83,86..87,99..104,106..107,110,155,157..161,197,
                     200..202,204..206,208..209,253,256..257,259..260,263,
                     267..268,270..272,275,278..279)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          99..129
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          142..163
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          197..227
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          233..263
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          268..293
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..314
                     /gene="LOC133066871"
                     /coded_by="XM_061158264.1:1..945"
                     /db_xref="GeneID:133066871"
ORIGIN      
        1 mngspenrss vsefilvgls asqetqifff aiffliyvai ivgnllivis vivdnhlhsp
       61 myfflanlsf fdlclssaat pkgisdflrk hktiswwgcm iqmffmhffg ggemslliam
      121 aidryvaick plhyktimsh rvligfllls wviglthtts qmvftvnlpf cgpnvldsff
      181 cdlplvikla ctdtytlell vivnsgllsl icfllllisy avmlvtiwqr sssasskals
      241 tlsahitvvt lffgpaifiy afpfnsysvd kflsmfysii tpllnpiiyt lrnqemkaai
      301 krlsnqhigs wltp
//
LOCUS       XP_061014248             311 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4K13-like [Dama dama].
ACCESSION   XP_061014248
VERSION     XP_061014248.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158265.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..311
                     /product="olfactory receptor 4K13-like"
                     /calculated_mol_wt=34732
     Region          34..290
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          58..84
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(80,83..84,96..101,103..104,107,152,154..158,194,
                     197..199,201..203,205..206,250,253..254,256..257,260,
                     264..265,267..269,272,275..276)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          96..126
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          139..160
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          194..224
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          230..260
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          265..290
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..311
                     /gene="LOC133066872"
                     /coded_by="XM_061158265.1:1..936"
                     /db_xref="GeneID:133066872"
ORIGIN      
        1 mqhagssvse filvglsvsq etqifffaif fliyvaiivg nllivisviv dnhlhspmyf
       61 flanlsffdl clssaatpkg isdflrkhkt iswwgcmiqm ffmhffggge mslliamaid
      121 ryvvickplh yktimshrvl tgflllswvi glthttsqmv ftvnlpfcgp nvldnflcdl
      181 plviklactd tytlellviv nsgflslicf illlmsyavm lvtiwqrsss asskalstls
      241 ahitvvtlff gpaifiyafp fnsysvdkfl svfysvitpl lnpiiytlrn qemkaaikrl
      301 skhhtgaglt h
//
LOCUS       XP_061014250             312 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4K13 [Dama dama].
ACCESSION   XP_061014250
VERSION     XP_061014250.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158267.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..312
                     /product="olfactory receptor 4K13"
                     /calculated_mol_wt=35101
     Region          25..291
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320354"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..312
                     /gene="LOC133066874"
                     /coded_by="XM_061158267.1:1..939"
                     /db_xref="GeneID:133066874"
ORIGIN      
        1 mektnhsvvs efillglsks qnlqilfflg fsvvyggivl gnllilvtvi fdpclhtpmy
       61 fllinlscid milasfatpk mivdflrdrk tiswwgcysq mffmhllggs emmllvvmai
      121 dryvaickpl hymtimsprv ligllfssya vgfvhsssqm afmlnlpfcg pnvvdsffcd
      181 lplviklace dtyvlqllvi adsgllslvc fllllvsytv iiysvrqhta sgsskafstl
      241 sahitvvtlf fapcvfiyvw pfsrysidki lsvfytiftp llnpiiytlr nqevkaairk
      301 iktrhtnskh tl
//
LOCUS       XP_061014251             316 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 11H6-like [Dama dama].
ACCESSION   XP_061014251
VERSION     XP_061014251.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158268.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..316
                     /product="olfactory receptor 11H6-like"
                     /calculated_mol_wt=35688
     Region          23..292
                     /region_name="7tmA_OR11G-like"
                     /note="olfactory receptor OR11G and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15913"
                     /db_xref="CDD:320579"
     Region          24..50
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320579"
     Region          57..83
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320579"
     Site            order(79,82..83,95..100,102..103,106,151,153..157,193,
                     196..198,200..202,204..205,250,253..254,256..257,260,
                     266..267,269..271,274,277..278)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320579"
     Region          95..125
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320579"
     Region          138..159
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320579"
     Region          193..223
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320579"
     Region          230..260
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320579"
     Region          267..292
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320579"
     CDS             1..316
                     /gene="LOC133066875"
                     /coded_by="XM_061158268.1:1..951"
                     /db_xref="GeneID:133066875"
ORIGIN      
        1 msnvssvskf illgfpytwe irilcfsvfs gtyiltlign lciicavrcd hqlqtpmyil
       61 lanfsfleiw fitstvpnml anflsetnti sfsgcflqfy fffsmgttet lflsamafdr
      121 ylaicrplhy psvmtvqrci rmgaccwvcg flyfllpicl isqlpfccln kidhflcdpg
      181 pliklscvpa pvteiicaiy nsvlifstll fitssytlvi ravfrvpsae grhkafstcg
      241 shlsvvslfy gsimvvyvsp tagnpagiqk yvtlfysvlt plfnpliysl rnkemkealr
      301 klfktvrfrq rpgrnl
//
LOCUS       XP_061014252             337 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4K15 [Dama dama].
ACCESSION   XP_061014252
VERSION     XP_061014252.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158269.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..337
                     /product="olfactory receptor 4K15"
                     /calculated_mol_wt=37504
     Region          26..291
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320354"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..337
                     /gene="LOC133066877"
                     /coded_by="XM_061158269.1:40..1053"
                     /db_xref="GeneID:133066877"
ORIGIN      
        1 mnetnhsrvt efvllglsss qelqpflfli fsllylaill gnfliiltvs sdsrlhtpmy
       61 fllanlslid icvasfatpk miadflverk tisfeaclaq iffvhlfagg emvplvsmay
      121 dryvaickpl hyttvinwrv citlvlipwc vgfihttsql aftvnlpfcg pnqvdsffcd
      181 lplvtklact dtyvislliv adsgllslss flllvvsytv ilitvrsrss astakahstl
      241 tahitvvtlf fgpcifiyvw pfsgysidkv lavfytiftp ilnpviytlr nkemkaamsk
      301 lksrylksgr vsavirnvlf letkqiyrtv ittvacg
//
LOCUS       XP_061014253             329 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4K1-like [Dama dama].
ACCESSION   XP_061014253
VERSION     XP_061014253.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158270.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..329
                     /product="olfactory receptor 4K1-like"
                     /calculated_mol_wt=36685
     Region          42..308
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          43..69
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320354"
     Region          76..102
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(98,101..102,114..119,121..122,125,170,172..176,212,
                     215..217,219..221,223..224,268,271..272,274..275,278,
                     282..283,285..287,290,293..294)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          114..144
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          157..178
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          212..242
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          248..278
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          283..308
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..329
                     /gene="LOC133066878"
                     /coded_by="XM_061158270.1:1..990"
                     /db_xref="GeneID:133066878"
ORIGIN      
        1 mgqseggian lsspdsfngw snksvvtefi llglsssrel qlflffifsv fygaavlgni
       61 liiltvitds rlhspmyfll snlsfidvcq atfatpkmia dflsehktit fegcmsqiff
      121 lhvfggsemv llvamaydry iaickplhym timnrrvctv lvgvswaigi lhsashlvft
      181 vdlpfcgpnk vdnffcdlpl viklacldty vleilvltns gllslicfll llisytiila
      241 tvhrqasgrt skalstlsah itvvvlffgp lifiyiwpfe sftidkfisv fftvftplln
      301 pmiytlrnkd vkeamkklrn qhvgskeaf
//
LOCUS       XP_061014254             323 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4K15-like [Dama dama].
ACCESSION   XP_061014254
VERSION     XP_061014254.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158271.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..323
                     /product="olfactory receptor 4K15-like"
                     /calculated_mol_wt=36016
     Region          26..291
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320354"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..323
                     /gene="LOC133066880"
                     /coded_by="XM_061158271.1:1..972"
                     /db_xref="GeneID:133066880"
ORIGIN      
        1 mnqgnnsrva efvllglsss welqyfffml fnflyiiivl gnllivltvi sepalhtpmy
       61 imlsnlsild vflatyatpk mihdflhepk tisfegcmaq ifllhvfagg emvllvamay
      121 dryvaickpl hyatimnlck ctglvvgswv igvmhslsql aftvnlpfcg pnvvnsyycd
      181 ltlviklact dtyvpevlml ldsglmgvas fllllvsytv ilvtvqrrss mdmtkarstl
      241 tahiivvtlf fgpcifiyaw pfsnfpvdkv lsvfstvftp ilnpiiytlr nkevksamsk
      301 lktryvcsgl psqlsllrld vls
//
LOCUS       XP_061014255             312 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4S2-like [Dama dama].
ACCESSION   XP_061014255
VERSION     XP_061014255.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158272.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..312
                     /product="olfactory receptor 4S2-like"
                     /calculated_mol_wt=35020
     Region          33..289
                     /region_name="7tmA_OR4A-like"
                     /note="olfactory receptor 4A and related proteins, member
                     of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15939"
                     /db_xref="CDD:320605"
     Region          57..83
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320605"
     Site            order(79,82..83,95..100,102..103,106,151,153..157,193,
                     196..198,200..202,204..205,249,252..253,255..256,259,
                     263..264,266..268,271,274..275)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320605"
     Region          95..125
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320605"
     Region          138..159
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320605"
     Region          193..223
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320605"
     Region          229..259
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320605"
     Region          264..289
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320605"
     CDS             1..312
                     /gene="LOC133066882"
                     /coded_by="XM_061158272.1:1..939"
                     /db_xref="GeneID:133066882"
ORIGIN      
        1 mevvnnvtef mflglsqdpg tqlilfalfl lfytvtlrgn llillmvfsd prlhtpmyff
       61 lsnlsfvdva yssatapkmi adfvseekii sywgcvtqmf tfhffgcaei fvltvmavdr
      121 yaaicqplry ttvmsttact mlaslswlga lahsfvqtll tfqlpfcssq iidhyfcdvh
      181 pvlklacadt tlvntlvian sglvslgcfl illasytvil fslrkqsaeg rrkalstcgs
      241 hftvvtfffv pcifiylrps ttfpldkavs vfyttitpml npliytlrnk dvknamnrvw
      301 nhkvslkekq ka
//
LOCUS       XP_061014256             328 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: olfactory receptor 4Q3-like [Dama dama].
ACCESSION   XP_061014256
VERSION     XP_061014256.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158273.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 4% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..328
                     /product="LOW QUALITY PROTEIN: olfactory receptor
                     4Q3-like"
                     /calculated_mol_wt=37293
     Region          35..292
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          60..86
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(82,85..86,98..103,105..106,109,154,156..160,196,
                     199..201,203..205,207..208,252,255..256,258..259,262,
                     266..267,269..271,274,277..278)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          98..128
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          141..162
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          196..226
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          267..292
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..328
                     /gene="LOC133066883"
                     /coded_by="XM_061158273.1:16..1002"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:133066883"
ORIGIN      
        1 mekendskvt efvllglsss lelqlflfli fllfymaivl gnvlivvtvr adthllqspm
       61 yyflghlsfi dlclscvtvp kmlgdflweg kiisfsgcla qiyflhflga semflltama
      121 ydryvaicnp lhyltvmsrq lcfrmvfacw cggfvhsvtq vtliiqlpfc gpnrldnfyc
      181 dvpqvvklac tdtyvvevlm vsnsgllslv cflallfsya vilvtlrtrf rqgqnralst
      241 cashltvvsl ifgpcvfiyl rpfcsfsvdk vfsvfytvit pmlnpliytl rntdmktamk
      301 klrxktcdil lpcqrmnrer rfrkyils
//
LOCUS       XP_061014257             328 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 11G2-like [Dama dama].
ACCESSION   XP_061014257
VERSION     XP_061014257.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158274.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..328
                     /product="olfactory receptor 11G2-like"
                     /calculated_mol_wt=36800
     Region          29..298
                     /region_name="7tmA_OR11G-like"
                     /note="olfactory receptor OR11G and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15913"
                     /db_xref="CDD:320579"
     Region          30..56
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320579"
     Region          63..89
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320579"
     Site            order(85,88..89,101..106,108..109,112,157,159..163,199,
                     202..204,206..208,210..211,256,259..260,262..263,266,
                     272..273,275..277,280,283..284)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320579"
     Region          101..131
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320579"
     Region          144..165
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320579"
     Region          199..229
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320579"
     Region          236..266
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320579"
     Region          273..298
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320579"
     CDS             1..328
                     /gene="LOC133066884"
                     /coded_by="XM_061158274.1:1..987"
                     /db_xref="GeneID:133066884"
ORIGIN      
        1 mnisesasrs esvrefillg fpcsreiqvi lfmffsiiyl ltlmgngaii cavcwdqhlh
       61 tpmyillgnf afleiwyvns tvpntlinfl sdskaisftg cflqlyfffs mgstecffls
      121 amsfdryfai chplhyatvm tgrrcfslvi acwvcgflwy lvpvilisql pfcgpnaidh
      181 fvcdsgpllt lscapapmsk ltsytlssli illsflfili syalvllavl rlpsassrqk
      241 afstcgshla vvllfygtim vmhvspgssh ftslpkimtl fyamvtplin pliyslrnkd
      301 mkkalrkvle kfkislkvfg srhrrnvg
//
LOCUS       XP_061014259             338 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 11H4-like [Dama dama].
ACCESSION   XP_061014259
VERSION     XP_061014259.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158276.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..338
                     /product="olfactory receptor 11H4-like"
                     /calculated_mol_wt=38328
     Region          29..298
                     /region_name="7tmA_OR11G-like"
                     /note="olfactory receptor OR11G and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15913"
                     /db_xref="CDD:320579"
     Region          30..56
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320579"
     Region          63..89
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320579"
     Site            order(85,88..89,101..106,108..109,112,157,159..163,199,
                     202..204,206..208,210..211,256,259..260,262..263,266,
                     272..273,275..277,280,283..284)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320579"
     Region          101..131
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320579"
     Region          144..165
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320579"
     Region          199..229
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320579"
     Region          236..266
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320579"
     Region          273..298
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320579"
     CDS             1..338
                     /gene="LOC133066885"
                     /coded_by="XM_061158276.1:1..1017"
                     /db_xref="GeneID:133066885"
ORIGIN      
        1 mknprgnnrs dpvnefillg fpctwevqif lfslfsviyv ltltgnlcii cavwwdhhlh
       61 tpmyvllanf sflemwyvts tvpsmlanfl setktisfsg cflqfylffs tggtetlfls
      121 amafdrylai crplhyptvm tvqrcirmga ccwlcgflyf llpihlisql pfhclnkidh
      181 flcdsgplik lscvpapate iicatfnsvl ifstlifiis sytlviravl rvpsaegrhk
      241 afstcgshla vvslfygsim vvyvsptagn saeiqkyvtl syivltplfn pliyslrnke
      301 mkealrkllk tvrfsqkkel kqlvcypftp ftvkkfls
//
LOCUS       XP_061014260             314 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4K14-like [Dama dama].
ACCESSION   XP_061014260
VERSION     XP_061014260.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158277.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..314
                     /product="olfactory receptor 4K14-like"
                     /calculated_mol_wt=35431
     Region          26..291
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320354"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..314
                     /gene="LOC133066886"
                     /coded_by="XM_061158277.1:4..948"
                     /db_xref="GeneID:133066886"
ORIGIN      
        1 mdkrnvsvvs efmllglcqs wnkqvlllli ffmlyliivs gnivimilii tdshlhspmy
       61 fllanlsfvd mwlssvttpk mitdfvrenk tisfggcmcq ilfvhfvggg emvllvvmay
      121 dryvaickpl hystimnlqk ciglvvtswt igfvhavsqm vvivqlpfcg pkeidsffcd
      181 iplviklaci dsdnlgilmn adsgvlamtc filllisyty illtvrrssk agtsralstc
      241 tahitvvllf fgpcifiyvw plsitwvdkf lavfysvitp llnpaiytlr nkeiknalkr
      301 frsyylhskr hinv
//
LOCUS       XP_061014261             260 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 11H6-like [Dama dama].
ACCESSION   XP_061014261
VERSION     XP_061014261.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158278.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..260
                     /product="olfactory receptor 11H6-like"
                     /calculated_mol_wt=29147
     Region          1..236
                     /region_name="7tmA_OR11G-like"
                     /note="olfactory receptor OR11G and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15913"
                     /db_xref="CDD:320579"
     Region          1..27
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320579"
     Site            order(23,26..27,39..44,46..47,50,95,97..101,137,140..142,
                     144..146,148..149,194,197..198,200..201,204,210..211,
                     213..215,218,221..222)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320579"
     Region          39..69
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320579"
     Region          82..103
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320579"
     Region          137..167
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320579"
     Region          174..204
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320579"
     Region          211..236
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320579"
     CDS             1..260
                     /gene="LOC133066887"
                     /coded_by="XM_061158278.1:166..948"
                     /db_xref="GeneID:133066887"
ORIGIN      
        1 myillanfsf lemwyvsstv pnmlanflse tktisfsgcf lqfyfffsmg ttetfilsam
       61 afdrylaicr plhyttvmtv qrcirlgacc wlcgfscfll pvylisqlpf cgpntidhfl
      121 cdpgplmkls cvpapateii catfnsvlif stflfitssy tlviravlrv psaegrqkaf
      181 stcgshlavv slfygsimvm yvsptagnpa giqkmvtlfy svmtplfnpl iyslrnkemk
      241 ealrklirsa ifvqrkplkn
//
LOCUS       XP_061014262             318 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 11G2-like [Dama dama].
ACCESSION   XP_061014262
VERSION     XP_061014262.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158279.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..318
                     /product="olfactory receptor 11G2-like"
                     /calculated_mol_wt=35943
     Region          29..297
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          30..54
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          63..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          101..123
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          146..162
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          199..222
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          241..263
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          272..297
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..318
                     /gene="LOC133066888"
                     /coded_by="XM_061158279.1:1..957"
                     /db_xref="GeneID:133066888"
ORIGIN      
        1 mnvssretth svthfillgf psspemqcly fglfsaayil tltgntaivc avwwdqrlht
       61 pmyiflgnfs fleicyvttt vpnmlalfls ssksisfvsc faqfyfffsf gcdegfylci
      121 mafdrylaic rplhyprimt kelytglvif gwsggfilfv tpvvlisrlp fcnpniidhf
      181 icdpvplmml scsedtttql iystfnvifm igtflfilcs yalvilavir lpsaaskrka
      241 fstcashlav vilffgsvmv myvspgsghp vkrqkfitlf ysvitplcnp liyslrnkkm
      301 kaalmkvlrl dnmlikyk
//
LOCUS       XP_061014263             317 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 11G2-like [Dama dama].
ACCESSION   XP_061014263
VERSION     XP_061014263.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158280.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..317
                     /product="olfactory receptor 11G2-like"
                     /calculated_mol_wt=35523
     Region          29..297
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          30..54
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          63..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          101..123
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          146..162
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          199..222
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          241..263
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          272..297
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..317
                     /gene="LOC133066889"
                     /coded_by="XM_061158280.1:1..954"
                     /db_xref="GeneID:133066889"
ORIGIN      
        1 mnvssretth svthfillgf psspemqrly fglfsaayil tlmgntaivc avrwdqrlht
       61 pvyiflgnfs fleicyvttt vpnmlahfls ssksisfvgc faqfyfffsf gcdegfylci
      121 mafdrylaic hplhypcimt kdlytglvif gwsggfilfv tpvvlisrlp fcnpniidhf
      181 icdpvplmml scsedtttql iystfnavfm igtflfilcs yalvilavvr lpsaaskrka
      241 fstcashlav vilffgsvmv myvspgsghp vkeqkivtlf yavitplcnp liyslrnnem
      301 kaalrkvfwa eisvlkt
//
LOCUS       XP_061014264             320 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 11H6-like [Dama dama].
ACCESSION   XP_061014264
VERSION     XP_061014264.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158281.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..320
                     /product="olfactory receptor 11H6-like"
                     /calculated_mol_wt=35463
     Region          29..298
                     /region_name="7tmA_OR11G-like"
                     /note="olfactory receptor OR11G and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15913"
                     /db_xref="CDD:320579"
     Region          30..56
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320579"
     Region          63..89
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320579"
     Site            order(85,88..89,101..106,108..109,112,157,159..163,199,
                     202..204,206..208,210..211,256,259..260,262..263,266,
                     272..273,275..277,280,283..284)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320579"
     Region          101..131
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320579"
     Region          144..165
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320579"
     Region          199..229
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320579"
     Region          236..266
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320579"
     Region          273..298
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320579"
     CDS             1..320
                     /gene="LOC133066890"
                     /coded_by="XM_061158281.1:1..963"
                     /db_xref="GeneID:133066890"
ORIGIN      
        1 mhiseasnis gsvsefillg fpcrreiqil lsvmfsliyl ltllgntaii cavwssqklh
       61 tpmyillanf sfleicyvss dvpkmlanii sqtksisyag cllqfyfffs mcaaegyfls
      121 amsfdrflai crplhystim tyqlcarlvv fcwaggflsi lmpavlmsrv pfcgpnvidh
      181 ffcdlgplla lscapvpktt ltcatvssli ifitflyilg sytfvlravl rvpagsgrnk
      241 afstcashfl vvslfygsvm vmyvspgsrs hpgtqkfvtl fycmatpffn pliyslrnkd
      301 mkdalkkvlc aseiskntek
//
LOCUS       XP_061014265             311 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 11G2-like [Dama dama].
ACCESSION   XP_061014265
VERSION     XP_061014265.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158282.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..311
                     /product="olfactory receptor 11G2-like"
                     /calculated_mol_wt=34667
     Region          28..297
                     /region_name="7tmA_OR11G-like"
                     /note="olfactory receptor OR11G and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15913"
                     /db_xref="CDD:320579"
     Region          29..55
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320579"
     Region          62..88
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320579"
     Site            order(84,87..88,100..105,107..108,111,156,158..162,198,
                     201..203,205..207,209..210,255,258..259,261..262,265,
                     271..272,274..276,279,282..283)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320579"
     Region          100..130
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320579"
     Region          143..164
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320579"
     Region          198..228
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320579"
     Region          235..265
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320579"
     Region          272..297
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320579"
     CDS             1..311
                     /gene="LOC133066891"
                     /coded_by="XM_061158282.1:1..936"
                     /db_xref="GeneID:133066891"
ORIGIN      
        1 mrtletnisg svsefillgf pcrreiqifl fvlfsiiyfl ilmgnasiic avwssrklht
       61 pmyillanfs fleicyvssd vpqmlaniis qtksisyagc llqfyfffsm caaeglflsv
      121 msfdrflaic kplhypiimt rrlcvllvvf cwaggflcll tplilisqvp fcgpntvdhf
      181 lcdlapllal scapvsgirl vcgivsslii fltllyilgt yfcvltvvlq mssgsgrqka
      241 fstcashlav vslfygsvmv myvspgsgky pgiqkfvtlf yalatpffnp liynfrnkdm
      301 eealkkfsvf y
//
LOCUS       XP_061014266             323 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 11H6-like [Dama dama].
ACCESSION   XP_061014266
VERSION     XP_061014266.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158283.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..323
                     /product="olfactory receptor 11H6-like"
                     /calculated_mol_wt=36188
     Region          25..294
                     /region_name="7tmA_OR11G-like"
                     /note="olfactory receptor OR11G and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15913"
                     /db_xref="CDD:320579"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320579"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320579"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,252,255..256,258..259,262,
                     268..269,271..273,276,279..280)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320579"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320579"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320579"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320579"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320579"
     Region          269..294
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320579"
     CDS             1..323
                     /gene="LOC133066894"
                     /coded_by="XM_061158283.1:7..978"
                     /db_xref="GeneID:133066894"
ORIGIN      
        1 mnvsgvntvt efillsfpcs revqvllfvl fsvsyiltlm gngaivfavk ldhrlhtpmy
       61 tllanfsfle mcyinttvpn mlrnflseak tisftacflq fyfffsmgit etfllplmaf
      121 drylaicrpl hyptimssrl cinlvglcwv taflcypvpi yfitqlpfcg pniidhfvcd
      181 pgpllalsci papgielscs ilssliifit fffilwsytl vlravlrvps aagrrkafst
      241 cgshlavvsl fygtimmmyi sptsgnpagi qkivtllyss vtplvnpliy slrnkdmkia
      301 lrkiqmftkt gqskqelmse prs
//
LOCUS       XP_061014267             308 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 11H7-like [Dama dama].
ACCESSION   XP_061014267
VERSION     XP_061014267.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158284.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..308
                     /product="olfactory receptor 11H7-like"
                     /calculated_mol_wt=34535
     Region          26..294
                     /region_name="7tmA_OR11G-like"
                     /note="olfactory receptor OR11G and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15913"
                     /db_xref="CDD:320579"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320579"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320579"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,252,255..256,258..259,262,
                     268..269,271..273,276,279..280)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320579"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320579"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320579"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320579"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320579"
     Region          269..294
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320579"
     CDS             1..308
                     /gene="LOC133066896"
                     /coded_by="XM_061158284.1:19..945"
                     /db_xref="GeneID:133066896"
ORIGIN      
        1 mnnsaastvt efillgfpgc qelqyflfsl ffgiyifttv gngtivcavr wdqrlhtpmy
       61 illgnfafle iwyitstvps mlinflsetk tisfvgcflq lyfftslgtt etyllcimay
      121 drylaicrpl hyptimtqql cyvllslcwv fgflsysvst vqlsrlpfcg pntidhfvcd
      181 idplmalscv papvtetvfy vlssliimlt llyilgsytl llitvfkvps aagrqkafst
      241 cgshltmvcl ffgallamyv sptadnpaei qkiitlfysv vtpflnpliy slrnkdmkaa
      301 lnkvlkie
//
LOCUS       XP_061014268             329 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 11H6, partial [Dama dama].
ACCESSION   XP_061014268
VERSION     XP_061014268.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158285.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         <1..329
                     /product="olfactory receptor 11H6"
     Region          43..311
                     /region_name="7tmA_OR11G-like"
                     /note="olfactory receptor OR11G and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15913"
                     /db_xref="CDD:320579"
     Region          43..69
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320579"
     Region          76..102
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320579"
     Site            order(98,101..102,114..119,121..122,125,170,172..176,212,
                     215..217,219..221,223..224,269,272..273,275..276,279,
                     285..286,288..290,293,296..297)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320579"
     Region          114..144
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320579"
     Region          157..178
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320579"
     Region          212..242
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320579"
     Region          249..279
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320579"
     Region          286..311
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320579"
     CDS             1..329
                     /gene="LOC133066897"
                     /coded_by="XM_061158285.1:<1..990"
                     /db_xref="GeneID:133066897"
ORIGIN      
        1 srlfiallts vsltalgsqn ktmhfvtefv llgfpgerem qmfffslilv vylltllgng
       61 aivcavkwdr rlhtpmyifl gnfafleiwy vsstvpnmlv nilsdtktis ftgcfiqfyf
      121 ffslgttecf flsvmaydry laiccpvhyp simtgkfcvi lvcvcwvsgf lcypvpivli
      181 sqlpfcepni inhfvcdpgp lfalacipap stelicytfn sviifgpfls ilgsytlvlr
      241 avlrfpshag rtkafstcgs hlmvvslfyg tlmvmyvspt sgnpagmqkv itlvysavtp
      301 llnpliyslr nkdmkdalkk vlglrinqn
//
LOCUS       XP_061014269             331 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 6S1 [Dama dama].
ACCESSION   XP_061014269
VERSION     XP_061014269.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158286.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..331
                     /product="olfactory receptor 6S1"
                     /calculated_mol_wt=36339
     Region          29..297
                     /region_name="7tmA_OR6C-like"
                     /note="olfactory receptor subfamily 6C and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15912"
                     /db_xref="CDD:320578"
     Region          29..54
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320578"
     Region          61..87
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320578"
     Site            order(83,86..87,99..104,106..107,110,155,157..161,198,
                     201..203,205..207,209..210,255,258..259,261..262,265,
                     271..272,274..276,279,282..283)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320578"
     Region          99..129
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320578"
     Region          142..163
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320578"
     Region          198..228
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320578"
     Region          235..265
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320578"
     Region          272..297
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320578"
     CDS             1..331
                     /gene="LOC133066899"
                     /coded_by="XM_061158286.1:1..996"
                     /db_xref="GeneID:133066899"
ORIGIN      
        1 mapdgnqsss vtefilagfp nlnstkaelf svflliylls ltgnvlivgv vgadtrlqtp
       61 myfflgnlsc leilltsvii pkmlsnflsr qhtisfaaci tqfylyfflg aseflllavm
      121 svdrylaich plhypllmng avcfrvalac wvggllgvlg ptvavallpf cgqdavvqhf
      181 fcdsgpllrl actntkelee tdfvlaslvi isslmitavs yghivlavlr ipsasgrqka
      241 fstctshlmv vtlfygsavf lyvrpsqsds vdtnwavtvi ttfvtpllnp fiyalrneqv
      301 kqalkdmfkk aragywwhls laksfnkkiv r
//
LOCUS       XP_061014270             158 aa            linear   MAM 02-DEC-2023
DEFINITION  angiogenin-1-like [Dama dama].
ACCESSION   XP_061014270
VERSION     XP_061014270.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158287.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..158
                     /product="angiogenin-1-like"
                     /calculated_mol_wt=18055
     Region          26..143
                     /region_name="RNAse_Pc"
                     /note="Pancreatic ribonuclease; smart00092"
                     /db_xref="CDD:128403"
     Site            order(33..42,49,53,55..57,64,67..72,103,122,136)
                     /site_type="active"
                     /note="dimerization with domain swap [active]"
                     /db_xref="CDD:119387"
     Site            order(37,64,68,92,104,138..139)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:119387"
     Site            order(65,95,106,121,123,125..126,128)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:119387"
     CDS             1..158
                     /gene="LOC133066900"
                     /coded_by="XM_061158287.1:1..477"
                     /db_xref="GeneID:133066900"
ORIGIN      
        1 mvmvlsplfl vfmlglsltp ltlakddrry rhfltqhydr spkgrdnkyc emmmerrklt
       61 kpckgintfv hgnkndikdi ckdkngkpyr gnlrisksaf qvtickhkgg strppcyyka
      121 tkayrvivig cekgwpvhfd esfvpprkqs rtgsalps
//
LOCUS       XP_061014271             172 aa            linear   MAM 02-DEC-2023
DEFINITION  ribonuclease 8-like [Dama dama].
ACCESSION   XP_061014271
VERSION     XP_061014271.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158288.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..172
                     /product="ribonuclease 8-like"
                     /calculated_mol_wt=18931
     Region          34..135
                     /region_name="RnaseA"
                     /note="Pancreatic ribonuclease; pfam00074"
                     /db_xref="CDD:459661"
     Site            order(39..48,54,56..58,66,69..74,107,125)
                     /site_type="active"
                     /note="dimerization with domain swap [active]"
                     /db_xref="CDD:119387"
     Site            order(67,99,110,124,126,128..129,131)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:119387"
     CDS             1..172
                     /gene="LOC133066901"
                     /coded_by="XM_061158288.1:1..519"
                     /db_xref="GeneID:133066901"
ORIGIN      
        1 maparagfcp lllllllglw vaedpvsarp gnmtpvqwfe tqhvqprpqg cntaipkink
       61 fskhckdlst flhksiycvv ttcqipniac knghknchqs qkpisltvce llsgrcpdcr
      121 ykekqldaff ivacdlpqqk ddlrwvilhs ggtvkgeqgf peaaavvade fs
//
LOCUS       XP_061014272             127 aa            linear   MAM 02-DEC-2023
DEFINITION  ribonuclease-like [Dama dama].
ACCESSION   XP_061014272
VERSION     XP_061014272.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158289.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..127
                     /product="ribonuclease-like"
                     /calculated_mol_wt=14317
     Region          7..127
                     /region_name="RNase_A_canonical"
                     /note="Canonical RNase A family includes all vertebrate
                     homologues to the bovine pancreatic ribonuclease A (RNase
                     A) that contain the catalytic site, necessary for RNase
                     activity. In the human genome 8 RNases, refered to as
                     'canonical' RNases, have been...; cd06265"
                     /db_xref="CDD:119387"
     Site            order(12..21,31,35,37..39,48,51..56,89,108,122)
                     /site_type="active"
                     /note="dimerization with domain swap [active]"
                     /db_xref="CDD:119387"
     Site            order(16,48,52,78,90,124..125)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:119387"
     Site            order(49,81,92,107,109,111..112,114)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:119387"
     CDS             1..127
                     /gene="LOC133066902"
                     /coded_by="XM_061158289.1:1..384"
                     /db_xref="GeneID:133066902"
ORIGIN      
        1 mdqpafseaq dllhhqtdrp rtkisakhky ycdmmmkvrg latdkscekn ktsvhsvspt
       61 trglcegpav tcmktsefyn chliifkviq ctlhpvavpp hcyykgvtfq rdvrivcagk
      121 hpihlde
//
LOCUS       XP_061014273             318 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 10G2-like [Dama dama].
ACCESSION   XP_061014273
VERSION     XP_061014273.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158290.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..318
                     /product="olfactory receptor 10G2-like"
                     /calculated_mol_wt=35120
     Region          30..304
                     /region_name="7tmA_OR10G-like"
                     /note="olfactory receptor subfamily 10G and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15916"
                     /db_xref="CDD:320582"
     Region          30..56
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320582"
     Region          64..90
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320582"
     Site            order(86,89..90,102..107,109..110,113,158,160..164,200,
                     203..205,207..209,211..212,257,260..261,263..264,267,
                     271..272,274..276,279,282..283)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320582"
     Region          102..132
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320582"
     Region          145..166
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320582"
     Region          200..230
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320582"
     Region          237..267
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320582"
     Region          272..297
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320582"
     CDS             1..318
                     /gene="LOC133066903"
                     /coded_by="XM_061158290.1:1..957"
                     /db_xref="GeneID:133066903"
ORIGIN      
        1 mgktrntsld tvvtdfillg lshpprlrtl lflvffiiyi ltqlgnllil ltvwadpklh
       61 trpmyillgv lsfldmwlss vivprlildf tpaskripfg gcaaqlyffh flgstqcfly
      121 tlmaydryla icqplrypal mngrlctilv agawvagsih gsiqatltfr lpycgpnqvd
      181 yffcdipavl rlacadttvn elvtfvdigv vaascftlil lsyanivhai lqirtadgrr
      241 rafstcgshl tvvtvyyvpc ifiylragsk spldgavavf ytvvtpllnp liytlrnqev
      301 ksalkriaag rgagsedk
//
LOCUS       XP_061014274             318 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 10G2 [Dama dama].
ACCESSION   XP_061014274
VERSION     XP_061014274.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158291.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..318
                     /product="olfactory receptor 10G2"
                     /calculated_mol_wt=35086
     Region          30..304
                     /region_name="7tmA_OR10G-like"
                     /note="olfactory receptor subfamily 10G and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15916"
                     /db_xref="CDD:320582"
     Region          30..56
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320582"
     Region          64..90
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320582"
     Site            order(86,89..90,102..107,109..110,113,158,160..164,200,
                     203..205,207..209,211..212,257,260..261,263..264,267,
                     271..272,274..276,279,282..283)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320582"
     Region          102..132
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320582"
     Region          145..166
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320582"
     Region          200..230
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320582"
     Region          237..267
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320582"
     Region          272..297
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320582"
     CDS             1..318
                     /gene="LOC133066905"
                     /coded_by="XM_061158291.1:1..957"
                     /db_xref="GeneID:133066905"
ORIGIN      
        1 mgktrntsld tvvtdfillg lshpprlrtl lflvffiiyi ltqlgnllil ltvwadpklh
       61 trpmyillgv lsfldmwlss vivprlildf tpaskripfg gcaaqlyffh flgstqcfly
      121 tlmaydryla icqplrypal mngrlctilv agawvagsih gsiqatltfr lpycgpnqvd
      181 yficdipavl rlacadttvn elvtfvdigv vaascftlil lsyanivhai lqirtadgrr
      241 rafstcgshl tvvtvyyvpc ifiylragsk spldgavavf ytvvtpllnp liytlrnqev
      301 ksalkriaag rgagsedk
//
LOCUS       XP_061014276             245 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133066914 [Dama dama].
ACCESSION   XP_061014276
VERSION     XP_061014276.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158293.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 28% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..245
                     /product="uncharacterized protein LOC133066914"
                     /calculated_mol_wt=27210
     Region          24..109
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          39..43
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          52..55
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          90..94
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          104..109
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          188..>242
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          203..207
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          216..220
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..245
                     /gene="LOC133066914"
                     /coded_by="XM_061158293.1:88..825"
                     /db_xref="GeneID:133066914"
ORIGIN      
        1 mkrqwgalmg llwvqicwvr gvkveqspsv lklqeganst lrcnfsaavs svhwfqqnpg
       61 sslttlfsia sgtkqnerls stvnfkerys tlhiaasqle daatylcave aqcslvicsl
      121 cpncsclspa ppqgytmqvp cylfgipdsy fstfffrrsd plrlsfhfff fcpsyprnll
      181 cvslgneveq spstlsvqeg ntavitctyt dtaseyfpwy kqepgkgpql lvaihsnmge
      241 kktrd
//
LOCUS       XP_061014277             231 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133066928 [Dama dama].
ACCESSION   XP_061014277
VERSION     XP_061014277.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158294.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 50% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..231
                     /product="uncharacterized protein LOC133066928"
                     /calculated_mol_wt=26411
     Region          24..113
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          39..43
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409503"
     Region          53..57
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409503"
     Region          94..98
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409503"
     Region          108..113
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409503"
     CDS             1..231
                     /gene="LOC133066928"
                     /coded_by="XM_061158294.1:81..776"
                     /db_xref="GeneID:133066928"
ORIGIN      
        1 mplfsllwvf laftfsgsgv aqnviqdqpd isgqlgqsvt lncqyratls yyymfwykll
       61 pngemiylig qvsssqnard grysvnfqkt rksisltisd leledsaeyf calweltvle
      121 vmgkakqkpq glikesfpaa epqlkyapay prpemvlcql aynqksrttv iqnkrlilrn
      181 rtlrqllelv eefiqscyla fgaepeftln qlecrlerki aygqkhgktd i
//
LOCUS       XP_061014281             511 aa            linear   MAM 02-DEC-2023
DEFINITION  GTP-binding protein 4-like [Dama dama].
ACCESSION   XP_061014281
VERSION     XP_061014281.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158298.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 19% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..511
                     /product="GTP-binding protein 4-like"
                     /calculated_mol_wt=58334
     Region          <43..103
                     /region_name="NOG1_N"
                     /note="NOG1 N-terminal helical domain; pfam17835"
                     /db_xref="CDD:436080"
     Region          107..278
                     /region_name="NOG"
                     /note="Nucleolar GTP-binding protein (NOG); cd01897"
                     /db_xref="CDD:206684"
     Site            113..120
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206684"
     Site            order(116,118..121,227..228,230,259..261)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206684"
     Site            129..143
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206684"
     Site            140
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206684"
     Site            159..162
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206684"
     Site            162..185
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206684"
     Site            227..230
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206684"
     Site            259..261
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206684"
     Region          336..384
                     /region_name="NOGCT"
                     /note="NOGCT (NUC087) domain; pfam08155"
                     /db_xref="CDD:462381"
     Region          <451..>481
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          468..472
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..511
                     /gene="LOC133066953"
                     /coded_by="XM_061158298.1:1..1536"
                     /db_xref="GeneID:133066953"
ORIGIN      
        1 mlisvifhqf lclqgrllst psnsnqnlrn ekplptqnic nilvdnvakd yvrlmkygds
       61 lyrckqlkra algrmctiik gqkqsleyle qvrqhlsrlp tidpntrtll lcgypnvgks
      121 sfinkvkrad vdvqpyaftt kslfvghmdy kylrwqvvdt pgildhpled rntiemqait
      181 alahlraavl yvmdlseqcg hglaeqlelf rnlrplfvnk pliivankcd vkriselsgd
      241 nqkifldlqa egfpvvetst lteegvirvk teacdrllah rvetkmkgnk vnevlnrlhl
      301 avpsrrdgke rppfipegvv arrkrmelge pkrrwerdle lemgddyild lqkywdimns
      361 sekhdkisei weghniadyi dpdimqklee lekeeelrta ageydseses edeeiaeirq
      421 lakqirekkk lkilqsrekd tqgprmprta kkeegiftvs lnksakqlsl hitasqpgds
      481 aptsaasarc spgtrslypd lqprpqthpa e
//
LOCUS       XP_061014284             240 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133066994 [Dama dama].
ACCESSION   XP_061014284
VERSION     XP_061014284.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158301.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 31% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..240
                     /product="uncharacterized protein LOC133066994"
                     /calculated_mol_wt=27273
     Region          71..>162
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          87..91
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409503"
     Region          103..107
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409503"
     Region          144..148
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409503"
     Region          158..162
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409503"
     CDS             1..240
                     /gene="LOC133066994"
                     /coded_by="XM_061158301.1:39..761"
                     /db_xref="GeneID:133066994"
ORIGIN      
        1 mntttptscr geshryrvvc icaarhsktl nsqleaelst fvqgnpclmp lfsllwvfla
       61 ftfsgsgvaq kvtqdqpyit sqigqsviln cryelrrsgy thylfwykql psgemtflir
      121 qessgrnarn grysvnfera qnsisltisa lqledsakyf cavweltvle vmgkavqkpq
      181 tlinesppaa rpqlkctpad lrqemvvlrl fhlwsgsedl ilnknsfhvi wkqvsrvtfy
//
LOCUS       XP_061014286             608 aa            linear   MAM 02-DEC-2023
DEFINITION  MLV-related proviral Env polyprotein-like [Dama dama].
ACCESSION   XP_061014286
VERSION     XP_061014286.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158303.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..608
                     /product="MLV-related proviral Env polyprotein-like"
                     /calculated_mol_wt=67883
     Region          10..585
                     /region_name="TLV_coat"
                     /note="ENV polyprotein (coat polyprotein); pfam00429"
                     /db_xref="CDD:306850"
     CDS             1..608
                     /gene="LOC133067009"
                     /coded_by="XM_061158303.1:1..1827"
                     /db_xref="GeneID:133067009"
ORIGIN      
        1 mrdsllwvtl gvlgvlekgg htyqnphqpf qvtwilknge tyeelnqttd tqpkdkwwpd
       61 lyfnltklie qsgyskcrvr slgfyacpgh qreniktcgg mvsryckswg cvtsndgyrk
      121 wsvtrpdlin msftgplpks dwqgqpsnpg qcsdqiqlsf tqqgrtenrw isglswgvvi
      181 ydtygtgsns atlyvqqvlq paqthvmgpn qiitappprp spqgtnaanv vtsptptpsl
      241 qltqtdppet qeplwalike tygalnhsnp natqscwlcy tshppyyeav glnatynlst
      301 lsnppecswg drkvgltmkq vwgsgtclst vptdtqtlca qtdndtnftd ktyvipeigg
      361 wwvcsrtglt pclhlavfdq srefcvmvvv vpkityhsee vlynfwdqdt paprhkrepi
      421 taitlatlfa lgaagtgtgi aslttqhqgl itlrvaided iarieksmma leksltslse
      481 vvlqnrrgld liflqqgglc aalkeeccfy adhtgvvres makvregler rkrereaqqg
      541 wfkswlrnsp wlttllstlm gpliilllll tfgpcllnkl lafvkqrlnt vqlmvlrqqy
      601 qglptdtl
//
LOCUS       XP_061014288             429 aa            linear   MAM 02-DEC-2023
DEFINITION  probable asparagine--tRNA ligase, mitochondrial, partial [Dama
            dama].
ACCESSION   XP_061014288
VERSION     XP_061014288.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158305.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         <1..429
                     /product="probable asparagine--tRNA ligase, mitochondrial"
     Region          1..426
                     /region_name="asnC"
                     /note="asparaginyl-tRNA synthetase; Validated; PRK03932"
                     /db_xref="CDD:235176"
     CDS             1..429
                     /gene="LOC133067020"
                     /coded_by="XM_061158305.1:<1..1290"
                     /db_xref="GeneID:133067020"
ORIGIN      
        1 wirsvrsqke vlflhindgs sleslqvvad ssfdsrelaf gssvevqgql vkspskkqnv
       61 elkaekievv gncdakafpf kykerhpley lrqyphlrcr tnvlgsilrv rseataaihs
      121 ffkdsgfvhi htpvitsndc egagelfqve psskikvpee nffnipvflt vsgqlhlkvm
      181 sgaftqvftf gptfraensq srrhlaefym veaeisfler lqdlmqvmes lfkttamtvl
      241 sncpkdvelc hkfiapgqkd rlehmlknnf liisyteave ilkqasqnft ftpewgadlh
      301 tehekylvkh cgdipvfvin yplalkpfym rdnedgpqht vaavdllvpg vgelfggslr
      361 eeryhfleqr larlglteay qwyldlrlfg tvphggfgmg fecylqcilg idnikdvspf
      421 prfthscll
//
LOCUS       XP_061014290             231 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133067021 [Dama dama].
ACCESSION   XP_061014290
VERSION     XP_061014290.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158307.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 49% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..231
                     /product="uncharacterized protein LOC133067021"
                     /calculated_mol_wt=26318
     Region          24..113
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          39..43
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409503"
     Region          53..57
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409503"
     Region          94..98
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409503"
     Region          108..113
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409503"
     CDS             1..231
                     /gene="LOC133067021"
                     /coded_by="XM_061158307.1:85..780"
                     /db_xref="GeneID:133067021"
ORIGIN      
        1 mplssllwmf laftfsgsgv aqtviqdqpd isgqlgqsvt lncqyrvtls yfymfwykll
       61 pngemiylig qvstgqntrd grysvnfqka rksisltisd leledsaeyf calweltvle
      121 vmgkakqkpq glikesfpaa epqlkyapay prpemvlcql gynqksrttv iqnkrlilrn
      181 rtlrqllelv eefiqscyla fgaepeftln qlechlerki gygqkhgktd i
//
LOCUS       XP_061014293             225 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133067055 [Dama dama].
ACCESSION   XP_061014293
VERSION     XP_061014293.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158310.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 30% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..225
                     /product="uncharacterized protein LOC133067055"
                     /calculated_mol_wt=25152
     Region          25..115
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          39..43
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          52..56
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          93..97
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          107..112
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..225
                     /gene="LOC133067055"
                     /coded_by="XM_061158310.1:118..795"
                     /db_xref="GeneID:133067055"
ORIGIN      
        1 mekllvlslv ilwlqlakvn sqqgeqnlqt lsiqegenvt mncsyksiti talqwyrqds
       61 rqgfvhlilm rsnerqkysg rlhftldnsi kssslsitas qaedaatylc aadpqcsvgt
      121 rspsrnlpel slrsrnsvqs wwfclptkes lqtasntkgs ssqiryfrhi igvaafsfls
      181 lnkgfrldep kdpsspnftr spledeegll skeglicymc spltt
//
LOCUS       XP_061014295             225 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133067070 [Dama dama].
ACCESSION   XP_061014295
VERSION     XP_061014295.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158312.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 46% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..225
                     /product="uncharacterized protein LOC133067070"
                     /calculated_mol_wt=25179
     Region          23..144
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          39..43
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409503"
     Region          55..59
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409503"
     Region          96..100
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409503"
     Region          110..115
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409503"
     Region          <117..179
                     /region_name="V-set"
                     /note="Immunoglobulin V-set domain; pfam07686"
                     /db_xref="CDD:462230"
     Region          139..142
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409503"
     CDS             1..225
                     /gene="LOC133067070"
                     /coded_by="XM_061158312.1:1..678"
                     /db_xref="GeneID:133067070"
ORIGIN      
        1 mplfgllwvf laftfsgssl aqkvtrvqta vssrvgqivt lnclyelswt mdyyyifwck
       61 qlpsgemnfl ihqysehlna rngrysvnfq kadksislii salqledsak yfcalweltv
      121 lewykqrpgd spvllmilgk ggevktqqrl tfrfgesrqh sslplmaaqp sdvgtyfcaq
      181 kqcsgstcsl spnltvgsrv hpsstplrag aekaevmmst kklnf
//
LOCUS       XP_061014298             689 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: ciliated left-right organizer metallopeptidase
            [Dama dama].
ACCESSION   XP_061014298
VERSION     XP_061014298.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158315.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 20% of CDS bases
            frameshifts          :: corrected 4 indels
            internal stop codons :: corrected 10 genomic stop codons
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..689
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..689
                     /product="LOW QUALITY PROTEIN: ciliated left-right
                     organizer metallopeptidase"
                     /calculated_mol_wt=74321
     Region          <235..>315
                     /region_name="Peptidase_M8"
                     /note="Leishmanolysin; cl19482"
                     /db_xref="CDD:388572"
     CDS             1..689
                     /gene="CIROP"
                     /coded_by="XM_061158315.1:1..2070"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 4 bases in 3 codons;
                     deleted 1 base in 1 codon; substituted 10 bases at 10
                     genomic stop codons"
                     /db_xref="GeneID:133067106"
ORIGIN      
        1 metwkksrpe lhyppsrtvi ipsegagslh prappppppr hrdacfhrwq kegtpgkgdc
       61 hmpgppgpps qcckipvgvv gverglftst pyptlpqara assrclhdet qxslsllgpp
      121 fsqlppnlcs ssltlpspqd pqplqtqtch igdpvskgaw npeedevrge sxalaagtea
      181 eexnrpscxv plkqgpllln pnpaqychav wgdldnpnyh ryegeiclev kkggpgiqnt
      241 dfxlyvwvvh tskchqegsi vaptaccqld xedrpladtt vyctqhxpsl shsvmvmaaf
      301 yellhalgfs gwlfqtwreg ispfslreny stkqvtrqde wgxllsttaw pstwnwrrlt
      361 gcflgrsvtt cgngtpgffc tgsglgchyl rldkrscspd ptmegpcrfk pliggnecxk
      421 kgngfppgae nphgeiyqlx srrflanlts qllpgdetrp psrmphvkea eltgccclhq
      481 ylatmifcss cwlcxtnevt naitykpvsl siqdllfqls lglvgppgds lgkeexetlt
      541 eavlqalvsr egtgrcyihs plittslvfa ahmwkspgcq gssvgmltra ltftlqkkpl
      601 evhyggailt ikyskflvtl dhnsfmthxg lsvgfcpmlf flwmhwepwp irkqllfrcd
      661 llpfyhspel qcttggpeeg segvmlpga
//
LOCUS       XP_061014299             194 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-25 [Dama dama].
ACCESSION   XP_061014299
VERSION     XP_061014299.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158316.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 12% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..194
                     /product="interleukin-25"
                     /calculated_mol_wt=21702
     Region          102..188
                     /region_name="IL17"
                     /note="Interleukin-17; pfam06083"
                     /db_xref="CDD:461823"
     CDS             1..194
                     /gene="IL25"
                     /coded_by="XM_061158316.1:1..585"
                     /db_xref="GeneID:133067107"
ORIGIN      
        1 myqnlreqla egasrlggss fltglflqav aflamvmgth tlclgsqrrc thwpgccpsk
       61 gqnpteewlk wnsmlmsppe ttslahhpes cssskdgpln srsiapwiye ldrdldrlpq
      121 dlyharclcp hcvslktgsh mdplgnsell yhnqtvfyrr pcpgqqgahh gyclerrlyr
      181 vslacvcvrp rvma
//
LOCUS       XP_061014300             311 aa            linear   MAM 02-DEC-2023
DEFINITION  small ribosomal subunit protein uS5-like [Dama dama].
ACCESSION   XP_061014300
VERSION     XP_061014300.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158317.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..311
                     /product="small ribosomal subunit protein uS5-like"
                     /calculated_mol_wt=33178
     Region          72..291
                     /region_name="PTZ00070"
                     /note="40S ribosomal protein S2; Provisional"
                     /db_xref="CDD:240255"
     CDS             1..311
                     /gene="LOC133067108"
                     /coded_by="XM_061158317.1:1..936"
                     /db_xref="GeneID:133067108"
ORIGIN      
        1 mtpvlregpe arealeweaa vasaeasvva sgvvagagag vvagaggrgr grgrgrgrgr
       61 grgrgrgarg gkaedkewlp vtklgrlvkd mkiksleeiy lfslpikese iidfflgasl
      121 kdevlkimpv qkqtragqwt rfkafvaigd ynghvglgvk cskevatair gaiilaklsi
      181 vpvrrgywgn kigkphtvpc kvtgrcgsvl vrlipaprgt givsapvpkk llmmagiddc
      241 ytsargctat lgnfakatfd aisktysylt pdlwkemvft kspyqeftdh lvkthtrvsv
      301 qrtqapavat t
//
LOCUS       XP_061014302            1458 aa            linear   MAM 02-DEC-2023
DEFINITION  capping protein, Arp2/3 and myosin-I linker protein 3 [Dama dama].
ACCESSION   XP_061014302
VERSION     XP_061014302.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158319.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1458
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1458
                     /product="capping protein, Arp2/3 and myosin-I linker
                     protein 3"
                     /calculated_mol_wt=159209
     Region          116..204
                     /region_name="Carm_PH"
                     /note="Carmil pleckstrin homology domain; pfam17888"
                     /db_xref="CDD:436119"
     Region          331..359
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          <360..743
                     /region_name="RNA1"
                     /note="Ran GTPase-activating protein (RanGAP) involved in
                     mRNA processing and transport [Translation, ribosomal
                     structure and biogenesis]; COG5238"
                     /db_xref="CDD:444072"
     Region          361..389
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          390..421
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          422..451
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          452..477
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          479..506
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          511..541
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          542..565
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          566..595
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          622..656
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          657..676
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          864..1152
                     /region_name="CARMIL_C"
                     /note="CARMIL C-terminus; pfam16000"
                     /db_xref="CDD:464966"
     CDS             1..1458
                     /gene="CARMIL3"
                     /coded_by="XM_061158319.1:1..4377"
                     /db_xref="GeneID:133067111"
ORIGIN      
        1 makssaeltr elqgtrlrws lgrsvrepps psaflpavhp gpsaphasrf qgsplplhps
       61 sghrcpqsil rcpfaspvrt ylsqsrpsrs svtayhppad sirrclsqga vlqqhrvkle
      121 tkpkkfedrv laltswrlhf fplkvpakve ssfnvleira fntlsqnqil vetergmvsm
      181 rlpsaesvdq vtrhvssals kvcpgpgsli rrgnadtpdg prdtspnset ststthsvcg
      241 gfsetyaalc dynglhcree vqwdvdtiyh aednrefnll dfshlesrdl almvaalayn
      301 qwftklyckd lrlgsevleq vlhtlsksgs leelvldnag lktdfvqkla gvfgengscv
      361 lhaltlshnp iedkgflsls qqllcfptgl tklclaktai sprglqalgq tfganpafas
      421 slryldlskn pgllatdean alysflaqpn alvhldlagt dctidsllga llhgccshlt
      481 ylnlarnscs hrkgreappa fkqffssayt lshvnlsatr lplealrall qglslnshls
      541 dlhldlssce lrsagaqalq eqlgavtcvg sldlsdngfd sdlltlvpal gknkslkhlf
      601 lgknfnvkak tleeilhklv qliqeedcsl qslsvadsrl klrtsilina lgsntclakv
      661 dlsgngmedi gakmlskalq insslrtilw drnntsalgf ldiaralesn htlrfmsfpv
      721 sdisqayrsa pertedvwqk iqwclvrnnh sqtcpqeqaf rlqqglvtss aeqmlqrlcg
      781 rvqeevralr lcplepvqde llyardlikd aknsralfps lyelghmlan dgpvrqrles
      841 vasevskavd kelqvilesm vsltqelcpv amrvaeghnk mlsnvaervt vprnfirgal
      901 leqagqdiqn kldevklsvv tyltnsivde ilqelyhshk slarhlaqlr tlsdppggpg
      961 qgqdlssrgr grnhdheett ddelgtnidt maikkqkrcr kirpvsafis gspqdmesql
     1021 gslgippgwf sglgssqpat sgsweglsel pthgyklrhq tqgrprpprt tppgpgrpsa
     1081 pvpgtrqeng matrldegle dffsrrvmde sssyprtlrt lrpglseppl pplqkkrrrg
     1141 lfhfrrprsf kgdrgpgspt tglllppppp ppptqespps pdppslgnns spcwspeees
     1201 sllptfggsr gpsfrrktgt egaepgeggq apgtaqqprv hgvalpglgr akgwsfdgkr
     1261 egtgpdlegs vqawqkrrss ddagpgawkp ppppqstkps fsamrraeat whiaeesapn
     1321 hgcqspspas qdgeeenega vfpertvptr naklqdppla lkppkpvavp rghrppqepg
     1381 greevetgda apgmntprlr lgsqqdqeep eiqgppdpgr rtaplkpkrt rraqscdkle
     1441 pdrrrppdpt gtsepgtd
//
LOCUS       XP_061014303             355 aa            linear   MAM 02-DEC-2023
DEFINITION  neuroplastin [Dama dama].
ACCESSION   XP_061014303
VERSION     XP_061014303.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158320.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..355
                     /product="neuroplastin"
                     /calculated_mol_wt=38440
     Region          125..176
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          137..142
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          158..162
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          172..176
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          207..290
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          212..216
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          225..229
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          255..259
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          270..275
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..355
                     /gene="NPTN"
                     /coded_by="XM_061158320.1:1..1068"
                     /db_xref="GeneID:133067112"
ORIGIN      
        1 mlsllsrprp gakvsrglga aavgggrgrt epchgclprs lpralarplp psppfpgpgs
       61 gpgpfavpss agrmsgsslp salalslllv sgsllpgpga aqneprivts eeviiressp
      121 psvtlqcnlt snshtltysy wtkngvelta trknasnmey rinkpraeds geyhcvyqfl
      181 sapkanatie vkaapditgh krsenknegq dammycksvg yphpewtwhk kengmlvdiv
      241 ntsgrfiiik renytelsit nlqitedpge yecnatnsig sssmvtilrv rshlaplwpf
      301 lgilaeiiil vviivvyekr krpdevpddd epagpmktns tnnhkdknlr qrntn
//
LOCUS       XP_061014304             264 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 202 [Dama dama].
ACCESSION   XP_061014304
VERSION     XP_061014304.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158321.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 9% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..264
                     /product="transmembrane protein 202"
                     /calculated_mol_wt=30212
     CDS             1..264
                     /gene="TMEM202"
                     /coded_by="XM_061158321.1:1..795"
                     /db_xref="GeneID:133067113"
ORIGIN      
        1 mereeqtvft fyypevpkvk gdrrykrptl ptqhpsalmp pkrrqqhvdq thgyirmfcg
       61 slcgfsllvl icmsplnwvq flvindglel yaglwiscnh elcwshtpkp pyylqysraf
      121 flisvftilv vlgwlfsscl prrgrmtgnl dlkvsmlsfi sasclllcli lfleqvdlys
      181 setmesallw pyqvnwgsdf iylfagivsf lnyitsrspp ldqditavpt eksrlgfgpv
      241 tlpveddqse lqteslsetn thqi
//
LOCUS       XP_061014305             394 aa            linear   MAM 02-DEC-2023
DEFINITION  GRAM domain-containing protein 2A [Dama dama].
ACCESSION   XP_061014305
VERSION     XP_061014305.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158322.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..394
                     /product="GRAM domain-containing protein 2A"
                     /calculated_mol_wt=43443
     Region          159..252
                     /region_name="PH-GRAM_GRAMDC"
                     /note="GRAM domain-containing protein (GRAMDC) Pleckstrin
                     Homology-Glucosyltransferases, Rab-like GTPase activators
                     and Myotubularins (PH-GRAM) domain; cd13220"
                     /db_xref="CDD:275406"
     CDS             1..394
                     /gene="GRAMD2A"
                     /coded_by="XM_061158322.1:1..1185"
                     /db_xref="GeneID:133067117"
ORIGIN      
        1 mgwarparaa ngrsgachpr rsgvgirspa lsggsamtal spgaaagasr ceqvsgaslp
       61 aaflrvglaa pweadspsdp ginwtsgfqe grnqqmrgkt aslkkstekl ggvpraqdts
      121 lswpeglkge dvkkcsregt lrskynqqyh klfkdiplee vvlkvcscal qrdlllqgrl
      181 yispnwlcfh aslfgkdikv vipvvsvqmi kkhkmarllp nglaittnts qkyvfvslls
      241 rdsvydmlrr vcthlqpssk kslcvrefpe epecesleal ipemkwrkvc pasrslslpd
      301 sircisrasm estdsffpsk kppgseisdc eeekleegpt rngelrlwdy rllkfffvli
      361 cflvmsssyl afrisqleqq lcslnwggsv pghr
//
LOCUS       XP_061014306             191 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: THAP domain-containing protein 10 [Dama dama].
ACCESSION   XP_061014306
VERSION     XP_061014306.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158323.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 36% of CDS bases
            frameshifts :: corrected 2 indels
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..191
                     /product="LOW QUALITY PROTEIN: THAP domain-containing
                     protein 10"
                     /calculated_mol_wt=20194
     Region          39..120
                     /region_name="THAP"
                     /note="The THAP domain is a putative DNA-binding domain
                     (DBD) and probably also binds a zinc ion; smart00980"
                     /db_xref="CDD:214951"
     CDS             1..191
                     /gene="THAP10"
                     /coded_by="XM_061158323.1:1..576"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon;
                     deleted 1 base in 1 codon"
                     /db_xref="GeneID:133067118"
ORIGIN      
        1 mqqrrsrqvr algmrgraeg agsqlpapsp eaaavpircg nttksgkllf rfpkgrgraa
       61 avdsfvpgxp anwyrcsdss vicsehfapv cfdvssviqk nlrfserlrp vagavsilhp
      121 vasllkpkgk eeersgrpgk rgkpqavrqp qatpgpasct plwpakrafg ftdkgppees
      181 peglartpvc g
//
LOCUS       XP_061014307             385 aa            linear   MAM 02-DEC-2023
DEFINITION  sperm equatorial segment protein 1 [Dama dama].
ACCESSION   XP_061014307
VERSION     XP_061014307.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158324.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..385
                     /product="sperm equatorial segment protein 1"
                     /calculated_mol_wt=43427
     Region          40..350
                     /region_name="SPESP1"
                     /note="Sperm equatorial segment protein 1; pfam15754"
                     /db_xref="CDD:464848"
     CDS             1..385
                     /gene="SPESP1"
                     /coded_by="XM_061158324.1:1..1158"
                     /db_xref="GeneID:133067119"
ORIGIN      
        1 mgegrggpre tretwllvlf rlrgvatspr irvgrgsqgv tvtpdeeqnl nhyvqvlqnl
       61 ilsvptkepg rqkkskspnn vnsigprvsr vkeinythdv spgdndvlin pvseetttfp
      121 trgftleidk kkrtkstafw sikpnnvsvv lhakepyiek depepepepe pepepepter
      181 rteapkqvps vtepsqdvts lsrstdfdtv meeedvpqls gdngmdyles hdvynedvlk
      241 riadinsqlh hiplpesykp eyradirask ehlkrslala vaaehklekm yksqmlpqgr
      301 ssggiydivt vinmlynsry klseyldiky vpsemrgkat vvvrtlkkil cvghgeethn
      361 llkqlinnni kilhildthd kddsg
//
LOCUS       XP_061014309             447 aa            linear   MAM 02-DEC-2023
DEFINITION  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 [Dama dama].
ACCESSION   XP_061014309
VERSION     XP_061014309.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158326.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..447
                     /product="very-long-chain (3R)-3-hydroxyacyl-CoA
                     dehydratase 3"
                     /calculated_mol_wt=51846
     Region          93..200
                     /region_name="p23_hB-ind1_like"
                     /note="p23_like domain found in human (h) butyrate-induced
                     transcript 1 (B-ind1) and similar proteins. hB-ind1
                     participates in signaling by the small GTPase Rac1. It
                     binds to Rac1 and enhances different Rac1 effects
                     including activation of nuclear factor (NF)...; cd06465"
                     /db_xref="CDD:107222"
     Site            order(99,111..112,157,162,176,187,189..190,192..193,195)
                     /site_type="active"
                     /note="Hsp90 binding site [active]"
                     /db_xref="CDD:107222"
     Region          280..440
                     /region_name="PTPLA"
                     /note="Protein tyrosine phosphatase-like protein, PTPLA;
                     pfam04387"
                     /db_xref="CDD:461286"
     CDS             1..447
                     /gene="HACD3"
                     /coded_by="XM_061158326.1:1..1344"
                     /db_xref="GeneID:133067120"
ORIGIN      
        1 mdsrqvrgnd napahsrgvr serpgaaprp lahhcagaar ergssggcgl palrsaglcg
       61 lrrtsssral petarrsear rgsvvmenqv ltphvywaqr hrelylrvel sdvqnpaisi
      121 tenvlhfkaq ghgakgdnvy efhvefldlv kpepvykltq rqvnitvqkk vsqwwerltk
      181 qekrplflap dfdrwldesd aemelrakee erlnklrles qgspetltsl kkgylfmynl
      241 vqflgfswif vnmtvrffil gkesfydtfh tvadmmyfcq mlaavesina aigvtktpvi
      301 pslfqllgrn filfiifgtm eemqnkavvf fvfyiwstve ifrypfymls cidmdwkvlt
      361 wlrytvwipl ypmgclaeav sviqsipifn etgrfsftlp ypvkikvrfs fflqiylill
      421 flglyvnfrh lykqrrrrfg qkkkkih
//
LOCUS       XP_061014310             785 aa            linear   MAM 02-DEC-2023
DEFINITION  immunoglobulin superfamily DCC subclass member 3 [Dama dama].
ACCESSION   XP_061014310
VERSION     XP_061014310.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158327.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..785
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..785
                     /product="immunoglobulin superfamily DCC subclass member
                     3"
                     /calculated_mol_wt=83548
     Region          37..131
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          55..59
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          68..72
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          90..94
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          110..115
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          124..127
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          139..223
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          152..156
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          165..169
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          188..192
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          202..207
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          216..219
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          234..306
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          327..413
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          343..347
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409570"
     Region          356..360
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409570"
     Region          <367..>597
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          377..383
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409570"
     Region          393..398
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409570"
     Region          406..409
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409570"
     CDS             1..785
                     /gene="IGDCC3"
                     /coded_by="XM_061158327.1:1..2358"
                     /db_xref="GeneID:133067121"
ORIGIN      
        1 maasraappr rrprlllqll pllllpapsd glghsaelaf avepsddvav pgqpvmlgck
       61 vegtppvrit wrkngvelad sthstvlang slmirhflld ggggpsdegd yecvaqnrfg
      121 lvvsrkariq aatmsdfhvh pqatvgeegg varfqcqihg lpkplitwek nrvpidtdne
      181 rytllpkgvl qitglraeds gvfhcvasni asvrvshgar ltvtgsgsga ykepailvgp
      241 enltltvhqt avlecvatgn prpivswsrl dgrpigvegi qvlgtgnlii sdvtvqhsgv
      301 yvcaanrpgt rvrrtaqgrl vvqapaefvq hpqsisrpag ttamftcqaq geppphvtwl
      361 kngqvlgpgg hvrlknnnst ltisgigped eaiyqcvaen sagssqasar ltvlwaeglp
      421 gpplnvravp vsstevrvsw teplvntrei igyvlhirka adppeleyqe avskstfqhl
      481 vsdlepstay sfyikaytpr gassasaptl astlgeapap pplsarvlgs stlqllwepw
      541 prlaqheggf klfyrpaska aftgpillpg tvssynlsql dptavyevkl laynqhgdgn
      601 atvrfmslrg aaertalspp cdcrkeeatn qtsttgivig ihigvtciif cvlfllfgqr
      661 grvllckdve nqlsppqgpr sqrdpgilap ngvgraergl lgrdgkrvdm keleqlfpra
      721 gavqphprpt dpeapalcev tqlsmlplrg lslleempse alppqdvgpg lqsegpaaqp
      781 assgl
//
LOCUS       XP_061014311             454 aa            linear   MAM 02-DEC-2023
DEFINITION  S-methylmethionine--homocysteine S-methyltransferase BHMT2-like
            [Dama dama].
ACCESSION   XP_061014311
VERSION     XP_061014311.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158328.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 22% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..454
                     /product="S-methylmethionine--homocysteine
                     S-methyltransferase BHMT2-like"
                     /calculated_mol_wt=49741
     Region          114..396
                     /region_name="S-methyl_trans"
                     /note="Homocysteine S-methyltransferase; pfam02574"
                     /db_xref="CDD:460598"
     CDS             1..454
                     /gene="LOC133067123"
                     /coded_by="XM_061158328.1:1..1365"
                     /db_xref="GeneID:133067123"
ORIGIN      
        1 maptrgprvk kvrklslrvs rlvqahrsgp ggaahlhpql fystvpecvp ltfeekrlse
       61 ppkprtglkp vpdaetsdpq rgggkmekdg glvfslratt sngllerlds gevvvgdgsf
      121 lltlekrgyv kaglwtpeav vehphavrql hmeflragsd vmqtftfsas ednmesqwea
      181 vntaacdlar evadkgdalv aggicqtsly ahhkdevrik klfrlqleif arknvdflia
      241 eyfehaveav wavevlkesg kpvaatmcig pegdmygitp gecavklvka gasvvgvncq
      301 fgpwtslktm slmkealqaa glkahlmvqs lgfhmpdcgk ggfldlpeyp faleprvatr
      361 wdiqkyarea ynlgvryigg ccgfepyhir aiaeelaper gflppasekh gswgsglnth
      421 tkpwirarar rdywenlrpa sgrplcpsls kpda
//
LOCUS       XP_061014312             196 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger BED domain-containing protein 3, partial [Dama dama].
ACCESSION   XP_061014312
VERSION     XP_061014312.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158329.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         <1..196
                     /product="zinc finger BED domain-containing protein 3"
     Region          17..70
                     /region_name="ZnF_BED"
                     /note="BED zinc finger; smart00614"
                     /db_xref="CDD:214746"
     CDS             1..196
                     /gene="ZBED3"
                     /coded_by="XM_061158329.1:<1..591"
                     /db_xref="GeneID:133067124"
ORIGIN      
        1 tggpdaaagr lgapyseawg yfhlaparpg haagpwatcr lcgeqvgrgp gwhastpalw
       61 khlrsahrre laesaarrsp paapgpvaaa egdwarlleq mgalavrgsl rerelarrea
      121 aveqgerale rrrralqeee raaaqarrel qaerealqar qrevsrrega lapgpplkde
      181 pegdprdgcv itrvll
//
LOCUS       XP_061014313             130 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: protein S100-Z [Dama dama].
ACCESSION   XP_061014313
VERSION     XP_061014313.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158330.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 11% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..130
                     /product="LOW QUALITY PROTEIN: protein S100-Z"
                     /calculated_mol_wt=14534
     Region          35..126
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cl08302"
                     /db_xref="CDD:415501"
     Site            order(36..53,59..61,70..71,73..75,103..106,108..109,
                     111..114,116..123)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238131"
     Site            order(53,58,61,66..67,96,98,100,102,104,107)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238131"
     CDS             1..130
                     /gene="S100Z"
                     /coded_by="XM_061158330.1:1..393"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon"
                     /db_xref="GeneID:133067126"
ORIGIN      
        1 mlgdgsrwss laftsvfspa lvicpgvlps aarrptqlel amdirirtfh cyscrxrrqv
       61 qaqqgelkmh lqqeltevls cqkdpelvdk imqdldankd nkvdfnefvv mvaaltvacn
      121 dyfveqlkkk
//
LOCUS       XP_061014314             725 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: ankyrin repeat and death domain-containing
            protein 1B [Dama dama].
ACCESSION   XP_061014314
VERSION     XP_061014314.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158331.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 39% of CDS bases
            frameshifts          :: corrected 2 indels
            internal stop codons :: corrected 1 genomic stop codons
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..725
                     /product="LOW QUALITY PROTEIN: ankyrin repeat and death
                     domain-containing protein 1B"
                     /calculated_mol_wt=80180
     Region          <108..291
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(113..115,117..118,122,125,134,136,138,142..143,
                     146..148,150..151,155,158,167,169,171,175..176,179..181,
                     183..184,188,191)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          136..167
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          169..199
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          202..235
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          335..363
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          337..429
                     /region_name="Ank_2"
                     /note="Ankyrin repeats (3 copies); pfam12796"
                     /db_xref="CDD:463710"
     Site            order(338..339,342..344,346..347,351,354,363,365,367,
                     371..372,375..377,379..380,384,387,396,398,400,404..405,
                     408..410,412..413,417,420)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          365..396
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..725
                     /gene="ANKDD1B"
                     /coded_by="XM_061158331.1:1..2178"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 2 codons;
                     substituted 1 base at 1 genomic stop codon"
                     /db_xref="GeneID:133067128"
ORIGIN      
        1 mssykslslv htklrrprpg rtaapgeapa aesgpcgarr prgpglgdle pglpapgrra
       61 earglwedlr gaaaxpemgl srgpqqerpq eeaaaaghef qlpnersfqh aaksnnlylt
      121 eklfekkvni navnnmnhiv lhfavgtnrl savdfllnhk vrvdtadkhg ltllhlaaws
      181 gslesvlmlv ragvdqraer qdgvnalhfv aqsdnmhivd hliqdlyled ldqpdekgrk
      241 pflleaergh iemieklffl nlhttekdke gspalhleak rghnpvvqxm ltqspeidev
      301 seinisatqn graslvsfll senvdlhqkm epkvsplhla vlnnhvtvvn sllsarhdad
      361 ilnlrlqtpl hvvadlgnve lvetllkagc nlkivdkqgk talavaarss rslcmdvlik
      421 aerhyaxrdw pgpcecgftp lvlccsvrgv tscissspsc vsrsggsrrg glsgakqarl
      481 rcwlclpsqs larygsfwkf pdshstkwsg virmasvhkv qmlekglavp lrqvfweflw
      541 tfrrrprhpr vfpqkwragw grgaghsvak gltlpesrvr tsrdtstrst ltfrqdhsle
      601 trhirrllrh paycqlkane rqrlarsrnf thaqrgasls rrtsegrafm hwasyltaar
      661 ggmnlqpqlc gnrvrtefpg srrqhlpfvl gsgkesfceh ghralltrlh galatqatpv
      721 kllpv
//
LOCUS       XP_061014315             142 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133067139 [Dama dama].
ACCESSION   XP_061014315
VERSION     XP_061014315.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158332.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..142
                     /product="uncharacterized protein LOC133067139"
                     /calculated_mol_wt=15472
     Region          25..81
                     /region_name="EF-hand_7"
                     /note="EF-hand domain pair; pfam13499"
                     /db_xref="CDD:463900"
     CDS             1..142
                     /gene="LOC133067139"
                     /coded_by="XM_061158332.1:1..429"
                     /db_xref="GeneID:133067139"
ORIGIN      
        1 maaaaaagsa sggssssdts stgeeermrr lfqtcdgdgd gyisrndllm vcrqlnmees
       61 vaeimnqlga dengkicfqd ftrcrmqlir eirkeeigls eksdnswkkk klrdriaswp
      121 tssdnslgsd crvpdlgpls il
//
LOCUS       XP_061014316             305 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4A15-like [Dama dama].
ACCESSION   XP_061014316
VERSION     XP_061014316.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158333.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..305
                     /product="olfactory receptor 4A15-like"
                     /calculated_mol_wt=34216
     Region          23..289
                     /region_name="7tmA_OR4A-like"
                     /note="olfactory receptor 4A and related proteins, member
                     of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15939"
                     /db_xref="CDD:320605"
     Region          24..50
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320605"
     Region          57..83
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320605"
     Site            order(79,82..83,95..100,102..103,106,151,153..157,193,
                     196..198,200..202,204..205,249,252..253,255..256,259,
                     263..264,266..268,271,274..275)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320605"
     Region          95..125
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320605"
     Region          138..159
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320605"
     Region          193..223
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320605"
     Region          229..259
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320605"
     Region          264..289
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320605"
     CDS             1..305
                     /gene="LOC133067142"
                     /coded_by="XM_061158333.1:1..918"
                     /db_xref="GeneID:133067142"
ORIGIN      
        1 meqrnnvtef vllglsqsvq gqkilfvifl liyivtmvgn llivmnvvvs smrnapmyff
       61 lgylsfmnav ysttvtpnmi iallcekkti sfqacmtklf ighlfggadl cllvvmaydr
      121 yvaickrlhy ltimnkrvca lllllawvgg llhavihpls vynlpycgpn vidhfvcdmy
      181 lllelactdt hvialialan dgaicmaift lllisygvil yslknlsqeg rrkalstcgs
      241 hitvvllffv pciftyvrpp stlsidkslt vfytiitpml npliytlrng elknamkklw
      301 irkrk
//
LOCUS       XP_061014317             305 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4A15-like [Dama dama].
ACCESSION   XP_061014317
VERSION     XP_061014317.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158334.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..305
                     /product="olfactory receptor 4A15-like"
                     /calculated_mol_wt=34393
     Region          23..289
                     /region_name="7tmA_OR4A-like"
                     /note="olfactory receptor 4A and related proteins, member
                     of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15939"
                     /db_xref="CDD:320605"
     Region          24..50
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320605"
     Region          57..83
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320605"
     Site            order(79,82..83,95..100,102..103,106,151,153..157,193,
                     196..198,200..202,204..205,249,252..253,255..256,259,
                     263..264,266..268,271,274..275)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320605"
     Region          95..125
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320605"
     Region          138..159
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320605"
     Region          193..223
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320605"
     Region          229..259
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320605"
     Region          264..289
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320605"
     CDS             1..305
                     /gene="LOC133067143"
                     /coded_by="XM_061158334.1:1..918"
                     /db_xref="GeneID:133067143"
ORIGIN      
        1 meqrnnvtef vllgltqsvq gqrilfvvfl liylvmmmgn lliiltvvfs ptlhvpmyff
       61 lgylsfldgv ysttvtpnmi idllcekkti sfqacmiqlf ighlfggadr illvvmaydr
      121 yvaickplhy ltimnkqvci llllltlvgg flhgvlhplf vynlrycgpn vidhficdmy
      181 pliklacsdt yitvltvlan dgaislvift lllisygvil hslknvsqeg rhkalstcgs
      241 hitvvllffv psaftyvrpp ctlpidkylt vfytivtpml npliytlrng emknamkklw
      301 irkgk
//
LOCUS       XP_061014318             221 aa            linear   MAM 02-DEC-2023
DEFINITION  telomere repeats-binding bouquet formation protein 2 [Dama dama].
ACCESSION   XP_061014318
VERSION     XP_061014318.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158335.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..221
                     /product="telomere repeats-binding bouquet formation
                     protein 2"
                     /calculated_mol_wt=25223
     Region          2..205
                     /region_name="TERB2"
                     /note="Telomere-associated protein TERB2; pfam15101"
                     /db_xref="CDD:464503"
     CDS             1..221
                     /gene="TERB2"
                     /coded_by="XM_061158335.1:19..684"
                     /db_xref="GeneID:133067145"
ORIGIN      
        1 mfqgqrgwfc gsvshdlrqf wvaeggtisd prvadflfsc dashpdtlri yqsldyiedn
       61 atvfhacyls avanaeikns valghfilpp aslqkeirrk igsfiweqdq hfliekhdev
      121 tsnelkafre ssvlatdhkk elskstekrf irtpvvekqm yfplqhypvn nmvtgyisid
      181 amkkflgelh dfipgssgyl ayhvqneinm saiknklknk y
//
LOCUS       XP_061014319             464 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase TRIM69 [Dama dama].
ACCESSION   XP_061014319
VERSION     XP_061014319.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158336.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..464
                     /product="E3 ubiquitin-protein ligase TRIM69"
                     /calculated_mol_wt=53268
     Region          1..57
                     /region_name="RING-HC_TRIM69_C-IV"
                     /note="RING finger, HC subclass, found in tripartite
                     motif-containing protein 69 (TRIM69) and similar proteins;
                     cd16611"
                     /db_xref="CDD:438273"
     Region          79..>105
                     /region_name="Bbox_SF"
                     /note="B-box-type zinc finger superfamily; cl00034"
                     /db_xref="CDD:469587"
     Region          275..461
                     /region_name="SPRY_PRY_TRIM69"
                     /note="PRY/SPRY domain in tripartite motif-binding protein
                     69 (TRIM69), also known as RING finger protein 36 (RNF36);
                     cd15818"
                     /db_xref="CDD:293990"
     CDS             1..464
                     /gene="TRIM69"
                     /coded_by="XM_061158336.1:205..1599"
                     /db_xref="GeneID:133067146"
ORIGIN      
        1 melhcplcnd wfrdplmlsc ghnfcqsciq nfwkqqanet fcpeckmlcq ysnctfnlvl
       61 eklvekikkl pllkghprcp ehgenlklfs kpdgrlicfq ckdarlsvgq skeflqisda
      121 vrffteelti hqgqleatlk elqslknmqk daiaahkenk lhlqqhisle flklhqflhs
      181 kekdllselr eegkalneem elnlshiqeq cllakemlms iqarmeqqnp fdflkditpl
      241 ldsleqgmrv ltpkelvsrk lspgvfkgpi qytmwrdmqs alspglsplt ldpktahpnl
      301 vlsknrtsvw hgdikqvmpd dperfdssva vlgskgftsg kwywevevak ktkwtvgvvr
      361 esilrkgscp ltpeqgfwll rlrnqtdlka ldfpscslkl snnlnkvgiy ldyeggqvsf
      421 ynaktmthiy tfsstfmekl ypyfcpclnd ggenkeplhi lhpq
//
LOCUS       XP_061014321             538 aa            linear   MAM 02-DEC-2023
DEFINITION  potassium channel subfamily K member 10 [Dama dama].
ACCESSION   XP_061014321
VERSION     XP_061014321.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158338.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..538
                     /product="potassium channel subfamily K member 10"
                     /calculated_mol_wt=58745
     Region          <148..206
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     Region          244..323
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     CDS             1..538
                     /gene="KCNK10"
                     /coded_by="XM_061158338.1:423..2039"
                     /db_xref="GeneID:133067152"
ORIGIN      
        1 mkfpietprk qvnwdpkvav paaappacpp kaaangappa prlavssraa vvarmegaaq
       61 gglqtvmkwk tvvaifvvvv vylvtgglvf raleqpfess qkntialeka eflrdhicvs
      121 pqeletliqh aldadnagvs pignssnnss hwdlgsafff agtvittigy gniapstegg
      181 kifcilyaif giplfgflla gigdqlgtif gksiarvekv frkkqvsqtk irvistilfi
      241 lagcvvfvti pavifkyieg wtalesiyfv vvtlttvgfg dfvaggnagi nyrewykplv
      301 wfwilvglay faavlsmigd wlrvlskktk eevgeikaha aewkanvtae fretrrrlsv
      361 eihdklqraa tirsmerrrl gldqrahsld mlspekrsvf aaldagrcka ssqesidhrp
      421 nnlrlqasep lqkrgqgase dnivnklgsa srltkrknrd lrkalpedvh riyrtlrhys
      481 ldeekkeedt ekgcnsdhss tavltdcaql pagagdgvgp adakdaerds sallearn
//
LOCUS       XP_061014322             764 aa            linear   MAM 02-DEC-2023
DEFINITION  thyrotropin receptor isoform X1 [Dama dama].
ACCESSION   XP_061014322
VERSION     XP_061014322.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158339.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..764
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..764
                     /product="thyrotropin receptor isoform X1"
                     /calculated_mol_wt=86332
     Region          65..223
                     /region_name="LRR_5"
                     /note="BspA type Leucine rich repeat region (6 copies);
                     pfam13306"
                     /db_xref="CDD:463839"
     Region          78..102
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          103..127
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          128..152
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          153..177
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          180..201
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          202..229
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          267..288
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          415..689
                     /region_name="7tmA_TSH-R"
                     /note="thyroid-stimulating hormone receptor (or
                     thyrotropin receptor), member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15964"
                     /db_xref="CDD:320630"
     Region          416..442
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320630"
     Region          449..474
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320630"
     Site            order(470,473..474,494..499,501..502,505,550,552..556,578,
                     581..583,585..587,589..590,637,640..641,643..644,647,
                     656..657,659..661,664,667..668)
                     /site_type="other"
                     /note="putative peptide ligand binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:320630"
     Region          494..524
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320630"
     Region          536..558
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320630"
     Region          578..607
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320630"
     Region          617..647
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320630"
     Region          657..682
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320630"
     CDS             1..764
                     /gene="TSHR"
                     /coded_by="XM_061158339.1:48..2342"
                     /db_xref="GeneID:133067154"
ORIGIN      
        1 mrptpllrla lllvlpnslg gqrcpsppce crqeddfrvt ckeiqripsl ppstqtlkfi
       61 ethlktipsh afsnlpnisr iylsidatlq qleshsfynl skvthieirn trsltyidpg
      121 alkelpllkf lgifntglre fpdltkiyst dvffileitd npymtsipan afqglcnetl
      181 tlklynngft siqghafngt kldavylnkn kyltvidqda fagvysgptl ldlsytsvaa
      241 lpskglehlk eliarntwtl kklplslsfl hltradlsyp shccafknqk kirgifqslm
      301 cnessirglr qrksasalsg pfyqeyeegl gdgsagykes sqfqdthsns hyyvffeeqe
      361 deiigfgqel knpqeetlqa fdshydytvc ggsedmvctp ksdefnpced imgykslriv
      421 vwfvsllall gnvfvlvill tshykltvpr flmcnlafad fcmglyllli asvdlytqse
      481 yynhaidwqt gpgcntagff tvfaselsvy tltvitlerw yaitfamhld rkirlwhayv
      541 imlggwvccf llallplvgi ssyakvsicl pmdtetplal ayiilvllln ivafiivcac
      601 yvkiyitvrn phynpgdkdt riakrmavli ftdfmcmapi sfyalsalmn kplitvtnsk
      661 illvlfypln scanpflyai ftkafqrdvf illskfgick rqaqayrgqr vspknstsir
      721 vqkvppdvrq slpnvqdgye llenshqtpk qqdqtskeyk qtvl
//
LOCUS       XP_061014323             253 aa            linear   MAM 02-DEC-2023
DEFINITION  thyrotropin receptor isoform X2 [Dama dama].
ACCESSION   XP_061014323
VERSION     XP_061014323.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158340.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..253
                     /product="thyrotropin receptor isoform X2"
                     /calculated_mol_wt=28436
     Region          65..223
                     /region_name="LRR_5"
                     /note="BspA type Leucine rich repeat region (6 copies);
                     pfam13306"
                     /db_xref="CDD:463839"
     Region          78..102
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          103..127
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          128..152
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          153..177
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          180..201
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          202..223
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..253
                     /gene="TSHR"
                     /coded_by="XM_061158340.1:48..809"
                     /db_xref="GeneID:133067154"
ORIGIN      
        1 mrptpllrla lllvlpnslg gqrcpsppce crqeddfrvt ckeiqripsl ppstqtlkfi
       61 ethlktipsh afsnlpnisr iylsidatlq qleshsfynl skvthieirn trsltyidpg
      121 alkelpllkf lgifntglre fpdltkiyst dvffileitd npymtsipan afqglcnetl
      181 tlklynngft siqghafngt kldavylnkn kyltvidqda fagvysgptl lllfrrksls
      241 fetqrvphst vps
//
LOCUS       XP_061014324             151 aa            linear   MAM 02-DEC-2023
DEFINITION  neuroglobin [Dama dama].
ACCESSION   XP_061014324
VERSION     XP_061014324.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158341.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..151
                     /product="neuroglobin"
                     /calculated_mol_wt=16811
     Region          1..148
                     /region_name="Ngb"
                     /note="Neuroglobins; cd08920"
                     /db_xref="CDD:271272"
     Site            order(31,41..42,64,67..68,71,88,92,96,101,106,109)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:271272"
     CDS             1..151
                     /gene="NGB"
                     /coded_by="XM_061158341.1:68..523"
                     /db_xref="GeneID:133067156"
ORIGIN      
        1 merpepelir qswravsrsp lehgtvlfar lfdlepgllp lfqyhcrqfs spedclsspe
       61 fldhirkvml vidaavtnve dlssleeyla slgrkhravg vklssfstvg esllymlekc
      121 lgpaftpatr aawsqlygav vqamsrgwdg e
//
LOCUS       XP_061014325             263 aa            linear   MAM 02-DEC-2023
DEFINITION  palmitoyltransferase ZDHHC22 [Dama dama].
ACCESSION   XP_061014325
VERSION     XP_061014325.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158342.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..263
                     /product="palmitoyltransferase ZDHHC22"
                     /calculated_mol_wt=29248
     Region          91..218
                     /region_name="DHHC"
                     /note="DHHC palmitoyltransferase; pfam01529"
                     /db_xref="CDD:396215"
     CDS             1..263
                     /gene="ZDHHC22"
                     /coded_by="XM_061158342.1:199..990"
                     /db_xref="GeneID:133067157"
ORIGIN      
        1 mlalrllnvv apayflcial vtlvlqlflf lprmredpta arlfspallh galflflstn
       61 algnyvlviq nspddldacq gaearralcp ppsthfcrvc arvtlrhdhh cfftgncigs
      121 rnmrnfvlfc lytslaclys mvagvayisa vlsisfahpl afltllptsi sqffsgavlg
      181 semfvilmly lwfaiglaca gfcchqllli lrgqtrhqvr kgmavrarpw rknlqevfgk
      241 rwllgllvpm fnvgsesckq rdk
//
LOCUS       XP_061014326             263 aa            linear   MAM 02-DEC-2023
DEFINITION  palmitoyltransferase ZDHHC22 [Dama dama].
ACCESSION   XP_061014326
VERSION     XP_061014326.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158343.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..263
                     /product="palmitoyltransferase ZDHHC22"
                     /calculated_mol_wt=29248
     Region          91..218
                     /region_name="DHHC"
                     /note="DHHC palmitoyltransferase; pfam01529"
                     /db_xref="CDD:396215"
     CDS             1..263
                     /gene="ZDHHC22"
                     /coded_by="XM_061158343.1:91..882"
                     /db_xref="GeneID:133067157"
ORIGIN      
        1 mlalrllnvv apayflcial vtlvlqlflf lprmredpta arlfspallh galflflstn
       61 algnyvlviq nspddldacq gaearralcp ppsthfcrvc arvtlrhdhh cfftgncigs
      121 rnmrnfvlfc lytslaclys mvagvayisa vlsisfahpl afltllptsi sqffsgavlg
      181 semfvilmly lwfaiglaca gfcchqllli lrgqtrhqvr kgmavrarpw rknlqevfgk
      241 rwllgllvpm fnvgsesckq rdk
//
LOCUS       XP_061014327             471 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat-containing protein 74A [Dama dama].
ACCESSION   XP_061014327
VERSION     XP_061014327.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158344.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..471
                     /product="leucine-rich repeat-containing protein 74A"
                     /calculated_mol_wt=52447
     Region          <75..339
                     /region_name="RNA1"
                     /note="Ran GTPase-activating protein (RanGAP) involved in
                     mRNA processing and transport [Translation, ribosomal
                     structure and biogenesis]; COG5238"
                     /db_xref="CDD:444072"
     Region          146..174
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          175..202
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          203..223
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          231..258
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          259..282
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          283..314
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..471
                     /gene="LRRC74A"
                     /coded_by="XM_061158344.1:14..1429"
                     /db_xref="GeneID:133067160"
ORIGIN      
        1 mdndeplepe tkderdsvst pqssdetlyc eaeapvavek ekpaqesset dleiedtekf
       61 fttgqkelyl eacklvgvvp vsyfirnmee syvnlnhhgl gpngtkaiai alvsnttvlt
      121 leladncimq egilslveml qenyylqein vsdndlgleg arilseflqn ntsslfslql
      181 sgnnfkeesa elfcqalsnn yriksldlsh nqfcdkagey lgqmlainvg lqsldlswnh
      241 lyvrgtvalc nglrsnvslk kldlsmnsfg negaaalgev lrlnsyltyl dlssnnitnd
      301 glskisrale lneslkvlkl flnpismdga vllilsikrn pkskmedidi snvlvseqfv
      361 kildgvcaih pqldviyksv qalsakktpf twtnpvkliq syadqnkisi ldffrslnps
      421 gelmmpvgef rkamiqqnkv pinryqvrel ikklgektgm vdfsfltmtr s
//
LOCUS       XP_061014328             485 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: steroid hormone receptor ERR2 [Dama dama].
ACCESSION   XP_061014328
VERSION     XP_061014328.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158345.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..485
                     /product="LOW QUALITY PROTEIN: steroid hormone receptor
                     ERR2"
                     /calculated_mol_wt=53199
     Region          98..193
                     /region_name="NR_DBD_ERR"
                     /note="DNA-binding domain of estrogen related receptors
                     (ERR) is composed of two C4-type zinc fingers; cd07170"
                     /db_xref="CDD:143544"
     Site            order(101,113..116,121..122,124..126,128..129,132,
                     152..153,156,159,173..174,177..184)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143544"
     Site            order(103,106,120,123,139,145,155,158)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143544"
     Region          212..431
                     /region_name="NR_LBD_ERR"
                     /note="The ligand binding domain of estrogen
                     receptor-related nuclear receptors; cd06946"
                     /db_xref="CDD:132744"
     Site            order(240,243,247,250,288,301,305,315..317,410,413,415)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:132744"
     Site            order(255,269,272..273,276..277,423..424,427..428)
                     /site_type="other"
                     /note="coactivator recognition site [polypeptide binding]"
                     /db_xref="CDD:132744"
     Site            351
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:132744"
     CDS             1..485
                     /gene="ESRRB"
                     /coded_by="XM_061158345.1:1..1458"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:133067162"
ORIGIN      
        1 msaddrhlgs scgsfiktep sspssgidal shhspsgssd asggfglalg ahangldspp
       61 mfagaglggt pcrkgyedca gglmedsaik ceymlnaipk rlclvcgdia sgyhygvasc
      121 eackaffkrt iqgnieyscp atneceitkr rrkscqacrf mkclkvgmlk egvrldrvrg
      181 grqkykrrld sesspylslq isppakkplt kivsyllvae pdklyamppp gmpegdikal
      241 ttlcdladre lvviigwakh ipgfsnlslg dqmsllqsaw meililgivy rslpyddklv
      301 yaedyimdee hsrlagllel yrailqlvrr ykklkvekee fvtlkalala nsdsmyiedl
      361 eavqklqdll healqdyels qrheeprrtg kllltlpllr qtaakavqhf ysiklqgkvp
      421 mhklflemle akawaradsp lrlexhpggk apsphlitkr qhvhfvttsp tsplpsasth
      481 glggq
//
LOCUS       XP_061014329              67 aa            linear   MAM 02-DEC-2023
DEFINITION  small integral membrane protein 20-like [Dama dama].
ACCESSION   XP_061014329
VERSION     XP_061014329.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158346.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..67
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..67
                     /product="small integral membrane protein 20-like"
                     /calculated_mol_wt=7540
     Region          2..57
                     /region_name="DUF4538"
                     /note="Domain of unknown function (DUF4538); pfam15061"
                     /db_xref="CDD:405708"
     CDS             1..67
                     /gene="LOC133067163"
                     /coded_by="XM_061158346.1:1..204"
                     /db_xref="GeneID:133067163"
ORIGIN      
        1 msqnlhtali fggfisliga dfypiyfrpl mrleeykkeq ainragivqe dvqppglkvw
       61 sdpfgqk
//
LOCUS       XP_061014330             170 aa            linear   MAM 02-DEC-2023
DEFINITION  placenta growth factor isoform X1 [Dama dama].
ACCESSION   XP_061014330
VERSION     XP_061014330.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158347.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..170
                     /product="placenta growth factor isoform X1"
                     /calculated_mol_wt=19678
     Region          50..132
                     /region_name="PDGF"
                     /note="Platelet-derived and vascular endothelial growth
                     factors (PDGF, VEGF) family; smart00141"
                     /db_xref="CDD:197537"
     Site            order(50..53,87,89..92,107..108)
                     /site_type="active"
                     /note="receptor binding interface [active]"
                     /db_xref="CDD:238079"
     Site            order(52,83,87,94,128,130)
                     /site_type="other"
                     /note="cysteine knot motif"
                     /db_xref="CDD:238079"
     Site            order(77,86)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238079"
     CDS             1..170
                     /gene="PGF"
                     /coded_by="XM_061158347.1:319..831"
                     /db_xref="GeneID:133067164"
ORIGIN      
        1 mptmrlftcf lqlltglalp avppqqwals sgnisskvev vpfqrvwers ycqpverlvd
       61 ivseypseme hlfspscvsl vrctgccsde kmhcmpleta nitmqlmkyr aldlpffvem
      121 sfsqhvrcec rprwgktkpk rrrakvrgqr krkeqkhkdc hlcgdtlsrr
//
LOCUS       XP_061014331             166 aa            linear   MAM 02-DEC-2023
DEFINITION  placenta growth factor isoform X2 [Dama dama].
ACCESSION   XP_061014331
VERSION     XP_061014331.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158348.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..166
                     /product="placenta growth factor isoform X2"
                     /calculated_mol_wt=19187
     Region          50..127
                     /region_name="PDGF"
                     /note="Platelet-derived and vascular endothelial growth
                     factors (PDGF, VEGF) family; smart00141"
                     /db_xref="CDD:197537"
     Site            order(50..53,87,89..92,107..108)
                     /site_type="active"
                     /note="receptor binding interface [active]"
                     /db_xref="CDD:238079"
     Site            order(77,86)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238079"
     CDS             1..166
                     /gene="PGF"
                     /coded_by="XM_061158348.1:319..819"
                     /db_xref="GeneID:133067164"
ORIGIN      
        1 mptmrlftcf lqlltglalp avppqqwals sgnisskvev vpfqrvwers ycqpverlvd
       61 ivseypseme hlfspscvsl vrctgccsde kmhcmpleta nitmqlmkyr aldlpffvem
      121 sfsqhvrprw gktkpkrrra kvrgqrkrke qkhkdchlcg dtlsrr
//
LOCUS       XP_061014332             149 aa            linear   MAM 02-DEC-2023
DEFINITION  placenta growth factor isoform X3 [Dama dama].
ACCESSION   XP_061014332
VERSION     XP_061014332.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158349.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..149
                     /product="placenta growth factor isoform X3"
                     /calculated_mol_wt=17038
     Region          50..132
                     /region_name="PDGF"
                     /note="Platelet-derived and vascular endothelial growth
                     factors (PDGF, VEGF) family; smart00141"
                     /db_xref="CDD:197537"
     Site            order(50..53,87,89..92,107..108)
                     /site_type="active"
                     /note="receptor binding interface [active]"
                     /db_xref="CDD:238079"
     Site            order(52,83,87,94,128,130)
                     /site_type="other"
                     /note="cysteine knot motif"
                     /db_xref="CDD:238079"
     Site            order(77,86)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238079"
     CDS             1..149
                     /gene="PGF"
                     /coded_by="XM_061158349.1:319..768"
                     /db_xref="GeneID:133067164"
ORIGIN      
        1 mptmrlftcf lqlltglalp avppqqwals sgnisskvev vpfqrvwers ycqpverlvd
       61 ivseypseme hlfspscvsl vrctgccsde kmhcmpleta nitmqlmkyr aldlpffvem
      121 sfsqhvrcec rprwgktkpk rcgdtlsrr
//
LOCUS       XP_061014333             145 aa            linear   MAM 02-DEC-2023
DEFINITION  placenta growth factor isoform X4 [Dama dama].
ACCESSION   XP_061014333
VERSION     XP_061014333.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158350.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..145
                     /product="placenta growth factor isoform X4"
                     /calculated_mol_wt=16546
     Region          50..127
                     /region_name="PDGF"
                     /note="Platelet-derived and vascular endothelial growth
                     factors (PDGF, VEGF) family; smart00141"
                     /db_xref="CDD:197537"
     Site            order(50..53,87,89..92,107..108)
                     /site_type="active"
                     /note="receptor binding interface [active]"
                     /db_xref="CDD:238079"
     Site            order(77,86)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238079"
     CDS             1..145
                     /gene="PGF"
                     /coded_by="XM_061158350.1:319..756"
                     /db_xref="GeneID:133067164"
ORIGIN      
        1 mptmrlftcf lqlltglalp avppqqwals sgnisskvev vpfqrvwers ycqpverlvd
       61 ivseypseme hlfspscvsl vrctgccsde kmhcmpleta nitmqlmkyr aldlpffvem
      121 sfsqhvrprw gktkpkrcgd tlsrr
//
LOCUS       XP_061014334             238 aa            linear   MAM 02-DEC-2023
DEFINITION  synapse differentiation-inducing gene protein 1-like [Dama dama].
ACCESSION   XP_061014334
VERSION     XP_061014334.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158351.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..238
                     /product="synapse differentiation-inducing gene protein
                     1-like"
                     /calculated_mol_wt=25705
     Region          157..217
                     /region_name="CD225"
                     /note="Interferon-induced transmembrane protein;
                     pfam04505"
                     /db_xref="CDD:461336"
     CDS             1..238
                     /gene="SYNDIG1L"
                     /coded_by="XM_061158351.1:298..1014"
                     /db_xref="GeneID:133067165"
ORIGIN      
        1 meslselqnp llprspthlh gpypypeasp awpcrekiys yllggadpah ahqlldpgsl
       61 qlaveawyrp scllgrdkvk epragscets ftegreplag pmerstepgq aeedvaiqtv
      121 sygvqeelqg qegdpeeees datstesese dnfltlpprd hlgltifsml ccfwplgiaa
      181 fyfsqgtska iskgdfrlan ttsrralfla tlsiavgagl yvavvvalaa ymsqnghg
//
LOCUS       XP_061014335             693 aa            linear   MAM 02-DEC-2023
DEFINITION  vertnin [Dama dama].
ACCESSION   XP_061014335
VERSION     XP_061014335.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158352.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..693
                     /product="vertnin"
                     /calculated_mol_wt=76403
     Region          74..241
                     /region_name="OTU_VRTN"
                     /note="OTU (ovarian tumor) domain of vertnin and similar
                     proteins; cd22791"
                     /db_xref="CDD:438612"
     Site            order(85,160,163,170..173,198,200,210,212..213)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438612"
     Region          <422..632
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..693
                     /gene="VRTN"
                     /coded_by="XM_061158352.1:1..2082"
                     /db_xref="GeneID:133067166"
ORIGIN      
        1 masreqlvqh vlqelqeave segleglvga aleakqvlss falptrrggg pgpqvlevds
       61 valslypeda prnmlplvcq gegsllfeaa slllwgdagl slelrartvv emllhrhyyl
      121 qgmidskvml qavryslrse espemtslps atleaifdad vkatcfpssf snvwhlyala
      181 svvqrniysi yplrnlkirp yfnrvirprr cdhtpatlhi mwagqplsgh lfrhqyfapv
      241 vgleeveaes ahpgpaktle llnrepglsy splgerssvt rstvyrwrrq sqehrqkaaa
      301 rfsakhflqd sfhrggvvpl qqflqrfpei srstyyawkh elvgsgtcra lppaeelakl
      361 perpvaeglg csstavsspg mvfmqrakmy lehcialntl vpyrcfkrrf pgisrstyyn
      421 wrrkalrrnp sfkpgpalse sgppqpapvg ekvllpwqgg eagegaakat gggppasraf
      481 lplrvplsrw qrrlrraark qvlgghlpfc rfrlrypsls pssfwvwksl arswpgspsk
      541 lqiraptlgr ggrkeaeekq agrnvtaala psagtrqmaa spgedpgkap ggpsgegalq
      601 egptaqgrpp ggslsshpvv raaaggrdsq alvmdmlatt kfkaqaklfl qkrfqsksfp
      661 sykefstlfp ltarstyymw kralydgltl vdg
//
LOCUS       XP_061014336             698 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 177 [Dama dama].
ACCESSION   XP_061014336
VERSION     XP_061014336.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158353.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..698
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..698
                     /product="coiled-coil domain-containing protein 177"
                     /calculated_mol_wt=78849
     Region          324..697
                     /region_name="DUF4659"
                     /note="Domain of unknown function (DUF4659); pfam15558"
                     /db_xref="CDD:464768"
     CDS             1..698
                     /gene="CCDC177"
                     /coded_by="XM_061158353.1:1..2097"
                     /db_xref="GeneID:133067169"
ORIGIN      
        1 mvdpvpeeek lgaepggseg deaaasvppd sqgaqqptas sasasavapr kaevpsaaeg
       61 gqreqspllh ldlfnfdcpe aegsryvlts prsleacarc avkpvellpr aladlvreap
      121 grsmrvatgl yeayeaerra klqqcraere rivreekrrl ftplgpaaaa asapsagsss
      181 scssaslpas papraarkas sspsparpqp ppagpragrk shsldslsrr regalssesg
      241 assssysges lrelhwppra sarnscaags aasapnplgr psalalvplt grsfslgdls
      301 hspqtaqhve rivrqvraer glrgvperdr kiaalmlarh qeerllleqr aaahgqweqq
      361 rvraeqrrer eerekqrale qgrrawaaqv eerrgrrgre ereearrrqr qcerseerrr
      421 elaerqgllr rerveraare drqrklqqeq nlkqreeglq evreraeqar rerakraaqv
      481 kqqqegqlqr ekrelsraer arheallkgr arqerqereg lrssleaslg raqenyeqlv
      541 eqrtrelrer arreelqgrr akeaaerker ehqahleala ragerrlqha aqaaeeavqr
      601 karrvgqsrm ekeraqrank ekverdedcr rrellqaigr klerseqlsr errsalesar
      661 starasfhvr ekvrqetntr sfdrmvreaq lhanldrk
//
LOCUS       XP_061014337             506 aa            linear   MAM 02-DEC-2023
DEFINITION  pleckstrin homology domain-containing family D member 1 [Dama
            dama].
ACCESSION   XP_061014337
VERSION     XP_061014337.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158354.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..506
                     /product="pleckstrin homology domain-containing family D
                     member 1"
                     /calculated_mol_wt=59014
     Region          18..156
                     /region_name="PH_PLEKHD1"
                     /note="Pleckstrin homology (PH) domain containing, family
                     D (with coiled-coil domains) member 1 PH domain; cd13281"
                     /db_xref="CDD:270099"
     Region          <146..>391
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..506
                     /gene="PLEKHD1"
                     /coded_by="XM_061158354.1:65..1585"
                     /db_xref="GeneID:133067170"
ORIGIN      
        1 mftsksnsvs pspsleqads daldistkvq lygvlwkrsf grtsakwsrr ffiikesfll
       61 yysesekksf etnkyfnihp kgviplggcl veakeepsmp yamkishqdf hgtillaaes
      121 efeqtqwlem lqesgkvtwk naqlgeamik sleaqglqla kekqeyldkl meeteelclq
      181 reqrealerl nqvleaekqq feevvqelrm eqeqikrele ltarclkgve qekkelrhft
      241 eslqqtleel siekkktlem leenenqlqt lanqseqppp sgglhsnlrq ieekmqqlle
      301 ekllaekrmk eneersrale eerefyssqs qalqnslqel tvekqqaere lkaevkvrmd
      361 lerrlreaeg alrsleqgln skvrnkekee rmradvshlk rffeecirna eleakmpvim
      421 knsvyihkaa trrikscrfh rrrsstswnd vkpsqsfmts qleannmeel kevakrlsrd
      481 qrfresiyhi matqpgapsa lprggk
//
LOCUS       XP_061014339             297 aa            linear   MAM 02-DEC-2023
DEFINITION  putative coiled-coil domain-containing protein 196 [Dama dama].
ACCESSION   XP_061014339
VERSION     XP_061014339.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158356.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..297
                     /product="putative coiled-coil domain-containing protein
                     196"
                     /calculated_mol_wt=34951
     CDS             1..297
                     /gene="CCDC196"
                     /coded_by="XM_061158356.1:1..894"
                     /db_xref="GeneID:133067172"
ORIGIN      
        1 mtsasnspes ylssktrssk lddnylkeln edlklrkqel leilkpledk nnllfqklms
       61 nleekqrslq imreimagke nddssvielv keaeemkqnl erknkmlrke memlwnktfn
      121 teefsdeerv lqiknksdsq dgkapktpss srktknelet lyaekvkeir kekkqrkmew
      181 vryqeqanii qndfngkvie lriealknyq kandlklsly iqqnfepkqa flnlprsqgt
      241 vdtttmrret tcknesnvri lgsktyteqq rakgsqfddt rgrlfflrsr pdevlkd
//
LOCUS       XP_061014340            2331 aa            linear   MAM 02-DEC-2023
DEFINITION  spectrin beta chain, erythrocytic [Dama dama].
ACCESSION   XP_061014340
VERSION     XP_061014340.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158357.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2331
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2331
                     /product="spectrin beta chain, erythrocytic"
                     /calculated_mol_wt=268405
     Region          40..156
                     /region_name="CH_SPTB-like_rpt1"
                     /note="first calponin homology (CH) domain found in the
                     beta-I spectrin-like subfamily; cd21246"
                     /db_xref="CDD:409095"
     Site            order(41,44..45,48..49,52..53,56,110,113..114,117,124,
                     129..137,144..145,147..148,151..152,155..156)
                     /site_type="other"
                     /note="actin binding site [polypeptide binding]"
                     /db_xref="CDD:409095"
     Region          170..281
                     /region_name="CH_SPTB_rpt2"
                     /note="second calponin homology (CH) domain found in
                     spectrin beta chain, erythrocytic (SPTB) and similar
                     proteins; cd21319"
                     /db_xref="CDD:409168"
     Site            order(175,179,229,231..232,235,242,247..255,264..265,
                     267..268,271..272,275)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409168"
     Region          302..411
                     /region_name="Spectrin"
                     /note="Spectrin repeat; pfam00435"
                     /db_xref="CDD:395348"
     Site            413..418
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          422..525
                     /region_name="Spectrin"
                     /note="Spectrin repeat; pfam00435"
                     /db_xref="CDD:395348"
     Region          529..741
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            636..641
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          638..848
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            742..747
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          745..954
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            847..852
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          955..1168
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1060..1065
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1170..1379
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1273..1278
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1386..1475
                     /region_name="SPEC"
                     /note="Spectrin repeats; smart00150"
                     /db_xref="CDD:197544"
     Region          1485..1690
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1583..1588
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1691..1901
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1796..1801
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1904..>2070
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            2008..2013
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          2184..2289
                     /region_name="PH_beta_spectrin"
                     /note="Beta-spectrin pleckstrin homology (PH) domain;
                     cd10571"
                     /db_xref="CDD:269975"
     Site            order(2191,2204..2206,2252)
                     /site_type="other"
                     /note="non-cannonical phosphoinositide binding site
                     [chemical binding]"
                     /db_xref="CDD:269975"
     CDS             1..2331
                     /gene="SPTB"
                     /coded_by="XM_061158357.1:7..7002"
                     /db_xref="GeneID:133067174"
ORIGIN      
        1 mtsatelenv gnqppysrin arwdgpddel dndnssarlf ersrikalad erevvqkktf
       61 tkwvnshlar vscritdlyk dlrdgrmlik llevlsgeml pkptkgkmri hclenvdkal
      121 qflreqrvhl enmgshdivd gnhrlvlgli wtiilrfqiq divvqtqegr etrsakdall
      181 lwcqmktagy phvnvtnfts swkdglafna lihkhrpdli dfdklkdsna rhnlehafev
      241 aerqlgiipl ldpedvften pdeksiityv vafyhyfskm kvlavegkrv gkvidhaiet
      301 ekmiekysgl asdlltwieq titvlnsrkf anslagvqqq lqafstyrti ekppkfqekg
      361 nlevllftiq srmrannqkv ytphdgklvs dinrawesle eaeyqrelal rgelirqekl
      421 eqlarrfdrk aamretwlne nqrlvaqdnf gydlaaveaa kkkheaietd taayeervra
      481 ledlaqelel enyhdqkrit arkdnilrlw dylqellgar rqrlektldl qklfqdmlhs
      541 idwmdgikah llsaefgkhl levedllqkh klmeadiaiq gdkvkaitta tlqftegsgy
      601 qpcdpqvird rvshlekcfe elsntaagrk aqleqskqlc kffwemdeae swikekeqiy
      661 ssldygkdlt svlilqrkhk afedelrgld ahldqifrea edmvarkqfg herievrikk
      721 vsdqwnelkd laafckknlq dtenffqfqg daddlkawlq dahrllsged vgqdegatra
      781 lgkkhkdfle eleesrgvmq hleqqardfp pgfqdspdvt nrlqalrdly qqvvaqadmr
      841 rqrlqdaldl ytvfgetdac llwmgekekw laqmeipdtl edlevvqhrf dildqemktl
      901 mtqidgvnla anslvesnhp rsaevkkcqd nlntrwqdfq tmvserreav dsalrvhnyc
      961 vdceetgkwi vdktkvvest kdlgrdlagv iaiqrklsgl erdvaaiqtr lgmlereshr
     1021 lmdshpelkt dieqrqayle elwqglkqal ksqeaslgea sqlqaflqdl dafqawlstt
     1081 qkdvaskdmp eslpeaeqll qqhaaikddi drheesyqkv rvsgekvthg qtdpeylllg
     1141 qrldglekgw dalsrmwesr sqaltqclgf qefqkdakqa eailsnqeyt lahleppdsl
     1201 eaaeagirkf edflvsmenn rdkvlspvds gnklvaegnl ysdkikekvq liedrhrknn
     1261 ekaqeasell kdnlelqnfl qncqeltlwi ndklltsqdv sydearnlhn kwlkhqafva
     1321 elashqgwle nldaegkqlm eekpqfaalv sqklealhrl wdelqantqe taqrlsaars
     1381 sdlrsqtqad lnkwiramed qlqsddlgkd ltsvnrmlak lkrvedqvnv rkeeleelfa
     1441 qmpslgeeag dedlsiekrf ldlleplgrr kkqlessrak lqisrdlede tlwveerlpl
     1501 aqstdygtnl qtvqlfmkkn qtlqneiqgh tprvedvlhr gqqlvaaaei dcqdveerlg
     1561 qlqgswdtlr qaaagrlqrl reaseaqqyy ldageaeawi geqefyvfsd enpqdeesai
     1621 vmlkrhlrqq raveeygrni kqlagraqgl lstghpegeq iirlqgqvdk qyaglkdmae
     1681 errrklenmy hlfqlkrevd dleqwitekd tvasssemgq dfdhvtvlrd kfrdfaretg
     1741 aigqervdnv navierlida ghseaatiae wkdglnemwa dllelidtrm qllaasydlq
     1801 ryfytgseil glidekhrel pedvgldast aesfhrvhta ferelhllge qvqqfqdvaa
     1861 rlqtayagek adiiqnkeqe vsaawqalld acagrrtqlv dtadkfrffs mvrdllswmd
     1921 siirqietqe kprdvssvel lmkyhqgiqa eietrsknfs tclelgesll qrqhqasdei
     1981 rekleqvvsr reemkekwea rwerlrllle vcqffrdasv aeawliaqep ylasrdyght
     2041 vdsveklikr heafeksaas weerfaalek pttlelkerq tperteeepg lqeeegetag
     2101 eaprgphrat tertspgeed rpwpqdlqpp pppgphedgq eeksstderp ateplfkvld
     2161 tplsegdept tlpaqqdrgh svqmegflgr khdlegpnkk asnrswnnly cvlrnselaf
     2221 ykdaknlalg vpyhgeepla lrhaiceiaa nykkkkhvfk lrlsngsewl fhgkdeeeml
     2281 swlqgvstai nesqsirvka qslplppitg pdaslgkkdk ekrfsffpkk k
//
LOCUS       XP_061014341             128 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin-ribosomal protein eL40 fusion protein-like [Dama dama].
ACCESSION   XP_061014341
VERSION     XP_061014341.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158358.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..128
                     /product="ubiquitin-ribosomal protein eL40 fusion
                     protein-like"
                     /calculated_mol_wt=14581
     Region          1..76
                     /region_name="Ubl_ubiquitin"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin;
                     cd01803"
                     /db_xref="CDD:340501"
     Site            order(6..9,11,34..37,40,42,44,46..49,68..76)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:340501"
     Site            order(8..12,31..35,40,42,44,46..49,68,70..76)
                     /site_type="other"
                     /note="E1 interaction site [polypeptide binding]"
                     /db_xref="CDD:340501"
     Region          79..126
                     /region_name="Ribosomal_L40e"
                     /note="Ribosomal L40e family; pfam01020"
                     /db_xref="CDD:395807"
     CDS             1..128
                     /gene="LOC133067175"
                     /coded_by="XM_061158358.1:34..420"
                     /db_xref="GeneID:133067175"
ORIGIN      
        1 mqifvktltg ktitleveps dtienvkaki qnkegippdq qrlifagkql edgrtlsdyn
       61 iqkestlhlv lrlrggiiep slrqlaqkyn cdkmicrkcy arphpravnc rkkkcghtnn
      121 lrpkkevk
//
LOCUS       XP_061014342             130 aa            linear   MAM 02-DEC-2023
DEFINITION  glycoprotein hormone beta-5 [Dama dama].
ACCESSION   XP_061014342
VERSION     XP_061014342.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158359.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..130
                     /product="glycoprotein hormone beta-5"
                     /calculated_mol_wt=14155
     Region          36..129
                     /region_name="GHB_like"
                     /note="Glycoprotein hormone beta chain homologues;
                     cd00069"
                     /db_xref="CDD:200450"
     Site            order(36,60,64,84,115,117)
                     /site_type="other"
                     /note="cysteine knot motif"
                     /db_xref="CDD:200450"
     Site            order(43,46,59..72,83..84,120,122,125..129)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:200450"
     Site            order(72,122..123,126,128..129)
                     /site_type="other"
                     /note="receptor binding site [polypeptide binding]"
                     /db_xref="CDD:200450"
     CDS             1..130
                     /gene="GPHB5"
                     /coded_by="XM_061158359.1:1..393"
                     /db_xref="GeneID:133067177"
ORIGIN      
        1 mrlvclilgp taflllagcg cvvstssrdl rtfvgcavre ftflakkpgc rglrittdac
       61 wgrcetwekp ileppyieah hrvctynetk qvtvklpnca pgvdpfytyp vavrcdcgac
      121 statteceti
//
LOCUS       XP_061014343             988 aa            linear   MAM 02-DEC-2023
DEFINITION  potassium voltage-gated channel subfamily H member 5 [Dama dama].
ACCESSION   XP_061014343
VERSION     XP_061014343.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158360.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..988
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..988
                     /product="potassium voltage-gated channel subfamily H
                     member 5"
                     /calculated_mol_wt=111639
     Region          39..132
                     /region_name="PAS_9"
                     /note="PAS domain; pfam13426"
                     /db_xref="CDD:463873"
     Region          217..>616
                     /region_name="PLN03192"
                     /note="Voltage-dependent potassium channel; Provisional"
                     /db_xref="CDD:215625"
     Region          551..>701
                     /region_name="Crp"
                     /note="cAMP-binding domain of CRP or a regulatory subunit
                     of cAMP-dependent protein kinases [Signal transduction
                     mechanisms]; COG0664"
                     /db_xref="CDD:440428"
     CDS             1..988
                     /gene="KCNH5"
                     /coded_by="XM_061158360.1:1..2967"
                     /db_xref="GeneID:133067178"
ORIGIN      
        1 mpggkrglva pqntfleniv rrssessfll gnaqivdwpv vysndgfckl sgyhradvmq
       61 ksstcsfmyg eltdkktiek vrqtfdnyes ncfevllykk nrtpvwfymq iapirnehek
      121 vvlflctfkd itlfkqpied dstkgwtkfa rltraltnsr svlqqltpmn ktevvhkhsr
      181 laevlqlgsd ilpqykqeap ktpphiilhy cafkttwdwv ililtfytai mvpynvsfkt
      241 kqnniawlvl dsvvdviflv divlnfhttf vgpggevisd pklirmnylk twfvidllsc
      301 lpydiinafe nvdegisslf sslkvvrllr lgrvarkldh yleygaavlv llvcvfglva
      361 hwlaciwysi gdyevidevt ntiqidswly qlalsigtpy ryntsagmwe ggpskdslyv
      421 sslyftmtsl ttigfgniap ttdvekmfsv ammmvgslly atifgnvtti fqqmyantnr
      481 yhemlnnvrd flklyqvpkg lservmdyiv stwsmskgid tekvlsicpk dmradicvhl
      541 nrkvfnehpa frlasdgclr alavefqtih capgdliyha gesvdalcfv vsgsleviqd
      601 devvailgkg dvfgdifwke ttlahacanv raltycdlhi ikreallkvl dfytafansf
      661 srnltltcnl rkriifrkis dvkkeeeerl rqknevtlsi pvdhpvrklf qkfkqqkelr
      721 nqgstqsdpe rnqlqvesrs lqngapitgt svvtvsqitp iqtslayvkt geslkqnnrd
      781 amelkpggga dpkclkvnsp irmkngngkg wlrlknnmga heekkedwnn vtkaesmgll
      841 sedpkgsdse nsvtknplrk tdscdsgitk sdlrldkage arsplehspi qadakhpfyp
      901 ipeqalqttl qevkhelked iqllscrmta lekqvaeilk ilseksappi sspksqmplq
      961 vppqipcqdi fsvsrpespe sdkdeihf
//
LOCUS       XP_061014344             645 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: synaptotagmin-16 [Dama dama].
ACCESSION   XP_061014344
VERSION     XP_061014344.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158361.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..645
                     /product="LOW QUALITY PROTEIN: synaptotagmin-16"
                     /calculated_mol_wt=71381
     Region          350..473
                     /region_name="C2A_Synaptotagmin-14_16"
                     /note="C2A domain first repeat present in Synaptotagmins
                     14 and 16; cd08389"
                     /db_xref="CDD:176035"
     Region          506..643
                     /region_name="C2B_Synaptotagmin-14_16"
                     /note="C2 domain second repeat present in Synaptotagmins
                     14 and 16; cd08408"
                     /db_xref="CDD:176053"
     CDS             1..645
                     /gene="SYT16"
                     /coded_by="XM_061158361.1:1..1938"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:133067181"
ORIGIN      
        1 mllamasqda qnffqplssw isrvyealqq agdtlsallv nfskqdskls nmldqdlndt
       61 qiletcsege ekgtdrcqen tdslflegdp fsccnsdlqd sgqsssprls qyaknscsim
      121 tlwpsqtldd qkpphvlssi veexhhlekq rgslqhgfds hlsgilenvn gkkqvnrfgd
      181 deelstssds deevikqfei svsrsqsfcs gasekgkqtg lehkpkpshr lsthkedste
      241 vstckgldga sqltysenls ygdddpisah sqspcelgnt rhhggspget svvhslsrqs
      301 tegslemeta fnnrgfedsy atdsssvwsp eeqdgtnfqv ppgvpepisk cgdldvifey
      361 raasqkltvt ivraqglpdk drsgvnswqv hvvllpskkq rgrtsiqrgp npifkekvtf
      421 akveprdvta svvrfrlyaa rkmtrermmg erlfylshlh qdgemkvtlv leprsnissg
      481 esplspsavs hsdsasstqs lshggapell vglsynattg rlsvemikgs hfrnlavnra
      541 pdtygklflf nsvgqemsrc ktsirrgqpn pvyketfvfq valfqlsdvt lmisvynrrt
      601 mkrkevigwi algqnssgee erdhwgemke nkgqqvcrwh mlles
//
LOCUS       XP_061014346             246 aa            linear   MAM 02-DEC-2023
DEFINITION  homeobox protein SIX6 [Dama dama].
ACCESSION   XP_061014346
VERSION     XP_061014346.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158363.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..246
                     /product="homeobox protein SIX6"
                     /calculated_mol_wt=27614
     Region          9..122
                     /region_name="SIX1_SD"
                     /note="Transcriptional regulator, SIX1, N-terminal SD
                     domain; pfam16878"
                     /db_xref="CDD:465293"
     Region          130..178
                     /region_name="homeodomain"
                     /note="Homeodomain; DNA binding domains involved in the
                     transcriptional regulation of key eukaryotic developmental
                     processes; may bind to DNA as monomers or as homo- and/or
                     heterodimers, in a sequence-specific manner; cd00086"
                     /db_xref="CDD:238039"
     Site            order(131,134,174,177..178)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     CDS             1..246
                     /gene="SIX6"
                     /coded_by="XM_061158363.1:79..819"
                     /db_xref="GeneID:133067183"
ORIGIN      
        1 mfqlpilnfs pqqvagvcet leesgdverl grflwslpva paacealnkn esvlraraiv
       61 afhggnyrel yhilenhkft keshaklqal wleahyqeae klrgrplgpv dkyrvrkkfp
      121 lprtiwdgeq kthcfkertr hllrewylqd pypnpskkre laqatgltpt qvgnwfknrr
      181 qrdraaaakn rlqqqvlsqg ssrtlraeee gtpevlgaaa spaaslsska aasaisitss
      241 dsecdi
//
LOCUS       XP_061014347             586 aa            linear   MAM 02-DEC-2023
DEFINITION  protein SIX6OS1 [Dama dama].
ACCESSION   XP_061014347
VERSION     XP_061014347.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158364.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..586
                     /product="protein SIX6OS1"
                     /calculated_mol_wt=68220
     Region          31..586
                     /region_name="S6OS1"
                     /note="Six6 opposite strand transcript 1 family;
                     pfam15676"
                     /db_xref="CDD:464795"
     CDS             1..586
                     /gene="C12H14orf39"
                     /coded_by="XM_061158364.1:1..1761"
                     /db_xref="GeneID:133067184"
ORIGIN      
        1 mndslfvsld rlllefvfqy eqdistkedi vqrinkcfed ikeckatvck ihetinttde
       61 eighyckhsk eikdncsswk ptcdvfhkhe dymqeqfiiy qetiekdkki yhgyicqykd
      121 vlkqyqlkys etplsheyye kkreyeeikn rvlacteqlk mnenifmefl vpapfpslts
      181 wtlhmvnlry ktqdilkhan qfskrscdlk keiddmeiei nylnqqiarh yemknlpetl
      241 eeknknvekr kelkertfek dpqpvlmlnk tpqnsqlflp yesqklvkpi kmhsseprvi
      301 dkkeessvrq skpanvdfkq kendacvlnd savnnhpkct hvtafknsqn vmqfrlvtpq
      361 kqsncnqwle krdtdaecgd ketirqlpes kcasqityae hfgkpiesns deveeragif
      421 prtpeiplfl rtpedvktpd sveklpktps femnknrdma tesqtqkdsp gfsflmsyts
      481 rspglnlfds svfdseissh qvseryssgn lnplssqqei gnlfgkpere daftfsfpsd
      541 ssthtfgagr ddfsfpfsfe qdqnsalssv kgfssssqnt tqftff
//
LOCUS       XP_061014348            1498 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat-containing protein 9 [Dama dama].
ACCESSION   XP_061014348
VERSION     XP_061014348.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158365.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1498
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1498
                     /product="leucine-rich repeat-containing protein 9"
                     /calculated_mol_wt=171663
     Region          55..236
                     /region_name="PPP1R42"
                     /note="protein phosphatase 1 regulatory subunit 42;
                     cl42388"
                     /db_xref="CDD:455733"
     Region          78..99
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          100..121
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          122..143
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          144..166
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          192..223
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          609..1054
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          698..717
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          718..739
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          740..761
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          762..815
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          789..800
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          816..874
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          875..910
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          888..1059
                     /region_name="PPP1R42"
                     /note="protein phosphatase 1 regulatory subunit 42;
                     cl42388"
                     /db_xref="CDD:455733"
     Region          911..932
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          933..954
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          955..978
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1001..1025
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1026..1053
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1054..1094
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1116..1361
                     /region_name="PPP1R42"
                     /note="protein phosphatase 1 regulatory subunit 42;
                     cl42388"
                     /db_xref="CDD:455733"
     Region          1141..1166
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1167..1203
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1204..1227
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1228..1249
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1250..1273
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1274..1295
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1296..1320
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1498
                     /gene="LRRC9"
                     /coded_by="XM_061158365.1:1..4497"
                     /db_xref="GeneID:133067185"
ORIGIN      
        1 miesenvnqh diikelclcn glsyemigqe gsdtsklemf fsgyprivgl slfpnltslt
       61 vvaqdvkeis gletclqlke lwiaecciek igglqecrsl eklylyynki skienlekls
      121 rlevlwlnhn aikyieglqt lknlsdlnla gnlissigrc ldpnehlerl nlsgnqiysf
      181 kdltnltrlr hlkdlclndp qyktnpvcll cnysthvlyh lpclqrldti dvspkqikel
      241 adttamkkim yynmriktvq rhlnedlekl ndrkcklqkl peeriklfnf lkknlerelt
      301 elkgsgkahn drpsnnkvpe lekskicetv seepslqqki vtklnalner vtfwnkklde
      361 ieaiyrievk rkkkshslli pfllieletv gnihfeegtr sddwfnscye lilsrfctwd
      421 frtygitgvk vkrvikvnnr ilrlkfeekf qkfldnehmh dsesyqkmle clfyvfdpei
      481 tvkkkhllqi lekgfkdset sklplrkeav ilanslsice cpriellqqk ykdekknsle
      541 helfrhgill itkvflgqsv qardqdsisq anypminsvf iprkyllnsi mgqrncdcsv
      601 rqckwfvfdh dlvlpeyive feyitvvkah slfssfnnii leeskknseg svlsqdlkfd
      661 dqvikmdpri kprpklmsld dktilslakt svyghivsln lhgnslsklr dlskltglrk
      721 lnisfneftc lddvyhlynl eyldashnhv itlegfrglm klkhldlswn qlkksgdein
      781 mlckhttsll tldirhnpwq kpatlrlsvi grlktlthld gvliseeeat aamkfisgtk
      841 itqlsllrhs stkeerpril stwpsakilt qtsklgphsh msgnwylkit alnldgqhlf
      901 eitnleklen lkwasfsnnn ltkmeglesc vnleeltldg nciskiegis kltkltrlsi
      961 nnnlltglek htfdnmlhlh slslennrit slsglqkaft lielyvsnny ialnqeiynl
     1021 kglcnlvild mygniivwnq enyrlfvifh lpelkaldgi siepaeteca kdlfggrlts
     1081 dmiaerqghs nftqmqelnw tsssirtvdl ipvdqfrnvc nvnlqnnnlt sfsgliylpn
     1141 vkvlclnynh iesiiprlkp qthltsrqll yqkvpssgyg qqgtskinrd ttssenlppi
     1201 mnslevlhlg yngicnliql qlnrlrnlkf lflqgneisq iegldnlevl qelvvdhnri
     1261 rafndsafak pssllalhle enrlrelskl qplvkleklf lgynkiqdma elekldgiss
     1321 lreltvygnp icrkmlhrhv lifrlpnlqm ldgipvnsdd rakaefhfse lqakknsfip
     1381 vtsspvdgas fsqvkappik itnvilpggf shylgsdftl tpevedkkak nagmltnnpr
     1441 sihaeiafrq lrginlspsl lshqacdvpm aspsaqmyqs nqdegripgs hfsrsnrm
//
LOCUS       XP_061014349             497 aa            linear   MAM 02-DEC-2023
DEFINITION  G-protein coupled receptor 135 [Dama dama].
ACCESSION   XP_061014349
VERSION     XP_061014349.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158366.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..497
                     /product="G-protein coupled receptor 135"
                     /calculated_mol_wt=51328
     Region          121..403
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          140..162
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320340"
     Region          189..211
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320340"
     Region          232..248
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320340"
     Region          280..303
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320340"
     Region          335..357
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320340"
     Region          371..396
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320340"
     CDS             1..497
                     /gene="GPR135"
                     /coded_by="XM_061158366.1:1..1494"
                     /db_xref="GeneID:133067187"
ORIGIN      
        1 meeqpppppv rppvstalsg sphpgapspa gtpggtssaa taaavlsfst aaaaalgnrs
       61 dvsgadstga aaggglggrg aagaagrprl gpeaapllph gaavaaqalv lllifllssl
      121 gncavmgaiv khrqlrtvtn afilslslsd lltallclpa afldlftppg gsapaaaaaa
      181 agpwsgfcaa srffsscfgi vstlsvalis ldrycaivrp prekigrrra lqllagawla
      241 algfslpwel llapgeapaa aqsfhrclyr tspdpaqlga aysvglvvac yllpfllmcf
      301 chyhicktvr lsdvrvrplt tyarvlrffs dvrtattvli mivsviccwg pycflvllaa
      361 arraqaaqsp sllnvvavwl twangainpv iyavrnpnis mllgrnreeg yrtrnvdall
      421 pnqgralqag slnplrnryt nrlgacstis ssnptsgvag dmamwarknp vvlfcregpp
      481 dpvtaaakqs gagdtsl
//
LOCUS       XP_061014351             485 aa            linear   MAM 02-DEC-2023
DEFINITION  solute carrier family 35 member F4 [Dama dama].
ACCESSION   XP_061014351
VERSION     XP_061014351.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158368.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..485
                     /product="solute carrier family 35 member F4"
                     /calculated_mol_wt=53526
     Region          <238..438
                     /region_name="RhaT"
                     /note="Permease of the drug/metabolite transporter (DMT)
                     superfamily [Carbohydrate transport and metabolism, Amino
                     acid transport and metabolism, General function prediction
                     only]; COG0697"
                     /db_xref="CDD:440461"
     CDS             1..485
                     /gene="SLC35F4"
                     /coded_by="XM_061158368.1:1..1458"
                     /db_xref="GeneID:133067192"
ORIGIN      
        1 mdvkaapngv atiedrilri tgyygyypgy ssqkstsrss vtrckpganc psshssisrq
       61 lsplsvteds sapilelqsr gssgvcghra erqnrsgddg aqthpenssq enrikarcls
      121 cmsmvlkavw glliilsvss swvgttqivk ityknfycpf fmtwfstnwn imffpvyysg
      181 hlataqekqs pmkkfrecsr ifgedgltlk lflkrtapfs ilwtltnyly llalkkltat
      241 dvsalfccnk afvfllswiv lkdrfmgvri vaaimaitgi vmmayadnfh adsiigvafa
      301 vgsastsaly kvlfkmflgs anfgeaahfv stlgffnlif isftpvilyf tkvehwssfa
      361 alpwgclcgm aglwlafnil vnvgvvltyp ilisigtvls vpgnaavdll kqevifnvvr
      421 laatiiicig fllmllpeew deitlrfins lkekkseehv dditdssvhl rsrsrangtv
      481 sipla
//
LOCUS       XP_061014352             294 aa            linear   MAM 02-DEC-2023
DEFINITION  factor associated with metabolism and energy isoform X1 [Dama
            dama].
ACCESSION   XP_061014352
VERSION     XP_061014352.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158369.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..294
                     /product="factor associated with metabolism and energy
                     isoform X1"
                     /calculated_mol_wt=34635
     Region          1..294
                     /region_name="DUF4619"
                     /note="Domain of unknown function (DUF4619); pfam15398"
                     /db_xref="CDD:464705"
     CDS             1..294
                     /gene="CCDC198"
                     /coded_by="XM_061158369.1:1..885"
                     /db_xref="GeneID:133067193"
ORIGIN      
        1 mglshskphp rvtkvvplqn keeetplagp vdfaftqnle enslysfarr qdqnkalegq
       61 lpplretwyg rysegpramy fdfpleqqet siikrhpprr lqklepidlp qvitserlln
      121 qqearrthka kqelekkmqt lmypfgkrqy lhkmqmlemn rkrqeaqvel kkslhkeart
      181 skqkqrdhka ekilqsvpgn ddgdfltllp detlnrslgn tqnaeflehq arndhchrki
      241 gkmetwlreq evrgellwds sssdsdesgk veekkralvr trteriqyfd effd
//
LOCUS       XP_061014353             293 aa            linear   MAM 02-DEC-2023
DEFINITION  factor associated with metabolism and energy isoform X2 [Dama
            dama].
ACCESSION   XP_061014353
VERSION     XP_061014353.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158370.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..293
                     /product="factor associated with metabolism and energy
                     isoform X2"
                     /calculated_mol_wt=34507
     Region          1..293
                     /region_name="DUF4619"
                     /note="Domain of unknown function (DUF4619); pfam15398"
                     /db_xref="CDD:464705"
     CDS             1..293
                     /gene="CCDC198"
                     /coded_by="XM_061158370.1:1..882"
                     /db_xref="GeneID:133067193"
ORIGIN      
        1 mglshskphp rvtkvvplqn keeetplagp vdfaftqnle enslysfarr qdqnkalegq
       61 lpplretwyg rysegpramy fdfpleqqet siikrhpprr lqklepidlp qvitserlln
      121 qqearrthka kelekkmqtl mypfgkrqyl hkmqmlemnr krqeaqvelk kslhkearts
      181 kqkqrdhkae kilqsvpgnd dgdfltllpd etlnrslgnt qnaeflehqa rndhchrkig
      241 kmetwlreqe vrgellwdss ssdsdesgkv eekkralvrt rteriqyfde ffd
//
LOCUS       XP_061014354             297 aa            linear   MAM 02-DEC-2023
DEFINITION  homeobox protein OTX2 isoform X1 [Dama dama].
ACCESSION   XP_061014354
VERSION     XP_061014354.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158371.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..297
                     /product="homeobox protein OTX2 isoform X1"
                     /calculated_mol_wt=32319
     Region          47..102
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          161..242
                     /region_name="TF_Otx"
                     /note="Otx1 transcription factor; pfam03529"
                     /db_xref="CDD:427350"
     CDS             1..297
                     /gene="OTX2"
                     /coded_by="XM_061158371.1:1..894"
                     /db_xref="GeneID:133067195"
ORIGIN      
        1 mmsylkqppy avnglsltts gmdllhpsvg ypgpwascpv atprkqrrer ttftraqldv
       61 lealfaktry pdifmreeva lkinlpesrv qvwfknrrak crqqqqqqqn ggqnkvrpak
      121 kktsparevs sesgtsgqft ppsstsvpai ssssapvsiw spasisplsd plstssscmq
      181 rsypmtytqa sgysqgyags tsyfggmdcg syltpmhhql pgpgttlspm gtnavtshln
      241 qspaslstqg ygasslgfns ttdcldykdq taswklnfna dcldykdqts swkfqvl
//
LOCUS       XP_061014355             289 aa            linear   MAM 02-DEC-2023
DEFINITION  homeobox protein OTX2 isoform X2 [Dama dama].
ACCESSION   XP_061014355
VERSION     XP_061014355.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158372.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..289
                     /product="homeobox protein OTX2 isoform X2"
                     /calculated_mol_wt=31521
     Region          39..94
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          153..234
                     /region_name="TF_Otx"
                     /note="Otx1 transcription factor; pfam03529"
                     /db_xref="CDD:427350"
     CDS             1..289
                     /gene="OTX2"
                     /coded_by="XM_061158372.1:1..870"
                     /db_xref="GeneID:133067195"
ORIGIN      
        1 mmsylkqppy avnglsltts gmdllhpsvg ypatprkqrr erttftraql dvlealfakt
       61 rypdifmree valkinlpes rvqvwfknrr akcrqqqqqq qnggqnkvrp akkktspare
      121 vssesgtsgq ftppsstsvp aissssapvs iwspasispl sdplstsssc mqrsypmtyt
      181 qasgysqgya gstsyfggmd cgsyltpmhh qlpgpgttls pmgtnavtsh lnqspaslst
      241 qgygasslgf nsttdcldyk dqtaswklnf nadcldykdq tsswkfqvl
//
LOCUS       XP_061014356             143 aa            linear   MAM 02-DEC-2023
DEFINITION  prefoldin subunit 1-like [Dama dama].
ACCESSION   XP_061014356
VERSION     XP_061014356.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158373.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..143
                     /product="prefoldin subunit 1-like"
                     /calculated_mol_wt=16561
     Region          15..113
                     /region_name="Prefoldin_1"
                     /note="prefoldin subunit 1; cd23164"
                     /db_xref="CDD:467480"
     Site            order(15..16,19,26,29,90,93..94,96..97,99..101,103..104,
                     107..108,110..111)
                     /site_type="other"
                     /note="prefoldin beta subunit /TRiC interface [polypeptide
                     binding]"
                     /db_xref="CDD:467480"
     Region          15..54
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:467480"
     Site            order(50..51,54,56..57,59..61,63,68)
                     /site_type="other"
                     /note="prefoldin oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467480"
     Region          74..113
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:467480"
     CDS             1..143
                     /gene="LOC133067197"
                     /coded_by="XM_061158373.1:8..439"
                     /db_xref="GeneID:133067197"
ORIGIN      
        1 mvapvdlelk kaftelqakv idtqqkvkla dvqieqlnrt kkhahltdte imtlvdetnm
       61 yegvgrmfil qskeaihnql lekqkiaeek ikeleqkksy lersvkeaed niremliwre
      121 ghsrqplrnl fflipaipge epv
//
LOCUS       XP_061014357             343 aa            linear   MAM 02-DEC-2023
DEFINITION  TATA box-binding protein-like 2 [Dama dama].
ACCESSION   XP_061014357
VERSION     XP_061014357.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158374.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..343
                     /product="TATA box-binding protein-like 2"
                     /calculated_mol_wt=37755
     Region          167..340
                     /region_name="TBP_eukaryotes"
                     /note="eukaryotic TATA box binding protein (TBP): Present
                     in archaea and eukaryotes, TBPs are transcription factors
                     that recognize promoters and initiate transcription. TBP
                     has been shown to be an essential component of three
                     different transcription initiation...; cd04516"
                     /db_xref="CDD:239952"
     Site            order(171..172,174,201..202,206,208,215,217,221,223,225,
                     227,257,262,264,293..294,299,310,312,314,318)
                     /site_type="other"
                     /note="DNA interaction surface [nucleotide binding]"
                     /db_xref="CDD:239952"
     Site            order(186,193..195,197,202,208,210)
                     /site_type="other"
                     /note="TFIIA interaction surface [polypeptide binding]"
                     /db_xref="CDD:239952"
     Site            order(201,298..299,304,335..336)
                     /site_type="other"
                     /note="NC2 interaction surface [polypeptide binding]"
                     /db_xref="CDD:239952"
     Site            order(274..275,287..291,294,299)
                     /site_type="other"
                     /note="TFIIB interaction surface [polypeptide binding]"
                     /db_xref="CDD:239952"
     CDS             1..343
                     /gene="TBPL2"
                     /coded_by="XM_061158374.1:1..1032"
                     /db_xref="GeneID:133067198"
ORIGIN      
        1 meeektylel yldqcsaqda ltpsrsplls pavpydvdml tssnpetafh pqleevtets
       61 gsfsavdlsf lldelsqekk dqtvirskhe ieencrtqsr qtrlplpsql dtglasdsss
      121 gssshshlhp adgnsaqpsp ekphslplap iapmtpvapl sersgiapql qnivstvnla
      181 ckldlkkial haknaeynpk rfaavimrir eprttalifs sgkmvctgak seeqsrlaar
      241 kyarvvqklg fparfldfti qnmvgscdvr fpisleglvl thqqfssyep elfpgliyrm
      301 vkprivllif vsgkvvltga kkrsdiceaf eniypilkgf kka
//
LOCUS       XP_061014359              81 aa            linear   MAM 02-DEC-2023
DEFINITION  cortexin-2 [Dama dama].
ACCESSION   XP_061014359
VERSION     XP_061014359.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158376.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..81
                     /product="cortexin-2"
                     /calculated_mol_wt=8863
     Region          10..81
                     /region_name="Cortexin"
                     /note="Cortexin of kidney; pfam11057"
                     /db_xref="CDD:314086"
     CDS             1..81
                     /gene="CTXN2"
                     /coded_by="XM_061158376.1:1..246"
                     /db_xref="GeneID:133067204"
ORIGIN      
        1 msstycgnts akmsvnevsa fsltleqktg fafvgilcif lglliircfk illdpyssmp
       61 sstwedevee fdkgtfeyal a
//
LOCUS       XP_061014360             503 aa            linear   MAM 02-DEC-2023
DEFINITION  aromatase-like [Dama dama].
ACCESSION   XP_061014360
VERSION     XP_061014360.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158377.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..503
                     /product="aromatase-like"
                     /calculated_mol_wt=57774
     Region          72..485
                     /region_name="CYP19A1"
                     /note="cytochrome P450 family 19, subfamily A, polypeptide
                     1; cd20616"
                     /db_xref="CDD:410709"
     Site            order(107,115,132..133,141,145,152,306,310..311,364,370,
                     373,375,429..431,435..439,446..447)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410709"
     Site            order(115,133..134,224,305..306,309..310,370,372..374,477)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410709"
     CDS             1..503
                     /gene="LOC133067208"
                     /coded_by="XM_061158377.1:1..1512"
                     /db_xref="GeneID:133067208"
ORIGIN      
        1 mflevlnprh ynvtsmvsev vpiasiaill ltgflllvwn yedtssipgp syflgigpli
       61 shcrflwmgi gsacnyynkm ygefmrvwvc geetliisks ssmfhvmkhs hyisrfgskl
      121 glqfigmhek giifnnnpal wkavrpfftk alsgpglvrt vticadsitk hldrleevrn
      181 dlgyvdvltl mrriildtsn mlflgiplde saivvktqgy fdawqalllk pdiffkiswl
      241 crkyeksvkd lkdameilie ekrhristae kledcidfat elifaekrge ltrenvnqci
      301 lemliaapdt tsvsvffmlc liakhpqvee aimreiqavv gerdiriddm qklkvvenfi
      361 nesmryqpvv nhvmrkaled dvidgypvkk gtniilnlgr mhrleffpkp neftlenfak
      421 nvpyryfqpf gfgpracagk yiamvmmkvi lvtllrrfhv qtlqglcvek mqkkndlslh
      481 pdktsnqlem ifiprnsdkc leh
//
LOCUS       XP_061014361             503 aa            linear   MAM 02-DEC-2023
DEFINITION  aromatase [Dama dama].
ACCESSION   XP_061014361
VERSION     XP_061014361.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158378.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..503
                     /product="aromatase"
                     /calculated_mol_wt=57958
     Region          72..485
                     /region_name="CYP19A1"
                     /note="cytochrome P450 family 19, subfamily A, polypeptide
                     1; cd20616"
                     /db_xref="CDD:410709"
     Site            order(107,115,132..133,141,145,152,306,310..311,364,370,
                     373,375,429..431,435..439,446..447)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410709"
     Site            order(115,133..134,224,305..306,309..310,370,372..374,477)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410709"
     CDS             1..503
                     /gene="LOC133067209"
                     /coded_by="XM_061158378.1:1..1512"
                     /db_xref="GeneID:133067209"
ORIGIN      
        1 mflevlnprh ynvtsmvsev vpiasiaill ltgflllvwn yedtssipgp syflgigpli
       61 shcrflwmgi gsacnyynkm ygefmrvwvc geetliisks ssmfhvmkhs hyisrfgskl
      121 glqfigmhek giifnnnpal wkavrpfftk alsgpglvrm vticadsitk hldrleevrn
      181 dlgyvdvltl mrrimldtsn mlflgiplde saivvkiqgy fdawqalllk pdiffkiswl
      241 crkyeksvkd lkdameilie ekrhristae kledcidfat elifaekrge ltrenvnqci
      301 lemliaapdt msvsvffmlf liakhpqvee aimreiqavv gerdiriddm qklkvvenfi
      361 nesmryqpvv dlvmrkaled dvidgypvkk gtniilnlgr mhrleffpkp neftlenfak
      421 nvpyryfqpf gfgpracagk yiamvmmkvi lvtllrrfhv qtlqgrcvek mqkkndlslh
      481 pdetsdrlem ifiprnsdkc leh
//
LOCUS       XP_061014362             547 aa            linear   MAM 02-DEC-2023
DEFINITION  gliomedin [Dama dama].
ACCESSION   XP_061014362
VERSION     XP_061014362.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158379.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..547
                     /product="gliomedin"
                     /calculated_mol_wt=58317
     Region          157..214
                     /region_name="Collagen"
                     /note="Collagen triple helix repeat (20 copies);
                     pfam01391"
                     /db_xref="CDD:460189"
     Region          300..540
                     /region_name="OLF"
                     /note="Olfactomedin-like domain; pfam02191"
                     /db_xref="CDD:460482"
     CDS             1..547
                     /gene="GLDN"
                     /coded_by="XM_061158379.1:1..1644"
                     /db_xref="GeneID:133067210"
ORIGIN      
        1 maggaergrg gagwglrgal aavallsaln aagtvfalcq wrglsaalra leaqrgreqr
       61 edsalrafla elsraprrgp apppdpasaa rnkrshggep aqhiraeshd mlmmmtysmv
      121 pirvmvdlcn strgicltgp pgpagppgvg glpghngsdg qpgpqgpkge kgangkrgkm
      181 gppgatgtpg ekgdpgelgl pgnegpagqk gdkgdkgdvs ndvlpagakg dqgppgppgp
      241 pgppgppgpp gsrrkgprqp nmfngqcpge tcavpnddtl vgktdekvse hhspeaesmi
      301 tsignpiqvl kvketfgtwi resanksder iwvtehfsgi rvkefedqps lrngsytlih
      361 lpyyfhgcgh tvhnnslyyh kggsntivrf efgketsqtl klenalyfdr kylfanskty
      421 fnlavdekgl wiiyassadg ssilvaqlee rtfsvvqhin ttypkskagn afiargilyv
      481 tdtkdtritf afdllggkqi nanfalrtsq svlamlsynm rdqhlyswed ghlmlypvqf
      541 lsaalhq
//
LOCUS       XP_061014364              77 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA polymerase-associated protein LEO1-like [Dama dama].
ACCESSION   XP_061014364
VERSION     XP_061014364.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158381.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..77
                     /product="RNA polymerase-associated protein LEO1-like"
                     /calculated_mol_wt=8489
     CDS             1..77
                     /gene="LOC133067211"
                     /coded_by="XM_061158381.1:225..458"
                     /db_xref="GeneID:133067211"
ORIGIN      
        1 mdlfgdiddi ssdsdgdnqp piqrqpvtda cgvpqnqree episetkiev eipninsdlg
       61 nelyfvklpk flsiesk
//
LOCUS       XP_061014365             184 aa            linear   MAM 02-DEC-2023
DEFINITION  bcl-2-like protein 10 [Dama dama].
ACCESSION   XP_061014365
VERSION     XP_061014365.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158382.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..184
                     /product="bcl-2-like protein 10"
                     /calculated_mol_wt=21439
     Region          6..150
                     /region_name="Bcl-2_like"
                     /note="Apoptosis regulator proteins of the Bcl-2 family,
                     named after B-cell lymphoma 2. This alignment model spans
                     what have been described as Bcl-2 homology regions BH1,
                     BH2, BH3, and BH4. Many members of this family have an
                     additional C-terminal transmembrane...; cd06845"
                     /db_xref="CDD:132900"
     Site            6..20
                     /site_type="active"
                     /note="BH4 [active]"
                     /db_xref="CDD:132900"
     Site            39..47
                     /site_type="active"
                     /note="BH3 [active]"
                     /db_xref="CDD:132900"
     Site            order(42..43,45..46,50,66..67,70..71,74..75,83,85..86,
                     88..89,93,97,150)
                     /site_type="active"
                     /note="BH3-homology region binding site [active]"
                     /db_xref="CDD:132900"
     Site            order(74..76,82..94)
                     /site_type="active"
                     /note="BH1 [active]"
                     /db_xref="CDD:132900"
     Site            136..150
                     /site_type="active"
                     /note="BH2 [active]"
                     /db_xref="CDD:132900"
     CDS             1..184
                     /gene="BCL2L10"
                     /coded_by="XM_061158382.1:56..610"
                     /db_xref="GeneID:133067212"
ORIGIN      
        1 mvdpfrerta rlltdylefc arepgtpapa pstpeaavlr hvavriqean rnvlllyrrf
       61 rrhrvelvar maqrlldedp gpswgrvasl vtfagsller ppqttrrqkr dddgvsrdcr
      121 llvallcaqf cerhrawmma nggwdgfclf fshslqpswe rqlvwfflsy wtviiiiyfw
      181 mkls
//
LOCUS       XP_061014366             465 aa            linear   MAM 02-DEC-2023
DEFINITION  hepatocyte nuclear factor 6 [Dama dama].
ACCESSION   XP_061014366
VERSION     XP_061014366.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158383.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..465
                     /product="hepatocyte nuclear factor 6"
                     /calculated_mol_wt=50833
     Region          288..362
                     /region_name="CUT"
                     /note="CUT domain; pfam02376"
                     /db_xref="CDD:460543"
     Region          385..440
                     /region_name="HOX"
                     /note="Homeodomain; smart00389"
                     /db_xref="CDD:197696"
     Site            order(386..390,392,409,415,428,430..431,434..435,437..439)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     Site            order(388,391,431,434..435,438)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     CDS             1..465
                     /gene="ONECUT1"
                     /coded_by="XM_061158383.1:1..1398"
                     /db_xref="GeneID:133067213"
ORIGIN      
        1 mnaqltmeai gelhgvshep vpapadllgg spharssvah rgshlppahp rsmgmaslld
       61 ggsgsgdyhh hhrapehsla gplhptmtma cetppgmsmp ttyttltplq plppistvsd
      121 kfphhhhhhh hhhhphhhqr lagnvsgsft lmrderglas mnnlytpyhk dvagmgqsls
      181 plsgsglggi hnsqqglphy ahpgaamptd kmltpngfea hhpamlgrhg eqhltptsag
      241 mvpinglpph hphahlnaqg hgqllgtare pnpsvtgaqv sngsnsgqme eintkevaqr
      301 ittelkrysi pqaifaqrvl crsqgtlsdl lrnpkpwskl ksgretfrrm wkwlqepefq
      361 rmsalrlaac krkeqehgkd rgntpkkprl vftdvqrrtl haifkenkrp skelqitisq
      421 qlglelstvs nffmnarrrs ldkwqdeggs nsgnssssss tctka
//
LOCUS       XP_061014367            2215 aa            linear   MAM 02-DEC-2023
DEFINITION  protein unc-13 homolog C isoform X1 [Dama dama].
ACCESSION   XP_061014367
VERSION     XP_061014367.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158384.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2215
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2215
                     /product="protein unc-13 homolog C isoform X1"
                     /calculated_mol_wt=250467
     Region          <348..781
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     Region          1080..1161
                     /region_name="C1_Munc13-2-like"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in Munc13-2, Munc13-3 and similar proteins; cd20859"
                     /db_xref="CDD:410409"
     Site            order(1104..1110,1118..1122,1125)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410409"
     Region          1221..1347
                     /region_name="C2B_Munc13"
                     /note="C2 domain second repeat in Munc13 (mammalian
                     uncoordinated) proteins; cd04027"
                     /db_xref="CDD:175993"
     Site            order(1237,1243,1289,1291,1308)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175993"
     Region          1541..2029
                     /region_name="MUN"
                     /note="MUN domain; pfam06292"
                     /db_xref="CDD:461870"
     Region          2063..2182
                     /region_name="C2C_Munc13"
                     /note="C2 domain third repeat in Munc13 (mammalian
                     uncoordinated) proteins; cd08395"
                     /db_xref="CDD:176041"
     CDS             1..2215
                     /gene="UNC13C"
                     /coded_by="XM_061158384.1:1..6648"
                     /db_xref="GeneID:133067215"
ORIGIN      
        1 mvanlfksli lpyihklckg mftkklgntt kkkenrqpkk dqdlpvagqt ktpkfsntlk
       61 stvkklakcs strnlsteee eankefslsp tfsyrvaian glqknihvtn gdheellqel
      121 ssiessyses lselrssten qaqstrmmpv rrnrkssssl apsegssdge rtlhslklga
      181 lrklrkwkks qecvssdsel stmkktwgir sksldrtarn pktnalepgf sssgcisqtq
      241 dvmemifkel qgisqietel selrghvnal khsideisss vevvqneieq lrtgfvqsrr
      301 etrdihdyik hlghvgskas lrflnvpeer feyiesvvyq ilidkmgfsd apnaikiefa
      361 qrighqrdcp nakprpilvy fetpqqrdsv lkksyklkgt gigistdilt hdikerkerg
      421 ipssqtyesm diklstpepr lkknswhspd dsdgelgsdl nrnsyavlsk sefptkgsas
      481 kssskshnar aknktasssk iankseydki sshlpesdnl akqttthyad vtplwhshsd
      541 fftakfscse sdfsklcqsy sedfsenqff trtngsslls ssdrelwqrk qegtptiyds
      601 pqdqglngas qgvqvqseie ntetvdsgvs ngmvcasgdq shysdsqlsl hedlspwkew
      661 nqeeqgadlg ldsstqevfd ydanslsdqq ldvyhkdled fgkghsdlqd dsesydltqd
      721 dnsspcpgld nepqgqwvgq ynsyqepnsn elyqnqnqls mmyrsqselq sddsedappk
      781 swhsrlsidl sdkafsfpkf gstlqraksa levvwnkstq slsgyedsgs slmgrfrtls
      841 qstanesstt ldsdvytepy yykaedeedy sepvadnetd yvevmeqvla klenrtsvte
      901 tdeqmqdydh psyetpyetp qdegydgqad dvvgegglep lneavaeiem kedenqnipe
      961 qpvevtkpkr irpsfkeaal kaykkqmael eekilagdss svdekarivs gndvdaskfs
     1021 alqafggagr glygidsmpd lrrkktlpiv rdvtlaarks glslamvirp slnneelkih
     1081 vfkktlqali ypmssttphn fevwtattpt ycyecegllw giarqgmkcs ecgvkchekc
     1141 qdllnadclq raaeksskhg aedktqtiit amkermkire tnrpevfevi qemfqisked
     1201 fvqytkaakq svldgtskws akititvvsa qglqakdktg ssdpyvtvqv gknkrrtkti
     1261 fgnlnpvwde kfyfechnst drikvrvwde dddiksrvkq hfkkesddfl gqtivevrtl
     1321 sgemdvwynl ekrtdksavs gairlkinve ikgeekvapy hiqytclhen lfhyltevka
     1381 nggvkipevk gdeawkvffd dasqeivdef amrygiesiy qamthfscls skymcpgvpa
     1441 vmstllanin afyahttlst nvqvsasdrf aatnfgrekf iklldqlhns lridlskyre
     1501 hfpasnaerl qdlkstvdll tsitffrmkv lelqsppkas mvvkdcvrac ldstykyifd
     1561 nchelysqli dpskkqdvpr edqgpttknl dfwpqlitlm vtiidedkta ytpvlnqfpq
     1621 elnmgkisae imwtlfaqdm kyaleehekq rlckstdymn lhfkvkwfyn eyvrelpafk
     1681 davpeyslwf epfvmqwlde nedvsmeflh galgrdkkdg fqqtsdhalf scsvvdvfaq
     1741 lnqsfeiikk lecpnpeals hlmrrfakti nkvllqyaai issdfssycd kenvpcilmn
     1801 niqqlrvqle kmfesmggke ldpeastvlk elqvklsgvl delsvtyges fqliiegcik
     1861 qmsfelnqmr angnttsnkn saamdaeivl rplmdfldkt lslsakicek tvlkrvlkel
     1921 wklvlnkiek qivlppltdq tgpqmifiaa kdlgqlsklk ehmiredakg ltprqcgime
     1981 vvlatikqyf haggnglkkn flekspdlks lryalslytq ttdalikkfi dtqtsqsrps
     2041 kdsvgqisvh vditttpgtg ehkvtvkvia indlnwqtta mfrpfvevcm lgpslgdkkr
     2101 kqgtktksnt wspkynetfq ftlskenrpg ayelhlsvkd ycfaredrii gmtviqlqni
     2161 aekgshgawy pllknvsmde tgltilrils qrtsddvake fvrlksetry aeesa
//
LOCUS       XP_061014368            2217 aa            linear   MAM 02-DEC-2023
DEFINITION  protein unc-13 homolog C isoform X2 [Dama dama].
ACCESSION   XP_061014368
VERSION     XP_061014368.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158385.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2217
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2217
                     /product="protein unc-13 homolog C isoform X2"
                     /calculated_mol_wt=250669
     Region          <348..781
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     Region          1082..1163
                     /region_name="C1_Munc13-2-like"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in Munc13-2, Munc13-3 and similar proteins; cd20859"
                     /db_xref="CDD:410409"
     Site            order(1106..1112,1120..1124,1127)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410409"
     Region          1223..1349
                     /region_name="C2B_Munc13"
                     /note="C2 domain second repeat in Munc13 (mammalian
                     uncoordinated) proteins; cd04027"
                     /db_xref="CDD:175993"
     Site            order(1239,1245,1291,1293,1310)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175993"
     Region          1543..2031
                     /region_name="MUN"
                     /note="MUN domain; pfam06292"
                     /db_xref="CDD:461870"
     Region          2065..2184
                     /region_name="C2C_Munc13"
                     /note="C2 domain third repeat in Munc13 (mammalian
                     uncoordinated) proteins; cd08395"
                     /db_xref="CDD:176041"
     CDS             1..2217
                     /gene="UNC13C"
                     /coded_by="XM_061158385.1:4..6657"
                     /db_xref="GeneID:133067215"
ORIGIN      
        1 mvanlfksli lpyihklckg mftkklgntt kkkenrqpkk dqdlpvagqt ktpkfsntlk
       61 stvkklakcs strnlsteee eankefslsp tfsyrvaian glqknihvtn gdheellqel
      121 ssiessyses lselrssten qaqstrmmpv rrnrkssssl apsegssdge rtlhslklga
      181 lrklrkwkks qecvssdsel stmkktwgir sksldrtarn pktnalepgf sssgcisqtq
      241 dvmemifkel qgisqietel selrghvnal khsideisss vevvqneieq lrtgfvqsrr
      301 etrdihdyik hlghvgskas lrflnvpeer feyiesvvyq ilidkmgfsd apnaikiefa
      361 qrighqrdcp nakprpilvy fetpqqrdsv lkksyklkgt gigistdilt hdikerkerg
      421 ipssqtyesm diklstpepr lkknswhspd dsdgelgsdl nrnsyavlsk sefptkgsas
      481 kssskshnar aknktasssk iankseydki sshlpesdnl akqttthyad vtplwhshsd
      541 fftakfscse sdfsklcqsy sedfsenqff trtngsslls ssdrelwqrk qegtptiyds
      601 pqdqglngas qgvqvqseie ntetvdsgvs ngmvcasgdq shysdsqlsl hedlspwkew
      661 nqeeqgadlg ldsstqevfd ydanslsdqq ldvyhkdled fgkghsdlqd dsesydltqd
      721 dnsspcpgld nepqgqwvgq ynsyqepnsn elyqnqnqls mmyrsqselq sddsedappk
      781 swhsrlsidl sdkafsfpkf gstlqraksa levvwnkstq slsgyedsgs slmgrfrtls
      841 qstanesstt ldsdvytepy yykaedeedy sepvadnetd yvevmeqvla klenrtsvte
      901 tdeqmqdydh psyetpyetp qdegydgqad dvvgegglep lneavaeiem kedenqnipe
      961 qpvevtkpkr irpsfkeaal kaykkqmael eekilagdss svdekarivs gndvdaskfs
     1021 alqafggagr glygidsmpd lrrkktlpiv rdvamtlaar ksglslamvi rpslnneelk
     1081 ihvfkktlqa liypmssttp hnfevwtatt ptycyecegl lwgiarqgmk csecgvkche
     1141 kcqdllnadc lqraaekssk hgaedktqti itamkermki retnrpevfe viqemfqisk
     1201 edfvqytkaa kqsvldgtsk wsakititvv saqglqakdk tgssdpyvtv qvgknkrrtk
     1261 tifgnlnpvw dekfyfechn stdrikvrvw dedddiksrv kqhfkkesdd flgqtivevr
     1321 tlsgemdvwy nlekrtdksa vsgairlkin veikgeekva pyhiqytclh enlfhyltev
     1381 kanggvkipe vkgdeawkvf fddasqeivd efamrygies iyqamthfsc lsskymcpgv
     1441 pavmstllan inafyahttl stnvqvsasd rfaatnfgre kfiklldqlh nslridlsky
     1501 rehfpasnae rlqdlkstvd lltsitffrm kvlelqsppk asmvvkdcvr acldstykyi
     1561 fdnchelysq lidpskkqdv predqgpttk nldfwpqlit lmvtiidedk taytpvlnqf
     1621 pqelnmgkis aeimwtlfaq dmkyaleehe kqrlckstdy mnlhfkvkwf yneyvrelpa
     1681 fkdavpeysl wfepfvmqwl denedvsmef lhgalgrdkk dgfqqtsdha lfscsvvdvf
     1741 aqlnqsfeii kklecpnpea lshlmrrfak tinkvllqya aiissdfssy cdkenvpcil
     1801 mnniqqlrvq lekmfesmgg keldpeastv lkelqvklsg vldelsvtyg esfqliiegc
     1861 ikqmsfelnq mrangnttsn knsaamdaei vlrplmdfld ktlslsakic ektvlkrvlk
     1921 elwklvlnki ekqivlpplt dqtgpqmifi aakdlgqlsk lkehmireda kgltprqcgi
     1981 mevvlatikq yfhaggnglk knflekspdl kslryalsly tqttdalikk fidtqtsqsr
     2041 pskdsvgqis vhvditttpg tgehkvtvkv iaindlnwqt tamfrpfvev cmlgpslgdk
     2101 krkqgtktks ntwspkynet fqftlskenr pgayelhlsv kdycfaredr iigmtviqlq
     2161 niaekgshga wypllknvsm detgltilri lsqrtsddva kefvrlkset ryaeesa
//
LOCUS       XP_061014369             126 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein eL31-like [Dama dama].
ACCESSION   XP_061014369
VERSION     XP_061014369.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158386.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..126
                     /product="large ribosomal subunit protein eL31-like"
                     /calculated_mol_wt=14563
     Region          19..100
                     /region_name="Ribosomal_L31e"
                     /note="Ribosomal protein L31e; pfam01198"
                     /db_xref="CDD:460108"
     CDS             1..126
                     /gene="LOC133067216"
                     /coded_by="XM_061158386.1:5..385"
                     /db_xref="GeneID:133067216"
ORIGIN      
        1 mapakkggkk kkgrsainev vtreytinih krihgvgfkk rapralkeir kfamkemgtp
       61 dvridtrlnk avwtkgirnv pyrirvrlsr khnededspn klynlvtyvp vttfknlqsm
      121 wtrtnc
//
LOCUS       XP_061014370             277 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 117-like [Dama dama].
ACCESSION   XP_061014370
VERSION     XP_061014370.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158387.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..277
                     /product="coiled-coil domain-containing protein 117-like"
                     /calculated_mol_wt=29904
     Region          139..277
                     /region_name="CCDC117"
                     /note="Coiled-coil domain-containing protein 117;
                     pfam15810"
                     /db_xref="CDD:434955"
     CDS             1..277
                     /gene="LOC133067219"
                     /coded_by="XM_061158387.1:1..834"
                     /db_xref="GeneID:133067219"
ORIGIN      
        1 maalgrpfsg lplsggsdfl qpppafagra fppgtegael vprpglratp sssggsaarg
       61 risahsrkkh kreeeeedcp vrkkrlteag lcagpndwil calqdteghg vnpctgglsa
      121 pglldvicee mdqttgepqc evarrrlqei edriidedee veadrninrl pslvlsdtmk
      181 tglkrefdei ftkkmiesms rpsmglvlwk plpgllsdkp kpssdaknyp gesptkhaaa
      241 gtafpqrtel fleprptglp vhnsletaac teeemel
//
LOCUS       XP_061014371             165 aa            linear   MAM 02-DEC-2023
DEFINITION  small ribosomal subunit protein eS10-like [Dama dama].
ACCESSION   XP_061014371
VERSION     XP_061014371.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158388.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..165
                     /product="small ribosomal subunit protein eS10-like"
                     /calculated_mol_wt=18701
     Region          3..95
                     /region_name="S10_plectin"
                     /note="Plectin/S10 domain; pfam03501"
                     /db_xref="CDD:427337"
     CDS             1..165
                     /gene="LOC133067221"
                     /coded_by="XM_061158388.1:17..514"
                     /db_xref="GeneID:133067221"
ORIGIN      
        1 mlmpeknria iyellfkegv mvakkdvhmp khpeladnnv pnlhvmkavq slksrgyvke
       61 qfawrhfywy ltnegiqylr dylhlppeiv patlrhsrpe tgrprpkgle gerparltrg
      121 eadrdtyrrs avppgankka eagagsatef qfrggfgrgr gqppq
//
LOCUS       XP_061014373             156 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin-ribosomal protein eS31 fusion protein-like [Dama dama].
ACCESSION   XP_061014373
VERSION     XP_061014373.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158390.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..156
                     /product="ubiquitin-ribosomal protein eS31 fusion
                     protein-like"
                     /calculated_mol_wt=17889
     Region          1..76
                     /region_name="Ubl_ubiquitin"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin;
                     cd01803"
                     /db_xref="CDD:340501"
     Site            order(6..9,11,34..37,40,42,44,46..49,68..76)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:340501"
     Site            order(8..12,31..35,40,42,44,46..49,68,70..76)
                     /site_type="other"
                     /note="E1 interaction site [polypeptide binding]"
                     /db_xref="CDD:340501"
     Region          103..147
                     /region_name="Ribosomal_S27"
                     /note="Ribosomal protein S27a; pfam01599"
                     /db_xref="CDD:460261"
     CDS             1..156
                     /gene="LOC133067222"
                     /coded_by="XM_061158390.1:22..492"
                     /db_xref="GeneID:133067222"
ORIGIN      
        1 mqifvktlrg ktitleveps dtienvkaki qdkegippdq qrlifagkql edgrtlsdyn
       61 iqkestlhlv lrlrggakkr kkksyttpkk nkhkrkkvkl avlkyykvde ngkisrlrre
      121 cpsdecgagv fmashfdrhy cgkccltycf nkpedk
//
LOCUS       XP_061014374             377 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM81A isoform X1 [Dama dama].
ACCESSION   XP_061014374
VERSION     XP_061014374.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158391.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..377
                     /product="protein FAM81A isoform X1"
                     /calculated_mol_wt=43137
     Region          <88..>263
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
     CDS             1..377
                     /gene="FAM81A"
                     /coded_by="XM_061158391.1:79..1212"
                     /db_xref="GeneID:133067226"
ORIGIN      
        1 maqrstvfps lvteerrvrt mprhsqsltm apyssvslve qledrilche kttaalveha
       61 frikddivss lqkmqnkggg drlarlflee hirnitaivk qlnrdievlq eqirardnis
      121 ygtnsalktl emrqlsglgd lrgrvarcda siarlsaehk ttyeglqhln keqqaaklil
      181 etkikdaegq isqllnrvdl siseqstklk mshrdsnhql qlldtkfkgt veelsnqils
      241 arnwlqqeqe riekellqki dqlslvvken sgaserdmek klsqmsarld kieesqkknm
      301 evqrtkqeee kvhgriskle lqmtedlkem kaevdagfta iyesigslrq vleakmkldk
      361 dqlqkqiqqm qkpeapm
//
LOCUS       XP_061014375             377 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM81A isoform X1 [Dama dama].
ACCESSION   XP_061014375
VERSION     XP_061014375.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158392.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..377
                     /product="protein FAM81A isoform X1"
                     /calculated_mol_wt=43137
     Region          <88..>263
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
     CDS             1..377
                     /gene="FAM81A"
                     /coded_by="XM_061158392.1:137..1270"
                     /db_xref="GeneID:133067226"
ORIGIN      
        1 maqrstvfps lvteerrvrt mprhsqsltm apyssvslve qledrilche kttaalveha
       61 frikddivss lqkmqnkggg drlarlflee hirnitaivk qlnrdievlq eqirardnis
      121 ygtnsalktl emrqlsglgd lrgrvarcda siarlsaehk ttyeglqhln keqqaaklil
      181 etkikdaegq isqllnrvdl siseqstklk mshrdsnhql qlldtkfkgt veelsnqils
      241 arnwlqqeqe riekellqki dqlslvvken sgaserdmek klsqmsarld kieesqkknm
      301 evqrtkqeee kvhgriskle lqmtedlkem kaevdagfta iyesigslrq vleakmkldk
      361 dqlqkqiqqm qkpeapm
//
LOCUS       XP_061014376             368 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM81A isoform X2 [Dama dama].
ACCESSION   XP_061014376
VERSION     XP_061014376.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158393.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..368
                     /product="protein FAM81A isoform X2"
                     /calculated_mol_wt=42216
     Region          <79..>254
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
     CDS             1..368
                     /gene="FAM81A"
                     /coded_by="XM_061158393.1:95..1201"
                     /db_xref="GeneID:133067226"
ORIGIN      
        1 menmhlrrvr tmprhsqslt mapyssvslv eqledrilch ekttaalveh afrikddivs
       61 slqkmqnkgg gdrlarlfle ehirnitaiv kqlnrdievl qeqirardni sygtnsalkt
      121 lemrqlsglg dlrgrvarcd asiarlsaeh kttyeglqhl nkeqqaakli letkikdaeg
      181 qisqllnrvd lsiseqstkl kmshrdsnhq lqlldtkfkg tveelsnqil sarnwlqqeq
      241 eriekellqk idqlslvvke nsgaserdme kklsqmsarl dkieesqkkn mevqrtkqee
      301 ekvhgriskl elqmtedlke mkaevdagft aiyesigslr qvleakmkld kdqlqkqiqq
      361 mqkpeapm
//
LOCUS       XP_061014377             325 aa            linear   MAM 02-DEC-2023
DEFINITION  forkhead box protein B1 [Dama dama].
ACCESSION   XP_061014377
VERSION     XP_061014377.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158394.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..325
                     /product="forkhead box protein B1"
                     /calculated_mol_wt=34877
     Region          1..110
                     /region_name="FH_FOXB2"
                     /note="Forkhead (FH) domain found in Forkhead box protein
                     B2 (FOXB2) and similar proteins; cd20043"
                     /db_xref="CDD:410817"
     Site            order(18,36..37,40,59..60,62..63,66,73,83..85,87)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410817"
     CDS             1..325
                     /gene="FOXB1"
                     /coded_by="XM_061158394.1:1..978"
                     /db_xref="GeneID:133067228"
ORIGIN      
        1 mprpgrntys dqkppysyis ltamaiqssp ekmlplseiy kfimdrfpyy rentqrwqns
       61 lrhnlsfndc fikiprrpdq pgkgsfwalh pscgdmfeng sflrrrkrfk vlksdhlaps
      121 kpadaaqylq qqaklrlsal aasgthlpqm ptaaynlggv aqpsgfkhpf aieniiarey
      181 kmpgglafsa mqpvpaaypl pnqlttmgss lgtgwphvyg sagmidsatp ismasgdysa
      241 ygvplkplch aagqtlpaip vpikptpaav palpalpapi ptllsnspps lsptssqtat
      301 sqsspatpse tltspasalh svavh
//
LOCUS       XP_061014378             379 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: C2 calcium-dependent domain-containing protein
            4A [Dama dama].
ACCESSION   XP_061014378
VERSION     XP_061014378.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158395.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..379
                     /product="LOW QUALITY PROTEIN: C2 calcium-dependent
                     domain-containing protein 4A"
                     /calculated_mol_wt=40770
     CDS             1..379
                     /gene="C2CD4A"
                     /coded_by="XM_061158395.1:880..2019"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:133067232"
ORIGIN      
        1 mlprmtsssg assgtgtccl mwclerlrlg perllrgrnr lyqdaarrtt altparcanv
       61 ltpdripefc ipprlvpcpt ltairdswge qagtddgagr tdwdprsqaa lslphlprar
      121 taygfcalle sphtrrresl flggpxrrra htygggggdy pltprarapt aprearsgsl
      181 ldalgpgprc rrflhaseel lrrvlrtqrn rdlaracsvs stdgddeden egppgsgspe
      241 rapgsspspt pnsrperlea egtvtlgrag galrlaaeys rasgrlrvrl vraegpagga
      301 aeprapvgcr vsfvlkprga vvrrsrravl eqdlcldgls edevrrlavr vkaenrgrgl
      361 ergrllgqge lllgpllll
//
LOCUS       XP_061014380             364 aa            linear   MAM 02-DEC-2023
DEFINITION  C2 calcium-dependent domain-containing protein 4A [Dama dama].
ACCESSION   XP_061014380
VERSION     XP_061014380.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158397.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..364
                     /product="C2 calcium-dependent domain-containing protein
                     4A"
                     /calculated_mol_wt=38560
     CDS             1..364
                     /gene="LOC133067234"
                     /coded_by="XM_061158397.1:185..1279"
                     /db_xref="GeneID:133067234"
ORIGIN      
        1 mgllgklras aagsaplepa fsnvltpnri peffipprlp tpyapessps aaalprrcaa
       61 epdlwlrgad dgagrtdwdp rsqaalslph lprartaygf callesphtr rkeslflgdp
      121 gaaalppapr prahtygggg gdapmapgar apiatpkahg gpspsldtfa ppprcrrllr
      181 apegllrral ragrsrgltr arsvssgdge dddederras sesptrapvt slsphrdprp
      241 erleaegtvt lgraggalrl aaeynrasgr lrvrlvraeg paggaaepra pvgcrvsfvl
      301 kprgavvrrs rravleqdlc ldglsedevr rlavrvkaen rgrglergrl lgqgelllgp
      361 llll
//
LOCUS       XP_061014381             125 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein eL31-like [Dama dama].
ACCESSION   XP_061014381
VERSION     XP_061014381.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158398.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..125
                     /product="large ribosomal subunit protein eL31-like"
                     /calculated_mol_wt=14321
     Region          19..100
                     /region_name="Ribosomal_L31e"
                     /note="Ribosomal protein L31e; pfam01198"
                     /db_xref="CDD:460108"
     CDS             1..125
                     /gene="LOC133067237"
                     /coded_by="XM_061158398.1:21..398"
                     /db_xref="GeneID:133067237"
ORIGIN      
        1 mapskkggek kkgrsainev vtreytinih krihgvgfkk rapralkeir kfamkemgtp
       61 dmridtrlnk avwakgirnv pyrirvrlsr krnedegspn klytlvtyvp vttfknlqtv
      121 nvdkn
//
LOCUS       XP_061014382              81 aa            linear   MAM 02-DEC-2023
DEFINITION  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3-like
            [Dama dama].
ACCESSION   XP_061014382
VERSION     XP_061014382.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158399.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..81
                     /product="NADH dehydrogenase [ubiquinone] 1 alpha
                     subcomplex subunit 3-like"
                     /calculated_mol_wt=8755
     Region          7..81
                     /region_name="NADHdh_A3"
                     /note="NADH dehydrogenase 1 alpha subcomplex subunit 3;
                     pfam14987"
                     /db_xref="CDD:464423"
     CDS             1..81
                     /gene="LOC133067238"
                     /coded_by="XM_061158399.1:1683..1928"
                     /db_xref="GeneID:133067238"
ORIGIN      
        1 maervaaflk nvwakelvlv asfaivglav ilptlspytk yplminratp cnypvplqdd
       61 gnmpdvpshp qdpqgpslkr l
//
LOCUS       XP_061014383              92 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein eL43-like [Dama dama].
ACCESSION   XP_061014383
VERSION     XP_061014383.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158400.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..92
                     /product="large ribosomal subunit protein eL43-like"
                     /calculated_mol_wt=10162
     Region          1..90
                     /region_name="PTZ00255"
                     /note="60S ribosomal protein L37a; Provisional"
                     /db_xref="CDD:240332"
     CDS             1..92
                     /gene="LOC133067239"
                     /coded_by="XM_061158400.1:23..301"
                     /db_xref="GeneID:133067239"
ORIGIN      
        1 makrtkkvgi vgkygtryga slrkmvkkie isqhakytcs fcgktkmkrr avgiwhcgsc
       61 mktvaggawt ynttsavtvk sairrmkelk dq
//
LOCUS       XP_061014384              79 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 258 [Dama dama].
ACCESSION   XP_061014384
VERSION     XP_061014384.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158401.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..79
                     /product="transmembrane protein 258"
                     /calculated_mol_wt=8962
     Region          7..79
                     /region_name="Ost5"
                     /note="Oligosaccharyltransferase subunit 5; pfam05251"
                     /db_xref="CDD:461602"
     CDS             1..79
                     /gene="LOC133067242"
                     /coded_by="XM_061158401.1:50..289"
                     /db_xref="GeneID:133067242"
ORIGIN      
        1 meleamsryt spvnpavfph ltvvllaigm fftawffvye vtstkytrdi ykellislva
       61 slfmgfgvlf lllwvgiyi
//
LOCUS       XP_061014386              86 aa            linear   MAM 02-DEC-2023
DEFINITION  cytochrome c oxidase subunit 6B1-like [Dama dama].
ACCESSION   XP_061014386
VERSION     XP_061014386.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158403.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..86
                     /product="cytochrome c oxidase subunit 6B1-like"
                     /calculated_mol_wt=9926
     Region          8..85
                     /region_name="Cyt_c_Oxidase_VIb"
                     /note="Cytochrome c oxidase subunit VIb. Cytochrome c
                     oxidase (CcO), the terminal oxidase in the respiratory
                     chains of eukaryotes and most bacteria, is a multi-chain
                     transmembrane protein located in the inner membrane of
                     mitochondria and the cell membrane of...; cd00926"
                     /db_xref="CDD:238466"
     Site            order(12..15,24..27,59,62..68)
                     /site_type="other"
                     /note="Subunit VIb/II interface [polypeptide binding]"
                     /db_xref="CDD:238466"
     Site            24
                     /site_type="other"
                     /note="Subunit VIb/I interface [polypeptide binding]"
                     /db_xref="CDD:238466"
     Site            order(28,31,83)
                     /site_type="other"
                     /note="Subunit VIb/III interface [polypeptide binding]"
                     /db_xref="CDD:238466"
     Site            order(47,49..54)
                     /site_type="other"
                     /note="Subunit VIb/VIb interface [polypeptide binding]"
                     /db_xref="CDD:238466"
     Site            order(76,79..81)
                     /site_type="other"
                     /note="Subunit VIb/VIa interface [polypeptide binding]"
                     /db_xref="CDD:238466"
     CDS             1..86
                     /gene="LOC133067245"
                     /coded_by="XM_061158403.1:72..332"
                     /db_xref="GeneID:133067245"
ORIGIN      
        1 maediktkik nyqtapfdsr fpnqnqtrnc wqnyldfhgc ekamtakggd vsvcewyrrv
       61 ykslcpiswv sawddrraeg tfpgki
//
LOCUS       XP_061014387            1025 aa            linear   MAM 02-DEC-2023
DEFINITION  MAM domain-containing glycosylphosphatidylinositol anchor protein 2
            [Dama dama].
ACCESSION   XP_061014387
VERSION     XP_061014387.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158404.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1025
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1025
                     /product="MAM domain-containing
                     glycosylphosphatidylinositol anchor protein 2"
                     /calculated_mol_wt=115049
     Region          117..197
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          127..131
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          140..144
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          162..166
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          176..181
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          203..288
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          320..397
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          329..333
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          343..347
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          362..366
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          376..381
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          418..493
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          424..428
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          439..443
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          469..473
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          483..488
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          497..500
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          510..587
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          817..988
                     /region_name="MAM"
                     /note="Meprin, A5 protein, and protein tyrosine
                     phosphatase Mu (MAM) domain. MAM is an extracellular
                     domain which mediates protein-protein interactions and is
                     found in a diverse set of proteins, many of which are
                     known to function in cell adhesion. Members...; cd06263"
                     /db_xref="CDD:99706"
     CDS             1..1025
                     /gene="MDGA2"
                     /coded_by="XM_061158404.1:1..3078"
                     /db_xref="GeneID:133067246"
ORIGIN      
        1 msvgcagllr salgrrwert darrfslpra ipvhlvsaee raerarlaag lqkvpllppr
       61 agyvhvhvkm dlvyglvwll tvllegisgq gvyapptvri vhsglacnie eeryservyt
      121 iregetlelt clvtghprpq irwtktagsa sdrfqdssvf netlritniq rhqggryyck
      181 aenglgspai ksirvdvyyl ddpvvtvhqs igeakeqfyy ertvflrcva nsnppvrysw
      241 rrgqevllqg sdkgveiyep fftqgetkil klknlrpqdy anysciasvr nvcnipdkmv
      301 sfrlsnktas psikllvddp ivvnpgeait lvcvttggep vpsltwvrsf gtlpektvln
      361 ggtltipait sedagtysci annnvgnpak kstniivral kkgrfwitpd pyhkddniqi
      421 grevkiscqv eavpseeltf swfkngrplr ssermvitqt dpdvspgttn ldiidlkftd
      481 fgtytcvasl kgggisdisi dvnissstvp pnltvpqeks plvtregdti elqcqvtgkp
      541 kpiilwsrad kevampdgnm qmesydgtlr ivnvsremsg myrcqtsqyn gfnvkpreal
      601 vqlivqyppa vepafleirq gqdrsvtmsc rvlraypirv ltyewrlgnk llrtgqfdsq
      661 eyteypvksl snenygvync siineagagr csflvtgkay apefyydtyn pvwqnrhrvy
      721 syslqwtqmn pdavdrivay rlgirqagqq rwweqeikin gniqkgelit ynltelikpe
      781 ayevrltplt kfgegdstir vikysapvnp hlrefhcgfe dgniclftqd dtdnfdwtkq
      841 statrntkyt pntgpnadrs gskegfymyi etsrprlege karllspvfs iapknpygpt
      901 ntaycfsffy hmygqhigvl nvylrlkgqt tienplwsss gnkgqrwnea hvniypitsf
      961 qlifegirgp giegdiaidd vsiaegecak qdlttknsvd gavgilihiw lfpvivlisi
     1021 lsprr
//
LOCUS       XP_061014388             214 aa            linear   MAM 02-DEC-2023
DEFINITION  ribosomal protein uL16-like isoform X1 [Dama dama].
ACCESSION   XP_061014388
VERSION     XP_061014388.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158405.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..214
                     /product="ribosomal protein uL16-like isoform X1"
                     /calculated_mol_wt=24455
     Region          1..209
                     /region_name="PTZ00173"
                     /note="60S ribosomal protein L10; Provisional"
                     /db_xref="CDD:185498"
     Site            order(41,43..44,47,63..64,67,70,74,77,88..90,92,94,98..99,
                     115..119,133,153..154,157..158)
                     /site_type="other"
                     /note="23S rRNA interface [nucleotide binding]"
                     /db_xref="CDD:238714"
     Site            56..57
                     /site_type="other"
                     /note="5S rRNA interface [nucleotide binding]"
                     /db_xref="CDD:238714"
     Site            order(68..70,73..74)
                     /site_type="other"
                     /note="putative antibiotic binding site [chemical
                     binding]"
                     /db_xref="CDD:238714"
     Site            order(77,85..86,88,139)
                     /site_type="other"
                     /note="L25 interface [polypeptide binding]"
                     /db_xref="CDD:238714"
     Site            order(113..114,117..118)
                     /site_type="other"
                     /note="L27 interface [polypeptide binding]"
                     /db_xref="CDD:238714"
     CDS             1..214
                     /gene="RPL10L"
                     /coded_by="XM_061158405.1:1..645"
                     /db_xref="GeneID:133067247"
ORIGIN      
        1 mgrrparcyr ycknkpypks rfcrgvpdak irifdlgrkk akvdefplcg hmvsdeyeql
       61 ssealeaari cankymvksc gkdgfhirvr lhpfhvirin kmlscagadr lqtgmrgafg
      121 kpqgtvarvh igqvimsirt klqnkehvie alrrakfkfp grqkihiskk wgftkfnade
      181 fedkvakkrl ipdgcgvkyv pnrgpldkwr alhs
//
LOCUS       XP_061014389             187 aa            linear   MAM 02-DEC-2023
DEFINITION  ribosomal protein uL16-like isoform X2 [Dama dama].
ACCESSION   XP_061014389
VERSION     XP_061014389.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158406.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..187
                     /product="ribosomal protein uL16-like isoform X2"
                     /calculated_mol_wt=21389
     Region          1..182
                     /region_name="Ribosomal_L16_L10e"
                     /note="L16 is an essential protein in the large ribosomal
                     subunit of bacteria, mitochondria, and chloroplasts. Large
                     subunits that lack L16 are defective in peptidyl
                     transferase activity, peptidyl-tRNA hydrolysis activity,
                     association with the 30S subunit; cl00353"
                     /db_xref="CDD:469737"
     Site            order(36..37,40,43,47,50,61..63,65,67,71..72,88..92,106,
                     126..127,130..131)
                     /site_type="other"
                     /note="23S rRNA interface [nucleotide binding]"
                     /db_xref="CDD:238714"
     Site            order(41..43,46..47)
                     /site_type="other"
                     /note="putative antibiotic binding site [chemical
                     binding]"
                     /db_xref="CDD:238714"
     Site            order(50,58..59,61,112)
                     /site_type="other"
                     /note="L25 interface [polypeptide binding]"
                     /db_xref="CDD:238714"
     Site            order(86..87,90..91)
                     /site_type="other"
                     /note="L27 interface [polypeptide binding]"
                     /db_xref="CDD:238714"
     CDS             1..187
                     /gene="RPL10L"
                     /coded_by="XM_061158406.1:1..564"
                     /db_xref="GeneID:133067247"
ORIGIN      
        1 mgrrparcyr ycknkpypks rfcrgvpdak irifdlalea aricankymv kscgkdgfhi
       61 rvrlhpfhvi rinkmlscag adrlqtgmrg afgkpqgtva rvhigqvims irtklqnkeh
      121 viealrrakf kfpgrqkihi skkwgftkfn adefedkvak krlipdgcgv kyvpnrgpld
      181 kwralhs
//
LOCUS       XP_061014390             685 aa            linear   MAM 02-DEC-2023
DEFINITION  protein 4.2 [Dama dama].
ACCESSION   XP_061014390
VERSION     XP_061014390.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158407.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..685
                     /product="protein 4.2"
                     /calculated_mol_wt=76737
     Region          8..124
                     /region_name="Transglut_N"
                     /note="Transglutaminase family; pfam00868"
                     /db_xref="CDD:459971"
     Region          260..351
                     /region_name="TGc"
                     /note="Transglutaminase/protease-like homologues;
                     smart00460"
                     /db_xref="CDD:214673"
     Region          474..563
                     /region_name="Transglut_C"
                     /note="Transglutaminase family, C-terminal ig like domain;
                     pfam00927"
                     /db_xref="CDD:460002"
     Region          582..680
                     /region_name="Transglut_C"
                     /note="Transglutaminase family, C-terminal ig like domain;
                     pfam00927"
                     /db_xref="CDD:460002"
     CDS             1..685
                     /gene="EPB42"
                     /coded_by="XM_061158407.1:1..2058"
                     /db_xref="GeneID:133067248"
ORIGIN      
        1 mgqglgiksc dfqaarnnae hhtndissqr livrrgqpft islhfqapvl tflralkkva
       61 liaqtgkqps eangtqatfs vsslgdrkww sarveerddq swtisvttpt daiighysll
      121 lqvsgrkqcl gqftllfnpw nredavflgn eaqrreylln qngliflgta dciqdepwdf
      181 gqleedvidl glslltvdnq vekwgnpvyv arvlgallhv lkkksvlpta kiqtteeral
      241 lnkrrgsvpi lrqwvtghgr pvyegqawvl aavactvlrg lgiparvvtt ftsaqgtggg
      301 llvgeyynee glqngegnrg rawifqtste cwmarpalpe gydgwqvlyp salkggevle
      361 acdlvpvrav kegivwltpa vsdifasina scvvwkcred rtleltdsnt kyfgnnistk
      421 nvdcdrredi tqnykypegs sqekmvlekv qkyrmkhkkd ddiyppccet ddllyllmka
      481 pssivlgenv efsvnllnps dqekevqlai glqavyyngi laaklwrkkf vftlsagsdk
      541 kipfnysfeq slpensflrl tamathsslt cfaqqdiaic rphlviempe taeqhqplmv
      601 vvsihnpldv pledcvisif grgliyreks yrvnsvqpkn tlrtqvefmp mkvgcqrltv
      661 emdcnmfqnl tnfrtvmvva reppa
//
LOCUS       XP_061014391             814 aa            linear   MAM 02-DEC-2023
DEFINITION  cytosolic phospholipase A2 delta [Dama dama].
ACCESSION   XP_061014391
VERSION     XP_061014391.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158408.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..814
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..814
                     /product="cytosolic phospholipase A2 delta"
                     /calculated_mol_wt=91153
     Region          23..142
                     /region_name="C2_cPLA2"
                     /note="C2 domain present in cytosolic PhosphoLipase A2
                     (cPLA2); cd04036"
                     /db_xref="CDD:176001"
     Site            order(41,44,66,94,96)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176001"
     Region          164..263
                     /region_name="cPLA2_C2"
                     /note="Cytosolic phospholipases A2 C2-domain; pfam18695"
                     /db_xref="CDD:465834"
     Region          264..803
                     /region_name="Patatin_and_cPLA2"
                     /note="Patatins and Phospholipases; cl11396"
                     /db_xref="CDD:416256"
     Site            order(325..326,328,356,643)
                     /site_type="active"
                     /db_xref="CDD:132836"
     Site            354..358
                     /site_type="other"
                     /note="nucleophile elbow"
                     /db_xref="CDD:132836"
     CDS             1..814
                     /gene="PLA2G4D"
                     /coded_by="XM_061158408.1:135..2579"
                     /db_xref="GeneID:133067250"
ORIGIN      
        1 merltprgpp ghphqreast cwrltvrvle arglgwadll seadpyvvlq lptapgtkfk
       61 tktvtnsshp vwnetftfli qsqvknilel tlydedtvtq ddawfkvlyd vsdllpgrll
      121 wktfslraqg peeldvefli ekmsdrlenl itnnvlvare lsrldvhvis kavaadqdel
      181 elvlkgsyed tqtsalgtas afcfhymaaq eaelsgclks skssgwdsgn saghltvplr
      241 slamgkevti dvpatnapgv klqlkaescp eelavhlgfd lcaeerafls rrkqvvakal
      301 kqalqldrdl qedevpvvgi matgggaram tslyghllal qklglldcvt yfsgisgstw
      361 tmahlygdpe wsqkdlegpi shvrehlaks kleafspecl asyhrelaqr aeqghtttfv
      421 dlwglvlefm lhgrvvdqkl sgqraalerg qnplplflsl svkqndlqtl dfkewvefsp
      481 yevgflkyga fippelfgse ffmgrlmkrl pesricfleg iwsnifslnl ldawydfsss
      541 gdtwrqhird kirdldsevp passgtsswp etlwmqpgta laqmfkgflt srplyqhssn
      601 flrglqmhkd ycaqkafttw adcqsdsspn qltpqepqlc lvdagyfint scpamfrpgr
      661 rldliisfdy slsspfevlq qteldfrarg lpfprvepsp kdrrqprech lfsdpacpda
      721 pvvlhfplvn asfkdhsapg vqrgpadlsa gqidltgvss pysmfnmtyk eedfdrlvql
      781 cdynvrssqd tilqalrtvl knrapearpp rvqt
//
LOCUS       XP_061014392             122 aa            linear   MAM 02-DEC-2023
DEFINITION  prefoldin subunit 1-like [Dama dama].
ACCESSION   XP_061014392
VERSION     XP_061014392.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158409.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..122
                     /product="prefoldin subunit 1-like"
                     /calculated_mol_wt=14100
     Region          15..112
                     /region_name="Prefoldin_1"
                     /note="prefoldin subunit 1; cd23164"
                     /db_xref="CDD:467480"
     Site            order(15..16,19,26,29,90,93..94,96..97,99..101,103..104,
                     107..108,110..111)
                     /site_type="other"
                     /note="prefoldin beta subunit /TRiC interface [polypeptide
                     binding]"
                     /db_xref="CDD:467480"
     Region          15..54
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:467480"
     Site            order(50..51,54,56..57,59..61,63,68)
                     /site_type="other"
                     /note="prefoldin oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467480"
     Region          74..112
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:467480"
     CDS             1..122
                     /gene="LOC133067252"
                     /coded_by="XM_061158409.1:376..744"
                     /db_xref="GeneID:133067252"
ORIGIN      
        1 mvapmdlelk kaftelqakv idtqqkvkla dvqieqlnrt kkhahltdte irtlvdetnm
       61 yegvgrmfil qskeaihnql lekqkiaeek ikeleqkksy lersvkeaes nihetlmarr
      121 aq
//
LOCUS       XP_061014394            1402 aa            linear   MAM 02-DEC-2023
DEFINITION  protein dispatched homolog 2 [Dama dama].
ACCESSION   XP_061014394
VERSION     XP_061014394.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158411.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1402
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1402
                     /product="protein dispatched homolog 2"
                     /calculated_mol_wt=151662
     Region          <468..>811
                     /region_name="MMPL"
                     /note="Predicted exporter protein, RND superfamily
                     [General function prediction only]; COG1033"
                     /db_xref="CDD:440656"
     Region          <573..656
                     /region_name="Sterol-sensing"
                     /note="Sterol-sensing domain of SREBP cleavage-activation;
                     pfam12349"
                     /db_xref="CDD:463544"
     CDS             1..1402
                     /gene="DISP2"
                     /coded_by="XM_061158411.1:1..4209"
                     /db_xref="GeneID:133067255"
ORIGIN      
        1 mdggggsnss dpvpgpgpeg eqrpegella pegsspdrsq skavapeasp erscslhscp
       61 vedpssssgp ppatstlqpv gpssplapah ftyprapqey rggsslpglg draglcshgs
      121 slspspapsq rdgawkpasv qhhvvsvrqe rafrmpksys qliaecpvav lllclafill
      181 ctlagllggq lpdfskpllg feprdtdigr klvvwralqa ltgpkkllsl spdlelnssn
      241 phttlspatp wssaqeevvr prrmvesled rgqesffcgp peksyaqlvf mstsagslwn
      301 lhaihsmcrm ehdqirshps fgalcqrtaa neccpswslg nyvavlsnrs sclditqadt
      361 trtlallrac alyyhrgalv psclgpgkdk pprctqvptk csqssavyql lhflldrdfl
      421 spqtadyqvp slkysllflp tlkgasmmgi yldrlampwg lsdnytsvtg mdlglkqell
      481 rhylaqdtvy pllalaaifl sialylrslf ltlmvllgvl gsllvaffly rvafrmayfp
      541 fvnlaalvll ssvcanhtli ffdlwrlsks qlpsgglaer vgrtmhhfgy lllvsglttg
      601 aafyasylsr lpavrcfaly mgtavlahla ltlawlpssa vlherylarg casqacgpwa
      661 gsaprrlala lhrrlrglrr aasstsrllf qrllpcgvik fryiwicwfa alaaggayia
      721 gvsprlrlpt lppprgqvfr pshpferfda eyrqqflfer lpqgegghmp vvlvwgilpv
      781 dtgdpldprs nsslvrdpaf sasgpeaqrw llalcrgarn qsffgaqpeg wptlcfveal
      841 qrwmespgca rlgpglccgh sgfpwapqlf lhclkmmale qgpesprdlg arfntqgsla
      901 alvlqfqtnf pyspdysqah hfytevnhwl aaelgrappg lrrgwftsrl elyslqhsls
      961 tepavvlgla lalafatlll gtwnvplslf svaavagtvl ltvgllvlle wqlntaealf
     1021 lsasvglsvd ftvnycisyh lcphpdrlsr vafslrqssc atavgaaalf aagvlmlpat
     1081 vllyrklgiv lmmvkcvscg fasfffqslc cffgpekncg qilwpcahlp wdagtgepgg
     1141 ekagrprpgp vggvpgscse qyelqplarr rspsfdtsta tsklshrpsv lsedlqlhdg
     1201 pycsrpppgp asprelfldh qavfsqcpal qtsspykqag pspktqarqg spgkkaelvq
     1261 asleapahpp rpkpqvvepp dclcssastl eglsvsdetc lstsepsarv pdsvgasped
     1321 ldeteqtvpe rgqlnekrdt lwlalketvy dpslpashqs ssswkgrggp gdgspvvlpn
     1381 sqpdlpdvwv rrpsthtsgy ss
//
LOCUS       XP_061014395             203 aa            linear   MAM 02-DEC-2023
DEFINITION  hemoglobin fetal subunit beta-like [Dama dama].
ACCESSION   XP_061014395
VERSION     XP_061014395.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158412.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..203
                     /product="hemoglobin fetal subunit beta-like"
                     /calculated_mol_wt=22105
     Region          64..202
                     /region_name="Hb-beta-like"
                     /note="Hemoglobin beta, gamma, delta, epsilon, and related
                     Hb subunits; cd08925"
                     /db_xref="CDD:381262"
     Site            order(87,90..91,94,97,154,156,159,165,168..169,172..173,
                     176,179..181,184..185,188)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:381262"
     Site            order(88,98..99,120,123..124,127,145,149,153,155,159..160,
                     163,198)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:381262"
     CDS             1..203
                     /gene="LOC133067256"
                     /coded_by="XM_061158412.1:70..681"
                     /db_xref="GeneID:133067256"
ORIGIN      
        1 mvdttsgilc phalnpeadd kndkekrlsc grkigllknt phllltqlcs lattqtdtml
       61 taeekssvta lfgkvkvdev ggealgrllv vypwtqrffe hfgdlstada vlsnaqvkah
      121 gkkvlesfsd glkhlddlkg afaklselhc dklhvdpenf rllgnvlvvv larrfggeft
      181 pdlqasfqkv vtgvanalah ryh
//
LOCUS       XP_061014396             314 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane and coiled-coil domain-containing protein 5A [Dama
            dama].
ACCESSION   XP_061014396
VERSION     XP_061014396.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158413.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..314
                     /product="transmembrane and coiled-coil domain-containing
                     protein 5A"
                     /calculated_mol_wt=36978
     Region          28..313
                     /region_name="TMCO5"
                     /note="TMCO5 family; pfam14992"
                     /db_xref="CDD:464427"
     CDS             1..314
                     /gene="TMCO5A"
                     /coded_by="XM_061158413.1:1..945"
                     /db_xref="GeneID:133067257"
ORIGIN      
        1 meeqkedqld yesekveilr laqskknins lnmdlerdmq rideanqdll vkihekedei
       61 qrleneitqt rdlaedeewe kensttmeme ralqeveeet arlerknetl vhniaelerk
      121 ltrksqkatk ceqdnvkgtp eeskvklqql eascadqeke lakviedyaf vaqlcedqal
      181 cikkyqetlk kiqeeletrf lerevskvmc mnstskeyns qnnkasplqq aarvfsnlrl
      241 tvprlslsri fqyfffttlf firllgyllf hvsfinpdlf vnilpkilsr nilwklkcfl
      301 fpsltleted vlph
//
LOCUS       XP_061014397             128 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphatidylinositol N-acetylglucosaminyltransferase subunit P-like
            [Dama dama].
ACCESSION   XP_061014397
VERSION     XP_061014397.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158414.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..128
                     /product="phosphatidylinositol
                     N-acetylglucosaminyltransferase subunit P-like"
                     /calculated_mol_wt=14712
     Region          11..124
                     /region_name="PIG-P"
                     /note="pfam08510"
                     /db_xref="CDD:462498"
     CDS             1..128
                     /gene="LOC133067258"
                     /coded_by="XM_061158414.1:1..387"
                     /db_xref="GeneID:133067258"
ORIGIN      
        1 mvenslsplp eraiygfvlf lssqfgfily lvwafipesw lyslgltywp qkywavvlpg
       61 yllitivigy vllfvinmms tspldsihni tdnyaknqqr kkdqeeaipa lrdipisevn
      121 qmffleak
//
LOCUS       XP_061014398             377 aa            linear   MAM 02-DEC-2023
DEFINITION  actin, alpha cardiac muscle 1 [Dama dama].
ACCESSION   XP_061014398
VERSION     XP_061014398.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158415.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..377
                     /product="actin, alpha cardiac muscle 1"
                     /calculated_mol_wt=41888
     Region          8..372
                     /region_name="ASKHA_NBD_actin"
                     /note="nucleotide-binding domain (NBD) of actin and
                     similar proteins; cd10224"
                     /db_xref="CDD:466823"
     CDS             1..377
                     /gene="ACTC1"
                     /coded_by="XM_061158415.1:71..1204"
                     /db_xref="GeneID:133067259"
ORIGIN      
        1 mcddeettal vcdngsglvk agfagddapr avfpsivgrp rhqgvmvgmg qkdsyvgdea
       61 qskrgiltlk ypiehgiitn wddmekiwhh tfynelrvap eehptlltea plnpkanrek
      121 mtqimfetfn vpamyvaiqa vlslyasgrt tgivldsgdg vthnvpiyeg yalphaimrl
      181 dlagrdltdy lmkiltergy sfvttaerei vrdikeklcy valdfenema taasssslek
      241 syelpdgqvi tignerfrcp etlfqpsfig mesagihett ynsimkcdid irkdlyannv
      301 lsggttmypg iadrmqkeit alapstmkik iiapperkys vwiggsilas lstfqqmwis
      361 kqeydeagps ivhrkcf
//
LOCUS       XP_061014399             321 aa            linear   MAM 02-DEC-2023
DEFINITION  gap junction delta-2 protein [Dama dama].
ACCESSION   XP_061014399
VERSION     XP_061014399.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158416.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..321
                     /product="gap junction delta-2 protein"
                     /calculated_mol_wt=35979
     Region          3..277
                     /region_name="Connexin"
                     /note="pfam00029"
                     /db_xref="CDD:459638"
     CDS             1..321
                     /gene="GJD2"
                     /coded_by="XM_061158416.1:1..966"
                     /db_xref="GeneID:133067260"
ORIGIN      
        1 mgewtilerl leaavqqhst migrilltvv vifrilivai vgetvyddeq tmfvcntlqp
       61 gcnqacydra fpishirywv fqiimvctps lcfitysvhq sakqrerrys tvflaldrdp
      121 pesmggpggt ggggsgggkr edkklqnaiv ngvlqntent sketepdcle vkeltphpsg
      181 lrtaarsklr rqegisrfyi iqvvfrnale igflvgqyfl ygfsvpglye cdrypcikev
      241 ecyvsrptek tvflvfmfav sgicvvlnla elnhlgwrki klavrgaqak rksvyeirnk
      301 dlprvsvpnf grtqssdsay v
//
LOCUS       XP_061014400             349 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: transmembrane and coiled-coil
            domain-containing protein 5B-like [Dama dama].
ACCESSION   XP_061014400
VERSION     XP_061014400.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158417.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 2 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..349
                     /product="LOW QUALITY PROTEIN: transmembrane and
                     coiled-coil domain-containing protein 5B-like"
                     /calculated_mol_wt=40850
     Region          28..348
                     /region_name="TMCO5"
                     /note="TMCO5 family; pfam14992"
                     /db_xref="CDD:464427"
     CDS             1..349
                     /gene="LOC133067264"
                     /coded_by="XM_061158417.1:1..1050"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 2 bases at 2
                     genomic stop codons"
                     /db_xref="GeneID:133067264"
ORIGIN      
        1 meeagqdpld dvqevmeipk levtkqnlds lnsdlekdlq rmdeanqvll kkiqekeeti
       61 qslerdimls vrqarereel nhlisekeea lrnleletak leknkeilsr svvevqkeis
      121 kkfknvgldk ealkqmlael kvklqkstes casqeeelvk iesdyqsvyq lcedqahyik
      181 kyqeilrqme kekemlllek evxrwrssiq saktrlgadc gsdhxlliak frlklkkktt
      241 rpfrckaqnn saqvvkrgst lvetiqsnme ktiikkqkri fwyrhfryfi fmviiffrll
      301 gyvlfylqyi npdllvdalp vvmsrdtlkr lrdvllpflt leveevlph
//
LOCUS       XP_061014401            1137 aa            linear   MAM 02-DEC-2023
DEFINITION  NUT family member 1 [Dama dama].
ACCESSION   XP_061014401
VERSION     XP_061014401.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158418.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1137
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1137
                     /product="NUT family member 1"
                     /calculated_mol_wt=119367
     Region          14..>535
                     /region_name="NUT"
                     /note="NUT protein; pfam12881"
                     /db_xref="CDD:432850"
     Region          <911..1125
                     /region_name="NUT"
                     /note="NUT protein; pfam12881"
                     /db_xref="CDD:432850"
     CDS             1..1137
                     /gene="NUTM1"
                     /coded_by="XM_061158418.1:29..3442"
                     /db_xref="GeneID:133067266"
ORIGIN      
        1 mssdgasplp gsdmtvnpgt alspftalpf pqpapgppdp ppweppsqap mpsafspgsp
       61 lvlsafpspl lvtgdggpgp sgagagkviv kvkteagsae psqtqnfilt qtalswiasa
      121 apcggpespa agiltasnvk tllpteavgl nqegvpclpa qapppaaqla pivspekawp
      181 gpqgttgegg ptatrpkpsl gdlscaskgv yenfrrwqry kalarrhlsq spdaealscf
      241 lipvlrslar lkptmtleea lpravqewer tsnfdrmify emaekfmefe aeeemqiqnn
      301 tqlmsgpqsl ppaaplkldp sgppapevcq qpayipkkaa skaraprrrq rksqrppape
      361 apkeippeav keyadimegl vgshlapees dgrqeeqeeq qeegiypdag llsyidelcs
      421 qevfvskvea vihpqfladv lspeqqrdpl alieeleqee glslaqlvqk rllaleeeed
      481 aeappscsaa qsdsspsisd ededgggrlr pspgprgagg slclgkaasl geqarevsgg
      541 qeqalhglrv mggdgntlps psgwglqlel aapqgtqgpp sierrgsgev tnqisppqdd
      601 llggagspgr flgtdrtset lplrwqegpe lelvpcldvg laglaplqgq glekqtlglq
      661 prqevegigv apqsmepsvl sqkgsseatw gddsglptvq sydqnpspra agnrdeagas
      721 lsprlwlsse mdaaglelpl qieevvenlh egecvtepqg dgqalgsrsr islgpreala
      781 pgdvgssavp cgdtdatval eernycglse pqtanspasr prndmaqspg tlqdpgdlwp
      841 edcppllesr igastlgvsk etrlpasqgs ilfletqdts sfpeaspeag ssrnsispll
      901 ettyvnlldi rdacglqlgv sedicplsfn sydpqgegre ntdlsepkdl apspgdqess
      961 ghgnpksipp hqglrstsps wgtrdalvar easpvieacs sadgakaeee egeedkelsn
     1021 fayllaskls lspkglplss lpasgllasg hpqgtqrash slapkatglg qppaaksgkr
     1081 alvggpvpve krplqgdepg apgekpvalg victsqprkr krdgfsksrr kkrrrsq
//
LOCUS       XP_061014402             312 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4F3/4F16/4F29-like [Dama dama].
ACCESSION   XP_061014402
VERSION     XP_061014402.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158419.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..312
                     /product="olfactory receptor 4F3/4F16/4F29-like"
                     /calculated_mol_wt=35080
     Region          25..291
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320354"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..312
                     /gene="LOC133067267"
                     /coded_by="XM_061158419.1:1..939"
                     /db_xref="GeneID:133067267"
ORIGIN      
        1 mgggnhsvvs eivlvgltss lemqlvlfli fsvfyvtsil gnllivltvt sdshlhspmy
       61 fllanlsfid vwvssitapk misdlfkerk visfqgcitq mffihviggt emvlliamaf
      121 dryvaicrpl hyliimnfkt cisllvaawt igvihsliqi lfvvnlpfcg pnkmdsfycd
      181 lprfirlact diyrlelvvt ansgfislgt ffilitsyif ilvtvwqrss gdlskalstl
      241 sahiavvvlf fgpcifvysw pfptvpvdkf laifdvvitp flnpaiynlr nkemkvamrr
      301 ifsqmlsfrk lf
//
LOCUS       XP_061014403             312 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4F3/4F16/4F29-like [Dama dama].
ACCESSION   XP_061014403
VERSION     XP_061014403.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158420.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..312
                     /product="olfactory receptor 4F3/4F16/4F29-like"
                     /calculated_mol_wt=34725
     Region          32..291
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..312
                     /gene="LOC133067268"
                     /coded_by="XM_061158420.1:1..939"
                     /db_xref="GeneID:133067268"
ORIGIN      
        1 mgganhslvs efvflglsss weiqlllflf fsvfymaslm gnllivfsvs adtslhspmy
       61 fllanlsfid vgvcsiaapk miydlfrkrk aisfggcltq iffihaiggt emvlliamaf
      121 dryvaickpl hyltimnprm ctlmlaaawv lglihsvaqm afvvdlpfcg pnvldsfycd
      181 lpqliklact etyrlefmvt ansglisvgs ffiliisyif ilvtvwkhss gsvskalstl
      241 sahvtvvvlf fgpliffytw pfpsshldkf laifdavltp flnpviytfr nkemkaamkk
      301 lchqlvsysk ms
//
LOCUS       XP_061014404             309 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4F3/4F16/4F29-like [Dama dama].
ACCESSION   XP_061014404
VERSION     XP_061014404.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158421.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..309
                     /product="olfactory receptor 4F3/4F16/4F29-like"
                     /calculated_mol_wt=35149
     Region          22..288
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          23..49
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320354"
     Region          56..82
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(78,81..82,94..99,101..102,105,150,152..156,192,
                     195..197,199..201,203..204,248,251..252,254..255,258,
                     262..263,265..267,270,273..274)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          94..124
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          137..158
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          192..222
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          228..258
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          263..288
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..309
                     /gene="LOC133067269"
                     /coded_by="XM_061158421.1:1..930"
                     /db_xref="GeneID:133067269"
ORIGIN      
        1 mnhsvvsefv flgltnswei qlllfvfssv fyvasmlgns lilltvmmnp hlhspmyfll
       61 anlsfidlgv ssvispkmiy dlfrnrkvis fggcvtqiff lhiiggvemv llitmafdry
      121 vaickplhyf timsrkkcil lvvaawiigl ihsivqlvfv aklpfcgpni idsfycdfpr
      181 fiklactdty rlefmvtans gfislgsffi livsyifili svrkhssgss skalstlsth
      241 vmvvilffgp cifvyiwphp rshldkflav fdavltpffn siiytfrnke mkmamrklcs
      301 hliiyrris
//
LOCUS       XP_061014405             312 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4F3/4F16/4F29-like [Dama dama].
ACCESSION   XP_061014405
VERSION     XP_061014405.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158422.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..312
                     /product="olfactory receptor 4F3/4F16/4F29-like"
                     /calculated_mol_wt=34791
     Region          25..291
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320354"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..312
                     /gene="LOC133067270"
                     /coded_by="XM_061158422.1:1..939"
                     /db_xref="GeneID:133067270"
ORIGIN      
        1 mdgannsvvs eflflgltns weiqlllfvf sstfyvasmm gnsliiltvt cdphlhspmy
       61 fllanlsfid mgvssvtspk mtydlfrkhk vvsfggciaq iffihviggv emvlliamaf
      121 dryvaickpl hyltimsprv cvffivaawm iglihsivql afvvklpfcg pnvldtfycd
      181 lprfiklaci dtyqlesmit ansgfisvgs ffiliisyii iiltvqkqss agsskalstl
      241 sahitvvvlf fgplifvytw pspsvpldkf laifdavltp llnpviytfr nqemkvamrr
      301 vcrqlvsyrk is
//
LOCUS       XP_061014406             312 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4F3/4F16/4F29-like [Dama dama].
ACCESSION   XP_061014406
VERSION     XP_061014406.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158423.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..312
                     /product="olfactory receptor 4F3/4F16/4F29-like"
                     /calculated_mol_wt=34876
     Region          25..291
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320354"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..312
                     /gene="LOC133067271"
                     /coded_by="XM_061158423.1:1..939"
                     /db_xref="GeneID:133067271"
ORIGIN      
        1 mdgannsvvs eflflgltns weiqlllfvf sstffmasmm gnsliiltvt cdphlhspmy
       61 fllanlsfid mgvssvtspk miydlfrkrk visfsgcitq iffihviggv evvlliamaf
      121 dryvaickpl hyltimsprl cisflvaawm iglihstvql vfvvnlpfcg pnmldsfycd
      181 lprliklacv dinqlesmvt ansgfisigs ffiliisyii iiltvqkhss tgsskalstl
      241 sahitvvvlf fgplifvytw pspsihldkf laifdavltp flnpviytlr nqemkvamrr
      301 vcrqlvsyrk is
//
LOCUS       XP_061014407             312 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4F15 [Dama dama].
ACCESSION   XP_061014407
VERSION     XP_061014407.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158424.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..312
                     /product="olfactory receptor 4F15"
                     /calculated_mol_wt=35472
     Region          35..291
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..312
                     /gene="LOC133067272"
                     /coded_by="XM_061158424.1:1..939"
                     /db_xref="GeneID:133067272"
ORIGIN      
        1 mdvmnqsivs efiflgfits weiqlllfvf aflfysasmm gnlvvvftia ldshlhspmy
       61 fllanlsvid mvfcsiivpk micdifkkhk sislcgcitq iffshaaggt emvllitmaf
      121 dryvaickpl hyltimsprm clhflvtswt iglihslvql afvvdlpfcg pnvldsfycd
      181 lprllrlvct ntqelefmvt vnsglisvgs fvllvisyif ilftvwkhts rglskalstl
      241 sahitvvvlf fgplmffytw psptshldky laifdafitp flnpviytfr nkemnmamrr
      301 lcsrlvhyrn is
//
LOCUS       XP_061014408             312 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4F3/4F16/4F29-like [Dama dama].
ACCESSION   XP_061014408
VERSION     XP_061014408.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158425.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..312
                     /product="olfactory receptor 4F3/4F16/4F29-like"
                     /calculated_mol_wt=34798
     Region          35..291
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..312
                     /gene="LOC133067273"
                     /coded_by="XM_061158425.1:1..939"
                     /db_xref="GeneID:133067273"
ORIGIN      
        1 mdggnhsvvs efvflglths wgiqllllvf ssvlyaasmt gnilivfsvt tdphlhspmy
       61 fllanlsfid lgacsisspk miydlfrkrk vissggciaq iffihviggv emvlliamaf
      121 dryvaickpl hyltimsprm cilflaaawa lgvshslfql afivnlpfcg pnvldsfycd
      181 lprllklact dtyrlqfmvt gnsgficvss ffillvsyif illtvwkrss gglskalstl
      241 sahitvvilf fgptmfvytw phpnsqmdkf lalsdavltp flnpviytfr nkemktamkr
      301 afrplmifrk is
//
LOCUS       XP_061014409             312 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4F3/4F16/4F29-like [Dama dama].
ACCESSION   XP_061014409
VERSION     XP_061014409.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158426.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..312
                     /product="olfactory receptor 4F3/4F16/4F29-like"
                     /calculated_mol_wt=34773
     Region          35..291
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..312
                     /gene="LOC133067275"
                     /coded_by="XM_061158426.1:1..939"
                     /db_xref="GeneID:133067275"
ORIGIN      
        1 mdggnhsvvs efvflglths wgiqllllvf fsvlyaasmt gnilivfsvt tdphlhspmy
       61 fllanlsfid lgacsvtspk micdlfrkrk vissggciaq iffihviggv emvlliamaf
      121 dkyvaickpl hylsimsprm cilflaaawa lgvshslfql afivnlpfcg pnvldsfycd
      181 lpqllrlact dtyrlqfmvt vnsgficvss ffillisyif illtvwkcss gglskalstl
      241 sahitvvilf fgptmfvytw phpnsqmdkf lalsdavltp flnpviytfr nkemklamkr
      301 afrpfvifrk is
//
LOCUS       XP_061014410             312 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4F3/4F16/4F29 [Dama dama].
ACCESSION   XP_061014410
VERSION     XP_061014410.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158427.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..312
                     /product="olfactory receptor 4F3/4F16/4F29"
                     /calculated_mol_wt=34649
     Region          35..291
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..312
                     /gene="LOC133067276"
                     /coded_by="XM_061158427.1:1..939"
                     /db_xref="GeneID:133067276"
ORIGIN      
        1 mdggnhsvvs efvflglths wgiqllllvf ssvlyaasmt gnilivfsvt tdphlhspmy
       61 fllanlsfid lgacsvtspk micdlfrkrk vissggciaq iffihviggv emvlliamaf
      121 dryvaickpl hylsimsprm cilflaaawa lgvshslfql afivnlpfcg pnvldsfycd
      181 lprllrlact dtyrlqfmvt vnsgficvss ffillisyif illtvwkrss gglskalstl
      241 sahitvvvlf fgptmfvytw phpnsqmdkf laifdailtp flnpviytlr nkemkaamkr
      301 vckklviygt is
//
LOCUS       XP_061014411             312 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4F6-like [Dama dama].
ACCESSION   XP_061014411
VERSION     XP_061014411.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158428.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..312
                     /product="olfactory receptor 4F6-like"
                     /calculated_mol_wt=35481
     Region          32..291
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..312
                     /gene="LOC133067277"
                     /coded_by="XM_061158428.1:1..939"
                     /db_xref="GeneID:133067277"
ORIGIN      
        1 mdqvngsvvt efvllgltqs lrmqfllflf fsvlylgiil gnlfivftvi fdshlhtpmy
       61 vllanlslid lalssttvpr misdlfsdcq iisfhncmlq mffihvtggv emmlliamay
      121 dryiaickpl hyltimnpkm cmflvvaawi tgvthavsqf vfvinlpfcg pnnvgsfycd
      181 fprviklaci dtyelefvvt ansgfismgt fflliisyif ilitvrqhsp khlskafftl
      241 sahitvvflf flpcmflyvw pfptksldtf faivdfvitp vlnpaiytlr nrdmkvvmtr
      301 lsqqlanfre vt
//
LOCUS       XP_061014413             312 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4F6-like [Dama dama].
ACCESSION   XP_061014413
VERSION     XP_061014413.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158430.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..312
                     /product="olfactory receptor 4F6-like"
                     /calculated_mol_wt=35213
     Region          35..291
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..312
                     /gene="LOC133067279"
                     /coded_by="XM_061158430.1:1..939"
                     /db_xref="GeneID:133067279"
ORIGIN      
        1 mdgvndsvvs efvliglsns wkmhlflfwf ffvfymgiil gnffvvftvi idshlhspmy
       61 fllanlsild lglssttvpk misdlftncn iisfpkcmtq iffihvmggv emvlliamaf
      121 drytaickpl hyltimsskm cvsfvvvawi vgiihavsqf vfvinlpfcg pnkidsfycd
      181 lprviklacv dtyklefvii ansgfismat ffsliisyif ilvtvwkrss gdlskafvtl
      241 sahitvvilf fmpcmflyvw pfpttspdky lfiavfaitp vlnptiytlr nkdmriamrr
      301 lgkqivgssg is
//
LOCUS       XP_061014414             303 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4K15-like [Dama dama].
ACCESSION   XP_061014414
VERSION     XP_061014414.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158431.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..303
                     /product="olfactory receptor 4K15-like"
                     /calculated_mol_wt=33829
     Region          26..291
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320354"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..303
                     /gene="LOC133067280"
                     /coded_by="XM_061158431.1:1..912"
                     /db_xref="GeneID:133067280"
ORIGIN      
        1 meeanqsmvs efiflglcds relqkflllp fsalylvtvl gnlfvvllii tdshlhspmy
       61 fllanlsfvd fclssvttpk lttdflkdnk tisfggcmsq ilcvhffggg emvllvtmay
      121 dryvaickpl hyssimnrqk ciglvltswi tgfvhatsql aiildlpfcg privdsffcd
      181 iplviklacm dthtlrllin adsavlattc fvlllisyty ilvtvclrsk dgaskalstc
      241 tshitvvvlf fvpciftylw ppsiswvdkf lavfytvitp llnpaiytlr nkeiknalkr
      301 lih
//
LOCUS       XP_061014415             312 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4F6-like [Dama dama].
ACCESSION   XP_061014415
VERSION     XP_061014415.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158432.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..312
                     /product="olfactory receptor 4F6-like"
                     /calculated_mol_wt=34885
     Region          25..291
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320354"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..312
                     /gene="LOC133067281"
                     /coded_by="XM_061158432.1:10..948"
                     /db_xref="GeneID:133067281"
ORIGIN      
        1 mskanyssvs efvflglsts rpvqhlllaf stvfyviivl gnllivitvt fdpylhspmy
       61 fllanlsfid lcfstltvpk misdlysghk tisfqgcvtq ifvlhtlggs emalltamgf
      121 dryvaickpl hyltivsprv cllllcgawa iglihsvvql afvihlpfcg pneidsfycd
      181 lpwfiklsci dsyrmefmvt ansgfisvgt fflliisyif ilvtvwkcss gglhkalstl
      241 sahisvvvlf fgpcifvymw pfptvpvdkf laildflvtp ilnpaiytlr nkdmkmamrr
      301 lssqllswrk vs
//
LOCUS       XP_061014416             311 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4F15-like [Dama dama].
ACCESSION   XP_061014416
VERSION     XP_061014416.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158433.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..311
                     /product="olfactory receptor 4F15-like"
                     /calculated_mol_wt=34668
     Region          26..291
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320354"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..311
                     /gene="LOC133067282"
                     /coded_by="XM_061158433.1:175..1110"
                     /db_xref="GeneID:133067282"
ORIGIN      
        1 mygrndssvs efvllglsts rpvqdfllaf stvfyvtivl gnllvvfavt fdphlhspmy
       61 fllanlsfid lclstltvpk misdlysghk tisfqgcvtq ifvlhtlggs emalltamgf
      121 dryvaickpl hyltimsprv cllllcgawa iglihsvvql afvihlpfcg pneidsfycd
      181 lpwfiklaci dsyrmefmvt ansgfitmgt fflliisyif ilvtvwkcss gglhkalstl
      241 sahisvvvlf fgpcifvyiw pfptvpvdkf laildflvtp ilnpaiytlr nkdmkmamrr
      301 lscqllslki s
//
LOCUS       XP_061014417             311 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4F6-like [Dama dama].
ACCESSION   XP_061014417
VERSION     XP_061014417.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158434.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..311
                     /product="olfactory receptor 4F6-like"
                     /calculated_mol_wt=34825
     Region          25..291
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320354"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..311
                     /gene="LOC133067283"
                     /coded_by="XM_061158434.1:1..936"
                     /db_xref="GeneID:133067283"
ORIGIN      
        1 myerndtsvs efvflglsts rpvqhfllaf stvfyvtivl gnllvvfavt fdphlhspmy
       61 lllanlsfid lclstltvpk misdlysghk tisfqgcvtq ifvlhtlggs emalltamal
      121 dryvaickpl hyltimsprv cllllcgawa iglihsvvql afvihlpfcg pneidsfycd
      181 lpwfiklsci dsyrmefmvt ansgfismgt fflliisyvf ilvtvwkrss gglhkalstl
      241 sahisvvvlf fgpcifvymc pfpivtvdkf laildflvtp ilnpaiytlr nkdmkmamrr
      301 lcgqflswki s
//
LOCUS       XP_061014419             301 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4K3-like [Dama dama].
ACCESSION   XP_061014419
VERSION     XP_061014419.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158436.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..301
                     /product="olfactory receptor 4K3-like"
                     /calculated_mol_wt=33903
     Region          26..291
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320354"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..301
                     /gene="LOC133067285"
                     /coded_by="XM_061158436.1:1..906"
                     /db_xref="GeneID:133067285"
ORIGIN      
        1 meevnqsvvs efifvglcds wdlqvfllvv fsslylitil gnvfivllvi adlhlhspmy
       61 fllanlsfsd lgfssvttpk litdflkenk tisfrgcmcq mffghffggg emvllvmmay
      121 dryvaickpl hyssimntkm cirlvmtswi igfvhsisql aiitqlpfcg prkldsffcd
      181 iplviklvcm dtyilevltn ansgvlatic filllisysy illtvyhqsk sgvskalstc
      241 tahitvvmlf fgpcifvyic plsitwvdkf lavfyaiitp llnpviytlr nkeirnaikr
      301 l
//
LOCUS       XP_061014420             312 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4K14-like [Dama dama].
ACCESSION   XP_061014420
VERSION     XP_061014420.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158437.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..312
                     /product="olfactory receptor 4K14-like"
                     /calculated_mol_wt=34976
     Region          26..291
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320354"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..312
                     /gene="LOC133067286"
                     /coded_by="XM_061158437.1:4..942"
                     /db_xref="GeneID:133067286"
ORIGIN      
        1 mdagnqsvvs efvllglcqs wtmqvfllpm ffilyliivl gnigiiilii tdphlhspmy
       61 fllanlsfvd mwlcsvttpk mitdfvrenk tisfggcmcq ilfvhffggg emvllvvmay
      121 dryvaickpl hystimnmqk ciglvvtswt igfvhavsqm fvivglpfcg preidsffcd
      181 iplviklaci dsynlgilmn adsgvpamtc fivllisytc illtvhrssk agtcralstc
      241 tahitvvllf fgpcifiyvw plsitwvdkf lavfysvitp llnpaiytlr nkeiknaikr
      301 yrsyythpkg ni
//
LOCUS       XP_061014421             313 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4L1-like [Dama dama].
ACCESSION   XP_061014421
VERSION     XP_061014421.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158438.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..313
                     /product="olfactory receptor 4L1-like"
                     /calculated_mol_wt=35232
     Region          35..292
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          60..86
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(82,85..86,98..103,105..106,109,154,156..160,196,
                     199..201,203..205,207..208,252,255..256,258..259,262,
                     266..267,269..271,274,277..278)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          98..128
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          141..162
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          196..226
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          267..292
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..313
                     /gene="LOC133067287"
                     /coded_by="XM_061158438.1:1..942"
                     /db_xref="GeneID:133067287"
ORIGIN      
        1 mkmmnssmis efvllgltnt welelffffi fllayaaima gnllvvvtit ldsrlhstpm
       61 yfllgnlsfl dmsistittp kmvadfvrkn ktislwgcma qmfflhflgg semtllivma
      121 vdryfaickp lhyttimnhr vlrgsvllsw avgfvhtmsq mvftitlpfc gpnivdnifc
      181 dlplviklac tetyvlellv iadsgllsfi sfilllisyi vilvtvrrqs sgglsralst
      241 lsahitvvtl ffgpcifiya wpfssfsvdk flsvfysvit pllnpiiytl rnqemkaams
      301 rlrtqhvssr ktf
//
LOCUS       XP_061014422             313 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4L1-like [Dama dama].
ACCESSION   XP_061014422
VERSION     XP_061014422.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158439.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..313
                     /product="olfactory receptor 4L1-like"
                     /calculated_mol_wt=35252
     Region          35..292
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          60..86
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(82,85..86,98..103,105..106,109,154,156..160,196,
                     199..201,203..205,207..208,252,255..256,258..259,262,
                     266..267,269..271,274,277..278)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          98..128
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          141..162
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          196..226
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          267..292
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..313
                     /gene="LOC133067288"
                     /coded_by="XM_061158439.1:1..942"
                     /db_xref="GeneID:133067288"
ORIGIN      
        1 mkmmnssmis efvllgltnt welelffffi fllayaaima gnllivvtit ldsrlhstpm
       61 yfllgnlsfl dmslstittp kmvadfvrkn ktislwgcma qmfflhflgg semtllivma
      121 vdryfaickp lhyttimnhr vlrgsvllsw avgfvhtmsq mvftitlpfc gpnivdnifc
      181 dlplviklac tetyvlellv iadsgllsfi sfilllisyi vilvtvrrqs sgglsralst
      241 lsahitvvtl ffgpcifiya wpfssfsvdk flsvfysvit pllnpiiytl rnqemkaaln
      301 rlraqhvnsr ktf
//
LOCUS       XP_061014423             308 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4N5 [Dama dama].
ACCESSION   XP_061014423
VERSION     XP_061014423.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158440.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..308
                     /product="olfactory receptor 4N5"
                     /calculated_mol_wt=34540
     Region          25..291
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          27..51
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          60..82
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          98..120
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          143..159
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          196..219
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          237..259
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..308
                     /gene="LOC133067289"
                     /coded_by="XM_061158440.1:1..927"
                     /db_xref="GeneID:133067289"
ORIGIN      
        1 merenstevt efillgltqs qdvqllvftl vlifyliilp gnfliiltir sdpgltaply
       61 fflgnlafld asysfivapr mlvdflsekk visyrgcitq lfflhflgag emfllvvmaf
      121 dryiaicrpl hystvmnpra cyalllalwl ggfthsivqv aliihlpfcg pnrldnffcd
      181 vpqviklact dtfvvellmv snsglltllc flgllasyav ilcrvkghss egkskalstc
      241 sthiiivflm fgpaifiytr pfrafpadkv vslfhtvifp lmnpviytlr nqevkasmrk
      301 llshhmvc
//
LOCUS       XP_061014424             309 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4L1-like [Dama dama].
ACCESSION   XP_061014424
VERSION     XP_061014424.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158441.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..309
                     /product="olfactory receptor 4L1-like"
                     /calculated_mol_wt=34612
     Region          25..291
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320354"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..309
                     /gene="LOC133067290"
                     /coded_by="XM_061158441.1:1..930"
                     /db_xref="GeneID:133067290"
ORIGIN      
        1 mdlkngsvvt efilqgfsag welqivffvt fsliygatvl gnilimvtvt csstlhspmy
       61 fllgnlsfld mclstvtapk mirdlltehk tisiwgcmaq mffmhlfgga eatllvamaf
      121 dryvavckpl hyrkimnhrl lngfvilswt igfihtmsqm vltvnlpfcg priidnifcd
      181 lplviklacv etytlelfvi adsglwslic fllllvsytv ilatvqrrss rglskalstl
      241 sahitvvslf fgpcifiyaw pfksfasnkv lavfytvitp llnpiiytlr nqkmqvamrk
      301 lqfqnvsst
//
LOCUS       XP_061014425             309 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4L1-like [Dama dama].
ACCESSION   XP_061014425
VERSION     XP_061014425.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158442.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..309
                     /product="olfactory receptor 4L1-like"
                     /calculated_mol_wt=34555
     Region          25..291
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320354"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..309
                     /gene="LOC133067292"
                     /coded_by="XM_061158442.1:1..930"
                     /db_xref="GeneID:133067292"
ORIGIN      
        1 mdlkngsvvt efilqgfsag welqivffvt fsliygatvl gnilimvtvt csstlhspmy
       61 fllgnlsfld mclstvtapk mirdlltehk tisiwgcmaq mffmhlfgga emtlliamaf
      121 drylavckpl hyrkimnhrl lngfvilswt igfihtmsqm vltvnlpfcg priidnifcd
      181 lplviklacv etytlelfvi adsglwslic fllllvsytv ilatvqqrss gglskalstl
      241 sahitvvslf fgpciliyaw pfksfasnkv lavfytvitp llnpviytlr nqkmqeamkk
      301 lrfqnvsst
//
LOCUS       XP_061014426             313 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4Q2 [Dama dama].
ACCESSION   XP_061014426
VERSION     XP_061014426.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158443.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..313
                     /product="olfactory receptor 4Q2"
                     /calculated_mol_wt=35098
     Region          37..290
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          61..83
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          99..121
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          144..160
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          197..220
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          236..258
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          265..290
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..313
                     /gene="LOC133067293"
                     /coded_by="XM_061158443.1:1..942"
                     /db_xref="GeneID:133067293"
ORIGIN      
        1 mdenqtkvvr efilagfsqt qsietglfvl flllyvstwv gnvlimitvv ydnhlnsspm
       61 yfllgnlsfl dlcystvttp klladfldne klipydqciv qlfslhvvga aemflltvma
      121 ydryaaicrp lhyttimrrg lccvlvaasw mggfvhstvq tiltvrlpfc gpnqvdnffc
      181 dvppviklac adtfviellm vsnsglists sfvvlvssya tilvkirske grqkalstcg
      241 shlmvvtlff gpcifiyarp fstfsvdkmv svlynvitpm lnpliytlrn kevksamrkl
      301 wdrsgltwkk qdt
//
LOCUS       XP_061014427             310 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4K14 [Dama dama].
ACCESSION   XP_061014427
VERSION     XP_061014427.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158444.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..310
                     /product="olfactory receptor 4K14"
                     /calculated_mol_wt=35249
     Region          26..292
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320354"
     Region          60..86
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(82,85..86,98..103,105..106,109,154,156..160,196,
                     199..201,203..205,207..208,252,255..256,258..259,262,
                     266..267,269..271,274,277..278)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          98..128
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          141..162
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          196..226
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          267..292
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..310
                     /gene="LOC133067294"
                     /coded_by="XM_061158444.1:1..933"
                     /db_xref="GeneID:133067294"
ORIGIN      
        1 mdlqnyslvs efvlhglcts qylqkfffvf fseiyvvtvl gnliivvtvi fdphlhsspm
       61 yfllgnlsfl diwlasfatp kmirdflsdq klisfrgcma qifflhfvgg aemvllvtma
      121 ydryvaickp lhymtvmsrr tcvglvlvsw vigfvhsisq vaftvnlpyc gpnevdsffc
      181 dlplviklac ldtyvlgilm isdsgllsms cfllllisyt vllinvrqra aggiskalst
      241 csahimvvtl ffgpwifiyv wpfsrfsvdk llsvfytift pllnpliytl rnkemktsmk
      301 klrnrhvtfh
//
LOCUS       XP_061014429             338 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4K15-like isoform X1 [Dama dama].
ACCESSION   XP_061014429
VERSION     XP_061014429.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158446.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..338
                     /product="olfactory receptor 4K15-like isoform X1"
                     /calculated_mol_wt=37817
     Region          50..315
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          50..76
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320354"
     Region          83..109
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(105,108..109,121..126,128..129,132,177,179..183,219,
                     222..224,226..228,230..231,275,278..279,281..282,285,
                     289..290,292..294,297,300..301)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          121..151
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          164..185
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          219..249
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          255..285
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          290..315
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..338
                     /gene="LOC133067295"
                     /coded_by="XM_061158446.1:1..1017"
                     /db_xref="GeneID:133067295"
ORIGIN      
        1 mlstlidicf shiqvtkeks fpksmnetnh sqvtefvllg lsnsqelqpf lflifsllyl
       61 aillgnflii ltvssdshlh tpmyfllanl sfidicvasf atpkmiadfl verktisfna
      121 claqiffvhl ftgsemvilv smaydryvai ckplhymtim srrvcivlvl iswcvgfiht
      181 tsqlaftvnl pfcgpnqvdg ffcdlplvtk lacidtyvvs llivadsgfl slssflllvl
      241 sytvilitvr shssasmaka rstltahitv vtlffgpcif iyvwpfsgys vdkvlavfyt
      301 iftpilnpvi ytlrnkemka amsklrsryl ksgqvlrs
//
LOCUS       XP_061014430             314 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4K15-like isoform X2 [Dama dama].
ACCESSION   XP_061014430
VERSION     XP_061014430.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158447.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..314
                     /product="olfactory receptor 4K15-like isoform X2"
                     /calculated_mol_wt=35100
     Region          26..291
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320354"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..314
                     /gene="LOC133067295"
                     /coded_by="XM_061158447.1:1..945"
                     /db_xref="GeneID:133067295"
ORIGIN      
        1 mnetnhsqvt efvllglsns qelqpflfli fsllylaill gnfliiltvs sdshlhtpmy
       61 fllanlsfid icvasfatpk miadflverk tisfnaclaq iffvhlftgs emvilvsmay
      121 dryvaickpl hymtimsrrv civlvliswc vgfihttsql aftvnlpfcg pnqvdgffcd
      181 lplvtklaci dtyvvslliv adsgflslss flllvlsytv ilitvrshss asmakarstl
      241 tahitvvtlf fgpcifiyvw pfsgysvdkv lavfytiftp ilnpviytlr nkemkaamsk
      301 lrnhyprpqk gsdl
//
LOCUS       XP_061014431             311 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4K1 [Dama dama].
ACCESSION   XP_061014431
VERSION     XP_061014431.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158448.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..311
                     /product="olfactory receptor 4K1"
                     /calculated_mol_wt=35267
     Region          25..291
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320354"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..311
                     /gene="LOC133067296"
                     /coded_by="XM_061158448.1:1..936"
                     /db_xref="GeneID:133067296"
ORIGIN      
        1 mahtnesmvs efvllglsns welqlfffti fsivyvtsvl gnimiivivs sdshlnspmy
       61 fllsnlsfid icqsnfatpk mlvdffvehk tisfegcmaq ifllhsfvgs emmllvamay
      121 drfiaickpl hystimnrrl ciifvfiswa vgilhsvshl aftvdlpfcg pnevdsffcd
      181 lplvielacm dtyemeimtl tnsglislsc flaliisytv ilitvrhrss sgsskalstl
      241 tahitvvilf fgpciyfyiw pfsrlsldkf lsvfytvctp llnpiiyslr nedvksamrk
      301 lrnhhvsfwk n
//
LOCUS       XP_061014432             323 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: olfactory receptor 4K5-like [Dama dama].
ACCESSION   XP_061014432
VERSION     XP_061014432.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158449.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..323
                     /product="LOW QUALITY PROTEIN: olfactory receptor
                     4K5-like"
                     /calculated_mol_wt=36189
     Region          26..291
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320354"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..323
                     /gene="LOC133067297"
                     /coded_by="XM_061158449.1:1..972"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /db_xref="GeneID:133067297"
ORIGIN      
        1 mekvnssvvs efvllglsss qelqrfffvf fsvlyvvtvl gnlliiltvt sdnglhspmy
       61 fllgnlsfvd icqasfatpk miidflsehk tisfsgciaq isfihlltgg emmllvsmay
      121 dryvaickpl hyvgimsrrt ctllvmiswa vglvhtlsql sftvnlpfcg pnvvdsffcd
      181 lprvtklacl dsyiieiliv vnsgilslst fsllvssyii ifitvwfkss aamakafxtl
      241 aahitvvilf fgpcifiymw pfttypvdkv laifytiftp ilnpiiytlr nrdmktalrk
      301 imihylrpkk isempvivrn sly
//
LOCUS       XP_061014433             318 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4K2 [Dama dama].
ACCESSION   XP_061014433
VERSION     XP_061014433.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158450.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..318
                     /product="olfactory receptor 4K2"
                     /calculated_mol_wt=35640
     Region          27..292
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          27..53
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320354"
     Region          60..86
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(82,85..86,98..103,105..106,109,154,156..160,196,
                     199..201,203..205,207..208,252,255..256,258..259,262,
                     266..267,269..271,274,277..278)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          98..128
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          141..162
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          196..226
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          267..292
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..318
                     /gene="LOC133067298"
                     /coded_by="XM_061158450.1:1..957"
                     /db_xref="GeneID:133067298"
ORIGIN      
        1 mmdvvnkstv sdfvllglsk swklqtfffv vfslfyvatm vgnslivitv iadshlhfpm
       61 yflltnlsii dmslasfatp kmitdylsgh ktisfdgcit qifflhlftg teiillmams
      121 fdryiaickp lhyasiispq mcvafvvvsw vvgvmhsmsq vifaltlpfc gpnevdsffc
      181 dlpvvfqlac vntyvlglfm istsgiials cfillfssyv ivlvtirnha skgtskvlst
      241 ctahfivvfm ffgpcifiym wplssflidk ilsvfytift pilnpviytl rnqevktamr
      301 klknklinsn katplhcf
//
LOCUS       XP_061014434             315 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4K3 [Dama dama].
ACCESSION   XP_061014434
VERSION     XP_061014434.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158451.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..315
                     /product="olfactory receptor 4K3"
                     /calculated_mol_wt=35266
     Region          25..291
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320354"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..315
                     /gene="LOC133067299"
                     /coded_by="XM_061158451.1:1..948"
                     /db_xref="GeneID:133067299"
ORIGIN      
        1 mawnnqsvit efilqglsss welqivyflf fsvvyaatvl gnllivlttv seprlhspmy
       61 fllgnlsfid vslasfatpk miadffrepk visfegcitq ifflhllgga eivlliamsf
      121 dryvaickpl ryltimnrrm clglvtlswi vgifhamsql aftvnlpfcg pnevdsffcd
      181 lplviklacv dtyilgvfmi stsgmialvc fillvisysv ilitvrqrss ggsskalstc
      241 sahftvvtlf fgpcifiyvw pftnfpidkv lsvfytiftp llnpviytlr nkdvkdsmrk
      301 lssrvfkssk tdhtp
//
LOCUS       XP_061014435             319 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4K2-like [Dama dama].
ACCESSION   XP_061014435
VERSION     XP_061014435.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158452.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..319
                     /product="olfactory receptor 4K2-like"
                     /calculated_mol_wt=35862
     Region          25..291
                     /region_name="7tmA_OR4-like"
                     /note="olfactory receptor family 4 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15226"
                     /db_xref="CDD:320354"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320354"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320354"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320354"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320354"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320354"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320354"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320354"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320354"
     CDS             1..319
                     /gene="LOC133067300"
                     /coded_by="XM_061158452.1:1..960"
                     /db_xref="GeneID:133067300"
ORIGIN      
        1 megfnhsrvs efvllgltds pqlqiflfvm fsvfylmtll gnclilltvl stphlhspmy
       61 yllsnlslid mclssfatpk mimdffaqhk tisfegcisq ifflhlftgt eivllismsf
      121 dryiaickpl hyssimsqrv cvglvatswt vgflhtmsql aftlylpfcg pnvvdsffcd
      181 lplviqlaci diyvlgifmi stsgvialvs flllltsyit vlvtlkdhss tgsskafstc
      241 tahfivvlmf fgpcifiyvw pftdflvdkv lsvfytiftp flnplvytlr nqevktavkk
      301 klsnqylnlg kttpiysvq
//
LOCUS       XP_061014436             306 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: olfactory receptor 4N2-like [Dama dama].
ACCESSION   XP_061014436
VERSION     XP_061014436.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158453.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..306
                     /product="LOW QUALITY PROTEIN: olfactory receptor
                     4N2-like"
                     /calculated_mol_wt=34104
     Region          24..290
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          26..50
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          59..81
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          97..119
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          142..158
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          195..218
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          236..258
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          265..290
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..306
                     /gene="LOC133067301"
                     /coded_by="XM_061158453.1:1..921"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:133067301"
ORIGIN      
        1 mennstvvke filggltqsq niqllvfvlv lifyliilpg nfliiltirs dpgltaplyf
       61 flgnlaflda sysfivaprm lvdflsekkv isyrxcitql fflhflggge glllvvmafd
      121 ryiaicrplh ysavmsprtc yalllalwfg gfvhsiiqva lilrlpfcgp nrldnffcdv
      181 pqviklactd tfvvellmvf nsglmtllcf lgllasyafi lcrvhgssse gkskalstct
      241 thiiiiflmf gpgifiytrp frafpadkvv slfhtvifpl lnpviytlrn qevkasvkrl
      301 fsqhla
//
LOCUS       XP_061014437             308 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4N2-like [Dama dama].
ACCESSION   XP_061014437
VERSION     XP_061014437.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158454.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..308
                     /product="olfactory receptor 4N2-like"
                     /calculated_mol_wt=34454
     Region          25..291
                     /region_name="7tmA_OR4N-like"
                     /note="olfactory receptor 4N, 4M, and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15937"
                     /db_xref="CDD:320603"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320603"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320603"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320603"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320603"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320603"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320603"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320603"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320603"
     CDS             1..308
                     /gene="LOC133067303"
                     /coded_by="XM_061158454.1:1..927"
                     /db_xref="GeneID:133067303"
ORIGIN      
        1 merenstvvt efilagltqs qniqllvftl vliffliilp gnfliiltir sdpgltaply
       61 fflgnlafld vsysfivapr mlvdflsekk visyrgcitq lfflhflggg emillivmaf
      121 dryiaicrpl hysavmsprt cyalllalwf ggfvhsiiqv alilrlpfcg pnrldnffcd
      181 vpqviklact dtfvvellmv fnsglltllc fvgllasyaf ilcrvhgsst egkskalstc
      241 tthiiiiflm fgpaifiytr pftalsadkv vslfhtvifp lmnpviytlr nqevkasmrk
      301 ilgqhmvc
//
LOCUS       XP_061014438             308 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4N4C [Dama dama].
ACCESSION   XP_061014438
VERSION     XP_061014438.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158455.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..308
                     /product="olfactory receptor 4N4C"
                     /calculated_mol_wt=34574
     Region          25..291
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          27..51
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          60..82
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          98..120
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          143..159
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          196..219
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          237..259
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..308
                     /gene="LOC133067304"
                     /coded_by="XM_061158455.1:1..927"
                     /db_xref="GeneID:133067304"
ORIGIN      
        1 mkienstvvt efillgliqs qniqllvfvl ilifyiiilp gnfliiftir sdpgltaply
       61 fflgnlafld asysfivapr mlvdflsekk visyrgcitq lfflhflggg eglllvvmaf
      121 dryiaicrpl hysavmsprt cyalllalwf ggfvhsiiqv alilrlpfcg pnrldnffcd
      181 vpqviklact dtfvvellmv fnsglltllc fvgllasyav ilcrvhhsst egkskalstc
      241 tthviiillm fgpaifiytr pftalsadkv vsffhtvifp lmnpviytlr nqevkasmrr
      301 ilsrhvff
//
LOCUS       XP_061014439             313 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4M1 [Dama dama].
ACCESSION   XP_061014439
VERSION     XP_061014439.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158456.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..313
                     /product="olfactory receptor 4M1"
                     /calculated_mol_wt=35561
     Region          25..293
                     /region_name="7tmA_OR4N-like"
                     /note="olfactory receptor 4N, 4M, and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15937"
                     /db_xref="CDD:320603"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320603"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320603"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,253,256..257,259..260,263,
                     267..268,270..272,275,278..279)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320603"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320603"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320603"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320603"
     Region          233..263
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320603"
     Region          268..293
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320603"
     CDS             1..313
                     /gene="LOC133067305"
                     /coded_by="XM_061158456.1:1..942"
                     /db_xref="GeneID:133067305"
ORIGIN      
        1 metanytrvt efvltglsqa revqlvlfvi flsfylfilp vniliictir ldphltspmy
       61 fllanlafld iwyssitapk mlvdffverk visfggciaq lfflhfvgas emflltvmaf
      121 dryaaicrpl hyatimnrrl ccilvafswv ggfihstiqv alivrlpfcg pneldsyfcd
      181 itqvvriaca ytfpeelvmi fssglisvvc fiallmsyaf llvmlkkhsg sgestsrams
      241 tcyshitivv lmfgpsiyiy arpfdsfspd kvvsvfhtvi fpllnpiiyt lrnkevkmam
      301 rklvnryilc kek
//
LOCUS       XP_061014440             317 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 11H12-like [Dama dama].
ACCESSION   XP_061014440
VERSION     XP_061014440.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158457.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..317
                     /product="olfactory receptor 11H12-like"
                     /calculated_mol_wt=35478
     Region          32..300
                     /region_name="7tmA_OR11G-like"
                     /note="olfactory receptor OR11G and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15913"
                     /db_xref="CDD:320579"
     Region          32..58
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320579"
     Region          65..91
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320579"
     Site            order(87,90..91,103..108,110..111,114,159,161..165,201,
                     204..206,208..210,212..213,258,261..262,264..265,268,
                     274..275,277..279,282,285..286)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320579"
     Region          103..133
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320579"
     Region          146..167
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320579"
     Region          201..231
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320579"
     Region          238..268
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320579"
     Region          275..300
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320579"
     CDS             1..317
                     /gene="LOC133067306"
                     /coded_by="XM_061158457.1:19..972"
                     /db_xref="GeneID:133067306"
ORIGIN      
        1 mnmnisepds rfafvrefil lgfscewkiq sllfslfltv yaltltgnga iicalwcdqr
       61 lhipmyiflg nfsfleiwyv sstvpkmlvn flsdkktisf vgcflqfyff sslgateclh
      121 ltvmafdryl aicrplhypn imtghlctkl vlicwvcgfl wflipivlis rmpfcgpnii
      181 dhvvcdpgpl falacvsapk tqtlcyslss ivifgnflfi lgsytlvlta vlrmpsatgr
      241 qkafstcgsh lavvslfygs lmvmyvspgl ghsagmqkva tlfyalvtpf fnpliyslrn
      301 keiktalrrv lgsfnim
//
LOCUS       XP_061014441             315 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 11H12-like [Dama dama].
ACCESSION   XP_061014441
VERSION     XP_061014441.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158458.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..315
                     /product="olfactory receptor 11H12-like"
                     /calculated_mol_wt=35248
     Region          30..298
                     /region_name="7tmA_OR11G-like"
                     /note="olfactory receptor OR11G and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15913"
                     /db_xref="CDD:320579"
     Region          30..56
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320579"
     Region          63..89
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320579"
     Site            order(85,88..89,101..106,108..109,112,157,159..163,199,
                     202..204,206..208,210..211,256,259..260,262..263,266,
                     272..273,275..277,280,283..284)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320579"
     Region          101..131
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320579"
     Region          144..165
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320579"
     Region          199..229
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320579"
     Region          236..266
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320579"
     Region          273..298
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320579"
     CDS             1..315
                     /gene="LOC133067307"
                     /coded_by="XM_061158458.1:13..960"
                     /db_xref="GeneID:133067307"
ORIGIN      
        1 mnisepdssf asvrefillg fscewkiqsl lfslflttya ltltgngaii calwcdqrlh
       61 ipmyiflrsf sfleiwyvss tvpkmlvnfl sdkktisfvg cflqfyfffs lgttecllla
      121 vmafdrylai crplhypnim tghlctklvl icwvcgflwf lipivlisrm pfcgpniidh
      181 vvcdpgplfa lacvsapktq tlcyslssiv ifgnflfilg sytlvltavl rmpsatgrqk
      241 afstcgshla vvslfygslm vmyvspglgh sagmqkvatl fyamvtplfn pfiysfrnke
      301 ikaalrkllg nfnim
//
LOCUS       XP_061014442             312 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 11G2-like [Dama dama].
ACCESSION   XP_061014442
VERSION     XP_061014442.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158459.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..312
                     /product="olfactory receptor 11G2-like"
                     /calculated_mol_wt=34916
     Region          29..298
                     /region_name="7tmA_OR11G-like"
                     /note="olfactory receptor OR11G and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15913"
                     /db_xref="CDD:320579"
     Region          30..56
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320579"
     Region          63..89
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320579"
     Site            order(85,88..89,101..106,108..109,112,157,159..163,199,
                     202..204,206..208,210..211,256,259..260,262..263,266,
                     272..273,275..277,280,283..284)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320579"
     Region          101..131
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320579"
     Region          144..165
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320579"
     Region          199..229
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320579"
     Region          236..266
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320579"
     Region          273..298
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320579"
     CDS             1..312
                     /gene="LOC133067308"
                     /coded_by="XM_061158459.1:1..939"
                     /db_xref="GeneID:133067308"
ORIGIN      
        1 mhvlhnknvt asfhefillg flcsqeieil lfvlfsiiyi ltllgnsaii cavwwdqqlh
       61 tpmyillanf sfleicyins nvpsmlfnll sktktisyhg cilqfyifls lcatelffla
      121 lmafdryvai crplhyptim trkvcgtlvs aswvagflwl vtpaalisqv pfcgsniidh
      181 ylcdlgamla iscvpvpkta ltcstfsavi tfitlfyilv sytlvlravv qvpkgssrrk
      241 afstctshli vvflfygsvt vmyvspgvas qpgrqkfltm lysiatplln pliyslrnke
      301 mkvalkkimc kl
//
LOCUS       XP_061014443             312 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 11H6-like [Dama dama].
ACCESSION   XP_061014443
VERSION     XP_061014443.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158460.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..312
                     /product="olfactory receptor 11H6-like"
                     /calculated_mol_wt=35089
     Region          27..298
                     /region_name="7tmA_OR11G-like"
                     /note="olfactory receptor OR11G and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15913"
                     /db_xref="CDD:320579"
     Region          28..54
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320579"
     Region          61..87
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320579"
     Site            order(83,86..87,99..104,106..107,110,155,157..161,199,
                     202..204,206..208,210..211,256,259..260,262..263,266,
                     272..273,275..277,280,283..284)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320579"
     Region          99..129
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320579"
     Region          142..163
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320579"
     Region          199..229
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320579"
     Region          236..266
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320579"
     Region          273..298
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320579"
     CDS             1..312
                     /gene="LOC133067309"
                     /coded_by="XM_061158460.1:1..939"
                     /db_xref="GeneID:133067309"
ORIGIN      
        1 mskarnishv vsefillgfp crweieiflf siffityilt llgniaivca vrwdrrlhtp
       61 myillanfsf leicyvnsdv pnmlanffsq tktisfarcl lqlyfffslg taeclflsim
      121 aydrflaicr plhyptimtt kfcsslvifc wvygflwfli pvilvtrlpf cgpnviddfl
      181 cdlgpllala sacvpapgtv licgtmssll ifatffyisg sytlvlrvvm qvpsvagrkk
      241 afstcsshla vvflfyssvm mtyvspgsgq aegmqkfttl fysvltpffn pmiyslrnke
      301 mkdalkkvvg gs
//
LOCUS       XP_061014444             311 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 11G2-like [Dama dama].
ACCESSION   XP_061014444
VERSION     XP_061014444.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158461.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..311
                     /product="olfactory receptor 11G2-like"
                     /calculated_mol_wt=34915
     Region          29..298
                     /region_name="7tmA_OR11G-like"
                     /note="olfactory receptor OR11G and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15913"
                     /db_xref="CDD:320579"
     Region          30..56
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320579"
     Region          63..89
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320579"
     Site            order(85,88..89,101..106,108..109,112,157,159..163,199,
                     202..204,206..208,210..211,256,259..260,262..263,266,
                     272..273,275..277,280,283..284)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320579"
     Region          101..131
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320579"
     Region          144..165
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320579"
     Region          199..229
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320579"
     Region          236..266
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320579"
     Region          273..298
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320579"
     CDS             1..311
                     /gene="LOC133067310"
                     /coded_by="XM_061158461.1:1..936"
                     /db_xref="GeneID:133067310"
ORIGIN      
        1 mkiyntpnts saitgfillg fpcpreaqil lfvlfsavyl ltlmgnssii cavcwdqrlh
       61 tpmyillanf sfleiwyvts tvpnmlanfl sdnklisfsg cflqfyfffs lgstecffla
      121 imafdrylai cwplhyptlm trhfctnlvi scwvlgflwf lipiiiisqm sfcgsriidh
      181 flcdpgplla ltctrvpvie ltsstlssll lfipflfimv syalvlqavl kvpsaagrrk
      241 afstcgshlt vvslfygsvm vmyvsptseh dagmqkivtl fysvvtplin pviyslrnkd
      301 mkhamkkllg t
//
LOCUS       XP_061014445             319 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 11G2-like isoform X1 [Dama dama].
ACCESSION   XP_061014445
VERSION     XP_061014445.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158462.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..319
                     /product="olfactory receptor 11G2-like isoform X1"
                     /calculated_mol_wt=35569
     Region          37..306
                     /region_name="7tmA_OR11G-like"
                     /note="olfactory receptor OR11G and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15913"
                     /db_xref="CDD:320579"
     Region          38..64
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320579"
     Region          71..97
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320579"
     Site            order(93,96..97,109..114,116..117,120,165,167..171,207,
                     210..212,214..216,218..219,264,267..268,270..271,274,
                     280..281,283..285,288,291..292)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320579"
     Region          109..139
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320579"
     Region          152..173
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320579"
     Region          207..237
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320579"
     Region          244..274
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320579"
     Region          281..306
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320579"
     CDS             1..319
                     /gene="LOC133067311"
                     /coded_by="XM_061158462.1:1..960"
                     /db_xref="GeneID:133067311"
ORIGIN      
        1 mtfsklqhmk iyntpntssa itgfillgfp cpreaqillf vlfsavyllt lmgngsiica
       61 vcwdqrlhtp myillanfsf leiwyvtstv pnmlanflsn tklisfsgcl lqfyfffslg
      121 stesfflaim afdrylaicq plhypilmtg hlctnlvisc wvlgflwfli pviiisqmsf
      181 cgsrvidhfl cdpgpllalt cekapvmelv fstlspipli ilflfimgsy alvikavlkv
      241 psaagqrkaf stcgshltvv slfygsvvvm ygspasehga rmqvtvtlfy svvtpllnpi
      301 iyslrnkdmk kalkkflrl
//
LOCUS       XP_061014446             311 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 11G2-like isoform X2 [Dama dama].
ACCESSION   XP_061014446
VERSION     XP_061014446.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158463.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..311
                     /product="olfactory receptor 11G2-like isoform X2"
                     /calculated_mol_wt=34596
     Region          29..298
                     /region_name="7tmA_OR11G-like"
                     /note="olfactory receptor OR11G and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15913"
                     /db_xref="CDD:320579"
     Region          30..56
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320579"
     Region          63..89
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320579"
     Site            order(85,88..89,101..106,108..109,112,157,159..163,199,
                     202..204,206..208,210..211,256,259..260,262..263,266,
                     272..273,275..277,280,283..284)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320579"
     Region          101..131
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320579"
     Region          144..165
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320579"
     Region          199..229
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320579"
     Region          236..266
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320579"
     Region          273..298
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320579"
     CDS             1..311
                     /gene="LOC133067311"
                     /coded_by="XM_061158463.1:91..1026"
                     /db_xref="GeneID:133067311"
ORIGIN      
        1 mkiyntpnts saitgfillg fpcpreaqil lfvlfsavyl ltlmgngsii cavcwdqrlh
       61 tpmyillanf sfleiwyvts tvpnmlanfl sntklisfsg cllqfyfffs lgstesffla
      121 imafdrylai cqplhypilm tghlctnlvi scwvlgflwf lipviiisqm sfcgsrvidh
      181 flcdpgplla ltcekapvme lvfstlspip liilflfimg syalvikavl kvpsaagqrk
      241 afstcgshlt vvslfygsvv vmygspaseh garmqvtvtl fysvvtplln piiyslrnkd
      301 mkkalkkflr l
//
LOCUS       XP_061014447             311 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 11G2-like [Dama dama].
ACCESSION   XP_061014447
VERSION     XP_061014447.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158464.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..311
                     /product="olfactory receptor 11G2-like"
                     /calculated_mol_wt=34664
     Region          29..298
                     /region_name="7tmA_OR11G-like"
                     /note="olfactory receptor OR11G and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15913"
                     /db_xref="CDD:320579"
     Region          30..56
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320579"
     Region          63..89
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320579"
     Site            order(85,88..89,101..106,108..109,112,157,159..163,199,
                     202..204,206..208,210..211,256,259..260,262..263,266,
                     272..273,275..277,280,283..284)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320579"
     Region          101..131
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320579"
     Region          144..165
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320579"
     Region          199..229
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320579"
     Region          236..266
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320579"
     Region          273..298
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320579"
     CDS             1..311
                     /gene="LOC133067313"
                     /coded_by="XM_061158464.1:1..936"
                     /db_xref="GeneID:133067313"
ORIGIN      
        1 mkisntfnts saitgfillg fpcpregqil lfvlfsavyl ltlmgngsii cavcwdqrlh
       61 tpmyillanf sfleiwyvts tvpnmlanfl sdnklisfsg cllqfyfffs lgstecffla
      121 imafdrylai cwplhyptlm tgrlcanlii scwvfgflwf lipiiiisqm sfcgsgiidh
      181 flcdpgplla ltcekvpvie lvfstlsplp liipflfimg syalvlravl kvpsaagrkk
      241 afstcgshlt vvslfygsvl vmygsptseh eagmqkivtl fysvvtplln pviyslrnkd
      301 mkkalqkflr l
//
LOCUS       XP_061014448             314 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 11H7 [Dama dama].
ACCESSION   XP_061014448
VERSION     XP_061014448.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158465.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..314
                     /product="olfactory receptor 11H7"
                     /calculated_mol_wt=35261
     Region          25..294
                     /region_name="7tmA_OR11G-like"
                     /note="olfactory receptor OR11G and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15913"
                     /db_xref="CDD:320579"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320579"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320579"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,252,255..256,258..259,262,
                     268..269,271..273,276,279..280)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320579"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320579"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320579"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320579"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320579"
     Region          269..294
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320579"
     CDS             1..314
                     /gene="LOC133067314"
                     /coded_by="XM_061158465.1:28..972"
                     /db_xref="GeneID:133067314"
ORIGIN      
        1 mnksgistvt qfvllgfpgp wkmqiiffsm illvyiltlt gniaimcavm wdhrlhtpmy
       61 vflanfsfle vwyvtctvpn mlvnflsktk tisfsgcftq fyfffslgtt ecfflcvmay
      121 drylaicrpl hyptimtgkl cailvslcwl tgflgysvpi lfisqlpycg pniidhflcd
      181 vdplialsca sspiiehvfh svssliitlt ilyilgsytl vvravlrvps ssgrqkafst
      241 cgshlvvvsl fygtimvmyv rptsgnsvam hkiitliysv vtpvlnpfiy slrnrdmkfa
      301 lhqvlcgmri mqts
//
LOCUS       XP_061014450             314 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 11H6-like [Dama dama].
ACCESSION   XP_061014450
VERSION     XP_061014450.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158467.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..314
                     /product="olfactory receptor 11H6-like"
                     /calculated_mol_wt=34898
     Region          25..294
                     /region_name="7tmA_OR11G-like"
                     /note="olfactory receptor OR11G and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15913"
                     /db_xref="CDD:320579"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320579"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320579"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,252,255..256,258..259,262,
                     268..269,271..273,276,279..280)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320579"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320579"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320579"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320579"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320579"
     Region          269..294
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320579"
     CDS             1..314
                     /gene="LOC133067316"
                     /coded_by="XM_061158467.1:1..945"
                     /db_xref="GeneID:133067316"
ORIGIN      
        1 mnvsgvntvt efillsfpcs revqvllfvl fsvsyiltlm gngaivfavk ldhrlhtpmy
       61 tllanfsfle mcyinttvpn mlrnflsetk tisftacflq fyfffsmgtt etfllplmaf
      121 drylaicrpl hyptimssrl cinlvglcwv taflcypvpi yfitqlpfcg pntidhfvcd
      181 pgpllalsci papgielscs ilssliifst fffilgsytl vlravlrvps aagrrkafst
      241 cgshlvvvsl fygtlmvmyi sptsgnpagi qksvtlfyss ltplvnpliy slrnkdmkaa
      301 ltkiqkctki sqse
//
LOCUS       XP_061014451             314 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 11H4 [Dama dama].
ACCESSION   XP_061014451
VERSION     XP_061014451.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158468.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..314
                     /product="olfactory receptor 11H4"
                     /calculated_mol_wt=35656
     Region          25..294
                     /region_name="7tmA_OR11G-like"
                     /note="olfactory receptor OR11G and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15913"
                     /db_xref="CDD:320579"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320579"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320579"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,252,255..256,258..259,262,
                     268..269,271..273,276,279..280)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320579"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320579"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320579"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320579"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320579"
     Region          269..294
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320579"
     CDS             1..314
                     /gene="LOC133067317"
                     /coded_by="XM_061158468.1:25..969"
                     /db_xref="GeneID:133067317"
ORIGIN      
        1 mnrsethivt efvllgfpgc weiqiflfsl flvvyaltlv gngaiicavk wdprlytpmy
       61 fllgnfafle iwyvsstvpn mlvnilsktk aisfsgcflq fyfffslgta eclflavmay
      121 dryqaichpl hypiimtrrl cgmlvslcwl igflgypipi ffisqlpfcg pniidhflcd
      181 mdplmalsca papitefify tqsslvlfft lmyilrsytl llravfqips tagrrkafst
      241 cgshltvvsl fygtvmvmyv sptygisalm qkiltlvysi mtpllnpliy slrnkdmkla
      301 lrnvlfgrri sqns
//
LOCUS       XP_061014452             800 aa            linear   MAM 02-DEC-2023
DEFINITION  kelch-like protein 33 [Dama dama].
ACCESSION   XP_061014452
VERSION     XP_061014452.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158469.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..800
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..800
                     /product="kelch-like protein 33"
                     /calculated_mol_wt=86120
     Region          98..196
                     /region_name="BTB1_POZ_KLHL33"
                     /note="first BTB (Broad-Complex, Tramtrack and Bric a
                     brac)/POZ (poxvirus and zinc finger) domain found in
                     Kelch-like protein 33 (KLHL33); cd18262"
                     /db_xref="CDD:349571"
     Region          227..344
                     /region_name="BTB2_POZ_KLHL33"
                     /note="second BTB (Broad-Complex, Tramtrack and Bric a
                     brac)/POZ (poxvirus and zinc finger) domain found in
                     Kelch-like protein 33 (KLHL33); cd18263"
                     /db_xref="CDD:349572"
     Region          337..411
                     /region_name="BACK_KLHL33"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     Kelch-like protein 33 (KLHL33); cd18472"
                     /db_xref="CDD:350547"
     Region          514..748
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          528..576
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          579..622
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          626..672
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          675..720
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          722..768
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..800
                     /gene="KLHL33"
                     /coded_by="XM_061158469.1:1..2403"
                     /db_xref="GeneID:133067318"
ORIGIN      
        1 mslsdstghp saaeqvsllv qkddldlplp trrtpswpps pdedpglppf pleepgprpm
       61 tpgslpspal sleeeeeeed eedgedsaep eglcseehps qffaeaqrlr eqrllldeev
      121 svggraygvh rvilaavssl frgrllggrg pqsplsldit paaweavltf ayegvlgpap
      181 redvlvaaea lgaprvkaaa qwgrqgagsg redekqtsqa eelrenlrsi ellyqegigc
      241 dleleaggcr lrvhraalac gseffgamll sgmresqgte vslhtisaqd lrllvsfays
      301 gvvrakwpgl lraaqaalqy qsssclalcq kalarglspa rclalipmae apglerlwsk
      361 arhyllshlp avalcstfpt lpaaclaell dsdelhlqee feafvaarrw laanpdtqes
      421 dakallrcvr fgrmstrelr rvraaglppp lspdllhqvm veaevpgqer rrepdqalvv
      481 iggdglrsdm aarepsrgvw warafrcgig lvrtvewgrl palpapgrfr hgaaslagsv
      541 lyvcggqdfy shantlastl rwdpsqedwe emaplcqprs lfplvaldgl lyalggrdsg
      601 ialrsvetyn pelnvwrlap plpaprfaha aavlegqlyl sggcsetgqy qasllhydpk
      661 lekpatllsp mgvpraghvm aalggrlyva gglgqtgdll sfeaydpstg swthltplps
      721 phvgaagavl qgellvlggy shrtyapshl ihaycpglgr wlclgtlprp raempacilt
      781 lpavqhvalv ptrhqtkpag
//
LOCUS       XP_061014453             212 aa            linear   MAM 02-DEC-2023
DEFINITION  inactive ribonuclease-like protein 10 [Dama dama].
ACCESSION   XP_061014453
VERSION     XP_061014453.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158470.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..212
                     /product="inactive ribonuclease-like protein 10"
                     /calculated_mol_wt=23439
     Region          104..208
                     /region_name="RNase_A"
                     /note="RNase A family, or Pancreatic RNases family;
                     includes vertebrate RNase homologs to the bovine
                     pancreatic ribonuclease A (RNase A). Many of these enzymes
                     have special biological activities; for example, some
                     stimulate the development of vascular...; cd00163"
                     /db_xref="CDD:119386"
     Site            order(131,135,161,173,207..208)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:119386"
     Site            order(132,164,175,191,193,195..196,198)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:119386"
     CDS             1..212
                     /gene="RNASE10"
                     /coded_by="XM_061158470.1:1..639"
                     /db_xref="GeneID:133067319"
ORIGIN      
        1 mkltlvqiff mmlllllglg vglglglqma aavleesdql ldeflssdsq dkveatkegl
       61 dsrsvetllv snkevvqped titsedevgg drmlraevll enkdylrsdm mdrecnalma
      121 pklkskdhac ipqyifihee leavkavcks pavacdlkgg kchksprpfd ltfcklsksg
      181 qviphcnyvt filekyilms csdmkvqits es
//
LOCUS       XP_061014454             208 aa            linear   MAM 02-DEC-2023
DEFINITION  inactive ribonuclease-like protein 9 [Dama dama].
ACCESSION   XP_061014454
VERSION     XP_061014454.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158471.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..208
                     /product="inactive ribonuclease-like protein 9"
                     /calculated_mol_wt=23805
     Region          80..203
                     /region_name="RnaseA"
                     /note="Pancreatic ribonuclease; pfam00074"
                     /db_xref="CDD:459661"
     Site            order(90,119,123,149,161,201..202)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:119386"
     Site            order(120,152,163,178,180,182..183,185)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:119386"
     CDS             1..208
                     /gene="RNASE9"
                     /coded_by="XM_061158471.1:1..627"
                     /db_xref="GeneID:133067320"
ORIGIN      
        1 mglhgnrrys ltvditpsll cslqgnmgal inmqplfllf lllkplqfvr indpslsder
       61 reeledyldd lyatgptkpp tkeafkthvi insempltdq dycnqemkmk rvhnrlhcvk
      121 ehfflqasyn diqelchnif vqctngvrkc hrsqqiisgv hcalksgtmm pfceytssyr
      181 egwvlitcqw ddivgeiipv svidilpi
//
LOCUS       XP_061014455             198 aa            linear   MAM 02-DEC-2023
DEFINITION  probable ribonuclease 11 [Dama dama].
ACCESSION   XP_061014455
VERSION     XP_061014455.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158472.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..198
                     /product="probable ribonuclease 11"
                     /calculated_mol_wt=22082
     Region          72..181
                     /region_name="RNase_A"
                     /note="RNase A family, or Pancreatic RNases family;
                     includes vertebrate RNase homologs to the bovine
                     pancreatic ribonuclease A (RNase A). Many of these enzymes
                     have special biological activities; for example, some
                     stimulate the development of vascular...; cl00128"
                     /db_xref="CDD:469623"
     Site            order(115,147,158,173,175,177..178,180)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:119386"
     CDS             1..198
                     /gene="RNASE11"
                     /coded_by="XM_061158472.1:1..597"
                     /db_xref="GeneID:133067321"
ORIGIN      
        1 meiffllllg lgvifagvse simeiikeef lekevqydma ksdqekqtie vlinltvlyr
       61 ntslsmskdv ssslltfrrl hhslppkrnp dnnkhycndm tvwrkvsean gsfklsnnfi
      121 hgsvevvdgv pkapsckygq tsciscsetp elrtttcqfi vgkqspscqh hgvtslkkil
      181 vvltshslms wlvsisnl
//
LOCUS       XP_061014456             154 aa            linear   MAM 02-DEC-2023
DEFINITION  ribonuclease K6 [Dama dama].
ACCESSION   XP_061014456
VERSION     XP_061014456.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158473.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..154
                     /product="ribonuclease K6"
                     /calculated_mol_wt=17291
     Region          33..151
                     /region_name="RnaseA"
                     /note="Pancreatic ribonuclease; pfam00074"
                     /db_xref="CDD:459661"
     Site            order(38..47,53,55..57,65,68..73,106,124,147)
                     /site_type="active"
                     /note="dimerization with domain swap [active]"
                     /db_xref="CDD:119387"
     Site            order(42,65,69,95,107,149..150)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:119387"
     Site            order(66,98,109,123,125,127..128,130)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:119387"
     CDS             1..154
                     /gene="RNASE6"
                     /coded_by="XM_061158473.1:266..730"
                     /db_xref="GeneID:133067322"
ORIGIN      
        1 mgphllgrss vlllllgmww avrplgavpk nltkarwfei qhiqpgllpc nkamsgvnny
       61 trhckpentf lhssfqdvia vcdlpniick ngqhnchqsp kpvnltqcnf iagrypdcry
      121 hdaaqykffv vacdppqktd ppyhlvpvhl dkiv
//
LOCUS       XP_061014457             139 aa            linear   MAM 02-DEC-2023
DEFINITION  ribonuclease 4-like, partial [Dama dama].
ACCESSION   XP_061014457
VERSION     XP_061014457.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158474.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..>139
                     /product="ribonuclease 4-like"
     Region          29..132
                     /region_name="RNAse_Pc"
                     /note="Pancreatic ribonuclease; smart00092"
                     /db_xref="CDD:128403"
     Site            order(36..45,52,56,58..60,68,71..76,106,125)
                     /site_type="active"
                     /note="dimerization with domain swap [active]"
                     /db_xref="CDD:119387"
     Site            order(69,100,109,124,126,128..129,131)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:119387"
     CDS             1..139
                     /gene="LOC133067324"
                     /coded_by="XM_061158474.1:40..>456"
                     /db_xref="GeneID:133067324"
ORIGIN      
        1 malqqtqvfl lflllsllgl glvqpsygqd rmyqrflrqh vdpdetggnd gycnlmmqrr
       61 kmtshqckhf ntfihedlwn irsicttniq fqngrmnche gvemvtdcre tgssrapncr
      121 yrakasttrm cvlscfghv
//
LOCUS       XP_061014458             146 aa            linear   MAM 02-DEC-2023
DEFINITION  epididymal secretory protein E3-beta [Dama dama].
ACCESSION   XP_061014458
VERSION     XP_061014458.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158475.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..146
                     /product="epididymal secretory protein E3-beta"
                     /calculated_mol_wt=17697
     CDS             1..146
                     /gene="EDDM3B"
                     /coded_by="XM_061158475.1:1..441"
                     /db_xref="GeneID:133067325"
ORIGIN      
        1 mastlkvlgs lwallftlcg llvhsqnlsw refmkqhhls tnwefskykc ndlmrergip
       61 kdkkyhifiy tlwhkieric lrnwrdryrn vyiwapdpfk tlkcirknsk snyedyksys
      121 yiefhcsmng fvdvvedmrl ledinn
//
LOCUS       XP_061014459             177 aa            linear   MAM 02-DEC-2023
DEFINITION  brain ribonuclease [Dama dama].
ACCESSION   XP_061014459
VERSION     XP_061014459.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158476.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..177
                     /product="brain ribonuclease"
                     /calculated_mol_wt=19453
     Region          27..150
                     /region_name="RNAse_Pc"
                     /note="Pancreatic ribonuclease; smart00092"
                     /db_xref="CDD:128403"
     Site            order(34..43,51,55,57..59,67,70..75,108,127,143)
                     /site_type="active"
                     /note="dimerization with domain swap [active]"
                     /db_xref="CDD:119387"
     Site            order(38,67,71,97,109,145..146)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:119387"
     Site            order(68,100,111,126,128,130..131,133)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:119387"
     CDS             1..177
                     /gene="LOC133067326"
                     /coded_by="XM_061158476.1:82..615"
                     /db_xref="GeneID:133067326"
ORIGIN      
        1 malkslvllp llvlvlllvr vqpslgkesa aakfrrqhmd agssssgnan ycnqmmkrrr
       61 mthgrckpvn tfvhesldsv kavcsqknit ckngqpncyq snstmnitdc retgsskypn
      121 cayktsqkqk yitvacegnp yvpvhfdgsv flpatplpsl paphkhrllw legnnss
//
LOCUS       XP_061014460             154 aa            linear   MAM 02-DEC-2023
DEFINITION  seminal ribonuclease-like [Dama dama].
ACCESSION   XP_061014460
VERSION     XP_061014460.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158477.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..154
                     /product="seminal ribonuclease-like"
                     /calculated_mol_wt=16758
     Region          27..150
                     /region_name="RNAse_Pc"
                     /note="Pancreatic ribonuclease; smart00092"
                     /db_xref="CDD:128403"
     Site            order(34..43,51,55,57..59,67,70..75,108,127,143)
                     /site_type="active"
                     /note="dimerization with domain swap [active]"
                     /db_xref="CDD:119387"
     Site            order(38,67,71,97,109,145..146)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:119387"
     Site            order(68,100,111,126,128,130..131,133)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:119387"
     CDS             1..154
                     /gene="LOC133067328"
                     /coded_by="XM_061158477.1:1..465"
                     /db_xref="GeneID:133067328"
ORIGIN      
        1 malkslvvlp llvlvlllvw aqpslgkesa aakferqhmd sgnspssssn ycnlmmfcrk
       61 mtqgkcrlvn tfvheslanv kavcsqkkva ckngqsscyq snsamhitec rntgsskypn
      121 caykttraek riivacegkp yvpvhfgasv yiat
//
LOCUS       XP_061014461             158 aa            linear   MAM 02-DEC-2023
DEFINITION  non-secretory ribonuclease [Dama dama].
ACCESSION   XP_061014461
VERSION     XP_061014461.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158478.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..158
                     /product="non-secretory ribonuclease"
                     /calculated_mol_wt=17995
     Region          33..155
                     /region_name="RnaseA"
                     /note="Pancreatic ribonuclease; pfam00074"
                     /db_xref="CDD:459661"
     Site            order(38..45,49,53,55..57,65,68..73,107,127,151)
                     /site_type="active"
                     /note="dimerization with domain swap [active]"
                     /db_xref="CDD:119387"
     Site            order(42,65,69,96,108,153..154)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:119387"
     Site            order(66,99,110,126,128,130..131,133)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:119387"
     CDS             1..158
                     /gene="RNASE2"
                     /coded_by="XM_061158478.1:376..852"
                     /db_xref="GeneID:133067329"
ORIGIN      
        1 mvpiqqdsrl clilllgllg mvislhaqpd tltwaqwfei qhinmaypqc naamqvvnry
       61 rmvckdrntf lhktfayvag icntpnvtcs qlgkmnchns svqvpitycn lirnamnytn
      121 cryqqtstqk ifiiacenrs srdsprypvv pvhldkii
//
LOCUS       XP_061014462             307 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc transporter ZIP2 [Dama dama].
ACCESSION   XP_061014462
VERSION     XP_061014462.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158479.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..307
                     /product="zinc transporter ZIP2"
                     /calculated_mol_wt=32340
     Region          5..304
                     /region_name="Zip"
                     /note="ZIP Zinc transporter; pfam02535"
                     /db_xref="CDD:396884"
     CDS             1..307
                     /gene="SLC39A2"
                     /coded_by="XM_061158479.1:142..1065"
                     /db_xref="GeneID:133067330"
ORIGIN      
        1 mepllgakig clfallvltl vcglipicfk wfqtatatgc hrrvlsflgc tsagvflgag
       61 fmhmtaeale gikseiqnlv iqnrtksegh sddgadsaym dypygelvis lgfflvffle
      121 slalqcclga aetpevqelg tahelephsh gflpspsrgp fralilllsl sfhsvfegla
      181 vglqltvast vqlclavlah kgivvfgvgl rlvqvgtesr wamlsilsla lmsplglavg
      241 lavpqgdska gqglaqavle gmaagtflyv tfleilprel aspeaplakw scvaagfafm
      301 avialwa
//
LOCUS       XP_061014463             156 aa            linear   MAM 02-DEC-2023
DEFINITION  ribonuclease 7-like [Dama dama].
ACCESSION   XP_061014463
VERSION     XP_061014463.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158480.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..156
                     /product="ribonuclease 7-like"
                     /calculated_mol_wt=17423
     Region          34..153
                     /region_name="RnaseA"
                     /note="Pancreatic ribonuclease; pfam00074"
                     /db_xref="CDD:459661"
     Site            order(39..48,54,56..58,66,69..74,107,125,149)
                     /site_type="active"
                     /note="dimerization with domain swap [active]"
                     /db_xref="CDD:119387"
     Site            order(43,66,70,96,108,151..152)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:119387"
     Site            order(67,99,110,124,126,128..129,131)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:119387"
     CDS             1..156
                     /gene="LOC133067331"
                     /coded_by="XM_061158480.1:124..594"
                     /db_xref="GeneID:133067331"
ORIGIN      
        1 mapartgfcp lllllllglw vaedpvsarp gnmtpaqwfe iqhvqprpqg cnaamrkink
       61 fskrckdlnt flhesfssva ttcqtpnkac knhkknchqs qkpvsltdck ltskrypdck
      121 ykekkrvasy ivacdppkkg dsgkfklvpv hlekvl
//
LOCUS       XP_061014464             311 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 5AU1 [Dama dama].
ACCESSION   XP_061014464
VERSION     XP_061014464.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158481.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..311
                     /product="olfactory receptor 5AU1"
                     /calculated_mol_wt=34718
     Region          12..298
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          27..51
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          60..82
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          98..120
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          143..159
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          196..219
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          238..260
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          269..294
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..311
                     /gene="LOC133067332"
                     /coded_by="XM_061158481.1:152..1087"
                     /db_xref="GeneID:133067332"
ORIGIN      
        1 meganlsrgt efellgltrd pwlqkllfvv flgmyaitll gnlvmfllih vsatlhtpmy
       61 sllkslsfld fcysstvvpq tlvnflakrk vitylgcmvq mffyagfats ecyliaamay
      121 dryaavcnpl lypiamsptv caslivgsyg agflnsliht scifslkfcg thvvthffcd
      181 gppilslscv dtslceillf ifagfnllsc tltilvsyll ilitilrmns argrfkafst
      241 cashftavcl fygttlfmyl rprssyslaq drtvaviytv vipllnpliy slrnkdvkea
      301 lrkvwerkim e
//
LOCUS       XP_061014465             313 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 10G3 [Dama dama].
ACCESSION   XP_061014465
VERSION     XP_061014465.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158482.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..313
                     /product="olfactory receptor 10G3"
                     /calculated_mol_wt=34724
     Region          27..300
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          27..51
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          61..83
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          99..121
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          144..160
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          197..220
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          239..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          268..293
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..313
                     /gene="LOC133067334"
                     /coded_by="XM_061158482.1:1..942"
                     /db_xref="GeneID:133067334"
ORIGIN      
        1 merinstllt efiltgipyp pqlrtflfgf flliyiltql gnllilitvc vdpqlharpm
       61 yiflgvlsii dmgissiivp rlmmnftlgl kpipfggcva qlyfyhflgs tqcfvytlma
      121 ydrylaicrp lrypvlmnak lstllvagaw vagsmhgalq ailtfrlpyc gpnqvdyffc
      181 dipavlrlac adttvnelvt fvdigvvvas cfslillsyi qilqailrir tadgrrqafs
      241 tcgahvtmvt vyyvpcafiy lrpetnspld gaaalfptai tpflnpliyt lrnqevklal
      301 krmigspgtk sev
//
LOCUS       XP_061014466             313 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4E2 [Dama dama].
ACCESSION   XP_061014466
VERSION     XP_061014466.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158483.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..313
                     /product="olfactory receptor 4E2"
                     /calculated_mol_wt=35418
     Region          25..291
                     /region_name="7tmA_OR4E-like"
                     /note="olfactory receptor 4E and related proteins, member
                     of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15940"
                     /db_xref="CDD:320606"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320606"
     Region          59..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320606"
     Site            order(81,84..85,97..102,104..105,108,153,155..159,195,
                     198..200,202..204,206..207,251,254..255,257..258,261,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320606"
     Region          97..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320606"
     Region          140..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320606"
     Region          195..225
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320606"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320606"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320606"
     CDS             1..313
                     /gene="LOC133067336"
                     /coded_by="XM_061158483.1:1..942"
                     /db_xref="GeneID:133067336"
ORIGIN      
        1 mdalnqtrvt qfvflgltdn wvleilffma fsvmyvltll gnilimvtiv ftprlhipmy
       61 fflsnlsfid ichssvtvpk mleglllerk tisfdnciaq lfflhlfaca eiflltvmay
      121 dryvaictpl hyanvmdmrv cvqlvfglwl ggtvhslvqt fltirlpycg pnvidsyfcd
      181 vppviklact dtyltgmliv snsgtislfc flalvtsytv ilvslrkqsa egrrkalstc
      241 sahfmvvaff fgpciflyth pdtnfssdkv vsvfytmvtp vlnpliytlr neevksamkh
      301 lrqrqvfsmk sct
//
LOCUS       XP_061014467             315 aa            linear   MAM 02-DEC-2023
DEFINITION  olfactory receptor 4E1 [Dama dama].
ACCESSION   XP_061014467
VERSION     XP_061014467.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158484.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..315
                     /product="olfactory receptor 4E1"
                     /calculated_mol_wt=35513
     Region          29..295
                     /region_name="7tmA_OR4E-like"
                     /note="olfactory receptor 4E and related proteins, member
                     of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15940"
                     /db_xref="CDD:320606"
     Region          30..56
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320606"
     Region          63..89
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320606"
     Site            order(85,88..89,101..106,108..109,112,157,159..163,199,
                     202..204,206..208,210..211,255,258..259,261..262,265,
                     269..270,272..274,277,280..281)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320606"
     Region          101..131
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320606"
     Region          144..165
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320606"
     Region          199..229
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320606"
     Region          235..265
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320606"
     Region          270..295
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320606"
     CDS             1..315
                     /gene="LOC133067337"
                     /coded_by="XM_061158484.1:1..948"
                     /db_xref="GeneID:133067337"
ORIGIN      
        1 meepvllnqt tvvtyfrlrg lsinqnvqma afamflvfyv ltligniliv itiiynhhlh
       61 tpmyfflsnl scidvchptv tvpkmlmdtw seeklisfda cvtqmfflhl facteifllt
      121 vmaydryvai ckplqymtvm nwkvcvllav alwtggtihs ialtsltikl pycdpdeidn
      181 ffcdvpqvvk lactdthiie ilivsnsgli smvcfvvlvv syavilvslr kqisegrrka
      241 lstcaahltv vtlflghcif iysrpstslp edkvvsvfft avtpllnpii ytlrnedmkn
      301 alnklmgrve ergkk
//
LOCUS       XP_061014473             289 aa            linear   MAM 02-DEC-2023
DEFINITION  proteasome subunit beta type-11 [Dama dama].
ACCESSION   XP_061014473
VERSION     XP_061014473.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158490.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..289
                     /product="proteasome subunit beta type-11"
                     /calculated_mol_wt=31513
     Region          50..237
                     /region_name="proteasome_beta_type_5"
                     /note="proteasome beta type-5 subunit. The 20S proteasome,
                     multisubunit proteolytic complex, is the central enzyme of
                     nonlysosomal protein degradation in both the cytosol and
                     nucleus. It is composed of 28 subunits arranged as four
                     homoheptameric rings that...; cd03761"
                     /db_xref="CDD:239730"
     Site            order(50,66,68,82,179,216,219..220)
                     /site_type="active"
                     /db_xref="CDD:239730"
     Site            order(68,71,73..78,98,100,115,127,130..131,133..134,137,
                     140,164,166,168..171,174,182..183,185..186,189..191,207,
                     214..217,220..221)
                     /site_type="other"
                     /note="beta subunit interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239730"
     CDS             1..289
                     /gene="PSMB11"
                     /coded_by="XM_061158490.1:1..870"
                     /db_xref="GeneID:133067405"
ORIGIN      
        1 malqdvckwq apdtqeisph lpqaggwavp rgwdpqaflq thgprlahgt ttlafrfrhg
       61 viaaadtrss cgnyvacpas rkvipvhqhl lgttsgtsad cvtwyrvlqr elrlralreg
      121 qlpsvagaak llsvmmsryr gldlcvatal cgwdrsgpal fyvysdgtcl qgdifsvgsg
      181 spyaygvldg gyrydmstqe ayalarrava hatrrdaysg gsvdlfhvre tgweyvschd
      241 awvlyselqk lpepekeqee eatpdragkg repsvglapg dlkvpterl
//
LOCUS       XP_061014474             281 aa            linear   MAM 02-DEC-2023
DEFINITION  CCAAT/enhancer-binding protein epsilon [Dama dama].
ACCESSION   XP_061014474
VERSION     XP_061014474.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158491.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..281
                     /product="CCAAT/enhancer-binding protein epsilon"
                     /calculated_mol_wt=30480
     Region          202..262
                     /region_name="bZIP_CEBPE"
                     /note="Basic leucine zipper (bZIP) domain of
                     CCAAT/enhancer-binding protein epsilon (CEBPE): a
                     DNA-binding and dimerization domain; cd14715"
                     /db_xref="CDD:269863"
     Region          204..262
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269863"
     Site            order(207..208,210..211,213..215,217..222,224,228)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269863"
     Site            order(229,232,235..236,239..240,242..243,245..247,
                     249..250,253..254,256..257,260..261)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269863"
     CDS             1..281
                     /gene="CEBPE"
                     /coded_by="XM_061158491.1:488..1333"
                     /db_xref="GeneID:133067406"
ORIGIN      
        1 mshgtyyece prtgqqplef sgaragpgel gdmceheasi dlsayiesge eqllsdlfav
       61 kpapearglk gpgtpafphy lpadprpfty pphtfgpdrk algpgiyssp gsydpravav
      121 keeprgpegs rgasrsgynp lqyqvahcgq tamhlppala apsqplrvlk aplaaaappc
      181 spllkapspa gpshkgkkav nkdsleyrlr rernniavrk srdkakrril etqqkvleym
      241 tendrlrsrv eqltqeldtl rnlfrqipea anlikgvggc s
//
LOCUS       XP_061014475             156 aa            linear   MAM 02-DEC-2023
DEFINITION  CKLF-like MARVEL transmembrane domain-containing protein 5 [Dama
            dama].
ACCESSION   XP_061014475
VERSION     XP_061014475.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158492.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..156
                     /product="CKLF-like MARVEL transmembrane domain-containing
                     protein 5"
                     /calculated_mol_wt=17286
     Region          29..139
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     CDS             1..156
                     /gene="CMTM5"
                     /coded_by="XM_061158492.1:158..628"
                     /db_xref="GeneID:133067407"
ORIGIN      
        1 mfnawsrrdr ppeagtaagl egfavdktfl sslkgillet elaltfiifi cftasisaym
       61 aaalleffit laflflyatq yyqrfdrlnw pcldflrcvs aiiiflvvsf aavtsrdgaa
      121 iaafvfgiil vsvfaydafk iyrtelvpra aqgdqq
//
LOCUS       XP_061014476            1939 aa            linear   MAM 02-DEC-2023
DEFINITION  myosin-6 [Dama dama].
ACCESSION   XP_061014476
VERSION     XP_061014476.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158493.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1939
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1939
                     /product="myosin-6"
                     /calculated_mol_wt=223723
     Region          31..1434
                     /region_name="COG5022"
                     /note="Myosin heavy chain [General function prediction
                     only]"
                     /db_xref="CDD:227355"
     Region          99..768
                     /region_name="MYSc_class_II"
                     /note="class II myosins, motor domain; cd01377"
                     /db_xref="CDD:276951"
     Site            order(126..134,178..185,234..244,462..467)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276951"
     Site            126..134
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276951"
     Site            178..185
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276951"
     Site            234..244
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276951"
     Site            462..467
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276951"
     Site            491..514
                     /site_type="other"
                     /note="relay loop"
                     /db_xref="CDD:276951"
     Site            699..708
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276951"
     Site            order(711..727,757..768)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276951"
     Region          1175..1932
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1939
                     /gene="MYH6"
                     /coded_by="XM_061158493.1:4..5823"
                     /db_xref="GeneID:133067408"
ORIGIN      
        1 mtdaqmadfg aaaqylrkse rerleaqtrp fdirtecfvp ddkeefvkak ilsreggkvt
       61 aetesgktvt vkedevlqqn ppkfdkiedm amltflhepa vlfnlkerya awmiytysgl
      121 fcvtvnpykw lpvynaevva ayrgkkrsea pphifsisdn ayqymltdre nqsilitges
      181 gagktvntkr viqyfasiaa igdrgkkdnv nankgtledq iiqanpalea fgnaktvrnd
      241 nssrfgkfir ihfgatgkla sadietylle ksrvifqlka ernyhifyqi lsnkkpelld
      301 mllvtnnpyd yafvsqgevs vasiddseel matdnafdvl gftseekagv ykltgaimhy
      361 gnmkfkqkqr eeqaepdgte dadksaylmg lnsadllkgl chprvkvgne yvtkgqnvqq
      421 vyysigalak avyekmfnwm vtrinatlet kqprqyfigv ldiagfeifd fnsfeqlcin
      481 ftneklqqff nhhmfvleqe eykkegiewe fidfgmdlqa cidliekpmg imsileeecm
      541 fpkatdmtfk aklydnhlgk snnfqkprni kgkpeahfsl ihyagtvdyn iigwleknkd
      601 plnetvvaly qksslklmat lfssyasadv gdsskskggk kkgssfqtvs alhrenlnkl
      661 mtnlrtthph fvrciipner kapgvmdnpl vmhqlrcngv legiricrkg fpnrilygdf
      721 rqryrilnpa aipegqfids rkgtekllgs ldidhnqykf ghtkvffkag llglleemrd
      781 erlsriitri qaqargqlmr iefkkilerr dallviqwni rafmgvknwp wmklyfkikp
      841 llksaeteke matmkeefgr iketleksea rrkeleekmv sllqekndlq lqvqaeqdnl
      901 ndaeercdql iknkiqleak vkemterled eeemnaelta kkrkledecs elkkdiddle
      961 ltlakvekek hatenkvknl teemagldei iakltkekka lqeahqqald dlqaeedkvn
     1021 tltkskvkle qqvddlegsl eqekkvrmdl erakrklegd lkltqesimd ldndklqlee
     1081 klkkkefdin qlnskiedeq alalqlqkkl kenqarieel eeeleaerta rakveklrsd
     1141 lsreleeise rleeaggats vqiemnkkre aefqkmrrdl eeatlqheam aaalrkkhad
     1201 svaelgeqid nlqrvkqkle keksefklel ddvtsnmeqi ikakanlekm srtledqane
     1261 yrakleeaqr slndfstqra klqtengels rqleekeali sqltrgklsy tqqledlkrq
     1321 leeegkakna lahalqsarh dcdllreqye eeteakaelq rvlskansev aqwrtkyetd
     1381 aiqrteelee akkklaqrlq daeeaveavn akcsslektk hrlqneiedl mvdversnaa
     1441 aaaldkkqrn fdkilaewkq kyeesqsele ssqkearsls telfklknay eeslehletf
     1501 krenknlqee isdlteqlge ggknmhelek vrkqlevekl elqsaleeae asleheegki
     1561 lraqlefnqi kaeierklve kdeemeqakr nhlrvvdslq tsldaetrsr nealrvkkkm
     1621 egdlnemeiq lsqanrtase aqkhlkvaqa hlkdtqiqld davranddlk eniaiverrn
     1681 nllqaeleel ramveqters rklaeqelie tservqllhs qntslinqkk kmesdlthlq
     1741 seveeavqec rnaeekakka itdaammaee lkkeqdtsah lermkknmeq tikdlqhrld
     1801 eaeqialkgg kkqlqklear vrelenelea eqkrnvesvk gmrkserrik eltyqteedr
     1861 knllrlqdlv dklqlkvkay krqaeeaeeq antnlskfrk vqheldeaee radiaesqvn
     1921 klraksrdig akqkmhdee
//
LOCUS       XP_061014477            1935 aa            linear   MAM 02-DEC-2023
DEFINITION  myosin-7 [Dama dama].
ACCESSION   XP_061014477
VERSION     XP_061014477.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158494.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1935
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1935
                     /product="myosin-7"
                     /calculated_mol_wt=223118
     Region          37..1432
                     /region_name="COG5022"
                     /note="Myosin heavy chain [General function prediction
                     only]"
                     /db_xref="CDD:227355"
     Region          99..766
                     /region_name="MYSc_class_II"
                     /note="class II myosins, motor domain; cd01377"
                     /db_xref="CDD:276951"
     Site            order(126..134,178..185,233..243,461..466)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276951"
     Site            126..134
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276951"
     Site            178..185
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276951"
     Site            233..243
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276951"
     Site            461..466
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276951"
     Site            490..513
                     /site_type="other"
                     /note="relay loop"
                     /db_xref="CDD:276951"
     Site            697..706
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276951"
     Site            order(709..725,755..766)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276951"
     Region          1173..1930
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1935
                     /gene="MYH7"
                     /coded_by="XM_061158494.1:1..5808"
                     /db_xref="GeneID:133067410"
ORIGIN      
        1 mvdaemaafg eaapylrkse kerleaqtrp fdlkkdvfvp ddkeefvkat ilsreggkvt
       61 aetehgktvt vkedqvlqqn ppkfdkiedm amltflhepa vlynlkerya swmiytysgl
      121 fcvtinpykw lpvynaevva ayrgkkrsea pphifsisdn ayqymltdre nqsilitges
      181 gagktvntkr viqyfaviaa igdrskkeqt pgkgtledqi iqanpaleaf gnaktvrndn
      241 ssrfgkfiri hfgatgklas adietyllek srvifqlkae rdyhifyqil snkkpelldm
      301 llitnnpydy afisqgettv asiddaeelm atdnafdvlg ftteeknsmy kltgaimhfg
      361 nmkfkqkqre eqaepdgtee adksaylmgl nsadllkglc hprvkvgney vtkgqnvqqv
      421 ayatgalaka vyermfnwmv trinatletk qprqyfigvl diagfeifdf nsfeqlcinf
      481 tneklqqffn hhmfvleqee ykkegiewef idfgmdlqac idliekpmgi msileeecmf
      541 pkatdmtfka klydnhlgks nnfqkprnik gkpeahfsli hyagtvdyni igwlqknkdp
      601 lnetvvdlyk ksslkmlsnl fanyagfdtp iekgkgkakk gssfqtvsal hrenlnklmt
      661 nlrsthphfv rciipnetks pgvidnplvm hqlrcngvle giricrkgfp nrilygdfrq
      721 ryrilnpaai pegqfidsrk gaekllgsld idhnqykfgh tkvffkagll glleemrder
      781 lsriitriqa qsrgvlsrme fkkllerrds lliiqwnira fmavknwpwm rlffkikpll
      841 ksaetekeia tmkeefgrlk ealeksearr keleekmvsl lqekndlqlq vqaeqdnlad
      901 aeercdqlik nkiqleakvk emterledee emnaeltakk rkledecsel krdiddlelt
      961 lakvekekha tenkvknlte emagldeiia kltkekkalq eahqqalddl qaeedkvntl
     1021 tkakvkleqh vddlegsleq ekkvrmdler akrklegdlk ltqesimdle ndkqqlderl
     1081 kkkdfelnal nariedeqal gsqlqkklke lqarieelee eleaertara kveklrsdls
     1141 releeiserl eeaggatsvq iemnkkreae fqkmrrdlee atlqheataa alrkkhadsv
     1201 aelgeqidnl qrvkqkleke ksefkleldd vtsnmeqiik akanlekmcr tledqmnehr
     1261 skaeetqrsv ndltsqrakl qtengelsrq ldekealisq ltrgkltytq qledlkrqle
     1321 eevkaknala halqsarhdc dllreqyeee teakaelqrv lskansevaq wrtkyetdai
     1381 qrteeleeak kklaqrlqda eeaveavnak csslektkhr lqneiedlmv dversnaaaa
     1441 aldkkqrnfd kilaewkqky eesqseless qkearslste lfklknayee slehletfkr
     1501 enknlqeeis dlteqlgssg ktihelekvr kqleaeklel qsaleeaeas leheegkilr
     1561 aqlefnqika emerklaekd eemeqakrnh lrvvdslqts ldaetrsrne alrvkkkmeg
     1621 dlnemeiqls hanrlaaeaq kqvkslqsll kdtqiqldda vranddlken iaiverrnnl
     1681 lqaeleelra vveqtersrk laeqeliets ervqllhsqn tslinqkkkm eadlsqlqte
     1741 veeavqecrn aeekakkait daammaeelk keqdtsahle rmkknmeqti kdlqhrldea
     1801 eqialkggkk qlqklearvr eleneleaeq krnaesvkgm rkserrikel tyqteedrkn
     1861 llrlqdlvdk lqlkvkaykr qaeeaeeqan tnlskfrkvq heldeaeera diaesqvnkl
     1921 raksrdigak glnee
//
LOCUS       XP_061014478             628 aa            linear   MAM 02-DEC-2023
DEFINITION  junctophilin-4 isoform X1 [Dama dama].
ACCESSION   XP_061014478
VERSION     XP_061014478.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158495.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..628
                     /product="junctophilin-4 isoform X1"
                     /calculated_mol_wt=66026
     Region          <4..143
                     /region_name="COG4642"
                     /note="Uncharacterized conserved protein [Function
                     unknown]"
                     /db_xref="CDD:443680"
     Region          <281..>336
                     /region_name="COG4642"
                     /note="Uncharacterized conserved protein [Function
                     unknown]"
                     /db_xref="CDD:443680"
     CDS             1..628
                     /gene="JPH4"
                     /coded_by="XM_061158495.1:39..1925"
                     /db_xref="GeneID:133067411"
ORIGIN      
        1 mspggkfdfd dggcyvggwe agrahgygvc tgpgaqgeys gcwahgfesl gvftgpgghs
       61 yqghwqqgkr eglgverksr wtyrgewlgg lkgrsgvwes vsglryaglw kdgfqdgygt
      121 etysdggtyq gqwqagkrhg ygvrqsvpyh qaallrsprr tsldsghsdp ptpppplplp
      181 gdeggspasg srggfvlagp gdgdgassrk rtpaaggffr rslllsglra ggrrsslgsk
      241 rgslrsevss evgstgppgs easgppapap paliegsate vyagewradr rsgygvsqrs
      301 nglryegewl gnrrhgygrt trpdgsreeg kykrnrlvhg grvrsllpla lrrgkvkekv
      361 dravegarra vsaarqrqei aaaraadall kavaassvae kaveaarmak liaqdlqpml
      421 eapgrrprqd segsdtepld edspgvyeng ltpsegspel psspasshqp wrpptcrspl
      481 psggdrgpfs spkawpeewg gpgeqaeela gyeaedeagm qgpeprdgsp llggcsdssg
      541 slreeegede epfpqlstpg gsepepaalp vlrglssrsp eagclveeae eataterpaq
      601 rgaanplvvg avalldlsla flfsqllt
//
LOCUS       XP_061014479             272 aa            linear   MAM 02-DEC-2023
DEFINITION  junctophilin-4 isoform X2 [Dama dama].
ACCESSION   XP_061014479
VERSION     XP_061014479.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158496.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..272
                     /product="junctophilin-4 isoform X2"
                     /calculated_mol_wt=28374
     Region          5..>143
                     /region_name="PLN03185"
                     /note="phosphatidylinositol phosphate kinase; Provisional"
                     /db_xref="CDD:215619"
     CDS             1..272
                     /gene="JPH4"
                     /coded_by="XM_061158496.1:85..903"
                     /db_xref="GeneID:133067411"
ORIGIN      
        1 mspggkfdfd dggcyvggwe agrahgygvc tgpgaqgeys gcwahgfesl gvftgpgghs
       61 yqghwqqgkr eglgverksr wtyrgewlgg lkgrsgvwes vsglryaglw kdgfqdgygt
      121 etysdggtyq gqwqagkrhg ygvrqsvpyh qaallrsprr tsldsghsdp ptpppplplp
      181 gdeggspasg srggfvlagp gdgdgassrk rtpaaggffr rslllsglra ggrrsslgsk
      241 rgslrsegsr rpsqgsgsqq rcregcggss ng
//
LOCUS       XP_061014480             272 aa            linear   MAM 02-DEC-2023
DEFINITION  junctophilin-4 isoform X2 [Dama dama].
ACCESSION   XP_061014480
VERSION     XP_061014480.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158497.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..272
                     /product="junctophilin-4 isoform X2"
                     /calculated_mol_wt=28374
     Region          5..>143
                     /region_name="PLN03185"
                     /note="phosphatidylinositol phosphate kinase; Provisional"
                     /db_xref="CDD:215619"
     CDS             1..272
                     /gene="JPH4"
                     /coded_by="XM_061158497.1:85..903"
                     /db_xref="GeneID:133067411"
ORIGIN      
        1 mspggkfdfd dggcyvggwe agrahgygvc tgpgaqgeys gcwahgfesl gvftgpgghs
       61 yqghwqqgkr eglgverksr wtyrgewlgg lkgrsgvwes vsglryaglw kdgfqdgygt
      121 etysdggtyq gqwqagkrhg ygvrqsvpyh qaallrsprr tsldsghsdp ptpppplplp
      181 gdeggspasg srggfvlagp gdgdgassrk rtpaaggffr rslllsglra ggrrsslgsk
      241 rgslrsegsr rpsqgsgsqq rcregcggss ng
//
LOCUS       XP_061014482              80 aa            linear   MAM 02-DEC-2023
DEFINITION  cytochrome c oxidase subunit 7B, mitochondrial-like [Dama dama].
ACCESSION   XP_061014482
VERSION     XP_061014482.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158499.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..80
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..80
                     /product="cytochrome c oxidase subunit 7B,
                     mitochondrial-like"
                     /calculated_mol_wt=8881
     Region          1..79
                     /region_name="COX7B"
                     /note="Cytochrome C oxidase chain VIIB; pfam05392"
                     /db_xref="CDD:461637"
     Site            order(34..35,39,48..49,53,63,68,70,72,74..77)
                     /site_type="other"
                     /note="Subunit IV/VIIb interface [polypeptide binding]"
                     /db_xref="CDD:238696"
     Site            64..65
                     /site_type="other"
                     /note="Subunit I/VIIb interfae [polypeptide binding]"
                     /db_xref="CDD:238696"
     Site            77
                     /site_type="other"
                     /note="Subunit VIc/VIIb interface [polypeptide binding]"
                     /db_xref="CDD:238696"
     CDS             1..80
                     /gene="LOC133067412"
                     /coded_by="XM_061158499.1:67..309"
                     /db_xref="GeneID:133067412"
ORIGIN      
        1 mfplaknals hlrvqtiqqa varqihqkra pdfhdkygna vlasgatvcv avwvymatqi
       61 giewnpspvg rvtpkewreq
//
LOCUS       XP_061014483             184 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein uL22-like [Dama dama].
ACCESSION   XP_061014483
VERSION     XP_061014483.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158500.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..184
                     /product="large ribosomal subunit protein uL22-like"
                     /calculated_mol_wt=21270
     Region          1..165
                     /region_name="PTZ00178"
                     /note="60S ribosomal protein L17; Provisional"
                     /db_xref="CDD:240306"
     Site            order(15..16,38..40,42..43,45..46,99..104,112..117,
                     149..150)
                     /site_type="active"
                     /note="putative translocon binding site [active]"
                     /db_xref="CDD:238205"
     Site            order(18,20,23,25..27,30,34,37,97,101,104,116,118..120,
                     122,125,137..142)
                     /site_type="other"
                     /note="protein-rRNA interface [nucleotide binding]"
                     /db_xref="CDD:238205"
     CDS             1..184
                     /gene="LOC133067414"
                     /coded_by="XM_061158500.1:60..614"
                     /db_xref="GeneID:133067414"
ORIGIN      
        1 mvhysldpen ptkscksrgs nlrvhfkntr etaqaikgmh iqkatkylkd vtlkkqcvpf
       61 crynggvgry aqakkwgwsq grwpkksaef llhmfknaes naelkgldvd slviehiqvn
      121 kapkmrrrty rahgrikpym sspchiemil tekeqivpkp eeevaqkkki pqkklkkqkl
      181 mare
//
LOCUS       XP_061014484             557 aa            linear   MAM 02-DEC-2023
DEFINITION  copine-6 [Dama dama].
ACCESSION   XP_061014484
VERSION     XP_061014484.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158501.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..557
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..557
                     /product="copine-6"
                     /calculated_mol_wt=61809
     Region          20..137
                     /region_name="C2A_Copine"
                     /note="C2 domain first repeat in Copine; cd04048"
                     /db_xref="CDD:176013"
     Site            order(35,41,93,95,105)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176013"
     Region          152..266
                     /region_name="C2B_Copine"
                     /note="C2 domain second repeat in Copine; cd04047"
                     /db_xref="CDD:176012"
     Site            order(167,173,229,231,237)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176012"
     Region          325..538
                     /region_name="Copine"
                     /note="pfam07002"
                     /db_xref="CDD:462064"
     CDS             1..557
                     /gene="CPNE6"
                     /coded_by="XM_061158501.1:360..2033"
                     /db_xref="GeneID:133067415"
ORIGIN      
        1 msdpemawvp epptmtlgas rvelrvschg lldrdtltkp hpcvllklhs deqwvevert
       61 evlrscsspv fsrvlaleyf feekqplqfh vfdaedgsts prndtflgst ectlgqivsq
      121 tkvtkplllk ngknagksti tivaeevsgt ndyvqltfra hkldnkdlfs ksdpfmeiyk
      181 tngdqsdqlv wrtevvknnl npswepfrls lhslcscdih rplkflvydy dssgkhdfig
      241 efsstfqemq egtanpgqem qwdcinpkyr dkkknykssg tvvlaqctve kvhtfldyim
      301 ggcqisftva idftasngdp rssqslhcls prqpnhylqa lravggicqd ydsdkrfpaf
      361 gfgarippnf evshdfainf dpenpeceei sgviasyrrc lpqiqlygpt nvapiinrva
      421 epaqreqstg qatkysvllv ltdgvvsdma etrtaivras rlpmsiiivg vgnadfsdmr
      481 lldgddgtlr cprgvpaard ivqfvpfrdf kdaspsalak cvlaevprqv veyyasqgis
      541 pgpprpctpa ttpspsp
//
LOCUS       XP_061014485              58 aa            linear   MAM 02-DEC-2023
DEFINITION  ATP synthase membrane subunit K, mitochondrial-like [Dama dama].
ACCESSION   XP_061014485
VERSION     XP_061014485.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158502.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..58
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..58
                     /product="ATP synthase membrane subunit K,
                     mitochondrial-like"
                     /calculated_mol_wt=6335
     Region          1..51
                     /region_name="ATP_synth_reg"
                     /note="ATP synthase regulation; pfam14960"
                     /db_xref="CDD:434349"
     CDS             1..58
                     /gene="LOC133067416"
                     /coded_by="XM_061158502.1:602..778"
                     /db_xref="GeneID:133067416"
ORIGIN      
        1 magpeadaqf hftdikkyfn sytltgrmnc vlatygsial ivsyfklrsk ktpavkat
//
LOCUS       XP_061014486             300 aa            linear   MAM 02-DEC-2023
DEFINITION  TBC1 domain family member 21 [Dama dama].
ACCESSION   XP_061014486
VERSION     XP_061014486.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158503.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..300
                     /product="TBC1 domain family member 21"
                     /calculated_mol_wt=34805
     Region          24..251
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     CDS             1..300
                     /gene="TBC1D21"
                     /coded_by="XM_061158503.1:1..903"
                     /db_xref="GeneID:133067417"
ORIGIN      
        1 mttlspensl sarqsasfil glhptvrtea wkfltgyysw qssqderltv dstrrknyea
       61 lcqmyqkiqp llenlhrnfi etrnnitydi kklydkdplg nvlidkkrle killlsyvcn
      121 tqaeyqqgfh emvmifqlmv ehdhetfwlf qfflqktehs cvinigvgkn ldmlntlinf
      181 ldpvfaehlk gkgagavpsl fpwfclcfqr afktfddvwr lwevlltgkp crnfqvlvay
      241 smlqmvrqqv lqesmtgddi llacnnlidl dadelisaac ivyaeliqkd vpqslkdffl
//
LOCUS       XP_061014487             292 aa            linear   MAM 02-DEC-2023
DEFINITION  inhibitory synaptic factor 1 [Dama dama].
ACCESSION   XP_061014487
VERSION     XP_061014487.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158504.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..292
                     /product="inhibitory synaptic factor 1"
                     /calculated_mol_wt=31614
     Region          52..279
                     /region_name="DUF4589"
                     /note="Domain of unknown function (DUF4589); pfam15252"
                     /db_xref="CDD:464592"
     CDS             1..292
                     /gene="INSYN1"
                     /coded_by="XM_061158504.1:1307..2185"
                     /db_xref="GeneID:133067418"
ORIGIN      
        1 mnirgtpdlg qpsddpssgg ererirqrmk mvigqledil relkevakel revvsqidkl
       61 tsdfdfelep ddwttatvss tsssdkagvg gpfdlghldf mtadilsdsw efcsfldist
      121 psdsvdgpes tqpgagpdyr lmngglpipn gprvetpdss seeafsagpv kgqlpqrtpg
      181 trervrfsdk vlyhalccdd eegdaeeeaa eeevglspep phteapagpl kpspapykpr
      241 rspltgrrsg ptsvpeqtrr vtrnsstqtv sdkstqtvlp ytatrqkakg kn
//
LOCUS       XP_061014488             292 aa            linear   MAM 02-DEC-2023
DEFINITION  inhibitory synaptic factor 1 [Dama dama].
ACCESSION   XP_061014488
VERSION     XP_061014488.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158505.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..292
                     /product="inhibitory synaptic factor 1"
                     /calculated_mol_wt=31614
     Region          52..279
                     /region_name="DUF4589"
                     /note="Domain of unknown function (DUF4589); pfam15252"
                     /db_xref="CDD:464592"
     CDS             1..292
                     /gene="INSYN1"
                     /coded_by="XM_061158505.1:1288..2166"
                     /db_xref="GeneID:133067418"
ORIGIN      
        1 mnirgtpdlg qpsddpssgg ererirqrmk mvigqledil relkevakel revvsqidkl
       61 tsdfdfelep ddwttatvss tsssdkagvg gpfdlghldf mtadilsdsw efcsfldist
      121 psdsvdgpes tqpgagpdyr lmngglpipn gprvetpdss seeafsagpv kgqlpqrtpg
      181 trervrfsdk vlyhalccdd eegdaeeeaa eeevglspep phteapagpl kpspapykpr
      241 rspltgrrsg ptsvpeqtrr vtrnsstqtv sdkstqtvlp ytatrqkakg kn
//
LOCUS       XP_061014489            1200 aa            linear   MAM 02-DEC-2023
DEFINITION  potassium/sodium hyperpolarization-activated cyclic
            nucleotide-gated channel 4 [Dama dama].
ACCESSION   XP_061014489
VERSION     XP_061014489.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158506.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1200
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1200
                     /product="potassium/sodium hyperpolarization-activated
                     cyclic nucleotide-gated channel 4"
                     /calculated_mol_wt=128380
     Region          219..261
                     /region_name="Ion_trans_N"
                     /note="Ion transport protein N-terminal; pfam08412"
                     /db_xref="CDD:400630"
     Region          254..>741
                     /region_name="PLN03192"
                     /note="Voltage-dependent potassium channel; Provisional"
                     /db_xref="CDD:215625"
     Region          596..704
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(660..661,670..672)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(692..694,698..700)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     CDS             1..1200
                     /gene="HCN4"
                     /coded_by="XM_061158506.1:1..3603"
                     /db_xref="GeneID:133067422"
ORIGIN      
        1 mdklppsmrk rlyslpqqvg akawimdeee daeeegaggr qdpsrrsirl rplpspspsa
       61 aaggteprga ahgaadgegs argagksstn gdcrrfrgsl aslgsrgggg agagggsshg
      121 hlhdsveerr liaegdaspg edrtppglaa epersgasaq paaspppppq qppqpvpasc
      181 eqpsvdtaik veggaaagdq ilpeaevrlg qagfmqrqfg amlqpgvnkf slrmfgsqka
      241 vereqervks agfwiihpys dfrfywdltm lllmvgnlii ipvgitffkd enttpwivfn
      301 vvsdtfflid lvlnfrtgiv vednteiild pqrikmkylk swfvvdfiss ipvdyifliv
      361 etridsevyk taralrivrf tkilsllrll rlsrliryih qweeifhmty dlasavvriv
      421 nligmmlllc hwdgclqflv pmlqdfpddc wvsinnmvnn swgkqysyal fkamshmlci
      481 gygrqapvgm sdvwltmlsm ivgatcyamf ighataliqs ldssrrqyqe kykqveqyms
      541 fhklppdtrq rihdyyehry qgkmfdeesi lgelseplre eiinfncrkl vasmplfana
      601 dpnfvtsmlt klrfevfqpg dyiiregtig kkmyfiqhgv vsvltkgnke tkladgsyfg
      661 eiclltrgrr tasvradtyc rlyslsvdnf nevleeypmm rrafetvald rldrigkkns
      721 illhkvqhdl nsgvfnyqen eiiqqivqhd remahcahrv qaaasatptp tpviwtpliq
      781 aplqaaaatt svaialthhp rlpaaifrpp pgpglgglga gqtprhlkrl qslipsalgs
      841 aspasspsqv dtpssssfhi qqlagfsapa glspllpsss sspppgvggs spaptpstaa
      901 aaatagfghf hkalggslss sdsplltplq pgarspqasq pppplpgarg glglaepflp
      961 pppsarspss spgqlgqppg elspglaagp pgtpetpprq perlslaaga sggaspvaft
     1021 prggpsppgh spgpprtfps apprasgshg slllppassp pppqvpqrrg tppltpgrlt
     1081 qdlklisasq palpqdgaqt lrrasphssg esvaafplfp rggggsggsg glglpgrpyg
     1141 avpgqhvtlp rktssgslpp plslfgarat ssggppltaa pqrepgarse pvrsklpsnl
//
LOCUS       XP_061014490             151 aa            linear   MAM 02-DEC-2023
DEFINITION  small ribosomal subunit protein uS15 [Dama dama].
ACCESSION   XP_061014490
VERSION     XP_061014490.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158507.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..151
                     /product="small ribosomal subunit protein uS15"
                     /calculated_mol_wt=17091
     Region          4..151
                     /region_name="PTZ00072"
                     /note="40S ribosomal protein S13; Provisional"
                     /db_xref="CDD:185427"
     CDS             1..151
                     /gene="LOC133067423"
                     /coded_by="XM_061158507.1:26..481"
                     /db_xref="GeneID:133067423"
ORIGIN      
        1 mgrmhapgkg lsqsalpyrr svptwlklts ddvkeqiykl akkgltpsqi gvilrdshgv
       61 aqvrfvtgnk ilrilkskgl apdlpedlyh likkavavrk hlernrkdkd akfrlilies
      121 rihrlaryyk tkrvlppnwk yesstasalv a
//
LOCUS       XP_061014491             411 aa            linear   MAM 02-DEC-2023
DEFINITION  photoreceptor-specific nuclear receptor [Dama dama].
ACCESSION   XP_061014491
VERSION     XP_061014491.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158508.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..411
                     /product="photoreceptor-specific nuclear receptor"
                     /calculated_mol_wt=44774
     Region          31..122
                     /region_name="NR_DBD_PNR"
                     /note="DNA-binding domain of the photoreceptor
                     cell-specific nuclear receptor (PNR) is composed of two
                     C4-type zinc fingers; cd06970"
                     /db_xref="CDD:143528"
     Site            order(39,42,56,59,75,82,92,95)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143528"
     Site            order(49..51,57..58,60,62,65,68,89..90,93,96,107,110)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143528"
     Region          193..398
                     /region_name="NR_LBD_Tlx_PNR_like"
                     /note="The ligand binding domain of Tailless-like
                     proteins, orphan nuclear receptors; cd06950"
                     /db_xref="CDD:132748"
     Site            order(220..221,225,259,263,266,280,301)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:132748"
     Site            order(230,233,237,242,247..248,250..251,254..255)
                     /site_type="active"
                     /note="putative coactivator recognition site [active]"
                     /db_xref="CDD:132748"
     CDS             1..411
                     /gene="NR2E3"
                     /coded_by="XM_061158508.1:44..1279"
                     /db_xref="GeneID:133067424"
ORIGIN      
        1 msanmaaavp aavstsrkes pgrwglgeep tgvgpslqcr vcgdsssgkh ygiyacngcs
       61 gffkrsvrrr liyrcqvgag mcpvdkahrn qcqacrlkkc lqagmnqdav qnerqprsta
      121 qvrmdsvese teprleplat ppalggpssr gptpvsaara lgpraltppg hhhfmaslik
      181 aetctklepe dadenidvtg ndpefpsspy sssspcalds ihetsarllf mavkwaknlp
      241 vfsnlpfrdq villeeawse lfllgaiqws lpldncplla lpeasaggss qgrlvlasae
      301 trilqetisr fralavdpte facmkalvlf kpetrglkdp ehvealqdqs qvmlsqhska
      361 hhpsqpvrfg klllllpslr fitservell ffrktigntp mekllcdmfk n
//
LOCUS       XP_061014492             994 aa            linear   MAM 02-DEC-2023
DEFINITION  IQ domain-containing protein H [Dama dama].
ACCESSION   XP_061014492
VERSION     XP_061014492.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158509.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..994
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..994
                     /product="IQ domain-containing protein H"
                     /calculated_mol_wt=113494
     CDS             1..994
                     /gene="IQCH"
                     /coded_by="XM_061158509.1:124..3108"
                     /db_xref="GeneID:133067437"
ORIGIN      
        1 maqekenedp vgsiliqvhe dlyelreklt kfpleekgga ldiqnletai krtemglkih
       61 iekylnvvhq hvlttpidyn lysshaskwl fpavidqktf ifplesegkl wqpqkehnsf
      121 prafprvkpa shlclwdfps knteevaisl sseilgrktg lnikiiqdpe sthhraavna
      181 tygislpyin qrkasvkaqk likgstissl tvlpashrtn pyftpvpvlq adankgvlsm
      241 ierglippta ritfqnppii praaplhrfd eghkslatap faapqrkesi peemktlslk
      301 rqrskwkgrk srgyhdkkav kvtapsktqk spwdydffiy ngvvdktapd flafkehysl
      361 swgsifslle hiekflkdya ipevkikgns lvtllpefel knkltrsdll svlenpvdiq
      421 mmlnlpgqry kgqdgkteaa mkiqatwkcy karrffqtyr rqkwasgvia iawllhchkt
      481 rlrkllkesr erhlenfrir akhlaanwnr irtsrrtiih ipslgysqpv rqniadfntq
      541 qntqlgrlcd ildakvsviy icshrmndel llyynkilsl qaavksgnle drsdlrdrfk
      601 iitpeainif tiieqvsqlv tdhleiqrwl fktdyefggn gtafcdipsh lkcykwilke
      661 sqrysrkdwr kkwaqepalv kiseelagil aqhaqpvngk rfptwrkflq tflsqggvie
      721 ayppsesvtn vtvdmliepn geirllstgd qfhaegpfis sgttmpqtsv dpqvlsslcl
      781 qigkackmkn vighfsidlv tfidpstmeq qvwatglnls ysdqlaltql tlyltnghld
      841 cslstlevpr fapkkdkkmn nlnvqkvpsq atsryavmst qlrhdtlslv fhyvflqmck
      901 ahgigynved rqgtifilfe nlkrdrlgml tigedlqgvl mtfarnlfii hqeisapnmq
      961 getnfktaid dleailgvte enklrfeenl qskh
//
LOCUS       XP_061014493             458 aa            linear   MAM 02-DEC-2023
DEFINITION  kelch repeat and BTB domain-containing protein 13 [Dama dama].
ACCESSION   XP_061014493
VERSION     XP_061014493.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158510.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..458
                     /product="kelch repeat and BTB domain-containing protein
                     13"
                     /calculated_mol_wt=49615
     Region          9..89
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          101..187
                     /region_name="BACK"
                     /note="BACK (BTB and C-terminal Kelch) domain; cl28903"
                     /db_xref="CDD:475122"
     Region          141..383
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          202..244
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          248..292
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          295..336
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          340..383
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..458
                     /gene="KBTBD13"
                     /coded_by="XM_061158510.1:1..1377"
                     /db_xref="GeneID:133067442"
ORIGIN      
        1 mpqgpetpvq vwvgsqlfqa drallvehcg ffsglfrsgm rearaaevhl galspdgfrt
       61 tlrvlrgerp alaaaeellq avecaaflqa palarflehs ltsencallc daaaafglhd
      121 vfhsaalfir dgahelaael alpeartyva alrpssyvav sthapapgfl edpsrtmcyl
      181 deeedtwrtl aalpleastl lagvatlgnk lyivggvrgp nkevvdlgfc ydpdggtwre
      241 fpsphqpryd talagfeghl yaiggefqrt amssverydp asgcwsfmad lpqpaagvpc
      301 ahargrlfvc lwqpadttav veytvradew lpvaelrrpq syghcmvahr dslyvvrngp
      361 kddflhcaid clnlatgqwt alpgqfvnsk galftavvrg dtvytvnrvf tllyaieggs
      421 wrllrekagf prpgslqtfl lrlppgargp vasttpel
//
LOCUS       XP_061014494             217 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein uL1-like [Dama dama].
ACCESSION   XP_061014494
VERSION     XP_061014494.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158511.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..217
                     /product="large ribosomal subunit protein uL1-like"
                     /calculated_mol_wt=24702
     Region          2..217
                     /region_name="Ribosomal_L1"
                     /note="Ribosomal protein L1. The L1 protein, located near
                     the E-site of the ribosome, forms part of the L1 stalk
                     along with 23S rRNA. In bacteria and archaea, L1 functions
                     both as a ribosomal protein that binds rRNA, and as a
                     translation repressor that binds...; cl00322"
                     /db_xref="CDD:469720"
     Site            order(26..28,31,33,35,37,162,164,166,210..211,213)
                     /site_type="other"
                     /note="mRNA/rRNA interface [nucleotide binding]"
                     /db_xref="CDD:238235"
     CDS             1..217
                     /gene="LOC133067445"
                     /coded_by="XM_061158511.1:28..681"
                     /db_xref="GeneID:133067445"
ORIGIN      
        1 msskvsrdtl yeavrevlhg nqrkrrkfle tvelqisvkn ydpqkdkrfs gtirlkstpr
       61 pkfsvcvlgd qqhcdeakav diphmdieal kklnknkklv kklakkydaf laseslikqi
      121 prilgpglnk askfpsllth nenmvakvde vkstikfqmk kvlclavaag hvkmtddelv
      181 ynihlavnfl vsllkknwqn vralyikstm gkpqrly
//
LOCUS       XP_061014495             407 aa            linear   MAM 02-DEC-2023
DEFINITION  betaine--homocysteine S-methyltransferase 1 [Dama dama].
ACCESSION   XP_061014495
VERSION     XP_061014495.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158512.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..407
                     /product="betaine--homocysteine S-methyltransferase 1"
                     /calculated_mol_wt=44810
     Region          23..314
                     /region_name="S-methyl_trans"
                     /note="Homocysteine S-methyltransferase; pfam02574"
                     /db_xref="CDD:460598"
     CDS             1..407
                     /gene="LOC133067446"
                     /coded_by="XM_061158512.1:1..1224"
                     /db_xref="GeneID:133067446"
ORIGIN      
        1 mapaggknak kgilerlnsg eviigdggfv falekrgyvk agpwtpeaav ehpeavrqlh
       61 reflragsnv mqtftfyase dklenrgnyv aekisgqkvn eaacdiarqv adegdalvag
      121 gvsqtpsyls cksetevkkv fqqqlevfmr knvdfliaey fehveeavwa vealkasgkp
      181 vaatlcigpe gdlhsvtpge cavrlvkaga sivgvnchfd ptislqtvkl mkegleaagl
      241 kahlmsqpla yhtpdcgkqg fidlpefpfg leprvatrwd iqkyareayn lgvryiggcc
      301 gfepyhirai aeelapergf lppasekhgs wgsgldmhtk pwirararke ywenlriasg
      361 rpynpsmskp dawgvtkgtv elmqqkeatt eqqlrelfek hkfksaq
//
LOCUS       XP_061014496             866 aa            linear   MAM 02-DEC-2023
DEFINITION  dimethylglycine dehydrogenase, mitochondrial [Dama dama].
ACCESSION   XP_061014496
VERSION     XP_061014496.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158513.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..866
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..866
                     /product="dimethylglycine dehydrogenase, mitochondrial"
                     /calculated_mol_wt=96518
     Region          49..431
                     /region_name="DadA"
                     /note="Glycine/D-amino acid oxidase (deaminating) [Amino
                     acid transport and metabolism]; COG0665"
                     /db_xref="CDD:440429"
     Region          417..472
                     /region_name="FAO_M"
                     /note="FAD dependent oxidoreductase central domain;
                     pfam16350"
                     /db_xref="CDD:465100"
     Region          488..857
                     /region_name="GcvT"
                     /note="Glycine cleavage system protein T
                     (aminomethyltransferase) [Amino acid transport and
                     metabolism]; COG0404"
                     /db_xref="CDD:440173"
     CDS             1..866
                     /gene="DMGDH"
                     /coded_by="XM_061158513.1:1..2601"
                     /db_xref="GeneID:133067447"
ORIGIN      
        1 mlrlgtrrlr glglrgfplr gspgrphsvc srrgeenppl saesrwkdqa etviigggcv
       61 gvslayhlak agmkdvvlle kseltagstw haaglttyfh pginlkkihy ysiklyekle
      121 eetgqvvgfh qpgsiriatt pvrvdefkyq mtrtgwhate qyiiepekiq emfpllnmnk
      181 ilaglynpgd ghidpysltm alaagarkyg alliypapvt slkprsdgtw dvetphgsmr
      241 anrivnaagf warevgkmig lehplipvqh qyiitstipe vkalkrelpv lrdlegsfyl
      301 rqerdgllfg pyesqekmkv qdswvasgvp pgfgkelfes dldrimehve aamdlvpvlk
      361 kadiinivng pityspdilp mvgphqgvrn ywvavgfgyg iihaggvgky lsdwilhgep
      421 pfdlieldpn rygkwtttey teakaresyg fnnivgypke erfagrptqr vsglyktles
      481 kcsmgfhagw eqphwfykpg qdpgyrpsfh rtnwfepvgs eyqqvmqrvg vidlspfgkf
      541 nikgqdsirl ldhlfanvip kvgftnishm ltpkgrvyae ltvshqspge fllvtgsgse
      601 lhdlrwieee aikggcdvei knitdelgvl gvagpysrkv lqkltsddls dnvfkflqtk
      661 slkvsnipvt airisytgel gwelyhrrdd saalydaimn agqeegidnf gtyamnalrl
      721 ekafrawgse mncdtnplea glesfvklnk padfigkqal kqikakglkr rlvcltlatd
      781 dvdpegnesi wydgkvvgnt tsgsysyhiq kslafayvpv elskvgqqve vellgknypa
      841 vviqeplvlt eptrsrlqkt ggndki
//
LOCUS       XP_061014497             325 aa            linear   MAM 02-DEC-2023
DEFINITION  homeobox protein orthopedia [Dama dama].
ACCESSION   XP_061014497
VERSION     XP_061014497.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158514.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..325
                     /product="homeobox protein orthopedia"
                     /calculated_mol_wt=34001
     Region          106..156
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          303..320
                     /region_name="OAR"
                     /note="OAR motif; pfam03826"
                     /db_xref="CDD:461067"
     CDS             1..325
                     /gene="OTP"
                     /coded_by="XM_061158514.1:1..978"
                     /db_xref="GeneID:133067452"
ORIGIN      
        1 mlshadllda rlgmkdaael lghreavkcr lgvggsdpgg hpgdlapssd pvegatllpg
       61 edittvgstp aslavsakdp dkqpgpqggp npsqagqqqg qqkqkrhrtr ftpaqlnele
      121 rsfakthypd ifmreelalr igltesrvqv wfqnrrakwk krkkttnvfr apgtllptpg
      181 lpqfpsaaaa aaaamgdslc sfhandtrwa aaampgvsql plppalgrqq amaqslsqcs
      241 laagpppnsm glsnslagsn gaglqshlyq pafpgmvpas lpgpsnvsgs pqlcsspdss
      301 dvwrgtsias lrrkalehtv smsft
//
LOCUS       XP_061014499             206 aa            linear   MAM 02-DEC-2023
DEFINITION  eukaryotic translation initiation factor 2 subunit 3-like [Dama
            dama].
ACCESSION   XP_061014499
VERSION     XP_061014499.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158516.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..206
                     /product="eukaryotic translation initiation factor 2
                     subunit 3-like"
                     /calculated_mol_wt=22417
     Region          <1..200
                     /region_name="PTZ00327"
                     /note="eukaryotic translation initiation factor 2 gamma
                     subunit; Provisional"
                     /db_xref="CDD:240362"
     CDS             1..206
                     /gene="LOC133067453"
                     /coded_by="XM_061158516.1:435..1055"
                     /db_xref="GeneID:133067453"
ORIGIN      
        1 matmlngaav mdaallliag nescpqpqts ehlaaieimk lkhililqnk idlvkesqak
       61 eqyeqilafv qgvgtkidpt lcradrmvgq vlgavgalpe ifteleisyf llrwllgvrt
      121 egdkkaakvq klsknevlmv nigslstggr vsavkadlgk ivlthpvcte vgekialsrr
      181 vekhwrligw gqirrgvtik ptvddd
//
LOCUS       XP_061014500             135 aa            linear   MAM 02-DEC-2023
DEFINITION  small ribosomal subunit protein eS17-like [Dama dama].
ACCESSION   XP_061014500
VERSION     XP_061014500.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158517.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..135
                     /product="small ribosomal subunit protein eS17-like"
                     /calculated_mol_wt=15364
     Region          1..122
                     /region_name="Ribosomal_S17e"
                     /note="Ribosomal S17; pfam00833"
                     /db_xref="CDD:425895"
     CDS             1..135
                     /gene="LOC133067454"
                     /coded_by="XM_061158517.1:30..437"
                     /db_xref="GeneID:133067454"
ORIGIN      
        1 mgrvrtktvk kaarviieky ythlgndfht nkrvceeiai ipskklrnki agyvthlmkr
       61 iqrgpvrgis iklqeeerer rdnyvpevsa ldqeiievds dtkemlklld fgslsnlqvt
      121 qptvgmnfkt prgav
//
LOCUS       XP_061014501             446 aa            linear   MAM 02-DEC-2023
DEFINITION  D(1A) dopamine receptor [Dama dama].
ACCESSION   XP_061014501
VERSION     XP_061014501.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158518.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..446
                     /product="D(1A) dopamine receptor"
                     /calculated_mol_wt=49230
     Region          23..341
                     /region_name="7tmA_D1A_dopamine_R"
                     /note="D1A (or D1) subtype dopamine receptor, member of
                     the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15320"
                     /db_xref="CDD:320443"
     Region          25..51
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320443"
     Region          59..86
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320443"
     Region          96..126
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320443"
     Site            order(99,103..104,107..108,188,195,198..199,202,285,
                     288..289,292,313,317,321)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:320443"
     Region          138..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320443"
     Region          191..221
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320443"
     Region          265..295
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320443"
     Region          310..335
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320443"
     CDS             1..446
                     /gene="DRD1"
                     /coded_by="XM_061158518.1:1..1341"
                     /db_xref="GeneID:133067457"
ORIGIN      
        1 mrtlntsame gtglvaerdf sfriltacfl sllilstllg ntlvcaavir frhlrskvtn
       61 ffvislavsd llvavlvmpw kavaeiagfw pfgsfcniwv afdimcstas ilnlcvisvd
      121 rywaisspfr yerkmtpkaa filisvawtl svlisfipvq lswhkakptg psegnatsls
      181 ktinncdssl srtyaisssl isfyipvaim ivtytriyri aqkqirrisa leraavhakn
      241 cqtttgngnp mecsqpessf kmsfkretkv lktlsvimgv fvccwlpffi lncmvpfcgs
      301 getkpfcids itfdvfvwfg wansslnpii yafnadfrka fstllgcyrl cpttnnaiet
      361 vsinnngavv fsshheprgs iskdcnvvyl iphavgssed lkkeeaggiv kpleklspal
      421 svildydtdv slekiqpitq ngqhpt
//
LOCUS       XP_061014502             134 aa            linear   MAM 02-DEC-2023
DEFINITION  complexin-2 [Dama dama].
ACCESSION   XP_061014502
VERSION     XP_061014502.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158519.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..134
                     /product="complexin-2"
                     /calculated_mol_wt=15263
     Region          1..133
                     /region_name="Synaphin"
                     /note="Synaphin protein; pfam05835"
                     /db_xref="CDD:461755"
     CDS             1..134
                     /gene="CPLX2"
                     /coded_by="XM_061158519.1:244..648"
                     /db_xref="GeneID:133067458"
ORIGIN      
        1 mdfvmkqalg gatkdmgkml ggeeekdpda qkkeeerqea lrqqeeerka kharmeaere
       61 kvrqqirdky glkkkeekea eekaaleqpc egsltrpkka ipagcgdeee eeeesildtv
      121 lkylpgplqd mfkk
//
LOCUS       XP_061014503             134 aa            linear   MAM 02-DEC-2023
DEFINITION  complexin-2 [Dama dama].
ACCESSION   XP_061014503
VERSION     XP_061014503.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158520.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..134
                     /product="complexin-2"
                     /calculated_mol_wt=15263
     Region          1..133
                     /region_name="Synaphin"
                     /note="Synaphin protein; pfam05835"
                     /db_xref="CDD:461755"
     CDS             1..134
                     /gene="CPLX2"
                     /coded_by="XM_061158520.1:304..708"
                     /db_xref="GeneID:133067458"
ORIGIN      
        1 mdfvmkqalg gatkdmgkml ggeeekdpda qkkeeerqea lrqqeeerka kharmeaere
       61 kvrqqirdky glkkkeekea eekaaleqpc egsltrpkka ipagcgdeee eeeesildtv
      121 lkylpgplqd mfkk
//
LOCUS       XP_061014504             152 aa            linear   MAM 02-DEC-2023
DEFINITION  ARL14 effector protein-like [Dama dama].
ACCESSION   XP_061014504
VERSION     XP_061014504.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158521.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..152
                     /product="ARL14 effector protein-like"
                     /calculated_mol_wt=17146
     Region          36..138
                     /region_name="ARF7EP_C"
                     /note="ARF7 effector protein C-terminus; pfam14949"
                     /db_xref="CDD:464395"
     CDS             1..152
                     /gene="ARL14EPL"
                     /coded_by="XM_061158521.1:90..548"
                     /db_xref="GeneID:133067461"
ORIGIN      
        1 mseqsgkkns mqerpagqns pekngqigqk qlqqierqlk clafqnpgpq vadfnpetrq
       61 qkkkarmsqm neyfsvnskv vkkydksgrl icndadlcdc leknclgcfy pcpkcnsnkc
      121 gpecrcnrrw vydaivteag eviseqpfdi pd
//
LOCUS       XP_061014505             152 aa            linear   MAM 02-DEC-2023
DEFINITION  ARL14 effector protein-like [Dama dama].
ACCESSION   XP_061014505
VERSION     XP_061014505.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158522.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..152
                     /product="ARL14 effector protein-like"
                     /calculated_mol_wt=17146
     Region          36..138
                     /region_name="ARF7EP_C"
                     /note="ARF7 effector protein C-terminus; pfam14949"
                     /db_xref="CDD:464395"
     CDS             1..152
                     /gene="ARL14EPL"
                     /coded_by="XM_061158522.1:50..508"
                     /db_xref="GeneID:133067461"
ORIGIN      
        1 mseqsgkkns mqerpagqns pekngqigqk qlqqierqlk clafqnpgpq vadfnpetrq
       61 qkkkarmsqm neyfsvnskv vkkydksgrl icndadlcdc leknclgcfy pcpkcnsnkc
      121 gpecrcnrrw vydaivteag eviseqpfdi pd
//
LOCUS       XP_061014506             989 aa            linear   MAM 02-DEC-2023
DEFINITION  aminopeptidase Q [Dama dama].
ACCESSION   XP_061014506
VERSION     XP_061014506.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158523.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..989
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..989
                     /product="aminopeptidase Q"
                     /calculated_mol_wt=112411
     Region          103..571
                     /region_name="M1_APN-Q_like"
                     /note="Peptidase M1 aminopeptidase N catalytic domain
                     family which includes aminopeptidase N (APN),
                     aminopeptidase Q (APQ), tricorn interacting factor F3, and
                     endoplasmic reticulum aminopeptidase 1 (ERAP1); cd09601"
                     /db_xref="CDD:341064"
     Site            order(236,238,377..380,413..414,417,436,440,497,502)
                     /site_type="active"
                     /db_xref="CDD:341064"
     Region          646..969
                     /region_name="ERAP1_C"
                     /note="ERAP1-like C-terminal domain; pfam11838"
                     /db_xref="CDD:463368"
     CDS             1..989
                     /gene="LVRN"
                     /coded_by="XM_061158523.1:1..2970"
                     /db_xref="GeneID:133067462"
ORIGIN      
        1 mgppassgfy vsravallla glaaalllal avlaslyghc arappselrd rgapaaapsl
       61 pgqqeptaqp gptaepdvaa trsnrrppgp wdqlrlppwl vplhyelelw prlrpddlsa
      121 salrftgrvn itvrctaata rlllhslfld cesaavrgpl spdagdasag rvsvverwla
      181 vdmqylvlel gdalqpgsly elqlgfsgav sqdtreglfl nlytdqgerr allasqmept
      241 farnvfpcfd epalkatfni tiihhpryva lsnmpklsqs ekedvngskw tvtsfhttph
      301 mptylaafvi cdyehisrie rgkeiriwar kdaiadgnad falnitgpif sfledlfnis
      361 yplpktdiia lpafdnrame nwglltfdes llllqpndkl tekkimifyi vsheighqwf
      421 gnlvtmnwwn niwlnegfas yfefgiinhf npklprneif fsnilhgvlr edhalvsrav
      481 smkvesftet neinelfdlf tynkgaslar mlasflneki fisalksyle tfsysnaeqd
      541 dlwrhfqmai dhqskillpa tvksimdswt hqsgfpvitl nvstgvmkqe pfylgkvknq
      601 tllthndtwi ipilwikngt tqslvwldks skvfpemqvs dsdhdwviln lnvtgyyrvn
      661 ydklgwkkln qqlekdpkai pvihrlqlvd dafslskndy ieietaldlt kylaeedeii
      721 vwhavlmnlv trdlvsdvnn hdiypllkky llkrlisiwn tystiirenv talqedylal
      781 islekvfgta cwlgledclq lsrelfrnwm nhleneipnp iknvilcygi algndkewdf
      841 llkiynnntk eeeriqlaya mscskdpwil nrymdyaitv spftfnetnv ieavaasevg
      901 ryvakdflin nwqavseryg tqslvtllyv igrtistdsq ilelqqfcsn mleehqrltv
      961 qaklqtikne nlknkersar ivawlrknt
//
LOCUS       XP_061014507             200 aa            linear   MAM 02-DEC-2023
DEFINITION  cysteine dioxygenase type 1 [Dama dama].
ACCESSION   XP_061014507
VERSION     XP_061014507.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158524.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..200
                     /product="cysteine dioxygenase type 1"
                     /calculated_mol_wt=22850
     Region          2..170
                     /region_name="CDO_I"
                     /note="Cysteine dioxygenase type I; pfam05995"
                     /db_xref="CDD:428713"
     Site            order(58,60,75,86,88,140,155,157)
                     /site_type="active"
                     /db_xref="CDD:380416"
     CDS             1..200
                     /gene="CDO1"
                     /coded_by="XM_061158524.1:234..836"
                     /db_xref="GeneID:133067463"
ORIGIN      
        1 mertevlkpr tladlirvlh qlfageevnv eevqavleay esnpaewaly akfdqyrytr
       61 nlvdqgngkf nlmilcwgeg hgssihdhtd shcflkmlqg nlketlfawp dkksnemikk
      121 serilrenqc ayindsiglh rvenishtep avslhlyspp fdtchafdqr tghknkvtmt
      181 fhskfgirtp fatsgslenn
//
LOCUS       XP_061014508             841 aa            linear   MAM 02-DEC-2023
DEFINITION  small conductance calcium-activated potassium channel protein 2
            [Dama dama].
ACCESSION   XP_061014508
VERSION     XP_061014508.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158525.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..841
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..841
                     /product="small conductance calcium-activated potassium
                     channel protein 2"
                     /calculated_mol_wt=91902
     Region          383..492
                     /region_name="SK_channel"
                     /note="Calcium-activated SK potassium channel; pfam03530"
                     /db_xref="CDD:460958"
     Region          581..660
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     Region          674..749
                     /region_name="CaMBD"
                     /note="Calmodulin binding domain; smart01053"
                     /db_xref="CDD:198121"
     CDS             1..841
                     /gene="KCNN2"
                     /coded_by="XM_061158525.1:507..3032"
                     /db_xref="GeneID:133067467"
ORIGIN      
        1 mfrrrrkcdv mpivlvrptn rtrrldstga gmgpsshqqq esplptithc agcttawspc
       61 sfnspdmetp lqfqrgffse ppppppsras hlhcqqqqsq dkpcapfapl phpqhhphla
      121 hqqpgsggss pclrchscas sgapgagagd nlslllrtss pgggafrtrt ssplsgsscc
      181 cccssrrgsq lnvseltpss hasalrqqya qqpasasqch qchslqpaas ptgslgslgs
      241 gpplshhhhh phpaphqhhq pqarresnpf teiamsscry nggvmrplsn lsasrrnlhe
      301 mdseaqplqp pvsaggggga sspsaaasss apeivvskpe hnnsnnlaly gagggggtgg
      361 gggghgssak tskkknqnig yklghrralf ekrkrlsdya lifgmfgivv mvietelswg
      421 aydkaslysl alkclislst iillgliivy hareiqlfmv dngaddwria mtyeriffic
      481 leilvcaihp ipgnytftwt arlafsyaps tttadvdiil sipmflrlyl iarvmllhsk
      541 lftdassrsi galnkinfnt rfvmktlmti cpgtvllvfs islwiiaawt vraceryhdq
      601 qdvtsnflga mwlisitfls igygdmvpnt ycgkgvcllt gimgagctal vvavvarkle
      661 ltkaekhvhn fmmdtqltkr vknaaanvlr etwliykntk lvkkidhakv rkhqrkflqa
      721 ihqlrsvkme qrklndqant lvdlaktqni mydmisdlne rsedfekriv tletkletli
      781 gsihalpgli sqtirqqqrd fleaqmenyd khvpydaers rsssrrrrss stapptsses
      841 s
//
LOCUS       XP_061014509             841 aa            linear   MAM 02-DEC-2023
DEFINITION  small conductance calcium-activated potassium channel protein 2
            [Dama dama].
ACCESSION   XP_061014509
VERSION     XP_061014509.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158526.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..841
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..841
                     /product="small conductance calcium-activated potassium
                     channel protein 2"
                     /calculated_mol_wt=91902
     Region          383..492
                     /region_name="SK_channel"
                     /note="Calcium-activated SK potassium channel; pfam03530"
                     /db_xref="CDD:460958"
     Region          581..660
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     Region          674..749
                     /region_name="CaMBD"
                     /note="Calmodulin binding domain; smart01053"
                     /db_xref="CDD:198121"
     CDS             1..841
                     /gene="KCNN2"
                     /coded_by="XM_061158526.1:271..2796"
                     /db_xref="GeneID:133067467"
ORIGIN      
        1 mfrrrrkcdv mpivlvrptn rtrrldstga gmgpsshqqq esplptithc agcttawspc
       61 sfnspdmetp lqfqrgffse ppppppsras hlhcqqqqsq dkpcapfapl phpqhhphla
      121 hqqpgsggss pclrchscas sgapgagagd nlslllrtss pgggafrtrt ssplsgsscc
      181 cccssrrgsq lnvseltpss hasalrqqya qqpasasqch qchslqpaas ptgslgslgs
      241 gpplshhhhh phpaphqhhq pqarresnpf teiamsscry nggvmrplsn lsasrrnlhe
      301 mdseaqplqp pvsaggggga sspsaaasss apeivvskpe hnnsnnlaly gagggggtgg
      361 gggghgssak tskkknqnig yklghrralf ekrkrlsdya lifgmfgivv mvietelswg
      421 aydkaslysl alkclislst iillgliivy hareiqlfmv dngaddwria mtyeriffic
      481 leilvcaihp ipgnytftwt arlafsyaps tttadvdiil sipmflrlyl iarvmllhsk
      541 lftdassrsi galnkinfnt rfvmktlmti cpgtvllvfs islwiiaawt vraceryhdq
      601 qdvtsnflga mwlisitfls igygdmvpnt ycgkgvcllt gimgagctal vvavvarkle
      661 ltkaekhvhn fmmdtqltkr vknaaanvlr etwliykntk lvkkidhakv rkhqrkflqa
      721 ihqlrsvkme qrklndqant lvdlaktqni mydmisdlne rsedfekriv tletkletli
      781 gsihalpgli sqtirqqqrd fleaqmenyd khvpydaers rsssrrrrss stapptsses
      841 s
//
LOCUS       XP_061014510             141 aa            linear   MAM 02-DEC-2023
DEFINITION  ribonuclease pancreatic-like [Dama dama].
ACCESSION   XP_061014510
VERSION     XP_061014510.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158527.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083692) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="12"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..141
                     /product="ribonuclease pancreatic-like"
                     /calculated_mol_wt=16103
     Region          24..140
                     /region_name="RNase_A_canonical"
                     /note="Canonical RNase A family includes all vertebrate
                     homologues to the bovine pancreatic ribonuclease A (RNase
                     A) that contain the catalytic site, necessary for RNase
                     activity. In the human genome 8 RNases, refered to as
                     'canonical' RNases, have been...; cd06265"
                     /db_xref="CDD:119387"
     Site            order(24..33,43,47,49..51,60,63..68,103,122,136)
                     /site_type="active"
                     /note="dimerization with domain swap [active]"
                     /db_xref="CDD:119387"
     Site            order(28,60,64,92,104,138..139)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:119387"
     Site            order(61,95,106,121,123,125..126,128)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:119387"
     CDS             1..141
                     /gene="LOC133067468"
                     /coded_by="XM_061158527.1:1..426"
                     /db_xref="GeneID:133067468"
ORIGIN      
        1 mnltwilllf llleltvftp glpfsrrhid nprswvpgrq hrycdvmmrr rwlihrgrck
       61 qintfihedl atiadfcttp avpctssrsl qschnsshdv svtdcfakag trppychyqk
      121 kdsirpirvg ckdgapvhld s
//
LOCUS       XP_061014524             240 aa            linear   MAM 02-DEC-2023
DEFINITION  small nuclear ribonucleoprotein-associated protein N isoform X1
            [Dama dama].
ACCESSION   XP_061014524
VERSION     XP_061014524.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158541.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..240
                     /product="small nuclear ribonucleoprotein-associated
                     protein N isoform X1"
                     /calculated_mol_wt=24491
     Region          5..83
                     /region_name="Sm_B"
                     /note="Sm protein B; cd01717"
                     /db_xref="CDD:212464"
     Site            order(8,14,22..23,32,36,43..44,69..82)
                     /site_type="other"
                     /note="heptamer interface [polypeptide binding]"
                     /db_xref="CDD:212464"
     Site            order(17..23,25..37,39..43)
                     /site_type="other"
                     /note="Sm1 motif"
                     /db_xref="CDD:212464"
     Site            order(20..25,27,33..34,37,39,41,60,65,67,69..79)
                     /site_type="other"
                     /note="putative hexamer interface [polypeptide binding]"
                     /db_xref="CDD:212464"
     Site            order(36..39,49,59..61,73,75)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:212464"
     Site            69..80
                     /site_type="other"
                     /note="Sm2 motif"
                     /db_xref="CDD:212464"
     CDS             1..240
                     /gene="SNRPN"
                     /coded_by="XM_061158541.1:340..1062"
                     /db_xref="GeneID:133067717"
ORIGIN      
        1 mtvgksskml qhidyrmrci lqdgrifigt fkafdkhmnl ilcdcdefrk ikpknakqpe
       61 reekrvlglv llrgenlvsm tvegpppkdt giarvplaga aggpgvgraa grgvpagvpi
      121 pqapaglagp vrgvggpsqq vmtpqgrgtv aaaavaatas iagaptqypp grgtaptpvg
      181 ratpppgima pppgmrppmg ppiglpptrg tpigmpppgm rppppgirgp pppgmrpprp
//
LOCUS       XP_061014525             240 aa            linear   MAM 02-DEC-2023
DEFINITION  small nuclear ribonucleoprotein-associated protein N isoform X1
            [Dama dama].
ACCESSION   XP_061014525
VERSION     XP_061014525.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158542.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..240
                     /product="small nuclear ribonucleoprotein-associated
                     protein N isoform X1"
                     /calculated_mol_wt=24491
     Region          5..83
                     /region_name="Sm_B"
                     /note="Sm protein B; cd01717"
                     /db_xref="CDD:212464"
     Site            order(8,14,22..23,32,36,43..44,69..82)
                     /site_type="other"
                     /note="heptamer interface [polypeptide binding]"
                     /db_xref="CDD:212464"
     Site            order(17..23,25..37,39..43)
                     /site_type="other"
                     /note="Sm1 motif"
                     /db_xref="CDD:212464"
     Site            order(20..25,27,33..34,37,39,41,60,65,67,69..79)
                     /site_type="other"
                     /note="putative hexamer interface [polypeptide binding]"
                     /db_xref="CDD:212464"
     Site            order(36..39,49,59..61,73,75)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:212464"
     Site            69..80
                     /site_type="other"
                     /note="Sm2 motif"
                     /db_xref="CDD:212464"
     CDS             1..240
                     /gene="SNRPN"
                     /coded_by="XM_061158542.1:340..1062"
                     /db_xref="GeneID:133067717"
ORIGIN      
        1 mtvgksskml qhidyrmrci lqdgrifigt fkafdkhmnl ilcdcdefrk ikpknakqpe
       61 reekrvlglv llrgenlvsm tvegpppkdt giarvplaga aggpgvgraa grgvpagvpi
      121 pqapaglagp vrgvggpsqq vmtpqgrgtv aaaavaatas iagaptqypp grgtaptpvg
      181 ratpppgima pppgmrppmg ppiglpptrg tpigmpppgm rppppgirgp pppgmrpprp
//
LOCUS       XP_061014526             240 aa            linear   MAM 02-DEC-2023
DEFINITION  small nuclear ribonucleoprotein-associated protein N isoform X1
            [Dama dama].
ACCESSION   XP_061014526
VERSION     XP_061014526.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158543.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..240
                     /product="small nuclear ribonucleoprotein-associated
                     protein N isoform X1"
                     /calculated_mol_wt=24491
     Region          5..83
                     /region_name="Sm_B"
                     /note="Sm protein B; cd01717"
                     /db_xref="CDD:212464"
     Site            order(8,14,22..23,32,36,43..44,69..82)
                     /site_type="other"
                     /note="heptamer interface [polypeptide binding]"
                     /db_xref="CDD:212464"
     Site            order(17..23,25..37,39..43)
                     /site_type="other"
                     /note="Sm1 motif"
                     /db_xref="CDD:212464"
     Site            order(20..25,27,33..34,37,39,41,60,65,67,69..79)
                     /site_type="other"
                     /note="putative hexamer interface [polypeptide binding]"
                     /db_xref="CDD:212464"
     Site            order(36..39,49,59..61,73,75)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:212464"
     Site            69..80
                     /site_type="other"
                     /note="Sm2 motif"
                     /db_xref="CDD:212464"
     CDS             1..240
                     /gene="SNRPN"
                     /coded_by="XM_061158543.1:113..835"
                     /db_xref="GeneID:133067717"
ORIGIN      
        1 mtvgksskml qhidyrmrci lqdgrifigt fkafdkhmnl ilcdcdefrk ikpknakqpe
       61 reekrvlglv llrgenlvsm tvegpppkdt giarvplaga aggpgvgraa grgvpagvpi
      121 pqapaglagp vrgvggpsqq vmtpqgrgtv aaaavaatas iagaptqypp grgtaptpvg
      181 ratpppgima pppgmrppmg ppiglpptrg tpigmpppgm rppppgirgp pppgmrpprp
//
LOCUS       XP_061014527             232 aa            linear   MAM 02-DEC-2023
DEFINITION  small nuclear ribonucleoprotein-associated protein N isoform X2
            [Dama dama].
ACCESSION   XP_061014527
VERSION     XP_061014527.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158544.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..232
                     /product="small nuclear ribonucleoprotein-associated
                     protein N isoform X2"
                     /calculated_mol_wt=23672
     Region          1..75
                     /region_name="Sm_B"
                     /note="Sm protein B; cd01717"
                     /db_xref="CDD:212464"
     Site            order(6,14..15,24,28,35..36,61..74)
                     /site_type="other"
                     /note="heptamer interface [polypeptide binding]"
                     /db_xref="CDD:212464"
     Site            order(9..15,17..29,31..35)
                     /site_type="other"
                     /note="Sm1 motif"
                     /db_xref="CDD:212464"
     Site            order(12..17,19,25..26,29,31,33,52,57,59,61..71)
                     /site_type="other"
                     /note="putative hexamer interface [polypeptide binding]"
                     /db_xref="CDD:212464"
     Site            order(28..31,41,51..53,65,67)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:212464"
     Site            61..72
                     /site_type="other"
                     /note="Sm2 motif"
                     /db_xref="CDD:212464"
     CDS             1..232
                     /gene="SNRPN"
                     /coded_by="XM_061158544.1:148..846"
                     /db_xref="GeneID:133067717"
ORIGIN      
        1 mlqhidyrmr cilqdgrifi gtfkafdkhm nlilcdcdef rkikpknakq pereekrvlg
       61 lvllrgenlv smtvegpppk dtgiarvpla gaaggpgvgr aagrgvpagv pipqapagla
      121 gpvrgvggps qqvmtpqgrg tvaaaavaat asiagaptqy ppgrgtaptp vgratpppgi
      181 mapppgmrpp mgppiglppt rgtpigmppp gmrppppgir gppppgmrpp rp
//
LOCUS       XP_061014528              71 aa            linear   MAM 02-DEC-2023
DEFINITION  SNRPN upstream reading frame protein [Dama dama].
ACCESSION   XP_061014528
VERSION     XP_061014528.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158545.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..71
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..71
                     /product="SNRPN upstream reading frame protein"
                     /calculated_mol_wt=8306
     Region          1..69
                     /region_name="SNURF"
                     /note="SNURF/RPN4 protein; pfam07192"
                     /db_xref="CDD:462115"
     CDS             1..71
                     /gene="SNURF"
                     /coded_by="XM_061158545.1:126..341"
                     /db_xref="GeneID:133067719"
ORIGIN      
        1 merardrlhl rrtteqhvpe vevqvkrrrt aslsnqechl ylrrsqqqqv pvvdfqaelr
       61 qaflaetprg g
//
LOCUS       XP_061014529             875 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin-protein ligase E3A isoform X1 [Dama dama].
ACCESSION   XP_061014529
VERSION     XP_061014529.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158546.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..875
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..875
                     /product="ubiquitin-protein ligase E3A isoform X1"
                     /calculated_mol_wt=100227
     Region          27..81
                     /region_name="AZUL"
                     /note="Amino-terminal Zinc-binding domain of ubiquitin
                     ligase E3A; pfam16558"
                     /db_xref="CDD:465173"
     Region          523..873
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cd00078"
                     /db_xref="CDD:238033"
     Site            order(529,562,573,630,808,837..838,841..845,865,872)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Site            order(658,661..662,664..665,668,676,678,682..683,685,691,
                     696,713,717)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..875
                     /gene="UBE3A"
                     /coded_by="XM_061158546.1:258..2885"
                     /db_xref="GeneID:133067720"
ORIGIN      
        1 matackrssg epqsddieas rmkraaakhl ieryyhqlte gcgneactne fcascptfrr
       61 mdnnaaaika lelykinakl cdphpskkga ssaylenskg asnncsdikm nkkdgqgard
      121 dfkdvtylte emvyeilelc reredyspli rvigrvfssa ealvqsfrkv kqhtkeelks
      181 lqgkdedkde dekekaacsa aameedseas ssrisdssqg dnnlqklgpd dvsvdieair
      241 rvytrllsne kietaflnal vylspnvecd ltyhnvysrd pnylnlfiiv menrnlhspe
      301 ylemalplfc kamsklplaa qgklvrlwsk ysadqirrmm etfqqlityk vistdfnnrn
      361 lvndddaiva askclkmvyy anvvggevdt nhneeddeep lpesseltlq ellgeerrnk
      421 kgprvdplet elavktldcr kplipfeefi neplndvlem dkdytffkve tenkfsfmtc
      481 pfilnavtkn lglyydnrir myserritvl yslvqgqqln pylrlkvrrd hiiddalvrl
      541 emiamenpad lkkqlyvefe geqgvdeggv skeffqlvve eifnpdigmf tydestklfw
      601 fnpssfeteg qftligivlg laiynncild vhfpmvvyrk lmgkkgtfld lgdshpvlyq
      661 slkdlleyeg nveddmmitf qisqtdlfgn pmmydlkeng dkipitnenr kefvnlysdy
      721 ilnksvekqf kafrrgfhmv tnesplkylf rpeeiellic gsrnldfqal eetteydggy
      781 trdsvviref weivhsftde qkrlflqftt gtdrapvggl gklkmiiakn gpdterlpts
      841 htcfnvlllp eysskeklke rllkaityak gfgml
//
LOCUS       XP_061014530             854 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin-protein ligase E3A isoform X2 [Dama dama].
ACCESSION   XP_061014530
VERSION     XP_061014530.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158547.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..854
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..854
                     /product="ubiquitin-protein ligase E3A isoform X2"
                     /calculated_mol_wt=98006
     Region          6..60
                     /region_name="AZUL"
                     /note="Amino-terminal Zinc-binding domain of ubiquitin
                     ligase E3A; pfam16558"
                     /db_xref="CDD:465173"
     Region          502..852
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cd00078"
                     /db_xref="CDD:238033"
     Site            order(508,541,552,609,787,816..817,820..824,844,851)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Site            order(637,640..641,643..644,647,655,657,661..662,664,670,
                     675,692,696)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..854
                     /gene="UBE3A"
                     /coded_by="XM_061158547.1:517..3081"
                     /db_xref="GeneID:133067720"
ORIGIN      
        1 mkraaakhli eryyhqlteg cgneactnef cascptfrrm dnnaaaikal elykinaklc
       61 dphpskkgas saylenskga snncsdikmn kkdgqgardd fkdvtyltee mvyeilelcr
      121 eredysplir vigrvfssae alvqsfrkvk qhtkeelksl qgkdedkded ekekaacsaa
      181 ameedseass srisdssqgd nnlqklgpdd vsvdieairr vytrllsnek ietaflnalv
      241 ylspnvecdl tyhnvysrdp nylnlfiivm enrnlhspey lemalplfck amsklplaaq
      301 gklvrlwsky sadqirrmme tfqqlitykv istdfnnrnl vndddaivaa skclkmvyya
      361 nvvggevdtn hneeddeepl pesseltlqe llgeerrnkk gprvdplete lavktldcrk
      421 plipfeefin eplndvlemd kdytffkvet enkfsfmtcp filnavtknl glyydnrirm
      481 yserritvly slvqgqqlnp ylrlkvrrdh iiddalvrle miamenpadl kkqlyvefeg
      541 eqgvdeggvs keffqlvvee ifnpdigmft ydestklfwf npssfetegq ftligivlgl
      601 aiynncildv hfpmvvyrkl mgkkgtfldl gdshpvlyqs lkdlleyegn veddmmitfq
      661 isqtdlfgnp mmydlkengd kipitnenrk efvnlysdyi lnksvekqfk afrrgfhmvt
      721 nesplkylfr peeiellicg srnldfqale etteydggyt rdsvvirefw eivhsftdeq
      781 krlflqfttg tdrapvgglg klkmiiakng pdterlptsh tcfnvlllpe ysskeklker
      841 llkaityakg fgml
//
LOCUS       XP_061014531             854 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin-protein ligase E3A isoform X2 [Dama dama].
ACCESSION   XP_061014531
VERSION     XP_061014531.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158548.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..854
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..854
                     /product="ubiquitin-protein ligase E3A isoform X2"
                     /calculated_mol_wt=98006
     Region          6..60
                     /region_name="AZUL"
                     /note="Amino-terminal Zinc-binding domain of ubiquitin
                     ligase E3A; pfam16558"
                     /db_xref="CDD:465173"
     Region          502..852
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cd00078"
                     /db_xref="CDD:238033"
     Site            order(508,541,552,609,787,816..817,820..824,844,851)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Site            order(637,640..641,643..644,647,655,657,661..662,664,670,
                     675,692,696)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..854
                     /gene="UBE3A"
                     /coded_by="XM_061158548.1:198..2762"
                     /db_xref="GeneID:133067720"
ORIGIN      
        1 mkraaakhli eryyhqlteg cgneactnef cascptfrrm dnnaaaikal elykinaklc
       61 dphpskkgas saylenskga snncsdikmn kkdgqgardd fkdvtyltee mvyeilelcr
      121 eredysplir vigrvfssae alvqsfrkvk qhtkeelksl qgkdedkded ekekaacsaa
      181 ameedseass srisdssqgd nnlqklgpdd vsvdieairr vytrllsnek ietaflnalv
      241 ylspnvecdl tyhnvysrdp nylnlfiivm enrnlhspey lemalplfck amsklplaaq
      301 gklvrlwsky sadqirrmme tfqqlitykv istdfnnrnl vndddaivaa skclkmvyya
      361 nvvggevdtn hneeddeepl pesseltlqe llgeerrnkk gprvdplete lavktldcrk
      421 plipfeefin eplndvlemd kdytffkvet enkfsfmtcp filnavtknl glyydnrirm
      481 yserritvly slvqgqqlnp ylrlkvrrdh iiddalvrle miamenpadl kkqlyvefeg
      541 eqgvdeggvs keffqlvvee ifnpdigmft ydestklfwf npssfetegq ftligivlgl
      601 aiynncildv hfpmvvyrkl mgkkgtfldl gdshpvlyqs lkdlleyegn veddmmitfq
      661 isqtdlfgnp mmydlkengd kipitnenrk efvnlysdyi lnksvekqfk afrrgfhmvt
      721 nesplkylfr peeiellicg srnldfqale etteydggyt rdsvvirefw eivhsftdeq
      781 krlflqfttg tdrapvgglg klkmiiakng pdterlptsh tcfnvlllpe ysskeklker
      841 llkaityakg fgml
//
LOCUS       XP_061014532             854 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin-protein ligase E3A isoform X2 [Dama dama].
ACCESSION   XP_061014532
VERSION     XP_061014532.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158549.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..854
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..854
                     /product="ubiquitin-protein ligase E3A isoform X2"
                     /calculated_mol_wt=98006
     Region          6..60
                     /region_name="AZUL"
                     /note="Amino-terminal Zinc-binding domain of ubiquitin
                     ligase E3A; pfam16558"
                     /db_xref="CDD:465173"
     Region          502..852
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cd00078"
                     /db_xref="CDD:238033"
     Site            order(508,541,552,609,787,816..817,820..824,844,851)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Site            order(637,640..641,643..644,647,655,657,661..662,664,670,
                     675,692,696)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..854
                     /gene="UBE3A"
                     /coded_by="XM_061158549.1:115..2679"
                     /db_xref="GeneID:133067720"
ORIGIN      
        1 mkraaakhli eryyhqlteg cgneactnef cascptfrrm dnnaaaikal elykinaklc
       61 dphpskkgas saylenskga snncsdikmn kkdgqgardd fkdvtyltee mvyeilelcr
      121 eredysplir vigrvfssae alvqsfrkvk qhtkeelksl qgkdedkded ekekaacsaa
      181 ameedseass srisdssqgd nnlqklgpdd vsvdieairr vytrllsnek ietaflnalv
      241 ylspnvecdl tyhnvysrdp nylnlfiivm enrnlhspey lemalplfck amsklplaaq
      301 gklvrlwsky sadqirrmme tfqqlitykv istdfnnrnl vndddaivaa skclkmvyya
      361 nvvggevdtn hneeddeepl pesseltlqe llgeerrnkk gprvdplete lavktldcrk
      421 plipfeefin eplndvlemd kdytffkvet enkfsfmtcp filnavtknl glyydnrirm
      481 yserritvly slvqgqqlnp ylrlkvrrdh iiddalvrle miamenpadl kkqlyvefeg
      541 eqgvdeggvs keffqlvvee ifnpdigmft ydestklfwf npssfetegq ftligivlgl
      601 aiynncildv hfpmvvyrkl mgkkgtfldl gdshpvlyqs lkdlleyegn veddmmitfq
      661 isqtdlfgnp mmydlkengd kipitnenrk efvnlysdyi lnksvekqfk afrrgfhmvt
      721 nesplkylfr peeiellicg srnldfqale etteydggyt rdsvvirefw eivhsftdeq
      781 krlflqfttg tdrapvgglg klkmiiakng pdterlptsh tcfnvlllpe ysskeklker
      841 llkaityakg fgml
//
LOCUS       XP_061014533             815 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin-protein ligase E3A isoform X3 [Dama dama].
ACCESSION   XP_061014533
VERSION     XP_061014533.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158550.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..815
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..815
                     /product="ubiquitin-protein ligase E3A isoform X3"
                     /calculated_mol_wt=93517
     Region          463..813
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cd00078"
                     /db_xref="CDD:238033"
     Site            order(469,502,513,570,748,777..778,781..785,805,812)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Site            order(598,601..602,604..605,608,616,618,622..623,625,631,
                     636,653,657)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..815
                     /gene="UBE3A"
                     /coded_by="XM_061158550.1:743..3190"
                     /db_xref="GeneID:133067720"
ORIGIN      
        1 mdnnaaaika lelykinakl cdphpskkga ssaylenskg asnncsdikm nkkdgqgard
       61 dfkdvtylte emvyeilelc reredyspli rvigrvfssa ealvqsfrkv kqhtkeelks
      121 lqgkdedkde dekekaacsa aameedseas ssrisdssqg dnnlqklgpd dvsvdieair
      181 rvytrllsne kietaflnal vylspnvecd ltyhnvysrd pnylnlfiiv menrnlhspe
      241 ylemalplfc kamsklplaa qgklvrlwsk ysadqirrmm etfqqlityk vistdfnnrn
      301 lvndddaiva askclkmvyy anvvggevdt nhneeddeep lpesseltlq ellgeerrnk
      361 kgprvdplet elavktldcr kplipfeefi neplndvlem dkdytffkve tenkfsfmtc
      421 pfilnavtkn lglyydnrir myserritvl yslvqgqqln pylrlkvrrd hiiddalvrl
      481 emiamenpad lkkqlyvefe geqgvdeggv skeffqlvve eifnpdigmf tydestklfw
      541 fnpssfeteg qftligivlg laiynncild vhfpmvvyrk lmgkkgtfld lgdshpvlyq
      601 slkdlleyeg nveddmmitf qisqtdlfgn pmmydlkeng dkipitnenr kefvnlysdy
      661 ilnksvekqf kafrrgfhmv tnesplkylf rpeeiellic gsrnldfqal eetteydggy
      721 trdsvviref weivhsftde qkrlflqftt gtdrapvggl gklkmiiakn gpdterlpts
      781 htcfnvlllp eysskeklke rllkaityak gfgml
//
LOCUS       XP_061014534            1481 aa            linear   MAM 02-DEC-2023
DEFINITION  phospholipid-transporting ATPase VA [Dama dama].
ACCESSION   XP_061014534
VERSION     XP_061014534.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158551.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1481
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1481
                     /product="phospholipid-transporting ATPase VA"
                     /calculated_mol_wt=163765
     Region          61..1176
                     /region_name="P-type_ATPase_APLT_Dnf-like"
                     /note="Aminophospholipid translocases (APLTs), similar to
                     Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2,
                     -10D, -11B, -11C; cd02073"
                     /db_xref="CDD:319770"
     Site            order(427..429,735,759..761,835,882..884,992,995,998,1018,
                     1021)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:319770"
     CDS             1..1481
                     /gene="ATP10A"
                     /coded_by="XM_061158551.1:1..4446"
                     /db_xref="GeneID:133067721"
ORIGIN      
        1 merepaaaae epgppgrrrr rregrtrtvc snlqpppgae epagkgaprr rlrggaqhla
       61 dnrlkttkyt llsflpknlf eqfhrlanvy fvfiallnfv pavnafqpgl alapvlfila
      121 vtafkdlwed ysrhrsdhei nhlgclvfsr eekqyvnrfw keirvgdfvr lrcnetipad
      181 illlsssdpd glchietanl dgetnlkrrq vvrgfselvs efnpltftsi iecekpnndl
      241 srfrgciihd ngkkaglyke nlllrgctlr nteavvgivi yaghetkall nnsgprykrs
      301 qlerqmncdv lwcvlllicm slfsaighgl wvqryqekks lfdvpesdgt slspvpaavy
      361 sfltmiivlq vlipislyvs ieivkvcqvy finqdielyd eetdsqlqcr alnitedlgq
      421 iqyifsdktg tltenkmvfr rctvsgieys hdanaqrlar yqeadseeee vvprggslpl
      481 rggagghqsq ssrahrrtgs raearrvsml teltafsspm ekdvtpdpkl lekvrecgrc
      541 lasarhqehp ldhlspelsd vfdffialti cntvvvtspd qprqkvrvrf elkspvktie
      601 dflrkftpsr ltlggssvgs asvaaksapk agllstland gtlrrleerl gagapqlasn
      661 gyssaaggwt adhsatgpep rpelryeaes pdeaalvhaa rayscalvgr lhdqvsvelp
      721 hlgsltfell htlgfdsirk rmsvvirhpl tdeinvytkg adsvvmdlll pcstddargr
      781 hqmkirsetq nylnlyaveg lrtlciakrv lskeeyacwl qshleaesal dnreellfqs
      841 airletnlhl lgatgiedrl qdgvpetiak lrqaglqiwv ltgdkqetai niahacklld
      901 hdeevitlna esqeaceall dqclryvqsc spqrtagsls vgfaplcpps eatasgpslv
      961 idgrslayal qknledkflf lakqcrsvlc crstplqksm vvklvrsklk amtlaigdga
     1021 ndvsmiqvad vgvgisgqeg mqavmasdfa vpkfrylerl livhghwcys rlanmvlyff
     1081 ykntmfvgll fwfqfycgfs asamidqwyl iffnllfssl pqlvtgvldk dvpadvllae
     1141 pqlyrsgqnm eeyrprtfwl nmadaafqsl vcffipylay ydsdtdiftw gtpitaialf
     1201 tfllhlgiet ktwtwlnwta cgfsvvlfft valiynasca tcyppsnpyw tmqalmgdpv
     1261 fycicllapv aallprlffk alqgtlfptp lqlgrqlakq spgkfrapge tsaqghipge
     1321 arteppgqrs isaarsvsqd cssrvsrgtr qpacspeagg epsavdvgvl rregtlpdgl
     1381 grqpsrsssp gpvamegypg gsrmkpvsss rpaplpsvfs vpglsslnwm sslslvgglg
     1441 svlqfsrsgl hmdkrdgdfl pgsappdrdl cglsgqttdc f
//
LOCUS       XP_061014535             205 aa            linear   MAM 02-DEC-2023
DEFINITION  selenoprotein S isoform X1 [Dama dama].
ACCESSION   XP_061014535
VERSION     XP_061014535.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158552.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..205
                     /product="selenoprotein S isoform X1"
                     /calculated_mol_wt=22971
     Region          2..205
                     /region_name="Selenoprotein_S"
                     /note="Selenoprotein S (SelS); pfam06936"
                     /db_xref="CDD:462043"
     CDS             1..205
                     /gene="SELENOS"
                     /coded_by="XM_061158552.1:94..711"
                     /db_xref="GeneID:133067722"
ORIGIN      
        1 merdgdqlsa rpaleteglr flhvtvgsll atygwyivfs cillyvvfqk lstrlralrq
       61 rhldqaaaal epdivvkrqe alaaarlkmq eelnaqvekh keklrqleee krrqkiemwd
      121 smqegksykg ntrkpqqeed spgpstssvi pkrksdrkpl rggglketes qgvgdqrfys
      181 ynplsgeggg tcswrpgrrg pssgg
//
LOCUS       XP_061014536             204 aa            linear   MAM 02-DEC-2023
DEFINITION  selenoprotein S isoform X2 [Dama dama].
ACCESSION   XP_061014536
VERSION     XP_061014536.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158553.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..204
                     /product="selenoprotein S isoform X2"
                     /calculated_mol_wt=22843
     Region          2..204
                     /region_name="Selenoprotein_S"
                     /note="Selenoprotein S (SelS); pfam06936"
                     /db_xref="CDD:462043"
     CDS             1..204
                     /gene="SELENOS"
                     /coded_by="XM_061158553.1:92..706"
                     /db_xref="GeneID:133067722"
ORIGIN      
        1 merdgdqlsa rpaleteglr flhvtvgsll atygwyivfs cillyvvfqk lstrlralrq
       61 rhldqaaaal epdivvkrqe alaaarlkmq eelnaqvekh keklrqleee krrqkiemwd
      121 smqegksykg ntrkpqeeds pgpstssvip krksdrkplr ggglketesq gvgdqrfysy
      181 nplsgegggt cswrpgrrgp ssgg
//
LOCUS       XP_061014537             189 aa            linear   MAM 02-DEC-2023
DEFINITION  selenoprotein S isoform X3 [Dama dama].
ACCESSION   XP_061014537
VERSION     XP_061014537.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158554.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..189
                     /product="selenoprotein S isoform X3"
                     /calculated_mol_wt=21145
     Region          2..189
                     /region_name="Selenoprotein_S"
                     /note="Selenoprotein S (SelS); pfam06936"
                     /db_xref="CDD:462043"
     CDS             1..189
                     /gene="SELENOS"
                     /coded_by="XM_061158554.1:91..660"
                     /db_xref="GeneID:133067722"
ORIGIN      
        1 merdgdqlsa rpaleteglr flhvtvgsll atygwyivfs cillyvvfqk lstrlralrq
       61 rhldqaaaal epdivvkrqe alaaarlkmq eelnaqvekh keklrqleee krrqkiemwd
      121 smqegksykg ntrkpqqeed spgpstssvi pkrksdrkpl rgggynplsg egggtcswrp
      181 grrgpssgg
//
LOCUS       XP_061014538             188 aa            linear   MAM 02-DEC-2023
DEFINITION  selenoprotein S isoform X4 [Dama dama].
ACCESSION   XP_061014538
VERSION     XP_061014538.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158555.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..188
                     /product="selenoprotein S isoform X4"
                     /calculated_mol_wt=21017
     Region          2..188
                     /region_name="Selenoprotein_S"
                     /note="Selenoprotein S (SelS); pfam06936"
                     /db_xref="CDD:462043"
     CDS             1..188
                     /gene="SELENOS"
                     /coded_by="XM_061158555.1:88..654"
                     /db_xref="GeneID:133067722"
ORIGIN      
        1 merdgdqlsa rpaleteglr flhvtvgsll atygwyivfs cillyvvfqk lstrlralrq
       61 rhldqaaaal epdivvkrqe alaaarlkmq eelnaqvekh keklrqleee krrqkiemwd
      121 smqegksykg ntrkpqeeds pgpstssvip krksdrkplr gggynplsge gggtcswrpg
      181 rrgpssgg
//
LOCUS       XP_061014539             803 aa            linear   MAM 02-DEC-2023
DEFINITION  chondroitin sulfate synthase 1 isoform X1 [Dama dama].
ACCESSION   XP_061014539
VERSION     XP_061014539.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158556.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..803
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..803
                     /product="chondroitin sulfate synthase 1 isoform X1"
                     /calculated_mol_wt=91968
     Region          88..309
                     /region_name="Galactosyl_T"
                     /note="Galactosyltransferase; cl21608"
                     /db_xref="CDD:473923"
     Region          239..778
                     /region_name="CHGN"
                     /note="Chondroitin N-acetylgalactosaminyltransferase;
                     pfam05679"
                     /db_xref="CDD:461712"
     CDS             1..803
                     /gene="CHSY1"
                     /coded_by="XM_061158556.1:1..2412"
                     /db_xref="GeneID:133067725"
ORIGIN      
        1 mavrgrrawl svllglvlgf vlasrlvlpr aselkragpr rraspeacrp gqaaavplag
       61 gargdargqr lwphgeaqdg iprdrnflfv gvmtaqkylq travaafrtw sktipgkvef
      121 fssegsdtsi sipvvplrgv ddsyppqkks fmmlkymhdh yldkyewfmr adddvyikgd
      181 rlesflrsln sseplflgqt glgtteemgk lalepgenfc mggpgvimsr evlrrmvphi
      241 gkclremytt hedvevgrcv rrfagvqcvw syemqqlfye nyeqnkkgyi rdlhnskihr
      301 aitlhpnknp pyqyrlhsym lsrkiaelrh rtiqlhreiv lmskysntev hkedlqlgip
      361 psfmrfqprq reeilewefl tgkylysaad sqpprrgmds aqrealddiv mqvmeminan
      421 aktrgriidf keiqygyrrv npmygaeyil dllllykkhk gkkmtvpvrr haylqqtfsk
      481 iqfveheeld akelankinq esgslsflsn slkklvpfql pgsknehkep kekkinilip
      541 lsgrfdmfvr fmgnfektcl ipnqnvklvv llfnsdsnpd kakqvelmrd yrikypkadm
      601 qilpvsgefs ralalevgss qfnnesllff cdvdlvftae flqrcrantv lgqqiyfpii
      661 fsqydpkivy sgkvpsdnhf aftqktgfwr nygfgitciy kgdlvrvggf dvsiqgwgle
      721 dvdlfnkvvq aglktfrsqe vgvvhvhhpv fcdpnldpkq ykmclgskas tygstqqlae
      781 mwlekndpny skssnnngsv rta
//
LOCUS       XP_061014540             706 aa            linear   MAM 02-DEC-2023
DEFINITION  chondroitin sulfate synthase 1 isoform X2 [Dama dama].
ACCESSION   XP_061014540
VERSION     XP_061014540.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158557.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..706
                     /product="chondroitin sulfate synthase 1 isoform X2"
                     /calculated_mol_wt=81686
     Region          <62..212
                     /region_name="Galactosyl_T"
                     /note="Galactosyltransferase; cl21608"
                     /db_xref="CDD:473923"
     Region          142..681
                     /region_name="CHGN"
                     /note="Chondroitin N-acetylgalactosaminyltransferase;
                     pfam05679"
                     /db_xref="CDD:461712"
     CDS             1..706
                     /gene="CHSY1"
                     /coded_by="XM_061158557.1:102..2222"
                     /db_xref="GeneID:133067725"
ORIGIN      
        1 mfpkefehvl rtwsktipgk veffssegsd tsisipvvpl rgvddsyppq kksfmmlkym
       61 hdhyldkyew fmradddvyi kgdrlesflr slnsseplfl gqtglgttee mgklalepge
      121 nfcmggpgvi msrevlrrmv phigkclrem ytthedvevg rcvrrfagvq cvwsyemqql
      181 fyenyeqnkk gyirdlhnsk ihraitlhpn knppyqyrlh symlsrkiae lrhrtiqlhr
      241 eivlmskysn tevhkedlql gippsfmrfq prqreeilew efltgkylys aadsqpprrg
      301 mdsaqreald divmqvmemi nanaktrgri idfkeiqygy rrvnpmygae yildllllyk
      361 khkgkkmtvp vrrhaylqqt fskiqfvehe eldakelank inqesgslsf lsnslkklvp
      421 fqlpgskneh kepkekkini liplsgrfdm fvrfmgnfek tclipnqnvk lvvllfnsds
      481 npdkakqvel mrdyrikypk admqilpvsg efsralalev gssqfnnesl lffcdvdlvf
      541 taeflqrcra ntvlgqqiyf piifsqydpk ivysgkvpsd nhfaftqktg fwrnygfgit
      601 ciykgdlvrv ggfdvsiqgw gledvdlfnk vvqaglktfr sqevgvvhvh hpvfcdpnld
      661 pkqykmclgs kastygstqq laemwleknd pnyskssnnn gsvrta
//
LOCUS       XP_061014541            2000 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat serine/threonine-protein kinase 1 isoform X1
            [Dama dama].
ACCESSION   XP_061014541
VERSION     XP_061014541.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158558.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2000
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2000
                     /product="leucine-rich repeat serine/threonine-protein
                     kinase 1 isoform X1"
                     /calculated_mol_wt=222905
     Region          59..>219
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          92..120
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(127,130..132,134..135,139,142,144,146,148,159..160,
                     163..165,167..168,172,176,185,187,189,200..201,204..206,
                     208..209,213,216)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          146..185
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          187..219
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <265..>518
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          282..304
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          305..331
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          332..382
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          355..378
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          383..406
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          407..452
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          446..>615
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          453..475
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          476..499
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          500..550
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          551..573
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          640..820
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            646..653
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206648"
     Site            order(648..654,703,758..759,761,806..808)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206648"
     Site            671
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            675..677
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            700..703
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            order(702..703,719..720)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     Site            758..761
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            806..808
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     Region          845..1037
                     /region_name="COR"
                     /note="C-terminal of Roc, COR, domain; pfam16095"
                     /db_xref="CDD:406489"
     Region          1249..1524
                     /region_name="STKc_LRRK1"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Leucine-Rich Repeat Kinase 1; cd14067"
                     /db_xref="CDD:270969"
     Site            order(1249..1253,1257,1269,1271,1321,1335..1338,1342,1344,
                     1387,1389,1391..1392,1394,1410,1413,1427..1430)
                     /site_type="active"
                     /db_xref="CDD:270969"
     Site            order(1249..1253,1257,1269,1271,1321,1335..1338,1342,1387,
                     1389,1391..1392,1394,1410)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270969"
     Site            order(1253,1342,1344,1387,1389,1391,1413,1427..1430)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270969"
     Site            1409..1430
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270969"
     CDS             1..2000
                     /gene="LRRK1"
                     /coded_by="XM_061158558.1:596..6598"
                     /db_xref="GeneID:133067726"
ORIGIN      
        1 magmsrlpps mywcvgpags avcpgramet qdngagdmgs klsvpgsept vqgprtegih
       61 aayrrgdisr aqhllreacd estsqlekgq llsisaaygd letvryllte rlvelptept
      121 ddnpavvaaq fghtdvvqel leslpgscsp qrllnwmlal acqqghlavv kllvlrhgad
      181 pescavrkne fpvivrlply aaiksgnedi aiflirhgaf fcsyilldsp dpskhllrky
      241 fveasalpss cpgkmalrvk wshlklpwvd ldwlidiscq iteldlsanc laslpsvvpw
      301 glinlrklnl sdnhlgelps vqssdeiics rlleidissn klshlppgfl hlsklqklta
      361 sknyleklfe eesatnwigl rklqeldvsd nkltelpalf lhsfkslncl nasrnnlral
      421 pdawacplkc ckasknales lpdkmavfwk nhlkdvdfse nalkevplgl fqldalmslk
      481 lqgnqlvalp ppekwtcrql kaldlsrnhf gknedvlktk risffttrgr qrsgteavcv
      541 lefpaflses levlclndnh ldavppsvcl lkglselylg nnpslrelpp elgqlgnlwq
      601 ldiedlnign vpaeirkegp kamlsylraq lrkaekckqm kmiivgpprq gkstlleilq
      661 tgrapqvvhs eatirttkwe lqrpagsrak vesveftvwd iggpasmatv nqcfftdkal
      721 yvvvwnlalg eeavaslqfw llnieakapn avvlvvgthl dlietkfrve riatlrayvl
      781 alcrspsgsr atgfpditck hlhelscksl egqeglrqli fqvtcnmkdv gstigcqrla
      841 grliprsyls lqeavlaeqq rrslsddvqy ltdrqleqlv dqmpgsdird yedlqsaisf
      901 lietgsllhf pdtshglrnl yfldpiwlse ylqrifnikg srsvakngvi raedlrllll
      961 gtgftkqtee qyfqflakfe ialpvandsy llphllpskp gldthgmrhp tantiqrvfk
     1021 msfvpvgfwq rfiarmlisl aemdlqlfen rkntksrhrk vtiysftgnq rnrcstfrvk
     1081 rnqtiywqeg llvtfdggyl svessdvnwk kkksggikim cqseirdfsa mafitdhvns
     1141 lidqwfpalt atesdgtplm eqyvpcpvce aswaqhsnps ersedvqyfd medcvltaie
     1201 rdfiscprhp dlpvplqelv pelfmtdfpa rlflenskle hsedesavlg qggsgtviyr
     1261 aryqgqpvav krfqikkfkn fanapadtml rhlratdamr nfsefrqeas mlhalqhpci
     1321 vsligisvhp lcfalelapl gslntvlsen ardssfmplg hmltqkiayq iasglaylhk
     1381 kniifcdlks dnilvwsldi kehiniklsd ygisrqsfhe galgvegtpg yqapeirpri
     1441 vydekvdmfs ygmvlyells gqrpalgqhq lqiakklskg irpvlgqpee vqfhrlqalm
     1501 mecwdtkpek rplalavvsq mkdptfatfm yqlpcgkqts ffssqgqeym vvfwegkees
     1561 rnytvvntek gllevqhmsc agmklscqlk iqnslwtate dqkiyiyslk gmcplntpqr
     1621 aldtpaivtc flavpiikkn sylvlaglad glvavfpaaw gapdpgcsyl cshtanrakf
     1681 sipdedarqn pypvtamevv nsgsevwysn gpgllvidca aleirrrlep ytapsvvtsv
     1741 vcgsecrgee vvwclddran clvmyhsaty qlcaryfcgd psptgdvfpv rpmgppplds
     1801 pvasprepar gsiadvsfmf seelgtqilt hqdsltdycs lsslpcspas ssslpfsadc
     1861 edtsqlpepa tgsdrsahdl spvdgeafsq hlqavkilav kdviwvprrg gdiiviglek
     1921 eagtqrgrvi avlkareltp hgvltdaavv akdtvvcgfe nenlewclav wrgwgtqefd
     1981 ifyqsyeelg rleacvrkrr
//
LOCUS       XP_061014542            2000 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat serine/threonine-protein kinase 1 isoform X1
            [Dama dama].
ACCESSION   XP_061014542
VERSION     XP_061014542.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158559.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2000
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2000
                     /product="leucine-rich repeat serine/threonine-protein
                     kinase 1 isoform X1"
                     /calculated_mol_wt=222905
     Region          59..>219
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          92..120
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(127,130..132,134..135,139,142,144,146,148,159..160,
                     163..165,167..168,172,176,185,187,189,200..201,204..206,
                     208..209,213,216)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          146..185
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          187..219
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <265..>518
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          282..304
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          305..331
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          332..382
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          355..378
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          383..406
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          407..452
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          446..>615
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          453..475
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          476..499
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          500..550
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          551..573
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          640..820
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            646..653
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206648"
     Site            order(648..654,703,758..759,761,806..808)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206648"
     Site            671
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            675..677
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            700..703
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            order(702..703,719..720)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     Site            758..761
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            806..808
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     Region          845..1037
                     /region_name="COR"
                     /note="C-terminal of Roc, COR, domain; pfam16095"
                     /db_xref="CDD:406489"
     Region          1249..1524
                     /region_name="STKc_LRRK1"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Leucine-Rich Repeat Kinase 1; cd14067"
                     /db_xref="CDD:270969"
     Site            order(1249..1253,1257,1269,1271,1321,1335..1338,1342,1344,
                     1387,1389,1391..1392,1394,1410,1413,1427..1430)
                     /site_type="active"
                     /db_xref="CDD:270969"
     Site            order(1249..1253,1257,1269,1271,1321,1335..1338,1342,1387,
                     1389,1391..1392,1394,1410)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270969"
     Site            order(1253,1342,1344,1387,1389,1391,1413,1427..1430)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270969"
     Site            1409..1430
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270969"
     CDS             1..2000
                     /gene="LRRK1"
                     /coded_by="XM_061158559.1:347..6349"
                     /db_xref="GeneID:133067726"
ORIGIN      
        1 magmsrlpps mywcvgpags avcpgramet qdngagdmgs klsvpgsept vqgprtegih
       61 aayrrgdisr aqhllreacd estsqlekgq llsisaaygd letvryllte rlvelptept
      121 ddnpavvaaq fghtdvvqel leslpgscsp qrllnwmlal acqqghlavv kllvlrhgad
      181 pescavrkne fpvivrlply aaiksgnedi aiflirhgaf fcsyilldsp dpskhllrky
      241 fveasalpss cpgkmalrvk wshlklpwvd ldwlidiscq iteldlsanc laslpsvvpw
      301 glinlrklnl sdnhlgelps vqssdeiics rlleidissn klshlppgfl hlsklqklta
      361 sknyleklfe eesatnwigl rklqeldvsd nkltelpalf lhsfkslncl nasrnnlral
      421 pdawacplkc ckasknales lpdkmavfwk nhlkdvdfse nalkevplgl fqldalmslk
      481 lqgnqlvalp ppekwtcrql kaldlsrnhf gknedvlktk risffttrgr qrsgteavcv
      541 lefpaflses levlclndnh ldavppsvcl lkglselylg nnpslrelpp elgqlgnlwq
      601 ldiedlnign vpaeirkegp kamlsylraq lrkaekckqm kmiivgpprq gkstlleilq
      661 tgrapqvvhs eatirttkwe lqrpagsrak vesveftvwd iggpasmatv nqcfftdkal
      721 yvvvwnlalg eeavaslqfw llnieakapn avvlvvgthl dlietkfrve riatlrayvl
      781 alcrspsgsr atgfpditck hlhelscksl egqeglrqli fqvtcnmkdv gstigcqrla
      841 grliprsyls lqeavlaeqq rrslsddvqy ltdrqleqlv dqmpgsdird yedlqsaisf
      901 lietgsllhf pdtshglrnl yfldpiwlse ylqrifnikg srsvakngvi raedlrllll
      961 gtgftkqtee qyfqflakfe ialpvandsy llphllpskp gldthgmrhp tantiqrvfk
     1021 msfvpvgfwq rfiarmlisl aemdlqlfen rkntksrhrk vtiysftgnq rnrcstfrvk
     1081 rnqtiywqeg llvtfdggyl svessdvnwk kkksggikim cqseirdfsa mafitdhvns
     1141 lidqwfpalt atesdgtplm eqyvpcpvce aswaqhsnps ersedvqyfd medcvltaie
     1201 rdfiscprhp dlpvplqelv pelfmtdfpa rlflenskle hsedesavlg qggsgtviyr
     1261 aryqgqpvav krfqikkfkn fanapadtml rhlratdamr nfsefrqeas mlhalqhpci
     1321 vsligisvhp lcfalelapl gslntvlsen ardssfmplg hmltqkiayq iasglaylhk
     1381 kniifcdlks dnilvwsldi kehiniklsd ygisrqsfhe galgvegtpg yqapeirpri
     1441 vydekvdmfs ygmvlyells gqrpalgqhq lqiakklskg irpvlgqpee vqfhrlqalm
     1501 mecwdtkpek rplalavvsq mkdptfatfm yqlpcgkqts ffssqgqeym vvfwegkees
     1561 rnytvvntek gllevqhmsc agmklscqlk iqnslwtate dqkiyiyslk gmcplntpqr
     1621 aldtpaivtc flavpiikkn sylvlaglad glvavfpaaw gapdpgcsyl cshtanrakf
     1681 sipdedarqn pypvtamevv nsgsevwysn gpgllvidca aleirrrlep ytapsvvtsv
     1741 vcgsecrgee vvwclddran clvmyhsaty qlcaryfcgd psptgdvfpv rpmgppplds
     1801 pvasprepar gsiadvsfmf seelgtqilt hqdsltdycs lsslpcspas ssslpfsadc
     1861 edtsqlpepa tgsdrsahdl spvdgeafsq hlqavkilav kdviwvprrg gdiiviglek
     1921 eagtqrgrvi avlkareltp hgvltdaavv akdtvvcgfe nenlewclav wrgwgtqefd
     1981 ifyqsyeelg rleacvrkrr
//
LOCUS       XP_061014543            2000 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat serine/threonine-protein kinase 1 isoform X1
            [Dama dama].
ACCESSION   XP_061014543
VERSION     XP_061014543.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158560.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2000
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2000
                     /product="leucine-rich repeat serine/threonine-protein
                     kinase 1 isoform X1"
                     /calculated_mol_wt=222905
     Region          59..>219
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          92..120
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(127,130..132,134..135,139,142,144,146,148,159..160,
                     163..165,167..168,172,176,185,187,189,200..201,204..206,
                     208..209,213,216)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          146..185
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          187..219
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <265..>518
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          282..304
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          305..331
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          332..382
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          355..378
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          383..406
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          407..452
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          446..>615
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          453..475
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          476..499
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          500..550
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          551..573
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          640..820
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            646..653
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206648"
     Site            order(648..654,703,758..759,761,806..808)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206648"
     Site            671
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            675..677
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            700..703
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            order(702..703,719..720)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     Site            758..761
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            806..808
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     Region          845..1037
                     /region_name="COR"
                     /note="C-terminal of Roc, COR, domain; pfam16095"
                     /db_xref="CDD:406489"
     Region          1249..1524
                     /region_name="STKc_LRRK1"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Leucine-Rich Repeat Kinase 1; cd14067"
                     /db_xref="CDD:270969"
     Site            order(1249..1253,1257,1269,1271,1321,1335..1338,1342,1344,
                     1387,1389,1391..1392,1394,1410,1413,1427..1430)
                     /site_type="active"
                     /db_xref="CDD:270969"
     Site            order(1249..1253,1257,1269,1271,1321,1335..1338,1342,1387,
                     1389,1391..1392,1394,1410)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270969"
     Site            order(1253,1342,1344,1387,1389,1391,1413,1427..1430)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270969"
     Site            1409..1430
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270969"
     CDS             1..2000
                     /gene="LRRK1"
                     /coded_by="XM_061158560.1:288..6290"
                     /db_xref="GeneID:133067726"
ORIGIN      
        1 magmsrlpps mywcvgpags avcpgramet qdngagdmgs klsvpgsept vqgprtegih
       61 aayrrgdisr aqhllreacd estsqlekgq llsisaaygd letvryllte rlvelptept
      121 ddnpavvaaq fghtdvvqel leslpgscsp qrllnwmlal acqqghlavv kllvlrhgad
      181 pescavrkne fpvivrlply aaiksgnedi aiflirhgaf fcsyilldsp dpskhllrky
      241 fveasalpss cpgkmalrvk wshlklpwvd ldwlidiscq iteldlsanc laslpsvvpw
      301 glinlrklnl sdnhlgelps vqssdeiics rlleidissn klshlppgfl hlsklqklta
      361 sknyleklfe eesatnwigl rklqeldvsd nkltelpalf lhsfkslncl nasrnnlral
      421 pdawacplkc ckasknales lpdkmavfwk nhlkdvdfse nalkevplgl fqldalmslk
      481 lqgnqlvalp ppekwtcrql kaldlsrnhf gknedvlktk risffttrgr qrsgteavcv
      541 lefpaflses levlclndnh ldavppsvcl lkglselylg nnpslrelpp elgqlgnlwq
      601 ldiedlnign vpaeirkegp kamlsylraq lrkaekckqm kmiivgpprq gkstlleilq
      661 tgrapqvvhs eatirttkwe lqrpagsrak vesveftvwd iggpasmatv nqcfftdkal
      721 yvvvwnlalg eeavaslqfw llnieakapn avvlvvgthl dlietkfrve riatlrayvl
      781 alcrspsgsr atgfpditck hlhelscksl egqeglrqli fqvtcnmkdv gstigcqrla
      841 grliprsyls lqeavlaeqq rrslsddvqy ltdrqleqlv dqmpgsdird yedlqsaisf
      901 lietgsllhf pdtshglrnl yfldpiwlse ylqrifnikg srsvakngvi raedlrllll
      961 gtgftkqtee qyfqflakfe ialpvandsy llphllpskp gldthgmrhp tantiqrvfk
     1021 msfvpvgfwq rfiarmlisl aemdlqlfen rkntksrhrk vtiysftgnq rnrcstfrvk
     1081 rnqtiywqeg llvtfdggyl svessdvnwk kkksggikim cqseirdfsa mafitdhvns
     1141 lidqwfpalt atesdgtplm eqyvpcpvce aswaqhsnps ersedvqyfd medcvltaie
     1201 rdfiscprhp dlpvplqelv pelfmtdfpa rlflenskle hsedesavlg qggsgtviyr
     1261 aryqgqpvav krfqikkfkn fanapadtml rhlratdamr nfsefrqeas mlhalqhpci
     1321 vsligisvhp lcfalelapl gslntvlsen ardssfmplg hmltqkiayq iasglaylhk
     1381 kniifcdlks dnilvwsldi kehiniklsd ygisrqsfhe galgvegtpg yqapeirpri
     1441 vydekvdmfs ygmvlyells gqrpalgqhq lqiakklskg irpvlgqpee vqfhrlqalm
     1501 mecwdtkpek rplalavvsq mkdptfatfm yqlpcgkqts ffssqgqeym vvfwegkees
     1561 rnytvvntek gllevqhmsc agmklscqlk iqnslwtate dqkiyiyslk gmcplntpqr
     1621 aldtpaivtc flavpiikkn sylvlaglad glvavfpaaw gapdpgcsyl cshtanrakf
     1681 sipdedarqn pypvtamevv nsgsevwysn gpgllvidca aleirrrlep ytapsvvtsv
     1741 vcgsecrgee vvwclddran clvmyhsaty qlcaryfcgd psptgdvfpv rpmgppplds
     1801 pvasprepar gsiadvsfmf seelgtqilt hqdsltdycs lsslpcspas ssslpfsadc
     1861 edtsqlpepa tgsdrsahdl spvdgeafsq hlqavkilav kdviwvprrg gdiiviglek
     1921 eagtqrgrvi avlkareltp hgvltdaavv akdtvvcgfe nenlewclav wrgwgtqefd
     1981 ifyqsyeelg rleacvrkrr
//
LOCUS       XP_061014544            2000 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat serine/threonine-protein kinase 1 isoform X1
            [Dama dama].
ACCESSION   XP_061014544
VERSION     XP_061014544.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158561.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2000
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2000
                     /product="leucine-rich repeat serine/threonine-protein
                     kinase 1 isoform X1"
                     /calculated_mol_wt=222905
     Region          59..>219
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          92..120
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(127,130..132,134..135,139,142,144,146,148,159..160,
                     163..165,167..168,172,176,185,187,189,200..201,204..206,
                     208..209,213,216)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          146..185
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          187..219
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <265..>518
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          282..304
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          305..331
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          332..382
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          355..378
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          383..406
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          407..452
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          446..>615
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          453..475
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          476..499
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          500..550
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          551..573
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          640..820
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            646..653
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206648"
     Site            order(648..654,703,758..759,761,806..808)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206648"
     Site            671
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            675..677
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            700..703
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            order(702..703,719..720)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     Site            758..761
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            806..808
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     Region          845..1037
                     /region_name="COR"
                     /note="C-terminal of Roc, COR, domain; pfam16095"
                     /db_xref="CDD:406489"
     Region          1249..1524
                     /region_name="STKc_LRRK1"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Leucine-Rich Repeat Kinase 1; cd14067"
                     /db_xref="CDD:270969"
     Site            order(1249..1253,1257,1269,1271,1321,1335..1338,1342,1344,
                     1387,1389,1391..1392,1394,1410,1413,1427..1430)
                     /site_type="active"
                     /db_xref="CDD:270969"
     Site            order(1249..1253,1257,1269,1271,1321,1335..1338,1342,1387,
                     1389,1391..1392,1394,1410)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270969"
     Site            order(1253,1342,1344,1387,1389,1391,1413,1427..1430)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270969"
     Site            1409..1430
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270969"
     CDS             1..2000
                     /gene="LRRK1"
                     /coded_by="XM_061158561.1:210..6212"
                     /db_xref="GeneID:133067726"
ORIGIN      
        1 magmsrlpps mywcvgpags avcpgramet qdngagdmgs klsvpgsept vqgprtegih
       61 aayrrgdisr aqhllreacd estsqlekgq llsisaaygd letvryllte rlvelptept
      121 ddnpavvaaq fghtdvvqel leslpgscsp qrllnwmlal acqqghlavv kllvlrhgad
      181 pescavrkne fpvivrlply aaiksgnedi aiflirhgaf fcsyilldsp dpskhllrky
      241 fveasalpss cpgkmalrvk wshlklpwvd ldwlidiscq iteldlsanc laslpsvvpw
      301 glinlrklnl sdnhlgelps vqssdeiics rlleidissn klshlppgfl hlsklqklta
      361 sknyleklfe eesatnwigl rklqeldvsd nkltelpalf lhsfkslncl nasrnnlral
      421 pdawacplkc ckasknales lpdkmavfwk nhlkdvdfse nalkevplgl fqldalmslk
      481 lqgnqlvalp ppekwtcrql kaldlsrnhf gknedvlktk risffttrgr qrsgteavcv
      541 lefpaflses levlclndnh ldavppsvcl lkglselylg nnpslrelpp elgqlgnlwq
      601 ldiedlnign vpaeirkegp kamlsylraq lrkaekckqm kmiivgpprq gkstlleilq
      661 tgrapqvvhs eatirttkwe lqrpagsrak vesveftvwd iggpasmatv nqcfftdkal
      721 yvvvwnlalg eeavaslqfw llnieakapn avvlvvgthl dlietkfrve riatlrayvl
      781 alcrspsgsr atgfpditck hlhelscksl egqeglrqli fqvtcnmkdv gstigcqrla
      841 grliprsyls lqeavlaeqq rrslsddvqy ltdrqleqlv dqmpgsdird yedlqsaisf
      901 lietgsllhf pdtshglrnl yfldpiwlse ylqrifnikg srsvakngvi raedlrllll
      961 gtgftkqtee qyfqflakfe ialpvandsy llphllpskp gldthgmrhp tantiqrvfk
     1021 msfvpvgfwq rfiarmlisl aemdlqlfen rkntksrhrk vtiysftgnq rnrcstfrvk
     1081 rnqtiywqeg llvtfdggyl svessdvnwk kkksggikim cqseirdfsa mafitdhvns
     1141 lidqwfpalt atesdgtplm eqyvpcpvce aswaqhsnps ersedvqyfd medcvltaie
     1201 rdfiscprhp dlpvplqelv pelfmtdfpa rlflenskle hsedesavlg qggsgtviyr
     1261 aryqgqpvav krfqikkfkn fanapadtml rhlratdamr nfsefrqeas mlhalqhpci
     1321 vsligisvhp lcfalelapl gslntvlsen ardssfmplg hmltqkiayq iasglaylhk
     1381 kniifcdlks dnilvwsldi kehiniklsd ygisrqsfhe galgvegtpg yqapeirpri
     1441 vydekvdmfs ygmvlyells gqrpalgqhq lqiakklskg irpvlgqpee vqfhrlqalm
     1501 mecwdtkpek rplalavvsq mkdptfatfm yqlpcgkqts ffssqgqeym vvfwegkees
     1561 rnytvvntek gllevqhmsc agmklscqlk iqnslwtate dqkiyiyslk gmcplntpqr
     1621 aldtpaivtc flavpiikkn sylvlaglad glvavfpaaw gapdpgcsyl cshtanrakf
     1681 sipdedarqn pypvtamevv nsgsevwysn gpgllvidca aleirrrlep ytapsvvtsv
     1741 vcgsecrgee vvwclddran clvmyhsaty qlcaryfcgd psptgdvfpv rpmgppplds
     1801 pvasprepar gsiadvsfmf seelgtqilt hqdsltdycs lsslpcspas ssslpfsadc
     1861 edtsqlpepa tgsdrsahdl spvdgeafsq hlqavkilav kdviwvprrg gdiiviglek
     1921 eagtqrgrvi avlkareltp hgvltdaavv akdtvvcgfe nenlewclav wrgwgtqefd
     1981 ifyqsyeelg rleacvrkrr
//
LOCUS       XP_061014545            2000 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat serine/threonine-protein kinase 1 isoform X1
            [Dama dama].
ACCESSION   XP_061014545
VERSION     XP_061014545.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158562.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2000
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2000
                     /product="leucine-rich repeat serine/threonine-protein
                     kinase 1 isoform X1"
                     /calculated_mol_wt=222905
     Region          59..>219
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          92..120
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(127,130..132,134..135,139,142,144,146,148,159..160,
                     163..165,167..168,172,176,185,187,189,200..201,204..206,
                     208..209,213,216)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          146..185
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          187..219
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <265..>518
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          282..304
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          305..331
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          332..382
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          355..378
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          383..406
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          407..452
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          446..>615
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          453..475
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          476..499
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          500..550
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          551..573
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          640..820
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            646..653
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206648"
     Site            order(648..654,703,758..759,761,806..808)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206648"
     Site            671
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            675..677
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            700..703
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            order(702..703,719..720)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     Site            758..761
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            806..808
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     Region          845..1037
                     /region_name="COR"
                     /note="C-terminal of Roc, COR, domain; pfam16095"
                     /db_xref="CDD:406489"
     Region          1249..1524
                     /region_name="STKc_LRRK1"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Leucine-Rich Repeat Kinase 1; cd14067"
                     /db_xref="CDD:270969"
     Site            order(1249..1253,1257,1269,1271,1321,1335..1338,1342,1344,
                     1387,1389,1391..1392,1394,1410,1413,1427..1430)
                     /site_type="active"
                     /db_xref="CDD:270969"
     Site            order(1249..1253,1257,1269,1271,1321,1335..1338,1342,1387,
                     1389,1391..1392,1394,1410)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270969"
     Site            order(1253,1342,1344,1387,1389,1391,1413,1427..1430)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270969"
     Site            1409..1430
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270969"
     CDS             1..2000
                     /gene="LRRK1"
                     /coded_by="XM_061158562.1:779..6781"
                     /db_xref="GeneID:133067726"
ORIGIN      
        1 magmsrlpps mywcvgpags avcpgramet qdngagdmgs klsvpgsept vqgprtegih
       61 aayrrgdisr aqhllreacd estsqlekgq llsisaaygd letvryllte rlvelptept
      121 ddnpavvaaq fghtdvvqel leslpgscsp qrllnwmlal acqqghlavv kllvlrhgad
      181 pescavrkne fpvivrlply aaiksgnedi aiflirhgaf fcsyilldsp dpskhllrky
      241 fveasalpss cpgkmalrvk wshlklpwvd ldwlidiscq iteldlsanc laslpsvvpw
      301 glinlrklnl sdnhlgelps vqssdeiics rlleidissn klshlppgfl hlsklqklta
      361 sknyleklfe eesatnwigl rklqeldvsd nkltelpalf lhsfkslncl nasrnnlral
      421 pdawacplkc ckasknales lpdkmavfwk nhlkdvdfse nalkevplgl fqldalmslk
      481 lqgnqlvalp ppekwtcrql kaldlsrnhf gknedvlktk risffttrgr qrsgteavcv
      541 lefpaflses levlclndnh ldavppsvcl lkglselylg nnpslrelpp elgqlgnlwq
      601 ldiedlnign vpaeirkegp kamlsylraq lrkaekckqm kmiivgpprq gkstlleilq
      661 tgrapqvvhs eatirttkwe lqrpagsrak vesveftvwd iggpasmatv nqcfftdkal
      721 yvvvwnlalg eeavaslqfw llnieakapn avvlvvgthl dlietkfrve riatlrayvl
      781 alcrspsgsr atgfpditck hlhelscksl egqeglrqli fqvtcnmkdv gstigcqrla
      841 grliprsyls lqeavlaeqq rrslsddvqy ltdrqleqlv dqmpgsdird yedlqsaisf
      901 lietgsllhf pdtshglrnl yfldpiwlse ylqrifnikg srsvakngvi raedlrllll
      961 gtgftkqtee qyfqflakfe ialpvandsy llphllpskp gldthgmrhp tantiqrvfk
     1021 msfvpvgfwq rfiarmlisl aemdlqlfen rkntksrhrk vtiysftgnq rnrcstfrvk
     1081 rnqtiywqeg llvtfdggyl svessdvnwk kkksggikim cqseirdfsa mafitdhvns
     1141 lidqwfpalt atesdgtplm eqyvpcpvce aswaqhsnps ersedvqyfd medcvltaie
     1201 rdfiscprhp dlpvplqelv pelfmtdfpa rlflenskle hsedesavlg qggsgtviyr
     1261 aryqgqpvav krfqikkfkn fanapadtml rhlratdamr nfsefrqeas mlhalqhpci
     1321 vsligisvhp lcfalelapl gslntvlsen ardssfmplg hmltqkiayq iasglaylhk
     1381 kniifcdlks dnilvwsldi kehiniklsd ygisrqsfhe galgvegtpg yqapeirpri
     1441 vydekvdmfs ygmvlyells gqrpalgqhq lqiakklskg irpvlgqpee vqfhrlqalm
     1501 mecwdtkpek rplalavvsq mkdptfatfm yqlpcgkqts ffssqgqeym vvfwegkees
     1561 rnytvvntek gllevqhmsc agmklscqlk iqnslwtate dqkiyiyslk gmcplntpqr
     1621 aldtpaivtc flavpiikkn sylvlaglad glvavfpaaw gapdpgcsyl cshtanrakf
     1681 sipdedarqn pypvtamevv nsgsevwysn gpgllvidca aleirrrlep ytapsvvtsv
     1741 vcgsecrgee vvwclddran clvmyhsaty qlcaryfcgd psptgdvfpv rpmgppplds
     1801 pvasprepar gsiadvsfmf seelgtqilt hqdsltdycs lsslpcspas ssslpfsadc
     1861 edtsqlpepa tgsdrsahdl spvdgeafsq hlqavkilav kdviwvprrg gdiiviglek
     1921 eagtqrgrvi avlkareltp hgvltdaavv akdtvvcgfe nenlewclav wrgwgtqefd
     1981 ifyqsyeelg rleacvrkrr
//
LOCUS       XP_061014546            1963 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat serine/threonine-protein kinase 1 isoform X2
            [Dama dama].
ACCESSION   XP_061014546
VERSION     XP_061014546.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158563.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1963
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1963
                     /product="leucine-rich repeat serine/threonine-protein
                     kinase 1 isoform X2"
                     /calculated_mol_wt=219151
     Region          22..>182
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          55..83
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(90,93..95,97..98,102,105,107,109,111,122..123,
                     126..128,130..131,135,139,148,150,152,163..164,167..169,
                     171..172,176,179)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          109..148
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          150..182
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <228..>481
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          245..267
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          268..294
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          295..345
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          318..341
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          346..369
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          370..415
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          409..>578
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          416..438
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          439..462
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          463..513
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          514..536
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          603..783
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            609..616
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206648"
     Site            order(611..617,666,721..722,724,769..771)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206648"
     Site            634
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            638..640
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            663..666
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            order(665..666,682..683)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     Site            721..724
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            769..771
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     Region          808..1000
                     /region_name="COR"
                     /note="C-terminal of Roc, COR, domain; pfam16095"
                     /db_xref="CDD:406489"
     Region          1212..1487
                     /region_name="STKc_LRRK1"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Leucine-Rich Repeat Kinase 1; cd14067"
                     /db_xref="CDD:270969"
     Site            order(1212..1216,1220,1232,1234,1284,1298..1301,1305,1307,
                     1350,1352,1354..1355,1357,1373,1376,1390..1393)
                     /site_type="active"
                     /db_xref="CDD:270969"
     Site            order(1212..1216,1220,1232,1234,1284,1298..1301,1305,1350,
                     1352,1354..1355,1357,1373)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270969"
     Site            order(1216,1305,1307,1350,1352,1354,1376,1390..1393)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270969"
     Site            1372..1393
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270969"
     CDS             1..1963
                     /gene="LRRK1"
                     /coded_by="XM_061158563.1:508..6399"
                     /db_xref="GeneID:133067726"
ORIGIN      
        1 mgsklsvpgs eptvqgprte gihaayrrgd israqhllre acdestsqle kgqllsisaa
       61 ygdletvryl lterlvelpt eptddnpavv aaqfghtdvv qelleslpgs cspqrllnwm
      121 lalacqqghl avvkllvlrh gadpescavr knefpvivrl plyaaiksgn ediaiflirh
      181 gaffcsyill dspdpskhll rkyfveasal psscpgkmal rvkwshlklp wvdldwlidi
      241 scqiteldls anclaslpsv vpwglinlrk lnlsdnhlge lpsvqssdei icsrlleidi
      301 ssnklshlpp gflhlsklqk ltasknylek lfeeesatnw iglrklqeld vsdnkltelp
      361 alflhsfksl nclnasrnnl ralpdawacp lkcckaskna leslpdkmav fwknhlkdvd
      421 fsenalkevp lglfqldalm slklqgnqlv alpppekwtc rqlkaldlsr nhfgknedvl
      481 ktkrisfftt rgrqrsgtea vcvlefpafl seslevlcln dnhldavpps vcllkglsel
      541 ylgnnpslre lppelgqlgn lwqldiedln ignvpaeirk egpkamlsyl raqlrkaekc
      601 kqmkmiivgp prqgkstlle ilqtgrapqv vhseatirtt kwelqrpags rakvesveft
      661 vwdiggpasm atvnqcfftd kalyvvvwnl algeeavasl qfwllnieak apnavvlvvg
      721 thldlietkf rveriatlra yvlalcrsps gsratgfpdi tckhlhelsc kslegqeglr
      781 qlifqvtcnm kdvgstigcq rlagrliprs ylslqeavla eqqrrslsdd vqyltdrqle
      841 qlvdqmpgsd irdyedlqsa isflietgsl lhfpdtshgl rnlyfldpiw lseylqrifn
      901 ikgsrsvakn gviraedlrl lllgtgftkq teeqyfqfla kfeialpvan dsyllphllp
      961 skpgldthgm rhptantiqr vfkmsfvpvg fwqrfiarml islaemdlql fenrkntksr
     1021 hrkvtiysft gnqrnrcstf rvkrnqtiyw qegllvtfdg gylsvessdv nwkkkksggi
     1081 kimcqseird fsamafitdh vnslidqwfp altatesdgt plmeqyvpcp vceaswaqhs
     1141 npsersedvq yfdmedcvlt aierdfiscp rhpdlpvplq elvpelfmtd fparlflens
     1201 klehsedesa vlgqggsgtv iyraryqgqp vavkrfqikk fknfanapad tmlrhlratd
     1261 amrnfsefrq easmlhalqh pcivsligis vhplcfalel aplgslntvl senardssfm
     1321 plghmltqki ayqiasglay lhkkniifcd lksdnilvws ldikehinik lsdygisrqs
     1381 fhegalgveg tpgyqapeir privydekvd mfsygmvlye llsgqrpalg qhqlqiakkl
     1441 skgirpvlgq peevqfhrlq almmecwdtk pekrplalav vsqmkdptfa tfmyqlpcgk
     1501 qtsffssqgq eymvvfwegk eesrnytvvn tekgllevqh mscagmklsc qlkiqnslwt
     1561 atedqkiyiy slkgmcplnt pqraldtpai vtcflavpii kknsylvlag ladglvavfp
     1621 aawgapdpgc sylcshtanr akfsipdeda rqnpypvtam evvnsgsevw ysngpgllvi
     1681 dcaaleirrr lepytapsvv tsvvcgsecr geevvwcldd ranclvmyhs atyqlcaryf
     1741 cgdpsptgdv fpvrpmgppp ldspvaspre pargsiadvs fmfseelgtq ilthqdsltd
     1801 ycslsslpcs passsslpfs adcedtsqlp epatgsdrsa hdlspvdgea fsqhlqavki
     1861 lavkdviwvp rrggdiivig lekeagtqrg rviavlkare ltphgvltda avvakdtvvc
     1921 gfenenlewc lavwrgwgtq efdifyqsye elgrleacvr krr
//
LOCUS       XP_061014547            1963 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat serine/threonine-protein kinase 1 isoform X2
            [Dama dama].
ACCESSION   XP_061014547
VERSION     XP_061014547.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158564.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1963
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1963
                     /product="leucine-rich repeat serine/threonine-protein
                     kinase 1 isoform X2"
                     /calculated_mol_wt=219151
     Region          22..>182
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          55..83
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(90,93..95,97..98,102,105,107,109,111,122..123,
                     126..128,130..131,135,139,148,150,152,163..164,167..169,
                     171..172,176,179)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          109..148
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          150..182
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <228..>481
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          245..267
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          268..294
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          295..345
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          318..341
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          346..369
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          370..415
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          409..>578
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          416..438
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          439..462
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          463..513
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          514..536
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          603..783
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            609..616
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206648"
     Site            order(611..617,666,721..722,724,769..771)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206648"
     Site            634
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            638..640
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            663..666
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            order(665..666,682..683)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     Site            721..724
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            769..771
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     Region          808..1000
                     /region_name="COR"
                     /note="C-terminal of Roc, COR, domain; pfam16095"
                     /db_xref="CDD:406489"
     Region          1212..1487
                     /region_name="STKc_LRRK1"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Leucine-Rich Repeat Kinase 1; cd14067"
                     /db_xref="CDD:270969"
     Site            order(1212..1216,1220,1232,1234,1284,1298..1301,1305,1307,
                     1350,1352,1354..1355,1357,1373,1376,1390..1393)
                     /site_type="active"
                     /db_xref="CDD:270969"
     Site            order(1212..1216,1220,1232,1234,1284,1298..1301,1305,1350,
                     1352,1354..1355,1357,1373)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270969"
     Site            order(1216,1305,1307,1350,1352,1354,1376,1390..1393)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270969"
     Site            1372..1393
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270969"
     CDS             1..1963
                     /gene="LRRK1"
                     /coded_by="XM_061158564.1:309..6200"
                     /db_xref="GeneID:133067726"
ORIGIN      
        1 mgsklsvpgs eptvqgprte gihaayrrgd israqhllre acdestsqle kgqllsisaa
       61 ygdletvryl lterlvelpt eptddnpavv aaqfghtdvv qelleslpgs cspqrllnwm
      121 lalacqqghl avvkllvlrh gadpescavr knefpvivrl plyaaiksgn ediaiflirh
      181 gaffcsyill dspdpskhll rkyfveasal psscpgkmal rvkwshlklp wvdldwlidi
      241 scqiteldls anclaslpsv vpwglinlrk lnlsdnhlge lpsvqssdei icsrlleidi
      301 ssnklshlpp gflhlsklqk ltasknylek lfeeesatnw iglrklqeld vsdnkltelp
      361 alflhsfksl nclnasrnnl ralpdawacp lkcckaskna leslpdkmav fwknhlkdvd
      421 fsenalkevp lglfqldalm slklqgnqlv alpppekwtc rqlkaldlsr nhfgknedvl
      481 ktkrisfftt rgrqrsgtea vcvlefpafl seslevlcln dnhldavpps vcllkglsel
      541 ylgnnpslre lppelgqlgn lwqldiedln ignvpaeirk egpkamlsyl raqlrkaekc
      601 kqmkmiivgp prqgkstlle ilqtgrapqv vhseatirtt kwelqrpags rakvesveft
      661 vwdiggpasm atvnqcfftd kalyvvvwnl algeeavasl qfwllnieak apnavvlvvg
      721 thldlietkf rveriatlra yvlalcrsps gsratgfpdi tckhlhelsc kslegqeglr
      781 qlifqvtcnm kdvgstigcq rlagrliprs ylslqeavla eqqrrslsdd vqyltdrqle
      841 qlvdqmpgsd irdyedlqsa isflietgsl lhfpdtshgl rnlyfldpiw lseylqrifn
      901 ikgsrsvakn gviraedlrl lllgtgftkq teeqyfqfla kfeialpvan dsyllphllp
      961 skpgldthgm rhptantiqr vfkmsfvpvg fwqrfiarml islaemdlql fenrkntksr
     1021 hrkvtiysft gnqrnrcstf rvkrnqtiyw qegllvtfdg gylsvessdv nwkkkksggi
     1081 kimcqseird fsamafitdh vnslidqwfp altatesdgt plmeqyvpcp vceaswaqhs
     1141 npsersedvq yfdmedcvlt aierdfiscp rhpdlpvplq elvpelfmtd fparlflens
     1201 klehsedesa vlgqggsgtv iyraryqgqp vavkrfqikk fknfanapad tmlrhlratd
     1261 amrnfsefrq easmlhalqh pcivsligis vhplcfalel aplgslntvl senardssfm
     1321 plghmltqki ayqiasglay lhkkniifcd lksdnilvws ldikehinik lsdygisrqs
     1381 fhegalgveg tpgyqapeir privydekvd mfsygmvlye llsgqrpalg qhqlqiakkl
     1441 skgirpvlgq peevqfhrlq almmecwdtk pekrplalav vsqmkdptfa tfmyqlpcgk
     1501 qtsffssqgq eymvvfwegk eesrnytvvn tekgllevqh mscagmklsc qlkiqnslwt
     1561 atedqkiyiy slkgmcplnt pqraldtpai vtcflavpii kknsylvlag ladglvavfp
     1621 aawgapdpgc sylcshtanr akfsipdeda rqnpypvtam evvnsgsevw ysngpgllvi
     1681 dcaaleirrr lepytapsvv tsvvcgsecr geevvwcldd ranclvmyhs atyqlcaryf
     1741 cgdpsptgdv fpvrpmgppp ldspvaspre pargsiadvs fmfseelgtq ilthqdsltd
     1801 ycslsslpcs passsslpfs adcedtsqlp epatgsdrsa hdlspvdgea fsqhlqavki
     1861 lavkdviwvp rrggdiivig lekeagtqrg rviavlkare ltphgvltda avvakdtvvc
     1921 gfenenlewc lavwrgwgtq efdifyqsye elgrleacvr krr
//
LOCUS       XP_061014548             512 aa            linear   MAM 02-DEC-2023
DEFINITION  retinaldehyde dehydrogenase 3 isoform X1 [Dama dama].
ACCESSION   XP_061014548
VERSION     XP_061014548.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158565.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..512
                     /product="retinaldehyde dehydrogenase 3 isoform X1"
                     /calculated_mol_wt=56036
     Region          26..506
                     /region_name="ALDH_F1AB_F2_RALDH1"
                     /note="NAD+-dependent retinal dehydrogenase 1, ALDH
                     families 1A, 1B, and 2-like; cd07141"
                     /db_xref="CDD:143459"
     Site            order(84..85,89,92,94,98,139,142..143,147,149..150,
                     153..157,159..160,163..170,263,266,269..270,273..274,276,
                     281,446,448,455,458,460..467,474..476,479..482,484,487,
                     492,499..504,506)
                     /site_type="other"
                     /note="homotetrameric interface [polypeptide binding]"
                     /db_xref="CDD:143459"
     Site            order(177..180,204,207,237,241..242,255,258,261,281..282,
                     314,361,364,411)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:143459"
     Site            order(181,280,311,314)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143459"
     CDS             1..512
                     /gene="ALDH1A3"
                     /coded_by="XM_061158565.1:82..1620"
                     /db_xref="GeneID:133067727"
ORIGIN      
        1 mattngaven gqpdrkapal prpvrnlevq ftkifinnew nesksgkkfa tynpstleki
       61 ceveegdkpd vdkaveaaqa afqrgspwrr ldapsrgrll qqladlverd railatletm
      121 dtgkpflhaf fidlegcikt lryfagwadk iqgrtiptdd nvvcftrhep vgvcgaitpw
      181 nfpllmlvwk lapalccgnt vvlkpaeqtp ltalylgsli kevgfppgvv nivpgfgptv
      241 gaaisshpqi nkiaftgste vgklvkeaas hsnlkrvtle lggknpcivc adadlslave
      301 cahqgvffnq gqcctaasrv fveeqvydef vrrsveyakk rpvgdpfdvr teqgpqidqk
      361 qfdkildlie sgkkegakle cggsaledrg lfikptvfse vtdtmriake eifgpvqpil
      421 kfknieevik ransleyglt aavftknldk alklasales gtvwincyna iyaqapfggf
      481 kmsgngrelg eyalaeytev ktvtiklddk dp
//
LOCUS       XP_061014549             463 aa            linear   MAM 02-DEC-2023
DEFINITION  retinaldehyde dehydrogenase 3 isoform X2 [Dama dama].
ACCESSION   XP_061014549
VERSION     XP_061014549.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158566.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..463
                     /product="retinaldehyde dehydrogenase 3 isoform X2"
                     /calculated_mol_wt=50565
     Region          26..463
                     /region_name="ALDH-SF"
                     /note="NAD(P)+-dependent aldehyde dehydrogenase
                     superfamily; cl11961"
                     /db_xref="CDD:448367"
     Site            order(177..181,189,204,206..207,255..258,261,264..265,
                     280..282,314,411,413,439)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:143459"
     Site            order(181,280,311,314)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143459"
     CDS             1..463
                     /gene="ALDH1A3"
                     /coded_by="XM_061158566.1:82..1473"
                     /db_xref="GeneID:133067727"
ORIGIN      
        1 mattngaven gqpdrkapal prpvrnlevq ftkifinnew nesksgkkfa tynpstleki
       61 ceveegdkpd vdkaveaaqa afqrgspwrr ldapsrgrll qqladlverd railatletm
      121 dtgkpflhaf fidlegcikt lryfagwadk iqgrtiptdd nvvcftrhep vgvcgaitpw
      181 nfpllmlvwk lapalccgnt vvlkpaeqtp ltalylgsli kevgfppgvv nivpgfgptv
      241 gaaisshpqi nkiaftgste vgklvkeaas hsnlkrvtle lggknpcivc adadlslave
      301 cahqgvffnq gqcctaasrv fveeqvydef vrrsveyakk rpvgdpfdvr teqgpqidqk
      361 qfdkildlie sgkkegakle cggsaledrg lfikptvfse vtdtmriake eifgpvqpil
      421 kfknieevik ransleyglt aavftknldk alklasales gtv
//
LOCUS       XP_061014550             318 aa            linear   MAM 02-DEC-2023
DEFINITION  ankyrin repeat and SOCS box protein 7 isoform X1 [Dama dama].
ACCESSION   XP_061014550
VERSION     XP_061014550.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158567.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..318
                     /product="ankyrin repeat and SOCS box protein 7 isoform
                     X1"
                     /calculated_mol_wt=35880
     Region          16..251
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          46..77
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          81..114
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(82,86..87,90..92,94..95,99,102,114,116,118,122..123,
                     126..128,130..131,135,138,147,149,151,155..156,159..161,
                     163..164,168,171,180)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          116..147
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          149..180
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          213..244
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          273..317
                     /region_name="SOCS_ASB7"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     ASB7-like proteins. ASB family members have a C-terminal
                     SOCS box and an N-terminal ankyrin-related sequence. The
                     general function of the SOCS box is the recruitment of the
                     ubiquitin-transferase system. The...; cd03726"
                     /db_xref="CDD:239696"
     Site            order(274..279,285,295,301,306)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239696"
     CDS             1..318
                     /gene="ASB7"
                     /coded_by="XM_061158567.1:570..1526"
                     /db_xref="GeneID:133067728"
ORIGIN      
        1 mlhhhcrrnp elqeelqiqa avaagdvhtv rkmleqgysp ngrdangwtl lhfsaargke
       61 rcvrvflehg adptvkdlig gftalhyaam hgrariarlm leseyrsdii naksndgwtp
      121 lhvaahygrd sfvrlllefk aevdplsdkg ttplqlaiir ersscvkill dhnanidiqn
      181 gfllryavik snhsycrmfl qrgadtnlgr ledgqtplhl salrddvlca rmlynygadt
      241 ntrnyegqtp lavsisisgs srpcldflqe vtrqprnlqd lcrikirqci glqnlkllde
      301 lpiakvmkdy lkhkfddi
//
LOCUS       XP_061014551             318 aa            linear   MAM 02-DEC-2023
DEFINITION  ankyrin repeat and SOCS box protein 7 isoform X1 [Dama dama].
ACCESSION   XP_061014551
VERSION     XP_061014551.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158568.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..318
                     /product="ankyrin repeat and SOCS box protein 7 isoform
                     X1"
                     /calculated_mol_wt=35880
     Region          16..251
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          46..77
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          81..114
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(82,86..87,90..92,94..95,99,102,114,116,118,122..123,
                     126..128,130..131,135,138,147,149,151,155..156,159..161,
                     163..164,168,171,180)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          116..147
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          149..180
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          213..244
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          273..317
                     /region_name="SOCS_ASB7"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     ASB7-like proteins. ASB family members have a C-terminal
                     SOCS box and an N-terminal ankyrin-related sequence. The
                     general function of the SOCS box is the recruitment of the
                     ubiquitin-transferase system. The...; cd03726"
                     /db_xref="CDD:239696"
     Site            order(274..279,285,295,301,306)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239696"
     CDS             1..318
                     /gene="ASB7"
                     /coded_by="XM_061158568.1:422..1378"
                     /db_xref="GeneID:133067728"
ORIGIN      
        1 mlhhhcrrnp elqeelqiqa avaagdvhtv rkmleqgysp ngrdangwtl lhfsaargke
       61 rcvrvflehg adptvkdlig gftalhyaam hgrariarlm leseyrsdii naksndgwtp
      121 lhvaahygrd sfvrlllefk aevdplsdkg ttplqlaiir ersscvkill dhnanidiqn
      181 gfllryavik snhsycrmfl qrgadtnlgr ledgqtplhl salrddvlca rmlynygadt
      241 ntrnyegqtp lavsisisgs srpcldflqe vtrqprnlqd lcrikirqci glqnlkllde
      301 lpiakvmkdy lkhkfddi
//
LOCUS       XP_061014552             318 aa            linear   MAM 02-DEC-2023
DEFINITION  ankyrin repeat and SOCS box protein 7 isoform X1 [Dama dama].
ACCESSION   XP_061014552
VERSION     XP_061014552.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158569.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..318
                     /product="ankyrin repeat and SOCS box protein 7 isoform
                     X1"
                     /calculated_mol_wt=35880
     Region          16..251
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          46..77
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          81..114
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(82,86..87,90..92,94..95,99,102,114,116,118,122..123,
                     126..128,130..131,135,138,147,149,151,155..156,159..161,
                     163..164,168,171,180)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          116..147
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          149..180
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          213..244
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          273..317
                     /region_name="SOCS_ASB7"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     ASB7-like proteins. ASB family members have a C-terminal
                     SOCS box and an N-terminal ankyrin-related sequence. The
                     general function of the SOCS box is the recruitment of the
                     ubiquitin-transferase system. The...; cd03726"
                     /db_xref="CDD:239696"
     Site            order(274..279,285,295,301,306)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239696"
     CDS             1..318
                     /gene="ASB7"
                     /coded_by="XM_061158569.1:560..1516"
                     /db_xref="GeneID:133067728"
ORIGIN      
        1 mlhhhcrrnp elqeelqiqa avaagdvhtv rkmleqgysp ngrdangwtl lhfsaargke
       61 rcvrvflehg adptvkdlig gftalhyaam hgrariarlm leseyrsdii naksndgwtp
      121 lhvaahygrd sfvrlllefk aevdplsdkg ttplqlaiir ersscvkill dhnanidiqn
      181 gfllryavik snhsycrmfl qrgadtnlgr ledgqtplhl salrddvlca rmlynygadt
      241 ntrnyegqtp lavsisisgs srpcldflqe vtrqprnlqd lcrikirqci glqnlkllde
      301 lpiakvmkdy lkhkfddi
//
LOCUS       XP_061014553             318 aa            linear   MAM 02-DEC-2023
DEFINITION  ankyrin repeat and SOCS box protein 7 isoform X1 [Dama dama].
ACCESSION   XP_061014553
VERSION     XP_061014553.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158570.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..318
                     /product="ankyrin repeat and SOCS box protein 7 isoform
                     X1"
                     /calculated_mol_wt=35880
     Region          16..251
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          46..77
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          81..114
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(82,86..87,90..92,94..95,99,102,114,116,118,122..123,
                     126..128,130..131,135,138,147,149,151,155..156,159..161,
                     163..164,168,171,180)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          116..147
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          149..180
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          213..244
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          273..317
                     /region_name="SOCS_ASB7"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     ASB7-like proteins. ASB family members have a C-terminal
                     SOCS box and an N-terminal ankyrin-related sequence. The
                     general function of the SOCS box is the recruitment of the
                     ubiquitin-transferase system. The...; cd03726"
                     /db_xref="CDD:239696"
     Site            order(274..279,285,295,301,306)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239696"
     CDS             1..318
                     /gene="ASB7"
                     /coded_by="XM_061158570.1:198..1154"
                     /db_xref="GeneID:133067728"
ORIGIN      
        1 mlhhhcrrnp elqeelqiqa avaagdvhtv rkmleqgysp ngrdangwtl lhfsaargke
       61 rcvrvflehg adptvkdlig gftalhyaam hgrariarlm leseyrsdii naksndgwtp
      121 lhvaahygrd sfvrlllefk aevdplsdkg ttplqlaiir ersscvkill dhnanidiqn
      181 gfllryavik snhsycrmfl qrgadtnlgr ledgqtplhl salrddvlca rmlynygadt
      241 ntrnyegqtp lavsisisgs srpcldflqe vtrqprnlqd lcrikirqci glqnlkllde
      301 lpiakvmkdy lkhkfddi
//
LOCUS       XP_061014554             291 aa            linear   MAM 02-DEC-2023
DEFINITION  ankyrin repeat and SOCS box protein 7 isoform X2 [Dama dama].
ACCESSION   XP_061014554
VERSION     XP_061014554.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158571.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..291
                     /product="ankyrin repeat and SOCS box protein 7 isoform
                     X2"
                     /calculated_mol_wt=32450
     Region          16..251
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          46..77
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          81..114
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(82,86..87,90..92,94..95,99,102,114,116,118,122..123,
                     126..128,130..131,135,138,147,149,151,155..156,159..161,
                     163..164,168,171,180)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          116..147
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          149..180
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          213..244
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..291
                     /gene="ASB7"
                     /coded_by="XM_061158571.1:572..1447"
                     /db_xref="GeneID:133067728"
ORIGIN      
        1 mlhhhcrrnp elqeelqiqa avaagdvhtv rkmleqgysp ngrdangwtl lhfsaargke
       61 rcvrvflehg adptvkdlig gftalhyaam hgrariarlm leseyrsdii naksndgwtp
      121 lhvaahygrd sfvrlllefk aevdplsdkg ttplqlaiir ersscvkill dhnanidiqn
      181 gfllryavik snhsycrmfl qrgadtnlgr ledgqtplhl salrddvlca rmlynygadt
      241 ntrnyegqtp lavsisisgs srpcldflqe vtsgvteaqk rdlltqvqpa y
//
LOCUS       XP_061014555             274 aa            linear   MAM 02-DEC-2023
DEFINITION  ankyrin repeat and SOCS box protein 7 isoform X3 [Dama dama].
ACCESSION   XP_061014555
VERSION     XP_061014555.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158572.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..274
                     /product="ankyrin repeat and SOCS box protein 7 isoform
                     X3"
                     /calculated_mol_wt=30582
     Region          16..251
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          46..77
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          81..114
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(82,86..87,90..92,94..95,99,102,114,116,118,122..123,
                     126..128,130..131,135,138,147,149,151,155..156,159..161,
                     163..164,168,171,180)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          116..147
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          149..180
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          213..244
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..274
                     /gene="ASB7"
                     /coded_by="XM_061158572.1:572..1396"
                     /db_xref="GeneID:133067728"
ORIGIN      
        1 mlhhhcrrnp elqeelqiqa avaagdvhtv rkmleqgysp ngrdangwtl lhfsaargke
       61 rcvrvflehg adptvkdlig gftalhyaam hgrariarlm leseyrsdii naksndgwtp
      121 lhvaahygrd sfvrlllefk aevdplsdkg ttplqlaiir ersscvkill dhnanidiqn
      181 gfllryavik snhsycrmfl qrgadtnlgr ledgqtplhl salrddvlca rmlynygadt
      241 ntrnyegqtp lavsisisgs srpcldflqe vtsm
//
LOCUS       XP_061014556             772 aa            linear   MAM 02-DEC-2023
DEFINITION  protein Lines homolog 1 [Dama dama].
ACCESSION   XP_061014556
VERSION     XP_061014556.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158573.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..772
                     /product="protein Lines homolog 1"
                     /calculated_mol_wt=87407
     Region          193..542
                     /region_name="LINES_N"
                     /note="Lines N-terminus; pfam14694"
                     /db_xref="CDD:464266"
     Region          714..750
                     /region_name="LINES_C"
                     /note="Lines C-terminus; pfam14695"
                     /db_xref="CDD:464267"
     CDS             1..772
                     /gene="LINS1"
                     /coded_by="XM_061158573.1:530..2848"
                     /db_xref="GeneID:133067730"
ORIGIN      
        1 mktffevleq lykkvllgat lendshdyvf ylypafsdqd csastspdcs nardvqdkqe
       61 pssvslptls vapvclqrhs qmsntreitl lqltvirvmi trilsvetef hakekyrdii
      121 killkssdie sqltcmfqns ekllshmaak clalilyfql kekitlsnfw isfcqknise
      181 ysesnkvvyc lwiltfvike ifkdtssqkt eilkqfltpf dtlfevfyns lfsqhfenhq
      241 dasklinsli cflellelli asrihlklhf tcqrilflka scvfdvitwp vqafvkrkli
      301 ivikkcllck agedlcrgsv pafvppdnpl hvdllalasa vlqavdlgll rtlsvrgkps
      361 cfgggevlpg yehapgpdhv ilramsllii rsleikfqnc asanemkvdl qrfmsellif
      421 lkphlqpslq shnlcewlsr vfieqdddml eaakallgiy lkltreceat esltqekemw
      481 nhhthengyn phciflfllk nigfdstvll dflissetcf leyfvrylkl lqkdwdnfft
      541 icnyfdvtes kdnihiccci sslvqnrnsn pteasplavl gshtnahswv swasaassep
      601 lnhgvtleka ytkpqancls tpgasqslvd ydssddseeg stslclvnsr ltsshqeamk
      661 ktqdtfgasg dkkelspesq srplvtkesn tpfsvycdva pdntasevgi syrtvkcfee
      721 lqgaiyrlqk knlfpynpta llkllkhiet iynksmtply nndilfpgtv fp
//
LOCUS       XP_061014557             772 aa            linear   MAM 02-DEC-2023
DEFINITION  protein Lines homolog 1 [Dama dama].
ACCESSION   XP_061014557
VERSION     XP_061014557.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158574.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..772
                     /product="protein Lines homolog 1"
                     /calculated_mol_wt=87407
     Region          193..542
                     /region_name="LINES_N"
                     /note="Lines N-terminus; pfam14694"
                     /db_xref="CDD:464266"
     Region          714..750
                     /region_name="LINES_C"
                     /note="Lines C-terminus; pfam14695"
                     /db_xref="CDD:464267"
     CDS             1..772
                     /gene="LINS1"
                     /coded_by="XM_061158574.1:867..3185"
                     /db_xref="GeneID:133067730"
ORIGIN      
        1 mktffevleq lykkvllgat lendshdyvf ylypafsdqd csastspdcs nardvqdkqe
       61 pssvslptls vapvclqrhs qmsntreitl lqltvirvmi trilsvetef hakekyrdii
      121 killkssdie sqltcmfqns ekllshmaak clalilyfql kekitlsnfw isfcqknise
      181 ysesnkvvyc lwiltfvike ifkdtssqkt eilkqfltpf dtlfevfyns lfsqhfenhq
      241 dasklinsli cflellelli asrihlklhf tcqrilflka scvfdvitwp vqafvkrkli
      301 ivikkcllck agedlcrgsv pafvppdnpl hvdllalasa vlqavdlgll rtlsvrgkps
      361 cfgggevlpg yehapgpdhv ilramsllii rsleikfqnc asanemkvdl qrfmsellif
      421 lkphlqpslq shnlcewlsr vfieqdddml eaakallgiy lkltreceat esltqekemw
      481 nhhthengyn phciflfllk nigfdstvll dflissetcf leyfvrylkl lqkdwdnfft
      541 icnyfdvtes kdnihiccci sslvqnrnsn pteasplavl gshtnahswv swasaassep
      601 lnhgvtleka ytkpqancls tpgasqslvd ydssddseeg stslclvnsr ltsshqeamk
      661 ktqdtfgasg dkkelspesq srplvtkesn tpfsvycdva pdntasevgi syrtvkcfee
      721 lqgaiyrlqk knlfpynpta llkllkhiet iynksmtply nndilfpgtv fp
//
LOCUS       XP_061014558             772 aa            linear   MAM 02-DEC-2023
DEFINITION  protein Lines homolog 1 [Dama dama].
ACCESSION   XP_061014558
VERSION     XP_061014558.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158575.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..772
                     /product="protein Lines homolog 1"
                     /calculated_mol_wt=87407
     Region          193..542
                     /region_name="LINES_N"
                     /note="Lines N-terminus; pfam14694"
                     /db_xref="CDD:464266"
     Region          714..750
                     /region_name="LINES_C"
                     /note="Lines C-terminus; pfam14695"
                     /db_xref="CDD:464267"
     CDS             1..772
                     /gene="LINS1"
                     /coded_by="XM_061158575.1:938..3256"
                     /db_xref="GeneID:133067730"
ORIGIN      
        1 mktffevleq lykkvllgat lendshdyvf ylypafsdqd csastspdcs nardvqdkqe
       61 pssvslptls vapvclqrhs qmsntreitl lqltvirvmi trilsvetef hakekyrdii
      121 killkssdie sqltcmfqns ekllshmaak clalilyfql kekitlsnfw isfcqknise
      181 ysesnkvvyc lwiltfvike ifkdtssqkt eilkqfltpf dtlfevfyns lfsqhfenhq
      241 dasklinsli cflellelli asrihlklhf tcqrilflka scvfdvitwp vqafvkrkli
      301 ivikkcllck agedlcrgsv pafvppdnpl hvdllalasa vlqavdlgll rtlsvrgkps
      361 cfgggevlpg yehapgpdhv ilramsllii rsleikfqnc asanemkvdl qrfmsellif
      421 lkphlqpslq shnlcewlsr vfieqdddml eaakallgiy lkltreceat esltqekemw
      481 nhhthengyn phciflfllk nigfdstvll dflissetcf leyfvrylkl lqkdwdnfft
      541 icnyfdvtes kdnihiccci sslvqnrnsn pteasplavl gshtnahswv swasaassep
      601 lnhgvtleka ytkpqancls tpgasqslvd ydssddseeg stslclvnsr ltsshqeamk
      661 ktqdtfgasg dkkelspesq srplvtkesn tpfsvycdva pdntasevgi syrtvkcfee
      721 lqgaiyrlqk knlfpynpta llkllkhiet iynksmtply nndilfpgtv fp
//
LOCUS       XP_061014559             772 aa            linear   MAM 02-DEC-2023
DEFINITION  protein Lines homolog 1 [Dama dama].
ACCESSION   XP_061014559
VERSION     XP_061014559.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158576.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..772
                     /product="protein Lines homolog 1"
                     /calculated_mol_wt=87407
     Region          193..542
                     /region_name="LINES_N"
                     /note="Lines N-terminus; pfam14694"
                     /db_xref="CDD:464266"
     Region          714..750
                     /region_name="LINES_C"
                     /note="Lines C-terminus; pfam14695"
                     /db_xref="CDD:464267"
     CDS             1..772
                     /gene="LINS1"
                     /coded_by="XM_061158576.1:846..3164"
                     /db_xref="GeneID:133067730"
ORIGIN      
        1 mktffevleq lykkvllgat lendshdyvf ylypafsdqd csastspdcs nardvqdkqe
       61 pssvslptls vapvclqrhs qmsntreitl lqltvirvmi trilsvetef hakekyrdii
      121 killkssdie sqltcmfqns ekllshmaak clalilyfql kekitlsnfw isfcqknise
      181 ysesnkvvyc lwiltfvike ifkdtssqkt eilkqfltpf dtlfevfyns lfsqhfenhq
      241 dasklinsli cflellelli asrihlklhf tcqrilflka scvfdvitwp vqafvkrkli
      301 ivikkcllck agedlcrgsv pafvppdnpl hvdllalasa vlqavdlgll rtlsvrgkps
      361 cfgggevlpg yehapgpdhv ilramsllii rsleikfqnc asanemkvdl qrfmsellif
      421 lkphlqpslq shnlcewlsr vfieqdddml eaakallgiy lkltreceat esltqekemw
      481 nhhthengyn phciflfllk nigfdstvll dflissetcf leyfvrylkl lqkdwdnfft
      541 icnyfdvtes kdnihiccci sslvqnrnsn pteasplavl gshtnahswv swasaassep
      601 lnhgvtleka ytkpqancls tpgasqslvd ydssddseeg stslclvnsr ltsshqeamk
      661 ktqdtfgasg dkkelspesq srplvtkesn tpfsvycdva pdntasevgi syrtvkcfee
      721 lqgaiyrlqk knlfpynpta llkllkhiet iynksmtply nndilfpgtv fp
//
LOCUS       XP_061014560             772 aa            linear   MAM 02-DEC-2023
DEFINITION  protein Lines homolog 1 [Dama dama].
ACCESSION   XP_061014560
VERSION     XP_061014560.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158577.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..772
                     /product="protein Lines homolog 1"
                     /calculated_mol_wt=87407
     Region          193..542
                     /region_name="LINES_N"
                     /note="Lines N-terminus; pfam14694"
                     /db_xref="CDD:464266"
     Region          714..750
                     /region_name="LINES_C"
                     /note="Lines C-terminus; pfam14695"
                     /db_xref="CDD:464267"
     CDS             1..772
                     /gene="LINS1"
                     /coded_by="XM_061158577.1:509..2827"
                     /db_xref="GeneID:133067730"
ORIGIN      
        1 mktffevleq lykkvllgat lendshdyvf ylypafsdqd csastspdcs nardvqdkqe
       61 pssvslptls vapvclqrhs qmsntreitl lqltvirvmi trilsvetef hakekyrdii
      121 killkssdie sqltcmfqns ekllshmaak clalilyfql kekitlsnfw isfcqknise
      181 ysesnkvvyc lwiltfvike ifkdtssqkt eilkqfltpf dtlfevfyns lfsqhfenhq
      241 dasklinsli cflellelli asrihlklhf tcqrilflka scvfdvitwp vqafvkrkli
      301 ivikkcllck agedlcrgsv pafvppdnpl hvdllalasa vlqavdlgll rtlsvrgkps
      361 cfgggevlpg yehapgpdhv ilramsllii rsleikfqnc asanemkvdl qrfmsellif
      421 lkphlqpslq shnlcewlsr vfieqdddml eaakallgiy lkltreceat esltqekemw
      481 nhhthengyn phciflfllk nigfdstvll dflissetcf leyfvrylkl lqkdwdnfft
      541 icnyfdvtes kdnihiccci sslvqnrnsn pteasplavl gshtnahswv swasaassep
      601 lnhgvtleka ytkpqancls tpgasqslvd ydssddseeg stslclvnsr ltsshqeamk
      661 ktqdtfgasg dkkelspesq srplvtkesn tpfsvycdva pdntasevgi syrtvkcfee
      721 lqgaiyrlqk knlfpynpta llkllkhiet iynksmtply nndilfpgtv fp
//
LOCUS       XP_061014561             772 aa            linear   MAM 02-DEC-2023
DEFINITION  protein Lines homolog 1 [Dama dama].
ACCESSION   XP_061014561
VERSION     XP_061014561.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158578.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..772
                     /product="protein Lines homolog 1"
                     /calculated_mol_wt=87407
     Region          193..542
                     /region_name="LINES_N"
                     /note="Lines N-terminus; pfam14694"
                     /db_xref="CDD:464266"
     Region          714..750
                     /region_name="LINES_C"
                     /note="Lines C-terminus; pfam14695"
                     /db_xref="CDD:464267"
     CDS             1..772
                     /gene="LINS1"
                     /coded_by="XM_061158578.1:1617..3935"
                     /db_xref="GeneID:133067730"
ORIGIN      
        1 mktffevleq lykkvllgat lendshdyvf ylypafsdqd csastspdcs nardvqdkqe
       61 pssvslptls vapvclqrhs qmsntreitl lqltvirvmi trilsvetef hakekyrdii
      121 killkssdie sqltcmfqns ekllshmaak clalilyfql kekitlsnfw isfcqknise
      181 ysesnkvvyc lwiltfvike ifkdtssqkt eilkqfltpf dtlfevfyns lfsqhfenhq
      241 dasklinsli cflellelli asrihlklhf tcqrilflka scvfdvitwp vqafvkrkli
      301 ivikkcllck agedlcrgsv pafvppdnpl hvdllalasa vlqavdlgll rtlsvrgkps
      361 cfgggevlpg yehapgpdhv ilramsllii rsleikfqnc asanemkvdl qrfmsellif
      421 lkphlqpslq shnlcewlsr vfieqdddml eaakallgiy lkltreceat esltqekemw
      481 nhhthengyn phciflfllk nigfdstvll dflissetcf leyfvrylkl lqkdwdnfft
      541 icnyfdvtes kdnihiccci sslvqnrnsn pteasplavl gshtnahswv swasaassep
      601 lnhgvtleka ytkpqancls tpgasqslvd ydssddseeg stslclvnsr ltsshqeamk
      661 ktqdtfgasg dkkelspesq srplvtkesn tpfsvycdva pdntasevgi syrtvkcfee
      721 lqgaiyrlqk knlfpynpta llkllkhiet iynksmtply nndilfpgtv fp
//
LOCUS       XP_061014562             772 aa            linear   MAM 02-DEC-2023
DEFINITION  protein Lines homolog 1 [Dama dama].
ACCESSION   XP_061014562
VERSION     XP_061014562.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158579.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..772
                     /product="protein Lines homolog 1"
                     /calculated_mol_wt=87407
     Region          193..542
                     /region_name="LINES_N"
                     /note="Lines N-terminus; pfam14694"
                     /db_xref="CDD:464266"
     Region          714..750
                     /region_name="LINES_C"
                     /note="Lines C-terminus; pfam14695"
                     /db_xref="CDD:464267"
     CDS             1..772
                     /gene="LINS1"
                     /coded_by="XM_061158579.1:419..2737"
                     /db_xref="GeneID:133067730"
ORIGIN      
        1 mktffevleq lykkvllgat lendshdyvf ylypafsdqd csastspdcs nardvqdkqe
       61 pssvslptls vapvclqrhs qmsntreitl lqltvirvmi trilsvetef hakekyrdii
      121 killkssdie sqltcmfqns ekllshmaak clalilyfql kekitlsnfw isfcqknise
      181 ysesnkvvyc lwiltfvike ifkdtssqkt eilkqfltpf dtlfevfyns lfsqhfenhq
      241 dasklinsli cflellelli asrihlklhf tcqrilflka scvfdvitwp vqafvkrkli
      301 ivikkcllck agedlcrgsv pafvppdnpl hvdllalasa vlqavdlgll rtlsvrgkps
      361 cfgggevlpg yehapgpdhv ilramsllii rsleikfqnc asanemkvdl qrfmsellif
      421 lkphlqpslq shnlcewlsr vfieqdddml eaakallgiy lkltreceat esltqekemw
      481 nhhthengyn phciflfllk nigfdstvll dflissetcf leyfvrylkl lqkdwdnfft
      541 icnyfdvtes kdnihiccci sslvqnrnsn pteasplavl gshtnahswv swasaassep
      601 lnhgvtleka ytkpqancls tpgasqslvd ydssddseeg stslclvnsr ltsshqeamk
      661 ktqdtfgasg dkkelspesq srplvtkesn tpfsvycdva pdntasevgi syrtvkcfee
      721 lqgaiyrlqk knlfpynpta llkllkhiet iynksmtply nndilfpgtv fp
//
LOCUS       XP_061014563             297 aa            linear   MAM 02-DEC-2023
DEFINITION  lysM and putative peptidoglycan-binding domain-containing protein 4
            [Dama dama].
ACCESSION   XP_061014563
VERSION     XP_061014563.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158580.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..297
                     /product="lysM and putative peptidoglycan-binding
                     domain-containing protein 4"
                     /calculated_mol_wt=32380
     Region          80..118
                     /region_name="LysM"
                     /note="Lysin motif; smart00257"
                     /db_xref="CDD:197609"
     CDS             1..297
                     /gene="LYSMD4"
                     /coded_by="XM_061158580.1:73..966"
                     /db_xref="GeneID:133067731"
ORIGIN      
        1 mrqkevitkt fqgpavvcrt ptshvymfen gvedsedsse eeshrvalrp rgkegqkkga
       61 hhprrsgagd vvllqrelaq gdnlnklalq ygckvadikk vnnfireqdl yalksikipv
      121 knhgilteth kelrpllnss setrvtfeeq pdpdraavna sassssltdf fkgidqnieh
      181 avqseiflse sysietssqp llpappktlt ngadcgiqww navfimllig vvlpvfylvy
      241 fkiqatsetp silnttaipn gstagnavpg qaprlaipmp tipssdsqfs qtthggi
//
LOCUS       XP_061014564             297 aa            linear   MAM 02-DEC-2023
DEFINITION  lysM and putative peptidoglycan-binding domain-containing protein 4
            [Dama dama].
ACCESSION   XP_061014564
VERSION     XP_061014564.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158581.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..297
                     /product="lysM and putative peptidoglycan-binding
                     domain-containing protein 4"
                     /calculated_mol_wt=32380
     Region          80..118
                     /region_name="LysM"
                     /note="Lysin motif; smart00257"
                     /db_xref="CDD:197609"
     CDS             1..297
                     /gene="LYSMD4"
                     /coded_by="XM_061158581.1:148..1041"
                     /db_xref="GeneID:133067731"
ORIGIN      
        1 mrqkevitkt fqgpavvcrt ptshvymfen gvedsedsse eeshrvalrp rgkegqkkga
       61 hhprrsgagd vvllqrelaq gdnlnklalq ygckvadikk vnnfireqdl yalksikipv
      121 knhgilteth kelrpllnss setrvtfeeq pdpdraavna sassssltdf fkgidqnieh
      181 avqseiflse sysietssqp llpappktlt ngadcgiqww navfimllig vvlpvfylvy
      241 fkiqatsetp silnttaipn gstagnavpg qaprlaipmp tipssdsqfs qtthggi
//
LOCUS       XP_061014565             136 aa            linear   MAM 02-DEC-2023
DEFINITION  histone H3.3A [Dama dama].
ACCESSION   XP_061014565
VERSION     XP_061014565.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158582.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..136
                     /product="histone H3.3A"
                     /calculated_mol_wt=15197
     Region          1..136
                     /region_name="PTZ00018"
                     /note="histone H3; Provisional"
                     /db_xref="CDD:185400"
     Site            order(40..48,50,64..67,70,73,84..87,117..119,121)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:467036"
     Site            order(45,48,51..52,55..56,58,60,62..63,67..68,70..72,
                     74..75,77,79,82..86,88..89,92..93,96..98,100..102,
                     104..106,109,118..122,126,129)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:467036"
     Site            order(49,52..53,56..57,59,95,99,102,109,113,118)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467036"
     Site            order(107,110..111,114..115,117,123..124,127..128,
                     130..132)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:467036"
     CDS             1..136
                     /gene="LOC133067733"
                     /coded_by="XM_061158582.1:133..543"
                     /db_xref="GeneID:133067733"
ORIGIN      
        1 martkqtark stggkaprkq latkaarksa pstggvkkph ryrpgtvalr eirryqkste
       61 llirklpfqr lvreiaqdfk tdlrfqsaai galqeaseay lvglfedtnl caihakrvti
      121 mpkdiqlarr irgera
//
LOCUS       XP_061014566             497 aa            linear   MAM 02-DEC-2023
DEFINITION  myocyte-specific enhancer factor 2A isoform X1 [Dama dama].
ACCESSION   XP_061014566
VERSION     XP_061014566.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158583.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..497
                     /product="myocyte-specific enhancer factor 2A isoform X1"
                     /calculated_mol_wt=53225
     Region          2..78
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,62,65..66,
                     69,72..73)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          97..154
                     /region_name="HJURP_C"
                     /note="Holliday junction regulator protein family
                     C-terminal repeat; pfam12347"
                     /db_xref="CDD:463543"
     CDS             1..497
                     /gene="MEF2A"
                     /coded_by="XM_061158583.1:353..1846"
                     /db_xref="GeneID:133067734"
ORIGIN      
        1 mgrkkiqitr imdernrqvt ftkrkfglmk kayelsvlcd ceialiifns snklfqyast
       61 dmdkvllkyt eynephesrt nsdivealnk kehrgcdspd pdtsyvltph teekykkine
      121 efdnmmrnhk iapglppqnf smsvtvpvts psalsytnpg sslvspslaa ssaladtsml
      181 sppqatlhrn vspgapqrpp stgsaggmls tsdltvpnga gsspvgngfv nsraspnlig
      241 ttganslgkv mptksppppg ggnlgmnsrk pdlrvvipps skgmmpplse eeelelntqr
      301 isssqatqpl atpvvsvttp slppqglvys amptayntdy sltsadlsal qgfnspgmls
      361 lgqvsawqqh hlgqaalnsl vaggqlsqgs nlsintnqni niksepispp rdrmtpsgfq
      421 pqpqpppppq apqpqprqev grspadslss ssssydgsdr edprgdfhsp vvlgrppnse
      481 drespsvkrm rmdawvt
//
LOCUS       XP_061014567             497 aa            linear   MAM 02-DEC-2023
DEFINITION  myocyte-specific enhancer factor 2A isoform X1 [Dama dama].
ACCESSION   XP_061014567
VERSION     XP_061014567.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158584.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..497
                     /product="myocyte-specific enhancer factor 2A isoform X1"
                     /calculated_mol_wt=53225
     Region          2..78
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,62,65..66,
                     69,72..73)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          97..154
                     /region_name="HJURP_C"
                     /note="Holliday junction regulator protein family
                     C-terminal repeat; pfam12347"
                     /db_xref="CDD:463543"
     CDS             1..497
                     /gene="MEF2A"
                     /coded_by="XM_061158584.1:356..1849"
                     /db_xref="GeneID:133067734"
ORIGIN      
        1 mgrkkiqitr imdernrqvt ftkrkfglmk kayelsvlcd ceialiifns snklfqyast
       61 dmdkvllkyt eynephesrt nsdivealnk kehrgcdspd pdtsyvltph teekykkine
      121 efdnmmrnhk iapglppqnf smsvtvpvts psalsytnpg sslvspslaa ssaladtsml
      181 sppqatlhrn vspgapqrpp stgsaggmls tsdltvpnga gsspvgngfv nsraspnlig
      241 ttganslgkv mptksppppg ggnlgmnsrk pdlrvvipps skgmmpplse eeelelntqr
      301 isssqatqpl atpvvsvttp slppqglvys amptayntdy sltsadlsal qgfnspgmls
      361 lgqvsawqqh hlgqaalnsl vaggqlsqgs nlsintnqni niksepispp rdrmtpsgfq
      421 pqpqpppppq apqpqprqev grspadslss ssssydgsdr edprgdfhsp vvlgrppnse
      481 drespsvkrm rmdawvt
//
LOCUS       XP_061014568             497 aa            linear   MAM 02-DEC-2023
DEFINITION  myocyte-specific enhancer factor 2A isoform X1 [Dama dama].
ACCESSION   XP_061014568
VERSION     XP_061014568.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158585.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..497
                     /product="myocyte-specific enhancer factor 2A isoform X1"
                     /calculated_mol_wt=53225
     Region          2..78
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,62,65..66,
                     69,72..73)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          97..154
                     /region_name="HJURP_C"
                     /note="Holliday junction regulator protein family
                     C-terminal repeat; pfam12347"
                     /db_xref="CDD:463543"
     CDS             1..497
                     /gene="MEF2A"
                     /coded_by="XM_061158585.1:350..1843"
                     /db_xref="GeneID:133067734"
ORIGIN      
        1 mgrkkiqitr imdernrqvt ftkrkfglmk kayelsvlcd ceialiifns snklfqyast
       61 dmdkvllkyt eynephesrt nsdivealnk kehrgcdspd pdtsyvltph teekykkine
      121 efdnmmrnhk iapglppqnf smsvtvpvts psalsytnpg sslvspslaa ssaladtsml
      181 sppqatlhrn vspgapqrpp stgsaggmls tsdltvpnga gsspvgngfv nsraspnlig
      241 ttganslgkv mptksppppg ggnlgmnsrk pdlrvvipps skgmmpplse eeelelntqr
      301 isssqatqpl atpvvsvttp slppqglvys amptayntdy sltsadlsal qgfnspgmls
      361 lgqvsawqqh hlgqaalnsl vaggqlsqgs nlsintnqni niksepispp rdrmtpsgfq
      421 pqpqpppppq apqpqprqev grspadslss ssssydgsdr edprgdfhsp vvlgrppnse
      481 drespsvkrm rmdawvt
//
LOCUS       XP_061014569             497 aa            linear   MAM 02-DEC-2023
DEFINITION  myocyte-specific enhancer factor 2A isoform X1 [Dama dama].
ACCESSION   XP_061014569
VERSION     XP_061014569.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158586.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..497
                     /product="myocyte-specific enhancer factor 2A isoform X1"
                     /calculated_mol_wt=53225
     Region          2..78
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,62,65..66,
                     69,72..73)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          97..154
                     /region_name="HJURP_C"
                     /note="Holliday junction regulator protein family
                     C-terminal repeat; pfam12347"
                     /db_xref="CDD:463543"
     CDS             1..497
                     /gene="MEF2A"
                     /coded_by="XM_061158586.1:158..1651"
                     /db_xref="GeneID:133067734"
ORIGIN      
        1 mgrkkiqitr imdernrqvt ftkrkfglmk kayelsvlcd ceialiifns snklfqyast
       61 dmdkvllkyt eynephesrt nsdivealnk kehrgcdspd pdtsyvltph teekykkine
      121 efdnmmrnhk iapglppqnf smsvtvpvts psalsytnpg sslvspslaa ssaladtsml
      181 sppqatlhrn vspgapqrpp stgsaggmls tsdltvpnga gsspvgngfv nsraspnlig
      241 ttganslgkv mptksppppg ggnlgmnsrk pdlrvvipps skgmmpplse eeelelntqr
      301 isssqatqpl atpvvsvttp slppqglvys amptayntdy sltsadlsal qgfnspgmls
      361 lgqvsawqqh hlgqaalnsl vaggqlsqgs nlsintnqni niksepispp rdrmtpsgfq
      421 pqpqpppppq apqpqprqev grspadslss ssssydgsdr edprgdfhsp vvlgrppnse
      481 drespsvkrm rmdawvt
//
LOCUS       XP_061014570             495 aa            linear   MAM 02-DEC-2023
DEFINITION  myocyte-specific enhancer factor 2A isoform X2 [Dama dama].
ACCESSION   XP_061014570
VERSION     XP_061014570.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158587.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..495
                     /product="myocyte-specific enhancer factor 2A isoform X2"
                     /calculated_mol_wt=52855
     Region          1..>235
                     /region_name="ARG80"
                     /note="Regulator of arginine metabolism and related MADS
                     box-containing transcription factors [Transcription];
                     COG5068"
                     /db_xref="CDD:227400"
     Region          2..78
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,62,65..66,
                     69,72..73)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     CDS             1..495
                     /gene="MEF2A"
                     /coded_by="XM_061158587.1:353..1840"
                     /db_xref="GeneID:133067734"
ORIGIN      
        1 mgrkkiqitr imdernrqvt ftkrkfglmk kayelsvlcd ceialiifns snklfqyast
       61 dmdkvllkyt eynephesrt nsdivetlrk kglngcespd addyfehspl sedrfsklne
      121 dsdfifkrgp pglppqnfsm svtvpvtsps alsytnpgss lvspslaass aladtsmlsp
      181 pqatlhrnvs pgapqrppst gsaggmlsts dltvpngags spvgngfvns raspnligtt
      241 ganslgkvmp tksppppggg nlgmnsrkpd lrvvippssk gmmpplseee elelntqris
      301 ssqatqplat pvvsvttpsl ppqglvysam ptayntdysl tsadlsalqg fnspgmlslg
      361 qvsawqqhhl gqaalnslva ggqlsqgsnl sintnqnini ksepispprd rmtpsgfqpq
      421 pqpppppqap qpqprqevgr spadslssss ssydgsdred prgdfhspvv lgrppnsedr
      481 espsvkrmrm dawvt
//
LOCUS       XP_061014571             489 aa            linear   MAM 02-DEC-2023
DEFINITION  myocyte-specific enhancer factor 2A isoform X3 [Dama dama].
ACCESSION   XP_061014571
VERSION     XP_061014571.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158588.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..489
                     /product="myocyte-specific enhancer factor 2A isoform X3"
                     /calculated_mol_wt=52266
     Region          2..78
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,62,65..66,
                     69,72..73)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          97..154
                     /region_name="HJURP_C"
                     /note="Holliday junction regulator protein family
                     C-terminal repeat; pfam12347"
                     /db_xref="CDD:463543"
     CDS             1..489
                     /gene="MEF2A"
                     /coded_by="XM_061158588.1:353..1822"
                     /db_xref="GeneID:133067734"
ORIGIN      
        1 mgrkkiqitr imdernrqvt ftkrkfglmk kayelsvlcd ceialiifns snklfqyast
       61 dmdkvllkyt eynephesrt nsdivealnk kehrgcdspd pdtsyvltph teekykkine
      121 efdnmmrnhk iapglppqnf smsvtvpvts psalsytnpg sslvspslaa ssaladtsml
      181 sppqatlhrn vspgapqrpp stgsaggmls tsdltvpnga gsspvgngfv nsraspnlig
      241 ttganslgkv mptksppppg ggnlgmnsrk pdlrvvipps skgmmpplnt qrisssqatq
      301 platpvvsvt tpslppqglv ysamptaynt dysltsadls alqgfnspgm lslgqvsawq
      361 qhhlgqaaln slvaggqlsq gsnlsintnq niniksepis pprdrmtpsg fqpqpqpppp
      421 pqapqpqprq evgrspadsl ssssssydgs dredprgdfh spvvlgrppn sedrespsvk
      481 rmrmdawvt
//
LOCUS       XP_061014572             487 aa            linear   MAM 02-DEC-2023
DEFINITION  myocyte-specific enhancer factor 2A isoform X4 [Dama dama].
ACCESSION   XP_061014572
VERSION     XP_061014572.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158589.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..487
                     /product="myocyte-specific enhancer factor 2A isoform X4"
                     /calculated_mol_wt=51896
     Region          1..>235
                     /region_name="ARG80"
                     /note="Regulator of arginine metabolism and related MADS
                     box-containing transcription factors [Transcription];
                     COG5068"
                     /db_xref="CDD:227400"
     Region          2..78
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,62,65..66,
                     69,72..73)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     CDS             1..487
                     /gene="MEF2A"
                     /coded_by="XM_061158589.1:353..1816"
                     /db_xref="GeneID:133067734"
ORIGIN      
        1 mgrkkiqitr imdernrqvt ftkrkfglmk kayelsvlcd ceialiifns snklfqyast
       61 dmdkvllkyt eynephesrt nsdivetlrk kglngcespd addyfehspl sedrfsklne
      121 dsdfifkrgp pglppqnfsm svtvpvtsps alsytnpgss lvspslaass aladtsmlsp
      181 pqatlhrnvs pgapqrppst gsaggmlsts dltvpngags spvgngfvns raspnligtt
      241 ganslgkvmp tksppppggg nlgmnsrkpd lrvvippssk gmmpplntqr isssqatqpl
      301 atpvvsvttp slppqglvys amptayntdy sltsadlsal qgfnspgmls lgqvsawqqh
      361 hlgqaalnsl vaggqlsqgs nlsintnqni niksepispp rdrmtpsgfq pqpqpppppq
      421 apqpqprqev grspadslss ssssydgsdr edprgdfhsp vvlgrppnse drespsvkrm
      481 rmdawvt
//
LOCUS       XP_061014573             463 aa            linear   MAM 02-DEC-2023
DEFINITION  myocyte-specific enhancer factor 2A isoform X5 [Dama dama].
ACCESSION   XP_061014573
VERSION     XP_061014573.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158590.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..463
                     /product="myocyte-specific enhancer factor 2A isoform X5"
                     /calculated_mol_wt=49878
     Region          2..78
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,62,65..66,
                     69,72..73)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          97..154
                     /region_name="HJURP_C"
                     /note="Holliday junction regulator protein family
                     C-terminal repeat; pfam12347"
                     /db_xref="CDD:463543"
     CDS             1..463
                     /gene="MEF2A"
                     /coded_by="XM_061158590.1:353..1744"
                     /db_xref="GeneID:133067734"
ORIGIN      
        1 mgrkkiqitr imdernrqvt ftkrkfglmk kayelsvlcd ceialiifns snklfqyast
       61 dmdkvllkyt eynephesrt nsdivealnk kehrgcdspd pdtsyvltph teekykkine
      121 efdnmmrnhk iapglppqnf smsvtvpvts psalsytnpg sslvspslaa ssaladtsml
      181 sppqatlhrn vspgapqrpp stgsaggmls tsdltvpnga gsspvgggnl gmnsrkpdlr
      241 vvippsskgm mpplseeeel elntqrisss qatqplatpv vsvttpslpp qglvysampt
      301 ayntdyslts adlsalqgfn spgmlslgqv sawqqhhlgq aalnslvagg qlsqgsnlsi
      361 ntnqniniks epispprdrm tpsgfqpqpq pppppqapqp qprqevgrsp adslssssss
      421 ydgsdredpr gdfhspvvlg rppnsedres psvkrmrmda wvt
//
LOCUS       XP_061014574             455 aa            linear   MAM 02-DEC-2023
DEFINITION  myocyte-specific enhancer factor 2A isoform X6 [Dama dama].
ACCESSION   XP_061014574
VERSION     XP_061014574.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158591.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..455
                     /product="myocyte-specific enhancer factor 2A isoform X6"
                     /calculated_mol_wt=48919
     Region          2..78
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,62,65..66,
                     69,72..73)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          97..154
                     /region_name="HJURP_C"
                     /note="Holliday junction regulator protein family
                     C-terminal repeat; pfam12347"
                     /db_xref="CDD:463543"
     Region          <138..>302
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     CDS             1..455
                     /gene="MEF2A"
                     /coded_by="XM_061158591.1:353..1720"
                     /db_xref="GeneID:133067734"
ORIGIN      
        1 mgrkkiqitr imdernrqvt ftkrkfglmk kayelsvlcd ceialiifns snklfqyast
       61 dmdkvllkyt eynephesrt nsdivealnk kehrgcdspd pdtsyvltph teekykkine
      121 efdnmmrnhk iapglppqnf smsvtvpvts psalsytnpg sslvspslaa ssaladtsml
      181 sppqatlhrn vspgapqrpp stgsaggmls tsdltvpnga gsspvgggnl gmnsrkpdlr
      241 vvippsskgm mpplntqris ssqatqplat pvvsvttpsl ppqglvysam ptayntdysl
      301 tsadlsalqg fnspgmlslg qvsawqqhhl gqaalnslva ggqlsqgsnl sintnqnini
      361 ksepispprd rmtpsgfqpq pqpppppqap qpqprqevgr spadslssss ssydgsdred
      421 prgdfhspvv lgrppnsedr espsvkrmrm dawvt
//
LOCUS       XP_061014575             416 aa            linear   MAM 02-DEC-2023
DEFINITION  myocyte-specific enhancer factor 2A isoform X7 [Dama dama].
ACCESSION   XP_061014575
VERSION     XP_061014575.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158592.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..416
                     /product="myocyte-specific enhancer factor 2A isoform X7"
                     /calculated_mol_wt=43723
     Region          16..73
                     /region_name="HJURP_C"
                     /note="Holliday junction regulator protein family
                     C-terminal repeat; pfam12347"
                     /db_xref="CDD:463543"
     CDS             1..416
                     /gene="MEF2A"
                     /coded_by="XM_061158592.1:262..1512"
                     /db_xref="GeneID:133067734"
ORIGIN      
        1 mvihwalnkk ehrgcdspdp dtsyvltpht eekykkinee fdnmmrnhki apglppqnfs
       61 msvtvpvtsp salsytnpgs slvspslaas saladtsmls ppqatlhrnv spgapqrpps
      121 tgsaggmlst sdltvpngag sspvgngfvn sraspnligt tganslgkvm ptksppppgg
      181 gnlgmnsrkp dlrvvippss kgmmpplsee eelelntqri sssqatqpla tpvvsvttps
      241 lppqglvysa mptayntdys ltsadlsalq gfnspgmlsl gqvsawqqhh lgqaalnslv
      301 aggqlsqgsn lsintnqnin iksepisppr drmtpsgfqp qpqpppppqa pqpqprqevg
      361 rspadslsss sssydgsdre dprgdfhspv vlgrppnsed respsvkrmr mdawvt
//
LOCUS       XP_061014576             414 aa            linear   MAM 02-DEC-2023
DEFINITION  myocyte-specific enhancer factor 2A isoform X8 [Dama dama].
ACCESSION   XP_061014576
VERSION     XP_061014576.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158593.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..414
                     /product="myocyte-specific enhancer factor 2A isoform X8"
                     /calculated_mol_wt=43353
     Region          16..71
                     /region_name="HJURP_C"
                     /note="Holliday junction regulator protein family
                     C-terminal repeat; pfam12347"
                     /db_xref="CDD:463543"
     CDS             1..414
                     /gene="MEF2A"
                     /coded_by="XM_061158593.1:262..1506"
                     /db_xref="GeneID:133067734"
ORIGIN      
        1 mvihwtlrkk glngcespda ddyfehspls edrfsklned sdfifkrgpp glppqnfsms
       61 vtvpvtspsa lsytnpgssl vspslaassa ladtsmlspp qatlhrnvsp gapqrppstg
      121 saggmlstsd ltvpngagss pvgngfvnsr aspnligttg anslgkvmpt ksppppgggn
      181 lgmnsrkpdl rvvippsskg mmpplseeee lelntqriss sqatqplatp vvsvttpslp
      241 pqglvysamp tayntdyslt sadlsalqgf nspgmlslgq vsawqqhhlg qaalnslvag
      301 gqlsqgsnls intnqninik sepispprdr mtpsgfqpqp qpppppqapq pqprqevgrs
      361 padslsssss sydgsdredp rgdfhspvvl grppnsedre spsvkrmrmd awvt
//
LOCUS       XP_061014577             533 aa            linear   MAM 02-DEC-2023
DEFINITION  myocyte-specific enhancer factor 2A isoform X9 [Dama dama].
ACCESSION   XP_061014577
VERSION     XP_061014577.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158594.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..533
                     /product="myocyte-specific enhancer factor 2A isoform X9"
                     /calculated_mol_wt=57310
     Region          1..>281
                     /region_name="ARG80"
                     /note="Regulator of arginine metabolism and related MADS
                     box-containing transcription factors [Transcription];
                     COG5068"
                     /db_xref="CDD:227400"
     Region          2..78
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,62,65..66,
                     69,72..73)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          141..198
                     /region_name="HJURP_C"
                     /note="Holliday junction regulator protein family
                     C-terminal repeat; pfam12347"
                     /db_xref="CDD:463543"
     CDS             1..533
                     /gene="MEF2A"
                     /coded_by="XM_061158594.1:353..1954"
                     /db_xref="GeneID:133067734"
ORIGIN      
        1 mgrkkiqitr imdernrqvt ftkrkfglmk kayelsvlcd ceialiifns snklfqyast
       61 dmdkvllkyt eynephesrt nsdivetlrk kglngcespd addyfehspl sedrfsklne
      121 dsdfifkrgp alnkkehrgc dspdpdtsyv ltphteekyk kineefdnmm rnhkiapglp
      181 pqnfsmsvtv pvtspsalsy tnpgsslvsp slaassalad tsmlsppqat lhrnvspgap
      241 qrppstgsag gmlstsdltv pngagsspvg ngfvnsrasp nligttgans lgkvmptksp
      301 pppgggnlgm nsrkpdlrvv ippsskgmmp plntqrisss qatqplatpv vsvttpslpp
      361 qglvysampt ayntdyslts adlsalqgfn spgmlslgqv sawqqhhlgq aalnslvagg
      421 qlsqgsnlsi ntnqniniks epispprdrm tpsgfqpqpq pppppqapqp qprqevgrsp
      481 adslssssss ydgsdredpr gdfhspvvlg rppnsedres psvkrmrmda wvt
//
LOCUS       XP_061014578             367 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat-containing protein 28 isoform X1 [Dama dama].
ACCESSION   XP_061014578
VERSION     XP_061014578.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158595.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..367
                     /product="leucine-rich repeat-containing protein 28
                     isoform X1"
                     /calculated_mol_wt=41454
     Region          20..42
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <38..>221
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          43..66
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          67..89
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          90..112
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          113..135
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          136..158
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          159..181
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          182..204
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..367
                     /gene="LRRC28"
                     /coded_by="XM_061158595.1:157..1260"
                     /db_xref="GeneID:133067735"
ORIGIN      
        1 maselcktis varlekhknl flnyrnlqhf plellkdegl qylerlymkr nslttlpenl
       61 aqklpnlvel ylhsnnivvv peaigslvkl qcldlsdnal eivcpeigrl ralrhlrlan
      121 nqlqflppev gdlkelqtld istnrlltlp erlhlclslq yltvdrnrlw cvprhlcqlp
      181 slnelsmagn rlaflpldlg rsrelqyvyv dnnihlkglp sflynkvigc sgcgapiqvs
      241 evkllsfssg qltvflpaev kaigtekdhv lplqelamrt lhhtyhaslk dldvlspvsl
      301 prsllellhc plghchrcse pmftivypkl fplretpmag lhqgrttvsf vayccstqcl
      361 qtfdlls
//
LOCUS       XP_061014579             304 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat-containing protein 28 isoform X2 [Dama dama].
ACCESSION   XP_061014579
VERSION     XP_061014579.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158596.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..304
                     /product="leucine-rich repeat-containing protein 28
                     isoform X2"
                     /calculated_mol_wt=33999
     Region          20..42
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <38..>221
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          43..66
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          67..89
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          90..112
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          113..135
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          136..158
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          159..181
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          182..204
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..304
                     /gene="LRRC28"
                     /coded_by="XM_061158596.1:157..1071"
                     /db_xref="GeneID:133067735"
ORIGIN      
        1 maselcktis varlekhknl flnyrnlqhf plellkdegl qylerlymkr nslttlpenl
       61 aqklpnlvel ylhsnnivvv peaigslvkl qcldlsdnal eivcpeigrl ralrhlrlan
      121 nqlqflppev gdlkelqtld istnrlltlp erlhlclslq yltvdrnrlw cvprhlcqlp
      181 slnelsmagn rlaflpldlg rsrelqyvyv dnnihlkglp sflynkvigc sgsgrpvssl
      241 vaqkppgaaa lppgtlspvq rahvydrlpq alslerdang raapgednce fcgllllhpv
      301 sadf
//
LOCUS       XP_061014580             298 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat-containing protein 28 isoform X3 [Dama dama].
ACCESSION   XP_061014580
VERSION     XP_061014580.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158597.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..298
                     /product="leucine-rich repeat-containing protein 28
                     isoform X3"
                     /calculated_mol_wt=33516
     Region          <5..>153
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          20..42
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          43..66
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          67..89
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          90..112
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          113..135
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..298
                     /gene="LRRC28"
                     /coded_by="XM_061158597.1:157..1053"
                     /db_xref="GeneID:133067735"
ORIGIN      
        1 maselcktis varlekhknl flnyrnlqhf plellkdegl qylerlymkr nslttlpenl
       61 aqklpnlvel ylhsnnivvv peaigslvkl qcldlsdnal eivcpeigrl ralrhlrlan
      121 nqlqflppdl grsrelqyvy vdnnihlkgl psflynkvig csgcgapiqv sevkllsfss
      181 gqltvflpae vkaigtekdh vlplqelamr tlhhtyhasl kdldvlspvs lprsllellh
      241 cplghchrcs epmftivypk lfplretpma glhqgrttvs fvayccstqc lqtfdlls
//
LOCUS       XP_061014581            1543 aa            linear   MAM 02-DEC-2023
DEFINITION  synemin isoform X1 [Dama dama].
ACCESSION   XP_061014581
VERSION     XP_061014581.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158598.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1543
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1543
                     /product="synemin isoform X1"
                     /calculated_mol_wt=170214
     Region          11..318
                     /region_name="Filament"
                     /note="Intermediate filament protein; pfam00038"
                     /db_xref="CDD:459643"
     Region          <192..958
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     CDS             1..1543
                     /gene="SYNM"
                     /coded_by="XM_061158598.1:95..4726"
                     /db_xref="GeneID:133067738"
ORIGIN      
        1 mlswrlhtgp ekaelqelna rlyeyvcrvr elerenllle eelrgrrgqe glwaeaearc
       61 eeearglrrq ldelswatal aqgerdalrr elrelqllge earaargrld aeldsqrrel
      121 qeelaaraal eallgrlqae rrgldaarer dvrelraraa gltlryrgrv agpaappprl
      181 relhedcall vaeawretvq ryedevrele ealrrgresq reaeeetrlc aqeaealrre
      241 aleleqlral leeellrvre aselqaeerq reiayledek aaltlamadr lrdyqelvqv
      301 ktglslevat yrallegesn peilivteci envpqefrdk syqyttsvlq kenernlfpr
      361 qkappasfrq slaprsqtsv rsdarrdvlr sgyssfttaw qenayektas gqtnfrafsp
      421 tpgllrntea qaktfperpr tegtkappts sakesaaape syrerrdkma aatsegtwsn
      481 ertvtlgkkt eakatkeqer nrpetiqtkr eekmfdskek aseernlrwe eltkldkear
      541 kreseqmrek arekeslkea svkgreipir levsqdstak vapqglqtpl kkdagdgtgr
      601 gvetreaafs lgasdtaslk ggsmtetiae nivssilkqf thspeaeasa esfpdtkvty
      661 vdrkevpgdr kakteivves klteeidisd eagldyllsk dakevelkgk saerligdvi
      721 rlglkgregr akvvnveiie epvsyvssek adefstpfev eevddvspgs rglveereea
      781 vyresdvtcs gnagqearrp qesvthveev teagdlegeq syfvstpdeh pgahereegs
      841 vygqihieee stiryswqde ivpgsrrrtq rddvpgekvv kpedvpeasl egdrasapwk
      901 eqtrsgefha kpiviekeik iphefhtsik qgskeprhql vevieqleet lpermkeels
      961 altregqggp agvsfdvkkv qsagsgavtl vaevnlsqtv dadqldleel srdeageiek
     1021 avesvvrdsl arrhspgpgs peaeagrgfr rwatqelysa stgevdagla sppgpvsatv
     1081 evtsptgfvh ahvledvsqs ggrvriaspg twrteqvsae graaqavevs gegkanwaag
     1141 segasqsarl ftlgprqspv stevvfpapd aacleaggte epgpaepprf grhspfgsqq
     1201 fyaqrevifq apvsgvgkag dssqaegsag tqtsikhlrl gaqeglsert qltaplsgtv
     1261 elgvreasvh meawsgdgss irhvtigpqt hqttepvvpp plefsdsess thregsavet
     1321 latrsytvgr nilmteksaf qravsespqe asagdmagae visgvsrsfr hiqlgpaeak
     1381 tsehivfhgp isktfplags vdspevgeva dsgrtlrhva lgpketsftf qmdvsnieat
     1441 prwtqeatvl fpagteaeap svsehgawrd assrndlaag vsfqgsagdr hqapgergke
     1501 qaefdktvql qrmvdqrsvi sdekkvally ldsqeeeneg hwf
//
LOCUS       XP_061014583            1240 aa            linear   MAM 02-DEC-2023
DEFINITION  synemin isoform X2 [Dama dama].
ACCESSION   XP_061014583
VERSION     XP_061014583.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158600.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1240
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1240
                     /product="synemin isoform X2"
                     /calculated_mol_wt=138546
     Region          11..318
                     /region_name="Filament"
                     /note="Intermediate filament protein; pfam00038"
                     /db_xref="CDD:459643"
     Region          <192..958
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     CDS             1..1240
                     /gene="SYNM"
                     /coded_by="XM_061158600.1:95..3817"
                     /db_xref="GeneID:133067738"
ORIGIN      
        1 mlswrlhtgp ekaelqelna rlyeyvcrvr elerenllle eelrgrrgqe glwaeaearc
       61 eeearglrrq ldelswatal aqgerdalrr elrelqllge earaargrld aeldsqrrel
      121 qeelaaraal eallgrlqae rrgldaarer dvrelraraa gltlryrgrv agpaappprl
      181 relhedcall vaeawretvq ryedevrele ealrrgresq reaeeetrlc aqeaealrre
      241 aleleqlral leeellrvre aselqaeerq reiayledek aaltlamadr lrdyqelvqv
      301 ktglslevat yrallegesn peilivteci envpqefrdk syqyttsvlq kenernlfpr
      361 qkappasfrq slaprsqtsv rsdarrdvlr sgyssfttaw qenayektas gqtnfrafsp
      421 tpgllrntea qaktfperpr tegtkappts sakesaaape syrerrdkma aatsegtwsn
      481 ertvtlgkkt eakatkeqer nrpetiqtkr eekmfdskek aseernlrwe eltkldkear
      541 kreseqmrek arekeslkea svkgreipir levsqdstak vapqglqtpl kkdagdgtgr
      601 gvetreaafs lgasdtaslk ggsmtetiae nivssilkqf thspeaeasa esfpdtkvty
      661 vdrkevpgdr kakteivves klteeidisd eagldyllsk dakevelkgk saerligdvi
      721 rlglkgregr akvvnveiie epvsyvssek adefstpfev eevddvspgs rglveereea
      781 vyresdvtcs gnagqearrp qesvthveev teagdlegeq syfvstpdeh pgahereegs
      841 vygqihieee stiryswqde ivpgsrrrtq rddvpgekvv kpedvpeasl egdrasapwk
      901 eqtrsgefha kpiviekeik iphefhtsik qgskeprhql vevieqleet lpermkeels
      961 altregqggp agvsfdvkkv qsagsgavtl vaevnlsqtv dadqldleel srdeageiek
     1021 avesvvrdsl arrhspgpgs peaeagrgfr rwatqelysa stgevdagla sppgpvsatv
     1081 evtsptgfvh ahvledvsqs ggrvriaspg twrteqvsae graaqavemd vsnieatprw
     1141 tqeatvlfpa gteaeapsvs ehgawrdass rndlaagvsf qgsagdrhqa pgergkeqae
     1201 fdktvqlqrm vdqrsvisde kkvallylds qeeeneghwf
//
LOCUS       XP_061014584             446 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 23 isoform X1 [Dama dama].
ACCESSION   XP_061014584
VERSION     XP_061014584.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158601.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..446
                     /product="tetratricopeptide repeat protein 23 isoform X1"
                     /calculated_mol_wt=49115
     Region          28..>214
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          87..116
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(88,91..92,95..96,98,138,141..142,145..146,148..149,
                     185,188..189,194..195,198)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          121..179
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          184..214
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          186..254
                     /region_name="TPR_12"
                     /note="Tetratricopeptide repeat; pfam13424"
                     /db_xref="CDD:315987"
     Region          228..254
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          314..385
                     /region_name="TPR_12"
                     /note="Tetratricopeptide repeat; pfam13424"
                     /db_xref="CDD:315987"
     CDS             1..446
                     /gene="TTC23"
                     /coded_by="XM_061158601.1:129..1469"
                     /db_xref="GeneID:133067739"
ORIGIN      
        1 mqesqethis nhldeivaav sitprkklqn qllqralfqp preklrlsed kaksyasshe
       61 ykkalhelvh cmaltricyg dshwklaeah vnlakgylql kgmslqakqh aekakeiltn
      121 sivppyndnt dvfkcsvelf htlgqallsl qkfkeasknl tkaeilskem lqggkiikee
      181 wmeiqarikl sfaqvyqgqk kskealphyq ealeyteisr gekslecvpi lrglaaaeqa
      241 lgfhdasvsn lvqahlivlr gspsqeeaaa sahavacaav asgrpehhdv aeqyfqdsma
      301 nlkdaegmek akflsiqddy chflqvtgqd eraasilres leakvavfgd fspevaetyr
      361 llgvadlaqg nqtgahkklk kclqiqtlly gpqdkrtlat qqtmdipska pevparprps
      421 pgakaafcag grphsvpgra rpsaad
//
LOCUS       XP_061014585             446 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 23 isoform X1 [Dama dama].
ACCESSION   XP_061014585
VERSION     XP_061014585.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158602.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..446
                     /product="tetratricopeptide repeat protein 23 isoform X1"
                     /calculated_mol_wt=49115
     Region          28..>214
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          87..116
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(88,91..92,95..96,98,138,141..142,145..146,148..149,
                     185,188..189,194..195,198)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          121..179
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          184..214
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          186..254
                     /region_name="TPR_12"
                     /note="Tetratricopeptide repeat; pfam13424"
                     /db_xref="CDD:315987"
     Region          228..254
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          314..385
                     /region_name="TPR_12"
                     /note="Tetratricopeptide repeat; pfam13424"
                     /db_xref="CDD:315987"
     CDS             1..446
                     /gene="TTC23"
                     /coded_by="XM_061158602.1:584..1924"
                     /db_xref="GeneID:133067739"
ORIGIN      
        1 mqesqethis nhldeivaav sitprkklqn qllqralfqp preklrlsed kaksyasshe
       61 ykkalhelvh cmaltricyg dshwklaeah vnlakgylql kgmslqakqh aekakeiltn
      121 sivppyndnt dvfkcsvelf htlgqallsl qkfkeasknl tkaeilskem lqggkiikee
      181 wmeiqarikl sfaqvyqgqk kskealphyq ealeyteisr gekslecvpi lrglaaaeqa
      241 lgfhdasvsn lvqahlivlr gspsqeeaaa sahavacaav asgrpehhdv aeqyfqdsma
      301 nlkdaegmek akflsiqddy chflqvtgqd eraasilres leakvavfgd fspevaetyr
      361 llgvadlaqg nqtgahkklk kclqiqtlly gpqdkrtlat qqtmdipska pevparprps
      421 pgakaafcag grphsvpgra rpsaad
//
LOCUS       XP_061014586             446 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 23 isoform X1 [Dama dama].
ACCESSION   XP_061014586
VERSION     XP_061014586.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158603.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..446
                     /product="tetratricopeptide repeat protein 23 isoform X1"
                     /calculated_mol_wt=49115
     Region          28..>214
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          87..116
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(88,91..92,95..96,98,138,141..142,145..146,148..149,
                     185,188..189,194..195,198)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          121..179
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          184..214
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          186..254
                     /region_name="TPR_12"
                     /note="Tetratricopeptide repeat; pfam13424"
                     /db_xref="CDD:315987"
     Region          228..254
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          314..385
                     /region_name="TPR_12"
                     /note="Tetratricopeptide repeat; pfam13424"
                     /db_xref="CDD:315987"
     CDS             1..446
                     /gene="TTC23"
                     /coded_by="XM_061158603.1:299..1639"
                     /db_xref="GeneID:133067739"
ORIGIN      
        1 mqesqethis nhldeivaav sitprkklqn qllqralfqp preklrlsed kaksyasshe
       61 ykkalhelvh cmaltricyg dshwklaeah vnlakgylql kgmslqakqh aekakeiltn
      121 sivppyndnt dvfkcsvelf htlgqallsl qkfkeasknl tkaeilskem lqggkiikee
      181 wmeiqarikl sfaqvyqgqk kskealphyq ealeyteisr gekslecvpi lrglaaaeqa
      241 lgfhdasvsn lvqahlivlr gspsqeeaaa sahavacaav asgrpehhdv aeqyfqdsma
      301 nlkdaegmek akflsiqddy chflqvtgqd eraasilres leakvavfgd fspevaetyr
      361 llgvadlaqg nqtgahkklk kclqiqtlly gpqdkrtlat qqtmdipska pevparprps
      421 pgakaafcag grphsvpgra rpsaad
//
LOCUS       XP_061014587             446 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 23 isoform X1 [Dama dama].
ACCESSION   XP_061014587
VERSION     XP_061014587.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158604.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..446
                     /product="tetratricopeptide repeat protein 23 isoform X1"
                     /calculated_mol_wt=49115
     Region          28..>214
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          87..116
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(88,91..92,95..96,98,138,141..142,145..146,148..149,
                     185,188..189,194..195,198)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          121..179
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          184..214
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          186..254
                     /region_name="TPR_12"
                     /note="Tetratricopeptide repeat; pfam13424"
                     /db_xref="CDD:315987"
     Region          228..254
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          314..385
                     /region_name="TPR_12"
                     /note="Tetratricopeptide repeat; pfam13424"
                     /db_xref="CDD:315987"
     CDS             1..446
                     /gene="TTC23"
                     /coded_by="XM_061158604.1:447..1787"
                     /db_xref="GeneID:133067739"
ORIGIN      
        1 mqesqethis nhldeivaav sitprkklqn qllqralfqp preklrlsed kaksyasshe
       61 ykkalhelvh cmaltricyg dshwklaeah vnlakgylql kgmslqakqh aekakeiltn
      121 sivppyndnt dvfkcsvelf htlgqallsl qkfkeasknl tkaeilskem lqggkiikee
      181 wmeiqarikl sfaqvyqgqk kskealphyq ealeyteisr gekslecvpi lrglaaaeqa
      241 lgfhdasvsn lvqahlivlr gspsqeeaaa sahavacaav asgrpehhdv aeqyfqdsma
      301 nlkdaegmek akflsiqddy chflqvtgqd eraasilres leakvavfgd fspevaetyr
      361 llgvadlaqg nqtgahkklk kclqiqtlly gpqdkrtlat qqtmdipska pevparprps
      421 pgakaafcag grphsvpgra rpsaad
//
LOCUS       XP_061014588             446 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 23 isoform X1 [Dama dama].
ACCESSION   XP_061014588
VERSION     XP_061014588.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158605.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..446
                     /product="tetratricopeptide repeat protein 23 isoform X1"
                     /calculated_mol_wt=49115
     Region          28..>214
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          87..116
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(88,91..92,95..96,98,138,141..142,145..146,148..149,
                     185,188..189,194..195,198)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          121..179
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          184..214
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          186..254
                     /region_name="TPR_12"
                     /note="Tetratricopeptide repeat; pfam13424"
                     /db_xref="CDD:315987"
     Region          228..254
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          314..385
                     /region_name="TPR_12"
                     /note="Tetratricopeptide repeat; pfam13424"
                     /db_xref="CDD:315987"
     CDS             1..446
                     /gene="TTC23"
                     /coded_by="XM_061158605.1:359..1699"
                     /db_xref="GeneID:133067739"
ORIGIN      
        1 mqesqethis nhldeivaav sitprkklqn qllqralfqp preklrlsed kaksyasshe
       61 ykkalhelvh cmaltricyg dshwklaeah vnlakgylql kgmslqakqh aekakeiltn
      121 sivppyndnt dvfkcsvelf htlgqallsl qkfkeasknl tkaeilskem lqggkiikee
      181 wmeiqarikl sfaqvyqgqk kskealphyq ealeyteisr gekslecvpi lrglaaaeqa
      241 lgfhdasvsn lvqahlivlr gspsqeeaaa sahavacaav asgrpehhdv aeqyfqdsma
      301 nlkdaegmek akflsiqddy chflqvtgqd eraasilres leakvavfgd fspevaetyr
      361 llgvadlaqg nqtgahkklk kclqiqtlly gpqdkrtlat qqtmdipska pevparprps
      421 pgakaafcag grphsvpgra rpsaad
//
LOCUS       XP_061014589             446 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 23 isoform X1 [Dama dama].
ACCESSION   XP_061014589
VERSION     XP_061014589.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158606.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..446
                     /product="tetratricopeptide repeat protein 23 isoform X1"
                     /calculated_mol_wt=49115
     Region          28..>214
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          87..116
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(88,91..92,95..96,98,138,141..142,145..146,148..149,
                     185,188..189,194..195,198)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          121..179
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          184..214
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          186..254
                     /region_name="TPR_12"
                     /note="Tetratricopeptide repeat; pfam13424"
                     /db_xref="CDD:315987"
     Region          228..254
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          314..385
                     /region_name="TPR_12"
                     /note="Tetratricopeptide repeat; pfam13424"
                     /db_xref="CDD:315987"
     CDS             1..446
                     /gene="TTC23"
                     /coded_by="XM_061158606.1:301..1641"
                     /db_xref="GeneID:133067739"
ORIGIN      
        1 mqesqethis nhldeivaav sitprkklqn qllqralfqp preklrlsed kaksyasshe
       61 ykkalhelvh cmaltricyg dshwklaeah vnlakgylql kgmslqakqh aekakeiltn
      121 sivppyndnt dvfkcsvelf htlgqallsl qkfkeasknl tkaeilskem lqggkiikee
      181 wmeiqarikl sfaqvyqgqk kskealphyq ealeyteisr gekslecvpi lrglaaaeqa
      241 lgfhdasvsn lvqahlivlr gspsqeeaaa sahavacaav asgrpehhdv aeqyfqdsma
      301 nlkdaegmek akflsiqddy chflqvtgqd eraasilres leakvavfgd fspevaetyr
      361 llgvadlaqg nqtgahkklk kclqiqtlly gpqdkrtlat qqtmdipska pevparprps
      421 pgakaafcag grphsvpgra rpsaad
//
LOCUS       XP_061014590             446 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 23 isoform X1 [Dama dama].
ACCESSION   XP_061014590
VERSION     XP_061014590.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158607.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..446
                     /product="tetratricopeptide repeat protein 23 isoform X1"
                     /calculated_mol_wt=49115
     Region          28..>214
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          87..116
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(88,91..92,95..96,98,138,141..142,145..146,148..149,
                     185,188..189,194..195,198)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          121..179
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          184..214
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          186..254
                     /region_name="TPR_12"
                     /note="Tetratricopeptide repeat; pfam13424"
                     /db_xref="CDD:315987"
     Region          228..254
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          314..385
                     /region_name="TPR_12"
                     /note="Tetratricopeptide repeat; pfam13424"
                     /db_xref="CDD:315987"
     CDS             1..446
                     /gene="TTC23"
                     /coded_by="XM_061158607.1:607..1947"
                     /db_xref="GeneID:133067739"
ORIGIN      
        1 mqesqethis nhldeivaav sitprkklqn qllqralfqp preklrlsed kaksyasshe
       61 ykkalhelvh cmaltricyg dshwklaeah vnlakgylql kgmslqakqh aekakeiltn
      121 sivppyndnt dvfkcsvelf htlgqallsl qkfkeasknl tkaeilskem lqggkiikee
      181 wmeiqarikl sfaqvyqgqk kskealphyq ealeyteisr gekslecvpi lrglaaaeqa
      241 lgfhdasvsn lvqahlivlr gspsqeeaaa sahavacaav asgrpehhdv aeqyfqdsma
      301 nlkdaegmek akflsiqddy chflqvtgqd eraasilres leakvavfgd fspevaetyr
      361 llgvadlaqg nqtgahkklk kclqiqtlly gpqdkrtlat qqtmdipska pevparprps
      421 pgakaafcag grphsvpgra rpsaad
//
LOCUS       XP_061014591             421 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 23 isoform X2 [Dama dama].
ACCESSION   XP_061014591
VERSION     XP_061014591.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158608.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..421
                     /product="tetratricopeptide repeat protein 23 isoform X2"
                     /calculated_mol_wt=46870
     Region          28..>214
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          87..116
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(88,91..92,95..96,98,138,141..142,145..146,148..149,
                     185,188..189,194..195,198)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          121..179
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          184..214
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          186..254
                     /region_name="TPR_12"
                     /note="Tetratricopeptide repeat; pfam13424"
                     /db_xref="CDD:315987"
     Region          228..254
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          314..385
                     /region_name="TPR_12"
                     /note="Tetratricopeptide repeat; pfam13424"
                     /db_xref="CDD:315987"
     CDS             1..421
                     /gene="TTC23"
                     /coded_by="XM_061158608.1:129..1394"
                     /db_xref="GeneID:133067739"
ORIGIN      
        1 mqesqethis nhldeivaav sitprkklqn qllqralfqp preklrlsed kaksyasshe
       61 ykkalhelvh cmaltricyg dshwklaeah vnlakgylql kgmslqakqh aekakeiltn
      121 sivppyndnt dvfkcsvelf htlgqallsl qkfkeasknl tkaeilskem lqggkiikee
      181 wmeiqarikl sfaqvyqgqk kskealphyq ealeyteisr gekslecvpi lrglaaaeqa
      241 lgfhdasvsn lvqahlivlr gspsqeeaaa sahavacaav asgrpehhdv aeqyfqdsma
      301 nlkdaegmek akflsiqddy chflqvtgqd eraasilres leakvavfgd fspevaetyr
      361 llgvadlaqg nqtgahkklk kclqiqtlly gpqdkrtlat qqtmdipskr khnprmglvp
      421 l
//
LOCUS       XP_061014592             413 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 23 isoform X3 [Dama dama].
ACCESSION   XP_061014592
VERSION     XP_061014592.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158609.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..413
                     /product="tetratricopeptide repeat protein 23 isoform X3"
                     /calculated_mol_wt=45379
     Region          28..>181
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          156..221
                     /region_name="TPR_12"
                     /note="Tetratricopeptide repeat; pfam13424"
                     /db_xref="CDD:315987"
     Region          281..352
                     /region_name="TPR_12"
                     /note="Tetratricopeptide repeat; pfam13424"
                     /db_xref="CDD:315987"
     CDS             1..413
                     /gene="TTC23"
                     /coded_by="XM_061158609.1:129..1370"
                     /db_xref="GeneID:133067739"
ORIGIN      
        1 mqesqethis nhldeivaav sitprkklqn qllqralfqp preklrlsed kaksyasshe
       61 ykkalhelvh cmaltricyg dshwklaeah vnlakgylql kgmslqakqh aekakeiltn
      121 sivppyndnt dvfkcsvelf htlgqallsl qkypfasnly rvyqgqkksk ealphyqeal
      181 eyteisrgek slecvpilrg laaaeqalgf hdasvsnlvq ahlivlrgsp sqeeaaasah
      241 avacaavasg rpehhdvaeq yfqdsmanlk daegmekakf lsiqddychf lqvtgqdera
      301 asilreslea kvavfgdfsp evaetyrllg vadlaqgnqt gahkklkkcl qiqtllygpq
      361 dkrtlatqqt mdipskapev parprpspga kaafcaggrp hsvpgrarps aad
//
LOCUS       XP_061014593             163 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/arginine-rich splicing factor 3-like [Dama dama].
ACCESSION   XP_061014593
VERSION     XP_061014593.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158610.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..163
                     /product="serine/arginine-rich splicing factor 3-like"
                     /calculated_mol_wt=18936
     Region          6..86
                     /region_name="RRM_SRSF3"
                     /note="RNA recognition motif (RRM) found in vertebrate
                     serine/arginine-rich splicing factor 3 (SRSF3); cd12645"
                     /db_xref="CDD:241089"
     Site            order(40,42..44,46,48,50,81,83)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:241089"
     CDS             1..163
                     /gene="LOC133067741"
                     /coded_by="XM_061158610.1:109..600"
                     /db_xref="GeneID:133067741"
ORIGIN      
        1 mhrdscpldc kvyvgnlgnn gnkteleraf gyygplrsvw varnppgfaf vefedprdaa
       61 davreldgrt lcgcrvrvel sngekrsrnr gpppwgrcpq ddyrrrsppp rrrssrqrsf
      121 srsrsrslsr drkrerslsq ernhkpsrsf srsrsrsrsn erk
//
LOCUS       XP_061014594            1367 aa            linear   MAM 02-DEC-2023
DEFINITION  insulin-like growth factor 1 receptor [Dama dama].
ACCESSION   XP_061014594
VERSION     XP_061014594.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158611.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1367
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1367
                     /product="insulin-like growth factor 1 receptor"
                     /calculated_mol_wt=154760
     Region          51..161
                     /region_name="Recep_L_domain"
                     /note="Receptor L domain; pfam01030"
                     /db_xref="CDD:460032"
     Region          175..330
                     /region_name="Furin-like"
                     /note="Furin-like cysteine rich region; pfam00757"
                     /db_xref="CDD:395614"
     Region          352..467
                     /region_name="Recep_L_domain"
                     /note="Receptor L domain; pfam01030"
                     /db_xref="CDD:460032"
     Region          494..606
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(595..596,598..599)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          611..>654
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Region          835..924
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(913..914,916..917)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          992..1268
                     /region_name="PTKc_InsR_like"
                     /note="Catalytic domain of Insulin Receptor-like Protein
                     Tyrosine Kinases; cd05032"
                     /db_xref="CDD:173625"
     Site            order(1005,1007..1009,1013,1031,1033,1080,1082,1086,1135,
                     1139..1140,1142,1153,1170..1172,1174..1175,1184,1186,1218)
                     /site_type="active"
                     /db_xref="CDD:173625"
     Site            order(1005,1007..1009,1013,1031,1033,1080,1082,1086,1140,
                     1142,1153)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:173625"
     Site            order(1135,1139,1170..1172,1174..1175,1184,1186,1218)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:173625"
     Site            1152..1177
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:173625"
     CDS             1..1367
                     /gene="IGF1R"
                     /coded_by="XM_061158611.1:152..4255"
                     /db_xref="GeneID:133067742"
ORIGIN      
        1 mksssgggsp tslwgllffs aalslwptsg eicgpgidir ndyqqlkrle nctviegylh
       61 illiskaedy rsyrfpkltv iteylllfrv agleslgdlf pnltvirgwk lfynyalvif
      121 emtnlkdigl ynlrnitrga irieknadlc ylstvdwsli ldavsnnyiv gnkppkecgd
      181 lcpgtmeekp lcekttinne ynyrcwttnr cqkmcpsacg kractethec chpeclgscs
      241 apdnatacva crhyyyagvc vpscppstyr fegwrcvdrd fcanipnaes sdsegfvihd
      301 gecmqecpsg firngsqsmy cipcegpcpk vceeekktkt idsvtsaqml qgctifkgnl
      361 linirrgnni aselenfmgl ievvtgyvki rhshalvsls flknlrqilg eeqlegnysf
      421 yvldnqnlqq lwdwdhrnlt ikagkmyfaf npklcvseiy rmeevtgtkg rqskgdintr
      481 nngerasces dvlhftsttt wknriiitwh ryrppdyrdl isftvyykea pfknvteydg
      541 qdacgsnswn mvdvdlppnk dvepgillhg lkpwtqyavy vkavtltmve ndhirgakse
      601 ilyirtnasv psipldvlsa snsssqlivk wnppslpngn lsyyivrwqr qpqdsylyrh
      661 nycskdkipi rkyadgtidv eevtenpkte vcggekgpcc acpkteaekq aekeeaeyrk
      721 vfenflhnai fvprperkrr evmqianttv ssrsrnttvl dtynitdpee leteypffes
      781 rvdnkertvi snlrpftlyr idihscnhea eklgcsasnf vfartmpaeg addipgpvtw
      841 eprpensifl kwpepenpng lilmyeikyg sqvedqrecv srqeyrkygg aklnrlnpgn
      901 ytariqatsl sgngswtdpv ffyvqaktty enfihliial piavllivgg llmmlyvfhr
      961 krnssrlgng vlyasvnpey fsaadvyvpd ewevarekit msrelgqgsf gmvyegvakg
     1021 vvkdepetrv aiktvneaas mrerieflne asvmkefnch hvvrllgvvs qgqptlvime
     1081 lmtrgdlksy lrslrpemen npvlappsls kmiqmageia dgmaylnank fvhrdlaarn
     1141 cmvaedftvk igdfgmtrdi yetdyyrkgg kgllpvrwms peslkdgvft thsdvwsfgv
     1201 vlweiatlae qpyqglsneq vlrfvmeggl ldkpdncpdm lfelmrmcwq ynpkmrpsfl
     1261 eiissvkdem eagfrevsfy yseenkppep eeldlepenm esvpldpsas aaslplpdrh
     1321 sghkaengpg pgvlvlrasf derqpyahmn ggrkneralp lpqsstc
//
LOCUS       XP_061014595             413 aa            linear   MAM 02-DEC-2023
DEFINITION  arrestin domain-containing protein 4 [Dama dama].
ACCESSION   XP_061014595
VERSION     XP_061014595.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158612.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..413
                     /product="arrestin domain-containing protein 4"
                     /calculated_mol_wt=44536
     Region          23..164
                     /region_name="Arrestin_N"
                     /note="Arrestin (or S-antigen), N-terminal domain;
                     pfam00339"
                     /db_xref="CDD:425619"
     Region          186..313
                     /region_name="Arrestin_C"
                     /note="Arrestin (or S-antigen), C-terminal domain;
                     smart01017"
                     /db_xref="CDD:214976"
     CDS             1..413
                     /gene="ARRDC4"
                     /coded_by="XM_061158612.1:1..1242"
                     /db_xref="GeneID:133067743"
ORIGIN      
        1 mggeagsaaa aagfegrvks lglvfederk gcyssgetva ghvlleaaep valralrlea
       61 qgrataawgp sagaaapaaa seveylnvrl slreppageg illlqpgkhe fpfsfqlpse
      121 plvtsftgky gsiqycvrav lerpqapdqs vkrelqvvsh idvntpallt pvlktqekmv
      181 gcwfftsgpv slsakierkg ycngeaipiy aeiencssrl ivpkaaifqt qtylasgktk
      241 tvrlmvanvr gnhiasgstd twngktlkip pvtpsildcc iirvdyslav yihipgakkl
      301 mlelplvigt vpyngfgsrn ssvasqfimd mswltltlpe qpeappnyad vvseeefsrh
      361 vppypqppnc egesccpmfa ciqefrfqpp plyseidphp sdveesqpvs fil
//
LOCUS       XP_061014597             414 aa            linear   MAM 02-DEC-2023
DEFINITION  COUP transcription factor 2 isoform X1 [Dama dama].
ACCESSION   XP_061014597
VERSION     XP_061014597.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158614.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..414
                     /product="COUP transcription factor 2 isoform X1"
                     /calculated_mol_wt=45396
     Region          79..151
                     /region_name="NR_DBD_COUP_TF"
                     /note="DNA-binding domain of chicken ovalbumin upstream
                     promoter transcription factors (COUP-TFs) is composed of
                     two C4-type zinc fingers; cd06958"
                     /db_xref="CDD:143516"
     Site            order(79,82,96,99,115,121,131,134)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143516"
     Site            order(88..91,97..98,100,102,105,108,116,128..129,132,135,
                     146)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143516"
     Region          177..411
                     /region_name="NR_LBD_COUP-TF"
                     /note="Ligand binding domain of chicken ovalbumin upstream
                     promoter transcription factors, a member of the nuclear
                     receptor family; cd06948"
                     /db_xref="CDD:132746"
     Site            order(211..212,216,250,254,257,271,292)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:132746"
     Site            order(221,224,228,233,238..239,241..242,245..246)
                     /site_type="active"
                     /note="putative coactivator recognition site [active]"
                     /db_xref="CDD:132746"
     CDS             1..414
                     /gene="NR2F2"
                     /coded_by="XM_061158614.1:808..2052"
                     /db_xref="GeneID:133067744"
ORIGIN      
        1 mamvvstwrd pqdevpgsqg sqasqappvp gpppgaphtp qtpgqggpas tpaqtaaggq
       61 ggpggpggdk qqqqqhiecv vcgdkssgkh ygqftcegck sffkrsvrrn lsytcranrn
      121 cpidqhhrnq cqycrlkkcl kvgmrreavq rgrmpptqps hgqfaltngd plnchsylsg
      181 yislllraep yptsrfgsqc mqpnnimgie nicelaarml fsavewarni pffpdlqitd
      241 qvallrltws elfvlnaaqc smplhvapll aaaglhaspm sadrvvafmd hirifqeqve
      301 klkalhvdsa eysclkaivl ftsdacglsd vahveslqek sqcaleeyvr sqypnqptrf
      361 gklllrlpsl rtvsssvieq lffvrlvgkt pietlirdml lsgssfnwpy maiq
//
LOCUS       XP_061014598             281 aa            linear   MAM 02-DEC-2023
DEFINITION  COUP transcription factor 2 isoform X2 [Dama dama].
ACCESSION   XP_061014598
VERSION     XP_061014598.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158615.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..281
                     /product="COUP transcription factor 2 isoform X2"
                     /calculated_mol_wt=31339
     Region          44..278
                     /region_name="NR_LBD_COUP-TF"
                     /note="Ligand binding domain of chicken ovalbumin upstream
                     promoter transcription factors, a member of the nuclear
                     receptor family; cd06948"
                     /db_xref="CDD:132746"
     Site            order(78..79,83,117,121,124,138,159)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:132746"
     Site            order(88,91,95,100,105..106,108..109,112..113)
                     /site_type="active"
                     /note="putative coactivator recognition site [active]"
                     /db_xref="CDD:132746"
     CDS             1..281
                     /gene="NR2F2"
                     /coded_by="XM_061158615.1:509..1354"
                     /db_xref="GeneID:133067744"
ORIGIN      
        1 mqavwdleqg kygfavqrgr mpptqpshgq faltngdpln chsylsgyis lllraepypt
       61 srfgsqcmqp nnimgienic elaarmlfsa vewarnipff pdlqitdqva llrltwself
      121 vlnaaqcsmp lhvapllaaa glhaspmsad rvvafmdhir ifqeqveklk alhvdsaeys
      181 clkaivlfts dacglsdvah veslqeksqc aleeyvrsqy pnqptrfgkl llrlpslrtv
      241 sssvieqlff vrlvgktpie tlirdmllsg ssfnwpymai q
//
LOCUS       XP_061014599             879 aa            linear   MAM 02-DEC-2023
DEFINITION  multiple C2 and transmembrane domain-containing protein 2 isoform
            X1 [Dama dama].
ACCESSION   XP_061014599
VERSION     XP_061014599.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158616.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..879
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..879
                     /product="multiple C2 and transmembrane domain-containing
                     protein 2 isoform X1"
                     /calculated_mol_wt=99186
     Region          196..315
                     /region_name="C2A_MCTP_PRT"
                     /note="C2 domain first repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); cd04042"
                     /db_xref="CDD:176007"
     Site            order(211,217,264,266,271)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176007"
     Region          358..470
                     /region_name="C2B_MCTP_PRT"
                     /note="C2 domain second repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); cd08376"
                     /db_xref="CDD:176022"
     Site            order(376,423,425,431)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176022"
     Region          510..628
                     /region_name="C2C_MCTP_PRT"
                     /note="C2 domain third repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); cd08377"
                     /db_xref="CDD:176023"
     Site            order(526,532,578,580,586)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176023"
     Region          <772..>825
                     /region_name="PRT_C"
                     /note="Plant phosphoribosyltransferase C-terminal;
                     pfam08372"
                     /db_xref="CDD:337028"
     CDS             1..879
                     /gene="MCTP2"
                     /coded_by="XM_061158616.1:322..2961"
                     /db_xref="GeneID:133067747"
ORIGIN      
        1 mdldkpsvwg sfkqrtrpll vnlskrkvkk tsskaldlra qhhldrrlsl svpdlleaea
       61 lapagrpysg pqssytsvps slstagivpk ssssslkqse eeldwsqeev gpfqvgetdp
      121 eepftspakd rrassngslg llqktppged apegpeklcg sgdlnaalts qhfkeqsglr
      181 eagdglsnlp spfaylltih lkegrnlvvr drcgtsdpyv kfklngktly kskviyknln
      241 pvwdeivvlp iqsldqklrv kvydrdltts dfmgsafvil sdlelnrtte hilkledpns
      301 leddmgvivl nlnlvvkqcd fkrhrwsnrk rlsaskssli rnlrlseslk knqlwngiis
      361 itllegrnvs ggsvaemfvq lklgdqryks ktlcksanpq wreqfdfhyf sdrmgildie
      421 vwgkdskkhe erlgtckvdi salplkqanc lelplesclg tllmlvtltp csgvsvsdlc
      481 vcpladpser kqiaqrfclq nslkdmkdvg ilqvkvlkav dllaadfsgk sdpfcllelg
      541 ndrlqthtiy knlnpewnkv ftfpvkdihd vlevtvfded gdkppdflgk vaipllsird
      601 gqtncyvlkn kdleqafkgv iylemdliyn pikasirtft prekrfvedg rklskkilsr
      661 dvdrvkrltm amwntiqflk scfqwestlr stvafmvflv tvwnfelymi plallllfvy
      721 nsigtvrgkg gsiqdsqesp dmdeeededd kesekkglie riymvqdivs tvqnileela
      781 sfgerikntf nwtvpflsfl aclilavatv tlyfiplryi iliwginkft kklrnpyaid
      841 nnelldflsr vpsdvqkvqy telkpgssqs pvrkkrnal
//
LOCUS       XP_061014600             879 aa            linear   MAM 02-DEC-2023
DEFINITION  multiple C2 and transmembrane domain-containing protein 2 isoform
            X1 [Dama dama].
ACCESSION   XP_061014600
VERSION     XP_061014600.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158617.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..879
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..879
                     /product="multiple C2 and transmembrane domain-containing
                     protein 2 isoform X1"
                     /calculated_mol_wt=99186
     Region          196..315
                     /region_name="C2A_MCTP_PRT"
                     /note="C2 domain first repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); cd04042"
                     /db_xref="CDD:176007"
     Site            order(211,217,264,266,271)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176007"
     Region          358..470
                     /region_name="C2B_MCTP_PRT"
                     /note="C2 domain second repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); cd08376"
                     /db_xref="CDD:176022"
     Site            order(376,423,425,431)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176022"
     Region          510..628
                     /region_name="C2C_MCTP_PRT"
                     /note="C2 domain third repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); cd08377"
                     /db_xref="CDD:176023"
     Site            order(526,532,578,580,586)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176023"
     Region          <772..>825
                     /region_name="PRT_C"
                     /note="Plant phosphoribosyltransferase C-terminal;
                     pfam08372"
                     /db_xref="CDD:337028"
     CDS             1..879
                     /gene="MCTP2"
                     /coded_by="XM_061158617.1:434..3073"
                     /db_xref="GeneID:133067747"
ORIGIN      
        1 mdldkpsvwg sfkqrtrpll vnlskrkvkk tsskaldlra qhhldrrlsl svpdlleaea
       61 lapagrpysg pqssytsvps slstagivpk ssssslkqse eeldwsqeev gpfqvgetdp
      121 eepftspakd rrassngslg llqktppged apegpeklcg sgdlnaalts qhfkeqsglr
      181 eagdglsnlp spfaylltih lkegrnlvvr drcgtsdpyv kfklngktly kskviyknln
      241 pvwdeivvlp iqsldqklrv kvydrdltts dfmgsafvil sdlelnrtte hilkledpns
      301 leddmgvivl nlnlvvkqcd fkrhrwsnrk rlsaskssli rnlrlseslk knqlwngiis
      361 itllegrnvs ggsvaemfvq lklgdqryks ktlcksanpq wreqfdfhyf sdrmgildie
      421 vwgkdskkhe erlgtckvdi salplkqanc lelplesclg tllmlvtltp csgvsvsdlc
      481 vcpladpser kqiaqrfclq nslkdmkdvg ilqvkvlkav dllaadfsgk sdpfcllelg
      541 ndrlqthtiy knlnpewnkv ftfpvkdihd vlevtvfded gdkppdflgk vaipllsird
      601 gqtncyvlkn kdleqafkgv iylemdliyn pikasirtft prekrfvedg rklskkilsr
      661 dvdrvkrltm amwntiqflk scfqwestlr stvafmvflv tvwnfelymi plallllfvy
      721 nsigtvrgkg gsiqdsqesp dmdeeededd kesekkglie riymvqdivs tvqnileela
      781 sfgerikntf nwtvpflsfl aclilavatv tlyfiplryi iliwginkft kklrnpyaid
      841 nnelldflsr vpsdvqkvqy telkpgssqs pvrkkrnal
//
LOCUS       XP_061014601             867 aa            linear   MAM 02-DEC-2023
DEFINITION  multiple C2 and transmembrane domain-containing protein 2 isoform
            X2 [Dama dama].
ACCESSION   XP_061014601
VERSION     XP_061014601.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158618.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..867
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..867
                     /product="multiple C2 and transmembrane domain-containing
                     protein 2 isoform X2"
                     /calculated_mol_wt=97715
     Region          196..315
                     /region_name="C2A_MCTP_PRT"
                     /note="C2 domain first repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); cd04042"
                     /db_xref="CDD:176007"
     Site            order(211,217,264,266,271)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176007"
     Region          346..458
                     /region_name="C2B_MCTP_PRT"
                     /note="C2 domain second repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); cd08376"
                     /db_xref="CDD:176022"
     Site            order(364,411,413,419)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176022"
     Region          498..616
                     /region_name="C2C_MCTP_PRT"
                     /note="C2 domain third repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); cd08377"
                     /db_xref="CDD:176023"
     Site            order(514,520,566,568,574)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176023"
     Region          <760..>813
                     /region_name="PRT_C"
                     /note="Plant phosphoribosyltransferase C-terminal;
                     pfam08372"
                     /db_xref="CDD:337028"
     CDS             1..867
                     /gene="MCTP2"
                     /coded_by="XM_061158618.1:322..2925"
                     /db_xref="GeneID:133067747"
ORIGIN      
        1 mdldkpsvwg sfkqrtrpll vnlskrkvkk tsskaldlra qhhldrrlsl svpdlleaea
       61 lapagrpysg pqssytsvps slstagivpk ssssslkqse eeldwsqeev gpfqvgetdp
      121 eepftspakd rrassngslg llqktppged apegpeklcg sgdlnaalts qhfkeqsglr
      181 eagdglsnlp spfaylltih lkegrnlvvr drcgtsdpyv kfklngktly kskviyknln
      241 pvwdeivvlp iqsldqklrv kvydrdltts dfmgsafvil sdlelnrtte hilkledpns
      301 leddmgvivl nlnlvvkqcd fkrhsslirn lrlseslkkn qlwngiisit llegrnvsgg
      361 svaemfvqlk lgdqrykskt lcksanpqwr eqfdfhyfsd rmgildievw gkdskkheer
      421 lgtckvdisa lplkqancle lplesclgtl lmlvtltpcs gvsvsdlcvc pladpserkq
      481 iaqrfclqns lkdmkdvgil qvkvlkavdl laadfsgksd pfcllelgnd rlqthtiykn
      541 lnpewnkvft fpvkdihdvl evtvfdedgd kppdflgkva ipllsirdgq tncyvlknkd
      601 leqafkgviy lemdliynpi kasirtftpr ekrfvedgrk lskkilsrdv drvkrltmam
      661 wntiqflksc fqwestlrst vafmvflvtv wnfelymipl allllfvyns igtvrgkggs
      721 iqdsqespdm deeededdke sekkglieri ymvqdivstv qnileelasf gerikntfnw
      781 tvpflsflac lilavatvtl yfiplryiil iwginkftkk lrnpyaidnn elldflsrvp
      841 sdvqkvqyte lkpgssqspv rkkrnal
//
LOCUS       XP_061014602             838 aa            linear   MAM 02-DEC-2023
DEFINITION  multiple C2 and transmembrane domain-containing protein 2 isoform
            X3 [Dama dama].
ACCESSION   XP_061014602
VERSION     XP_061014602.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158619.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..838
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..838
                     /product="multiple C2 and transmembrane domain-containing
                     protein 2 isoform X3"
                     /calculated_mol_wt=94600
     Region          196..315
                     /region_name="C2A_MCTP_PRT"
                     /note="C2 domain first repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); cd04042"
                     /db_xref="CDD:176007"
     Site            order(211,217,264,266,271)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176007"
     Region          358..470
                     /region_name="C2B_MCTP_PRT"
                     /note="C2 domain second repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); cd08376"
                     /db_xref="CDD:176022"
     Site            order(376,423,425,431)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176022"
     Region          510..628
                     /region_name="C2C_MCTP_PRT"
                     /note="C2 domain third repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); cd08377"
                     /db_xref="CDD:176023"
     Site            order(526,532,578,580,586)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176023"
     Region          <731..>784
                     /region_name="PRT_C"
                     /note="Plant phosphoribosyltransferase C-terminal;
                     pfam08372"
                     /db_xref="CDD:337028"
     CDS             1..838
                     /gene="MCTP2"
                     /coded_by="XM_061158619.1:322..2838"
                     /db_xref="GeneID:133067747"
ORIGIN      
        1 mdldkpsvwg sfkqrtrpll vnlskrkvkk tsskaldlra qhhldrrlsl svpdlleaea
       61 lapagrpysg pqssytsvps slstagivpk ssssslkqse eeldwsqeev gpfqvgetdp
      121 eepftspakd rrassngslg llqktppged apegpeklcg sgdlnaalts qhfkeqsglr
      181 eagdglsnlp spfaylltih lkegrnlvvr drcgtsdpyv kfklngktly kskviyknln
      241 pvwdeivvlp iqsldqklrv kvydrdltts dfmgsafvil sdlelnrtte hilkledpns
      301 leddmgvivl nlnlvvkqcd fkrhrwsnrk rlsaskssli rnlrlseslk knqlwngiis
      361 itllegrnvs ggsvaemfvq lklgdqryks ktlcksanpq wreqfdfhyf sdrmgildie
      421 vwgkdskkhe erlgtckvdi salplkqanc lelplesclg tllmlvtltp csgvsvsdlc
      481 vcpladpser kqiaqrfclq nslkdmkdvg ilqvkvlkav dllaadfsgk sdpfcllelg
      541 ndrlqthtiy knlnpewnkv ftfpvkdihd vlevtvfded gdkppdflgk vaipllsird
      601 gqtncyvlkn kdleqafkgv iylemdliyn pikasirtft prekrfvedg rklskkilsr
      661 dvdrvkrltm amwntiqflk scfqwestlr stvafmespd mdeeededdk esekkglier
      721 iymvqdivst vqnileelas fgerikntfn wtvpflsfla clilavatvt lyfiplryii
      781 liwginkftk klrnpyaidn nelldflsrv psdvqkvqyt elkpgssqsp vrkkrnal
//
LOCUS       XP_061014603             466 aa            linear   MAM 02-DEC-2023
DEFINITION  multiple C2 and transmembrane domain-containing protein 2 isoform
            X4 [Dama dama].
ACCESSION   XP_061014603
VERSION     XP_061014603.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158620.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..466
                     /product="multiple C2 and transmembrane domain-containing
                     protein 2 isoform X4"
                     /calculated_mol_wt=52974
     Region          <1..57
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     Region          97..215
                     /region_name="C2C_MCTP_PRT"
                     /note="C2 domain third repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); cd08377"
                     /db_xref="CDD:176023"
     Site            order(113,119,165,167,173)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176023"
     Region          <359..>412
                     /region_name="PRT_C"
                     /note="Plant phosphoribosyltransferase C-terminal;
                     pfam08372"
                     /db_xref="CDD:337028"
     CDS             1..466
                     /gene="MCTP2"
                     /coded_by="XM_061158620.1:141..1541"
                     /db_xref="GeneID:133067747"
ORIGIN      
        1 mgildievwg kdskkheerl gtckvdisal plkqanclel plesclgtll mlvtltpcsg
       61 vsvsdlcvcp ladpserkqi aqrfclqnsl kdmkdvgilq vkvlkavdll aadfsgksdp
      121 fcllelgndr lqthtiyknl npewnkvftf pvkdihdvle vtvfdedgdk ppdflgkvai
      181 pllsirdgqt ncyvlknkdl eqafkgviyl emdliynpik asirtftpre krfvedgrkl
      241 skkilsrdvd rvkrltmamw ntiqflkscf qwestlrstv afmvflvtvw nfelymipla
      301 llllfvynsi gtvrgkggsi qdsqespdmd eeededdkes ekkglieriy mvqdivstvq
      361 nileelasfg erikntfnwt vpflsflacl ilavatvtly fiplryiili wginkftkkl
      421 rnpyaidnne lldflsrvps dvqkvqytel kpgssqspvr kkrnal
//
LOCUS       XP_061014604             455 aa            linear   MAM 02-DEC-2023
DEFINITION  repulsive guidance molecule A [Dama dama].
ACCESSION   XP_061014604
VERSION     XP_061014604.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158621.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..455
                     /product="repulsive guidance molecule A"
                     /calculated_mol_wt=49300
     Region          48..221
                     /region_name="RGM_N"
                     /note="Repulsive guidance molecule (RGM) N-terminus;
                     pfam06535"
                     /db_xref="CDD:461940"
     Region          226..407
                     /region_name="RGM_C"
                     /note="Repulsive guidance molecule (RGM) C-terminus;
                     pfam06534"
                     /db_xref="CDD:461939"
     CDS             1..455
                     /gene="RGMA"
                     /coded_by="XM_061158621.1:96..1463"
                     /db_xref="GeneID:133067749"
ORIGIN      
        1 mqpprerlvv tgragwmgmg rgadrpalgf wptlafllcs fpaasfscki lkcnsefwsa
       61 tagshapaad dapefcaalr tyalctrrta rtcrgdlayh savhgiedlm sqhncskdgp
      121 tsqphlrtlp ppgdsqersd speichyeks fhnraaapny thcglfgdph lrtftdrfqt
      181 ckvqgawpli dnnylnvqvt ntpvlpgsaa tatskltiif knfqecvdqk vyqaemdelp
      241 aafadgskng gdkhganslk itekvsgqhv eiqakyigtt ivvrqvgryl tfavrmpeev
      301 vnavedrdsq glylclrgcp lnqqidfqaf ragaaegpga pqppaaspap papdtfpyet
      361 avakckeklp vedlyyqacv fdllttgdvn ftlaayyale dvkmlhsnkd klhlyartre
      421 ppgragaapg pplapwpllg tllllallps lpgaa
//
LOCUS       XP_061014605            1827 aa            linear   MAM 02-DEC-2023
DEFINITION  chromodomain-helicase-DNA-binding protein 2 isoform X1 [Dama dama].
ACCESSION   XP_061014605
VERSION     XP_061014605.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158622.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1827
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1827
                     /product="chromodomain-helicase-DNA-binding protein 2
                     isoform X1"
                     /calculated_mol_wt=210998
     Region          258..342
                     /region_name="CD1_tandem_CHD1-2_like"
                     /note="repeat 1 of the paired tandem chromodomains of
                     chromodomain helicase DNA-binding protein 1 and 2, and
                     similar proteins; cd18666"
                     /db_xref="CDD:349313"
     Site            order(260,310,312..313,317)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349313"
     Region          375..446
                     /region_name="CD2_tandem_CHD1-2_like"
                     /note="repeat 2 of the paired tandem chromodomains of
                     chromodomain helicase DNA-binding protein 1 and 2, and
                     similar proteins; cd18661"
                     /db_xref="CDD:349308"
     Site            order(411,428)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349308"
     Region          463..699
                     /region_name="DEXHc_CHD2"
                     /note="DEAH-box helicase domain of the chromodomain
                     helicase DNA binding protein 2; cd18054"
                     /db_xref="CDD:350812"
     Region          467..>1053
                     /region_name="PLN03142"
                     /note="Probable chromatin-remodeling complex ATPase chain;
                     Provisional"
                     /db_xref="CDD:215601"
     Site            order(510..516,550,616..617)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350812"
     Region          1129..1217
                     /region_name="CDH1_2_SANT_HL1"
                     /note="CDH1/2 SANT-Helical linker 1; pfam18375"
                     /db_xref="CDD:465731"
     Region          1470..1552
                     /region_name="DUF4208"
                     /note="Domain of unknown function (DUF4208); pfam13907"
                     /db_xref="CDD:464035"
     CDS             1..1827
                     /gene="CHD2"
                     /coded_by="XM_061158622.1:605..6088"
                     /db_xref="GeneID:133067750"
ORIGIN      
        1 mmrnkdksqe edsslhsnas shsaseeasg sdsgsqsese qgsdpgsghg sesnsssess
       61 esqseseses agsksqpvlp eakekpaskk eriadvkkmw eeypdvygvr rsnrsrqeps
      121 rfnikeeass gsesgspkrr gqrqlkkqek wkrelsedeq eqgtsaesep eqtvrarrpv
      181 prrtvpkprv kkqpktqrgk rkkqdssdde deddeapkrq trrraaknvs ykedddfetd
      241 sddliemtge gvdeqqdnse tiekvldsrl gkkgatgast tvyaveangd pssdfdpekd
      301 egevqylikw kgwsyihstw eseeslqqqk vkglkklenf kkkedeikqw lgkvspedve
      361 yfncqqelas elnkqyqive rviavktsks tlgqtdfpah srkpapsnep eylckwmglp
      421 ysecswedea ligkkfqsci dsfhsrnnsk tiptreckal kqrprfvalk kqpaylggen
      481 lelrdyqleg lnwlahswck snsviladem glgktiqtis flsylfhqhq lygpflivvp
      541 lstltswqre feiwapeinv vvyigdlmsr ntireyewih sqtkrlkfna littyeillk
      601 dktvlgsinw aflgvdeahr lknddsllyk tlidfksnhr llitgtplqn slkelwsllh
      661 fimpekfefw edfeedhgkg rengyqslhk vlepfllrrv kkdvekslpa kveqilrvem
      721 salqkqyykw iltrnykala kgtrgstsgf lnivmelkkc cnhcylikpp eenerengqe
      781 illslirssg klilldkllt rlrergnrvl ifsqmvrmld ilaeyltikh ypfqrldgsi
      841 kgeirkqald hfnadgsedf cfllstragg lginlasadt vvifdsdwnp qndlqaqara
      901 hrigqkkqvn iyrlvtkgtv eeeiierakk kmvldhlviq rmdttgrtvl ennsgrsnsn
      961 pfnkeeltai lkfgaedlfk elegeesepq emdideilrl aetrenevst satdellsqf
     1021 kvanfatmed eeelderphk dwdeiipeeq rkkveeeerq keleeiymlp rirsstkkaq
     1081 tndsdsdtes krqaqrssas esetddsddd kkpkrrgrpr svrkdlvegf tdaeirrfik
     1141 aykkfglple rleciardae lvdksvadlk rlgelihnsc vsamqeyeeq lkenasegkg
     1201 pgkkrgptik isgvqvnvks iiqheeefem lhksipvdpe ekkkyclscr vkaahfdvew
     1261 gveddsrlll giyehgygnw eliktdpelk ltdkilpmet dkkpqgkqlq tradyllkll
     1321 rkslekegtv tggeeaklkk rkprvkkenk aprlkdehgi efssprhsdn pseegevkdd
     1381 gleksptkkk qkkkenkenk ekqmssrkdk egdkerkksk dkkekpkggd akssskskrs
     1441 qgpvhitags epvpigedee ddldqetfsi ckermrpvkk alkqldkpdk glsvqeqleh
     1501 trncllkigd riaeclkays dqehvklwrr nlwifvskft efdarklhkl ykmahkkrsq
     1561 eeeeqkkked viggkkpfrp easgssrdsl msqshtphnl hpqkphlpas hgpqmhghpr
     1621 dnynhpnkrh fstadrgdwq rerkfnyggg nnnppwgsdr hhqyeqhwyk dhhygdrrhm
     1681 dahrsgsyrp nslsrkrpyd qyssdrdhrg hrdyydrhhh dskrrrsdef rpqnyhqqdf
     1741 rrmsdhrppm gyhgqgpsdh hrsfhtdklg eykqplpplh pavsdprspp sqksphdsks
     1801 pldhrspler sleqknnpdy nwnvrkt
//
LOCUS       XP_061014606            1792 aa            linear   MAM 02-DEC-2023
DEFINITION  chromodomain-helicase-DNA-binding protein 2 isoform X2 [Dama dama].
ACCESSION   XP_061014606
VERSION     XP_061014606.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158623.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1792
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1792
                     /product="chromodomain-helicase-DNA-binding protein 2
                     isoform X2"
                     /calculated_mol_wt=206820
     Region          223..307
                     /region_name="CD1_tandem_CHD1-2_like"
                     /note="repeat 1 of the paired tandem chromodomains of
                     chromodomain helicase DNA-binding protein 1 and 2, and
                     similar proteins; cd18666"
                     /db_xref="CDD:349313"
     Site            order(225,275,277..278,282)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349313"
     Region          340..411
                     /region_name="CD2_tandem_CHD1-2_like"
                     /note="repeat 2 of the paired tandem chromodomains of
                     chromodomain helicase DNA-binding protein 1 and 2, and
                     similar proteins; cd18661"
                     /db_xref="CDD:349308"
     Site            order(376,393)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349308"
     Region          428..664
                     /region_name="DEXHc_CHD2"
                     /note="DEAH-box helicase domain of the chromodomain
                     helicase DNA binding protein 2; cd18054"
                     /db_xref="CDD:350812"
     Region          432..>1018
                     /region_name="PLN03142"
                     /note="Probable chromatin-remodeling complex ATPase chain;
                     Provisional"
                     /db_xref="CDD:215601"
     Site            order(475..481,515,581..582)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350812"
     Region          1094..1182
                     /region_name="CDH1_2_SANT_HL1"
                     /note="CDH1/2 SANT-Helical linker 1; pfam18375"
                     /db_xref="CDD:465731"
     Region          1435..1517
                     /region_name="DUF4208"
                     /note="Domain of unknown function (DUF4208); pfam13907"
                     /db_xref="CDD:464035"
     CDS             1..1792
                     /gene="CHD2"
                     /coded_by="XM_061158623.1:603..5981"
                     /db_xref="GeneID:133067750"
ORIGIN      
        1 mmrnkdksqe edsslhsnas shsaseeasg sdsgsqsese qgsdpgsghg sesnsssess
       61 esqseseses agsksqpvlp eakekpaskk eriadvkkmw eeypdvygvr rsnrsrqeps
      121 rfnikeeass gsesgspkrr gqrqlkkqtv pkprvkkqpk tqrgkrkkqd ssddededde
      181 apkrqtrrra aknvsykedd dfetdsddli emtgegvdeq qdnsetiekv ldsrlgkkga
      241 tgasttvyav eangdpssdf dpekdegevq ylikwkgwsy ihstwesees lqqqkvkglk
      301 klenfkkked eikqwlgkvs pedveyfncq qelaselnkq yqiverviav ktskstlgqt
      361 dfpahsrkpa psnepeylck wmglpysecs wedealigkk fqscidsfhs rnnsktiptr
      421 eckalkqrpr fvalkkqpay lggenlelrd yqleglnwla hswcksnsvi lademglgkt
      481 iqtisflsyl fhqhqlygpf livvplstlt swqrefeiwa peinvvvyig dlmsrntire
      541 yewihsqtkr lkfnalitty eillkdktvl gsinwaflgv deahrlkndd sllyktlidf
      601 ksnhrllitg tplqnslkel wsllhfimpe kfefwedfee dhgkgrengy qslhkvlepf
      661 llrrvkkdve kslpakveqi lrvemsalqk qyykwiltrn ykalakgtrg stsgflnivm
      721 elkkccnhcy likppeener engqeillsl irssgklill dklltrlrer gnrvlifsqm
      781 vrmldilaey ltikhypfqr ldgsikgeir kqaldhfnad gsedfcflls tragglginl
      841 asadtvvifd sdwnpqndlq aqarahrigq kkqvniyrlv tkgtveeeii erakkkmvld
      901 hlviqrmdtt grtvlennsg rsnsnpfnke eltailkfga edlfkelege esepqemdid
      961 eilrlaetre nevstsatde llsqfkvanf atmedeeeld erphkdwdei ipeeqrkkve
     1021 eeerqkelee iymlprirss tkkaqtndsd sdteskrqaq rssasesetd dsdddkkpkr
     1081 rgrprsvrkd lvegftdaei rrfikaykkf glplerleci ardaelvdks vadlkrlgel
     1141 ihnscvsamq eyeeqlkena segkgpgkkr gptikisgvq vnvksiiqhe eefemlhksi
     1201 pvdpeekkky clscrvkaah fdvewgvedd srlllgiyeh gygnwelikt dpelkltdki
     1261 lpmetdkkpq gkqlqtrady llkllrksle kegtvtggee aklkkrkprv kkenkaprlk
     1321 dehgiefssp rhsdnpseeg evkddgleks ptkkkqkkke nkenkekqms srkdkegdke
     1381 rkkskdkkek pkggdaksss kskrsqgpvh itagsepvpi gedeeddldq etfsickerm
     1441 rpvkkalkql dkpdkglsvq eqlehtrncl lkigdriaec lkaysdqehv klwrrnlwif
     1501 vskftefdar klhklykmah kkrsqeeeeq kkkedviggk kpfrpeasgs srdslmsqsh
     1561 tphnlhpqkp hlpashgpqm hghprdnynh pnkrhfstad rgdwqrerkf nygggnnnpp
     1621 wgsdrhhqye qhwykdhhyg drrhmdahrs gsyrpnslsr krpydqyssd rdhrghrdyy
     1681 drhhhdskrr rsdefrpqny hqqdfrrmsd hrppmgyhgq gpsdhhrsfh tdklgeykqp
     1741 lpplhpavsd prsppsqksp hdskspldhr splersleqk nnpdynwnvr kt
//
LOCUS       XP_061014607            1729 aa            linear   MAM 02-DEC-2023
DEFINITION  chromodomain-helicase-DNA-binding protein 2 isoform X3 [Dama dama].
ACCESSION   XP_061014607
VERSION     XP_061014607.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158624.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1729
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1729
                     /product="chromodomain-helicase-DNA-binding protein 2
                     isoform X3"
                     /calculated_mol_wt=200840
     Region          160..244
                     /region_name="CD1_tandem_CHD1-2_like"
                     /note="repeat 1 of the paired tandem chromodomains of
                     chromodomain helicase DNA-binding protein 1 and 2, and
                     similar proteins; cd18666"
                     /db_xref="CDD:349313"
     Site            order(162,212,214..215,219)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349313"
     Region          277..348
                     /region_name="CD2_tandem_CHD1-2_like"
                     /note="repeat 2 of the paired tandem chromodomains of
                     chromodomain helicase DNA-binding protein 1 and 2, and
                     similar proteins; cd18661"
                     /db_xref="CDD:349308"
     Site            order(313,330)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349308"
     Region          365..601
                     /region_name="DEXHc_CHD2"
                     /note="DEAH-box helicase domain of the chromodomain
                     helicase DNA binding protein 2; cd18054"
                     /db_xref="CDD:350812"
     Region          369..>955
                     /region_name="PLN03142"
                     /note="Probable chromatin-remodeling complex ATPase chain;
                     Provisional"
                     /db_xref="CDD:215601"
     Site            order(412..418,452,518..519)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350812"
     Region          1031..1119
                     /region_name="CDH1_2_SANT_HL1"
                     /note="CDH1/2 SANT-Helical linker 1; pfam18375"
                     /db_xref="CDD:465731"
     Region          1372..1454
                     /region_name="DUF4208"
                     /note="Domain of unknown function (DUF4208); pfam13907"
                     /db_xref="CDD:464035"
     CDS             1..1729
                     /gene="CHD2"
                     /coded_by="XM_061158624.1:137..5326"
                     /db_xref="GeneID:133067750"
ORIGIN      
        1 mweeypdvyg vrrsnrsrqe psrfnikeea ssgsesgspk rrgqrqlkkq ekwkrelsed
       61 eqeqgtsaes epeqtvrarr pvprrtvpkp rvkkqpktqr gkrkkqdssd dededdeapk
      121 rqtrrraakn vsykedddfe tdsddliemt gegvdeqqdn setiekvlds rlgkkgatga
      181 sttvyavean gdpssdfdpe kdegevqyli kwkgwsyihs tweseeslqq qkvkglkkle
      241 nfkkkedeik qwlgkvsped veyfncqqel aselnkqyqi verviavkts kstlgqtdfp
      301 ahsrkpapsn epeylckwmg lpysecswed ealigkkfqs cidsfhsrnn sktiptreck
      361 alkqrprfva lkkqpaylgg enlelrdyql eglnwlahsw cksnsvilad emglgktiqt
      421 isflsylfhq hqlygpfliv vplstltswq refeiwapei nvvvyigdlm srntireyew
      481 ihsqtkrlkf nalittyeil lkdktvlgsi nwaflgvdea hrlknddsll yktlidfksn
      541 hrllitgtpl qnslkelwsl lhfimpekfe fwedfeedhg kgrengyqsl hkvlepfllr
      601 rvkkdveksl pakveqilrv emsalqkqyy kwiltrnyka lakgtrgsts gflnivmelk
      661 kccnhcylik ppeenereng qeillslirs sgklilldkl ltrlrergnr vlifsqmvrm
      721 ldilaeylti khypfqrldg sikgeirkqa ldhfnadgse dfcfllstra gglginlasa
      781 dtvvifdsdw npqndlqaqa rahrigqkkq vniyrlvtkg tveeeiiera kkkmvldhlv
      841 iqrmdttgrt vlennsgrsn snpfnkeelt ailkfgaedl fkelegeese pqemdideil
      901 rlaetrenev stsatdells qfkvanfatm edeeelderp hkdwdeiipe eqrkkveeee
      961 rqkeleeiym lprirsstkk aqtndsdsdt eskrqaqrss asesetddsd ddkkpkrrgr
     1021 prsvrkdlve gftdaeirrf ikaykkfglp lerleciard aelvdksvad lkrlgelihn
     1081 scvsamqeye eqlkenaseg kgpgkkrgpt ikisgvqvnv ksiiqheeef emlhksipvd
     1141 peekkkycls crvkaahfdv ewgveddsrl llgiyehgyg nweliktdpe lkltdkilpm
     1201 etdkkpqgkq lqtradyllk llrkslekeg tvtggeeakl kkrkprvkke nkaprlkdeh
     1261 giefssprhs dnpseegevk ddgleksptk kkqkkkenke nkekqmssrk dkegdkerkk
     1321 skdkkekpkg gdaksssksk rsqgpvhita gsepvpiged eeddldqetf sickermrpv
     1381 kkalkqldkp dkglsvqeql ehtrncllki gdriaeclka ysdqehvklw rrnlwifvsk
     1441 ftefdarklh klykmahkkr sqeeeeqkkk edviggkkpf rpeasgssrd slmsqshtph
     1501 nlhpqkphlp ashgpqmhgh prdnynhpnk rhfstadrgd wqrerkfnyg ggnnnppwgs
     1561 drhhqyeqhw ykdhhygdrr hmdahrsgsy rpnslsrkrp ydqyssdrdh rghrdyydrh
     1621 hhdskrrrsd efrpqnyhqq dfrrmsdhrp pmgyhgqgps dhhrsfhtdk lgeykqplpp
     1681 lhpavsdprs ppsqksphds kspldhrspl ersleqknnp dynwnvrkt
//
LOCUS       XP_061014608             871 aa            linear   MAM 02-DEC-2023
DEFINITION  chromodomain-helicase-DNA-binding protein 2 isoform X4 [Dama dama].
ACCESSION   XP_061014608
VERSION     XP_061014608.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158625.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..871
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..871
                     /product="chromodomain-helicase-DNA-binding protein 2
                     isoform X4"
                     /calculated_mol_wt=99774
     Region          258..342
                     /region_name="CD1_tandem_CHD1-2_like"
                     /note="repeat 1 of the paired tandem chromodomains of
                     chromodomain helicase DNA-binding protein 1 and 2, and
                     similar proteins; cd18666"
                     /db_xref="CDD:349313"
     Site            order(260,310,312..313,317)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349313"
     Region          375..446
                     /region_name="CD2_tandem_CHD1-2_like"
                     /note="repeat 2 of the paired tandem chromodomains of
                     chromodomain helicase DNA-binding protein 1 and 2, and
                     similar proteins; cd18661"
                     /db_xref="CDD:349308"
     Site            order(411,428)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349308"
     Region          463..699
                     /region_name="DEXHc_CHD2"
                     /note="DEAH-box helicase domain of the chromodomain
                     helicase DNA binding protein 2; cd18054"
                     /db_xref="CDD:350812"
     Site            order(510..516,550,616..617)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350812"
     Region          789..>858
                     /region_name="SF2_C_SNF"
                     /note="C-terminal helicase domain of the SNF family
                     helicases; cd18793"
                     /db_xref="CDD:350180"
     CDS             1..871
                     /gene="CHD2"
                     /coded_by="XM_061158625.1:636..3251"
                     /db_xref="GeneID:133067750"
ORIGIN      
        1 mmrnkdksqe edsslhsnas shsaseeasg sdsgsqsese qgsdpgsghg sesnsssess
       61 esqseseses agsksqpvlp eakekpaskk eriadvkkmw eeypdvygvr rsnrsrqeps
      121 rfnikeeass gsesgspkrr gqrqlkkqek wkrelsedeq eqgtsaesep eqtvrarrpv
      181 prrtvpkprv kkqpktqrgk rkkqdssdde deddeapkrq trrraaknvs ykedddfetd
      241 sddliemtge gvdeqqdnse tiekvldsrl gkkgatgast tvyaveangd pssdfdpekd
      301 egevqylikw kgwsyihstw eseeslqqqk vkglkklenf kkkedeikqw lgkvspedve
      361 yfncqqelas elnkqyqive rviavktsks tlgqtdfpah srkpapsnep eylckwmglp
      421 ysecswedea ligkkfqsci dsfhsrnnsk tiptreckal kqrprfvalk kqpaylggen
      481 lelrdyqleg lnwlahswck snsviladem glgktiqtis flsylfhqhq lygpflivvp
      541 lstltswqre feiwapeinv vvyigdlmsr ntireyewih sqtkrlkfna littyeillk
      601 dktvlgsinw aflgvdeahr lknddsllyk tlidfksnhr llitgtplqn slkelwsllh
      661 fimpekfefw edfeedhgkg rengyqslhk vlepfllrrv kkdvekslpa kveqilrvem
      721 salqkqyykw iltrnykala kgtrgstsgf lnivmelkkc cnhcylikpp eenerengqe
      781 illslirssg klilldkllt rlrergnrvl ifsqmvrmld ilaeyltikh ypfqrldgsi
      841 kgeirkqald hfnadgsell tcksmislpa s
//
LOCUS       XP_061014609             603 aa            linear   MAM 02-DEC-2023
DEFINITION  chromodomain-helicase-DNA-binding protein 2 isoform X5 [Dama dama].
ACCESSION   XP_061014609
VERSION     XP_061014609.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158626.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..603
                     /product="chromodomain-helicase-DNA-binding protein 2
                     isoform X5"
                     /calculated_mol_wt=68641
     Region          258..342
                     /region_name="CD1_tandem_CHD1-2_like"
                     /note="repeat 1 of the paired tandem chromodomains of
                     chromodomain helicase DNA-binding protein 1 and 2, and
                     similar proteins; cd18666"
                     /db_xref="CDD:349313"
     Site            order(260,310,312..313,317)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349313"
     Region          375..446
                     /region_name="CD2_tandem_CHD1-2_like"
                     /note="repeat 2 of the paired tandem chromodomains of
                     chromodomain helicase DNA-binding protein 1 and 2, and
                     similar proteins; cd18661"
                     /db_xref="CDD:349308"
     Site            order(411,428)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349308"
     Region          463..>602
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            510..516
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     CDS             1..603
                     /gene="CHD2"
                     /coded_by="XM_061158626.1:635..2446"
                     /db_xref="GeneID:133067750"
ORIGIN      
        1 mmrnkdksqe edsslhsnas shsaseeasg sdsgsqsese qgsdpgsghg sesnsssess
       61 esqseseses agsksqpvlp eakekpaskk eriadvkkmw eeypdvygvr rsnrsrqeps
      121 rfnikeeass gsesgspkrr gqrqlkkqek wkrelsedeq eqgtsaesep eqtvrarrpv
      181 prrtvpkprv kkqpktqrgk rkkqdssdde deddeapkrq trrraaknvs ykedddfetd
      241 sddliemtge gvdeqqdnse tiekvldsrl gkkgatgast tvyaveangd pssdfdpekd
      301 egevqylikw kgwsyihstw eseeslqqqk vkglkklenf kkkedeikqw lgkvspedve
      361 yfncqqelas elnkqyqive rviavktsks tlgqtdfpah srkpapsnep eylckwmglp
      421 ysecswedea ligkkfqsci dsfhsrnnsk tiptreckal kqrprfvalk kqpaylggen
      481 lelrdyqleg lnwlahswck snsviladem glgktiqtis flsylfhqhq lygpflivvp
      541 lstltswqre feiwapeinv vvyigdlmsr ntireyewih sqtkrlkfna littyeillk
      601 dkv
//
LOCUS       XP_061014610             544 aa            linear   MAM 02-DEC-2023
DEFINITION  chromodomain-helicase-DNA-binding protein 2 isoform X6 [Dama dama].
ACCESSION   XP_061014610
VERSION     XP_061014610.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158627.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..544
                     /product="chromodomain-helicase-DNA-binding protein 2
                     isoform X6"
                     /calculated_mol_wt=61552
     Region          258..342
                     /region_name="CD1_tandem_CHD1-2_like"
                     /note="repeat 1 of the paired tandem chromodomains of
                     chromodomain helicase DNA-binding protein 1 and 2, and
                     similar proteins; cd18666"
                     /db_xref="CDD:349313"
     Site            order(260,310,312..313,317)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349313"
     Region          375..446
                     /region_name="CD2_tandem_CHD1-2_like"
                     /note="repeat 2 of the paired tandem chromodomains of
                     chromodomain helicase DNA-binding protein 1 and 2, and
                     similar proteins; cd18661"
                     /db_xref="CDD:349308"
     Site            order(411,428)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349308"
     Region          463..>532
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            510..516
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     CDS             1..544
                     /gene="CHD2"
                     /coded_by="XM_061158627.1:635..2269"
                     /db_xref="GeneID:133067750"
ORIGIN      
        1 mmrnkdksqe edsslhsnas shsaseeasg sdsgsqsese qgsdpgsghg sesnsssess
       61 esqseseses agsksqpvlp eakekpaskk eriadvkkmw eeypdvygvr rsnrsrqeps
      121 rfnikeeass gsesgspkrr gqrqlkkqek wkrelsedeq eqgtsaesep eqtvrarrpv
      181 prrtvpkprv kkqpktqrgk rkkqdssdde deddeapkrq trrraaknvs ykedddfetd
      241 sddliemtge gvdeqqdnse tiekvldsrl gkkgatgast tvyaveangd pssdfdpekd
      301 egevqylikw kgwsyihstw eseeslqqqk vkglkklenf kkkedeikqw lgkvspedve
      361 yfncqqelas elnkqyqive rviavktsks tlgqtdfpah srkpapsnep eylckwmglp
      421 ysecswedea ligkkfqsci dsfhsrnnsk tiptreckal kqrprfvalk kqpaylggen
      481 lelrdyqleg lnwlahswck snsviladem glgktiqtis flsylfhqhq lyenmngftl
      541 kpkg
//
LOCUS       XP_061014611             544 aa            linear   MAM 02-DEC-2023
DEFINITION  chromodomain-helicase-DNA-binding protein 2 isoform X6 [Dama dama].
ACCESSION   XP_061014611
VERSION     XP_061014611.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158628.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..544
                     /product="chromodomain-helicase-DNA-binding protein 2
                     isoform X6"
                     /calculated_mol_wt=61552
     Region          258..342
                     /region_name="CD1_tandem_CHD1-2_like"
                     /note="repeat 1 of the paired tandem chromodomains of
                     chromodomain helicase DNA-binding protein 1 and 2, and
                     similar proteins; cd18666"
                     /db_xref="CDD:349313"
     Site            order(260,310,312..313,317)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349313"
     Region          375..446
                     /region_name="CD2_tandem_CHD1-2_like"
                     /note="repeat 2 of the paired tandem chromodomains of
                     chromodomain helicase DNA-binding protein 1 and 2, and
                     similar proteins; cd18661"
                     /db_xref="CDD:349308"
     Site            order(411,428)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349308"
     Region          463..>532
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            510..516
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     CDS             1..544
                     /gene="CHD2"
                     /coded_by="XM_061158628.1:635..2269"
                     /db_xref="GeneID:133067750"
ORIGIN      
        1 mmrnkdksqe edsslhsnas shsaseeasg sdsgsqsese qgsdpgsghg sesnsssess
       61 esqseseses agsksqpvlp eakekpaskk eriadvkkmw eeypdvygvr rsnrsrqeps
      121 rfnikeeass gsesgspkrr gqrqlkkqek wkrelsedeq eqgtsaesep eqtvrarrpv
      181 prrtvpkprv kkqpktqrgk rkkqdssdde deddeapkrq trrraaknvs ykedddfetd
      241 sddliemtge gvdeqqdnse tiekvldsrl gkkgatgast tvyaveangd pssdfdpekd
      301 egevqylikw kgwsyihstw eseeslqqqk vkglkklenf kkkedeikqw lgkvspedve
      361 yfncqqelas elnkqyqive rviavktsks tlgqtdfpah srkpapsnep eylckwmglp
      421 ysecswedea ligkkfqsci dsfhsrnnsk tiptreckal kqrprfvalk kqpaylggen
      481 lelrdyqleg lnwlahswck snsviladem glgktiqtis flsylfhqhq lyenmngftl
      541 kpkg
//
LOCUS       XP_061014612             710 aa            linear   MAM 02-DEC-2023
DEFINITION  solute carrier organic anion transporter family member 3A1 isoform
            X1 [Dama dama].
ACCESSION   XP_061014612
VERSION     XP_061014612.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158629.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..710
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..710
                     /product="solute carrier organic anion transporter family
                     member 3A1 isoform X1"
                     /calculated_mol_wt=76482
     Region          39..563
                     /region_name="MFS_SLCO3_OATP3"
                     /note="Solute carrier organic anion transporter 3 family
                     of the Major Facilitator Superfamily of transporters;
                     cd17402"
                     /db_xref="CDD:340960"
     Site            order(53..54,57..58,61,93,191..192,194..196,199,219,
                     222..223,226,358,361..362,365..367,370,399,403,444..445,
                     449,453,506,509..510,513..514,517)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340960"
     CDS             1..710
                     /gene="SLCO3A1"
                     /coded_by="XM_061158629.1:66..2198"
                     /db_xref="GeneID:133067752"
ORIGIN      
        1 mqakkpggss gggrsgelqg deaqrnkkkk kkvscfsnik iflvsecalm laqgtvgayl
       61 vsvlttlerr fnlqsadvgv iassfeignl alilfvsyfg arghrprlig cggivmalga
      121 llsalpeflt hqykyeagei rwgaegrdvc aangsggdqg pdpdlicrsr tatnmmylll
      181 igaqvllgig atpvqplgvs yiddhvrrkd sslyigilft mlvfgpacgf ilgsfctkiy
      241 vdavfidtsn lditpddprw igawwggfll cgallffssv lmfgfpqslp phsdpalese
      301 qamlpereye rpkpsngvlr hplepdssas cfqqlrvipk vtkhllsnpv ftciilaacm
      361 eiavvagfaa flgkyleqqf nlttssanql lgmtaipcac lgiflggllv kklslsalga
      421 irmamlvnlv stacyvsflf lgcdtgpvag vtvpygnssm pgsaldpyss cnkncecqtd
      481 sftpvcgadg itylsacfag cnstnltgca clmtippena tvipgkcpsp gcqeafltfl
      541 cvmcvcsmig amaqtpsvii lirtvspelk syalgvlfll lrllgfippp lifgagidst
      601 clfwstfcge qgacalydnv ayrylyvsia ialksfafll ytttwqclrr nykryiknhe
      661 gglstseffa stltldnlgr dpvpanqthr tkfiynledh ewcenmesvl
//
LOCUS       XP_061014613             703 aa            linear   MAM 02-DEC-2023
DEFINITION  solute carrier organic anion transporter family member 3A1 isoform
            X2 [Dama dama].
ACCESSION   XP_061014613
VERSION     XP_061014613.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158630.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..703
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..703
                     /product="solute carrier organic anion transporter family
                     member 3A1 isoform X2"
                     /calculated_mol_wt=75398
     Region          39..563
                     /region_name="MFS_SLCO3_OATP3"
                     /note="Solute carrier organic anion transporter 3 family
                     of the Major Facilitator Superfamily of transporters;
                     cd17402"
                     /db_xref="CDD:340960"
     Site            order(53..54,57..58,61,93,191..192,194..196,199,219,
                     222..223,226,358,361..362,365..367,370,399,403,444..445,
                     449,453,506,509..510,513..514,517)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340960"
     CDS             1..703
                     /gene="SLCO3A1"
                     /coded_by="XM_061158630.1:66..2177"
                     /db_xref="GeneID:133067752"
ORIGIN      
        1 mqakkpggss gggrsgelqg deaqrnkkkk kkvscfsnik iflvsecalm laqgtvgayl
       61 vsvlttlerr fnlqsadvgv iassfeignl alilfvsyfg arghrprlig cggivmalga
      121 llsalpeflt hqykyeagei rwgaegrdvc aangsggdqg pdpdlicrsr tatnmmylll
      181 igaqvllgig atpvqplgvs yiddhvrrkd sslyigilft mlvfgpacgf ilgsfctkiy
      241 vdavfidtsn lditpddprw igawwggfll cgallffssv lmfgfpqslp phsdpalese
      301 qamlpereye rpkpsngvlr hplepdssas cfqqlrvipk vtkhllsnpv ftciilaacm
      361 eiavvagfaa flgkyleqqf nlttssanql lgmtaipcac lgiflggllv kklslsalga
      421 irmamlvnlv stacyvsflf lgcdtgpvag vtvpygnssm pgsaldpyss cnkncecqtd
      481 sftpvcgadg itylsacfag cnstnltgca clmtippena tvipgkcpsp gcqeafltfl
      541 cvmcvcsmig amaqtpsvii lirtvspelk syalgvlfll lrllgfippp lifgagidst
      601 clfwstfcge qgacalydnv ayrylyvsia ialksfafll ytttwqclrr nykryiknhe
      661 gglsttskes lrmkaklrtp aqpdeepraw aalmssspss prs
//
LOCUS       XP_061014614             692 aa            linear   MAM 02-DEC-2023
DEFINITION  solute carrier organic anion transporter family member 3A1 isoform
            X3 [Dama dama].
ACCESSION   XP_061014614
VERSION     XP_061014614.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158631.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..692
                     /product="solute carrier organic anion transporter family
                     member 3A1 isoform X3"
                     /calculated_mol_wt=74293
     Region          39..563
                     /region_name="MFS_SLCO3_OATP3"
                     /note="Solute carrier organic anion transporter 3 family
                     of the Major Facilitator Superfamily of transporters;
                     cd17402"
                     /db_xref="CDD:340960"
     Site            order(53..54,57..58,61,93,191..192,194..196,199,219,
                     222..223,226,358,361..362,365..367,370,399,403,444..445,
                     449,453,506,509..510,513..514,517)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340960"
     CDS             1..692
                     /gene="SLCO3A1"
                     /coded_by="XM_061158631.1:66..2144"
                     /db_xref="GeneID:133067752"
ORIGIN      
        1 mqakkpggss gggrsgelqg deaqrnkkkk kkvscfsnik iflvsecalm laqgtvgayl
       61 vsvlttlerr fnlqsadvgv iassfeignl alilfvsyfg arghrprlig cggivmalga
      121 llsalpeflt hqykyeagei rwgaegrdvc aangsggdqg pdpdlicrsr tatnmmylll
      181 igaqvllgig atpvqplgvs yiddhvrrkd sslyigilft mlvfgpacgf ilgsfctkiy
      241 vdavfidtsn lditpddprw igawwggfll cgallffssv lmfgfpqslp phsdpalese
      301 qamlpereye rpkpsngvlr hplepdssas cfqqlrvipk vtkhllsnpv ftciilaacm
      361 eiavvagfaa flgkyleqqf nlttssanql lgmtaipcac lgiflggllv kklslsalga
      421 irmamlvnlv stacyvsflf lgcdtgpvag vtvpygnssm pgsaldpyss cnkncecqtd
      481 sftpvcgadg itylsacfag cnstnltgca clmtippena tvipgkcpsp gcqeafltfl
      541 cvmcvcsmig amaqtpsvii lirtvspelk syalgvlfll lrllgfippp lifgagidst
      601 clfwstfcge qgacalydnv ayrylyvsia ialksfafll ytttwqclrr nykryiknhe
      661 gglststeyq dietektcpe sqspsedsfv rs
//
LOCUS       XP_061014615             684 aa            linear   MAM 02-DEC-2023
DEFINITION  solute carrier organic anion transporter family member 3A1 isoform
            X4 [Dama dama].
ACCESSION   XP_061014615
VERSION     XP_061014615.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158632.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..684
                     /product="solute carrier organic anion transporter family
                     member 3A1 isoform X4"
                     /calculated_mol_wt=73275
     Region          39..563
                     /region_name="MFS_SLCO3_OATP3"
                     /note="Solute carrier organic anion transporter 3 family
                     of the Major Facilitator Superfamily of transporters;
                     cd17402"
                     /db_xref="CDD:340960"
     Site            order(53..54,57..58,61,93,191..192,194..196,199,219,
                     222..223,226,358,361..362,365..367,370,399,403,444..445,
                     449,453,506,509..510,513..514,517)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340960"
     CDS             1..684
                     /gene="SLCO3A1"
                     /coded_by="XM_061158632.1:66..2120"
                     /db_xref="GeneID:133067752"
ORIGIN      
        1 mqakkpggss gggrsgelqg deaqrnkkkk kkvscfsnik iflvsecalm laqgtvgayl
       61 vsvlttlerr fnlqsadvgv iassfeignl alilfvsyfg arghrprlig cggivmalga
      121 llsalpeflt hqykyeagei rwgaegrdvc aangsggdqg pdpdlicrsr tatnmmylll
      181 igaqvllgig atpvqplgvs yiddhvrrkd sslyigilft mlvfgpacgf ilgsfctkiy
      241 vdavfidtsn lditpddprw igawwggfll cgallffssv lmfgfpqslp phsdpalese
      301 qamlpereye rpkpsngvlr hplepdssas cfqqlrvipk vtkhllsnpv ftciilaacm
      361 eiavvagfaa flgkyleqqf nlttssanql lgmtaipcac lgiflggllv kklslsalga
      421 irmamlvnlv stacyvsflf lgcdtgpvag vtvpygnssm pgsaldpyss cnkncecqtd
      481 sftpvcgadg itylsacfag cnstnltgca clmtippena tvipgkcpsp gcqeafltfl
      541 cvmcvcsmig amaqtpsvii lirtvspelk syalgvlfll lrllgfippp lifgagidst
      601 clfwstfcge qgacalydnv ayrylyvsia ialksfafll ytttwqclrr nykryiknhe
      661 gglstsvgeg rpfisrdlvt rcva
//
LOCUS       XP_061014616             683 aa            linear   MAM 02-DEC-2023
DEFINITION  synaptic vesicle glycoprotein 2B [Dama dama].
ACCESSION   XP_061014616
VERSION     XP_061014616.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158633.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..683
                     /product="synaptic vesicle glycoprotein 2B"
                     /calculated_mol_wt=77070
     Region          7..683
                     /region_name="synapt_SV2"
                     /note="synaptic vesicle protein SV2; TIGR01299"
                     /db_xref="CDD:130366"
     CDS             1..683
                     /gene="SV2B"
                     /coded_by="XM_061158633.1:466..2517"
                     /db_xref="GeneID:133067754"
ORIGIN      
        1 mddykyqdny egyaptdgyy rgnesnpded aqsdvteghd eedeiyegey qgiphpddvk
       61 akqaktapsr adglrgqadl laermedeeq lahqyetiid ecghgrfqwt lffvlglalm
      121 adgvevfvvs falpsaekdm clssskkgml glivylgmmg gafvlgglad klgrkrvlsi
      181 slainasfas lssfvqgyga flfcrlisgi giggalpivf ayfseflsre krgehlswlg
      241 ifwmtggiya samawsiiph ygwgfsmgsn yhfhswrvfv ivcalpctvs mvalkfmpes
      301 prfllemgkh deawmilkhv hdtnmrakga pekvftvsni ktpkqmdefi eiqsstgtwy
      361 qrwlvrfktt fkqvwenaly cvmgpyrmnt lilavvwftm alsyygltvw fpdmiryfqd
      421 eaykskmkvf hdehvygvti nftmenqihq hgklvndkft kmyfkhvlfe dtlfdecyfe
      481 dvtstdtyfk nctiestify ntdlyqhkfi nchfinvtfl eqkegchmdl eqdndfltyl
      541 vsflgslsvl pgniisallm drvgrlkmig gsmlisavcc fflffgnses amigwqclfc
      601 gtsiaawnal dvitvelypt nqratafgil nglckfgail gntifasfvg itkvvpilla
      661 atslvgggli alrlpetreq vlm
//
LOCUS       XP_061014617             683 aa            linear   MAM 02-DEC-2023
DEFINITION  synaptic vesicle glycoprotein 2B [Dama dama].
ACCESSION   XP_061014617
VERSION     XP_061014617.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158634.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..683
                     /product="synaptic vesicle glycoprotein 2B"
                     /calculated_mol_wt=77070
     Region          7..683
                     /region_name="synapt_SV2"
                     /note="synaptic vesicle protein SV2; TIGR01299"
                     /db_xref="CDD:130366"
     CDS             1..683
                     /gene="SV2B"
                     /coded_by="XM_061158634.1:435..2486"
                     /db_xref="GeneID:133067754"
ORIGIN      
        1 mddykyqdny egyaptdgyy rgnesnpded aqsdvteghd eedeiyegey qgiphpddvk
       61 akqaktapsr adglrgqadl laermedeeq lahqyetiid ecghgrfqwt lffvlglalm
      121 adgvevfvvs falpsaekdm clssskkgml glivylgmmg gafvlgglad klgrkrvlsi
      181 slainasfas lssfvqgyga flfcrlisgi giggalpivf ayfseflsre krgehlswlg
      241 ifwmtggiya samawsiiph ygwgfsmgsn yhfhswrvfv ivcalpctvs mvalkfmpes
      301 prfllemgkh deawmilkhv hdtnmrakga pekvftvsni ktpkqmdefi eiqsstgtwy
      361 qrwlvrfktt fkqvwenaly cvmgpyrmnt lilavvwftm alsyygltvw fpdmiryfqd
      421 eaykskmkvf hdehvygvti nftmenqihq hgklvndkft kmyfkhvlfe dtlfdecyfe
      481 dvtstdtyfk nctiestify ntdlyqhkfi nchfinvtfl eqkegchmdl eqdndfltyl
      541 vsflgslsvl pgniisallm drvgrlkmig gsmlisavcc fflffgnses amigwqclfc
      601 gtsiaawnal dvitvelypt nqratafgil nglckfgail gntifasfvg itkvvpilla
      661 atslvgggli alrlpetreq vlm
//
LOCUS       XP_061014618             683 aa            linear   MAM 02-DEC-2023
DEFINITION  synaptic vesicle glycoprotein 2B [Dama dama].
ACCESSION   XP_061014618
VERSION     XP_061014618.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158635.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..683
                     /product="synaptic vesicle glycoprotein 2B"
                     /calculated_mol_wt=77070
     Region          7..683
                     /region_name="synapt_SV2"
                     /note="synaptic vesicle protein SV2; TIGR01299"
                     /db_xref="CDD:130366"
     CDS             1..683
                     /gene="SV2B"
                     /coded_by="XM_061158635.1:387..2438"
                     /db_xref="GeneID:133067754"
ORIGIN      
        1 mddykyqdny egyaptdgyy rgnesnpded aqsdvteghd eedeiyegey qgiphpddvk
       61 akqaktapsr adglrgqadl laermedeeq lahqyetiid ecghgrfqwt lffvlglalm
      121 adgvevfvvs falpsaekdm clssskkgml glivylgmmg gafvlgglad klgrkrvlsi
      181 slainasfas lssfvqgyga flfcrlisgi giggalpivf ayfseflsre krgehlswlg
      241 ifwmtggiya samawsiiph ygwgfsmgsn yhfhswrvfv ivcalpctvs mvalkfmpes
      301 prfllemgkh deawmilkhv hdtnmrakga pekvftvsni ktpkqmdefi eiqsstgtwy
      361 qrwlvrfktt fkqvwenaly cvmgpyrmnt lilavvwftm alsyygltvw fpdmiryfqd
      421 eaykskmkvf hdehvygvti nftmenqihq hgklvndkft kmyfkhvlfe dtlfdecyfe
      481 dvtstdtyfk nctiestify ntdlyqhkfi nchfinvtfl eqkegchmdl eqdndfltyl
      541 vsflgslsvl pgniisallm drvgrlkmig gsmlisavcc fflffgnses amigwqclfc
      601 gtsiaawnal dvitvelypt nqratafgil nglckfgail gntifasfvg itkvvpilla
      661 atslvgggli alrlpetreq vlm
//
LOCUS       XP_061014619            2773 aa            linear   MAM 02-DEC-2023
DEFINITION  A-kinase anchor protein 13 isoform X1 [Dama dama].
ACCESSION   XP_061014619
VERSION     XP_061014619.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158636.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2773
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2773
                     /product="A-kinase anchor protein 13 isoform X1"
                     /calculated_mol_wt=296587
     Region          <296..917
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          854..>1258
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          1756..1812
                     /region_name="C1_AKAP13"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in A-kinase anchor protein 13 (AKAP-13) and similar
                     proteins; cd20878"
                     /db_xref="CDD:410428"
     Region          1963..2157
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous
                     (DH) domain. It appears that PH domains invariably occur
                     C-terminal to RhoGEF/DH domains; cd00160"
                     /db_xref="CDD:238091"
     Site            order(1969,1973,2080,2108..2109,2112..2113,2115..2116,
                     2119..2120,2123..2124,2127,2153,2157)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          2200..2302
                     /region_name="PH_AKAP13"
                     /note="A-kinase anchoring protein 13 Pleckstrin homology
                     (PH) domain; cd13392"
                     /db_xref="CDD:275427"
     Region          <2293..>2656
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     CDS             1..2773
                     /gene="AKAP13"
                     /coded_by="XM_061158636.1:225..8546"
                     /db_xref="GeneID:133067756"
ORIGIN      
        1 mklnpqqapl ygdcvvtvll aeedkveddv vfylvfsgst lhhctstrkv ssntletiap
       61 ghdccetvkv llcaskeglp vfvvaeedfq fiqdeaydaa qflatsagnq qalnftrfld
      121 rsgppstdvn sldekvalaf rhlklpaewn vlgtdatshd ggpretlmhf avrlgllrlt
      181 wfllqkpggr galsihnqeg atpvslaler gyhklhrllt eedagepdsw sslsyeipyg
      241 dcsvrhhrel dvymltsese phqepplpgd sctghifklm niqqqlmktn lkqmdsltps
      301 avtaqdpsgp phdqdadghf lpcvseptas lqlaspgaae scqrcrgstv gqtegscdlp
      361 gvateedtdp scrkrstgva rtggevgpap atdpgaasap dscvqslpdg rgegpeglps
      421 cgvrddettf lagatdlasp gsilqgavaq acsggklvva spagasapea agegehglmh
      481 pdaaimgnml eveesmkkrf edssistaga sdgkaadepv dgaslpdsvl aaspldankp
      541 aesilaisng kavidqtaet etsksceesa htpgaqnlql vpaaagdevs eglqpntpla
      601 svcapgspsd ltlpgphkdv tpnpkseves sgghsqnses picsaaggdk lctapecqps
      661 rgtssgvspa ehrddtapqp estttgqlgt rppptarcps gpqasstqit pdtperveas
      721 lqvsdkesqg ealkvetssa dpaevvphpq aappkaekeg asgpavtpgg tlslagspgs
      781 esvtkddals lvpsqsekgr aalqphtdgg dgpdgdarrp eeqppeggaa algpppaald
      841 pppgmgnagp gglageqerp slsaapetla vegttasall pggqaaateg gktqvvpegp
      901 ggegkartcp atgdgplcsg asrgecrppp papeapgvpe epgaaacaed ralqpgsspg
      961 tplarlhaet kpnkevapaa srptgggath slvppgagla adssqdapga epsssapapd
     1021 llaggpkapn cspassvpdv eventpslgk sagcevsgda vlddarvhgl qealgagtkd
     1081 ishnapdtls cqeenmilgl pgaspatgvt npqgstppel vappggekkl egadcgsvgp
     1141 qeaqgdskth hdplqpvgge rppemgpsge argapalpct vstkalhrpe gadsieeaas
     1201 rivdsvierv kasgalmtgg alghrspprp peagpgtept apasagetsa lqpaetppvs
     1261 sgggeasgsl eqcfagseep emilpvqgpa petempdtka edevdflsnt ressvseeaa
     1321 lgnrtstpev kqgpktqain renwctvepc pdaasllapt qrpecdsfld vglgrecask
     1381 pgvlkresgs dsdlfhspge dvdsivfskp eeeqlacdvt gsssstddta sldqhsshgs
     1441 dvslpqvssl nrsrdpqcln gfyshglgae gresesepag sgemeeeemd sitevpsscs
     1501 vlrssmrsls pfrrhswgpg knaasdaemn hrssmrvlgd vvrrppihrr smswcpsgvq
     1561 ysaalsadfn yrsfsleglt ggagignkps sslegnssnt kelrhpfsgq ergdslvsls
     1621 eedlesgqre hrmfnqqtch rskqqgfnyc tsaisspltk sfslttishs gldssrpfhs
     1681 tssnltgsit eenfnflpqs pkkdfeiksg tkvsrtfsyi knkmssskks kekekekdki
     1741 kekekdskek ekdkktvngh afssisvvgp fgchqcmksf tskdaytcan cgafvhkgcr
     1801 eslsscakvk mkqpkgnlqa hdtsslptvi mrskssqpke rprsavllad ettaapvfan
     1861 rrsqqstmls ksvsiqniag vgndenisnt wkflshstds lnkiskvnes tesltdegvg
     1921 tdmnegqlmg dfeteskqle aeswsqivds kflkqhkkdv vkrqeviyel mqtefhhlrt
     1981 lkimsdvysr gmmadllfeq qmveklfpcl delisihsqf fqrilerkkd slvdkseknf
     2041 lirrigdvlv hqfsgenaer lkktygkfcg qhnqsvnyfk dlhtkdkrfq afvkkkmsss
     2101 vvrrlgipec illvtqritk ypvlfqrilq ctkdneaeqq dltqslglvk evisavdskv
     2161 asyekkvrln eiytktdsks imrmksgqmf akedlrrkkl vrdgsvflks atgrlkevqa
     2221 vlltdilvfl qekdqkyvfa sldqkstvis lkklivreva heekglflis mgmkdpemve
     2281 vhasskeern swiqiiqdti ntlnrdedeg ipseneeekk mldtkarelk eqlqqkdqqi
     2341 lllleekevi frdmtecstp lpedcspths crtlfrsste ealkggplmk saineveilq
     2401 glvsgslrgs lgqvvsspse qegvvgpvsl prraetfggf dshqmnaskg gekeegddgq
     2461 dlrrtesdsg lkkggnanlv fmlkrnseqv iqsvvhlhel lstlqgvvlq qdsyiedqkl
     2521 llseraltrt asrpsslieq ekqrslerqr qdlanlqrqq aqhqeerrrr erewearera
     2581 laerearlaq redelrrgrq dlererdell qrkgayqgdl erlraaqrll ereqeqlrrd
     2641 serlsqvsyq ntkllripsf spnpeetpsp papsiaksgs ldselsvspk rnsmsrthke
     2701 kgpfhmlgsa sqtnrapeaq sqtpvststs trlfglakpk ekkekkkkgk gsrsqpgdgp
     2761 asevpaegee ifc
//
LOCUS       XP_061014620            2773 aa            linear   MAM 02-DEC-2023
DEFINITION  A-kinase anchor protein 13 isoform X1 [Dama dama].
ACCESSION   XP_061014620
VERSION     XP_061014620.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158637.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2773
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2773
                     /product="A-kinase anchor protein 13 isoform X1"
                     /calculated_mol_wt=296587
     Region          <296..917
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          854..>1258
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          1756..1812
                     /region_name="C1_AKAP13"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in A-kinase anchor protein 13 (AKAP-13) and similar
                     proteins; cd20878"
                     /db_xref="CDD:410428"
     Region          1963..2157
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous
                     (DH) domain. It appears that PH domains invariably occur
                     C-terminal to RhoGEF/DH domains; cd00160"
                     /db_xref="CDD:238091"
     Site            order(1969,1973,2080,2108..2109,2112..2113,2115..2116,
                     2119..2120,2123..2124,2127,2153,2157)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          2200..2302
                     /region_name="PH_AKAP13"
                     /note="A-kinase anchoring protein 13 Pleckstrin homology
                     (PH) domain; cd13392"
                     /db_xref="CDD:275427"
     Region          <2293..>2656
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     CDS             1..2773
                     /gene="AKAP13"
                     /coded_by="XM_061158637.1:35..8356"
                     /db_xref="GeneID:133067756"
ORIGIN      
        1 mklnpqqapl ygdcvvtvll aeedkveddv vfylvfsgst lhhctstrkv ssntletiap
       61 ghdccetvkv llcaskeglp vfvvaeedfq fiqdeaydaa qflatsagnq qalnftrfld
      121 rsgppstdvn sldekvalaf rhlklpaewn vlgtdatshd ggpretlmhf avrlgllrlt
      181 wfllqkpggr galsihnqeg atpvslaler gyhklhrllt eedagepdsw sslsyeipyg
      241 dcsvrhhrel dvymltsese phqepplpgd sctghifklm niqqqlmktn lkqmdsltps
      301 avtaqdpsgp phdqdadghf lpcvseptas lqlaspgaae scqrcrgstv gqtegscdlp
      361 gvateedtdp scrkrstgva rtggevgpap atdpgaasap dscvqslpdg rgegpeglps
      421 cgvrddettf lagatdlasp gsilqgavaq acsggklvva spagasapea agegehglmh
      481 pdaaimgnml eveesmkkrf edssistaga sdgkaadepv dgaslpdsvl aaspldankp
      541 aesilaisng kavidqtaet etsksceesa htpgaqnlql vpaaagdevs eglqpntpla
      601 svcapgspsd ltlpgphkdv tpnpkseves sgghsqnses picsaaggdk lctapecqps
      661 rgtssgvspa ehrddtapqp estttgqlgt rppptarcps gpqasstqit pdtperveas
      721 lqvsdkesqg ealkvetssa dpaevvphpq aappkaekeg asgpavtpgg tlslagspgs
      781 esvtkddals lvpsqsekgr aalqphtdgg dgpdgdarrp eeqppeggaa algpppaald
      841 pppgmgnagp gglageqerp slsaapetla vegttasall pggqaaateg gktqvvpegp
      901 ggegkartcp atgdgplcsg asrgecrppp papeapgvpe epgaaacaed ralqpgsspg
      961 tplarlhaet kpnkevapaa srptgggath slvppgagla adssqdapga epsssapapd
     1021 llaggpkapn cspassvpdv eventpslgk sagcevsgda vlddarvhgl qealgagtkd
     1081 ishnapdtls cqeenmilgl pgaspatgvt npqgstppel vappggekkl egadcgsvgp
     1141 qeaqgdskth hdplqpvgge rppemgpsge argapalpct vstkalhrpe gadsieeaas
     1201 rivdsvierv kasgalmtgg alghrspprp peagpgtept apasagetsa lqpaetppvs
     1261 sgggeasgsl eqcfagseep emilpvqgpa petempdtka edevdflsnt ressvseeaa
     1321 lgnrtstpev kqgpktqain renwctvepc pdaasllapt qrpecdsfld vglgrecask
     1381 pgvlkresgs dsdlfhspge dvdsivfskp eeeqlacdvt gsssstddta sldqhsshgs
     1441 dvslpqvssl nrsrdpqcln gfyshglgae gresesepag sgemeeeemd sitevpsscs
     1501 vlrssmrsls pfrrhswgpg knaasdaemn hrssmrvlgd vvrrppihrr smswcpsgvq
     1561 ysaalsadfn yrsfsleglt ggagignkps sslegnssnt kelrhpfsgq ergdslvsls
     1621 eedlesgqre hrmfnqqtch rskqqgfnyc tsaisspltk sfslttishs gldssrpfhs
     1681 tssnltgsit eenfnflpqs pkkdfeiksg tkvsrtfsyi knkmssskks kekekekdki
     1741 kekekdskek ekdkktvngh afssisvvgp fgchqcmksf tskdaytcan cgafvhkgcr
     1801 eslsscakvk mkqpkgnlqa hdtsslptvi mrskssqpke rprsavllad ettaapvfan
     1861 rrsqqstmls ksvsiqniag vgndenisnt wkflshstds lnkiskvnes tesltdegvg
     1921 tdmnegqlmg dfeteskqle aeswsqivds kflkqhkkdv vkrqeviyel mqtefhhlrt
     1981 lkimsdvysr gmmadllfeq qmveklfpcl delisihsqf fqrilerkkd slvdkseknf
     2041 lirrigdvlv hqfsgenaer lkktygkfcg qhnqsvnyfk dlhtkdkrfq afvkkkmsss
     2101 vvrrlgipec illvtqritk ypvlfqrilq ctkdneaeqq dltqslglvk evisavdskv
     2161 asyekkvrln eiytktdsks imrmksgqmf akedlrrkkl vrdgsvflks atgrlkevqa
     2221 vlltdilvfl qekdqkyvfa sldqkstvis lkklivreva heekglflis mgmkdpemve
     2281 vhasskeern swiqiiqdti ntlnrdedeg ipseneeekk mldtkarelk eqlqqkdqqi
     2341 lllleekevi frdmtecstp lpedcspths crtlfrsste ealkggplmk saineveilq
     2401 glvsgslrgs lgqvvsspse qegvvgpvsl prraetfggf dshqmnaskg gekeegddgq
     2461 dlrrtesdsg lkkggnanlv fmlkrnseqv iqsvvhlhel lstlqgvvlq qdsyiedqkl
     2521 llseraltrt asrpsslieq ekqrslerqr qdlanlqrqq aqhqeerrrr erewearera
     2581 laerearlaq redelrrgrq dlererdell qrkgayqgdl erlraaqrll ereqeqlrrd
     2641 serlsqvsyq ntkllripsf spnpeetpsp papsiaksgs ldselsvspk rnsmsrthke
     2701 kgpfhmlgsa sqtnrapeaq sqtpvststs trlfglakpk ekkekkkkgk gsrsqpgdgp
     2761 asevpaegee ifc
//
LOCUS       XP_061014621            2773 aa            linear   MAM 02-DEC-2023
DEFINITION  A-kinase anchor protein 13 isoform X1 [Dama dama].
ACCESSION   XP_061014621
VERSION     XP_061014621.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158638.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2773
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2773
                     /product="A-kinase anchor protein 13 isoform X1"
                     /calculated_mol_wt=296587
     Region          <296..917
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          854..>1258
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          1756..1812
                     /region_name="C1_AKAP13"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in A-kinase anchor protein 13 (AKAP-13) and similar
                     proteins; cd20878"
                     /db_xref="CDD:410428"
     Region          1963..2157
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous
                     (DH) domain. It appears that PH domains invariably occur
                     C-terminal to RhoGEF/DH domains; cd00160"
                     /db_xref="CDD:238091"
     Site            order(1969,1973,2080,2108..2109,2112..2113,2115..2116,
                     2119..2120,2123..2124,2127,2153,2157)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          2200..2302
                     /region_name="PH_AKAP13"
                     /note="A-kinase anchoring protein 13 Pleckstrin homology
                     (PH) domain; cd13392"
                     /db_xref="CDD:275427"
     Region          <2293..>2656
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     CDS             1..2773
                     /gene="AKAP13"
                     /coded_by="XM_061158638.1:23..8344"
                     /db_xref="GeneID:133067756"
ORIGIN      
        1 mklnpqqapl ygdcvvtvll aeedkveddv vfylvfsgst lhhctstrkv ssntletiap
       61 ghdccetvkv llcaskeglp vfvvaeedfq fiqdeaydaa qflatsagnq qalnftrfld
      121 rsgppstdvn sldekvalaf rhlklpaewn vlgtdatshd ggpretlmhf avrlgllrlt
      181 wfllqkpggr galsihnqeg atpvslaler gyhklhrllt eedagepdsw sslsyeipyg
      241 dcsvrhhrel dvymltsese phqepplpgd sctghifklm niqqqlmktn lkqmdsltps
      301 avtaqdpsgp phdqdadghf lpcvseptas lqlaspgaae scqrcrgstv gqtegscdlp
      361 gvateedtdp scrkrstgva rtggevgpap atdpgaasap dscvqslpdg rgegpeglps
      421 cgvrddettf lagatdlasp gsilqgavaq acsggklvva spagasapea agegehglmh
      481 pdaaimgnml eveesmkkrf edssistaga sdgkaadepv dgaslpdsvl aaspldankp
      541 aesilaisng kavidqtaet etsksceesa htpgaqnlql vpaaagdevs eglqpntpla
      601 svcapgspsd ltlpgphkdv tpnpkseves sgghsqnses picsaaggdk lctapecqps
      661 rgtssgvspa ehrddtapqp estttgqlgt rppptarcps gpqasstqit pdtperveas
      721 lqvsdkesqg ealkvetssa dpaevvphpq aappkaekeg asgpavtpgg tlslagspgs
      781 esvtkddals lvpsqsekgr aalqphtdgg dgpdgdarrp eeqppeggaa algpppaald
      841 pppgmgnagp gglageqerp slsaapetla vegttasall pggqaaateg gktqvvpegp
      901 ggegkartcp atgdgplcsg asrgecrppp papeapgvpe epgaaacaed ralqpgsspg
      961 tplarlhaet kpnkevapaa srptgggath slvppgagla adssqdapga epsssapapd
     1021 llaggpkapn cspassvpdv eventpslgk sagcevsgda vlddarvhgl qealgagtkd
     1081 ishnapdtls cqeenmilgl pgaspatgvt npqgstppel vappggekkl egadcgsvgp
     1141 qeaqgdskth hdplqpvgge rppemgpsge argapalpct vstkalhrpe gadsieeaas
     1201 rivdsvierv kasgalmtgg alghrspprp peagpgtept apasagetsa lqpaetppvs
     1261 sgggeasgsl eqcfagseep emilpvqgpa petempdtka edevdflsnt ressvseeaa
     1321 lgnrtstpev kqgpktqain renwctvepc pdaasllapt qrpecdsfld vglgrecask
     1381 pgvlkresgs dsdlfhspge dvdsivfskp eeeqlacdvt gsssstddta sldqhsshgs
     1441 dvslpqvssl nrsrdpqcln gfyshglgae gresesepag sgemeeeemd sitevpsscs
     1501 vlrssmrsls pfrrhswgpg knaasdaemn hrssmrvlgd vvrrppihrr smswcpsgvq
     1561 ysaalsadfn yrsfsleglt ggagignkps sslegnssnt kelrhpfsgq ergdslvsls
     1621 eedlesgqre hrmfnqqtch rskqqgfnyc tsaisspltk sfslttishs gldssrpfhs
     1681 tssnltgsit eenfnflpqs pkkdfeiksg tkvsrtfsyi knkmssskks kekekekdki
     1741 kekekdskek ekdkktvngh afssisvvgp fgchqcmksf tskdaytcan cgafvhkgcr
     1801 eslsscakvk mkqpkgnlqa hdtsslptvi mrskssqpke rprsavllad ettaapvfan
     1861 rrsqqstmls ksvsiqniag vgndenisnt wkflshstds lnkiskvnes tesltdegvg
     1921 tdmnegqlmg dfeteskqle aeswsqivds kflkqhkkdv vkrqeviyel mqtefhhlrt
     1981 lkimsdvysr gmmadllfeq qmveklfpcl delisihsqf fqrilerkkd slvdkseknf
     2041 lirrigdvlv hqfsgenaer lkktygkfcg qhnqsvnyfk dlhtkdkrfq afvkkkmsss
     2101 vvrrlgipec illvtqritk ypvlfqrilq ctkdneaeqq dltqslglvk evisavdskv
     2161 asyekkvrln eiytktdsks imrmksgqmf akedlrrkkl vrdgsvflks atgrlkevqa
     2221 vlltdilvfl qekdqkyvfa sldqkstvis lkklivreva heekglflis mgmkdpemve
     2281 vhasskeern swiqiiqdti ntlnrdedeg ipseneeekk mldtkarelk eqlqqkdqqi
     2341 lllleekevi frdmtecstp lpedcspths crtlfrsste ealkggplmk saineveilq
     2401 glvsgslrgs lgqvvsspse qegvvgpvsl prraetfggf dshqmnaskg gekeegddgq
     2461 dlrrtesdsg lkkggnanlv fmlkrnseqv iqsvvhlhel lstlqgvvlq qdsyiedqkl
     2521 llseraltrt asrpsslieq ekqrslerqr qdlanlqrqq aqhqeerrrr erewearera
     2581 laerearlaq redelrrgrq dlererdell qrkgayqgdl erlraaqrll ereqeqlrrd
     2641 serlsqvsyq ntkllripsf spnpeetpsp papsiaksgs ldselsvspk rnsmsrthke
     2701 kgpfhmlgsa sqtnrapeaq sqtpvststs trlfglakpk ekkekkkkgk gsrsqpgdgp
     2761 asevpaegee ifc
//
LOCUS       XP_061014622            2772 aa            linear   MAM 02-DEC-2023
DEFINITION  A-kinase anchor protein 13 isoform X2 [Dama dama].
ACCESSION   XP_061014622
VERSION     XP_061014622.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158639.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2772
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2772
                     /product="A-kinase anchor protein 13 isoform X2"
                     /calculated_mol_wt=296530
     Region          <296..917
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          854..>1258
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          1756..1812
                     /region_name="C1_AKAP13"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in A-kinase anchor protein 13 (AKAP-13) and similar
                     proteins; cd20878"
                     /db_xref="CDD:410428"
     Region          1962..2156
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous
                     (DH) domain. It appears that PH domains invariably occur
                     C-terminal to RhoGEF/DH domains; cd00160"
                     /db_xref="CDD:238091"
     Site            order(1968,1972,2079,2107..2108,2111..2112,2114..2115,
                     2118..2119,2122..2123,2126,2152,2156)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          2199..2301
                     /region_name="PH_AKAP13"
                     /note="A-kinase anchoring protein 13 Pleckstrin homology
                     (PH) domain; cd13392"
                     /db_xref="CDD:275427"
     Region          <2292..>2655
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     CDS             1..2772
                     /gene="AKAP13"
                     /coded_by="XM_061158639.1:225..8543"
                     /db_xref="GeneID:133067756"
ORIGIN      
        1 mklnpqqapl ygdcvvtvll aeedkveddv vfylvfsgst lhhctstrkv ssntletiap
       61 ghdccetvkv llcaskeglp vfvvaeedfq fiqdeaydaa qflatsagnq qalnftrfld
      121 rsgppstdvn sldekvalaf rhlklpaewn vlgtdatshd ggpretlmhf avrlgllrlt
      181 wfllqkpggr galsihnqeg atpvslaler gyhklhrllt eedagepdsw sslsyeipyg
      241 dcsvrhhrel dvymltsese phqepplpgd sctghifklm niqqqlmktn lkqmdsltps
      301 avtaqdpsgp phdqdadghf lpcvseptas lqlaspgaae scqrcrgstv gqtegscdlp
      361 gvateedtdp scrkrstgva rtggevgpap atdpgaasap dscvqslpdg rgegpeglps
      421 cgvrddettf lagatdlasp gsilqgavaq acsggklvva spagasapea agegehglmh
      481 pdaaimgnml eveesmkkrf edssistaga sdgkaadepv dgaslpdsvl aaspldankp
      541 aesilaisng kavidqtaet etsksceesa htpgaqnlql vpaaagdevs eglqpntpla
      601 svcapgspsd ltlpgphkdv tpnpkseves sgghsqnses picsaaggdk lctapecqps
      661 rgtssgvspa ehrddtapqp estttgqlgt rppptarcps gpqasstqit pdtperveas
      721 lqvsdkesqg ealkvetssa dpaevvphpq aappkaekeg asgpavtpgg tlslagspgs
      781 esvtkddals lvpsqsekgr aalqphtdgg dgpdgdarrp eeqppeggaa algpppaald
      841 pppgmgnagp gglageqerp slsaapetla vegttasall pggqaaateg gktqvvpegp
      901 ggegkartcp atgdgplcsg asrgecrppp papeapgvpe epgaaacaed ralqpgsspg
      961 tplarlhaet kpnkevapaa srptgggath slvppgagla adssqdapga epsssapapd
     1021 llaggpkapn cspassvpdv eventpslgk sagcevsgda vlddarvhgl qealgagtkd
     1081 ishnapdtls cqeenmilgl pgaspatgvt npqgstppel vappggekkl egadcgsvgp
     1141 qeaqgdskth hdplqpvgge rppemgpsge argapalpct vstkalhrpe gadsieeaas
     1201 rivdsvierv kasgalmtgg alghrspprp peagpgtept apasagetsa lqpaetppvs
     1261 sgggeasgsl eqcfagseep emilpvqgpa petempdtka edevdflsnt ressvseeaa
     1321 lgnrtstpev kqgpktqain renwctvepc pdaasllapt qrpecdsfld vglgrecask
     1381 pgvlkresgs dsdlfhspge dvdsivfskp eeeqlacdvt gsssstddta sldqhsshgs
     1441 dvslpqvssl nrsrdpqcln gfyshglgae gresesepag sgemeeeemd sitevpsscs
     1501 vlrssmrsls pfrrhswgpg knaasdaemn hrssmrvlgd vvrrppihrr smswcpsgvq
     1561 ysaalsadfn yrsfsleglt ggagignkps sslegnssnt kelrhpfsgq ergdslvsls
     1621 eedlesgqre hrmfnqqtch rskqqgfnyc tsaisspltk sfslttishs gldssrpfhs
     1681 tssnltgsit eenfnflpqs pkkdfeiksg tkvsrtfsyi knkmssskks kekekekdki
     1741 kekekdskek ekdkktvngh afssisvvgp fgchqcmksf tskdaytcan cgafvhkgcr
     1801 eslsscakvk mkqpkgnlqa hdtsslptvi mrskssqpke rprsavllad ettaapvfan
     1861 rrsqqstmls ksvsiqniag vgndenisnt wkflshstds lnkiskvnes tesltdevgt
     1921 dmnegqlmgd feteskqlea eswsqivdsk flkqhkkdvv krqeviyelm qtefhhlrtl
     1981 kimsdvysrg mmadllfeqq mveklfpcld elisihsqff qrilerkkds lvdkseknfl
     2041 irrigdvlvh qfsgenaerl kktygkfcgq hnqsvnyfkd lhtkdkrfqa fvkkkmsssv
     2101 vrrlgipeci llvtqritky pvlfqrilqc tkdneaeqqd ltqslglvke visavdskva
     2161 syekkvrlne iytktdsksi mrmksgqmfa kedlrrkklv rdgsvflksa tgrlkevqav
     2221 lltdilvflq ekdqkyvfas ldqkstvisl kklivrevah eekglflism gmkdpemvev
     2281 hasskeerns wiqiiqdtin tlnrdedegi pseneeekkm ldtkarelke qlqqkdqqil
     2341 llleekevif rdmtecstpl pedcspthsc rtlfrsstee alkggplmks aineveilqg
     2401 lvsgslrgsl gqvvsspseq egvvgpvslp rraetfggfd shqmnaskgg ekeegddgqd
     2461 lrrtesdsgl kkggnanlvf mlkrnseqvi qsvvhlhell stlqgvvlqq dsyiedqkll
     2521 lseraltrta srpsslieqe kqrslerqrq dlanlqrqqa qhqeerrrre reweareral
     2581 aerearlaqr edelrrgrqd lererdellq rkgayqgdle rlraaqrlle reqeqlrrds
     2641 erlsqvsyqn tkllripsfs pnpeetpspp apsiaksgsl dselsvspkr nsmsrthkek
     2701 gpfhmlgsas qtnrapeaqs qtpvststst rlfglakpke kkekkkkgkg srsqpgdgpa
     2761 sevpaegeei fc
//
LOCUS       XP_061014623            2771 aa            linear   MAM 02-DEC-2023
DEFINITION  A-kinase anchor protein 13 isoform X3 [Dama dama].
ACCESSION   XP_061014623
VERSION     XP_061014623.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158640.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2771
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2771
                     /product="A-kinase anchor protein 13 isoform X3"
                     /calculated_mol_wt=296431
     Region          <296..917
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          854..>1258
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          1756..1812
                     /region_name="C1_AKAP13"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in A-kinase anchor protein 13 (AKAP-13) and similar
                     proteins; cd20878"
                     /db_xref="CDD:410428"
     Region          1961..2155
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous
                     (DH) domain. It appears that PH domains invariably occur
                     C-terminal to RhoGEF/DH domains; cd00160"
                     /db_xref="CDD:238091"
     Site            order(1967,1971,2078,2106..2107,2110..2111,2113..2114,
                     2117..2118,2121..2122,2125,2151,2155)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          2198..2300
                     /region_name="PH_AKAP13"
                     /note="A-kinase anchoring protein 13 Pleckstrin homology
                     (PH) domain; cd13392"
                     /db_xref="CDD:275427"
     Region          <2291..>2654
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     CDS             1..2771
                     /gene="AKAP13"
                     /coded_by="XM_061158640.1:225..8540"
                     /db_xref="GeneID:133067756"
ORIGIN      
        1 mklnpqqapl ygdcvvtvll aeedkveddv vfylvfsgst lhhctstrkv ssntletiap
       61 ghdccetvkv llcaskeglp vfvvaeedfq fiqdeaydaa qflatsagnq qalnftrfld
      121 rsgppstdvn sldekvalaf rhlklpaewn vlgtdatshd ggpretlmhf avrlgllrlt
      181 wfllqkpggr galsihnqeg atpvslaler gyhklhrllt eedagepdsw sslsyeipyg
      241 dcsvrhhrel dvymltsese phqepplpgd sctghifklm niqqqlmktn lkqmdsltps
      301 avtaqdpsgp phdqdadghf lpcvseptas lqlaspgaae scqrcrgstv gqtegscdlp
      361 gvateedtdp scrkrstgva rtggevgpap atdpgaasap dscvqslpdg rgegpeglps
      421 cgvrddettf lagatdlasp gsilqgavaq acsggklvva spagasapea agegehglmh
      481 pdaaimgnml eveesmkkrf edssistaga sdgkaadepv dgaslpdsvl aaspldankp
      541 aesilaisng kavidqtaet etsksceesa htpgaqnlql vpaaagdevs eglqpntpla
      601 svcapgspsd ltlpgphkdv tpnpkseves sgghsqnses picsaaggdk lctapecqps
      661 rgtssgvspa ehrddtapqp estttgqlgt rppptarcps gpqasstqit pdtperveas
      721 lqvsdkesqg ealkvetssa dpaevvphpq aappkaekeg asgpavtpgg tlslagspgs
      781 esvtkddals lvpsqsekgr aalqphtdgg dgpdgdarrp eeqppeggaa algpppaald
      841 pppgmgnagp gglageqerp slsaapetla vegttasall pggqaaateg gktqvvpegp
      901 ggegkartcp atgdgplcsg asrgecrppp papeapgvpe epgaaacaed ralqpgsspg
      961 tplarlhaet kpnkevapaa srptgggath slvppgagla adssqdapga epsssapapd
     1021 llaggpkapn cspassvpdv eventpslgk sagcevsgda vlddarvhgl qealgagtkd
     1081 ishnapdtls cqeenmilgl pgaspatgvt npqgstppel vappggekkl egadcgsvgp
     1141 qeaqgdskth hdplqpvgge rppemgpsge argapalpct vstkalhrpe gadsieeaas
     1201 rivdsvierv kasgalmtgg alghrspprp peagpgtept apasagetsa lqpaetppvs
     1261 sgggeasgsl eqcfagseep emilpvqgpa petempdtka edevdflsnt ressvseeaa
     1321 lgnrtstpev kqgpktqain renwctvepc pdaasllapt qrpecdsfld vglgrecask
     1381 pgvlkresgs dsdlfhspge dvdsivfskp eeeqlacdvt gsssstddta sldqhsshgs
     1441 dvslpqvssl nrsrdpqcln gfyshglgae gresesepag sgemeeeemd sitevpsscs
     1501 vlrssmrsls pfrrhswgpg knaasdaemn hrssmrvlgd vvrrppihrr smswcpsgvq
     1561 ysaalsadfn yrsfsleglt ggagignkps sslegnssnt kelrhpfsgq ergdslvsls
     1621 eedlesgqre hrmfnqqtch rskqqgfnyc tsaisspltk sfslttishs gldssrpfhs
     1681 tssnltgsit eenfnflpqs pkkdfeiksg tkvsrtfsyi knkmssskks kekekekdki
     1741 kekekdskek ekdkktvngh afssisvvgp fgchqcmksf tskdaytcan cgafvhkgcr
     1801 eslsscakvk mkqpkgnlqa hdtsslptvi mrskssqpke rprsavllad ettaapvfan
     1861 rrsqqstmls ksvsiqniag vgndenisnt wkflshstds lnkiskvnes tesltdegtd
     1921 mnegqlmgdf eteskqleae swsqivdskf lkqhkkdvvk rqeviyelmq tefhhlrtlk
     1981 imsdvysrgm madllfeqqm veklfpclde lisihsqffq rilerkkdsl vdkseknfli
     2041 rrigdvlvhq fsgenaerlk ktygkfcgqh nqsvnyfkdl htkdkrfqaf vkkkmsssvv
     2101 rrlgipecil lvtqritkyp vlfqrilqct kdneaeqqdl tqslglvkev isavdskvas
     2161 yekkvrlnei ytktdsksim rmksgqmfak edlrrkklvr dgsvflksat grlkevqavl
     2221 ltdilvflqe kdqkyvfasl dqkstvislk klivrevahe ekglflismg mkdpemvevh
     2281 asskeernsw iqiiqdtint lnrdedegip seneeekkml dtkarelkeq lqqkdqqill
     2341 lleekevifr dmtecstplp edcspthscr tlfrssteea lkggplmksa ineveilqgl
     2401 vsgslrgslg qvvsspseqe gvvgpvslpr raetfggfds hqmnaskgge keegddgqdl
     2461 rrtesdsglk kggnanlvfm lkrnseqviq svvhlhells tlqgvvlqqd syiedqklll
     2521 seraltrtas rpsslieqek qrslerqrqd lanlqrqqaq hqeerrrrer ewearerala
     2581 erearlaqre delrrgrqdl ererdellqr kgayqgdler lraaqrller eqeqlrrdse
     2641 rlsqvsyqnt kllripsfsp npeetpsppa psiaksgsld selsvspkrn smsrthkekg
     2701 pfhmlgsasq tnrapeaqsq tpvstststr lfglakpkek kekkkkgkgs rsqpgdgpas
     2761 evpaegeeif c
//
LOCUS       XP_061014624            2751 aa            linear   MAM 02-DEC-2023
DEFINITION  A-kinase anchor protein 13 isoform X4 [Dama dama].
ACCESSION   XP_061014624
VERSION     XP_061014624.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158641.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2751
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2751
                     /product="A-kinase anchor protein 13 isoform X4"
                     /calculated_mol_wt=294165
     Region          <296..917
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          854..>1258
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          1734..1790
                     /region_name="C1_AKAP13"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in A-kinase anchor protein 13 (AKAP-13) and similar
                     proteins; cd20878"
                     /db_xref="CDD:410428"
     Region          1941..2135
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous
                     (DH) domain. It appears that PH domains invariably occur
                     C-terminal to RhoGEF/DH domains; cd00160"
                     /db_xref="CDD:238091"
     Site            order(1947,1951,2058,2086..2087,2090..2091,2093..2094,
                     2097..2098,2101..2102,2105,2131,2135)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          2178..2280
                     /region_name="PH_AKAP13"
                     /note="A-kinase anchoring protein 13 Pleckstrin homology
                     (PH) domain; cd13392"
                     /db_xref="CDD:275427"
     Region          <2271..>2634
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     CDS             1..2751
                     /gene="AKAP13"
                     /coded_by="XM_061158641.1:225..8480"
                     /db_xref="GeneID:133067756"
ORIGIN      
        1 mklnpqqapl ygdcvvtvll aeedkveddv vfylvfsgst lhhctstrkv ssntletiap
       61 ghdccetvkv llcaskeglp vfvvaeedfq fiqdeaydaa qflatsagnq qalnftrfld
      121 rsgppstdvn sldekvalaf rhlklpaewn vlgtdatshd ggpretlmhf avrlgllrlt
      181 wfllqkpggr galsihnqeg atpvslaler gyhklhrllt eedagepdsw sslsyeipyg
      241 dcsvrhhrel dvymltsese phqepplpgd sctghifklm niqqqlmktn lkqmdsltps
      301 avtaqdpsgp phdqdadghf lpcvseptas lqlaspgaae scqrcrgstv gqtegscdlp
      361 gvateedtdp scrkrstgva rtggevgpap atdpgaasap dscvqslpdg rgegpeglps
      421 cgvrddettf lagatdlasp gsilqgavaq acsggklvva spagasapea agegehglmh
      481 pdaaimgnml eveesmkkrf edssistaga sdgkaadepv dgaslpdsvl aaspldankp
      541 aesilaisng kavidqtaet etsksceesa htpgaqnlql vpaaagdevs eglqpntpla
      601 svcapgspsd ltlpgphkdv tpnpkseves sgghsqnses picsaaggdk lctapecqps
      661 rgtssgvspa ehrddtapqp estttgqlgt rppptarcps gpqasstqit pdtperveas
      721 lqvsdkesqg ealkvetssa dpaevvphpq aappkaekeg asgpavtpgg tlslagspgs
      781 esvtkddals lvpsqsekgr aalqphtdgg dgpdgdarrp eeqppeggaa algpppaald
      841 pppgmgnagp gglageqerp slsaapetla vegttasall pggqaaateg gktqvvpegp
      901 ggegkartcp atgdgplcsg asrgecrppp papeapgvpe epgaaacaed ralqpgsspg
      961 tplarlhaet kpnkevapaa srptgggath slvppgagla adssqdapga epsssapapd
     1021 llaggpkapn cspassvpdv eventpslgk sagcevsgda vlddarvhgl qealgagtkd
     1081 ishnapdtls cqeenmilgl pgaspatgvt npqgstppel vappggekkl egadcgsvgp
     1141 qeaqgdskth hdplqpvgge rppemgpsge argapalpct vstkalhrpe gadsieeaas
     1201 rivdsvierv kasgalmtgg alghrspprp peagpgtept apasagetsa lqpaetppvs
     1261 sgggeasgsl eqcfagseep emilpvqgpa petempdtka edevdflsnt ressvseeaa
     1321 lgnrtstpev kqgpktqain renwctvepc pdaasllapt qrpecdsfld vglgrecask
     1381 pgvlkresgs dsdlfhspge dvdsivfskp eeeqlacdvt gsssstddta sldqhsshgs
     1441 dvslpqvssl nrsrdpqcln gfyshglgae gresesepag sgemeeeemd sitevpsscs
     1501 vlrssmrsls pfrrhswgpg knaasdaemn hrssmrvlgd vvrrppihrr sfslegltgg
     1561 agignkpsss legnssntke lrhpfsgqer gdslvslsee dlesgqrehr mfnqqtchrs
     1621 kqqgfnycts aisspltksf slttishsgl dssrpfhsts snltgsitee nfnflpqspk
     1681 kdfeiksgtk vsrtfsyikn kmssskkske kekekdkike kekdskekek dkktvnghaf
     1741 ssisvvgpfg chqcmksfts kdaytcancg afvhkgcres lsscakvkmk qpkgnlqahd
     1801 tsslptvimr skssqpkerp rsavlladet taapvfanrr sqqstmlsks vsiqniagvg
     1861 ndenisntwk flshstdsln kiskvneste sltdegvgtd mnegqlmgdf eteskqleae
     1921 swsqivdskf lkqhkkdvvk rqeviyelmq tefhhlrtlk imsdvysrgm madllfeqqm
     1981 veklfpclde lisihsqffq rilerkkdsl vdkseknfli rrigdvlvhq fsgenaerlk
     2041 ktygkfcgqh nqsvnyfkdl htkdkrfqaf vkkkmsssvv rrlgipecil lvtqritkyp
     2101 vlfqrilqct kdneaeqqdl tqslglvkev isavdskvas yekkvrlnei ytktdsksim
     2161 rmksgqmfak edlrrkklvr dgsvflksat grlkevqavl ltdilvflqe kdqkyvfasl
     2221 dqkstvislk klivrevahe ekglflismg mkdpemvevh asskeernsw iqiiqdtint
     2281 lnrdedegip seneeekkml dtkarelkeq lqqkdqqill lleekevifr dmtecstplp
     2341 edcspthscr tlfrssteea lkggplmksa ineveilqgl vsgslrgslg qvvsspseqe
     2401 gvvgpvslpr raetfggfds hqmnaskgge keegddgqdl rrtesdsglk kggnanlvfm
     2461 lkrnseqviq svvhlhells tlqgvvlqqd syiedqklll seraltrtas rpsslieqek
     2521 qrslerqrqd lanlqrqqaq hqeerrrrer ewearerala erearlaqre delrrgrqdl
     2581 ererdellqr kgayqgdler lraaqrller eqeqlrrdse rlsqvsyqnt kllripsfsp
     2641 npeetpsppa psiaksgsld selsvspkrn smsrthkekg pfhmlgsasq tnrapeaqsq
     2701 tpvstststr lfglakpkek kekkkkgkgs rsqpgdgpas evpaegeeif c
//
LOCUS       XP_061014625            2733 aa            linear   MAM 02-DEC-2023
DEFINITION  A-kinase anchor protein 13 isoform X5 [Dama dama].
ACCESSION   XP_061014625
VERSION     XP_061014625.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158642.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2733
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2733
                     /product="A-kinase anchor protein 13 isoform X5"
                     /calculated_mol_wt=292051
     Region          <296..917
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          854..>1258
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          1716..1772
                     /region_name="C1_AKAP13"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in A-kinase anchor protein 13 (AKAP-13) and similar
                     proteins; cd20878"
                     /db_xref="CDD:410428"
     Region          1923..2117
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous
                     (DH) domain. It appears that PH domains invariably occur
                     C-terminal to RhoGEF/DH domains; cd00160"
                     /db_xref="CDD:238091"
     Site            order(1929,1933,2040,2068..2069,2072..2073,2075..2076,
                     2079..2080,2083..2084,2087,2113,2117)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          2160..2262
                     /region_name="PH_AKAP13"
                     /note="A-kinase anchoring protein 13 Pleckstrin homology
                     (PH) domain; cd13392"
                     /db_xref="CDD:275427"
     Region          <2253..>2616
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     CDS             1..2733
                     /gene="AKAP13"
                     /coded_by="XM_061158642.1:225..8426"
                     /db_xref="GeneID:133067756"
ORIGIN      
        1 mklnpqqapl ygdcvvtvll aeedkveddv vfylvfsgst lhhctstrkv ssntletiap
       61 ghdccetvkv llcaskeglp vfvvaeedfq fiqdeaydaa qflatsagnq qalnftrfld
      121 rsgppstdvn sldekvalaf rhlklpaewn vlgtdatshd ggpretlmhf avrlgllrlt
      181 wfllqkpggr galsihnqeg atpvslaler gyhklhrllt eedagepdsw sslsyeipyg
      241 dcsvrhhrel dvymltsese phqepplpgd sctghifklm niqqqlmktn lkqmdsltps
      301 avtaqdpsgp phdqdadghf lpcvseptas lqlaspgaae scqrcrgstv gqtegscdlp
      361 gvateedtdp scrkrstgva rtggevgpap atdpgaasap dscvqslpdg rgegpeglps
      421 cgvrddettf lagatdlasp gsilqgavaq acsggklvva spagasapea agegehglmh
      481 pdaaimgnml eveesmkkrf edssistaga sdgkaadepv dgaslpdsvl aaspldankp
      541 aesilaisng kavidqtaet etsksceesa htpgaqnlql vpaaagdevs eglqpntpla
      601 svcapgspsd ltlpgphkdv tpnpkseves sgghsqnses picsaaggdk lctapecqps
      661 rgtssgvspa ehrddtapqp estttgqlgt rppptarcps gpqasstqit pdtperveas
      721 lqvsdkesqg ealkvetssa dpaevvphpq aappkaekeg asgpavtpgg tlslagspgs
      781 esvtkddals lvpsqsekgr aalqphtdgg dgpdgdarrp eeqppeggaa algpppaald
      841 pppgmgnagp gglageqerp slsaapetla vegttasall pggqaaateg gktqvvpegp
      901 ggegkartcp atgdgplcsg asrgecrppp papeapgvpe epgaaacaed ralqpgsspg
      961 tplarlhaet kpnkevapaa srptgggath slvppgagla adssqdapga epsssapapd
     1021 llaggpkapn cspassvpdv eventpslgk sagcevsgda vlddarvhgl qealgagtkd
     1081 ishnapdtls cqeenmilgl pgaspatgvt npqgstppel vappggekkl egadcgsvgp
     1141 qeaqgdskth hdplqpvgge rppemgpsge argapalpct vstkalhrpe gadsieeaas
     1201 rivdsvierv kasgalmtgg alghrspprp peagpgtept apasagetsa lqpaetppvs
     1261 sgggeasgsl eqcfagseep emilpvqgpa petempdtka edevdflsnt ressvseeaa
     1321 lgnrtstpev kqgpktqain renwctvepc pdaasllapt qrpecdsfld vglgrecask
     1381 pgvlkresgs dsdlfhspge dvdsivfskp eeeqlacdvt gsssstddta sldqhsshgs
     1441 dvslpqvssl nrsrdpqcln gfyshglgae gresesepag sgemeeeemd sitevpsscs
     1501 vlrssmrsls pfrrhswgpg knaasdaemn hrsfsleglt ggagignkps sslegnssnt
     1561 kelrhpfsgq ergdslvsls eedlesgqre hrmfnqqtch rskqqgfnyc tsaisspltk
     1621 sfslttishs gldssrpfhs tssnltgsit eenfnflpqs pkkdfeiksg tkvsrtfsyi
     1681 knkmssskks kekekekdki kekekdskek ekdkktvngh afssisvvgp fgchqcmksf
     1741 tskdaytcan cgafvhkgcr eslsscakvk mkqpkgnlqa hdtsslptvi mrskssqpke
     1801 rprsavllad ettaapvfan rrsqqstmls ksvsiqniag vgndenisnt wkflshstds
     1861 lnkiskvnes tesltdegvg tdmnegqlmg dfeteskqle aeswsqivds kflkqhkkdv
     1921 vkrqeviyel mqtefhhlrt lkimsdvysr gmmadllfeq qmveklfpcl delisihsqf
     1981 fqrilerkkd slvdkseknf lirrigdvlv hqfsgenaer lkktygkfcg qhnqsvnyfk
     2041 dlhtkdkrfq afvkkkmsss vvrrlgipec illvtqritk ypvlfqrilq ctkdneaeqq
     2101 dltqslglvk evisavdskv asyekkvrln eiytktdsks imrmksgqmf akedlrrkkl
     2161 vrdgsvflks atgrlkevqa vlltdilvfl qekdqkyvfa sldqkstvis lkklivreva
     2221 heekglflis mgmkdpemve vhasskeern swiqiiqdti ntlnrdedeg ipseneeekk
     2281 mldtkarelk eqlqqkdqqi lllleekevi frdmtecstp lpedcspths crtlfrsste
     2341 ealkggplmk saineveilq glvsgslrgs lgqvvsspse qegvvgpvsl prraetfggf
     2401 dshqmnaskg gekeegddgq dlrrtesdsg lkkggnanlv fmlkrnseqv iqsvvhlhel
     2461 lstlqgvvlq qdsyiedqkl llseraltrt asrpsslieq ekqrslerqr qdlanlqrqq
     2521 aqhqeerrrr erewearera laerearlaq redelrrgrq dlererdell qrkgayqgdl
     2581 erlraaqrll ereqeqlrrd serlsqvsyq ntkllripsf spnpeetpsp papsiaksgs
     2641 ldselsvspk rnsmsrthke kgpfhmlgsa sqtnrapeaq sqtpvststs trlfglakpk
     2701 ekkekkkkgk gsrsqpgdgp asevpaegee ifc
//
LOCUS       XP_061014626            2731 aa            linear   MAM 02-DEC-2023
DEFINITION  A-kinase anchor protein 13 isoform X6 [Dama dama].
ACCESSION   XP_061014626
VERSION     XP_061014626.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158643.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2731
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2731
                     /product="A-kinase anchor protein 13 isoform X6"
                     /calculated_mol_wt=291895
     Region          <296..917
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          854..>1258
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          1716..1772
                     /region_name="C1_AKAP13"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in A-kinase anchor protein 13 (AKAP-13) and similar
                     proteins; cd20878"
                     /db_xref="CDD:410428"
     Region          1921..2115
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous
                     (DH) domain. It appears that PH domains invariably occur
                     C-terminal to RhoGEF/DH domains; cd00160"
                     /db_xref="CDD:238091"
     Site            order(1927,1931,2038,2066..2067,2070..2071,2073..2074,
                     2077..2078,2081..2082,2085,2111,2115)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          2158..2260
                     /region_name="PH_AKAP13"
                     /note="A-kinase anchoring protein 13 Pleckstrin homology
                     (PH) domain; cd13392"
                     /db_xref="CDD:275427"
     Region          <2251..>2614
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     CDS             1..2731
                     /gene="AKAP13"
                     /coded_by="XM_061158643.1:225..8420"
                     /db_xref="GeneID:133067756"
ORIGIN      
        1 mklnpqqapl ygdcvvtvll aeedkveddv vfylvfsgst lhhctstrkv ssntletiap
       61 ghdccetvkv llcaskeglp vfvvaeedfq fiqdeaydaa qflatsagnq qalnftrfld
      121 rsgppstdvn sldekvalaf rhlklpaewn vlgtdatshd ggpretlmhf avrlgllrlt
      181 wfllqkpggr galsihnqeg atpvslaler gyhklhrllt eedagepdsw sslsyeipyg
      241 dcsvrhhrel dvymltsese phqepplpgd sctghifklm niqqqlmktn lkqmdsltps
      301 avtaqdpsgp phdqdadghf lpcvseptas lqlaspgaae scqrcrgstv gqtegscdlp
      361 gvateedtdp scrkrstgva rtggevgpap atdpgaasap dscvqslpdg rgegpeglps
      421 cgvrddettf lagatdlasp gsilqgavaq acsggklvva spagasapea agegehglmh
      481 pdaaimgnml eveesmkkrf edssistaga sdgkaadepv dgaslpdsvl aaspldankp
      541 aesilaisng kavidqtaet etsksceesa htpgaqnlql vpaaagdevs eglqpntpla
      601 svcapgspsd ltlpgphkdv tpnpkseves sgghsqnses picsaaggdk lctapecqps
      661 rgtssgvspa ehrddtapqp estttgqlgt rppptarcps gpqasstqit pdtperveas
      721 lqvsdkesqg ealkvetssa dpaevvphpq aappkaekeg asgpavtpgg tlslagspgs
      781 esvtkddals lvpsqsekgr aalqphtdgg dgpdgdarrp eeqppeggaa algpppaald
      841 pppgmgnagp gglageqerp slsaapetla vegttasall pggqaaateg gktqvvpegp
      901 ggegkartcp atgdgplcsg asrgecrppp papeapgvpe epgaaacaed ralqpgsspg
      961 tplarlhaet kpnkevapaa srptgggath slvppgagla adssqdapga epsssapapd
     1021 llaggpkapn cspassvpdv eventpslgk sagcevsgda vlddarvhgl qealgagtkd
     1081 ishnapdtls cqeenmilgl pgaspatgvt npqgstppel vappggekkl egadcgsvgp
     1141 qeaqgdskth hdplqpvgge rppemgpsge argapalpct vstkalhrpe gadsieeaas
     1201 rivdsvierv kasgalmtgg alghrspprp peagpgtept apasagetsa lqpaetppvs
     1261 sgggeasgsl eqcfagseep emilpvqgpa petempdtka edevdflsnt ressvseeaa
     1321 lgnrtstpev kqgpktqain renwctvepc pdaasllapt qrpecdsfld vglgrecask
     1381 pgvlkresgs dsdlfhspge dvdsivfskp eeeqlacdvt gsssstddta sldqhsshgs
     1441 dvslpqvssl nrsrdpqcln gfyshglgae gresesepag sgemeeeemd sitevpsscs
     1501 vlrssmrsls pfrrhswgpg knaasdaemn hrsfsleglt ggagignkps sslegnssnt
     1561 kelrhpfsgq ergdslvsls eedlesgqre hrmfnqqtch rskqqgfnyc tsaisspltk
     1621 sfslttishs gldssrpfhs tssnltgsit eenfnflpqs pkkdfeiksg tkvsrtfsyi
     1681 knkmssskks kekekekdki kekekdskek ekdkktvngh afssisvvgp fgchqcmksf
     1741 tskdaytcan cgafvhkgcr eslsscakvk mkqpkgnlqa hdtsslptvi mrskssqpke
     1801 rprsavllad ettaapvfan rrsqqstmls ksvsiqniag vgndenisnt wkflshstds
     1861 lnkiskvnes tesltdegtd mnegqlmgdf eteskqleae swsqivdskf lkqhkkdvvk
     1921 rqeviyelmq tefhhlrtlk imsdvysrgm madllfeqqm veklfpclde lisihsqffq
     1981 rilerkkdsl vdkseknfli rrigdvlvhq fsgenaerlk ktygkfcgqh nqsvnyfkdl
     2041 htkdkrfqaf vkkkmsssvv rrlgipecil lvtqritkyp vlfqrilqct kdneaeqqdl
     2101 tqslglvkev isavdskvas yekkvrlnei ytktdsksim rmksgqmfak edlrrkklvr
     2161 dgsvflksat grlkevqavl ltdilvflqe kdqkyvfasl dqkstvislk klivrevahe
     2221 ekglflismg mkdpemvevh asskeernsw iqiiqdtint lnrdedegip seneeekkml
     2281 dtkarelkeq lqqkdqqill lleekevifr dmtecstplp edcspthscr tlfrssteea
     2341 lkggplmksa ineveilqgl vsgslrgslg qvvsspseqe gvvgpvslpr raetfggfds
     2401 hqmnaskgge keegddgqdl rrtesdsglk kggnanlvfm lkrnseqviq svvhlhells
     2461 tlqgvvlqqd syiedqklll seraltrtas rpsslieqek qrslerqrqd lanlqrqqaq
     2521 hqeerrrrer ewearerala erearlaqre delrrgrqdl ererdellqr kgayqgdler
     2581 lraaqrller eqeqlrrdse rlsqvsyqnt kllripsfsp npeetpsppa psiaksgsld
     2641 selsvspkrn smsrthkekg pfhmlgsasq tnrapeaqsq tpvstststr lfglakpkek
     2701 kekkkkgkgs rsqpgdgpas evpaegeeif c
//
LOCUS       XP_061014627            2565 aa            linear   MAM 02-DEC-2023
DEFINITION  A-kinase anchor protein 13 isoform X7 [Dama dama].
ACCESSION   XP_061014627
VERSION     XP_061014627.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158644.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2565
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2565
                     /product="A-kinase anchor protein 13 isoform X7"
                     /calculated_mol_wt=273797
     Region          <88..709
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          646..>1050
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          1548..1604
                     /region_name="C1_AKAP13"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in A-kinase anchor protein 13 (AKAP-13) and similar
                     proteins; cd20878"
                     /db_xref="CDD:410428"
     Region          1755..1949
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous
                     (DH) domain. It appears that PH domains invariably occur
                     C-terminal to RhoGEF/DH domains; cd00160"
                     /db_xref="CDD:238091"
     Site            order(1761,1765,1872,1900..1901,1904..1905,1907..1908,
                     1911..1912,1915..1916,1919,1945,1949)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          1992..2094
                     /region_name="PH_AKAP13"
                     /note="A-kinase anchoring protein 13 Pleckstrin homology
                     (PH) domain; cd13392"
                     /db_xref="CDD:275427"
     Region          <2085..>2448
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     CDS             1..2565
                     /gene="AKAP13"
                     /coded_by="XM_061158644.1:45..7742"
                     /db_xref="GeneID:133067756"
ORIGIN      
        1 mglryswcvg sreedagepd swsslsyeip ygdcsvrhhr eldvymltse sephqepplp
       61 gdsctghifk lmniqqqlmk tnlkqmdslt psavtaqdps gpphdqdadg hflpcvsept
      121 aslqlaspga aescqrcrgs tvgqtegscd lpgvateedt dpscrkrstg vartggevgp
      181 apatdpgaas apdscvqslp dgrgegpegl pscgvrddet tflagatdla spgsilqgav
      241 aqacsggklv vaspagasap eaagegehgl mhpdaaimgn mleveesmkk rfedssista
      301 gasdgkaade pvdgaslpds vlaaspldan kpaesilais ngkavidqta etetskscee
      361 sahtpgaqnl qlvpaaagde vseglqpntp lasvcapgsp sdltlpgphk dvtpnpksev
      421 essgghsqns espicsaagg dklctapecq psrgtssgvs paehrddtap qpestttgql
      481 gtrppptarc psgpqasstq itpdtperve aslqvsdkes qgealkvets sadpaevvph
      541 pqaappkaek egasgpavtp ggtlslagsp gsesvtkdda lslvpsqsek graalqphtd
      601 ggdgpdgdar rpeeqppegg aaalgpppaa ldpppgmgna gpgglageqe rpslsaapet
      661 lavegttasa llpggqaaat eggktqvvpe gpggegkart cpatgdgplc sgasrgecrp
      721 pppapeapgv peepgaaaca edralqpgss pgtplarlha etkpnkevap aasrptggga
      781 thslvppgag laadssqdap gaepsssapa pdllaggpka pncspassvp dveventpsl
      841 gksagcevsg davlddarvh glqealgagt kdishnapdt lscqeenmil glpgaspatg
      901 vtnpqgstpp elvappggek klegadcgsv gpqeaqgdsk thhdplqpvg gerppemgps
      961 geargapalp ctvstkalhr pegadsieea asrivdsvie rvkasgalmt ggalghrspp
     1021 rppeagpgte ptapasaget salqpaetpp vssgggeasg sleqcfagse epemilpvqg
     1081 papetempdt kaedevdfls ntressvsee aalgnrtstp evkqgpktqa inrenwctve
     1141 pcpdaaslla ptqrpecdsf ldvglgreca skpgvlkres gsdsdlfhsp gedvdsivfs
     1201 kpeeeqlacd vtgsssstdd tasldqhssh gsdvslpqvs slnrsrdpqc lngfyshglg
     1261 aegresesep agsgemeeee mdsitevpss csvlrssmrs lspfrrhswg pgknaasdae
     1321 mnhrssmrvl gdvvrrppih rrsmswcpsg vqysaalsad fnyrsfsleg ltggagignk
     1381 pssslegnss ntkelrhpfs gqergdslvs lseedlesgq rehrmfnqqt chrskqqgfn
     1441 yctsaisspl tksfslttis hsgldssrpf hstssnltgs iteenfnflp qspkkdfeik
     1501 sgtkvsrtfs yiknkmsssk kskekekekd kikekekdsk ekekdkktvn ghafssisvv
     1561 gpfgchqcmk sftskdaytc ancgafvhkg creslsscak vkmkqpkgnl qahdtsslpt
     1621 vimrskssqp kerprsavll adettaapvf anrrsqqstm lsksvsiqni agvgndenis
     1681 ntwkflshst dslnkiskvn estesltdeg vgtdmnegql mgdfeteskq leaeswsqiv
     1741 dskflkqhkk dvvkrqeviy elmqtefhhl rtlkimsdvy srgmmadllf eqqmveklfp
     1801 cldelisihs qffqrilerk kdslvdksek nflirrigdv lvhqfsgena erlkktygkf
     1861 cgqhnqsvny fkdlhtkdkr fqafvkkkms ssvvrrlgip ecillvtqri tkypvlfqri
     1921 lqctkdneae qqdltqslgl vkevisavds kvasyekkvr lneiytktds ksimrmksgq
     1981 mfakedlrrk klvrdgsvfl ksatgrlkev qavlltdilv flqekdqkyv fasldqkstv
     2041 islkklivre vaheekglfl ismgmkdpem vevhasskee rnswiqiiqd tintlnrded
     2101 egipseneee kkmldtkare lkeqlqqkdq qilllleeke vifrdmtecs tplpedcspt
     2161 hscrtlfrss teealkggpl mksainevei lqglvsgslr gslgqvvssp seqegvvgpv
     2221 slprraetfg gfdshqmnas kggekeegdd gqdlrrtesd sglkkggnan lvfmlkrnse
     2281 qviqsvvhlh ellstlqgvv lqqdsyiedq klllseralt rtasrpssli eqekqrsler
     2341 qrqdlanlqr qqaqhqeerr rrereweare ralaerearl aqredelrrg rqdlererde
     2401 llqrkgayqg dlerlraaqr llereqeqlr rdserlsqvs yqntkllrip sfspnpeetp
     2461 sppapsiaks gsldselsvs pkrnsmsrth kekgpfhmlg sasqtnrape aqsqtpvsts
     2521 tstrlfglak pkekkekkkk gkgsrsqpgd gpasevpaeg eeifc
//
LOCUS       XP_061014628            2520 aa            linear   MAM 02-DEC-2023
DEFINITION  A-kinase anchor protein 13 isoform X8 [Dama dama].
ACCESSION   XP_061014628
VERSION     XP_061014628.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158645.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2520
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2520
                     /product="A-kinase anchor protein 13 isoform X8"
                     /calculated_mol_wt=268577
     Region          <43..664
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          601..>1005
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          1503..1559
                     /region_name="C1_AKAP13"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in A-kinase anchor protein 13 (AKAP-13) and similar
                     proteins; cd20878"
                     /db_xref="CDD:410428"
     Region          1710..1904
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous
                     (DH) domain. It appears that PH domains invariably occur
                     C-terminal to RhoGEF/DH domains; cd00160"
                     /db_xref="CDD:238091"
     Site            order(1716,1720,1827,1855..1856,1859..1860,1862..1863,
                     1866..1867,1870..1871,1874,1900,1904)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          1947..2049
                     /region_name="PH_AKAP13"
                     /note="A-kinase anchoring protein 13 Pleckstrin homology
                     (PH) domain; cd13392"
                     /db_xref="CDD:275427"
     Region          <2040..>2403
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     CDS             1..2520
                     /gene="AKAP13"
                     /coded_by="XM_061158645.1:184..7746"
                     /db_xref="GeneID:133067756"
ORIGIN      
        1 mltsesephq epplpgdsct ghifklmniq qqlmktnlkq mdsltpsavt aqdpsgpphd
       61 qdadghflpc vseptaslql aspgaaescq rcrgstvgqt egscdlpgva teedtdpscr
      121 krstgvartg gevgpapatd pgaasapdsc vqslpdgrge gpeglpscgv rddettflag
      181 atdlaspgsi lqgavaqacs ggklvvaspa gasapeaage gehglmhpda aimgnmleve
      241 esmkkrfeds sistagasdg kaadepvdga slpdsvlaas pldankpaes ilaisngkav
      301 idqtaetets ksceesahtp gaqnlqlvpa aagdevsegl qpntplasvc apgspsdltl
      361 pgphkdvtpn pksevessgg hsqnsespic saaggdklct apecqpsrgt ssgvspaehr
      421 ddtapqpest ttgqlgtrpp ptarcpsgpq asstqitpdt perveaslqv sdkesqgeal
      481 kvetssadpa evvphpqaap pkaekegasg pavtpggtls lagspgsesv tkddalslvp
      541 sqsekgraal qphtdggdgp dgdarrpeeq ppeggaaalg pppaaldppp gmgnagpggl
      601 ageqerpsls aapetlaveg ttasallpgg qaaateggkt qvvpegpgge gkartcpatg
      661 dgplcsgasr gecrppppap eapgvpeepg aaacaedral qpgsspgtpl arlhaetkpn
      721 kevapaasrp tgggathslv ppgaglaads sqdapgaeps ssapapdlla ggpkapncsp
      781 assvpdveve ntpslgksag cevsgdavld darvhglqea lgagtkdish napdtlscqe
      841 enmilglpga spatgvtnpq gstppelvap pggekklega dcgsvgpqea qgdskthhdp
      901 lqpvggerpp emgpsgearg apalpctvst kalhrpegad sieeaasriv dsviervkas
      961 galmtggalg hrspprppea gpgteptapa sagetsalqp aetppvssgg geasgsleqc
     1021 fagseepemi lpvqgpapet empdtkaede vdflsntres svseeaalgn rtstpevkqg
     1081 pktqainren wctvepcpda asllaptqrp ecdsfldvgl grecaskpgv lkresgsdsd
     1141 lfhspgedvd sivfskpeee qlacdvtgss sstddtasld qhsshgsdvs lpqvsslnrs
     1201 rdpqclngfy shglgaegre sesepagsge meeeemdsit evpsscsvlr ssmrslspfr
     1261 rhswgpgkna asdaemnhrs smrvlgdvvr rppihrrsms wcpsgvqysa alsadfnyrs
     1321 fslegltgga gignkpsssl egnssntkel rhpfsgqerg dslvslseed lesgqrehrm
     1381 fnqqtchrsk qqgfnyctsa isspltksfs lttishsgld ssrpfhstss nltgsiteen
     1441 fnflpqspkk dfeiksgtkv srtfsyiknk mssskkskek ekekdkikek ekdskekekd
     1501 kktvnghafs sisvvgpfgc hqcmksftsk daytcancga fvhkgcresl sscakvkmkq
     1561 pkgnlqahdt sslptvimrs kssqpkerpr savlladett aapvfanrrs qqstmlsksv
     1621 siqniagvgn denisntwkf lshstdslnk iskvnestes ltdegvgtdm negqlmgdfe
     1681 teskqleaes wsqivdskfl kqhkkdvvkr qeviyelmqt efhhlrtlki msdvysrgmm
     1741 adllfeqqmv eklfpcldel isihsqffqr ilerkkdslv dkseknflir rigdvlvhqf
     1801 sgenaerlkk tygkfcgqhn qsvnyfkdlh tkdkrfqafv kkkmsssvvr rlgipecill
     1861 vtqritkypv lfqrilqctk dneaeqqdlt qslglvkevi savdskvasy ekkvrlneiy
     1921 tktdsksimr mksgqmfake dlrrkklvrd gsvflksatg rlkevqavll tdilvflqek
     1981 dqkyvfasld qkstvislkk livrevahee kglflismgm kdpemvevha sskeernswi
     2041 qiiqdtintl nrdedegips eneeekkmld tkarelkeql qqkdqqilll leekevifrd
     2101 mtecstplpe dcspthscrt lfrssteeal kggplmksai neveilqglv sgslrgslgq
     2161 vvsspseqeg vvgpvslprr aetfggfdsh qmnaskggek eegddgqdlr rtesdsglkk
     2221 ggnanlvfml krnseqviqs vvhlhellst lqgvvlqqds yiedqkllls eraltrtasr
     2281 psslieqekq rslerqrqdl anlqrqqaqh qeerrrrere weareralae rearlaqred
     2341 elrrgrqdle rerdellqrk gayqgdlerl raaqrllere qeqlrrdser lsqvsyqntk
     2401 llripsfspn peetpsppap siaksgslds elsvspkrns msrthkekgp fhmlgsasqt
     2461 nrapeaqsqt pvstststrl fglakpkekk ekkkkgkgsr sqpgdgpase vpaegeeifc
//
LOCUS       XP_061014629             589 aa            linear   MAM 02-DEC-2023
DEFINITION  kelch-like protein 25 [Dama dama].
ACCESSION   XP_061014629
VERSION     XP_061014629.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158646.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..589
                     /product="kelch-like protein 25"
                     /calculated_mol_wt=65632
     Region          24..151
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          60..575
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          144..242
                     /region_name="BACK"
                     /note="BACK (BTB and C-terminal Kelch) domain; cl28903"
                     /db_xref="CDD:475122"
     Region          330..374
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          378..431
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          434..480
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          482..525
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          528..573
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..589
                     /gene="KLHL25"
                     /coded_by="XM_061158646.1:185..1954"
                     /db_xref="GeneID:133067759"
ORIGIN      
        1 msvsvhetrk srgstgsmni tlfhkashpd cvlahlntlr khrmftdvtl wagdrafpch
       61 ravlaassry feamfshglr eshddtvnfq dnlhpevlel lldfayssri vineenaesl
      121 leagdmlqfh dvrdaaaefl eknlfpsncl gmmllsdahq crrlyefswr mclvhfeavr
      181 qsddfnslsk dtlmdlvssd eleaedervv feavlqwvrh dleqrkahlp ellrgvrlal
      241 lpsdclkeav sgdallmade rtrllvdeal rckarilqnd gvvtspcarp rraghtllil
      301 ggqtfmcdki yqvdhkakei ipkadlpspr kefsasaigc kvyvtggrgs engvskdvwv
      361 yntvheewsk aapmliarfg hgsaelencl yvvgghtsla gvfpaspsvs lkqvekydpg
      421 ankwtmvapl rdgvsnaavv saklklfvfg gtsihrdmvs kvqcydpsen rwsikaecpq
      481 pwrytaaavl gsqifimggd teftaasayr fdcesnqwtr igdmtakrms chalasgnkl
      541 yvvggyfgtq rcktldcydp tsdtwncvtt vpysliptaf vstwkhlpa
//
LOCUS       XP_061014630             589 aa            linear   MAM 02-DEC-2023
DEFINITION  kelch-like protein 25 [Dama dama].
ACCESSION   XP_061014630
VERSION     XP_061014630.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158647.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..589
                     /product="kelch-like protein 25"
                     /calculated_mol_wt=65632
     Region          24..151
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          60..575
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          144..242
                     /region_name="BACK"
                     /note="BACK (BTB and C-terminal Kelch) domain; cl28903"
                     /db_xref="CDD:475122"
     Region          330..374
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          378..431
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          434..480
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          482..525
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          528..573
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..589
                     /gene="KLHL25"
                     /coded_by="XM_061158647.1:129..1898"
                     /db_xref="GeneID:133067759"
ORIGIN      
        1 msvsvhetrk srgstgsmni tlfhkashpd cvlahlntlr khrmftdvtl wagdrafpch
       61 ravlaassry feamfshglr eshddtvnfq dnlhpevlel lldfayssri vineenaesl
      121 leagdmlqfh dvrdaaaefl eknlfpsncl gmmllsdahq crrlyefswr mclvhfeavr
      181 qsddfnslsk dtlmdlvssd eleaedervv feavlqwvrh dleqrkahlp ellrgvrlal
      241 lpsdclkeav sgdallmade rtrllvdeal rckarilqnd gvvtspcarp rraghtllil
      301 ggqtfmcdki yqvdhkakei ipkadlpspr kefsasaigc kvyvtggrgs engvskdvwv
      361 yntvheewsk aapmliarfg hgsaelencl yvvgghtsla gvfpaspsvs lkqvekydpg
      421 ankwtmvapl rdgvsnaavv saklklfvfg gtsihrdmvs kvqcydpsen rwsikaecpq
      481 pwrytaaavl gsqifimggd teftaasayr fdcesnqwtr igdmtakrms chalasgnkl
      541 yvvggyfgtq rcktldcydp tsdtwncvtt vpysliptaf vstwkhlpa
//
LOCUS       XP_061014632             589 aa            linear   MAM 02-DEC-2023
DEFINITION  kelch-like protein 25 [Dama dama].
ACCESSION   XP_061014632
VERSION     XP_061014632.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158649.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..589
                     /product="kelch-like protein 25"
                     /calculated_mol_wt=65632
     Region          24..151
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          60..575
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          144..242
                     /region_name="BACK"
                     /note="BACK (BTB and C-terminal Kelch) domain; cl28903"
                     /db_xref="CDD:475122"
     Region          330..374
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          378..431
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          434..480
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          482..525
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          528..573
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..589
                     /gene="KLHL25"
                     /coded_by="XM_061158649.1:182..1951"
                     /db_xref="GeneID:133067759"
ORIGIN      
        1 msvsvhetrk srgstgsmni tlfhkashpd cvlahlntlr khrmftdvtl wagdrafpch
       61 ravlaassry feamfshglr eshddtvnfq dnlhpevlel lldfayssri vineenaesl
      121 leagdmlqfh dvrdaaaefl eknlfpsncl gmmllsdahq crrlyefswr mclvhfeavr
      181 qsddfnslsk dtlmdlvssd eleaedervv feavlqwvrh dleqrkahlp ellrgvrlal
      241 lpsdclkeav sgdallmade rtrllvdeal rckarilqnd gvvtspcarp rraghtllil
      301 ggqtfmcdki yqvdhkakei ipkadlpspr kefsasaigc kvyvtggrgs engvskdvwv
      361 yntvheewsk aapmliarfg hgsaelencl yvvgghtsla gvfpaspsvs lkqvekydpg
      421 ankwtmvapl rdgvsnaavv saklklfvfg gtsihrdmvs kvqcydpsen rwsikaecpq
      481 pwrytaaavl gsqifimggd teftaasayr fdcesnqwtr igdmtakrms chalasgnkl
      541 yvvggyfgtq rcktldcydp tsdtwncvtt vpysliptaf vstwkhlpa
//
LOCUS       XP_061014633             589 aa            linear   MAM 02-DEC-2023
DEFINITION  kelch-like protein 25 [Dama dama].
ACCESSION   XP_061014633
VERSION     XP_061014633.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158650.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..589
                     /product="kelch-like protein 25"
                     /calculated_mol_wt=65632
     Region          24..151
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          60..575
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          144..242
                     /region_name="BACK"
                     /note="BACK (BTB and C-terminal Kelch) domain; cl28903"
                     /db_xref="CDD:475122"
     Region          330..374
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          378..431
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          434..480
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          482..525
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          528..573
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..589
                     /gene="KLHL25"
                     /coded_by="XM_061158650.1:113..1882"
                     /db_xref="GeneID:133067759"
ORIGIN      
        1 msvsvhetrk srgstgsmni tlfhkashpd cvlahlntlr khrmftdvtl wagdrafpch
       61 ravlaassry feamfshglr eshddtvnfq dnlhpevlel lldfayssri vineenaesl
      121 leagdmlqfh dvrdaaaefl eknlfpsncl gmmllsdahq crrlyefswr mclvhfeavr
      181 qsddfnslsk dtlmdlvssd eleaedervv feavlqwvrh dleqrkahlp ellrgvrlal
      241 lpsdclkeav sgdallmade rtrllvdeal rckarilqnd gvvtspcarp rraghtllil
      301 ggqtfmcdki yqvdhkakei ipkadlpspr kefsasaigc kvyvtggrgs engvskdvwv
      361 yntvheewsk aapmliarfg hgsaelencl yvvgghtsla gvfpaspsvs lkqvekydpg
      421 ankwtmvapl rdgvsnaavv saklklfvfg gtsihrdmvs kvqcydpsen rwsikaecpq
      481 pwrytaaavl gsqifimggd teftaasayr fdcesnqwtr igdmtakrms chalasgnkl
      541 yvvggyfgtq rcktldcydp tsdtwncvtt vpysliptaf vstwkhlpa
//
LOCUS       XP_061014634             589 aa            linear   MAM 02-DEC-2023
DEFINITION  kelch-like protein 25 [Dama dama].
ACCESSION   XP_061014634
VERSION     XP_061014634.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158651.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..589
                     /product="kelch-like protein 25"
                     /calculated_mol_wt=65632
     Region          24..151
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          60..575
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          144..242
                     /region_name="BACK"
                     /note="BACK (BTB and C-terminal Kelch) domain; cl28903"
                     /db_xref="CDD:475122"
     Region          330..374
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          378..431
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          434..480
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          482..525
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          528..573
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..589
                     /gene="KLHL25"
                     /coded_by="XM_061158651.1:155..1924"
                     /db_xref="GeneID:133067759"
ORIGIN      
        1 msvsvhetrk srgstgsmni tlfhkashpd cvlahlntlr khrmftdvtl wagdrafpch
       61 ravlaassry feamfshglr eshddtvnfq dnlhpevlel lldfayssri vineenaesl
      121 leagdmlqfh dvrdaaaefl eknlfpsncl gmmllsdahq crrlyefswr mclvhfeavr
      181 qsddfnslsk dtlmdlvssd eleaedervv feavlqwvrh dleqrkahlp ellrgvrlal
      241 lpsdclkeav sgdallmade rtrllvdeal rckarilqnd gvvtspcarp rraghtllil
      301 ggqtfmcdki yqvdhkakei ipkadlpspr kefsasaigc kvyvtggrgs engvskdvwv
      361 yntvheewsk aapmliarfg hgsaelencl yvvgghtsla gvfpaspsvs lkqvekydpg
      421 ankwtmvapl rdgvsnaavv saklklfvfg gtsihrdmvs kvqcydpsen rwsikaecpq
      481 pwrytaaavl gsqifimggd teftaasayr fdcesnqwtr igdmtakrms chalasgnkl
      541 yvvggyfgtq rcktldcydp tsdtwncvtt vpysliptaf vstwkhlpa
//
LOCUS       XP_061014635             589 aa            linear   MAM 02-DEC-2023
DEFINITION  kelch-like protein 25 [Dama dama].
ACCESSION   XP_061014635
VERSION     XP_061014635.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158652.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..589
                     /product="kelch-like protein 25"
                     /calculated_mol_wt=65632
     Region          24..151
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          60..575
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          144..242
                     /region_name="BACK"
                     /note="BACK (BTB and C-terminal Kelch) domain; cl28903"
                     /db_xref="CDD:475122"
     Region          330..374
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          378..431
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          434..480
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          482..525
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          528..573
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..589
                     /gene="KLHL25"
                     /coded_by="XM_061158652.1:123..1892"
                     /db_xref="GeneID:133067759"
ORIGIN      
        1 msvsvhetrk srgstgsmni tlfhkashpd cvlahlntlr khrmftdvtl wagdrafpch
       61 ravlaassry feamfshglr eshddtvnfq dnlhpevlel lldfayssri vineenaesl
      121 leagdmlqfh dvrdaaaefl eknlfpsncl gmmllsdahq crrlyefswr mclvhfeavr
      181 qsddfnslsk dtlmdlvssd eleaedervv feavlqwvrh dleqrkahlp ellrgvrlal
      241 lpsdclkeav sgdallmade rtrllvdeal rckarilqnd gvvtspcarp rraghtllil
      301 ggqtfmcdki yqvdhkakei ipkadlpspr kefsasaigc kvyvtggrgs engvskdvwv
      361 yntvheewsk aapmliarfg hgsaelencl yvvgghtsla gvfpaspsvs lkqvekydpg
      421 ankwtmvapl rdgvsnaavv saklklfvfg gtsihrdmvs kvqcydpsen rwsikaecpq
      481 pwrytaaavl gsqifimggd teftaasayr fdcesnqwtr igdmtakrms chalasgnkl
      541 yvvggyfgtq rcktldcydp tsdtwncvtt vpysliptaf vstwkhlpa
//
LOCUS       XP_061014636             839 aa            linear   MAM 02-DEC-2023
DEFINITION  NT-3 growth factor receptor isoform X1 [Dama dama].
ACCESSION   XP_061014636
VERSION     XP_061014636.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158653.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..839
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..839
                     /product="NT-3 growth factor receptor isoform X1"
                     /calculated_mol_wt=94219
     Region          103..160
                     /region_name="LRR_8"
                     /note="Leucine rich repeat; pfam13855"
                     /db_xref="CDD:404697"
     Region          105..128
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          129..151
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          152..164
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          163..208
                     /region_name="LRRCT_2"
                     /note="Leucine rich repeat C-terminal motif; pfam16920"
                     /db_xref="CDD:465313"
     Region          214..299
                     /region_name="ig"
                     /note="Immunoglobulin domain; pfam00047"
                     /db_xref="CDD:395002"
     Region          227..231
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409568"
     Region          240..244
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409568"
     Region          266..270
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409568"
     Region          281..286
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409568"
     Region          294..297
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409568"
     Region          304..396
                     /region_name="IgI_TrKABC_d5"
                     /note="Fifth domain (immunoglobulin-like) of Trk receptors
                     TrkA, TrkB, and TrkC; member of the I-set of Ig
                     superfamily (IgSF) domains; cd04971"
                     /db_xref="CDD:409360"
     Region          305..311
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409360"
     Region          313..316
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409360"
     Region          319..327
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409360"
     Site            328
                     /site_type="other"
                     /note="interdomain interface [polypeptide binding]"
                     /db_xref="CDD:409360"
     Region          330..337
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409360"
     Region          340..343
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409360"
     Region          348..354
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409360"
     Site            order(353,366..367,370)
                     /site_type="other"
                     /note="receptor binding site [polypeptide binding]"
                     /db_xref="CDD:409360"
     Region          358..366
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409360"
     Region          374..382
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409360"
     Region          385..393
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409360"
     Region          532..832
                     /region_name="PTKc_TrkC"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     Tropomyosin Related Kinase C; cd05094"
                     /db_xref="CDD:270676"
     Site            order(544..548,552,570,572,617..620,623..624,679,683..684,
                     686,697,729..733,742,776)
                     /site_type="active"
                     /db_xref="CDD:270676"
     Site            order(544..545,547..548,552,570,572,617..620,623..624,
                     683..684,686,697)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270676"
     Site            order(679,683,729..733,742,776)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270676"
     Site            order(696..711,726..735)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270676"
     CDS             1..839
                     /gene="NTRK3"
                     /coded_by="XM_061158653.1:53..2572"
                     /db_xref="GeneID:133067760"
ORIGIN      
        1 mdvslcpakc sfwrifllgs vwldyvgsvl acpancvcsk teincrrpdd gnlfpllegq
       61 dsgnsngnas initdisrni tsihienwrg lhtlnavdme lytglqklti knsglrniqp
      121 rafaknphlr yinlssnrlt tlswqlfqtl slrelrleqn ffncscdirw mqlwqeqgea
      181 klnsqnlyci gadgsqlplf rmnisqcdlp eisvshanlt vregdnavit cngsgsplpd
      241 vdwivtglqs inthqtnlnw tnvhainltl vnvtsedngf tltciaenvv gmsnasvalt
      301 vhypprvvsl eepelrlehc iefvvrgnpp ptlhwlhngq plreskiihv eyyqegevse
      361 gcllfnkpth ynngnytlia knplgtanqt inghflkepf pestdnfvsf yevsptppit
      421 vthkpeedtf gvsiavglaa facvllvvlf iminkygrrs kfgmkgpvav isgeedsasp
      481 lhhinhgitt pssldagpdt vvigmtripv ienpqyfrqg hnchkpdtyv qhikrrdivl
      541 krelgegafg kvflaecynl sptkdkmlva vkalkdptla arkdfqreae lltnlqhehi
      601 vkfygvcgdg dplimvfeym khgdlnkflr ahgpdamilv dgqprqakge lglsqmlhia
      661 sqiasgmvyl asqhfvhrdl atrnclvgan llvkigdfgm srdvystdyy rlfnpsgndf
      721 ciwcevgght mlpirwmppe simyrkftte sdvwsfgvil weiftygkqp wfqlsntevi
      781 ecitqgrvle rprvcpkevy dvmlgcwqre pqqrlnikei ykilhalgka tpiyldilg
//
LOCUS       XP_061014637             839 aa            linear   MAM 02-DEC-2023
DEFINITION  NT-3 growth factor receptor isoform X1 [Dama dama].
ACCESSION   XP_061014637
VERSION     XP_061014637.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158654.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..839
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..839
                     /product="NT-3 growth factor receptor isoform X1"
                     /calculated_mol_wt=94219
     Region          103..160
                     /region_name="LRR_8"
                     /note="Leucine rich repeat; pfam13855"
                     /db_xref="CDD:404697"
     Region          105..128
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          129..151
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          152..164
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          163..208
                     /region_name="LRRCT_2"
                     /note="Leucine rich repeat C-terminal motif; pfam16920"
                     /db_xref="CDD:465313"
     Region          214..299
                     /region_name="ig"
                     /note="Immunoglobulin domain; pfam00047"
                     /db_xref="CDD:395002"
     Region          227..231
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409568"
     Region          240..244
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409568"
     Region          266..270
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409568"
     Region          281..286
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409568"
     Region          294..297
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409568"
     Region          304..396
                     /region_name="IgI_TrKABC_d5"
                     /note="Fifth domain (immunoglobulin-like) of Trk receptors
                     TrkA, TrkB, and TrkC; member of the I-set of Ig
                     superfamily (IgSF) domains; cd04971"
                     /db_xref="CDD:409360"
     Region          305..311
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409360"
     Region          313..316
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409360"
     Region          319..327
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409360"
     Site            328
                     /site_type="other"
                     /note="interdomain interface [polypeptide binding]"
                     /db_xref="CDD:409360"
     Region          330..337
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409360"
     Region          340..343
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409360"
     Region          348..354
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409360"
     Site            order(353,366..367,370)
                     /site_type="other"
                     /note="receptor binding site [polypeptide binding]"
                     /db_xref="CDD:409360"
     Region          358..366
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409360"
     Region          374..382
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409360"
     Region          385..393
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409360"
     Region          532..832
                     /region_name="PTKc_TrkC"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     Tropomyosin Related Kinase C; cd05094"
                     /db_xref="CDD:270676"
     Site            order(544..548,552,570,572,617..620,623..624,679,683..684,
                     686,697,729..733,742,776)
                     /site_type="active"
                     /db_xref="CDD:270676"
     Site            order(544..545,547..548,552,570,572,617..620,623..624,
                     683..684,686,697)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270676"
     Site            order(679,683,729..733,742,776)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270676"
     Site            order(696..711,726..735)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270676"
     CDS             1..839
                     /gene="NTRK3"
                     /coded_by="XM_061158654.1:119..2638"
                     /db_xref="GeneID:133067760"
ORIGIN      
        1 mdvslcpakc sfwrifllgs vwldyvgsvl acpancvcsk teincrrpdd gnlfpllegq
       61 dsgnsngnas initdisrni tsihienwrg lhtlnavdme lytglqklti knsglrniqp
      121 rafaknphlr yinlssnrlt tlswqlfqtl slrelrleqn ffncscdirw mqlwqeqgea
      181 klnsqnlyci gadgsqlplf rmnisqcdlp eisvshanlt vregdnavit cngsgsplpd
      241 vdwivtglqs inthqtnlnw tnvhainltl vnvtsedngf tltciaenvv gmsnasvalt
      301 vhypprvvsl eepelrlehc iefvvrgnpp ptlhwlhngq plreskiihv eyyqegevse
      361 gcllfnkpth ynngnytlia knplgtanqt inghflkepf pestdnfvsf yevsptppit
      421 vthkpeedtf gvsiavglaa facvllvvlf iminkygrrs kfgmkgpvav isgeedsasp
      481 lhhinhgitt pssldagpdt vvigmtripv ienpqyfrqg hnchkpdtyv qhikrrdivl
      541 krelgegafg kvflaecynl sptkdkmlva vkalkdptla arkdfqreae lltnlqhehi
      601 vkfygvcgdg dplimvfeym khgdlnkflr ahgpdamilv dgqprqakge lglsqmlhia
      661 sqiasgmvyl asqhfvhrdl atrnclvgan llvkigdfgm srdvystdyy rlfnpsgndf
      721 ciwcevgght mlpirwmppe simyrkftte sdvwsfgvil weiftygkqp wfqlsntevi
      781 ecitqgrvle rprvcpkevy dvmlgcwqre pqqrlnikei ykilhalgka tpiyldilg
//
LOCUS       XP_061014638             825 aa            linear   MAM 02-DEC-2023
DEFINITION  NT-3 growth factor receptor isoform X2 [Dama dama].
ACCESSION   XP_061014638
VERSION     XP_061014638.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158655.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..825
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..825
                     /product="NT-3 growth factor receptor isoform X2"
                     /calculated_mol_wt=92593
     Region          103..160
                     /region_name="LRR_8"
                     /note="Leucine rich repeat; pfam13855"
                     /db_xref="CDD:404697"
     Region          105..128
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          129..151
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          152..164
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          163..208
                     /region_name="LRRCT_2"
                     /note="Leucine rich repeat C-terminal motif; pfam16920"
                     /db_xref="CDD:465313"
     Region          214..299
                     /region_name="ig"
                     /note="Immunoglobulin domain; pfam00047"
                     /db_xref="CDD:395002"
     Region          227..231
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409568"
     Region          240..244
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409568"
     Region          266..270
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409568"
     Region          281..286
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409568"
     Region          294..297
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409568"
     Region          304..396
                     /region_name="IgI_TrKABC_d5"
                     /note="Fifth domain (immunoglobulin-like) of Trk receptors
                     TrkA, TrkB, and TrkC; member of the I-set of Ig
                     superfamily (IgSF) domains; cd04971"
                     /db_xref="CDD:409360"
     Region          305..311
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409360"
     Region          313..316
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409360"
     Region          319..327
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409360"
     Site            328
                     /site_type="other"
                     /note="interdomain interface [polypeptide binding]"
                     /db_xref="CDD:409360"
     Region          330..337
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409360"
     Region          340..343
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409360"
     Region          348..354
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409360"
     Site            order(353,366..367,370)
                     /site_type="other"
                     /note="receptor binding site [polypeptide binding]"
                     /db_xref="CDD:409360"
     Region          358..366
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409360"
     Region          374..382
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409360"
     Region          385..393
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409360"
     Region          532..818
                     /region_name="PTKc_TrkC"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     Tropomyosin Related Kinase C; cd05094"
                     /db_xref="CDD:270676"
     Site            order(544..548,552,570,572,617..620,623..624,679,683..684,
                     686,697,715..719,728,762)
                     /site_type="active"
                     /db_xref="CDD:270676"
     Site            order(544..545,547..548,552,570,572,617..620,623..624,
                     683..684,686,697)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270676"
     Site            order(679,683,715..719,728,762)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270676"
     Site            696..721
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270676"
     CDS             1..825
                     /gene="NTRK3"
                     /coded_by="XM_061158655.1:51..2528"
                     /db_xref="GeneID:133067760"
ORIGIN      
        1 mdvslcpakc sfwrifllgs vwldyvgsvl acpancvcsk teincrrpdd gnlfpllegq
       61 dsgnsngnas initdisrni tsihienwrg lhtlnavdme lytglqklti knsglrniqp
      121 rafaknphlr yinlssnrlt tlswqlfqtl slrelrleqn ffncscdirw mqlwqeqgea
      181 klnsqnlyci gadgsqlplf rmnisqcdlp eisvshanlt vregdnavit cngsgsplpd
      241 vdwivtglqs inthqtnlnw tnvhainltl vnvtsedngf tltciaenvv gmsnasvalt
      301 vhypprvvsl eepelrlehc iefvvrgnpp ptlhwlhngq plreskiihv eyyqegevse
      361 gcllfnkpth ynngnytlia knplgtanqt inghflkepf pestdnfvsf yevsptppit
      421 vthkpeedtf gvsiavglaa facvllvvlf iminkygrrs kfgmkgpvav isgeedsasp
      481 lhhinhgitt pssldagpdt vvigmtripv ienpqyfrqg hnchkpdtyv qhikrrdivl
      541 krelgegafg kvflaecynl sptkdkmlva vkalkdptla arkdfqreae lltnlqhehi
      601 vkfygvcgdg dplimvfeym khgdlnkflr ahgpdamilv dgqprqakge lglsqmlhia
      661 sqiasgmvyl asqhfvhrdl atrnclvgan llvkigdfgm srdvystdyy rvgghtmlpi
      721 rwmppesimy rkfttesdvw sfgvilweif tygkqpwfql snteviecit qgrvlerprv
      781 cpkevydvml gcwqrepqqr lnikeiykil halgkatpiy ldilg
//
LOCUS       XP_061014639             612 aa            linear   MAM 02-DEC-2023
DEFINITION  NT-3 growth factor receptor isoform X3 [Dama dama].
ACCESSION   XP_061014639
VERSION     XP_061014639.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158656.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..612
                     /product="NT-3 growth factor receptor isoform X3"
                     /calculated_mol_wt=68244
     Region          31..>51
                     /region_name="LRRNT"
                     /note="Leucine rich repeat N-terminal domain; pfam01462"
                     /db_xref="CDD:396168"
     Region          103..160
                     /region_name="LRR_8"
                     /note="Leucine rich repeat; pfam13855"
                     /db_xref="CDD:404697"
     Region          105..128
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          129..151
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          152..164
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          163..208
                     /region_name="LRRCT_2"
                     /note="Leucine rich repeat C-terminal motif; pfam16920"
                     /db_xref="CDD:465313"
     Region          214..299
                     /region_name="ig"
                     /note="Immunoglobulin domain; pfam00047"
                     /db_xref="CDD:395002"
     Region          227..231
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409568"
     Region          240..244
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409568"
     Region          266..270
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409568"
     Region          281..286
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409568"
     Region          294..297
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409568"
     Region          304..396
                     /region_name="IgI_TrKABC_d5"
                     /note="Fifth domain (immunoglobulin-like) of Trk receptors
                     TrkA, TrkB, and TrkC; member of the I-set of Ig
                     superfamily (IgSF) domains; cd04971"
                     /db_xref="CDD:409360"
     Region          305..311
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409360"
     Region          313..316
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409360"
     Region          319..327
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409360"
     Site            328
                     /site_type="other"
                     /note="interdomain interface [polypeptide binding]"
                     /db_xref="CDD:409360"
     Region          330..337
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409360"
     Region          340..343
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409360"
     Region          348..354
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409360"
     Site            order(353,366..367,370)
                     /site_type="other"
                     /note="receptor binding site [polypeptide binding]"
                     /db_xref="CDD:409360"
     Region          358..366
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409360"
     Region          374..382
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409360"
     Region          385..393
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409360"
     CDS             1..612
                     /gene="NTRK3"
                     /coded_by="XM_061158656.1:51..1889"
                     /db_xref="GeneID:133067760"
ORIGIN      
        1 mdvslcpakc sfwrifllgs vwldyvgsvl acpancvcsk teincrrpdd gnlfpllegq
       61 dsgnsngnas initdisrni tsihienwrg lhtlnavdme lytglqklti knsglrniqp
      121 rafaknphlr yinlssnrlt tlswqlfqtl slrelrleqn ffncscdirw mqlwqeqgea
      181 klnsqnlyci gadgsqlplf rmnisqcdlp eisvshanlt vregdnavit cngsgsplpd
      241 vdwivtglqs inthqtnlnw tnvhainltl vnvtsedngf tltciaenvv gmsnasvalt
      301 vhypprvvsl eepelrlehc iefvvrgnpp ptlhwlhngq plreskiihv eyyqegevse
      361 gcllfnkpth ynngnytlia knplgtanqt inghflkepf pestdnfvsf yevsptppit
      421 vthkpeedtf gvsiavglaa facvllvvlf iminkygrrs kfgmkgpvav isgeedsasp
      481 lhhinhgitt pssldagpdt vvigmtripv ienpqyfrqg hnchkpdtwv fsnidnhgil
      541 nlkdnrdhlv psthyiyeep evqsgevsyp rshgfreiml npislpghsk plnhgiyved
      601 vnvyfskgrh gf
//
LOCUS       XP_061014640             567 aa            linear   MAM 02-DEC-2023
DEFINITION  NT-3 growth factor receptor isoform X4 [Dama dama].
ACCESSION   XP_061014640
VERSION     XP_061014640.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158657.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..567
                     /product="NT-3 growth factor receptor isoform X4"
                     /calculated_mol_wt=63014
     Region          31..>51
                     /region_name="LRRNT"
                     /note="Leucine rich repeat N-terminal domain; pfam01462"
                     /db_xref="CDD:396168"
     Region          103..160
                     /region_name="LRR_8"
                     /note="Leucine rich repeat; pfam13855"
                     /db_xref="CDD:404697"
     Region          105..128
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          129..151
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          152..164
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          163..208
                     /region_name="LRRCT_2"
                     /note="Leucine rich repeat C-terminal motif; pfam16920"
                     /db_xref="CDD:465313"
     Region          214..299
                     /region_name="ig"
                     /note="Immunoglobulin domain; pfam00047"
                     /db_xref="CDD:395002"
     Region          227..231
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409568"
     Region          240..244
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409568"
     Region          266..270
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409568"
     Region          281..286
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409568"
     Region          294..297
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409568"
     Region          304..396
                     /region_name="IgI_TrKABC_d5"
                     /note="Fifth domain (immunoglobulin-like) of Trk receptors
                     TrkA, TrkB, and TrkC; member of the I-set of Ig
                     superfamily (IgSF) domains; cd04971"
                     /db_xref="CDD:409360"
     Region          305..311
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409360"
     Region          313..316
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409360"
     Region          319..327
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409360"
     Site            328
                     /site_type="other"
                     /note="interdomain interface [polypeptide binding]"
                     /db_xref="CDD:409360"
     Region          330..337
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409360"
     Region          340..343
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409360"
     Region          348..354
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409360"
     Site            order(353,366..367,370)
                     /site_type="other"
                     /note="receptor binding site [polypeptide binding]"
                     /db_xref="CDD:409360"
     Region          358..366
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409360"
     Region          374..382
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409360"
     Region          385..393
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409360"
     CDS             1..567
                     /gene="NTRK3"
                     /coded_by="XM_061158657.1:52..1755"
                     /db_xref="GeneID:133067760"
ORIGIN      
        1 mdvslcpakc sfwrifllgs vwldyvgsvl acpancvcsk teincrrpdd gnlfpllegq
       61 dsgnsngnas initdisrni tsihienwrg lhtlnavdme lytglqklti knsglrniqp
      121 rafaknphlr yinlssnrlt tlswqlfqtl slrelrleqn ffncscdirw mqlwqeqgea
      181 klnsqnlyci gadgsqlplf rmnisqcdlp eisvshanlt vregdnavit cngsgsplpd
      241 vdwivtglqs inthqtnlnw tnvhainltl vnvtsedngf tltciaenvv gmsnasvalt
      301 vhypprvvsl eepelrlehc iefvvrgnpp ptlhwlhngq plreskiihv eyyqegevse
      361 gcllfnkpth ynngnytlia knplgtanqt inghflkepf pestdnfvsf yevsptppit
      421 vthkpeedtf gvsiavglaa facvllvvlf iminkygrrs kfgmkgpvav isgeedsasp
      481 lhhinhgitt pssldagpdt vvigmtripv ienpqyfrqg hnchkpdtcf reimlnpisl
      541 pghskplnhg iyvedvnvyf skgrhgf
//
LOCUS       XP_061014641             277 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein mL46 [Dama dama].
ACCESSION   XP_061014641
VERSION     XP_061014641.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158658.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..277
                     /product="large ribosomal subunit protein mL46"
                     /calculated_mol_wt=31736
     Region          43..139
                     /region_name="MRP-L46"
                     /note="39S mitochondrial ribosomal protein L46; pfam11788"
                     /db_xref="CDD:432074"
     Region          134..273
                     /region_name="NUDIX_MRP_L46"
                     /note="Mitochondrial ribosomal protein L46; cd04661"
                     /db_xref="CDD:467546"
     CDS             1..277
                     /gene="MRPL46"
                     /coded_by="XM_061158658.1:34..867"
                     /db_xref="GeneID:133067761"
ORIGIN      
        1 maaptrrtvl glarcwrrfe rpwslnsrsl tlaaapsnta spwrllgalc lqrppvvskq
       61 ltpmqeemaa llqqieiers lysdhelral deaeqlakkk gdlyeeedek nillvqdled
      121 mweqkflqfk pgaritdadv kndrsslhrk ldrnlillvk eklgdqdvwm lpqaewqpge
      181 tlrrtaertl atlsennmea kflgnapcgh ykfkfpqavr megslgakif ffkallltgd
      241 fspavekgrh vwaskeelgd ylkpkylaqv rrflldl
//
LOCUS       XP_061014642             197 aa            linear   MAM 02-DEC-2023
DEFINITION  small ribosomal subunit protein uS11m [Dama dama].
ACCESSION   XP_061014642
VERSION     XP_061014642.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158659.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..197
                     /product="small ribosomal subunit protein uS11m"
                     /calculated_mol_wt=20653
     Region          81..196
                     /region_name="RpsK"
                     /note="Ribosomal protein S11 [Translation, ribosomal
                     structure and biogenesis]; COG0100"
                     /db_xref="CDD:439870"
     CDS             1..197
                     /gene="MRPS11"
                     /coded_by="XM_061158659.1:92..685"
                     /db_xref="GeneID:133067763"
ORIGIN      
        1 mqvvrnagsw llrswawppt trivagvpgp tihmsaqqmq daaakqevek aetpapapsr
       61 ssfsiyppvp gqesslrwag kkfeeipiah ikasynntqi qvvsaahqpl arascgtegf
      121 rnakkgtgia aqtagiaaaa katgkgvthv rvvvkglgpg rlsaikgltm gglevisitd
      181 ntpiphngcr prkarrl
//
LOCUS       XP_061014643             550 aa            linear   MAM 02-DEC-2023
DEFINITION  DET1 homolog isoform X1 [Dama dama].
ACCESSION   XP_061014643
VERSION     XP_061014643.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158660.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..550
                     /product="DET1 homolog isoform X1"
                     /calculated_mol_wt=63690
     Region          142..547
                     /region_name="Det1"
                     /note="De-etiolated protein 1 Det1; pfam09737"
                     /db_xref="CDD:462868"
     CDS             1..550
                     /gene="DET1"
                     /coded_by="XM_061158660.1:141..1793"
                     /db_xref="GeneID:133067764"
ORIGIN      
        1 mdhhvstikp rriqnqnvih rlerrrissg kagthwhqvr vfhqnvfpnf tvvnvekppc
       61 flrkfspdgr yfiafssdqt sleiyeyqgc qaaedllqgy egeilangnd qrsvnirgrl
      121 ferffvllhi tnvaangehl nrecslftdd crcvivgsaa ylpdephppf yevyrnsesv
      181 tpnprspled yslhivdlht grlcdtrtfk cdkvvlshnq glylyknila ilsvqqqtih
      241 vfqvtpegtf idvrtigrfc yeddlltvsa vfpevqrdsq tgmanpfrdp finslkhrll
      301 vylwrraeqd gsamakrrff qyfdqlrqlr mwkmqllden hlfikytsed vvtlrvtdps
      361 qasffvvynm vtteviavfe ntsdellelf enfcdlfrna tlhsevqfpc sassnnfarq
      421 iqrrfkdtiv nakygghtea vrrllgqlpi saqsysgspy ldlslfsydd kwvsvmerpk
      481 tcgdhpirfy ardsgllkfe iqagllgrpi nhtvrrlvaf tfhpfepfai svqrtnaeyv
      541 vnfhmrhcct
//
LOCUS       XP_061014644             550 aa            linear   MAM 02-DEC-2023
DEFINITION  DET1 homolog isoform X1 [Dama dama].
ACCESSION   XP_061014644
VERSION     XP_061014644.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158661.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..550
                     /product="DET1 homolog isoform X1"
                     /calculated_mol_wt=63690
     Region          142..547
                     /region_name="Det1"
                     /note="De-etiolated protein 1 Det1; pfam09737"
                     /db_xref="CDD:462868"
     CDS             1..550
                     /gene="DET1"
                     /coded_by="XM_061158661.1:141..1793"
                     /db_xref="GeneID:133067764"
ORIGIN      
        1 mdhhvstikp rriqnqnvih rlerrrissg kagthwhqvr vfhqnvfpnf tvvnvekppc
       61 flrkfspdgr yfiafssdqt sleiyeyqgc qaaedllqgy egeilangnd qrsvnirgrl
      121 ferffvllhi tnvaangehl nrecslftdd crcvivgsaa ylpdephppf yevyrnsesv
      181 tpnprspled yslhivdlht grlcdtrtfk cdkvvlshnq glylyknila ilsvqqqtih
      241 vfqvtpegtf idvrtigrfc yeddlltvsa vfpevqrdsq tgmanpfrdp finslkhrll
      301 vylwrraeqd gsamakrrff qyfdqlrqlr mwkmqllden hlfikytsed vvtlrvtdps
      361 qasffvvynm vtteviavfe ntsdellelf enfcdlfrna tlhsevqfpc sassnnfarq
      421 iqrrfkdtiv nakygghtea vrrllgqlpi saqsysgspy ldlslfsydd kwvsvmerpk
      481 tcgdhpirfy ardsgllkfe iqagllgrpi nhtvrrlvaf tfhpfepfai svqrtnaeyv
      541 vnfhmrhcct
//
LOCUS       XP_061014646             496 aa            linear   MAM 02-DEC-2023
DEFINITION  DET1 homolog isoform X2 [Dama dama].
ACCESSION   XP_061014646
VERSION     XP_061014646.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158663.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..496
                     /product="DET1 homolog isoform X2"
                     /calculated_mol_wt=57269
     Region          142..487
                     /region_name="Det1"
                     /note="De-etiolated protein 1 Det1; pfam09737"
                     /db_xref="CDD:462868"
     CDS             1..496
                     /gene="DET1"
                     /coded_by="XM_061158663.1:141..1631"
                     /db_xref="GeneID:133067764"
ORIGIN      
        1 mdhhvstikp rriqnqnvih rlerrrissg kagthwhqvr vfhqnvfpnf tvvnvekppc
       61 flrkfspdgr yfiafssdqt sleiyeyqgc qaaedllqgy egeilangnd qrsvnirgrl
      121 ferffvllhi tnvaangehl nrecslftdd crcvivgsaa ylpdephppf yevyrnsesv
      181 tpnprspled yslhivdlht grlcdtrtfk cdkvvlshnq glylyknila ilsvqqqtih
      241 vfqvtpegtf idvrtigrfc yeddlltvsa vfpevqrdsq tgmanpfrdp finslkhrll
      301 vylwrraeqd gsamakrrff qyfdqlrqlr mwkmqllden hlfikytsed vvtlrvtdps
      361 qasffvvynm vtteviavfe ntsdellelf enfcdlfrna tlhsevqfpc sassnnfarq
      421 iqrrfkdtiv nakygghtea vrrllgqlpi saqsysgspy ldlslfsydd kwvsvmerpk
      481 tcgdhpislt mghves
//
LOCUS       XP_061014647             320 aa            linear   MAM 02-DEC-2023
DEFINITION  heterogeneous nuclear ribonucleoprotein A1-like [Dama dama].
ACCESSION   XP_061014647
VERSION     XP_061014647.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158664.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..320
                     /product="heterogeneous nuclear ribonucleoprotein A1-like"
                     /calculated_mol_wt=34012
     Region          12..92
                     /region_name="RRM1_hnRNPA1"
                     /note="RNA recognition motif 1 (RRM1) found in
                     heterogeneous nuclear ribonucleoprotein A1 (hnRNP A1) and
                     similar proteins; cd12761"
                     /db_xref="CDD:410154"
     Site            order(12,15,17,19..20,42,44,46,55..57,59,82,85,87..92)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410154"
     Region          105..184
                     /region_name="RRM2_hnRNPA3"
                     /note="RNA recognition motif 2 (RRM2) found in
                     heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3) and
                     similar proteins; cd12582"
                     /db_xref="CDD:409996"
     Region          255..292
                     /region_name="HnRNPA1"
                     /note="Nuclear factor hnRNPA1; pfam11627"
                     /db_xref="CDD:463312"
     CDS             1..320
                     /gene="LOC133067765"
                     /coded_by="XM_061158664.1:78..1040"
                     /db_xref="GeneID:133067765"
ORIGIN      
        1 msksespkep eqlrklfigg lsfettdesl rshfeqwgtl tdcvvmrdpn tkrsrgfgfv
       61 tyatveevda amnarphkvd grvvepkrav sredsqrpga hltvkkifvg gikedteehh
      121 lrdyfeqygk ievieimtdr gsgkkrgfaf vtfddhdsvd kiviqkyhtv nghncevrka
      181 lskqemasas ssqrgrsgsg nfgggrgggf ggndnfgrgg nfsgrggfgg srggggyggs
      241 gdgyngfgnd gsnfggggsy ndfgsynnqs snfgpmkggn fggrssgpyg gggqyfakar
      301 nqggyggsss sssygsgrrf
//
LOCUS       XP_061014648             327 aa            linear   MAM 02-DEC-2023
DEFINITION  apoptosis-enhancing nuclease [Dama dama].
ACCESSION   XP_061014648
VERSION     XP_061014648.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158665.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..327
                     /product="apoptosis-enhancing nuclease"
                     /calculated_mol_wt=35938
     Region          <5..>108
                     /region_name="PRK07003"
                     /note="DNA polymerase III subunit gamma/tau"
                     /db_xref="CDD:235906"
     Region          113..269
                     /region_name="DnaQ_like_exo"
                     /note="DnaQ-like (or DEDD) 3'-5' exonuclease domain
                     superfamily; cl10012"
                     /db_xref="CDD:447876"
     Site            order(116..119,195..196,198..200,260)
                     /site_type="active"
                     /db_xref="CDD:99852"
     Site            order(116,118,200,260)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:99852"
     Site            order(117..119,195..196,198..199,260)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:99852"
     CDS             1..327
                     /gene="AEN"
                     /coded_by="XM_061158665.1:233..1216"
                     /db_xref="GeneID:133067766"
ORIGIN      
        1 mgmvpqeape saqcpspsla spsakdvlrr khkrksrqhq rfmarkallq eqgllsprpe
       61 pgpsplpvlp gappgaeats sarqrpraes ggagcsrkpa prdsasplps kcvaidcemv
      121 gtgprgrvse larcsvvsyh gevlydkyvr pempivdyrt rwsgitrqhm rkaipfqvaq
      181 keilkllkgk vvvghalhnd fqalkyihpr gqtrdttsvp sllsqpglhv rnrvslkdla
      241 lqllhkkiqv gqhghssved avtamelyrl vevqweqqva sslrappedr epdsgtdmeq
      301 ymedqywped laqgtsggtg eapgrre
//
LOCUS       XP_061014649             327 aa            linear   MAM 02-DEC-2023
DEFINITION  apoptosis-enhancing nuclease [Dama dama].
ACCESSION   XP_061014649
VERSION     XP_061014649.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158666.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..327
                     /product="apoptosis-enhancing nuclease"
                     /calculated_mol_wt=35938
     Region          <5..>108
                     /region_name="PRK07003"
                     /note="DNA polymerase III subunit gamma/tau"
                     /db_xref="CDD:235906"
     Region          113..269
                     /region_name="DnaQ_like_exo"
                     /note="DnaQ-like (or DEDD) 3'-5' exonuclease domain
                     superfamily; cl10012"
                     /db_xref="CDD:447876"
     Site            order(116..119,195..196,198..200,260)
                     /site_type="active"
                     /db_xref="CDD:99852"
     Site            order(116,118,200,260)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:99852"
     Site            order(117..119,195..196,198..199,260)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:99852"
     CDS             1..327
                     /gene="AEN"
                     /coded_by="XM_061158666.1:125..1108"
                     /db_xref="GeneID:133067766"
ORIGIN      
        1 mgmvpqeape saqcpspsla spsakdvlrr khkrksrqhq rfmarkallq eqgllsprpe
       61 pgpsplpvlp gappgaeats sarqrpraes ggagcsrkpa prdsasplps kcvaidcemv
      121 gtgprgrvse larcsvvsyh gevlydkyvr pempivdyrt rwsgitrqhm rkaipfqvaq
      181 keilkllkgk vvvghalhnd fqalkyihpr gqtrdttsvp sllsqpglhv rnrvslkdla
      241 lqllhkkiqv gqhghssved avtamelyrl vevqweqqva sslrappedr epdsgtdmeq
      301 ymedqywped laqgtsggtg eapgrre
//
LOCUS       XP_061014650             327 aa            linear   MAM 02-DEC-2023
DEFINITION  apoptosis-enhancing nuclease [Dama dama].
ACCESSION   XP_061014650
VERSION     XP_061014650.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158667.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..327
                     /product="apoptosis-enhancing nuclease"
                     /calculated_mol_wt=35938
     Region          <5..>108
                     /region_name="PRK07003"
                     /note="DNA polymerase III subunit gamma/tau"
                     /db_xref="CDD:235906"
     Region          113..269
                     /region_name="DnaQ_like_exo"
                     /note="DnaQ-like (or DEDD) 3'-5' exonuclease domain
                     superfamily; cl10012"
                     /db_xref="CDD:447876"
     Site            order(116..119,195..196,198..200,260)
                     /site_type="active"
                     /db_xref="CDD:99852"
     Site            order(116,118,200,260)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:99852"
     Site            order(117..119,195..196,198..199,260)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:99852"
     CDS             1..327
                     /gene="AEN"
                     /coded_by="XM_061158667.1:313..1296"
                     /db_xref="GeneID:133067766"
ORIGIN      
        1 mgmvpqeape saqcpspsla spsakdvlrr khkrksrqhq rfmarkallq eqgllsprpe
       61 pgpsplpvlp gappgaeats sarqrpraes ggagcsrkpa prdsasplps kcvaidcemv
      121 gtgprgrvse larcsvvsyh gevlydkyvr pempivdyrt rwsgitrqhm rkaipfqvaq
      181 keilkllkgk vvvghalhnd fqalkyihpr gqtrdttsvp sllsqpglhv rnrvslkdla
      241 lqllhkkiqv gqhghssved avtamelyrl vevqweqqva sslrappedr epdsgtdmeq
      301 ymedqywped laqgtsggtg eapgrre
//
LOCUS       XP_061014651             171 aa            linear   MAM 02-DEC-2023
DEFINITION  interferon-stimulated gene 20 kDa protein [Dama dama].
ACCESSION   XP_061014651
VERSION     XP_061014651.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158668.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..171
                     /product="interferon-stimulated gene 20 kDa protein"
                     /calculated_mol_wt=19186
     Region          8..163
                     /region_name="DnaQ_like_exo"
                     /note="DnaQ-like (or DEDD) 3'-5' exonuclease domain
                     superfamily; cl10012"
                     /db_xref="CDD:447876"
     Site            order(11..14,89..90,92..94,154)
                     /site_type="active"
                     /db_xref="CDD:99852"
     Site            order(11,13,94,154)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:99852"
     Site            order(12..14,89..90,92..93,154)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:99852"
     CDS             1..171
                     /gene="ISG20"
                     /coded_by="XM_061158668.1:183..698"
                     /db_xref="GeneID:133067767"
ORIGIN      
        1 marsadvvam dcemvglgpf resglarcsl vdyhgsvlyd kfirpegdit dyrtpvsgit
       61 arnmegatpf avarleilqv lkgklvvghd lkhdfkalke nmsnyaiydt aadrllwrea
      121 glqycrrvsl rvlsqrllgr riqdsvlghn svedakaame lyrisrrird q
//
LOCUS       XP_061014652             309 aa            linear   MAM 02-DEC-2023
DEFINITION  myeloid-associated differentiation marker-like [Dama dama].
ACCESSION   XP_061014652
VERSION     XP_061014652.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158669.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..309
                     /product="myeloid-associated differentiation marker-like"
                     /calculated_mol_wt=35335
     Region          22..145
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     Region          161..303
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     CDS             1..309
                     /gene="LOC133067768"
                     /coded_by="XM_061158669.1:212..1141"
                     /db_xref="GeneID:133067768"
ORIGIN      
        1 mpdlhysmst waiiaykadv hslccflrfp qtismciafs lvasmgherg aigdwclaiw
       61 clcfivtffm smfeyryyyr nfpffwyklp ityacyaall clstsiiysv fyvqylphgp
      121 srdraiaasa fsciacvlya idvaytwkhy efknvpcyvh tlpgllkile sfvacvifaf
      181 lsntslylhq palewcvavy sicfvqvava mllrlggwen rlplplpifh lgltvlsvil
      241 yvsalvlwpl yqfdeklggq phwdsdmscv gelidygcvw dqrlavavlt ainlliyvad
      301 lvywtcrfl
//
LOCUS       XP_061014654             307 aa            linear   MAM 02-DEC-2023
DEFINITION  myeloid-associated differentiation marker-like [Dama dama].
ACCESSION   XP_061014654
VERSION     XP_061014654.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158671.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..307
                     /product="myeloid-associated differentiation marker-like"
                     /calculated_mol_wt=34359
     Region          24..133
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     Region          151..291
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     CDS             1..307
                     /gene="LOC133067771"
                     /coded_by="XM_061158671.1:321..1244"
                     /db_xref="GeneID:133067771"
ORIGIN      
        1 mstrstspek walcvvrccl hlpqlfstcv afslvtdmgi gkgaignwsl clwgfcftvt
       61 litsitelck vqscfpffwn nfpvtyacya alvclsvsii ysvtyiqflp ygphrdraia
      121 atafsciasv lyamevactw ngykimnttc yvltmpgllk vletfmagvi faflsntsly
      181 lhqpalewcv avysicfila avttllnlve wehrlpveav itmlsvllyi salvlwplyq
      241 fneefggqpq rssdwdcrde ltydmctwdq rlavailtai nllayvadlg ywarqvsvgt
      301 edqsrds
//
LOCUS       XP_061014655             139 aa            linear   MAM 02-DEC-2023
DEFINITION  myeloid-associated differentiation marker-like [Dama dama].
ACCESSION   XP_061014655
VERSION     XP_061014655.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158672.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..139
                     /product="myeloid-associated differentiation marker-like"
                     /calculated_mol_wt=15564
     CDS             1..139
                     /gene="LOC133067772"
                     /coded_by="XM_061158672.1:82..501"
                     /db_xref="GeneID:133067772"
ORIGIN      
        1 mqgvlkvles fvacvifafi sntsrhpkep ahewclaiyy icftqaivat llnlgnweyr
       61 lpiqvvltll svllystalv lwslypvnee ieikpegfwy lyilglthcs slgdhrlava
      121 iltainlliy vadlvisah
//
LOCUS       XP_061014656            2570 aa            linear   MAM 02-DEC-2023
DEFINITION  aggrecan core protein isoform X1 [Dama dama].
ACCESSION   XP_061014656
VERSION     XP_061014656.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158673.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2570
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2570
                     /product="aggrecan core protein isoform X1"
                     /calculated_mol_wt=266788
     Region          33..155
                     /region_name="Ig_Aggrecan"
                     /note="Immunoglobulin (Ig)-like domain of the chondroitin
                     sulfate proteoglycan core protein (CSPG), aggrecan;
                     cd05900"
                     /db_xref="CDD:409481"
     Region          33..36
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409481"
     Region          39..41
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409481"
     Region          45..53
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409481"
     Region          72..78
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409481"
     Region          83..86
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409481"
     Region          104..109
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409481"
     Region          115..121
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409481"
     Region          129..136
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409481"
     Region          146..155
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409481"
     Region          153..247
                     /region_name="Link_domain_CSPGs_modules_1_3"
                     /note="this extracellular link domain is found in the
                     first and third link modules of the chondroitin sulfate
                     proteoglycan core protein (CSPG) aggrecan. In addition, it
                     is found in the first link module of three other CSPGs:
                     versican, neurocan, and brevican; cd03517"
                     /db_xref="CDD:239594"
     Site            163..164
                     /site_type="other"
                     /note="putative hyaluronan binding site [chemical
                     binding]"
                     /db_xref="CDD:239594"
     Region          254..349
                     /region_name="Link_domain_CSPGs_modules_2_4"
                     /note="this link domain is found in the second and fourth
                     link modules of the chondroitin sulfate proteoglycan core
                     protein (CSPG) aggrecan and, in the second link module of
                     three other CSPGs: versican, neurocan, and brevican. The
                     link domain is a hyaluronan...; cd03520"
                     /db_xref="CDD:239597"
     Site            261..262
                     /site_type="other"
                     /note="putative hyaluronan binding site [chemical
                     binding]"
                     /db_xref="CDD:239597"
     Region          487..581
                     /region_name="Link_domain_CSPGs_modules_1_3"
                     /note="this extracellular link domain is found in the
                     first and third link modules of the chondroitin sulfate
                     proteoglycan core protein (CSPG) aggrecan. In addition, it
                     is found in the first link module of three other CSPGs:
                     versican, neurocan, and brevican; cd03517"
                     /db_xref="CDD:239594"
     Site            497..498
                     /site_type="other"
                     /note="putative hyaluronan binding site [chemical
                     binding]"
                     /db_xref="CDD:239594"
     Region          588..683
                     /region_name="Link_domain_CSPGs_modules_2_4"
                     /note="this link domain is found in the second and fourth
                     link modules of the chondroitin sulfate proteoglycan core
                     protein (CSPG) aggrecan and, in the second link module of
                     three other CSPGs: versican, neurocan, and brevican. The
                     link domain is a hyaluronan...; cd03520"
                     /db_xref="CDD:239597"
     Site            595..596
                     /site_type="other"
                     /note="putative hyaluronan binding site [chemical
                     binding]"
                     /db_xref="CDD:239597"
     Region          689..>1051
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          1275..>1537
                     /region_name="PRK15387"
                     /note="type III secretion system effector E3 ubiquitin
                     transferase SspH2"
                     /db_xref="CDD:185285"
     Region          1583..>2058
                     /region_name="COG4625"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal beta-barrel porin domain [Function unknown]"
                     /db_xref="CDD:443664"
     Region          <1898..2316
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          2318..2354
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(2318,2321,2335)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          2360..2483
                     /region_name="CLECT_CSPGs"
                     /note="C-type lectin-like domain (CTLD) of the type found
                     in chondroitin sulfate proteoglycan core proteins;
                     cd03588"
                     /db_xref="CDD:153058"
     Site            order(2378,2410..2413,2442,2452,2460,2462,2468,2471,
                     2473..2475)
                     /site_type="active"
                     /note="fibronectin type III repeats 3-5 binding site
                     [active]"
                     /db_xref="CDD:153058"
     Site            order(2421,2425,2448,2454..2455)
                     /site_type="other"
                     /note="calcium binding site 1 [ion binding]"
                     /db_xref="CDD:153058"
     Site            order(2425,2455)
                     /site_type="other"
                     /note="calcium binding site 3 [ion binding]"
                     /db_xref="CDD:153058"
     Site            order(2445,2447,2454,2468..2469)
                     /site_type="other"
                     /note="carbohydrate binding site"
                     /db_xref="CDD:153058"
     Region          2487..2543
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(2497,2517)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     CDS             1..2570
                     /gene="ACAN"
                     /coded_by="XM_061158673.1:328..8040"
                     /db_xref="GeneID:133067773"
ORIGIN      
        1 mttlllvfvt lrviaaaisv evsepdnsls vsipepsplr vllgssltip cyfidpmhpv
       61 ttapstapla prikwsrisk ekevvllvat egrvrvnsay qdkvtlpnyp aipsdatlei
      121 qnlrsndsgi yrcevmhgie dsqatlevvv kgivfhyrai strytldfdr aqraclqnsa
      181 iiatpeqlqa ayedgfhqcd agwladqtvr ypihtpregc ygdkdefpgv rtygirdtne
      241 tydvycfaee megevfyats pekftfqeaa necrrlgarl attgqlylaw qggmdmcsag
      301 wladrsvryp iskarpncgg nllgvrtvyl hanqtgypdp ssrydaicyt gedfvdipen
      361 ffgvggeedi tiqtvtwpdv elplprnite geargnvilt akpdfevspt apepeepftf
      421 vpevratafp tvenrtgeat rpwafpgest pgleaptaft sedlvvqvtl apgaaevpgq
      481 prlpggvvfh yrpgssrysl tfeeakqacl rtgaviaspe qlqaayeagy eqcdagwlqd
      541 qtvrypivsp rtpcvgdkds spgvrtygvr ppsetydvyc yvdrlegevf fatrleqftf
      601 reaqefcesq natlattgql yaawsrgldk cyagwlsdgs lrypivtprp acggdkpgvr
      661 tvylypnqtg lldplsrhha fcfrgvsvap spgeeegstp tagpdvedwi vtqvgpgvaa
      721 vpvgeettat pgfttepenk teweltytpa gtfplpgipp twpptgaate ehtegpsate
      781 vpsasekpfp seepfppeep fpsekpfppe elfpsekpfp sekpfpsekp fpseepfppe
      841 epfpsekpfp peelfpsekp fpseepfpse kpfppeepfp sekpipseep fpsekpfpse
      901 epfpseepst lsapvpsrte lpssgeasgv pevsgdftgs geisghldfs gqpsgesasg
      961 lpsedldssg ltstvgsglp vesglpsgee eritwtsapk vdrlpsggeg pevsasgved
     1021 isglpsggev hleisasgve disglpsgge vhleisasgv edisglpsgg evhleisasg
     1081 vedlsklpsg egpeisasgv edlsglpsge eghleisasg vedlsvipsg egpevsasgv
     1141 edlsrlpsge gpevsasgve dlsglpsgeg pevsvsgved lsglpsgegp evsvsgvedl
     1201 sglpsgegpe vsvsgvedls glpsgegpev svsgvedlsg lpsgegpevs vsgvedlsgl
     1261 psgegpevsa sgvedlsrlp sgegpevsas gvedisrlps gegpevsasg vedisrlpsg
     1321 egpevsasgv edlsvlpsge ghleisasgv edlsrppsge gpevsasgve dlgvlpsgeg
     1381 hletsasgve dlsrlpsgeg hleistsgve dlsrlpsgeg hleisasgee dlsrvpsgeg
     1441 pevsasgved lgvppsgdgh letstsgved lgvlpsgegh letstsgved lsrlpsgegh
     1501 letstseved lsrlpsgegh letstsgved lsrlpsgegp evsasgvedl gvlpsgeghl
     1561 eisasgvedl srlpsrgedh letsasgvgd lsglpsgreg leisasgagd lsglisgked
     1621 ltesasgdld lgripsvtlg sgqapeasgl psgfsgeysg vdlgsgpssg lpdfsglpsg
     1681 fptvslvdtt lvevvtatta gelegrgtid isgagetsgl pfseldisgg asglssgael
     1741 sgqasgsldi sgetsglfgv sgqpsgfpdi sgetsgilei sgqpsgfsge isgmtelsgl
     1801 psgqpeisge asgilsglgp pfgitdlsge apgipdlsgq psglpefsgt tsgipdlvss
     1861 amsgsgessg itfvdtslve vtpttfkeee glgsvelsgl psgeadlsgt sglvdvsgls
     1921 sgaidssgft sqppefsglp sgvtevsgea sraesgsslp sgaydssglp sgfptvsfvd
     1981 rtlvesvtqa ptaqeagegp sgilelsgap sgapdmsgdh lgsldqsglq sglvepsgep
     2041 astpyfsgdf sgttdvsges saatstsgea sglpevtlit selvedvtep tvsqelgqrp
     2101 pitytpqlfe tsgeasasgd vprfpgsgie assvpessge msaypeaevg asaapeasgg
     2161 asgspdvset tstfheadle gtsglgasgs psafpqgptg glatpevsge stttfdvsve
     2221 asgspsttpl asgdktdtsg dlsghtsgld ivisttipes ewtqqtqrpa earleiesss
     2281 pvhsgeesqt adtatsptda siptsaggtd dseatttdid eclsspclng atcvdaidsf
     2341 tclclpsyqg dvceidqklc eegwtkfqgh cyrhfpdrat wvdaesqcrk qqshlssivt
     2401 peeqefvnnn aqdyqwigln dktiegdfrw sdghslqfen wrpnqpdnff atgedcvvmi
     2461 whekgewndv pcnyqlpftc kkgtvacgep pvveharifg qkkdryeina lvryqctegf
     2521 iqrhvptirc qpsghweepr itctdpatyk rrlqkrssrt lrrsrpstah
//
LOCUS       XP_061014657            2532 aa            linear   MAM 02-DEC-2023
DEFINITION  aggrecan core protein isoform X2 [Dama dama].
ACCESSION   XP_061014657
VERSION     XP_061014657.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158674.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2532
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2532
                     /product="aggrecan core protein isoform X2"
                     /calculated_mol_wt=262791
     Region          33..155
                     /region_name="Ig_Aggrecan"
                     /note="Immunoglobulin (Ig)-like domain of the chondroitin
                     sulfate proteoglycan core protein (CSPG), aggrecan;
                     cd05900"
                     /db_xref="CDD:409481"
     Region          33..36
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409481"
     Region          39..41
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409481"
     Region          45..53
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409481"
     Region          72..78
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409481"
     Region          83..86
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409481"
     Region          104..109
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409481"
     Region          115..121
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409481"
     Region          129..136
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409481"
     Region          146..155
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409481"
     Region          153..247
                     /region_name="Link_domain_CSPGs_modules_1_3"
                     /note="this extracellular link domain is found in the
                     first and third link modules of the chondroitin sulfate
                     proteoglycan core protein (CSPG) aggrecan. In addition, it
                     is found in the first link module of three other CSPGs:
                     versican, neurocan, and brevican; cd03517"
                     /db_xref="CDD:239594"
     Site            163..164
                     /site_type="other"
                     /note="putative hyaluronan binding site [chemical
                     binding]"
                     /db_xref="CDD:239594"
     Region          254..349
                     /region_name="Link_domain_CSPGs_modules_2_4"
                     /note="this link domain is found in the second and fourth
                     link modules of the chondroitin sulfate proteoglycan core
                     protein (CSPG) aggrecan and, in the second link module of
                     three other CSPGs: versican, neurocan, and brevican. The
                     link domain is a hyaluronan...; cd03520"
                     /db_xref="CDD:239597"
     Site            261..262
                     /site_type="other"
                     /note="putative hyaluronan binding site [chemical
                     binding]"
                     /db_xref="CDD:239597"
     Region          487..581
                     /region_name="Link_domain_CSPGs_modules_1_3"
                     /note="this extracellular link domain is found in the
                     first and third link modules of the chondroitin sulfate
                     proteoglycan core protein (CSPG) aggrecan. In addition, it
                     is found in the first link module of three other CSPGs:
                     versican, neurocan, and brevican; cd03517"
                     /db_xref="CDD:239594"
     Site            497..498
                     /site_type="other"
                     /note="putative hyaluronan binding site [chemical
                     binding]"
                     /db_xref="CDD:239594"
     Region          588..683
                     /region_name="Link_domain_CSPGs_modules_2_4"
                     /note="this link domain is found in the second and fourth
                     link modules of the chondroitin sulfate proteoglycan core
                     protein (CSPG) aggrecan and, in the second link module of
                     three other CSPGs: versican, neurocan, and brevican. The
                     link domain is a hyaluronan...; cd03520"
                     /db_xref="CDD:239597"
     Site            595..596
                     /site_type="other"
                     /note="putative hyaluronan binding site [chemical
                     binding]"
                     /db_xref="CDD:239597"
     Region          689..>1051
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          1275..>1537
                     /region_name="PRK15387"
                     /note="type III secretion system effector E3 ubiquitin
                     transferase SspH2"
                     /db_xref="CDD:185285"
     Region          1583..>2058
                     /region_name="COG4625"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal beta-barrel porin domain [Function unknown]"
                     /db_xref="CDD:443664"
     Region          <1898..2316
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          2322..2445
                     /region_name="CLECT_CSPGs"
                     /note="C-type lectin-like domain (CTLD) of the type found
                     in chondroitin sulfate proteoglycan core proteins;
                     cd03588"
                     /db_xref="CDD:153058"
     Site            order(2340,2372..2375,2404,2414,2422,2424,2430,2433,
                     2435..2437)
                     /site_type="active"
                     /note="fibronectin type III repeats 3-5 binding site
                     [active]"
                     /db_xref="CDD:153058"
     Site            order(2383,2387,2410,2416..2417)
                     /site_type="other"
                     /note="calcium binding site 1 [ion binding]"
                     /db_xref="CDD:153058"
     Site            order(2387,2417)
                     /site_type="other"
                     /note="calcium binding site 3 [ion binding]"
                     /db_xref="CDD:153058"
     Site            order(2407,2409,2416,2430..2431)
                     /site_type="other"
                     /note="carbohydrate binding site"
                     /db_xref="CDD:153058"
     Region          2449..2505
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(2459,2479)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     CDS             1..2532
                     /gene="ACAN"
                     /coded_by="XM_061158674.1:328..7926"
                     /db_xref="GeneID:133067773"
ORIGIN      
        1 mttlllvfvt lrviaaaisv evsepdnsls vsipepsplr vllgssltip cyfidpmhpv
       61 ttapstapla prikwsrisk ekevvllvat egrvrvnsay qdkvtlpnyp aipsdatlei
      121 qnlrsndsgi yrcevmhgie dsqatlevvv kgivfhyrai strytldfdr aqraclqnsa
      181 iiatpeqlqa ayedgfhqcd agwladqtvr ypihtpregc ygdkdefpgv rtygirdtne
      241 tydvycfaee megevfyats pekftfqeaa necrrlgarl attgqlylaw qggmdmcsag
      301 wladrsvryp iskarpncgg nllgvrtvyl hanqtgypdp ssrydaicyt gedfvdipen
      361 ffgvggeedi tiqtvtwpdv elplprnite geargnvilt akpdfevspt apepeepftf
      421 vpevratafp tvenrtgeat rpwafpgest pgleaptaft sedlvvqvtl apgaaevpgq
      481 prlpggvvfh yrpgssrysl tfeeakqacl rtgaviaspe qlqaayeagy eqcdagwlqd
      541 qtvrypivsp rtpcvgdkds spgvrtygvr ppsetydvyc yvdrlegevf fatrleqftf
      601 reaqefcesq natlattgql yaawsrgldk cyagwlsdgs lrypivtprp acggdkpgvr
      661 tvylypnqtg lldplsrhha fcfrgvsvap spgeeegstp tagpdvedwi vtqvgpgvaa
      721 vpvgeettat pgfttepenk teweltytpa gtfplpgipp twpptgaate ehtegpsate
      781 vpsasekpfp seepfppeep fpsekpfppe elfpsekpfp sekpfpsekp fpseepfppe
      841 epfpsekpfp peelfpsekp fpseepfpse kpfppeepfp sekpipseep fpsekpfpse
      901 epfpseepst lsapvpsrte lpssgeasgv pevsgdftgs geisghldfs gqpsgesasg
      961 lpsedldssg ltstvgsglp vesglpsgee eritwtsapk vdrlpsggeg pevsasgved
     1021 isglpsggev hleisasgve disglpsgge vhleisasgv edisglpsgg evhleisasg
     1081 vedlsklpsg egpeisasgv edlsglpsge eghleisasg vedlsvipsg egpevsasgv
     1141 edlsrlpsge gpevsasgve dlsglpsgeg pevsvsgved lsglpsgegp evsvsgvedl
     1201 sglpsgegpe vsvsgvedls glpsgegpev svsgvedlsg lpsgegpevs vsgvedlsgl
     1261 psgegpevsa sgvedlsrlp sgegpevsas gvedisrlps gegpevsasg vedisrlpsg
     1321 egpevsasgv edlsvlpsge ghleisasgv edlsrppsge gpevsasgve dlgvlpsgeg
     1381 hletsasgve dlsrlpsgeg hleistsgve dlsrlpsgeg hleisasgee dlsrvpsgeg
     1441 pevsasgved lgvppsgdgh letstsgved lgvlpsgegh letstsgved lsrlpsgegh
     1501 letstseved lsrlpsgegh letstsgved lsrlpsgegp evsasgvedl gvlpsgeghl
     1561 eisasgvedl srlpsrgedh letsasgvgd lsglpsgreg leisasgagd lsglisgked
     1621 ltesasgdld lgripsvtlg sgqapeasgl psgfsgeysg vdlgsgpssg lpdfsglpsg
     1681 fptvslvdtt lvevvtatta gelegrgtid isgagetsgl pfseldisgg asglssgael
     1741 sgqasgsldi sgetsglfgv sgqpsgfpdi sgetsgilei sgqpsgfsge isgmtelsgl
     1801 psgqpeisge asgilsglgp pfgitdlsge apgipdlsgq psglpefsgt tsgipdlvss
     1861 amsgsgessg itfvdtslve vtpttfkeee glgsvelsgl psgeadlsgt sglvdvsgls
     1921 sgaidssgft sqppefsglp sgvtevsgea sraesgsslp sgaydssglp sgfptvsfvd
     1981 rtlvesvtqa ptaqeagegp sgilelsgap sgapdmsgdh lgsldqsglq sglvepsgep
     2041 astpyfsgdf sgttdvsges saatstsgea sglpevtlit selvedvtep tvsqelgqrp
     2101 pitytpqlfe tsgeasasgd vprfpgsgie assvpessge msaypeaevg asaapeasgg
     2161 asgspdvset tstfheadle gtsglgasgs psafpqgptg glatpevsge stttfdvsve
     2221 asgspsttpl asgdktdtsg dlsghtsgld ivisttipes ewtqqtqrpa earleiesss
     2281 pvhsgeesqt adtatsptda siptsaggtd dseatttdqk lceegwtkfq ghcyrhfpdr
     2341 atwvdaesqc rkqqshlssi vtpeeqefvn nnaqdyqwig lndktiegdf rwsdghslqf
     2401 enwrpnqpdn ffatgedcvv miwhekgewn dvpcnyqlpf tckkgtvacg eppvvehari
     2461 fgqkkdryei nalvryqcte gfiqrhvpti rcqpsghwee pritctdpat ykrrlqkrss
     2521 rtlrrsrpst ah
//
LOCUS       XP_061014658             436 aa            linear   MAM 02-DEC-2023
DEFINITION  lactadherin isoform X1 [Dama dama].
ACCESSION   XP_061014658
VERSION     XP_061014658.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158675.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..436
                     /product="lactadherin isoform X1"
                     /calculated_mol_wt=48269
     Region          26..62
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          70..106
                     /region_name="EGF"
                     /note="EGF-like domain; pfam00008"
                     /db_xref="CDD:394967"
     Region          115..273
                     /region_name="FA58C"
                     /note="Coagulation factor 5/8 C-terminal domain, discoidin
                     domain; Cell surface-attached carbohydrate-binding domain,
                     present in eukaryotes and assumed to have horizontally
                     transferred to eubacterial genomes; cd00057"
                     /db_xref="CDD:238014"
     Site            order(161,189,196)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:238014"
     Region          281..435
                     /region_name="FA58C"
                     /note="Coagulation factor 5/8 C-terminal domain, discoidin
                     domain; Cell surface-attached carbohydrate-binding domain,
                     present in eukaryotes and assumed to have horizontally
                     transferred to eubacterial genomes; cd00057"
                     /db_xref="CDD:238014"
     Site            order(328,356,363)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:238014"
     CDS             1..436
                     /gene="MFGE8"
                     /coded_by="XM_061158675.1:93..1403"
                     /db_xref="GeneID:133067774"
ORIGIN      
        1 mpcprllaal cgalfcasgl fafsgdfcds sqclnggtcl lnedrnpsfy clcpkgfmgl
       61 lcnetehgpc spnpchndae cqeidhglrg dvfteyickc pvgfrgthce ssctsplgmq
      121 tgaiansqis assmhlgfmg lqrwapelar lhhtgivnaw tssnydrnpw iqvnlmrkmr
      181 vtgvvtqgas ragsaeylkt fkvaystdgr rfkfiqvagr sgegqsgdki fmgnvnnsgl
      241 kinmfdtple vqyvrlvpii chrgctlrfe llgcewngca eplglkdnti pnkqitassy
      301 yktwglsafs wfpyyarldn qgkfnawtaq tnsasewlqi dlgsqkrvtg iitqgardfg
      361 hiqyvaaykv aygddgvtwt eykdpgakes kifpgnmdnn shkknmfema fqarfvriqp
      421 vawhnritlr vellgc
//
LOCUS       XP_061014659             393 aa            linear   MAM 02-DEC-2023
DEFINITION  lactadherin isoform X2 [Dama dama].
ACCESSION   XP_061014659
VERSION     XP_061014659.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158676.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..393
                     /product="lactadherin isoform X2"
                     /calculated_mol_wt=43554
     Region          27..63
                     /region_name="EGF"
                     /note="EGF-like domain; pfam00008"
                     /db_xref="CDD:394967"
     Region          72..230
                     /region_name="FA58C"
                     /note="Coagulation factor 5/8 C-terminal domain, discoidin
                     domain; Cell surface-attached carbohydrate-binding domain,
                     present in eukaryotes and assumed to have horizontally
                     transferred to eubacterial genomes; cd00057"
                     /db_xref="CDD:238014"
     Site            order(118,146,153)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:238014"
     Region          238..392
                     /region_name="FA58C"
                     /note="Coagulation factor 5/8 C-terminal domain, discoidin
                     domain; Cell surface-attached carbohydrate-binding domain,
                     present in eukaryotes and assumed to have horizontally
                     transferred to eubacterial genomes; cd00057"
                     /db_xref="CDD:238014"
     Site            order(285,313,320)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:238014"
     CDS             1..393
                     /gene="MFGE8"
                     /coded_by="XM_061158676.1:94..1275"
                     /db_xref="GeneID:133067774"
ORIGIN      
        1 mpcprllaal cgalfcasgl fafsgpcspn pchndaecqe idhglrgdvf teyickcpvg
       61 frgthcessc tsplgmqtga iansqisass mhlgfmglqr wapelarlhh tgivnawtss
      121 nydrnpwiqv nlmrkmrvtg vvtqgasrag saeylktfkv aystdgrrfk fiqvagrsge
      181 gqsgdkifmg nvnnsglkin mfdtplevqy vrlvpiichr gctlrfellg cewngcaepl
      241 glkdntipnk qitassyykt wglsafswfp yyarldnqgk fnawtaqtns asewlqidlg
      301 sqkrvtgiit qgardfghiq yvaaykvayg ddgvtwteyk dpgakeskif pgnmdnnshk
      361 knmfemafqa rfvriqpvaw hnritlrvel lgc
//
LOCUS       XP_061014660             425 aa            linear   MAM 02-DEC-2023
DEFINITION  monoacylglycerol lipase ABHD2 [Dama dama].
ACCESSION   XP_061014660
VERSION     XP_061014660.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158677.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..425
                     /product="monoacylglycerol lipase ABHD2"
                     /calculated_mol_wt=48151
     Region          61..404
                     /region_name="YheT"
                     /note="Predicted hydrolase of the alpha/beta-hydrolase
                     fold [General function prediction only]; COG0429"
                     /db_xref="CDD:440198"
     CDS             1..425
                     /gene="ABHD2"
                     /coded_by="XM_061158677.1:250..1527"
                     /db_xref="GeneID:133067775"
ORIGIN      
        1 mnammetsel pavfdgvkla avaavlyviv rclnlkspta ppdlyfqdsg lsrfllkscp
       61 lltkeyippl iwgksghiqt alygkmgrvr sphpyghrkf itmsdgatst fdlfeplaeh
      121 cvgdditmvi cpgianhsek qyirtfvdya qkngyrcavl nhlgalpnie ltsprmftyg
      181 ctwefgamvn yikktypltq lvvvgfslgg nivckylget qanqekvlcc vsvcqgysal
      241 raqetfmqwd qcrrfynflm adnmkkiils hrqalfgdhv kkpqsledtd lsrlytatsl
      301 mqiddnvmrk fhgynslkey yeeescmryl hriyvplmlv naaddplvhe slltipksls
      361 ekrenvmfvl plhgghlgff egsvlfpepl twmdklvvey anaicqwern ksqcsdtelv
      421 eadle
//
LOCUS       XP_061014661            1328 aa            linear   MAM 02-DEC-2023
DEFINITION  Fanconi anemia group I protein isoform X1 [Dama dama].
ACCESSION   XP_061014661
VERSION     XP_061014661.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158678.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1328
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1328
                     /product="Fanconi anemia group I protein isoform X1"
                     /calculated_mol_wt=149250
     Region          1..53
                     /region_name="FANCI_S1-cap"
                     /note="FANCI solenoid 1 cap; pfam14674"
                     /db_xref="CDD:434117"
     Region          43..1284
                     /region_name="FANCI"
                     /note="Fanconi anemia I protein; cd11720"
                     /db_xref="CDD:212594"
     Site            order(48,52,83..84,87,90..91,94..95,98,128,131,182..183,
                     215,219,273,277,280,376,442,446,449,480,483,486..487,490,
                     522..523,526,581..582,585..586,589..590,592..593,616,
                     618..622,625,628,678,682)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:212594"
     Site            order(287,291,294,331,336,339,974,1020,1072,1088,1101,
                     1158,1162,1172,1256,1263..1264)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212594"
     CDS             1..1328
                     /gene="FANCI"
                     /coded_by="XM_061158678.1:136..4122"
                     /db_xref="GeneID:133067778"
ORIGIN      
        1 mdqkilslaa ektadglqef lqtlkeddlt nllqnqavkg ktagallkai fkglpcseea
       61 galkrlkiys cciqllesgd lqkevaseii gllmlevhrf pgqllvelan efvgainegk
      121 ltngkslell piiltalgtk kenltygkge lsgedckkql intlcsgrwd hqyviqltsm
      181 fkavpltaee vefvvekvlk vfsklnlqei pplvyqllvl sskgsrkrvl agiiaffnkl
      241 dqqhseeqsg deyldlvtvp ldelrhvegt iilhivfaik ldfelgrell rhlkaaqqgd
      301 fssiicpfsi alllsvtrvq rfeeqvfdfl kssviksfkd vqllegakym qslfphgcci
      361 stmilevvnn svhswdhvtq glvefgfilm dsygpkkild gktaetssgl srmpnqhack
      421 lganilletf kihemirqei leqvlnrvvt rasspishfl dllsdiikys plvlqscssk
      481 vietfdylsf lpvqtvqgll kavqpllkvs msirdslilv lrkamfasql darksavagf
      541 llllknfkvl gslsssqcsq sigvsqvhvd ihsryssvan etfcleimds lkrclgqqad
      601 vrlmlyegfy dvlrrnsqla nsvmqtllsq lkqfyepepd vlpplkleac iltqgdqvsl
      661 qepldyllcc iqhclawyks rvvplqqeee eeegfyqhld dmlesithrm ikseledfel
      721 dksadfsqst gigiknnica slvmgicevl ieynffisnf sktkfetils lfmcykklsd
      781 ilneksgkgk tkmanrttds flsmkfvsdl ltalfrdstq sheeslsvlr ssnefmryav
      841 nvalqkvqql ketghvsgpd gqnpekvfqs lcditrvllw rytsiptsve elgkkekgkn
      901 isllcleglq kilsavqqfy qpkchqflka ldatdkeeee eevsvsqraa fqirqfqrsl
      961 lnllssqeed fksrealllv tvltslskll kpisaefvqm lswtskicke nswedasfsk
     1021 gmlsllfslh vsckspvsll rdlsqdihgh lgdldedvev ektnhfalvn lktaapavcl
     1081 lvlskaekvl eevdwlitkl kgqanqkiip eeassqaait nrpmekvtii qlgtlltffh
     1141 elvqtalpsg scvdtllkdl ckmyttltal vkyylqvyqr stgipknmek lvklsgshlt
     1201 plcysfisyv qnkhsrslkc tgekektaag ptamaralre tkpipnlifa ieqyekflih
     1261 lskrskvnlm khiklstsrd fkikgnildv vlrqeeeden eegtaseheg qnkepakkkr
     1321 kketkcls
//
LOCUS       XP_061014662            1328 aa            linear   MAM 02-DEC-2023
DEFINITION  Fanconi anemia group I protein isoform X1 [Dama dama].
ACCESSION   XP_061014662
VERSION     XP_061014662.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158679.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1328
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1328
                     /product="Fanconi anemia group I protein isoform X1"
                     /calculated_mol_wt=149250
     Region          1..53
                     /region_name="FANCI_S1-cap"
                     /note="FANCI solenoid 1 cap; pfam14674"
                     /db_xref="CDD:434117"
     Region          43..1284
                     /region_name="FANCI"
                     /note="Fanconi anemia I protein; cd11720"
                     /db_xref="CDD:212594"
     Site            order(48,52,83..84,87,90..91,94..95,98,128,131,182..183,
                     215,219,273,277,280,376,442,446,449,480,483,486..487,490,
                     522..523,526,581..582,585..586,589..590,592..593,616,
                     618..622,625,628,678,682)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:212594"
     Site            order(287,291,294,331,336,339,974,1020,1072,1088,1101,
                     1158,1162,1172,1256,1263..1264)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212594"
     CDS             1..1328
                     /gene="FANCI"
                     /coded_by="XM_061158679.1:152..4138"
                     /db_xref="GeneID:133067778"
ORIGIN      
        1 mdqkilslaa ektadglqef lqtlkeddlt nllqnqavkg ktagallkai fkglpcseea
       61 galkrlkiys cciqllesgd lqkevaseii gllmlevhrf pgqllvelan efvgainegk
      121 ltngkslell piiltalgtk kenltygkge lsgedckkql intlcsgrwd hqyviqltsm
      181 fkavpltaee vefvvekvlk vfsklnlqei pplvyqllvl sskgsrkrvl agiiaffnkl
      241 dqqhseeqsg deyldlvtvp ldelrhvegt iilhivfaik ldfelgrell rhlkaaqqgd
      301 fssiicpfsi alllsvtrvq rfeeqvfdfl kssviksfkd vqllegakym qslfphgcci
      361 stmilevvnn svhswdhvtq glvefgfilm dsygpkkild gktaetssgl srmpnqhack
      421 lganilletf kihemirqei leqvlnrvvt rasspishfl dllsdiikys plvlqscssk
      481 vietfdylsf lpvqtvqgll kavqpllkvs msirdslilv lrkamfasql darksavagf
      541 llllknfkvl gslsssqcsq sigvsqvhvd ihsryssvan etfcleimds lkrclgqqad
      601 vrlmlyegfy dvlrrnsqla nsvmqtllsq lkqfyepepd vlpplkleac iltqgdqvsl
      661 qepldyllcc iqhclawyks rvvplqqeee eeegfyqhld dmlesithrm ikseledfel
      721 dksadfsqst gigiknnica slvmgicevl ieynffisnf sktkfetils lfmcykklsd
      781 ilneksgkgk tkmanrttds flsmkfvsdl ltalfrdstq sheeslsvlr ssnefmryav
      841 nvalqkvqql ketghvsgpd gqnpekvfqs lcditrvllw rytsiptsve elgkkekgkn
      901 isllcleglq kilsavqqfy qpkchqflka ldatdkeeee eevsvsqraa fqirqfqrsl
      961 lnllssqeed fksrealllv tvltslskll kpisaefvqm lswtskicke nswedasfsk
     1021 gmlsllfslh vsckspvsll rdlsqdihgh lgdldedvev ektnhfalvn lktaapavcl
     1081 lvlskaekvl eevdwlitkl kgqanqkiip eeassqaait nrpmekvtii qlgtlltffh
     1141 elvqtalpsg scvdtllkdl ckmyttltal vkyylqvyqr stgipknmek lvklsgshlt
     1201 plcysfisyv qnkhsrslkc tgekektaag ptamaralre tkpipnlifa ieqyekflih
     1261 lskrskvnlm khiklstsrd fkikgnildv vlrqeeeden eegtaseheg qnkepakkkr
     1321 kketkcls
//
LOCUS       XP_061014663            1327 aa            linear   MAM 02-DEC-2023
DEFINITION  Fanconi anemia group I protein isoform X2 [Dama dama].
ACCESSION   XP_061014663
VERSION     XP_061014663.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158680.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1327
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1327
                     /product="Fanconi anemia group I protein isoform X2"
                     /calculated_mol_wt=149121
     Region          1..53
                     /region_name="FANCI_S1-cap"
                     /note="FANCI solenoid 1 cap; pfam14674"
                     /db_xref="CDD:434117"
     Region          43..1283
                     /region_name="FANCI"
                     /note="Fanconi anemia I protein; cd11720"
                     /db_xref="CDD:212594"
     Site            order(48,52,83..84,87,90..91,94..95,98,128,131,182..183,
                     215,219,273,277,280,376,442,446,449,480,483,486..487,490,
                     522..523,526,581..582,585..586,589..590,592..593,616,
                     618..622,625,628,678,682)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:212594"
     Site            order(287,291,294,331,336,339,974,1020,1072,1088,1101,
                     1157,1161,1171,1255,1262..1263)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212594"
     CDS             1..1327
                     /gene="FANCI"
                     /coded_by="XM_061158680.1:136..4119"
                     /db_xref="GeneID:133067778"
ORIGIN      
        1 mdqkilslaa ektadglqef lqtlkeddlt nllqnqavkg ktagallkai fkglpcseea
       61 galkrlkiys cciqllesgd lqkevaseii gllmlevhrf pgqllvelan efvgainegk
      121 ltngkslell piiltalgtk kenltygkge lsgedckkql intlcsgrwd hqyviqltsm
      181 fkavpltaee vefvvekvlk vfsklnlqei pplvyqllvl sskgsrkrvl agiiaffnkl
      241 dqqhseeqsg deyldlvtvp ldelrhvegt iilhivfaik ldfelgrell rhlkaaqqgd
      301 fssiicpfsi alllsvtrvq rfeeqvfdfl kssviksfkd vqllegakym qslfphgcci
      361 stmilevvnn svhswdhvtq glvefgfilm dsygpkkild gktaetssgl srmpnqhack
      421 lganilletf kihemirqei leqvlnrvvt rasspishfl dllsdiikys plvlqscssk
      481 vietfdylsf lpvqtvqgll kavqpllkvs msirdslilv lrkamfasql darksavagf
      541 llllknfkvl gslsssqcsq sigvsqvhvd ihsryssvan etfcleimds lkrclgqqad
      601 vrlmlyegfy dvlrrnsqla nsvmqtllsq lkqfyepepd vlpplkleac iltqgdqvsl
      661 qepldyllcc iqhclawyks rvvplqqeee eeegfyqhld dmlesithrm ikseledfel
      721 dksadfsqst gigiknnica slvmgicevl ieynffisnf sktkfetils lfmcykklsd
      781 ilneksgkgk tkmanrttds flsmkfvsdl ltalfrdstq sheeslsvlr ssnefmryav
      841 nvalqkvqql ketghvsgpd gqnpekvfqs lcditrvllw rytsiptsve elgkkekgkn
      901 isllcleglq kilsavqqfy qpkchqflka ldatdkeeee eevsvsqraa fqirqfqrsl
      961 lnllssqeed fksrealllv tvltslskll kpisaefvqm lswtskicke nswedasfsk
     1021 gmlsllfslh vsckspvsll rdlsqdihgh lgdldedvev ektnhfalvn lktaapavcl
     1081 lvlskaekvl eevdwlitkl kgqanqkiip eassqaaitn rpmekvtiiq lgtlltffhe
     1141 lvqtalpsgs cvdtllkdlc kmyttltalv kyylqvyqrs tgipknmekl vklsgshltp
     1201 lcysfisyvq nkhsrslkct gekektaagp tamaralret kpipnlifai eqyekflihl
     1261 skrskvnlmk hiklstsrdf kikgnildvv lrqeeedene egtasehegq nkepakkkrk
     1321 ketkcls
//
LOCUS       XP_061014664            1290 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA polymerase subunit gamma-1 isoform X1 [Dama dama].
ACCESSION   XP_061014664
VERSION     XP_061014664.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158681.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1290
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1290
                     /product="DNA polymerase subunit gamma-1 isoform X1"
                     /calculated_mol_wt=144777
     Region          105..397
                     /region_name="DNApol_Exo"
                     /note="DNA mitochondrial polymerase exonuclease domain;
                     pfam18136"
                     /db_xref="CDD:465664"
     Region          414..>456
                     /region_name="DNA_pol_A"
                     /note="Family A polymerase primarily fills DNA gaps that
                     arise during DNA repair, recombination and replication;
                     cl02626"
                     /db_xref="CDD:470638"
     Region          769..1187
                     /region_name="DNA_pol_gammaA"
                     /note="Pol gammaA is a family A polymerase that is
                     responsible for DNA replication and repair in
                     mitochondria; cd08641"
                     /db_xref="CDD:176478"
     Site            order(779,783,786..787,833..835,837,839..842,874..875,913,
                     927,931,1079,1086,1117..1119)
                     /site_type="active"
                     /db_xref="CDD:176478"
     Site            order(779,783,786..787,833..835,837,839..842,939,
                     1078..1079,1082,1086,1117..1119)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176478"
     Site            order(874..875,877,913,927,931,1119)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176478"
     CDS             1..1290
                     /gene="POLG"
                     /coded_by="XM_061158681.1:139..4011"
                     /db_xref="GeneID:133067779"
ORIGIN      
        1 msrllwrkva gatvgpgpvp apgrwvsssa sdpvpsdgpp ppppvpsseg gqlrhnplhi
       61 qmlsrglheq ifgpggerpd eaavhrsveh lqkhglwgqp aaplpdvelr lppllggsld
      121 qhfrllaqkq slpyleaans llqaqlpprp pswawaegwt rygpageaep vaipeeralv
      181 fdvevclaeg tcptlavais psawyswcsr rlveeryswt sqlspadlip levpasaggp
      241 aqqeqrerlv vghnvsfdra hireqyliqg shmrfldtms mhmaisglss fqrslwmaar
      301 qgkhkarppt qrgqksqska ngpaisswdw ldissvnnla dvhglyvggp rlekeprelf
      361 ikgnmkdvre nfqdlmqyca qdvwatyevf qqqlplfler cphpvtlagm lemgvsylpv
      421 nqnwerylae aqstyeelqr emkkslmdla ndacqllsge rykedpwlwd lewdvqefkq
      481 kkakkgkrre paaasklpve gadapgdprd qedpgppsee eefqrdvtar tcleqlrgtt
      541 ellpkrpqhl pghpgwyrkl cprlddpawt pgpsllslqm rvtpklmalt wdgfplhyse
      601 qhgwgylvpg rrdnlaqvpa gstlmsagaa cphtaiesly rrhcleqgkq qpeppqadla
      661 eefllsdsga lwqtveelgc leveaeakme nsreavpgql lpptaaggpk asqpayhhgn
      721 gpyndvdipg cwffklphkd gnscnvgspf akdflpkmed gtlqagpgga sgpraleink
      781 misfwrnahk rissqmvvwl prsvlpravt rhasydeegr ygailpqvvt agtitrrave
      841 ptwltasnar pdrvgselka mvqappgyvl vgadvdsqel wiaavlgdah fagmhgctaf
      901 gwmtlqgrks rgtdlhskta atvgisreha kiinygriyg agqpfaerll mqfnhrltrq
      961 eaaekaqqmy avtkglrryr lsdegewlvk eldlpvdrte dgwvslkdlr kiqreaskks
     1021 rwkkwevvae rawmggtese mfnkleniat sdiprtpvlg crisralepc avrgefmtsr
     1081 vnwvvqssav dylhlmlvam kwlfeefaid grfcisihde vrylvreedr yraalalqit
     1141 nlltrcmfah klglndlpqs vaffstvdid qclrkevtmd cttpsnptgm errygipqgi
     1201 ligvyteetr ikrdtctpmf taalftiart wkqprcplad kwirklwyiy tmeyysaikk
     1261 nafesvltrw vklepiihsk vsqkekhqys
//
LOCUS       XP_061014666            1270 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA polymerase subunit gamma-1 isoform X2 [Dama dama].
ACCESSION   XP_061014666
VERSION     XP_061014666.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158683.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1270
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1270
                     /product="DNA polymerase subunit gamma-1 isoform X2"
                     /calculated_mol_wt=142500
     Region          105..397
                     /region_name="DNApol_Exo"
                     /note="DNA mitochondrial polymerase exonuclease domain;
                     pfam18136"
                     /db_xref="CDD:465664"
     Region          414..>456
                     /region_name="DNA_pol_A"
                     /note="Family A polymerase primarily fills DNA gaps that
                     arise during DNA repair, recombination and replication;
                     cl02626"
                     /db_xref="CDD:470638"
     Region          769..1167
                     /region_name="DNA_pol_gammaA"
                     /note="Pol gammaA is a family A polymerase that is
                     responsible for DNA replication and repair in
                     mitochondria; cd08641"
                     /db_xref="CDD:176478"
     Site            order(779,783,786..787,833..835,837,839..842,874..875,913,
                     927,931,1079,1086,1117..1119)
                     /site_type="active"
                     /db_xref="CDD:176478"
     Site            order(779,783,786..787,833..835,837,839..842,939,
                     1078..1079,1082,1086,1117..1119)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176478"
     Site            order(874..875,877,913,927,931,1119)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176478"
     CDS             1..1270
                     /gene="POLG"
                     /coded_by="XM_061158683.1:139..3951"
                     /db_xref="GeneID:133067779"
ORIGIN      
        1 msrllwrkva gatvgpgpvp apgrwvsssa sdpvpsdgpp ppppvpsseg gqlrhnplhi
       61 qmlsrglheq ifgpggerpd eaavhrsveh lqkhglwgqp aaplpdvelr lppllggsld
      121 qhfrllaqkq slpyleaans llqaqlpprp pswawaegwt rygpageaep vaipeeralv
      181 fdvevclaeg tcptlavais psawyswcsr rlveeryswt sqlspadlip levpasaggp
      241 aqqeqrerlv vghnvsfdra hireqyliqg shmrfldtms mhmaisglss fqrslwmaar
      301 qgkhkarppt qrgqksqska ngpaisswdw ldissvnnla dvhglyvggp rlekeprelf
      361 ikgnmkdvre nfqdlmqyca qdvwatyevf qqqlplfler cphpvtlagm lemgvsylpv
      421 nqnwerylae aqstyeelqr emkkslmdla ndacqllsge rykedpwlwd lewdvqefkq
      481 kkakkgkrre paaasklpve gadapgdprd qedpgppsee eefqrdvtar tcleqlrgtt
      541 ellpkrpqhl pghpgwyrkl cprlddpawt pgpsllslqm rvtpklmalt wdgfplhyse
      601 qhgwgylvpg rrdnlaqvpa gstlmsagaa cphtaiesly rrhcleqgkq qpeppqadla
      661 eefllsdsga lwqtveelgc leveaeakme nsreavpgql lpptaaggpk asqpayhhgn
      721 gpyndvdipg cwffklphkd gnscnvgspf akdflpkmed gtlqagpgga sgpraleink
      781 misfwrnahk rissqmvvwl prsvlpravt rhasydeegr ygailpqvvt agtitrrave
      841 ptwltasnar pdrvgselka mvqappgyvl vgadvdsqel wiaavlgdah fagmhgctaf
      901 gwmtlqgrks rgtdlhskta atvgisreha kiinygriyg agqpfaerll mqfnhrltrq
      961 eaaekaqqmy avtkglrryr lsdegewlvk eldlpvdrte dgwvslkdlr kiqreaskks
     1021 rwkkwevvae rawmggtese mfnkleniat sdiprtpvlg crisralepc avrgefmtsr
     1081 vnwvvqssav dylhlmlvam kwlfeefaid grfcisihde vrylvreedr yraalalqit
     1141 nlltstvdid qclrkevtmd cttpsnptgm errygipqgi ligvyteetr ikrdtctpmf
     1201 taalftiart wkqprcplad kwirklwyiy tmeyysaikk nafesvltrw vklepiihsk
     1261 vsqkekhqys
//
LOCUS       XP_061014667            1217 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA polymerase subunit gamma-1 isoform X3 [Dama dama].
ACCESSION   XP_061014667
VERSION     XP_061014667.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158684.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1217
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1217
                     /product="DNA polymerase subunit gamma-1 isoform X3"
                     /calculated_mol_wt=135880
     Region          105..397
                     /region_name="DNApol_Exo"
                     /note="DNA mitochondrial polymerase exonuclease domain;
                     pfam18136"
                     /db_xref="CDD:465664"
     Region          414..>456
                     /region_name="DNA_pol_A"
                     /note="Family A polymerase primarily fills DNA gaps that
                     arise during DNA repair, recombination and replication;
                     cl02626"
                     /db_xref="CDD:470638"
     Region          769..1187
                     /region_name="DNA_pol_gammaA"
                     /note="Pol gammaA is a family A polymerase that is
                     responsible for DNA replication and repair in
                     mitochondria; cd08641"
                     /db_xref="CDD:176478"
     Site            order(779,783,786..787,833..835,837,839..842,874..875,913,
                     927,931,1079,1086,1117..1119)
                     /site_type="active"
                     /db_xref="CDD:176478"
     Site            order(779,783,786..787,833..835,837,839..842,939,
                     1078..1079,1082,1086,1117..1119)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176478"
     Site            order(874..875,877,913,927,931,1119)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176478"
     CDS             1..1217
                     /gene="POLG"
                     /coded_by="XM_061158684.1:139..3792"
                     /db_xref="GeneID:133067779"
ORIGIN      
        1 msrllwrkva gatvgpgpvp apgrwvsssa sdpvpsdgpp ppppvpsseg gqlrhnplhi
       61 qmlsrglheq ifgpggerpd eaavhrsveh lqkhglwgqp aaplpdvelr lppllggsld
      121 qhfrllaqkq slpyleaans llqaqlpprp pswawaegwt rygpageaep vaipeeralv
      181 fdvevclaeg tcptlavais psawyswcsr rlveeryswt sqlspadlip levpasaggp
      241 aqqeqrerlv vghnvsfdra hireqyliqg shmrfldtms mhmaisglss fqrslwmaar
      301 qgkhkarppt qrgqksqska ngpaisswdw ldissvnnla dvhglyvggp rlekeprelf
      361 ikgnmkdvre nfqdlmqyca qdvwatyevf qqqlplfler cphpvtlagm lemgvsylpv
      421 nqnwerylae aqstyeelqr emkkslmdla ndacqllsge rykedpwlwd lewdvqefkq
      481 kkakkgkrre paaasklpve gadapgdprd qedpgppsee eefqrdvtar tcleqlrgtt
      541 ellpkrpqhl pghpgwyrkl cprlddpawt pgpsllslqm rvtpklmalt wdgfplhyse
      601 qhgwgylvpg rrdnlaqvpa gstlmsagaa cphtaiesly rrhcleqgkq qpeppqadla
      661 eefllsdsga lwqtveelgc leveaeakme nsreavpgql lpptaaggpk asqpayhhgn
      721 gpyndvdipg cwffklphkd gnscnvgspf akdflpkmed gtlqagpgga sgpraleink
      781 misfwrnahk rissqmvvwl prsvlpravt rhasydeegr ygailpqvvt agtitrrave
      841 ptwltasnar pdrvgselka mvqappgyvl vgadvdsqel wiaavlgdah fagmhgctaf
      901 gwmtlqgrks rgtdlhskta atvgisreha kiinygriyg agqpfaerll mqfnhrltrq
      961 eaaekaqqmy avtkglrryr lsdegewlvk eldlpvdrte dgwvslkdlr kiqreaskks
     1021 rwkkwevvae rawmggtese mfnkleniat sdiprtpvlg crisralepc avrgefmtsr
     1081 vnwvvqssav dylhlmlvam kwlfeefaid grfcisihde vrylvreedr yraalalqit
     1141 nlltrcmfah klglndlpqs vaffstvdid qclrkevtmd cttpsnptgm errygipqge
     1201 aldiyqiiel tkgslek
//
LOCUS       XP_061014668            1197 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA polymerase subunit gamma-1 isoform X4 [Dama dama].
ACCESSION   XP_061014668
VERSION     XP_061014668.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158685.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1197
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1197
                     /product="DNA polymerase subunit gamma-1 isoform X4"
                     /calculated_mol_wt=133604
     Region          105..397
                     /region_name="DNApol_Exo"
                     /note="DNA mitochondrial polymerase exonuclease domain;
                     pfam18136"
                     /db_xref="CDD:465664"
     Region          414..>456
                     /region_name="DNA_pol_A"
                     /note="Family A polymerase primarily fills DNA gaps that
                     arise during DNA repair, recombination and replication;
                     cl02626"
                     /db_xref="CDD:470638"
     Region          769..1167
                     /region_name="DNA_pol_gammaA"
                     /note="Pol gammaA is a family A polymerase that is
                     responsible for DNA replication and repair in
                     mitochondria; cd08641"
                     /db_xref="CDD:176478"
     Site            order(779,783,786..787,833..835,837,839..842,874..875,913,
                     927,931,1079,1086,1117..1119)
                     /site_type="active"
                     /db_xref="CDD:176478"
     Site            order(779,783,786..787,833..835,837,839..842,939,
                     1078..1079,1082,1086,1117..1119)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176478"
     Site            order(874..875,877,913,927,931,1119)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176478"
     CDS             1..1197
                     /gene="POLG"
                     /coded_by="XM_061158685.1:139..3732"
                     /db_xref="GeneID:133067779"
ORIGIN      
        1 msrllwrkva gatvgpgpvp apgrwvsssa sdpvpsdgpp ppppvpsseg gqlrhnplhi
       61 qmlsrglheq ifgpggerpd eaavhrsveh lqkhglwgqp aaplpdvelr lppllggsld
      121 qhfrllaqkq slpyleaans llqaqlpprp pswawaegwt rygpageaep vaipeeralv
      181 fdvevclaeg tcptlavais psawyswcsr rlveeryswt sqlspadlip levpasaggp
      241 aqqeqrerlv vghnvsfdra hireqyliqg shmrfldtms mhmaisglss fqrslwmaar
      301 qgkhkarppt qrgqksqska ngpaisswdw ldissvnnla dvhglyvggp rlekeprelf
      361 ikgnmkdvre nfqdlmqyca qdvwatyevf qqqlplfler cphpvtlagm lemgvsylpv
      421 nqnwerylae aqstyeelqr emkkslmdla ndacqllsge rykedpwlwd lewdvqefkq
      481 kkakkgkrre paaasklpve gadapgdprd qedpgppsee eefqrdvtar tcleqlrgtt
      541 ellpkrpqhl pghpgwyrkl cprlddpawt pgpsllslqm rvtpklmalt wdgfplhyse
      601 qhgwgylvpg rrdnlaqvpa gstlmsagaa cphtaiesly rrhcleqgkq qpeppqadla
      661 eefllsdsga lwqtveelgc leveaeakme nsreavpgql lpptaaggpk asqpayhhgn
      721 gpyndvdipg cwffklphkd gnscnvgspf akdflpkmed gtlqagpgga sgpraleink
      781 misfwrnahk rissqmvvwl prsvlpravt rhasydeegr ygailpqvvt agtitrrave
      841 ptwltasnar pdrvgselka mvqappgyvl vgadvdsqel wiaavlgdah fagmhgctaf
      901 gwmtlqgrks rgtdlhskta atvgisreha kiinygriyg agqpfaerll mqfnhrltrq
      961 eaaekaqqmy avtkglrryr lsdegewlvk eldlpvdrte dgwvslkdlr kiqreaskks
     1021 rwkkwevvae rawmggtese mfnkleniat sdiprtpvlg crisralepc avrgefmtsr
     1081 vnwvvqssav dylhlmlvam kwlfeefaid grfcisihde vrylvreedr yraalalqit
     1141 nlltstvdid qclrkevtmd cttpsnptgm errygipqge aldiyqiiel tkgslek
//
LOCUS       XP_061014669            1157 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA polymerase subunit gamma-1 isoform X5 [Dama dama].
ACCESSION   XP_061014669
VERSION     XP_061014669.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158686.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1157
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1157
                     /product="DNA polymerase subunit gamma-1 isoform X5"
                     /calculated_mol_wt=129310
     Region          105..397
                     /region_name="DNApol_Exo"
                     /note="DNA mitochondrial polymerase exonuclease domain;
                     pfam18136"
                     /db_xref="CDD:465664"
     Region          414..>456
                     /region_name="DNA_pol_A"
                     /note="Family A polymerase primarily fills DNA gaps that
                     arise during DNA repair, recombination and replication;
                     cl02626"
                     /db_xref="CDD:470638"
     Region          769..1147
                     /region_name="DNA_pol_A"
                     /note="Family A polymerase primarily fills DNA gaps that
                     arise during DNA repair, recombination and replication;
                     cl02626"
                     /db_xref="CDD:470638"
     Site            order(779,783,786..787,833..835,837,839..842,874..875,913,
                     927,931,1079,1086,1117..1119)
                     /site_type="active"
                     /db_xref="CDD:176473"
     Site            order(779,783,786..787,833..835,837,839..842,939,
                     1078..1079,1082,1086,1117..1119)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176473"
     Site            order(874..875,877,913,927,931,1119)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176473"
     CDS             1..1157
                     /gene="POLG"
                     /coded_by="XM_061158686.1:139..3612"
                     /db_xref="GeneID:133067779"
ORIGIN      
        1 msrllwrkva gatvgpgpvp apgrwvsssa sdpvpsdgpp ppppvpsseg gqlrhnplhi
       61 qmlsrglheq ifgpggerpd eaavhrsveh lqkhglwgqp aaplpdvelr lppllggsld
      121 qhfrllaqkq slpyleaans llqaqlpprp pswawaegwt rygpageaep vaipeeralv
      181 fdvevclaeg tcptlavais psawyswcsr rlveeryswt sqlspadlip levpasaggp
      241 aqqeqrerlv vghnvsfdra hireqyliqg shmrfldtms mhmaisglss fqrslwmaar
      301 qgkhkarppt qrgqksqska ngpaisswdw ldissvnnla dvhglyvggp rlekeprelf
      361 ikgnmkdvre nfqdlmqyca qdvwatyevf qqqlplfler cphpvtlagm lemgvsylpv
      421 nqnwerylae aqstyeelqr emkkslmdla ndacqllsge rykedpwlwd lewdvqefkq
      481 kkakkgkrre paaasklpve gadapgdprd qedpgppsee eefqrdvtar tcleqlrgtt
      541 ellpkrpqhl pghpgwyrkl cprlddpawt pgpsllslqm rvtpklmalt wdgfplhyse
      601 qhgwgylvpg rrdnlaqvpa gstlmsagaa cphtaiesly rrhcleqgkq qpeppqadla
      661 eefllsdsga lwqtveelgc leveaeakme nsreavpgql lpptaaggpk asqpayhhgn
      721 gpyndvdipg cwffklphkd gnscnvgspf akdflpkmed gtlqagpgga sgpraleink
      781 misfwrnahk rissqmvvwl prsvlpravt rhasydeegr ygailpqvvt agtitrrave
      841 ptwltasnar pdrvgselka mvqappgyvl vgadvdsqel wiaavlgdah fagmhgctaf
      901 gwmtlqgrks rgtdlhskta atvgisreha kiinygriyg agqpfaerll mqfnhrltrq
      961 eaaekaqqmy avtkglrryr lsdegewlvk eldlpvdrte dgwvslkdlr kiqreaskks
     1021 rwkkwevvae rawmggtese mfnkleniat sdiprtpvlg crisralepc avrgefmtsr
     1081 vnwvvqssav dylhlmlvam kwlfeefaid grfcisihde vrylvreedr yraalalqit
     1141 nlltrhfnrc lhrgnqn
//
LOCUS       XP_061014670            1893 aa            linear   MAM 02-DEC-2023
DEFINITION  treslin isoform X1 [Dama dama].
ACCESSION   XP_061014670
VERSION     XP_061014670.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158687.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1893
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1893
                     /product="treslin isoform X1"
                     /calculated_mol_wt=208298
     Region          211..1008
                     /region_name="Treslin_N"
                     /note="Treslin N-terminus; pfam15292"
                     /db_xref="CDD:464618"
     Region          <1174..1668
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1893
                     /gene="TICRR"
                     /coded_by="XM_061158687.1:120..5801"
                     /db_xref="GeneID:133067780"
ORIGIN      
        1 macchnvmll ldtaggvave nlvrraalrl ltylscrfgl arvrwafrff dsqgarsrps
       61 rvsdfrelgv rsweefeeel earlgdgaqg ahlpgpapra shthsalmet lldyqwdrpe
      121 itsptkpilr nsgrrlldve geareakstl ggfvnavfll apcphsqrel lqfvsgsetq
      181 aqslpptpkq vmekllprrv qeimrtrkit lywvdttdwp klwkspdhlg ywtvcellyh
      241 mggtvlpfes fsqdftkagg tllsgerkls rephlspwis tlptdstlnc llynspeyea
      301 sfprmegtlf fpvegkelqe twtvtlepla mhqrhfqkpv riflkgtvtq wslpasgtvg
      361 tdswmlqspn gdrstqrmlf qqlvnrltae elhlvasvdp gegwppitgv ispfsisati
      421 ltlfrtrete sqrhllqtvv aegpqdsasl fsevvdgvlk qidsslevpa asalpvpewa
      481 qqelgrsapw tsavvekwfp csnlsgasss lmesfwllqa asspkeepsk tesdltrgls
      541 elyqrksree ysvsnqedsk kkrgvprtpv rkkmntmcrs lkmlnvarln vkaqklhpdg
      601 spdtagekgi qktangrtad rlenrgrilr sskpkdfkte eellshihen yqktvatgdt
      661 tlyscarnti snikaflksk gtkgleeasl emnclyqvrn nflktskslr qnlgkldkeg
      721 kvrecqlqvf lrlelclqcp svhdrvegle qvvdeltdll rmvcltedsa ylaqfleeil
      781 elyidsipki lgslydslgf vipqklagvl padffsddsm tqesksplsv pltsnahrsv
      841 sgstesdqle elrtrsakkr rknairhksi tevsqnlrqi empkvtkrat knenshptlq
      901 qpslpvkdtv qevtkvrrnl fnqemispsk rsvkrglprs hsvsavegle ykhdnfkrtk
      961 gyrklltksv aetpvhkqis rrllhrqikg rssdpgpdin vveespekge dvgslrrspr
     1021 ikqlafsrtn sasfyslsqp ksrsiqrvhs fqqmksdqre nspvqsirsp krllfgamse
     1081 mispsekgsa rikrpsgntl gseiptayqt peksywksps sckatprkvp rtpqtplrtp
     1141 erlqkspaem tpakqvifke flkdfsphgw nslsrpkvtp rkghslakga splekvprtp
     1201 qrqgsqpprf lqnsswpclv dsspestscp aalvsstaqt rsecltpsrs sarappraaa
     1261 lglqkqaase gtspsqkhql prgseapqae klpqlwnnkt vktperpgna altspkkpvt
     1321 spsrgiskks slgefaiasp ssgqvgwqea qkspsvttpp scpapltpps asqvapsdfw
     1381 pppppskhgk rhkktleteq eflegqpdsl aalrvaitdn paaitdagkn qkavtlsppa
     1441 spethgypgt gfggvwhtss pllvatdsdc ltlldeaehh gcdnlkssis pldegeglrp
     1501 gtcekpspcd pgipptspss gprspltpqy dahctkqhqa atqledqqas arpcrapasp
     1561 qayevelemq asglpklrik kidssslpaa epppreestl pgpsvprasr ssgkpeapcl
     1621 rpshstpgks ggqtyicqsc tptrcpystp spfqtevgvp wtpspkhsgk ttpdtikdwp
     1681 rrkravdcsl gpsagrsevs adlpggvspl epegkergle lgigrapvlg efelegvcql
     1741 pdqspprdsv ptaeeaffwg qfglgsrkrc lsaeeeaerq akricdqqgd leewspgtsv
     1801 rqlpsvaddg afvpgstppp gcavrsclsa sglqalthsp llfqgktpss qhkdagdenv
     1861 dvfpptaeds pfsrafsrrr pnirtysrkk lls
//
LOCUS       XP_061014671            1653 aa            linear   MAM 02-DEC-2023
DEFINITION  treslin isoform X2 [Dama dama].
ACCESSION   XP_061014671
VERSION     XP_061014671.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158688.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1653
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1653
                     /product="treslin isoform X2"
                     /calculated_mol_wt=180959
     Region          1..768
                     /region_name="Treslin_N"
                     /note="Treslin N-terminus; pfam15292"
                     /db_xref="CDD:464618"
     Region          <934..1428
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1653
                     /gene="TICRR"
                     /coded_by="XM_061158688.1:195..5156"
                     /db_xref="GeneID:133067780"
ORIGIN      
        1 mggtvlpfes fsqdftkagg tllsgerkls rephlspwis tlptdstlnc llynspeyea
       61 sfprmegtlf fpvegkelqe twtvtlepla mhqrhfqkpv riflkgtvtq wslpasgtvg
      121 tdswmlqspn gdrstqrmlf qqlvnrltae elhlvasvdp gegwppitgv ispfsisati
      181 ltlfrtrete sqrhllqtvv aegpqdsasl fsevvdgvlk qidsslevpa asalpvpewa
      241 qqelgrsapw tsavvekwfp csnlsgasss lmesfwllqa asspkeepsk tesdltrgls
      301 elyqrksree ysvsnqedsk kkrgvprtpv rkkmntmcrs lkmlnvarln vkaqklhpdg
      361 spdtagekgi qktangrtad rlenrgrilr sskpkdfkte eellshihen yqktvatgdt
      421 tlyscarnti snikaflksk gtkgleeasl emnclyqvrn nflktskslr qnlgkldkeg
      481 kvrecqlqvf lrlelclqcp svhdrvegle qvvdeltdll rmvcltedsa ylaqfleeil
      541 elyidsipki lgslydslgf vipqklagvl padffsddsm tqesksplsv pltsnahrsv
      601 sgstesdqle elrtrsakkr rknairhksi tevsqnlrqi empkvtkrat knenshptlq
      661 qpslpvkdtv qevtkvrrnl fnqemispsk rsvkrglprs hsvsavegle ykhdnfkrtk
      721 gyrklltksv aetpvhkqis rrllhrqikg rssdpgpdin vveespekge dvgslrrspr
      781 ikqlafsrtn sasfyslsqp ksrsiqrvhs fqqmksdqre nspvqsirsp krllfgamse
      841 mispsekgsa rikrpsgntl gseiptayqt peksywksps sckatprkvp rtpqtplrtp
      901 erlqkspaem tpakqvifke flkdfsphgw nslsrpkvtp rkghslakga splekvprtp
      961 qrqgsqpprf lqnsswpclv dsspestscp aalvsstaqt rsecltpsrs sarappraaa
     1021 lglqkqaase gtspsqkhql prgseapqae klpqlwnnkt vktperpgna altspkkpvt
     1081 spsrgiskks slgefaiasp ssgqvgwqea qkspsvttpp scpapltpps asqvapsdfw
     1141 pppppskhgk rhkktleteq eflegqpdsl aalrvaitdn paaitdagkn qkavtlsppa
     1201 spethgypgt gfggvwhtss pllvatdsdc ltlldeaehh gcdnlkssis pldegeglrp
     1261 gtcekpspcd pgipptspss gprspltpqy dahctkqhqa atqledqqas arpcrapasp
     1321 qayevelemq asglpklrik kidssslpaa epppreestl pgpsvprasr ssgkpeapcl
     1381 rpshstpgks ggqtyicqsc tptrcpystp spfqtevgvp wtpspkhsgk ttpdtikdwp
     1441 rrkravdcsl gpsagrsevs adlpggvspl epegkergle lgigrapvlg efelegvcql
     1501 pdqspprdsv ptaeeaffwg qfglgsrkrc lsaeeeaerq akricdqqgd leewspgtsv
     1561 rqlpsvaddg afvpgstppp gcavrsclsa sglqalthsp llfqgktpss qhkdagdenv
     1621 dvfpptaeds pfsrafsrrr pnirtysrkk lls
//
LOCUS       XP_061014672            1368 aa            linear   MAM 02-DEC-2023
DEFINITION  kinesin-like protein KIF7 isoform X1 [Dama dama].
ACCESSION   XP_061014672
VERSION     XP_061014672.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158689.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1368
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1368
                     /product="kinesin-like protein KIF7 isoform X1"
                     /calculated_mol_wt=153529
     Region          33..368
                     /region_name="KISc_KIF4"
                     /note="Kinesin motor domain, KIF4-like subfamily; cd01372"
                     /db_xref="CDD:276823"
     Site            order(41,112,115,117..120,270)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276823"
     Site            order(320,323,326)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276823"
     Region          <720..>1221
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..1368
                     /gene="KIF7"
                     /coded_by="XM_061158689.1:387..4493"
                     /db_xref="GeneID:133067781"
ORIGIN      
        1 miegtgerlq gwkqqplnmg leaqrlpgae eapvrvalrv rpllpkellh ghqsclrvep
       61 ghgrvtlgrd rhfsfhvvld edagqeavyq acvqplleaf fegfnvtvfa ygqtgsgkty
      121 tmgeasvasl hedeqgiipr amaeafklid endlldclvh vsylevykee frdllevgta
      181 srdiqlredd rgnvvlcgvk evdvegldev lsllemgnaa rhtgathlnr lssrshtift
      241 vtleqrgrap srlprpaagq llvskfhfvd lagservlkt gstgerlkes iqinssllal
      301 gnvisalgda qrrgshipyr dskitrilkd slggnaktmm iacvspsssd fdetlntlny
      361 asraqnirnr atvnwrpeae rgpeeavasa rgpprhrset riihrgrrap gpaaaaaarl
      421 gaecaryrar tdaaysllre lqaepglpga aarkvrdwlc avegersals sasgpdsgie
      481 sasaeeqatq gpggrkedeg plqllalqsq varleeenrd flaaledame qyklqsdrlr
      541 eqqeemaelr lrlelvrpgw gapgilqglp pgsfvprpht aplggahthv lgvmpptcip
      601 gdevslenrg eqmkngreag akfltegdrl gsgssdasee eeeeeekegp prqslrprrn
      661 giskwnqrmg acpgsplnrk gpelrleelg aaipgprvvg gskalaqprq apaamasewr
      721 laqaqqkire lainirmkee ligelvrtgk aaqalnrqhs qriqelerea ervraelseg
      781 qrqlrelegr epqdaaersq lqefrrrvaa aqnqvqvlke kkqaterlas lsaqsekrlq
      841 elernvqlmr qqqgqlqrrl reeteqkrrl etemnkrqhr vkelelkheq qqkilkikte
      901 eiaafqrkrr sgsngsvvsl eqqqkieeqk kwldqemekv lqqrraleel geelhkreai
      961 lakkealmqe ktgleskrlr ssqvrpsqal nedivrvssr lehlekelse ksgqlrqgsa
     1021 qsqqqirgei dalrqekdll lkqrleidgk lrqgsllspe eertlfqlde aiealdaaie
     1081 ykneaitcrq rvlrasasll sqcemnlmak lsylsssetr allckyfdkv vtlreeqhqq
     1141 qvafselelq leeqqrlvyw leaalerqrl emdrqltlqq rgheqhvqll lqqsrdhlge
     1201 gladsrrqye triqalekel grhvrlnqel kqklgslsaa sqsrvmggek rtpclenrqa
     1261 pgsedelypa peplwqptgt egaprpreem rdlvhaplpl twkrsslcse eqgspeelrq
     1321 reaaeppvgr vlsvgeaglp wnlgplakpr relrrvspgm idvrknpl
//
LOCUS       XP_061014673            1363 aa            linear   MAM 02-DEC-2023
DEFINITION  kinesin-like protein KIF7 isoform X2 [Dama dama].
ACCESSION   XP_061014673
VERSION     XP_061014673.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158690.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1363
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1363
                     /product="kinesin-like protein KIF7 isoform X2"
                     /calculated_mol_wt=152961
     Region          33..368
                     /region_name="KISc_KIF4"
                     /note="Kinesin motor domain, KIF4-like subfamily; cd01372"
                     /db_xref="CDD:276823"
     Site            order(41,112,115,117..120,270)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276823"
     Site            order(320,323,326)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276823"
     Region          <718..>1268
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..1363
                     /gene="KIF7"
                     /coded_by="XM_061158690.1:386..4477"
                     /db_xref="GeneID:133067781"
ORIGIN      
        1 miegtgerlq gwkqqplnmg leaqrlpgae eapvrvalrv rpllpkellh ghqsclrvep
       61 ghgrvtlgrd rhfsfhvvld edagqeavyq acvqplleaf fegfnvtvfa ygqtgsgkty
      121 tmgeasvasl hedeqgiipr amaeafklid endlldclvh vsylevykee frdllevgta
      181 srdiqlredd rgnvvlcgvk evdvegldev lsllemgnaa rhtgathlnr lssrshtift
      241 vtleqrgrap srlprpaagq llvskfhfvd lagservlkt gstgerlkes iqinssllal
      301 gnvisalgda qrrgshipyr dskitrilkd slggnaktmm iacvspsssd fdetlntlny
      361 asraqnirnr atvnwrpeae rgpeeavasa rgpprhrset riihrgrrap gpaaaaaarl
      421 gaecaryrar tdaaysllre lqaepglpga aarkvrdwlc avegersals sasgpdsgie
      481 sasaeeqatq gpggrkedeg plqllalqsq varleeenrd flaaledame qyklqsdrlr
      541 eqqeemaelr lrlelvrpgw gapgilqglp pgsfvprpht aplggahthv lgvmpptcip
      601 gdevslenrg eqmkngreag akfltegdrl gsgssdasee eeeeeekegp prqslrprrn
      661 giskwnqrmg acpgsplnrk gpelrleelg aaipgprvvg gskalaqprq apaamasewr
      721 laqaqqkire lainirmkee ligelvrtgk aaqalnrqhs qriqelerea ervraelseg
      781 qrqlrelegr epqdaaersq lqefrrrvaa aqnqvqvlke kkqaterlas lsaqsekrlq
      841 elernvqlmr qqqgqlqrrl reeteqkrrl etemnkrqhr vkelelkheq qqkilkikte
      901 eiaafqrkrr sgsngsvvsl eqqqkieeqk kwldqemekv lqqrraleel geelhkreai
      961 lakkealmqe ktgleskrlr ssqalnediv rvssrlehle kelseksgql rqgsaqsqqq
     1021 irgeidalrq ekdlllkqrl eidgklrqgs llspeeertl fqldeaieal daaieyknea
     1081 itcrqrvlra sasllsqcem nlmaklsyls ssetrallck yfdkvvtlre eqhqqqvafs
     1141 elelqleeqq rlvywleaal erqrlemdrq ltlqqrgheq hvqlllqqsr dhlgeglads
     1201 rrqyetriqa lekelgrhvr lnqelkqklg slsaasqsrv mggekrtpcl enrqapgsed
     1261 elypapeplw qptgtegapr preemrdlvh aplpltwkrs slcseeqgsp eelrqreaae
     1321 ppvgrvlsvg eaglpwnlgp lakprrelrr vspgmidvrk npl
//
LOCUS       XP_061014674            1350 aa            linear   MAM 02-DEC-2023
DEFINITION  kinesin-like protein KIF7 isoform X3 [Dama dama].
ACCESSION   XP_061014674
VERSION     XP_061014674.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158691.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1350
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1350
                     /product="kinesin-like protein KIF7 isoform X3"
                     /calculated_mol_wt=151462
     Region          15..350
                     /region_name="KISc_KIF4"
                     /note="Kinesin motor domain, KIF4-like subfamily; cd01372"
                     /db_xref="CDD:276823"
     Site            order(23,94,97,99..102,252)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276823"
     Site            order(302,305,308)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276823"
     Region          <702..>1203
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..1350
                     /gene="KIF7"
                     /coded_by="XM_061158691.1:161..4213"
                     /db_xref="GeneID:133067781"
ORIGIN      
        1 mgleaqrlpg aeeapvrval rvrpllpkel lhghqsclrv epghgrvtlg rdrhfsfhvv
       61 ldedagqeav yqacvqplle affegfnvtv faygqtgsgk tytmgeasva slhedeqgii
      121 pramaeafkl idendlldcl vhvsylevyk eefrdllevg tasrdiqlre ddrgnvvlcg
      181 vkevdvegld evlsllemgn aarhtgathl nrlssrshti ftvtleqrgr apsrlprpaa
      241 gqllvskfhf vdlagservl ktgstgerlk esiqinssll algnvisalg daqrrgship
      301 yrdskitril kdslggnakt mmiacvspss sdfdetlntl nyasraqnir nratvnwrpe
      361 aergpeeava sargpprhrs etriihrgrr apgpaaaaaa rlgaecaryr artdaaysll
      421 relqaepglp gaaarkvrdw lcavegersa lssasgpdsg iesasaeeqa tqgpggrked
      481 egplqllalq sqvarleeen rdflaaleda meqyklqsdr lreqqeemae lrlrlelvrp
      541 gwgapgilqg lppgsfvprp htaplggaht hvlgvmpptc ipgdevslen rgeqmkngre
      601 agakfltegd rlgsgssdas eeeeeeeeke gpprqslrpr rngiskwnqr mgacpgspln
      661 rkgpelrlee lgaaipgprv vggskalaqp rqapaamase wrlaqaqqki relainirmk
      721 eeligelvrt gkaaqalnrq hsqriqeler eaervraels egqrqlrele grepqdaaer
      781 sqlqefrrrv aaaqnqvqvl kekkqaterl aslsaqsekr lqelernvql mrqqqgqlqr
      841 rlreeteqkr rletemnkrq hrvkelelkh eqqqkilkik teeiaafqrk rrsgsngsvv
      901 sleqqqkiee qkkwldqeme kvlqqrrale elgeelhkre ailakkealm qektgleskr
      961 lrssqvrpsq alnedivrvs srlehlekel seksgqlrqg saqsqqqirg eidalrqekd
     1021 lllkqrleid gklrqgslls peeertlfql deaiealdaa ieykneaitc rqrvlrasas
     1081 llsqcemnlm aklsylssse trallckyfd kvvtlreeqh qqqvafsele lqleeqqrlv
     1141 ywleaalerq rlemdrqltl qqrgheqhvq lllqqsrdhl gegladsrrq yetriqalek
     1201 elgrhvrlnq elkqklgsls aasqsrvmgg ekrtpclenr qapgsedely papeplwqpt
     1261 gtegaprpre emrdlvhapl pltwkrsslc seeqgspeel rqreaaeppv grvlsvgeag
     1321 lpwnlgplak prrelrrvsp gmidvrknpl
//
LOCUS       XP_061014675             517 aa            linear   MAM 02-DEC-2023
DEFINITION  perilipin-1 [Dama dama].
ACCESSION   XP_061014675
VERSION     XP_061014675.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158692.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..517
                     /product="perilipin-1"
                     /calculated_mol_wt=55208
     Region          13..415
                     /region_name="Perilipin"
                     /note="Perilipin family; pfam03036"
                     /db_xref="CDD:460784"
     CDS             1..517
                     /gene="PLIN1"
                     /coded_by="XM_061158692.1:482..2035"
                     /db_xref="GeneID:133067783"
ORIGIN      
        1 mavnkgptll dgdlpeqenv lqrvlqlpvv sgtcecfqkt yastkeahpl vasvcnayek
       61 gvqgasslaa wsmepvvrrl stqfvaanel acrgldhlee kipalqyppe kiaselkdti
      121 strlrsarns isvpiastsd kvlgaalagc elawgmardt aeyaantrag rlasggadla
      181 lggvekmvef llppaneesa papglqdaqk ppqakpslms rvgalantls rhtfqttara
      241 lkqgqalamw ipgvaplssl aqwgasaamq vvsrrqsevr vpwlrslaaa reehhedhtd
      301 tegeeteeee eeeaaeeskl segavmpgpq gllgsvahtl qkalqstvsv amwapaavla
      361 magrtlhltp aratsssksr amslsdalkg vtdnvvgtvv hyvplprlsl mepesefrdi
      421 dnppaeterr eaerrgsgap pacpepaprp apprsslrst rgpgaeervd aatlpraafp
      481 amprekptrr vsdsffrpsv mepilgraqy sqlrkks
//
LOCUS       XP_061014676             517 aa            linear   MAM 02-DEC-2023
DEFINITION  perilipin-1 [Dama dama].
ACCESSION   XP_061014676
VERSION     XP_061014676.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158693.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..517
                     /product="perilipin-1"
                     /calculated_mol_wt=55208
     Region          13..415
                     /region_name="Perilipin"
                     /note="Perilipin family; pfam03036"
                     /db_xref="CDD:460784"
     CDS             1..517
                     /gene="PLIN1"
                     /coded_by="XM_061158693.1:311..1864"
                     /db_xref="GeneID:133067783"
ORIGIN      
        1 mavnkgptll dgdlpeqenv lqrvlqlpvv sgtcecfqkt yastkeahpl vasvcnayek
       61 gvqgasslaa wsmepvvrrl stqfvaanel acrgldhlee kipalqyppe kiaselkdti
      121 strlrsarns isvpiastsd kvlgaalagc elawgmardt aeyaantrag rlasggadla
      181 lggvekmvef llppaneesa papglqdaqk ppqakpslms rvgalantls rhtfqttara
      241 lkqgqalamw ipgvaplssl aqwgasaamq vvsrrqsevr vpwlrslaaa reehhedhtd
      301 tegeeteeee eeeaaeeskl segavmpgpq gllgsvahtl qkalqstvsv amwapaavla
      361 magrtlhltp aratsssksr amslsdalkg vtdnvvgtvv hyvplprlsl mepesefrdi
      421 dnppaeterr eaerrgsgap pacpepaprp apprsslrst rgpgaeervd aatlpraafp
      481 amprekptrr vsdsffrpsv mepilgraqy sqlrkks
//
LOCUS       XP_061014677             517 aa            linear   MAM 02-DEC-2023
DEFINITION  perilipin-1 [Dama dama].
ACCESSION   XP_061014677
VERSION     XP_061014677.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158694.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..517
                     /product="perilipin-1"
                     /calculated_mol_wt=55208
     Region          13..415
                     /region_name="Perilipin"
                     /note="Perilipin family; pfam03036"
                     /db_xref="CDD:460784"
     CDS             1..517
                     /gene="PLIN1"
                     /coded_by="XM_061158694.1:430..1983"
                     /db_xref="GeneID:133067783"
ORIGIN      
        1 mavnkgptll dgdlpeqenv lqrvlqlpvv sgtcecfqkt yastkeahpl vasvcnayek
       61 gvqgasslaa wsmepvvrrl stqfvaanel acrgldhlee kipalqyppe kiaselkdti
      121 strlrsarns isvpiastsd kvlgaalagc elawgmardt aeyaantrag rlasggadla
      181 lggvekmvef llppaneesa papglqdaqk ppqakpslms rvgalantls rhtfqttara
      241 lkqgqalamw ipgvaplssl aqwgasaamq vvsrrqsevr vpwlrslaaa reehhedhtd
      301 tegeeteeee eeeaaeeskl segavmpgpq gllgsvahtl qkalqstvsv amwapaavla
      361 magrtlhltp aratsssksr amslsdalkg vtdnvvgtvv hyvplprlsl mepesefrdi
      421 dnppaeterr eaerrgsgap pacpepaprp apprsslrst rgpgaeervd aatlpraafp
      481 amprekptrr vsdsffrpsv mepilgraqy sqlrkks
//
LOCUS       XP_061014678             517 aa            linear   MAM 02-DEC-2023
DEFINITION  perilipin-1 [Dama dama].
ACCESSION   XP_061014678
VERSION     XP_061014678.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158695.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..517
                     /product="perilipin-1"
                     /calculated_mol_wt=55208
     Region          13..415
                     /region_name="Perilipin"
                     /note="Perilipin family; pfam03036"
                     /db_xref="CDD:460784"
     CDS             1..517
                     /gene="PLIN1"
                     /coded_by="XM_061158695.1:254..1807"
                     /db_xref="GeneID:133067783"
ORIGIN      
        1 mavnkgptll dgdlpeqenv lqrvlqlpvv sgtcecfqkt yastkeahpl vasvcnayek
       61 gvqgasslaa wsmepvvrrl stqfvaanel acrgldhlee kipalqyppe kiaselkdti
      121 strlrsarns isvpiastsd kvlgaalagc elawgmardt aeyaantrag rlasggadla
      181 lggvekmvef llppaneesa papglqdaqk ppqakpslms rvgalantls rhtfqttara
      241 lkqgqalamw ipgvaplssl aqwgasaamq vvsrrqsevr vpwlrslaaa reehhedhtd
      301 tegeeteeee eeeaaeeskl segavmpgpq gllgsvahtl qkalqstvsv amwapaavla
      361 magrtlhltp aratsssksr amslsdalkg vtdnvvgtvv hyvplprlsl mepesefrdi
      421 dnppaeterr eaerrgsgap pacpepaprp apprsslrst rgpgaeervd aatlpraafp
      481 amprekptrr vsdsffrpsv mepilgraqy sqlrkks
//
LOCUS       XP_061014680             247 aa            linear   MAM 02-DEC-2023
DEFINITION  peroxisomal membrane protein 11A [Dama dama].
ACCESSION   XP_061014680
VERSION     XP_061014680.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158697.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..247
                     /product="peroxisomal membrane protein 11A"
                     /calculated_mol_wt=28183
     Region          1..238
                     /region_name="PEX11"
                     /note="Peroxisomal biogenesis factor 11 (PEX11);
                     pfam05648"
                     /db_xref="CDD:398979"
     CDS             1..247
                     /gene="PEX11A"
                     /coded_by="XM_061158697.1:84..827"
                     /db_xref="GeneID:133067784"
ORIGIN      
        1 mdafirftnq tqgrdrlfra tqytcmllry llepkadnek vvmklkkles svstgrkwfr
       61 lgnvvhalqa tqqsihatdp vpricltlas lnrviyficd tvlfvrstgl asgvnkekwr
      121 rwaaryyyys lllsllrdly evslqmkqva hdrakreksp sqdplgysva deetewlqsl
      181 llllfhslkr hpplfldtvk nfcdilnpld qlgiyksnpg iiglgglvss vagiitvvyp
      241 qmklktq
//
LOCUS       XP_061014681             965 aa            linear   MAM 02-DEC-2023
DEFINITION  aminopeptidase N [Dama dama].
ACCESSION   XP_061014681
VERSION     XP_061014681.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158698.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..965
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..965
                     /product="aminopeptidase N"
                     /calculated_mol_wt=109155
     Region          81..543
                     /region_name="M1_APN-Q_like"
                     /note="Peptidase M1 aminopeptidase N catalytic domain
                     family which includes aminopeptidase N (APN),
                     aminopeptidase Q (APQ), tricorn interacting factor F3, and
                     endoplasmic reticulum aminopeptidase 1 (ERAP1); cd09601"
                     /db_xref="CDD:341064"
     Site            order(208,210,349..352,385..386,389,408,412,469,474)
                     /site_type="active"
                     /db_xref="CDD:341064"
     Region          618..945
                     /region_name="ERAP1_C"
                     /note="ERAP1-like C-terminal domain; pfam11838"
                     /db_xref="CDD:463368"
     CDS             1..965
                     /gene="ANPEP"
                     /coded_by="XM_061158698.1:61..2958"
                     /db_xref="GeneID:133067785"
ORIGIN      
        1 makgffiska lgilaillgv aavatiials vvyaqeknkn aergtaapts ptgptttsat
       61 tvdqskpwnr yrlpttllpd syrvtlrpyl tpnenglyif tgssavrfic kestdviiih
      121 skklnytsqn ghlvvlkgvg daqapeidrt elvliteylv vhlkssleag kmyemettfq
      181 geladdlagf yrseymdnnv kkvlattqmq stdarksfpc fdepamkatf nitiihpkel
      241 talsnmppkg psvplarepd wnvtefqttp vmstyllayi vseftsvesv epsgvqiriw
      301 arpkatadnh glyalnvtgp ilsffashyn tayplpksdq ialpdfnaga menwglvtyr
      361 enallydpqs ssssnkervv tviahelahq wfgnlvtlaw wndlwlnegf asyveylgad
      421 yaeptwnlkd livpndvyrv mavdalvtsh plttpadevn tpaqisemfd tisyskgasv
      481 irmlsnflte dlfkkglasy lqtfeyqntt ylnlwehlqm avndqssivl pdtvsaimdr
      541 wtlqmgfpvi tvdtntgtis qnhflldpns tvtrpsefny lwivpissir ngqlqehywl
      601 rgeersqsdl fktaadewvl lninvtgyyq vnynennwkk iqnqlmsrpe vipvinraqv
      661 iydsfnlasa rmipvtlaln ntlflnnete ympwqaaiss lnyfklmfdr tevygpmqdy
      721 lrkqiepifl hfeqltknwt eipenlmdqy seinavstac snglskceel aktlfkqwmn
      781 nsqvnpidpn lrstiycnai aqggqeewdf awsqlqqaql vneadklrsa lactnhiwll
      841 nrylsytlnp dlirkqdats titsiasnvi gqslawdfir snwkklfvdy gggsfsfsnl
      901 iqgvtrrfst dfelqqleef kennmdvgfg sgtraleqal ektkanikwv kenkevvlkw
      961 frdhs
//
LOCUS       XP_061014682             388 aa            linear   MAM 02-DEC-2023
DEFINITION  mesoderm posterior protein 2 isoform X1 [Dama dama].
ACCESSION   XP_061014682
VERSION     XP_061014682.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158699.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..388
                     /product="mesoderm posterior protein 2 isoform X1"
                     /calculated_mol_wt=41053
     Region          81..145
                     /region_name="bHLH_TS_Mesp"
                     /note="basic helix-loop-helix (bHLH) domain found in the
                     mesoderm posterior protein (Mesp) family; cd18938"
                     /db_xref="CDD:381508"
     Site            order(82,86,88..90,92,97,117..120)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381508"
     Site            order(95..96,99..100,102..103,121,124,128,130..131,135,
                     137..138)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381508"
     Region          <190..292
                     /region_name="PHA03378"
                     /note="EBNA-3B; Provisional"
                     /db_xref="CDD:223065"
     CDS             1..388
                     /gene="MESP2"
                     /coded_by="XM_061158699.1:539..1705"
                     /db_xref="GeneID:133067786"
ORIGIN      
        1 maqspplqsl lghdhwifpq gwgwvghsds tspassssds sgscpcdrar gpsqpaaaar
       61 saaeaastap nrartrpagg qrqsaserek lrmrtlaral helrrflpps vapagqsltk
      121 ietlrlairy ighlsavlgl seeslqrrrr qrsdaapsrg calcpdggpa eaqrqgccsg
      181 saagaavswg sppvcpeala aperlgsrvp dmgpwltppy cpgmqsppql slgrapdaal
      241 wtppqaccgt qtppeprnqp tpwtsprasl elatvyqvra qalatslgvv prlrletegg
      301 isvspescll petppllprp acqrlqpqtq wgcwshaaev lpnsedqgpg palqlsdesp
      361 pqnsglplsg cpefwqedle gthlgmfy
//
LOCUS       XP_061014683             311 aa            linear   MAM 02-DEC-2023
DEFINITION  mesoderm posterior protein 2 isoform X2 [Dama dama].
ACCESSION   XP_061014683
VERSION     XP_061014683.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158700.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..311
                     /product="mesoderm posterior protein 2 isoform X2"
                     /calculated_mol_wt=33022
     Region          81..145
                     /region_name="bHLH_TS_Mesp"
                     /note="basic helix-loop-helix (bHLH) domain found in the
                     mesoderm posterior protein (Mesp) family; cd18938"
                     /db_xref="CDD:381508"
     Site            order(82,86,88..90,92,97,117..120)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381508"
     Site            order(95..96,99..100,102..103,121,124,128,130..131,135,
                     137..138)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381508"
     CDS             1..311
                     /gene="MESP2"
                     /coded_by="XM_061158700.1:3531..4466"
                     /db_xref="GeneID:133067786"
ORIGIN      
        1 maqspplqsl lghdhwifpq gwgwvghsds tspassssds sgscpcdrar gpsqpaaaar
       61 saaeaastap nrartrpagg qrqsaserek lrmrtlaral helrrflpps vapagqsltk
      121 ietlrlairy ighlsavlgl seeslqrrrr qrsdaapsrg calcpdggpa eaqrqgccsg
      181 saagaavswg sppvcpeala aperlgsrvp dmgpwltppy cpgmqsppql slgrapdaal
      241 wtppqaccgt qtppeprnqp tpwtsprasl elatvyqipg ylilirdgee lkrrdeedrn
      301 llgergwalg s
//
LOCUS       XP_061014684             230 aa            linear   MAM 02-DEC-2023
DEFINITION  AP-3 complex subunit sigma-2 [Dama dama].
ACCESSION   XP_061014684
VERSION     XP_061014684.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158701.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..230
                     /product="AP-3 complex subunit sigma-2"
                     /calculated_mol_wt=25703
     Region          38..183
                     /region_name="AP3_sigma"
                     /note="AP-3 complex subunit sigma; cd14834"
                     /db_xref="CDD:341438"
     Site            order(46..47,52,105..108,131..132,135,140..144)
                     /site_type="other"
                     /note="dileucine motif interface [polypeptide binding]"
                     /db_xref="CDD:341438"
     Site            order(51..54,56..57,82..86,117..122,124..126,129,140,
                     147..149,154..155,158..159,162..173)
                     /site_type="other"
                     /note="putative AP-3 delta interface [polypeptide
                     binding]"
                     /db_xref="CDD:341438"
     Site            order(63,67,71,74,88..90,97)
                     /site_type="other"
                     /note="putative AP-3 mu interface [polypeptide binding]"
                     /db_xref="CDD:341438"
     CDS             1..230
                     /gene="AP3S2"
                     /coded_by="XM_061158701.1:353..1045"
                     /db_xref="GeneID:133067787"
ORIGIN      
        1 mfpgttlssa pagsvlvvae gealwkqtvv kgawqakmiq ailvfnnhgk prlvrfyqrf
       61 peeiqqqivr etfhlvlkrd dnicnflegg sliggsdykl iyrhyatlyf vfcvdssese
      121 lgildliqvf vetldkcfen vceldlifhm dkvhyilqev vmggmvletn mneivaqiea
      181 qnrleksegg lsaaparavs avkninlpem prninigdln ikvpnlsqfv
//
LOCUS       XP_061014685             130 aa            linear   MAM 02-DEC-2023
DEFINITION  arpin isoform X1 [Dama dama].
ACCESSION   XP_061014685
VERSION     XP_061014685.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158702.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..130
                     /product="arpin isoform X1"
                     /calculated_mol_wt=13886
     Region          <1..128
                     /region_name="UPF0552"
                     /note="Arp2/3-interacting proteins Arpin; pfam10574"
                     /db_xref="CDD:463152"
     CDS             1..130
                     /gene="ARPIN"
                     /coded_by="XM_061158702.1:334..726"
                     /db_xref="GeneID:133067788"
ORIGIN      
        1 mssykveakg dsdrltlevl kglvnkpell altdsltpae tvafwmpese meamelelga
       61 gvrlktrgds pfldslakle agtvtkcnfa gdrktgaswt dnimaqkssg vaagetreqg
      121 dgaedeewdd
//
LOCUS       XP_061014686             226 aa            linear   MAM 02-DEC-2023
DEFINITION  arpin isoform X2 [Dama dama].
ACCESSION   XP_061014686
VERSION     XP_061014686.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158703.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..226
                     /product="arpin isoform X2"
                     /calculated_mol_wt=24823
     Region          1..224
                     /region_name="UPF0552"
                     /note="Arp2/3-interacting proteins Arpin; pfam10574"
                     /db_xref="CDD:463152"
     CDS             1..226
                     /gene="ARPIN"
                     /coded_by="XM_061158703.1:145..825"
                     /db_xref="GeneID:133067788"
ORIGIN      
        1 msriyhdsal hnkavrsarl pgawdpaahq rgdgvllege lldvsrhsis dahgrkecyy
       61 vlyirpsrih rrkfdpkgne iepnfsatrk vntgflmssy kveakgdsdr ltlevlkglv
      121 nkpellaltd sltpaetvaf wmpesemeam elelgagvrl ktrgdspfld slakleagtv
      181 tkcnfagdrk tgaswtdnim aqkssgvaag etreqgdgae deewdd
//
LOCUS       XP_061014687             779 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 710 isoform X1 [Dama dama].
ACCESSION   XP_061014687
VERSION     XP_061014687.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158704.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..779
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..779
                     /product="zinc finger protein 710 isoform X1"
                     /calculated_mol_wt=86371
     Region          397..417
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(402,404,406,408..409,412..413,416,430,432,436..437,
                     440..441,444,458,460,462,464..465,468..469,472)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          <421..693
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          425..445
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(425,428,441,445)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          453..473
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          481..501
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          509..529
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          537..557
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          565..585
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(565,568,581,585)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          593..613
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(598,600,602,604..605,608..609,612,626,628,632..633,
                     636..637,640,654,656,658,660..661,664..665,668)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          621..641
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(621,624,637,641)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          649..669
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          677..696
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..779
                     /gene="ZNF710"
                     /coded_by="XM_061158704.1:333..2672"
                     /db_xref="GeneID:133067790"
ORIGIN      
        1 metpsrrrpg gdiassgglr rnsqdyptgv rrgtlncggq panfeaalsv lplytlshlg
       61 slipkegkgv hpvggkeqvl pgesacakal sdallasrrg megfmdsgtq tdavvvlsla
      121 qaavlglvse nelfgatisa eafypdlgpe lagaaigepr ppgpdvyqla cngraleepa
      181 eeevleveaa fekhtrrktr ppvrlvpkvk fekveeeeev yevsvpgsdd kdagpaeaha
      241 eaasggceal vqssavkmid lsvfsrkprt lrhlpraprp eldvtpfdph fpdpardafp
      301 epsmalprpe alpvecnfep phlpplsdpe pptmespepv kpeqgfvwqe agefeadaag
      361 stverhkkaq ldrldinvqi ddsylveagd rqkrwqcrmc eksytskynl vthilghngi
      421 kphscphcsk lfkqpshlqt hllthqgtrp hkcqvcqkaf tqtshlkrhm llhsevkpys
      481 chfcgrgfay pselkahevk hesgrchvcv ecgldfstlt qlkrhlashq gptlyqclec
      541 dksfhyrsql qnhmlkhqnv rpfvctecgm efsqihhlkq hslthkgvke fkcevcgref
      601 tlqanmkrhm lihtsvrpyq chicfktfvq kqtlkthmiv hspvkpfkck vcgksfnrmy
      661 nllghmhlha gskpfkcpyc sskfnlkgnl srhmkvkhgv mdigldsqgg watrrgrsrs
      721 gpvmahsgas cpmrgvgrla rpetslgwaq vwrggspegh qrdndatfmy spkdlrglt
//
LOCUS       XP_061014688             764 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 710 isoform X2 [Dama dama].
ACCESSION   XP_061014688
VERSION     XP_061014688.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158705.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..764
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..764
                     /product="zinc finger protein 710 isoform X2"
                     /calculated_mol_wt=84905
     Region          397..417
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(402,404,406,408..409,412..413,416,430,432,436..437,
                     440..441,444,458,460,462,464..465,468..469,472)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          <421..693
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          425..445
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(425,428,441,445)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          453..473
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          481..501
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          509..529
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          537..557
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          565..585
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(565,568,581,585)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          593..613
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(598,600,602,604..605,608..609,612,626,628,632..633,
                     636..637,640,654,656,658,660..661,664..665,668)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          621..641
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(621,624,637,641)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          649..669
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          677..696
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..764
                     /gene="ZNF710"
                     /coded_by="XM_061158705.1:331..2625"
                     /db_xref="GeneID:133067790"
ORIGIN      
        1 metpsrrrpg gdiassgglr rnsqdyptgv rrgtlncggq panfeaalsv lplytlshlg
       61 slipkegkgv hpvggkeqvl pgesacakal sdallasrrg megfmdsgtq tdavvvlsla
      121 qaavlglvse nelfgatisa eafypdlgpe lagaaigepr ppgpdvyqla cngraleepa
      181 eeevleveaa fekhtrrktr ppvrlvpkvk fekveeeeev yevsvpgsdd kdagpaeaha
      241 eaasggceal vqssavkmid lsvfsrkprt lrhlpraprp eldvtpfdph fpdpardafp
      301 epsmalprpe alpvecnfep phlpplsdpe pptmespepv kpeqgfvwqe agefeadaag
      361 stverhkkaq ldrldinvqi ddsylveagd rqkrwqcrmc eksytskynl vthilghngi
      421 kphscphcsk lfkqpshlqt hllthqgtrp hkcqvcqkaf tqtshlkrhm llhsevkpys
      481 chfcgrgfay pselkahevk hesgrchvcv ecgldfstlt qlkrhlashq gptlyqclec
      541 dksfhyrsql qnhmlkhqnv rpfvctecgm efsqihhlkq hslthkgvke fkcevcgref
      601 tlqanmkrhm lihtsvrpyq chicfktfvq kqtlkthmiv hspvkpfkck vcgksfnrmy
      661 nllghmhlha gskpfkcpyc sskfnlkgnl srhmkvkhgv mdigldsqdp mmeltgtdps
      721 eldsqqemed feenayayag vdgsaeasvl teqamkemay ynvl
//
LOCUS       XP_061014689             708 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 710 isoform X3 [Dama dama].
ACCESSION   XP_061014689
VERSION     XP_061014689.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158706.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..708
                     /product="zinc finger protein 710 isoform X3"
                     /calculated_mol_wt=79181
     Region          326..346
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(331,333,335,337..338,341..342,345,359,361,365..366,
                     369..370,373,387,389,391,393..394,397..398,401)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          <350..622
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          354..374
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(354,357,370,374)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          382..402
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          410..430
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          438..458
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          466..486
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          494..514
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(494,497,510,514)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          522..542
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(527,529,531,533..534,537..538,541,555,557,561..562,
                     565..566,569,583,585,587,589..590,593..594,597)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          550..570
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(550,553,566,570)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          578..598
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          606..625
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..708
                     /gene="ZNF710"
                     /coded_by="XM_061158706.1:16..2142"
                     /db_xref="GeneID:133067790"
ORIGIN      
        1 mctvrgwhcg ytdvfsalsc dallasrrgm egfmdsgtqt davvvlslaq aavlglvsen
       61 elfgatisae afypdlgpel agaaigeprp pgpdvyqlac ngraleepae eevleveaaf
      121 ekhtrrktrp pvrlvpkvkf ekveeeeevy evsvpgsddk dagpaeahae aasggcealv
      181 qssavkmidl svfsrkprtl rhlpraprpe ldvtpfdphf pdpardafpe psmalprpea
      241 lpvecnfepp hlpplsdpep ptmespepvk peqgfvwqea gefeadaags tverhkkaql
      301 drldinvqid dsylveagdr qkrwqcrmce ksytskynlv thilghngik phscphcskl
      361 fkqpshlqth llthqgtrph kcqvcqkaft qtshlkrhml lhsevkpysc hfcgrgfayp
      421 selkahevkh esgrchvcve cgldfstltq lkrhlashqg ptlyqclecd ksfhyrsqlq
      481 nhmlkhqnvr pfvctecgme fsqihhlkqh slthkgvkef kcevcgreft lqanmkrhml
      541 ihtsvrpyqc hicfktfvqk qtlkthmivh spvkpfkckv cgksfnrmyn llghmhlhag
      601 skpfkcpycs skfnlkgnls rhmkvkhgvm digldsqggw atrrgrsrsg pvmahsgasc
      661 pmrgvgrlar petslgwaqv wrggspeghq rdndatfmys pkdlrglt
//
LOCUS       XP_061014690             691 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 710 isoform X4 [Dama dama].
ACCESSION   XP_061014690
VERSION     XP_061014690.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158707.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..691
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..691
                     /product="zinc finger protein 710 isoform X4"
                     /calculated_mol_wt=77309
     Region          309..329
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(314,316,318,320..321,324..325,328,342,344,348..349,
                     352..353,356,370,372,374,376..377,380..381,384)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          <333..605
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          337..357
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(337,340,353,357)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          365..385
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          393..413
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          421..441
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          449..469
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          477..497
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          505..525
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(510,512,514,516..517,520..521,524,538,540,544..545,
                     548..549,552,566,568,570,572..573,576..577,580)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          533..553
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(533,536,549,553)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          561..581
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          589..608
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..691
                     /gene="ZNF710"
                     /coded_by="XM_061158707.1:26..2101"
                     /db_xref="GeneID:133067790"
ORIGIN      
        1 mqsdallasr rgmegfmdsg tqtdavvvls laqaavlglv senelfgati saeafypdlg
       61 pelagaaige prppgpdvyq lacngralee paeeevleve aafekhtrrk trppvrlvpk
      121 vkfekveeee evyevsvpgs ddkdagpaea haeaasggce alvqssavkm idlsvfsrkp
      181 rtlrhlprap rpeldvtpfd phfpdparda fpepsmalpr pealpvecnf epphlpplsd
      241 pepptmespe pvkpeqgfvw qeagefeada agstverhkk aqldrldinv qiddsylvea
      301 gdrqkrwqcr mceksytsky nlvthilghn gikphscphc sklfkqpshl qthllthqgt
      361 rphkcqvcqk aftqtshlkr hmllhsevkp yschfcgrgf aypselkahe vkhesgrchv
      421 cvecgldfst ltqlkrhlas hqgptlyqcl ecdksfhyrs qlqnhmlkhq nvrpfvctec
      481 gmefsqihhl kqhslthkgv kefkcevcgr eftlqanmkr hmlihtsvrp yqchicfktf
      541 vqkqtlkthm ivhspvkpfk ckvcgksfnr mynllghmhl hagskpfkcp ycsskfnlkg
      601 nlsrhmkvkh gvmdigldsq ggwatrrgrs rsgpvmahsg ascpmrgvgr larpetslgw
      661 aqvwrggspe ghqrdndatf myspkdlrgl t
//
LOCUS       XP_061014691             679 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 710 isoform X5 [Dama dama].
ACCESSION   XP_061014691
VERSION     XP_061014691.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158708.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..679
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..679
                     /product="zinc finger protein 710 isoform X5"
                     /calculated_mol_wt=76022
     Region          297..317
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(302,304,306,308..309,312..313,316,330,332,336..337,
                     340..341,344,358,360,362,364..365,368..369,372)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          <321..593
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          325..345
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(325,328,341,345)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          353..373
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          381..401
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          409..429
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          437..457
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          465..485
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          493..513
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(498,500,502,504..505,508..509,512,526,528,532..533,
                     536..537,540,554,556,558,560..561,564..565,568)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          521..541
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(521,524,537,541)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          549..569
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          577..596
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..679
                     /gene="ZNF710"
                     /coded_by="XM_061158708.1:247..2286"
                     /db_xref="GeneID:133067790"
ORIGIN      
        1 megfmdsgtq tdavvvlsla qaavlglvse nelfgatisa eafypdlgpe lagaaigepr
       61 ppgpdvyqla cngraleepa eeevleveaa fekhtrrktr ppvrlvpkvk fekveeeeev
      121 yevsvpgsdd kdagpaeaha eaasggceal vqssavkmid lsvfsrkprt lrhlpraprp
      181 eldvtpfdph fpdpardafp epsmalprpe alpvecnfep phlpplsdpe pptmespepv
      241 kpeqgfvwqe agefeadaag stverhkkaq ldrldinvqi ddsylveagd rqkrwqcrmc
      301 eksytskynl vthilghngi kphscphcsk lfkqpshlqt hllthqgtrp hkcqvcqkaf
      361 tqtshlkrhm llhsevkpys chfcgrgfay pselkahevk hesgrchvcv ecgldfstlt
      421 qlkrhlashq gptlyqclec dksfhyrsql qnhmlkhqnv rpfvctecgm efsqihhlkq
      481 hslthkgvke fkcevcgref tlqanmkrhm lihtsvrpyq chicfktfvq kqtlkthmiv
      541 hspvkpfkck vcgksfnrmy nllghmhlha gskpfkcpyc sskfnlkgnl srhmkvkhgv
      601 mdigldsqgg watrrgrsrs gpvmahsgas cpmrgvgrla rpetslgwaq vwrggspegh
      661 qrdndatfmy spkdlrglt
//
LOCUS       XP_061014692             679 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 710 isoform X5 [Dama dama].
ACCESSION   XP_061014692
VERSION     XP_061014692.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158709.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..679
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..679
                     /product="zinc finger protein 710 isoform X5"
                     /calculated_mol_wt=76022
     Region          297..317
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(302,304,306,308..309,312..313,316,330,332,336..337,
                     340..341,344,358,360,362,364..365,368..369,372)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          <321..593
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          325..345
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(325,328,341,345)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          353..373
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          381..401
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          409..429
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          437..457
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          465..485
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          493..513
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(498,500,502,504..505,508..509,512,526,528,532..533,
                     536..537,540,554,556,558,560..561,564..565,568)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          521..541
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(521,524,537,541)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          549..569
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          577..596
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..679
                     /gene="ZNF710"
                     /coded_by="XM_061158709.1:164..2203"
                     /db_xref="GeneID:133067790"
ORIGIN      
        1 megfmdsgtq tdavvvlsla qaavlglvse nelfgatisa eafypdlgpe lagaaigepr
       61 ppgpdvyqla cngraleepa eeevleveaa fekhtrrktr ppvrlvpkvk fekveeeeev
      121 yevsvpgsdd kdagpaeaha eaasggceal vqssavkmid lsvfsrkprt lrhlpraprp
      181 eldvtpfdph fpdpardafp epsmalprpe alpvecnfep phlpplsdpe pptmespepv
      241 kpeqgfvwqe agefeadaag stverhkkaq ldrldinvqi ddsylveagd rqkrwqcrmc
      301 eksytskynl vthilghngi kphscphcsk lfkqpshlqt hllthqgtrp hkcqvcqkaf
      361 tqtshlkrhm llhsevkpys chfcgrgfay pselkahevk hesgrchvcv ecgldfstlt
      421 qlkrhlashq gptlyqclec dksfhyrsql qnhmlkhqnv rpfvctecgm efsqihhlkq
      481 hslthkgvke fkcevcgref tlqanmkrhm lihtsvrpyq chicfktfvq kqtlkthmiv
      541 hspvkpfkck vcgksfnrmy nllghmhlha gskpfkcpyc sskfnlkgnl srhmkvkhgv
      601 mdigldsqgg watrrgrsrs gpvmahsgas cpmrgvgrla rpetslgwaq vwrggspegh
      661 qrdndatfmy spkdlrglt
//
LOCUS       XP_061014693             679 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 710 isoform X5 [Dama dama].
ACCESSION   XP_061014693
VERSION     XP_061014693.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158710.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..679
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..679
                     /product="zinc finger protein 710 isoform X5"
                     /calculated_mol_wt=76022
     Region          297..317
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(302,304,306,308..309,312..313,316,330,332,336..337,
                     340..341,344,358,360,362,364..365,368..369,372)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          <321..593
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          325..345
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(325,328,341,345)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          353..373
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          381..401
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          409..429
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          437..457
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          465..485
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          493..513
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(498,500,502,504..505,508..509,512,526,528,532..533,
                     536..537,540,554,556,558,560..561,564..565,568)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          521..541
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(521,524,537,541)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          549..569
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          577..596
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..679
                     /gene="ZNF710"
                     /coded_by="XM_061158710.1:116..2155"
                     /db_xref="GeneID:133067790"
ORIGIN      
        1 megfmdsgtq tdavvvlsla qaavlglvse nelfgatisa eafypdlgpe lagaaigepr
       61 ppgpdvyqla cngraleepa eeevleveaa fekhtrrktr ppvrlvpkvk fekveeeeev
      121 yevsvpgsdd kdagpaeaha eaasggceal vqssavkmid lsvfsrkprt lrhlpraprp
      181 eldvtpfdph fpdpardafp epsmalprpe alpvecnfep phlpplsdpe pptmespepv
      241 kpeqgfvwqe agefeadaag stverhkkaq ldrldinvqi ddsylveagd rqkrwqcrmc
      301 eksytskynl vthilghngi kphscphcsk lfkqpshlqt hllthqgtrp hkcqvcqkaf
      361 tqtshlkrhm llhsevkpys chfcgrgfay pselkahevk hesgrchvcv ecgldfstlt
      421 qlkrhlashq gptlyqclec dksfhyrsql qnhmlkhqnv rpfvctecgm efsqihhlkq
      481 hslthkgvke fkcevcgref tlqanmkrhm lihtsvrpyq chicfktfvq kqtlkthmiv
      541 hspvkpfkck vcgksfnrmy nllghmhlha gskpfkcpyc sskfnlkgnl srhmkvkhgv
      601 mdigldsqgg watrrgrsrs gpvmahsgas cpmrgvgrla rpetslgwaq vwrggspegh
      661 qrdndatfmy spkdlrglt
//
LOCUS       XP_061014694             679 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 710 isoform X5 [Dama dama].
ACCESSION   XP_061014694
VERSION     XP_061014694.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158711.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..679
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..679
                     /product="zinc finger protein 710 isoform X5"
                     /calculated_mol_wt=76022
     Region          297..317
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(302,304,306,308..309,312..313,316,330,332,336..337,
                     340..341,344,358,360,362,364..365,368..369,372)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          <321..593
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          325..345
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(325,328,341,345)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          353..373
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          381..401
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          409..429
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          437..457
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          465..485
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          493..513
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(498,500,502,504..505,508..509,512,526,528,532..533,
                     536..537,540,554,556,558,560..561,564..565,568)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          521..541
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(521,524,537,541)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          549..569
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          577..596
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..679
                     /gene="ZNF710"
                     /coded_by="XM_061158711.1:146..2185"
                     /db_xref="GeneID:133067790"
ORIGIN      
        1 megfmdsgtq tdavvvlsla qaavlglvse nelfgatisa eafypdlgpe lagaaigepr
       61 ppgpdvyqla cngraleepa eeevleveaa fekhtrrktr ppvrlvpkvk fekveeeeev
      121 yevsvpgsdd kdagpaeaha eaasggceal vqssavkmid lsvfsrkprt lrhlpraprp
      181 eldvtpfdph fpdpardafp epsmalprpe alpvecnfep phlpplsdpe pptmespepv
      241 kpeqgfvwqe agefeadaag stverhkkaq ldrldinvqi ddsylveagd rqkrwqcrmc
      301 eksytskynl vthilghngi kphscphcsk lfkqpshlqt hllthqgtrp hkcqvcqkaf
      361 tqtshlkrhm llhsevkpys chfcgrgfay pselkahevk hesgrchvcv ecgldfstlt
      421 qlkrhlashq gptlyqclec dksfhyrsql qnhmlkhqnv rpfvctecgm efsqihhlkq
      481 hslthkgvke fkcevcgref tlqanmkrhm lihtsvrpyq chicfktfvq kqtlkthmiv
      541 hspvkpfkck vcgksfnrmy nllghmhlha gskpfkcpyc sskfnlkgnl srhmkvkhgv
      601 mdigldsqgg watrrgrsrs gpvmahsgas cpmrgvgrla rpetslgwaq vwrggspegh
      661 qrdndatfmy spkdlrglt
//
LOCUS       XP_061014695             452 aa            linear   MAM 02-DEC-2023
DEFINITION  isocitrate dehydrogenase [NADP], mitochondrial [Dama dama].
ACCESSION   XP_061014695
VERSION     XP_061014695.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158712.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..452
                     /product="isocitrate dehydrogenase [NADP], mitochondrial"
                     /calculated_mol_wt=50580
     Region          39..451
                     /region_name="PTZ00435"
                     /note="isocitrate dehydrogenase; Provisional"
                     /db_xref="CDD:240417"
     CDS             1..452
                     /gene="IDH2"
                     /coded_by="XM_061158712.1:121..1479"
                     /db_xref="GeneID:133067791"
ORIGIN      
        1 magylrvvrs lcrasgsgsa wapaaltapn lqeqprrhya dkrikvakpv vemdgdemtr
       61 iiwqfikekl ilphvdvqlk yfdlglpnrd qtndqvtids alatqkysva vkcatitpde
      121 arveefklkk mwkspngtir nilggtvfre piickniprl vpgwtkpiti grhahgdqyk
      181 atdfvvdrag tfkvvftpkd gsgpkewevy nfpaggvgmg myntdesisg fahscfqyai
      241 qkkwplymst kntilkaydg rfkdifqaif ekhyktefdk hkiwyehrli ddmvaqvlks
      301 sggfvwackn ydgdvqsdil aqgfgslglm tsvlvcpdgk tieaeaahgt vtrhyrehqk
      361 grptstnpia sifawtrgle hrgkldgnqd lirfaqtlek vcvetvesga mtkdlagcih
      421 glsnvklneh flntsdfldt iksnldkalg qq
//
LOCUS       XP_061014696             821 aa            linear   MAM 02-DEC-2023
DEFINITION  semaphorin-4B [Dama dama].
ACCESSION   XP_061014696
VERSION     XP_061014696.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158713.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..821
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..821
                     /product="semaphorin-4B"
                     /calculated_mol_wt=90218
     Region          50..513
                     /region_name="Sema"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorins and plexins; cl15693"
                     /db_xref="CDD:472829"
     Region          514..560
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     Region          581..663
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          594..598
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          606..610
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          628..631
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          641..646
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          658..661
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..821
                     /gene="SEMA4B"
                     /coded_by="XM_061158713.1:305..2770"
                     /db_xref="GeneID:133067794"
ORIGIN      
        1 mgrgsraaap lgalppllll llpllppsps raltprislp lgsekrpflk feaenifnyt
       61 alllskdgrt vyvgareall alnssvsflp ggeyqelpwp adaerkqqcs fkgkdperdc
      121 qnyikillpl nsshliacgt eafspactyi dvenftlvqd krgnilledg kgrcpfdpnf
      181 kstalvvdge lytatassfl gndptisrsq slrpiksess lnwlrdpafm asahipeslg
      241 ssegdddkiy fffsetgqel effentvvsr iarickgdeg ggrvlqqrwt sflkaqlvcl
      301 rpddgfpfnv lqdvftltpr pedwldtlfy gvftsqwngg ttegsavcaf tmkdvqstfn
      361 gffkevnret qqwytvthpv psprpgacit nsarerkins slqlpdrvln flkdhflmdg
      421 qvrsrmlllq pqahyqrvtv hrvpalnrty dvlflgsgdg wvhkavsvgt tmhiieelqv
      481 fpagqpvqhl lldadrglly aasqssvvkv pvancslyqs cgdcllardp ycawngsrca
      541 sitlyqpeva srpwiqdidg gnatnlcgps karasvpkge kpceqvhfqp htvntlacpl
      601 lsnlatrlwl hngapinasa scrvlatgdl llvgsqqelg lfqcwslegg ikqleasycp
      661 kvvdevtgga grsgsvpvii ntsrvsagsk aswgtdksyw teflvmcalf vfamvllilf
      721 flyrhrggmk vflkqgecas vhpktrpvvl ppetrplngm sppntlldqg yqalldsspg
      781 triftesekr plsvqdsfve vspvcprprv rlgsvirdsv v
//
LOCUS       XP_061014697             385 aa            linear   MAM 02-DEC-2023
DEFINITION  GDP-D-glucose phosphorylase 1 [Dama dama].
ACCESSION   XP_061014697
VERSION     XP_061014697.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158714.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..385
                     /product="GDP-D-glucose phosphorylase 1"
                     /calculated_mol_wt=42105
     Region          54..383
                     /region_name="PLN03103"
                     /note="GDP-L-galactose-hexose-1-phosphate
                     guanyltransferase; Provisional"
                     /db_xref="CDD:215577"
     CDS             1..385
                     /gene="GDPGP1"
                     /coded_by="XM_061158714.1:205..1362"
                     /db_xref="GeneID:133067795"
ORIGIN      
        1 maiprasnet syllppnked weghgipdfv ygqeelvmeg vqwprgalsl lntpplshfd
       61 salcsawrqr melglfrypl galptqtlpg tvgfvaqlnv ergvqrrrph niksmrqefd
      121 peqfnfnqir pgevlfrlhg krdcpgtvqq edilvvinvs plewghvllv peparglpqr
      181 llpgalragv eavllsshpg frvgfnslgg lasvnhlhlh gyylahrlpv egapsepldp
      241 rgrlhvlqal papgflfyts rpgpdlealv srvcratdyl tdcdiahnlf vtrgappgkt
      301 sfssalsgvr vilwprkpsf gikegeafnv alcelaghlp vktaqdfssl teaaalalir
      361 ecllppaqae dvraalvali gqeeq
//
LOCUS       XP_061014700             287 aa            linear   MAM 02-DEC-2023
DEFINITION  neugrin [Dama dama].
ACCESSION   XP_061014700
VERSION     XP_061014700.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158717.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..287
                     /product="neugrin"
                     /calculated_mol_wt=31827
     Region          73..287
                     /region_name="Neugrin"
                     /note="pfam06413"
                     /db_xref="CDD:428925"
     CDS             1..287
                     /gene="NGRN"
                     /coded_by="XM_061158717.1:81..944"
                     /db_xref="GeneID:133067797"
ORIGIN      
        1 maftlkvfrg grvraavarc gfatrgvtip gpisrepdpd fdwepeerel qevestlkrq
       61 kkairfqkir rqmeasgapp rtltweameq irylhrefae swsvprlaeg fdvstdvirr
      121 vlkskfvptl eqklkqdqkv rkkiglgrll pelpgpgdss kplsaglsvs gsllmpgdea
      181 sskgdghsta lkvielntqs tniptrqker nkgvqgleee knfvpvaagh ltgtcrgtrg
      241 idsdglpsdk kleelkagea gdqifsnrvv qrgreffdsn gnflyri
//
LOCUS       XP_061014701             191 aa            linear   MAM 02-DEC-2023
DEFINITION  calcium and integrin-binding protein 1 [Dama dama].
ACCESSION   XP_061014701
VERSION     XP_061014701.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158718.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..191
                     /product="calcium and integrin-binding protein 1"
                     /calculated_mol_wt=21588
     Region          82..132
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cl08302"
                     /db_xref="CDD:415501"
     Region          111..178
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cd00051"
                     /db_xref="CDD:238008"
     Site            order(116,118,120,127,161,163,165,172)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238008"
     CDS             1..191
                     /gene="CIB1"
                     /coded_by="XM_061158718.1:118..693"
                     /db_xref="GeneID:133067798"
ORIGIN      
        1 mggsgsrlsk ellaeyqdlt fltkqeilla hrrfcellpq eqrsveeslq arvsleqils
       61 lpelkanpfk erickvfsts psrdslsfed fldllsvfsd tatpdikshy afrifdfddd
      121 gtlnredlsq lvncltgese dtrlsasemk qlidnilees didrdgtinl sefqhvisrs
      181 pdfassfkiv l
//
LOCUS       XP_061014702              92 aa            linear   MAM 02-DEC-2023
DEFINITION  protein S100-B [Dama dama].
ACCESSION   XP_061014702
VERSION     XP_061014702.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158719.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..92
                     /product="protein S100-B"
                     /calculated_mol_wt=10539
     Region          2..89
                     /region_name="S-100B"
                     /note="S-100B domain found in proteins similar to S100B.
                     S100B is a calcium-binding protein belonging to a large
                     S100 vertebrate-specific protein family within the EF-hand
                     superfamily of calcium-binding proteins. Note that the
                     S-100 hierarchy, to which this...; cd05027"
                     /db_xref="CDD:240154"
     Site            order(2..5,7..19,26,36,39..41,71..72,74..75,78..80,82..83,
                     87..89)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:240154"
     Site            order(19,22,24,27,32,62,64,66,68,73)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:240154"
     Site            order(43..48,50,52..53,56..57,80..81,84..85,87..88)
                     /site_type="other"
                     /note="NDR kinase binding site [polypeptide binding]"
                     /db_xref="CDD:240154"
     Site            order(47,49,53,56..57,60,72,77,80..81,84..85,87..88)
                     /site_type="active"
                     /note="TRTK-12 binding site [active]"
                     /db_xref="CDD:240154"
     CDS             1..92
                     /gene="LOC133067799"
                     /coded_by="XM_061158719.1:238..516"
                     /db_xref="GeneID:133067799"
ORIGIN      
        1 mselekamma lievfhqysg kegdkrklkk selkelinne lthfleeike qeavdkvmet
       61 ldsdgdgecd fqefmafiam itaachefft qe
//
LOCUS       XP_061014703              92 aa            linear   MAM 02-DEC-2023
DEFINITION  protein S100-B [Dama dama].
ACCESSION   XP_061014703
VERSION     XP_061014703.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158720.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..92
                     /product="protein S100-B"
                     /calculated_mol_wt=10539
     Region          2..89
                     /region_name="S-100B"
                     /note="S-100B domain found in proteins similar to S100B.
                     S100B is a calcium-binding protein belonging to a large
                     S100 vertebrate-specific protein family within the EF-hand
                     superfamily of calcium-binding proteins. Note that the
                     S-100 hierarchy, to which this...; cd05027"
                     /db_xref="CDD:240154"
     Site            order(2..5,7..19,26,36,39..41,71..72,74..75,78..80,82..83,
                     87..89)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:240154"
     Site            order(19,22,24,27,32,62,64,66,68,73)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:240154"
     Site            order(43..48,50,52..53,56..57,80..81,84..85,87..88)
                     /site_type="other"
                     /note="NDR kinase binding site [polypeptide binding]"
                     /db_xref="CDD:240154"
     Site            order(47,49,53,56..57,60,72,77,80..81,84..85,87..88)
                     /site_type="active"
                     /note="TRTK-12 binding site [active]"
                     /db_xref="CDD:240154"
     CDS             1..92
                     /gene="LOC133067799"
                     /coded_by="XM_061158720.1:219..497"
                     /db_xref="GeneID:133067799"
ORIGIN      
        1 mselekamma lievfhqysg kegdkrklkk selkelinne lthfleeike qeavdkvmet
       61 ldsdgdgecd fqefmafiam itaachefft qe
//
LOCUS       XP_061014704             618 aa            linear   MAM 02-DEC-2023
DEFINITION  vacuolar protein sorting-associated protein 33B isoform X1 [Dama
            dama].
ACCESSION   XP_061014704
VERSION     XP_061014704.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158721.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..618
                     /product="vacuolar protein sorting-associated protein 33B
                     isoform X1"
                     /calculated_mol_wt=70611
     Region          37..611
                     /region_name="Sec1"
                     /note="Sec1 family; pfam00995"
                     /db_xref="CDD:460020"
     CDS             1..618
                     /gene="VPS33B"
                     /coded_by="XM_061158721.1:825..2681"
                     /db_xref="GeneID:133067800"
ORIGIN      
        1 mafphrpdap elpdfsmlkr lardqliyll eqlpgkkdlf ieadlmspld rianvsilkq
       61 hevdklykve kkpalssseq lcflvrprik nmryiaslvn adkvagrtrk ykvifspqkf
      121 yacemvleee gvygdvscde wafsllpldv dllsmelpef frdyflegdq rwintlaqal
      181 hllstlygpf pncygigrca kqmsyelwkr leeeedgetk grrpeighif lldrdmdfvt
      241 alcsqvvyeg lvddtfrikc gsvdfgpevt ssdkslkvll naedkvfnei rnehfsnvfg
      301 flsqkarnlq aqydrrrgmd ikqmknfvsq elkglkqehr llslhigace simkkktkqd
      361 fqelikteha llegfnires tnyieehidr qvspieslrl mcllsiteng lipkdyrslk
      421 tqylqsygpe hlltfsnlrr agllteqapg dtltaveskv sklvtdkaag kitdafssla
      481 krsnfraisk klnliprvdg eydlkvprdm ayvfsgayvp lscriieqvl errgwqglde
      541 vvrllncsel aftdmtkddk asseslrlil vvflggctfs eisalrflgr ekgyrfiflt
      601 tavtnsarlm eamsevka
//
LOCUS       XP_061014705             617 aa            linear   MAM 02-DEC-2023
DEFINITION  vacuolar protein sorting-associated protein 33B isoform X2 [Dama
            dama].
ACCESSION   XP_061014705
VERSION     XP_061014705.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158722.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..617
                     /product="vacuolar protein sorting-associated protein 33B
                     isoform X2"
                     /calculated_mol_wt=70483
     Region          37..610
                     /region_name="Sec1"
                     /note="Sec1 family; pfam00995"
                     /db_xref="CDD:460020"
     CDS             1..617
                     /gene="VPS33B"
                     /coded_by="XM_061158722.1:821..2674"
                     /db_xref="GeneID:133067800"
ORIGIN      
        1 mafphrpdap elpdfsmlkr lardqliyll eqlpgkkdlf ieadlmspld rianvsilkq
       61 hevdklykve kkpalssseq lcflvrprik nmryiaslvn adkvagrtrk ykvifspqkf
      121 yacemvleee gvygdvscde wafsllpldv dllsmelpef frdyflegdq rwintlaqal
      181 hllstlygpf pncygigrca kmsyelwkrl eeeedgetkg rrpeighifl ldrdmdfvta
      241 lcsqvvyegl vddtfrikcg svdfgpevts sdkslkvlln aedkvfneir nehfsnvfgf
      301 lsqkarnlqa qydrrrgmdi kqmknfvsqe lkglkqehrl lslhigaces imkkktkqdf
      361 qeliktehal legfnirest nyieehidrq vspieslrlm cllsitengl ipkdyrslkt
      421 qylqsygpeh lltfsnlrra gllteqapgd tltaveskvs klvtdkaagk itdafsslak
      481 rsnfraiskk lnliprvdge ydlkvprdma yvfsgayvpl scriieqvle rrgwqgldev
      541 vrllncsela ftdmtkddka sseslrlilv vflggctfse isalrflgre kgyrfifltt
      601 avtnsarlme amsevka
//
LOCUS       XP_061014706             643 aa            linear   MAM 02-DEC-2023
DEFINITION  protein regulator of cytokinesis 1 isoform X1 [Dama dama].
ACCESSION   XP_061014706
VERSION     XP_061014706.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158723.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..643
                     /product="protein regulator of cytokinesis 1 isoform X1"
                     /calculated_mol_wt=74236
     Region          16..477
                     /region_name="MAP65_ASE1"
                     /note="Microtubule associated protein (MAP65/ASE1 family);
                     pfam03999"
                     /db_xref="CDD:427641"
     CDS             1..643
                     /gene="PRC1"
                     /coded_by="XM_061158723.1:135..2066"
                     /db_xref="GeneID:133067801"
ORIGIN      
        1 mrrsevlaee silclqkaln hlreiwelig ipedqrlqrt evvkkhikdl ldmmiaeees
       61 lkerliksia vcqkelntlc selnvepfhe egettilqle kdlrtqvelr rkqkkerkqe
      121 lkilqeqdqe lceilcmphy eidstsvpsl eelnqfrqhv atlretkasr reefvnikrq
      181 iilcmeeleh tpdtsferdv vcedeeafcl sleniatlqk llrqlevrka qneavceglr
      241 aqirelwdrl qipaeereav atvmtgskak vrkalqlevd rleelkmqnm kkvieairve
      301 vaqhwdkcfy sqeqrrafaa yysedytenl lqlhdaeivr lrnyyevhke lfegvqkwee
      361 swrlflefer kasdpsrftn rggnllkeek qraklqktlp kleeelkari emweqehska
      421 fvvngqkfme yvteqwemhr lekerakqer qlknkkqtet emlygstprt pnkrrglaps
      481 tpgkvrklnt ttmsnatans sirpvfsgtv yrspvsrlpp sgskpvitst csgkktprav
      541 khgankenle lngsilsggy pdsapprrnf sinsvastys efakdpslsd sstvglqgcs
      601 lnatasvall spkglspphr tafllmkmsv cqklgwpdsl pkr
//
LOCUS       XP_061014707             642 aa            linear   MAM 02-DEC-2023
DEFINITION  protein regulator of cytokinesis 1 isoform X2 [Dama dama].
ACCESSION   XP_061014707
VERSION     XP_061014707.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158724.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..642
                     /product="protein regulator of cytokinesis 1 isoform X2"
                     /calculated_mol_wt=74108
     Region          16..477
                     /region_name="MAP65_ASE1"
                     /note="Microtubule associated protein (MAP65/ASE1 family);
                     pfam03999"
                     /db_xref="CDD:427641"
     CDS             1..642
                     /gene="PRC1"
                     /coded_by="XM_061158724.1:135..2063"
                     /db_xref="GeneID:133067801"
ORIGIN      
        1 mrrsevlaee silclqkaln hlreiwelig ipedqrlqrt evvkkhikdl ldmmiaeees
       61 lkerliksia vcqkelntlc selnvepfhe egettilqle kdlrtqvelr rkqkkerkqe
      121 lkilqeqdqe lceilcmphy eidstsvpsl eelnqfrqhv atlretkasr reefvnikrq
      181 iilcmeeleh tpdtsferdv vcedeeafcl sleniatlqk llrqlevrka qneavceglr
      241 aqirelwdrl qipaeereav atvmtgskak vrkalqlevd rleelkmqnm kkvieairve
      301 vaqhwdkcfy sqeqrrafaa yysedytenl lqlhdaeivr lrnyyevhke lfegvqkwee
      361 swrlflefer kasdpsrftn rggnllkeek qraklqktlp kleeelkari emweqehska
      421 fvvngqkfme yvteqwemhr lekerakqer qlknkkqtet emlygstprt pnkrrglaps
      481 tpgkvrklnt ttmsnatans sirpvfsgtv yrspvsrlpp sgskpvitst csgkktprav
      541 khgankenle lngsilsggy pdsapprrnf sinsvastys efadpslsds stvglqgcsl
      601 natasvalls pkglspphrt afllmkmsvc qklgwpdslp kr
//
LOCUS       XP_061014708             629 aa            linear   MAM 02-DEC-2023
DEFINITION  protein regulator of cytokinesis 1 isoform X3 [Dama dama].
ACCESSION   XP_061014708
VERSION     XP_061014708.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158725.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..629
                     /product="protein regulator of cytokinesis 1 isoform X3"
                     /calculated_mol_wt=72821
     Region          16..477
                     /region_name="MAP65_ASE1"
                     /note="Microtubule associated protein (MAP65/ASE1 family);
                     pfam03999"
                     /db_xref="CDD:427641"
     CDS             1..629
                     /gene="PRC1"
                     /coded_by="XM_061158725.1:135..2024"
                     /db_xref="GeneID:133067801"
ORIGIN      
        1 mrrsevlaee silclqkaln hlreiwelig ipedqrlqrt evvkkhikdl ldmmiaeees
       61 lkerliksia vcqkelntlc selnvepfhe egettilqle kdlrtqvelr rkqkkerkqe
      121 lkilqeqdqe lceilcmphy eidstsvpsl eelnqfrqhv atlretkasr reefvnikrq
      181 iilcmeeleh tpdtsferdv vcedeeafcl sleniatlqk llrqlevrka qneavceglr
      241 aqirelwdrl qipaeereav atvmtgskak vrkalqlevd rleelkmqnm kkvieairve
      301 vaqhwdkcfy sqeqrrafaa yysedytenl lqlhdaeivr lrnyyevhke lfegvqkwee
      361 swrlflefer kasdpsrftn rggnllkeek qraklqktlp kleeelkari emweqehska
      421 fvvngqkfme yvteqwemhr lekerakqer qlknkkqtet emlygstprt pnkrrglaps
      481 tpgkvrklnt ttmsnatans sirpvfsgtv yrspvsrlpp sgskpvitst csgkktprav
      541 khgankenle lngsilsggy pdsapprrnf sinsvastys efagcslnat asvallspkg
      601 lspphrtafl lmkmsvcqkl gwpdslpkr
//
LOCUS       XP_061014709             620 aa            linear   MAM 02-DEC-2023
DEFINITION  protein regulator of cytokinesis 1 isoform X4 [Dama dama].
ACCESSION   XP_061014709
VERSION     XP_061014709.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158726.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..620
                     /product="protein regulator of cytokinesis 1 isoform X4"
                     /calculated_mol_wt=71804
     Region          16..477
                     /region_name="MAP65_ASE1"
                     /note="Microtubule associated protein (MAP65/ASE1 family);
                     pfam03999"
                     /db_xref="CDD:427641"
     CDS             1..620
                     /gene="PRC1"
                     /coded_by="XM_061158726.1:135..1997"
                     /db_xref="GeneID:133067801"
ORIGIN      
        1 mrrsevlaee silclqkaln hlreiwelig ipedqrlqrt evvkkhikdl ldmmiaeees
       61 lkerliksia vcqkelntlc selnvepfhe egettilqle kdlrtqvelr rkqkkerkqe
      121 lkilqeqdqe lceilcmphy eidstsvpsl eelnqfrqhv atlretkasr reefvnikrq
      181 iilcmeeleh tpdtsferdv vcedeeafcl sleniatlqk llrqlevrka qneavceglr
      241 aqirelwdrl qipaeereav atvmtgskak vrkalqlevd rleelkmqnm kkvieairve
      301 vaqhwdkcfy sqeqrrafaa yysedytenl lqlhdaeivr lrnyyevhke lfegvqkwee
      361 swrlflefer kasdpsrftn rggnllkeek qraklqktlp kleeelkari emweqehska
      421 fvvngqkfme yvteqwemhr lekerakqer qlknkkqtet emlygstprt pnkrrglaps
      481 tpgkvrklnt ttmsnatans sirpvfsgtv yrspvsrlpp sgskpvitst csgkktprav
      541 khgankenle lngsilsggy pdsapprrnf sinsvastys efakdpslsd sstvglqrel
      601 skasksdaas rilnstniqs
//
LOCUS       XP_061014710             619 aa            linear   MAM 02-DEC-2023
DEFINITION  protein regulator of cytokinesis 1 isoform X5 [Dama dama].
ACCESSION   XP_061014710
VERSION     XP_061014710.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158727.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..619
                     /product="protein regulator of cytokinesis 1 isoform X5"
                     /calculated_mol_wt=71676
     Region          16..477
                     /region_name="MAP65_ASE1"
                     /note="Microtubule associated protein (MAP65/ASE1 family);
                     pfam03999"
                     /db_xref="CDD:427641"
     CDS             1..619
                     /gene="PRC1"
                     /coded_by="XM_061158727.1:135..1994"
                     /db_xref="GeneID:133067801"
ORIGIN      
        1 mrrsevlaee silclqkaln hlreiwelig ipedqrlqrt evvkkhikdl ldmmiaeees
       61 lkerliksia vcqkelntlc selnvepfhe egettilqle kdlrtqvelr rkqkkerkqe
      121 lkilqeqdqe lceilcmphy eidstsvpsl eelnqfrqhv atlretkasr reefvnikrq
      181 iilcmeeleh tpdtsferdv vcedeeafcl sleniatlqk llrqlevrka qneavceglr
      241 aqirelwdrl qipaeereav atvmtgskak vrkalqlevd rleelkmqnm kkvieairve
      301 vaqhwdkcfy sqeqrrafaa yysedytenl lqlhdaeivr lrnyyevhke lfegvqkwee
      361 swrlflefer kasdpsrftn rggnllkeek qraklqktlp kleeelkari emweqehska
      421 fvvngqkfme yvteqwemhr lekerakqer qlknkkqtet emlygstprt pnkrrglaps
      481 tpgkvrklnt ttmsnatans sirpvfsgtv yrspvsrlpp sgskpvitst csgkktprav
      541 khgankenle lngsilsggy pdsapprrnf sinsvastys efadpslsds stvglqrels
      601 kasksdaasr ilnstniqs
//
LOCUS       XP_061014711             614 aa            linear   MAM 02-DEC-2023
DEFINITION  protein regulator of cytokinesis 1 isoform X6 [Dama dama].
ACCESSION   XP_061014711
VERSION     XP_061014711.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158728.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..614
                     /product="protein regulator of cytokinesis 1 isoform X6"
                     /calculated_mol_wt=71094
     Region          16..477
                     /region_name="MAP65_ASE1"
                     /note="Microtubule associated protein (MAP65/ASE1 family);
                     pfam03999"
                     /db_xref="CDD:427641"
     CDS             1..614
                     /gene="PRC1"
                     /coded_by="XM_061158728.1:135..1979"
                     /db_xref="GeneID:133067801"
ORIGIN      
        1 mrrsevlaee silclqkaln hlreiwelig ipedqrlqrt evvkkhikdl ldmmiaeees
       61 lkerliksia vcqkelntlc selnvepfhe egettilqle kdlrtqvelr rkqkkerkqe
      121 lkilqeqdqe lceilcmphy eidstsvpsl eelnqfrqhv atlretkasr reefvnikrq
      181 iilcmeeleh tpdtsferdv vcedeeafcl sleniatlqk llrqlevrka qneavceglr
      241 aqirelwdrl qipaeereav atvmtgskak vrkalqlevd rleelkmqnm kkvieairve
      301 vaqhwdkcfy sqeqrrafaa yysedytenl lqlhdaeivr lrnyyevhke lfegvqkwee
      361 swrlflefer kasdpsrftn rggnllkeek qraklqktlp kleeelkari emweqehska
      421 fvvngqkfme yvteqwemhr lekerakqer qlknkkqtet emlygstprt pnkrrglaps
      481 tpgkvrklnt ttmsnatans sirpvfsgtv yrspvsrlpp sgskpvitst csgkktprav
      541 khgankenle lngsilsggy pdsapprrnf sinsvastys efakdpslsd sstvglqdsl
      601 ptdedvcvse vgma
//
LOCUS       XP_061014712             606 aa            linear   MAM 02-DEC-2023
DEFINITION  protein regulator of cytokinesis 1 isoform X7 [Dama dama].
ACCESSION   XP_061014712
VERSION     XP_061014712.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158729.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..606
                     /product="protein regulator of cytokinesis 1 isoform X7"
                     /calculated_mol_wt=70389
     Region          16..477
                     /region_name="MAP65_ASE1"
                     /note="Microtubule associated protein (MAP65/ASE1 family);
                     pfam03999"
                     /db_xref="CDD:427641"
     CDS             1..606
                     /gene="PRC1"
                     /coded_by="XM_061158729.1:135..1955"
                     /db_xref="GeneID:133067801"
ORIGIN      
        1 mrrsevlaee silclqkaln hlreiwelig ipedqrlqrt evvkkhikdl ldmmiaeees
       61 lkerliksia vcqkelntlc selnvepfhe egettilqle kdlrtqvelr rkqkkerkqe
      121 lkilqeqdqe lceilcmphy eidstsvpsl eelnqfrqhv atlretkasr reefvnikrq
      181 iilcmeeleh tpdtsferdv vcedeeafcl sleniatlqk llrqlevrka qneavceglr
      241 aqirelwdrl qipaeereav atvmtgskak vrkalqlevd rleelkmqnm kkvieairve
      301 vaqhwdkcfy sqeqrrafaa yysedytenl lqlhdaeivr lrnyyevhke lfegvqkwee
      361 swrlflefer kasdpsrftn rggnllkeek qraklqktlp kleeelkari emweqehska
      421 fvvngqkfme yvteqwemhr lekerakqer qlknkkqtet emlygstprt pnkrrglaps
      481 tpgkvrklnt ttmsnatans sirpvfsgtv yrspvsrlpp sgskpvitst csgkktprav
      541 khgankenle lngsilsggy pdsapprrnf sinsvastys efarelskas ksdaasriln
      601 stniqs
//
LOCUS       XP_061014714             600 aa            linear   MAM 02-DEC-2023
DEFINITION  protein regulator of cytokinesis 1 isoform X8 [Dama dama].
ACCESSION   XP_061014714
VERSION     XP_061014714.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158731.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..600
                     /product="protein regulator of cytokinesis 1 isoform X8"
                     /calculated_mol_wt=69679
     Region          16..477
                     /region_name="MAP65_ASE1"
                     /note="Microtubule associated protein (MAP65/ASE1 family);
                     pfam03999"
                     /db_xref="CDD:427641"
     CDS             1..600
                     /gene="PRC1"
                     /coded_by="XM_061158731.1:135..1937"
                     /db_xref="GeneID:133067801"
ORIGIN      
        1 mrrsevlaee silclqkaln hlreiwelig ipedqrlqrt evvkkhikdl ldmmiaeees
       61 lkerliksia vcqkelntlc selnvepfhe egettilqle kdlrtqvelr rkqkkerkqe
      121 lkilqeqdqe lceilcmphy eidstsvpsl eelnqfrqhv atlretkasr reefvnikrq
      181 iilcmeeleh tpdtsferdv vcedeeafcl sleniatlqk llrqlevrka qneavceglr
      241 aqirelwdrl qipaeereav atvmtgskak vrkalqlevd rleelkmqnm kkvieairve
      301 vaqhwdkcfy sqeqrrafaa yysedytenl lqlhdaeivr lrnyyevhke lfegvqkwee
      361 swrlflefer kasdpsrftn rggnllkeek qraklqktlp kleeelkari emweqehska
      421 fvvngqkfme yvteqwemhr lekerakqer qlknkkqtet emlygstprt pnkrrglaps
      481 tpgkvrklnt ttmsnatans sirpvfsgtv yrspvsrlpp sgskpvitst csgkktprav
      541 khgankenle lngsilsggy pdsapprrnf sinsvastys efadslptde dvcvsevgma
//
LOCUS       XP_061014715             566 aa            linear   MAM 02-DEC-2023
DEFINITION  protein regulator of cytokinesis 1 isoform X9 [Dama dama].
ACCESSION   XP_061014715
VERSION     XP_061014715.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158732.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..566
                     /product="protein regulator of cytokinesis 1 isoform X9"
                     /calculated_mol_wt=66206
     Region          16..477
                     /region_name="MAP65_ASE1"
                     /note="Microtubule associated protein (MAP65/ASE1 family);
                     pfam03999"
                     /db_xref="CDD:427641"
     CDS             1..566
                     /gene="PRC1"
                     /coded_by="XM_061158732.1:135..1835"
                     /db_xref="GeneID:133067801"
ORIGIN      
        1 mrrsevlaee silclqkaln hlreiwelig ipedqrlqrt evvkkhikdl ldmmiaeees
       61 lkerliksia vcqkelntlc selnvepfhe egettilqle kdlrtqvelr rkqkkerkqe
      121 lkilqeqdqe lceilcmphy eidstsvpsl eelnqfrqhv atlretkasr reefvnikrq
      181 iilcmeeleh tpdtsferdv vcedeeafcl sleniatlqk llrqlevrka qneavceglr
      241 aqirelwdrl qipaeereav atvmtgskak vrkalqlevd rleelkmqnm kkvieairve
      301 vaqhwdkcfy sqeqrrafaa yysedytenl lqlhdaeivr lrnyyevhke lfegvqkwee
      361 swrlflefer kasdpsrftn rggnllkeek qraklqktlp kleeelkari emweqehska
      421 fvvngqkfme yvteqwemhr lekerakqer qlknkkqtet emlygstprt pnkrrglaps
      481 tpgkvrklnt ttmsnatans sirpvfsgtv yrspvsrlpp sgskpvitst csgkktprav
      541 khgankenle lngsilsart fkgfqi
//
LOCUS       XP_061014716             563 aa            linear   MAM 02-DEC-2023
DEFINITION  protein regulator of cytokinesis 1 isoform X10 [Dama dama].
ACCESSION   XP_061014716
VERSION     XP_061014716.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158733.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..563
                     /product="protein regulator of cytokinesis 1 isoform X10"
                     /calculated_mol_wt=65740
     Region          16..477
                     /region_name="MAP65_ASE1"
                     /note="Microtubule associated protein (MAP65/ASE1 family);
                     pfam03999"
                     /db_xref="CDD:427641"
     CDS             1..563
                     /gene="PRC1"
                     /coded_by="XM_061158733.1:135..1826"
                     /db_xref="GeneID:133067801"
ORIGIN      
        1 mrrsevlaee silclqkaln hlreiwelig ipedqrlqrt evvkkhikdl ldmmiaeees
       61 lkerliksia vcqkelntlc selnvepfhe egettilqle kdlrtqvelr rkqkkerkqe
      121 lkilqeqdqe lceilcmphy eidstsvpsl eelnqfrqhv atlretkasr reefvnikrq
      181 iilcmeeleh tpdtsferdv vcedeeafcl sleniatlqk llrqlevrka qneavceglr
      241 aqirelwdrl qipaeereav atvmtgskak vrkalqlevd rleelkmqnm kkvieairve
      301 vaqhwdkcfy sqeqrrafaa yysedytenl lqlhdaeivr lrnyyevhke lfegvqkwee
      361 swrlflefer kasdpsrftn rggnllkeek qraklqktlp kleeelkari emweqehska
      421 fvvngqkfme yvteqwemhr lekerakqer qlknkkqtet emlygstprt pnkrrglaps
      481 tpgkvrklnt ttmsnatans sirpvfsgtv yrspvsrlpp sgskpvitst csgkktprav
      541 khgankenle lngsilsegs vpl
//
LOCUS       XP_061014717             563 aa            linear   MAM 02-DEC-2023
DEFINITION  protein regulator of cytokinesis 1 isoform X10 [Dama dama].
ACCESSION   XP_061014717
VERSION     XP_061014717.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158734.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..563
                     /product="protein regulator of cytokinesis 1 isoform X10"
                     /calculated_mol_wt=65740
     Region          16..477
                     /region_name="MAP65_ASE1"
                     /note="Microtubule associated protein (MAP65/ASE1 family);
                     pfam03999"
                     /db_xref="CDD:427641"
     CDS             1..563
                     /gene="PRC1"
                     /coded_by="XM_061158734.1:135..1826"
                     /db_xref="GeneID:133067801"
ORIGIN      
        1 mrrsevlaee silclqkaln hlreiwelig ipedqrlqrt evvkkhikdl ldmmiaeees
       61 lkerliksia vcqkelntlc selnvepfhe egettilqle kdlrtqvelr rkqkkerkqe
      121 lkilqeqdqe lceilcmphy eidstsvpsl eelnqfrqhv atlretkasr reefvnikrq
      181 iilcmeeleh tpdtsferdv vcedeeafcl sleniatlqk llrqlevrka qneavceglr
      241 aqirelwdrl qipaeereav atvmtgskak vrkalqlevd rleelkmqnm kkvieairve
      301 vaqhwdkcfy sqeqrrafaa yysedytenl lqlhdaeivr lrnyyevhke lfegvqkwee
      361 swrlflefer kasdpsrftn rggnllkeek qraklqktlp kleeelkari emweqehska
      421 fvvngqkfme yvteqwemhr lekerakqer qlknkkqtet emlygstprt pnkrrglaps
      481 tpgkvrklnt ttmsnatans sirpvfsgtv yrspvsrlpp sgskpvitst csgkktprav
      541 khgankenle lngsilsegs vpl
//
LOCUS       XP_061014718             562 aa            linear   MAM 02-DEC-2023
DEFINITION  protein regulator of cytokinesis 1 isoform X11 [Dama dama].
ACCESSION   XP_061014718
VERSION     XP_061014718.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158735.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..562
                     /product="protein regulator of cytokinesis 1 isoform X11"
                     /calculated_mol_wt=65689
     Region          16..477
                     /region_name="MAP65_ASE1"
                     /note="Microtubule associated protein (MAP65/ASE1 family);
                     pfam03999"
                     /db_xref="CDD:427641"
     CDS             1..562
                     /gene="PRC1"
                     /coded_by="XM_061158735.1:135..1823"
                     /db_xref="GeneID:133067801"
ORIGIN      
        1 mrrsevlaee silclqkaln hlreiwelig ipedqrlqrt evvkkhikdl ldmmiaeees
       61 lkerliksia vcqkelntlc selnvepfhe egettilqle kdlrtqvelr rkqkkerkqe
      121 lkilqeqdqe lceilcmphy eidstsvpsl eelnqfrqhv atlretkasr reefvnikrq
      181 iilcmeeleh tpdtsferdv vcedeeafcl sleniatlqk llrqlevrka qneavceglr
      241 aqirelwdrl qipaeereav atvmtgskak vrkalqlevd rleelkmqnm kkvieairve
      301 vaqhwdkcfy sqeqrrafaa yysedytenl lqlhdaeivr lrnyyevhke lfegvqkwee
      361 swrlflefer kasdpsrftn rggnllkeek qraklqktlp kleeelkari emweqehska
      421 fvvngqkfme yvteqwemhr lekerakqer qlknkkqtet emlygstprt pnkrrglaps
      481 tpgkvrklnt ttmsnatans sirpvfsgtv yrspvsrlpp sgskpvitst csgkktprav
      541 khgankenle lngsilsgqp sy
//
LOCUS       XP_061014719             561 aa            linear   MAM 02-DEC-2023
DEFINITION  protein regulator of cytokinesis 1 isoform X12 [Dama dama].
ACCESSION   XP_061014719
VERSION     XP_061014719.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158736.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..561
                     /product="protein regulator of cytokinesis 1 isoform X12"
                     /calculated_mol_wt=65593
     Region          16..477
                     /region_name="MAP65_ASE1"
                     /note="Microtubule associated protein (MAP65/ASE1 family);
                     pfam03999"
                     /db_xref="CDD:427641"
     CDS             1..561
                     /gene="PRC1"
                     /coded_by="XM_061158736.1:135..1820"
                     /db_xref="GeneID:133067801"
ORIGIN      
        1 mrrsevlaee silclqkaln hlreiwelig ipedqrlqrt evvkkhikdl ldmmiaeees
       61 lkerliksia vcqkelntlc selnvepfhe egettilqle kdlrtqvelr rkqkkerkqe
      121 lkilqeqdqe lceilcmphy eidstsvpsl eelnqfrqhv atlretkasr reefvnikrq
      181 iilcmeeleh tpdtsferdv vcedeeafcl sleniatlqk llrqlevrka qneavceglr
      241 aqirelwdrl qipaeereav atvmtgskak vrkalqlevd rleelkmqnm kkvieairve
      301 vaqhwdkcfy sqeqrrafaa yysedytenl lqlhdaeivr lrnyyevhke lfegvqkwee
      361 swrlflefer kasdpsrftn rggnllkeek qraklqktlp kleeelkari emweqehska
      421 fvvngqkfme yvteqwemhr lekerakqer qlknkkqtet emlygstprt pnkrrglaps
      481 tpgkvrklnt ttmsnatans sirpvfsgtv yrspvsrlpp sgskpvitst csgkktprav
      541 khgankenle lngsilsgmf t
//
LOCUS       XP_061014720             376 aa            linear   MAM 02-DEC-2023
DEFINITION  RCC1 domain-containing protein 1 [Dama dama].
ACCESSION   XP_061014720
VERSION     XP_061014720.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158737.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..376
                     /product="RCC1 domain-containing protein 1"
                     /calculated_mol_wt=39793
     Region          <161..368
                     /region_name="ATS1"
                     /note="Alpha-tubulin suppressor ATS1 and related RCC1
                     domain-containing proteins [Cell cycle control, cell
                     division, chromosome partitioning, Cytoskeleton]; COG5184"
                     /db_xref="CDD:444065"
     CDS             1..376
                     /gene="RCCD1"
                     /coded_by="XM_061158737.1:344..1474"
                     /db_xref="GeneID:133067803"
ORIGIN      
        1 mdeehrgtwf gfgfcgfgqa lgsglgrqvh speplrtpgg nldvcrvsas wsytafvtrg
       61 grvqlsgaag gavggctdaw aseellvllr agpgagaelq awapgsalrg eplwsqavqe
      121 aeggpsrden qagplpllpc arayvsprpp fyrplaptlr arrlelgaeh allldaagqv
      181 fswgagrhgq lghgtleaep eprllealqg lpmaevaagg whsvclsetg diyiwgwnes
      241 gqlalptksl aedgkttaga sgldedgfev krvstgedga papfiavqpf palldlspgs
      301 eavkvscgsr htavltrtge lytwgwgkyg qlghkdtttl drpcrveyfv dkqlqvrtvs
      361 cgpwntyvya vekeks
//
LOCUS       XP_061014721             376 aa            linear   MAM 02-DEC-2023
DEFINITION  RCC1 domain-containing protein 1 [Dama dama].
ACCESSION   XP_061014721
VERSION     XP_061014721.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158738.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..376
                     /product="RCC1 domain-containing protein 1"
                     /calculated_mol_wt=39793
     Region          <161..368
                     /region_name="ATS1"
                     /note="Alpha-tubulin suppressor ATS1 and related RCC1
                     domain-containing proteins [Cell cycle control, cell
                     division, chromosome partitioning, Cytoskeleton]; COG5184"
                     /db_xref="CDD:444065"
     CDS             1..376
                     /gene="RCCD1"
                     /coded_by="XM_061158738.1:418..1548"
                     /db_xref="GeneID:133067803"
ORIGIN      
        1 mdeehrgtwf gfgfcgfgqa lgsglgrqvh speplrtpgg nldvcrvsas wsytafvtrg
       61 grvqlsgaag gavggctdaw aseellvllr agpgagaelq awapgsalrg eplwsqavqe
      121 aeggpsrden qagplpllpc arayvsprpp fyrplaptlr arrlelgaeh allldaagqv
      181 fswgagrhgq lghgtleaep eprllealqg lpmaevaagg whsvclsetg diyiwgwnes
      241 gqlalptksl aedgkttaga sgldedgfev krvstgedga papfiavqpf palldlspgs
      301 eavkvscgsr htavltrtge lytwgwgkyg qlghkdtttl drpcrveyfv dkqlqvrtvs
      361 cgpwntyvya vekeks
//
LOCUS       XP_061014722             944 aa            linear   MAM 02-DEC-2023
DEFINITION  protein unc-45 homolog A isoform X1 [Dama dama].
ACCESSION   XP_061014722
VERSION     XP_061014722.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158739.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..944
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..944
                     /product="protein unc-45 homolog A isoform X1"
                     /calculated_mol_wt=102935
     Region          21..49
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(22,25..26,29..30,32,59,62..63,66..67,69..70,93,
                     96..97,100..101,104)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          28..>136
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          57..87
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          76..217
                     /region_name="NrfG"
                     /note="Cytochrome c-type biogenesis protein CcmH/NrfG
                     [Energy production and conversion, Posttranslational
                     modification, protein turnover, chaperones]; COG4235"
                     /db_xref="CDD:443378"
     Region          92..120
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          361..505
                     /region_name="UNC45-central"
                     /note="Myosin-binding striated muscle assembly central;
                     pfam11701"
                     /db_xref="CDD:432011"
     CDS             1..944
                     /gene="UNC45A"
                     /coded_by="XM_061158739.1:104..2938"
                     /db_xref="GeneID:133067804"
ORIGIN      
        1 mtvsgpgtpe pqsagpgass veqlrkdgne lfkcgdyega ltaytqalgl gatpqdqail
       61 hrnraachlk ledyekaete atkaiekdgg dvkalyrrsq aleklgrldq avldlqrcvs
      121 lepknkvfqe alrniagqiq ekvrymsstd akveqmfqil ldpqekgtek kqkasqnlvv
      181 laredagaek ifrsngvqll qrlldtgepd lmlaalrtlv gicsehqsrt vatlsmlgtr
      241 rvvsmlgvqn qavslaachl lqvmfdalke gvkkgfrgke gaiivdpare lkvlisnlle
      301 lltevgvsgq grdnaltlli kvvprkspkd pnnsltlwvi dqglkkilev ggsvqdppge
      361 ltvtansrms asillsklfd dlkcdaeren fhrlcenyik swfeghglag klraiqtvsc
      421 llqgpcdagn ralelngvme svialcaseq eeeqlvavea lihaagkakr asfitangvs
      481 llkdlykrse kdsiriralv glcklgsagg tdfsmkqfae gstlklakqc rkwlcndqmd
      541 vgtrrwaveg layltfdadv keefvedaaa lkallqlsks eersvlfava salvnctnsy
      601 dyeepdpkmv elakyakqhv peqhpkdkps fvrarvkkll aagvvsamtc mvktespvlt
      661 sscrellsrv flalveeved rgtvvaqggg kallplaleg tdvgqtkaaq alakltitsn
      721 pemtfpgeri yevvrplvsl lhlncsglqn fealmaltnl agiserlrqk ilkekavpmi
      781 egymfeehem lrraatecmc nlamskevqd lfeatgndrl kllvlysged dellrraaag
      841 glamltsvrp slcsripqvt thwleilqal llspsqelqh rgavvvlnmv easreiastl
      901 mesevleils vlakdkespv traataclgk aveyglikps qdgk
//
LOCUS       XP_061014723             929 aa            linear   MAM 02-DEC-2023
DEFINITION  protein unc-45 homolog A isoform X2 [Dama dama].
ACCESSION   XP_061014723
VERSION     XP_061014723.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158740.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..929
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..929
                     /product="protein unc-45 homolog A isoform X2"
                     /calculated_mol_wt=101616
     Region          6..34
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(7,10..11,14..15,17,44,47..48,51..52,54..55,78,
                     81..82,85..86,89)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          <13..>110
                     /region_name="NlpI"
                     /note="Lipoprotein NlpI, contains TPR repeats [Cell
                     wall/membrane/envelope biogenesis]; COG4785"
                     /db_xref="CDD:443815"
     Region          42..72
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          61..202
                     /region_name="NrfG"
                     /note="Cytochrome c-type biogenesis protein CcmH/NrfG
                     [Energy production and conversion, Posttranslational
                     modification, protein turnover, chaperones]; COG4235"
                     /db_xref="CDD:443378"
     Region          77..105
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          346..490
                     /region_name="UNC45-central"
                     /note="Myosin-binding striated muscle assembly central;
                     pfam11701"
                     /db_xref="CDD:432011"
     CDS             1..929
                     /gene="UNC45A"
                     /coded_by="XM_061158740.1:118..2907"
                     /db_xref="GeneID:133067804"
ORIGIN      
        1 mtassveqlr kdgnelfkcg dyegaltayt qalglgatpq dqailhrnra achlkledye
       61 kaeteatkai ekdggdvkal yrrsqalekl grldqavldl qrcvslepkn kvfqealrni
      121 agqiqekvry msstdakveq mfqilldpqe kgtekkqkas qnlvvlared agaekifrsn
      181 gvqllqrlld tgepdlmlaa lrtlvgicse hqsrtvatls mlgtrrvvsm lgvqnqavsl
      241 aachllqvmf dalkegvkkg frgkegaiiv dparelkvli snllelltev gvsgqgrdna
      301 ltllikvvpr kspkdpnnsl tlwvidqglk kilevggsvq dppgeltvta nsrmsasill
      361 sklfddlkcd aerenfhrlc enyikswfeg hglagklrai qtvscllqgp cdagnralel
      421 ngvmesvial caseqeeeql vavealihaa gkakrasfit angvsllkdl ykrsekdsir
      481 iralvglckl gsaggtdfsm kqfaegstlk lakqcrkwlc ndqmdvgtrr waveglaylt
      541 fdadvkeefv edaaalkall qlskseersv lfavasalvn ctnsydyeep dpkmvelaky
      601 akqhvpeqhp kdkpsfvrar vkkllaagvv samtcmvkte spvltsscre llsrvflalv
      661 eevedrgtvv aqgggkallp lalegtdvgq tkaaqalakl titsnpemtf pgeriyevvr
      721 plvsllhlnc sglqnfealm altnlagise rlrqkilkek avpmiegymf eehemlrraa
      781 tecmcnlams kevqdlfeat gndrlkllvl ysgeddellr raaagglaml tsvrpslcsr
      841 ipqvtthwle ilqalllsps qelqhrgavv vlnmveasre iastlmesev leilsvlakd
      901 kespvtraat aclgkaveyg likpsqdgk
//
LOCUS       XP_061014724             179 aa            linear   MAM 02-DEC-2023
DEFINITION  guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1
            [Dama dama].
ACCESSION   XP_061014724
VERSION     XP_061014724.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158741.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..179
                     /product="guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase MESH1"
                     /calculated_mol_wt=20281
     Region          4..>136
                     /region_name="SpoT"
                     /note="(p)ppGpp synthase/hydrolase, HD superfamily [Signal
                     transduction mechanisms, Transcription]; COG0317"
                     /db_xref="CDD:440086"
     CDS             1..179
                     /gene="HDDC3"
                     /coded_by="XM_061158741.1:45..584"
                     /db_xref="GeneID:133067806"
ORIGIN      
        1 mgsevaqlle aadfaarkhq rqrrkdpegt pyinhpigva riltheagit divvlqaall
       61 hdtvedtdtt ldevelhfgd qvrrlveevt ddktlpkler krlqveqapq sspgaklvkl
      121 adklynlrdl nrctpegwse hrvqeyfewa aqvvkglqgt nrqleealrq lfkergltl
//
LOCUS       XP_061014725            1150 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-mannosidase 2x isoform X1 [Dama dama].
ACCESSION   XP_061014725
VERSION     XP_061014725.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158742.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1150
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1150
                     /product="alpha-mannosidase 2x isoform X1"
                     /calculated_mol_wt=130110
     Region          136..1149
                     /region_name="PLN02701"
                     /note="alpha-mannosidase"
                     /db_xref="CDD:178304"
     CDS             1..1150
                     /gene="MAN2A2"
                     /coded_by="XM_061158742.1:333..3785"
                     /db_xref="GeneID:133067807"
ORIGIN      
        1 mklkkqvtvc gaaifcvavf slylmldrvq hdparhqngg nfprsqisvl qnrieqleql
       61 leenheiish ikdsvlelta nvegppalvp yyvangswvv ppeprpsffs ispqdcqfal
      121 ggrgqkpelq mltvseelpf dnvdggvwkq gfdisysprd wdteslqvfv vphshndpgw
      181 lktfdkyyte qtqhilnnmv sklqedprrr fiwaevsffa kwwdnisaqk raavrrlvgn
      241 gqleiatggw vmpdeanshy falidqlieg hqwleknlga tprsgwavdp fgysptmpyl
      301 lrranltsml iqrvhyaikk hfaashslef mwrqtwdsda stdifchmmp fysydvphtc
      361 gpdpkiccqf dfkrlpggri scpwkvppra iteanvaera gllldqyrkk srlfrsnvll
      421 vplgddfryd kpqewdaqff nyqrlfdfln skpdlhvqaq fgtlsdyfda lykrtgvepg
      481 arppgfpvls gdffsyadre dhywtgyyts rpfyknldrv leahlrgaei lyslavahar
      541 raglasqfpl snfalltdar rtlglfqhhd aitgtakeav vvdygvrllr slvslkqvii
      601 naahylvlgd kktyhfdpev pflqmddtrl nhdalpertv iqlesspryv vlfnpleqer
      661 lsvvsllvss prvrvlseeg qplavqisah wssatdmvpd vyqvslpvrl palglgvlql
      721 qqgldgprtl pssvrvylhg rplsvsrnea fplrvidsgt sdfalsnrym qvwfsgltgl
      781 lksvrrvdee qeqrvdmefl vygtrsskdk sgaylflpdg eakpyvprdp pvlrvtegpf
      841 fsevvacyeh vhqvvrlynl pgveglsldv sslvdirdyv nkelalrirt didsqgafft
      901 dlngfqvqpr rylkklplqa nfypmpvmay lqdaqnrltl htaqalgvss lhngqlevil
      961 drrlmqddnr glgqglkdnk rtcnhfrlll errtlgrevr egpstsypsl lshltsmyln
     1021 tpvlalpvar rqapgpalrs fhplasslpc dfhllnlrtl qaeedglpsa etalllhrkg
     1081 fdcgleaknl gfncttsqgk valgslfhgl dvvflqptsl tllyplasps nstdvyvepm
     1141 eiatfrlrlg
//
LOCUS       XP_061014726            1150 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-mannosidase 2x isoform X1 [Dama dama].
ACCESSION   XP_061014726
VERSION     XP_061014726.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158743.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1150
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1150
                     /product="alpha-mannosidase 2x isoform X1"
                     /calculated_mol_wt=130110
     Region          136..1149
                     /region_name="PLN02701"
                     /note="alpha-mannosidase"
                     /db_xref="CDD:178304"
     CDS             1..1150
                     /gene="MAN2A2"
                     /coded_by="XM_061158743.1:298..3750"
                     /db_xref="GeneID:133067807"
ORIGIN      
        1 mklkkqvtvc gaaifcvavf slylmldrvq hdparhqngg nfprsqisvl qnrieqleql
       61 leenheiish ikdsvlelta nvegppalvp yyvangswvv ppeprpsffs ispqdcqfal
      121 ggrgqkpelq mltvseelpf dnvdggvwkq gfdisysprd wdteslqvfv vphshndpgw
      181 lktfdkyyte qtqhilnnmv sklqedprrr fiwaevsffa kwwdnisaqk raavrrlvgn
      241 gqleiatggw vmpdeanshy falidqlieg hqwleknlga tprsgwavdp fgysptmpyl
      301 lrranltsml iqrvhyaikk hfaashslef mwrqtwdsda stdifchmmp fysydvphtc
      361 gpdpkiccqf dfkrlpggri scpwkvppra iteanvaera gllldqyrkk srlfrsnvll
      421 vplgddfryd kpqewdaqff nyqrlfdfln skpdlhvqaq fgtlsdyfda lykrtgvepg
      481 arppgfpvls gdffsyadre dhywtgyyts rpfyknldrv leahlrgaei lyslavahar
      541 raglasqfpl snfalltdar rtlglfqhhd aitgtakeav vvdygvrllr slvslkqvii
      601 naahylvlgd kktyhfdpev pflqmddtrl nhdalpertv iqlesspryv vlfnpleqer
      661 lsvvsllvss prvrvlseeg qplavqisah wssatdmvpd vyqvslpvrl palglgvlql
      721 qqgldgprtl pssvrvylhg rplsvsrnea fplrvidsgt sdfalsnrym qvwfsgltgl
      781 lksvrrvdee qeqrvdmefl vygtrsskdk sgaylflpdg eakpyvprdp pvlrvtegpf
      841 fsevvacyeh vhqvvrlynl pgveglsldv sslvdirdyv nkelalrirt didsqgafft
      901 dlngfqvqpr rylkklplqa nfypmpvmay lqdaqnrltl htaqalgvss lhngqlevil
      961 drrlmqddnr glgqglkdnk rtcnhfrlll errtlgrevr egpstsypsl lshltsmyln
     1021 tpvlalpvar rqapgpalrs fhplasslpc dfhllnlrtl qaeedglpsa etalllhrkg
     1081 fdcgleaknl gfncttsqgk valgslfhgl dvvflqptsl tllyplasps nstdvyvepm
     1141 eiatfrlrlg
//
LOCUS       XP_061014728            1150 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-mannosidase 2x isoform X1 [Dama dama].
ACCESSION   XP_061014728
VERSION     XP_061014728.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158745.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1150
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1150
                     /product="alpha-mannosidase 2x isoform X1"
                     /calculated_mol_wt=130110
     Region          136..1149
                     /region_name="PLN02701"
                     /note="alpha-mannosidase"
                     /db_xref="CDD:178304"
     CDS             1..1150
                     /gene="MAN2A2"
                     /coded_by="XM_061158745.1:329..3781"
                     /db_xref="GeneID:133067807"
ORIGIN      
        1 mklkkqvtvc gaaifcvavf slylmldrvq hdparhqngg nfprsqisvl qnrieqleql
       61 leenheiish ikdsvlelta nvegppalvp yyvangswvv ppeprpsffs ispqdcqfal
      121 ggrgqkpelq mltvseelpf dnvdggvwkq gfdisysprd wdteslqvfv vphshndpgw
      181 lktfdkyyte qtqhilnnmv sklqedprrr fiwaevsffa kwwdnisaqk raavrrlvgn
      241 gqleiatggw vmpdeanshy falidqlieg hqwleknlga tprsgwavdp fgysptmpyl
      301 lrranltsml iqrvhyaikk hfaashslef mwrqtwdsda stdifchmmp fysydvphtc
      361 gpdpkiccqf dfkrlpggri scpwkvppra iteanvaera gllldqyrkk srlfrsnvll
      421 vplgddfryd kpqewdaqff nyqrlfdfln skpdlhvqaq fgtlsdyfda lykrtgvepg
      481 arppgfpvls gdffsyadre dhywtgyyts rpfyknldrv leahlrgaei lyslavahar
      541 raglasqfpl snfalltdar rtlglfqhhd aitgtakeav vvdygvrllr slvslkqvii
      601 naahylvlgd kktyhfdpev pflqmddtrl nhdalpertv iqlesspryv vlfnpleqer
      661 lsvvsllvss prvrvlseeg qplavqisah wssatdmvpd vyqvslpvrl palglgvlql
      721 qqgldgprtl pssvrvylhg rplsvsrnea fplrvidsgt sdfalsnrym qvwfsgltgl
      781 lksvrrvdee qeqrvdmefl vygtrsskdk sgaylflpdg eakpyvprdp pvlrvtegpf
      841 fsevvacyeh vhqvvrlynl pgveglsldv sslvdirdyv nkelalrirt didsqgafft
      901 dlngfqvqpr rylkklplqa nfypmpvmay lqdaqnrltl htaqalgvss lhngqlevil
      961 drrlmqddnr glgqglkdnk rtcnhfrlll errtlgrevr egpstsypsl lshltsmyln
     1021 tpvlalpvar rqapgpalrs fhplasslpc dfhllnlrtl qaeedglpsa etalllhrkg
     1081 fdcgleaknl gfncttsqgk valgslfhgl dvvflqptsl tllyplasps nstdvyvepm
     1141 eiatfrlrlg
//
LOCUS       XP_061014729            1150 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-mannosidase 2x isoform X1 [Dama dama].
ACCESSION   XP_061014729
VERSION     XP_061014729.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158746.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1150
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1150
                     /product="alpha-mannosidase 2x isoform X1"
                     /calculated_mol_wt=130110
     Region          136..1149
                     /region_name="PLN02701"
                     /note="alpha-mannosidase"
                     /db_xref="CDD:178304"
     CDS             1..1150
                     /gene="MAN2A2"
                     /coded_by="XM_061158746.1:131..3583"
                     /db_xref="GeneID:133067807"
ORIGIN      
        1 mklkkqvtvc gaaifcvavf slylmldrvq hdparhqngg nfprsqisvl qnrieqleql
       61 leenheiish ikdsvlelta nvegppalvp yyvangswvv ppeprpsffs ispqdcqfal
      121 ggrgqkpelq mltvseelpf dnvdggvwkq gfdisysprd wdteslqvfv vphshndpgw
      181 lktfdkyyte qtqhilnnmv sklqedprrr fiwaevsffa kwwdnisaqk raavrrlvgn
      241 gqleiatggw vmpdeanshy falidqlieg hqwleknlga tprsgwavdp fgysptmpyl
      301 lrranltsml iqrvhyaikk hfaashslef mwrqtwdsda stdifchmmp fysydvphtc
      361 gpdpkiccqf dfkrlpggri scpwkvppra iteanvaera gllldqyrkk srlfrsnvll
      421 vplgddfryd kpqewdaqff nyqrlfdfln skpdlhvqaq fgtlsdyfda lykrtgvepg
      481 arppgfpvls gdffsyadre dhywtgyyts rpfyknldrv leahlrgaei lyslavahar
      541 raglasqfpl snfalltdar rtlglfqhhd aitgtakeav vvdygvrllr slvslkqvii
      601 naahylvlgd kktyhfdpev pflqmddtrl nhdalpertv iqlesspryv vlfnpleqer
      661 lsvvsllvss prvrvlseeg qplavqisah wssatdmvpd vyqvslpvrl palglgvlql
      721 qqgldgprtl pssvrvylhg rplsvsrnea fplrvidsgt sdfalsnrym qvwfsgltgl
      781 lksvrrvdee qeqrvdmefl vygtrsskdk sgaylflpdg eakpyvprdp pvlrvtegpf
      841 fsevvacyeh vhqvvrlynl pgveglsldv sslvdirdyv nkelalrirt didsqgafft
      901 dlngfqvqpr rylkklplqa nfypmpvmay lqdaqnrltl htaqalgvss lhngqlevil
      961 drrlmqddnr glgqglkdnk rtcnhfrlll errtlgrevr egpstsypsl lshltsmyln
     1021 tpvlalpvar rqapgpalrs fhplasslpc dfhllnlrtl qaeedglpsa etalllhrkg
     1081 fdcgleaknl gfncttsqgk valgslfhgl dvvflqptsl tllyplasps nstdvyvepm
     1141 eiatfrlrlg
//
LOCUS       XP_061014730            1114 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-mannosidase 2x isoform X2 [Dama dama].
ACCESSION   XP_061014730
VERSION     XP_061014730.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158747.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1114
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1114
                     /product="alpha-mannosidase 2x isoform X2"
                     /calculated_mol_wt=126111
     Region          100..1113
                     /region_name="PLN02701"
                     /note="alpha-mannosidase"
                     /db_xref="CDD:178304"
     CDS             1..1114
                     /gene="MAN2A2"
                     /coded_by="XM_061158747.1:424..3768"
                     /db_xref="GeneID:133067807"
ORIGIN      
        1 milldtrtsq isvlqnrieq leqlleenhe iishikdsvl eltanvegpp alvpyyvang
       61 swvvppeprp sffsispqdc qfalggrgqk pelqmltvse elpfdnvdgg vwkqgfdisy
      121 sprdwdtesl qvfvvphshn dpgwlktfdk yyteqtqhil nnmvsklqed prrrfiwaev
      181 sffakwwdni saqkraavrr lvgngqleia tggwvmpdea nshyfalidq lieghqwlek
      241 nlgatprsgw avdpfgyspt mpyllrranl tsmliqrvhy aikkhfaash slefmwrqtw
      301 dsdastdifc hmmpfysydv phtcgpdpki ccqfdfkrlp ggriscpwkv ppraiteanv
      361 aeragllldq yrkksrlfrs nvllvplgdd frydkpqewd aqffnyqrlf dflnskpdlh
      421 vqaqfgtlsd yfdalykrtg vepgarppgf pvlsgdffsy adredhywtg yytsrpfykn
      481 ldrvleahlr gaeilyslav aharraglas qfplsnfall tdarrtlglf qhhdaitgta
      541 keavvvdygv rllrslvslk qviinaahyl vlgdkktyhf dpevpflqmd dtrlnhdalp
      601 ertviqless pryvvlfnpl eqerlsvvsl lvssprvrvl seegqplavq isahwssatd
      661 mvpdvyqvsl pvrlpalglg vlqlqqgldg prtlpssvrv ylhgrplsvs rneafplrvi
      721 dsgtsdfals nrymqvwfsg ltgllksvrr vdeeqeqrvd meflvygtrs skdksgaylf
      781 lpdgeakpyv prdppvlrvt egpffsevva cyehvhqvvr lynlpgvegl sldvsslvdi
      841 rdyvnkelal rirtdidsqg afftdlngfq vqprrylkkl plqanfypmp vmaylqdaqn
      901 rltlhtaqal gvsslhngql evildrrlmq ddnrglgqgl kdnkrtcnhf rlllerrtlg
      961 revregpsts ypsllshlts mylntpvlal pvarrqapgp alrsfhplas slpcdfhlln
     1021 lrtlqaeedg lpsaetalll hrkgfdcgle aknlgfnctt sqgkvalgsl fhgldvvflq
     1081 ptsltllypl aspsnstdvy vepmeiatfr lrlg
//
LOCUS       XP_061014731            1114 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-mannosidase 2x isoform X2 [Dama dama].
ACCESSION   XP_061014731
VERSION     XP_061014731.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158748.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1114
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1114
                     /product="alpha-mannosidase 2x isoform X2"
                     /calculated_mol_wt=126111
     Region          100..1113
                     /region_name="PLN02701"
                     /note="alpha-mannosidase"
                     /db_xref="CDD:178304"
     CDS             1..1114
                     /gene="MAN2A2"
                     /coded_by="XM_061158748.1:420..3764"
                     /db_xref="GeneID:133067807"
ORIGIN      
        1 milldtrtsq isvlqnrieq leqlleenhe iishikdsvl eltanvegpp alvpyyvang
       61 swvvppeprp sffsispqdc qfalggrgqk pelqmltvse elpfdnvdgg vwkqgfdisy
      121 sprdwdtesl qvfvvphshn dpgwlktfdk yyteqtqhil nnmvsklqed prrrfiwaev
      181 sffakwwdni saqkraavrr lvgngqleia tggwvmpdea nshyfalidq lieghqwlek
      241 nlgatprsgw avdpfgyspt mpyllrranl tsmliqrvhy aikkhfaash slefmwrqtw
      301 dsdastdifc hmmpfysydv phtcgpdpki ccqfdfkrlp ggriscpwkv ppraiteanv
      361 aeragllldq yrkksrlfrs nvllvplgdd frydkpqewd aqffnyqrlf dflnskpdlh
      421 vqaqfgtlsd yfdalykrtg vepgarppgf pvlsgdffsy adredhywtg yytsrpfykn
      481 ldrvleahlr gaeilyslav aharraglas qfplsnfall tdarrtlglf qhhdaitgta
      541 keavvvdygv rllrslvslk qviinaahyl vlgdkktyhf dpevpflqmd dtrlnhdalp
      601 ertviqless pryvvlfnpl eqerlsvvsl lvssprvrvl seegqplavq isahwssatd
      661 mvpdvyqvsl pvrlpalglg vlqlqqgldg prtlpssvrv ylhgrplsvs rneafplrvi
      721 dsgtsdfals nrymqvwfsg ltgllksvrr vdeeqeqrvd meflvygtrs skdksgaylf
      781 lpdgeakpyv prdppvlrvt egpffsevva cyehvhqvvr lynlpgvegl sldvsslvdi
      841 rdyvnkelal rirtdidsqg afftdlngfq vqprrylkkl plqanfypmp vmaylqdaqn
      901 rltlhtaqal gvsslhngql evildrrlmq ddnrglgqgl kdnkrtcnhf rlllerrtlg
      961 revregpsts ypsllshlts mylntpvlal pvarrqapgp alrsfhplas slpcdfhlln
     1021 lrtlqaeedg lpsaetalll hrkgfdcgle aknlgfnctt sqgkvalgsl fhgldvvflq
     1081 ptsltllypl aspsnstdvy vepmeiatfr lrlg
//
LOCUS       XP_061014732            1101 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-mannosidase 2x isoform X3 [Dama dama].
ACCESSION   XP_061014732
VERSION     XP_061014732.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158749.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1101
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1101
                     /product="alpha-mannosidase 2x isoform X3"
                     /calculated_mol_wt=124815
     Region          136..1096
                     /region_name="PLN02701"
                     /note="alpha-mannosidase"
                     /db_xref="CDD:178304"
     CDS             1..1101
                     /gene="MAN2A2"
                     /coded_by="XM_061158749.1:334..3639"
                     /db_xref="GeneID:133067807"
ORIGIN      
        1 mklkkqvtvc gaaifcvavf slylmldrvq hdparhqngg nfprsqisvl qnrieqleql
       61 leenheiish ikdsvlelta nvegppalvp yyvangswvv ppeprpsffs ispqdcqfal
      121 ggrgqkpelq mltvseelpf dnvdggvwkq gfdisysprd wdteslqvfv vphshndpgw
      181 lktfdkyyte qtqhilnnmv sklqedprrr fiwaevsffa kwwdnisaqk raavrrlvgn
      241 gqleiatggw vmpdeanshy falidqlieg hqwleknlga tprsgwavdp fgysptmpyl
      301 lrranltsml iqrvhyaikk hfaashslef mwrqtwdsda stdifchmmp fysydvphtc
      361 gpdpkiccqf dfkrlpggri scpwkvppra iteanvaera gllldqyrkk srlfrsnvll
      421 vplgddfryd kpqewdaqff nyqrlfdfln skpdlhvqaq fgtlsdyfda lykrtgvepg
      481 arppgfpvls gdffsyadre dhywtgyyts rpfyknldrv leahlrgaei lyslavahar
      541 raglasqfpl snfalltdar rtlglfqhhd aitgtakeav vvdygvrllr slvslkqvii
      601 naahylvlgd kktyhfdpev pflqmddtrl nhdalpertv iqlesspryv vlfnpleqer
      661 lsvvsllvss prvrvlseeg qplavqisah wssatdmvpd vyqvslpvrl palglgvlql
      721 qqgldgprtl pssvrvylhg rplsvsrnea fplrvidsgt sdfalsnrym qvwfsgltgl
      781 lksvrrvdee qeqrvdmefl vygtrsskdk sgaylflpdg eakpyvprdp pvlrvtegpf
      841 fsevvacyeh vhqvvrlynl pgveglsldv sslvdirdyv nkelalrirt didsqgafft
      901 dlngfqvqpr rylkklplqa nfypmpvmay lqdaqnrltl htaqalgvss lhngqlevil
      961 drrlmqddnr glgqglkdnk rtcnhfrlll errtlgrevr egpstsypsl lshltsmyln
     1021 tpvlalpvar rqapgpalrs fhplasslpc dfhllnlrtl qaeedglpsa etalllhrkg
     1081 fdcgleaknl gfncttsqgk h
//
LOCUS       XP_061014733            1089 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-mannosidase 2x isoform X4 [Dama dama].
ACCESSION   XP_061014733
VERSION     XP_061014733.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158750.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1089
                     /product="alpha-mannosidase 2x isoform X4"
                     /calculated_mol_wt=123591
     Region          136..1088
                     /region_name="PLN02701"
                     /note="alpha-mannosidase"
                     /db_xref="CDD:178304"
     CDS             1..1089
                     /gene="MAN2A2"
                     /coded_by="XM_061158750.1:334..3603"
                     /db_xref="GeneID:133067807"
ORIGIN      
        1 mklkkqvtvc gaaifcvavf slylmldrvq hdparhqngg nfprsqisvl qnrieqleql
       61 leenheiish ikdsvlelta nvegppalvp yyvangswvv ppeprpsffs ispqdcqfal
      121 ggrgqkpelq mltvseelpf dnvdggvwkq gfdisysprd wdteslqvfv vphshndpgw
      181 lktfdkyyte qtqhilnnmv sklqedprrr fiwaevsffa kwwdnisaqk raavrrlvgn
      241 gqleiatggw vmpdeanshy falidqlieg hqwleknlga tprsgwavdp fgysptmpyl
      301 lrranltsml iqrvhyaikk hfaashslef mwrqtwdsda stdifchmmp fysydvphtc
      361 gpdpkiccqf dfkrlpggri scpwkvppra iteanvaera gllldqyrkk srlfrsnvll
      421 vplgddfryd kpqewdaqff nyqrlfdfln skpdlhvqaq fgtlsdyfda lykrtgvepg
      481 arppgfpvls gdffsyadre dhywtgyyts rpfyknldrv leahlrllrs lvslkqviin
      541 aahylvlgdk ktyhfdpevp flqmddtrln hdalpertvi qlesspryvv lfnpleqerl
      601 svvsllvssp rvrvlseegq plavqisahw ssatdmvpdv yqvslpvrlp alglgvlqlq
      661 qgldgprtlp ssvrvylhgr plsvsrneaf plrvidsgts dfalsnrymq vwfsgltgll
      721 ksvrrvdeeq eqrvdmeflv ygtrsskdks gaylflpdge akpyvprdpp vlrvtegpff
      781 sevvacyehv hqvvrlynlp gveglsldvs slvdirdyvn kelalrirtd idsqgafftd
      841 lngfqvqprr ylkklplqan fypmpvmayl qdaqnrltlh taqalgvssl hngqlevild
      901 rrlmqddnrg lgqglkdnkr tcnhfrllle rrtlgrevre gpstsypsll shltsmylnt
      961 pvlalpvarr qapgpalrsf hplasslpcd fhllnlrtlq aeedglpsae talllhrkgf
     1021 dcgleaknlg fncttsqgkv algslfhgld vvflqptslt llyplaspsn stdvyvepme
     1081 iatfrlrlg
//
LOCUS       XP_061014734             822 aa            linear   MAM 02-DEC-2023
DEFINITION  tyrosine-protein kinase Fes/Fps [Dama dama].
ACCESSION   XP_061014734
VERSION     XP_061014734.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158751.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..822
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..822
                     /product="tyrosine-protein kinase Fes/Fps"
                     /calculated_mol_wt=93078
     Region          7..239
                     /region_name="F-BAR_Fes"
                     /note="The F-BAR (FES-CIP4 Homology and
                     Bin/Amphiphysin/Rvs) domain of Fes (feline sarcoma)
                     tyrosine kinase; cd07685"
                     /db_xref="CDD:153369"
     Site            order(12,15,22,25..26,29,32..33,36..37,40,44,47,51,79,82,
                     169,173,198,206,209,212..213,216,220,223,227,231,234..235,
                     238)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153369"
     Region          453..537
                     /region_name="SH2_Fps_family"
                     /note="Src homology 2 (SH2) domain found in feline
                     sarcoma, Fujinami poultry sarcoma, and fes-related
                     (Fes/Fps/Fer) proteins; cd10361"
                     /db_xref="CDD:198224"
     Site            order(467,483,503,505)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198224"
     Site            order(504,530)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198224"
     Region          564..815
                     /region_name="PTKc_Fes"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     Fes; cd05084"
                     /db_xref="CDD:270667"
     Site            order(567..569,575,588,590,607,636..639,642..643,683,
                     687..688,690,700..701,704,719..724,726,732,766,770)
                     /site_type="active"
                     /db_xref="CDD:270667"
     Site            order(567..569,575,588,590,607,636..639,642..643,687..688,
                     690,700..701)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270667"
     Site            order(683,687..688,704,719..724,726,732,766,770)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270667"
     Site            700..725
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270667"
     CDS             1..822
                     /gene="FES"
                     /coded_by="XM_061158751.1:163..2631"
                     /db_xref="GeneID:133067808"
ORIGIN      
        1 mgfsselcsp qghgavqqmq eaelrllegm rkwmaqrvks dreyagllhh mslqdsggqs
       61 rgigahspis qswteltsqt eglsrvlrqh aedlnsgpls klsllirerq qlrktyneqw
      121 qqlqqeltks hsqdieklks qyralardsa qarrkyqeag kdkdrdkakd kyvrslwklf
      181 ahhnryvlgv raaqlhhqhh hqlmlpsllq slqdlhqema cilketlqey leisslvqde
      241 vvtihremaa avariqpeae yqgflqqygs apdipprvtf deslleetel lepgelqlne
      301 ltvesvqhtl tsvtddlaaa tqtvlsrqea vtqlqrelrn eeqtthprer vqllgkkqal
      361 qealqglqva lcgqaklqaq qellqakldr lgpgepppvl llqddrhsts sseqereggr
      421 tptleilksh isgifrpkfs lppplqlvpe vqkplheqvw yhgaipraev aellthsgdf
      481 lvresqgkqe yvlsvlwdgq prhfiiqsad nlyrlegdgf psipllvdhl lrsqqpltkk
      541 sgivlnravp kdkwalshed lvlgeqigrg nfgevfsgrl radntlvavk scretlppdl
      601 kakflqeari lkqyshpniv rligvctqkq piyivmelvq ggdfltflrt egarlrvktl
      661 lqmvgdaaag meyleskcci hrdlaarncl vteknvlkis dfgmsreead gvyaasgglr
      721 qvpvkwtape alnygrysse sdvwsfgill wetfslgasp ypnlsnqqtr efvekggrlp
      781 cpelcpdavf rlmehcwaye pgqrptfsii yqelqsirkr hr
//
LOCUS       XP_061014735             822 aa            linear   MAM 02-DEC-2023
DEFINITION  tyrosine-protein kinase Fes/Fps [Dama dama].
ACCESSION   XP_061014735
VERSION     XP_061014735.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158752.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..822
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..822
                     /product="tyrosine-protein kinase Fes/Fps"
                     /calculated_mol_wt=93078
     Region          7..239
                     /region_name="F-BAR_Fes"
                     /note="The F-BAR (FES-CIP4 Homology and
                     Bin/Amphiphysin/Rvs) domain of Fes (feline sarcoma)
                     tyrosine kinase; cd07685"
                     /db_xref="CDD:153369"
     Site            order(12,15,22,25..26,29,32..33,36..37,40,44,47,51,79,82,
                     169,173,198,206,209,212..213,216,220,223,227,231,234..235,
                     238)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153369"
     Region          453..537
                     /region_name="SH2_Fps_family"
                     /note="Src homology 2 (SH2) domain found in feline
                     sarcoma, Fujinami poultry sarcoma, and fes-related
                     (Fes/Fps/Fer) proteins; cd10361"
                     /db_xref="CDD:198224"
     Site            order(467,483,503,505)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198224"
     Site            order(504,530)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198224"
     Region          564..815
                     /region_name="PTKc_Fes"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     Fes; cd05084"
                     /db_xref="CDD:270667"
     Site            order(567..569,575,588,590,607,636..639,642..643,683,
                     687..688,690,700..701,704,719..724,726,732,766,770)
                     /site_type="active"
                     /db_xref="CDD:270667"
     Site            order(567..569,575,588,590,607,636..639,642..643,687..688,
                     690,700..701)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270667"
     Site            order(683,687..688,704,719..724,726,732,766,770)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270667"
     Site            700..725
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270667"
     CDS             1..822
                     /gene="FES"
                     /coded_by="XM_061158752.1:120..2588"
                     /db_xref="GeneID:133067808"
ORIGIN      
        1 mgfsselcsp qghgavqqmq eaelrllegm rkwmaqrvks dreyagllhh mslqdsggqs
       61 rgigahspis qswteltsqt eglsrvlrqh aedlnsgpls klsllirerq qlrktyneqw
      121 qqlqqeltks hsqdieklks qyralardsa qarrkyqeag kdkdrdkakd kyvrslwklf
      181 ahhnryvlgv raaqlhhqhh hqlmlpsllq slqdlhqema cilketlqey leisslvqde
      241 vvtihremaa avariqpeae yqgflqqygs apdipprvtf deslleetel lepgelqlne
      301 ltvesvqhtl tsvtddlaaa tqtvlsrqea vtqlqrelrn eeqtthprer vqllgkkqal
      361 qealqglqva lcgqaklqaq qellqakldr lgpgepppvl llqddrhsts sseqereggr
      421 tptleilksh isgifrpkfs lppplqlvpe vqkplheqvw yhgaipraev aellthsgdf
      481 lvresqgkqe yvlsvlwdgq prhfiiqsad nlyrlegdgf psipllvdhl lrsqqpltkk
      541 sgivlnravp kdkwalshed lvlgeqigrg nfgevfsgrl radntlvavk scretlppdl
      601 kakflqeari lkqyshpniv rligvctqkq piyivmelvq ggdfltflrt egarlrvktl
      661 lqmvgdaaag meyleskcci hrdlaarncl vteknvlkis dfgmsreead gvyaasgglr
      721 qvpvkwtape alnygrysse sdvwsfgill wetfslgasp ypnlsnqqtr efvekggrlp
      781 cpelcpdavf rlmehcwaye pgqrptfsii yqelqsirkr hr
//
LOCUS       XP_061014736             801 aa            linear   MAM 02-DEC-2023
DEFINITION  furin [Dama dama].
ACCESSION   XP_061014736
VERSION     XP_061014736.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158753.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..801
                     /product="furin"
                     /calculated_mol_wt=87343
     Region          33..107
                     /region_name="S8_pro-domain"
                     /note="Peptidase S8 pro-domain; pfam16470"
                     /db_xref="CDD:465126"
     Region          113..402
                     /region_name="Peptidases_S8_Protein_convertases_Kexins_Fur
                     in-lik"
                     /note="Peptidase S8 family domain in Protein convertases;
                     cd04059"
                     /db_xref="CDD:173789"
     Site            order(115,162,208)
                     /site_type="other"
                     /note="calcium binding site 1 [ion binding]"
                     /db_xref="CDD:173789"
     Site            order(153..154,191,194,236,254,264,295,306,368)
                     /site_type="active"
                     /db_xref="CDD:173789"
     Site            order(153,194,368)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:173789"
     Site            order(301,331)
                     /site_type="other"
                     /note="calcium binding site 2 [ion binding]"
                     /db_xref="CDD:173789"
     Site            order(309,311,314,316)
                     /site_type="other"
                     /note="calcium binding site 3 [ion binding]"
                     /db_xref="CDD:173789"
     Region          484..570
                     /region_name="P_proprotein"
                     /note="Proprotein convertase P-domain; pfam01483"
                     /db_xref="CDD:460225"
     Region          584..618
                     /region_name="FU"
                     /note="Furin-like repeats; smart00261"
                     /db_xref="CDD:214589"
     Region          638..>675
                     /region_name="FU"
                     /note="Furin-like repeats; smart00261"
                     /db_xref="CDD:214589"
     CDS             1..801
                     /gene="FURIN"
                     /coded_by="XM_061158753.1:324..2729"
                     /db_xref="GeneID:133067809"
ORIGIN      
        1 melrpwlfwv vaaagalvll vadahgekvf tntwavhipg gpavadhvar khgflnlgqi
       61 fgdyyhfwhr avtkrslsph rlrhsrlqre pqvkwleqqv akrrakrdiy qeptdpkfpq
      121 qwylsgvtqr dlnvkeawaq gytgrgivvs ilddgieknh pdlagnydpg asfdvndqdp
      181 dpqprytqmn dnrhgtrcag evaavanngv cgvgvaynar iggvrmldge vtdavearsl
      241 glnpnhihiy saswgpeddg ktvdgpahla eeaffrgvsq grgglgsifv wasgnggreh
      301 dscncdgytn siytlsissa tqfgnvpwys eacsstlatt yssgnqnekq ivttdlrqkc
      361 teshtgtsas aplaagiial tleanknltw rdmqhlvvrt skpahlnand watngvgrkv
      421 shsygyglld agamvalaqn wttvapqrkc iidiltepkd igkrlevrkt vtaclgepsh
      481 itrlehaqar ltlsynrrgd laihlvspmg trstllaarp hdysadgfnd wafmtthswd
      541 edpsgewvle ientseanny gtltkftlvl ygtaaeglpt paesigcktl tssqacvvce
      601 egfslhqknc vqhcppgfap qvldthyste ndveiirasv ctpchtscat cqgpaptdcl
      661 scpshasldp verkcsrqsq ssresplqqp ppppppppgp ppaevaaepr lradllpshl
      721 pevvaglsca fivlvfvtvf lvlqlrsgfs frgvkvytmd rglisykglp peawqeecps
      781 dseedegrge rtafikdqsa l
//
LOCUS       XP_061014737             801 aa            linear   MAM 02-DEC-2023
DEFINITION  furin [Dama dama].
ACCESSION   XP_061014737
VERSION     XP_061014737.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158754.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..801
                     /product="furin"
                     /calculated_mol_wt=87343
     Region          33..107
                     /region_name="S8_pro-domain"
                     /note="Peptidase S8 pro-domain; pfam16470"
                     /db_xref="CDD:465126"
     Region          113..402
                     /region_name="Peptidases_S8_Protein_convertases_Kexins_Fur
                     in-lik"
                     /note="Peptidase S8 family domain in Protein convertases;
                     cd04059"
                     /db_xref="CDD:173789"
     Site            order(115,162,208)
                     /site_type="other"
                     /note="calcium binding site 1 [ion binding]"
                     /db_xref="CDD:173789"
     Site            order(153..154,191,194,236,254,264,295,306,368)
                     /site_type="active"
                     /db_xref="CDD:173789"
     Site            order(153,194,368)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:173789"
     Site            order(301,331)
                     /site_type="other"
                     /note="calcium binding site 2 [ion binding]"
                     /db_xref="CDD:173789"
     Site            order(309,311,314,316)
                     /site_type="other"
                     /note="calcium binding site 3 [ion binding]"
                     /db_xref="CDD:173789"
     Region          484..570
                     /region_name="P_proprotein"
                     /note="Proprotein convertase P-domain; pfam01483"
                     /db_xref="CDD:460225"
     Region          584..618
                     /region_name="FU"
                     /note="Furin-like repeats; smart00261"
                     /db_xref="CDD:214589"
     Region          638..>675
                     /region_name="FU"
                     /note="Furin-like repeats; smart00261"
                     /db_xref="CDD:214589"
     CDS             1..801
                     /gene="FURIN"
                     /coded_by="XM_061158754.1:258..2663"
                     /db_xref="GeneID:133067809"
ORIGIN      
        1 melrpwlfwv vaaagalvll vadahgekvf tntwavhipg gpavadhvar khgflnlgqi
       61 fgdyyhfwhr avtkrslsph rlrhsrlqre pqvkwleqqv akrrakrdiy qeptdpkfpq
      121 qwylsgvtqr dlnvkeawaq gytgrgivvs ilddgieknh pdlagnydpg asfdvndqdp
      181 dpqprytqmn dnrhgtrcag evaavanngv cgvgvaynar iggvrmldge vtdavearsl
      241 glnpnhihiy saswgpeddg ktvdgpahla eeaffrgvsq grgglgsifv wasgnggreh
      301 dscncdgytn siytlsissa tqfgnvpwys eacsstlatt yssgnqnekq ivttdlrqkc
      361 teshtgtsas aplaagiial tleanknltw rdmqhlvvrt skpahlnand watngvgrkv
      421 shsygyglld agamvalaqn wttvapqrkc iidiltepkd igkrlevrkt vtaclgepsh
      481 itrlehaqar ltlsynrrgd laihlvspmg trstllaarp hdysadgfnd wafmtthswd
      541 edpsgewvle ientseanny gtltkftlvl ygtaaeglpt paesigcktl tssqacvvce
      601 egfslhqknc vqhcppgfap qvldthyste ndveiirasv ctpchtscat cqgpaptdcl
      661 scpshasldp verkcsrqsq ssresplqqp ppppppppgp ppaevaaepr lradllpshl
      721 pevvaglsca fivlvfvtvf lvlqlrsgfs frgvkvytmd rglisykglp peawqeecps
      781 dseedegrge rtafikdqsa l
//
LOCUS       XP_061014738             801 aa            linear   MAM 02-DEC-2023
DEFINITION  furin [Dama dama].
ACCESSION   XP_061014738
VERSION     XP_061014738.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158755.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..801
                     /product="furin"
                     /calculated_mol_wt=87343
     Region          33..107
                     /region_name="S8_pro-domain"
                     /note="Peptidase S8 pro-domain; pfam16470"
                     /db_xref="CDD:465126"
     Region          113..402
                     /region_name="Peptidases_S8_Protein_convertases_Kexins_Fur
                     in-lik"
                     /note="Peptidase S8 family domain in Protein convertases;
                     cd04059"
                     /db_xref="CDD:173789"
     Site            order(115,162,208)
                     /site_type="other"
                     /note="calcium binding site 1 [ion binding]"
                     /db_xref="CDD:173789"
     Site            order(153..154,191,194,236,254,264,295,306,368)
                     /site_type="active"
                     /db_xref="CDD:173789"
     Site            order(153,194,368)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:173789"
     Site            order(301,331)
                     /site_type="other"
                     /note="calcium binding site 2 [ion binding]"
                     /db_xref="CDD:173789"
     Site            order(309,311,314,316)
                     /site_type="other"
                     /note="calcium binding site 3 [ion binding]"
                     /db_xref="CDD:173789"
     Region          484..570
                     /region_name="P_proprotein"
                     /note="Proprotein convertase P-domain; pfam01483"
                     /db_xref="CDD:460225"
     Region          584..618
                     /region_name="FU"
                     /note="Furin-like repeats; smart00261"
                     /db_xref="CDD:214589"
     Region          638..>675
                     /region_name="FU"
                     /note="Furin-like repeats; smart00261"
                     /db_xref="CDD:214589"
     CDS             1..801
                     /gene="FURIN"
                     /coded_by="XM_061158755.1:320..2725"
                     /db_xref="GeneID:133067809"
ORIGIN      
        1 melrpwlfwv vaaagalvll vadahgekvf tntwavhipg gpavadhvar khgflnlgqi
       61 fgdyyhfwhr avtkrslsph rlrhsrlqre pqvkwleqqv akrrakrdiy qeptdpkfpq
      121 qwylsgvtqr dlnvkeawaq gytgrgivvs ilddgieknh pdlagnydpg asfdvndqdp
      181 dpqprytqmn dnrhgtrcag evaavanngv cgvgvaynar iggvrmldge vtdavearsl
      241 glnpnhihiy saswgpeddg ktvdgpahla eeaffrgvsq grgglgsifv wasgnggreh
      301 dscncdgytn siytlsissa tqfgnvpwys eacsstlatt yssgnqnekq ivttdlrqkc
      361 teshtgtsas aplaagiial tleanknltw rdmqhlvvrt skpahlnand watngvgrkv
      421 shsygyglld agamvalaqn wttvapqrkc iidiltepkd igkrlevrkt vtaclgepsh
      481 itrlehaqar ltlsynrrgd laihlvspmg trstllaarp hdysadgfnd wafmtthswd
      541 edpsgewvle ientseanny gtltkftlvl ygtaaeglpt paesigcktl tssqacvvce
      601 egfslhqknc vqhcppgfap qvldthyste ndveiirasv ctpchtscat cqgpaptdcl
      661 scpshasldp verkcsrqsq ssresplqqp ppppppppgp ppaevaaepr lradllpshl
      721 pevvaglsca fivlvfvtvf lvlqlrsgfs frgvkvytmd rglisykglp peawqeecps
      781 dseedegrge rtafikdqsa l
//
LOCUS       XP_061014739             801 aa            linear   MAM 02-DEC-2023
DEFINITION  furin [Dama dama].
ACCESSION   XP_061014739
VERSION     XP_061014739.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158756.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..801
                     /product="furin"
                     /calculated_mol_wt=87343
     Region          33..107
                     /region_name="S8_pro-domain"
                     /note="Peptidase S8 pro-domain; pfam16470"
                     /db_xref="CDD:465126"
     Region          113..402
                     /region_name="Peptidases_S8_Protein_convertases_Kexins_Fur
                     in-lik"
                     /note="Peptidase S8 family domain in Protein convertases;
                     cd04059"
                     /db_xref="CDD:173789"
     Site            order(115,162,208)
                     /site_type="other"
                     /note="calcium binding site 1 [ion binding]"
                     /db_xref="CDD:173789"
     Site            order(153..154,191,194,236,254,264,295,306,368)
                     /site_type="active"
                     /db_xref="CDD:173789"
     Site            order(153,194,368)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:173789"
     Site            order(301,331)
                     /site_type="other"
                     /note="calcium binding site 2 [ion binding]"
                     /db_xref="CDD:173789"
     Site            order(309,311,314,316)
                     /site_type="other"
                     /note="calcium binding site 3 [ion binding]"
                     /db_xref="CDD:173789"
     Region          484..570
                     /region_name="P_proprotein"
                     /note="Proprotein convertase P-domain; pfam01483"
                     /db_xref="CDD:460225"
     Region          584..618
                     /region_name="FU"
                     /note="Furin-like repeats; smart00261"
                     /db_xref="CDD:214589"
     Region          638..>675
                     /region_name="FU"
                     /note="Furin-like repeats; smart00261"
                     /db_xref="CDD:214589"
     CDS             1..801
                     /gene="FURIN"
                     /coded_by="XM_061158756.1:299..2704"
                     /db_xref="GeneID:133067809"
ORIGIN      
        1 melrpwlfwv vaaagalvll vadahgekvf tntwavhipg gpavadhvar khgflnlgqi
       61 fgdyyhfwhr avtkrslsph rlrhsrlqre pqvkwleqqv akrrakrdiy qeptdpkfpq
      121 qwylsgvtqr dlnvkeawaq gytgrgivvs ilddgieknh pdlagnydpg asfdvndqdp
      181 dpqprytqmn dnrhgtrcag evaavanngv cgvgvaynar iggvrmldge vtdavearsl
      241 glnpnhihiy saswgpeddg ktvdgpahla eeaffrgvsq grgglgsifv wasgnggreh
      301 dscncdgytn siytlsissa tqfgnvpwys eacsstlatt yssgnqnekq ivttdlrqkc
      361 teshtgtsas aplaagiial tleanknltw rdmqhlvvrt skpahlnand watngvgrkv
      421 shsygyglld agamvalaqn wttvapqrkc iidiltepkd igkrlevrkt vtaclgepsh
      481 itrlehaqar ltlsynrrgd laihlvspmg trstllaarp hdysadgfnd wafmtthswd
      541 edpsgewvle ientseanny gtltkftlvl ygtaaeglpt paesigcktl tssqacvvce
      601 egfslhqknc vqhcppgfap qvldthyste ndveiirasv ctpchtscat cqgpaptdcl
      661 scpshasldp verkcsrqsq ssresplqqp ppppppppgp ppaevaaepr lradllpshl
      721 pevvaglsca fivlvfvtvf lvlqlrsgfs frgvkvytmd rglisykglp peawqeecps
      781 dseedegrge rtafikdqsa l
//
LOCUS       XP_061014740            1430 aa            linear   MAM 02-DEC-2023
DEFINITION  recQ-like DNA helicase BLM isoform X1 [Dama dama].
ACCESSION   XP_061014740
VERSION     XP_061014740.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158757.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1430
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1430
                     /product="recQ-like DNA helicase BLM isoform X1"
                     /calculated_mol_wt=159780
     Region          1..367
                     /region_name="BLM_N"
                     /note="N-terminal region of Bloom syndrome protein;
                     pfam16202"
                     /db_xref="CDD:465064"
     Region          371..411
                     /region_name="BDHCT"
                     /note="BDHCT (NUC031) domain; pfam08072"
                     /db_xref="CDD:462356"
     Region          425..660
                     /region_name="BDHCT_assoc"
                     /note="BDHCT-box associated domain on Bloom syndrome
                     protein; pfam16204"
                     /db_xref="CDD:465065"
     Region          670..1156
                     /region_name="recQ_fam"
                     /note="ATP-dependent DNA helicase, RecQ family; TIGR00614"
                     /db_xref="CDD:129701"
     Region          1226..1305
                     /region_name="HRDC"
                     /note="Helicase and RNase D C-terminal; smart00341"
                     /db_xref="CDD:128635"
     CDS             1..1430
                     /gene="BLM"
                     /coded_by="XM_061158757.1:109..4401"
                     /db_xref="GeneID:133067811"
ORIGIN      
        1 maavpqnnlq eqlerhsark lndksslskp kssgftfkkk vpsandvsvt svsvaktpvl
       61 sdkdvnitea fsfseplpht trqqtgindf ksapsgpqtk rvgskpllps lsqvpqevsy
      121 taqntpvikq scnatfkkle fssssdslip fsdwddiddf dtsgnskafv tpcknrfvrv
      181 staqkskksk rnlvkaqlnq tnagktglap ssseskqgrs aekqkgdsew lssdvicidd
      241 dpnseeline dtqenhslkt hlgaergnwe kkknseetel hsveksscve ldeddydidf
      301 vppspeegmt stsssslkcs smlkdldtsd kkdslntsed lskpkematq qphgetstsc
      361 earqtslqqq lvrvmdrict lvdavpddel ktldcgnell qqrdirrkll aeadfdpsda
      421 svlrslwgcr pdplespved sasvslpyaf pkgdscpagn avkeftlshl psnsmstrer
      481 lltpplgktg vsattkgpfe rplfsshlqk sfvssnwaet praekrnesl dfpgnvltst
      541 avkdqnkytt sindlerelq aaceidnfdi ddfddddddw enlmqnlaas ksstaayphi
      601 kegrpvksvs erpssaktdc lpgasttqnk nfsesilnyp dkteqnvasr npkherfqsl
      661 nfphtkemmk ifhkkfglhn frtnqleain aallgedcfi lmptgggksl cyqlpacvsp
      721 gvtivisplr slivdqvqkl tsldipatyl tgdktdseat siylqlskkd piikllyvtp
      781 ekvcasnrli stlenlyerr llarfvidea hcvsqwghdf rpdykrmnil rqkfpsvpmm
      841 altatanprv qkdiltqlki lrpqvfsmsf nrhnlkyyvl pkkpkkvafd clewirkhhp
      901 ydsgiiycls rrecdtmaet lqkdglaala yhaglsdsar devqhkwinq dgcqvicati
      961 afgmgidkpd vrfvihaslp ksvegyyqes gragrdgeis hcilfytyhd vtrlkrlilm
     1021 ekdgnrhtre thfnnlysmv hycenitecr riqllayfge nefnphfckk ypdvscdncc
     1081 ktkdfktkdv tddvknivrf vqehnssqgi rnikhigpsg rftmnmlvdi flgsksakiq
     1141 sgifgkgsty srhnaerlfk klildrilde dlyinandqp iayvmlgska qtilnghlkv
     1201 dfmetensss vkkqkalvak vsqreevvkk clgeltevck slgkvfgvhy fnifntvtlk
     1261 klaeslssdp evllqidgvt edklekygae vipilqkyse wtlpaedssp rrspsssrgt
     1321 gkntpeesde eapisshyfa nktrnerkrk rmpasqrakr rrtgfsgsrt kggsstcrrm
     1381 psktkpsnii gpsstlhasq aasgvsrklg imappkpinr pflkpsyafs
//
LOCUS       XP_061014741            1311 aa            linear   MAM 02-DEC-2023
DEFINITION  recQ-like DNA helicase BLM isoform X2 [Dama dama].
ACCESSION   XP_061014741
VERSION     XP_061014741.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158758.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1311
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1311
                     /product="recQ-like DNA helicase BLM isoform X2"
                     /calculated_mol_wt=147006
     Region          <43..248
                     /region_name="BLM_N"
                     /note="N-terminal region of Bloom syndrome protein;
                     pfam16202"
                     /db_xref="CDD:465064"
     Region          252..292
                     /region_name="BDHCT"
                     /note="BDHCT (NUC031) domain; pfam08072"
                     /db_xref="CDD:462356"
     Region          306..541
                     /region_name="BDHCT_assoc"
                     /note="BDHCT-box associated domain on Bloom syndrome
                     protein; pfam16204"
                     /db_xref="CDD:465065"
     Region          551..1037
                     /region_name="recQ_fam"
                     /note="ATP-dependent DNA helicase, RecQ family; TIGR00614"
                     /db_xref="CDD:129701"
     Region          1107..1186
                     /region_name="HRDC"
                     /note="Helicase and RNase D C-terminal; smart00341"
                     /db_xref="CDD:128635"
     CDS             1..1311
                     /gene="BLM"
                     /coded_by="XM_061158758.1:109..4044"
                     /db_xref="GeneID:133067811"
ORIGIN      
        1 maavpqnnlq eqlerhsark lndksslskp kssdwddidd fdtsgnskaf vtpcknrfvr
       61 vstaqkskks krnlvkaqln qtnagktgla pssseskqgr saekqkgdse wlssdvicid
      121 ddpnseelin edtqenhslk thlgaergnw ekkknseete lhsveksscv eldeddydid
      181 fvppspeegm tstsssslkc ssmlkdldts dkkdslntse dlskpkemat qqphgetsts
      241 cearqtslqq qlvrvmdric tlvdavpdde lktldcgnel lqqrdirrkl laeadfdpsd
      301 asvlrslwgc rpdplespve dsasvslpya fpkgdscpag navkeftlsh lpsnsmstre
      361 rlltpplgkt gvsattkgpf erplfsshlq ksfvssnwae tpraekrnes ldfpgnvlts
      421 tavkdqnkyt tsindlerel qaaceidnfd iddfdddddd wenlmqnlaa sksstaayph
      481 ikegrpvksv serpssaktd clpgasttqn knfsesilny pdkteqnvas rnpkherfqs
      541 lnfphtkemm kifhkkfglh nfrtnqleai naallgedcf ilmptgggks lcyqlpacvs
      601 pgvtivispl rslivdqvqk ltsldipaty ltgdktdsea tsiylqlskk dpiikllyvt
      661 pekvcasnrl istlenlyer rllarfvide ahcvsqwghd frpdykrmni lrqkfpsvpm
      721 maltatanpr vqkdiltqlk ilrpqvfsms fnrhnlkyyv lpkkpkkvaf dclewirkhh
      781 pydsgiiycl srrecdtmae tlqkdglaal ayhaglsdsa rdevqhkwin qdgcqvicat
      841 iafgmgidkp dvrfvihasl pksvegyyqe sgragrdgei shcilfytyh dvtrlkrlil
      901 mekdgnrhtr ethfnnlysm vhycenitec rriqllayfg enefnphfck kypdvscdnc
      961 cktkdfktkd vtddvknivr fvqehnssqg irnikhigps grftmnmlvd iflgsksaki
     1021 qsgifgkgst ysrhnaerlf kklildrild edlyinandq piayvmlgsk aqtilnghlk
     1081 vdfmetenss svkkqkalva kvsqreevvk kclgeltevc kslgkvfgvh yfnifntvtl
     1141 kklaeslssd pevllqidgv tedklekyga evipilqkys ewtlpaedss prrspsssrg
     1201 tgkntpeesd eeapisshyf anktrnerkr krmpasqrak rrrtgfsgsr tkggsstcrr
     1261 mpsktkpsni igpsstlhas qaasgvsrkl gimappkpin rpflkpsyaf s
//
LOCUS       XP_061014743            1226 aa            linear   MAM 02-DEC-2023
DEFINITION  recQ-like DNA helicase BLM isoform X3 [Dama dama].
ACCESSION   XP_061014743
VERSION     XP_061014743.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158760.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1226
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1226
                     /product="recQ-like DNA helicase BLM isoform X3"
                     /calculated_mol_wt=137596
     Region          1..367
                     /region_name="BLM_N"
                     /note="N-terminal region of Bloom syndrome protein;
                     pfam16202"
                     /db_xref="CDD:465064"
     Region          371..411
                     /region_name="BDHCT"
                     /note="BDHCT (NUC031) domain; pfam08072"
                     /db_xref="CDD:462356"
     Region          425..660
                     /region_name="BDHCT_assoc"
                     /note="BDHCT-box associated domain on Bloom syndrome
                     protein; pfam16204"
                     /db_xref="CDD:465065"
     Region          670..1156
                     /region_name="recQ_fam"
                     /note="ATP-dependent DNA helicase, RecQ family; TIGR00614"
                     /db_xref="CDD:129701"
     CDS             1..1226
                     /gene="BLM"
                     /coded_by="XM_061158760.1:109..3789"
                     /db_xref="GeneID:133067811"
ORIGIN      
        1 maavpqnnlq eqlerhsark lndksslskp kssgftfkkk vpsandvsvt svsvaktpvl
       61 sdkdvnitea fsfseplpht trqqtgindf ksapsgpqtk rvgskpllps lsqvpqevsy
      121 taqntpvikq scnatfkkle fssssdslip fsdwddiddf dtsgnskafv tpcknrfvrv
      181 staqkskksk rnlvkaqlnq tnagktglap ssseskqgrs aekqkgdsew lssdvicidd
      241 dpnseeline dtqenhslkt hlgaergnwe kkknseetel hsveksscve ldeddydidf
      301 vppspeegmt stsssslkcs smlkdldtsd kkdslntsed lskpkematq qphgetstsc
      361 earqtslqqq lvrvmdrict lvdavpddel ktldcgnell qqrdirrkll aeadfdpsda
      421 svlrslwgcr pdplespved sasvslpyaf pkgdscpagn avkeftlshl psnsmstrer
      481 lltpplgktg vsattkgpfe rplfsshlqk sfvssnwaet praekrnesl dfpgnvltst
      541 avkdqnkytt sindlerelq aaceidnfdi ddfddddddw enlmqnlaas ksstaayphi
      601 kegrpvksvs erpssaktdc lpgasttqnk nfsesilnyp dkteqnvasr npkherfqsl
      661 nfphtkemmk ifhkkfglhn frtnqleain aallgedcfi lmptgggksl cyqlpacvsp
      721 gvtivisplr slivdqvqkl tsldipatyl tgdktdseat siylqlskkd piikllyvtp
      781 ekvcasnrli stlenlyerr llarfvidea hcvsqwghdf rpdykrmnil rqkfpsvpmm
      841 altatanprv qkdiltqlki lrpqvfsmsf nrhnlkyyvl pkkpkkvafd clewirkhhp
      901 ydsgiiycls rrecdtmaet lqkdglaala yhaglsdsar devqhkwinq dgcqvicati
      961 afgmgidkpd vrfvihaslp ksvegyyqes gragrdgeis hcilfytyhd vtrlkrlilm
     1021 ekdgnrhtre thfnnlysmv hycenitecr riqllayfge nefnphfckk ypdvscdncc
     1081 ktkdfktkdv tddvknivrf vqehnssqgi rnikhigpsg rftmnmlvdi flgsksakiq
     1141 sgifgkgsty srhnaerlfk klildrilde dlyinandqp iayvmlgska qtilnghlkn
     1201 lyllilrfcf klmvlpktnw knmvlk
//
LOCUS       XP_061014744            1209 aa            linear   MAM 02-DEC-2023
DEFINITION  recQ-like DNA helicase BLM isoform X4 [Dama dama].
ACCESSION   XP_061014744
VERSION     XP_061014744.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158761.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1209
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1209
                     /product="recQ-like DNA helicase BLM isoform X4"
                     /calculated_mol_wt=135441
     Region          1..367
                     /region_name="BLM_N"
                     /note="N-terminal region of Bloom syndrome protein;
                     pfam16202"
                     /db_xref="CDD:465064"
     Region          371..411
                     /region_name="BDHCT"
                     /note="BDHCT (NUC031) domain; pfam08072"
                     /db_xref="CDD:462356"
     Region          425..660
                     /region_name="BDHCT_assoc"
                     /note="BDHCT-box associated domain on Bloom syndrome
                     protein; pfam16204"
                     /db_xref="CDD:465065"
     Region          670..1156
                     /region_name="recQ_fam"
                     /note="ATP-dependent DNA helicase, RecQ family; TIGR00614"
                     /db_xref="CDD:129701"
     CDS             1..1209
                     /gene="BLM"
                     /coded_by="XM_061158761.1:109..3738"
                     /db_xref="GeneID:133067811"
ORIGIN      
        1 maavpqnnlq eqlerhsark lndksslskp kssgftfkkk vpsandvsvt svsvaktpvl
       61 sdkdvnitea fsfseplpht trqqtgindf ksapsgpqtk rvgskpllps lsqvpqevsy
      121 taqntpvikq scnatfkkle fssssdslip fsdwddiddf dtsgnskafv tpcknrfvrv
      181 staqkskksk rnlvkaqlnq tnagktglap ssseskqgrs aekqkgdsew lssdvicidd
      241 dpnseeline dtqenhslkt hlgaergnwe kkknseetel hsveksscve ldeddydidf
      301 vppspeegmt stsssslkcs smlkdldtsd kkdslntsed lskpkematq qphgetstsc
      361 earqtslqqq lvrvmdrict lvdavpddel ktldcgnell qqrdirrkll aeadfdpsda
      421 svlrslwgcr pdplespved sasvslpyaf pkgdscpagn avkeftlshl psnsmstrer
      481 lltpplgktg vsattkgpfe rplfsshlqk sfvssnwaet praekrnesl dfpgnvltst
      541 avkdqnkytt sindlerelq aaceidnfdi ddfddddddw enlmqnlaas ksstaayphi
      601 kegrpvksvs erpssaktdc lpgasttqnk nfsesilnyp dkteqnvasr npkherfqsl
      661 nfphtkemmk ifhkkfglhn frtnqleain aallgedcfi lmptgggksl cyqlpacvsp
      721 gvtivisplr slivdqvqkl tsldipatyl tgdktdseat siylqlskkd piikllyvtp
      781 ekvcasnrli stlenlyerr llarfvidea hcvsqwghdf rpdykrmnil rqkfpsvpmm
      841 altatanprv qkdiltqlki lrpqvfsmsf nrhnlkyyvl pkkpkkvafd clewirkhhp
      901 ydsgiiycls rrecdtmaet lqkdglaala yhaglsdsar devqhkwinq dgcqvicati
      961 afgmgidkpd vrfvihaslp ksvegyyqes gragrdgeis hcilfytyhd vtrlkrlilm
     1021 ekdgnrhtre thfnnlysmv hycenitecr riqllayfge nefnphfckk ypdvscdncc
     1081 ktkdfktkdv tddvknivrf vqehnssqgi rnikhigpsg rftmnmlvdi flgsksakiq
     1141 sgifgkgsty srhnaerlfk klildrilde dlyinandqp iayvmlgska qtilnghlkt
     1201 swkrkipav
//
LOCUS       XP_061014745             619 aa            linear   MAM 02-DEC-2023
DEFINITION  CREB-regulated transcription coactivator 3 isoform X1 [Dama dama].
ACCESSION   XP_061014745
VERSION     XP_061014745.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158762.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..619
                     /product="CREB-regulated transcription coactivator 3
                     isoform X1"
                     /calculated_mol_wt=66552
     Region          11..64
                     /region_name="TORC_N"
                     /note="Transducer of regulated CREB activity, N terminus;
                     pfam12884"
                     /db_xref="CDD:463738"
     Region          159..321
                     /region_name="TORC_M"
                     /note="Transducer of regulated CREB activity middle
                     domain; pfam12885"
                     /db_xref="CDD:463739"
     Region          <332..530
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          545..619
                     /region_name="TORC_C"
                     /note="Transducer of regulated CREB activity, C terminus;
                     pfam12886"
                     /db_xref="CDD:463740"
     CDS             1..619
                     /gene="CRTC3"
                     /coded_by="XM_061158762.1:46..1905"
                     /db_xref="GeneID:133067812"
ORIGIN      
        1 maaspgsgsa nprkfsekia lhtqrqaeet rafeqlmtdl tlsrvqfqkl qqlrltqyhg
       61 gslpnvsqlr ssapefqpaf hpadsvrgtr hhglverpsr trfhplhrrs gdkpgrqfdg
      121 salganyssq pldeswprqq ppwkeekhpg frltsalnrt nsdsalhtsa lstkpqdpyg
      181 gggqsawpas yvgfcdgehd vhgevvsfpg plreenllnv pkplpkqlwe tkeiqslsgr
      241 prscdvgggs tfphngqnmg lspflgtlnt ggslpdltnl hysaplpasl dtgdhlfgsm
      301 svgnsvgnlp aamthlgirg ssglqssrsn psiqatlskt vlsssfnshp easapsasal
      361 hpslrhfsls npslsttsls gpsrrrqppv spltlspgpe ahqgfsrqls stsplnpypa
      421 sqmvssdrsp lsflpteaqa qvsppppypa thdlpqpllp qphaqeppaq qpqvasslpq
      481 sdfplltaqg ssltsffpdv sfdqqsmrpg paltqqvplv qqspqepqds fhlrpnlysn
      541 cgnfpntvlt edsstslfkd lssalagmpe vslsvdtpfp leeelqiepl sldglnmlsd
      601 ssmglldpsv eetfradrl
//
LOCUS       XP_061014746             618 aa            linear   MAM 02-DEC-2023
DEFINITION  CREB-regulated transcription coactivator 3 isoform X2 [Dama dama].
ACCESSION   XP_061014746
VERSION     XP_061014746.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158763.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..618
                     /product="CREB-regulated transcription coactivator 3
                     isoform X2"
                     /calculated_mol_wt=66423
     Region          11..64
                     /region_name="TORC_N"
                     /note="Transducer of regulated CREB activity, N terminus;
                     pfam12884"
                     /db_xref="CDD:463738"
     Region          159..321
                     /region_name="TORC_M"
                     /note="Transducer of regulated CREB activity middle
                     domain; pfam12885"
                     /db_xref="CDD:463739"
     Region          <332..565
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          545..618
                     /region_name="TORC_C"
                     /note="Transducer of regulated CREB activity, C terminus;
                     pfam12886"
                     /db_xref="CDD:463740"
     CDS             1..618
                     /gene="CRTC3"
                     /coded_by="XM_061158763.1:46..1902"
                     /db_xref="GeneID:133067812"
ORIGIN      
        1 maaspgsgsa nprkfsekia lhtqrqaeet rafeqlmtdl tlsrvqfqkl qqlrltqyhg
       61 gslpnvsqlr ssapefqpaf hpadsvrgtr hhglverpsr trfhplhrrs gdkpgrqfdg
      121 salganyssq pldeswprqq ppwkeekhpg frltsalnrt nsdsalhtsa lstkpqdpyg
      181 gggqsawpas yvgfcdgehd vhgevvsfpg plreenllnv pkplpkqlwe tkeiqslsgr
      241 prscdvgggs tfphngqnmg lspflgtlnt ggslpdltnl hysaplpasl dtgdhlfgsm
      301 svgnsvgnlp aamthlgirg ssglqssrsn psiqatlskt vlsssfnshp easapsasal
      361 hpslrhfsls npslsttsls gpsrrrqppv spltlspgpe ahqgfsrqls stsplnpypa
      421 sqmvssdrsp lsflpteaqa qvsppppypa thdlpqpllp qphaqeppaq qpqvasslpq
      481 sdfplltaqg ssltsffpdv sfdqqsmrpg paltqqvplv qqspqepqds fhlrpnlysn
      541 cgnfpntvlt dsstslfkdl ssalagmpev slsvdtpfpl eeelqiepls ldglnmlsds
      601 smglldpsve etfradrl
//
LOCUS       XP_061014747             538 aa            linear   MAM 02-DEC-2023
DEFINITION  CREB-regulated transcription coactivator 3 isoform X3 [Dama dama].
ACCESSION   XP_061014747
VERSION     XP_061014747.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158764.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..538
                     /product="CREB-regulated transcription coactivator 3
                     isoform X3"
                     /calculated_mol_wt=57630
     Region          11..64
                     /region_name="TORC_N"
                     /note="Transducer of regulated CREB activity, N terminus;
                     pfam12884"
                     /db_xref="CDD:463738"
     Region          159..321
                     /region_name="TORC_M"
                     /note="Transducer of regulated CREB activity middle
                     domain; pfam12885"
                     /db_xref="CDD:463739"
     Region          <349..485
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..538
                     /gene="CRTC3"
                     /coded_by="XM_061158764.1:47..1663"
                     /db_xref="GeneID:133067812"
ORIGIN      
        1 maaspgsgsa nprkfsekia lhtqrqaeet rafeqlmtdl tlsrvqfqkl qqlrltqyhg
       61 gslpnvsqlr ssapefqpaf hpadsvrgtr hhglverpsr trfhplhrrs gdkpgrqfdg
      121 salganyssq pldeswprqq ppwkeekhpg frltsalnrt nsdsalhtsa lstkpqdpyg
      181 gggqsawpas yvgfcdgehd vhgevvsfpg plreenllnv pkplpkqlwe tkeiqslsgr
      241 prscdvgggs tfphngqnmg lspflgtlnt ggslpdltnl hysaplpasl dtgdhlfgsm
      301 svgnsvgnlp aamthlgirg ssglqssrsn psiqatlskt vlsssfnshp easapsasal
      361 hpslrhfsls npslsttsls gpsrrrqppv spltlspgpe ahqgfsrqls stsplnpypa
      421 sqmvssdrsp lsflpteaqa qvsppppypa thdlpqpllp qphaqeppaq qpqvasslpq
      481 sdfplltaqg ssltsffpdv sfdqqsmrpg paltqqktra pacsktsavr wqacprsa
//
LOCUS       XP_061014748             158 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein uL23-like [Dama dama].
ACCESSION   XP_061014748
VERSION     XP_061014748.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158765.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..158
                     /product="large ribosomal subunit protein uL23-like"
                     /calculated_mol_wt=17819
     Region          38..158
                     /region_name="PTZ00191"
                     /note="60S ribosomal protein L23a; Provisional"
                     /db_xref="CDD:185507"
     CDS             1..158
                     /gene="LOC133067813"
                     /coded_by="XM_061158765.1:26..502"
                     /db_xref="GeneID:133067813"
ORIGIN      
        1 mkiapkakke apappkaeak akalkakkav lkgvhshkkk kirtsptfrr pktlrlrrqp
       61 kyprksaprr nkldhyaiik fplttesamk kiednntlvf ivdvkankhq ikqavkklyd
      121 idvakvktli rpdgekkayv rlapdydald vankigii
//
LOCUS       XP_061014749            1657 aa            linear   MAM 02-DEC-2023
DEFINITION  ras GTPase-activating-like protein IQGAP1 [Dama dama].
ACCESSION   XP_061014749
VERSION     XP_061014749.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158766.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1657
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1657
                     /product="ras GTPase-activating-like protein IQGAP1"
                     /calculated_mol_wt=189058
     Region          37..190
                     /region_name="CH_IQGAP1"
                     /note="calponin homology (CH) domain found in Ras
                     GTPase-activating-like protein IQGAP1; cd21274"
                     /db_xref="CDD:409123"
     Site            order(46,50,111,113..114,117..118,120,130..138,144,
                     146..147,149..150,153..154,157)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409123"
     Region          685..712
                     /region_name="WW"
                     /note="Two conserved tryptophans domain; also known as the
                     WWP or rsp5 domain; around 40 amino acids; functions as an
                     interaction module in a diverse set of signalling
                     proteins; binds specific proline-rich sequences but at low
                     affinities compared to other...; cd00201"
                     /db_xref="CDD:238122"
     Site            order(696,707)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          774..796
                     /region_name="IQ"
                     /note="Calmodulin-binding motif; smart00015"
                     /db_xref="CDD:197470"
     Region          <876..1657
                     /region_name="IQG1"
                     /note="Protein involved in regulation of cellular
                     morphogenesis/cytokinesis [Cell division and chromosome
                     partitioning / Signal transduction mechanisms]; COG5261"
                     /db_xref="CDD:227586"
     Region          1003..1382
                     /region_name="RasGAP_IQGAP1"
                     /note="Ras-GTPase Activating Domain of IQ motif containing
                     GTPase activating protein 1; cd05133"
                     /db_xref="CDD:213335"
     Site            order(1047,1078,1080,1082..1083,1086,1089,1093,1185,
                     1193..1194,1197..1198,1201,1226,1229..1230,1233,1237,1239,
                     1244..1245)
                     /site_type="other"
                     /note="putative RAS interface [polypeptide binding]"
                     /db_xref="CDD:213335"
     CDS             1..1657
                     /gene="IQGAP1"
                     /coded_by="XM_061158766.1:101..5074"
                     /db_xref="GeneID:133067814"
ORIGIN      
        1 mssadevdgl gvarphygsv ldnerltaee mderrrqnva yeylchleea krwmeaclge
       61 dlppttelee glrngvylak lgnffspkvv slkkiydreq trykatglhf rhtdnviqwl
      121 namgeiglpk ifypettdiy drknmprciy cihalslylf klglapqiqd lygkvdftee
      181 einnmkiele kygiqmpafs kiggilanel svdeaalhaa viaineaidh ripadtftal
      241 knpnamlvnl eeclastyqd vlyqakqdkm anaknrtess ererdvyeel ltqaeiqgni
      301 nkvnllaalt nidlaleqgs apalfkilqs palglrglqq qnsdwylkql lsdreqkrqg
      361 gqteplqkee lqsgvdaant aaqqyqrrla avaainaaiq kgvaektvle lmnpeaqlpq
      421 vypfaaelyq kelatlqhqs pehslthpel svavemlssv alinralesg dmntvwkqls
      481 ssvtgltnie eencqrylde lmklkaqara ennefitwnd iqasvdhvnl vvqeeheril
      541 aiglineald egdaqktlqa lqipaakleg vladvaqhyq dtlirakrek aqetqdesav
      601 lwldeiqggi wqsnkdtqea qkfalgifai neavekgdvs ktlsalrspd vglygvipec
      661 getyqsdlae akkkklaagd nnskwvkhwv kggyyyyhnl etqeggwdep sdfvqnsmql
      721 sreeiqssis gvtaaynreq lwlaneglit klqaccrgyl vrqefrsrmn flkkqipait
      781 ciqsqwrgyk qkkayqdrla ylrshkdevi kiqslarmhq arkryrerlq yfrdhindii
      841 kiqafirank arddyktlis aedppmivvr kfvhlldqsd qdfqeeldlm kmreevitli
      901 rsnqqlendl nlmdikigll vknkitlqdv vshskkltkk nkeqlsdmmm lnkqkgglka
      961 lskekrekle ayqhlfyllq tnptylakli fqmpqnkstk fmdsviftly nyasnqreey
     1021 lllrlfktal qeeikskvdq iqeivtgnpt vikmvvsfnr gargqnalrq ilapvvkeim
     1081 ddktlniktd pvdiykswvn qmesqtgeas klpydvtpeq alsheevrtr ldnsirnmra
     1141 vtdkflaaii ssvdkipygm rfiakvlkds lhekfpdage dellkiignl lyyrymnpai
     1201 vapdafdiid lsaggqlttd qrrnlgsiak mlqhaasnkm flgdnahlsi ineylsqsyq
     1261 kfrrffqtac dvpelqdkfn vdeysdlvtl tkpviyisig eiinthtlll dhqdaiapeh
     1321 ndpihelldd lgevptiesl igegagnlnd pnkealakte vsltltnkfd vpgdenaemd
     1381 artillntkr livdvirfqp getlteilet patseqeaeh qramqrrair daktpdkmkk
     1441 sktikedsnl slqekkekiq sglkkltelg tvdpknryqe lindiardir nqrryrqrrk
     1501 aelvklqqty aalnskatfy geqvdyyksy iktcldnlas kgkvskkpre mkgkkskkis
     1561 lkytaarlhe kgvlleiedl qvnqfknvif eispteevgd fevkakfmgv qmetfmlhyq
     1621 dllqlqyegv avmklfdrak vnvnllifll nkkfyek
//
LOCUS       XP_061014750             483 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 774 [Dama dama].
ACCESSION   XP_061014750
VERSION     XP_061014750.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158767.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..483
                     /product="zinc finger protein 774"
                     /calculated_mol_wt=54927
     Region          153..483
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          153..173
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(158,160,162,164..165,168..169,172,186,188,192..193,
                     196..197,200,214,216,218,220..221,224..225,228)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          181..201
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(181,184,197,201)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          209..229
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          237..257
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          265..285
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          293..313
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          321..341
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          349..369
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(354,356,358,360..361,364..365,368,382,384,388..389,
                     392..393,396,410,412,414,416..417,420..421,424)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          377..397
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(377,380,393,397)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          405..425
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          433..453
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          461..481
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..483
                     /gene="ZNF774"
                     /coded_by="XM_061158767.1:278..1729"
                     /db_xref="GeneID:133067815"
ORIGIN      
        1 mwlgtsgtsg lpghclespl qgyrpaqiqe wapkgiskps visqleqkee awvlplqnfe
       61 arkilresht efkhqvvqld qdvsetaepc gtssegankd ispppswggn werglelegq
      121 hgtllgegqq gpfsqekeln kllegyigkk lvcvecgrsf nqssylirhr rthtgerpyk
      181 cmecgkgfkq ssdlithrrt htgekpyqch rcekkfsdss tlikhqrtht gerphqcpec
      241 gktfarkphl tvhqrthtge kpyvclqchk sfsrssnfit hqrthtgvkp yrcrdcgesf
      301 gqssdlikhq rthtgerpfk cpecgkgfrd sshfvahmst hsgerpfscp ychksfsqss
      361 hlvthqrtht gerpfkcdgc gkgfadssal vkhqrihtge rpykcgecgk sfnqsshfit
      421 hqrihlgdrp yrcpecgktf nqrshflthq rthtgekpfh csecdksfrq kahllchqnt
      481 hlm
//
LOCUS       XP_061014751             615 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger and SCAN domain-containing protein 2 isoform X1 [Dama
            dama].
ACCESSION   XP_061014751
VERSION     XP_061014751.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158768.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..615
                     /product="zinc finger and SCAN domain-containing protein 2
                     isoform X1"
                     /calculated_mol_wt=69256
     Region          70..>134
                     /region_name="SCAN"
                     /note="leucine rich region; smart00431"
                     /db_xref="CDD:128708"
     Region          221..601
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          225..245
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          253..273
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(258,260,262,264..265,268..269,272,286,288,292..293,
                     296..297,300,314,316,318,320..321,324..325,328)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          281..301
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(281,284,297,301)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          309..329
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          337..357
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          365..385
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(370,372,374,376..377,380..381,384,398,400,404..405,
                     408..409,412,426,428,430,432..433,436..437,440)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          393..413
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(393,396,409,413)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          421..441
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          449..469
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(454,456,458,460..461,464..465,468,482,484,488..489,
                     492..493,496,510,512,514,516..517,520..521,524)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          477..497
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(477,480,493,497)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          505..525
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          533..553
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(538,540,542,544..545,548..549,552,566,568,572..573,
                     576..577,580,594,596,598,600..601,604..605,608)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          561..581
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(561,564,577,581)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          589..609
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..615
                     /gene="ZSCAN2"
                     /coded_by="XM_061158768.1:232..2079"
                     /db_xref="GeneID:133067816"
ORIGIN      
        1 mmasegprvt apqspvvrlp reeddqveev atmileddsw vqeavlqedg pepepfpqga
       61 gkgsphedva ggpqgalsrl relcrrwlrp emhtkeqmlt vlpreiqawl qehrpesgee
      121 avalvedltq tlrdsdfeiq sengessnqd mfedveshem fsdvpdgegi pqsdwesdve
      181 rdcnpqgprr ntprkdrgvv papgreagql iglqgtylge kpyecpqcgk tfsrkshlit
      241 herthtgeks ykcdecgksf sdgsnfsrhq tthtgekpyk crdcgksfsr sanlithqri
      301 htgekpfrca ecgksfsrsp nliahqrtht gekpyscpec gksfgnrssl nthqgihtge
      361 kpyeckecge sfsynsnlir hqrihtgekp ykcpdcgqrf sqssalithr rthtgekpyq
      421 cgecgksfsr ssnlathrrt hlvekpykcg ecgksfsqss sliahqgtht gekpyecrtc
      481 gesfswssnl lkhqrihtge kpykcgecgk gfsqrsqlvv hqrthtgekp ykclmcgksf
      541 srgsilvmhq rahrgdkpyr cpecgkgfsw nsvliihqri htgekpykcp dcgkgfsnss
      601 nfithqrthl kekly
//
LOCUS       XP_061014752             165 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger and SCAN domain-containing protein 2 isoform X2 [Dama
            dama].
ACCESSION   XP_061014752
VERSION     XP_061014752.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158769.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..165
                     /product="zinc finger and SCAN domain-containing protein 2
                     isoform X2"
                     /calculated_mol_wt=18301
     Region          72..134
                     /region_name="SCAN"
                     /note="SCAN domain; pfam02023"
                     /db_xref="CDD:460417"
     CDS             1..165
                     /gene="ZSCAN2"
                     /coded_by="XM_061158769.1:232..729"
                     /db_xref="GeneID:133067816"
ORIGIN      
        1 mmasegprvt apqspvvrlp reeddqveev atmileddsw vqeavlqedg pepepfpqga
       61 gkgsphedva ggpqgalsrl relcrrwlrp emhtkeqmlt vlpreiqawl qehrpesgee
      121 avalvedltq tlrdsghgdd vtarsedqmn rshkvelgas hkseq
//
LOCUS       XP_061014753             160 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger and SCAN domain-containing protein 2 isoform X3 [Dama
            dama].
ACCESSION   XP_061014753
VERSION     XP_061014753.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158770.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..160
                     /product="zinc finger and SCAN domain-containing protein 2
                     isoform X3"
                     /calculated_mol_wt=17773
     Region          72..134
                     /region_name="SCAN"
                     /note="SCAN domain; pfam02023"
                     /db_xref="CDD:460417"
     CDS             1..160
                     /gene="ZSCAN2"
                     /coded_by="XM_061158770.1:232..714"
                     /db_xref="GeneID:133067816"
ORIGIN      
        1 mmasegprvt apqspvvrlp reeddqveev atmileddsw vqeavlqedg pepepfpqga
       61 gkgsphedva ggpqgalsrl relcrrwlrp emhtkeqmlt vlpreiqawl qehrpesgee
      121 avalvedltq tlrdsdsgrs lqrdrafslf hlhgsccspt
//
LOCUS       XP_061014754             370 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 73 [Dama dama].
ACCESSION   XP_061014754
VERSION     XP_061014754.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158771.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..370
                     /product="WD repeat-containing protein 73"
                     /calculated_mol_wt=40148
     Region          282..320
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..370
                     /gene="WDR73"
                     /coded_by="XM_061158771.1:59..1171"
                     /db_xref="GeneID:133067817"
ORIGIN      
        1 mepaedwlve slrlyqdfha fdlsgatrvl ewigdkgilv agheslkkne ilhlilplrl
       61 svkenqglfp erdfkvqhgg fsdrsvfdlk hvpdtrllvt sgppgcnlqv wqlaedsdvi
      121 ravstmdvhe sdgplwprva vfpsvapgil hgarlsslkv vdldsqktty tsgvsdddvl
      181 sslqvldtdt fafccssgrl glvdtrqkwa psenlgpgpg sagrwwcaea ggrgpgpsia
      241 rlgsegqlcl ldprdlcqpv ssvqcpvstp spepellrvt wapgldncla isgfdgtvqv
      301 ydvtswagvg hqveplfthr ghiflddsgm dpaplvttht whpykprtvl saasdaslhv
      361 wdwvdpcash
//
LOCUS       XP_061014755             179 aa            linear   MAM 02-DEC-2023
DEFINITION  signal peptidase complex catalytic subunit SEC11A isoform X1 [Dama
            dama].
ACCESSION   XP_061014755
VERSION     XP_061014755.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158772.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..179
                     /product="signal peptidase complex catalytic subunit
                     SEC11A isoform X1"
                     /calculated_mol_wt=20494
     Region          38..>150
                     /region_name="Peptidase_S24_S26"
                     /note="The S24, S26 LexA/signal peptidase superfamily
                     contains LexA-related and type I signal peptidase
                     families. The S24 LexA protein domains include: the lambda
                     repressor CI/C2 family and related bacterial prophage
                     repressor proteins; LexA (EC 3.4.21.88), the...; cl10465"
                     /db_xref="CDD:447902"
     Site            order(56,96)
                     /site_type="active"
                     /note="Catalytic site [active]"
                     /db_xref="CDD:119398"
     CDS             1..179
                     /gene="SEC11A"
                     /coded_by="XM_061158772.1:220..759"
                     /db_xref="GeneID:133067818"
ORIGIN      
        1 mlsldflddv rrmnkrqlyy qvlnfgmivs salmiwkglm vitgsespiv vvlsgsmepa
       61 fhrgdllflt nrvedpirvg eivvfriegr eipivhrvlk ihekqnghik fltkgdnnav
      121 ddrglykqgq hwlekkdvvg rargfvpyig ivtilmndyp kfkyavlfll glfvlvhre
//
LOCUS       XP_061014756             153 aa            linear   MAM 02-DEC-2023
DEFINITION  signal peptidase complex catalytic subunit SEC11A isoform X2 [Dama
            dama].
ACCESSION   XP_061014756
VERSION     XP_061014756.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158773.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..153
                     /product="signal peptidase complex catalytic subunit
                     SEC11A isoform X2"
                     /calculated_mol_wt=17276
     Region          12..>124
                     /region_name="Peptidase_S24_S26"
                     /note="The S24, S26 LexA/signal peptidase superfamily
                     contains LexA-related and type I signal peptidase
                     families. The S24 LexA protein domains include: the lambda
                     repressor CI/C2 family and related bacterial prophage
                     repressor proteins; LexA (EC 3.4.21.88), the...; cl10465"
                     /db_xref="CDD:447902"
     Site            order(30,70)
                     /site_type="active"
                     /note="Catalytic site [active]"
                     /db_xref="CDD:119398"
     CDS             1..153
                     /gene="SEC11A"
                     /coded_by="XM_061158773.1:50..511"
                     /db_xref="GeneID:133067818"
ORIGIN      
        1 mivssalmiw kglmvitgse spivvvlsgs mepafhrgdl lfltnrvedp irvgeivvfr
       61 iegreipivh rvlkihekqn ghikfltkgd nnavddrgly kqgqhwlekk dvvgrargfv
      121 pyigivtilm ndypkfkyav lfllglfvlv hre
//
LOCUS       XP_061014757             150 aa            linear   MAM 02-DEC-2023
DEFINITION  signal peptidase complex catalytic subunit SEC11A isoform X3 [Dama
            dama].
ACCESSION   XP_061014757
VERSION     XP_061014757.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158774.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..150
                     /product="signal peptidase complex catalytic subunit
                     SEC11A isoform X3"
                     /calculated_mol_wt=17220
     Region          38..>122
                     /region_name="Peptidase_S24_S26"
                     /note="The S24, S26 LexA/signal peptidase superfamily
                     contains LexA-related and type I signal peptidase
                     families. The S24 LexA protein domains include: the lambda
                     repressor CI/C2 family and related bacterial prophage
                     repressor proteins; LexA (EC 3.4.21.88), the...; cl10465"
                     /db_xref="CDD:447902"
     Site            order(56,96)
                     /site_type="active"
                     /note="Catalytic site [active]"
                     /db_xref="CDD:119398"
     CDS             1..150
                     /gene="SEC11A"
                     /coded_by="XM_061158774.1:221..673"
                     /db_xref="GeneID:133067818"
ORIGIN      
        1 mlsldflddv rrmnkrqlyy qvlnfgmivs salmiwkglm vitgsespiv vvlsgsmepa
       61 fhrgdllflt nrvedpirvg eivvfriegr eipivhrvlk ihekqnghik fltkgdnnav
      121 ddrglykqgq hwlekkdvvg rargfyqenr
//
LOCUS       XP_061014758             139 aa            linear   MAM 02-DEC-2023
DEFINITION  signal peptidase complex catalytic subunit SEC11A isoform X4 [Dama
            dama].
ACCESSION   XP_061014758
VERSION     XP_061014758.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158775.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..139
                     /product="signal peptidase complex catalytic subunit
                     SEC11A isoform X4"
                     /calculated_mol_wt=15962
     Region          38..>103
                     /region_name="Peptidase_S24_S26"
                     /note="The S24, S26 LexA/signal peptidase superfamily
                     contains LexA-related and type I signal peptidase
                     families. The S24 LexA protein domains include: the lambda
                     repressor CI/C2 family and related bacterial prophage
                     repressor proteins; LexA (EC 3.4.21.88), the...; cl10465"
                     /db_xref="CDD:447902"
     Site            order(56,96)
                     /site_type="active"
                     /note="Catalytic site [active]"
                     /db_xref="CDD:119398"
     CDS             1..139
                     /gene="SEC11A"
                     /coded_by="XM_061158775.1:225..644"
                     /db_xref="GeneID:133067818"
ORIGIN      
        1 mlsldflddv rrmnkrqlyy qvlnfgmivs salmiwkglm vitgsespiv vvlsgsmepa
       61 fhrgdllflt nrvedpirvg eivvfriegr eipivhrvlk ihekfvpyig ivtilmndyp
      121 kfkyavlfll glfvlvhre
//
LOCUS       XP_061014759             123 aa            linear   MAM 02-DEC-2023
DEFINITION  signal peptidase complex catalytic subunit SEC11A isoform X5 [Dama
            dama].
ACCESSION   XP_061014759
VERSION     XP_061014759.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158776.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..123
                     /product="signal peptidase complex catalytic subunit
                     SEC11A isoform X5"
                     /calculated_mol_wt=14189
     Region          <1..>94
                     /region_name="Peptidase_S24_S26"
                     /note="The S24, S26 LexA/signal peptidase superfamily
                     contains LexA-related and type I signal peptidase
                     families. The S24 LexA protein domains include: the lambda
                     repressor CI/C2 family and related bacterial prophage
                     repressor proteins; LexA (EC 3.4.21.88), the...; cl10465"
                     /db_xref="CDD:447902"
     CDS             1..123
                     /gene="SEC11A"
                     /coded_by="XM_061158776.1:283..654"
                     /db_xref="GeneID:133067818"
ORIGIN      
        1 mepafhrgdl lfltnrvedp irvgeivvfr iegreipivh rvlkihekqn ghikfltkgd
       61 nnavddrgly kqgqhwlekk dvvgrargfv pyigivtilm ndypkfkyav lfllglfvlv
      121 hre
//
LOCUS       XP_061014760            1265 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 592 [Dama dama].
ACCESSION   XP_061014760
VERSION     XP_061014760.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158777.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1265
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1265
                     /product="zinc finger protein 592"
                     /calculated_mol_wt=136437
     Region          <252..>452
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          750..770
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          778..795
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          993..1013
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(998,1000,1002,1004..1005,1008..1009,1012,1028,1030,
                     1034..1035,1038..1039,1043,1058,1063,1065,1067..1068,
                     1071..1072)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          1023..1044
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1023,1026,1039,1044)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          1053..1073
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1159..1185
                     /region_name="zf-C2H2_11"
                     /note="zinc-finger C2H2-type; pfam16622"
                     /db_xref="CDD:465205"
     CDS             1..1265
                     /gene="ZNF592"
                     /coded_by="XM_061158777.1:291..4088"
                     /db_xref="GeneID:133067819"
ORIGIN      
        1 mgdmktpdfd dllaafdipd ptsldakeai qtpseenesp lkppglcvde nvslshsgsa
       61 sdvpavsviv kntsrqesfe aekdhiapsl lhngfrgsdl padphslghn cgkfdstfmn
      121 gdstrgfpgk leaskseplp tfnqfspiss pepedaikdn gfgmkpkhsd syfppppgcg
      181 svegpvleal tkfpvpelhm fdhfckkepk peplplgsph eherggqkal evhkeldasr
      241 ffgdaldfss hpgnsigepk glaselgsgs avpprqrlkp ahsklsscva alvalqakrv
      301 anvakedqps htkdpsgpak egskgspkmp kspksprspl eatrkstkps dsprsicsds
      361 sskgspsvaa ssppaipkvr iktiktssge ikrtvtrilp dpddpskspv gsplgsatte
      421 apseapedea ttlsgvehfa evgahpgspq sdrkgeecta kasepspscc ssgawgpkga
      481 asgtqagrkp qqspappast papanllpka vhlanlnlvp hsvaasvtak ssaqrrsqpq
      541 ptqmsvplvh qvkkaaplvv evfnkvlhss npvplyapnl sppadsrihv pasgycclec
      601 gdafaleksl sqhygrrsvh ievlctlcsq tllffnkcsl lrhardhksk glvmqcsqll
      661 vkpisadqmf vstsgnstap aaaaspspsq pgpasnnast plpalplypd pvrlirhsik
      721 clechkqmrd ymamaahfqr tteetegltc qvcqmllpnq csfcahqrih ahkspyccpe
      781 cgalcrsayf qthvkenclh yarkvgyrci hcgvvhltla llkshiqerh cqvfhkcafc
      841 pmafktarst adhsatqhpt qphrpsqliy kcscemvfnk krhiqqhfyq nastaqvgvf
      901 kcpecpllfl qkpelmqhvk sthgvprnvd elsslqsstd sssgrpgprv paeppapsvt
      961 argsalpssr wgrpeahrra earprlrntg wtcqecqewv pdresyvshm kkshgrtlkr
     1021 ypcrqceqsf htpnslrkhi rnnhdtvkkv ytcgycteds psfprpslle shislmhgir
     1081 npdlsqtska rpsgghspqv nhlkrpvsgv gaapdtsngt pvsstkrhks lfqcakcsfa
     1141 tdsglefqsh ipqhqkdsst aqcllcglcy tsagslsrhl fivhkvrdqe eeeaeaaepe
     1201 egsgeevsme trengleega eeplvgdset grslglaqde dgaqdassrp qtsqdrdslt
     1261 pspqv
//
LOCUS       XP_061014761            1265 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 592 [Dama dama].
ACCESSION   XP_061014761
VERSION     XP_061014761.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158778.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1265
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1265
                     /product="zinc finger protein 592"
                     /calculated_mol_wt=136437
     Region          <252..>452
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          750..770
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          778..795
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          993..1013
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(998,1000,1002,1004..1005,1008..1009,1012,1028,1030,
                     1034..1035,1038..1039,1043,1058,1063,1065,1067..1068,
                     1071..1072)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          1023..1044
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1023,1026,1039,1044)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          1053..1073
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1159..1185
                     /region_name="zf-C2H2_11"
                     /note="zinc-finger C2H2-type; pfam16622"
                     /db_xref="CDD:465205"
     CDS             1..1265
                     /gene="ZNF592"
                     /coded_by="XM_061158778.1:543..4340"
                     /db_xref="GeneID:133067819"
ORIGIN      
        1 mgdmktpdfd dllaafdipd ptsldakeai qtpseenesp lkppglcvde nvslshsgsa
       61 sdvpavsviv kntsrqesfe aekdhiapsl lhngfrgsdl padphslghn cgkfdstfmn
      121 gdstrgfpgk leaskseplp tfnqfspiss pepedaikdn gfgmkpkhsd syfppppgcg
      181 svegpvleal tkfpvpelhm fdhfckkepk peplplgsph eherggqkal evhkeldasr
      241 ffgdaldfss hpgnsigepk glaselgsgs avpprqrlkp ahsklsscva alvalqakrv
      301 anvakedqps htkdpsgpak egskgspkmp kspksprspl eatrkstkps dsprsicsds
      361 sskgspsvaa ssppaipkvr iktiktssge ikrtvtrilp dpddpskspv gsplgsatte
      421 apseapedea ttlsgvehfa evgahpgspq sdrkgeecta kasepspscc ssgawgpkga
      481 asgtqagrkp qqspappast papanllpka vhlanlnlvp hsvaasvtak ssaqrrsqpq
      541 ptqmsvplvh qvkkaaplvv evfnkvlhss npvplyapnl sppadsrihv pasgycclec
      601 gdafaleksl sqhygrrsvh ievlctlcsq tllffnkcsl lrhardhksk glvmqcsqll
      661 vkpisadqmf vstsgnstap aaaaspspsq pgpasnnast plpalplypd pvrlirhsik
      721 clechkqmrd ymamaahfqr tteetegltc qvcqmllpnq csfcahqrih ahkspyccpe
      781 cgalcrsayf qthvkenclh yarkvgyrci hcgvvhltla llkshiqerh cqvfhkcafc
      841 pmafktarst adhsatqhpt qphrpsqliy kcscemvfnk krhiqqhfyq nastaqvgvf
      901 kcpecpllfl qkpelmqhvk sthgvprnvd elsslqsstd sssgrpgprv paeppapsvt
      961 argsalpssr wgrpeahrra earprlrntg wtcqecqewv pdresyvshm kkshgrtlkr
     1021 ypcrqceqsf htpnslrkhi rnnhdtvkkv ytcgycteds psfprpslle shislmhgir
     1081 npdlsqtska rpsgghspqv nhlkrpvsgv gaapdtsngt pvsstkrhks lfqcakcsfa
     1141 tdsglefqsh ipqhqkdsst aqcllcglcy tsagslsrhl fivhkvrdqe eeeaeaaepe
     1201 egsgeevsme trengleega eeplvgdset grslglaqde dgaqdassrp qtsqdrdslt
     1261 pspqv
//
LOCUS       XP_061014762            1265 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein 592 [Dama dama].
ACCESSION   XP_061014762
VERSION     XP_061014762.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158779.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1265
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1265
                     /product="zinc finger protein 592"
                     /calculated_mol_wt=136437
     Region          <252..>452
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          750..770
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          778..795
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          993..1013
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(998,1000,1002,1004..1005,1008..1009,1012,1028,1030,
                     1034..1035,1038..1039,1043,1058,1063,1065,1067..1068,
                     1071..1072)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          1023..1044
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1023,1026,1039,1044)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          1053..1073
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1159..1185
                     /region_name="zf-C2H2_11"
                     /note="zinc-finger C2H2-type; pfam16622"
                     /db_xref="CDD:465205"
     CDS             1..1265
                     /gene="ZNF592"
                     /coded_by="XM_061158779.1:207..4004"
                     /db_xref="GeneID:133067819"
ORIGIN      
        1 mgdmktpdfd dllaafdipd ptsldakeai qtpseenesp lkppglcvde nvslshsgsa
       61 sdvpavsviv kntsrqesfe aekdhiapsl lhngfrgsdl padphslghn cgkfdstfmn
      121 gdstrgfpgk leaskseplp tfnqfspiss pepedaikdn gfgmkpkhsd syfppppgcg
      181 svegpvleal tkfpvpelhm fdhfckkepk peplplgsph eherggqkal evhkeldasr
      241 ffgdaldfss hpgnsigepk glaselgsgs avpprqrlkp ahsklsscva alvalqakrv
      301 anvakedqps htkdpsgpak egskgspkmp kspksprspl eatrkstkps dsprsicsds
      361 sskgspsvaa ssppaipkvr iktiktssge ikrtvtrilp dpddpskspv gsplgsatte
      421 apseapedea ttlsgvehfa evgahpgspq sdrkgeecta kasepspscc ssgawgpkga
      481 asgtqagrkp qqspappast papanllpka vhlanlnlvp hsvaasvtak ssaqrrsqpq
      541 ptqmsvplvh qvkkaaplvv evfnkvlhss npvplyapnl sppadsrihv pasgycclec
      601 gdafaleksl sqhygrrsvh ievlctlcsq tllffnkcsl lrhardhksk glvmqcsqll
      661 vkpisadqmf vstsgnstap aaaaspspsq pgpasnnast plpalplypd pvrlirhsik
      721 clechkqmrd ymamaahfqr tteetegltc qvcqmllpnq csfcahqrih ahkspyccpe
      781 cgalcrsayf qthvkenclh yarkvgyrci hcgvvhltla llkshiqerh cqvfhkcafc
      841 pmafktarst adhsatqhpt qphrpsqliy kcscemvfnk krhiqqhfyq nastaqvgvf
      901 kcpecpllfl qkpelmqhvk sthgvprnvd elsslqsstd sssgrpgprv paeppapsvt
      961 argsalpssr wgrpeahrra earprlrntg wtcqecqewv pdresyvshm kkshgrtlkr
     1021 ypcrqceqsf htpnslrkhi rnnhdtvkkv ytcgycteds psfprpslle shislmhgir
     1081 npdlsqtska rpsgghspqv nhlkrpvsgv gaapdtsngt pvsstkrhks lfqcakcsfa
     1141 tdsglefqsh ipqhqkdsst aqcllcglcy tsagslsrhl fivhkvrdqe eeeaeaaepe
     1201 egsgeevsme trengleega eeplvgdset grslglaqde dgaqdassrp qtsqdrdslt
     1261 pspqv
//
LOCUS       XP_061014763            1681 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-protein kinase 3 isoform X1 [Dama dama].
ACCESSION   XP_061014763
VERSION     XP_061014763.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158780.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1681
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1681
                     /product="alpha-protein kinase 3 isoform X1"
                     /calculated_mol_wt=178842
     Region          77..169
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          94..98
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          107..111
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          135..139
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          149..154
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          162..165
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          301..>552
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          <464..929
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1351..1593
                     /region_name="Alpha_kinase"
                     /note="Alpha kinase family; cl28917"
                     /db_xref="CDD:355793"
     Site            order(1390..1391,1393..1394,1396..1397,1399,1419,1421,
                     1478,1496..1499,1548,1550,1558)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:341214"
     CDS             1..1681
                     /gene="ALPK3"
                     /coded_by="XM_061158780.1:29..5074"
                     /db_xref="GeneID:133067820"
ORIGIN      
        1 mgsrrapgrg wgsggrseag gdgeddgpvw ipspasrsyl lsvrpetsls snrlshpssg
       61 rstfcsiiaq lteetqplfe ttlksravse dsdvrftciv tgypepevtw ykddteldry
      121 cglpkyeimh qgnrhtlqly rcreedaaiy qasarnakgi vscsgvlevg tmteykihqr
      181 wfaklkrkaa akmreieqsw khgkeavgea dalrklspdr fqrkrrlsga evpvplapar
      241 evedgplvaw qegetepgqh pglglinsfa sgevttngea apengedgeh glltyiceam
      301 elgpqrapkk esgakkkkkd vepkqgvrkp evekaaqshr asenrfpssd kpdsrgtqgp
      361 lnmeqvqtrp rgraargpgs pgadgtrkpa sgagtpvqaq ktqvpapvpg pepevyfslk
      421 dmylestrad qpqveteaqt srgrtpgerp scresskagg ergstapsqp vptapqptgp
      481 fnrkrfappk lkgeptassk pdsspsqdpe pvaqssgktp sqasaqaptp parrrhstrd
      541 splqgragps tpgkvqesqa tmapasasss sdpvsadhst srsqgiiepm naetqedrkm
      601 spdqktggkk ntevdrkmqv dgrmqgdqte asqrtqadrm tqvdvvmqgr ersesdrnsq
      661 edvmaqgrvg tqaeertqed rwvqqdkgtq segstplttk grsekasmts lsphsrapkr
      721 ppsenprspq viegfgqsqe efsvpdklgc iltsdqtpgp asgnqeeavl gplvgglask
      781 aqlppkgrse qvggersggp ewsapgrdkp reglfqgpre eelgrappaa lggrppgglg
      841 pegrplpspp eaglarhsqe glpstpasqp rsaaafppse dktllssaps lhlgpgpssq
      901 shppetvaan segacakvpd adertsgprt cdpglidslk nylllllkls ssetsgggpe
      961 sqgeaatggp aplptlapti evaglsprts rrilervenn hlvqsaqtll lspctsrrlt
     1021 glldreveag rqalaaarrp gpsplsvpai vvgeeegpgl asggssegeg efplegpvll
     1081 easressmgg llreegggqa apgqgllsae srtqepspee eapgetlpaa tpeelalgar
     1141 rkrflpkvka agdgeaakpe erespsvspr gprkalapgs pgtpgrerrs ptqgrkagml
     1201 evpreeeela tgdpgpspka ssldaelame egnqdapaks rkakdllkap qvirkirveq
     1261 fpdasgslkl wcqffnilsd svltwakdqr pvgevgrsag degpaalaiv qaspvdcgvy
     1321 rctihnehgs astdfclspe vlsgfisree gqvgeeiemt pmvfakglad sgcwgdklfg
     1381 rlvseelrgg ghgcslrkas qakviyglep ifesgrtcii kvssllvfgp ssetsllgrn
     1441 ydvtiqgcki qnmsreycki faaearaapg fgevpeiipl yliyrpanni pyatleedlg
     1501 qplesycsrd wgcaaapaap ssseavwkcq tfqhwlylwt ngsflvtdla gvnwkmtdvq
     1561 iatklrgyqg lkescfpall dqfasshqcn tfcemlglkp lkgpeathpq akakgsksps
     1621 agrkgpqlsp qpqkkgppsp qgtrksasgs katpqasevv ttqllgqppt qeggsktqsm
     1681 r
//
LOCUS       XP_061014764            1668 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-protein kinase 3 isoform X2 [Dama dama].
ACCESSION   XP_061014764
VERSION     XP_061014764.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158781.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1668
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1668
                     /product="alpha-protein kinase 3 isoform X2"
                     /calculated_mol_wt=177532
     Region          64..156
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          81..85
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          94..98
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          122..126
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          136..141
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          149..152
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          288..>539
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          <451..916
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1338..1580
                     /region_name="Alpha_kinase"
                     /note="Alpha kinase family; cl28917"
                     /db_xref="CDD:355793"
     Site            order(1377..1378,1380..1381,1383..1384,1386,1406,1408,
                     1465,1483..1486,1535,1537,1545)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:341214"
     CDS             1..1668
                     /gene="ALPK3"
                     /coded_by="XM_061158781.1:29..5035"
                     /db_xref="GeneID:133067820"
ORIGIN      
        1 mgsrrapgrg wgsggrseag gdgeddgpvw ipspasrsyl lsvrpetrst fcsiiaqlte
       61 etqplfettl ksravsedsd vrftcivtgy pepevtwykd dteldrycgl pkyeimhqgn
      121 rhtlqlyrcr eedaaiyqas arnakgivsc sgvlevgtmt eykihqrwfa klkrkaaakm
      181 reieqswkhg keavgeadal rklspdrfqr krrlsgaevp vplapareve dgplvawqeg
      241 etepgqhpgl glinsfasge vttngeaape ngedgehgll tyiceamelg pqrapkkesg
      301 akkkkkdvep kqgvrkpeve kaaqshrase nrfpssdkpd srgtqgplnm eqvqtrprgr
      361 aargpgspga dgtrkpasga gtpvqaqktq vpapvpgpep evyfslkdmy lestradqpq
      421 veteaqtsrg rtpgerpscr esskaggerg stapsqpvpt apqptgpfnr krfappklkg
      481 eptasskpds spsqdpepva qssgktpsqa saqaptppar rrhstrdspl qgragpstpg
      541 kvqesqatma pasassssdp vsadhstsrs qgiiepmnae tqedrkmspd qktggkknte
      601 vdrkmqvdgr mqgdqteasq rtqadrmtqv dvvmqgrers esdrnsqedv maqgrvgtqa
      661 eertqedrwv qqdkgtqseg stplttkgrs ekasmtslsp hsrapkrpps enprspqvie
      721 gfgqsqeefs vpdklgcilt sdqtpgpasg nqeeavlgpl vgglaskaql ppkgrseqvg
      781 gersggpews apgrdkpreg lfqgpreeel grappaalgg rppgglgpeg rplpsppeag
      841 larhsqeglp stpasqprsa aafppsedkt llssapslhl gpgpssqshp petvaanseg
      901 acakvpdade rtsgprtcdp glidslknyl llllklssse tsgggpesqg eaatggpapl
      961 ptlaptieva glsprtsrri lervennhlv qsaqtlllsp ctsrrltgll dreveagrqa
     1021 laaarrpgps plsvpaivvg eeegpglasg gssegegefp legpvlleas ressmggllr
     1081 eegggqaapg qgllsaesrt qepspeeeap getlpaatpe elalgarrkr flpkvkaagd
     1141 geaakpeere spsvsprgpr kalapgspgt pgrerrsptq grkagmlevp reeeelatgd
     1201 pgpspkassl daelameegn qdapaksrka kdllkapqvi rkirveqfpd asgslklwcq
     1261 ffnilsdsvl twakdqrpvg evgrsagdeg paalaivqas pvdcgvyrct ihnehgsast
     1321 dfclspevls gfisreegqv geeiemtpmv fakgladsgc wgdklfgrlv seelrggghg
     1381 cslrkasqak viyglepife sgrtciikvs sllvfgpsse tsllgrnydv tiqgckiqnm
     1441 sreyckifaa earaapgfge vpeiiplyli yrpannipya tleedlgqpl esycsrdwgc
     1501 aaapaapsss eavwkcqtfq hwlylwtngs flvtdlagvn wkmtdvqiat klrgyqglke
     1561 scfpalldqf asshqcntfc emlglkplkg peathpqaka kgskspsagr kgpqlspqpq
     1621 kkgppspqgt rksasgskat pqasevvttq llgqpptqeg gsktqsmr
//
LOCUS       XP_061014765            1553 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-protein kinase 3 isoform X3 [Dama dama].
ACCESSION   XP_061014765
VERSION     XP_061014765.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158782.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1553
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1553
                     /product="alpha-protein kinase 3 isoform X3"
                     /calculated_mol_wt=164809
     Region          <4..41
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          7..11
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          21..26
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          34..37
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          173..>424
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          <336..801
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1223..1465
                     /region_name="Alpha_kinase"
                     /note="Alpha kinase family; cl28917"
                     /db_xref="CDD:355793"
     Site            order(1262..1263,1265..1266,1268..1269,1271,1291,1293,
                     1350,1368..1371,1420,1422,1430)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:341214"
     CDS             1..1553
                     /gene="ALPK3"
                     /coded_by="XM_061158782.1:1556..6217"
                     /db_xref="GeneID:133067820"
ORIGIN      
        1 mhqgnrhtlq lyrcreedaa iyqasarnak givscsgvle vgtmteykih qrwfaklkrk
       61 aaakmreieq swkhgkeavg eadalrklsp drfqrkrrls gaevpvplap arevedgplv
      121 awqegetepg qhpglglins fasgevttng eaapengedg ehglltyice amelgpqrap
      181 kkesgakkkk kdvepkqgvr kpevekaaqs hrasenrfps sdkpdsrgtq gplnmeqvqt
      241 rprgraargp gspgadgtrk pasgagtpvq aqktqvpapv pgpepevyfs lkdmylestr
      301 adqpqvetea qtsrgrtpge rpscresska ggergstaps qpvptapqpt gpfnrkrfap
      361 pklkgeptas skpdsspsqd pepvaqssgk tpsqasaqap tpparrrhst rdsplqgrag
      421 pstpgkvqes qatmapasas sssdpvsadh stsrsqgiie pmnaetqedr kmspdqktgg
      481 kkntevdrkm qvdgrmqgdq teasqrtqad rmtqvdvvmq grersesdrn sqedvmaqgr
      541 vgtqaeertq edrwvqqdkg tqsegstplt tkgrsekasm tslsphsrap krppsenprs
      601 pqviegfgqs qeefsvpdkl gciltsdqtp gpasgnqeea vlgplvggla skaqlppkgr
      661 seqvggersg gpewsapgrd kpreglfqgp reeelgrapp aalggrppgg lgpegrplps
      721 ppeaglarhs qeglpstpas qprsaaafpp sedktllssa pslhlgpgps sqshppetva
      781 ansegacakv pdadertsgp rtcdpglids lknylllllk lsssetsggg pesqgeaatg
      841 gpaplptlap tievaglspr tsrrilerve nnhlvqsaqt lllspctsrr ltglldreve
      901 agrqalaaar rpgpsplsvp aivvgeeegp glasggsseg egefplegpv lleasressm
      961 ggllreeggg qaapgqglls aesrtqepsp eeeapgetlp aatpeelalg arrkrflpkv
     1021 kaagdgeaak peerespsvs prgprkalap gspgtpgrer rsptqgrkag mlevpreeee
     1081 latgdpgpsp kassldaela meegnqdapa ksrkakdllk apqvirkirv eqfpdasgsl
     1141 klwcqffnil sdsvltwakd qrpvgevgrs agdegpaala ivqaspvdcg vyrctihneh
     1201 gsastdfcls pevlsgfisr eegqvgeeie mtpmvfakgl adsgcwgdkl fgrlvseelr
     1261 ggghgcslrk asqakviygl epifesgrtc iikvssllvf gpssetsllg rnydvtiqgc
     1321 kiqnmsreyc kifaaearaa pgfgevpeii plyliyrpan nipyatleed lgqplesycs
     1381 rdwgcaaapa apssseavwk cqtfqhwlyl wtngsflvtd lagvnwkmtd vqiatklrgy
     1441 qglkescfpa lldqfasshq cntfcemlgl kplkgpeath pqakakgsks psagrkgpql
     1501 spqpqkkgpp spqgtrksas gskatpqase vvttqllgqp ptqeggsktq smr
//
LOCUS       XP_061014766            1477 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-protein kinase 3 isoform X4 [Dama dama].
ACCESSION   XP_061014766
VERSION     XP_061014766.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158783.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1477
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1477
                     /product="alpha-protein kinase 3 isoform X4"
                     /calculated_mol_wt=156753
     Region          77..169
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          94..98
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          107..111
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          135..139
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          149..154
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          162..165
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          <370..556
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <464..929
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1351..>1476
                     /region_name="Alpha_kinase"
                     /note="Alpha kinase family; cl28917"
                     /db_xref="CDD:355793"
     CDS             1..1477
                     /gene="ALPK3"
                     /coded_by="XM_061158783.1:29..4462"
                     /db_xref="GeneID:133067820"
ORIGIN      
        1 mgsrrapgrg wgsggrseag gdgeddgpvw ipspasrsyl lsvrpetsls snrlshpssg
       61 rstfcsiiaq lteetqplfe ttlksravse dsdvrftciv tgypepevtw ykddteldry
      121 cglpkyeimh qgnrhtlqly rcreedaaiy qasarnakgi vscsgvlevg tmteykihqr
      181 wfaklkrkaa akmreieqsw khgkeavgea dalrklspdr fqrkrrlsga evpvplapar
      241 evedgplvaw qegetepgqh pglglinsfa sgevttngea apengedgeh glltyiceam
      301 elgpqrapkk esgakkkkkd vepkqgvrkp evekaaqshr asenrfpssd kpdsrgtqgp
      361 lnmeqvqtrp rgraargpgs pgadgtrkpa sgagtpvqaq ktqvpapvpg pepevyfslk
      421 dmylestrad qpqveteaqt srgrtpgerp scresskagg ergstapsqp vptapqptgp
      481 fnrkrfappk lkgeptassk pdsspsqdpe pvaqssgktp sqasaqaptp parrrhstrd
      541 splqgragps tpgkvqesqa tmapasasss sdpvsadhst srsqgiiepm naetqedrkm
      601 spdqktggkk ntevdrkmqv dgrmqgdqte asqrtqadrm tqvdvvmqgr ersesdrnsq
      661 edvmaqgrvg tqaeertqed rwvqqdkgtq segstplttk grsekasmts lsphsrapkr
      721 ppsenprspq viegfgqsqe efsvpdklgc iltsdqtpgp asgnqeeavl gplvgglask
      781 aqlppkgrse qvggersggp ewsapgrdkp reglfqgpre eelgrappaa lggrppgglg
      841 pegrplpspp eaglarhsqe glpstpasqp rsaaafppse dktllssaps lhlgpgpssq
      901 shppetvaan segacakvpd adertsgprt cdpglidslk nylllllkls ssetsgggpe
      961 sqgeaatggp aplptlapti evaglsprts rrilervenn hlvqsaqtll lspctsrrlt
     1021 glldreveag rqalaaarrp gpsplsvpai vvgeeegpgl asggssegeg efplegpvll
     1081 easressmgg llreegggqa apgqgllsae srtqepspee eapgetlpaa tpeelalgar
     1141 rkrflpkvka agdgeaakpe erespsvspr gprkalapgs pgtpgrerrs ptqgrkagml
     1201 evpreeeela tgdpgpspka ssldaelame egnqdapaks rkakdllkap qvirkirveq
     1261 fpdasgslkl wcqffnilsd svltwakdqr pvgevgrsag degpaalaiv qaspvdcgvy
     1321 rctihnehgs astdfclspe vlsgfisree gqvgeeiemt pmvfakglad sgcwgdklfg
     1381 rlvseelrgg ghgcslrkas qakviyglep ifesgrtcii kvssllvfgp ssetsllgrn
     1441 ydvtiqgcki qnmsreycki faaearaapg fgevpeg
//
LOCUS       XP_061014767             681 aa            linear   MAM 02-DEC-2023
DEFINITION  sodium/nucleoside cotransporter 1 isoform X1 [Dama dama].
ACCESSION   XP_061014767
VERSION     XP_061014767.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158784.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..681
                     /product="sodium/nucleoside cotransporter 1 isoform X1"
                     /calculated_mol_wt=74081
     Region          180..623
                     /region_name="nupC"
                     /note="nucleoside transporter; TIGR00804"
                     /db_xref="CDD:273278"
     CDS             1..681
                     /gene="SLC28A1"
                     /coded_by="XM_061158784.1:174..2219"
                     /db_xref="GeneID:133067822"
ORIGIN      
        1 meddtprgre sislasvang ldnkgaelle sleegrdpgs naspsevgds wskagpepss
       61 gwrrrlqpal rvrhfcreha qlfrwicigl lctaytafll aacilnfqra lalfvltcvv
      121 lvflahsllk rllgpkllrc vkplghpclk lwfkrglala aflglvlwla ldtsrrpeql
      181 vsfggicvfv gllfafskhh ravswravfw glglqfvlgl ivirtepgfi afqwlgdqiq
      241 vflsytesgs sfvfgealik nvfafqvlpi ivffscamsv lyyvglmqwv imkiswlmqi
      301 tmgttatetl svagnifvsq teapllirpy ladmtlseih vvmtggyati agsllgayis
      361 fgidaaslia asvmaapcal alsklvypev eeskfrskeg vkltygdaqn lleaassgaa
      421 lsvkvvtnia anlvaflavl dfinaalswl gnmvniqgls fqlicsyilr pvaflmgvaw
      481 edcsvvaell gmklflnefv ayqglseykq rrlagteewv gskkqwisvr aeilttyalc
      541 gfanfssigi mlgglkeegg sadaardaer rkrglwspgp eppcppaasm apqrksdfsq
      601 ivlralctga cvslvnacva gilymprgpa vdcvsllntt lnsssfevyq cchqafqsas
      661 pefslealdn ccrfynhtic a
//
LOCUS       XP_061014768             655 aa            linear   MAM 02-DEC-2023
DEFINITION  sodium/nucleoside cotransporter 1 isoform X2 [Dama dama].
ACCESSION   XP_061014768
VERSION     XP_061014768.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158785.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..655
                     /product="sodium/nucleoside cotransporter 1 isoform X2"
                     /calculated_mol_wt=71211
     Region          180..597
                     /region_name="nupC"
                     /note="nucleoside transporter; TIGR00804"
                     /db_xref="CDD:273278"
     CDS             1..655
                     /gene="SLC28A1"
                     /coded_by="XM_061158785.1:175..2142"
                     /db_xref="GeneID:133067822"
ORIGIN      
        1 meddtprgre sislasvang ldnkgaelle sleegrdpgs naspsevgds wskagpepss
       61 gwrrrlqpal rvrhfcreha qlfrwicigl lctaytafll aacilnfqra lalfvltcvv
      121 lvflahsllk rllgpkllrc vkplghpclk lwfkrglala aflglvlwla ldtsrrpeql
      181 vsfggicvfv gllfafskhh ravswravfw glglqfvlgl ivirtepgfi afqwlgdqiq
      241 vlpiivffsc amsvlyyvgl mqwvimkisw lmqitmgtta tetlsvagni fvsqteapll
      301 irpyladmtl seihvvmtgg yatiagsllg ayisfgidaa sliaasvmaa pcalalsklv
      361 ypeveeskfr skegvkltyg daqnlleaas sgaalsvkvv tniaanlvaf lavldfinaa
      421 lswlgnmvni qglsfqlics yilrpvaflm gvawedcsvv aellgmklfl nefvayqgls
      481 eykqrrlagt eewvgskkqw isvraeiltt yalcgfanfs sigimlgglk eeggsadaar
      541 daerrkrglw spgpeppcpp aasmapqrks dfsqivlral ctgacvslvn acvagilymp
      601 rgpavdcvsl lnttlnsssf evyqcchqaf qsaspefsle aldnccrfyn htica
//
LOCUS       XP_061014769             654 aa            linear   MAM 02-DEC-2023
DEFINITION  sodium/nucleoside cotransporter 1 isoform X3 [Dama dama].
ACCESSION   XP_061014769
VERSION     XP_061014769.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158786.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..654
                     /product="sodium/nucleoside cotransporter 1 isoform X3"
                     /calculated_mol_wt=70947
     Region          180..596
                     /region_name="nupC"
                     /note="nucleoside transporter; TIGR00804"
                     /db_xref="CDD:273278"
     CDS             1..654
                     /gene="SLC28A1"
                     /coded_by="XM_061158786.1:176..2140"
                     /db_xref="GeneID:133067822"
ORIGIN      
        1 meddtprgre sislasvang ldnkgaelle sleegrdpgs naspsevgds wskagpepss
       61 gwrrrlqpal rvrhfcreha qlfrwicigl lctaytafll aacilnfqra lalfvltcvv
      121 lvflahsllk rllgpkllrc vkplghpclk lwfkrglala aflglvlwla ldtsrrpeql
      181 vsfggicvfv gllfafskhh ravswravfw glglqfvlgl ivirtepgfi afqwlgdqiq
      241 vflsytesgs sfvfgealik nvfafqiswl mqitmgttat etlsvagnif vsqteaplli
      301 rpyladmtls eihvvmtggy atiagsllga yisfgidaas liaasvmaap calalsklvy
      361 peveeskfrs kegvkltygd aqnlleaass gaalsvkvvt niaanlvafl avldfinaal
      421 swlgnmvniq glsfqlicsy ilrpvaflmg vawedcsvva ellgmklfln efvayqglse
      481 ykqrrlagte ewvgskkqwi svraeiltty alcgfanfss igimlgglke eggsadaard
      541 aerrkrglws pgpeppcppa asmapqrksd fsqivlralc tgacvslvna cvagilympr
      601 gpavdcvsll nttlnsssfe vyqcchqafq saspefslea ldnccrfynh tica
//
LOCUS       XP_061014770             649 aa            linear   MAM 02-DEC-2023
DEFINITION  sodium/nucleoside cotransporter 1 isoform X4 [Dama dama].
ACCESSION   XP_061014770
VERSION     XP_061014770.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158787.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..649
                     /product="sodium/nucleoside cotransporter 1 isoform X4"
                     /calculated_mol_wt=70740
     Region          180..591
                     /region_name="nupC"
                     /note="nucleoside transporter; TIGR00804"
                     /db_xref="CDD:273278"
     CDS             1..649
                     /gene="SLC28A1"
                     /coded_by="XM_061158787.1:174..2123"
                     /db_xref="GeneID:133067822"
ORIGIN      
        1 meddtprgre sislasvang ldnkgaelle sleegrdpgs naspsevgds wskagpepss
       61 gwrrrlqpal rvrhfcreha qlfrwicigl lctaytafll aacilnfqra lalfvltcvv
      121 lvflahsllk rllgpkllrc vkplghpclk lwfkrglala aflglvlwla ldtsrrpeql
      181 vsfggicvfv gllfafskhh ravswravfw glglqfvlgl ivirtepgfi afqwlgdqiq
      241 vflsytesgs sfvfgealik nvfafqvlpi ivffscamsv lyyvglmqwv imkiswlmqi
      301 tmgttatetl svagnifvsq teapllirpy ladmtlseih vvmtggyati agsllgayis
      361 fgidaaslia asvmaapcal alsklvypev eeskfrskeg vkltygdaqn lleaassgaa
      421 lsvkvvtnia anlvaflavl dfinaalswl gnmvniqgls fqlicsyilr pvaflmgvaw
      481 edcsvvaell gmklflnefv ayqglseykq rrlagteewv gskkqwisvr aeilttyalc
      541 gfanfssigi mlggltsmap qrksdfsqiv lralctgacv slvnacvagi lymprgpavd
      601 cvsllnttln sssfevyqcc hqafqsaspe fslealdncc rfynhtica
//
LOCUS       XP_061014771             832 aa            linear   MAM 02-DEC-2023
DEFINITION  high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic
            phosphodiesterase 8A isoform X1 [Dama dama].
ACCESSION   XP_061014771
VERSION     XP_061014771.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158788.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..832
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..832
                     /product="high affinity cAMP-specific and IBMX-insensitive
                     3',5'-cyclic phosphodiesterase 8A isoform X1"
                     /calculated_mol_wt=93037
     Region          1..>24
                     /region_name="PDE8"
                     /note="PDE8 phosphodiesterase; pfam08629"
                     /db_xref="CDD:400795"
     Region          80..>244
                     /region_name="RpfG"
                     /note="Response regulator c-di-GMP phosphodiesterase, RpfG
                     family, contains REC and HD-GYP domains [Signal
                     transduction mechanisms]; COG3437"
                     /db_xref="CDD:442663"
     Region          226..>327
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          558..811
                     /region_name="PDEase_I"
                     /note="3'5'-cyclic nucleotide phosphodiesterase;
                     pfam00233"
                     /db_xref="CDD:459723"
     CDS             1..832
                     /gene="PDE8A"
                     /coded_by="XM_061158788.1:16..2514"
                     /db_xref="GeneID:133067823"
ORIGIN      
        1 mgcapsihis esrgvypggk eaedvpgpaa pplapggpsl ppgqktaast rapgsslaes
       61 epcggsgski avadvqfgpm rfhpdqlqvl lvftkednqc ngfcraceka gfmctvtkea
      121 qtalacfldk hhdiiiidhr nsrhldaeal crsirsskls entviigvvr rvdreescvm
      181 sliaagftrr yienpspmac ynellqlefg evrsqlklra cnsmfaalek sqeaieitse
      241 dhiiqyanpa fettmgyqsg eligkeiaev pinekkadll dtinsckewq giysvrkkng
      301 dnvqqnvkii pvigqggkir hyvsiirvcn gnnkaekiae svqtdsytdn qsgkhkdrrk
      361 ssldvktvas rtnevssqrr hssmarihsm tieapitkvi niinaaqess pmpvtealdr
      421 vleilrttel yspqfgakdd dphandlvgg lvsdglrrls gneyvlstkn lqqvpssiiv
      481 pvslhdvpsq itramekeey wdfnifelea athkrpliyl glkvfarfgv ceflkcpevt
      541 lrswlqmiea nyhasnpyhn sthsadvlha tayflckeri kqtldpldev aaliaatihd
      601 vdhpgrtnsf lcnagselai lyndmavleh hhaalafqlt tsddkcnifk nmerndyqtl
      661 rqgiidmvla temtkhfehv nkfvniinkp lvaleedget dkdqeaintm lrtpenrtli
      721 krmlikcadv snpcrpleqc iewaarisee yfsqtdeekq rdlpvvmpvf drntcsipks
      781 qisfidyfit dmfdawdafv dlpelmhhld nnfkywkgld dmklrslrpp pe
//
LOCUS       XP_061014772             786 aa            linear   MAM 02-DEC-2023
DEFINITION  high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic
            phosphodiesterase 8A isoform X2 [Dama dama].
ACCESSION   XP_061014772
VERSION     XP_061014772.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158789.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..786
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..786
                     /product="high affinity cAMP-specific and IBMX-insensitive
                     3',5'-cyclic phosphodiesterase 8A isoform X2"
                     /calculated_mol_wt=89300
     Region          34..>198
                     /region_name="RpfG"
                     /note="Response regulator c-di-GMP phosphodiesterase, RpfG
                     family, contains REC and HD-GYP domains [Signal
                     transduction mechanisms]; COG3437"
                     /db_xref="CDD:442663"
     Region          180..>281
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          512..765
                     /region_name="PDEase_I"
                     /note="3'5'-cyclic nucleotide phosphodiesterase;
                     pfam00233"
                     /db_xref="CDD:459723"
     CDS             1..786
                     /gene="PDE8A"
                     /coded_by="XM_061158789.1:414..2774"
                     /db_xref="GeneID:133067823"
ORIGIN      
        1 mgfsdhrpei rdhwlgsdhv rpwiavadvq fgpmrfhpdq lqvllvftke dnqcngfcra
       61 cekagfmctv tkeaqtalac fldkhhdiii idhrnsrhld aealcrsirs sklsentvii
      121 gvvrrvdree scvmsliaag ftrryienps pmacynellq lefgevrsql klracnsmfa
      181 aleksqeaie itsedhiiqy anpafettmg yqsgeligke iaevpinekk adlldtinsc
      241 kewqgiysvr kkngdnvqqn vkiipvigqg gkirhyvsii rvcngnnkae kiaesvqtds
      301 ytdnqsgkhk drrkssldvk tvasrtnevs sqrrhssmar ihsmtieapi tkviniinaa
      361 qesspmpvte aldrvleilr ttelyspqfg akdddphand lvgglvsdgl rrlsgneyvl
      421 stknlqqvps siivpvslhd vpsqitrame keeywdfnif eleaathkrp liylglkvfa
      481 rfgvceflkc pevtlrswlq mieanyhasn pyhnsthsad vlhatayflc kerikqtldp
      541 ldevaaliaa tihdvdhpgr tnsflcnags elailyndma vlehhhaala fqlttsddkc
      601 nifknmernd yqtlrqgiid mvlatemtkh fehvnkfvni inkplvalee dgetdkdqea
      661 intmlrtpen rtlikrmlik cadvsnpcrp leqciewaar iseeyfsqtd eekqrdlpvv
      721 mpvfdrntcs ipksqisfid yfitdmfdaw dafvdlpelm hhldnnfkyw kglddmklrs
      781 lrpppe
//
LOCUS       XP_061014773             753 aa            linear   MAM 02-DEC-2023
DEFINITION  high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic
            phosphodiesterase 8A isoform X3 [Dama dama].
ACCESSION   XP_061014773
VERSION     XP_061014773.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158790.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..753
                     /product="high affinity cAMP-specific and IBMX-insensitive
                     3',5'-cyclic phosphodiesterase 8A isoform X3"
                     /calculated_mol_wt=85489
     Region          1..>165
                     /region_name="RpfG"
                     /note="Response regulator c-di-GMP phosphodiesterase, RpfG
                     family, contains REC and HD-GYP domains [Signal
                     transduction mechanisms]; COG3437"
                     /db_xref="CDD:442663"
     Region          147..>248
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          479..732
                     /region_name="PDEase_I"
                     /note="3'5'-cyclic nucleotide phosphodiesterase;
                     pfam00233"
                     /db_xref="CDD:459723"
     CDS             1..753
                     /gene="PDE8A"
                     /coded_by="XM_061158790.1:161..2422"
                     /db_xref="GeneID:133067823"
ORIGIN      
        1 mrfhpdqlqv llvftkednq cngfcracek agfmctvtke aqtalacfld khhdiiiidh
       61 rnsrhldaea lcrsirsskl sentviigvv rrvdreescv msliaagftr ryienpspma
      121 cynellqlef gevrsqlklr acnsmfaale ksqeaieits edhiiqyanp afettmgyqs
      181 geligkeiae vpinekkadl ldtinsckew qgiysvrkkn gdnvqqnvki ipvigqggki
      241 rhyvsiirvc ngnnkaekia esvqtdsytd nqsgkhkdrr kssldvktva srtnevssqr
      301 rhssmarihs mtieapitkv iniinaaqes spmpvteald rvleilrtte lyspqfgakd
      361 ddphandlvg glvsdglrrl sgneyvlstk nlqqvpssii vpvslhdvps qitramekee
      421 ywdfnifele aathkrpliy lglkvfarfg vceflkcpev tlrswlqmie anyhasnpyh
      481 nsthsadvlh atayflcker ikqtldplde vaaliaatih dvdhpgrtns flcnagsela
      541 ilyndmavle hhhaalafql ttsddkcnif knmerndyqt lrqgiidmvl atemtkhfeh
      601 vnkfvniink plvaleedge tdkdqeaint mlrtpenrtl ikrmlikcad vsnpcrpleq
      661 ciewaarise eyfsqtdeek qrdlpvvmpv fdrntcsipk sqisfidyfi tdmfdawdaf
      721 vdlpelmhhl dnnfkywkgl ddmklrslrp ppe
//
LOCUS       XP_061014774             753 aa            linear   MAM 02-DEC-2023
DEFINITION  high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic
            phosphodiesterase 8A isoform X3 [Dama dama].
ACCESSION   XP_061014774
VERSION     XP_061014774.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158791.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..753
                     /product="high affinity cAMP-specific and IBMX-insensitive
                     3',5'-cyclic phosphodiesterase 8A isoform X3"
                     /calculated_mol_wt=85489
     Region          1..>165
                     /region_name="RpfG"
                     /note="Response regulator c-di-GMP phosphodiesterase, RpfG
                     family, contains REC and HD-GYP domains [Signal
                     transduction mechanisms]; COG3437"
                     /db_xref="CDD:442663"
     Region          147..>248
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          479..732
                     /region_name="PDEase_I"
                     /note="3'5'-cyclic nucleotide phosphodiesterase;
                     pfam00233"
                     /db_xref="CDD:459723"
     CDS             1..753
                     /gene="PDE8A"
                     /coded_by="XM_061158791.1:91..2352"
                     /db_xref="GeneID:133067823"
ORIGIN      
        1 mrfhpdqlqv llvftkednq cngfcracek agfmctvtke aqtalacfld khhdiiiidh
       61 rnsrhldaea lcrsirsskl sentviigvv rrvdreescv msliaagftr ryienpspma
      121 cynellqlef gevrsqlklr acnsmfaale ksqeaieits edhiiqyanp afettmgyqs
      181 geligkeiae vpinekkadl ldtinsckew qgiysvrkkn gdnvqqnvki ipvigqggki
      241 rhyvsiirvc ngnnkaekia esvqtdsytd nqsgkhkdrr kssldvktva srtnevssqr
      301 rhssmarihs mtieapitkv iniinaaqes spmpvteald rvleilrtte lyspqfgakd
      361 ddphandlvg glvsdglrrl sgneyvlstk nlqqvpssii vpvslhdvps qitramekee
      421 ywdfnifele aathkrpliy lglkvfarfg vceflkcpev tlrswlqmie anyhasnpyh
      481 nsthsadvlh atayflcker ikqtldplde vaaliaatih dvdhpgrtns flcnagsela
      541 ilyndmavle hhhaalafql ttsddkcnif knmerndyqt lrqgiidmvl atemtkhfeh
      601 vnkfvniink plvaleedge tdkdqeaint mlrtpenrtl ikrmlikcad vsnpcrpleq
      661 ciewaarise eyfsqtdeek qrdlpvvmpv fdrntcsipk sqisfidyfi tdmfdawdaf
      721 vdlpelmhhl dnnfkywkgl ddmklrslrp ppe
//
LOCUS       XP_061014775             231 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133067824 isoform X1 [Dama dama].
ACCESSION   XP_061014775
VERSION     XP_061014775.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158792.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..231
                     /product="uncharacterized protein LOC133067824 isoform X1"
                     /calculated_mol_wt=24563
     CDS             1..231
                     /gene="LOC133067824"
                     /coded_by="XM_061158792.1:445..1140"
                     /db_xref="GeneID:133067824"
ORIGIN      
        1 mtvtgeegrg arhapdrerw tgvrrrvqrk sdpgirtvtk egecsvfyke rgnvptgtkv
       61 ssqrrhssma rihsmtieap itkviniina aqesspmpvt ealdrvleil rttelyspqf
      121 gakdddphan dlvgglvsvs vlagcrlgpa alacflrllv dslphtalfv cgvsqsldhp
      181 lprlscppae psptcglsgg vwgtagpqlg teggacsgqp acllrwvsif t
//
LOCUS       XP_061014776             200 aa            linear   MAM 02-DEC-2023
DEFINITION  high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic
            phosphodiesterase 8A-like isoform X2 [Dama dama].
ACCESSION   XP_061014776
VERSION     XP_061014776.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158793.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..200
                     /product="high affinity cAMP-specific and IBMX-insensitive
                     3',5'-cyclic phosphodiesterase 8A-like isoform X2"
                     /calculated_mol_wt=22292
     CDS             1..200
                     /gene="LOC133067824"
                     /coded_by="XM_061158793.1:445..1047"
                     /db_xref="GeneID:133067824"
ORIGIN      
        1 mtvtgeegrg arhapdrerw tgvrrrvqrk sdpgirtvtk egecsvfyke rgnvptgtkv
       61 ssqrrhssma rihsmtieap itkviniina aqesspmpvt ealdrvleil rttelyspqf
      121 gakdddphan dlvgglvsdg lrrlsgneyv lstknlqqvp ssiivpvslh dvpsqvtram
      181 ekeeywdfni feleaathkr
//
LOCUS       XP_061014777             135 aa            linear   MAM 02-DEC-2023
DEFINITION  small ribosomal subunit protein eS17 [Dama dama].
ACCESSION   XP_061014777
VERSION     XP_061014777.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158794.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..135
                     /product="small ribosomal subunit protein eS17"
                     /calculated_mol_wt=15393
     Region          1..122
                     /region_name="Ribosomal_S17e"
                     /note="Ribosomal S17; pfam00833"
                     /db_xref="CDD:425895"
     CDS             1..135
                     /gene="RPS17"
                     /coded_by="XM_061158794.1:115..522"
                     /db_xref="GeneID:133067827"
ORIGIN      
        1 mgrvrtktvk kaarviieky ytrlgndfht nkrvceeiai ipskklrnki agyvthlmkr
       61 iqrgpvrgis iklqeeerer rdnyvpevsa ldqeiievdp dtkemlklld fgslsnlqvt
      121 qptvgmnfkt prgav
//
LOCUS       XP_061014778             562 aa            linear   MAM 02-DEC-2023
DEFINITION  cytoplasmic polyadenylation element-binding protein 1 isoform X1
            [Dama dama].
ACCESSION   XP_061014778
VERSION     XP_061014778.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158795.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..562
                     /product="cytoplasmic polyadenylation element-binding
                     protein 1 isoform X1"
                     /calculated_mol_wt=62072
     Region          1..308
                     /region_name="CEBP1_N"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     1 N-terminus; pfam16368"
                     /db_xref="CDD:465107"
     Region          310..412
                     /region_name="RRM1_CPEB1"
                     /note="RNA recognition motif 1 (RRM1) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12723"
                     /db_xref="CDD:410122"
     Region          423..506
                     /region_name="RRM2_CPEB1"
                     /note="RNA recognition motif 2 (RRM2) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12725"
                     /db_xref="CDD:410124"
     Region          500..555
                     /region_name="CEBP_ZZ"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     ZZ domain; pfam16366"
                     /db_xref="CDD:465105"
     CDS             1..562
                     /gene="CPEB1"
                     /coded_by="XM_061158795.1:152..1840"
                     /db_xref="GeneID:133067828"
ORIGIN      
        1 mafpleeeag rikdcwdnqe apalstcrna nifrrinail dnsldfsrvc ttpvnrgihd
       61 hlpadfqdse etvtsrmlfp tsaqdssrgl pdandlclgl qslsltgwdr pwstqdsdss
      121 aqssthsvls mlhnplgnvl gkpplsflpl dplgsdlvdk fpapsirgpr ldtrpildsr
      181 ssspsdsdts gfssgsdhls dlisslrisp plpflsltgg gprdplkmgv gsrmdqeqaa
      241 laavtpspts askrwpgasv wpswdlleap kdpfsierea rlhrqaaavn eatctwsgql
      301 pprnyknpiy sckvflggvp wditeaglvn tfrvfgslsv ewpgkdgkhp rcppkgyvyl
      361 vfeleksvra llqacshdpl spdglseyyf kmssrrmrck evqvipwvla dsnfvqspsq
      421 rldpsrtvfv galhgmlnae alaailndlf ggvvyagidt dkhkypigsg rvtfnnqrsy
      481 lkavsaafve ikttkftkkv qidpyledsv chlcssqpgp ffcrdqvcfk yfcrscwhwr
      541 hsmeglrhhs plmrnqknrd ss
//
LOCUS       XP_061014779             561 aa            linear   MAM 02-DEC-2023
DEFINITION  cytoplasmic polyadenylation element-binding protein 1 isoform X2
            [Dama dama].
ACCESSION   XP_061014779
VERSION     XP_061014779.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158796.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..561
                     /product="cytoplasmic polyadenylation element-binding
                     protein 1 isoform X2"
                     /calculated_mol_wt=62001
     Region          1..307
                     /region_name="CEBP1_N"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     1 N-terminus; pfam16368"
                     /db_xref="CDD:465107"
     Region          309..411
                     /region_name="RRM1_CPEB1"
                     /note="RNA recognition motif 1 (RRM1) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12723"
                     /db_xref="CDD:410122"
     Region          422..505
                     /region_name="RRM2_CPEB1"
                     /note="RNA recognition motif 2 (RRM2) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12725"
                     /db_xref="CDD:410124"
     Region          499..554
                     /region_name="CEBP_ZZ"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     ZZ domain; pfam16366"
                     /db_xref="CDD:465105"
     CDS             1..561
                     /gene="CPEB1"
                     /coded_by="XM_061158796.1:152..1837"
                     /db_xref="GeneID:133067828"
ORIGIN      
        1 mafpleeeag rikdcwdnqe apalstcrna nifrrinail dnsldfsrvc ttpvnrgihd
       61 hlpdfqdsee tvtsrmlfpt saqdssrglp dandlclglq slsltgwdrp wstqdsdssa
      121 qssthsvlsm lhnplgnvlg kpplsflpld plgsdlvdkf papsirgprl dtrpildsrs
      181 sspsdsdtsg fssgsdhlsd lisslrispp lpflsltggg prdplkmgvg srmdqeqaal
      241 aavtpsptsa skrwpgasvw pswdlleapk dpfsierear lhrqaaavne atctwsgqlp
      301 prnyknpiys ckvflggvpw diteaglvnt frvfgslsve wpgkdgkhpr cppkgyvylv
      361 feleksvral lqacshdpls pdglseyyfk mssrrmrcke vqvipwvlad snfvqspsqr
      421 ldpsrtvfvg alhgmlnaea laailndlfg gvvyagidtd khkypigsgr vtfnnqrsyl
      481 kavsaafvei kttkftkkvq idpyledsvc hlcssqpgpf fcrdqvcfky fcrscwhwrh
      541 smeglrhhsp lmrnqknrds s
//
LOCUS       XP_061014780             550 aa            linear   MAM 02-DEC-2023
DEFINITION  cytoplasmic polyadenylation element-binding protein 1 isoform X3
            [Dama dama].
ACCESSION   XP_061014780
VERSION     XP_061014780.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158797.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..550
                     /product="cytoplasmic polyadenylation element-binding
                     protein 1 isoform X3"
                     /calculated_mol_wt=60771
     Region          1..308
                     /region_name="CEBP1_N"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     1 N-terminus; pfam16368"
                     /db_xref="CDD:465107"
     Region          310..400
                     /region_name="RRM1_CPEB1"
                     /note="RNA recognition motif 1 (RRM1) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12723"
                     /db_xref="CDD:410122"
     Region          411..494
                     /region_name="RRM2_CPEB1"
                     /note="RNA recognition motif 2 (RRM2) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12725"
                     /db_xref="CDD:410124"
     Region          488..543
                     /region_name="CEBP_ZZ"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     ZZ domain; pfam16366"
                     /db_xref="CDD:465105"
     CDS             1..550
                     /gene="CPEB1"
                     /coded_by="XM_061158797.1:152..1804"
                     /db_xref="GeneID:133067828"
ORIGIN      
        1 mafpleeeag rikdcwdnqe apalstcrna nifrrinail dnsldfsrvc ttpvnrgihd
       61 hlpadfqdse etvtsrmlfp tsaqdssrgl pdandlclgl qslsltgwdr pwstqdsdss
      121 aqssthsvls mlhnplgnvl gkpplsflpl dplgsdlvdk fpapsirgpr ldtrpildsr
      181 ssspsdsdts gfssgsdhls dlisslrisp plpflsltgg gprdplkmgv gsrmdqeqaa
      241 laavtpspts askrwpgasv wpswdlleap kdpfsierea rlhrqaaavn eatctwsgql
      301 pprnyknpiy sckvflggvp wditeaglvn tfrvfgslsv ewpgyvylvf eleksvrall
      361 qacshdplsp dglseyyfkm ssrrmrckev qvipwvlads nfvqspsqrl dpsrtvfvga
      421 lhgmlnaeal aailndlfgg vvyagidtdk hkypigsgrv tfnnqrsylk avsaafveik
      481 ttkftkkvqi dpyledsvch lcssqpgpff crdqvcfkyf crscwhwrhs meglrhhspl
      541 mrnqknrdss
//
LOCUS       XP_061014781             527 aa            linear   MAM 02-DEC-2023
DEFINITION  cytoplasmic polyadenylation element-binding protein 1 isoform X4
            [Dama dama].
ACCESSION   XP_061014781
VERSION     XP_061014781.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158798.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..527
                     /product="cytoplasmic polyadenylation element-binding
                     protein 1 isoform X4"
                     /calculated_mol_wt=58349
     Region          1..273
                     /region_name="CEBP1_N"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     1 N-terminus; pfam16368"
                     /db_xref="CDD:465107"
     Region          275..377
                     /region_name="RRM1_CPEB1"
                     /note="RNA recognition motif 1 (RRM1) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12723"
                     /db_xref="CDD:410122"
     Region          388..471
                     /region_name="RRM2_CPEB1"
                     /note="RNA recognition motif 2 (RRM2) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12725"
                     /db_xref="CDD:410124"
     Region          465..520
                     /region_name="CEBP_ZZ"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     ZZ domain; pfam16366"
                     /db_xref="CDD:465105"
     CDS             1..527
                     /gene="CPEB1"
                     /coded_by="XM_061158798.1:152..1735"
                     /db_xref="GeneID:133067828"
ORIGIN      
        1 mafpleeeag rikdcwdnqe apalstcrna nifrrinail dnsldfsrvc ttpvnrgihd
       61 hlpadfqdse etvtsrmlfp tsaqdssrgl pdandlclgl qslsltgwdr pwstqdsdss
      121 aqssthsaps irgprldtrp ildsrsssps dsdtsgfssg sdhlsdliss lrispplpfl
      181 sltgggprdp lkmgvgsrmd qeqaalaavt psptsaskrw pgasvwpswd lleapkdpfs
      241 ierearlhrq aaavneatct wsgqlpprny knpiysckvf lggvpwdite aglvntfrvf
      301 gslsvewpgk dgkhprcppk gyvylvfele ksvrallqac shdplspdgl seyyfkmssr
      361 rmrckevqvi pwvladsnfv qspsqrldps rtvfvgalhg mlnaealaai lndlfggvvy
      421 agidtdkhky pigsgrvtfn nqrsylkavs aafveikttk ftkkvqidpy ledsvchlcs
      481 sqpgpffcrd qvcfkyfcrs cwhwrhsmeg lrhhsplmrn qknrdss
//
LOCUS       XP_061014782             525 aa            linear   MAM 02-DEC-2023
DEFINITION  cytoplasmic polyadenylation element-binding protein 1 isoform X5
            [Dama dama].
ACCESSION   XP_061014782
VERSION     XP_061014782.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158799.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..525
                     /product="cytoplasmic polyadenylation element-binding
                     protein 1 isoform X5"
                     /calculated_mol_wt=57730
     Region          <28..271
                     /region_name="CEBP1_N"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     1 N-terminus; pfam16368"
                     /db_xref="CDD:465107"
     Region          273..375
                     /region_name="RRM1_CPEB1"
                     /note="RNA recognition motif 1 (RRM1) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12723"
                     /db_xref="CDD:410122"
     Region          386..469
                     /region_name="RRM2_CPEB1"
                     /note="RNA recognition motif 2 (RRM2) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12725"
                     /db_xref="CDD:410124"
     Region          463..518
                     /region_name="CEBP_ZZ"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     ZZ domain; pfam16366"
                     /db_xref="CDD:465105"
     CDS             1..525
                     /gene="CPEB1"
                     /coded_by="XM_061158799.1:29..1606"
                     /db_xref="GeneID:133067828"
ORIGIN      
        1 meepgglqsm gcrvghdcaa kqqqysadfq dseetvtsrm lfptsaqdss rglpdandlc
       61 lglqslsltg wdrpwstqds dssaqssths vlsmlhnplg nvlgkpplsf lpldplgsdl
      121 vdkfpapsir gprldtrpil dsrssspsds dtsgfssgsd hlsdlisslr ispplpflsl
      181 tgggprdplk mgvgsrmdqe qaalaavtps ptsaskrwpg asvwpswdll eapkdpfsie
      241 rearlhrqaa avneatctws gqlpprnykn piysckvflg gvpwditeag lvntfrvfgs
      301 lsvewpgkdg khprcppkgy vylvfeleks vrallqacsh dplspdglse yyfkmssrrm
      361 rckevqvipw vladsnfvqs psqrldpsrt vfvgalhgml naealaailn dlfggvvyag
      421 idtdkhkypi gsgrvtfnnq rsylkavsaa fveikttkft kkvqidpyle dsvchlcssq
      481 pgpffcrdqv cfkyfcrscw hwrhsmeglr hhsplmrnqk nrdss
//
LOCUS       XP_061014783             524 aa            linear   MAM 02-DEC-2023
DEFINITION  cytoplasmic polyadenylation element-binding protein 1 isoform X6
            [Dama dama].
ACCESSION   XP_061014783
VERSION     XP_061014783.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158800.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..524
                     /product="cytoplasmic polyadenylation element-binding
                     protein 1 isoform X6"
                     /calculated_mol_wt=57658
     Region          21..270
                     /region_name="CEBP1_N"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     1 N-terminus; pfam16368"
                     /db_xref="CDD:465107"
     Region          272..374
                     /region_name="RRM1_CPEB1"
                     /note="RNA recognition motif 1 (RRM1) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12723"
                     /db_xref="CDD:410122"
     Region          385..468
                     /region_name="RRM2_CPEB1"
                     /note="RNA recognition motif 2 (RRM2) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12725"
                     /db_xref="CDD:410124"
     Region          462..517
                     /region_name="CEBP_ZZ"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     ZZ domain; pfam16366"
                     /db_xref="CDD:465105"
     CDS             1..524
                     /gene="CPEB1"
                     /coded_by="XM_061158800.1:11..1585"
                     /db_xref="GeneID:133067828"
ORIGIN      
        1 meepgglqsm gcrvghdcaa kqqqysdfqd seetvtsrml fptsaqdssr glpdandlcl
       61 glqslsltgw drpwstqdsd ssaqssthsv lsmlhnplgn vlgkpplsfl pldplgsdlv
      121 dkfpapsirg prldtrpild srssspsdsd tsgfssgsdh lsdlisslri spplpflslt
      181 gggprdplkm gvgsrmdqeq aalaavtpsp tsaskrwpga svwpswdlle apkdpfsier
      241 earlhrqaaa vneatctwsg qlpprnyknp iysckvflgg vpwditeagl vntfrvfgsl
      301 svewpgkdgk hprcppkgyv ylvfeleksv rallqacshd plspdglsey yfkmssrrmr
      361 ckevqvipwv ladsnfvqsp sqrldpsrtv fvgalhgmln aealaailnd lfggvvyagi
      421 dtdkhkypig sgrvtfnnqr sylkavsaaf veikttkftk kvqidpyled svchlcssqp
      481 gpffcrdqvc fkyfcrscwh wrhsmeglrh hsplmrnqkn rdss
//
LOCUS       XP_061014784             498 aa            linear   MAM 02-DEC-2023
DEFINITION  cytoplasmic polyadenylation element-binding protein 1 isoform X7
            [Dama dama].
ACCESSION   XP_061014784
VERSION     XP_061014784.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158801.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..498
                     /product="cytoplasmic polyadenylation element-binding
                     protein 1 isoform X7"
                     /calculated_mol_wt=55168
     Region          1..244
                     /region_name="CEBP1_N"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     1 N-terminus; pfam16368"
                     /db_xref="CDD:465107"
     Region          246..348
                     /region_name="RRM1_CPEB1"
                     /note="RNA recognition motif 1 (RRM1) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12723"
                     /db_xref="CDD:410122"
     Region          359..442
                     /region_name="RRM2_CPEB1"
                     /note="RNA recognition motif 2 (RRM2) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12725"
                     /db_xref="CDD:410124"
     Region          436..491
                     /region_name="CEBP_ZZ"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     ZZ domain; pfam16366"
                     /db_xref="CDD:465105"
     CDS             1..498
                     /gene="CPEB1"
                     /coded_by="XM_061158801.1:152..1648"
                     /db_xref="GeneID:133067828"
ORIGIN      
        1 mafpleeeag rikdcwdnqe apalstcrna nifrrinail dnsldfsrvc ttpvnrgihd
       61 hlpvlsmlhn plgnvlgkpp lsflpldplg sdlvdkfpap sirgprldtr pildsrsssp
      121 sdsdtsgfss gsdhlsdlis slrispplpf lsltgggprd plkmgvgsrm dqeqaalaav
      181 tpsptsaskr wpgasvwpsw dlleapkdpf sierearlhr qaaavneatc twsgqlpprn
      241 yknpiysckv flggvpwdit eaglvntfrv fgslsvewpg kdgkhprcpp kgyvylvfel
      301 eksvrallqa cshdplspdg lseyyfkmss rrmrckevqv ipwvladsnf vqspsqrldp
      361 srtvfvgalh gmlnaealaa ilndlfggvv yagidtdkhk ypigsgrvtf nnqrsylkav
      421 saafveiktt kftkkvqidp yledsvchlc ssqpgpffcr dqvcfkyfcr scwhwrhsme
      481 glrhhsplmr nqknrdss
//
LOCUS       XP_061014785             486 aa            linear   MAM 02-DEC-2023
DEFINITION  cytoplasmic polyadenylation element-binding protein 1 isoform X8
            [Dama dama].
ACCESSION   XP_061014785
VERSION     XP_061014785.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158802.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..486
                     /product="cytoplasmic polyadenylation element-binding
                     protein 1 isoform X8"
                     /calculated_mol_wt=53470
     Region          <1..232
                     /region_name="CEBP1_N"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     1 N-terminus; pfam16368"
                     /db_xref="CDD:465107"
     Region          234..336
                     /region_name="RRM1_CPEB1"
                     /note="RNA recognition motif 1 (RRM1) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12723"
                     /db_xref="CDD:410122"
     Region          347..430
                     /region_name="RRM2_CPEB1"
                     /note="RNA recognition motif 2 (RRM2) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12725"
                     /db_xref="CDD:410124"
     Region          424..479
                     /region_name="CEBP_ZZ"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     ZZ domain; pfam16366"
                     /db_xref="CDD:465105"
     CDS             1..486
                     /gene="CPEB1"
                     /coded_by="XM_061158802.1:273..1733"
                     /db_xref="GeneID:133067828"
ORIGIN      
        1 mlfptsaqds srglpdandl clglqslslt gwdrpwstqd sdssaqssth svlsmlhnpl
       61 gnvlgkppls flpldplgsd lvdkfpapsi rgprldtrpi ldsrssspsd sdtsgfssgs
      121 dhlsdlissl rispplpfls ltgggprdpl kmgvgsrmdq eqaalaavtp sptsaskrwp
      181 gasvwpswdl leapkdpfsi erearlhrqa aavneatctw sgqlpprnyk npiysckvfl
      241 ggvpwditea glvntfrvfg slsvewpgkd gkhprcppkg yvylvfelek svrallqacs
      301 hdplspdgls eyyfkmssrr mrckevqvip wvladsnfvq spsqrldpsr tvfvgalhgm
      361 lnaealaail ndlfggvvya gidtdkhkyp igsgrvtfnn qrsylkavsa afveikttkf
      421 tkkvqidpyl edsvchlcss qpgpffcrdq vcfkyfcrsc whwrhsmegl rhhsplmrnq
      481 knrdss
//
LOCUS       XP_061014786             486 aa            linear   MAM 02-DEC-2023
DEFINITION  cytoplasmic polyadenylation element-binding protein 1 isoform X8
            [Dama dama].
ACCESSION   XP_061014786
VERSION     XP_061014786.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158803.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..486
                     /product="cytoplasmic polyadenylation element-binding
                     protein 1 isoform X8"
                     /calculated_mol_wt=53470
     Region          <1..232
                     /region_name="CEBP1_N"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     1 N-terminus; pfam16368"
                     /db_xref="CDD:465107"
     Region          234..336
                     /region_name="RRM1_CPEB1"
                     /note="RNA recognition motif 1 (RRM1) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12723"
                     /db_xref="CDD:410122"
     Region          347..430
                     /region_name="RRM2_CPEB1"
                     /note="RNA recognition motif 2 (RRM2) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12725"
                     /db_xref="CDD:410124"
     Region          424..479
                     /region_name="CEBP_ZZ"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     ZZ domain; pfam16366"
                     /db_xref="CDD:465105"
     CDS             1..486
                     /gene="CPEB1"
                     /coded_by="XM_061158803.1:144..1604"
                     /db_xref="GeneID:133067828"
ORIGIN      
        1 mlfptsaqds srglpdandl clglqslslt gwdrpwstqd sdssaqssth svlsmlhnpl
       61 gnvlgkppls flpldplgsd lvdkfpapsi rgprldtrpi ldsrssspsd sdtsgfssgs
      121 dhlsdlissl rispplpfls ltgggprdpl kmgvgsrmdq eqaalaavtp sptsaskrwp
      181 gasvwpswdl leapkdpfsi erearlhrqa aavneatctw sgqlpprnyk npiysckvfl
      241 ggvpwditea glvntfrvfg slsvewpgkd gkhprcppkg yvylvfelek svrallqacs
      301 hdplspdgls eyyfkmssrr mrckevqvip wvladsnfvq spsqrldpsr tvfvgalhgm
      361 lnaealaail ndlfggvvya gidtdkhkyp igsgrvtfnn qrsylkavsa afveikttkf
      421 tkkvqidpyl edsvchlcss qpgpffcrdq vcfkyfcrsc whwrhsmegl rhhsplmrnq
      481 knrdss
//
LOCUS       XP_061014787             486 aa            linear   MAM 02-DEC-2023
DEFINITION  cytoplasmic polyadenylation element-binding protein 1 isoform X8
            [Dama dama].
ACCESSION   XP_061014787
VERSION     XP_061014787.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158804.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..486
                     /product="cytoplasmic polyadenylation element-binding
                     protein 1 isoform X8"
                     /calculated_mol_wt=53470
     Region          <1..232
                     /region_name="CEBP1_N"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     1 N-terminus; pfam16368"
                     /db_xref="CDD:465107"
     Region          234..336
                     /region_name="RRM1_CPEB1"
                     /note="RNA recognition motif 1 (RRM1) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12723"
                     /db_xref="CDD:410122"
     Region          347..430
                     /region_name="RRM2_CPEB1"
                     /note="RNA recognition motif 2 (RRM2) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12725"
                     /db_xref="CDD:410124"
     Region          424..479
                     /region_name="CEBP_ZZ"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     ZZ domain; pfam16366"
                     /db_xref="CDD:465105"
     CDS             1..486
                     /gene="CPEB1"
                     /coded_by="XM_061158804.1:202..1662"
                     /db_xref="GeneID:133067828"
ORIGIN      
        1 mlfptsaqds srglpdandl clglqslslt gwdrpwstqd sdssaqssth svlsmlhnpl
       61 gnvlgkppls flpldplgsd lvdkfpapsi rgprldtrpi ldsrssspsd sdtsgfssgs
      121 dhlsdlissl rispplpfls ltgggprdpl kmgvgsrmdq eqaalaavtp sptsaskrwp
      181 gasvwpswdl leapkdpfsi erearlhrqa aavneatctw sgqlpprnyk npiysckvfl
      241 ggvpwditea glvntfrvfg slsvewpgkd gkhprcppkg yvylvfelek svrallqacs
      301 hdplspdgls eyyfkmssrr mrckevqvip wvladsnfvq spsqrldpsr tvfvgalhgm
      361 lnaealaail ndlfggvvya gidtdkhkyp igsgrvtfnn qrsylkavsa afveikttkf
      421 tkkvqidpyl edsvchlcss qpgpffcrdq vcfkyfcrsc whwrhsmegl rhhsplmrnq
      481 knrdss
//
LOCUS       XP_061014788             486 aa            linear   MAM 02-DEC-2023
DEFINITION  cytoplasmic polyadenylation element-binding protein 1 isoform X8
            [Dama dama].
ACCESSION   XP_061014788
VERSION     XP_061014788.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158805.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..486
                     /product="cytoplasmic polyadenylation element-binding
                     protein 1 isoform X8"
                     /calculated_mol_wt=53470
     Region          <1..232
                     /region_name="CEBP1_N"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     1 N-terminus; pfam16368"
                     /db_xref="CDD:465107"
     Region          234..336
                     /region_name="RRM1_CPEB1"
                     /note="RNA recognition motif 1 (RRM1) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12723"
                     /db_xref="CDD:410122"
     Region          347..430
                     /region_name="RRM2_CPEB1"
                     /note="RNA recognition motif 2 (RRM2) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12725"
                     /db_xref="CDD:410124"
     Region          424..479
                     /region_name="CEBP_ZZ"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     ZZ domain; pfam16366"
                     /db_xref="CDD:465105"
     CDS             1..486
                     /gene="CPEB1"
                     /coded_by="XM_061158805.1:414..1874"
                     /db_xref="GeneID:133067828"
ORIGIN      
        1 mlfptsaqds srglpdandl clglqslslt gwdrpwstqd sdssaqssth svlsmlhnpl
       61 gnvlgkppls flpldplgsd lvdkfpapsi rgprldtrpi ldsrssspsd sdtsgfssgs
      121 dhlsdlissl rispplpfls ltgggprdpl kmgvgsrmdq eqaalaavtp sptsaskrwp
      181 gasvwpswdl leapkdpfsi erearlhrqa aavneatctw sgqlpprnyk npiysckvfl
      241 ggvpwditea glvntfrvfg slsvewpgkd gkhprcppkg yvylvfelek svrallqacs
      301 hdplspdgls eyyfkmssrr mrckevqvip wvladsnfvq spsqrldpsr tvfvgalhgm
      361 lnaealaail ndlfggvvya gidtdkhkyp igsgrvtfnn qrsylkavsa afveikttkf
      421 tkkvqidpyl edsvchlcss qpgpffcrdq vcfkyfcrsc whwrhsmegl rhhsplmrnq
      481 knrdss
//
LOCUS       XP_061014789             486 aa            linear   MAM 02-DEC-2023
DEFINITION  cytoplasmic polyadenylation element-binding protein 1 isoform X8
            [Dama dama].
ACCESSION   XP_061014789
VERSION     XP_061014789.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158806.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..486
                     /product="cytoplasmic polyadenylation element-binding
                     protein 1 isoform X8"
                     /calculated_mol_wt=53470
     Region          <1..232
                     /region_name="CEBP1_N"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     1 N-terminus; pfam16368"
                     /db_xref="CDD:465107"
     Region          234..336
                     /region_name="RRM1_CPEB1"
                     /note="RNA recognition motif 1 (RRM1) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12723"
                     /db_xref="CDD:410122"
     Region          347..430
                     /region_name="RRM2_CPEB1"
                     /note="RNA recognition motif 2 (RRM2) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12725"
                     /db_xref="CDD:410124"
     Region          424..479
                     /region_name="CEBP_ZZ"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     ZZ domain; pfam16366"
                     /db_xref="CDD:465105"
     CDS             1..486
                     /gene="CPEB1"
                     /coded_by="XM_061158806.1:166..1626"
                     /db_xref="GeneID:133067828"
ORIGIN      
        1 mlfptsaqds srglpdandl clglqslslt gwdrpwstqd sdssaqssth svlsmlhnpl
       61 gnvlgkppls flpldplgsd lvdkfpapsi rgprldtrpi ldsrssspsd sdtsgfssgs
      121 dhlsdlissl rispplpfls ltgggprdpl kmgvgsrmdq eqaalaavtp sptsaskrwp
      181 gasvwpswdl leapkdpfsi erearlhrqa aavneatctw sgqlpprnyk npiysckvfl
      241 ggvpwditea glvntfrvfg slsvewpgkd gkhprcppkg yvylvfelek svrallqacs
      301 hdplspdgls eyyfkmssrr mrckevqvip wvladsnfvq spsqrldpsr tvfvgalhgm
      361 lnaealaail ndlfggvvya gidtdkhkyp igsgrvtfnn qrsylkavsa afveikttkf
      421 tkkvqidpyl edsvchlcss qpgpffcrdq vcfkyfcrsc whwrhsmegl rhhsplmrnq
      481 knrdss
//
LOCUS       XP_061014790             486 aa            linear   MAM 02-DEC-2023
DEFINITION  cytoplasmic polyadenylation element-binding protein 1 isoform X8
            [Dama dama].
ACCESSION   XP_061014790
VERSION     XP_061014790.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158807.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..486
                     /product="cytoplasmic polyadenylation element-binding
                     protein 1 isoform X8"
                     /calculated_mol_wt=53470
     Region          <1..232
                     /region_name="CEBP1_N"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     1 N-terminus; pfam16368"
                     /db_xref="CDD:465107"
     Region          234..336
                     /region_name="RRM1_CPEB1"
                     /note="RNA recognition motif 1 (RRM1) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12723"
                     /db_xref="CDD:410122"
     Region          347..430
                     /region_name="RRM2_CPEB1"
                     /note="RNA recognition motif 2 (RRM2) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12725"
                     /db_xref="CDD:410124"
     Region          424..479
                     /region_name="CEBP_ZZ"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     ZZ domain; pfam16366"
                     /db_xref="CDD:465105"
     CDS             1..486
                     /gene="CPEB1"
                     /coded_by="XM_061158807.1:166..1626"
                     /db_xref="GeneID:133067828"
ORIGIN      
        1 mlfptsaqds srglpdandl clglqslslt gwdrpwstqd sdssaqssth svlsmlhnpl
       61 gnvlgkppls flpldplgsd lvdkfpapsi rgprldtrpi ldsrssspsd sdtsgfssgs
      121 dhlsdlissl rispplpfls ltgggprdpl kmgvgsrmdq eqaalaavtp sptsaskrwp
      181 gasvwpswdl leapkdpfsi erearlhrqa aavneatctw sgqlpprnyk npiysckvfl
      241 ggvpwditea glvntfrvfg slsvewpgkd gkhprcppkg yvylvfelek svrallqacs
      301 hdplspdgls eyyfkmssrr mrckevqvip wvladsnfvq spsqrldpsr tvfvgalhgm
      361 lnaealaail ndlfggvvya gidtdkhkyp igsgrvtfnn qrsylkavsa afveikttkf
      421 tkkvqidpyl edsvchlcss qpgpffcrdq vcfkyfcrsc whwrhsmegl rhhsplmrnq
      481 knrdss
//
LOCUS       XP_061014791             486 aa            linear   MAM 02-DEC-2023
DEFINITION  cytoplasmic polyadenylation element-binding protein 1 isoform X8
            [Dama dama].
ACCESSION   XP_061014791
VERSION     XP_061014791.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158808.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..486
                     /product="cytoplasmic polyadenylation element-binding
                     protein 1 isoform X8"
                     /calculated_mol_wt=53470
     Region          <1..232
                     /region_name="CEBP1_N"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     1 N-terminus; pfam16368"
                     /db_xref="CDD:465107"
     Region          234..336
                     /region_name="RRM1_CPEB1"
                     /note="RNA recognition motif 1 (RRM1) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12723"
                     /db_xref="CDD:410122"
     Region          347..430
                     /region_name="RRM2_CPEB1"
                     /note="RNA recognition motif 2 (RRM2) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12725"
                     /db_xref="CDD:410124"
     Region          424..479
                     /region_name="CEBP_ZZ"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     ZZ domain; pfam16366"
                     /db_xref="CDD:465105"
     CDS             1..486
                     /gene="CPEB1"
                     /coded_by="XM_061158808.1:57..1517"
                     /db_xref="GeneID:133067828"
ORIGIN      
        1 mlfptsaqds srglpdandl clglqslslt gwdrpwstqd sdssaqssth svlsmlhnpl
       61 gnvlgkppls flpldplgsd lvdkfpapsi rgprldtrpi ldsrssspsd sdtsgfssgs
      121 dhlsdlissl rispplpfls ltgggprdpl kmgvgsrmdq eqaalaavtp sptsaskrwp
      181 gasvwpswdl leapkdpfsi erearlhrqa aavneatctw sgqlpprnyk npiysckvfl
      241 ggvpwditea glvntfrvfg slsvewpgkd gkhprcppkg yvylvfelek svrallqacs
      301 hdplspdgls eyyfkmssrr mrckevqvip wvladsnfvq spsqrldpsr tvfvgalhgm
      361 lnaealaail ndlfggvvya gidtdkhkyp igsgrvtfnn qrsylkavsa afveikttkf
      421 tkkvqidpyl edsvchlcss qpgpffcrdq vcfkyfcrsc whwrhsmegl rhhsplmrnq
      481 knrdss
//
LOCUS       XP_061014792             486 aa            linear   MAM 02-DEC-2023
DEFINITION  cytoplasmic polyadenylation element-binding protein 1 isoform X8
            [Dama dama].
ACCESSION   XP_061014792
VERSION     XP_061014792.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158809.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..486
                     /product="cytoplasmic polyadenylation element-binding
                     protein 1 isoform X8"
                     /calculated_mol_wt=53470
     Region          <1..232
                     /region_name="CEBP1_N"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     1 N-terminus; pfam16368"
                     /db_xref="CDD:465107"
     Region          234..336
                     /region_name="RRM1_CPEB1"
                     /note="RNA recognition motif 1 (RRM1) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12723"
                     /db_xref="CDD:410122"
     Region          347..430
                     /region_name="RRM2_CPEB1"
                     /note="RNA recognition motif 2 (RRM2) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12725"
                     /db_xref="CDD:410124"
     Region          424..479
                     /region_name="CEBP_ZZ"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     ZZ domain; pfam16366"
                     /db_xref="CDD:465105"
     CDS             1..486
                     /gene="CPEB1"
                     /coded_by="XM_061158809.1:106..1566"
                     /db_xref="GeneID:133067828"
ORIGIN      
        1 mlfptsaqds srglpdandl clglqslslt gwdrpwstqd sdssaqssth svlsmlhnpl
       61 gnvlgkppls flpldplgsd lvdkfpapsi rgprldtrpi ldsrssspsd sdtsgfssgs
      121 dhlsdlissl rispplpfls ltgggprdpl kmgvgsrmdq eqaalaavtp sptsaskrwp
      181 gasvwpswdl leapkdpfsi erearlhrqa aavneatctw sgqlpprnyk npiysckvfl
      241 ggvpwditea glvntfrvfg slsvewpgkd gkhprcppkg yvylvfelek svrallqacs
      301 hdplspdgls eyyfkmssrr mrckevqvip wvladsnfvq spsqrldpsr tvfvgalhgm
      361 lnaealaail ndlfggvvya gidtdkhkyp igsgrvtfnn qrsylkavsa afveikttkf
      421 tkkvqidpyl edsvchlcss qpgpffcrdq vcfkyfcrsc whwrhsmegl rhhsplmrnq
      481 knrdss
//
LOCUS       XP_061014793             486 aa            linear   MAM 02-DEC-2023
DEFINITION  cytoplasmic polyadenylation element-binding protein 1 isoform X8
            [Dama dama].
ACCESSION   XP_061014793
VERSION     XP_061014793.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158810.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..486
                     /product="cytoplasmic polyadenylation element-binding
                     protein 1 isoform X8"
                     /calculated_mol_wt=53470
     Region          <1..232
                     /region_name="CEBP1_N"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     1 N-terminus; pfam16368"
                     /db_xref="CDD:465107"
     Region          234..336
                     /region_name="RRM1_CPEB1"
                     /note="RNA recognition motif 1 (RRM1) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12723"
                     /db_xref="CDD:410122"
     Region          347..430
                     /region_name="RRM2_CPEB1"
                     /note="RNA recognition motif 2 (RRM2) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12725"
                     /db_xref="CDD:410124"
     Region          424..479
                     /region_name="CEBP_ZZ"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     ZZ domain; pfam16366"
                     /db_xref="CDD:465105"
     CDS             1..486
                     /gene="CPEB1"
                     /coded_by="XM_061158810.1:109..1569"
                     /db_xref="GeneID:133067828"
ORIGIN      
        1 mlfptsaqds srglpdandl clglqslslt gwdrpwstqd sdssaqssth svlsmlhnpl
       61 gnvlgkppls flpldplgsd lvdkfpapsi rgprldtrpi ldsrssspsd sdtsgfssgs
      121 dhlsdlissl rispplpfls ltgggprdpl kmgvgsrmdq eqaalaavtp sptsaskrwp
      181 gasvwpswdl leapkdpfsi erearlhrqa aavneatctw sgqlpprnyk npiysckvfl
      241 ggvpwditea glvntfrvfg slsvewpgkd gkhprcppkg yvylvfelek svrallqacs
      301 hdplspdgls eyyfkmssrr mrckevqvip wvladsnfvq spsqrldpsr tvfvgalhgm
      361 lnaealaail ndlfggvvya gidtdkhkyp igsgrvtfnn qrsylkavsa afveikttkf
      421 tkkvqidpyl edsvchlcss qpgpffcrdq vcfkyfcrsc whwrhsmegl rhhsplmrnq
      481 knrdss
//
LOCUS       XP_061014794             486 aa            linear   MAM 02-DEC-2023
DEFINITION  cytoplasmic polyadenylation element-binding protein 1 isoform X8
            [Dama dama].
ACCESSION   XP_061014794
VERSION     XP_061014794.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158811.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..486
                     /product="cytoplasmic polyadenylation element-binding
                     protein 1 isoform X8"
                     /calculated_mol_wt=53470
     Region          <1..232
                     /region_name="CEBP1_N"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     1 N-terminus; pfam16368"
                     /db_xref="CDD:465107"
     Region          234..336
                     /region_name="RRM1_CPEB1"
                     /note="RNA recognition motif 1 (RRM1) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12723"
                     /db_xref="CDD:410122"
     Region          347..430
                     /region_name="RRM2_CPEB1"
                     /note="RNA recognition motif 2 (RRM2) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12725"
                     /db_xref="CDD:410124"
     Region          424..479
                     /region_name="CEBP_ZZ"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     ZZ domain; pfam16366"
                     /db_xref="CDD:465105"
     CDS             1..486
                     /gene="CPEB1"
                     /coded_by="XM_061158811.1:60..1520"
                     /db_xref="GeneID:133067828"
ORIGIN      
        1 mlfptsaqds srglpdandl clglqslslt gwdrpwstqd sdssaqssth svlsmlhnpl
       61 gnvlgkppls flpldplgsd lvdkfpapsi rgprldtrpi ldsrssspsd sdtsgfssgs
      121 dhlsdlissl rispplpfls ltgggprdpl kmgvgsrmdq eqaalaavtp sptsaskrwp
      181 gasvwpswdl leapkdpfsi erearlhrqa aavneatctw sgqlpprnyk npiysckvfl
      241 ggvpwditea glvntfrvfg slsvewpgkd gkhprcppkg yvylvfelek svrallqacs
      301 hdplspdgls eyyfkmssrr mrckevqvip wvladsnfvq spsqrldpsr tvfvgalhgm
      361 lnaealaail ndlfggvvya gidtdkhkyp igsgrvtfnn qrsylkavsa afveikttkf
      421 tkkvqidpyl edsvchlcss qpgpffcrdq vcfkyfcrsc whwrhsmegl rhhsplmrnq
      481 knrdss
//
LOCUS       XP_061014795             486 aa            linear   MAM 02-DEC-2023
DEFINITION  cytoplasmic polyadenylation element-binding protein 1 isoform X8
            [Dama dama].
ACCESSION   XP_061014795
VERSION     XP_061014795.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158812.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..486
                     /product="cytoplasmic polyadenylation element-binding
                     protein 1 isoform X8"
                     /calculated_mol_wt=53470
     Region          <1..232
                     /region_name="CEBP1_N"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     1 N-terminus; pfam16368"
                     /db_xref="CDD:465107"
     Region          234..336
                     /region_name="RRM1_CPEB1"
                     /note="RNA recognition motif 1 (RRM1) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12723"
                     /db_xref="CDD:410122"
     Region          347..430
                     /region_name="RRM2_CPEB1"
                     /note="RNA recognition motif 2 (RRM2) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12725"
                     /db_xref="CDD:410124"
     Region          424..479
                     /region_name="CEBP_ZZ"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     ZZ domain; pfam16366"
                     /db_xref="CDD:465105"
     CDS             1..486
                     /gene="CPEB1"
                     /coded_by="XM_061158812.1:276..1736"
                     /db_xref="GeneID:133067828"
ORIGIN      
        1 mlfptsaqds srglpdandl clglqslslt gwdrpwstqd sdssaqssth svlsmlhnpl
       61 gnvlgkppls flpldplgsd lvdkfpapsi rgprldtrpi ldsrssspsd sdtsgfssgs
      121 dhlsdlissl rispplpfls ltgggprdpl kmgvgsrmdq eqaalaavtp sptsaskrwp
      181 gasvwpswdl leapkdpfsi erearlhrqa aavneatctw sgqlpprnyk npiysckvfl
      241 ggvpwditea glvntfrvfg slsvewpgkd gkhprcppkg yvylvfelek svrallqacs
      301 hdplspdgls eyyfkmssrr mrckevqvip wvladsnfvq spsqrldpsr tvfvgalhgm
      361 lnaealaail ndlfggvvya gidtdkhkyp igsgrvtfnn qrsylkavsa afveikttkf
      421 tkkvqidpyl edsvchlcss qpgpffcrdq vcfkyfcrsc whwrhsmegl rhhsplmrnq
      481 knrdss
//
LOCUS       XP_061014796             805 aa            linear   MAM 02-DEC-2023
DEFINITION  WASP homolog-associated protein with actin, membranes and
            microtubules isoform X1 [Dama dama].
ACCESSION   XP_061014796
VERSION     XP_061014796.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158813.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..805
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..805
                     /product="WASP homolog-associated protein with actin,
                     membranes and microtubules isoform X1"
                     /calculated_mol_wt=90518
     Region          5..51
                     /region_name="WHAMM-JMY_N"
                     /note="N-terminal of Junction-mediating and WASP
                     homolog-associated; pfam15920"
                     /db_xref="CDD:464942"
     Region          76..439
                     /region_name="JMY"
                     /note="Junction-mediating and -regulatory protein;
                     pfam15871"
                     /db_xref="CDD:464915"
     CDS             1..805
                     /gene="WHAMM"
                     /coded_by="XM_061158813.1:127..2544"
                     /db_xref="GeneID:133067831"
ORIGIN      
        1 mgdeqpdsle gwvpiredlf aeperhqlrf lvawndvegk favtchdrta qrrrrrkgsq
       61 qgpelaseva apppswagll saaglrgahr qlaalwpple rcfprlppel daggagawgl
      121 glglwtlvwp apagpseaal qelcgqlery lgqaadgcgg aavrdalfpg qgcaadcest
      181 refreralra rrdeasarlr qllqghekan tmvalmnvyr eedevyqelv tattmffqyl
      241 lqpfrdmref aascklailk sldeddlgpk rivalqkeaq ewtrqaeeai vsiqditvny
      301 fektvealag mkkqmaqdek rfgqaawata tprleklklm laretlqfmr akelclnhrr
      361 aeirdkmedl peqekkiniv ddlelqyyev qlelyevkfe ilkyeeillv tqldsikrli
      421 kdkqdeviyy dpcespeelt vmdgvmglqe gkqlevgvls rqcqqleskr gsicarrarl
      481 rnrkdqcken hrlrlqqaee rikyfhqhhs vqrkrdkkke eeqkkrewin qerqktlqrl
      541 rafkercpgq pvlkssrsqp vtsdlrnglp kqtplptsqm tavlrpssrk trsaplsevs
      601 tvktperedc agdspvltfv sagdqthsts geelsllpsp pppppppppp pppplplpaq
      661 pfssqpahhr nlrfetsvkd dqplplvces ptesprgptd sfsgpgsmde vlaslrhgrt
      721 ppqkvqapal ppprasvneh ilaairqgvk lkkvhpapgp spsstptsdl eksikaalqr
      781 ikrvsadsee eeeegdeqgp cewdh
//
LOCUS       XP_061014797             730 aa            linear   MAM 02-DEC-2023
DEFINITION  WASP homolog-associated protein with actin, membranes and
            microtubules isoform X2 [Dama dama].
ACCESSION   XP_061014797
VERSION     XP_061014797.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158814.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..730
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..730
                     /product="WASP homolog-associated protein with actin,
                     membranes and microtubules isoform X2"
                     /calculated_mol_wt=82584
     Region          5..51
                     /region_name="WHAMM-JMY_N"
                     /note="N-terminal of Junction-mediating and WASP
                     homolog-associated; pfam15920"
                     /db_xref="CDD:464942"
     Region          76..439
                     /region_name="JMY"
                     /note="Junction-mediating and -regulatory protein;
                     pfam15871"
                     /db_xref="CDD:464915"
     CDS             1..730
                     /gene="WHAMM"
                     /coded_by="XM_061158814.1:127..2319"
                     /db_xref="GeneID:133067831"
ORIGIN      
        1 mgdeqpdsle gwvpiredlf aeperhqlrf lvawndvegk favtchdrta qrrrrrkgsq
       61 qgpelaseva apppswagll saaglrgahr qlaalwpple rcfprlppel daggagawgl
      121 glglwtlvwp apagpseaal qelcgqlery lgqaadgcgg aavrdalfpg qgcaadcest
      181 refreralra rrdeasarlr qllqghekan tmvalmnvyr eedevyqelv tattmffqyl
      241 lqpfrdmref aascklailk sldeddlgpk rivalqkeaq ewtrqaeeai vsiqditvny
      301 fektvealag mkkqmaqdek rfgqaawata tprleklklm laretlqfmr akelclnhrr
      361 aeirdkmedl peqekkiniv ddlelqyyev qlelyevkfe ilkyeeillv tqldsikrli
      421 kdkqdeviyy dpcespeelt vmdgvmglqe gkqlevgvls rqcqqleskr gsicarrarl
      481 rnrkdqcken hrlrlqqaee rikyfhqhhs vqrkrdkkke eeqkkrewin qerqktlqrl
      541 rafkercpgq pvlkssrsqp vtsdlrnglp kqtplptsqm tavlrpssrk trsaplsevs
      601 tvktperedc agdspvltfv sagdqthsts gsmdevlasl rhgrtppqkv qapalpppra
      661 svnehilaai rqgvklkkvh papgpspsst ptsdleksik aalqrikrvs adseeeeeeg
      721 deqgpcewdh
//
LOCUS       XP_061014798             748 aa            linear   MAM 02-DEC-2023
DEFINITION  fibronectin type III and SPRY domain-containing protein 2 [Dama
            dama].
ACCESSION   XP_061014798
VERSION     XP_061014798.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158815.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..748
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..748
                     /product="fibronectin type III and SPRY domain-containing
                     protein 2"
                     /calculated_mol_wt=84702
     Region          186..>332
                     /region_name="PRK12704"
                     /note="phosphodiesterase; Provisional"
                     /db_xref="CDD:237177"
     Region          371..456
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; smart00060"
                     /db_xref="CDD:214495"
     Site            order(371,439,454)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          <372..>561
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Site            order(455..456,458..459)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          564..739
                     /region_name="SPRY"
                     /note="SPRY domain; cl02614"
                     /db_xref="CDD:470632"
     CDS             1..748
                     /gene="FSD2"
                     /coded_by="XM_061158815.1:721..2967"
                     /db_xref="GeneID:133067832"
ORIGIN      
        1 meegageapg lgrsaaskdf rfyhmdlyds edrlqifpee strmrregvq aemthepmrg
       61 gvkgkaqrdl geevdelvhl ygleddhelg defieentpr ievseypsym mmgseqrdwr
      121 ltgeaaqged lgfmgwgsvg qcqdlreayr yshgraseey ecyvipeeed eeevadvfcv
      181 tcktpirase kdqdehkqhe vtplskales akdeihknmy klekqiieme nfashleevf
      241 itveenfgrq eqnfeshyne iletlsqkye ekiqalgekk keklealygq lvncgenldt
      301 ckelmetiee mcheekvdfi kdavamadrl gkflqtktdv eisaqpdfed qtldfsdvek
      361 lmgsintipa psapvinpqa pnsatgssvr vcwslysddt vesyqlsyrp vqdgspgkeq
      421 teftmtvket ycsvtnllpn tqyefwvtaq nraglsptse ravymtapcp piikskeirs
      481 ceeaaliswe sgnlnpvdsy tveltqaetp gasgvtesvv giptceclvq lqprqnytiy
      541 vralnvggps arsepatvht tgsyfplneh tchpwltvse dgltvvrser rgptrepips
      601 ntqftrcaav mgnlipvrgr hywevevddc sdytvgvafe dvprqedlga nrlswcmrha
      661 fassrhkyef lhnkttpdir itvppkkigi lldyenakls ffnvdisqhl ytfscqlhqf
      721 vhpcfslekp gclkihngis mpehvtfy
//
LOCUS       XP_061014799             748 aa            linear   MAM 02-DEC-2023
DEFINITION  fibronectin type III and SPRY domain-containing protein 2 [Dama
            dama].
ACCESSION   XP_061014799
VERSION     XP_061014799.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158816.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..748
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..748
                     /product="fibronectin type III and SPRY domain-containing
                     protein 2"
                     /calculated_mol_wt=84702
     Region          186..>332
                     /region_name="PRK12704"
                     /note="phosphodiesterase; Provisional"
                     /db_xref="CDD:237177"
     Region          371..456
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; smart00060"
                     /db_xref="CDD:214495"
     Site            order(371,439,454)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          <372..>561
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Site            order(455..456,458..459)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          564..739
                     /region_name="SPRY"
                     /note="SPRY domain; cl02614"
                     /db_xref="CDD:470632"
     CDS             1..748
                     /gene="FSD2"
                     /coded_by="XM_061158816.1:592..2838"
                     /db_xref="GeneID:133067832"
ORIGIN      
        1 meegageapg lgrsaaskdf rfyhmdlyds edrlqifpee strmrregvq aemthepmrg
       61 gvkgkaqrdl geevdelvhl ygleddhelg defieentpr ievseypsym mmgseqrdwr
      121 ltgeaaqged lgfmgwgsvg qcqdlreayr yshgraseey ecyvipeeed eeevadvfcv
      181 tcktpirase kdqdehkqhe vtplskales akdeihknmy klekqiieme nfashleevf
      241 itveenfgrq eqnfeshyne iletlsqkye ekiqalgekk keklealygq lvncgenldt
      301 ckelmetiee mcheekvdfi kdavamadrl gkflqtktdv eisaqpdfed qtldfsdvek
      361 lmgsintipa psapvinpqa pnsatgssvr vcwslysddt vesyqlsyrp vqdgspgkeq
      421 teftmtvket ycsvtnllpn tqyefwvtaq nraglsptse ravymtapcp piikskeirs
      481 ceeaaliswe sgnlnpvdsy tveltqaetp gasgvtesvv giptceclvq lqprqnytiy
      541 vralnvggps arsepatvht tgsyfplneh tchpwltvse dgltvvrser rgptrepips
      601 ntqftrcaav mgnlipvrgr hywevevddc sdytvgvafe dvprqedlga nrlswcmrha
      661 fassrhkyef lhnkttpdir itvppkkigi lldyenakls ffnvdisqhl ytfscqlhqf
      721 vhpcfslekp gclkihngis mpehvtfy
//
LOCUS       XP_061014800             748 aa            linear   MAM 02-DEC-2023
DEFINITION  fibronectin type III and SPRY domain-containing protein 2 [Dama
            dama].
ACCESSION   XP_061014800
VERSION     XP_061014800.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158817.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..748
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..748
                     /product="fibronectin type III and SPRY domain-containing
                     protein 2"
                     /calculated_mol_wt=84702
     Region          186..>332
                     /region_name="PRK12704"
                     /note="phosphodiesterase; Provisional"
                     /db_xref="CDD:237177"
     Region          371..456
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; smart00060"
                     /db_xref="CDD:214495"
     Site            order(371,439,454)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          <372..>561
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Site            order(455..456,458..459)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          564..739
                     /region_name="SPRY"
                     /note="SPRY domain; cl02614"
                     /db_xref="CDD:470632"
     CDS             1..748
                     /gene="FSD2"
                     /coded_by="XM_061158817.1:680..2926"
                     /db_xref="GeneID:133067832"
ORIGIN      
        1 meegageapg lgrsaaskdf rfyhmdlyds edrlqifpee strmrregvq aemthepmrg
       61 gvkgkaqrdl geevdelvhl ygleddhelg defieentpr ievseypsym mmgseqrdwr
      121 ltgeaaqged lgfmgwgsvg qcqdlreayr yshgraseey ecyvipeeed eeevadvfcv
      181 tcktpirase kdqdehkqhe vtplskales akdeihknmy klekqiieme nfashleevf
      241 itveenfgrq eqnfeshyne iletlsqkye ekiqalgekk keklealygq lvncgenldt
      301 ckelmetiee mcheekvdfi kdavamadrl gkflqtktdv eisaqpdfed qtldfsdvek
      361 lmgsintipa psapvinpqa pnsatgssvr vcwslysddt vesyqlsyrp vqdgspgkeq
      421 teftmtvket ycsvtnllpn tqyefwvtaq nraglsptse ravymtapcp piikskeirs
      481 ceeaaliswe sgnlnpvdsy tveltqaetp gasgvtesvv giptceclvq lqprqnytiy
      541 vralnvggps arsepatvht tgsyfplneh tchpwltvse dgltvvrser rgptrepips
      601 ntqftrcaav mgnlipvrgr hywevevddc sdytvgvafe dvprqedlga nrlswcmrha
      661 fassrhkyef lhnkttpdir itvppkkigi lldyenakls ffnvdisqhl ytfscqlhqf
      721 vhpcfslekp gclkihngis mpehvtfy
//
LOCUS       XP_061014801             348 aa            linear   MAM 02-DEC-2023
DEFINITION  homer protein homolog 2 isoform X1 [Dama dama].
ACCESSION   XP_061014801
VERSION     XP_061014801.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158818.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..348
                     /product="homer protein homolog 2 isoform X1"
                     /calculated_mol_wt=39858
     Region          8..116
                     /region_name="EVH1_Homer_Vesl"
                     /note="Homer/Vesl family proteins EVH1 domain; cd01206"
                     /db_xref="CDD:269917"
     Site            order(29,75,79,94)
                     /site_type="other"
                     /note="proline-rich peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269917"
     Region          <157..>321
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..348
                     /gene="HOMER2"
                     /coded_by="XM_061158818.1:10427..11473"
                     /db_xref="GeneID:133067835"
ORIGIN      
        1 mtllslreqp ifttrahvfq idpstkknwv paskqavtvs yfydvtrnsy riisvdgakv
       61 iinstitpnm tftktsqkfg qwadsrantv fglgfsseqq ltkfaekfqe vkeaarlard
      121 ksqekietss nhsqassvng tddekascag padthlksen dklkialtqs aanvkkweie
      181 lqtlresnar ltsalqesaa sveqwkrqfs lcrdendrlr nkideleeqc seinrekekn
      241 tqlkrrieel eselrekete ltdlrkqsei ipqlmsecey vsekleaaer dnqnledkvr
      301 slktdieesk yrqrhlkvel ksflevldgk iddlhdfrrg lsklgadn
//
LOCUS       XP_061014802             343 aa            linear   MAM 02-DEC-2023
DEFINITION  homer protein homolog 2 isoform X2 [Dama dama].
ACCESSION   XP_061014802
VERSION     XP_061014802.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158819.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..343
                     /product="homer protein homolog 2 isoform X2"
                     /calculated_mol_wt=39231
     Region          3..111
                     /region_name="EVH1_Homer_Vesl"
                     /note="Homer/Vesl family proteins EVH1 domain; cd01206"
                     /db_xref="CDD:269917"
     Site            order(24,70,74,89)
                     /site_type="other"
                     /note="proline-rich peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269917"
     Region          <152..>316
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..343
                     /gene="HOMER2"
                     /coded_by="XM_061158819.1:61..1092"
                     /db_xref="GeneID:133067835"
ORIGIN      
        1 mgeqpifttr ahvfqidpst kknwvpaskq avtvsyfydv trnsyriisv dgakviinst
       61 itpnmtftkt sqkfgqwads rantvfglgf sseqqltkfa ekfqevkeaa rlardksqek
      121 ietssnhsqa ssvngtddek ascagpadth lksendklki altqsaanvk kweielqtlr
      181 esnarltsal qesaasveqw krqfslcrde ndrlrnkide leeqcseinr ekekntqlkr
      241 rieeleselr eketeltdlr kqseiipqlm seceyvsekl eaaerdnqnl edkvrslktd
      301 ieeskyrqrh lkvelksfle vldgkiddlh dfrrglsklg adn
//
LOCUS       XP_061014803             279 aa            linear   MAM 02-DEC-2023
DEFINITION  homer protein homolog 2 isoform X3 [Dama dama].
ACCESSION   XP_061014803
VERSION     XP_061014803.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158820.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..279
                     /product="homer protein homolog 2 isoform X3"
                     /calculated_mol_wt=32046
     Region          <1..47
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          <88..>252
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..279
                     /gene="HOMER2"
                     /coded_by="XM_061158820.1:518..1357"
                     /db_xref="GeneID:133067835"
ORIGIN      
        1 mtftktsqkf gqwadsrant vfglgfsseq qltkfaekfq evkeaarlar dksqekiets
       61 snhsqassvn gtddekasca gpadthlkse ndklkialtq saanvkkwei elqtlresna
      121 rltsalqesa asveqwkrqf slcrdendrl rnkideleeq cseinrekek ntqlkrriee
      181 leselreket eltdlrkqse iipqlmsece yvsekleaae rdnqnledkv rslktdiees
      241 kyrqrhlkve lksflevldg kiddlhdfrr glsklgadn
//
LOCUS       XP_061014805             279 aa            linear   MAM 02-DEC-2023
DEFINITION  homer protein homolog 2 isoform X3 [Dama dama].
ACCESSION   XP_061014805
VERSION     XP_061014805.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158822.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..279
                     /product="homer protein homolog 2 isoform X3"
                     /calculated_mol_wt=32046
     Region          <1..47
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          <88..>252
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..279
                     /gene="HOMER2"
                     /coded_by="XM_061158822.1:275..1114"
                     /db_xref="GeneID:133067835"
ORIGIN      
        1 mtftktsqkf gqwadsrant vfglgfsseq qltkfaekfq evkeaarlar dksqekiets
       61 snhsqassvn gtddekasca gpadthlkse ndklkialtq saanvkkwei elqtlresna
      121 rltsalqesa asveqwkrqf slcrdendrl rnkideleeq cseinrekek ntqlkrriee
      181 leselreket eltdlrkqse iipqlmsece yvsekleaae rdnqnledkv rslktdiees
      241 kyrqrhlkve lksflevldg kiddlhdfrr glsklgadn
//
LOCUS       XP_061014806             212 aa            linear   MAM 02-DEC-2023
DEFINITION  UPF0235 protein C15orf40 homolog [Dama dama].
ACCESSION   XP_061014806
VERSION     XP_061014806.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158823.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..212
                     /product="UPF0235 protein C15orf40 homolog"
                     /calculated_mol_wt=22655
     Region          121..192
                     /region_name="DUF167"
                     /note="Uncharacterized ACR, YggU family COG1872;
                     pfam02594"
                     /db_xref="CDD:460608"
     CDS             1..212
                     /gene="C13H15orf40"
                     /coded_by="XM_061158823.1:38..676"
                     /db_xref="GeneID:133067836"
ORIGIN      
        1 mpyffssfqe ervlippagr rrppsrteah gaapsccvrr rrglfrrqaa lraaslagms
       61 rlgyglrlle aasgsravtr lplgadmpkk agatnkgksq skeperplpp lgpvtvdpkg
      121 gvsiairakp gskqnavtdv tteavsvaia apptegeana elcrylskvl elrksdvvld
      181 kggksrekvv kllastppee ileklkkqve kk
//
LOCUS       XP_061014807             582 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA-binding protein MEX3B [Dama dama].
ACCESSION   XP_061014807
VERSION     XP_061014807.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158824.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..582
                     /product="RNA-binding protein MEX3B"
                     /calculated_mol_wt=59355
     Region          70..142
                     /region_name="KH-I_MEX3_rpt1"
                     /note="first type I K homology (KH) RNA-binding domain
                     found in the family of MEX-3 RNA-binding proteins;
                     cd22423"
                     /db_xref="CDD:411851"
     Site            order(79..80,82..84,86..90,92..94,97,103..109,137..138,
                     141..142)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:411851"
     Region          162..233
                     /region_name="KH-I_MEX3_rpt2"
                     /note="second type I K homology (KH) RNA-binding domain
                     found in the family of MEX-3 RNA-binding proteins;
                     cd22424"
                     /db_xref="CDD:411852"
     Site            order(174,176..178,180..184,187..188,191,197..203,232)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:411852"
     Region          525..582
                     /region_name="RING-HC_MEX3B"
                     /note="RING finger, HC subclass, found in RNA-binding
                     protein MEX3B; cd16721"
                     /db_xref="CDD:438381"
     CDS             1..582
                     /gene="MEX3B"
                     /coded_by="XM_061158824.1:347..2095"
                     /db_xref="GeneID:133067838"
ORIGIN      
        1 mpsslfadle rngsgggggg ggggggggge tlddqralql aldqlsllgl dsdegaslyd
       61 seprkksvnm tecvpvpsse hvaeivgrqg ckikalrakt ntyiktpvrg eepvfvvtgr
      121 kedvamarre iisaaehfsm irasrnknta lngavpgppn lpgqttiqvr vpyrvvglvv
      181 gpkgatikri qqqthtyivt psrdkepvfe vtgmpenvdr areeieahia lrtggiielt
      241 dendfhangt dvgfdlhhgs ggsgpgslws kptpsitptp grkpfssyrn dsssslgsas
      301 tdsyfgagts gsaattprla dysppspals fahngnnnnn gngytyaaaa ageasvpspd
      361 gcpelppafd papapppgap llwaqfersp gggpaapass scsssasssa assssvvfpg
      421 ggasapssan lglpvqrrlh pgascprlsp plhmapgage hhlarrvrsd pgggglayaa
      481 yanglgaqlp aglqpsssda sgssssssss ssssssssss sglrrkgsrd csvcfesevi
      541 aalvpcghnl fcmecanric eksepecpvc htavtqairi fs
//
LOCUS       XP_061014808            1130 aa            linear   MAM 02-DEC-2023
DEFINITION  elongation factor-like GTPase 1 isoform X1 [Dama dama].
ACCESSION   XP_061014808
VERSION     XP_061014808.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158825.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1130
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1130
                     /product="elongation factor-like GTPase 1 isoform X1"
                     /calculated_mol_wt=126055
     Region          1..1113
                     /region_name="PRK13351"
                     /note="elongation factor G-like protein; cl46912"
                     /db_xref="CDD:481252"
     CDS             1..1130
                     /gene="EFL1"
                     /coded_by="XM_061158825.1:149..3541"
                     /db_xref="GeneID:133067839"
ORIGIN      
        1 mvlnsldkmi qlqkntanir nicvlahvdh gkttladcli ssngiissrl agklrymdsr
       61 edeqvrgitm kssaislhya egdeeylinl idspghvdfs sevstavric dgciivvdav
      121 egvcpqtqav lrqawlenir pvlvinkidr livelkftpq eaychlknil eqinaltgtl
      181 ftskvleera ereaesqvnp nseqgeqvyd wstglentdd shlyfspdqg nvvftsaidg
      241 wgfgiehfak iysqktgirk evllktlwgd yyinmkakki mkvdqakgkk plfvqlilen
      301 iwslydallk kdkektdkiv tslglkigar earhsdprvq inaicsqwlp isqavlamvc
      361 qklpspldit aerveklmca gsqtfdslpp etqalkaafm kcgsedtapv iifvskmfav
      421 dakalpqnkp rpltqeeiae rrerarrrha eklaaaqgqa pmeptqdaga lemssqgeep
      481 kagdeqeves etpkpvppeg seqesfiafa rvfsgvarrg krifvlgpky spleflqqvp
      541 lgfsapledl ppvphmacct lenlyllmgr eledleevpp gnvlgigglq dfvlksatlc
      601 tspscppfip lnfeatpivr vaiepkhpse mpqlvkgmkl lnqadpcvqi liqetgehvl
      661 vtagevhlqr clddlkerfa kiqisvsepi ipfretitkp pkvdmvneei gkqqkvavih
      721 qtkedqskip egiqvdsdgl itmttpnkla tlsvralplp eevtqilees sdlirsmeql
      781 tsslnegknn sqmihqktqe kiwefkgkle hhltgrkwrn tvdqiwsfgp rkcgpnilvn
      841 ksedfqnsvw tgfngkaske asryrdlgns ivsgfqlatl sgpmceeplm gvcfvlekwd
      901 lskfeeqtas nkqsqepgdl akegqgegdt rscgdeqqel qdhgseafak rasqrgespl
      961 tdcygpfsgq liatmkeacr yalqvkpqrl maamytcdim atsdvlgrvy avlskregrv
     1021 lqeemkegtd mfiikavlpv aesfgfadei rkrtsglasp qlvfshweii psdpfwvptt
     1081 eeeylhfgek adsenqarky mnavrkrkgl yveekiveha ekqrtlsknk
//
LOCUS       XP_061014809            1129 aa            linear   MAM 02-DEC-2023
DEFINITION  elongation factor-like GTPase 1 isoform X2 [Dama dama].
ACCESSION   XP_061014809
VERSION     XP_061014809.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158826.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1129
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1129
                     /product="elongation factor-like GTPase 1 isoform X2"
                     /calculated_mol_wt=125984
     Region          1..1112
                     /region_name="PRK13351"
                     /note="elongation factor G-like protein; cl46912"
                     /db_xref="CDD:481252"
     CDS             1..1129
                     /gene="EFL1"
                     /coded_by="XM_061158826.1:149..3538"
                     /db_xref="GeneID:133067839"
ORIGIN      
        1 mvlnsldkmi qlqkntanir nicvlahvdh gkttladcli ssngiissrl agklrymdsr
       61 edeqvrgitm kssaislhya egdeeylinl idspghvdfs sevstavric dgciivvdav
      121 egvcpqtqav lrqawlenir pvlvinkidr livelkftpq eaychlknil eqinaltgtl
      181 ftskvleera ereaesqvnp nseqgeqvyd wstglentdd shlyfspdqg nvvftsaidg
      241 wgfgiehfak iysqktgirk evllktlwgd yyinmkakki mkvdqakgkk plfvqlilen
      301 iwslydallk kdkektdkiv tslglkigar earhsdprvq inaicsqwlp isqavlamvc
      361 qklpspldit aerveklmca gsqtfdslpp etqalkaafm kcgsedtapv iifvskmfav
      421 dakalpqnkp rpltqeeiae rrerarrrha eklaaaqgqa pmeptqdaga lemssqgeep
      481 kgdeqevese tpkpvppegs eqesfiafar vfsgvarrgk rifvlgpkys pleflqqvpl
      541 gfsapledlp pvphmacctl enlyllmgre ledleevppg nvlgigglqd fvlksatlct
      601 spscppfipl nfeatpivrv aiepkhpsem pqlvkgmkll nqadpcvqil iqetgehvlv
      661 tagevhlqrc lddlkerfak iqisvsepii pfretitkpp kvdmvneeig kqqkvavihq
      721 tkedqskipe giqvdsdgli tmttpnklat lsvralplpe evtqileess dlirsmeqlt
      781 sslnegknns qmihqktqek iwefkgkleh hltgrkwrnt vdqiwsfgpr kcgpnilvnk
      841 sedfqnsvwt gfngkaskea sryrdlgnsi vsgfqlatls gpmceeplmg vcfvlekwdl
      901 skfeeqtasn kqsqepgdla kegqgegdtr scgdeqqelq dhgseafakr asqrgesplt
      961 dcygpfsgql iatmkeacry alqvkpqrlm aamytcdima tsdvlgrvya vlskregrvl
     1021 qeemkegtdm fiikavlpva esfgfadeir krtsglaspq lvfshweiip sdpfwvptte
     1081 eeylhfgeka dsenqarkym navrkrkgly veekivehae kqrtlsknk
//
LOCUS       XP_061014810            1639 aa            linear   MAM 02-DEC-2023
DEFINITION  ADAMTS-like protein 3 [Dama dama].
ACCESSION   XP_061014810
VERSION     XP_061014810.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158827.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1639
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1639
                     /product="ADAMTS-like protein 3"
                     /calculated_mol_wt=182030
     Region          78..124
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          129..227
                     /region_name="ADAMTS_CR_3"
                     /note="ADAMTS cysteine-rich domain; pfam19236"
                     /db_xref="CDD:437068"
     Region          343..401
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          422..479
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          482..534
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          569..625
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          649..704
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          708..760
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          764..820
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          824..881
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          <930..994
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          931..935
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          944..948
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          966..970
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          980..985
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          989..992
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1212..1277
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cd00096"
                     /db_xref="CDD:409353"
     Region          1212..1216
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1225..1229
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1247..1251
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1261..1266
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1317..1384
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          1318..1322
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1331..1335
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1351..1355
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1365..1370
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1379..1382
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1390..1445
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1449..1506
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1566..1620
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     CDS             1..1639
                     /gene="ADAMTSL3"
                     /coded_by="XM_061158827.1:38..4957"
                     /db_xref="GeneID:133067840"
ORIGIN      
        1 masrkspwwl lmwlifmhsa llqttaeksp gayflpefal spqgsfledt tgeqfltyry
       61 ddqtsrntrs deekdsnwda wgdwsdcsrt cgggasyslr rcltgrnceg qniryktcsn
      121 hdcppdaedf raqqcsaynd vqyqgryyew lpqyndpaap calrcqargq nlvvelapkv
      181 ldgtrctads ldmcisgicq avgcdrqlgs nakedncgvc agdgatcrlv rgqsksqvsp
      241 ekreenviav plgsrsvrit vkgpahlfie sktlqgskge hsfnspgvfv venttvefqk
      301 gserqtfkip gplmadfifk trytvtkdsv vqfffyqpis hqwrqtdffp ctvtcgggyq
      361 lnsaecvdir lkrvvpdhyc hyypenvkpk pklkecsmdp cpssdgfkei mpydhfqplp
      421 rwehnpwtac svscgggiqr rtfvcveesm hgailqveew kcmyapkpkv mqtcnlfdcp
      481 kwiamewsqc tvtcgrglry rvvlcinhrg qhvggcnpql klhikeecii pipcykpkek
      541 spveaklpwl kqaqeleetr iateeptfvp epwstcsatc gpgvqvrevk crvlltftqt
      601 etelpeeece gprlpterpc llqpcdespa trelaaslqe qdsettydwe yagftpctat
      661 clgghqeaia vclhlqtqqt vndtlcdmvh rppamsqacn tepcpprwhm gswgpcsatc
      721 gvgiqtrevy clhpgespsp peecrdekph alqacnqfdc ppswhieewq qcsrtcgggt
      781 qnrrvtcrql ltdgsflnls eelcqgpkas srkscartdc pphwtvgdws kcsvscgvgt
      841 qrrqqmcqkl takgrrvpls etlcrhlsgp plvrscqmpv crkmkpemka rlgeqgpqil
      901 gvqrvyiqtr eekrinltvg srayllpnts viikcpvrrf qksriqwekd grclqnskrl
      961 gftksgslki hslaaldige yrciagpaqe tvvlkligtd nrliappalg ghtreypgmd
     1021 nneannlgat whkmrlmwnn knelylhngq innqsllral lghcspsagn answefenkq
     1081 feaavkqgay smetaqfdel irnmsqlmet geisddlasq viyqlvaelt kgqpahvplr
     1141 gipgealpta qlrgetgsvp qssnsknsgk ltfkpkgpvl lrqsqptsis fnktvnsrig
     1201 ntvyitrrte ainilcelvt pseatytwtk dgallqpsek vildgmgkiq irkptkkdqg
     1261 tygcavanhl gsdvesssvl yaeapvvlsv grnitrpehg hlsvviggfv eaplqanvti
     1321 qcpvkgvpqp nvtwlkkggs lsdnisllfn gslllqnlsl enegtyvcta tnalgkamat
     1381 svlhlletfw elgnwthcsa tcghlgaqvq rpqclmangq evseafcdql rkpraafqpc
     1441 nirdcpprwl tgtwsecsvs cgegfrsrqv tckrtrangt vqalpprvci prdrplgrrp
     1501 csshpcvqgl veqgnqcpgr clgrivrmqq hhiicqhpns sesscddtkr piiqrncllg
     1561 acdacwragp wkpcttacgr gfqsrkvdcv hpgsckpvtk trcapgkkpa swqhclgpsc
     1621 dstypsqeta qtqlttvrl
//
LOCUS       XP_061014811             370 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane 6 superfamily member 1 [Dama dama].
ACCESSION   XP_061014811
VERSION     XP_061014811.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158828.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..370
                     /product="transmembrane 6 superfamily member 1"
                     /calculated_mol_wt=41523
     Region          6..360
                     /region_name="TM6SF1-like"
                     /note="transmembrane 6 superfamily member 1, member 2, and
                     similar proteins; cd21106"
                     /db_xref="CDD:411047"
     CDS             1..370
                     /gene="TM6SF1"
                     /coded_by="XM_061158828.1:65..1177"
                     /db_xref="GeneID:133067842"
ORIGIN      
        1 msasaatgvf vlslsaipvt yvfnhlaaqh dswtivgaaa vvlllvalla rvlvkrkppr
       61 dplfyvyavf gftsvvnlii gleqdgiidg fmthylrege pylntayghm icywdgsahy
      121 lmylvmvaai aweesyrtig lywvgsiims ivvfvpgniv gkygtricpa fflsipytcl
      181 pvwagfriyn qpsenynyps kviqevqakd llrrpfdlml vlclllatgf cvfrgliald
      241 cpaelcrlyt qfqepylkdp aaypkiqmlv ylfysvpyfv ialyglvvpg cfwmpditli
      301 hagglaqaqf shigaslhar tayvyrvpee akiiflalni aygvlpqlla yrciyrpeff
      361 iktkadekve
//
LOCUS       XP_061014812             203 aa            linear   MAM 02-DEC-2023
DEFINITION  hepatoma-derived growth factor-related protein 3 [Dama dama].
ACCESSION   XP_061014812
VERSION     XP_061014812.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158829.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..203
                     /product="hepatoma-derived growth factor-related protein
                     3"
                     /calculated_mol_wt=22462
     Region          4..96
                     /region_name="PWWP_HDGFL3"
                     /note="PWWP domain found in Hepatoma-derived growth
                     factor-related protein 3 (HDGFL3); cd20150"
                     /db_xref="CDD:438978"
     Site            order(18,20..23,76,78)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438978"
     Site            order(22,25,48)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438978"
     Site            23..26
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438978"
     Site            order(33..37,39..40,56)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:438978"
     CDS             1..203
                     /gene="HDGFL3"
                     /coded_by="XM_061158829.1:72..683"
                     /db_xref="GeneID:133067843"
ORIGIN      
        1 marprpreyk agdlvfakmk gyphwparid elpegavkpp ankypifffg thetaflgpk
       61 dlfpykeykd kfgksnkrkg fneglweien npgvkftgyq aiqqqssset egeggntada
      121 sseeegdrve edgkgkrkse kagskrkksy tskksskqsr kspgdeddkd ckeeenksss
      181 eggdagndtr nttsdlqkts egt
//
LOCUS       XP_061014813             482 aa            linear   MAM 02-DEC-2023
DEFINITION  BTB/POZ domain-containing protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061014813
VERSION     XP_061014813.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158830.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..482
                     /product="BTB/POZ domain-containing protein 1 isoform X1"
                     /calculated_mol_wt=52812
     Region          46..179
                     /region_name="BTB_POZ_BTBD1_2"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in BTB/POZ
                     domain-containing proteins, BTBD1 and BTBD2; cd18281"
                     /db_xref="CDD:349590"
     Region          175..281
                     /region_name="BACK"
                     /note="BACK (BTB and C-terminal Kelch) domain; cl28903"
                     /db_xref="CDD:475122"
     Region          333..481
                     /region_name="PHR"
                     /note="PHR domain; pfam08005"
                     /db_xref="CDD:462339"
     CDS             1..482
                     /gene="BTBD1"
                     /coded_by="XM_061158830.1:101..1549"
                     /db_xref="GeneID:133067845"
ORIGIN      
        1 maslgpavtg eqvpgaeael gaagppppst sslgpllplk replynwqat kaslkerfaf
       61 lfnsellsdv rfvlgkgrgg ggaaggpqri pahrfvlaag savfdamfng gmattsaeie
      121 lpdvepaafl allrflysde vqigpetvmt tlytakkyav paleahcvef ltkhlradna
      181 fmlltqarlf depqlaslcl dtidkntmda isaegftdid idtlcavler dtlsirecrl
      241 fgavvrwaea ecqrqqlpmt fgnkqkvlgk alslirfplm tieefaagpa qsgilsdrev
      301 vnlflhftvn pkprveyidr prcclrgkec cinrfqqves rwgysgtsdr irftvnrris
      361 ivgfglygsi hgptdyqvni qiieyekkqt lgqndtgfsc dgtantfrvm fkepieilpn
      421 lcymacatlk gpdshygtkg lkkvvhetpt asktvffffs spgnnngtsi edgqipeiif
      481 yt
//
LOCUS       XP_061014814             385 aa            linear   MAM 02-DEC-2023
DEFINITION  BTB/POZ domain-containing protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061014814
VERSION     XP_061014814.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158831.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..385
                     /product="BTB/POZ domain-containing protein 1 isoform X2"
                     /calculated_mol_wt=42128
     Region          46..179
                     /region_name="BTB_POZ_BTBD1_2"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in BTB/POZ
                     domain-containing proteins, BTBD1 and BTBD2; cd18281"
                     /db_xref="CDD:349590"
     Region          175..281
                     /region_name="BACK"
                     /note="BACK (BTB and C-terminal Kelch) domain; cl28903"
                     /db_xref="CDD:475122"
     Region          333..>352
                     /region_name="PHR"
                     /note="PHR domain; pfam08005"
                     /db_xref="CDD:462339"
     CDS             1..385
                     /gene="BTBD1"
                     /coded_by="XM_061158831.1:105..1262"
                     /db_xref="GeneID:133067845"
ORIGIN      
        1 maslgpavtg eqvpgaeael gaagppppst sslgpllplk replynwqat kaslkerfaf
       61 lfnsellsdv rfvlgkgrgg ggaaggpqri pahrfvlaag savfdamfng gmattsaeie
      121 lpdvepaafl allrflysde vqigpetvmt tlytakkyav paleahcvef ltkhlradna
      181 fmlltqarlf depqlaslcl dtidkntmda isaegftdid idtlcavler dtlsirecrl
      241 fgavvrwaea ecqrqqlpmt fgnkqkvlgk alslirfplm tieefaagpa qsgilsdrev
      301 vnlflhftvn pkprveyidr prcclrgkec cinrfqqves rwgysgtsdr irslnmkknk
      361 hwdktildsv vmellthsgs csknp
//
LOCUS       XP_061014815             362 aa            linear   MAM 02-DEC-2023
DEFINITION  mortality factor 4-like protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061014815
VERSION     XP_061014815.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158832.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..362
                     /product="mortality factor 4-like protein 1 isoform X1"
                     /calculated_mol_wt=41362
     Region          15..110
                     /region_name="CBD_MSL3_like"
                     /note="chromo barrel domain of human male-specific lethal
                     complex subunit 3, and similar proteins; cd18983"
                     /db_xref="CDD:350846"
     Site            order(21..22,26..29,44,46..49,92,94..97,99..101,104..105)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:350846"
     Site            order(26,46,49,92)
                     /site_type="other"
                     /note="putative methylated histone tail binding site
                     [chemical binding]"
                     /db_xref="CDD:350846"
     Site            order(43,45..50,91..95)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350846"
     Site            order(43,46,50,91,95)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:350846"
     Region          176..351
                     /region_name="MRG"
                     /note="pfam05712"
                     /db_xref="CDD:461721"
     CDS             1..362
                     /gene="MORF4L1"
                     /coded_by="XM_061158832.1:127..1215"
                     /db_xref="GeneID:133067846"
ORIGIN      
        1 mapkqdpkpk fqegervlcf hgpllyeakc vkvaikdkqv kyfihysgwn kksavrprrs
       61 ektlkthedi valfpvpega psvhhpflts swdewvpesr vlkyvdtnlq kqrelqkanq
      121 eqyaegkmrg aapgkktagl qqknievktk knkqktpgng dggstsetpq pprkkrarvd
      181 ptveneetfm srvevkvkip eelkpwlvdd wdlitrqkql fylpakknvd siledyanyk
      241 ksrgntdnke yavnevvagi keyfnvmlgt qllykferpq yaeiladhpd apmsqvygap
      301 hllrlfvrig amlaytplde kslalllnyl hdflkylakn satlfsasdy evappeyhrk
      361 av
//
LOCUS       XP_061014816             361 aa            linear   MAM 02-DEC-2023
DEFINITION  mortality factor 4-like protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061014816
VERSION     XP_061014816.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158833.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..361
                     /product="mortality factor 4-like protein 1 isoform X2"
                     /calculated_mol_wt=41260
     Region          15..109
                     /region_name="CBD_MSL3_like"
                     /note="chromo barrel domain of human male-specific lethal
                     complex subunit 3, and similar proteins; cd18983"
                     /db_xref="CDD:350846"
     Site            order(21..22,26..29,44,46..49,91,93..96,98..100,103..104)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:350846"
     Site            order(26,46,49,91)
                     /site_type="other"
                     /note="putative methylated histone tail binding site
                     [chemical binding]"
                     /db_xref="CDD:350846"
     Site            order(43,45..50,52,91..94)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350846"
     Site            order(43,46,50,52,94)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:350846"
     Region          175..350
                     /region_name="MRG"
                     /note="pfam05712"
                     /db_xref="CDD:461721"
     CDS             1..361
                     /gene="MORF4L1"
                     /coded_by="XM_061158833.1:127..1212"
                     /db_xref="GeneID:133067846"
ORIGIN      
        1 mapkqdpkpk fqegervlcf hgpllyeakc vkvaikdkqv kyfihysgwn knavrprrse
       61 ktlkthediv alfpvpegap svhhpfltss wdewvpesrv lkyvdtnlqk qrelqkanqe
      121 qyaegkmrga apgkktaglq qknievktkk nkqktpgngd ggstsetpqp prkkrarvdp
      181 tveneetfms rvevkvkipe elkpwlvddw dlitrqkqlf ylpakknvds iledyanykk
      241 srgntdnkey avnevvagik eyfnvmlgtq llykferpqy aeiladhpda pmsqvygaph
      301 llrlfvriga mlaytpldek slalllnylh dflkylakns atlfsasdye vappeyhrka
      361 v
//
LOCUS       XP_061014817             323 aa            linear   MAM 02-DEC-2023
DEFINITION  mortality factor 4-like protein 1 isoform X3 [Dama dama].
ACCESSION   XP_061014817
VERSION     XP_061014817.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158834.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..323
                     /product="mortality factor 4-like protein 1 isoform X3"
                     /calculated_mol_wt=37071
     Region          15..71
                     /region_name="CBD_MSL3_like"
                     /note="chromo barrel domain of human male-specific lethal
                     complex subunit 3, and similar proteins; cd18983"
                     /db_xref="CDD:350846"
     Site            order(21..22,26..29,44,46..49,53,55..58,60..62,65..66)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:350846"
     Site            order(26,46,49,53)
                     /site_type="other"
                     /note="putative methylated histone tail binding site
                     [chemical binding]"
                     /db_xref="CDD:350846"
     Site            order(43,45..50,52..56)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350846"
     Site            order(43,46,50,52,56)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:350846"
     Region          137..312
                     /region_name="MRG"
                     /note="pfam05712"
                     /db_xref="CDD:461721"
     CDS             1..323
                     /gene="MORF4L1"
                     /coded_by="XM_061158834.1:123..1094"
                     /db_xref="GeneID:133067846"
ORIGIN      
        1 mapkqdpkpk fqegervlcf hgpllyeakc vkvaikdkqv kyfihysgwn knwdewvpes
       61 rvlkyvdtnl qkqrelqkan qeqyaegkmr gaapgkktag lqqknievkt kknkqktpgn
      121 gdggstsetp qpprkkrarv dptveneetf msrvevkvki peelkpwlvd dwdlitrqkq
      181 lfylpakknv dsiledyany kksrgntdnk eyavnevvag ikeyfnvmlg tqllykferp
      241 qyaeiladhp dapmsqvyga phllrlfvri gamlaytpld ekslalllny lhdflkylak
      301 nsatlfsasd yevappeyhr kav
//
LOCUS       XP_061014818             335 aa            linear   MAM 02-DEC-2023
DEFINITION  pro-cathepsin H [Dama dama].
ACCESSION   XP_061014818
VERSION     XP_061014818.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158835.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..335
                     /product="pro-cathepsin H"
                     /calculated_mol_wt=37266
     Region          35..90
                     /region_name="Inhibitor_I29"
                     /note="Cathepsin propeptide inhibitor domain (I29);
                     pfam08246"
                     /db_xref="CDD:462410"
     Region          117..331
                     /region_name="Peptidase_C1A"
                     /note="Peptidase C1A subfamily (MEROPS database
                     nomenclature); composed of cysteine peptidases (CPs)
                     similar to papain, including the mammalian CPs (cathepsins
                     B, C, F, H, L, K, O, S, V, X and W). Papain is an
                     endopeptidase with specific substrate preferences;
                     cd02248"
                     /db_xref="CDD:239068"
     Site            order(135,141,281,301)
                     /site_type="active"
                     /db_xref="CDD:239068"
     Site            order(185..186,252,279,282,327)
                     /site_type="active"
                     /note="S2 subsite [active]"
                     /db_xref="CDD:239068"
     CDS             1..335
                     /gene="CTSH"
                     /coded_by="XM_061158835.1:67..1074"
                     /db_xref="GeneID:133067847"
ORIGIN      
        1 mwavlpllca gawllgapac gaaelavssl ekfhfqlwmv qhqkkynsee yrhrlqvfas
       61 nlreinahna rnhtfkmgln qfsdmsfael krkylwsepq ncsatksnyl rgtgpyptsm
      121 dwrkkgnfvt pvknqggcgs cwtfsttgal esavaiatgk lpflaeqqlv dcaqnfnnhg
      181 ckgglpsqaf eyirynkgim gedtypyrgq dgdckyqpsk aiafvkdvan itlndeeamv
      241 eavalynpvs fafevtadfm myrkgiysst schktpdkvn havlavgyge ekgipywivk
      301 nswgpqwgmk gyfliergkn mcglaacasf piplv
//
LOCUS       XP_061014819             218 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane emp24 domain-containing protein 3 [Dama dama].
ACCESSION   XP_061014819
VERSION     XP_061014819.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158836.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..218
                     /product="transmembrane emp24 domain-containing protein 3"
                     /calculated_mol_wt=24651
     Region          29..206
                     /region_name="EMP24_GP25L"
                     /note="emp24/gp25L/p24 family/GOLD; pfam01105"
                     /db_xref="CDD:426051"
     CDS             1..218
                     /gene="TMED3"
                     /coded_by="XM_061158836.1:134..790"
                     /db_xref="GeneID:133067848"
ORIGIN      
        1 mggvvprsas alplllllll qaerprgael tfelpdnarq cfheeveqgv kfsldyqvit
       61 gghydvdcfm kdplgniiys etkkqydsft hkaevkgvyq fcfsnefstf shktvyfdfq
      121 vgdeppilpd mgnrvtaltq mesacvtihe alktvidsqk hyrlreaqdr araedlnsrv
      181 sywsigetia lfvvsfsqvl llksfftekr pigrtvhs
//
LOCUS       XP_061014820             206 aa            linear   MAM 02-DEC-2023
DEFINITION  bcl-2-related protein A1 [Dama dama].
ACCESSION   XP_061014820
VERSION     XP_061014820.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158837.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..206
                     /product="bcl-2-related protein A1"
                     /calculated_mol_wt=23483
     Region          38..177
                     /region_name="Bcl-2_like"
                     /note="Apoptosis regulator proteins of the Bcl-2 family,
                     named after B-cell lymphoma 2. This alignment model spans
                     what have been described as Bcl-2 homology regions BH1,
                     BH2, BH3, and BH4. Many members of this family have an
                     additional C-terminal transmembrane...; cd06845"
                     /db_xref="CDD:132900"
     Site            38..51
                     /site_type="active"
                     /note="BH4 [active]"
                     /db_xref="CDD:132900"
     Site            68..76
                     /site_type="active"
                     /note="BH3 [active]"
                     /db_xref="CDD:132900"
     Site            order(71..72,74..75,79,82..83,100..101,104..105,108..109,
                     116,118..119,121..122,126,130)
                     /site_type="active"
                     /note="BH3-homology region binding site [active]"
                     /db_xref="CDD:132900"
     Site            order(108..110,115..127)
                     /site_type="active"
                     /note="BH1 [active]"
                     /db_xref="CDD:132900"
     Site            order(163..172,174..177)
                     /site_type="active"
                     /note="BH2 [active]"
                     /db_xref="CDD:132900"
     CDS             1..206
                     /gene="BCL2A1"
                     /coded_by="XM_061158837.1:1016..1636"
                     /db_xref="GeneID:133067849"
ORIGIN      
        1 mfrqapqaca sdwlghsqvs rlktllpgke kmtdtelnyv hrlaedylky vlqiqqpgsg
       61 asktsrvlqv vassvqneve rtlkqcldkf dvvsidtarr ifnqvmekef edgivnwgri
      121 vtifafagil ikkllgkcia pdmdmckdis yfvaefiten tgewirqngg wengfvkkfe
      181 tksgwltfme vtgkicetlc rlkqyy
//
LOCUS       XP_061014821             201 aa            linear   MAM 02-DEC-2023
DEFINITION  5-formyltetrahydrofolate cyclo-ligase [Dama dama].
ACCESSION   XP_061014821
VERSION     XP_061014821.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158838.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..201
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /calculated_mol_wt=22730
     Region          11..199
                     /region_name="5-FTHF_cyc-lig"
                     /note="5-formyltetrahydrofolate cyclo-ligase family;
                     pfam01812"
                     /db_xref="CDD:396398"
     CDS             1..201
                     /gene="MTHFS"
                     /coded_by="XM_061158838.1:12..617"
                     /db_xref="GeneID:133067851"
ORIGIN      
        1 maaavavsga krslraelkq rlralsaeer lrqshllaqk vfthseyqks krvsiflsmp
       61 deieteeiik difrqgktcf ipryqlqsnh mdmvklaspe eiaslprtsw niqqpgedav
      121 leealstggl dlifmpglgf dkqsnrlgrg kgyydaylkr clqsqdmkpy tlalafkeqi
      181 clqvpvdend vkvdevlyed c
//
LOCUS       XP_061014822             228 aa            linear   MAM 02-DEC-2023
DEFINITION  AN1-type zinc finger protein 6 isoform X1 [Dama dama].
ACCESSION   XP_061014822
VERSION     XP_061014822.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158839.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..228
                     /product="AN1-type zinc finger protein 6 isoform X1"
                     /calculated_mol_wt=24546
     Region          12..35
                     /region_name="zf-A20"
                     /note="A20-like zinc finger; pfam01754"
                     /db_xref="CDD:460313"
     Region          169..206
                     /region_name="ZnF_AN1"
                     /note="AN1-like Zinc finger; smart00154"
                     /db_xref="CDD:197545"
     CDS             1..228
                     /gene="ZFAND6"
                     /coded_by="XM_061158839.1:392..1078"
                     /db_xref="GeneID:133067853"
ORIGIN      
        1 maqetnhsqv pmlcstgcgf ygnprtngmc svcykehlqr qnssngrisp pdkvparpgh
       61 rvtnvrcgpv aapsvtslse slpvqctdgs vpeaqsalds tassmqpspv snqsllsesv
      121 assqvdstsv dkaipetedl qasisetaqq aseeqsksle kpkqkknrcf mcrkkvgltg
      181 fecrcgnvyc gvhrysdvhn csynykadaa ekirkenpvv vgekiqki
//
LOCUS       XP_061014823             228 aa            linear   MAM 02-DEC-2023
DEFINITION  AN1-type zinc finger protein 6 isoform X1 [Dama dama].
ACCESSION   XP_061014823
VERSION     XP_061014823.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158840.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..228
                     /product="AN1-type zinc finger protein 6 isoform X1"
                     /calculated_mol_wt=24546
     Region          12..35
                     /region_name="zf-A20"
                     /note="A20-like zinc finger; pfam01754"
                     /db_xref="CDD:460313"
     Region          169..206
                     /region_name="ZnF_AN1"
                     /note="AN1-like Zinc finger; smart00154"
                     /db_xref="CDD:197545"
     CDS             1..228
                     /gene="ZFAND6"
                     /coded_by="XM_061158840.1:317..1003"
                     /db_xref="GeneID:133067853"
ORIGIN      
        1 maqetnhsqv pmlcstgcgf ygnprtngmc svcykehlqr qnssngrisp pdkvparpgh
       61 rvtnvrcgpv aapsvtslse slpvqctdgs vpeaqsalds tassmqpspv snqsllsesv
      121 assqvdstsv dkaipetedl qasisetaqq aseeqsksle kpkqkknrcf mcrkkvgltg
      181 fecrcgnvyc gvhrysdvhn csynykadaa ekirkenpvv vgekiqki
//
LOCUS       XP_061014824             228 aa            linear   MAM 02-DEC-2023
DEFINITION  AN1-type zinc finger protein 6 isoform X1 [Dama dama].
ACCESSION   XP_061014824
VERSION     XP_061014824.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158841.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..228
                     /product="AN1-type zinc finger protein 6 isoform X1"
                     /calculated_mol_wt=24546
     Region          12..35
                     /region_name="zf-A20"
                     /note="A20-like zinc finger; pfam01754"
                     /db_xref="CDD:460313"
     Region          169..206
                     /region_name="ZnF_AN1"
                     /note="AN1-like Zinc finger; smart00154"
                     /db_xref="CDD:197545"
     CDS             1..228
                     /gene="ZFAND6"
                     /coded_by="XM_061158841.1:253..939"
                     /db_xref="GeneID:133067853"
ORIGIN      
        1 maqetnhsqv pmlcstgcgf ygnprtngmc svcykehlqr qnssngrisp pdkvparpgh
       61 rvtnvrcgpv aapsvtslse slpvqctdgs vpeaqsalds tassmqpspv snqsllsesv
      121 assqvdstsv dkaipetedl qasisetaqq aseeqsksle kpkqkknrcf mcrkkvgltg
      181 fecrcgnvyc gvhrysdvhn csynykadaa ekirkenpvv vgekiqki
//
LOCUS       XP_061014825             228 aa            linear   MAM 02-DEC-2023
DEFINITION  AN1-type zinc finger protein 6 isoform X1 [Dama dama].
ACCESSION   XP_061014825
VERSION     XP_061014825.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158842.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..228
                     /product="AN1-type zinc finger protein 6 isoform X1"
                     /calculated_mol_wt=24546
     Region          12..35
                     /region_name="zf-A20"
                     /note="A20-like zinc finger; pfam01754"
                     /db_xref="CDD:460313"
     Region          169..206
                     /region_name="ZnF_AN1"
                     /note="AN1-like Zinc finger; smart00154"
                     /db_xref="CDD:197545"
     CDS             1..228
                     /gene="ZFAND6"
                     /coded_by="XM_061158842.1:231..917"
                     /db_xref="GeneID:133067853"
ORIGIN      
        1 maqetnhsqv pmlcstgcgf ygnprtngmc svcykehlqr qnssngrisp pdkvparpgh
       61 rvtnvrcgpv aapsvtslse slpvqctdgs vpeaqsalds tassmqpspv snqsllsesv
      121 assqvdstsv dkaipetedl qasisetaqq aseeqsksle kpkqkknrcf mcrkkvgltg
      181 fecrcgnvyc gvhrysdvhn csynykadaa ekirkenpvv vgekiqki
//
LOCUS       XP_061014826             228 aa            linear   MAM 02-DEC-2023
DEFINITION  AN1-type zinc finger protein 6 isoform X1 [Dama dama].
ACCESSION   XP_061014826
VERSION     XP_061014826.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158843.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..228
                     /product="AN1-type zinc finger protein 6 isoform X1"
                     /calculated_mol_wt=24546
     Region          12..35
                     /region_name="zf-A20"
                     /note="A20-like zinc finger; pfam01754"
                     /db_xref="CDD:460313"
     Region          169..206
                     /region_name="ZnF_AN1"
                     /note="AN1-like Zinc finger; smart00154"
                     /db_xref="CDD:197545"
     CDS             1..228
                     /gene="ZFAND6"
                     /coded_by="XM_061158843.1:146..832"
                     /db_xref="GeneID:133067853"
ORIGIN      
        1 maqetnhsqv pmlcstgcgf ygnprtngmc svcykehlqr qnssngrisp pdkvparpgh
       61 rvtnvrcgpv aapsvtslse slpvqctdgs vpeaqsalds tassmqpspv snqsllsesv
      121 assqvdstsv dkaipetedl qasisetaqq aseeqsksle kpkqkknrcf mcrkkvgltg
      181 fecrcgnvyc gvhrysdvhn csynykadaa ekirkenpvv vgekiqki
//
LOCUS       XP_061014827             228 aa            linear   MAM 02-DEC-2023
DEFINITION  AN1-type zinc finger protein 6 isoform X1 [Dama dama].
ACCESSION   XP_061014827
VERSION     XP_061014827.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158844.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..228
                     /product="AN1-type zinc finger protein 6 isoform X1"
                     /calculated_mol_wt=24546
     Region          12..35
                     /region_name="zf-A20"
                     /note="A20-like zinc finger; pfam01754"
                     /db_xref="CDD:460313"
     Region          169..206
                     /region_name="ZnF_AN1"
                     /note="AN1-like Zinc finger; smart00154"
                     /db_xref="CDD:197545"
     CDS             1..228
                     /gene="ZFAND6"
                     /coded_by="XM_061158844.1:104..790"
                     /db_xref="GeneID:133067853"
ORIGIN      
        1 maqetnhsqv pmlcstgcgf ygnprtngmc svcykehlqr qnssngrisp pdkvparpgh
       61 rvtnvrcgpv aapsvtslse slpvqctdgs vpeaqsalds tassmqpspv snqsllsesv
      121 assqvdstsv dkaipetedl qasisetaqq aseeqsksle kpkqkknrcf mcrkkvgltg
      181 fecrcgnvyc gvhrysdvhn csynykadaa ekirkenpvv vgekiqki
//
LOCUS       XP_061014828             208 aa            linear   MAM 02-DEC-2023
DEFINITION  AN1-type zinc finger protein 6 isoform X2 [Dama dama].
ACCESSION   XP_061014828
VERSION     XP_061014828.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158845.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..208
                     /product="AN1-type zinc finger protein 6 isoform X2"
                     /calculated_mol_wt=22434
     Region          12..35
                     /region_name="zf-A20"
                     /note="A20-like zinc finger; pfam01754"
                     /db_xref="CDD:460313"
     Region          149..186
                     /region_name="ZnF_AN1"
                     /note="AN1-like Zinc finger; smart00154"
                     /db_xref="CDD:197545"
     CDS             1..208
                     /gene="ZFAND6"
                     /coded_by="XM_061158845.1:392..1018"
                     /db_xref="GeneID:133067853"
ORIGIN      
        1 maqetnhsqv pmlcstgcgf ygnprtngmc svcykehlqr qnssngrisp papsvtslse
       61 slpvqctdgs vpeaqsalds tassmqpspv snqsllsesv assqvdstsv dkaipetedl
      121 qasisetaqq aseeqsksle kpkqkknrcf mcrkkvgltg fecrcgnvyc gvhrysdvhn
      181 csynykadaa ekirkenpvv vgekiqki
//
LOCUS       XP_061014829             228 aa            linear   MAM 02-DEC-2023
DEFINITION  AN1-type zinc finger protein 6 isoform X1 [Dama dama].
ACCESSION   XP_061014829
VERSION     XP_061014829.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158846.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..228
                     /product="AN1-type zinc finger protein 6 isoform X1"
                     /calculated_mol_wt=24546
     Region          12..35
                     /region_name="zf-A20"
                     /note="A20-like zinc finger; pfam01754"
                     /db_xref="CDD:460313"
     Region          169..206
                     /region_name="ZnF_AN1"
                     /note="AN1-like Zinc finger; smart00154"
                     /db_xref="CDD:197545"
     CDS             1..228
                     /gene="ZFAND6"
                     /coded_by="XM_061158846.1:184..870"
                     /db_xref="GeneID:133067853"
ORIGIN      
        1 maqetnhsqv pmlcstgcgf ygnprtngmc svcykehlqr qnssngrisp pdkvparpgh
       61 rvtnvrcgpv aapsvtslse slpvqctdgs vpeaqsalds tassmqpspv snqsllsesv
      121 assqvdstsv dkaipetedl qasisetaqq aseeqsksle kpkqkknrcf mcrkkvgltg
      181 fecrcgnvyc gvhrysdvhn csynykadaa ekirkenpvv vgekiqki
//
LOCUS       XP_061014830             717 aa            linear   MAM 02-DEC-2023
DEFINITION  aryl hydrocarbon receptor nuclear translocator 2 isoform X1 [Dama
            dama].
ACCESSION   XP_061014830
VERSION     XP_061014830.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158847.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..717
                     /product="aryl hydrocarbon receptor nuclear translocator 2
                     isoform X1"
                     /calculated_mol_wt=78444
     Region          62..124
                     /region_name="bHLH-PAS_ARNT"
                     /note="basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS)
                     domain found in aryl hydrocarbon receptor nuclear
                     translocator (ARNT) and similar proteins; cd18947"
                     /db_xref="CDD:381517"
     Site            order(64..65,68..69,72,75..76,80,101..102)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381517"
     Site            order(79,82,85..86,103,106..107,110,112..114,116)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381517"
     Region          137..243
                     /region_name="PAS"
                     /note="PAS fold; pfam00989"
                     /db_xref="CDD:395786"
     Region          336..436
                     /region_name="PAS_11"
                     /note="PAS domain; pfam14598"
                     /db_xref="CDD:464214"
     CDS             1..717
                     /gene="ARNT2"
                     /coded_by="XM_061158847.1:40..2193"
                     /db_xref="GeneID:133067854"
ORIGIN      
        1 matpaavnpp emasdipgsv tlpvapmaat gqvrmagamp arggkrrsgm dfddedgegp
       61 skfsrenhse ierrrrnkmt qyitelsdmv ptcsalarkp dkltilrmav shmksmrgtg
      121 nkstdgaykp sflteqelkh lileaadgfl fvvaaetgrv iyvsdsvtpv lnqpqsewfg
      181 stlyeqvhpd dveklreqlc tsensmtgri ldlktgtvkk egqqssmrmc mgsrrsficr
      241 mrcgnapldh lplnrlttmr krfrnglgpv kegeaqyavv hctgyikawp pagmtipeed
      301 advgqgskyc lvaigrlqvt sspvcmdmsg msvpteflsr hnsdgiitfv dprcisvigy
      361 qpqdllgkdi lefchsedqs hlresfqqvv klkgqvlsvm yrfrtknrew vlirtssftf
      421 qnpysdeiey iictntnvkq lqqqqaelev hqrdglssyd lsqvpvpnlp agvhdagksv
      481 ekadaifsqe rdprfaemfa gisasekkmm ssasaagtqq iysqgspfpa ghsgkafssa
      541 vvhvpgvndi qsssstsqnm sqisrqlnqs qvawtgsrpp fpgqqipsqs sktqsspfgi
      601 gtshtypadp ssysplsspa tsspsgnays slanrtpgfa esgqssgqfq grpsevwsqw
      661 qsqhhgqqsg ephshqqpgq tevfqdmlpm pgdptqgtgn yniedfadlg mfppfse
//
LOCUS       XP_061014831             712 aa            linear   MAM 02-DEC-2023
DEFINITION  aryl hydrocarbon receptor nuclear translocator 2 isoform X2 [Dama
            dama].
ACCESSION   XP_061014831
VERSION     XP_061014831.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158848.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..712
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..712
                     /product="aryl hydrocarbon receptor nuclear translocator 2
                     isoform X2"
                     /calculated_mol_wt=77891
     Region          62..124
                     /region_name="bHLH-PAS_ARNT"
                     /note="basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS)
                     domain found in aryl hydrocarbon receptor nuclear
                     translocator (ARNT) and similar proteins; cd18947"
                     /db_xref="CDD:381517"
     Site            order(64..65,68..69,72,75..76,80,101..102)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381517"
     Site            order(79,82,85..86,103,106..107,110,112..114,116)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381517"
     Region          137..243
                     /region_name="PAS"
                     /note="PAS fold; pfam00989"
                     /db_xref="CDD:395786"
     Region          336..436
                     /region_name="PAS_11"
                     /note="PAS domain; pfam14598"
                     /db_xref="CDD:464214"
     CDS             1..712
                     /gene="ARNT2"
                     /coded_by="XM_061158848.1:40..2178"
                     /db_xref="GeneID:133067854"
ORIGIN      
        1 matpaavnpp emasdipgsv tlpvapmaat gqvrmagamp arggkrrsgm dfddedgegp
       61 skfsrenhse ierrrrnkmt qyitelsdmv ptcsalarkp dkltilrmav shmksmrgtg
      121 nkstdgaykp sflteqelkh lileaadgfl fvvaaetgrv iyvsdsvtpv lnqpqsewfg
      181 stlyeqvhpd dveklreqlc tsensmtgri ldlktgtvkk egqqssmrmc mgsrrsficr
      241 mrcgnapldh lplnrlttmr krfrnglgpv kegeaqyavv hctgyikawp pagmtipeed
      301 advgqgskyc lvaigrlqvt sspvcmdmsg msvpteflsr hnsdgiitfv dprcisvigy
      361 qpqdllgkdi lefchsedqs hlresfqqvv klkgqvlsvm yrfrtknrew vlirtssftf
      421 qnpysdeiey iictntnvkq lqqqqaelev hqrdglssyd lsqvpvpnlp agvhdagksv
      481 ekadaifsqe rdprfaemfa gisasekkmm ssasaagtqq iysqgspfpa ghsgkafssa
      541 vvhvpgvndi qsssstsqnm sqisrqlnqs qvawtgsrpp fpgqssktqs spfgigtsht
      601 ypadpssysp lsspatssps gnaysslanr tpgfaesgqs sgqfqgrpse vwsqwqsqhh
      661 gqqsgephsh qqpgqtevfq dmlpmpgdpt qgtgnynied fadlgmfppf se
//
LOCUS       XP_061014832             709 aa            linear   MAM 02-DEC-2023
DEFINITION  aryl hydrocarbon receptor nuclear translocator 2 isoform X3 [Dama
            dama].
ACCESSION   XP_061014832
VERSION     XP_061014832.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158849.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..709
                     /product="aryl hydrocarbon receptor nuclear translocator 2
                     isoform X3"
                     /calculated_mol_wt=77631
     Region          62..124
                     /region_name="bHLH-PAS_ARNT"
                     /note="basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS)
                     domain found in aryl hydrocarbon receptor nuclear
                     translocator (ARNT) and similar proteins; cd18947"
                     /db_xref="CDD:381517"
     Site            order(64..65,68..69,72,75..76,80,101..102)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381517"
     Site            order(79,82,85..86,103,106..107,110,112..114,116)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381517"
     Region          137..243
                     /region_name="PAS"
                     /note="PAS fold; pfam00989"
                     /db_xref="CDD:395786"
     Region          336..436
                     /region_name="PAS_11"
                     /note="PAS domain; pfam14598"
                     /db_xref="CDD:464214"
     CDS             1..709
                     /gene="ARNT2"
                     /coded_by="XM_061158849.1:40..2169"
                     /db_xref="GeneID:133067854"
ORIGIN      
        1 matpaavnpp emasdipgsv tlpvapmaat gqvrmagamp arggkrrsgm dfddedgegp
       61 skfsrenhse ierrrrnkmt qyitelsdmv ptcsalarkp dkltilrmav shmksmrgtg
      121 nkstdgaykp sflteqelkh lileaadgfl fvvaaetgrv iyvsdsvtpv lnqpqsewfg
      181 stlyeqvhpd dveklreqlc tsensmtgri ldlktgtvkk egqqssmrmc mgsrrsficr
      241 mrcgnapldh lplnrlttmr krfrnglgpv kegeaqyavv hctgyikawp pagmtipeed
      301 advgqgskyc lvaigrlqvt sspvcmdmsg msvpteflsr hnsdgiitfv dprcisvigy
      361 qpqdllgkdi lefchsedqs hlresfqqvv klkgqvlsvm yrfrtknrew vlirtssftf
      421 qnpysdeiey iictntnvkq lqqqqaelev hqrdglssyd lsqvpvpnlp agvhdagksv
      481 ekadaifsqe rdprfaemfa gisasekkmm ssasaagtqq iysqgspfpa ghsgkafssa
      541 vvhvpgvndi qsssstsqnm sqisrqlnqs qvawtgsrpp fpgqqipsqs sktqsspfgi
      601 gtshtypadp ssysplsspa tsspsgnays slanrtpgfa esgqssgqfq grpsevwsqw
      661 qsqhhgqqsg ephshqqpgq tevfqvnqra ppsrhaahar rsnpgdrql
//
LOCUS       XP_061014833             330 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha/beta hydrolase domain-containing protein 17C [Dama dama].
ACCESSION   XP_061014833
VERSION     XP_061014833.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158850.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..330
                     /product="alpha/beta hydrolase domain-containing protein
                     17C"
                     /calculated_mol_wt=35861
     Region          109..327
                     /region_name="FrsA"
                     /note="Fermentation-respiration switch esterase FrsA,
                     DUF1100 family [Signal transduction mechanisms]; COG1073"
                     /db_xref="CDD:440691"
     CDS             1..330
                     /gene="ABHD17C"
                     /coded_by="XM_061158850.1:24..1016"
                     /db_xref="GeneID:133067856"
ORIGIN      
        1 mpepgprmng fslgelcwlf ccppcpsria aklaflppep tytvlapeqr gpgapapasa
       61 astssasaaa qpapqqqpee ggagpgacsl hlseradwqy sqreldavev ffsrtardnr
      121 lgcmfvrcap ssrytllfsh gnavdlgqmc sfyiglgsri ncnifsydys gygvssgkps
      181 eknlyadida awqalrtryg vspeniilyg qsigtvptvd lasryecaav ilhsplmsgl
      241 rvafpdtrkt ycfdafpsid kiskvtspvl vihgtedevi dfshglamye rcpraveplw
      301 vegaghndie lyaqylerlk qfishelpns
//
LOCUS       XP_061014834            1433 aa            linear   MAM 02-DEC-2023
DEFINITION  cell migration-inducing and hyaluronan-binding protein isoform X1
            [Dama dama].
ACCESSION   XP_061014834
VERSION     XP_061014834.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158851.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1433
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1433
                     /product="cell migration-inducing and hyaluronan-binding
                     protein isoform X1"
                     /calculated_mol_wt=160658
     Region          112..237
                     /region_name="G8"
                     /note="G8 domain; pfam10162"
                     /db_xref="CDD:462971"
     Region          213..375
                     /region_name="PANDER_like_TMEM2"
                     /note="PANDER-like domain of the transmembrane protein
                     TMEM2; cd13938"
                     /db_xref="CDD:260112"
     Region          397..475
                     /region_name="Mucin2_WxxW"
                     /note="Mucin-2 protein WxxW repeating region; pfam13330"
                     /db_xref="CDD:463846"
     Region          1277..1433
                     /region_name="PANDER_like"
                     /note="Domains similar to the Pancreatic-derived factor;
                     cl19122"
                     /db_xref="CDD:473142"
     CDS             1..1433
                     /gene="CEMIP"
                     /coded_by="XM_061158851.1:2320..6621"
                     /db_xref="GeneID:133067857"
ORIGIN      
        1 mtglacpdll npeswqlrtr hwlaggcpcw lglcvctcpv clcvclphtl tpawqacrsd
       61 smcfcfrehs armgaahrpd vsfrvmltig wfilahfpgt asmgsaecpd qwpelqpwnp
      121 ghdpahyvyi gqgralllts satvysiris eggklvikdq deaivlrtrh ilidsggelh
      181 agsalcpfqg nfsivlygra ddgiqldpyf glkyigvdrg gtlelhgqkk vswtflnktl
      241 hpggleeggy fferswghrg vivhvidpks gtvihsdrfd tyrskkeser laqylnavpn
      301 grilsvavnd egsrnlddva rkamtklgsk hflhlgfrhp wsfltvkgnp sssvedhiey
      361 hghhgsaaar vfklfrtehg elfnvsssse wvqdvewtew fehdqvpytk ggekisdlgv
      421 thpgkicnrp idiqattldg vnlttevvyk kgqdyrfvcy drgqvcqsyr vrflcgkpvr
      481 pkltvtidtn vnstilhlad nvqswkpgdt lvvastdysm yqaeefqvlp crtcapnqvk
      541 vagkpmymht geeidgvdmr aevgllsrni vvmgemedec ypysnhlcnf fdfdtfgghi
      601 kfalgfkaah legvelkhmg qqligqypih fhlagdvdek ggydpptyvk dlsihhtfsr
      661 cvtvhgsngl lvkdvvgyns lghcfftedg peerntfdhc lgllvksgtl lpsdrdskmc
      721 ktitedsypg yipkprqdcn avstfwmanp nnnlincaaa gseetgfwfi fhhvptgpsa
      781 gmyspgyseh iplgkflnnr ahsnyragmi idngvkttqa sakdkrpfls iisarysphq
      841 dadplkprep aiikhftayk nqdhgawlrg gdvwldscrf adngigltla sggtfpyddg
      901 skqeiknslf vgesgnvgte mmdnriwgpg gldhsgrtlp igqnfpirgi qfydgpiniq
      961 nctfrkfaal egrhtsalaf rlnnawqscp hnnvtniafe dvpitsrvff gepgpwfnql
     1021 dmdgdktsvf hdvdgsvsey pgsyltkndn wlvrhpdcin vpdwrgaics gryaqmyiqa
     1081 yktsnlrmki ikndfpnhpl ylegaltrst hyqqyqpvit lqkgytihwd qtapseltiw
     1141 linfnkgdwi rvglcyprgt tfsilsdvhn rllkqtsktg ifvktsqmdk veqshpgrsh
     1201 yywdedsgll flklkaqner ekfafcsvkg cerikikali pknagisdca ataypkftek
     1261 aivdvpmpkk lfgsllktkd hflevkmesa kqrffhllnd layiqvdgkk ypsvedgiqv
     1321 vvidgrhgqv rnhtgfrsav lqgipwqlfn yvatipdnsi vlmaskgryi srgpwtrvle
     1381 klgadkglkl kekmvfvgfk gsfrptwvtl dtedhhakif qvvpipvvrk kkl
//
LOCUS       XP_061014835            1361 aa            linear   MAM 02-DEC-2023
DEFINITION  cell migration-inducing and hyaluronan-binding protein isoform X2
            [Dama dama].
ACCESSION   XP_061014835
VERSION     XP_061014835.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158852.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1361
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1361
                     /product="cell migration-inducing and hyaluronan-binding
                     protein isoform X2"
                     /calculated_mol_wt=152618
     Region          40..165
                     /region_name="G8"
                     /note="G8 domain; pfam10162"
                     /db_xref="CDD:462971"
     Region          141..303
                     /region_name="PANDER_like_TMEM2"
                     /note="PANDER-like domain of the transmembrane protein
                     TMEM2; cd13938"
                     /db_xref="CDD:260112"
     Region          325..403
                     /region_name="Mucin2_WxxW"
                     /note="Mucin-2 protein WxxW repeating region; pfam13330"
                     /db_xref="CDD:463846"
     Region          1205..1361
                     /region_name="PANDER_like"
                     /note="Domains similar to the Pancreatic-derived factor;
                     cl19122"
                     /db_xref="CDD:473142"
     CDS             1..1361
                     /gene="CEMIP"
                     /coded_by="XM_061158852.1:168..4253"
                     /db_xref="GeneID:133067857"
ORIGIN      
        1 mgaahrpdvs frvmltigwf ilahfpgtas mgsaecpdqw pelqpwnpgh dpahyvyigq
       61 grallltssa tvysiriseg gklvikdqde aivlrtrhil idsggelhag salcpfqgnf
      121 sivlygradd giqldpyfgl kyigvdrggt lelhgqkkvs wtflnktlhp ggleeggyff
      181 erswghrgvi vhvidpksgt vihsdrfdty rskkeserla qylnavpngr ilsvavndeg
      241 srnlddvark amtklgskhf lhlgfrhpws fltvkgnpss svedhieyhg hhgsaaarvf
      301 klfrtehgel fnvssssewv qdvewtewfe hdqvpytkgg ekisdlgvth pgkicnrpid
      361 iqattldgvn lttevvykkg qdyrfvcydr gqvcqsyrvr flcgkpvrpk ltvtidtnvn
      421 stilhladnv qswkpgdtlv vastdysmyq aeefqvlpcr tcapnqvkva gkpmymhtge
      481 eidgvdmrae vgllsrnivv mgemedecyp ysnhlcnffd fdtfgghikf algfkaahle
      541 gvelkhmgqq ligqypihfh lagdvdekgg ydpptyvkdl sihhtfsrcv tvhgsngllv
      601 kdvvgynslg hcfftedgpe erntfdhclg llvksgtllp sdrdskmckt itedsypgyi
      661 pkprqdcnav stfwmanpnn nlincaaags eetgfwfifh hvptgpsagm yspgysehip
      721 lgkflnnrah snyragmiid ngvkttqasa kdkrpflsii sarysphqda dplkprepai
      781 ikhftayknq dhgawlrggd vwldscrfad ngigltlasg gtfpyddgsk qeiknslfvg
      841 esgnvgtemm dnriwgpggl dhsgrtlpig qnfpirgiqf ydgpiniqnc tfrkfaaleg
      901 rhtsalafrl nnawqscphn nvtniafedv pitsrvffge pgpwfnqldm dgdktsvfhd
      961 vdgsvseypg syltkndnwl vrhpdcinvp dwrgaicsgr yaqmyiqayk tsnlrmkiik
     1021 ndfpnhplyl egaltrsthy qqyqpvitlq kgytihwdqt apseltiwli nfnkgdwirv
     1081 glcyprgttf silsdvhnrl lkqtsktgif vktsqmdkve qshpgrshyy wdedsgllfl
     1141 klkaqnerek fafcsvkgce rikikalipk nagisdcaat aypkftekai vdvpmpkklf
     1201 gsllktkdhf levkmesakq rffhllndla yiqvdgkkyp svedgiqvvv idgrhgqvrn
     1261 htgfrsavlq gipwqlfnyv atipdnsivl maskgryisr gpwtrvlekl gadkglklke
     1321 kmvfvgfkgs frptwvtldt edhhakifqv vpipvvrkkk l
//
LOCUS       XP_061014836             232 aa            linear   MAM 02-DEC-2023
DEFINITION  LRP chaperone MESD [Dama dama].
ACCESSION   XP_061014836
VERSION     XP_061014836.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158853.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..232
                     /product="LRP chaperone MESD"
                     /calculated_mol_wt=25843
     Region          50..200
                     /region_name="Mesd"
                     /note="Chaperone for wingless signalling and trafficking
                     of LDL receptor; pfam10185"
                     /db_xref="CDD:462985"
     CDS             1..232
                     /gene="MESD"
                     /coded_by="XM_061158853.1:65..763"
                     /db_xref="GeneID:133067858"
ORIGIN      
        1 maasgwaraa vvflcacdli lllllppraf ategpaetpg eatppprkkk kdirdyndad
       61 marlleqwek dddieegdlp ehkrpsapid fsqidpgkpe silkmtkkgk tlmmfvtvsg
      121 npteketeei tslwqgslfn anydvqrfiv gsdraifmlr dggyaweikd flvsqdrcad
      181 vtlegqvypg kgggskeknq tkqekgkkkk erdpkprask ednragskre el
//
LOCUS       XP_061014837             362 aa            linear   MAM 02-DEC-2023
DEFINITION  talin rod domain-containing protein 1 [Dama dama].
ACCESSION   XP_061014837
VERSION     XP_061014837.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158854.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..362
                     /product="talin rod domain-containing protein 1"
                     /calculated_mol_wt=37643
     CDS             1..362
                     /gene="TLNRD1"
                     /coded_by="XM_061158854.1:1315..2403"
                     /db_xref="GeneID:133067859"
ORIGIN      
        1 masgsagkps veaaspapas avggassqpr krlvsvcdhc kgkmqlvadl lllssearpv
       61 lfegpasaca gtesfeqcrd tiiartkgls ilthdvqsql nmgrfgeagd slvelgdlvv
      121 sltecsahaa ylaavatpga qpaqpglvdr yrvtrcrhev eqgcavlrat pladmtpqll
      181 levsqglsrn lkfltdacal asdksrdrfs reqfklgvkc mstsasalla cvrevkaaps
      241 elarsrcalf sgplvqavga lvgfatepqf lgraaavsae gkavqtailg gamsvvsacv
      301 lltqclrdla qhpdggakms dhrerlrnsa cavsegctll sqalrerssp rtlppvnsns
      361 vn
//
LOCUS       XP_061014838            1326 aa            linear   MAM 02-DEC-2023
DEFINITION  pro-interleukin-16 isoform X1 [Dama dama].
ACCESSION   XP_061014838
VERSION     XP_061014838.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158855.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1326
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1326
                     /product="pro-interleukin-16 isoform X1"
                     /calculated_mol_wt=141050
     Region          215..300
                     /region_name="PDZ3_PDZD2-PDZ1_hPro-IL-16-like"
                     /note="PDZ domain 3 of PDZ domain containing 2 (PDZD2),
                     PDZ domain 1 of human pro-interleukin-16 (isoform 1, 1332
                     AA), and related domains; cd06759"
                     /db_xref="CDD:467240"
     Site            order(226..232,247,250,280,284,287..288)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467240"
     Region          350..439
                     /region_name="PDZ4_PDZD2-PDZ2_hPro-IL-16-like"
                     /note="PDZ domain 4 of PDZ domain containing 2 (PDZD2),
                     PDZ domain 2 of human pro-interleukin-16 (isoform 1, 1332
                     AA), and related domains; cd06760"
                     /db_xref="CDD:467241"
     Site            order(365..371,385,388,418,422,425..426)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467241"
     Region          <645..1044
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1107..1192
                     /region_name="PDZ6_PDZD2-PDZ3_hPro-IL-16-like"
                     /note="PDZ domain 6 of PDZ domain containing 2 (PDZD2),
                     PDZ domain 3 of human pro-interleukin-16 (isoform 1, 1332
                     AA), and related domains; cd06762"
                     /db_xref="CDD:467243"
     Site            order(1119..1125,1138,1141,1171,1175,1178..1179)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467243"
     Region          1226..1311
                     /region_name="PDZ7_PDZD2-PDZ4_hPro-IL-16-like"
                     /note="PDZ domain 7 of PDZ domain containing 2 (PDZD2),
                     PDZ domain 4 of human pro-interleukin-16 (isoform 1, 1332
                     AA), and related domains; cd06763"
                     /db_xref="CDD:467244"
     Site            order(1237..1243,1258,1261,1291,1295,1298..1299)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467244"
     CDS             1..1326
                     /gene="IL16"
                     /coded_by="XM_061158855.1:92..4072"
                     /db_xref="GeneID:133067860"
ORIGIN      
        1 mephsrsgks rkstklrsis rslilcnaqt sddssspder ypdpfeislg qgkegifhss
       61 vqladtseaa prsipdltls seaaqlqaag ndrgkacrrm ffmketsmts sreksgkldp
      121 qsnnflfpka chqrtrsnst svnpyctget dfpmtkkssa stdrqpyslc sgrkslsqql
      181 dfsaakfvgl srptrslsta qlvqpsgglq asvisnivlm kgqakglgfs ivggkdsiyg
      241 pigiyvktif aggaaaadgr lqegdeilel ngesmaglth qdalqkfkqa kkglltltvr
      301 trltaphslg shlspplcrs lssstcitkd cgpfvlespg apasstkpnd rilvevslkk
      361 eagvglgigl csipyfqcis gifvhtlspg svahldgrlr cgdelveind spvhcmtlne
      421 vyailshcnp gpipimvsrh pdpqvselql keavaqaven vkfgkerhqw slegvkrles
      481 swhgrptlek erdknsapph rraqkvmirs ssdssymsgs pggspsssge qppsdlevsa
      541 hspslplgre pgvppgasar hpqenlplpa sqgshpplrl kksfeilvrk ptsskpkppp
      601 rkyfksysdp qksleerkds vcpsghtlpt cgqearellp ppppqedaag rtphaaadhp
      661 gpavgphtts lsegqpgrra aspgtqtspv khpllrrqar mdyslettae dpwvrisdci
      721 knlfspimse nhnhvplppd aprgeedgmr ghpdgaatkl dttgggpkay kpaggstmkk
      781 gppvapkpaw frqslrglsn rapdsrrema ascqpspssr erpgpppras ssikqrissf
      841 etfgsayppd rgaqrlslqa ssssgeaael pgkqeggras gpsgrgappt meqqrpepeq
      901 llpaspatpe asdpsvsghp aleqqpgqkt vsldpdplsr llatqmegpr gpvikmpsqr
      961 arsfplsrtq scemkpldek tsklysissq vssavmksll clpsslsfgq tpcspkegvl
     1021 ppaafgedpt nssaeapasd tgfslnlsel reyteglnes teandcdhct pqpgqsvisl
     1081 lsteelkkli eevkvldeat lkqldsihvt ilhkeegagl gfslaggadl enkvitvhrv
     1141 fpnglasqeg tiqkgnevls ingkslkgat hndalailrq areprqaviv trrptleatt
     1201 dlnsstdssg sasvasdisi eseatvctvt lektsaglgf sleggkgslh gdkpltvnri
     1261 fkgvaseqsd tvqpgdeilh lagtamqglt rfeawniika lpdgpvtivl rrkslqskgt
     1321 paagdp
//
LOCUS       XP_061014839            1374 aa            linear   MAM 02-DEC-2023
DEFINITION  pro-interleukin-16 isoform X2 [Dama dama].
ACCESSION   XP_061014839
VERSION     XP_061014839.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158856.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1374
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1374
                     /product="pro-interleukin-16 isoform X2"
                     /calculated_mol_wt=146527
     Region          262..347
                     /region_name="PDZ3_PDZD2-PDZ1_hPro-IL-16-like"
                     /note="PDZ domain 3 of PDZ domain containing 2 (PDZD2),
                     PDZ domain 1 of human pro-interleukin-16 (isoform 1, 1332
                     AA), and related domains; cd06759"
                     /db_xref="CDD:467240"
     Site            order(273..279,294,297,327,331,334..335)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467240"
     Region          397..486
                     /region_name="PDZ4_PDZD2-PDZ2_hPro-IL-16-like"
                     /note="PDZ domain 4 of PDZ domain containing 2 (PDZD2),
                     PDZ domain 2 of human pro-interleukin-16 (isoform 1, 1332
                     AA), and related domains; cd06760"
                     /db_xref="CDD:467241"
     Site            order(412..418,432,435,465,469,472..473)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467241"
     Region          <692..1091
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1154..1239
                     /region_name="PDZ6_PDZD2-PDZ3_hPro-IL-16-like"
                     /note="PDZ domain 6 of PDZ domain containing 2 (PDZD2),
                     PDZ domain 3 of human pro-interleukin-16 (isoform 1, 1332
                     AA), and related domains; cd06762"
                     /db_xref="CDD:467243"
     Site            order(1166..1172,1185,1188,1218,1222,1225..1226)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467243"
     Region          1274..1359
                     /region_name="PDZ7_PDZD2-PDZ4_hPro-IL-16-like"
                     /note="PDZ domain 7 of PDZ domain containing 2 (PDZD2),
                     PDZ domain 4 of human pro-interleukin-16 (isoform 1, 1332
                     AA), and related domains; cd06763"
                     /db_xref="CDD:467244"
     Site            order(1285..1291,1306,1309,1339,1343,1346..1347)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467244"
     CDS             1..1374
                     /gene="IL16"
                     /coded_by="XM_061158856.1:107..4231"
                     /db_xref="GeneID:133067860"
ORIGIN      
        1 mslqkrvfpr kengthevva kpspvttrqp rardqerkkg sftsslrmep hsrsgksrks
       61 tklrsisrsl ilcnaqtsdd ssspderypd pfeislgqgk egifhssvql adtseaaprs
      121 ipdltlssea aqlqaagndr gkacrrmffm ketsmtssre ksgkldpqsn nflfpkachq
      181 rtrsnstsvn pyctgetdfp mtkkssastd rqpyslcsgr kslsqqldfs aakfvglsrp
      241 trslstaqlv qpsgglqasv isnivlmkgq akglgfsivg gkdsiygpig iyvktifagg
      301 aaaadgrlqe gdeilelnge smaglthqda lqkfkqakkg lltltvrtrl taphslgshl
      361 spplcrslss stcitkdcgp fvlespgapa sstkpndril vevslkkeag vglgiglcsi
      421 pyfqcisgif vhtlspgsva hldgrlrcgd elveindspv hcmtlnevya ilshcnpgpi
      481 pimvsrhpdp qvselqlkea vaqavenvkf gkerhqwsle gvkrlesswh grptlekerd
      541 knsapphrra qkvmirsssd ssymsgspgg spsssgeqpp sdlevsahsp slplgrepgv
      601 ppgasarhpq enlplpasqg shpplrlkks feilvrkpts skpkppprky fksysdpqks
      661 leerkdsvcp sghtlptcgq earellpppp pqedaagrtp haaadhpgpa vgphttslse
      721 gqpgrraasp gtqtspvkhp llrrqarmdy slettaedpw vrisdciknl fspimsenhn
      781 hvplppdapr geedgmrghp dgaatkldtt gggpkaykpa ggstmkkgpp vapkpawfrq
      841 slrglsnrap dsrremaasc qpspssrerp gppprasssi kqrissfetf gsayppdrga
      901 qrlslqasss sgeaaelpgk qeggrasgps grgapptmeq qrpepeqllp aspatpeasd
      961 psvsghpale qqpgqktvsl dpdplsrlla tqmegprgpv ikmpsqrars fplsrtqsce
     1021 mkpldektsk lysissqvss avmksllclp sslsfgqtpc spkegvlppa afgedptnss
     1081 aeapasdtgf slnlselrey teglnestea ndcdhctpqp gqsvisllst eelkklieev
     1141 kvldeatlkq ldsihvtilh keegaglgfs laggadlenk vitvhrvfpn glasqegtiq
     1201 kgnevlsing kslkgathnd alailrqare prqavivtrr ptleattdln sstdssgsas
     1261 vasdisiesa eatvctvtle ktsaglgfsl eggkgslhgd kpltvnrifk gvaseqsdtv
     1321 qpgdeilhla gtamqgltrf eawniikalp dgpvtivlrr kslqskgtpa agdp
//
LOCUS       XP_061014840             627 aa            linear   MAM 02-DEC-2023
DEFINITION  pro-interleukin-16 isoform X3 [Dama dama].
ACCESSION   XP_061014840
VERSION     XP_061014840.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158857.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..627
                     /product="pro-interleukin-16 isoform X3"
                     /calculated_mol_wt=66066
     Region          <36..221
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          407..492
                     /region_name="PDZ6_PDZD2-PDZ3_hPro-IL-16-like"
                     /note="PDZ domain 6 of PDZ domain containing 2 (PDZD2),
                     PDZ domain 3 of human pro-interleukin-16 (isoform 1, 1332
                     AA), and related domains; cd06762"
                     /db_xref="CDD:467243"
     Site            order(419..425,438,441,471,475,478..479)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467243"
     Region          527..612
                     /region_name="PDZ7_PDZD2-PDZ4_hPro-IL-16-like"
                     /note="PDZ domain 7 of PDZ domain containing 2 (PDZD2),
                     PDZ domain 4 of human pro-interleukin-16 (isoform 1, 1332
                     AA), and related domains; cd06763"
                     /db_xref="CDD:467244"
     Site            order(538..544,559,562,592,596,599..600)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467244"
     CDS             1..627
                     /gene="IL16"
                     /coded_by="XM_061158857.1:191..2074"
                     /db_xref="GeneID:133067860"
ORIGIN      
        1 mdyslettae dpwvrisdci knlfspimse nhnhvplppd aprgeedgmr ghpdgaatkl
       61 dttgggpkay kpaggstmkk gppvapkpaw frqslrglsn rapdsrrema ascqpspssr
      121 erpgpppras ssikqrissf etfgsayppd rgaqrlslqa ssssgeaael pgkqeggras
      181 gpsgrgappt meqqrpepeq llpaspatpe asdpsvsghp aleqqpgqkt vsldpdplsr
      241 llatqmegpr gpvikmpsqr arsfplsrtq scemkpldek tsklysissq vssavmksll
      301 clpsslsfgq tpcspkegvl ppaafgedpt nssaeapasd tgfslnlsel reyteglnes
      361 teandcdhct pqpgqsvisl lsteelkkli eevkvldeat lkqldsihvt ilhkeegagl
      421 gfslaggadl enkvitvhrv fpnglasqeg tiqkgnevls ingkslkgat hndalailrq
      481 areprqaviv trrptleatt dlnsstdssg sasvasdisi esaeatvctv tlektsaglg
      541 fsleggkgsl hgdkpltvnr ifkgvaseqs dtvqpgdeil hlagtamqgl trfeawniik
      601 alpdgpvtiv lrrkslqskg tpaagdp
//
LOCUS       XP_061014841             213 aa            linear   MAM 02-DEC-2023
DEFINITION  stAR-related lipid transfer protein 5 isoform X1 [Dama dama].
ACCESSION   XP_061014841
VERSION     XP_061014841.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158858.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..213
                     /product="stAR-related lipid transfer protein 5 isoform
                     X1"
                     /calculated_mol_wt=23425
     Region          4..211
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     Site            order(51,53,55,64..66,68..69,86,97,99,101,103,118,120,122,
                     132,134,155..156,158,160,172,174,176,178,189..193,
                     195..196,199..201,204)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176854"
     CDS             1..213
                     /gene="STARD5"
                     /coded_by="XM_061158858.1:122..763"
                     /db_xref="GeneID:133067861"
ORIGIN      
        1 mdpataaqvs eavaekmlqy rrdnsgwkic regngvsvsw rpsvefpgnl yrgkgivngt
       61 peqvwdcvkp lagtlraqwd envnsfeiie sltdtllfsr tttpsavmkl isprdfvdlv
      121 lvrtyedgti ssnatnvehp scppkpgyvr gfnhpcgcfc eplpgepnkt slvtffqtdl
      181 sgylpqgvvd sffprsmagf yanlekavkk ffg
//
LOCUS       XP_061014842             188 aa            linear   MAM 02-DEC-2023
DEFINITION  stAR-related lipid transfer protein 5 isoform X2 [Dama dama].
ACCESSION   XP_061014842
VERSION     XP_061014842.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158859.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..188
                     /product="stAR-related lipid transfer protein 5 isoform
                     X2"
                     /calculated_mol_wt=20516
     Region          9..186
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     Site            order(26,28,30,39..41,43..44,61,72,74,76,78,93,95,97,107,
                     109,130..131,133,135,147,149,151,153,164..168,170..171,
                     174..176,179)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176854"
     CDS             1..188
                     /gene="STARD5"
                     /coded_by="XM_061158859.1:122..688"
                     /db_xref="GeneID:133067861"
ORIGIN      
        1 mdpataaqng vsvswrpsve fpgnlyrgkg ivngtpeqvw dcvkplagtl raqwdenvns
       61 feiiesltdt llfsrtttps avmklisprd fvdlvlvrty edgtissnat nvehpscppk
      121 pgyvrgfnhp cgcfceplpg epnktslvtf fqtdlsgylp qgvvdsffpr smagfyanle
      181 kavkkffg
//
LOCUS       XP_061014843             688 aa            linear   MAM 02-DEC-2023
DEFINITION  U3 small nucleolar ribonucleoprotein protein MPP10 [Dama dama].
ACCESSION   XP_061014843
VERSION     XP_061014843.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158860.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..688
                     /product="U3 small nucleolar ribonucleoprotein protein
                     MPP10"
                     /calculated_mol_wt=79549
     Region          25..580
                     /region_name="Mpp10"
                     /note="Mpp10 protein; pfam04006"
                     /db_xref="CDD:461128"
     CDS             1..688
                     /gene="MPHOSPH10"
                     /coded_by="XM_061158860.1:391..2457"
                     /db_xref="GeneID:133067862"
ORIGIN      
        1 mappawrrrt lerclrevgk atdrpecflt iqhelaskft sltkvlydfn kvlendrkhg
       61 spleklminn fddeqiwqql elqnepilqh fqsavsetie dedisllpes eeqeceedvm
      121 eleaagqedl eqdleeeeve eaeeeevsdl saddpdadqr atnssklhlr espdfsdens
      181 dldfdiskle rqskvqsrvp kpkqkpieks ivddkffkls emetflenme keeehrddqe
      241 eddvdffedm dsdedeglfg gqdlksgkss rnlkykdffd pvesdedvas vhddgnelas
      301 neeeeitege esisemdedd dleesgdskq hketskrvtf alpndedted knvlnvqkds
      361 devkssfekr qekmnekias lekellekkp wqlqgevtaq krpensllee tlhfdhavrm
      421 apviteettl qlediikqri rdqawddvvr kekpkedafe ykkrltldhe ksklslaeiy
      481 eqeyiklnqq ktaeeenpeh veiqkmmdsl flkldalsnf hfipkppvpe ikvvsnlpav
      541 tmeevapvsv sdaallapee vkeknkagdi ktaaektatd kkrerrkkky qkhlkikeke
      601 krrrlleknn pdqagrytka vaseklkqlt ktgkasllkd egkdkalkss qaffsklqdq
      661 vkmqisnakk tekkkkknqd isvhklkl
//
LOCUS       XP_061014844             179 aa            linear   MAM 02-DEC-2023
DEFINITION  methylmalonyl-CoA epimerase, mitochondrial [Dama dama].
ACCESSION   XP_061014844
VERSION     XP_061014844.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158861.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..179
                     /product="methylmalonyl-CoA epimerase, mitochondrial"
                     /calculated_mol_wt=18942
     Region          50..178
                     /region_name="metmalonyl_epim"
                     /note="methylmalonyl-CoA epimerase; TIGR03081"
                     /db_xref="CDD:213772"
     Site            order(51,54,56,63,67..68,70,72..75,96..97,99,120..121,123,
                     125..126,128,143,145,164,171..172)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:319912"
     Site            order(53,89,100,111,125,161,163,175,177)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:319912"
     CDS             1..179
                     /gene="MCEE"
                     /coded_by="XM_061158861.1:96..635"
                     /db_xref="GeneID:133067863"
ORIGIN      
        1 mlpkmarvlk vaaasaaglf prlwtpvstv rtctslsshp gagpvwnlgr lnhvaiavpd
       61 lekarafykn vlgaevgepv plpehgvsvv fvnlgntkme llhplgsdsp iagflkknka
      121 ggmhhvciev dninvavmdl kekkirilse eakigahgkp viflhpsdcg gvlveleqa
//
LOCUS       XP_061014845            1670 aa            linear   MAM 02-DEC-2023
DEFINITION  transient receptor potential cation channel subfamily M member 1
            isoform X1 [Dama dama].
ACCESSION   XP_061014845
VERSION     XP_061014845.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158862.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1670
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1670
                     /product="transient receptor potential cation channel
                     subfamily M member 1 isoform X1"
                     /calculated_mol_wt=189182
     Region          135..400
                     /region_name="LSDAT_euk"
                     /note="SLOG in TRPM; pfam18139"
                     /db_xref="CDD:465665"
     Region          <777..1174
                     /region_name="TRPV"
                     /note="Transient Receptor Potential channel, Vanilloid
                     subfamily (TRPV); cl40437"
                     /db_xref="CDD:454755"
     Region          1243..1298
                     /region_name="TRPM_tetra"
                     /note="tetramerization domain of TRPM; pfam16519"
                     /db_xref="CDD:465156"
     CDS             1..1670
                     /gene="TRPM1"
                     /coded_by="XM_061158862.1:2406..7418"
                     /db_xref="GeneID:133067865"
ORIGIN      
        1 mgahvllmwt pplkgwalls eppawpeeva ergqlhplgp vlgqgqkawi ektfckreci
       61 fvipstkdpn rcccgqltnq hipplpsvta skngeenkla evqpekwsvg khtqsyptds
      121 ygilefqggg ysnkamyirv sydtkpdsll hlmvrdwqle lpkllisvhg glqnfemqpk
      181 lkqvfgkgli kaamttgawi ftggvstgvi shvgdalkdh ssksrgrvca igiapwgive
      241 nkedlvgkdv trvyqtmsnp lsklsvlnns hthfiladng tlgkygaevm lrrqlekhis
      301 lqkintrlgq gvplvglvve ggpnvvsivl eylreeppvp vvvcdgsgra sdvlsfahky
      361 seeggiinds lrdqlivtiq ktfnynktqs hqlfamimec mkkkelvtvf rmgsegqqdi
      421 emailtallk gtnasapdql slalawnrvd iarsqifvfg prwpplgsla pptdskatek
      481 ekkpptattk aargkgkgkk kgkvkeevee etdprklell nwvnaleqam ldalvldrvd
      541 fvklliengv nmqhfltipr leelyntrlg ppntlhllvr dvkkgnlppd yhislidigl
      601 vleylmggay rcnytrksfr tlynnlfgpk rpkalkllgm eddeppakgk kkkkkkkeee
      661 ldidvddpav srfqypfhel mvwavlmkrq kmavflwqrg eesmakalva cklyksmahe
      721 sseselvddi sqdldnnskd fgqlavelld qsykhdeqia mklltyelkn wsnstclkla
      781 vaakhrdfia htcsqmlltd mwmgrlrmrk npglkvimgi llpptilfld frtyddfsyq
      841 tskenedgke keeenmdana dassrkgdee nehkkqrsvp igtkicefyn apivkfwfyt
      901 isylgylllf nyvilvrmer wpclqewivi syilslalek ireilmsepg klsqkikvwl
      961 qeywnitdlv aismfmigai lrlqkqpymg ygrviycvdi ifwyirvldi fgvnkylgpy
     1021 vmmigkmmid mlyfvvimlv vlmsfgvarq ailhpdeeps wklarnifym pywmiygevf
     1081 adqidrknri htpcgdnqyd eegkrlppci pgawltpaim acyllvanil lvnlliavfn
     1141 ntffevksis nqvwkfqryq limtfhdrpv lpppmiilsh iyiiimrlsr rcrkkregdq
     1201 deqdrglklf lsdeelkrlh efeeqcvreh fqekedeqqs sseerirvtc ervenmsmrl
     1261 eeinerenfm ktslqtvdlr lsqleelsnr mvnalenlag idksdliqtr srassecdat
     1321 fllrrssiss adgyslyryh fngdellhed tsfcmppgaa srkkagsfrg keekdqrtyl
     1381 aperqgslhl ppstgvpasp drgqlasdng kstsepksgp dtgisaesde rqvvpkkeem
     1441 tspslsqtda ihgenksdfq nktqltvett kiegtisypl eesktsryyp detfsacktl
     1501 ksrsfvysgg rkviggansw gaagdptcps tvqqwttewk yevqkimrsq steipsvase
     1561 aalqaehcgh ftdkedencv fktapqisrl svtdrtdkvn llsvkthqtl gfpssrsksl
     1621 hgrprsvkal qgnlhrpgha ssvnnlvvvs gitmedpkvq qektssetec
//
LOCUS       XP_061014846            1664 aa            linear   MAM 02-DEC-2023
DEFINITION  transient receptor potential cation channel subfamily M member 1
            isoform X2 [Dama dama].
ACCESSION   XP_061014846
VERSION     XP_061014846.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158863.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1664
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1664
                     /product="transient receptor potential cation channel
                     subfamily M member 1 isoform X2"
                     /calculated_mol_wt=188373
     Region          135..400
                     /region_name="LSDAT_euk"
                     /note="SLOG in TRPM; pfam18139"
                     /db_xref="CDD:465665"
     Region          <777..1168
                     /region_name="TRPV"
                     /note="Transient Receptor Potential channel, Vanilloid
                     subfamily (TRPV); cl40437"
                     /db_xref="CDD:454755"
     Region          1237..1292
                     /region_name="TRPM_tetra"
                     /note="tetramerization domain of TRPM; pfam16519"
                     /db_xref="CDD:465156"
     CDS             1..1664
                     /gene="TRPM1"
                     /coded_by="XM_061158863.1:2406..7400"
                     /db_xref="GeneID:133067865"
ORIGIN      
        1 mgahvllmwt pplkgwalls eppawpeeva ergqlhplgp vlgqgqkawi ektfckreci
       61 fvipstkdpn rcccgqltnq hipplpsvta skngeenkla evqpekwsvg khtqsyptds
      121 ygilefqggg ysnkamyirv sydtkpdsll hlmvrdwqle lpkllisvhg glqnfemqpk
      181 lkqvfgkgli kaamttgawi ftggvstgvi shvgdalkdh ssksrgrvca igiapwgive
      241 nkedlvgkdv trvyqtmsnp lsklsvlnns hthfiladng tlgkygaevm lrrqlekhis
      301 lqkintrlgq gvplvglvve ggpnvvsivl eylreeppvp vvvcdgsgra sdvlsfahky
      361 seeggiinds lrdqlivtiq ktfnynktqs hqlfamimec mkkkelvtvf rmgsegqqdi
      421 emailtallk gtnasapdql slalawnrvd iarsqifvfg prwpplgsla pptdskatek
      481 ekkpptattk aargkgkgkk kgkvkeevee etdprklell nwvnaleqam ldalvldrvd
      541 fvklliengv nmqhfltipr leelyntrlg ppntlhllvr dvkkgnlppd yhislidigl
      601 vleylmggay rcnytrksfr tlynnlfgpk rpkalkllgm eddeppakgk kkkkkkkeee
      661 ldidvddpav srfqypfhel mvwavlmkrq kmavflwqrg eesmakalva cklyksmahe
      721 sseselvddi sqdldnnskd fgqlavelld qsykhdeqia mklltyelkn wsnstclkla
      781 vaakhrdfia htcsqmlltd mwmgrlrmrk npglkvimgi llpptilfld frtyddfsyq
      841 tskenedgke keeenmdana dassrkgdee nehkkqrsvp igtkicefyn apivkfwfyt
      901 isylgylllf nyvilvrmer wpclqewivi syilslalek ireilmsepg klsqkikvwl
      961 qeywnitdlv aismfmigai lrlqkqpymg ygrviycvdi ifwyirvldi fgvnkylgpy
     1021 vmmigkmmid mlyfvvimlv vlmsfgvarq ailhpdeeps wklarnifym pywmiygevf
     1081 adqidppcgd nqydeegkrl ppcipgawlt paimacyllv anillvnlli avfnntffev
     1141 ksisnqvwkf qryqlimtfh drpvlpppmi ilshiyiiim rlsrrcrkkr egdqdeqdrg
     1201 lklflsdeel krlhefeeqc vrehfqeked eqqssseeri rvtcervenm smrleeiner
     1261 enfmktslqt vdlrlsqlee lsnrmvnale nlagidksdl iqtrsrasse cdatfllrrs
     1321 sissadgysl yryhfngdel lhedtsfcmp pgaasrkkag sfrgkeekdq rtylaperqg
     1381 slhlppstgv paspdrgqla sdngkstsep ksgpdtgisa esderqvvpk keemtspsls
     1441 qtdaihgenk sdfqnktqlt vettkiegti sypleeskts ryypdetfsa cktlksrsfv
     1501 ysggrkvigg answgaagdp tcpstvqqwt tewkyevqki mrsqsteips vaseaalqae
     1561 hcghftdked encvfktapq isrlsvtdrt dkvnllsvkt hqtlgfpssr skslhgrprs
     1621 vkalqgnlhr pghassvnnl vvvsgitmed pkvqqektss etec
//
LOCUS       XP_061014847            1633 aa            linear   MAM 02-DEC-2023
DEFINITION  transient receptor potential cation channel subfamily M member 1
            isoform X3 [Dama dama].
ACCESSION   XP_061014847
VERSION     XP_061014847.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158864.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1633
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1633
                     /product="transient receptor potential cation channel
                     subfamily M member 1 isoform X3"
                     /calculated_mol_wt=185136
     Region          98..363
                     /region_name="LSDAT_euk"
                     /note="SLOG in TRPM; pfam18139"
                     /db_xref="CDD:465665"
     Region          <740..1137
                     /region_name="TRPV"
                     /note="Transient Receptor Potential channel, Vanilloid
                     subfamily (TRPV); cl40437"
                     /db_xref="CDD:454755"
     Region          1206..1261
                     /region_name="TRPM_tetra"
                     /note="tetramerization domain of TRPM; pfam16519"
                     /db_xref="CDD:465156"
     CDS             1..1633
                     /gene="TRPM1"
                     /coded_by="XM_061158864.1:102..5003"
                     /db_xref="GeneID:133067865"
ORIGIN      
        1 mafgvlkgqk awiektfckr ecifvipstk dpnrcccgql tnqhipplps vtaskngeen
       61 klaevqpekw svgkhtqsyp tdsygilefq gggysnkamy irvsydtkpd sllhlmvrdw
      121 qlelpkllis vhgglqnfem qpklkqvfgk glikaamttg awiftggvst gvishvgdal
      181 kdhssksrgr vcaigiapwg ivenkedlvg kdvtrvyqtm snplsklsvl nnshthfila
      241 dngtlgkyga evmlrrqlek hislqkintr lgqgvplvgl vveggpnvvs ivleylreep
      301 pvpvvvcdgs grasdvlsfa hkyseeggii ndslrdqliv tiqktfnynk tqshqlfami
      361 mecmkkkelv tvfrmgsegq qdiemailta llkgtnasap dqlslalawn rvdiarsqif
      421 vfgprwpplg slapptdska tekekkppta ttkaargkgk gkkkgkvkee veeetdprkl
      481 ellnwvnale qamldalvld rvdfvkllie ngvnmqhflt iprleelynt rlgppntlhl
      541 lvrdvkkgnl ppdyhislid iglvleylmg gayrcnytrk sfrtlynnlf gpkrpkalkl
      601 lgmeddeppa kgkkkkkkkk eeeldidvdd pavsrfqypf helmvwavlm krqkmavflw
      661 qrgeesmaka lvacklyksm ahesseselv ddisqdldnn skdfgqlave lldqsykhde
      721 qiamklltye lknwsnstcl klavaakhrd fiahtcsqml ltdmwmgrlr mrknpglkvi
      781 mgillpptil fldfrtyddf syqtskened gkekeeenmd anadassrkg deenehkkqr
      841 svpigtkice fynapivkfw fytisylgyl llfnyvilvr merwpclqew ivisyilsla
      901 lekireilms epgklsqkik vwlqeywnit dlvaismfmi gailrlqkqp ymgygrviyc
      961 vdiifwyirv ldifgvnkyl gpyvmmigkm midmlyfvvi mlvvlmsfgv arqailhpde
     1021 epswklarni fympywmiyg evfadqidrk nrihtpcgdn qydeegkrlp pcipgawltp
     1081 aimacyllva nillvnllia vfnntffevk sisnqvwkfq ryqlimtfhd rpvlpppmii
     1141 lshiyiiimr lsrrcrkkre gdqdeqdrgl klflsdeelk rlhefeeqcv rehfqekede
     1201 qqssseerir vtcervenms mrleeinere nfmktslqtv dlrlsqleel snrmvnalen
     1261 lagidksdli qtrsrassec datfllrrss issadgysly ryhfngdell hedtsfcmpp
     1321 gaasrkkags frgkeekdqr tylaperqgs lhlppstgvp aspdrgqlas dngkstsepk
     1381 sgpdtgisae sderqvvpkk eemtspslsq tdaihgenks dfqnktqltv ettkiegtis
     1441 ypleesktsr yypdetfsac ktlksrsfvy sggrkvigga nswgaagdpt cpstvqqwtt
     1501 ewkyevqkim rsqsteipsv aseaalqaeh cghftdkede ncvfktapqi srlsvtdrtd
     1561 kvnllsvkth qtlgfpssrs kslhgrprsv kalqgnlhrp ghassvnnlv vvsgitmedp
     1621 kvqqektsse tec
//
LOCUS       XP_061014848            1633 aa            linear   MAM 02-DEC-2023
DEFINITION  transient receptor potential cation channel subfamily M member 1
            isoform X3 [Dama dama].
ACCESSION   XP_061014848
VERSION     XP_061014848.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158865.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1633
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1633
                     /product="transient receptor potential cation channel
                     subfamily M member 1 isoform X3"
                     /calculated_mol_wt=185136
     Region          98..363
                     /region_name="LSDAT_euk"
                     /note="SLOG in TRPM; pfam18139"
                     /db_xref="CDD:465665"
     Region          <740..1137
                     /region_name="TRPV"
                     /note="Transient Receptor Potential channel, Vanilloid
                     subfamily (TRPV); cl40437"
                     /db_xref="CDD:454755"
     Region          1206..1261
                     /region_name="TRPM_tetra"
                     /note="tetramerization domain of TRPM; pfam16519"
                     /db_xref="CDD:465156"
     CDS             1..1633
                     /gene="TRPM1"
                     /coded_by="XM_061158865.1:101..5002"
                     /db_xref="GeneID:133067865"
ORIGIN      
        1 mafgvlkgqk awiektfckr ecifvipstk dpnrcccgql tnqhipplps vtaskngeen
       61 klaevqpekw svgkhtqsyp tdsygilefq gggysnkamy irvsydtkpd sllhlmvrdw
      121 qlelpkllis vhgglqnfem qpklkqvfgk glikaamttg awiftggvst gvishvgdal
      181 kdhssksrgr vcaigiapwg ivenkedlvg kdvtrvyqtm snplsklsvl nnshthfila
      241 dngtlgkyga evmlrrqlek hislqkintr lgqgvplvgl vveggpnvvs ivleylreep
      301 pvpvvvcdgs grasdvlsfa hkyseeggii ndslrdqliv tiqktfnynk tqshqlfami
      361 mecmkkkelv tvfrmgsegq qdiemailta llkgtnasap dqlslalawn rvdiarsqif
      421 vfgprwpplg slapptdska tekekkppta ttkaargkgk gkkkgkvkee veeetdprkl
      481 ellnwvnale qamldalvld rvdfvkllie ngvnmqhflt iprleelynt rlgppntlhl
      541 lvrdvkkgnl ppdyhislid iglvleylmg gayrcnytrk sfrtlynnlf gpkrpkalkl
      601 lgmeddeppa kgkkkkkkkk eeeldidvdd pavsrfqypf helmvwavlm krqkmavflw
      661 qrgeesmaka lvacklyksm ahesseselv ddisqdldnn skdfgqlave lldqsykhde
      721 qiamklltye lknwsnstcl klavaakhrd fiahtcsqml ltdmwmgrlr mrknpglkvi
      781 mgillpptil fldfrtyddf syqtskened gkekeeenmd anadassrkg deenehkkqr
      841 svpigtkice fynapivkfw fytisylgyl llfnyvilvr merwpclqew ivisyilsla
      901 lekireilms epgklsqkik vwlqeywnit dlvaismfmi gailrlqkqp ymgygrviyc
      961 vdiifwyirv ldifgvnkyl gpyvmmigkm midmlyfvvi mlvvlmsfgv arqailhpde
     1021 epswklarni fympywmiyg evfadqidrk nrihtpcgdn qydeegkrlp pcipgawltp
     1081 aimacyllva nillvnllia vfnntffevk sisnqvwkfq ryqlimtfhd rpvlpppmii
     1141 lshiyiiimr lsrrcrkkre gdqdeqdrgl klflsdeelk rlhefeeqcv rehfqekede
     1201 qqssseerir vtcervenms mrleeinere nfmktslqtv dlrlsqleel snrmvnalen
     1261 lagidksdli qtrsrassec datfllrrss issadgysly ryhfngdell hedtsfcmpp
     1321 gaasrkkags frgkeekdqr tylaperqgs lhlppstgvp aspdrgqlas dngkstsepk
     1381 sgpdtgisae sderqvvpkk eemtspslsq tdaihgenks dfqnktqltv ettkiegtis
     1441 ypleesktsr yypdetfsac ktlksrsfvy sggrkvigga nswgaagdpt cpstvqqwtt
     1501 ewkyevqkim rsqsteipsv aseaalqaeh cghftdkede ncvfktapqi srlsvtdrtd
     1561 kvnllsvkth qtlgfpssrs kslhgrprsv kalqgnlhrp ghassvnnlv vvsgitmedp
     1621 kvqqektsse tec
//
LOCUS       XP_061014849            1613 aa            linear   MAM 02-DEC-2023
DEFINITION  transient receptor potential cation channel subfamily M member 1
            isoform X4 [Dama dama].
ACCESSION   XP_061014849
VERSION     XP_061014849.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158866.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1613
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1613
                     /product="transient receptor potential cation channel
                     subfamily M member 1 isoform X4"
                     /calculated_mol_wt=182667
     Region          135..400
                     /region_name="LSDAT_euk"
                     /note="SLOG in TRPM; pfam18139"
                     /db_xref="CDD:465665"
     Region          <720..1117
                     /region_name="TRPV"
                     /note="Transient Receptor Potential channel, Vanilloid
                     subfamily (TRPV); cl40437"
                     /db_xref="CDD:454755"
     Region          1186..1241
                     /region_name="TRPM_tetra"
                     /note="tetramerization domain of TRPM; pfam16519"
                     /db_xref="CDD:465156"
     CDS             1..1613
                     /gene="TRPM1"
                     /coded_by="XM_061158866.1:2406..7247"
                     /db_xref="GeneID:133067865"
ORIGIN      
        1 mgahvllmwt pplkgwalls eppawpeeva ergqlhplgp vlgqgqkawi ektfckreci
       61 fvipstkdpn rcccgqltnq hipplpsvta skngeenkla evqpekwsvg khtqsyptds
      121 ygilefqggg ysnkamyirv sydtkpdsll hlmvrdwqle lpkllisvhg glqnfemqpk
      181 lkqvfgkgli kaamttgawi ftggvstgvi shvgdalkdh ssksrgrvca igiapwgive
      241 nkedlvgkdv trvyqtmsnp lsklsvlnns hthfiladng tlgkygaevm lrrqlekhis
      301 lqkintrlgq gvplvglvve ggpnvvsivl eylreeppvp vvvcdgsgra sdvlsfahky
      361 seeggiinds lrdqlivtiq ktfnynktqs hqlfamimec mkkkelvtvf rmgsegqqdi
      421 emailtallk gtnasapdql slalawnrvd iarsqifvfg prwpplgsla pptdskatek
      481 ekkpptattk aargkgkgkk kgkvkeevee etdprklell nwvnaleqam ldalvldrvd
      541 fvklliengv nmqhfltipr leelyntrlg ppntlhllvr dvkkddeppa kgkkkkkkkk
      601 eeeldidvdd pavsrfqypf helmvwavlm krqkmavflw qrgeesmaka lvacklyksm
      661 ahesseselv ddisqdldnn skdfgqlave lldqsykhde qiamklltye lknwsnstcl
      721 klavaakhrd fiahtcsqml ltdmwmgrlr mrknpglkvi mgillpptil fldfrtyddf
      781 syqtskened gkekeeenmd anadassrkg deenehkkqr svpigtkice fynapivkfw
      841 fytisylgyl llfnyvilvr merwpclqew ivisyilsla lekireilms epgklsqkik
      901 vwlqeywnit dlvaismfmi gailrlqkqp ymgygrviyc vdiifwyirv ldifgvnkyl
      961 gpyvmmigkm midmlyfvvi mlvvlmsfgv arqailhpde epswklarni fympywmiyg
     1021 evfadqidrk nrihtpcgdn qydeegkrlp pcipgawltp aimacyllva nillvnllia
     1081 vfnntffevk sisnqvwkfq ryqlimtfhd rpvlpppmii lshiyiiimr lsrrcrkkre
     1141 gdqdeqdrgl klflsdeelk rlhefeeqcv rehfqekede qqssseerir vtcervenms
     1201 mrleeinere nfmktslqtv dlrlsqleel snrmvnalen lagidksdli qtrsrassec
     1261 datfllrrss issadgysly ryhfngdell hedtsfcmpp gaasrkkags frgkeekdqr
     1321 tylaperqgs lhlppstgvp aspdrgqlas dngkstsepk sgpdtgisae sderqvvpkk
     1381 eemtspslsq tdaihgenks dfqnktqltv ettkiegtis ypleesktsr yypdetfsac
     1441 ktlksrsfvy sggrkvigga nswgaagdpt cpstvqqwtt ewkyevqkim rsqsteipsv
     1501 aseaalqaeh cghftdkede ncvfktapqi srlsvtdrtd kvnllsvkth qtlgfpssrs
     1561 kslhgrprsv kalqgnlhrp ghassvnnlv vvsgitmedp kvqqektsse tec
//
LOCUS       XP_061014850            1596 aa            linear   MAM 02-DEC-2023
DEFINITION  transient receptor potential cation channel subfamily M member 1
            isoform X5 [Dama dama].
ACCESSION   XP_061014850
VERSION     XP_061014850.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158867.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1596
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1596
                     /product="transient receptor potential cation channel
                     subfamily M member 1 isoform X5"
                     /calculated_mol_wt=180728
     Region          135..400
                     /region_name="LSDAT_euk"
                     /note="SLOG in TRPM; pfam18139"
                     /db_xref="CDD:465665"
     Region          <703..1100
                     /region_name="TRPV"
                     /note="Transient Receptor Potential channel, Vanilloid
                     subfamily (TRPV); cl40437"
                     /db_xref="CDD:454755"
     Region          1169..1224
                     /region_name="TRPM_tetra"
                     /note="tetramerization domain of TRPM; pfam16519"
                     /db_xref="CDD:465156"
     CDS             1..1596
                     /gene="TRPM1"
                     /coded_by="XM_061158867.1:2406..7196"
                     /db_xref="GeneID:133067865"
ORIGIN      
        1 mgahvllmwt pplkgwalls eppawpeeva ergqlhplgp vlgqgqkawi ektfckreci
       61 fvipstkdpn rcccgqltnq hipplpsvta skngeenkla evqpekwsvg khtqsyptds
      121 ygilefqggg ysnkamyirv sydtkpdsll hlmvrdwqle lpkllisvhg glqnfemqpk
      181 lkqvfgkgli kaamttgawi ftggvstgvi shvgdalkdh ssksrgrvca igiapwgive
      241 nkedlvgkdv trvyqtmsnp lsklsvlnns hthfiladng tlgkygaevm lrrqlekhis
      301 lqkintrlgq gvplvglvve ggpnvvsivl eylreeppvp vvvcdgsgra sdvlsfahky
      361 seeggiinds lrdqlivtiq ktfnynktqs hqlfamimec mkkkelvtvf rmgsegqqdi
      421 emailtallk gtnasapdql slalawnrvd iarsqifvfg prwpplgsla pptdskatek
      481 ekkpptattk aargkgkgkk kgkvkeevee etdprklell nwvnaleqam ldalvldrvd
      541 fvklliengv nmqhfltipr leelyntdde ppakgkkkkk kkkeeeldid vddpavsrfq
      601 ypfhelmvwa vlmkrqkmav flwqrgeesm akalvackly ksmahesses elvddisqdl
      661 dnnskdfgql avelldqsyk hdeqiamkll tyelknwsns tclklavaak hrdfiahtcs
      721 qmlltdmwmg rlrmrknpgl kvimgillpp tilfldfrty ddfsyqtske nedgkekeee
      781 nmdanadass rkgdeenehk kqrsvpigtk icefynapiv kfwfytisyl gylllfnyvi
      841 lvrmerwpcl qewivisyil slalekirei lmsepgklsq kikvwlqeyw nitdlvaism
      901 fmigailrlq kqpymgygrv iycvdiifwy irvldifgvn kylgpyvmmi gkmmidmlyf
      961 vvimlvvlms fgvarqailh pdeepswkla rnifympywm iygevfadqi drknrihtpc
     1021 gdnqydeegk rlppcipgaw ltpaimacyl lvanillvnl liavfnntff evksisnqvw
     1081 kfqryqlimt fhdrpvlppp miilshiyii imrlsrrcrk kregdqdeqd rglklflsde
     1141 elkrlhefee qcvrehfqek edeqqsssee rirvtcerve nmsmrleein erenfmktsl
     1201 qtvdlrlsql eelsnrmvna lenlagidks dliqtrsras secdatfllr rssissadgy
     1261 slyryhfngd ellhedtsfc mppgaasrkk agsfrgkeek dqrtylaper qgslhlppst
     1321 gvpaspdrgq lasdngksts epksgpdtgi saesderqvv pkkeemtsps lsqtdaihge
     1381 nksdfqnktq ltvettkieg tisypleesk tsryypdetf sacktlksrs fvysggrkvi
     1441 gganswgaag dptcpstvqq wttewkyevq kimrsqstei psvaseaalq aehcghftdk
     1501 edencvfkta pqisrlsvtd rtdkvnllsv kthqtlgfps srskslhgrp rsvkalqgnl
     1561 hrpghassvn nlvvvsgitm edpkvqqekt ssetec
//
LOCUS       XP_061014851            1022 aa            linear   MAM 02-DEC-2023
DEFINITION  fanconi-associated nuclease 1 isoform X1 [Dama dama].
ACCESSION   XP_061014851
VERSION     XP_061014851.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158868.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1022
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1022
                     /product="fanconi-associated nuclease 1 isoform X1"
                     /calculated_mol_wt=113613
     Region          40..61
                     /region_name="ZnF_Rad18"
                     /note="Rad18-like CCHC zinc finger; smart00734"
                     /db_xref="CDD:128973"
     Region          379..1021
                     /region_name="FAN1-like"
                     /note="repair nuclease FAN1; cd22326"
                     /db_xref="CDD:411730"
     Site            order(379..380,426,430..431,439,442,479..481,498..500,579,
                     582..584,587,626,678,681,684..685,687,712,716,719,
                     723..724,748,755,758,800..801,957,985,987,991)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:411730"
     CDS             1..1022
                     /gene="FAN1"
                     /coded_by="XM_061158868.1:435..3503"
                     /db_xref="GeneID:133067866"
ORIGIN      
        1 mmsvgksskk rprtslsssk tkqnesnsii sffnnappak lacpicskmv prydlnrhld
       61 emcadhdnmt pggpghvgls snvptidltn ialeditpek sspstinltp cqndsakmgk
      121 kqqtspyfks kgdsvcrnqe elrhhnvkvi slgslsskls rryikakrsl nqnegftnqs
      181 lqrssctrvk slvdqhleve gqdpllenss qkeniftgds qeelstpaht vestmveeae
      241 gqtaaqeceq stltpactgd vpvfssdlil ghrksapkdh lakqesvkgv dgevtekcet
      301 ghyeevkmtv vsevtnqgsh reakppsstv gasiqtnsqm lppesdssle dkithqmple
      361 krsscdvswv tspevpdhpy ylrsflvvlk avfeneedrm lfdehekglv tkfhqlsang
      421 qklyvrlfqr kfgwikvnkl ayeeisadlt pvvgelthag flqteselqe lpevlellsa
      481 pelkalaktf hlasahgqkq qlvdaflrla kqpsvctwgr nqpgigavil krakdvvgrs
      541 lrvcrgprav fsralllfsl sdmvededaa cggqgqlstv llvnlgrlef prytinrktp
      601 ifqdrddlir yavaahmlnd istamasgaw eearelarca kqnwdglkdh pslryhenlp
      661 lflrcftvgw vytrilsrnv eilqrlhlyk eaveelenll sqdvycpdsr grwwdrlaln
      721 lhqhlkrlep avqciaagla dphvrtghrl alyqraarlr aspsgqkymh llrqlpevtv
      781 edvrhvtvtg rlcpqrgsgk svfvleagga tpatllcsve elalahyrhc gfdqgihgeg
      841 stfstlfgll lwdiifmdgv pdafrnayqa apldlctdsf fesrapamea rlqqihsape
      901 eslrawvaav wqaqegrvss lvswdrfssl qqaqdlvscl ggsilsgvcr rlavdfrhcr
      961 gglpdlvvws sqshhvklve vkgphdrlsq kqmiwldelr rlgadvevch vaavgarsrg
     1021 pd
//
LOCUS       XP_061014852            1022 aa            linear   MAM 02-DEC-2023
DEFINITION  fanconi-associated nuclease 1 isoform X1 [Dama dama].
ACCESSION   XP_061014852
VERSION     XP_061014852.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158869.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1022
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1022
                     /product="fanconi-associated nuclease 1 isoform X1"
                     /calculated_mol_wt=113613
     Region          40..61
                     /region_name="ZnF_Rad18"
                     /note="Rad18-like CCHC zinc finger; smart00734"
                     /db_xref="CDD:128973"
     Region          379..1021
                     /region_name="FAN1-like"
                     /note="repair nuclease FAN1; cd22326"
                     /db_xref="CDD:411730"
     Site            order(379..380,426,430..431,439,442,479..481,498..500,579,
                     582..584,587,626,678,681,684..685,687,712,716,719,
                     723..724,748,755,758,800..801,957,985,987,991)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:411730"
     CDS             1..1022
                     /gene="FAN1"
                     /coded_by="XM_061158869.1:442..3510"
                     /db_xref="GeneID:133067866"
ORIGIN      
        1 mmsvgksskk rprtslsssk tkqnesnsii sffnnappak lacpicskmv prydlnrhld
       61 emcadhdnmt pggpghvgls snvptidltn ialeditpek sspstinltp cqndsakmgk
      121 kqqtspyfks kgdsvcrnqe elrhhnvkvi slgslsskls rryikakrsl nqnegftnqs
      181 lqrssctrvk slvdqhleve gqdpllenss qkeniftgds qeelstpaht vestmveeae
      241 gqtaaqeceq stltpactgd vpvfssdlil ghrksapkdh lakqesvkgv dgevtekcet
      301 ghyeevkmtv vsevtnqgsh reakppsstv gasiqtnsqm lppesdssle dkithqmple
      361 krsscdvswv tspevpdhpy ylrsflvvlk avfeneedrm lfdehekglv tkfhqlsang
      421 qklyvrlfqr kfgwikvnkl ayeeisadlt pvvgelthag flqteselqe lpevlellsa
      481 pelkalaktf hlasahgqkq qlvdaflrla kqpsvctwgr nqpgigavil krakdvvgrs
      541 lrvcrgprav fsralllfsl sdmvededaa cggqgqlstv llvnlgrlef prytinrktp
      601 ifqdrddlir yavaahmlnd istamasgaw eearelarca kqnwdglkdh pslryhenlp
      661 lflrcftvgw vytrilsrnv eilqrlhlyk eaveelenll sqdvycpdsr grwwdrlaln
      721 lhqhlkrlep avqciaagla dphvrtghrl alyqraarlr aspsgqkymh llrqlpevtv
      781 edvrhvtvtg rlcpqrgsgk svfvleagga tpatllcsve elalahyrhc gfdqgihgeg
      841 stfstlfgll lwdiifmdgv pdafrnayqa apldlctdsf fesrapamea rlqqihsape
      901 eslrawvaav wqaqegrvss lvswdrfssl qqaqdlvscl ggsilsgvcr rlavdfrhcr
      961 gglpdlvvws sqshhvklve vkgphdrlsq kqmiwldelr rlgadvevch vaavgarsrg
     1021 pd
//
LOCUS       XP_061014853             816 aa            linear   MAM 02-DEC-2023
DEFINITION  fanconi-associated nuclease 1 isoform X2 [Dama dama].
ACCESSION   XP_061014853
VERSION     XP_061014853.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158870.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..816
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..816
                     /product="fanconi-associated nuclease 1 isoform X2"
                     /calculated_mol_wt=91091
     Region          40..61
                     /region_name="ZnF_Rad18"
                     /note="Rad18-like CCHC zinc finger; smart00734"
                     /db_xref="CDD:128973"
     Region          379..>787
                     /region_name="FAN1-like"
                     /note="repair nuclease FAN1; cd22326"
                     /db_xref="CDD:411730"
     Site            order(379..380,426,430..431,439,442,479..481,498..500,579,
                     582..584,587,626,678,681,684..685,687,712,716,719,
                     723..724,748,755,758)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:411730"
     CDS             1..816
                     /gene="FAN1"
                     /coded_by="XM_061158870.1:435..2885"
                     /db_xref="GeneID:133067866"
ORIGIN      
        1 mmsvgksskk rprtslsssk tkqnesnsii sffnnappak lacpicskmv prydlnrhld
       61 emcadhdnmt pggpghvgls snvptidltn ialeditpek sspstinltp cqndsakmgk
      121 kqqtspyfks kgdsvcrnqe elrhhnvkvi slgslsskls rryikakrsl nqnegftnqs
      181 lqrssctrvk slvdqhleve gqdpllenss qkeniftgds qeelstpaht vestmveeae
      241 gqtaaqeceq stltpactgd vpvfssdlil ghrksapkdh lakqesvkgv dgevtekcet
      301 ghyeevkmtv vsevtnqgsh reakppsstv gasiqtnsqm lppesdssle dkithqmple
      361 krsscdvswv tspevpdhpy ylrsflvvlk avfeneedrm lfdehekglv tkfhqlsang
      421 qklyvrlfqr kfgwikvnkl ayeeisadlt pvvgelthag flqteselqe lpevlellsa
      481 pelkalaktf hlasahgqkq qlvdaflrla kqpsvctwgr nqpgigavil krakdvvgrs
      541 lrvcrgprav fsralllfsl sdmvededaa cggqgqlstv llvnlgrlef prytinrktp
      601 ifqdrddlir yavaahmlnd istamasgaw eearelarca kqnwdglkdh pslryhenlp
      661 lflrcftvgw vytrilsrnv eilqrlhlyk eaveelenll sqdvycpdsr grwwdrlaln
      721 lhqhlkrlep avqciaagla dphvrtghrl alyqraarlr aspsgqkymh llrqlpevtv
      781 edvrhkalwf avdsdpallr pqpgievskr pgqqgl
//
LOCUS       XP_061014854             534 aa            linear   MAM 02-DEC-2023
DEFINITION  fanconi-associated nuclease 1 isoform X3 [Dama dama].
ACCESSION   XP_061014854
VERSION     XP_061014854.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158871.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..534
                     /product="fanconi-associated nuclease 1 isoform X3"
                     /calculated_mol_wt=58955
     Region          40..61
                     /region_name="ZnF_Rad18"
                     /note="Rad18-like CCHC zinc finger; smart00734"
                     /db_xref="CDD:128973"
     Region          379..>534
                     /region_name="PDDEXK_nuclease-like"
                     /note="PDDEXK family nucleases; cl40440"
                     /db_xref="CDD:477358"
     CDS             1..534
                     /gene="FAN1"
                     /coded_by="XM_061158871.1:435..2039"
                     /db_xref="GeneID:133067866"
ORIGIN      
        1 mmsvgksskk rprtslsssk tkqnesnsii sffnnappak lacpicskmv prydlnrhld
       61 emcadhdnmt pggpghvgls snvptidltn ialeditpek sspstinltp cqndsakmgk
      121 kqqtspyfks kgdsvcrnqe elrhhnvkvi slgslsskls rryikakrsl nqnegftnqs
      181 lqrssctrvk slvdqhleve gqdpllenss qkeniftgds qeelstpaht vestmveeae
      241 gqtaaqeceq stltpactgd vpvfssdlil ghrksapkdh lakqesvkgv dgevtekcet
      301 ghyeevkmtv vsevtnqgsh reakppsstv gasiqtnsqm lppesdssle dkithqmple
      361 krsscdvswv tspevpdhpy ylrsflvvlk avfeneedrm lfdehekglv tkfhqlsang
      421 qklyvrlfqr kfgwikvnkl ayeeisadlt pvvgelthag flqteselqe lpevlellsa
      481 pelkalaktf hlasahgqkq qlvdaflrla kqpsvctwgr nqpgigavil ksfr
//
LOCUS       XP_061014855             764 aa            linear   MAM 02-DEC-2023
DEFINITION  myotubularin-related protein 10 [Dama dama].
ACCESSION   XP_061014855
VERSION     XP_061014855.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158872.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..764
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..764
                     /product="myotubularin-related protein 10"
                     /calculated_mol_wt=86942
     Region          21..194
                     /region_name="PH-GRAM_MTMR10"
                     /note="Myotubularian (MTM) related 10 protein (MTMR10)
                     Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase
                     activators and Myotubularins (PH-GRAM) domain; cd13346"
                     /db_xref="CDD:270154"
     Region          268..461
                     /region_name="PTP-MTMR10"
                     /note="protein tyrosine phosphatase-like pseudophosphatase
                     domain of myotubularin related phosphoinositide
                     phosphatase 10; cd14593"
                     /db_xref="CDD:350441"
     Region          563..694
                     /region_name="3-PAP"
                     /note="Myotubularin-associated protein; pfam12578"
                     /db_xref="CDD:463634"
     CDS             1..764
                     /gene="MTMR10"
                     /coded_by="XM_061158872.1:101..2395"
                     /db_xref="GeneID:133067867"
ORIGIN      
        1 mfslkpprpt frsyllpppq tddkinsepk ikklepvllp geivvnevnf vrkciasdts
       61 qydlwgklic snfkisfitd dpmplqkfhy rnlllgehdv pltcieqivt lndhkrkqkv
      121 lgpnqklkfn pteliiyckd frivrfrfde sgpesakkvc laiahysqpt dlqllfafey
      181 vgkkyhnsas kangaplgag ggssqktplf etysdwdrev krtsasgwrv csinegymis
      241 tclpeyfvvp ssladqdlkv fshsfvgrrm pfwcwshsng salvrtalir dmlqqrkieq
      301 riynaitksh pqrsdiyksd ldktlpniqd iqvafvklkq lcvnepfeet eekwlsslen
      361 trwleyvraf lkhaaelvyv leskrlsvvl qeeegrdlsc iiaslvqvml dpyfrtitgf
      421 qsliqkewvm agypfldrcn hlkrsekeap vfllfldttw qlleqcpaaf efsetylavl
      481 hdstrvalfg tflfnsphqr vqqstefais kniqlgdekg lkfpsvwdws lqftpkdrtl
      541 fhnpfyigks tpcvqngsvk sfkrtkksys stlrgmpasl kngiiseqel rprrnslilq
      601 vkpapleprd sqdwgveqff qerasrpadl hgtilprlsg ahiklwklcy frwvpeaqiq
      661 hggfitafhk lslladevdv lsralrqprg gptpapgpeq apsrlyfhag gphdaagtpd
      721 flsssfpfsp vgnlcrrsis gtplskflsg akiwlstetl aned
//
LOCUS       XP_061014856             292 aa            linear   MAM 02-DEC-2023
DEFINITION  Krueppel-like factor 13 [Dama dama].
ACCESSION   XP_061014856
VERSION     XP_061014856.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158873.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..292
                     /product="Krueppel-like factor 13"
                     /calculated_mol_wt=31243
     Region          7..172
                     /region_name="KLF13_N"
                     /note="N-terminal domain of Kruppel-like factor 13;
                     cd21571"
                     /db_xref="CDD:409236"
     Region          <166..256
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          173..195
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(180,182,184,186..187,190..191,194,210,212,216..217,
                     220..221,224,238,240,242,244..245,248..249,252)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          203..225
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(203,208,221,225)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          233..253
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..292
                     /gene="KLF13"
                     /coded_by="XM_061158873.1:374..1252"
                     /db_xref="GeneID:133067870"
ORIGIN      
        1 maaaayvdhf aaeclvsmsn ravvhgpreg pepgpegaaa vaatlprvee rrdgkdsasl
       61 fvvariladl nqqapapapa erregaaark artpcrlppa pppapepasp gasgaaaapl
      121 spawsepepe peaglepere pgaagsgepg lrqrgrrgrs rtdlespqrk hkchyagcek
      181 vygksshlka hlrthtgerp facswqdcnk kfarsdelar hyrthtgekk fscpicdkrf
      241 mrsdhltkha rrhanfhpgm lqrrgggsrt gslsdysrsd assptispas sp
//
LOCUS       XP_061014857             285 aa            linear   MAM 02-DEC-2023
DEFINITION  non-structural maintenance of chromosomes element 3 homolog [Dama
            dama].
ACCESSION   XP_061014857
VERSION     XP_061014857.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158874.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..285
                     /product="non-structural maintenance of chromosomes
                     element 3 homolog"
                     /calculated_mol_wt=31899
     Region          63..232
                     /region_name="MAGE"
                     /note="MAGE homology domain; pfam01454"
                     /db_xref="CDD:426270"
     CDS             1..285
                     /gene="NSMCE3"
                     /coded_by="XM_061158874.1:97..954"
                     /db_xref="GeneID:133067873"
ORIGIN      
        1 msqkpksrgr pssqverepd gggeeapsts rgpggaasqr raqaspapgp rsqkqlelkv
       61 aelvqfllik dqkkipirrt dilrhvvgdy kdvlpellrr aaerleyvfg yrlveleprs
      121 ntyilvntle pveedaevrg dqgtpttgll mivlglifmk gnsiketevw dflrrlgvhp
      181 akkhlifgdp kklitedfvr qryldyrrip htdpvdyelq wgprtnlets kmkvlkfvak
      241 vhnqdpkdwp aqycealade eararpqpag pspataptpt aapvs
//
LOCUS       XP_061014858             200 aa            linear   MAM 02-DEC-2023
DEFINITION  mediator of RNA polymerase II transcription subunit 29-like [Dama
            dama].
ACCESSION   XP_061014858
VERSION     XP_061014858.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158875.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..200
                     /product="mediator of RNA polymerase II transcription
                     subunit 29-like"
                     /calculated_mol_wt=20912
     Region          53..186
                     /region_name="Med29"
                     /note="Mediator complex subunit 29; pfam11568"
                     /db_xref="CDD:431937"
     CDS             1..200
                     /gene="LOC133067874"
                     /coded_by="XM_061158875.1:26..628"
                     /db_xref="GeneID:133067874"
ORIGIN      
        1 maasqqqasa tssaasvsgp gsaggsgsqq qpqppaqlvg paqsgllqqq qqdfdpvqry
       61 kmlipqlkes lqtlmkvaaq nliqntnidn gqkssdgpiq cfdkcleefy alcdqlelcl
      121 rlaheclsqs cnsakhsptl vptatkpdav qpdslpypqy lavikaqiac akdihtalld
      181 cankvtgktp apptgpggtl
//
LOCUS       XP_061014859            1763 aa            linear   MAM 02-DEC-2023
DEFINITION  tight junction protein ZO-1 isoform X1 [Dama dama].
ACCESSION   XP_061014859
VERSION     XP_061014859.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158876.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1763
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1763
                     /product="tight junction protein ZO-1 isoform X1"
                     /calculated_mol_wt=195334
     Region          22..108
                     /region_name="PDZ1_ZO1-like"
                     /note="PDZ domain 1 of Zonula Occludens-1 (ZO-1), homologs
                     ZO-2 and ZO-3, and related domains; cd06727"
                     /db_xref="CDD:467209"
     Site            order(33..39,57,60,88,92,95..96)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467209"
     Region          186..263
                     /region_name="PDZ2_ZO1-like_ds"
                     /note="PDZ domain 2 of Zonula Occludens-1 (ZO-1), ZO-2 and
                     ZO-3, and related domains; form domain-swapping dimers;
                     cd06728"
                     /db_xref="CDD:467210"
     Site            order(186..191,196..212,215..217,220,222..223,230,
                     238..239,241..242,254..260)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467210"
     Site            order(197..203,209,212,242,246,249..250)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467210"
     Region          422..501
                     /region_name="PDZ3_ZO1-like_domain"
                     /note="PDZ domain 3 of Zonula Occludens-1 (ZO-1), homologs
                     ZO-2 and ZO-3, and related domains; cd06729"
                     /db_xref="CDD:467211"
     Site            order(432..438,448,451,480,484,487..488)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467211"
     Region          517..581
                     /region_name="SH3_ZO-1"
                     /note="Src homology 3 domain of the Tight junction
                     protein, Zonula occludens protein 1; cd12026"
                     /db_xref="CDD:212959"
     Site            order(517..519,547..549,554,557,576)
                     /site_type="other"
                     /note="PDZ interface"
                     /db_xref="CDD:212959"
     Site            order(519..525,538..539,542,557,565..566,574..576,
                     580..581)
                     /site_type="other"
                     /note="GuK interface [polypeptide binding]"
                     /db_xref="CDD:212959"
     Site            order(525,527,530,534,555..556,575,577..578)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212959"
     Region          615..794
                     /region_name="GuKc"
                     /note="Guanylate kinase homologues; smart00072"
                     /db_xref="CDD:214504"
     Region          <868..1234
                     /region_name="PHA03377"
                     /note="EBNA-3C; Provisional"
                     /db_xref="CDD:177614"
     Region          <1103..1386
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1631..1729
                     /region_name="ZU5"
                     /note="ZU5 domain; pfam00791"
                     /db_xref="CDD:459941"
     CDS             1..1763
                     /gene="TJP1"
                     /coded_by="XM_061158876.1:129..5420"
                     /db_xref="GeneID:133067875"
ORIGIN      
        1 msaraaaakn ttmeetaiwe qhtvtlhrap gfgfgiaisg grdnphfqsg etsivisdvl
       61 kggpaegqlq endrvamvng vsmdnvehaf avqqlrksgk nakitirrkk kvqipvsrpd
      121 pepvseneed sydeeahdpr sgrgalanrr sekswgrdrs asrerslspr sdrrsvassq
      181 parptkvtlv ksrkneeygl rlashifvke isqdslaard gniqegdvvl kingtvtenm
      241 sltdaktlie rskgklkmvv qrderatlln vpdlsdsihs adaserddis eiqslasdhs
      301 grshdrpprh srsrspdqrs epsdhsrhsp qqpssgslrs reeeriskpg avstpvkhad
      361 dhtpktveev vvernekqap nlpepkpvya qvgqpdvdlp vspsdgvlpn sthedgilrp
      421 smklvkfrkg dsvglrlagg ndvgifvagv ledspaakeg leegdqilrv nnvdftniir
      481 eeavlflldl pkgeevtila qkkkdvyrri vesdvgdsfy irthfeyeke spyglsfnkg
      541 evfrvvdtly ngklgswlai rigknhkeve rgiipnknra eqlasvqytl pktaggdrad
      601 fwrfrglrss krnlrksred lsaqpvqtkf payervvlre agflrpvtif gpiadvarek
      661 lareepdiyq iakseprdag tdqrssgiir lhtikqiidq dkhalldvtp navdrlnyaq
      721 wypivvflnp dskqgvktmr mrlcpesrks arklyershk lrknnhhlft ttinlnsmnd
      781 gwygalkeai qqqqnqlvwv segkadgats ddldlhddrl sylsapgsey smystdsrht
      841 sdyedtdteg gaytdqelde tlndevgtpp esaitrssep vredssgmhp dhqayppysp
      901 qaqpqpghri dspgfktasq qkaeasspgp ylspetnpaa sasavnphvd ltnvrleeps
      961 pappssdsph adslrasgte athvqlrgpe pslsshvgpa kvyrkdpype etmrqnhvlk
     1021 qpaaahpgqr pdkeqglsye pqppyterqa greleqpayr ydassypeqf arnydhrlry
     1081 ddrlltyeeq wpyyddkqpy qtrpldgqpp aeptergyfp rfeepvplsy egrahydplp
     1141 rtstlrheep papapgydvh gryrpdaqpy stagpkappe pkpyldqypr syepvpaqgf
     1201 psragpghye plhstvltpp lgpssqhkpe lpptgtkplp pppapaeeee dpamkpqsvl
     1261 trvkmfenkr sasmenrkde shstsfkppe vmskpagapv pgpkapapsq lsehdraahr
     1321 ipepqrphmk ppedivranh ydpeedeeyy rkqlsyfdrr sfeakppahv pashlseptr
     1381 pahpqsqpqf agysskgkaa eaeavdrsfg ekrydplqat ppppplptqy sqgahpspnt
     1441 alglqahtkg phgegnamsl dfqnslvskp dpppsqnkpa ayrpapreda vqsafypqks
     1501 fpekapangv eqtqktvtpa ynrftpkpyt ssarpferkf espkfnhnll pnetthkpdl
     1561 sskapaspkt llksaqppef dsgvetfsvh tdnklkyqvn svstgpravp vspsaveede
     1621 dedghtvvat argvfnsngg vlssietgvs iiipqgaipe gveqeiyfkv crdnsilppl
     1681 dkekgetlls plvmcgphgl kflkpvelrl phcasmtpdg wsfalkssds ssgdpktwqn
     1741 kclpgdpnyl vgancvsvli dhf
//
LOCUS       XP_061014860            1750 aa            linear   MAM 02-DEC-2023
DEFINITION  tight junction protein ZO-1 isoform X2 [Dama dama].
ACCESSION   XP_061014860
VERSION     XP_061014860.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158877.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1750
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1750
                     /product="tight junction protein ZO-1 isoform X2"
                     /calculated_mol_wt=193993
     Region          22..108
                     /region_name="PDZ1_ZO1-like"
                     /note="PDZ domain 1 of Zonula Occludens-1 (ZO-1), homologs
                     ZO-2 and ZO-3, and related domains; cd06727"
                     /db_xref="CDD:467209"
     Site            order(33..39,57,60,88,92,95..96)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467209"
     Region          186..263
                     /region_name="PDZ2_ZO1-like_ds"
                     /note="PDZ domain 2 of Zonula Occludens-1 (ZO-1), ZO-2 and
                     ZO-3, and related domains; form domain-swapping dimers;
                     cd06728"
                     /db_xref="CDD:467210"
     Site            order(186..191,196..212,215..217,220,222..223,230,
                     238..239,241..242,254..260)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467210"
     Site            order(197..203,209,212,242,246,249..250)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467210"
     Region          422..501
                     /region_name="PDZ3_ZO1-like_domain"
                     /note="PDZ domain 3 of Zonula Occludens-1 (ZO-1), homologs
                     ZO-2 and ZO-3, and related domains; cd06729"
                     /db_xref="CDD:467211"
     Site            order(432..438,448,451,480,484,487..488)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467211"
     Region          517..581
                     /region_name="SH3_ZO-1"
                     /note="Src homology 3 domain of the Tight junction
                     protein, Zonula occludens protein 1; cd12026"
                     /db_xref="CDD:212959"
     Site            order(517..519,547..549,554,557,576)
                     /site_type="other"
                     /note="PDZ interface"
                     /db_xref="CDD:212959"
     Site            order(519..525,538..539,542,557,565..566,574..576,
                     580..581)
                     /site_type="other"
                     /note="GuK interface [polypeptide binding]"
                     /db_xref="CDD:212959"
     Site            order(525,527,530,534,555..556,575,577..578)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212959"
     Region          615..794
                     /region_name="GuKc"
                     /note="Guanylate kinase homologues; smart00072"
                     /db_xref="CDD:214504"
     Region          <868..1234
                     /region_name="PHA03377"
                     /note="EBNA-3C; Provisional"
                     /db_xref="CDD:177614"
     Region          <1103..1386
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1631..1719
                     /region_name="ZU5"
                     /note="ZU5 domain; pfam00791"
                     /db_xref="CDD:459941"
     CDS             1..1750
                     /gene="TJP1"
                     /coded_by="XM_061158877.1:129..5381"
                     /db_xref="GeneID:133067875"
ORIGIN      
        1 msaraaaakn ttmeetaiwe qhtvtlhrap gfgfgiaisg grdnphfqsg etsivisdvl
       61 kggpaegqlq endrvamvng vsmdnvehaf avqqlrksgk nakitirrkk kvqipvsrpd
      121 pepvseneed sydeeahdpr sgrgalanrr sekswgrdrs asrerslspr sdrrsvassq
      181 parptkvtlv ksrkneeygl rlashifvke isqdslaard gniqegdvvl kingtvtenm
      241 sltdaktlie rskgklkmvv qrderatlln vpdlsdsihs adaserddis eiqslasdhs
      301 grshdrpprh srsrspdqrs epsdhsrhsp qqpssgslrs reeeriskpg avstpvkhad
      361 dhtpktveev vvernekqap nlpepkpvya qvgqpdvdlp vspsdgvlpn sthedgilrp
      421 smklvkfrkg dsvglrlagg ndvgifvagv ledspaakeg leegdqilrv nnvdftniir
      481 eeavlflldl pkgeevtila qkkkdvyrri vesdvgdsfy irthfeyeke spyglsfnkg
      541 evfrvvdtly ngklgswlai rigknhkeve rgiipnknra eqlasvqytl pktaggdrad
      601 fwrfrglrss krnlrksred lsaqpvqtkf payervvlre agflrpvtif gpiadvarek
      661 lareepdiyq iakseprdag tdqrssgiir lhtikqiidq dkhalldvtp navdrlnyaq
      721 wypivvflnp dskqgvktmr mrlcpesrks arklyershk lrknnhhlft ttinlnsmnd
      781 gwygalkeai qqqqnqlvwv segkadgats ddldlhddrl sylsapgsey smystdsrht
      841 sdyedtdteg gaytdqelde tlndevgtpp esaitrssep vredssgmhp dhqayppysp
      901 qaqpqpghri dspgfktasq qkaeasspgp ylspetnpaa sasavnphvd ltnvrleeps
      961 pappssdsph adslrasgte athvqlrgpe pslsshvgpa kvyrkdpype etmrqnhvlk
     1021 qpaaahpgqr pdkeqglsye pqppyterqa greleqpayr ydassypeqf arnydhrlry
     1081 ddrlltyeeq wpyyddkqpy qtrpldgqpp aeptergyfp rfeepvplsy egrahydplp
     1141 rtstlrheep papapgydvh gryrpdaqpy stagpkappe pkpyldqypr syepvpaqgf
     1201 psragpghye plhstvltpp lgpssqhkpe lpptgtkplp pppapaeeee dpamkpqsvl
     1261 trvkmfenkr sasmenrkde shstsfkppe vmskpagapv pgpkapapsq lsehdraahr
     1321 ipepqrphmk ppedivranh ydpeedeeyy rkqlsyfdrr sfeakppahv pashlseptr
     1381 pahpqsqpqf agysskgkaa eaeavdrsfg ekrydplqat ppppplptqy sqgahpspnt
     1441 alglqahtkg phgegnamsl dfqnslvskp dpppsqnkpa ayrpapreda vqsafypqks
     1501 fpekapangv eqtqktvtpa ynrftpkpyt ssarpferkf espkfnhnll pnetthkpdl
     1561 sskapaspkt llksaqppef dsgvetfsvh tdnklkyqvn svstgpravp vspsaveede
     1621 dedghtvvat argvfnsngg vlssietgvs iiipqgaipe gveqeiyfkv crdnsilppl
     1681 dkekgetlls plvmcgphgl kflkpvelrl phcasmtpdg dpktwqnkcl pgdpnylvga
     1741 ncvsvlidhf
//
LOCUS       XP_061014861            1743 aa            linear   MAM 02-DEC-2023
DEFINITION  tight junction protein ZO-1 isoform X3 [Dama dama].
ACCESSION   XP_061014861
VERSION     XP_061014861.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158878.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1743
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1743
                     /product="tight junction protein ZO-1 isoform X3"
                     /calculated_mol_wt=193334
     Region          22..108
                     /region_name="PDZ1_ZO1-like"
                     /note="PDZ domain 1 of Zonula Occludens-1 (ZO-1), homologs
                     ZO-2 and ZO-3, and related domains; cd06727"
                     /db_xref="CDD:467209"
     Site            order(33..39,57,60,88,92,95..96)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467209"
     Region          186..263
                     /region_name="PDZ2_ZO1-like_ds"
                     /note="PDZ domain 2 of Zonula Occludens-1 (ZO-1), ZO-2 and
                     ZO-3, and related domains; form domain-swapping dimers;
                     cd06728"
                     /db_xref="CDD:467210"
     Site            order(186..191,196..212,215..217,220,222..223,230,
                     238..239,241..242,254..260)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467210"
     Site            order(197..203,209,212,242,246,249..250)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467210"
     Region          422..501
                     /region_name="PDZ3_ZO1-like_domain"
                     /note="PDZ domain 3 of Zonula Occludens-1 (ZO-1), homologs
                     ZO-2 and ZO-3, and related domains; cd06729"
                     /db_xref="CDD:467211"
     Site            order(432..438,448,451,480,484,487..488)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467211"
     Region          517..581
                     /region_name="SH3_ZO-1"
                     /note="Src homology 3 domain of the Tight junction
                     protein, Zonula occludens protein 1; cd12026"
                     /db_xref="CDD:212959"
     Site            order(517..519,547..549,554,557,576)
                     /site_type="other"
                     /note="PDZ interface"
                     /db_xref="CDD:212959"
     Site            order(519..525,538..539,542,557,565..566,574..576,
                     580..581)
                     /site_type="other"
                     /note="GuK interface [polypeptide binding]"
                     /db_xref="CDD:212959"
     Site            order(525,527,530,534,555..556,575,577..578)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212959"
     Region          615..794
                     /region_name="GuKc"
                     /note="Guanylate kinase homologues; smart00072"
                     /db_xref="CDD:214504"
     Region          <868..1234
                     /region_name="PHA03377"
                     /note="EBNA-3C; Provisional"
                     /db_xref="CDD:177614"
     Region          <1103..1386
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1627..1733
                     /region_name="ZU5"
                     /note="Domain present in ZO-1 and Unc5-like netrin
                     receptors; smart00218"
                     /db_xref="CDD:128514"
     CDS             1..1743
                     /gene="TJP1"
                     /coded_by="XM_061158878.1:129..5360"
                     /db_xref="GeneID:133067875"
ORIGIN      
        1 msaraaaakn ttmeetaiwe qhtvtlhrap gfgfgiaisg grdnphfqsg etsivisdvl
       61 kggpaegqlq endrvamvng vsmdnvehaf avqqlrksgk nakitirrkk kvqipvsrpd
      121 pepvseneed sydeeahdpr sgrgalanrr sekswgrdrs asrerslspr sdrrsvassq
      181 parptkvtlv ksrkneeygl rlashifvke isqdslaard gniqegdvvl kingtvtenm
      241 sltdaktlie rskgklkmvv qrderatlln vpdlsdsihs adaserddis eiqslasdhs
      301 grshdrpprh srsrspdqrs epsdhsrhsp qqpssgslrs reeeriskpg avstpvkhad
      361 dhtpktveev vvernekqap nlpepkpvya qvgqpdvdlp vspsdgvlpn sthedgilrp
      421 smklvkfrkg dsvglrlagg ndvgifvagv ledspaakeg leegdqilrv nnvdftniir
      481 eeavlflldl pkgeevtila qkkkdvyrri vesdvgdsfy irthfeyeke spyglsfnkg
      541 evfrvvdtly ngklgswlai rigknhkeve rgiipnknra eqlasvqytl pktaggdrad
      601 fwrfrglrss krnlrksred lsaqpvqtkf payervvlre agflrpvtif gpiadvarek
      661 lareepdiyq iakseprdag tdqrssgiir lhtikqiidq dkhalldvtp navdrlnyaq
      721 wypivvflnp dskqgvktmr mrlcpesrks arklyershk lrknnhhlft ttinlnsmnd
      781 gwygalkeai qqqqnqlvwv segkadgats ddldlhddrl sylsapgsey smystdsrht
      841 sdyedtdteg gaytdqelde tlndevgtpp esaitrssep vredssgmhp dhqayppysp
      901 qaqpqpghri dspgfktasq qkaeasspgp ylspetnpaa sasavnphvd ltnvrleeps
      961 pappssdsph adslrasgte athvqlrgpe pslsshvgpa kvyrkdpype etmrqnhvlk
     1021 qpaaahpgqr pdkeqglsye pqppyterqa greleqpayr ydassypeqf arnydhrlry
     1081 ddrlltyeeq wpyyddkqpy qtrpldgqpp aeptergyfp rfeepvplsy egrahydplp
     1141 rtstlrheep papapgydvh gryrpdaqpy stagpkappe pkpyldqypr syepvpaqgf
     1201 psragpghye plhstvltpp lgpssqhkpe lpptgtkplp pppapaeeee dpamkpqsvl
     1261 trvkmfenkr sasmenrkde shstsfkppe vmskpagapv pgpkapapsq lsehdraahr
     1321 ipepqrphmk ppedivranh ydpeedeeyy rkqlsyfdrr sfeakppahv pashlseptr
     1381 pahpqsqpqf agysskgkaa eaeavdrsfg ekrydplqat ppppplptqy sqgahpspnt
     1441 alglqahtkg phgegnamsl dfqnslvskp dpppsqnkpa ayrpapreda vqsafypqks
     1501 fpekapangv eqtqktvtpa ynrftpkpyt ssarpferkf espkfnhnll pnetthkpdl
     1561 sskapaspkt llksaqppef dsgvetfsvh tdnklkyqvn svstgpravp vspsaveede
     1621 dedghtvvat argvfnsngg vlssietgvs iiipqgaipe gveqeiyfkv crdnsilppl
     1681 dkekgetlls plvmcgphgl kflkpvelrl phcdpktwqn kclpgdpnyl vgancvsvli
     1741 dhf
//
LOCUS       XP_061014862            1683 aa            linear   MAM 02-DEC-2023
DEFINITION  tight junction protein ZO-1 isoform X4 [Dama dama].
ACCESSION   XP_061014862
VERSION     XP_061014862.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158879.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1683
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1683
                     /product="tight junction protein ZO-1 isoform X4"
                     /calculated_mol_wt=187236
     Region          22..108
                     /region_name="PDZ1_ZO1-like"
                     /note="PDZ domain 1 of Zonula Occludens-1 (ZO-1), homologs
                     ZO-2 and ZO-3, and related domains; cd06727"
                     /db_xref="CDD:467209"
     Site            order(33..39,57,60,88,92,95..96)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467209"
     Region          186..263
                     /region_name="PDZ2_ZO1-like_ds"
                     /note="PDZ domain 2 of Zonula Occludens-1 (ZO-1), ZO-2 and
                     ZO-3, and related domains; form domain-swapping dimers;
                     cd06728"
                     /db_xref="CDD:467210"
     Site            order(186..191,196..212,215..217,220,222..223,230,
                     238..239,241..242,254..260)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467210"
     Site            order(197..203,209,212,242,246,249..250)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467210"
     Region          422..501
                     /region_name="PDZ3_ZO1-like_domain"
                     /note="PDZ domain 3 of Zonula Occludens-1 (ZO-1), homologs
                     ZO-2 and ZO-3, and related domains; cd06729"
                     /db_xref="CDD:467211"
     Site            order(432..438,448,451,480,484,487..488)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467211"
     Region          517..581
                     /region_name="SH3_ZO-1"
                     /note="Src homology 3 domain of the Tight junction
                     protein, Zonula occludens protein 1; cd12026"
                     /db_xref="CDD:212959"
     Site            order(517..519,547..549,554,557,576)
                     /site_type="other"
                     /note="PDZ interface"
                     /db_xref="CDD:212959"
     Site            order(519..525,538..539,542,557,565..566,574..576,
                     580..581)
                     /site_type="other"
                     /note="GuK interface [polypeptide binding]"
                     /db_xref="CDD:212959"
     Site            order(525,527,530,534,555..556,575,577..578)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212959"
     Region          615..794
                     /region_name="GuKc"
                     /note="Guanylate kinase homologues; smart00072"
                     /db_xref="CDD:214504"
     Region          <869..1306
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1018..1154
                     /region_name="PHA03377"
                     /note="EBNA-3C; Provisional"
                     /db_xref="CDD:177614"
     Region          1551..1649
                     /region_name="ZU5"
                     /note="ZU5 domain; pfam00791"
                     /db_xref="CDD:459941"
     CDS             1..1683
                     /gene="TJP1"
                     /coded_by="XM_061158879.1:129..5180"
                     /db_xref="GeneID:133067875"
ORIGIN      
        1 msaraaaakn ttmeetaiwe qhtvtlhrap gfgfgiaisg grdnphfqsg etsivisdvl
       61 kggpaegqlq endrvamvng vsmdnvehaf avqqlrksgk nakitirrkk kvqipvsrpd
      121 pepvseneed sydeeahdpr sgrgalanrr sekswgrdrs asrerslspr sdrrsvassq
      181 parptkvtlv ksrkneeygl rlashifvke isqdslaard gniqegdvvl kingtvtenm
      241 sltdaktlie rskgklkmvv qrderatlln vpdlsdsihs adaserddis eiqslasdhs
      301 grshdrpprh srsrspdqrs epsdhsrhsp qqpssgslrs reeeriskpg avstpvkhad
      361 dhtpktveev vvernekqap nlpepkpvya qvgqpdvdlp vspsdgvlpn sthedgilrp
      421 smklvkfrkg dsvglrlagg ndvgifvagv ledspaakeg leegdqilrv nnvdftniir
      481 eeavlflldl pkgeevtila qkkkdvyrri vesdvgdsfy irthfeyeke spyglsfnkg
      541 evfrvvdtly ngklgswlai rigknhkeve rgiipnknra eqlasvqytl pktaggdrad
      601 fwrfrglrss krnlrksred lsaqpvqtkf payervvlre agflrpvtif gpiadvarek
      661 lareepdiyq iakseprdag tdqrssgiir lhtikqiidq dkhalldvtp navdrlnyaq
      721 wypivvflnp dskqgvktmr mrlcpesrks arklyershk lrknnhhlft ttinlnsmnd
      781 gwygalkeai qqqqnqlvwv segkadgats ddldlhddrl sylsapgsey smystdsrht
      841 sdyedtdteg gaytdqelde tlndevgtpp esaitrssep vredssgmhp dhqayppysp
      901 qaqpqpghri dspgfktasq qvyrkdpype etmrqnhvlk qpaaahpgqr pdkeqglsye
      961 pqppyterqa greleqpayr ydassypeqf arnydhrlry ddrlltyeeq wpyyddkqpy
     1021 qtrpldgqpp aeptergyfp rfeepvplsy egrahydplp rtstlrheep papapgydvh
     1081 gryrpdaqpy stagpkappe pkpyldqypr syepvpaqgf psragpghye plhstvltpp
     1141 lgpssqhkpe lpptgtkplp pppapaeeee dpamkpqsvl trvkmfenkr sasmenrkde
     1201 shstsfkppe vmskpagapv pgpkapapsq lsehdraahr ipepqrphmk ppedivranh
     1261 ydpeedeeyy rkqlsyfdrr sfeakppahv pashlseptr pahpqsqpqf agysskgkaa
     1321 eaeavdrsfg ekrydplqat ppppplptqy sqgahpspnt alglqahtkg phgegnamsl
     1381 dfqnslvskp dpppsqnkpa ayrpapreda vqsafypqks fpekapangv eqtqktvtpa
     1441 ynrftpkpyt ssarpferkf espkfnhnll pnetthkpdl sskapaspkt llksaqppef
     1501 dsgvetfsvh tdnklkyqvn svstgpravp vspsaveede dedghtvvat argvfnsngg
     1561 vlssietgvs iiipqgaipe gveqeiyfkv crdnsilppl dkekgetlls plvmcgphgl
     1621 kflkpvelrl phcasmtpdg wsfalkssds ssgdpktwqn kclpgdpnyl vgancvsvli
     1681 dhf
//
LOCUS       XP_061014863            1663 aa            linear   MAM 02-DEC-2023
DEFINITION  tight junction protein ZO-1 isoform X5 [Dama dama].
ACCESSION   XP_061014863
VERSION     XP_061014863.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158880.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1663
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1663
                     /product="tight junction protein ZO-1 isoform X5"
                     /calculated_mol_wt=185236
     Region          22..108
                     /region_name="PDZ1_ZO1-like"
                     /note="PDZ domain 1 of Zonula Occludens-1 (ZO-1), homologs
                     ZO-2 and ZO-3, and related domains; cd06727"
                     /db_xref="CDD:467209"
     Site            order(33..39,57,60,88,92,95..96)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467209"
     Region          186..263
                     /region_name="PDZ2_ZO1-like_ds"
                     /note="PDZ domain 2 of Zonula Occludens-1 (ZO-1), ZO-2 and
                     ZO-3, and related domains; form domain-swapping dimers;
                     cd06728"
                     /db_xref="CDD:467210"
     Site            order(186..191,196..212,215..217,220,222..223,230,
                     238..239,241..242,254..260)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467210"
     Site            order(197..203,209,212,242,246,249..250)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467210"
     Region          422..501
                     /region_name="PDZ3_ZO1-like_domain"
                     /note="PDZ domain 3 of Zonula Occludens-1 (ZO-1), homologs
                     ZO-2 and ZO-3, and related domains; cd06729"
                     /db_xref="CDD:467211"
     Site            order(432..438,448,451,480,484,487..488)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467211"
     Region          517..581
                     /region_name="SH3_ZO-1"
                     /note="Src homology 3 domain of the Tight junction
                     protein, Zonula occludens protein 1; cd12026"
                     /db_xref="CDD:212959"
     Site            order(517..519,547..549,554,557,576)
                     /site_type="other"
                     /note="PDZ interface"
                     /db_xref="CDD:212959"
     Site            order(519..525,538..539,542,557,565..566,574..576,
                     580..581)
                     /site_type="other"
                     /note="GuK interface [polypeptide binding]"
                     /db_xref="CDD:212959"
     Site            order(525,527,530,534,555..556,575,577..578)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212959"
     Region          615..794
                     /region_name="GuKc"
                     /note="Guanylate kinase homologues; smart00072"
                     /db_xref="CDD:214504"
     Region          <869..1306
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1018..1154
                     /region_name="PHA03377"
                     /note="EBNA-3C; Provisional"
                     /db_xref="CDD:177614"
     Region          1547..1653
                     /region_name="ZU5"
                     /note="Domain present in ZO-1 and Unc5-like netrin
                     receptors; smart00218"
                     /db_xref="CDD:128514"
     CDS             1..1663
                     /gene="TJP1"
                     /coded_by="XM_061158880.1:129..5120"
                     /db_xref="GeneID:133067875"
ORIGIN      
        1 msaraaaakn ttmeetaiwe qhtvtlhrap gfgfgiaisg grdnphfqsg etsivisdvl
       61 kggpaegqlq endrvamvng vsmdnvehaf avqqlrksgk nakitirrkk kvqipvsrpd
      121 pepvseneed sydeeahdpr sgrgalanrr sekswgrdrs asrerslspr sdrrsvassq
      181 parptkvtlv ksrkneeygl rlashifvke isqdslaard gniqegdvvl kingtvtenm
      241 sltdaktlie rskgklkmvv qrderatlln vpdlsdsihs adaserddis eiqslasdhs
      301 grshdrpprh srsrspdqrs epsdhsrhsp qqpssgslrs reeeriskpg avstpvkhad
      361 dhtpktveev vvernekqap nlpepkpvya qvgqpdvdlp vspsdgvlpn sthedgilrp
      421 smklvkfrkg dsvglrlagg ndvgifvagv ledspaakeg leegdqilrv nnvdftniir
      481 eeavlflldl pkgeevtila qkkkdvyrri vesdvgdsfy irthfeyeke spyglsfnkg
      541 evfrvvdtly ngklgswlai rigknhkeve rgiipnknra eqlasvqytl pktaggdrad
      601 fwrfrglrss krnlrksred lsaqpvqtkf payervvlre agflrpvtif gpiadvarek
      661 lareepdiyq iakseprdag tdqrssgiir lhtikqiidq dkhalldvtp navdrlnyaq
      721 wypivvflnp dskqgvktmr mrlcpesrks arklyershk lrknnhhlft ttinlnsmnd
      781 gwygalkeai qqqqnqlvwv segkadgats ddldlhddrl sylsapgsey smystdsrht
      841 sdyedtdteg gaytdqelde tlndevgtpp esaitrssep vredssgmhp dhqayppysp
      901 qaqpqpghri dspgfktasq qvyrkdpype etmrqnhvlk qpaaahpgqr pdkeqglsye
      961 pqppyterqa greleqpayr ydassypeqf arnydhrlry ddrlltyeeq wpyyddkqpy
     1021 qtrpldgqpp aeptergyfp rfeepvplsy egrahydplp rtstlrheep papapgydvh
     1081 gryrpdaqpy stagpkappe pkpyldqypr syepvpaqgf psragpghye plhstvltpp
     1141 lgpssqhkpe lpptgtkplp pppapaeeee dpamkpqsvl trvkmfenkr sasmenrkde
     1201 shstsfkppe vmskpagapv pgpkapapsq lsehdraahr ipepqrphmk ppedivranh
     1261 ydpeedeeyy rkqlsyfdrr sfeakppahv pashlseptr pahpqsqpqf agysskgkaa
     1321 eaeavdrsfg ekrydplqat ppppplptqy sqgahpspnt alglqahtkg phgegnamsl
     1381 dfqnslvskp dpppsqnkpa ayrpapreda vqsafypqks fpekapangv eqtqktvtpa
     1441 ynrftpkpyt ssarpferkf espkfnhnll pnetthkpdl sskapaspkt llksaqppef
     1501 dsgvetfsvh tdnklkyqvn svstgpravp vspsaveede dedghtvvat argvfnsngg
     1561 vlssietgvs iiipqgaipe gveqeiyfkv crdnsilppl dkekgetlls plvmcgphgl
     1621 kflkpvelrl phcdpktwqn kclpgdpnyl vgancvsvli dhf
//
LOCUS       XP_061014864            1751 aa            linear   MAM 02-DEC-2023
DEFINITION  tight junction protein ZO-1 isoform X6 [Dama dama].
ACCESSION   XP_061014864
VERSION     XP_061014864.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158881.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1751
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1751
                     /product="tight junction protein ZO-1 isoform X6"
                     /calculated_mol_wt=194159
     Region          10..96
                     /region_name="PDZ1_ZO1-like"
                     /note="PDZ domain 1 of Zonula Occludens-1 (ZO-1), homologs
                     ZO-2 and ZO-3, and related domains; cd06727"
                     /db_xref="CDD:467209"
     Site            order(21..27,45,48,76,80,83..84)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467209"
     Region          174..251
                     /region_name="PDZ2_ZO1-like_ds"
                     /note="PDZ domain 2 of Zonula Occludens-1 (ZO-1), ZO-2 and
                     ZO-3, and related domains; form domain-swapping dimers;
                     cd06728"
                     /db_xref="CDD:467210"
     Site            order(174..179,184..200,203..205,208,210..211,218,
                     226..227,229..230,242..248)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467210"
     Site            order(185..191,197,200,230,234,237..238)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467210"
     Region          410..489
                     /region_name="PDZ3_ZO1-like_domain"
                     /note="PDZ domain 3 of Zonula Occludens-1 (ZO-1), homologs
                     ZO-2 and ZO-3, and related domains; cd06729"
                     /db_xref="CDD:467211"
     Site            order(420..426,436,439,468,472,475..476)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467211"
     Region          505..569
                     /region_name="SH3_ZO-1"
                     /note="Src homology 3 domain of the Tight junction
                     protein, Zonula occludens protein 1; cd12026"
                     /db_xref="CDD:212959"
     Site            order(505..507,535..537,542,545,564)
                     /site_type="other"
                     /note="PDZ interface"
                     /db_xref="CDD:212959"
     Site            order(507..513,526..527,530,545,553..554,562..564,
                     568..569)
                     /site_type="other"
                     /note="GuK interface [polypeptide binding]"
                     /db_xref="CDD:212959"
     Site            order(513,515,518,522,543..544,563,565..566)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212959"
     Region          603..782
                     /region_name="GuKc"
                     /note="Guanylate kinase homologues; smart00072"
                     /db_xref="CDD:214504"
     Region          <856..1222
                     /region_name="PHA03377"
                     /note="EBNA-3C; Provisional"
                     /db_xref="CDD:177614"
     Region          <1091..1374
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1619..1717
                     /region_name="ZU5"
                     /note="ZU5 domain; pfam00791"
                     /db_xref="CDD:459941"
     CDS             1..1751
                     /gene="TJP1"
                     /coded_by="XM_061158881.1:105..5360"
                     /db_xref="GeneID:133067875"
ORIGIN      
        1 meetaiweqh tvtlhrapgf gfgiaisggr dnphfqsget sivisdvlkg gpaegqlqen
       61 drvamvngvs mdnvehafav qqlrksgkna kitirrkkkv qipvsrpdpe pvseneedsy
      121 deeahdprsg rgalanrrse kswgrdrsas rerslsprsd rrsvassqpa rptkvtlvks
      181 rkneeyglrl ashifvkeis qdslaardgn iqegdvvlki ngtvtenmsl tdaktliers
      241 kgklkmvvqr deratllnvp dlsdsihsad aserddisei qslasdhsgr shdrpprhsr
      301 srspdqrsep sdhsrhspqq pssgslrsre eeriskpgav stpvkhaddh tpktveevvv
      361 ernekqapnl pepkpvyaqv gqpdvdlpvs psdgvlpnst hedgilrpsm klvkfrkgds
      421 vglrlaggnd vgifvagvle dspaakegle egdqilrvnn vdftniiree avlflldlpk
      481 geevtilaqk kkdvyrrive sdvgdsfyir thfeyekesp yglsfnkgev frvvdtlyng
      541 klgswlairi gknhkeverg iipnknraeq lasvqytlpk taggdradfw rfrglrsskr
      601 nlrksredls aqpvqtkfpa yervvlreag flrpvtifgp iadvarekla reepdiyqia
      661 kseprdagtd qrssgiirlh tikqiidqdk halldvtpna vdrlnyaqwy pivvflnpds
      721 kqgvktmrmr lcpesrksar klyershklr knnhhlfttt inlnsmndgw ygalkeaiqq
      781 qqnqlvwvse gkadgatsdd ldlhddrlsy lsapgseysm ystdsrhtsd yedtdtegga
      841 ytdqeldetl ndevgtppes aitrssepvr edssgmhpdh qayppyspqa qpqpghrids
      901 pgfktasqqk aeasspgpyl spetnpaasa savnphvdlt nvrleepspa ppssdsphad
      961 slrasgteat hvqlrgpeps lsshvgpakv yrkdpypeet mrqnhvlkqp aaahpgqrpd
     1021 keqglsyepq ppyterqagr eleqpayryd assypeqfar nydhrlrydd rlltyeeqwp
     1081 yyddkqpyqt rpldgqppae ptergyfprf eepvplsyeg rahydplprt stlrheeppa
     1141 papgydvhgr yrpdaqpyst agpkappepk pyldqyprsy epvpaqgfps ragpghyepl
     1201 hstvltpplg pssqhkpelp ptgtkplppp papaeeeedp amkpqsvltr vkmfenkrsa
     1261 smenrkdesh stsfkppevm skpagapvpg pkapapsqls ehdraahrip epqrphmkpp
     1321 edivranhyd peedeeyyrk qlsyfdrrsf eakppahvpa shlseptrpa hpqsqpqfag
     1381 ysskgkaaea eavdrsfgek rydplqatpp ppplptqysq gahpspntal glqahtkgph
     1441 gegnamsldf qnslvskpdp ppsqnkpaay rpapredavq safypqksfp ekapangveq
     1501 tqktvtpayn rftpkpytss arpferkfes pkfnhnllpn etthkpdlss kapaspktll
     1561 ksaqppefds gvetfsvhtd nklkyqvnsv stgpravpvs psaveedede dghtvvatar
     1621 gvfnsnggvl ssietgvsii ipqgaipegv eqeiyfkvcr dnsilppldk ekgetllspl
     1681 vmcgphglkf lkpvelrlph casmtpdgws falkssdsss gdpktwqnkc lpgdpnylvg
     1741 ancvsvlidh f
//
LOCUS       XP_061014865            1468 aa            linear   MAM 02-DEC-2023
DEFINITION  tight junction protein ZO-1 isoform X7 [Dama dama].
ACCESSION   XP_061014865
VERSION     XP_061014865.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158882.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1468
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1468
                     /product="tight junction protein ZO-1 isoform X7"
                     /calculated_mol_wt=163294
     Region          22..108
                     /region_name="PDZ1_ZO1-like"
                     /note="PDZ domain 1 of Zonula Occludens-1 (ZO-1), homologs
                     ZO-2 and ZO-3, and related domains; cd06727"
                     /db_xref="CDD:467209"
     Site            order(33..39,57,60,88,92,95..96)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467209"
     Region          186..263
                     /region_name="PDZ2_ZO1-like_ds"
                     /note="PDZ domain 2 of Zonula Occludens-1 (ZO-1), ZO-2 and
                     ZO-3, and related domains; form domain-swapping dimers;
                     cd06728"
                     /db_xref="CDD:467210"
     Site            order(186..191,196..212,215..217,220,222..223,230,
                     238..239,241..242,254..260)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467210"
     Site            order(197..203,209,212,242,246,249..250)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467210"
     Region          422..501
                     /region_name="PDZ3_ZO1-like_domain"
                     /note="PDZ domain 3 of Zonula Occludens-1 (ZO-1), homologs
                     ZO-2 and ZO-3, and related domains; cd06729"
                     /db_xref="CDD:467211"
     Site            order(432..438,448,451,480,484,487..488)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467211"
     Region          517..581
                     /region_name="SH3_ZO-1"
                     /note="Src homology 3 domain of the Tight junction
                     protein, Zonula occludens protein 1; cd12026"
                     /db_xref="CDD:212959"
     Site            order(517..519,547..549,554,557,576)
                     /site_type="other"
                     /note="PDZ interface"
                     /db_xref="CDD:212959"
     Site            order(519..525,538..539,542,557,565..566,574..576,
                     580..581)
                     /site_type="other"
                     /note="GuK interface [polypeptide binding]"
                     /db_xref="CDD:212959"
     Site            order(525,527,530,534,555..556,575,577..578)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212959"
     Region          615..794
                     /region_name="GuKc"
                     /note="Guanylate kinase homologues; smart00072"
                     /db_xref="CDD:214504"
     Region          <868..1234
                     /region_name="PHA03377"
                     /note="EBNA-3C; Provisional"
                     /db_xref="CDD:177614"
     Region          <1103..1386
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1468
                     /gene="TJP1"
                     /coded_by="XM_061158882.1:129..4535"
                     /db_xref="GeneID:133067875"
ORIGIN      
        1 msaraaaakn ttmeetaiwe qhtvtlhrap gfgfgiaisg grdnphfqsg etsivisdvl
       61 kggpaegqlq endrvamvng vsmdnvehaf avqqlrksgk nakitirrkk kvqipvsrpd
      121 pepvseneed sydeeahdpr sgrgalanrr sekswgrdrs asrerslspr sdrrsvassq
      181 parptkvtlv ksrkneeygl rlashifvke isqdslaard gniqegdvvl kingtvtenm
      241 sltdaktlie rskgklkmvv qrderatlln vpdlsdsihs adaserddis eiqslasdhs
      301 grshdrpprh srsrspdqrs epsdhsrhsp qqpssgslrs reeeriskpg avstpvkhad
      361 dhtpktveev vvernekqap nlpepkpvya qvgqpdvdlp vspsdgvlpn sthedgilrp
      421 smklvkfrkg dsvglrlagg ndvgifvagv ledspaakeg leegdqilrv nnvdftniir
      481 eeavlflldl pkgeevtila qkkkdvyrri vesdvgdsfy irthfeyeke spyglsfnkg
      541 evfrvvdtly ngklgswlai rigknhkeve rgiipnknra eqlasvqytl pktaggdrad
      601 fwrfrglrss krnlrksred lsaqpvqtkf payervvlre agflrpvtif gpiadvarek
      661 lareepdiyq iakseprdag tdqrssgiir lhtikqiidq dkhalldvtp navdrlnyaq
      721 wypivvflnp dskqgvktmr mrlcpesrks arklyershk lrknnhhlft ttinlnsmnd
      781 gwygalkeai qqqqnqlvwv segkadgats ddldlhddrl sylsapgsey smystdsrht
      841 sdyedtdteg gaytdqelde tlndevgtpp esaitrssep vredssgmhp dhqayppysp
      901 qaqpqpghri dspgfktasq qkaeasspgp ylspetnpaa sasavnphvd ltnvrleeps
      961 pappssdsph adslrasgte athvqlrgpe pslsshvgpa kvyrkdpype etmrqnhvlk
     1021 qpaaahpgqr pdkeqglsye pqppyterqa greleqpayr ydassypeqf arnydhrlry
     1081 ddrlltyeeq wpyyddkqpy qtrpldgqpp aeptergyfp rfeepvplsy egrahydplp
     1141 rtstlrheep papapgydvh gryrpdaqpy stagpkappe pkpyldqypr syepvpaqgf
     1201 psragpghye plhstvltpp lgpssqhkpe lpptgtkplp pppapaeeee dpamkpqsvl
     1261 trvkmfenkr sasmenrkde shstsfkppe vmskpagapv pgpkapapsq lsehdraahr
     1321 ipepqrphmk ppedivranh ydpeedeeyy rkqlsyfdrr sfeakppahv pashlseptr
     1381 pahpqsqpqf agysskgkaa eaeavdrsfg ekrydplqat ppppplptqy sqgahpspnt
     1441 alglqahtkg phgeelisvq tgptsise
//
LOCUS       XP_061014866             300 aa            linear   MAM 02-DEC-2023
DEFINITION  TM2 domain-containing protein 3 isoform X1 [Dama dama].
ACCESSION   XP_061014866
VERSION     XP_061014866.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158883.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..300
                     /product="TM2 domain-containing protein 3 isoform X1"
                     /calculated_mol_wt=32655
     Region          229..284
                     /region_name="TM2"
                     /note="TM2 domain; pfam05154"
                     /db_xref="CDD:428337"
     CDS             1..300
                     /gene="TM2D3"
                     /coded_by="XM_061158883.1:42..944"
                     /db_xref="GeneID:133067877"
ORIGIN      
        1 maapvvqlra lcrlccvvlf lsqfyilsgg gsfseepsqp lpqaikdpgp trtftaapra
       61 aestdippyv mkcpsnglcs rlpadcidck tnfscvygkp vtfdctvkps vtcvkrrtvk
      121 qsavrscgsq eccscdlgpa pcsslgvlrp sqvytqdpdf ksqksfvlnm tcrfcwqlpe
      181 adyecfsssn cravscprqr yaanctvrdh ihclgnrtfl kmlycnwtgg ykwstalalr
      241 pvcccsitlg gfgadrfylg qwreglgklf sfgglgiwtl idvlligvgy vgpadgslyi
//
LOCUS       XP_061014867             296 aa            linear   MAM 02-DEC-2023
DEFINITION  TM2 domain-containing protein 3 isoform X2 [Dama dama].
ACCESSION   XP_061014867
VERSION     XP_061014867.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158884.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..296
                     /product="TM2 domain-containing protein 3 isoform X2"
                     /calculated_mol_wt=32164
     Region          225..280
                     /region_name="TM2"
                     /note="TM2 domain; pfam05154"
                     /db_xref="CDD:428337"
     CDS             1..296
                     /gene="TM2D3"
                     /coded_by="XM_061158884.1:32..922"
                     /db_xref="GeneID:133067877"
ORIGIN      
        1 maapvvqlra lcrlccvvlf lsqfyilsgg gsfseepsqp lpqaikdpgp trtftaapra
       61 aestdippyv mkcpsnglcs rlpadcidck tnfscvygkp vtfdctvkps vtcvkrrtvk
      121 qsavrscgsq eccscdlgpa pcsslgvlrp sqdpdfksqk sfvlnmtcrf cwqlpeadye
      181 cfsssncrav scprqryaan ctvrdhihcl gnrtflkmly cnwtggykws talalrpvcc
      241 csitlggfga drfylgqwre glgklfsfgg lgiwtlidvl ligvgyvgpa dgslyi
//
LOCUS       XP_061014868             294 aa            linear   MAM 02-DEC-2023
DEFINITION  TM2 domain-containing protein 3 isoform X3 [Dama dama].
ACCESSION   XP_061014868
VERSION     XP_061014868.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158885.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..294
                     /product="TM2 domain-containing protein 3 isoform X3"
                     /calculated_mol_wt=31993
     Region          229..278
                     /region_name="TM2"
                     /note="TM2 domain; pfam05154"
                     /db_xref="CDD:428337"
     CDS             1..294
                     /gene="TM2D3"
                     /coded_by="XM_061158885.1:32..916"
                     /db_xref="GeneID:133067877"
ORIGIN      
        1 maapvvqlra lcrlccvvlf lsqfyilsgg gsfseepsqp lpqaikdpgp trtftaapra
       61 aestdippyv mkcpsnglcs rlpadcidck tnfscvygkp vtfdctvkps vtcvkrrtvk
      121 qsavrscgsq eccscdlgpa pcsslgvlrp sqvytqdpdf ksqksfvlnm tcrfcwqlpe
      181 adyecfsssn cravscprqr yaanctvrdh ihclgnrtfl kmlycnwtgg ykwstalals
      241 itlggfgadr fylgqwregl gklfsfgglg iwtlidvlli gvgyvgpadg slyi
//
LOCUS       XP_061014869             258 aa            linear   MAM 02-DEC-2023
DEFINITION  TM2 domain-containing protein 3 isoform X4 [Dama dama].
ACCESSION   XP_061014869
VERSION     XP_061014869.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158886.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..258
                     /product="TM2 domain-containing protein 3 isoform X4"
                     /calculated_mol_wt=28186
     Region          187..242
                     /region_name="TM2"
                     /note="TM2 domain; pfam05154"
                     /db_xref="CDD:428337"
     CDS             1..258
                     /gene="TM2D3"
                     /coded_by="XM_061158886.1:32..808"
                     /db_xref="GeneID:133067877"
ORIGIN      
        1 maapvvqlra lcrlccvvlf lsqfyilsgg gsfseepsqp lpqaikdpgp trtftaapra
       61 aestdippyv mkcpsnglcs rlpadcidck tnfscvygkp vtfdctvkps vtcvdpdfks
      121 qksfvlnmtc rfcwqlpead yecfsssncr avscprqrya anctvrdhih clgnrtflkm
      181 lycnwtggyk wstalalrpv cccsitlggf gadrfylgqw reglgklfsf gglgiwtlid
      241 vlligvgyvg padgslyi
//
LOCUS       XP_061014870             252 aa            linear   MAM 02-DEC-2023
DEFINITION  TM2 domain-containing protein 3 isoform X5 [Dama dama].
ACCESSION   XP_061014870
VERSION     XP_061014870.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158887.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..252
                     /product="TM2 domain-containing protein 3 isoform X5"
                     /calculated_mol_wt=27524
     Region          187..236
                     /region_name="TM2"
                     /note="TM2 domain; pfam05154"
                     /db_xref="CDD:428337"
     CDS             1..252
                     /gene="TM2D3"
                     /coded_by="XM_061158887.1:32..790"
                     /db_xref="GeneID:133067877"
ORIGIN      
        1 maapvvqlra lcrlccvvlf lsqfyilsgg gsfseepsqp lpqaikdpgp trtftaapra
       61 aestdippyv mkcpsnglcs rlpadcidck tnfscvygkp vtfdctvkps vtcvdpdfks
      121 qksfvlnmtc rfcwqlpead yecfsssncr avscprqrya anctvrdhih clgnrtflkm
      181 lycnwtggyk wstalalsit lggfgadrfy lgqwreglgk lfsfgglgiw tlidvlligv
      241 gyvgpadgsl yi
//
LOCUS       XP_061014871             245 aa            linear   MAM 02-DEC-2023
DEFINITION  TM2 domain-containing protein 3 isoform X6 [Dama dama].
ACCESSION   XP_061014871
VERSION     XP_061014871.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158888.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..245
                     /product="TM2 domain-containing protein 3 isoform X6"
                     /calculated_mol_wt=26855
     CDS             1..245
                     /gene="TM2D3"
                     /coded_by="XM_061158888.1:32..769"
                     /db_xref="GeneID:133067877"
ORIGIN      
        1 maapvvqlra lcrlccvvlf lsqfyilsgg gsfseepsqp lpqaikdpgp trtftaapra
       61 aestdippyv mkcpsnglcs rlpadcidck tnfscvygkp vtfdctvkps vtcvkrrtvk
      121 qsavrscgsq eccscdlgpa pcsslgvlrp sqvytqdpdf ksqksfvlnm tcrfcwqlpe
      181 adyecfsssn cravscprqr yaanctvrdh ihclgnrtfl kmlycnwtgg ykwstalalr
      241 aflhg
//
LOCUS       XP_061014872             255 aa            linear   MAM 02-DEC-2023
DEFINITION  U2 small nuclear ribonucleoprotein A' [Dama dama].
ACCESSION   XP_061014872
VERSION     XP_061014872.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158889.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..255
                     /product="U2 small nuclear ribonucleoprotein A'"
                     /calculated_mol_wt=28238
     Region          1..175
                     /region_name="LRR_9"
                     /note="Leucine-rich repeat; pfam14580"
                     /db_xref="CDD:405295"
     Region          22..43
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          44..65
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          66..89
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          90..114
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          115..127
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     CDS             1..255
                     /gene="SNRPA1"
                     /coded_by="XM_061158889.1:72..839"
                     /db_xref="GeneID:133067878"
ORIGIN      
        1 mvkltaelie qaaqytnavr dreldlrgyk ipvienlgat ldqfdaidfs dneirkldgf
       61 pllrrlktll vnnnricrig egldqalpcl teliltnnsl velgdldpla slksltylsi
      121 lrnpvtnkkh yrlyviykvp qvrvldfqkv klkerqeaek mfkgkrgaql akdiarrskt
      181 fnpgaglptd kkkggpspgd veaiknaian astlaeverl kgllqsgqip grerragptd
      241 dgeeemeedt vangs
//
LOCUS       XP_061014873             951 aa            linear   MAM 02-DEC-2023
DEFINITION  proprotein convertase subtilisin/kexin type 6 [Dama dama].
ACCESSION   XP_061014873
VERSION     XP_061014873.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158890.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..951
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..951
                     /product="proprotein convertase subtilisin/kexin type 6"
                     /calculated_mol_wt=104919
     Region          68..144
                     /region_name="S8_pro-domain"
                     /note="Peptidase S8 pro-domain; pfam16470"
                     /db_xref="CDD:465126"
     Region          155..449
                     /region_name="Peptidases_S8_Protein_convertases_Kexins_Fur
                     in-lik"
                     /note="Peptidase S8 family domain in Protein convertases;
                     cd04059"
                     /db_xref="CDD:173789"
     Site            order(157,209,255)
                     /site_type="other"
                     /note="calcium binding site 1 [ion binding]"
                     /db_xref="CDD:173789"
     Site            order(200..201,238,241,283,301,311,342,353,415)
                     /site_type="active"
                     /db_xref="CDD:173789"
     Site            order(200,241,415)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:173789"
     Site            order(348,378)
                     /site_type="other"
                     /note="calcium binding site 2 [ion binding]"
                     /db_xref="CDD:173789"
     Site            order(356,358,361,363)
                     /site_type="other"
                     /note="calcium binding site 3 [ion binding]"
                     /db_xref="CDD:173789"
     Region          534..624
                     /region_name="P_proprotein"
                     /note="Proprotein convertase P-domain; pfam01483"
                     /db_xref="CDD:460225"
     Region          676..786
                     /region_name="GF_recep_IV"
                     /note="Growth factor receptor domain IV; pfam14843"
                     /db_xref="CDD:464344"
     Region          781..827
                     /region_name="FU"
                     /note="Furin-like repeats. Cysteine rich region. Exact
                     function of the domain is not known. Furin is a
                     serine-kinase dependent proprotein processor. Other
                     members of this family include endoproteases and cell
                     surface receptors; cd00064"
                     /db_xref="CDD:238021"
     Region          826..868
                     /region_name="FU"
                     /note="Furin-like repeats; smart00261"
                     /db_xref="CDD:214589"
     Region          878..912
                     /region_name="FU"
                     /note="Furin-like repeats; smart00261"
                     /db_xref="CDD:214589"
     Region          924..947
                     /region_name="PLAC"
                     /note="PLAC (protease and lacunin) domain; pfam08686"
                     /db_xref="CDD:462560"
     CDS             1..951
                     /gene="PCSK6"
                     /coded_by="XM_061158890.1:1..2856"
                     /db_xref="GeneID:133067879"
ORIGIN      
        1 mpprappapg prppprapaa agdaghdpra aggpglrplv prpwrwllll alpaacsapp
       61 prpvytnhwa vqvlggpava drvaaahgyl nlgqignled yyhfyhsktf krstlssrgp
      121 htflrmdpqv kwlqqqevkr rvkrqvrndp qalyfndpiw snmwymhcgd knsrcrsemn
      181 vqaawkrgyt gknvvvtild dgiernhpdl apnydsyasy dvngndydps prydasnenk
      241 hgtrcageva asannsyciv gvaynakigg irmldgdvtd mveakslgtr pnyidiysas
      301 wgpdddgktv dgpgrlarqa fehgirkgrq glgsifvwas gnggregdhc scdgytnsvy
      361 tisvsstten ghrpwyleec astlattyss gafyerrivt tdlrqrctdg htgtsvsapm
      421 vagiialale ansqltwrdv qhllvktsrp ahlkandwkv ngaghkvshl ygfglvdada
      481 lvveakkwma vppqhtcvai tdkrprsipv vqtlwtsalt tacadhtdqh vgflehvvar
      541 vsishprrgd lqihltspsg trsqllakrl ldhsnegftn wefmtvhcwg ekaegewtle
      601 iqdmpsqvrn rekqgklrew tlvlygtaeh pyttfsahqs rprmldlsas elepprtavs
      661 psqadvpede edytgvchpe cgdkgcdgpg adqclncvhf slgsvktsrk cvsacplgyf
      721 gdtaarrcrr chkgcetcsg rgstqcltcr rgfyhhqevn scvtlcpagf yadesqkncl
      781 kchpsckkci depekctvck egfslargsc ipdcepgtyf dselircgec hhtcrtcvgp
      841 sreecihcap gfhfqdwrcv pacgegfyae dmpglphkvc rrcdesclsc egsskncsrc
      901 kvgftqlgts citnhtcsna demfcemvks nrlcerklfi qfccrtclla g
//
LOCUS       XP_061014874            1680 aa            linear   MAM 02-DEC-2023
DEFINITION  A disintegrin and metalloproteinase with thrombospondin motifs 7
            [Dama dama].
ACCESSION   XP_061014874
VERSION     XP_061014874.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158891.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1680
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1680
                     /product="A disintegrin and metalloproteinase with
                     thrombospondin motifs 7"
                     /calculated_mol_wt=182754
     Region          44..184
                     /region_name="Pep_M12B_propep"
                     /note="Reprolysin family propeptide; pfam01562"
                     /db_xref="CDD:460254"
     Region          241..448
                     /region_name="ZnMc_ADAMTS_like"
                     /note="Zinc-dependent metalloprotease, ADAMTS_like
                     subgroup. ADAMs (A Disintegrin And Metalloprotease) are
                     glycoproteins, which play roles in cell signaling, cell
                     fusion, and cell-cell interactions. This particular
                     subfamily represents domain architectures that...;
                     cd04273"
                     /db_xref="CDD:239801"
     Site            order(387..388,391,397)
                     /site_type="active"
                     /db_xref="CDD:239801"
     Region          463..527
                     /region_name="ADAMTS_CR_2"
                     /note="ADAMTS cysteine-rich domain 2; pfam17771"
                     /db_xref="CDD:465496"
     Region          540..592
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          598..696
                     /region_name="ADAMTS_CR_3"
                     /note="ADAMTS cysteine-rich domain; pfam19236"
                     /db_xref="CDD:437068"
     Region          698..808
                     /region_name="ADAMTS_spacer1"
                     /note="ADAM-TS Spacer 1; pfam05986"
                     /db_xref="CDD:461796"
     Region          824..878
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          882..941
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          945..993
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          <1083..1462
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1411..1459
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1462..1517
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1520..1566
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1569..1624
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     CDS             1..1680
                     /gene="ADAMTS7"
                     /coded_by="XM_061158891.1:131..5173"
                     /db_xref="GeneID:133067880"
ORIGIN      
        1 mpcgpsprsp apllrplllf lsvlalgahg sapghaaegr aaldivhpvr vdsggsflsy
       61 elwpralrkr dlsarpsapt fyelqyrgre lrfnltanph llapgfvset rrrgglgrah
      121 irarapachl lgevqdpele gglaaisacd glkgvfqlsn edyfiepldg vparpghaqp
      181 hvvykrqape kwaepgdsra pgtcgvkefp elelqrerwe qrqqwrrrlr rryrrsvske
      241 kwvetlvvad akmveyhgqp nvesyvltim nmvaglfhdp signpihiti vrlilledee
      301 edlkithhad ntlrsfckwq ksinmkgdah plhhdtaill trkdlcaamn qpcetlglsh
      361 vagmcqphrs csinedtglp laftvahelg hsfgiqhdgs gndcepvgkr pfimspqlly
      421 daapltwsrc sreyitrfld rgwglclddp ptkdvidfps ilpgvlydvg hqcrlqygay
      481 safcddmdnv chtlwcsvgt tchskldaav dgtscgeskw clngecvplg frpeavdggw
      541 sgwsawslcs rscgvgvqsa erqctqpapk ykgkycvger krfrlcslqa cpagrpsfrq
      601 vqcsrfdaml ykgqlhtwvp vvndvnpcel hcrpsneyfa eklrdavvdg tpcyqgqasr
      661 dlcingickn vgcdfeidsg avedrcgvch gngstchtvs gtfeeaeglg yvdvglipvg
      721 areiriveva eaanflalrs edpdkyflng gwtiqwngdy evagttftya rtgnwenlts
      781 pgptdepvwi qllfqesnpg vryeyiihre agghdhiqpp efswrygpws kctvtcgtgm
      841 qrqsvhcter qagpvderhc dpldrpddrq rkcseepcpa rwwagewqlc ssscgpggls
      901 rravicirsv gldeqralep pacehlprpp aekacnrdvp cpatwavgnw secsvtcgpg
      961 tqrrsilctn dtgipcdeaq qpareatcll ppcpqaldtl gpegsgsgsf spelfnevdf
     1021 ipghlaprpp ppsspkpasm gnaiqeegre lgppgpvfvd dfyydynfin fhedlsygpf
     1081 edpdsdpvdt gdwrppppst aaepptgtpv ppteppgtrd egalgdgspa pwpsqaghsp
     1141 pppleqtpgn slvnflpeed apigapdlgl pslpwpptsi smetpaapgs qnqvlgaeds
     1201 qslpppprwe rtnevsddee alghgaprlp qrpsptspsl ssvgtthssp sprtvelwts
     1261 gtvawepalg gglgpldsel wptmggappi ppptatlpdt qgtdsplela tatlstpgpa
     1321 lqdlqtlamp gtfllmaptg lghmpwvtpq slgplgqpep psskmppspg llstpaqdsp
     1381 pnssrapgpl dpspveegfp vdllparnas wevgnwsqcs ttcglgavwr lvrcssgree
     1441 dcapagrpqp arrchlrpca awhtgnwskc srscgggsst rdvqcvdtrd lqplrpfhcq
     1501 pgpakpparr pcgaqpclsw ytsswrecse acgggeqqrl vtcpepglce ealrpnstrs
     1561 cnthpctqwv vgpwgqcsap cgggvqrrlv kcintqtglp eedsdlcghe awpessrpcg
     1621 tqdceltepp rcerdrlsfg fcetlrllgr cqlptvraqc crscpppgvp srghqrvarr
//
LOCUS       XP_061014875             963 aa            linear   MAM 02-DEC-2023
DEFINITION  TBC1 domain family member 2B [Dama dama].
ACCESSION   XP_061014875
VERSION     XP_061014875.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158892.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..963
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..963
                     /product="TBC1 domain family member 2B"
                     /calculated_mol_wt=109624
     Region          35..143
                     /region_name="PH_TBC1D2A"
                     /note="TBC1 domain family member 2A pleckstrin homology
                     (PH) domain; cd01265"
                     /db_xref="CDD:269966"
     Region          293..>549
                     /region_name="PLN02939"
                     /note="transferase, transferring glycosyl groups"
                     /db_xref="CDD:215507"
     Region          659..876
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     CDS             1..963
                     /gene="TBC1D2B"
                     /coded_by="XM_061158892.1:1..2892"
                     /db_xref="GeneID:133067881"
ORIGIN      
        1 mpgpaargee ggggegaapg aaaepgvgpg reparlcgyl qklsgkgplr gyrnrwfvfd
       61 arrcylyyfk spqdalplgh ldiadacfsy sgpdeaaepg aeppahfqvr sagavtvlka
      121 pnrqlmtywl qelqqkrwey cnsldmvkwd srtsptpgdf sqglvardnt dlinlhsnas
      181 aekarnvlav eaapgelvge qaanqptpgp pnssnfsfkq wgtelrnsms sfrpgrghnd
      241 srrsvfytne ewellepspk eleesmvqee rkkqvpegnk gitgsgfpfd fgripykgkr
      301 plkemigsyk nrhsigdpsp evpsgsgsts kpasemqllv qnqqeelerl rkdlasqkel
      361 vrllqqtvrs sqydkyftss rlcdgvpqdt lgllhqkddq ilgltnqler fnqekdslqq
      421 evkmlkskvg elserlgmlm etiqakdevi mklsrqlsec egsassptcv pgspaaapag
      481 rdqleldwlk dnlqgyktqn kflnkeilel aalrrnaerr erdlmakyss leaklcqies
      541 kylillqemk tpvcseeqgp ardviaqlle dalqvespeh peqafikphl vseydiygfk
      601 tvpeddeeek lvakvraldl ktlyltenqe vstgvkweny fastvnremt cspelknlvr
      661 agiphehrsk vwkwcvdrhi kkfkdstqpg yfqtllqkal ekqnpaskqi eldllrtlpn
      721 nkhyscptse giqklrnvll afswrnpdig ycqglnrlva vallyleqed afwclvtive
      781 vfmprdyytk tllgsqvdqr vfrdlmsekl prlhahfeqy kvdytlitfn wflvvfvdsv
      841 vsdilfkiwd sflyegpkvi frfalalfky keeeilklqd smsifkylry ftrtildark
      901 ligisfgdln pfplrqirnr rayhlekvrl elteleaire dflrerdtsp dkgelvsdee
      961 edt
//
LOCUS       XP_061014876             461 aa            linear   MAM 02-DEC-2023
DEFINITION  SH2 domain-containing protein 7 isoform X1 [Dama dama].
ACCESSION   XP_061014876
VERSION     XP_061014876.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158893.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..461
                     /product="SH2 domain-containing protein 7 isoform X1"
                     /calculated_mol_wt=49999
     Region          43..144
                     /region_name="SH2_SH2D7"
                     /note="Src homology 2 domain found in the SH2 domain
                     containing protein 7 (SH2D7); cd10417"
                     /db_xref="CDD:199832"
     Site            order(58,76,96,98)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:199832"
     Site            order(97,126)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:199832"
     CDS             1..461
                     /gene="SH2D7"
                     /coded_by="XM_061158893.1:59..1444"
                     /db_xref="GeneID:133067882"
ORIGIN      
        1 meahlrhlsl grgpegagdr qalaelqela lswfmetqap lilqngalpp wfhgfitrkk
       61 teqllrdkal gsflirlsdr atgyilsyrg sdrcrhfvin qlrnrrylis gdtqshgtla
      121 elvrhyqeaq fepfgeslsa acprmedndl ydaitlglhq tnpsleyppe kassppasle
      181 asprnlseee skefcpslqa pvkapplper rasllsnsfg gstdtiyadl rkmnqarlgl
      241 gtdvpgwqgp vpsgsqacsp gkeaprrlsd gsqnkpdgpg palsgvspdq gprvsptswg
      301 lllpssseas gssgatwshg spnlsrgaqp csesscadty esiwtedlpe dardvpcqeg
      361 gsayeqiavc cggpartpyp gmsptyskls gftdcgyeri sgvpelpepr htyeqipgas
      421 sqeqggwtdt qiqaarskea grthkpdklr rlfftdkkhk p
//
LOCUS       XP_061014877             455 aa            linear   MAM 02-DEC-2023
DEFINITION  SH2 domain-containing protein 7 isoform X2 [Dama dama].
ACCESSION   XP_061014877
VERSION     XP_061014877.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158894.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..455
                     /product="SH2 domain-containing protein 7 isoform X2"
                     /calculated_mol_wt=49323
     Region          43..144
                     /region_name="SH2_SH2D7"
                     /note="Src homology 2 domain found in the SH2 domain
                     containing protein 7 (SH2D7); cd10417"
                     /db_xref="CDD:199832"
     Site            order(58,76,96,98)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:199832"
     Site            order(97,126)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:199832"
     CDS             1..455
                     /gene="SH2D7"
                     /coded_by="XM_061158894.1:59..1426"
                     /db_xref="GeneID:133067882"
ORIGIN      
        1 meahlrhlsl grgpegagdr qalaelqela lswfmetqap lilqngalpp wfhgfitrkk
       61 teqllrdkal gsflirlsdr atgyilsyrg sdrcrhfvin qlrnrrylis gdtqshgtla
      121 elvrhyqeaq fepfgeslsa acprmedndl ydaitlglhq tnpsleyppe kassppasle
      181 asprnlseee skeapvkapp lperraslls nsfggstdti yadlrkmnqa rlglgtdvpg
      241 wqgpvpsgsq acspgkeapr rlsdgsqnkp dgpgpalsgv spdqgprvsp tswglllpss
      301 seasgssgat wshgspnlsr gaqpcsessc adtyesiwte dlpedardvp cqeggsayeq
      361 iavccggpar tpypgmspty sklsgftdcg yerisgvpel peprhtyeqi pgassqeqgg
      421 wtdtqiqaar skeagrthkp dklrrlfftd kkhkp
//
LOCUS       XP_061014878             187 aa            linear   MAM 02-DEC-2023
DEFINITION  calcium and integrin-binding family member 2 isoform X1 [Dama
            dama].
ACCESSION   XP_061014878
VERSION     XP_061014878.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158895.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..187
                     /product="calcium and integrin-binding family member 2
                     isoform X1"
                     /calculated_mol_wt=21500
     Region          <62..173
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..187
                     /gene="CIB2"
                     /coded_by="XM_061158895.1:88..651"
                     /db_xref="GeneID:133067884"
ORIGIN      
        1 mgnkqtifte eqldnyqdct ffnkkdilkl harfyelapn lvpmdyrksp ivhvpmsliv
       61 qmpelrenpf keriveafse dgegnltfnd fvdmfsvlce saprelkasy afkiydfntd
      121 nfickedlel tlarltksel dedevvlvcd kvieeadldg dgklgfadfe dmiakapdfl
      181 stfhiri
//
LOCUS       XP_061014879             159 aa            linear   MAM 02-DEC-2023
DEFINITION  calcium and integrin-binding family member 2 isoform X2 [Dama
            dama].
ACCESSION   XP_061014879
VERSION     XP_061014879.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158896.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..159
                     /product="calcium and integrin-binding family member 2
                     isoform X2"
                     /calculated_mol_wt=18136
     Region          <34..145
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..159
                     /gene="CIB2"
                     /coded_by="XM_061158896.1:340..819"
                     /db_xref="GeneID:133067884"
ORIGIN      
        1 mlharfyela pnlvpmdyrk spivhvpmsl ivqmpelren pfkeriveaf sedgegnltf
       61 ndfvdmfsvl cesaprelka syafkiydfn tdnfickedl eltlarltks eldedevvlv
      121 cdkvieeadl dgdgklgfad fedmiakapd flstfhiri
//
LOCUS       XP_061014880             153 aa            linear   MAM 02-DEC-2023
DEFINITION  calcium and integrin-binding family member 2 isoform X3 [Dama
            dama].
ACCESSION   XP_061014880
VERSION     XP_061014880.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158897.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..153
                     /product="calcium and integrin-binding family member 2
                     isoform X3"
                     /calculated_mol_wt=17654
     Region          71..139
                     /region_name="EF-hand_7"
                     /note="EF-hand domain pair; pfam13499"
                     /db_xref="CDD:463900"
     CDS             1..153
                     /gene="CIB2"
                     /coded_by="XM_061158897.1:88..549"
                     /db_xref="GeneID:133067884"
ORIGIN      
        1 mgnkqtifte eqldnyqdct ffnkkdilkl harfyelapn lvpmdyrksp ivhvpmsliv
       61 qmpelrenpf keriveafse ddfntdnfic kedleltlar ltkseldede vvlvcdkvie
      121 eadldgdgkl gfadfedmia kapdflstfh iri
//
LOCUS       XP_061014881             144 aa            linear   MAM 02-DEC-2023
DEFINITION  calcium and integrin-binding family member 2 isoform X4 [Dama
            dama].
ACCESSION   XP_061014881
VERSION     XP_061014881.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158898.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..144
                     /product="calcium and integrin-binding family member 2
                     isoform X4"
                     /calculated_mol_wt=16383
     Region          <19..130
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..144
                     /gene="CIB2"
                     /coded_by="XM_061158898.1:288..722"
                     /db_xref="GeneID:133067884"
ORIGIN      
        1 mdyrkspivh vpmslivqmp elrenpfker iveafsedge gnltfndfvd mfsvlcesap
       61 relkasyafk iydfntdnfi ckedleltla rltkselded evvlvcdkvi eeadldgdgk
      121 lgfadfedmi akapdflstf hiri
//
LOCUS       XP_061014882             144 aa            linear   MAM 02-DEC-2023
DEFINITION  calcium and integrin-binding family member 2 isoform X4 [Dama
            dama].
ACCESSION   XP_061014882
VERSION     XP_061014882.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158899.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..144
                     /product="calcium and integrin-binding family member 2
                     isoform X4"
                     /calculated_mol_wt=16383
     Region          <19..130
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..144
                     /gene="CIB2"
                     /coded_by="XM_061158899.1:181..615"
                     /db_xref="GeneID:133067884"
ORIGIN      
        1 mdyrkspivh vpmslivqmp elrenpfker iveafsedge gnltfndfvd mfsvlcesap
       61 relkasyafk iydfntdnfi ckedleltla rltkselded evvlvcdkvi eeadldgdgk
      121 lgfadfedmi akapdflstf hiri
//
LOCUS       XP_061014883             366 aa            linear   MAM 02-DEC-2023
DEFINITION  isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial [Dama
            dama].
ACCESSION   XP_061014883
VERSION     XP_061014883.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158900.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..366
                     /product="isocitrate dehydrogenase [NAD] subunit alpha,
                     mitochondrial"
                     /calculated_mol_wt=39567
     Region          29..362
                     /region_name="mito_nad_idh"
                     /note="isocitrate dehydrogenase, NAD-dependent,
                     mitochondrial type; TIGR00175"
                     /db_xref="CDD:272942"
     CDS             1..366
                     /gene="IDH3A"
                     /coded_by="XM_061158900.1:77..1177"
                     /db_xref="GeneID:133067885"
ORIGIN      
        1 magpawiskv srllgafhnq kqvtrgfagg vktvtlipgd gigpeisaav mkifdaakap
       61 iqweernvta iqgpggkwmi ppeakesmdk nkmglkgplk tpiaaghpsm nlllrktfdl
      121 yanvrpcvsi egyktpyhdv nivtirente geysgiehvi vdgvvqsikl iteaaskria
      181 efafeyarnn hrsnvtavhk animrmsdgl flqkcrevae nckdikfnem yldtvclnmv
      241 qdpsqfdvlv mpnlygdils dlcagliggl gvtpsgniga ngvaifesvh gtapdiagkd
      301 manptallls avmmlrhmgl fdhaakieta cfatikdgks ltkdlggnsk csdfteeicr
      361 rvkdld
//
LOCUS       XP_061014884             426 aa            linear   MAM 02-DEC-2023
DEFINITION  dnaJ homolog subfamily A member 4 isoform X1 [Dama dama].
ACCESSION   XP_061014884
VERSION     XP_061014884.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158901.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..426
                     /product="dnaJ homolog subfamily A member 4 isoform X1"
                     /calculated_mol_wt=47861
     Region          31..423
                     /region_name="PTZ00037"
                     /note="DnaJ_C chaperone protein; Provisional"
                     /db_xref="CDD:240236"
     CDS             1..426
                     /gene="DNAJA4"
                     /coded_by="XM_061158901.1:166..1446"
                     /db_xref="GeneID:133067886"
ORIGIN      
        1 marggsqnwt sgesegrpee qttedtgdkm vketqyydil gvkpsaspee ikkayrklal
       61 kyhpdknpde gekfklisqa yevlsdpkkr diydqggeqa ikeggsgsps fsspmdifdm
      121 ffggggrmar errgknvvhq lsvtledlyn gvtkklalqk nvicekcegi ggkkgsvekc
      181 pvckgrgmqi hiqqigpgmv qqiqtvciec kgqgerinpk drcescngak virekkiiev
      241 hvekgmkdgq kilfhgegdq epelepgdvi ivldqkdhsv fqrrghdlim kmkiqlseal
      301 cgfkktiktl ddrvlvitsk sgevikhgdl kcvrnegmpi yksplekgil iiqflvifpe
      361 khwlpqdkls qleallpprq kvritedmdq velkefnpne qnwrqhreay eedddgprag
      421 vqcqta
//
LOCUS       XP_061014885             239 aa            linear   MAM 02-DEC-2023
DEFINITION  dnaJ homolog subfamily A member 4 isoform X2 [Dama dama].
ACCESSION   XP_061014885
VERSION     XP_061014885.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158902.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..239
                     /product="dnaJ homolog subfamily A member 4 isoform X2"
                     /calculated_mol_wt=27276
     Region          <2..236
                     /region_name="PTZ00037"
                     /note="DnaJ_C chaperone protein; Provisional"
                     /db_xref="CDD:240236"
     CDS             1..239
                     /gene="DNAJA4"
                     /coded_by="XM_061158902.1:300..1019"
                     /db_xref="GeneID:133067886"
ORIGIN      
        1 mqihiqqigp gmvqqiqtvc ieckgqgeri npkdrcescn gakvirekki ievhvekgmk
       61 dgqkilfhge gdqepelepg dviivldqkd hsvfqrrghd limkmkiqls ealcgfkkti
      121 ktlddrvlvi tsksgevikh gdlkcvrneg mpiyksplek giliiqflvi fpekhwlpqd
      181 klsqleallp prqkvrited mdqvelkefn pneqnwrqhr eayeedddgp ragvqcqta
//
LOCUS       XP_061014886             305 aa            linear   MAM 02-DEC-2023
DEFINITION  superkiller complex protein 8 [Dama dama].
ACCESSION   XP_061014886
VERSION     XP_061014886.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158903.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..305
                     /product="superkiller complex protein 8"
                     /calculated_mol_wt=33438
     Region          <13..302
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          19..62
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          68..105
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          110..146
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          152..188
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          193..229
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          236..271
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..305
                     /gene="SKIC8"
                     /coded_by="XM_061158903.1:148..1065"
                     /db_xref="GeneID:133067887"
ORIGIN      
        1 mtnqysilfk qeqahddaiw svawgsnkke nsetvvtgsl ddlvkvwkwr dekldlqwsl
       61 eghqlgvvsv dishtlpiaa sssldahirl wdlengkqik sidagpvdaw tlafspdsqy
      121 latgthvgkv nifgvesgkk eysldtrgkf ilsiayspdg kylasgaidg iinifdiatg
      181 kllhtlegha mpirsltfsp dsqllvtasd dgyikiydvq hanlagtlsg haswvlnvaf
      241 cpddthfvss ssdksvkvwd vgtrtcvhtf fdhqdqvwgv kyngngskiv svgddqeihi
      301 ydcpi
//
LOCUS       XP_061014887             964 aa            linear   MAM 02-DEC-2023
DEFINITION  iron-responsive element-binding protein 2 [Dama dama].
ACCESSION   XP_061014887
VERSION     XP_061014887.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158904.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..964
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..964
                     /product="iron-responsive element-binding protein 2"
                     /calculated_mol_wt=104993
     Region          10..962
                     /region_name="PTZ00092"
                     /note="aconitate hydratase-like protein; Provisional"
                     /db_xref="CDD:240263"
     CDS             1..964
                     /gene="IREB2"
                     /coded_by="XM_061158904.1:131..3025"
                     /db_xref="GeneID:133067888"
ORIGIN      
        1 mdapsagyaf eylietlnds shkkffnvpr lggtkydvlp ysirvlleaa vrncdgflmk
       61 kedvmnildw ktkqsnvevp ffparvllqd ftgipamvdf aamreavktl ggdpkkvhpa
      121 cptdltvdhs lqidfnkcai qnapnpgggd lqkagklspl rvqpkklpcr gqatcrgscd
      181 sgelgrnsgk fssqientpi lcpfhlqpvp epetvlknqe vefgrnrerl qffkwssrvf
      241 knvavippgt gmahqvnley lsrvvfeekd llfpdsvvgt dshitmvngl gilgwgvggi
      301 eteavmlglp vsltlpevvg celtgssnpf vtsidvvlgi tkhlrqvgva gkfveffgsg
      361 vsqlsivdrt tianmcpeyg ailsffpvdn vtlkhlehtg fdkaklesme aylkavklfr
      421 neqdnsgepe ysqviqinln sivpsvsgpk rpqdrvaltd mksdfqacln ekvgfkgfqi
      481 aaekqndivs ihyegseykl shgsvviaav isctnncnps vmlaagllak kaveaglqvk
      541 pyirtslspg sgmvthylss sgvlpylskl gfeiigygcs tcvgntapls eavlnavkqg
      601 dlvtcgvlsg nknfegrlcd cvranylasp plvvayaiag tvnidfqtep lgtdptgkni
      661 ylhdiwpsre evhqieeehv vlsmfkalke kiemgnkrwn sleapdsvlf pwdlkstyir
      721 cpsffdkltk epvalqsien ahvllylgdc ittdhispag siarssaaak yltnrgltpr
      781 efnsygarrg ndavmtrgtf aniklfnkfi gkpapktihf psgqtldvfe aaelyqkegi
      841 pliilagkky gsgnsrdwaa kgpyllgvka vlaesyekih kdhligigia plqflpgesa
      901 dslglsgret fsltfpeels pgvilnikts tgkvfsvias fendveitly khggllnfva
      961 rkfs
//
LOCUS       XP_061014888             376 aa            linear   MAM 02-DEC-2023
DEFINITION  hydroxylysine kinase [Dama dama].
ACCESSION   XP_061014888
VERSION     XP_061014888.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158905.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..376
                     /product="hydroxylysine kinase"
                     /calculated_mol_wt=41989
     Region          21..350
                     /region_name="SrkA"
                     /note="Ser/Thr protein kinase RdoA involved in Cpx stress
                     response, MazF antagonist [Signal transduction
                     mechanisms]; COG2334"
                     /db_xref="CDD:441905"
     CDS             1..376
                     /gene="HYKK"
                     /coded_by="XM_061158905.1:412..1542"
                     /db_xref="GeneID:133067889"
ORIGIN      
        1 mssgdgqqsk altkpsfsev qasalvesvf glkvskiqpl psyddqnfhv ciartrvttd
       61 gpnecvlkis ntessktpdl ievqshiimf lraagfptas vcrtkgdnit slvsvdsgse
      121 vksylvrllt ylpgrpiaei pigpqllyei gklaakldkt lekfhhpkls slhrenfiwn
      181 lksvplleky lyalgqnrnr eiveqviqlf kdevmtslsh freciihgdl ndhniliess
      241 ksafgdavyq vsgildfddm sygyyvfeva itimymmies ktpiqvgghv lagfesvvpl
      301 tpvergalfl lvcsrfcqsl vlaayscqly peneeylmit aktgwkhlqq mfdmgrkave
      361 eiwfetaksy esgism
//
LOCUS       XP_061014889             376 aa            linear   MAM 02-DEC-2023
DEFINITION  hydroxylysine kinase [Dama dama].
ACCESSION   XP_061014889
VERSION     XP_061014889.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158906.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..376
                     /product="hydroxylysine kinase"
                     /calculated_mol_wt=41989
     Region          21..350
                     /region_name="SrkA"
                     /note="Ser/Thr protein kinase RdoA involved in Cpx stress
                     response, MazF antagonist [Signal transduction
                     mechanisms]; COG2334"
                     /db_xref="CDD:441905"
     CDS             1..376
                     /gene="HYKK"
                     /coded_by="XM_061158906.1:462..1592"
                     /db_xref="GeneID:133067889"
ORIGIN      
        1 mssgdgqqsk altkpsfsev qasalvesvf glkvskiqpl psyddqnfhv ciartrvttd
       61 gpnecvlkis ntessktpdl ievqshiimf lraagfptas vcrtkgdnit slvsvdsgse
      121 vksylvrllt ylpgrpiaei pigpqllyei gklaakldkt lekfhhpkls slhrenfiwn
      181 lksvplleky lyalgqnrnr eiveqviqlf kdevmtslsh freciihgdl ndhniliess
      241 ksafgdavyq vsgildfddm sygyyvfeva itimymmies ktpiqvgghv lagfesvvpl
      301 tpvergalfl lvcsrfcqsl vlaayscqly peneeylmit aktgwkhlqq mfdmgrkave
      361 eiwfetaksy esgism
//
LOCUS       XP_061014890             261 aa            linear   MAM 02-DEC-2023
DEFINITION  proteasome subunit alpha type-4 [Dama dama].
ACCESSION   XP_061014890
VERSION     XP_061014890.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158907.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..261
                     /product="proteasome subunit alpha type-4"
                     /calculated_mol_wt=29353
     Region          3..216
                     /region_name="proteasome_alpha_type_4"
                     /note="The 20S proteasome, multisubunit proteolytic
                     complex, is the central enzyme of nonlysosomal protein
                     degradation in both the cytosol and nucleus. It is
                     composed of 28 subunits arranged as four homoheptameric
                     rings that stack on top of one another forming...;
                     cd03752"
                     /db_xref="CDD:239721"
     Site            order(7..10,12..13,15..16,20,23,26..27,30,38,53,55..56,
                     80..82,84..85,116,119,122..123,126..130,148,153..154,156,
                     158..159,161)
                     /site_type="other"
                     /note="alpha subunit interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239721"
     Site            order(32,48,50,64,166)
                     /site_type="active"
                     /db_xref="CDD:239721"
     CDS             1..261
                     /gene="PSMA4"
                     /coded_by="XM_061158907.1:158..943"
                     /db_xref="GeneID:133067891"
ORIGIN      
        1 msrrydsrtt ifspegrlyq veyameaigh agtclgilan dgvllaaerr nihklldevf
       61 fsekiyklne dmacsvagit sdanvltnel rliaqryllq yqepipceql vtalcdikqa
      121 ytqfggkrpf gvsllyigwd khygfqlyqs dpsgnyggwk atcignnsaa avsmlkqdyk
      181 egemtlksal alaikvlnkt mdvsklsaek veiatltren gktvirvlkq keveqlikkh
      241 eeeeakaere kkekeqkekd k
//
LOCUS       XP_061014891             506 aa            linear   MAM 02-DEC-2023
DEFINITION  neuronal acetylcholine receptor subunit alpha-3 [Dama dama].
ACCESSION   XP_061014891
VERSION     XP_061014891.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158908.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..506
                     /product="neuronal acetylcholine receptor subunit alpha-3"
                     /calculated_mol_wt=57723
     Region          32..497
                     /region_name="LIC"
                     /note="Cation transporter family protein; cl42365"
                     /db_xref="CDD:455710"
     Region          36..242
                     /region_name="LGIC_ECD_nAChR_A3"
                     /note="extracellular domain of nicotinic acetylcholine
                     receptor subunit alpha 3 (CHRNA3); cd19016"
                     /db_xref="CDD:349817"
     Site            order(71,73,79..80,87,109,111,120..121,123,125..126,130,
                     132..133,137..139,141,151,153,155,159,181,241)
                     /site_type="other"
                     /note="pentamer interface [polypeptide binding]"
                     /db_xref="CDD:349817"
     Region          160..174
                     /region_name="Cys-loop"
                     /note="Cys-loop [structural motif]"
                     /db_xref="CDD:349817"
     CDS             1..506
                     /gene="CHRNA3"
                     /coded_by="XM_061158908.1:30..1550"
                     /db_xref="GeneID:133067892"
ORIGIN      
        1 mdaqprgvrs aklsplpavp lllllllpvv stsdaehrlf erlfedynei irpvanvsdp
       61 vviqfevsms qlvkvdevnq imetnlwlkq iwndyklkwn psdydgaefm rvpaqkiwkp
      121 divlynnavg dfqvddktka llkytgevtw ippaifkssc kidvtyfpfd yqnctmkfgs
      181 wsydkakidl vligssmnlk dywesgewai ikapgykhdi kyncceeiyq dityslyirr
      241 lplfytinli ipcllisflt vlvfylpsdc gekvtlcisv llsltvfllv itetipstsl
      301 vipligeyll ftmifvtlsi vitvfvlnvh yrtptthtmp twvktiflnl lprvmfmtrp
      361 asnesdtqrp rpfysaelsn lncfsriesk gckegypcqd glcgychhrr akisnfsanl
      421 trssssesvd avlslsalsp eikeaiqsvk yiaetmkaqn eakeiqddwk yvamvidrif
      481 lwvfilvcil gtaglflqpl mtrdda
//
LOCUS       XP_061014892             475 aa            linear   MAM 02-DEC-2023
DEFINITION  neuronal acetylcholine receptor subunit alpha-5 isoform X1 [Dama
            dama].
ACCESSION   XP_061014892
VERSION     XP_061014892.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158909.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..475
                     /product="neuronal acetylcholine receptor subunit alpha-5
                     isoform X1"
                     /calculated_mol_wt=54227
     Region          13..456
                     /region_name="LIC"
                     /note="Cation transporter family protein; cl42365"
                     /db_xref="CDD:455710"
     Region          52..258
                     /region_name="LGIC_ECD"
                     /note="extracellular domain (ECD) of Cys-loop
                     neurotransmitter-gated ion channels (also known as
                     ligand-gated ion channel (LGIC)); cl28912"
                     /db_xref="CDD:475126"
     Site            order(89,91,97..98,105,127,129,138..139,141,143..144,
                     154..156,158,168,170,172,176,198,256)
                     /site_type="other"
                     /note="pentamer interface [polypeptide binding]"
                     /db_xref="CDD:349819"
     CDS             1..475
                     /gene="CHRNA5"
                     /coded_by="XM_061158909.1:129..1556"
                     /db_xref="GeneID:133067893"
ORIGIN      
        1 maargwgrwv lglgplmlhf flpfqlaagr wdpegagggv rrglaepsvv akhednlfkd
       61 lfqdyerwvr pvehlndrik ikfglaisql vdvdeknqlm ttnvwlkqew idvklrwnpd
      121 dyggiklirv psnslwipdi vlfdnadgrf egastkavvr hdgtvtwapp anykssctid
      181 vtffpfdlqn csmkfgswty dgsqvdiile dqdvdkrdff dngeweivsa tgskgnrtds
      241 gcwypyitys fvikrlplfy tlfliipcig lsfltvlvfy lpsnegekic lctsvlvslt
      301 vfllvieeii pssskvipli geylvftmif vtlsimvtvf ainihhrsss thnamapwvr
      361 kiflhklpkl lcmrshvdry fsqkeearss rgpkssrntl eaaldsiryi trhvmkendv
      421 revvedwkfi aqvldrmflw tfllvsvvgs lglfvpviyk waniivpihi gnenk
//
LOCUS       XP_061014893             376 aa            linear   MAM 02-DEC-2023
DEFINITION  neuronal acetylcholine receptor subunit alpha-5 isoform X2 [Dama
            dama].
ACCESSION   XP_061014893
VERSION     XP_061014893.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158910.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..376
                     /product="neuronal acetylcholine receptor subunit alpha-5
                     isoform X2"
                     /calculated_mol_wt=42977
     Region          1..357
                     /region_name="LIC"
                     /note="Cation transporter family protein; cl42365"
                     /db_xref="CDD:455710"
     Region          <1..159
                     /region_name="LGIC_ECD"
                     /note="extracellular domain (ECD) of Cys-loop
                     neurotransmitter-gated ion channels (also known as
                     ligand-gated ion channel (LGIC)); cl28912"
                     /db_xref="CDD:475126"
     Site            order(6,28,30,39..40,42,44..45,55..57,59,69,71,73,77,99,
                     157)
                     /site_type="other"
                     /note="pentamer interface [polypeptide binding]"
                     /db_xref="CDD:349819"
     CDS             1..376
                     /gene="CHRNA5"
                     /coded_by="XM_061158910.1:189..1319"
                     /db_xref="GeneID:133067893"
ORIGIN      
        1 mttnvwlkqe widvklrwnp ddyggiklir vpsnslwipd ivlfdnadgr fegastkavv
       61 rhdgtvtwap panyksscti dvtffpfdlq ncsmkfgswt ydgsqvdiil edqdvdkrdf
      121 fdngeweivs atgskgnrtd sgcwypyity sfvikrlplf ytlfliipci glsfltvlvf
      181 ylpsnegeki clctsvlvsl tvfllvieei ipssskvipl igeylvftmi fvtlsimvtv
      241 fainihhrss sthnamapwv rkiflhklpk llcmrshvdr yfsqkeears srgpkssrnt
      301 leaaldsiry itrhvmkend vrevvedwkf iaqvldrmfl wtfllvsvvg slglfvpviy
      361 kwaniivpih ignenk
//
LOCUS       XP_061014894             377 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin-conjugating enzyme E2 Q2 isoform X1 [Dama dama].
ACCESSION   XP_061014894
VERSION     XP_061014894.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158911.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..377
                     /product="ubiquitin-conjugating enzyme E2 Q2 isoform X1"
                     /calculated_mol_wt=42758
     Region          209..364
                     /region_name="UBCc_UBE2Q"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain of ubiquitin-conjugating enzyme E2 Q1, Q2, and
                     related proteins; cd23802"
                     /db_xref="CDD:467422"
     CDS             1..377
                     /gene="UBE2Q2"
                     /coded_by="XM_061158911.1:99..1232"
                     /db_xref="GeneID:133067894"
ORIGIN      
        1 msvsglkael kflasifdkn herfrivswk ldelhcqflv pppappgsph sppppltlhc
       61 nitesypsss piwfvdsddp nltsvlerle dtknnnslrq qlkwlicels rlynlpkhld
      121 vemldqplpt gqngtteevt seeeeeeema ediedldhye mkeeepisgk ksedegieke
      181 nlailekirk tqrqdhlnga vsgsvqasdr lmkelrdiyr sqsyktgiys velindslyd
      241 whvklqkvdp dsplhsdlqi lkekegieyi llnfsfkdnf pfdppfvrvv lpvlsggyvl
      301 gggalcmell tkqgwssays iesvimqina tlvkgkarvq fganknqynl araqqsynsi
      361 vqihekngwy tppkedg
//
LOCUS       XP_061014895             342 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin-conjugating enzyme E2 Q2 isoform X2 [Dama dama].
ACCESSION   XP_061014895
VERSION     XP_061014895.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158912.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..342
                     /product="ubiquitin-conjugating enzyme E2 Q2 isoform X2"
                     /calculated_mol_wt=38586
     Region          174..329
                     /region_name="UBCc_UBE2Q"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain of ubiquitin-conjugating enzyme E2 Q1, Q2, and
                     related proteins; cd23802"
                     /db_xref="CDD:467422"
     CDS             1..342
                     /gene="UBE2Q2"
                     /coded_by="XM_061158912.1:102..1130"
                     /db_xref="GeneID:133067894"
ORIGIN      
        1 msvsglkael kflasifdkn herfrivswk ldelhcqflv pppappgsph sppppltlhc
       61 nitesypsss piwfvdsddp nltsvlerle dtknnnsngt teevtseeee eeemaedied
      121 ldhyemkeee pisgkksede giekenlail ekirktqrqd hlngavsgsv qasdrlmkel
      181 rdiyrsqsyk tgiysvelin dslydwhvkl qkvdpdsplh sdlqilkeke gieyillnfs
      241 fkdnfpfdpp fvrvvlpvls ggyvlgggal cmelltkqgw ssaysiesvi mqinatlvkg
      301 karvqfgank nqynlaraqq synsivqihe kngwytppke dg
//
LOCUS       XP_061014896             539 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 266 [Dama dama].
ACCESSION   XP_061014896
VERSION     XP_061014896.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158913.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..539
                     /product="transmembrane protein 266"
                     /calculated_mol_wt=58793
     CDS             1..539
                     /gene="TMEM266"
                     /coded_by="XM_061158913.1:196..1815"
                     /db_xref="GeneID:133067895"
ORIGIN      
        1 malvasfnmt npqpatergl seveiisqqv deetksiapv qlvnfayrdl plaavdlsta
       61 gsqllsnlde dyqregstwl kpccgkraav wqvfllsasv nsflvacvil vvilltlell
      121 idikllqfss afqfagvihw islvilsvff setvlrivvl giwdyienki evfdgaviil
      181 slapmvastv angprspwda isliimfriw rvkrvidayv lpvkvememv iqqyekakai
      241 qdeqlerltq icqeqgfeir qlrahlaqqd ldlaaereaa lqaphvlsqp rsrykvveag
      301 twaeetaaes vveelqpaqe atvkddmnsy isqyyngpss dsgvpepavc vvttaaidih
      361 qpnvssdlfs idvppklgsd gtgasasses atrstrssgt raqsdssqtl gsstdcsaar
      421 eepssgprps apppppppsq qhaaeatvqd llsplsedpc psrraldsap laqsspegsa
      481 qpspelehrv slfnqknreg ftvfqikpvi hfqpaapvle ekfrsleske qklhrvpea
//
LOCUS       XP_061014897             404 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box only protein 22 [Dama dama].
ACCESSION   XP_061014897
VERSION     XP_061014897.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158914.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..404
                     /product="F-box only protein 22"
                     /calculated_mol_wt=44614
     Region          24..71
                     /region_name="F-box_FBXO22"
                     /note="F-box domain found in F-box only protein 22
                     (FBXO22) and similar proteins; cd22097"
                     /db_xref="CDD:438869"
     Site            order(27,30,33..34,37..38,42,44..45,49..51,53)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438869"
     Region          <299..365
                     /region_name="FIST"
                     /note="Small ligand-binding sensory domain FIST [Signal
                     transduction mechanisms]; COG4398"
                     /db_xref="CDD:443524"
     CDS             1..404
                     /gene="FBXO22"
                     /coded_by="XM_061158914.1:80..1294"
                     /db_xref="GeneID:133067896"
ORIGIN      
        1 mervggggdc cgsssadprs tfvlsnlaev vervftflpa kallrvagvc rlwrecvrrv
       61 lrthrnvtwi salsadpchl aqhclvrvva eelenvhilp qtvlymadse nfinleecrg
      121 hkrarkrttm eaafaleklf pkqcqvlgiv tpgivvtpig srsnrpqeie igesgfallf
      181 pqiegikikp fhfikdpkkl tlerhqltev glldnpelrv vlvfgyncck vgasnylqrv
      241 vstfsdmnvi laggqvdnla sltseknpld idatgvvgls fsghqvqgat vllnedvnde
      301 ktvdaamqrl kaanipeqnt igfmfacvgr gsqyyrakkn veadafrkff psvplfgffg
      361 ngeigcdriv tgnfilkkcn efnyndlfhs yttimalihl gssk
//
LOCUS       XP_061014898             114 aa            linear   MAM 02-DEC-2023
DEFINITION  pro-neuregulin-4, membrane-bound isoform [Dama dama].
ACCESSION   XP_061014898
VERSION     XP_061014898.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158915.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..114
                     /product="pro-neuregulin-4, membrane-bound isoform"
                     /calculated_mol_wt=12455
     Region          <9..85
                     /region_name="PHA03099"
                     /note="epidermal growth factor-like protein (EGF-like
                     protein); Provisional"
                     /db_xref="CDD:165381"
     CDS             1..114
                     /gene="NRG4"
                     /coded_by="XM_061158915.1:171..515"
                     /db_xref="GeneID:133067897"
ORIGIN      
        1 mttdheepcg pshrsfclng glcyviptip spfcrcieny tgarceevfl psssiqtksd
       61 lfaafvaliv llgtlilgal yflcrkghlq rassvqydin lvetsstsvh hrfs
//
LOCUS       XP_061014899             333 aa            linear   MAM 02-DEC-2023
DEFINITION  electron transfer flavoprotein subunit alpha, mitochondrial [Dama
            dama].
ACCESSION   XP_061014899
VERSION     XP_061014899.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158916.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..333
                     /product="electron transfer flavoprotein subunit alpha,
                     mitochondrial"
                     /calculated_mol_wt=34902
     Region          21..332
                     /region_name="FixB"
                     /note="Electron transfer flavoprotein, alpha subunit FixB
                     [Energy production and conversion]; COG2025"
                     /db_xref="CDD:441628"
     CDS             1..333
                     /gene="ETFA"
                     /coded_by="XM_061158916.1:123..1124"
                     /db_xref="GeneID:133067900"
ORIGIN      
        1 mfravapgql rratsllrfq stlviaehan dtlapitlnt itaakrlgge vsclvagtkc
       61 dkvaqdlckv agvakvlvaq hdaykgllpe eltplilatq kqfnhthica gasafgknll
      121 priaakldva pisdiiaiks pdtfvrtiya gnavctvkcd ekvkvfsvrg tsfeaaatsg
      181 gsassekass ispvgisewl dqkltksdrp eltgakvvvs ggrglksgen fkllydladq
      241 lhaavgasra avdagfvpnd lqvgqtgkiv apelyiavgi sgaiqhlagm kdsktivain
      301 kdpeapifqv adygivadlf kvvpemtell kkk
//
LOCUS       XP_061014900            1457 aa            linear   MAM 02-DEC-2023
DEFINITION  S phase cyclin A-associated protein in the endoplasmic reticulum
            isoform X1 [Dama dama].
ACCESSION   XP_061014900
VERSION     XP_061014900.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158917.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1457
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1457
                     /product="S phase cyclin A-associated protein in the
                     endoplasmic reticulum isoform X1"
                     /calculated_mol_wt=163786
     Region          89..186
                     /region_name="SCAPER_N"
                     /note="S phase cyclin A-associated protein in the
                     endoplasmic reticulum; pfam16501"
                     /db_xref="CDD:406813"
     Region          <387..717
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     Region          <672..799
                     /region_name="DUF4670"
                     /note="Domain of unknown function (DUF4670); pfam15709"
                     /db_xref="CDD:464815"
     Region          796..828
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     CDS             1..1457
                     /gene="SCAPER"
                     /coded_by="XM_061158917.1:127..4500"
                     /db_xref="GeneID:133067901"
ORIGIN      
        1 mmasfqrsns hdkvrrivae egrtarnlia wsvpleskdd dgkskcqtgg kskrtiqgth
       61 ktakqnttvd ckmtssttgd khfdksptkt rhprkvdlra rywaflfdnl rravdeiyvt
      121 cesdqsvvec kevlmmldny vrdfkalidw iqlqeklekt daqsrptsla wevkkmspgr
      181 hvipspstdr invtsnarrs lnfggssgtg aaprlaptgv swadkvkahh tgsaaasdva
      241 paqscppaav qkpsrrnerk daegwetvqr grpvrsrsta vmpkaslpte alrskddsdk
      301 envhllpees vqksefvgde psntiesrpk dpvhscdhpl aektqftvst lddvknsgss
      361 flpdnsvpts eipavhidte cvsviqqadt pslqasedkf saekariese mdpsdisnvs
      421 aanlsmaevl akkeeladrl ekaneeaias aiaeeeqltr eieaeenndi nietdndsdf
      481 sasmgsgsvs fcgmnwndvl adyeareswr qntswgdive eeparppghg ihmheklssp
      541 srkrtiaesk kkheekqmka qqlreklreq ktlklqklle rekevrkwke glldqrrrmm
      601 eekllhaefk revqlqaivk kaqeeeakvn eiafintlea qnkrhdvlsk lkeyeqrlne
      661 lqeerqrrqe ekqardeavq erkraleaer qarveellmk rkeqearieq qrqekekare
      721 daarerardr eerlaaltaa qqeameelqk kiqlkhdesi rrhmeqieqr kekaaelssg
      781 rhantdyapk ltpyerkkqc slcnvlisse vylfshikgk khqqavrens siqgrelsde
      841 evlrpckyle knilgygnks leavpflrtv knnilnstpi snwlldlstc vftehlslkk
      901 yvidivvest appeplkdge erqknkkkak kikarmnfra keyeslleak nsgsdspyka
      961 klqrlakdll kqlqvqdsgs wasnkvsald rtlgevaril ekenvadqia fqaaggltal
     1021 ehilqvvvpv tnvnpvsrip pkslcnainv ynltcnncse nctdvlfsnk itflmdllih
     1081 qltvyvpden nailgrntnk qvfeglttgl lkvsaavfgc lianrpdgns qpttpkistq
     1141 emkskpsqgd afnsrvqdli syvvniglid klcgcflsvq gpvdenpkma tflqhaagll
     1201 qgmctlcfav tgrsysifdd nrqdptglta alqatdlagv lhmlycilfh gtisdpstas
     1261 pkesyaqntv qvaiqslrff nsfaalnlpa fqsivgaegl slafrhiass llghcshvsc
     1321 esllhevivc vgyftvnhpd nqvivqsgrh ptvlqklcql pfqyfsdprl ikvlfpslia
     1381 acynnlqnki ileqemscvl latfiqdfaq tsgqadnqsy qpkgkclgsq dylelanrfp
     1441 qqaweearqf flkkekk
//
LOCUS       XP_061014901            1451 aa            linear   MAM 02-DEC-2023
DEFINITION  S phase cyclin A-associated protein in the endoplasmic reticulum
            isoform X2 [Dama dama].
ACCESSION   XP_061014901
VERSION     XP_061014901.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158918.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1451
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1451
                     /product="S phase cyclin A-associated protein in the
                     endoplasmic reticulum isoform X2"
                     /calculated_mol_wt=163230
     Region          89..186
                     /region_name="SCAPER_N"
                     /note="S phase cyclin A-associated protein in the
                     endoplasmic reticulum; pfam16501"
                     /db_xref="CDD:406813"
     Region          <387..711
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     Region          <666..793
                     /region_name="DUF4670"
                     /note="Domain of unknown function (DUF4670); pfam15709"
                     /db_xref="CDD:464815"
     Region          790..822
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     CDS             1..1451
                     /gene="SCAPER"
                     /coded_by="XM_061158918.1:127..4482"
                     /db_xref="GeneID:133067901"
ORIGIN      
        1 mmasfqrsns hdkvrrivae egrtarnlia wsvpleskdd dgkskcqtgg kskrtiqgth
       61 ktakqnttvd ckmtssttgd khfdksptkt rhprkvdlra rywaflfdnl rravdeiyvt
      121 cesdqsvvec kevlmmldny vrdfkalidw iqlqeklekt daqsrptsla wevkkmspgr
      181 hvipspstdr invtsnarrs lnfggssgtg aaprlaptgv swadkvkahh tgsaaasdva
      241 paqscppaav qkpsrrnerk daegwetvqr grpvrsrsta vmpkaslpte alrskddsdk
      301 envhllpees vqksefvgde psntiesrpk dpvhscdhpl aektqftvst lddvknsgss
      361 flpdnsvpts eipavhidte cvsviqqadt pslqasedkf saekariese mdpsdisnsm
      421 aevlakkeel adrlekanee aiasaiaeee qltreieaee nndinietdn dsdfsasmgs
      481 gsvsfcgmnw ndvladyear eswrqntswg diveeeparp pghgihmhek lsspsrkrti
      541 aeskkkheek qmkaqqlrek lreqktlklq kllerekevr kwkeglldqr rrmmeekllh
      601 aefkrevqlq aivkkaqeee akvneiafin tleaqnkrhd vlsklkeyeq rlnelqeerq
      661 rrqeekqard eavqerkral eaerqarvee llmkrkeqea rieqqrqeke karedaarer
      721 ardreerlaa ltaaqqeame elqkkiqlkh desirrhmeq ieqrkekaae lssgrhantd
      781 yapkltpyer kkqcslcnvl issevylfsh ikgkkhqqav renssiqgre lsdeevlrpc
      841 kyleknilgy gnksleavpf lrtvknniln stpisnwlld lstcvftehl slkkyvidiv
      901 vestappepl kdgeerqknk kkakkikarm nfrakeyesl leaknsgsds pykaklqrla
      961 kdllkqlqvq dsgswasnkv saldrtlgev arilekenva dqiafqaagg ltalehilqv
     1021 vvpvtnvnpv srippkslcn ainvynltcn ncsenctdvl fsnkitflmd llihqltvyv
     1081 pdennailgr ntnkqvfegl ttgllkvsaa vfgclianrp dgnsqpttpk istqemkskp
     1141 sqgdafnsrv qdlisyvvni glidklcgcf lsvqgpvden pkmatflqha agllqgmctl
     1201 cfavtgrsys ifddnrqdpt gltaalqatd lagvlhmlyc ilfhgtisdp staspkesya
     1261 qntvqvaiqs lrffnsfaal nlpafqsivg aeglslafrh iassllghcs hvscesllhe
     1321 vivcvgyftv nhpdnqvivq sgrhptvlqk lcqlpfqyfs dprlikvlfp sliaacynnl
     1381 qnkiileqem scvllatfiq dfaqtsgqad nqsyqpkgkc lgsqdylela nrfpqqawee
     1441 arqfflkkek k
//
LOCUS       XP_061014902            1406 aa            linear   MAM 02-DEC-2023
DEFINITION  S phase cyclin A-associated protein in the endoplasmic reticulum
            isoform X3 [Dama dama].
ACCESSION   XP_061014902
VERSION     XP_061014902.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158919.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1406
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1406
                     /product="S phase cyclin A-associated protein in the
                     endoplasmic reticulum isoform X3"
                     /calculated_mol_wt=158005
     Region          89..186
                     /region_name="SCAPER_N"
                     /note="S phase cyclin A-associated protein in the
                     endoplasmic reticulum; pfam16501"
                     /db_xref="CDD:406813"
     Region          <393..935
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          <543..>777
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..1406
                     /gene="SCAPER"
                     /coded_by="XM_061158919.1:127..4347"
                     /db_xref="GeneID:133067901"
ORIGIN      
        1 mmasfqrsns hdkvrrivae egrtarnlia wsvpleskdd dgkskcqtgg kskrtiqgth
       61 ktakqnttvd ckmtssttgd khfdksptkt rhprkvdlra rywaflfdnl rravdeiyvt
      121 cesdqsvvec kevlmmldny vrdfkalidw iqlqeklekt daqsrptsla wevkkmspgr
      181 hvipspstdr invtsnarrs lnfggssgtg aaprlaptgv swadkvkahh tgsaaasdva
      241 paqscppaav qkpsrrnerk daegwetvqr grpvrsrsta vmpkaslpte alrskddsdk
      301 envhllpees vqksefvgde psntiesrpk dpvhscdhpl aektqftvst lddvknsgss
      361 flpdnsvpts eipavhidte cvsviqqadt pslqasedkf saekariese mdpsdisnvs
      421 aanlsmaevl akkeeladrl ekaneeaias aiaeeeqltr eieaeenndi nietdndsdf
      481 sasmgsgsvs fcgmnwndvl adyeareswr qntswgdive eeparppghg ihmheklssp
      541 srkrtiaesk kkheekqmka qqlreklreq ktlklqklle rekevrkwke glldqrrrmm
      601 eekllhaefk revqlqaivk kaqeeeakvn eiafintlea qnkrhdvlsk lkeyeqrlne
      661 lqeerqrrqe ekqardeavq erkraleaer qarveellmk rkeqearieq qrqekekare
      721 daarerardr eerlaaltaa qqeameelqk kiqlkhdesi rrhmeqieqr kekaaelssg
      781 rhantdyapk ltpyerkkqc slcnvlisse vylfshikgk khqqavrens siqgrelsde
      841 evehlslkky vidivvesta ppeplkdgee rqknkkkakk ikarmnfrak eyeslleakn
      901 sgsdspykak lqrlakdllk qlqvqdsgsw asnkvsaldr tlgevarile kenvadqiaf
      961 qaaggltale hilqvvvpvt nvnpvsripp kslcnainvy nltcnncsen ctdvlfsnki
     1021 tflmdllihq ltvyvpdenn ailgrntnkq vfeglttgll kvsaavfgcl ianrpdgnsq
     1081 pttpkistqe mkskpsqgda fnsrvqdlis yvvniglidk lcgcflsvqg pvdenpkmat
     1141 flqhaagllq gmctlcfavt grsysifddn rqdptgltaa lqatdlagvl hmlycilfhg
     1201 tisdpstasp kesyaqntvq vaiqslrffn sfaalnlpaf qsivgaegls lafrhiassl
     1261 lghcshvsce sllhevivcv gyftvnhpdn qvivqsgrhp tvlqklcqlp fqyfsdprli
     1321 kvlfpsliaa cynnlqnkii leqemscvll atfiqdfaqt sgqadnqsyq pkgkclgsqd
     1381 ylelanrfpq qaweearqff lkkekk
//
LOCUS       XP_061014904            1400 aa            linear   MAM 02-DEC-2023
DEFINITION  S phase cyclin A-associated protein in the endoplasmic reticulum
            isoform X4 [Dama dama].
ACCESSION   XP_061014904
VERSION     XP_061014904.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158921.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1400
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1400
                     /product="S phase cyclin A-associated protein in the
                     endoplasmic reticulum isoform X4"
                     /calculated_mol_wt=157450
     Region          89..186
                     /region_name="SCAPER_N"
                     /note="S phase cyclin A-associated protein in the
                     endoplasmic reticulum; pfam16501"
                     /db_xref="CDD:406813"
     Region          <393..929
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          <537..>771
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..1400
                     /gene="SCAPER"
                     /coded_by="XM_061158921.1:127..4329"
                     /db_xref="GeneID:133067901"
ORIGIN      
        1 mmasfqrsns hdkvrrivae egrtarnlia wsvpleskdd dgkskcqtgg kskrtiqgth
       61 ktakqnttvd ckmtssttgd khfdksptkt rhprkvdlra rywaflfdnl rravdeiyvt
      121 cesdqsvvec kevlmmldny vrdfkalidw iqlqeklekt daqsrptsla wevkkmspgr
      181 hvipspstdr invtsnarrs lnfggssgtg aaprlaptgv swadkvkahh tgsaaasdva
      241 paqscppaav qkpsrrnerk daegwetvqr grpvrsrsta vmpkaslpte alrskddsdk
      301 envhllpees vqksefvgde psntiesrpk dpvhscdhpl aektqftvst lddvknsgss
      361 flpdnsvpts eipavhidte cvsviqqadt pslqasedkf saekariese mdpsdisnsm
      421 aevlakkeel adrlekanee aiasaiaeee qltreieaee nndinietdn dsdfsasmgs
      481 gsvsfcgmnw ndvladyear eswrqntswg diveeeparp pghgihmhek lsspsrkrti
      541 aeskkkheek qmkaqqlrek lreqktlklq kllerekevr kwkeglldqr rrmmeekllh
      601 aefkrevqlq aivkkaqeee akvneiafin tleaqnkrhd vlsklkeyeq rlnelqeerq
      661 rrqeekqard eavqerkral eaerqarvee llmkrkeqea rieqqrqeke karedaarer
      721 ardreerlaa ltaaqqeame elqkkiqlkh desirrhmeq ieqrkekaae lssgrhantd
      781 yapkltpyer kkqcslcnvl issevylfsh ikgkkhqqav renssiqgre lsdeevehls
      841 lkkyvidivv estappeplk dgeerqknkk kakkikarmn frakeyesll eaknsgsdsp
      901 ykaklqrlak dllkqlqvqd sgswasnkvs aldrtlgeva rilekenvad qiafqaaggl
      961 talehilqvv vpvtnvnpvs rippkslcna invynltcnn csenctdvlf snkitflmdl
     1021 lihqltvyvp dennailgrn tnkqvfeglt tgllkvsaav fgclianrpd gnsqpttpki
     1081 stqemkskps qgdafnsrvq dlisyvvnig lidklcgcfl svqgpvdenp kmatflqhaa
     1141 gllqgmctlc favtgrsysi fddnrqdptg ltaalqatdl agvlhmlyci lfhgtisdps
     1201 taspkesyaq ntvqvaiqsl rffnsfaaln lpafqsivga eglslafrhi assllghcsh
     1261 vscesllhev ivcvgyftvn hpdnqvivqs grhptvlqkl cqlpfqyfsd prlikvlfps
     1321 liaacynnlq nkiileqems cvllatfiqd faqtsgqadn qsyqpkgkcl gsqdylelan
     1381 rfpqqaweea rqfflkkekk
//
LOCUS       XP_061014905            1215 aa            linear   MAM 02-DEC-2023
DEFINITION  S phase cyclin A-associated protein in the endoplasmic reticulum
            isoform X5 [Dama dama].
ACCESSION   XP_061014905
VERSION     XP_061014905.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158922.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1215
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1215
                     /product="S phase cyclin A-associated protein in the
                     endoplasmic reticulum isoform X5"
                     /calculated_mol_wt=136739
     Region          89..186
                     /region_name="SCAPER_N"
                     /note="S phase cyclin A-associated protein in the
                     endoplasmic reticulum; pfam16501"
                     /db_xref="CDD:406813"
     Region          <543..>777
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          796..828
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     Region          800..822
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     CDS             1..1215
                     /gene="SCAPER"
                     /coded_by="XM_061158922.1:127..3774"
                     /db_xref="GeneID:133067901"
ORIGIN      
        1 mmasfqrsns hdkvrrivae egrtarnlia wsvpleskdd dgkskcqtgg kskrtiqgth
       61 ktakqnttvd ckmtssttgd khfdksptkt rhprkvdlra rywaflfdnl rravdeiyvt
      121 cesdqsvvec kevlmmldny vrdfkalidw iqlqeklekt daqsrptsla wevkkmspgr
      181 hvipspstdr invtsnarrs lnfggssgtg aaprlaptgv swadkvkahh tgsaaasdva
      241 paqscppaav qkpsrrnerk daegwetvqr grpvrsrsta vmpkaslpte alrskddsdk
      301 envhllpees vqksefvgde psntiesrpk dpvhscdhpl aektqftvst lddvknsgss
      361 flpdnsvpts eipavhidte cvsviqqadt pslqasedkf saekariese mdpsdisnvs
      421 aanlsmaevl akkeeladrl ekaneeaias aiaeeeqltr eieaeenndi nietdndsdf
      481 sasmgsgsvs fcgmnwndvl adyeareswr qntswgdive eeparppghg ihmheklssp
      541 srkrtiaesk kkheekqmka qqlreklreq ktlklqklle rekevrkwke glldqrrrmm
      601 eekllhaefk revqlqaivk kaqeeeakvn eiafintlea qnkrhdvlsk lkeyeqrlne
      661 lqeerqrrqe ekqardeavq erkraleaer qarveellmk rkeqearieq qrqekekare
      721 daarerardr eerlaaltaa qqeameelqk kiqlkhdesi rrhmeqieqr kekaaelssg
      781 rhantdyapk ltpyerkkqc slcnvlisse vylfshikgk khqqavrens siqgrelsde
      841 evlrpckyle knilgygnks leavpflrtv knnilnstpi snwlldlstc vftehlslkk
      901 yvidivvest appeplkdge erqknkkkak kikarmnfra keyeslleak nsgsdspyka
      961 klqrlakdll kqlqvqdsgs wasnkvsald rtlgevaril ekenvadqia fqaaggltal
     1021 ehilqvvvpv tnvnpvsrip pkslcnainv ynltcnncse nctdvlfsnk itflmdllih
     1081 qltvyvpden nailgrntnk qvfeglttgl lkvsaavfgc lianrpdgns qpttpkistq
     1141 emkskpsqgd afnsrvqdli syvvniglid klcgcflsvq gpvdenpkma tflqhaagll
     1201 qgmctlcfav tgsls
//
LOCUS       XP_061014906             317 aa            linear   MAM 02-DEC-2023
DEFINITION  reticulocalbin-2 isoform X1 [Dama dama].
ACCESSION   XP_061014906
VERSION     XP_061014906.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158923.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..317
                     /product="reticulocalbin-2 isoform X1"
                     /calculated_mol_wt=36906
     Region          29..296
                     /region_name="EFh_CREC_RCN2"
                     /note="EF-hand, calcium binding motif, found in
                     reticulocalbin-2 (RCN2); cd16224"
                     /db_xref="CDD:320022"
     Region          29..59
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320022"
     Region          65..94
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320022"
     Region          101..130
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320022"
     Region          153..182
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320022"
     Region          190..219
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320022"
     Region          231..260
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320022"
     Region          267..296
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320022"
     CDS             1..317
                     /gene="RCN2"
                     /coded_by="XM_061158923.1:180..1133"
                     /db_xref="GeneID:133067902"
ORIGIN      
        1 mqldlrpatl gllllcaaaa gageaeelhy rqgehradyd reallggqee vdeyvklspe
       61 eqhkrlksii kkidldsdgf lteselsswi qmsfkhyamq eakqqfieyd knndgsvswd
      121 eyniqmydrv idfdentald daeeesfrql hlkdkkrfek anqdsgpgln leefiafehp
      181 eevdymtefv iqealeehdk ngdgfvslee flgdyrrdpt anedpewilv ekdrfmndyd
      241 rdadgrldpq ellswvvpnn qgiaqeealh lidemdlnsd rklseeeile nqdlfltsea
      301 tdygrqlhde yfyhdel
//
LOCUS       XP_061014907             313 aa            linear   MAM 02-DEC-2023
DEFINITION  reticulocalbin-2 isoform X2 [Dama dama].
ACCESSION   XP_061014907
VERSION     XP_061014907.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158924.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..313
                     /product="reticulocalbin-2 isoform X2"
                     /calculated_mol_wt=36415
     Region          29..292
                     /region_name="EFh_CREC_RCN2"
                     /note="EF-hand, calcium binding motif, found in
                     reticulocalbin-2 (RCN2); cd16224"
                     /db_xref="CDD:320022"
     Region          29..59
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320022"
     Region          65..94
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320022"
     Region          101..130
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320022"
     Region          150..178
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320022"
     Region          186..215
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320022"
     Region          227..256
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320022"
     Region          263..292
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320022"
     CDS             1..313
                     /gene="RCN2"
                     /coded_by="XM_061158924.1:180..1121"
                     /db_xref="GeneID:133067902"
ORIGIN      
        1 mqldlrpatl gllllcaaaa gageaeelhy rqgehradyd reallggqee vdeyvklspe
       61 eqhkrlksii kkidldsdgf lteselsswi qmsfkhyamq eakqqfieyd knndgsvswd
      121 eyniqmydrv idfdentald daeeesfrqd kkrfekanqd sgpglnleef iafehpeevd
      181 ymtefviqea leehdkngdg fvsleeflgd yrrdptaned pewilvekdr fmndydrdad
      241 grldpqells wvvpnnqgia qeealhlide mdlnsdrkls eeeilenqdl fltseatdyg
      301 rqlhdeyfyh del
//
LOCUS       XP_061014908             417 aa            linear   MAM 02-DEC-2023
DEFINITION  proline-serine-threonine phosphatase-interacting protein 1 isoform
            X1 [Dama dama].
ACCESSION   XP_061014908
VERSION     XP_061014908.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158925.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..417
                     /product="proline-serine-threonine phosphatase-interacting
                     protein 1 isoform X1"
                     /calculated_mol_wt=47486
     Region          17..258
                     /region_name="BAR"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain, a
                     dimerization module that binds membranes and detects
                     membrane curvature; cl12013"
                     /db_xref="CDD:472257"
     Site            order(22,25..26,30,32..33,36..37,39..40,50..51,53..54,
                     57..58,60..61,64,87,90..91,214,217..218,220,222,225..226,
                     228..229,232..233,236..237,239..240,243..244,246..247)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153355"
     Region          364..416
                     /region_name="SH3_PSTPIP1"
                     /note="Src homology 3 domain of Proline-Serine-Threonine
                     Phosphatase-Interacting Protein 1; cd11824"
                     /db_xref="CDD:212758"
     Site            order(369,371,374,378,396..397,410,412..413)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212758"
     CDS             1..417
                     /gene="PSTPIP1"
                     /coded_by="XM_061158925.1:13..1266"
                     /db_xref="GeneID:133067903"
ORIGIN      
        1 mmgdglwkwk rkqcrdftah tgyevllqrl ldgrkmckdv eellrqraqa eerygkelvq
       61 iarkaggqte inslrasfds lkqqmenvgs shiqlalalr eelrsleefr erqkeqrkky
      121 eavmdrvqks klslhkkame skktyeqkcr daddaeqafe ristngqqkq veksqnkakq
      181 ckdsameaer vyrqnieqle rvrseweqeh ratceafqlq efdrltilrn slwvhcnqls
      241 mqcvkddely eevrvtlegc svdadidgfi qakstgtepp apvpyqnyyd revapltssp
      301 gvqpscgmik rfsgllhgsp kttlsaasaa stetltpipd rnesvyaaia vqeapgpptk
      361 pgqdyralyd ytaqnsdeln isagdilevi legedgwwtv qrngqrgfvp gsyleki
//
LOCUS       XP_061014909             416 aa            linear   MAM 02-DEC-2023
DEFINITION  proline-serine-threonine phosphatase-interacting protein 1 isoform
            X2 [Dama dama].
ACCESSION   XP_061014909
VERSION     XP_061014909.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158926.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..416
                     /product="proline-serine-threonine phosphatase-interacting
                     protein 1 isoform X2"
                     /calculated_mol_wt=47363
     Region          16..257
                     /region_name="BAR"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain, a
                     dimerization module that binds membranes and detects
                     membrane curvature; cl12013"
                     /db_xref="CDD:472257"
     Site            order(21,24..25,29,31..32,35..36,38..39,49..50,52..53,
                     56..57,59..60,63,86,89..90,213,216..217,219,221,224..225,
                     227..228,231..232,235..236,238..239,242..243,245..246)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153355"
     Region          363..415
                     /region_name="SH3_PSTPIP1"
                     /note="Src homology 3 domain of Proline-Serine-Threonine
                     Phosphatase-Interacting Protein 1; cd11824"
                     /db_xref="CDD:212758"
     Site            order(368,370,373,377,395..396,409,411..412)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212758"
     CDS             1..416
                     /gene="PSTPIP1"
                     /coded_by="XM_061158926.1:627..1877"
                     /db_xref="GeneID:133067903"
ORIGIN      
        1 mmpqlqfkda fwcrdftaht gyevllqrll dgrkmckdve ellrqraqae erygkelvqi
       61 arkaggqtei nslrasfdsl kqqmenvgss hiqlalalre elrsleefre rqkeqrkkye
      121 avmdrvqksk lslhkkames kktyeqkcrd addaeqafer istngqqkqv eksqnkakqc
      181 kdsameaerv yrqnieqler vrseweqehr atceafqlqe fdrltilrns lwvhcnqlsm
      241 qcvkddelye evrvtlegcs vdadidgfiq akstgteppa pvpyqnyydr evapltsspg
      301 vqpscgmikr fsgllhgspk ttlsaasaas tetltpipdr nesvyaaiav qeapgpptkp
      361 gqdyralydy taqnsdelni sagdilevil egedgwwtvq rngqrgfvpg syleki
//
LOCUS       XP_061014910             411 aa            linear   MAM 02-DEC-2023
DEFINITION  proline-serine-threonine phosphatase-interacting protein 1 isoform
            X3 [Dama dama].
ACCESSION   XP_061014910
VERSION     XP_061014910.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158927.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..411
                     /product="proline-serine-threonine phosphatase-interacting
                     protein 1 isoform X3"
                     /calculated_mol_wt=46638
     Region          11..252
                     /region_name="BAR"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain, a
                     dimerization module that binds membranes and detects
                     membrane curvature; cl12013"
                     /db_xref="CDD:472257"
     Site            order(16,19..20,24,26..27,30..31,33..34,44..45,47..48,
                     51..52,54..55,58,81,84..85,208,211..212,214,216,219..220,
                     222..223,226..227,230..231,233..234,237..238,240..241)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153355"
     Region          358..410
                     /region_name="SH3_PSTPIP1"
                     /note="Src homology 3 domain of Proline-Serine-Threonine
                     Phosphatase-Interacting Protein 1; cd11824"
                     /db_xref="CDD:212758"
     Site            order(363,365,368,372,390..391,404,406..407)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212758"
     CDS             1..411
                     /gene="PSTPIP1"
                     /coded_by="XM_061158927.1:16..1251"
                     /db_xref="GeneID:133067903"
ORIGIN      
        1 mgnrsrpcrd ftahtgyevl lqrlldgrkm ckdveellrq raqaeerygk elvqiarkag
       61 gqteinslra sfdslkqqme nvgsshiqla lalreelrsl eefrerqkeq rkkyeavmdr
      121 vqksklslhk kameskktye qkcrdaddae qaferistng qqkqveksqn kakqckdsam
      181 eaervyrqni eqlervrsew eqehratcea fqlqefdrlt ilrnslwvhc nqlsmqcvkd
      241 delyeevrvt legcsvdadi dgfiqakstg teppapvpyq nyydrevapl tsspgvqpsc
      301 gmikrfsgll hgspkttlsa asaastetlt pipdrnesvy aaiavqeapg pptkpgqdyr
      361 alydytaqns delnisagdi levilegedg wwtvqrngqr gfvpgsylek i
//
LOCUS       XP_061014911             407 aa            linear   MAM 02-DEC-2023
DEFINITION  proline-serine-threonine phosphatase-interacting protein 1 isoform
            X4 [Dama dama].
ACCESSION   XP_061014911
VERSION     XP_061014911.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158928.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..407
                     /product="proline-serine-threonine phosphatase-interacting
                     protein 1 isoform X4"
                     /calculated_mol_wt=46156
     Region          7..248
                     /region_name="BAR"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain, a
                     dimerization module that binds membranes and detects
                     membrane curvature; cl12013"
                     /db_xref="CDD:472257"
     Site            order(12,15..16,20,22..23,26..27,29..30,40..41,43..44,
                     47..48,50..51,54,77,80..81,204,207..208,210,212,215..216,
                     218..219,222..223,226..227,229..230,233..234,236..237)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153355"
     Region          354..406
                     /region_name="SH3_PSTPIP1"
                     /note="Src homology 3 domain of Proline-Serine-Threonine
                     Phosphatase-Interacting Protein 1; cd11824"
                     /db_xref="CDD:212758"
     Site            order(359,361,364,368,386..387,400,402..403)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212758"
     CDS             1..407
                     /gene="PSTPIP1"
                     /coded_by="XM_061158928.1:31..1254"
                     /db_xref="GeneID:133067903"
ORIGIN      
        1 mancrdftah tgyevllqrl ldgrkmckdv eellrqraqa eerygkelvq iarkaggqte
       61 inslrasfds lkqqmenvgs shiqlalalr eelrsleefr erqkeqrkky eavmdrvqks
      121 klslhkkame skktyeqkcr daddaeqafe ristngqqkq veksqnkakq ckdsameaer
      181 vyrqnieqle rvrseweqeh ratceafqlq efdrltilrn slwvhcnqls mqcvkddely
      241 eevrvtlegc svdadidgfi qakstgtepp apvpyqnyyd revapltssp gvqpscgmik
      301 rfsgllhgsp kttlsaasaa stetltpipd rnesvyaaia vqeapgpptk pgqdyralyd
      361 ytaqnsdeln isagdilevi legedgwwtv qrngqrgfvp gsyleki
//
LOCUS       XP_061014912             349 aa            linear   MAM 02-DEC-2023
DEFINITION  proline-serine-threonine phosphatase-interacting protein 1 isoform
            X5 [Dama dama].
ACCESSION   XP_061014912
VERSION     XP_061014912.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158929.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..349
                     /product="proline-serine-threonine phosphatase-interacting
                     protein 1 isoform X5"
                     /calculated_mol_wt=39454
     Region          <4..190
                     /region_name="BAR"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain, a
                     dimerization module that binds membranes and detects
                     membrane curvature; cl12013"
                     /db_xref="CDD:472257"
     Region          296..348
                     /region_name="SH3_PSTPIP1"
                     /note="Src homology 3 domain of Proline-Serine-Threonine
                     Phosphatase-Interacting Protein 1; cd11824"
                     /db_xref="CDD:212758"
     Site            order(301,303,306,310,328..329,342,344..345)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212758"
     CDS             1..349
                     /gene="PSTPIP1"
                     /coded_by="XM_061158929.1:649..1698"
                     /db_xref="GeneID:133067903"
ORIGIN      
        1 mpfgslrasf dslkqqmenv gsshiqlala lreelrslee frerqkeqrk kyeavmdrvq
       61 ksklslhkka meskktyeqk crdaddaeqa feristngqq kqveksqnka kqckdsamea
      121 ervyrqnieq lervrseweq ehratceafq lqefdrltil rnslwvhcnq lsmqcvkdde
      181 lyeevrvtle gcsvdadidg fiqakstgte ppapvpyqny ydrevaplts spgvqpscgm
      241 ikrfsgllhg spkttlsaas aastetltpi pdrnesvyaa iavqeapgpp tkpgqdyral
      301 ydytaqnsde lnisagdile vilegedgww tvqrngqrgf vpgsyleki
//
LOCUS       XP_061014913             253 aa            linear   MAM 02-DEC-2023
DEFINITION  tetraspanin-3 [Dama dama].
ACCESSION   XP_061014913
VERSION     XP_061014913.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158930.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..253
                     /product="tetraspanin-3"
                     /calculated_mol_wt=27860
     Region          9..235
                     /region_name="Tetraspanin"
                     /note="Tetraspanin family; pfam00335"
                     /db_xref="CDD:459767"
     Region          104..210
                     /region_name="TM4SF8_like_LEL"
                     /note="Tetraspanin, extracellular domain or large
                     extracellular loop (LEL), TM4SF8_like subfamily.
                     Tetraspanins are trans-membrane proteins with 4
                     trans-membrane segments. Both the N- and C-termini lie on
                     the intracellular side of the membrane. This alignment...;
                     cd03163"
                     /db_xref="CDD:239416"
     Site            order(106,111,115,117..118,121,137,140..141,144..145)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:239416"
     CDS             1..253
                     /gene="TSPAN3"
                     /coded_by="XM_061158930.1:201..962"
                     /db_xref="GeneID:133067905"
ORIGIN      
        1 mgqcgitssk tvlvflnlif wgaagilcyv gayvfitydd ydhffedvyt lipavviiav
       61 gallfiigli gccatiresr cglatfviil llvfvtevvv vvlgyvyrak venevdrsiq
      121 kvyktyngtn pdaasraidy vqrqlhccgi hnysdwentd wfketknqsv plsccretas
      181 scngslahps dlyaegceal vvkklqeimm hviwaalafa aiqllgmlca civlcrrsrd
      241 payellitgg tya
//
LOCUS       XP_061014914            1748 aa            linear   MAM 02-DEC-2023
DEFINITION  inactive tyrosine-protein kinase PEAK1 isoform X1 [Dama dama].
ACCESSION   XP_061014914
VERSION     XP_061014914.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158931.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1748
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1748
                     /product="inactive tyrosine-protein kinase PEAK1 isoform
                     X1"
                     /calculated_mol_wt=192729
     Region          507..>880
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          <737..968
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1505..1670
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..1748
                     /gene="PEAK1"
                     /coded_by="XM_061158931.1:745..5991"
                     /db_xref="GeneID:133067906"
ORIGIN      
        1 msacntfteh vwkpgecknc fkpkslhqlp pdpekapith gnktnanhsn nhrirntgnf
       61 rppvakkpti avkptmmvad gqsvcgelsi qehcenkpvv igwnrnrmam nqkplnnnne
      121 ddvegfshvp kpygnndsak kisnnnnglt evlkeiagld ttpqikenet nsretflgri
      181 ndcykrsler klppscmmgg mketqgkhvi lsgstevisn eggrfcypef ssgeeseedv
      241 llsnmeeehe swdesdeell ameirmrgqp rfanfrantl spvrffvdkk wntvplrnks
      301 lqricavdyd dsydeilngy eensvvsygp gstqsmvssd stspdsslte esrsetassl
      361 sqkicnggia pgnpgdskdl kesepnyesl sgndqekdss qaskssvkvp ethkavlalr
      421 leekdgkiav qtekpeskas tdiagqavti nlvpveeqak pyrvvnleqp lckpytvvdv
      481 saamasehle ghanspktks ssstpnspvt spaltsghis ahfqkssair yqevwtssts
      541 prqkipkvel issgtgpnvp prkichksap tsptatnvss ktipvkspnl seikfnsynn
      601 agmppfpiii hdeptyarss knaikvpivi npnaydnlai yksflgtsge lsvkekttsv
      661 ishtyeeiet eskasdntts kptecpqakg fsnsterkrg svaqkvqefn sclnrsqssp
      721 qrsyssshss ptklqrttqe pvaktestqe pqgvgsgsst rekastvlsq ivasiqppqs
      781 ppempqsgpk acsveelyav ppdagaaktt pkstpvrpks lftsqpsaea eapqttespt
      841 tkpqkdpltk pvttppsklv tnpqseplap fppprstssp yhasnllqrh ftnwtkptsp
      901 trsteaesvl hsegsrraad akpkrwisfk sffrrrktde eddkekdrek gklvgldgtv
      961 ihmlppppvq rhhwfteakg essekpaivf myrcdpaqgq lsmdqgkara eqsavtekgg
     1021 aeegslqdse kkkrshssps qipkkilshv thevtedfsp rdprtvvvkq dgggctsvtp
     1081 alhlpelere eekedisdpl dlnpcsatys nlgqsraami ppkhprqpkg alddaiafgg
     1141 ktdqeapnal qptppplpkk miirantepl skdlqkslet tlcvmanpty didpswdass
     1201 agssvsyelk gldaesydsl erplhkerrv psaansissl ttlsikdrfs nsteslssrr
     1261 gpsgrqarsi qkpqrqalyr glenreevvg kirslhtdal kklavkcedl fmagqkdqlr
     1321 fgvdswsdfr ltsdkpccea gdavyytasy akdplnnyav kickskakes qqyyhslair
     1381 qslavhfniq qdcghflaev pkrllpwedp dapeeeeddm eateevkgea dgkspdlgse
     1441 aessshkesq avvsrkqrsh vvvitrevpc ltvadfvrds laqhgkspda yerqvcllll
     1501 qlcsglehlk pyhvthcdlr lenlllvhyq pggptqglgp tepsptpscp trlivsnfsq
     1561 akqkshlvdp eilrdqsrla peiitatqyk kcdefqtgil iyemlhlpnp fdenpelkek
     1621 eytradlpri plrspysrgl qqlascllnp npserilisd akgilqcllw gpredlfqtf
     1681 taspspahrn tllqnwldik rtllmikfae ksldreagis ledwlcaqyl afatpdslsc
     1741 vvkilqpr
//
LOCUS       XP_061014915            1748 aa            linear   MAM 02-DEC-2023
DEFINITION  inactive tyrosine-protein kinase PEAK1 isoform X1 [Dama dama].
ACCESSION   XP_061014915
VERSION     XP_061014915.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158932.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1748
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1748
                     /product="inactive tyrosine-protein kinase PEAK1 isoform
                     X1"
                     /calculated_mol_wt=192729
     Region          507..>880
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          <737..968
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1505..1670
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..1748
                     /gene="PEAK1"
                     /coded_by="XM_061158932.1:625..5871"
                     /db_xref="GeneID:133067906"
ORIGIN      
        1 msacntfteh vwkpgecknc fkpkslhqlp pdpekapith gnktnanhsn nhrirntgnf
       61 rppvakkpti avkptmmvad gqsvcgelsi qehcenkpvv igwnrnrmam nqkplnnnne
      121 ddvegfshvp kpygnndsak kisnnnnglt evlkeiagld ttpqikenet nsretflgri
      181 ndcykrsler klppscmmgg mketqgkhvi lsgstevisn eggrfcypef ssgeeseedv
      241 llsnmeeehe swdesdeell ameirmrgqp rfanfrantl spvrffvdkk wntvplrnks
      301 lqricavdyd dsydeilngy eensvvsygp gstqsmvssd stspdsslte esrsetassl
      361 sqkicnggia pgnpgdskdl kesepnyesl sgndqekdss qaskssvkvp ethkavlalr
      421 leekdgkiav qtekpeskas tdiagqavti nlvpveeqak pyrvvnleqp lckpytvvdv
      481 saamasehle ghanspktks ssstpnspvt spaltsghis ahfqkssair yqevwtssts
      541 prqkipkvel issgtgpnvp prkichksap tsptatnvss ktipvkspnl seikfnsynn
      601 agmppfpiii hdeptyarss knaikvpivi npnaydnlai yksflgtsge lsvkekttsv
      661 ishtyeeiet eskasdntts kptecpqakg fsnsterkrg svaqkvqefn sclnrsqssp
      721 qrsyssshss ptklqrttqe pvaktestqe pqgvgsgsst rekastvlsq ivasiqppqs
      781 ppempqsgpk acsveelyav ppdagaaktt pkstpvrpks lftsqpsaea eapqttespt
      841 tkpqkdpltk pvttppsklv tnpqseplap fppprstssp yhasnllqrh ftnwtkptsp
      901 trsteaesvl hsegsrraad akpkrwisfk sffrrrktde eddkekdrek gklvgldgtv
      961 ihmlppppvq rhhwfteakg essekpaivf myrcdpaqgq lsmdqgkara eqsavtekgg
     1021 aeegslqdse kkkrshssps qipkkilshv thevtedfsp rdprtvvvkq dgggctsvtp
     1081 alhlpelere eekedisdpl dlnpcsatys nlgqsraami ppkhprqpkg alddaiafgg
     1141 ktdqeapnal qptppplpkk miirantepl skdlqkslet tlcvmanpty didpswdass
     1201 agssvsyelk gldaesydsl erplhkerrv psaansissl ttlsikdrfs nsteslssrr
     1261 gpsgrqarsi qkpqrqalyr glenreevvg kirslhtdal kklavkcedl fmagqkdqlr
     1321 fgvdswsdfr ltsdkpccea gdavyytasy akdplnnyav kickskakes qqyyhslair
     1381 qslavhfniq qdcghflaev pkrllpwedp dapeeeeddm eateevkgea dgkspdlgse
     1441 aessshkesq avvsrkqrsh vvvitrevpc ltvadfvrds laqhgkspda yerqvcllll
     1501 qlcsglehlk pyhvthcdlr lenlllvhyq pggptqglgp tepsptpscp trlivsnfsq
     1561 akqkshlvdp eilrdqsrla peiitatqyk kcdefqtgil iyemlhlpnp fdenpelkek
     1621 eytradlpri plrspysrgl qqlascllnp npserilisd akgilqcllw gpredlfqtf
     1681 taspspahrn tllqnwldik rtllmikfae ksldreagis ledwlcaqyl afatpdslsc
     1741 vvkilqpr
//
LOCUS       XP_061014916            1748 aa            linear   MAM 02-DEC-2023
DEFINITION  inactive tyrosine-protein kinase PEAK1 isoform X1 [Dama dama].
ACCESSION   XP_061014916
VERSION     XP_061014916.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158933.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1748
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1748
                     /product="inactive tyrosine-protein kinase PEAK1 isoform
                     X1"
                     /calculated_mol_wt=192729
     Region          507..>880
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          <737..968
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1505..1670
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..1748
                     /gene="PEAK1"
                     /coded_by="XM_061158933.1:623..5869"
                     /db_xref="GeneID:133067906"
ORIGIN      
        1 msacntfteh vwkpgecknc fkpkslhqlp pdpekapith gnktnanhsn nhrirntgnf
       61 rppvakkpti avkptmmvad gqsvcgelsi qehcenkpvv igwnrnrmam nqkplnnnne
      121 ddvegfshvp kpygnndsak kisnnnnglt evlkeiagld ttpqikenet nsretflgri
      181 ndcykrsler klppscmmgg mketqgkhvi lsgstevisn eggrfcypef ssgeeseedv
      241 llsnmeeehe swdesdeell ameirmrgqp rfanfrantl spvrffvdkk wntvplrnks
      301 lqricavdyd dsydeilngy eensvvsygp gstqsmvssd stspdsslte esrsetassl
      361 sqkicnggia pgnpgdskdl kesepnyesl sgndqekdss qaskssvkvp ethkavlalr
      421 leekdgkiav qtekpeskas tdiagqavti nlvpveeqak pyrvvnleqp lckpytvvdv
      481 saamasehle ghanspktks ssstpnspvt spaltsghis ahfqkssair yqevwtssts
      541 prqkipkvel issgtgpnvp prkichksap tsptatnvss ktipvkspnl seikfnsynn
      601 agmppfpiii hdeptyarss knaikvpivi npnaydnlai yksflgtsge lsvkekttsv
      661 ishtyeeiet eskasdntts kptecpqakg fsnsterkrg svaqkvqefn sclnrsqssp
      721 qrsyssshss ptklqrttqe pvaktestqe pqgvgsgsst rekastvlsq ivasiqppqs
      781 ppempqsgpk acsveelyav ppdagaaktt pkstpvrpks lftsqpsaea eapqttespt
      841 tkpqkdpltk pvttppsklv tnpqseplap fppprstssp yhasnllqrh ftnwtkptsp
      901 trsteaesvl hsegsrraad akpkrwisfk sffrrrktde eddkekdrek gklvgldgtv
      961 ihmlppppvq rhhwfteakg essekpaivf myrcdpaqgq lsmdqgkara eqsavtekgg
     1021 aeegslqdse kkkrshssps qipkkilshv thevtedfsp rdprtvvvkq dgggctsvtp
     1081 alhlpelere eekedisdpl dlnpcsatys nlgqsraami ppkhprqpkg alddaiafgg
     1141 ktdqeapnal qptppplpkk miirantepl skdlqkslet tlcvmanpty didpswdass
     1201 agssvsyelk gldaesydsl erplhkerrv psaansissl ttlsikdrfs nsteslssrr
     1261 gpsgrqarsi qkpqrqalyr glenreevvg kirslhtdal kklavkcedl fmagqkdqlr
     1321 fgvdswsdfr ltsdkpccea gdavyytasy akdplnnyav kickskakes qqyyhslair
     1381 qslavhfniq qdcghflaev pkrllpwedp dapeeeeddm eateevkgea dgkspdlgse
     1441 aessshkesq avvsrkqrsh vvvitrevpc ltvadfvrds laqhgkspda yerqvcllll
     1501 qlcsglehlk pyhvthcdlr lenlllvhyq pggptqglgp tepsptpscp trlivsnfsq
     1561 akqkshlvdp eilrdqsrla peiitatqyk kcdefqtgil iyemlhlpnp fdenpelkek
     1621 eytradlpri plrspysrgl qqlascllnp npserilisd akgilqcllw gpredlfqtf
     1681 taspspahrn tllqnwldik rtllmikfae ksldreagis ledwlcaqyl afatpdslsc
     1741 vvkilqpr
//
LOCUS       XP_061014917            1748 aa            linear   MAM 02-DEC-2023
DEFINITION  inactive tyrosine-protein kinase PEAK1 isoform X1 [Dama dama].
ACCESSION   XP_061014917
VERSION     XP_061014917.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158934.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1748
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1748
                     /product="inactive tyrosine-protein kinase PEAK1 isoform
                     X1"
                     /calculated_mol_wt=192729
     Region          507..>880
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          <737..968
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1505..1670
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..1748
                     /gene="PEAK1"
                     /coded_by="XM_061158934.1:795..6041"
                     /db_xref="GeneID:133067906"
ORIGIN      
        1 msacntfteh vwkpgecknc fkpkslhqlp pdpekapith gnktnanhsn nhrirntgnf
       61 rppvakkpti avkptmmvad gqsvcgelsi qehcenkpvv igwnrnrmam nqkplnnnne
      121 ddvegfshvp kpygnndsak kisnnnnglt evlkeiagld ttpqikenet nsretflgri
      181 ndcykrsler klppscmmgg mketqgkhvi lsgstevisn eggrfcypef ssgeeseedv
      241 llsnmeeehe swdesdeell ameirmrgqp rfanfrantl spvrffvdkk wntvplrnks
      301 lqricavdyd dsydeilngy eensvvsygp gstqsmvssd stspdsslte esrsetassl
      361 sqkicnggia pgnpgdskdl kesepnyesl sgndqekdss qaskssvkvp ethkavlalr
      421 leekdgkiav qtekpeskas tdiagqavti nlvpveeqak pyrvvnleqp lckpytvvdv
      481 saamasehle ghanspktks ssstpnspvt spaltsghis ahfqkssair yqevwtssts
      541 prqkipkvel issgtgpnvp prkichksap tsptatnvss ktipvkspnl seikfnsynn
      601 agmppfpiii hdeptyarss knaikvpivi npnaydnlai yksflgtsge lsvkekttsv
      661 ishtyeeiet eskasdntts kptecpqakg fsnsterkrg svaqkvqefn sclnrsqssp
      721 qrsyssshss ptklqrttqe pvaktestqe pqgvgsgsst rekastvlsq ivasiqppqs
      781 ppempqsgpk acsveelyav ppdagaaktt pkstpvrpks lftsqpsaea eapqttespt
      841 tkpqkdpltk pvttppsklv tnpqseplap fppprstssp yhasnllqrh ftnwtkptsp
      901 trsteaesvl hsegsrraad akpkrwisfk sffrrrktde eddkekdrek gklvgldgtv
      961 ihmlppppvq rhhwfteakg essekpaivf myrcdpaqgq lsmdqgkara eqsavtekgg
     1021 aeegslqdse kkkrshssps qipkkilshv thevtedfsp rdprtvvvkq dgggctsvtp
     1081 alhlpelere eekedisdpl dlnpcsatys nlgqsraami ppkhprqpkg alddaiafgg
     1141 ktdqeapnal qptppplpkk miirantepl skdlqkslet tlcvmanpty didpswdass
     1201 agssvsyelk gldaesydsl erplhkerrv psaansissl ttlsikdrfs nsteslssrr
     1261 gpsgrqarsi qkpqrqalyr glenreevvg kirslhtdal kklavkcedl fmagqkdqlr
     1321 fgvdswsdfr ltsdkpccea gdavyytasy akdplnnyav kickskakes qqyyhslair
     1381 qslavhfniq qdcghflaev pkrllpwedp dapeeeeddm eateevkgea dgkspdlgse
     1441 aessshkesq avvsrkqrsh vvvitrevpc ltvadfvrds laqhgkspda yerqvcllll
     1501 qlcsglehlk pyhvthcdlr lenlllvhyq pggptqglgp tepsptpscp trlivsnfsq
     1561 akqkshlvdp eilrdqsrla peiitatqyk kcdefqtgil iyemlhlpnp fdenpelkek
     1621 eytradlpri plrspysrgl qqlascllnp npserilisd akgilqcllw gpredlfqtf
     1681 taspspahrn tllqnwldik rtllmikfae ksldreagis ledwlcaqyl afatpdslsc
     1741 vvkilqpr
//
LOCUS       XP_061014918            1748 aa            linear   MAM 02-DEC-2023
DEFINITION  inactive tyrosine-protein kinase PEAK1 isoform X1 [Dama dama].
ACCESSION   XP_061014918
VERSION     XP_061014918.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158935.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1748
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1748
                     /product="inactive tyrosine-protein kinase PEAK1 isoform
                     X1"
                     /calculated_mol_wt=192729
     Region          507..>880
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          <737..968
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1505..1670
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..1748
                     /gene="PEAK1"
                     /coded_by="XM_061158935.1:503..5749"
                     /db_xref="GeneID:133067906"
ORIGIN      
        1 msacntfteh vwkpgecknc fkpkslhqlp pdpekapith gnktnanhsn nhrirntgnf
       61 rppvakkpti avkptmmvad gqsvcgelsi qehcenkpvv igwnrnrmam nqkplnnnne
      121 ddvegfshvp kpygnndsak kisnnnnglt evlkeiagld ttpqikenet nsretflgri
      181 ndcykrsler klppscmmgg mketqgkhvi lsgstevisn eggrfcypef ssgeeseedv
      241 llsnmeeehe swdesdeell ameirmrgqp rfanfrantl spvrffvdkk wntvplrnks
      301 lqricavdyd dsydeilngy eensvvsygp gstqsmvssd stspdsslte esrsetassl
      361 sqkicnggia pgnpgdskdl kesepnyesl sgndqekdss qaskssvkvp ethkavlalr
      421 leekdgkiav qtekpeskas tdiagqavti nlvpveeqak pyrvvnleqp lckpytvvdv
      481 saamasehle ghanspktks ssstpnspvt spaltsghis ahfqkssair yqevwtssts
      541 prqkipkvel issgtgpnvp prkichksap tsptatnvss ktipvkspnl seikfnsynn
      601 agmppfpiii hdeptyarss knaikvpivi npnaydnlai yksflgtsge lsvkekttsv
      661 ishtyeeiet eskasdntts kptecpqakg fsnsterkrg svaqkvqefn sclnrsqssp
      721 qrsyssshss ptklqrttqe pvaktestqe pqgvgsgsst rekastvlsq ivasiqppqs
      781 ppempqsgpk acsveelyav ppdagaaktt pkstpvrpks lftsqpsaea eapqttespt
      841 tkpqkdpltk pvttppsklv tnpqseplap fppprstssp yhasnllqrh ftnwtkptsp
      901 trsteaesvl hsegsrraad akpkrwisfk sffrrrktde eddkekdrek gklvgldgtv
      961 ihmlppppvq rhhwfteakg essekpaivf myrcdpaqgq lsmdqgkara eqsavtekgg
     1021 aeegslqdse kkkrshssps qipkkilshv thevtedfsp rdprtvvvkq dgggctsvtp
     1081 alhlpelere eekedisdpl dlnpcsatys nlgqsraami ppkhprqpkg alddaiafgg
     1141 ktdqeapnal qptppplpkk miirantepl skdlqkslet tlcvmanpty didpswdass
     1201 agssvsyelk gldaesydsl erplhkerrv psaansissl ttlsikdrfs nsteslssrr
     1261 gpsgrqarsi qkpqrqalyr glenreevvg kirslhtdal kklavkcedl fmagqkdqlr
     1321 fgvdswsdfr ltsdkpccea gdavyytasy akdplnnyav kickskakes qqyyhslair
     1381 qslavhfniq qdcghflaev pkrllpwedp dapeeeeddm eateevkgea dgkspdlgse
     1441 aessshkesq avvsrkqrsh vvvitrevpc ltvadfvrds laqhgkspda yerqvcllll
     1501 qlcsglehlk pyhvthcdlr lenlllvhyq pggptqglgp tepsptpscp trlivsnfsq
     1561 akqkshlvdp eilrdqsrla peiitatqyk kcdefqtgil iyemlhlpnp fdenpelkek
     1621 eytradlpri plrspysrgl qqlascllnp npserilisd akgilqcllw gpredlfqtf
     1681 taspspahrn tllqnwldik rtllmikfae ksldreagis ledwlcaqyl afatpdslsc
     1741 vvkilqpr
//
LOCUS       XP_061014919            1748 aa            linear   MAM 02-DEC-2023
DEFINITION  inactive tyrosine-protein kinase PEAK1 isoform X1 [Dama dama].
ACCESSION   XP_061014919
VERSION     XP_061014919.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158936.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1748
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1748
                     /product="inactive tyrosine-protein kinase PEAK1 isoform
                     X1"
                     /calculated_mol_wt=192729
     Region          507..>880
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          <737..968
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1505..1670
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..1748
                     /gene="PEAK1"
                     /coded_by="XM_061158936.1:377..5623"
                     /db_xref="GeneID:133067906"
ORIGIN      
        1 msacntfteh vwkpgecknc fkpkslhqlp pdpekapith gnktnanhsn nhrirntgnf
       61 rppvakkpti avkptmmvad gqsvcgelsi qehcenkpvv igwnrnrmam nqkplnnnne
      121 ddvegfshvp kpygnndsak kisnnnnglt evlkeiagld ttpqikenet nsretflgri
      181 ndcykrsler klppscmmgg mketqgkhvi lsgstevisn eggrfcypef ssgeeseedv
      241 llsnmeeehe swdesdeell ameirmrgqp rfanfrantl spvrffvdkk wntvplrnks
      301 lqricavdyd dsydeilngy eensvvsygp gstqsmvssd stspdsslte esrsetassl
      361 sqkicnggia pgnpgdskdl kesepnyesl sgndqekdss qaskssvkvp ethkavlalr
      421 leekdgkiav qtekpeskas tdiagqavti nlvpveeqak pyrvvnleqp lckpytvvdv
      481 saamasehle ghanspktks ssstpnspvt spaltsghis ahfqkssair yqevwtssts
      541 prqkipkvel issgtgpnvp prkichksap tsptatnvss ktipvkspnl seikfnsynn
      601 agmppfpiii hdeptyarss knaikvpivi npnaydnlai yksflgtsge lsvkekttsv
      661 ishtyeeiet eskasdntts kptecpqakg fsnsterkrg svaqkvqefn sclnrsqssp
      721 qrsyssshss ptklqrttqe pvaktestqe pqgvgsgsst rekastvlsq ivasiqppqs
      781 ppempqsgpk acsveelyav ppdagaaktt pkstpvrpks lftsqpsaea eapqttespt
      841 tkpqkdpltk pvttppsklv tnpqseplap fppprstssp yhasnllqrh ftnwtkptsp
      901 trsteaesvl hsegsrraad akpkrwisfk sffrrrktde eddkekdrek gklvgldgtv
      961 ihmlppppvq rhhwfteakg essekpaivf myrcdpaqgq lsmdqgkara eqsavtekgg
     1021 aeegslqdse kkkrshssps qipkkilshv thevtedfsp rdprtvvvkq dgggctsvtp
     1081 alhlpelere eekedisdpl dlnpcsatys nlgqsraami ppkhprqpkg alddaiafgg
     1141 ktdqeapnal qptppplpkk miirantepl skdlqkslet tlcvmanpty didpswdass
     1201 agssvsyelk gldaesydsl erplhkerrv psaansissl ttlsikdrfs nsteslssrr
     1261 gpsgrqarsi qkpqrqalyr glenreevvg kirslhtdal kklavkcedl fmagqkdqlr
     1321 fgvdswsdfr ltsdkpccea gdavyytasy akdplnnyav kickskakes qqyyhslair
     1381 qslavhfniq qdcghflaev pkrllpwedp dapeeeeddm eateevkgea dgkspdlgse
     1441 aessshkesq avvsrkqrsh vvvitrevpc ltvadfvrds laqhgkspda yerqvcllll
     1501 qlcsglehlk pyhvthcdlr lenlllvhyq pggptqglgp tepsptpscp trlivsnfsq
     1561 akqkshlvdp eilrdqsrla peiitatqyk kcdefqtgil iyemlhlpnp fdenpelkek
     1621 eytradlpri plrspysrgl qqlascllnp npserilisd akgilqcllw gpredlfqtf
     1681 taspspahrn tllqnwldik rtllmikfae ksldreagis ledwlcaqyl afatpdslsc
     1741 vvkilqpr
//
LOCUS       XP_061014920            1748 aa            linear   MAM 02-DEC-2023
DEFINITION  inactive tyrosine-protein kinase PEAK1 isoform X1 [Dama dama].
ACCESSION   XP_061014920
VERSION     XP_061014920.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158937.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1748
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1748
                     /product="inactive tyrosine-protein kinase PEAK1 isoform
                     X1"
                     /calculated_mol_wt=192729
     Region          507..>880
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          <737..968
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1505..1670
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..1748
                     /gene="PEAK1"
                     /coded_by="XM_061158937.1:675..5921"
                     /db_xref="GeneID:133067906"
ORIGIN      
        1 msacntfteh vwkpgecknc fkpkslhqlp pdpekapith gnktnanhsn nhrirntgnf
       61 rppvakkpti avkptmmvad gqsvcgelsi qehcenkpvv igwnrnrmam nqkplnnnne
      121 ddvegfshvp kpygnndsak kisnnnnglt evlkeiagld ttpqikenet nsretflgri
      181 ndcykrsler klppscmmgg mketqgkhvi lsgstevisn eggrfcypef ssgeeseedv
      241 llsnmeeehe swdesdeell ameirmrgqp rfanfrantl spvrffvdkk wntvplrnks
      301 lqricavdyd dsydeilngy eensvvsygp gstqsmvssd stspdsslte esrsetassl
      361 sqkicnggia pgnpgdskdl kesepnyesl sgndqekdss qaskssvkvp ethkavlalr
      421 leekdgkiav qtekpeskas tdiagqavti nlvpveeqak pyrvvnleqp lckpytvvdv
      481 saamasehle ghanspktks ssstpnspvt spaltsghis ahfqkssair yqevwtssts
      541 prqkipkvel issgtgpnvp prkichksap tsptatnvss ktipvkspnl seikfnsynn
      601 agmppfpiii hdeptyarss knaikvpivi npnaydnlai yksflgtsge lsvkekttsv
      661 ishtyeeiet eskasdntts kptecpqakg fsnsterkrg svaqkvqefn sclnrsqssp
      721 qrsyssshss ptklqrttqe pvaktestqe pqgvgsgsst rekastvlsq ivasiqppqs
      781 ppempqsgpk acsveelyav ppdagaaktt pkstpvrpks lftsqpsaea eapqttespt
      841 tkpqkdpltk pvttppsklv tnpqseplap fppprstssp yhasnllqrh ftnwtkptsp
      901 trsteaesvl hsegsrraad akpkrwisfk sffrrrktde eddkekdrek gklvgldgtv
      961 ihmlppppvq rhhwfteakg essekpaivf myrcdpaqgq lsmdqgkara eqsavtekgg
     1021 aeegslqdse kkkrshssps qipkkilshv thevtedfsp rdprtvvvkq dgggctsvtp
     1081 alhlpelere eekedisdpl dlnpcsatys nlgqsraami ppkhprqpkg alddaiafgg
     1141 ktdqeapnal qptppplpkk miirantepl skdlqkslet tlcvmanpty didpswdass
     1201 agssvsyelk gldaesydsl erplhkerrv psaansissl ttlsikdrfs nsteslssrr
     1261 gpsgrqarsi qkpqrqalyr glenreevvg kirslhtdal kklavkcedl fmagqkdqlr
     1321 fgvdswsdfr ltsdkpccea gdavyytasy akdplnnyav kickskakes qqyyhslair
     1381 qslavhfniq qdcghflaev pkrllpwedp dapeeeeddm eateevkgea dgkspdlgse
     1441 aessshkesq avvsrkqrsh vvvitrevpc ltvadfvrds laqhgkspda yerqvcllll
     1501 qlcsglehlk pyhvthcdlr lenlllvhyq pggptqglgp tepsptpscp trlivsnfsq
     1561 akqkshlvdp eilrdqsrla peiitatqyk kcdefqtgil iyemlhlpnp fdenpelkek
     1621 eytradlpri plrspysrgl qqlascllnp npserilisd akgilqcllw gpredlfqtf
     1681 taspspahrn tllqnwldik rtllmikfae ksldreagis ledwlcaqyl afatpdslsc
     1741 vvkilqpr
//
LOCUS       XP_061014921            1748 aa            linear   MAM 02-DEC-2023
DEFINITION  inactive tyrosine-protein kinase PEAK1 isoform X1 [Dama dama].
ACCESSION   XP_061014921
VERSION     XP_061014921.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158938.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1748
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1748
                     /product="inactive tyrosine-protein kinase PEAK1 isoform
                     X1"
                     /calculated_mol_wt=192729
     Region          507..>880
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          <737..968
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1505..1670
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..1748
                     /gene="PEAK1"
                     /coded_by="XM_061158938.1:553..5799"
                     /db_xref="GeneID:133067906"
ORIGIN      
        1 msacntfteh vwkpgecknc fkpkslhqlp pdpekapith gnktnanhsn nhrirntgnf
       61 rppvakkpti avkptmmvad gqsvcgelsi qehcenkpvv igwnrnrmam nqkplnnnne
      121 ddvegfshvp kpygnndsak kisnnnnglt evlkeiagld ttpqikenet nsretflgri
      181 ndcykrsler klppscmmgg mketqgkhvi lsgstevisn eggrfcypef ssgeeseedv
      241 llsnmeeehe swdesdeell ameirmrgqp rfanfrantl spvrffvdkk wntvplrnks
      301 lqricavdyd dsydeilngy eensvvsygp gstqsmvssd stspdsslte esrsetassl
      361 sqkicnggia pgnpgdskdl kesepnyesl sgndqekdss qaskssvkvp ethkavlalr
      421 leekdgkiav qtekpeskas tdiagqavti nlvpveeqak pyrvvnleqp lckpytvvdv
      481 saamasehle ghanspktks ssstpnspvt spaltsghis ahfqkssair yqevwtssts
      541 prqkipkvel issgtgpnvp prkichksap tsptatnvss ktipvkspnl seikfnsynn
      601 agmppfpiii hdeptyarss knaikvpivi npnaydnlai yksflgtsge lsvkekttsv
      661 ishtyeeiet eskasdntts kptecpqakg fsnsterkrg svaqkvqefn sclnrsqssp
      721 qrsyssshss ptklqrttqe pvaktestqe pqgvgsgsst rekastvlsq ivasiqppqs
      781 ppempqsgpk acsveelyav ppdagaaktt pkstpvrpks lftsqpsaea eapqttespt
      841 tkpqkdpltk pvttppsklv tnpqseplap fppprstssp yhasnllqrh ftnwtkptsp
      901 trsteaesvl hsegsrraad akpkrwisfk sffrrrktde eddkekdrek gklvgldgtv
      961 ihmlppppvq rhhwfteakg essekpaivf myrcdpaqgq lsmdqgkara eqsavtekgg
     1021 aeegslqdse kkkrshssps qipkkilshv thevtedfsp rdprtvvvkq dgggctsvtp
     1081 alhlpelere eekedisdpl dlnpcsatys nlgqsraami ppkhprqpkg alddaiafgg
     1141 ktdqeapnal qptppplpkk miirantepl skdlqkslet tlcvmanpty didpswdass
     1201 agssvsyelk gldaesydsl erplhkerrv psaansissl ttlsikdrfs nsteslssrr
     1261 gpsgrqarsi qkpqrqalyr glenreevvg kirslhtdal kklavkcedl fmagqkdqlr
     1321 fgvdswsdfr ltsdkpccea gdavyytasy akdplnnyav kickskakes qqyyhslair
     1381 qslavhfniq qdcghflaev pkrllpwedp dapeeeeddm eateevkgea dgkspdlgse
     1441 aessshkesq avvsrkqrsh vvvitrevpc ltvadfvrds laqhgkspda yerqvcllll
     1501 qlcsglehlk pyhvthcdlr lenlllvhyq pggptqglgp tepsptpscp trlivsnfsq
     1561 akqkshlvdp eilrdqsrla peiitatqyk kcdefqtgil iyemlhlpnp fdenpelkek
     1621 eytradlpri plrspysrgl qqlascllnp npserilisd akgilqcllw gpredlfqtf
     1681 taspspahrn tllqnwldik rtllmikfae ksldreagis ledwlcaqyl afatpdslsc
     1741 vvkilqpr
//
LOCUS       XP_061014922            1748 aa            linear   MAM 02-DEC-2023
DEFINITION  inactive tyrosine-protein kinase PEAK1 isoform X1 [Dama dama].
ACCESSION   XP_061014922
VERSION     XP_061014922.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158939.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1748
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1748
                     /product="inactive tyrosine-protein kinase PEAK1 isoform
                     X1"
                     /calculated_mol_wt=192729
     Region          507..>880
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          <737..968
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1505..1670
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..1748
                     /gene="PEAK1"
                     /coded_by="XM_061158939.1:680..5926"
                     /db_xref="GeneID:133067906"
ORIGIN      
        1 msacntfteh vwkpgecknc fkpkslhqlp pdpekapith gnktnanhsn nhrirntgnf
       61 rppvakkpti avkptmmvad gqsvcgelsi qehcenkpvv igwnrnrmam nqkplnnnne
      121 ddvegfshvp kpygnndsak kisnnnnglt evlkeiagld ttpqikenet nsretflgri
      181 ndcykrsler klppscmmgg mketqgkhvi lsgstevisn eggrfcypef ssgeeseedv
      241 llsnmeeehe swdesdeell ameirmrgqp rfanfrantl spvrffvdkk wntvplrnks
      301 lqricavdyd dsydeilngy eensvvsygp gstqsmvssd stspdsslte esrsetassl
      361 sqkicnggia pgnpgdskdl kesepnyesl sgndqekdss qaskssvkvp ethkavlalr
      421 leekdgkiav qtekpeskas tdiagqavti nlvpveeqak pyrvvnleqp lckpytvvdv
      481 saamasehle ghanspktks ssstpnspvt spaltsghis ahfqkssair yqevwtssts
      541 prqkipkvel issgtgpnvp prkichksap tsptatnvss ktipvkspnl seikfnsynn
      601 agmppfpiii hdeptyarss knaikvpivi npnaydnlai yksflgtsge lsvkekttsv
      661 ishtyeeiet eskasdntts kptecpqakg fsnsterkrg svaqkvqefn sclnrsqssp
      721 qrsyssshss ptklqrttqe pvaktestqe pqgvgsgsst rekastvlsq ivasiqppqs
      781 ppempqsgpk acsveelyav ppdagaaktt pkstpvrpks lftsqpsaea eapqttespt
      841 tkpqkdpltk pvttppsklv tnpqseplap fppprstssp yhasnllqrh ftnwtkptsp
      901 trsteaesvl hsegsrraad akpkrwisfk sffrrrktde eddkekdrek gklvgldgtv
      961 ihmlppppvq rhhwfteakg essekpaivf myrcdpaqgq lsmdqgkara eqsavtekgg
     1021 aeegslqdse kkkrshssps qipkkilshv thevtedfsp rdprtvvvkq dgggctsvtp
     1081 alhlpelere eekedisdpl dlnpcsatys nlgqsraami ppkhprqpkg alddaiafgg
     1141 ktdqeapnal qptppplpkk miirantepl skdlqkslet tlcvmanpty didpswdass
     1201 agssvsyelk gldaesydsl erplhkerrv psaansissl ttlsikdrfs nsteslssrr
     1261 gpsgrqarsi qkpqrqalyr glenreevvg kirslhtdal kklavkcedl fmagqkdqlr
     1321 fgvdswsdfr ltsdkpccea gdavyytasy akdplnnyav kickskakes qqyyhslair
     1381 qslavhfniq qdcghflaev pkrllpwedp dapeeeeddm eateevkgea dgkspdlgse
     1441 aessshkesq avvsrkqrsh vvvitrevpc ltvadfvrds laqhgkspda yerqvcllll
     1501 qlcsglehlk pyhvthcdlr lenlllvhyq pggptqglgp tepsptpscp trlivsnfsq
     1561 akqkshlvdp eilrdqsrla peiitatqyk kcdefqtgil iyemlhlpnp fdenpelkek
     1621 eytradlpri plrspysrgl qqlascllnp npserilisd akgilqcllw gpredlfqtf
     1681 taspspahrn tllqnwldik rtllmikfae ksldreagis ledwlcaqyl afatpdslsc
     1741 vvkilqpr
//
LOCUS       XP_061014923            1748 aa            linear   MAM 02-DEC-2023
DEFINITION  inactive tyrosine-protein kinase PEAK1 isoform X1 [Dama dama].
ACCESSION   XP_061014923
VERSION     XP_061014923.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158940.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1748
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1748
                     /product="inactive tyrosine-protein kinase PEAK1 isoform
                     X1"
                     /calculated_mol_wt=192729
     Region          507..>880
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          <737..968
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1505..1670
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..1748
                     /gene="PEAK1"
                     /coded_by="XM_061158940.1:325..5571"
                     /db_xref="GeneID:133067906"
ORIGIN      
        1 msacntfteh vwkpgecknc fkpkslhqlp pdpekapith gnktnanhsn nhrirntgnf
       61 rppvakkpti avkptmmvad gqsvcgelsi qehcenkpvv igwnrnrmam nqkplnnnne
      121 ddvegfshvp kpygnndsak kisnnnnglt evlkeiagld ttpqikenet nsretflgri
      181 ndcykrsler klppscmmgg mketqgkhvi lsgstevisn eggrfcypef ssgeeseedv
      241 llsnmeeehe swdesdeell ameirmrgqp rfanfrantl spvrffvdkk wntvplrnks
      301 lqricavdyd dsydeilngy eensvvsygp gstqsmvssd stspdsslte esrsetassl
      361 sqkicnggia pgnpgdskdl kesepnyesl sgndqekdss qaskssvkvp ethkavlalr
      421 leekdgkiav qtekpeskas tdiagqavti nlvpveeqak pyrvvnleqp lckpytvvdv
      481 saamasehle ghanspktks ssstpnspvt spaltsghis ahfqkssair yqevwtssts
      541 prqkipkvel issgtgpnvp prkichksap tsptatnvss ktipvkspnl seikfnsynn
      601 agmppfpiii hdeptyarss knaikvpivi npnaydnlai yksflgtsge lsvkekttsv
      661 ishtyeeiet eskasdntts kptecpqakg fsnsterkrg svaqkvqefn sclnrsqssp
      721 qrsyssshss ptklqrttqe pvaktestqe pqgvgsgsst rekastvlsq ivasiqppqs
      781 ppempqsgpk acsveelyav ppdagaaktt pkstpvrpks lftsqpsaea eapqttespt
      841 tkpqkdpltk pvttppsklv tnpqseplap fppprstssp yhasnllqrh ftnwtkptsp
      901 trsteaesvl hsegsrraad akpkrwisfk sffrrrktde eddkekdrek gklvgldgtv
      961 ihmlppppvq rhhwfteakg essekpaivf myrcdpaqgq lsmdqgkara eqsavtekgg
     1021 aeegslqdse kkkrshssps qipkkilshv thevtedfsp rdprtvvvkq dgggctsvtp
     1081 alhlpelere eekedisdpl dlnpcsatys nlgqsraami ppkhprqpkg alddaiafgg
     1141 ktdqeapnal qptppplpkk miirantepl skdlqkslet tlcvmanpty didpswdass
     1201 agssvsyelk gldaesydsl erplhkerrv psaansissl ttlsikdrfs nsteslssrr
     1261 gpsgrqarsi qkpqrqalyr glenreevvg kirslhtdal kklavkcedl fmagqkdqlr
     1321 fgvdswsdfr ltsdkpccea gdavyytasy akdplnnyav kickskakes qqyyhslair
     1381 qslavhfniq qdcghflaev pkrllpwedp dapeeeeddm eateevkgea dgkspdlgse
     1441 aessshkesq avvsrkqrsh vvvitrevpc ltvadfvrds laqhgkspda yerqvcllll
     1501 qlcsglehlk pyhvthcdlr lenlllvhyq pggptqglgp tepsptpscp trlivsnfsq
     1561 akqkshlvdp eilrdqsrla peiitatqyk kcdefqtgil iyemlhlpnp fdenpelkek
     1621 eytradlpri plrspysrgl qqlascllnp npserilisd akgilqcllw gpredlfqtf
     1681 taspspahrn tllqnwldik rtllmikfae ksldreagis ledwlcaqyl afatpdslsc
     1741 vvkilqpr
//
LOCUS       XP_061014924            1748 aa            linear   MAM 02-DEC-2023
DEFINITION  inactive tyrosine-protein kinase PEAK1 isoform X1 [Dama dama].
ACCESSION   XP_061014924
VERSION     XP_061014924.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158941.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1748
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1748
                     /product="inactive tyrosine-protein kinase PEAK1 isoform
                     X1"
                     /calculated_mol_wt=192729
     Region          507..>880
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          <737..968
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1505..1670
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..1748
                     /gene="PEAK1"
                     /coded_by="XM_061158941.1:462..5708"
                     /db_xref="GeneID:133067906"
ORIGIN      
        1 msacntfteh vwkpgecknc fkpkslhqlp pdpekapith gnktnanhsn nhrirntgnf
       61 rppvakkpti avkptmmvad gqsvcgelsi qehcenkpvv igwnrnrmam nqkplnnnne
      121 ddvegfshvp kpygnndsak kisnnnnglt evlkeiagld ttpqikenet nsretflgri
      181 ndcykrsler klppscmmgg mketqgkhvi lsgstevisn eggrfcypef ssgeeseedv
      241 llsnmeeehe swdesdeell ameirmrgqp rfanfrantl spvrffvdkk wntvplrnks
      301 lqricavdyd dsydeilngy eensvvsygp gstqsmvssd stspdsslte esrsetassl
      361 sqkicnggia pgnpgdskdl kesepnyesl sgndqekdss qaskssvkvp ethkavlalr
      421 leekdgkiav qtekpeskas tdiagqavti nlvpveeqak pyrvvnleqp lckpytvvdv
      481 saamasehle ghanspktks ssstpnspvt spaltsghis ahfqkssair yqevwtssts
      541 prqkipkvel issgtgpnvp prkichksap tsptatnvss ktipvkspnl seikfnsynn
      601 agmppfpiii hdeptyarss knaikvpivi npnaydnlai yksflgtsge lsvkekttsv
      661 ishtyeeiet eskasdntts kptecpqakg fsnsterkrg svaqkvqefn sclnrsqssp
      721 qrsyssshss ptklqrttqe pvaktestqe pqgvgsgsst rekastvlsq ivasiqppqs
      781 ppempqsgpk acsveelyav ppdagaaktt pkstpvrpks lftsqpsaea eapqttespt
      841 tkpqkdpltk pvttppsklv tnpqseplap fppprstssp yhasnllqrh ftnwtkptsp
      901 trsteaesvl hsegsrraad akpkrwisfk sffrrrktde eddkekdrek gklvgldgtv
      961 ihmlppppvq rhhwfteakg essekpaivf myrcdpaqgq lsmdqgkara eqsavtekgg
     1021 aeegslqdse kkkrshssps qipkkilshv thevtedfsp rdprtvvvkq dgggctsvtp
     1081 alhlpelere eekedisdpl dlnpcsatys nlgqsraami ppkhprqpkg alddaiafgg
     1141 ktdqeapnal qptppplpkk miirantepl skdlqkslet tlcvmanpty didpswdass
     1201 agssvsyelk gldaesydsl erplhkerrv psaansissl ttlsikdrfs nsteslssrr
     1261 gpsgrqarsi qkpqrqalyr glenreevvg kirslhtdal kklavkcedl fmagqkdqlr
     1321 fgvdswsdfr ltsdkpccea gdavyytasy akdplnnyav kickskakes qqyyhslair
     1381 qslavhfniq qdcghflaev pkrllpwedp dapeeeeddm eateevkgea dgkspdlgse
     1441 aessshkesq avvsrkqrsh vvvitrevpc ltvadfvrds laqhgkspda yerqvcllll
     1501 qlcsglehlk pyhvthcdlr lenlllvhyq pggptqglgp tepsptpscp trlivsnfsq
     1561 akqkshlvdp eilrdqsrla peiitatqyk kcdefqtgil iyemlhlpnp fdenpelkek
     1621 eytradlpri plrspysrgl qqlascllnp npserilisd akgilqcllw gpredlfqtf
     1681 taspspahrn tllqnwldik rtllmikfae ksldreagis ledwlcaqyl afatpdslsc
     1741 vvkilqpr
//
LOCUS       XP_061014925            1748 aa            linear   MAM 02-DEC-2023
DEFINITION  inactive tyrosine-protein kinase PEAK1 isoform X1 [Dama dama].
ACCESSION   XP_061014925
VERSION     XP_061014925.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158942.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1748
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1748
                     /product="inactive tyrosine-protein kinase PEAK1 isoform
                     X1"
                     /calculated_mol_wt=192729
     Region          507..>880
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          <737..968
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1505..1670
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..1748
                     /gene="PEAK1"
                     /coded_by="XM_061158942.1:439..5685"
                     /db_xref="GeneID:133067906"
ORIGIN      
        1 msacntfteh vwkpgecknc fkpkslhqlp pdpekapith gnktnanhsn nhrirntgnf
       61 rppvakkpti avkptmmvad gqsvcgelsi qehcenkpvv igwnrnrmam nqkplnnnne
      121 ddvegfshvp kpygnndsak kisnnnnglt evlkeiagld ttpqikenet nsretflgri
      181 ndcykrsler klppscmmgg mketqgkhvi lsgstevisn eggrfcypef ssgeeseedv
      241 llsnmeeehe swdesdeell ameirmrgqp rfanfrantl spvrffvdkk wntvplrnks
      301 lqricavdyd dsydeilngy eensvvsygp gstqsmvssd stspdsslte esrsetassl
      361 sqkicnggia pgnpgdskdl kesepnyesl sgndqekdss qaskssvkvp ethkavlalr
      421 leekdgkiav qtekpeskas tdiagqavti nlvpveeqak pyrvvnleqp lckpytvvdv
      481 saamasehle ghanspktks ssstpnspvt spaltsghis ahfqkssair yqevwtssts
      541 prqkipkvel issgtgpnvp prkichksap tsptatnvss ktipvkspnl seikfnsynn
      601 agmppfpiii hdeptyarss knaikvpivi npnaydnlai yksflgtsge lsvkekttsv
      661 ishtyeeiet eskasdntts kptecpqakg fsnsterkrg svaqkvqefn sclnrsqssp
      721 qrsyssshss ptklqrttqe pvaktestqe pqgvgsgsst rekastvlsq ivasiqppqs
      781 ppempqsgpk acsveelyav ppdagaaktt pkstpvrpks lftsqpsaea eapqttespt
      841 tkpqkdpltk pvttppsklv tnpqseplap fppprstssp yhasnllqrh ftnwtkptsp
      901 trsteaesvl hsegsrraad akpkrwisfk sffrrrktde eddkekdrek gklvgldgtv
      961 ihmlppppvq rhhwfteakg essekpaivf myrcdpaqgq lsmdqgkara eqsavtekgg
     1021 aeegslqdse kkkrshssps qipkkilshv thevtedfsp rdprtvvvkq dgggctsvtp
     1081 alhlpelere eekedisdpl dlnpcsatys nlgqsraami ppkhprqpkg alddaiafgg
     1141 ktdqeapnal qptppplpkk miirantepl skdlqkslet tlcvmanpty didpswdass
     1201 agssvsyelk gldaesydsl erplhkerrv psaansissl ttlsikdrfs nsteslssrr
     1261 gpsgrqarsi qkpqrqalyr glenreevvg kirslhtdal kklavkcedl fmagqkdqlr
     1321 fgvdswsdfr ltsdkpccea gdavyytasy akdplnnyav kickskakes qqyyhslair
     1381 qslavhfniq qdcghflaev pkrllpwedp dapeeeeddm eateevkgea dgkspdlgse
     1441 aessshkesq avvsrkqrsh vvvitrevpc ltvadfvrds laqhgkspda yerqvcllll
     1501 qlcsglehlk pyhvthcdlr lenlllvhyq pggptqglgp tepsptpscp trlivsnfsq
     1561 akqkshlvdp eilrdqsrla peiitatqyk kcdefqtgil iyemlhlpnp fdenpelkek
     1621 eytradlpri plrspysrgl qqlascllnp npserilisd akgilqcllw gpredlfqtf
     1681 taspspahrn tllqnwldik rtllmikfae ksldreagis ledwlcaqyl afatpdslsc
     1741 vvkilqpr
//
LOCUS       XP_061014926            1748 aa            linear   MAM 02-DEC-2023
DEFINITION  inactive tyrosine-protein kinase PEAK1 isoform X1 [Dama dama].
ACCESSION   XP_061014926
VERSION     XP_061014926.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158943.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1748
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1748
                     /product="inactive tyrosine-protein kinase PEAK1 isoform
                     X1"
                     /calculated_mol_wt=192729
     Region          507..>880
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          <737..968
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1505..1670
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..1748
                     /gene="PEAK1"
                     /coded_by="XM_061158943.1:807..6053"
                     /db_xref="GeneID:133067906"
ORIGIN      
        1 msacntfteh vwkpgecknc fkpkslhqlp pdpekapith gnktnanhsn nhrirntgnf
       61 rppvakkpti avkptmmvad gqsvcgelsi qehcenkpvv igwnrnrmam nqkplnnnne
      121 ddvegfshvp kpygnndsak kisnnnnglt evlkeiagld ttpqikenet nsretflgri
      181 ndcykrsler klppscmmgg mketqgkhvi lsgstevisn eggrfcypef ssgeeseedv
      241 llsnmeeehe swdesdeell ameirmrgqp rfanfrantl spvrffvdkk wntvplrnks
      301 lqricavdyd dsydeilngy eensvvsygp gstqsmvssd stspdsslte esrsetassl
      361 sqkicnggia pgnpgdskdl kesepnyesl sgndqekdss qaskssvkvp ethkavlalr
      421 leekdgkiav qtekpeskas tdiagqavti nlvpveeqak pyrvvnleqp lckpytvvdv
      481 saamasehle ghanspktks ssstpnspvt spaltsghis ahfqkssair yqevwtssts
      541 prqkipkvel issgtgpnvp prkichksap tsptatnvss ktipvkspnl seikfnsynn
      601 agmppfpiii hdeptyarss knaikvpivi npnaydnlai yksflgtsge lsvkekttsv
      661 ishtyeeiet eskasdntts kptecpqakg fsnsterkrg svaqkvqefn sclnrsqssp
      721 qrsyssshss ptklqrttqe pvaktestqe pqgvgsgsst rekastvlsq ivasiqppqs
      781 ppempqsgpk acsveelyav ppdagaaktt pkstpvrpks lftsqpsaea eapqttespt
      841 tkpqkdpltk pvttppsklv tnpqseplap fppprstssp yhasnllqrh ftnwtkptsp
      901 trsteaesvl hsegsrraad akpkrwisfk sffrrrktde eddkekdrek gklvgldgtv
      961 ihmlppppvq rhhwfteakg essekpaivf myrcdpaqgq lsmdqgkara eqsavtekgg
     1021 aeegslqdse kkkrshssps qipkkilshv thevtedfsp rdprtvvvkq dgggctsvtp
     1081 alhlpelere eekedisdpl dlnpcsatys nlgqsraami ppkhprqpkg alddaiafgg
     1141 ktdqeapnal qptppplpkk miirantepl skdlqkslet tlcvmanpty didpswdass
     1201 agssvsyelk gldaesydsl erplhkerrv psaansissl ttlsikdrfs nsteslssrr
     1261 gpsgrqarsi qkpqrqalyr glenreevvg kirslhtdal kklavkcedl fmagqkdqlr
     1321 fgvdswsdfr ltsdkpccea gdavyytasy akdplnnyav kickskakes qqyyhslair
     1381 qslavhfniq qdcghflaev pkrllpwedp dapeeeeddm eateevkgea dgkspdlgse
     1441 aessshkesq avvsrkqrsh vvvitrevpc ltvadfvrds laqhgkspda yerqvcllll
     1501 qlcsglehlk pyhvthcdlr lenlllvhyq pggptqglgp tepsptpscp trlivsnfsq
     1561 akqkshlvdp eilrdqsrla peiitatqyk kcdefqtgil iyemlhlpnp fdenpelkek
     1621 eytradlpri plrspysrgl qqlascllnp npserilisd akgilqcllw gpredlfqtf
     1681 taspspahrn tllqnwldik rtllmikfae ksldreagis ledwlcaqyl afatpdslsc
     1741 vvkilqpr
//
LOCUS       XP_061014927            1748 aa            linear   MAM 02-DEC-2023
DEFINITION  inactive tyrosine-protein kinase PEAK1 isoform X1 [Dama dama].
ACCESSION   XP_061014927
VERSION     XP_061014927.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158944.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1748
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1748
                     /product="inactive tyrosine-protein kinase PEAK1 isoform
                     X1"
                     /calculated_mol_wt=192729
     Region          507..>880
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          <737..968
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1505..1670
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..1748
                     /gene="PEAK1"
                     /coded_by="XM_061158944.1:463..5709"
                     /db_xref="GeneID:133067906"
ORIGIN      
        1 msacntfteh vwkpgecknc fkpkslhqlp pdpekapith gnktnanhsn nhrirntgnf
       61 rppvakkpti avkptmmvad gqsvcgelsi qehcenkpvv igwnrnrmam nqkplnnnne
      121 ddvegfshvp kpygnndsak kisnnnnglt evlkeiagld ttpqikenet nsretflgri
      181 ndcykrsler klppscmmgg mketqgkhvi lsgstevisn eggrfcypef ssgeeseedv
      241 llsnmeeehe swdesdeell ameirmrgqp rfanfrantl spvrffvdkk wntvplrnks
      301 lqricavdyd dsydeilngy eensvvsygp gstqsmvssd stspdsslte esrsetassl
      361 sqkicnggia pgnpgdskdl kesepnyesl sgndqekdss qaskssvkvp ethkavlalr
      421 leekdgkiav qtekpeskas tdiagqavti nlvpveeqak pyrvvnleqp lckpytvvdv
      481 saamasehle ghanspktks ssstpnspvt spaltsghis ahfqkssair yqevwtssts
      541 prqkipkvel issgtgpnvp prkichksap tsptatnvss ktipvkspnl seikfnsynn
      601 agmppfpiii hdeptyarss knaikvpivi npnaydnlai yksflgtsge lsvkekttsv
      661 ishtyeeiet eskasdntts kptecpqakg fsnsterkrg svaqkvqefn sclnrsqssp
      721 qrsyssshss ptklqrttqe pvaktestqe pqgvgsgsst rekastvlsq ivasiqppqs
      781 ppempqsgpk acsveelyav ppdagaaktt pkstpvrpks lftsqpsaea eapqttespt
      841 tkpqkdpltk pvttppsklv tnpqseplap fppprstssp yhasnllqrh ftnwtkptsp
      901 trsteaesvl hsegsrraad akpkrwisfk sffrrrktde eddkekdrek gklvgldgtv
      961 ihmlppppvq rhhwfteakg essekpaivf myrcdpaqgq lsmdqgkara eqsavtekgg
     1021 aeegslqdse kkkrshssps qipkkilshv thevtedfsp rdprtvvvkq dgggctsvtp
     1081 alhlpelere eekedisdpl dlnpcsatys nlgqsraami ppkhprqpkg alddaiafgg
     1141 ktdqeapnal qptppplpkk miirantepl skdlqkslet tlcvmanpty didpswdass
     1201 agssvsyelk gldaesydsl erplhkerrv psaansissl ttlsikdrfs nsteslssrr
     1261 gpsgrqarsi qkpqrqalyr glenreevvg kirslhtdal kklavkcedl fmagqkdqlr
     1321 fgvdswsdfr ltsdkpccea gdavyytasy akdplnnyav kickskakes qqyyhslair
     1381 qslavhfniq qdcghflaev pkrllpwedp dapeeeeddm eateevkgea dgkspdlgse
     1441 aessshkesq avvsrkqrsh vvvitrevpc ltvadfvrds laqhgkspda yerqvcllll
     1501 qlcsglehlk pyhvthcdlr lenlllvhyq pggptqglgp tepsptpscp trlivsnfsq
     1561 akqkshlvdp eilrdqsrla peiitatqyk kcdefqtgil iyemlhlpnp fdenpelkek
     1621 eytradlpri plrspysrgl qqlascllnp npserilisd akgilqcllw gpredlfqtf
     1681 taspspahrn tllqnwldik rtllmikfae ksldreagis ledwlcaqyl afatpdslsc
     1741 vvkilqpr
//
LOCUS       XP_061014928            1748 aa            linear   MAM 02-DEC-2023
DEFINITION  inactive tyrosine-protein kinase PEAK1 isoform X1 [Dama dama].
ACCESSION   XP_061014928
VERSION     XP_061014928.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158945.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1748
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1748
                     /product="inactive tyrosine-protein kinase PEAK1 isoform
                     X1"
                     /calculated_mol_wt=192729
     Region          507..>880
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          <737..968
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1505..1670
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..1748
                     /gene="PEAK1"
                     /coded_by="XM_061158945.1:212..5458"
                     /db_xref="GeneID:133067906"
ORIGIN      
        1 msacntfteh vwkpgecknc fkpkslhqlp pdpekapith gnktnanhsn nhrirntgnf
       61 rppvakkpti avkptmmvad gqsvcgelsi qehcenkpvv igwnrnrmam nqkplnnnne
      121 ddvegfshvp kpygnndsak kisnnnnglt evlkeiagld ttpqikenet nsretflgri
      181 ndcykrsler klppscmmgg mketqgkhvi lsgstevisn eggrfcypef ssgeeseedv
      241 llsnmeeehe swdesdeell ameirmrgqp rfanfrantl spvrffvdkk wntvplrnks
      301 lqricavdyd dsydeilngy eensvvsygp gstqsmvssd stspdsslte esrsetassl
      361 sqkicnggia pgnpgdskdl kesepnyesl sgndqekdss qaskssvkvp ethkavlalr
      421 leekdgkiav qtekpeskas tdiagqavti nlvpveeqak pyrvvnleqp lckpytvvdv
      481 saamasehle ghanspktks ssstpnspvt spaltsghis ahfqkssair yqevwtssts
      541 prqkipkvel issgtgpnvp prkichksap tsptatnvss ktipvkspnl seikfnsynn
      601 agmppfpiii hdeptyarss knaikvpivi npnaydnlai yksflgtsge lsvkekttsv
      661 ishtyeeiet eskasdntts kptecpqakg fsnsterkrg svaqkvqefn sclnrsqssp
      721 qrsyssshss ptklqrttqe pvaktestqe pqgvgsgsst rekastvlsq ivasiqppqs
      781 ppempqsgpk acsveelyav ppdagaaktt pkstpvrpks lftsqpsaea eapqttespt
      841 tkpqkdpltk pvttppsklv tnpqseplap fppprstssp yhasnllqrh ftnwtkptsp
      901 trsteaesvl hsegsrraad akpkrwisfk sffrrrktde eddkekdrek gklvgldgtv
      961 ihmlppppvq rhhwfteakg essekpaivf myrcdpaqgq lsmdqgkara eqsavtekgg
     1021 aeegslqdse kkkrshssps qipkkilshv thevtedfsp rdprtvvvkq dgggctsvtp
     1081 alhlpelere eekedisdpl dlnpcsatys nlgqsraami ppkhprqpkg alddaiafgg
     1141 ktdqeapnal qptppplpkk miirantepl skdlqkslet tlcvmanpty didpswdass
     1201 agssvsyelk gldaesydsl erplhkerrv psaansissl ttlsikdrfs nsteslssrr
     1261 gpsgrqarsi qkpqrqalyr glenreevvg kirslhtdal kklavkcedl fmagqkdqlr
     1321 fgvdswsdfr ltsdkpccea gdavyytasy akdplnnyav kickskakes qqyyhslair
     1381 qslavhfniq qdcghflaev pkrllpwedp dapeeeeddm eateevkgea dgkspdlgse
     1441 aessshkesq avvsrkqrsh vvvitrevpc ltvadfvrds laqhgkspda yerqvcllll
     1501 qlcsglehlk pyhvthcdlr lenlllvhyq pggptqglgp tepsptpscp trlivsnfsq
     1561 akqkshlvdp eilrdqsrla peiitatqyk kcdefqtgil iyemlhlpnp fdenpelkek
     1621 eytradlpri plrspysrgl qqlascllnp npserilisd akgilqcllw gpredlfqtf
     1681 taspspahrn tllqnwldik rtllmikfae ksldreagis ledwlcaqyl afatpdslsc
     1741 vvkilqpr
//
LOCUS       XP_061014929            1126 aa            linear   MAM 02-DEC-2023
DEFINITION  inactive tyrosine-protein kinase PEAK1 isoform X2 [Dama dama].
ACCESSION   XP_061014929
VERSION     XP_061014929.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158946.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1126
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1126
                     /product="inactive tyrosine-protein kinase PEAK1 isoform
                     X2"
                     /calculated_mol_wt=123314
     Region          507..>880
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          <737..968
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1126
                     /gene="PEAK1"
                     /coded_by="XM_061158946.1:742..4122"
                     /db_xref="GeneID:133067906"
ORIGIN      
        1 msacntfteh vwkpgecknc fkpkslhqlp pdpekapith gnktnanhsn nhrirntgnf
       61 rppvakkpti avkptmmvad gqsvcgelsi qehcenkpvv igwnrnrmam nqkplnnnne
      121 ddvegfshvp kpygnndsak kisnnnnglt evlkeiagld ttpqikenet nsretflgri
      181 ndcykrsler klppscmmgg mketqgkhvi lsgstevisn eggrfcypef ssgeeseedv
      241 llsnmeeehe swdesdeell ameirmrgqp rfanfrantl spvrffvdkk wntvplrnks
      301 lqricavdyd dsydeilngy eensvvsygp gstqsmvssd stspdsslte esrsetassl
      361 sqkicnggia pgnpgdskdl kesepnyesl sgndqekdss qaskssvkvp ethkavlalr
      421 leekdgkiav qtekpeskas tdiagqavti nlvpveeqak pyrvvnleqp lckpytvvdv
      481 saamasehle ghanspktks ssstpnspvt spaltsghis ahfqkssair yqevwtssts
      541 prqkipkvel issgtgpnvp prkichksap tsptatnvss ktipvkspnl seikfnsynn
      601 agmppfpiii hdeptyarss knaikvpivi npnaydnlai yksflgtsge lsvkekttsv
      661 ishtyeeiet eskasdntts kptecpqakg fsnsterkrg svaqkvqefn sclnrsqssp
      721 qrsyssshss ptklqrttqe pvaktestqe pqgvgsgsst rekastvlsq ivasiqppqs
      781 ppempqsgpk acsveelyav ppdagaaktt pkstpvrpks lftsqpsaea eapqttespt
      841 tkpqkdpltk pvttppsklv tnpqseplap fppprstssp yhasnllqrh ftnwtkptsp
      901 trsteaesvl hsegsrraad akpkrwisfk sffrrrktde eddkekdrek gklvgldgtv
      961 ihmlppppvq rhhwfteakg essekpaivf myrcdpaqgq lsmdqgkara eqsavtekgg
     1021 aeegslqdse kkkrshssps qipkkilshv thevtedfsp rdprtvvvkq dgggctsvtp
     1081 alhlpelere eekedisdpl dlnpcsatys nldeesiaqs hrtnkd
//
LOCUS       XP_061014930             347 aa            linear   MAM 02-DEC-2023
DEFINITION  high mobility group protein 20A [Dama dama].
ACCESSION   XP_061014930
VERSION     XP_061014930.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158947.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..347
                     /product="high mobility group protein 20A"
                     /calculated_mol_wt=39971
     Region          <64..313
                     /region_name="DUF5401"
                     /note="Family of unknown function (DUF5401); pfam17380"
                     /db_xref="CDD:375164"
     Region          83..186
                     /region_name="HMG-box_HMG20A"
                     /note="high mobility group (HMG)-box found in high
                     mobility group protein 20A (HMG20A) and similar proteins;
                     cd22017"
                     /db_xref="CDD:438833"
     Site            order(104..105,107..111,114..115,122,134..135,138,
                     141..142,149,153,156,160,163)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438833"
     CDS             1..347
                     /gene="HMG20A"
                     /coded_by="XM_061158947.1:260..1303"
                     /db_xref="GeneID:133067908"
ORIGIN      
        1 metlmtsstl pplfadedgs kesndlastg lthpeapyss gatsstnnpe fvedlsqgql
       61 lqnessntae gneqrhedeq rskrggwskg rkrkkplrds napkspltgy vrfmnerreq
      121 lrakrpevpf peitrmlgne wsklppeekq ryldeadrdk erymkeleqy qkteaykvfs
      181 rktqdrqkgk shrqdaarqa thdhekeaev kersvfdipi fteeflnhsk areaelrqlr
      241 ksnmefeern aalqkhvesm rtaveklevd viqersrntv lqqhletlrq vltssfasmp
      301 lpgsgetptv dtidsymnrl hsiilanpqd nenfiatvre vvnrldr
//
LOCUS       XP_061014931             347 aa            linear   MAM 02-DEC-2023
DEFINITION  high mobility group protein 20A [Dama dama].
ACCESSION   XP_061014931
VERSION     XP_061014931.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158948.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..347
                     /product="high mobility group protein 20A"
                     /calculated_mol_wt=39971
     Region          <64..313
                     /region_name="DUF5401"
                     /note="Family of unknown function (DUF5401); pfam17380"
                     /db_xref="CDD:375164"
     Region          83..186
                     /region_name="HMG-box_HMG20A"
                     /note="high mobility group (HMG)-box found in high
                     mobility group protein 20A (HMG20A) and similar proteins;
                     cd22017"
                     /db_xref="CDD:438833"
     Site            order(104..105,107..111,114..115,122,134..135,138,
                     141..142,149,153,156,160,163)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438833"
     CDS             1..347
                     /gene="HMG20A"
                     /coded_by="XM_061158948.1:260..1303"
                     /db_xref="GeneID:133067908"
ORIGIN      
        1 metlmtsstl pplfadedgs kesndlastg lthpeapyss gatsstnnpe fvedlsqgql
       61 lqnessntae gneqrhedeq rskrggwskg rkrkkplrds napkspltgy vrfmnerreq
      121 lrakrpevpf peitrmlgne wsklppeekq ryldeadrdk erymkeleqy qkteaykvfs
      181 rktqdrqkgk shrqdaarqa thdhekeaev kersvfdipi fteeflnhsk areaelrqlr
      241 ksnmefeern aalqkhvesm rtaveklevd viqersrntv lqqhletlrq vltssfasmp
      301 lpgsgetptv dtidsymnrl hsiilanpqd nenfiatvre vvnrldr
//
LOCUS       XP_061014932             347 aa            linear   MAM 02-DEC-2023
DEFINITION  high mobility group protein 20A [Dama dama].
ACCESSION   XP_061014932
VERSION     XP_061014932.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158949.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..347
                     /product="high mobility group protein 20A"
                     /calculated_mol_wt=39971
     Region          <64..313
                     /region_name="DUF5401"
                     /note="Family of unknown function (DUF5401); pfam17380"
                     /db_xref="CDD:375164"
     Region          83..186
                     /region_name="HMG-box_HMG20A"
                     /note="high mobility group (HMG)-box found in high
                     mobility group protein 20A (HMG20A) and similar proteins;
                     cd22017"
                     /db_xref="CDD:438833"
     Site            order(104..105,107..111,114..115,122,134..135,138,
                     141..142,149,153,156,160,163)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438833"
     CDS             1..347
                     /gene="HMG20A"
                     /coded_by="XM_061158949.1:260..1303"
                     /db_xref="GeneID:133067908"
ORIGIN      
        1 metlmtsstl pplfadedgs kesndlastg lthpeapyss gatsstnnpe fvedlsqgql
       61 lqnessntae gneqrhedeq rskrggwskg rkrkkplrds napkspltgy vrfmnerreq
      121 lrakrpevpf peitrmlgne wsklppeekq ryldeadrdk erymkeleqy qkteaykvfs
      181 rktqdrqkgk shrqdaarqa thdhekeaev kersvfdipi fteeflnhsk areaelrqlr
      241 ksnmefeern aalqkhvesm rtaveklevd viqersrntv lqqhletlrq vltssfasmp
      301 lpgsgetptv dtidsymnrl hsiilanpqd nenfiatvre vvnrldr
//
LOCUS       XP_061014933            2319 aa            linear   MAM 02-DEC-2023
DEFINITION  chondroitin sulfate proteoglycan 4 [Dama dama].
ACCESSION   XP_061014933
VERSION     XP_061014933.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158950.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2319
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2319
                     /product="chondroitin sulfate proteoglycan 4"
                     /calculated_mol_wt=250299
     Region          29..176
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cd00110"
                     /db_xref="CDD:238058"
     Region          203..358
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cd00110"
                     /db_xref="CDD:238058"
     Region          <433..520
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     Region          533..642
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     Region          771..875
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     Region          881..986
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     Region          1000..1107
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     Region          1125..1212
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     Region          1222..1336
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     Region          <1362..1446
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     Region          1453..1560
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     Region          1701..1799
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     Region          1812..1921
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     Region          2035..2120
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     CDS             1..2319
                     /gene="CSPG4"
                     /coded_by="XM_061158950.1:87..7046"
                     /db_xref="GeneID:133067910"
ORIGIN      
        1 mrwgprlplp apalalaltf avlvgpasta sffgenhlev pvataltdia lqlefstaqp
       61 eallllaagp adylllqlys grlqvrlllg qeevrvqtpa eallsdsvph iveltvsdsw
      121 allsvdglln asapvqrapl evpyglflgg tgsldlpylt rasrplrgcl htailngrsl
      181 lrpltadvpe gcaeefsagd dvamgfsgpy slaafpawgt rdegtleftl ttrsqkapla
      241 fqaggrqgdf vyvdifeghl ravvekgqgt vllhnsmpva dgqphevsih vdthrleisv
      301 dqyptrtsnr gvlsyleprg nlllggldae asrhlqehrl glavnvsllg cmedlsvngq
      361 rqglreallt rnmaagcrle edeyeedayg pyeafstlap evwsamelpe pcvpepglpp
      421 vfanftqllt isplvvaegg tawlewrhvq ptldlneael rksqvlfsvs rgarhgelel
      481 dipgaqarkm ftlldvvnrk arfvhdgsed psdqlvlevs vttrgavpsc lrrgqtyilp
      541 iqvnpvndpp rvifphgslm vilehtqkpl gpevfqaydp dsvcegltfq llgapaglpv
      601 errdqpgepa tefscrelea gslvyvhrgg paadltfrvs dglqasppvt lkvvavrpai
      661 qvlhntglrl aqgsaapvlp tnlsvqtnav gqdvsvlfrv tgalrlgelq kqgaggaegt
      721 ewrstqafhq rdveqgrvry lstdpqhhak dtvesvalev qvgqealsnl tfpvtvqrat
      781 vrllrleplh tqntqqealt tahleatlee agphpttfly evvqaprkgn lqlqgtrlsd
      841 gqsftqddlr agrvtygata rdseavedaf rfrvtapphf splytfpiyi ggdpdapvlt
      901 nvllsvpegg egvlsadhlf vkslnsasyl yevmerprhg rlvwrdaqdk atmvtsftne
      961 dllhgrlvyq hdnsettedd ipfvatrqge gssdmaweev rgvfrvaiqp vndhapvqti
     1021 srvfhvargg qrllttddva fsdadsgfad aqlvltrkdl lfgsivavde psrpiyrftq
     1081 edlrnrrvlf vhsgadrgwi qlqvsdgqhq atallevqas epylrvangs glvvpqggqg
     1141 tidtamlpld tnldirsgde vryqvtsgpr wgqllragqp vtsftqqdll etailyshng
     1201 slsprdtlaf sveagpvhte atlqvtiaie gpvaplhlvr hkkiyvfqge aaeirrdlle
     1261 aaqeavppad ivfsvktpps agylvmlshg avaaeppsld pvhrfsqeav dagrvlylhs
     1321 rpevwsdtfs ldvssglgap legvrvelev lpaaipleaq nfsvpeggar tlappllrva
     1381 gpyfptlpal hlqllepprh galqreegpq dgslsafswr eveqqliryv hdgsetlads
     1441 fvlvanasem drqshpvvft itilpvndqp pilttntglq mweettvpip aealrgtdsd
     1501 sgpedlvytl erpsngrvvl stapsteihs ftqaqldggl vlfshrgald ggfrfslsdg
     1561 ehssaghffr vtaqkqllls legsrtltvc pgsvqplssq slrasssagt dpqhllyrvl
     1621 ggprlgrlfh tqqgstgeal enftqaevya gnvlfehemp sepfweahdt lelqlssppa
     1681 pdmvatlavt vtfeaacpqr psrlwrnkgl wvsegqraei ttaaldaanl lasvpsprrl
     1741 ehdvlfqitq fptrgqllvs eeplhaarph flqselaagq lvyahggggt qqdgfrfrah
     1801 lqgpagtsva gpqtseafti tvrdvnerpp qpqpsvplrl trgsrspvsr aqlsvvdpds
     1861 tpgeieyevq raphngflsl agaspgpvtr ftqadvdagr lafvangssv vgvfqlsvsd
     1921 gasppllmsl avdvlpsaie vqlraplevp qalgrsslsr qqlrvvsdre epdaayrltr
     1981 gpryghllvg gqpatafsql qvdqgdvvfa ftnfssshdq fsilalarga nasatvnvtv
     2041 rallhvwtgg pwpqgatlrl dptvldagel anrtgsvprf rllagprhgr vvrvprarte
     2101 prggqlveqf tqqdledgrl glevgrpegs spgptgdsli lelwargvpp avasldfate
     2161 pfnaartyrv allslpeaar tetgepesgt ptggpspats spvppmasgg flgfleanmf
     2221 sviipiclvl lllalivpll fylrkrnktg khnvqvltak prnglasdae tfrkvepgqa
     2281 ipltavpgqg sppggqpdpe llqfcrtanp alkngqywv
//
LOCUS       XP_061014934             568 aa            linear   MAM 02-DEC-2023
DEFINITION  sorting nexin-33 [Dama dama].
ACCESSION   XP_061014934
VERSION     XP_061014934.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158951.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..568
                     /product="sorting nexin-33"
                     /calculated_mol_wt=64912
     Region          4..58
                     /region_name="SH3_SNX33"
                     /note="Src Homology 3 domain of Sorting Nexin 33; cd11896"
                     /db_xref="CDD:212829"
     Site            order(9,11,14,18,37..38,52,54..55)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212829"
     Region          224..348
                     /region_name="PX_domain"
                     /note="The Phox Homology domain, a phosphoinositide
                     binding module; cl02563"
                     /db_xref="CDD:470617"
     Site            order(260..262,286..287,300)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132768"
     Region          359..565
                     /region_name="BAR_SNX33"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of Sorting
                     Nexin 33; cd07669"
                     /db_xref="CDD:153353"
     Site            order(378,381..382,385..386,388..389,392,395..396,399,
                     407..408,410..411,414,417..418,421..422,425,430,433,444,
                     526,529..530,532..534,537,540..541,543..545,547..548,
                     551..552,554..555,558..559,561..562,565)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153353"
     Site            order(380,398..399,406,410,484,489,495,501)
                     /site_type="other"
                     /note="putative membrane interaction site"
                     /db_xref="CDD:153353"
     CDS             1..568
                     /gene="SNX33"
                     /coded_by="XM_061158951.1:554..2260"
                     /db_xref="GeneID:133067911"
ORIGIN      
        1 malkgralyd frsenkeeis iwqdedlvif setsldgwlq gqnsrgetgl fpasyveilr
       61 sdtgsnhady sgspagslst qvslydssnt srsggflsnq gsfeeddddd wddwddgctv
      121 veepragglg tnghpplnls ypgaypsqhm afrpkppler qdslasakrg svvgrnlnrf
      181 scfvrsgvea filgdvpmma kiaetysiem gprgpqwkan phpfscsved ptkqtkfkgi
      241 ksyisykltp thasspvyrr ykhfdwlynr llhkftvisv phlpekqatg rfeedfiekr
      301 krrlilwmdh mtshpvlsqy egfqhflscl ddkqwkmgkr raekdemvga sflltfqipt
      361 ehqdlqdved rvdtfkafsk kmddsvlqls tvaselvrkh vggfrkefqk lgnafqaish
      421 afqmdppfss ealnsaisht grtyemvgem faeqpkndlf rmldtlslyq gllsnfpdii
      481 hlqkgafakv kesqrmsdeg rmaqeeadgi rrrcrvvgfa lqaemnhfhq rreldfkhmm
      541 qnylrqqilf yqrvgqqlek tlrmydsl
//
LOCUS       XP_061014935             568 aa            linear   MAM 02-DEC-2023
DEFINITION  sorting nexin-33 [Dama dama].
ACCESSION   XP_061014935
VERSION     XP_061014935.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158952.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..568
                     /product="sorting nexin-33"
                     /calculated_mol_wt=64912
     Region          4..58
                     /region_name="SH3_SNX33"
                     /note="Src Homology 3 domain of Sorting Nexin 33; cd11896"
                     /db_xref="CDD:212829"
     Site            order(9,11,14,18,37..38,52,54..55)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212829"
     Region          224..348
                     /region_name="PX_domain"
                     /note="The Phox Homology domain, a phosphoinositide
                     binding module; cl02563"
                     /db_xref="CDD:470617"
     Site            order(260..262,286..287,300)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132768"
     Region          359..565
                     /region_name="BAR_SNX33"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of Sorting
                     Nexin 33; cd07669"
                     /db_xref="CDD:153353"
     Site            order(378,381..382,385..386,388..389,392,395..396,399,
                     407..408,410..411,414,417..418,421..422,425,430,433,444,
                     526,529..530,532..534,537,540..541,543..545,547..548,
                     551..552,554..555,558..559,561..562,565)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153353"
     Site            order(380,398..399,406,410,484,489,495,501)
                     /site_type="other"
                     /note="putative membrane interaction site"
                     /db_xref="CDD:153353"
     CDS             1..568
                     /gene="SNX33"
                     /coded_by="XM_061158952.1:1278..2984"
                     /db_xref="GeneID:133067911"
ORIGIN      
        1 malkgralyd frsenkeeis iwqdedlvif setsldgwlq gqnsrgetgl fpasyveilr
       61 sdtgsnhady sgspagslst qvslydssnt srsggflsnq gsfeeddddd wddwddgctv
      121 veepragglg tnghpplnls ypgaypsqhm afrpkppler qdslasakrg svvgrnlnrf
      181 scfvrsgvea filgdvpmma kiaetysiem gprgpqwkan phpfscsved ptkqtkfkgi
      241 ksyisykltp thasspvyrr ykhfdwlynr llhkftvisv phlpekqatg rfeedfiekr
      301 krrlilwmdh mtshpvlsqy egfqhflscl ddkqwkmgkr raekdemvga sflltfqipt
      361 ehqdlqdved rvdtfkafsk kmddsvlqls tvaselvrkh vggfrkefqk lgnafqaish
      421 afqmdppfss ealnsaisht grtyemvgem faeqpkndlf rmldtlslyq gllsnfpdii
      481 hlqkgafakv kesqrmsdeg rmaqeeadgi rrrcrvvgfa lqaemnhfhq rreldfkhmm
      541 qnylrqqilf yqrvgqqlek tlrmydsl
//
LOCUS       XP_061014936             362 aa            linear   MAM 02-DEC-2023
DEFINITION  snurportin-1 [Dama dama].
ACCESSION   XP_061014936
VERSION     XP_061014936.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158953.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..362
                     /product="snurportin-1"
                     /calculated_mol_wt=41116
     Region          25..64
                     /region_name="Snurportin1"
                     /note="pfam11538"
                     /db_xref="CDD:402920"
     Region          98..282
                     /region_name="Snurportin-1_C"
                     /note="C-terminal m3G cap-binding domain of nuclear import
                     adaptor snurportin-1; cd09232"
                     /db_xref="CDD:185717"
     Site            order(101,127,144..146,148,178,229,255,280)
                     /site_type="other"
                     /note="exportin 1 interface"
                     /db_xref="CDD:185717"
     Site            order(105..108,128..130,145,257,260,278)
                     /site_type="other"
                     /note="m3G-cap binding site"
                     /db_xref="CDD:185717"
     CDS             1..362
                     /gene="SNUPN"
                     /coded_by="XM_061158953.1:132..1220"
                     /db_xref="GeneID:133067912"
ORIGIN      
        1 meelsqalag sfsvsqdlns taaphprlsq ykskyssleq serrrqllel qklkrldyvn
       61 harrlaeddw tgmeseeeee kkddeemevd tgkklpkrya nqlmlsewli dvpsdlgqew
      121 ivvvcpvgkr alivasqgst saytksgycv nrfssllpgg nrrnsttakd ytildciyne
      181 vnqtyyvldv mcwrghpfyd cqtdfrfywm hsklpeeegl gektklnpfk fvglknfpct
      241 peslckvlsm dfpfevdgll fyhkqahysp gstplvgwlr pymvsdvlgv avpigplttk
      301 peyagyqlqq iiehkksqke gvmgkltpra sengcyeleh lstptlkspp qspshpeslm
      361 en
//
LOCUS       XP_061014937             362 aa            linear   MAM 02-DEC-2023
DEFINITION  snurportin-1 [Dama dama].
ACCESSION   XP_061014937
VERSION     XP_061014937.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158954.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..362
                     /product="snurportin-1"
                     /calculated_mol_wt=41116
     Region          25..64
                     /region_name="Snurportin1"
                     /note="pfam11538"
                     /db_xref="CDD:402920"
     Region          98..282
                     /region_name="Snurportin-1_C"
                     /note="C-terminal m3G cap-binding domain of nuclear import
                     adaptor snurportin-1; cd09232"
                     /db_xref="CDD:185717"
     Site            order(101,127,144..146,148,178,229,255,280)
                     /site_type="other"
                     /note="exportin 1 interface"
                     /db_xref="CDD:185717"
     Site            order(105..108,128..130,145,257,260,278)
                     /site_type="other"
                     /note="m3G-cap binding site"
                     /db_xref="CDD:185717"
     CDS             1..362
                     /gene="SNUPN"
                     /coded_by="XM_061158954.1:138..1226"
                     /db_xref="GeneID:133067912"
ORIGIN      
        1 meelsqalag sfsvsqdlns taaphprlsq ykskyssleq serrrqllel qklkrldyvn
       61 harrlaeddw tgmeseeeee kkddeemevd tgkklpkrya nqlmlsewli dvpsdlgqew
      121 ivvvcpvgkr alivasqgst saytksgycv nrfssllpgg nrrnsttakd ytildciyne
      181 vnqtyyvldv mcwrghpfyd cqtdfrfywm hsklpeeegl gektklnpfk fvglknfpct
      241 peslckvlsm dfpfevdgll fyhkqahysp gstplvgwlr pymvsdvlgv avpigplttk
      301 peyagyqlqq iiehkksqke gvmgkltpra sengcyeleh lstptlkspp qspshpeslm
      361 en
//
LOCUS       XP_061014938             593 aa            linear   MAM 02-DEC-2023
DEFINITION  tyrosine-protein phosphatase non-receptor type 9 [Dama dama].
ACCESSION   XP_061014938
VERSION     XP_061014938.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158955.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..593
                     /product="tyrosine-protein phosphatase non-receptor type
                     9"
                     /calculated_mol_wt=68109
     Region          20..68
                     /region_name="CRAL_TRIO_N"
                     /note="CRAL/TRIO, N-terminal domain; smart01100"
                     /db_xref="CDD:215024"
     Region          90..240
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     Region          299..569
                     /region_name="PTPc-N9"
                     /note="catalytic domain of tyrosine-protein phosphatase
                     non-receptor type 9; cd14543"
                     /db_xref="CDD:350391"
     CDS             1..593
                     /gene="PTPN9"
                     /coded_by="XM_061158955.1:99..1880"
                     /db_xref="GeneID:133067913"
ORIGIN      
        1 mepatapqpd mapeltpeee qatkqfleei nkwtvqynvs plswnvavkf lmarkfdvlr
       61 aielfhsyre trrkegivkl kpheeplrse ilsgkftiln vrdptgasia lftarlhhph
      121 ksvqhvvlqa lfylldravd sfetqrnglv fiydmcgsny tnfeldlgkk vlnllkgafp
      181 arlkkvlivg apiwfrvpys iislllkdkv reriqilkts evtqhlprec lpenlggyvk
      241 idlatwnfqf lsqmnghpdp fdeiilfslp paldwdsvhv pdphamtiqe lmdyvstrqk
      301 rgiyeeyedi rrenpvgtfh csmspgnlek nrygdvpcld qtrvkltkrs ghtqtdyina
      361 sfmdgykqkn ayigtqgple ntyrdfwlmv weqkvlvivm ttrfeeggrr kcgqywplek
      421 dsrirfgflt vtnlgvenmt hykkttleih nteerqkrqv thfqflswpd ygvpssaasl
      481 idflravrnq qrlavssmga rakgqcpepp ivvhcsagig rtgtfcsldi claqleelgt
      541 lnvfqtvsrm rtqrafsiqt peqyyfcyka ilefaeregm vppshnllam egq
//
LOCUS       XP_061014939            1274 aa            linear   MAM 02-DEC-2023
DEFINITION  paired amphipathic helix protein Sin3a [Dama dama].
ACCESSION   XP_061014939
VERSION     XP_061014939.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158956.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1274
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1274
                     /product="paired amphipathic helix protein Sin3a"
                     /calculated_mol_wt=145028
     Region          5..1214
                     /region_name="Sin3"
                     /note="Histone deacetylase complex, regulatory component
                     SIN3 [Chromatin structure and dynamics]; COG5602"
                     /db_xref="CDD:227889"
     CDS             1..1274
                     /gene="SIN3A"
                     /coded_by="XM_061158956.1:212..4036"
                     /db_xref="GeneID:133067915"
ORIGIN      
        1 mkrrlddqes pvyaaqqrri pgsaeafphq hrvlapappv yeavsetmqs atgiqysvtp
       61 syqvsavpqs ssshgpaiaa vhsshhhpta vqphggqvvq shahpappva pvqgqqqfqr
      121 lkvedalsyl dqvklqfgsq pqvyndfldi mkefksqsid tpgvisrvsq lfkghpdlim
      181 gfntflppgy kievqtndmv nvttpgqvhq ipthgiqpqp qpppqhpsqp saqsapapaq
      241 papqpppakv skpsqlqaht pasqqtpplp pyasprsppv qphtpvtisl gtapplqnnq
      301 pvefnhainy vnkiknrfqg qpdiykafle ilhtyqkeqr nakeaggnyt palteqevya
      361 qvarlfknqe dllsefgqfl pdanssvlls kttaekvdsv rndhggtvkk pqlnnkpqrp
      421 sqngcqirrh sgtgatppvk kkpkllslkd ssmadaskhg vgteslffdk vrkalrsaea
      481 yenflrclvi fnqevisrae lvqlvspflg kfpelfnwfk nflgykesvh letfpkerat
      541 egiameidya sckrlgssyr alpksyqqpk ctgrtplcke vlndtwvsfp swsedstfvs
      601 skktqyeehi yrcederfel dvvletnlat irvleaiqkk lsrlsaeeqa kfrldntlgg
      661 tsevihrkal qriyadkaad iidglrknps iavpivlkrl kmkeeewrea qrgfnkvwre
      721 qnekyylksl dhqginfkqn dtkvlrsksl lneiesiyde rqeqateena gvpvgphlsl
      781 ayedkqiled aaaliihhvk rqtgiqkedk ykikqimhhf ipdllfaqrg dlsdveeeee
      841 eemdvdeatg aakkhngvgg sppkskllfs ntaaqklrgm devynlfyvn nnwyifmrlh
      901 qilclrllri csqaerqiee enrerewere vlgikrdksd spaiqlrlke pmdvdvedyy
      961 pafldmvrsl ldgnidssqy edslremfti hayiaftmdk liqsivrqlq hivsdeicvq
     1021 vtdlylaenn ngatggqlnt qtsrsllest yqrkaeqlms dencfklmfi qsqgqvqlti
     1081 elldteeens ddpveaerws dyverymnsd ttspelrehl arkpvflprn lrrirkcqrg
     1141 reqqekegke gnskktmena dsldklecrf klnsykmvyv iksedymyrr tallrahqsh
     1201 ervskrlhqr fqawvdkwtk ehvpremaae tskwlmgegl eglvpctttc dtetlhfvsi
     1261 nkyrvkygtv fktp
//
LOCUS       XP_061014940            1274 aa            linear   MAM 02-DEC-2023
DEFINITION  paired amphipathic helix protein Sin3a [Dama dama].
ACCESSION   XP_061014940
VERSION     XP_061014940.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158957.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1274
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1274
                     /product="paired amphipathic helix protein Sin3a"
                     /calculated_mol_wt=145028
     Region          5..1214
                     /region_name="Sin3"
                     /note="Histone deacetylase complex, regulatory component
                     SIN3 [Chromatin structure and dynamics]; COG5602"
                     /db_xref="CDD:227889"
     CDS             1..1274
                     /gene="SIN3A"
                     /coded_by="XM_061158957.1:59..3883"
                     /db_xref="GeneID:133067915"
ORIGIN      
        1 mkrrlddqes pvyaaqqrri pgsaeafphq hrvlapappv yeavsetmqs atgiqysvtp
       61 syqvsavpqs ssshgpaiaa vhsshhhpta vqphggqvvq shahpappva pvqgqqqfqr
      121 lkvedalsyl dqvklqfgsq pqvyndfldi mkefksqsid tpgvisrvsq lfkghpdlim
      181 gfntflppgy kievqtndmv nvttpgqvhq ipthgiqpqp qpppqhpsqp saqsapapaq
      241 papqpppakv skpsqlqaht pasqqtpplp pyasprsppv qphtpvtisl gtapplqnnq
      301 pvefnhainy vnkiknrfqg qpdiykafle ilhtyqkeqr nakeaggnyt palteqevya
      361 qvarlfknqe dllsefgqfl pdanssvlls kttaekvdsv rndhggtvkk pqlnnkpqrp
      421 sqngcqirrh sgtgatppvk kkpkllslkd ssmadaskhg vgteslffdk vrkalrsaea
      481 yenflrclvi fnqevisrae lvqlvspflg kfpelfnwfk nflgykesvh letfpkerat
      541 egiameidya sckrlgssyr alpksyqqpk ctgrtplcke vlndtwvsfp swsedstfvs
      601 skktqyeehi yrcederfel dvvletnlat irvleaiqkk lsrlsaeeqa kfrldntlgg
      661 tsevihrkal qriyadkaad iidglrknps iavpivlkrl kmkeeewrea qrgfnkvwre
      721 qnekyylksl dhqginfkqn dtkvlrsksl lneiesiyde rqeqateena gvpvgphlsl
      781 ayedkqiled aaaliihhvk rqtgiqkedk ykikqimhhf ipdllfaqrg dlsdveeeee
      841 eemdvdeatg aakkhngvgg sppkskllfs ntaaqklrgm devynlfyvn nnwyifmrlh
      901 qilclrllri csqaerqiee enrerewere vlgikrdksd spaiqlrlke pmdvdvedyy
      961 pafldmvrsl ldgnidssqy edslremfti hayiaftmdk liqsivrqlq hivsdeicvq
     1021 vtdlylaenn ngatggqlnt qtsrsllest yqrkaeqlms dencfklmfi qsqgqvqlti
     1081 elldteeens ddpveaerws dyverymnsd ttspelrehl arkpvflprn lrrirkcqrg
     1141 reqqekegke gnskktmena dsldklecrf klnsykmvyv iksedymyrr tallrahqsh
     1201 ervskrlhqr fqawvdkwtk ehvpremaae tskwlmgegl eglvpctttc dtetlhfvsi
     1261 nkyrvkygtv fktp
//
LOCUS       XP_061014941            1041 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-mannosidase 2C1 isoform X1 [Dama dama].
ACCESSION   XP_061014941
VERSION     XP_061014941.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158958.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1041
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1041
                     /product="alpha-mannosidase 2C1 isoform X1"
                     /calculated_mol_wt=115803
     Region          248..1034
                     /region_name="MngB"
                     /note="Alpha-mannosidase [Carbohydrate transport and
                     metabolism]; COG0383"
                     /db_xref="CDD:440152"
     CDS             1..1041
                     /gene="MAN2C1"
                     /coded_by="XM_061158958.1:251..3376"
                     /db_xref="GeneID:133067916"
ORIGIN      
        1 maaaapalkh wrttlervek fvsplyftdc nlrgrlfgds cpvaelssfl tperlpyeea
       61 vqqdfrpaqv gdsfgptwwt cwfrveltip eawvgqevhl rwesdgeglv wrdgepvqgl
      121 tkegektsyi ltdklgekdp rsltlyveva cngllgagkg smiaapdpek mfqvsraela
      181 vfhrdvykll vdlelllgia kglgednqrs fqalytanqm vnvcdpaqpe tfpvaqalas
      241 kffgqrgges qhtihamghc hidtawlwpf ketvrkcars wvtvvqlmer npefifacsq
      301 aqqlewvrsy ypglharlqe facrgqfvpv ggtwvemdgn lpsgesmvrq flqgqnffrq
      361 efgkmcsefw lpdtfgysaq lpqimrscgi krfltqklsw nlvnsfphht ffwegldgsq
      421 vlahfppgds ygmqgsveev lktvaknrdk grtnhsaflf gfgdggggpt qtmvdrlkrl
      481 cntdglprvq lssperlfsa leghseqlct wvgelflelh ngtytthaqi kkgnreceri
      541 lhdvellssl alarsaqfly paallqdlwr lllltqfhdv vtgsciqlva eeaichyedi
      601 rshgntllsa aaaalcagep gpegllivnt lpwkrtevla lprsggahsl alvtvpsmgf
      661 apaptptslq pllpqqpvfv vqetdssvtl dngiirvrld ptgrltslvl vasgreavae
      721 gaignqfvlf ddvplywdaw dvmdyhletr kpvlgqagtl avgteggvrg sawfllqisp
      781 nsrlsqevvl dvgcpyvrfh tevhwheahk flkvefparv rspqatyevq fghlqrpthy
      841 ntswdwarfe vwahrwmdls ehgfglalln dckygasvrg nvlslsllra pkspdatvdm
      901 grheftyalm phkgsfqdag vipaayslnf pllalpapgp apaaawsafs vsspavvlet
      961 vkqaetspqg rtlllrlyea hgshtdcwlh tslpvqeavl cdllerrdpt gplllrdnrl
     1021 kltftpfqvq slllvlqppp n
//
LOCUS       XP_061014942            1009 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-mannosidase 2C1 isoform X2 [Dama dama].
ACCESSION   XP_061014942
VERSION     XP_061014942.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158959.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1009
                     /product="alpha-mannosidase 2C1 isoform X2"
                     /calculated_mol_wt=112258
     Region          248..1002
                     /region_name="MngB"
                     /note="Alpha-mannosidase [Carbohydrate transport and
                     metabolism]; COG0383"
                     /db_xref="CDD:440152"
     CDS             1..1009
                     /gene="MAN2C1"
                     /coded_by="XM_061158959.1:252..3281"
                     /db_xref="GeneID:133067916"
ORIGIN      
        1 maaaapalkh wrttlervek fvsplyftdc nlrgrlfgds cpvaelssfl tperlpyeea
       61 vqqdfrpaqv gdsfgptwwt cwfrveltip eawvgqevhl rwesdgeglv wrdgepvqgl
      121 tkegektsyi ltdklgekdp rsltlyveva cngllgagkg smiaapdpek mfqvsraela
      181 vfhrdvykll vdlelllgia kglgednqrs fqalytanqm vnvcdpaqpe tfpvaqalas
      241 kffgqrgges qhtihamghc hidtawlwpf ketvrkcars wvtvvqlmer npefifacsq
      301 aqqlewvrsy ypglharlqe facrgqfvpv ggtwvemdgn lpsgesmvrq flqgqnffrq
      361 efgkmcsefw lpdtfgysaq lpqimrscgi krfltqklsw nlvnsfpvlk tvaknrdkgr
      421 tnhsaflfgf gdggggptqt mvdrlkrlcn tdglprvqls sperlfsale ghseqlctwv
      481 gelflelhng tytthaqikk gnrecerilh dvellsslal arsaqflypa allqdlwrll
      541 lltqfhdvvt gsciqlvaee aichyedirs hgntllsaaa aalcagepgp egllivntlp
      601 wkrtevlalp rsggahslal vtvpsmgfap aptptslqpl lpqqpvfvvq etdssvtldn
      661 giirvrldpt grltslvlva sgreavaega ignqfvlfdd vplywdawdv mdyhletrkp
      721 vlgqagtlav gteggvrgsa wfllqispns rlsqevvldv gcpyvrfhte vhwheahkfl
      781 kvefparvrs pqatyevqfg hlqrpthynt swdwarfevw ahrwmdlseh gfglallndc
      841 kygasvrgnv lslsllrapk spdatvdmgr heftyalmph kgsfqdagvi paayslnfpl
      901 lalpapgpap aaawsafsvs spavvletvk qaetspqgrt lllrlyeahg shtdcwlhts
      961 lpvqeavlcd llerrdptgp lllrdnrlkl tftpfqvqsl llvlqpppn
//
LOCUS       XP_061014944             867 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-mannosidase 2C1 isoform X3 [Dama dama].
ACCESSION   XP_061014944
VERSION     XP_061014944.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158961.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..867
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..867
                     /product="alpha-mannosidase 2C1 isoform X3"
                     /calculated_mol_wt=96270
     Region          74..860
                     /region_name="MngB"
                     /note="Alpha-mannosidase [Carbohydrate transport and
                     metabolism]; COG0383"
                     /db_xref="CDD:440152"
     CDS             1..867
                     /gene="MAN2C1"
                     /coded_by="XM_061158961.1:125..2728"
                     /db_xref="GeneID:133067916"
ORIGIN      
        1 mstsslwtws scwasprwgl sgrtllqglg ednqrsfqal ytanqmvnvc dpaqpetfpv
       61 aqalaskffg qrggesqhti hamghchidt awlwpfketv rkcarswvtv vqlmernpef
      121 ifacsqaqql ewvrsyypgl harlqefacr gqfvpvggtw vemdgnlpsg esmvrqflqg
      181 qnffrqefgk mcsefwlpdt fgysaqlpqi mrscgikrfl tqklswnlvn sfphhtffwe
      241 gldgsqvlah fppgdsygmq gsveevlktv aknrdkgrtn hsaflfgfgd ggggptqtmv
      301 drlkrlcntd glprvqlssp erlfsalegh seqlctwvge lflelhngty tthaqikkgn
      361 recerilhdv ellsslalar saqflypaal lqdlwrllll tqfhdvvtgs ciqlvaeeai
      421 chyedirshg ntllsaaaaa lcagepgpeg llivntlpwk rtevlalprs ggahslalvt
      481 vpsmgfapap tptslqpllp qqpvfvvqet dssvtldngi irvrldptgr ltslvlvasg
      541 reavaegaig nqfvlfddvp lywdawdvmd yhletrkpvl gqagtlavgt eggvrgsawf
      601 llqispnsrl sqevvldvgc pyvrfhtevh wheahkflkv efparvrspq atyevqfghl
      661 qrpthyntsw dwarfevwah rwmdlsehgf glallndcky gasvrgnvls lsllrapksp
      721 datvdmgrhe ftyalmphkg sfqdagvipa ayslnfplla lpapgpapaa awsafsvssp
      781 avvletvkqa etspqgrtll lrlyeahgsh tdcwlhtslp vqeavlcdll errdptgpll
      841 lrdnrlkltf tpfqvqslll vlqpppn
//
LOCUS       XP_061014945            1064 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-mannosidase 2C1 isoform X4 [Dama dama].
ACCESSION   XP_061014945
VERSION     XP_061014945.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158962.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1064
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1064
                     /product="alpha-mannosidase 2C1 isoform X4"
                     /calculated_mol_wt=117964
     Region          248..1057
                     /region_name="MngB"
                     /note="Alpha-mannosidase [Carbohydrate transport and
                     metabolism]; COG0383"
                     /db_xref="CDD:440152"
     CDS             1..1064
                     /gene="MAN2C1"
                     /coded_by="XM_061158962.1:255..3449"
                     /db_xref="GeneID:133067916"
ORIGIN      
        1 maaaapalkh wrttlervek fvsplyftdc nlrgrlfgds cpvaelssfl tperlpyeea
       61 vqqdfrpaqv gdsfgptwwt cwfrveltip eawvgqevhl rwesdgeglv wrdgepvqgl
      121 tkegektsyi ltdklgekdp rsltlyveva cngllgagkg smiaapdpek mfqvsraela
      181 vfhrdvykll vdlelllgia kglgednqrs fqalytanqm vnvcdpaqpe tfpvaqalas
      241 kffgqrgges qhtihamghc hidtawlwpf ketvrkcars wvtvvqlmer npefifacsq
      301 aqqlewvrsy ypglharlqe facrgqfvpv ggtwvemdgn lpsgesmvrq flqgqnffrq
      361 efgkmcsefw lpdtfgysaq lpqimrscgi krfltqklsw nlvnsfphht ffwegldgsq
      421 vlahfppgds ygmqgsveev lktvaknrdk grtnhsaflf gfgdggggpt qtmvdrlkrl
      481 cntdglprvq lssperlfsa leghseqlct wvgelflelh ngtytthaqi kkgnreceri
      541 lhdvellssl alarsaqfly paallqdlwr lllltqfhdv vtgsciqlva eeaichyedi
      601 rshgntllsa aaaalcagep gpegllivnt lpwkrtevla lprsggahsl gmswgegllp
      661 spghcpqhgl cscshphlta apaapaacvr sarapadlas rppptktdss vtldngiirv
      721 rldptgrlts lvlvasgrea vaegaignqf vlfddvplyw dawdvmdyhl etrkpvlgqa
      781 gtlavgtegg vrgsawfllq ispnsrlsqe vvldvgcpyv rfhtevhwhe ahkflkvefp
      841 arvrspqaty evqfghlqrp thyntswdwa rfevwahrwm dlsehgfgla llndckygas
      901 vrgnvlslsl lrapkspdat vdmgrhefty almphkgsfq dagvipaays lnfpllalpa
      961 pgpapaaaws afsvsspavv letvkqaets pqgrtlllrl yeahgshtdc wlhtslpvqe
     1021 avlcdllerr dptgplllrd nrlkltftpf qvqslllvlq pppn
//
LOCUS       XP_061014946             398 aa            linear   MAM 02-DEC-2023
DEFINITION  endonuclease 8-like 1 isoform X1 [Dama dama].
ACCESSION   XP_061014946
VERSION     XP_061014946.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158963.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..398
                     /product="endonuclease 8-like 1 isoform X1"
                     /calculated_mol_wt=44057
     Region          1..127
                     /region_name="FpgNei_N"
                     /note="N-terminal domain of Fpg (formamidopyrimidine-DNA
                     glycosylase, MutM)_Nei (endonuclease VIII) base-excision
                     repair DNA glycosylases; cl03119"
                     /db_xref="CDD:470740"
     Site            order(2..3,54,78,80..82,95..96)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176798"
     Site            2
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:176798"
     Site            order(3..6,8..9,12,51..55)
                     /site_type="other"
                     /note="H2TH interface [polypeptide binding]"
                     /db_xref="CDD:176798"
     Site            order(3,54)
                     /site_type="active"
                     /note="putative catalytic residues [active]"
                     /db_xref="CDD:176798"
     Region          52..>205
                     /region_name="PRK14811"
                     /note="formamidopyrimidine-DNA glycosylase; Provisional"
                     /db_xref="CDD:184831"
     Region          260..298
                     /region_name="Neil1-DNA_bind"
                     /note="Endonuclease VIII-like 1, DNA bind; pfam09292"
                     /db_xref="CDD:462745"
     CDS             1..398
                     /gene="NEIL1"
                     /coded_by="XM_061158963.1:157..1353"
                     /db_xref="GeneID:133067917"
ORIGIN      
        1 mpegpelhla sqfvneacre lvfggcveks pvsrnpevpf essaygisal argkelrltl
       61 splpgaqppr eplalvfrfg mtgsfqlvps dalpphahlr fytappgprl alcfvdirrf
      121 grwdlggewq pgrgpcvlle yeqfrenvlr nladkafdrp icealldqrf fngignylra
      181 eilyrlripp fekartvlea lqqrrpvlpl pllqspeltl sqkiraklqn pdllelchsv
      241 pkevvqlggk gygsesgeed faafrawlrc ysapgmsslr drhgrtiwfq gdpgplapkg
      301 gksrkkksqg aqqgpedrae dppspnkaps rtrraqrglp kqttaqvpeg tslhqdpeap
      361 pvpdtgkrrr qpapsgrrrt rktkadtpsl epegtlas
//
LOCUS       XP_061014947             398 aa            linear   MAM 02-DEC-2023
DEFINITION  endonuclease 8-like 1 isoform X1 [Dama dama].
ACCESSION   XP_061014947
VERSION     XP_061014947.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158964.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..398
                     /product="endonuclease 8-like 1 isoform X1"
                     /calculated_mol_wt=44057
     Region          1..127
                     /region_name="FpgNei_N"
                     /note="N-terminal domain of Fpg (formamidopyrimidine-DNA
                     glycosylase, MutM)_Nei (endonuclease VIII) base-excision
                     repair DNA glycosylases; cl03119"
                     /db_xref="CDD:470740"
     Site            order(2..3,54,78,80..82,95..96)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176798"
     Site            2
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:176798"
     Site            order(3..6,8..9,12,51..55)
                     /site_type="other"
                     /note="H2TH interface [polypeptide binding]"
                     /db_xref="CDD:176798"
     Site            order(3,54)
                     /site_type="active"
                     /note="putative catalytic residues [active]"
                     /db_xref="CDD:176798"
     Region          52..>205
                     /region_name="PRK14811"
                     /note="formamidopyrimidine-DNA glycosylase; Provisional"
                     /db_xref="CDD:184831"
     Region          260..298
                     /region_name="Neil1-DNA_bind"
                     /note="Endonuclease VIII-like 1, DNA bind; pfam09292"
                     /db_xref="CDD:462745"
     CDS             1..398
                     /gene="NEIL1"
                     /coded_by="XM_061158964.1:372..1568"
                     /db_xref="GeneID:133067917"
ORIGIN      
        1 mpegpelhla sqfvneacre lvfggcveks pvsrnpevpf essaygisal argkelrltl
       61 splpgaqppr eplalvfrfg mtgsfqlvps dalpphahlr fytappgprl alcfvdirrf
      121 grwdlggewq pgrgpcvlle yeqfrenvlr nladkafdrp icealldqrf fngignylra
      181 eilyrlripp fekartvlea lqqrrpvlpl pllqspeltl sqkiraklqn pdllelchsv
      241 pkevvqlggk gygsesgeed faafrawlrc ysapgmsslr drhgrtiwfq gdpgplapkg
      301 gksrkkksqg aqqgpedrae dppspnkaps rtrraqrglp kqttaqvpeg tslhqdpeap
      361 pvpdtgkrrr qpapsgrrrt rktkadtpsl epegtlas
//
LOCUS       XP_061014948             390 aa            linear   MAM 02-DEC-2023
DEFINITION  endonuclease 8-like 1 isoform X2 [Dama dama].
ACCESSION   XP_061014948
VERSION     XP_061014948.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158965.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..390
                     /product="endonuclease 8-like 1 isoform X2"
                     /calculated_mol_wt=43183
     Region          1..127
                     /region_name="FpgNei_N"
                     /note="N-terminal domain of Fpg (formamidopyrimidine-DNA
                     glycosylase, MutM)_Nei (endonuclease VIII) base-excision
                     repair DNA glycosylases; cl03119"
                     /db_xref="CDD:470740"
     Site            order(2..3,54,78,80..82,95..96)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176798"
     Site            2
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:176798"
     Site            order(3..6,8..9,12,51..55)
                     /site_type="other"
                     /note="H2TH interface [polypeptide binding]"
                     /db_xref="CDD:176798"
     Site            order(3,54)
                     /site_type="active"
                     /note="putative catalytic residues [active]"
                     /db_xref="CDD:176798"
     Region          52..>205
                     /region_name="PRK14811"
                     /note="formamidopyrimidine-DNA glycosylase; Provisional"
                     /db_xref="CDD:184831"
     Region          252..290
                     /region_name="Neil1-DNA_bind"
                     /note="Endonuclease VIII-like 1, DNA bind; pfam09292"
                     /db_xref="CDD:462745"
     CDS             1..390
                     /gene="NEIL1"
                     /coded_by="XM_061158965.1:327..1499"
                     /db_xref="GeneID:133067917"
ORIGIN      
        1 mpegpelhla sqfvneacre lvfggcveks pvsrnpevpf essaygisal argkelrltl
       61 splpgaqppr eplalvfrfg mtgsfqlvps dalpphahlr fytappgprl alcfvdirrf
      121 grwdlggewq pgrgpcvlle yeqfrenvlr nladkafdrp icealldqrf fngignylra
      181 eilyrlripp fekartvlea lqqrrpspel tlsqkirakl qnpdllelch svpkevvqlg
      241 gkgygsesge edfaafrawl rcysapgmss lrdrhgrtiw fqgdpgplap kggksrkkks
      301 qgaqqgpedr aedppspnka psrtrraqrg lpkqttaqvp egtslhqdpe appvpdtgkr
      361 rrqpapsgrr rtrktkadtp slepegtlas
//
LOCUS       XP_061014949             383 aa            linear   MAM 02-DEC-2023
DEFINITION  endonuclease 8-like 1 isoform X3 [Dama dama].
ACCESSION   XP_061014949
VERSION     XP_061014949.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158966.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..383
                     /product="endonuclease 8-like 1 isoform X3"
                     /calculated_mol_wt=41805
     Region          1..127
                     /region_name="FpgNei_N"
                     /note="N-terminal domain of Fpg (formamidopyrimidine-DNA
                     glycosylase, MutM)_Nei (endonuclease VIII) base-excision
                     repair DNA glycosylases; cl03119"
                     /db_xref="CDD:470740"
     Site            order(2..3,54,78,80..82,95..96)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176798"
     Site            2
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:176798"
     Site            order(3..6,8..9,12,51..55)
                     /site_type="other"
                     /note="H2TH interface [polypeptide binding]"
                     /db_xref="CDD:176798"
     Site            order(3,54)
                     /site_type="active"
                     /note="putative catalytic residues [active]"
                     /db_xref="CDD:176798"
     Region          <134..>194
                     /region_name="PRK10445"
                     /note="endonuclease VIII; Provisional"
                     /db_xref="CDD:182467"
     CDS             1..383
                     /gene="NEIL1"
                     /coded_by="XM_061158966.1:332..1483"
                     /db_xref="GeneID:133067917"
ORIGIN      
        1 mpegpelhla sqfvneacre lvfggcveks pvsrnpevpf essaygisal argkelrltl
       61 splpgaqppr eplalvfrfg mtgsfqlvps dalpphahlr fytappgprl alcfvdirrf
      121 grwdlggewq pgrgpcvlle yeqfrenvlr nladkafdrp icealldqrf fngignylra
      181 eilyrlripp fekartvlea lqqrrpvrvp ggmrlhlsgr qtrvgagsgv cgsaragptp
      241 apspepgadp epedqgqaae prpagavplg aqgsgpaggi ldpwhpkgas parrsprehs
      301 rvlrteqrtl hlqtrllqgh eghreaflnr lqprcprgpa strtqkppqs ltqgrgggnq
      361 hpqaaaeper prltphpwsl rgp
//
LOCUS       XP_061014950             357 aa            linear   MAM 02-DEC-2023
DEFINITION  endonuclease 8-like 1 isoform X4 [Dama dama].
ACCESSION   XP_061014950
VERSION     XP_061014950.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158967.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..357
                     /product="endonuclease 8-like 1 isoform X4"
                     /calculated_mol_wt=39428
     Region          1..127
                     /region_name="FpgNei_N"
                     /note="N-terminal domain of Fpg (formamidopyrimidine-DNA
                     glycosylase, MutM)_Nei (endonuclease VIII) base-excision
                     repair DNA glycosylases; cl03119"
                     /db_xref="CDD:470740"
     Site            order(2..3,54,78,80..82,95..96)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176798"
     Site            2
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:176798"
     Site            order(3..6,8..9,12,51..55)
                     /site_type="other"
                     /note="H2TH interface [polypeptide binding]"
                     /db_xref="CDD:176798"
     Site            order(3,54)
                     /site_type="active"
                     /note="putative catalytic residues [active]"
                     /db_xref="CDD:176798"
     Region          <134..>194
                     /region_name="PRK10445"
                     /note="endonuclease VIII; Provisional"
                     /db_xref="CDD:182467"
     CDS             1..357
                     /gene="NEIL1"
                     /coded_by="XM_061158967.1:331..1404"
                     /db_xref="GeneID:133067917"
ORIGIN      
        1 mpegpelhla sqfvneacre lvfggcveks pvsrnpevpf essaygisal argkelrltl
       61 splpgaqppr eplalvfrfg mtgsfqlvps dalpphahlr fytappgprl alcfvdirrf
      121 grwdlggewq pgrgpcvlle yeqfrenvlr nladkafdrp icealldqrf fngignylra
      181 eilyrlripp fekartvlea lqqrrpvrvp ggmrlhlsep gadpepedqg qaaeprpaga
      241 vplgaqgsgp aggildpwhp kgasparrsp rehsrvlrte qrtlhlqtrl lqgheghrea
      301 flnrlqprcp rgpastrtqk ppqsltqgrg ggnqhpqaaa eperprltph pwslrgp
//
LOCUS       XP_061014951             345 aa            linear   MAM 02-DEC-2023
DEFINITION  endonuclease 8-like 1 isoform X5 [Dama dama].
ACCESSION   XP_061014951
VERSION     XP_061014951.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158968.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..345
                     /product="endonuclease 8-like 1 isoform X5"
                     /calculated_mol_wt=36872
     Region          1..127
                     /region_name="FpgNei_N"
                     /note="N-terminal domain of Fpg (formamidopyrimidine-DNA
                     glycosylase, MutM)_Nei (endonuclease VIII) base-excision
                     repair DNA glycosylases; cl03119"
                     /db_xref="CDD:470740"
     Site            order(2..3,54,78,80..82,95..96)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176798"
     Site            2
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:176798"
     Site            order(3..6,8..9,12,51..55)
                     /site_type="other"
                     /note="H2TH interface [polypeptide binding]"
                     /db_xref="CDD:176798"
     Site            order(3,54)
                     /site_type="active"
                     /note="putative catalytic residues [active]"
                     /db_xref="CDD:176798"
     Region          <134..>194
                     /region_name="PRK10445"
                     /note="endonuclease VIII; Provisional"
                     /db_xref="CDD:182467"
     CDS             1..345
                     /gene="NEIL1"
                     /coded_by="XM_061158968.1:334..1371"
                     /db_xref="GeneID:133067917"
ORIGIN      
        1 mpegpelhla sqfvneacre lvfggcveks pvsrnpevpf essaygisal argkelrltl
       61 splpgaqppr eplalvfrfg mtgsfqlvps dalpphahlr fytappgprl alcfvdirrf
      121 grwdlggewq pgrgpcvlle yeqfrenvlr nladkafdrp icealldqrf fngignylra
      181 eilyrlripp fekartvlea lqqrrpvrvp ggmrlhlsgr qtrvgagsgv cgsaragptp
      241 apspepgadp epedqgqaae prpagavplg aqgsgpaggq rlrvgerggg lcclpslaav
      301 lqctrhelpa gpawphhlvp ggswtpgtqr gqvpqeevpg stags
//
LOCUS       XP_061014952             319 aa            linear   MAM 02-DEC-2023
DEFINITION  endonuclease 8-like 1 isoform X6 [Dama dama].
ACCESSION   XP_061014952
VERSION     XP_061014952.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158969.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..319
                     /product="endonuclease 8-like 1 isoform X6"
                     /calculated_mol_wt=34496
     Region          1..127
                     /region_name="FpgNei_N"
                     /note="N-terminal domain of Fpg (formamidopyrimidine-DNA
                     glycosylase, MutM)_Nei (endonuclease VIII) base-excision
                     repair DNA glycosylases; cl03119"
                     /db_xref="CDD:470740"
     Site            order(2..3,54,78,80..82,95..96)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176798"
     Site            2
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:176798"
     Site            order(3..6,8..9,12,51..55)
                     /site_type="other"
                     /note="H2TH interface [polypeptide binding]"
                     /db_xref="CDD:176798"
     Site            order(3,54)
                     /site_type="active"
                     /note="putative catalytic residues [active]"
                     /db_xref="CDD:176798"
     Region          <134..>194
                     /region_name="PRK10445"
                     /note="endonuclease VIII; Provisional"
                     /db_xref="CDD:182467"
     CDS             1..319
                     /gene="NEIL1"
                     /coded_by="XM_061158969.1:333..1292"
                     /db_xref="GeneID:133067917"
ORIGIN      
        1 mpegpelhla sqfvneacre lvfggcveks pvsrnpevpf essaygisal argkelrltl
       61 splpgaqppr eplalvfrfg mtgsfqlvps dalpphahlr fytappgprl alcfvdirrf
      121 grwdlggewq pgrgpcvlle yeqfrenvlr nladkafdrp icealldqrf fngignylra
      181 eilyrlripp fekartvlea lqqrrpvrvp ggmrlhlsep gadpepedqg qaaeprpaga
      241 vplgaqgsgp aggqrlrvge rggglcclps laavlqctrh elpagpawph hlvpggswtp
      301 gtqrgqvpqe evpgstags
//
LOCUS       XP_061014953             199 aa            linear   MAM 02-DEC-2023
DEFINITION  COMM domain-containing protein 4 [Dama dama].
ACCESSION   XP_061014953
VERSION     XP_061014953.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158970.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..199
                     /product="COMM domain-containing protein 4"
                     /calculated_mol_wt=21592
     Region          25..198
                     /region_name="Commd4"
                     /note="COMM_Domain containing protein 4. The COMM Domain
                     is found at the C-terminus of a variety of proteins;
                     presumably all COMM_Domain containing proteins are located
                     in the nucleus and the COMM domain plays a role in
                     protein-protein interactions. Several...; cd04752"
                     /db_xref="CDD:240100"
     CDS             1..199
                     /gene="COMMD4"
                     /coded_by="XM_061158970.1:217..816"
                     /db_xref="GeneID:133067919"
ORIGIN      
        1 mrfrfcgdld cpdwvlaeis tlakissvkl rllcgqvlkd llgdgldyek ilkltadarf
       61 esgdvkatva vlsfilssaa khsvdgesls selqqlglpk ehaaslcrcy eekqsplqer
      121 lracslrvnr lvgvgwrvdy tlsssllrav eeplvhlrle vaaapgaptq pvamslsadk
      181 fqvllaelkq aqalmnnlg
//
LOCUS       XP_061014954            1048 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C15orf39 homolog isoform X1 [Dama dama].
ACCESSION   XP_061014954
VERSION     XP_061014954.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158971.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1048
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1048
                     /product="uncharacterized protein C15orf39 homolog isoform
                     X1"
                     /calculated_mol_wt=109916
     Region          1..1048
                     /region_name="DUF5525"
                     /note="Family of unknown function (DUF5525); pfam17663"
                     /db_xref="CDD:435956"
     CDS             1..1048
                     /gene="C13H15orf39"
                     /coded_by="XM_061158971.1:208..3354"
                     /db_xref="GeneID:133067920"
ORIGIN      
        1 maekrplgtl gpvmygklpr leadsgpghs lphsagnqdp csykgayfsc pmgappktgs
       61 erlaswtpyp plyptsmagp plrannllts cllyrpptes sekvqdsgpv ellpfgpqsh
      121 sypgpplaap kpvyrsplcy glstclgega pkkpldvdwt lvtgsllppv dpscslppas
      181 gkgqfldgtf lrgvpagasd kdssvsfspc qaflekyrtl hgtgflasky aspysgdpkq
      241 alsegppspw tqlaqplgpa cqdavpphyp lphptqpvpc ppacrhpekp ggygsvlplq
      301 plgahkgagy pagglnspyl rqqavqtpym ppvgldtyay psaplpapsp glkleppltp
      361 rcpldfapqt lgfpyaredl slygaspglg gtppsqnsvq alpkpgafqr acqplpasrp
      421 cseptrpaek pvqeaeekmw lpscrkeqpq pqpqprldeh pgapivigds pvprtppplp
      481 pcaqerqslp qnegslppss ppmpvidnvf slapyrdyld vpapeapaep epapapnesh
      541 dkdcgrslpa qeapssehps lkeevaldls vkktaaeasp tkvpptkvph pvgrakptas
      601 vdvpatgntv snvpgvgdtv sdprglqkav teapeppgvp vtteatprtn fhssvafmfr
      661 kfkiirpapl pattvpaaps lapapappap tptptpvppg lqmltqplpm acfgltlpsp
      721 pavamaspas apapapspap apalapapva gpspastpat adsseqhfag lhaslcdais
      781 gsvahsppek lrewletsgp wgraawqdcq gvqgllgkll sqlqsfvctq qcpfphvvra
      841 gaifvpihlv kerlfprlpp asvdhvlqeh rvelrpttls eeralreral hgctsrmlkl
      901 lalrqlpdiy pdllglqwrd cvrrqlgdfn tepgsvpsse stvareepgs ldltwksaap
      961 kakkpgrkps tpgpekaeat avggspgaap tpaagaslpg ptvkarfrsl lesawlngla
     1021 lptwghkasg pdrtaprpql lgsqshql
//
LOCUS       XP_061014955             939 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C15orf39 homolog isoform X2 [Dama dama].
ACCESSION   XP_061014955
VERSION     XP_061014955.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158972.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..939
                     /product="uncharacterized protein C15orf39 homolog isoform
                     X2"
                     /calculated_mol_wt=98654
     Region          1..928
                     /region_name="DUF5525"
                     /note="Family of unknown function (DUF5525); pfam17663"
                     /db_xref="CDD:435956"
     CDS             1..939
                     /gene="C13H15orf39"
                     /coded_by="XM_061158972.1:208..3027"
                     /db_xref="GeneID:133067920"
ORIGIN      
        1 maekrplgtl gpvmygklpr leadsgpghs lphsagnqdp csykgayfsc pmgappktgs
       61 erlaswtpyp plyptsmagp plrannllts cllyrpptes sekvqdsgpv ellpfgpqsh
      121 sypgpplaap kpvyrsplcy glstclgega pkkpldvdwt lvtgsllppv dpscslppas
      181 gkgqfldgtf lrgvpagasd kdssvsfspc qaflekyrtl hgtgflasky aspysgdpkq
      241 alsegppspw tqlaqplgpa cqdavpphyp lphptqpvpc ppacrhpekp ggygsvlplq
      301 plgahkgagy pagglnspyl rqqavqtpym ppvgldtyay psaplpapsp glkleppltp
      361 rcpldfapqt lgfpyaredl slygaspglg gtppsqnsvq alpkpgafqr acqplpasrp
      421 cseptrpaek pvqeaeekmw lpscrkeqpq pqpqprldeh pgapivigds pvprtppplp
      481 pcaqerqslp qnegslppss ppmpvidnvf slapyrdyld vpapeapaep epapapnesh
      541 dkdcgrslpa qeapssehps lkeevaldls vkktaaeasp tkvpptkvph pvgrakptas
      601 vdvpatgntv snvpgvgdtv sdprglqkav teapeppgvp vtteatprtn fhssvafmfr
      661 kfkiirpapl pattvpaaps lapapappap tptptpvppg lqmltqplpm acfgltlpsp
      721 pavamaspas apapapspap apalapapva gpspastpat adsseqhfag lhaslcdais
      781 gsvahsppek lrewletsgp wgraawqdcq gvqgllgkll sqlqsfvctq qcpfphvvra
      841 gaifvpihlv kerlfprlpp asvdhvlqeh rvelrpttls eeralreral hgctsrmlkl
      901 lalrqlpdiy pdllglqwrd cvrrqlgehg atpvaagav
//
LOCUS       XP_061014956             216 aa            linear   MAM 02-DEC-2023
DEFINITION  GTP-binding nuclear protein Ran-like [Dama dama].
ACCESSION   XP_061014956
VERSION     XP_061014956.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158973.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..216
                     /product="GTP-binding nuclear protein Ran-like"
                     /calculated_mol_wt=24360
     Region          16..215
                     /region_name="RAN"
                     /note="Ran (Ras-related nuclear proteins) /TC4 subfamily
                     of small GTPases; smart00176"
                     /db_xref="CDD:128473"
     CDS             1..216
                     /gene="LOC133067921"
                     /coded_by="XM_061158973.1:20..670"
                     /db_xref="GeneID:133067921"
ORIGIN      
        1 mpaqgepqvq fklvlvgdgg tgkttfvkrh ltgefekkyv atlgvevhpl vfhtnrgpik
       61 fnvwdtagqe kfgglrdgyy iqaqcaiimf dvtsrvtykn vpnwhrdlvr vcenipivlc
      121 gnkvdikdrk ikarsivfhr kknlqyydis aksnynfekp flwlarklig dpnlefvamp
      181 alappevvmd palaaqyehd levaqttalp dedddl
//
LOCUS       XP_061014957             269 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphopantothenoylcysteine decarboxylase isoform X1 [Dama dama].
ACCESSION   XP_061014957
VERSION     XP_061014957.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158974.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..269
                     /product="phosphopantothenoylcysteine decarboxylase
                     isoform X1"
                     /calculated_mol_wt=30208
     Region          21..194
                     /region_name="Flavoprotein"
                     /note="cl19190"
                     /db_xref="CDD:450266"
     CDS             1..269
                     /gene="PPCDC"
                     /coded_by="XM_061158974.1:112..921"
                     /db_xref="GeneID:133067922"
ORIGIN      
        1 mepnsgrlpg leatrphmep raacsaaapl rrpfhvlvgv tgsvaalklp vlvsklldip
       61 dlkvavvtte rakhfysprd vpvtlysdad ewemwkcrsd pvlhidlrrw adlmlvapld
      121 antlgkvasg icdnlltcvi rawdrskpll fcpamntamw ehpiteqqvg qlkafgyiei
      181 pcvakklvcg dqgsyrrmcs spqkginqer rnkdpllriw rqeewnflqe sqviqrgclc
      241 dfpslpcptp tlafvnewcg lcceekkkk
//
LOCUS       XP_061014958             269 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphopantothenoylcysteine decarboxylase isoform X1 [Dama dama].
ACCESSION   XP_061014958
VERSION     XP_061014958.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158975.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..269
                     /product="phosphopantothenoylcysteine decarboxylase
                     isoform X1"
                     /calculated_mol_wt=30208
     Region          21..194
                     /region_name="Flavoprotein"
                     /note="cl19190"
                     /db_xref="CDD:450266"
     CDS             1..269
                     /gene="PPCDC"
                     /coded_by="XM_061158975.1:134..943"
                     /db_xref="GeneID:133067922"
ORIGIN      
        1 mepnsgrlpg leatrphmep raacsaaapl rrpfhvlvgv tgsvaalklp vlvsklldip
       61 dlkvavvtte rakhfysprd vpvtlysdad ewemwkcrsd pvlhidlrrw adlmlvapld
      121 antlgkvasg icdnlltcvi rawdrskpll fcpamntamw ehpiteqqvg qlkafgyiei
      181 pcvakklvcg dqgsyrrmcs spqkginqer rnkdpllriw rqeewnflqe sqviqrgclc
      241 dfpslpcptp tlafvnewcg lcceekkkk
//
LOCUS       XP_061014959             220 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphopantothenoylcysteine decarboxylase isoform X2 [Dama dama].
ACCESSION   XP_061014959
VERSION     XP_061014959.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158976.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..220
                     /product="phosphopantothenoylcysteine decarboxylase
                     isoform X2"
                     /calculated_mol_wt=23947
     Region          21..220
                     /region_name="Flavoprotein"
                     /note="cl19190"
                     /db_xref="CDD:450266"
     CDS             1..220
                     /gene="PPCDC"
                     /coded_by="XM_061158976.1:43..705"
                     /db_xref="GeneID:133067922"
ORIGIN      
        1 mepnsgrlpg leatrphmep raacsaaapl rrpfhvlvgv tgsvaalklp vlvsklldip
       61 dlkvavvtte rakhfysprd vpvtlysdad ewemwkcrsd pvlhidlrrw adlmlvapld
      121 antlgkvasg icdnlltcvi rawdrskpll fcpamntamw ehpiteqqvg qlkafgyiei
      181 pcvakklvcg dqgmgamaev gtivdkvkev lsqhggsqqs
//
LOCUS       XP_061014960             201 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphopantothenoylcysteine decarboxylase isoform X3 [Dama dama].
ACCESSION   XP_061014960
VERSION     XP_061014960.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158977.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..201
                     /product="phosphopantothenoylcysteine decarboxylase
                     isoform X3"
                     /calculated_mol_wt=21981
     Region          21..191
                     /region_name="Flavoprotein"
                     /note="cl19190"
                     /db_xref="CDD:450266"
     CDS             1..201
                     /gene="PPCDC"
                     /coded_by="XM_061158977.1:44..649"
                     /db_xref="GeneID:133067922"
ORIGIN      
        1 mepnsgrlpg leatrphmep raacsaaapl rrpfhvlvgv tgsvaalklp vlvsklldip
       61 dlkvavvtte rakhfysprd vpvtlysdad ewemwkcrsd pvlhidlrrw adlmlvapld
      121 antlgkvasg icdnlltcvi rawdrskpll fcpamntamw ehpiteqqvg qlkafgyiei
      181 pcvakklvcg dqvslgchgc c
//
LOCUS       XP_061014961             200 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphopantothenoylcysteine decarboxylase isoform X4 [Dama dama].
ACCESSION   XP_061014961
VERSION     XP_061014961.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158978.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..200
                     /product="phosphopantothenoylcysteine decarboxylase
                     isoform X4"
                     /calculated_mol_wt=21901
     Region          21..193
                     /region_name="Flavoprotein"
                     /note="cl19190"
                     /db_xref="CDD:450266"
     CDS             1..200
                     /gene="PPCDC"
                     /coded_by="XM_061158978.1:43..645"
                     /db_xref="GeneID:133067922"
ORIGIN      
        1 mepnsgrlpg leatrphmep raacsaaapl rrpfhvlvgv tgsvaalklp vlvsklldip
       61 dlkvavvtte rakhfysprd vpvtlysdad ewemwkcrsd pvlhidlrrw adlmlvapld
      121 antlgkvasg icdnlltcvi rawdrskpll fcpamntamw ehpiteqqvg qlkafgyiei
      181 pcvakklvcg dqgpqknsap
//
LOCUS       XP_061014962             198 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphopantothenoylcysteine decarboxylase isoform X5 [Dama dama].
ACCESSION   XP_061014962
VERSION     XP_061014962.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158979.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..198
                     /product="phosphopantothenoylcysteine decarboxylase
                     isoform X5"
                     /calculated_mol_wt=21682
     Region          21..193
                     /region_name="Flavoprotein"
                     /note="cl19190"
                     /db_xref="CDD:450266"
     CDS             1..198
                     /gene="PPCDC"
                     /coded_by="XM_061158979.1:43..639"
                     /db_xref="GeneID:133067922"
ORIGIN      
        1 mepnsgrlpg leatrphmep raacsaaapl rrpfhvlvgv tgsvaalklp vlvsklldip
       61 dlkvavvtte rakhfysprd vpvtlysdad ewemwkcrsd pvlhidlrrw adlmlvapld
      121 antlgkvasg icdnlltcvi rawdrskpll fcpamntamw ehpiteqqvg qlkafgyiei
      181 pcvakklvcg dqgchgcc
//
LOCUS       XP_061014963             194 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphopantothenoylcysteine decarboxylase isoform X6 [Dama dama].
ACCESSION   XP_061014963
VERSION     XP_061014963.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158980.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..194
                     /product="phosphopantothenoylcysteine decarboxylase
                     isoform X6"
                     /calculated_mol_wt=21306
     Region          21..193
                     /region_name="Flavoprotein"
                     /note="cl19190"
                     /db_xref="CDD:450266"
     CDS             1..194
                     /gene="PPCDC"
                     /coded_by="XM_061158980.1:43..627"
                     /db_xref="GeneID:133067922"
ORIGIN      
        1 mepnsgrlpg leatrphmep raacsaaapl rrpfhvlvgv tgsvaalklp vlvsklldip
       61 dlkvavvtte rakhfysprd vpvtlysdad ewemwkcrsd pvlhidlrrw adlmlvapld
      121 antlgkvasg icdnlltcvi rawdrskpll fcpamntamw ehpiteqqvg qlkafgyiei
      181 pcvakklvcg dqgk
//
LOCUS       XP_061014964             145 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphopantothenoylcysteine decarboxylase isoform X7 [Dama dama].
ACCESSION   XP_061014964
VERSION     XP_061014964.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158981.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..145
                     /product="phosphopantothenoylcysteine decarboxylase
                     isoform X7"
                     /calculated_mol_wt=15438
     Region          <30..145
                     /region_name="Flavoprotein"
                     /note="cl19190"
                     /db_xref="CDD:450266"
     CDS             1..145
                     /gene="PPCDC"
                     /coded_by="XM_061158981.1:115..552"
                     /db_xref="GeneID:133067922"
ORIGIN      
        1 mepnsgrlpg leatrphmep raacsaaapl rrpfhvlvgv tgsvaalklp vlvsklldip
       61 dtcvirawdr skpllfcpam ntamwehpit eqqvgqlkaf gyieipcvak klvcgdqgmg
      121 amaevgtivd kvkevlsqhg gsqqs
//
LOCUS       XP_061014965             210 aa            linear   MAM 02-DEC-2023
DEFINITION  ribonuclease P protein subunit p25 [Dama dama].
ACCESSION   XP_061014965
VERSION     XP_061014965.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158982.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..210
                     /product="ribonuclease P protein subunit p25"
                     /calculated_mol_wt=22052
     Region          48..112
                     /region_name="Alba"
                     /note="pfam01918"
                     /db_xref="CDD:426509"
     CDS             1..210
                     /gene="RPP25"
                     /coded_by="XM_061158982.1:153..785"
                     /db_xref="GeneID:133067923"
ORIGIN      
        1 makpaspqrr rmenfrkvrs eeapvgsgde eggpgsgpfa dlapgavhmr vkegskirnl
       61 lafatasmaq patraivfsg cgrattktvt caeilkrrla glhqvtrlry qsvrelwqsl
      121 ppeptpgqkp gepaaslsvl knvpslaill skdaldprqp gyqppnphpg pssqptapts
      181 krslgepaag egsakrsqpe pgaaeedqta
//
LOCUS       XP_061014966             152 aa            linear   MAM 02-DEC-2023
DEFINITION  cytochrome c oxidase subunit 5A, mitochondrial [Dama dama].
ACCESSION   XP_061014966
VERSION     XP_061014966.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158983.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..152
                     /product="cytochrome c oxidase subunit 5A, mitochondrial"
                     /calculated_mol_wt=16556
     Region          47..148
                     /region_name="Cyt_c_Oxidase_Va"
                     /note="Cytochrome c oxidase subunit Va. Cytochrome c
                     oxidase (CcO), the terminal oxidase in the respiratory
                     chains of eukaryotes and most bacteria, is a multi-chain
                     transmembrane protein located in the inner membrane of
                     mitochondria and the cell membrane of...; cd00923"
                     /db_xref="CDD:238463"
     Site            order(51,54..55,83..87,121,124,127,130)
                     /site_type="other"
                     /note="Subunit Va/VIc interface [polypeptide binding]"
                     /db_xref="CDD:238463"
     Site            order(70,74)
                     /site_type="other"
                     /note="Subunit Va/Vb interface [polypeptide binding]"
                     /db_xref="CDD:238463"
     Site            order(73,77,99,102..106,109,112..113,116,140,142)
                     /site_type="other"
                     /note="Subunit Va/IV interface [polypeptide binding]"
                     /db_xref="CDD:238463"
     Site            order(81,83,117)
                     /site_type="other"
                     /note="Subunit Va/II interface [polypeptide binding]"
                     /db_xref="CDD:238463"
     CDS             1..152
                     /gene="LOC133067925"
                     /coded_by="XM_061158983.1:94..552"
                     /db_xref="GeneID:133067925"
ORIGIN      
        1 mlgaavrrcs vaaaavaras prgllhptaa pgpaaavhsl rcyshgshet deefdarwvt
       61 yfnkpdidaw elrkgmntlv gydlvpepki idaalracrr lndfasavri levvkdkagp
      121 hkeiypyviq elrptlnelg istpeelgld kv
//
LOCUS       XP_061014967             423 aa            linear   MAM 02-DEC-2023
DEFINITION  mannose-6-phosphate isomerase isoform X1 [Dama dama].
ACCESSION   XP_061014967
VERSION     XP_061014967.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158984.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..423
                     /product="mannose-6-phosphate isomerase isoform X1"
                     /calculated_mol_wt=46282
     Region          9..406
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
     Site            order(18,48,50,99,107..108,110,112,135,137,139,276,278,
                     285,287,291,295)
                     /site_type="active"
                     /db_xref="CDD:380414"
     CDS             1..423
                     /gene="MPI"
                     /coded_by="XM_061158984.1:41..1312"
                     /db_xref="GeneID:133067926"
ORIGIN      
        1 maaqrvfpls cvvqqyawgk mgsnsevarl lassdplaqi sedkpyaelw mgshprgdak
       61 ildnrisqkt lgqwiadnqd slgskvkdtf ngklpflfkv lsvetalsiq ahpnkelaek
      121 lhlqapqhyp danhkpemai altpfqglcg frpveeivtf ltkvpefqfl igdnaaaqlk
      181 qslsqdpeav tsalrscfsh lmksekkvvv eqlnllvkri sqqvaagnnm edicgelllq
      241 lhqqypgdig cfaiyflnll tlkpgeamfl eanvphaylk gdcvecmacs dntvragltp
      301 kfidvptlce mlsytpspsq drlfpparsp edpylsiydp pvpdftvmkm evpgsvteyk
      361 vlaldsasil lvvqgtvtas tptaqatipl krggvlfiga nesvslkltv pkdllmfrac
      421 cll
//
LOCUS       XP_061014968             403 aa            linear   MAM 02-DEC-2023
DEFINITION  mannose-6-phosphate isomerase isoform X2 [Dama dama].
ACCESSION   XP_061014968
VERSION     XP_061014968.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158985.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..403
                     /product="mannose-6-phosphate isomerase isoform X2"
                     /calculated_mol_wt=44017
     Region          2..386
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
     Site            order(28,30,79,87..88,90,92,115,117,119,256,258,265,267,
                     271,275)
                     /site_type="active"
                     /db_xref="CDD:380414"
     CDS             1..403
                     /gene="MPI"
                     /coded_by="XM_061158985.1:152..1363"
                     /db_xref="GeneID:133067926"
ORIGIN      
        1 mgsnsevarl lassdplaqi sedkpyaelw mgshprgdak ildnrisqkt lgqwiadnqd
       61 slgskvkdtf ngklpflfkv lsvetalsiq ahpnkelaek lhlqapqhyp danhkpemai
      121 altpfqglcg frpveeivtf ltkvpefqfl igdnaaaqlk qslsqdpeav tsalrscfsh
      181 lmksekkvvv eqlnllvkri sqqvaagnnm edicgelllq lhqqypgdig cfaiyflnll
      241 tlkpgeamfl eanvphaylk gdcvecmacs dntvragltp kfidvptlce mlsytpspsq
      301 drlfpparsp edpylsiydp pvpdftvmkm evpgsvteyk vlaldsasil lvvqgtvtas
      361 tptaqatipl krggvlfiga nesvslkltv pkdllmfrac cll
//
LOCUS       XP_061014970             403 aa            linear   MAM 02-DEC-2023
DEFINITION  mannose-6-phosphate isomerase isoform X2 [Dama dama].
ACCESSION   XP_061014970
VERSION     XP_061014970.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158987.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..403
                     /product="mannose-6-phosphate isomerase isoform X2"
                     /calculated_mol_wt=44017
     Region          2..386
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
     Site            order(28,30,79,87..88,90,92,115,117,119,256,258,265,267,
                     271,275)
                     /site_type="active"
                     /db_xref="CDD:380414"
     CDS             1..403
                     /gene="MPI"
                     /coded_by="XM_061158987.1:130..1341"
                     /db_xref="GeneID:133067926"
ORIGIN      
        1 mgsnsevarl lassdplaqi sedkpyaelw mgshprgdak ildnrisqkt lgqwiadnqd
       61 slgskvkdtf ngklpflfkv lsvetalsiq ahpnkelaek lhlqapqhyp danhkpemai
      121 altpfqglcg frpveeivtf ltkvpefqfl igdnaaaqlk qslsqdpeav tsalrscfsh
      181 lmksekkvvv eqlnllvkri sqqvaagnnm edicgelllq lhqqypgdig cfaiyflnll
      241 tlkpgeamfl eanvphaylk gdcvecmacs dntvragltp kfidvptlce mlsytpspsq
      301 drlfpparsp edpylsiydp pvpdftvmkm evpgsvteyk vlaldsasil lvvqgtvtas
      361 tptaqatipl krggvlfiga nesvslkltv pkdllmfrac cll
//
LOCUS       XP_061014971             191 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM219B isoform X1 [Dama dama].
ACCESSION   XP_061014971
VERSION     XP_061014971.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158988.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..191
                     /product="protein FAM219B isoform X1"
                     /calculated_mol_wt=20100
     Region          66..191
                     /region_name="FAM219A"
                     /note="Protein family FAM219A; pfam15260"
                     /db_xref="CDD:464600"
     CDS             1..191
                     /gene="FAM219B"
                     /coded_by="XM_061158988.1:29..604"
                     /db_xref="GeneID:133067927"
ORIGIN      
        1 matadpdgha arsipgprps gtgaaglpsg psgigaprfg eripvavekr gpymvaraps
       61 lqaklqkhrd lakavlrrkg mlgaapnrpd ssgkrsvkfn kgytalsqsp denlvsldsd
      121 sdgelesrys sgyssaeqvn qdvsrqllqd gyhldeipdd edldlippkp mtstcsccwc
      181 clgasssctl q
//
LOCUS       XP_061014972             190 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM219B isoform X2 [Dama dama].
ACCESSION   XP_061014972
VERSION     XP_061014972.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158989.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..190
                     /product="protein FAM219B isoform X2"
                     /calculated_mol_wt=19971
     Region          66..190
                     /region_name="FAM219A"
                     /note="Protein family FAM219A; pfam15260"
                     /db_xref="CDD:464600"
     CDS             1..190
                     /gene="FAM219B"
                     /coded_by="XM_061158989.1:29..601"
                     /db_xref="GeneID:133067927"
ORIGIN      
        1 matadpdgha arsipgprps gtgaaglpsg psgigaprfg eripvavekr gpymvaraps
       61 lqaklqkhrd lakavlrrkg mlgaapnrpd ssgkrsvkfn kgytalsqsp denlvsldsd
      121 sdgelesrys sgyssaevnq dvsrqllqdg yhldeipdde dldlippkpm tstcsccwcc
      181 lgasssctlq
//
LOCUS       XP_061014973             157 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM219B isoform X3 [Dama dama].
ACCESSION   XP_061014973
VERSION     XP_061014973.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158990.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..157
                     /product="protein FAM219B isoform X3"
                     /calculated_mol_wt=16425
     Region          <39..153
                     /region_name="PTZ00084"
                     /note="40S ribosomal protein S3; Provisional"
                     /db_xref="CDD:240260"
     Region          66..>120
                     /region_name="FAM219A"
                     /note="Protein family FAM219A; pfam15260"
                     /db_xref="CDD:464600"
     CDS             1..157
                     /gene="FAM219B"
                     /coded_by="XM_061158990.1:29..502"
                     /db_xref="GeneID:133067927"
ORIGIN      
        1 matadpdgha arsipgprps gtgaaglpsg psgigaprfg eripvavekr gpymvaraps
       61 lqaklqkhrd lakavlrrkg mlgaapnrpd ssgkrsvkfn kgytalsqsp denlvsldsd
      121 raaasehclf rdgllrgliv meswnpdtpp giplqsr
//
LOCUS       XP_061014974             156 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM219B isoform X4 [Dama dama].
ACCESSION   XP_061014974
VERSION     XP_061014974.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158991.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..156
                     /product="protein FAM219B isoform X4"
                     /calculated_mol_wt=16338
     Region          <39..153
                     /region_name="PTZ00084"
                     /note="40S ribosomal protein S3; Provisional"
                     /db_xref="CDD:240260"
     Region          66..>120
                     /region_name="FAM219A"
                     /note="Protein family FAM219A; pfam15260"
                     /db_xref="CDD:464600"
     CDS             1..156
                     /gene="FAM219B"
                     /coded_by="XM_061158991.1:30..500"
                     /db_xref="GeneID:133067927"
ORIGIN      
        1 matadpdgha arsipgprps gtgaaglpsg psgigaprfg eripvavekr gpymvaraps
       61 lqaklqkhrd lakavlrrkg mlgaapnrpd ssgkrsvkfn kgytalsqsp denlvsldsd
      121 raaasehclf rdgllrgliv meswnpdtpp giplqr
//
LOCUS       XP_061014975             328 aa            linear   MAM 02-DEC-2023
DEFINITION  secretory carrier-associated membrane protein 2 [Dama dama].
ACCESSION   XP_061014975
VERSION     XP_061014975.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158992.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..328
                     /product="secretory carrier-associated membrane protein 2"
                     /calculated_mol_wt=36681
     Region          117..292
                     /region_name="SCAMP"
                     /note="SCAMP family; pfam04144"
                     /db_xref="CDD:461193"
     CDS             1..328
                     /gene="SCAMP2"
                     /coded_by="XM_061158992.1:124..1110"
                     /db_xref="GeneID:133067929"
ORIGIN      
        1 mssfdtnpfa dpvdvnpfqd psvtqltnap qgglaefnpf setnaattvp vtqmpgpsqp
       61 avlqpsvept qptpqavasa aqasllrqqe eldrkaaele rkerelqntv anlhvrennw
      121 pplpvwcpvk pcfyqdfste ipadyqrick mlyylwmlhs vtlflnllac lawflvdtsr
      181 gvdfglsilw fviftpcafl cwyrpiykaf rsdnsfsffv fffvffcqig iyiiqligip
      241 slgdsgwiaa lstmkhdlav siimmvvagf ftlcavlslf llkrvhslyr rtgasfqqaq
      301 eefsqgifsn rtfrnaassa aqgafqgn
//
LOCUS       XP_061014976             473 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase ULK3 isoform X1 [Dama dama].
ACCESSION   XP_061014976
VERSION     XP_061014976.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158993.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..473
                     /product="serine/threonine-protein kinase ULK3 isoform X1"
                     /calculated_mol_wt=53330
     Region          18..269
                     /region_name="STKc_ULK3"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Unc-51-like kinase 3; cd14121"
                     /db_xref="CDD:271023"
     Site            order(20..24,28,42,44,75,91..94,98,100,137,139,141..142,
                     144,157,160,175..178)
                     /site_type="active"
                     /db_xref="CDD:271023"
     Site            order(20..24,28,42,44,75,91..94,98,137,139,141..142,144,
                     157)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271023"
     Site            order(24,98,100,137,139,141,160,175..178)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271023"
     Site            order(156..166,168..178)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271023"
     Region          279..354
                     /region_name="MIT_2"
                     /note="MIT: domain contained within Microtubule
                     Interacting and Trafficking molecules. This sub-family of
                     MIT domains is found in proteins with an n-terminal
                     serine/threonine kinase domain. The molecular function of
                     the MIT domain is unclear; cd02684"
                     /db_xref="CDD:239147"
     Region          375..450
                     /region_name="MIT"
                     /note="domain contained within Microtubule Interacting and
                     Trafficking molecules. The MIT domain is found in sorting
                     nexins, the nuclear thiol protease PalBH, the AAA protein
                     spastin and archaebacterial proteins with similar domain
                     architecture, vacuolar...; cl00299"
                     /db_xref="CDD:469712"
     CDS             1..473
                     /gene="ULK3"
                     /coded_by="XM_061158993.1:49..1470"
                     /db_xref="GeneID:133067930"
ORIGIN      
        1 magsgwgppr ldgfilterl gsgtyatvyk ayakkdtrev vaikcvakks lnkasvenll
       61 teieilkgir hphivqlkdf qwdsdniyli mefcaggdls rfihtrrilp ekvarvfmqq
      121 lasalqflhe rnishldlkp qnillsslek phlkladfgf aqhmsprdek hvlrgsplym
      181 apemvcqrqy darvdlwsvg vilyealfgq ppfasrsfse leekirsnrv ielplrpqls
      241 qdcrdllqrl lerdpsrris fqdffahpwv dlehmpsges laratalvvq avkkdqegda
      301 aaalslycka ldyfvpalhy evdaqrkkai kakqvgeyvs raeelkaiis sssqallrqg
      361 tsaqdllrem ardkprllaa levasaamak eeeaggeqda lalyqrslge lllllaaepp
      421 grrrellhte vqnlmaraey lkeqvkmkes hweaetldke glsesvrssc tlq
//
LOCUS       XP_061014977             472 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase ULK3 isoform X2 [Dama dama].
ACCESSION   XP_061014977
VERSION     XP_061014977.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158994.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..472
                     /product="serine/threonine-protein kinase ULK3 isoform X2"
                     /calculated_mol_wt=53201
     Region          18..269
                     /region_name="STKc_ULK3"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Unc-51-like kinase 3; cd14121"
                     /db_xref="CDD:271023"
     Site            order(20..24,28,42,44,75,91..94,98,100,137,139,141..142,
                     144,157,160,175..178)
                     /site_type="active"
                     /db_xref="CDD:271023"
     Site            order(20..24,28,42,44,75,91..94,98,137,139,141..142,144,
                     157)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271023"
     Site            order(24,98,100,137,139,141,160,175..178)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271023"
     Site            order(156..166,168..178)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271023"
     Region          279..353
                     /region_name="MIT_2"
                     /note="MIT: domain contained within Microtubule
                     Interacting and Trafficking molecules. This sub-family of
                     MIT domains is found in proteins with an n-terminal
                     serine/threonine kinase domain. The molecular function of
                     the MIT domain is unclear; cd02684"
                     /db_xref="CDD:239147"
     Region          374..449
                     /region_name="MIT"
                     /note="domain contained within Microtubule Interacting and
                     Trafficking molecules. The MIT domain is found in sorting
                     nexins, the nuclear thiol protease PalBH, the AAA protein
                     spastin and archaebacterial proteins with similar domain
                     architecture, vacuolar...; cl00299"
                     /db_xref="CDD:469712"
     CDS             1..472
                     /gene="ULK3"
                     /coded_by="XM_061158994.1:49..1467"
                     /db_xref="GeneID:133067930"
ORIGIN      
        1 magsgwgppr ldgfilterl gsgtyatvyk ayakkdtrev vaikcvakks lnkasvenll
       61 teieilkgir hphivqlkdf qwdsdniyli mefcaggdls rfihtrrilp ekvarvfmqq
      121 lasalqflhe rnishldlkp qnillsslek phlkladfgf aqhmsprdek hvlrgsplym
      181 apemvcqrqy darvdlwsvg vilyealfgq ppfasrsfse leekirsnrv ielplrpqls
      241 qdcrdllqrl lerdpsrris fqdffahpwv dlehmpsges laratalvvq avkkdqegda
      301 aaalslycka ldyfvpalhy evdaqrkkai kakvgeyvsr aeelkaiiss ssqallrqgt
      361 saqdllrema rdkprllaal evasaamake eeaggeqdal alyqrslgel llllaaeppg
      421 rrrellhtev qnlmaraeyl keqvkmkesh weaetldkeg lsesvrssct lq
//
LOCUS       XP_061014978             457 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase ULK3 isoform X3 [Dama dama].
ACCESSION   XP_061014978
VERSION     XP_061014978.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158995.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..457
                     /product="serine/threonine-protein kinase ULK3 isoform X3"
                     /calculated_mol_wt=51427
     Region          18..269
                     /region_name="STKc_ULK3"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Unc-51-like kinase 3; cd14121"
                     /db_xref="CDD:271023"
     Site            order(20..24,28,42,44,75,91..94,98,100,137,139,141..142,
                     144,157,160,175..178)
                     /site_type="active"
                     /db_xref="CDD:271023"
     Site            order(20..24,28,42,44,75,91..94,98,137,139,141..142,144,
                     157)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271023"
     Site            order(24,98,100,137,139,141,160,175..178)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271023"
     Site            order(156..166,168..178)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271023"
     Region          279..354
                     /region_name="MIT_2"
                     /note="MIT: domain contained within Microtubule
                     Interacting and Trafficking molecules. This sub-family of
                     MIT domains is found in proteins with an n-terminal
                     serine/threonine kinase domain. The molecular function of
                     the MIT domain is unclear; cd02684"
                     /db_xref="CDD:239147"
     Region          375..443
                     /region_name="MIT"
                     /note="domain contained within Microtubule Interacting and
                     Trafficking molecules. The MIT domain is found in sorting
                     nexins, the nuclear thiol protease PalBH, the AAA protein
                     spastin and archaebacterial proteins with similar domain
                     architecture, vacuolar...; cl00299"
                     /db_xref="CDD:469712"
     CDS             1..457
                     /gene="ULK3"
                     /coded_by="XM_061158995.1:49..1422"
                     /db_xref="GeneID:133067930"
ORIGIN      
        1 magsgwgppr ldgfilterl gsgtyatvyk ayakkdtrev vaikcvakks lnkasvenll
       61 teieilkgir hphivqlkdf qwdsdniyli mefcaggdls rfihtrrilp ekvarvfmqq
      121 lasalqflhe rnishldlkp qnillsslek phlkladfgf aqhmsprdek hvlrgsplym
      181 apemvcqrqy darvdlwsvg vilyealfgq ppfasrsfse leekirsnrv ielplrpqls
      241 qdcrdllqrl lerdpsrris fqdffahpwv dlehmpsges laratalvvq avkkdqegda
      301 aaalslycka ldyfvpalhy evdaqrkkai kakqvgeyvs raeelkaiis sssqallrqg
      361 tsaqdllrem ardkprllaa levasaamak eeeaggeqda lalyqrslge lllllaaepp
      421 grrrellhte mkeshweaet ldkeglsesv rssctlq
//
LOCUS       XP_061014979             426 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase ULK3 isoform X4 [Dama dama].
ACCESSION   XP_061014979
VERSION     XP_061014979.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158996.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..426
                     /product="serine/threonine-protein kinase ULK3 isoform X4"
                     /calculated_mol_wt=47993
     Region          18..222
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(20..23,26,28,44..47,90,94..95,97,109..110)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          232..307
                     /region_name="MIT_2"
                     /note="MIT: domain contained within Microtubule
                     Interacting and Trafficking molecules. This sub-family of
                     MIT domains is found in proteins with an n-terminal
                     serine/threonine kinase domain. The molecular function of
                     the MIT domain is unclear; cd02684"
                     /db_xref="CDD:239147"
     Region          328..403
                     /region_name="MIT"
                     /note="domain contained within Microtubule Interacting and
                     Trafficking molecules. The MIT domain is found in sorting
                     nexins, the nuclear thiol protease PalBH, the AAA protein
                     spastin and archaebacterial proteins with similar domain
                     architecture, vacuolar...; cl00299"
                     /db_xref="CDD:469712"
     CDS             1..426
                     /gene="ULK3"
                     /coded_by="XM_061158996.1:49..1329"
                     /db_xref="GeneID:133067930"
ORIGIN      
        1 magsgwgppr ldgfilterl gsgtyatvyk ayakwdsdni ylimefcagg dlsrfihtrr
       61 ilpekvarvf mqqlasalqf lhernishld lkpqnillss lekphlklad fgfaqhmspr
      121 dekhvlrgsp lymapemvcq rqydarvdlw svgvilyeal fgqppfasrs fseleekirs
      181 nrvielplrp qlsqdcrdll qrllerdpsr risfqdffah pwvdlehmps geslaratal
      241 vvqavkkdqe gdaaaalsly ckaldyfvpa lhyevdaqrk kaikakqvge yvsraeelka
      301 iissssqall rqgtsaqdll remardkprl laalevasaa makeeeagge qdalalyqrs
      361 lgelllllaa eppgrrrell htevqnlmar aeylkeqvkm keshweaetl dkeglsesvr
      421 ssctlq
//
LOCUS       XP_061014980             450 aa            linear   MAM 02-DEC-2023
DEFINITION  tyrosine-protein kinase CSK [Dama dama].
ACCESSION   XP_061014980
VERSION     XP_061014980.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158997.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..450
                     /product="tyrosine-protein kinase CSK"
                     /calculated_mol_wt=50453
     Region          11..67
                     /region_name="SH3_CSK"
                     /note="Src Homology 3 domain of C-terminal Src kinase;
                     cd11769"
                     /db_xref="CDD:212703"
     Site            order(20,23..24,26,40..41,43..44,46..47,49,59,61..64)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212703"
     Region          78..175
                     /region_name="SH2_csk_like"
                     /note="Src homology 2 (SH2) domain found in
                     Carboxyl-Terminal Src Kinase (Csk); cd09937"
                     /db_xref="CDD:198190"
     Site            order(89,107,128,130)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198190"
     Site            order(129,156)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198190"
     Region          188..443
                     /region_name="PTKc_Csk"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     C-terminal Src kinase; cd05082"
                     /db_xref="CDD:133213"
     Site            order(201..203,209,220,222,249,266..269,272..273,314,
                     318..319,321,331..332,345..349,358,392)
                     /site_type="active"
                     /db_xref="CDD:133213"
     Site            order(201..203,209,220,222,249,266..269,272..273,318..319,
                     321,331..332)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:133213"
     Site            order(215,226,238,241..242,244,259)
                     /site_type="other"
                     /note="SH3/SH2 domain interface [polypeptide binding]"
                     /db_xref="CDD:133213"
     Site            order(279..283,351,384..385,388..390)
                     /site_type="other"
                     /note="c-Src interface [polypeptide binding]"
                     /db_xref="CDD:133213"
     Site            order(314,318,345..349,358,392)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:133213"
     Site            331..351
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:133213"
     CDS             1..450
                     /gene="CSK"
                     /coded_by="XM_061158997.1:633..1985"
                     /db_xref="GeneID:133067932"
ORIGIN      
        1 msaiqaawps gteciakynf hgtaeqdlpf ckgdvltiva vtkdpnwyka knkvgregii
       61 panyvqkreg vkagtklslm pwfhgkitre qaerllcppe tglflvrest nypgdytlcv
      121 scdgkvehyr imyhasklsi deevyfenlm qlvehytsda dglctrlikp kvmegtvaaq
      181 deffrsgwal nmkdlkllqt igkgefgdvm lgdyrgnkva vkcikndata qaflaeasvm
      241 tqlrhsnlvq llgviveekg glyivteyma kgslvdylrs rgrsvlggdc llkfsldvce
      301 ameylegnnf vhrdlaarnv lvsednvakv sdfgltkeas stqdtgklpv kwtapealre
      361 kkfstksdvw sfgillweiy sfgrvpypri plkdvvprve kgykmdapdg cppavyevmk
      421 ncwhldaatr psflqlreql ehikthelhl
//
LOCUS       XP_061014981             508 aa            linear   MAM 02-DEC-2023
DEFINITION  enhancer of mRNA-decapping protein 3 isoform X1 [Dama dama].
ACCESSION   XP_061014981
VERSION     XP_061014981.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158998.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..508
                     /product="enhancer of mRNA-decapping protein 3 isoform X1"
                     /calculated_mol_wt=55699
     Region          2..66
                     /region_name="LSm16_N"
                     /note="Like-Sm protein 16, N-terminal domain; cd01737"
                     /db_xref="CDD:212484"
     Site            order(2,5,28,33,56,59..64)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:212484"
     Site            order(10..15,19..30,33..36)
                     /site_type="other"
                     /note="Sm1 motif"
                     /db_xref="CDD:212484"
     Site            order(29,55)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:212484"
     Site            51..62
                     /site_type="other"
                     /note="Sm2 motif"
                     /db_xref="CDD:212484"
     Region          102..194
                     /region_name="Edc3_linker"
                     /note="Linker region of enhancer of mRNA-decapping protein
                     3; pfam16598"
                     /db_xref="CDD:465188"
     Region          198..301
                     /region_name="FDF"
                     /note="FDF domain; pfam09532"
                     /db_xref="CDD:430668"
     Region          302..455
                     /region_name="YjeF_N"
                     /note="YjeF-related protein N-terminus; pfam03853"
                     /db_xref="CDD:427546"
     CDS             1..508
                     /gene="EDC3"
                     /coded_by="XM_061158998.1:184..1710"
                     /db_xref="GeneID:133067933"
ORIGIN      
        1 matdwlgsiv sincgdslgv yqgrvsavdq vsqtisltrp fhngvkclvp evtfragdit
       61 elkileipgp getqhfgdlh qtelgssgig cqvginqngt gklvrkpass ssapqnipkr
      121 tdvksqdvai spqqqqcsks yvdrhvesls qsksfrrrhn swssssrhpn qatpkksglk
      181 ngqmknkdde cfgddieeip dtdfdfegnl alfdkaavfe eidtyerrgg trsrgipser
      241 paryrhdeni lesepivyrr itvphgvske fctdsglvvp sisyelhkkl lavaekhglt
      301 lerrlemtgv casqmaltll ggpnrlnpkn vhqrptvall cgphvkgaqg iscgrhlanh
      361 dvqvilflpn fvkmlesitn elslfsktqg qqvsslkdlp tspvdlvinc ldcpenaflr
      421 dqpwykaava wanqnrapvl sidppvhege qgidakwsla lglplplgeh agrvylcdig
      481 ipqqvfqevg inyhspfgck fviplhsa
//
LOCUS       XP_061014982             508 aa            linear   MAM 02-DEC-2023
DEFINITION  enhancer of mRNA-decapping protein 3 isoform X1 [Dama dama].
ACCESSION   XP_061014982
VERSION     XP_061014982.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061158999.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..508
                     /product="enhancer of mRNA-decapping protein 3 isoform X1"
                     /calculated_mol_wt=55699
     Region          2..66
                     /region_name="LSm16_N"
                     /note="Like-Sm protein 16, N-terminal domain; cd01737"
                     /db_xref="CDD:212484"
     Site            order(2,5,28,33,56,59..64)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:212484"
     Site            order(10..15,19..30,33..36)
                     /site_type="other"
                     /note="Sm1 motif"
                     /db_xref="CDD:212484"
     Site            order(29,55)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:212484"
     Site            51..62
                     /site_type="other"
                     /note="Sm2 motif"
                     /db_xref="CDD:212484"
     Region          102..194
                     /region_name="Edc3_linker"
                     /note="Linker region of enhancer of mRNA-decapping protein
                     3; pfam16598"
                     /db_xref="CDD:465188"
     Region          198..301
                     /region_name="FDF"
                     /note="FDF domain; pfam09532"
                     /db_xref="CDD:430668"
     Region          302..455
                     /region_name="YjeF_N"
                     /note="YjeF-related protein N-terminus; pfam03853"
                     /db_xref="CDD:427546"
     CDS             1..508
                     /gene="EDC3"
                     /coded_by="XM_061158999.1:67..1593"
                     /db_xref="GeneID:133067933"
ORIGIN      
        1 matdwlgsiv sincgdslgv yqgrvsavdq vsqtisltrp fhngvkclvp evtfragdit
       61 elkileipgp getqhfgdlh qtelgssgig cqvginqngt gklvrkpass ssapqnipkr
      121 tdvksqdvai spqqqqcsks yvdrhvesls qsksfrrrhn swssssrhpn qatpkksglk
      181 ngqmknkdde cfgddieeip dtdfdfegnl alfdkaavfe eidtyerrgg trsrgipser
      241 paryrhdeni lesepivyrr itvphgvske fctdsglvvp sisyelhkkl lavaekhglt
      301 lerrlemtgv casqmaltll ggpnrlnpkn vhqrptvall cgphvkgaqg iscgrhlanh
      361 dvqvilflpn fvkmlesitn elslfsktqg qqvsslkdlp tspvdlvinc ldcpenaflr
      421 dqpwykaava wanqnrapvl sidppvhege qgidakwsla lglplplgeh agrvylcdig
      481 ipqqvfqevg inyhspfgck fviplhsa
//
LOCUS       XP_061014983             426 aa            linear   MAM 02-DEC-2023
DEFINITION  enhancer of mRNA-decapping protein 3 isoform X2 [Dama dama].
ACCESSION   XP_061014983
VERSION     XP_061014983.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159000.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..426
                     /product="enhancer of mRNA-decapping protein 3 isoform X2"
                     /calculated_mol_wt=46522
     Region          2..66
                     /region_name="LSm16_N"
                     /note="Like-Sm protein 16, N-terminal domain; cd01737"
                     /db_xref="CDD:212484"
     Site            order(2,5,28,33,56,59..64)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:212484"
     Site            order(10..15,19..30,33..36)
                     /site_type="other"
                     /note="Sm1 motif"
                     /db_xref="CDD:212484"
     Site            order(29,55)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:212484"
     Site            51..62
                     /site_type="other"
                     /note="Sm2 motif"
                     /db_xref="CDD:212484"
     Region          102..194
                     /region_name="Edc3_linker"
                     /note="Linker region of enhancer of mRNA-decapping protein
                     3; pfam16598"
                     /db_xref="CDD:465188"
     Region          198..301
                     /region_name="FDF"
                     /note="FDF domain; pfam09532"
                     /db_xref="CDD:430668"
     Region          302..>391
                     /region_name="YjeF_N"
                     /note="YjeF-related protein N-terminus; cl00318"
                     /db_xref="CDD:444831"
     CDS             1..426
                     /gene="EDC3"
                     /coded_by="XM_061159000.1:48..1328"
                     /db_xref="GeneID:133067933"
ORIGIN      
        1 matdwlgsiv sincgdslgv yqgrvsavdq vsqtisltrp fhngvkclvp evtfragdit
       61 elkileipgp getqhfgdlh qtelgssgig cqvginqngt gklvrkpass ssapqnipkr
      121 tdvksqdvai spqqqqcsks yvdrhvesls qsksfrrrhn swssssrhpn qatpkksglk
      181 ngqmknkdde cfgddieeip dtdfdfegnl alfdkaavfe eidtyerrgg trsrgipser
      241 paryrhdeni lesepivyrr itvphgvske fctdsglvvp sisyelhkkl lavaekhglt
      301 lerrlemtgv casqmaltll ggpnrlnpkn vhqrptvall cgphvkgaqg iscgrhlanh
      361 dvqvilflpn fvkmlesitn elslfsktqg qqvsslkgqa pvgmkkgsai ptlkprgsyg
      421 hphphs
//
LOCUS       XP_061014984             490 aa            linear   MAM 02-DEC-2023
DEFINITION  dual specificity protein kinase CLK3 [Dama dama].
ACCESSION   XP_061014984
VERSION     XP_061014984.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159001.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..490
                     /product="dual specificity protein kinase CLK3"
                     /calculated_mol_wt=58467
     Region          142..472
                     /region_name="PKc_CLK3"
                     /note="Catalytic domain of the Dual-specificity protein
                     kinase, CDC-like kinase 3; cd14214"
                     /db_xref="CDD:271116"
     Site            order(162..166,170,184,186,200,220,236..239,242,244..245,
                     283,285,287..288,290,320,323,332,334..337,339,376)
                     /site_type="active"
                     /db_xref="CDD:271116"
     Site            order(162..165,170,184,186,220,236..239,242,245,287..288,
                     290,319..320)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271116"
     Site            order(200,244,283,285,323,332,334..337,339,376)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271116"
     Site            319..339
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271116"
     CDS             1..490
                     /gene="CLK3"
                     /coded_by="XM_061159001.1:313..1785"
                     /db_xref="GeneID:133067934"
ORIGIN      
        1 mhhckryrsp epdpylsyrw krrrsysreh egrlrypsrr eppprrsrsr shdrlpyqrr
       61 yrehrdsdty rcedrspsfg edyygssrch hrrrsrerep yrarkhahhc hkrrtrscss
      121 assrsqqssk rssrsveddk eghlvcrigd wlqeryeivg nlgegtfgkv vecldhargk
      181 sqvalkiirn vgkyreaarl einvlkkike kdkenkflcv lmsdwfnfhg hmciafellg
      241 kntfeflken nfqpyplphv rhmayqlcha lrflhenqlt htdlkpenil fvnsefetly
      301 nehksceeks vkntsirvad fgsatfdheh httivatrhy rppevilelg waqpcdvwsi
      361 gcilfeyyrg ftlfqthenr ehlvmmekil gpipshmihr trkqkyfykg glvwdenssd
      421 gryvkenckp lksymlqdtl ehvqlfdlmr rmlefdpaqr itlaeallhp ffagltpeer
      481 sfhtsrnpsr
//
LOCUS       XP_061014985             490 aa            linear   MAM 02-DEC-2023
DEFINITION  dual specificity protein kinase CLK3 [Dama dama].
ACCESSION   XP_061014985
VERSION     XP_061014985.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159002.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..490
                     /product="dual specificity protein kinase CLK3"
                     /calculated_mol_wt=58467
     Region          142..472
                     /region_name="PKc_CLK3"
                     /note="Catalytic domain of the Dual-specificity protein
                     kinase, CDC-like kinase 3; cd14214"
                     /db_xref="CDD:271116"
     Site            order(162..166,170,184,186,200,220,236..239,242,244..245,
                     283,285,287..288,290,320,323,332,334..337,339,376)
                     /site_type="active"
                     /db_xref="CDD:271116"
     Site            order(162..165,170,184,186,220,236..239,242,245,287..288,
                     290,319..320)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271116"
     Site            order(200,244,283,285,323,332,334..337,339,376)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271116"
     Site            319..339
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271116"
     CDS             1..490
                     /gene="CLK3"
                     /coded_by="XM_061159002.1:77..1549"
                     /db_xref="GeneID:133067934"
ORIGIN      
        1 mhhckryrsp epdpylsyrw krrrsysreh egrlrypsrr eppprrsrsr shdrlpyqrr
       61 yrehrdsdty rcedrspsfg edyygssrch hrrrsrerep yrarkhahhc hkrrtrscss
      121 assrsqqssk rssrsveddk eghlvcrigd wlqeryeivg nlgegtfgkv vecldhargk
      181 sqvalkiirn vgkyreaarl einvlkkike kdkenkflcv lmsdwfnfhg hmciafellg
      241 kntfeflken nfqpyplphv rhmayqlcha lrflhenqlt htdlkpenil fvnsefetly
      301 nehksceeks vkntsirvad fgsatfdheh httivatrhy rppevilelg waqpcdvwsi
      361 gcilfeyyrg ftlfqthenr ehlvmmekil gpipshmihr trkqkyfykg glvwdenssd
      421 gryvkenckp lksymlqdtl ehvqlfdlmr rmlefdpaqr itlaeallhp ffagltpeer
      481 sfhtsrnpsr
//
LOCUS       XP_061014986             556 aa            linear   MAM 02-DEC-2023
DEFINITION  AT-rich interactive domain-containing protein 3B isoform X1 [Dama
            dama].
ACCESSION   XP_061014986
VERSION     XP_061014986.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159003.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..556
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..556
                     /product="AT-rich interactive domain-containing protein 3B
                     isoform X1"
                     /calculated_mol_wt=59741
     Region          204..329
                     /region_name="ARID_ARID3B"
                     /note="ARID/BRIGHT DNA binding domain of AT-rich
                     interactive domain-containing protein 3B (ARID3B) and
                     similar proteins; cd16879"
                     /db_xref="CDD:350643"
     Site            order(238..244,269,271..272,275,283..286,288..290,292,
                     322..323)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350643"
     CDS             1..556
                     /gene="ARID3B"
                     /coded_by="XM_061159003.1:189..1859"
                     /db_xref="GeneID:133067935"
ORIGIN      
        1 meplrpqqkq pppppqpphl aplqmdarek qgqqtretpf lyaqklvtqq thlsatpgrp
       61 sgspalgpsa rvppatavar vferskvnse peeeeggleg edgddevaev aeketqaask
      121 yfhvqkvarq dpraaplpgl lpapglashg qqakedhtkd asktsasvst agqpgwnlde
      181 qlkqnggltw sddadggrgr eisrdfakly eldsdperke flddlfifmq krgtpinrip
      241 imakqildly mlyklvtekg glveiinkki wreitkglnl ptsitsaaft lrtqymkyly
      301 ayecekkals spaelqaaid gnrregrrps yssslfgysp taaagapall sppkirfpil
      361 glgssggtsa ggsrlspaap lrkgdgvpvt tvpvpnrlav pvtlagqqas trtatleqlr
      421 erlesgeppe kkvsrlseee qrlvqqafqr nlfhmarqlp mkiringrae draeasaaal
      481 nlttssigsi smsvdidgtt yagvlfaqkp avhlitgsap qsigssssss ssshcspspt
      541 ssrgtpsaep stswsl
//
LOCUS       XP_061014987             555 aa            linear   MAM 02-DEC-2023
DEFINITION  AT-rich interactive domain-containing protein 3B isoform X2 [Dama
            dama].
ACCESSION   XP_061014987
VERSION     XP_061014987.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159004.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..555
                     /product="AT-rich interactive domain-containing protein 3B
                     isoform X2"
                     /calculated_mol_wt=59670
     Region          204..329
                     /region_name="ARID_ARID3B"
                     /note="ARID/BRIGHT DNA binding domain of AT-rich
                     interactive domain-containing protein 3B (ARID3B) and
                     similar proteins; cd16879"
                     /db_xref="CDD:350643"
     Site            order(238..244,269,271..272,275,283..286,288..290,292,
                     322..323)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350643"
     CDS             1..555
                     /gene="ARID3B"
                     /coded_by="XM_061159004.1:189..1856"
                     /db_xref="GeneID:133067935"
ORIGIN      
        1 meplrpqqkq pppppqpphl aplqmdarek qgqqtretpf lyaqklvtqq thlsatpgrp
       61 sgspalgpsa rvppatavar vferskvnse peeeeggleg edgddevaev aeketqaask
      121 yfhvqkvarq dpraaplpgl lpapglashg qqakedhtkd asktsasvst agqpgwnlde
      181 qlkqnggltw sddadggrgr eisrdfakly eldsdperke flddlfifmq krgtpinrip
      241 imakqildly mlyklvtekg glveiinkki wreitkglnl ptsitsaaft lrtqymkyly
      301 ayecekkals spaelqaaid gnrregrrps yssslfgysp taaagapall sppkirfpil
      361 glgssggtsa ggsrlspaap lrkgdgvpvt tvpvpnrlav pvtlagqqas trtatleqlr
      421 erlesgeppe kkvsrlseee qrlvqqafqr nlfhmarqlp mkiringred raeasaaaln
      481 lttssigsis msvdidgtty agvlfaqkpa vhlitgsapq sigsssssss sshcspspts
      541 srgtpsaeps tswsl
//
LOCUS       XP_061014988             403 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin-like protein 7 isoform X1 [Dama dama].
ACCESSION   XP_061014988
VERSION     XP_061014988.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159005.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..403
                     /product="ubiquitin-like protein 7 isoform X1"
                     /calculated_mol_wt=43170
     Region          30..121
                     /region_name="Ubl_UBL7"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin-like
                     protein 7 (UBL7) and similar proteins; cd01815"
                     /db_xref="CDD:340513"
     Region          <369..398
                     /region_name="UBA_UBL7"
                     /note="UBA domain found in ubiquitin-like protein 7 (UBL7)
                     and similar proteins; cd14326"
                     /db_xref="CDD:270511"
     CDS             1..403
                     /gene="UBL7"
                     /coded_by="XM_061159005.1:19..1230"
                     /db_xref="GeneID:133067936"
ORIGIN      
        1 mqrgasgfrr edlrrkrere rermslsdwh lavkladqpl apksilrlpe telgeyslgg
       61 ysisflkqli agklqesvpd pelidliycg rklkddqtld fygiqpgstv hvlrkswpep
      121 dqkpepvdkv aalrefrvlh talhgsssyr eavfkmlsnk esldqiivat pglssdpial
      181 gvlqdkdlfs vfadpnmldt lvpahpalvn aivlvlhsva gstplpgads ssrgmpsssy
      241 rdmpggflfd glsddeddfh psarstpsss tpssrpaslg ysgaagprpi tqselatala
      301 lastpesssh tptpgtqghs sgtspmsssv qsgtpitndl fsqalqhalq asgqpslqsq
      361 wqpqlqqlrd mgiqddelsl ralqatggdi qaalelifag gap
//
LOCUS       XP_061014989             380 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin-like protein 7 isoform X2 [Dama dama].
ACCESSION   XP_061014989
VERSION     XP_061014989.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159006.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..380
                     /product="ubiquitin-like protein 7 isoform X2"
                     /calculated_mol_wt=40212
     Region          7..98
                     /region_name="Ubl_UBL7"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin-like
                     protein 7 (UBL7) and similar proteins; cd01815"
                     /db_xref="CDD:340513"
     Region          <346..375
                     /region_name="UBA_UBL7"
                     /note="UBA domain found in ubiquitin-like protein 7 (UBL7)
                     and similar proteins; cd14326"
                     /db_xref="CDD:270511"
     CDS             1..380
                     /gene="UBL7"
                     /coded_by="XM_061159006.1:104..1246"
                     /db_xref="GeneID:133067936"
ORIGIN      
        1 mslsdwhlav kladqplapk silrlpetel geyslggysi sflkqliagk lqesvpdpel
       61 idliycgrkl kddqtldfyg iqpgstvhvl rkswpepdqk pepvdkvaal refrvlhtal
      121 hgsssyreav fkmlsnkesl dqiivatpgl ssdpialgvl qdkdlfsvfa dpnmldtlvp
      181 ahpalvnaiv lvlhsvagst plpgadsssr gmpsssyrdm pggflfdgls ddeddfhpsa
      241 rstpssstps srpaslgysg aagprpitqs elatalalas tpessshtpt pgtqghssgt
      301 spmsssvqsg tpitndlfsq alqhalqasg qpslqsqwqp qlqqlrdmgi qddelslral
      361 qatggdiqaa lelifaggap
//
LOCUS       XP_061014990             380 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin-like protein 7 isoform X2 [Dama dama].
ACCESSION   XP_061014990
VERSION     XP_061014990.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159007.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..380
                     /product="ubiquitin-like protein 7 isoform X2"
                     /calculated_mol_wt=40212
     Region          7..98
                     /region_name="Ubl_UBL7"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin-like
                     protein 7 (UBL7) and similar proteins; cd01815"
                     /db_xref="CDD:340513"
     Region          <346..375
                     /region_name="UBA_UBL7"
                     /note="UBA domain found in ubiquitin-like protein 7 (UBL7)
                     and similar proteins; cd14326"
                     /db_xref="CDD:270511"
     CDS             1..380
                     /gene="UBL7"
                     /coded_by="XM_061159007.1:35..1177"
                     /db_xref="GeneID:133067936"
ORIGIN      
        1 mslsdwhlav kladqplapk silrlpetel geyslggysi sflkqliagk lqesvpdpel
       61 idliycgrkl kddqtldfyg iqpgstvhvl rkswpepdqk pepvdkvaal refrvlhtal
      121 hgsssyreav fkmlsnkesl dqiivatpgl ssdpialgvl qdkdlfsvfa dpnmldtlvp
      181 ahpalvnaiv lvlhsvagst plpgadsssr gmpsssyrdm pggflfdgls ddeddfhpsa
      241 rstpssstps srpaslgysg aagprpitqs elatalalas tpessshtpt pgtqghssgt
      301 spmsssvqsg tpitndlfsq alqhalqasg qpslqsqwqp qlqqlrdmgi qddelslral
      361 qatggdiqaa lelifaggap
//
LOCUS       XP_061014991             664 aa            linear   MAM 02-DEC-2023
DEFINITION  semaphorin-7A [Dama dama].
ACCESSION   XP_061014991
VERSION     XP_061014991.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159008.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..664
                     /product="semaphorin-7A"
                     /calculated_mol_wt=74774
     Region          70..489
                     /region_name="Sema_7A"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorin 7A (Sema7A, also called CD108); cd11243"
                     /db_xref="CDD:200504"
     Site            order(119..121,165..166,170,191,193..194,201,208,211..212,
                     214,219,247,271..274,276,278,373,377,380)
                     /site_type="other"
                     /note="putative plexin binding site [polypeptide binding]"
                     /db_xref="CDD:200504"
     Site            order(248..249,251,254..256,291,294..296,298,300,325..329,
                     386,403)
                     /site_type="other"
                     /note="putative homodimer interface [polypeptide binding]"
                     /db_xref="CDD:200504"
     Region          491..540
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     Region          562..614
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cd00096"
                     /db_xref="CDD:409353"
     Region          572..576
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          594..598
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          608..613
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..664
                     /gene="SEMA7A"
                     /coded_by="XM_061159008.1:53..2047"
                     /db_xref="GeneID:133067938"
ORIGIN      
        1 mtpppsrcta lgaprarvss plawsrfplr lllqlvwtaa asqghpksgp risavwkgha
       61 gqdhvdfgst ephtvlfhep gsssvwvggr nrvyvfdfsk grnasvrtvn igstkgscrd
      121 kqdcenyitl lekqneglla cgtnarhpsc wilvndsaef lgerrgyapf spdenslvlf
      181 dgdevystir kqeyngkipr frrirgeiel ytsdtvmqnp qfikativhq dqayddkiyy
      241 ffrednpdkn peaplnvsrv aqlcrgdqgg esslsvskwn tflkamlvcs daatnknfnr
      301 lqdvfllpdp nghwkdtrvy gvfsnpwnys avcvyslgdi dkvfctsslk gyhsslpnpr
      361 pgkclpdrqp iptetfqvad shpevvqrve pmgplktplf hskyhyqkvv vhrmhasnge
      421 tfhvlylttd kgtihkvvep gerehglafn ileiqpfrra aaiqaislda drrklyvnsq
      481 wevsqvpldl cevytggchg clmardpycg wyqdrcvsiy ssqepvlqsi npvephkgcp
      541 npkpeqaplq kvslaqnsry ylscpmesrh atyswrhens veqscepghq spncilfien
      601 ltdlhyghyy ceaqegsylr eaqhwellre dsamtsqllg hactlatslw lgvlptlmlg
      661 llvh
//
LOCUS       XP_061014992             668 aa            linear   MAM 02-DEC-2023
DEFINITION  receptor for retinol uptake STRA6 isoform X1 [Dama dama].
ACCESSION   XP_061014992
VERSION     XP_061014992.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159009.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..668
                     /product="receptor for retinol uptake STRA6 isoform X1"
                     /calculated_mol_wt=73742
     Region          42..656
                     /region_name="RBP_receptor"
                     /note="Retinol binding protein receptor; pfam14752"
                     /db_xref="CDD:464298"
     CDS             1..668
                     /gene="STRA6"
                     /coded_by="XM_061159009.1:68..2074"
                     /db_xref="GeneID:133067939"
ORIGIN      
        1 mstqaagnqt ssgatddeds ydswyidepq ggqelqpegl vpscqpsvpp glyhaclavl
       61 silvllllam lvrrrqlwph cghgrpglps pvdflagdrp rtvpaavfmv lfsslclllp
      121 tedplpflsl tsppgrdgea etsrgpwkil allyypalyy plaacatvrh gaahllgsvl
      181 swahlgvqvw qraecpespk iykyysllas lplllglgfl slwypvqlvr sfshgaatgs
      241 kglqssysee ylrtllcqkk lkssshtckh gfasrawiyf rhsvyipqrg frlplklvls
      301 vtltgtaiyq vallllvgvv ptiqkvragi ttdvsyllag fgivlsedrq evvelvkhhl
      361 walevcyisa lvlsclltfl mlvhslvthr tnlqalhrgg aldmgpltqs prpsrqaifc
      421 wmsftayqta ftclgllvqq ilfflgtltl aflvfmpmlh grnllllhyl ksswpfwltl
      481 vlavtlqnva ahwvfldthh erpgltnrrv lyaatfllfp vnvlvgamva awrvllsaly
      541 navhlgrmdl sllppraatl dpgyhtycnf lkmevsqshp avmafcalll rtqrpqprtt
      601 pqdglrlgee eegiqllqtk dlvakgagpr ahqgrarwgl aytllhnpal qafrktalpg
      661 arvngsqp
//
LOCUS       XP_061014994             668 aa            linear   MAM 02-DEC-2023
DEFINITION  receptor for retinol uptake STRA6 isoform X1 [Dama dama].
ACCESSION   XP_061014994
VERSION     XP_061014994.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159011.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..668
                     /product="receptor for retinol uptake STRA6 isoform X1"
                     /calculated_mol_wt=73742
     Region          42..656
                     /region_name="RBP_receptor"
                     /note="Retinol binding protein receptor; pfam14752"
                     /db_xref="CDD:464298"
     CDS             1..668
                     /gene="STRA6"
                     /coded_by="XM_061159011.1:155..2161"
                     /db_xref="GeneID:133067939"
ORIGIN      
        1 mstqaagnqt ssgatddeds ydswyidepq ggqelqpegl vpscqpsvpp glyhaclavl
       61 silvllllam lvrrrqlwph cghgrpglps pvdflagdrp rtvpaavfmv lfsslclllp
      121 tedplpflsl tsppgrdgea etsrgpwkil allyypalyy plaacatvrh gaahllgsvl
      181 swahlgvqvw qraecpespk iykyysllas lplllglgfl slwypvqlvr sfshgaatgs
      241 kglqssysee ylrtllcqkk lkssshtckh gfasrawiyf rhsvyipqrg frlplklvls
      301 vtltgtaiyq vallllvgvv ptiqkvragi ttdvsyllag fgivlsedrq evvelvkhhl
      361 walevcyisa lvlsclltfl mlvhslvthr tnlqalhrgg aldmgpltqs prpsrqaifc
      421 wmsftayqta ftclgllvqq ilfflgtltl aflvfmpmlh grnllllhyl ksswpfwltl
      481 vlavtlqnva ahwvfldthh erpgltnrrv lyaatfllfp vnvlvgamva awrvllsaly
      541 navhlgrmdl sllppraatl dpgyhtycnf lkmevsqshp avmafcalll rtqrpqprtt
      601 pqdglrlgee eegiqllqtk dlvakgagpr ahqgrarwgl aytllhnpal qafrktalpg
      661 arvngsqp
//
LOCUS       XP_061014995             668 aa            linear   MAM 02-DEC-2023
DEFINITION  receptor for retinol uptake STRA6 isoform X1 [Dama dama].
ACCESSION   XP_061014995
VERSION     XP_061014995.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159012.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..668
                     /product="receptor for retinol uptake STRA6 isoform X1"
                     /calculated_mol_wt=73742
     Region          42..656
                     /region_name="RBP_receptor"
                     /note="Retinol binding protein receptor; pfam14752"
                     /db_xref="CDD:464298"
     CDS             1..668
                     /gene="STRA6"
                     /coded_by="XM_061159012.1:107..2113"
                     /db_xref="GeneID:133067939"
ORIGIN      
        1 mstqaagnqt ssgatddeds ydswyidepq ggqelqpegl vpscqpsvpp glyhaclavl
       61 silvllllam lvrrrqlwph cghgrpglps pvdflagdrp rtvpaavfmv lfsslclllp
      121 tedplpflsl tsppgrdgea etsrgpwkil allyypalyy plaacatvrh gaahllgsvl
      181 swahlgvqvw qraecpespk iykyysllas lplllglgfl slwypvqlvr sfshgaatgs
      241 kglqssysee ylrtllcqkk lkssshtckh gfasrawiyf rhsvyipqrg frlplklvls
      301 vtltgtaiyq vallllvgvv ptiqkvragi ttdvsyllag fgivlsedrq evvelvkhhl
      361 walevcyisa lvlsclltfl mlvhslvthr tnlqalhrgg aldmgpltqs prpsrqaifc
      421 wmsftayqta ftclgllvqq ilfflgtltl aflvfmpmlh grnllllhyl ksswpfwltl
      481 vlavtlqnva ahwvfldthh erpgltnrrv lyaatfllfp vnvlvgamva awrvllsaly
      541 navhlgrmdl sllppraatl dpgyhtycnf lkmevsqshp avmafcalll rtqrpqprtt
      601 pqdglrlgee eegiqllqtk dlvakgagpr ahqgrarwgl aytllhnpal qafrktalpg
      661 arvngsqp
//
LOCUS       XP_061014996             668 aa            linear   MAM 02-DEC-2023
DEFINITION  receptor for retinol uptake STRA6 isoform X1 [Dama dama].
ACCESSION   XP_061014996
VERSION     XP_061014996.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159013.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..668
                     /product="receptor for retinol uptake STRA6 isoform X1"
                     /calculated_mol_wt=73742
     Region          42..656
                     /region_name="RBP_receptor"
                     /note="Retinol binding protein receptor; pfam14752"
                     /db_xref="CDD:464298"
     CDS             1..668
                     /gene="STRA6"
                     /coded_by="XM_061159013.1:116..2122"
                     /db_xref="GeneID:133067939"
ORIGIN      
        1 mstqaagnqt ssgatddeds ydswyidepq ggqelqpegl vpscqpsvpp glyhaclavl
       61 silvllllam lvrrrqlwph cghgrpglps pvdflagdrp rtvpaavfmv lfsslclllp
      121 tedplpflsl tsppgrdgea etsrgpwkil allyypalyy plaacatvrh gaahllgsvl
      181 swahlgvqvw qraecpespk iykyysllas lplllglgfl slwypvqlvr sfshgaatgs
      241 kglqssysee ylrtllcqkk lkssshtckh gfasrawiyf rhsvyipqrg frlplklvls
      301 vtltgtaiyq vallllvgvv ptiqkvragi ttdvsyllag fgivlsedrq evvelvkhhl
      361 walevcyisa lvlsclltfl mlvhslvthr tnlqalhrgg aldmgpltqs prpsrqaifc
      421 wmsftayqta ftclgllvqq ilfflgtltl aflvfmpmlh grnllllhyl ksswpfwltl
      481 vlavtlqnva ahwvfldthh erpgltnrrv lyaatfllfp vnvlvgamva awrvllsaly
      541 navhlgrmdl sllppraatl dpgyhtycnf lkmevsqshp avmafcalll rtqrpqprtt
      601 pqdglrlgee eegiqllqtk dlvakgagpr ahqgrarwgl aytllhnpal qafrktalpg
      661 arvngsqp
//
LOCUS       XP_061014997             668 aa            linear   MAM 02-DEC-2023
DEFINITION  receptor for retinol uptake STRA6 isoform X1 [Dama dama].
ACCESSION   XP_061014997
VERSION     XP_061014997.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159014.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..668
                     /product="receptor for retinol uptake STRA6 isoform X1"
                     /calculated_mol_wt=73742
     Region          42..656
                     /region_name="RBP_receptor"
                     /note="Retinol binding protein receptor; pfam14752"
                     /db_xref="CDD:464298"
     CDS             1..668
                     /gene="STRA6"
                     /coded_by="XM_061159014.1:54..2060"
                     /db_xref="GeneID:133067939"
ORIGIN      
        1 mstqaagnqt ssgatddeds ydswyidepq ggqelqpegl vpscqpsvpp glyhaclavl
       61 silvllllam lvrrrqlwph cghgrpglps pvdflagdrp rtvpaavfmv lfsslclllp
      121 tedplpflsl tsppgrdgea etsrgpwkil allyypalyy plaacatvrh gaahllgsvl
      181 swahlgvqvw qraecpespk iykyysllas lplllglgfl slwypvqlvr sfshgaatgs
      241 kglqssysee ylrtllcqkk lkssshtckh gfasrawiyf rhsvyipqrg frlplklvls
      301 vtltgtaiyq vallllvgvv ptiqkvragi ttdvsyllag fgivlsedrq evvelvkhhl
      361 walevcyisa lvlsclltfl mlvhslvthr tnlqalhrgg aldmgpltqs prpsrqaifc
      421 wmsftayqta ftclgllvqq ilfflgtltl aflvfmpmlh grnllllhyl ksswpfwltl
      481 vlavtlqnva ahwvfldthh erpgltnrrv lyaatfllfp vnvlvgamva awrvllsaly
      541 navhlgrmdl sllppraatl dpgyhtycnf lkmevsqshp avmafcalll rtqrpqprtt
      601 pqdglrlgee eegiqllqtk dlvakgagpr ahqgrarwgl aytllhnpal qafrktalpg
      661 arvngsqp
//
LOCUS       XP_061014998             660 aa            linear   MAM 02-DEC-2023
DEFINITION  receptor for retinol uptake STRA6 isoform X2 [Dama dama].
ACCESSION   XP_061014998
VERSION     XP_061014998.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159015.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..660
                     /product="receptor for retinol uptake STRA6 isoform X2"
                     /calculated_mol_wt=72896
     Region          42..648
                     /region_name="RBP_receptor"
                     /note="Retinol binding protein receptor; pfam14752"
                     /db_xref="CDD:464298"
     CDS             1..660
                     /gene="STRA6"
                     /coded_by="XM_061159015.1:68..2050"
                     /db_xref="GeneID:133067939"
ORIGIN      
        1 mstqaagnqt ssgatddeds ydswyidepq ggqelqpegl vpscqpsvpp glyhaclavl
       61 silvllllam lvrrrqlwph cghgrpglps pvdflagdrp rtvpaavfmv lfsslclllp
      121 tedplpflsl tsppgrgpwk ilallyypal yyplaacatv rhgaahllgs vlswahlgvq
      181 vwqraecpes pkiykyysll aslplllglg flslwypvql vrsfshgaat gskglqssys
      241 eeylrtllcq kklkssshtc khgfasrawi yfrhsvyipq rgfrlplklv lsvtltgtai
      301 yqvallllvg vvptiqkvra gittdvsyll agfgivlsed rqevvelvkh hlwalevcyi
      361 salvlscllt flmlvhslvt hrtnlqalhr ggaldmgplt qsprpsrqai fcwmsftayq
      421 taftclgllv qqilfflgtl tlaflvfmpm lhgrnllllh ylksswpfwl tlvlavtlqn
      481 vaahwvfldt hherpgltnr rvlyaatfll fpvnvlvgam vaawrvllsa lynavhlgrm
      541 dlsllppraa tldpgyhtyc nflkmevsqs hpavmafcal llrtqrpqpr ttpqdglrlg
      601 eeeegiqllq tkdlvakgag prahqgrarw glaytllhnp alqafrktal pgarvngsqp
//
LOCUS       XP_061014999             520 aa            linear   MAM 02-DEC-2023
DEFINITION  cholesterol side-chain cleavage enzyme, mitochondrial [Dama dama].
ACCESSION   XP_061014999
VERSION     XP_061014999.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159016.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..520
                     /product="cholesterol side-chain cleavage enzyme,
                     mitochondrial"
                     /calculated_mol_wt=60416
     Region          82..507
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(147,151,158,210,321..322,325..326,329..330,333,384,
                     393,395,418,453..455,459..463,466..467)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410651"
     Site            order(240..241,321,324..325,329,391..394)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410651"
     CDS             1..520
                     /gene="LOC133067940"
                     /coded_by="XM_061159016.1:116..1678"
                     /db_xref="GeneID:133067940"
ORIGIN      
        1 mlarglplrs vlvkgcppil stgregwgqh rvgtgegagi stktprpyse ipspgdngwl
       61 nlyhfwrekg sqrihfrhie nfqkygpiyr eklgnlesvy iihpedvarl fkfegsyper
      121 ydvppwlayh hyyqkpigvl fkksgtwkkd rvvlntevma peaiknfipl lnpvsqdfvs
      181 llhkrinqqg sgkfvgdike dlfhfafesi tnvmfgerlg mleetvnpea qkfidavyqm
      241 fhtsvpllnl ppelyhlfrt ktwrdhvaaw dtifhkaery teifyqdlrr ktefrnypgi
      301 lyrllisekm lledvkanit emlaggvdtt smtlqwhlye marslkvqem lreevlnarr
      361 qaegdiskml qmvpllkasi ketlrlhpis vtlqrypend lvlqdylipa ktlvqvaiya
      421 mgrdpaffsn pdkfdptrwl gkdkdlihfr nlgfgwgvrq cvgrriaele mtlflihile
      481 nfkvemqhis dvntifnlil tpdkpiflvf rpfnqdppqv
//
LOCUS       XP_061015000             428 aa            linear   MAM 02-DEC-2023
DEFINITION  immunoglobulin superfamily containing leucine-rich repeat protein
            [Dama dama].
ACCESSION   XP_061015000
VERSION     XP_061015000.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159017.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..428
                     /product="immunoglobulin superfamily containing
                     leucine-rich repeat protein"
                     /calculated_mol_wt=45563
     Region          35..51
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <51..>182
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          52..75
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          76..99
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          100..123
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          124..147
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          148..171
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          153..>221
                     /region_name="PCC"
                     /note="polycystin cation channel protein; TIGR00864"
                     /db_xref="CDD:188093"
     Region          239..343
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          253..257
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          266..270
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          310..314
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          324..329
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..428
                     /gene="ISLR"
                     /coded_by="XM_061159017.1:328..1614"
                     /db_xref="GeneID:133067941"
ORIGIN      
        1 mqelrllclv vlaglvqacp epcecgekyg fhiadcayrd lqavpsgfpa nvttlslsan
       61 qlpslpggaf revprlqslw lahneirsva agalaslsql ksldlshnli sdfawsdlhs
      121 lsalqllkmd sneltfiprd afrslralrs lqlnhnrlht laegtfaplt alshlqindn
      181 pfdctcgivw fktwalttav sipeqdnitc tsphvlkgtr lnrllplpcs apsvqltyqp
      241 sqdgaelrpg fvlalhcdvd gqpapqlhwh iqtpggtvei aspnvgadgr alpgvlaass
      301 rprfqafang sllipdfgkl eegtysclat nelgsaessv nvalatpgeg gedalgrrfq
      361 gkaaegkvcy tvdnevqpsg pednvviiyl srprgpeaaa aaegvsgkqp pgllllgqsl
      421 lllflasf
//
LOCUS       XP_061015001             428 aa            linear   MAM 02-DEC-2023
DEFINITION  immunoglobulin superfamily containing leucine-rich repeat protein
            [Dama dama].
ACCESSION   XP_061015001
VERSION     XP_061015001.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159018.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..428
                     /product="immunoglobulin superfamily containing
                     leucine-rich repeat protein"
                     /calculated_mol_wt=45563
     Region          35..51
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <51..>182
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          52..75
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          76..99
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          100..123
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          124..147
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          148..171
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          153..>221
                     /region_name="PCC"
                     /note="polycystin cation channel protein; TIGR00864"
                     /db_xref="CDD:188093"
     Region          239..343
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          253..257
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          266..270
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          310..314
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          324..329
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..428
                     /gene="ISLR"
                     /coded_by="XM_061159018.1:134..1420"
                     /db_xref="GeneID:133067941"
ORIGIN      
        1 mqelrllclv vlaglvqacp epcecgekyg fhiadcayrd lqavpsgfpa nvttlslsan
       61 qlpslpggaf revprlqslw lahneirsva agalaslsql ksldlshnli sdfawsdlhs
      121 lsalqllkmd sneltfiprd afrslralrs lqlnhnrlht laegtfaplt alshlqindn
      181 pfdctcgivw fktwalttav sipeqdnitc tsphvlkgtr lnrllplpcs apsvqltyqp
      241 sqdgaelrpg fvlalhcdvd gqpapqlhwh iqtpggtvei aspnvgadgr alpgvlaass
      301 rprfqafang sllipdfgkl eegtysclat nelgsaessv nvalatpgeg gedalgrrfq
      361 gkaaegkvcy tvdnevqpsg pednvviiyl srprgpeaaa aaegvsgkqp pgllllgqsl
      421 lllflasf
//
LOCUS       XP_061015002             873 aa            linear   MAM 02-DEC-2023
DEFINITION  protein PML isoform X1 [Dama dama].
ACCESSION   XP_061015002
VERSION     XP_061015002.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159019.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..873
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..873
                     /product="protein PML isoform X1"
                     /calculated_mol_wt=96813
     Region          51..94
                     /region_name="RING-HC_PML_C-V"
                     /note="RING finger, HC subclass, found in promyelocytic
                     leukemia protein (PML) and similar proteins; cd16579"
                     /db_xref="CDD:438241"
     Region          126..168
                     /region_name="Bbox1_TRIM19_C-V"
                     /note="B-box-type 1 zinc finger found in promyelocytic
                     leukemia protein (PML) and similar proteins; cd19804"
                     /db_xref="CDD:380862"
     Site            order(134,136..138,148..150,152..153,165,167)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:380862"
     Region          187..237
                     /region_name="Bbox2_TRIM19_C-V"
                     /note="B-box-type 2 zinc finger found in tripartite
                     motif-containing protein 19, also called promyelocytic
                     leukemia protein (PML), and similar proteins; cd19770"
                     /db_xref="CDD:380828"
     Region          240..562
                     /region_name="DUF3583"
                     /note="Protein of unknown function (DUF3583); pfam12126"
                     /db_xref="CDD:432347"
     Region          602..749
                     /region_name="DnaQ_like_exo"
                     /note="DnaQ-like (or DEDD) 3'-5' exonuclease domain
                     superfamily; cl10012"
                     /db_xref="CDD:447876"
     CDS             1..873
                     /gene="PML"
                     /coded_by="XM_061159019.1:108..2729"
                     /db_xref="GeneID:133067942"
ORIGIN      
        1 mqqdpeptgs pgpqqdpalp hspsmpppes lseghqsshs dspteqatee efqflrcqgc
       61 raeakcpkll pclhtlcsgc lqesgvqcpv crapwpsgag tqaldnvffe slqrrlsvyq
      121 qiareqafct rckepasywc feceqlichk cfeahqwflk hearplaelr sqsirefldg
      181 trksnnifcs npnhrtpmlt siycrgcskp lccscalldr dhselkcdis teiqqrqdel
      241 dtmtqdlqeq drafaaaqaq mrsaitqlgr vradteefir ervrevvahv lelerelleg
      301 vgaryqrdye eiagqlgrld avlqrirmgs vlvqrmkqya sdqevldmhd flrkalhqlr
      361 qeepqsprat vhtdgfdtfr mrlqdllsci tqstdaalsr raspeaastp rdtcstdppe
      421 evqrdqeqaa glavvqpvpg ahpvpvyafs iqdpsrreev tntatpqkrk acqtecprkv
      481 ikmeseegee srlarsspeq prpstsravs pphldgppsp kspiirdels lpdsnhqtsd
      541 paeteervvv isssedsdpe npdsrelddn ssessdlqle gpsslgvldd slsnspvedk
      601 plvffdlkid netqkisqla avnqeshfra yiqpevlnvc skavslevgl qhflyflasm
      661 rqpilachkl wgpslpnffq aleqmnmlge fqkaisgfld tlplirecvp gassfklksl
      721 aktylarnms ersalaavlt mrdlcrllev spgpqlaphi hpfgslqcfs slqplvraav
      781 lpraearlla lhkvtfiell tahhhdprgg lkkynrflsl qtpasspaqp aidlqslgty
      841 fegllgapas agagdvaapp aghslaerat qqt
//
LOCUS       XP_061015003             807 aa            linear   MAM 02-DEC-2023
DEFINITION  protein PML isoform X2 [Dama dama].
ACCESSION   XP_061015003
VERSION     XP_061015003.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159020.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..807
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..807
                     /product="protein PML isoform X2"
                     /calculated_mol_wt=89132
     Region          51..94
                     /region_name="RING-HC_PML_C-V"
                     /note="RING finger, HC subclass, found in promyelocytic
                     leukemia protein (PML) and similar proteins; cd16579"
                     /db_xref="CDD:438241"
     Region          126..168
                     /region_name="Bbox1_TRIM19_C-V"
                     /note="B-box-type 1 zinc finger found in promyelocytic
                     leukemia protein (PML) and similar proteins; cd19804"
                     /db_xref="CDD:380862"
     Site            order(134,136..138,148..150,152..153,165,167)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:380862"
     Region          187..237
                     /region_name="Bbox2_TRIM19_C-V"
                     /note="B-box-type 2 zinc finger found in tripartite
                     motif-containing protein 19, also called promyelocytic
                     leukemia protein (PML), and similar proteins; cd19770"
                     /db_xref="CDD:380828"
     Region          240..562
                     /region_name="DUF3583"
                     /note="Protein of unknown function (DUF3583); pfam12126"
                     /db_xref="CDD:432347"
     Region          <393..802
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..807
                     /gene="PML"
                     /coded_by="XM_061159020.1:106..2529"
                     /db_xref="GeneID:133067942"
ORIGIN      
        1 mqqdpeptgs pgpqqdpalp hspsmpppes lseghqsshs dspteqatee efqflrcqgc
       61 raeakcpkll pclhtlcsgc lqesgvqcpv crapwpsgag tqaldnvffe slqrrlsvyq
      121 qiareqafct rckepasywc feceqlichk cfeahqwflk hearplaelr sqsirefldg
      181 trksnnifcs npnhrtpmlt siycrgcskp lccscalldr dhselkcdis teiqqrqdel
      241 dtmtqdlqeq drafaaaqaq mrsaitqlgr vradteefir ervrevvahv lelerelleg
      301 vgaryqrdye eiagqlgrld avlqrirmgs vlvqrmkqya sdqevldmhd flrkalhqlr
      361 qeepqsprat vhtdgfdtfr mrlqdllsci tqstdaalsr raspeaastp rdtcstdppe
      421 evqrdqeqaa glavvqpvpg ahpvpvyafs iqdpsrreev tntatpqkrk acqtecprkv
      481 ikmeseegee srlarsspeq prpstsravs pphldgppsp kspiirdels lpdsnhqtsd
      541 paeteervvv isssedsdpe npraepteta vlppsssvhp pprargashp lwasrlsrgt
      601 crppawpphh paqqaavpda espsqpaghq eqaavhrgis flsrgvqral rprstfhlpl
      661 ktygahtwaw lsptgqattl attgppsqpa npqedpacpq raggqprllr latrpldafp
      721 avsqwlnifp lphspgtsqr ntfyrrvmgg grasqipgae vssgdsgrap menppaqvpm
      781 easpsaflpp hplerpptst dtpqtsl
//
LOCUS       XP_061015004             614 aa            linear   MAM 02-DEC-2023
DEFINITION  protein PML isoform X3 [Dama dama].
ACCESSION   XP_061015004
VERSION     XP_061015004.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159021.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..614
                     /product="protein PML isoform X3"
                     /calculated_mol_wt=68703
     Region          51..94
                     /region_name="RING-HC_PML_C-V"
                     /note="RING finger, HC subclass, found in promyelocytic
                     leukemia protein (PML) and similar proteins; cd16579"
                     /db_xref="CDD:438241"
     Region          126..168
                     /region_name="Bbox1_TRIM19_C-V"
                     /note="B-box-type 1 zinc finger found in promyelocytic
                     leukemia protein (PML) and similar proteins; cd19804"
                     /db_xref="CDD:380862"
     Site            order(134,136..138,148..150,152..153,165,167)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:380862"
     Region          187..237
                     /region_name="Bbox2_TRIM19_C-V"
                     /note="B-box-type 2 zinc finger found in tripartite
                     motif-containing protein 19, also called promyelocytic
                     leukemia protein (PML), and similar proteins; cd19770"
                     /db_xref="CDD:380828"
     Region          240..562
                     /region_name="DUF3583"
                     /note="Protein of unknown function (DUF3583); pfam12126"
                     /db_xref="CDD:432347"
     CDS             1..614
                     /gene="PML"
                     /coded_by="XM_061159021.1:105..1949"
                     /db_xref="GeneID:133067942"
ORIGIN      
        1 mqqdpeptgs pgpqqdpalp hspsmpppes lseghqsshs dspteqatee efqflrcqgc
       61 raeakcpkll pclhtlcsgc lqesgvqcpv crapwpsgag tqaldnvffe slqrrlsvyq
      121 qiareqafct rckepasywc feceqlichk cfeahqwflk hearplaelr sqsirefldg
      181 trksnnifcs npnhrtpmlt siycrgcskp lccscalldr dhselkcdis teiqqrqdel
      241 dtmtqdlqeq drafaaaqaq mrsaitqlgr vradteefir ervrevvahv lelerelleg
      301 vgaryqrdye eiagqlgrld avlqrirmgs vlvqrmkqya sdqevldmhd flrkalhqlr
      361 qeepqsprat vhtdgfdtfr mrlqdllsci tqstdaalsr raspeaastp rdtcstdppe
      421 evqrdqeqaa glavvqpvpg ahpvpvyafs iqdpsrreev tntatpqkrk acqtecprkv
      481 ikmeseegee srlarsspeq prpstsravs pphldgppsp kspiirdels lpdsnhqtsd
      541 paeteervvv isssedsdpe npdsrelddn ssessdlqle gpsslgvldd slsnspvedk
      601 plvffdlkid nekd
//
LOCUS       XP_061015005             589 aa            linear   MAM 02-DEC-2023
DEFINITION  protein PML isoform X4 [Dama dama].
ACCESSION   XP_061015005
VERSION     XP_061015005.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159022.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..589
                     /product="protein PML isoform X4"
                     /calculated_mol_wt=65755
     Region          51..94
                     /region_name="RING-HC_PML_C-V"
                     /note="RING finger, HC subclass, found in promyelocytic
                     leukemia protein (PML) and similar proteins; cd16579"
                     /db_xref="CDD:438241"
     Region          126..168
                     /region_name="Bbox1_TRIM19_C-V"
                     /note="B-box-type 1 zinc finger found in promyelocytic
                     leukemia protein (PML) and similar proteins; cd19804"
                     /db_xref="CDD:380862"
     Site            order(134,136..138,148..150,152..153,165,167)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:380862"
     Region          187..237
                     /region_name="Bbox2_TRIM19_C-V"
                     /note="B-box-type 2 zinc finger found in tripartite
                     motif-containing protein 19, also called promyelocytic
                     leukemia protein (PML), and similar proteins; cd19770"
                     /db_xref="CDD:380828"
     Region          240..562
                     /region_name="DUF3583"
                     /note="Protein of unknown function (DUF3583); pfam12126"
                     /db_xref="CDD:432347"
     CDS             1..589
                     /gene="PML"
                     /coded_by="XM_061159022.1:105..1874"
                     /db_xref="GeneID:133067942"
ORIGIN      
        1 mqqdpeptgs pgpqqdpalp hspsmpppes lseghqsshs dspteqatee efqflrcqgc
       61 raeakcpkll pclhtlcsgc lqesgvqcpv crapwpsgag tqaldnvffe slqrrlsvyq
      121 qiareqafct rckepasywc feceqlichk cfeahqwflk hearplaelr sqsirefldg
      181 trksnnifcs npnhrtpmlt siycrgcskp lccscalldr dhselkcdis teiqqrqdel
      241 dtmtqdlqeq drafaaaqaq mrsaitqlgr vradteefir ervrevvahv lelerelleg
      301 vgaryqrdye eiagqlgrld avlqrirmgs vlvqrmkqya sdqevldmhd flrkalhqlr
      361 qeepqsprat vhtdgfdtfr mrlqdllsci tqstdaalsr raspeaastp rdtcstdppe
      421 evqrdqeqaa glavvqpvpg ahpvpvyafs iqdpsrreev tntatpqkrk acqtecprkv
      481 ikmeseegee srlarsspeq prpstsravs pphldgppsp kspiirdels lpdsnhqtsd
      541 paeteervvv isssedsdpe nprvieagls paqgrkgsel ewkaglggp
//
LOCUS       XP_061015006             420 aa            linear   MAM 02-DEC-2023
DEFINITION  protein PML isoform X5 [Dama dama].
ACCESSION   XP_061015006
VERSION     XP_061015006.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159023.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..420
                     /product="protein PML isoform X5"
                     /calculated_mol_wt=47516
     Region          51..94
                     /region_name="RING-HC_PML_C-V"
                     /note="RING finger, HC subclass, found in promyelocytic
                     leukemia protein (PML) and similar proteins; cd16579"
                     /db_xref="CDD:438241"
     Region          126..168
                     /region_name="Bbox1_TRIM19_C-V"
                     /note="B-box-type 1 zinc finger found in promyelocytic
                     leukemia protein (PML) and similar proteins; cd19804"
                     /db_xref="CDD:380862"
     Site            order(134,136..138,148..150,152..153,165,167)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:380862"
     Region          187..237
                     /region_name="Bbox2_TRIM19_C-V"
                     /note="B-box-type 2 zinc finger found in tripartite
                     motif-containing protein 19, also called promyelocytic
                     leukemia protein (PML), and similar proteins; cd19770"
                     /db_xref="CDD:380828"
     Region          240..>418
                     /region_name="DUF3583"
                     /note="Protein of unknown function (DUF3583); pfam12126"
                     /db_xref="CDD:432347"
     CDS             1..420
                     /gene="PML"
                     /coded_by="XM_061159023.1:105..1367"
                     /db_xref="GeneID:133067942"
ORIGIN      
        1 mqqdpeptgs pgpqqdpalp hspsmpppes lseghqsshs dspteqatee efqflrcqgc
       61 raeakcpkll pclhtlcsgc lqesgvqcpv crapwpsgag tqaldnvffe slqrrlsvyq
      121 qiareqafct rckepasywc feceqlichk cfeahqwflk hearplaelr sqsirefldg
      181 trksnnifcs npnhrtpmlt siycrgcskp lccscalldr dhselkcdis teiqqrqdel
      241 dtmtqdlqeq drafaaaqaq mrsaitqlgr vradteefir ervrevvahv lelerelleg
      301 vgaryqrdye eiagqlgrld avlqrirmgs vlvqrmkqya sdqevldmhd flrkalhqlr
      361 qeepqsprat vhtdgfdtfr mrlqdllsci tqstdaalsr raspeaastp rdtcstdphc
//
LOCUS       XP_061015008             398 aa            linear   MAM 02-DEC-2023
DEFINITION  stomatin-like protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061015008
VERSION     XP_061015008.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159025.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..398
                     /product="stomatin-like protein 1 isoform X1"
                     /calculated_mol_wt=42563
     Region          94..224
                     /region_name="SPFH_SLP-1"
                     /note="Stomatin-like protein 1 (SLP-1), a subgroup of the
                     stomatin-like proteins (slipins) family; belonging to the
                     SPFH (stomatin, prohibitin, flotillin, and HflK/C)
                     superfamily; cd13436"
                     /db_xref="CDD:259814"
     Region          311..395
                     /region_name="SCP2"
                     /note="SCP-2 sterol transfer family; pfam02036"
                     /db_xref="CDD:460423"
     CDS             1..398
                     /gene="STOML1"
                     /coded_by="XM_061159025.1:85..1281"
                     /db_xref="GeneID:133067944"
ORIGIN      
        1 mlgrsgyral plgdfdrfqq snfgflgsqk gclspepggv gpgadapqsw pscfchglis
       61 flgfllllit fpisgwfalk ivptyermiv frlgrirtpq gpgmvlllpf idsfqrvdlr
      121 trafnvppck laskdgavls vgadvqfriw dpvlsvmtvk dlntaarmta qnamtkallr
      181 rplreiqmet lkisdqllle indvtrawgl evdrvelave avlqppqdsp agpsldsslq
      241 qlalhllggs vpsgagaarl pgpadtlemv sevepsashg gagsspkqpv aeglltalkp
      301 flsealvsqv gacyqfnvvl psgpqniyfl dltagqgrvg rgvpdvvpdv vvelseedlq
      361 allcrelrpl gaymsgrlkv kgdlavamkl eavlkalk
//
LOCUS       XP_061015009             397 aa            linear   MAM 02-DEC-2023
DEFINITION  stomatin-like protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061015009
VERSION     XP_061015009.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159026.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..397
                     /product="stomatin-like protein 1 isoform X2"
                     /calculated_mol_wt=42492
     Region          94..224
                     /region_name="SPFH_SLP-1"
                     /note="Stomatin-like protein 1 (SLP-1), a subgroup of the
                     stomatin-like proteins (slipins) family; belonging to the
                     SPFH (stomatin, prohibitin, flotillin, and HflK/C)
                     superfamily; cd13436"
                     /db_xref="CDD:259814"
     Region          310..394
                     /region_name="SCP2"
                     /note="SCP-2 sterol transfer family; pfam02036"
                     /db_xref="CDD:460423"
     CDS             1..397
                     /gene="STOML1"
                     /coded_by="XM_061159026.1:85..1278"
                     /db_xref="GeneID:133067944"
ORIGIN      
        1 mlgrsgyral plgdfdrfqq snfgflgsqk gclspepggv gpgadapqsw pscfchglis
       61 flgfllllit fpisgwfalk ivptyermiv frlgrirtpq gpgmvlllpf idsfqrvdlr
      121 trafnvppck laskdgavls vgadvqfriw dpvlsvmtvk dlntaarmta qnamtkallr
      181 rplreiqmet lkisdqllle indvtrawgl evdrvelave avlqppqdsp agpsldsslq
      241 qlalhllggs vpsgagaarl pgpdtlemvs evepsashgg agsspkqpva eglltalkpf
      301 lsealvsqvg acyqfnvvlp sgpqniyfld ltagqgrvgr gvpdvvpdvv velseedlqa
      361 llcrelrplg aymsgrlkvk gdlavamkle avlkalk
//
LOCUS       XP_061015010             363 aa            linear   MAM 02-DEC-2023
DEFINITION  stomatin-like protein 1 isoform X3 [Dama dama].
ACCESSION   XP_061015010
VERSION     XP_061015010.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159027.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..363
                     /product="stomatin-like protein 1 isoform X3"
                     /calculated_mol_wt=39175
     Region          59..189
                     /region_name="SPFH_SLP-1"
                     /note="Stomatin-like protein 1 (SLP-1), a subgroup of the
                     stomatin-like proteins (slipins) family; belonging to the
                     SPFH (stomatin, prohibitin, flotillin, and HflK/C)
                     superfamily; cd13436"
                     /db_xref="CDD:259814"
     Region          276..360
                     /region_name="SCP2"
                     /note="SCP-2 sterol transfer family; pfam02036"
                     /db_xref="CDD:460423"
     CDS             1..363
                     /gene="STOML1"
                     /coded_by="XM_061159027.1:246..1337"
                     /db_xref="GeneID:133067944"
ORIGIN      
        1 mgwtrtvhsh lsdeetevql ywepisgrsk ssqmpkfrgl nagmkivpty ermivfrlgr
       61 irtpqgpgmv lllpfidsfq rvdlrtrafn vppcklaskd gavlsvgadv qfriwdpvls
      121 vmtvkdlnta armtaqnamt kallrrplre iqmetlkisd qllleindvt rawglevdrv
      181 elaveavlqp pqdspagpsl dsslqqlalh llggsvpsga gaarlpgpad tlemvsevep
      241 sashggagss pkqpvaegll talkpflsea lvsqvgacyq fnvvlpsgpq niyfldltag
      301 qgrvgrgvpd vvpdvvvels eedlqallcr elrplgayms grlkvkgdla vamkleavlk
      361 alk
//
LOCUS       XP_061015011             311 aa            linear   MAM 02-DEC-2023
DEFINITION  stomatin-like protein 1 isoform X4 [Dama dama].
ACCESSION   XP_061015011
VERSION     XP_061015011.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159028.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..311
                     /product="stomatin-like protein 1 isoform X4"
                     /calculated_mol_wt=33140
     Region          7..137
                     /region_name="SPFH_SLP-1"
                     /note="Stomatin-like protein 1 (SLP-1), a subgroup of the
                     stomatin-like proteins (slipins) family; belonging to the
                     SPFH (stomatin, prohibitin, flotillin, and HflK/C)
                     superfamily; cd13436"
                     /db_xref="CDD:259814"
     Region          224..308
                     /region_name="SCP2"
                     /note="SCP-2 sterol transfer family; pfam02036"
                     /db_xref="CDD:460423"
     CDS             1..311
                     /gene="STOML1"
                     /coded_by="XM_061159028.1:799..1734"
                     /db_xref="GeneID:133067944"
ORIGIN      
        1 mivfrlgrir tpqgpgmvll lpfidsfqrv dlrtrafnvp pcklaskdga vlsvgadvqf
       61 riwdpvlsvm tvkdlntaar mtaqnamtka llrrplreiq metlkisdql lleindvtra
      121 wglevdrvel aveavlqppq dspagpslds slqqlalhll ggsvpsgaga arlpgpadtl
      181 emvsevepsa shggagsspk qpvaegllta lkpflsealv sqvgacyqfn vvlpsgpqni
      241 yfldltagqg rvgrgvpdvv pdvvvelsee dlqallcrel rplgaymsgr lkvkgdlava
      301 mkleavlkal k
//
LOCUS       XP_061015012             311 aa            linear   MAM 02-DEC-2023
DEFINITION  stomatin-like protein 1 isoform X4 [Dama dama].
ACCESSION   XP_061015012
VERSION     XP_061015012.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159029.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..311
                     /product="stomatin-like protein 1 isoform X4"
                     /calculated_mol_wt=33140
     Region          7..137
                     /region_name="SPFH_SLP-1"
                     /note="Stomatin-like protein 1 (SLP-1), a subgroup of the
                     stomatin-like proteins (slipins) family; belonging to the
                     SPFH (stomatin, prohibitin, flotillin, and HflK/C)
                     superfamily; cd13436"
                     /db_xref="CDD:259814"
     Region          224..308
                     /region_name="SCP2"
                     /note="SCP-2 sterol transfer family; pfam02036"
                     /db_xref="CDD:460423"
     CDS             1..311
                     /gene="STOML1"
                     /coded_by="XM_061159029.1:231..1166"
                     /db_xref="GeneID:133067944"
ORIGIN      
        1 mivfrlgrir tpqgpgmvll lpfidsfqrv dlrtrafnvp pcklaskdga vlsvgadvqf
       61 riwdpvlsvm tvkdlntaar mtaqnamtka llrrplreiq metlkisdql lleindvtra
      121 wglevdrvel aveavlqppq dspagpslds slqqlalhll ggsvpsgaga arlpgpadtl
      181 emvsevepsa shggagsspk qpvaegllta lkpflsealv sqvgacyqfn vvlpsgpqni
      241 yfldltagqg rvgrgvpdvv pdvvvelsee dlqallcrel rplgaymsgr lkvkgdlava
      301 mkleavlkal k
//
LOCUS       XP_061015013             590 aa            linear   MAM 02-DEC-2023
DEFINITION  lysyl oxidase homolog 1 [Dama dama].
ACCESSION   XP_061015013
VERSION     XP_061015013.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159030.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..590
                     /product="lysyl oxidase homolog 1"
                     /calculated_mol_wt=64205
     Region          176..>361
                     /region_name="dnaA"
                     /note="chromosomal replication initiator protein DnaA;
                     cl42516"
                     /db_xref="CDD:455861"
     Region          386..585
                     /region_name="Lysyl_oxidase"
                     /note="Lysyl oxidase; pfam01186"
                     /db_xref="CDD:460102"
     CDS             1..590
                     /gene="LOXL1"
                     /coded_by="XM_061159030.1:340..2112"
                     /db_xref="GeneID:133067945"
ORIGIN      
        1 malaltgwql vwgacvcvlv hgqqappgqg sdpgrwrqli qwenngqvys llnsgaeyvp
       61 pgpqgseans rvllagapqa pprrsqgglr rrqapslplp grvgsdtvrg qarhpfgfgq
      121 vpdnwrevav gdntgmarar tsvsqqrhgg sassvsasaf astyrqpssf pqqqfpypqa
      181 pfvsqyetyd patrtydqgy vyyrsagggl gaaavasagv vypfqprary eeygggggee
      241 qpeyppqgfy paaperpyap qpadgldrry shslyhegta glepaypdpg pdaaqpnggg
      301 gggtyggggg dprlgwyppy gnmppeaysp pravepqppf rvleppylpv rssdapppgs
      361 erngaqqgrl svgsvyrpnq ngrglpdlvp dpnyvqasty vqrahlyslr caaeekclas
      421 taygpeatdy dvrvllrfpq rvknqgtadf lpnrprhtwe whschqhyhs mdefshydll
      481 daatgkkvae ghkasfcled stcdfgnlkr yactshtqgl spgcydtyna didcqwidit
      541 dvqpgnyilk vhvnpkyivl esdftnnvvr cnihytgryv sttnckivqs
//
LOCUS       XP_061015014             252 aa            linear   MAM 02-DEC-2023
DEFINITION  mast cell protease 1A-like isoform X1 [Dama dama].
ACCESSION   XP_061015014
VERSION     XP_061015014.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159031.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..252
                     /product="mast cell protease 1A-like isoform X1"
                     /calculated_mol_wt=27832
     Region          21..242
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            21
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(64,108,202)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(196,217,219)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..252
                     /gene="LOC133067946"
                     /coded_by="XM_061159031.1:59..817"
                     /db_xref="GeneID:133067946"
ORIGIN      
        1 mvlllllval llsptgeagk iiggheakph srpymaylqi htaenilfcg gflvredfvl
       61 taahclgssi nvtlgahnik kqertqqiit vkraiphpry ndktvtndim llqlkrkakv
      121 ttavspislp wnwdtvnpgm lcsvagwgrl dvdmycpnkl qevqlevqra kkctsrykyy
      181 rtttqicagd pgkrkssfrg dsggplvcns vaqgivsygt kdgtpppvft rissflpwiq
      241 ttmkqyelqg qd
//
LOCUS       XP_061015015             215 aa            linear   MAM 02-DEC-2023
DEFINITION  duodenase-1-like isoform X2 [Dama dama].
ACCESSION   XP_061015015
VERSION     XP_061015015.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159032.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..215
                     /product="duodenase-1-like isoform X2"
                     /calculated_mol_wt=23495
     Region          21..205
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            21
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(64,108,165)
                     /site_type="active"
                     /db_xref="CDD:238113"
     CDS             1..215
                     /gene="LOC133067946"
                     /coded_by="XM_061159032.1:36..683"
                     /db_xref="GeneID:133067946"
ORIGIN      
        1 mvlllllval llsptgeagk iiggheakph srpymaylqi htaenilfcg gflvredfvl
       61 taahclgssi nvtlgahnik kqertqqiit vkraiphpry ndktvtndim llqlkrkakv
      121 ttavspislp wnwdtvnpgm lcsvagwgrl dvdmycpnkl qegdsggplv cnsvaqgivs
      181 ygtkdgtppp vftrissflp wiqttmkqye lqgqd
//
LOCUS       XP_061015016             252 aa            linear   MAM 02-DEC-2023
DEFINITION  mast cell protease 3-like [Dama dama].
ACCESSION   XP_061015016
VERSION     XP_061015016.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159033.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..252
                     /product="mast cell protease 3-like"
                     /calculated_mol_wt=27750
     Region          21..242
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            21
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(64,108,202)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(196,217,219)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..252
                     /gene="LOC133067949"
                     /coded_by="XM_061159033.1:49..807"
                     /db_xref="GeneID:133067949"
ORIGIN      
        1 mvlflllval llsptgeagk iiggheakph srpymaflrf kisgephicg gflvredfvl
       61 taahclgssi dvtlgahnim erertqqvip vrrafphphy nsmtgvndim llqlawkadm
      121 tdavspislp rcwqkvnpgm mcsvagwgql evdmpsadkl qevdlevqse ekciarfryy
      181 ipitqmcagd pnkrkssysg dsggplvcdg vaqgivsyge vygtppnvyt rissfltwiq
      241 ktmrqykqqg sa
//
LOCUS       XP_061015017             252 aa            linear   MAM 02-DEC-2023
DEFINITION  mast cell protease 1A-like [Dama dama].
ACCESSION   XP_061015017
VERSION     XP_061015017.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159034.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..252
                     /product="mast cell protease 1A-like"
                     /calculated_mol_wt=27932
     Region          21..242
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            21
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(64,108,202)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(196,217,219)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..252
                     /gene="LOC133067950"
                     /coded_by="XM_061159034.1:35..793"
                     /db_xref="GeneID:133067950"
ORIGIN      
        1 mvlflllaal llfpigeagk iiggheakph shpymafvey qvsediffcg gflvcedfvl
       61 taahclgssi nvtlgahnir eqertqqvip vrramlhpwy ndktwandim llqlawkadm
      121 tdavspinlp rcwqkvnpgm mcsvagwgrl evdmpsadkl qevdlevqse ekciarfrny
      181 npitqicagd pnkrknsysg dsggplvcdg vaqgivsygr ddgttpdvyt rissflpwiq
      241 ttmrqykcqg sa
//
LOCUS       XP_061015018             255 aa            linear   MAM 02-DEC-2023
DEFINITION  cathepsin G-like [Dama dama].
ACCESSION   XP_061015018
VERSION     XP_061015018.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159035.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..255
                     /product="cathepsin G-like"
                     /calculated_mol_wt=28702
     Region          21..245
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            21
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(64,108,205)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(199,220,222)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..255
                     /gene="LOC133067951"
                     /coded_by="XM_061159035.1:1..768"
                     /db_xref="GeneID:133067951"
ORIGIN      
        1 mrpllllvaf llfpraragq iiggqearph shpymayiqt ltpaglticr gflvredfvm
       61 tgthclgsqi nvilgidsvt asewtqqrip vlrpiphpry nqrnnrndim llqvktlcwr
      121 rvrqneamkl valpqteeml dpgtqctvag wgltglnrra vtlqevqlti qrdgechslf
      181 dfytgqkqic vgdpregkst flgdsggplv cnnvaqgvvs ygdrmgtppa vftrissflp
      241 wirrtmrrfk ewrpe
//
LOCUS       XP_061015020             165 aa            linear   MAM 02-DEC-2023
DEFINITION  mast cell protease 3-like isoform X1 [Dama dama].
ACCESSION   XP_061015020
VERSION     XP_061015020.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159037.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..165
                     /product="mast cell protease 3-like isoform X1"
                     /calculated_mol_wt=18049
     Region          21..155
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            21
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(64,107,115)
                     /site_type="active"
                     /db_xref="CDD:238113"
     CDS             1..165
                     /gene="LOC133067952"
                     /coded_by="XM_061159037.1:12..509"
                     /db_xref="GeneID:133067952"
ORIGIN      
        1 mvlflllval llsptgeagk iiggheakph srpymaflrf kisgkphicg gflvredfvl
       61 taahclgssi dvtlgahnir eqertqqvip vwrtfphpyy nmtgvndiml lqgdsggplv
      121 cngvaqgivs ygkedgtppr vftrissflp wiqttmkqye lqgpd
//
LOCUS       XP_061015021             251 aa            linear   MAM 02-DEC-2023
DEFINITION  mast cell protease 1A-like isoform X2 [Dama dama].
ACCESSION   XP_061015021
VERSION     XP_061015021.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159038.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..251
                     /product="mast cell protease 1A-like isoform X2"
                     /calculated_mol_wt=27656
     Region          21..241
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            21
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(64,107,201)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(195,216,218)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..251
                     /gene="LOC133067952"
                     /coded_by="XM_061159038.1:49..804"
                     /db_xref="GeneID:133067952"
ORIGIN      
        1 mvlflllval llsptgeagk iiggheakph srpymaflrf kisgkphicg gflvredfvl
       61 taahclgssi dvtlgahnir eqertqqvip vwrtfphpyy nmtgvndiml lqltrkakvt
      121 tavspislpr drdtvnpgml csvagwgrlg ldmshpsklq evelevqrak kctsryknyr
      181 tttqicagda rkkkssfrgd sggplvcngv aqgivsygke dgtpprvftr issflpwiqt
      241 tmkqyelqgp d
//
LOCUS       XP_061015022             136 aa            linear   MAM 02-DEC-2023
DEFINITION  mast cell protease 2-like [Dama dama].
ACCESSION   XP_061015022
VERSION     XP_061015022.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159039.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..136
                     /product="mast cell protease 2-like"
                     /calculated_mol_wt=14747
     Region          <1..132
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            order(86,107,109)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..136
                     /gene="LOC133067953"
                     /coded_by="XM_061159039.1:1..411"
                     /db_xref="GeneID:133067953"
ORIGIN      
        1 mllklkekas ltlamgtlsl ppqftfilsg rmcwvagwgk idmkepasst lqemkprlge
       61 pqacslfpaf dhnlqlcvgh pqstkfafkg dsggpllcag vvqgivsygq snakppavft
      121 rishyrpwid evlnen
//
LOCUS       XP_061015023             252 aa            linear   MAM 02-DEC-2023
DEFINITION  mast cell protease 1A-like [Dama dama].
ACCESSION   XP_061015023
VERSION     XP_061015023.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159040.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..252
                     /product="mast cell protease 1A-like"
                     /calculated_mol_wt=27820
     Region          21..242
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            21
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(64,108,202)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(196,217,219)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..252
                     /gene="LOC133067954"
                     /coded_by="XM_061159040.1:49..807"
                     /db_xref="GeneID:133067954"
ORIGIN      
        1 mvlflllval llsptgeagk iiggheakph srpymaflrf kisgkphicg gflvredfvl
       61 taahclgssi dvtlgahsim erertqqvip vrrafphphy ndktfendim llqltrkadm
      121 tdavspislp rsfekvnpgm mcsvagwgrl evnmpsadkl qevdlevqse erciarfrny
      181 ipvtqicagd pnkrknsfsg dsggplvcdg vaqgivsygd vygtapnvyt rissflywiq
      241 ktmrqykqqg sa
//
LOCUS       XP_061015024             250 aa            linear   MAM 02-DEC-2023
DEFINITION  granzyme H-like isoform X1 [Dama dama].
ACCESSION   XP_061015024
VERSION     XP_061015024.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159041.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..250
                     /product="granzyme H-like isoform X1"
                     /calculated_mol_wt=27542
     Region          25..246
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            25
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(68,112,206)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(200,221,223)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..250
                     /gene="LOC133067955"
                     /coded_by="XM_061159041.1:363..1115"
                     /db_xref="GeneID:133067955"
ORIGIN      
        1 mqpllllmaf llppglgqpf lseeiigghe akphsrpyma fiqflgeksw krcggvliqk
       61 dfvltaahcr gssmsvtlga hnikqqertq qviqvrtair hpdynpknfs ndimllqler
      121 kakqtsavkp lslprakarv rpgqmcslag wgqvalgapa tslqeaelmv qedrvcetly
      181 pshysrasqi cvgdprkakt gfkgdsggpl vckkvvhgtf sygtmngrpp gvftqvshfl
      241 pwikrtmkhl
//
LOCUS       XP_061015025             227 aa            linear   MAM 02-DEC-2023
DEFINITION  granzyme H-like isoform X2 [Dama dama].
ACCESSION   XP_061015025
VERSION     XP_061015025.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159042.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..227
                     /product="granzyme H-like isoform X2"
                     /calculated_mol_wt=24817
     Region          25..223
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            25
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(177,198,200)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..227
                     /gene="LOC133067955"
                     /coded_by="XM_061159042.1:362..1045"
                     /db_xref="GeneID:133067955"
ORIGIN      
        1 mqpllllmaf llppglgqpf lseeiigghe akphsrpyma fiqflgeksw krcggvliqk
       61 dfvltaahcr gssmsvtlga hnikqqertq qviqlerkak qtsavkplsl prakarvrpg
      121 qmcslagwgq valgapatsl qeaelmvqed rvcetlypsh ysrasqicvg dprkaktgfk
      181 gdsggplvck kvvhgtfsyg tmngrppgvf tqvshflpwi krtmkhl
//
LOCUS       XP_061015026             251 aa            linear   MAM 02-DEC-2023
DEFINITION  mast cell protease 1A-like [Dama dama].
ACCESSION   XP_061015026
VERSION     XP_061015026.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159043.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..251
                     /product="mast cell protease 1A-like"
                     /calculated_mol_wt=27547
     Region          21..241
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            21
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(63,107,201)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(195,216,218)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..251
                     /gene="LOC133067956"
                     /coded_by="XM_061159043.1:37..792"
                     /db_xref="GeneID:133067956"
ORIGIN      
        1 mvlllllaal llspteeagk iiggheakph srpymaylqi htaenmfcgg flvredfvlt
       61 aahclgssin vtlgahnikk qertqqviam rraipypcyn dktltndiml lqlkrkakvt
      121 tavspislpr dwdtvnpgml csvagwghlg ldmshpnnlq evelevqrak kcasrykyyr
      181 tntqicagdp gerkssfkgd sggplvcngv aqgivsygke dgsppgiftr issflpwiqk
      241 tmkqyelqgp d
//
LOCUS       XP_061015027             210 aa            linear   MAM 02-DEC-2023
DEFINITION  syntaxin-binding protein 6 [Dama dama].
ACCESSION   XP_061015027
VERSION     XP_061015027.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159044.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..210
                     /product="syntaxin-binding protein 6"
                     /calculated_mol_wt=23540
     Region          2..131
                     /region_name="PH-STXBP6"
                     /note="PH-like domain of Syntaxin binding protein 6;
                     cd14681"
                     /db_xref="CDD:270200"
     Region          149..210
                     /region_name="R-SNARE_STXBP6"
                     /note="SNARE domain of STXBP6; cd15892"
                     /db_xref="CDD:277245"
     Site            order(150..151,154..155,157..159,161..166,168..170,
                     172..173,175..176,179..180,182..187,189..191,193..194,
                     196..201,203..204)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277245"
     Site            176
                     /site_type="other"
                     /note="zero layer"
                     /db_xref="CDD:277245"
     CDS             1..210
                     /gene="STXBP6"
                     /coded_by="XM_061159044.1:55..687"
                     /db_xref="GeneID:133067960"
ORIGIN      
        1 msaksaiske ifaplderml gavqvkrrtk kkipflatgg qgeyltyicl svtnkkptqa
       61 sitkvkqfeg stsfvrrsqw mleqlrqvng idpnrdsaef dllfenafdq wvastasekc
      121 tffqilhhtc qryltdrkpe fincqskimg gnsilhsaad svtsavqkas qalnergerl
      181 graeektedm knsaqqfaet ahklamkhkc
//
LOCUS       XP_061015028             210 aa            linear   MAM 02-DEC-2023
DEFINITION  syntaxin-binding protein 6 [Dama dama].
ACCESSION   XP_061015028
VERSION     XP_061015028.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159045.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..210
                     /product="syntaxin-binding protein 6"
                     /calculated_mol_wt=23540
     Region          2..131
                     /region_name="PH-STXBP6"
                     /note="PH-like domain of Syntaxin binding protein 6;
                     cd14681"
                     /db_xref="CDD:270200"
     Region          149..210
                     /region_name="R-SNARE_STXBP6"
                     /note="SNARE domain of STXBP6; cd15892"
                     /db_xref="CDD:277245"
     Site            order(150..151,154..155,157..159,161..166,168..170,
                     172..173,175..176,179..180,182..187,189..191,193..194,
                     196..201,203..204)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277245"
     Site            176
                     /site_type="other"
                     /note="zero layer"
                     /db_xref="CDD:277245"
     CDS             1..210
                     /gene="STXBP6"
                     /coded_by="XM_061159045.1:263..895"
                     /db_xref="GeneID:133067960"
ORIGIN      
        1 msaksaiske ifaplderml gavqvkrrtk kkipflatgg qgeyltyicl svtnkkptqa
       61 sitkvkqfeg stsfvrrsqw mleqlrqvng idpnrdsaef dllfenafdq wvastasekc
      121 tffqilhhtc qryltdrkpe fincqskimg gnsilhsaad svtsavqkas qalnergerl
      181 graeektedm knsaqqfaet ahklamkhkc
//
LOCUS       XP_061015029             293 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase RNF115-like [Dama dama].
ACCESSION   XP_061015029
VERSION     XP_061015029.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159046.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..293
                     /product="E3 ubiquitin-protein ligase RNF115-like"
                     /calculated_mol_wt=32317
     Region          19..49
                     /region_name="zinc_ribbon_9"
                     /note="zinc-ribbon; pfam14369"
                     /db_xref="CDD:433910"
     Region          215..264
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(217,220,235,237,240,243,254,257)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438452"
     CDS             1..293
                     /gene="LOC133067961"
                     /coded_by="XM_061159046.1:106..987"
                     /db_xref="GeneID:133067961"
ORIGIN      
        1 maeasaagag agsavaahrf fchfckgevs pklpeytcpr cesgfieevt ddssflgggs
       61 ststqfsefw drldptmffq dfrpflsssl ldqdnraner shqthtdfwg psrpprlsvt
      121 qryrsrgstr perspaferv lqqiiagfip gspfswsgml dsnpgdyawg qtgldaivtq
      181 llgqlentgp ppadkekits latvtvtqeq vdkglecpvc kedytveeev rqlpcnhyfh
      241 sscivpwlel hdacpvcrks lngedstqqt hssgasassr fssdsqlhdr wtf
//
LOCUS       XP_061015030             507 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA-binding protein Nova-1 isoform X1 [Dama dama].
ACCESSION   XP_061015030
VERSION     XP_061015030.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159047.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..507
                     /product="RNA-binding protein Nova-1 isoform X1"
                     /calculated_mol_wt=51610
     Region          49..121
                     /region_name="KH-I_NOVA_rpt1"
                     /note="first type I K homology (KH) RNA-binding domain
                     found in the family of neuro-oncological ventral antigen
                     (Nova); cd22435"
                     /db_xref="CDD:411863"
     Site            order(61..63,65..69,72..73,83..85,87..89,98)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:411863"
     Region          172..241
                     /region_name="KH-I_NOVA_rpt2"
                     /note="second type I K homology (KH) RNA-binding domain
                     found in the family of neuro-oncological ventral antigen
                     (Nova); cd22436"
                     /db_xref="CDD:411864"
     Site            order(183..185,187..191,194..195,205..207,209..211,219)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:411864"
     Region          422..492
                     /region_name="KH-I_NOVA_rpt3"
                     /note="third type I K homology (KH) RNA-binding domain
                     found in the family of neuro-oncological ventral antigen
                     (Nova); cd09031"
                     /db_xref="CDD:411807"
     Site            order(430..431,433..435,437..441,444..445,455..461,463,
                     468,470)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:411807"
     CDS             1..507
                     /gene="NOVA1"
                     /coded_by="XM_061159047.1:60..1583"
                     /db_xref="GeneID:133067962"
ORIGIN      
        1 mmaaapiqqn gthtgvpidl dppdsrkrpl eappeagstk rtntgedgqy flkvlipsya
       61 agsiigkggq tivqlqketg atiklskskd fypgttervc liqgtvealn avhgfiaeki
      121 rempqnvakt epvsilqpqt tvnpdrikqt lpssptttks spsdpmttsr anqvkiivpn
      181 stagliigkg gatvkaimeq sgawvqlsqk pdginlqerv vtvsgepeqn rkaveliiqk
      241 iqedpqsgsc lnisyanvtg pvansnptgs pyantaevlp taaaaagllg hanlagvaaf
      301 pavlsgftgn dlvaitsaln tlasygynln tlglglsqaa atgalaaaaa sanpaaaaan
      361 llatyaseas asgstaggta gtfalgslaa ataatngyfg aasplaasai lgtekstdgs
      421 kdvveiavpe nlvgailgkg gktlveyqel tgariqiskk gefvpgtrnr kvtitgtpaa
      481 tqaaqylitq rityeqgvra anpqkvg
//
LOCUS       XP_061015032             470 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA-binding protein Nova-1 isoform X2 [Dama dama].
ACCESSION   XP_061015032
VERSION     XP_061015032.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159049.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..470
                     /product="RNA-binding protein Nova-1 isoform X2"
                     /calculated_mol_wt=47906
     Region          12..84
                     /region_name="KH-I_NOVA_rpt1"
                     /note="first type I K homology (KH) RNA-binding domain
                     found in the family of neuro-oncological ventral antigen
                     (Nova); cd22435"
                     /db_xref="CDD:411863"
     Site            order(24..26,28..32,35..36,46..48,50..52,61)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:411863"
     Region          135..204
                     /region_name="KH-I_NOVA_rpt2"
                     /note="second type I K homology (KH) RNA-binding domain
                     found in the family of neuro-oncological ventral antigen
                     (Nova); cd22436"
                     /db_xref="CDD:411864"
     Site            order(146..148,150..154,157..158,168..170,172..174,182)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:411864"
     Region          385..455
                     /region_name="KH-I_NOVA_rpt3"
                     /note="third type I K homology (KH) RNA-binding domain
                     found in the family of neuro-oncological ventral antigen
                     (Nova); cd09031"
                     /db_xref="CDD:411807"
     Site            order(393..394,396..398,400..404,407..408,418..424,426,
                     431,433)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:411807"
     CDS             1..470
                     /gene="NOVA1"
                     /coded_by="XM_061159049.1:28..1440"
                     /db_xref="GeneID:133067962"
ORIGIN      
        1 mhpmhrgred gqyflkvlip syaagsiigk ggqtivqlqk etgatiklsk skdfypgtte
       61 rvcliqgtve alnavhgfia ekirempqnv aktepvsilq pqttvnpdri kqtlpssptt
      121 tksspsdpmt tsranqvkii vpnstaglii gkggatvkai meqsgawvql sqkpdginlq
      181 ervvtvsgep eqnrkaveli iqkiqedpqs gsclnisyan vtgpvansnp tgspyantae
      241 vlptaaaaag llghanlagv aafpavlsgf tgndlvaits alntlasygy nlntlglgls
      301 qaaatgalaa aaasanpaaa aanllatyas easasgstag gtagtfalgs laaataatng
      361 yfgaasplaa sailgtekst dgskdvveia vpenlvgail gkggktlvey qeltgariqi
      421 skkgefvpgt rnrkvtitgt paatqaaqyl itqrityeqg vraanpqkvg
//
LOCUS       XP_061015033             385 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA-binding protein Nova-1 isoform X3 [Dama dama].
ACCESSION   XP_061015033
VERSION     XP_061015033.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159050.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..385
                     /product="RNA-binding protein Nova-1 isoform X3"
                     /calculated_mol_wt=38594
     Region          50..119
                     /region_name="KH-I_NOVA_rpt2"
                     /note="second type I K homology (KH) RNA-binding domain
                     found in the family of neuro-oncological ventral antigen
                     (Nova); cd22436"
                     /db_xref="CDD:411864"
     Site            order(61..63,65..69,72..73,83..85,87..89,97)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:411864"
     Region          300..370
                     /region_name="KH-I_NOVA_rpt3"
                     /note="third type I K homology (KH) RNA-binding domain
                     found in the family of neuro-oncological ventral antigen
                     (Nova); cd09031"
                     /db_xref="CDD:411807"
     Site            order(308..309,311..313,315..319,322..323,333..339,341,
                     346,348)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:411807"
     CDS             1..385
                     /gene="NOVA1"
                     /coded_by="XM_061159050.1:320..1477"
                     /db_xref="GeneID:133067962"
ORIGIN      
        1 mpqnvaktep vsilqpqttv npdrikqtlp ssptttkssp sdpmttsran qvkiivpnst
       61 agliigkgga tvkaimeqsg awvqlsqkpd ginlqervvt vsgepeqnrk aveliiqkiq
      121 edpqsgscln isyanvtgpv ansnptgspy antaevlpta aaaagllgha nlagvaafpa
      181 vlsgftgndl vaitsalntl asygynlntl glglsqaaat galaaaaasa npaaaaanll
      241 atyaseasas gstaggtagt falgslaaat aatngyfgaa splaasailg tekstdgskd
      301 vveiavpenl vgailgkggk tlveyqeltg ariqiskkge fvpgtrnrkv titgtpaatq
      361 aaqylitqri tyeqgvraan pqkvg
//
LOCUS       XP_061015034             385 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA-binding protein Nova-1 isoform X3 [Dama dama].
ACCESSION   XP_061015034
VERSION     XP_061015034.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159051.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..385
                     /product="RNA-binding protein Nova-1 isoform X3"
                     /calculated_mol_wt=38594
     Region          50..119
                     /region_name="KH-I_NOVA_rpt2"
                     /note="second type I K homology (KH) RNA-binding domain
                     found in the family of neuro-oncological ventral antigen
                     (Nova); cd22436"
                     /db_xref="CDD:411864"
     Site            order(61..63,65..69,72..73,83..85,87..89,97)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:411864"
     Region          300..370
                     /region_name="KH-I_NOVA_rpt3"
                     /note="third type I K homology (KH) RNA-binding domain
                     found in the family of neuro-oncological ventral antigen
                     (Nova); cd09031"
                     /db_xref="CDD:411807"
     Site            order(308..309,311..313,315..319,322..323,333..339,341,
                     346,348)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:411807"
     CDS             1..385
                     /gene="NOVA1"
                     /coded_by="XM_061159051.1:381..1538"
                     /db_xref="GeneID:133067962"
ORIGIN      
        1 mpqnvaktep vsilqpqttv npdrikqtlp ssptttkssp sdpmttsran qvkiivpnst
       61 agliigkgga tvkaimeqsg awvqlsqkpd ginlqervvt vsgepeqnrk aveliiqkiq
      121 edpqsgscln isyanvtgpv ansnptgspy antaevlpta aaaagllgha nlagvaafpa
      181 vlsgftgndl vaitsalntl asygynlntl glglsqaaat galaaaaasa npaaaaanll
      241 atyaseasas gstaggtagt falgslaaat aatngyfgaa splaasailg tekstdgskd
      301 vveiavpenl vgailgkggk tlveyqeltg ariqiskkge fvpgtrnrkv titgtpaatq
      361 aaqylitqri tyeqgvraan pqkvg
//
LOCUS       XP_061015035             920 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase D1 isoform X1 [Dama dama].
ACCESSION   XP_061015035
VERSION     XP_061015035.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159052.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..920
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..920
                     /product="serine/threonine-protein kinase D1 isoform X1"
                     /calculated_mol_wt=102247
     Region          140..211
                     /region_name="C1_PKD1_rpt1"
                     /note="first protein kinase C conserved region 1 (C1
                     domain) found in protein kinase D (PKD) and similar
                     proteins; cd20839"
                     /db_xref="CDD:410389"
     Site            order(152..158,166..170,173)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410389"
     Region          245..338
                     /region_name="C1_PKD1_rpt2"
                     /note="second protein kinase C conserved region 1 (C1
                     domain) found in protein kinase D (PKD) and similar
                     proteins; cd20842"
                     /db_xref="CDD:410392"
     Site            order(284..290,298..302,305)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410392"
     Region          424..551
                     /region_name="PH_PKD"
                     /note="Protein kinase D (PKD/PKCmu) pleckstrin homology
                     (PH) domain; cd01239"
                     /db_xref="CDD:269945"
     Region          587..846
                     /region_name="STKc_PKD"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Protein Kinase D; cd14082"
                     /db_xref="CDD:270984"
     Site            order(597..601,605,618,620,651,667..670,673,675,713..714,
                     716,718..719,721,734..735,738,752..756,758)
                     /site_type="active"
                     /db_xref="CDD:270984"
     Site            order(597..600,605,618,620,651,667..670,673,718..719,721,
                     734..735)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270984"
     Site            order(601,673,675,713..714,716,718,738,752..756,758)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270984"
     Site            734..756
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270984"
     CDS             1..920
                     /gene="PRKD1"
                     /coded_by="XM_061159052.1:1..2763"
                     /db_xref="GeneID:133067963"
ORIGIN      
        1 msappvlrpp spllpvaaaa aaaaaalvpg sgpgpapflt pvaapaggis fhlqiglsre
       61 pvlllqdssg dyslahvrem acsivdqkfp ecgfygmydk illfrhdpts enilqlvkta
      121 sdiqegdlie vvlsasatfe dfqirphtlf vhsyrapafc dhcgemlwgl vrqglkcegc
      181 glnyhkrcaf kipnncsgvr rrrlsnvslt glatvrtasa elstsapdep llspvspgfe
      241 qkspsesfig rekrsnsqsy igrpiqldki llskvkvpht fvihsytrpt vcqyckkllk
      301 glfrqglqck dcrfnchkrc apkvpnnclg evtingdlls pgaesdvvme egsddndser
      361 nsglmddmee amvqdaemvm aecqndsgem qdpdpdheds nrtispstsn niplmrvvqs
      421 vkhtkrksss vmkegwmvhy tskdtlrkrh ywrldskcit lfqndtgsry ykeiplseil
      481 slepakpsal ipsganphcf eittanivyy vgenvvnpss pppnssvlts gvgadvarmw
      541 emaiqhalmp vipkgssvgs gtnvhrdisv sisvsncqiq envdistvyq ifpdevlgsg
      601 qfgivyggkh rktgrdvaik iidklrfptk qesqlrneva ilqnlhhpgv vnlecmfetp
      661 ervfvvmekl hgdmlemils sekgrlpehi tkflitqilv alrhlhfkni vhcdlkpenv
      721 llasadpfpq vklcdfgfar iigeksfrrs vvgtpaylap evlrnkgynr sldmwsvgvi
      781 iyvslsgtfp fnededihdq iqnaafmypp npwkeishea idlinnllqv kmrkrysvdk
      841 tlshpwlqdy qtwldlrele ckigeryith esddsrweqy ageqglqypa hlidpgaghr
      901 ggpeteemem kalservsil
//
LOCUS       XP_061015036             912 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase D1 isoform X2 [Dama dama].
ACCESSION   XP_061015036
VERSION     XP_061015036.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159053.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..912
                     /product="serine/threonine-protein kinase D1 isoform X2"
                     /calculated_mol_wt=101446
     Region          140..211
                     /region_name="C1_PKD1_rpt1"
                     /note="first protein kinase C conserved region 1 (C1
                     domain) found in protein kinase D (PKD) and similar
                     proteins; cd20839"
                     /db_xref="CDD:410389"
     Site            order(152..158,166..170,173)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410389"
     Region          237..330
                     /region_name="C1_PKD1_rpt2"
                     /note="second protein kinase C conserved region 1 (C1
                     domain) found in protein kinase D (PKD) and similar
                     proteins; cd20842"
                     /db_xref="CDD:410392"
     Site            order(276..282,290..294,297)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410392"
     Region          416..543
                     /region_name="PH_PKD"
                     /note="Protein kinase D (PKD/PKCmu) pleckstrin homology
                     (PH) domain; cd01239"
                     /db_xref="CDD:269945"
     Region          579..838
                     /region_name="STKc_PKD"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Protein Kinase D; cd14082"
                     /db_xref="CDD:270984"
     Site            order(589..593,597,610,612,643,659..662,665,667,705..706,
                     708,710..711,713,726..727,730,744..748,750)
                     /site_type="active"
                     /db_xref="CDD:270984"
     Site            order(589..592,597,610,612,643,659..662,665,710..711,713,
                     726..727)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270984"
     Site            order(593,665,667,705..706,708,710,730,744..748,750)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270984"
     Site            726..748
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270984"
     CDS             1..912
                     /gene="PRKD1"
                     /coded_by="XM_061159053.1:1..2739"
                     /db_xref="GeneID:133067963"
ORIGIN      
        1 msappvlrpp spllpvaaaa aaaaaalvpg sgpgpapflt pvaapaggis fhlqiglsre
       61 pvlllqdssg dyslahvrem acsivdqkfp ecgfygmydk illfrhdpts enilqlvkta
      121 sdiqegdlie vvlsasatfe dfqirphtlf vhsyrapafc dhcgemlwgl vrqglkcegc
      181 glnyhkrcaf kipnncsgvr rrrlsnvslt glatvrtasa elstsapdep llqkspsesf
      241 igrekrsnsq syigrpiqld killskvkvp htfvihsytr ptvcqyckkl lkglfrqglq
      301 ckdcrfnchk rcapkvpnnc lgevtingdl lspgaesdvv meegsddnds ernsglmddm
      361 eeamvqdaem vmaecqndsg emqdpdpdhe dsnrtispst snniplmrvv qsvkhtkrks
      421 ssvmkegwmv hytskdtlrk rhywrldskc itlfqndtgs ryykeiplse ilslepakps
      481 alipsganph cfeittaniv yyvgenvvnp sspppnssvl tsgvgadvar mwemaiqhal
      541 mpvipkgssv gsgtnvhrdi svsisvsncq iqenvdistv yqifpdevlg sgqfgivygg
      601 khrktgrdva ikiidklrfp tkqesqlrne vailqnlhhp gvvnlecmfe tpervfvvme
      661 klhgdmlemi lssekgrlpe hitkflitqi lvalrhlhfk nivhcdlkpe nvllasadpf
      721 pqvklcdfgf ariigeksfr rsvvgtpayl apevlrnkgy nrsldmwsvg viiyvslsgt
      781 fpfnededih dqiqnaafmy ppnpwkeish eaidlinnll qvkmrkrysv dktlshpwlq
      841 dyqtwldlre leckigeryi thesddsrwe qyageqglqy pahlidpgag hrggpeteem
      901 emkalservs il
//
LOCUS       XP_061015037             751 aa            linear   MAM 02-DEC-2023
DEFINITION  G2/M phase-specific E3 ubiquitin-protein ligase isoform X1 [Dama
            dama].
ACCESSION   XP_061015037
VERSION     XP_061015037.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159054.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..751
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..751
                     /product="G2/M phase-specific E3 ubiquitin-protein ligase
                     isoform X1"
                     /calculated_mol_wt=85486
     Region          39..152
                     /region_name="ePHD_PHF7_G2E3_like"
                     /note="Extended PHD finger found in PHD finger protein 7
                     (PHF7) and G2/M phase-specific E3 ubiquitin-protein ligase
                     (G2E3); cd15669"
                     /db_xref="CDD:277139"
     Site            order(105,114..118,124,147)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277139"
     Region          280..333
                     /region_name="PHD_PHF7_G2E3_like"
                     /note="PHD finger found in PHD finger protein 7 (PHF7) and
                     G2/M phase-specific E3 ubiquitin-protein ligase (G2E3);
                     cd15496"
                     /db_xref="CDD:276971"
     Site            order(280,302..306,310,328)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:276971"
     Site            order(415,444,458,511,682,707..708,711..715,735)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Region          461..739
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cl27008"
                     /db_xref="CDD:474882"
     Site            order(544..545,548,555,557,561..562,564,565,570,584,590)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..751
                     /gene="G2E3"
                     /coded_by="XM_061159054.1:56..2311"
                     /db_xref="GeneID:133067964"
ORIGIN      
        1 macgaaregk sdtaslellp sapckmnenk pggsqnstcv fcrknddcpi kygekktnek
       61 wnltvhyycl lmssgiwqrg keeegvygfl iedirkevtr asklkcsvck ktgasigcva
      121 prckrsyhfp cglqrecifq ftgnfasycw khrpvqiits nncrdsllct iclefiepip
      181 tysvlrspcc knawfhrdcl qrvmdntifg nrndirykrl rntwvqaina gvfffrctic
      241 nnsdifqkem lrmgihipek dasweleena yqellqhyeh cdvrrcrcke grdynvpdsk
      301 weikrcqccg ssgthlacss lqsweqnwec lecrsilysa gefqkakkha lpntnvgind
      361 clleesspkl srqspgdqrk dllrqgskfr rdistliiel gfqvkkkskk vfinkaniwn
      421 saldgfrnqn fnpsytieiv yvnendhfgr eqpgskqefl sllmqqlens plfegslskn
      481 lslnsqalke nlyyeagkmv aislvhggps pgffsqtlfn claygpentq pilddvsdfd
      541 vaqimirvnt aatvadlnsi vndyykylel igclrlitsi sdkymlakdi lvyhvikrvq
      601 apfesfkqgl ktlgvlekiq typeaffhif chkpenlsak ilsdlftvht lsdvqtlgfw
      661 nsylqaledg kstvtmedil ifatgcksip pagfkptpsi eclhmdfpvg nkcnnclalp
      721 itstykefqe smdiaikntl rlekeenphf i
//
LOCUS       XP_061015038             728 aa            linear   MAM 02-DEC-2023
DEFINITION  G2/M phase-specific E3 ubiquitin-protein ligase isoform X2 [Dama
            dama].
ACCESSION   XP_061015038
VERSION     XP_061015038.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159055.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..728
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..728
                     /product="G2/M phase-specific E3 ubiquitin-protein ligase
                     isoform X2"
                     /calculated_mol_wt=82565
     Region          39..152
                     /region_name="ePHD_PHF7_G2E3_like"
                     /note="Extended PHD finger found in PHD finger protein 7
                     (PHF7) and G2/M phase-specific E3 ubiquitin-protein ligase
                     (G2E3); cd15669"
                     /db_xref="CDD:277139"
     Site            order(105,114..118,124,147)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277139"
     Region          257..310
                     /region_name="PHD_PHF7_G2E3_like"
                     /note="PHD finger found in PHD finger protein 7 (PHF7) and
                     G2/M phase-specific E3 ubiquitin-protein ligase (G2E3);
                     cd15496"
                     /db_xref="CDD:276971"
     Site            order(257,279..283,287,305)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:276971"
     Site            order(392,421,435,488,659,684..685,688..692,712)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Region          438..716
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cl27008"
                     /db_xref="CDD:474882"
     Site            order(521..522,525,532,534,538..539,541,542,547,561,564)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..728
                     /gene="G2E3"
                     /coded_by="XM_061159055.1:56..2242"
                     /db_xref="GeneID:133067964"
ORIGIN      
        1 macgaaregk sdtaslellp sapckmnenk pggsqnstcv fcrknddcpi kygekktnek
       61 wnltvhyycl lmssgiwqrg keeegvygfl iedirkevtr asklkcsvck ktgasigcva
      121 prckrsyhfp cglqrecifq ftgnfasycw khrpvqiits nncrdsllct iclefiepip
      181 tysvlrspcc knawfhrdcl qvqainagvf ffrcticnns difqkemlrm gihipekdas
      241 weleenayqe llqhyehcdv rrcrckegrd ynvpdskwei krcqccgssg thlacsslqs
      301 weqnweclec rsilysagef qkakkhalpn tnvgindcll eesspklsrq spgdqrkdll
      361 rqgskfrrdi stliielgfq vkkkskkvfi nkaniwnsal dgfrnqnfnp sytieivyvn
      421 endhfgreqp gskqeflsll mqqlensplf egslsknlsl nsqalkenly yeagkmvais
      481 lvhggpspgf fsqtlfncla ygpentqpil ddvsdfdvaq imirvntaat vadlnsivnd
      541 yykyleligc lrlitsisdk ymlakdilvy hvikrvqapf esfkqglktl gvlekiqtyp
      601 eaffhifchk penlsakils dlftvhtlsd vqtlgfwnsy lqaledgkst vtmedilifa
      661 tgcksippag fkptpsiecl hmdfpvgnkc nnclalpits tykefqesmd iaikntlrle
      721 keenphfi
//
LOCUS       XP_061015039            2610 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase HECTD1 isoform X1 [Dama dama].
ACCESSION   XP_061015039
VERSION     XP_061015039.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159056.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2610
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2610
                     /product="E3 ubiquitin-protein ligase HECTD1 isoform X1"
                     /calculated_mol_wt=289223
     Region          <366..>479
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          366..393
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          396..426
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(397,401..402,405..407,409..410,414,417,426,428,
                     432..433,436..438,440..441,445,448,457,459,461,465..466,
                     469..471,473..474,478)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          428..457
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1107..1240
                     /region_name="Sad1_UNC"
                     /note="Sad1 / UNC-like C-terminal; pfam07738"
                     /db_xref="CDD:400199"
     Region          1277..1335
                     /region_name="MIB_HERC2"
                     /note="Mib_herc2; pfam06701"
                     /db_xref="CDD:461991"
     Region          1893..1958
                     /region_name="BTHB_HectD1"
                     /note="basic tilted helix bundle (BTHB) domain found in
                     HECT domain-containing protein 1 (HectD1) and similar
                     proteins; cd21062"
                     /db_xref="CDD:439138"
     Region          2131..2608
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cd00078"
                     /db_xref="CDD:238033"
     Site            order(2137,2166,2176,2263,2541,2573..2574,2577..2581,2601,
                     2607)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Site            order(2356,2359..2360,2362..2363,2366,2408,2410,
                     2414..2415,2417,2423,2428,2445,2449)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..2610
                     /gene="HECTD1"
                     /coded_by="XM_061159056.1:159..7991"
                     /db_xref="GeneID:133067965"
ORIGIN      
        1 madvdpdtll ewlqmgqgde rdmqlialeq lcmlllmsdn vdrcfetcpp rtflpalcki
       61 fldesapdnv levtaraity yldvsaectr rivgvdgaik alcnrlvvve lnnrtsrdla
      121 eqcvkvleli ctresgavfe agglncvltf irdsghlvhk dtlhsamavv srlcgkmepq
      181 dssleicves lssllkhedh qvsdgalrcf asladrftrr gvdpaplakh glteellsrm
      241 aaaggtvsgp ssackpsrst tgapstaads klsnqvstiv sllstlcrgs pvvthdllrs
      301 elpdsiesal qgdercvldt mrlvdlllvl lfegrkalpk ssagstgrip glrrldssge
      361 rshrqlidci rskdtdalid aidtgafevn fmddvgqtll nwasafgtqe mveflcerga
      421 dvnrgqrsss lhyaacfgrp qvaktllrhg anpdlrdedg ktpldkarer ghsevvailq
      481 spgdwmcpvn kgddkkkkdt nkdeeecnep kgdpemapiy lkrllpvfaq tfqqtmlpsi
      541 rkaslalirk mihfcseall kevcdsdvgh nlptilveit atvldqeddd dghllalqii
      601 rdlvdkggdi fldqlarlgv iskvstlagp ssddeneees kpekedepqe dakelqqgkp
      661 yhwrdwsiir grdclyiwsd aaalelsngs ngwfrfildg klatmyssgs peggsdsses
      721 rsefleklqr argqvkpsts sqpilstpgp tkltvgnwsl tclkegeiai hnsdgqqatv
      781 lkedlpgfvf esnrgtrhsf taetslgsef vtgwtgkrgr klksklektk qkvrtmardl
      841 yddhfkaves mprgvvvtlr niatqlessw elhtnrqgie sentwrdlmk talenlivll
      901 kdentispye mcssglvqal ltvlnntmdl dmkqdcsqlv erinvfktaf seneddesrp
      961 avalirklia vlesierlpl hlydtpgsty nlqiltrrlr frlerapget slidrtgrml
     1021 kmeplatves leqyllkmva kqwydfdrss fvfvrklreg qnfifrhqhd fdengiiywi
     1081 gtnaktayew vnpaayglvv vtssegrnlp ygrledilsr dnsalnchsn ddknawfaid
     1141 lglwvipsay tlrhargygr salrnwvfqv skdgqnwtsl ythvddcsln epgstatwpl
     1201 dppkdekqgw rhvrikqmgk nasgqthyls lsgfelygtv ngvcedqlgk aakeaeanlr
     1261 rqrrlvrsqv lkymvpgarv irgldwkwrd qdgspqgegt vtgelhngwi dvtwdaggsn
     1321 syrmgaegkf dlklapgydp dtvaspkpvs stvsgttqsw sslvknncpd ktsaaagsss
     1381 rkgssssvcs vasssdislg stkterrsei vmehsivsga dvhepivvls saenvpqtev
     1441 gssssastst ltaetgsena erkigpdssa rapgessais mgivsvsspd vssvseltnk
     1501 eaasqrplss sasnrlsvss llaagapmss sasvpnlssr etsslesfvr rvaniartna
     1561 tnnmnlsrss sdnntntlgr nvmstatspl mgaqsfpnlt tpgttstvtm stssvtsssn
     1621 vatattvlsv gqslsntltt sltstssesd tgqeaeysly dfldscrast llaelddded
     1681 lpepdeedde neddnqedqe yeevmilrrp slqrragsrs dvthhavtsq lpqvpagags
     1741 rpigeqeeee yetkggrrrt wdddyvlkrq fsalvpafdp rpgrtnvqqt tdleipppgt
     1801 phselleeve ctpsprlalt lkvtglgttr evelpltnfr stifyyvqkl lqlscngnvk
     1861 sdklrriwep tytimyremk dsdkekengk mgcwsiehve qylgtdelpk ndlitylqkn
     1921 adaaflrhwk ltgtnksirk nrncsqliaa ykdfcehgtk sglnqgaist lqssdilnlt
     1981 keqpqakagn gqnscgvedv lqllrilyiv asdpysrisq eegdeqpqft fppdeftskk
     2041 ittkilqqie eplalasgal pdwceqltsk cpflipfetr qlyftctafg asraivwlqn
     2101 rreatvertr ttssvrrddp gefrvgrlkh ervkvprges lmewaenvmq ihadrksvle
     2161 veflgeegtg lgptlefyal vaaefqrtdl gawlcddnfp ddesrhvdlg gglkppgyyv
     2221 qrscglftap fpqdsdeler itklfhflgi flakciqdnr lvdlpiskpf fklmcmgdik
     2281 snmskliyes rgdrdlhcte sqseasteeg hdslsvgsfe edsksefild ppkpkppawf
     2341 ngiltwedfe lvnphrarfl keikdlaikr rqilsnkgls edekntklqe lvlknpsgsg
     2401 pplsiedlgl nfqfcpssri ygftavdlkp sgedemitmd naeeyvdlmf dfcmhtgiqk
     2461 qmeafrdgfn kvfpmeklss fsheevqmil cgnqspswaa ediinytepk lgytrdspgf
     2521 lrfvrvlcgm ssderkaflq fttgcstlpp gglanlhprl tvvrkvdatd asypsvntcv
     2581 hylklpeyss eeimrerlla atmekgfhln
//
LOCUS       XP_061015040            2608 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase HECTD1 isoform X2 [Dama dama].
ACCESSION   XP_061015040
VERSION     XP_061015040.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159057.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2608
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2608
                     /product="E3 ubiquitin-protein ligase HECTD1 isoform X2"
                     /calculated_mol_wt=288992
     Region          <366..>479
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          366..393
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          396..426
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(397,401..402,405..407,409..410,414,417,426,428,
                     432..433,436..438,440..441,445,448,457,459,461,465..466,
                     469..471,473..474,478)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          428..457
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1107..1240
                     /region_name="Sad1_UNC"
                     /note="Sad1 / UNC-like C-terminal; pfam07738"
                     /db_xref="CDD:400199"
     Region          1277..1335
                     /region_name="MIB_HERC2"
                     /note="Mib_herc2; pfam06701"
                     /db_xref="CDD:461991"
     Region          1891..1956
                     /region_name="BTHB_HectD1"
                     /note="basic tilted helix bundle (BTHB) domain found in
                     HECT domain-containing protein 1 (HectD1) and similar
                     proteins; cd21062"
                     /db_xref="CDD:439138"
     Region          2129..2606
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cd00078"
                     /db_xref="CDD:238033"
     Site            order(2135,2164,2174,2261,2539,2571..2572,2575..2579,2599,
                     2605)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Site            order(2354,2357..2358,2360..2361,2364,2406,2408,
                     2412..2413,2415,2421,2426,2443,2447)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..2608
                     /gene="HECTD1"
                     /coded_by="XM_061159057.1:159..7985"
                     /db_xref="GeneID:133067965"
ORIGIN      
        1 madvdpdtll ewlqmgqgde rdmqlialeq lcmlllmsdn vdrcfetcpp rtflpalcki
       61 fldesapdnv levtaraity yldvsaectr rivgvdgaik alcnrlvvve lnnrtsrdla
      121 eqcvkvleli ctresgavfe agglncvltf irdsghlvhk dtlhsamavv srlcgkmepq
      181 dssleicves lssllkhedh qvsdgalrcf asladrftrr gvdpaplakh glteellsrm
      241 aaaggtvsgp ssackpsrst tgapstaads klsnqvstiv sllstlcrgs pvvthdllrs
      301 elpdsiesal qgdercvldt mrlvdlllvl lfegrkalpk ssagstgrip glrrldssge
      361 rshrqlidci rskdtdalid aidtgafevn fmddvgqtll nwasafgtqe mveflcerga
      421 dvnrgqrsss lhyaacfgrp qvaktllrhg anpdlrdedg ktpldkarer ghsevvailq
      481 spgdwmcpvn kgddkkkkdt nkdeeecnep kgdpemapiy lkrllpvfaq tfqqtmlpsi
      541 rkaslalirk mihfcseall kevcdsdvgh nlptilveit atvldqeddd dghllalqii
      601 rdlvdkggdi fldqlarlgv iskvstlagp ssddeneees kpekedepqe dakelqqgkp
      661 yhwrdwsiir grdclyiwsd aaalelsngs ngwfrfildg klatmyssgs peggsdsses
      721 rsefleklqr argqvkpsts sqpilstpgp tkltvgnwsl tclkegeiai hnsdgqqatv
      781 lkedlpgfvf esnrgtrhsf taetslgsef vtgwtgkrgr klksklektk qkvrtmardl
      841 yddhfkaves mprgvvvtlr niatqlessw elhtnrqgie sentwrdlmk talenlivll
      901 kdentispye mcssglvqal ltvlnntmdl dmkqdcsqlv erinvfktaf seneddesrp
      961 avalirklia vlesierlpl hlydtpgsty nlqiltrrlr frlerapget slidrtgrml
     1021 kmeplatves leqyllkmva kqwydfdrss fvfvrklreg qnfifrhqhd fdengiiywi
     1081 gtnaktayew vnpaayglvv vtssegrnlp ygrledilsr dnsalnchsn ddknawfaid
     1141 lglwvipsay tlrhargygr salrnwvfqv skdgqnwtsl ythvddcsln epgstatwpl
     1201 dppkdekqgw rhvrikqmgk nasgqthyls lsgfelygtv ngvcedqlgk aakeaeanlr
     1261 rqrrlvrsqv lkymvpgarv irgldwkwrd qdgspqgegt vtgelhngwi dvtwdaggsn
     1321 syrmgaegkf dlklapgydp dtvaspkpvs stvsgttqsw sslvknncpd ktsaaagsss
     1381 rkgssssvcs vasssdislg stkterrsei vmehsivsga dvhepivvls saenvpqtev
     1441 gssssastst ltaetgsena erkigpdssa rapgessais mgivsvsspd vssvseltnk
     1501 eaasqrplss sasnrlsvss llaagapmss sasvpnlssr etsslesfvr rvaniartna
     1561 tnnmnlsrss sdnntntlgr nvmstatspl mgaqsfpnlt tpgttstvtm stssvtsssn
     1621 vatattvlsv gqslsntltt sltstssesd tgqeaeysly dfldscrast llaelddded
     1681 lpepdeedde neddnqedqe yeeilrrpsl qrragsrsdv thhavtsqlp qvpagagsrp
     1741 igeqeeeeye tkggrrrtwd ddyvlkrqfs alvpafdprp grtnvqqttd leipppgtph
     1801 selleevect psprlaltlk vtglgttrev elpltnfrst ifyyvqkllq lscngnvksd
     1861 klrriwepty timyremkds dkekengkmg cwsiehveqy lgtdelpknd litylqknad
     1921 aaflrhwklt gtnksirknr ncsqliaayk dfcehgtksg lnqgaistlq ssdilnltke
     1981 qpqakagngq nscgvedvlq llrilyivas dpysrisqee gdeqpqftfp pdeftskkit
     2041 tkilqqieep lalasgalpd wceqltskcp flipfetrql yftctafgas raivwlqnrr
     2101 eatvertrtt ssvrrddpge frvgrlkher vkvprgeslm ewaenvmqih adrksvleve
     2161 flgeegtglg ptlefyalva aefqrtdlga wlcddnfpdd esrhvdlggg lkppgyyvqr
     2221 scglftapfp qdsdelerit klfhflgifl akciqdnrlv dlpiskpffk lmcmgdiksn
     2281 mskliyesrg drdlhctesq seasteeghd slsvgsfeed sksefildpp kpkppawfng
     2341 iltwedfelv nphrarflke ikdlaikrrq ilsnkglsed ekntklqelv lknpsgsgpp
     2401 lsiedlglnf qfcpssriyg ftavdlkpsg edemitmdna eeyvdlmfdf cmhtgiqkqm
     2461 eafrdgfnkv fpmeklssfs heevqmilcg nqspswaaed iinytepklg ytrdspgflr
     2521 fvrvlcgmss derkaflqft tgcstlppgg lanlhprltv vrkvdatdas ypsvntcvhy
     2581 lklpeyssee imrerllaat mekgfhln
//
LOCUS       XP_061015041            2563 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase HECTD1 isoform X3 [Dama dama].
ACCESSION   XP_061015041
VERSION     XP_061015041.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159058.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2563
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2563
                     /product="E3 ubiquitin-protein ligase HECTD1 isoform X3"
                     /calculated_mol_wt=284309
     Region          <366..>479
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          366..393
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          396..426
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(397,401..402,405..407,409..410,414,417,426,428,
                     432..433,436..438,440..441,445,448,457,459,461,465..466,
                     469..471,473..474,478)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          428..457
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1107..1240
                     /region_name="Sad1_UNC"
                     /note="Sad1 / UNC-like C-terminal; pfam07738"
                     /db_xref="CDD:400199"
     Region          1277..>1321
                     /region_name="MIB_HERC2"
                     /note="Mib_herc2; pfam06701"
                     /db_xref="CDD:461991"
     Region          1846..1911
                     /region_name="BTHB_HectD1"
                     /note="basic tilted helix bundle (BTHB) domain found in
                     HECT domain-containing protein 1 (HectD1) and similar
                     proteins; cd21062"
                     /db_xref="CDD:439138"
     Region          2084..2561
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cd00078"
                     /db_xref="CDD:238033"
     Site            order(2090,2119,2129,2216,2494,2526..2527,2530..2534,2554,
                     2560)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Site            order(2309,2312..2313,2315..2316,2319,2361,2363,
                     2367..2368,2370,2376,2381,2398,2402)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..2563
                     /gene="HECTD1"
                     /coded_by="XM_061159058.1:159..7850"
                     /db_xref="GeneID:133067965"
ORIGIN      
        1 madvdpdtll ewlqmgqgde rdmqlialeq lcmlllmsdn vdrcfetcpp rtflpalcki
       61 fldesapdnv levtaraity yldvsaectr rivgvdgaik alcnrlvvve lnnrtsrdla
      121 eqcvkvleli ctresgavfe agglncvltf irdsghlvhk dtlhsamavv srlcgkmepq
      181 dssleicves lssllkhedh qvsdgalrcf asladrftrr gvdpaplakh glteellsrm
      241 aaaggtvsgp ssackpsrst tgapstaads klsnqvstiv sllstlcrgs pvvthdllrs
      301 elpdsiesal qgdercvldt mrlvdlllvl lfegrkalpk ssagstgrip glrrldssge
      361 rshrqlidci rskdtdalid aidtgafevn fmddvgqtll nwasafgtqe mveflcerga
      421 dvnrgqrsss lhyaacfgrp qvaktllrhg anpdlrdedg ktpldkarer ghsevvailq
      481 spgdwmcpvn kgddkkkkdt nkdeeecnep kgdpemapiy lkrllpvfaq tfqqtmlpsi
      541 rkaslalirk mihfcseall kevcdsdvgh nlptilveit atvldqeddd dghllalqii
      601 rdlvdkggdi fldqlarlgv iskvstlagp ssddeneees kpekedepqe dakelqqgkp
      661 yhwrdwsiir grdclyiwsd aaalelsngs ngwfrfildg klatmyssgs peggsdsses
      721 rsefleklqr argqvkpsts sqpilstpgp tkltvgnwsl tclkegeiai hnsdgqqatv
      781 lkedlpgfvf esnrgtrhsf taetslgsef vtgwtgkrgr klksklektk qkvrtmardl
      841 yddhfkaves mprgvvvtlr niatqlessw elhtnrqgie sentwrdlmk talenlivll
      901 kdentispye mcssglvqal ltvlnntmdl dmkqdcsqlv erinvfktaf seneddesrp
      961 avalirklia vlesierlpl hlydtpgsty nlqiltrrlr frlerapget slidrtgrml
     1021 kmeplatves leqyllkmva kqwydfdrss fvfvrklreg qnfifrhqhd fdengiiywi
     1081 gtnaktayew vnpaayglvv vtssegrnlp ygrledilsr dnsalnchsn ddknawfaid
     1141 lglwvipsay tlrhargygr salrnwvfqv skdgqnwtsl ythvddcsln epgstatwpl
     1201 dppkdekqgw rhvrikqmgk nasgqthyls lsgfelygtv ngvcedqlgk aakeaeanlr
     1261 rqrrlvrsqv lkymvpgarv irgldwkwrd qdgspqgegt vtgelhngtt qswsslvknn
     1321 cpdktsaaag sssrkgssss vcsvasssdi slgstkterr seivmehsiv sgadvhepiv
     1381 vlssaenvpq tevgssssas tstltaetgs enaerkigpd ssarapgess aismgivsvs
     1441 spdvssvsel tnkeaasqrp lsssasnrls vssllaagap msssasvpnl ssretssles
     1501 fvrrvaniar tnatnnmnls rsssdnntnt lgrnvmstat splmgaqsfp nlttpgttst
     1561 vtmstssvts ssnvatattv lsvgqslsnt lttsltstss esdtgqeaey slydfldscr
     1621 astllaeldd dedlpepdee ddeneddnqe dqeyeevmil rrpslqrrag srsdvthhav
     1681 tsqlpqvpag agsrpigeqe eeeyetkggr rrtwdddyvl krqfsalvpa fdprpgrtnv
     1741 qqttdleipp pgtphselle evectpsprl altlkvtglg ttrevelplt nfrstifyyv
     1801 qkllqlscng nvksdklrri weptytimyr emkdsdkeke ngkmgcwsie hveqylgtde
     1861 lpkndlityl qknadaaflr hwkltgtnks irknrncsql iaaykdfceh gtksglnqga
     1921 istlqssdil nltkeqpqak agngqnscgv edvlqllril yivasdpysr isqeegdeqp
     1981 qftfppdeft skkittkilq qieeplalas galpdwceql tskcpflipf etrqlyftct
     2041 afgasraivw lqnrreatve rtrttssvrr ddpgefrvgr lkhervkvpr geslmewaen
     2101 vmqihadrks vleveflgee gtglgptlef yalvaaefqr tdlgawlcdd nfpddesrhv
     2161 dlggglkppg yyvqrscglf tapfpqdsde leritklfhf lgiflakciq dnrlvdlpis
     2221 kpffklmcmg diksnmskli yesrgdrdlh ctesqseast eeghdslsvg sfeedsksef
     2281 ildppkpkpp awfngiltwe dfelvnphra rflkeikdla ikrrqilsnk glsedekntk
     2341 lqelvlknps gsgpplsied lglnfqfcps sriygftavd lkpsgedemi tmdnaeeyvd
     2401 lmfdfcmhtg iqkqmeafrd gfnkvfpmek lssfsheevq milcgnqsps waaediinyt
     2461 epklgytrds pgflrfvrvl cgmssderka flqfttgcst lppgglanlh prltvvrkvd
     2521 atdasypsvn tcvhylklpe ysseeimrer llaatmekgf hln
//
LOCUS       XP_061015042            2549 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase HECTD1 isoform X4 [Dama dama].
ACCESSION   XP_061015042
VERSION     XP_061015042.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159059.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2549
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2549
                     /product="E3 ubiquitin-protein ligase HECTD1 isoform X4"
                     /calculated_mol_wt=282175
     Region          <366..>479
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          366..393
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          396..426
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(397,401..402,405..407,409..410,414,417,426,428,
                     432..433,436..438,440..441,445,448,457,459,461,465..466,
                     469..471,473..474,478)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          428..457
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1107..1240
                     /region_name="Sad1_UNC"
                     /note="Sad1 / UNC-like C-terminal; pfam07738"
                     /db_xref="CDD:400199"
     Region          1277..1335
                     /region_name="MIB_HERC2"
                     /note="Mib_herc2; pfam06701"
                     /db_xref="CDD:461991"
     Region          2070..2547
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cd00078"
                     /db_xref="CDD:238033"
     Site            order(2076,2105,2115,2202,2480,2512..2513,2516..2520,2540,
                     2546)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Site            order(2295,2298..2299,2301..2302,2305,2347,2349,
                     2353..2354,2356,2362,2367,2384,2388)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..2549
                     /gene="HECTD1"
                     /coded_by="XM_061159059.1:159..7808"
                     /db_xref="GeneID:133067965"
ORIGIN      
        1 madvdpdtll ewlqmgqgde rdmqlialeq lcmlllmsdn vdrcfetcpp rtflpalcki
       61 fldesapdnv levtaraity yldvsaectr rivgvdgaik alcnrlvvve lnnrtsrdla
      121 eqcvkvleli ctresgavfe agglncvltf irdsghlvhk dtlhsamavv srlcgkmepq
      181 dssleicves lssllkhedh qvsdgalrcf asladrftrr gvdpaplakh glteellsrm
      241 aaaggtvsgp ssackpsrst tgapstaads klsnqvstiv sllstlcrgs pvvthdllrs
      301 elpdsiesal qgdercvldt mrlvdlllvl lfegrkalpk ssagstgrip glrrldssge
      361 rshrqlidci rskdtdalid aidtgafevn fmddvgqtll nwasafgtqe mveflcerga
      421 dvnrgqrsss lhyaacfgrp qvaktllrhg anpdlrdedg ktpldkarer ghsevvailq
      481 spgdwmcpvn kgddkkkkdt nkdeeecnep kgdpemapiy lkrllpvfaq tfqqtmlpsi
      541 rkaslalirk mihfcseall kevcdsdvgh nlptilveit atvldqeddd dghllalqii
      601 rdlvdkggdi fldqlarlgv iskvstlagp ssddeneees kpekedepqe dakelqqgkp
      661 yhwrdwsiir grdclyiwsd aaalelsngs ngwfrfildg klatmyssgs peggsdsses
      721 rsefleklqr argqvkpsts sqpilstpgp tkltvgnwsl tclkegeiai hnsdgqqatv
      781 lkedlpgfvf esnrgtrhsf taetslgsef vtgwtgkrgr klksklektk qkvrtmardl
      841 yddhfkaves mprgvvvtlr niatqlessw elhtnrqgie sentwrdlmk talenlivll
      901 kdentispye mcssglvqal ltvlnntmdl dmkqdcsqlv erinvfktaf seneddesrp
      961 avalirklia vlesierlpl hlydtpgsty nlqiltrrlr frlerapget slidrtgrml
     1021 kmeplatves leqyllkmva kqwydfdrss fvfvrklreg qnfifrhqhd fdengiiywi
     1081 gtnaktayew vnpaayglvv vtssegrnlp ygrledilsr dnsalnchsn ddknawfaid
     1141 lglwvipsay tlrhargygr salrnwvfqv skdgqnwtsl ythvddcsln epgstatwpl
     1201 dppkdekqgw rhvrikqmgk nasgqthyls lsgfelygtv ngvcedqlgk aakeaeanlr
     1261 rqrrlvrsqv lkymvpgarv irgldwkwrd qdgspqgegt vtgelhngwi dvtwdaggsn
     1321 syrmgaegkf dlklapgydp dtvaspkpvs stvsgttqsw sslvknncpd ktsaaagsss
     1381 rkgssssvcs vasssdislg stkterrsei vmehsivsga dvhepivvls saenvpqtev
     1441 gssssastst ltaetgsena erkigpdssa rapgessais mgivsvsspd vssvseltnk
     1501 eaasqrplss sasnrlsvss llaagapmss sasvpnlssr etsslesfvr rvaniartna
     1561 tnnmnlsrss sdnntntlgr nvmstatspl mgaqsfpnlt tpgttstvtm stssvtsssn
     1621 vatattvlsv gqslsntltt sltstssesd tgqeaeysly dfldscrast llaelddded
     1681 lpepdeedde neddnqedqe yeevmilrrp slqrragsrs dvthhavtsq lpqvpagags
     1741 rpigeqeeee yetkggrrrt wdddyvlkrq fsalvpafdp rpgrtnvqqt tdleipppgt
     1801 phselleeve ctpsprlalt lkvtglgttr evelpltnfr stifyyvqkl lqlscngnvk
     1861 sdklrriwep tytimyremk dsdkekengk mdfcehgtks glnqgaistl qssdilnltk
     1921 eqpqakagng qnscgvedvl qllrilyiva sdpysrisqe egdeqpqftf ppdeftskki
     1981 ttkilqqiee plalasgalp dwceqltskc pflipfetrq lyftctafga sraivwlqnr
     2041 reatvertrt tssvrrddpg efrvgrlkhe rvkvprgesl mewaenvmqi hadrksvlev
     2101 eflgeegtgl gptlefyalv aaefqrtdlg awlcddnfpd desrhvdlgg glkppgyyvq
     2161 rscglftapf pqdsdeleri tklfhflgif lakciqdnrl vdlpiskpff klmcmgdiks
     2221 nmskliyesr gdrdlhctes qseasteegh dslsvgsfee dsksefildp pkpkppawfn
     2281 giltwedfel vnphrarflk eikdlaikrr qilsnkglse dekntklqel vlknpsgsgp
     2341 plsiedlgln fqfcpssriy gftavdlkps gedemitmdn aeeyvdlmfd fcmhtgiqkq
     2401 meafrdgfnk vfpmeklssf sheevqmilc gnqspswaae diinytepkl gytrdspgfl
     2461 rfvrvlcgms sderkaflqf ttgcstlppg glanlhprlt vvrkvdatda sypsvntcvh
     2521 ylklpeysse eimrerllaa tmekgfhln
//
LOCUS       XP_061015043            2331 aa            linear   MAM 02-DEC-2023
DEFINITION  E3 ubiquitin-protein ligase HECTD1 isoform X5 [Dama dama].
ACCESSION   XP_061015043
VERSION     XP_061015043.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159060.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2331
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2331
                     /product="E3 ubiquitin-protein ligase HECTD1 isoform X5"
                     /calculated_mol_wt=260730
     Region          <366..>479
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          366..393
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          396..426
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(397,401..402,405..407,409..410,414,417,426,428,
                     432..433,436..438,440..441,445,448,457,459,461,465..466,
                     469..471,473..474,478)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          428..457
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1107..1240
                     /region_name="Sad1_UNC"
                     /note="Sad1 / UNC-like C-terminal; pfam07738"
                     /db_xref="CDD:400199"
     Region          1277..>1302
                     /region_name="MIB_HERC2"
                     /note="Mib_herc2; pfam06701"
                     /db_xref="CDD:461991"
     Region          1614..1679
                     /region_name="BTHB_HectD1"
                     /note="basic tilted helix bundle (BTHB) domain found in
                     HECT domain-containing protein 1 (HectD1) and similar
                     proteins; cd21062"
                     /db_xref="CDD:439138"
     Region          1852..2329
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cd00078"
                     /db_xref="CDD:238033"
     Site            order(1858,1887,1897,1984,2262,2294..2295,2298..2302,2322,
                     2328)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Site            order(2077,2080..2081,2083..2084,2087,2129,2131,
                     2135..2136,2138,2144,2149,2166,2170)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..2331
                     /gene="HECTD1"
                     /coded_by="XM_061159060.1:159..7154"
                     /db_xref="GeneID:133067965"
ORIGIN      
        1 madvdpdtll ewlqmgqgde rdmqlialeq lcmlllmsdn vdrcfetcpp rtflpalcki
       61 fldesapdnv levtaraity yldvsaectr rivgvdgaik alcnrlvvve lnnrtsrdla
      121 eqcvkvleli ctresgavfe agglncvltf irdsghlvhk dtlhsamavv srlcgkmepq
      181 dssleicves lssllkhedh qvsdgalrcf asladrftrr gvdpaplakh glteellsrm
      241 aaaggtvsgp ssackpsrst tgapstaads klsnqvstiv sllstlcrgs pvvthdllrs
      301 elpdsiesal qgdercvldt mrlvdlllvl lfegrkalpk ssagstgrip glrrldssge
      361 rshrqlidci rskdtdalid aidtgafevn fmddvgqtll nwasafgtqe mveflcerga
      421 dvnrgqrsss lhyaacfgrp qvaktllrhg anpdlrdedg ktpldkarer ghsevvailq
      481 spgdwmcpvn kgddkkkkdt nkdeeecnep kgdpemapiy lkrllpvfaq tfqqtmlpsi
      541 rkaslalirk mihfcseall kevcdsdvgh nlptilveit atvldqeddd dghllalqii
      601 rdlvdkggdi fldqlarlgv iskvstlagp ssddeneees kpekedepqe dakelqqgkp
      661 yhwrdwsiir grdclyiwsd aaalelsngs ngwfrfildg klatmyssgs peggsdsses
      721 rsefleklqr argqvkpsts sqpilstpgp tkltvgnwsl tclkegeiai hnsdgqqatv
      781 lkedlpgfvf esnrgtrhsf taetslgsef vtgwtgkrgr klksklektk qkvrtmardl
      841 yddhfkaves mprgvvvtlr niatqlessw elhtnrqgie sentwrdlmk talenlivll
      901 kdentispye mcssglvqal ltvlnntmdl dmkqdcsqlv erinvfktaf seneddesrp
      961 avalirklia vlesierlpl hlydtpgsty nlqiltrrlr frlerapget slidrtgrml
     1021 kmeplatves leqyllkmva kqwydfdrss fvfvrklreg qnfifrhqhd fdengiiywi
     1081 gtnaktayew vnpaayglvv vtssegrnlp ygrledilsr dnsalnchsn ddknawfaid
     1141 lglwvipsay tlrhargygr salrnwvfqv skdgqnwtsl ythvddcsln epgstatwpl
     1201 dppkdekqgw rhvrikqmgk nasgqthyls lsgfelygtv ngvcedqlgk aakeaeanlr
     1261 rqrrlvrsqv lkymvpgarv irgldwkwrd qdgspqgegt vtgelhnasp lmgaqsfpnl
     1321 ttpgttstvt mstssvtsss nvatattvls vgqslsntlt tsltstsses dtgqeaeysl
     1381 ydfldscras tllaelddde dlpepdeedd eneddnqedq eyeevmilrr pslqrragsr
     1441 sdvthhavts qlpqvpagag srpigeqeee eyetkggrrr twdddyvlkr qfsalvpafd
     1501 prpgrtnvqq ttdleipppg tphselleev ectpsprlal tlkvtglgtt revelpltnf
     1561 rstifyyvqk llqlscngnv ksdklrriwe ptytimyrem kdsdkekeng kmgcwsiehv
     1621 eqylgtdelp kndlitylqk nadaaflrhw kltgtnksir knrncsqlia aykdfcehgt
     1681 ksglnqgais tlqssdilnl tkeqpqakag ngqnscgved vlqllrilyi vasdpysris
     1741 qeegdeqpqf tfppdeftsk kittkilqqi eeplalasga lpdwceqlts kcpflipfet
     1801 rqlyftctaf gasraivwlq nrreatvert rttssvrrdd pgefrvgrlk hervkvprge
     1861 slmewaenvm qihadrksvl eveflgeegt glgptlefya lvaaefqrtd lgawlcddnf
     1921 pddesrhvdl ggglkppgyy vqrscglfta pfpqdsdele ritklfhflg iflakciqdn
     1981 rlvdlpiskp ffklmcmgdi ksnmskliye srgdrdlhct esqseastee ghdslsvgsf
     2041 eedsksefil dppkpkppaw fngiltwedf elvnphrarf lkeikdlaik rrqilsnkgl
     2101 sedekntklq elvlknpsgs gpplsiedlg lnfqfcpssr iygftavdlk psgedemitm
     2161 dnaeeyvdlm fdfcmhtgiq kqmeafrdgf nkvfpmekls sfsheevqmi lcgnqspswa
     2221 aediinytep klgytrdspg flrfvrvlcg mssderkafl qfttgcstlp pgglanlhpr
     2281 ltvvrkvdat dasypsvntc vhylklpeys seeimrerll aatmekgfhl n
//
LOCUS       XP_061015044            2046 aa            linear   MAM 02-DEC-2023
DEFINITION  HEAT repeat-containing protein 5A isoform X1 [Dama dama].
ACCESSION   XP_061015044
VERSION     XP_061015044.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159061.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2046
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2046
                     /product="HEAT repeat-containing protein 5A isoform X1"
                     /calculated_mol_wt=221402
     Region          97..121
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            order(113..114,117,120..121,154..155,158,161..162,165,
                     195..196,199,202..203,206,236..237,240,243..244)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          137..165
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          177..207
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          218..244
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          1264..1466
                     /region_name="Laa1_Sip1_HTR5"
                     /note="Laa1/Sip1/HEATR5 HEAT repeat region; pfam20210"
                     /db_xref="CDD:466361"
     CDS             1..2046
                     /gene="HEATR5A"
                     /coded_by="XM_061159061.1:369..6509"
                     /db_xref="GeneID:133067967"
ORIGIN      
        1 melahsllln eeaynqlgev qkaefifdwl rylekllvat srsdvrekqk tlveqllsll
       61 nsspgpptrk llaknlally sigdtfsvye tidkcndlir skddspsylp tklaavvclg
      121 slykklgril gntftdtvgn ilkamksaes qgryeimlsl qnilnglgaa atpchrdvyk
      181 aarscltdrs mavrcaaakc llelqneavf mwstdldsva tlcfksfegs nydvrisvsk
      241 llgtvlakai iskhpgaaas rqstrrvsle evlellgtgf lrgssgflra sgdmlkgtss
      301 vsrdvrvgvt qayvvfistl ggtwleknfa aflshilslv sqshpkatqt qidavcsrrc
      361 vsfilratvg gllgekaqia aakdicqaiw klkkvmdavm sdgnletrlg sadvaasqhm
      421 lvcalqelgn lihslgttaa pllqdssagi ldnvisvtlh psvsvrlaaa wclhciaval
      481 psyltplldr clerltvlks speavtgfsf avaallgavk hcplgiphgk gkiimalaed
      541 llcsaaqnsr lsaqrtqagw lliaalmtlg pafvghhlar vlllwkcvfp vspevlesek
      601 srgdsftwqv tlegragalc aiksfvahcg dllteeviqh lvpplpcavd lltqlssilk
      661 tygsplktps vvyrqrlyel lillspetye gnlsailkel aadltapdiq vgastfllpp
      721 lchqddllil spllqetdhr fieeqlllgs giacgsleyd pysiyekdve gdsvpkplpp
      781 tlsvtssavk lfgvvcahvg eaqrllvleq lldsikhtkg arqqvvqlhv vsavssflky
      841 vagskghlgp eevrrpvlal vmgalespnp llrcaaaeaw arlaqvvddg vftaalaqvs
      901 fdklksarda vtrtghslal gslhrylggi ssqhlnscvg ilytlsqdst spdvqtwalh
      961 slsliidssg plyhthaept lsliimllln vppthaevhq slgcclnali ttlgpelqgn
     1021 stsvstlrss cllgcavmqd npdclvqaqa isclqqlhmf aprhvnlssl vsclcvnlcs
     1081 pylllrravl aclrqlvqre aaevsehavm laknsgeelt ldanirevgl egalltlldk
     1141 etdrklchdi ketlnhmlts mavdklsfwl klckdvlaas adfaavtcvd tmqeeegdrg
     1201 ddasvltsrs dgrphpftnp rwatrvfaae cvcriitqce nahsahfdva laqdlkkkds
     1261 rsdflvlhla dlirmafmaa tdhsdqlrls gletllvvir rfaaipepef pghvileqyq
     1321 anvgaalrpa ftsetppdvt akacqvcsaw iasgvvsdln dirrvhqllv asltkiqvgk
     1381 ealshlynes astmeilavl kawaevyiia verhknhrqp lktppacsee svgngsispd
     1441 glldlvhadl gtlsrlwlaa lqdfalltlp sefasqlpve ggafytaets enaklhyyns
     1501 walilhatal wltgtgfvva dpdegapnls rpvtptsmcq gsssgptvks pedvyterfh
     1561 lilgisvkfl cslrsdatme sitaclhalq alldvpwprs kigsdqdlgi ellnvlhrvi
     1621 ltrespsiql aslevvrqii caaqehvkek rrsaevddga aeketlpefg egkdtgglvp
     1681 gkslvfatle lcvcilvrql pglnpkltgs pgvkaakpqm lsedgsrlvs aalvilselp
     1741 avcspegsis ilptilylti gvlretavkl pggqlsstva aslqalkgil aspmaraeks
     1801 htawtdllrs alttildcwd pvdgthqeld evslltaitv filstspevt tipclqkrci
     1861 ekfkatleik dpmvqiktyq lllsifqypn pavsypyiys lvssiveklq eidrrkpeet
     1921 telqifqegi kvlealvava eeqhrsqlva cllpilisfl ldenalgsat simrnlhdfa
     1981 lqnlmqigpq yssvfksvma sspalkarle aaikgnqetv kvktptskht dnsgksssiq
     2041 lktnfl
//
LOCUS       XP_061015045            2046 aa            linear   MAM 02-DEC-2023
DEFINITION  HEAT repeat-containing protein 5A isoform X1 [Dama dama].
ACCESSION   XP_061015045
VERSION     XP_061015045.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159062.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2046
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2046
                     /product="HEAT repeat-containing protein 5A isoform X1"
                     /calculated_mol_wt=221402
     Region          97..121
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            order(113..114,117,120..121,154..155,158,161..162,165,
                     195..196,199,202..203,206,236..237,240,243..244)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          137..165
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          177..207
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          218..244
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          1264..1466
                     /region_name="Laa1_Sip1_HTR5"
                     /note="Laa1/Sip1/HEATR5 HEAT repeat region; pfam20210"
                     /db_xref="CDD:466361"
     CDS             1..2046
                     /gene="HEATR5A"
                     /coded_by="XM_061159062.1:302..6442"
                     /db_xref="GeneID:133067967"
ORIGIN      
        1 melahsllln eeaynqlgev qkaefifdwl rylekllvat srsdvrekqk tlveqllsll
       61 nsspgpptrk llaknlally sigdtfsvye tidkcndlir skddspsylp tklaavvclg
      121 slykklgril gntftdtvgn ilkamksaes qgryeimlsl qnilnglgaa atpchrdvyk
      181 aarscltdrs mavrcaaakc llelqneavf mwstdldsva tlcfksfegs nydvrisvsk
      241 llgtvlakai iskhpgaaas rqstrrvsle evlellgtgf lrgssgflra sgdmlkgtss
      301 vsrdvrvgvt qayvvfistl ggtwleknfa aflshilslv sqshpkatqt qidavcsrrc
      361 vsfilratvg gllgekaqia aakdicqaiw klkkvmdavm sdgnletrlg sadvaasqhm
      421 lvcalqelgn lihslgttaa pllqdssagi ldnvisvtlh psvsvrlaaa wclhciaval
      481 psyltplldr clerltvlks speavtgfsf avaallgavk hcplgiphgk gkiimalaed
      541 llcsaaqnsr lsaqrtqagw lliaalmtlg pafvghhlar vlllwkcvfp vspevlesek
      601 srgdsftwqv tlegragalc aiksfvahcg dllteeviqh lvpplpcavd lltqlssilk
      661 tygsplktps vvyrqrlyel lillspetye gnlsailkel aadltapdiq vgastfllpp
      721 lchqddllil spllqetdhr fieeqlllgs giacgsleyd pysiyekdve gdsvpkplpp
      781 tlsvtssavk lfgvvcahvg eaqrllvleq lldsikhtkg arqqvvqlhv vsavssflky
      841 vagskghlgp eevrrpvlal vmgalespnp llrcaaaeaw arlaqvvddg vftaalaqvs
      901 fdklksarda vtrtghslal gslhrylggi ssqhlnscvg ilytlsqdst spdvqtwalh
      961 slsliidssg plyhthaept lsliimllln vppthaevhq slgcclnali ttlgpelqgn
     1021 stsvstlrss cllgcavmqd npdclvqaqa isclqqlhmf aprhvnlssl vsclcvnlcs
     1081 pylllrravl aclrqlvqre aaevsehavm laknsgeelt ldanirevgl egalltlldk
     1141 etdrklchdi ketlnhmlts mavdklsfwl klckdvlaas adfaavtcvd tmqeeegdrg
     1201 ddasvltsrs dgrphpftnp rwatrvfaae cvcriitqce nahsahfdva laqdlkkkds
     1261 rsdflvlhla dlirmafmaa tdhsdqlrls gletllvvir rfaaipepef pghvileqyq
     1321 anvgaalrpa ftsetppdvt akacqvcsaw iasgvvsdln dirrvhqllv asltkiqvgk
     1381 ealshlynes astmeilavl kawaevyiia verhknhrqp lktppacsee svgngsispd
     1441 glldlvhadl gtlsrlwlaa lqdfalltlp sefasqlpve ggafytaets enaklhyyns
     1501 walilhatal wltgtgfvva dpdegapnls rpvtptsmcq gsssgptvks pedvyterfh
     1561 lilgisvkfl cslrsdatme sitaclhalq alldvpwprs kigsdqdlgi ellnvlhrvi
     1621 ltrespsiql aslevvrqii caaqehvkek rrsaevddga aeketlpefg egkdtgglvp
     1681 gkslvfatle lcvcilvrql pglnpkltgs pgvkaakpqm lsedgsrlvs aalvilselp
     1741 avcspegsis ilptilylti gvlretavkl pggqlsstva aslqalkgil aspmaraeks
     1801 htawtdllrs alttildcwd pvdgthqeld evslltaitv filstspevt tipclqkrci
     1861 ekfkatleik dpmvqiktyq lllsifqypn pavsypyiys lvssiveklq eidrrkpeet
     1921 telqifqegi kvlealvava eeqhrsqlva cllpilisfl ldenalgsat simrnlhdfa
     1981 lqnlmqigpq yssvfksvma sspalkarle aaikgnqetv kvktptskht dnsgksssiq
     2041 lktnfl
//
LOCUS       XP_061015046            2046 aa            linear   MAM 02-DEC-2023
DEFINITION  HEAT repeat-containing protein 5A isoform X1 [Dama dama].
ACCESSION   XP_061015046
VERSION     XP_061015046.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159063.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2046
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2046
                     /product="HEAT repeat-containing protein 5A isoform X1"
                     /calculated_mol_wt=221402
     Region          97..121
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            order(113..114,117,120..121,154..155,158,161..162,165,
                     195..196,199,202..203,206,236..237,240,243..244)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          137..165
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          177..207
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          218..244
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          1264..1466
                     /region_name="Laa1_Sip1_HTR5"
                     /note="Laa1/Sip1/HEATR5 HEAT repeat region; pfam20210"
                     /db_xref="CDD:466361"
     CDS             1..2046
                     /gene="HEATR5A"
                     /coded_by="XM_061159063.1:147..6287"
                     /db_xref="GeneID:133067967"
ORIGIN      
        1 melahsllln eeaynqlgev qkaefifdwl rylekllvat srsdvrekqk tlveqllsll
       61 nsspgpptrk llaknlally sigdtfsvye tidkcndlir skddspsylp tklaavvclg
      121 slykklgril gntftdtvgn ilkamksaes qgryeimlsl qnilnglgaa atpchrdvyk
      181 aarscltdrs mavrcaaakc llelqneavf mwstdldsva tlcfksfegs nydvrisvsk
      241 llgtvlakai iskhpgaaas rqstrrvsle evlellgtgf lrgssgflra sgdmlkgtss
      301 vsrdvrvgvt qayvvfistl ggtwleknfa aflshilslv sqshpkatqt qidavcsrrc
      361 vsfilratvg gllgekaqia aakdicqaiw klkkvmdavm sdgnletrlg sadvaasqhm
      421 lvcalqelgn lihslgttaa pllqdssagi ldnvisvtlh psvsvrlaaa wclhciaval
      481 psyltplldr clerltvlks speavtgfsf avaallgavk hcplgiphgk gkiimalaed
      541 llcsaaqnsr lsaqrtqagw lliaalmtlg pafvghhlar vlllwkcvfp vspevlesek
      601 srgdsftwqv tlegragalc aiksfvahcg dllteeviqh lvpplpcavd lltqlssilk
      661 tygsplktps vvyrqrlyel lillspetye gnlsailkel aadltapdiq vgastfllpp
      721 lchqddllil spllqetdhr fieeqlllgs giacgsleyd pysiyekdve gdsvpkplpp
      781 tlsvtssavk lfgvvcahvg eaqrllvleq lldsikhtkg arqqvvqlhv vsavssflky
      841 vagskghlgp eevrrpvlal vmgalespnp llrcaaaeaw arlaqvvddg vftaalaqvs
      901 fdklksarda vtrtghslal gslhrylggi ssqhlnscvg ilytlsqdst spdvqtwalh
      961 slsliidssg plyhthaept lsliimllln vppthaevhq slgcclnali ttlgpelqgn
     1021 stsvstlrss cllgcavmqd npdclvqaqa isclqqlhmf aprhvnlssl vsclcvnlcs
     1081 pylllrravl aclrqlvqre aaevsehavm laknsgeelt ldanirevgl egalltlldk
     1141 etdrklchdi ketlnhmlts mavdklsfwl klckdvlaas adfaavtcvd tmqeeegdrg
     1201 ddasvltsrs dgrphpftnp rwatrvfaae cvcriitqce nahsahfdva laqdlkkkds
     1261 rsdflvlhla dlirmafmaa tdhsdqlrls gletllvvir rfaaipepef pghvileqyq
     1321 anvgaalrpa ftsetppdvt akacqvcsaw iasgvvsdln dirrvhqllv asltkiqvgk
     1381 ealshlynes astmeilavl kawaevyiia verhknhrqp lktppacsee svgngsispd
     1441 glldlvhadl gtlsrlwlaa lqdfalltlp sefasqlpve ggafytaets enaklhyyns
     1501 walilhatal wltgtgfvva dpdegapnls rpvtptsmcq gsssgptvks pedvyterfh
     1561 lilgisvkfl cslrsdatme sitaclhalq alldvpwprs kigsdqdlgi ellnvlhrvi
     1621 ltrespsiql aslevvrqii caaqehvkek rrsaevddga aeketlpefg egkdtgglvp
     1681 gkslvfatle lcvcilvrql pglnpkltgs pgvkaakpqm lsedgsrlvs aalvilselp
     1741 avcspegsis ilptilylti gvlretavkl pggqlsstva aslqalkgil aspmaraeks
     1801 htawtdllrs alttildcwd pvdgthqeld evslltaitv filstspevt tipclqkrci
     1861 ekfkatleik dpmvqiktyq lllsifqypn pavsypyiys lvssiveklq eidrrkpeet
     1921 telqifqegi kvlealvava eeqhrsqlva cllpilisfl ldenalgsat simrnlhdfa
     1981 lqnlmqigpq yssvfksvma sspalkarle aaikgnqetv kvktptskht dnsgksssiq
     2041 lktnfl
//
LOCUS       XP_061015047            2046 aa            linear   MAM 02-DEC-2023
DEFINITION  HEAT repeat-containing protein 5A isoform X1 [Dama dama].
ACCESSION   XP_061015047
VERSION     XP_061015047.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159064.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2046
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2046
                     /product="HEAT repeat-containing protein 5A isoform X1"
                     /calculated_mol_wt=221402
     Region          97..121
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            order(113..114,117,120..121,154..155,158,161..162,165,
                     195..196,199,202..203,206,236..237,240,243..244)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          137..165
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          177..207
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          218..244
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          1264..1466
                     /region_name="Laa1_Sip1_HTR5"
                     /note="Laa1/Sip1/HEATR5 HEAT repeat region; pfam20210"
                     /db_xref="CDD:466361"
     CDS             1..2046
                     /gene="HEATR5A"
                     /coded_by="XM_061159064.1:146..6286"
                     /db_xref="GeneID:133067967"
ORIGIN      
        1 melahsllln eeaynqlgev qkaefifdwl rylekllvat srsdvrekqk tlveqllsll
       61 nsspgpptrk llaknlally sigdtfsvye tidkcndlir skddspsylp tklaavvclg
      121 slykklgril gntftdtvgn ilkamksaes qgryeimlsl qnilnglgaa atpchrdvyk
      181 aarscltdrs mavrcaaakc llelqneavf mwstdldsva tlcfksfegs nydvrisvsk
      241 llgtvlakai iskhpgaaas rqstrrvsle evlellgtgf lrgssgflra sgdmlkgtss
      301 vsrdvrvgvt qayvvfistl ggtwleknfa aflshilslv sqshpkatqt qidavcsrrc
      361 vsfilratvg gllgekaqia aakdicqaiw klkkvmdavm sdgnletrlg sadvaasqhm
      421 lvcalqelgn lihslgttaa pllqdssagi ldnvisvtlh psvsvrlaaa wclhciaval
      481 psyltplldr clerltvlks speavtgfsf avaallgavk hcplgiphgk gkiimalaed
      541 llcsaaqnsr lsaqrtqagw lliaalmtlg pafvghhlar vlllwkcvfp vspevlesek
      601 srgdsftwqv tlegragalc aiksfvahcg dllteeviqh lvpplpcavd lltqlssilk
      661 tygsplktps vvyrqrlyel lillspetye gnlsailkel aadltapdiq vgastfllpp
      721 lchqddllil spllqetdhr fieeqlllgs giacgsleyd pysiyekdve gdsvpkplpp
      781 tlsvtssavk lfgvvcahvg eaqrllvleq lldsikhtkg arqqvvqlhv vsavssflky
      841 vagskghlgp eevrrpvlal vmgalespnp llrcaaaeaw arlaqvvddg vftaalaqvs
      901 fdklksarda vtrtghslal gslhrylggi ssqhlnscvg ilytlsqdst spdvqtwalh
      961 slsliidssg plyhthaept lsliimllln vppthaevhq slgcclnali ttlgpelqgn
     1021 stsvstlrss cllgcavmqd npdclvqaqa isclqqlhmf aprhvnlssl vsclcvnlcs
     1081 pylllrravl aclrqlvqre aaevsehavm laknsgeelt ldanirevgl egalltlldk
     1141 etdrklchdi ketlnhmlts mavdklsfwl klckdvlaas adfaavtcvd tmqeeegdrg
     1201 ddasvltsrs dgrphpftnp rwatrvfaae cvcriitqce nahsahfdva laqdlkkkds
     1261 rsdflvlhla dlirmafmaa tdhsdqlrls gletllvvir rfaaipepef pghvileqyq
     1321 anvgaalrpa ftsetppdvt akacqvcsaw iasgvvsdln dirrvhqllv asltkiqvgk
     1381 ealshlynes astmeilavl kawaevyiia verhknhrqp lktppacsee svgngsispd
     1441 glldlvhadl gtlsrlwlaa lqdfalltlp sefasqlpve ggafytaets enaklhyyns
     1501 walilhatal wltgtgfvva dpdegapnls rpvtptsmcq gsssgptvks pedvyterfh
     1561 lilgisvkfl cslrsdatme sitaclhalq alldvpwprs kigsdqdlgi ellnvlhrvi
     1621 ltrespsiql aslevvrqii caaqehvkek rrsaevddga aeketlpefg egkdtgglvp
     1681 gkslvfatle lcvcilvrql pglnpkltgs pgvkaakpqm lsedgsrlvs aalvilselp
     1741 avcspegsis ilptilylti gvlretavkl pggqlsstva aslqalkgil aspmaraeks
     1801 htawtdllrs alttildcwd pvdgthqeld evslltaitv filstspevt tipclqkrci
     1861 ekfkatleik dpmvqiktyq lllsifqypn pavsypyiys lvssiveklq eidrrkpeet
     1921 telqifqegi kvlealvava eeqhrsqlva cllpilisfl ldenalgsat simrnlhdfa
     1981 lqnlmqigpq yssvfksvma sspalkarle aaikgnqetv kvktptskht dnsgksssiq
     2041 lktnfl
//
LOCUS       XP_061015048            2045 aa            linear   MAM 02-DEC-2023
DEFINITION  HEAT repeat-containing protein 5A isoform X2 [Dama dama].
ACCESSION   XP_061015048
VERSION     XP_061015048.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159065.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2045
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2045
                     /product="HEAT repeat-containing protein 5A isoform X2"
                     /calculated_mol_wt=221303
     Region          97..121
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            order(113..114,117,120..121,154..155,158,161..162,165,
                     195..196,199,202..203,206,236..237,240,243..244)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          137..165
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          177..207
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          218..244
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          1264..1466
                     /region_name="Laa1_Sip1_HTR5"
                     /note="Laa1/Sip1/HEATR5 HEAT repeat region; pfam20210"
                     /db_xref="CDD:466361"
     CDS             1..2045
                     /gene="HEATR5A"
                     /coded_by="XM_061159065.1:369..6506"
                     /db_xref="GeneID:133067967"
ORIGIN      
        1 melahsllln eeaynqlgev qkaefifdwl rylekllvat srsdvrekqk tlveqllsll
       61 nsspgpptrk llaknlally sigdtfsvye tidkcndlir skddspsylp tklaavvclg
      121 slykklgril gntftdtvgn ilkamksaes qgryeimlsl qnilnglgaa atpchrdvyk
      181 aarscltdrs mavrcaaakc llelqneavf mwstdldsva tlcfksfegs nydvrisvsk
      241 llgtvlakai iskhpgaaas rqstrrvsle evlellgtgf lrgssgflra sgdmlkgtss
      301 vsrdvrvgvt qayvvfistl ggtwleknfa aflshilslv sqshpkatqt qidavcsrrc
      361 vsfilratvg gllgekaqia aakdicqaiw klkkvmdavm sdgnletrlg sadvaasqhm
      421 lvcalqelgn lihslgttaa pllqdssagi ldnvisvtlh psvsvrlaaa wclhciaval
      481 psyltplldr clerltvlks speavtgfsf avaallgavk hcplgiphgk gkiimalaed
      541 llcsaaqnsr lsaqrtqagw lliaalmtlg pafvghhlar vlllwkcvfp vspevlesek
      601 srgdsftwqv tlegragalc aiksfvahcg dllteeviqh lvpplpcavd lltqlssilk
      661 tygsplktps vvyrqrlyel lillspetye gnlsailkel aadltapdiq vgastfllpp
      721 lchqddllil spllqetdhr fieeqlllgs giacgsleyd pysiyekdve gdsvpkplpp
      781 tlsvtssavk lfgvvcahvg eaqrllvleq lldsikhtkg arqqvvqlhv vsavssflky
      841 vagskghlgp eevrrpvlal vmgalespnp llrcaaaeaw arlaqvvddg vftaalaqvs
      901 fdklksarda vtrtghslal gslhrylggi ssqhlnscvg ilytlsqdst spdvqtwalh
      961 slsliidssg plyhthaept lsliimllln vppthaevhq slgcclnali ttlgpelqgn
     1021 stsvstlrss cllgcavmqd npdclvqaqa isclqqlhmf aprhvnlssl vsclcvnlcs
     1081 pylllrravl aclrqlvqre aaevsehavm laknsgeelt ldanirevgl egalltlldk
     1141 etdrklchdi ketlnhmlts mavdklsfwl klckdvlaas adfaavtcvd tmqeeegdrg
     1201 ddasvltsrs dgrphpftnp rwatrvfaae cvcriitqce nahsahfdva laqdlkkkds
     1261 rsdflvlhla dlirmafmaa tdhsdqlrls gletllvvir rfaaipepef pghvileqyq
     1321 anvgaalrpa ftsetppdvt akacqvcsaw iasgvvsdln dirrvhqllv asltkiqvgk
     1381 ealshlynes astmeilavl kawaevyiia verhknhrqp lktppacsee svgngsispd
     1441 glldlvhadl gtlsrlwlaa lqdfalltlp sefasqlpve ggafytaets enaklhyyns
     1501 walilhatal wltgtgfvva dpdegapnls rpvtptsmcq gsssgptvks pedvyterfh
     1561 lilgisvkfl cslrsdatme sitaclhalq alldvpwprs kigsdqdlgi ellnvlhrvi
     1621 ltrespsiql aslevvrqii caaqehvkek rrsaevddga aeketlpefg egkdtgglvp
     1681 gkslvfatle lcvcilvrql pglnpkltgs pgvkaakpqm lsedgsrlvs aalvilselp
     1741 avcspegsis ilptilylti gvlretavkl pggqlsstva aslqalkgil aspmaraeks
     1801 htawtdllrs alttildcwd pdgthqelde vslltaitvf ilstspevtt ipclqkrcie
     1861 kfkatleikd pmvqiktyql llsifqypnp avsypyiysl vssiveklqe idrrkpeett
     1921 elqifqegik vlealvavae eqhrsqlvac llpilisfll denalgsats imrnlhdfal
     1981 qnlmqigpqy ssvfksvmas spalkarlea aikgnqetvk vktptskhtd nsgksssiql
     2041 ktnfl
//
LOCUS       XP_061015049            2045 aa            linear   MAM 02-DEC-2023
DEFINITION  HEAT repeat-containing protein 5A isoform X3 [Dama dama].
ACCESSION   XP_061015049
VERSION     XP_061015049.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159066.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2045
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2045
                     /product="HEAT repeat-containing protein 5A isoform X3"
                     /calculated_mol_wt=221331
     Region          97..121
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            order(113..114,117,120..121,154..155,158,161..162,165,
                     195..196,199,202..203,206,236..237,240,243..244)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          137..165
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          177..207
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          218..244
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          1263..1465
                     /region_name="Laa1_Sip1_HTR5"
                     /note="Laa1/Sip1/HEATR5 HEAT repeat region; pfam20210"
                     /db_xref="CDD:466361"
     CDS             1..2045
                     /gene="HEATR5A"
                     /coded_by="XM_061159066.1:370..6507"
                     /db_xref="GeneID:133067967"
ORIGIN      
        1 melahsllln eeaynqlgev qkaefifdwl rylekllvat srsdvrekqk tlveqllsll
       61 nsspgpptrk llaknlally sigdtfsvye tidkcndlir skddspsylp tklaavvclg
      121 slykklgril gntftdtvgn ilkamksaes qgryeimlsl qnilnglgaa atpchrdvyk
      181 aarscltdrs mavrcaaakc llelqneavf mwstdldsva tlcfksfegs nydvrisvsk
      241 llgtvlakai iskhpgaasr qstrrvslee vlellgtgfl rgssgflras gdmlkgtssv
      301 srdvrvgvtq ayvvfistlg gtwleknfaa flshilslvs qshpkatqtq idavcsrrcv
      361 sfilratvgg llgekaqiaa akdicqaiwk lkkvmdavms dgnletrlgs advaasqhml
      421 vcalqelgnl ihslgttaap llqdssagil dnvisvtlhp svsvrlaaaw clhciavalp
      481 syltplldrc lerltvlkss peavtgfsfa vaallgavkh cplgiphgkg kiimalaedl
      541 lcsaaqnsrl saqrtqagwl liaalmtlgp afvghhlarv lllwkcvfpv spevleseks
      601 rgdsftwqvt legragalca iksfvahcgd llteeviqhl vpplpcavdl ltqlssilkt
      661 ygsplktpsv vyrqrlyell illspetyeg nlsailkela adltapdiqv gastfllppl
      721 chqddllils pllqetdhrf ieeqlllgsg iacgsleydp ysiyekdveg dsvpkplppt
      781 lsvtssavkl fgvvcahvge aqrllvleql ldsikhtkga rqqvvqlhvv savssflkyv
      841 agskghlgpe evrrpvlalv mgalespnpl lrcaaaeawa rlaqvvddgv ftaalaqvsf
      901 dklksardav trtghslalg slhrylggis sqhlnscvgi lytlsqdsts pdvqtwalhs
      961 lsliidssgp lyhthaeptl sliimlllnv ppthaevhqs lgcclnalit tlgpelqgns
     1021 tsvstlrssc llgcavmqdn pdclvqaqai sclqqlhmfa prhvnlsslv sclcvnlcsp
     1081 ylllrravla clrqlvqrea aevsehavml aknsgeeltl danirevgle galltlldke
     1141 tdrklchdik etlnhmltsm avdklsfwlk lckdvlaasa dfaavtcvdt mqeeegdrgd
     1201 dasvltsrsd grphpftnpr watrvfaaec vcriitqcen ahsahfdval aqdlkkkdsr
     1261 sdflvlhlad lirmafmaat dhsdqlrlsg letllvvirr faaipepefp ghvileqyqa
     1321 nvgaalrpaf tsetppdvta kacqvcsawi asgvvsdlnd irrvhqllva sltkiqvgke
     1381 alshlynesa stmeilavlk awaevyiiav erhknhrqpl ktppacsees vgngsispdg
     1441 lldlvhadlg tlsrlwlaal qdfalltlps efasqlpveg gafytaetse naklhyynsw
     1501 alilhatalw ltgtgfvvad pdegapnlsr pvtptsmcqg sssgptvksp edvyterfhl
     1561 ilgisvkflc slrsdatmes itaclhalqa lldvpwprsk igsdqdlgie llnvlhrvil
     1621 trespsiqla slevvrqiic aaqehvkekr rsaevddgaa eketlpefge gkdtgglvpg
     1681 kslvfatlel cvcilvrqlp glnpkltgsp gvkaakpqml sedgsrlvsa alvilselpa
     1741 vcspegsisi lptilyltig vlretavklp ggqlsstvaa slqalkgila spmaraeksh
     1801 tawtdllrsa lttildcwdp vdgthqelde vslltaitvf ilstspevtt ipclqkrcie
     1861 kfkatleikd pmvqiktyql llsifqypnp avsypyiysl vssiveklqe idrrkpeett
     1921 elqifqegik vlealvavae eqhrsqlvac llpilisfll denalgsats imrnlhdfal
     1981 qnlmqigpqy ssvfksvmas spalkarlea aikgnqetvk vktptskhtd nsgksssiql
     2041 ktnfl
//
LOCUS       XP_061015050            2011 aa            linear   MAM 02-DEC-2023
DEFINITION  HEAT repeat-containing protein 5A isoform X4 [Dama dama].
ACCESSION   XP_061015050
VERSION     XP_061015050.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159067.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2011
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2011
                     /product="HEAT repeat-containing protein 5A isoform X4"
                     /calculated_mol_wt=217431
     Region          97..121
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            order(113..114,117,120..121,154..155,158,161..162,165,
                     195..196,199,202..203,206,236..237,240,243..244)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          137..165
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          177..207
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          218..244
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          1229..1431
                     /region_name="Laa1_Sip1_HTR5"
                     /note="Laa1/Sip1/HEATR5 HEAT repeat region; pfam20210"
                     /db_xref="CDD:466361"
     CDS             1..2011
                     /gene="HEATR5A"
                     /coded_by="XM_061159067.1:370..6405"
                     /db_xref="GeneID:133067967"
ORIGIN      
        1 melahsllln eeaynqlgev qkaefifdwl rylekllvat srsdvrekqk tlveqllsll
       61 nsspgpptrk llaknlally sigdtfsvye tidkcndlir skddspsylp tklaavvclg
      121 slykklgril gntftdtvgn ilkamksaes qgryeimlsl qnilnglgaa atpchrdvyk
      181 aarscltdrs mavrcaaakc llelqneavf mwstdldsva tlcfksfegs nydvrisvsk
      241 llgtvlakai iskhpgaaas rqstrrvsle evlellgtgf lrgssgflra sgdmlkgtss
      301 vsrdvrvgvt qayvvfistl ggtwleknfa aflshilslv sqshpkatqt qidavcsrrc
      361 vsfilratvg gllgekaqia aakdicqaiw klkkvmdavm sdgnletrlg sadvaasqhm
      421 lvcalqelgn lihslgttaa pllqdssagi ldnvisvtlh psvsvrlaaa wclhciaval
      481 psyltplldr clerltvlks speavtgfsf avaallgavk hcplgiphgk gkiimalaed
      541 llcsaaqnsr lsaqrtqagw lliaalmtlg pafvghhlar vlllwkcvfp vspevlesek
      601 srgdsftwqv tlegragalc aiksfvahcg dllteeviqh lvpplpcavd lltqlssilk
      661 tygsplktps vvyrqrlyel lillspetye gnlsailkel aadltapdiq lllgsgiacg
      721 sleydpysiy ekdvegdsvp kplpptlsvt ssavklfgvv cahvgeaqrl lvleqlldsi
      781 khtkgarqqv vqlhvvsavs sflkyvagsk ghlgpeevrr pvlalvmgal espnpllrca
      841 aaeawarlaq vvddgvftaa laqvsfdklk sardavtrtg hslalgslhr ylggissqhl
      901 nscvgilytl sqdstspdvq twalhslsli idssgplyht haeptlslii mlllnvppth
      961 aevhqslgcc lnalittlgp elqgnstsvs tlrsscllgc avmqdnpdcl vqaqaisclq
     1021 qlhmfaprhv nlsslvsclc vnlcspylll rravlaclrq lvqreaaevs ehavmlakns
     1081 geeltldani revglegall tlldketdrk lchdiketln hmltsmavdk lsfwlklckd
     1141 vlaasadfaa vtcvdtmqee egdrgddasv ltsrsdgrph pftnprwatr vfaaecvcri
     1201 itqcenahsa hfdvalaqdl kkkdsrsdfl vlhladlirm afmaatdhsd qlrlsgletl
     1261 lvvirrfaai pepefpghvi leqyqanvga alrpaftset ppdvtakacq vcsawiasgv
     1321 vsdlndirrv hqllvasltk iqvgkealsh lynesastme ilavlkawae vyiiaverhk
     1381 nhrqplktpp acseesvgng sispdglldl vhadlgtlsr lwlaalqdfa lltlpsefas
     1441 qlpveggafy taetsenakl hyynswalil hatalwltgt gfvvadpdeg apnlsrpvtp
     1501 tsmcqgsssg ptvkspedvy terfhlilgi svkflcslrs datmesitac lhalqalldv
     1561 pwprskigsd qdlgiellnv lhrviltres psiqlaslev vrqiicaaqe hvkekrrsae
     1621 vddgaaeket lpefgegkdt gglvpgkslv fatlelcvci lvrqlpglnp kltgspgvka
     1681 akpqmlsedg srlvsaalvi lselpavcsp egsisilpti lyltigvlre tavklpggql
     1741 sstvaaslqa lkgilaspma raekshtawt dllrsaltti ldcwdpvdgt hqeldevsll
     1801 taitvfilst spevttipcl qkrciekfka tleikdpmvq iktyqlllsi fqypnpavsy
     1861 pyiyslvssi veklqeidrr kpeettelqi fqegikvlea lvavaeeqhr sqlvacllpi
     1921 lisflldena lgsatsimrn lhdfalqnlm qigpqyssvf ksvmasspal karleaaikg
     1981 nqetvkvktp tskhtdnsgk sssiqlktnf l
//
LOCUS       XP_061015051             797 aa            linear   MAM 02-DEC-2023
DEFINITION  striatin-3 isoform X1 [Dama dama].
ACCESSION   XP_061015051
VERSION     XP_061015051.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159068.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..797
                     /product="striatin-3 isoform X1"
                     /calculated_mol_wt=87154
     Region          65..190
                     /region_name="Striatin"
                     /note="Striatin family; pfam08232"
                     /db_xref="CDD:462401"
     Region          475..796
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(479,497,501,507..508,531..532,550,554,560..561,
                     584..585,602,607,613..614,629,649,654,659..660,677..678,
                     698,702,708..709,721..722,739,744,750..751,763..764,786,
                     790,796)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          485..531
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          537..575
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          589..626
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          635..671
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          684..720
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          726..765
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          772..796
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..797
                     /gene="STRN3"
                     /coded_by="XM_061159068.1:255..2648"
                     /db_xref="GeneID:133067968"
ORIGIN      
        1 mdelaggggg gpamaapprq qqgpggnmsl spggngaagg ggspaaegaa paagpelsrp
       61 qqytipgilh yiqhewarfe merahwever aelqariafl qgerkgqenl kkdlvrrikm
      121 leyalkqera kyhklkygte lnqgdlkmpt feseetkdte aptapqnsql twkqgrqllr
      181 qylqevgytd tildvrsqrv rsllglsnse pngsvetknl eqilnggesp kqkgqeikrt
      241 sgdvletfnf lenaddsdee eendmiegip egkdkhrink hkigneglaa dltddpdtee
      301 alkefdflvt aedgegagea rssgdgtewd kddlspttev wdvdqglisk lkeqykkerk
      361 gkkgvkrvnr tklydtiadl gddelplfps giinqsrsas trmtdhegar aeeaepitfp
      421 sgggksfimg sddvllsvlg lgdladltvt ndadysydlp ankdafrktw npkytlrshf
      481 dgvralafhp vepvlvtase dhtlklwnlq ktvpakksas ldvepiytfr ahigpvlsla
      541 isssgeqcfs ggtdaaiqww nvpspnvdpy dtyepnvlag tlvahtdavw glaysgiknq
      601 llscsadgtv rlwspqeklp cictyngdke hgiptsvdfi gcdpahmvts fntgstviyd
      661 letsqslvml ssqmdsglqs snhinrvvsh ptlpvtitah edrhikffdn ktgkmihsmv
      721 ahldavtsla vdpngiylms gshdcsirlw nldsktcvqe itahrkklde siydvafhps
      781 kayiasagad alakvfv
//
LOCUS       XP_061015052             760 aa            linear   MAM 02-DEC-2023
DEFINITION  striatin-3 isoform X2 [Dama dama].
ACCESSION   XP_061015052
VERSION     XP_061015052.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159069.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..760
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..760
                     /product="striatin-3 isoform X2"
                     /calculated_mol_wt=82782
     Region          65..190
                     /region_name="Striatin"
                     /note="Striatin family; pfam08232"
                     /db_xref="CDD:462401"
     Region          438..759
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(442,460,464,470..471,494..495,513,517,523..524,
                     547..548,565,570,576..577,592,612,617,622..623,640..641,
                     661,665,671..672,684..685,702,707,713..714,726..727,749,
                     753,759)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          448..494
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          500..538
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          552..589
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          598..634
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          647..683
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          689..728
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          735..759
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..760
                     /gene="STRN3"
                     /coded_by="XM_061159069.1:253..2535"
                     /db_xref="GeneID:133067968"
ORIGIN      
        1 mdelaggggg gpamaapprq qqgpggnmsl spggngaagg ggspaaegaa paagpelsrp
       61 qqytipgilh yiqhewarfe merahwever aelqariafl qgerkgqenl kkdlvrrikm
      121 leyalkqera kyhklkygte lnqgdlkmpt feseetkdte aptapqnsql twkqgrqllr
      181 qylqevgytd tildvrsqrv rsllglsnse pngsvetknl eqilnggesp kqkgqeikrt
      241 sgdvletfnf lenaddsdee eendmiegip egkdkhrink hkigneglaa dltddpdtee
      301 alkefdflvt aedgegagea rssgdgtewg vnrtklydti adlgddelpl fpsgiinqsr
      361 sastrmtdhe garaeeaepi tfpsgggksf imgsddvlls vlglgdladl tvtndadysy
      421 dlpankdafr ktwnpkytlr shfdgvrala fhpvepvlvt asedhtlklw nlqktvpakk
      481 sasldvepiy tfrahigpvl slaisssgeq cfsggtdaai qwwnvpspnv dpydtyepnv
      541 lagtlvahtd avwglaysgi knqllscsad gtvrlwspqe klpcictyng dkehgiptsv
      601 dfigcdpahm vtsfntgstv iydletsqsl vmlssqmdsg lqssnhinrv vshptlpvti
      661 tahedrhikf fdnktgkmih smvahldavt slavdpngiy lmsgshdcsi rlwnldsktc
      721 vqeitahrkk ldesiydvaf hpskayiasa gadalakvfv
//
LOCUS       XP_061015053             750 aa            linear   MAM 02-DEC-2023
DEFINITION  striatin-3 isoform X3 [Dama dama].
ACCESSION   XP_061015053
VERSION     XP_061015053.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159070.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..750
                     /product="striatin-3 isoform X3"
                     /calculated_mol_wt=81954
     Region          65..190
                     /region_name="Striatin"
                     /note="Striatin family; pfam08232"
                     /db_xref="CDD:462401"
     Region          428..749
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(432,450,454,460..461,484..485,503,507,513..514,
                     537..538,555,560,566..567,582,602,607,612..613,630..631,
                     651,655,661..662,674..675,692,697,703..704,716..717,739,
                     743,749)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          438..484
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          490..528
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          542..579
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          588..624
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          637..673
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          679..718
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          725..749
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..750
                     /gene="STRN3"
                     /coded_by="XM_061159070.1:252..2504"
                     /db_xref="GeneID:133067968"
ORIGIN      
        1 mdelaggggg gpamaapprq qqgpggnmsl spggngaagg ggspaaegaa paagpelsrp
       61 qqytipgilh yiqhewarfe merahwever aelqariafl qgerkgqenl kkdlvrrikm
      121 leyalkqera kyhklkygte lnqgdlkmpt feseetkdte aptapqnsql twkqgrqllr
      181 qylqevgytd tildvrsqrv rsllglsnse pngsvetknl eqilnggesp kqkgqeikrt
      241 sgdvletfnf lenaddsdee eendmiegip egkdkhrink hkigneglaa dltddpdtee
      301 alkefdflvt aedgegagea rssgdgtewd kddlspttev wdvdqglisk lkeqykkerk
      361 gkkgvktepi tfpsgggksf imgsddvlls vlglgdladl tvtndadysy dlpankdafr
      421 ktwnpkytlr shfdgvrala fhpvepvlvt asedhtlklw nlqktvpakk sasldvepiy
      481 tfrahigpvl slaisssgeq cfsggtdaai qwwnvpspnv dpydtyepnv lagtlvahtd
      541 avwglaysgi knqllscsad gtvrlwspqe klpcictyng dkehgiptsv dfigcdpahm
      601 vtsfntgstv iydletsqsl vmlssqmdsg lqssnhinrv vshptlpvti tahedrhikf
      661 fdnktgkmih smvahldavt slavdpngiy lmsgshdcsi rlwnldsktc vqeitahrkk
      721 ldesiydvaf hpskayiasa gadalakvfv
//
LOCUS       XP_061015054             713 aa            linear   MAM 02-DEC-2023
DEFINITION  striatin-3 isoform X4 [Dama dama].
ACCESSION   XP_061015054
VERSION     XP_061015054.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159071.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..713
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..713
                     /product="striatin-3 isoform X4"
                     /calculated_mol_wt=77651
     Region          65..190
                     /region_name="Striatin"
                     /note="Striatin family; pfam08232"
                     /db_xref="CDD:462401"
     Region          391..712
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(395,413,417,423..424,447..448,466,470,476..477,
                     500..501,518,523,529..530,545,565,570,575..576,593..594,
                     614,618,624..625,637..638,655,660,666..667,679..680,702,
                     706,712)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          401..447
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          453..491
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          505..542
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          551..587
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          600..636
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          642..681
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          688..712
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..713
                     /gene="STRN3"
                     /coded_by="XM_061159071.1:246..2387"
                     /db_xref="GeneID:133067968"
ORIGIN      
        1 mdelaggggg gpamaapprq qqgpggnmsl spggngaagg ggspaaegaa paagpelsrp
       61 qqytipgilh yiqhewarfe merahwever aelqariafl qgerkgqenl kkdlvrrikm
      121 leyalkqera kyhklkygte lnqgdlkmpt feseetkdte aptapqnsql twkqgrqllr
      181 qylqevgytd tildvrsqrv rsllglsnse pngsvetknl eqilnggesp kqkgqeikrt
      241 sgdvletfnf lenaddsdee eendmiegip egkdkhrink hkigneglaa dltddpdtee
      301 alkefdflvt aedgegagea rssgdgtewa epitfpsggg ksfimgsddv llsvlglgdl
      361 adltvtndad ysydlpankd afrktwnpky tlrshfdgvr alafhpvepv lvtasedhtl
      421 klwnlqktvp akksasldve piytfrahig pvlslaisss geqcfsggtd aaiqwwnvps
      481 pnvdpydtye pnvlagtlva htdavwglay sgiknqllsc sadgtvrlws pqeklpcict
      541 yngdkehgip tsvdfigcdp ahmvtsfntg stviydlets qslvmlssqm dsglqssnhi
      601 nrvvshptlp vtitahedrh ikffdnktgk mihsmvahld avtslavdpn giylmsgshd
      661 csirlwnlds ktcvqeitah rkkldesiyd vafhpskayi asagadalak vfv
//
LOCUS       XP_061015055             704 aa            linear   MAM 02-DEC-2023
DEFINITION  striatin-3 isoform X5 [Dama dama].
ACCESSION   XP_061015055
VERSION     XP_061015055.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159072.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..704
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..704
                     /product="striatin-3 isoform X5"
                     /calculated_mol_wt=77744
     Region          <1..97
                     /region_name="Striatin"
                     /note="Striatin family; pfam08232"
                     /db_xref="CDD:462401"
     Region          382..703
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(386,404,408,414..415,438..439,457,461,467..468,
                     491..492,509,514,520..521,536,556,561,566..567,584..585,
                     605,609,615..616,628..629,646,651,657..658,670..671,693,
                     697,703)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          392..438
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          444..482
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          496..533
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          542..578
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          591..627
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          633..672
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          679..703
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..704
                     /gene="STRN3"
                     /coded_by="XM_061159072.1:355..2469"
                     /db_xref="GeneID:133067968"
ORIGIN      
        1 mariaflqge rkgqenlkkd lvrrikmley alkqerakyh klkygtelnq gdlkmptfes
       61 eetkdteapt apqnsqltwk qgrqllrqyl qevgytdtil dvrsqrvrsl lglsnsepng
      121 svetknleqi lnggespkqk gqeikrtsgd vletfnflen addsdeeeen dmiegipegk
      181 dkhrinkhki gneglaadlt ddpdteealk efdflvtaed gegagearss gdgtewdkdd
      241 lspttevwdv dqglisklke qykkerkgkk gvkrvnrtkl ydtiadlgdd elplfpsgii
      301 nqsrsastrm tdhegaraee aepitfpsgg gksfimgsdd vllsvlglgd ladltvtnda
      361 dysydlpank dafrktwnpk ytlrshfdgv ralafhpvep vlvtasedht lklwnlqktv
      421 pakksasldv epiytfrahi gpvlslaiss sgeqcfsggt daaiqwwnvp spnvdpydty
      481 epnvlagtlv ahtdavwgla ysgiknqlls csadgtvrlw spqeklpcic tyngdkehgi
      541 ptsvdfigcd pahmvtsfnt gstviydlet sqslvmlssq mdsglqssnh inrvvshptl
      601 pvtitahedr hikffdnktg kmihsmvahl davtslavdp ngiylmsgsh dcsirlwnld
      661 sktcvqeita hrkkldesiy dvafhpskay iasagadala kvfv
//
LOCUS       XP_061015056             678 aa            linear   MAM 02-DEC-2023
DEFINITION  striatin-3 isoform X6 [Dama dama].
ACCESSION   XP_061015056
VERSION     XP_061015056.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159073.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..678
                     /product="striatin-3 isoform X6"
                     /calculated_mol_wt=74664
     Region          <1..71
                     /region_name="Striatin"
                     /note="Striatin family; pfam08232"
                     /db_xref="CDD:462401"
     Region          356..677
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(360,378,382,388..389,412..413,431,435,441..442,
                     465..466,483,488,494..495,510,530,535,540..541,558..559,
                     579,583,589..590,602..603,620,625,631..632,644..645,667,
                     671,677)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          366..412
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          418..456
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          470..507
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          516..552
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          565..601
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          607..646
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          653..677
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..678
                     /gene="STRN3"
                     /coded_by="XM_061159073.1:99..2135"
                     /db_xref="GeneID:133067968"
ORIGIN      
        1 mleyalkqer akyhklkygt elnqgdlkmp tfeseetkdt eaptapqnsq ltwkqgrqll
       61 rqylqevgyt dtildvrsqr vrsllglsns epngsvetkn leqilngges pkqkgqeikr
      121 tsgdvletfn flenaddsde eeendmiegi pegkdkhrin khkignegla adltddpdte
      181 ealkefdflv taedgegage arssgdgtew dkddlsptte vwdvdqglis klkeqykker
      241 kgkkgvkrvn rtklydtiad lgddelplfp sgiinqsrsa strmtdhega raeeaepitf
      301 psgggksfim gsddvllsvl glgdladltv tndadysydl pankdafrkt wnpkytlrsh
      361 fdgvralafh pvepvlvtas edhtlklwnl qktvpakksa sldvepiytf rahigpvlsl
      421 aisssgeqcf sggtdaaiqw wnvpspnvdp ydtyepnvla gtlvahtdav wglaysgikn
      481 qllscsadgt vrlwspqekl pcictyngdk ehgiptsvdf igcdpahmvt sfntgstviy
      541 dletsqslvm lssqmdsglq ssnhinrvvs hptlpvtita hedrhikffd nktgkmihsm
      601 vahldavtsl avdpngiylm sgshdcsirl wnldsktcvq eitahrkkld esiydvafhp
      661 skayiasaga dalakvfv
//
LOCUS       XP_061015057             642 aa            linear   MAM 02-DEC-2023
DEFINITION  sec1 family domain-containing protein 1 [Dama dama].
ACCESSION   XP_061015057
VERSION     XP_061015057.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159074.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..642
                     /product="sec1 family domain-containing protein 1"
                     /calculated_mol_wt=72349
     Region          44..635
                     /region_name="Sec1"
                     /note="Sec1 family; pfam00995"
                     /db_xref="CDD:460020"
     CDS             1..642
                     /gene="SCFD1"
                     /coded_by="XM_061159074.1:61..1989"
                     /db_xref="GeneID:133067970"
ORIGIN      
        1 mvgakmaaaa aaasirerqt valkrmlnfn vphvknstge pvwkvliydr fgqdiispll
       61 svkelrdmgi tlhlllhsdr dpipdvpavy fvmpteenid rmcqdlrnql yesyylnfis
      121 aisrskledi anaalaasav tqvakvfdqy lnfitleddm fvlcnqnkel vsyrainrpd
      181 itdtemetvm dtivdslfcf fvtlgavpii rcsrgtaaem vavkldkklr enlrdarnsl
      241 ftgdtlgagq fsfqrpllvl idrnidlatp lhhtwtyqal vhdvldfhln rvnleessgt
      301 enspagarpk rknkksydlt pvdkfwqkhk gspfpevaes vqqelesyra qedevkrlks
      361 imglegedeg aismlsdnta kltsavsslp ellekkrlid lhtnvatavl ehikarkldv
      421 yfeyeekims kttldkslld iisdpdagtp edkmrlfliy yisaqqapse adleqykkal
      481 tdagcnlnpl qyikqwkafa kmasaptsyg ntttkpmgll srvmntgsqf vmegvknlvl
      541 kqqnlpvtri ldnlmemksn petddyryfd pkmlrgndss vprnknpfqe aivfvvgggn
      601 yieyqnlvdy ikgkqgkhil ygcselfnat qfikqlsqlg qk
//
LOCUS       XP_061015059             550 aa            linear   MAM 02-DEC-2023
DEFINITION  cochlin [Dama dama].
ACCESSION   XP_061015059
VERSION     XP_061015059.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159076.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..550
                     /product="cochlin"
                     /calculated_mol_wt=59577
     Region          30..112
                     /region_name="LCCL"
                     /note="LCCL domain; smart00603"
                     /db_xref="CDD:128866"
     Region          164..328
                     /region_name="vWA_collagen_alphaI-XII-like"
                     /note="Collagen: The extracellular matrix represents a
                     complex alloy of variable members of diverse protein
                     families defining structural integrity and various
                     physiological functions. The most abundant family is the
                     collagens with more than 20 different...; cd01482"
                     /db_xref="CDD:238759"
     Site            order(171,173,175,242,275)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238759"
     Site            order(173..175,177,242)
                     /site_type="active"
                     /note="integrin-collagen binding site [active]"
                     /db_xref="CDD:238759"
     Region          366..527
                     /region_name="vWA_collagen"
                     /note="von Willebrand factor (vWF) type A domain;
                     equivalent to the I-domain of integrins. This domain has a
                     variety of functions including: intermolecular adhesion,
                     cell migration, signalling, transcription, and DNA repair.
                     In integrins these domains form...; cd01472"
                     /db_xref="CDD:238749"
     Site            order(373,375,377,444,475)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238749"
     Site            order(375..377,379,444)
                     /site_type="active"
                     /note="integrin-collagen binding site [active]"
                     /db_xref="CDD:238749"
     Site            order(405,420..421,432..433,435..436)
                     /site_type="active"
                     /note="putative vWF-collagen binding site [active]"
                     /db_xref="CDD:238749"
     CDS             1..550
                     /gene="COCH"
                     /coded_by="XM_061159076.1:248..1900"
                     /db_xref="GeneID:133067972"
ORIGIN      
        1 mwaswipvlc lgvclllple pvgsegavpi aitcftrgld irkekadvlc pggcpleefs
       61 vfghivyasv ssicgaavhr gvignsggpv riyslpgren yssvvangiq sqtlsrwsas
      121 ftvtkgksgt qeatgqavst ahpatgkrlk ktpekktgnk dckadiafli dgsfnigqrr
      181 fnlqknfvgk valmlgigte gphvglvqas ehpkiefylk nftsakdvlf aikevgfrgg
      241 nsntgkalkh taqkfftadt gvrkgipkvv vvfidgwpsd dieeagivar efgvnvfivs
      301 vakpipeelg mvqdvafvdk avcrnngffs yhmpnwfgtt kyvkplvqkl ctheqmmcsk
      361 tcynsvniaf lidgsssvge snfrlmlefv sniaktfeis digakiaavq ftydqrtefs
      421 ftdystkenv lavirnirym sggtatgdai sftvrnvfgp mrdspnknfl vivtdgqsyd
      481 dvrgpaaaah dagitifsvg vawaplddlk dmaskpkesh afftreftgl epivsdvirg
      541 icrdflesqq
//
LOCUS       XP_061015060             550 aa            linear   MAM 02-DEC-2023
DEFINITION  cochlin [Dama dama].
ACCESSION   XP_061015060
VERSION     XP_061015060.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159077.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..550
                     /product="cochlin"
                     /calculated_mol_wt=59577
     Region          30..112
                     /region_name="LCCL"
                     /note="LCCL domain; smart00603"
                     /db_xref="CDD:128866"
     Region          164..328
                     /region_name="vWA_collagen_alphaI-XII-like"
                     /note="Collagen: The extracellular matrix represents a
                     complex alloy of variable members of diverse protein
                     families defining structural integrity and various
                     physiological functions. The most abundant family is the
                     collagens with more than 20 different...; cd01482"
                     /db_xref="CDD:238759"
     Site            order(171,173,175,242,275)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238759"
     Site            order(173..175,177,242)
                     /site_type="active"
                     /note="integrin-collagen binding site [active]"
                     /db_xref="CDD:238759"
     Region          366..527
                     /region_name="vWA_collagen"
                     /note="von Willebrand factor (vWF) type A domain;
                     equivalent to the I-domain of integrins. This domain has a
                     variety of functions including: intermolecular adhesion,
                     cell migration, signalling, transcription, and DNA repair.
                     In integrins these domains form...; cd01472"
                     /db_xref="CDD:238749"
     Site            order(373,375,377,444,475)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238749"
     Site            order(375..377,379,444)
                     /site_type="active"
                     /note="integrin-collagen binding site [active]"
                     /db_xref="CDD:238749"
     Site            order(405,420..421,432..433,435..436)
                     /site_type="active"
                     /note="putative vWF-collagen binding site [active]"
                     /db_xref="CDD:238749"
     CDS             1..550
                     /gene="COCH"
                     /coded_by="XM_061159077.1:68..1720"
                     /db_xref="GeneID:133067972"
ORIGIN      
        1 mwaswipvlc lgvclllple pvgsegavpi aitcftrgld irkekadvlc pggcpleefs
       61 vfghivyasv ssicgaavhr gvignsggpv riyslpgren yssvvangiq sqtlsrwsas
      121 ftvtkgksgt qeatgqavst ahpatgkrlk ktpekktgnk dckadiafli dgsfnigqrr
      181 fnlqknfvgk valmlgigte gphvglvqas ehpkiefylk nftsakdvlf aikevgfrgg
      241 nsntgkalkh taqkfftadt gvrkgipkvv vvfidgwpsd dieeagivar efgvnvfivs
      301 vakpipeelg mvqdvafvdk avcrnngffs yhmpnwfgtt kyvkplvqkl ctheqmmcsk
      361 tcynsvniaf lidgsssvge snfrlmlefv sniaktfeis digakiaavq ftydqrtefs
      421 ftdystkenv lavirnirym sggtatgdai sftvrnvfgp mrdspnknfl vivtdgqsyd
      481 dvrgpaaaah dagitifsvg vawaplddlk dmaskpkesh afftreftgl epivsdvirg
      541 icrdflesqq
//
LOCUS       XP_061015061             550 aa            linear   MAM 02-DEC-2023
DEFINITION  cochlin [Dama dama].
ACCESSION   XP_061015061
VERSION     XP_061015061.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159078.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..550
                     /product="cochlin"
                     /calculated_mol_wt=59577
     Region          30..112
                     /region_name="LCCL"
                     /note="LCCL domain; smart00603"
                     /db_xref="CDD:128866"
     Region          164..328
                     /region_name="vWA_collagen_alphaI-XII-like"
                     /note="Collagen: The extracellular matrix represents a
                     complex alloy of variable members of diverse protein
                     families defining structural integrity and various
                     physiological functions. The most abundant family is the
                     collagens with more than 20 different...; cd01482"
                     /db_xref="CDD:238759"
     Site            order(171,173,175,242,275)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238759"
     Site            order(173..175,177,242)
                     /site_type="active"
                     /note="integrin-collagen binding site [active]"
                     /db_xref="CDD:238759"
     Region          366..527
                     /region_name="vWA_collagen"
                     /note="von Willebrand factor (vWF) type A domain;
                     equivalent to the I-domain of integrins. This domain has a
                     variety of functions including: intermolecular adhesion,
                     cell migration, signalling, transcription, and DNA repair.
                     In integrins these domains form...; cd01472"
                     /db_xref="CDD:238749"
     Site            order(373,375,377,444,475)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238749"
     Site            order(375..377,379,444)
                     /site_type="active"
                     /note="integrin-collagen binding site [active]"
                     /db_xref="CDD:238749"
     Site            order(405,420..421,432..433,435..436)
                     /site_type="active"
                     /note="putative vWF-collagen binding site [active]"
                     /db_xref="CDD:238749"
     CDS             1..550
                     /gene="COCH"
                     /coded_by="XM_061159078.1:49..1701"
                     /db_xref="GeneID:133067972"
ORIGIN      
        1 mwaswipvlc lgvclllple pvgsegavpi aitcftrgld irkekadvlc pggcpleefs
       61 vfghivyasv ssicgaavhr gvignsggpv riyslpgren yssvvangiq sqtlsrwsas
      121 ftvtkgksgt qeatgqavst ahpatgkrlk ktpekktgnk dckadiafli dgsfnigqrr
      181 fnlqknfvgk valmlgigte gphvglvqas ehpkiefylk nftsakdvlf aikevgfrgg
      241 nsntgkalkh taqkfftadt gvrkgipkvv vvfidgwpsd dieeagivar efgvnvfivs
      301 vakpipeelg mvqdvafvdk avcrnngffs yhmpnwfgtt kyvkplvqkl ctheqmmcsk
      361 tcynsvniaf lidgsssvge snfrlmlefv sniaktfeis digakiaavq ftydqrtefs
      421 ftdystkenv lavirnirym sggtatgdai sftvrnvfgp mrdspnknfl vivtdgqsyd
      481 dvrgpaaaah dagitifsvg vawaplddlk dmaskpkesh afftreftgl epivsdvirg
      541 icrdflesqq
//
LOCUS       XP_061015062             144 aa            linear   MAM 02-DEC-2023
DEFINITION  AP-4 complex subunit sigma-1 isoform X1 [Dama dama].
ACCESSION   XP_061015062
VERSION     XP_061015062.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159079.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..144
                     /product="AP-4 complex subunit sigma-1 isoform X1"
                     /calculated_mol_wt=16860
     Region          3..140
                     /region_name="AP4_sigma"
                     /note="AP-4 complex subunit sigma; cd14832"
                     /db_xref="CDD:341436"
     Site            order(9..10,15,62..65,88..89,92,97..101)
                     /site_type="other"
                     /note="dileucine motif interface [polypeptide binding]"
                     /db_xref="CDD:341436"
     Site            order(14..17,19..20,45..49,74..79,81..83,86,97,104..107,
                     111..112,115..116,119..130)
                     /site_type="other"
                     /note="putative AP-4 epsilon interface [polypeptide
                     binding]"
                     /db_xref="CDD:341436"
     Site            order(26,30,34,37,51..54)
                     /site_type="other"
                     /note="putative AP-4 mu interface [polypeptide binding]"
                     /db_xref="CDD:341436"
     CDS             1..144
                     /gene="AP4S1"
                     /coded_by="XM_061159079.1:412..846"
                     /db_xref="GeneID:133067973"
ORIGIN      
        1 mikfflmvnk qgqtrlskyy ehveinkrtl letevikscl srsneqcsfi eykdfkliyr
       61 qyaalfivvg vndtenemai yefihnfvev lddyfsrvse ldimfnldkv hiildemvln
      121 gcivetnrar ilapllildk msds
//
LOCUS       XP_061015063             144 aa            linear   MAM 02-DEC-2023
DEFINITION  AP-4 complex subunit sigma-1 isoform X1 [Dama dama].
ACCESSION   XP_061015063
VERSION     XP_061015063.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159080.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..144
                     /product="AP-4 complex subunit sigma-1 isoform X1"
                     /calculated_mol_wt=16860
     Region          3..140
                     /region_name="AP4_sigma"
                     /note="AP-4 complex subunit sigma; cd14832"
                     /db_xref="CDD:341436"
     Site            order(9..10,15,62..65,88..89,92,97..101)
                     /site_type="other"
                     /note="dileucine motif interface [polypeptide binding]"
                     /db_xref="CDD:341436"
     Site            order(14..17,19..20,45..49,74..79,81..83,86,97,104..107,
                     111..112,115..116,119..130)
                     /site_type="other"
                     /note="putative AP-4 epsilon interface [polypeptide
                     binding]"
                     /db_xref="CDD:341436"
     Site            order(26,30,34,37,51..54)
                     /site_type="other"
                     /note="putative AP-4 mu interface [polypeptide binding]"
                     /db_xref="CDD:341436"
     CDS             1..144
                     /gene="AP4S1"
                     /coded_by="XM_061159080.1:2251..2685"
                     /db_xref="GeneID:133067973"
ORIGIN      
        1 mikfflmvnk qgqtrlskyy ehveinkrtl letevikscl srsneqcsfi eykdfkliyr
       61 qyaalfivvg vndtenemai yefihnfvev lddyfsrvse ldimfnldkv hiildemvln
      121 gcivetnrar ilapllildk msds
//
LOCUS       XP_061015064             121 aa            linear   MAM 02-DEC-2023
DEFINITION  AP-4 complex subunit sigma-1 isoform X2 [Dama dama].
ACCESSION   XP_061015064
VERSION     XP_061015064.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159081.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..121
                     /product="AP-4 complex subunit sigma-1 isoform X2"
                     /calculated_mol_wt=14262
     Region          3..>105
                     /region_name="longin-like"
                     /note="Longin-like domains; cl38905"
                     /db_xref="CDD:365781"
     CDS             1..121
                     /gene="AP4S1"
                     /coded_by="XM_061159081.1:412..777"
                     /db_xref="GeneID:133067973"
ORIGIN      
        1 mikfflmvnk qgqtrlskyy ehveinkrtl letevikscl srsneqcsfi eykdfkliyr
       61 qyaalfivvg vndtenemai yefihnfvev lddyfsrvse ldvsffsavs qvfhtswqrt
      121 g
//
LOCUS       XP_061015065             121 aa            linear   MAM 02-DEC-2023
DEFINITION  AP-4 complex subunit sigma-1 isoform X2 [Dama dama].
ACCESSION   XP_061015065
VERSION     XP_061015065.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159082.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..121
                     /product="AP-4 complex subunit sigma-1 isoform X2"
                     /calculated_mol_wt=14262
     Region          3..>105
                     /region_name="longin-like"
                     /note="Longin-like domains; cl38905"
                     /db_xref="CDD:365781"
     CDS             1..121
                     /gene="AP4S1"
                     /coded_by="XM_061159082.1:413..778"
                     /db_xref="GeneID:133067973"
ORIGIN      
        1 mikfflmvnk qgqtrlskyy ehveinkrtl letevikscl srsneqcsfi eykdfkliyr
       61 qyaalfivvg vndtenemai yefihnfvev lddyfsrvse ldvsffsavs qvfhtswqrt
      121 g
//
LOCUS       XP_061015066             121 aa            linear   MAM 02-DEC-2023
DEFINITION  AP-4 complex subunit sigma-1 isoform X2 [Dama dama].
ACCESSION   XP_061015066
VERSION     XP_061015066.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159083.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..121
                     /product="AP-4 complex subunit sigma-1 isoform X2"
                     /calculated_mol_wt=14262
     Region          3..>105
                     /region_name="longin-like"
                     /note="Longin-like domains; cl38905"
                     /db_xref="CDD:365781"
     CDS             1..121
                     /gene="AP4S1"
                     /coded_by="XM_061159083.1:413..778"
                     /db_xref="GeneID:133067973"
ORIGIN      
        1 mikfflmvnk qgqtrlskyy ehveinkrtl letevikscl srsneqcsfi eykdfkliyr
       61 qyaalfivvg vndtenemai yefihnfvev lddyfsrvse ldvsffsavs qvfhtswqrt
      121 g
//
LOCUS       XP_061015067             346 aa            linear   MAM 02-DEC-2023
DEFINITION  myeloid-associated differentiation marker-like [Dama dama].
ACCESSION   XP_061015067
VERSION     XP_061015067.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159084.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..346
                     /product="myeloid-associated differentiation marker-like"
                     /calculated_mol_wt=38765
     CDS             1..346
                     /gene="LOC133067977"
                     /coded_by="XM_061159084.1:1..1041"
                     /db_xref="GeneID:133067977"
ORIGIN      
        1 mslfsgldck titslllrvg qllsvlvpil lasedalkeg vinwcmfiwc icfaltfvgf
       61 vlelgslfkv plcniqsllr lsdkfqyhlr lswdgilhaf gcyfavvcla aaiifgptyi
      121 qffspgptrn raitatafsc vaallyaiev awvcrrpgkm fcfwptfpgv lrrlenyvan
      181 iilaftcntd lylhqpalvw cvavywicfi lgamnflvng cdcdndkklp lpvpcllwvq
      241 tvlsvllyat avilwplyqf heklggqpqr ssdmscsdqi sifvciwdqq lavailtvin
      301 llvyvadmvy lvreafrltl tgdrkrerlt ahradgapwa lpdgdc
//
LOCUS       XP_061015070             222 aa            linear   MAM 02-DEC-2023
DEFINITION  myeloid-associated differentiation marker-like [Dama dama].
ACCESSION   XP_061015070
VERSION     XP_061015070.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159087.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..222
                     /product="myeloid-associated differentiation marker-like"
                     /calculated_mol_wt=24846
     CDS             1..222
                     /gene="LOC133067978"
                     /coded_by="XM_061159087.1:1..669"
                     /db_xref="GeneID:133067978"
ORIGIN      
        1 mrtfsglssr tavgfflhle qllstcvpcl lvasmdtrse ctvnwsvslw cicfsgtltv
       61 fmvelcglqs hfpltcydll chyafyftqf clfasiifat nyvrflpqsh trsqaiaata
      121 csfissvlya ievawtcalt gdtscflpsd pgkleglvif llyvilalfl sttincnsdf
      181 qytsamvkqt ilcsiffylg mmsalwredn netripvyyp ll
//
LOCUS       XP_061015071             329 aa            linear   MAM 02-DEC-2023
DEFINITION  myeloid-associated differentiation marker-like [Dama dama].
ACCESSION   XP_061015071
VERSION     XP_061015071.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159088.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 19% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..329
                     /product="myeloid-associated differentiation marker-like"
                     /calculated_mol_wt=36994
     Region          16..141
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     Region          152..292
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     CDS             1..329
                     /gene="LOC133067979"
                     /coded_by="XM_061159088.1:1..990"
                     /db_xref="GeneID:133067979"
ORIGIN      
        1 mtimtptpls sglysvttmr yflhflqlls tcmtfflvtr estwsvdisn wsmfvwcfcf
       61 avtlltlive lctlqdklhf swdsflitsa cycalfclsa siiypiiylq ifpdgsprhh
      121 viaatafscv asvayaievv wtcvrtgess ysllgllkrl eifvacvifa flsntypheh
      181 qpalmwcvtv ycicfilgav ailwhrcdcd eslpysslgf gqsvlsilly ttalvlwply
      241 qfneqfggqp qrsnelscid kltsymciwd qrlavavlta inlliyvadl viltvrlpef
      301 tstedvrgcq slvrippmsg gnqecraep
//
LOCUS       XP_061015072             297 aa            linear   MAM 02-DEC-2023
DEFINITION  myeloid-associated differentiation marker-like [Dama dama].
ACCESSION   XP_061015072
VERSION     XP_061015072.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159089.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..297
                     /product="myeloid-associated differentiation marker-like"
                     /calculated_mol_wt=33446
     Region          3..123
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     CDS             1..297
                     /gene="LOC133067980"
                     /coded_by="XM_061159089.1:1..894"
                     /db_xref="GeneID:133067980"
ORIGIN      
        1 mgyflrtlql lstcvaislv gsldswtvpt snwsfvilcf cfvvtfiili ieslalqycf
       61 sfswgdfilc hacylalfcl lvsiiypaty vqflfytpsw dhaiaatafc fistvayate
      121 aiwilgwpqt gdftgyigsl pfllkmletl vacvilpfis npslymdhpf lvscvavysi
      181 cfilgivtil lnladyenrl pissstfhlv lsllsvllyi galvlwslyq fdekfggqpe
      241 rsrdmscqhr ltnyvcvwdq rltvailtai nlliymadlv ywacqfsvgt edqprds
//
LOCUS       XP_061015073             314 aa            linear   MAM 02-DEC-2023
DEFINITION  myeloid-associated differentiation marker-like [Dama dama].
ACCESSION   XP_061015073
VERSION     XP_061015073.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159090.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 10% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..314
                     /product="myeloid-associated differentiation marker-like"
                     /calculated_mol_wt=34842
     Region          15..130
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     Region          148..290
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     CDS             1..314
                     /gene="LOC133067982"
                     /coded_by="XM_061159090.1:1..945"
                     /db_xref="GeneID:133067982"
ORIGIN      
        1 mcsssgllsa vllgyflrll qllstclafs lvasvgtwmg avsnwsifiw cfcflvtlii
       61 liiescglqs rfpfswynfl ityacyaall cisasiiypi tyiwffphgr sqdhaiaata
      121 fsciaavaya sevawartwv wlgvitgymv tvpgllkgle afvagvifaf iidshlylyq
      181 palvwcvavy sicfllaata lllnwcdcdn rlpvafptfl lgltvlsvll ytsalvlwpl
      241 yqfaeqfggq perprcndgl vysvctwdqq lavavltavn llvyvvdlvf lahmvfsrte
      301 dqlrgsqfpl lyks
//
LOCUS       XP_061015074             319 aa            linear   MAM 02-DEC-2023
DEFINITION  myeloid-associated differentiation marker-like [Dama dama].
ACCESSION   XP_061015074
VERSION     XP_061015074.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159091.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..319
                     /product="myeloid-associated differentiation marker-like"
                     /calculated_mol_wt=36368
     Region          6..132
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     Region          148..290
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     CDS             1..319
                     /gene="LOC133067983"
                     /coded_by="XM_061159091.1:1..960"
                     /db_xref="GeneID:133067983"
ORIGIN      
        1 mpstsrffrv fwflrlpqlf stcvafslva dmgflrgaig nwsmaiwclc famtlvvviv
       61 eykdfqsffp fywynfpvty acyaalvcls isiiysityv qflpyglfgd raiaatafsc
      121 vasvfyamdv afmwncykld niscymhtvp gllkvletfm agvifaflsn tslymhqpal
      181 ewcvavysic filssvalll slwefdnrll fpfpifqlvi nllsillyvs alllwplyqc
      241 yeefvrqhqr ssdgdcgdel tyhmctwdqr lavavltain llvyvadlvy warqvsvgtq
      301 gpvlifcsqe vssplsdil
//
LOCUS       XP_061015075             321 aa            linear   MAM 02-DEC-2023
DEFINITION  myeloid-associated differentiation marker-like [Dama dama].
ACCESSION   XP_061015075
VERSION     XP_061015075.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159092.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 11% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..321
                     /product="myeloid-associated differentiation marker-like"
                     /calculated_mol_wt=36105
     Region          20..138
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     Region          154..296
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     CDS             1..321
                     /gene="LOC133067984"
                     /coded_by="XM_061159092.1:1..966"
                     /db_xref="GeneID:133067984"
ORIGIN      
        1 mpttssspgl cswtimgcsv rllqllstgv asslvasvgt qrvgvdnwfm ffwcfcytvt
       61 lliiiveysk lrfhfsshwy nfpinyacya alfcfstsii sattyvpflp qgptrnhait
      121 atafsciaav aygtefvwtw vghrprrivt yvhtvhgllk llenfvacii fafisntsly
      181 qhqpalvwcv avystcfilg tlaillglvy cdnwlpirfp vsqlgltlfs illyisalll
      241 wplyqfnedl ggqsqrssdm tcrdefttyv cpwdqrlava iltavnllly vpdlviascl
      301 vsdrlhprap dslylwsyyv v
//
LOCUS       XP_061015077             168 aa            linear   MAM 02-DEC-2023
DEFINITION  D-aminoacyl-tRNA deacylase 2 [Dama dama].
ACCESSION   XP_061015077
VERSION     XP_061015077.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159094.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..168
                     /product="D-aminoacyl-tRNA deacylase 2"
                     /calculated_mol_wt=18461
     Region          11..167
                     /region_name="Tyr_Deacylase"
                     /note="D-Tyr-tRNA(Tyr) deacylase; pfam02580"
                     /db_xref="CDD:460603"
     CDS             1..168
                     /gene="DTD2"
                     /coded_by="XM_061159094.1:104..610"
                     /db_xref="GeneID:133067990"
ORIGIN      
        1 madsgrtpqa rallqqclha rlqvrpaegd veaewvevqr glviyvcffk gadkellpkm
       61 vntllnvkls etengkhvsi ldlpgnilii pqatlggrvk grsmqyhcns gkeeglelys
      121 qfvnlckkel asnskcaeag vvvkhgtygn rqvlkldtng pythlief
//
LOCUS       XP_061015078             580 aa            linear   MAM 02-DEC-2023
DEFINITION  stabilizer of axonemal microtubules 2 [Dama dama].
ACCESSION   XP_061015078
VERSION     XP_061015078.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159095.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 16% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..580
                     /product="stabilizer of axonemal microtubules 2"
                     /calculated_mol_wt=65611
     CDS             1..580
                     /gene="SAXO2"
                     /coded_by="XM_061159095.1:1..1743"
                     /db_xref="GeneID:133067992"
ORIGIN      
        1 mtyrkgrlrv hnekqsgasg hlssggsrsh pefapgpapp prrpgcphrl elpeedaqrp
       61 agphspapaa qslplgprrr phharrrrpq pagaasvswa pavaltteaa verrklqiwr
      121 srgagsmrtw clcqictcgr hhcphgttri yencggscat teylekypty gnvlppqslk
      181 pkeeyqaygg kmegittfks dyrpyeidkq prhapeeykp kqgvidlgtt ykrdfnsykv
      241 hpvvivrple rqqvkkgkld tvptykddyr awdiqksely kpqqtyyppt vrfgnsttfq
      301 ddyvpreikp rqsykpspav erstipfsgn tshrldyvph qpefklakpk dsykppdqpl
      361 edltthrcdf qglvgetaki crpahtrvaq dapfegstef rdsfqawalp apqvqkvley
      421 fppagtmqlq stshldyvph qatrvfpirp asrrrnhsfp fqgksttmqd fpawescrqg
      481 likqepqips psgkfdglst frshyvphel iptksckpvd aplkrslpfd dvttysleym
      541 pkkletcpas ypsppgylfe ttnsrghkff rkiapvvkaf
//
LOCUS       XP_061015079             489 aa            linear   MAM 02-DEC-2023
DEFINITION  nucleus accumbens-associated protein 1-like [Dama dama].
ACCESSION   XP_061015079
VERSION     XP_061015079.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159096.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..489
                     /product="nucleus accumbens-associated protein 1-like"
                     /calculated_mol_wt=52692
     Region          <34..87
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          357..435
                     /region_name="BEN"
                     /note="The BEN domain is found in diverse animal proteins;
                     smart01025"
                     /db_xref="CDD:214981"
     CDS             1..489
                     /gene="LOC133067994"
                     /coded_by="XM_061159096.1:1..1470"
                     /db_xref="GeneID:133067994"
ORIGIN      
        1 mtrrkrpwvn qgntlnsdtg nlqgnktrcs sniavqpqsf qqilsfcytg rlsmnmgdqf
       61 llmytagflq iqeimekgte fflkvsspsc ysqglhaeea pssepqspva qtsswpacgt
      121 plplvsrvkt eqqesdsvqc tpvakrlwds gqkeagggsg gngsrkmakf stpdlavnrp
      181 aqqapvvaaa qptgvaagag agpptagaaa aggvsgpsts ertspgtssa ytsdspgsyh
      241 needeeedag eegtdeqsrq icnvytmyrm mnvgqtaekv ealpeqvape srnrirvrqd
      301 laplpaelin qignrchpkl ydegdpsekl elvtgtnvyi traqlmnchv sagtrhkvll
      361 rrllasffdr ntlanscgtg irsssnnpsr kpldsrvlha vkyycqnfap nfkesemnai
      421 aadmctnaqr vvrkswipkv kplmaegday ttfisytgki epdmmgvehg yetashdgea
      481 gpsaeealq
//
LOCUS       XP_061015080              72 aa            linear   MAM 02-DEC-2023
DEFINITION  anaphase-promoting complex subunit 13-like [Dama dama].
ACCESSION   XP_061015080
VERSION     XP_061015080.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159097.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..72
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..72
                     /product="anaphase-promoting complex subunit 13-like"
                     /calculated_mol_wt=8180
     Region          1..71
                     /region_name="Apc13p"
                     /note="Apc13p protein; pfam05839"
                     /db_xref="CDD:310437"
     CDS             1..72
                     /gene="LOC133067995"
                     /coded_by="XM_061159097.1:27..245"
                     /db_xref="GeneID:133067995"
ORIGIN      
        1 mdsevqrdgs ildlidnawr edklpyedva iplnelpepe qdnrgttesv keqemkwmdl
       61 alqclrgnvp pq
//
LOCUS       XP_061015081             310 aa            linear   MAM 02-DEC-2023
DEFINITION  cilia- and flagella-associated protein 161 [Dama dama].
ACCESSION   XP_061015081
VERSION     XP_061015081.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159098.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..310
                     /product="cilia- and flagella-associated protein 161"
                     /calculated_mol_wt=35373
     CDS             1..310
                     /gene="CFAP161"
                     /coded_by="XM_061159098.1:1..933"
                     /db_xref="GeneID:133067997"
ORIGIN      
        1 maqnlygprv rignwnedvy leeeimkdfl akrdkgqlli qrnrrlkenl lrpmqlsvse
       61 dgyihygdkv mlvspdhpet eadlflrgdl slcmtpdeik ahlsnelevp cglsaaqiki
      121 pvgrntftil caagevigqv lrygqnfrlg itggfddrml ylssdhrtll ksskrswlqe
      181 vslthedsyl ncwqaafpnp qlrleyegsp vpantkilit hchtnrglva hrhlflrtyf
      241 gkeaevaaht yldshrvekp knhwmlvtga prkdlstmld lpkppaedtr aleqareqfr
      301 ickfnqppnv
//
LOCUS       XP_061015082             225 aa            linear   MAM 02-DEC-2023
DEFINITION  CCHC-type zinc finger nucleic acid binding protein-like [Dama
            dama].
ACCESSION   XP_061015082
VERSION     XP_061015082.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159099.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 14% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..225
                     /product="CCHC-type zinc finger nucleic acid binding
                     protein-like"
                     /calculated_mol_wt=24136
     Region          78..219
                     /region_name="PTZ00368"
                     /note="universal minicircle sequence binding protein
                     (UMSBP); Provisional"
                     /db_xref="CDD:173561"
     CDS             1..225
                     /gene="LOC133067999"
                     /coded_by="XM_061159099.1:1..678"
                     /db_xref="GeneID:133067999"
ORIGIN      
        1 mkkkdlrlir atpaiqmlri segtrhtagr pacgagrdpe nkqpplreps sgsapesrpl
       61 raaagaedlt aalssnecfk cgrsghware cpagggrgrg mrsrgrggft sdrgfqfvss
      121 slpdicyrcg esghlakdcd lqedacyncg rgghlardcd hadeqkcysc gefghiqkdc
      181 tkvkcyrcge tghvaincsk tsevncyrcg esghqarect ieata
//
LOCUS       XP_061015084             538 aa            linear   MAM 02-DEC-2023
DEFINITION  protein ENTREP2 [Dama dama].
ACCESSION   XP_061015084
VERSION     XP_061015084.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159101.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..538
                     /product="protein ENTREP2"
                     /calculated_mol_wt=56694
     Region          34..199
                     /region_name="CD20"
                     /note="CD20-like family; pfam04103"
                     /db_xref="CDD:461174"
     Region          255..>438
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..538
                     /gene="ENTREP2"
                     /coded_by="XM_061159101.1:1..1617"
                     /db_xref="GeneID:133068000"
ORIGIN      
        1 mppaggprap rpaalprsls rlrecpgrsr ivlalgatqm algclivavs faalalttsa
       61 rvrhscpfwa gfsvllsgli gvvswkrpls lvitffmlls avcvmlnlag silscqnaql
      121 vsslegcqli kfdsvevcvc cetqhqvsgc snlgetlkln plredcnavr ltlkellfsv
      181 calnvlstiv calatamccm qmvsadvlqm flpqrapsas pacltphgtv lhqtldfdef
      241 vpplppppyy ppeytctpta eahrglhldf asspfgtlyg vainspglly paelpppyea
      301 vvgpsptnql psadpqvtep gpgdpdvtag fssqaltdss sllvsegtaa pglscpspdn
      361 pmstplptph phhtspegph kgtrvrsgpr rmarsisdpt sctsratgda sshtpscsqd
      421 leaglsraal gtatlshsit aacacrhqls prksdawkvd prstpealqt vskerlrslv
      481 dskafedarv lvakflehss sslpvevrhv vgsarsavpp eeclmeeavl sthvlgql
//
LOCUS       XP_061015085             408 aa            linear   MAM 02-DEC-2023
DEFINITION  relaxin-3 receptor 1-like [Dama dama].
ACCESSION   XP_061015085
VERSION     XP_061015085.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159102.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 31% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..408
                     /product="relaxin-3 receptor 1-like"
                     /calculated_mol_wt=44689
     Region          102..352
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          102..123
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          140..162
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          184..200
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          228..254
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          277..299
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          320..345
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..408
                     /gene="LOC133068003"
                     /coded_by="XM_061159102.1:1..1227"
                     /db_xref="GeneID:133068003"
ORIGIN      
        1 masarrscrm arafgavlpl nwfgdassrq psnssvgdgs estrptwgpr sldglaeaga
       61 alalraliag aylalcavgl vgnvlvlvlv rsqqrrrrsl lncfllnlaa tdlqfvltlp
      121 fwavdmvrdf nwpfggamck vvltltvlnm yasgfflsam svaryyavar alrprrpgtl
      181 wavcvcsllw atavlatapt alfaaaasig gerlcllrfp dggpdwlafy hlqkitvafv
      241 lplvtlgtcs llllrflrrr rarwpsgvrp rrrsrvtral acvllvfvlc wlpnqaltfw
      301 gvliklnavp wdrayflvqa ylfpvsicla hsnsclnpll ycllrrdfrq glqelcgrak
      361 rpadlrpgsp taapqlrgsl irpepgephl svrttrcsis tksdgadi
//
LOCUS       XP_061015086             783 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: long-chain-fatty-acid--CoA ligase ACSBG1 [Dama
            dama].
ACCESSION   XP_061015086
VERSION     XP_061015086.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159103.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 7% of CDS bases
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..783
                     /product="LOW QUALITY PROTEIN: long-chain-fatty-acid--CoA
                     ligase ACSBG1"
                     /calculated_mol_wt=86618
     Region          184..778
                     /region_name="ACSBG_like"
                     /note="Bubblegum-like very long-chain fatty acid CoA
                     synthetase (VL-FACS); cd05933"
                     /db_xref="CDD:341256"
     Site            order(338,341..346,348..349)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341256"
     Site            order(341,463..464,531..536,609,621,624,636,758)
                     /site_type="other"
                     /note="putative AMP binding site [chemical binding]"
                     /db_xref="CDD:341256"
     Site            order(341,385..386,434,436..437,440,463..464,531..536,609,
                     621,624,633..636,735)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:341256"
     Site            order(385,436..437,440,463,633..635,729,735)
                     /site_type="other"
                     /note="putative CoA binding site [chemical binding]"
                     /db_xref="CDD:341256"
     CDS             1..783
                     /gene="ACSBG1"
                     /coded_by="XM_061159103.1:1..2352"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /db_xref="GeneID:133068004"
ORIGIN      
        1 mlgcledgfg vegafrrpsr rpeavpfpfr gsvglagsri rwpggqrrre pcpkgclrlv
       61 phssgagrsc ppxnpsmpds raapqeslld aslgttqenl gtssltdgqt lskeppshal
      121 kfstpekvkd aqlnppeeal wttradgrvr lridpicsqt prtvhqmfst aldkygdlsa
      181 mgfkqqgtwe hisytqyyll arkaakgflk lglerahsva vlafnspewf fsavgavfag
      241 giitgiytts speacqyiay dcraniimvd tqkqlekilk iwknlphlka vviygepppt
      301 qmpsvytmee fmelgnevpe ealdtiinaq kpnqccalvy tsgttgkpkg vmlsqdnitw
      361 tarygsqagd iqpaeiqqev vvsylplshi aaqiydlwtg iqwgaqvcfa epdalkgslv
      421 ntlrevepts hmgvprvwek imeriqevaa qsgfirrkml lwamsvtleq nltcpssdlk
      481 pfttrladyl vlakvrqalg fakcqknfyg aapmtaetqh fflglnirly agyglsetsg
      541 phfmsspyny rlyssgkvvp gcrvklvned aegigeiclw grtifmgyln medktceaid
      601 pegwlhtgdt grldadgfly itgrlkelii taggenvppv pieeavktel piisnamlig
      661 dqrkflsmll tlkctldpdt feptdnlteq avefcqrvgs katmvsevve kkdeavyqai
      721 eegiqrvnmn aaarpyhiqk wailerdfsi sggelgptmk lkrlvvleky kdvidsfyqe
      781 qke
//
LOCUS       XP_061015087             146 aa            linear   MAM 02-DEC-2023
DEFINITION  pro-neuregulin-4, membrane-bound isoform-like [Dama dama].
ACCESSION   XP_061015087
VERSION     XP_061015087.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159104.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..146
                     /product="pro-neuregulin-4, membrane-bound isoform-like"
                     /calculated_mol_wt=15944
     Region          <9..89
                     /region_name="PHA03099"
                     /note="epidermal growth factor-like protein (EGF-like
                     protein); Provisional"
                     /db_xref="CDD:165381"
     CDS             1..146
                     /gene="LOC133068007"
                     /coded_by="XM_061159104.1:1..441"
                     /db_xref="GeneID:133068007"
ORIGIN      
        1 mttdheepcg pshrsfclng glcyviptip spfcrcieny tgarceevfl psssiqtksd
       61 lfaafvaliv llgtlilgal yflcrahyre wqqsdgrrsf lskfpqgspa acgqaagwkg
      121 hlqrassvqy dinlvetsst svhhse
//
LOCUS       XP_061015089             487 aa            linear   MAM 02-DEC-2023
DEFINITION  secretory carrier-associated membrane protein 5 [Dama dama].
ACCESSION   XP_061015089
VERSION     XP_061015089.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159106.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 41% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..487
                     /product="secretory carrier-associated membrane protein 5"
                     /calculated_mol_wt=51936
     Region          258..431
                     /region_name="SCAMP"
                     /note="SCAMP family; pfam04144"
                     /db_xref="CDD:461193"
     CDS             1..487
                     /gene="SCAMP5"
                     /coded_by="XM_061159106.1:1..1464"
                     /db_xref="GeneID:133068012"
ORIGIN      
        1 msvgrvgqgp agvrarerrg rrladwdgai lafhfsplga allgdlgaqc saplaeappq
       61 slgapplppg papypappar apaspalrrs sdtrawelra prgamavgtt pppplrpfap
      121 eplfspegqp vrcqqsvgsr rtevsasprl traegsqtpp htrwgaaarw klgnlaraaa
      181 agrggagarg tgprrarara raypasspga argrlraasl gagqrgglsa aerqrrfetk
      241 rrgqaagpag aimsekvnnf pplpkfiplk pcfyqdfead ippqhlsmtk rlyylwmlns
      301 vtlavnlvgc lawligggga tnfglaflwl ilftpcsyvc wfrpiykafk tdssfsfmaf
      361 fftfmaqlvi siiqavgipg wgvcgwiati sffgtnigsa vvmliptvmf tvmavfsfia
      421 lsmvhkfyrg sggsfskaqe ewttgawknp hvqqaaqnaa mgaaqgamnq pqtqysatpn
      481 ytysnem
//
LOCUS       XP_061015090             528 aa            linear   MAM 02-DEC-2023
DEFINITION  protein ERGIC-53-like [Dama dama].
ACCESSION   XP_061015090
VERSION     XP_061015090.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159107.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..528
                     /product="protein ERGIC-53-like"
                     /calculated_mol_wt=57931
     Region          32..254
                     /region_name="lectin_L-type"
                     /note="legume lectins; cl14058"
                     /db_xref="CDD:472686"
     Site            order(38..39,41,54,83,86,175,191,200,202..203,218)
                     /site_type="other"
                     /note="homotetramer interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:173890"
     Site            order(38..41,54,83,85)
                     /site_type="other"
                     /note="homodimer interaction site [polypeptide binding]"
                     /db_xref="CDD:173890"
     Site            order(109,237)
                     /site_type="other"
                     /note="carbohydrate binding site [chemical binding]"
                     /db_xref="CDD:173890"
     Site            order(138,140,151)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:173890"
     CDS             1..528
                     /gene="LMAN1L"
                     /coded_by="XM_061159107.1:1..1587"
                     /db_xref="GeneID:133068013"
ORIGIN      
        1 mrvvrgldpl lcllllvlld phspegghlp qrrfeyklsf kgprlalpgv gipfwshhgd
       61 aipgleevrl apsmrnrsga vwsttpilfp aweveiqmrv tgpgrrgaqg mavwytqgrg
      121 qvgpvlgapd lgdgigilfd ssaqdpqnsp aihvlardgh tpyeplgegg slvlgscrqd
      181 frnrpypfra ritywgqrlr vtlnsgltps dpdevcvdvg plllapggff gvsaatstla
      241 ddhdvlsflt fslhepgpep psqpfleteq lrlekqlegl rarlglgtke dmtpklnygv
      301 qeegeqsfgl eetlhrhrqi lqtlqglskh laqaeqqwkq qlgspgrirp eggwaqdspc
      361 qapptpergg ylsrslgkkd sakvsallrg qqtllqdlqe mrdaaahmas raqvfylpvg
      421 tkhhfselaq ilsllqkdlr gparaaakdp hspgrsprvs sclqpgiflf flliqtvgff
      481 cyvhfrwkld mglqdylstc slplsstpqi pralgalrrq pfspsiqa
//
LOCUS       XP_061015091            1105 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: coiled-coil domain-containing protein 33 [Dama
            dama].
ACCESSION   XP_061015091
VERSION     XP_061015091.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159108.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 13% of CDS bases
            frameshifts          :: corrected 4 indels
            internal stop codons :: corrected 3 genomic stop codons
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1105
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1105
                     /product="LOW QUALITY PROTEIN: coiled-coil
                     domain-containing protein 33"
                     /calculated_mol_wt=121547
     Region          403..492
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     Region          <787..933
                     /region_name="TPH"
                     /note="Trichohyalin-plectin-homology domain; pfam13868"
                     /db_xref="CDD:464007"
     CDS             1..1105
                     /gene="CCDC33"
                     /coded_by="XM_061159108.1:1..3318"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 4 bases in 3 codons;
                     deleted 1 base in 1 codon; substituted 3 bases at 3
                     genomic stop codons"
                     /db_xref="GeneID:133068015"
ORIGIN      
        1 mlrtgpgekv mfeqtpeqrm gqviqpgdsl ivgsllsprp plpalndfma qecgastrst
       61 gcskkvkate sgcdcpggva stlvgagkqa glkihgyrvv aelrlgrgph flspkhhpsl
      121 kkgiivpdpr pqedpvnssw slpgglssec ggkafrgpep qvptsllsqr lkteektldl
      181 efevlsvgfn eegryalqls tenplqaxsg agvqlqvidg dpxptnsavt dvteqkdpgq
      241 sltltrnklv ctfpksfckn ggqhdtxlhv ealslgralg raaqwvdmat fpiypcpdqp
      301 rxivpagqeh edlyhychhl allqasadpt ahyxgdlayr vafhvfpapq ppttnchpea
      361 tqpwlspqva egpkgpmnts qkvasvishl apphkeaitv tphgvtnlpa ckdgsapwpy
      421 vvvkttsdga knqsskavts mpseptkapi wgdtvkveir aedvgheevi lkvvnnkkke
      481 elltfqipik ylhvfhpyhf elvkvrqspg lwdhptaktq lygtvvqkgs fipcyidhnh
      541 talqvlapgp sepavldthr tpvlrrvslp pqgqanqdla slglpitpls fxpsgmnfdv
      601 pwagqngcpq lskpggvpel plwhhflfqn qdgatsfsed ttlvwstapl kgseprtlni
      661 llgisvlplk srlyhkmlvg kglnglrvek lpitdtklkt rnseaptvdl sfqllssnir
      721 pwqenvltpn nskglpvldp kisdeklgvi refwfkamvs smtvpiiftw qeteaksqvp
      781 nlsretemnn yrramqkmae dilslrkqts ileaenrmlr sqlaqkevee esaspdkarn
      841 lapmkqklll seldmkkprd kvqrsqneli qkndrekell llhqarqpqa allkryqdkl
      901 qkmkaleetv rhqekviekm eqvledklrk rskplqdkpq gkpskpfpml sasglppdpt
      961 genlpvdvys vllmenlrlq eeldknrhqs apiilqpqap pdllannsdk fnllaklera
     1021 qsrilslesq ledsarrwgr ekqdlatrlq eqeyglrhps nmattdvpat lnpskdqmqp
     1081 skldplmpss etklnklsks qqtds
//
LOCUS       XP_061015093             251 aa            linear   MAM 02-DEC-2023
DEFINITION  mast cell protease 2-like [Dama dama].
ACCESSION   XP_061015093
VERSION     XP_061015093.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159110.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..251
                     /product="mast cell protease 2-like"
                     /calculated_mol_wt=27550
     Region          24..247
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cl21584"
                     /db_xref="CDD:473915"
     Site            24
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(184,222,224)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..251
                     /gene="LOC133068022"
                     /coded_by="XM_061159110.1:1..756"
                     /db_xref="GeneID:133068022"
ORIGIN      
        1 mqlenqkeee lgledraraq ageiiggtes kphsrpcmay leivtsqgkq aacggflikk
       61 glcadgralc relrqwvpfi skwelkekas ltlamgtlpl psqftfihpg rmcwvagwgk
      121 tdvkepasst lqevelrive pqvcslfpaf dhnlqlssfl spmgscsesg vlprvsgyqe
      181 gkedtasdrd ispheepvfl slmagrcgga llcarvaqgi vsyqqsnakl pavftrisyy
      241 rpwidevlne n
//
LOCUS       XP_061015094             231 aa            linear   MAM 02-DEC-2023
DEFINITION  cathepsin G-like [Dama dama].
ACCESSION   XP_061015094
VERSION     XP_061015094.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159111.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 19% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..231
                     /product="cathepsin G-like"
                     /calculated_mol_wt=25227
     Region          41..226
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            order(81,125,218)
                     /site_type="active"
                     /db_xref="CDD:238113"
     CDS             1..231
                     /gene="LOC133068027"
                     /coded_by="XM_061159111.1:1..696"
                     /db_xref="GeneID:133068027"
ORIGIN      
        1 mgltafhspp vccdsdrgta altemnglgk cgdnpsasfq grearphshp ymafiqtltp
       61 aglticggfl vhedfvmkaa lclgsqinvi lgihsvtase wtqllipvpr piphprynqr
      121 nnrndimllq lasrvrqnea mklvalpqte emldpgtqct vagwgltgln rravtfqevq
      181 ltiqrdgech slfdfytgqk qicvgdpreg kstflgdsgg plvcnnfqwc r
//
LOCUS       XP_061015095             145 aa            linear   MAM 02-DEC-2023
DEFINITION  mast cell protease 2-like [Dama dama].
ACCESSION   XP_061015095
VERSION     XP_061015095.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159112.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..145
                     /product="mast cell protease 2-like"
                     /calculated_mol_wt=15890
     Region          <1..141
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cl21584"
                     /db_xref="CDD:473915"
     Site            order(86,116,118)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..145
                     /gene="LOC133068029"
                     /coded_by="XM_061159112.1:1..438"
                     /db_xref="GeneID:133068029"
ORIGIN      
        1 mllklkekac ltlamgtlrl ppqftfirpg rmcwvagwgk tdvkepasst lqvvelrvlk
       61 pracslfptl dhnlqlcvgh pqstksafkv ilrlhtspet qggpllcagv aqgivsygqs
      121 nakppavftr ishyrpwide vlnen
//
LOCUS       XP_061015097             471 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: zinc finger and SCAN domain-containing protein
            21-like [Dama dama].
ACCESSION   XP_061015097
VERSION     XP_061015097.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159114.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 1% of CDS bases
            frameshifts          :: corrected 2 indels
            internal stop codons :: corrected 1 genomic stop codons
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..471
                     /product="LOW QUALITY PROTEIN: zinc finger and SCAN
                     domain-containing protein 21-like"
                     /calculated_mol_wt=53376
     Region          38..149
                     /region_name="SCAN"
                     /note="leucine rich region; smart00431"
                     /db_xref="CDD:128708"
     Region          <278..460
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          279..297
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          305..325
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(305,308,321,325)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          335..352
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          360..380
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          388..408
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(393,395,397,399..400,403..404,407,421,423,427..428,
                     431..432,435,449,451,453,455..456,459..460,463)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          416..436
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(416,419,432,436)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          444..464
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..471
                     /gene="LOC133068033"
                     /coded_by="XM_061159114.1:1..1416"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon;
                     deleted 1 base in 1 codon; substituted 1 base at 1 genomic
                     stop codon"
                     /db_xref="GeneID:133068033"
ORIGIN      
        1 mkvlgmatvl gprppqeqgp vivkikeeee kgkrlpmeif sqrfrqfghh dtpgpreals
       61 qlrvlccewl rpeihtkeqi lellvleqfl tilppelqaw vqehgpesae eavtlledle
      121 reldepapqa spppreqkws wekmspsgta eeslsspqle svetshryes wgpxyiqetg
      181 eeekftpplr kvrdvksktq neestdkegs seeshaegfr gdtlpmsiad kcearlerqw
      241 vnpekeretk tplqdkgsak crevvtkpap eerryifaec gkafsnssnl tkhrrthtge
      301 kpyvctkxgk afshssnltl hyrthlvdrp cdckcgkafs qssdllkhqr mhteeapyqc
      361 kdcgkafsgk gshirhyrih tgekpyqcne cgksfsqhag lsshqrlhtg ekpykckecg
      421 kafnhssnfn khhrihtgek pywcsdcgkt frsksslskh qkvhtaegeg s
//
LOCUS       XP_061015098             258 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein eL8-like [Dama dama].
ACCESSION   XP_061015098
VERSION     XP_061015098.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159115.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..258
                     /product="large ribosomal subunit protein eL8-like"
                     /calculated_mol_wt=29100
     Region          3..258
                     /region_name="SNU13"
                     /note="U4/U6.U5 small nuclear ribonucleoprotein SNU13;
                     cl42391"
                     /db_xref="CDD:455736"
     Site            order(129..134,137,141,153..154,158,179,186..189,192..193)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:411046"
     Site            order(133,136..137,140,155,157..158,160..161,164)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:411046"
     CDS             1..258
                     /gene="LOC133068035"
                     /coded_by="XM_061159115.1:1..777"
                     /db_xref="GeneID:133068035"
ORIGIN      
        1 mlkgkkvala pamvkkqeak kvvnplfekr sknfgigqdv qpkrdlncfv kwpcyihlqq
       61 qmailykrlk vppainqftq aldqqtatql lklahkyspe tkqekeqrll areektsskl
      121 ptkrspvlra gvntvttlve nknahlvvia hdmdpiklmv flptlcrkmg vpyciikgka
      181 wlgrlvhrkt ctiaafaqvn sedksalakl veairtnynd rydkichhwg gnvlrlksva
      241 litklekaka kelatklg
//
LOCUS       XP_061015100             500 aa            linear   MAM 02-DEC-2023
DEFINITION  cyclic AMP-dependent transcription factor ATF-4-like [Dama dama].
ACCESSION   XP_061015100
VERSION     XP_061015100.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159117.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 35% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..500
                     /product="cyclic AMP-dependent transcription factor
                     ATF-4-like"
                     /calculated_mol_wt=54657
     Region          428..490
                     /region_name="bZIP_ATF4"
                     /note="Basic leucine zipper (bZIP) domain of Activating
                     Transcription Factor-4 (ATF-4) and similar proteins: a
                     DNA-binding and dimerization domain; cd14692"
                     /db_xref="CDD:269840"
     Region          430..489
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269840"
     Site            order(433..434,436..438,440..445,447..449)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269840"
     Site            order(452,455,458..459,462..463,465..466,469..470,
                     472..473,476,479..480,483..484,486..487)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269840"
     CDS             1..500
                     /gene="LOC133068046"
                     /coded_by="XM_061159117.1:1..1503"
                     /db_xref="GeneID:133068046"
ORIGIN      
        1 mseiadilki sksstenllh qfgyvnpfdv wvphklskka lldskdrnvq ksarrqktea
       61 lglaapegpe aearvkgrgg rtlgeepdre rrqqsglgfg aagdlgalrs rlwaksappl
      121 sgrapgdshl lreknasfaf rgssrnalrq esrrqtsdal lrilrlvllg yplalcengl
      181 lgdylegakh fkphgfscdk akasssewla idglvsfsdn skedafsgtd wmvdkmdlke
      241 fdfndtllsi ddletmpdel latldntcgl fdpllqetnk eppqivnpig hlpeslptid
      301 qgapftflqp lppspgalss tpdhsfslel csevvisagd skpdsttcit vipqcikeed
      361 apsdndrglc mrsdsslgsp qhspstsrgs pnksllspga lggssrpnpy dppgekmvaa
      421 kvkgekldkk lqkmeqnkta atryrqknra eqealtdecn elekknealk ekadslakei
      481 qylkdlieev rkarekknvp
//
LOCUS       XP_061015101             774 aa            linear   MAM 02-DEC-2023
DEFINITION  protein-glutamine gamma-glutamyltransferase 5 [Dama dama].
ACCESSION   XP_061015101
VERSION     XP_061015101.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159118.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..774
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..774
                     /product="protein-glutamine gamma-glutamyltransferase 5"
                     /calculated_mol_wt=86344
     Region          68..179
                     /region_name="Transglut_N"
                     /note="Transglutaminase family; pfam00868"
                     /db_xref="CDD:459971"
     Region          327..420
                     /region_name="TGc"
                     /note="Transglutaminase/protease-like homologues;
                     smart00460"
                     /db_xref="CDD:214673"
     Region          561..660
                     /region_name="Transglut_C"
                     /note="Transglutaminase family, C-terminal ig like domain;
                     pfam00927"
                     /db_xref="CDD:460002"
     Region          674..771
                     /region_name="Transglut_C"
                     /note="Transglutaminase family, C-terminal ig like domain;
                     pfam00927"
                     /db_xref="CDD:460002"
     CDS             1..774
                     /gene="TGM5"
                     /coded_by="XM_061159118.1:1..2325"
                     /db_xref="GeneID:133068047"
ORIGIN      
        1 mldgavrsgq aykrsqrgae nyvppygrkg qkvteagkww trtgqtpqpc sfvcprcpit
       61 glevaltdlq sswnnvrhrt eeissnrllv rrgqafnitl ffrnrafqpg ldniifvtet
      121 gplpdlpkgt ravfslaghr gpspwiaslq aiganslevs lcappvaavg ryllkvhiks
      181 lqgpvtayql gefillfnpw cpedavyles epqrqeyvmn dygfiyqgnk nwirpcpwny
      241 gqfeeniidi clelldksln fqidpatdca lrgspvyisr vvcaminsnd dsgvlngnwg
      301 enysdgtspt ewmgsvailk qwhaagcqpv rygqcwvfaa vmctvmrclg iptrvitnfd
      361 sghdtdgnli ideyydntgr ilenkkkdtv wnfhvwnecw marndlppgf ggwqvldatp
      421 qetsnglycc gpasvraike gevdlnydta fafsmvnadc mawlvfggke qklhqdtntv
      481 gnfistksiq sderddited ykyaegslqe rqvflkalqk lkagrspgsl raesrprsvp
      541 lsdsprslat pslqpsnvvq vslkfqllds pdmgqdirfv llalnmspqf kdlkvnlsaq
      601 sllhdgspli pfwqdtafit lspeeaktyp ckipysqysq ylstdkliri salgeekssp
      661 ekilvnkiit laypsivinv lgaaivnqpl siqvvfsnpl seqvedcvlt vegsglfrrq
      721 qrvligvlkp hhkasltlea ipfksgqrqi qanlrsnkfk dikgyrnvyi dfgl
//
LOCUS       XP_061015102             512 aa            linear   MAM 02-DEC-2023
DEFINITION  serine incorporator 4 [Dama dama].
ACCESSION   XP_061015102
VERSION     XP_061015102.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159119.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..512
                     /product="serine incorporator 4"
                     /calculated_mol_wt=56282
     Region          36..477
                     /region_name="Serinc"
                     /note="Serine incorporator (Serinc); pfam03348"
                     /db_xref="CDD:460891"
     CDS             1..512
                     /gene="SERINC4"
                     /coded_by="XM_061159119.1:294..1832"
                     /db_xref="GeneID:133068048"
ORIGIN      
        1 mvgakavtsp ntslrlapqr rgvnsvimsp pfyqvsccgp vpctcccpsr wpaltespcs
       61 rlfyillhvg tsavccllls rtvvervwgk ahgiqmpsgl cahlfglsqc pvlsgsgavy
      121 rvcagtatfh llqavllidl hsrtslraql hnsfwllkll fllglcavaf cipdehlfpa
      181 whyigicggf tfillqlvli tafahswnkn wqtgaaqdcr wllavllttl gfysmagaaa
      241 vllfqhythp agcllnkmll slhlcfcgll sflsiapcir lkqprsgllq asiiscyimy
      301 ltfsalssrp pesvilqgqn htlclpglsk meshtpdtsl amlsagimya cvlfacneas
      361 ylaevfgplw ivkvysyefq kpslcfccpk tvepeegpsg maarpadqet spappvqvqq
      421 lsysysafhf vfflaslyvm vtltnwfsye gaelektftt gswatfwvkv ascwacvlly
      481 lglllapfcw sptpdpqhpi frrhchrvni ak
//
LOCUS       XP_061015103             666 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: D-glutamate cyclase, mitochondrial [Dama
            dama].
ACCESSION   XP_061015103
VERSION     XP_061015103.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159120.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 25% of CDS bases
            frameshifts          :: corrected 3 indels
            internal stop codons :: corrected 3 genomic stop codons
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..666
                     /product="LOW QUALITY PROTEIN: D-glutamate cyclase,
                     mitochondrial"
                     /calculated_mol_wt=71908
     Region          <206..313
                     /region_name="D-Glu_cyclase"
                     /note="D-glutamate cyclase; cl01790"
                     /db_xref="CDD:470346"
     Region          359..647
                     /region_name="DUF4392"
                     /note="Domain of unknown function (DUF4392); pfam14336"
                     /db_xref="CDD:464140"
     CDS             1..666
                     /gene="DGLUCY"
                     /coded_by="XM_061159120.1:1..2001"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 2 codons;
                     deleted 1 base in 1 codon; substituted 3 bases at 3
                     genomic stop codons"
                     /db_xref="GeneID:133068051"
ORIGIN      
        1 miftfhlksc lpsalrslil qkkpntrnms nmsrglxpas vvvlprplal afekfcqans
       61 gpllllgqse pdkwtlptla hsrhqgkhls srvkawewpd avasvytgsl lslsseqlkd
      121 mvtfllvaas pwerrgspht rcrnggsrek gtcpnpkarl eprtpgshlr naqsggvtit
      181 kmlgtevsia thgkclaehg latpqtavsc aiiagfccpl vitmmpapkd klgrlvqatw
      241 smggeqgqpi hsgnpellgi kdlskpdcge vvvcqsglvp vfwpslltsl eavgscrphw
      301 lsparqgctv ttdlkgtatp arhltpegip eihrvsqdpl hhsmasasai qriselkvis
      361 aidpgnkpav grlvncpgel lqasqarshv hsvllttafl qalergasmv vdqralslhk
      421 elvdevakqg vlkrsixilt yqgrsvgddq aflcrdgdpk sprfdhlvaf ehaekaaxyy
      481 narkrnvehv gdpiddlflr ahkipgisst gvsykgnklg mdkvkeamkr yirngdiltc
      541 dmeadfavia akcsdgdsdw ggdyalxlyf lnlcgvhrry lrkvtwrfrp pgeqnwtqal
      601 psvtkeekll gllvqhgvwn rlsgtlgtev xrllfhgtha qmsqklmgit mpitdvgvgs
      661 vvppql
//
LOCUS       XP_061015104             299 aa            linear   MAM 02-DEC-2023
DEFINITION  proline-rich protein 2-like [Dama dama].
ACCESSION   XP_061015104
VERSION     XP_061015104.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159121.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..299
                     /product="proline-rich protein 2-like"
                     /calculated_mol_wt=31271
     Region          <73..200
                     /region_name="PHA03378"
                     /note="EBNA-3B; Provisional"
                     /db_xref="CDD:223065"
     CDS             1..299
                     /gene="LOC133068052"
                     /coded_by="XM_061159121.1:1..900"
                     /db_xref="GeneID:133068052"
ORIGIN      
        1 menifpyknl yanihksqev eitinkgmgk psvrpphpsp apapraggrk rapragsgar
       61 gwlrhiwglp svrpggpnee tretsgptap sappgeslps rpqrsplsrk lpsglrragv
      121 aeetqppeaa aegavqrpas ppggaqqrpl evtqltrgra rdptpeplap fpaaspgspr
      181 falgesplht plrqcraaaa gyllevagal asppagtlir vtslgraprp rprplktapp
      241 slqvrpapsg pphptggarr qrgmgrgrps lhlsalglrp rlllsplpaq fsdapsgri
//
LOCUS       XP_061015105             290 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein CCDC197 [Dama dama].
ACCESSION   XP_061015105
VERSION     XP_061015105.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159122.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..290
                     /product="uncharacterized protein CCDC197"
                     /calculated_mol_wt=33241
     CDS             1..290
                     /gene="CCDC197"
                     /coded_by="XM_061159122.1:191..1063"
                     /db_xref="GeneID:133068053"
ORIGIN      
        1 mlaardagqe agprdpgnkd rdlrvlsqel cqlqakqrkl krevekhklf edylirvlek
       61 ipkghnqree peetllaamv ehygklfavs qdiqkrleaf femnqavhks lesleeghra
      121 lipclrirlc qlqrrchrkq eqwqrlergv thqkatgsge vgskeamadh dsedlkcgtl
      181 elprnellny vqaaindmaq qccssaqavp rglglfskld liqefmldkm etvrfisllt
      241 epimcwtann pkdqgrrsyr rpfrkhsvse dptprnlfas tqtsecfglc
//
LOCUS       XP_061015107             131 aa            linear   MAM 02-DEC-2023
DEFINITION  T-cell leukemia/lymphoma protein 1B [Dama dama].
ACCESSION   XP_061015107
VERSION     XP_061015107.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159124.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 50% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..131
                     /product="T-cell leukemia/lymphoma protein 1B"
                     /calculated_mol_wt=14475
     Region          1..109
                     /region_name="TCL1_MTCP1"
                     /note="TCL1/MTCP1 family; pfam01840"
                     /db_xref="CDD:460358"
     CDS             1..131
                     /gene="TCL1B"
                     /coded_by="XM_061159124.1:1..396"
                     /db_xref="GeneID:133068055"
ORIGIN      
        1 meaeasppvg sppcflwfqr pgvykdekgr iwvavalqin pslrargsga pesthevtit
       61 vhlwqlpsqm prppsclfvs glpmkwelyp grryqgtdsr rweivdhgqa npagpvssar
      121 ilmhlliglh t
//
LOCUS       XP_061015108             251 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C14orf132 homolog [Dama dama].
ACCESSION   XP_061015108
VERSION     XP_061015108.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159125.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 42% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..251
                     /product="uncharacterized protein C14orf132 homolog"
                     /calculated_mol_wt=26196
     Region          <6..125
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     CDS             1..251
                     /gene="C13H14orf132"
                     /coded_by="XM_061159125.1:1..756"
                     /db_xref="GeneID:133068056"
ORIGIN      
        1 mkallaapga wapqhgagrp rrwtrfrtgs ckdqtrdlgp qqvpasttph pspqgsewer
       61 srgsaeprpr grgwersrgg assspaqsep rpaprlqaph ppsasrepra gagrragsvp
      121 aatascrgcr avsgtparcv afsgqlcgrl dsggsdseds saggsrdtmd lsfmaaqlpm
      181 mggafmdspn edfsteyslf nsspnvhaas ngqgqpeepp rssndavllw iaiiatlgni
      241 vvvgvvyaft f
//
LOCUS       XP_061015109             331 aa            linear   MAM 02-DEC-2023
DEFINITION  WAS/WASL-interacting protein family member 2-like [Dama dama].
ACCESSION   XP_061015109
VERSION     XP_061015109.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159126.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 37% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..331
                     /product="WAS/WASL-interacting protein family member
                     2-like"
                     /calculated_mol_wt=34820
     CDS             1..331
                     /gene="LOC133068057"
                     /coded_by="XM_061159126.1:1..996"
                     /db_xref="GeneID:133068057"
ORIGIN      
        1 mckrkttpps glvsvlldlp rdryprptpe gdhfawspsi gdgivpetcw appppdasca
       61 pgscgpdegg grggrgwsvf kedtfrlipc lqgppvddel mprclpltsv lcrsppqpil
      121 vkrrsvnvfp nrlvdhvplt plitcltllv ysstalrtsp vrralgapap ppvkpiyirc
      181 lpsspsvspp thrfvvssgp lnstsskacp skrrvpaspr lgspvpappd lvaclgaapg
      241 pvslhtsshp crsqepppst enqtagaqaa pdrerldggg ggapleqhaf rrvtrrlapt
      301 pscdtaawig pkpssgilrg pgprtrhpst l
//
LOCUS       XP_061015110            1340 aa            linear   MAM 02-DEC-2023
DEFINITION  retrotransposon-like protein 1 [Dama dama].
ACCESSION   XP_061015110
VERSION     XP_061015110.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159127.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1340
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1340
                     /product="retrotransposon-like protein 1"
                     /calculated_mol_wt=152932
     Region          <186..264
                     /region_name="Retrotrans_gag"
                     /note="Retrotransposon gag protein; cl46289"
                     /db_xref="CDD:480629"
     Region          226..318
                     /region_name="Retrotrans_gag"
                     /note="Retrotransposon gag protein; pfam03732"
                     /db_xref="CDD:367628"
     Region          407..496
                     /region_name="retropepsin_like"
                     /note="Retropepsins; pepsin-like aspartate proteases;
                     cd00303"
                     /db_xref="CDD:133136"
     Site            order(416,418,420,445..447,489)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133136"
     Site            416..418
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133136"
     Site            416
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133136"
     Site            order(445..448,452..454,459)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133136"
     Region          <635..768
                     /region_name="RT_LTR"
                     /note="Reverse transcriptases (RTs) from retrotransposons
                     and retroviruses which have long terminal repeats (LTRs)
                     in their DNA copies but not in their RNA template. RT
                     catalyzes DNA replication from an RNA template, and is
                     responsible for the replication of...; cd01647"
                     /db_xref="CDD:238825"
     Site            order(653..658,689..690,717,719..720,764..765)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238825"
     Site            order(653..658,689,719)
                     /site_type="other"
                     /note="putative NTP binding site [chemical binding]"
                     /db_xref="CDD:238825"
     Site            690
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:238825"
     Region          831..928
                     /region_name="RT_RNaseH_2"
                     /note="RNase H-like domain found in reverse transcriptase;
                     pfam17919"
                     /db_xref="CDD:465567"
     CDS             1..1340
                     /gene="RTL1"
                     /coded_by="XM_061159127.1:1..4023"
                     /db_xref="GeneID:133068058"
ORIGIN      
        1 miepsedsfe tmmerknpss kqmessegss nttvetppgy gaeaaglagg laqemeeqsi
       61 dlrqdmeeps sgphreikdp pndllqdlee scegshleeg gpfsgapggm eeaednpwes
      121 eedqdyytdl aeseedespe epdsstvevm gmvksiisly frtqdlreqq rvaeeilmna
      181 isdgqlpnps rfsgdrreyh efivlcqlil qsyprvfcnd rlrvgyvish lsgmamewas
      241 dlverdssvi dnfpafleam ndtfeyrqal rvaedailhl rqgdrpaiey inefqslipt
      301 lgwpdevlqa hlcqglkeei rhylfripqp nslknlialv lqiedklaer ravfrlspev
      361 rprhltwlds pgperwtvnt wlpnqfhpdi rhnhlfllfl vrvnpyhsva vqalvdsear
      421 snymdeefaq ehhvelyqkp yaesaqfads slisnepvwl yteplvclhq nhqeslefdi
      481 vasstfsiil gikwlqlhip eidwmkgrct fhspyclknc frppppcial edhaisllpg
      541 lphqysdlad vfnpkeadee tsdqpssdgs ddlsesepse lqqagdsdqs eetfydctsn
      601 apwepvsagm qekakqqefw dlqdmltgrh dyvqmipemf dqlhgatwft klelrgtive
      661 esmnihkted vwkvafglel qnmtsyqtfp icadpiisqg vihfilkdmi gifvvsygqd
      721 vlvysmsqee hyqhvrqvlv rfryhhvycs lqrsqfhqht aeflgfvvtp kgvklnksiv
      781 stitgyptpg srkslrnlme fafpyrhfve rfatitepli rrlradlpfs wgdeeqeafr
      841 glkrafhhap llyhpkpqnq fylrtgvtkt tlyasliqed krtgkkvsca fysrnispte
      901 veaspvemki lpiraafmvw crylenteep imillnkedl aslnndrltv llpghwvfff
      961 ahfyfdvkem psfddvqplp rrqrlrrqra lqrratpttr ramfvteqap trdqspesed
     1021 keeskdalhp depdrqnlqq rflalvpvdq ifnsvlahfs maqiravmlh fyrgllfwkn
     1081 hlamaallvm lqfrrrlall paptagparp prqrslslfl dtslltssgi atavtqlftq
     1141 mpppvganal paeelaelfl gpspwqihal rglritprfw qtlcqffgir gpalagtrth
     1201 pgsyhflaph vegdeyvvsr ealqddlqrl hqsglhdglq dtsqdaqddv wetlspaaga
     1261 rrplqhlpte aevlarlsyi rstqrgstvi hweltarali nflmtvytqa lpppgeaspp
     1321 tegatleelp sdsdedadld
//
LOCUS       XP_061015111             416 aa            linear   MAM 02-DEC-2023
DEFINITION  fibril-forming collagen alpha chain-like [Dama dama].
ACCESSION   XP_061015111
VERSION     XP_061015111.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159128.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 9% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..416
                     /product="fibril-forming collagen alpha chain-like"
                     /calculated_mol_wt=43359
     CDS             1..416
                     /gene="LOC133068059"
                     /coded_by="XM_061159128.1:1..1251"
                     /db_xref="GeneID:133068059"
ORIGIN      
        1 mtrcarrgag dlglrgaeyl dlggprsrep grlsdldagg vqpsrdalav agtrlgrrwq
       61 srntappppa sralatrpgt grltssrdgh naripgrggs slirirrghr srrrrrrgnk
      121 sravnlghra ptqdpagpsg rrercasrae pgdvsaawgg gvgccrarel ptqrkgrfip
      181 vpallsaprh cpsapwvgvf rtvscsggsa svlgpagstp plgipghqti rlpqrlvqva
      241 ssqlpvscpd lpclrpsltw dledpgrgpw gtsvgawavp tpvgwpptgs flpalrqlqk
      301 gagrgkkgkd kvawvpwvsr snvdggrgrg rrlgppgrag rtslspgdgd glclppgnaa
      361 ascqrrmlrl pvgwsgppcr raprgfsgga gaartpgqac rgaagvfrpc acpasr
//
LOCUS       XP_061015112             182 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein uL6-like [Dama dama].
ACCESSION   XP_061015112
VERSION     XP_061015112.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159129.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..182
                     /product="large ribosomal subunit protein uL6-like"
                     /calculated_mol_wt=20273
     Region          9..181
                     /region_name="PTZ00027"
                     /note="60S ribosomal protein L6; Provisional"
                     /db_xref="CDD:240234"
     CDS             1..182
                     /gene="LOC133068060"
                     /coded_by="XM_061159129.1:1..549"
                     /db_xref="GeneID:133068060"
ORIGIN      
        1 magilpillt vvsdsaltlk grtatgkgpr gtrwrdfnhi nvafsllgek kkrlqvdkww
       61 gnkkelvtvc ticsrvqnmi ksvtlgfcyk mrsvcahfpi dvaiqengsl aeienfgsek
      121 yihrvqmrpd iaylvpqaqe delslegnhm elvsdsashk nirkvldgiy vsekgtvqqa
      181 de
//
LOCUS       XP_061015113             166 aa            linear   MAM 02-DEC-2023
DEFINITION  LBH domain-containing protein 2 [Dama dama].
ACCESSION   XP_061015113
VERSION     XP_061015113.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159130.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 27% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..166
                     /product="LBH domain-containing protein 2"
                     /calculated_mol_wt=16059
     Region          <96..>120
                     /region_name="Lbh"
                     /note="Cardiac transcription factor regulator,
                     Developmental protein; pfam15317"
                     /db_xref="CDD:434627"
     CDS             1..166
                     /gene="LBHD2"
                     /coded_by="XM_061159130.1:1..501"
                     /db_xref="GeneID:133068063"
ORIGIN      
        1 mlpgtvsvde gpdqgapvgg ertggrrgas qggqtasgga gsagprehpl apdggrsmsg
       61 pqpaaapelg pdreaggpsa eamvgarekg prlgqrlpsi vvepselgav esgelrwppe
      121 gaqrgsarsq aaaapsprpp gapgeapada ddarassagq apcarr
//
LOCUS       XP_061015115             401 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133068065 [Dama dama].
ACCESSION   XP_061015115
VERSION     XP_061015115.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159132.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..401
                     /product="uncharacterized protein LOC133068065"
                     /calculated_mol_wt=43279
     Region          <4..376
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..401
                     /gene="LOC133068065"
                     /coded_by="XM_061159132.1:1..1206"
                     /db_xref="GeneID:133068065"
ORIGIN      
        1 mvhassslrt tprlhtapph rastprlhta pphlqlhtap phrastahlh tapphrastp
       61 apphrastpa pphrtstahl htapphrast papphrtsta hlhtvpphra stpapphrts
      121 tphlhtcsst phlhtappqh tstprlhtap phrastphlh stpphrastp clhtapphrt
      181 stphlhtapp hrastpapph rastprlhtc tstphlhtap phrastprlh stpphrastp
      241 rlhtappqht stprlhtapp hlhlhtappq htstprlhta pphpastprl htapphrast
      301 phlhstpphr astahlhtap phhastarlh tappqhtstp rlhtapphra stprlhtcss
      361 tprlhttpph lqlhttpphh tstphlhtcs stpaalehmf q
//
LOCUS       XP_061015116             743 aa            linear   MAM 02-DEC-2023
DEFINITION  60 kDa lysophospholipase [Dama dama].
ACCESSION   XP_061015116
VERSION     XP_061015116.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159133.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 24% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..743
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..743
                     /product="60 kDa lysophospholipase"
                     /calculated_mol_wt=77991
     Region          9..361
                     /region_name="L-asparaginase_like"
                     /note="Bacterial L-asparaginases and related enzymes;
                     cl00216"
                     /db_xref="CDD:469665"
     Site            order(18..19,85..86,115..117,142,188)
                     /site_type="active"
                     /db_xref="CDD:199207"
     Site            order(19,28..30,81,84..90,92..93,117..118,121,143..144,
                     188..193,237..247,249..250,253,256..257,266,268..270,274,
                     298,301..304,308,327,331,335)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:199207"
     Region          <381..553
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(408..410,412..413,417,420,429,431,433,437..438,
                     441..443,445..446,450,453,462,464,466,470..471,474..476,
                     478..479,483,486)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          431..462
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          464..489
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..743
                     /gene="ASPG"
                     /coded_by="XM_061159133.1:1..2232"
                     /db_xref="GeneID:133068066"
ORIGIN      
        1 maraagperr llavytggti gmrsergvlv pgrdlaavlr mlpmfhdeeh arargfpedt
       61 lvlppaspdq rvvyrvlesq plfdssdmti tewvqiaqti eshygqydgf vvihgtdtma
      121 faasvlsfvl enlqktvilt gaqvpihalw ndgrenllga lllagqyvip evclffqnql
      181 frgnrvtkvd arrfaafcsp nlpplatvga dvtinqelvr rvrgqgrlvv hssmerdvgl
      241 lrlypgipas lvraflqppm kgvvmetfgs gngptkpdll qelraaaerg lvivncthcl
      301 qgavtsdyga gmalsgagtv sgfdmtseaa laklsyvlgl pglsldgrke llardlrgem
      361 tppavdeprp slrggvlgrg vaqllslkqe adevwdalvp slacaaaytg elealqvlve
      421 lgsdrsledf sgqtplhaaa wagqagavtm llqrgldvna rdkgglspll lavrgrhrgv
      481 igllraagac lssqeledsg telcrlasra dcegllvwgq agadprqpgy dgrsalqvae
      541 aagnlevval lqnlwggagd qapgaatpqs spgglamark ppslegpcwa rpartpaptg
      601 pgglgsqlap rpqgvswpsg slslwkcclg snlklsccgv scsfllrpag gtvppgsprt
      661 lsvlctpcpc plpptllrep lpilcpgrsl kdvagesghk vplrtvppta wlqgllplvg
      721 plasltpgpp rggregglgr ssp
//
LOCUS       XP_061015117            4817 aa            linear   MAM 02-DEC-2023
DEFINITION  protein AHNAK2 [Dama dama].
ACCESSION   XP_061015117
VERSION     XP_061015117.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159134.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4817
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..4817
                     /product="protein AHNAK2"
                     /calculated_mol_wt=502664
     Region          138..204
                     /region_name="PDZ_canonical"
                     /note="canonical PDZ domain; cl49608"
                     /db_xref="CDD:483948"
     Site            order(138..142,152,155,184,188,191..192)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467153"
     Region          <303..423
                     /region_name="SepH"
                     /note="septation protein SepH; NF040712"
                     /db_xref="CDD:468676"
     CDS             1..4817
                     /gene="AHNAK2"
                     /coded_by="XM_061159134.1:1..14454"
                     /db_xref="GeneID:133068067"
ORIGIN      
        1 mglaqlvgpg geepggrtqg agsldrhfgq swedvglvsg rqlqpgepda esedehsvta
       61 gpgpelirpr pqgsspvyec vtegagfrlp edaprrrrsw wkrdsgdsrt lsrmshlest
      121 qdgtevtlkt eveagasgys vtgggdqgif vkqvlkdssa akifslregd qllsatiffd
      181 nikyedalki lqysepykvq fklrrklpas gteegaagsa epgprvgeeq dqdvadgcte
      241 tprktpqgdg dqqrllptpr egrgrraqre rlswpkfqal kskrgprrsh ssseayergr
      301 gpdlsptstd teaplpteee pgsqwrrrfp slrfrmgpgk gpsgrgdrsg agpaelleea
      361 gpseaeqeai gtagrgeked vraglpeeae aptepalpge gptgdgagpa prlrrkkaqa
      421 tapeetpaeg qteagtalaq ttegatgdtq gplvgtarls lqgsadqgsy rngqpefrir
      481 itslktpkfr vaketvpeya egtapvrwgp wwtqvsadda ramvedkgdt dsetmrgppt
      541 eqtkpegege eeaaeetaee srerdqesee megktrilkf klpsfgwspa kesrgvtttl
      601 iqetekqkqt tettgttete rkgkdgqdrd srfkmpkfkm psfgvsapsk aieaavdvsl
      661 pkaqaevtap svqadiktse vrvelpsael evkaaevgvk lpeahlpeae lkegaagvgi
      721 kahlpkvqmp svklpkvdik apqvdikgpk ldlkgakaev aapdvevslp svevdtqapg
      781 aklegdlalg dkevaardsk fkmpkfkmps fgvsapskai eaavdvslpk aqaevtapsv
      841 qadvktsevr velpsaelev kaaevgvklp eahlpeaelk egaagvgika hlpkvqmpsv
      901 klpkvdikap qvdikgpkld lkgakaevaa pdvevslpsv evdtqapgak legdltlgdk
      961 evaardskfk mpkfkmpsfg vsapskaiea avdvslpkaq aevtapsvqa dvktsevrve
     1021 lpsaelevka aevgvklpea hlpeaelkeg aagvgikahl pkvqmpsvkl pkvdikapqv
     1081 dikgpkldlk gakaevaapd vevslpsvev dtqapgakle gdlalgdkev aardskfkmp
     1141 kfkmpsfgvs apskaieaav dvslpkaqae vtapsvqadv ktsevrvelp saelevkaae
     1201 vgvklpeahl peaelkegaa gvgikahlpk vqmpsvklpk vdikapqvdi kgpkldlkga
     1261 kaevaapdve vslpsvevdt qapgaklegd lalgdkevaa rdskfkmpkf kmpsfgvsap
     1321 skaieaavdv slpkaqaevt apsvqadvkt sevrvelpsa elevkaaevg vklpeahlpe
     1381 aelkegaagv gikahlpkvq mpsvklpkvd ikapqvdikg pkldlkgaka evaapdvevs
     1441 lpsvevdtqa pgaklegdla lgdkevaard skfkmpkfkm psfgvsapsk aieaavdvsl
     1501 pkaqaevtap svqadvktse vrvelpsael evkaaevgvk lpeahlpeae lkegaagvgi
     1561 kahlpkvqmp svklpkvdik apqvdikgpk ldlkgakaev aapdvevslp svevdtqapg
     1621 aklegdlalg dkevaardsk fkmpkfkmps fgvsapskai eaavdvslpk aqaevtapsv
     1681 qadvktsevr velpsaelev kaaevgvklp eahlpeaelk egaagvgika hlpkvqmpsv
     1741 klpkvdikap qvdikgpkld lkgakaevaa pdvevslpsv evdtqapgak legdlalgdk
     1801 evaardskfk mpkfkmpsfg vsapskaiea avdvslpkaq aevtapsvqa dvktsevrve
     1861 lpsaelevka aevgvklpea hlpeaelkeg aagvgikahl pkvqmpsvkl pkvdikgpkl
     1921 dlkgakaeva apdvevslps vevdtqapga klegdlalgd kevaardskf kmpkfkmpsf
     1981 gvsapskaie aavdvslpka qaevtapsvq advktsevrv elpsaelevk aaevgvklpe
     2041 ahlpeaelke gaagvgikah lpkvqmpsvk lpkvdikapq vdikgpkldl kgakaevaap
     2101 dvevslpsve vdtqapgakl egdlalgdke vaardskfkm pkfkmpsfgv sapskaieaa
     2161 vdvslpkaqa evtapsvqad vrtsevrvel psaelevkaa evgvklpeah lpeaelkega
     2221 agagikahlp kvqmpsvklp kvdikapqvd ikgpkldlkg akaevaapdv evslpsvevd
     2281 tqapgakleg dlalgdkeva ardskfkmpk fkmpsfgvsa pskaieaavd vslpkaqaev
     2341 tapsvqadvr tsevrvelps aelevkaaev gvklpeahlp eaelkegaag vgikahlpkv
     2401 qmpsvklpkv dikapqvdik gpkldlkgak aevaapdvev slpsvevdtq apgaklegdl
     2461 algdkevaar dskfkmpkfk mpsfgvsaps kaieaavdvs lpkaqaevta psvqadvrts
     2521 evrvelpsae levkaaevgv klpeahlpea elkegaagvg ikahlpkvqm psvklpkvdi
     2581 kapqvdikgp kldlkgakae vaapdvevsl psvevdtqap gaklegdlal gdkevaards
     2641 kfkmpkfkmp sfgvsapska ieaavdvslp kaqaevtaps vqadvrtsev rvelpsaele
     2701 vkaaevgvkl peahlpeael kegaagvgik ahlpkvqmps vklpkvdika pqvdikgpkl
     2761 dlkgakaeva apdvevslps vevdtqapga klegdlalgd kevaardskf kmpkfkmpsf
     2821 gvsapskaie aavdvslpka qaevtapsvq advrtsevrv elpsaelevk aaevgvklpe
     2881 ahlpeaelke gaagvgikah lpkvqmpsvk lpkvdikapq vdikgpkldl kgakaevaap
     2941 dvevslpsve vdtqapgakl egdlalgdke vaardskfkm pkfkmpsfgv sapskaieaa
     3001 vdvslpkaqa evtapsvqad vktsevrvel psaelevkaa evgvklpeah lpeaelkega
     3061 agvgikahlp kvqmpsvklp kvdikapqvd ikgpkldlkg akaevaapdv evslpsvevd
     3121 tqapgakleg dlalgdkeva ardskfkmpk fkmpsfgvsa pskaieaavd vslpkaqaev
     3181 tapsvqadvk tsevrvelps aelevkaaev gvklpeahlp eaelkegaag vgikahlpkv
     3241 qmpsvklpkv dikapqvdik gpkldlkgak aevaapdvev slpsvevdtq apgaklegdl
     3301 algdkevatr dskfkmpkfk mpsfgvsaps kaieaavdvs lpkaqaevta psvqavvrts
     3361 evrvelpsae levkaaevgv klpeahlpea elkegaagvg ikahlpkvqm psvklpkvdi
     3421 kapqvdikgp kldlkgakae vaapdvevsl psvevdtqap gaklegdlal gdkevaards
     3481 kfkmpkfkmp sfgvsapska ieaavdvslp kaqaevtaps vqadvktsev rvelpsaele
     3541 vkaaevgvkl peahlpeael kegaagvgik ahlpkvqmps vklpkvdika pqvdikgpkl
     3601 dlkgakaeva apdvevslps vevdtqapga klegdlalgd kevaardskf kmpkfkmpsf
     3661 gvsapskaie aavdvslpka qaevtapsvq advktsevrv elpsaelevk aaevgvklpe
     3721 ahlpeaelke gaagvgikah lpkvqmpsvk lpkvdikapq vdikgpkldl kgakaevaap
     3781 dvevslpsve vdtqapgakl egdlalgdke vaardskfkm pkfkmpsfgv sapskaieaa
     3841 vdvslpkaqa evtapsvqad vktsevrvel psaelevkaa evgvklpeah lpeaklkega
     3901 agvgikahlp kvqmpsvklp kvdikapqvd ikgpkldlkg akaevaapdv evslpsvevd
     3961 tqapgaklqv draprekdvs ardhtltted dvkihvrksh fkfpklfsss gksfisspvi
     4021 dgdphvsllp sasgvdstsp dvsshkpslp rphlgwpgvs sgsldvsrsh vesssislep
     4081 vtlikyqvta pdaaqfpsei psysqedres paalspdehv pcppdrpasp pdplflasyg
     4141 rvtfpkfhrp kfgfsspeag gpsveagaae tspalcppse vqgldsahgl plgdghqgha
     4201 pgdvtasqph gegtaqsagd pfqqscraag adapteestp aqggwfrmpa vhlpsirrpa
     4261 rakgvpgvqs pppaahspge egptpvkaqg ppglevevpe pleaaeksas cvgvleinld
     4321 grgptphppp pgaspvglst skarvrpgeg slplrmpsga lletkappag pagldlagge
     4381 greekwssqp egpvklkvsr tdgpsqvsvv svgqpwegsv ltvrlprlsm prfafpdpgs
     4441 eadifiptvq evqcagsslg dalrtespga wgasilkaga gtpeeqpvaf dlspeasrvr
     4501 vhihgaqgeg pgvgvhgvvt aepadlsgpe avstqivres eipaseiqta sygfsllkvk
     4561 isepptqgrv qdsrptvgll eapeeagpra dpvsadlqpd tgepfevias svsvpggpal
     4621 tadlrsghag vescsdeepa eilefppeed geeaaaglae rdqalkekpe gkrssglfrf
     4681 wlpsigfsss seetradskd eahgpapiqt ppssqpeaep pkktekagwf rfpklgfsss
     4741 ptkkskssed eaasaeqklq eeavtffdar esfspedkee gvpgagamvt startelill
     4801 epdpgapdep apvpaaq
//
LOCUS       XP_061015118             398 aa            linear   MAM 02-DEC-2023
DEFINITION  cell division cycle-associated protein 4 [Dama dama].
ACCESSION   XP_061015118
VERSION     XP_061015118.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159135.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 28% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..398
                     /product="cell division cycle-associated protein 4"
                     /calculated_mol_wt=41115
     Region          201..236
                     /region_name="SERTA"
                     /note="SERTA motif; pfam06031"
                     /db_xref="CDD:461806"
     CDS             1..398
                     /gene="CDCA4"
                     /coded_by="XM_061159135.1:1..1197"
                     /db_xref="GeneID:133068068"
ORIGIN      
        1 mslttckaai aleacvgrap iqrelalpvr rtaqahwgra rkpgsrpglg glgrgpngqr
       61 gragtrapgp arglnlrprp rprpisgrgg rlhgdplwal rgpapgpapp gssslgggag
      121 caggavaggq erllsfnltg esfkeekplt wflhvpglaa gnpprcllal dleegkmfar
      181 glkrkcaeee apadplqrqs lldmslvklq lchmlaepnl crsvliantv rqiqgemtqd
      241 gswrppgpqt pgraprdrlv stellcrsar agpppapgpa dlasalqaap aaqapgvvpg
      301 gpwdragpge srggfprsld qvfetlenhg pgaveelfsd vdasyydlda vltgmvggak
      361 sgpeglesfa saaapppgag ckadlgeldh vveilvet
//
LOCUS       XP_061015119             672 aa            linear   MAM 02-DEC-2023
DEFINITION  basic proline-rich protein-like [Dama dama].
ACCESSION   XP_061015119
VERSION     XP_061015119.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159136.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..672
                     /product="basic proline-rich protein-like"
                     /calculated_mol_wt=67141
     Region          <283..597
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..672
                     /gene="LOC133068069"
                     /coded_by="XM_061159136.1:1..2019"
                     /db_xref="GeneID:133068069"
ORIGIN      
        1 mstvpsgwcl srprtgvgal lqagvppppp shspqalrtg gpsqassprp sptgslgsgk
       61 gllslggspg satpgaergp tppsagqlsa lssgttqrps lpkagvswge gsgawvpvcd
      121 pggrfgtgrp glakrvggal paalrrllad igpasaglar gspnrgrlaa qspcpegpvr
      181 aeggggevqv rrlacpaplr avcvttsnpa tpqhagrwdt kpdplprvrg ihrfplretg
      241 errpgargga grpaagapgs glaqppprep vprrpappal psprldpepg ptvpssptrs
      301 apgpaaaprr lhplpppraa papsdpgrvp vgagahppsp rgperagacr grwqssagag
      361 lgrretsvca arrgsrqpps epgrggwvsw vpaptrpggg rdpgfpgstp sralaalavv
      421 ssictvlceg warspkrmki pgargrpgpv aslpqsessc agpprsfpgg aatlgaqklg
      481 esggspapgr vpsgprpaps giqlsppnsr gadgaagaak psalthapgi pgepapsatp
      541 ppwagpsprg qgeagcptgw ggrrppppha aappgsstcc gpaalrvrep pttpltkerf
      601 atwesqlvww aqllglaaeg agatgyklrg vpalwaqrpa qvrleaatpa aqwlctqglc
      661 pasreqtllg nf
//
LOCUS       XP_061015120             589 aa            linear   MAM 02-DEC-2023
DEFINITION  basic proline-rich protein-like [Dama dama].
ACCESSION   XP_061015120
VERSION     XP_061015120.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159137.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..589
                     /product="basic proline-rich protein-like"
                     /calculated_mol_wt=60304
     Region          <72..395
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..589
                     /gene="LOC133068070"
                     /coded_by="XM_061159137.1:1..1770"
                     /db_xref="GeneID:133068070"
ORIGIN      
        1 mptlgyllcc pppcagpgcv ltcppsplhp lirslrtvaa lrpeatwdpv ptsmphrglh
       61 khgqvltghm vfrepsrlgh rppacvssrp pslrpapsll lqmqevggpa asdsrplsah
      121 aascgprslh prrrdtsssv threpalgtp gptppyscpq psphlavpva skvgsqgcra
      181 tglstsscsp rstdtttsgg pelspplpvq spsprlaahl pglgpimacp appssglsvd
      241 pssssgptpt plpswglsgd astpqnlslt fpeppdctsg npdsaahget pppspqctpc
      301 pvrlgtpvwv rtgtevgawg pfpqelslss rpttdpqsfg kvllvwpqlt qdlppwerpp
      361 scrlsstaae aggrahssqa paepcmgtfp gptkagtwqt mslftmtsgc pcevwqpawh
      421 rphcglplas pgpplwplpp rdprgpwcdg flssallaag gqsalplppp tapgkglggq
      481 glrpaalepi pwtpplasla gaqaspgtgr psrhvgqdda gkhqparaaa acpratptwk
      541 ppppggngps gppagqcaha egqlscgcgh gkpgdcgedp wagaqnprq
//
LOCUS       XP_061015121             661 aa            linear   MAM 02-DEC-2023
DEFINITION  basic proline-rich protein-like [Dama dama].
ACCESSION   XP_061015121
VERSION     XP_061015121.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159138.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..661
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..661
                     /product="basic proline-rich protein-like"
                     /calculated_mol_wt=67663
     Region          <7..391
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..661
                     /gene="LOC133068072"
                     /coded_by="XM_061159138.1:1..1986"
                     /db_xref="GeneID:133068072"
ORIGIN      
        1 mvgrlgpdlg argptrggtr pcggggaqps gmarglssrp egaaapgrra rnlgrseqtg
       61 sraspegvls apraglcrtr ahegpragpr ppggataape agaafppkpr rgedgsgcsp
      121 praaptargf vppapaaraa rpgsrpaavp araaslaaph ragrgpapsa rretkargag
      181 algrfsdpgl rviqapddsi pkgtwpilfr partvapyca gsnscplhsp spmparpahh
      241 egvgpsrslp pslggnlrkp lllppawats pyapltplal avtaphqava plapelcllp
      301 cldkdikfnv trdcgasarp alvtpqpprp geegplptfp lpralirpgp gpqgpdrlcp
      361 drrshmepqp lprkagaraw ppsphsgras pwgpapgpaa pavlspargl llgcpdltds
      421 gasgrlaarl fpgalhapls ahkewqgerr rrpsrspigr rpvkglgrsw qaasrllgpl
      481 rplpptgpgp gspaarphpc saapapcrpc gralgahqga lparpartyp pparccarga
      541 wphgaclrar rgrallgsaa ppararpapg prprptlpaa rarrtrtgvp appppqrrrl
      601 pgrqrceaaa pgtaalgsrs pqgsmrcpgs lstgvtrqpe rdsgalkfcg sphpgrrpgl
      661 l
//
LOCUS       XP_061015124             331 aa            linear   MAM 02-DEC-2023
DEFINITION  iron-sulfur protein NUBPL isoform X1 [Dama dama].
ACCESSION   XP_061015124
VERSION     XP_061015124.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159141.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..331
                     /product="iron-sulfur protein NUBPL isoform X1"
                     /calculated_mol_wt=35557
     Region          65..311
                     /region_name="ParA"
                     /note="NUBPL iron-transfer P-loop NTPase; pfam10609"
                     /db_xref="CDD:431392"
     Site            order(76..83,211,213,238..239,275..277,280..281)
                     /site_type="active"
                     /db_xref="CDD:349757"
     Site            order(76..78,109..110,112,115..116,157..158,188,190,193,
                     217,220,276,278..279,281)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:349757"
     CDS             1..331
                     /gene="NUBPL"
                     /coded_by="XM_061159141.1:30..1025"
                     /db_xref="GeneID:133068089"
ORIGIN      
        1 mgvwlrllvs sgvslrrcgg acvplggsrl licrrqfsga esetlkqrrs qimsrglpkq
       61 kpiegvkqvi vvasgkggvg ksttavnlal alaandsska vglldvdvyg psipkmmnlk
      121 gnpelsqsnl mrpllnygia cmsmgflvee taplvwrglm vmsaiekllr qvdwgqldyl
      181 vvdmppgtgd vqlsvsqnip isgavivstp qdialmdahk gaemfrkvhv pvlglvqnms
      241 vfqcpkckhk thifgadgar rlaqtldldi lgdiplhlni reasdtgqpi vfsqpesdea
      301 kaylriatev vrrlppppes fpkclgnlpg h
//
LOCUS       XP_061015125             311 aa            linear   MAM 02-DEC-2023
DEFINITION  iron-sulfur protein NUBPL isoform X2 [Dama dama].
ACCESSION   XP_061015125
VERSION     XP_061015125.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159142.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..311
                     /product="iron-sulfur protein NUBPL isoform X2"
                     /calculated_mol_wt=33403
     Region          65..304
                     /region_name="ParA"
                     /note="NUBPL iron-transfer P-loop NTPase; pfam10609"
                     /db_xref="CDD:431392"
     Site            order(76..83,211,213,238..239,275..277,280..281)
                     /site_type="active"
                     /db_xref="CDD:349757"
     Site            order(76..78,109..110,112,115..116,157..158,188,190,193,
                     217,220,276,278..279,281)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:349757"
     CDS             1..311
                     /gene="NUBPL"
                     /coded_by="XM_061159142.1:30..965"
                     /db_xref="GeneID:133068089"
ORIGIN      
        1 mgvwlrllvs sgvslrrcgg acvplggsrl licrrqfsga esetlkqrrs qimsrglpkq
       61 kpiegvkqvi vvasgkggvg ksttavnlal alaandsska vglldvdvyg psipkmmnlk
      121 gnpelsqsnl mrpllnygia cmsmgflvee taplvwrglm vmsaiekllr qvdwgqldyl
      181 vvdmppgtgd vqlsvsqnip isgavivstp qdialmdahk gaemfrkvhv pvlglvqnms
      241 vfqcpkckhk thifgadgar rlaqtldldi lgdiplhlni reasdtgqpi vfsqpesdek
      301 vtfqivtpqi t
//
LOCUS       XP_061015126            1503 aa            linear   MAM 02-DEC-2023
DEFINITION  rho GTPase-activating protein 5 isoform X1 [Dama dama].
ACCESSION   XP_061015126
VERSION     XP_061015126.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159143.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1503
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1503
                     /product="rho GTPase-activating protein 5 isoform X1"
                     /calculated_mol_wt=172173
     Region          31..246
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            order(31..36,94,199..200,202,228..230)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206648"
     Site            53..55
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            199..202
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            228..230
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     Region          260..338
                     /region_name="RhoGAP-FF1"
                     /note="p190-A and -B Rho GAPs FF domain; pfam16512"
                     /db_xref="CDD:465153"
     Region          368..420
                     /region_name="FF"
                     /note="Contains two conserved F residues; smart00441"
                     /db_xref="CDD:128718"
     Region          429..481
                     /region_name="FF"
                     /note="Contains two conserved F residues; smart00441"
                     /db_xref="CDD:128718"
     Region          484..533
                     /region_name="FF"
                     /note="Contains two conserved F residues; smart00441"
                     /db_xref="CDD:128718"
     Region          556..1265
                     /region_name="RhoGAP_pG1_pG2"
                     /note="p190RhoGAP, pG1 and pG2 domains; pfam19518"
                     /db_xref="CDD:466111"
     Region          1261..1445
                     /region_name="RhoGAP_p190"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain of p190-like proteins. p190, also
                     named RhoGAP5, plays a role in neuritogenesis and axon
                     branch stability. p190 shows a preference for Rho, over
                     Rac and Cdc42, and consists of an...; cd04373"
                     /db_xref="CDD:239838"
     Site            order(1298,1336,1340,1409,1412..1413,1436)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239838"
     Site            1298
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239838"
     CDS             1..1503
                     /gene="ARHGAP5"
                     /coded_by="XM_061159143.1:344..4855"
                     /db_xref="GeneID:133068090"
ORIGIN      
        1 mmaknkeprp psytisvvgl sgtekdkgnc gvgksclcnr fvrskadeyy pehtsvlsti
       61 dfggrvvnnd hflywgditq sgedgvecki hvieqtefid dqtflphrst nlqpyikraa
      121 asklqsaekl myictdqlgl eqdfeqkqmp egklnvdgfl lcidvsqgcn rkfddqlkfv
      181 nnlfvqlsks kkpviiaatk cdecvdhylr evqafasnkk nllvvetsar fnvnietcft
      241 alvqmldktr gkpkiipyld ayktqrqlvv tatdkfeklv qtvrdyhatw ktvsnklknh
      301 pdyeeyihle gtrkarntfs khieqlkqeh irkrreeyin tlprafntll pnleeiehln
      361 wsealklmek radfqlcfvv lektpwdetd hidkindrri pfdllstlea ekvyqnhvqh
      421 lisekrrvem kekfkktlek iqfispgqpw eevmcfvmed eafkyitead skevygrhqr
      481 eivekakeef qemlfehsel fydldlnatp ssdkmseiht vlseepryka lqklapdres
      541 lllkhigfvy hptketclsg qnctdikveq llassllqld hgrlrlyhds tnidkvnlfi
      601 lgkdglaqel aneirtqstd deyaldgkiy eldlrpvdak spyflsqlwt aafkphgcfc
      661 vfnsieslnf igefigkirt easqirkdky manlpftlil anqrdsiskn lpilrhqgqq
      721 lanklqcpfv dvpggtyprk fnetqikqal rgvlesvkhn ldvvspvptn kdvseadlri
      781 vmcamcgdpf svdlilspfl dshscsaaqa gqnnslmldk iigekrrriq itilsyhssi
      841 gvrkdelvhg yilvysakrk asmgmlrafl sevqdtipvq lvavtdsqad ffeneaikel
      901 mtegehiate isakftalys lsqyhrqtev ftlffsdvle kknmiensyl sdstresthq
      961 sedvflpspr dcfpynnypd sdddteappp yspigddvql lptpsdrsry rldlegneyp
     1021 ihstpnchdh ernhkvpppi kpkpvapktn vkkldpnllk tieagigknp rkqtsrvpla
     1081 hpedmdpsdn ysepidtifk qkgysdeiyv vpddsqnrvi kirnsfvnnt qgdeengfsd
     1141 rtskshgerr pskykykskt lfskaksyyr rthsdasdde afttskakrk grhrgseedp
     1201 llspvetwkg gidnpaitsd qeldekkmkk kthkvkedkk qkkktknfnp ptrrnwesny
     1261 fgmplqdlvt aekpiplfve kcvefiedtg lcteglyrvs gnktdqdniq kqfdqdhnis
     1321 lvsmevtvna vagalkaffa dlpdplipys lhpelleaak ildkterlha lkeivkkfhp
     1381 vnydvfryii thlnrvsqhn kvnlmtadnl sicfwptlmr pdfenrefls ttkihqsvve
     1441 tfiqqcqfff yngeivetan tvappppsnp gqlaepmvpl qlppplqpql iqpqlqtdpl
     1501 gii
//
LOCUS       XP_061015127            1503 aa            linear   MAM 02-DEC-2023
DEFINITION  rho GTPase-activating protein 5 isoform X1 [Dama dama].
ACCESSION   XP_061015127
VERSION     XP_061015127.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159144.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1503
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1503
                     /product="rho GTPase-activating protein 5 isoform X1"
                     /calculated_mol_wt=172173
     Region          31..246
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            order(31..36,94,199..200,202,228..230)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206648"
     Site            53..55
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            199..202
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            228..230
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     Region          260..338
                     /region_name="RhoGAP-FF1"
                     /note="p190-A and -B Rho GAPs FF domain; pfam16512"
                     /db_xref="CDD:465153"
     Region          368..420
                     /region_name="FF"
                     /note="Contains two conserved F residues; smart00441"
                     /db_xref="CDD:128718"
     Region          429..481
                     /region_name="FF"
                     /note="Contains two conserved F residues; smart00441"
                     /db_xref="CDD:128718"
     Region          484..533
                     /region_name="FF"
                     /note="Contains two conserved F residues; smart00441"
                     /db_xref="CDD:128718"
     Region          556..1265
                     /region_name="RhoGAP_pG1_pG2"
                     /note="p190RhoGAP, pG1 and pG2 domains; pfam19518"
                     /db_xref="CDD:466111"
     Region          1261..1445
                     /region_name="RhoGAP_p190"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain of p190-like proteins. p190, also
                     named RhoGAP5, plays a role in neuritogenesis and axon
                     branch stability. p190 shows a preference for Rho, over
                     Rac and Cdc42, and consists of an...; cd04373"
                     /db_xref="CDD:239838"
     Site            order(1298,1336,1340,1409,1412..1413,1436)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239838"
     Site            1298
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239838"
     CDS             1..1503
                     /gene="ARHGAP5"
                     /coded_by="XM_061159144.1:418..4929"
                     /db_xref="GeneID:133068090"
ORIGIN      
        1 mmaknkeprp psytisvvgl sgtekdkgnc gvgksclcnr fvrskadeyy pehtsvlsti
       61 dfggrvvnnd hflywgditq sgedgvecki hvieqtefid dqtflphrst nlqpyikraa
      121 asklqsaekl myictdqlgl eqdfeqkqmp egklnvdgfl lcidvsqgcn rkfddqlkfv
      181 nnlfvqlsks kkpviiaatk cdecvdhylr evqafasnkk nllvvetsar fnvnietcft
      241 alvqmldktr gkpkiipyld ayktqrqlvv tatdkfeklv qtvrdyhatw ktvsnklknh
      301 pdyeeyihle gtrkarntfs khieqlkqeh irkrreeyin tlprafntll pnleeiehln
      361 wsealklmek radfqlcfvv lektpwdetd hidkindrri pfdllstlea ekvyqnhvqh
      421 lisekrrvem kekfkktlek iqfispgqpw eevmcfvmed eafkyitead skevygrhqr
      481 eivekakeef qemlfehsel fydldlnatp ssdkmseiht vlseepryka lqklapdres
      541 lllkhigfvy hptketclsg qnctdikveq llassllqld hgrlrlyhds tnidkvnlfi
      601 lgkdglaqel aneirtqstd deyaldgkiy eldlrpvdak spyflsqlwt aafkphgcfc
      661 vfnsieslnf igefigkirt easqirkdky manlpftlil anqrdsiskn lpilrhqgqq
      721 lanklqcpfv dvpggtyprk fnetqikqal rgvlesvkhn ldvvspvptn kdvseadlri
      781 vmcamcgdpf svdlilspfl dshscsaaqa gqnnslmldk iigekrrriq itilsyhssi
      841 gvrkdelvhg yilvysakrk asmgmlrafl sevqdtipvq lvavtdsqad ffeneaikel
      901 mtegehiate isakftalys lsqyhrqtev ftlffsdvle kknmiensyl sdstresthq
      961 sedvflpspr dcfpynnypd sdddteappp yspigddvql lptpsdrsry rldlegneyp
     1021 ihstpnchdh ernhkvpppi kpkpvapktn vkkldpnllk tieagigknp rkqtsrvpla
     1081 hpedmdpsdn ysepidtifk qkgysdeiyv vpddsqnrvi kirnsfvnnt qgdeengfsd
     1141 rtskshgerr pskykykskt lfskaksyyr rthsdasdde afttskakrk grhrgseedp
     1201 llspvetwkg gidnpaitsd qeldekkmkk kthkvkedkk qkkktknfnp ptrrnwesny
     1261 fgmplqdlvt aekpiplfve kcvefiedtg lcteglyrvs gnktdqdniq kqfdqdhnis
     1321 lvsmevtvna vagalkaffa dlpdplipys lhpelleaak ildkterlha lkeivkkfhp
     1381 vnydvfryii thlnrvsqhn kvnlmtadnl sicfwptlmr pdfenrefls ttkihqsvve
     1441 tfiqqcqfff yngeivetan tvappppsnp gqlaepmvpl qlppplqpql iqpqlqtdpl
     1501 gii
//
LOCUS       XP_061015128            1503 aa            linear   MAM 02-DEC-2023
DEFINITION  rho GTPase-activating protein 5 isoform X1 [Dama dama].
ACCESSION   XP_061015128
VERSION     XP_061015128.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159145.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1503
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1503
                     /product="rho GTPase-activating protein 5 isoform X1"
                     /calculated_mol_wt=172173
     Region          31..246
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            order(31..36,94,199..200,202,228..230)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206648"
     Site            53..55
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            199..202
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            228..230
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     Region          260..338
                     /region_name="RhoGAP-FF1"
                     /note="p190-A and -B Rho GAPs FF domain; pfam16512"
                     /db_xref="CDD:465153"
     Region          368..420
                     /region_name="FF"
                     /note="Contains two conserved F residues; smart00441"
                     /db_xref="CDD:128718"
     Region          429..481
                     /region_name="FF"
                     /note="Contains two conserved F residues; smart00441"
                     /db_xref="CDD:128718"
     Region          484..533
                     /region_name="FF"
                     /note="Contains two conserved F residues; smart00441"
                     /db_xref="CDD:128718"
     Region          556..1265
                     /region_name="RhoGAP_pG1_pG2"
                     /note="p190RhoGAP, pG1 and pG2 domains; pfam19518"
                     /db_xref="CDD:466111"
     Region          1261..1445
                     /region_name="RhoGAP_p190"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain of p190-like proteins. p190, also
                     named RhoGAP5, plays a role in neuritogenesis and axon
                     branch stability. p190 shows a preference for Rho, over
                     Rac and Cdc42, and consists of an...; cd04373"
                     /db_xref="CDD:239838"
     Site            order(1298,1336,1340,1409,1412..1413,1436)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239838"
     Site            1298
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239838"
     CDS             1..1503
                     /gene="ARHGAP5"
                     /coded_by="XM_061159145.1:244..4755"
                     /db_xref="GeneID:133068090"
ORIGIN      
        1 mmaknkeprp psytisvvgl sgtekdkgnc gvgksclcnr fvrskadeyy pehtsvlsti
       61 dfggrvvnnd hflywgditq sgedgvecki hvieqtefid dqtflphrst nlqpyikraa
      121 asklqsaekl myictdqlgl eqdfeqkqmp egklnvdgfl lcidvsqgcn rkfddqlkfv
      181 nnlfvqlsks kkpviiaatk cdecvdhylr evqafasnkk nllvvetsar fnvnietcft
      241 alvqmldktr gkpkiipyld ayktqrqlvv tatdkfeklv qtvrdyhatw ktvsnklknh
      301 pdyeeyihle gtrkarntfs khieqlkqeh irkrreeyin tlprafntll pnleeiehln
      361 wsealklmek radfqlcfvv lektpwdetd hidkindrri pfdllstlea ekvyqnhvqh
      421 lisekrrvem kekfkktlek iqfispgqpw eevmcfvmed eafkyitead skevygrhqr
      481 eivekakeef qemlfehsel fydldlnatp ssdkmseiht vlseepryka lqklapdres
      541 lllkhigfvy hptketclsg qnctdikveq llassllqld hgrlrlyhds tnidkvnlfi
      601 lgkdglaqel aneirtqstd deyaldgkiy eldlrpvdak spyflsqlwt aafkphgcfc
      661 vfnsieslnf igefigkirt easqirkdky manlpftlil anqrdsiskn lpilrhqgqq
      721 lanklqcpfv dvpggtyprk fnetqikqal rgvlesvkhn ldvvspvptn kdvseadlri
      781 vmcamcgdpf svdlilspfl dshscsaaqa gqnnslmldk iigekrrriq itilsyhssi
      841 gvrkdelvhg yilvysakrk asmgmlrafl sevqdtipvq lvavtdsqad ffeneaikel
      901 mtegehiate isakftalys lsqyhrqtev ftlffsdvle kknmiensyl sdstresthq
      961 sedvflpspr dcfpynnypd sdddteappp yspigddvql lptpsdrsry rldlegneyp
     1021 ihstpnchdh ernhkvpppi kpkpvapktn vkkldpnllk tieagigknp rkqtsrvpla
     1081 hpedmdpsdn ysepidtifk qkgysdeiyv vpddsqnrvi kirnsfvnnt qgdeengfsd
     1141 rtskshgerr pskykykskt lfskaksyyr rthsdasdde afttskakrk grhrgseedp
     1201 llspvetwkg gidnpaitsd qeldekkmkk kthkvkedkk qkkktknfnp ptrrnwesny
     1261 fgmplqdlvt aekpiplfve kcvefiedtg lcteglyrvs gnktdqdniq kqfdqdhnis
     1321 lvsmevtvna vagalkaffa dlpdplipys lhpelleaak ildkterlha lkeivkkfhp
     1381 vnydvfryii thlnrvsqhn kvnlmtadnl sicfwptlmr pdfenrefls ttkihqsvve
     1441 tfiqqcqfff yngeivetan tvappppsnp gqlaepmvpl qlppplqpql iqpqlqtdpl
     1501 gii
//
LOCUS       XP_061015129            1400 aa            linear   MAM 02-DEC-2023
DEFINITION  rho GTPase-activating protein 5 isoform X2 [Dama dama].
ACCESSION   XP_061015129
VERSION     XP_061015129.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159146.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1400
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1400
                     /product="rho GTPase-activating protein 5 isoform X2"
                     /calculated_mol_wt=160667
     Region          31..246
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            order(31..36,94,199..200,202,228..230)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206648"
     Site            53..55
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            199..202
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            228..230
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     Region          260..338
                     /region_name="RhoGAP-FF1"
                     /note="p190-A and -B Rho GAPs FF domain; pfam16512"
                     /db_xref="CDD:465153"
     Region          368..420
                     /region_name="FF"
                     /note="Contains two conserved F residues; smart00441"
                     /db_xref="CDD:128718"
     Region          429..481
                     /region_name="FF"
                     /note="Contains two conserved F residues; smart00441"
                     /db_xref="CDD:128718"
     Region          484..533
                     /region_name="FF"
                     /note="Contains two conserved F residues; smart00441"
                     /db_xref="CDD:128718"
     Region          556..1265
                     /region_name="RhoGAP_pG1_pG2"
                     /note="p190RhoGAP, pG1 and pG2 domains; pfam19518"
                     /db_xref="CDD:466111"
     Region          1261..>1397
                     /region_name="RhoGAP"
                     /note="GTPase-activator protein (GAP) for Rho-like
                     GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases.
                     Small GTPases (G proteins) cluster into distinct families,
                     and all act as molecular switches, active in their
                     GTP-bound form but inactive when bound to...; cl02570"
                     /db_xref="CDD:470621"
     Site            1298
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:238090"
     CDS             1..1400
                     /gene="ARHGAP5"
                     /coded_by="XM_061159146.1:345..4547"
                     /db_xref="GeneID:133068090"
ORIGIN      
        1 mmaknkeprp psytisvvgl sgtekdkgnc gvgksclcnr fvrskadeyy pehtsvlsti
       61 dfggrvvnnd hflywgditq sgedgvecki hvieqtefid dqtflphrst nlqpyikraa
      121 asklqsaekl myictdqlgl eqdfeqkqmp egklnvdgfl lcidvsqgcn rkfddqlkfv
      181 nnlfvqlsks kkpviiaatk cdecvdhylr evqafasnkk nllvvetsar fnvnietcft
      241 alvqmldktr gkpkiipyld ayktqrqlvv tatdkfeklv qtvrdyhatw ktvsnklknh
      301 pdyeeyihle gtrkarntfs khieqlkqeh irkrreeyin tlprafntll pnleeiehln
      361 wsealklmek radfqlcfvv lektpwdetd hidkindrri pfdllstlea ekvyqnhvqh
      421 lisekrrvem kekfkktlek iqfispgqpw eevmcfvmed eafkyitead skevygrhqr
      481 eivekakeef qemlfehsel fydldlnatp ssdkmseiht vlseepryka lqklapdres
      541 lllkhigfvy hptketclsg qnctdikveq llassllqld hgrlrlyhds tnidkvnlfi
      601 lgkdglaqel aneirtqstd deyaldgkiy eldlrpvdak spyflsqlwt aafkphgcfc
      661 vfnsieslnf igefigkirt easqirkdky manlpftlil anqrdsiskn lpilrhqgqq
      721 lanklqcpfv dvpggtyprk fnetqikqal rgvlesvkhn ldvvspvptn kdvseadlri
      781 vmcamcgdpf svdlilspfl dshscsaaqa gqnnslmldk iigekrrriq itilsyhssi
      841 gvrkdelvhg yilvysakrk asmgmlrafl sevqdtipvq lvavtdsqad ffeneaikel
      901 mtegehiate isakftalys lsqyhrqtev ftlffsdvle kknmiensyl sdstresthq
      961 sedvflpspr dcfpynnypd sdddteappp yspigddvql lptpsdrsry rldlegneyp
     1021 ihstpnchdh ernhkvpppi kpkpvapktn vkkldpnllk tieagigknp rkqtsrvpla
     1081 hpedmdpsdn ysepidtifk qkgysdeiyv vpddsqnrvi kirnsfvnnt qgdeengfsd
     1141 rtskshgerr pskykykskt lfskaksyyr rthsdasdde afttskakrk grhrgseedp
     1201 llspvetwkg gidnpaitsd qeldekkmkk kthkvkedkk qkkktknfnp ptrrnwesny
     1261 fgmplqdlvt aekpiplfve kcvefiedtg lcteglyrvs gnktdqdniq kqfdqdhnis
     1321 lvsmevtvna vagalkaffa dlpdplipys lhpelleaak ildkterlha lkeivkkfhp
     1381 vnydvfryii thlnrlsrrf
//
LOCUS       XP_061015130            2320 aa            linear   MAM 02-DEC-2023
DEFINITION  A-kinase anchor protein 6 isoform X1 [Dama dama].
ACCESSION   XP_061015130
VERSION     XP_061015130.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159147.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2320
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2320
                     /product="A-kinase anchor protein 6 isoform X1"
                     /calculated_mol_wt=256597
     Region          783..>886
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Region          960..1188
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1058..1063
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          2135..>2300
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..2320
                     /gene="AKAP6"
                     /coded_by="XM_061159147.1:111..7073"
                     /db_xref="GeneID:133068092"
ORIGIN      
        1 mltmsvtlsp lrsqdldpma tdaspmainl tptveqgege evmrdmdpdq qyekppplht
       61 gadwkivlhl peietwlrmt servrdltys vqqdsdskhv dvhlvqlkdi cedisdhveq
      121 ihalletefs lkllsysvnv ivdihavqll whqlrvsvlv lrerilqglq dangnytrqt
      181 dilqafseet kegrldalte vddsgqltik csqnylsldc gitafelsdy spsedllggl
      241 gdmtssqvkt kpfdswsyse meqefpelir svgllsvapd svpsncseav seeasqvsls
      301 addrgrieen nactveeqpg lmqgpsssae aptdavqpts eavkqesdsf sqrgaknpqp
      361 lacenttpkr sirdcfnyne dsptqptlpk rgfflkdetf knnlkgssgk kqmvdlkpem
      421 srstpslvdp pdrsklclvl qssypnspsa asqsyeclhk mgdghlentv gshikeisss
      481 lgrlndchke klrlkkphkt geevppcqtl kqepssdkqa kntrsstvpn avpsspskar
      541 qrpetdsast sslepchqrs gkaklpvqse tsssppftqs sessassdsv aslgpllseh
      601 kgkssysssp shvtrngqvv eawygsdeyl alpshlkqte vlalklenlt kllpqkprge
      661 tiqniddwel semnsdsemy ptyhvkkkht rlgrvspsss sdiasslges vesgplsdll
      721 sdeelcmpls gmkkytdeks ervsssekne shsaaksali qklmqdiqhq dnyeaiweki
      781 egfvnkldef iqwlneamet tenwtppkae tdglklylet hlsfklnvds hcalkeavee
      841 eghqllelia shkaglkdml rmiasqwkel qrqikrqhsw ilraldtika eilatdvsve
      901 geegtgspka evqlcyleaq rdaveqmslk lyseqytsgs krkeefadms kvhsgggngl
      961 ldfdseyqel wdwlidmesl vmdshdlmms eeqqqhlykr ysvemsirdl kktellskve
     1021 alkkggvllp ndllekvdsi nekwellgkt lgekiqdtma ghsgsstrdl lspesgslvr
     1081 qlevrikelk gwlrdtelfi fnsclrqeke gtmnaekqlq yfkslcreik qrrrgvasil
     1141 rlcqhllddr etcnlnadhq pmqliivnle rrweaivmqa vqwqtrlqkk mgkesetlnv
     1201 idpglmdlng tsedalewde tdisnklisl neesndldqe sqpvmpslnl eetgsenrsf
     1261 eeeagdhgas qyassitaps sphvyqvysl hnvelyedsh ipflknnpkf tsmtqpsvlt
     1321 kslskdssfs stkslpdllg gsnlvkpcpc hggdmsqnsg sesgivsegd tetttnsemc
     1381 llnavdgsps npdtehldpq medavnllkq nikdeeerik lpnssqlpis pvgcvngkvg
     1441 dlnsvtkhtp gclgeelqgk hdvftfydys ylqgsklklp mimkqsqsek ahvedpllhg
     1501 fyfdkkscks khqatelqpd appherilas aphemdhssy ksgdvektft gmqnarqlsl
     1561 lshsssiesl spggdlfalg ifkngsdslq rstsleswlt syksnedlfs chssgdlsvs
     1621 sgsvgelskr tldllnrlen iqspseqkik rsvsditlqs csqkmsfpgq lsldiassin
     1681 edspasltel sssdelslcs edivlhknki pesnasfrkr lprsvadesd vnvsmivnvs
     1741 ctsactdded dsdllssstl tlteeelcik dedddssiat ddeiyedcnv msgldyikne
     1801 lqtwirpklp ltrdkrrcnl sdeikgtkdv sssemtnssd tlnieallng sikhlsenng
     1861 nsknlphthe lgtkgenkkn ifkvnkdpyv admengnies tpesqkdkln eiskeseslg
     1921 sagkrisene hckckpvids sdessiagke svpqmvrhvp kkcqnhhhfe nqsaastpte
     1981 kscpelppet svingqdysn vlksssndap smagkpagcc lareqnetee nvaasdnvsc
     2041 cdcepdifhq kdaedcsvhd fvkeiidmas talkcksqpe nevtaptslt qikekvlehs
     2101 hrpiqlrkgd fysylslssh dsdcgevtny ieeksstplp pdmtdsgsed kedteyffea
     2161 cveedpaedk phfsdappne padpteaavp lptaagssrf sdtsfltnna dtvalssppk
     2221 ggdigkevdg lpqasndhge stevttpsrl gsekgssenp sesarpeehn assapsgvpg
     2281 lsskakqpkd kaawhpspta ltceenllnl heerhrnmhr
//
LOCUS       XP_061015131            2217 aa            linear   MAM 02-DEC-2023
DEFINITION  A-kinase anchor protein 6 isoform X2 [Dama dama].
ACCESSION   XP_061015131
VERSION     XP_061015131.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159148.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2217
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2217
                     /product="A-kinase anchor protein 6 isoform X2"
                     /calculated_mol_wt=244934
     Region          679..>783
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Region          857..1085
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            955..960
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          2032..>2197
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..2217
                     /gene="AKAP6"
                     /coded_by="XM_061159148.1:348..7001"
                     /db_xref="GeneID:133068092"
ORIGIN      
        1 mqnedicedi sdhveqihal letefslkll sysvnvivdi havqllwhql rvsvlvlrer
       61 ilqglqdang nytrqtdilq afseetkegr ldaltevdds gqltikcsqn ylsldcgita
      121 felsdyspse dllgglgdmt ssqvktkpfd swsysemeqe fpelirsvgl lsvapdsvps
      181 ncseavseea sqvslsaddr grieennact veeqpglmqg psssaeaptd avqptseavk
      241 qesdsfsqrg aknpqplace nttpkrsird cfnynedspt qptlpkrgff lkdetfknnl
      301 kgssgkkqmv dlkpemsrst pslvdppdrs klclvlqssy pnspsaasqs yeclhkmgdg
      361 hlentvgshi keissslgrl ndchkeklrl kkphktgeev ppcqtlkqep ssdkqakntr
      421 sstvpnavps spskarqrpe tdsastssle pchqrsgkak lpvqsetsss ppftqssess
      481 assdsvaslg pllsehkgks syssspshvt rngqvveawy gsdeylalps hlkqtevlal
      541 klenltkllp qkprgetiqn iddwelsemn sdsemyptyh vkkkhtrlgr vspssssdia
      601 sslgesvesg plsdllsdee lcmplsgmkk ytdekservs ssekneshsa aksaliqklm
      661 qdiqhqdnye aiwekiegfv nkldefiqwl neamettenw tppkaetdgl klylethlsf
      721 klnvdshcal keaveeeghq lleliashka eglkdmlrmi asqwkelqrq ikrqhswilr
      781 aldtikaeil atdvsvegee gtgspkaevq lcyleaqrda veqmslklys eqytsgskrk
      841 eefadmskvh sgggnglldf dseyqelwdw lidmeslvmd shdlmmseeq qqhlykrysv
      901 emsirdlkkt ellskvealk kggvllpndl lekvdsinek wellgktlge kiqdtmaghs
      961 gsstrdllsp esgslvrqle vrikelkgwl rdtelfifns clrqekegtm naekqlqyfk
     1021 slcreikqrr rgvasilrlc qhllddretc nlnadhqpmq liivnlerrw eaivmqavqw
     1081 qtrlqkkmgk esetlnvidp glmdlngtse dalewdetdi snklislnee sndldqesqp
     1141 vmpslnleet gsenrsfeee agdhgasqya ssitapssph vyqvyslhnv elyedshipf
     1201 lknnpkftsm tqpsvltksl skdssfsstk slpdllggsn lvkpcpchgg dmsqnsgses
     1261 givsegdtet ttnsemclln avdgspsnpd tehldpqmed avnllkqnik deeeriklpn
     1321 ssqlpispvg cvngkvgdln svtkhtpgcl geelqgkhdv ftfydysylq gsklklpmim
     1381 kqsqsekahv edpllhgfyf dkksckskhq atelqpdapp herilasaph emdhssyksg
     1441 dvektftgmq narqlsllsh sssieslspg gdlfalgifk ngsdslqrst sleswltsyk
     1501 snedlfschs sgdlsvssgs vgelskrtld llnrleniqs pseqkikrsv sditlqscsq
     1561 kmsfpgqlsl diassineds pasltelsss delslcsedi vlhknkipes nasfrkrlpr
     1621 svadesdvnv smivnvscts actddeddsd llssstltlt eeelcikded ddssiatdde
     1681 iyedcnvmsg ldyiknelqt wirpklpltr dkrrcnlsde ikgtkdvsss emtnssdtln
     1741 ieallngsik hlsenngnsk nlphthelgt kgenkknifk vnkdpyvadm engniestpe
     1801 sqkdklneis keseslgsag krisenehck ckpvidssde ssiagkesvp qmvrhvpkkc
     1861 qnhhhfenqs aastpteksc pelppetsvi ngqdysnvlk sssndapsma gkpagcclar
     1921 eqneteenva asdnvsccdc epdifhqkda edcsvhdfvk eiidmastal kcksqpenev
     1981 taptsltqik ekvlehshrp iqlrkgdfys ylslsshdsd cgevtnyiee ksstplppdm
     2041 tdsgsedked teyffeacve edpaedkphf sdappnepad pteaavplpt aagssrfsdt
     2101 sfltnnadtv alssppkggd igkevdglpq asndhgeste vttpsrlgse kgssenpses
     2161 arpeehnass apsgvpglss kakqpkdkaa whpsptaltc eenllnlhee rhrnmhr
//
LOCUS       XP_061015132             923 aa            linear   MAM 02-DEC-2023
DEFINITION  neuronal PAS domain-containing protein 3 [Dama dama].
ACCESSION   XP_061015132
VERSION     XP_061015132.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159149.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..923
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..923
                     /product="neuronal PAS domain-containing protein 3"
                     /calculated_mol_wt=99692
     Region          17..94
                     /region_name="bHLH-PAS_NPAS3_PASD6"
                     /note="basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS)
                     domain found in neuronal PAS domain-containing protein 3
                     (NPAS3) and similar proteins; cd19732"
                     /db_xref="CDD:381575"
     Site            order(23,25..27,31,33..34,38,59..60)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381575"
     Site            order(33,36..37,40,43..44,47,49..50,61,64..66,68,70..74)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381575"
     Region          139..197
                     /region_name="PAS"
                     /note="PAS domain; smart00091"
                     /db_xref="CDD:214512"
     Region          141..>400
                     /region_name="KinE"
                     /note="Sporulation sensor histidine kinase E [Cell cycle
                     control, cell division, chromosome partitioning, Signal
                     transduction mechanisms]; COG5809"
                     /db_xref="CDD:444511"
     Region          330..417
                     /region_name="PAS_3"
                     /note="PAS fold; pfam08447"
                     /db_xref="CDD:430001"
     Site            order(333,337,343,356..359,385,390)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238075"
     Site            order(353,357,365,368..369,397,399)
                     /site_type="other"
                     /note="heme pocket [chemical binding]"
                     /db_xref="CDD:238075"
     CDS             1..923
                     /gene="NPAS3"
                     /coded_by="XM_061159149.1:78..2849"
                     /db_xref="GeneID:133068094"
ORIGIN      
        1 maptkpsfqq dpsrrerlqa lrkeksrdaa rsrrgkenfe fyelakllpl paaitsqldk
       61 asiirltisy lkmrdfanqg dppwnlrmeg pppntsvkgi qmwkselcmr ktpcevigaq
      121 rrrspsalai evfeahlgsh ilqsldgfvf alnqegkfly isetvsiylg lsqveltgss
      181 vfdyvhpgdh vemaeqlgmk lppgrgllsq gttedgassa ssssqsetpe pvestspsll
      241 ttdntlersf firmkstltk rgvhikssgy kvihitgrlr lrvslshgrt vpsqimglvv
      301 vahalpppti nevridchmf vtrvnmdlni iycenrisdy mdltpvdivg krcyhfihae
      361 dvegirhshl dllnkgqcvt kyyrwmqkng gyiwiqssat iainaknane kniiwvnyll
      421 snpeykdtpm diaqlphlpe ktsessetsd sesdskdtsg itednensks dekgnqsens
      481 edpepdrkks gntcdndmhc nddghsssnp dsrdsddsfe hsdfenpkaa edgggggfga
      541 lgrmqikver gyvesesdlr lqdceslssd sakdsdsage agaqasskhq krkkrrkrqk
      601 ggsasrrrls sasspgglda glvepprlls spnsasvlki kteisepinf dndssiwnyp
      661 pnreisrnes pysmtkppss ehfpsppggg agggglhvai pdsvltppga dgtsssatat
      721 trktqfgtsa paalapvasd plspplsasp rdkhpgggsg ngnggggpga ansllytgdl
      781 ealqrlqagn vvlplvhrvt gtlaatstaa qrvyttgtir yapaevtlam qgnllpnaha
      841 vnfvdvnspg fgldpktpme mlyhhvhrln msgpfggavs aagltqmpag nvfttaeglf
      901 stlpfpvysn gihaaqtler ked
//
LOCUS       XP_061015133             293 aa            linear   MAM 02-DEC-2023
DEFINITION  E2F-associated phosphoprotein [Dama dama].
ACCESSION   XP_061015133
VERSION     XP_061015133.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159150.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..293
                     /product="E2F-associated phosphoprotein"
                     /calculated_mol_wt=33484
     Region          146..291
                     /region_name="Eapp_C"
                     /note="E2F-associated phosphoprotein; pfam10238"
                     /db_xref="CDD:463015"
     CDS             1..293
                     /gene="EAPP"
                     /coded_by="XM_061159150.1:61..942"
                     /db_xref="GeneID:133068095"
ORIGIN      
        1 mvsegpatmn rlqddydpya veepsdeepa lsssedevdv llhgtpdqkr klirecltge
       61 sesssedefe kemeaelnst iktmedklss letgssgdgi vgtaptkyyd niyfdsdsed
      121 edkaaqvtkk kkkkqhript ndellydpek dnrdqawvda qrrgyhcfgk hrprqqqqpv
      181 pnsdavlncp acmttlcldc qrhesyktqy ramfvmncsv nkeeilrykp penrkkrrgh
      241 kkmrsnqega aeeaetdvee iyhpvmctec stevavydkd evfhffnvla shs
//
LOCUS       XP_061015134             239 aa            linear   MAM 02-DEC-2023
DEFINITION  prolyl hydroxylase EGLN3 [Dama dama].
ACCESSION   XP_061015134
VERSION     XP_061015134.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159151.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..239
                     /product="prolyl hydroxylase EGLN3"
                     /calculated_mol_wt=27198
     Region          36..213
                     /region_name="P4Hc"
                     /note="Prolyl 4-hydroxylase alpha subunit homologues;
                     smart00702"
                     /db_xref="CDD:214780"
     CDS             1..239
                     /gene="EGLN3"
                     /coded_by="XM_061159151.1:313..1032"
                     /db_xref="GeneID:133068096"
ORIGIN      
        1 mplghimrld lekialeyiv pclhevgfcy ldnflgevvg dcvlervkql hcngalrdgq
       61 lagpragvsk rhlrgdqitw iggneegcea isyllslidr lvlycgsrlg kyyvkerska
      121 mvacypgngt gyvrhvdnpn gdgrcitciy ylnknwdakr hggvlrifpe gksfiadvep
      181 ifdrllffws drrnphevqp syatryamtv wyfdaeerae akkkfrnltr ktepalted
//
LOCUS       XP_061015135             225 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133068097 [Dama dama].
ACCESSION   XP_061015135
VERSION     XP_061015135.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159152.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..225
                     /product="uncharacterized protein LOC133068097"
                     /calculated_mol_wt=24854
     CDS             1..225
                     /gene="LOC133068097"
                     /coded_by="XM_061159152.1:256..933"
                     /db_xref="GeneID:133068097"
ORIGIN      
        1 msrveleepe dkrdkegapg dryqsmaecs pksaalaavp lcriqlwlpl dlwgpcsvig
       61 rhcsgprpqa tnsqrqfggp aqslvstavs pahkqpavre rleriqptvv qqwsggpqvd
      121 sevyqfssva qscptlcdpm ncstqaslsi tnfrsppkpm sivlvmpfnh lilchpllll
      181 psifpiirvf snesalrirw pkywsfsfsi spssehpgli sfrmd
//
LOCUS       XP_061015136             124 aa            linear   MAM 02-DEC-2023
DEFINITION  small ribosomal subunit protein eS25-like [Dama dama].
ACCESSION   XP_061015136
VERSION     XP_061015136.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159153.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..124
                     /product="small ribosomal subunit protein eS25-like"
                     /calculated_mol_wt=13346
     Region          12..110
                     /region_name="Ribosomal_S25"
                     /note="S25 ribosomal protein; pfam03297"
                     /db_xref="CDD:460876"
     CDS             1..124
                     /gene="LOC133068100"
                     /coded_by="XM_061159153.1:2955..3329"
                     /db_xref="GeneID:133068100"
ORIGIN      
        1 mppkddkkkk dagkstkkdk dpvnksggka kkkwskgkvg dklnnlvlfd kamcdklcke
       61 vpnsklvtpa vvserlqirg slaraalrel lskgliklvs khraqviysr htkggnalaa
      121 geda
//
LOCUS       XP_061015137              68 aa            linear   MAM 02-DEC-2023
DEFINITION  serine palmitoyltransferase small subunit A [Dama dama].
ACCESSION   XP_061015137
VERSION     XP_061015137.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159154.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..68
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..68
                     /product="serine palmitoyltransferase small subunit A"
                     /calculated_mol_wt=8076
     Region          7..60
                     /region_name="SPT_ssu-like"
                     /note="Small subunit of serine palmitoyltransferase-like;
                     pfam11779"
                     /db_xref="CDD:463347"
     CDS             1..68
                     /gene="SPTSSA"
                     /coded_by="XM_061159154.1:63..269"
                     /db_xref="GeneID:133068101"
ORIGIN      
        1 malarawkqm swfyyqyllv talymlepwe rtvfnsmlvs ivgmalytgy vfmpqhimai
       61 lhyfeivq
//
LOCUS       XP_061015138             166 aa            linear   MAM 02-DEC-2023
DEFINITION  cofilin-2 isoform X1 [Dama dama].
ACCESSION   XP_061015138
VERSION     XP_061015138.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159155.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..166
                     /product="cofilin-2 isoform X1"
                     /calculated_mol_wt=18606
     Region          3..153
                     /region_name="ADF_cofilin_like"
                     /note="Cofilin, Destrin, and related actin depolymerizing
                     factors; cd11286"
                     /db_xref="CDD:200442"
     Site            3..4
                     /site_type="other"
                     /note="putative G-actin interface [polypeptide binding]"
                     /db_xref="CDD:200442"
     Site            order(96,98,112,139,142)
                     /site_type="other"
                     /note="putative F-actin interface [polypeptide binding]"
                     /db_xref="CDD:200442"
     CDS             1..166
                     /gene="CFL2"
                     /coded_by="XM_061159155.1:120..620"
                     /db_xref="GeneID:133068102"
ORIGIN      
        1 masgvtvnde vikvfndmkv rksstqeeik krkkavlfcl sddkrqiive eakqilvgdi
       61 gdtvedpyts fvkllplndc ryalydatye tkeskkedlv fifwapesap lkskmiyass
      121 kdaikkkftg ikhewqvngl ddikdrstlg eklggnvvvs legkpl
//
LOCUS       XP_061015139             166 aa            linear   MAM 02-DEC-2023
DEFINITION  cofilin-2 isoform X2 [Dama dama].
ACCESSION   XP_061015139
VERSION     XP_061015139.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159156.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..166
                     /product="cofilin-2 isoform X2"
                     /calculated_mol_wt=18606
     Region          3..153
                     /region_name="ADF_cofilin_like"
                     /note="Cofilin, Destrin, and related actin depolymerizing
                     factors; cd11286"
                     /db_xref="CDD:200442"
     Site            3..4
                     /site_type="other"
                     /note="putative G-actin interface [polypeptide binding]"
                     /db_xref="CDD:200442"
     Site            order(96,98,112,139,142)
                     /site_type="other"
                     /note="putative F-actin interface [polypeptide binding]"
                     /db_xref="CDD:200442"
     CDS             1..166
                     /gene="CFL2"
                     /coded_by="XM_061159156.1:297..797"
                     /db_xref="GeneID:133068102"
ORIGIN      
        1 masgvtvnde vikvfndmkv rksstqeeik krkkavlfcl sddkrqiive eakqilvgdi
       61 gdtvedpyts fvkllplndc ryalydatye tkeskkedlv fifwapesap lkskmiyass
      121 kdaikkkftg ikhewqvngl ddikdrstlg eklggnvvvs legkpl
//
LOCUS       XP_061015140            1557 aa            linear   MAM 02-DEC-2023
DEFINITION  bromodomain adjacent to zinc finger domain protein 1A [Dama dama].
ACCESSION   XP_061015140
VERSION     XP_061015140.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159157.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1557
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1557
                     /product="bromodomain adjacent to zinc finger domain
                     protein 1A"
                     /calculated_mol_wt=178682
     Region          23..122
                     /region_name="WAC_Acf1_DNA_bd"
                     /note="ATP-utilizing chromatin assembly and remodelling
                     N-terminal; pfam10537"
                     /db_xref="CDD:463140"
     Region          422..485
                     /region_name="DDT"
                     /note="domain in different transcription and chromosome
                     remodeling factors; smart00571"
                     /db_xref="CDD:214726"
     Region          590..635
                     /region_name="WHIM1"
                     /note="WSTF, HB1, Itc1p, MBD9 motif 1; pfam15612"
                     /db_xref="CDD:464774"
     Region          <646..794
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          800..926
                     /region_name="WSD"
                     /note="Williams-Beuren syndrome DDT (WSD), D-TOX E motif;
                     pfam15613"
                     /db_xref="CDD:464775"
     Region          1150..1195
                     /region_name="PHD_BAZ1A"
                     /note="PHD finger found in bromodomain adjacent to zinc
                     finger domain protein 1A (BAZ1A); cd15627"
                     /db_xref="CDD:277097"
     Site            order(1150,1162..1166,1170,1190)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277097"
     Region          1423..1536
                     /region_name="Bromo_Acf1_like"
                     /note="Bromodomain; Acf1_like or BAZ1A_like subfamily.
                     Bromo adjacent to zinc finger 1A (BAZ1A) was identified as
                     a novel human bromodomain gene by cDNA library screening.
                     The Drosophila homologue, Acf1, is part of the CHRAC
                     (chromatin accessibility complex)...; cd05504"
                     /db_xref="CDD:99936"
     Site            order(1459,1464,1467,1506,1510,1516)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99936"
     CDS             1..1557
                     /gene="BAZ1A"
                     /coded_by="XM_061159157.1:248..4921"
                     /db_xref="GeneID:133068103"
ORIGIN      
        1 mpllhrkpfv rqkppadlrp deevfyckvt neifrhyddf fertilcnsl vwscavtgrp
       61 gltyqeales erkarqnlqs fpeplivpvl yltslthhsr lheicddifa yikdryfvee
      121 tvevirnnga rlqcrilevl ppshqngfan ghvssidget iiisdsddse tqnssfqngk
      181 kkdvvdpllf kykvqptkke lyecaivkat qisrrkhlfs rdklklflkq hcepqdgvik
      241 ikesslskyk iseqdfsyff pddpptfifs panrrrgrpp krvsvsqeds iaskqtiagy
      301 rnkitkerdr llkqeemksl afekaklkre kadaleakkk ekedkekkke elkkiveeer
      361 lkkkeekerl kierekerek lreekkkyme ylkqwskpre dmecddlkel peptpvktrl
      421 ppeifgdalm vleflnafge lfdlqdefpe gvtlevleea lvgndsegpl cellffflta
      481 ifqaiaeeee evakeqitda dtkdlteald edtdptksal savaslaaaw pqlhqgcslk
      541 sldldsctls eilrlhilas gadvtsanak yryqkrggfd atddacmelr lsnpslvkkl
      601 sstsvydltp gekmkilhal cgklltlvst rdfiedyvdi lrqakqefre lkaeqhrker
      661 eeaaarirkr keeklkeqeq kmkekqeklk edeqrnsiad isvgeeered fdtsteskei
      721 eqkeqdqdtv tededdpgph krgrrgkrgq ngfkeftrqd evncvtrepl taeeeealkq
      781 ehqrkekell ekiqsaiact nifplgrdrm yrrywifpsi pglfieedys gltedmllpr
      841 pssfqnnvqs qapqvsaktg dplmsestss idhgpcddsa qlpkpvhkpn rwcfyssceq
      901 ldqliealns rghresalke tllqeksric aqlarfseek fhfsdkpqtd skptynrgrs
      961 snvydpsqms aerqlelrlr dflldiedri yqgtlgaikv tdryvwrsal esgryellne
     1021 enkengiikt vnedveemei deqakvivkd rllgiktesp stvstnastp qsvsnvvhhl
     1081 amalfqieqg ierrflkapl dasdsgrsyk tvldrwresl lssaslsqvf lhlstldrsv
     1141 iwsksilnar ckicrkkgda enmvlcdgcd rghhtycvrp klktvpegdw fcpecrpkqr
     1201 srrlssrqrp slesddemeg smegeddevd ddeeegqsee eeyeveqded dsqeeeevsp
     1261 pkrgrpqvrl siktrgrlss sfssrgqrqd pgrytsrsqq stpkttvssk ttgrslrkik
     1321 sapptetksl riasrstrqs hgplqadvfv ellsprrkrr grksanntpe nspsfpnfrv
     1381 iatksseqss plnvasklsl qdseskrrgr krqsaesspm tlnrrssgrq ggvhelsafe
     1441 qlvvelvrhd dswpflklvs kiqvpdyydi ikkpialnii rekvnkceyk lasefiddie
     1501 lmfsncfeyn prntseakag trlqaffhiq aqklglhvts gnvdqvstpp aakksri
//
LOCUS       XP_061015141             406 aa            linear   MAM 02-DEC-2023
DEFINITION  sorting nexin-6 [Dama dama].
ACCESSION   XP_061015141
VERSION     XP_061015141.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159158.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..406
                     /product="sorting nexin-6"
                     /calculated_mol_wt=46504
     Region          30..170
                     /region_name="PX_SNX6"
                     /note="The phosphoinositide binding Phox Homology domain
                     of Sorting Nexin 6; cd07292"
                     /db_xref="CDD:132825"
     Site            order(69..71,96..97,140)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:132825"
     Region          186..403
                     /region_name="BAR_SNX6"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of Sorting
                     Nexin 6; cd07662"
                     /db_xref="CDD:153346"
     Site            order(216,219..220,223..224,226..227,230,233..234,237,
                     244..245,247..248,251,254..255,258..259,274,363,366..367,
                     369..371,374,377..378,380..382,384..385,388..389,391..392,
                     395..396,398..399)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153346"
     CDS             1..406
                     /gene="SNX6"
                     /coded_by="XM_061159158.1:74..1294"
                     /db_xref="GeneID:133068104"
ORIGIN      
        1 mmeglddgpd flseedrglk ainvdlqsda alqvdisdal serdkvkftv htksslpnfk
       61 qnefsvvrqh eefiwlhdsf ienedyagyi ippapprpdf dasreklqkl gegegsmtke
      121 eftkmkqele aeylaifkkt vamhevflcr vaahpilrkd lnfhvfleyn qdlsvrgknk
      181 kekledffkn mvksadgviv sgvkdvddff ehertflley hnrvkdasak sdrmtrshks
      241 aaddynrigs slyalgtqds tdickfflkv selfdktrki earvsadedl klsdllkyyl
      301 resqaakdll yrrsrslvdy enankaldka raknkdvlqa etsqqlccqk fekisesakq
      361 elidfktrrv aafrknlvel aelelkhakg nlqllqncla vlngdt
//
LOCUS       XP_061015142             320 aa            linear   MAM 02-DEC-2023
DEFINITION  N-acetylneuraminate lyase-like [Dama dama].
ACCESSION   XP_061015142
VERSION     XP_061015142.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159159.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..320
                     /product="N-acetylneuraminate lyase-like"
                     /calculated_mol_wt=35099
     Region          8..306
                     /region_name="TIM-like beta/alpha barrel domains"
                     /note="A large family of domains similar to triose
                     phosphate isomerase (TIM) which, in general, share an
                     eight beta/alpha closed barrel structure; cl21457"
                     /db_xref="CDD:473867"
     Site            173
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:188634"
     CDS             1..320
                     /gene="LOC133068107"
                     /coded_by="XM_061159159.1:40..1002"
                     /db_xref="GeneID:133068107"
ORIGIN      
        1 maspkkklqg lvaatitpmt ehgeinfsvi gryvdylvee qgvknvfvng ttgeglslsi
       61 sercrvaeew vtkgrnkldq ivihvgalsl kesqelaqha aeigadgiav iapfflklwn
      121 kdalinflke vaaaapalpf yyhhipaltw vkiraeelld giqdeipsfq glkfsdtdll
      181 dfgqcvdqnr qrqfaflfgv deqllsalvm gatgavgsty nylgkktkqm leaferkdfs
      241 salshqfciq rfinfvvklg fgvsqtkaim tlvsgipmgp prlplqkasr eftdnaeakl
      301 ksldflsctd lkggdmeacs
//
LOCUS       XP_061015143             584 aa            linear   MAM 02-DEC-2023
DEFINITION  mitochondrial ribonuclease P catalytic subunit [Dama dama].
ACCESSION   XP_061015143
VERSION     XP_061015143.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159160.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..584
                     /product="mitochondrial ribonuclease P catalytic subunit"
                     /calculated_mol_wt=67675
     Region          211..240
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          245..273
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          343..579
                     /region_name="PRORP"
                     /note="Protein-only RNase P; pfam16953"
                     /db_xref="CDD:465320"
     CDS             1..584
                     /gene="PRORP"
                     /coded_by="XM_061159160.1:413..2167"
                     /db_xref="GeneID:133068108"
ORIGIN      
        1 mtfyftgirs fpklwksnsy lgpssshfyl slflkdcygi rnqekwfsvk tmsaqntkam
       61 nlliakvrcv rkldegsnkq vsadsshmfa agaakkrsqm npsskapvlp pvkniiqlpt
      121 kplnseewdk lkeefkekan fenwiilqmv kshssldvak svlawvatkn ngivgydllv
      181 kylylcvfhk qtseiidvye imkarykrle sgaytllirg lmytdrwrea lllledlkkv
      241 mipskknydn ciqgalfhqd vnvawnlyqe llshdivpml etlkaffdfg kdmkddqysn
      301 klhsillylr nnqlypgesf ahsiktwfes ipgeqwkgqf itiqqsgqcl gcgktvesih
      361 lsseeyeflk ekimrdvidg gdqykkttpq elkrfqnfvk crppfdvvid glnvakmfpk
      421 aresqvllnv vshlakqnlq vlvlgrkhml tqnsrwkrve mekmqkqasf ffadnisedd
      481 pfllyatlhs gnhckfitkd lmrdhkaclp daktqrlffk wqqghqlaiv skhpgakitf
      541 qhilsydtvv qttgdswhip ydddlverys yevptkwlcl hrkt
//
LOCUS       XP_061015144             584 aa            linear   MAM 02-DEC-2023
DEFINITION  mitochondrial ribonuclease P catalytic subunit [Dama dama].
ACCESSION   XP_061015144
VERSION     XP_061015144.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159161.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..584
                     /product="mitochondrial ribonuclease P catalytic subunit"
                     /calculated_mol_wt=67675
     Region          211..240
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          245..273
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     Region          343..579
                     /region_name="PRORP"
                     /note="Protein-only RNase P; pfam16953"
                     /db_xref="CDD:465320"
     CDS             1..584
                     /gene="PRORP"
                     /coded_by="XM_061159161.1:647..2401"
                     /db_xref="GeneID:133068108"
ORIGIN      
        1 mtfyftgirs fpklwksnsy lgpssshfyl slflkdcygi rnqekwfsvk tmsaqntkam
       61 nlliakvrcv rkldegsnkq vsadsshmfa agaakkrsqm npsskapvlp pvkniiqlpt
      121 kplnseewdk lkeefkekan fenwiilqmv kshssldvak svlawvatkn ngivgydllv
      181 kylylcvfhk qtseiidvye imkarykrle sgaytllirg lmytdrwrea lllledlkkv
      241 mipskknydn ciqgalfhqd vnvawnlyqe llshdivpml etlkaffdfg kdmkddqysn
      301 klhsillylr nnqlypgesf ahsiktwfes ipgeqwkgqf itiqqsgqcl gcgktvesih
      361 lsseeyeflk ekimrdvidg gdqykkttpq elkrfqnfvk crppfdvvid glnvakmfpk
      421 aresqvllnv vshlakqnlq vlvlgrkhml tqnsrwkrve mekmqkqasf ffadnisedd
      481 pfllyatlhs gnhckfitkd lmrdhkaclp daktqrlffk wqqghqlaiv skhpgakitf
      541 qhilsydtvv qttgdswhip ydddlverys yevptkwlcl hrkt
//
LOCUS       XP_061015145             504 aa            linear   MAM 02-DEC-2023
DEFINITION  signal recognition particle subunit SRP54 isoform X1 [Dama dama].
ACCESSION   XP_061015145
VERSION     XP_061015145.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159162.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..504
                     /product="signal recognition particle subunit SRP54
                     isoform X1"
                     /calculated_mol_wt=55574
     Region          2..430
                     /region_name="SRP54_euk"
                     /note="signal recognition particle protein SRP54;
                     TIGR01425"
                     /db_xref="CDD:273615"
     CDS             1..504
                     /gene="LOC133068109"
                     /coded_by="XM_061159162.1:251..1765"
                     /db_xref="GeneID:133068109"
ORIGIN      
        1 mvladlgrki tsalrslsna tiineevlna mlkevctall eadvniklvk qlrenvksai
       61 dleemasgln krkmiqhavf kelvklvdpg vkawtptkgk qnvimfvglq gsgktttcsk
      121 layyyqrkgw ktclicadtf ragafdqlkq natkaripfy gsytemdpvi iasegvekfk
      181 nenfeiiivd tsgrhkqeds lfeemlqvan aiqpdnivyv mdasigqace aqakafkdkv
      241 dvasvivtkl dghakgggal savaatkspi ifigtgehid dfepfktqpf iskllgmgdi
      301 eglidkvnel klddnealie klkhgqftlr dmyeqfqnim kmgpfsqilg mipgfgtdfm
      361 skgneqesma rlkklmtimd smndqeldst dgakvfskqp griqrvargs gvstrdvqel
      421 ltqytkfaqm vkkmggikgl fkggdmsknv sqsqmaklnq qmakmmdprv lhhmggmagl
      481 qsmmrqfqqg aagnmkgmmg fnnm
//
LOCUS       XP_061015146             504 aa            linear   MAM 02-DEC-2023
DEFINITION  signal recognition particle subunit SRP54 isoform X1 [Dama dama].
ACCESSION   XP_061015146
VERSION     XP_061015146.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159163.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..504
                     /product="signal recognition particle subunit SRP54
                     isoform X1"
                     /calculated_mol_wt=55574
     Region          2..430
                     /region_name="SRP54_euk"
                     /note="signal recognition particle protein SRP54;
                     TIGR01425"
                     /db_xref="CDD:273615"
     CDS             1..504
                     /gene="LOC133068109"
                     /coded_by="XM_061159163.1:389..1903"
                     /db_xref="GeneID:133068109"
ORIGIN      
        1 mvladlgrki tsalrslsna tiineevlna mlkevctall eadvniklvk qlrenvksai
       61 dleemasgln krkmiqhavf kelvklvdpg vkawtptkgk qnvimfvglq gsgktttcsk
      121 layyyqrkgw ktclicadtf ragafdqlkq natkaripfy gsytemdpvi iasegvekfk
      181 nenfeiiivd tsgrhkqeds lfeemlqvan aiqpdnivyv mdasigqace aqakafkdkv
      241 dvasvivtkl dghakgggal savaatkspi ifigtgehid dfepfktqpf iskllgmgdi
      301 eglidkvnel klddnealie klkhgqftlr dmyeqfqnim kmgpfsqilg mipgfgtdfm
      361 skgneqesma rlkklmtimd smndqeldst dgakvfskqp griqrvargs gvstrdvqel
      421 ltqytkfaqm vkkmggikgl fkggdmsknv sqsqmaklnq qmakmmdprv lhhmggmagl
      481 qsmmrqfqqg aagnmkgmmg fnnm
//
LOCUS       XP_061015147             504 aa            linear   MAM 02-DEC-2023
DEFINITION  signal recognition particle subunit SRP54 isoform X1 [Dama dama].
ACCESSION   XP_061015147
VERSION     XP_061015147.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159164.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..504
                     /product="signal recognition particle subunit SRP54
                     isoform X1"
                     /calculated_mol_wt=55574
     Region          2..430
                     /region_name="SRP54_euk"
                     /note="signal recognition particle protein SRP54;
                     TIGR01425"
                     /db_xref="CDD:273615"
     CDS             1..504
                     /gene="LOC133068109"
                     /coded_by="XM_061159164.1:183..1697"
                     /db_xref="GeneID:133068109"
ORIGIN      
        1 mvladlgrki tsalrslsna tiineevlna mlkevctall eadvniklvk qlrenvksai
       61 dleemasgln krkmiqhavf kelvklvdpg vkawtptkgk qnvimfvglq gsgktttcsk
      121 layyyqrkgw ktclicadtf ragafdqlkq natkaripfy gsytemdpvi iasegvekfk
      181 nenfeiiivd tsgrhkqeds lfeemlqvan aiqpdnivyv mdasigqace aqakafkdkv
      241 dvasvivtkl dghakgggal savaatkspi ifigtgehid dfepfktqpf iskllgmgdi
      301 eglidkvnel klddnealie klkhgqftlr dmyeqfqnim kmgpfsqilg mipgfgtdfm
      361 skgneqesma rlkklmtimd smndqeldst dgakvfskqp griqrvargs gvstrdvqel
      421 ltqytkfaqm vkkmggikgl fkggdmsknv sqsqmaklnq qmakmmdprv lhhmggmagl
      481 qsmmrqfqqg aagnmkgmmg fnnm
//
LOCUS       XP_061015148             235 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM177A1 isoform X2 [Dama dama].
ACCESSION   XP_061015148
VERSION     XP_061015148.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159165.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..235
                     /product="protein FAM177A1 isoform X2"
                     /calculated_mol_wt=26047
     Region          61..176
                     /region_name="FAM177"
                     /note="FAM177 family; pfam14774"
                     /db_xref="CDD:434199"
     CDS             1..235
                     /gene="LOC133068109"
                     /coded_by="XM_061159165.1:51..758"
                     /db_xref="GeneID:133068109"
ORIGIN      
        1 mevglsavtl ylasasspva attmerepan raegeavnas gaaaaavfre saqqmsnerg
       61 fenvelgvig kkkkvprrvi hfvsgetmee ystdedevdg lekkdvlptv dptkltwgpy
      121 lwfhmlraat stlsvcdflg ekiasvlgis tpkyqyaide yyrmkkeeee eeeenrmsee
      181 aerqyqqnkl kadsivqsdq petlasssfv nlnfemegdc eviteikqnp vsvpl
//
LOCUS       XP_061015149             212 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM177A1 isoform X3 [Dama dama].
ACCESSION   XP_061015149
VERSION     XP_061015149.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159166.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..212
                     /product="protein FAM177A1 isoform X3"
                     /calculated_mol_wt=23826
     Region          38..153
                     /region_name="FAM177"
                     /note="FAM177 family; pfam14774"
                     /db_xref="CDD:434199"
     CDS             1..212
                     /gene="LOC133068109"
                     /coded_by="XM_061159166.1:75..713"
                     /db_xref="GeneID:133068109"
ORIGIN      
        1 merepanrae geavnasgaa aaavfresaq qmsnergfen velgvigkkk kvprrvihfv
       61 sgetmeeyst dedevdglek kdvlptvdpt kltwgpylwf hmlraatstl svcdflgeki
      121 asvlgistpk yqyaideyyr mkkeeeeeee enrmseeaer qyqqnklkad sivqsdqpet
      181 lasssfvnln femegdcevi teikqnpvsv pl
//
LOCUS       XP_061015150             575 aa            linear   MAM 02-DEC-2023
DEFINITION  signal recognition particle subunit SRP54 isoform X4 [Dama dama].
ACCESSION   XP_061015150
VERSION     XP_061015150.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159167.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..575
                     /product="signal recognition particle subunit SRP54
                     isoform X4"
                     /calculated_mol_wt=64053
     Region          2..430
                     /region_name="SRP54_euk"
                     /note="signal recognition particle protein SRP54;
                     TIGR01425"
                     /db_xref="CDD:273615"
     Region          <468..506
                     /region_name="FAM177"
                     /note="FAM177 family; pfam14774"
                     /db_xref="CDD:434199"
     CDS             1..575
                     /gene="LOC133068109"
                     /coded_by="XM_061159167.1:252..1979"
                     /db_xref="GeneID:133068109"
ORIGIN      
        1 mvladlgrki tsalrslsna tiineevlna mlkevctall eadvniklvk qlrenvksai
       61 dleemasgln krkmiqhavf kelvklvdpg vkawtptkgk qnvimfvglq gsgktttcsk
      121 layyyqrkgw ktclicadtf ragafdqlkq natkaripfy gsytemdpvi iasegvekfk
      181 nenfeiiivd tsgrhkqeds lfeemlqvan aiqpdnivyv mdasigqace aqakafkdkv
      241 dvasvivtkl dghakgggal savaatkspi ifigtgehid dfepfktqpf iskllgmgdi
      301 eglidkvnel klddnealie klkhgqftlr dmyeqfqnim kmgpfsqilg mipgfgtdfm
      361 skgneqesma rlkklmtimd smndqeldst dgakvfskqp griqrvargs gvstrdvqel
      421 ltqytkfaqm vkkmggikgl fkggdmsknv sqsqmaklnq qmakmmdprv lhhmvcdflg
      481 ekiasvlgis tpkyqyaide yyrmkkeeee eeeenrmsee aerqyqqnkl kadsivqsdq
      541 petlasssfv nlnfemegdc eviteikqnp vsvpl
//
LOCUS       XP_061015151             483 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein phosphatase 2A regulatory subunit B''
            subunit gamma isoform X1 [Dama dama].
ACCESSION   XP_061015151
VERSION     XP_061015151.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159168.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..483
                     /product="serine/threonine-protein phosphatase 2A
                     regulatory subunit B'' subunit gamma isoform X1"
                     /calculated_mol_wt=56666
     Region          86..467
                     /region_name="PPP2R3C"
                     /note="serine/threonine protein phosphatase 2A regulatory
                     subunit B' subunit gamma; cd21505"
                     /db_xref="CDD:410338"
     CDS             1..483
                     /gene="PPP2R3C"
                     /coded_by="XM_061159168.1:129..1580"
                     /db_xref="GeneID:133068110"
ORIGIN      
        1 mdwkeilrrr vatpstspns efgrsrplrd pgpkhrelgg rwmgrsstfe kkseqelkde
       61 emdlftkyys ewkggrkntn efyktiprfy yrlpaedevl lqklreesra vflqrksrel
      121 ldneelqnlw flldkhqtpp migeeaminy enflkvgeka gpkckqffta kvfakllhtd
      181 sygrisimqf fnyvmrkvwl hqtriglsly dvagqgylre sdlenyilel iptlpqldgl
      241 eksfysfyvc tavrkffffl dplrtgkiki qdilacsfld dllelrdeel skesqetnwf
      301 sapsalrvyg qylnldkdhn gmlskeelsr ygtatmtnvf ldrvfqeclt ydgemdykty
      361 ldfvlalenr kepaalqyif klldienkgy lnvfslnyff raiqelmkih gqdpvsfqdv
      421 kdeifdmvkp kdplkislqd linsnqgdtv ttilidlngf wtyenrealv andnenstdl
      481 ddt
//
LOCUS       XP_061015152             453 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein phosphatase 2A regulatory subunit B''
            subunit gamma isoform X2 [Dama dama].
ACCESSION   XP_061015152
VERSION     XP_061015152.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159169.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..453
                     /product="serine/threonine-protein phosphatase 2A
                     regulatory subunit B'' subunit gamma isoform X2"
                     /calculated_mol_wt=53225
     Region          56..437
                     /region_name="PPP2R3C"
                     /note="serine/threonine protein phosphatase 2A regulatory
                     subunit B' subunit gamma; cd21505"
                     /db_xref="CDD:410338"
     CDS             1..453
                     /gene="PPP2R3C"
                     /coded_by="XM_061159169.1:129..1490"
                     /db_xref="GeneID:133068110"
ORIGIN      
        1 mdwkeilrrr vatpstspnk kkseqelkde emdlftkyys ewkggrkntn efyktiprfy
       61 yrlpaedevl lqklreesra vflqrksrel ldneelqnlw flldkhqtpp migeeaminy
      121 enflkvgeka gpkckqffta kvfakllhtd sygrisimqf fnyvmrkvwl hqtriglsly
      181 dvagqgylre sdlenyilel iptlpqldgl eksfysfyvc tavrkffffl dplrtgkiki
      241 qdilacsfld dllelrdeel skesqetnwf sapsalrvyg qylnldkdhn gmlskeelsr
      301 ygtatmtnvf ldrvfqeclt ydgemdykty ldfvlalenr kepaalqyif klldienkgy
      361 lnvfslnyff raiqelmkih gqdpvsfqdv kdeifdmvkp kdplkislqd linsnqgdtv
      421 ttilidlngf wtyenrealv andnenstdl ddt
//
LOCUS       XP_061015153             341 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133068112 isoform X1 [Dama dama].
ACCESSION   XP_061015153
VERSION     XP_061015153.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159170.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..341
                     /product="uncharacterized protein LOC133068112 isoform X1"
                     /calculated_mol_wt=39080
     Region          <209..293
                     /region_name="UbiG"
                     /note="2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,
                     4-benzoquinol methylase [Coenzyme transport and
                     metabolism]; COG2227"
                     /db_xref="CDD:441829"
     CDS             1..341
                     /gene="LOC133068112"
                     /coded_by="XM_061159170.1:100..1125"
                     /db_xref="GeneID:133068112"
ORIGIN      
        1 mrtfrysaff snmefrsarl avlqllrtva padlpallqw mrttrdfdef tqdnndvilk
       61 niaedlrncl pretmlsseh lalqkiqqqp eptvhvdafl ydedfidslc eegkmsrnyc
      121 mvcgshrtap lgfishsfsl melkfiyhhv lpdlsgkvlv dvgsrlgtvl ygvksslgtq
      181 stlgntffsy wqqfclppsk gylyssasql ygvelngdfc qlqemiikky qftdrikvlh
      241 adictqglll qnadviimnn vfeyflnete qaraweyich nvrkqgsllv tvpgledsls
      301 glqvniqlsp wveeiplnyd vfpekdidre aleqihlyki l
//
LOCUS       XP_061015154             329 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133068112 isoform X2 [Dama dama].
ACCESSION   XP_061015154
VERSION     XP_061015154.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159171.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..329
                     /product="uncharacterized protein LOC133068112 isoform X2"
                     /calculated_mol_wt=37571
     Region          <197..281
                     /region_name="UbiG"
                     /note="2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,
                     4-benzoquinol methylase [Coenzyme transport and
                     metabolism]; COG2227"
                     /db_xref="CDD:441829"
     CDS             1..329
                     /gene="LOC133068112"
                     /coded_by="XM_061159171.1:306..1295"
                     /db_xref="GeneID:133068112"
ORIGIN      
        1 mefrsarlav lqllrtvapa dlpallqwmr ttrdfdeftq dnndvilkni aedlrnclpr
       61 etmlssehla lqkiqqqpep tvhvdaflyd edfidslcee gkmsrnycmv cgshrtaplg
      121 fishsfslme lkfiyhhvlp dlsgkvlvdv gsrlgtvlyg vksslgtqst lgntffsywq
      181 qfclppskgy lyssasqlyg velngdfcql qemiikkyqf tdrikvlhad ictqglllqn
      241 adviimnnvf eyflneteqa raweyichnv rkqgsllvtv pgledslsgl qvniqlspwv
      301 eeiplnydvf pekdidreal eqihlykil
//
LOCUS       XP_061015155             313 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133068112 isoform X3 [Dama dama].
ACCESSION   XP_061015155
VERSION     XP_061015155.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159172.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..313
                     /product="uncharacterized protein LOC133068112 isoform X3"
                     /calculated_mol_wt=35945
     Region          144..265
                     /region_name="UbiG"
                     /note="2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,
                     4-benzoquinol methylase [Coenzyme transport and
                     metabolism]; COG2227"
                     /db_xref="CDD:441829"
     CDS             1..313
                     /gene="LOC133068112"
                     /coded_by="XM_061159172.1:100..1041"
                     /db_xref="GeneID:133068112"
ORIGIN      
        1 mrtfrysaff snmefrsarl avlqllrtva padlpallqw mrttrdfdef tqdnndvilk
       61 niaedlrncl pretmlsseh lalqkiqqqp eptvhvdafl ydedfidslc eegkmsrnyc
      121 mvcgshrtap lgfishsfsl melkfiyhhv lpdlsgkvlv dvgsrlgtvl yggylyssas
      181 qlygvelngd fcqlqemiik kyqftdrikv lhadictqgl llqnadviim nnvfeyflne
      241 teqaraweyi chnvrkqgsl lvtvpgleds lsglqvniql spwveeipln ydvfpekdid
      301 realeqihly kil
//
LOCUS       XP_061015156             286 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133068112 isoform X4 [Dama dama].
ACCESSION   XP_061015156
VERSION     XP_061015156.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159173.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..286
                     /product="uncharacterized protein LOC133068112 isoform X4"
                     /calculated_mol_wt=32861
     CDS             1..286
                     /gene="LOC133068112"
                     /coded_by="XM_061159173.1:100..960"
                     /db_xref="GeneID:133068112"
ORIGIN      
        1 mrtfrysaff snmefrsarl avlqllrtva padlpallqw mrttrdfdef tqdnndvilk
       61 niaedlrncl pretmlsseh lalqkiqqqp eptvhvdafl ydedfidslc eegkmsrnyc
      121 mvcgshrtap lgfishsfsl melkfiyhhv lpdlsgkvlv dvgsrlgtvl ygvksslgtq
      181 stlgntffsy wqqfclppsk gylyssasql ygvelngdfc qlqemiikky qftdrikvlh
      241 adictqglll qnadviimnn vfeyflnete qarliysyll glkryr
//
LOCUS       XP_061015157             267 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133068112 isoform X5 [Dama dama].
ACCESSION   XP_061015157
VERSION     XP_061015157.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159174.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..267
                     /product="uncharacterized protein LOC133068112 isoform X5"
                     /calculated_mol_wt=30343
     Region          <135..219
                     /region_name="UbiG"
                     /note="2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,
                     4-benzoquinol methylase [Coenzyme transport and
                     metabolism]; COG2227"
                     /db_xref="CDD:441829"
     CDS             1..267
                     /gene="LOC133068112"
                     /coded_by="XM_061159174.1:204..1007"
                     /db_xref="GeneID:133068112"
ORIGIN      
        1 mlssehlalq kiqqqpeptv hvdaflyded fidslceegk msrnycmvcg shrtaplgfi
       61 shsfslmelk fiyhhvlpdl sgkvlvdvgs rlgtvlygvk sslgtqstlg ntffsywqqf
      121 clppskgyly ssasqlygve lngdfcqlqe miikkyqftd rikvlhadic tqglllqnad
      181 viimnnvfey flneteqara weyichnvrk qgsllvtvpg ledslsglqv niqlspwvee
      241 iplnydvfpe kdidrealeq ihlykil
//
LOCUS       XP_061015159             246 aa            linear   MAM 02-DEC-2023
DEFINITION  proteasome subunit alpha type-6 [Dama dama].
ACCESSION   XP_061015159
VERSION     XP_061015159.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159176.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..246
                     /product="proteasome subunit alpha type-6"
                     /calculated_mol_wt=27268
     Region          8..220
                     /region_name="proteasome_alpha_type_6"
                     /note="The 20S proteasome, multisubunit proteolytic
                     complex, is the central enzyme of nonlysosomal protein
                     degradation in both the cytosol and nucleus. It is
                     composed of 28 subunits arranged as four homoheptameric
                     rings that stack on top of one another forming...;
                     cd03754"
                     /db_xref="CDD:239723"
     Site            order(11..14,16..17,19..20,24,27,30..31,34,43,58,60..61,
                     84..86,88..89,120,123,126..127,130..134,152,157..158,160,
                     162..163,165)
                     /site_type="other"
                     /note="alpha subunit interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239723"
     Site            order(37,53,55,68,170)
                     /site_type="active"
                     /db_xref="CDD:239723"
     CDS             1..246
                     /gene="PSMA6"
                     /coded_by="XM_061159176.1:108..848"
                     /db_xref="GeneID:133068113"
ORIGIN      
        1 msrgssagfd rhitifspeg rlyqveyafk ainqggltsv avrgkdcavi vtqkkvpdkl
       61 ldsstvthlf kitenigcvm tgmtadsrsq vqraryeaan wkykygyeip vdmlckriad
      121 isqvytqnae mrplgccmil igideeqgpq vykcdpagyy cgfkataagv kqtestsfle
      181 kkvkkkfdwt feqtvetait clstvlsidf kpseievgvv tvenpkfril teaeidahlv
      241 alaerd
//
LOCUS       XP_061015160             314 aa            linear   MAM 02-DEC-2023
DEFINITION  NF-kappa-B inhibitor alpha [Dama dama].
ACCESSION   XP_061015160
VERSION     XP_061015160.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159177.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..314
                     /product="NF-kappa-B inhibitor alpha"
                     /calculated_mol_wt=35055
     Region          34..>256
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          73..108
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          110..141
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(143,145,149..150,153..155,157..158,162,165,180,182,
                     184,188..189,192..194,196..197,201,204,213,216,218,
                     222..223,226..228,230..231,235,238)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          143..180
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          182..213
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          216..246
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..314
                     /gene="NFKBIA"
                     /coded_by="XM_061159177.1:111..1055"
                     /db_xref="GeneID:133068114"
ORIGIN      
        1 mfqpaepgqd wamegprdal kkerllddrh dsgldsmkde eyeqmvkelr eirlepqeap
       61 rgaepwkqql tedgdsflhl aiiheekalt mevvrqvkgd laflnfqnnl qqtplhlavi
      121 tnqpeiaeal leagcdpelr dfrgntplhl aceqgclasv gvltqprgtq hlhsilqatn
      181 ynghtclhla sihgylgive llvslgadvn aqepcngrta lhlavdlqnp dlvslllkcg
      241 advnrvtyqg yspyqltwgr pstriqqqlg qltlenlqtl pesedeesyd teseftedel
      301 pyddcvlggq rltl
//
LOCUS       XP_061015161            2543 aa            linear   MAM 02-DEC-2023
DEFINITION  ral GTPase-activating protein subunit alpha-1 isoform X1 [Dama
            dama].
ACCESSION   XP_061015161
VERSION     XP_061015161.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159178.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2543
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2543
                     /product="ral GTPase-activating protein subunit alpha-1
                     isoform X1"
                     /calculated_mol_wt=285121
     Region          550..678
                     /region_name="RALGAPB_N"
                     /note="RALGAPB N-terminal domain; pfam20412"
                     /db_xref="CDD:466561"
     Region          <787..>954
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     Region          2286..2459
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     CDS             1..2543
                     /gene="RALGAPA1"
                     /coded_by="XM_061159178.1:186..7817"
                     /db_xref="GeneID:133068115"
ORIGIN      
        1 mfskkphgdv kkstqkvldt kkdaltrlkh lrivienaes idlkqffdqh fshiyyvffe
       61 nfvtieaslk qkghksqree ldailfifek ilqllperih qrwqfhsigl ilkkllhtgn
      121 slkirregvr lfllwlqalq nncsreqlwm fsclipgfsa pqseygprtl dnlinpplnl
      181 qetqvtieei tplvppqsgd kgqedltsyf leallkyivi qvkslewknk enqergfsfl
      241 fshfkkyylp yifpnicken slyhpvldip qmrpkphyvm ikkdaetnea iyctkepfik
      301 arvivirwlv sfwlepkpht gphipgmege vlpkniqraa aslvsreenk ndnadkadrs
      361 aepeqshsnt stlterepss sslcsideeh ltdieivrrv fsskrsnvnf vteifrqafl
      421 lpiceaaamr kvvkvyqewi qqeekplfmq epeeivisss dlpcidnvtd hdismeegek
      481 reeengtnva dhvrnstwpk ngtyqdvlhn aseeaieqni ragaqavlqv fiinssnifl
      541 lepaneiksl ldehtdmckr ilniyrfmvv qvsmdkktwe qmllvllrvt esvlkmpsqa
      601 flqfqgkknm tlagrlagpl fqtlivawik anlnvyisre lwddllsvls sltyweelat
      661 ewsltmetlt kvlarnlysl dlsdlpldkl seqkqkkhkg kgvghefqkv svdksfsrgw
      721 srdqpgqapm rqrsatttgs pgtekarsiv rqktvdidda qilprptrvr hfsqsedtgn
      781 evfgalseeq plprssstsd ilepftvera kgavpvidss srhapslqss teassitrst
      841 eshitdthsr esslevgdsi ydhlchlidp veladsafeq iqyidlegdd dllsslkeyf
      901 ketqeshskn elekdaalqe visfavnkde rssldkleyi dqesksentt sfvgtpeniq
      961 fqkepnstvf tnisapnqld sfmkaktsek ckqlnndkqs sepslgspcd kekrkhlyrq
     1021 tateldacid itlaekvkgv qinekitaph vlhakkttlk apvnrrmphv tstsklsptk
     1081 rslsetvthr akimkiatkk rnsvhvtfrp stesvqfynp lenkeapwkm rlrklsgfsg
     1141 gsnsnisnph tssnsaaelv kpgvyrpldt isaasasset iketteipta ilqkegtstn
     1201 qlgsrstiks ssheaglqqg slggvyktvv halskpkanv spqrqnrmpp eaplrdlysh
     1261 vmgyfgrkaa vnkedmstkl pplnsdigss nanvpdlmde fiaerlrsgn astmtrrgss
     1321 pgsleipkdl pdilnkqnqm rpiddpgvps ewtspasags sdlissdshs dsfsafqydg
     1381 rkfdnfgfga dtgnassadm dsgsghyqsa eeqevasltt lhidsetssl nqqafcteva
     1441 tvtgsesasp vhsalgsrsq tpspstlnid hmeqkdlqld eklhhsvlqt pddleisefp
     1501 seccsvmagg tltgwhadva tvmwrrmlgi lgdvnaimdp eihaqvfdyl celwqnlaki
     1561 rdnlgistdn ltspsppvli pplriltpwl fkatmltdky kqgklhaykl icntmkrrqd
     1621 vspnrdflth fynimhcgll hidqdivnti ikhcspqffs lglpgatmli mdfivaagrv
     1681 assaflnapr veaqvllgsl vcfpnlycel palhpnipdi avsqftdvke liiktvlssa
     1741 rdepsgparc valcslgiwi ceelvheshh pqikealnvi cvslkftnkt vahvacnmlh
     1801 mlvhyvprlq iyqpdsplki iqiliatith llpsteassy emdkrlvvsl llclldwima
     1861 lplktllqpv hatgaendki eksvlnciyk vlhgcvygaq cfsnpryfpi slsdlasvdy
     1921 dpfmhleslk epeplhspds erssklqpvt evktqmqqgl isiaartvit hlvnhlghyp
     1981 msggpamlts qvcenhdnhy sestelspel fespniqffv lnnttlvsci qiraeesipg
     2041 gglsaglasa nsnvriivrd lsgkyswdsa ilygpplvsg lseptslvls lshqekpeep
     2101 sashecledi tvkdgislqf krsfretvpt wdtirdeedv ldellqylgv tspeclqrtg
     2161 vslnipapqp vcisekqend vinailkqht eekefvekhf ndlnmkaaeq deptpqkpqs
     2221 afyycrllls ilgmnswdkr rsfhllkkne kllrelrnld srqcrethki avfyvaegqe
     2281 dkhsiltntg gsqayedfva glgwevnltn hcgfmgglqk nkstglttpy fatstvevif
     2341 hvstrmpsds ddsltkklrh lgndevhivw sehtrdyrrg iiptefgdvl iviypmknhm
     2401 fsiqimkkpe vpffgplfdg aivngkvlpi mvratainas ralksliply qnfyeerary
     2461 lqtivqhhle pttfedfaaq vfspapyhhl psdagsypei lpsetptaaq vdgadlaspm
     2521 sprtsksrms mklrrssgsa nks
//
LOCUS       XP_061015162            2496 aa            linear   MAM 02-DEC-2023
DEFINITION  ral GTPase-activating protein subunit alpha-1 isoform X2 [Dama
            dama].
ACCESSION   XP_061015162
VERSION     XP_061015162.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159179.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2496
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2496
                     /product="ral GTPase-activating protein subunit alpha-1
                     isoform X2"
                     /calculated_mol_wt=280252
     Region          550..678
                     /region_name="RALGAPB_N"
                     /note="RALGAPB N-terminal domain; pfam20412"
                     /db_xref="CDD:466561"
     Region          <787..>954
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     Region          2286..2459
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     CDS             1..2496
                     /gene="RALGAPA1"
                     /coded_by="XM_061159179.1:189..7679"
                     /db_xref="GeneID:133068115"
ORIGIN      
        1 mfskkphgdv kkstqkvldt kkdaltrlkh lrivienaes idlkqffdqh fshiyyvffe
       61 nfvtieaslk qkghksqree ldailfifek ilqllperih qrwqfhsigl ilkkllhtgn
      121 slkirregvr lfllwlqalq nncsreqlwm fsclipgfsa pqseygprtl dnlinpplnl
      181 qetqvtieei tplvppqsgd kgqedltsyf leallkyivi qvkslewknk enqergfsfl
      241 fshfkkyylp yifpnicken slyhpvldip qmrpkphyvm ikkdaetnea iyctkepfik
      301 arvivirwlv sfwlepkpht gphipgmege vlpkniqraa aslvsreenk ndnadkadrs
      361 aepeqshsnt stlterepss sslcsideeh ltdieivrrv fsskrsnvnf vteifrqafl
      421 lpiceaaamr kvvkvyqewi qqeekplfmq epeeivisss dlpcidnvtd hdismeegek
      481 reeengtnva dhvrnstwpk ngtyqdvlhn aseeaieqni ragaqavlqv fiinssnifl
      541 lepaneiksl ldehtdmckr ilniyrfmvv qvsmdkktwe qmllvllrvt esvlkmpsqa
      601 flqfqgkknm tlagrlagpl fqtlivawik anlnvyisre lwddllsvls sltyweelat
      661 ewsltmetlt kvlarnlysl dlsdlpldkl seqkqkkhkg kgvghefqkv svdksfsrgw
      721 srdqpgqapm rqrsatttgs pgtekarsiv rqktvdidda qilprptrvr hfsqsedtgn
      781 evfgalseeq plprssstsd ilepftvera kgavpvidss srhapslqss teassitrst
      841 eshitdthsr esslevgdsi ydhlchlidp veladsafeq iqyidlegdd dllsslkeyf
      901 ketqeshskn elekdaalqe visfavnkde rssldkleyi dqesksentt sfvgtpeniq
      961 fqkepnstvf tnisapnqld sfmkaktsek ckqlnndkqs sepslgspcd kekrkhlyrq
     1021 tateldacid itlaekvkgv qinekitaph vlhakkttlk apvnrrmphv tstsklsptk
     1081 rslsetvthr akimkiatkk rnsvhvtfrp stesvqfynp lenkeapwkm rlrklsgfsg
     1141 gsnsnisnph tssnsaaelv kpgvyrpldt isaasasset iketteipta ilqkegtstn
     1201 qlgsrstiks ssheaglqqg slggvyktvv halskpkanv spqrqnrmpp eaplrdlysh
     1261 vmgyfgrkaa vnkedmstkl pplnsdigss nanvpdlmde fiaerlrsgn astmtrrgss
     1321 pgsleipkdl pdilnkqnqm rpiddpgvps ewtspasags sdlissdshs dsfsafqydg
     1381 rkfdnfgfga dtgnassadm dsgsghyqsa eeqevasltt lhidsetssl nqqafcteva
     1441 tvtgsesasp vhsalgsrsq tpspstlnid hmeqkdlqld eklhhsvlqt pddleisefp
     1501 seccsvmagg tltgwhadva tvmwrrmlgi lgdvnaimdp eihaqvfdyl celwqnlaki
     1561 rdnlgistdn ltspsppvli pplriltpwl fkatmltdky kqgklhaykl icntmkrrqd
     1621 vspnrdflth fynimhcgll hidqdivnti ikhcspqffs lglpgatmli mdfivaagrv
     1681 assaflnapr veaqvllgsl vcfpnlycel palhpnipdi avsqftdvke liiktvlssa
     1741 rdepsgparc valcslgiwi ceelvheshh pqikealnvi cvslkftnkt vahvacnmlh
     1801 mlvhyvprlq iyqpdsplki iqiliatith llpsteassy emdkrlvvsl llclldwima
     1861 lplktllqpv hatgaendki eksvlnciyk vlhgcvygaq cfsnpryfpi slsdlasvdy
     1921 dpfmhleslk epeplhspds erssklqpvt evktqmqqgl isiaartvit hlvnhlghyp
     1981 msggpamlts qvcenhdnhy sestelspel fespniqffv lnnttlvsci qiraeesipg
     2041 gglsaglasa nsnvriivrd lsgkyswdsa ilygpplvsg lseptslvls lshqekpeep
     2101 sashecledi tvkdgislqf krsfretvpt wdtirdeedv ldellqylgv tspeclqrtg
     2161 vslnipapqp vcisekqend vinailkqht eekefvekhf ndlnmkaaeq deptpqkpqs
     2221 afyycrllls ilgmnswdkr rsfhllkkne kllrelrnld srqcrethki avfyvaegqe
     2281 dkhsiltntg gsqayedfva glgwevnltn hcgfmgglqk nkstglttpy fatstvevif
     2341 hvstrmpsds ddsltkklrh lgndevhivw sehtrdyrrg iiptefgdvl iviypmknhm
     2401 fsiqimkkpe vpffgplfdg aivngkvlpi mvratainas ralksliply qnfyeerary
     2461 lqtivqhhle pttfedfaaq vfspapyhhl psdadh
//
LOCUS       XP_061015163            2115 aa            linear   MAM 02-DEC-2023
DEFINITION  ral GTPase-activating protein subunit alpha-1 isoform X3 [Dama
            dama].
ACCESSION   XP_061015163
VERSION     XP_061015163.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159180.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2115
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2115
                     /product="ral GTPase-activating protein subunit alpha-1
                     isoform X3"
                     /calculated_mol_wt=235378
     Region          122..250
                     /region_name="RALGAPB_N"
                     /note="RALGAPB N-terminal domain; pfam20412"
                     /db_xref="CDD:466561"
     Region          <359..>526
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     Region          1858..2031
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     CDS             1..2115
                     /gene="RALGAPA1"
                     /coded_by="XM_061159180.1:147..6494"
                     /db_xref="GeneID:133068115"
ORIGIN      
        1 mrkvvkvyqe wiqqeekplf mqepeeivis ssdlpcidnv tdhdismeeg ekreeengtn
       61 vadhvrnstw pkngtyqdvl hnaseeaieq niragaqavl qvfiinssni fllepaneik
      121 slldehtdmc krilniyrfm vvqvsmdkkt weqmllvllr vtesvlkmps qaflqfqgkk
      181 nmtlagrlag plfqtlivaw ikanlnvyis relwddllsv lssltyweel atewsltmet
      241 ltkvlarnly sldlsdlpld klseqkqkkh kgkgvghefq kvsvdksfsr gwsrdqpgqa
      301 pmrqrsattt gspgtekars ivrqktvdid daqilprptr vrhfsqsedt gnevfgalse
      361 eqplprssst sdilepftve rakgavpvid sssrhapslq ssteassitr steshitdth
      421 sresslevgd siydhlchli dpveladsaf eqiqyidleg dddllsslke yfketqeshs
      481 knelekdaal qevisfavnk derssldkle yidqesksen ttsfvgtpen iqfqkepnst
      541 vftnisapnq ldsfmkakts ekckqlnndk qssepslgsp cdkekrkhly rqtateldac
      601 iditlaekvk gvqinekita phvlhakktt lkapvnrrmp hvtstsklsp tkrslsetvt
      661 hrakimkiat kkrnsvhvtf rpstesvqfy nplenkeapw kmrlrklsgf sggsnsnisn
      721 phtssnsaae lvkpgvyrpl dtisaasass etiketteip tailqkegts tnqlgsrsti
      781 ksssheaglq qgslggvykt vvhalskpka nvspqrqnrm ppeaplrdly shvmgyfgrk
      841 aavnkedmst klpplnsdig ssnanvpdlm defiaerlrs gnastmtrrg sspgsleipk
      901 dlpdilnkqn qmrpiddpgv psewtspasa gssdlissds hsdsfsafqy dgrkfdnfgf
      961 gadtgnassa dmdsgsghyq saeeqevasl ttlhidsets slnqqafcte vatvtgsesa
     1021 spvhsalgsr sqtpspstln idhmeqkdlq ldeklhhsvl qtpddleise fpseccsvma
     1081 ggtltgwhad vatvmwrrml gilgdvnaim dpeihaqvfd ylcelwqnla kirdnlgist
     1141 dnltspsppv lipplriltp wlfkatmltd kykqgklhay klicntmkrr qdvspnrdfl
     1201 thfynimhcg llhidqdivn tiikhcspqf fslglpgatm limdfivaag rvassaflna
     1261 prveaqvllg slvcfpnlyc elpalhpnip diavsqftdv keliiktvls sardepsgpa
     1321 rcvalcslgi wiceelvhes hhpqikealn vicvslkftn ktvahvacnm lhmlvhyvpr
     1381 lqiyqpdspl kiiqiliati thllpsteas syemdkrlvv slllclldwi malplktllq
     1441 pvhatgaend kieksvlnci ykvlhgcvyg aqcfsnpryf pislsdlasv dydpfmhles
     1501 lkepeplhsp dserssklqp vtevktqmqq glisiaartv ithlvnhlgh ypmsggpaml
     1561 tsqvcenhdn hysestelsp elfespniqf fvlnnttlvs ciqiraeesi pggglsagla
     1621 sansnvriiv rdlsgkyswd sailygpplv sglseptslv lslshqekpe epsashecle
     1681 ditvkdgisl qfkrsfretv ptwdtirdee dvldellqyl gvtspeclqr tgvslnipap
     1741 qpvcisekqe ndvinailkq hteekefvek hfndlnmkaa eqdeptpqkp qsafyycrll
     1801 lsilgmnswd krrsfhllkk nekllrelrn ldsrqcreth kiavfyvaeg qedkhsiltn
     1861 tggsqayedf vaglgwevnl tnhcgfmggl qknkstgltt pyfatstvev ifhvstrmps
     1921 dsddsltkkl rhlgndevhi vwsehtrdyr rgiiptefgd vliviypmkn hmfsiqimkk
     1981 pevpffgplf dgaivngkvl pimvratain asralkslip lyqnfyeera rylqtivqhh
     2041 lepttfedfa aqvfspapyh hlpsdagsyp eilpsetpta aqvdgadlas pmsprtsksr
     2101 msmklrrssg sanks
//
LOCUS       XP_061015164            2084 aa            linear   MAM 02-DEC-2023
DEFINITION  ral GTPase-activating protein subunit alpha-1 isoform X4 [Dama
            dama].
ACCESSION   XP_061015164
VERSION     XP_061015164.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159181.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2084
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2084
                     /product="ral GTPase-activating protein subunit alpha-1
                     isoform X4"
                     /calculated_mol_wt=234514
     Region          550..678
                     /region_name="RALGAPB_N"
                     /note="RALGAPB N-terminal domain; pfam20412"
                     /db_xref="CDD:466561"
     Region          1827..2000
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     CDS             1..2084
                     /gene="RALGAPA1"
                     /coded_by="XM_061159181.1:180..6434"
                     /db_xref="GeneID:133068115"
ORIGIN      
        1 mfskkphgdv kkstqkvldt kkdaltrlkh lrivienaes idlkqffdqh fshiyyvffe
       61 nfvtieaslk qkghksqree ldailfifek ilqllperih qrwqfhsigl ilkkllhtgn
      121 slkirregvr lfllwlqalq nncsreqlwm fsclipgfsa pqseygprtl dnlinpplnl
      181 qetqvtieei tplvppqsgd kgqedltsyf leallkyivi qvkslewknk enqergfsfl
      241 fshfkkyylp yifpnicken slyhpvldip qmrpkphyvm ikkdaetnea iyctkepfik
      301 arvivirwlv sfwlepkpht gphipgmege vlpkniqraa aslvsreenk ndnadkadrs
      361 aepeqshsnt stlterepss sslcsideeh ltdieivrrv fsskrsnvnf vteifrqafl
      421 lpiceaaamr kvvkvyqewi qqeekplfmq epeeivisss dlpcidnvtd hdismeegek
      481 reeengtnva dhvrnstwpk ngtyqdvlhn aseeaieqni ragaqavlqv fiinssnifl
      541 lepaneiksl ldehtdmckr ilniyrfmvv qvsmdkktwe qmllvllrvt esvlkmpsqa
      601 flqfqgkknm tlagrlagpl fqtlivawik anlnvyisre lwddllsvls sltyweelat
      661 ewsltmetlt kvlarnlysl dlsdlpldkl seqkqkkhkg kgvghefqkv svdksfsrgw
      721 srdqpgqapm rqrsatttgs pgtekarsiv rqktvdidda qilprptrvr hfsqsedtgn
      781 evfgalseeq plprssstsd ilepftvera kvnkedmstk lpplnsdigs snanvpdlmd
      841 efiaerlrsg nastmtrrgs spgsleipkd lpdilnkqnq mrpiddpgvp sewtspasag
      901 ssdlissdsh sdsfsafqyd grkfdnfgfg adtgnassad mdsgsghyqs aeeqevaslt
      961 tlhidsetss lnqqafctev atvtgsesas pvhsalgsrs qtpspstlni dhmeqkdlql
     1021 deklhhsvlq tpddleisef pseccsvmag gtltgwhadv atvmwrrmlg ilgdvnaimd
     1081 peihaqvfdy lcelwqnlak irdnlgistd nltspsppvl ipplriltpw lfkatmltdk
     1141 ykqgklhayk licntmkrrq dvspnrdflt hfynimhcgl lhidqdivnt iikhcspqff
     1201 slglpgatml imdfivaagr vassaflnap rveaqvllgs lvcfpnlyce lpalhpnipd
     1261 iavsqftdvk eliiktvlss ardepsgpar cvalcslgiw iceelvhesh hpqikealnv
     1321 icvslkftnk tvahvacnml hmlvhyvprl qiyqpdsplk iiqiliatit hllpsteass
     1381 yemdkrlvvs lllclldwim alplktllqp vhatgaendk ieksvlnciy kvlhgcvyga
     1441 qcfsnpryfp islsdlasvd ydpfmhlesl kepeplhspd serssklqpv tevktqmqqg
     1501 lisiaartvi thlvnhlghy pmsggpamlt sqvcenhdnh ysestelspe lfespniqff
     1561 vlnnttlvsc iqiraeesip ggglsaglas ansnvriivr dlsgkyswds ailygpplvs
     1621 glseptslvl slshqekpee psashecled itvkdgislq fkrsfretvp twdtirdeed
     1681 vldellqylg vtspeclqrt gvslnipapq pvcisekqen dvinailkqh teekefvekh
     1741 fndlnmkaae qdeptpqkpq safyycrlll silgmnswdk rrsfhllkkn ekllrelrnl
     1801 dsrqcrethk iavfyvaegq edkhsiltnt ggsqayedfv aglgwevnlt nhcgfmgglq
     1861 knkstglttp yfatstvevi fhvstrmpsd sddsltkklr hlgndevhiv wsehtrdyrr
     1921 giiptefgdv liviypmknh mfsiqimkkp evpffgplfd gaivngkvlp imvrataina
     1981 sralkslipl yqnfyeerar ylqtivqhhl epttfedfaa qvfspapyhh lpsdagsype
     2041 ilpsetptaa qvdgadlasp msprtsksrm smklrrssgs anks
//
LOCUS       XP_061015165             369 aa            linear   MAM 02-DEC-2023
DEFINITION  pyruvate dehydrogenase E1 component subunit beta,
            mitochondrial-like [Dama dama].
ACCESSION   XP_061015165
VERSION     XP_061015165.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159182.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..369
                     /product="pyruvate dehydrogenase E1 component subunit
                     beta, mitochondrial-like"
                     /calculated_mol_wt=40097
     Region          <42..365
                     /region_name="PRK11892"
                     /note="pyruvate dehydrogenase subunit beta; Provisional"
                     /db_xref="CDD:237011"
     CDS             1..369
                     /gene="LOC133068116"
                     /coded_by="XM_061159182.1:9..1118"
                     /db_xref="GeneID:133068116"
ORIGIN      
        1 mdegledtvk mavvavlvrr pleqvsgllr rrfhrtapaa lqvtvreain qgmdeelerd
       61 ekvfllgeev aqydgaykvs rglwkkygdk riidtpisem gfagiavgaa maglrpicef
      121 mtfnfsmqai dqvinsaakt yymsgglqsv pivfrgpnga sagvaaqhsq cfaawyghcp
      181 glkvvspwss edakgliksa irdnnpvvvl enelmygvpf elpseaqskd flipigkaki
      241 erpgthvtiv ahsrpvghcl eaatvlskeg iecevinlqt irpmdietie asvmktnhlv
      301 tveggwpqfg vgaeicarim egpafnflda pavrvtgadv pmpyakiled nsvpqvkdii
      361 faikktlni
//
LOCUS       XP_061015166             323 aa            linear   MAM 02-DEC-2023
DEFINITION  breast cancer metastasis-suppressor 1-like protein [Dama dama].
ACCESSION   XP_061015166
VERSION     XP_061015166.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159183.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..323
                     /product="breast cancer metastasis-suppressor 1-like
                     protein"
                     /calculated_mol_wt=37498
     Region          61..>177
                     /region_name="Sds3"
                     /note="Sds3-like; pfam08598"
                     /db_xref="CDD:430099"
     CDS             1..323
                     /gene="BRMS1L"
                     /coded_by="XM_061159183.1:155..1126"
                     /db_xref="GeneID:133068117"
ORIGIN      
        1 mpvhsrgdkk etnhhdemev dyaenegsss ededtesssv sedgdssemd dedcerrrme
       61 cldemsnlek qftdlkdqly kerlsqvdak lqeviagkap eyleplatlq enmqirtkva
      121 giyrelcles vknkyeceiq asrqhcesek lllydtvqse leekirrlee drhsiditse
      181 lwndelqsrk krkdpfspdk kkpvvvsgpy ivymlqdldi ledwttirka matlgphrvk
      241 teppvklekh lhsarseegr lyydgewyir gqticidkkd ecptsavitt inhdevwfkr
      301 pdgsksklyi sqlqkgkysi khs
//
LOCUS       XP_061015167             344 aa            linear   MAM 02-DEC-2023
DEFINITION  MAP3K12-binding inhibitory protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061015167
VERSION     XP_061015167.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159184.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..344
                     /product="MAP3K12-binding inhibitory protein 1 isoform X1"
                     /calculated_mol_wt=38781
     CDS             1..344
                     /gene="MBIP"
                     /coded_by="XM_061159184.1:76..1110"
                     /db_xref="GeneID:133068120"
ORIGIN      
        1 maaaaelsrp tigdrslers cspslsrdiv cevfrslqnl agqlnlrddv vkitidwnkl
       61 qsvsalqpaf lfsaleqhvl ylqpflaklq plikeenttv veeigktetg nknevnanfp
      121 igdleeeekh kdcdlgdvkk tqihfdsevi qikagkaeid rrisafierk qaeinennvr
      181 efcnvidcnq enscartdai ftpypgfksh vkvsrvvnty gpqtrsegiq gsghkpnsml
      241 rdcgnqavee rlqnieahlr lqtggpvprd iyqrikkled rilelegisp eyfqsvnfsg
      301 krrkvqppqq nyslaeldek isalkqallr ksretesmat rhlp
//
LOCUS       XP_061015168             343 aa            linear   MAM 02-DEC-2023
DEFINITION  MAP3K12-binding inhibitory protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061015168
VERSION     XP_061015168.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159185.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..343
                     /product="MAP3K12-binding inhibitory protein 1 isoform X2"
                     /calculated_mol_wt=38653
     CDS             1..343
                     /gene="MBIP"
                     /coded_by="XM_061159185.1:76..1107"
                     /db_xref="GeneID:133068120"
ORIGIN      
        1 maaaaelsrp tigdrslers cspslsrdiv cevfrslqnl agqlnlrddv vkitidwnkl
       61 qsvsalqpaf lfsaleqhvl ylqpflaklq plikeenttv veeigktetg nknevnanfp
      121 igdleeeekh kdcdlgdvkk tqihfdsevi qikagkaeid rrisafierk qaeinennvr
      181 efcnvidcnq enscartdai ftpypgfksh vkvsrvvnty gpqtrsegiq gsghkpnsml
      241 rdcgnqavee rlqnieahlr lqtggpvprd iyqrikkled rilelegisp eyfqsvnfsg
      301 krrkvqppqn yslaeldeki salkqallrk sretesmatr hlp
//
LOCUS       XP_061015169             282 aa            linear   MAM 02-DEC-2023
DEFINITION  MAP3K12-binding inhibitory protein 1 isoform X3 [Dama dama].
ACCESSION   XP_061015169
VERSION     XP_061015169.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159186.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..282
                     /product="MAP3K12-binding inhibitory protein 1 isoform X3"
                     /calculated_mol_wt=31619
     CDS             1..282
                     /gene="MBIP"
                     /coded_by="XM_061159186.1:76..924"
                     /db_xref="GeneID:133068120"
ORIGIN      
        1 maaaaelsrp tigdrslers cspslsrdiv cevfrslqnl agqlnlrddv vkitidwnkl
       61 qsvsalqpaf lfsaleqhvl ylqpflaklq plikeenttv veeigktetg nknevnanfp
      121 igdleeeekh kdcdlgdvkk tqihfdsevi qikagkaeid rrisafierk qaeinennvr
      181 efcnvidcnq enscartdai ftpypgfksh vkvsrvvnty gpqtrsegiq gsghkpnsml
      241 rdcgnqavee rlqnieahlr lqtelfwkkk kssttstelf tg
//
LOCUS       XP_061015170             342 aa            linear   MAM 02-DEC-2023
DEFINITION  paired box protein Pax-9 [Dama dama].
ACCESSION   XP_061015170
VERSION     XP_061015170.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159187.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..342
                     /product="paired box protein Pax-9"
                     /calculated_mol_wt=36263
     Region          6..131
                     /region_name="PAX"
                     /note="Paired Box domain; cd00131"
                     /db_xref="CDD:238076"
     Site            order(9..10,15,17..19,21,26,38,40,49,52,54..55,59,68..74,
                     76..79,98..100,119,121..122,125,128)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238076"
     CDS             1..342
                     /gene="PAX9"
                     /coded_by="XM_061159187.1:221..1249"
                     /db_xref="GeneID:133068121"
ORIGIN      
        1 mepafgevnq lggvfvngrp lpnairlriv elaqlgirpc disrqlrvsh gcvskilary
       61 netgsilpga iggskprvtt ptvvkhirty kqrdpgifaw eirdrlladg vcdkynvpsv
      121 ssisrilrnk ignlaqqghy dsykqhqpap qpalpynhiy sypspitaaa akvptppgvp
      181 aipgsvampr twpsshsvtd ilgirsitdq gvsdsspyhs pkveewsslg rsnfpaaaph
      241 avnglekgal eqeakyaqap nglpavssfv sassmapypt paqvspymty saapsgyvag
      301 hgwqhasgtp lsphncdipa slafkgmqaa regshsvtas al
//
LOCUS       XP_061015171             299 aa            linear   MAM 02-DEC-2023
DEFINITION  mitochondrial 2-oxodicarboxylate carrier isoform X1 [Dama dama].
ACCESSION   XP_061015171
VERSION     XP_061015171.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159188.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..299
                     /product="mitochondrial 2-oxodicarboxylate carrier isoform
                     X1"
                     /calculated_mol_wt=33022
     Region          15..105
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          105..197
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          204..298
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     CDS             1..299
                     /gene="SLC25A21"
                     /coded_by="XM_061159188.1:126..1025"
                     /db_xref="GeneID:133068122"
ORIGIN      
        1 msakpsvgfv neasrqilag gsaglveicl mhpldvvktr fqiqrcatdp nsykslgdsf
       61 rmilrteglf gfykgiippi laetpkravk fftfeqykkl lgyvslspal tfaiaglgsg
      121 lteaivvnpf evvkvglqan rnrfteqpst vsyarhiikk eglglrglnk gftatlgrhg
      181 vfnmvyfgfy fnvkniipvn qdptleflrk fgigllsgti asvinipfdv aksriqgpqp
      241 vpgeikyrtc fktmatvyqe egilalykgl lpkimrlgpg gavmllvyey tyswlqenw
//
LOCUS       XP_061015172             269 aa            linear   MAM 02-DEC-2023
DEFINITION  mitochondrial 2-oxodicarboxylate carrier isoform X2 [Dama dama].
ACCESSION   XP_061015172
VERSION     XP_061015172.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159189.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..269
                     /product="mitochondrial 2-oxodicarboxylate carrier isoform
                     X2"
                     /calculated_mol_wt=30034
     Region          <1..75
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          75..167
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          174..268
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     CDS             1..269
                     /gene="SLC25A21"
                     /coded_by="XM_061159189.1:61..870"
                     /db_xref="GeneID:133068122"
ORIGIN      
        1 mhpldvvktr fqiqrcatdp nsykslgdsf rmilrteglf gfykgiippi laetpkravk
       61 fftfeqykkl lgyvslspal tfaiaglgsg lteaivvnpf evvkvglqan rnrfteqpst
      121 vsyarhiikk eglglrglnk gftatlgrhg vfnmvyfgfy fnvkniipvn qdptleflrk
      181 fgigllsgti asvinipfdv aksriqgpqp vpgeikyrtc fktmatvyqe egilalykgl
      241 lpkimrlgpg gavmllvyey tyswlqenw
//
LOCUS       XP_061015173             497 aa            linear   MAM 02-DEC-2023
DEFINITION  mirror-image polydactyly gene 1 protein [Dama dama].
ACCESSION   XP_061015173
VERSION     XP_061015173.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159190.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..497
                     /product="mirror-image polydactyly gene 1 protein"
                     /calculated_mol_wt=56442
     Region          <168..>485
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..497
                     /gene="MIPOL1"
                     /coded_by="XM_061159190.1:44..1537"
                     /db_xref="GeneID:133068123"
ORIGIN      
        1 mgsqessyti lssnlgaktr dvaranknrs angglvqrnl hclyfiiswy isasgqccis
       61 pdithsyleq ettgtnkntq pdeqlpvnsk gsmhqksnel vneatyeste lpeqrsrnfq
      121 visphpgdet ayctagksnf mdhrnsdlhc ectipcqvts dlskeetial llkeldslka
      181 snkklqekls kedkehrklk lklelqekat eaqiaektaa lveevylaqk erdeaimsrl
      241 qlanderdea iarakdmems lklleninpe endmtlqell nrinnadtgv aiqkngaiiv
      301 driyktkeck kritaeemna vieerdaals qckrleqelh hlkerkqtsa nnmrhltaen
      361 nqeralkakl lamqqareta vqqykkleee iqtlrvyysl hkslsqeenl keqfnltlst
      421 feealknren ivsitqqqne elatqlqqal tdranmelal qhaveasrta ndkvqklerl
      481 vdvlrkkvgt gtmrtvi
//
LOCUS       XP_061015174             469 aa            linear   MAM 02-DEC-2023
DEFINITION  hepatocyte nuclear factor 3-alpha [Dama dama].
ACCESSION   XP_061015174
VERSION     XP_061015174.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159191.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..469
                     /product="hepatocyte nuclear factor 3-alpha"
                     /calculated_mol_wt=48683
     Region          17..169
                     /region_name="Forkhead_N"
                     /note="Forkhead N-terminal region; pfam08430"
                     /db_xref="CDD:369872"
     Region          157..268
                     /region_name="FH_FOXA1"
                     /note="Forkhead (FH) domain found in Forkhead box protein
                     A1 (FOXA1) and similar proteins; cd20038"
                     /db_xref="CDD:410812"
     Site            order(174..175,193,213,216..217,219..220,223,230,241..242,
                     244,260..262,264..265)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410812"
     Region          394..458
                     /region_name="HNF_C"
                     /note="HNF3 C-terminal domain; pfam09354"
                     /db_xref="CDD:430552"
     CDS             1..469
                     /gene="FOXA1"
                     /coded_by="XM_061159191.1:124..1533"
                     /db_xref="GeneID:133068124"
ORIGIN      
        1 mlgtvkmegh essdwnsyya dtqeayssvp vsnmnsglgt mnsmntymtm nsmstsgnmt
       61 pasfnmsyan pglgaglspg avagmpggsa gamnsmtagv tamgttlspg gmgamgaqpa
      121 asmnglgpya aamnpcmspm ayapsnlgrs ragggggdak tfkrsyphak ppysyislit
      181 maiqqapskm ltlseiyqwi mdlfpyyrqn qqrwqnsirh slsfndcfvk varspdkpgk
      241 gsywtlhpds gnmfengcyl rrqkrfkcek qpgpgggsgg gggpkggpes rkdpssaanp
      301 sadsplhrgv hgkagqlega papgpaaspq tldhgaaaat ggaselktpa tsaappissg
      361 pgalvsvpps hpahalaphe sqlhmkgdph ysfnhpfsin nlmssseqqh kldfkayeqa
      421 lqyspygsal paslplggas vatrspieps alepayyqgv ysrpvlnts
//
LOCUS       XP_061015175             390 aa            linear   MAM 02-DEC-2023
DEFINITION  somatostatin receptor type 1 isoform X1 [Dama dama].
ACCESSION   XP_061015175
VERSION     XP_061015175.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159192.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..390
                     /product="somatostatin receptor type 1 isoform X1"
                     /calculated_mol_wt=42468
     Region          58..333
                     /region_name="7tmA_SSTR1"
                     /note="somatostatin receptor type 1, member of the class A
                     family of seven-transmembrane G protein-coupled receptors;
                     cd15970"
                     /db_xref="CDD:320636"
     Region          59..85
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320636"
     Region          92..118
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320636"
     Site            order(113,116..117,129..134,136..137,140,185,187..191,219,
                     222..224,226..228,230..231,283,286..287,289..290,293,
                     300..301,303..305,308,311..312)
                     /site_type="other"
                     /note="putative peptide ligand binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:320636"
     Region          129..159
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320636"
     Region          171..193
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320636"
     Region          219..248
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320636"
     Region          263..293
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320636"
     Region          301..326
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320636"
     CDS             1..390
                     /gene="SSTR1"
                     /coded_by="XM_061159192.1:46..1218"
                     /db_xref="GeneID:133068125"
ORIGIN      
        1 mfpngtassp sspspspgsc gegggsrgpg agaadgmeep grnasqngtl segqgsaili
       61 sfiysvvclv glcgnsmviy vilryakmkt atniyilnla iadellmlsv pflvtstllr
      121 hwpfgallcr lvlsvdavnm ftsiycltvl svdryvavvh pikaaryrrp tvakvvnlgv
      181 wvlsllvilp ivvfsrtaan sdgtvacnml mpepaqrwlv gfvlytflmg fllpvgaicl
      241 cyvliiakmr mvalkagwqq rkrserkitl mvmmvvmvfv icwmpfyvvq lvnvfaeqdd
      301 atvsqlsvil gyanscanpi lygflsdnfk rsfqrilcls wmdnaaeepv dyyatalksr
      361 aysvedfqpe nlesggvfrn gtctsrittl
//
LOCUS       XP_061015176             354 aa            linear   MAM 02-DEC-2023
DEFINITION  somatostatin receptor type 1 isoform X2 [Dama dama].
ACCESSION   XP_061015176
VERSION     XP_061015176.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159193.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..354
                     /product="somatostatin receptor type 1 isoform X2"
                     /calculated_mol_wt=39337
     Region          22..297
                     /region_name="7tmA_SSTR1"
                     /note="somatostatin receptor type 1, member of the class A
                     family of seven-transmembrane G protein-coupled receptors;
                     cd15970"
                     /db_xref="CDD:320636"
     Region          23..49
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320636"
     Region          56..82
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320636"
     Site            order(77,80..81,93..98,100..101,104,149,151..155,183,
                     186..188,190..192,194..195,247,250..251,253..254,257,
                     264..265,267..269,272,275..276)
                     /site_type="other"
                     /note="putative peptide ligand binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:320636"
     Region          93..123
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320636"
     Region          135..157
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320636"
     Region          183..212
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320636"
     Region          227..257
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320636"
     Region          265..290
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320636"
     CDS             1..354
                     /gene="SSTR1"
                     /coded_by="XM_061159193.1:414..1478"
                     /db_xref="GeneID:133068125"
ORIGIN      
        1 meepgrnasq ngtlsegqgs ailisfiysv vclvglcgns mviyvilrya kmktatniyi
       61 lnlaiadell mlsvpflvts tllrhwpfga llcrlvlsvd avnmftsiyc ltvlsvdryv
      121 avvhpikaar yrrptvakvv nlgvwvlsll vilpivvfsr taansdgtva cnmlmpepaq
      181 rwlvgfvlyt flmgfllpvg aiclcyvlii akmrmvalka gwqqrkrser kitlmvmmvv
      241 mvfvicwmpf yvvqlvnvfa eqddatvsql svilgyansc anpilygfls dnfkrsfqri
      301 lclswmdnaa eepvdyyata lksraysved fqpenlesgg vfrngtctsr ittl
//
LOCUS       XP_061015177             485 aa            linear   MAM 02-DEC-2023
DEFINITION  C-type lectin domain family 14 member A [Dama dama].
ACCESSION   XP_061015177
VERSION     XP_061015177.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159194.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..485
                     /product="C-type lectin domain family 14 member A"
                     /calculated_mol_wt=50758
     Region          33..175
                     /region_name="CLECT"
                     /note="C-type lectin (CTL)/C-type lectin-like (CTLD)
                     domain; cl02432"
                     /db_xref="CDD:470576"
     Site            order(141,145,147,156,158..161,165..167)
                     /site_type="other"
                     /note="ligand binding surface [chemical binding]"
                     /db_xref="CDD:153057"
     Region          255..287
                     /region_name="FXa_inhibition"
                     /note="Coagulation Factor Xa inhibitory site; pfam14670"
                     /db_xref="CDD:464251"
     CDS             1..485
                     /gene="CLEC14A"
                     /coded_by="XM_061159194.1:523..1980"
                     /db_xref="GeneID:133068128"
ORIGIN      
        1 mrpaialwfl wqafwpqlgr gehptadrag clasgvcysl hhatfkrqea qeactlrhgv
       61 lstvrggael ravlallrag pgpgggskdl lfwvalerrr sdctlenepl rgfswlspdv
      121 ggsesdtlqw veeparscta rkcaglqatg giepagwrem rchqradgyl ckyqfqslcp
      181 aprpgaasnl syrapfqlhs atldfsppgt evsalcpgql svtatctade vgarwegmps
      241 gavlcpcpgr ylragkcael pdclddvggf acecaagfvl gkdgrscvtk gegqptpggt
      301 qvltwhppat aaslapkgtw spsvqerpge ipnapgqgsa tasfpeiprw gaqstlstlq
      361 mspqtevkad vnssgtafpk vnatspsdnp qafdsstvvf vlvsmavvvl viltvtvlgl
      421 fklcfhksps pqqrkeplas pgkegdaeaa plssgsarct dngmkagdcg lrasvsgssl
      481 gsgdt
//
LOCUS       XP_061015178             765 aa            linear   MAM 02-DEC-2023
DEFINITION  protein transport protein Sec23A [Dama dama].
ACCESSION   XP_061015178
VERSION     XP_061015178.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159195.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..765
                     /product="protein transport protein Sec23A"
                     /calculated_mol_wt=86024
     Region          12..763
                     /region_name="PLN00162"
                     /note="transport protein sec23; Provisional"
                     /db_xref="CDD:215083"
     CDS             1..765
                     /gene="SEC23A"
                     /coded_by="XM_061159195.1:212..2509"
                     /db_xref="GeneID:133068129"
ORIGIN      
        1 mttylefiqq neerdgvrfs wnvwpssrle atrmvvpvaa lftplkerpd lppiqyepvl
       61 csrttcravl nplcqvdyra klwacnfcyq rnqfpptyag iselnqpael lpqfssieyv
      121 vlrgpqmpli flyvvdtcme dedlqalkes mqmslsllpp talvglitfg rmvqvhelgc
      181 egisksyvfr gtkdlsakql qemlglskvp vtqatrgpqv qqpppsnrfl qpvqkidmnl
      241 tdllgelqrd pwpvpqgkrp lrssgvalsi avgllectfp ntgarimmfi ggpatqgpgm
      301 vvgdelktpi rswhdiekdn akyvkkgtkh fealanraat tghvidiyac aldqtgllem
      361 kccpnltggy mvmgdsfnts lfkqtfqrvf tkdmhgqfkm gfggtleikt sreikisgai
      421 gpcvslnskg pcvseneigt ggtcqwkicg lsptttlaiy fevvnqhnap ipqggrgaiq
      481 fvtqyqhssg qrrirvttia rnwadaqtqi qniaasfdqe aaailmarla iyraeteegp
      541 dvlrwldrql irlcqkfgey hkddpgsfrf setfslypqf mfhlrrspfl qvfnnspdes
      601 syyrhhfmrq dltqslimiq pilyaysfsg ppepvlldss siladrillm dtffqiliyh
      661 getiaqwrks gyqdmpeyen frhllqapvd daqeilhsrf pmpryidteh ggsqarflls
      721 kvnpsqthnn myawgqesga piltddvslq vfmdhlkkla vssaa
//
LOCUS       XP_061015179             765 aa            linear   MAM 02-DEC-2023
DEFINITION  protein transport protein Sec23A [Dama dama].
ACCESSION   XP_061015179
VERSION     XP_061015179.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159196.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..765
                     /product="protein transport protein Sec23A"
                     /calculated_mol_wt=86024
     Region          12..763
                     /region_name="PLN00162"
                     /note="transport protein sec23; Provisional"
                     /db_xref="CDD:215083"
     CDS             1..765
                     /gene="SEC23A"
                     /coded_by="XM_061159196.1:212..2509"
                     /db_xref="GeneID:133068129"
ORIGIN      
        1 mttylefiqq neerdgvrfs wnvwpssrle atrmvvpvaa lftplkerpd lppiqyepvl
       61 csrttcravl nplcqvdyra klwacnfcyq rnqfpptyag iselnqpael lpqfssieyv
      121 vlrgpqmpli flyvvdtcme dedlqalkes mqmslsllpp talvglitfg rmvqvhelgc
      181 egisksyvfr gtkdlsakql qemlglskvp vtqatrgpqv qqpppsnrfl qpvqkidmnl
      241 tdllgelqrd pwpvpqgkrp lrssgvalsi avgllectfp ntgarimmfi ggpatqgpgm
      301 vvgdelktpi rswhdiekdn akyvkkgtkh fealanraat tghvidiyac aldqtgllem
      361 kccpnltggy mvmgdsfnts lfkqtfqrvf tkdmhgqfkm gfggtleikt sreikisgai
      421 gpcvslnskg pcvseneigt ggtcqwkicg lsptttlaiy fevvnqhnap ipqggrgaiq
      481 fvtqyqhssg qrrirvttia rnwadaqtqi qniaasfdqe aaailmarla iyraeteegp
      541 dvlrwldrql irlcqkfgey hkddpgsfrf setfslypqf mfhlrrspfl qvfnnspdes
      601 syyrhhfmrq dltqslimiq pilyaysfsg ppepvlldss siladrillm dtffqiliyh
      661 getiaqwrks gyqdmpeyen frhllqapvd daqeilhsrf pmpryidteh ggsqarflls
      721 kvnpsqthnn myawgqesga piltddvslq vfmdhlkkla vssaa
//
LOCUS       XP_061015180             765 aa            linear   MAM 02-DEC-2023
DEFINITION  protein transport protein Sec23A [Dama dama].
ACCESSION   XP_061015180
VERSION     XP_061015180.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159197.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..765
                     /product="protein transport protein Sec23A"
                     /calculated_mol_wt=86024
     Region          12..763
                     /region_name="PLN00162"
                     /note="transport protein sec23; Provisional"
                     /db_xref="CDD:215083"
     CDS             1..765
                     /gene="SEC23A"
                     /coded_by="XM_061159197.1:176..2473"
                     /db_xref="GeneID:133068129"
ORIGIN      
        1 mttylefiqq neerdgvrfs wnvwpssrle atrmvvpvaa lftplkerpd lppiqyepvl
       61 csrttcravl nplcqvdyra klwacnfcyq rnqfpptyag iselnqpael lpqfssieyv
      121 vlrgpqmpli flyvvdtcme dedlqalkes mqmslsllpp talvglitfg rmvqvhelgc
      181 egisksyvfr gtkdlsakql qemlglskvp vtqatrgpqv qqpppsnrfl qpvqkidmnl
      241 tdllgelqrd pwpvpqgkrp lrssgvalsi avgllectfp ntgarimmfi ggpatqgpgm
      301 vvgdelktpi rswhdiekdn akyvkkgtkh fealanraat tghvidiyac aldqtgllem
      361 kccpnltggy mvmgdsfnts lfkqtfqrvf tkdmhgqfkm gfggtleikt sreikisgai
      421 gpcvslnskg pcvseneigt ggtcqwkicg lsptttlaiy fevvnqhnap ipqggrgaiq
      481 fvtqyqhssg qrrirvttia rnwadaqtqi qniaasfdqe aaailmarla iyraeteegp
      541 dvlrwldrql irlcqkfgey hkddpgsfrf setfslypqf mfhlrrspfl qvfnnspdes
      601 syyrhhfmrq dltqslimiq pilyaysfsg ppepvlldss siladrillm dtffqiliyh
      661 getiaqwrks gyqdmpeyen frhllqapvd daqeilhsrf pmpryidteh ggsqarflls
      721 kvnpsqthnn myawgqesga piltddvslq vfmdhlkkla vssaa
//
LOCUS       XP_061015182             280 aa            linear   MAM 02-DEC-2023
DEFINITION  gem-associated protein 2 [Dama dama].
ACCESSION   XP_061015182
VERSION     XP_061015182.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159199.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..280
                     /product="gem-associated protein 2"
                     /calculated_mol_wt=31390
     Region          38..273
                     /region_name="SIP1"
                     /note="Survival motor neuron (SMN) interacting protein 1
                     (SIP1); pfam04938"
                     /db_xref="CDD:461493"
     CDS             1..280
                     /gene="GEMIN2"
                     /coded_by="XM_061159199.1:11..853"
                     /db_xref="GeneID:133068131"
ORIGIN      
        1 mrgvgrsslk tmawvpaesa veelmprllp vepcdltesf dpsvppstpq eylrrvqiea
       61 aqcpdvvvaq idpkklkrkq svnvslsgcq papegysptl qwqqqqvaqf stvrqsvnrh
      121 rshwksqqld snvtmpksed eegwkkfclg erlcaegaig paasespgid yvqigfppll
      181 sivsrmnqst vtsvleylnn wfgerdftpe lgrwlyalla clekpllpea hslirqlarr
      241 csevrllvds kddervpaln lliclvsryf dqrdladeps
//
LOCUS       XP_061015183             158 aa            linear   MAM 02-DEC-2023
DEFINITION  trafficking protein particle complex subunit 6B isoform X1 [Dama
            dama].
ACCESSION   XP_061015183
VERSION     XP_061015183.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159200.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..158
                     /product="trafficking protein particle complex subunit 6B
                     isoform X1"
                     /calculated_mol_wt=17852
     Region          3..156
                     /region_name="TRAPPC6A_Trs33"
                     /note="Trs33 subunit of the TRAPP complex; cd14944"
                     /db_xref="CDD:271347"
     Site            order(5,8,12,103..104,114,118)
                     /site_type="other"
                     /note="synbindin interface [polypeptide binding]"
                     /db_xref="CDD:271347"
     Site            order(6..7,9..11,13..14,17,35,39,42..43,46..47,50,75,78,
                     98,121)
                     /site_type="other"
                     /note="BET3 interface [polypeptide binding]"
                     /db_xref="CDD:271347"
     CDS             1..158
                     /gene="TRAPPC6B"
                     /coded_by="XM_061159200.1:292..768"
                     /db_xref="GeneID:133068132"
ORIGIN      
        1 madealflll hnemvsgvyk saeqgeveng rcitklenmg frvgqglier ftkdtarfkd
       61 eldimkfick dfwttvfkkq idnlrtnhqg iyvlqdnkfr lltqmsagkq ylehaskyla
      121 ftcglirggl snlgiksivt aevssmpack fqvmiqkl
//
LOCUS       XP_061015184             147 aa            linear   MAM 02-DEC-2023
DEFINITION  trafficking protein particle complex subunit 6B isoform X2 [Dama
            dama].
ACCESSION   XP_061015184
VERSION     XP_061015184.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159201.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..147
                     /product="trafficking protein particle complex subunit 6B
                     isoform X2"
                     /calculated_mol_wt=16699
     Region          <22..145
                     /region_name="TRAPPC6A_Trs33"
                     /note="Trs33 subunit of the TRAPP complex; cd14944"
                     /db_xref="CDD:271347"
     CDS             1..147
                     /gene="TRAPPC6B"
                     /coded_by="XM_061159201.1:16..459"
                     /db_xref="GeneID:133068132"
ORIGIN      
        1 mplvasrsvd elvhfqengr citklenmgf rvgqglierf tkdtarfkde ldimkfickd
       61 fwttvfkkqi dnlrtnhqgi yvlqdnkfrl ltqmsagkqy lehaskylaf tcglirggls
      121 nlgiksivta evssmpackf qvmiqkl
//
LOCUS       XP_061015185             721 aa            linear   MAM 02-DEC-2023
DEFINITION  pinin [Dama dama].
ACCESSION   XP_061015185
VERSION     XP_061015185.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159202.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..721
                     /product="pinin"
                     /calculated_mol_wt=81879
     Region          1..130
                     /region_name="Pinin_SDK_N"
                     /note="pinin/SDK conserved region; pfam04697"
                     /db_xref="CDD:461397"
     Region          136..261
                     /region_name="Pinin_SDK_memA"
                     /note="pinin/SDK/memA/ protein conserved region;
                     pfam04696"
                     /db_xref="CDD:461396"
     CDS             1..721
                     /gene="PNN"
                     /coded_by="XM_061159202.1:66..2231"
                     /db_xref="GeneID:133068133"
ORIGIN      
        1 mavavrtlqe qlekakeslk nvdenirklt grdpndvrpi qarllalsgp gggrgrgsll
       61 lrrgfsdsgg gppakqrdle gavsrlgger rtrresrqes dpedddvkkp alqssvvats
      121 kertrrdliq dqnmdekgkq rnrrifgllm gtlqkfkqes tvaterqkrr qeieqklevq
      181 aeeerkqven errelfeerr akqtelrlle qkvelaqlqe ewnehnakii kyirtktkph
      241 lfyipgrmcp atqklieesq rkmnalfegr riefaeqink mearprrqsm kekehqvvvr
      301 neeqkseqee gkvaqreeel eetgnqhndv eieeageeee keigivhsda ekeqeeeeqk
      361 qemevkmeee tevresekqq dsqpeevmdv lemvesvknv iaeqevmein qvesiepsen
      421 etskelepem efevepdkec ksvspakena stlemenepe ekeekesepq pepmaqpqsl
      481 pqpqpqsqpq sqsqpqqvlq pqplsqpenl plavsqpppq vvqeqghlpp erkeflvesv
      541 kltevtepvl tvhsesknkt ktrsrsrgra rnktsksrsr ssssssssss stssssgsss
      601 ssgssssrss ssssssssgs ssrdsssstt sssesrsrsr grghnrdrkh rrsvdrkrrd
      661 asglershks skggsgrdak gskdknsrsd rkrsisessr sgkrssrser drksdrkdkr
      721 r
//
LOCUS       XP_061015186            1416 aa            linear   MAM 02-DEC-2023
DEFINITION  melanoma inhibitory activity protein 2 isoform X1 [Dama dama].
ACCESSION   XP_061015186
VERSION     XP_061015186.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159203.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1416
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1416
                     /product="melanoma inhibitory activity protein 2 isoform
                     X1"
                     /calculated_mol_wt=161472
     Region          31..103
                     /region_name="SH3_MIA2"
                     /note="Src Homology 3 domain of Melanoma Inhibitory
                     Activity 2 protein; cd11892"
                     /db_xref="CDD:212825"
     Site            order(48..50,53..57,78..79,90..92,94..95)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:212825"
     Region          <752..1056
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1416
                     /gene="MIA2"
                     /coded_by="XM_061159203.1:210..4460"
                     /db_xref="GeneID:133068135"
ORIGIN      
        1 madlkvhrif llvislttcl estklladlk kcgdlecetl isrvsairdy rgpdcrylnf
       61 tkgeeisvyv klsgkredlw agskgkdfgy fprdavqieq vfiseevqip tkesdffcll
      121 ginyvfenea selnsdnsen mypyeedndp kssvyendfq iepgfystse gslfedqfpa
      181 seapedirst sqsedweaea gsmeqylipe gdhvplsstv pevkewfgfg kdqteektfe
      241 sviepqeess frsrqtaved gndpeelnsg kpqtehkqel esefdsvpke qselvseseh
      301 ifnpqdtgwf gggftsylgf ggedtelell skesnppled vpssisseee ptvrcteilt
      361 ekediitnns silkpswfdf gfamlgfaya nedkmisddg ineeggvvdk hrhpstsefd
      421 pheeqeikli kitetenqiv kervlektdd sdtvpyfkkl lykfnnrwrf qntpketelt
      481 fpkqtldesn igendkteef saekyptdni edmlksdysq pdmdseiefp mgiheeahfk
      541 tlssensdek lktsldterp tqvemdtsme ntlsnsqill tdnslspqny ivkkedaswc
      601 qlleylfqid vydflnsafs pivilierav aalpedmrqs nlygfpwelv icativgffa
      661 vllflwrsfr svrsrlyvgr ekklavelst lieekcklle kfsivqkeye glesslkdan
      721 fekesteaqs lefvegsqis eafceklngf kseledeili lekelkeeks khskqdelms
      781 diskriqsle deskslksqv aeakttfkif qmneerlkia ikdalsensq lqesqkqllq
      841 eaeelreqvn elnkqkitfe dykvhveqvl cdkenqiksl terlrkmkdw tavlgeditd
      901 ddnlewemks dsendayldn qpkgalkkli haaklraslk tlegernqiy tqlsevdktk
      961 eelteciknl qteqaslqse ntqfesetqk lqqklkvmte lyqenemilh rkltmeenyr
     1021 lekeeklska dekinhaaee letyrkrakd leeelertih syqgqiishe kkahdnwlaa
     1081 rtaernlndl rkenahnrqk ltetefkiel lekdpyaldv pntafgrehs pygpsplgrp
     1141 spemraflsp ptllegplrl spllpggggr gsrgpgnpld hpitnerges nsdrltdphr
     1201 assdtgslsp pweqdrrmmi ppsgqpypdp vlpqrqdrfy snsgrlsgpa elrsfnmpsl
     1261 dktdgpvsse messrneskd dlgnlnvpds slpieseatg pgfvppprpp vrvplfpmdt
     1321 rgpfirrgpp fpppppgsmy gaprdyfppr dfpgpppppf amrnvypprg fphyllprag
     1381 ffpppphpes rseipsglip psnepttehp eppqet
//
LOCUS       XP_061015187            1407 aa            linear   MAM 02-DEC-2023
DEFINITION  melanoma inhibitory activity protein 2 isoform X2 [Dama dama].
ACCESSION   XP_061015187
VERSION     XP_061015187.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159204.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1407
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1407
                     /product="melanoma inhibitory activity protein 2 isoform
                     X2"
                     /calculated_mol_wt=160495
     Region          31..103
                     /region_name="SH3_MIA2"
                     /note="Src Homology 3 domain of Melanoma Inhibitory
                     Activity 2 protein; cd11892"
                     /db_xref="CDD:212825"
     Site            order(48..50,53..57,78..79,90..92,94..95)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:212825"
     Region          687..>984
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     Region          <923..>1105
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1407
                     /gene="MIA2"
                     /coded_by="XM_061159204.1:210..4433"
                     /db_xref="GeneID:133068135"
ORIGIN      
        1 madlkvhrif llvislttcl estklladlk kcgdlecetl isrvsairdy rgpdcrylnf
       61 tkgeeisvyv klsgkredlw agskgkdfgy fprdavqieq vfiseevqip tkesdffcll
      121 ginyvfenea selnsdnsen mypyeedndp kssvyendfq iepgfystse gslfedqfpa
      181 seapedirst sqsedweaea gsmeqylipe gdhvplsstv pevkewfgfg kdqteektfe
      241 sviepqeess frsrqtaved gndpeelnsg kpqtehkqel esefdsvpke qselvseseh
      301 ifnpqdtgwf gggftsylgf ggedtelell skesnppled vpssisseee ptvrcteilt
      361 ekediitnns silkpswfdf gfamlgfaya nedkmisddg ineeggvvdk hrhpstsefd
      421 pheeqeikli kitetenqiv kervlektdd sdtvpyfkkl lykfnnrwrf qntpketelt
      481 fpkqtldesn igendkteef saekyptdni edmlksdysq pdmdseiefp mgiheeahfk
      541 tlssensdek lktsldterp tqvemdtsme ntlsnsqill tdnslspqny ivkkedaswc
      601 qlleylfqid vydflnsafs pivilierav aalpedmrqs nlygfpwelv icativgffa
      661 vllflwrsfr svrsrlyvgr ekklavelst lieekcklle kfsivqkeye glesslkdan
      721 fekesteaqs leafceklng fkseledeil ilekelkeek skhskqdelm sdiskriqsl
      781 edeskslksq vaeakttfki fqmneerlki aikdalsens qlqesqkqll qeaeelreqv
      841 nelnkqkitf edykvhveqv lcdkenqiks lterlrkmkd wtavlgedit dddnlewemk
      901 sdsendayld nqpkgalkkl ihaaklrasl ktlegernqi ytqlsevdkt keeltecikn
      961 lqteqaslqs entqfesetq klqqklkvmt elyqenemil hrkltmeeny rlekeeklsk
     1021 adekinhaae eletyrkrak dleeelerti hsyqgqiish ekkahdnwla artaernlnd
     1081 lrkenahnrq kltetefkie llekdpyald vpntafgreh spygpsplgr pspemrafls
     1141 pptllegplr lspllpgggg rgsrgpgnpl dhpitnerge snsdrltdph rassdtgsls
     1201 ppweqdrrmm ippsgqpypd pvlpqrqdrf ysnsgrlsgp aelrsfnmps ldktdgpvss
     1261 emessrnesk ddlgnlnvpd sslpieseat gpgfvppprp pvrvplfpmd trgpfirrgp
     1321 pfpppppgsm ygaprdyfpp rdfpgppppp famrnvyppr gfphyllpra gffpppphpe
     1381 srseipsgli ppsneptteh peppqet
//
LOCUS       XP_061015188            1373 aa            linear   MAM 02-DEC-2023
DEFINITION  melanoma inhibitory activity protein 2 isoform X3 [Dama dama].
ACCESSION   XP_061015188
VERSION     XP_061015188.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159205.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1373
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1373
                     /product="melanoma inhibitory activity protein 2 isoform
                     X3"
                     /calculated_mol_wt=156998
     Region          31..103
                     /region_name="SH3_MIA2"
                     /note="Src Homology 3 domain of Melanoma Inhibitory
                     Activity 2 protein; cd11892"
                     /db_xref="CDD:212825"
     Site            order(48..50,53..57,78..79,90..92,94..95)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:212825"
     Region          <752..1056
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1373
                     /gene="MIA2"
                     /coded_by="XM_061159205.1:211..4332"
                     /db_xref="GeneID:133068135"
ORIGIN      
        1 madlkvhrif llvislttcl estklladlk kcgdlecetl isrvsairdy rgpdcrylnf
       61 tkgeeisvyv klsgkredlw agskgkdfgy fprdavqieq vfiseevqip tkesdffcll
      121 ginyvfenea selnsdnsen mypyeedndp kssvyendfq iepgfystse gslfedqfpa
      181 seapedirst sqsedweaea gsmeqylipe gdhvplsstv pevkewfgfg kdqteektfe
      241 sviepqeess frsrqtaved gndpeelnsg kpqtehkqel esefdsvpke qselvseseh
      301 ifnpqdtgwf gggftsylgf ggedtelell skesnppled vpssisseee ptvrcteilt
      361 ekediitnns silkpswfdf gfamlgfaya nedkmisddg ineeggvvdk hrhpstsefd
      421 pheeqeikli kitetenqiv kervlektdd sdtvpyfkkl lykfnnrwrf qntpketelt
      481 fpkqtldesn igendkteef saekyptdni edmlksdysq pdmdseiefp mgiheeahfk
      541 tlssensdek lktsldterp tqvemdtsme ntlsnsqill tdnslspqny ivkkedaswc
      601 qlleylfqid vydflnsafs pivilierav aalpedmrqs nlygfpwelv icativgffa
      661 vllflwrsfr svrsrlyvgr ekklavelst lieekcklle kfsivqkeye glesslkdan
      721 fekesteaqs lefvegsqis eafceklngf kseledeili lekelkeeks khskqdelms
      781 diskriqsle deskslksqv aeakttfkif qmneerlkia ikdalsensq lqesqkqllq
      841 eaeelreqvn elnkqkitfe dykvhveqvl cdkenqiksl terlrkmkdw tavlgeditd
      901 ddnlewemks dsendayldn qpkgalkkli haaklraslk tlegernqiy tqlsevdktk
      961 eelteciknl qteqaslqse ntqfesetqk lqqklkvmte lyqenemilh rkltmeenyr
     1021 lekeeklska dekinhaaee letyrkrakd leeelertih syqgqiishe kkahdnwlaa
     1081 rtaernlndl rkenahnrqk ltetefkiel lekdpyaldv pntafgrgsr gpgnpldhpi
     1141 tnergesnsd rltdphrass dtgslsppwe qdrrmmipps gqpypdpvlp qrqdrfysns
     1201 grlsgpaelr sfnmpsldkt dgpvssemes srneskddlg nlnvpdsslp ieseatgpgf
     1261 vppprppvrv plfpmdtrgp firrgppfpp pppgsmygap rdyfpprdfp gpppppfamr
     1321 nvypprgfph yllpragffp ppphpesrse ipsglippsn epttehpepp qet
//
LOCUS       XP_061015189            1364 aa            linear   MAM 02-DEC-2023
DEFINITION  melanoma inhibitory activity protein 2 isoform X4 [Dama dama].
ACCESSION   XP_061015189
VERSION     XP_061015189.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159206.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1364
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1364
                     /product="melanoma inhibitory activity protein 2 isoform
                     X4"
                     /calculated_mol_wt=156021
     Region          31..103
                     /region_name="SH3_MIA2"
                     /note="Src Homology 3 domain of Melanoma Inhibitory
                     Activity 2 protein; cd11892"
                     /db_xref="CDD:212825"
     Site            order(48..50,53..57,78..79,90..92,94..95)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:212825"
     Region          687..>984
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     Region          <923..>1105
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1364
                     /gene="MIA2"
                     /coded_by="XM_061159206.1:210..4304"
                     /db_xref="GeneID:133068135"
ORIGIN      
        1 madlkvhrif llvislttcl estklladlk kcgdlecetl isrvsairdy rgpdcrylnf
       61 tkgeeisvyv klsgkredlw agskgkdfgy fprdavqieq vfiseevqip tkesdffcll
      121 ginyvfenea selnsdnsen mypyeedndp kssvyendfq iepgfystse gslfedqfpa
      181 seapedirst sqsedweaea gsmeqylipe gdhvplsstv pevkewfgfg kdqteektfe
      241 sviepqeess frsrqtaved gndpeelnsg kpqtehkqel esefdsvpke qselvseseh
      301 ifnpqdtgwf gggftsylgf ggedtelell skesnppled vpssisseee ptvrcteilt
      361 ekediitnns silkpswfdf gfamlgfaya nedkmisddg ineeggvvdk hrhpstsefd
      421 pheeqeikli kitetenqiv kervlektdd sdtvpyfkkl lykfnnrwrf qntpketelt
      481 fpkqtldesn igendkteef saekyptdni edmlksdysq pdmdseiefp mgiheeahfk
      541 tlssensdek lktsldterp tqvemdtsme ntlsnsqill tdnslspqny ivkkedaswc
      601 qlleylfqid vydflnsafs pivilierav aalpedmrqs nlygfpwelv icativgffa
      661 vllflwrsfr svrsrlyvgr ekklavelst lieekcklle kfsivqkeye glesslkdan
      721 fekesteaqs leafceklng fkseledeil ilekelkeek skhskqdelm sdiskriqsl
      781 edeskslksq vaeakttfki fqmneerlki aikdalsens qlqesqkqll qeaeelreqv
      841 nelnkqkitf edykvhveqv lcdkenqiks lterlrkmkd wtavlgedit dddnlewemk
      901 sdsendayld nqpkgalkkl ihaaklrasl ktlegernqi ytqlsevdkt keeltecikn
      961 lqteqaslqs entqfesetq klqqklkvmt elyqenemil hrkltmeeny rlekeeklsk
     1021 adekinhaae eletyrkrak dleeelerti hsyqgqiish ekkahdnwla artaernlnd
     1081 lrkenahnrq kltetefkie llekdpyald vpntafgrgs rgpgnpldhp itnergesns
     1141 drltdphras sdtgslsppw eqdrrmmipp sgqpypdpvl pqrqdrfysn sgrlsgpael
     1201 rsfnmpsldk tdgpvsseme ssrneskddl gnlnvpdssl pieseatgpg fvppprppvr
     1261 vplfpmdtrg pfirrgppfp ppppgsmyga prdyfpprdf pgpppppfam rnvypprgfp
     1321 hyllpragff pppphpesrs eipsglipps nepttehpep pqet
//
LOCUS       XP_061015190             894 aa            linear   MAM 02-DEC-2023
DEFINITION  melanoma inhibitory activity protein 2 isoform X5 [Dama dama].
ACCESSION   XP_061015190
VERSION     XP_061015190.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159207.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..894
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..894
                     /product="melanoma inhibitory activity protein 2 isoform
                     X5"
                     /calculated_mol_wt=101916
     Region          <230..534
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..894
                     /gene="MIA2"
                     /coded_by="XM_061159207.1:70..2754"
                     /db_xref="GeneID:133068135"
ORIGIN      
        1 mdseiefpmg iheeahfktl ssensdeklk tsldterptq vemdtsment lsnsqilltd
       61 nslspqnyiv kkedaswcql leylfqidvy dflnsafspi vilieravaa lpedmrqsnl
      121 ygfpwelvic ativgffavl lflwrsfrsv rsrlyvgrek klavelstli eekckllekf
      181 sivqkeyegl esslkdanfe kesteaqsle fvegsqisea fceklngfks eledeilile
      241 kelkeekskh skqdelmsdi skriqslede skslksqvae akttfkifqm neerlkiaik
      301 dalsensqlq esqkqllqea eelreqvnel nkqkitfedy kvhveqvlcd kenqikslte
      361 rlrkmkdwta vlgeditddd nlewemksds endayldnqp kgalkkliha aklraslktl
      421 egernqiytq lsevdktkee lteciknlqt eqaslqsent qfesetqklq qklkvmtely
      481 qenemilhrk ltmeenyrle keeklskade kinhaaeele tyrkrakdle eelertihsy
      541 qgqiishekk ahdnwlaart aernlndlrk enahnrqklt etefkielle kdpyaldvpn
      601 tafgrehspy gpsplgrpsp emraflsppt llegplrlsp llpggggrgs rgpgnpldhp
      661 itnergesns drltdphras sdtgslsppw eqdrrmmipp sgqpypdpvl pqrqdrfysn
      721 sgrlsgpael rsfnmpsldk tdgpvsseme ssrneskddl gnlnvpdssl pieseatgpg
      781 fvppprppvr vplfpmdtrg pfirrgppfp ppppgsmyga prdyfpprdf pgpppppfam
      841 rnvypprgfp hyllpragff pppphpesrs eipsglipps nepttehpep pqet
//
LOCUS       XP_061015191             809 aa            linear   MAM 02-DEC-2023
DEFINITION  melanoma inhibitory activity protein 2 isoform X6 [Dama dama].
ACCESSION   XP_061015191
VERSION     XP_061015191.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159208.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..809
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..809
                     /product="melanoma inhibitory activity protein 2 isoform
                     X6"
                     /calculated_mol_wt=91975
     Region          <70..506
                     /region_name="Mplasa_alph_rch"
                     /note="helix-rich Mycoplasma protein; TIGR04523"
                     /db_xref="CDD:275316"
     CDS             1..809
                     /gene="MIA2"
                     /coded_by="XM_061159208.1:185..2614"
                     /db_xref="GeneID:133068135"
ORIGIN      
        1 megpgsapqp ylglllaklr wavaalpedm rqsnlygfpw elvicativg ffavllflwr
       61 sfrsvrsrly vgrekklave lstlieekck llekfsivqk eyeglesslk danfekeste
      121 aqslefvegs qiseafcekl ngfkselede ililekelke ekskhskqde lmsdiskriq
      181 sledeskslk sqvaeakttf kifqmneerl kiaikdalse nsqlqesqkq llqeaeelre
      241 qvnelnkqki tfedykvhve qvlcdkenqi kslterlrkm kdwtavlged itdddnlewe
      301 mksdsenday ldnqpkgalk klihaaklra slktlegern qiytqlsevd ktkeelteci
      361 knlqteqasl qsentqfese tqklqqklkv mtelyqenem ilhrkltmee nyrlekeekl
      421 skadekinha aeeletyrkr akdleeeler tihsyqgqii shekkahdnw laartaernl
      481 ndlrkenahn rqkltetefk iellekdpya ldvpntafgr ehspygpspl grpspemraf
      541 lspptllegp lrlspllpgg ggrgsrgpgn pldhpitner gesnsdrltd phrassdtgs
      601 lsppweqdrr mmippsgqpy pdpvlpqrqd rfysnsgrls gpaelrsfnm psldktdgpv
      661 ssemessrne skddlgnlnv pdsslpiese atgpgfvppp rppvrvplfp mdtrgpfirr
      721 gppfpppppg smygaprdyf pprdfpgppp ppfamrnvyp prgfphyllp ragffpppph
      781 pesrseipsg lippsneptt ehpeppqet
//
LOCUS       XP_061015192             803 aa            linear   MAM 02-DEC-2023
DEFINITION  melanoma inhibitory activity protein 2 isoform X7 [Dama dama].
ACCESSION   XP_061015192
VERSION     XP_061015192.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159209.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..803
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..803
                     /product="melanoma inhibitory activity protein 2 isoform
                     X7"
                     /calculated_mol_wt=91081
     Region          <64..500
                     /region_name="Mplasa_alph_rch"
                     /note="helix-rich Mycoplasma protein; TIGR04523"
                     /db_xref="CDD:275316"
     CDS             1..803
                     /gene="MIA2"
                     /coded_by="XM_061159209.1:57..2468"
                     /db_xref="GeneID:133068135"
ORIGIN      
        1 mktavgfpgp asspgavaal pedmrqsnly gfpwelvica tivgffavll flwrsfrsvr
       61 srlyvgrekk lavelstlie ekckllekfs ivqkeyegle sslkdanfek esteaqslef
      121 vegsqiseaf ceklngfkse ledeililek elkeekskhs kqdelmsdis kriqsledes
      181 kslksqvaea kttfkifqmn eerlkiaikd alsensqlqe sqkqllqeae elreqvneln
      241 kqkitfedyk vhveqvlcdk enqikslter lrkmkdwtav lgeditdddn lewemksdse
      301 ndayldnqpk galkklihaa klraslktle gernqiytql sevdktkeel teciknlqte
      361 qaslqsentq fesetqklqq klkvmtelyq enemilhrkl tmeenyrlek eeklskadek
      421 inhaaeelet yrkrakdlee elertihsyq gqiishekka hdnwlaarta ernlndlrke
      481 nahnrqklte tefkiellek dpyaldvpnt afgrehspyg psplgrpspe mraflspptl
      541 legplrlspl lpggggrgsr gpgnpldhpi tnergesnsd rltdphrass dtgslsppwe
      601 qdrrmmipps gqpypdpvlp qrqdrfysns grlsgpaelr sfnmpsldkt dgpvssemes
      661 srneskddlg nlnvpdsslp ieseatgpgf vppprppvrv plfpmdtrgp firrgppfpp
      721 pppgsmygap rdyfpprdfp gpppppfamr nvypprgfph yllpragffp ppphpesrse
      781 ipsglippsn epttehpepp qet
//
LOCUS       XP_061015193             800 aa            linear   MAM 02-DEC-2023
DEFINITION  melanoma inhibitory activity protein 2 isoform X8 [Dama dama].
ACCESSION   XP_061015193
VERSION     XP_061015193.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159210.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..800
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..800
                     /product="melanoma inhibitory activity protein 2 isoform
                     X8"
                     /calculated_mol_wt=90998
     Region          80..>377
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     Region          <316..>498
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..800
                     /gene="MIA2"
                     /coded_by="XM_061159210.1:184..2586"
                     /db_xref="GeneID:133068135"
ORIGIN      
        1 megpgsapqp ylglllaklr wavaalpedm rqsnlygfpw elvicativg ffavllflwr
       61 sfrsvrsrly vgrekklave lstlieekck llekfsivqk eyeglesslk danfekeste
      121 aqsleafcek lngfkseled eililekelk eekskhskqd elmsdiskri qsledesksl
      181 ksqvaeaktt fkifqmneer lkiaikdals ensqlqesqk qllqeaeelr eqvnelnkqk
      241 itfedykvhv eqvlcdkenq ikslterlrk mkdwtavlge ditdddnlew emksdsenda
      301 yldnqpkgal kklihaaklr aslktleger nqiytqlsev dktkeeltec iknlqteqas
      361 lqsentqfes etqklqqklk vmtelyqene milhrkltme enyrlekeek lskadekinh
      421 aaeeletyrk rakdleeele rtihsyqgqi ishekkahdn wlaartaern lndlrkenah
      481 nrqkltetef kiellekdpy aldvpntafg rehspygpsp lgrpspemra flspptlleg
      541 plrlspllpg gggrgsrgpg npldhpitne rgesnsdrlt dphrassdtg slsppweqdr
      601 rmmippsgqp ypdpvlpqrq drfysnsgrl sgpaelrsfn mpsldktdgp vssemessrn
      661 eskddlgnln vpdsslpies eatgpgfvpp prppvrvplf pmdtrgpfir rgppfppppp
      721 gsmygaprdy fpprdfpgpp pppfamrnvy pprgfphyll pragffpppp hpesrseips
      781 glippsnept tehpeppqet
//
LOCUS       XP_061015194             797 aa            linear   MAM 02-DEC-2023
DEFINITION  melanoma inhibitory activity protein 2 isoform X9 [Dama dama].
ACCESSION   XP_061015194
VERSION     XP_061015194.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159211.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..797
                     /product="melanoma inhibitory activity protein 2 isoform
                     X9"
                     /calculated_mol_wt=90813
     Region          <133..437
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..797
                     /gene="MIA2"
                     /coded_by="XM_061159211.1:109..2502"
                     /db_xref="GeneID:133068135"
ORIGIN      
        1 melkdleeea vaalpedmrq snlygfpwel vicativgff avllflwrsf rsvrsrlyvg
       61 rekklavels tlieekckll ekfsivqkey eglesslkda nfekesteaq slefvegsqi
      121 seafceklng fkseledeil ilekelkeek skhskqdelm sdiskriqsl edeskslksq
      181 vaeakttfki fqmneerlki aikdalsens qlqesqkqll qeaeelreqv nelnkqkitf
      241 edykvhveqv lcdkenqiks lterlrkmkd wtavlgedit dddnlewemk sdsendayld
      301 nqpkgalkkl ihaaklrasl ktlegernqi ytqlsevdkt keeltecikn lqteqaslqs
      361 entqfesetq klqqklkvmt elyqenemil hrkltmeeny rlekeeklsk adekinhaae
      421 eletyrkrak dleeelerti hsyqgqiish ekkahdnwla artaernlnd lrkenahnrq
      481 kltetefkie llekdpyald vpntafgreh spygpsplgr pspemrafls pptllegplr
      541 lspllpgggg rgsrgpgnpl dhpitnerge snsdrltdph rassdtgsls ppweqdrrmm
      601 ippsgqpypd pvlpqrqdrf ysnsgrlsgp aelrsfnmps ldktdgpvss emessrnesk
      661 ddlgnlnvpd sslpieseat gpgfvppprp pvrvplfpmd trgpfirrgp pfpppppgsm
      721 ygaprdyfpp rdfpgppppp famrnvyppr gfphyllpra gffpppphpe srseipsgli
      781 ppsneptteh peppqet
//
LOCUS       XP_061015195             789 aa            linear   MAM 02-DEC-2023
DEFINITION  melanoma inhibitory activity protein 2 isoform X10 [Dama dama].
ACCESSION   XP_061015195
VERSION     XP_061015195.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159212.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..789
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..789
                     /product="melanoma inhibitory activity protein 2 isoform
                     X10"
                     /calculated_mol_wt=89826
     Region          <50..486
                     /region_name="Mplasa_alph_rch"
                     /note="helix-rich Mycoplasma protein; TIGR04523"
                     /db_xref="CDD:275316"
     CDS             1..789
                     /gene="MIA2"
                     /coded_by="XM_061159212.1:17..2386"
                     /db_xref="GeneID:133068135"
ORIGIN      
        1 mavaalpedm rqsnlygfpw elvicativg ffavllflwr sfrsvrsrly vgrekklave
       61 lstlieekck llekfsivqk eyeglesslk danfekeste aqslefvegs qiseafcekl
      121 ngfkselede ililekelke ekskhskqde lmsdiskriq sledeskslk sqvaeakttf
      181 kifqmneerl kiaikdalse nsqlqesqkq llqeaeelre qvnelnkqki tfedykvhve
      241 qvlcdkenqi kslterlrkm kdwtavlged itdddnlewe mksdsenday ldnqpkgalk
      301 klihaaklra slktlegern qiytqlsevd ktkeelteci knlqteqasl qsentqfese
      361 tqklqqklkv mtelyqenem ilhrkltmee nyrlekeekl skadekinha aeeletyrkr
      421 akdleeeler tihsyqgqii shekkahdnw laartaernl ndlrkenahn rqkltetefk
      481 iellekdpya ldvpntafgr ehspygpspl grpspemraf lspptllegp lrlspllpgg
      541 ggrgsrgpgn pldhpitner gesnsdrltd phrassdtgs lsppweqdrr mmippsgqpy
      601 pdpvlpqrqd rfysnsgrls gpaelrsfnm psldktdgpv ssemessrne skddlgnlnv
      661 pdsslpiese atgpgfvppp rppvrvplfp mdtrgpfirr gppfpppppg smygaprdyf
      721 pprdfpgppp ppfamrnvyp prgfphyllp ragffpppph pesrseipsg lippsneptt
      781 ehpeppqet
//
LOCUS       XP_061015196             780 aa            linear   MAM 02-DEC-2023
DEFINITION  melanoma inhibitory activity protein 2 isoform X11 [Dama dama].
ACCESSION   XP_061015196
VERSION     XP_061015196.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159213.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..780
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..780
                     /product="melanoma inhibitory activity protein 2 isoform
                     X11"
                     /calculated_mol_wt=88928
     Region          <116..420
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..780
                     /gene="MIA2"
                     /coded_by="XM_061159213.1:263..2605"
                     /db_xref="GeneID:133068135"
ORIGIN      
        1 mrqsnlygfp welvicativ gffavllflw rsfrsvrsrl yvgrekklav elstlieekc
       61 kllekfsivq keyeglessl kdanfekest eaqslefveg sqiseafcek lngfkseled
      121 eililekelk eekskhskqd elmsdiskri qsledesksl ksqvaeaktt fkifqmneer
      181 lkiaikdals ensqlqesqk qllqeaeelr eqvnelnkqk itfedykvhv eqvlcdkenq
      241 ikslterlrk mkdwtavlge ditdddnlew emksdsenda yldnqpkgal kklihaaklr
      301 aslktleger nqiytqlsev dktkeeltec iknlqteqas lqsentqfes etqklqqklk
      361 vmtelyqene milhrkltme enyrlekeek lskadekinh aaeeletyrk rakdleeele
      421 rtihsyqgqi ishekkahdn wlaartaern lndlrkenah nrqkltetef kiellekdpy
      481 aldvpntafg rehspygpsp lgrpspemra flspptlleg plrlspllpg gggrgsrgpg
      541 npldhpitne rgesnsdrlt dphrassdtg slsppweqdr rmmippsgqp ypdpvlpqrq
      601 drfysnsgrl sgpaelrsfn mpsldktdgp vssemessrn eskddlgnln vpdsslpies
      661 eatgpgfvpp prppvrvplf pmdtrgpfir rgppfppppp gsmygaprdy fpprdfpgpp
      721 pppfamrnvy pprgfphyll pragffpppp hpesrseips glippsnept tehpeppqet
//
LOCUS       XP_061015197             780 aa            linear   MAM 02-DEC-2023
DEFINITION  melanoma inhibitory activity protein 2 isoform X11 [Dama dama].
ACCESSION   XP_061015197
VERSION     XP_061015197.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159214.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..780
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..780
                     /product="melanoma inhibitory activity protein 2 isoform
                     X11"
                     /calculated_mol_wt=88928
     Region          <116..420
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..780
                     /gene="MIA2"
                     /coded_by="XM_061159214.1:93..2435"
                     /db_xref="GeneID:133068135"
ORIGIN      
        1 mrqsnlygfp welvicativ gffavllflw rsfrsvrsrl yvgrekklav elstlieekc
       61 kllekfsivq keyeglessl kdanfekest eaqslefveg sqiseafcek lngfkseled
      121 eililekelk eekskhskqd elmsdiskri qsledesksl ksqvaeaktt fkifqmneer
      181 lkiaikdals ensqlqesqk qllqeaeelr eqvnelnkqk itfedykvhv eqvlcdkenq
      241 ikslterlrk mkdwtavlge ditdddnlew emksdsenda yldnqpkgal kklihaaklr
      301 aslktleger nqiytqlsev dktkeeltec iknlqteqas lqsentqfes etqklqqklk
      361 vmtelyqene milhrkltme enyrlekeek lskadekinh aaeeletyrk rakdleeele
      421 rtihsyqgqi ishekkahdn wlaartaern lndlrkenah nrqkltetef kiellekdpy
      481 aldvpntafg rehspygpsp lgrpspemra flspptlleg plrlspllpg gggrgsrgpg
      541 npldhpitne rgesnsdrlt dphrassdtg slsppweqdr rmmippsgqp ypdpvlpqrq
      601 drfysnsgrl sgpaelrsfn mpsldktdgp vssemessrn eskddlgnln vpdsslpies
      661 eatgpgfvpp prppvrvplf pmdtrgpfir rgppfppppp gsmygaprdy fpprdfpgpp
      721 pppfamrnvy pprgfphyll pragffpppp hpesrseips glippsnept tehpeppqet
//
LOCUS       XP_061015198             556 aa            linear   MAM 02-DEC-2023
DEFINITION  F-box only protein 33 [Dama dama].
ACCESSION   XP_061015198
VERSION     XP_061015198.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159215.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..556
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..556
                     /product="F-box only protein 33"
                     /calculated_mol_wt=62570
     Region          68..115
                     /region_name="F-box_FBXO33"
                     /note="F-box domain found in F-box only protein 33
                     (FBXO33) and similar proteins; cd22104"
                     /db_xref="CDD:438876"
     Site            order(71,75,78..79,82..83,87,89..90,94..96,98)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438876"
     Region          <266..526
                     /region_name="FBXL3_LRR-like"
                     /note="Leucine-rich repeat domain of FBXL3 and related
                     proteins; cl45928"
                     /db_xref="CDD:480268"
     CDS             1..556
                     /gene="FBXO33"
                     /coded_by="XM_061159215.1:211..1881"
                     /db_xref="GeneID:133068136"
ORIGIN      
        1 mllflsvpqp rppgartrag aarvarwrrl rlqqlrrlrg llrglrgrpg igsrrrgrma
       61 lcgqaagaas lpselivhif sflsasdrlr asascshwre clfypalwpq lriclrvspa
      121 eqprleflmr kcgwfvrelr vefaaenyls ggggpgdggs adagtggeev ealqlstrwl
      181 evlrtylelv lcvlvsirnn rnlqkfslfg disvlqqqgs lsntylskvd pdgkkikqiq
      241 qlfeeilsns rqlkwlscgf mleivtptsl sslsnsiant mehlslldnn isgnstlita
      301 aelerfvnlr slaldfcdft aemarvltdn nhvplqrlsl lvhnvsvmhk sldnmpndeh
      361 wkalsrksts lrvyimafdi ksedmlkilk psiplerihf dsyitcvsga ivdlisrqyd
      421 kflthfilmn dvidtsgfpd lsdnrnedpl vllawrctkl sllaihgytv wahnliaiar
      481 lrgsdlkvle vteesidfdq geladqdvdp vhnlieqvsl glgqpwhavm dieslsvfte
      541 pnrhfyremq sfsedi
//
LOCUS       XP_061015199             571 aa            linear   MAM 02-DEC-2023
DEFINITION  kelch-like protein 28 [Dama dama].
ACCESSION   XP_061015199
VERSION     XP_061015199.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159216.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..571
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..571
                     /product="kelch-like protein 28"
                     /calculated_mol_wt=64100
     Region          35..553
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          321..372
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          376..419
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          423..465
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          469..513
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          516..559
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..571
                     /gene="KLHL28"
                     /coded_by="XM_061159216.1:117..1832"
                     /db_xref="GeneID:133068140"
ORIGIN      
        1 mdhtsptyml anlthlhseq llqglnllrq hhelcdiilr vgdvkihahk vvlasispyf
       61 kamftgnlse kensevefqc idetalqaiv eyaytgtvfi sqdtvesllp aanllqiklv
      121 lkeccafles qldpgncigi srfaetygch dlylaatkyi cqnfeavcqt eeffelthad
      181 ldeivsndcl nvateetvfy aleswikydv qerqkylaql lnsvrlplls vkfltrlyea
      241 nhlirddrtc khllnealky hfmpehrlsh qtvlmtrprc apkvlcavgg ksglfaclds
      301 vemyfpqnds wiglaplnip ryefgicvld qkvyviggie tnvrpgitir khensvecwn
      361 pdtntwtsle rmnesrstlg vvvlagelya lggydgqsyl qsvekyipkv rkwqpvapmt
      421 ttrscfaaav ldgmiyaigg ygpahmnsve rydpskdswe mvasmadkri hfgvgvmlgf
      481 ifvvgghngv shlssieryd phqnqwtvcr pmkeprtgvg aavvdnylyv vgghsgssyl
      541 ntvqkydpis dtwldsagmi ycrcnfglta l
//
LOCUS       XP_061015201             571 aa            linear   MAM 02-DEC-2023
DEFINITION  kelch-like protein 28 [Dama dama].
ACCESSION   XP_061015201
VERSION     XP_061015201.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159218.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..571
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..571
                     /product="kelch-like protein 28"
                     /calculated_mol_wt=64100
     Region          35..553
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          321..372
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          376..419
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          423..465
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          469..513
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          516..559
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..571
                     /gene="KLHL28"
                     /coded_by="XM_061159218.1:174..1889"
                     /db_xref="GeneID:133068140"
ORIGIN      
        1 mdhtsptyml anlthlhseq llqglnllrq hhelcdiilr vgdvkihahk vvlasispyf
       61 kamftgnlse kensevefqc idetalqaiv eyaytgtvfi sqdtvesllp aanllqiklv
      121 lkeccafles qldpgncigi srfaetygch dlylaatkyi cqnfeavcqt eeffelthad
      181 ldeivsndcl nvateetvfy aleswikydv qerqkylaql lnsvrlplls vkfltrlyea
      241 nhlirddrtc khllnealky hfmpehrlsh qtvlmtrprc apkvlcavgg ksglfaclds
      301 vemyfpqnds wiglaplnip ryefgicvld qkvyviggie tnvrpgitir khensvecwn
      361 pdtntwtsle rmnesrstlg vvvlagelya lggydgqsyl qsvekyipkv rkwqpvapmt
      421 ttrscfaaav ldgmiyaigg ygpahmnsve rydpskdswe mvasmadkri hfgvgvmlgf
      481 ifvvgghngv shlssieryd phqnqwtvcr pmkeprtgvg aavvdnylyv vgghsgssyl
      541 ntvqkydpis dtwldsagmi ycrcnfglta l
//
LOCUS       XP_061015202            1817 aa            linear   MAM 02-DEC-2023
DEFINITION  TOG array regulator of axonemal microtubules protein 1 isoform X1
            [Dama dama].
ACCESSION   XP_061015202
VERSION     XP_061015202.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159219.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1817
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1817
                     /product="TOG array regulator of axonemal microtubules
                     protein 1 isoform X1"
                     /calculated_mol_wt=199543
     Region          396..420
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            order(412..413,416,419..420,453..454,457,460..461,464,
                     488..489,492,497,528..529,532,535..536,566..567,570)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          432..464
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          507..536
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     CDS             1..1817
                     /gene="TOGARAM1"
                     /coded_by="XM_061159219.1:211..5664"
                     /db_xref="GeneID:133068141"
ORIGIN      
        1 maaapsallp lpplpsfcay rlqsrsrpsa petddsrggg amrgeknycc rgaagdhgsc
       61 pptpsplast llmpaeaiss swsgpgggls ggdeeetrll qqlrtapdps eafqalqaal
      121 prrggrlgfp rrkeamyral grvlveggsd ekrlclqfls dvlrgqgelg qleeafslal
      181 lpqlvvslre enpalrkdal qilhiclkrs sgqvlrtliq qglestdarl rastallfpi
      241 lltpedllld ldlteviisl arklggqeie eesetafsal qqigerlgqe rfqsyisrlp
      301 salrrhynrr lesqfgsqvp yyleletsgf pedplpcavs lsnsnlkfgi ipqelhsrll
      361 dqedyknrtq aveelkqvig rfnpsstshp slvsfislly nllddsnfkv vhgtlqvlhl
      421 lvirlgeqvq qflgpviaas vkvladnklv ikqeymkifl klmkevgpqq vlclllehlk
      481 hkhsrvreev vnicicsllt ypsedfdlsk lsfdlapalv dskrrvrqaa leafavlass
      541 mgsgktstlf kavdtvelqd ngdgvmnavq arlarktlpk lteqgfveya vlmpssaqgr
      601 sshlahgada dwllagnrtq sahchcgdha rdsmqmygpy sptvctrrvl sagkgknklp
      661 weneqpgvtg enqtssskdi eqftaydfip spklkpsqgm pvnddlcfsr krvsrslfqn
      721 srefnpdslp mcaagtsgth qtnlsgkcgq lgfsqicgkt gsvdsdlqyl gttnshqdkv
      781 caslcfsskt qqtfggqter sssysgpnss sgavllpsyp lssprtspkh tsltvspkks
      841 qdnsinfsss wplksfegls kpspqkklvs qkssdptgen sqekpqvqlt palvrspssr
      901 rglngtkpvp piprgisllp dkadlstvgp kkkepddiwk sekdnltvdl selnirdkdl
      961 dqeemqsslr slrnsaakkr aklsgstsdl espdsamkld ltvdspsrss spnissyses
     1021 gvysqeslts slsttpqgkr imsdifptfg skpcptrlss aknknsqtae qspstgttts
     1081 svsiighrmn ygfgcgdfee drshdispsa lkiqnkeqpr hkhtkastgs ssnfhqissf
     1141 dftstntlse dsvvvvgkgv fgnpipapat csqsvitsve ngvpfsvknt eppsgiygra
     1201 vqqsipsyvd senekdikvs iskstydkmr qkrkeekelf dikdsekkeq spwermkhtg
     1261 nekmasqnea spgsipqyke rmpsvthspe imdsselrpf skpevaltea lrlladedwe
     1321 kkieglnfir claafhseil ntklhetnfa vvqevknlrs gvsraavvcl sdlfthlkks
     1381 mdqeldntvk vllqksgesn tfiredvdka lramitnvtp aravvsling gqshlhiavr
     1441 rcaaqhlsdv vefmeperal sgtkdmadri lpaaakfaqd sspetryygr kmlflmmchp
     1501 nfdkmlekyv pskdlpyike svkslrqkgl geipldtpsa kgrrshtgsv gntrsssisr
     1561 dafnsterev teireitrks iprnslesae yikvitglln akdfrdring ikqllsdten
     1621 nqelvvgniv kifdafksrl hdsnskvnlv aletmhkmip llrdnlspii nmlipaivdn
     1681 nlnsknpgiy aaatnvvqal sqhvdnylll qpfctkaqfl ngkakqdmte kladivmely
     1741 qrkphateqk vlvvlwhllg nmtnsgslpg aggnirtata klskalftqm gqnllnqaas
     1801 qpshikksle elldmti
//
LOCUS       XP_061015203            1767 aa            linear   MAM 02-DEC-2023
DEFINITION  TOG array regulator of axonemal microtubules protein 1 isoform X2
            [Dama dama].
ACCESSION   XP_061015203
VERSION     XP_061015203.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159220.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1767
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1767
                     /product="TOG array regulator of axonemal microtubules
                     protein 1 isoform X2"
                     /calculated_mol_wt=193962
     Region          396..420
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            order(412..413,416,419..420,453..454,457,460..461,464,
                     488..489,492,497,528..529,532,535..536,566..567,570)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          432..464
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          507..536
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          <931..1201
                     /region_name="PTZ00108"
                     /note="DNA topoisomerase 2-like protein; Provisional"
                     /db_xref="CDD:240271"
     CDS             1..1767
                     /gene="TOGARAM1"
                     /coded_by="XM_061159220.1:211..5514"
                     /db_xref="GeneID:133068141"
ORIGIN      
        1 maaapsallp lpplpsfcay rlqsrsrpsa petddsrggg amrgeknycc rgaagdhgsc
       61 pptpsplast llmpaeaiss swsgpgggls ggdeeetrll qqlrtapdps eafqalqaal
      121 prrggrlgfp rrkeamyral grvlveggsd ekrlclqfls dvlrgqgelg qleeafslal
      181 lpqlvvslre enpalrkdal qilhiclkrs sgqvlrtliq qglestdarl rastallfpi
      241 lltpedllld ldlteviisl arklggqeie eesetafsal qqigerlgqe rfqsyisrlp
      301 salrrhynrr lesqfgsqvp yyleletsgf pedplpcavs lsnsnlkfgi ipqelhsrll
      361 dqedyknrtq aveelkqvig rfnpsstshp slvsfislly nllddsnfkv vhgtlqvlhl
      421 lvirlgeqvq qflgpviaas vkvladnklv ikqeymkifl klmkevgpqq vlclllehlk
      481 hkhsrvreev vnicicsllt ypsedfdlsk lsfdlapalv dskrrvrqaa leafavlass
      541 mgsgktstlf kavdtvelqd ngdgvmnavq arlarktlpk lteqgfveya vlmpssaqgr
      601 sshlahgada dwllagnrtq sahchcgdha rdsmqmygpy sptvctrrvl sagkgknklp
      661 weneqpgvtg enqtssskdi eqftaydfip spklkpsqgm pvnddlcfsr krvsrslfqn
      721 srefnpdslp mcaagtsgth qtnlsgkcgq lgfsqicgkt gsvdsdlqyl gttnshqdkv
      781 caslcfsskt qqtfggqter sssysgpnss sgavllpsyp lssprtspkh tsltvspkks
      841 qdnsinfsss wplksfegls kpspqkklvs qkssdptgen sqekpqvqlt palvrspssr
      901 rglngtkpvp piprgisllp dkadlstvgp kkkepddiwk sekdnltvdl selnirdkdl
      961 dqeemqsslr slrnsaakkr aklsgstsdl espdsamkld ltvdspsrss spnissyses
     1021 gvysqeslts slsttpqgkr imsdifptfg skpcptrlss aknknsqtae qspstastgs
     1081 ssnfhqissf dftstntlse dsvvvvgkgv fgnpipapat csqsvitsve ngvpfsvknt
     1141 eppsgiygra vqqsipsyvd senekdikvs iskstydkmr qkrkeekelf dikdsekkeq
     1201 spwermkhtg nekmasqnea spgsipqyke rmpsvthspe imdsselrpf skpevaltea
     1261 lrlladedwe kkieglnfir claafhseil ntklhetnfa vvqevknlrs gvsraavvcl
     1321 sdlfthlkks mdqeldntvk vllqksgesn tfiredvdka lramitnvtp aravvsling
     1381 gqshlhiavr rcaaqhlsdv vefmeperal sgtkdmadri lpaaakfaqd sspetryygr
     1441 kmlflmmchp nfdkmlekyv pskdlpyike svkslrqkgl geipldtpsa kgrrshtgsv
     1501 gntrsssisr dafnsterev teireitrks iprnslesae yikvitglln akdfrdring
     1561 ikqllsdten nqelvvgniv kifdafksrl hdsnskvnlv aletmhkmip llrdnlspii
     1621 nmlipaivdn nlnsknpgiy aaatnvvqal sqhvdnylll qpfctkaqfl ngkakqdmte
     1681 kladivmely qrkphateqk vlvvlwhllg nmtnsgslpg aggnirtata klskalftqm
     1741 gqnllnqaas qpshikksle elldmti
//
LOCUS       XP_061015204             667 aa            linear   MAM 02-DEC-2023
DEFINITION  pre-mRNA-processing factor 39 isoform X1 [Dama dama].
ACCESSION   XP_061015204
VERSION     XP_061015204.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159221.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..667
                     /product="pre-mRNA-processing factor 39 isoform X1"
                     /calculated_mol_wt=77981
     Region          52..>453
                     /region_name="RNA14"
                     /note="Pre-mRNA 3'-end processing (cleavage and
                     polyadenylation) factor [RNA processing and modification];
                     COG5107"
                     /db_xref="CDD:227438"
     Region          <416..>533
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          453..481
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(454,457..458,461..462,464,488,491..492,498..499,
                     501..502,526,529..530,533..534,539)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          486..520
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          525..555
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..667
                     /gene="PRPF39"
                     /coded_by="XM_061159221.1:189..2192"
                     /db_xref="GeneID:133068142"
ORIGIN      
        1 mqnshmeeyr npsngsigss seavveqpad fsteimnvte meqspdgsps vntateenei
       61 astvdlpvte teanfppeye kfwktvesnp qdftgwvyll qyveqenhlm aarkafdkff
      121 ihypycygyw kkyadlekrh dnikqsdevy rrglqaipls vdlwihyinf lketldpgdp
      181 etnstvrgtf ehavlaagtd frsdrlwemy inweneqgnl revtaiydri lgiptqlysh
      241 hfqrfkdhvq nnlprdlltg eqfiqlrrel asvnghsgdd gppgddlpsg ieditdpakl
      301 iteienmrhr iieihqemfn ynehevskrw tfeegikrpy fhvkplekaq lknwkeylef
      361 eiengtherv vvlfercvis calyeefwik yakymenhsi egvrhvfsra ctihlpkkpm
      421 vhmlwaafee qqgninearn ilrtfeecvl glamvrlrrv slerrhgnme eaerllqeai
      481 knaksnness fyaiklarhl fkiqknlpks rkvlleaier dkentklyln llemeysgdl
      541 kqneenilnc fdkaihgslp ikmritfsqr kvefledfgs dvnkllnayd ehqtllkeqd
      601 slkrkaengs eepeekkaht edttssstqm idgdlqanqa aynysawyqy nyqnpwnygq
      661 yyppppt
//
LOCUS       XP_061015205             548 aa            linear   MAM 02-DEC-2023
DEFINITION  pre-mRNA-processing factor 39 isoform X2 [Dama dama].
ACCESSION   XP_061015205
VERSION     XP_061015205.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159222.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..548
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..548
                     /product="pre-mRNA-processing factor 39 isoform X2"
                     /calculated_mol_wt=64179
     Region          40..>334
                     /region_name="RNA14"
                     /note="Pre-mRNA 3'-end processing (cleavage and
                     polyadenylation) factor [RNA processing and modification];
                     COG5107"
                     /db_xref="CDD:227438"
     Region          <297..>414
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          334..362
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(335,338..339,342..343,345,369,372..373,379..380,
                     382..383,407,410..411,414..415,421)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          367..401
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          406..436
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..548
                     /gene="PRPF39"
                     /coded_by="XM_061159222.1:380..2026"
                     /db_xref="GeneID:133068142"
ORIGIN      
        1 mqgllrfedq dsargdqnia mfyptstqmv yrrglqaipl svdlwihyin flketldpgd
       61 petnstvrgt fehavlaagt dfrsdrlwem yinweneqgn lrevtaiydr ilgiptqlys
      121 hhfqrfkdhv qnnlprdllt geqfiqlrre lasvnghsgd dgppgddlps gieditdpak
      181 liteienmrh riieihqemf nynehevskr wtfeegikrp yfhvkpleka qlknwkeyle
      241 feiengther vvvlfercvi scalyeefwi kyakymenhs iegvrhvfsr actihlpkkp
      301 mvhmlwaafe eqqgninear nilrtfeecv lglamvrlrr vslerrhgnm eeaerllqea
      361 iknaksnnes sfyaiklarh lfkiqknlpk srkvlleaie rdkentklyl nllemeysgd
      421 lkqneeniln cfdkaihgsl pikmritfsq rkvefledfg sdvnkllnay dehqtllkeq
      481 dslkrkaeng seepeekkah tedttssstq midgdlqanq aaynysawyq ynyqnpwnyg
      541 qyyppppt
//
LOCUS       XP_061015206             548 aa            linear   MAM 02-DEC-2023
DEFINITION  pre-mRNA-processing factor 39 isoform X2 [Dama dama].
ACCESSION   XP_061015206
VERSION     XP_061015206.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159223.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..548
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..548
                     /product="pre-mRNA-processing factor 39 isoform X2"
                     /calculated_mol_wt=64179
     Region          40..>334
                     /region_name="RNA14"
                     /note="Pre-mRNA 3'-end processing (cleavage and
                     polyadenylation) factor [RNA processing and modification];
                     COG5107"
                     /db_xref="CDD:227438"
     Region          <297..>414
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          334..362
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(335,338..339,342..343,345,369,372..373,379..380,
                     382..383,407,410..411,414..415,421)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          367..401
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          406..436
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..548
                     /gene="PRPF39"
                     /coded_by="XM_061159223.1:277..1923"
                     /db_xref="GeneID:133068142"
ORIGIN      
        1 mqgllrfedq dsargdqnia mfyptstqmv yrrglqaipl svdlwihyin flketldpgd
       61 petnstvrgt fehavlaagt dfrsdrlwem yinweneqgn lrevtaiydr ilgiptqlys
      121 hhfqrfkdhv qnnlprdllt geqfiqlrre lasvnghsgd dgppgddlps gieditdpak
      181 liteienmrh riieihqemf nynehevskr wtfeegikrp yfhvkpleka qlknwkeyle
      241 feiengther vvvlfercvi scalyeefwi kyakymenhs iegvrhvfsr actihlpkkp
      301 mvhmlwaafe eqqgninear nilrtfeecv lglamvrlrr vslerrhgnm eeaerllqea
      361 iknaksnnes sfyaiklarh lfkiqknlpk srkvlleaie rdkentklyl nllemeysgd
      421 lkqneeniln cfdkaihgsl pikmritfsq rkvefledfg sdvnkllnay dehqtllkeq
      481 dslkrkaeng seepeekkah tedttssstq midgdlqanq aaynysawyq ynyqnpwnyg
      541 qyyppppt
//
LOCUS       XP_061015207             548 aa            linear   MAM 02-DEC-2023
DEFINITION  pre-mRNA-processing factor 39 isoform X2 [Dama dama].
ACCESSION   XP_061015207
VERSION     XP_061015207.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159224.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..548
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..548
                     /product="pre-mRNA-processing factor 39 isoform X2"
                     /calculated_mol_wt=64179
     Region          40..>334
                     /region_name="RNA14"
                     /note="Pre-mRNA 3'-end processing (cleavage and
                     polyadenylation) factor [RNA processing and modification];
                     COG5107"
                     /db_xref="CDD:227438"
     Region          <297..>414
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          334..362
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(335,338..339,342..343,345,369,372..373,379..380,
                     382..383,407,410..411,414..415,421)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          367..401
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          406..436
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..548
                     /gene="PRPF39"
                     /coded_by="XM_061159224.1:485..2131"
                     /db_xref="GeneID:133068142"
ORIGIN      
        1 mqgllrfedq dsargdqnia mfyptstqmv yrrglqaipl svdlwihyin flketldpgd
       61 petnstvrgt fehavlaagt dfrsdrlwem yinweneqgn lrevtaiydr ilgiptqlys
      121 hhfqrfkdhv qnnlprdllt geqfiqlrre lasvnghsgd dgppgddlps gieditdpak
      181 liteienmrh riieihqemf nynehevskr wtfeegikrp yfhvkpleka qlknwkeyle
      241 feiengther vvvlfercvi scalyeefwi kyakymenhs iegvrhvfsr actihlpkkp
      301 mvhmlwaafe eqqgninear nilrtfeecv lglamvrlrr vslerrhgnm eeaerllqea
      361 iknaksnnes sfyaiklarh lfkiqknlpk srkvlleaie rdkentklyl nllemeysgd
      421 lkqneeniln cfdkaihgsl pikmritfsq rkvefledfg sdvnkllnay dehqtllkeq
      481 dslkrkaeng seepeekkah tedttssstq midgdlqanq aaynysawyq ynyqnpwnyg
      541 qyyppppt
//
LOCUS       XP_061015208             548 aa            linear   MAM 02-DEC-2023
DEFINITION  pre-mRNA-processing factor 39 isoform X2 [Dama dama].
ACCESSION   XP_061015208
VERSION     XP_061015208.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159225.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..548
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..548
                     /product="pre-mRNA-processing factor 39 isoform X2"
                     /calculated_mol_wt=64179
     Region          40..>334
                     /region_name="RNA14"
                     /note="Pre-mRNA 3'-end processing (cleavage and
                     polyadenylation) factor [RNA processing and modification];
                     COG5107"
                     /db_xref="CDD:227438"
     Region          <297..>414
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          334..362
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(335,338..339,342..343,345,369,372..373,379..380,
                     382..383,407,410..411,414..415,421)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          367..401
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          406..436
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..548
                     /gene="PRPF39"
                     /coded_by="XM_061159225.1:205..1851"
                     /db_xref="GeneID:133068142"
ORIGIN      
        1 mqgllrfedq dsargdqnia mfyptstqmv yrrglqaipl svdlwihyin flketldpgd
       61 petnstvrgt fehavlaagt dfrsdrlwem yinweneqgn lrevtaiydr ilgiptqlys
      121 hhfqrfkdhv qnnlprdllt geqfiqlrre lasvnghsgd dgppgddlps gieditdpak
      181 liteienmrh riieihqemf nynehevskr wtfeegikrp yfhvkpleka qlknwkeyle
      241 feiengther vvvlfercvi scalyeefwi kyakymenhs iegvrhvfsr actihlpkkp
      301 mvhmlwaafe eqqgninear nilrtfeecv lglamvrlrr vslerrhgnm eeaerllqea
      361 iknaksnnes sfyaiklarh lfkiqknlpk srkvlleaie rdkentklyl nllemeysgd
      421 lkqneeniln cfdkaihgsl pikmritfsq rkvefledfg sdvnkllnay dehqtllkeq
      481 dslkrkaeng seepeekkah tedttssstq midgdlqanq aaynysawyq ynyqnpwnyg
      541 qyyppppt
//
LOCUS       XP_061015209             224 aa            linear   MAM 02-DEC-2023
DEFINITION  peptidyl-prolyl cis-trans isomerase FKBP3 [Dama dama].
ACCESSION   XP_061015209
VERSION     XP_061015209.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159226.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..224
                     /product="peptidyl-prolyl cis-trans isomerase FKBP3"
                     /calculated_mol_wt=25060
     Region          7..73
                     /region_name="BTHB_FKBP25"
                     /note="basic tilted helix bundle (BTHB) domain found in 25
                     kDa FK506-binding protein (FKBP25) and similar proteins;
                     cd21063"
                     /db_xref="CDD:439139"
     Region          124..221
                     /region_name="FKBP_C"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
                     pfam00254"
                     /db_xref="CDD:459735"
     CDS             1..224
                     /gene="FKBP3"
                     /coded_by="XM_061159226.1:47..721"
                     /db_xref="GeneID:133068143"
ORIGIN      
        1 maaavpqraw tveqlrseql pkkdiikflq dhgsdsflae hkllgniknv aktankdhlv
       61 taynhlfesk rfkgtesisk vseqvknvkl nedkpketks eetldegppk ytksvlkkgd
      121 ktnfpkkgdv vhcwytgtlq dgtvfdtniq tsskkkknak plsfkvgigk virgwdeall
      181 tmskgekarl eiepewaygk kgqpdakipp naklifevel vdid
//
LOCUS       XP_061015210            2047 aa            linear   MAM 02-DEC-2023
DEFINITION  Fanconi anemia group M protein isoform X1 [Dama dama].
ACCESSION   XP_061015210
VERSION     XP_061015210.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159227.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2047
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2047
                     /product="Fanconi anemia group M protein isoform X1"
                     /calculated_mol_wt=230954
     Region          98..>608
                     /region_name="MPH1"
                     /note="ERCC4-related helicase [Replication, recombination
                     and repair]; COG1111"
                     /db_xref="CDD:440728"
     Region          681..796
                     /region_name="FANCM-MHF_bd"
                     /note="FANCM to MHF binding domain; pfam16783"
                     /db_xref="CDD:465270"
     Region          <1326..1549
                     /region_name="PTZ00108"
                     /note="DNA topoisomerase 2-like protein; Provisional"
                     /db_xref="CDD:240271"
     Region          1815..1953
                     /region_name="XPF_nuclease_FANCM"
                     /note="XPF-like nuclease domain of Fanconi anemia group M
                     protein (FANCM); cd20077"
                     /db_xref="CDD:410853"
     Site            order(1851,1861)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:410853"
     Site            order(1878,1881..1882,1885,1911,1913,1916..1917,
                     1919..1921,1923..1925,1927,1930..1931,1937,1940..1941,
                     1944..1945,1948)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:410853"
     CDS             1..2047
                     /gene="FANCM"
                     /coded_by="XM_061159227.1:123..6266"
                     /db_xref="GeneID:133068145"
ORIGIN      
        1 msgrqktlfq twgskvsrst gapscnsgte rpqstgisra rfpavaeaak aaevesesdd
       61 dvllvavyea erqlslengg fctsagalwi yptncpvrdy qlhisrtalf cntlvclptg
      121 lgktfiaavv mynfyrwfps gkvvfmaptk plvtqqieac yrvmgipqsh maemtgstqa
      181 ftrkeiwgsk rvlfltpqvm vndlsrgacp aaeikclvid eahkalgnya ycqvvrelvk
      241 ytnhfrilal satpgsdika vqqvitnlli gqvelrseds pdilpysher rveklvvplg
      301 eelaaiqkay iqileafass liqrnvlmrk dipnltkyqi ilardqfrkn pspnivgmqq
      361 giiegefaic islyhgyell qqmgmrslyf flcgimdgtk gmtraknels rnedfmklyd
      421 hlesmfahtr ststngvsvi qkggkdkkfc yshpklkkle evvvehfksw narktsdkkc
      481 detrvmifss frdsvqeiae mllphqpiir vmtfvghasg ksmkgftqke qlevvkqfrs
      541 ggyntlvstc vgeegldige vdliicfdaq kspirliqrm grtgrkrqgr ivvilaegre
      601 ertynqsqcn krsiykaisg nrqvlhfyqg sprmvpdgvn pqlhkmfith gvyepekpsr
      661 nlqrkssifs yrkgikqsns kndwflseee fklwnrryrl rdtdeiqeir lpqvqflslh
      721 neenrlteep ttgirqlsls ewrlwqdhpl ptyqvdhsdr cqlfinimqm iegmrheege
      781 csyeleiksy lqmedissas gtprneynpl asgtftsnkk ssfakninqg tsvsrtesde
      841 ecaeifkqip iksteipsfk kksseilkkd qlkkenkdvv vepldtdgss taehilqvdl
      901 qngkrasdtg evtatcavne nggnpscgll tdcqftnkst ssftgsffds gynsfsdeks
      961 lssslflsfe deldiaktgd qffnchsltk evlanverfl shsppplsgl sdleyeiskg
     1021 salensvflp yseclqndks tnlmsysavn sqqnlelnsl kfithpsett clhgttndni
     1081 sdepnfcdsd kvhknskneh lvssnqiqin igpskdfaee knhdvdnsdf pilhtaqdes
     1141 lllfedvnme fndvspppln skceslcmsd rtavsemapv sqffisdell lendsepqdq
     1201 ivcdtnmswk sheglrgihe eklnndennf dcskdlfsvt fdlgfcstgs edevvdhasv
     1261 tnnkilddlp grhldikqin gtncvshqav msranvdnst svttthpsse nkpspafscf
     1321 sknatkskef mspsysqfsl pvgekvmstp lsessilnsf sktriemakk sgsnigkvdl
     1381 hsfketlnst fgdsglsiek ckskkqinlh qschstedeq lssresedde ifrrkskktk
     1441 gnvlespenq knsevdsplq vvkkrrvppn rldlsssdes dnfhkrdpls edfkdhkrna
     1501 krsikvrkkq nhlklvarkf ldeeaelsqe daecvssden deseneqdss lldflndetq
     1561 lsqaindsem ravymksvrs plmsnrykmv hkkhnninif sqipeqdety ledsfcvdee
     1621 escksqssee vcvdfnlite dcytneskky ktrravklkq mkmrqncars knklsriill
     1681 ddsseeehdv kdkqefrpvv npstvpsgss phsrdhsnpv gnqllnqrqq tppnlkvpis
     1741 dvsdftpqnh tdmesasslf tpvsaqkdgg kfpvqskgat aledsgtsap ccsnsrphla
     1801 dthaslrlpq eghrtcilvd sreivsgsev vsslraihgl qvevcplngc dyivsnrmvv
     1861 errsqsemln sinknklinq iqylqsmfer icvivekdre ktgdtsrmfr rtksydsllt
     1921 tligagiril fsscqeetad llkelslveq rknvgihvpt vansnkcetl qfylsipnis
     1981 yitalnmchq fssvkkmtns tpqeismyaq vthqkaeeiy ryihyifdmq mlptdlnqvl
     2041 iqswlsr
//
LOCUS       XP_061015211            1848 aa            linear   MAM 02-DEC-2023
DEFINITION  Fanconi anemia group M protein isoform X2 [Dama dama].
ACCESSION   XP_061015211
VERSION     XP_061015211.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159228.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1848
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1848
                     /product="Fanconi anemia group M protein isoform X2"
                     /calculated_mol_wt=209067
     Region          3..>409
                     /region_name="MPH1"
                     /note="ERCC4-related helicase [Replication, recombination
                     and repair]; COG1111"
                     /db_xref="CDD:440728"
     Region          482..597
                     /region_name="FANCM-MHF_bd"
                     /note="FANCM to MHF binding domain; pfam16783"
                     /db_xref="CDD:465270"
     Region          1616..1754
                     /region_name="XPF_nuclease_FANCM"
                     /note="XPF-like nuclease domain of Fanconi anemia group M
                     protein (FANCM); cd20077"
                     /db_xref="CDD:410853"
     Site            order(1652,1662)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:410853"
     Site            order(1679,1682..1683,1686,1712,1714,1717..1718,
                     1720..1722,1724..1726,1728,1731..1732,1738,1741..1742,
                     1745..1746,1749)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:410853"
     CDS             1..1848
                     /gene="FANCM"
                     /coded_by="XM_061159228.1:204..5750"
                     /db_xref="GeneID:133068145"
ORIGIN      
        1 mvndlsrgac paaeikclvi deahkalgny aycqvvrelv kytnhfrila lsatpgsdik
       61 avqqvitnll igqvelrsed spdilpyshe rrveklvvpl geelaaiqka yiqileafas
      121 sliqrnvlmr kdipnltkyq iilardqfrk npspnivgmq qgiiegefai cislyhgyel
      181 lqqmgmrsly fflcgimdgt kgmtraknel srnedfmkly dhlesmfaht rststngvsv
      241 iqkggkdkkf cyshpklkkl eevvvehfks wnarktsdkk cdetrvmifs sfrdsvqeia
      301 emllphqpii rvmtfvghas gksmkgftqk eqlevvkqfr sggyntlvst cvgeegldig
      361 evdliicfda qkspirliqr mgrtgrkrqg rivvilaegr eertynqsqc nkrsiykais
      421 gnrqvlhfyq gsprmvpdgv npqlhkmfit hgvyepekps rnlqrkssif syrkgikqsn
      481 skndwflsee efklwnrryr lrdtdeiqei rlpqvqflsl hneenrltee pttgirqlsl
      541 sewrlwqdhp lptyqvdhsd rcqlfinimq miegmrheeg ecsyeleiks ylqmedissa
      601 sgtprneynp lasgtftsnk kssfakninq gtsvsrtesd eecaeifkqi piksteipsf
      661 kkksseilkk dqlkkenkdv vvepldtdgs staehilqvd lqngkrasdt gevtatcavn
      721 enggnpscgl ltdcqftnks tssftgsffd sgynsfsdek slssslflsf edeldiaktg
      781 dqffnchslt kevlanverf lshsppplsg lsdleyeisk gsalensvfl pyseclqndk
      841 stnlmsysav nsqqnlelns lkfithpset tclhgttndn isdepnfcds dkvhknskne
      901 hlvssnqiqi nigpskdfae eknhdvdnsd fpilhtaqde slllfedvnm efndvspppl
      961 nskceslcms drtavsemap vsqffisdel llendsepqd qivcdtnmsw ksheglrgih
     1021 eeklnndenn fdcskdlfsv tfdlgfcstg sedevvdhas vtnnkilddl pgrhldikqi
     1081 ngtncvshqa vmsranvdns tsvttthpss enkpspafsc fsknatkske fmspsysqfs
     1141 lpvgekvmst plsessilns fsktriemak ksgsnigkvd lhsfketlns tfgdsglsie
     1201 kckskkqinl hqschstede qlssresedd eifrrkskkt kgnvlespen qknsevdspl
     1261 qvvkkrrvpp nrldlsssde sdnfhkrdpl sedfkdhkrn akrsikvrkk qnhlklvark
     1321 fldeeaelsq edaecvssde ndeseneqds slldflndet qlsqaindse mravymksvr
     1381 splmsnrykm vhkkhnnini fsqipeqdet yledsfcvde eescksqsse evcvdfnlit
     1441 edcytneskk yktrravklk qmkmrqncar sknklsriil lddsseeehd vkdkqefrpv
     1501 vnpstvpsgs sphsrdhsnp vgnqllnqrq qtppnlkvpi sdvsdftpqn htdmesassl
     1561 ftpvsaqkdg gkfpvqskga taledsgtsa pccsnsrphl adthaslrlp qeghrtcilv
     1621 dsreivsgse vvsslraihg lqvevcplng cdyivsnrmv verrsqseml nsinknklin
     1681 qiqylqsmfe ricvivekdr ektgdtsrmf rrtksydsll ttligagiri lfsscqeeta
     1741 dllkelslve qrknvgihvp tvansnkcet lqfylsipni syitalnmch qfssvkkmtn
     1801 stpqeismya qvthqkaeei yryihyifdm qmlptdlnqv liqswlsr
//
LOCUS       XP_061015212            1646 aa            linear   MAM 02-DEC-2023
DEFINITION  Fanconi anemia group M protein isoform X3 [Dama dama].
ACCESSION   XP_061015212
VERSION     XP_061015212.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159229.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1646
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1646
                     /product="Fanconi anemia group M protein isoform X3"
                     /calculated_mol_wt=186412
     Region          45..194
                     /region_name="SF2_C_FANCM_Hef"
                     /note="C-terminal helicase domain of Fanconi anemia group
                     M family helicases; cd18801"
                     /db_xref="CDD:350188"
     Site            order(181,184)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350188"
     Region          280..395
                     /region_name="FANCM-MHF_bd"
                     /note="FANCM to MHF binding domain; pfam16783"
                     /db_xref="CDD:465270"
     Region          1414..1552
                     /region_name="XPF_nuclease_FANCM"
                     /note="XPF-like nuclease domain of Fanconi anemia group M
                     protein (FANCM); cd20077"
                     /db_xref="CDD:410853"
     Site            order(1450,1460)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:410853"
     Site            order(1477,1480..1481,1484,1510,1512,1515..1516,
                     1518..1520,1522..1524,1526,1529..1530,1536,1539..1540,
                     1543..1544,1547)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:410853"
     CDS             1..1646
                     /gene="FANCM"
                     /coded_by="XM_061159229.1:138..5078"
                     /db_xref="GeneID:133068145"
ORIGIN      
        1 mtraknelsr nedfmklydh lesmfahtrs tstngvsviq kggkdkkfcy shpklkklee
       61 vvvehfkswn arktsdkkcd etrvmifssf rdsvqeiaem llphqpiirv mtfvghasgk
      121 smkgftqkeq levvkqfrsg gyntlvstcv geegldigev dliicfdaqk spirliqrmg
      181 rtgrkrqgri vvilaegree rtynqsqcnk rsiykaisgn rqvlhfyqgs prmvpdgvnp
      241 qlhkmfithg vyepekpsrn lqrkssifsy rkgikqsnsk ndwflseeef klwnrryrlr
      301 dtdeiqeirl pqvqflslhn eenrlteept tgirqlslse wrlwqdhplp tyqvdhsdrc
      361 qlfinimqmi egmrheegec syeleiksyl qmedissasg tprneynpla sgtftsnkks
      421 sfakninqgt svsrtesdee caeifkqipi ksteipsfkk ksseilkkdq lkkenkdvvv
      481 epldtdgsst aehilqvdlq ngkrasdtge vtatcavnen ggnpscgllt dcqftnksts
      541 sftgsffdsg ynsfsdeksl ssslflsfed eldiaktgdq ffnchsltke vlanverfls
      601 hsppplsgls dleyeiskgs alensvflpy seclqndkst nlmsysavns qqnlelnslk
      661 fithpsettc lhgttndnis depnfcdsdk vhknsknehl vssnqiqini gpskdfaeek
      721 nhdvdnsdfp ilhtaqdesl llfedvnmef ndvsppplns kceslcmsdr tavsemapvs
      781 qffisdelll endsepqdqi vcdtnmswks heglrgihee klnndennfd cskdlfsvtf
      841 dlgfcstgse devvdhasvt nnkilddlpg rhldikqing tncvshqavm sranvdnsts
      901 vttthpssen kpspafscfs knatkskefm spsysqfslp vgekvmstpl sessilnsfs
      961 ktriemakks gsnigkvdlh sfketlnstf gdsglsiekc kskkqinlhq schstedeql
     1021 ssreseddei frrkskktkg nvlespenqk nsevdsplqv vkkrrvppnr ldlsssdesd
     1081 nfhkrdplse dfkdhkrnak rsikvrkkqn hlklvarkfl deeaelsqed aecvssdend
     1141 eseneqdssl ldflndetql sqaindsemr avymksvrsp lmsnrykmvh kkhnninifs
     1201 qipeqdetyl edsfcvdeee scksqsseev cvdfnlited cytneskkyk trravklkqm
     1261 kmrqncarsk nklsriilld dsseeehdvk dkqefrpvvn pstvpsgssp hsrdhsnpvg
     1321 nqllnqrqqt ppnlkvpisd vsdftpqnht dmesasslft pvsaqkdggk fpvqskgata
     1381 ledsgtsapc csnsrphlad thaslrlpqe ghrtcilvds reivsgsevv sslraihglq
     1441 vevcplngcd yivsnrmvve rrsqsemlns inknklinqi qylqsmferi cvivekdrek
     1501 tgdtsrmfrr tksydslltt ligagirilf sscqeetadl lkelslveqr knvgihvptv
     1561 ansnkcetlq fylsipnisy italnmchqf ssvkkmtnst pqeismyaqv thqkaeeiyr
     1621 yihyifdmqm lptdlnqvli qswlsr
//
LOCUS       XP_061015213            1433 aa            linear   MAM 02-DEC-2023
DEFINITION  Fanconi anemia group M protein isoform X4 [Dama dama].
ACCESSION   XP_061015213
VERSION     XP_061015213.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159230.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1433
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1433
                     /product="Fanconi anemia group M protein isoform X4"
                     /calculated_mol_wt=160828
     Region          98..>608
                     /region_name="MPH1"
                     /note="ERCC4-related helicase [Replication, recombination
                     and repair]; COG1111"
                     /db_xref="CDD:440728"
     Region          681..796
                     /region_name="FANCM-MHF_bd"
                     /note="FANCM to MHF binding domain; pfam16783"
                     /db_xref="CDD:465270"
     CDS             1..1433
                     /gene="FANCM"
                     /coded_by="XM_061159230.1:126..4427"
                     /db_xref="GeneID:133068145"
ORIGIN      
        1 msgrqktlfq twgskvsrst gapscnsgte rpqstgisra rfpavaeaak aaevesesdd
       61 dvllvavyea erqlslengg fctsagalwi yptncpvrdy qlhisrtalf cntlvclptg
      121 lgktfiaavv mynfyrwfps gkvvfmaptk plvtqqieac yrvmgipqsh maemtgstqa
      181 ftrkeiwgsk rvlfltpqvm vndlsrgacp aaeikclvid eahkalgnya ycqvvrelvk
      241 ytnhfrilal satpgsdika vqqvitnlli gqvelrseds pdilpysher rveklvvplg
      301 eelaaiqkay iqileafass liqrnvlmrk dipnltkyqi ilardqfrkn pspnivgmqq
      361 giiegefaic islyhgyell qqmgmrslyf flcgimdgtk gmtraknels rnedfmklyd
      421 hlesmfahtr ststngvsvi qkggkdkkfc yshpklkkle evvvehfksw narktsdkkc
      481 detrvmifss frdsvqeiae mllphqpiir vmtfvghasg ksmkgftqke qlevvkqfrs
      541 ggyntlvstc vgeegldige vdliicfdaq kspirliqrm grtgrkrqgr ivvilaegre
      601 ertynqsqcn krsiykaisg nrqvlhfyqg sprmvpdgvn pqlhkmfith gvyepekpsr
      661 nlqrkssifs yrkgikqsns kndwflseee fklwnrryrl rdtdeiqeir lpqvqflslh
      721 neenrlteep ttgirqlsls ewrlwqdhpl ptyqvdhsdr cqlfinimqm iegmrheege
      781 csyeleiksy lqmedissas gtprneynpl asgtftsnkk ssfakninqg tsvsrtesde
      841 ecaeifkqip iksteipsfk kksseilkkd qlkkenkdvv vepldtdgss taehilqvdl
      901 qngkrasdtg evtatcavne nggnpscgll tdcqftnkst ssftgsffds gynsfsdeks
      961 lssslflsfe deldiaktgd qffnchsltk evlanverfl shsppplsgl sdleyeiskg
     1021 salensvflp yseclqndks tnlmsysavn sqqnlelnsl kfithpsett clhgttndni
     1081 sdepnfcdsd kvhknskneh lvssnqiqin igpskdfaee knhdvdnsdf pilhtaqdes
     1141 lllfedvnme fndvspppln skceslcmsd rtavsemapv sqffisdell lendsepqdq
     1201 ivcdtnmswk sheglrgihe eklnndennf dcskdlfsvt fdlgfcstgs edevvdhasv
     1261 tnnkilddlp grhldikqin gtncvshqav msranvdnst svttthpsse nkpspafscf
     1321 sknatkskef mspsysqfsl pvgekvmstp lsessilnsf sktriemakk sgsnigkvdl
     1381 hsfketlnst fgdsglsiek ckskkqinlh qschstegll plflpysiwl ppe
//
LOCUS       XP_061015216            1052 aa            linear   MAM 02-DEC-2023
DEFINITION  mis18-binding protein 1 [Dama dama].
ACCESSION   XP_061015216
VERSION     XP_061015216.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159233.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1052
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1052
                     /product="mis18-binding protein 1"
                     /calculated_mol_wt=119903
     Region          374..461
                     /region_name="SANTA"
                     /note="SANTA (SANT Associated); pfam09133"
                     /db_xref="CDD:462689"
     Region          800..845
                     /region_name="SANT"
                     /note="'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains.
                     Tandem copies of the domain bind telomeric DNA tandem
                     repeatsas part of the capping complex. Binding is sequence
                     dependent for repeats which contain the G/C rich motif
                     [C2-3 A (CA)1-6]. The domain is...; cd00167"
                     /db_xref="CDD:238096"
     Site            order(801,834..835,837..838,840..842,844..845)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238096"
     CDS             1..1052
                     /gene="MIS18BP1"
                     /coded_by="XM_061159233.1:525..3683"
                     /db_xref="GeneID:133068146"
ORIGIN      
        1 miatplkhpg mhlssdtssq rnmpmhaiff dsipsgtltp vkdlvkyqks alklnnhkks
       61 qfvemavfnn knvfqstmla eattsnssld isaikpnkde fknkasyesp gkifqrmkek
      121 vlrdkqeeas rnsfleptqn esftpngaee rilkhtylce ekennksfqp ensslrenst
      181 siqevpless nnifvpvkqk ikyqqekkvp lhnltyelpv lnqehknvaa anraltraql
      241 arqilhsken tvatnkskkd tfvledidst cekspnttve tlcgpdveng gqllvsddsk
      301 itaegtskqe ikegnektmh retdftgsmn dtckivlatp rfhitipqrs krnawnpsps
      361 tsqtitngvk vkvvqlqewm ikvinnntai cvegklidit niywhsnvii erikhnklrt
      421 lsgniyelkg midqismkea gypkylirkf mfgfpekwke yidnfleqlr acekekgkar
      481 qnqkaercvp diqksmknda rktkpdvlqr atttydldcd slertkeskv sidiltskeq
      541 fftdeerkym tvnqkkpcvl vtplkskkii ekkcmnynls sdtikavtef algkpqkesk
      601 tdsnettspv skptktlegt fecsvgrnse ntedcfehdf ltvndkikip spkkeqtvts
      661 dfkkntrlsk lkkienqvtv sfdkhqsspd lsneesekgk kfrrkteivk ktrainteki
      721 vvqqrkstrk tktipvmses eteesenefy mkqkkakcsa kenlqkpdvg nelpntekmg
      781 sgktnrysle clpgltqdee wnkkelqklh cavaslpkhk pgfwsdvata vgsrsadecq
      841 rkymedprgk rfqkhdtkkk panpkgqdgk iddadketmk itakvgtlkr kkqmrdfleq
      901 lpkddhddff satplqrqki llpsfqdsqe gddilpnmdr npttpssvif plaktpqchh
      961 vtpgmldsin rndcdkyvfr mqkthkskgg ttwgnikkkt fetdfstpps rrktpfnkel
     1021 aensgigklf tkamesldee endyyfsdsd sa
//
LOCUS       XP_061015217            1052 aa            linear   MAM 02-DEC-2023
DEFINITION  mis18-binding protein 1 [Dama dama].
ACCESSION   XP_061015217
VERSION     XP_061015217.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159234.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1052
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1052
                     /product="mis18-binding protein 1"
                     /calculated_mol_wt=119903
     Region          374..461
                     /region_name="SANTA"
                     /note="SANTA (SANT Associated); pfam09133"
                     /db_xref="CDD:462689"
     Region          800..845
                     /region_name="SANT"
                     /note="'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains.
                     Tandem copies of the domain bind telomeric DNA tandem
                     repeatsas part of the capping complex. Binding is sequence
                     dependent for repeats which contain the G/C rich motif
                     [C2-3 A (CA)1-6]. The domain is...; cd00167"
                     /db_xref="CDD:238096"
     Site            order(801,834..835,837..838,840..842,844..845)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238096"
     CDS             1..1052
                     /gene="MIS18BP1"
                     /coded_by="XM_061159234.1:383..3541"
                     /db_xref="GeneID:133068146"
ORIGIN      
        1 miatplkhpg mhlssdtssq rnmpmhaiff dsipsgtltp vkdlvkyqks alklnnhkks
       61 qfvemavfnn knvfqstmla eattsnssld isaikpnkde fknkasyesp gkifqrmkek
      121 vlrdkqeeas rnsfleptqn esftpngaee rilkhtylce ekennksfqp ensslrenst
      181 siqevpless nnifvpvkqk ikyqqekkvp lhnltyelpv lnqehknvaa anraltraql
      241 arqilhsken tvatnkskkd tfvledidst cekspnttve tlcgpdveng gqllvsddsk
      301 itaegtskqe ikegnektmh retdftgsmn dtckivlatp rfhitipqrs krnawnpsps
      361 tsqtitngvk vkvvqlqewm ikvinnntai cvegklidit niywhsnvii erikhnklrt
      421 lsgniyelkg midqismkea gypkylirkf mfgfpekwke yidnfleqlr acekekgkar
      481 qnqkaercvp diqksmknda rktkpdvlqr atttydldcd slertkeskv sidiltskeq
      541 fftdeerkym tvnqkkpcvl vtplkskkii ekkcmnynls sdtikavtef algkpqkesk
      601 tdsnettspv skptktlegt fecsvgrnse ntedcfehdf ltvndkikip spkkeqtvts
      661 dfkkntrlsk lkkienqvtv sfdkhqsspd lsneesekgk kfrrkteivk ktrainteki
      721 vvqqrkstrk tktipvmses eteesenefy mkqkkakcsa kenlqkpdvg nelpntekmg
      781 sgktnrysle clpgltqdee wnkkelqklh cavaslpkhk pgfwsdvata vgsrsadecq
      841 rkymedprgk rfqkhdtkkk panpkgqdgk iddadketmk itakvgtlkr kkqmrdfleq
      901 lpkddhddff satplqrqki llpsfqdsqe gddilpnmdr npttpssvif plaktpqchh
      961 vtpgmldsin rndcdkyvfr mqkthkskgg ttwgnikkkt fetdfstpps rrktpfnkel
     1021 aensgigklf tkamesldee endyyfsdsd sa
//
LOCUS       XP_061015218             707 aa            linear   MAM 02-DEC-2023
DEFINITION  protein-glutamine gamma-glutamyltransferase Z [Dama dama].
ACCESSION   XP_061015218
VERSION     XP_061015218.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159235.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..707
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..707
                     /product="protein-glutamine gamma-glutamyltransferase Z"
                     /calculated_mol_wt=79189
     Region          7..120
                     /region_name="Transglut_N"
                     /note="Transglutaminase family; pfam00868"
                     /db_xref="CDD:459971"
     Region          269..361
                     /region_name="TGc"
                     /note="Transglutaminase/protease-like homologues;
                     smart00460"
                     /db_xref="CDD:214673"
     Region          477..587
                     /region_name="Transglut_C"
                     /note="Transglutaminase family, C-terminal ig like domain;
                     pfam00927"
                     /db_xref="CDD:460002"
     Region          605..703
                     /region_name="Transglut_C"
                     /note="Transglutaminase family, C-terminal ig like domain;
                     pfam00927"
                     /db_xref="CDD:460002"
     CDS             1..707
                     /gene="TGM7"
                     /coded_by="XM_061159235.1:96..2219"
                     /db_xref="GeneID:133068147"
ORIGIN      
        1 maalelrsvd lqsaknnqeh htqemglqrl ivrrsqsfti qlhfnrpfhs kkdsitfvae
       61 tgpapkellg tratflltqa rqgngwsasd ftiqanslfv slftppsavi gpyslkmeis
      121 qdpshstthp lgtfillfnp wsaeddvylp setllqeyim mdygfvykgh erfitpwpwn
      181 ygqfeediid icfeilnksl yflknpskdy sqrndvvyic rvvsaminsn ddsgvlqgnw
      241 gedysrgvsp lawtgsvail rqwaarggqp vkygqcwvfa avmctvmrcl gvptrvvsnf
      301 rsahnsdanl tidtyydqha emlptqkrdk iwnfhvwnec wmirkdlppg yngwqvldpt
      361 pqqtssglfr cgpasvkair egevhlpydt pfvyaevnad evvwllkdgq aqeilahnts
      421 sigkeistkm vgsdqrqnit ssykypegsp eersvfmkas qkmlgvrrts spfldllgsg
      481 gavgqpaqlq lhltrkpewg qdlllrlhar rvadrahprg pihlvvgfca qtllhnggtr
      541 eplwrqkvhl tldfgediqw plalpynnyr nkltdeklir vsgiakveet gksmlvlkdi
      601 slepphisie vseraevgka lkvhvsltnt lsvalshctm vlegsgling qisndlgtlv
      661 aghtieiqvd lypikagprq lqvlvssnei keikgykdif vaaarap
//
LOCUS       XP_061015219             310 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C14orf28 homolog [Dama dama].
ACCESSION   XP_061015219
VERSION     XP_061015219.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159236.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..310
                     /product="uncharacterized protein C14orf28 homolog"
                     /calculated_mol_wt=36297
     CDS             1..310
                     /gene="C13H14orf28"
                     /coded_by="XM_061159236.1:336..1268"
                     /db_xref="GeneID:133068148"
ORIGIN      
        1 mktlfeeika siknnynqdr sfwrpvlpwg gvftikagrk avsctplyve irlkntctid
       61 gflmllyvil nenenfprel slhlgrefvd cflylmdtys fttvkllwiw dkmekqqyks
      121 evhkasliid lfgnehdnft knlenlmsti qesycsnwrc ptrvqedqqr tininppqei
      181 phgnlirlav delfcsriel ceehgcgglr efsqrvfchg appfvvlnmq hwksedlayv
      241 pyyldlsdhk yllegatlfn keehhysaaf qidghwmhyd glrnvnlill nkppefllls
      301 slvyiratek
//
LOCUS       XP_061015220             310 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C14orf28 homolog [Dama dama].
ACCESSION   XP_061015220
VERSION     XP_061015220.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159237.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..310
                     /product="uncharacterized protein C14orf28 homolog"
                     /calculated_mol_wt=36297
     CDS             1..310
                     /gene="C13H14orf28"
                     /coded_by="XM_061159237.1:300..1232"
                     /db_xref="GeneID:133068148"
ORIGIN      
        1 mktlfeeika siknnynqdr sfwrpvlpwg gvftikagrk avsctplyve irlkntctid
       61 gflmllyvil nenenfprel slhlgrefvd cflylmdtys fttvkllwiw dkmekqqyks
      121 evhkasliid lfgnehdnft knlenlmsti qesycsnwrc ptrvqedqqr tininppqei
      181 phgnlirlav delfcsriel ceehgcgglr efsqrvfchg appfvvlnmq hwksedlayv
      241 pyyldlsdhk yllegatlfn keehhysaaf qidghwmhyd glrnvnlill nkppefllls
      301 slvyiratek
//
LOCUS       XP_061015221            1965 aa            linear   MAM 02-DEC-2023
DEFINITION  TP53-binding protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061015221
VERSION     XP_061015221.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159238.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1965
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1965
                     /product="TP53-binding protein 1 isoform X1"
                     /calculated_mol_wt=212794
     Region          <234..448
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <413..679
                     /region_name="MSCRAMM_ClfB"
                     /note="MSCRAMM family adhesin clumping factor ClfB;
                     NF033845"
                     /db_xref="CDD:468203"
     Region          1478..1595
                     /region_name="53-BP1_Tudor"
                     /note="Tumour suppressor p53-binding protein-1 Tudor;
                     pfam09038"
                     /db_xref="CDD:430382"
     Site            order(1488,1495,1512,1514..1516)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:410454"
     Site            order(1488,1495,1512,1514,1516)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:410454"
     Region          1721..1832
                     /region_name="BRCT_p53bp1_rpt1"
                     /note="first (central) BRCT domain in p53-binding protein
                     1 (p53BP1) and similar proteins; cd17745"
                     /db_xref="CDD:349376"
     Site            order(1730..1731,1803..1807)
                     /site_type="other"
                     /note="gamma-H2A interaction site [polypeptide binding]"
                     /db_xref="CDD:349376"
     Site            order(1820,1822,1826,1829)
                     /site_type="other"
                     /note="p53 interaction site [polypeptide binding]"
                     /db_xref="CDD:349376"
     Region          1860..1963
                     /region_name="BRCT_3"
                     /note="BRCA1 C Terminus (BRCT) domain; pfam18428"
                     /db_xref="CDD:465764"
     CDS             1..1965
                     /gene="TP53BP1"
                     /coded_by="XM_061159238.1:119..6016"
                     /db_xref="GeneID:133068149"
ORIGIN      
        1 mpgeqmdptg sqldsdfsqq dtpcliieds qpesqvledd sgshfsvlar hlpnlqthke
       61 npvlnvesnt ehtaeeeqgd sksgfnehlk enkaadsmds shletrgsis qvieqlpqpn
      121 rkssvlgmsv esaspvseek eeeveekeke ekedipddtt hslsaedpas sqlgfgvlel
      181 sqsqdieeqt vpyeidrepl qsvttnsgyt rlsdvdania ikheeqsned ipmaeqpskd
      241 vpvveeqnsp parsedmpss pkvsaameak eqtsaqelpe ggmqvqkspe pevlstqedl
      301 fdqsnktvas dgcstplree ggcslaatpa ttlhllqlsg qrslvqesls tnssdlvaps
      361 pdafrstpfi vpsspteqeg rkdepmdmsv lseggesfqk klqgdepaem enppvppept
      421 ispqastpvs qstpvftpgs lpipsqpefs hdifipspsl eerssdekkg rdlhsssltv
      481 ecskasetep knstedlgls ltgdscklml stseysqspk ieslsshrid edgentqied
      541 tepmspvlns klvraendsi lidpaqegqv elkqnddkak gdntetrddi silsasckgr
      601 eepvaedvci dltcdsgsqa vpspatrsea lssvldqeea ieikehhpee gssgseveei
      661 petpcesqce epkeentesv tlhlsltetq sqglglrkev pkqecqeame veasvisids
      721 pqklpvleqe lehkdqeawe eatsedssvv ivdvkepspr vdvssepleg vekcsdsqsw
      781 eddapeiepc tenradiqee ksaeyegdqk svtaekepve adssqppltl vradgtpgpe
      841 qemqqtqpqe rtdstlreds kvakaehvds gveaqqleka saqasqsfce sssetpfhft
      901 lpkegdiipp ltgatpplig hlklepkrhs tpigisnype stittsdvms esmvetndpi
      961 pgnekgdsga apemgdqlcl rmklvspete aseeslqfsl ekpatgerkn gstavaeava
     1021 ssqktmsvfs cvceaqqede arsqnsssap irgnllhfpn tqddeekgkl egdqgtrqsq
     1081 qpvkpsspvr epaappsqqm gtqepsspqg eameidrpgg qegewsprqe kpskaliarp
     1141 sqnnvgiqti erslwvpetv saatqtvqnv ceqgtstvdq ssgrqdaaaq tekgsgerpa
     1201 gapgddtesl hsqgeeefdm pqpphghvlh rhmrtirevr tlvtrvitdv yyvdgtever
     1261 kvteeteepi vecqecetev spsqtggssg dlgdissfss kasslhrtss gtslsamhss
     1321 gssgrgagqp kgkasgtepa efalpssrgg pgklsprkgv sqtgtpvcee dgdaglgirq
     1381 agkapvtprg rgrrgrppsr ttgtretavp gplgiedisp smspddksft rimprapdss
     1441 rradtgagal rrsdspeipf qtaagpsdgl dasspgnsfv glrvvakwss ngyfysgkit
     1501 rdvgagkykl lfddgyecdv lgkdillcdp ipldtevtal sedeyfsagv vkghrkesge
     1561 lyysiekegq rkwykrmavi lsleqgnrlr eqyglgpyea vtpltkaadi sldnlvegkr
     1621 krrsninspa tpttssssst tptrkvpesp rattgvpsgk rklvtseeer spakrgrksa
     1681 tvkpgavgag efvspcesgd npgepsalee qrgplplnkt lflgyafllt mattsdklas
     1741 rsklpdgptg sseeeeefle ippfnkqyte cqlragagyi ledfneaqcn tayqclliad
     1801 qhcrtrkyfl clasgipcvs hvwvhdscha nqlqnyrnyl lpagysleeq rildwqpren
     1861 pfqdlkvllv sdqqqnflel wseilmtgga asvkqhhssa hnkdialgvf dvvvtdpscp
     1921 asvlkcaeal qlpvvsqewv iqclivgeri gfkqhpkykh dyvsh
//
LOCUS       XP_061015222            1960 aa            linear   MAM 02-DEC-2023
DEFINITION  TP53-binding protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061015222
VERSION     XP_061015222.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159239.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1960
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1960
                     /product="TP53-binding protein 1 isoform X2"
                     /calculated_mol_wt=212251
     Region          <229..443
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <408..674
                     /region_name="MSCRAMM_ClfB"
                     /note="MSCRAMM family adhesin clumping factor ClfB;
                     NF033845"
                     /db_xref="CDD:468203"
     Region          1473..1590
                     /region_name="53-BP1_Tudor"
                     /note="Tumour suppressor p53-binding protein-1 Tudor;
                     pfam09038"
                     /db_xref="CDD:430382"
     Site            order(1483,1490,1507,1509..1511)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:410454"
     Site            order(1483,1490,1507,1509,1511)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:410454"
     Region          1716..1827
                     /region_name="BRCT_p53bp1_rpt1"
                     /note="first (central) BRCT domain in p53-binding protein
                     1 (p53BP1) and similar proteins; cd17745"
                     /db_xref="CDD:349376"
     Site            order(1725..1726,1798..1802)
                     /site_type="other"
                     /note="gamma-H2A interaction site [polypeptide binding]"
                     /db_xref="CDD:349376"
     Site            order(1815,1817,1821,1824)
                     /site_type="other"
                     /note="p53 interaction site [polypeptide binding]"
                     /db_xref="CDD:349376"
     Region          1855..1958
                     /region_name="BRCT_3"
                     /note="BRCA1 C Terminus (BRCT) domain; pfam18428"
                     /db_xref="CDD:465764"
     CDS             1..1960
                     /gene="TP53BP1"
                     /coded_by="XM_061159239.1:146..6028"
                     /db_xref="GeneID:133068149"
ORIGIN      
        1 mdptgsqlds dfsqqdtpcl iiedsqpesq vleddsgshf svlarhlpnl qthkenpvln
       61 vesntehtae eeqgdsksgf nehlkenkaa dsmdsshlet rgsisqvieq lpqpnrkssv
      121 lgmsvesasp vseekeeeve ekekeekedi pddtthslsa edpassqlgf gvlelsqsqd
      181 ieeqtvpyei dreplqsvtt nsgytrlsdv daniaikhee qsnedipmae qpskdvpvve
      241 eqnspparse dmpsspkvsa ameakeqtsa qelpeggmqv qkspepevls tqedlfdqsn
      301 ktvasdgcst plreeggcsl aatpattlhl lqlsgqrslv qeslstnssd lvapspdafr
      361 stpfivpssp teqegrkdep mdmsvlsegg esfqkklqgd epaemenppv ppeptispqa
      421 stpvsqstpv ftpgslpips qpefshdifi pspsleerss dekkgrdlhs ssltvecska
      481 setepknste dlglsltgds cklmlstsey sqspkiesls shridedgen tqiedtepms
      541 pvlnsklvra endsilidpa qegqvelkqn ddkakgdnte trddisilsa sckgreepva
      601 edvcidltcd sgsqavpspa trsealssvl dqeeaieike hhpeegssgs eveeipetpc
      661 esqceepkee ntesvtlhls ltetqsqglg lrkevpkqec qeameveasv isidspqklp
      721 vleqelehkd qeaweeatse dssvvivdvk epsprvdvss eplegvekcs dsqsweddap
      781 eiepctenra diqeeksaey egdqksvtae kepveadssq ppltlvradg tpgpeqemqq
      841 tqpqertdst lredskvaka ehvdsgveaq qlekasaqas qsfcessset pfhftlpkeg
      901 diippltgat pplighlkle pkrhstpigi snypestitt sdvmsesmve tndpipgnek
      961 gdsgaapemg dqlclrmklv speteasees lqfslekpat gerkngstav aeavassqkt
     1021 msvfscvcea qqedearsqn sssapirgnl lhfpntqdde ekgklegdqg trqsqqpvkp
     1081 sspvrepaap psqqmgtqep sspqgeamei drpggqegew sprqekpska liarpsqnnv
     1141 giqtierslw vpetvsaatq tvqnvceqgt stvdqssgrq daaaqtekgs gerpagapgd
     1201 dteslhsqge eefdmpqpph ghvlhrhmrt irevrtlvtr vitdvyyvdg teverkvtee
     1261 teepivecqe cetevspsqt ggssgdlgdi ssfsskassl hrtssgtsls amhssgssgr
     1321 gagqpkgkas gtepaefalp ssrggpgkls prkgvsqtgt pvceedgdag lgirqagkap
     1381 vtprgrgrrg rppsrttgtr etavpgplgi edispsmspd dksftrimpr apdssrradt
     1441 gagalrrsds peipfqtaag psdgldassp gnsfvglrvv akwssngyfy sgkitrdvga
     1501 gkykllfddg yecdvlgkdi llcdpipldt evtalsedey fsagvvkghr kesgelyysi
     1561 ekegqrkwyk rmavilsleq gnrlreqygl gpyeavtplt kaadisldnl vegkrkrrsn
     1621 inspatptts ssssttptrk vpesprattg vpsgkrklvt seeerspakr grksatvkpg
     1681 avgagefvsp cesgdnpgep saleeqrgpl plnktlflgy aflltmatts dklasrsklp
     1741 dgptgsseee eefleippfn kqytecqlra gagyiledfn eaqcntayqc lliadqhcrt
     1801 rkyflclasg ipcvshvwvh dschanqlqn yrnyllpagy sleeqrildw qprenpfqdl
     1861 kvllvsdqqq nflelwseil mtggaasvkq hhssahnkdi algvfdvvvt dpscpasvlk
     1921 caealqlpvv sqewviqcli vgerigfkqh pkykhdyvsh
//
LOCUS       XP_061015223            1925 aa            linear   MAM 02-DEC-2023
DEFINITION  TP53-binding protein 1 isoform X3 [Dama dama].
ACCESSION   XP_061015223
VERSION     XP_061015223.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159240.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1925
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1925
                     /product="TP53-binding protein 1 isoform X3"
                     /calculated_mol_wt=208414
     Region          <234..448
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1438..1555
                     /region_name="53-BP1_Tudor"
                     /note="Tumour suppressor p53-binding protein-1 Tudor;
                     pfam09038"
                     /db_xref="CDD:430382"
     Site            order(1448,1455,1472,1474..1476)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:410454"
     Site            order(1448,1455,1472,1474,1476)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:410454"
     Region          1681..1792
                     /region_name="BRCT_p53bp1_rpt1"
                     /note="first (central) BRCT domain in p53-binding protein
                     1 (p53BP1) and similar proteins; cd17745"
                     /db_xref="CDD:349376"
     Site            order(1690..1691,1763..1767)
                     /site_type="other"
                     /note="gamma-H2A interaction site [polypeptide binding]"
                     /db_xref="CDD:349376"
     Site            order(1780,1782,1786,1789)
                     /site_type="other"
                     /note="p53 interaction site [polypeptide binding]"
                     /db_xref="CDD:349376"
     Region          1820..1923
                     /region_name="BRCT_3"
                     /note="BRCA1 C Terminus (BRCT) domain; pfam18428"
                     /db_xref="CDD:465764"
     CDS             1..1925
                     /gene="TP53BP1"
                     /coded_by="XM_061159240.1:119..5896"
                     /db_xref="GeneID:133068149"
ORIGIN      
        1 mpgeqmdptg sqldsdfsqq dtpcliieds qpesqvledd sgshfsvlar hlpnlqthke
       61 npvlnvesnt ehtaeeeqgd sksgfnehlk enkaadsmds shletrgsis qvieqlpqpn
      121 rkssvlgmsv esaspvseek eeeveekeke ekedipddtt hslsaedpas sqlgfgvlel
      181 sqsqdieeqt vpyeidrepl qsvttnsgyt rlsdvdania ikheeqsned ipmaeqpskd
      241 vpvveeqnsp parsedmpss pkvsaameak eqtsaqelpe ggmqvqkspe pevlstqedl
      301 fdqsnktvas dgcstplree ggcslaatpa ttlhllqlsg qrslvqesls tnssdlvaps
      361 pdafrstpfi vpsspteqeg rkdepmdmsv lseggesfqk klqgdepaem enppvppept
      421 ispqastpvs qstpvftpgs lpipsqpefs hdifipspsl eerssdekkg rdlhsssltv
      481 ecskasetep knstedlgls ltgdscklml stseysqspk ieslsshrid edgentqied
      541 tepmspvlns klvraendsi lidpaqegqv elkqnddkak gdntetrddi silsasckgr
      601 eepvaedvci dltcdsgsqa vpspatrsea lssvldqeea ieikehhpee gssgseveei
      661 petpcesqce epkeentesv tlhlsltetq sqglglrkev pkqecqeame veasvisids
      721 pqklpvleqe lehkdqeawe eatsedssvv ivdvkepspr vdvssepleg vekcsdsqsw
      781 eddapeiepc tenradiqee ksaeyegdqk svtaekepve adssqppltl vradgtpgpe
      841 qemqqtqpqe rtdstlreds kvakaehvds gveaqqleka saqasqsfce sssgisnype
      901 stittsdvms esmvetndpi pgnekgdsga apemgdqlcl rmklvspete aseeslqfsl
      961 ekpatgerkn gstavaeava ssqktmsvfs cvceaqqede arsqnsssap irgnllhfpn
     1021 tqddeekgkl egdqgtrqsq qpvkpsspvr epaappsqqm gtqepsspqg eameidrpgg
     1081 qegewsprqe kpskaliarp sqnnvgiqti erslwvpetv saatqtvqnv ceqgtstvdq
     1141 ssgrqdaaaq tekgsgerpa gapgddtesl hsqgeeefdm pqpphghvlh rhmrtirevr
     1201 tlvtrvitdv yyvdgtever kvteeteepi vecqecetev spsqtggssg dlgdissfss
     1261 kasslhrtss gtslsamhss gssgrgagqp kgkasgtepa efalpssrgg pgklsprkgv
     1321 sqtgtpvcee dgdaglgirq agkapvtprg rgrrgrppsr ttgtretavp gplgiedisp
     1381 smspddksft rimprapdss rradtgagal rrsdspeipf qtaagpsdgl dasspgnsfv
     1441 glrvvakwss ngyfysgkit rdvgagkykl lfddgyecdv lgkdillcdp ipldtevtal
     1501 sedeyfsagv vkghrkesge lyysiekegq rkwykrmavi lsleqgnrlr eqyglgpyea
     1561 vtpltkaadi sldnlvegkr krrsninspa tpttssssst tptrkvpesp rattgvpsgk
     1621 rklvtseeer spakrgrksa tvkpgavgag efvspcesgd npgepsalee qrgplplnkt
     1681 lflgyafllt mattsdklas rsklpdgptg sseeeeefle ippfnkqyte cqlragagyi
     1741 ledfneaqcn tayqclliad qhcrtrkyfl clasgipcvs hvwvhdscha nqlqnyrnyl
     1801 lpagysleeq rildwqpren pfqdlkvllv sdqqqnflel wseilmtgga asvkqhhssa
     1861 hnkdialgvf dvvvtdpscp asvlkcaeal qlpvvsqewv iqclivgeri gfkqhpkykh
     1921 dyvsh
//
LOCUS       XP_061015224            1915 aa            linear   MAM 02-DEC-2023
DEFINITION  TP53-binding protein 1 isoform X4 [Dama dama].
ACCESSION   XP_061015224
VERSION     XP_061015224.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159241.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1915
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1915
                     /product="TP53-binding protein 1 isoform X4"
                     /calculated_mol_wt=207682
     Region          <234..448
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <413..679
                     /region_name="MSCRAMM_ClfB"
                     /note="MSCRAMM family adhesin clumping factor ClfB;
                     NF033845"
                     /db_xref="CDD:468203"
     Region          1428..1545
                     /region_name="53-BP1_Tudor"
                     /note="Tumour suppressor p53-binding protein-1 Tudor;
                     pfam09038"
                     /db_xref="CDD:430382"
     Site            order(1438,1445,1462,1464..1466)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:410454"
     Site            order(1438,1445,1462,1464,1466)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:410454"
     Region          1671..1782
                     /region_name="BRCT_p53bp1_rpt1"
                     /note="first (central) BRCT domain in p53-binding protein
                     1 (p53BP1) and similar proteins; cd17745"
                     /db_xref="CDD:349376"
     Site            order(1680..1681,1753..1757)
                     /site_type="other"
                     /note="gamma-H2A interaction site [polypeptide binding]"
                     /db_xref="CDD:349376"
     Site            order(1770,1772,1776,1779)
                     /site_type="other"
                     /note="p53 interaction site [polypeptide binding]"
                     /db_xref="CDD:349376"
     Region          1810..1913
                     /region_name="BRCT_3"
                     /note="BRCA1 C Terminus (BRCT) domain; pfam18428"
                     /db_xref="CDD:465764"
     CDS             1..1915
                     /gene="TP53BP1"
                     /coded_by="XM_061159241.1:119..5866"
                     /db_xref="GeneID:133068149"
ORIGIN      
        1 mpgeqmdptg sqldsdfsqq dtpcliieds qpesqvledd sgshfsvlar hlpnlqthke
       61 npvlnvesnt ehtaeeeqgd sksgfnehlk enkaadsmds shletrgsis qvieqlpqpn
      121 rkssvlgmsv esaspvseek eeeveekeke ekedipddtt hslsaedpas sqlgfgvlel
      181 sqsqdieeqt vpyeidrepl qsvttnsgyt rlsdvdania ikheeqsned ipmaeqpskd
      241 vpvveeqnsp parsedmpss pkvsaameak eqtsaqelpe ggmqvqkspe pevlstqedl
      301 fdqsnktvas dgcstplree ggcslaatpa ttlhllqlsg qrslvqesls tnssdlvaps
      361 pdafrstpfi vpsspteqeg rkdepmdmsv lseggesfqk klqgdepaem enppvppept
      421 ispqastpvs qstpvftpgs lpipsqpefs hdifipspsl eerssdekkg rdlhsssltv
      481 ecskasetep knstedlgls ltgdscklml stseysqspk ieslsshrid edgentqied
      541 tepmspvlns klvraendsi lidpaqegqv elkqnddkak gdntetrddi silsasckgr
      601 eepvaedvci dltcdsgsqa vpspatrsea lssvldqeea ieikehhpee gssgseveei
      661 petpcesqce epkeentesv tlhlsltetq sqglglrkev pkqecqeame veasvisids
      721 pqklpvleqe lehkdqeawe eatsedssvv ivdvkepspr vdvssepleg vekcsdsqsw
      781 eddapeiepc tenradiqee ksaeyegdqk svtaekepve adssqppltl vradgtpgpe
      841 qemqqtqpqe rtdstlreds kvakaehvds gveaqqleka saqasqsfce sssetpfhft
      901 lpkegdiipp ltgatpplig hlklepkrhs tpigisnype stittsdvms esmvetndpi
      961 pgnekgdsga apemgdqlcl rmklvspete aseeslqfsl ekpatgerkn gstavaeava
     1021 ssqktmsvfs cvceaqqede arsqnsssap irgnllhfpn tqddeekgkl egdqgtrqsq
     1081 qpvkpsspvr epaappsqqm gtqepsspqg eameidrpgg qegewsprqe kpskaliarp
     1141 sqnnvgiqti erslwvpetv saatqtvqnv ceqgtstvdq ssgrqdaaaq tekgsgerpa
     1201 gapgddtesl hsqgeeefdm pqpphghvlh rhmrtirevr tlvtrvitdv yyvdgtever
     1261 kvteeteepi vecqecetev spsqtggssg dlgdissfss kasslhrtss gtslsamhss
     1321 gssgrgagqp kgkasgtepa efalpssrgg pgklretavp gplgiedisp smspddksft
     1381 rimprapdss rradtgagal rrsdspeipf qtaagpsdgl dasspgnsfv glrvvakwss
     1441 ngyfysgkit rdvgagkykl lfddgyecdv lgkdillcdp ipldtevtal sedeyfsagv
     1501 vkghrkesge lyysiekegq rkwykrmavi lsleqgnrlr eqyglgpyea vtpltkaadi
     1561 sldnlvegkr krrsninspa tpttssssst tptrkvpesp rattgvpsgk rklvtseeer
     1621 spakrgrksa tvkpgavgag efvspcesgd npgepsalee qrgplplnkt lflgyafllt
     1681 mattsdklas rsklpdgptg sseeeeefle ippfnkqyte cqlragagyi ledfneaqcn
     1741 tayqclliad qhcrtrkyfl clasgipcvs hvwvhdscha nqlqnyrnyl lpagysleeq
     1801 rildwqpren pfqdlkvllv sdqqqnflel wseilmtgga asvkqhhssa hnkdialgvf
     1861 dvvvtdpscp asvlkcaeal qlpvvsqewv iqclivgeri gfkqhpkykh dyvsh
//
LOCUS       XP_061015225            1890 aa            linear   MAM 02-DEC-2023
DEFINITION  TP53-binding protein 1 isoform X5 [Dama dama].
ACCESSION   XP_061015225
VERSION     XP_061015225.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159242.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1890
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1890
                     /product="TP53-binding protein 1 isoform X5"
                     /calculated_mol_wt=205026
     Region          <154..>635
                     /region_name="rad2"
                     /note="DNA excision repair protein (rad2); TIGR00600"
                     /db_xref="CDD:273166"
     Region          1403..1520
                     /region_name="53-BP1_Tudor"
                     /note="Tumour suppressor p53-binding protein-1 Tudor;
                     pfam09038"
                     /db_xref="CDD:430382"
     Site            order(1413,1420,1437,1439..1441)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:410454"
     Site            order(1413,1420,1437,1439,1441)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:410454"
     Region          1646..1757
                     /region_name="BRCT_p53bp1_rpt1"
                     /note="first (central) BRCT domain in p53-binding protein
                     1 (p53BP1) and similar proteins; cd17745"
                     /db_xref="CDD:349376"
     Site            order(1655..1656,1728..1732)
                     /site_type="other"
                     /note="gamma-H2A interaction site [polypeptide binding]"
                     /db_xref="CDD:349376"
     Site            order(1745,1747,1751,1754)
                     /site_type="other"
                     /note="p53 interaction site [polypeptide binding]"
                     /db_xref="CDD:349376"
     Region          1785..1888
                     /region_name="BRCT_3"
                     /note="BRCA1 C Terminus (BRCT) domain; pfam18428"
                     /db_xref="CDD:465764"
     CDS             1..1890
                     /gene="TP53BP1"
                     /coded_by="XM_061159242.1:119..5791"
                     /db_xref="GeneID:133068149"
ORIGIN      
        1 mpgeqmdptg sqldsdfsqq dtpcliieds qpesqvledd sgshfsvlar hlpnlqthke
       61 npvlnvesnt ehtaeeeqgd sksgfnehlk enkaadsmds shletrgsis qvieqlpqpn
      121 rkssvlgmsv esaspvseek eeeveekeke ekedipddtt hslsaedpas sqlgfgvlel
      181 sqsqdieeqt vpyeidrepl qsvttnsgyt rlsdvdania ikheeqsned ipmaeqpskd
      241 vpvveeqnsp parsedmpss pkvsaameak eqtsaqelpe ggmqvqkspe pevlstqedl
      301 fdqsnktdep mdmsvlsegg esfqkklqgd epaemenppv ppeptispqa stpvsqstpv
      361 ftpgslpips qpefshdifi pspsleerss dekkgrdlhs ssltvecska setepknste
      421 dlglsltgds cklmlstsey sqspkiesls shridedgen tqiedtepms pvlnsklvra
      481 endsilidpa qegqvelkqn ddkakgdnte trddisilsa sckgreepva edvcidltcd
      541 sgsqavpspa trsealssvl dqeeaieike hhpeegssgs eveeipetpc esqceepkee
      601 ntesvtlhls ltetqsqglg lrkevpkqec qeameveasv isidspqklp vleqelehkd
      661 qeaweeatse dssvvivdvk epsprvdvss eplegvekcs dsqsweddap eiepctenra
      721 diqeeksaey egdqksvtae kepveadssq ppltlvradg tpgpeqemqq tqpqertdst
      781 lredskvaka ehvdsgveaq qlekasaqas qsfcessset pfhftlpkeg diippltgat
      841 pplighlkle pkrhstpigi snypestitt sdvmsesmve tndpipgnek gdsgaapemg
      901 dqlclrmklv speteasees lqfslekpat gerkngstav aeavassqkt msvfscvcea
      961 qqedearsqn sssapirgnl lhfpntqdde ekgklegdqg trqsqqpvkp sspvrepaap
     1021 psqqmgtqep sspqgeamei drpggqegew sprqekpska liarpsqnnv giqtierslw
     1081 vpetvsaatq tvqnvceqgt stvdqssgrq daaaqtekgs gerpagapgd dteslhsqge
     1141 eefdmpqpph ghvlhrhmrt irevrtlvtr vitdvyyvdg teverkvtee teepivecqe
     1201 cetevspsqt ggssgdlgdi ssfsskassl hrtssgtsls amhssgssgr gagqpkgkas
     1261 gtepaefalp ssrggpgkls prkgvsqtgt pvceedgdag lgirqagkap vtprgrgrrg
     1321 rppsrttgtr etavpgplgi edispsmspd dksftrimpr apdssrradt gagalrrsds
     1381 peipfqtaag psdgldassp gnsfvglrvv akwssngyfy sgkitrdvga gkykllfddg
     1441 yecdvlgkdi llcdpipldt evtalsedey fsagvvkghr kesgelyysi ekegqrkwyk
     1501 rmavilsleq gnrlreqygl gpyeavtplt kaadisldnl vegkrkrrsn inspatptts
     1561 ssssttptrk vpesprattg vpsgkrklvt seeerspakr grksatvkpg avgagefvsp
     1621 cesgdnpgep saleeqrgpl plnktlflgy aflltmatts dklasrsklp dgptgsseee
     1681 eefleippfn kqytecqlra gagyiledfn eaqcntayqc lliadqhcrt rkyflclasg
     1741 ipcvshvwvh dschanqlqn yrnyllpagy sleeqrildw qprenpfqdl kvllvsdqqq
     1801 nflelwseil mtggaasvkq hhssahnkdi algvfdvvvt dpscpasvlk caealqlpvv
     1861 sqewviqcli vgerigfkqh pkykhdyvsh
//
LOCUS       XP_061015226            1017 aa            linear   MAM 02-DEC-2023
DEFINITION  TP53-binding protein 1 isoform X6 [Dama dama].
ACCESSION   XP_061015226
VERSION     XP_061015226.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159243.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1017
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1017
                     /product="TP53-binding protein 1 isoform X6"
                     /calculated_mol_wt=109740
     Region          530..647
                     /region_name="53-BP1_Tudor"
                     /note="Tumour suppressor p53-binding protein-1 Tudor;
                     pfam09038"
                     /db_xref="CDD:430382"
     Site            order(540,547,564,566..568)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:410454"
     Site            order(540,547,564,566,568)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:410454"
     Region          773..884
                     /region_name="BRCT_p53bp1_rpt1"
                     /note="first (central) BRCT domain in p53-binding protein
                     1 (p53BP1) and similar proteins; cd17745"
                     /db_xref="CDD:349376"
     Site            order(782..783,855..859)
                     /site_type="other"
                     /note="gamma-H2A interaction site [polypeptide binding]"
                     /db_xref="CDD:349376"
     Site            order(872,874,878,881)
                     /site_type="other"
                     /note="p53 interaction site [polypeptide binding]"
                     /db_xref="CDD:349376"
     Region          912..1015
                     /region_name="BRCT_3"
                     /note="BRCA1 C Terminus (BRCT) domain; pfam18428"
                     /db_xref="CDD:465764"
     CDS             1..1017
                     /gene="TP53BP1"
                     /coded_by="XM_061159243.1:592..3645"
                     /db_xref="GeneID:133068149"
ORIGIN      
        1 msesmvetnd pipgnekgds gaapemgdql clrmklvspe teaseeslqf slekpatger
       61 kngstavaea vassqktmsv fscvceaqqe dearsqnsss apirgnllhf pntqddeekg
      121 klegdqgtrq sqqpvkpssp vrepaappsq qmgtqepssp qgeameidrp ggqegewspr
      181 qekpskalia rpsqnnvgiq tierslwvpe tvsaatqtvq nvceqgtstv dqssgrqdaa
      241 aqtekgsger pagapgddte slhsqgeeef dmpqpphghv lhrhmrtire vrtlvtrvit
      301 dvyyvdgtev erkvteetee pivecqecet evspsqtggs sgdlgdissf sskasslhrt
      361 ssgtslsamh ssgssgrgag qpkgkasgte paefalpssr ggpgklsprk gvsqtgtpvc
      421 eedgdaglgi rqagkapvtp rgrgrrgrpp srttgtreta vpgplgiedi spsmspddks
      481 ftrimprapd ssrradtgag alrrsdspei pfqtaagpsd gldasspgns fvglrvvakw
      541 ssngyfysgk itrdvgagky kllfddgyec dvlgkdillc dpipldtevt alsedeyfsa
      601 gvvkghrkes gelyysieke gqrkwykrma vilsleqgnr lreqyglgpy eavtpltkaa
      661 disldnlveg krkrrsnins patpttssss sttptrkvpe sprattgvps gkrklvtsee
      721 erspakrgrk satvkpgavg agefvspces gdnpgepsal eeqrgplpln ktlflgyafl
      781 ltmattsdkl asrsklpdgp tgsseeeeef leippfnkqy tecqlragag yiledfneaq
      841 cntayqclli adqhcrtrky flclasgipc vshvwvhdsc hanqlqnyrn yllpagysle
      901 eqrildwqpr enpfqdlkvl lvsdqqqnfl elwseilmtg gaasvkqhhs sahnkdialg
      961 vfdvvvtdps cpasvlkcae alqlpvvsqe wviqclivge rigfkqhpky khdyvsh
//
LOCUS       XP_061015227             856 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger and SCAN domain-containing protein 29 isoform X1 [Dama
            dama].
ACCESSION   XP_061015227
VERSION     XP_061015227.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159244.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..856
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..856
                     /product="zinc finger and SCAN domain-containing protein
                     29 isoform X1"
                     /calculated_mol_wt=97270
     Region          13..123
                     /region_name="SCAN"
                     /note="leucine rich region; smart00431"
                     /db_xref="CDD:128708"
     Region          243..324
                     /region_name="Myb_DNA-bind_4"
                     /note="Myb/SANT-like DNA-binding domain; pfam13837"
                     /db_xref="CDD:463994"
     Region          406..487
                     /region_name="Myb_DNA-bind_4"
                     /note="Myb/SANT-like DNA-binding domain; pfam13837"
                     /db_xref="CDD:463994"
     Region          <674..834
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          678..698
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(683,685,687,689..690,693..694,697,711,713,717..718,
                     721..722,725,739,741,743,745..746,749..750,753)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          706..726
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(706,709,722,726)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          734..754
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          762..782
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          790..810
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          818..838
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..856
                     /gene="ZSCAN29"
                     /coded_by="XM_061159244.1:611..3181"
                     /db_xref="GeneID:133068151"
ORIGIN      
        1 makptlrgng snseafrqrf rkfhyqevag preafsqlwe lccrwlrpev rtkeqivell
       61 vleqfltvlp geiqnwvqkq cpesgeeavt lvedlerepg rpgrsvtvsv kgqevrlekm
      121 tplkssrell svrqesvepq prgvpkkera rspdlgpqeq mnpkeklrpf qrsgfpcsks
      181 smvskleqge pwipdlgske kelprgshie drrvpadllp srrersswad qdpwvledek
      241 vagvhwghee trtllailsq pefyealrnc hrnsqvygav aerlrefgfl rtleqcrtkf
      301 kglqknyrkv ksghppetcp ffeemealms aqvialpsng leeaashsgl ggsdaeteep
      361 epegwhhaeg daamaeesds davgqeatsq dpdssttpvl frspsgvhwg yeetktylai
      421 lsetqfyeal rnchrnsqly gavaerlwey gflrtpeqcr tkfkslqtsy rkvkngqape
      481 tcpffeemda lvnarvaapp segqekeial cpvqetseae aekqaeqave aieddsedde
      541 edpeippeal trapvlfqsp sgfeagfene dnlkrdisee vqlhktllar serriprhln
      601 qrkgnesecr pgrqwedtpg eskgkpafpe rslgqvpshq rsylgersyk ylrygksfap
      661 yshpmhqlah qvenpykcad cgksfsrsar lirhrrihtg ekpyqcldcg ksfrdssnfi
      721 thrrihtgek pykcgecgkr fnqsssliih qrthtgekpy qceecgksfn nsshfsahrr
      781 ihtgerphvc pdcgksfsks sdlrahhrth tgekpygcqd cgkcfskssa lnkhreihtr
      841 ekllsqpapk saledl
//
LOCUS       XP_061015229             856 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger and SCAN domain-containing protein 29 isoform X1 [Dama
            dama].
ACCESSION   XP_061015229
VERSION     XP_061015229.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159246.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..856
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..856
                     /product="zinc finger and SCAN domain-containing protein
                     29 isoform X1"
                     /calculated_mol_wt=97270
     Region          13..123
                     /region_name="SCAN"
                     /note="leucine rich region; smart00431"
                     /db_xref="CDD:128708"
     Region          243..324
                     /region_name="Myb_DNA-bind_4"
                     /note="Myb/SANT-like DNA-binding domain; pfam13837"
                     /db_xref="CDD:463994"
     Region          406..487
                     /region_name="Myb_DNA-bind_4"
                     /note="Myb/SANT-like DNA-binding domain; pfam13837"
                     /db_xref="CDD:463994"
     Region          <674..834
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          678..698
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(683,685,687,689..690,693..694,697,711,713,717..718,
                     721..722,725,739,741,743,745..746,749..750,753)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          706..726
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(706,709,722,726)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          734..754
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          762..782
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          790..810
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          818..838
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..856
                     /gene="ZSCAN29"
                     /coded_by="XM_061159246.1:573..3143"
                     /db_xref="GeneID:133068151"
ORIGIN      
        1 makptlrgng snseafrqrf rkfhyqevag preafsqlwe lccrwlrpev rtkeqivell
       61 vleqfltvlp geiqnwvqkq cpesgeeavt lvedlerepg rpgrsvtvsv kgqevrlekm
      121 tplkssrell svrqesvepq prgvpkkera rspdlgpqeq mnpkeklrpf qrsgfpcsks
      181 smvskleqge pwipdlgske kelprgshie drrvpadllp srrersswad qdpwvledek
      241 vagvhwghee trtllailsq pefyealrnc hrnsqvygav aerlrefgfl rtleqcrtkf
      301 kglqknyrkv ksghppetcp ffeemealms aqvialpsng leeaashsgl ggsdaeteep
      361 epegwhhaeg daamaeesds davgqeatsq dpdssttpvl frspsgvhwg yeetktylai
      421 lsetqfyeal rnchrnsqly gavaerlwey gflrtpeqcr tkfkslqtsy rkvkngqape
      481 tcpffeemda lvnarvaapp segqekeial cpvqetseae aekqaeqave aieddsedde
      541 edpeippeal trapvlfqsp sgfeagfene dnlkrdisee vqlhktllar serriprhln
      601 qrkgnesecr pgrqwedtpg eskgkpafpe rslgqvpshq rsylgersyk ylrygksfap
      661 yshpmhqlah qvenpykcad cgksfsrsar lirhrrihtg ekpyqcldcg ksfrdssnfi
      721 thrrihtgek pykcgecgkr fnqsssliih qrthtgekpy qceecgksfn nsshfsahrr
      781 ihtgerphvc pdcgksfsks sdlrahhrth tgekpygcqd cgkcfskssa lnkhreihtr
      841 ekllsqpapk saledl
//
LOCUS       XP_061015230             856 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger and SCAN domain-containing protein 29 isoform X1 [Dama
            dama].
ACCESSION   XP_061015230
VERSION     XP_061015230.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159247.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..856
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..856
                     /product="zinc finger and SCAN domain-containing protein
                     29 isoform X1"
                     /calculated_mol_wt=97270
     Region          13..123
                     /region_name="SCAN"
                     /note="leucine rich region; smart00431"
                     /db_xref="CDD:128708"
     Region          243..324
                     /region_name="Myb_DNA-bind_4"
                     /note="Myb/SANT-like DNA-binding domain; pfam13837"
                     /db_xref="CDD:463994"
     Region          406..487
                     /region_name="Myb_DNA-bind_4"
                     /note="Myb/SANT-like DNA-binding domain; pfam13837"
                     /db_xref="CDD:463994"
     Region          <674..834
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          678..698
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(683,685,687,689..690,693..694,697,711,713,717..718,
                     721..722,725,739,741,743,745..746,749..750,753)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          706..726
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(706,709,722,726)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          734..754
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          762..782
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          790..810
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          818..838
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..856
                     /gene="ZSCAN29"
                     /coded_by="XM_061159247.1:261..2831"
                     /db_xref="GeneID:133068151"
ORIGIN      
        1 makptlrgng snseafrqrf rkfhyqevag preafsqlwe lccrwlrpev rtkeqivell
       61 vleqfltvlp geiqnwvqkq cpesgeeavt lvedlerepg rpgrsvtvsv kgqevrlekm
      121 tplkssrell svrqesvepq prgvpkkera rspdlgpqeq mnpkeklrpf qrsgfpcsks
      181 smvskleqge pwipdlgske kelprgshie drrvpadllp srrersswad qdpwvledek
      241 vagvhwghee trtllailsq pefyealrnc hrnsqvygav aerlrefgfl rtleqcrtkf
      301 kglqknyrkv ksghppetcp ffeemealms aqvialpsng leeaashsgl ggsdaeteep
      361 epegwhhaeg daamaeesds davgqeatsq dpdssttpvl frspsgvhwg yeetktylai
      421 lsetqfyeal rnchrnsqly gavaerlwey gflrtpeqcr tkfkslqtsy rkvkngqape
      481 tcpffeemda lvnarvaapp segqekeial cpvqetseae aekqaeqave aieddsedde
      541 edpeippeal trapvlfqsp sgfeagfene dnlkrdisee vqlhktllar serriprhln
      601 qrkgnesecr pgrqwedtpg eskgkpafpe rslgqvpshq rsylgersyk ylrygksfap
      661 yshpmhqlah qvenpykcad cgksfsrsar lirhrrihtg ekpyqcldcg ksfrdssnfi
      721 thrrihtgek pykcgecgkr fnqsssliih qrthtgekpy qceecgksfn nsshfsahrr
      781 ihtgerphvc pdcgksfsks sdlrahhrth tgekpygcqd cgkcfskssa lnkhreihtr
      841 ekllsqpapk saledl
//
LOCUS       XP_061015231             856 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger and SCAN domain-containing protein 29 isoform X1 [Dama
            dama].
ACCESSION   XP_061015231
VERSION     XP_061015231.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159248.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..856
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..856
                     /product="zinc finger and SCAN domain-containing protein
                     29 isoform X1"
                     /calculated_mol_wt=97270
     Region          13..123
                     /region_name="SCAN"
                     /note="leucine rich region; smart00431"
                     /db_xref="CDD:128708"
     Region          243..324
                     /region_name="Myb_DNA-bind_4"
                     /note="Myb/SANT-like DNA-binding domain; pfam13837"
                     /db_xref="CDD:463994"
     Region          406..487
                     /region_name="Myb_DNA-bind_4"
                     /note="Myb/SANT-like DNA-binding domain; pfam13837"
                     /db_xref="CDD:463994"
     Region          <674..834
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          678..698
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(683,685,687,689..690,693..694,697,711,713,717..718,
                     721..722,725,739,741,743,745..746,749..750,753)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          706..726
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(706,709,722,726)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          734..754
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          762..782
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          790..810
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          818..838
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..856
                     /gene="ZSCAN29"
                     /coded_by="XM_061159248.1:179..2749"
                     /db_xref="GeneID:133068151"
ORIGIN      
        1 makptlrgng snseafrqrf rkfhyqevag preafsqlwe lccrwlrpev rtkeqivell
       61 vleqfltvlp geiqnwvqkq cpesgeeavt lvedlerepg rpgrsvtvsv kgqevrlekm
      121 tplkssrell svrqesvepq prgvpkkera rspdlgpqeq mnpkeklrpf qrsgfpcsks
      181 smvskleqge pwipdlgske kelprgshie drrvpadllp srrersswad qdpwvledek
      241 vagvhwghee trtllailsq pefyealrnc hrnsqvygav aerlrefgfl rtleqcrtkf
      301 kglqknyrkv ksghppetcp ffeemealms aqvialpsng leeaashsgl ggsdaeteep
      361 epegwhhaeg daamaeesds davgqeatsq dpdssttpvl frspsgvhwg yeetktylai
      421 lsetqfyeal rnchrnsqly gavaerlwey gflrtpeqcr tkfkslqtsy rkvkngqape
      481 tcpffeemda lvnarvaapp segqekeial cpvqetseae aekqaeqave aieddsedde
      541 edpeippeal trapvlfqsp sgfeagfene dnlkrdisee vqlhktllar serriprhln
      601 qrkgnesecr pgrqwedtpg eskgkpafpe rslgqvpshq rsylgersyk ylrygksfap
      661 yshpmhqlah qvenpykcad cgksfsrsar lirhrrihtg ekpyqcldcg ksfrdssnfi
      721 thrrihtgek pykcgecgkr fnqsssliih qrthtgekpy qceecgksfn nsshfsahrr
      781 ihtgerphvc pdcgksfsks sdlrahhrth tgekpygcqd cgkcfskssa lnkhreihtr
      841 ekllsqpapk saledl
//
LOCUS       XP_061015232             708 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger and SCAN domain-containing protein 29 isoform X2 [Dama
            dama].
ACCESSION   XP_061015232
VERSION     XP_061015232.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159249.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..708
                     /product="zinc finger and SCAN domain-containing protein
                     29 isoform X2"
                     /calculated_mol_wt=80249
     Region          95..176
                     /region_name="Myb_DNA-bind_4"
                     /note="Myb/SANT-like DNA-binding domain; pfam13837"
                     /db_xref="CDD:463994"
     Region          258..339
                     /region_name="Myb_DNA-bind_4"
                     /note="Myb/SANT-like DNA-binding domain; pfam13837"
                     /db_xref="CDD:463994"
     Region          <526..686
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          530..550
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(535,537,539,541..542,545..546,549,563,565,569..570,
                     573..574,577,591,593,595,597..598,601..602,605)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          558..578
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(558,561,574,578)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          586..606
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          614..634
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          642..662
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          670..690
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..708
                     /gene="ZSCAN29"
                     /coded_by="XM_061159249.1:137..2263"
                     /db_xref="GeneID:133068151"
ORIGIN      
        1 msrkwrggsd sggrlrkraw ktwtfgfpcs kssmvskleq gepwipdlgs kekelprgsh
       61 iedrrvpadl lpsrrerssw adqdpwvled ekvagvhwgh eetrtllail sqpefyealr
      121 nchrnsqvyg avaerlrefg flrtleqcrt kfkglqknyr kvksghppet cpffeemeal
      181 msaqvialps ngleeaashs glggsdaete epepegwhha egdaamaees dsdavgqeat
      241 sqdpdssttp vlfrspsgvh wgyeetktyl ailsetqfye alrnchrnsq lygavaerlw
      301 eygflrtpeq crtkfkslqt syrkvkngqa petcpffeem dalvnarvaa ppsegqekei
      361 alcpvqetse aeaekqaeqa veaieddsed deedpeippe altrapvlfq spsgfeagfe
      421 nednlkrdis eevqlhktll arserriprh lnqrkgnese crpgrqwedt pgeskgkpaf
      481 perslgqvps hqrsylgers ykylrygksf apyshpmhql ahqvenpykc adcgksfsrs
      541 arlirhrrih tgekpyqcld cgksfrdssn fithrrihtg ekpykcgecg krfnqsssli
      601 ihqrthtgek pyqceecgks fnnsshfsah rrihtgerph vcpdcgksfs kssdlrahhr
      661 thtgekpygc qdcgkcfsks salnkhreih trekllsqpa pksaledl
//
LOCUS       XP_061015233             684 aa            linear   MAM 02-DEC-2023
DEFINITION  tRNA wybutosine-synthesizing protein 4 [Dama dama].
ACCESSION   XP_061015233
VERSION     XP_061015233.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159250.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..684
                     /product="tRNA wybutosine-synthesizing protein 4"
                     /calculated_mol_wt=75142
     Region          30..280
                     /region_name="YktD"
                     /note="O-Methyltransferase involved in polyketide
                     biosynthesis [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3315"
                     /db_xref="CDD:442544"
     Region          477..528
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..684
                     /gene="LCMT2"
                     /coded_by="XM_061159250.1:1..2055"
                     /db_xref="GeneID:133068152"
ORIGIN      
        1 mgsrsrerra eavqstndss alsksslaar gyvhdafaal lvpgtarrap lihrgyyvra
       61 ravrhcvraf vertcaapgs praqilslga gsdslyfrlk tagrlaeaav wevdfpdvae
      121 rkaqrirdtp dlcaltgpfq rgdpgsnlcf essdyrilgl dlrqlqrldq alaaagldaa
      181 aptlllaeav ltylepddaa aliawaaqrf snaifvvyeq mrpqdafgef mqqhfrhlns
      241 plhgldrfpd aeaqqkrflq agwtacramd lnefyrsflp aeerrrvenl epfdefeewh
      301 lkcahyfila asrgdslsqt lvfppsemlp ridpappsgv fpasvvtgdt qgpglrrygh
      361 asvllspgvi lsaggfgeqe grhcrvskfh mllrysdfew kgnqigswgt gaqwdgrlyh
      421 tmtrlsdtqv lvlggrlspv tpalgilqls cekednssed pnvtvtkfsp edstlsrwrh
      481 sttevscenq kylfvyggrs vaepvlsgwh flhvgtmtwv sipvegegpe grhshsacsw
      541 qggaliaggl gaseeplssv fflkpitcgf lwesiaiqpp itpryshtah vdngklllvg
      601 gvwihssavp gvtvidlstg lsfeyridtt cvpwplmlhn htsilfpeeq qllllggggn
      661 cfsfgtyfnp htvtldlssl sarq
//
LOCUS       XP_061015234             684 aa            linear   MAM 02-DEC-2023
DEFINITION  tRNA wybutosine-synthesizing protein 4 [Dama dama].
ACCESSION   XP_061015234
VERSION     XP_061015234.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159251.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..684
                     /product="tRNA wybutosine-synthesizing protein 4"
                     /calculated_mol_wt=75142
     Region          30..280
                     /region_name="YktD"
                     /note="O-Methyltransferase involved in polyketide
                     biosynthesis [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3315"
                     /db_xref="CDD:442544"
     Region          477..528
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..684
                     /gene="LCMT2"
                     /coded_by="XM_061159251.1:1..2055"
                     /db_xref="GeneID:133068152"
ORIGIN      
        1 mgsrsrerra eavqstndss alsksslaar gyvhdafaal lvpgtarrap lihrgyyvra
       61 ravrhcvraf vertcaapgs praqilslga gsdslyfrlk tagrlaeaav wevdfpdvae
      121 rkaqrirdtp dlcaltgpfq rgdpgsnlcf essdyrilgl dlrqlqrldq alaaagldaa
      181 aptlllaeav ltylepddaa aliawaaqrf snaifvvyeq mrpqdafgef mqqhfrhlns
      241 plhgldrfpd aeaqqkrflq agwtacramd lnefyrsflp aeerrrvenl epfdefeewh
      301 lkcahyfila asrgdslsqt lvfppsemlp ridpappsgv fpasvvtgdt qgpglrrygh
      361 asvllspgvi lsaggfgeqe grhcrvskfh mllrysdfew kgnqigswgt gaqwdgrlyh
      421 tmtrlsdtqv lvlggrlspv tpalgilqls cekednssed pnvtvtkfsp edstlsrwrh
      481 sttevscenq kylfvyggrs vaepvlsgwh flhvgtmtwv sipvegegpe grhshsacsw
      541 qggaliaggl gaseeplssv fflkpitcgf lwesiaiqpp itpryshtah vdngklllvg
      601 gvwihssavp gvtvidlstg lsfeyridtt cvpwplmlhn htsilfpeeq qllllggggn
      661 cfsfgtyfnp htvtldlssl sarq
//
LOCUS       XP_061015235             666 aa            linear   MAM 02-DEC-2023
DEFINITION  gamma-tubulin complex component 4 [Dama dama].
ACCESSION   XP_061015235
VERSION     XP_061015235.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159252.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..666
                     /product="gamma-tubulin complex component 4"
                     /calculated_mol_wt=75783
     Region          2..347
                     /region_name="GCP_N_terminal"
                     /note="Gamma tubulin complex component N-terminal;
                     pfam17681"
                     /db_xref="CDD:465456"
     Region          350..654
                     /region_name="GCP_C_terminal"
                     /note="Gamma tubulin complex component C-terminal;
                     pfam04130"
                     /db_xref="CDD:461187"
     CDS             1..666
                     /gene="TUBGCP4"
                     /coded_by="XM_061159252.1:63..2063"
                     /db_xref="GeneID:133068153"
ORIGIN      
        1 mihelllals gypgsiftwn krsglqvsqd fpflhpsets vlnrlcrlgt dyirftefie
       61 qytghvqqqd hhpsqqgqgg shgiylrafc tgldsvlqpy rqalldleqe fladphlsis
      121 hvnysldqfq llfpsvmvvv eqiksqkihg cqiletvykh scgglppvrs alekilavch
      181 gvmykqlsaw mlhgllldqh eeffikqgps sgnvsaqpee deedlgiggl tgkqlrelqd
      241 lrlieeenml apslkqfslr veilpsyipv rvaekilfvg esvqmfenqn vnltrkgsil
      301 knqedtfaae lhrlkqqplf slvdfeqlvd rirsavaehl wklmveesdl lgqlkiikdf
      361 yllgrgelfq afidtaqhml ktpptavteh dvnvafqqsa hkvlldddnl lpllhlaiey
      421 hgkehrdatq aregpsrets preapasgwa alglsykvqw plhilftpav lekynvvfky
      481 llsvrrvqae lqhcwalqmq rkhlksnqtd avkwrlrnhm aflvdnlqyy lqvdvlesqf
      541 sqllhqinst rdfesirlah dhflsnllaq sfillkpvfh clneildlch sfcslvsqnl
      601 gpldergaaq lsilvkgfsr qssllfkils svrnhqinsd laqlllrldy nkyytqaggt
      661 lgsfgm
//
LOCUS       XP_061015236             351 aa            linear   MAM 02-DEC-2023
DEFINITION  adenosine deaminase-like protein [Dama dama].
ACCESSION   XP_061015236
VERSION     XP_061015236.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159253.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..351
                     /product="adenosine deaminase-like protein"
                     /calculated_mol_wt=39558
     Region          17..344
                     /region_name="ADA_AMPD"
                     /note="Adenosine/AMP deaminase. Adenosine deaminases
                     (ADAs) are present in pro- and eukaryotic organisms and
                     catalyze the zinc dependent irreversible deamination of
                     adenosine nucleosides to inosine nucleosides and ammonia.
                     The eukaryotic AMP deaminase...; cd00443"
                     /db_xref="CDD:238250"
     Site            order(23,25,207,210,231,292..293)
                     /site_type="active"
                     /db_xref="CDD:238250"
     CDS             1..351
                     /gene="ADAL"
                     /coded_by="XM_061159253.1:462..1517"
                     /db_xref="GeneID:133068154"
ORIGIN      
        1 mmeaeeqpwk ttfysklpkv elhahlngsi ssntikklia kkpdlkihdq mtmidkgkrr
       61 tleeclqifq iihllttspe dvlmvtkdvi kefaddgvky lelrstpree natgmtkkty
      121 vesilegikq skeenvdidv rylisidrrg gpsaakeavk laeefflste dtvlgldlsg
      181 dpaagqakdf leplleakks glklalhise ipnqktetqv llnlfpdrig hgtflnsske
      241 gspdlvdfvr qhqiplelcl tsnvksqtvp sydqhhfgfw ysiahpavic tddkgvfath
      301 lsqeyqlaae tfhltqsqvw dlsyesisyi fasdstkadl kkkwshlkph f
//
LOCUS       XP_061015237             351 aa            linear   MAM 02-DEC-2023
DEFINITION  adenosine deaminase-like protein [Dama dama].
ACCESSION   XP_061015237
VERSION     XP_061015237.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159254.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..351
                     /product="adenosine deaminase-like protein"
                     /calculated_mol_wt=39558
     Region          17..344
                     /region_name="ADA_AMPD"
                     /note="Adenosine/AMP deaminase. Adenosine deaminases
                     (ADAs) are present in pro- and eukaryotic organisms and
                     catalyze the zinc dependent irreversible deamination of
                     adenosine nucleosides to inosine nucleosides and ammonia.
                     The eukaryotic AMP deaminase...; cd00443"
                     /db_xref="CDD:238250"
     Site            order(23,25,207,210,231,292..293)
                     /site_type="active"
                     /db_xref="CDD:238250"
     CDS             1..351
                     /gene="ADAL"
                     /coded_by="XM_061159254.1:418..1473"
                     /db_xref="GeneID:133068154"
ORIGIN      
        1 mmeaeeqpwk ttfysklpkv elhahlngsi ssntikklia kkpdlkihdq mtmidkgkrr
       61 tleeclqifq iihllttspe dvlmvtkdvi kefaddgvky lelrstpree natgmtkkty
      121 vesilegikq skeenvdidv rylisidrrg gpsaakeavk laeefflste dtvlgldlsg
      181 dpaagqakdf leplleakks glklalhise ipnqktetqv llnlfpdrig hgtflnsske
      241 gspdlvdfvr qhqiplelcl tsnvksqtvp sydqhhfgfw ysiahpavic tddkgvfath
      301 lsqeyqlaae tfhltqsqvw dlsyesisyi fasdstkadl kkkwshlkph f
//
LOCUS       XP_061015238             351 aa            linear   MAM 02-DEC-2023
DEFINITION  adenosine deaminase-like protein [Dama dama].
ACCESSION   XP_061015238
VERSION     XP_061015238.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159255.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..351
                     /product="adenosine deaminase-like protein"
                     /calculated_mol_wt=39558
     Region          17..344
                     /region_name="ADA_AMPD"
                     /note="Adenosine/AMP deaminase. Adenosine deaminases
                     (ADAs) are present in pro- and eukaryotic organisms and
                     catalyze the zinc dependent irreversible deamination of
                     adenosine nucleosides to inosine nucleosides and ammonia.
                     The eukaryotic AMP deaminase...; cd00443"
                     /db_xref="CDD:238250"
     Site            order(23,25,207,210,231,292..293)
                     /site_type="active"
                     /db_xref="CDD:238250"
     CDS             1..351
                     /gene="ADAL"
                     /coded_by="XM_061159255.1:462..1517"
                     /db_xref="GeneID:133068154"
ORIGIN      
        1 mmeaeeqpwk ttfysklpkv elhahlngsi ssntikklia kkpdlkihdq mtmidkgkrr
       61 tleeclqifq iihllttspe dvlmvtkdvi kefaddgvky lelrstpree natgmtkkty
      121 vesilegikq skeenvdidv rylisidrrg gpsaakeavk laeefflste dtvlgldlsg
      181 dpaagqakdf leplleakks glklalhise ipnqktetqv llnlfpdrig hgtflnsske
      241 gspdlvdfvr qhqiplelcl tsnvksqtvp sydqhhfgfw ysiahpavic tddkgvfath
      301 lsqeyqlaae tfhltqsqvw dlsyesisyi fasdstkadl kkkwshlkph f
//
LOCUS       XP_061015239            3101 aa            linear   MAM 02-DEC-2023
DEFINITION  microtubule-associated protein 1A [Dama dama].
ACCESSION   XP_061015239
VERSION     XP_061015239.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159256.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3101
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..3101
                     /product="microtubule-associated protein 1A"
                     /calculated_mol_wt=335577
     Region          284..>387
                     /region_name="ComEC"
                     /note="DNA uptake channel protein ComEC C-terminal domain,
                     metallo-beta-lactamase superfamily [Intracellular
                     trafficking, secretion, and vesicular transport]; COG2333"
                     /db_xref="CDD:441904"
     Region          558..>646
                     /region_name="rplD"
                     /note="50S ribosomal protein L4; Provisional; PRK14907"
                     /db_xref="CDD:184900"
     Region          <1588..>1989
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          <1914..>2453
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     Region          <2332..2916
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..3101
                     /gene="MAP1A"
                     /coded_by="XM_061159256.1:1..9306"
                     /db_xref="GeneID:133068157"
ORIGIN      
        1 meteagpgqp rgvametspg lglrspgspp aqnpaeplre agavvaaarw dlrkhslliv
       61 igdiatesql ravrahleqg ilswnidlss idlnqqlrlf itrhlahfss evkgqrtlch
      121 qseiletvil vnpsadsiss evhhllssps ahkllilsgq slepggdlil qsgtysyqnf
      181 aqvlhnpeia qllsnkdpgi qafltvsclg egdwshlgla ssqetlhlrl npeptlptmd
      241 gvaefseyvs etvdvpspfd llepptsggf lklskpccyi fpggrgdsal favngfnilv
      301 dggsdrkscf wklvrhldri dsvllthiga dnlpgingll qrkvaeleee qsqgsssysd
      361 wvknlispel gvvffnvpdk lrlpdasrka krsieeaclt lqhlnrlgih aeplyrvvsn
      421 tiepltlfhk mgvgrldmyv lnpvkdskem qflmqkwagn skaktgivla ngkeaeisvp
      481 yltsitalvv wlpanpteki vrvlfpgnap qnkileglek lrhldflryp vatqkdlatg
      541 avpanlkpsk ikqradskes lkattktpvg klakreevae egakearsel akelaktekk
      601 akessekppe kpakpervkt essealkaek rklikdkvgk khpkekiskl eekkdkekke
      661 ikkerkelkk degrkeekkd akkeekkkdt kpevkkiskp dlkpftpevr ktlykakapg
      721 rvktdksrat rgdkelssep rtppaqkgaa plptrelals spedltqdfe elkreerell
      781 teqrdtrlge kplppdtaee glpstaalva ppsvpgpeae apvvkekevv pdvpeerggk
      841 drgpdsgaet eeeketweek kpkeaegvpd gteareesep evkedvieka eleemeelpp
      901 sdeeeeeetk aegfyqkhiq ealkvmprak ealggrepgl qgkapekets sflsslatpa
      961 gatehvsyiq detipgyset eqtisdeeih depeeraapp rfpigtydlp gpegpgpfea
     1021 sqpadsavpa taskaygape teltyppnmv aaplaeeehv ssatsitecd klssfatsva
     1081 edqsvaslta pqteetgkss llldtvtsip ssrteatqgl dyvpsagtis ptssleedkg
     1141 fksppyddfs vtgesekrge mvgrglsger aveeeeeeet aniqmseklh gqygppmfaa
     1201 pghalhpgep algeaeercl spddstvkma spppsgppsa thtpfhqspv eeksepqdfq
     1261 eadswgdtks ipgvgkevaa eeaakpgpdk gtleeegkap pptspqaqea pislaggqpg
     1321 rtiqllpeqd kaivletvea gepagpvpet ealpgdfrts lqelgepqke evlqipdrgl
     1381 speeaeslsv lsvvspdtak kqdttprspc glmeqrlhtd lwpqgspedt rslslseesp
     1441 sketsldiss kqlspeslgt lqfgelslgk eekgplmqae dttchlapvs ipearaatvs
     1501 pptdgtsgys araditdesp dgklpassfs ptallgdgrr spgvitslge hiltpdsslt
     1561 kspeslpspa medivmeweg kvpklkdrps eqkekgpept devlqqqdkt leqrdtvmeq
     1621 rdtaicqkde ileekdkage aqdqaveqkg rdseyretap eqkdqapegk dkdlepkdrg
     1681 lehrdiapeq kdqalegkdk dsepkdrdse hretapeqkd qapegkdkdl epedrglehr
     1741 dtapeqkdqa pegkdkdlep kdrdleakdk aleqedkvpe ekdkileqki rdlehkdtvp
     1801 eetvpalkgk aleqkdease qdkapeekdk aqkdqapeqk dqdlaqkywa leqkaealeq
     1861 tikaaeqkdk fleekdktqe qespvqedkt mapkekilee kspekvkave qkeeavleks
     1921 kalgleespv qedkareqee kyqkeqdvvq ewretspsss elageqkepa rtwedtspeq
     1981 edtywrgred vvlgqdtywq elscerkvwf phelggpgar pryteerest fldegpddeq
     2041 evpplehtpq spwasdfkgf qepapqkgle verwlaespv glppeeedkl trspfeiisp
     2101 pasppemagq rvlpalgqes pipdpnllpp vrdepttrsw ladippwvpk drplppapls
     2161 papapptpap ephtpapfsw gtaegegvma avqegaaele ggpysplgkd yrkaegeree
     2221 eagvpdhspr ssqvpkases haseepeqte peqreptpyp dersfqyadi yeqmmltglg
     2281 pacptreppl gaagdwpphi stkeeaagrd tpaekelssp vsphslqfdt pafsyaalag
     2341 ptvpprqepe pepgmhpslt ppavpprapi pqsqgpsppl nghilscspd rrtpspkepg
     2401 rgpwddspsd selekgareq pekeaqspsp pyptpagpsa lwpesearts pssdshlgpa
     2461 rpsldfpasa fgfsslqpap pqlpspaepr sapcgslafs gdralalapg ppararhdey
     2521 levtkapsld sslpqlpspg spgapllssl prpaspalse gssseattpv issvaerfpp
     2581 vlgaaepasr qlvpgmeaaa hglwdlapls pappasldla papapslpgd mddgtlpcrl
     2641 ecsgvaakkp spsqgpsedg atngptetsp kppgpapaea eacpawerga wpegaerspr
     2701 pdtllspeqp tcpgaapgdq prssspetea gpqgcaaepr ahrgelslsf lnpplprstd
     2761 dsdpsteear lvgrggrrra gapgatggpc pmadetppts asdsgssqsd sdvppeteec
     2821 psitaeaald sdedgdflpv dkaggvsgth hprpghdppp lpqpdprpap prpdvcmadp
     2881 eglssesgrv erlrekekaq gragrrapsr akpasparrl dlrgkrsptp gkgtadrasr
     2941 vpprprstps qvtpaeekdg hspmskglvn glkagptalg sksgsgapvy vdlayipnhc
     3001 sgktadldff rrvrasyyvv sgndpangep sravldalle gkaqwgenlq vtlipthdte
     3061 vtrewyqqth eqqqqlnvlv lassstvvmq desfpackie f
//
LOCUS       XP_061015241            1488 aa            linear   MAM 02-DEC-2023
DEFINITION  inositol hexakisphosphate and diphosphoinositol-pentakisphosphate
            kinase 1 isoform X1 [Dama dama].
ACCESSION   XP_061015241
VERSION     XP_061015241.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159258.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1488
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1488
                     /product="inositol hexakisphosphate and
                     diphosphoinositol-pentakisphosphate kinase 1 isoform X1"
                     /calculated_mol_wt=164822
     Region          55..144
                     /region_name="PPIP5K2_N"
                     /note="Diphosphoinositol pentakisphosphate kinase 2
                     N-terminal domain; pfam18086"
                     /db_xref="CDD:465643"
     Region          <144..337
                     /region_name="LysX"
                     /note="Glutathione synthase, LysX or RimK-type ligase,
                     ATP-grasp superfamily [Amino acid transport and
                     metabolism, Coenzyme transport and metabolism,
                     Translation, ribosomal structure and biogenesis, Secondary
                     metabolites biosynthesis, transport and catabolism];
                     COG0189"
                     /db_xref="CDD:439959"
     Region          390..906
                     /region_name="His_Phos_2"
                     /note="Histidine phosphatase superfamily (branch 2);
                     pfam00328"
                     /db_xref="CDD:395259"
     CDS             1..1488
                     /gene="PPIP5K1"
                     /coded_by="XM_061159258.1:190..4656"
                     /db_xref="GeneID:133068159"
ORIGIN      
        1 mwslpasege satahfflga gdeglgprgl gmrpeesdse lledeedevp pepqiivgic
       61 amtkkskskp mtqilerlcr fdyltviilg edvilnepve nwpschclis fhskgfpldk
      121 avaysklrnp flindlamqy yiqdrrevyr ilqeegidlp ryavlnrdpa rpeecnlieg
      181 edqvevngai fpkpfvekpv saedhnvyiy ypssagggsq rlfrkigsrs svyspessvr
      241 ktgsyiyeef mptdgtdvkv ytvgpdyaha earkspaldg kverdsegke irypvmltam
      301 eklvarkvcv afkqtvcgfd llranghsfv cdvngfsfvk nsmkyyddca kilgntimre
      361 lapqfqipws ipmeaedipi vpttsgtmme lrcviaiirh gdrtpkqkmk mevthprffs
      421 lfekhggykt gklklkrpeq lqevlditrl llaelekepg geieektgkl eqlksvlemy
      481 ghfsginrkv qltyyphgvk asnegqdtqr ealapslllv lkwggeltpa grvqaeelgr
      541 afrcmypggq gdyagfpgcg llrlhstfrh dlkiyasdeg rvqmtaaafa kgllalegel
      601 tpilvqmvks anmnglldsd gdslsscqhr vkarlhhilq qdapfgpedy dqlaptgsts
      661 llssmaviqn pvkvcdqvfd lienlthqir ermqdpksvd lqlyhsetle lmlqrwskle
      721 rdfrqksgry diskipdiyd cvkydvqhng slglegtael lrlskaladv vipqeygisr
      781 eekleiavgf clpllrkill dlqrthedes vnklhplysr gvlspgrhvr trlyftsesh
      841 vhsllsvfry gglldetkdt qwqralayls aipelnymtq ivimlyednt rdplseerfh
      901 velhfspgvk gveeegsapt gcgfrpasse neerkadqgs vedlcpgnas depdralqts
      961 plpsegpglp kksplirnrk agsmevlset sssrpggyrl fsssrpptem kqsglgsqct
     1021 glfsttvlgg sssapnlqdy arsqgkklpp aslkhrdell fvpavkrfsv sfakhptngf
     1081 egcsmvptiy pletlhnals lrqvseflsr vcqrhteaqa qasaalfdsm hsnqasdspf
     1141 spprtlhspt lqlqqrsekp pwyssgpsst vssagpsspt avdgncpfgf sdqpslsshm
     1201 tegyqdlrll qeapgsgaqe pplegqqepf eqnqspqepp vetnqpcqev aeeisqpcqe
     1261 apdssqpcqd ipeevsqpcq qlsdirqlce enrddvnqtc qevpqisqpc qdasqlyqkv
     1321 skeacelcqe nseevnqpcq rvpvetgrlv hgfpvgvdgp aqevlgeagk ptqeipeels
     1381 qscqefsvdi grltqgasai nllsqdtpev dnpplefpge valqaqevse wvnqqqsyvv
     1441 peligqlsge dvpqvqcpps nanpqsqsla pdqnaplppa tcessfsh
//
LOCUS       XP_061015242            1488 aa            linear   MAM 02-DEC-2023
DEFINITION  inositol hexakisphosphate and diphosphoinositol-pentakisphosphate
            kinase 1 isoform X1 [Dama dama].
ACCESSION   XP_061015242
VERSION     XP_061015242.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159259.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1488
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1488
                     /product="inositol hexakisphosphate and
                     diphosphoinositol-pentakisphosphate kinase 1 isoform X1"
                     /calculated_mol_wt=164822
     Region          55..144
                     /region_name="PPIP5K2_N"
                     /note="Diphosphoinositol pentakisphosphate kinase 2
                     N-terminal domain; pfam18086"
                     /db_xref="CDD:465643"
     Region          <144..337
                     /region_name="LysX"
                     /note="Glutathione synthase, LysX or RimK-type ligase,
                     ATP-grasp superfamily [Amino acid transport and
                     metabolism, Coenzyme transport and metabolism,
                     Translation, ribosomal structure and biogenesis, Secondary
                     metabolites biosynthesis, transport and catabolism];
                     COG0189"
                     /db_xref="CDD:439959"
     Region          390..906
                     /region_name="His_Phos_2"
                     /note="Histidine phosphatase superfamily (branch 2);
                     pfam00328"
                     /db_xref="CDD:395259"
     CDS             1..1488
                     /gene="PPIP5K1"
                     /coded_by="XM_061159259.1:233..4699"
                     /db_xref="GeneID:133068159"
ORIGIN      
        1 mwslpasege satahfflga gdeglgprgl gmrpeesdse lledeedevp pepqiivgic
       61 amtkkskskp mtqilerlcr fdyltviilg edvilnepve nwpschclis fhskgfpldk
      121 avaysklrnp flindlamqy yiqdrrevyr ilqeegidlp ryavlnrdpa rpeecnlieg
      181 edqvevngai fpkpfvekpv saedhnvyiy ypssagggsq rlfrkigsrs svyspessvr
      241 ktgsyiyeef mptdgtdvkv ytvgpdyaha earkspaldg kverdsegke irypvmltam
      301 eklvarkvcv afkqtvcgfd llranghsfv cdvngfsfvk nsmkyyddca kilgntimre
      361 lapqfqipws ipmeaedipi vpttsgtmme lrcviaiirh gdrtpkqkmk mevthprffs
      421 lfekhggykt gklklkrpeq lqevlditrl llaelekepg geieektgkl eqlksvlemy
      481 ghfsginrkv qltyyphgvk asnegqdtqr ealapslllv lkwggeltpa grvqaeelgr
      541 afrcmypggq gdyagfpgcg llrlhstfrh dlkiyasdeg rvqmtaaafa kgllalegel
      601 tpilvqmvks anmnglldsd gdslsscqhr vkarlhhilq qdapfgpedy dqlaptgsts
      661 llssmaviqn pvkvcdqvfd lienlthqir ermqdpksvd lqlyhsetle lmlqrwskle
      721 rdfrqksgry diskipdiyd cvkydvqhng slglegtael lrlskaladv vipqeygisr
      781 eekleiavgf clpllrkill dlqrthedes vnklhplysr gvlspgrhvr trlyftsesh
      841 vhsllsvfry gglldetkdt qwqralayls aipelnymtq ivimlyednt rdplseerfh
      901 velhfspgvk gveeegsapt gcgfrpasse neerkadqgs vedlcpgnas depdralqts
      961 plpsegpglp kksplirnrk agsmevlset sssrpggyrl fsssrpptem kqsglgsqct
     1021 glfsttvlgg sssapnlqdy arsqgkklpp aslkhrdell fvpavkrfsv sfakhptngf
     1081 egcsmvptiy pletlhnals lrqvseflsr vcqrhteaqa qasaalfdsm hsnqasdspf
     1141 spprtlhspt lqlqqrsekp pwyssgpsst vssagpsspt avdgncpfgf sdqpslsshm
     1201 tegyqdlrll qeapgsgaqe pplegqqepf eqnqspqepp vetnqpcqev aeeisqpcqe
     1261 apdssqpcqd ipeevsqpcq qlsdirqlce enrddvnqtc qevpqisqpc qdasqlyqkv
     1321 skeacelcqe nseevnqpcq rvpvetgrlv hgfpvgvdgp aqevlgeagk ptqeipeels
     1381 qscqefsvdi grltqgasai nllsqdtpev dnpplefpge valqaqevse wvnqqqsyvv
     1441 peligqlsge dvpqvqcpps nanpqsqsla pdqnaplppa tcessfsh
//
LOCUS       XP_061015243            1467 aa            linear   MAM 02-DEC-2023
DEFINITION  inositol hexakisphosphate and diphosphoinositol-pentakisphosphate
            kinase 1 isoform X2 [Dama dama].
ACCESSION   XP_061015243
VERSION     XP_061015243.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159260.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1467
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1467
                     /product="inositol hexakisphosphate and
                     diphosphoinositol-pentakisphosphate kinase 1 isoform X2"
                     /calculated_mol_wt=162453
     Region          55..144
                     /region_name="PPIP5K2_N"
                     /note="Diphosphoinositol pentakisphosphate kinase 2
                     N-terminal domain; pfam18086"
                     /db_xref="CDD:465643"
     Region          <144..337
                     /region_name="LysX"
                     /note="Glutathione synthase, LysX or RimK-type ligase,
                     ATP-grasp superfamily [Amino acid transport and
                     metabolism, Coenzyme transport and metabolism,
                     Translation, ribosomal structure and biogenesis, Secondary
                     metabolites biosynthesis, transport and catabolism];
                     COG0189"
                     /db_xref="CDD:439959"
     Region          390..906
                     /region_name="His_Phos_2"
                     /note="Histidine phosphatase superfamily (branch 2);
                     pfam00328"
                     /db_xref="CDD:395259"
     CDS             1..1467
                     /gene="PPIP5K1"
                     /coded_by="XM_061159260.1:191..4594"
                     /db_xref="GeneID:133068159"
ORIGIN      
        1 mwslpasege satahfflga gdeglgprgl gmrpeesdse lledeedevp pepqiivgic
       61 amtkkskskp mtqilerlcr fdyltviilg edvilnepve nwpschclis fhskgfpldk
      121 avaysklrnp flindlamqy yiqdrrevyr ilqeegidlp ryavlnrdpa rpeecnlieg
      181 edqvevngai fpkpfvekpv saedhnvyiy ypssagggsq rlfrkigsrs svyspessvr
      241 ktgsyiyeef mptdgtdvkv ytvgpdyaha earkspaldg kverdsegke irypvmltam
      301 eklvarkvcv afkqtvcgfd llranghsfv cdvngfsfvk nsmkyyddca kilgntimre
      361 lapqfqipws ipmeaedipi vpttsgtmme lrcviaiirh gdrtpkqkmk mevthprffs
      421 lfekhggykt gklklkrpeq lqevlditrl llaelekepg geieektgkl eqlksvlemy
      481 ghfsginrkv qltyyphgvk asnegqdtqr ealapslllv lkwggeltpa grvqaeelgr
      541 afrcmypggq gdyagfpgcg llrlhstfrh dlkiyasdeg rvqmtaaafa kgllalegel
      601 tpilvqmvks anmnglldsd gdslsscqhr vkarlhhilq qdapfgpedy dqlaptgsts
      661 llssmaviqn pvkvcdqvfd lienlthqir ermqdpksvd lqlyhsetle lmlqrwskle
      721 rdfrqksgry diskipdiyd cvkydvqhng slglegtael lrlskaladv vipqeygisr
      781 eekleiavgf clpllrkill dlqrthedes vnklhplysr gvlspgrhvr trlyftsesh
      841 vhsllsvfry gglldetkdt qwqralayls aipelnymtq ivimlyednt rdplseerfh
      901 velhfspgvk gveeegsapt gcgfrpasse neerkadqgs vedlcpgnas depdralqts
      961 plpsegpglp kksplirnrk agsmevlset sssrpggyrl fsssrpptem kqsglgsqct
     1021 glfsttvlgg sssapnlqdy arsqgkklpp aslkhrdgfe gcsmvptiyp letlhnalsl
     1081 rqvseflsrv cqrhteaqaq asaalfdsmh snqasdspfs pprtlhsptl qlqqrsekpp
     1141 wyssgpsstv ssagpsspta vdgncpfgfs dqpslsshmt egyqdlrllq eapgsgaqep
     1201 plegqqepfe qnqspqeppv etnqpcqeva eeisqpcqea pdssqpcqdi peevsqpcqq
     1261 lsdirqlcee nrddvnqtcq evpqisqpcq dasqlyqkvs keacelcqen seevnqpcqr
     1321 vpvetgrlvh gfpvgvdgpa qevlgeagkp tqeipeelsq scqefsvdig rltqgasain
     1381 llsqdtpevd npplefpgev alqaqevsew vnqqqsyvvp eligqlsged vpqvqcppsn
     1441 anpqsqslap dqnaplppat cessfsh
//
LOCUS       XP_061015244            1425 aa            linear   MAM 02-DEC-2023
DEFINITION  inositol hexakisphosphate and diphosphoinositol-pentakisphosphate
            kinase 1 isoform X3 [Dama dama].
ACCESSION   XP_061015244
VERSION     XP_061015244.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159261.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1425
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1425
                     /product="inositol hexakisphosphate and
                     diphosphoinositol-pentakisphosphate kinase 1 isoform X3"
                     /calculated_mol_wt=158109
     Region          55..144
                     /region_name="PPIP5K2_N"
                     /note="Diphosphoinositol pentakisphosphate kinase 2
                     N-terminal domain; pfam18086"
                     /db_xref="CDD:465643"
     Region          <144..337
                     /region_name="LysX"
                     /note="Glutathione synthase, LysX or RimK-type ligase,
                     ATP-grasp superfamily [Amino acid transport and
                     metabolism, Coenzyme transport and metabolism,
                     Translation, ribosomal structure and biogenesis, Secondary
                     metabolites biosynthesis, transport and catabolism];
                     COG0189"
                     /db_xref="CDD:439959"
     Region          390..906
                     /region_name="His_Phos_2"
                     /note="Histidine phosphatase superfamily (branch 2);
                     pfam00328"
                     /db_xref="CDD:395259"
     CDS             1..1425
                     /gene="PPIP5K1"
                     /coded_by="XM_061159261.1:192..4469"
                     /db_xref="GeneID:133068159"
ORIGIN      
        1 mwslpasege satahfflga gdeglgprgl gmrpeesdse lledeedevp pepqiivgic
       61 amtkkskskp mtqilerlcr fdyltviilg edvilnepve nwpschclis fhskgfpldk
      121 avaysklrnp flindlamqy yiqdrrevyr ilqeegidlp ryavlnrdpa rpeecnlieg
      181 edqvevngai fpkpfvekpv saedhnvyiy ypssagggsq rlfrkigsrs svyspessvr
      241 ktgsyiyeef mptdgtdvkv ytvgpdyaha earkspaldg kverdsegke irypvmltam
      301 eklvarkvcv afkqtvcgfd llranghsfv cdvngfsfvk nsmkyyddca kilgntimre
      361 lapqfqipws ipmeaedipi vpttsgtmme lrcviaiirh gdrtpkqkmk mevthprffs
      421 lfekhggykt gklklkrpeq lqevlditrl llaelekepg geieektgkl eqlksvlemy
      481 ghfsginrkv qltyyphgvk asnegqdtqr ealapslllv lkwggeltpa grvqaeelgr
      541 afrcmypggq gdyagfpgcg llrlhstfrh dlkiyasdeg rvqmtaaafa kgllalegel
      601 tpilvqmvks anmnglldsd gdslsscqhr vkarlhhilq qdapfgpedy dqlaptgsts
      661 llssmaviqn pvkvcdqvfd lienlthqir ermqdpksvd lqlyhsetle lmlqrwskle
      721 rdfrqksgry diskipdiyd cvkydvqhng slglegtael lrlskaladv vipqeygisr
      781 eekleiavgf clpllrkill dlqrthedes vnklhplysr gvlspgrhvr trlyftsesh
      841 vhsllsvfry gglldetkdt qwqralayls aipelnymtq ivimlyednt rdplseerfh
      901 velhfspgvk gveeegsapt gcgfrpasse neerkadqgs vedlcpgnas depdralqts
      961 plpsegpglp kksplirnrk agsmevlset sssrpggyrl fsssrpptem kqsglgfegc
     1021 smvptiyple tlhnalslrq vseflsrvcq rhteaqaqas aalfdsmhsn qasdspfspp
     1081 rtlhsptlql qqrsekppwy ssgpsstvss agpssptavd gncpfgfsdq pslsshmteg
     1141 yqdlrllqea pgsgaqeppl egqqepfeqn qspqeppvet nqpcqevaee isqpcqeapd
     1201 ssqpcqdipe evsqpcqqls dirqlceenr ddvnqtcqev pqisqpcqda sqlyqkvske
     1261 acelcqense evnqpcqrvp vetgrlvhgf pvgvdgpaqe vlgeagkptq eipeelsqsc
     1321 qefsvdigrl tqgasainll sqdtpevdnp plefpgeval qaqevsewvn qqqsyvvpel
     1381 igqlsgedvp qvqcppsnan pqsqslapdq naplppatce ssfsh
//
LOCUS       XP_061015245            1549 aa            linear   MAM 02-DEC-2023
DEFINITION  inositol hexakisphosphate and diphosphoinositol-pentakisphosphate
            kinase 1 isoform X4 [Dama dama].
ACCESSION   XP_061015245
VERSION     XP_061015245.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159262.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1549
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1549
                     /product="inositol hexakisphosphate and
                     diphosphoinositol-pentakisphosphate kinase 1 isoform X4"
                     /calculated_mol_wt=171880
     Region          55..144
                     /region_name="PPIP5K2_N"
                     /note="Diphosphoinositol pentakisphosphate kinase 2
                     N-terminal domain; pfam18086"
                     /db_xref="CDD:465643"
     Region          <144..337
                     /region_name="LysX"
                     /note="Glutathione synthase, LysX or RimK-type ligase,
                     ATP-grasp superfamily [Amino acid transport and
                     metabolism, Coenzyme transport and metabolism,
                     Translation, ribosomal structure and biogenesis, Secondary
                     metabolites biosynthesis, transport and catabolism];
                     COG0189"
                     /db_xref="CDD:439959"
     Region          390..906
                     /region_name="His_Phos_2"
                     /note="Histidine phosphatase superfamily (branch 2);
                     pfam00328"
                     /db_xref="CDD:395259"
     CDS             1..1549
                     /gene="PPIP5K1"
                     /coded_by="XM_061159262.1:194..4843"
                     /db_xref="GeneID:133068159"
ORIGIN      
        1 mwslpasege satahfflga gdeglgprgl gmrpeesdse lledeedevp pepqiivgic
       61 amtkkskskp mtqilerlcr fdyltviilg edvilnepve nwpschclis fhskgfpldk
      121 avaysklrnp flindlamqy yiqdrrevyr ilqeegidlp ryavlnrdpa rpeecnlieg
      181 edqvevngai fpkpfvekpv saedhnvyiy ypssagggsq rlfrkigsrs svyspessvr
      241 ktgsyiyeef mptdgtdvkv ytvgpdyaha earkspaldg kverdsegke irypvmltam
      301 eklvarkvcv afkqtvcgfd llranghsfv cdvngfsfvk nsmkyyddca kilgntimre
      361 lapqfqipws ipmeaedipi vpttsgtmme lrcviaiirh gdrtpkqkmk mevthprffs
      421 lfekhggykt gklklkrpeq lqevlditrl llaelekepg geieektgkl eqlksvlemy
      481 ghfsginrkv qltyyphgvk asnegqdtqr ealapslllv lkwggeltpa grvqaeelgr
      541 afrcmypggq gdyagfpgcg llrlhstfrh dlkiyasdeg rvqmtaaafa kgllalegel
      601 tpilvqmvks anmnglldsd gdslsscqhr vkarlhhilq qdapfgpedy dqlaptgsts
      661 llssmaviqn pvkvcdqvfd lienlthqir ermqdpksvd lqlyhsetle lmlqrwskle
      721 rdfrqksgry diskipdiyd cvkydvqhng slglegtael lrlskaladv vipqeygisr
      781 eekleiavgf clpllrkill dlqrthedes vnklhplysr gvlspgrhvr trlyftsesh
      841 vhsllsvfry gglldetkdt qwqralayls aipelnymtq ivimlyednt rdplseerfh
      901 velhfspgvk gveeegsapt gcgfrpasse neerkadqgs vedlcpgnas depdralqts
      961 plpsegpglp kksplirnrk agsmevlset sssrpggyrl fsssrpptem kqsglgsqct
     1021 glfsttvlgg sssapnlqdy arsqgkklpp aslkhrdell fvpavkrfsv sfakhptnel
     1081 lddqhpvvrl lrsfssdctg grpvsldatl ahhlhqcsyh lrlfrnwlrs gqddpeclyg
     1141 fegcsmvpti ypletlhnal slrqvsefls rvcqrhteaq aqasaalfds mhsnqasdsp
     1201 fspprtlhsp tlqlqqrsek ppwyssgpss tvssagpssp tavdgncpfg fsdqpslssh
     1261 mtegyqdlrl lqeapgsgaq epplegqqep feqnqspqep pvetnqpcqe vaeeisqpcq
     1321 eapdssqpcq dipeevsqpc qqlsdirqlc eenrddvnqt cqevpqisqp cqdasqlyqk
     1381 vskeacelcq enseevnqpc qrvpvetgrl vhgfpvgvdg paqevlgeag kptqeipeel
     1441 sqscqefsvd igrltqgasa inllsqdtpe vdnpplefpg evalqaqevs ewvnqqqsyv
     1501 vpeligqlsg edvpqvqcpp snanpqsqsl apdqnaplpp atcessfsh
//
LOCUS       XP_061015246             416 aa            linear   MAM 02-DEC-2023
DEFINITION  creatine kinase U-type, mitochondrial [Dama dama].
ACCESSION   XP_061015246
VERSION     XP_061015246.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159263.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..416
                     /product="creatine kinase U-type, mitochondrial"
                     /calculated_mol_wt=46782
     Region          49..406
                     /region_name="creatine_kinase_like"
                     /note="Phosphagen (guanidino) kinases such as creatine
                     kinase and similar enzymes; cd00716"
                     /db_xref="CDD:153076"
     Site            order(105,234,265,316,318)
                     /site_type="other"
                     /note="creatine binding site [chemical binding]"
                     /db_xref="CDD:153076"
     Site            order(161,163,165,224,261,269,325,327..329,353,355,
                     357..358,368)
                     /site_type="other"
                     /note="ADP binding site [chemical binding]"
                     /db_xref="CDD:153076"
     Site            order(350..359,362..371)
                     /site_type="active"
                     /note="substrate specificity loop [active]"
                     /db_xref="CDD:153076"
     CDS             1..416
                     /gene="CKMT1A"
                     /coded_by="XM_061159263.1:353..1603"
                     /db_xref="GeneID:133068160"
ORIGIN      
        1 magpfsrlls arpglrllal agagslaagf llrsepvraa serrrlypps aeypdlrkhn
       61 ncmashltpa vyarlcdktt ptgwtldqci qtgvdnpghp fiktvgmvag deetyevfae
      121 lfdpviqerh ngydprtmkh ttdldaskir sgyfderyvl ssrvrtgrsi rglslppact
      181 raerreverv vvdalsglkg dlagryyrls emteaeqqql iddhflfdkp vsplltaagm
      241 ardwpdargi whnneksfli wvneedhtrv ismekggnmk kvferfcrgl keverliqer
      301 gwefmwnerl gyiltcpsnl gtglragvhi klpllskdsr fpkilenlrl qkrgtggvdt
      361 aatgsvfdis nldrlgksev elvqlvidgv nylidcerrl ergqdiripp plpnkh
//
LOCUS       XP_061015247             416 aa            linear   MAM 02-DEC-2023
DEFINITION  creatine kinase U-type, mitochondrial [Dama dama].
ACCESSION   XP_061015247
VERSION     XP_061015247.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159264.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..416
                     /product="creatine kinase U-type, mitochondrial"
                     /calculated_mol_wt=46782
     Region          49..406
                     /region_name="creatine_kinase_like"
                     /note="Phosphagen (guanidino) kinases such as creatine
                     kinase and similar enzymes; cd00716"
                     /db_xref="CDD:153076"
     Site            order(105,234,265,316,318)
                     /site_type="other"
                     /note="creatine binding site [chemical binding]"
                     /db_xref="CDD:153076"
     Site            order(161,163,165,224,261,269,325,327..329,353,355,
                     357..358,368)
                     /site_type="other"
                     /note="ADP binding site [chemical binding]"
                     /db_xref="CDD:153076"
     Site            order(350..359,362..371)
                     /site_type="active"
                     /note="substrate specificity loop [active]"
                     /db_xref="CDD:153076"
     CDS             1..416
                     /gene="CKMT1A"
                     /coded_by="XM_061159264.1:320..1570"
                     /db_xref="GeneID:133068160"
ORIGIN      
        1 magpfsrlls arpglrllal agagslaagf llrsepvraa serrrlypps aeypdlrkhn
       61 ncmashltpa vyarlcdktt ptgwtldqci qtgvdnpghp fiktvgmvag deetyevfae
      121 lfdpviqerh ngydprtmkh ttdldaskir sgyfderyvl ssrvrtgrsi rglslppact
      181 raerreverv vvdalsglkg dlagryyrls emteaeqqql iddhflfdkp vsplltaagm
      241 ardwpdargi whnneksfli wvneedhtrv ismekggnmk kvferfcrgl keverliqer
      301 gwefmwnerl gyiltcpsnl gtglragvhi klpllskdsr fpkilenlrl qkrgtggvdt
      361 aatgsvfdis nldrlgksev elvqlvidgv nylidcerrl ergqdiripp plpnkh
//
LOCUS       XP_061015248             416 aa            linear   MAM 02-DEC-2023
DEFINITION  creatine kinase U-type, mitochondrial [Dama dama].
ACCESSION   XP_061015248
VERSION     XP_061015248.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159265.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..416
                     /product="creatine kinase U-type, mitochondrial"
                     /calculated_mol_wt=46782
     Region          49..406
                     /region_name="creatine_kinase_like"
                     /note="Phosphagen (guanidino) kinases such as creatine
                     kinase and similar enzymes; cd00716"
                     /db_xref="CDD:153076"
     Site            order(105,234,265,316,318)
                     /site_type="other"
                     /note="creatine binding site [chemical binding]"
                     /db_xref="CDD:153076"
     Site            order(161,163,165,224,261,269,325,327..329,353,355,
                     357..358,368)
                     /site_type="other"
                     /note="ADP binding site [chemical binding]"
                     /db_xref="CDD:153076"
     Site            order(350..359,362..371)
                     /site_type="active"
                     /note="substrate specificity loop [active]"
                     /db_xref="CDD:153076"
     CDS             1..416
                     /gene="CKMT1A"
                     /coded_by="XM_061159265.1:358..1608"
                     /db_xref="GeneID:133068160"
ORIGIN      
        1 magpfsrlls arpglrllal agagslaagf llrsepvraa serrrlypps aeypdlrkhn
       61 ncmashltpa vyarlcdktt ptgwtldqci qtgvdnpghp fiktvgmvag deetyevfae
      121 lfdpviqerh ngydprtmkh ttdldaskir sgyfderyvl ssrvrtgrsi rglslppact
      181 raerreverv vvdalsglkg dlagryyrls emteaeqqql iddhflfdkp vsplltaagm
      241 ardwpdargi whnneksfli wvneedhtrv ismekggnmk kvferfcrgl keverliqer
      301 gwefmwnerl gyiltcpsnl gtglragvhi klpllskdsr fpkilenlrl qkrgtggvdt
      361 aatgsvfdis nldrlgksev elvqlvidgv nylidcerrl ergqdiripp plpnkh
//
LOCUS       XP_061015249             416 aa            linear   MAM 02-DEC-2023
DEFINITION  creatine kinase U-type, mitochondrial [Dama dama].
ACCESSION   XP_061015249
VERSION     XP_061015249.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159266.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..416
                     /product="creatine kinase U-type, mitochondrial"
                     /calculated_mol_wt=46782
     Region          49..406
                     /region_name="creatine_kinase_like"
                     /note="Phosphagen (guanidino) kinases such as creatine
                     kinase and similar enzymes; cd00716"
                     /db_xref="CDD:153076"
     Site            order(105,234,265,316,318)
                     /site_type="other"
                     /note="creatine binding site [chemical binding]"
                     /db_xref="CDD:153076"
     Site            order(161,163,165,224,261,269,325,327..329,353,355,
                     357..358,368)
                     /site_type="other"
                     /note="ADP binding site [chemical binding]"
                     /db_xref="CDD:153076"
     Site            order(350..359,362..371)
                     /site_type="active"
                     /note="substrate specificity loop [active]"
                     /db_xref="CDD:153076"
     CDS             1..416
                     /gene="CKMT1A"
                     /coded_by="XM_061159266.1:478..1728"
                     /db_xref="GeneID:133068160"
ORIGIN      
        1 magpfsrlls arpglrllal agagslaagf llrsepvraa serrrlypps aeypdlrkhn
       61 ncmashltpa vyarlcdktt ptgwtldqci qtgvdnpghp fiktvgmvag deetyevfae
      121 lfdpviqerh ngydprtmkh ttdldaskir sgyfderyvl ssrvrtgrsi rglslppact
      181 raerreverv vvdalsglkg dlagryyrls emteaeqqql iddhflfdkp vsplltaagm
      241 ardwpdargi whnneksfli wvneedhtrv ismekggnmk kvferfcrgl keverliqer
      301 gwefmwnerl gyiltcpsnl gtglragvhi klpllskdsr fpkilenlrl qkrgtggvdt
      361 aatgsvfdis nldrlgksev elvqlvidgv nylidcerrl ergqdiripp plpnkh
//
LOCUS       XP_061015250             416 aa            linear   MAM 02-DEC-2023
DEFINITION  creatine kinase U-type, mitochondrial [Dama dama].
ACCESSION   XP_061015250
VERSION     XP_061015250.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159267.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..416
                     /product="creatine kinase U-type, mitochondrial"
                     /calculated_mol_wt=46782
     Region          49..406
                     /region_name="creatine_kinase_like"
                     /note="Phosphagen (guanidino) kinases such as creatine
                     kinase and similar enzymes; cd00716"
                     /db_xref="CDD:153076"
     Site            order(105,234,265,316,318)
                     /site_type="other"
                     /note="creatine binding site [chemical binding]"
                     /db_xref="CDD:153076"
     Site            order(161,163,165,224,261,269,325,327..329,353,355,
                     357..358,368)
                     /site_type="other"
                     /note="ADP binding site [chemical binding]"
                     /db_xref="CDD:153076"
     Site            order(350..359,362..371)
                     /site_type="active"
                     /note="substrate specificity loop [active]"
                     /db_xref="CDD:153076"
     CDS             1..416
                     /gene="CKMT1A"
                     /coded_by="XM_061159267.1:279..1529"
                     /db_xref="GeneID:133068160"
ORIGIN      
        1 magpfsrlls arpglrllal agagslaagf llrsepvraa serrrlypps aeypdlrkhn
       61 ncmashltpa vyarlcdktt ptgwtldqci qtgvdnpghp fiktvgmvag deetyevfae
      121 lfdpviqerh ngydprtmkh ttdldaskir sgyfderyvl ssrvrtgrsi rglslppact
      181 raerreverv vvdalsglkg dlagryyrls emteaeqqql iddhflfdkp vsplltaagm
      241 ardwpdargi whnneksfli wvneedhtrv ismekggnmk kvferfcrgl keverliqer
      301 gwefmwnerl gyiltcpsnl gtglragvhi klpllskdsr fpkilenlrl qkrgtggvdt
      361 aatgsvfdis nldrlgksev elvqlvidgv nylidcerrl ergqdiripp plpnkh
//
LOCUS       XP_061015251             528 aa            linear   MAM 02-DEC-2023
DEFINITION  cation channel sperm-associated protein 2 [Dama dama].
ACCESSION   XP_061015251
VERSION     XP_061015251.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159268.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..528
                     /product="cation channel sperm-associated protein 2"
                     /calculated_mol_wt=61541
     Region          107..350
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     CDS             1..528
                     /gene="CATSPER2"
                     /coded_by="XM_061159268.1:70..1656"
                     /db_xref="GeneID:133068162"
ORIGIN      
        1 matyhpsghm qlpradairs rlidtfslie hlqglsqavp rhtireilds srlkslmlgd
       61 qhqlvrfsik prhveritha qrlmstlrvr cskrpplslw agwvlerpif rnfiiflifl
      121 ntivlmveie llesantrle tlkltlevaa wfillvfile illmwlssff lfwknawnvf
      181 dfvvtvlslm peivvlagvt sqpvwlqllr icrvlrslkl farfhqvrvi ilalvralks
      241 mtfllmllli ffyifavagv yffenytrsp rrdleyhecf sdllnsivtv filftldhwy
      301 allqdtwkvp evsrafssiy vilwlllgsi ifrniivamm vtnfqnirne lneemthlev
      361 qykadifkrq iiqrrqnlip eaqrssiskl dardasqrer asdlteaskq eskqsatrkg
      421 seasksitks lskrgkstss fssssssssc ssisssrcyd pigqldweth vhqnlpglmd
      481 mdqdervvwp rdslfryfel leelqynlee rkrlqefavq almnfedk
//
LOCUS       XP_061015252             505 aa            linear   MAM 02-DEC-2023
DEFINITION  protein disulfide-isomerase A3 [Dama dama].
ACCESSION   XP_061015252
VERSION     XP_061015252.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159269.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..505
                     /product="protein disulfide-isomerase A3"
                     /calculated_mol_wt=56977
     Region          25..487
                     /region_name="ER_PDI_fam"
                     /note="protein disulfide isomerase, eukaryotic; TIGR01130"
                     /db_xref="CDD:273457"
     CDS             1..505
                     /gene="PDIA3"
                     /coded_by="XM_061159269.1:125..1642"
                     /db_xref="GeneID:133068163"
ORIGIN      
        1 mrlrrlplfp glalllaaar lavasdvlel tddnfesrit dtgssglmlv effapwcghc
       61 kklapeyeaa atrlkgivpl akvdctantn tcnkygvsgy ptlkifrdge esgaydgprt
      121 adgivshlkk qagpasvplk teeefekfin dkdasvvgff kdlfseahse flkaasnlrd
      181 nyrfahtnie slvnkydddg egitlfrpsh ltskfedktv ayteqkmtsg kikrfiqeni
      241 fgicphmted nkdllqnkdl liayydvdye knakgsnywr nrvmmvakkf ldagkklyfa
      301 vasrktfshe lsdfglestt geipvvairt akgekfvmqe efsrdgkale rflqdyfdgn
      361 lkrylksepi pesndgpvkv vvaenfdeiv nnenkdvlie fyapwcghck nlepkykelg
      421 eklrkdpniv iakmdatand vpspyevrgf ptiyfspank kqnpkkyegg relsdfisyl
      481 kreatnppvi qeekpkkkkk aqedl
//
LOCUS       XP_061015253             425 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA polymerase II elongation factor ELL3 isoform X1 [Dama dama].
ACCESSION   XP_061015253
VERSION     XP_061015253.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159270.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..425
                     /product="RNA polymerase II elongation factor ELL3 isoform
                     X1"
                     /calculated_mol_wt=47771
     Region          23..>119
                     /region_name="ELL"
                     /note="RNA polymerase II elongation factor ELL; pfam10390"
                     /db_xref="CDD:463068"
     Region          319..419
                     /region_name="Occludin_ELL"
                     /note="Occludin homology domain; pfam07303"
                     /db_xref="CDD:462140"
     CDS             1..425
                     /gene="ELL3"
                     /coded_by="XM_061159270.1:102..1379"
                     /db_xref="GeneID:133068164"
ORIGIN      
        1 magpqellsg klqlcftpaa rtsllllrln daalralqec hqqqvrpvia fqgnrgylrl
       61 pgphwsclfs fiasqcgqeg aggpgldlvc qrlgrsgpnr lhclgplrer ltiwaamdsi
      121 papssvqrhn rtgdardreg wksvgdypeg dtisrsqmal eevpdplass qgqslpgssr
      181 ehmaqwevrn qtllpnrdpd qalppsasqk hvdksslcgs ncqekgtigg fwltvyvpei
      241 csqqkrpapa amvelkqkrl rtlapsplqg lpsqdlqeed weqedkdedv gprlehspsv
      301 qadsespnpe evpdyllqyr aihsaeqqha yeqdfetdya eyrilharvg aasqrfiela
      361 aemnsvqrgt pehkvleeki iqeykkfrkr ypgyreekrr ceylhqklsh ikglilefee
      421 knrgs
//
LOCUS       XP_061015254             400 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA polymerase II elongation factor ELL3 isoform X2 [Dama dama].
ACCESSION   XP_061015254
VERSION     XP_061015254.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159271.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..400
                     /product="RNA polymerase II elongation factor ELL3 isoform
                     X2"
                     /calculated_mol_wt=45113
     Region          23..>119
                     /region_name="ELL"
                     /note="RNA polymerase II elongation factor ELL; pfam10390"
                     /db_xref="CDD:463068"
     Region          294..394
                     /region_name="Occludin_ELL"
                     /note="Occludin homology domain; pfam07303"
                     /db_xref="CDD:462140"
     CDS             1..400
                     /gene="ELL3"
                     /coded_by="XM_061159271.1:100..1302"
                     /db_xref="GeneID:133068164"
ORIGIN      
        1 magpqellsg klqlcftpaa rtsllllrln daalralqec hqqqvrpvia fqgnrgylrl
       61 pgphwsclfs fiasqcgqeg aggpgldlvc qrlgrsgpnr lhclgplrer ltiwaamdsi
      121 papssvqrhn rtgdardreg wksvgdypeg dtisrsqmal eevpdplass qgqslpgssr
      181 ehmaqwevrn qtllpnrdpd qalppsasqk hvdkicsqqk rpapaamvel kqkrlrtlap
      241 splqglpsqd lqeedweqed kdedvgprle hspsvqadse spnpeevpdy llqyraihsa
      301 eqqhayeqdf etdyaeyril harvgaasqr fielaaemns vqrgtpehkv leekiiqeyk
      361 kfrkrypgyr eekrrceylh qklshikgli lefeeknrgs
//
LOCUS       XP_061015255             395 aa            linear   MAM 02-DEC-2023
DEFINITION  RNA polymerase II elongation factor ELL3 isoform X3 [Dama dama].
ACCESSION   XP_061015255
VERSION     XP_061015255.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159272.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..395
                     /product="RNA polymerase II elongation factor ELL3 isoform
                     X3"
                     /calculated_mol_wt=44553
     Region          23..>119
                     /region_name="ELL"
                     /note="RNA polymerase II elongation factor ELL; pfam10390"
                     /db_xref="CDD:463068"
     Region          289..389
                     /region_name="Occludin_ELL"
                     /note="Occludin homology domain; pfam07303"
                     /db_xref="CDD:462140"
     CDS             1..395
                     /gene="ELL3"
                     /coded_by="XM_061159272.1:96..1283"
                     /db_xref="GeneID:133068164"
ORIGIN      
        1 magpqellsg klqlcftpaa rtsllllrln daalralqec hqqqvrpvia fqgnrgylrl
       61 pgphwsclfs fiasqcgqeg aggpgldlvc qrlgrsgpnr lhclgplrer ltiwaamdsi
      121 papssvqrhn rtgdardreg wksvgdypeg dtisrsqmal eevpdplass qgqslpgssr
      181 ehmaqwevrn qtllpnrdpd qalppsasqk hvdkkrpapa amvelkqkrl rtlapsplqg
      241 lpsqdlqeed weqedkdedv gprlehspsv qadsespnpe evpdyllqyr aihsaeqqha
      301 yeqdfetdya eyrilharvg aasqrfiela aemnsvqrgt pehkvleeki iqeykkfrkr
      361 ypgyreekrr ceylhqklsh ikglilefee knrgs
//
LOCUS       XP_061015256             630 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 76 isoform X1 [Dama dama].
ACCESSION   XP_061015256
VERSION     XP_061015256.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159273.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..630
                     /product="WD repeat-containing protein 76 isoform X1"
                     /calculated_mol_wt=70239
     Region          <321..531
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          323..365
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          371..408
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          413..451
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          459..499
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          558..584
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..630
                     /gene="WDR76"
                     /coded_by="XM_061159273.1:202..2094"
                     /db_xref="GeneID:133068165"
ORIGIN      
        1 msgsraeaeq kggsrqrlqv nvneykenqn iadvslrpvq ttvlgktakv ylvpfslsny
       61 kagqlkrpks lldknsnnev tckkskkaei kkscrriltp kmeatsskee stlqkssldv
      121 haesnkwqsk spsdavvlsa dtessqegds dedttpgldd fselspyerk rlknisenan
      181 ffaslqlses aarlremikk rqppeskrkk pkkkengtgc rrsmrllkvd psgvplpaap
      241 tqtvlegden plippgplem tpenrddddd elfkgflqtw aelsktrskn tekelssiks
      301 ykvklngmvi sedtvckvtr gsitsmaihp semrtlvaag akygqvglwd lthqpkedgv
      361 ylfqphsqpv sclyfspanp ahllslsydg tlrcgdfsra vfeevyrder ssfssfdflt
      421 edastlivgh wdgsmslvdr rtpgtscekl lksslskirt vhvhpvhrqy fitaglrdih
      481 iydarclnrs rnqplislte htksiasayf spltgnrvvt tcadcklrif dsscisskip
      541 littirhnti tgrwltrfqa vwdpkqedcv ivgsmahprr veifhetgkw vhsflggecl
      601 asvcsinamh ptryilaggn ssgrvhvfmn
//
LOCUS       XP_061015257             630 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 76 isoform X1 [Dama dama].
ACCESSION   XP_061015257
VERSION     XP_061015257.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159274.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..630
                     /product="WD repeat-containing protein 76 isoform X1"
                     /calculated_mol_wt=70239
     Region          <321..531
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          323..365
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          371..408
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          413..451
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          459..499
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          558..584
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..630
                     /gene="WDR76"
                     /coded_by="XM_061159274.1:234..2126"
                     /db_xref="GeneID:133068165"
ORIGIN      
        1 msgsraeaeq kggsrqrlqv nvneykenqn iadvslrpvq ttvlgktakv ylvpfslsny
       61 kagqlkrpks lldknsnnev tckkskkaei kkscrriltp kmeatsskee stlqkssldv
      121 haesnkwqsk spsdavvlsa dtessqegds dedttpgldd fselspyerk rlknisenan
      181 ffaslqlses aarlremikk rqppeskrkk pkkkengtgc rrsmrllkvd psgvplpaap
      241 tqtvlegden plippgplem tpenrddddd elfkgflqtw aelsktrskn tekelssiks
      301 ykvklngmvi sedtvckvtr gsitsmaihp semrtlvaag akygqvglwd lthqpkedgv
      361 ylfqphsqpv sclyfspanp ahllslsydg tlrcgdfsra vfeevyrder ssfssfdflt
      421 edastlivgh wdgsmslvdr rtpgtscekl lksslskirt vhvhpvhrqy fitaglrdih
      481 iydarclnrs rnqplislte htksiasayf spltgnrvvt tcadcklrif dsscisskip
      541 littirhnti tgrwltrfqa vwdpkqedcv ivgsmahprr veifhetgkw vhsflggecl
      601 asvcsinamh ptryilaggn ssgrvhvfmn
//
LOCUS       XP_061015258             630 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 76 isoform X1 [Dama dama].
ACCESSION   XP_061015258
VERSION     XP_061015258.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159275.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..630
                     /product="WD repeat-containing protein 76 isoform X1"
                     /calculated_mol_wt=70239
     Region          <321..531
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          323..365
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          371..408
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          413..451
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          459..499
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          558..584
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..630
                     /gene="WDR76"
                     /coded_by="XM_061159275.1:190..2082"
                     /db_xref="GeneID:133068165"
ORIGIN      
        1 msgsraeaeq kggsrqrlqv nvneykenqn iadvslrpvq ttvlgktakv ylvpfslsny
       61 kagqlkrpks lldknsnnev tckkskkaei kkscrriltp kmeatsskee stlqkssldv
      121 haesnkwqsk spsdavvlsa dtessqegds dedttpgldd fselspyerk rlknisenan
      181 ffaslqlses aarlremikk rqppeskrkk pkkkengtgc rrsmrllkvd psgvplpaap
      241 tqtvlegden plippgplem tpenrddddd elfkgflqtw aelsktrskn tekelssiks
      301 ykvklngmvi sedtvckvtr gsitsmaihp semrtlvaag akygqvglwd lthqpkedgv
      361 ylfqphsqpv sclyfspanp ahllslsydg tlrcgdfsra vfeevyrder ssfssfdflt
      421 edastlivgh wdgsmslvdr rtpgtscekl lksslskirt vhvhpvhrqy fitaglrdih
      481 iydarclnrs rnqplislte htksiasayf spltgnrvvt tcadcklrif dsscisskip
      541 littirhnti tgrwltrfqa vwdpkqedcv ivgsmahprr veifhetgkw vhsflggecl
      601 asvcsinamh ptryilaggn ssgrvhvfmn
//
LOCUS       XP_061015259             628 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 76 isoform X2 [Dama dama].
ACCESSION   XP_061015259
VERSION     XP_061015259.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159276.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..628
                     /product="WD repeat-containing protein 76 isoform X2"
                     /calculated_mol_wt=70026
     Region          <319..529
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          321..363
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          369..406
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          411..449
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          457..497
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          556..582
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..628
                     /gene="WDR76"
                     /coded_by="XM_061159276.1:202..2088"
                     /db_xref="GeneID:133068165"
ORIGIN      
        1 msgsraeaeq kggsrqrlqv neykenqnia dvslrpvqtt vlgktakvyl vpfslsnyka
       61 gqlkrpksll dknsnnevtc kkskkaeikk scrriltpkm eatsskeest lqkssldvha
      121 esnkwqsksp sdavvlsadt essqegdsde dttpglddfs elspyerkrl knisenanff
      181 aslqlsesaa rlremikkrq ppeskrkkpk kkengtgcrr smrllkvdps gvplpaaptq
      241 tvlegdenpl ippgplemtp enrdddddel fkgflqtwae lsktrsknte kelssiksyk
      301 vklngmvise dtvckvtrgs itsmaihpse mrtlvaagak ygqvglwdlt hqpkedgvyl
      361 fqphsqpvsc lyfspanpah llslsydgtl rcgdfsravf eevyrderss fssfdflted
      421 astlivghwd gsmslvdrrt pgtscekllk sslskirtvh vhpvhrqyfi taglrdihiy
      481 darclnrsrn qplislteht ksiasayfsp ltgnrvvttc adcklrifds scisskipli
      541 ttirhntitg rwltrfqavw dpkqedcviv gsmahprrve ifhetgkwvh sflggeclas
      601 vcsinamhpt ryilaggnss grvhvfmn
//
LOCUS       XP_061015260             529 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 76 isoform X3 [Dama dama].
ACCESSION   XP_061015260
VERSION     XP_061015260.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159277.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..529
                     /product="WD repeat-containing protein 76 isoform X3"
                     /calculated_mol_wt=58935
     Region          <220..430
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          222..264
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          270..307
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          312..350
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          358..398
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          457..483
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..529
                     /gene="WDR76"
                     /coded_by="XM_061159277.1:398..1987"
                     /db_xref="GeneID:133068165"
ORIGIN      
        1 meatsskees tlqkssldvh aesnkwqsks psdavvlsad tessqegdsd edttpglddf
       61 selspyerkr lknisenanf faslqlsesa arlremikkr qppeskrkkp kkkengtgcr
      121 rsmrllkvdp sgvplpaapt qtvlegdenp lippgplemt penrddddde lfkgflqtwa
      181 elsktrsknt ekelssiksy kvklngmvis edtvckvtrg sitsmaihps emrtlvaaga
      241 kygqvglwdl thqpkedgvy lfqphsqpvs clyfspanpa hllslsydgt lrcgdfsrav
      301 feevyrders sfssfdflte dastlivghw dgsmslvdrr tpgtscekll ksslskirtv
      361 hvhpvhrqyf itaglrdihi ydarclnrsr nqplislteh tksiasayfs pltgnrvvtt
      421 cadcklrifd sscisskipl ittirhntit grwltrfqav wdpkqedcvi vgsmahprrv
      481 eifhetgkwv hsflggecla svcsinamhp tryilaggns sgrvhvfmn
//
LOCUS       XP_061015261             529 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 76 isoform X3 [Dama dama].
ACCESSION   XP_061015261
VERSION     XP_061015261.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159278.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..529
                     /product="WD repeat-containing protein 76 isoform X3"
                     /calculated_mol_wt=58935
     Region          <220..430
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          222..264
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          270..307
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          312..350
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          358..398
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          457..483
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..529
                     /gene="WDR76"
                     /coded_by="XM_061159278.1:436..2025"
                     /db_xref="GeneID:133068165"
ORIGIN      
        1 meatsskees tlqkssldvh aesnkwqsks psdavvlsad tessqegdsd edttpglddf
       61 selspyerkr lknisenanf faslqlsesa arlremikkr qppeskrkkp kkkengtgcr
      121 rsmrllkvdp sgvplpaapt qtvlegdenp lippgplemt penrddddde lfkgflqtwa
      181 elsktrsknt ekelssiksy kvklngmvis edtvckvtrg sitsmaihps emrtlvaaga
      241 kygqvglwdl thqpkedgvy lfqphsqpvs clyfspanpa hllslsydgt lrcgdfsrav
      301 feevyrders sfssfdflte dastlivghw dgsmslvdrr tpgtscekll ksslskirtv
      361 hvhpvhrqyf itaglrdihi ydarclnrsr nqplislteh tksiasayfs pltgnrvvtt
      421 cadcklrifd sscisskipl ittirhntit grwltrfqav wdpkqedcvi vgsmahprrv
      481 eifhetgkwv hsflggecla svcsinamhp tryilaggns sgrvhvfmn
//
LOCUS       XP_061015262             529 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 76 isoform X3 [Dama dama].
ACCESSION   XP_061015262
VERSION     XP_061015262.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159279.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..529
                     /product="WD repeat-containing protein 76 isoform X3"
                     /calculated_mol_wt=58935
     Region          <220..430
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          222..264
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          270..307
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          312..350
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          358..398
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          457..483
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..529
                     /gene="WDR76"
                     /coded_by="XM_061159279.1:371..1960"
                     /db_xref="GeneID:133068165"
ORIGIN      
        1 meatsskees tlqkssldvh aesnkwqsks psdavvlsad tessqegdsd edttpglddf
       61 selspyerkr lknisenanf faslqlsesa arlremikkr qppeskrkkp kkkengtgcr
      121 rsmrllkvdp sgvplpaapt qtvlegdenp lippgplemt penrddddde lfkgflqtwa
      181 elsktrsknt ekelssiksy kvklngmvis edtvckvtrg sitsmaihps emrtlvaaga
      241 kygqvglwdl thqpkedgvy lfqphsqpvs clyfspanpa hllslsydgt lrcgdfsrav
      301 feevyrders sfssfdflte dastlivghw dgsmslvdrr tpgtscekll ksslskirtv
      361 hvhpvhrqyf itaglrdihi ydarclnrsr nqplislteh tksiasayfs pltgnrvvtt
      421 cadcklrifd sscisskipl ittirhntit grwltrfqav wdpkqedcvi vgsmahprrv
      481 eifhetgkwv hsflggecla svcsinamhp tryilaggns sgrvhvfmn
//
LOCUS       XP_061015263             529 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 76 isoform X3 [Dama dama].
ACCESSION   XP_061015263
VERSION     XP_061015263.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159280.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..529
                     /product="WD repeat-containing protein 76 isoform X3"
                     /calculated_mol_wt=58935
     Region          <220..430
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          222..264
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          270..307
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          312..350
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          358..398
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          457..483
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..529
                     /gene="WDR76"
                     /coded_by="XM_061159280.1:390..1979"
                     /db_xref="GeneID:133068165"
ORIGIN      
        1 meatsskees tlqkssldvh aesnkwqsks psdavvlsad tessqegdsd edttpglddf
       61 selspyerkr lknisenanf faslqlsesa arlremikkr qppeskrkkp kkkengtgcr
      121 rsmrllkvdp sgvplpaapt qtvlegdenp lippgplemt penrddddde lfkgflqtwa
      181 elsktrsknt ekelssiksy kvklngmvis edtvckvtrg sitsmaihps emrtlvaaga
      241 kygqvglwdl thqpkedgvy lfqphsqpvs clyfspanpa hllslsydgt lrcgdfsrav
      301 feevyrders sfssfdflte dastlivghw dgsmslvdrr tpgtscekll ksslskirtv
      361 hvhpvhrqyf itaglrdihi ydarclnrsr nqplislteh tksiasayfs pltgnrvvtt
      421 cadcklrifd sscisskipl ittirhntit grwltrfqav wdpkqedcvi vgsmahprrv
      481 eifhetgkwv hsflggecla svcsinamhp tryilaggns sgrvhvfmn
//
LOCUS       XP_061015264             529 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 76 isoform X3 [Dama dama].
ACCESSION   XP_061015264
VERSION     XP_061015264.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159281.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..529
                     /product="WD repeat-containing protein 76 isoform X3"
                     /calculated_mol_wt=58935
     Region          <220..430
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          222..264
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          270..307
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          312..350
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          358..398
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          457..483
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..529
                     /gene="WDR76"
                     /coded_by="XM_061159281.1:492..2081"
                     /db_xref="GeneID:133068165"
ORIGIN      
        1 meatsskees tlqkssldvh aesnkwqsks psdavvlsad tessqegdsd edttpglddf
       61 selspyerkr lknisenanf faslqlsesa arlremikkr qppeskrkkp kkkengtgcr
      121 rsmrllkvdp sgvplpaapt qtvlegdenp lippgplemt penrddddde lfkgflqtwa
      181 elsktrsknt ekelssiksy kvklngmvis edtvckvtrg sitsmaihps emrtlvaaga
      241 kygqvglwdl thqpkedgvy lfqphsqpvs clyfspanpa hllslsydgt lrcgdfsrav
      301 feevyrders sfssfdflte dastlivghw dgsmslvdrr tpgtscekll ksslskirtv
      361 hvhpvhrqyf itaglrdihi ydarclnrsr nqplislteh tksiasayfs pltgnrvvtt
      421 cadcklrifd sscisskipl ittirhntit grwltrfqav wdpkqedcvi vgsmahprrv
      481 eifhetgkwv hsflggecla svcsinamhp tryilaggns sgrvhvfmn
//
LOCUS       XP_061015265             439 aa            linear   MAM 02-DEC-2023
DEFINITION  microfibrillar-associated protein 1 [Dama dama].
ACCESSION   XP_061015265
VERSION     XP_061015265.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159282.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..439
                     /product="microfibrillar-associated protein 1"
                     /calculated_mol_wt=51846
     Region          190..399
                     /region_name="MFAP1"
                     /note="Microfibril-associated/Pre-mRNA processing;
                     pfam06991"
                     /db_xref="CDD:462060"
     CDS             1..439
                     /gene="MFAP1"
                     /coded_by="XM_061159282.1:153..1472"
                     /db_xref="GeneID:133068167"
ORIGIN      
        1 msvpsslmkq ppiqstagav pvrnekgeis mekvkvkryv sgkrpdyapm essdeedeef
       61 qfikkakeqe aepeeqeeds ssdprlrrlq nrisedveer larhrkivep evvgesdsev
      121 egdpwrmere dsseeeeeei deeeierrrg mmrqraqerk neelevmeve degrsgeese
      181 seseyeeytd sedemeprlk pvfirkkdrv tvqereaeal kqkeleqeak hmaeerrkyt
      241 lkiveeetkk eleenkrsla aldalntdde ndeeeyeawk vrelkrikrd redrealeke
      301 kaeiermrnl teeerraelr angkvitnka vkgkykflqk yyhrgaffmd edeevykrdf
      361 saptledhfn ktilpkvmqv knfgrsgrtk ythlvdqdtt sfdsawgqes aqntkffkqk
      421 aagvrdvfer psakkrktt
//
LOCUS       XP_061015266             121 aa            linear   MAM 02-DEC-2023
DEFINITION  huntingtin-interacting protein K [Dama dama].
ACCESSION   XP_061015266
VERSION     XP_061015266.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159283.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..121
                     /product="huntingtin-interacting protein K"
                     /calculated_mol_wt=13520
     Region          80..120
                     /region_name="HYPK_UBA"
                     /note="HYPK UBA domain; pfam19026"
                     /db_xref="CDD:436907"
     CDS             1..121
                     /gene="HYPK"
                     /coded_by="XM_061159283.1:137..502"
                     /db_xref="GeneID:133068168"
ORIGIN      
        1 mategdvele letetsgper ppekprkhds gaadlervtd yaeekeiqss nletamsvig
       61 drrsreqkak qerekelakv tikkedleli mtemeisraa aerslrehmg nvvealialt
      121 n
//
LOCUS       XP_061015267              59 aa            linear   MAM 02-DEC-2023
DEFINITION  small EDRK-rich factor 2 [Dama dama].
ACCESSION   XP_061015267
VERSION     XP_061015267.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159284.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..59
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..59
                     /product="small EDRK-rich factor 2"
                     /calculated_mol_wt=6769
     CDS             1..59
                     /gene="SERF2"
                     /coded_by="XM_061159284.1:127..306"
                     /db_xref="GeneID:133068169"
ORIGIN      
        1 mtrgnqrela rqknmkkqsd svkgkrrddg lsaaarkqrd seimqqkqkk anekkeepk
//
LOCUS       XP_061015268             569 aa            linear   MAM 02-DEC-2023
DEFINITION  FERM domain-containing protein 5 isoform X1 [Dama dama].
ACCESSION   XP_061015268
VERSION     XP_061015268.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159285.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..569
                     /product="FERM domain-containing protein 5 isoform X1"
                     /calculated_mol_wt=64897
     Region          19..210
                     /region_name="B41"
                     /note="Band 4.1 homologues; smart00295"
                     /db_xref="CDD:214604"
     Region          191..295
                     /region_name="FERM_C_FRMD3_FRMD5"
                     /note="FERM domain C-lobe of FERM domain-containing
                     protein 3 and 5 (FRMD3 and 5); cd13192"
                     /db_xref="CDD:270013"
     Site            order(214,231,233,239)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270013"
     Site            order(243,248..251,284,288,291..292)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270013"
     Site            284..295
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:270013"
     Region          309..354
                     /region_name="FA"
                     /note="FERM adjacent (FA); pfam08736"
                     /db_xref="CDD:462582"
     CDS             1..569
                     /gene="FRMD5"
                     /coded_by="XM_061159285.1:81..1790"
                     /db_xref="GeneID:133068170"
ORIGIN      
        1 mlsrlmsgss rslereysct vrllddseyt ctiqrdakgq ylfdllchhl nllekdyfgi
       61 rfvdpdkqrh wleftksvvk qlrsqppftm cfrvkfypad pvalkeeitr ylvflqikrd
      121 lyhgrllckt sdaallaayi lqaeigdydp gkhpegyssk fqffpkhsek lerkiaeihk
      181 telsgqtpat selnflrkaq tletygvdph pckdvsgnaa flaftpfgfv vlqgnkrvhf
      241 ikwnevtklk fegktfylyv sqkeekkiil tyfaptpeac khlwkcgien qafyklekss
      301 qvrtvsssnl ffkgsrfrys grvakevmes sakikreppe ihragmvpsr scpsithgpr
      361 lssvprtrrr avhisimegl eslrdsahst pvrasshgdt flphvrssra dsnervavia
      421 deayspadsv lptpvaehsl elmllsrqin gatcieeeke seastptaae lealggelra
      481 lcqgrgrpee eqvnkfvlsv lrlllvtmgl lfvlllllii ltesdldiaf frdirqtpef
      541 eqfhyqyfcp lrrwfackir svvsllidt
//
LOCUS       XP_061015269             534 aa            linear   MAM 02-DEC-2023
DEFINITION  FERM domain-containing protein 5 isoform X2 [Dama dama].
ACCESSION   XP_061015269
VERSION     XP_061015269.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159286.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..534
                     /product="FERM domain-containing protein 5 isoform X2"
                     /calculated_mol_wt=60773
     Region          19..210
                     /region_name="B41"
                     /note="Band 4.1 homologues; smart00295"
                     /db_xref="CDD:214604"
     Region          191..295
                     /region_name="FERM_C_FRMD3_FRMD5"
                     /note="FERM domain C-lobe of FERM domain-containing
                     protein 3 and 5 (FRMD3 and 5); cd13192"
                     /db_xref="CDD:270013"
     Site            order(214,231,233,239)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270013"
     Site            order(243,248..251,284,288,291..292)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270013"
     Site            284..295
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:270013"
     Region          309..354
                     /region_name="FA"
                     /note="FERM adjacent (FA); pfam08736"
                     /db_xref="CDD:462582"
     CDS             1..534
                     /gene="FRMD5"
                     /coded_by="XM_061159286.1:81..1685"
                     /db_xref="GeneID:133068170"
ORIGIN      
        1 mlsrlmsgss rslereysct vrllddseyt ctiqrdakgq ylfdllchhl nllekdyfgi
       61 rfvdpdkqrh wleftksvvk qlrsqppftm cfrvkfypad pvalkeeitr ylvflqikrd
      121 lyhgrllckt sdaallaayi lqaeigdydp gkhpegyssk fqffpkhsek lerkiaeihk
      181 telsgqtpat selnflrkaq tletygvdph pckdvsgnaa flaftpfgfv vlqgnkrvhf
      241 ikwnevtklk fegktfylyv sqkeekkiil tyfaptpeac khlwkcgien qafyklekss
      301 qvrtvsssnl ffkgsrfrys grvakevmes sakikreppe ihragmvpsr scpsithgpr
      361 lssvprtrrr avhisimegl eslrdsahst pvrasshgdt flphvrssra dsnervavia
      421 deayspadsv lptpvaehsl elmllsrqin gatcieeeke seastptaae lealggelra
      481 lcqgrgrpee eqsghlkgpp rkqqqqqgwv rkiepdelkd arkklilrmk sfrk
//
LOCUS       XP_061015270             507 aa            linear   MAM 02-DEC-2023
DEFINITION  FERM domain-containing protein 5 isoform X3 [Dama dama].
ACCESSION   XP_061015270
VERSION     XP_061015270.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159287.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..507
                     /product="FERM domain-containing protein 5 isoform X3"
                     /calculated_mol_wt=57299
     Region          19..210
                     /region_name="B41"
                     /note="Band 4.1 homologues; smart00295"
                     /db_xref="CDD:214604"
     Region          191..295
                     /region_name="FERM_C_FRMD3_FRMD5"
                     /note="FERM domain C-lobe of FERM domain-containing
                     protein 3 and 5 (FRMD3 and 5); cd13192"
                     /db_xref="CDD:270013"
     Site            order(214,231,233,239)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270013"
     Site            order(243,248..251,284,288,291..292)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270013"
     Site            284..295
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:270013"
     Region          309..354
                     /region_name="FA"
                     /note="FERM adjacent (FA); pfam08736"
                     /db_xref="CDD:462582"
     CDS             1..507
                     /gene="FRMD5"
                     /coded_by="XM_061159287.1:81..1604"
                     /db_xref="GeneID:133068170"
ORIGIN      
        1 mlsrlmsgss rslereysct vrllddseyt ctiqrdakgq ylfdllchhl nllekdyfgi
       61 rfvdpdkqrh wleftksvvk qlrsqppftm cfrvkfypad pvalkeeitr ylvflqikrd
      121 lyhgrllckt sdaallaayi lqaeigdydp gkhpegyssk fqffpkhsek lerkiaeihk
      181 telsgqtpat selnflrkaq tletygvdph pckdvsgnaa flaftpfgfv vlqgnkrvhf
      241 ikwnevtklk fegktfylyv sqkeekkiil tyfaptpeac khlwkcgien qafyklekss
      301 qvrtvsssnl ffkgsrfrys grvakevmes sakikreppe ihragmvpsr scpsithgpr
      361 lssvprtrrr avhisimegl eslrdsahst pvrasshgdt flphvrssra dsnervavia
      421 deayspadsv lptpvaehsl elmllsrqin gatcieeeke seastptaae lealggelra
      481 lcqgrgrpee eqamvclqnp lsgepah
//
LOCUS       XP_061015271             480 aa            linear   MAM 02-DEC-2023
DEFINITION  FERM domain-containing protein 5 isoform X4 [Dama dama].
ACCESSION   XP_061015271
VERSION     XP_061015271.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159288.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..480
                     /product="FERM domain-containing protein 5 isoform X4"
                     /calculated_mol_wt=54326
     Region          11..121
                     /region_name="FERM_M"
                     /note="FERM central domain; pfam00373"
                     /db_xref="CDD:459788"
     Region          102..206
                     /region_name="FERM_C_FRMD3_FRMD5"
                     /note="FERM domain C-lobe of FERM domain-containing
                     protein 3 and 5 (FRMD3 and 5); cd13192"
                     /db_xref="CDD:270013"
     Site            order(125,142,144,150)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270013"
     Site            order(154,159..162,195,199,202..203)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270013"
     Site            195..206
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:270013"
     Region          220..265
                     /region_name="FA"
                     /note="FERM adjacent (FA); pfam08736"
                     /db_xref="CDD:462582"
     CDS             1..480
                     /gene="FRMD5"
                     /coded_by="XM_061159288.1:2148..3590"
                     /db_xref="GeneID:133068170"
ORIGIN      
        1 mcfrvkfypa dpvalkeeit rylvflqikr dlyhgrllck tsdaallaay ilqaeigdyd
       61 pgkhpegyss kfqffpkhse klerkiaeih ktelsgqtpa tselnflrka qtletygvdp
      121 hpckdvsgna aflaftpfgf vvlqgnkrvh fikwnevtkl kfegktfyly vsqkeekkii
      181 ltyfaptpea ckhlwkcgie nqafykleks sqvrtvsssn lffkgsrfry sgrvakevme
      241 ssakikrepp eihragmvps rscpsithgp rlssvprtrr ravhisimeg leslrdsahs
      301 tpvrasshgd tflphvrssr adsnervavi adeayspads vlptpvaehs lelmllsrqi
      361 ngatcieeek eseastptaa elealggelr alcqgrgrpe eeqvnkfvls vlrlllvtmg
      421 llfvllllli iltesdldia ffrdirqtpe feqfhyqyfc plrrwfacki rsvvsllidt
//
LOCUS       XP_061015272             395 aa            linear   MAM 02-DEC-2023
DEFINITION  ovarian cancer G-protein coupled receptor 1 isoform X1 [Dama dama].
ACCESSION   XP_061015272
VERSION     XP_061015272.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159289.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..395
                     /product="ovarian cancer G-protein coupled receptor 1
                     isoform X1"
                     /calculated_mol_wt=44226
     Region          32..307
                     /region_name="7tmA_GPR68_OGR1"
                     /note="G protein-coupled receptor 68, member of the class
                     A family of seven-transmembrane G protein-coupled
                     receptors; cd15367"
                     /db_xref="CDD:320489"
     Region          32..59
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320489"
     Region          66..91
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320489"
     Site            order(87,90..91,104..109,111..112,115,160,162..166,192,
                     195..197,199..201,203..204,251,254..255,257..258,261,
                     274..275,277..279,282,285..286)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320489"
     Region          104..134
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320489"
     Region          146..168
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320489"
     Region          192..221
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320489"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320489"
     Region          275..300
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320489"
     CDS             1..395
                     /gene="GPR68"
                     /coded_by="XM_061159289.1:235..1422"
                     /db_xref="GeneID:133068171"
ORIGIN      
        1 mggeapagpk mgnitadnts mncdidhtih qtlapvvyit vlvlgfpanc lslyygylqi
       61 karnelgvyl cnltvadlfy icslpfwlqy vlqhdhwshd dlscqvcgil lyeniyisvg
      121 flccisidry lavahpfrfh qfrtlkaamg vsaliwakel ltsvyflmhe evvedadrhr
      181 vcfehyplep rqrginyyrf lvgflfpicl llasyrgilr avrrshgtqk srkdqiqrlv
      241 lstvviflac flpyhalllv rslwesscdf akgifnayhf sllltsfncv adpvlycfvs
      301 etthrdlarl cgaclafltc artgrarety plgapeasgk sedpegaccd crvqqgcwps
      361 vgmsldstwg ssaaggkktw sppggfqrss wgirv
//
LOCUS       XP_061015273             395 aa            linear   MAM 02-DEC-2023
DEFINITION  ovarian cancer G-protein coupled receptor 1 isoform X1 [Dama dama].
ACCESSION   XP_061015273
VERSION     XP_061015273.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159290.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..395
                     /product="ovarian cancer G-protein coupled receptor 1
                     isoform X1"
                     /calculated_mol_wt=44226
     Region          32..307
                     /region_name="7tmA_GPR68_OGR1"
                     /note="G protein-coupled receptor 68, member of the class
                     A family of seven-transmembrane G protein-coupled
                     receptors; cd15367"
                     /db_xref="CDD:320489"
     Region          32..59
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320489"
     Region          66..91
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320489"
     Site            order(87,90..91,104..109,111..112,115,160,162..166,192,
                     195..197,199..201,203..204,251,254..255,257..258,261,
                     274..275,277..279,282,285..286)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320489"
     Region          104..134
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320489"
     Region          146..168
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320489"
     Region          192..221
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320489"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320489"
     Region          275..300
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320489"
     CDS             1..395
                     /gene="GPR68"
                     /coded_by="XM_061159290.1:353..1540"
                     /db_xref="GeneID:133068171"
ORIGIN      
        1 mggeapagpk mgnitadnts mncdidhtih qtlapvvyit vlvlgfpanc lslyygylqi
       61 karnelgvyl cnltvadlfy icslpfwlqy vlqhdhwshd dlscqvcgil lyeniyisvg
      121 flccisidry lavahpfrfh qfrtlkaamg vsaliwakel ltsvyflmhe evvedadrhr
      181 vcfehyplep rqrginyyrf lvgflfpicl llasyrgilr avrrshgtqk srkdqiqrlv
      241 lstvviflac flpyhalllv rslwesscdf akgifnayhf sllltsfncv adpvlycfvs
      301 etthrdlarl cgaclafltc artgrarety plgapeasgk sedpegaccd crvqqgcwps
      361 vgmsldstwg ssaaggkktw sppggfqrss wgirv
//
LOCUS       XP_061015274             371 aa            linear   MAM 02-DEC-2023
DEFINITION  ovarian cancer G-protein coupled receptor 1 isoform X2 [Dama dama].
ACCESSION   XP_061015274
VERSION     XP_061015274.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159291.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..371
                     /product="ovarian cancer G-protein coupled receptor 1
                     isoform X2"
                     /calculated_mol_wt=41515
     Region          32..307
                     /region_name="7tmA_GPR68_OGR1"
                     /note="G protein-coupled receptor 68, member of the class
                     A family of seven-transmembrane G protein-coupled
                     receptors; cd15367"
                     /db_xref="CDD:320489"
     Region          32..59
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320489"
     Region          66..91
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320489"
     Site            order(87,90..91,104..109,111..112,115,160,162..166,192,
                     195..197,199..201,203..204,251,254..255,257..258,261,
                     274..275,277..279,282,285..286)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320489"
     Region          104..134
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320489"
     Region          146..168
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320489"
     Region          192..221
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320489"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320489"
     Region          275..300
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320489"
     CDS             1..371
                     /gene="GPR68"
                     /coded_by="XM_061159291.1:360..1475"
                     /db_xref="GeneID:133068171"
ORIGIN      
        1 mggeapagpk mgnitadnts mncdidhtih qtlapvvyit vlvlgfpanc lslyygylqi
       61 karnelgvyl cnltvadlfy icslpfwlqy vlqhdhwshd dlscqvcgil lyeniyisvg
      121 flccisidry lavahpfrfh qfrtlkaamg vsaliwakel ltsvyflmhe evvedadrhr
      181 vcfehyplep rqrginyyrf lvgflfpicl llasyrgilr avrrshgtqk srkdqiqrlv
      241 lstvviflac flpyhalllv rslwesscdf akgifnayhf sllltsfncv adpvlycfvs
      301 etthrdlarl cgaclafltc artgrarety plgapeasgk sedpevltkl hpafqtphpp
      361 gvggspaggl s
//
LOCUS       XP_061015275            2011 aa            linear   MAM 02-DEC-2023
DEFINITION  protein Daple isoform X1 [Dama dama].
ACCESSION   XP_061015275
VERSION     XP_061015275.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159292.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2011
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2011
                     /product="protein Daple isoform X1"
                     /calculated_mol_wt=225914
     Region          12..164
                     /region_name="HkD_Daple"
                     /note="Hook domain found in Daple (Dvl-associating protein
                     with a high frequency of leucine residues) and similar
                     proteins; cd22228"
                     /db_xref="CDD:411799"
     Site            order(132,138,141..142,144,149,152..153,155..156,159..160,
                     163)
                     /site_type="other"
                     /note="putative LIC-binding interface [polypeptide
                     binding]"
                     /db_xref="CDD:411799"
     Region          <248..>837
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          596..>1382
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          1414..>1790
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          <1603..1997
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..2011
                     /gene="CCDC88C"
                     /coded_by="XM_061159292.1:90..6125"
                     /db_xref="GeneID:133068174"
ORIGIN      
        1 mdvtvselme lflqsplvtw vktfgpfgsg nqdnltmymd ladgiflnqi mlqidprptn
       61 qrinkhvnnd vnlriqnlti lvrniktyyq evlqqlivmn lpnvlmigkd plsgksmeei
      121 kkvlllvlgc avqcerkeef ierikqldie tqagivahiq evtqnqenvf dlqwlelpdv
      181 apeelealsr nmvfhlrrli derdecteli vdltqerdyl qaqhppsplk sssaestpsp
      241 tsslssedkq hlaveladtk arlrrvrqel eekteqlvdt rhevdqlvle lqkvkqeniq
      301 laadarsara yrdeldslre kanrverlem eltrcreklh dvdfykarme elredniili
      361 etkamleeql taarargdkv helekenlql ksklhdleld rdtdkkriee lleenmvlei
      421 aqkqsmnesa hlgweleqls knadlsdasr ksfvfelnec assrilklek enqslqstiq
      481 glrdaslale esslkcgelq kenqqlskki eklqtqlere kqsnqdletl seelikekeq
      541 lqndmetlka drarqikdle qekdhlnqav wtlrersqvg searakdveq enkallrtva
      601 etsgrlsrle reqqqlqral eqaqekagra ealeqelgrl eqrasalqva geraeaaere
      661 shglalenrq lrksldalqn vsvqlagler dnrqldeenl elrrmveamr ftgakvaqme
      721 renqelerek qelrksvell kalgkkserl elsyqslsae nlrlqqslds ggqkaqaler
      781 elgqleaenq glrrdlealr lahrqlerae qerkaleqev aqlekdkkll ekearrlwqq
      841 velkdavldd ssaklsaaer esraldkela rcrdaagklk elekdnrdlt kqvtmhtrtl
      901 ttlredlvqe klksqqlsse ldrlsqelek vglhkelllq ddnsngdtky kilesinesa
      961 lkttlamkee kiafleaqve ekaslnhqlq neiqvlkkec eilkqsqegg tqaqnsfkhp
     1021 mgtsveghpg kepwapihke atmellrvkd raielernna alqaekqllk eqlqhletqn
     1081 tafssqiltl qkqstflqeh nttlqtqtak lqvenstlts qsaslsaqya llqsqqtake
     1141 sehenlqkqq eqlaaayqal lqdhehlgal herqaaeyea liqqhsclkt lhrslelehk
     1201 elgerhsdml khkaeldele kvlraereal qqeqrtsama asenqrlree ldrvnflhhq
     1261 lkgeyeelht htkelktsln ssqlelnrwq arfdqlkeqh qnmdisltkl dnhcellsrl
     1321 kgnleeenhh llsqiqllsq qnqmlleqnl enkeqyheeq kqyidklnal rrhkekleek
     1381 imdqykfydp apkkknhwig akalvklikp kkegsrerlk sttdspprql espdptlpsa
     1441 sqplrsqpen pestpsgssc peerdthngp lgkgpgdlkp krgsphrgsl drkdastdpa
     1501 lkpwpmelgp rpcstsaitt tpsssssisr hpgrtkgcns edslceqsle leflhprqya
     1561 srpgslessr nassdsspln lkgssdqlhg rsesfssedl ipsrdtatlp rdastpgrpp
     1621 lsrheypppr ngplpqegvq krsaaqphgg vrpcstspss emvtleefle esnrdspspd
     1681 apscrddlls dyfrkagdlp siggqpgppp rkegakmpts fvaptikmpv stsegkplkp
     1741 gqyvkpnfra aeaeaapsvp qrqaqppqsl slgrarqatm ppashtpagr saslnrafsl
     1801 asadllrasg peackqelag peasggrdpg shnlqsstap gshglarert plvgkaggsc
     1861 qgpgprsrpl dlrrfslapp keerlaplqq satspaiatg ggggsslqlq hfsptaaqaa
     1921 rtkpqaplhp gevatippvr gglspsegdg vpgqghsegl pakgpgrspd lapqgsrape
     1981 dfgrgsssks tpaspepggd qqtvwyeygc v
//
LOCUS       XP_061015276            1988 aa            linear   MAM 02-DEC-2023
DEFINITION  protein Daple isoform X2 [Dama dama].
ACCESSION   XP_061015276
VERSION     XP_061015276.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159293.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1988
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1988
                     /product="protein Daple isoform X2"
                     /calculated_mol_wt=223572
     Region          12..164
                     /region_name="HkD_Daple"
                     /note="Hook domain found in Daple (Dvl-associating protein
                     with a high frequency of leucine residues) and similar
                     proteins; cd22228"
                     /db_xref="CDD:411799"
     Site            order(132,138,141..142,144,149,152..153,155..156,159..160,
                     163)
                     /site_type="other"
                     /note="putative LIC-binding interface [polypeptide
                     binding]"
                     /db_xref="CDD:411799"
     Region          <248..>837
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          596..>1382
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          1414..>1660
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          <1552..1974
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1988
                     /gene="CCDC88C"
                     /coded_by="XM_061159293.1:90..6056"
                     /db_xref="GeneID:133068174"
ORIGIN      
        1 mdvtvselme lflqsplvtw vktfgpfgsg nqdnltmymd ladgiflnqi mlqidprptn
       61 qrinkhvnnd vnlriqnlti lvrniktyyq evlqqlivmn lpnvlmigkd plsgksmeei
      121 kkvlllvlgc avqcerkeef ierikqldie tqagivahiq evtqnqenvf dlqwlelpdv
      181 apeelealsr nmvfhlrrli derdecteli vdltqerdyl qaqhppsplk sssaestpsp
      241 tsslssedkq hlaveladtk arlrrvrqel eekteqlvdt rhevdqlvle lqkvkqeniq
      301 laadarsara yrdeldslre kanrverlem eltrcreklh dvdfykarme elredniili
      361 etkamleeql taarargdkv helekenlql ksklhdleld rdtdkkriee lleenmvlei
      421 aqkqsmnesa hlgweleqls knadlsdasr ksfvfelnec assrilklek enqslqstiq
      481 glrdaslale esslkcgelq kenqqlskki eklqtqlere kqsnqdletl seelikekeq
      541 lqndmetlka drarqikdle qekdhlnqav wtlrersqvg searakdveq enkallrtva
      601 etsgrlsrle reqqqlqral eqaqekagra ealeqelgrl eqrasalqva geraeaaere
      661 shglalenrq lrksldalqn vsvqlagler dnrqldeenl elrrmveamr ftgakvaqme
      721 renqelerek qelrksvell kalgkkserl elsyqslsae nlrlqqslds ggqkaqaler
      781 elgqleaenq glrrdlealr lahrqlerae qerkaleqev aqlekdkkll ekearrlwqq
      841 velkdavldd ssaklsaaer esraldkela rcrdaagklk elekdnrdlt kqvtmhtrtl
      901 ttlredlvqe klksqqlsse ldrlsqelek vglhkelllq ddnsngdtky kilesinesa
      961 lkttlamkee kiafleaqve ekaslnhqlq neiqvlkkec eilkqsqegg tqaqnsfkhp
     1021 mgtsveghpg kepwapihke atmellrvkd raielernna alqaekqllk eqlqhletqn
     1081 tafssqiltl qkqstflqeh nttlqtqtak lqvenstlts qsaslsaqya llqsqqtake
     1141 sehenlqkqq eqlaaayqal lqdhehlgal herqaaeyea liqqhsclkt lhrslelehk
     1201 elgerhsdml khkaeldele kvlraereal qqeqrtsama asenqrlree ldrvnflhhq
     1261 lkgeyeelht htkelktsln ssqlelnrwq arfdqlkeqh qnmdisltkl dnhcellsrl
     1321 kgnleeenhh llsqiqllsq qnqmlleqnl enkeqyheeq kqyidklnal rrhkekleek
     1381 imdqykfydp apkkknhwig akalvklikp kkegsrerlk sttdspprql espdptlpsa
     1441 sqplrsqpen pestpsgssc peerdthngp lgkgpgdlkp krgsphrgsl drkdastdpa
     1501 lkpwpmelgp rpcstsaitt tpsssssisr hpgrtkgcns edslceqsle leflhprqyg
     1561 ssdqlhgrse sfssedlips rdtatlprda stpgrpplsr heyppprngp lpqegvqkrs
     1621 aaqphggvrp cstspssemv tleefleesn rdspspdaps crddllsdyf rkagdlpsig
     1681 gqpgppprke gakmptsfva ptikmpvsts egkplkpgqy vkpnfraaea eaapsvpqrq
     1741 aqppqslslg rarqatmppa shtpagrsas lnrafslasa dllrasgpea ckqelagpea
     1801 sggrdpgshn lqsstapgsh glarertplv gkaggscqgp gprsrpldlr rfslappkee
     1861 rlaplqqsat spaiatgggg gsslqlqhfs ptaaqaartk pqaplhpgev atippvrggl
     1921 spsegdgvpg qghseglpak gpgrspdlap qgsrapedfg rgssskstpa spepggdqqt
     1981 vwyeygcv
//
LOCUS       XP_061015277            1863 aa            linear   MAM 02-DEC-2023
DEFINITION  protein Daple isoform X3 [Dama dama].
ACCESSION   XP_061015277
VERSION     XP_061015277.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159294.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1863
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1863
                     /product="protein Daple isoform X3"
                     /calculated_mol_wt=209024
     Region          <100..>689
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          448..>1234
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          1266..>1642
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          <1455..1849
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1863
                     /gene="CCDC88C"
                     /coded_by="XM_061159294.1:33..5624"
                     /db_xref="GeneID:133068174"
ORIGIN      
        1 mhekdmsrst seqvtqnqen vfdlqwlelp dvapeeleal srnmvfhlrr liderdecte
       61 livdltqerd ylqaqhppsp lksssaestp sptsslssed kqhlavelad tkarlrrvrq
      121 eleekteqlv dtrhevdqlv lelqkvkqen iqlaadarsa rayrdeldsl rekanrverl
      181 emeltrcrek lhdvdfykar meelrednii lietkamlee qltaarargd kvhelekenl
      241 qlksklhdle ldrdtdkkri eelleenmvl eiaqkqsmne sahlgweleq lsknadlsda
      301 srksfvfeln ecassrilkl ekenqslqst iqglrdasla leesslkcge lqkenqqlsk
      361 kieklqtqle rekqsnqdle tlseelikek eqlqndmetl kadrarqikd leqekdhlnq
      421 avwtlrersq vgsearakdv eqenkallrt vaetsgrlsr lereqqqlqr aleqaqekag
      481 raealeqelg rleqrasalq vageraeaae reshglalen rqlrksldal qnvsvqlagl
      541 erdnrqldee nlelrrmvea mrftgakvaq merenqeler ekqelrksve llkalgkkse
      601 rlelsyqsls aenlrlqqsl dsggqkaqal erelgqleae nqglrrdlea lrlahrqler
      661 aeqerkaleq evaqlekdkk llekearrlw qqvelkdavl ddssaklsaa eresraldke
      721 larcrdaagk lkelekdnrd ltkqvtmhtr tlttlredlv qeklksqqls seldrlsqel
      781 ekvglhkell lqddnsngdt kykilesine salkttlamk eekiafleaq veekaslnhq
      841 lqneiqvlkk eceilkqsqe ggtqaqnsfk hpmgtsvegh pgkepwapih keatmellrv
      901 kdraielern naalqaekql lkeqlqhlet qntafssqil tlqkqstflq ehnttlqtqt
      961 aklqvenstl tsqsaslsaq yallqsqqta kesehenlqk qqeqlaaayq allqdhehlg
     1021 alherqaaey ealiqqhscl ktlhrslele hkelgerhsd mlkhkaelde lekvlraere
     1081 alqqeqrtsa maasenqrlr eeldrvnflh hqlkgeyeel hthtkelkts lnssqlelnr
     1141 wqarfdqlke qhqnmdislt kldnhcells rlkgnleeen hhllsqiqll sqqnqmlleq
     1201 nlenkeqyhe eqkqyidkln alrrhkekle ekimdqykfy dpapkkknhw igakalvkli
     1261 kpkkegsrer lksttdsppr qlespdptlp sasqplrsqp enpestpsgs scpeerdthn
     1321 gplgkgpgdl kpkrgsphrg sldrkdastd palkpwpmel gprpcstsai tttpsssssi
     1381 srhpgrtkgc nsedslceqs leleflhprq yasrpgsles srnassdssp lnlkgssdql
     1441 hgrsesfsse dlipsrdtat lprdastpgr pplsrheypp prngplpqeg vqkrsaaqph
     1501 ggvrpcstsp ssemvtleef leesnrdsps pdapscrddl lsdyfrkagd lpsiggqpgp
     1561 pprkegakmp tsfvaptikm pvstsegkpl kpgqyvkpnf raaeaeaaps vpqrqaqppq
     1621 slslgrarqa tmppashtpa grsaslnraf slasadllra sgpeackqel agpeasggrd
     1681 pgshnlqsst apgshglare rtplvgkagg scqgpgprsr pldlrrfsla ppkeerlapl
     1741 qqsatspaia tgggggsslq lqhfsptaaq aartkpqapl hpgevatipp vrgglspseg
     1801 dgvpgqghse glpakgpgrs pdlapqgsra pedfgrgsss kstpaspepg gdqqtvwyey
     1861 gcv
//
LOCUS       XP_061015279             833 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein phosphatase 4 regulatory subunit 3A
            isoform X1 [Dama dama].
ACCESSION   XP_061015279
VERSION     XP_061015279.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159296.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..833
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..833
                     /product="serine/threonine-protein phosphatase 4
                     regulatory subunit 3A isoform X1"
                     /calculated_mol_wt=95131
     Region          7..>65
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          166..357
                     /region_name="PP4R3"
                     /note="Phosphatase 4 regulatory subunit 3; pfam04802"
                     /db_xref="CDD:461435"
     CDS             1..833
                     /gene="PPP4R3A"
                     /coded_by="XM_061159296.1:140..2641"
                     /db_xref="GeneID:133068175"
ORIGIN      
        1 mtdtrrrvkv ytlnedrqwd drgtghvssg yverlkgmsl lvraesdgsl lleskinpnt
       61 ayqkqqdtli vwseaenydl alsfqekagc deiwekicqv qgkdpsvdit qdlvdeseee
      121 rfddmsspgl elpscelsrl eeiaelvass lpsplrrekl alalenegyi kkllelfhvc
      181 edlenieglh hlyeiikgif llnrtalfev mfseecimdv igcleydpal sqprkhrefl
      241 tktakfkevi pisdpelkqk ihqtyrvqyi qdmvlptpsv feenmlstlh sfiffnkvei
      301 vgmlqedekf ltdlfaqltd eatdeekrqe lvnflkefca fsqtlqpqnr daffktlsnm
      361 gilpalevil gmddtqvrsa atdifsylve ynpsmvrefv mqeaqqnddv skklteqkit
      421 nkdillinli iehmicdtdp elggavqlmg llrtlvdpen mlatanktek teflgffykh
      481 cmhvltapll anttedkpsk ddfqtaqlla lvlelltfcv ehhtyhikny iinkdilrrv
      541 lvlmaskhaf lalcalrfkr kiiglkdefy nryimksflf epvvkaflnn gsrynlmnsa
      601 iiemfefirv ediksltahv venywkaled vdyvqtfkgl klrfeqqrer qdnpkldsmr
      661 silrnhryrr dartledeee mwfntdeddm edgeavvsps dkakndddim dpiskfmerk
      721 klkeseekev llktnlsgrq spsfklslss gtkttlssqs paanlpgspg spgspgspgs
      781 pgsipkstsq taaittkggl vglvdypddd edddedddke dtlplskkak fes
//
LOCUS       XP_061015280             820 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein phosphatase 4 regulatory subunit 3A
            isoform X2 [Dama dama].
ACCESSION   XP_061015280
VERSION     XP_061015280.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159297.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..820
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..820
                     /product="serine/threonine-protein phosphatase 4
                     regulatory subunit 3A isoform X2"
                     /calculated_mol_wt=93632
     Region          7..>65
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          166..357
                     /region_name="PP4R3"
                     /note="Phosphatase 4 regulatory subunit 3; pfam04802"
                     /db_xref="CDD:461435"
     Region          <325..402
                     /region_name="LPD_N"
                     /note="Lipoprotein N-terminal Domain; smart00638"
                     /db_xref="CDD:214755"
     CDS             1..820
                     /gene="PPP4R3A"
                     /coded_by="XM_061159297.1:140..2602"
                     /db_xref="GeneID:133068175"
ORIGIN      
        1 mtdtrrrvkv ytlnedrqwd drgtghvssg yverlkgmsl lvraesdgsl lleskinpnt
       61 ayqkqqdtli vwseaenydl alsfqekagc deiwekicqv qgkdpsvdit qdlvdeseee
      121 rfddmsspgl elpscelsrl eeiaelvass lpsplrrekl alalenegyi kkllelfhvc
      181 edlenieglh hlyeiikgif llnrtalfev mfseecimdv igcleydpal sqprkhrefl
      241 tktakfkevi pisdpelkqk ihqtyrvqyi qdmvlptpsv feenmlstlh sfiffnkvei
      301 vgmlqedekf ltdlfaqltd eatdeekrqe lvnflkefca fsqtlqpqnr daffktlsnm
      361 gilpalevil gmddtqvrsa atdifsylve ynpsmvrefv mqeaqqnddd illinliieh
      421 micdtdpelg gavqlmgllr tlvdpenmla tanktektef lgffykhcmh vltapllant
      481 tedkpskddf qtaqllalvl elltfcvehh tyhiknyiin kdilrrvlvl maskhaflal
      541 calrfkrkii glkdefynry imksflfepv vkaflnngsr ynlmnsaiie mfefirvedi
      601 ksltahvven ywkaledvdy vqtfkglklr feqqrerqdn pkldsmrsil rnhryrrdar
      661 tledeeemwf ntdeddmedg eavvspsdka kndddimdpi skfmerkklk eseekevllk
      721 tnlsgrqsps fklslssgtk ttlssqspaa nlpgspgspg spgspgspgs ipkstsqtaa
      781 ittkgglvgl vdypdddedd dedddkedtl plskkakfes
//
LOCUS       XP_061015281             709 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein phosphatase 4 regulatory subunit 3A
            isoform X3 [Dama dama].
ACCESSION   XP_061015281
VERSION     XP_061015281.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159298.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..709
                     /product="serine/threonine-protein phosphatase 4
                     regulatory subunit 3A isoform X3"
                     /calculated_mol_wt=80871
     Region          42..233
                     /region_name="PP4R3"
                     /note="Phosphatase 4 regulatory subunit 3; pfam04802"
                     /db_xref="CDD:461435"
     CDS             1..709
                     /gene="PPP4R3A"
                     /coded_by="XM_061159298.1:1662..3791"
                     /db_xref="GeneID:133068175"
ORIGIN      
        1 msspglelps celsrleeia elvasslpsp lrreklalal enegyikkll elfhvcedle
       61 nieglhhlye iikgifllnr talfevmfse ecimdvigcl eydpalsqpr khrefltkta
      121 kfkevipisd pelkqkihqt yrvqyiqdmv lptpsvfeen mlstlhsfif fnkveivgml
      181 qedekfltdl faqltdeatd eekrqelvnf lkefcafsqt lqpqnrdaff ktlsnmgilp
      241 alevilgmdd tqvrsaatdi fsylveynps mvrefvmqea qqnddvskkl teqkitnkdi
      301 llinliiehm icdtdpelgg avqlmgllrt lvdpenmlat anktektefl gffykhcmhv
      361 ltapllantt edkpskddfq taqllalvle lltfcvehht yhiknyiink dilrrvlvlm
      421 askhaflalc alrfkrkiig lkdefynryi mksflfepvv kaflnngsry nlmnsaiiem
      481 fefirvedik sltahvveny wkaledvdyv qtfkglklrf eqqrerqdnp kldsmrsilr
      541 nhryrrdart ledeeemwfn tdeddmedge avvspsdkak ndddimdpis kfmerkklke
      601 seekevllkt nlsgrqspsf klslssgtkt tlssqspaan lpgspgspgs pgspgspgsi
      661 pkstsqtaai ttkgglvglv dypdddeddd edddkedtlp lskkakfes
//
LOCUS       XP_061015282             490 aa            linear   MAM 02-DEC-2023
DEFINITION  tandem C2 domains nuclear protein isoform X1 [Dama dama].
ACCESSION   XP_061015282
VERSION     XP_061015282.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159299.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..490
                     /product="tandem C2 domains nuclear protein isoform X1"
                     /calculated_mol_wt=55083
     Region          240..342
                     /region_name="C2A_Tac2-N"
                     /note="C2 domain first repeat found in Tac2-N (Tandem C2
                     protein in Nucleus); cd08684"
                     /db_xref="CDD:176066"
     Region          353..487
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     CDS             1..490
                     /gene="TC2N"
                     /coded_by="XM_061159299.1:582..2054"
                     /db_xref="GeneID:133068176"
ORIGIN      
        1 matefikscc rgcfyggrek hnlsverdfk aavshsqntt isippltsvs vkpqvgcsed
       61 yllsklpsdg kevpfvvprf klsyiqprtq gtpsqleele gsarasfgdr kaelsssaqh
      121 gpsydvynpf ykyqhvspdl srrfpprsea trlygsvcdl rtnrlpsppg lsksmfdlts
      181 ssqrfiqrhd slssvpssss srknsqgsnr sldtitlsgd erdwgrlnvk vfynssveqi
      241 witvlqcrdl swpsrygdtp tisvkgiltl pkpvhfkssv kegsnniefm etfvfsiklq
      301 slqtvrlvfk iqtqtprkkt igecslslrt lstqemdysl disppskvsv chaelelgtc
      361 fqavnsriql qileaqylps sstpltlsff vkvamfssge liykkktrll kasngrvkwg
      421 etmifpliqs ekeiiflikl ysrssvgrrh fvgqiwised snnteavsqw ketvthpekv
      481 vikwhklnps
//
LOCUS       XP_061015283             490 aa            linear   MAM 02-DEC-2023
DEFINITION  tandem C2 domains nuclear protein isoform X1 [Dama dama].
ACCESSION   XP_061015283
VERSION     XP_061015283.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159300.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..490
                     /product="tandem C2 domains nuclear protein isoform X1"
                     /calculated_mol_wt=55083
     Region          240..342
                     /region_name="C2A_Tac2-N"
                     /note="C2 domain first repeat found in Tac2-N (Tandem C2
                     protein in Nucleus); cd08684"
                     /db_xref="CDD:176066"
     Region          353..487
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     CDS             1..490
                     /gene="TC2N"
                     /coded_by="XM_061159300.1:310..1782"
                     /db_xref="GeneID:133068176"
ORIGIN      
        1 matefikscc rgcfyggrek hnlsverdfk aavshsqntt isippltsvs vkpqvgcsed
       61 yllsklpsdg kevpfvvprf klsyiqprtq gtpsqleele gsarasfgdr kaelsssaqh
      121 gpsydvynpf ykyqhvspdl srrfpprsea trlygsvcdl rtnrlpsppg lsksmfdlts
      181 ssqrfiqrhd slssvpssss srknsqgsnr sldtitlsgd erdwgrlnvk vfynssveqi
      241 witvlqcrdl swpsrygdtp tisvkgiltl pkpvhfkssv kegsnniefm etfvfsiklq
      301 slqtvrlvfk iqtqtprkkt igecslslrt lstqemdysl disppskvsv chaelelgtc
      361 fqavnsriql qileaqylps sstpltlsff vkvamfssge liykkktrll kasngrvkwg
      421 etmifpliqs ekeiiflikl ysrssvgrrh fvgqiwised snnteavsqw ketvthpekv
      481 vikwhklnps
//
LOCUS       XP_061015284             490 aa            linear   MAM 02-DEC-2023
DEFINITION  tandem C2 domains nuclear protein isoform X1 [Dama dama].
ACCESSION   XP_061015284
VERSION     XP_061015284.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159301.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..490
                     /product="tandem C2 domains nuclear protein isoform X1"
                     /calculated_mol_wt=55083
     Region          240..342
                     /region_name="C2A_Tac2-N"
                     /note="C2 domain first repeat found in Tac2-N (Tandem C2
                     protein in Nucleus); cd08684"
                     /db_xref="CDD:176066"
     Region          353..487
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     CDS             1..490
                     /gene="TC2N"
                     /coded_by="XM_061159301.1:1298..2770"
                     /db_xref="GeneID:133068176"
ORIGIN      
        1 matefikscc rgcfyggrek hnlsverdfk aavshsqntt isippltsvs vkpqvgcsed
       61 yllsklpsdg kevpfvvprf klsyiqprtq gtpsqleele gsarasfgdr kaelsssaqh
      121 gpsydvynpf ykyqhvspdl srrfpprsea trlygsvcdl rtnrlpsppg lsksmfdlts
      181 ssqrfiqrhd slssvpssss srknsqgsnr sldtitlsgd erdwgrlnvk vfynssveqi
      241 witvlqcrdl swpsrygdtp tisvkgiltl pkpvhfkssv kegsnniefm etfvfsiklq
      301 slqtvrlvfk iqtqtprkkt igecslslrt lstqemdysl disppskvsv chaelelgtc
      361 fqavnsriql qileaqylps sstpltlsff vkvamfssge liykkktrll kasngrvkwg
      421 etmifpliqs ekeiiflikl ysrssvgrrh fvgqiwised snnteavsqw ketvthpekv
      481 vikwhklnps
//
LOCUS       XP_061015285             490 aa            linear   MAM 02-DEC-2023
DEFINITION  tandem C2 domains nuclear protein isoform X1 [Dama dama].
ACCESSION   XP_061015285
VERSION     XP_061015285.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159302.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..490
                     /product="tandem C2 domains nuclear protein isoform X1"
                     /calculated_mol_wt=55083
     Region          240..342
                     /region_name="C2A_Tac2-N"
                     /note="C2 domain first repeat found in Tac2-N (Tandem C2
                     protein in Nucleus); cd08684"
                     /db_xref="CDD:176066"
     Region          353..487
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     CDS             1..490
                     /gene="TC2N"
                     /coded_by="XM_061159302.1:255..1727"
                     /db_xref="GeneID:133068176"
ORIGIN      
        1 matefikscc rgcfyggrek hnlsverdfk aavshsqntt isippltsvs vkpqvgcsed
       61 yllsklpsdg kevpfvvprf klsyiqprtq gtpsqleele gsarasfgdr kaelsssaqh
      121 gpsydvynpf ykyqhvspdl srrfpprsea trlygsvcdl rtnrlpsppg lsksmfdlts
      181 ssqrfiqrhd slssvpssss srknsqgsnr sldtitlsgd erdwgrlnvk vfynssveqi
      241 witvlqcrdl swpsrygdtp tisvkgiltl pkpvhfkssv kegsnniefm etfvfsiklq
      301 slqtvrlvfk iqtqtprkkt igecslslrt lstqemdysl disppskvsv chaelelgtc
      361 fqavnsriql qileaqylps sstpltlsff vkvamfssge liykkktrll kasngrvkwg
      421 etmifpliqs ekeiiflikl ysrssvgrrh fvgqiwised snnteavsqw ketvthpekv
      481 vikwhklnps
//
LOCUS       XP_061015286             490 aa            linear   MAM 02-DEC-2023
DEFINITION  tandem C2 domains nuclear protein isoform X1 [Dama dama].
ACCESSION   XP_061015286
VERSION     XP_061015286.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159303.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..490
                     /product="tandem C2 domains nuclear protein isoform X1"
                     /calculated_mol_wt=55083
     Region          240..342
                     /region_name="C2A_Tac2-N"
                     /note="C2 domain first repeat found in Tac2-N (Tandem C2
                     protein in Nucleus); cd08684"
                     /db_xref="CDD:176066"
     Region          353..487
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     CDS             1..490
                     /gene="TC2N"
                     /coded_by="XM_061159303.1:137..1609"
                     /db_xref="GeneID:133068176"
ORIGIN      
        1 matefikscc rgcfyggrek hnlsverdfk aavshsqntt isippltsvs vkpqvgcsed
       61 yllsklpsdg kevpfvvprf klsyiqprtq gtpsqleele gsarasfgdr kaelsssaqh
      121 gpsydvynpf ykyqhvspdl srrfpprsea trlygsvcdl rtnrlpsppg lsksmfdlts
      181 ssqrfiqrhd slssvpssss srknsqgsnr sldtitlsgd erdwgrlnvk vfynssveqi
      241 witvlqcrdl swpsrygdtp tisvkgiltl pkpvhfkssv kegsnniefm etfvfsiklq
      301 slqtvrlvfk iqtqtprkkt igecslslrt lstqemdysl disppskvsv chaelelgtc
      361 fqavnsriql qileaqylps sstpltlsff vkvamfssge liykkktrll kasngrvkwg
      421 etmifpliqs ekeiiflikl ysrssvgrrh fvgqiwised snnteavsqw ketvthpekv
      481 vikwhklnps
//
LOCUS       XP_061015287             490 aa            linear   MAM 02-DEC-2023
DEFINITION  tandem C2 domains nuclear protein isoform X1 [Dama dama].
ACCESSION   XP_061015287
VERSION     XP_061015287.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159304.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..490
                     /product="tandem C2 domains nuclear protein isoform X1"
                     /calculated_mol_wt=55083
     Region          240..342
                     /region_name="C2A_Tac2-N"
                     /note="C2 domain first repeat found in Tac2-N (Tandem C2
                     protein in Nucleus); cd08684"
                     /db_xref="CDD:176066"
     Region          353..487
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     CDS             1..490
                     /gene="TC2N"
                     /coded_by="XM_061159304.1:1120..2592"
                     /db_xref="GeneID:133068176"
ORIGIN      
        1 matefikscc rgcfyggrek hnlsverdfk aavshsqntt isippltsvs vkpqvgcsed
       61 yllsklpsdg kevpfvvprf klsyiqprtq gtpsqleele gsarasfgdr kaelsssaqh
      121 gpsydvynpf ykyqhvspdl srrfpprsea trlygsvcdl rtnrlpsppg lsksmfdlts
      181 ssqrfiqrhd slssvpssss srknsqgsnr sldtitlsgd erdwgrlnvk vfynssveqi
      241 witvlqcrdl swpsrygdtp tisvkgiltl pkpvhfkssv kegsnniefm etfvfsiklq
      301 slqtvrlvfk iqtqtprkkt igecslslrt lstqemdysl disppskvsv chaelelgtc
      361 fqavnsriql qileaqylps sstpltlsff vkvamfssge liykkktrll kasngrvkwg
      421 etmifpliqs ekeiiflikl ysrssvgrrh fvgqiwised snnteavsqw ketvthpekv
      481 vikwhklnps
//
LOCUS       XP_061015288             490 aa            linear   MAM 02-DEC-2023
DEFINITION  tandem C2 domains nuclear protein isoform X1 [Dama dama].
ACCESSION   XP_061015288
VERSION     XP_061015288.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159305.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..490
                     /product="tandem C2 domains nuclear protein isoform X1"
                     /calculated_mol_wt=55083
     Region          240..342
                     /region_name="C2A_Tac2-N"
                     /note="C2 domain first repeat found in Tac2-N (Tandem C2
                     protein in Nucleus); cd08684"
                     /db_xref="CDD:176066"
     Region          353..487
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     CDS             1..490
                     /gene="TC2N"
                     /coded_by="XM_061159305.1:81..1553"
                     /db_xref="GeneID:133068176"
ORIGIN      
        1 matefikscc rgcfyggrek hnlsverdfk aavshsqntt isippltsvs vkpqvgcsed
       61 yllsklpsdg kevpfvvprf klsyiqprtq gtpsqleele gsarasfgdr kaelsssaqh
      121 gpsydvynpf ykyqhvspdl srrfpprsea trlygsvcdl rtnrlpsppg lsksmfdlts
      181 ssqrfiqrhd slssvpssss srknsqgsnr sldtitlsgd erdwgrlnvk vfynssveqi
      241 witvlqcrdl swpsrygdtp tisvkgiltl pkpvhfkssv kegsnniefm etfvfsiklq
      301 slqtvrlvfk iqtqtprkkt igecslslrt lstqemdysl disppskvsv chaelelgtc
      361 fqavnsriql qileaqylps sstpltlsff vkvamfssge liykkktrll kasngrvkwg
      421 etmifpliqs ekeiiflikl ysrssvgrrh fvgqiwised snnteavsqw ketvthpekv
      481 vikwhklnps
//
LOCUS       XP_061015289             396 aa            linear   MAM 02-DEC-2023
DEFINITION  tandem C2 domains nuclear protein isoform X2 [Dama dama].
ACCESSION   XP_061015289
VERSION     XP_061015289.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159306.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..396
                     /product="tandem C2 domains nuclear protein isoform X2"
                     /calculated_mol_wt=44075
     Region          240..342
                     /region_name="C2A_Tac2-N"
                     /note="C2 domain first repeat found in Tac2-N (Tandem C2
                     protein in Nucleus); cd08684"
                     /db_xref="CDD:176066"
     Region          353..>394
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     CDS             1..396
                     /gene="TC2N"
                     /coded_by="XM_061159306.1:604..1794"
                     /db_xref="GeneID:133068176"
ORIGIN      
        1 matefikscc rgcfyggrek hnlsverdfk aavshsqntt isippltsvs vkpqvgcsed
       61 yllsklpsdg kevpfvvprf klsyiqprtq gtpsqleele gsarasfgdr kaelsssaqh
      121 gpsydvynpf ykyqhvspdl srrfpprsea trlygsvcdl rtnrlpsppg lsksmfdlts
      181 ssqrfiqrhd slssvpssss srknsqgsnr sldtitlsgd erdwgrlnvk vfynssveqi
      241 witvlqcrdl swpsrygdtp tisvkgiltl pkpvhfkssv kegsnniefm etfvfsiklq
      301 slqtvrlvfk iqtqtprkkt igecslslrt lstqemdysl disppskvsv chaelelgtc
      361 fqavnsriql qileaqylps sstpltlsff cesgnv
//
LOCUS       XP_061015290             461 aa            linear   MAM 02-DEC-2023
DEFINITION  fibulin-5 isoform X1 [Dama dama].
ACCESSION   XP_061015290
VERSION     XP_061015290.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159307.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..461
                     /product="fibulin-5 isoform X1"
                     /calculated_mol_wt=51619
     Region          140..171
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF domain; pfam07645"
                     /db_xref="CDD:429571"
     Region          188..218
                     /region_name="FXa_inhibition"
                     /note="Coagulation Factor Xa inhibitory site; pfam14670"
                     /db_xref="CDD:464251"
     Region          220..258
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(220,223,236)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          271..299
                     /region_name="FXa_inhibition"
                     /note="Coagulation Factor Xa inhibitory site; pfam14670"
                     /db_xref="CDD:464251"
     CDS             1..461
                     /gene="FBLN5"
                     /coded_by="XM_061159307.1:303..1688"
                     /db_xref="GeneID:133068178"
ORIGIN      
        1 mrprslepmk tgdcrqkrmi ltvtilalcl pspgnaqqqc tngfdldrss gqcldvdecr
       61 tipeacrgdm mcvnqnggyl ciprtnpvyr gpysnpysnp ysgsypaaap plsapnypti
      121 srplicrfgy qmdesnqcvd vdecatdshq cnptqicint eggytcsctd gywllegqcl
      181 didecrygyc qqlcanvpgs ysctcnpgft lnedgrscqd vnecatenpc vqtcvntygs
      241 ficrcdpgye leddgvhcsd mdecsfsefl cqhecvnqpg tyfcscpagy illddnrscq
      301 dinecehrnh tcilqqtcyn lqggfkcidp irceepylri sdnrcmcpae npgcrdqpft
      361 ilyrdmdvvs grsvpadifq mqattrypga yyifqiksgn egrefymrqt gpisatlvmt
      421 rpikgprdiq ldlemitvnt vinfrgssvi rlriyvsqyp f
//
LOCUS       XP_061015291             448 aa            linear   MAM 02-DEC-2023
DEFINITION  fibulin-5 isoform X2 [Dama dama].
ACCESSION   XP_061015291
VERSION     XP_061015291.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159308.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..448
                     /product="fibulin-5 isoform X2"
                     /calculated_mol_wt=50034
     Region          127..158
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF domain; pfam07645"
                     /db_xref="CDD:429571"
     Region          175..205
                     /region_name="FXa_inhibition"
                     /note="Coagulation Factor Xa inhibitory site; pfam14670"
                     /db_xref="CDD:464251"
     Region          207..245
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(207,210,223)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          258..286
                     /region_name="FXa_inhibition"
                     /note="Coagulation Factor Xa inhibitory site; pfam14670"
                     /db_xref="CDD:464251"
     CDS             1..448
                     /gene="FBLN5"
                     /coded_by="XM_061159308.1:439..1785"
                     /db_xref="GeneID:133068178"
ORIGIN      
        1 mpgfkriltv tilalclpsp gnaqqqctng fdldrssgqc ldvdecrtip eacrgdmmcv
       61 nqnggylcip rtnpvyrgpy snpysnpysg sypaaappls apnyptisrp licrfgyqmd
      121 esnqcvdvde catdshqcnp tqicintegg ytcsctdgyw llegqcldid ecrygycqql
      181 canvpgsysc tcnpgftlne dgrscqdvne catenpcvqt cvntygsfic rcdpgyeled
      241 dgvhcsdmde csfseflcqh ecvnqpgtyf cscpagyill ddnrscqdin ecehrnhtci
      301 lqqtcynlqg gfkcidpirc eepylrisdn rcmcpaenpg crdqpftily rdmdvvsgrs
      361 vpadifqmqa ttrypgayyi fqiksgnegr efymrqtgpi satlvmtrpi kgprdiqldl
      421 emitvntvin frgssvirlr iyvsqypf
//
LOCUS       XP_061015293            1976 aa            linear   MAM 02-DEC-2023
DEFINITION  thyroid receptor-interacting protein 11 isoform X1 [Dama dama].
ACCESSION   XP_061015293
VERSION     XP_061015293.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159310.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1976
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1976
                     /product="thyroid receptor-interacting protein 11 isoform
                     X1"
                     /calculated_mol_wt=226820
     Region          227..1068
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          790..1749
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1976
                     /gene="TRIP11"
                     /coded_by="XM_061159310.1:415..6345"
                     /db_xref="GeneID:133068179"
ORIGIN      
        1 msswlgglgs glgqslgqvg gslasltgqi snftkdmlme gteeveadlp narrkeveai
       61 htilrsener lkklcadlee kheaselqik qqsmnyrhql qqkeveishl karqialqdq
      121 llklqsaaqs vnsgaggvpa ttasssfgyg lshhasgfhd ddmdfgdiis sqreinrlsn
      181 evsrlesevg hwrhiaqtsk aqgsdsadqs eicklqniik elkqnrsqei dnhqhemsvl
      241 qnahqqklae itrrhreels dyedrieele nllqqggpgv avtdhsktqe mqktvqvlqa
      301 ekvestkkie elenkikdis kklssaendr dvlrreqerl nvenrqilee ceslklecsk
      361 lqpysakqsd tmtekermpq slsveevfrl qqalsdaene ikrlsnlnqd nnlaednlkl
      421 kmhvqvleke nsllnqekee lhmslsklnn eyevvkstaa rdvdldselc dlrrnleake
      481 qelnqiitek eiliaeleel dkqnqeatkh milikdqlsk qqnegdniis klkkdlndek
      541 trvhqleddk mdltreldvq kekliqselv lndlhlskqk ledkvddlvd qlnkshtqnl
      601 siqkenfelq ehikqkeeel srvrdeltqs lnqdsdinfk dnllkereae vrnlkqnlse
      661 ierlnenlkk vafdlkvene klnlacedvr hqleeslagn sliaveknai vealklekeq
      721 leaelrqaek rlleeaskye qtieelshar hlstsalqld herliklnqe kdfeitelkk
      781 nieqmatdhk etkkilsssl eeqkqltqlv nekesfiekl kersselqee lnkytqalrk
      841 neilrqtiee kdrslgsmke enshlkeele rlreqqsraa paaepktlds vrelgpevsq
      901 lsvvkgnlee eikqhrkvie dqnqskiqll qslqeqkkem defrhqheqm ntthtqlfle
      961 kdeqiknlqk tieqiktqlh eersdiqten sdifqetkvr glniengsek hdlskaeter
     1021 lvkgikerel eikllnekni fltkqidqls kdevgkltqi iqqkdleiqa lharisstsy
     1081 pqdvvylqqq lqayamereq vlavlsektr enshlkteyh kmmdivaake aalnklqden
     1141 kklftrfess gqdmfretiq nlsriirekd ieidalsqkc qtlltvlqas nsgnevggvn
     1201 snqfeellqe rdklkqqvkk meewkqqvmt tvqnmqhesa qlqeelhqlq aqvlvdsnns
     1261 sklqvdytgl iqsyeqnetk lknfgqelaq vqhsigqlcn tkdlllgkld iispqlspes
     1321 stasqtaesv riiksdvsse sskqeieelr rslqekdati rtlqennhrl sdsiaassel
     1381 erkeheqtds eikllkekqe slqkslkekd llikaksdql lslnenftnk vnenellrqa
     1441 vtnlkertli lemdicklkg enekiietsr gketeyqalq etnmkfsmml rekefechsl
     1501 kekalafeql lkekeqgktg elnqllnavk smqektvmfq qerdqvmlal kqkqmentav
     1561 qnevqhlrdk elrlnqeler lrnhllesed sytrealaae dreaklrkkv tileeklvss
     1621 ssamenashq anlqveslqe qlnvvskqrd etalqlslsq eqvkqyalsl snlqmvlehf
     1681 qqeekamysa elekhkqlva ewkkkaenle gklvslqerl deanaaldsa srlteqldlk
     1741 eeqieelkkq nelqqemldd vqkklmnlvn stegkvdkvl mrnlftghfh tpkhqrhevl
     1801 rlmgsilgik keemdqllte dqggvtrwmt gwlgggsksv pstplrpsqq sllnssfsel
     1861 fvkfletesh psvpppklsv hdmkpldspg rrkldtstpe sfkdtaesra grrtdvnpfl
     1921 aprsaavpli npaglgpggp ghlllkpisd vlptftplpv spdnsagvvl kdllkq
//
LOCUS       XP_061015294            1975 aa            linear   MAM 02-DEC-2023
DEFINITION  thyroid receptor-interacting protein 11 isoform X2 [Dama dama].
ACCESSION   XP_061015294
VERSION     XP_061015294.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159311.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1975
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1975
                     /product="thyroid receptor-interacting protein 11 isoform
                     X2"
                     /calculated_mol_wt=226749
     Region          226..1067
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          789..1748
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1975
                     /gene="TRIP11"
                     /coded_by="XM_061159311.1:415..6342"
                     /db_xref="GeneID:133068179"
ORIGIN      
        1 msswlgglgs glgqslgqvg gslasltgqi snftkdmlme gteevedlpn arrkeveaih
       61 tilrsenerl kklcadleek heaselqikq qsmnyrhqlq qkeveishlk arqialqdql
      121 lklqsaaqsv nsgaggvpat tasssfgygl shhasgfhdd dmdfgdiiss qreinrlsne
      181 vsrlesevgh wrhiaqtska qgsdsadqse icklqniike lkqnrsqeid nhqhemsvlq
      241 nahqqklaei trrhreelsd yedrieelen llqqggpgva vtdhsktqem qktvqvlqae
      301 kvestkkiee lenkikdisk klssaendrd vlrreqerln venrqileec eslklecskl
      361 qpysakqsdt mtekermpqs lsveevfrlq qalsdaenei krlsnlnqdn nlaednlklk
      421 mhvqvleken sllnqekeel hmslsklnne yevvkstaar dvdldselcd lrrnleakeq
      481 elnqiiteke iliaeleeld kqnqeatkhm ilikdqlskq qnegdniisk lkkdlndekt
      541 rvhqleddkm dltreldvqk ekliqselvl ndlhlskqkl edkvddlvdq lnkshtqnls
      601 iqkenfelqe hikqkeeels rvrdeltqsl nqdsdinfkd nllkereaev rnlkqnlsei
      661 erlnenlkkv afdlkvenek lnlacedvrh qleeslagns liaveknaiv ealklekeql
      721 eaelrqaekr lleeaskyeq tieelsharh lstsalqldh erliklnqek dfeitelkkn
      781 ieqmatdhke tkkilsssle eqkqltqlvn ekesfieklk ersselqeel nkytqalrkn
      841 eilrqtieek drslgsmkee nshlkeeler lreqqsraap aaepktldsv relgpevsql
      901 svvkgnleee ikqhrkvied qnqskiqllq slqeqkkemd efrhqheqmn tthtqlflek
      961 deqiknlqkt ieqiktqlhe ersdiqtens difqetkvrg lniengsekh dlskaeterl
     1021 vkgikerele ikllneknif ltkqidqlsk devgkltqii qqkdleiqal harisstsyp
     1081 qdvvylqqql qayamereqv lavlsektre nshlkteyhk mmdivaakea alnklqdenk
     1141 klftrfessg qdmfretiqn lsriirekdi eidalsqkcq tlltvlqasn sgnevggvns
     1201 nqfeellqer dklkqqvkkm eewkqqvmtt vqnmqhesaq lqeelhqlqa qvlvdsnnss
     1261 klqvdytgli qsyeqnetkl knfgqelaqv qhsigqlcnt kdlllgkldi ispqlspess
     1321 tasqtaesvr iiksdvsses skqeieelrr slqekdatir tlqennhrls dsiaassele
     1381 rkeheqtdse ikllkekqes lqkslkekdl likaksdqll slnenftnkv nenellrqav
     1441 tnlkertlil emdicklkge nekiietsrg keteyqalqe tnmkfsmmlr ekefechslk
     1501 ekalafeqll kekeqgktge lnqllnavks mqektvmfqq erdqvmlalk qkqmentavq
     1561 nevqhlrdke lrlnqelerl rnhlleseds ytrealaaed reaklrkkvt ileeklvsss
     1621 samenashqa nlqveslqeq lnvvskqrde talqlslsqe qvkqyalsls nlqmvlehfq
     1681 qeekamysae lekhkqlvae wkkkaenleg klvslqerld eanaaldsas rlteqldlke
     1741 eqieelkkqn elqqemlddv qkklmnlvns tegkvdkvlm rnlftghfht pkhqrhevlr
     1801 lmgsilgikk eemdqllted qggvtrwmtg wlgggsksvp stplrpsqqs llnssfself
     1861 vkfleteshp svpppklsvh dmkpldspgr rkldtstpes fkdtaesrag rrtdvnpfla
     1921 prsaavplin paglgpggpg hlllkpisdv lptftplpvs pdnsagvvlk dllkq
//
LOCUS       XP_061015295            1883 aa            linear   MAM 02-DEC-2023
DEFINITION  thyroid receptor-interacting protein 11 isoform X3 [Dama dama].
ACCESSION   XP_061015295
VERSION     XP_061015295.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159312.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1883
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1883
                     /product="thyroid receptor-interacting protein 11 isoform
                     X3"
                     /calculated_mol_wt=216726
     Region          134..975
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          697..1656
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1883
                     /gene="TRIP11"
                     /coded_by="XM_061159312.1:219..5870"
                     /db_xref="GeneID:133068179"
ORIGIN      
        1 mnyrhqlqqk eveishlkar qialqdqllk lqsaaqsvns gaggvpatta sssfgyglsh
       61 hasgfhdddm dfgdiissqr einrlsnevs rlesevghwr hiaqtskaqg sdsadqseic
      121 klqniikelk qnrsqeidnh qhemsvlqna hqqklaeitr rhreelsdye drieelenll
      181 qqggpgvavt dhsktqemqk tvqvlqaekv estkkieele nkikdiskkl ssaendrdvl
      241 rreqerlnve nrqileeces lklecsklqp ysakqsdtmt ekermpqsls veevfrlqqa
      301 lsdaeneikr lsnlnqdnnl aednlklkmh vqvlekensl lnqekeelhm slsklnneye
      361 vvkstaardv dldselcdlr rnleakeqel nqiitekeil iaeleeldkq nqeatkhmil
      421 ikdqlskqqn egdniisklk kdlndektrv hqleddkmdl treldvqkek liqselvlnd
      481 lhlskqkled kvddlvdqln kshtqnlsiq kenfelqehi kqkeeelsrv rdeltqslnq
      541 dsdinfkdnl lkereaevrn lkqnlseier lnenlkkvaf dlkvenekln lacedvrhql
      601 eeslagnsli aveknaivea lklekeqlea elrqaekrll eeaskyeqti eelsharhls
      661 tsalqldher liklnqekdf eitelkknie qmatdhketk kilsssleeq kqltqlvnek
      721 esfieklker sselqeelnk ytqalrknei lrqtieekdr slgsmkeens hlkeelerlr
      781 eqqsraapaa epktldsvre lgpevsqlsv vkgnleeeik qhrkviedqn qskiqllqsl
      841 qeqkkemdef rhqheqmntt htqlflekde qiknlqktie qiktqlheer sdiqtensdi
      901 fqetkvrgln iengsekhdl skaeterlvk gikereleik llnekniflt kqidqlskde
      961 vgkltqiiqq kdleiqalha risstsypqd vvylqqqlqa yamereqvla vlsektrens
     1021 hlkteyhkmm divaakeaal nklqdenkkl ftrfessgqd mfretiqnls riirekdiei
     1081 dalsqkcqtl ltvlqasnsg nevggvnsnq feellqerdk lkqqvkkmee wkqqvmttvq
     1141 nmqhesaqlq eelhqlqaqv lvdsnnsskl qvdytgliqs yeqnetklkn fgqelaqvqh
     1201 sigqlcntkd lllgkldiis pqlspessta sqtaesvrii ksdvssessk qeieelrrsl
     1261 qekdatirtl qennhrlsds iaasselerk eheqtdseik llkekqeslq kslkekdlli
     1321 kaksdqllsl nenftnkvne nellrqavtn lkertlilem dicklkgene kiietsrgke
     1381 teyqalqetn mkfsmmlrek efechslkek alafeqllke keqgktgeln qllnavksmq
     1441 ektvmfqqer dqvmlalkqk qmentavqne vqhlrdkelr lnqelerlrn hllesedsyt
     1501 realaaedre aklrkkvtil eeklvssssa menashqanl qveslqeqln vvskqrdeta
     1561 lqlslsqeqv kqyalslsnl qmvlehfqqe ekamysaele khkqlvaewk kkaenlegkl
     1621 vslqerldea naaldsasrl teqldlkeeq ieelkkqnel qqemlddvqk klmnlvnste
     1681 gkvdkvlmrn lftghfhtpk hqrhevlrlm gsilgikkee mdqlltedqg gvtrwmtgwl
     1741 gggsksvpst plrpsqqsll nssfselfvk fleteshpsv pppklsvhdm kpldspgrrk
     1801 ldtstpesfk dtaesragrr tdvnpflapr saavplinpa glgpggpghl llkpisdvlp
     1861 tftplpvspd nsagvvlkdl lkq
//
LOCUS       XP_061015296             373 aa            linear   MAM 02-DEC-2023
DEFINITION  ataxin-3 isoform X1 [Dama dama].
ACCESSION   XP_061015296
VERSION     XP_061015296.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159313.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..373
                     /product="ataxin-3 isoform X1"
                     /calculated_mol_wt=42342
     Region          9..163
                     /region_name="Josephin"
                     /note="pfam02099"
                     /db_xref="CDD:460444"
     Region          263..320
                     /region_name="SUIM_assoc"
                     /note="Unstructured region C-term to UIM in Ataxin3;
                     pfam16619"
                     /db_xref="CDD:465203"
     CDS             1..373
                     /gene="ATXN3"
                     /coded_by="XM_061159313.1:59..1180"
                     /db_xref="GeneID:133068182"
ORIGIN      
        1 mesifhekqe gslcaqhcln nllqgeyfsp velssiahql deeermrmae ggvtsedyrt
       61 flqqpsgnmd dsgffsiqvi snalkvwgle lilfnspeyq rlridpiner sficnykehw
      121 ftvrklgkqw fnlnslltgp elisdtylal flaqlqqegy sifvvkgdlp dceadqllqm
      181 irvqqmhrpk ligeelaqlk eqrvqktdle rvlevndgtg mldedeedfq ralalsrqei
      241 dmedeeadlr raiqlsmqgt srnrcqdipq tsgshptsee lrkkreayfe kqqqqqqapp
      301 gqlthlceks stsseapdsd lgdsmseedm lqaavtmsle tvrsnlkteg kkctvavpfa
      361 qdqlcspcac spl
//
LOCUS       XP_061015297             301 aa            linear   MAM 02-DEC-2023
DEFINITION  ataxin-3 isoform X2 [Dama dama].
ACCESSION   XP_061015297
VERSION     XP_061015297.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159314.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..301
                     /product="ataxin-3 isoform X2"
                     /calculated_mol_wt=34793
     Region          9..163
                     /region_name="Josephin"
                     /note="pfam02099"
                     /db_xref="CDD:460444"
     Region          263..>292
                     /region_name="SUIM_assoc"
                     /note="Unstructured region C-term to UIM in Ataxin3;
                     pfam16619"
                     /db_xref="CDD:465203"
     CDS             1..301
                     /gene="ATXN3"
                     /coded_by="XM_061159314.1:59..964"
                     /db_xref="GeneID:133068182"
ORIGIN      
        1 mesifhekqe gslcaqhcln nllqgeyfsp velssiahql deeermrmae ggvtsedyrt
       61 flqqpsgnmd dsgffsiqvi snalkvwgle lilfnspeyq rlridpiner sficnykehw
      121 ftvrklgkqw fnlnslltgp elisdtylal flaqlqqegy sifvvkgdlp dceadqllqm
      181 irvqqmhrpk ligeelaqlk eqrvqktdle rvlevndgtg mldedeedfq ralalsrqei
      241 dmedeeadlr raiqlsmqgt srnrcqdipq tsgshptsee lrkkreayfe nhnsevyegk
      301 f
//
LOCUS       XP_061015298             168 aa            linear   MAM 02-DEC-2023
DEFINITION  ataxin-3 isoform X3 [Dama dama].
ACCESSION   XP_061015298
VERSION     XP_061015298.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159315.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..168
                     /product="ataxin-3 isoform X3"
                     /calculated_mol_wt=19403
     Region          9..158
                     /region_name="Josephin"
                     /note="pfam02099"
                     /db_xref="CDD:460444"
     CDS             1..168
                     /gene="ATXN3"
                     /coded_by="XM_061159315.1:59..565"
                     /db_xref="GeneID:133068182"
ORIGIN      
        1 mesifhekqe gslcaqhcln nllqgeyfsp velssiahql deeermrmae ggvtsedyrt
       61 flqqpsgnmd dsgffsiqvi snalkvwgle lilfnspeyq rlridpiner sficnykehw
      121 ftvrklgkqw fnlnslltgp elisdtylal flaqlqqeeh rpqgtwaq
//
LOCUS       XP_061015299             782 aa            linear   MAM 02-DEC-2023
DEFINITION  cleavage and polyadenylation specificity factor subunit 2 [Dama
            dama].
ACCESSION   XP_061015299
VERSION     XP_061015299.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159316.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..782
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..782
                     /product="cleavage and polyadenylation specificity factor
                     subunit 2"
                     /calculated_mol_wt=88286
     Region          7..204
                     /region_name="CPSF2-like_MBL-fold"
                     /note="cleavage and polyadenylation specificity factor
                     (CPSF) subunit 2 and related proteins; MBL-fold
                     metallo-hydrolase domain; cd16293"
                     /db_xref="CDD:293851"
     Site            order(16,62,64,66..67,153,175)
                     /site_type="active"
                     /db_xref="CDD:293851"
     Site            order(134..136,145,161,163,169,192)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:293851"
     Region          243..368
                     /region_name="Beta-Casp"
                     /note="Beta-Casp domain; smart01027"
                     /db_xref="CDD:214983"
     Region          528..591
                     /region_name="RMMBL"
                     /note="Zn-dependent metallo-hydrolase RNA specificity
                     domain; pfam07521"
                     /db_xref="CDD:462191"
     Region          608..779
                     /region_name="CPSF100_C"
                     /note="Cleavage and polyadenylation factor 2 C-terminal;
                     pfam13299"
                     /db_xref="CDD:463836"
     CDS             1..782
                     /gene="CPSF2"
                     /coded_by="XM_061159316.1:769..3117"
                     /db_xref="GeneID:133068183"
ORIGIN      
        1 mtsiiklttl sgvqeesalc yllqvdefrf lldcgwdehf smdiidslrk hvhqidavll
       61 shpdplhlga lpyavgklgl ncaiyatipv ykmgqmfmyd lyqsrhnted ftlftlddvd
      121 aafdkiqqlk fsqivnlkgk ghglsitplp aghmiggtiw kivkdgeeei vyavdfnhkr
      181 eihlngcsle mlsrpsllit dsfnatyvqp rrkqrdeqll tnvletlrgd gnvliavdta
      241 grvlelaqll dqiwrtkdag lgvyslalln nvsynvvefs ksqvewmsdk lmrcfedkrn
      301 npfqfrhlsl chglsdlarv pspkvvlasq pdlecgfsrd lfiqwcqdpk nsiiltyrtt
      361 pgtlarflid npsekvteie lrkrvklegk eleeylekek lkkeaakkle qskeadidss
      421 desdaeedid qpsahktkhd lmmkgegsrk gsffkqakks ypmfpapeer ikwdeygeii
      481 kpedflvpel qateeekskl esgltngdep mdqdlsdvpt kcisttesie ikarvtyidy
      541 egrsdgdsik kiinqmkprq liivhgppea sqdlaeccra fggkdikvym pklhetvdat
      601 sethiyqvrl kdslvsslqf ckakdaelaw idgvldmrvs kvdtgvilee gelkddgeds
      661 emqvdapsds sviaqqkamk slfgddeket geeseiiptl eplpphevpg hqsvfmnepr
      721 lsdfkqvllr egiqaefvgg vlvcnnqvav rrtetgrigl egclcqdfyr irdllyeqya
      781 iv
//
LOCUS       XP_061015300             782 aa            linear   MAM 02-DEC-2023
DEFINITION  cleavage and polyadenylation specificity factor subunit 2 [Dama
            dama].
ACCESSION   XP_061015300
VERSION     XP_061015300.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159317.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..782
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..782
                     /product="cleavage and polyadenylation specificity factor
                     subunit 2"
                     /calculated_mol_wt=88286
     Region          7..204
                     /region_name="CPSF2-like_MBL-fold"
                     /note="cleavage and polyadenylation specificity factor
                     (CPSF) subunit 2 and related proteins; MBL-fold
                     metallo-hydrolase domain; cd16293"
                     /db_xref="CDD:293851"
     Site            order(16,62,64,66..67,153,175)
                     /site_type="active"
                     /db_xref="CDD:293851"
     Site            order(134..136,145,161,163,169,192)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:293851"
     Region          243..368
                     /region_name="Beta-Casp"
                     /note="Beta-Casp domain; smart01027"
                     /db_xref="CDD:214983"
     Region          528..591
                     /region_name="RMMBL"
                     /note="Zn-dependent metallo-hydrolase RNA specificity
                     domain; pfam07521"
                     /db_xref="CDD:462191"
     Region          608..779
                     /region_name="CPSF100_C"
                     /note="Cleavage and polyadenylation factor 2 C-terminal;
                     pfam13299"
                     /db_xref="CDD:463836"
     CDS             1..782
                     /gene="CPSF2"
                     /coded_by="XM_061159317.1:234..2582"
                     /db_xref="GeneID:133068183"
ORIGIN      
        1 mtsiiklttl sgvqeesalc yllqvdefrf lldcgwdehf smdiidslrk hvhqidavll
       61 shpdplhlga lpyavgklgl ncaiyatipv ykmgqmfmyd lyqsrhnted ftlftlddvd
      121 aafdkiqqlk fsqivnlkgk ghglsitplp aghmiggtiw kivkdgeeei vyavdfnhkr
      181 eihlngcsle mlsrpsllit dsfnatyvqp rrkqrdeqll tnvletlrgd gnvliavdta
      241 grvlelaqll dqiwrtkdag lgvyslalln nvsynvvefs ksqvewmsdk lmrcfedkrn
      301 npfqfrhlsl chglsdlarv pspkvvlasq pdlecgfsrd lfiqwcqdpk nsiiltyrtt
      361 pgtlarflid npsekvteie lrkrvklegk eleeylekek lkkeaakkle qskeadidss
      421 desdaeedid qpsahktkhd lmmkgegsrk gsffkqakks ypmfpapeer ikwdeygeii
      481 kpedflvpel qateeekskl esgltngdep mdqdlsdvpt kcisttesie ikarvtyidy
      541 egrsdgdsik kiinqmkprq liivhgppea sqdlaeccra fggkdikvym pklhetvdat
      601 sethiyqvrl kdslvsslqf ckakdaelaw idgvldmrvs kvdtgvilee gelkddgeds
      661 emqvdapsds sviaqqkamk slfgddeket geeseiiptl eplpphevpg hqsvfmnepr
      721 lsdfkqvllr egiqaefvgg vlvcnnqvav rrtetgrigl egclcqdfyr irdllyeqya
      781 iv
//
LOCUS       XP_061015301             212 aa            linear   MAM 02-DEC-2023
DEFINITION  high mobility group protein B1-like [Dama dama].
ACCESSION   XP_061015301
VERSION     XP_061015301.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159318.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..212
                     /product="high mobility group protein B1-like"
                     /calculated_mol_wt=24361
     Region          8..76
                     /region_name="HMG-box_HMGB_rpt1"
                     /note="first high mobility group (HMG)-box found in the
                     high mobility group protein B (HMGB) family; cd21978"
                     /db_xref="CDD:438794"
     Site            order(8..10,13,16..17,19..21,25,28,35..36,38..39,41..43,
                     45..46,50)
                     /site_type="other"
                     /note="p53 binding site [polypeptide binding]"
                     /db_xref="CDD:438794"
     Site            order(8,10..11,13..17,20..21,36,38..39,41..43,46,49)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438794"
     Region          93..162
                     /region_name="HMG-box_HMGB_rpt2"
                     /note="second high mobility group (HMG)-box found in the
                     high mobility group protein B (HMGB) family; cd21979"
                     /db_xref="CDD:438795"
     Site            order(94..100,102..104,106..107,110,122..123,125..127,130,
                     133,152,155..156,159,162)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438795"
     CDS             1..212
                     /gene="LOC133068186"
                     /coded_by="XM_061159318.1:94..732"
                     /db_xref="GeneID:133068186"
ORIGIN      
        1 mgkgdpkklr gktssyaffv qtcreehkkk hpdasvnfse fskkcserwk tmsakekgkf
       61 edmakadkar yeremktyip pkgetkkkfk dpnapkrpps afflfcseyr pkikgehpgl
      121 sigdvakklg emwnntaadd kqpyekkaak lkekyekdia ayqakgkpda akkgvvkaek
      181 skkkkeeeed eedeeeeede edeeeeeddd de
//
LOCUS       XP_061015302            1033 aa            linear   MAM 02-DEC-2023
DEFINITION  ras and Rab interactor 3 isoform X1 [Dama dama].
ACCESSION   XP_061015302
VERSION     XP_061015302.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159319.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1033
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1033
                     /product="ras and Rab interactor 3 isoform X1"
                     /calculated_mol_wt=111653
     Region          76..177
                     /region_name="SH2"
                     /note="Src homology 2 (SH2) domain; cl15255"
                     /db_xref="CDD:472789"
     Site            order(94,112,138,140)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198173"
     Site            order(139,166)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198173"
     Region          <364..596
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          789..892
                     /region_name="VPS9"
                     /note="Vacuolar sorting protein 9 (VPS9) domain;
                     pfam02204"
                     /db_xref="CDD:460489"
     Region          927..1014
                     /region_name="RA_Rin3"
                     /note="Ras-associating (RA) domain found in Ras and Rab
                     interactor 3 (Rin3); cd16130"
                     /db_xref="CDD:340547"
     CDS             1..1033
                     /gene="RIN3"
                     /coded_by="XM_061159319.1:16..3117"
                     /db_xref="GeneID:133068187"
ORIGIN      
        1 mrsfagrapp asrarrfacv ppassdagra wgrgpgsppi pdvgkgerqe keeedgtgpg
       61 lpgtpkncip rrdisvlekl vktcpvwlql glgraeaari lhreaagtfl vrrdsslkhl
      121 vlcvhfpslk esssevleyt ikeeksilyl egsvlvfedi frliafycvs rdllpftlrl
      181 praileasss tdleiisnlg lgfwdsslnp rrgggspaea prdpapgapp asslkstahp
      241 encsceiels igngrlwfvn pifiedcgra ppadqppags cpsrpvppts datsptsrwa
      301 prrpappppp lplhppgfsr pppaappapa splpssppaa alqppealpp sppasaphla
      361 phapgppelp sqppmtacer lprplagldp lreeemkpga aasplqapap pvptkkslpt
      421 vpprrrisek vsledqsagk pdrgaaaegg pggpsraspl rlppqrtsds pgdrpprtte
      481 pgqetsaqas npgsapeplr kirqapvppp rkkrvsrqla svlptpleta elsaageaae
      541 kptpgppgei qgpaspaggn qspraragar pqsapefkgs laslsdslgv pasaadqdsy
      601 stssteeele qfsspgmkkk psmilgkarh rlsfasfssv fnaflsnnrk lykkvvelaq
      661 dkgsyfgslv qdykvyslem mshqtsstem lqeirtmmtq lksyllqste lkalvdptlh
      721 seeeleaive salykcvlkp lkeaiysclh eihskdgslq qlkdnqlvil attttdlgvt
      781 tsvpevpvme kilqkfssmh kayspekkis illktckliy dsmalgnpgk pygaddflpv
      841 lmyvlarsnl temllnveym melmdpalql gegsyylttt ygalehikny dkitvtrqls
      901 vevqdsihrw errrtlnkar asrssvqdfi cvsylepeqq srtlasradt laealcaqca
      961 ekfevvqpqd yrlfvlvdgr cfqladealp hrikgyllrs epkrdfhfvy rpldggggsg
     1021 gppclvvrep nfl
//
LOCUS       XP_061015303            1010 aa            linear   MAM 02-DEC-2023
DEFINITION  ras and Rab interactor 3 isoform X2 [Dama dama].
ACCESSION   XP_061015303
VERSION     XP_061015303.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159320.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1010
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1010
                     /product="ras and Rab interactor 3 isoform X2"
                     /calculated_mol_wt=109336
     Region          53..154
                     /region_name="SH2"
                     /note="Src homology 2 (SH2) domain; cl15255"
                     /db_xref="CDD:472789"
     Site            order(71,89,115,117)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198173"
     Site            order(116,143)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198173"
     Region          <341..573
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          766..869
                     /region_name="VPS9"
                     /note="Vacuolar sorting protein 9 (VPS9) domain;
                     pfam02204"
                     /db_xref="CDD:460489"
     Region          904..991
                     /region_name="RA_Rin3"
                     /note="Ras-associating (RA) domain found in Ras and Rab
                     interactor 3 (Rin3); cd16130"
                     /db_xref="CDD:340547"
     CDS             1..1010
                     /gene="RIN3"
                     /coded_by="XM_061159320.1:269..3301"
                     /db_xref="GeneID:133068187"
ORIGIN      
        1 mirragaper adpvgpipdv gkgerqekee edgtgpglpg tpknciprrd isvleklvkt
       61 cpvwlqlglg raeaarilhr eaagtflvrr dsslkhlvlc vhfpslkess sevleytike
      121 eksilylegs vlvfedifrl iafycvsrdl lpftlrlpra ileassstdl eiisnlglgf
      181 wdsslnprrg ggspaeaprd papgappass lkstahpenc sceielsign grlwfvnpif
      241 iedcgrappa dqppagscps rpvpptsdat sptsrwaprr pappppplpl hppgfsrppp
      301 aappapaspl pssppaaalq ppealppspp asaphlapha pgppelpsqp pmtacerlpr
      361 plagldplre eemkpgaaas plqapappvp tkkslptvpp rrrisekvsl edqsagkpdr
      421 gaaaeggpgg psrasplrlp pqrtsdspgd rpprttepgq etsaqasnpg sapeplrkir
      481 qapvppprkk rvsrqlasvl ptpletaels aageaaekpt pgppgeiqgp aspaggnqsp
      541 raragarpqs apefkgslas lsdslgvpas aadqdsysts steeeleqfs spgmkkkpsm
      601 ilgkarhrls fasfssvfna flsnnrklyk kvvelaqdkg syfgslvqdy kvyslemmsh
      661 qtsstemlqe irtmmtqlks yllqstelka lvdptlhsee eleaivesal ykcvlkplke
      721 aiysclheih skdgslqqlk dnqlvilatt ttdlgvttsv pevpvmekil qkfssmhkay
      781 spekkisill ktckliydsm algnpgkpyg addflpvlmy vlarsnltem llnveymmel
      841 mdpalqlgeg syyltttyga lehiknydki tvtrqlsvev qdsihrwerr rtlnkarasr
      901 ssvqdficvs ylepeqqsrt lasradtlae alcaqcaekf evvqpqdyrl fvlvdgrcfq
      961 ladealphri kgyllrsepk rdfhfvyrpl dggggsggpp clvvrepnfl
//
LOCUS       XP_061015304             433 aa            linear   MAM 02-DEC-2023
DEFINITION  legumain [Dama dama].
ACCESSION   XP_061015304
VERSION     XP_061015304.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159321.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..433
                     /product="legumain"
                     /calculated_mol_wt=49063
     Region          29..285
                     /region_name="Peptidase_C13"
                     /note="Peptidase C13 family; pfam01650"
                     /db_xref="CDD:396290"
     Region          309..429
                     /region_name="legumain_C"
                     /note="C-terminal prodomain of legumain; cd21115"
                     /db_xref="CDD:411051"
     Site            order(310..311,313..315,317..318,321,370,376..377,
                     379..380,383,387,393,399,402..403,405..406)
                     /site_type="other"
                     /note="catalytic domain interface [polypeptide binding]"
                     /db_xref="CDD:411051"
     CDS             1..433
                     /gene="LGMN"
                     /coded_by="XM_061159321.1:177..1478"
                     /db_xref="GeneID:133068188"
ORIGIN      
        1 miwevtvlls lvlglgavpl ddpedggkhw vvivagsngw ynyrhqadac hayqivhrng
       61 ipdeqiivmm yddiansedn ptpgivinrp ngsdvyqgvp kdytgedvtp knflavlrgd
      121 aeavkgvgsg kvlksgprdh vfvyftdhga tgilvfpned lhvkdlneti rymyehkmyq
      181 kmvfyieace sgsmmnhlpp dinvyattaa npressyacy ydeqrstylg dwysvnwmed
      241 sdvedltket lhkqyqlvks htntshvmqy gnksisamkl mqfqgmkhka sspislppvs
      301 rldltpspev pltimkrklm ssndlqesrr lvqkidrhle arniieksvr kivtlvsgsa
      361 aevdrllsqr apltehacyq tavshfrshc fnwhnptyey alrhlyvlvn lcenpypidr
      421 iklsmnkvcl gyc
//
LOCUS       XP_061015305             732 aa            linear   MAM 02-DEC-2023
DEFINITION  golgin subfamily A member 5 isoform X1 [Dama dama].
ACCESSION   XP_061015305
VERSION     XP_061015305.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159322.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..732
                     /product="golgin subfamily A member 5 isoform X1"
                     /calculated_mol_wt=82644
     Region          <229..>537
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          421..725
                     /region_name="Golgin_A5"
                     /note="Golgin subfamily A member 5; pfam09787"
                     /db_xref="CDD:462900"
     CDS             1..732
                     /gene="GOLGA5"
                     /coded_by="XM_061159322.1:200..2398"
                     /db_xref="GeneID:133068189"
ORIGIN      
        1 mswfadlagk aedllnrvdq gaatalsrke ntsniiyskn tdyselhqqd tdltyqtgsk
       61 ttyissaadn irnqkatila gtanvkvgsr tlgetshpve nasaprpssq fvrrkksepd
      121 dellfdflns sqkeptgkve ikkeraktpv lqssrttsvs svntsvttvk tveenpsgsq
      181 shaashdsds gheaheessk envlsnaact dpnpvpnddg kshelsnlrl enqllrnevq
      241 nlnqemasll qrsketqeel nkararvekw nvdhsktdri trelraqvdd lteavaakds
      301 qlavlkvrlq eadqllntrt ealealqsek sriiqdhseg sslqnqalqt lqerlheada
      361 tlkreqesyk qmqsefatrl nkmeverqnl aeavtlaerk hsdekkrvde lqqqvkvlks
      421 nldsskqela dykqkatril qskeklinsl kegsgfegld sstansvele elrheketqr
      481 eeiqklmgqi hqlrselqdi eaqqvseaes areqlqdlqd qiagqraakq eleaeldrqk
      541 qefryieedl yrtkntlqsr ikdredeiqk lrnqltnktl snssqselen rlhqltetli
      601 qkqtmlesls teknslvfql erleqqinsa agsssngssi nmagvdsgeg trlrnvpvlf
      661 ndtetnlagm ygkvrkaass idqfsirlgi flrrypiarv fviiymallh lwvmivllty
      721 tpemhhdqpr gr
//
LOCUS       XP_061015306             731 aa            linear   MAM 02-DEC-2023
DEFINITION  golgin subfamily A member 5 isoform X2 [Dama dama].
ACCESSION   XP_061015306
VERSION     XP_061015306.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159323.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..731
                     /product="golgin subfamily A member 5 isoform X2"
                     /calculated_mol_wt=82573
     Region          <228..>536
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          420..724
                     /region_name="Golgin_A5"
                     /note="Golgin subfamily A member 5; pfam09787"
                     /db_xref="CDD:462900"
     CDS             1..731
                     /gene="GOLGA5"
                     /coded_by="XM_061159323.1:196..2391"
                     /db_xref="GeneID:133068189"
ORIGIN      
        1 mswfadlagk aedllnrvdq gaatalsrke ntsniiyskn tdyselhqqd tdltyqtgsk
       61 ttyissaadn irnqkatila gtanvkvgsr tlgetshpve nasaprpssq fvrrkksepd
      121 dellfdflns sqkeptgkve ikkeraktpv lqssrttsvs svntsvttvk tveenpsgsq
      181 shashdsdsg heaheesske nvlsnaactd pnpvpnddgk shelsnlrle nqllrnevqn
      241 lnqemasllq rsketqeeln kararvekwn vdhsktdrit relraqvddl teavaakdsq
      301 lavlkvrlqe adqllntrte alealqseks riiqdhsegs slqnqalqtl qerlheadat
      361 lkreqesykq mqsefatrln kmeverqnla eavtlaerkh sdekkrvdel qqqvkvlksn
      421 ldsskqelad ykqkatrilq skeklinslk egsgfeglds stansvelee lrheketqre
      481 eiqklmgqih qlrselqdie aqqvseaesa reqlqdlqdq iagqraakqe leaeldrqkq
      541 efryieedly rtkntlqsri kdredeiqkl rnqltnktls nssqselenr lhqltetliq
      601 kqtmleslst eknslvfqle rleqqinsaa gsssngssin magvdsgegt rlrnvpvlfn
      661 dtetnlagmy gkvrkaassi dqfsirlgif lrrypiarvf viiymallhl wvmivlltyt
      721 pemhhdqprg r
//
LOCUS       XP_061015307             452 aa            linear   MAM 02-DEC-2023
DEFINITION  chromogranin-A [Dama dama].
ACCESSION   XP_061015307
VERSION     XP_061015307.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159324.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..452
                     /product="chromogranin-A"
                     /calculated_mol_wt=49786
     Region          25..452
                     /region_name="Granin"
                     /note="Granin (chromogranin or secretogranin); pfam01271"
                     /db_xref="CDD:279595"
     CDS             1..452
                     /gene="CHGA"
                     /coded_by="XM_061159324.1:190..1548"
                     /db_xref="GeneID:133068190"
ORIGIN      
        1 mrsaavlall lcagqvialp vnspmnkgdt evmkcivevi sdtlskpspm pvskecfetl
       61 rgderilsil rhqnllkelq dlalqgaker thqqkqhssy eaelsevlek pndqaepkeg
      121 teevsskdaa ekrddskeve ksdedsdgdr pqaspelgpg skveednqap geeeeapsnt
      181 hpqaslpnpk hpgpqaeeds egpsqgpasr ekglsaeqgr qaereeeqee kgeeaeagea
      241 vpeeesppta afkphpnlgg kemqraapgw pealavdgag ktgaeetkpp egkgerahsr
      301 qeeeemagap qglfrggksr epeqeeqlsk ewedakrwsk mdqlakelta ekrlegeeee
      361 edpdrsmrls fraqgygfrg pglqlrrgwr psfredsvea glplqvrgyp eekkeeegsa
      421 nrrpedqele slsaieaele kvahqlqelr rg
//
LOCUS       XP_061015308             458 aa            linear   MAM 02-DEC-2023
DEFINITION  inositol-tetrakisphosphate 1-kinase isoform X1 [Dama dama].
ACCESSION   XP_061015308
VERSION     XP_061015308.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159325.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..458
                     /product="inositol-tetrakisphosphate 1-kinase isoform X1"
                     /calculated_mol_wt=49654
     Region          9..100
                     /region_name="Ins134_P3_kin_N"
                     /note="Inositol 1,3,4-trisphosphate 5/6-kinase
                     pre-ATP-grasp domain; pfam17927"
                     /db_xref="CDD:407776"
     Region          119..360
                     /region_name="CPSase_L_D2"
                     /note="Carbamoyl-phosphate synthase L chain, ATP binding
                     domain; cl17255"
                     /db_xref="CDD:473076"
     CDS             1..458
                     /gene="ITPK1"
                     /coded_by="XM_061159325.1:129..1505"
                     /db_xref="GeneID:133068191"
ORIGIN      
        1 mqtflkgkrv gywlsekkik klnfqafael crkrgievvq lnlsrpieeq gpldviihkl
       61 tdvileadqn dsqslelvhr fqeyidahpe tivldplpai rtlldrsksy elirkieaym
      121 kddricsppf meltslcgdd tmrlleengl afpficktrv ahgtnshema ivfnqeglsa
      181 iqppcvvqnf inhnavlykv fvvgesytvv qrpslknfsa gtsgsspgps lvppvwtgsg
      241 rsgrrtvght gaarglrapl agkkpdresi ffnshnvskp esssvltald kiegvferps
      301 devirelsra lrqalgvslf gidiiinnqt gqhavidina fpgyegvsef ftdllnhias
      361 vlqgqsagaa gtgdvaplrh srllaeqagg laaertcsas pgccssmmgq eppwtpeadv
      421 gagntaklph qrlgctaavs psfqqhcvas latkassq
//
LOCUS       XP_061015309             416 aa            linear   MAM 02-DEC-2023
DEFINITION  inositol-tetrakisphosphate 1-kinase isoform X2 [Dama dama].
ACCESSION   XP_061015309
VERSION     XP_061015309.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159326.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..416
                     /product="inositol-tetrakisphosphate 1-kinase isoform X2"
                     /calculated_mol_wt=45537
     Region          9..100
                     /region_name="Ins134_P3_kin_N"
                     /note="Inositol 1,3,4-trisphosphate 5/6-kinase
                     pre-ATP-grasp domain; pfam17927"
                     /db_xref="CDD:407776"
     Region          119..318
                     /region_name="Ins134_P3_kin"
                     /note="Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp
                     domain; pfam05770"
                     /db_xref="CDD:368606"
     CDS             1..416
                     /gene="ITPK1"
                     /coded_by="XM_061159326.1:128..1378"
                     /db_xref="GeneID:133068191"
ORIGIN      
        1 mqtflkgkrv gywlsekkik klnfqafael crkrgievvq lnlsrpieeq gpldviihkl
       61 tdvileadqn dsqslelvhr fqeyidahpe tivldplpai rtlldrsksy elirkieaym
      121 kddricsppf meltslcgdd tmrlleengl afpficktrv ahgtnshema ivfnqeglsa
      181 iqppcvvqnf inhnavlykv fvvgesytvv qrpslknfsa gtsdresiff nshnvskpes
      241 ssvltaldki egvferpsde virelsralr qalgvslfgi diiinnqtgq havidinafp
      301 gyegvsefft dllnhiasvl qgqsagaagt gdvaplrhsr llaeqaggla aertcsaspg
      361 ccssmmgqep pwtpeadvga gntaklphqr lgctaavsps fqqhcvasla tkassq
//
LOCUS       XP_061015310             163 aa            linear   MAM 02-DEC-2023
DEFINITION  lysosomal enzyme trafficking factor isoform X1 [Dama dama].
ACCESSION   XP_061015310
VERSION     XP_061015310.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159327.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..163
                     /product="lysosomal enzyme trafficking factor isoform X1"
                     /calculated_mol_wt=18794
     Region          34..161
                     /region_name="TMEM251"
                     /note="Transmembrane protein 251; pfam15190"
                     /db_xref="CDD:464554"
     CDS             1..163
                     /gene="LYSET"
                     /coded_by="XM_061159327.1:359..850"
                     /db_xref="GeneID:133068192"
ORIGIN      
        1 mpkqpdysel sdsltlavgt grfsgplhra wrmmnfrqrm gwigvglyll asaaafyyvf
       61 einetynrla lehiqqhpee plegttwths lktrllslpf wfwtivflip ylqmflflys
      121 ctradpktvg yciipiclav icnrhqafvk asnqisrlql idt
//
LOCUS       XP_061015311             131 aa            linear   MAM 02-DEC-2023
DEFINITION  lysosomal enzyme trafficking factor isoform X2 [Dama dama].
ACCESSION   XP_061015311
VERSION     XP_061015311.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159328.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..131
                     /product="lysosomal enzyme trafficking factor isoform X2"
                     /calculated_mol_wt=15238
     Region          2..129
                     /region_name="TMEM251"
                     /note="Transmembrane protein 251; pfam15190"
                     /db_xref="CDD:464554"
     CDS             1..131
                     /gene="LYSET"
                     /coded_by="XM_061159328.1:74..469"
                     /db_xref="GeneID:133068192"
ORIGIN      
        1 mmnfrqrmgw igvglyllas aaafyyvfei netynrlale hiqqhpeepl egttwthslk
       61 trllslpfwf wtivflipyl qmflflysct radpktvgyc iipiclavic nrhqafvkas
      121 nqisrlqlid t
//
LOCUS       XP_061015312             100 aa            linear   MAM 02-DEC-2023
DEFINITION  EKC/KEOPS complex subunit GON7 [Dama dama].
ACCESSION   XP_061015312
VERSION     XP_061015312.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159329.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..100
                     /product="EKC/KEOPS complex subunit GON7"
                     /calculated_mol_wt=10815
     Region          3..98
                     /region_name="DUF4611"
                     /note="Domain of unknown function (DUF4611); pfam15387"
                     /db_xref="CDD:464694"
     CDS             1..100
                     /gene="GON7"
                     /coded_by="XM_061159329.1:60..362"
                     /db_xref="GeneID:133068195"
ORIGIN      
        1 mellgeyigl egqrqrlrvp ceapgvtdpf qsllsgvaqm relvtelfgs qvqqeaqdrv
       61 aaapdealdg ddeddseden ntdnrtnsdg psakrqktpp
//
LOCUS       XP_061015313             425 aa            linear   MAM 02-DEC-2023
DEFINITION  putative E3 ubiquitin-protein ligase UBR7 [Dama dama].
ACCESSION   XP_061015313
VERSION     XP_061015313.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159330.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..425
                     /product="putative E3 ubiquitin-protein ligase UBR7"
                     /calculated_mol_wt=48055
     Region          45..115
                     /region_name="UBR-box_UBR7"
                     /note="UBR-box found in RING-type E3 ubiquitin-protein
                     ligase UBR7 and similar proteins; cd19677"
                     /db_xref="CDD:439075"
     Site            order(61,64,75,78,82..83,86,99,101,111)
                     /site_type="other"
                     /note="putative Zn binding site [ion binding]"
                     /db_xref="CDD:439075"
     Region          134..185
                     /region_name="PHD_UBR7"
                     /note="PHD finger found in putative E3 ubiquitin-protein
                     ligase UBR7; cd15542"
                     /db_xref="CDD:277017"
     Site            order(134,151..155,159,180)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277017"
     CDS             1..425
                     /gene="UBR7"
                     /coded_by="XM_061159330.1:60..1337"
                     /db_xref="GeneID:133068196"
ORIGIN      
        1 magaeepagr qselepvvsl vdvleedeel eneacavlgg sdsekcsysq gsvkrqalya
       61 cstctpegee pagiclacsy echgshklfe lytkrnfrcd cgnskfknle cklfpdkaki
      121 nsgnkyndnf fglycvckrp ypdpedeipd emiqcivced wfhgrhlgai ppesgdfqem
      181 vcqacmkrcp flwayaaqla vtkvtteddg lvlnvdgvgd qevittengt hqdnalgedv
      241 pehgkaimke vkaeqtnepc tssssesdlq kacqnqhfnt esqsgcklqe lkakqfikkd
      301 satywplnwr sklctckdcm kmygdldvlf ltdeydtvla yenkgkvdqa tdrrdplmdt
      361 lnsmnrvqqv eliceyndlk telkdylkrf adegtvvkre diqqffeefq skkrrrvdgm
      421 qyycs
//
LOCUS       XP_061015314            1155 aa            linear   MAM 02-DEC-2023
DEFINITION  BTB/POZ domain-containing protein 7 isoform X1 [Dama dama].
ACCESSION   XP_061015314
VERSION     XP_061015314.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159331.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1155
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1155
                     /product="BTB/POZ domain-containing protein 7 isoform X1"
                     /calculated_mol_wt=128987
     Region          140..231
                     /region_name="BTB1_POZ_BTBD7"
                     /note="first BTB (Broad-Complex, Tramtrack and Bric a
                     brac)/POZ (poxvirus and zinc finger) domain found in
                     BTB/POZ domain-containing protein 7 (BTBD7); cd18283"
                     /db_xref="CDD:349592"
     Region          245..392
                     /region_name="BTB2_POZ_BTBD7"
                     /note="second BTB (Broad-Complex, Tramtrack and Bric a
                     brac)/POZ (poxvirus and zinc finger) domain found in
                     BTB/POZ domain-containing protein 7 (BTBD7); cd18284"
                     /db_xref="CDD:349593"
     Region          397..494
                     /region_name="BACK_BTBD7"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     BTB/POZ domain-containing protein 7 (BTBD7); cd18489"
                     /db_xref="CDD:350564"
     CDS             1..1155
                     /gene="BTBD7"
                     /coded_by="XM_061159331.1:306..3773"
                     /db_xref="GeneID:133068197"
ORIGIN      
        1 mganassyph scsprvggns qaqqtfigts sysqqgygce sklysldhgh ekpqdkkkrt
       61 sglatlkkkf ikrrksnrsa dhakqmrell sgwdvrdvna lveeyegtsa lkelslqasv
      121 arpeartlqk dmadlyeyky ctdvdlifqe tcfpvhrail aarcpffktl lssspeygae
      181 iimdintagi dmpmfsallh ylytgefgme dsrfqnvdil vqlreefgtp nsldvdmrgl
      241 fdymcyydvv lsfssdselv eafggsqncl deelkahkai isarspffrn llqrrirtge
      301 eitdrtlrtp triildesii pkkyakvilh cmytdmvdla vlhcspsvgs lsevqalvag
      361 kpnmtraeea melyhialfl efnmlaqgce diiaesisld tliailkwss hpygskwvhr
      421 qalhflceef sqvmtsdvfy elskdhllta iqsdylqase qdilkylikw gehqlmkria
      481 drepnllsgt ahsvnkrgvk rrdldieelr eilssllpfv riehilpins evlsdamkrg
      541 listppsdml ptteggksna wlrqknagiy vrprlfspyv eeaksvldem mveqtdlvrl
      601 rmvrmsnvpd tlymvnnavp qcchvishqq issnqsspps vvaneipvpr llvmkdmvrr
      661 lqelrhteqv qrayalncge gatvsyeiqi rvlrefglad aaaellqflf qtecvqmfyq
      721 kvlggsslvc lfcfwllmnp hkffpderfg desplltmrq sgrgrvnstp taetmftdld
      781 sfvafhpplp pppppyhppa tpvhnqlkag wkqrppsqhp srsfsypcnh slfhsraapk
      841 agpppvylpg vkaaapdcas ttglgrqtva aaaaasaava sekqvctqpv lndlmpdiam
      901 gvstlslkdr rlpelavdte lsqavsevgp gppqhlscis qrhthtsrkk htleqktdar
      961 enqqeypdfy dfsnaacrps tpapgrrtps psqggylgpd lyshnkasps glksaylpgq
     1021 tspkkqeetr reyplppdgh phrqksepih ldvveqppqr pdfplaapen agngsahvrg
     1081 raametdltf gltpnrpshs acsseapeer sgrrladesl ghvaqrntdl eredsisrgr
     1141 rspskpdfly kksal
//
LOCUS       XP_061015315            1155 aa            linear   MAM 02-DEC-2023
DEFINITION  BTB/POZ domain-containing protein 7 isoform X1 [Dama dama].
ACCESSION   XP_061015315
VERSION     XP_061015315.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159332.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1155
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1155
                     /product="BTB/POZ domain-containing protein 7 isoform X1"
                     /calculated_mol_wt=128987
     Region          140..231
                     /region_name="BTB1_POZ_BTBD7"
                     /note="first BTB (Broad-Complex, Tramtrack and Bric a
                     brac)/POZ (poxvirus and zinc finger) domain found in
                     BTB/POZ domain-containing protein 7 (BTBD7); cd18283"
                     /db_xref="CDD:349592"
     Region          245..392
                     /region_name="BTB2_POZ_BTBD7"
                     /note="second BTB (Broad-Complex, Tramtrack and Bric a
                     brac)/POZ (poxvirus and zinc finger) domain found in
                     BTB/POZ domain-containing protein 7 (BTBD7); cd18284"
                     /db_xref="CDD:349593"
     Region          397..494
                     /region_name="BACK_BTBD7"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     BTB/POZ domain-containing protein 7 (BTBD7); cd18489"
                     /db_xref="CDD:350564"
     CDS             1..1155
                     /gene="BTBD7"
                     /coded_by="XM_061159332.1:382..3849"
                     /db_xref="GeneID:133068197"
ORIGIN      
        1 mganassyph scsprvggns qaqqtfigts sysqqgygce sklysldhgh ekpqdkkkrt
       61 sglatlkkkf ikrrksnrsa dhakqmrell sgwdvrdvna lveeyegtsa lkelslqasv
      121 arpeartlqk dmadlyeyky ctdvdlifqe tcfpvhrail aarcpffktl lssspeygae
      181 iimdintagi dmpmfsallh ylytgefgme dsrfqnvdil vqlreefgtp nsldvdmrgl
      241 fdymcyydvv lsfssdselv eafggsqncl deelkahkai isarspffrn llqrrirtge
      301 eitdrtlrtp triildesii pkkyakvilh cmytdmvdla vlhcspsvgs lsevqalvag
      361 kpnmtraeea melyhialfl efnmlaqgce diiaesisld tliailkwss hpygskwvhr
      421 qalhflceef sqvmtsdvfy elskdhllta iqsdylqase qdilkylikw gehqlmkria
      481 drepnllsgt ahsvnkrgvk rrdldieelr eilssllpfv riehilpins evlsdamkrg
      541 listppsdml ptteggksna wlrqknagiy vrprlfspyv eeaksvldem mveqtdlvrl
      601 rmvrmsnvpd tlymvnnavp qcchvishqq issnqsspps vvaneipvpr llvmkdmvrr
      661 lqelrhteqv qrayalncge gatvsyeiqi rvlrefglad aaaellqflf qtecvqmfyq
      721 kvlggsslvc lfcfwllmnp hkffpderfg desplltmrq sgrgrvnstp taetmftdld
      781 sfvafhpplp pppppyhppa tpvhnqlkag wkqrppsqhp srsfsypcnh slfhsraapk
      841 agpppvylpg vkaaapdcas ttglgrqtva aaaaasaava sekqvctqpv lndlmpdiam
      901 gvstlslkdr rlpelavdte lsqavsevgp gppqhlscis qrhthtsrkk htleqktdar
      961 enqqeypdfy dfsnaacrps tpapgrrtps psqggylgpd lyshnkasps glksaylpgq
     1021 tspkkqeetr reyplppdgh phrqksepih ldvveqppqr pdfplaapen agngsahvrg
     1081 raametdltf gltpnrpshs acsseapeer sgrrladesl ghvaqrntdl eredsisrgr
     1141 rspskpdfly kksal
//
LOCUS       XP_061015316            1155 aa            linear   MAM 02-DEC-2023
DEFINITION  BTB/POZ domain-containing protein 7 isoform X1 [Dama dama].
ACCESSION   XP_061015316
VERSION     XP_061015316.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159333.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1155
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1155
                     /product="BTB/POZ domain-containing protein 7 isoform X1"
                     /calculated_mol_wt=128987
     Region          140..231
                     /region_name="BTB1_POZ_BTBD7"
                     /note="first BTB (Broad-Complex, Tramtrack and Bric a
                     brac)/POZ (poxvirus and zinc finger) domain found in
                     BTB/POZ domain-containing protein 7 (BTBD7); cd18283"
                     /db_xref="CDD:349592"
     Region          245..392
                     /region_name="BTB2_POZ_BTBD7"
                     /note="second BTB (Broad-Complex, Tramtrack and Bric a
                     brac)/POZ (poxvirus and zinc finger) domain found in
                     BTB/POZ domain-containing protein 7 (BTBD7); cd18284"
                     /db_xref="CDD:349593"
     Region          397..494
                     /region_name="BACK_BTBD7"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     BTB/POZ domain-containing protein 7 (BTBD7); cd18489"
                     /db_xref="CDD:350564"
     CDS             1..1155
                     /gene="BTBD7"
                     /coded_by="XM_061159333.1:126..3593"
                     /db_xref="GeneID:133068197"
ORIGIN      
        1 mganassyph scsprvggns qaqqtfigts sysqqgygce sklysldhgh ekpqdkkkrt
       61 sglatlkkkf ikrrksnrsa dhakqmrell sgwdvrdvna lveeyegtsa lkelslqasv
      121 arpeartlqk dmadlyeyky ctdvdlifqe tcfpvhrail aarcpffktl lssspeygae
      181 iimdintagi dmpmfsallh ylytgefgme dsrfqnvdil vqlreefgtp nsldvdmrgl
      241 fdymcyydvv lsfssdselv eafggsqncl deelkahkai isarspffrn llqrrirtge
      301 eitdrtlrtp triildesii pkkyakvilh cmytdmvdla vlhcspsvgs lsevqalvag
      361 kpnmtraeea melyhialfl efnmlaqgce diiaesisld tliailkwss hpygskwvhr
      421 qalhflceef sqvmtsdvfy elskdhllta iqsdylqase qdilkylikw gehqlmkria
      481 drepnllsgt ahsvnkrgvk rrdldieelr eilssllpfv riehilpins evlsdamkrg
      541 listppsdml ptteggksna wlrqknagiy vrprlfspyv eeaksvldem mveqtdlvrl
      601 rmvrmsnvpd tlymvnnavp qcchvishqq issnqsspps vvaneipvpr llvmkdmvrr
      661 lqelrhteqv qrayalncge gatvsyeiqi rvlrefglad aaaellqflf qtecvqmfyq
      721 kvlggsslvc lfcfwllmnp hkffpderfg desplltmrq sgrgrvnstp taetmftdld
      781 sfvafhpplp pppppyhppa tpvhnqlkag wkqrppsqhp srsfsypcnh slfhsraapk
      841 agpppvylpg vkaaapdcas ttglgrqtva aaaaasaava sekqvctqpv lndlmpdiam
      901 gvstlslkdr rlpelavdte lsqavsevgp gppqhlscis qrhthtsrkk htleqktdar
      961 enqqeypdfy dfsnaacrps tpapgrrtps psqggylgpd lyshnkasps glksaylpgq
     1021 tspkkqeetr reyplppdgh phrqksepih ldvveqppqr pdfplaapen agngsahvrg
     1081 raametdltf gltpnrpshs acsseapeer sgrrladesl ghvaqrntdl eredsisrgr
     1141 rspskpdfly kksal
//
LOCUS       XP_061015317            1124 aa            linear   MAM 02-DEC-2023
DEFINITION  BTB/POZ domain-containing protein 7 isoform X2 [Dama dama].
ACCESSION   XP_061015317
VERSION     XP_061015317.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159334.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1124
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1124
                     /product="BTB/POZ domain-containing protein 7 isoform X2"
                     /calculated_mol_wt=125323
     Region          140..231
                     /region_name="BTB1_POZ_BTBD7"
                     /note="first BTB (Broad-Complex, Tramtrack and Bric a
                     brac)/POZ (poxvirus and zinc finger) domain found in
                     BTB/POZ domain-containing protein 7 (BTBD7); cd18283"
                     /db_xref="CDD:349592"
     Region          245..392
                     /region_name="BTB2_POZ_BTBD7"
                     /note="second BTB (Broad-Complex, Tramtrack and Bric a
                     brac)/POZ (poxvirus and zinc finger) domain found in
                     BTB/POZ domain-containing protein 7 (BTBD7); cd18284"
                     /db_xref="CDD:349593"
     Region          397..494
                     /region_name="BACK_BTBD7"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     BTB/POZ domain-containing protein 7 (BTBD7); cd18489"
                     /db_xref="CDD:350564"
     CDS             1..1124
                     /gene="BTBD7"
                     /coded_by="XM_061159334.1:304..3678"
                     /db_xref="GeneID:133068197"
ORIGIN      
        1 mganassyph scsprvggns qaqqtfigts sysqqgygce sklysldhgh ekpqdkkkrt
       61 sglatlkkkf ikrrksnrsa dhakqmrell sgwdvrdvna lveeyegtsa lkelslqasv
      121 arpeartlqk dmadlyeyky ctdvdlifqe tcfpvhrail aarcpffktl lssspeygae
      181 iimdintagi dmpmfsallh ylytgefgme dsrfqnvdil vqlreefgtp nsldvdmrgl
      241 fdymcyydvv lsfssdselv eafggsqncl deelkahkai isarspffrn llqrrirtge
      301 eitdrtlrtp triildesii pkkyakvilh cmytdmvdla vlhcspsvgs lsevqalvag
      361 kpnmtraeea melyhialfl efnmlaqgce diiaesisld tliailkwss hpygskwvhr
      421 qalhflceef sqvmtsdvfy elskdhllta iqsdylqase qdilkylikw gehqlmkria
      481 drepnllsgt ahsvnkrgvk rrdldieelr eilssllpfv riehilpins evlsdamkrg
      541 listppsdml ptteggksna wlrqknagiy vrprlfspyv eeaksvldem mveqtdlvrl
      601 rmvrmsnvpd tlymvnnavp qcchvishqq issnqsspps vvaneipvpr llvmkdmvrr
      661 lqelrhteqv qrayalncge gatvsyeiqi rvlrefglad aaaellqnph kffpderfgd
      721 esplltmrqs grgrvnstpt aetmftdlds fvafhpplpp ppppyhppat pvhnqlkagw
      781 kqrppsqhps rsfsypcnhs lfhsraapka gpppvylpgv kaaapdcast tglgrqtvaa
      841 aaaasaavas ekqvctqpvl ndlmpdiamg vstlslkdrr lpelavdtel sqavsevgpg
      901 ppqhlscisq rhthtsrkkh tleqktdare nqqeypdfyd fsnaacrpst papgrrtpsp
      961 sqggylgpdl yshnkaspsg lksaylpgqt spkkqeetrr eyplppdghp hrqksepihl
     1021 dvveqppqrp dfplaapena gngsahvrgr aametdltfg ltpnrpshsa csseapeers
     1081 grrladeslg hvaqrntdle redsisrgrr spskpdflyk ksal
//
LOCUS       XP_061015318            2529 aa            linear   MAM 02-DEC-2023
DEFINITION  protein unc-79 homolog isoform X1 [Dama dama].
ACCESSION   XP_061015318
VERSION     XP_061015318.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159335.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2529
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2529
                     /product="protein unc-79 homolog isoform X1"
                     /calculated_mol_wt=283682
     Region          3..468
                     /region_name="UNC-79"
                     /note="Cation-channel complex subunit UNC-79; pfam14776"
                     /db_xref="CDD:434201"
     CDS             1..2529
                     /gene="UNC79"
                     /coded_by="XM_061159335.1:216..7805"
                     /db_xref="GeneID:133068198"
ORIGIN      
        1 mistlatfpp flhkdiieyl stsflpmail gssrregvpa hvnlsassml miamqytsnp
       61 vyhcqllecl mkykqevwkd llyviaygps qvkppavqml fhywpnlkpp gaiseyrglq
      121 ytawnpihcq hiechnaink pavkmcidps lsvalgdkpp plylceecsq riagdhsewl
      181 idvllpqaei saicqkkncs shvrravvtc fsagccgrhg nrpvryckrc hsnhhsnevg
      241 aasethlyqt spppintrec gaeelvcave avisllkeae fhaeqrehel nrrrqlglss
      301 shhsldntdf dnkdddkhdq rllsqfgiwf lvslctpsen tpteslarlv amvfqwfhst
      361 aymmddevgs lveklkpqfv tkwlktvcdv rfdvmvmcll pkpmefarvg gywdkscstv
      421 tqlkeglnri lclipynvis qsvwecimpe wleairtevp dnqlkefrev lskmfdielc
      481 plpfsmeemf gfiscrftgy pssvqeqall wlhvlseldi mvplqllism fsdgvnsvke
      541 lanqrksrvs elagnlaarr vsvasdpgrr vqhnmlspfh spfqspfrsp mrspfrspfk
      601 nfghqggrti dfdceddemn lncfilmfdl llkqmelqdd gitmgfehsl skdiisiinn
      661 vfqapwggsh tcqkeekaie cnlcqssilc yqlaceller lapkeesrlv eptdsledsl
      721 lssrpefiig pegeeeenpa nkheenpgnr tepmehaaik ndterkfcyq qlpvtlrliy
      781 tifqemakfe epdilfnmln clkilclhge clyiarkdhp qflayiqdhm liaslwrvvk
      841 sefsqlssla vplllhalsl phgadifwti ingnfnskdw kmrfeavekv avicrfldih
      901 svtknhllky slahafccfl tavedvnpav atragllldt ikrpalqglc lcldfqfdtv
      961 vkdrptilsk llllhflkqd ipalsweffv nrfetlslea qlhldcnkef pfpttitavr
     1021 tnvanlsdaa lwkikrarfa rnrqksvrsl rdsvkgpaes kralslpetl tskipvrltr
     1081 heqsapalgg tpeqtpgqqs pendntikdl lpedagidhq tvhqlitvlm kfmakdessa
     1141 esdissakaf ntvkrhlyvl lgydqqegcf miapqkmrls tcfnafiagi aqvmdyninl
     1201 gkhllplvvq vlkycscpql rhyfqqpprc slwslkphir qmwlkallvi lykypyrdcd
     1261 iskvllhlih itvntlnaqy hsckphatag plysdnsnis rysekekeed svfdesdihd
     1321 tptgpcnkes qtffarlkri ggskmvkyqp vemnvqrsei elaeyrdtsa lqdnilqcvr
     1381 eesiqkkklr slkqksldig nadsllftld ehrrkscidr cdidkpsaqa ayfmqrqhdh
     1441 grsrqnsatr pdnadipenl avegfqesrr pvipevrlnc meafevkvds pikpapkedl
     1501 dlidlssdst sgpekhslrs tsdsdslvfe plpplrives deeetmdqgn egasgqnaas
     1561 ltsvpghpsg lslgttplvr vsvedcskdf sskdsgnnqs agnkaaslta ledptdseel
     1621 vkpeelqels ygspltlkqk rdllqksfal petslddnae psteeekpcg lmpssgtktv
     1681 llkvpedsen pmegekpnav aesdteqnpe rkadeegaee sefkiqivpr qrkqrkiavs
     1741 aiqreyldis fnildklgdq kdpdpatkgl stlempress saptldagvp etsshssist
     1801 qyrqmkrgsl galtmsqlmk rqlehqssap hnisnwdteq iqpgkrqcnv pmclnpdleg
     1861 qplrmrgatk ssllsapsiv smfvpapeef tdeqptvmtd kchdcgaile eydeetlgla
     1921 ivvlstfihl spdlaaplll dimqsvgrla ssmtfsnqae smmvpgnaag vakqflrcif
     1981 hqlapngifp qlfqstikdg tflrtlatsl mdfnelssia alsqllegln nkknlpagga
     2041 mircleniat fmealpmdsp sslwttisnq fqtffaklpc vlplkcslds slrimicllk
     2101 ipstnatrsl lepfskllsf viqnavftla ylvevcglcy raftkerdkf ylsrsvvlel
     2161 lqalklkspl pdtnllllvq ficadagtkl aestilskqm iasvpgcgta amecmrqyin
     2221 dvldfmadmh tltklkshmk tcsqplhedt fgghlkvgla qiaameisrg nhrdnkavir
     2281 ylpwlyhpps amqqgpkefi ecvshirlls wlllgalthn avcpnasspc lpipldagsh
     2341 iadhlivili gfpeqsktsv lhmcslfhaf ifaqlwtvyc eqsavatnvq sqnefsftai
     2401 ltalefwsrv tpsilqlmah nkvmvemvcl hvislmealq ecnstifvkl ipmwlpmiqs
     2461 nikhlsaglq lrlqaiqnnv nhhslrtlpg saqssaglaa lrkwlqctqf kmaqveiqss
     2521 eaasqfypl
//
LOCUS       XP_061015319            2507 aa            linear   MAM 02-DEC-2023
DEFINITION  protein unc-79 homolog isoform X2 [Dama dama].
ACCESSION   XP_061015319
VERSION     XP_061015319.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159336.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2507
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2507
                     /product="protein unc-79 homolog isoform X2"
                     /calculated_mol_wt=281456
     Region          3..468
                     /region_name="UNC-79"
                     /note="Cation-channel complex subunit UNC-79; pfam14776"
                     /db_xref="CDD:434201"
     CDS             1..2507
                     /gene="UNC79"
                     /coded_by="XM_061159336.1:216..7739"
                     /db_xref="GeneID:133068198"
ORIGIN      
        1 mistlatfpp flhkdiieyl stsflpmail gssrregvpa hvnlsassml miamqytsnp
       61 vyhcqllecl mkykqevwkd llyviaygps qvkppavqml fhywpnlkpp gaiseyrglq
      121 ytawnpihcq hiechnaink pavkmcidps lsvalgdkpp plylceecsq riagdhsewl
      181 idvllpqaei saicqkkncs shvrravvtc fsagccgrhg nrpvryckrc hsnhhsnevg
      241 aasethlyqt spppintrec gaeelvcave avisllkeae fhaeqrehel nrrrqlglss
      301 shhsldntdf dnkdddkhdq rllsqfgiwf lvslctpsen tpteslarlv amvfqwfhst
      361 aymmddevgs lveklkpqfv tkwlktvcdv rfdvmvmcll pkpmefarvg gywdkscstv
      421 tqlkeglnri lclipynvis qsvwecimpe wleairtevp dnqlkefrev lskmfdielc
      481 plpfsmeemf gfiscrftgy pssvqeqall wlhvlseldi mvplqllism fsdgvnsvke
      541 lanqrksrvs elagnlaarr vsvasdpgrr vqhnmlspfh spfqspfrsp mrspfrspfk
      601 nfghqggrti dfdceddemn lncfilmfdl llkqmelqdd gitmgfehsl skdiisiinn
      661 vfqapwggsh tcqkeekaie cnlcqssilc yqlaceller lapkeesrlv eptdsledsl
      721 lssrpefiig pegeeeenpa nkheenpgnr tepmehaaik ndterkfcyq qlpvtlrliy
      781 tifqemakfe epdilfnmln clkilclhge clyiarkdhp qflayiqdhm liaslwrvvk
      841 sefsqlssla vplllhalsl phgadifwti ingnfnskdw kmrfeavekv avicrfldih
      901 svtknhllky slahafccfl tavedvnpav atragllldt ikrpalqglc lcldfqfdtv
      961 vkdrptilsk llllhflkqd ipalsweffv nrfetlslea qlhldcnkef pfpttitavr
     1021 tnvanlsdaa lwkikrarfa rnrqksvrsl rdsvkgpaes kralslpetl tskirqqspe
     1081 ndntikdllp edagidhqtv hqlitvlmkf makdessaes dissakafnt vkrhlyvllg
     1141 ydqqegcfmi apqkmrlstc fnafiagiaq vmdyninlgk hllplvvqvl kycscpqlrh
     1201 yfqqpprcsl wslkphirqm wlkallvily kypyrdcdis kvllhlihit vntlnaqyhs
     1261 ckphatagpl ysdnsnisry sekekeedsv fdesdihdtp tgpcnkesqt ffarlkrigg
     1321 skmvkyqpve mnvqrseiel aeyrdtsalq dnilqcvree siqkkklrsl kqksldigna
     1381 dsllftldeh rrkscidrcd idkpsaqaay fmqrqhdhgr srqnsatrpd nadipenlav
     1441 egfqesrrpv ipevrlncme afevkvdspi kpapkedldl idlssdstsg pekhslrsts
     1501 dsdslvfepl pplrivesde eetmdqgneg asgqnaaslt svpghpsgls lgttplvrvs
     1561 vedcskdfss kdsgnnqsag nkaasltale dptdseelvk peelqelsyg spltlkqkrd
     1621 llqksfalpe tslddnaeps teeekpcglm pssgtktvll kvpedsenpm egekpnavae
     1681 sdteqnperk adeegaeese fkiqivprqr kqrkiavsai qreyldisfn ildklgdqkd
     1741 pdpatkglst lempresssa ptldagvpet sshssistqy rqmkrgslga ltmsqlmkrq
     1801 lehqssaphn isnwdteqiq pgkrqcnvpm clnpdlegqp lrmrgatkss llsapsivsm
     1861 fvpapeeftd eqptvmtdkc hdcgaileey deetlglaiv vlstfihlsp dlaapllldi
     1921 mqsvgrlass mtfsnqaesm mvpgnaagva kqflrcifhq lapngifpql fqstikdgtf
     1981 lrtlatslmd fnelssiaal sqlleglnnk knlpaggami rcleniatfm ealpmdspss
     2041 lwttisnqfq tffaklpcvl plkcsldssl rimicllkip stnatrslle pfskllsfvi
     2101 qnavftlayl vevcglcyra ftkerdkfyl srsvvlellq alklksplpd tnllllvqfi
     2161 cadagtklae stilskqmia svpgcgtaam ecmrqyindv ldfmadmhtl tklkshmktc
     2221 sqplhedtfg ghlkvglaqi aameisrgnh rdnkaviryl pwlyhppsam qqgpkefiec
     2281 vshirllswl llgalthnav cpnasspclp ipldagshia dhliviligf peqsktsvlh
     2341 mcslfhafif aqlwtvyceq savatnvqsq nefsftailt alefwsrvtp silqlmahnk
     2401 vmvemvclhv islmealqec nstifvklip mwlpmiqsni khlsaglqlr lqaiqnnvnh
     2461 hslrtlpgsa qssaglaalr kwlqctqfkm aqveiqssea asqfypl
//
LOCUS       XP_061015320             195 aa            linear   MAM 02-DEC-2023
DEFINITION  proline-rich membrane anchor 1 isoform X1 [Dama dama].
ACCESSION   XP_061015320
VERSION     XP_061015320.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159337.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..195
                     /product="proline-rich membrane anchor 1 isoform X1"
                     /calculated_mol_wt=21097
     Region          37..>120
                     /region_name="PRIMA1"
                     /note="Proline-rich membrane anchor 1; pfam16101"
                     /db_xref="CDD:406495"
     CDS             1..195
                     /gene="PRIMA1"
                     /coded_by="XM_061159337.1:93..680"
                     /db_xref="GeneID:133068199"
ORIGIN      
        1 mllrdlvlrr gccwpslllh calhplwgfv qvthgepqks cskvtdscqh vcqcrppppl
       61 pppppppppp rllsapapna tscpaeesww sglviviavc caslvfltvl viicykaikr
      121 vlgerpikgc gtvwqtlqaa ncrqraslrl lgargsvcay psvpgharql fvvellpveq
      181 allntqvclt glrth
//
LOCUS       XP_061015321             153 aa            linear   MAM 02-DEC-2023
DEFINITION  proline-rich membrane anchor 1 isoform X2 [Dama dama].
ACCESSION   XP_061015321
VERSION     XP_061015321.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159338.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..153
                     /product="proline-rich membrane anchor 1 isoform X2"
                     /calculated_mol_wt=16411
     Region          37..153
                     /region_name="PRIMA1"
                     /note="Proline-rich membrane anchor 1; pfam16101"
                     /db_xref="CDD:406495"
     CDS             1..153
                     /gene="PRIMA1"
                     /coded_by="XM_061159338.1:93..554"
                     /db_xref="GeneID:133068199"
ORIGIN      
        1 mllrdlvlrr gccwpslllh calhplwgfv qvthgepqks cskvtdscqh vcqcrppppl
       61 pppppppppp rllsapapna tscpaeesww sglviviavc caslvfltvl viicykaikr
      121 kplrkeengt gvaeypmtss qsskgvdans avv
//
LOCUS       XP_061015322             632 aa            linear   MAM 02-DEC-2023
DEFINITION  ankyrin repeat and SOCS box protein 2 isoform X1 [Dama dama].
ACCESSION   XP_061015322
VERSION     XP_061015322.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159339.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..632
                     /product="ankyrin repeat and SOCS box protein 2 isoform
                     X1"
                     /calculated_mol_wt=69955
     Region          105..132
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          116..397
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          134..166
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          170..199
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          201..232
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(234,236,240..241,244..246,248..249,253,256,265,267,
                     269,273..274,277..279,281..282,286,289,298,300,302,
                     306..307,310..312,314..315,319,322,331)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          234..265
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          267..298
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          300..331
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          336..>483
                     /region_name="TRPV"
                     /note="Transient Receptor Potential channel, Vanilloid
                     subfamily (TRPV); cl40437"
                     /db_xref="CDD:454755"
     Region          365..394
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          398..437
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          439..466
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          470..498
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          588..632
                     /region_name="SOCS_ASB2"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     ASB2-like proteins. ASB family members have a C-terminal
                     SOCS box and an N-terminal ankyrin-related sequence. ASB2
                     targets specific proteins to destruction by the proteasome
                     in leukemia cells that have been...; cd03721"
                     /db_xref="CDD:239691"
     Site            order(589..594,600,610,616,621)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239691"
     CDS             1..632
                     /gene="ASB2"
                     /coded_by="XM_061159339.1:365..2263"
                     /db_xref="GeneID:133068200"
ORIGIN      
        1 mateisargr praigqeeyn lysslsedel vqmaieqsla dktrgpaate ttvptrvnre
       61 pahfypwtrs avspesapts apkglfqevm qkynrsksql apvdpvlkai kegdeealta
      121 mikagknlse pnkegwlplh eaayygqlnc lkvlhraypa vidqrtlqee talylatcrg
      181 hvdclqfllq agaepdisnk sretplykac erknveavri lvqykadtnh rcnrgwtalh
      241 esvarndlev meilvsggak veaknaygit plfvaaqsgq lealrflakh radintqasd
      301 sasalyeack ngheevvefl lsqgadankt nkdgmlplhi askkgnyriv qmllpvtsrt
      361 rvrrsgispl hlaaernnde vleallgarf dvnaplaper arlyedrrss alyfavvnnn
      421 vyatelllla gadpnrdvis pllvairhgc lrtmqllldh ganidayiat hptafpatim
      481 famkclsllk flmdlgcnge pcfsclygng phppapppsn rfndaptsdk apsavqfcef
      541 lsapevsrwa gpiidvlldy vgnvqlcsrl kehidsfedw avikekaepp rplahlcrlr
      601 vrkaigkyri klldtlplpg rlirylkyen tq
//
LOCUS       XP_061015323             632 aa            linear   MAM 02-DEC-2023
DEFINITION  ankyrin repeat and SOCS box protein 2 isoform X1 [Dama dama].
ACCESSION   XP_061015323
VERSION     XP_061015323.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159340.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..632
                     /product="ankyrin repeat and SOCS box protein 2 isoform
                     X1"
                     /calculated_mol_wt=69955
     Region          105..132
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          116..397
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          134..166
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          170..199
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          201..232
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(234,236,240..241,244..246,248..249,253,256,265,267,
                     269,273..274,277..279,281..282,286,289,298,300,302,
                     306..307,310..312,314..315,319,322,331)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          234..265
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          267..298
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          300..331
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          336..>483
                     /region_name="TRPV"
                     /note="Transient Receptor Potential channel, Vanilloid
                     subfamily (TRPV); cl40437"
                     /db_xref="CDD:454755"
     Region          365..394
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          398..437
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          439..466
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          470..498
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          588..632
                     /region_name="SOCS_ASB2"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     ASB2-like proteins. ASB family members have a C-terminal
                     SOCS box and an N-terminal ankyrin-related sequence. ASB2
                     targets specific proteins to destruction by the proteasome
                     in leukemia cells that have been...; cd03721"
                     /db_xref="CDD:239691"
     Site            order(589..594,600,610,616,621)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239691"
     CDS             1..632
                     /gene="ASB2"
                     /coded_by="XM_061159340.1:146..2044"
                     /db_xref="GeneID:133068200"
ORIGIN      
        1 mateisargr praigqeeyn lysslsedel vqmaieqsla dktrgpaate ttvptrvnre
       61 pahfypwtrs avspesapts apkglfqevm qkynrsksql apvdpvlkai kegdeealta
      121 mikagknlse pnkegwlplh eaayygqlnc lkvlhraypa vidqrtlqee talylatcrg
      181 hvdclqfllq agaepdisnk sretplykac erknveavri lvqykadtnh rcnrgwtalh
      241 esvarndlev meilvsggak veaknaygit plfvaaqsgq lealrflakh radintqasd
      301 sasalyeack ngheevvefl lsqgadankt nkdgmlplhi askkgnyriv qmllpvtsrt
      361 rvrrsgispl hlaaernnde vleallgarf dvnaplaper arlyedrrss alyfavvnnn
      421 vyatelllla gadpnrdvis pllvairhgc lrtmqllldh ganidayiat hptafpatim
      481 famkclsllk flmdlgcnge pcfsclygng phppapppsn rfndaptsdk apsavqfcef
      541 lsapevsrwa gpiidvlldy vgnvqlcsrl kehidsfedw avikekaepp rplahlcrlr
      601 vrkaigkyri klldtlplpg rlirylkyen tq
//
LOCUS       XP_061015324             632 aa            linear   MAM 02-DEC-2023
DEFINITION  ankyrin repeat and SOCS box protein 2 isoform X1 [Dama dama].
ACCESSION   XP_061015324
VERSION     XP_061015324.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159341.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..632
                     /product="ankyrin repeat and SOCS box protein 2 isoform
                     X1"
                     /calculated_mol_wt=69955
     Region          105..132
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          116..397
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          134..166
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          170..199
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          201..232
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(234,236,240..241,244..246,248..249,253,256,265,267,
                     269,273..274,277..279,281..282,286,289,298,300,302,
                     306..307,310..312,314..315,319,322,331)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          234..265
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          267..298
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          300..331
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          336..>483
                     /region_name="TRPV"
                     /note="Transient Receptor Potential channel, Vanilloid
                     subfamily (TRPV); cl40437"
                     /db_xref="CDD:454755"
     Region          365..394
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          398..437
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          439..466
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          470..498
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          588..632
                     /region_name="SOCS_ASB2"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     ASB2-like proteins. ASB family members have a C-terminal
                     SOCS box and an N-terminal ankyrin-related sequence. ASB2
                     targets specific proteins to destruction by the proteasome
                     in leukemia cells that have been...; cd03721"
                     /db_xref="CDD:239691"
     Site            order(589..594,600,610,616,621)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239691"
     CDS             1..632
                     /gene="ASB2"
                     /coded_by="XM_061159341.1:99..1997"
                     /db_xref="GeneID:133068200"
ORIGIN      
        1 mateisargr praigqeeyn lysslsedel vqmaieqsla dktrgpaate ttvptrvnre
       61 pahfypwtrs avspesapts apkglfqevm qkynrsksql apvdpvlkai kegdeealta
      121 mikagknlse pnkegwlplh eaayygqlnc lkvlhraypa vidqrtlqee talylatcrg
      181 hvdclqfllq agaepdisnk sretplykac erknveavri lvqykadtnh rcnrgwtalh
      241 esvarndlev meilvsggak veaknaygit plfvaaqsgq lealrflakh radintqasd
      301 sasalyeack ngheevvefl lsqgadankt nkdgmlplhi askkgnyriv qmllpvtsrt
      361 rvrrsgispl hlaaernnde vleallgarf dvnaplaper arlyedrrss alyfavvnnn
      421 vyatelllla gadpnrdvis pllvairhgc lrtmqllldh ganidayiat hptafpatim
      481 famkclsllk flmdlgcnge pcfsclygng phppapppsn rfndaptsdk apsavqfcef
      541 lsapevsrwa gpiidvlldy vgnvqlcsrl kehidsfedw avikekaepp rplahlcrlr
      601 vrkaigkyri klldtlplpg rlirylkyen tq
//
LOCUS       XP_061015325             550 aa            linear   MAM 02-DEC-2023
DEFINITION  ankyrin repeat and SOCS box protein 2 isoform X2 [Dama dama].
ACCESSION   XP_061015325
VERSION     XP_061015325.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159342.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..550
                     /product="ankyrin repeat and SOCS box protein 2 isoform
                     X2"
                     /calculated_mol_wt=60796
     Region          105..132
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <107..315
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          134..166
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(170,174..175,178..180,182..183,187,190,199,201,203,
                     207,225,228..230,232..233,237,240,249,251,253,257..258,
                     261..263,265..266,270)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          170..199
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          201..249
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          254..>401
                     /region_name="TRPV"
                     /note="Transient Receptor Potential channel, Vanilloid
                     subfamily (TRPV); cl40437"
                     /db_xref="CDD:454755"
     Region          283..312
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          316..355
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          357..384
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          388..416
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          506..550
                     /region_name="SOCS"
                     /note="SOCS (suppressors of cytokine signaling) box. The
                     SOCS box is found in the C-terminal region of CIS/SOCS
                     family proteins (in combination with a SH2 domain), ASBs
                     (ankyrin repeat-containing proteins with a SOCS box), SSBs
                     (SPRY domain-containing proteins...; cl02533"
                     /db_xref="CDD:470605"
     Site            order(507..512,518,528,534)
                     /site_type="active"
                     /note="elongin B/C interaction [active]"
                     /db_xref="CDD:239641"
     CDS             1..550
                     /gene="ASB2"
                     /coded_by="XM_061159342.1:367..2019"
                     /db_xref="GeneID:133068200"
ORIGIN      
        1 mateisargr praigqeeyn lysslsedel vqmaieqsla dktrgpaate ttvptrvnre
       61 pahfypwtrs avspesapts apkglfqevm qkynrsksql apvdpvlkai kegdeealta
      121 mikagknlse pnkegwlplh eaayygqlnc lkvlhraypa vidqrtlqee talylatcrg
      181 hvdclqfllq agaepdisnk sretplykga dintqasdsa salyeackng heevveflls
      241 qgadanktnk dgmlplhias kkgnyrivqm llpvtsrtrv rrsgisplhl aaernndevl
      301 eallgarfdv naplaperar lyedrrssal yfavvnnnvy atellllaga dpnrdvispl
      361 lvairhgclr tmqllldhga nidayiathp tafpatimfa mkclsllkfl mdlgcngepc
      421 fsclygngph ppapppsnrf ndaptsdkap savqfcefls apevsrwagp iidvlldyvg
      481 nvqlcsrlke hidsfedwav ikekaepprp lahlcrlrvr kaigkyrikl ldtlplpgrl
      541 irylkyentq
//
LOCUS       XP_061015326             543 aa            linear   MAM 02-DEC-2023
DEFINITION  ankyrin repeat and SOCS box protein 2 isoform X3 [Dama dama].
ACCESSION   XP_061015326
VERSION     XP_061015326.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159343.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..543
                     /product="ankyrin repeat and SOCS box protein 2 isoform
                     X3"
                     /calculated_mol_wt=60194
     Region          16..43
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          27..308
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          45..77
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          81..110
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          112..143
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(145,147,151..152,155..157,159..160,164,167,176,178,
                     180,184..185,188..190,192..193,197,200,209,211,213,
                     217..218,221..223,225..226,230,233,242)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          145..176
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          178..209
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          211..242
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          276..305
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          281..377
                     /region_name="Ank_2"
                     /note="Ankyrin repeats (3 copies); pfam12796"
                     /db_xref="CDD:463710"
     Region          309..348
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          350..377
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          381..409
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          499..543
                     /region_name="SOCS_ASB2"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     ASB2-like proteins. ASB family members have a C-terminal
                     SOCS box and an N-terminal ankyrin-related sequence. ASB2
                     targets specific proteins to destruction by the proteasome
                     in leukemia cells that have been...; cd03721"
                     /db_xref="CDD:239691"
     Site            order(500..505,511,521,527,532)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239691"
     CDS             1..543
                     /gene="ASB2"
                     /coded_by="XM_061159343.1:158..1789"
                     /db_xref="GeneID:133068200"
ORIGIN      
        1 mqkynrsksq lapvdpvlka ikegdeealt amikagknls epnkegwlpl heaayygqln
       61 clkvlhrayp avidqrtlqe etalylatcr ghvdclqfll qagaepdisn ksretplyka
      121 cerknveavr ilvqykadtn hrcnrgwtal hesvarndle vmeilvsgga kveaknaygi
      181 tplfvaaqsg qlealrflak hradintqas dsasalyeac kngheevvef llsqgadank
      241 tnkdgmlplh iaskkgnyri vqmllpvtsr trvrrsgisp lhlaaernnd evleallgar
      301 fdvnaplape rarlyedrrs salyfavvnn nvyatellll agadpnrdvi spllvairhg
      361 clrtmqllld hganidayia thptafpati mfamkclsll kflmdlgcng epcfsclygn
      421 gphppappps nrfndaptsd kapsavqfce flsapevsrw agpiidvlld yvgnvqlcsr
      481 lkehidsfed wavikekaep prplahlcrl rvrkaigkyr iklldtlplp grlirylkye
      541 ntq
//
LOCUS       XP_061015327             542 aa            linear   MAM 02-DEC-2023
DEFINITION  ankyrin repeat and SOCS box protein 2 isoform X4 [Dama dama].
ACCESSION   XP_061015327
VERSION     XP_061015327.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159344.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..542
                     /product="ankyrin repeat and SOCS box protein 2 isoform
                     X4"
                     /calculated_mol_wt=59929
     Region          15..42
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          26..307
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          44..76
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          80..109
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          111..142
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(144,146,150..151,154..156,158..159,163,166,175,177,
                     179,183..184,187..189,191..192,196,199,208,210,212,
                     216..217,220..222,224..225,229,232,241)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          144..175
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          177..208
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          210..241
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          275..304
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          280..376
                     /region_name="Ank_2"
                     /note="Ankyrin repeats (3 copies); pfam12796"
                     /db_xref="CDD:463710"
     Region          308..347
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          349..376
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          380..408
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          498..542
                     /region_name="SOCS_ASB2"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     ASB2-like proteins. ASB family members have a C-terminal
                     SOCS box and an N-terminal ankyrin-related sequence. ASB2
                     targets specific proteins to destruction by the proteasome
                     in leukemia cells that have been...; cd03721"
                     /db_xref="CDD:239691"
     Site            order(499..504,510,520,526,531)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239691"
     CDS             1..542
                     /gene="ASB2"
                     /coded_by="XM_061159344.1:251..1879"
                     /db_xref="GeneID:133068200"
ORIGIN      
        1 malmgtpgli wpvdpvlkai kegdeealta mikagknlse pnkegwlplh eaayygqlnc
       61 lkvlhraypa vidqrtlqee talylatcrg hvdclqfllq agaepdisnk sretplykac
      121 erknveavri lvqykadtnh rcnrgwtalh esvarndlev meilvsggak veaknaygit
      181 plfvaaqsgq lealrflakh radintqasd sasalyeack ngheevvefl lsqgadankt
      241 nkdgmlplhi askkgnyriv qmllpvtsrt rvrrsgispl hlaaernnde vleallgarf
      301 dvnaplaper arlyedrrss alyfavvnnn vyatelllla gadpnrdvis pllvairhgc
      361 lrtmqllldh ganidayiat hptafpatim famkclsllk flmdlgcnge pcfsclygng
      421 phppapppsn rfndaptsdk apsavqfcef lsapevsrwa gpiidvlldy vgnvqlcsrl
      481 kehidsfedw avikekaepp rplahlcrlr vrkaigkyri klldtlplpg rlirylkyen
      541 tq
//
LOCUS       XP_061015328             861 aa            linear   MAM 02-DEC-2023
DEFINITION  ATP-dependent RNA helicase DDX24 [Dama dama].
ACCESSION   XP_061015328
VERSION     XP_061015328.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159345.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..861
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..861
                     /product="ATP-dependent RNA helicase DDX24"
                     /calculated_mol_wt=95595
     Region          202..552
                     /region_name="DEADc_DDX24"
                     /note="DEAD-box helicase domain of DEAD box protein 24;
                     cd17946"
                     /db_xref="CDD:350704"
     Site            order(210..211,213..215,218,237..244)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350704"
     Region          563..691
                     /region_name="SF2_C_DEAD"
                     /note="C-terminal helicase domain of the DEAD box
                     helicases; cd18787"
                     /db_xref="CDD:350174"
     Site            order(650,652,677,680..681)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350174"
     CDS             1..861
                     /gene="DDX24"
                     /coded_by="XM_061159345.1:124..2709"
                     /db_xref="GeneID:133068202"
ORIGIN      
        1 mklkekkssp kptnsgrfqk kgikvvgqwk evkidpnmfa dgqmddlvcf eeltdyrlvs
       61 paksssslfl keepkkrkaq avsegeeege pssskkkmkl kkskdvetee tsaqkafevk
      121 dtepvpqgeg tvcpdpevge maskspvqtv pkkkkkkgkk ksalsqgtsp kvpkkaktwm
      181 pethdhkadv sawkdlfvpk pvlralsflg fsaptpiqal tlapairdkl dilgaaetgs
      241 gktlafaipv ihtvlqwqvk kpapalsstg appgeagnep gaenrspgra galpdeigie
      301 gealssevgt kagtppsqag tktgaapser gllscdddvd agegpsslir ekpipeqeen
      361 qvekhdeeqt gklkkelggs tappkrpllg lvltptrela vqvkqhvdav akftsiktai
      421 lvggmstqkq qrmlnrqpei viatpgrlwe lvkekhphls nlrqlrclvi deadrmvekg
      481 hfaelsqlle vlsdsqyspk rqtlvfsatl tlvhqapari lhkkhakkid ktakldllmq
      541 kigmrgkpkv idltrkeatv etltetkihc etdekdlyly yflmqhpgrt lvfansisci
      601 krlsgllkvl dimpltlhac mhqkqrlrnl eqfahledcv llatdvaarg ldipkvqhvi
      661 hyqvprtsei yvhrsgrtar atneglslml vgpedvinfk kiyktlkkde diplfpvqtk
      721 ymdavkerir larqiekaey rnfqaclhns wieqaaaale ieleeemykg gkvdeqeerr
      781 rqkqikilkk elrhllsqpl fkddlktkyp tqsgklpvlm saprkgesal sclskqkkkk
      841 kkkqqpkeql qeqpqpstsa g
//
LOCUS       XP_061015329             861 aa            linear   MAM 02-DEC-2023
DEFINITION  ATP-dependent RNA helicase DDX24 [Dama dama].
ACCESSION   XP_061015329
VERSION     XP_061015329.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159346.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..861
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..861
                     /product="ATP-dependent RNA helicase DDX24"
                     /calculated_mol_wt=95595
     Region          202..552
                     /region_name="DEADc_DDX24"
                     /note="DEAD-box helicase domain of DEAD box protein 24;
                     cd17946"
                     /db_xref="CDD:350704"
     Site            order(210..211,213..215,218,237..244)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350704"
     Region          563..691
                     /region_name="SF2_C_DEAD"
                     /note="C-terminal helicase domain of the DEAD box
                     helicases; cd18787"
                     /db_xref="CDD:350174"
     Site            order(650,652,677,680..681)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350174"
     CDS             1..861
                     /gene="DDX24"
                     /coded_by="XM_061159346.1:107..2692"
                     /db_xref="GeneID:133068202"
ORIGIN      
        1 mklkekkssp kptnsgrfqk kgikvvgqwk evkidpnmfa dgqmddlvcf eeltdyrlvs
       61 paksssslfl keepkkrkaq avsegeeege pssskkkmkl kkskdvetee tsaqkafevk
      121 dtepvpqgeg tvcpdpevge maskspvqtv pkkkkkkgkk ksalsqgtsp kvpkkaktwm
      181 pethdhkadv sawkdlfvpk pvlralsflg fsaptpiqal tlapairdkl dilgaaetgs
      241 gktlafaipv ihtvlqwqvk kpapalsstg appgeagnep gaenrspgra galpdeigie
      301 gealssevgt kagtppsqag tktgaapser gllscdddvd agegpsslir ekpipeqeen
      361 qvekhdeeqt gklkkelggs tappkrpllg lvltptrela vqvkqhvdav akftsiktai
      421 lvggmstqkq qrmlnrqpei viatpgrlwe lvkekhphls nlrqlrclvi deadrmvekg
      481 hfaelsqlle vlsdsqyspk rqtlvfsatl tlvhqapari lhkkhakkid ktakldllmq
      541 kigmrgkpkv idltrkeatv etltetkihc etdekdlyly yflmqhpgrt lvfansisci
      601 krlsgllkvl dimpltlhac mhqkqrlrnl eqfahledcv llatdvaarg ldipkvqhvi
      661 hyqvprtsei yvhrsgrtar atneglslml vgpedvinfk kiyktlkkde diplfpvqtk
      721 ymdavkerir larqiekaey rnfqaclhns wieqaaaale ieleeemykg gkvdeqeerr
      781 rqkqikilkk elrhllsqpl fkddlktkyp tqsgklpvlm saprkgesal sclskqkkkk
      841 kkkqqpkeql qeqpqpstsa g
//
LOCUS       XP_061015330             234 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin thioesterase OTUB2 [Dama dama].
ACCESSION   XP_061015330
VERSION     XP_061015330.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159347.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..234
                     /product="ubiquitin thioesterase OTUB2"
                     /calculated_mol_wt=27143
     Region          8..229
                     /region_name="OTUB2"
                     /note="Ubiquitin Thioesterase Otubain-2; cd22764"
                     /db_xref="CDD:438601"
     Site            order(51,149,152..155,157,174..177,195,204,206,210,220,
                     223,225)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438601"
     CDS             1..234
                     /gene="OTUB2"
                     /coded_by="XM_061159347.1:164..868"
                     /db_xref="GeneID:133068203"
ORIGIN      
        1 msetsfnlis ekcdilsilr dhpenriyqr kiqelskrft airktkgdgn cfyralgysy
       61 lesllgksre ilkfkervlq tpndllaagf eehkfqnffn afysvvelve kdgsvssllk
      121 vfndqsfsdr ivqflrllts afirnradff rhfideemdi kdfcthevep mamecdhiqi
      181 talsqalnia lqveyvdemd talnhhvfpe aatpsvylly ktshynilya adkh
//
LOCUS       XP_061015331             219 aa            linear   MAM 02-DEC-2023
DEFINITION  interferon alpha-inducible protein 27-like protein 2 [Dama dama].
ACCESSION   XP_061015331
VERSION     XP_061015331.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159348.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..219
                     /product="interferon alpha-inducible protein 27-like
                     protein 2"
                     /calculated_mol_wt=21140
     Region          86..164
                     /region_name="Ifi-6-16"
                     /note="Interferon-induced 6-16 family; pfam06140"
                     /db_xref="CDD:461837"
     CDS             1..219
                     /gene="LOC133068204"
                     /coded_by="XM_061159348.1:160..819"
                     /db_xref="GeneID:133068204"
ORIGIN      
        1 msakaiesge ggaldallpe llseeeeeps qssnqasdgs ssgktpqgph qgphqgpdgs
       61 gsdprdppks egsnfynyag ktaaavigga lavgsvpvvl gamgftgagi aassiaakmm
      121 saaavanggg vaagsvvatl qsvgaaglsa ssnillgsag svfgawmwgs kkkaapppgs
      181 steeesgsha gdefpgpqdv sppndkpsas qnssknhkk
//
LOCUS       XP_061015332             219 aa            linear   MAM 02-DEC-2023
DEFINITION  interferon alpha-inducible protein 27-like protein 2 [Dama dama].
ACCESSION   XP_061015332
VERSION     XP_061015332.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159349.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..219
                     /product="interferon alpha-inducible protein 27-like
                     protein 2"
                     /calculated_mol_wt=21140
     Region          86..164
                     /region_name="Ifi-6-16"
                     /note="Interferon-induced 6-16 family; pfam06140"
                     /db_xref="CDD:461837"
     CDS             1..219
                     /gene="LOC133068204"
                     /coded_by="XM_061159349.1:180..839"
                     /db_xref="GeneID:133068204"
ORIGIN      
        1 msakaiesge ggaldallpe llseeeeeps qssnqasdgs ssgktpqgph qgphqgpdgs
       61 gsdprdppks egsnfynyag ktaaavigga lavgsvpvvl gamgftgagi aassiaakmm
      121 saaavanggg vaagsvvatl qsvgaaglsa ssnillgsag svfgawmwgs kkkaapppgs
      181 steeesgsha gdefpgpqdv sppndkpsas qnssknhkk
//
LOCUS       XP_061015333             219 aa            linear   MAM 02-DEC-2023
DEFINITION  interferon alpha-inducible protein 27-like protein 2 [Dama dama].
ACCESSION   XP_061015333
VERSION     XP_061015333.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159350.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..219
                     /product="interferon alpha-inducible protein 27-like
                     protein 2"
                     /calculated_mol_wt=21140
     Region          86..164
                     /region_name="Ifi-6-16"
                     /note="Interferon-induced 6-16 family; pfam06140"
                     /db_xref="CDD:461837"
     CDS             1..219
                     /gene="LOC133068204"
                     /coded_by="XM_061159350.1:134..793"
                     /db_xref="GeneID:133068204"
ORIGIN      
        1 msakaiesge ggaldallpe llseeeeeps qssnqasdgs ssgktpqgph qgphqgpdgs
       61 gsdprdppks egsnfynyag ktaaavigga lavgsvpvvl gamgftgagi aassiaakmm
      121 saaavanggg vaagsvvatl qsvgaaglsa ssnillgsag svfgawmwgs kkkaapppgs
      181 steeesgsha gdefpgpqdv sppndkpsas qnssknhkk
//
LOCUS       XP_061015334             219 aa            linear   MAM 02-DEC-2023
DEFINITION  interferon alpha-inducible protein 27-like protein 2 [Dama dama].
ACCESSION   XP_061015334
VERSION     XP_061015334.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159351.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..219
                     /product="interferon alpha-inducible protein 27-like
                     protein 2"
                     /calculated_mol_wt=21140
     Region          86..164
                     /region_name="Ifi-6-16"
                     /note="Interferon-induced 6-16 family; pfam06140"
                     /db_xref="CDD:461837"
     CDS             1..219
                     /gene="LOC133068204"
                     /coded_by="XM_061159351.1:170..829"
                     /db_xref="GeneID:133068204"
ORIGIN      
        1 msakaiesge ggaldallpe llseeeeeps qssnqasdgs ssgktpqgph qgphqgpdgs
       61 gsdprdppks egsnfynyag ktaaavigga lavgsvpvvl gamgftgagi aassiaakmm
      121 saaavanggg vaagsvvatl qsvgaaglsa ssnillgsag svfgawmwgs kkkaapppgs
      181 steeesgsha gdefpgpqdv sppndkpsas qnssknhkk
//
LOCUS       XP_061015335             175 aa            linear   MAM 02-DEC-2023
DEFINITION  interferon alpha-inducible protein 27-like protein 2 [Dama dama].
ACCESSION   XP_061015335
VERSION     XP_061015335.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159352.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..175
                     /product="interferon alpha-inducible protein 27-like
                     protein 2"
                     /calculated_mol_wt=17880
     Region          82..160
                     /region_name="Ifi-6-16"
                     /note="Interferon-induced 6-16 family; pfam06140"
                     /db_xref="CDD:461837"
     CDS             1..175
                     /gene="LOC133068205"
                     /coded_by="XM_061159352.1:144..671"
                     /db_xref="GeneID:133068205"
ORIGIN      
        1 msakaiesge ggaldallpe llseeeeeps qssnqasdgs slwkppqrph qgahgsgsyp
       61 rdppqsedsn fyhyagmtaa aviggvmavr avpelldtmg ftrtgisrss vaanmmssta
      121 ranggrvpsg slvsnlqskg atglstpsni llgsagallg allwnsssss rrtqy
//
LOCUS       XP_061015336             175 aa            linear   MAM 02-DEC-2023
DEFINITION  interferon alpha-inducible protein 27, mitochondrial-like isoform
            X1 [Dama dama].
ACCESSION   XP_061015336
VERSION     XP_061015336.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159353.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..175
                     /product="interferon alpha-inducible protein 27,
                     mitochondrial-like isoform X1"
                     /calculated_mol_wt=15984
     Region          98..169
                     /region_name="Ifi-6-16"
                     /note="Interferon-induced 6-16 family; pfam06140"
                     /db_xref="CDD:461837"
     CDS             1..175
                     /gene="LOC133068207"
                     /coded_by="XM_061159353.1:183..710"
                     /db_xref="GeneID:133068207"
ORIGIN      
        1 meftkvafla sklaskilsa gslakvggaa sssilaglps lgltlpssaa lagatstlgs
       61 lvgtlkgsfl lgspaaalgt lpvgakaava vvggastvaa vpavlsavgf tsagitassl
      121 aakmmsisai angggvaags lvatlqsvga sglcmsskll lgiagstlas klvgl
//
LOCUS       XP_061015337             165 aa            linear   MAM 02-DEC-2023
DEFINITION  interferon alpha-inducible protein 27-like protein 2A isoform X2
            [Dama dama].
ACCESSION   XP_061015337
VERSION     XP_061015337.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159354.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..165
                     /product="interferon alpha-inducible protein 27-like
                     protein 2A isoform X2"
                     /calculated_mol_wt=15160
     Region          83..159
                     /region_name="Ifi-6-16"
                     /note="Interferon-induced 6-16 family; pfam06140"
                     /db_xref="CDD:461837"
     CDS             1..165
                     /gene="LOC133068207"
                     /coded_by="XM_061159354.1:183..680"
                     /db_xref="GeneID:133068207"
ORIGIN      
        1 meftkvafla sklaskilsa gslakvggaa sssilaglps lgltlpssaa lagatstlgs
       61 lvgtlkgsfl lgspaaalgt lpvgastvaa vpavlsavgf tsagitassl aakmmsisai
      121 angggvaags lvatlqsvga sglcmsskll lgiagstlas klvgl
//
LOCUS       XP_061015341             307 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133068208 [Dama dama].
ACCESSION   XP_061015341
VERSION     XP_061015341.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159358.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..307
                     /product="uncharacterized protein LOC133068208"
                     /calculated_mol_wt=34217
     Region          2..80
                     /region_name="RT_RNaseH_2"
                     /note="RNase H-like domain found in reverse transcriptase;
                     pfam17919"
                     /db_xref="CDD:465567"
     Region          37..130
                     /region_name="RT_RNaseH"
                     /note="RNase H-like domain found in reverse transcriptase;
                     pfam17917"
                     /db_xref="CDD:465565"
     Region          186..>221
                     /region_name="RNase_H_like"
                     /note="Ribonuclease H-like superfamily, including RNase H,
                     HI, HII, HIII, and RNase-like domain IV of spliceosomal
                     protein Prp8; cl14782"
                     /db_xref="CDD:449355"
     CDS             1..307
                     /gene="LOC133068208"
                     /coded_by="XM_061159358.1:1276..2199"
                     /db_xref="GeneID:133068208"
ORIGIN      
        1 mwgtpqkkae atlkqaltqa palrlpdpkk afheregial galtqrlgse pqpvaylskr
       61 ldptaqgwpp sptfkylaai aimiedalkl sfggkltift shqvkqllng rghlrmsdqr
      121 ilryqvilme npgltippce vlnpatllpt pegslpfhsc letldhwtkp reglsedali
      181 npeeiwytdg sifvldgkrr agyavvsnfe iieakpllpa vkvpghdswi hysrvkpwkk
      241 teedtqytce plgdlryrfr ttnechsnkq pqnlvsgdki sqdsskeptq lcrsntpkqt
      301 gdsssdl
//
LOCUS       XP_061015342             418 aa            linear   MAM 02-DEC-2023
DEFINITION  serpin A3-7-like [Dama dama].
ACCESSION   XP_061015342
VERSION     XP_061015342.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159359.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..418
                     /product="serpin A3-7-like"
                     /calculated_mol_wt=46586
     Region          36..416
                     /region_name="serpinA3_A1AC"
                     /note="serpin family A member 3, alpha 1-antichymotrypsin;
                     cd19551"
                     /db_xref="CDD:381019"
     Site            order(363..375,377..381,385..393)
                     /site_type="other"
                     /note="reactive center loop (RCL)"
                     /db_xref="CDD:381019"
     CDS             1..418
                     /gene="LOC133068209"
                     /coded_by="XM_061159359.1:80..1336"
                     /db_xref="GeneID:133068209"
ORIGIN      
        1 mraermstll algllvaglc ssvhclpenv tpeeqhkgas vddhslassn tdfafslykk
       61 lalgkpnknv ifsplsisia laflslgarg stlteilegl kfnltetpet eihqgfqhll
      121 qtfnrpsnql qlsvgnamfm peelelldkf rkdaeafyas evlsinfkds eaaikliney
      181 vknkthgkie klfndqdqlt dlillnyiff kaqwttpfdp hrtydsefhv sedtrvqvpm
      241 mtlgletpyf rdeelgctlv eltytsndsa llilpdegkm qdleaklnae tltrwrkslq
      301 pryihklnlp rfsissdykl kdilsqlgmk niftsnanfs gitnehklav sqvvhkavld
      361 vgeegtegaa vtavlvvgts litnaltisf nrpflisilh kdtqsiiflg kvtnpkea
//
LOCUS       XP_061015343             418 aa            linear   MAM 02-DEC-2023
DEFINITION  serpin A3-7-like [Dama dama].
ACCESSION   XP_061015343
VERSION     XP_061015343.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159360.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..418
                     /product="serpin A3-7-like"
                     /calculated_mol_wt=46586
     Region          36..416
                     /region_name="serpinA3_A1AC"
                     /note="serpin family A member 3, alpha 1-antichymotrypsin;
                     cd19551"
                     /db_xref="CDD:381019"
     Site            order(363..375,377..381,385..393)
                     /site_type="other"
                     /note="reactive center loop (RCL)"
                     /db_xref="CDD:381019"
     CDS             1..418
                     /gene="LOC133068209"
                     /coded_by="XM_061159360.1:39..1295"
                     /db_xref="GeneID:133068209"
ORIGIN      
        1 mraermstll algllvaglc ssvhclpenv tpeeqhkgas vddhslassn tdfafslykk
       61 lalgkpnknv ifsplsisia laflslgarg stlteilegl kfnltetpet eihqgfqhll
      121 qtfnrpsnql qlsvgnamfm peelelldkf rkdaeafyas evlsinfkds eaaikliney
      181 vknkthgkie klfndqdqlt dlillnyiff kaqwttpfdp hrtydsefhv sedtrvqvpm
      241 mtlgletpyf rdeelgctlv eltytsndsa llilpdegkm qdleaklnae tltrwrkslq
      301 pryihklnlp rfsissdykl kdilsqlgmk niftsnanfs gitnehklav sqvvhkavld
      361 vgeegtegaa vtavlvvgts litnaltisf nrpflisilh kdtqsiiflg kvtnpkea
//
LOCUS       XP_061015344             407 aa            linear   MAM 02-DEC-2023
DEFINITION  serpin A3-1-like [Dama dama].
ACCESSION   XP_061015344
VERSION     XP_061015344.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159361.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..407
                     /product="serpin A3-1-like"
                     /calculated_mol_wt=45714
     Region          28..405
                     /region_name="serpinA3_A1AC"
                     /note="serpin family A member 3, alpha 1-antichymotrypsin;
                     cd19551"
                     /db_xref="CDD:381019"
     Site            order(354..366,368..372,374..382)
                     /site_type="other"
                     /note="reactive center loop (RCL)"
                     /db_xref="CDD:381019"
     CDS             1..407
                     /gene="LOC133068210"
                     /coded_by="XM_061159361.1:154..1377"
                     /db_xref="GeneID:133068210"
ORIGIN      
        1 mspflalgll lagicnvhcl penvmvkdqh rrvddhtlas sntdfafsly kqlalenpnk
       61 nvifsplsis ialaflslga rgstlteile glkfnlmeiq ekeihqgfkh llqtlnrpsn
      121 qlqlsvgnam fvqeelelld kfiedarvly sseafstnfr dpeaakrlin eyvknktqgk
      181 ieelfkflsp rtvlvlvnyi yfkaqwktpf dpkhtqqaef hvsenktvev pmmtldlktp
      241 yfrdeelgct lveltytsnd sallilpdeg kmqdleakln retltrwrgs lqpsrihely
      301 lpkfsiksdy elndilsqlg irkiftdadl sgltgagnlv vsqvvhsavl dvdeegtega
      361 aatgisiekt ssrrttvrfd rpfliaivlk dtqsiiflgk vtnpsqa
//
LOCUS       XP_061015345             407 aa            linear   MAM 02-DEC-2023
DEFINITION  serpin A3-1-like [Dama dama].
ACCESSION   XP_061015345
VERSION     XP_061015345.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159362.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..407
                     /product="serpin A3-1-like"
                     /calculated_mol_wt=45714
     Region          28..405
                     /region_name="serpinA3_A1AC"
                     /note="serpin family A member 3, alpha 1-antichymotrypsin;
                     cd19551"
                     /db_xref="CDD:381019"
     Site            order(354..366,368..372,374..382)
                     /site_type="other"
                     /note="reactive center loop (RCL)"
                     /db_xref="CDD:381019"
     CDS             1..407
                     /gene="LOC133068210"
                     /coded_by="XM_061159362.1:86..1309"
                     /db_xref="GeneID:133068210"
ORIGIN      
        1 mspflalgll lagicnvhcl penvmvkdqh rrvddhtlas sntdfafsly kqlalenpnk
       61 nvifsplsis ialaflslga rgstlteile glkfnlmeiq ekeihqgfkh llqtlnrpsn
      121 qlqlsvgnam fvqeelelld kfiedarvly sseafstnfr dpeaakrlin eyvknktqgk
      181 ieelfkflsp rtvlvlvnyi yfkaqwktpf dpkhtqqaef hvsenktvev pmmtldlktp
      241 yfrdeelgct lveltytsnd sallilpdeg kmqdleakln retltrwrgs lqpsrihely
      301 lpkfsiksdy elndilsqlg irkiftdadl sgltgagnlv vsqvvhsavl dvdeegtega
      361 aatgisiekt ssrrttvrfd rpfliaivlk dtqsiiflgk vtnpsqa
//
LOCUS       XP_061015346             407 aa            linear   MAM 02-DEC-2023
DEFINITION  serpin A3-1-like [Dama dama].
ACCESSION   XP_061015346
VERSION     XP_061015346.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159363.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..407
                     /product="serpin A3-1-like"
                     /calculated_mol_wt=45714
     Region          28..405
                     /region_name="serpinA3_A1AC"
                     /note="serpin family A member 3, alpha 1-antichymotrypsin;
                     cd19551"
                     /db_xref="CDD:381019"
     Site            order(354..366,368..372,374..382)
                     /site_type="other"
                     /note="reactive center loop (RCL)"
                     /db_xref="CDD:381019"
     CDS             1..407
                     /gene="LOC133068210"
                     /coded_by="XM_061159363.1:88..1311"
                     /db_xref="GeneID:133068210"
ORIGIN      
        1 mspflalgll lagicnvhcl penvmvkdqh rrvddhtlas sntdfafsly kqlalenpnk
       61 nvifsplsis ialaflslga rgstlteile glkfnlmeiq ekeihqgfkh llqtlnrpsn
      121 qlqlsvgnam fvqeelelld kfiedarvly sseafstnfr dpeaakrlin eyvknktqgk
      181 ieelfkflsp rtvlvlvnyi yfkaqwktpf dpkhtqqaef hvsenktvev pmmtldlktp
      241 yfrdeelgct lveltytsnd sallilpdeg kmqdleakln retltrwrgs lqpsrihely
      301 lpkfsiksdy elndilsqlg irkiftdadl sgltgagnlv vsqvvhsavl dvdeegtega
      361 aatgisiekt ssrrttvrfd rpfliaivlk dtqsiiflgk vtnpsqa
//
LOCUS       XP_061015347            1922 aa            linear   MAM 02-DEC-2023
DEFINITION  endoribonuclease Dicer isoform X1 [Dama dama].
ACCESSION   XP_061015347
VERSION     XP_061015347.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159364.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1922
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1922
                     /product="endoribonuclease Dicer isoform X1"
                     /calculated_mol_wt=218198
     Region          42..239
                     /region_name="DEXHc_dicer"
                     /note="DEXH-box helicase domain of endoribonuclease Dicer;
                     cd18034"
                     /db_xref="CDD:350792"
     Site            order(42..45,48,65..72,113,176,207)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350792"
     Site            order(101..102,125..126,151,153..154,157,182..184)
                     /site_type="other"
                     /note="nucleic acid binding site [nucleotide binding]"
                     /db_xref="CDD:350792"
     Region          271..365
                     /region_name="Dicer_PBD"
                     /note="Partner-binding domain of the endoribonuclease
                     Dicer; cd15903"
                     /db_xref="CDD:277191"
     Site            order(276..277,280,282..283,342..343,346..347,350,
                     353..354,357)
                     /site_type="other"
                     /note="Trbp binding interface [polypeptide binding]"
                     /db_xref="CDD:277191"
     Region          372..564
                     /region_name="SF2_C_dicer"
                     /note="C-terminal helicase domain of the endoribonuclease
                     Dicer; cd18802"
                     /db_xref="CDD:350189"
     Site            order(449..451,521,540,542)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350189"
     Site            order(525,527,552,554)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350189"
     Region          629..717
                     /region_name="Dicer_dimer"
                     /note="Dicer dimerization domain; pfam03368"
                     /db_xref="CDD:460900"
     Region          885..1007
                     /region_name="PAZ_dicer_like"
                     /note="PAZ domain, dicer_like subfamily. Dicer is an RNAse
                     involved in cleaving dsRNA in the RNA interference
                     pathway. It generates dsRNAs which are approximately 20 bp
                     long (siRNAs), which in turn target hydrolysis of
                     homologous RNAs. PAZ domains are named...; cd02843"
                     /db_xref="CDD:239209"
     Site            order(948,961,967,971,989,997,999)
                     /site_type="other"
                     /note="nucleic acid-binding interface [nucleotide
                     binding]"
                     /db_xref="CDD:239209"
     Region          1296..>1387
                     /region_name="RIBOc"
                     /note="Ribonuclease III family; smart00535"
                     /db_xref="CDD:197778"
     Site            order(1313..1314,1317..1318,1321,1324..1325,1328..1329,
                     1331..1333,1343)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238333"
     Region          1682..1846
                     /region_name="RIBOc"
                     /note="Ribonuclease III C terminal domain. This group
                     consists of eukaryotic, bacterial and archeal ribonuclease
                     III (RNAse III) proteins. RNAse III is a double stranded
                     RNA-specific endonuclease. Prokaryotic RNAse III is
                     important in post-transcriptional...; cd00593"
                     /db_xref="CDD:238333"
     Site            order(1702..1703,1706..1707,1710,1713..1714,1717..1718,
                     1720..1722,1732,1820,1831)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238333"
     Site            order(1702,1705,1709,1810,1813)
                     /site_type="active"
                     /db_xref="CDD:238333"
     Site            order(1705,1810,1813)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:238333"
     Region          1851..1913
                     /region_name="DSRM_DICER"
                     /note="double-stranded RNA binding motif of
                     endoribonuclease Dicer and similar proteins; cd10843"
                     /db_xref="CDD:380680"
     Site            order(1851..1852,1854..1855,1858..1859,1862..1863,1867,
                     1872..1874,1876,1878,1895..1898,1901)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:380680"
     CDS             1..1922
                     /gene="DICER1"
                     /coded_by="XM_061159364.1:361..6129"
                     /db_xref="GeneID:133068211"
ORIGIN      
        1 mkspalqpls maglqlmtpa sspmgpffgl pwqqeaihdn iytprkyqve lleaaldhnt
       61 ivclntgsgk tfiavlltke lsyqirgdfn rngkrtvflv nsanqvaqqv savrthsdlk
      121 vgeysnlevs aswtkekwnq eftkhqvlvm tcyvalnvlk ngylslsdin llvfdechla
      181 ildhpyreim klcencpscp rilgltasil ngkcdpeele ekiqklekil ksnaetatdl
      241 vvldrytsqp ceivvdcgpf tdrsglyerl lmeleealnf indcnisvhs kerdstlisk
      301 qilsdcravl vvlgpwcadk vagmmvrelq kyikheqeel hrkfllftdt flrkihalce
      361 ehfspasldl kfvtpkvikl leilrkykpy erqqfesvew ynnrnqdnyv swsdseddee
      421 deeieekekp etnfpspftn ilcgiifver rytavvlnrl ikeagkqdpe layissnfit
      481 ghgigknqpr nkqmeaefrk qeevlrkfra hetnlliats iveegvdipk cnlvvrfdlp
      541 teyrsyvqsk grarapisny vmladtdkik sfeedlktyk aiekilrnkc sksvdtgead
      601 tepvvddddi fppyvlrped gprvtintai ghvnrycarl psdpfthlap kcrtrelpdg
      661 tfystlylpi nsplrasivg ppmscirlae rvvaliccek lhkigelddh lmpvgketvk
      721 yeeeldlhde eetsvpgrpg stkrrqcypk aipeclkesy pkpgqpcyly vigmvlttpl
      781 pdelnfrrrk lyppedttrc fgiltakpip qiphfpvytr sgevtisiel kksgftlslq
      841 mlelitrlhq yifshilrle kpalefkptd adsaycvlpl nvvndsstld idfkfmedie
      901 ksearigips tkysketpfv fkledyqdav iipryrnfdq phrfyvadvy tdltplskfp
      961 speyetfaey yktkynldlt nlnqplldvd htssrlnllt prhlnqkgka lplssaekrk
     1021 akweslqnkq ilvpelcaih pipaslwrka vclpsilyrl hclltaeelr aqtasdagvg
     1081 vrslpvdfry pnldfgwkks idsksfisia nsssaeneny ckhstivvpe naahqganrt
     1141 sslenhdqms vncrtlfses pgklqievst dltainglsy nkslangsyd lanrdfcqgn
     1201 hlnyykqeip vqpttsypiq nlynyenqpk psdectllsn kyldgnants tsdgspvtaa
     1261 vpgtaetgea pldrmaseqs pspgyssrtl gpnpglilqa ltlsnasdgf nlerlemlgd
     1321 sflkhaitty lfctypdahe grlsymrskk vsncnlyrlg kkkglpsrmv vsifdppvnw
     1381 lppgyvvnqd ksntekwekd emtkdcmlan gkldddfeee eeeeedlmwr apkedadded
     1441 dfleydqehi kfidnmlmgs gafvkkisls pfsatdsaye wkmpkksslg slpfssdfed
     1501 fdysswdamc yldpskavee ddfvvgfwnp seencgvdtg kqsisydlht eqciadksia
     1561 dcveallgcy ltscgeraaq lflcslglkv lpvikrtdre kamcltrenf tsqqknlsgs
     1621 raaasgagsr asvlkdleyg clkipprcmf dhpdadrtlr hlisgfenfe kkinyrfknk
     1681 ayllqaftha syhyntitdc yqrleflgda ildylitkhl yedprqhspg vltdlrsalv
     1741 nntifaslav kydyhkyfka vspelfhvid dfvqfqlekn emqgmdselr rseedeekee
     1801 dievpkamgd ifeslagaiy mdsgmslemv wqvyypmmrp liekfsanvp rspvrellem
     1861 epetakfspa ertydgkvrv tvevvgkgkf kgvgrsyria ksaaarralr slkanqpqvp
     1921 ns
//
LOCUS       XP_061015348            1922 aa            linear   MAM 02-DEC-2023
DEFINITION  endoribonuclease Dicer isoform X1 [Dama dama].
ACCESSION   XP_061015348
VERSION     XP_061015348.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159365.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1922
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1922
                     /product="endoribonuclease Dicer isoform X1"
                     /calculated_mol_wt=218198
     Region          42..239
                     /region_name="DEXHc_dicer"
                     /note="DEXH-box helicase domain of endoribonuclease Dicer;
                     cd18034"
                     /db_xref="CDD:350792"
     Site            order(42..45,48,65..72,113,176,207)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350792"
     Site            order(101..102,125..126,151,153..154,157,182..184)
                     /site_type="other"
                     /note="nucleic acid binding site [nucleotide binding]"
                     /db_xref="CDD:350792"
     Region          271..365
                     /region_name="Dicer_PBD"
                     /note="Partner-binding domain of the endoribonuclease
                     Dicer; cd15903"
                     /db_xref="CDD:277191"
     Site            order(276..277,280,282..283,342..343,346..347,350,
                     353..354,357)
                     /site_type="other"
                     /note="Trbp binding interface [polypeptide binding]"
                     /db_xref="CDD:277191"
     Region          372..564
                     /region_name="SF2_C_dicer"
                     /note="C-terminal helicase domain of the endoribonuclease
                     Dicer; cd18802"
                     /db_xref="CDD:350189"
     Site            order(449..451,521,540,542)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350189"
     Site            order(525,527,552,554)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350189"
     Region          629..717
                     /region_name="Dicer_dimer"
                     /note="Dicer dimerization domain; pfam03368"
                     /db_xref="CDD:460900"
     Region          885..1007
                     /region_name="PAZ_dicer_like"
                     /note="PAZ domain, dicer_like subfamily. Dicer is an RNAse
                     involved in cleaving dsRNA in the RNA interference
                     pathway. It generates dsRNAs which are approximately 20 bp
                     long (siRNAs), which in turn target hydrolysis of
                     homologous RNAs. PAZ domains are named...; cd02843"
                     /db_xref="CDD:239209"
     Site            order(948,961,967,971,989,997,999)
                     /site_type="other"
                     /note="nucleic acid-binding interface [nucleotide
                     binding]"
                     /db_xref="CDD:239209"
     Region          1296..>1387
                     /region_name="RIBOc"
                     /note="Ribonuclease III family; smart00535"
                     /db_xref="CDD:197778"
     Site            order(1313..1314,1317..1318,1321,1324..1325,1328..1329,
                     1331..1333,1343)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238333"
     Region          1682..1846
                     /region_name="RIBOc"
                     /note="Ribonuclease III C terminal domain. This group
                     consists of eukaryotic, bacterial and archeal ribonuclease
                     III (RNAse III) proteins. RNAse III is a double stranded
                     RNA-specific endonuclease. Prokaryotic RNAse III is
                     important in post-transcriptional...; cd00593"
                     /db_xref="CDD:238333"
     Site            order(1702..1703,1706..1707,1710,1713..1714,1717..1718,
                     1720..1722,1732,1820,1831)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238333"
     Site            order(1702,1705,1709,1810,1813)
                     /site_type="active"
                     /db_xref="CDD:238333"
     Site            order(1705,1810,1813)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:238333"
     Region          1851..1913
                     /region_name="DSRM_DICER"
                     /note="double-stranded RNA binding motif of
                     endoribonuclease Dicer and similar proteins; cd10843"
                     /db_xref="CDD:380680"
     Site            order(1851..1852,1854..1855,1858..1859,1862..1863,1867,
                     1872..1874,1876,1878,1895..1898,1901)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:380680"
     CDS             1..1922
                     /gene="DICER1"
                     /coded_by="XM_061159365.1:175..5943"
                     /db_xref="GeneID:133068211"
ORIGIN      
        1 mkspalqpls maglqlmtpa sspmgpffgl pwqqeaihdn iytprkyqve lleaaldhnt
       61 ivclntgsgk tfiavlltke lsyqirgdfn rngkrtvflv nsanqvaqqv savrthsdlk
      121 vgeysnlevs aswtkekwnq eftkhqvlvm tcyvalnvlk ngylslsdin llvfdechla
      181 ildhpyreim klcencpscp rilgltasil ngkcdpeele ekiqklekil ksnaetatdl
      241 vvldrytsqp ceivvdcgpf tdrsglyerl lmeleealnf indcnisvhs kerdstlisk
      301 qilsdcravl vvlgpwcadk vagmmvrelq kyikheqeel hrkfllftdt flrkihalce
      361 ehfspasldl kfvtpkvikl leilrkykpy erqqfesvew ynnrnqdnyv swsdseddee
      421 deeieekekp etnfpspftn ilcgiifver rytavvlnrl ikeagkqdpe layissnfit
      481 ghgigknqpr nkqmeaefrk qeevlrkfra hetnlliats iveegvdipk cnlvvrfdlp
      541 teyrsyvqsk grarapisny vmladtdkik sfeedlktyk aiekilrnkc sksvdtgead
      601 tepvvddddi fppyvlrped gprvtintai ghvnrycarl psdpfthlap kcrtrelpdg
      661 tfystlylpi nsplrasivg ppmscirlae rvvaliccek lhkigelddh lmpvgketvk
      721 yeeeldlhde eetsvpgrpg stkrrqcypk aipeclkesy pkpgqpcyly vigmvlttpl
      781 pdelnfrrrk lyppedttrc fgiltakpip qiphfpvytr sgevtisiel kksgftlslq
      841 mlelitrlhq yifshilrle kpalefkptd adsaycvlpl nvvndsstld idfkfmedie
      901 ksearigips tkysketpfv fkledyqdav iipryrnfdq phrfyvadvy tdltplskfp
      961 speyetfaey yktkynldlt nlnqplldvd htssrlnllt prhlnqkgka lplssaekrk
     1021 akweslqnkq ilvpelcaih pipaslwrka vclpsilyrl hclltaeelr aqtasdagvg
     1081 vrslpvdfry pnldfgwkks idsksfisia nsssaeneny ckhstivvpe naahqganrt
     1141 sslenhdqms vncrtlfses pgklqievst dltainglsy nkslangsyd lanrdfcqgn
     1201 hlnyykqeip vqpttsypiq nlynyenqpk psdectllsn kyldgnants tsdgspvtaa
     1261 vpgtaetgea pldrmaseqs pspgyssrtl gpnpglilqa ltlsnasdgf nlerlemlgd
     1321 sflkhaitty lfctypdahe grlsymrskk vsncnlyrlg kkkglpsrmv vsifdppvnw
     1381 lppgyvvnqd ksntekwekd emtkdcmlan gkldddfeee eeeeedlmwr apkedadded
     1441 dfleydqehi kfidnmlmgs gafvkkisls pfsatdsaye wkmpkksslg slpfssdfed
     1501 fdysswdamc yldpskavee ddfvvgfwnp seencgvdtg kqsisydlht eqciadksia
     1561 dcveallgcy ltscgeraaq lflcslglkv lpvikrtdre kamcltrenf tsqqknlsgs
     1621 raaasgagsr asvlkdleyg clkipprcmf dhpdadrtlr hlisgfenfe kkinyrfknk
     1681 ayllqaftha syhyntitdc yqrleflgda ildylitkhl yedprqhspg vltdlrsalv
     1741 nntifaslav kydyhkyfka vspelfhvid dfvqfqlekn emqgmdselr rseedeekee
     1801 dievpkamgd ifeslagaiy mdsgmslemv wqvyypmmrp liekfsanvp rspvrellem
     1861 epetakfspa ertydgkvrv tvevvgkgkf kgvgrsyria ksaaarralr slkanqpqvp
     1921 ns
//
LOCUS       XP_061015349            1922 aa            linear   MAM 02-DEC-2023
DEFINITION  endoribonuclease Dicer isoform X1 [Dama dama].
ACCESSION   XP_061015349
VERSION     XP_061015349.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159366.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1922
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1922
                     /product="endoribonuclease Dicer isoform X1"
                     /calculated_mol_wt=218198
     Region          42..239
                     /region_name="DEXHc_dicer"
                     /note="DEXH-box helicase domain of endoribonuclease Dicer;
                     cd18034"
                     /db_xref="CDD:350792"
     Site            order(42..45,48,65..72,113,176,207)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350792"
     Site            order(101..102,125..126,151,153..154,157,182..184)
                     /site_type="other"
                     /note="nucleic acid binding site [nucleotide binding]"
                     /db_xref="CDD:350792"
     Region          271..365
                     /region_name="Dicer_PBD"
                     /note="Partner-binding domain of the endoribonuclease
                     Dicer; cd15903"
                     /db_xref="CDD:277191"
     Site            order(276..277,280,282..283,342..343,346..347,350,
                     353..354,357)
                     /site_type="other"
                     /note="Trbp binding interface [polypeptide binding]"
                     /db_xref="CDD:277191"
     Region          372..564
                     /region_name="SF2_C_dicer"
                     /note="C-terminal helicase domain of the endoribonuclease
                     Dicer; cd18802"
                     /db_xref="CDD:350189"
     Site            order(449..451,521,540,542)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350189"
     Site            order(525,527,552,554)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350189"
     Region          629..717
                     /region_name="Dicer_dimer"
                     /note="Dicer dimerization domain; pfam03368"
                     /db_xref="CDD:460900"
     Region          885..1007
                     /region_name="PAZ_dicer_like"
                     /note="PAZ domain, dicer_like subfamily. Dicer is an RNAse
                     involved in cleaving dsRNA in the RNA interference
                     pathway. It generates dsRNAs which are approximately 20 bp
                     long (siRNAs), which in turn target hydrolysis of
                     homologous RNAs. PAZ domains are named...; cd02843"
                     /db_xref="CDD:239209"
     Site            order(948,961,967,971,989,997,999)
                     /site_type="other"
                     /note="nucleic acid-binding interface [nucleotide
                     binding]"
                     /db_xref="CDD:239209"
     Region          1296..>1387
                     /region_name="RIBOc"
                     /note="Ribonuclease III family; smart00535"
                     /db_xref="CDD:197778"
     Site            order(1313..1314,1317..1318,1321,1324..1325,1328..1329,
                     1331..1333,1343)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238333"
     Region          1682..1846
                     /region_name="RIBOc"
                     /note="Ribonuclease III C terminal domain. This group
                     consists of eukaryotic, bacterial and archeal ribonuclease
                     III (RNAse III) proteins. RNAse III is a double stranded
                     RNA-specific endonuclease. Prokaryotic RNAse III is
                     important in post-transcriptional...; cd00593"
                     /db_xref="CDD:238333"
     Site            order(1702..1703,1706..1707,1710,1713..1714,1717..1718,
                     1720..1722,1732,1820,1831)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238333"
     Site            order(1702,1705,1709,1810,1813)
                     /site_type="active"
                     /db_xref="CDD:238333"
     Site            order(1705,1810,1813)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:238333"
     Region          1851..1913
                     /region_name="DSRM_DICER"
                     /note="double-stranded RNA binding motif of
                     endoribonuclease Dicer and similar proteins; cd10843"
                     /db_xref="CDD:380680"
     Site            order(1851..1852,1854..1855,1858..1859,1862..1863,1867,
                     1872..1874,1876,1878,1895..1898,1901)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:380680"
     CDS             1..1922
                     /gene="DICER1"
                     /coded_by="XM_061159366.1:186..5954"
                     /db_xref="GeneID:133068211"
ORIGIN      
        1 mkspalqpls maglqlmtpa sspmgpffgl pwqqeaihdn iytprkyqve lleaaldhnt
       61 ivclntgsgk tfiavlltke lsyqirgdfn rngkrtvflv nsanqvaqqv savrthsdlk
      121 vgeysnlevs aswtkekwnq eftkhqvlvm tcyvalnvlk ngylslsdin llvfdechla
      181 ildhpyreim klcencpscp rilgltasil ngkcdpeele ekiqklekil ksnaetatdl
      241 vvldrytsqp ceivvdcgpf tdrsglyerl lmeleealnf indcnisvhs kerdstlisk
      301 qilsdcravl vvlgpwcadk vagmmvrelq kyikheqeel hrkfllftdt flrkihalce
      361 ehfspasldl kfvtpkvikl leilrkykpy erqqfesvew ynnrnqdnyv swsdseddee
      421 deeieekekp etnfpspftn ilcgiifver rytavvlnrl ikeagkqdpe layissnfit
      481 ghgigknqpr nkqmeaefrk qeevlrkfra hetnlliats iveegvdipk cnlvvrfdlp
      541 teyrsyvqsk grarapisny vmladtdkik sfeedlktyk aiekilrnkc sksvdtgead
      601 tepvvddddi fppyvlrped gprvtintai ghvnrycarl psdpfthlap kcrtrelpdg
      661 tfystlylpi nsplrasivg ppmscirlae rvvaliccek lhkigelddh lmpvgketvk
      721 yeeeldlhde eetsvpgrpg stkrrqcypk aipeclkesy pkpgqpcyly vigmvlttpl
      781 pdelnfrrrk lyppedttrc fgiltakpip qiphfpvytr sgevtisiel kksgftlslq
      841 mlelitrlhq yifshilrle kpalefkptd adsaycvlpl nvvndsstld idfkfmedie
      901 ksearigips tkysketpfv fkledyqdav iipryrnfdq phrfyvadvy tdltplskfp
      961 speyetfaey yktkynldlt nlnqplldvd htssrlnllt prhlnqkgka lplssaekrk
     1021 akweslqnkq ilvpelcaih pipaslwrka vclpsilyrl hclltaeelr aqtasdagvg
     1081 vrslpvdfry pnldfgwkks idsksfisia nsssaeneny ckhstivvpe naahqganrt
     1141 sslenhdqms vncrtlfses pgklqievst dltainglsy nkslangsyd lanrdfcqgn
     1201 hlnyykqeip vqpttsypiq nlynyenqpk psdectllsn kyldgnants tsdgspvtaa
     1261 vpgtaetgea pldrmaseqs pspgyssrtl gpnpglilqa ltlsnasdgf nlerlemlgd
     1321 sflkhaitty lfctypdahe grlsymrskk vsncnlyrlg kkkglpsrmv vsifdppvnw
     1381 lppgyvvnqd ksntekwekd emtkdcmlan gkldddfeee eeeeedlmwr apkedadded
     1441 dfleydqehi kfidnmlmgs gafvkkisls pfsatdsaye wkmpkksslg slpfssdfed
     1501 fdysswdamc yldpskavee ddfvvgfwnp seencgvdtg kqsisydlht eqciadksia
     1561 dcveallgcy ltscgeraaq lflcslglkv lpvikrtdre kamcltrenf tsqqknlsgs
     1621 raaasgagsr asvlkdleyg clkipprcmf dhpdadrtlr hlisgfenfe kkinyrfknk
     1681 ayllqaftha syhyntitdc yqrleflgda ildylitkhl yedprqhspg vltdlrsalv
     1741 nntifaslav kydyhkyfka vspelfhvid dfvqfqlekn emqgmdselr rseedeekee
     1801 dievpkamgd ifeslagaiy mdsgmslemv wqvyypmmrp liekfsanvp rspvrellem
     1861 epetakfspa ertydgkvrv tvevvgkgkf kgvgrsyria ksaaarralr slkanqpqvp
     1921 ns
//
LOCUS       XP_061015350            1892 aa            linear   MAM 02-DEC-2023
DEFINITION  endoribonuclease Dicer isoform X2 [Dama dama].
ACCESSION   XP_061015350
VERSION     XP_061015350.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159367.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1892
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1892
                     /product="endoribonuclease Dicer isoform X2"
                     /calculated_mol_wt=214781
     Region          19..209
                     /region_name="DEXHc_dicer"
                     /note="DEXH-box helicase domain of endoribonuclease Dicer;
                     cd18034"
                     /db_xref="CDD:350792"
     Site            order(71..72,95..96,121,123..124,127,152..154)
                     /site_type="other"
                     /note="nucleic acid binding site [nucleotide binding]"
                     /db_xref="CDD:350792"
     Region          241..335
                     /region_name="Dicer_PBD"
                     /note="Partner-binding domain of the endoribonuclease
                     Dicer; cd15903"
                     /db_xref="CDD:277191"
     Site            order(246..247,250,252..253,312..313,316..317,320,
                     323..324,327)
                     /site_type="other"
                     /note="Trbp binding interface [polypeptide binding]"
                     /db_xref="CDD:277191"
     Region          342..534
                     /region_name="SF2_C_dicer"
                     /note="C-terminal helicase domain of the endoribonuclease
                     Dicer; cd18802"
                     /db_xref="CDD:350189"
     Site            order(419..421,491,510,512)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350189"
     Site            order(495,497,522,524)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350189"
     Region          599..687
                     /region_name="Dicer_dimer"
                     /note="Dicer dimerization domain; pfam03368"
                     /db_xref="CDD:460900"
     Region          855..977
                     /region_name="PAZ_dicer_like"
                     /note="PAZ domain, dicer_like subfamily. Dicer is an RNAse
                     involved in cleaving dsRNA in the RNA interference
                     pathway. It generates dsRNAs which are approximately 20 bp
                     long (siRNAs), which in turn target hydrolysis of
                     homologous RNAs. PAZ domains are named...; cd02843"
                     /db_xref="CDD:239209"
     Site            order(918,931,937,941,959,967,969)
                     /site_type="other"
                     /note="nucleic acid-binding interface [nucleotide
                     binding]"
                     /db_xref="CDD:239209"
     Region          1266..>1357
                     /region_name="RIBOc"
                     /note="Ribonuclease III family; smart00535"
                     /db_xref="CDD:197778"
     Site            order(1283..1284,1287..1288,1291,1294..1295,1298..1299,
                     1301..1303,1313)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238333"
     Region          1652..1816
                     /region_name="RIBOc"
                     /note="Ribonuclease III C terminal domain. This group
                     consists of eukaryotic, bacterial and archeal ribonuclease
                     III (RNAse III) proteins. RNAse III is a double stranded
                     RNA-specific endonuclease. Prokaryotic RNAse III is
                     important in post-transcriptional...; cd00593"
                     /db_xref="CDD:238333"
     Site            order(1672..1673,1676..1677,1680,1683..1684,1687..1688,
                     1690..1692,1702,1790,1801)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238333"
     Site            order(1672,1675,1679,1780,1783)
                     /site_type="active"
                     /db_xref="CDD:238333"
     Site            order(1675,1780,1783)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:238333"
     Region          1821..1883
                     /region_name="DSRM_DICER"
                     /note="double-stranded RNA binding motif of
                     endoribonuclease Dicer and similar proteins; cd10843"
                     /db_xref="CDD:380680"
     Site            order(1821..1822,1824..1825,1828..1829,1832..1833,1837,
                     1842..1844,1846,1848,1865..1868,1871)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:380680"
     CDS             1..1892
                     /gene="DICER1"
                     /coded_by="XM_061159367.1:262..5940"
                     /db_xref="GeneID:133068211"
ORIGIN      
        1 mskcssdnsn teisniktve lleaaldhnt ivclntgsgk tfiavlltke lsyqirgdfn
       61 rngkrtvflv nsanqvaqqv savrthsdlk vgeysnlevs aswtkekwnq eftkhqvlvm
      121 tcyvalnvlk ngylslsdin llvfdechla ildhpyreim klcencpscp rilgltasil
      181 ngkcdpeele ekiqklekil ksnaetatdl vvldrytsqp ceivvdcgpf tdrsglyerl
      241 lmeleealnf indcnisvhs kerdstlisk qilsdcravl vvlgpwcadk vagmmvrelq
      301 kyikheqeel hrkfllftdt flrkihalce ehfspasldl kfvtpkvikl leilrkykpy
      361 erqqfesvew ynnrnqdnyv swsdseddee deeieekekp etnfpspftn ilcgiifver
      421 rytavvlnrl ikeagkqdpe layissnfit ghgigknqpr nkqmeaefrk qeevlrkfra
      481 hetnlliats iveegvdipk cnlvvrfdlp teyrsyvqsk grarapisny vmladtdkik
      541 sfeedlktyk aiekilrnkc sksvdtgead tepvvddddi fppyvlrped gprvtintai
      601 ghvnrycarl psdpfthlap kcrtrelpdg tfystlylpi nsplrasivg ppmscirlae
      661 rvvaliccek lhkigelddh lmpvgketvk yeeeldlhde eetsvpgrpg stkrrqcypk
      721 aipeclkesy pkpgqpcyly vigmvlttpl pdelnfrrrk lyppedttrc fgiltakpip
      781 qiphfpvytr sgevtisiel kksgftlslq mlelitrlhq yifshilrle kpalefkptd
      841 adsaycvlpl nvvndsstld idfkfmedie ksearigips tkysketpfv fkledyqdav
      901 iipryrnfdq phrfyvadvy tdltplskfp speyetfaey yktkynldlt nlnqplldvd
      961 htssrlnllt prhlnqkgka lplssaekrk akweslqnkq ilvpelcaih pipaslwrka
     1021 vclpsilyrl hclltaeelr aqtasdagvg vrslpvdfry pnldfgwkks idsksfisia
     1081 nsssaeneny ckhstivvpe naahqganrt sslenhdqms vncrtlfses pgklqievst
     1141 dltainglsy nkslangsyd lanrdfcqgn hlnyykqeip vqpttsypiq nlynyenqpk
     1201 psdectllsn kyldgnants tsdgspvtaa vpgtaetgea pldrmaseqs pspgyssrtl
     1261 gpnpglilqa ltlsnasdgf nlerlemlgd sflkhaitty lfctypdahe grlsymrskk
     1321 vsncnlyrlg kkkglpsrmv vsifdppvnw lppgyvvnqd ksntekwekd emtkdcmlan
     1381 gkldddfeee eeeeedlmwr apkedadded dfleydqehi kfidnmlmgs gafvkkisls
     1441 pfsatdsaye wkmpkksslg slpfssdfed fdysswdamc yldpskavee ddfvvgfwnp
     1501 seencgvdtg kqsisydlht eqciadksia dcveallgcy ltscgeraaq lflcslglkv
     1561 lpvikrtdre kamcltrenf tsqqknlsgs raaasgagsr asvlkdleyg clkipprcmf
     1621 dhpdadrtlr hlisgfenfe kkinyrfknk ayllqaftha syhyntitdc yqrleflgda
     1681 ildylitkhl yedprqhspg vltdlrsalv nntifaslav kydyhkyfka vspelfhvid
     1741 dfvqfqlekn emqgmdselr rseedeekee dievpkamgd ifeslagaiy mdsgmslemv
     1801 wqvyypmmrp liekfsanvp rspvrellem epetakfspa ertydgkvrv tvevvgkgkf
     1861 kgvgrsyria ksaaarralr slkanqpqvp ns
//
LOCUS       XP_061015351            1469 aa            linear   MAM 02-DEC-2023
DEFINITION  endoribonuclease Dicer isoform X3 [Dama dama].
ACCESSION   XP_061015351
VERSION     XP_061015351.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159368.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1469
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1469
                     /product="endoribonuclease Dicer isoform X3"
                     /calculated_mol_wt=167007
     Region          42..239
                     /region_name="DEXHc_dicer"
                     /note="DEXH-box helicase domain of endoribonuclease Dicer;
                     cd18034"
                     /db_xref="CDD:350792"
     Site            order(42..45,48,65..72,113,176,207)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350792"
     Site            order(101..102,125..126,151,153..154,157,182..184)
                     /site_type="other"
                     /note="nucleic acid binding site [nucleotide binding]"
                     /db_xref="CDD:350792"
     Region          271..365
                     /region_name="Dicer_PBD"
                     /note="Partner-binding domain of the endoribonuclease
                     Dicer; cd15903"
                     /db_xref="CDD:277191"
     Site            order(276..277,280,282..283,342..343,346..347,350,
                     353..354,357)
                     /site_type="other"
                     /note="Trbp binding interface [polypeptide binding]"
                     /db_xref="CDD:277191"
     Region          372..564
                     /region_name="SF2_C_dicer"
                     /note="C-terminal helicase domain of the endoribonuclease
                     Dicer; cd18802"
                     /db_xref="CDD:350189"
     Site            order(449..451,521,540,542)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350189"
     Site            order(525,527,552,554)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350189"
     Region          629..717
                     /region_name="Dicer_dimer"
                     /note="Dicer dimerization domain; pfam03368"
                     /db_xref="CDD:460900"
     Region          885..1007
                     /region_name="PAZ_dicer_like"
                     /note="PAZ domain, dicer_like subfamily. Dicer is an RNAse
                     involved in cleaving dsRNA in the RNA interference
                     pathway. It generates dsRNAs which are approximately 20 bp
                     long (siRNAs), which in turn target hydrolysis of
                     homologous RNAs. PAZ domains are named...; cd02843"
                     /db_xref="CDD:239209"
     Site            order(948,961,967,971,989,997,999)
                     /site_type="other"
                     /note="nucleic acid-binding interface [nucleotide
                     binding]"
                     /db_xref="CDD:239209"
     Region          1296..>1387
                     /region_name="RIBOc"
                     /note="Ribonuclease III family; smart00535"
                     /db_xref="CDD:197778"
     Site            order(1313..1314,1317..1318,1321,1324..1325,1328..1329,
                     1331..1333,1343)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238333"
     CDS             1..1469
                     /gene="DICER1"
                     /coded_by="XM_061159368.1:362..4771"
                     /db_xref="GeneID:133068211"
ORIGIN      
        1 mkspalqpls maglqlmtpa sspmgpffgl pwqqeaihdn iytprkyqve lleaaldhnt
       61 ivclntgsgk tfiavlltke lsyqirgdfn rngkrtvflv nsanqvaqqv savrthsdlk
      121 vgeysnlevs aswtkekwnq eftkhqvlvm tcyvalnvlk ngylslsdin llvfdechla
      181 ildhpyreim klcencpscp rilgltasil ngkcdpeele ekiqklekil ksnaetatdl
      241 vvldrytsqp ceivvdcgpf tdrsglyerl lmeleealnf indcnisvhs kerdstlisk
      301 qilsdcravl vvlgpwcadk vagmmvrelq kyikheqeel hrkfllftdt flrkihalce
      361 ehfspasldl kfvtpkvikl leilrkykpy erqqfesvew ynnrnqdnyv swsdseddee
      421 deeieekekp etnfpspftn ilcgiifver rytavvlnrl ikeagkqdpe layissnfit
      481 ghgigknqpr nkqmeaefrk qeevlrkfra hetnlliats iveegvdipk cnlvvrfdlp
      541 teyrsyvqsk grarapisny vmladtdkik sfeedlktyk aiekilrnkc sksvdtgead
      601 tepvvddddi fppyvlrped gprvtintai ghvnrycarl psdpfthlap kcrtrelpdg
      661 tfystlylpi nsplrasivg ppmscirlae rvvaliccek lhkigelddh lmpvgketvk
      721 yeeeldlhde eetsvpgrpg stkrrqcypk aipeclkesy pkpgqpcyly vigmvlttpl
      781 pdelnfrrrk lyppedttrc fgiltakpip qiphfpvytr sgevtisiel kksgftlslq
      841 mlelitrlhq yifshilrle kpalefkptd adsaycvlpl nvvndsstld idfkfmedie
      901 ksearigips tkysketpfv fkledyqdav iipryrnfdq phrfyvadvy tdltplskfp
      961 speyetfaey yktkynldlt nlnqplldvd htssrlnllt prhlnqkgka lplssaekrk
     1021 akweslqnkq ilvpelcaih pipaslwrka vclpsilyrl hclltaeelr aqtasdagvg
     1081 vrslpvdfry pnldfgwkks idsksfisia nsssaeneny ckhstivvpe naahqganrt
     1141 sslenhdqms vncrtlfses pgklqievst dltainglsy nkslangsyd lanrdfcqgn
     1201 hlnyykqeip vqpttsypiq nlynyenqpk psdectllsn kyldgnants tsdgspvtaa
     1261 vpgtaetgea pldrmaseqs pspgyssrtl gpnpglilqa ltlsnasdgf nlerlemlgd
     1321 sflkhaitty lfctypdahe grlsymrskk vsncnlyrlg kkkglpsrmv vsifdppvnw
     1381 lppgyvvnqd ksntekwekd emtnalfvsl lkkmlhrkle nlfviilckv vtikieahpp
     1441 aflpkqktac wlmanwtmtl rrrkrrrrt
//
LOCUS       XP_061015353            1037 aa            linear   MAM 02-DEC-2023
DEFINITION  calmin isoform X1 [Dama dama].
ACCESSION   XP_061015353
VERSION     XP_061015353.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159370.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1037
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1037
                     /product="calmin isoform X1"
                     /calculated_mol_wt=115936
     Region          29..142
                     /region_name="CH_CLMN_rpt1"
                     /note="first calponin homology (CH) domain found in calmin
                     and similar proteins; cd21191"
                     /db_xref="CDD:409040"
     Site            order(34,38,92,94..95,98..99,101,110..118,123,125..126,
                     128..129,132..133,136)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409040"
     Region          186..291
                     /region_name="CH_CLMN_rpt2"
                     /note="second calponin homology (CH) domain found in
                     calmin and similar proteins; cd21245"
                     /db_xref="CDD:409094"
     Site            order(189,193,242,244..245,248..249,251,260..268,275,
                     277..278,280..281,284..285,288)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409094"
     CDS             1..1037
                     /gene="CLMN"
                     /coded_by="XM_061159370.1:12..3125"
                     /db_xref="GeneID:133068213"
ORIGIN      
        1 maaqewdwfq reeligqisd irvqnlqver envqkrtftr winlhlekcn pplevkdlfv
       61 diqdgkilma llevlsgrnl lheykssshr ifrlnniaka lkfledsnvk lvsidaaeia
      121 dgnpslvlgl iwniilffqi keltgnlsrn spssslspgs ggtdsdssfp ptptaersta
      181 isvkdqrkai rtllawvqrk trkygvavqd fagswrsgla flavikaidp slvdmkqale
      241 dsmrenleka fsiahdalhi prllepedim vdtpdeqsiv tyvaqflehf peleaedfvd
      301 sdkeapiest fvriketpse qesavfllte dgeraytvnh eashpppskv fvcdkpedve
      361 epclggvssq elvdsssefm nqiieqvlqg ipgklnstse lapessilss rkdsrrsnsl
      421 pikktvhfea dtykdascsq dpfysadlhf egspgetkel skqdeqvlva dvaeetpkqe
      481 vldileeaas dkvpddvfsv dgeishppts qtsppwngas erasspgdeg hlpsplgent
      541 vmanaleikv kllmveamdk edyfeaiplk askfnsdlid fastsqafne vpsphekkpa
      601 eeevsedhpe rlgkrrgksa hkktdsdeap vkldqpdpck dpgdqdqgys lapeeapvdk
      661 kpevyekakr ksfrrrrrge eegeaeclrg lggelpsnpp sssvsletlh spseegldfk
      721 pspplskisv iphdlfyyph yevplaavle ayaegsedlk neemdleepe gyllnlgare
      781 deaeeaeasq ssfsfsglge dlpqasited aspasepspp pspedhqqre vedsipvqgh
      841 qsqefpnsen vaspleekvm eesisskkke krkhvdhves sifiapgtvr ssddleedtg
      901 dhkvlsrtsh sdssiyirrh tnrslesdhf syvqlrnaad vddrrnrmlt ryntqkltel
      961 ilqfygirad mkreckharm smkanhsgka rlreihssqs dsltqlvqqp dvmyfilflw
     1021 llvyclllfp qldvnrl
//
LOCUS       XP_061015354            1037 aa            linear   MAM 02-DEC-2023
DEFINITION  calmin isoform X1 [Dama dama].
ACCESSION   XP_061015354
VERSION     XP_061015354.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159371.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1037
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1037
                     /product="calmin isoform X1"
                     /calculated_mol_wt=115936
     Region          29..142
                     /region_name="CH_CLMN_rpt1"
                     /note="first calponin homology (CH) domain found in calmin
                     and similar proteins; cd21191"
                     /db_xref="CDD:409040"
     Site            order(34,38,92,94..95,98..99,101,110..118,123,125..126,
                     128..129,132..133,136)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409040"
     Region          186..291
                     /region_name="CH_CLMN_rpt2"
                     /note="second calponin homology (CH) domain found in
                     calmin and similar proteins; cd21245"
                     /db_xref="CDD:409094"
     Site            order(189,193,242,244..245,248..249,251,260..268,275,
                     277..278,280..281,284..285,288)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409094"
     CDS             1..1037
                     /gene="CLMN"
                     /coded_by="XM_061159371.1:12..3125"
                     /db_xref="GeneID:133068213"
ORIGIN      
        1 maaqewdwfq reeligqisd irvqnlqver envqkrtftr winlhlekcn pplevkdlfv
       61 diqdgkilma llevlsgrnl lheykssshr ifrlnniaka lkfledsnvk lvsidaaeia
      121 dgnpslvlgl iwniilffqi keltgnlsrn spssslspgs ggtdsdssfp ptptaersta
      181 isvkdqrkai rtllawvqrk trkygvavqd fagswrsgla flavikaidp slvdmkqale
      241 dsmrenleka fsiahdalhi prllepedim vdtpdeqsiv tyvaqflehf peleaedfvd
      301 sdkeapiest fvriketpse qesavfllte dgeraytvnh eashpppskv fvcdkpedve
      361 epclggvssq elvdsssefm nqiieqvlqg ipgklnstse lapessilss rkdsrrsnsl
      421 pikktvhfea dtykdascsq dpfysadlhf egspgetkel skqdeqvlva dvaeetpkqe
      481 vldileeaas dkvpddvfsv dgeishppts qtsppwngas erasspgdeg hlpsplgent
      541 vmanaleikv kllmveamdk edyfeaiplk askfnsdlid fastsqafne vpsphekkpa
      601 eeevsedhpe rlgkrrgksa hkktdsdeap vkldqpdpck dpgdqdqgys lapeeapvdk
      661 kpevyekakr ksfrrrrrge eegeaeclrg lggelpsnpp sssvsletlh spseegldfk
      721 pspplskisv iphdlfyyph yevplaavle ayaegsedlk neemdleepe gyllnlgare
      781 deaeeaeasq ssfsfsglge dlpqasited aspasepspp pspedhqqre vedsipvqgh
      841 qsqefpnsen vaspleekvm eesisskkke krkhvdhves sifiapgtvr ssddleedtg
      901 dhkvlsrtsh sdssiyirrh tnrslesdhf syvqlrnaad vddrrnrmlt ryntqkltel
      961 ilqfygirad mkreckharm smkanhsgka rlreihssqs dsltqlvqqp dvmyfilflw
     1021 llvyclllfp qldvnrl
//
LOCUS       XP_061015355            1006 aa            linear   MAM 02-DEC-2023
DEFINITION  calmin isoform X2 [Dama dama].
ACCESSION   XP_061015355
VERSION     XP_061015355.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159372.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1006
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1006
                     /product="calmin isoform X2"
                     /calculated_mol_wt=112177
     Region          29..142
                     /region_name="CH_CLMN_rpt1"
                     /note="first calponin homology (CH) domain found in calmin
                     and similar proteins; cd21191"
                     /db_xref="CDD:409040"
     Site            order(34,38,92,94..95,98..99,101,110..118,123,125..126,
                     128..129,132..133,136)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409040"
     Region          186..291
                     /region_name="CH_CLMN_rpt2"
                     /note="second calponin homology (CH) domain found in
                     calmin and similar proteins; cd21245"
                     /db_xref="CDD:409094"
     Site            order(189,193,242,244..245,248..249,251,260..268,275,
                     277..278,280..281,284..285,288)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409094"
     CDS             1..1006
                     /gene="CLMN"
                     /coded_by="XM_061159372.1:12..3032"
                     /db_xref="GeneID:133068213"
ORIGIN      
        1 maaqewdwfq reeligqisd irvqnlqver envqkrtftr winlhlekcn pplevkdlfv
       61 diqdgkilma llevlsgrnl lheykssshr ifrlnniaka lkfledsnvk lvsidaaeia
      121 dgnpslvlgl iwniilffqi keltgnlsrn spssslspgs ggtdsdssfp ptptaersta
      181 isvkdqrkai rtllawvqrk trkygvavqd fagswrsgla flavikaidp slvdmkqale
      241 dsmrenleka fsiahdalhi prllepedim vdtpdeqsiv tyvaqflehf peleaedfvd
      301 sdkeapiest fvriketpse qesavfllte dgeraytvnh eashpppskv fvcdkpedve
      361 epclggvssq elvdsssefm nqiieqvlqg ipgklnstse lapessilss rkdsrrsnsl
      421 pikktvhfea dtykdascsq dpfysadlhf egspgetkel skqdeqvlva dvaeetpkqe
      481 vldileeaas dkvpddvfsv dgeishppts qtsppwngas erasspgdeg hlpsplgent
      541 vmanaleikv kllmveamdk edyfeaiplk askfnsdlid fastsqafne vpsphekkpa
      601 eeevsedhpe rlgkrrgksa hkktdsdeap vkldqpdpck dpgdqdqgys lapeeapvdk
      661 kpevyekakr ksfrrrrrge eegeaeclrg lggelpsnpp sssvsletlh spseegldfk
      721 pspplskisv iphdlfyyph yevplaavle ayaegsedlk neemdleepe gyllnlgare
      781 deaeeaeasq ssfsfsglge dlpqasited aspasepspp pspedhqqre vedsipvqgh
      841 qsqefpnsen vaspleekvm eesisskkke krkhvdhves sifiapgtvr ssddleedtg
      901 dhkvlsrtsh sdssiyirrh tnrslesdhf syvqlrnaad vddrrnrmlt rkanhsgkar
      961 lreihssqsd sltqlvqqpd vmyfilflwl lvyclllfpq ldvnrl
//
LOCUS       XP_061015356             976 aa            linear   MAM 02-DEC-2023
DEFINITION  nesprin-3 [Dama dama].
ACCESSION   XP_061015356
VERSION     XP_061015356.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159373.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..976
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..976
                     /product="nesprin-3"
                     /calculated_mol_wt=111751
     Region          <194..325
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            218..223
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          295..>863
                     /region_name="sbcc"
                     /note="exonuclease SbcC; TIGR00618"
                     /db_xref="CDD:129705"
     Region          <296..>563
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          <947..976
                     /region_name="KASH"
                     /note="Nuclear envelope localization domain; pfam10541"
                     /db_xref="CDD:463142"
     CDS             1..976
                     /gene="SYNE3"
                     /coded_by="XM_061159373.1:91..3021"
                     /db_xref="GeneID:133068214"
ORIGIN      
        1 mtqqpqegfd rsvedarrwm tavqerlqin dntqgprtal earlreteki cqlepegrvk
       61 vdvvlqaaea llacchedqk teilaqlrdi kaqweetvty mthchsriew vwlhwseylr
      121 ardefcrwfq kmtvalappa elqpglkekq wqldhaqvll hnaghqavll drlleeaasl
      181 fhrigdpsvd daaqqrmkae ydavkakaqd rvdlleqvtr ehecfqasvd efqlwlkavv
      241 ervhgcmgrk crlsiqdrls alqgiandfp kgeeslkrlq qqavgviqnt splgaekitr
      301 dleemrdvle klrglweeee grlrdlvksk gaceqqrgrl eaelaefkkd lqrlaeeglg
      361 ttakaatede lvarwrlnsa traalaaeep rvdrlqaqlk ellvspqdpq plsdsvvaai
      421 qeyqrmkaks srlrnavate lwqrfqrhlq dlqlwrelaq rlldvtaslp dppsihtflp
      481 qieaalmess rlkeqltmlq lkkdllgsif gperatalle qvatsvrdrd llhnhllqrk
      541 sklqsllaqh kdfgatfepl qkklsdlqir vqaenglrrd lpekqaqllr lqglqeegmd
      601 lgsqveamrp vfqgnpnhqh kmdqlsadhq alqrsledll egrqqslreh ctfnhellkl
      661 rqwisvitqk leahcgdtap wdaqsweaev erllaefpek eaqlpvmeal grlvmeassl
      721 egaavvqgel eelteswkal rqleesllsl irnqqlqrtt evdsgkkmif tnnipktgfl
      781 ilptdltsrh rrqagllree ggslegcsqp lrnfehwlqe ensklvriia mktataedlr
      841 tretklqele aripegqrlf enllhlrpac sssdeledlr yrwmlykskl kdsshlltqs
      901 ppgeptgfrk taqwrglgsl crkvccvalp lqlllllfll llfllpvgee nrscfltnnf
      961 arsfmlmlry dgpppt
//
LOCUS       XP_061015357             158 aa            linear   MAM 02-DEC-2023
DEFINITION  glutaredoxin-related protein 5, mitochondrial [Dama dama].
ACCESSION   XP_061015357
VERSION     XP_061015357.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159374.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..158
                     /product="glutaredoxin-related protein 5, mitochondrial"
                     /calculated_mol_wt=16672
     Region          46..136
                     /region_name="GRX_PICOT_like"
                     /note="Glutaredoxin (GRX) family, PKC-interacting cousin
                     of TRX (PICOT)-like subfamily; composed of PICOT and
                     GRX-PICOT-like proteins. The non-PICOT members of this
                     family contain only the GRX-like domain, whereas PICOT
                     contains an N-terminal TRX-like domain...; cd03028"
                     /db_xref="CDD:239326"
     Site            order(60,68..70,109..110)
                     /site_type="other"
                     /note="putative GSH binding site [chemical binding]"
                     /db_xref="CDD:239326"
     Site            order(68,71)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239326"
     CDS             1..158
                     /gene="GLRX5"
                     /coded_by="XM_061159374.1:27..503"
                     /db_xref="GeneID:133068215"
ORIGIN      
        1 msgslgraaa aaatallrwg rsaggglrgp gvraagsggs gssehldalv kkdkvvvflk
       61 gtpeqpqcgf snavvqilrl hgvrdyaayn vlddpqlrqg ikdysnwpti pqvylngefv
      121 ggcdillqmh qngdlveelk klgirsalld etkdqdsk
//
LOCUS       XP_061015358            2078 aa            linear   MAM 02-DEC-2023
DEFINITION  autophagy-related protein 2 homolog B isoform X1 [Dama dama].
ACCESSION   XP_061015358
VERSION     XP_061015358.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159375.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2078
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2078
                     /product="autophagy-related protein 2 homolog B isoform
                     X1"
                     /calculated_mol_wt=232037
     Region          11..>105
                     /region_name="Chorein_N"
                     /note="N-terminal region of Chorein or VPS13; pfam12624"
                     /db_xref="CDD:463646"
     Region          17..>234
                     /region_name="MRS6"
                     /note="Vacuolar protein sorting-associated protein
                     [Intracellular trafficking and secretion]; COG5043"
                     /db_xref="CDD:227376"
     Region          1980..2074
                     /region_name="ATG_C"
                     /note="Autophagy-related protein C terminal domain;
                     pfam09333"
                     /db_xref="CDD:462761"
     CDS             1..2078
                     /gene="ATG2B"
                     /coded_by="XM_061159375.1:460..6696"
                     /db_xref="GeneID:133068219"
ORIGIN      
        1 mpwpfsesik kracryllqr ylghflqekl sleqlsldly qgtgslaqvp ldkwclneil
       61 esadaplevt egfiqsisls vpwgsllqdn calevrglem vfrprprlas gsepmywssf
      121 mtssmqlake clsqkltdeq gegsqpfegl ekfaetietv lrrvkvtfid tvlriehvpe
      181 nsktgtalei riertmycde tadessginv hqptafahkl lqlsgvslfw defsasakss
      241 pvcstapvet epklspswnp kivyephpql trslpevaps dpvqigglsg rlelsltlkq
      301 nevlpgakld idgqidsihl flsprqvhll ldmlaaiagp ensskiglad kdrknrpmqq
      361 edeyriqmel nryylrkdsl sagvsseqsf yetetartps sreeevffsm admdmshsls
      421 slpplgeppn mdlelsltst ytntpagspl sttvlqptwg dfldhhkeqp vrgsalpsnl
      481 vhpaslqkta lpsrsvsvde srpelifrva vgtfsisvlh idplsppess lnvnpltpma
      541 tafftcieki dpaqfstedf ksfravfaea cshdhlrfig tgikvsyeqr qrsasryfst
      601 dmsigqvell eclfptdfhs vpphytellm fhskertdsh ppvclqlhyk hsenkgpqgs
      661 qarlssvpqk aelqvklnpv fceldisivd rlnsllqpqk lttvemmash mytsynkhis
      721 lhkaftevfl ddshnpancr vsvqvatpal nlsvrfpipd lrsdqergpw fkkslqkeil
      781 hlaftdlefk teflggstpe qvkleltfre lvgsfqedkg essikffhva sggdgdttss
      841 ddfdwprivl kvnppamhsi lermaaeeee esdghyqeee eggahslkdv cdlrrpapsp
      901 fssrrvmfen eqmvmpgdpv emtefqnkai snshyvlelt lpnihitlpn ksfyeklynr
      961 ifndlllwep tapspvetfe nisygiglsv asqlintfsk dsfspfkstv hydeesgsee
     1021 etlqyfstvd pnyrsrrkkk ldsqnknsqs flsvllsinh glmavftdvk qgngdllenk
     1081 hgefwlefnn gslfcvtrye gfddkhyvcl hcssfslyhk givdgavpst etrlpsstrp
     1141 hwleptiyss eedglsrass dgvggdtlnm lsvavkilsd ksesntkefl iavglkgatl
     1201 qhrmlpsgls wheqilyfln iadepvlgyn pptsfttfhv hlwscaldyr plylpirsll
     1261 tvetfsvsss valdkssstl riildeaalh lsdkcntvti nlnrdyvrvm dmglleltit
     1321 avksdsngeq tephfelhcs sdvvhirtcs dscaalmnli qyiasygdlh atnkadvkpg
     1381 apqrkvkvds vgrsssrgpv lpeadqqilr dlmsdameei dmqeaassvk pqsngvsdek
     1441 sqvqepccsd lflfpdesgn vsqepgptyt sfthhlisda vtgvptendd fcilfaprat
     1501 iqekeeepvv kimvddaivi renyfslpvk ktdtskaplh fpvpvvrylv kevslvwhly
     1561 ggkdfgtapp tspaksyisp hsspshtptr hghnmvcggk grnhdflmei qlskvkfqhe
     1621 vyppckpera sslveqpvsr qvfivqdlei rdrlatsqmn kflylycske mprkahsnml
     1681 tikalhvrpe sgrspqeccl rvslmplrln idqdalfflk dfftslstev ellmtpdpev
     1741 kkspgadvtc slprhlstsk epnlglsfpg pkqpspngsa nsvqavngee ekdfspeeal
     1801 fsdqpvffre frftsevpir ldyhgkhvsm dqgtlagili glaqlncsel klkrlfyrhg
     1861 llgvdklfsy aitewltdik knqlpgilgg vgpmhslvql vqglkdlvwl pieqyrkdgr
     1921 ivrgfqrgaa sfgtstamaa leltnrmvqt iqaaaetayd mvspgtlsie pkkvrrfphh
     1981 rlahqpvdlr egvakaysvv kegiadtaqt iyetaarehe srgvtgavge vlrqlppavv
     2041 kplivateat snvlggmrnq irpdvrqdes qkwrhgdd
//
LOCUS       XP_061015359            2076 aa            linear   MAM 02-DEC-2023
DEFINITION  autophagy-related protein 2 homolog B isoform X2 [Dama dama].
ACCESSION   XP_061015359
VERSION     XP_061015359.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159376.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2076
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..2076
                     /product="autophagy-related protein 2 homolog B isoform
                     X2"
                     /calculated_mol_wt=231810
     Region          11..>105
                     /region_name="Chorein_N"
                     /note="N-terminal region of Chorein or VPS13; pfam12624"
                     /db_xref="CDD:463646"
     Region          17..>234
                     /region_name="MRS6"
                     /note="Vacuolar protein sorting-associated protein
                     [Intracellular trafficking and secretion]; COG5043"
                     /db_xref="CDD:227376"
     Region          1978..2072
                     /region_name="ATG_C"
                     /note="Autophagy-related protein C terminal domain;
                     pfam09333"
                     /db_xref="CDD:462761"
     CDS             1..2076
                     /gene="ATG2B"
                     /coded_by="XM_061159376.1:461..6691"
                     /db_xref="GeneID:133068219"
ORIGIN      
        1 mpwpfsesik kracryllqr ylghflqekl sleqlsldly qgtgslaqvp ldkwclneil
       61 esadaplevt egfiqsisls vpwgsllqdn calevrglem vfrprprlas gsepmywssf
      121 mtssmqlake clsqkltdeq gegsqpfegl ekfaetietv lrrvkvtfid tvlriehvpe
      181 nsktgtalei riertmycde tadessginv hqptafahkl lqlsgvslfw defsasakss
      241 pvcstapvet epklspswnp kivyephpql trslpevaps dpvqigglsg rlelsltlkq
      301 nevlpgakld idgqidsihl flsprqvhll ldmlaaiagp ensskiglad kdrknrpmqq
      361 edeyriqmel nryylrkdsl sagvsseqsf yetetartps sreeevffsm admdmshsls
      421 slpplgeppn mdlelsltst ytntpagspl sttvlqptwg dfldhhkeqp vrgsalpsnl
      481 vhpaslqkta lpsrsvsvde srpelifrva vgtfsisvlh idplsppess lnvnpltpma
      541 tafftcieki dpaqfstedf ksfravfaea cshdhlrfig tgikvsyeqr qrsasryfst
      601 dmsigqvell eclfptdfhs vpphytellm fhskertdsh ppvclqlhyk hsenkgpqgs
      661 qarlssvpqk aelqvklnpv fceldisivd rlnsllqpqk lttvemmash mytsynkhis
      721 lhkaftevfl ddshnpancr vsvqvatpal nlsvrfpipd lrsdqergpw fkkslqkeil
      781 hlaftdlefk teflggstpe qvkleltfre lvgsfqedkg essikffhva sggdgdttss
      841 ddfdwprivl kvnppamhsi lermaaeeee esdghyqeee eggahslkdv cdlrrpapsp
      901 fssrrvmfen eqmvmpgdpv emtefqnkai snshyvlelt lpnihitlpn ksfyeklynr
      961 ifndlllwep tapspvetfe nisygiglsv asqlintfsk dsfspfkstv hydeesgsee
     1021 etlqyfstvd pnyrsrrkkk ldsqnknsqs flsvllsinh glmavftdvk qgngdllenk
     1081 hgefwlefnn gslfcvtrye gfddkhyvcl hcssfslyhk givdgavpst etrlpsstrp
     1141 hwleptiyss eedglsrass dgvggdtlnm lsvavkilsd ksesntkefl iavglkgatl
     1201 qhrmlpsgls wheqilyfln iadepvlgyn pptsfttfhv hlwscaldyr plylpirsll
     1261 tvetfsvsss valdkssstl riildeaalh lsdkcntvti nlnrdyvrvm dmglleltit
     1321 avksdsngeq tephfelhcs sdvvhirtcs dscaalmnli qyiasygdlh atnkadvkpg
     1381 apqrkvdsvg rsssrgpvlp eadqqilrdl msdameeidm qeaassvkpq sngvsdeksq
     1441 vqepccsdlf lfpdesgnvs qepgptytsf thhlisdavt gvptenddfc ilfapratiq
     1501 ekeeepvvki mvddaivire nyfslpvkkt dtskaplhfp vpvvrylvke vslvwhlygg
     1561 kdfgtappts paksyisphs spshtptrhg hnmvcggkgr nhdflmeiql skvkfqhevy
     1621 ppckperass lveqpvsrqv fivqdleird rlatsqmnkf lylycskemp rkahsnmlti
     1681 kalhvrpesg rspqecclrv slmplrlnid qdalfflkdf ftslstevel lmtpdpevkk
     1741 spgadvtcsl prhlstskep nlglsfpgpk qpspngsans vqavngeeek dfspeealfs
     1801 dqpvffrefr ftsevpirld yhgkhvsmdq gtlagiligl aqlncselkl krlfyrhgll
     1861 gvdklfsyai tewltdikkn qlpgilggvg pmhslvqlvq glkdlvwlpi eqyrkdgriv
     1921 rgfqrgaasf gtstamaale ltnrmvqtiq aaaetaydmv spgtlsiepk kvrrfphhrl
     1981 ahqpvdlreg vakaysvvke giadtaqtiy etaarehesr gvtgavgevl rqlppavvkp
     2041 livateatsn vlggmrnqir pdvrqdesqk wrhgdd
//
LOCUS       XP_061015360            1979 aa            linear   MAM 02-DEC-2023
DEFINITION  autophagy-related protein 2 homolog B isoform X3 [Dama dama].
ACCESSION   XP_061015360
VERSION     XP_061015360.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159377.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1979
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1979
                     /product="autophagy-related protein 2 homolog B isoform
                     X3"
                     /calculated_mol_wt=220829
     Region          1881..1975
                     /region_name="ATG_C"
                     /note="Autophagy-related protein C terminal domain;
                     pfam09333"
                     /db_xref="CDD:462761"
     CDS             1..1979
                     /gene="ATG2B"
                     /coded_by="XM_061159377.1:585..6524"
                     /db_xref="GeneID:133068219"
ORIGIN      
        1 mvfrprprla sgsepmywss fmtssmqlak eclsqkltde qgegsqpfeg lekfaetiet
       61 vlrrvkvtfi dtvlriehvp ensktgtale iriertmycd etadessgin vhqptafahk
      121 llqlsgvslf wdefsasaks spvcstapve tepklspswn pkivyephpq ltrslpevap
      181 sdpvqiggls grlelsltlk qnevlpgakl didgqidsih lflsprqvhl lldmlaaiag
      241 pensskigla dkdrknrpmq qedeyriqme lnryylrkds lsagvsseqs fyetetartp
      301 ssreeevffs madmdmshsl sslpplgepp nmdlelslts tytntpagsp lsttvlqptw
      361 gdfldhhkeq pvrgsalpsn lvhpaslqkt alpsrsvsvd esrpelifrv avgtfsisvl
      421 hidplsppes slnvnpltpm atafftciek idpaqfsted fksfravfae acshdhlrfi
      481 gtgikvsyeq rqrsasryfs tdmsigqvel leclfptdfh svpphytell mfhskertds
      541 hppvclqlhy khsenkgpqg sqarlssvpq kaelqvklnp vfceldisiv drlnsllqpq
      601 klttvemmas hmytsynkhi slhkaftevf lddshnpanc rvsvqvatpa lnlsvrfpip
      661 dlrsdqergp wfkkslqkei lhlaftdlef kteflggstp eqvkleltfr elvgsfqedk
      721 gessikffhv asggdgdtts sddfdwpriv lkvnppamhs ilermaaeee eesdghyqee
      781 eeggahslkd vcdlrrpaps pfssrrvmfe neqmvmpgdp vemtefqnka isnshyvlel
      841 tlpnihitlp nksfyeklyn rifndlllwe ptapspvetf enisygigls vasqlintfs
      901 kdsfspfkst vhydeesgse eetlqyfstv dpnyrsrrkk kldsqnknsq sflsvllsin
      961 hglmavftdv kqgngdllen khgefwlefn ngslfcvtry egfddkhyvc lhcssfslyh
     1021 kgivdgavps tetrlpsstr phwleptiys seedglsras sdgvggdtln mlsvavkils
     1081 dksesntkef liavglkgat lqhrmlpsgl swheqilyfl niadepvlgy npptsfttfh
     1141 vhlwscaldy rplylpirsl ltvetfsvss svaldkssst lriildeaal hlsdkcntvt
     1201 inlnrdyvrv mdmgllelti tavksdsnge qtephfelhc ssdvvhirtc sdscaalmnl
     1261 iqyiasygdl hatnkadvkp gapqrkvkvd svgrsssrgp vlpeadqqil rdlmsdamee
     1321 idmqeaassv kpqsngvsde ksqvqepccs dlflfpdesg nvsqepgpty tsfthhlisd
     1381 avtgvptend dfcilfapra tiqekeeepv vkimvddaiv irenyfslpv kktdtskapl
     1441 hfpvpvvryl vkevslvwhl yggkdfgtap ptspaksyis phsspshtpt rhghnmvcgg
     1501 kgrnhdflme iqlskvkfqh evyppckper asslveqpvs rqvfivqdle irdrlatsqm
     1561 nkflylycsk emprkahsnm ltikalhvrp esgrspqecc lrvslmplrl nidqdalffl
     1621 kdfftslste vellmtpdpe vkkspgadvt cslprhlsts kepnlglsfp gpkqpspngs
     1681 ansvqavnge eekdfspeea lfsdqpvffr efrftsevpi rldyhgkhvs mdqgtlagil
     1741 iglaqlncse lklkrlfyrh gllgvdklfs yaitewltdi kknqlpgilg gvgpmhslvq
     1801 lvqglkdlvw lpieqyrkdg rivrgfqrga asfgtstama aleltnrmvq tiqaaaetay
     1861 dmvspgtlsi epkkvrrfph hrlahqpvdl regvakaysv vkegiadtaq tiyetaareh
     1921 esrgvtgavg evlrqlppav vkplivatea tsnvlggmrn qirpdvrqde sqkwrhgdd
//
LOCUS       XP_061015361             388 aa            linear   MAM 02-DEC-2023
DEFINITION  B2 bradykinin receptor [Dama dama].
ACCESSION   XP_061015361
VERSION     XP_061015361.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159378.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..388
                     /product="B2 bradykinin receptor"
                     /calculated_mol_wt=44024
     Region          61..346
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          63..87
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          96..117
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          134..156
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          179..195
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          225..248
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          272..294
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          314..339
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..388
                     /gene="BDKRB2"
                     /coded_by="XM_061159378.1:68..1234"
                     /db_xref="GeneID:133068221"
ORIGIN      
        1 mfsawkrpmf psihedtvpt tasfgakmfn ltsqvlepal ngtlpesssc fqsdwwnlln
       61 tiqppflwil fllatlenif vlsvfclhks sctvaeiylg nlavadlila fglpfwavti
      121 annfdwlfge alcrvvntml ymnlyssicf lmlvsidryl alvktmsmgr mrrvpwakly
      181 slviwgcall lsspmlafrt mqeynaeghn vtacviryps rnwevftnil lnsvgfllpl
      241 svitfctvqi mqvlrnnemq kfkeiqterk atllvlavll lfvvcwlpfq vstlldtllr
      301 lqvlsgcwne yvidvftqis sfvaysnscl nplvyvivgk rfrkksrevy trlcrpggcg
      361 spepsqtens mgtlrtsisv erhihkls
//
LOCUS       XP_061015363             352 aa            linear   MAM 02-DEC-2023
DEFINITION  B1 bradykinin receptor [Dama dama].
ACCESSION   XP_061015363
VERSION     XP_061015363.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159380.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..352
                     /product="B1 bradykinin receptor"
                     /calculated_mol_wt=40120
     Region          37..322
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          39..63
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          72..93
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          110..132
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          155..171
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          199..222
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          248..270
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          290..315
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..352
                     /gene="BDKRB1"
                     /coded_by="XM_061159380.1:304..1362"
                     /db_xref="GeneID:133068222"
ORIGIN      
        1 maswallelq tpnqsqplsp natscdeawe awallhrvlp tcvlsiclcg llgnlfvlsv
       61 flvarqrlnv aeiylanlaa sdlvfvlglp fwaenirnef nwpfgaflcr lvngvikanl
      121 fisiflvvai sqdryrvlvh pmasrrrrrr rwaqgtclli wavgallslp tfllrsvkav
      181 pelnvsacvl ryphdawpfa rmveltllsf llplaaiiff nyhilaalrg qrdisrmrcg
      241 gprdgrttal iltlvsafll cwapyhffaf leflfqvrav rgcfwenfid lglqcanffa
      301 fvnsclnpvi yvfwgqlfrt kvwelykrci pgsltpvass hrketlqlfw rn
//
LOCUS       XP_061015364             352 aa            linear   MAM 02-DEC-2023
DEFINITION  B1 bradykinin receptor [Dama dama].
ACCESSION   XP_061015364
VERSION     XP_061015364.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159381.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..352
                     /product="B1 bradykinin receptor"
                     /calculated_mol_wt=40120
     Region          37..322
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          39..63
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          72..93
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          110..132
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          155..171
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          199..222
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          248..270
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          290..315
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..352
                     /gene="BDKRB1"
                     /coded_by="XM_061159381.1:274..1332"
                     /db_xref="GeneID:133068222"
ORIGIN      
        1 maswallelq tpnqsqplsp natscdeawe awallhrvlp tcvlsiclcg llgnlfvlsv
       61 flvarqrlnv aeiylanlaa sdlvfvlglp fwaenirnef nwpfgaflcr lvngvikanl
      121 fisiflvvai sqdryrvlvh pmasrrrrrr rwaqgtclli wavgallslp tfllrsvkav
      181 pelnvsacvl ryphdawpfa rmveltllsf llplaaiiff nyhilaalrg qrdisrmrcg
      241 gprdgrttal iltlvsafll cwapyhffaf leflfqvrav rgcfwenfid lglqcanffa
      301 fvnsclnpvi yvfwgqlfrt kvwelykrci pgsltpvass hrketlqlfw rn
//
LOCUS       XP_061015365             352 aa            linear   MAM 02-DEC-2023
DEFINITION  B1 bradykinin receptor [Dama dama].
ACCESSION   XP_061015365
VERSION     XP_061015365.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159382.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..352
                     /product="B1 bradykinin receptor"
                     /calculated_mol_wt=40120
     Region          37..322
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          39..63
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          72..93
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          110..132
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          155..171
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          199..222
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          248..270
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          290..315
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..352
                     /gene="BDKRB1"
                     /coded_by="XM_061159382.1:266..1324"
                     /db_xref="GeneID:133068222"
ORIGIN      
        1 maswallelq tpnqsqplsp natscdeawe awallhrvlp tcvlsiclcg llgnlfvlsv
       61 flvarqrlnv aeiylanlaa sdlvfvlglp fwaenirnef nwpfgaflcr lvngvikanl
      121 fisiflvvai sqdryrvlvh pmasrrrrrr rwaqgtclli wavgallslp tfllrsvkav
      181 pelnvsacvl ryphdawpfa rmveltllsf llplaaiiff nyhilaalrg qrdisrmrcg
      241 gprdgrttal iltlvsafll cwapyhffaf leflfqvrav rgcfwenfid lglqcanffa
      301 fvnsclnpvi yvfwgqlfrt kvwelykrci pgsltpvass hrketlqlfw rn
//
LOCUS       XP_061015366             352 aa            linear   MAM 02-DEC-2023
DEFINITION  B1 bradykinin receptor [Dama dama].
ACCESSION   XP_061015366
VERSION     XP_061015366.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159383.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..352
                     /product="B1 bradykinin receptor"
                     /calculated_mol_wt=40120
     Region          37..322
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          39..63
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          72..93
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          110..132
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          155..171
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          199..222
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          248..270
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          290..315
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..352
                     /gene="BDKRB1"
                     /coded_by="XM_061159383.1:280..1338"
                     /db_xref="GeneID:133068222"
ORIGIN      
        1 maswallelq tpnqsqplsp natscdeawe awallhrvlp tcvlsiclcg llgnlfvlsv
       61 flvarqrlnv aeiylanlaa sdlvfvlglp fwaenirnef nwpfgaflcr lvngvikanl
      121 fisiflvvai sqdryrvlvh pmasrrrrrr rwaqgtclli wavgallslp tfllrsvkav
      181 pelnvsacvl ryphdawpfa rmveltllsf llplaaiiff nyhilaalrg qrdisrmrcg
      241 gprdgrttal iltlvsafll cwapyhffaf leflfqvrav rgcfwenfid lglqcanffa
      301 fvnsclnpvi yvfwgqlfrt kvwelykrci pgsltpvass hrketlqlfw rn
//
LOCUS       XP_061015367             139 aa            linear   MAM 02-DEC-2023
DEFINITION  GSK3B-interacting protein [Dama dama].
ACCESSION   XP_061015367
VERSION     XP_061015367.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159384.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..139
                     /product="GSK3B-interacting protein"
                     /calculated_mol_wt=15568
     Region          33..133
                     /region_name="GSKIP_dom"
                     /note="GSKIP domain; pfam05303"
                     /db_xref="CDD:398795"
     CDS             1..139
                     /gene="GSKIP"
                     /coded_by="XM_061159384.1:134..553"
                     /db_xref="GeneID:133068223"
ORIGIN      
        1 metdcnpmdl sgvsgfeeea elngfegtdm kdmrleaeav vndvlfavnt mfvsktlrca
       61 ddvayinvet rernryclel teaglrvvgy afdqvddhlq tpyhetvysl ldtlspayre
      121 afgnallqrl ealkregqs
//
LOCUS       XP_061015368             139 aa            linear   MAM 02-DEC-2023
DEFINITION  GSK3B-interacting protein [Dama dama].
ACCESSION   XP_061015368
VERSION     XP_061015368.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159385.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..139
                     /product="GSK3B-interacting protein"
                     /calculated_mol_wt=15568
     Region          33..133
                     /region_name="GSKIP_dom"
                     /note="GSKIP domain; pfam05303"
                     /db_xref="CDD:398795"
     CDS             1..139
                     /gene="GSKIP"
                     /coded_by="XM_061159385.1:69..488"
                     /db_xref="GeneID:133068223"
ORIGIN      
        1 metdcnpmdl sgvsgfeeea elngfegtdm kdmrleaeav vndvlfavnt mfvsktlrca
       61 ddvayinvet rernryclel teaglrvvgy afdqvddhlq tpyhetvysl ldtlspayre
      121 afgnallqrl ealkregqs
//
LOCUS       XP_061015369             743 aa            linear   MAM 02-DEC-2023
DEFINITION  poly(A) polymerase alpha isoform X1 [Dama dama].
ACCESSION   XP_061015369
VERSION     XP_061015369.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159386.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..743
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..743
                     /product="poly(A) polymerase alpha isoform X1"
                     /calculated_mol_wt=82659
     Region          25..367
                     /region_name="PAP_central"
                     /note="Poly(A) polymerase central domain; pfam04928"
                     /db_xref="CDD:461486"
     Region          371..499
                     /region_name="PAP_RNA-bind"
                     /note="Poly(A) polymerase predicted RNA binding domain;
                     pfam04926"
                     /db_xref="CDD:461484"
     Region          <505..644
                     /region_name="motB"
                     /note="flagellar motor protein MotB; Reviewed; PRK12799"
                     /db_xref="CDD:183756"
     CDS             1..743
                     /gene="PAPOLA"
                     /coded_by="XM_061159386.1:221..2452"
                     /db_xref="GeneID:133068224"
ORIGIN      
        1 mpfsvcspvt tqgsqqtqpp qkhygitspi slaapketdc lltqklvetl kpfgvfeeee
       61 elqrrililg klnnlvkewi reisesknlp qsvienvggk iftfgsyrlg vhtkgadida
      121 lcvaprhvdr sdfftsfydk lklqeevkdl raveeafvpv iklcfdgiei dilfarlalq
      181 tipedldlrd dsllknldir cirslngcrv tdeilhlvpn idnfrltlra iklwakrhni
      241 ysnilgflgg vswamlvart cqlypnaias tlvhkfflvf skwewpnpvl lkqpeecnln
      301 lpvwdprvnp sdryhlmpii tpaypqqnst ynvsvstrmv mveefkqgla itdeillska
      361 ewsklfeapn ffqkykhyiv llasaptekq rlewvglves kirilvgsle knefitlahv
      421 npqsfpapke npdkeefrtm wviglvfkkt ensenlsvdl tydiqsftdt vyrqainskm
      481 fevdmkiaam hvkrkqlhql lpshvlqkkk khstegvklt plndssldls mdsdnsmsvp
      541 sptsamktsp lnssgssqgr nspapavtaa svtniqatev svpqvnsses sggtssesip
      601 qtatqpaiss ppkptvsrvv sstrlvnppp rpsgnaaaki pnpivgvkrt ssphkeespk
      661 ktkteedets edanclalsg hdktetkeql dtetsttqse tiqtatslla sqktsstdls
      721 dipalpanpi pviknsiklr lnr
//
LOCUS       XP_061015370             739 aa            linear   MAM 02-DEC-2023
DEFINITION  poly(A) polymerase alpha isoform X2 [Dama dama].
ACCESSION   XP_061015370
VERSION     XP_061015370.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159387.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..739
                     /product="poly(A) polymerase alpha isoform X2"
                     /calculated_mol_wt=82282
     Region          21..363
                     /region_name="PAP_central"
                     /note="Poly(A) polymerase central domain; pfam04928"
                     /db_xref="CDD:461486"
     Region          367..495
                     /region_name="PAP_RNA-bind"
                     /note="Poly(A) polymerase predicted RNA binding domain;
                     pfam04926"
                     /db_xref="CDD:461484"
     Region          <501..640
                     /region_name="motB"
                     /note="flagellar motor protein MotB; Reviewed; PRK12799"
                     /db_xref="CDD:183756"
     CDS             1..739
                     /gene="PAPOLA"
                     /coded_by="XM_061159387.1:221..2440"
                     /db_xref="GeneID:133068224"
ORIGIN      
        1 mpfpvttqgs qqtqppqkhy gitspislaa pketdclltq klvetlkpfg vfeeeeelqr
       61 rililgklnn lvkewireis esknlpqsvi envggkiftf gsyrlgvhtk gadidalcva
      121 prhvdrsdff tsfydklklq eevkdlrave eafvpviklc fdgieidilf arlalqtipe
      181 dldlrddsll knldircirs lngcrvtdei lhlvpnidnf rltlraiklw akrhniysni
      241 lgflggvswa mlvartcqly pnaiastlvh kfflvfskwe wpnpvllkqp eecnlnlpvw
      301 dprvnpsdry hlmpiitpay pqqnstynvs vstrmvmvee fkqglaitde illskaewsk
      361 lfeapnffqk ykhyivllas aptekqrlew vglveskiri lvgsleknef itlahvnpqs
      421 fpapkenpdk eefrtmwvig lvfkktense nlsvdltydi qsftdtvyrq ainskmfevd
      481 mkiaamhvkr kqlhqllpsh vlqkkkkhst egvkltplnd ssldlsmdsd nsmsvpspts
      541 amktsplnss gssqgrnspa pavtaasvtn iqatevsvpq vnssessggt ssesipqtat
      601 qpaissppkp tvsrvvsstr lvnppprpsg naaakipnpi vgvkrtssph keespkktkt
      661 eedetsedan clalsghdkt etkeqldtet sttqsetiqt atsllasqkt sstdlsdipa
      721 lpanpipvik nsiklrlnr
//
LOCUS       XP_061015371             722 aa            linear   MAM 02-DEC-2023
DEFINITION  poly(A) polymerase alpha isoform X3 [Dama dama].
ACCESSION   XP_061015371
VERSION     XP_061015371.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159388.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..722
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..722
                     /product="poly(A) polymerase alpha isoform X3"
                     /calculated_mol_wt=80412
     Region          25..367
                     /region_name="PAP_central"
                     /note="Poly(A) polymerase central domain; pfam04928"
                     /db_xref="CDD:461486"
     Region          371..499
                     /region_name="PAP_RNA-bind"
                     /note="Poly(A) polymerase predicted RNA binding domain;
                     pfam04926"
                     /db_xref="CDD:461484"
     Region          <505..644
                     /region_name="motB"
                     /note="flagellar motor protein MotB; Reviewed; PRK12799"
                     /db_xref="CDD:183756"
     CDS             1..722
                     /gene="PAPOLA"
                     /coded_by="XM_061159388.1:221..2389"
                     /db_xref="GeneID:133068224"
ORIGIN      
        1 mpfsvcspvt tqgsqqtqpp qkhygitspi slaapketdc lltqklvetl kpfgvfeeee
       61 elqrrililg klnnlvkewi reisesknlp qsvienvggk iftfgsyrlg vhtkgadida
      121 lcvaprhvdr sdfftsfydk lklqeevkdl raveeafvpv iklcfdgiei dilfarlalq
      181 tipedldlrd dsllknldir cirslngcrv tdeilhlvpn idnfrltlra iklwakrhni
      241 ysnilgflgg vswamlvart cqlypnaias tlvhkfflvf skwewpnpvl lkqpeecnln
      301 lpvwdprvnp sdryhlmpii tpaypqqnst ynvsvstrmv mveefkqgla itdeillska
      361 ewsklfeapn ffqkykhyiv llasaptekq rlewvglves kirilvgsle knefitlahv
      421 npqsfpapke npdkeefrtm wviglvfkkt ensenlsvdl tydiqsftdt vyrqainskm
      481 fevdmkiaam hvkrkqlhql lpshvlqkkk khstegvklt plndssldls mdsdnsmsvp
      541 sptsamktsp lnssgssqgr nspapavtaa svtniqatev svpqvnsses sggtssesip
      601 qtatqpaiss ppkptvsrvv sstrlvnppp rpsgnaaaki pnpivgvkrt ssphkeespk
      661 ktkteeeqld tetsttqset iqtatsllas qktsstdlsd ipalpanpip viknsiklrl
      721 nr
//
LOCUS       XP_061015372             697 aa            linear   MAM 02-DEC-2023
DEFINITION  poly(A) polymerase alpha isoform X4 [Dama dama].
ACCESSION   XP_061015372
VERSION     XP_061015372.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159389.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..697
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..697
                     /product="poly(A) polymerase alpha isoform X4"
                     /calculated_mol_wt=77747
     Region          25..367
                     /region_name="PAP_central"
                     /note="Poly(A) polymerase central domain; pfam04928"
                     /db_xref="CDD:461486"
     Region          371..499
                     /region_name="PAP_RNA-bind"
                     /note="Poly(A) polymerase predicted RNA binding domain;
                     pfam04926"
                     /db_xref="CDD:461484"
     Region          <538..685
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..697
                     /gene="PAPOLA"
                     /coded_by="XM_061159389.1:221..2314"
                     /db_xref="GeneID:133068224"
ORIGIN      
        1 mpfsvcspvt tqgsqqtqpp qkhygitspi slaapketdc lltqklvetl kpfgvfeeee
       61 elqrrililg klnnlvkewi reisesknlp qsvienvggk iftfgsyrlg vhtkgadida
      121 lcvaprhvdr sdfftsfydk lklqeevkdl raveeafvpv iklcfdgiei dilfarlalq
      181 tipedldlrd dsllknldir cirslngcrv tdeilhlvpn idnfrltlra iklwakrhni
      241 ysnilgflgg vswamlvart cqlypnaias tlvhkfflvf skwewpnpvl lkqpeecnln
      301 lpvwdprvnp sdryhlmpii tpaypqqnst ynvsvstrmv mveefkqgla itdeillska
      361 ewsklfeapn ffqkykhyiv llasaptekq rlewvglves kirilvgsle knefitlahv
      421 npqsfpapke npdkeefrtm wviglvfkkt ensenlsvdl tydiqsftdt vyrqainskm
      481 fevdmkiaam hvkrkqlhql lpshvlqkkk khstegvklt plndssldls mdsdnsmsvp
      541 sptsamktsp lnssgssqgr nspapavtaa svtniqatev svpqvnsses sggtssesip
      601 qtatqpaiss ppkptvsrvv sstrlvnppp rpsgnaaaki pnpivgvkrt ssphkeespk
      661 ktkteektss tdlsdipalp anpipvikns iklrlnr
//
LOCUS       XP_061015373             396 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase VRK1 isoform X1 [Dama dama].
ACCESSION   XP_061015373
VERSION     XP_061015373.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159390.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..396
                     /product="serine/threonine-protein kinase VRK1 isoform X1"
                     /calculated_mol_wt=45193
     Region          26..326
                     /region_name="STKc_VRK1"
                     /note="Catalytic domain of the Serine/Threonine protein
                     kinase, Vaccinia Related Kinase 1; cd14122"
                     /db_xref="CDD:271024"
     Site            order(43..47,51,69,71,111,131..134,137,139,177,179,
                     181..182,184,197,200,223..226)
                     /site_type="active"
                     /db_xref="CDD:271024"
     Site            order(43..47,51,69,71,111,131..134,137,177,179,181..182,
                     184,197)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271024"
     Site            order(47,137,139,177,179,181,200,223..226)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271024"
     Site            196..226
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271024"
     CDS             1..396
                     /gene="VRK1"
                     /coded_by="XM_061159390.1:234..1424"
                     /db_xref="GeneID:133068226"
ORIGIN      
        1 mprvkaaqag rqgpakrrla ehfvageiit dmtkkewklg spvghggfgc iyladmnssk
       61 svgsdapcvv kvepsdngpl ftelkfyqra akpeqiqkwi rthklkylgv pkywgsglhd
      121 kngksyrfmi idrfgsdlqk iyeanakrfs rktvlqlslr ildileyihe heyvhgdika
      181 snlllsyknp dqvylvdygl ayrycpegth keykedpkrc hdgtieftsi dahngvapsr
      241 rgdleilgyc miqwlsghlp wednlkdpny vrdskiryre niaslmdkcf peknkpdeia
      301 kymetvklld yvekplyqkl rdillqglka igskddgkld ltivengslk akpvakkrkk
      361 eaeesvacnv edmecsdkqt eeaaqtrskt rkrvqk
//
LOCUS       XP_061015374             396 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase VRK1 isoform X1 [Dama dama].
ACCESSION   XP_061015374
VERSION     XP_061015374.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159391.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..396
                     /product="serine/threonine-protein kinase VRK1 isoform X1"
                     /calculated_mol_wt=45193
     Region          26..326
                     /region_name="STKc_VRK1"
                     /note="Catalytic domain of the Serine/Threonine protein
                     kinase, Vaccinia Related Kinase 1; cd14122"
                     /db_xref="CDD:271024"
     Site            order(43..47,51,69,71,111,131..134,137,139,177,179,
                     181..182,184,197,200,223..226)
                     /site_type="active"
                     /db_xref="CDD:271024"
     Site            order(43..47,51,69,71,111,131..134,137,177,179,181..182,
                     184,197)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271024"
     Site            order(47,137,139,177,179,181,200,223..226)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271024"
     Site            196..226
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271024"
     CDS             1..396
                     /gene="VRK1"
                     /coded_by="XM_061159391.1:140..1330"
                     /db_xref="GeneID:133068226"
ORIGIN      
        1 mprvkaaqag rqgpakrrla ehfvageiit dmtkkewklg spvghggfgc iyladmnssk
       61 svgsdapcvv kvepsdngpl ftelkfyqra akpeqiqkwi rthklkylgv pkywgsglhd
      121 kngksyrfmi idrfgsdlqk iyeanakrfs rktvlqlslr ildileyihe heyvhgdika
      181 snlllsyknp dqvylvdygl ayrycpegth keykedpkrc hdgtieftsi dahngvapsr
      241 rgdleilgyc miqwlsghlp wednlkdpny vrdskiryre niaslmdkcf peknkpdeia
      301 kymetvklld yvekplyqkl rdillqglka igskddgkld ltivengslk akpvakkrkk
      361 eaeesvacnv edmecsdkqt eeaaqtrskt rkrvqk
//
LOCUS       XP_061015375             396 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase VRK1 isoform X1 [Dama dama].
ACCESSION   XP_061015375
VERSION     XP_061015375.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159392.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..396
                     /product="serine/threonine-protein kinase VRK1 isoform X1"
                     /calculated_mol_wt=45193
     Region          26..326
                     /region_name="STKc_VRK1"
                     /note="Catalytic domain of the Serine/Threonine protein
                     kinase, Vaccinia Related Kinase 1; cd14122"
                     /db_xref="CDD:271024"
     Site            order(43..47,51,69,71,111,131..134,137,139,177,179,
                     181..182,184,197,200,223..226)
                     /site_type="active"
                     /db_xref="CDD:271024"
     Site            order(43..47,51,69,71,111,131..134,137,177,179,181..182,
                     184,197)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271024"
     Site            order(47,137,139,177,179,181,200,223..226)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271024"
     Site            196..226
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271024"
     CDS             1..396
                     /gene="VRK1"
                     /coded_by="XM_061159392.1:112..1302"
                     /db_xref="GeneID:133068226"
ORIGIN      
        1 mprvkaaqag rqgpakrrla ehfvageiit dmtkkewklg spvghggfgc iyladmnssk
       61 svgsdapcvv kvepsdngpl ftelkfyqra akpeqiqkwi rthklkylgv pkywgsglhd
      121 kngksyrfmi idrfgsdlqk iyeanakrfs rktvlqlslr ildileyihe heyvhgdika
      181 snlllsyknp dqvylvdygl ayrycpegth keykedpkrc hdgtieftsi dahngvapsr
      241 rgdleilgyc miqwlsghlp wednlkdpny vrdskiryre niaslmdkcf peknkpdeia
      301 kymetvklld yvekplyqkl rdillqglka igskddgkld ltivengslk akpvakkrkk
      361 eaeesvacnv edmecsdkqt eeaaqtrskt rkrvqk
//
LOCUS       XP_061015376             395 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase VRK1 isoform X2 [Dama dama].
ACCESSION   XP_061015376
VERSION     XP_061015376.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159393.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..395
                     /product="serine/threonine-protein kinase VRK1 isoform X2"
                     /calculated_mol_wt=45065
     Region          26..326
                     /region_name="STKc_VRK1"
                     /note="Catalytic domain of the Serine/Threonine protein
                     kinase, Vaccinia Related Kinase 1; cd14122"
                     /db_xref="CDD:271024"
     Site            order(43..47,51,69,71,111,131..134,137,139,177,179,
                     181..182,184,197,200,223..226)
                     /site_type="active"
                     /db_xref="CDD:271024"
     Site            order(43..47,51,69,71,111,131..134,137,177,179,181..182,
                     184,197)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271024"
     Site            order(47,137,139,177,179,181,200,223..226)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271024"
     Site            196..226
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271024"
     CDS             1..395
                     /gene="VRK1"
                     /coded_by="XM_061159393.1:234..1421"
                     /db_xref="GeneID:133068226"
ORIGIN      
        1 mprvkaaqag rqgpakrrla ehfvageiit dmtkkewklg spvghggfgc iyladmnssk
       61 svgsdapcvv kvepsdngpl ftelkfyqra akpeqiqkwi rthklkylgv pkywgsglhd
      121 kngksyrfmi idrfgsdlqk iyeanakrfs rktvlqlslr ildileyihe heyvhgdika
      181 snlllsyknp dqvylvdygl ayrycpegth keykedpkrc hdgtieftsi dahngvapsr
      241 rgdleilgyc miqwlsghlp wednlkdpny vrdskiryre niaslmdkcf peknkpdeia
      301 kymetvklld yvekplyqkl rdillqglka igskddgkld ltivengslk akpvakrkke
      361 aeesvacnve dmecsdkqte eaaqtrsktr krvqk
//
LOCUS       XP_061015377             905 aa            linear   MAM 02-DEC-2023
DEFINITION  B-cell lymphoma/leukemia 11B isoform X1 [Dama dama].
ACCESSION   XP_061015377
VERSION     XP_061015377.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159394.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..905
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..905
                     /product="B-cell lymphoma/leukemia 11B isoform X1"
                     /calculated_mol_wt=95984
     Region          429..450
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          430..450
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Site            order(435,437,439,441..442,445..446,449,463,465..467,
                     469..470,474,477)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275370"
     Region          442..467
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          458..478
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Region          808..829
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          809..829
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(814,816,818,820..821,824..825,828,842,844,848..849,
                     852..853,856,872,874,876,878..879,882..883)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          821..846
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          837..857
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(837,840,853,857)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          867..885
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..905
                     /gene="BCL11B"
                     /coded_by="XM_061159394.1:989..3706"
                     /db_xref="GeneID:133068227"
ORIGIN      
        1 msrrkqgnpq hlsqreiitp epehveaail eedegleiee pgslglmvgg pdpdlltcgq
       61 cqmnfplgdi lvfiehkkkq cggslgacyd kgldkgsppp ssrselrkvs epveigiqvt
      121 pdeddhllsp tkgvcpkqen ltgpcrpaql pamapiaass shphpsaits plralgalpp
      181 cvplpccsal pvsgdgtqge gqteapfgcq cqlsgkdeps syicttckqp fnsawfllqh
      241 aqnthgfriy lepgpasssl tprltipppl gpeavaqspl mnflgdsnpf nllrmtgpil
      301 rdhpgfgegr lpgtpplfsp pprhhldphr lsaeemglva qhpsafdrvm rlnpmaidsp
      361 amdfsrrlre lagnsstppp vspgrgnpmh rllnpfqpsp kspflstppl ppmppggtpp
      421 pqppaksksc efcgktfkfq snlivhrrsh tgekpykcql cdhacsqask lkrhmkthmh
      481 kagslagrsd dglsaasspe pgtseltgeg lkaadgdfrh hesdpslghe peeedeeeee
      541 eeeelllene srpessfsmd selsrnreng gggggggvag vpgagggaaa kaladekalv
      601 lgkvmenvgl galppygdll adkqkrgafl kraagggggg ggdpgdddda ggcgdagpgg
      661 avngrgggfa pgtepfpglf prkpaplpsp glnsaakrik vekdlelppa alipsenvys
      721 qwlvgyaasr hfmkdpflgf tdarqspfat ssehssengs lrfstppgdl ldgglsgrsg
      781 tasggstphl ggpgpgrpss kegrrsdtce ycgkvfkncs nltvhrrsht gerpykcelc
      841 nyacaqsskl trhmkthgqi gkevyrcdic qmpfsvystl ekhmkkwhge hlltndvkie
      901 qaers
//
LOCUS       XP_061015378             904 aa            linear   MAM 02-DEC-2023
DEFINITION  B-cell lymphoma/leukemia 11B isoform X2 [Dama dama].
ACCESSION   XP_061015378
VERSION     XP_061015378.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159395.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..904
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..904
                     /product="B-cell lymphoma/leukemia 11B isoform X2"
                     /calculated_mol_wt=95886
     Region          428..449
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          429..449
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Site            order(434,436,438,440..441,444..445,448,462,464..466,
                     468..469,473,476)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275370"
     Region          441..466
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          457..477
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Region          807..828
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          808..828
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(813,815,817,819..820,823..824,827,841,843,847..848,
                     851..852,855,871,873,875,877..878,881..882)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          820..845
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          836..856
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(836,839,852,856)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          866..884
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..904
                     /gene="BCL11B"
                     /coded_by="XM_061159395.1:989..3703"
                     /db_xref="GeneID:133068227"
ORIGIN      
        1 msrrkqgnpq hlsqreiitq pehveaaile edegleieep gslglmvggp dpdlltcgqc
       61 qmnfplgdil vfiehkkkqc ggslgacydk gldkgsppps srselrkvse pveigiqvtp
      121 deddhllspt kgvcpkqenl tgpcrpaqlp amapiaasss hphpsaitsp lralgalppc
      181 vplpccsalp vsgdgtqgeg qteapfgcqc qlsgkdepss yicttckqpf nsawfllqha
      241 qnthgfriyl epgpassslt prltippplg peavaqsplm nflgdsnpfn llrmtgpilr
      301 dhpgfgegrl pgtpplfspp prhhldphrl saeemglvaq hpsafdrvmr lnpmaidspa
      361 mdfsrrlrel agnsstpppv spgrgnpmhr llnpfqpspk spflstpplp pmppggtppp
      421 qppaksksce fcgktfkfqs nlivhrrsht gekpykcqlc dhacsqaskl krhmkthmhk
      481 agslagrsdd glsaasspep gtseltgegl kaadgdfrhh esdpslghep eeedeeeeee
      541 eeelllenes rpessfsmds elsrnrengg ggggggvagv pgagggaaak aladekalvl
      601 gkvmenvglg alppygdlla dkqkrgaflk raaggggggg gdpgddddag gcgdagpgga
      661 vngrgggfap gtepfpglfp rkpaplpspg lnsaakrikv ekdlelppaa lipsenvysq
      721 wlvgyaasrh fmkdpflgft darqspfats sehssengsl rfstppgdll dgglsgrsgt
      781 asggstphlg gpgpgrpssk egrrsdtcey cgkvfkncsn ltvhrrshtg erpykcelcn
      841 yacaqssklt rhmkthgqig kevyrcdicq mpfsvystle khmkkwhgeh lltndvkieq
      901 aers
//
LOCUS       XP_061015379             833 aa            linear   MAM 02-DEC-2023
DEFINITION  B-cell lymphoma/leukemia 11B isoform X3 [Dama dama].
ACCESSION   XP_061015379
VERSION     XP_061015379.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159396.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..833
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..833
                     /product="B-cell lymphoma/leukemia 11B isoform X3"
                     /calculated_mol_wt=88897
     Region          357..378
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          358..378
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Site            order(363,365,367,369..370,373..374,377,391,393..395,
                     397..398,402,405)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275370"
     Region          370..395
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          386..406
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Region          736..757
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          737..757
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(742,744,746,748..749,752..753,756,770,772,776..777,
                     780..781,784,800,802,804,806..807,810..811)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          749..774
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          765..785
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(765,768,781,785)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          795..813
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..833
                     /gene="BCL11B"
                     /coded_by="XM_061159396.1:989..3490"
                     /db_xref="GeneID:133068227"
ORIGIN      
        1 msrrkqgnpq hlsqreiitp epehveaail eedegleiee pgslglmvgg pdpdlltcgq
       61 cqmnfplgdi lvfiehkkkq cggslgacyd kgldkgsppp ssrselrkvs epveigiqvt
      121 pdeddhllsp tkgvcpkqen ltgkdepssy icttckqpfn sawfllqhaq nthgfriyle
      181 pgpasssltp rltippplgp eavaqsplmn flgdsnpfnl lrmtgpilrd hpgfgegrlp
      241 gtpplfsppp rhhldphrls aeemglvaqh psafdrvmrl npmaidspam dfsrrlrela
      301 gnsstpppvs pgrgnpmhrl lnpfqpspks pflstpplpp mppggtpppq ppakskscef
      361 cgktfkfqsn livhrrshtg ekpykcqlcd hacsqasklk rhmkthmhka gslagrsddg
      421 lsaasspepg tseltgeglk aadgdfrhhe sdpslghepe eedeeeeeee eelllenesr
      481 pessfsmdse lsrnrenggg gggggvagvp gagggaaaka ladekalvlg kvmenvglga
      541 lppygdllad kqkrgaflkr aagggggggg dpgddddagg cgdagpggav ngrgggfapg
      601 tepfpglfpr kpaplpspgl nsaakrikve kdlelppaal ipsenvysqw lvgyaasrhf
      661 mkdpflgftd arqspfatss ehssengslr fstppgdlld gglsgrsgta sggstphlgg
      721 pgpgrpsske grrsdtceyc gkvfkncsnl tvhrrshtge rpykcelcny acaqsskltr
      781 hmkthgqigk evyrcdicqm pfsvystlek hmkkwhgehl ltndvkieqa ers
//
LOCUS       XP_061015380             832 aa            linear   MAM 02-DEC-2023
DEFINITION  B-cell lymphoma/leukemia 11B isoform X4 [Dama dama].
ACCESSION   XP_061015380
VERSION     XP_061015380.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159397.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..832
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..832
                     /product="B-cell lymphoma/leukemia 11B isoform X4"
                     /calculated_mol_wt=88799
     Region          356..377
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          357..377
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Site            order(362,364,366,368..369,372..373,376,390,392..394,
                     396..397,401,404)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275370"
     Region          369..394
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          385..405
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Region          735..756
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          736..756
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(741,743,745,747..748,751..752,755,769,771,775..776,
                     779..780,783,799,801,803,805..806,809..810)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          748..773
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          764..784
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(764,767,780,784)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          794..812
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..832
                     /gene="BCL11B"
                     /coded_by="XM_061159397.1:989..3487"
                     /db_xref="GeneID:133068227"
ORIGIN      
        1 msrrkqgnpq hlsqreiitq pehveaaile edegleieep gslglmvggp dpdlltcgqc
       61 qmnfplgdil vfiehkkkqc ggslgacydk gldkgsppps srselrkvse pveigiqvtp
      121 deddhllspt kgvcpkqenl tgkdepssyi cttckqpfns awfllqhaqn thgfriylep
      181 gpasssltpr ltippplgpe avaqsplmnf lgdsnpfnll rmtgpilrdh pgfgegrlpg
      241 tpplfspppr hhldphrlsa eemglvaqhp safdrvmrln pmaidspamd fsrrlrelag
      301 nsstpppvsp grgnpmhrll npfqpspksp flstpplppm ppggtpppqp pakskscefc
      361 gktfkfqsnl ivhrrshtge kpykcqlcdh acsqasklkr hmkthmhkag slagrsddgl
      421 saasspepgt seltgeglka adgdfrhhes dpslghepee edeeeeeeee elllenesrp
      481 essfsmdsel srnrengggg ggggvagvpg agggaaakal adekalvlgk vmenvglgal
      541 ppygdlladk qkrgaflkra aggggggggd pgddddaggc gdagpggavn grgggfapgt
      601 epfpglfprk paplpspgln saakrikvek dlelppaali psenvysqwl vgyaasrhfm
      661 kdpflgftda rqspfatsse hssengslrf stppgdlldg glsgrsgtas ggstphlggp
      721 gpgrpsskeg rrsdtceycg kvfkncsnlt vhrrshtger pykcelcnya caqsskltrh
      781 mkthgqigke vyrcdicqmp fsvystlekh mkkwhgehll tndvkieqae rs
//
LOCUS       XP_061015381             594 aa            linear   MAM 02-DEC-2023
DEFINITION  actin-histidine N-methyltransferase isoform X1 [Dama dama].
ACCESSION   XP_061015381
VERSION     XP_061015381.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159398.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..594
                     /product="actin-histidine N-methyltransferase isoform X1"
                     /calculated_mol_wt=67007
     Region          80..329
                     /region_name="SET_SETD3"
                     /note="SET domain found in SET domain-containing protein 3
                     (SETD3) and similar proteins; cd19176"
                     /db_xref="CDD:380953"
     Site            order(104,106,180,253..254,275..279,313,325,327,329)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380953"
     Site            order(105..106,123,251..256,275..279,286,311..314)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380953"
     Region          344..475
                     /region_name="Rubis-subs-bind"
                     /note="Rubisco LSMT substrate-binding; pfam09273"
                     /db_xref="CDD:462737"
     CDS             1..594
                     /gene="SETD3"
                     /coded_by="XM_061159398.1:149..1933"
                     /db_xref="GeneID:133068228"
ORIGIN      
        1 mgkksrvktq ksgtgaaasv spketlnlts ellqkcsspa pgpgkeweey vqirslveki
       61 rkkqkglsvt fdgkredyfp dlmkwaseng asvegfemvn fkeegfglra trdikaeelf
      121 lwvprkllmt vesaknsvlg plysqdrilq amgnitlafh llceradpns fwqpyiqtlp
      181 seydtplyfe edevrylqst qaihdvfsqy kntarqyayf ykviqthpha hklplkdsft
      241 yedyrwavss vmtrqnqipt edgsrvtlal iplwdmcnht sglittgynl eddrcecval
      301 qdfrageqiy ifygtrsnae fvihsgfffd nnshdrvkik lgvsksdrly amkaevlara
      361 giptssvfal hfteppisaq llaflrvfcm teeelkehll gdnaidrift lgnseypvsw
      421 dnevrlwtfl edraslllkt ykttieedks flknhdlsar atmavklrlg ekeileravk
      481 saaanrefyr rqmeeraplp kyeesgggll egvadsrlpl vlrnldgeag aqealtltea
      541 vrraqaaehg lvngessipn gtrseketlt qeeskratgd akepssdsae dgak
//
LOCUS       XP_061015382             563 aa            linear   MAM 02-DEC-2023
DEFINITION  actin-histidine N-methyltransferase isoform X2 [Dama dama].
ACCESSION   XP_061015382
VERSION     XP_061015382.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159399.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..563
                     /product="actin-histidine N-methyltransferase isoform X2"
                     /calculated_mol_wt=63455
     Region          49..298
                     /region_name="SET_SETD3"
                     /note="SET domain found in SET domain-containing protein 3
                     (SETD3) and similar proteins; cd19176"
                     /db_xref="CDD:380953"
     Site            order(73,75,149,222..223,244..248,282,294,296,298)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380953"
     Site            order(74..75,92,220..225,244..248,255,280..283)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380953"
     Region          313..444
                     /region_name="Rubis-subs-bind"
                     /note="Rubisco LSMT substrate-binding; pfam09273"
                     /db_xref="CDD:462737"
     CDS             1..563
                     /gene="SETD3"
                     /coded_by="XM_061159399.1:149..1840"
                     /db_xref="GeneID:133068228"
ORIGIN      
        1 mgkksrvktq ksgtgaaasv spketlnlts ellqslsvtf dgkredyfpd lmkwasenga
       61 svegfemvnf keegfglrat rdikaeelfl wvprkllmtv esaknsvlgp lysqdrilqa
      121 mgnitlafhl lceradpnsf wqpyiqtlps eydtplyfee devrylqstq aihdvfsqyk
      181 ntarqyayfy kviqthphah klplkdsfty edyrwavssv mtrqnqipte dgsrvtlali
      241 plwdmcnhts glittgynle ddrcecvalq dfrageqiyi fygtrsnaef vihsgfffdn
      301 nshdrvkikl gvsksdrlya mkaevlarag iptssvfalh fteppisaql laflrvfcmt
      361 eeelkehllg dnaidriftl gnseypvswd nevrlwtfle draslllkty kttieedksf
      421 lknhdlsara tmavklrlge keileravks aaanrefyrr qmeeraplpk yeesggglle
      481 gvadsrlplv lrnldgeaga qealtlteav rraqaaehgl vngessipng trseketltq
      541 eeskratgda kepssdsaed gak
//
LOCUS       XP_061015383             582 aa            linear   MAM 02-DEC-2023
DEFINITION  cyclin-K [Dama dama].
ACCESSION   XP_061015383
VERSION     XP_061015383.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159400.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..582
                     /product="cyclin-K"
                     /calculated_mol_wt=64009
     Region          40..154
                     /region_name="CYCLIN_CCNK_rpt1"
                     /note="first cyclin box found in cyclin-K (CCNK) and
                     similar proteins; cd20530"
                     /db_xref="CDD:410233"
     Site            order(90,102,105..106,108,138,141..146,148..149,152..154)
                     /site_type="other"
                     /note="CDK interface [polypeptide binding]"
                     /db_xref="CDD:410233"
     Region          158..258
                     /region_name="CYCLIN_CCNK_rpt2"
                     /note="second cyclin box found in cyclin-K (CCNK) and
                     similar proteins; cd20531"
                     /db_xref="CDD:410234"
     CDS             1..582
                     /gene="CCNK"
                     /coded_by="XM_061159400.1:170..1918"
                     /db_xref="GeneID:133068229"
ORIGIN      
        1 mkenkenssp svtsanldht kpcwywdkkd lahtpsqleg ldpatearyr regarfifdv
       61 gtrlglhydt latgiiyfhr fymfhsfkqf pryvtgaccl flagkveetp kkckdiikta
      121 rsllndvqfg qfgddpkeev mvlerillqt ikfdlqvehp yqfllkyakq lkgdknkiqk
      181 lvqmawtfvn dslcttlslq wepeiiavav mylagrlckf eiqewtskpm yrrwweqfvq
      241 dvpvdvledi chqildlysq gkqqmphhtp hqlqqppslq ptpqvppvpp sqpppgpepp
      301 qppqkdsqqp aqqpppppaq ppkkpspqps pprqakrtvv vspkeenkaa eppppkipki
      361 epthpplppa hpppdrkppl aaalgeaepp gpveagdlpk vqipppahpa pvhqppplph
      421 rppppppssy mtgmstsssy msgegyqslq smmktegpsy galppaygpp ahlpyhphvy
      481 ppnpppppvp pppasfpppa ippptpgypp ppptynpnfp pppprlppth avpphpppgl
      541 glppasyppp avppggqppv pppipppgmp pvgglgraaw mr
//
LOCUS       XP_061015384             420 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 85C [Dama dama].
ACCESSION   XP_061015384
VERSION     XP_061015384.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159401.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..420
                     /product="coiled-coil domain-containing protein 85C"
                     /calculated_mol_wt=45099
     Region          13..202
                     /region_name="CCDC85"
                     /note="CCDC85 family; pfam10226"
                     /db_xref="CDD:463009"
     CDS             1..420
                     /gene="CCDC85C"
                     /coded_by="XM_061159401.1:15..1277"
                     /db_xref="GeneID:133068231"
ORIGIN      
        1 makppaaaaa aaseelsqvp deellrwske elarrlrrae gekvglmleh gglmrdvnrr
       61 lqqhlleirg lkdvnqrlqd dnqelrelcc fldddrqkgr klarewqrfg rhaagavwhe
      121 varsqqklre learqeallr enlelkelvl lldeeraala ggaggaggag gggagsrssi
      181 dsqaslsgpl pggaagagtr dvgdgsstss agsggspdhh hhvpppllpp gppkapdgka
      241 vatrrslddl sappphhrsi pnglhdpssa yvrqletkvk llegdkllvq qagpgefrtl
      301 rkgfspyhse sqlsslppsy qdslqngpac papelpspps ggysstgqkp eavvhamkvl
      361 evhenldrpl qdsceedlse kekaivremc nvvwrklgda asskpsirqh lsgnqfkgpl
//
LOCUS       XP_061015385             786 aa            linear   MAM 02-DEC-2023
DEFINITION  HHIP-like protein 1 [Dama dama].
ACCESSION   XP_061015385
VERSION     XP_061015385.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159402.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..786
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..786
                     /product="HHIP-like protein 1"
                     /calculated_mol_wt=86821
     Region          48..192
                     /region_name="Folate_rec"
                     /note="Folate receptor family; pfam03024"
                     /db_xref="CDD:397250"
     Region          193..580
                     /region_name="YliI"
                     /note="Glucose/arabinose dehydrogenase, beta-propeller
                     fold [Carbohydrate transport and metabolism]; COG2133"
                     /db_xref="CDD:441736"
     Region          677..780
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     CDS             1..786
                     /gene="HHIPL1"
                     /coded_by="XM_061159402.1:1..2361"
                     /db_xref="GeneID:133068232"
ORIGIN      
        1 magrragaga gagtllalla lralgaaahp qcldfrppfr ppqplrfcaq ysafgcctpe
       61 qdaalarrfg avaarvdaam waecagyald llcqecspya ahlydaedps tplrtvpglc
      121 edycldmwqt crglfrhlsp drelwalegn raklcrslsl ddtdycfprl lvnenlnsnl
      181 grvvadaegc lqlcleevan glrnpvamvh ardgthrffv aeqlglvwvy lpdrsrlekp
      241 flnisravlt spwegdergf lglafhpsfr hngklyvyys vgvgfdewir isefrvsedd
      301 vnavdhdser iileieepas nhnggqllfg ddgylyiftg dggmagdpfg kfgnaqnksa
      361 llgkvlridv drnergplyr ippdnpfvgd paarpevyaf gvrnmwrcsf drgdpatgag
      421 rgrlfcgdvg qnkfeevdlv ergrnygwra regyecydrk lcanaslddt lpifayphkl
      481 gksvtggyvy rgceypnlng lyifgdfmsg rlmslrenle tgqwryseic mgrgqtcafp
      541 glinnyyphi isfaedeage lyfmstgvps atvargvvyk midpsrrapp gkcqvqpsrv
      601 kvrsrlihfv pkekfirrte stprptkapr rsrptaappa ptprparptp rpgrrrgsgr
      661 wrgrpgtadp epsngavrlv rpaglspgrg rvevfaggrw gtvcddawdt kaaavvcrql
      721 gfryaaratk raefgegrtl pillddvrct gsernlleca haglgshncg hqedagvvcs
      781 redpdl
//
LOCUS       XP_061015386             817 aa            linear   MAM 02-DEC-2023
DEFINITION  echinoderm microtubule-associated protein-like 1 isoform X1 [Dama
            dama].
ACCESSION   XP_061015386
VERSION     XP_061015386.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159403.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..817
                     /product="echinoderm microtubule-associated protein-like 1
                     isoform X1"
                     /calculated_mol_wt=89771
     Region          22..79
                     /region_name="TD_EMAP1"
                     /note="trimerization domain of echinoderm
                     microtubule-associated protein-like 1; cd21947"
                     /db_xref="CDD:409268"
     Site            order(34..35,37..38,41..42,44..45,48..49,51..52,55..56,
                     58..59,62..63,65..67,69..70,72)
                     /site_type="other"
                     /note="putative trimer interface [polypeptide binding]"
                     /db_xref="CDD:409268"
     Region          189..260
                     /region_name="HELP"
                     /note="HELP motif; pfam03451"
                     /db_xref="CDD:460922"
     Region          263..311
                     /region_name="WD40"
                     /note="WD domain, G-beta repeat; pfam00400"
                     /db_xref="CDD:459801"
     Region          276..325
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          330..392
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          346..701
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          424..459
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          465..530
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          549..584
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          630..671
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          677..701
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          744..783
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          778..814
                     /region_name="WD40"
                     /note="WD domain, G-beta repeat; pfam00400"
                     /db_xref="CDD:459801"
     Region          789..816
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..817
                     /gene="EML1"
                     /coded_by="XM_061159403.1:75..2528"
                     /db_xref="GeneID:133068233"
ORIGIN      
        1 medgfssyss lydtssllqf cnddsasaas smevtdrias leqrvqmqed diqllksala
       61 dvvrrlnite eqqavlnrkg ptkarplvqt lplrttvnng avvpkkasgs lpappgarre
      121 aaapattkst ikrtssserv spggrresyg dskgnrnrtg stsssssgkk nseskpkepv
      181 fsaeegyvkm flrgrpvtmy mpkdqvdsyn leakvelptk rlklewvygy rgrdcrnnly
      241 llptgetvyf iasvvvlynv eeqlqrhylg hnddvkclav hpdrvtiatg qvagtskdgk
      301 qqlpphvriw dsvtlntlhv igigffdrav tciafsksng gsnlcavdds ndhvlsvwdw
      361 qkeerladvk csneavfaad fhptdtniiv tcgkshlyfw tlegsslikk qglfekqekp
      421 kfvlcvtfse ngdtitgdss gnilvwgkgt nrisyavpga heggifalcm lrdgtlvsgg
      481 gkdrkliswd gnyqklhkte ipeqfgpirt vaegkgdvil igttrnfvlq gtlsgdftpi
      541 tqghtdelwg laihaskpqf ltcghdrhat lwdavghrpv wdkiiedpaq ssgfhpsgsv
      601 vavgtltgrw fvfdtetkdl vtvhtdgneq lsvmryspdg nflaigshdn ciyiygvsdn
      661 grkytrvgkc sghssfithl dwsvnsqflv snsgdyeily wvpsackqvv svettrdiew
      721 atytctlgfh vfgvwpegsd gtdinaasra hekkllstgd dfgkvhlfsy pcsqfrapsh
      781 vysghsshvt nvaflcddsh listggkdts imqwrvv
//
LOCUS       XP_061015388             816 aa            linear   MAM 02-DEC-2023
DEFINITION  echinoderm microtubule-associated protein-like 1 isoform X2 [Dama
            dama].
ACCESSION   XP_061015388
VERSION     XP_061015388.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159405.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..816
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..816
                     /product="echinoderm microtubule-associated protein-like 1
                     isoform X2"
                     /calculated_mol_wt=89643
     Region          22..79
                     /region_name="TD_EMAP1"
                     /note="trimerization domain of echinoderm
                     microtubule-associated protein-like 1; cd21947"
                     /db_xref="CDD:409268"
     Site            order(34..35,37..38,41..42,44..45,48..49,51..52,55..56,
                     58..59,62..63,65..67,69..70,72)
                     /site_type="other"
                     /note="putative trimer interface [polypeptide binding]"
                     /db_xref="CDD:409268"
     Region          189..260
                     /region_name="HELP"
                     /note="HELP motif; pfam03451"
                     /db_xref="CDD:460922"
     Region          276..324
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          278..700
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          329..391
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          423..458
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          464..529
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          548..583
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          629..670
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          676..700
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          743..782
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          777..813
                     /region_name="WD40"
                     /note="WD domain, G-beta repeat; pfam00400"
                     /db_xref="CDD:459801"
     Region          788..815
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..816
                     /gene="EML1"
                     /coded_by="XM_061159405.1:75..2525"
                     /db_xref="GeneID:133068233"
ORIGIN      
        1 medgfssyss lydtssllqf cnddsasaas smevtdrias leqrvqmqed diqllksala
       61 dvvrrlnite eqqavlnrkg ptkarplvqt lplrttvnng avvpkkasgs lpappgarre
      121 aaapattkst ikrtssserv spggrresyg dskgnrnrtg stsssssgkk nseskpkepv
      181 fsaeegyvkm flrgrpvtmy mpkdqvdsyn leakvelptk rlklewvygy rgrdcrnnly
      241 llptgetvyf iasvvvlynv eeqlqrhylg hnddvkclav hpdrvtiatg qvagtskdgk
      301 qlpphvriwd svtlntlhvi gigffdravt ciafsksngg snlcavddsn dhvlsvwdwq
      361 keerladvkc sneavfaadf hptdtniivt cgkshlyfwt legsslikkq glfekqekpk
      421 fvlcvtfsen gdtitgdssg nilvwgkgtn risyavpgah eggifalcml rdgtlvsggg
      481 kdrkliswdg nyqklhktei peqfgpirtv aegkgdvili gttrnfvlqg tlsgdftpit
      541 qghtdelwgl aihaskpqfl tcghdrhatl wdavghrpvw dkiiedpaqs sgfhpsgsvv
      601 avgtltgrwf vfdtetkdlv tvhtdgneql svmryspdgn flaigshdnc iyiygvsdng
      661 rkytrvgkcs ghssfithld wsvnsqflvs nsgdyeilyw vpsackqvvs vettrdiewa
      721 tytctlgfhv fgvwpegsdg tdinaasrah ekkllstgdd fgkvhlfsyp csqfrapshv
      781 ysghsshvtn vaflcddshl istggkdtsi mqwrvv
//
LOCUS       XP_061015389             805 aa            linear   MAM 02-DEC-2023
DEFINITION  echinoderm microtubule-associated protein-like 1 isoform X3 [Dama
            dama].
ACCESSION   XP_061015389
VERSION     XP_061015389.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159406.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..805
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..805
                     /product="echinoderm microtubule-associated protein-like 1
                     isoform X3"
                     /calculated_mol_wt=88505
     Region          12..67
                     /region_name="TD_EMAP1"
                     /note="trimerization domain of echinoderm
                     microtubule-associated protein-like 1; cd21947"
                     /db_xref="CDD:409268"
     Site            order(22..23,25..26,29..30,32..33,36..37,39..40,43..44,
                     46..47,50..51,53..55,57..58,60)
                     /site_type="other"
                     /note="putative trimer interface [polypeptide binding]"
                     /db_xref="CDD:409268"
     Region          177..248
                     /region_name="HELP"
                     /note="HELP motif; pfam03451"
                     /db_xref="CDD:460922"
     Region          251..299
                     /region_name="WD40"
                     /note="WD domain, G-beta repeat; pfam00400"
                     /db_xref="CDD:459801"
     Region          264..313
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          318..380
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          334..689
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          412..447
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          453..518
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          537..572
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          618..659
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          665..689
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          732..771
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          766..802
                     /region_name="WD40"
                     /note="WD domain, G-beta repeat; pfam00400"
                     /db_xref="CDD:459801"
     Region          777..804
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..805
                     /gene="EML1"
                     /coded_by="XM_061159406.1:50..2467"
                     /db_xref="GeneID:133068233"
ORIGIN      
        1 mvgwhhrlng hdsasaassm evtdriasle qrvqmqeddi qllksaladv vrrlniteeq
       61 qavlnrkgpt karplvqtlp lrttvnngav vpkkasgslp appgarreaa apattkstik
      121 rtssservsp ggrresygds kgnrnrtgst sssssgkkns eskpkepvfs aeegyvkmfl
      181 rgrpvtmymp kdqvdsynle akvelptkrl klewvygyrg rdcrnnlyll ptgetvyfia
      241 svvvlynvee qlqrhylghn ddvkclavhp drvtiatgqv agtskdgkqq lpphvriwds
      301 vtlntlhvig igffdravtc iafsksnggs nlcavddsnd hvlsvwdwqk eerladvkcs
      361 neavfaadfh ptdtniivtc gkshlyfwtl egsslikkqg lfekqekpkf vlcvtfseng
      421 dtitgdssgn ilvwgkgtnr isyavpgahe ggifalcmlr dgtlvsgggk drkliswdgn
      481 yqklhkteip eqfgpirtva egkgdvilig ttrnfvlqgt lsgdftpitq ghtdelwgla
      541 ihaskpqflt cghdrhatlw davghrpvwd kiiedpaqss gfhpsgsvva vgtltgrwfv
      601 fdtetkdlvt vhtdgneqls vmryspdgnf laigshdnci yiygvsdngr kytrvgkcsg
      661 hssfithldw svnsqflvsn sgdyeilywv psackqvvsv ettrdiewat ytctlgfhvf
      721 gvwpegsdgt dinaasrahe kkllstgddf gkvhlfsypc sqfrapshvy sghsshvtnv
      781 aflcddshli stggkdtsim qwrvv
//
LOCUS       XP_061015390             804 aa            linear   MAM 02-DEC-2023
DEFINITION  echinoderm microtubule-associated protein-like 1 isoform X4 [Dama
            dama].
ACCESSION   XP_061015390
VERSION     XP_061015390.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159407.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..804
                     /product="echinoderm microtubule-associated protein-like 1
                     isoform X4"
                     /calculated_mol_wt=88126
     Region          19..66
                     /region_name="TD_EMAP1"
                     /note="trimerization domain of echinoderm
                     microtubule-associated protein-like 1; cd21947"
                     /db_xref="CDD:409268"
     Site            order(21..22,24..25,28..29,31..32,35..36,38..39,42..43,
                     45..46,49..50,52..54,56..57,59)
                     /site_type="other"
                     /note="putative trimer interface [polypeptide binding]"
                     /db_xref="CDD:409268"
     Region          176..247
                     /region_name="HELP"
                     /note="HELP motif; pfam03451"
                     /db_xref="CDD:460922"
     Region          250..298
                     /region_name="WD40"
                     /note="WD domain, G-beta repeat; pfam00400"
                     /db_xref="CDD:459801"
     Region          263..312
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          317..379
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          333..688
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          411..446
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          452..517
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          536..571
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          617..658
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          664..688
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          731..770
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          765..801
                     /region_name="WD40"
                     /note="WD domain, G-beta repeat; pfam00400"
                     /db_xref="CDD:459801"
     Region          776..803
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..804
                     /gene="EML1"
                     /coded_by="XM_061159407.1:114..2528"
                     /db_xref="GeneID:133068233"
ORIGIN      
        1 msdgegpsad dsasaassme vtdriasleq rvqmqeddiq llksaladvv rrlniteeqq
       61 avlnrkgptk arplvqtlpl rttvnngavv pkkasgslpa ppgarreaaa pattkstikr
      121 tssservspg grresygdsk gnrnrtgsts ssssgkknse skpkepvfsa eegyvkmflr
      181 grpvtmympk dqvdsynlea kvelptkrlk lewvygyrgr dcrnnlyllp tgetvyfias
      241 vvvlynveeq lqrhylghnd dvkclavhpd rvtiatgqva gtskdgkqql pphvriwdsv
      301 tlntlhvigi gffdravtci afsksnggsn lcavddsndh vlsvwdwqke erladvkcsn
      361 eavfaadfhp tdtniivtcg kshlyfwtle gsslikkqgl fekqekpkfv lcvtfsengd
      421 titgdssgni lvwgkgtnri syavpgaheg gifalcmlrd gtlvsgggkd rkliswdgny
      481 qklhkteipe qfgpirtvae gkgdviligt trnfvlqgtl sgdftpitqg htdelwglai
      541 haskpqfltc ghdrhatlwd avghrpvwdk iiedpaqssg fhpsgsvvav gtltgrwfvf
      601 dtetkdlvtv htdgneqlsv mryspdgnfl aigshdnciy iygvsdngrk ytrvgkcsgh
      661 ssfithldws vnsqflvsns gdyeilywvp sackqvvsve ttrdiewaty tctlgfhvfg
      721 vwpegsdgtd inaasrahek kllstgddfg kvhlfsypcs qfrapshvys ghsshvtnva
      781 flcddshlis tggkdtsimq wrvv
//
LOCUS       XP_061015391             786 aa            linear   MAM 02-DEC-2023
DEFINITION  echinoderm microtubule-associated protein-like 1 isoform X5 [Dama
            dama].
ACCESSION   XP_061015391
VERSION     XP_061015391.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159408.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..786
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..786
                     /product="echinoderm microtubule-associated protein-like 1
                     isoform X5"
                     /calculated_mol_wt=86503
     Region          1..48
                     /region_name="TD_EMAP1"
                     /note="trimerization domain of echinoderm
                     microtubule-associated protein-like 1; cd21947"
                     /db_xref="CDD:409268"
     Site            order(3..4,6..7,10..11,13..14,17..18,20..21,24..25,27..28,
                     31..32,34..36,38..39,41)
                     /site_type="other"
                     /note="putative trimer interface [polypeptide binding]"
                     /db_xref="CDD:409268"
     Region          158..229
                     /region_name="HELP"
                     /note="HELP motif; pfam03451"
                     /db_xref="CDD:460922"
     Region          232..280
                     /region_name="WD40"
                     /note="WD domain, G-beta repeat; pfam00400"
                     /db_xref="CDD:459801"
     Region          245..294
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          299..361
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          315..670
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          393..428
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          434..499
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          518..553
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          599..640
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          646..670
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          713..752
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          747..783
                     /region_name="WD40"
                     /note="WD domain, G-beta repeat; pfam00400"
                     /db_xref="CDD:459801"
     Region          758..785
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..786
                     /gene="EML1"
                     /coded_by="XM_061159408.1:172..2532"
                     /db_xref="GeneID:133068233"
ORIGIN      
        1 mevtdriasl eqrvqmqedd iqllksalad vvrrlnitee qqavlnrkgp tkarplvqtl
       61 plrttvnnga vvpkkasgsl pappgarrea aapattksti krtssservs pggrresygd
      121 skgnrnrtgs tsssssgkkn seskpkepvf saeegyvkmf lrgrpvtmym pkdqvdsynl
      181 eakvelptkr lklewvygyr grdcrnnlyl lptgetvyfi asvvvlynve eqlqrhylgh
      241 nddvkclavh pdrvtiatgq vagtskdgkq qlpphvriwd svtlntlhvi gigffdravt
      301 ciafsksngg snlcavddsn dhvlsvwdwq keerladvkc sneavfaadf hptdtniivt
      361 cgkshlyfwt legsslikkq glfekqekpk fvlcvtfsen gdtitgdssg nilvwgkgtn
      421 risyavpgah eggifalcml rdgtlvsggg kdrkliswdg nyqklhktei peqfgpirtv
      481 aegkgdvili gttrnfvlqg tlsgdftpit qghtdelwgl aihaskpqfl tcghdrhatl
      541 wdavghrpvw dkiiedpaqs sgfhpsgsvv avgtltgrwf vfdtetkdlv tvhtdgneql
      601 svmryspdgn flaigshdnc iyiygvsdng rkytrvgkcs ghssfithld wsvnsqflvs
      661 nsgdyeilyw vpsackqvvs vettrdiewa tytctlgfhv fgvwpegsdg tdinaasrah
      721 ekkllstgdd fgkvhlfsyp csqfrapshv ysghsshvtn vaflcddshl istggkdtsi
      781 mqwrvv
//
LOCUS       XP_061015392             433 aa            linear   MAM 02-DEC-2023
DEFINITION  ena/VASP-like protein isoform X1 [Dama dama].
ACCESSION   XP_061015392
VERSION     XP_061015392.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159409.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..433
                     /product="ena/VASP-like protein isoform X1"
                     /calculated_mol_wt=46456
     Region          7..115
                     /region_name="EVH1_Ena_VASP-like"
                     /note="Enabled/VASP family EVH1 domain; cd01207"
                     /db_xref="CDD:269918"
     Site            order(18,25,72,74,80,82,84)
                     /site_type="other"
                     /note="proline-rich peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269918"
     Region          382..>409
                     /region_name="VASP_tetra"
                     /note="VASP tetramerization domain; pfam08776"
                     /db_xref="CDD:462599"
     CDS             1..433
                     /gene="EVL"
                     /coded_by="XM_061159409.1:147..1448"
                     /db_xref="GeneID:133068234"
ORIGIN      
        1 masieqsicq arasvmvydd tskkwvpikp gqqgfsrini yhntasntfr vvgvklqdqq
       61 vvinysivkg lkynqatptf hqwrdarqvy glnfaskeea ttfsnamlfa lnimnsqegg
      121 pssqrqvqng pspdemdiqr rqvmeqqqhq qrqeslerrt satgpslppg hpssaasapl
      181 lcsgpppppp ppvpppptga tpppppplpa ggaqgashde ssvsglaaal agaklrrvqr
      241 pedasggssp sgpsksdanr assggggggl meemnkllak rrkaasqtdk padkkedesq
      301 teepstspsp gtraasqqpl ssseasrkpw ersgsaekpm ssllsrtpsv akspeakspl
      361 qsqphsrmkp agsvndvald aldldrmkqe ileevvrelh kvkeeiidah sglpvfwlgr
      421 lrrprqikel vqv
//
LOCUS       XP_061015393             420 aa            linear   MAM 02-DEC-2023
DEFINITION  ena/VASP-like protein isoform X2 [Dama dama].
ACCESSION   XP_061015393
VERSION     XP_061015393.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159410.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..420
                     /product="ena/VASP-like protein isoform X2"
                     /calculated_mol_wt=44761
     Region          7..115
                     /region_name="EVH1_Ena_VASP-like"
                     /note="Enabled/VASP family EVH1 domain; cd01207"
                     /db_xref="CDD:269918"
     Site            order(18,25,72,74,80,82,84)
                     /site_type="other"
                     /note="proline-rich peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269918"
     Region          382..415
                     /region_name="VASP_tetra"
                     /note="VASP tetramerization domain; pfam08776"
                     /db_xref="CDD:462599"
     CDS             1..420
                     /gene="EVL"
                     /coded_by="XM_061159410.1:147..1409"
                     /db_xref="GeneID:133068234"
ORIGIN      
        1 masieqsicq arasvmvydd tskkwvpikp gqqgfsrini yhntasntfr vvgvklqdqq
       61 vvinysivkg lkynqatptf hqwrdarqvy glnfaskeea ttfsnamlfa lnimnsqegg
      121 pssqrqvqng pspdemdiqr rqvmeqqqhq qrqeslerrt satgpslppg hpssaasapl
      181 lcsgpppppp ppvpppptga tpppppplpa ggaqgashde ssvsglaaal agaklrrvqr
      241 pedasggssp sgpsksdanr assggggggl meemnkllak rrkaasqtdk padkkedesq
      301 teepstspsp gtraasqqpl ssseasrkpw ersgsaekpm ssllsrtpsv akspeakspl
      361 qsqphsrmkp agsvndvald aldldrmkqe ileevvrelh kvkeeiidai rqelsgists
//
LOCUS       XP_061015394             418 aa            linear   MAM 02-DEC-2023
DEFINITION  ena/VASP-like protein isoform X3 [Dama dama].
ACCESSION   XP_061015394
VERSION     XP_061015394.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159411.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..418
                     /product="ena/VASP-like protein isoform X3"
                     /calculated_mol_wt=44880
     Region          1..100
                     /region_name="EVH1_Ena_VASP-like"
                     /note="Enabled/VASP family EVH1 domain; cd01207"
                     /db_xref="CDD:269918"
     Site            order(3,10,57,59,65,67,69)
                     /site_type="other"
                     /note="proline-rich peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269918"
     Region          367..>394
                     /region_name="VASP_tetra"
                     /note="VASP tetramerization domain; pfam08776"
                     /db_xref="CDD:462599"
     CDS             1..418
                     /gene="EVL"
                     /coded_by="XM_061159411.1:327..1583"
                     /db_xref="GeneID:133068234"
ORIGIN      
        1 mvyddtskkw vpikpgqqgf sriniyhnta sntfrvvgvk lqdqqvviny sivkglkynq
       61 atptfhqwrd arqvyglnfa skeeattfsn amlfalnimn sqeggpssqr qvqngpspde
      121 mdiqrrqvme qqqhqqrqes lerrtsatgp slppghpssa asapllcsgp pppppppvpp
      181 pptgatpppp pplpaggaqg ashdessvsg laaalagakl rrvqrpedas ggsspsgpsk
      241 sdanrassgg gggglmeemn kllakrrkaa sqtdkpadkk edesqteeps tspspgtraa
      301 sqqplsssea srkpwersgs aekpmsslls rtpsvakspe aksplqsqph srmkpagsvn
      361 dvaldaldld rmkqeileev vrelhkvkee iidahsglpv fwlgrlrrpr qikelvqv
//
LOCUS       XP_061015395             412 aa            linear   MAM 02-DEC-2023
DEFINITION  ena/VASP-like protein isoform X4 [Dama dama].
ACCESSION   XP_061015395
VERSION     XP_061015395.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159412.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..412
                     /product="ena/VASP-like protein isoform X4"
                     /calculated_mol_wt=44242
     Region          7..115
                     /region_name="EVH1_Ena_VASP-like"
                     /note="Enabled/VASP family EVH1 domain; cd01207"
                     /db_xref="CDD:269918"
     Site            order(18,25,72,74,80,82,84)
                     /site_type="other"
                     /note="proline-rich peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269918"
     Region          361..>388
                     /region_name="VASP_tetra"
                     /note="VASP tetramerization domain; pfam08776"
                     /db_xref="CDD:462599"
     CDS             1..412
                     /gene="EVL"
                     /coded_by="XM_061159412.1:151..1389"
                     /db_xref="GeneID:133068234"
ORIGIN      
        1 masieqsicq arasvmvydd tskkwvpikp gqqgfsrini yhntasntfr vvgvklqdqq
       61 vvinysivkg lkynqatptf hqwrdarqvy glnfaskeea ttfsnamlfa lnimnsqegg
      121 pssqrqvqng pspdemdiqr rqvmeqqqhq qrqeslerrt satgpslppg hpssaasapl
      181 lcsgpppppp ppvpppptga tpppppplpa ggaqgashde ssvsglaaal agaklrrvqr
      241 pedasggssp sgpsksdanr assggggggl meemnkllak rrkaasqtdk padkkedesq
      301 teepstspsp gtraasqqpl ssseasrkpw ersgsaekpm ssllsrmkpa gsvndvalda
      361 ldldrmkqei leevvrelhk vkeeiidahs glpvfwlgrl rrprqikelv qv
//
LOCUS       XP_061015396             399 aa            linear   MAM 02-DEC-2023
DEFINITION  ena/VASP-like protein isoform X5 [Dama dama].
ACCESSION   XP_061015396
VERSION     XP_061015396.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159413.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..399
                     /product="ena/VASP-like protein isoform X5"
                     /calculated_mol_wt=42547
     Region          7..115
                     /region_name="EVH1_Ena_VASP-like"
                     /note="Enabled/VASP family EVH1 domain; cd01207"
                     /db_xref="CDD:269918"
     Site            order(18,25,72,74,80,82,84)
                     /site_type="other"
                     /note="proline-rich peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269918"
     Region          361..394
                     /region_name="VASP_tetra"
                     /note="VASP tetramerization domain; pfam08776"
                     /db_xref="CDD:462599"
     CDS             1..399
                     /gene="EVL"
                     /coded_by="XM_061159413.1:147..1346"
                     /db_xref="GeneID:133068234"
ORIGIN      
        1 masieqsicq arasvmvydd tskkwvpikp gqqgfsrini yhntasntfr vvgvklqdqq
       61 vvinysivkg lkynqatptf hqwrdarqvy glnfaskeea ttfsnamlfa lnimnsqegg
      121 pssqrqvqng pspdemdiqr rqvmeqqqhq qrqeslerrt satgpslppg hpssaasapl
      181 lcsgpppppp ppvpppptga tpppppplpa ggaqgashde ssvsglaaal agaklrrvqr
      241 pedasggssp sgpsksdanr assggggggl meemnkllak rrkaasqtdk padkkedesq
      301 teepstspsp gtraasqqpl ssseasrkpw ersgsaekpm ssllsrmkpa gsvndvalda
      361 ldldrmkqei leevvrelhk vkeeiidair qelsgists
//
LOCUS       XP_061015397             323 aa            linear   MAM 02-DEC-2023
DEFINITION  sphingolipid delta(4)-desaturase/C4-monooxygenase DES2 [Dama dama].
ACCESSION   XP_061015397
VERSION     XP_061015397.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159414.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..323
                     /product="sphingolipid
                     delta(4)-desaturase/C4-monooxygenase DES2"
                     /calculated_mol_wt=37026
     Region          6..42
                     /region_name="Lipid_DES"
                     /note="Sphingolipid Delta4-desaturase (DES); pfam08557"
                     /db_xref="CDD:462517"
     Region          26..314
                     /region_name="Delta4-sphingolipid-FADS-like"
                     /note="The Delta4-sphingolipid Fatty Acid Desaturase
                     (Delta4-sphingolipid-FADS)-like CD includes the
                     integral-membrane enzymes, dihydroceramide Delta-4
                     desaturase, involved in the synthesis of sphingosine; and
                     the human membrane fatty acid (lipid) desaturase...;
                     cd03508"
                     /db_xref="CDD:239585"
     Site            order(89,93,128,131..132,259,262..263)
                     /site_type="other"
                     /note="putative di-iron ligands [ion binding]"
                     /db_xref="CDD:239585"
     CDS             1..323
                     /gene="DEGS2"
                     /coded_by="XM_061159414.1:91..1062"
                     /db_xref="GeneID:133068235"
ORIGIN      
        1 mgnsagrsdf ewvytdqpht qrrkemlaky paikalmrpd phlkwtvtgm vlvqllacwl
       61 vrglawrwlf fwayafggcv nhsltlaihd ishntafgtg raahnrwfai fanlpvglpy
      121 aatfkkyhvd hhrylggdgl dvdvptrfeg wlfctparkl lwlvlqpffy alrplcvhpk
      181 amtrmelcna lvqlaadati yalwglkpvv yllassllgl glhpisghfv aehymflkgh
      241 etysyygpln witfnvgyhm ehhdfpsipg cnlplvrkia peyydhlpqh hswvkvlwdf
      301 vfddslgpfa rvkrvcklae nhl
//
LOCUS       XP_061015398             206 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133068237 [Dama dama].
ACCESSION   XP_061015398
VERSION     XP_061015398.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159415.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..206
                     /product="uncharacterized protein LOC133068237"
                     /calculated_mol_wt=20810
     CDS             1..206
                     /gene="LOC133068237"
                     /coded_by="XM_061159415.1:238..858"
                     /db_xref="GeneID:133068237"
ORIGIN      
        1 msgrngqccc pevtgdvavs eeepppqslc qesrarawar pagqglcvse glapwprgav
       61 lgdrlgpypl qgsgrapgsr pvarlrqslr sglggpplae alrvlasslp pavsalsptv
      121 dsvtlglsll iagesagspa clfpathtls sqpdaralga cgadarprsl plrapshlpp
      181 gskvalraar aprpetgfsv gsprdp
//
LOCUS       XP_061015399             414 aa            linear   MAM 02-DEC-2023
DEFINITION  transcriptional repressor protein YY1 [Dama dama].
ACCESSION   XP_061015399
VERSION     XP_061015399.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159416.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..414
                     /product="transcriptional repressor protein YY1"
                     /calculated_mol_wt=44481
     Region          <268..407
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          298..320
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          327..347
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(332,334,336,338..339,342..343,346,362,364,368..369,
                     372..373,376,392,394,396,398..399,402..403,406)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          355..377
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          385..407
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..414
                     /gene="YY1"
                     /coded_by="XM_061159416.1:100..1344"
                     /db_xref="GeneID:133068239"
ORIGIN      
        1 masgdtlyia tdgsempaei velheievet ipvetiettv vgeeeedddd dedggggdhg
       61 gggghghagh hhhhhhhhhh ppmialqplv tddptqvhhh qevilvqtre evvggddsdg
      121 lraedgfedq ilipvpapag gdddyieqtl vtvaaagksg gggggssssg ggrvkkgggk
      181 ksgkkgylgg gagaaggada gnkkweqkqv qiktlegefs vtmwssdekk didhetvvee
      241 qiigensppd yseymtgkkl ppggipgidl sdpkqlaefa rmkprkiked daprtiacph
      301 kgctkmfrdn samrkhlhth gprvhvcaec gkafvesskl krhqlvhtge kpfqctfegc
      361 gkrfsldfnl rthvrihtgd rpyvcpfdgc nkkfaqstnl kshilthaka knnq
//
LOCUS       XP_061015401             335 aa            linear   MAM 02-DEC-2023
DEFINITION  mitochondrial basic amino acids transporter isoform X1 [Dama dama].
ACCESSION   XP_061015401
VERSION     XP_061015401.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159418.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..335
                     /product="mitochondrial basic amino acids transporter
                     isoform X1"
                     /calculated_mol_wt=35588
     Region          <64..116
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          125..217
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          222..305
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     CDS             1..335
                     /gene="SLC25A29"
                     /coded_by="XM_061159418.1:1660..2667"
                     /db_xref="GeneID:133068240"
ORIGIN      
        1 maqissplpg ipkatessla pclmgpnsgl lervspgvlr agprelgtlt prghltytgs
       61 sfqvrlqvqs vekpqyrgtl hcfqaiikqe svlglyrglg spllgltfin alvfgvqgnt
      121 lralgrdspl nqflagaaag aiqcviccpm elaktrlqlq eagpartyrg pldclaqiyr
      181 qeglrgvnrg mastllretp sfgvyfltyd vltralgcep gdrllvpkll laggtsgias
      241 wlstypvdvv ksrlqadglq gapryrgivd cvqqsyhaeg wrvftrglas tllrafpvna
      301 atfatvtvvl syargeearl egdagsaala qpssl
//
LOCUS       XP_061015402             298 aa            linear   MAM 02-DEC-2023
DEFINITION  mitochondrial basic amino acids transporter isoform X2 [Dama dama].
ACCESSION   XP_061015402
VERSION     XP_061015402.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159419.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..298
                     /product="mitochondrial basic amino acids transporter
                     isoform X2"
                     /calculated_mol_wt=31630
     Region          1..79
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          88..180
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          185..268
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     CDS             1..298
                     /gene="SLC25A29"
                     /coded_by="XM_061159419.1:163..1059"
                     /db_xref="GeneID:133068240"
ORIGIN      
        1 maldflagca ggvagvlvgh pfdtvkvrlq vqsvekpqyr gtlhcfqaii kqesvlglyr
       61 glgspllglt finalvfgvq gntlralgrd splnqflaga aagaiqcvic cpmelaktrl
      121 qlqeagpart yrgpldclaq iyrqeglrgv nrgmastllr etpsfgvyfl tydvltralg
      181 cepgdrllvp klllaggtsg iaswlstypv dvvksrlqad glqgapryrg ivdcvqqsyh
      241 aegwrvftrg lastllrafp vnaatfatvt vvlsyargee arlegdagsa alaqpssl
//
LOCUS       XP_061015403             539 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 25 [Dama dama].
ACCESSION   XP_061015403
VERSION     XP_061015403.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159420.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..539
                     /product="WD repeat-containing protein 25"
                     /calculated_mol_wt=58869
     Region          234..538
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(240,261,265,271..272,285..286,304,308,314..315,
                     325..326,345,350,356..357,370,388,399,405..406,418..419,
                     438,442,452..453,464..465,484,489,495..496,508..509,528,
                     532,538)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          246..285
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          291..325
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          331..368
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          375..417
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          424..463
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          471..507
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          513..538
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..539
                     /gene="WDR25"
                     /coded_by="XM_061159420.1:175..1794"
                     /db_xref="GeneID:133068241"
ORIGIN      
        1 maslvayeds dseaetelag gfhpagqmed tsatvrppgq dfgsrvldat ggrvpspecg
       61 srddparcrl plarlwsqdp gscpsqrlrw prpepeaafp asppacpslw tsqapaghvp
      121 lagaclkqvr vcwepsgspe lsvgaragse gpgksgsslq rkrredcvvp ytpkrlrplp
      181 vphtgadggk daeargprag rvpaplcvap easefiqpyl dsqyketkip kkvlfhlrgh
      241 egpvnsvqwc pvsarshlll stsmdktfkv wnavdsgscl qtyslhseav raarwspcgr
      301 rilsggfdfa lhltdletgt qlfsgqsdfr ittlkfhprd psvfvcggfs semkawdirt
      361 skvvrsykat iqqtldilfl regseflsst dassrdsadr tiiawdfqss akisnqifhe
      421 rytcpsltlh prepvflaqt ngnylalfsa vwpyrmsrrr ryeghkvegy svgcecspdg
      481 dllltgsadg rilvysfrta srartlhght qacvgatfhp vlpsvlatcs wegdvkiwh
//
LOCUS       XP_061015404             539 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 25 [Dama dama].
ACCESSION   XP_061015404
VERSION     XP_061015404.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159421.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..539
                     /product="WD repeat-containing protein 25"
                     /calculated_mol_wt=58869
     Region          234..538
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(240,261,265,271..272,285..286,304,308,314..315,
                     325..326,345,350,356..357,370,388,399,405..406,418..419,
                     438,442,452..453,464..465,484,489,495..496,508..509,528,
                     532,538)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          246..285
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          291..325
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          331..368
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          375..417
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          424..463
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          471..507
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          513..538
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..539
                     /gene="WDR25"
                     /coded_by="XM_061159421.1:104..1723"
                     /db_xref="GeneID:133068241"
ORIGIN      
        1 maslvayeds dseaetelag gfhpagqmed tsatvrppgq dfgsrvldat ggrvpspecg
       61 srddparcrl plarlwsqdp gscpsqrlrw prpepeaafp asppacpslw tsqapaghvp
      121 lagaclkqvr vcwepsgspe lsvgaragse gpgksgsslq rkrredcvvp ytpkrlrplp
      181 vphtgadggk daeargprag rvpaplcvap easefiqpyl dsqyketkip kkvlfhlrgh
      241 egpvnsvqwc pvsarshlll stsmdktfkv wnavdsgscl qtyslhseav raarwspcgr
      301 rilsggfdfa lhltdletgt qlfsgqsdfr ittlkfhprd psvfvcggfs semkawdirt
      361 skvvrsykat iqqtldilfl regseflsst dassrdsadr tiiawdfqss akisnqifhe
      421 rytcpsltlh prepvflaqt ngnylalfsa vwpyrmsrrr ryeghkvegy svgcecspdg
      481 dllltgsadg rilvysfrta srartlhght qacvgatfhp vlpsvlatcs wegdvkiwh
//
LOCUS       XP_061015405             539 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 25 [Dama dama].
ACCESSION   XP_061015405
VERSION     XP_061015405.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159422.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..539
                     /product="WD repeat-containing protein 25"
                     /calculated_mol_wt=58869
     Region          234..538
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(240,261,265,271..272,285..286,304,308,314..315,
                     325..326,345,350,356..357,370,388,399,405..406,418..419,
                     438,442,452..453,464..465,484,489,495..496,508..509,528,
                     532,538)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          246..285
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          291..325
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          331..368
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          375..417
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          424..463
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          471..507
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          513..538
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..539
                     /gene="WDR25"
                     /coded_by="XM_061159422.1:613..2232"
                     /db_xref="GeneID:133068241"
ORIGIN      
        1 maslvayeds dseaetelag gfhpagqmed tsatvrppgq dfgsrvldat ggrvpspecg
       61 srddparcrl plarlwsqdp gscpsqrlrw prpepeaafp asppacpslw tsqapaghvp
      121 lagaclkqvr vcwepsgspe lsvgaragse gpgksgsslq rkrredcvvp ytpkrlrplp
      181 vphtgadggk daeargprag rvpaplcvap easefiqpyl dsqyketkip kkvlfhlrgh
      241 egpvnsvqwc pvsarshlll stsmdktfkv wnavdsgscl qtyslhseav raarwspcgr
      301 rilsggfdfa lhltdletgt qlfsgqsdfr ittlkfhprd psvfvcggfs semkawdirt
      361 skvvrsykat iqqtldilfl regseflsst dassrdsadr tiiawdfqss akisnqifhe
      421 rytcpsltlh prepvflaqt ngnylalfsa vwpyrmsrrr ryeghkvegy svgcecspdg
      481 dllltgsadg rilvysfrta srartlhght qacvgatfhp vlpsvlatcs wegdvkiwh
//
LOCUS       XP_061015406             539 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 25 [Dama dama].
ACCESSION   XP_061015406
VERSION     XP_061015406.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159423.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..539
                     /product="WD repeat-containing protein 25"
                     /calculated_mol_wt=58869
     Region          234..538
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(240,261,265,271..272,285..286,304,308,314..315,
                     325..326,345,350,356..357,370,388,399,405..406,418..419,
                     438,442,452..453,464..465,484,489,495..496,508..509,528,
                     532,538)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          246..285
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          291..325
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          331..368
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          375..417
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          424..463
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          471..507
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          513..538
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..539
                     /gene="WDR25"
                     /coded_by="XM_061159423.1:761..2380"
                     /db_xref="GeneID:133068241"
ORIGIN      
        1 maslvayeds dseaetelag gfhpagqmed tsatvrppgq dfgsrvldat ggrvpspecg
       61 srddparcrl plarlwsqdp gscpsqrlrw prpepeaafp asppacpslw tsqapaghvp
      121 lagaclkqvr vcwepsgspe lsvgaragse gpgksgsslq rkrredcvvp ytpkrlrplp
      181 vphtgadggk daeargprag rvpaplcvap easefiqpyl dsqyketkip kkvlfhlrgh
      241 egpvnsvqwc pvsarshlll stsmdktfkv wnavdsgscl qtyslhseav raarwspcgr
      301 rilsggfdfa lhltdletgt qlfsgqsdfr ittlkfhprd psvfvcggfs semkawdirt
      361 skvvrsykat iqqtldilfl regseflsst dassrdsadr tiiawdfqss akisnqifhe
      421 rytcpsltlh prepvflaqt ngnylalfsa vwpyrmsrrr ryeghkvegy svgcecspdg
      481 dllltgsadg rilvysfrta srartlhght qacvgatfhp vlpsvlatcs wegdvkiwh
//
LOCUS       XP_061015407             539 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 25 [Dama dama].
ACCESSION   XP_061015407
VERSION     XP_061015407.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159424.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..539
                     /product="WD repeat-containing protein 25"
                     /calculated_mol_wt=58869
     Region          234..538
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(240,261,265,271..272,285..286,304,308,314..315,
                     325..326,345,350,356..357,370,388,399,405..406,418..419,
                     438,442,452..453,464..465,484,489,495..496,508..509,528,
                     532,538)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          246..285
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          291..325
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          331..368
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          375..417
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          424..463
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          471..507
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          513..538
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..539
                     /gene="WDR25"
                     /coded_by="XM_061159424.1:190..1809"
                     /db_xref="GeneID:133068241"
ORIGIN      
        1 maslvayeds dseaetelag gfhpagqmed tsatvrppgq dfgsrvldat ggrvpspecg
       61 srddparcrl plarlwsqdp gscpsqrlrw prpepeaafp asppacpslw tsqapaghvp
      121 lagaclkqvr vcwepsgspe lsvgaragse gpgksgsslq rkrredcvvp ytpkrlrplp
      181 vphtgadggk daeargprag rvpaplcvap easefiqpyl dsqyketkip kkvlfhlrgh
      241 egpvnsvqwc pvsarshlll stsmdktfkv wnavdsgscl qtyslhseav raarwspcgr
      301 rilsggfdfa lhltdletgt qlfsgqsdfr ittlkfhprd psvfvcggfs semkawdirt
      361 skvvrsykat iqqtldilfl regseflsst dassrdsadr tiiawdfqss akisnqifhe
      421 rytcpsltlh prepvflaqt ngnylalfsa vwpyrmsrrr ryeghkvegy svgcecspdg
      481 dllltgsadg rilvysfrta srartlhght qacvgatfhp vlpsvlatcs wegdvkiwh
//
LOCUS       XP_061015408             473 aa            linear   MAM 02-DEC-2023
DEFINITION  tryptophan--tRNA ligase, cytoplasmic [Dama dama].
ACCESSION   XP_061015408
VERSION     XP_061015408.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159425.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..473
                     /product="tryptophan--tRNA ligase, cytoplasmic"
                     /calculated_mol_wt=53374
     Region          14..66
                     /region_name="WHEP-TRS"
                     /note="WHEP-TRS domain; pfam00458"
                     /db_xref="CDD:459819"
     Region          87..468
                     /region_name="PLN02486"
                     /note="aminoacyl-tRNA ligase"
                     /db_xref="CDD:178104"
     Site            order(161..165,172,174..175,178,196,201,239,282,286,289,
                     309,311..312,314..315,318,341,351..352,354)
                     /site_type="active"
                     /db_xref="CDD:173903"
     Site            172..175
                     /site_type="other"
                     /note="HIGH motif"
                     /db_xref="CDD:173903"
     Site            order(200,203..204,249..250,252..254,257..258,260..263,
                     265..266,278,280..281,284..285)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:173903"
     Site            351..355
                     /site_type="other"
                     /note="KMSKS motif"
                     /db_xref="CDD:173903"
     CDS             1..473
                     /gene="WARS1"
                     /coded_by="XM_061159425.1:206..1627"
                     /db_xref="GeneID:133068242"
ORIGIN      
        1 mpnsqqgcgs plelfhsiaa qgelvrglka rnaakdeids avkmllslkt sykaatgedy
       61 nvdcppgdpa pesgeglaat dadedfvdpw tvqtssakgi dydklivrfg sskidkelvn
      121 riervtgqrp hrflrrgiff shrdmhqild ayenkkpfyl ytgrgpssea mhvghlipfi
      181 ftkwlqdvfn vplviqmtdd ekylwkdltl eqaygyaven akdiiacgfd ikktfifsdl
      241 dymgmspgfy knvvkiqkhv tfnqvkgifg fndsdcigki sfpaiqaaps fsnsfpqifr
      301 drtdvqclip caidqdpyfr mtrdvaprig ypkpallhst ffpalqgaqt kmsasdpnss
      361 ifltdtakqi ktkvnkhafs ggrdtveehr qfggncdvdv sfmyltffle dddkleqirk
      421 dytsgamltg elkqelievl qpliaehqar rkevtdeivk efmtprklfy dfq
//
LOCUS       XP_061015409             473 aa            linear   MAM 02-DEC-2023
DEFINITION  tryptophan--tRNA ligase, cytoplasmic [Dama dama].
ACCESSION   XP_061015409
VERSION     XP_061015409.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159426.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..473
                     /product="tryptophan--tRNA ligase, cytoplasmic"
                     /calculated_mol_wt=53374
     Region          14..66
                     /region_name="WHEP-TRS"
                     /note="WHEP-TRS domain; pfam00458"
                     /db_xref="CDD:459819"
     Region          87..468
                     /region_name="PLN02486"
                     /note="aminoacyl-tRNA ligase"
                     /db_xref="CDD:178104"
     Site            order(161..165,172,174..175,178,196,201,239,282,286,289,
                     309,311..312,314..315,318,341,351..352,354)
                     /site_type="active"
                     /db_xref="CDD:173903"
     Site            172..175
                     /site_type="other"
                     /note="HIGH motif"
                     /db_xref="CDD:173903"
     Site            order(200,203..204,249..250,252..254,257..258,260..263,
                     265..266,278,280..281,284..285)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:173903"
     Site            351..355
                     /site_type="other"
                     /note="KMSKS motif"
                     /db_xref="CDD:173903"
     CDS             1..473
                     /gene="WARS1"
                     /coded_by="XM_061159426.1:211..1632"
                     /db_xref="GeneID:133068242"
ORIGIN      
        1 mpnsqqgcgs plelfhsiaa qgelvrglka rnaakdeids avkmllslkt sykaatgedy
       61 nvdcppgdpa pesgeglaat dadedfvdpw tvqtssakgi dydklivrfg sskidkelvn
      121 riervtgqrp hrflrrgiff shrdmhqild ayenkkpfyl ytgrgpssea mhvghlipfi
      181 ftkwlqdvfn vplviqmtdd ekylwkdltl eqaygyaven akdiiacgfd ikktfifsdl
      241 dymgmspgfy knvvkiqkhv tfnqvkgifg fndsdcigki sfpaiqaaps fsnsfpqifr
      301 drtdvqclip caidqdpyfr mtrdvaprig ypkpallhst ffpalqgaqt kmsasdpnss
      361 ifltdtakqi ktkvnkhafs ggrdtveehr qfggncdvdv sfmyltffle dddkleqirk
      421 dytsgamltg elkqelievl qpliaehqar rkevtdeivk efmtprklfy dfq
//
LOCUS       XP_061015410             647 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            gamma isoform isoform X1 [Dama dama].
ACCESSION   XP_061015410
VERSION     XP_061015410.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159427.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..647
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..647
                     /product="serine/threonine-protein phosphatase 2A 56 kDa
                     regulatory subunit gamma isoform isoform X1"
                     /calculated_mol_wt=74077
     Region          34..>100
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); cl27532"
                     /db_xref="CDD:474937"
     Region          88..491
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); pfam01603"
                     /db_xref="CDD:460264"
     CDS             1..647
                     /gene="PPP2R5C"
                     /coded_by="XM_061159427.1:69..2012"
                     /db_xref="GeneID:133068246"
ORIGIN      
        1 mpnknkkeke spkpgksgks skegqdiids eipsrknsli aapsavstki kvpapqpivk
       61 kdkrqnssrf sasnnrelqk lpslkdvppa dqeklfiqkl rqccvlfdfv sdplsdlkwk
      121 evkraalsem veyithnrnv iteplypevv hmfavnmfrt lppssnptga efdpeedept
      181 leaawphlql vyefflrfle sadfqpniak kyidqkfvlq llelfdsedp rerdflkttl
      241 hriygkflgl rayirkqinn ifyrfiyete hhngiaelle ilgsiingfa lplkeehkif
      301 llkvllplhk vkslsvyhpq laycvvqfle kdstltepvv mallkywpkt hspkevmfln
      361 eleeildvie psefvkimep lfrqlakcvs sphfqvaera lyywnneyim slisdnaaki
      421 lpimfpslyr nskthwnkti hgliynalkl fmemnqklfd dctqqfkaek lkeklkmker
      481 eeawvkienl akanpqyavy sqastisvpv ametdgplfe dvqmlrktvn eearqlvmvk
      541 tkesgpsgdf defcpklsse svhsyraptl mlpphflnrl glsellsrcg qrpdlsgshl
      601 rggvqgsisv clvhptinsm ltstplhqgh ssrvtvcmts lscrpcf
//
LOCUS       XP_061015411             595 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            gamma isoform isoform X2 [Dama dama].
ACCESSION   XP_061015411
VERSION     XP_061015411.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159428.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..595
                     /product="serine/threonine-protein phosphatase 2A 56 kDa
                     regulatory subunit gamma isoform isoform X2"
                     /calculated_mol_wt=68450
     Region          34..>100
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); cl27532"
                     /db_xref="CDD:474937"
     Region          88..491
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); pfam01603"
                     /db_xref="CDD:460264"
     CDS             1..595
                     /gene="PPP2R5C"
                     /coded_by="XM_061159428.1:69..1856"
                     /db_xref="GeneID:133068246"
ORIGIN      
        1 mpnknkkeke spkpgksgks skegqdiids eipsrknsli aapsavstki kvpapqpivk
       61 kdkrqnssrf sasnnrelqk lpslkdvppa dqeklfiqkl rqccvlfdfv sdplsdlkwk
      121 evkraalsem veyithnrnv iteplypevv hmfavnmfrt lppssnptga efdpeedept
      181 leaawphlql vyefflrfle sadfqpniak kyidqkfvlq llelfdsedp rerdflkttl
      241 hriygkflgl rayirkqinn ifyrfiyete hhngiaelle ilgsiingfa lplkeehkif
      301 llkvllplhk vkslsvyhpq laycvvqfle kdstltepvv mallkywpkt hspkevmfln
      361 eleeildvie psefvkimep lfrqlakcvs sphfqvaera lyywnneyim slisdnaaki
      421 lpimfpslyr nskthwnkti hgliynalkl fmemnqklfd dctqqfkaek lkeklkmker
      481 eeawvkienl akanpqyavy sqastisvpv ametdgplfe dvqmlrktvn eearqtgsdv
      541 ttgthsgpsr phgptqqprg prdpwpsvan ntprglpgiv hrreprkpsy ialcy
//
LOCUS       XP_061015413             593 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            gamma isoform isoform X3 [Dama dama].
ACCESSION   XP_061015413
VERSION     XP_061015413.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159430.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..593
                     /product="serine/threonine-protein phosphatase 2A 56 kDa
                     regulatory subunit gamma isoform isoform X3"
                     /calculated_mol_wt=68079
     Region          34..437
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); pfam01603"
                     /db_xref="CDD:460264"
     CDS             1..593
                     /gene="PPP2R5C"
                     /coded_by="XM_061159430.1:115..1896"
                     /db_xref="GeneID:133068246"
ORIGIN      
        1 mltcnkagsr mvvdaansng pfqpvallhi rdvppadqek lfiqklrqcc vlfdfvsdpl
       61 sdlkwkevkr aalsemveyi thnrnvitep lypevvhmfa vnmfrtlpps snptgaefdp
      121 eedeptleaa wphlqlvyef flrflesadf qpniakkyid qkfvlqllel fdsedprerd
      181 flkttlhriy gkflglrayi rkqinnifyr fiyetehhng iaelleilgs iingfalplk
      241 eehkifllkv llplhkvksl svyhpqlayc vvqflekdst ltepvvmall kywpkthspk
      301 evmflnelee ildviepsef vkimeplfrq lakcvssphf qvaeralyyw nneyimslis
      361 dnaakilpim fpslyrnskt hwnktihgli ynalklfmem nqklfddctq qfkaeklkek
      421 lkmkereeaw vkienlakan pqyavysqas tisvpvamet dgplfedvqm lrktvneear
      481 qlvmvktkes gpsgdfdefc pklssesvhs yraptlmlpp hflnrlglse llsrcgqrpd
      541 lsgshlrggv qgsisvclvh ptinsmltst plhqghssrv tvcmtslscr pcf
//
LOCUS       XP_061015414             578 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            gamma isoform isoform X4 [Dama dama].
ACCESSION   XP_061015414
VERSION     XP_061015414.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159431.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..578
                     /product="serine/threonine-protein phosphatase 2A 56 kDa
                     regulatory subunit gamma isoform isoform X4"
                     /calculated_mol_wt=66781
     Region          34..>100
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); cl27532"
                     /db_xref="CDD:474937"
     Region          88..491
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); pfam01603"
                     /db_xref="CDD:460264"
     CDS             1..578
                     /gene="PPP2R5C"
                     /coded_by="XM_061159431.1:69..1805"
                     /db_xref="GeneID:133068246"
ORIGIN      
        1 mpnknkkeke spkpgksgks skegqdiids eipsrknsli aapsavstki kvpapqpivk
       61 kdkrqnssrf sasnnrelqk lpslkdvppa dqeklfiqkl rqccvlfdfv sdplsdlkwk
      121 evkraalsem veyithnrnv iteplypevv hmfavnmfrt lppssnptga efdpeedept
      181 leaawphlql vyefflrfle sadfqpniak kyidqkfvlq llelfdsedp rerdflkttl
      241 hriygkflgl rayirkqinn ifyrfiyete hhngiaelle ilgsiingfa lplkeehkif
      301 llkvllplhk vkslsvyhpq laycvvqfle kdstltepvv mallkywpkt hspkevmfln
      361 eleeildvie psefvkimep lfrqlakcvs sphfqvaera lyywnneyim slisdnaaki
      421 lpimfpslyr nskthwnkti hgliynalkl fmemnqklfd dctqqfkaek lkeklkmker
      481 eeawvkienl akanpqyavy sqastisvpv ametdgplfe dvqmlrktvn eearqaqkdp
      541 kkerplarrk selpqdlhak saleahgrte epapqdgr
//
LOCUS       XP_061015415             577 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            gamma isoform isoform X5 [Dama dama].
ACCESSION   XP_061015415
VERSION     XP_061015415.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159432.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..577
                     /product="serine/threonine-protein phosphatase 2A 56 kDa
                     regulatory subunit gamma isoform isoform X5"
                     /calculated_mol_wt=66638
     Region          34..>100
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); cl27532"
                     /db_xref="CDD:474937"
     Region          88..491
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); pfam01603"
                     /db_xref="CDD:460264"
     CDS             1..577
                     /gene="PPP2R5C"
                     /coded_by="XM_061159432.1:69..1802"
                     /db_xref="GeneID:133068246"
ORIGIN      
        1 mpnknkkeke spkpgksgks skegqdiids eipsrknsli aapsavstki kvpapqpivk
       61 kdkrqnssrf sasnnrelqk lpslkdvppa dqeklfiqkl rqccvlfdfv sdplsdlkwk
      121 evkraalsem veyithnrnv iteplypevv hmfavnmfrt lppssnptga efdpeedept
      181 leaawphlql vyefflrfle sadfqpniak kyidqkfvlq llelfdsedp rerdflkttl
      241 hriygkflgl rayirkqinn ifyrfiyete hhngiaelle ilgsiingfa lplkeehkif
      301 llkvllplhk vkslsvyhpq laycvvqfle kdstltepvv mallkywpkt hspkevmfln
      361 eleeildvie psefvkimep lfrqlakcvs sphfqvaera lyywnneyim slisdnaaki
      421 lpimfpslyr nskthwnkti hgliynalkl fmemnqklfd dctqqfkaek lkeklkmker
      481 eeawvkienl akanpqyavy sqastisvpv ametdgplfe dvqmlrktvn eearqdrtsl
      541 rahtqghpdr taphsnqear vtrgrlwptt hpgdsqa
//
LOCUS       XP_061015416             569 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            gamma isoform isoform X6 [Dama dama].
ACCESSION   XP_061015416
VERSION     XP_061015416.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159433.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..569
                     /product="serine/threonine-protein phosphatase 2A 56 kDa
                     regulatory subunit gamma isoform isoform X6"
                     /calculated_mol_wt=65570
     Region          10..413
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); pfam01603"
                     /db_xref="CDD:460264"
     CDS             1..569
                     /gene="PPP2R5C"
                     /coded_by="XM_061159433.1:105..1814"
                     /db_xref="GeneID:133068246"
ORIGIN      
        1 mqilgledvp padqeklfiq klrqccvlfd fvsdplsdlk wkevkraals emveyithnr
       61 nviteplype vvhmfavnmf rtlppssnpt gaefdpeede ptleaawphl qlvyefflrf
      121 lesadfqpni akkyidqkfv lqllelfdse dprerdflkt tlhriygkfl glrayirkqi
      181 nnifyrfiye tehhngiael leilgsiing falplkeehk ifllkvllpl hkvkslsvyh
      241 pqlaycvvqf lekdstltep vvmallkywp kthspkevmf lneleeildv iepsefvkim
      301 eplfrqlakc vssphfqvae ralyywnney imslisdnaa kilpimfpsl yrnskthwnk
      361 tihgliynal klfmemnqkl fddctqqfka eklkeklkmk ereeawvkie nlakanpqya
      421 vysqastisv pvametdgpl fedvqmlrkt vneearqlvm vktkesgpsg dfdefcpkls
      481 sesvhsyrap tlmlpphfln rlglsellsr cgqrpdlsgs hlrggvqgsi svclvhptin
      541 smltstplhq ghssrvtvcm tslscrpcf
//
LOCUS       XP_061015417             550 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            gamma isoform isoform X7 [Dama dama].
ACCESSION   XP_061015417
VERSION     XP_061015417.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159434.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..550
                     /product="serine/threonine-protein phosphatase 2A 56 kDa
                     regulatory subunit gamma isoform isoform X7"
                     /calculated_mol_wt=63584
     Region          34..>100
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); cl27532"
                     /db_xref="CDD:474937"
     Region          88..491
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); pfam01603"
                     /db_xref="CDD:460264"
     CDS             1..550
                     /gene="PPP2R5C"
                     /coded_by="XM_061159434.1:69..1721"
                     /db_xref="GeneID:133068246"
ORIGIN      
        1 mpnknkkeke spkpgksgks skegqdiids eipsrknsli aapsavstki kvpapqpivk
       61 kdkrqnssrf sasnnrelqk lpslkdvppa dqeklfiqkl rqccvlfdfv sdplsdlkwk
      121 evkraalsem veyithnrnv iteplypevv hmfavnmfrt lppssnptga efdpeedept
      181 leaawphlql vyefflrfle sadfqpniak kyidqkfvlq llelfdsedp rerdflkttl
      241 hriygkflgl rayirkqinn ifyrfiyete hhngiaelle ilgsiingfa lplkeehkif
      301 llkvllplhk vkslsvyhpq laycvvqfle kdstltepvv mallkywpkt hspkevmfln
      361 eleeildvie psefvkimep lfrqlakcvs sphfqvaera lyywnneyim slisdnaaki
      421 lpimfpslyr nskthwnkti hgliynalkl fmemnqklfd dctqqfkaek lkeklkmker
      481 eeawvkienl akanpqyavy sqastisvpv ametdgplfe dvqmlrktvn eearqsvgrk
      541 avssmqlrkv
//
LOCUS       XP_061015418             518 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            gamma isoform isoform X8 [Dama dama].
ACCESSION   XP_061015418
VERSION     XP_061015418.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159435.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..518
                     /product="serine/threonine-protein phosphatase 2A 56 kDa
                     regulatory subunit gamma isoform isoform X8"
                     /calculated_mol_wt=59696
     Region          1..362
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); pfam01603"
                     /db_xref="CDD:460264"
     CDS             1..518
                     /gene="PPP2R5C"
                     /coded_by="XM_061159435.1:591..2147"
                     /db_xref="GeneID:133068246"
ORIGIN      
        1 mveyithnrn viteplypev vhmfavnmfr tlppssnptg aefdpeedep tleaawphlq
       61 lvyefflrfl esadfqpnia kkyidqkfvl qllelfdsed prerdflktt lhriygkflg
      121 lrayirkqin nifyrfiyet ehhngiaell eilgsiingf alplkeehki fllkvllplh
      181 kvkslsvyhp qlaycvvqfl ekdstltepv vmallkywpk thspkevmfl neleeildvi
      241 epsefvkime plfrqlakcv ssphfqvaer alyywnneyi mslisdnaak ilpimfpsly
      301 rnskthwnkt ihgliynalk lfmemnqklf ddctqqfkae klkeklkmke reeawvkien
      361 lakanpqyav ysqastisvp vametdgplf edvqmlrktv neearqlvmv ktkesgpsgd
      421 fdefcpklss esvhsyrapt lmlpphflnr lglsellsrc gqrpdlsgsh lrggvqgsis
      481 vclvhptins mltstplhqg hssrvtvcmt slscrpcf
//
LOCUS       XP_061015419             539 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            gamma isoform isoform X9 [Dama dama].
ACCESSION   XP_061015419
VERSION     XP_061015419.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159436.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..539
                     /product="serine/threonine-protein phosphatase 2A 56 kDa
                     regulatory subunit gamma isoform isoform X9"
                     /calculated_mol_wt=62425
     Region          34..>100
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); cl27532"
                     /db_xref="CDD:474937"
     Region          88..491
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); pfam01603"
                     /db_xref="CDD:460264"
     CDS             1..539
                     /gene="PPP2R5C"
                     /coded_by="XM_061159436.1:69..1688"
                     /db_xref="GeneID:133068246"
ORIGIN      
        1 mpnknkkeke spkpgksgks skegqdiids eipsrknsli aapsavstki kvpapqpivk
       61 kdkrqnssrf sasnnrelqk lpslkdvppa dqeklfiqkl rqccvlfdfv sdplsdlkwk
      121 evkraalsem veyithnrnv iteplypevv hmfavnmfrt lppssnptga efdpeedept
      181 leaawphlql vyefflrfle sadfqpniak kyidqkfvlq llelfdsedp rerdflkttl
      241 hriygkflgl rayirkqinn ifyrfiyete hhngiaelle ilgsiingfa lplkeehkif
      301 llkvllplhk vkslsvyhpq laycvvqfle kdstltepvv mallkywpkt hspkevmfln
      361 eleeildvie psefvkimep lfrqlakcvs sphfqvaera lyywnneyim slisdnaaki
      421 lpimfpslyr nskthwnkti hgliynalkl fmemnqklfd dctqqfkaek lkeklkmker
      481 eeawvkienl akanpqaqkd pkkerplarr kselpqdlha ksaleahgrt eepapqdgr
//
LOCUS       XP_061015420             524 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            gamma isoform isoform X10 [Dama dama].
ACCESSION   XP_061015420
VERSION     XP_061015420.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159437.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..524
                     /product="serine/threonine-protein phosphatase 2A 56 kDa
                     regulatory subunit gamma isoform isoform X10"
                     /calculated_mol_wt=60784
     Region          34..437
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); pfam01603"
                     /db_xref="CDD:460264"
     CDS             1..524
                     /gene="PPP2R5C"
                     /coded_by="XM_061159437.1:113..1687"
                     /db_xref="GeneID:133068246"
ORIGIN      
        1 mltcnkagsr mvvdaansng pfqpvallhi rdvppadqek lfiqklrqcc vlfdfvsdpl
       61 sdlkwkevkr aalsemveyi thnrnvitep lypevvhmfa vnmfrtlpps snptgaefdp
      121 eedeptleaa wphlqlvyef flrflesadf qpniakkyid qkfvlqllel fdsedprerd
      181 flkttlhriy gkflglrayi rkqinnifyr fiyetehhng iaelleilgs iingfalplk
      241 eehkifllkv llplhkvksl svyhpqlayc vvqflekdst ltepvvmall kywpkthspk
      301 evmflnelee ildviepsef vkimeplfrq lakcvssphf qvaeralyyw nneyimslis
      361 dnaakilpim fpslyrnskt hwnktihgli ynalklfmem nqklfddctq qfkaeklkek
      421 lkmkereeaw vkienlakan pqyavysqas tisvpvamet dgplfedvqm lrktvneear
      481 qaqkdpkker plarrkselp qdlhaksale ahgrteepap qdgr
//
LOCUS       XP_061015421             518 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            gamma isoform isoform X8 [Dama dama].
ACCESSION   XP_061015421
VERSION     XP_061015421.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159438.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..518
                     /product="serine/threonine-protein phosphatase 2A 56 kDa
                     regulatory subunit gamma isoform isoform X8"
                     /calculated_mol_wt=59696
     Region          1..362
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); pfam01603"
                     /db_xref="CDD:460264"
     CDS             1..518
                     /gene="PPP2R5C"
                     /coded_by="XM_061159438.1:154..1710"
                     /db_xref="GeneID:133068246"
ORIGIN      
        1 mveyithnrn viteplypev vhmfavnmfr tlppssnptg aefdpeedep tleaawphlq
       61 lvyefflrfl esadfqpnia kkyidqkfvl qllelfdsed prerdflktt lhriygkflg
      121 lrayirkqin nifyrfiyet ehhngiaell eilgsiingf alplkeehki fllkvllplh
      181 kvkslsvyhp qlaycvvqfl ekdstltepv vmallkywpk thspkevmfl neleeildvi
      241 epsefvkime plfrqlakcv ssphfqvaer alyywnneyi mslisdnaak ilpimfpsly
      301 rnskthwnkt ihgliynalk lfmemnqklf ddctqqfkae klkeklkmke reeawvkien
      361 lakanpqyav ysqastisvp vametdgplf edvqmlrktv neearqlvmv ktkesgpsgd
      421 fdefcpklss esvhsyrapt lmlpphflnr lglsellsrc gqrpdlsgsh lrggvqgsis
      481 vclvhptins mltstplhqg hssrvtvcmt slscrpcf
//
LOCUS       XP_061015422             485 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            gamma isoform isoform X11 [Dama dama].
ACCESSION   XP_061015422
VERSION     XP_061015422.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159439.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..485
                     /product="serine/threonine-protein phosphatase 2A 56 kDa
                     regulatory subunit gamma isoform isoform X11"
                     /calculated_mol_wt=56427
     Region          34..437
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); pfam01603"
                     /db_xref="CDD:460264"
     CDS             1..485
                     /gene="PPP2R5C"
                     /coded_by="XM_061159439.1:112..1569"
                     /db_xref="GeneID:133068246"
ORIGIN      
        1 mltcnkagsr mvvdaansng pfqpvallhi rdvppadqek lfiqklrqcc vlfdfvsdpl
       61 sdlkwkevkr aalsemveyi thnrnvitep lypevvhmfa vnmfrtlpps snptgaefdp
      121 eedeptleaa wphlqlvyef flrflesadf qpniakkyid qkfvlqllel fdsedprerd
      181 flkttlhriy gkflglrayi rkqinnifyr fiyetehhng iaelleilgs iingfalplk
      241 eehkifllkv llplhkvksl svyhpqlayc vvqflekdst ltepvvmall kywpkthspk
      301 evmflnelee ildviepsef vkimeplfrq lakcvssphf qvaeralyyw nneyimslis
      361 dnaakilpim fpslyrnskt hwnktihgli ynalklfmem nqklfddctq qfkaeklkek
      421 lkmkereeaw vkienlakan pqaqkdpkke rplarrksel pqdlhaksal eahgrteepa
      481 pqdgr
//
LOCUS       XP_061015423            4645 aa            linear   MAM 02-DEC-2023
DEFINITION  cytoplasmic dynein 1 heavy chain 1 [Dama dama].
ACCESSION   XP_061015423
VERSION     XP_061015423.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159440.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4645
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..4645
                     /product="cytoplasmic dynein 1 heavy chain 1"
                     /calculated_mol_wt=532040
     Region          241..831
                     /region_name="DHC_N1"
                     /note="Dynein heavy chain, N-terminal region 1; pfam08385"
                     /db_xref="CDD:462457"
     Region          1045..4327
                     /region_name="DYN1"
                     /note="Dynein, heavy chain [Cytoskeleton]; COG5245"
                     /db_xref="CDD:227570"
     Region          4332..4643
                     /region_name="Dynein_C"
                     /note="Dynein heavy chain C-terminal domain; pfam18199"
                     /db_xref="CDD:465677"
     CDS             1..4645
                     /gene="DYNC1H1"
                     /coded_by="XM_061159440.1:16..13953"
                     /db_xref="GeneID:133068249"
ORIGIN      
        1 msesgggged gsaglevsav qnvadvsvlq khlrklvpll ledggeapaa leaaleeksa
       61 leqmrkflsd pqvhtvlver stlkedvgde geeekefisy ninidihygv ksnslafikr
      121 tpvidadkpv ssqlrvltls edspyetlhs fisnavapff ksyiresgka drdgdkmaps
      181 vekkiaelem gllhlqqnie ipeislpihp iitnvakqcy ergekpkvtd fgdkvedptf
      241 lnqlqsgvnr wireiqkvtk ldrdpasgta lqeisfwlnl eralyriqek respevlltl
      301 dilkhgkrfh atvsfdtdtg lkqaletvnd ynplmkdfpl ndllsateld kirqalvaif
      361 thlrkirntk ypiqralrlv eaisrdlssq llkvlgtrkl mhvayeefek vmvacfevfq
      421 twddeyeklq vllrdivkrk reenlkmvwr inpahrklqa rldqmrkfrr qheqlraviv
      481 rvlrpqvtav aqqnqgevpe pqdmkvaevl fdaadanaie evnlayenvk evdgldvske
      541 gteaweaamk ryderidrve tritarlrdq lgtaknanem frifsrfnal fvrphirgai
      601 reyqtqliqr vkddieslhd kfkvqypqsq ackmshvrdl ppvsgsiiwa kqidrqltay
      661 mkrvedvlgk gwenhvegqk lkqdgdsfrm klntqeifdd warkvqqrnl gvsgriftie
      721 strvrgragn vlklkvnflp eiitlskevr nlkwlgfrvp laivnkahqa nqlypfaisl
      781 iesvrtyert cekveernti sllvaglkke vqaliaegia lvwesykldp yvqrlaetvf
      841 sfqekvddll iieekidlev rsletcmydh ktfseilnrv qkavddlnlh sysnlpiwvn
      901 kldmeieril gvrlqaglra wtqvllgqae dkaevdmdtd apqvshkpgg epkiknvvhe
      961 lritnqviyl nppieecryk lyqemfawkm vvlslpriqs qryqvgvhye lteeekfyrn
     1021 altrmpdgpv aleesysavm givteveqyv kvwlqyqclw dmqaeniynr lgedlnkwqa
     1081 llvqirkarg tfdnaetkke fgpvvidygk vqskvnlkyd swhkevlskf gqmlgsnmte
     1141 fhsqisksrq eleqhsvdta stsdavtfit yvqslkrkik qfekqvelyr ngqrllekqr
     1201 fqfppswlyi dniegewgaf ndimrrkdsa iqqqvanlqm kivqedrave srttdlltdw
     1261 ektkpvtgnl rpeealqalt iyegkfgrlk ddrekcakak ealeltdtgl lsgseervqv
     1321 aleelqdlkg vwselskvwe qidqmkeqpw vsvqprklrq nldgllnqlk nfparlrqya
     1381 syefvqrllk gylkinmlvi elksealkdr hwkqlmkrlh vnwvvseltl gqiwdvdlqk
     1441 neavvkdvll vaqgemalee flkqirevwn tyeldlvnyq nkcrlirgwd dlfnkvkehi
     1501 nsvsamklsp yykvfeedal swedklnrim alfdvwidvq rrwvylegif tgsadikhll
     1561 pvetqrfqsi steflalmkk vsksplvmdv lniqgvqrsl erladllgki qkalgeyler
     1621 erssfprfyf vgdedlleii gnsknvaklq khfkkmfagv ssiilnedns vvlgissreg
     1681 eevmfktpvs itehpkinew ltlvekemrv tlakllaesv teveifgkat sidpntyitw
     1741 idkyqaqlvv lsaqiawsen vetalssmgg sgdaaplhsv lsnvevtlnv ladsvlmeqp
     1801 plrrrklehl itelvhqrdv trslikskvd naksfewlsq mrfyfdpkqt dvlqqlsiqm
     1861 anakfnygfe ylgvqdklvq tpltdrcylt mtqalearlg gspfgpagtg ktesvkalgh
     1921 qlgrfvlvfn cdetfdfqam grifvglcqv gawgcfdefn rleermlsav sqqvqciqea
     1981 lrehsnpnld ktsapitcel lnkqvkvspd maifitmnpg yagrsnlpdn lkklfrslam
     2041 tkpdrqliaq vmlysqgfrt aevlankivp ffklcdeqls sqshydfglr alksvlvsag
     2101 nvkreriqki krekeergea vdegeiaenl peqeiliqsv cetmvpklva edipllfsll
     2161 sdvfpgvqyh rgemtalree lkkvcqemyl tygdgeevgg mwvekvlqly qitqinhglm
     2221 mvgpsgsgks mawrvllkal erlegvegva hiidpkaisk dhlygtldpn trewtdglft
     2281 hvlrkiidnv rgelqkrqwi vfdgdvdpew venlnsvldd nklltlpnge rlslppnvri
     2341 mfevqdlkya tlatvsrcgm vwfsedvlst dmifnnflar lrsipldege deaqrrrkgk
     2401 edegeeaasp mlqiqrdaat imqpyftsng lvtkalehaf klehimdltr lrclgalfsm
     2461 lhqacrnvaq ynanhpdfpm qieqleryiq rylvyailws lsgdsrlkmr aelgeyirri
     2521 ttvplptapn ipiidyevsi sgewspwqak vpqievethk vaapdvvvpt ldtvrheall
     2581 ytwlaehkpl vlcgppgsgk tmtlfsalra lpdmevvgln fssattpell lktfdhycey
     2641 rrtpngvvla pvqlgkwlvl fcdeinlpdm dkygtqrvis firqmvehgg fyrtsdqtwv
     2701 kleriqfvga cnpptdpgrk plshrflrhv pvvyvdypgp asltqiygtf nramlrlips
     2761 lrtyaeplta amvefytmsq erftqdtqph yiyspremtr wvrgifealr pletlpvegl
     2821 iriwahealr lfqdrlvede errwtdenid mvalkhfpni dkekamsrpi lysnwlskdy
     2881 ipvdqeelrd yvkarlkvfy eeeldvplvl fnevldhvlr idrifrqpqg hllligvsga
     2941 gkttlsrfva wmnglsvyqi kvhrkytged fdedlrtvlr rsgcknekia fimdesnvld
     3001 sgflermntl langevpglf egdeyatlmt qckegaqkeg lmldsheely kwftsqvirn
     3061 lhvvftmnps seglkdraat spalfnrcvl nwfgdwstea lyqvgkefts kmdlekpnyv
     3121 vpdympvvyd klpqppshre aivnscvfvh qtlhqanarl akrggrtmai tprhyldfin
     3181 hyanlfhekr seleeqqmhl nvglrkiket vdqveelrrd lriksqelev knaaandklk
     3241 kmvkdqqeae kkkvmsqdiq eqlhkqqevi adkqmsvked ldkvepavie aqnavksikk
     3301 qhlvevrsma nppaavklal esiclllges ttdwkqirsi imrenfipti vnfsaeeisd
     3361 airekmkkny msnpsynyei vnraslacgp mvkwaiaqln yadmlkrvep lrnelqkled
     3421 dakdnqqkan eveqmirdle asiarykeey avliseaqai kadlaaveak vnrstallks
     3481 lsaererwek tsetfknqms tiagdcllsa afiayagyfd qqmrqnlftt wshhlqqani
     3541 qfrtdiarte ylsnaderlr wqasslpadd lctenaimlk rfnrypliid psgqatefim
     3601 neykdrkitr tsflddafrk nlesalrfgn pllvqdvesy dpvlnpvlnr evrrtggrvl
     3661 itlgdqdidl spsfviflst rdptvefppd lcsrvtfvnf tvtrsslqsq clnevlkaer
     3721 pdvdekrsdl lklqgefqlr lrqleksllq alnevkgril dddtiittle nlkreaaevt
     3781 rkveetdivm qevetvsqqy lplstacssi yftmeslkqi hflyqyslqf fldiyhnvly
     3841 enpnlkgvtd htqrlsiitk dlfqvafnrv argmlhqdhi tfamllarik lkgtvgepty
     3901 daefqhflrg keivlsagst pkiqgltgeq aeavvrlscl pafkdliakv qadeqfgiwl
     3961 dssspeqtvp ylwseenpat pigqaihrll liqafrpdrl lamahmfvst nlgesfmsim
     4021 eqpldlthiv dtevkpntpv lmcsvpgyda sghvedlaae qntqitsiai gsaegfnqad
     4081 kaintavksg rwvmlknvhl apgwlmqlek klhslqphac frlfltmein pkvpvnllra
     4141 grifvfeppp gvkanmlrtf ssipvsrick spnerarlyf llawfhaiiq erlryaplgw
     4201 skkyefgesd lrsacdtvdt wlddtakgrq nispdkipws alktlmaqsi yggrvdnefd
     4261 qrllntfler lfttrsfdse fklackvdgh kdiqmpdgir reefvqwvel lpdtqtpswl
     4321 glpnnaekvl lttqgvdmis kmlkmqmled eddlayaete kkarpdsssd grpawmrtlh
     4381 ttasnwlqli pqtlshlkrt venikdplfr fferevkmga kllqdvrqdl advvqvcegr
     4441 kkqtnylrtl inelvkgilp rswshytvpa gmtviqwvsd fservkqlqn isqaaasgga
     4501 kelknihvcl gglfvpeayi tatrqyvaqa nswsleelcl evnvttsqsa tldacsfgvt
     4561 glklqgatcg nnklslsnai stvlpltqlr wvkqtnaekk anvvtlpvyl nftradlift
     4621 vdfeiatked prsfyergva vlcte
//
LOCUS       XP_061015424             733 aa            linear   MAM 02-DEC-2023
DEFINITION  heat shock protein HSP 90-alpha [Dama dama].
ACCESSION   XP_061015424
VERSION     XP_061015424.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159441.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..733
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..733
                     /product="heat shock protein HSP 90-alpha"
                     /calculated_mol_wt=84600
     Region          18..733
                     /region_name="HSP90"
                     /note="Hsp90 protein; cl46693"
                     /db_xref="CDD:481033"
     CDS             1..733
                     /gene="HSP90AA1"
                     /coded_by="XM_061159441.1:159..2360"
                     /db_xref="GeneID:133068250"
ORIGIN      
        1 mpeetqaqdq pmeeeevetf afqaeiaqlm sliintfysn keiflrelis nssdaldkir
       61 yesltdpskl dsgkelhinl ipnkqdrtlt ivdtgigmtk adlinnlgti aksgtkafme
      121 alqagadism igqfgvgfys aylvaekvtv itkhnddeqy awessaggsf tvrtdtgepm
      181 grgtkvilhl kedqteylee rrikeivkkh sqfigypitl fvekerdkev sddeaeeked
      241 keeekekeek esddkpeied vgsdeeeeek kdgdkkkkkk ikekyidqee lnktkpiwtr
      301 npdditneey gefyksltnd wedhlavkhf svegqlefra llfvprrapf dlfenrkkkn
      361 niklyvrrvf imdnceelip eylnfirgvv dsedlplnis remlqqskil kvirknlvkk
      421 clelftelae dkenykkfye qfskniklgi hedsqnrkkl sellryytsa sgdemvslkd
      481 yctrmkenqk hiyyitgetk dqvansafve rlrkhglevi ymiepideyc vqqlkefegk
      541 tlvsvtkegl elpedeeekk kqeekktkfe nlckimkdil ekkvekvvvs nrlvtspcci
      601 vtstygwtan merimkaqal rdnstmgyma akkhleinpd hsiietlrqk aeadkndksv
      661 kdlvillyet allssgfsle dpqthanriy rmiklglgid eddptaddss aavteemppl
      721 egdddtsrme evd
//
LOCUS       XP_061015425             695 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 20 isoform X1 [Dama dama].
ACCESSION   XP_061015425
VERSION     XP_061015425.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159442.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..695
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..695
                     /product="WD repeat-containing protein 20 isoform X1"
                     /calculated_mol_wt=76005
     Region          102..143
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          149..>388
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          153..218
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <208..314
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          223..259
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          266..299
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          307..353
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..695
                     /gene="WDR20"
                     /coded_by="XM_061159442.1:56..2143"
                     /db_xref="GeneID:133068251"
ORIGIN      
        1 mategggkem neiktqfttr eglykllphs eysrpnrvpf nsqgsnpvrv sfvnlndqsg
       61 ngdrlcfnvg relyfyiykg vrkaadlskp idkriykgtq ptchdfnhlt ataesvsllv
      121 gfsagqvqli dpvkketskl fneerlidks rvtcvkwvpg seslflvahs sgnmylynve
      181 htcgttaphy qllkqgesfa vhtckskstr npllkwtvge galnefafsp dgkflacvsq
      241 dgflrvfnfd svelhgtmks yfggllcvcw spdgkyivtg geddlvtvws fgdcrviarg
      301 hghkswvsvv afdpyttsve esdpmefsgs dedfqdllhf grdranstqs rlskrnstes
      361 rpvsvtyrfg svgqdtqlcl wdltedilfp hqplsrarth tnvmnatspp agsagnsvpt
      421 lgsaappplp rsnslphaav ssagskgsva dgaiaagvsk fatlslhdrk drhhekdhkr
      481 nhsmghissk ssdklnlvtk srtdpaktlg tplcprmedv plleplvckk iaherltvli
      541 fledcivtac qegfictwgr pgkvvflvfc dlplsrvprg egrrltavsw wpvsadarrp
      601 pgrlepqvaa grlpppslew fggalsaplg pprppvqrel ceraarkgrp lilrtgtsvs
      661 gsfsarirgl dlhvppgarg glptqlslpa vswdi
//
LOCUS       XP_061015427             634 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 20 isoform X2 [Dama dama].
ACCESSION   XP_061015427
VERSION     XP_061015427.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159444.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..634
                     /product="WD repeat-containing protein 20 isoform X2"
                     /calculated_mol_wt=69334
     Region          88..>327
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          92..157
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <147..253
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          162..198
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          205..238
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          246..292
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..634
                     /gene="WDR20"
                     /coded_by="XM_061159444.1:57..1961"
                     /db_xref="GeneID:133068251"
ORIGIN      
        1 mategggkem neiktqfttr eglykllphs eysrpnrvpf nsqgsnpvrv sfvnlndqsg
       61 ngdrlcfnvg relyfyiykg vrkrlidksr vtcvkwvpgs eslflvahss gnmylynveh
      121 tcgttaphyq llkqgesfav htckskstrn pllkwtvgeg alnefafspd gkflacvsqd
      181 gflrvfnfds velhgtmksy fggllcvcws pdgkyivtgg eddlvtvwsf gdcrviargh
      241 ghkswvsvva fdpyttsvee sdpmefsgsd edfqdllhfg rdranstqsr lskrnstesr
      301 pvsvtyrfgs vgqdtqlclw dltedilfph qplsrartht nvmnatsppa gsagnsvptl
      361 gsaappplpr snslphaavs sagskgsvad gaiaagvskf atlslhdrkd rhhekdhkrn
      421 hsmghissks sdklnlvtks rtdpaktlgt plcprmedvp lleplvckki aherltvlif
      481 ledcivtacq egfictwgrp gkvvflvfcd lplsrvprge grrltavsww pvsadarrpp
      541 grlepqvaag rlpppslewf ggalsaplgp prppvqrelc eraarkgrpl ilrtgtsvsg
      601 sfsarirgld lhvppgargg lptqlslpav swdi
//
LOCUS       XP_061015428             581 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 20 isoform X3 [Dama dama].
ACCESSION   XP_061015428
VERSION     XP_061015428.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159445.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..581
                     /product="WD repeat-containing protein 20 isoform X3"
                     /calculated_mol_wt=63491
     Region          102..143
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          149..>388
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          153..218
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <208..314
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          223..259
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          266..299
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          307..353
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..581
                     /gene="WDR20"
                     /coded_by="XM_061159445.1:54..1799"
                     /db_xref="GeneID:133068251"
ORIGIN      
        1 mategggkem neiktqfttr eglykllphs eysrpnrvpf nsqgsnpvrv sfvnlndqsg
       61 ngdrlcfnvg relyfyiykg vrkaadlskp idkriykgtq ptchdfnhlt ataesvsllv
      121 gfsagqvqli dpvkketskl fneerlidks rvtcvkwvpg seslflvahs sgnmylynve
      181 htcgttaphy qllkqgesfa vhtckskstr npllkwtvge galnefafsp dgkflacvsq
      241 dgflrvfnfd svelhgtmks yfggllcvcw spdgkyivtg geddlvtvws fgdcrviarg
      301 hghkswvsvv afdpyttsve esdpmefsgs dedfqdllhf grdranstqs rlskrnstes
      361 rpvsvtyrfg svgqdtqlcl wdltedilfp hqplsrarth tnvmnatspp agsagnsvpt
      421 lgsaappplp rsnslphaav ssagskgsva dgaiaagvsk fatlslhdrk drhhekdhkr
      481 nhsmghissk ssdklnlvtk srtdpaktlg tplcprmedv plleplvckk iaherltvli
      541 fledcivtac qegfictwgr pgkvgllsap nqatspggtv v
//
LOCUS       XP_061015429             522 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 20 isoform X4 [Dama dama].
ACCESSION   XP_061015429
VERSION     XP_061015429.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159446.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..522
                     /product="WD repeat-containing protein 20 isoform X4"
                     /calculated_mol_wt=56675
     Region          <35..141
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          50..86
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          93..126
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          134..180
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..522
                     /gene="WDR20"
                     /coded_by="XM_061159446.1:378..1946"
                     /db_xref="GeneID:133068251"
ORIGIN      
        1 mylynvehtc gttaphyqll kqgesfavht ckskstrnpl lkwtvgegal nefafspdgk
       61 flacvsqdgf lrvfnfdsve lhgtmksyfg gllcvcwspd gkyivtgged dlvtvwsfgd
      121 crviarghgh kswvsvvafd pyttsveesd pmefsgsded fqdllhfgrd ranstqsrls
      181 krnstesrpv svtyrfgsvg qdtqlclwdl tedilfphqp lsrarthtnv mnatsppags
      241 agnsvptlgs aappplprsn slphaavssa gskgsvadga iaagvskfat lslhdrkdrh
      301 hekdhkrnhs mghisskssd klnlvtksrt dpaktlgtpl cprmedvpll eplvckkiah
      361 erltvlifle dcivtacqeg fictwgrpgk vvflvfcdlp lsrvprgegr rltavswwpv
      421 sadarrppgr lepqvaagrl pppslewfgg alsaplgppr ppvqrelcer aarkgrplil
      481 rtgtsvsgsf sarirgldlh vppgargglp tqlslpavsw di
//
LOCUS       XP_061015430             522 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 20 isoform X4 [Dama dama].
ACCESSION   XP_061015430
VERSION     XP_061015430.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159447.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..522
                     /product="WD repeat-containing protein 20 isoform X4"
                     /calculated_mol_wt=56675
     Region          <35..141
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          50..86
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          93..126
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          134..180
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..522
                     /gene="WDR20"
                     /coded_by="XM_061159447.1:188..1756"
                     /db_xref="GeneID:133068251"
ORIGIN      
        1 mylynvehtc gttaphyqll kqgesfavht ckskstrnpl lkwtvgegal nefafspdgk
       61 flacvsqdgf lrvfnfdsve lhgtmksyfg gllcvcwspd gkyivtgged dlvtvwsfgd
      121 crviarghgh kswvsvvafd pyttsveesd pmefsgsded fqdllhfgrd ranstqsrls
      181 krnstesrpv svtyrfgsvg qdtqlclwdl tedilfphqp lsrarthtnv mnatsppags
      241 agnsvptlgs aappplprsn slphaavssa gskgsvadga iaagvskfat lslhdrkdrh
      301 hekdhkrnhs mghisskssd klnlvtksrt dpaktlgtpl cprmedvpll eplvckkiah
      361 erltvlifle dcivtacqeg fictwgrpgk vvflvfcdlp lsrvprgegr rltavswwpv
      421 sadarrppgr lepqvaagrl pppslewfgg alsaplgppr ppvqrelcer aarkgrplil
      481 rtgtsvsgsf sarirgldlh vppgargglp tqlslpavsw di
//
LOCUS       XP_061015431             520 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 20 isoform X5 [Dama dama].
ACCESSION   XP_061015431
VERSION     XP_061015431.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159448.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..520
                     /product="WD repeat-containing protein 20 isoform X5"
                     /calculated_mol_wt=56820
     Region          88..>327
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          92..157
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <147..253
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          162..198
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          205..238
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          246..292
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..520
                     /gene="WDR20"
                     /coded_by="XM_061159448.1:56..1618"
                     /db_xref="GeneID:133068251"
ORIGIN      
        1 mategggkem neiktqfttr eglykllphs eysrpnrvpf nsqgsnpvrv sfvnlndqsg
       61 ngdrlcfnvg relyfyiykg vrkrlidksr vtcvkwvpgs eslflvahss gnmylynveh
      121 tcgttaphyq llkqgesfav htckskstrn pllkwtvgeg alnefafspd gkflacvsqd
      181 gflrvfnfds velhgtmksy fggllcvcws pdgkyivtgg eddlvtvwsf gdcrviargh
      241 ghkswvsvva fdpyttsvee sdpmefsgsd edfqdllhfg rdranstqsr lskrnstesr
      301 pvsvtyrfgs vgqdtqlclw dltedilfph qplsrartht nvmnatsppa gsagnsvptl
      361 gsaappplpr snslphaavs sagskgsvad gaiaagvskf atlslhdrkd rhhekdhkrn
      421 hsmghissks sdklnlvtks rtdpaktlgt plcprmedvp lleplvckki aherltvlif
      481 ledcivtacq egfictwgrp gkvgllsapn qatspggtvv
//
LOCUS       XP_061015432             177 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 20 isoform X6 [Dama dama].
ACCESSION   XP_061015432
VERSION     XP_061015432.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159449.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..177
                     /product="WD repeat-containing protein 20 isoform X6"
                     /calculated_mol_wt=19736
     CDS             1..177
                     /gene="WDR20"
                     /coded_by="XM_061159449.1:51..584"
                     /db_xref="GeneID:133068251"
ORIGIN      
        1 mategggkem neiktqfttr eglykllphs eysrpnrvpf nsqgsnpvrv sfvnlndqsg
       61 ngdrlcfnvg relyfyiykg vrkaadlskp idkriykgtq ptchdfnhlt ataesvsllv
      121 gfsagqvqli dpvkketskl fneenscqhl gkvdwnedsk tseealvavq masswrv
//
LOCUS       XP_061015433             161 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 20 isoform X7 [Dama dama].
ACCESSION   XP_061015433
VERSION     XP_061015433.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159450.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..161
                     /product="WD repeat-containing protein 20 isoform X7"
                     /calculated_mol_wt=17599
     CDS             1..161
                     /gene="WDR20"
                     /coded_by="XM_061159450.1:50..535"
                     /db_xref="GeneID:133068251"
ORIGIN      
        1 mategggkem neiktqfttr eglykllphs eysrpnrvpf nsqgsnpvrv sfvnlndqsg
       61 ngdrlcfnvg relyfyiykg vrkaadlskp idkriykgtq ptchdfnhlt ataesvsllv
      121 gfsagqvqli dpvkketskl fneegllsap nqatspggtv v
//
LOCUS       XP_061015434             151 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 20 isoform X8 [Dama dama].
ACCESSION   XP_061015434
VERSION     XP_061015434.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159451.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..151
                     /product="WD repeat-containing protein 20 isoform X8"
                     /calculated_mol_wt=16866
     CDS             1..151
                     /gene="WDR20"
                     /coded_by="XM_061159451.1:49..504"
                     /db_xref="GeneID:133068251"
ORIGIN      
        1 mategggkem neiktqfttr eglykllphs eysrpnrvpf nsqgsnpvrv sfvnlndqsg
       61 ngdrlcfnvg relyfyiykg vrkaadlskp idkriykgtq ptchdfnhlt ataesvsllv
      121 gfsagqvqli dpvkketskl fneemasswr v
//
LOCUS       XP_061015435             100 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 20 isoform X9 [Dama dama].
ACCESSION   XP_061015435
VERSION     XP_061015435.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159452.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..100
                     /product="WD repeat-containing protein 20 isoform X9"
                     /calculated_mol_wt=10928
     CDS             1..100
                     /gene="WDR20"
                     /coded_by="XM_061159452.1:54..356"
                     /db_xref="GeneID:133068251"
ORIGIN      
        1 mategggkem neiktqfttr eglykllphs eysrpnrvpf nsqgsnpvrv sfvnlndqsg
       61 ngdrlcfnvg relyfyiykg vrkgllsapn qatspggtvv
//
LOCUS       XP_061015436              90 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 20 isoform X10 [Dama dama].
ACCESSION   XP_061015436
VERSION     XP_061015436.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159453.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..90
                     /product="WD repeat-containing protein 20 isoform X10"
                     /calculated_mol_wt=10196
     CDS             1..90
                     /gene="WDR20"
                     /coded_by="XM_061159453.1:53..325"
                     /db_xref="GeneID:133068251"
ORIGIN      
        1 mategggkem neiktqfttr eglykllphs eysrpnrvpf nsqgsnpvrv sfvnlndqsg
       61 ngdrlcfnvg relyfyiykg vrkmasswrv
//
LOCUS       XP_061015437             607 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 20 isoform X11 [Dama dama].
ACCESSION   XP_061015437
VERSION     XP_061015437.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159454.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..607
                     /product="WD repeat-containing protein 20 isoform X11"
                     /calculated_mol_wt=66361
     Region          175..>414
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          179..244
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <234..340
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          249..285
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          292..325
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          333..379
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..607
                     /gene="WDR20"
                     /coded_by="XM_061159454.1:55..1878"
                     /db_xref="GeneID:133068251"
ORIGIN      
        1 mategggkem neiktqfttr eglykllphs eysrpnrvpf nsqgsnpvrv sfvnlndqsg
       61 ngdrlcfnvg relyfyiykg vrkaadlskp idkriykgtq ptchdfnhlt ataesvsllv
      121 gfsagqvqli dpvkketskl fneenscqhl gkvdwnedsk tseealvavq rlidksrvtc
      181 vkwvpgsesl flvahssgnm ylynvehtcg ttaphyqllk qgesfavhtc kskstrnpll
      241 kwtvgegaln efafspdgkf lacvsqdgfl rvfnfdsvel hgtmksyfgg llcvcwspdg
      301 kyivtggedd lvtvwsfgdc rviarghghk swvsvvafdp yttsveesdp mefsgsdedf
      361 qdllhfgrdr anstqsrlsk rnstesrpvs vtyrfgsvgq dtqlclwdlt edilfphqpl
      421 srarthtnvm natsppagsa gnsvptlgsa appplprsns lphaavssag skgsvadgai
      481 aagvskfatl slhdrkdrhh ekdhkrnhsm ghisskssdk lnlvtksrtd paktlgtplc
      541 prmedvplle plvckkiahe rltvlifled civtacqegf ictwgrpgkv gllsapnqat
      601 spggtvv
//
LOCUS       XP_061015438             683 aa            linear   MAM 02-DEC-2023
DEFINITION  protein SPT2 homolog [Dama dama].
ACCESSION   XP_061015438
VERSION     XP_061015438.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159455.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..683
                     /product="protein SPT2 homolog"
                     /calculated_mol_wt=75134
     Region          <31..>121
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          216..>531
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          602..665
                     /region_name="SPT2"
                     /note="SPT2 chromatin protein; pfam08243"
                     /db_xref="CDD:462407"
     CDS             1..683
                     /gene="LOC133068253"
                     /coded_by="XM_061159455.1:3068..5119"
                     /db_xref="GeneID:133068253"
ORIGIN      
        1 mdfreillia skaqgvnnvp kryslavgpp kkdpkvkgvq saavqaflrr keeelrrkal
       61 eekrrkeelv kkqielkhdk karamakrtk dnfhgyngip veekskkrqa mqsharqgad
      121 qeyeveeede fleynqaese qeyeeeqepp kveskpkvpl ksappvmnfs dllrlaekkq
      181 yepveikvvk kteerpltae elrerefler krrkktpetd arppptrrvp sqkesvgtkl
      241 srgsgdmhpa skgtvlphpe krprpstade krlhlslsks vpgertkvap gscsqpslhe
      301 grdrpvfnga gkphpstysp svpktsakgp qksapehkak kspphpshsr pgpmatphnk
      361 akslgvrppg sssspapgrp stgtarptvs pgpvpkrqng ssnsgpgrsv sgnrkpasdf
      421 sppgrtvsgt sglgrpasss ggpgrpvsgs ggsgrpmgss ggpgrpvssp helrrlvsgs
      481 gppgrlvsgp grsisgpapa grpvsssgpg rpvsslgpgr tvntsgpplk pkctvvseti
      541 sskniisrps ngqmngmkps lsgyrsahgp qrlpfpsgyk rqreyeeeed ddeeydseme
      601 dfiedegepq eeiskhirei fgydrkkykd esdyalryme sswkeqqkee akslrlgmqe
      661 dleemrreee emrrrkakkl kkr
//
LOCUS       XP_061015439             889 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: zinc finger protein 839 [Dama dama].
ACCESSION   XP_061015439
VERSION     XP_061015439.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159456.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts          :: corrected 1 indel
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..889
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..889
                     /product="LOW QUALITY PROTEIN: zinc finger protein 839"
                     /calculated_mol_wt=93455
     Region          125..869
                     /region_name="DUF4764"
                     /note="Domain of unknown function (DUF4764); pfam15961"
                     /db_xref="CDD:464955"
     CDS             1..889
                     /gene="ZNF839"
                     /coded_by="XM_061159456.1:51..2720"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon;
                     substituted 1 base at 1 genomic stop codon"
                     /db_xref="GeneID:133068254"
ORIGIN      
        1 madaepeaed gcedgcrggr apfsqrgsaa rvaplgpeql rrvleqvtka qppaeppppp
       61 ppcvldaarr lrdaaqqaal qrgpgaeppr pprllppqql eaicikvrsg emkgqekpmp
      121 alaaiqpksa rpgpppsgrc savglrsqll gtpprvlshp ppppahvfiq rplpalrpvp
      181 vktvlaaepl sgqstaavpp sasdlpaits vssssanlfi sssqtkhaek lkkslkvktr
      241 sgrisrppky kakdykfikt edladghpsd sddyaelsve ededqrgrqa lfdlascslr
      301 pktfkcqtce ksyigkggla rhfklhpghg qlepeaspsg kanrsviagp megetsslas
      361 rgppmpalpv eegavparrg rqngqsveve ealvsepkng sfsallgser hpgprrsgys
      421 vvpaepsmav lewsgaahpp ggagaarsra rlqeflhqcd rddlvelalp qlaqvvtvye
      481 fllmkvekgh lakplfpavy kefeelhkmv kkmcqdylhs sgpcseeple vnnskvaesl
      541 giteeflrkk evhadcipct ctspeeapee leevgpqkra teiaedglas vkrtrrdavp
      601 qdpaecpadd gglqrpapca paagagfapg vnggtsphpe espvtpapec essvaqagrr
      661 paalagwaah sgpadptapr qgalgrgspv pxghrghgps trwqrspgrv srrwgwpgep
      721 sslqhlslqp gnaeagsfre acgshlsspe snpseaqppe apahlprkaw smdavpadca
      781 hgttsepgpq psqgrcrvrr gpcrppgagg raavgeavaf alsdgcptls sqeeeqtvvq
      841 txdglllfhl gsvvpgegdv vtvtdvegpa lqlgpwngss gsletqpsq
//
LOCUS       XP_061015441             233 aa            linear   MAM 02-DEC-2023
DEFINITION  cyclin-dependent kinase 2-interacting protein isoform X1 [Dama
            dama].
ACCESSION   XP_061015441
VERSION     XP_061015441.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159458.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..233
                     /product="cyclin-dependent kinase 2-interacting protein
                     isoform X1"
                     /calculated_mol_wt=26372
     CDS             1..233
                     /gene="CINP"
                     /coded_by="XM_061159458.1:455..1156"
                     /db_xref="GeneID:133068255"
ORIGIN      
        1 mccvmgqtdd dshvllarke pllgktlgtv tprkpvlsvs arkikdnaad whnlilkwet
       61 lndggfatas nianmkisll srdkieless glaaddpaek ehaeysrele alceelqttl
      121 dgltkiqmkm eklssttkgv celedyhyge erkrpplfht wptahfyevs rklsdmysqe
      181 lrlkrvvveq lahttdrdla lsylsmwlhq pylegssrll lesmlletgh rtl
//
LOCUS       XP_061015442             222 aa            linear   MAM 02-DEC-2023
DEFINITION  cyclin-dependent kinase 2-interacting protein isoform X2 [Dama
            dama].
ACCESSION   XP_061015442
VERSION     XP_061015442.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159459.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..222
                     /product="cyclin-dependent kinase 2-interacting protein
                     isoform X2"
                     /calculated_mol_wt=25233
     CDS             1..222
                     /gene="CINP"
                     /coded_by="XM_061159459.1:295..963"
                     /db_xref="GeneID:133068255"
ORIGIN      
        1 myqalnkqvh ctgktlgtvt prkpvlsvsa rkikdnaadw hnlilkwetl ndggfatasn
       61 ianmkislls rdkielessg laaddpaeke haeysrelea lceelqttld gltkiqmkme
      121 klssttkgvc eledyhygee rkrpplfhtw ptahfyevsr klsdmysqel rlkrvvveql
      181 ahttdrdlal sylsmwlhqp ylegssrlll esmlletghr tl
//
LOCUS       XP_061015443             212 aa            linear   MAM 02-DEC-2023
DEFINITION  cyclin-dependent kinase 2-interacting protein isoform X3 [Dama
            dama].
ACCESSION   XP_061015443
VERSION     XP_061015443.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159460.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..212
                     /product="cyclin-dependent kinase 2-interacting protein
                     isoform X3"
                     /calculated_mol_wt=24076
     CDS             1..212
                     /gene="CINP"
                     /coded_by="XM_061159460.1:57..695"
                     /db_xref="GeneID:133068255"
ORIGIN      
        1 megktlgtvt prkpvlsvsa rkikdnaadw hnlilkwetl ndggfatasn ianmkislls
       61 rdkielessg laaddpaeke haeysrelea lceelqttld gltkiqmkme klssttkgvc
      121 eledyhygee rkrpplfhtw ptahfyevsr klsdmysqel rlkrvvveql ahttdrdlal
      181 sylsmwlhqp ylegssrlll esmlletghr tl
//
LOCUS       XP_061015444            1524 aa            linear   MAM 02-DEC-2023
DEFINITION  tectonin beta-propeller repeat-containing protein 2 isoform X1
            [Dama dama].
ACCESSION   XP_061015444
VERSION     XP_061015444.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159461.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1524
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1524
                     /product="tectonin beta-propeller repeat-containing
                     protein 2 isoform X1"
                     /calculated_mol_wt=163566
     Region          <2..>151
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          38..74
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          80..124
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          90..167
                     /region_name="ANAPC4_WD40"
                     /note="Anaphase-promoting complex subunit 4 WD40 domain;
                     pfam12894"
                     /db_xref="CDD:403945"
     Region          130..168
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          176..207
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          214..256
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          289..324
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          329..351
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          478..>752
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          942..969
                     /region_name="Hyd_WA"
                     /note="Propeller; pfam06462"
                     /db_xref="CDD:461921"
     Region          991..1022
                     /region_name="Hyd_WA"
                     /note="Propeller; pfam06462"
                     /db_xref="CDD:461921"
     Region          <1176..1309
                     /region_name="Tectonin"
                     /note="Tectonin domain; pfam19193"
                     /db_xref="CDD:465992"
     Region          1428..1457
                     /region_name="Hyd_WA"
                     /note="Propeller; pfam06462"
                     /db_xref="CDD:461921"
     CDS             1..1524
                     /gene="TECPR2"
                     /coded_by="XM_061159461.1:225..4799"
                     /db_xref="GeneID:133068256"
ORIGIN      
        1 masvsepvtf refcplyyll naiptriqkg frslvvylta ldtngdyiav gssigmlyly
       61 crqhgqmrky nfegrtesit vvkllscfdd lvaagtasgr vavfqlvssl pgrnkqlrrf
      121 dvtgihknsi talawspngm klfsgddkgk ivyssldldq gvcrshllle epasivqldy
      181 sqkvllvstl qrsllfhtee rsvqqvgaqp rrstgkfgac fipglckqsd ltlyasrpgl
      241 rlwkadihgt vqatfilkdv faggvkpfel yprldsaarg gcsspekhlg lvscffqegw
      301 vlswneysiy lldtvnqati aglegsgdiv svscteneif flkgdrniir issrpeglas
      361 ivkpaslpvr dgletsacse qvhgpraekl paatpsetrl rgssvassva seprsrsssl
      421 nstdsgsgpq tapelgrggp ltskrfsvis sedfdqelvv kplrvkkkkr tkktveggss
      481 ttgpsslest pgcecpgdsp qsvsmdlpsv asslgsivdr sstgspdqes slsgeaagvl
      541 peysdpeafs vlevplpapd llnrggdrra eiplddgegg telpagvvss swhppelveg
      601 sediveleee prpadggpgg aaearrerav qpdgpqgafs eacildsapv pshlswapsa
      661 eqqlpgatad egraeeppee qgflthvgap hhlslspwhg apdadtgqta vvtserdlgg
      721 ggqpppwasa saagaqeqtp rdqvltssde ediyghglps sssetsvtel gggrslqdlr
      781 qlgaddpgll kadqfaeswm gysgpghgil slavsekylw cldykgglfc salpgaglrw
      841 qkfedavqqv avspsgallw kieqksnraf acgkvtikgk rhwyealpqa vfvalsddta
      901 wiirtngdly lqtglsvdrp caravkvdcp fplsqvtarn svvwalteqr allyregvss
      961 fcpegeqwkc divserqale pvcitlgdqq slwaldirgn lwfrtgvvsk kpqgddghww
     1021 qvsitdyvvf dqcslfqtii hathsvataa qvpvekvadr lrtafwsqql qcqpsllgvn
     1081 nsgvwissgk nefhvargnl igtywnhvvp rgtasatkwa fvlastaptk egsslwlcqs
     1141 skdlcrvsaq haqsrpstvq lppdaemray aacqdalwal dslgqvfirt lsascptgmh
     1201 warldlsqlg avkltslacg nqhvwacdsr ggvyfrvgtq plnpslmlpa wiaieppvqp
     1261 agvtlvsvhc spddqtlwal dsrwnvhvra giteempvgt dwehvpgsga gqaaairgls
     1321 drrqqasvpi lpgwgphqqs tasqylgfia grsfpdrqgl wsnahsrifp adgasfpgap
     1381 alcrrglggr rlsgrvspsl lhpgpenrrt prlplglqac qlalstrtvw arcpngdlar
     1441 rygisdknpa gdywkkipgn vtcvtgrcwv pgtvggaggg lrgllplgwf sqtrpipgsc
     1501 ltgaqhrlcq glpgrggafh pleg
//
LOCUS       XP_061015445            1523 aa            linear   MAM 02-DEC-2023
DEFINITION  tectonin beta-propeller repeat-containing protein 2 isoform X2
            [Dama dama].
ACCESSION   XP_061015445
VERSION     XP_061015445.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159462.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1523
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1523
                     /product="tectonin beta-propeller repeat-containing
                     protein 2 isoform X2"
                     /calculated_mol_wt=163467
     Region          <2..>151
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          38..74
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          80..124
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          90..167
                     /region_name="ANAPC4_WD40"
                     /note="Anaphase-promoting complex subunit 4 WD40 domain;
                     pfam12894"
                     /db_xref="CDD:403945"
     Region          130..168
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          176..207
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          214..256
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          289..324
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          329..351
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          477..>751
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          941..968
                     /region_name="Hyd_WA"
                     /note="Propeller; pfam06462"
                     /db_xref="CDD:461921"
     Region          990..1021
                     /region_name="Hyd_WA"
                     /note="Propeller; pfam06462"
                     /db_xref="CDD:461921"
     Region          <1175..1308
                     /region_name="Tectonin"
                     /note="Tectonin domain; pfam19193"
                     /db_xref="CDD:465992"
     Region          1427..1456
                     /region_name="Hyd_WA"
                     /note="Propeller; pfam06462"
                     /db_xref="CDD:461921"
     CDS             1..1523
                     /gene="TECPR2"
                     /coded_by="XM_061159462.1:225..4796"
                     /db_xref="GeneID:133068256"
ORIGIN      
        1 masvsepvtf refcplyyll naiptriqkg frslvvylta ldtngdyiav gssigmlyly
       61 crqhgqmrky nfegrtesit vvkllscfdd lvaagtasgr vavfqlvssl pgrnkqlrrf
      121 dvtgihknsi talawspngm klfsgddkgk ivyssldldq gvcrshllle epasivqldy
      181 sqkvllvstl qrsllfhtee rsvqqvgaqp rrstgkfgac fipglckqsd ltlyasrpgl
      241 rlwkadihgt vqatfilkdv faggvkpfel yprldsaarg gcsspekhlg lvscffqegw
      301 vlswneysiy lldtvnqati aglegsgdiv svscteneif flkgdrniir issrpeglas
      361 ivkpaslpvr dgletsacse qvhgpraekl paatpsetrl rgssvassva seprsrsssl
      421 nstdsgsgpq tapelgrggp ltskrfsvis sedfdqelvv kplrvkkkkr tkkteggsst
      481 tgpsslestp gcecpgdspq svsmdlpsva sslgsivdrs stgspdqess lsgeaagvlp
      541 eysdpeafsv levplpapdl lnrggdrrae iplddgeggt elpagvvsss whppelvegs
      601 ediveleeep rpadggpgga aearreravq pdgpqgafse acildsapvp shlswapsae
      661 qqlpgatade graeeppeeq gflthvgaph hlslspwhga pdadtgqtav vtserdlggg
      721 gqpppwasas aagaqeqtpr dqvltssdee diyghglpss ssetsvtelg ggrslqdlrq
      781 lgaddpgllk adqfaeswmg ysgpghgils lavsekylwc ldykgglfcs alpgaglrwq
      841 kfedavqqva vspsgallwk ieqksnrafa cgkvtikgkr hwyealpqav fvalsddtaw
      901 iirtngdlyl qtglsvdrpc aravkvdcpf plsqvtarns vvwalteqra llyregvssf
      961 cpegeqwkcd ivserqalep vcitlgdqqs lwaldirgnl wfrtgvvskk pqgddghwwq
     1021 vsitdyvvfd qcslfqtiih athsvataaq vpvekvadrl rtafwsqqlq cqpsllgvnn
     1081 sgvwissgkn efhvargnli gtywnhvvpr gtasatkwaf vlastaptke gsslwlcqss
     1141 kdlcrvsaqh aqsrpstvql ppdaemraya acqdalwald slgqvfirtl sascptgmhw
     1201 arldlsqlga vkltslacgn qhvwacdsrg gvyfrvgtqp lnpslmlpaw iaieppvqpa
     1261 gvtlvsvhcs pddqtlwald srwnvhvrag iteempvgtd wehvpgsgag qaaairglsd
     1321 rrqqasvpil pgwgphqqst asqylgfiag rsfpdrqglw snahsrifpa dgasfpgapa
     1381 lcrrglggrr lsgrvspsll hpgpenrrtp rlplglqacq lalstrtvwa rcpngdlarr
     1441 ygisdknpag dywkkipgnv tcvtgrcwvp gtvggagggl rgllplgwfs qtrpipgscl
     1501 tgaqhrlcqg lpgrggafhp leg
//
LOCUS       XP_061015446            1515 aa            linear   MAM 02-DEC-2023
DEFINITION  tectonin beta-propeller repeat-containing protein 2 isoform X3
            [Dama dama].
ACCESSION   XP_061015446
VERSION     XP_061015446.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159463.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1515
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1515
                     /product="tectonin beta-propeller repeat-containing
                     protein 2 isoform X3"
                     /calculated_mol_wt=163225
     Region          <2..>151
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          38..74
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          80..124
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          90..167
                     /region_name="ANAPC4_WD40"
                     /note="Anaphase-promoting complex subunit 4 WD40 domain;
                     pfam12894"
                     /db_xref="CDD:403945"
     Region          130..168
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          176..207
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          214..256
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          289..324
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          329..351
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          478..>752
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          942..969
                     /region_name="Hyd_WA"
                     /note="Propeller; pfam06462"
                     /db_xref="CDD:461921"
     Region          991..1022
                     /region_name="Hyd_WA"
                     /note="Propeller; pfam06462"
                     /db_xref="CDD:461921"
     Region          <1176..1309
                     /region_name="Tectonin"
                     /note="Tectonin domain; pfam19193"
                     /db_xref="CDD:465992"
     Region          1428..1457
                     /region_name="Hyd_WA"
                     /note="Propeller; pfam06462"
                     /db_xref="CDD:461921"
     Region          1452..1484
                     /region_name="TECPR"
                     /note="Beta propeller repeats in Physarum polycephalum
                     tectonins, Limulus lectin L-6 and animal hypothetical
                     proteins; smart00706"
                     /db_xref="CDD:214782"
     CDS             1..1515
                     /gene="TECPR2"
                     /coded_by="XM_061159463.1:225..4772"
                     /db_xref="GeneID:133068256"
ORIGIN      
        1 masvsepvtf refcplyyll naiptriqkg frslvvylta ldtngdyiav gssigmlyly
       61 crqhgqmrky nfegrtesit vvkllscfdd lvaagtasgr vavfqlvssl pgrnkqlrrf
      121 dvtgihknsi talawspngm klfsgddkgk ivyssldldq gvcrshllle epasivqldy
      181 sqkvllvstl qrsllfhtee rsvqqvgaqp rrstgkfgac fipglckqsd ltlyasrpgl
      241 rlwkadihgt vqatfilkdv faggvkpfel yprldsaarg gcsspekhlg lvscffqegw
      301 vlswneysiy lldtvnqati aglegsgdiv svscteneif flkgdrniir issrpeglas
      361 ivkpaslpvr dgletsacse qvhgpraekl paatpsetrl rgssvassva seprsrsssl
      421 nstdsgsgpq tapelgrggp ltskrfsvis sedfdqelvv kplrvkkkkr tkktveggss
      481 ttgpsslest pgcecpgdsp qsvsmdlpsv asslgsivdr sstgspdqes slsgeaagvl
      541 peysdpeafs vlevplpapd llnrggdrra eiplddgegg telpagvvss swhppelveg
      601 sediveleee prpadggpgg aaearrerav qpdgpqgafs eacildsapv pshlswapsa
      661 eqqlpgatad egraeeppee qgflthvgap hhlslspwhg apdadtgqta vvtserdlgg
      721 ggqpppwasa saagaqeqtp rdqvltssde ediyghglps sssetsvtel gggrslqdlr
      781 qlgaddpgll kadqfaeswm gysgpghgil slavsekylw cldykgglfc salpgaglrw
      841 qkfedavqqv avspsgallw kieqksnraf acgkvtikgk rhwyealpqa vfvalsddta
      901 wiirtngdly lqtglsvdrp caravkvdcp fplsqvtarn svvwalteqr allyregvss
      961 fcpegeqwkc divserqale pvcitlgdqq slwaldirgn lwfrtgvvsk kpqgddghww
     1021 qvsitdyvvf dqcslfqtii hathsvataa qvpvekvadr lrtafwsqql qcqpsllgvn
     1081 nsgvwissgk nefhvargnl igtywnhvvp rgtasatkwa fvlastaptk egsslwlcqs
     1141 skdlcrvsaq haqsrpstvq lppdaemray aacqdalwal dslgqvfirt lsascptgmh
     1201 warldlsqlg avkltslacg nqhvwacdsr ggvyfrvgtq plnpslmlpa wiaieppvqp
     1261 agvtlvsvhc spddqtlwal dsrwnvhvra giteempvgt dwehvpgsga gqaaairgls
     1321 drrqqasvpi lpgwgphqqs tasqylgfia grsfpdrqgl wsnahsrifp adgasfpgap
     1381 alcrrglggr rlsgrvspsl lhpgpenrrt prlplglqac qlalstrtvw arcpngdlar
     1441 rygisdknpa gdywkkipgn vtcvtvtssd elwavgppgy llqrltrtfr hshgaqgsha
     1501 ttphpedled ewevi
//
LOCUS       XP_061015447            1512 aa            linear   MAM 02-DEC-2023
DEFINITION  tectonin beta-propeller repeat-containing protein 2 isoform X4
            [Dama dama].
ACCESSION   XP_061015447
VERSION     XP_061015447.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159464.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1512
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1512
                     /product="tectonin beta-propeller repeat-containing
                     protein 2 isoform X4"
                     /calculated_mol_wt=162357
     Region          <2..>151
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          38..74
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          80..124
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          130..168
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          176..207
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          214..256
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          289..324
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          329..351
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          478..>752
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          930..957
                     /region_name="Hyd_WA"
                     /note="Propeller; pfam06462"
                     /db_xref="CDD:461921"
     Region          979..1010
                     /region_name="Hyd_WA"
                     /note="Propeller; pfam06462"
                     /db_xref="CDD:461921"
     Region          <1164..1297
                     /region_name="Tectonin"
                     /note="Tectonin domain; pfam19193"
                     /db_xref="CDD:465992"
     Region          1416..1445
                     /region_name="Hyd_WA"
                     /note="Propeller; pfam06462"
                     /db_xref="CDD:461921"
     CDS             1..1512
                     /gene="TECPR2"
                     /coded_by="XM_061159464.1:225..4763"
                     /db_xref="GeneID:133068256"
ORIGIN      
        1 masvsepvtf refcplyyll naiptriqkg frslvvylta ldtngdyiav gssigmlyly
       61 crqhgqmrky nfegrtesit vvkllscfdd lvaagtasgr vavfqlvssl pgrnkqlrrf
      121 dvtgihknsi talawspngm klfsgddkgk ivyssldldq gvcrshllle epasivqldy
      181 sqkvllvstl qrsllfhtee rsvqqvgaqp rrstgkfgac fipglckqsd ltlyasrpgl
      241 rlwkadihgt vqatfilkdv faggvkpfel yprldsaarg gcsspekhlg lvscffqegw
      301 vlswneysiy lldtvnqati aglegsgdiv svscteneif flkgdrniir issrpeglas
      361 ivkpaslpvr dgletsacse qvhgpraekl paatpsetrl rgssvassva seprsrsssl
      421 nstdsgsgpq tapelgrggp ltskrfsvis sedfdqelvv kplrvkkkkr tkktveggss
      481 ttgpsslest pgcecpgdsp qsvsmdlpsv asslgsivdr sstgspdqes slsgeaagvl
      541 peysdpeafs vlevplpapd llnrggdrra eiplddgegg telpagvvss swhppelveg
      601 sediveleee prpadggpgg aaearrerav qpdgpqgafs eacildsapv pshlswapsa
      661 eqqlpgatad egraeeppee qgflthvgap hhlslspwhg apdadtgqta vvtserdlgg
      721 ggqpppwasa saagaqeqtp rdqvltssde ediyghglps sssetsvtel gggrslqdlr
      781 qlgaddpgll kadqfaeswm gysgpghgil slavsekylw cldykgglfc salpgaglrw
      841 qkfedavqqi eqksnrafac gkvtikgkrh wyealpqavf valsddtawi irtngdlylq
      901 tglsvdrpca ravkvdcpfp lsqvtarnsv vwalteqral lyregvssfc pegeqwkcdi
      961 vserqalepv citlgdqqsl waldirgnlw frtgvvskkp qgddghwwqv sitdyvvfdq
     1021 cslfqtiiha thsvataaqv pvekvadrlr tafwsqqlqc qpsllgvnns gvwissgkne
     1081 fhvargnlig tywnhvvprg tasatkwafv lastaptkeg sslwlcqssk dlcrvsaqha
     1141 qsrpstvqlp pdaemrayaa cqdalwalds lgqvfirtls ascptgmhwa rldlsqlgav
     1201 kltslacgnq hvwacdsrgg vyfrvgtqpl npslmlpawi aieppvqpag vtlvsvhcsp
     1261 ddqtlwalds rwnvhvragi teempvgtdw ehvpgsgagq aaairglsdr rqqasvpilp
     1321 gwgphqqsta sqylgfiagr sfpdrqglws nahsrifpad gasfpgapal crrglggrrl
     1381 sgrvspsllh pgpenrrtpr lplglqacql alstrtvwar cpngdlarry gisdknpagd
     1441 ywkkipgnvt cvtgrcwvpg tvggaggglr gllplgwfsq trpipgsclt gaqhrlcqgl
     1501 pgrggafhpl eg
//
LOCUS       XP_061015448            1415 aa            linear   MAM 02-DEC-2023
DEFINITION  tectonin beta-propeller repeat-containing protein 2 isoform X5
            [Dama dama].
ACCESSION   XP_061015448
VERSION     XP_061015448.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159465.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1415
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1415
                     /product="tectonin beta-propeller repeat-containing
                     protein 2 isoform X5"
                     /calculated_mol_wt=152067
     Region          <2..>151
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          38..74
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          80..124
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          130..168
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          176..207
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          214..256
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          289..324
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          329..351
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          478..>752
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          942..969
                     /region_name="Hyd_WA"
                     /note="Propeller; pfam06462"
                     /db_xref="CDD:461921"
     Region          991..1022
                     /region_name="Hyd_WA"
                     /note="Propeller; pfam06462"
                     /db_xref="CDD:461921"
     Region          1174..1361
                     /region_name="Tectonin"
                     /note="Tectonin domain; pfam19193"
                     /db_xref="CDD:465992"
     CDS             1..1415
                     /gene="TECPR2"
                     /coded_by="XM_061159465.1:225..4472"
                     /db_xref="GeneID:133068256"
ORIGIN      
        1 masvsepvtf refcplyyll naiptriqkg frslvvylta ldtngdyiav gssigmlyly
       61 crqhgqmrky nfegrtesit vvkllscfdd lvaagtasgr vavfqlvssl pgrnkqlrrf
      121 dvtgihknsi talawspngm klfsgddkgk ivyssldldq gvcrshllle epasivqldy
      181 sqkvllvstl qrsllfhtee rsvqqvgaqp rrstgkfgac fipglckqsd ltlyasrpgl
      241 rlwkadihgt vqatfilkdv faggvkpfel yprldsaarg gcsspekhlg lvscffqegw
      301 vlswneysiy lldtvnqati aglegsgdiv svscteneif flkgdrniir issrpeglas
      361 ivkpaslpvr dgletsacse qvhgpraekl paatpsetrl rgssvassva seprsrsssl
      421 nstdsgsgpq tapelgrggp ltskrfsvis sedfdqelvv kplrvkkkkr tkktveggss
      481 ttgpsslest pgcecpgdsp qsvsmdlpsv asslgsivdr sstgspdqes slsgeaagvl
      541 peysdpeafs vlevplpapd llnrggdrra eiplddgegg telpagvvss swhppelveg
      601 sediveleee prpadggpgg aaearrerav qpdgpqgafs eacildsapv pshlswapsa
      661 eqqlpgatad egraeeppee qgflthvgap hhlslspwhg apdadtgqta vvtserdlgg
      721 ggqpppwasa saagaqeqtp rdqvltssde ediyghglps sssetsvtel gggrslqdlr
      781 qlgaddpgll kadqfaeswm gysgpghgil slavsekylw cldykgglfc salpgaglrw
      841 qkfedavqqv avspsgallw kieqksnraf acgkvtikgk rhwyealpqa vfvalsddta
      901 wiirtngdly lqtglsvdrp caravkvdcp fplsqvtarn svvwalteqr allyregvss
      961 fcpegeqwkc divserqale pvcitlgdqq slwaldirgn lwfrtgvvsk kpqgddghww
     1021 qvsitdyvvf dqcslfqtii hathsvataa qvpvekvadr lrtafwsqql qcqpsllgvn
     1081 nsgvwissgk nefhvargnl igtywnhvvp rgtasatkwa fvlastaptk egsslwlcqs
     1141 skdlcrvsaq haqsrpstvq lppdaemray aacqdalwal dslgqvfirt lsascptgmh
     1201 warldlsqlg avkltslacg nqhvwacdsr ggvyfrvgtq plnpslmlpa wiaieppvqp
     1261 agvtlvsvhc spddqtlwal dsrwnvhvra giteempvgt dwehvpglqa cqlalstrtv
     1321 warcpngdla rrygisdknp agdywkkipg nvtcvtgrcw vpgtvggagg glrgllplgw
     1381 fsqtrpipgs cltgaqhrlc qglpgrggaf hpleg
//
LOCUS       XP_061015449            1406 aa            linear   MAM 02-DEC-2023
DEFINITION  tectonin beta-propeller repeat-containing protein 2 isoform X6
            [Dama dama].
ACCESSION   XP_061015449
VERSION     XP_061015449.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159466.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1406
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1406
                     /product="tectonin beta-propeller repeat-containing
                     protein 2 isoform X6"
                     /calculated_mol_wt=151726
     Region          <2..>151
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          38..74
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          80..124
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          130..168
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          176..207
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          214..256
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          289..324
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          329..351
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          478..>752
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          942..969
                     /region_name="Hyd_WA"
                     /note="Propeller; pfam06462"
                     /db_xref="CDD:461921"
     Region          991..1022
                     /region_name="Hyd_WA"
                     /note="Propeller; pfam06462"
                     /db_xref="CDD:461921"
     Region          1174..1367
                     /region_name="Tectonin"
                     /note="Tectonin domain; pfam19193"
                     /db_xref="CDD:465992"
     CDS             1..1406
                     /gene="TECPR2"
                     /coded_by="XM_061159466.1:225..4445"
                     /db_xref="GeneID:133068256"
ORIGIN      
        1 masvsepvtf refcplyyll naiptriqkg frslvvylta ldtngdyiav gssigmlyly
       61 crqhgqmrky nfegrtesit vvkllscfdd lvaagtasgr vavfqlvssl pgrnkqlrrf
      121 dvtgihknsi talawspngm klfsgddkgk ivyssldldq gvcrshllle epasivqldy
      181 sqkvllvstl qrsllfhtee rsvqqvgaqp rrstgkfgac fipglckqsd ltlyasrpgl
      241 rlwkadihgt vqatfilkdv faggvkpfel yprldsaarg gcsspekhlg lvscffqegw
      301 vlswneysiy lldtvnqati aglegsgdiv svscteneif flkgdrniir issrpeglas
      361 ivkpaslpvr dgletsacse qvhgpraekl paatpsetrl rgssvassva seprsrsssl
      421 nstdsgsgpq tapelgrggp ltskrfsvis sedfdqelvv kplrvkkkkr tkktveggss
      481 ttgpsslest pgcecpgdsp qsvsmdlpsv asslgsivdr sstgspdqes slsgeaagvl
      541 peysdpeafs vlevplpapd llnrggdrra eiplddgegg telpagvvss swhppelveg
      601 sediveleee prpadggpgg aaearrerav qpdgpqgafs eacildsapv pshlswapsa
      661 eqqlpgatad egraeeppee qgflthvgap hhlslspwhg apdadtgqta vvtserdlgg
      721 ggqpppwasa saagaqeqtp rdqvltssde ediyghglps sssetsvtel gggrslqdlr
      781 qlgaddpgll kadqfaeswm gysgpghgil slavsekylw cldykgglfc salpgaglrw
      841 qkfedavqqv avspsgallw kieqksnraf acgkvtikgk rhwyealpqa vfvalsddta
      901 wiirtngdly lqtglsvdrp caravkvdcp fplsqvtarn svvwalteqr allyregvss
      961 fcpegeqwkc divserqale pvcitlgdqq slwaldirgn lwfrtgvvsk kpqgddghww
     1021 qvsitdyvvf dqcslfqtii hathsvataa qvpvekvadr lrtafwsqql qcqpsllgvn
     1081 nsgvwissgk nefhvargnl igtywnhvvp rgtasatkwa fvlastaptk egsslwlcqs
     1141 skdlcrvsaq haqsrpstvq lppdaemray aacqdalwal dslgqvfirt lsascptgmh
     1201 warldlsqlg avkltslacg nqhvwacdsr ggvyfrvgtq plnpslmlpa wiaieppvqp
     1261 agvtlvsvhc spddqtlwal dsrwnvhvra giteempvgt dwehvpglqa cqlalstrtv
     1321 warcpngdla rrygisdknp agdywkkipg nvtcvtvtss delwavgppg yllqrltrtf
     1381 rhshgaqgsh attphpedle dewevi
//
LOCUS       XP_061015450            1405 aa            linear   MAM 02-DEC-2023
DEFINITION  tectonin beta-propeller repeat-containing protein 2 isoform X7
            [Dama dama].
ACCESSION   XP_061015450
VERSION     XP_061015450.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159467.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1405
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1405
                     /product="tectonin beta-propeller repeat-containing
                     protein 2 isoform X7"
                     /calculated_mol_wt=151627
     Region          <2..>151
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          38..74
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          80..124
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          130..168
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          176..207
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          214..256
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          289..324
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          329..351
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          477..>751
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          941..968
                     /region_name="Hyd_WA"
                     /note="Propeller; pfam06462"
                     /db_xref="CDD:461921"
     Region          990..1021
                     /region_name="Hyd_WA"
                     /note="Propeller; pfam06462"
                     /db_xref="CDD:461921"
     Region          1173..1366
                     /region_name="Tectonin"
                     /note="Tectonin domain; pfam19193"
                     /db_xref="CDD:465992"
     CDS             1..1405
                     /gene="TECPR2"
                     /coded_by="XM_061159467.1:225..4442"
                     /db_xref="GeneID:133068256"
ORIGIN      
        1 masvsepvtf refcplyyll naiptriqkg frslvvylta ldtngdyiav gssigmlyly
       61 crqhgqmrky nfegrtesit vvkllscfdd lvaagtasgr vavfqlvssl pgrnkqlrrf
      121 dvtgihknsi talawspngm klfsgddkgk ivyssldldq gvcrshllle epasivqldy
      181 sqkvllvstl qrsllfhtee rsvqqvgaqp rrstgkfgac fipglckqsd ltlyasrpgl
      241 rlwkadihgt vqatfilkdv faggvkpfel yprldsaarg gcsspekhlg lvscffqegw
      301 vlswneysiy lldtvnqati aglegsgdiv svscteneif flkgdrniir issrpeglas
      361 ivkpaslpvr dgletsacse qvhgpraekl paatpsetrl rgssvassva seprsrsssl
      421 nstdsgsgpq tapelgrggp ltskrfsvis sedfdqelvv kplrvkkkkr tkkteggsst
      481 tgpsslestp gcecpgdspq svsmdlpsva sslgsivdrs stgspdqess lsgeaagvlp
      541 eysdpeafsv levplpapdl lnrggdrrae iplddgeggt elpagvvsss whppelvegs
      601 ediveleeep rpadggpgga aearreravq pdgpqgafse acildsapvp shlswapsae
      661 qqlpgatade graeeppeeq gflthvgaph hlslspwhga pdadtgqtav vtserdlggg
      721 gqpppwasas aagaqeqtpr dqvltssdee diyghglpss ssetsvtelg ggrslqdlrq
      781 lgaddpgllk adqfaeswmg ysgpghgils lavsekylwc ldykgglfcs alpgaglrwq
      841 kfedavqqva vspsgallwk ieqksnrafa cgkvtikgkr hwyealpqav fvalsddtaw
      901 iirtngdlyl qtglsvdrpc aravkvdcpf plsqvtarns vvwalteqra llyregvssf
      961 cpegeqwkcd ivserqalep vcitlgdqqs lwaldirgnl wfrtgvvskk pqgddghwwq
     1021 vsitdyvvfd qcslfqtiih athsvataaq vpvekvadrl rtafwsqqlq cqpsllgvnn
     1081 sgvwissgkn efhvargnli gtywnhvvpr gtasatkwaf vlastaptke gsslwlcqss
     1141 kdlcrvsaqh aqsrpstvql ppdaemraya acqdalwald slgqvfirtl sascptgmhw
     1201 arldlsqlga vkltslacgn qhvwacdsrg gvyfrvgtqp lnpslmlpaw iaieppvqpa
     1261 gvtlvsvhcs pddqtlwald srwnvhvrag iteempvgtd wehvpglqac qlalstrtvw
     1321 arcpngdlar rygisdknpa gdywkkipgn vtcvtvtssd elwavgppgy llqrltrtfr
     1381 hshgaqgsha ttphpedled ewevi
//
LOCUS       XP_061015451            1366 aa            linear   MAM 02-DEC-2023
DEFINITION  tectonin beta-propeller repeat-containing protein 2 isoform X8
            [Dama dama].
ACCESSION   XP_061015451
VERSION     XP_061015451.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159468.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1366
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1366
                     /product="tectonin beta-propeller repeat-containing
                     protein 2 isoform X8"
                     /calculated_mol_wt=146829
     Region          <2..>151
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          38..74
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          80..124
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          130..168
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          176..207
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          214..256
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          289..324
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          329..351
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          478..>752
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          942..969
                     /region_name="Hyd_WA"
                     /note="Propeller; pfam06462"
                     /db_xref="CDD:461921"
     Region          991..1022
                     /region_name="Hyd_WA"
                     /note="Propeller; pfam06462"
                     /db_xref="CDD:461921"
     Region          1176..1201
                     /region_name="Hyd_WA"
                     /note="Propeller; pfam06462"
                     /db_xref="CDD:461921"
     Region          1223..1254
                     /region_name="Hyd_WA"
                     /note="Propeller; pfam06462"
                     /db_xref="CDD:461921"
     CDS             1..1366
                     /gene="TECPR2"
                     /coded_by="XM_061159468.1:225..4325"
                     /db_xref="GeneID:133068256"
ORIGIN      
        1 masvsepvtf refcplyyll naiptriqkg frslvvylta ldtngdyiav gssigmlyly
       61 crqhgqmrky nfegrtesit vvkllscfdd lvaagtasgr vavfqlvssl pgrnkqlrrf
      121 dvtgihknsi talawspngm klfsgddkgk ivyssldldq gvcrshllle epasivqldy
      181 sqkvllvstl qrsllfhtee rsvqqvgaqp rrstgkfgac fipglckqsd ltlyasrpgl
      241 rlwkadihgt vqatfilkdv faggvkpfel yprldsaarg gcsspekhlg lvscffqegw
      301 vlswneysiy lldtvnqati aglegsgdiv svscteneif flkgdrniir issrpeglas
      361 ivkpaslpvr dgletsacse qvhgpraekl paatpsetrl rgssvassva seprsrsssl
      421 nstdsgsgpq tapelgrggp ltskrfsvis sedfdqelvv kplrvkkkkr tkktveggss
      481 ttgpsslest pgcecpgdsp qsvsmdlpsv asslgsivdr sstgspdqes slsgeaagvl
      541 peysdpeafs vlevplpapd llnrggdrra eiplddgegg telpagvvss swhppelveg
      601 sediveleee prpadggpgg aaearrerav qpdgpqgafs eacildsapv pshlswapsa
      661 eqqlpgatad egraeeppee qgflthvgap hhlslspwhg apdadtgqta vvtserdlgg
      721 ggqpppwasa saagaqeqtp rdqvltssde ediyghglps sssetsvtel gggrslqdlr
      781 qlgaddpgll kadqfaeswm gysgpghgil slavsekylw cldykgglfc salpgaglrw
      841 qkfedavqqv avspsgallw kieqksnraf acgkvtikgk rhwyealpqa vfvalsddta
      901 wiirtngdly lqtglsvdrp caravkvdcp fplsqvtarn svvwalteqr allyregvss
      961 fcpegeqwkc divserqale pvcitlgdqq slwaldirgn lwfrtgvvsk kpqgddghww
     1021 qvsitdyvvf dqcslfqtii hathsvataa qvpvekvadr lrtafwsqql qcqpsllgvn
     1081 nsgvwissgk nefhvargnl igtywnhvvp rgtasatkwa fvlastaptk egsslwlcqs
     1141 skdlcrvsaq haqsrpstvq lppdaemray aacqdalwal dslgqvfirt lsascptgmh
     1201 warldlsqlg avkltslacg nqhvwacdsr ggvyfrvgtq plnpslmlpa wiaieppvqa
     1261 ageperpsvl vhlsaagccq vldaledrer hyhtphghac pfcrrafpsg hpldtrvpeg
     1321 happsrsqps tghvpvpggg lhgdvrdqqr pgeapvtcpl tlqtpp
//
LOCUS       XP_061015452            1321 aa            linear   MAM 02-DEC-2023
DEFINITION  tectonin beta-propeller repeat-containing protein 2 isoform X9
            [Dama dama].
ACCESSION   XP_061015452
VERSION     XP_061015452.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159469.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1321
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1321
                     /product="tectonin beta-propeller repeat-containing
                     protein 2 isoform X9"
                     /calculated_mol_wt=140849
     Region          275..>549
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          739..766
                     /region_name="Hyd_WA"
                     /note="Propeller; pfam06462"
                     /db_xref="CDD:461921"
     Region          788..819
                     /region_name="Hyd_WA"
                     /note="Propeller; pfam06462"
                     /db_xref="CDD:461921"
     Region          <973..1106
                     /region_name="Tectonin"
                     /note="Tectonin domain; pfam19193"
                     /db_xref="CDD:465992"
     Region          1225..1254
                     /region_name="Hyd_WA"
                     /note="Propeller; pfam06462"
                     /db_xref="CDD:461921"
     CDS             1..1321
                     /gene="TECPR2"
                     /coded_by="XM_061159469.1:3129..7094"
                     /db_xref="GeneID:133068256"
ORIGIN      
        1 mlqlkpgaan tgkfgacfip glckqsdltl yasrpglrlw kadihgtvqa tfilkdvfag
       61 gvkpfelypr ldsaarggcs spekhlglvs cffqegwvls wneysiylld tvnqatiagl
      121 egsgdivsvs cteneifflk gdrniiriss rpeglasivk paslpvrdgl etsacseqvh
      181 gpraeklpaa tpsetrlrgs svassvasep rsrssslnst dsgsgpqtap elgrggplts
      241 krfsvissed fdqelvvkpl rvkkkkrtkk tveggssttg psslestpgc ecpgdspqsv
      301 smdlpsvass lgsivdrsst gspdqessls geaagvlpey sdpeafsvle vplpapdlln
      361 rggdrraeip lddgeggtel pagvvssswh ppelvegsed iveleeeprp adggpggaae
      421 arreravqpd gpqgafseac ildsapvpsh lswapsaeqq lpgatadegr aeeppeeqgf
      481 lthvgaphhl slspwhgapd adtgqtavvt serdlggggq pppwasasaa gaqeqtprdq
      541 vltssdeedi yghglpssss etsvtelggg rslqdlrqlg addpgllkad qfaeswmgys
      601 gpghgilsla vsekylwcld ykgglfcsal pgaglrwqkf edavqqvavs psgallwkie
      661 qksnrafacg kvtikgkrhw yealpqavfv alsddtawii rtngdlylqt glsvdrpcar
      721 avkvdcpfpl sqvtarnsvv walteqrall yregvssfcp egeqwkcdiv serqalepvc
      781 itlgdqqslw aldirgnlwf rtgvvskkpq gddghwwqvs itdyvvfdqc slfqtiihat
      841 hsvataaqvp vekvadrlrt afwsqqlqcq psllgvnnsg vwissgknef hvargnligt
      901 ywnhvvprgt asatkwafvl astaptkegs slwlcqsskd lcrvsaqhaq srpstvqlpp
      961 daemrayaac qdalwaldsl gqvfirtlsa scptgmhwar ldlsqlgavk ltslacgnqh
     1021 vwacdsrggv yfrvgtqpln pslmlpawia ieppvqpagv tlvsvhcspd dqtlwaldsr
     1081 wnvhvragit eempvgtdwe hvpgsgagqa aairglsdrr qqasvpilpg wgphqqstas
     1141 qylgfiagrs fpdrqglwsn ahsrifpadg asfpgapalc rrglggrrls grvspsllhp
     1201 gpenrrtprl plglqacqla lstrtvwarc pngdlarryg isdknpagdy wkkipgnvtc
     1261 vtgrcwvpgt vggaggglrg llplgwfsqt rpipgscltg aqhrlcqglp grggafhple
     1321 g
//
LOCUS       XP_061015453            1312 aa            linear   MAM 02-DEC-2023
DEFINITION  tectonin beta-propeller repeat-containing protein 2 isoform X10
            [Dama dama].
ACCESSION   XP_061015453
VERSION     XP_061015453.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159470.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1312
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1312
                     /product="tectonin beta-propeller repeat-containing
                     protein 2 isoform X10"
                     /calculated_mol_wt=141113
     Region          <2..>151
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          38..74
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          80..124
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          130..168
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          176..207
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          214..256
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          289..324
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          329..351
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          478..>752
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          942..969
                     /region_name="Hyd_WA"
                     /note="Propeller; pfam06462"
                     /db_xref="CDD:461921"
     Region          991..1022
                     /region_name="Hyd_WA"
                     /note="Propeller; pfam06462"
                     /db_xref="CDD:461921"
     Region          1176..1201
                     /region_name="Hyd_WA"
                     /note="Propeller; pfam06462"
                     /db_xref="CDD:461921"
     Region          1223..>1245
                     /region_name="Hyd_WA"
                     /note="Propeller; pfam06462"
                     /db_xref="CDD:461921"
     CDS             1..1312
                     /gene="TECPR2"
                     /coded_by="XM_061159470.1:225..4163"
                     /db_xref="GeneID:133068256"
ORIGIN      
        1 masvsepvtf refcplyyll naiptriqkg frslvvylta ldtngdyiav gssigmlyly
       61 crqhgqmrky nfegrtesit vvkllscfdd lvaagtasgr vavfqlvssl pgrnkqlrrf
      121 dvtgihknsi talawspngm klfsgddkgk ivyssldldq gvcrshllle epasivqldy
      181 sqkvllvstl qrsllfhtee rsvqqvgaqp rrstgkfgac fipglckqsd ltlyasrpgl
      241 rlwkadihgt vqatfilkdv faggvkpfel yprldsaarg gcsspekhlg lvscffqegw
      301 vlswneysiy lldtvnqati aglegsgdiv svscteneif flkgdrniir issrpeglas
      361 ivkpaslpvr dgletsacse qvhgpraekl paatpsetrl rgssvassva seprsrsssl
      421 nstdsgsgpq tapelgrggp ltskrfsvis sedfdqelvv kplrvkkkkr tkktveggss
      481 ttgpsslest pgcecpgdsp qsvsmdlpsv asslgsivdr sstgspdqes slsgeaagvl
      541 peysdpeafs vlevplpapd llnrggdrra eiplddgegg telpagvvss swhppelveg
      601 sediveleee prpadggpgg aaearrerav qpdgpqgafs eacildsapv pshlswapsa
      661 eqqlpgatad egraeeppee qgflthvgap hhlslspwhg apdadtgqta vvtserdlgg
      721 ggqpppwasa saagaqeqtp rdqvltssde ediyghglps sssetsvtel gggrslqdlr
      781 qlgaddpgll kadqfaeswm gysgpghgil slavsekylw cldykgglfc salpgaglrw
      841 qkfedavqqv avspsgallw kieqksnraf acgkvtikgk rhwyealpqa vfvalsddta
      901 wiirtngdly lqtglsvdrp caravkvdcp fplsqvtarn svvwalteqr allyregvss
      961 fcpegeqwkc divserqale pvcitlgdqq slwaldirgn lwfrtgvvsk kpqgddghww
     1021 qvsitdyvvf dqcslfqtii hathsvataa qvpvekvadr lrtafwsqql qcqpsllgvn
     1081 nsgvwissgk nefhvargnl igtywnhvvp rgtasatkwa fvlastaptk egsslwlcqs
     1141 skdlcrvsaq haqsrpstvq lppdaemray aacqdalwal dslgqvfirt lsascptgmh
     1201 warldlsqlg avkltslacg nqhvwacdsr ggvyfrvgtq plnpslmlpa wiaieppvqi
     1261 prvsstignl svsslpslsm tisrsihvaa kgiilfffmv sniplcirtt ss
//
LOCUS       XP_061015454            1295 aa            linear   MAM 02-DEC-2023
DEFINITION  tectonin beta-propeller repeat-containing protein 2 isoform X11
            [Dama dama].
ACCESSION   XP_061015454
VERSION     XP_061015454.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159471.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1295
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1295
                     /product="tectonin beta-propeller repeat-containing
                     protein 2 isoform X11"
                     /calculated_mol_wt=139065
     Region          <2..>151
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          38..74
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          80..124
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          130..168
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          176..207
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          214..256
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          289..324
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          329..351
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          478..>752
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          942..969
                     /region_name="Hyd_WA"
                     /note="Propeller; pfam06462"
                     /db_xref="CDD:461921"
     Region          991..1022
                     /region_name="Hyd_WA"
                     /note="Propeller; pfam06462"
                     /db_xref="CDD:461921"
     Region          1176..1201
                     /region_name="Hyd_WA"
                     /note="Propeller; pfam06462"
                     /db_xref="CDD:461921"
     Region          1223..>1245
                     /region_name="Hyd_WA"
                     /note="Propeller; pfam06462"
                     /db_xref="CDD:461921"
     CDS             1..1295
                     /gene="TECPR2"
                     /coded_by="XM_061159471.1:225..4112"
                     /db_xref="GeneID:133068256"
ORIGIN      
        1 masvsepvtf refcplyyll naiptriqkg frslvvylta ldtngdyiav gssigmlyly
       61 crqhgqmrky nfegrtesit vvkllscfdd lvaagtasgr vavfqlvssl pgrnkqlrrf
      121 dvtgihknsi talawspngm klfsgddkgk ivyssldldq gvcrshllle epasivqldy
      181 sqkvllvstl qrsllfhtee rsvqqvgaqp rrstgkfgac fipglckqsd ltlyasrpgl
      241 rlwkadihgt vqatfilkdv faggvkpfel yprldsaarg gcsspekhlg lvscffqegw
      301 vlswneysiy lldtvnqati aglegsgdiv svscteneif flkgdrniir issrpeglas
      361 ivkpaslpvr dgletsacse qvhgpraekl paatpsetrl rgssvassva seprsrsssl
      421 nstdsgsgpq tapelgrggp ltskrfsvis sedfdqelvv kplrvkkkkr tkktveggss
      481 ttgpsslest pgcecpgdsp qsvsmdlpsv asslgsivdr sstgspdqes slsgeaagvl
      541 peysdpeafs vlevplpapd llnrggdrra eiplddgegg telpagvvss swhppelveg
      601 sediveleee prpadggpgg aaearrerav qpdgpqgafs eacildsapv pshlswapsa
      661 eqqlpgatad egraeeppee qgflthvgap hhlslspwhg apdadtgqta vvtserdlgg
      721 ggqpppwasa saagaqeqtp rdqvltssde ediyghglps sssetsvtel gggrslqdlr
      781 qlgaddpgll kadqfaeswm gysgpghgil slavsekylw cldykgglfc salpgaglrw
      841 qkfedavqqv avspsgallw kieqksnraf acgkvtikgk rhwyealpqa vfvalsddta
      901 wiirtngdly lqtglsvdrp caravkvdcp fplsqvtarn svvwalteqr allyregvss
      961 fcpegeqwkc divserqale pvcitlgdqq slwaldirgn lwfrtgvvsk kpqgddghww
     1021 qvsitdyvvf dqcslfqtii hathsvataa qvpvekvadr lrtafwsqql qcqpsllgvn
     1081 nsgvwissgk nefhvargnl igtywnhvvp rgtasatkwa fvlastaptk egsslwlcqs
     1141 skdlcrvsaq haqsrpstvq lppdaemray aacqdalwal dslgqvfirt lsascptgmh
     1201 warldlsqlg avkltslacg nqhvwacdsr ggvyfrvgtq plnpslmlpa wiaieppvqs
     1261 fpasgsfqms wlfasggqsi gasasasvlp vnied
//
LOCUS       XP_061015455            1170 aa            linear   MAM 02-DEC-2023
DEFINITION  tectonin beta-propeller repeat-containing protein 2 isoform X12
            [Dama dama].
ACCESSION   XP_061015455
VERSION     XP_061015455.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159472.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1170
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1170
                     /product="tectonin beta-propeller repeat-containing
                     protein 2 isoform X12"
                     /calculated_mol_wt=125836
     Region          <2..>151
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          38..74
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          80..124
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          130..168
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          176..207
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          214..256
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          289..324
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          329..351
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          478..>752
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          942..969
                     /region_name="Hyd_WA"
                     /note="Propeller; pfam06462"
                     /db_xref="CDD:461921"
     Region          991..1021
                     /region_name="Hyd_WA"
                     /note="Propeller; pfam06462"
                     /db_xref="CDD:461921"
     CDS             1..1170
                     /gene="TECPR2"
                     /coded_by="XM_061159472.1:225..3737"
                     /db_xref="GeneID:133068256"
ORIGIN      
        1 masvsepvtf refcplyyll naiptriqkg frslvvylta ldtngdyiav gssigmlyly
       61 crqhgqmrky nfegrtesit vvkllscfdd lvaagtasgr vavfqlvssl pgrnkqlrrf
      121 dvtgihknsi talawspngm klfsgddkgk ivyssldldq gvcrshllle epasivqldy
      181 sqkvllvstl qrsllfhtee rsvqqvgaqp rrstgkfgac fipglckqsd ltlyasrpgl
      241 rlwkadihgt vqatfilkdv faggvkpfel yprldsaarg gcsspekhlg lvscffqegw
      301 vlswneysiy lldtvnqati aglegsgdiv svscteneif flkgdrniir issrpeglas
      361 ivkpaslpvr dgletsacse qvhgpraekl paatpsetrl rgssvassva seprsrsssl
      421 nstdsgsgpq tapelgrggp ltskrfsvis sedfdqelvv kplrvkkkkr tkktveggss
      481 ttgpsslest pgcecpgdsp qsvsmdlpsv asslgsivdr sstgspdqes slsgeaagvl
      541 peysdpeafs vlevplpapd llnrggdrra eiplddgegg telpagvvss swhppelveg
      601 sediveleee prpadggpgg aaearrerav qpdgpqgafs eacildsapv pshlswapsa
      661 eqqlpgatad egraeeppee qgflthvgap hhlslspwhg apdadtgqta vvtserdlgg
      721 ggqpppwasa saagaqeqtp rdqvltssde ediyghglps sssetsvtel gggrslqdlr
      781 qlgaddpgll kadqfaeswm gysgpghgil slavsekylw cldykgglfc salpgaglrw
      841 qkfedavqqv avspsgallw kieqksnraf acgkvtikgk rhwyealpqa vfvalsddta
      901 wiirtngdly lqtglsvdrp caravkvdcp fplsqvtarn svvwalteqr allyregvss
      961 fcpegeqwkc divserqale pvcitlgdqq slwaldirgn lwfrtgvvsk kpqgddghww
     1021 qgrqtreaaq sesvqqpelp sqegfpetwg kasfrkvrgt rlepeprcap hvqdrprlcc
     1081 csgrvtnsas evraslvpqm vkhlpaeqem gltpgsersp geawlptpvs flvvpglhcc
     1141 tgfslvaesr lliavaslvv erglsvhrpq
//
LOCUS       XP_061015456             318 aa            linear   MAM 02-DEC-2023
DEFINITION  ankyrin repeat domain-containing protein 9 isoform X1 [Dama dama].
ACCESSION   XP_061015456
VERSION     XP_061015456.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159473.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..318
                     /product="ankyrin repeat domain-containing protein 9
                     isoform X1"
                     /calculated_mol_wt=34355
     Region          <75..206
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          <157..198
                     /region_name="Ank_5"
                     /note="Ankyrin repeats (many copies); pfam13857"
                     /db_xref="CDD:433530"
     Region          158..189
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..318
                     /gene="ANKRD9"
                     /coded_by="XM_061159473.1:331..1287"
                     /db_xref="GeneID:133068258"
ORIGIN      
        1 mpwdarlpgg gaeggpegag aarsraqkqc rkssfafyqa vrdllpvwll edmraseafh
       61 wdergraaay spseallyal vhdhqayahy llatfprral appsagfrcc aapgphvala
      121 vrynrvgilr rilrtvrdfp aeerarlldr rgcsrveggg talhvacelv rpeclflllg
      181 hgaspglrdg sgltplelll rqlgrdagaa tsaasgapap ppgeprqrrl llldllalyt
      241 padaagparr ellgdrprwr rllgeekfqw laglappslf aramqvlvta ispgrfpeal
      301 delplppflq pldltgkg
//
LOCUS       XP_061015457             266 aa            linear   MAM 02-DEC-2023
DEFINITION  ankyrin repeat domain-containing protein 9 isoform X2 [Dama dama].
ACCESSION   XP_061015457
VERSION     XP_061015457.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159474.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..266
                     /product="ankyrin repeat domain-containing protein 9
                     isoform X2"
                     /calculated_mol_wt=28754
     Region          <105..146
                     /region_name="Ank_5"
                     /note="Ankyrin repeats (many copies); pfam13857"
                     /db_xref="CDD:433530"
     Region          106..137
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..266
                     /gene="ANKRD9"
                     /coded_by="XM_061159474.1:351..1151"
                     /db_xref="GeneID:133068258"
ORIGIN      
        1 mraseafhwd ergraaaysp seallyalvh dhqayahyll atfprralap psagfrccaa
       61 pgphvalavr ynrvgilrri lrtvrdfpae erarlldrrg csrvegggta lhvacelvrp
      121 eclflllghg aspglrdgsg ltplelllrq lgrdagaats aasgapappp geprqrrlll
      181 ldllalytpa daagparrel lgdrprwrrl lgeekfqwla glappslfar amqvlvtais
      241 pgrfpealde lplppflqpl dltgkg
//
LOCUS       XP_061015458             266 aa            linear   MAM 02-DEC-2023
DEFINITION  ankyrin repeat domain-containing protein 9 isoform X2 [Dama dama].
ACCESSION   XP_061015458
VERSION     XP_061015458.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159475.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..266
                     /product="ankyrin repeat domain-containing protein 9
                     isoform X2"
                     /calculated_mol_wt=28754
     Region          <105..146
                     /region_name="Ank_5"
                     /note="Ankyrin repeats (many copies); pfam13857"
                     /db_xref="CDD:433530"
     Region          106..137
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..266
                     /gene="ANKRD9"
                     /coded_by="XM_061159475.1:320..1120"
                     /db_xref="GeneID:133068258"
ORIGIN      
        1 mraseafhwd ergraaaysp seallyalvh dhqayahyll atfprralap psagfrccaa
       61 pgphvalavr ynrvgilrri lrtvrdfpae erarlldrrg csrvegggta lhvacelvrp
      121 eclflllghg aspglrdgsg ltplelllrq lgrdagaats aasgapappp geprqrrlll
      181 ldllalytpa daagparrel lgdrprwrrl lgeekfqwla glappslfar amqvlvtais
      241 pgrfpealde lplppflqpl dltgkg
//
LOCUS       XP_061015459             264 aa            linear   MAM 02-DEC-2023
DEFINITION  small ribosomal subunit protein eS1-like [Dama dama].
ACCESSION   XP_061015459
VERSION     XP_061015459.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159476.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..264
                     /product="small ribosomal subunit protein eS1-like"
                     /calculated_mol_wt=29848
     Region          21..221
                     /region_name="Ribosomal_S3Ae"
                     /note="Ribosomal S3Ae family; pfam01015"
                     /db_xref="CDD:425987"
     CDS             1..264
                     /gene="LOC133068260"
                     /coded_by="XM_061159476.1:24..818"
                     /db_xref="GeneID:133068260"
ORIGIN      
        1 mavgknkrlt kggkkgakkk vvdpfskkdw ydvkapamfn irnigktlvt rtqgtkiasd
       61 glkgrvfevs ladlqndeva frkfklited vqgkncltnf hgmdltrdkm csmvkkwqtm
      121 ieahvdvktt dgyllrlfcv gftkkrnnqi rktsyaqhqq vrqirkkmme imtrevqtnd
      181 lkevvnklip dsigkdieka cqsiyplhdv fvrkvkmlkk pkfelgkfme lhgegsssgk
      241 atgdetgakv eradgyeppv qesv
//
LOCUS       XP_061015460             483 aa            linear   MAM 02-DEC-2023
DEFINITION  REST corepressor 1 [Dama dama].
ACCESSION   XP_061015460
VERSION     XP_061015460.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159477.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..483
                     /product="REST corepressor 1"
                     /calculated_mol_wt=53013
     Region          103..156
                     /region_name="ELM2"
                     /note="ELM2 domain; pfam01448"
                     /db_xref="CDD:460214"
     Region          192..236
                     /region_name="SANT"
                     /note="'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains.
                     Tandem copies of the domain bind telomeric DNA tandem
                     repeatsas part of the capping complex. Binding is sequence
                     dependent for repeats which contain the G/C rich motif
                     [C2-3 A (CA)1-6]. The domain is...; cl21498"
                     /db_xref="CDD:473887"
     Site            order(193,222..223,225..226,228..230,232..234)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212559"
     Region          383..426
                     /region_name="Myb_DNA-binding"
                     /note="Myb-like DNA-binding domain; pfam00249"
                     /db_xref="CDD:459731"
     CDS             1..483
                     /gene="RCOR1"
                     /coded_by="XM_061159477.1:36..1487"
                     /db_xref="GeneID:133068261"
ORIGIN      
        1 mpamvekgpe vsgkrrgrnn assaaasaaa aasaaasaaa aasaaaasaa saaasasaaa
       61 apnngqnksl aaaaapngns ssnsweegss gsssdeehgg ggmrvgpqyq avvpdfdpak
      121 larrsqerdn lgmlvwspnq nlseakldey iaiakekhgy nmeqalgmlf whkhnieksl
      181 adlpnftpfp dewtvedkvl feqafsfhgk tfhriqqmlp dksiaslvkf yyswkktrtk
      241 tsvmdrharr qkrereesed eleetngnnp idmeidqnke skkevpptet ipqikkekhs
      301 tqaknrakrk ppkgmflsqe dveavsanat aattvlrqld lelvsikrqi qnikqtnsal
      361 kekldggiep yrlpeviqkc narwtteeql lavqairkyg rdfqaisdvi gnksvvqvkn
      421 ffvnyrrrfn idevlqewea ehgkeengps nqkpvkspds sikmpeedde aasvldvrya
      481 sas
//
LOCUS       XP_061015461             568 aa            linear   MAM 02-DEC-2023
DEFINITION  TNF receptor-associated factor 3 isoform X1 [Dama dama].
ACCESSION   XP_061015461
VERSION     XP_061015461.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159478.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..568
                     /product="TNF receptor-associated factor 3 isoform X1"
                     /calculated_mol_wt=64102
     Region          51..92
                     /region_name="RING-HC_TRAF3"
                     /note="RING finger, HC subclass, found in tumor necrosis
                     factor (TNF) receptor-associated factor 3 (TRAF3) and
                     similar proteins; cd16640"
                     /db_xref="CDD:438302"
     Region          136..192
                     /region_name="zf-TRAF"
                     /note="TRAF-type zinc finger; pfam02176"
                     /db_xref="CDD:280357"
     Region          197..247
                     /region_name="zf-TRAF"
                     /note="TRAF-type zinc finger; pfam02176"
                     /db_xref="CDD:280357"
     Region          <258..>368
                     /region_name="Mplasa_alph_rch"
                     /note="helix-rich Mycoplasma protein; TIGR04523"
                     /db_xref="CDD:275316"
     Region          378..563
                     /region_name="MATH_TRAF3"
                     /note="Tumor Necrosis Factor Receptor (TNFR)-Associated
                     Factor (TRAF) family, TRAF3 subfamily, TRAF domain; TRAF
                     molecules serve as adapter proteins that link TNFRs and
                     downstream kinase cascades resulting in the activation of
                     transcription factors and the...; cd03777"
                     /db_xref="CDD:239746"
     Site            order(399,402,410,412,419,421,449..450,481,484,501)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:239746"
     Site            order(457,459,463,465,474,512,515,520,530..533)
                     /site_type="active"
                     /note="TNFR binding site [active]"
                     /db_xref="CDD:239746"
     CDS             1..568
                     /gene="TRAF3"
                     /coded_by="XM_061159478.1:237..1943"
                     /db_xref="GeneID:133068262"
ORIGIN      
        1 mepskkldaa salpanpplk lhpergggpa vlvpeqggyk erfvkavedk ykcekcrlvl
       61 cspkqtecgh rfcetcmgal lsssspkcta cqeviikdkv fkdncckrei lalqifcrne
      121 grgcaeqlal ghllvhlknd cqfeelscvr adckekvlrk dlrdhvekac kyreatcshc
      181 ksqvpmitlq khedtecpcv vvscphkcsv qtllrselsa hlsecvnaps tcsfkrygci
      241 fqgtnqqika heassavqhv nllkewsnsl ekkvsllqne sveknksiqs lhnqicsfei
      301 eierqkemlr nneskilhlq rvidsqaekl keldkeirpf rqnweeadsm kssveslqnr
      361 vtelesvdks agqaarntgl lesqlsrhdq mlsvhdirla dmdlrfqvle tasyngvliw
      421 kirdykrrkq eavmgktlsl ysqpfytgyf gykmcarvyl ngdgmgkgth lslffvimrg
      481 eydallpwpf kqkvtlmlmd qgssrrhlgd afkpdpnsss fkkptgemni asgcpvfvaq
      541 tvlengtyik ddtifikviv dtsdlpdp
//
LOCUS       XP_061015462             568 aa            linear   MAM 02-DEC-2023
DEFINITION  TNF receptor-associated factor 3 isoform X1 [Dama dama].
ACCESSION   XP_061015462
VERSION     XP_061015462.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159479.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..568
                     /product="TNF receptor-associated factor 3 isoform X1"
                     /calculated_mol_wt=64102
     Region          51..92
                     /region_name="RING-HC_TRAF3"
                     /note="RING finger, HC subclass, found in tumor necrosis
                     factor (TNF) receptor-associated factor 3 (TRAF3) and
                     similar proteins; cd16640"
                     /db_xref="CDD:438302"
     Region          136..192
                     /region_name="zf-TRAF"
                     /note="TRAF-type zinc finger; pfam02176"
                     /db_xref="CDD:280357"
     Region          197..247
                     /region_name="zf-TRAF"
                     /note="TRAF-type zinc finger; pfam02176"
                     /db_xref="CDD:280357"
     Region          <258..>368
                     /region_name="Mplasa_alph_rch"
                     /note="helix-rich Mycoplasma protein; TIGR04523"
                     /db_xref="CDD:275316"
     Region          378..563
                     /region_name="MATH_TRAF3"
                     /note="Tumor Necrosis Factor Receptor (TNFR)-Associated
                     Factor (TRAF) family, TRAF3 subfamily, TRAF domain; TRAF
                     molecules serve as adapter proteins that link TNFRs and
                     downstream kinase cascades resulting in the activation of
                     transcription factors and the...; cd03777"
                     /db_xref="CDD:239746"
     Site            order(399,402,410,412,419,421,449..450,481,484,501)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:239746"
     Site            order(457,459,463,465,474,512,515,520,530..533)
                     /site_type="active"
                     /note="TNFR binding site [active]"
                     /db_xref="CDD:239746"
     CDS             1..568
                     /gene="TRAF3"
                     /coded_by="XM_061159479.1:367..2073"
                     /db_xref="GeneID:133068262"
ORIGIN      
        1 mepskkldaa salpanpplk lhpergggpa vlvpeqggyk erfvkavedk ykcekcrlvl
       61 cspkqtecgh rfcetcmgal lsssspkcta cqeviikdkv fkdncckrei lalqifcrne
      121 grgcaeqlal ghllvhlknd cqfeelscvr adckekvlrk dlrdhvekac kyreatcshc
      181 ksqvpmitlq khedtecpcv vvscphkcsv qtllrselsa hlsecvnaps tcsfkrygci
      241 fqgtnqqika heassavqhv nllkewsnsl ekkvsllqne sveknksiqs lhnqicsfei
      301 eierqkemlr nneskilhlq rvidsqaekl keldkeirpf rqnweeadsm kssveslqnr
      361 vtelesvdks agqaarntgl lesqlsrhdq mlsvhdirla dmdlrfqvle tasyngvliw
      421 kirdykrrkq eavmgktlsl ysqpfytgyf gykmcarvyl ngdgmgkgth lslffvimrg
      481 eydallpwpf kqkvtlmlmd qgssrrhlgd afkpdpnsss fkkptgemni asgcpvfvaq
      541 tvlengtyik ddtifikviv dtsdlpdp
//
LOCUS       XP_061015463             568 aa            linear   MAM 02-DEC-2023
DEFINITION  TNF receptor-associated factor 3 isoform X1 [Dama dama].
ACCESSION   XP_061015463
VERSION     XP_061015463.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159480.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..568
                     /product="TNF receptor-associated factor 3 isoform X1"
                     /calculated_mol_wt=64102
     Region          51..92
                     /region_name="RING-HC_TRAF3"
                     /note="RING finger, HC subclass, found in tumor necrosis
                     factor (TNF) receptor-associated factor 3 (TRAF3) and
                     similar proteins; cd16640"
                     /db_xref="CDD:438302"
     Region          136..192
                     /region_name="zf-TRAF"
                     /note="TRAF-type zinc finger; pfam02176"
                     /db_xref="CDD:280357"
     Region          197..247
                     /region_name="zf-TRAF"
                     /note="TRAF-type zinc finger; pfam02176"
                     /db_xref="CDD:280357"
     Region          <258..>368
                     /region_name="Mplasa_alph_rch"
                     /note="helix-rich Mycoplasma protein; TIGR04523"
                     /db_xref="CDD:275316"
     Region          378..563
                     /region_name="MATH_TRAF3"
                     /note="Tumor Necrosis Factor Receptor (TNFR)-Associated
                     Factor (TRAF) family, TRAF3 subfamily, TRAF domain; TRAF
                     molecules serve as adapter proteins that link TNFRs and
                     downstream kinase cascades resulting in the activation of
                     transcription factors and the...; cd03777"
                     /db_xref="CDD:239746"
     Site            order(399,402,410,412,419,421,449..450,481,484,501)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:239746"
     Site            order(457,459,463,465,474,512,515,520,530..533)
                     /site_type="active"
                     /note="TNFR binding site [active]"
                     /db_xref="CDD:239746"
     CDS             1..568
                     /gene="TRAF3"
                     /coded_by="XM_061159480.1:147..1853"
                     /db_xref="GeneID:133068262"
ORIGIN      
        1 mepskkldaa salpanpplk lhpergggpa vlvpeqggyk erfvkavedk ykcekcrlvl
       61 cspkqtecgh rfcetcmgal lsssspkcta cqeviikdkv fkdncckrei lalqifcrne
      121 grgcaeqlal ghllvhlknd cqfeelscvr adckekvlrk dlrdhvekac kyreatcshc
      181 ksqvpmitlq khedtecpcv vvscphkcsv qtllrselsa hlsecvnaps tcsfkrygci
      241 fqgtnqqika heassavqhv nllkewsnsl ekkvsllqne sveknksiqs lhnqicsfei
      301 eierqkemlr nneskilhlq rvidsqaekl keldkeirpf rqnweeadsm kssveslqnr
      361 vtelesvdks agqaarntgl lesqlsrhdq mlsvhdirla dmdlrfqvle tasyngvliw
      421 kirdykrrkq eavmgktlsl ysqpfytgyf gykmcarvyl ngdgmgkgth lslffvimrg
      481 eydallpwpf kqkvtlmlmd qgssrrhlgd afkpdpnsss fkkptgemni asgcpvfvaq
      541 tvlengtyik ddtifikviv dtsdlpdp
//
LOCUS       XP_061015464             543 aa            linear   MAM 02-DEC-2023
DEFINITION  TNF receptor-associated factor 3 isoform X2 [Dama dama].
ACCESSION   XP_061015464
VERSION     XP_061015464.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159481.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..543
                     /product="TNF receptor-associated factor 3 isoform X2"
                     /calculated_mol_wt=61358
     Region          51..92
                     /region_name="RING-HC_TRAF3"
                     /note="RING finger, HC subclass, found in tumor necrosis
                     factor (TNF) receptor-associated factor 3 (TRAF3) and
                     similar proteins; cd16640"
                     /db_xref="CDD:438302"
     Region          136..192
                     /region_name="zf-TRAF"
                     /note="TRAF-type zinc finger; pfam02176"
                     /db_xref="CDD:280357"
     Region          <214..>343
                     /region_name="Mplasa_alph_rch"
                     /note="helix-rich Mycoplasma protein; TIGR04523"
                     /db_xref="CDD:275316"
     Region          353..538
                     /region_name="MATH_TRAF3"
                     /note="Tumor Necrosis Factor Receptor (TNFR)-Associated
                     Factor (TRAF) family, TRAF3 subfamily, TRAF domain; TRAF
                     molecules serve as adapter proteins that link TNFRs and
                     downstream kinase cascades resulting in the activation of
                     transcription factors and the...; cd03777"
                     /db_xref="CDD:239746"
     Site            order(374,377,385,387,394,396,424..425,456,459,476)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:239746"
     Site            order(432,434,438,440,449,487,490,495,505..508)
                     /site_type="active"
                     /note="TNFR binding site [active]"
                     /db_xref="CDD:239746"
     CDS             1..543
                     /gene="TRAF3"
                     /coded_by="XM_061159481.1:237..1868"
                     /db_xref="GeneID:133068262"
ORIGIN      
        1 mepskkldaa salpanpplk lhpergggpa vlvpeqggyk erfvkavedk ykcekcrlvl
       61 cspkqtecgh rfcetcmgal lsssspkcta cqeviikdkv fkdncckrei lalqifcrne
      121 grgcaeqlal ghllvhlknd cqfeelscvr adckekvlrk dlrdhvekac kyreatcshc
      181 ksqvpmitlq khedtecpcv vvscphkcsv qtllrsegtn qqikaheass avqhvnllke
      241 wsnslekkvs llqnesvekn ksiqslhnqi csfeieierq kemlrnnesk ilhlqrvids
      301 qaeklkeldk eirpfrqnwe eadsmkssve slqnrvtele svdksagqaa rntgllesql
      361 srhdqmlsvh dirladmdlr fqvletasyn gvliwkirdy krrkqeavmg ktlslysqpf
      421 ytgyfgykmc arvylngdgm gkgthlslff vimrgeydal lpwpfkqkvt lmlmdqgssr
      481 rhlgdafkpd pnsssfkkpt gemniasgcp vfvaqtvlen gtyikddtif ikvivdtsdl
      541 pdp
//
LOCUS       XP_061015465            1712 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase MRCK beta [Dama dama].
ACCESSION   XP_061015465
VERSION     XP_061015465.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159482.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1712
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1712
                     /product="serine/threonine-protein kinase MRCK beta"
                     /calculated_mol_wt=193750
     Region          3..411
                     /region_name="STKc_MRCK_beta"
                     /note="Catalytic domain of the Protein Serine/Threonine
                     Kinase, DMPK-related cell division control protein 42
                     binding kinase (MRCK) beta; cd05624"
                     /db_xref="CDD:270774"
     Site            order(3..4,6..7,10..11,14..15,24..25,27,29..30,33..34,37,
                     46,51..52,55,58,62,65,68..72,75,95,98,100,113,141,393,
                     396..397,399,406..409)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:270774"
     Site            order(82..86,90,103,105,137,153..154,156,160,162,200,202,
                     204..205,207,217..218,221,236..241,273,279,282)
                     /site_type="active"
                     /db_xref="CDD:270774"
     Site            order(82..86,90,103,105,137,154..156,160,200,202,204..205,
                     207,217..218)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270774"
     Site            order(86,160,162,200,202,204,221,236..241,273,279,282)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270774"
     Site            217..241
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270774"
     Site            398..403
                     /site_type="other"
                     /note="hydrophobic motif (HM)"
                     /db_xref="CDD:270774"
     Region          <426..>937
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          527..606
                     /region_name="KELK"
                     /note="KELK-motif containing domain of MRCK Ser/Thr
                     protein kinase; pfam15796"
                     /db_xref="CDD:464876"
     Region          1027..1079
                     /region_name="C1_MRCKbeta"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in myotonic dystrophy kinase-related Cdc42-binding
                     kinase beta (MRCK beta) and similar proteins; cd20865"
                     /db_xref="CDD:410415"
     Site            order(1032..1038,1046..1050,1053)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410415"
     Region          1086..1220
                     /region_name="PH_MRCK"
                     /note="MRCK (myotonic dystrophy-related Cdc42-binding
                     kinase) pleckstrin homology (PH) domain; cd01243"
                     /db_xref="CDD:269949"
     Region          1251..1510
                     /region_name="CNH"
                     /note="CNH domain; pfam00780"
                     /db_xref="CDD:459938"
     CDS             1..1712
                     /gene="CDC42BPB"
                     /coded_by="XM_061159482.1:45..5183"
                     /db_xref="GeneID:133068264"
ORIGIN      
        1 msakvrlkkl eqllldgpwr nesalsvetl ldvlvclyte cshsalrrdk yvaeflewak
       61 pftqlvkemq lhredfeiik vigrgafgev avvkmknter iyamkilnkw emlkraetac
      121 freerdvlvn gdcqwittlh yafqdenyly lvmdyyvggd lltllskfed klpedmarfy
      181 igemvlaids ihqlhyvhrd ikpdnvlldv nghirladfg sclkmnddgt vqssvavgtp
      241 dyispeilqa medgmgkygp ecdwwslgvc myemlygetp fyaeslvety gkimnheerf
      301 qfpshvtdvs eeakdliqrl icsrerrlgq ngvedfkkha ffqglnweni rnleapyipd
      361 vsspsdtsnf dvdddvlrni evlppgshtg fsglhlpfig ftfttescfs drgslkstlq
      421 sstltrdegv qrdleaslqv eayerrirrl eqerlelsrk lqestqtvqs lhgsaralgg
      481 aardkeikrl neeierlknk iadssrlerq ledtvtlrqe hedsaqrlkg lekqyrvvrq
      541 ekedlhkqli easerlksqa relkdahqqr klalqefsel nermaelrsq kqkvsrqlrd
      601 reeeveaamq kidalrqdvr radkgrkele aqledavaea skerklrehs enfskqvese
      661 lealkmkqgg rgpgaalehq qeiskiksel ekkvlfyeee lvrreashvl evknvkkevh
      721 dsesqqlalq kevmvlkdkl eksrrerhse meeavgtvrd kyereramlf eenkkltaen
      781 eklcsfvdkl taqnrqlede lqdlaakkes vahweaqiae iiqwvsdekd argylqalas
      841 kmteeletlr ssslgsrtld plwkvrrsqk ldmsarlelq saleaeirak qlvqeelrkv
      901 kdvnlsfesk lkdseaknre lleemeilkk kmeekfradt glklpdfqds ifeyfntapl
      961 ahdltfrtss tseqetqapk peaslavsvt tgaelqedma rapqrlpatp lptaqtltlt
     1021 gpkpkahqls iksfssptqc shctslmvgl irqgyacdvc sfachvscrd rapqvcpipp
     1081 eqskrplgvd vqrgigtayk gyvkipkpsg vkkgwqrafa vvcdcrlfly dlpegkstqp
     1141 gvlasqvldl rdeefsvssv lasdvihasr rdipcifrvt asllgapskt sslliltene
     1201 nekrkwvgil eglqailqkn rlqnqavhvp qeaydsslpl ikavltaail dgdriaigle
     1261 eglyvievtr dvivrvadyk kvyqielapk ervavllcgr nhhvhlcpws sfdgaesnvd
     1321 iklpetkgcq liatgtlkks gptclfvavk rlvlcyeiqr tkpfhrklse lvapgsvqwm
     1381 avlkdklcvg ypsgfsllst qgdgqalnlv npndpsltfl sqqsfdalca velkseeyll
     1441 cfshmglyvd pqgrrsraqe lmwpaapvac scspthvtvy seygvdvfdv rtmewvqtvg
     1501 lrrirplnle gslnllncep prliyfqska sgavlnvpdt sdnsrkqmlr trskrrfvfk
     1561 vpeeerlqqr remlrdpelr skmisnptnf nhvahmgpgd gmqvlmdlpl savpaaqeer
     1621 pgpapaslsr pppprnkpyv swpssggsep gvavplrsms dpdqdfdkep dsdstkhstp
     1681 snssnpsgpp spnsphrsql plegleqpsc da
//
LOCUS       XP_061015466             467 aa            linear   MAM 02-DEC-2023
DEFINITION  protein amnionless isoform X1 [Dama dama].
ACCESSION   XP_061015466
VERSION     XP_061015466.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159483.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..467
                     /product="protein amnionless isoform X1"
                     /calculated_mol_wt=49435
     Region          22..>341
                     /region_name="Amnionless"
                     /note="pfam14828"
                     /db_xref="CDD:464340"
     CDS             1..467
                     /gene="AMN"
                     /coded_by="XM_061159483.1:47..1450"
                     /db_xref="GeneID:133068265"
ORIGIN      
        1 mgapgrallw lqllaltraa dkvwvpntnf ddatnwsqnr tpcagaavef padktvsvlv
       61 reghsisdml lpldgefvla sgagfgatda gsrpdcgtga rarfldpdrf lwldpllwrp
      121 gdaarglfsv daervpclhd dvvfppdasf rvglgpgagt vrvrsvqalg qtfareedla
      181 aflasragrl rfhgpgalsv dpeactdpsg cvcgnaeaqp wicaallqpl gggcpqaacl
      241 eplrpegqcc dlcgavvslt hgpafdlqry rarllhafla lpqyqglqva vskvprppgl
      301 rkasgakadt eiqvvlveag petggagrla ralladiaqh ggggatrrpp rgpgrrwast
      361 ircstrrtpr rrsrprsrtk gapaaatsli rclakrrprp erprdrpvap rpqphpggia
      421 gpagsptfcw pspikrilap dvsadtsris yarlplpgrs cegqvgw
//
LOCUS       XP_061015469             462 aa            linear   MAM 02-DEC-2023
DEFINITION  protein amnionless isoform X2 [Dama dama].
ACCESSION   XP_061015469
VERSION     XP_061015469.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159486.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..462
                     /product="protein amnionless isoform X2"
                     /calculated_mol_wt=48119
     Region          22..455
                     /region_name="Amnionless"
                     /note="pfam14828"
                     /db_xref="CDD:464340"
     CDS             1..462
                     /gene="AMN"
                     /coded_by="XM_061159486.1:47..1435"
                     /db_xref="GeneID:133068265"
ORIGIN      
        1 mgapgrallw lqllaltraa dkvwvpntnf ddatnwsqnr tpcagaavef padktvsvlv
       61 reghsisdml lpldgefvla sgagfgatda gsrpdcgtga rarfldpdrf lwldpllwrp
      121 gdaarglfsv daervpclhd dvvfppdasf rvglgpgagt vrvrsvqalg qtfareedla
      181 aflasragrl rfhgpgalsv dpeactdpsg cvcgnaeaqp wicaallqpl gggcpqaacl
      241 eplrpegqcc dlcgavvslt hgpafdlqry rarllhafla lpqyqglqva vskvprppgl
      301 rkasgakadt eiqvvlveag petggagrla ralladiaqh gealgilsat aresgapvwg
      361 gsaaglnapa raglagglaa agllvllall agtlllrreg rlrwrrrdea ataragaplg
      421 fhnpvfyaad saealptpks dqrsssrsyf lnplfgeaea ea
//
LOCUS       XP_061015470             452 aa            linear   MAM 02-DEC-2023
DEFINITION  protein amnionless isoform X3 [Dama dama].
ACCESSION   XP_061015470
VERSION     XP_061015470.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159487.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..452
                     /product="protein amnionless isoform X3"
                     /calculated_mol_wt=47803
     Region          55..>326
                     /region_name="Amnionless"
                     /note="pfam14828"
                     /db_xref="CDD:464340"
     CDS             1..452
                     /gene="AMN"
                     /coded_by="XM_061159487.1:147..1505"
                     /db_xref="GeneID:133068265"
ORIGIN      
        1 mpptgartgp haqalllssp rtrrcrswce kvtasqtcvs srvgsspggh wtlwllpldg
       61 efvlasgagf gatdagsrpd cgtgararfl dpdrflwldp llwrpgdaar glfsvdaerv
      121 pclhddvvfp pdasfrvglg pgagtvrvrs vqalgqtfar eedlaaflas ragrlrfhgp
      181 galsvdpeac tdpsgcvcgn aeaqpwicaa llqplgggcp qaacleplrp egqccdlcga
      241 vvslthgpaf dlqryrarll haflalpqyq glqvavskvp rppglrkasg akadteiqvv
      301 lveagpetgg agrlaralla diaqhgggga trrpprgpgr rwastircst rrtprrrsrp
      361 rsrtkgapaa atslirclak rrprperprd rpvaprpqph pggiagpags ptfcwpspik
      421 rilapdvsad tsrisyarlp lpgrscegqv gw
//
LOCUS       XP_061015471             754 aa            linear   MAM 02-DEC-2023
DEFINITION  exocyst complex component 3-like protein 4 isoform X1 [Dama dama].
ACCESSION   XP_061015471
VERSION     XP_061015471.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159488.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..754
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..754
                     /product="exocyst complex component 3-like protein 4
                     isoform X1"
                     /calculated_mol_wt=82568
     Region          212..702
                     /region_name="Sec6"
                     /note="Exocyst complex component Sec6; cl19885"
                     /db_xref="CDD:450399"
     CDS             1..754
                     /gene="EXOC3L4"
                     /coded_by="XM_061159488.1:67..2331"
                     /db_xref="GeneID:133068266"
ORIGIN      
        1 mdcspprrlq flkrlfcscq dislccadse mplpqteasg pelhrpqepv ephtpaqgar
       61 rassedaprd rpegsrpgrg tlrrafsrvs qrasgqaprg dagllrlsgr flfpslrrts
      121 dngpagdqtg atsepgpagd rkgsskakeg vgrrsstgtg peeakgtsva dliskrqlla
      181 afeqlwhlet gllaekasct qqdptdlarr amdvclhydg lteeiraivr etlgpdevda
      241 aalaevarvv laeeeahpkp padgdflrtp rgwrqhweda vrrsaeervr qagaeaapga
      301 adaapdvarl laelgglvrr dlqkvqrevh payaaagfpa wqtylsafhg avarrfqelt
      361 hdarsykqly vlldwatnvy gspdflgsqd qtvpseplpp llapdvwagl eddctsflet
      421 eiascfdril qleqdrwaaa eapdvlqgly rttlssdvcm lvaehakaag aistkleatt
      481 lgicaralgl flprfkkafl esgavsepnl casinaceel rthllakfpe sfgelekplv
      541 aatcafqkql lqglqgdvqp lfrvlctkaw ltqdllkplm dkvvafshll ehmapplaqe
      601 tlqevhryvv reylaqalrp hqrfwgedrl sgskkmrlea qaisntfqel gseakwlgqa
      661 ipcvadimge trkddigrhl etlirsypdi rrdhvlaila lrrlgcrrnq hllrrtqall
      721 raaaqasgsg atggrvlfee iklstsvgmv itci
//
LOCUS       XP_061015472             724 aa            linear   MAM 02-DEC-2023
DEFINITION  exocyst complex component 3-like protein 4 isoform X2 [Dama dama].
ACCESSION   XP_061015472
VERSION     XP_061015472.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159489.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..724
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..724
                     /product="exocyst complex component 3-like protein 4
                     isoform X2"
                     /calculated_mol_wt=79120
     Region          182..672
                     /region_name="Sec6"
                     /note="Exocyst complex component Sec6; cl19885"
                     /db_xref="CDD:450399"
     CDS             1..724
                     /gene="EXOC3L4"
                     /coded_by="XM_061159489.1:176..2350"
                     /db_xref="GeneID:133068266"
ORIGIN      
        1 mplpqteasg pelhrpqepv ephtpaqgar rassedaprd rpegsrpgrg tlrrafsrvs
       61 qrasgqaprg dagllrlsgr flfpslrrts dngpagdqtg atsepgpagd rkgsskakeg
      121 vgrrsstgtg peeakgtsva dliskrqlla afeqlwhlet gllaekasct qqdptdlarr
      181 amdvclhydg lteeiraivr etlgpdevda aalaevarvv laeeeahpkp padgdflrtp
      241 rgwrqhweda vrrsaeervr qagaeaapga adaapdvarl laelgglvrr dlqkvqrevh
      301 payaaagfpa wqtylsafhg avarrfqelt hdarsykqly vlldwatnvy gspdflgsqd
      361 qtvpseplpp llapdvwagl eddctsflet eiascfdril qleqdrwaaa eapdvlqgly
      421 rttlssdvcm lvaehakaag aistkleatt lgicaralgl flprfkkafl esgavsepnl
      481 casinaceel rthllakfpe sfgelekplv aatcafqkql lqglqgdvqp lfrvlctkaw
      541 ltqdllkplm dkvvafshll ehmapplaqe tlqevhryvv reylaqalrp hqrfwgedrl
      601 sgskkmrlea qaisntfqel gseakwlgqa ipcvadimge trkddigrhl etlirsypdi
      661 rrdhvlaila lrrlgcrrnq hllrrtqall raaaqasgsg atggrvlfee iklstsvgmv
      721 itci
//
LOCUS       XP_061015473             377 aa            linear   MAM 02-DEC-2023
DEFINITION  endogenous retrovirus group K member 7 Env polyprotein-like [Dama
            dama].
ACCESSION   XP_061015473
VERSION     XP_061015473.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159490.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..377
                     /product="endogenous retrovirus group K member 7 Env
                     polyprotein-like"
                     /calculated_mol_wt=41862
     Region          <2..>111
                     /region_name="Tra1_ring"
                     /note="Tra1 HEAT repeat ring region; pfam20206"
                     /db_xref="CDD:466357"
     Region          179..365
                     /region_name="Ebola_HIV-1-like_HR1-HR2"
                     /note="heptad repeat 1-heptad repeat 2 region (ectodomain)
                     of the transmembrane subunit of various endogenous
                     retroviruses (ERVs) and infectious retroviruses, including
                     Ebola virus and human immunodeficiency virus type 1
                     (HIV-1); cl02885"
                     /db_xref="CDD:413513"
     Site            order(216..218,220..221,223,224,226..228,230..231,
                     233..234,236,238..240,242,262,284,287..288)
                     /site_type="other"
                     /note="homotrimer interface [polypeptide binding]"
                     /db_xref="CDD:197370"
     Site            order(216..223,224..235,236..242)
                     /site_type="other"
                     /note="HR1"
                     /db_xref="CDD:197370"
     Site            order(237..244,246)
                     /site_type="other"
                     /note="immunosuppressive region"
                     /db_xref="CDD:197370"
     CDS             1..377
                     /gene="LOC133068267"
                     /coded_by="XM_061159490.1:940..2073"
                     /db_xref="GeneID:133068267"
ORIGIN      
        1 mglinkntfc ttlqpwlftm dlnvvehkia vlnalaacny lpqprkkiva alfkalnstn
       61 selqeagkac mkkflkgati kvdqihthvc pllmmlgdyr sltlnvvnrl ssqynicsfv
      121 vlrrptylmv pvsvstywyd iygivvlqql qdfmrsrrfl gllilgisal itaitsvtva
      181 aislthqvrt tqyvndmskd vslglatqei idkklkvdal kkavmhigtk lqalkvklrc
      241 hadyrwicvt plkvnetdyn wektknhisg vwnsssisld ldrlhgqirt tehsrldvpa
      301 agaasdfsnf isaesilstv lsyiaviali liiivvlpci vralrqstrk lateinlavl
      361 knkkggdags hygrahp
//
LOCUS       XP_061015474             698 aa            linear   MAM 02-DEC-2023
DEFINITION  tumor necrosis factor alpha-induced protein 2 [Dama dama].
ACCESSION   XP_061015474
VERSION     XP_061015474.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159491.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..698
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..698
                     /product="tumor necrosis factor alpha-induced protein 2"
                     /calculated_mol_wt=77184
     Region          159..695
                     /region_name="Sec6"
                     /note="Exocyst complex component Sec6; cl19885"
                     /db_xref="CDD:450399"
     CDS             1..698
                     /gene="TNFAIP2"
                     /coded_by="XM_061159491.1:150..2246"
                     /db_xref="GeneID:133068268"
ORIGIN      
        1 mlkmltffqg lpgqqpvsga pdfprspqkl pstseaesea smseassedl vppleaevap
       61 drdeeeagkk kkkskglatm fsvftkgrkk kgqpssaete gesecsprpp gqlptveelk
      121 vdlergrlea agpllalele lqeaaaagra sgeelvrrqs kvealyallr aqvlgllrrp
      181 leaaperlrq alavlaeqer qdraaaaaaa agppgrpgla atrprgwlql wrdgvaqaaa
      241 erlggrpaad aegrteaert flhmgramke dleavverlk plfpadfhvv aayaesyhah
      301 faaqlaaltq felcprdtym llvwvqnlyp ndilnspkla pelqgvrlgt llpptqirll
      361 eatflsneva svreltaral elesnrwtqd vapqrldarc hselaidiiq iisqgyakae
      421 sitldlgaqi kplllvelat flrsyqrafd eflercrqlr nyranviani nnclsfrtsv
      481 eqrwqtppdl rssllsplne lksrgfdtll qslfgglkpl fkrftqtrwa tpqqtleeii
      541 savaermpef selqdcfree llevvhlhlv keyiarlckr rlvlktaeqq qqlaghvqan
      601 aqliqqfctq ngspatwlhh alptlaeiir lqdpsaikie vatyatwypd fskghlsail
      661 aikgnlsssd aksirsildi ntgahepska lfslikvg
//
LOCUS       XP_061015475             698 aa            linear   MAM 02-DEC-2023
DEFINITION  tumor necrosis factor alpha-induced protein 2 [Dama dama].
ACCESSION   XP_061015475
VERSION     XP_061015475.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159492.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..698
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..698
                     /product="tumor necrosis factor alpha-induced protein 2"
                     /calculated_mol_wt=77184
     Region          159..695
                     /region_name="Sec6"
                     /note="Exocyst complex component Sec6; cl19885"
                     /db_xref="CDD:450399"
     CDS             1..698
                     /gene="TNFAIP2"
                     /coded_by="XM_061159492.1:53..2149"
                     /db_xref="GeneID:133068268"
ORIGIN      
        1 mlkmltffqg lpgqqpvsga pdfprspqkl pstseaesea smseassedl vppleaevap
       61 drdeeeagkk kkkskglatm fsvftkgrkk kgqpssaete gesecsprpp gqlptveelk
      121 vdlergrlea agpllalele lqeaaaagra sgeelvrrqs kvealyallr aqvlgllrrp
      181 leaaperlrq alavlaeqer qdraaaaaaa agppgrpgla atrprgwlql wrdgvaqaaa
      241 erlggrpaad aegrteaert flhmgramke dleavverlk plfpadfhvv aayaesyhah
      301 faaqlaaltq felcprdtym llvwvqnlyp ndilnspkla pelqgvrlgt llpptqirll
      361 eatflsneva svreltaral elesnrwtqd vapqrldarc hselaidiiq iisqgyakae
      421 sitldlgaqi kplllvelat flrsyqrafd eflercrqlr nyranviani nnclsfrtsv
      481 eqrwqtppdl rssllsplne lksrgfdtll qslfgglkpl fkrftqtrwa tpqqtleeii
      541 savaermpef selqdcfree llevvhlhlv keyiarlckr rlvlktaeqq qqlaghvqan
      601 aqliqqfctq ngspatwlhh alptlaeiir lqdpsaikie vatyatwypd fskghlsail
      661 aikgnlsssd aksirsildi ntgahepska lfslikvg
//
LOCUS       XP_061015476             200 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-related protein Rap-2a-like [Dama dama].
ACCESSION   XP_061015476
VERSION     XP_061015476.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159493.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..200
                     /product="ras-related protein Rap-2a-like"
                     /calculated_mol_wt=21637
     Region          12..172
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            18..25
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206648"
     Site            order(20..26,68,124..125,127,154..156)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206648"
     Site            43
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            46..48
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            65..68
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            order(67..68,84..85)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     Site            124..127
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            154..156
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     CDS             1..200
                     /gene="LOC133068269"
                     /coded_by="XM_061159493.1:61..663"
                     /db_xref="GeneID:133068269"
ORIGIN      
        1 maglglrpak gyrvvllgsv avgktalatq facgsfpeqc epsveelfsk vievnaapal
       61 leivdtvgae hlvtlkdlyi knsdgfvvly svcseasfea vrplrermgr lrgpkavplv
      121 lvgtkadlda qrqvltaqgr alarewrcpf levtaksklm vdqvftqvvr emealappee
      181 evpavptnaq etwpserfig
//
LOCUS       XP_061015477             430 aa            linear   MAM 02-DEC-2023
DEFINITION  eukaryotic translation initiation factor 5 [Dama dama].
ACCESSION   XP_061015477
VERSION     XP_061015477.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159494.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..430
                     /product="eukaryotic translation initiation factor 5"
                     /calculated_mol_wt=48938
     Region          9..128
                     /region_name="eIF-5_eIF-2B"
                     /note="Domain found in IF2B/IF5; pfam01873"
                     /db_xref="CDD:426485"
     Region          232..382
                     /region_name="W2_eIF5"
                     /note="C-terminal W2 domain of eukaryotic translation
                     initiation factor 5; cd11561"
                     /db_xref="CDD:211399"
     CDS             1..430
                     /gene="EIF5"
                     /coded_by="XM_061159494.1:554..1846"
                     /db_xref="GeneID:133068271"
ORIGIN      
        1 msvnvnrsvs dqfyrykmpr liakvegkgn giktvivnmv dvakalnrpp typtkyfgce
       61 lgaqtqfdvk ndryivngsh eanklqdmld gfikkfvlcp ecenpetdlh vnpkkqtign
      121 sckacgyrgm ldthhklctf ilknppensd sstgkkekek knrkgkdken gsvsssetpp
      181 ppppneispp phaveeeedd dwgedtteea qrrrmdeisd hakvltlsdd lertveervn
      241 ilfdfvkkkk eegiidssdk eivaeaerld vkamgplvlt evlfnekire qikkyrrhfl
      301 rfchnnkkaq ryllhglecv vamhqaqlis kiphilkemy dadlleeevi iswsektskk
      361 yvskelakei rvkaepfikw lkeaeeessg gedddedeni evvysktasv pkveavksdn
      421 kdddididai
//
LOCUS       XP_061015478             753 aa            linear   MAM 02-DEC-2023
DEFINITION  MAP/microtubule affinity-regulating kinase 3 isoform X1 [Dama
            dama].
ACCESSION   XP_061015478
VERSION     XP_061015478.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159495.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..753
                     /product="MAP/microtubule affinity-regulating kinase 3
                     isoform X1"
                     /calculated_mol_wt=84347
     Region          55..307
                     /region_name="STKc_MARK"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     MAP/microtubule affinity-regulating kinases; cd14072"
                     /db_xref="CDD:270974"
     Site            order(62..66,70,83,85,116,132..135,139,141..142,144,
                     177..178,180,182..183,185,195..196,199,212..217,219,
                     249..252,254)
                     /site_type="active"
                     /db_xref="CDD:270974"
     Site            order(62..65,70,83,85,116,132..135,139,182..183,185,
                     195..196)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270974"
     Site            order(66,139,141,177..178,180,182,199,213..217,219)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270974"
     Site            195..217
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270974"
     Region          325..367
                     /region_name="UBA_MARK3_4"
                     /note="UBA domain found in MAP/microtubule
                     affinity-regulating kinase MARK3, MARK4, and similar
                     proteins; cd14407"
                     /db_xref="CDD:270590"
     Region          654..751
                     /region_name="MARK1-3_C"
                     /note="C-terminal, kinase associated domain 1 (KA1), a
                     phospholipid binding domain, of microtubule
                     affinity-regulating kinases 1-3; cd12196"
                     /db_xref="CDD:213381"
     Site            order(656,659,729,731..732)
                     /site_type="other"
                     /note="putative phospholipid binding site [chemical
                     binding]"
                     /db_xref="CDD:213381"
     CDS             1..753
                     /gene="MARK3"
                     /coded_by="XM_061159495.1:134..2395"
                     /db_xref="GeneID:133068272"
ORIGIN      
        1 mstrtplptv nerdtenhts hgdgrqevts rsgrsgarcr nsiascadeq phignyrllk
       61 tigkgnfakv klarhiltgr evaikiidkt qlnptslqkl frevrimkil nhpnivklfe
      121 vietdktlyl imeyasggev fdylvahgrm kekearakfr qivsavqych qkrivhrdlk
      181 aenllldadm nikiadfgfs neftvgskld tfcgsppyaa pelfqgkkyd gpevdvwslg
      241 vilytlvsgs lpfdgqnlke lrervlrgky ripfymstdc enllkrflvl npikrgtleq
      301 imkdrwinag heddelkpfv epeldisdqk ridimvgmgy tqeeiqesls kmkydeitat
      361 ylllgrksse ldasdsssss nlslakvrps sdlnnstgqs phhkvqrsvs ssqkqrrysd
      421 hagpaipsvv aypkrsqtst adsdlkedgv psrkpgasvv ggkgiapasp mlgnasnpnk
      481 adiperkkss tvpssntasg gmtrrntyvc serttadrhs viqngkenst vpdqrapvas
      541 thsisstttp drtrfprgta srstfhgqpr errtatyngp paspslshea tplsqtrsrg
      601 stnlfsklts kltrrnmsfr fikrlpteye rngryegssr nvsaeqkeen keakprslrf
      661 twsmkttssm dpndmmreir kvldanncdy eqrerfllfc vhgdghaenl vqwemevckl
      721 prlslngvrf krisgtsiaf kniaskiane lkl
//
LOCUS       XP_061015479             744 aa            linear   MAM 02-DEC-2023
DEFINITION  MAP/microtubule affinity-regulating kinase 3 isoform X2 [Dama
            dama].
ACCESSION   XP_061015479
VERSION     XP_061015479.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159496.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..744
                     /product="MAP/microtubule affinity-regulating kinase 3
                     isoform X2"
                     /calculated_mol_wt=83166
     Region          55..307
                     /region_name="STKc_MARK"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     MAP/microtubule affinity-regulating kinases; cd14072"
                     /db_xref="CDD:270974"
     Site            order(62..66,70,83,85,116,132..135,139,141..142,144,
                     177..178,180,182..183,185,195..196,199,212..217,219,
                     249..252,254)
                     /site_type="active"
                     /db_xref="CDD:270974"
     Site            order(62..65,70,83,85,116,132..135,139,182..183,185,
                     195..196)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270974"
     Site            order(66,139,141,177..178,180,182,199,213..217,219)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270974"
     Site            195..217
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270974"
     Region          325..367
                     /region_name="UBA_MARK3_4"
                     /note="UBA domain found in MAP/microtubule
                     affinity-regulating kinase MARK3, MARK4, and similar
                     proteins; cd14407"
                     /db_xref="CDD:270590"
     Region          645..742
                     /region_name="MARK1-3_C"
                     /note="C-terminal, kinase associated domain 1 (KA1), a
                     phospholipid binding domain, of microtubule
                     affinity-regulating kinases 1-3; cd12196"
                     /db_xref="CDD:213381"
     Site            order(647,650,720,722..723)
                     /site_type="other"
                     /note="putative phospholipid binding site [chemical
                     binding]"
                     /db_xref="CDD:213381"
     CDS             1..744
                     /gene="MARK3"
                     /coded_by="XM_061159496.1:134..2368"
                     /db_xref="GeneID:133068272"
ORIGIN      
        1 mstrtplptv nerdtenhts hgdgrqevts rsgrsgarcr nsiascadeq phignyrllk
       61 tigkgnfakv klarhiltgr evaikiidkt qlnptslqkl frevrimkil nhpnivklfe
      121 vietdktlyl imeyasggev fdylvahgrm kekearakfr qivsavqych qkrivhrdlk
      181 aenllldadm nikiadfgfs neftvgskld tfcgsppyaa pelfqgkkyd gpevdvwslg
      241 vilytlvsgs lpfdgqnlke lrervlrgky ripfymstdc enllkrflvl npikrgtleq
      301 imkdrwinag heddelkpfv epeldisdqk ridimvgmgy tqeeiqesls kmkydeitat
      361 ylllgrksse ldasdsssss nlslakvrps sdlnnstgqs phhkvqrsvs ssqkqrrysd
      421 hagpaipsvv aypkrsqtst adsdlkedgv psrkpgasvv ggkgiapasp mlgnasnpnk
      481 adiperkkss tvpssntasg gmtrrntyvc serttadrhs viqngkenst vpdqrapvas
      541 thsisstttp drtrfprgta srstfhgqpr errtatyngp paspslshea tplsqtrsrg
      601 stnlfsklts kltrrlptey erngryegss rnvsaeqkee nkeakprslr ftwsmkttss
      661 mdpndmmrei rkvldanncd yeqrerfllf cvhgdghaen lvqwemevck lprlslngvr
      721 fkrisgtsia fkniaskian elkl
//
LOCUS       XP_061015480             738 aa            linear   MAM 02-DEC-2023
DEFINITION  MAP/microtubule affinity-regulating kinase 3 isoform X3 [Dama
            dama].
ACCESSION   XP_061015480
VERSION     XP_061015480.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159497.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..738
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..738
                     /product="MAP/microtubule affinity-regulating kinase 3
                     isoform X3"
                     /calculated_mol_wt=82538
     Region          55..307
                     /region_name="STKc_MARK"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     MAP/microtubule affinity-regulating kinases; cd14072"
                     /db_xref="CDD:270974"
     Site            order(62..66,70,83,85,116,132..135,139,141..142,144,
                     177..178,180,182..183,185,195..196,199,212..217,219,
                     249..252,254)
                     /site_type="active"
                     /db_xref="CDD:270974"
     Site            order(62..65,70,83,85,116,132..135,139,182..183,185,
                     195..196)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270974"
     Site            order(66,139,141,177..178,180,182,199,213..217,219)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270974"
     Site            195..217
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270974"
     Region          325..367
                     /region_name="UBA_MARK3_4"
                     /note="UBA domain found in MAP/microtubule
                     affinity-regulating kinase MARK3, MARK4, and similar
                     proteins; cd14407"
                     /db_xref="CDD:270590"
     Region          639..736
                     /region_name="MARK1-3_C"
                     /note="C-terminal, kinase associated domain 1 (KA1), a
                     phospholipid binding domain, of microtubule
                     affinity-regulating kinases 1-3; cd12196"
                     /db_xref="CDD:213381"
     Site            order(641,644,714,716..717)
                     /site_type="other"
                     /note="putative phospholipid binding site [chemical
                     binding]"
                     /db_xref="CDD:213381"
     CDS             1..738
                     /gene="MARK3"
                     /coded_by="XM_061159497.1:133..2349"
                     /db_xref="GeneID:133068272"
ORIGIN      
        1 mstrtplptv nerdtenhts hgdgrqevts rsgrsgarcr nsiascadeq phignyrllk
       61 tigkgnfakv klarhiltgr evaikiidkt qlnptslqkl frevrimkil nhpnivklfe
      121 vietdktlyl imeyasggev fdylvahgrm kekearakfr qivsavqych qkrivhrdlk
      181 aenllldadm nikiadfgfs neftvgskld tfcgsppyaa pelfqgkkyd gpevdvwslg
      241 vilytlvsgs lpfdgqnlke lrervlrgky ripfymstdc enllkrflvl npikrgtleq
      301 imkdrwinag heddelkpfv epeldisdqk ridimvgmgy tqeeiqesls kmkydeitat
      361 ylllgrksse ldasdsssss nlslakvrps sdlnnstgqs phhkvqrsvs ssqkqrrysd
      421 hagpaipsvv aypkrsqtst adsdlkedgv psrkpgasvv ggkgiapasp mlgnasnpnk
      481 adiperkkss tvpssntasg gmtrrntyvc serttadrhs viqngkenst vpdqrapvas
      541 thsisstttp drtrfprgta srstfhgqpr errtatyngp paspslshea tplsqtrsrg
      601 stnlfsklts kltrrnmsfr fiksrnvsae qkeenkeakp rslrftwsmk ttssmdpndm
      661 mreirkvlda nncdyeqrer fllfcvhgdg haenlvqwem evcklprlsl ngvrfkrisg
      721 tsiafknias kianelkl
//
LOCUS       XP_061015481             737 aa            linear   MAM 02-DEC-2023
DEFINITION  MAP/microtubule affinity-regulating kinase 3 isoform X4 [Dama
            dama].
ACCESSION   XP_061015481
VERSION     XP_061015481.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159498.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..737
                     /product="MAP/microtubule affinity-regulating kinase 3
                     isoform X4"
                     /calculated_mol_wt=82783
     Region          55..307
                     /region_name="STKc_MARK"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     MAP/microtubule affinity-regulating kinases; cd14072"
                     /db_xref="CDD:270974"
     Site            order(62..66,70,83,85,116,132..135,139,141..142,144,
                     177..178,180,182..183,185,195..196,199,212..217,219,
                     249..252,254)
                     /site_type="active"
                     /db_xref="CDD:270974"
     Site            order(62..65,70,83,85,116,132..135,139,182..183,185,
                     195..196)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270974"
     Site            order(66,139,141,177..178,180,182,199,213..217,219)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270974"
     Site            195..217
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270974"
     Region          325..367
                     /region_name="UBA_MARK3_4"
                     /note="UBA domain found in MAP/microtubule
                     affinity-regulating kinase MARK3, MARK4, and similar
                     proteins; cd14407"
                     /db_xref="CDD:270590"
     Region          638..735
                     /region_name="MARK1-3_C"
                     /note="C-terminal, kinase associated domain 1 (KA1), a
                     phospholipid binding domain, of microtubule
                     affinity-regulating kinases 1-3; cd12196"
                     /db_xref="CDD:213381"
     Site            order(640,643,713,715..716)
                     /site_type="other"
                     /note="putative phospholipid binding site [chemical
                     binding]"
                     /db_xref="CDD:213381"
     CDS             1..737
                     /gene="MARK3"
                     /coded_by="XM_061159498.1:135..2348"
                     /db_xref="GeneID:133068272"
ORIGIN      
        1 mstrtplptv nerdtenhts hgdgrqevts rsgrsgarcr nsiascadeq phignyrllk
       61 tigkgnfakv klarhiltgr evaikiidkt qlnptslqkl frevrimkil nhpnivklfe
      121 vietdktlyl imeyasggev fdylvahgrm kekearakfr qivsavqych qkrivhrdlk
      181 aenllldadm nikiadfgfs neftvgskld tfcgsppyaa pelfqgkkyd gpevdvwslg
      241 vilytlvsgs lpfdgqnlke lrervlrgky ripfymstdc enllkrflvl npikrgtleq
      301 imkdrwinag heddelkpfv epeldisdqk ridimvgmgy tqeeiqesls kmkydeitat
      361 ylllgrksse vrpssdlnns tgqsphhkvq rsvsssqkqr rysdhagpai psvvaypkrs
      421 qtstadsdlk edgvpsrkpg asvvggkgia paspmlgnas npnkadiper kksstvpssn
      481 tasggmtrrn tyvcsertta drhsviqngk enstvpdqra pvasthsiss tttpdrtrfp
      541 rgtasrstfh gqprerrtat yngppaspsl sheatplsqt rsrgstnlfs kltskltrrn
      601 msfrfikrlp teyerngrye gssrnvsaeq keenkeakpr slrftwsmkt tssmdpndmm
      661 reirkvldan ncdyeqrerf llfcvhgdgh aenlvqweme vcklprlsln gvrfkrisgt
      721 siafkniask ianelkl
//
LOCUS       XP_061015482             729 aa            linear   MAM 02-DEC-2023
DEFINITION  MAP/microtubule affinity-regulating kinase 3 isoform X5 [Dama
            dama].
ACCESSION   XP_061015482
VERSION     XP_061015482.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159499.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..729
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..729
                     /product="MAP/microtubule affinity-regulating kinase 3
                     isoform X5"
                     /calculated_mol_wt=81357
     Region          55..307
                     /region_name="STKc_MARK"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     MAP/microtubule affinity-regulating kinases; cd14072"
                     /db_xref="CDD:270974"
     Site            order(62..66,70,83,85,116,132..135,139,141..142,144,
                     177..178,180,182..183,185,195..196,199,212..217,219,
                     249..252,254)
                     /site_type="active"
                     /db_xref="CDD:270974"
     Site            order(62..65,70,83,85,116,132..135,139,182..183,185,
                     195..196)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270974"
     Site            order(66,139,141,177..178,180,182,199,213..217,219)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270974"
     Site            195..217
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270974"
     Region          325..367
                     /region_name="UBA_MARK3_4"
                     /note="UBA domain found in MAP/microtubule
                     affinity-regulating kinase MARK3, MARK4, and similar
                     proteins; cd14407"
                     /db_xref="CDD:270590"
     Region          630..727
                     /region_name="MARK1-3_C"
                     /note="C-terminal, kinase associated domain 1 (KA1), a
                     phospholipid binding domain, of microtubule
                     affinity-regulating kinases 1-3; cd12196"
                     /db_xref="CDD:213381"
     Site            order(632,635,705,707..708)
                     /site_type="other"
                     /note="putative phospholipid binding site [chemical
                     binding]"
                     /db_xref="CDD:213381"
     CDS             1..729
                     /gene="MARK3"
                     /coded_by="XM_061159499.1:132..2321"
                     /db_xref="GeneID:133068272"
ORIGIN      
        1 mstrtplptv nerdtenhts hgdgrqevts rsgrsgarcr nsiascadeq phignyrllk
       61 tigkgnfakv klarhiltgr evaikiidkt qlnptslqkl frevrimkil nhpnivklfe
      121 vietdktlyl imeyasggev fdylvahgrm kekearakfr qivsavqych qkrivhrdlk
      181 aenllldadm nikiadfgfs neftvgskld tfcgsppyaa pelfqgkkyd gpevdvwslg
      241 vilytlvsgs lpfdgqnlke lrervlrgky ripfymstdc enllkrflvl npikrgtleq
      301 imkdrwinag heddelkpfv epeldisdqk ridimvgmgy tqeeiqesls kmkydeitat
      361 ylllgrksse ldasdsssss nlslakvrps sdlnnstgqs phhkvqrsvs ssqkqrrysd
      421 hagpaipsvv aypkrsqtst adsdlkedgv psrkpgasvv ggkgiapasp mlgnasnpnk
      481 adiperkkss tvpssntasg gmtrrntyvc serttadrhs viqngkenst vpdqrapvas
      541 thsisstttp drtrfprgta srstfhgqpr errtatyngp paspslshea tplsqtrsrg
      601 stnlfsklts kltrsrnvsa eqkeenkeak prslrftwsm kttssmdpnd mmreirkvld
      661 anncdyeqre rfllfcvhgd ghaenlvqwe mevcklprls lngvrfkris gtsiafknia
      721 skianelkl
//
LOCUS       XP_061015483             713 aa            linear   MAM 02-DEC-2023
DEFINITION  MAP/microtubule affinity-regulating kinase 3 isoform X6 [Dama
            dama].
ACCESSION   XP_061015483
VERSION     XP_061015483.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159500.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..713
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..713
                     /product="MAP/microtubule affinity-regulating kinase 3
                     isoform X6"
                     /calculated_mol_wt=79794
     Region          55..307
                     /region_name="STKc_MARK"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     MAP/microtubule affinity-regulating kinases; cd14072"
                     /db_xref="CDD:270974"
     Site            order(62..66,70,83,85,116,132..135,139,141..142,144,
                     177..178,180,182..183,185,195..196,199,212..217,219,
                     249..252,254)
                     /site_type="active"
                     /db_xref="CDD:270974"
     Site            order(62..65,70,83,85,116,132..135,139,182..183,185,
                     195..196)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270974"
     Site            order(66,139,141,177..178,180,182,199,213..217,219)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270974"
     Site            195..217
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270974"
     Region          325..367
                     /region_name="UBA_MARK3_4"
                     /note="UBA domain found in MAP/microtubule
                     affinity-regulating kinase MARK3, MARK4, and similar
                     proteins; cd14407"
                     /db_xref="CDD:270590"
     Region          614..711
                     /region_name="MARK1-3_C"
                     /note="C-terminal, kinase associated domain 1 (KA1), a
                     phospholipid binding domain, of microtubule
                     affinity-regulating kinases 1-3; cd12196"
                     /db_xref="CDD:213381"
     Site            order(616,619,689,691..692)
                     /site_type="other"
                     /note="putative phospholipid binding site [chemical
                     binding]"
                     /db_xref="CDD:213381"
     CDS             1..713
                     /gene="MARK3"
                     /coded_by="XM_061159500.1:132..2273"
                     /db_xref="GeneID:133068272"
ORIGIN      
        1 mstrtplptv nerdtenhts hgdgrqevts rsgrsgarcr nsiascadeq phignyrllk
       61 tigkgnfakv klarhiltgr evaikiidkt qlnptslqkl frevrimkil nhpnivklfe
      121 vietdktlyl imeyasggev fdylvahgrm kekearakfr qivsavqych qkrivhrdlk
      181 aenllldadm nikiadfgfs neftvgskld tfcgsppyaa pelfqgkkyd gpevdvwslg
      241 vilytlvsgs lpfdgqnlke lrervlrgky ripfymstdc enllkrflvl npikrgtleq
      301 imkdrwinag heddelkpfv epeldisdqk ridimvgmgy tqeeiqesls kmkydeitat
      361 ylllgrksse vrpssdlnns tgqsphhkvq rsvsssqkqr rysdhagpai psvvaypkrs
      421 qtstadsdlk edgvpsrkpg asvvggkgia paspmlgnas npnkadiper kksstvpssn
      481 tasggmtrrn tyvcsertta drhsviqngk enstvpdqra pvasthsiss tttpdrtrfp
      541 rgtasrstfh gqprerrtat yngppaspsl sheatplsqt rsrgstnlfs kltskltrsr
      601 nvsaeqkeen keakprslrf twsmkttssm dpndmmreir kvldanncdy eqrerfllfc
      661 vhgdghaenl vqwemevckl prlslngvrf krisgtsiaf kniaskiane lkl
//
LOCUS       XP_061015484             798 aa            linear   MAM 02-DEC-2023
DEFINITION  MAP/microtubule affinity-regulating kinase 3 isoform X7 [Dama
            dama].
ACCESSION   XP_061015484
VERSION     XP_061015484.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159501.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..798
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..798
                     /product="MAP/microtubule affinity-regulating kinase 3
                     isoform X7"
                     /calculated_mol_wt=88997
     Region          55..307
                     /region_name="STKc_MARK"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     MAP/microtubule affinity-regulating kinases; cd14072"
                     /db_xref="CDD:270974"
     Site            order(62..66,70,83,85,116,132..135,139,141..142,144,
                     177..178,180,182..183,185,195..196,199,212..217,219,
                     249..252,254)
                     /site_type="active"
                     /db_xref="CDD:270974"
     Site            order(62..65,70,83,85,116,132..135,139,182..183,185,
                     195..196)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270974"
     Site            order(66,139,141,177..178,180,182,199,213..217,219)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270974"
     Site            195..217
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270974"
     Region          325..367
                     /region_name="UBA_MARK3_4"
                     /note="UBA domain found in MAP/microtubule
                     affinity-regulating kinase MARK3, MARK4, and similar
                     proteins; cd14407"
                     /db_xref="CDD:270590"
     Region          699..796
                     /region_name="MARK1-3_C"
                     /note="C-terminal, kinase associated domain 1 (KA1), a
                     phospholipid binding domain, of microtubule
                     affinity-regulating kinases 1-3; cd12196"
                     /db_xref="CDD:213381"
     Site            order(701,704,774,776..777)
                     /site_type="other"
                     /note="putative phospholipid binding site [chemical
                     binding]"
                     /db_xref="CDD:213381"
     CDS             1..798
                     /gene="MARK3"
                     /coded_by="XM_061159501.1:138..2534"
                     /db_xref="GeneID:133068272"
ORIGIN      
        1 mstrtplptv nerdtenhts hgdgrqevts rsgrsgarcr nsiascadeq phignyrllk
       61 tigkgnfakv klarhiltgr evaikiidkt qlnptslqkl frevrimkil nhpnivklfe
      121 vietdktlyl imeyasggev fdylvahgrm kekearakfr qivsavqych qkrivhrdlk
      181 aenllldadm nikiadfgfs neftvgskld tfcgsppyaa pelfqgkkyd gpevdvwslg
      241 vilytlvsgs lpfdgqnlke lrervlrgky ripfymstdc enllkrflvl npikrgtleq
      301 imkdrwinag heddelkpfv epeldisdqk ridimvgmgy tqeeiqesls kmkydeitat
      361 ylllgrksse ldasdsssss nlslakvrps sdlnnstgqs phhkvqrsvs ssqkqrrysd
      421 hagpaipsvv aypkrsqtst adsdlkedgv psrkpgasvv ggkgiapasp mlgnasnpnk
      481 adiperkkss tvpssntasg gmtrrntyvc serttadrhs viqngkensl temfayaasp
      541 asvcktsstc rlrhqksmsm sasghpkmml ppidsegdnf kaitvpdqra pvasthsiss
      601 tttpdrtrfp rgtasrstfh gqprerrtat yngppaspsl sheatplsqt rsrgstnlfs
      661 kltskltrrl pteyerngry egssrnvsae qkeenkeakp rslrftwsmk ttssmdpndm
      721 mreirkvlda nncdyeqrer fllfcvhgdg haenlvqwem evcklprlsl ngvrfkrisg
      781 tsiafknias kianelkl
//
LOCUS       XP_061015485             381 aa            linear   MAM 02-DEC-2023
DEFINITION  creatine kinase B-type [Dama dama].
ACCESSION   XP_061015485
VERSION     XP_061015485.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159502.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..381
                     /product="creatine kinase B-type"
                     /calculated_mol_wt=42530
     Region          16..373
                     /region_name="creatine_kinase_like"
                     /note="Phosphagen (guanidino) kinases such as creatine
                     kinase and similar enzymes; cd00716"
                     /db_xref="CDD:153076"
     Site            order(72,201,232,283,285)
                     /site_type="other"
                     /note="creatine binding site [chemical binding]"
                     /db_xref="CDD:153076"
     Site            order(128,130,132,191,228,236,292,294..296,320,322,
                     324..325,335)
                     /site_type="other"
                     /note="ADP binding site [chemical binding]"
                     /db_xref="CDD:153076"
     Site            order(317..326,329..338)
                     /site_type="active"
                     /note="substrate specificity loop [active]"
                     /db_xref="CDD:153076"
     CDS             1..381
                     /gene="CKB"
                     /coded_by="XM_061159502.1:128..1273"
                     /db_xref="GeneID:133068273"
ORIGIN      
        1 mpfsnshntl klrfpaedef pdlsghnnhm akvltpelya elrakstpsg ftvddviqtg
       61 vdnpghpyim tvgcvagdee sydvfkelfd piiedrhggy kptdehktdl npdnlqggdd
      121 ldpnyvlssr vrtgrsirgf clpphcsrge rraieklave alssldgdla gryyalksmt
      181 aaeqqqlidd hflfdkpvsp lllasgmard wpdargiwhn dnktflvwin eedhlrvism
      241 qkggnmkevf trfcngltqi etlfksknye fmwnphlgyi ltcpsnlgtg lragvhiklp
      301 hlgkhekfpe vlkrlrlqkr gtggvdtaav ggvfdvsnad rlgfsevelv qmvvdgvkll
      361 iemeqrleqg qaiddlmpaq k
//
LOCUS       XP_061015486             285 aa            linear   MAM 02-DEC-2023
DEFINITION  tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A
            isoform X1 [Dama dama].
ACCESSION   XP_061015486
VERSION     XP_061015486.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159503.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..285
                     /product="tRNA (adenine(58)-N(1))-methyltransferase
                     catalytic subunit TRMT61A isoform X1"
                     /calculated_mol_wt=30866
     Region          <23..58
                     /region_name="GCD14_N"
                     /note="tRNA methyltransferase complex GCD14 subunit
                     N-term; pfam14801"
                     /db_xref="CDD:434222"
     Region          64..282
                     /region_name="GCD14"
                     /note="tRNA methyltransferase complex GCD14 subunit;
                     pfam08704"
                     /db_xref="CDD:312288"
     CDS             1..285
                     /gene="TRMT61A"
                     /coded_by="XM_061159503.1:405..1262"
                     /db_xref="GeneID:133068274"
ORIGIN      
        1 msfvayeeli kegdtailsl ghgamvavrv qrgaqtqtrh gvlrhsvdli grpfgskvtc
       61 grggwvyvlh ptpelwtlnl phrtqilyst dialltmmle lrpgsvvces gtgsgsvsha
      121 iirtiaptgh lhtvefhqqr aekareefqe hrvgrwvtvr nqdvcrsgfg vshmadavfl
      181 dipspweavg hawdalkveg grfcsfspci eqvqrtcqal aacgfselst levlpqvynv
      241 rtislpapdl gaspgpdagp frsgtpmket vghtgyltfa tktpg
//
LOCUS       XP_061015487             285 aa            linear   MAM 02-DEC-2023
DEFINITION  tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A
            isoform X1 [Dama dama].
ACCESSION   XP_061015487
VERSION     XP_061015487.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159504.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..285
                     /product="tRNA (adenine(58)-N(1))-methyltransferase
                     catalytic subunit TRMT61A isoform X1"
                     /calculated_mol_wt=30866
     Region          <23..58
                     /region_name="GCD14_N"
                     /note="tRNA methyltransferase complex GCD14 subunit
                     N-term; pfam14801"
                     /db_xref="CDD:434222"
     Region          64..282
                     /region_name="GCD14"
                     /note="tRNA methyltransferase complex GCD14 subunit;
                     pfam08704"
                     /db_xref="CDD:312288"
     CDS             1..285
                     /gene="TRMT61A"
                     /coded_by="XM_061159504.1:116..973"
                     /db_xref="GeneID:133068274"
ORIGIN      
        1 msfvayeeli kegdtailsl ghgamvavrv qrgaqtqtrh gvlrhsvdli grpfgskvtc
       61 grggwvyvlh ptpelwtlnl phrtqilyst dialltmmle lrpgsvvces gtgsgsvsha
      121 iirtiaptgh lhtvefhqqr aekareefqe hrvgrwvtvr nqdvcrsgfg vshmadavfl
      181 dipspweavg hawdalkveg grfcsfspci eqvqrtcqal aacgfselst levlpqvynv
      241 rtislpapdl gaspgpdagp frsgtpmket vghtgyltfa tktpg
//
LOCUS       XP_061015488             285 aa            linear   MAM 02-DEC-2023
DEFINITION  tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A
            isoform X1 [Dama dama].
ACCESSION   XP_061015488
VERSION     XP_061015488.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159505.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..285
                     /product="tRNA (adenine(58)-N(1))-methyltransferase
                     catalytic subunit TRMT61A isoform X1"
                     /calculated_mol_wt=30866
     Region          <23..58
                     /region_name="GCD14_N"
                     /note="tRNA methyltransferase complex GCD14 subunit
                     N-term; pfam14801"
                     /db_xref="CDD:434222"
     Region          64..282
                     /region_name="GCD14"
                     /note="tRNA methyltransferase complex GCD14 subunit;
                     pfam08704"
                     /db_xref="CDD:312288"
     CDS             1..285
                     /gene="TRMT61A"
                     /coded_by="XM_061159505.1:145..1002"
                     /db_xref="GeneID:133068274"
ORIGIN      
        1 msfvayeeli kegdtailsl ghgamvavrv qrgaqtqtrh gvlrhsvdli grpfgskvtc
       61 grggwvyvlh ptpelwtlnl phrtqilyst dialltmmle lrpgsvvces gtgsgsvsha
      121 iirtiaptgh lhtvefhqqr aekareefqe hrvgrwvtvr nqdvcrsgfg vshmadavfl
      181 dipspweavg hawdalkveg grfcsfspci eqvqrtcqal aacgfselst levlpqvynv
      241 rtislpapdl gaspgpdagp frsgtpmket vghtgyltfa tktpg
//
LOCUS       XP_061015489             285 aa            linear   MAM 02-DEC-2023
DEFINITION  tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A
            isoform X1 [Dama dama].
ACCESSION   XP_061015489
VERSION     XP_061015489.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159506.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..285
                     /product="tRNA (adenine(58)-N(1))-methyltransferase
                     catalytic subunit TRMT61A isoform X1"
                     /calculated_mol_wt=30866
     Region          <23..58
                     /region_name="GCD14_N"
                     /note="tRNA methyltransferase complex GCD14 subunit
                     N-term; pfam14801"
                     /db_xref="CDD:434222"
     Region          64..282
                     /region_name="GCD14"
                     /note="tRNA methyltransferase complex GCD14 subunit;
                     pfam08704"
                     /db_xref="CDD:312288"
     CDS             1..285
                     /gene="TRMT61A"
                     /coded_by="XM_061159506.1:162..1019"
                     /db_xref="GeneID:133068274"
ORIGIN      
        1 msfvayeeli kegdtailsl ghgamvavrv qrgaqtqtrh gvlrhsvdli grpfgskvtc
       61 grggwvyvlh ptpelwtlnl phrtqilyst dialltmmle lrpgsvvces gtgsgsvsha
      121 iirtiaptgh lhtvefhqqr aekareefqe hrvgrwvtvr nqdvcrsgfg vshmadavfl
      181 dipspweavg hawdalkveg grfcsfspci eqvqrtcqal aacgfselst levlpqvynv
      241 rtislpapdl gaspgpdagp frsgtpmket vghtgyltfa tktpg
//
LOCUS       XP_061015490             257 aa            linear   MAM 02-DEC-2023
DEFINITION  tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A
            isoform X2 [Dama dama].
ACCESSION   XP_061015490
VERSION     XP_061015490.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159507.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..257
                     /product="tRNA (adenine(58)-N(1))-methyltransferase
                     catalytic subunit TRMT61A isoform X2"
                     /calculated_mol_wt=27653
     Region          <23..56
                     /region_name="GCD14_N"
                     /note="tRNA methyltransferase complex GCD14 subunit
                     N-term; pfam14801"
                     /db_xref="CDD:434222"
     Region          53..254
                     /region_name="GCD14"
                     /note="tRNA methyltransferase complex GCD14 subunit;
                     pfam08704"
                     /db_xref="CDD:312288"
     CDS             1..257
                     /gene="TRMT61A"
                     /coded_by="XM_061159507.1:408..1181"
                     /db_xref="GeneID:133068274"
ORIGIN      
        1 msfvayeeli kegdtailsl ghgamvavrv qrgaqtqtrh gvlrhsvdli grpfgskily
       61 stdialltmm lelrpgsvvc esgtgsgsvs haiirtiapt ghlhtvefhq qraekareef
      121 qehrvgrwvt vrnqdvcrsg fgvshmadav fldipspwea vghawdalkv eggrfcsfsp
      181 cieqvqrtcq alaacgfsel stlevlpqvy nvrtislpap dlgaspgpda gpfrsgtpmk
      241 etvghtgylt fatktpg
//
LOCUS       XP_061015491             447 aa            linear   MAM 02-DEC-2023
DEFINITION  BAG family molecular chaperone regulator 5 [Dama dama].
ACCESSION   XP_061015491
VERSION     XP_061015491.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159508.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..447
                     /product="BAG family molecular chaperone regulator 5"
                     /calculated_mol_wt=50940
     Region          9..86
                     /region_name="BAG"
                     /note="BAG domains, present in regulator of Hsp70
                     proteins; smart00264"
                     /db_xref="CDD:214591"
     Region          182..260
                     /region_name="BAG"
                     /note="BAG domains, present in regulator of Hsp70
                     proteins; smart00264"
                     /db_xref="CDD:214591"
     Region          275..350
                     /region_name="BAG"
                     /note="BAG domains, present in regulator of Hsp70
                     proteins; smart00264"
                     /db_xref="CDD:214591"
     Region          365..442
                     /region_name="BAG"
                     /note="BAG domains, present in regulator of Hsp70
                     proteins; smart00264"
                     /db_xref="CDD:214591"
     CDS             1..447
                     /gene="BAG5"
                     /coded_by="XM_061159508.1:290..1633"
                     /db_xref="GeneID:133068276"
ORIGIN      
        1 memgnqhpsi srlqeiqkev ksieqqvlgf sglsddknyk kleriltkql feidsvdteg
       61 kgdiqqarkr aaqeterllk eleqnanhph rleiqnifqe aqalvkekvv pfysggncvt
      121 defeegiqdv ilrlthvktg gkvslrkary htltkicavq eiiencmkkq pslplsedah
      181 psvakinsvm cevnktrgtl iallmgvnnk etcrhlscvl sglmadldal dvcghteirn
      241 yrkevvedin qllryldlee eadttyafdl rqnhsilkie kvlkrmreik tellqaqnps
      301 elylsaktel qgligqldev sleknpcire arrravievq tlityidlke alekrkllac
      361 eehpshravw dvlgnlseiq gevlsfdgnr tdknyirlee lltkqllald avdpqgeekc
      421 kaarkqavkl aqnilsyldl ksdewey
//
LOCUS       XP_061015492             425 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133068277 [Dama dama].
ACCESSION   XP_061015492
VERSION     XP_061015492.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159509.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..425
                     /product="uncharacterized protein LOC133068277"
                     /calculated_mol_wt=45347
     CDS             1..425
                     /gene="LOC133068277"
                     /coded_by="XM_061159509.1:4472..5749"
                     /db_xref="GeneID:133068277"
ORIGIN      
        1 mgdatgwlra segqnpvqga atccaqtalp ssstppvlga agdagggrpl aspwrtagah
       61 plrlpapcpr pacpshscra prlvsadphw lclgcppfsa lrdpihpsrp sqtvtfpgaf
      121 svplllgrrl fplfpwlasm hwlissvfpt pttsqaslga sgdkravapp lwagflrwgg
      181 rvprsgsalh tlvidpwrrk klggqtewaf pqgppgslsw grqwgrlaed lvdggfeeqq
      241 gpeseerglh agrgvqvarg plvrlagtwp lspvwgwprs ccaaqrwprp scfskavpgd
      301 clpgsvcvsp kswwagsvsv tlhsgdsast wrwypsgagg ltfhvgarct vqelgpskpe
      361 cppprgclps prapvcwavl rhrsptahpg rlwplfcvaw qvwwacggag epqewaprwa
      421 sppvr
//
LOCUS       XP_061015493             425 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133068277 [Dama dama].
ACCESSION   XP_061015493
VERSION     XP_061015493.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159510.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..425
                     /product="uncharacterized protein LOC133068277"
                     /calculated_mol_wt=45347
     CDS             1..425
                     /gene="LOC133068277"
                     /coded_by="XM_061159510.1:4375..5652"
                     /db_xref="GeneID:133068277"
ORIGIN      
        1 mgdatgwlra segqnpvqga atccaqtalp ssstppvlga agdagggrpl aspwrtagah
       61 plrlpapcpr pacpshscra prlvsadphw lclgcppfsa lrdpihpsrp sqtvtfpgaf
      121 svplllgrrl fplfpwlasm hwlissvfpt pttsqaslga sgdkravapp lwagflrwgg
      181 rvprsgsalh tlvidpwrrk klggqtewaf pqgppgslsw grqwgrlaed lvdggfeeqq
      241 gpeseerglh agrgvqvarg plvrlagtwp lspvwgwprs ccaaqrwprp scfskavpgd
      301 clpgsvcvsp kswwagsvsv tlhsgdsast wrwypsgagg ltfhvgarct vqelgpskpe
      361 cppprgclps prapvcwavl rhrsptahpg rlwplfcvaw qvwwacggag epqewaprwa
      421 sppvr
//
LOCUS       XP_061015495             192 aa            linear   MAM 02-DEC-2023
DEFINITION  cytochrome c oxidase assembly factor 8 [Dama dama].
ACCESSION   XP_061015495
VERSION     XP_061015495.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159512.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..192
                     /product="cytochrome c oxidase assembly factor 8"
                     /calculated_mol_wt=22811
     Region          53..181
                     /region_name="COA8"
                     /note="Cytochrome c oxidase assembly factor 8; pfam10231"
                     /db_xref="CDD:463011"
     CDS             1..192
                     /gene="LOC133068278"
                     /coded_by="XM_061159512.1:45..623"
                     /db_xref="GeneID:133068278"
ORIGIN      
        1 masrrparri vltalcrafs grgcqlaper gaerrdaaps rvsrfcpprk srhdwigppd
       61 kysnlrpihf yipenesple qklrelrqet qewnqqfwad qnltfhkeke efvrsrlkak
      121 gldlrtkagq katlnaeema dfykeflskn fqkhmyynrd wykrnfaitf fmgkvaleri
      181 wnklrpkqkt ss
//
LOCUS       XP_061015496             649 aa            linear   MAM 02-DEC-2023
DEFINITION  kinesin light chain 1 isoform X1 [Dama dama].
ACCESSION   XP_061015496
VERSION     XP_061015496.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159513.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..649
                     /product="kinesin light chain 1 isoform X1"
                     /calculated_mol_wt=72991
     Region          35..>149
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          210..435
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          214..241
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          255..283
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          297..325
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(298,301..302,305..306,308,340,343..344,347..348,
                     350..351,382,385..386,389..390,393)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          338..368
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          381..408
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..649
                     /gene="KLC1"
                     /coded_by="XM_061159513.1:108..2057"
                     /db_xref="GeneID:133068279"
ORIGIN      
        1 mydnmstmvy mkedkleklt qdeiisktkq viqglealkn ehnsilqsll etlkclkkdd
       61 esnlveeksn mirkslemle lglseaqvmm alsnhlnave sekqklraqv rrlcqenqwl
      121 rdelantqqk lqkseqsvaq leeekkhlef mnqlkkyddd ispsedkdad stkeplddlf
      181 pndddepgqg iqqqhssaaa aaqqggyeip arlrtlhnlv iqyasqgrye vavplckqal
      241 edlektsghd hpdvatmlni lalvyrdqnk ykdaanllnd alairektlg kdhpavaatl
      301 nnlavlygkr gkykeaeplc kraleirekv lgkdhpdvak qlnnlallcq nqgkyeevey
      361 yyqraleiyq tklgpddpnv aktknnlasc ylkqgkfkqa etlykeiltr aherefgsvd
      421 denkpiwmha eereeckgkq kdgtsfgeyg gwykackvds ptvtttlknl galyrrqgkf
      481 eaaetleeaa mrsrkqgldn vhkqrvaevl sdaesaekrr sreglgadav kyesgpdgge
      541 evsmsvewng dgtgslkrsg sfsklrasir rsseklvrkl kggssrdsep knpgmkrass
      601 lnvlnvggka aedhfqgtag raplrgqrqq qqrpggrqpe lrrprrsla
//
LOCUS       XP_061015497             640 aa            linear   MAM 02-DEC-2023
DEFINITION  kinesin light chain 1 isoform X2 [Dama dama].
ACCESSION   XP_061015497
VERSION     XP_061015497.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159514.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..640
                     /product="kinesin light chain 1 isoform X2"
                     /calculated_mol_wt=72001
     Region          35..>149
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          210..435
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          214..241
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          255..283
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          297..325
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(298,301..302,305..306,308,340,343..344,347..348,
                     350..351,382,385..386,389..390,393)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          338..368
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          381..408
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..640
                     /gene="KLC1"
                     /coded_by="XM_061159514.1:108..2030"
                     /db_xref="GeneID:133068279"
ORIGIN      
        1 mydnmstmvy mkedkleklt qdeiisktkq viqglealkn ehnsilqsll etlkclkkdd
       61 esnlveeksn mirkslemle lglseaqvmm alsnhlnave sekqklraqv rrlcqenqwl
      121 rdelantqqk lqkseqsvaq leeekkhlef mnqlkkyddd ispsedkdad stkeplddlf
      181 pndddepgqg iqqqhssaaa aaqqggyeip arlrtlhnlv iqyasqgrye vavplckqal
      241 edlektsghd hpdvatmlni lalvyrdqnk ykdaanllnd alairektlg kdhpavaatl
      301 nnlavlygkr gkykeaeplc kraleirekv lgkdhpdvak qlnnlallcq nqgkyeevey
      361 yyqraleiyq tklgpddpnv aktknnlasc ylkqgkfkqa etlykeiltr aherefgsvd
      421 denkpiwmha eereeckgkq kdgtsfgeyg gwykackvds ptvtttlknl galyrrqgkf
      481 eaaetleeaa mrsrkqgldn vhkqrvaevl sdaesaekrr sreglgadav kyesgpdgge
      541 edgtgslkrs gsfsklrasi rrsseklvrk lkggssrdse pknpgmkras slnvlnvggk
      601 aaedhfqgta graplrgqrq qqqrpggrqp elrrprrsla
//
LOCUS       XP_061015498             618 aa            linear   MAM 02-DEC-2023
DEFINITION  kinesin light chain 1 isoform X3 [Dama dama].
ACCESSION   XP_061015498
VERSION     XP_061015498.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159515.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..618
                     /product="kinesin light chain 1 isoform X3"
                     /calculated_mol_wt=69277
     Region          35..>149
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          210..435
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          214..241
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          255..283
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          297..325
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(298,301..302,305..306,308,340,343..344,347..348,
                     350..351,382,385..386,389..390,393)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          338..368
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          381..408
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..618
                     /gene="KLC1"
                     /coded_by="XM_061159515.1:107..1963"
                     /db_xref="GeneID:133068279"
ORIGIN      
        1 mydnmstmvy mkedkleklt qdeiisktkq viqglealkn ehnsilqsll etlkclkkdd
       61 esnlveeksn mirkslemle lglseaqvmm alsnhlnave sekqklraqv rrlcqenqwl
      121 rdelantqqk lqkseqsvaq leeekkhlef mnqlkkyddd ispsedkdad stkeplddlf
      181 pndddepgqg iqqqhssaaa aaqqggyeip arlrtlhnlv iqyasqgrye vavplckqal
      241 edlektsghd hpdvatmlni lalvyrdqnk ykdaanllnd alairektlg kdhpavaatl
      301 nnlavlygkr gkykeaeplc kraleirekv lgkdhpdvak qlnnlallcq nqgkyeevey
      361 yyqraleiyq tklgpddpnv aktknnlasc ylkqgkfkqa etlykeiltr aherefgsvd
      421 denkpiwmha eereeckgkq kdgtsfgeyg gwykackvds ptvtttlknl galyrrqgkf
      481 eaaetleeaa mrsrkqgldn vhkqrvaevl sdaesaekrr sreglgadav kyesgpdgge
      541 evsmsvewng dgtgslkrsg sfsklrasir rsseklvrkl kggssrdsep knpgapqaep
      601 lsvdndssss gledasls
//
LOCUS       XP_061015499             609 aa            linear   MAM 02-DEC-2023
DEFINITION  kinesin light chain 1 isoform X4 [Dama dama].
ACCESSION   XP_061015499
VERSION     XP_061015499.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159516.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..609
                     /product="kinesin light chain 1 isoform X4"
                     /calculated_mol_wt=68287
     Region          35..>149
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          210..435
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          214..241
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          255..283
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          297..325
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(298,301..302,305..306,308,340,343..344,347..348,
                     350..351,382,385..386,389..390,393)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          338..368
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          381..408
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..609
                     /gene="KLC1"
                     /coded_by="XM_061159516.1:107..1936"
                     /db_xref="GeneID:133068279"
ORIGIN      
        1 mydnmstmvy mkedkleklt qdeiisktkq viqglealkn ehnsilqsll etlkclkkdd
       61 esnlveeksn mirkslemle lglseaqvmm alsnhlnave sekqklraqv rrlcqenqwl
      121 rdelantqqk lqkseqsvaq leeekkhlef mnqlkkyddd ispsedkdad stkeplddlf
      181 pndddepgqg iqqqhssaaa aaqqggyeip arlrtlhnlv iqyasqgrye vavplckqal
      241 edlektsghd hpdvatmlni lalvyrdqnk ykdaanllnd alairektlg kdhpavaatl
      301 nnlavlygkr gkykeaeplc kraleirekv lgkdhpdvak qlnnlallcq nqgkyeevey
      361 yyqraleiyq tklgpddpnv aktknnlasc ylkqgkfkqa etlykeiltr aherefgsvd
      421 denkpiwmha eereeckgkq kdgtsfgeyg gwykackvds ptvtttlknl galyrrqgkf
      481 eaaetleeaa mrsrkqgldn vhkqrvaevl sdaesaekrr sreglgadav kyesgpdgge
      541 edgtgslkrs gsfsklrasi rrsseklvrk lkggssrdse pknpgapqae plsvdndsss
      601 sgledasls
//
LOCUS       XP_061015500             595 aa            linear   MAM 02-DEC-2023
DEFINITION  kinesin light chain 1 isoform X5 [Dama dama].
ACCESSION   XP_061015500
VERSION     XP_061015500.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159517.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..595
                     /product="kinesin light chain 1 isoform X5"
                     /calculated_mol_wt=67206
     Region          35..>149
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          210..435
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          214..241
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          255..283
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          297..325
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(298,301..302,305..306,308,340,343..344,347..348,
                     350..351,382,385..386,389..390,393)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          338..368
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          381..408
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..595
                     /gene="KLC1"
                     /coded_by="XM_061159517.1:108..1895"
                     /db_xref="GeneID:133068279"
ORIGIN      
        1 mydnmstmvy mkedkleklt qdeiisktkq viqglealkn ehnsilqsll etlkclkkdd
       61 esnlveeksn mirkslemle lglseaqvmm alsnhlnave sekqklraqv rrlcqenqwl
      121 rdelantqqk lqkseqsvaq leeekkhlef mnqlkkyddd ispsedkdad stkeplddlf
      181 pndddepgqg iqqqhssaaa aaqqggyeip arlrtlhnlv iqyasqgrye vavplckqal
      241 edlektsghd hpdvatmlni lalvyrdqnk ykdaanllnd alairektlg kdhpavaatl
      301 nnlavlygkr gkykeaeplc kraleirekv lgkdhpdvak qlnnlallcq nqgkyeevey
      361 yyqraleiyq tklgpddpnv aktknnlasc ylkqgkfkqa etlykeiltr aherefgsvd
      421 denkpiwmha eereeckgkq kdgtsfgeyg gwykackvds ptvtttlknl galyrrqgkf
      481 eaaetleeaa mrsrkqdgtg slkrsgsfsk lrasirrsse klvrklkggs srdsepknpg
      541 mkrasslnvl nvggkaaedh fqgtagrapl rgqrqqqqrp ggrqpelrrp rrsla
//
LOCUS       XP_061015501             574 aa            linear   MAM 02-DEC-2023
DEFINITION  kinesin light chain 1 isoform X6 [Dama dama].
ACCESSION   XP_061015501
VERSION     XP_061015501.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159518.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..574
                     /product="kinesin light chain 1 isoform X6"
                     /calculated_mol_wt=64946
     Region          35..>149
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          210..435
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          214..241
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          255..283
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          297..325
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(298,301..302,305..306,308,340,343..344,347..348,
                     350..351,382,385..386,389..390,393)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          338..368
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          381..408
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..574
                     /gene="KLC1"
                     /coded_by="XM_061159518.1:107..1831"
                     /db_xref="GeneID:133068279"
ORIGIN      
        1 mydnmstmvy mkedkleklt qdeiisktkq viqglealkn ehnsilqsll etlkclkkdd
       61 esnlveeksn mirkslemle lglseaqvmm alsnhlnave sekqklraqv rrlcqenqwl
      121 rdelantqqk lqkseqsvaq leeekkhlef mnqlkkyddd ispsedkdad stkeplddlf
      181 pndddepgqg iqqqhssaaa aaqqggyeip arlrtlhnlv iqyasqgrye vavplckqal
      241 edlektsghd hpdvatmlni lalvyrdqnk ykdaanllnd alairektlg kdhpavaatl
      301 nnlavlygkr gkykeaeplc kraleirekv lgkdhpdvak qlnnlallcq nqgkyeevey
      361 yyqraleiyq tklgpddpnv aktknnlasc ylkqgkfkqa etlykeiltr aherefgsvd
      421 denkpiwmha eereeckgkq kdgtsfgeyg gwykackvds ptvtttlknl galyrrqgkf
      481 eaaetleeaa mrsrkqgldn vhkqrvaevl sdaesaekrr sreglgadav kyesgpdgge
      541 egtagraplr gqrqqqqrpg grqpelrrpr rsla
//
LOCUS       XP_061015502             560 aa            linear   MAM 02-DEC-2023
DEFINITION  kinesin light chain 1 isoform X7 [Dama dama].
ACCESSION   XP_061015502
VERSION     XP_061015502.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159519.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..560
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..560
                     /product="kinesin light chain 1 isoform X7"
                     /calculated_mol_wt=63404
     Region          35..>149
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          210..435
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          214..241
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          255..283
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          297..325
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(298,301..302,305..306,308,340,343..344,347..348,
                     350..351,382,385..386,389..390,393)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          338..368
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          381..408
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..560
                     /gene="KLC1"
                     /coded_by="XM_061159519.1:107..1789"
                     /db_xref="GeneID:133068279"
ORIGIN      
        1 mydnmstmvy mkedkleklt qdeiisktkq viqglealkn ehnsilqsll etlkclkkdd
       61 esnlveeksn mirkslemle lglseaqvmm alsnhlnave sekqklraqv rrlcqenqwl
      121 rdelantqqk lqkseqsvaq leeekkhlef mnqlkkyddd ispsedkdad stkeplddlf
      181 pndddepgqg iqqqhssaaa aaqqggyeip arlrtlhnlv iqyasqgrye vavplckqal
      241 edlektsghd hpdvatmlni lalvyrdqnk ykdaanllnd alairektlg kdhpavaatl
      301 nnlavlygkr gkykeaeplc kraleirekv lgkdhpdvak qlnnlallcq nqgkyeevey
      361 yyqraleiyq tklgpddpnv aktknnlasc ylkqgkfkqa etlykeiltr aherefgsvd
      421 denkpiwmha eereeckgkq kdgtsfgeyg gwykackvds ptvtttlknl galyrrqgkf
      481 eaaetleeaa mrsrkqgldn vhkqrvaevl sdaesaekrr sreglgadav kyesgpdgge
      541 evsmsvewng mrkmklglvk
//
LOCUS       XP_061015503             560 aa            linear   MAM 02-DEC-2023
DEFINITION  kinesin light chain 1 isoform X7 [Dama dama].
ACCESSION   XP_061015503
VERSION     XP_061015503.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159520.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..560
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..560
                     /product="kinesin light chain 1 isoform X7"
                     /calculated_mol_wt=63404
     Region          35..>149
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          210..435
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          214..241
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          255..283
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          297..325
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(298,301..302,305..306,308,340,343..344,347..348,
                     350..351,382,385..386,389..390,393)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          338..368
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          381..408
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..560
                     /gene="KLC1"
                     /coded_by="XM_061159520.1:107..1789"
                     /db_xref="GeneID:133068279"
ORIGIN      
        1 mydnmstmvy mkedkleklt qdeiisktkq viqglealkn ehnsilqsll etlkclkkdd
       61 esnlveeksn mirkslemle lglseaqvmm alsnhlnave sekqklraqv rrlcqenqwl
      121 rdelantqqk lqkseqsvaq leeekkhlef mnqlkkyddd ispsedkdad stkeplddlf
      181 pndddepgqg iqqqhssaaa aaqqggyeip arlrtlhnlv iqyasqgrye vavplckqal
      241 edlektsghd hpdvatmlni lalvyrdqnk ykdaanllnd alairektlg kdhpavaatl
      301 nnlavlygkr gkykeaeplc kraleirekv lgkdhpdvak qlnnlallcq nqgkyeevey
      361 yyqraleiyq tklgpddpnv aktknnlasc ylkqgkfkqa etlykeiltr aherefgsvd
      421 denkpiwmha eereeckgkq kdgtsfgeyg gwykackvds ptvtttlknl galyrrqgkf
      481 eaaetleeaa mrsrkqgldn vhkqrvaevl sdaesaekrr sreglgadav kyesgpdgge
      541 evsmsvewng mrkmklglvk
//
LOCUS       XP_061015504             551 aa            linear   MAM 02-DEC-2023
DEFINITION  kinesin light chain 1 isoform X8 [Dama dama].
ACCESSION   XP_061015504
VERSION     XP_061015504.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159521.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..551
                     /product="kinesin light chain 1 isoform X8"
                     /calculated_mol_wt=62414
     Region          35..>149
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          210..435
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          214..241
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          255..283
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          297..325
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(298,301..302,305..306,308,340,343..344,347..348,
                     350..351,382,385..386,389..390,393)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          338..368
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          381..408
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..551
                     /gene="KLC1"
                     /coded_by="XM_061159521.1:107..1762"
                     /db_xref="GeneID:133068279"
ORIGIN      
        1 mydnmstmvy mkedkleklt qdeiisktkq viqglealkn ehnsilqsll etlkclkkdd
       61 esnlveeksn mirkslemle lglseaqvmm alsnhlnave sekqklraqv rrlcqenqwl
      121 rdelantqqk lqkseqsvaq leeekkhlef mnqlkkyddd ispsedkdad stkeplddlf
      181 pndddepgqg iqqqhssaaa aaqqggyeip arlrtlhnlv iqyasqgrye vavplckqal
      241 edlektsghd hpdvatmlni lalvyrdqnk ykdaanllnd alairektlg kdhpavaatl
      301 nnlavlygkr gkykeaeplc kraleirekv lgkdhpdvak qlnnlallcq nqgkyeevey
      361 yyqraleiyq tklgpddpnv aktknnlasc ylkqgkfkqa etlykeiltr aherefgsvd
      421 denkpiwmha eereeckgkq kdgtsfgeyg gwykackvds ptvtttlknl galyrrqgkf
      481 eaaetleeaa mrsrkqgldn vhkqrvaevl sdaesaekrr sreglgadav kyesgpdgge
      541 emrkmklglv k
//
LOCUS       XP_061015505             551 aa            linear   MAM 02-DEC-2023
DEFINITION  kinesin light chain 1 isoform X8 [Dama dama].
ACCESSION   XP_061015505
VERSION     XP_061015505.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159522.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..551
                     /product="kinesin light chain 1 isoform X8"
                     /calculated_mol_wt=62414
     Region          35..>149
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          210..435
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          214..241
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          255..283
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          297..325
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(298,301..302,305..306,308,340,343..344,347..348,
                     350..351,382,385..386,389..390,393)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          338..368
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          381..408
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..551
                     /gene="KLC1"
                     /coded_by="XM_061159522.1:107..1762"
                     /db_xref="GeneID:133068279"
ORIGIN      
        1 mydnmstmvy mkedkleklt qdeiisktkq viqglealkn ehnsilqsll etlkclkkdd
       61 esnlveeksn mirkslemle lglseaqvmm alsnhlnave sekqklraqv rrlcqenqwl
      121 rdelantqqk lqkseqsvaq leeekkhlef mnqlkkyddd ispsedkdad stkeplddlf
      181 pndddepgqg iqqqhssaaa aaqqggyeip arlrtlhnlv iqyasqgrye vavplckqal
      241 edlektsghd hpdvatmlni lalvyrdqnk ykdaanllnd alairektlg kdhpavaatl
      301 nnlavlygkr gkykeaeplc kraleirekv lgkdhpdvak qlnnlallcq nqgkyeevey
      361 yyqraleiyq tklgpddpnv aktknnlasc ylkqgkfkqa etlykeiltr aherefgsvd
      421 denkpiwmha eereeckgkq kdgtsfgeyg gwykackvds ptvtttlknl galyrrqgkf
      481 eaaetleeaa mrsrkqgldn vhkqrvaevl sdaesaekrr sreglgadav kyesgpdgge
      541 emrkmklglv k
//
LOCUS       XP_061015506             529 aa            linear   MAM 02-DEC-2023
DEFINITION  kinesin light chain 1 isoform X9 [Dama dama].
ACCESSION   XP_061015506
VERSION     XP_061015506.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159523.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..529
                     /product="kinesin light chain 1 isoform X9"
                     /calculated_mol_wt=60151
     Region          35..>149
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          210..435
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          214..241
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          255..283
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          297..325
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(298,301..302,305..306,308,340,343..344,347..348,
                     350..351,382,385..386,389..390,393)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          338..368
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          381..408
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..529
                     /gene="KLC1"
                     /coded_by="XM_061159523.1:107..1696"
                     /db_xref="GeneID:133068279"
ORIGIN      
        1 mydnmstmvy mkedkleklt qdeiisktkq viqglealkn ehnsilqsll etlkclkkdd
       61 esnlveeksn mirkslemle lglseaqvmm alsnhlnave sekqklraqv rrlcqenqwl
      121 rdelantqqk lqkseqsvaq leeekkhlef mnqlkkyddd ispsedkdad stkeplddlf
      181 pndddepgqg iqqqhssaaa aaqqggyeip arlrtlhnlv iqyasqgrye vavplckqal
      241 edlektsghd hpdvatmlni lalvyrdqnk ykdaanllnd alairektlg kdhpavaatl
      301 nnlavlygkr gkykeaeplc kraleirekv lgkdhpdvak qlnnlallcq nqgkyeevey
      361 yyqraleiyq tklgpddpnv aktknnlasc ylkqgkfkqa etlykeiltr aherefgsvd
      421 denkpiwmha eereeckgkq kdgtsfgeyg gwykackvds ptvtttlknl galyrrqgkf
      481 eaaetleeaa mrsrkqgtag raplrgqrqq qqrpggrqpe lrrprrsla
//
LOCUS       XP_061015507             506 aa            linear   MAM 02-DEC-2023
DEFINITION  kinesin light chain 1 isoform X10 [Dama dama].
ACCESSION   XP_061015507
VERSION     XP_061015507.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159524.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..506
                     /product="kinesin light chain 1 isoform X10"
                     /calculated_mol_wt=57549
     Region          35..>149
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          210..435
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          214..241
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          255..283
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          297..325
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(298,301..302,305..306,308,340,343..344,347..348,
                     350..351,382,385..386,389..390,393)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          338..368
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          381..408
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..506
                     /gene="KLC1"
                     /coded_by="XM_061159524.1:107..1627"
                     /db_xref="GeneID:133068279"
ORIGIN      
        1 mydnmstmvy mkedkleklt qdeiisktkq viqglealkn ehnsilqsll etlkclkkdd
       61 esnlveeksn mirkslemle lglseaqvmm alsnhlnave sekqklraqv rrlcqenqwl
      121 rdelantqqk lqkseqsvaq leeekkhlef mnqlkkyddd ispsedkdad stkeplddlf
      181 pndddepgqg iqqqhssaaa aaqqggyeip arlrtlhnlv iqyasqgrye vavplckqal
      241 edlektsghd hpdvatmlni lalvyrdqnk ykdaanllnd alairektlg kdhpavaatl
      301 nnlavlygkr gkykeaeplc kraleirekv lgkdhpdvak qlnnlallcq nqgkyeevey
      361 yyqraleiyq tklgpddpnv aktknnlasc ylkqgkfkqa etlykeiltr aherefgsvd
      421 denkpiwmha eereeckgkq kdgtsfgeyg gwykackvds ptvtttlknl galyrrqgkf
      481 eaaetleeaa mrsrkqheas qfsecp
//
LOCUS       XP_061015509             274 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA repair protein XRCC3 isoform X1 [Dama dama].
ACCESSION   XP_061015509
VERSION     XP_061015509.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159526.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..274
                     /product="DNA repair protein XRCC3 isoform X1"
                     /calculated_mol_wt=29278
     Region          89..>187
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     CDS             1..274
                     /gene="XRCC3"
                     /coded_by="XM_061159526.1:200..1024"
                     /db_xref="GeneID:133068281"
ORIGIN      
        1 mdldrldlhp riiiavkkak lrsvkevlhl sgpdlqrltr lsspdvrlll raaasllqgh
       61 gvctalhllr qeglfpqqhq rlslgcpvld allrgglpld gitelagcss agktqlalql
      121 clavqlprqy gglgagavyv ctedafpsrr lqqliaqqqr lradvpgdvi skikfghqif
      181 iehaadvasp rprsrphqas pvypaaetpt arrtgpppgg rparfqsasg ggegplvtap
      241 gpswtdpldc wplagrqdna tyesrarrgv vvcg
//
LOCUS       XP_061015510             341 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA repair protein XRCC3 isoform X2 [Dama dama].
ACCESSION   XP_061015510
VERSION     XP_061015510.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159527.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..341
                     /product="DNA repair protein XRCC3 isoform X2"
                     /calculated_mol_wt=36568
     Region          89..320
                     /region_name="XRCC3"
                     /note="XRCC3 recombinase; cd19491"
                     /db_xref="CDD:410899"
     Site            order(110..115,143,213,258,295)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:410899"
     CDS             1..341
                     /gene="XRCC3"
                     /coded_by="XM_061159527.1:228..1253"
                     /db_xref="GeneID:133068281"
ORIGIN      
        1 mdldrldlhp riiiavkkak lrsvkevlhl sgpdlqrltr lsspdvrlll raaasllqgh
       61 gvctalhllr qeglfpqqhq rlslgcpvld allrgglpld gitelagcss agktqlalql
      121 clavqlprqy gglgagavyv ctedafpsrr lqqliaqqqr lradvpgdvi skikfghqif
      181 iehaadvdtl lhcvsekvpv llargmarlv vvdsvaapfr cefdgaalal raqrllalga
      241 elrrlscafr spvlcvnqvt ealeeqdsva glpgmspalg itwanqllvr lladrqrpee
      301 talappgrtl rvvfaphlps sscsytitse gvrgtpgttc g
//
LOCUS       XP_061015511             341 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA repair protein XRCC3 isoform X2 [Dama dama].
ACCESSION   XP_061015511
VERSION     XP_061015511.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159528.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..341
                     /product="DNA repair protein XRCC3 isoform X2"
                     /calculated_mol_wt=36568
     Region          89..320
                     /region_name="XRCC3"
                     /note="XRCC3 recombinase; cd19491"
                     /db_xref="CDD:410899"
     Site            order(110..115,143,213,258,295)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:410899"
     CDS             1..341
                     /gene="XRCC3"
                     /coded_by="XM_061159528.1:246..1271"
                     /db_xref="GeneID:133068281"
ORIGIN      
        1 mdldrldlhp riiiavkkak lrsvkevlhl sgpdlqrltr lsspdvrlll raaasllqgh
       61 gvctalhllr qeglfpqqhq rlslgcpvld allrgglpld gitelagcss agktqlalql
      121 clavqlprqy gglgagavyv ctedafpsrr lqqliaqqqr lradvpgdvi skikfghqif
      181 iehaadvdtl lhcvsekvpv llargmarlv vvdsvaapfr cefdgaalal raqrllalga
      241 elrrlscafr spvlcvnqvt ealeeqdsva glpgmspalg itwanqllvr lladrqrpee
      301 talappgrtl rvvfaphlps sscsytitse gvrgtpgttc g
//
LOCUS       XP_061015512             341 aa            linear   MAM 02-DEC-2023
DEFINITION  DNA repair protein XRCC3 isoform X2 [Dama dama].
ACCESSION   XP_061015512
VERSION     XP_061015512.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159529.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..341
                     /product="DNA repair protein XRCC3 isoform X2"
                     /calculated_mol_wt=36568
     Region          89..320
                     /region_name="XRCC3"
                     /note="XRCC3 recombinase; cd19491"
                     /db_xref="CDD:410899"
     Site            order(110..115,143,213,258,295)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:410899"
     CDS             1..341
                     /gene="XRCC3"
                     /coded_by="XM_061159529.1:219..1244"
                     /db_xref="GeneID:133068281"
ORIGIN      
        1 mdldrldlhp riiiavkkak lrsvkevlhl sgpdlqrltr lsspdvrlll raaasllqgh
       61 gvctalhllr qeglfpqqhq rlslgcpvld allrgglpld gitelagcss agktqlalql
      121 clavqlprqy gglgagavyv ctedafpsrr lqqliaqqqr lradvpgdvi skikfghqif
      181 iehaadvdtl lhcvsekvpv llargmarlv vvdsvaapfr cefdgaalal raqrllalga
      241 elrrlscafr spvlcvnqvt ealeeqdsva glpgmspalg itwanqllvr lladrqrpee
      301 talappgrtl rvvfaphlps sscsytitse gvrgtpgttc g
//
LOCUS       XP_061015513             252 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger FYVE domain-containing protein 21 [Dama dama].
ACCESSION   XP_061015513
VERSION     XP_061015513.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159530.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..252
                     /product="zinc finger FYVE domain-containing protein 21"
                     /calculated_mol_wt=27622
     Region          38..101
                     /region_name="FYVE_ZF21"
                     /note="FYVE domain found in zinc finger FYVE
                     domain-containing protein 21 (ZF21) and similar proteins;
                     cd15727"
                     /db_xref="CDD:277266"
     Site            order(41,44,62..67,69..70,94..96)
                     /site_type="other"
                     /note="putative phosphatidylinositol 3-phosphate binding
                     site [chemical binding]"
                     /db_xref="CDD:277266"
     Region          109..251
                     /region_name="ZFYVE21_C"
                     /note="Zinc finger FYVE domain-containing protein 21
                     C-terminus; pfam16696"
                     /db_xref="CDD:465237"
     CDS             1..252
                     /gene="ZFYVE21"
                     /coded_by="XM_061159530.1:43..801"
                     /db_xref="GeneID:133068282"
ORIGIN      
        1 mssevaarrd akklvrspsg lrmvpehray gspfgleepp wvpdkecprc mqcdtkfdfl
       61 trkhhcrrcg kcfcdkccgq kvalrrmcfv dpvrqcagca pvsrreadfy drqlklllsg
      121 atflvtfgns ekpdtmicrl ssnqrfllld gdgddhreie variaavqml teglppgdtl
      181 ahtslpgsrp vaeggnarat gmtlqytapg aeglaqltlt agedaegsrr qatawlaamh
      241 kaakllhesr dq
//
LOCUS       XP_061015514            1122 aa            linear   MAM 02-DEC-2023
DEFINITION  apoptosis-stimulating of p53 protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061015514
VERSION     XP_061015514.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159531.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1122
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1122
                     /product="apoptosis-stimulating of p53 protein 1 isoform
                     X1"
                     /calculated_mol_wt=122110
     Region          2..86
                     /region_name="RA_ASPP1"
                     /note="Ras-associating (RA) domain found in
                     apoptosis-stimulating protein of p53 protein 1 (ASPP1);
                     cd17224"
                     /db_xref="CDD:340744"
     Region          <158..>331
                     /region_name="GumC"
                     /note="Exopolysaccharide export protein/domain GumC/Wzc1
                     [Cell wall/membrane/envelope biogenesis]; COG3206"
                     /db_xref="CDD:442439"
     Region          <323..>530
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          <480..905
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          924..1010
                     /region_name="Ank_2"
                     /note="Ankyrin repeats (3 copies); pfam12796"
                     /db_xref="CDD:463710"
     Region          924..950
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(925..926,929..931,933..934,938,941,950,952,954,
                     958..959,962..964,966..967,971,974,983,985,987,991..992,
                     995..997,999..1000,1004,1007)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          952..983
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          985..1014
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1054..1110
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
     Site            order(1060,1062,1065,1069,1090..1091,1104,1106..1107)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212887"
     CDS             1..1122
                     /gene="PPP1R13B"
                     /coded_by="XM_061159531.1:76..3444"
                     /db_xref="GeneID:133068283"
ORIGIN      
        1 mmpmiltvfl snneqiltev pitpettcrd vvefckepge gschlaevwr gnerpipfdy
       61 mmyehlqkwg prreevkffl rhedspaesn eqggrqtqeq rtqrnvtnip gekrtengvg
      121 nprveltlse lqdmaarqqq qienqqqmlv akeqrlhflk qqerrqqqsi seneklqklk
      181 erveaqenkl kkiramrgqv dyskimngnl saeierfsam fqekkqevqt ailrvdqlsq
      241 qledlkkgkl ngfqpyngkl tgpaavelkr lyqelqirnq lnqeqnsklq qqkellnkrn
      301 mevammdkri nelrerlygk kiqlsrvngt sspqsplsap grvaavgpyi qvpsagscpa
      361 pgdpvkpqsl tvassaahgr sksdgrgqpr vtrlwtvsdl dvgpergssq rptspfakpn
      421 dgnwptlkqn ssssvrppqi agvdwkdasa egplkqgavs sqpmplsals apeklgmeig
      481 kvppplpgvs kplppsygty pspapvgpgs tnslerrkeg slprpsagla grqkpaplpp
      541 aggphqpgss qqiqqrisvp psptyppagl pafpagdgkp elpltvairp fladkgprpq
      601 sprkgpqtvn sssiysmylq qatppksyqp aahsatnksv kavygkpvlp sgstspsplp
      661 flhgslapga tqppppaesa ekepepespa ppgdgaaves lprplsptkl tpivhsplry
      721 qsdadlealr rklanaprpl kkrssitepe gpggpniqkl lyqrfntlag gmegapfyqp
      781 spsqdflgsl advdngnata ngnlgeagpa pptaplpaep apasdandnr lpspepegll
      841 cppnthqtae paeddnnnva tapsteqvps pgaeapspge eqappslavp lpsastnkrt
      901 nlkkpnsert ghglrvrfnp lallldasle gefdlvqrvi yevedpskpn degitplhna
      961 vcaghhhivr flldfgvnvn aadsdgwtpl hcaascnsvh lckqlvesga aifastisdi
     1021 etaadkceem eegyiqcsqf lygvqeklgv mnkgvvyalw ayeaqnsdel sfregdalti
     1081 lrrkdevetd wwwarlgdre gyvprnllgl yprikprqrt la
//
LOCUS       XP_061015515            1087 aa            linear   MAM 02-DEC-2023
DEFINITION  apoptosis-stimulating of p53 protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061015515
VERSION     XP_061015515.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159532.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1087
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1087
                     /product="apoptosis-stimulating of p53 protein 1 isoform
                     X2"
                     /calculated_mol_wt=118248
     Region          2..86
                     /region_name="RA_ASPP1"
                     /note="Ras-associating (RA) domain found in
                     apoptosis-stimulating protein of p53 protein 1 (ASPP1);
                     cd17224"
                     /db_xref="CDD:340744"
     Region          <158..>331
                     /region_name="GumC"
                     /note="Exopolysaccharide export protein/domain GumC/Wzc1
                     [Cell wall/membrane/envelope biogenesis]; COG3206"
                     /db_xref="CDD:442439"
     Region          <332..870
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          889..975
                     /region_name="Ank_2"
                     /note="Ankyrin repeats (3 copies); pfam12796"
                     /db_xref="CDD:463710"
     Region          889..915
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(890..891,894..896,898..899,903,906,915,917,919,
                     923..924,927..929,931..932,936,939,948,950,952,956..957,
                     960..962,964..965,969,972)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          917..948
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          950..979
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1019..1075
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
     Site            order(1025,1027,1030,1034,1055..1056,1069,1071..1072)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212887"
     CDS             1..1087
                     /gene="PPP1R13B"
                     /coded_by="XM_061159532.1:76..3339"
                     /db_xref="GeneID:133068283"
ORIGIN      
        1 mmpmiltvfl snneqiltev pitpettcrd vvefckepge gschlaevwr gnerpipfdy
       61 mmyehlqkwg prreevkffl rhedspaesn eqggrqtqeq rtqrnvtnip gekrtengvg
      121 nprveltlse lqdmaarqqq qienqqqmlv akeqrlhflk qqerrqqqsi seneklqklk
      181 erveaqenkl kkiramrgqv dyskimngnl saeierfsam fqekkqevqt ailrvdqlsq
      241 qledlkkgkl ngfqpyngkl tgpaavelkr lyqelqirnq lnqeqnsklq qqkellnkrn
      301 mevammdkri nelrerlygk kiqlsrvngt sspqsplsap grvaavgpyi qvpsagscpa
      361 pgdpvkpqsl tvassaahgr sksandgnwp tlkqnssssv rppqiagvdw kdasaegplk
      421 qgavssqpmp lsalsapekl gmeigkvppp lpgvskplpp sygtypspap vgpgstnsle
      481 rrkegslprp saglagrqkp aplppaggph qpgssqqiqq risvppspty ppaglpafpa
      541 gdgkpelplt vairpfladk gprpqsprkg pqtvnsssiy smylqqatpp ksyqpaahsa
      601 tnksvkavyg kpvlpsgsts psplpflhgs lapgatqppp paesaekepe pespappgdg
      661 aaveslprpl sptkltpivh splryqsdad lealrrklan aprplkkrss itepegpggp
      721 niqkllyqrf ntlaggmega pfyqpspsqd flgsladvdn gnatangnlg eagpapptap
      781 lpaepapasd andnrlpspe pegllcppnt hqtaepaedd nnnvatapst eqvpspgaea
      841 pspgeeqapp slavplpsas tnkrtnlkkp nsertghglr vrfnplalll daslegefdl
      901 vqrviyeved pskpndegit plhnavcagh hhivrflldf gvnvnaadsd gwtplhcaas
      961 cnsvhlckql vesgaaifas tisdietaad kceemeegyi qcsqflygvq eklgvmnkgv
     1021 vyalwayeaq nsdelsfreg daltilrrkd evetdwwwar lgdregyvpr nllglyprik
     1081 prqrtla
//
LOCUS       XP_061015516              60 aa            linear   MAM 02-DEC-2023
DEFINITION  ATP synthase subunit ATP5MJ, mitochondrial [Dama dama].
ACCESSION   XP_061015516
VERSION     XP_061015516.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159533.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..60
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..60
                     /product="ATP synthase subunit ATP5MJ, mitochondrial"
                     /calculated_mol_wt=6757
     Region          1..60
                     /region_name="Mit_proteolip"
                     /note="Mitochondrial proteolipid; pfam08039"
                     /db_xref="CDD:429796"
     CDS             1..60
                     /gene="ATP5MJ"
                     /coded_by="XM_061159533.1:118..300"
                     /db_xref="GeneID:133068285"
ORIGIN      
        1 mlqslikkvw ipmkpyytqv yqeiwvgtgl mayivykirs adkrskalka sspapahghh
//
LOCUS       XP_061015517            1833 aa            linear   MAM 02-DEC-2023
DEFINITION  kinesin-like protein KIF26A [Dama dama].
ACCESSION   XP_061015517
VERSION     XP_061015517.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159534.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1833
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1833
                     /product="kinesin-like protein KIF26A"
                     /calculated_mol_wt=188602
     Region          360..697
                     /region_name="KISc"
                     /note="Kinesin motor domain; cd00106"
                     /db_xref="CDD:276812"
     Site            order(366,368..369,458..466,615)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276812"
     Site            order(651,654,657)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276812"
     Region          <723..1271
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1078..1579
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1833
                     /gene="KIF26A"
                     /coded_by="XM_061159534.1:1..5502"
                     /db_xref="GeneID:133068286"
ORIGIN      
        1 mgsrggplca aqpavaeggp vreplqllev sprkrltagp ehdpcgsrpa pegagpgaeq
       61 ghsaggggwc rhchtklael krqawklvsg pgtplrdpcl sallldklpa crpeaerrcd
      121 vcathltqlt realqllqgp tsredtdaph agpslappga stapslrdgp apagpagrqs
      181 grtgpdrrkg pawpsgpsvq vsvapaglgg alstvtiqaq qclegmwsvs rvnsflpptc
      241 laeaavaava vadtvrdgpp pvgsdgaskt wglvspapga ppggstgpsa aasfflraaq
      301 klslaskrkk pppppppapr rastyptdfs gvlqlwpppa ppcllratsk akdnpssvgk
      361 vkvmlriwpa qgaqrlaest sflkvdprkk qvtlydpaag ppgstgprra ptaavpkmfa
      421 fdavfpqdse qaevcsgtva dvlqsvvsga dgcifsfghs slgksytmig rdsspqslgv
      481 vpcaiswlfr lmderrertg arfsvrvsav evcgrgqslr dllaevasgs lqdaqspgvy
      541 lredpacgaq lqnqselrap taekaafyld aalaaredtr ggshvlftlh vyqyrvekcg
      601 rggmsggrsr lhlidlgsce eapggppsls lsalgsvila lvsgakhvpy rehrltallr
      661 etlatancrt tmiahvsdap ahhaetlstv qlaarvhrlr rkkvkyasss sggdssceeg
      721 harrpphlrp fhpralapdp drlaasspgd pdysssseqs cdtviyvgpg gtalsdrelt
      781 dsegppdfvp iipslsrprp tpgpreadhf rcstfaelqe rlgcipgteg ppgaqagpar
      841 vgrkplppet avprtpvgap lasstprgsp sphaqqgale ppkagadqre egstrpelpt
      901 pdkakaggge rplpspappp pwqpeaggas depgggdrag avrtppvgrs gqaegpclpt
      961 rghrlergll tttvtlqqpv elngedelvf tlveelslgg ltgpgrpssl asfgsdcslq
     1021 alasgsrpvs iissindefd aytspppsga ldevawagss qsssgsswls evsvctadsl
     1081 gptpagpldp igsevlagpp slgssipdgg tpedsglqrs errrldspgp argprpteea
     1141 maapgqpcre psavsprgpa paqtlhsslp rtprttsvas rvgcprlaag lhgpgglfed
     1201 pwllraddcg plplasagra pspaptlaca rrvvdgcevg qvahrpevva pipplrrgat
     1261 tlgvstpsas vgdslveaaa clgspkatpa skksaapkgg fcarsggvap pappvrkssl
     1321 ehktgpglss pqagspawpg aaaflrgdge arpggradhs ipratsslka rtgkaeaacr
     1381 pathgslerc eslahgsska reapsrpara vprlgvppts ptpgpapacr sspakgvgap
     1441 ktpssgskgr savaggpral gssakplapt agrapcgpvt gpraapraap gvgakasrgt
     1501 imgtkqalra thsrvhelaa ggargrggas wgsadsdsgn dsgvnvseer palpspystv
     1561 taprrpqrcs sghgsdnssv lsgelppamg rtalfyhsgg ssgyesvlrd seatgsassa
     1621 pdsmsdsgaa spgarsrslk spkkratglq rrrlipaplp daaalgrkps lpgqwvdlpp
     1681 plagalkepf eikvyeiddv erlqrrrlpp regpaepsqs sekgpvcvga rlrlperrlq
     1741 rlqevqakre llrgelaetq grlmlepgrw leqfevdpgl epesaeylva lerataaleq
     1801 cvnlckahvm mvtcfdisaa tpaaapgpqe vdv
//
LOCUS       XP_061015518             233 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 179 [Dama dama].
ACCESSION   XP_061015518
VERSION     XP_061015518.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159535.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..233
                     /product="transmembrane protein 179"
                     /calculated_mol_wt=26191
     CDS             1..233
                     /gene="TMEM179"
                     /coded_by="XM_061159535.1:83..784"
                     /db_xref="GeneID:133068287"
ORIGIN      
        1 malnnflfaq cvcyflaflf sfvvvvplse nghdfrgrcl lftegmwlsa nltvqererf
       61 tvqewgppaa crfsllasll slllaaahaw ralfflckgh egsflyafln llvsafvvfl
      121 vfiastivsv gftmwcdait ekgsvphsce elqgidleln vdnsafydqf aiaqfglwas
      181 wlawlaitil aflkvyhnyr qedlldnlvh ekelllarpa praafqdeks avi
//
LOCUS       XP_061015520            1245 aa            linear   MAM 02-DEC-2023
DEFINITION  inverted formin-2 isoform X1 [Dama dama].
ACCESSION   XP_061015520
VERSION     XP_061015520.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159537.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1245
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1245
                     /product="inverted formin-2 isoform X1"
                     /calculated_mol_wt=134395
     Region          30..184
                     /region_name="Drf_GBD"
                     /note="Diaphanous GTPase-binding Domain; pfam06371"
                     /db_xref="CDD:461886"
     Region          188..373
                     /region_name="Drf_FH3"
                     /note="Diaphanous FH3 Domain; pfam06367"
                     /db_xref="CDD:461885"
     Region          558..927
                     /region_name="FH2"
                     /note="Formin Homology 2 Domain; cl19758"
                     /db_xref="CDD:418645"
     Region          968..997
                     /region_name="WH2_INF2"
                     /note="Wiskott Aldrich syndrome homology region 2 (WH2
                     motif) found in Inverted formin-2 (INF2); cd22061"
                     /db_xref="CDD:409204"
     Site            order(974..975,977..979,981..983,988..991)
                     /site_type="other"
                     /note="actin-binding motif [polypeptide binding]"
                     /db_xref="CDD:409204"
     Region          988..991
                     /region_name="actin-binding sequence"
                     /note="actin-binding sequence [structural motif]"
                     /db_xref="CDD:409204"
     CDS             1..1245
                     /gene="INF2"
                     /coded_by="XM_061159537.1:56..3793"
                     /db_xref="GeneID:133068288"
ORIGIN      
        1 mrsqgnaggs prqapawvgr gsrkvlrvwl skmsvkegaq rkwaalkekl gpqdsdptea
       61 nlesaepelc irllqvpsvv nysglrkrle ssdggwmvqf leqsgldlll ealarlsgrg
      121 variadallq ltcvscvrav mnsregiqyi lsnqayvrql slaldtsnmm vkkqvfella
      181 alciyspegh altldaldhy ktvcgqqyrf svimselsds dnvpyvatll svvnaiilgp
      241 edvrtraqlr sefiglqlld vltrlrdled gdlliqletf reakaedeee llrvfggidi
      301 nshqevfsal fhkvscspas vhllsvlqgl lhlepslrss qllwealesl vnravllasd
      361 gqectleemv erllsikgrp rpcsldkahk stqadlgqsq rgsspqnssa ptaglggqqp
      421 aaalasplvt svqgergpap qptaperler pppppapplp dstttppppp pppplppppp
      481 gmgaafpspp ppppppppns agtvpppppl pglggppppp ppppplpgis gppaaggvee
      541 iivaqvdsgl gsawvprhrr vnpptlrmkk lnwqklpssv aregssmwat lsspdaevve
      601 pdfssierlf sfptakpkeq avaparkepk eitfldskks lnlniflkqf kcsneevtam
      661 iragdstkfd vevlkqllkl lpekheienl rsfaedrarl asadqfylll lgipcyqlri
      721 eclllcegta vvldmvrpka qlllaacesl ltshrlpvfc qlilkignfl nygshtgdad
      781 gfkmstllkl tetksqqsrv tllhhvleev eeshpdllql pqdlelpara aginlegiha
      841 esssnlkkll emeqkvsssi pevqeqyahr lqasitdsqa leevfqaieq kqlelasylc
      901 edaqqlsled tlstmktfrd lflralkenk drkeqaakae rrkqqlaeee arrprgeggk
      961 aarrgggkqe evcvidalla dirkgfqlrk targrgdaea asraaatdpp rnkapaatrd
     1021 pvggtsapis epgldaaagr eprgwdlada aptshqptgd ssetggsgpl errsswytda
     1081 sdflptedpq gpqppagaws vvlgdaqalk pldfsdqppk amglsqdtee pmarlgacqa
     1141 kadstgegle daaahgrrag lpaagpdeae dgeltapdsa ldtsldrsfs edavtdssgs
     1201 stlpraqgrt skgtgkrrkk rpsrnqeeva pdpdanktkr lcviq
//
LOCUS       XP_061015521            1245 aa            linear   MAM 02-DEC-2023
DEFINITION  inverted formin-2 isoform X1 [Dama dama].
ACCESSION   XP_061015521
VERSION     XP_061015521.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159538.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1245
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1245
                     /product="inverted formin-2 isoform X1"
                     /calculated_mol_wt=134395
     Region          30..184
                     /region_name="Drf_GBD"
                     /note="Diaphanous GTPase-binding Domain; pfam06371"
                     /db_xref="CDD:461886"
     Region          188..373
                     /region_name="Drf_FH3"
                     /note="Diaphanous FH3 Domain; pfam06367"
                     /db_xref="CDD:461885"
     Region          558..927
                     /region_name="FH2"
                     /note="Formin Homology 2 Domain; cl19758"
                     /db_xref="CDD:418645"
     Region          968..997
                     /region_name="WH2_INF2"
                     /note="Wiskott Aldrich syndrome homology region 2 (WH2
                     motif) found in Inverted formin-2 (INF2); cd22061"
                     /db_xref="CDD:409204"
     Site            order(974..975,977..979,981..983,988..991)
                     /site_type="other"
                     /note="actin-binding motif [polypeptide binding]"
                     /db_xref="CDD:409204"
     Region          988..991
                     /region_name="actin-binding sequence"
                     /note="actin-binding sequence [structural motif]"
                     /db_xref="CDD:409204"
     CDS             1..1245
                     /gene="INF2"
                     /coded_by="XM_061159538.1:57..3794"
                     /db_xref="GeneID:133068288"
ORIGIN      
        1 mrsqgnaggs prqapawvgr gsrkvlrvwl skmsvkegaq rkwaalkekl gpqdsdptea
       61 nlesaepelc irllqvpsvv nysglrkrle ssdggwmvqf leqsgldlll ealarlsgrg
      121 variadallq ltcvscvrav mnsregiqyi lsnqayvrql slaldtsnmm vkkqvfella
      181 alciyspegh altldaldhy ktvcgqqyrf svimselsds dnvpyvatll svvnaiilgp
      241 edvrtraqlr sefiglqlld vltrlrdled gdlliqletf reakaedeee llrvfggidi
      301 nshqevfsal fhkvscspas vhllsvlqgl lhlepslrss qllwealesl vnravllasd
      361 gqectleemv erllsikgrp rpcsldkahk stqadlgqsq rgsspqnssa ptaglggqqp
      421 aaalasplvt svqgergpap qptaperler pppppapplp dstttppppp pppplppppp
      481 gmgaafpspp ppppppppns agtvpppppl pglggppppp ppppplpgis gppaaggvee
      541 iivaqvdsgl gsawvprhrr vnpptlrmkk lnwqklpssv aregssmwat lsspdaevve
      601 pdfssierlf sfptakpkeq avaparkepk eitfldskks lnlniflkqf kcsneevtam
      661 iragdstkfd vevlkqllkl lpekheienl rsfaedrarl asadqfylll lgipcyqlri
      721 eclllcegta vvldmvrpka qlllaacesl ltshrlpvfc qlilkignfl nygshtgdad
      781 gfkmstllkl tetksqqsrv tllhhvleev eeshpdllql pqdlelpara aginlegiha
      841 esssnlkkll emeqkvsssi pevqeqyahr lqasitdsqa leevfqaieq kqlelasylc
      901 edaqqlsled tlstmktfrd lflralkenk drkeqaakae rrkqqlaeee arrprgeggk
      961 aarrgggkqe evcvidalla dirkgfqlrk targrgdaea asraaatdpp rnkapaatrd
     1021 pvggtsapis epgldaaagr eprgwdlada aptshqptgd ssetggsgpl errsswytda
     1081 sdflptedpq gpqppagaws vvlgdaqalk pldfsdqppk amglsqdtee pmarlgacqa
     1141 kadstgegle daaahgrrag lpaagpdeae dgeltapdsa ldtsldrsfs edavtdssgs
     1201 stlpraqgrt skgtgkrrkk rpsrnqeeva pdpdanktkr lcviq
//
LOCUS       XP_061015522            1236 aa            linear   MAM 02-DEC-2023
DEFINITION  inverted formin-2 isoform X2 [Dama dama].
ACCESSION   XP_061015522
VERSION     XP_061015522.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159539.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1236
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1236
                     /product="inverted formin-2 isoform X2"
                     /calculated_mol_wt=133438
     Region          30..184
                     /region_name="Drf_GBD"
                     /note="Diaphanous GTPase-binding Domain; pfam06371"
                     /db_xref="CDD:461886"
     Region          188..373
                     /region_name="Drf_FH3"
                     /note="Diaphanous FH3 Domain; pfam06367"
                     /db_xref="CDD:461885"
     Region          558..927
                     /region_name="FH2"
                     /note="Formin Homology 2 Domain; cl19758"
                     /db_xref="CDD:418645"
     Region          968..997
                     /region_name="WH2_INF2"
                     /note="Wiskott Aldrich syndrome homology region 2 (WH2
                     motif) found in Inverted formin-2 (INF2); cd22061"
                     /db_xref="CDD:409204"
     Site            order(974..975,977..979,981..983,988..991)
                     /site_type="other"
                     /note="actin-binding motif [polypeptide binding]"
                     /db_xref="CDD:409204"
     Region          988..991
                     /region_name="actin-binding sequence"
                     /note="actin-binding sequence [structural motif]"
                     /db_xref="CDD:409204"
     Region          1013..>1235
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..1236
                     /gene="INF2"
                     /coded_by="XM_061159539.1:56..3766"
                     /db_xref="GeneID:133068288"
ORIGIN      
        1 mrsqgnaggs prqapawvgr gsrkvlrvwl skmsvkegaq rkwaalkekl gpqdsdptea
       61 nlesaepelc irllqvpsvv nysglrkrle ssdggwmvqf leqsgldlll ealarlsgrg
      121 variadallq ltcvscvrav mnsregiqyi lsnqayvrql slaldtsnmm vkkqvfella
      181 alciyspegh altldaldhy ktvcgqqyrf svimselsds dnvpyvatll svvnaiilgp
      241 edvrtraqlr sefiglqlld vltrlrdled gdlliqletf reakaedeee llrvfggidi
      301 nshqevfsal fhkvscspas vhllsvlqgl lhlepslrss qllwealesl vnravllasd
      361 gqectleemv erllsikgrp rpcsldkahk stqadlgqsq rgsspqnssa ptaglggqqp
      421 aaalasplvt svqgergpap qptaperler pppppapplp dstttppppp pppplppppp
      481 gmgaafpspp ppppppppns agtvpppppl pglggppppp ppppplpgis gppaaggvee
      541 iivaqvdsgl gsawvprhrr vnpptlrmkk lnwqklpssv aregssmwat lsspdaevve
      601 pdfssierlf sfptakpkeq avaparkepk eitfldskks lnlniflkqf kcsneevtam
      661 iragdstkfd vevlkqllkl lpekheienl rsfaedrarl asadqfylll lgipcyqlri
      721 eclllcegta vvldmvrpka qlllaacesl ltshrlpvfc qlilkignfl nygshtgdad
      781 gfkmstllkl tetksqqsrv tllhhvleev eeshpdllql pqdlelpara aginlegiha
      841 esssnlkkll emeqkvsssi pevqeqyahr lqasitdsqa leevfqaieq kqlelasylc
      901 edaqqlsled tlstmktfrd lflralkenk drkeqaakae rrkqqlaeee arrprgeggk
      961 aarrgggkqe evcvidalla dirkgfqlrk targrgdaea asraaatdpp rnkapaatrd
     1021 pvggtsapis epgldaaagr eprgwdlada aptshqptgd ssetggsgpl errsswytda
     1081 sdflptedpq gpqppagaws vvlgdaqalk pldfsdqppk amglsqdtee pmarlgacqa
     1141 kadstgegle daaahgrrag lpaagpdeae dgeltapdsa ldtsldrsfs edavtdssgs
     1201 stlpraqgrt skgtgkrrkk rpsrnqeglr prsrak
//
LOCUS       XP_061015523            1213 aa            linear   MAM 02-DEC-2023
DEFINITION  inverted formin-2 isoform X3 [Dama dama].
ACCESSION   XP_061015523
VERSION     XP_061015523.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159540.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1213
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1213
                     /product="inverted formin-2 isoform X3"
                     /calculated_mol_wt=130919
     Region          <8..152
                     /region_name="Drf_GBD"
                     /note="Diaphanous GTPase-binding Domain; pfam06371"
                     /db_xref="CDD:461886"
     Region          156..341
                     /region_name="Drf_FH3"
                     /note="Diaphanous FH3 Domain; pfam06367"
                     /db_xref="CDD:461885"
     Region          526..895
                     /region_name="FH2"
                     /note="Formin Homology 2 Domain; cl19758"
                     /db_xref="CDD:418645"
     Region          936..965
                     /region_name="WH2_INF2"
                     /note="Wiskott Aldrich syndrome homology region 2 (WH2
                     motif) found in Inverted formin-2 (INF2); cd22061"
                     /db_xref="CDD:409204"
     Site            order(942..943,945..947,949..951,956..959)
                     /site_type="other"
                     /note="actin-binding motif [polypeptide binding]"
                     /db_xref="CDD:409204"
     Region          956..959
                     /region_name="actin-binding sequence"
                     /note="actin-binding sequence [structural motif]"
                     /db_xref="CDD:409204"
     CDS             1..1213
                     /gene="INF2"
                     /coded_by="XM_061159540.1:142..3783"
                     /db_xref="GeneID:133068288"
ORIGIN      
        1 msvkegaqrk waalkeklgp qdsdpteanl esaepelcir llqvpsvvny sglrkrless
       61 dggwmvqfle qsgldlllea larlsgrgva riadallqlt cvscvravmn sregiqyils
      121 nqayvrqlsl aldtsnmmvk kqvfellaal ciyspeghal tldaldhykt vcgqqyrfsv
      181 imselsdsdn vpyvatllsv vnaiilgped vrtraqlrse figlqlldvl trlrdledgd
      241 lliqletfre akaedeeell rvfggidins hqevfsalfh kvscspasvh llsvlqgllh
      301 lepslrssql lwealeslvn ravllasdgq ectleemver llsikgrprp csldkahkst
      361 qadlgqsqrg sspqnssapt aglggqqpaa alasplvtsv qgergpapqp taperlerpp
      421 pppapplpds tttppppppp pplpppppgm gaafpspppp ppppppnsag tvppppplpg
      481 lggppppppp ppplpgisgp paaggveeii vaqvdsglgs awvprhrrvn pptlrmkkln
      541 wqklpssvar egssmwatls spdaevvepd fssierlfsf ptakpkeqav aparkepkei
      601 tfldskksln lniflkqfkc sneevtamir agdstkfdve vlkqllkllp ekheienlrs
      661 faedrarlas adqfyllllg ipcyqlriec lllcegtavv ldmvrpkaql llaacesllt
      721 shrlpvfcql ilkignflny gshtgdadgf kmstllklte tksqqsrvtl lhhvleevee
      781 shpdllqlpq dlelparaag inlegihaes ssnlkkllem eqkvsssipe vqeqyahrlq
      841 asitdsqale evfqaieqkq lelasylced aqqlsledtl stmktfrdlf lralkenkdr
      901 keqaakaerr kqqlaeeear rprgeggkaa rrgggkqeev cvidalladi rkgfqlrkta
      961 rgrgdaeaas raaatdpprn kapaatrdpv ggtsapisep gldaaagrep rgwdladaap
     1021 tshqptgdss etggsgpler rsswytdasd flptedpqgp qppagawsvv lgdaqalkpl
     1081 dfsdqppkam glsqdteepm arlgacqaka dstgegleda aahgrraglp aagpdeaedg
     1141 eltapdsald tsldrsfsed avtdssgsst lpraqgrtsk gtgkrrkkrp srnqeevapd
     1201 pdanktkrlc viq
//
LOCUS       XP_061015524             457 aa            linear   MAM 02-DEC-2023
DEFINITION  adenylosuccinate synthetase isozyme 1 [Dama dama].
ACCESSION   XP_061015524
VERSION     XP_061015524.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159541.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..457
                     /product="adenylosuccinate synthetase isozyme 1"
                     /calculated_mol_wt=50053
     Region          35..454
                     /region_name="Adenylsucc_synt"
                     /note="Adenylosuccinate synthetase; pfam00709"
                     /db_xref="CDD:459912"
     CDS             1..457
                     /gene="ADSS1"
                     /coded_by="XM_061159541.1:68..1441"
                     /db_xref="GeneID:133068289"
ORIGIN      
        1 msgtrasndr ppsaggvkrg rlqheaattg srvtvvlgaq wgdegkgkvv dllatdadii
       61 srcqggnnag htvvvdgkey dfhllpsgii ntkavsfign gvvvhlpglf eeaeknekkg
      121 lkdwekrlii sdrahlvfdf hqavdglqev qrqaqegkni gttrkgigpa ysskaartgl
      181 ricdllsdfd efstrfknla qqhqsmfpsl eidvegqlkr lkgfaerirp mvrdgvyfmy
      241 ealhgapkki lveganaall didfgtypfv tssnctvggv ctglgippqn igevygvvka
      301 yttrvgigaf pteqineigd llqsrghewg vttgrkrrcg wldlmilrya hmvngftala
      361 ltkldildtl deikvgvayk lggkripyfp anqeilqkve veyetlpgwk adttgarkwe
      421 dlppqaqsyi rfvenhvgva vkwvgvgksr dsmiqlf
//
LOCUS       XP_061015525             480 aa            linear   MAM 02-DEC-2023
DEFINITION  RAC-alpha serine/threonine-protein kinase [Dama dama].
ACCESSION   XP_061015525
VERSION     XP_061015525.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159542.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..480
                     /product="RAC-alpha serine/threonine-protein kinase"
                     /calculated_mol_wt=55600
     Region          4..111
                     /region_name="PH_PKB"
                     /note="Protein Kinase B-like pleckstrin homology (PH)
                     domain; cd01241"
                     /db_xref="CDD:269947"
     Site            order(14,16..19,23,25,52..53,55,86)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:269947"
     Region          124..479
                     /region_name="STKc_PKB_alpha"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Protein Kinase B alpha (also called Akt1); cd05594"
                     /db_xref="CDD:270746"
     Site            order(156..157,159..160,164,177,179,191,194,211,227..230,
                     234,236,240,274,276,278..279,281,291..292,295,309..316,
                     341,347,350,438,442)
                     /site_type="active"
                     /db_xref="CDD:270746"
     Site            order(156..157,159,164,177,179,211,227..230,234,274,276,
                     278..279,281,291..292,438)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270746"
     Site            order(160,191,194,234,236,240,274,276,278,295,309..316,
                     341,347,350,442)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270746"
     Site            291..314
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270746"
     Site            450
                     /site_type="other"
                     /note="turn motif phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:270746"
     Site            469..474
                     /site_type="other"
                     /note="hydrophobic motif (HM)"
                     /db_xref="CDD:270746"
     CDS             1..480
                     /gene="AKT1"
                     /coded_by="XM_061159542.1:196..1638"
                     /db_xref="GeneID:133068290"
ORIGIN      
        1 mndvaivkeg wlhkrgeyik twrpryfllk ndgtfigyke rpqdleqres plnnfsvaqc
       61 qlmkterprp ntfiirclqw ttviertfhv etpeereewt taiqtvadgl krqeeetmdf
      121 rsgspgessg aeemevslak pkhrvtmnef eylkllgkgt fgkvilvkek atgryyamki
      181 lkkevivakd evahtltenr vlqnsrhpfl talkysfqth drlcfvmeya nggelffhls
      241 rervfpedra rfygaeivsa ldylhseknv vyrdlklenl mldkdghiki tdfglckegi
      301 kdgatmktfc gtpeylapev ledndygrav dwwglgvvmy emmcgrlpfy nqdheklfel
      361 ilmeeirfpr tlspeaksll sgllkkdpkq rlgggsedak eimqhrffas ivwqdvyekk
      421 lsppfkpqvt setdtryfde eftaqmitit ppdqddsmeg ldserrphfp qfsysasgta
//
LOCUS       XP_061015526             480 aa            linear   MAM 02-DEC-2023
DEFINITION  RAC-alpha serine/threonine-protein kinase [Dama dama].
ACCESSION   XP_061015526
VERSION     XP_061015526.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159543.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..480
                     /product="RAC-alpha serine/threonine-protein kinase"
                     /calculated_mol_wt=55600
     Region          4..111
                     /region_name="PH_PKB"
                     /note="Protein Kinase B-like pleckstrin homology (PH)
                     domain; cd01241"
                     /db_xref="CDD:269947"
     Site            order(14,16..19,23,25,52..53,55,86)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:269947"
     Region          124..479
                     /region_name="STKc_PKB_alpha"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Protein Kinase B alpha (also called Akt1); cd05594"
                     /db_xref="CDD:270746"
     Site            order(156..157,159..160,164,177,179,191,194,211,227..230,
                     234,236,240,274,276,278..279,281,291..292,295,309..316,
                     341,347,350,438,442)
                     /site_type="active"
                     /db_xref="CDD:270746"
     Site            order(156..157,159,164,177,179,211,227..230,234,274,276,
                     278..279,281,291..292,438)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270746"
     Site            order(160,191,194,234,236,240,274,276,278,295,309..316,
                     341,347,350,442)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270746"
     Site            291..314
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270746"
     Site            450
                     /site_type="other"
                     /note="turn motif phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:270746"
     Site            469..474
                     /site_type="other"
                     /note="hydrophobic motif (HM)"
                     /db_xref="CDD:270746"
     CDS             1..480
                     /gene="AKT1"
                     /coded_by="XM_061159543.1:299..1741"
                     /db_xref="GeneID:133068290"
ORIGIN      
        1 mndvaivkeg wlhkrgeyik twrpryfllk ndgtfigyke rpqdleqres plnnfsvaqc
       61 qlmkterprp ntfiirclqw ttviertfhv etpeereewt taiqtvadgl krqeeetmdf
      121 rsgspgessg aeemevslak pkhrvtmnef eylkllgkgt fgkvilvkek atgryyamki
      181 lkkevivakd evahtltenr vlqnsrhpfl talkysfqth drlcfvmeya nggelffhls
      241 rervfpedra rfygaeivsa ldylhseknv vyrdlklenl mldkdghiki tdfglckegi
      301 kdgatmktfc gtpeylapev ledndygrav dwwglgvvmy emmcgrlpfy nqdheklfel
      361 ilmeeirfpr tlspeaksll sgllkkdpkq rlgggsedak eimqhrffas ivwqdvyekk
      421 lsppfkpqvt setdtryfde eftaqmitit ppdqddsmeg ldserrphfp qfsysasgta
//
LOCUS       XP_061015527             424 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger and BTB domain-containing protein 42 isoform X1 [Dama
            dama].
ACCESSION   XP_061015527
VERSION     XP_061015527.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159544.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..424
                     /product="zinc finger and BTB domain-containing protein 42
                     isoform X1"
                     /calculated_mol_wt=46065
     Region          1..129
                     /region_name="BTB_POZ_ZBTB42"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in zinc finger and
                     BTB domain-containing protein 42 (ZBTB42); cd18956"
                     /db_xref="CDD:349737"
     Region          <117..275
                     /region_name="PHA03378"
                     /note="EBNA-3B; Provisional"
                     /db_xref="CDD:223065"
     Region          298..318
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          338..>392
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          338..358
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(343,345,347,349..350,353..354,357,371,373,377..378,
                     381..382,385,399,401,403,405..406,409..410)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          351..373
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          366..386
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(366,369,382,386)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          394..412
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..424
                     /gene="ZBTB42"
                     /coded_by="XM_061159544.1:12..1286"
                     /db_xref="GeneID:133068292"
ORIGIN      
        1 mefpehggrl lgrlrqqrel gflcdctvlv gdarfpahra vlaacsvyfh lfyrdrpggs
       61 rdtvrlngdi vtapafgrll dfmyegrldl rslpvedvla aasylhmydi vkvcknrlre
      121 keralppetp asgaelpgrp pgplsawapa pppaslkarl ppagpkatrp ppapgpppwq
      181 apgesdrald lslkpgpkrp pvcppcvlqt apcrqkqpgt qpvvkeepas esepedgcss
      241 prsahsplrp pgvpaaepla rglgplpvrg vgrgalgpea ehgaleaalr psgrlclcpl
      301 cgklfpgahv lqphlsahfr erdggrarls pdgaaptcpl crktfsctyt lkrherthsg
      361 ekpytcvqcg ksfqyshnls rhavvhtrek phacrwcerr ftqsgdlyrh vrkfhcglvk
      421 sllv
//
LOCUS       XP_061015528             379 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger and BTB domain-containing protein 42 isoform X2 [Dama
            dama].
ACCESSION   XP_061015528
VERSION     XP_061015528.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159545.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..379
                     /product="zinc finger and BTB domain-containing protein 42
                     isoform X2"
                     /calculated_mol_wt=40874
     Region          <9..84
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          253..273
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          293..>347
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          293..313
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(298,300,302,304..305,308..309,312,326,328,332..333,
                     336..337,340,354,356,358,360..361,364..365)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          306..328
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          321..341
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(321,324,337,341)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          349..367
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..379
                     /gene="ZBTB42"
                     /coded_by="XM_061159545.1:129..1268"
                     /db_xref="GeneID:133068292"
ORIGIN      
        1 mggtprmkrd rpggsrdtvr lngdivtapa fgrlldfmye grldlrslpv edvlaaasyl
       61 hmydivkvck nrlrekeral ppetpasgae lpgrppgpls awapapppas lkarlppagp
      121 katrpppapg pppwqapges draldlslkp gpkrppvcpp cvlqtapcrq kqpgtqpvvk
      181 eepasesepe dgcssprsah splrppgvpa aeplarglgp lpvrgvgrga lgpeaehgal
      241 eaalrpsgrl clcplcgklf pgahvlqphl sahfrerdgg rarlspdgaa ptcplcrktf
      301 sctytlkrhe rthsgekpyt cvqcgksfqy shnlsrhavv htrekphacr wcerrftqsg
      361 dlyrhvrkfh cglvksllv
//
LOCUS       XP_061015529            1612 aa            linear   MAM 02-DEC-2023
DEFINITION  centrosomal protein of 170 kDa protein B isoform X1 [Dama dama].
ACCESSION   XP_061015529
VERSION     XP_061015529.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159546.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1612
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1612
                     /product="centrosomal protein of 170 kDa protein B isoform
                     X1"
                     /calculated_mol_wt=172700
     Region          <49..120
                     /region_name="FHA"
                     /note="forkhead associated (FHA) domain superfamily;
                     cl00062"
                     /db_xref="CDD:469597"
     Region          <445..861
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          859..1552
                     /region_name="CEP170_C"
                     /note="CEP170 C-terminus; pfam15308"
                     /db_xref="CDD:464633"
     CDS             1..1612
                     /gene="CEP170B"
                     /coded_by="XM_061159546.1:149..4987"
                     /db_xref="GeneID:133068293"
ORIGIN      
        1 mgsdalcrdr qplgragrpv lalpdraerd pvtsslalsp gverlqldhs rsvdkqhavi
       61 nydqdrdehw vkdlgslngt fvndvripdq ryitlklndv irfgydpnmy vlervqhrvp
      121 eealrhekyt sqlqvsvktp apkrpeavpe qvpyceastp rpergdrrpg peaasyrtpl
      181 ygqpswwged dggalpedrr qdepcperpk dlaqqdgdlt gtpagfraps epqvysfrre
      241 psyfeiptke vppprppeap aheaptreae pggggaapvq shacftiefd dcspgklkik
      301 dhvtkflrqr rppgkeaapa evvsaetkva dwlvqndpsl lpragpgddr hstksdlpvh
      361 trtlkghkhe dgtqsdsedp lakvagapgv paeaggdqar lqrqikrdpq ellhnqqafv
      421 ieffdedtpr kkrsqsftht ppgdprldrr rgpapadrdr paapapargt gsgsgpqrag
      481 slkrekteer lgspspaara parpfgsvgr rsrlaqdfaa qclrdsspaa rpgpekappt
      541 lpapltprga spaapspppp ppadpqvtka rkqeeddsls dagtytiete aqdqeveear
      601 kmidqvfgvl espelsrass atfrpvirgd reelgdgvaq rmallqefas rptgvtpqve
      661 lqglpvpgsp ggqkwvsrwa sladsysdpg lsedgpgrra aelegippar prrllpqlps
      721 dradspagpe varrsgpgpp evggeqagll lgqedlepds lsdasgsdgg rgpepgggpq
      781 eerrrspqeg pvwtrgrrsp rgpgepapts ffigdpsaev vlprkapaap gqvegpgraq
      841 psaptpapar dgtyvsasgr mviqlqttgk ppelegpapt ppkealafvr qesftkepas
      901 spavpgqlpq ipshpllqdl vaaraarmdl hsqdthlilk etetalaale arllskslee
      961 pegevgsapg ppedslsgds dvdtastvsl lsgkngpspt gsqpaglqre kppspaaaqd
     1021 pggvglssar erlsekqrrp lgpvdagrge parrlaarrg hgprgsldwp dedrgsslah
     1081 ppgtdtvtsd hetpgttgaa rpgtrrkpma pppptaaare eqgrsstsvq kaqqaltrsn
     1141 slstpratra srlrrarlgd asdtetadge rgppanpepa grlaaeqakk lsrldilamp
     1201 rkragsftgp sdsdhapsra gfsgrsvely cpgrkpamma earptarkaa natavprqpf
     1261 srarpgsary sspntrrrqq gsdctstsee eygshhsspk htrsrastat qtpraggsgr
     1321 arprapglrd tddedeepdp ygfivqtaei aeiarlsqtl vkdvatlare ihdvagdgds
     1381 pgspgparsp slnnvpstpa stisareelv qripeaslnf qkvppgslgp rdldqnmndr
     1441 gedalanktr prnreevifd nlmlnpvsql sqairenteh laekmkilfq nsgrawedle
     1501 arinaenevp ilktsnkeis silkelrrvq kqlevinaiv dpsgnldllt gnrgpvgsaq
     1561 lgrgraaaqg lcspssalpp rsfpqrtscg tpglpeppfr pdflpdaekf li
//
LOCUS       XP_061015531            1602 aa            linear   MAM 02-DEC-2023
DEFINITION  centrosomal protein of 170 kDa protein B isoform X2 [Dama dama].
ACCESSION   XP_061015531
VERSION     XP_061015531.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159548.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1602
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1602
                     /product="centrosomal protein of 170 kDa protein B isoform
                     X2"
                     /calculated_mol_wt=171906
     Region          5..110
                     /region_name="FHA_Cep170B"
                     /note="forkhead associated (FHA) domain found in
                     centrosomal protein of 170 kDa protein B (Cep170B) and
                     similar proteins; cd22725"
                     /db_xref="CDD:438777"
     Site            order(30..31,44..45,47,66,68..69)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438777"
     Region          <435..851
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          849..1542
                     /region_name="CEP170_C"
                     /note="CEP170 C-terminus; pfam15308"
                     /db_xref="CDD:464633"
     CDS             1..1602
                     /gene="CEP170B"
                     /coded_by="XM_061159548.1:1350..6158"
                     /db_xref="GeneID:133068293"
ORIGIN      
        1 msakmsvtsw flvsssgtrh rlprelifvg rdecelmlqs rsvdkqhavi nydqdrdehw
       61 vkdlgslngt fvndvripdq ryitlklndv irfgydpnmy vlervqhrvp eealrhekyt
      121 sqlqvsvktp apkrpeavpe qvpyceastp rpergdrrpg peaasyrtpl ygqpswwged
      181 dggalpedrr qdepcperpk dlaqqdgdlt gtpagfraps epqvysfrre psyfeiptke
      241 vppprppeap aheaptreae pggggaapvq shacftiefd dcspgklkik dhvtkflrqr
      301 rppgkeaapa evvsaetkva dwlvqndpsl lpragpgddr hstksdlpvh trtlkghkhe
      361 dgtqsdsedp lakvagapgv paeaggdqar lqrqikrdpq ellhnqqafv ieffdedtpr
      421 kkrsqsftht ppgdprldrr rgpapadrdr paapapargt gsgsgpqrag slkrekteer
      481 lgspspaara parpfgsvgr rsrlaqdfaa qclrdsspaa rpgpekappt lpapltprga
      541 spaapspppp ppadpqvtka rkqeeddsls dagtytiete aqdqeveear kmidqvfgvl
      601 espelsrass atfrpvirgd reelgdgvaq rmallqefas rptgvtpqve lqglpvpgsp
      661 ggqkwvsrwa sladsysdpg lsedgpgrra aelegippar prrllpqlps dradspagpe
      721 varrsgpgpp evggeqagll lgqedlepds lsdasgsdgg rgpepgggpq eerrrspqeg
      781 pvwtrgrrsp rgpgepapts ffigdpsaev vlprkapaap gqvegpgraq psaptpapar
      841 dgtyvsasgr mviqlqttgk ppelegpapt ppkealafvr qesftkepas spavpgqlpq
      901 ipshpllqdl vaaraarmdl hsqdthlilk etetalaale arllskslee pegevgsapg
      961 ppedslsgds dvdtastvsl lsgkngpspt gsqpaglqre kppspaaaqd pggvglssar
     1021 erlsekqrrp lgpvdagrge parrlaarrg hgprgsldwp dedrgsslah ppgtdtvtsd
     1081 hetpgttgaa rpgtrrkpma pppptaaare eqgrsstsvq kaqqaltrsn slstpratra
     1141 srlrrarlgd asdtetadge rgppanpepa grlaaeqakk lsrldilamp rkragsftgp
     1201 sdsdhapsra gfsgrsvely cpgrkpamma earptarkaa natavprqpf srarpgsary
     1261 sspntrrrqq gsdctstsee eygshhsspk htrsrastat qtpraggsgr arprapglrd
     1321 tddedeepdp ygfivqtaei aeiarlsqtl vkdvatlare ihdvagdgds pgspgparsp
     1381 slnnvpstpa stisareelv qripeaslnf qkvppgslgp rdldqnmndr gedalanktr
     1441 prnreevifd nlmlnpvsql sqairenteh laekmkilfq nsgrawedle arinaenevp
     1501 ilktsnkeis silkelrrvq kqlevinaiv dpsgnldllt gnrgpvgsaq lgrgraaaqg
     1561 lcspssalpp rsfpqrtscg tpglpeppfr pdflpdaekf li
//
LOCUS       XP_061015532            1602 aa            linear   MAM 02-DEC-2023
DEFINITION  centrosomal protein of 170 kDa protein B isoform X2 [Dama dama].
ACCESSION   XP_061015532
VERSION     XP_061015532.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159549.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1602
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1602
                     /product="centrosomal protein of 170 kDa protein B isoform
                     X2"
                     /calculated_mol_wt=171906
     Region          5..110
                     /region_name="FHA_Cep170B"
                     /note="forkhead associated (FHA) domain found in
                     centrosomal protein of 170 kDa protein B (Cep170B) and
                     similar proteins; cd22725"
                     /db_xref="CDD:438777"
     Site            order(30..31,44..45,47,66,68..69)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438777"
     Region          <435..851
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          849..1542
                     /region_name="CEP170_C"
                     /note="CEP170 C-terminus; pfam15308"
                     /db_xref="CDD:464633"
     CDS             1..1602
                     /gene="CEP170B"
                     /coded_by="XM_061159549.1:107..4915"
                     /db_xref="GeneID:133068293"
ORIGIN      
        1 msakmsvtsw flvsssgtrh rlprelifvg rdecelmlqs rsvdkqhavi nydqdrdehw
       61 vkdlgslngt fvndvripdq ryitlklndv irfgydpnmy vlervqhrvp eealrhekyt
      121 sqlqvsvktp apkrpeavpe qvpyceastp rpergdrrpg peaasyrtpl ygqpswwged
      181 dggalpedrr qdepcperpk dlaqqdgdlt gtpagfraps epqvysfrre psyfeiptke
      241 vppprppeap aheaptreae pggggaapvq shacftiefd dcspgklkik dhvtkflrqr
      301 rppgkeaapa evvsaetkva dwlvqndpsl lpragpgddr hstksdlpvh trtlkghkhe
      361 dgtqsdsedp lakvagapgv paeaggdqar lqrqikrdpq ellhnqqafv ieffdedtpr
      421 kkrsqsftht ppgdprldrr rgpapadrdr paapapargt gsgsgpqrag slkrekteer
      481 lgspspaara parpfgsvgr rsrlaqdfaa qclrdsspaa rpgpekappt lpapltprga
      541 spaapspppp ppadpqvtka rkqeeddsls dagtytiete aqdqeveear kmidqvfgvl
      601 espelsrass atfrpvirgd reelgdgvaq rmallqefas rptgvtpqve lqglpvpgsp
      661 ggqkwvsrwa sladsysdpg lsedgpgrra aelegippar prrllpqlps dradspagpe
      721 varrsgpgpp evggeqagll lgqedlepds lsdasgsdgg rgpepgggpq eerrrspqeg
      781 pvwtrgrrsp rgpgepapts ffigdpsaev vlprkapaap gqvegpgraq psaptpapar
      841 dgtyvsasgr mviqlqttgk ppelegpapt ppkealafvr qesftkepas spavpgqlpq
      901 ipshpllqdl vaaraarmdl hsqdthlilk etetalaale arllskslee pegevgsapg
      961 ppedslsgds dvdtastvsl lsgkngpspt gsqpaglqre kppspaaaqd pggvglssar
     1021 erlsekqrrp lgpvdagrge parrlaarrg hgprgsldwp dedrgsslah ppgtdtvtsd
     1081 hetpgttgaa rpgtrrkpma pppptaaare eqgrsstsvq kaqqaltrsn slstpratra
     1141 srlrrarlgd asdtetadge rgppanpepa grlaaeqakk lsrldilamp rkragsftgp
     1201 sdsdhapsra gfsgrsvely cpgrkpamma earptarkaa natavprqpf srarpgsary
     1261 sspntrrrqq gsdctstsee eygshhsspk htrsrastat qtpraggsgr arprapglrd
     1321 tddedeepdp ygfivqtaei aeiarlsqtl vkdvatlare ihdvagdgds pgspgparsp
     1381 slnnvpstpa stisareelv qripeaslnf qkvppgslgp rdldqnmndr gedalanktr
     1441 prnreevifd nlmlnpvsql sqairenteh laekmkilfq nsgrawedle arinaenevp
     1501 ilktsnkeis silkelrrvq kqlevinaiv dpsgnldllt gnrgpvgsaq lgrgraaaqg
     1561 lcspssalpp rsfpqrtscg tpglpeppfr pdflpdaekf li
//
LOCUS       XP_061015533            1567 aa            linear   MAM 02-DEC-2023
DEFINITION  centrosomal protein of 170 kDa protein B isoform X3 [Dama dama].
ACCESSION   XP_061015533
VERSION     XP_061015533.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159550.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1567
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1567
                     /product="centrosomal protein of 170 kDa protein B isoform
                     X3"
                     /calculated_mol_wt=167991
     Region          5..110
                     /region_name="FHA_Cep170B"
                     /note="forkhead associated (FHA) domain found in
                     centrosomal protein of 170 kDa protein B (Cep170B) and
                     similar proteins; cd22725"
                     /db_xref="CDD:438777"
     Site            order(30..31,44..45,47,66,68..69)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438777"
     Region          <435..851
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          849..1507
                     /region_name="CEP170_C"
                     /note="CEP170 C-terminus; pfam15308"
                     /db_xref="CDD:464633"
     CDS             1..1567
                     /gene="CEP170B"
                     /coded_by="XM_061159550.1:1349..6052"
                     /db_xref="GeneID:133068293"
ORIGIN      
        1 msakmsvtsw flvsssgtrh rlprelifvg rdecelmlqs rsvdkqhavi nydqdrdehw
       61 vkdlgslngt fvndvripdq ryitlklndv irfgydpnmy vlervqhrvp eealrhekyt
      121 sqlqvsvktp apkrpeavpe qvpyceastp rpergdrrpg peaasyrtpl ygqpswwged
      181 dggalpedrr qdepcperpk dlaqqdgdlt gtpagfraps epqvysfrre psyfeiptke
      241 vppprppeap aheaptreae pggggaapvq shacftiefd dcspgklkik dhvtkflrqr
      301 rppgkeaapa evvsaetkva dwlvqndpsl lpragpgddr hstksdlpvh trtlkghkhe
      361 dgtqsdsedp lakvagapgv paeaggdqar lqrqikrdpq ellhnqqafv ieffdedtpr
      421 kkrsqsftht ppgdprldrr rgpapadrdr paapapargt gsgsgpqrag slkrekteer
      481 lgspspaara parpfgsvgr rsrlaqdfaa qclrdsspaa rpgpekappt lpapltprga
      541 spaapspppp ppadpqvtka rkqeeddsls dagtytiete aqdqeveear kmidqvfgvl
      601 espelsrass atfrpvirgd reelgdgvaq rmallqefas rptgvtpqve lqglpvpgsp
      661 ggqkwvsrwa sladsysdpg lsedgpgrra aelegippar prrllpqlps dradspagpe
      721 varrsgpgpp evggeqagll lgqedlepds lsdasgsdgg rgpepgggpq eerrrspqeg
      781 pvwtrgrrsp rgpgepapts ffigdpsaev vlprkapaap gqvegpgraq psaptpapar
      841 dgtyvsasgr mviqlqttgk ppelegpapt ppkealafvr qesftkepas spavpgqlpq
      901 ipshpllqdl vaaraarmdl hsqdthlilk etetalaale arllskslee pegevgsapg
      961 ppedslsgds dvdtastvsl lsgkngpspt gsqpaglqre kppspaaaqd pggvglssar
     1021 erlsekqrrp lgpvdagrge parrlaarrg hgprgsldwp dedrgsslah ppgtdtvtsd
     1081 hetpgttgaa rpgtrrkpma pppptaaare eqgrsstsvq kaqqaltrsn slstpratra
     1141 srlrrarlgd asdtetadge rgppanpepa grlaaeqakk lsrldilamp rkragsftgp
     1201 sdsdhapsra gfsgrsvely cpgrkpamma earptarkaa natavprqpf srarpgsary
     1261 sspttqtpra ggsgrarpra pglrdtdded eepdpygfiv qtaeiaeiar lsqtlvkdva
     1321 tlareihdva gdgdspgspg parspslnnv pstpastisa reelvqripe aslnfqkvpp
     1381 gslgprdldq nmndrgedal anktrprnre evifdnlmln pvsqlsqair entehlaekm
     1441 kilfqnsgra wedlearina enevpilkts nkeissilke lrrvqkqlev inaivdpsgn
     1501 ldlltgnrgp vgsaqlgrgr aaaqglcsps salpprsfpq rtscgtpglp eppfrpdflp
     1561 daekfli
//
LOCUS       XP_061015534             558 aa            linear   MAM 02-DEC-2023
DEFINITION  5'-3' exonuclease PLD4 isoform X1 [Dama dama].
ACCESSION   XP_061015534
VERSION     XP_061015534.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159551.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..558
                     /product="5'-3' exonuclease PLD4 isoform X1"
                     /calculated_mol_wt=61209
     Region          121..318
                     /region_name="PLDc_SF"
                     /note="Catalytic domain of phospholipase D superfamily
                     proteins; cl15239"
                     /db_xref="CDD:472788"
     Site            order(265,267,280,282,293)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197243"
     Site            265
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:197243"
     Region          355..542
                     /region_name="PLDc_SF"
                     /note="Catalytic domain of phospholipase D superfamily
                     proteins; cl15239"
                     /db_xref="CDD:472788"
     Site            order(479,481,493,495,503)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197246"
     Site            479
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:197246"
     CDS             1..558
                     /gene="PLD4"
                     /coded_by="XM_061159551.1:13..1689"
                     /db_xref="GeneID:133068294"
ORIGIN      
        1 mqdeeevarr gssklqrggr weviavmack lracvcgeak mnakagpsel qvrgtlvllc
       61 lgavtltcll glgsspsaws rgcleegpar pgglgsrvdw dppggearrr hqqndscrlv
      121 lvesipqdlw saagspaaqp laqawmqlld aaresvhvas fywsltgpdi gvndsssqpg
      181 eallqklqql ldrnvslava tstptpakns tdlqvletrv gvrtpsmkrt avrrkelgsa
      241 hhpaplsgaq vrrvpmgrlt ggvlhskfwv vdgqhvyvgs anmdwrsltq vkelgaviyn
      301 csrlaqdlek tfqtywvlga pravlpkpwp rnfsshvnrf qplrdrfdgv pttayfsasp
      361 palcphgrtr dldallavmg aaqeflyasv meyfpttrfr hparywpvld talrvaafsr
      421 gvrvrllvsc wlntdprmfp flrslqalsn paanvsldvk vfivpvgnhs nipfsrvnhs
      481 kfmvtekaay igtsnwsedy fsstsgvglv vsqrapgtpp rvstvqeqlr qlferdwnsr
      541 yavgldgraq gqdciwqg
//
LOCUS       XP_061015535             530 aa            linear   MAM 02-DEC-2023
DEFINITION  5'-3' exonuclease PLD4 isoform X2 [Dama dama].
ACCESSION   XP_061015535
VERSION     XP_061015535.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159552.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..530
                     /product="5'-3' exonuclease PLD4 isoform X2"
                     /calculated_mol_wt=58188
     Region          121..290
                     /region_name="PLDc_SF"
                     /note="Catalytic domain of phospholipase D superfamily
                     proteins; cl15239"
                     /db_xref="CDD:472788"
     Site            order(237,239,252,254,265)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197243"
     Site            237
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:197243"
     Region          327..514
                     /region_name="PLDc_SF"
                     /note="Catalytic domain of phospholipase D superfamily
                     proteins; cl15239"
                     /db_xref="CDD:472788"
     Site            order(451,453,465,467,475)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197246"
     Site            451
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:197246"
     CDS             1..530
                     /gene="PLD4"
                     /coded_by="XM_061159552.1:13..1605"
                     /db_xref="GeneID:133068294"
ORIGIN      
        1 mqdeeevarr gssklqrggr weviavmack lracvcgeak mnakagpsel qvrgtlvllc
       61 lgavtltcll glgsspsaws rgcleegpar pgglgsrvdw dppggearrr hqqndscrlv
      121 lvesipqdlw saagspaaqp laqawmqlld aaresvhvas fywsltgpdi gvndsssqpg
      181 eallqklqql ldrnvslava tstptpakns tdlqvletrg aqvrrvpmgr ltggvlhskf
      241 wvvdgqhvyv gsanmdwrsl tqvkelgavi yncsrlaqdl ektfqtywvl gapravlpkp
      301 wprnfsshvn rfqplrdrfd gvpttayfsa sppalcphgr trdldallav mgaaqeflya
      361 svmeyfpttr frhparywpv ldtalrvaaf srgvrvrllv scwlntdprm fpflrslqal
      421 snpaanvsld vkvfivpvgn hsnipfsrvn hskfmvteka ayigtsnwse dyfsstsgvg
      481 lvvsqrapgt pprvstvqeq lrqlferdwn sryavgldgr aqgqdciwqg
//
LOCUS       XP_061015536             372 aa            linear   MAM 02-DEC-2023
DEFINITION  probable G-protein coupled receptor 132 [Dama dama].
ACCESSION   XP_061015536
VERSION     XP_061015536.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159553.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..372
                     /product="probable G-protein coupled receptor 132"
                     /calculated_mol_wt=40850
     Region          34..310
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          36..60
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          69..90
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          107..129
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          152..168
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          188..211
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          232..254
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          278..303
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..372
                     /gene="GPR132"
                     /coded_by="XM_061159553.1:303..1421"
                     /db_xref="GeneID:133068295"
ORIGIN      
        1 mpgnatletg palgalstgv sshtcnvpfn dsrvflmtvy sgvcmlglpa ncltawltll
       61 qarqghvlav ylfclalcel lyvstlplwv vyiqhghrwp lsplackvta yiffcnlyis
      121 ilflcciscd rflavvyale trgrrhqkta ilisatvfll vglvhspvfk mehnetcfet
      181 lpmdhkvagy yyarfmvgfa vplsiiavtn qrifrtiqls tslsaaqkar vrllaiavvv
      241 iflvcfapyh lvllikaiaf syhrgaeepv cdfeirlyta svvflslatv nsvadpiiyv
      301 latevtrqev crihkgwkkw stktddtkla cskdseeaqs pmsptnsyaf pgpvhppgps
      361 pgtpeglaeg sc
//
LOCUS       XP_061015537             372 aa            linear   MAM 02-DEC-2023
DEFINITION  probable G-protein coupled receptor 132 [Dama dama].
ACCESSION   XP_061015537
VERSION     XP_061015537.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159554.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..372
                     /product="probable G-protein coupled receptor 132"
                     /calculated_mol_wt=40850
     Region          34..310
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          36..60
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          69..90
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          107..129
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          152..168
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          188..211
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          232..254
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          278..303
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..372
                     /gene="GPR132"
                     /coded_by="XM_061159554.1:124..1242"
                     /db_xref="GeneID:133068295"
ORIGIN      
        1 mpgnatletg palgalstgv sshtcnvpfn dsrvflmtvy sgvcmlglpa ncltawltll
       61 qarqghvlav ylfclalcel lyvstlplwv vyiqhghrwp lsplackvta yiffcnlyis
      121 ilflcciscd rflavvyale trgrrhqkta ilisatvfll vglvhspvfk mehnetcfet
      181 lpmdhkvagy yyarfmvgfa vplsiiavtn qrifrtiqls tslsaaqkar vrllaiavvv
      241 iflvcfapyh lvllikaiaf syhrgaeepv cdfeirlyta svvflslatv nsvadpiiyv
      301 latevtrqev crihkgwkkw stktddtkla cskdseeaqs pmsptnsyaf pgpvhppgps
      361 pgtpeglaeg sc
//
LOCUS       XP_061015538             372 aa            linear   MAM 02-DEC-2023
DEFINITION  probable G-protein coupled receptor 132 [Dama dama].
ACCESSION   XP_061015538
VERSION     XP_061015538.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159555.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..372
                     /product="probable G-protein coupled receptor 132"
                     /calculated_mol_wt=40850
     Region          34..310
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          36..60
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          69..90
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          107..129
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          152..168
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          188..211
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          232..254
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          278..303
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..372
                     /gene="GPR132"
                     /coded_by="XM_061159555.1:224..1342"
                     /db_xref="GeneID:133068295"
ORIGIN      
        1 mpgnatletg palgalstgv sshtcnvpfn dsrvflmtvy sgvcmlglpa ncltawltll
       61 qarqghvlav ylfclalcel lyvstlplwv vyiqhghrwp lsplackvta yiffcnlyis
      121 ilflcciscd rflavvyale trgrrhqkta ilisatvfll vglvhspvfk mehnetcfet
      181 lpmdhkvagy yyarfmvgfa vplsiiavtn qrifrtiqls tslsaaqkar vrllaiavvv
      241 iflvcfapyh lvllikaiaf syhrgaeepv cdfeirlyta svvflslatv nsvadpiiyv
      301 latevtrqev crihkgwkkw stktddtkla cskdseeaqs pmsptnsyaf pgpvhppgps
      361 pgtpeglaeg sc
//
LOCUS       XP_061015539             372 aa            linear   MAM 02-DEC-2023
DEFINITION  probable G-protein coupled receptor 132 [Dama dama].
ACCESSION   XP_061015539
VERSION     XP_061015539.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159556.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..372
                     /product="probable G-protein coupled receptor 132"
                     /calculated_mol_wt=40850
     Region          34..310
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          36..60
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          69..90
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          107..129
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          152..168
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          188..211
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          232..254
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          278..303
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..372
                     /gene="GPR132"
                     /coded_by="XM_061159556.1:116..1234"
                     /db_xref="GeneID:133068295"
ORIGIN      
        1 mpgnatletg palgalstgv sshtcnvpfn dsrvflmtvy sgvcmlglpa ncltawltll
       61 qarqghvlav ylfclalcel lyvstlplwv vyiqhghrwp lsplackvta yiffcnlyis
      121 ilflcciscd rflavvyale trgrrhqkta ilisatvfll vglvhspvfk mehnetcfet
      181 lpmdhkvagy yyarfmvgfa vplsiiavtn qrifrtiqls tslsaaqkar vrllaiavvv
      241 iflvcfapyh lvllikaiaf syhrgaeepv cdfeirlyta svvflslatv nsvadpiiyv
      301 latevtrqev crihkgwkkw stktddtkla cskdseeaqs pmsptnsyaf pgpvhppgps
      361 pgtpeglaeg sc
//
LOCUS       XP_061015540            1239 aa            linear   MAM 02-DEC-2023
DEFINITION  protein jagged-2 [Dama dama].
ACCESSION   XP_061015540
VERSION     XP_061015540.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159557.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1239
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1239
                     /product="protein jagged-2"
                     /calculated_mol_wt=132828
     Region          28..196
                     /region_name="MNNL"
                     /note="N terminus of Notch ligand C2-like domain;
                     pfam07657"
                     /db_xref="CDD:462222"
     Region          178..240
                     /region_name="DSL"
                     /note="delta serrate ligand; smart00051"
                     /db_xref="CDD:128366"
     Region          307..345
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(307,310,325)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          351..381
                     /region_name="EGF"
                     /note="EGF-like domain; pfam00008"
                     /db_xref="CDD:394967"
     Region          385..421
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(385,388,402)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          423..458
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(423,426,440)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          461..496
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(461,464,477)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          500..533
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          535..570
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(535,538,552)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          635..670
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(635,638,652)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          675..708
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          715..745
                     /region_name="EGF"
                     /note="EGF-like domain; pfam00008"
                     /db_xref="CDD:394967"
     Region          756..786
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          <796..823
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          826..862
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(826,829,843)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          871..942
                     /region_name="VWC_out"
                     /note="von Willebrand factor (vWF) type C domain;
                     smart00215"
                     /db_xref="CDD:214565"
     CDS             1..1239
                     /gene="JAG2"
                     /coded_by="XM_061159557.1:1..3720"
                     /db_xref="GeneID:133068298"
ORIGIN      
        1 mrargrgrlp rrlllllalc vqaarpmgyf elqlsalrna ngellsgacc dgggrttrag
       61 gcghdecdty vrvclkeyqa kvtptgpcsy ghgatpvlgg nsfylppaga agdrararar
      121 aggdqdpglv vipfqfawpr sftliveawd wdndttpdee llidrvshag minpedrwks
      181 lrfsghvahl elqirvrcde nyysagcnkf crprndffgh ytcdqygnka cmdgwmgtec
      241 keavckqgcn llhggcsvpg ecrcsygwqg rfcdecvpyp gcvhgscvep wqctcetnwg
      301 gllcnkdlny cgshhpctng gtcinaepdq yrcacpdgys gknceraeha casnpcangg
      361 schevpsgfe chcpsgwsgp tcaldideca snpcaaggtc vdqvdgfecl cpeqwvgatc
      421 qldanecegk pclnafsckn liggyycdcl pgwkganchi nvndcrgqcq hggtckdlvn
      481 gyqcvcprgf ggrhcehqld ecasnpchgg lcedlidgfr chcpqgfsgp lcevdidfce
      541 pspcqngarc ynlegdyyca cpddlggknc seprapcpgg acrvvdgcgf eagtrvagmg
      601 psgvcgphgh cisqpggnfs cvcdsgftgt ycheniddcl gqpcrnggtc idevdafrcf
      661 cpsgwegelc dtnpndclpd pchsrgrcfd lvndfycvcd dgwkgktchs refqcdaytc
      721 snggtcydsg dtfrcacppg wkgstctvak nssclpnpcv nggtcvgsgd sfscicrdgw
      781 egrtcthntn dcnplpcyng gvcvdgvnwf rcecapgfag pdcrinidec qsspcaygat
      841 cvdeingyrc scppgrsglr cqevivfgrs cwsqgvpfph gsswvedcns crcldgrrdc
      901 skvwcgqkpc llagrpdals aqcppgqrcl ekapgqclqp pcaawgacga eepvlpstpc
      961 qprsghldnn carltlrfnr dqvpqgttvg aicsgiralp atravardrl lvllcdrpls
     1021 easavevams fspardlpds sliqsaahai vaaitqrgns slllavtevk vetvvvgrss
     1081 tgllvmvlcg vfsvlclacv vvcvwwtrkr rkerersrlp reegpnnqwa plnpirnpie
     1141 rpggpggpkd tlfpcknftp pprrvgealp gpagggdeee deepgrgede speaekflah
     1201 kftkdpgrsp grparwasgp kvdnravggv saarrasre
//
LOCUS       XP_061015541             697 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor IIIB 90 kDa subunit isoform X1 [Dama dama].
ACCESSION   XP_061015541
VERSION     XP_061015541.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159558.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..697
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..697
                     /product="transcription factor IIIB 90 kDa subunit isoform
                     X1"
                     /calculated_mol_wt=75880
     Region          4..46
                     /region_name="TF_Zn_Ribbon"
                     /note="TFIIB zinc-binding; pfam08271"
                     /db_xref="CDD:400527"
     Region          84..174
                     /region_name="CYCLIN_TFIIIB90_rpt1"
                     /note="first cyclin box found in transcription factor IIIB
                     90 kDa subunit (TFIIIB90) and similar proteins; cd20553"
                     /db_xref="CDD:410256"
     Site            order(85,124..127,161,165,168..169)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410256"
     Region          179..270
                     /region_name="CYCLIN_TFIIIB90_rpt2"
                     /note="second cyclin box found in transcription factor
                     IIIB 90 kDa subunit (TFIIIB90) and similar proteins;
                     cd20554"
                     /db_xref="CDD:410257"
     Site            order(222..224,255..256,258..259)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410257"
     Region          451..547
                     /region_name="BRF1"
                     /note="Brf1-like TBP-binding domain; pfam07741"
                     /db_xref="CDD:462250"
     CDS             1..697
                     /gene="BRF1"
                     /coded_by="XM_061159558.1:37..2130"
                     /db_xref="GeneID:133068299"
ORIGIN      
        1 mtgrvcrgcg gtdieldaar gdavctgcgs vledniivse vqfvensggg ssavgqfvsl
       61 dgagktptlg ggfhvnlgke sraqtlqngr rqihhlgnql qlnqhcldta fnffkmavsk
      121 hltrgrrmah vvaaclylvc rtegtphmll dlsdllqvnv yvlgktflll arelcinapa
      181 idpclyiprf ahllefgekn hevsmtamrl lqrmkrdwmh tgrrpsglcg aallvaarmh
      241 dfrrtvkevi svvkvcestl rkrltefedt ptsqltvdef mkidleeecd ppsytagqrk
      301 lrlkqleqvl skqledvege ittyqdaiei elensrpkak galasltkdg svedstsslf
      361 geedtedeel eaaashlnkd fyqellgggv sggaeaaggp aeggrppale sllgplptaa
      421 slgisdsire cisspnrepk dacgdgeldl sgiddleidr yilneaearv kaelwmrena
      481 eylreqkeke ariakerelg iykehkpkks ckrrepiqas tageaiekml eqkkisskin
      541 ysvlrgldsg ggppgedgpp prehgpppge dtasqgeaar ptertsarrl srrktpsrrs
      601 rpdpstsvgk rlrpmvstqp akkvalgeas vpsarsleae rvrpaavvve sgpvsyhaee
      661 daeeedveee dgepcvsalq mmgsndygcd gddddgy
//
LOCUS       XP_061015542             670 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor IIIB 90 kDa subunit isoform X2 [Dama dama].
ACCESSION   XP_061015542
VERSION     XP_061015542.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159559.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..670
                     /product="transcription factor IIIB 90 kDa subunit isoform
                     X2"
                     /calculated_mol_wt=73159
     Region          4..46
                     /region_name="TF_Zn_Ribbon"
                     /note="TFIIB zinc-binding; pfam08271"
                     /db_xref="CDD:400527"
     Region          62..147
                     /region_name="CYCLIN_TFIIIB90_rpt1"
                     /note="first cyclin box found in transcription factor IIIB
                     90 kDa subunit (TFIIIB90) and similar proteins; cd20553"
                     /db_xref="CDD:410256"
     Site            order(97..100,134,138,141..142)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410256"
     Region          152..243
                     /region_name="CYCLIN_TFIIIB90_rpt2"
                     /note="second cyclin box found in transcription factor
                     IIIB 90 kDa subunit (TFIIIB90) and similar proteins;
                     cd20554"
                     /db_xref="CDD:410257"
     Site            order(195..197,228..229,231..232)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410257"
     Region          424..520
                     /region_name="BRF1"
                     /note="Brf1-like TBP-binding domain; pfam07741"
                     /db_xref="CDD:462250"
     CDS             1..670
                     /gene="BRF1"
                     /coded_by="XM_061159559.1:37..2049"
                     /db_xref="GeneID:133068299"
ORIGIN      
        1 mtgrvcrgcg gtdieldaar gdavctgcgs vledniivse vqfvensggg ssavgqfvsl
       61 dgrrqihhlg nqlqlnqhcl dtafnffkma vskhltrgrr mahvvaacly lvcrtegtph
      121 mlldlsdllq vnvyvlgktf lllarelcin apaidpclyi prfahllefg eknhevsmta
      181 mrllqrmkrd wmhtgrrpsg lcgaallvaa rmhdfrrtvk evisvvkvce stlrkrltef
      241 edtptsqltv defmkidlee ecdppsytag qrklrlkqle qvlskqledv egeittyqda
      301 ieielensrp kakgalaslt kdgsvedsts slfgeedted eeleaaashl nkdfyqellg
      361 ggvsggaeaa ggpaeggrpp alesllgplp taaslgisds irecisspnr epkdacgdge
      421 ldlsgiddle idryilneae arvkaelwmr enaeylreqk ekeariaker elgiykehkp
      481 kksckrrepi qastageaie kmleqkkiss kinysvlrgl dsgggppged gppprehgpp
      541 pgedtasqge aarptertsa rrlsrrktps rrsrpdpsts vgkrlrpmvs tqpakkvalg
      601 easvpsarsl eaervrpaav vvesgpvsyh aeedaeeedv eeedgepcvs alqmmgsndy
      661 gcdgddddgy
//
LOCUS       XP_061015544             493 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor IIIB 90 kDa subunit isoform X3 [Dama dama].
ACCESSION   XP_061015544
VERSION     XP_061015544.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159561.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..493
                     /product="transcription factor IIIB 90 kDa subunit isoform
                     X3"
                     /calculated_mol_wt=53847
     Region          <1..66
                     /region_name="CYCLIN_TFIIIB90_rpt2"
                     /note="second cyclin box found in transcription factor
                     IIIB 90 kDa subunit (TFIIIB90) and similar proteins;
                     cd20554"
                     /db_xref="CDD:410257"
     Site            order(18..20,51..52,54..55)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410257"
     Region          247..343
                     /region_name="BRF1"
                     /note="Brf1-like TBP-binding domain; pfam07741"
                     /db_xref="CDD:462250"
     CDS             1..493
                     /gene="BRF1"
                     /coded_by="XM_061159561.1:194..1675"
                     /db_xref="GeneID:133068299"
ORIGIN      
        1 mtamrllqrm krdwmhtgrr psglcgaall vaarmhdfrr tvkevisvvk vcestlrkrl
       61 tefedtptsq ltvdefmkid leeecdppsy tagqrklrlk qleqvlskql edvegeitty
      121 qdaieielen srpkakgala sltkdgsved stsslfgeed tedeeleaaa shlnkdfyqe
      181 llgggvsgga eaaggpaegg rppalesllg plptaaslgi sdsireciss pnrepkdacg
      241 dgeldlsgid dleidryiln eaearvkael wmrenaeylr eqkekearia kerelgiyke
      301 hkpkksckrr epiqastage aiekmleqkk isskinysvl rgldsgggpp gedgpppreh
      361 gpppgedtas qgeaarpter tsarrlsrrk tpsrrsrpdp stsvgkrlrp mvstqpakkv
      421 algeasvpsa rsleaervrp aavvvesgpv syhaeedaee edveeedgep cvsalqmmgs
      481 ndygcdgddd dgy
//
LOCUS       XP_061015545             540 aa            linear   MAM 02-DEC-2023
DEFINITION  BTB/POZ domain-containing protein 6 [Dama dama].
ACCESSION   XP_061015545
VERSION     XP_061015545.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159562.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..540
                     /product="BTB/POZ domain-containing protein 6"
                     /calculated_mol_wt=58782
     Region          130..238
                     /region_name="BTB_POZ_BTBD6"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in BTB/POZ
                     domain-containing protein 6 (BTBD6); cd18349"
                     /db_xref="CDD:349658"
     Region          238..332
                     /region_name="BACK_BTBD6"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     BTB/POZ domain-containing protein 6 (BTBD6); cd18525"
                     /db_xref="CDD:350600"
     Region          394..539
                     /region_name="PHR"
                     /note="PHR domain; pfam08005"
                     /db_xref="CDD:462339"
     CDS             1..540
                     /gene="BTBD6"
                     /coded_by="XM_061159562.1:16..1638"
                     /db_xref="GeneID:133068300"
ORIGIN      
        1 mllplaclhg rvaqcltall vlaeppprpr rgarahgapp praeaalpak maaelyapas
       61 aaaaaaatat diansnaaaa aaaagrkgrp saplpapppp apappppdnn npespnwqsf
      121 hptlrernal mfnnelmadv hfvvgppgaa rrvpahkyvl avgssvfyam fygdlaevks
      181 eihipdvepa aflillkymy sdeidleadt vlatlyaakk yivpalakac vnfletslea
      241 knacvllsqs rlfeepeltq rcwevidaqa emalrsegfc eidwqtleii vtrealntke
      301 avvfeavlsw aeaeckrqgl pvtprnkrhv lgpalylvri ptmtleefan gaaqsdiltl
      361 eethniflwy taankpllef pltkrkglap qrchrfqssa yrsnqwryrg rcdsiqfavd
      421 rrvfvaglgl ygsssgkaey svkielkrlg vvlaqnltkf vsdgssntfs vwfehpvqve
      481 qdtfytasav ldgselsyfg qegmtevqcg kvtfqfqcss dstngtgvqg gqipelifya
//
LOCUS       XP_061015546             889 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphofurin acidic cluster sorting protein 2 isoform X1 [Dama
            dama].
ACCESSION   XP_061015546
VERSION     XP_061015546.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159563.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..889
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..889
                     /product="phosphofurin acidic cluster sorting protein 2
                     isoform X1"
                     /calculated_mol_wt=97781
     Region          473..885
                     /region_name="Pacs-1"
                     /note="PACS-1 cytosolic sorting protein; pfam10254"
                     /db_xref="CDD:463027"
     CDS             1..889
                     /gene="PACS2"
                     /coded_by="XM_061159563.1:19..2688"
                     /db_xref="GeneID:133068301"
ORIGIN      
        1 maergrlgla gapaalntpv pmnlfatwev dgsspscvpr lcsltlkklv vfkelekeli
       61 svviavkmqg skrilrshei vlppsgqvet dlaltfslqy phflkregnk lqimlqrrkr
      121 yknrtilgyk tlaagsinma evlqqpaegg qvlslcsnik eatvkvaeiw ifslssqpid
      181 hedsamqagp kakstenyse eeyesfsseq easddavqgq dldeddfdvg kpkkqrrsiv
      241 rtpsmtrqqn fkqkvvallr rfkvsdevld seqdpadhvp eveedldlly dtldvenpsd
      301 sgpdmeddds vlstpkpklr pyfeglshss sqteigsihs arsqreppsp advpektrvl
      361 ggkqpsdsvs dsvahstptp geqpappees pevetsaldl fteklppsgr itkteslvip
      421 strsegkqag rrgrstslke rqparpqner ansldnercp dtrsqlqipr ktvydqlnhi
      481 lisddqlpen iilvntsdwq gqflsdvlqr htlpvvctcs aadvqaafst ivsriqrycn
      541 cnsqppppvk iavagaqhyl savlrlfveq lshktpdwlg ymrflviplg shpvarylgs
      601 vdyrynnffq dlawrdlfnk leaqsavqdt pdivsritqy isgancahql piaeamltyk
      661 qkspdeessq kfipfvgvvk vgivepssat sgdsddaaps gssvlsstpp stspaakeas
      721 ptppsspsvs gglsspsqgv gaelmglqvd ywtsaqpadr krdaekkdsp ttkntlkctf
      781 rslqvsrlps sgeaaatptm smtvvtkekn kkvmflpkkt kdkdvesksq ciegisrlic
      841 takhqqnmlr vlidgvewnd vkffqlaaqw sshvkhfpic ifghsksaf
//
LOCUS       XP_061015547             881 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphofurin acidic cluster sorting protein 2 isoform X2 [Dama
            dama].
ACCESSION   XP_061015547
VERSION     XP_061015547.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159564.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..881
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..881
                     /product="phosphofurin acidic cluster sorting protein 2
                     isoform X2"
                     /calculated_mol_wt=96852
     Region          465..877
                     /region_name="Pacs-1"
                     /note="PACS-1 cytosolic sorting protein; pfam10254"
                     /db_xref="CDD:463027"
     CDS             1..881
                     /gene="PACS2"
                     /coded_by="XM_061159564.1:19..2664"
                     /db_xref="GeneID:133068301"
ORIGIN      
        1 maergrlgla gapaalntpv pmnlfatwev dgsspscvpr lcsltlkklv vfkelekeli
       61 svviavkmqg skrilrshei vlppsgqvet dlaltfslqy phflkregnk lqimlqrrkr
      121 yknrtilgyk tlaagsinma evlqqpaegg qvlslcsnik eatvkvaeiw ifslssqpid
      181 hedsamqagp kakstenyse eeyesfsseq easddavqgq dldeddfdvg kpkkqrrsiq
      241 qnfkqkvval lrrfkvsdev ldseqdpadh vpeveedldl lydtldvenp sdsgpdmedd
      301 dsvlstpkpk lrpyfeglsh sssqteigsi hsarsqrepp spadvpektr vlggkqpsds
      361 vsdsvahstp tpgeqpappe espevetsal dlfteklpps gritkteslv ipstrsegkq
      421 agrrgrstsl kerqparpqn eransldner cpdtrsqlqi prktvydqln hilisddqlp
      481 eniilvntsd wqgqflsdvl qrhtlpvvct csaadvqaaf stivsriqry cncnsqpppp
      541 vkiavagaqh ylsavlrlfv eqlshktpdw lgymrflvip lgshpvaryl gsvdyrynnf
      601 fqdlawrdlf nkleaqsavq dtpdivsrit qyisgancah qlpiaeamlt ykqkspdees
      661 sqkfipfvgv vkvgivepss atsgdsddaa psgssvlsst ppstspaake asptppssps
      721 vsgglsspsq gvgaelmglq vdywtsaqpa drkrdaekkd spttkntlkc tfrslqvsrl
      781 pssgeaaatp tmsmtvvtke knkkvmflpk ktkdkdvesk sqciegisrl ictakhqqnm
      841 lrvlidgvew ndvkffqlaa qwsshvkhfp icifghsksa f
//
LOCUS       XP_061015548             754 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphofurin acidic cluster sorting protein 2 isoform X3 [Dama
            dama].
ACCESSION   XP_061015548
VERSION     XP_061015548.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159565.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..754
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..754
                     /product="phosphofurin acidic cluster sorting protein 2
                     isoform X3"
                     /calculated_mol_wt=82492
     Region          473..>718
                     /region_name="Pacs-1"
                     /note="PACS-1 cytosolic sorting protein; pfam10254"
                     /db_xref="CDD:463027"
     CDS             1..754
                     /gene="PACS2"
                     /coded_by="XM_061159565.1:19..2283"
                     /db_xref="GeneID:133068301"
ORIGIN      
        1 maergrlgla gapaalntpv pmnlfatwev dgsspscvpr lcsltlkklv vfkelekeli
       61 svviavkmqg skrilrshei vlppsgqvet dlaltfslqy phflkregnk lqimlqrrkr
      121 yknrtilgyk tlaagsinma evlqqpaegg qvlslcsnik eatvkvaeiw ifslssqpid
      181 hedsamqagp kakstenyse eeyesfsseq easddavqgq dldeddfdvg kpkkqrrsiv
      241 rtpsmtrqqn fkqkvvallr rfkvsdevld seqdpadhvp eveedldlly dtldvenpsd
      301 sgpdmeddds vlstpkpklr pyfeglshss sqteigsihs arsqreppsp advpektrvl
      361 ggkqpsdsvs dsvahstptp geqpappees pevetsaldl fteklppsgr itkteslvip
      421 strsegkqag rrgrstslke rqparpqner ansldnercp dtrsqlqipr ktvydqlnhi
      481 lisddqlpen iilvntsdwq gqflsdvlqr htlpvvctcs aadvqaafst ivsriqrycn
      541 cnsqppppvk iavagaqhyl savlrlfveq lshktpdwlg ymrflviplg shpvarylgs
      601 vdyrynnffq dlawrdlfnk leaqsavqdt pdivsritqy isgancahql piaeamltyk
      661 qkspdeessq kfipfvgvvk vgivepssat sgdsddaaps gssvlsstpp stspaakeas
      721 ptppsspsvs gglssprsag cpaaarprpr ppcp
//
LOCUS       XP_061015549             158 aa            linear   MAM 02-DEC-2023
DEFINITION  testis-expressed protein 22 [Dama dama].
ACCESSION   XP_061015549
VERSION     XP_061015549.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159566.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..158
                     /product="testis-expressed protein 22"
                     /calculated_mol_wt=17628
     CDS             1..158
                     /gene="TEX22"
                     /coded_by="XM_061159566.1:446..922"
                     /db_xref="GeneID:133068302"
ORIGIN      
        1 mdsrecslra flrkkaelqp sqekrqpsgp pspvmawgsp gaqsssqqel qtqdwvcepq
       61 dtwrqshrrw svsiderrrl tmlgrgekpg lagappscrd larivaqlvs edvdkdvlfp
      121 hpprssestn afqaflvrsk pfwhnvtlea pasrspps
//
LOCUS       XP_061015550             158 aa            linear   MAM 02-DEC-2023
DEFINITION  testis-expressed protein 22 [Dama dama].
ACCESSION   XP_061015550
VERSION     XP_061015550.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159567.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..158
                     /product="testis-expressed protein 22"
                     /calculated_mol_wt=17628
     CDS             1..158
                     /gene="TEX22"
                     /coded_by="XM_061159567.1:320..796"
                     /db_xref="GeneID:133068302"
ORIGIN      
        1 mdsrecslra flrkkaelqp sqekrqpsgp pspvmawgsp gaqsssqqel qtqdwvcepq
       61 dtwrqshrrw svsiderrrl tmlgrgekpg lagappscrd larivaqlvs edvdkdvlfp
      121 hpprssestn afqaflvrsk pfwhnvtlea pasrspps
//
LOCUS       XP_061015551             158 aa            linear   MAM 02-DEC-2023
DEFINITION  testis-expressed protein 22 [Dama dama].
ACCESSION   XP_061015551
VERSION     XP_061015551.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159568.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..158
                     /product="testis-expressed protein 22"
                     /calculated_mol_wt=17628
     CDS             1..158
                     /gene="TEX22"
                     /coded_by="XM_061159568.1:274..750"
                     /db_xref="GeneID:133068302"
ORIGIN      
        1 mdsrecslra flrkkaelqp sqekrqpsgp pspvmawgsp gaqsssqqel qtqdwvcepq
       61 dtwrqshrrw svsiderrrl tmlgrgekpg lagappscrd larivaqlvs edvdkdvlfp
      121 hpprssestn afqaflvrsk pfwhnvtlea pasrspps
//
LOCUS       XP_061015552             715 aa            linear   MAM 02-DEC-2023
DEFINITION  metastasis-associated protein MTA1 isoform X1 [Dama dama].
ACCESSION   XP_061015552
VERSION     XP_061015552.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159569.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..715
                     /product="metastasis-associated protein MTA1 isoform X1"
                     /calculated_mol_wt=80419
     Region          3..188
                     /region_name="BAH_MTA"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in MTA1 and similar proteins. The Metastasis-associated
                     protein MTA1 is part of the NURD (nucleosome remodeling
                     and deacetylating) complex and plays a role in cellular
                     transformation and metastasis. BAH...; cd04709"
                     /db_xref="CDD:240060"
     Region          167..219
                     /region_name="ELM2"
                     /note="ELM2 domain; pfam01448"
                     /db_xref="CDD:460214"
     Region          287..332
                     /region_name="SANT_MTA3_like"
                     /note="Myb-Like Dna-Binding Domain of MTA3 and related
                     proteins; cd11661"
                     /db_xref="CDD:212559"
     Site            order(288,318..319,321..322,324..326,328..330)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212559"
     Region          388..441
                     /region_name="ZnF_GATA"
                     /note="zinc finger binding to DNA consensus sequence
                     [AT]GATA[AG]; smart00401"
                     /db_xref="CDD:214648"
     Region          464..541
                     /region_name="MTA_R1"
                     /note="MTA R1 domain; pfam17226"
                     /db_xref="CDD:465388"
     CDS             1..715
                     /gene="MTA1"
                     /coded_by="XM_061159569.1:41..2188"
                     /db_xref="GeneID:133068305"
ORIGIN      
        1 maanmyrvgd yvyfensssn pylirrieel nktasgnvea kvvcfyrrrd issslialad
       61 khatlsvcyk tgsgadtgee geieeemenp emvdlpeklk hqlrhrelfl srqleslpat
      121 hirgkcsvtl lneteslksy leredfffys lvydpqqktl ladkgeirvg nryqaditdl
      181 lkegeedgrd qskletkvwe arnplvdkqi dqflvvarsv gtfaraldcs ssvrqpslhm
      241 saaaasrdit lfhamdtlhr svydvakais alvpqggpvl crdemeewsa seaslfeeal
      301 ekygkdftdi qqdflpwksl tsiieyyymw kttdryvqqk rlkaaeaesk lkqvyipnyn
      361 kpnpnqisvn nvkagvvnga gppgqspgag racescyttq syqwyswgpp nmqcrlcasc
      421 wtywkkyggl kmptrldger pgpnrsnmsp hgiparssgs pkfamktrqa fylhttkltr
      481 iarrlcreil rpwhaarhpy mpinsaaika ectarlpeas qsplvlkqat rkpleavlrf
      541 lethprppkp dpvksvsgvl sgltpaksap vinngsptil gkrsyeqhng vdgnvkkrll
      601 mpsrglanhg qtrhmgpsrn lllngkaypt kvrlirggsl ppvkrrrmnw idapddvfym
      661 ateetrkirk llsssetkra arrpykpial rpsqalpprp pppapvndep ivied
//
LOCUS       XP_061015553             703 aa            linear   MAM 02-DEC-2023
DEFINITION  metastasis-associated protein MTA1 isoform X2 [Dama dama].
ACCESSION   XP_061015553
VERSION     XP_061015553.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159570.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..703
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..703
                     /product="metastasis-associated protein MTA1 isoform X2"
                     /calculated_mol_wt=79038
     Region          3..188
                     /region_name="BAH_MTA"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in MTA1 and similar proteins. The Metastasis-associated
                     protein MTA1 is part of the NURD (nucleosome remodeling
                     and deacetylating) complex and plays a role in cellular
                     transformation and metastasis. BAH...; cd04709"
                     /db_xref="CDD:240060"
     Region          167..219
                     /region_name="ELM2"
                     /note="ELM2 domain; pfam01448"
                     /db_xref="CDD:460214"
     Region          287..332
                     /region_name="SANT_MTA3_like"
                     /note="Myb-Like Dna-Binding Domain of MTA3 and related
                     proteins; cd11661"
                     /db_xref="CDD:212559"
     Site            order(288,318..319,321..322,324..326,328..330)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212559"
     Region          388..441
                     /region_name="ZnF_GATA"
                     /note="zinc finger binding to DNA consensus sequence
                     [AT]GATA[AG]; smart00401"
                     /db_xref="CDD:214648"
     Region          464..541
                     /region_name="MTA_R1"
                     /note="MTA R1 domain; pfam17226"
                     /db_xref="CDD:465388"
     CDS             1..703
                     /gene="MTA1"
                     /coded_by="XM_061159570.1:41..2152"
                     /db_xref="GeneID:133068305"
ORIGIN      
        1 maanmyrvgd yvyfensssn pylirrieel nktasgnvea kvvcfyrrrd issslialad
       61 khatlsvcyk tgsgadtgee geieeemenp emvdlpeklk hqlrhrelfl srqleslpat
      121 hirgkcsvtl lneteslksy leredfffys lvydpqqktl ladkgeirvg nryqaditdl
      181 lkegeedgrd qskletkvwe arnplvdkqi dqflvvarsv gtfaraldcs ssvrqpslhm
      241 saaaasrdit lfhamdtlhr svydvakais alvpqggpvl crdemeewsa seaslfeeal
      301 ekygkdftdi qqdflpwksl tsiieyyymw kttdryvqqk rlkaaeaesk lkqvyipnyn
      361 kpnpnqisvn nvkagvvnga gppgqspgag racescyttq syqwyswgpp nmqcrlcasc
      421 wtywkkyggl kmptrldger pgpnrsnmsp hgiparssgs pkfamktrqa fylhttkltr
      481 iarrlcreil rpwhaarhpy mpinsaaika ectarlpeas qsplvlkqat rkpleavlrf
      541 lethprppkp dpvksvsgvl sgltpaksap vinngsptil gkrsyeqhng vdglanhgqt
      601 rhmgpsrnll lngkayptkv rlirggslpp vkrrrmnwid apddvfymat eetrkirkll
      661 sssetkraar rpykpialrp sqalpprppp papvndepiv ied
//
LOCUS       XP_061015554             430 aa            linear   MAM 02-DEC-2023
DEFINITION  metastasis-associated protein MTA1 isoform X3 [Dama dama].
ACCESSION   XP_061015554
VERSION     XP_061015554.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159571.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..430
                     /product="metastasis-associated protein MTA1 isoform X3"
                     /calculated_mol_wt=48664
     Region          3..188
                     /region_name="BAH_MTA"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in MTA1 and similar proteins. The Metastasis-associated
                     protein MTA1 is part of the NURD (nucleosome remodeling
                     and deacetylating) complex and plays a role in cellular
                     transformation and metastasis. BAH...; cd04709"
                     /db_xref="CDD:240060"
     Region          167..219
                     /region_name="ELM2"
                     /note="ELM2 domain; pfam01448"
                     /db_xref="CDD:460214"
     Region          287..332
                     /region_name="SANT_MTA3_like"
                     /note="Myb-Like Dna-Binding Domain of MTA3 and related
                     proteins; cd11661"
                     /db_xref="CDD:212559"
     Site            order(288,318..319,321..322,324..326,328..330)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212559"
     CDS             1..430
                     /gene="MTA1"
                     /coded_by="XM_061159571.1:41..1333"
                     /db_xref="GeneID:133068305"
ORIGIN      
        1 maanmyrvgd yvyfensssn pylirrieel nktasgnvea kvvcfyrrrd issslialad
       61 khatlsvcyk tgsgadtgee geieeemenp emvdlpeklk hqlrhrelfl srqleslpat
      121 hirgkcsvtl lneteslksy leredfffys lvydpqqktl ladkgeirvg nryqaditdl
      181 lkegeedgrd qskletkvwe arnplvdkqi dqflvvarsv gtfaraldcs ssvrqpslhm
      241 saaaasrdit lfhamdtlhr svydvakais alvpqggpvl crdemeewsa seaslfeeal
      301 ekygkdftdi qqdflpwksl tsiieyyymw kttdryvqqk rlkaaeaesk lkqvyipnyn
      361 kpnpnqisvn nvkagvvnga gppgqspgag racescymsp lrvlldilee iwwlenanpv
      421 rwreagtqpq
//
LOCUS       XP_061015556             208 aa            linear   MAM 02-DEC-2023
DEFINITION  cysteine-rich protein 2 [Dama dama].
ACCESSION   XP_061015556
VERSION     XP_061015556.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159573.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..208
                     /product="cysteine-rich protein 2"
                     /calculated_mol_wt=22503
     Region          5..58
                     /region_name="LIM1_TLP"
                     /note="The first LIM domain of thymus LIM protein (TLP);
                     cd09476"
                     /db_xref="CDD:188860"
     Site            order(5,8,26,29,32,35,53,57)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188860"
     Region          126..179
                     /region_name="LIM_CRIP"
                     /note="The LIM domain of Cysteine-Rich Intestinal Protein
                     (CRIP); cd09478"
                     /db_xref="CDD:188862"
     Site            order(126,129,147,150,153,156,174,178)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188862"
     CDS             1..208
                     /gene="CRIP2"
                     /coded_by="XM_061159573.1:68..694"
                     /db_xref="GeneID:133068306"
ORIGIN      
        1 maskcpkcdk tvyfaekvss lgkdwhrfcl rcehcsktlt pgghaehdgk pfchkpcyat
       61 lfgpkgvnig gagsyiyekp saekpqvtgp ievpvartee rkasgppkgp skassvttft
      121 gepnmcprcn krvyfaekvt slgkdwhrpc lrcercgktl tpgghaehdg qpychkpcyg
      181 ilfgpkgvnt gavgsyiydk dpegkaqp
//
LOCUS       XP_061015557              77 aa            linear   MAM 02-DEC-2023
DEFINITION  cysteine-rich protein 1 [Dama dama].
ACCESSION   XP_061015557
VERSION     XP_061015557.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159574.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..77
                     /product="cysteine-rich protein 1"
                     /calculated_mol_wt=8375
     Region          4..57
                     /region_name="LIM_CRIP"
                     /note="The LIM domain of Cysteine-Rich Intestinal Protein
                     (CRIP); cd09478"
                     /db_xref="CDD:188862"
     Site            order(4,7,25,28,31,34,52,56)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188862"
     CDS             1..77
                     /gene="CRIP1"
                     /coded_by="XM_061159574.1:121..354"
                     /db_xref="GeneID:133068307"
ORIGIN      
        1 mpkcpkcske vyfaervtsl gkdwhrpclk cekcgktlts gghaehegkp ycnhpcyaam
       61 fgpkgfgrgg aeshtfk
//
LOCUS       XP_061015558             426 aa            linear   MAM 02-DEC-2023
DEFINITION  tubulin epsilon and delta complex protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061015558
VERSION     XP_061015558.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159575.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..426
                     /product="tubulin epsilon and delta complex protein 1
                     isoform X1"
                     /calculated_mol_wt=47232
     Region          89..261
                     /region_name="TEDC1"
                     /note="Tubulin epsilon and delta complex protein 1;
                     pfam14970"
                     /db_xref="CDD:464414"
     CDS             1..426
                     /gene="TEDC1"
                     /coded_by="XM_061159575.1:1..1281"
                     /db_xref="GeneID:133068308"
ORIGIN      
        1 mgrrrrrrpd padaaralpe aiaalsrtlp aapspeifrr akfdrpeaap alwrllfrvl
       61 splsadsasv slaleaqvrw vksvlhsqgy prralvqlqd dgsqggrell lalawllarg
      121 plperlltqs hvrlgdempv cecealaspg ppaprveaeg svdirhlqwm mgklwlrwrn
      181 lmagqqeqca llgkihshtr gchsdrslgh lsvteaellr dpeggrqllq rletenarle
      241 aalewrhrel vfwrwmdtvl dtcpleaspp tllpripepg agtaglpvre lqalqeelqa
      301 lqeelreave arraawqaav gghgpewraa rralqaavaq dlaalqrawe qgkdqarphg
      361 prrlvrtear vpggpglwat eatealrare acleamlrql qgqcqqelar lagarpgliw
      421 vppptr
//
LOCUS       XP_061015559             372 aa            linear   MAM 02-DEC-2023
DEFINITION  tubulin epsilon and delta complex protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061015559
VERSION     XP_061015559.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159576.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..372
                     /product="tubulin epsilon and delta complex protein 1
                     isoform X2"
                     /calculated_mol_wt=41310
     Region          89..261
                     /region_name="TEDC1"
                     /note="Tubulin epsilon and delta complex protein 1;
                     pfam14970"
                     /db_xref="CDD:464414"
     CDS             1..372
                     /gene="TEDC1"
                     /coded_by="XM_061159576.1:1..1119"
                     /db_xref="GeneID:133068308"
ORIGIN      
        1 mgrrrrrrpd padaaralpe aiaalsrtlp aapspeifrr akfdrpeaap alwrllfrvl
       61 splsadsasv slaleaqvrw vksvlhsqgy prralvqlqd dgsqggrell lalawllarg
      121 plperlltqs hvrlgdempv cecealaspg ppaprveaeg svdirhlqwm mgklwlrwrn
      181 lmagqqeqca llgkihshtr gchsdrslgh lsvteaellr dpeggrqllq rletenarle
      241 aalewrhrel vfwrwmdtvl dtcpleaspp tllpripepg agtaglpvre lqalqeelqa
      301 lqeelreave arraawqaav gghgpewraa rralqaavaq dlaalqrawe qgkdqarphg
      361 prrlaarerg pa
//
LOCUS       XP_061015560             423 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133068311 [Dama dama].
ACCESSION   XP_061015560
VERSION     XP_061015560.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159577.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..423
                     /product="uncharacterized protein LOC133068311"
                     /calculated_mol_wt=44756
     CDS             1..423
                     /gene="LOC133068311"
                     /coded_by="XM_061159577.1:2839..4110"
                     /db_xref="GeneID:133068311"
ORIGIN      
        1 mattataqia tgptgghpht lgaphsdpri gslflesgal kavdlwhsgl mrralaswen
       61 prtevtqvvr tcrdhcglga elgpsprkpg gsawhpqalv ggqrlsphra rvqrprvlvs
      121 rrpphpqdpe rgalgralgm gcpglgsrdv hkeaphtrir ppqgssigti hgghqklgpg
      181 lpsqrvrrpg trqaggplca slqgralaps pppslpphpq pvlraplgrg ghrefgrggl
      241 tlrlqwrspp wlrapprdsr aqscpvqlpc ctwtdgvags agldrgvwqw ipsshpppap
      301 rgagwretep gvshggdnhs varpqpethm splhpcpqdp lagrvtlags gplcqdraql
      361 qgglepeglg vqpkghqtwa eraprsgmpt alhraralhg hsvhsgmgpq tlpnmglvqi
      421 wts
//
LOCUS       XP_061015561             423 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133068311 [Dama dama].
ACCESSION   XP_061015561
VERSION     XP_061015561.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159578.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..423
                     /product="uncharacterized protein LOC133068311"
                     /calculated_mol_wt=44756
     CDS             1..423
                     /gene="LOC133068311"
                     /coded_by="XM_061159578.1:2867..4138"
                     /db_xref="GeneID:133068311"
ORIGIN      
        1 mattataqia tgptgghpht lgaphsdpri gslflesgal kavdlwhsgl mrralaswen
       61 prtevtqvvr tcrdhcglga elgpsprkpg gsawhpqalv ggqrlsphra rvqrprvlvs
      121 rrpphpqdpe rgalgralgm gcpglgsrdv hkeaphtrir ppqgssigti hgghqklgpg
      181 lpsqrvrrpg trqaggplca slqgralaps pppslpphpq pvlraplgrg ghrefgrggl
      241 tlrlqwrspp wlrapprdsr aqscpvqlpc ctwtdgvags agldrgvwqw ipsshpppap
      301 rgagwretep gvshggdnhs varpqpethm splhpcpqdp lagrvtlags gplcqdraql
      361 qgglepeglg vqpkghqtwa eraprsgmpt alhraralhg hsvhsgmgpq tlpnmglvqi
      421 wts
//
LOCUS       XP_061015562             515 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase makorin-3
            [Dama dama].
ACCESSION   XP_061015562
VERSION     XP_061015562.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159579.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..515
                     /product="LOW QUALITY PROTEIN: probable E3
                     ubiquitin-protein ligase makorin-3"
                     /calculated_mol_wt=56096
     Region          <22..231
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          119..140
                     /region_name="zf-CCCH_4"
                     /note="CCCH-type zinc finger; pfam18044"
                     /db_xref="CDD:465626"
     Region          <272..420
                     /region_name="PHA03096"
                     /note="p28-like protein; Provisional"
                     /db_xref="CDD:222981"
     Region          328..388
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(331,334,355,357,360,363,381,384)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:319644"
     Region          418..439
                     /region_name="zf-CCCH_4"
                     /note="CCCH-type zinc finger; pfam18044"
                     /db_xref="CDD:465626"
     Region          441..>497
                     /region_name="MKRN1_C"
                     /note="E3 ubiquitin-protein ligase makorin, C-terminal;
                     pfam15815"
                     /db_xref="CDD:464890"
     CDS             1..515
                     /gene="MKRN3"
                     /coded_by="XM_061159579.1:1..1548"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /db_xref="GeneID:133068325"
ORIGIN      
        1 mhsskgrvpe larglrassl kgrhtgevpv pfwgvkaame epaapkephe aagasrgtea
       61 agegtprptl pvrpvsrwss apgptpfrps rlrpaqaswg gagpswlqsr stgswtkqvv
      121 cryylhglck egencryshd lsgrqvageg pgsqpqasad sgpstaahme plpqqvaeap
      181 paassrslpv igsaaerglf eaetdnagle aargagvegw enavefvpgq pyrgrmvpsv
      241 seaplqssvt esgqivlgmg rqlcrdaiag qcfrgqdcvy lhgdicdmcg lpvlhpldga
      301 qradhvkaci eaheknmels favqrsadkv cgicmevvye kanrndcrfg ilsscnhtyc
      361 lkcirrwrsa rqfgsrviks cpqcrvmstf vipseywvee eeekqkliqq ylealshktc
      421 ryfargrvcp fgencfykhv ypegqgeepq rqgaeasgtc hwepleplqv gegnmpfkss
      481 rkelvmlwla nllckcfhqe lcaplhrglv glasl
//
LOCUS       XP_061015563            1183 aa            linear   MAM 02-DEC-2023
DEFINITION  MAGE-like protein 2 [Dama dama].
ACCESSION   XP_061015563
VERSION     XP_061015563.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159580.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1183
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1183
                     /product="MAGE-like protein 2"
                     /calculated_mol_wt=126528
     Region          <11..483
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <424..551
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          963..1129
                     /region_name="MAGE"
                     /note="MAGE homology domain; pfam01454"
                     /db_xref="CDD:426270"
     CDS             1..1183
                     /gene="MAGEL2"
                     /coded_by="XM_061159580.1:98..3649"
                     /db_xref="GeneID:133068326"
ORIGIN      
        1 msqlsknlgd psppeeapkp avysrptvlm rappassrap pvpwdpppid lqaslaawqa
       61 pqpaweapqg qppapvapms qppslggpmv qapplggpmg kpptpgvlmi hppppgapla
      121 qpptpgvlmm hpsapgapma hppppgtpma hppppgtpma hppppgtpmv hppppgtpma
      181 hppppgtpma hpppppatpm ahppppgtpm aqppapgvli pqpltpgvlm vqppapgapi
      241 aqpppppplm aqppplgapm akppgpgvlm ihpagsrppi tqppataapi vqppapappa
      301 qpmaswapqa qplilqiqsq virapppvpq gpqappvqla tppgwqatsp gwqaptqgws
      361 atplgwsttq vtwpgptiaw qaplpvrpgp ppirpgpppi rpgpppirqa pppirqappl
      421 irqapppirp apqvlatppp lwqalppppp lrqapqtrlp tpqlraappi raapqvptap
      481 papqmptapp avpqapptvm paplpaplsa pqavhcppii wqapkgqapv pqemptsmef
      541 qevqqaqasl awqapkaqgq fwqslptqea qrqgpplvql eqpfqgapas qkalqiqlst
      601 qqaqlsssqg elpsmqlqps wqgppaalqg qpgaplagan fpmgsakslm tpsgesrass
      661 idrrtsskdr rtsskerkap lkdrmifggt fyaprampta gahlptpwkn fpatsetfna
      721 tprvfpstsq fqpassnafk gpsaiseapk slpftlqdpf aciealpaip wvpqpnvnss
      781 kaskagpsil mttaatpqvm aitqeaskts tepprrsgka trkkkhlnte egdssgkmln
      841 mchwqaprrw esldlndwel qapiqflcdw egpstsrils gweglstsqi lsgwegpsts
      901 walsawegps tsralglwes pvsppsliip elptlaqgfg atqydpklet qplspldera
      961 nalvqfllvk dqakvpikrs emvkfiirey kdecleiisr ashklecvfg yqlkeidprn
     1021 hsyilinkgr kgdtgasyld rpklgllmvv lslifmkgnc vredliftfl cklglniqet
     1081 hglfgntkkl itevfvreky leyrripfte peeheflwgp rafletskmi vlkflarlyk
     1141 kdprcwpyqy yealaecese dldedesdpd dktddptsnp pph
//
LOCUS       XP_061015565             325 aa            linear   MAM 02-DEC-2023
DEFINITION  necdin [Dama dama].
ACCESSION   XP_061015565
VERSION     XP_061015565.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159582.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..325
                     /product="necdin"
                     /calculated_mol_wt=36437
     Region          <14..>101
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          109..277
                     /region_name="MAGE"
                     /note="MAGE homology domain; pfam01454"
                     /db_xref="CDD:426270"
     CDS             1..325
                     /gene="NDN"
                     /coded_by="XM_061159582.1:110..1087"
                     /db_xref="GeneID:133068327"
ORIGIN      
        1 mseqskdvcd pnfeaeasns eghsspgipg gpsapgsqaa tlaepesppl sppdaplasl
       61 ppqapgeegd pkalqqaaee grphqapstt qlspappapa qlvqkahelm wyvlvkdqkr
      121 miiwfpdmvk dvigsykkwc rsilrrtsli larvfglhlr ltslhtmefs lvkalepeel
      181 drvalsnrmp mtglllmils liyvkgrgar esavwnvlri lglrpwkkhs tfgdvrklit
      241 eefvqqnylk yqrvphvepp eyeffwgsra sreitkmqim eflarvfkkn pqawpsryre
      301 aleearalre ahptaycprn svsed
//
LOCUS       XP_061015566              90 aa            linear   MAM 02-DEC-2023
DEFINITION  high mobility group nucleosome-binding domain-containing protein
            4-like [Dama dama].
ACCESSION   XP_061015566
VERSION     XP_061015566.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159583.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..90
                     /product="high mobility group nucleosome-binding
                     domain-containing protein 4-like"
                     /calculated_mol_wt=9438
     Region          7..89
                     /region_name="HMG14_17"
                     /note="HMG14 and HMG17; pfam01101"
                     /db_xref="CDD:460064"
     CDS             1..90
                     /gene="LOC133068328"
                     /coded_by="XM_061159583.1:73..345"
                     /db_xref="GeneID:133068328"
ORIGIN      
        1 mpkrkakgda kgdkgkvkde pqkrsarlsa kpalpkpepr pkkdpakkge klakgrkgka
       61 evgkdgnnpa knrdastvqs qkaegtgdak
//
LOCUS       XP_061015567             414 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein kinase 17A-like [Dama dama].
ACCESSION   XP_061015567
VERSION     XP_061015567.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159584.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..414
                     /product="serine/threonine-protein kinase 17A-like"
                     /calculated_mol_wt=46122
     Region          51..321
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(67..70,73,75,88,90,122,138..141,186,190..191,193,
                     206..207)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..414
                     /gene="LOC133068329"
                     /coded_by="XM_061159584.1:1..1245"
                     /db_xref="GeneID:133068329"
ORIGIN      
        1 mipleklgsg gsspaaasgs gragrglstp rrpppptqar gllteirtav rtepfqdayt
       61 ltpgrelgrg kfavvrkcik kdsgkkiaak fmrkrrkgqd crmeivheia vlklaqdnpw
      121 vinlhevyet psemilvley aaggeifdqc vadrdeafre kdvqrlmrqi legvcflhah
      181 dvvhldlkpq nilltsespl gdikivdfgl srimkkseel reimgtpeyv apevlsydpi
      241 smatdmwsig vlayvmltgi spflgddkqe tflnisqmnl syseeefdvv sesavdfikt
      301 llvkkpedra taeeclkhpw ltesgvqepa fkvkgaleaa halqeadsvs esnsdtqkpe
      361 teesivteel ivvtsytlgq crqsekekme qkavskrfkf eepllqdipg dfiy
//
LOCUS       XP_061015568             472 aa            linear   MAM 02-DEC-2023
DEFINITION  gamma-aminobutyric acid receptor subunit beta-3 [Dama dama].
ACCESSION   XP_061015568
VERSION     XP_061015568.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159585.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..472
                     /product="gamma-aminobutyric acid receptor subunit beta-3"
                     /calculated_mol_wt=53956
     Region          8..470
                     /region_name="LIC"
                     /note="Cation transporter family protein; TIGR00860"
                     /db_xref="CDD:273305"
     CDS             1..472
                     /gene="GABRB3"
                     /coded_by="XM_061159585.1:30..1448"
                     /db_xref="GeneID:133068331"
ORIGIN      
        1 mwgfaggrff gifsapvlva vvccaqsvnd pgnmsfvket vdkllkgydi rlrpdfggpp
       61 vcvgmnidia sidmvsevnm dytltmyfqq ywrdkrlays giplnltldn rvadqlwvpd
      121 tyflndkksf vhgvtvknrm irlhpdgtvl yglritttaa cmmdlrrypl deqnctleie
      181 sygyttddie fywrggdkav tgverielpq fsivehrlvs rnvvfatgay prlslsfrlk
      241 rnigyfilqt ympsilitil swvsfwinyd asaarvalgi ttvltmttin thlretlpki
      301 pyvkaidmyl mgcfvfvfla lleyafvnyi ffgrgpqrqk klaeknakak ndrskgdsnr
      361 vdahgnillt slevhnemne vaggvgdarn sarsfdnsgi qyrkqsmpre ghgrhmdrsi
      421 phkkthlrrr ssqlkikipd ltdvnaidrw srivfpftfs lfnlvywlyy vn
//
LOCUS       XP_061015569             462 aa            linear   MAM 02-DEC-2023
DEFINITION  gamma-aminobutyric acid receptor subunit alpha-5 [Dama dama].
ACCESSION   XP_061015569
VERSION     XP_061015569.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159586.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..462
                     /product="gamma-aminobutyric acid receptor subunit
                     alpha-5"
                     /calculated_mol_wt=52043
     Region          58..256
                     /region_name="LGIC_ECD_GABAAR_A5"
                     /note="extracellular domain of gamma-aminobutyric acid
                     receptor subunit alpha-5 (GABAAR-A5 or GABRA5); cd19038"
                     /db_xref="CDD:349839"
     Site            order(71,99)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:349839"
     Site            order(83,85..86,91..92,99,101..102,119,121..122,131..136,
                     139,141,143..144,150..152,154,164..166,194,256)
                     /site_type="other"
                     /note="pentamer interface [polypeptide binding]"
                     /db_xref="CDD:349839"
     Region          173..187
                     /region_name="Cys-loop"
                     /note="Cys-loop [structural motif]"
                     /db_xref="CDD:349839"
     Region          259..445
                     /region_name="LGIC_TM_GABAAR_alpha"
                     /note="transmembrane domain of alpha subunits of type-A
                     gamma-aminobutyric acid receptor (GABAAR); cd19052"
                     /db_xref="CDD:349854"
     Site            order(259,262..263,270..271,273..274,277,280..282,
                     285..288,290..292,294..295,298..299,305..306,308..309,
                     316..317,328,332,335,339,342..343,430)
                     /site_type="other"
                     /note="pentamer interface [polypeptide binding]"
                     /db_xref="CDD:349854"
     Region          259..282
                     /region_name="TM1 helix"
                     /note="TM1 helix [structural motif]"
                     /db_xref="CDD:349854"
     Site            order(273,276..277,280,336,339..340,434)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:349854"
     Region          286..310
                     /region_name="TM2 helix"
                     /note="TM2 helix [structural motif]"
                     /db_xref="CDD:349854"
     Region          318..344
                     /region_name="TM3 helix"
                     /note="TM3 helix [structural motif]"
                     /db_xref="CDD:349854"
     Region          421..445
                     /region_name="TM4 helix"
                     /note="TM4 helix [structural motif]"
                     /db_xref="CDD:349854"
     CDS             1..462
                     /gene="GABRA5"
                     /coded_by="XM_061159586.1:1..1389"
                     /db_xref="GeneID:133068333"
ORIGIN      
        1 mdngmfssfi miknlllfci smnlashfgf sqmptssvka etddnitift rildglldgy
       61 dnrlrpglge ritqvrtdiy vtsfgpvsdt emeytidvff rqswkderlr fkgpmqrlpl
      121 nnllaskiwt pdtffhngkk siahnmttpn kllrleddgt llytmrltis aecpmqledf
      181 pmdahacplk fgsyaypnse vvyvwtngta ksvvvaedgs rlnqyhlmgq tvgtenists
      241 tgeytimtah fhlkrkigyf viqtylpcim tvilsqvsfw lnresvpart vfgvttvltm
      301 ttlsisarns lpkvayatam dwfiavcyaf vfsaliefat vnyftkrgwa wdgkkaleaa
      361 kikkkerelt inkstnaytt gkmthppnip keqtpagttn assasvkped ktsenkktyn
      421 siskidkmsr iifpvlfgtf nlvywatyln repvikgats pk
//
LOCUS       XP_061015570             467 aa            linear   MAM 02-DEC-2023
DEFINITION  gamma-aminobutyric acid receptor subunit gamma-3 [Dama dama].
ACCESSION   XP_061015570
VERSION     XP_061015570.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159587.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..467
                     /product="gamma-aminobutyric acid receptor subunit
                     gamma-3"
                     /calculated_mol_wt=54063
     Region          50..464
                     /region_name="LIC"
                     /note="Cation transporter family protein; cl42365"
                     /db_xref="CDD:455710"
     Region          71..252
                     /region_name="LGIC_ECD_GABAAR_G"
                     /note="extracellular domain of gamma-aminobutyric acid
                     receptor subunit gamma; cd19000"
                     /db_xref="CDD:349801"
     Site            order(78,97)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:349801"
     Site            order(81,83..84,89..90,97,99..100,117,119..120,129..134,
                     137,139,141..142,148..150,152,162..164,192,252)
                     /site_type="other"
                     /note="pentamer interface [polypeptide binding]"
                     /db_xref="CDD:349801"
     Region          171..185
                     /region_name="Cys-loop"
                     /note="Cys-loop [structural motif]"
                     /db_xref="CDD:349801"
     CDS             1..467
                     /gene="GABRG3"
                     /coded_by="XM_061159587.1:1..1404"
                     /db_xref="GeneID:133068334"
ORIGIN      
        1 mapklllllc llsglhartr kveedeyeds ssnqkwvlap ksqdtdvtli lnkllreydk
       61 klrpdigikp tvidvdiyvn sigpvssinm eyqidiffaq twtdsrlrfn stmkiltlns
      121 nmvgliwipd tifrnsktae ahwittpnql lriwndgkil ytlrltinae cqlqlhnfpm
      181 dahscpltfs sygypkeemi yrwrknsvea adqkswrlyq fdfmglrntt eivqtsagdy
      241 vvmtiyfels rrmgyftiqt yipciltvvl swvsfwikkd atpartalgi ttvltmttls
      301 tiarkslprv syvtamdlfv tvcflfvfaa lmeyatlnyy sscrkptttk kktsllhads
      361 srwiherisl qapsnyslld mrppppvtvt lnnsvywqel edtcvyecld gkdcqsffcc
      421 yeecksgswr kghihidile ldsysrvffp tsfllfnlvy wvgylyl
//
LOCUS       XP_061015572             265 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquinone biosynthesis protein COQ4 homolog, mitochondrial-like
            [Dama dama].
ACCESSION   XP_061015572
VERSION     XP_061015572.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159589.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..265
                     /product="ubiquinone biosynthesis protein COQ4 homolog,
                     mitochondrial-like"
                     /calculated_mol_wt=29425
     Region          46..258
                     /region_name="Coq4"
                     /note="Coenzyme Q (ubiquinone) biosynthesis protein Coq4;
                     pfam05019"
                     /db_xref="CDD:461522"
     CDS             1..265
                     /gene="LOC133068336"
                     /coded_by="XM_061159589.1:331..1128"
                     /db_xref="GeneID:133068336"
ORIGIN      
        1 matllrgllr plcafrgspg sstgvplrav shgagllype hiptsplqkv llaagsagma
       61 lydpyrhdmv avlgettgyr tlkvlrdqmk rdpegaqilq erprislstl dmgklrglpe
      121 gsfgcaylrf ldvnrvspdt raptrfvdde elayviqryr eihdmlhtll gmptnilgei
      181 vvkwfeavqt glpmcvlsal fgpiqlsaqs lrlliselip wavengrrap cvlnvyyerr
      241 weqplqtlrq elgitepplr veglv
//
LOCUS       XP_061015573              76 aa            linear   MAM 02-DEC-2023
DEFINITION  small nuclear ribonucleoprotein G-like [Dama dama].
ACCESSION   XP_061015573
VERSION     XP_061015573.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159590.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..76
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..76
                     /product="small nuclear ribonucleoprotein G-like"
                     /calculated_mol_wt=8424
     Region          5..74
                     /region_name="Sm_G"
                     /note="Sm protein G; cd01719"
                     /db_xref="CDD:212466"
     Site            order(8,12,20,25,38,59,61..62,64,67..71,73)
                     /site_type="other"
                     /note="heptamer interface [polypeptide binding]"
                     /db_xref="CDD:212466"
     Site            order(17..23,25..37,39..43)
                     /site_type="other"
                     /note="Sm1 motif"
                     /db_xref="CDD:212466"
     Site            order(37,39,63,65)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:212466"
     Site            59..70
                     /site_type="other"
                     /note="Sm2 motif"
                     /db_xref="CDD:212466"
     CDS             1..76
                     /gene="LOC133068337"
                     /coded_by="XM_061159590.1:40..270"
                     /db_xref="GeneID:133068337"
ORIGIN      
        1 mskahppelk kfmdkklslk lnggrhvqgi lrgfdpfmnl videcvemat sgqqnnigmv
       61 virrnsivms ealerv
//
LOCUS       XP_061015574             159 aa            linear   MAM 02-DEC-2023
DEFINITION  membrane protein FAM174B [Dama dama].
ACCESSION   XP_061015574
VERSION     XP_061015574.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159591.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..159
                     /product="membrane protein FAM174B"
                     /calculated_mol_wt=16449
     Region          <75..158
                     /region_name="DUF1180"
                     /note="Protein of unknown function (DUF1180); pfam06679"
                     /db_xref="CDD:429067"
     CDS             1..159
                     /gene="FAM174B"
                     /coded_by="XM_061159591.1:1..480"
                     /db_xref="GeneID:133068343"
ORIGIN      
        1 mrapppparl lplllllall gapaarasra qsagppqpga erqprpppgp gpgnatgtgs
       61 geaagggggs nssgdalvtr issllrdlpt lkaavivaca ftafliacll lrvfrsgkrl
      121 kktrkydiit tpaervemap lneeddeded stvfdikyr
//
LOCUS       XP_061015576             375 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-2,8-sialyltransferase 8B [Dama dama].
ACCESSION   XP_061015576
VERSION     XP_061015576.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159593.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..375
                     /product="alpha-2,8-sialyltransferase 8B"
                     /calculated_mol_wt=42329
     Region          91..368
                     /region_name="GT29_ST8SIA2"
                     /note="alpha-N-acetylneuraminide
                     alpha-2,8-sialyltransferase 2; cd23987"
                     /db_xref="CDD:467715"
     Site            order(161..163,184..185,206,294..296,314..315,328..330,
                     346)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:467715"
     CDS             1..375
                     /gene="ST8SIA2"
                     /coded_by="XM_061159593.1:1..1128"
                     /db_xref="GeneID:133068345"
ORIGIN      
        1 mqlqfrswml aaltllvvfl ifadiseiee eignsggrgt irsavnslhs ksnraevvin
       61 gsslpavvdr snesikhniq pasakwrhnq tlslrirkqi lkfldaekdi svlkgtlkpg
      121 diihyifdrd stmnvsqnly ellprtsplk nkhfgtcaiv gnsgvllnsg cgqeidthsf
      181 vircnlapvq eyardvglkt dlvtmnpsvv qrafedlvna twrekllqrl hslngsilwi
      241 pafmarggkq rvewvnelil khrvnvrtay pslrllhavr gywltnkvhi krpttgllmy
      301 tlatrfcnqi ylygfwpfpl dqnqnpvkyh yydslkygyt sqasphtmpl efkalkslhe
      361 qgalkltvgq cdgat
//
LOCUS       XP_061015577             330 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 39-like
            [Dama dama].
ACCESSION   XP_061015577
VERSION     XP_061015577.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159594.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..330
                     /product="LOW QUALITY PROTEIN: rho guanine nucleotide
                     exchange factor 39-like"
                     /calculated_mol_wt=37372
     Region          27..194
                     /region_name="RhoGEF"
                     /note="RhoGEF domain; pfam00621"
                     /db_xref="CDD:459876"
     CDS             1..330
                     /gene="LOC133068347"
                     /coded_by="XM_061159594.1:8..1000"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:133068347"
ORIGIN      
        1 mespapgarc pvqeqrarwe rkrsctarel leterryqeq lglvatyfva ilrakgtlrp
       61 perqalfgpw eliygasqel lpyleggrwg qglegfcnhl elytqfaanv ersrtilqeq
      121 lknkhfrrfv rlqegrpefg glqlqdllpl plqrlhqyen lavalaents pnspehkqlt
      181 raaqliseta qkvhtiaqkq kneqhlqrvq allsgrqakg lisgrwflrq gwllvvppqg
      241 exfflfsdal lmakprpplh llqsgtfacr alypmaecql hrvfghsggp cggllslsfp
      301 heklllmstd qeelshwhhs ltlaissqkn
//
LOCUS       XP_061015578             312 aa            linear   MAM 02-DEC-2023
DEFINITION  myeloid-associated differentiation marker-like [Dama dama].
ACCESSION   XP_061015578
VERSION     XP_061015578.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159595.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..312
                     /product="myeloid-associated differentiation marker-like"
                     /calculated_mol_wt=35323
     Region          18..137
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     Region          154..296
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     CDS             1..312
                     /gene="LOC133068350"
                     /coded_by="XM_061159595.1:1..939"
                     /db_xref="GeneID:133068350"
ORIGIN      
        1 mstrwtspdp dvtaimclcl rlpqlfsmcv aislvagrat ergavgnwsm siwcfcfamt
       61 lmvfivefyg fhshfpffwf nfpvtyacya tllclsasii ysityvqflp dgpyrdrvia
      121 asafscvasv lyaidvactw vaygfkeipc yvhtlpgllk vletfvayvi fafiintsly
      181 lhqpalewcv amysicfipa alaillnlge weyrlprpyp ifqllltlls vllyisalvl
      241 wllyqfyeel ggqpqrssdg dcrdeltydm ctwdqrlava vltainllvy vtdlvywahq
      301 vsvgtedqpt ds
//
LOCUS       XP_061015579             312 aa            linear   MAM 02-DEC-2023
DEFINITION  myeloid-associated differentiation marker-like [Dama dama].
ACCESSION   XP_061015579
VERSION     XP_061015579.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159596.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..312
                     /product="myeloid-associated differentiation marker-like"
                     /calculated_mol_wt=35481
     Region          18..133
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     Region          154..296
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     CDS             1..312
                     /gene="LOC133068353"
                     /coded_by="XM_061159596.1:189..1127"
                     /db_xref="GeneID:133068353"
ORIGIN      
        1 mstgrtspdk cglyivfscl rvpqlaciis afflvldkgi rwwdisnrim fswcfciigt
       61 ltivilelyr fptdfpfcwy nfsityacya altclsaaif ypityikflp ydasrnraia
      121 atvfsciacv vyvmevaciw ecyklkeipc yvhtmpgllk vletfvacvi fvfisntsly
      181 mdqpalewcv avysicfila vvamlmdrde wesrlpvsfp vfhlgltlls illhftalvl
      241 wllyqfdeky ggqpqqssdv ncidrttnsm ctwdqrlavt iltainlliy madlgywahq
      301 vsvgtggqpt df
//
LOCUS       XP_061015580             270 aa            linear   MAM 02-DEC-2023
DEFINITION  myeloid-associated differentiation marker-like [Dama dama].
ACCESSION   XP_061015580
VERSION     XP_061015580.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159597.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..270
                     /product="myeloid-associated differentiation marker-like"
                     /calculated_mol_wt=30744
     Region          117..259
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     CDS             1..270
                     /gene="LOC133068356"
                     /coded_by="XM_061159597.1:58..870"
                     /db_xref="GeneID:133068356"
ORIGIN      
        1 mgfergdigh wsmsiwcfcf amtliivmve lwrlpshfpf ywynfpitya cyaalvclst
       61 siiysiayvq fllygpsrdr aiaatafsci asvvcamdva wvwdwydldd itcyvhtlpg
      121 llkvletfva gvifaflsnt slylhqpale wcvavysicf ilaavvllln lgereyrlpv
      181 pfpvfqlvlt tlsvllyisa lvlwplyqfy eelggqpqrs ndgdcrdelt ydmckwdqrl
      241 availtainl lvyvadlvyw ahqvsvgted
//
LOCUS       XP_061015581             274 aa            linear   MAM 02-DEC-2023
DEFINITION  myeloid-associated differentiation marker-like [Dama dama].
ACCESSION   XP_061015581
VERSION     XP_061015581.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159598.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..274
                     /product="myeloid-associated differentiation marker-like"
                     /calculated_mol_wt=31424
     Region          113..258
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     CDS             1..274
                     /gene="LOC133068357"
                     /coded_by="XM_061159598.1:1..825"
                     /db_xref="GeneID:133068357"
ORIGIN      
        1 mgihrgyign wfmfiwcfcc avtliiltve lrrlpsefpf fwylsntyac ysallclsas
       61 viysityiqf lpygpyrdra iaatafscia svfyamevvk mwerckiykt tcyvltmpgl
      121 lkvletfmag iifsfiints lylhqpalew cvamysicfi paalaillnl geweyrlpgp
      181 lplfqlvltl lsvllyisal vlwllyqfne efgghpqrss dehcrdelty dmctwdqrla
      241 vavltainll aymaelvywa cqvsvetkal prvs
//
LOCUS       XP_061015582             303 aa            linear   MAM 02-DEC-2023
DEFINITION  myeloid-associated differentiation marker-like isoform X1 [Dama
            dama].
ACCESSION   XP_061015582
VERSION     XP_061015582.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159599.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..303
                     /product="myeloid-associated differentiation marker-like
                     isoform X1"
                     /calculated_mol_wt=34146
     Region          19..137
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     Region          154..296
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     CDS             1..303
                     /gene="LOC133068359"
                     /coded_by="XM_061159599.1:1..912"
                     /db_xref="GeneID:133068359"
ORIGIN      
        1 mttrstspsg dakfnvcrfl rlpqlcstcv afslvadmgn prgaignwsm sfwcvcfamt
       61 fiiaiveccr hpshflffwy nisvtyacya aliclsasii ysityvqfvp ygpnrdraia
      121 atafsciasv lyvievagmw awyelkeiff ykhtlrallk vletfvagvi faflsntsly
      181 lhqpalewcv avysicfila avvllldlae weymlsgpfs ifqlvitlls illyvsalvl
      241 wplyqfyeel ggqpqrssdg dcrdeltydm ctwdqrlava vltainllvy vadlvylacq
      301 vfl
//
LOCUS       XP_061015583             287 aa            linear   MAM 02-DEC-2023
DEFINITION  myeloid-associated differentiation marker-like isoform X2 [Dama
            dama].
ACCESSION   XP_061015583
VERSION     XP_061015583.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159600.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..287
                     /product="myeloid-associated differentiation marker-like
                     isoform X2"
                     /calculated_mol_wt=32394
     Region          1..121
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     Region          138..280
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     CDS             1..287
                     /gene="LOC133068359"
                     /coded_by="XM_061159600.1:37..900"
                     /db_xref="GeneID:133068359"
ORIGIN      
        1 mgflrlpqlc stcvafslva dmgnprgaig nwsmsfwcvc famtfiiaiv eccrhpshfl
       61 ffwynisvty acyaalicls asiiysityv qfvpygpnrd raiaatafsc iasvlyviev
      121 agmwawyelk eiffykhtlr allkvletfv agvifaflsn tslylhqpal ewcvavysic
      181 filaavvlll dlaeweymls gpfsifqlvi tllsillyvs alvlwplyqf yeelggqpqr
      241 ssdgdcrdel tydmctwdqr lavavltain llvyvadlvy lacqvfl
//
LOCUS       XP_061015584             288 aa            linear   MAM 02-DEC-2023
DEFINITION  myeloid-associated differentiation marker-like [Dama dama].
ACCESSION   XP_061015584
VERSION     XP_061015584.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159601.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..288
                     /product="myeloid-associated differentiation marker-like"
                     /calculated_mol_wt=31948
     Region          4..118
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     Region          134..279
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     CDS             1..288
                     /gene="LOC133068360"
                     /coded_by="XM_061159601.1:271..1137"
                     /db_xref="GeneID:133068360"
ORIGIN      
        1 mgcclrqlql fstcmafslg asvgtwkgai gnwsmfiwcf cfvltllili velcgleghf
       61 pfswdnflit cncysallcl sasiiypiiy vqllsnshdw drtiistafs ciafvayamd
      121 vtwtraqpnm itgymatvpg llkgletiva cvifvflsnt slylhqpale wcvavysicf
      181 ilssvailln lgkcdnrlsi pfsifqlvlt llsvllytta lllwplyqfn eelgrqpqrs
      241 sdvncssglp tsvctwdqql avvsltainl liyvtdlvfs arlnfnss
//
LOCUS       XP_061015585             360 aa            linear   MAM 02-DEC-2023
DEFINITION  hyaluronan and proteoglycan link protein 3 [Dama dama].
ACCESSION   XP_061015585
VERSION     XP_061015585.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159602.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..360
                     /product="hyaluronan and proteoglycan link protein 3"
                     /calculated_mol_wt=40888
     Region          52..168
                     /region_name="Ig_LP_like"
                     /note="Immunoglobulin (Ig)-like domain of human cartilage
                     link protein (LP), and similar domains; cd05877"
                     /db_xref="CDD:409461"
     Region          52..55
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409461"
     Region          58..60
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409461"
     Region          64..72
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409461"
     Region          85..91
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409461"
     Region          98..101
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409461"
     Region          109..112
                     /region_name="putative Ig strand C'"
                     /note="putative Ig strand C' [structural motif]"
                     /db_xref="CDD:409461"
     Region          117..122
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409461"
     Region          128..134
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409461"
     Region          142..149
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409461"
     Region          159..168
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409461"
     Region          166..260
                     /region_name="Link_domain_HAPLN_module_1"
                     /note="this link domain is found in the first link module
                     of proteins similar to the vertebrate HAPLN (hyaluronan/HA
                     and proteoglycan binding link) protein family which
                     includes cartilage link protein. The link domain is a
                     HA-binding domain. HAPLNs contain two...; cd03518"
                     /db_xref="CDD:239595"
     Site            176..177
                     /site_type="other"
                     /note="putative hyaluronan binding site [chemical
                     binding]"
                     /db_xref="CDD:239595"
     Region          268..357
                     /region_name="Link_domain_HAPLN_module_2"
                     /note="this link domain is found in the second link module
                     of proteins similar to the vertebrate HAPLN (hyaluronan/HA
                     and proteoglycan binding link) protein family which
                     includes cartilage link protein. The link domain is a
                     HA-binding domain. HAPLNs contain two...; cd03519"
                     /db_xref="CDD:239596"
     Site            274..275
                     /site_type="other"
                     /note="putative hyaluronan binding site [chemical
                     binding]"
                     /db_xref="CDD:239596"
     CDS             1..360
                     /gene="HAPLN3"
                     /coded_by="XM_061159602.1:283..1365"
                     /db_xref="GeneID:133068361"
ORIGIN      
        1 mglrlpipll llgcvsglpf yngfyysnra ngrnlgngys egifngvklv vetpeetlfs
       61 hrganvtlpc ryhyepalas prpvrikwwk lsengvpeqd vlvaiglrqr tfgdyrgrvh
      121 lrqdrarevs leirdlrled ygryrcevid gledesglve lelrgvvfpy qhpqgrykfn
      181 fheaqqacee qdavvasfeq lfraweegld wcnagwlqda svqypitqar hpcggpglap
      241 gvrsygprhh rlhrydvfcf avalrgqvyy lehpekltlt eareacredg aqiakvgqlf
      301 aawkfrgldr cdagwladgs arypvahprs ncgtlepgvr sfgfpdphsr kygvycyrph
//
LOCUS       XP_061015586             317 aa            linear   MAM 02-DEC-2023
DEFINITION  retinaldehyde-binding protein 1 [Dama dama].
ACCESSION   XP_061015586
VERSION     XP_061015586.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159603.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..317
                     /product="retinaldehyde-binding protein 1"
                     /calculated_mol_wt=36468
     Region          60..117
                     /region_name="CRAL_TRIO_N"
                     /note="CRAL/TRIO, N-terminal domain; smart01100"
                     /db_xref="CDD:215024"
     Region          141..292
                     /region_name="SEC14"
                     /note="Sec14p-like lipid-binding domain; cd00170"
                     /db_xref="CDD:469559"
     CDS             1..317
                     /gene="RLBP1"
                     /coded_by="XM_061159603.1:79..1032"
                     /db_xref="GeneID:133068363"
ORIGIN      
        1 msegagtfrm vpeeeqelra qlerlttkdh gpvfgpcsql prhtlqkakd elnekeetre
       61 eavrelqelv qaeaasgqel avavaervqg kdsafflrfi rarkfhvgra yellrgyvnf
      121 rlqypelfds lsleairctv eagypgvlst rdkygrvvml fnienwdsee itfdeilqay
      181 cfilekllen eetqingfci ienfkgftmq qasglrpsdl rkmvdmlqds fparfkaihf
      241 iyqpwyfttt ynvvkpflks kllqrvfvhg edlssfyqef dedilpsdfg gtlpkydgka
      301 vaeqlfgprd qtentaf
//
LOCUS       XP_061015587             460 aa            linear   MAM 02-DEC-2023
DEFINITION  ammonium transporter Rh type C [Dama dama].
ACCESSION   XP_061015587
VERSION     XP_061015587.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159604.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..460
                     /product="ammonium transporter Rh type C"
                     /calculated_mol_wt=50832
     Region          61..436
                     /region_name="Ammonium_transp"
                     /note="Ammonium Transporter Family; cl03012"
                     /db_xref="CDD:445985"
     CDS             1..460
                     /gene="RHCG"
                     /coded_by="XM_061159604.1:1..1383"
                     /db_xref="GeneID:133068364"
ORIGIN      
        1 miwntnlrwr lpvvclllev vmialfgvfv rydmdadphw veekaiknlt tdlenefyyr
       61 ypsfqdvhvm ifvgfgflmt flqrygyssv gfnfllaafg iqwallmqgw lhsfdgryil
      121 vnvenlinad fcvgsvcvaf gavlgkvspv qllimtllqv tlfsineyil lnllevkdag
      181 gsmtihafga yfgltvawil yrpnlnqsed rkssvyhsdl famigtlflw mywpsfnsai
      241 snhgdaqhra vintycslaa cvltsvalss alhrkgkldm vhiqnaslag gvglgtvael
      301 milpfgslli gficgivstl gfvyltpfle srlriqdtcg vhnlhglpgi iggvagavma
      361 gianidlyge eglaytfgve rsktnwnpnm qgrfqaaglf vslamalvgg iivgvilrlp
      421 fwgqppdenc fddavyweip kepkstaihp edssfrpsep
//
LOCUS       XP_061015588             689 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 93 [Dama dama].
ACCESSION   XP_061015588
VERSION     XP_061015588.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159605.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..689
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..689
                     /product="WD repeat-containing protein 93"
                     /calculated_mol_wt=77661
     CDS             1..689
                     /gene="WDR93"
                     /coded_by="XM_061159605.1:181..2250"
                     /db_xref="GeneID:133068365"
ORIGIN      
        1 maspkgsrsq kmklpiftrk gtlevpspte kdwskddedd wvfkdpdqeq dslpqpyrmi
       61 nkmvnslfdr sweiieerdt sktaelrrtq ptiyhplres klntmpncmd vsqdyvfigg
      121 skgfsiynlh nakqlyvwek lkvdvisiwa tdlgseilia pvdetgivrl fyfykdglyl
      181 ikaineseda skqttcikme iskggnfaal llqgagdiwl dvyklpkesw ikevqypqla
      241 vntkkkvrqq lqlnipdsvt adsldmdmni sfkgdvklsl pvqimkikpp kpitgttfks
      301 pleafakiag crglgsgqnh yikasqwekr eailkatykk yldgewepep ismatfyfll
      361 psrvipmpag vkrppglacv lgvhwtdhhn fffyslnrtl kdkadpegvw pcaapivgsq
      421 lspcssylvl acedgvlslw dlaqgltlgv valpekcfcq sihflkyflv hkgqnvypeg
      481 svkchmkcvv lctdaslhlv tasgvqnsti sllverpvky ldeaicavap vqalpgmvlt
      541 fsrdgsvflm dvaksqivcs fapprsysla apwnpvfvvs lhhpcfllrg dhpdeigsas
      601 kaedipnsif yfnfedypll enfsrnctip qasildpptf aqalpleerc ekffqksiqn
      661 lakskvkeee hwtrlrrysl llqkedlkk
//
LOCUS       XP_061015589             689 aa            linear   MAM 02-DEC-2023
DEFINITION  WD repeat-containing protein 93 [Dama dama].
ACCESSION   XP_061015589
VERSION     XP_061015589.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159606.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..689
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..689
                     /product="WD repeat-containing protein 93"
                     /calculated_mol_wt=77661
     CDS             1..689
                     /gene="WDR93"
                     /coded_by="XM_061159606.1:101..2170"
                     /db_xref="GeneID:133068365"
ORIGIN      
        1 maspkgsrsq kmklpiftrk gtlevpspte kdwskddedd wvfkdpdqeq dslpqpyrmi
       61 nkmvnslfdr sweiieerdt sktaelrrtq ptiyhplres klntmpncmd vsqdyvfigg
      121 skgfsiynlh nakqlyvwek lkvdvisiwa tdlgseilia pvdetgivrl fyfykdglyl
      181 ikaineseda skqttcikme iskggnfaal llqgagdiwl dvyklpkesw ikevqypqla
      241 vntkkkvrqq lqlnipdsvt adsldmdmni sfkgdvklsl pvqimkikpp kpitgttfks
      301 pleafakiag crglgsgqnh yikasqwekr eailkatykk yldgewepep ismatfyfll
      361 psrvipmpag vkrppglacv lgvhwtdhhn fffyslnrtl kdkadpegvw pcaapivgsq
      421 lspcssylvl acedgvlslw dlaqgltlgv valpekcfcq sihflkyflv hkgqnvypeg
      481 svkchmkcvv lctdaslhlv tasgvqnsti sllverpvky ldeaicavap vqalpgmvlt
      541 fsrdgsvflm dvaksqivcs fapprsysla apwnpvfvvs lhhpcfllrg dhpdeigsas
      601 kaedipnsif yfnfedypll enfsrnctip qasildpptf aqalpleerc ekffqksiqn
      661 lakskvkeee hwtrlrrysl llqkedlkk
//
LOCUS       XP_061015590             256 aa            linear   MAM 02-DEC-2023
DEFINITION  mesoderm posterior protein 1 [Dama dama].
ACCESSION   XP_061015590
VERSION     XP_061015590.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159607.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..256
                     /product="mesoderm posterior protein 1"
                     /calculated_mol_wt=26170
     Region          83..147
                     /region_name="bHLH_TS_Mesp"
                     /note="basic helix-loop-helix (bHLH) domain found in the
                     mesoderm posterior protein (Mesp) family; cd18938"
                     /db_xref="CDD:381508"
     Site            order(84,88,90..92,94,99,119..122)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381508"
     Site            order(97..98,101..102,104..105,123,126,130,132..133,137,
                     139..140)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381508"
     CDS             1..256
                     /gene="MESP1"
                     /coded_by="XM_061159607.1:451..1221"
                     /db_xref="GeneID:133068366"
ORIGIN      
        1 maqslcppla eswmlaagwg paqppqaaga dcgcspassp dswgsvpacs pvpspgspat
       61 raslrgpaag rrgarggrlg agqrqsaser eklrmrtlar alhelrrflp psvapagqsl
      121 tkietlrlai ryighlsavl glsedslqrr rrqrgdappp rgcalcpdgr paeaqtlgcc
      181 sgsaagaavs wgsppacpgv laapelrdpp vlndrgaacp egpamepsps splfpgdvla
      241 lletsmpllp lewppa
//
LOCUS       XP_061015591             131 aa            linear   MAM 02-DEC-2023
DEFINITION  neuromedin-B isoform X1 [Dama dama].
ACCESSION   XP_061015591
VERSION     XP_061015591.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159608.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..131
                     /product="neuromedin-B isoform X1"
                     /calculated_mol_wt=13893
     Region          47..60
                     /region_name="Bombesin"
                     /note="Bombesin-like peptide; pfam02044"
                     /db_xref="CDD:280257"
     CDS             1..131
                     /gene="NMB"
                     /coded_by="XM_061159608.1:39..434"
                     /db_xref="GeneID:133068369"
ORIGIN      
        1 mtlraggarl lgglllftll aagaaplswd lpeprsrask irvhprgnlw atghfmgkks
       61 leppspsllg taphtslrdq tprlshhllr vllqkkalgm tlsgpaphtq eaaganaaev
      121 mllirktrqh g
//
LOCUS       XP_061015592             121 aa            linear   MAM 02-DEC-2023
DEFINITION  neuromedin-B isoform X2 [Dama dama].
ACCESSION   XP_061015592
VERSION     XP_061015592.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159609.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..121
                     /product="neuromedin-B isoform X2"
                     /calculated_mol_wt=13079
     Region          47..60
                     /region_name="Bombesin"
                     /note="Bombesin-like peptide; pfam02044"
                     /db_xref="CDD:280257"
     CDS             1..121
                     /gene="NMB"
                     /coded_by="XM_061159609.1:39..404"
                     /db_xref="GeneID:133068369"
ORIGIN      
        1 mtlraggarl lgglllftll aagaaplswd lpeprsrask irvhprgnlw atghfmgkks
       61 leppspsllg taphtslrdq tprlshhllr vllqkkalgm tlsgpaphtq hrrllvqmlq
      121 k
//
LOCUS       XP_061015593            1085 aa            linear   MAM 02-DEC-2023
DEFINITION  AP-3 complex subunit beta-2 isoform X1 [Dama dama].
ACCESSION   XP_061015593
VERSION     XP_061015593.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159610.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1085
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1085
                     /product="AP-3 complex subunit beta-2 isoform X1"
                     /calculated_mol_wt=119445
     Region          34..590
                     /region_name="Adaptin_N"
                     /note="Adaptin N terminal region; pfam01602"
                     /db_xref="CDD:396262"
     Region          111..139
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          145..173
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          182..208
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          806..950
                     /region_name="AP3B1_C"
                     /note="Clathrin-adaptor complex-3 beta-1 subunit
                     C-terminal; pfam14796"
                     /db_xref="CDD:464319"
     CDS             1..1085
                     /gene="AP3B2"
                     /coded_by="XM_061159610.1:285..3542"
                     /db_xref="GeneID:133068372"
ORIGIN      
        1 msaapayned kggsagsgep eyghdpasgg ifssdykrhd dlkamldtnk dslkleamkr
       61 ivamiargkn asdlfpavvk nvacknievk klvyvylvry aeeqqdlall sistfqrglk
      121 dpnqlirasa lrvlssirvp iivpimmlai keaasdmspy vrktaahaip klysldsdqk
      181 dqlieviekl ladkttlvag svvmafeevc peridlihkn yrklcnllid veewgqvvii
      241 smltryartq flsptqnesl leenpekafy gseedeakgp gseeaastal parkpyvmdp
      301 dhrlllrntk pllqsrsaav vmavaqlyfh lapkaevgvi akalvrllrs hsevqyvvlq
      361 nvatmsikrr gmfepylksf yirstdptqi kilklevltn lanetniptv lrefqtyirs
      421 mdkdfvaati qaigrcatni grvrdtclng lvqllsnrde lvvaesvvvi kkllqmqpaq
      481 hgeiikhlak ltdniqvpma rasilwlige ycehvpriap dvlrkmaksf taeedivklq
      541 vinlaaklyl tnskqtkllt qyvlslakyd qnydirdrar ftrqlivpse qggalsrhak
      601 klflapkpap vlessfkdrd hfqlgslshl lnakatgyqe lpdwpeeapd psvrnvevpe
      661 wtkcsnrekr kekekpfysd segesgptes adsdpesese sesksssesg sgesssesdn
      721 edqdedeekg rsseseqsee egkkkkmkkk kkvpegqegg sssdegsdss nsssesemts
      781 eteeeqvepa swrkktppss ksapatkevs lldledftpp siqpvspptv vstslaadle
      841 gltltdsplv psllspvsga grqellhrva geglavdytf srqpfsgdph mvsvhiyfsn
      901 ssdtpikglh mgtpklppgi siqefpeies lapgesatvv mginfcdstq aanfqlctqt
      961 rqfyvsiqpp vgelmapvfl senefkkeqa kltgmneite kltlpdtcrs dhvvvqkvta
     1021 tanlgrvpcg tsdeyrfagr tltsgslvll tldarptgaa qltvnsekmv igtmlvkdvv
     1081 qaltq
//
LOCUS       XP_061015594            1047 aa            linear   MAM 02-DEC-2023
DEFINITION  AP-3 complex subunit beta-2 isoform X2 [Dama dama].
ACCESSION   XP_061015594
VERSION     XP_061015594.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159611.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1047
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1047
                     /product="AP-3 complex subunit beta-2 isoform X2"
                     /calculated_mol_wt=115192
     Region          34..590
                     /region_name="Adaptin_N"
                     /note="Adaptin N terminal region; pfam01602"
                     /db_xref="CDD:396262"
     Region          111..139
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          145..173
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          182..208
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          806..912
                     /region_name="AP3B1_C"
                     /note="Clathrin-adaptor complex-3 beta-1 subunit
                     C-terminal; pfam14796"
                     /db_xref="CDD:464319"
     CDS             1..1047
                     /gene="AP3B2"
                     /coded_by="XM_061159611.1:285..3428"
                     /db_xref="GeneID:133068372"
ORIGIN      
        1 msaapayned kggsagsgep eyghdpasgg ifssdykrhd dlkamldtnk dslkleamkr
       61 ivamiargkn asdlfpavvk nvacknievk klvyvylvry aeeqqdlall sistfqrglk
      121 dpnqlirasa lrvlssirvp iivpimmlai keaasdmspy vrktaahaip klysldsdqk
      181 dqlieviekl ladkttlvag svvmafeevc peridlihkn yrklcnllid veewgqvvii
      241 smltryartq flsptqnesl leenpekafy gseedeakgp gseeaastal parkpyvmdp
      301 dhrlllrntk pllqsrsaav vmavaqlyfh lapkaevgvi akalvrllrs hsevqyvvlq
      361 nvatmsikrr gmfepylksf yirstdptqi kilklevltn lanetniptv lrefqtyirs
      421 mdkdfvaati qaigrcatni grvrdtclng lvqllsnrde lvvaesvvvi kkllqmqpaq
      481 hgeiikhlak ltdniqvpma rasilwlige ycehvpriap dvlrkmaksf taeedivklq
      541 vinlaaklyl tnskqtkllt qyvlslakyd qnydirdrar ftrqlivpse qggalsrhak
      601 klflapkpap vlessfkdrd hfqlgslshl lnakatgyqe lpdwpeeapd psvrnvevpe
      661 wtkcsnrekr kekekpfysd segesgptes adsdpesese sesksssesg sgesssesdn
      721 edqdedeekg rsseseqsee egkkkkmkkk kkvpegqegg sssdegsdss nsssesemts
      781 eteeeqvepa swrkktppss ksapatkevs lldledftpp siqpvspptv vstslaadle
      841 gltltdsplv psagtrlgla lccsdtpikg lhmgtpklpp gisiqefpei eslapgesat
      901 vvmginfcds tqaanfqlct qtrqfyvsiq ppvgelmapv flsenefkke qakltgmnei
      961 tekltlpdtc rsdhvvvqkv tatanlgrvp cgtsdeyrfa grtltsgslv lltldarptg
     1021 aaqltvnsek mvigtmlvkd vvqaltq
//
LOCUS       XP_061015595             610 aa            linear   MAM 02-DEC-2023
DEFINITION  AP-3 complex subunit beta-2 isoform X3 [Dama dama].
ACCESSION   XP_061015595
VERSION     XP_061015595.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159612.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..610
                     /product="AP-3 complex subunit beta-2 isoform X3"
                     /calculated_mol_wt=66565
     Region          <3..115
                     /region_name="Adaptin_N"
                     /note="Adaptin N terminal region; pfam01602"
                     /db_xref="CDD:396262"
     Region          331..475
                     /region_name="AP3B1_C"
                     /note="Clathrin-adaptor complex-3 beta-1 subunit
                     C-terminal; pfam14796"
                     /db_xref="CDD:464319"
     CDS             1..610
                     /gene="AP3B2"
                     /coded_by="XM_061159612.1:84..1916"
                     /db_xref="GeneID:133068372"
ORIGIN      
        1 mqpaqhgeii khlakltdni qvpmarasil wligeycehv priapdvlrk maksftaeed
       61 ivklqvinla aklyltnskq tklltqyvls lakydqnydi rdrarftrql ivpseqggal
      121 srhakklfla pkpapvless fkdrdhfqlg slshllnaka tgyqelpdwp eeapdpsvrn
      181 vevpewtkcs nrekrkekek pfysdseges gptesadsdp esesesesks ssesgsgess
      241 sesdnedqde deekgrsses eqseeegkkk kmkkkkkvpe gqeggsssde gsdssnssse
      301 semtseteee qvepaswrkk tppssksapa tkevslldle dftppsiqpv spptvvstsl
      361 aadlegltlt dsplvpslls pvsgagrqel lhrvagegla vdytfsrqpf sgdphmvsvh
      421 iyfsnssdtp ikglhmgtpk lppgisiqef peieslapge satvvmginf cdstqaanfq
      481 lctqtrqfyv siqppvgelm apvflsenef kkeqakltgm neitekltlp dtcrsdhvvv
      541 qkvtatanlg rvpcgtsdey rfagrtltsg slvlltldar ptgaaqltvn sekmvigtml
      601 vkdvvqaltq
//
LOCUS       XP_061015596             175 aa            linear   MAM 02-DEC-2023
DEFINITION  AP-3 complex subunit beta-2 isoform X4 [Dama dama].
ACCESSION   XP_061015596
VERSION     XP_061015596.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159613.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..175
                     /product="AP-3 complex subunit beta-2 isoform X4"
                     /calculated_mol_wt=18735
     Region          <1..40
                     /region_name="AP3B1_C"
                     /note="Clathrin-adaptor complex-3 beta-1 subunit
                     C-terminal; pfam14796"
                     /db_xref="CDD:464319"
     CDS             1..175
                     /gene="AP3B2"
                     /coded_by="XM_061159613.1:121..648"
                     /db_xref="GeneID:133068372"
ORIGIN      
        1 mgtpklppgi siqefpeies lapgesatvv mginfcdstq aanfqlctqt rqfyvsiqpp
       61 vgelmapvfl senefkkeqa kltgmneite kltlpdtcrs dhvvvqkvta tanlgrvpcg
      121 tsdeyrfagr tltsgslvll tldarptgaa qltvnsekmv igtmlvkdvv qaltq
//
LOCUS       XP_061015597             364 aa            linear   MAM 02-DEC-2023
DEFINITION  endophilin-A3 isoform X1 [Dama dama].
ACCESSION   XP_061015597
VERSION     XP_061015597.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159614.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..364
                     /product="endophilin-A3 isoform X1"
                     /calculated_mol_wt=40734
     Region          25..247
                     /region_name="BAR_Endophilin_A3"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of
                     Endophilin-A3; cd07615"
                     /db_xref="CDD:153299"
     Site            order(38..39,42..43,45..46,49..50,53,57,60..61,89..90,
                     92..93,96..97,100,103..104,108..110,113..114,208..209,
                     211..213,215..216,219,222..223,225..227,229..230,233..234,
                     236..237,240,244)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153299"
     Site            order(45,53,65,67,152,156,159,164..165,173..174,177,184)
                     /site_type="other"
                     /note="putative membrane interaction site"
                     /db_xref="CDD:153299"
     Region          305..359
                     /region_name="SH3_Endophilin_A"
                     /note="Src homology 3 domain of Endophilin-A; cd11803"
                     /db_xref="CDD:212737"
     Site            order(311,313,316,320,338..339,352,354..355)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212737"
     CDS             1..364
                     /gene="SH3GL3"
                     /coded_by="XM_061159614.1:93..1187"
                     /db_xref="GeneID:133068374"
ORIGIN      
        1 msvaglkkqf hkasqlfsek isgvegtkld defldmerki ditnkavaei lskateylqp
       61 npayraklgm lntvskirgq vkttgypqte gllgdcmlky gkelgegstf gsalievges
      121 mklmaevkds ldinvkqtfi dplqllqdkd lkeighhlkk legrrldydy kkkrvgkipd
      181 eevrqavekf eeskelaers mfnflendve qvsqlavfve aaldyhrqst eilqelqskl
      241 qmrisaasnv pkreykprpi krspselngv stassakttv sesgkfkikv padslsgsnv
      301 pmdqpccrgl ydfepenqge lgfkegdiit ltnqidenwy egilhgesgf fpinyveviv
      361 plpq
//
LOCUS       XP_061015598             347 aa            linear   MAM 02-DEC-2023
DEFINITION  endophilin-A3 isoform X2 [Dama dama].
ACCESSION   XP_061015598
VERSION     XP_061015598.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159615.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..347
                     /product="endophilin-A3 isoform X2"
                     /calculated_mol_wt=38959
     Region          25..247
                     /region_name="BAR_Endophilin_A3"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of
                     Endophilin-A3; cd07615"
                     /db_xref="CDD:153299"
     Site            order(38..39,42..43,45..46,49..50,53,57,60..61,89..90,
                     92..93,96..97,100,103..104,108..110,113..114,208..209,
                     211..213,215..216,219,222..223,225..227,229..230,233..234,
                     236..237,240,244)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153299"
     Site            order(45,53,65,67,152,156,159,164..165,173..174,177,184)
                     /site_type="other"
                     /note="putative membrane interaction site"
                     /db_xref="CDD:153299"
     Region          288..342
                     /region_name="SH3_Endophilin_A"
                     /note="Src homology 3 domain of Endophilin-A; cd11803"
                     /db_xref="CDD:212737"
     Site            order(294,296,299,303,321..322,335,337..338)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212737"
     CDS             1..347
                     /gene="SH3GL3"
                     /coded_by="XM_061159615.1:93..1136"
                     /db_xref="GeneID:133068374"
ORIGIN      
        1 msvaglkkqf hkasqlfsek isgvegtkld defldmerki ditnkavaei lskateylqp
       61 npayraklgm lntvskirgq vkttgypqte gllgdcmlky gkelgegstf gsalievges
      121 mklmaevkds ldinvkqtfi dplqllqdkd lkeighhlkk legrrldydy kkkrvgkipd
      181 eevrqavekf eeskelaers mfnflendve qvsqlavfve aaldyhrqst eilqelqskl
      241 qmrisaasnv pkreykprpi krspselngv stassakttg snvpmdqpcc rglydfepen
      301 qgelgfkegd iitltnqide nwyegilhge sgffpinyve vivplpq
//
LOCUS       XP_061015599             295 aa            linear   MAM 02-DEC-2023
DEFINITION  endophilin-A3 isoform X3 [Dama dama].
ACCESSION   XP_061015599
VERSION     XP_061015599.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159616.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..295
                     /product="endophilin-A3 isoform X3"
                     /calculated_mol_wt=33052
     Region          <1..178
                     /region_name="BAR"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain, a
                     dimerization module that binds membranes and detects
                     membrane curvature; cl12013"
                     /db_xref="CDD:472257"
     Region          236..290
                     /region_name="SH3_Endophilin_A"
                     /note="Src homology 3 domain of Endophilin-A; cd11803"
                     /db_xref="CDD:212737"
     Site            order(242,244,247,251,269..270,283,285..286)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212737"
     CDS             1..295
                     /gene="SH3GL3"
                     /coded_by="XM_061159616.1:147..1034"
                     /db_xref="GeneID:133068374"
ORIGIN      
        1 mlntvskirg qvkttgypqt egllgdcmlk ygkelgegst fgsalievge smklmaevkd
       61 sldinvkqtf idplqllqdk dlkeighhlk klegrrldyd ykkkrvgkip deevrqavek
      121 feeskelaer smfnflendv eqvsqlavfv eaaldyhrqs teilqelqsk lqmrisaasn
      181 vpkreykprp ikrspselng vstassaktt vsesgkfkik vpadslsgsn vpmdqpccrg
      241 lydfepenqg elgfkegdii tltnqidenw yegilhgesg ffpinyvevi vplpq
//
LOCUS       XP_061015600             993 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: zinc finger protein basonuclin-1 [Dama dama].
ACCESSION   XP_061015600
VERSION     XP_061015600.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159617.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..993
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..993
                     /product="LOW QUALITY PROTEIN: zinc finger protein
                     basonuclin-1"
                     /calculated_mol_wt=109474
     Region          359..380
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(359,362,375,380)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          387..405
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          929..950
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Site            order(934,936,938,940..941,944..945,948,964,966..968,
                     970..971,975)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275370"
     Region          957..975
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     CDS             1..993
                     /gene="BNC1"
                     /coded_by="XM_061159617.1:1..2982"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /db_xref="GeneID:133068375"
ORIGIN      
        1 mrrrppswgg rgatrdgdtr rxprhcsgrr maeaigctln cscqsfkpgk inhrqceqcr
       61 hgwvahalsk lripavypts qveivqsnvv fdisslmlyg tqaipvrlki lldrlfsvlk
      121 qdevlqilha ldwtlqdyir gyvlqdasgk vldhwsimts eeevatlqqf lrfgetksiv
      181 elmaiqekee qsvvippsta nvdirafies cshrsaslpa pmdkgnpssv hpfenlinnm
      241 tfmlpfqffn plppaligsl pdpyvleqsq dqsqdpkqev hgafpdssfl tssstpfqve
      301 kdpclscpda vtkkedsthf sdsssysiit klertqlspe akvkperssl stkkgrvfct
      361 acektfydkg tlkihynavh lkikhkctie gcnmvfsslr srnrhsanpn prlhmpmnrn
      421 nrdkdlrggl tlaasesakr pglgvtppdc rplpgyagal ddpqsqptfp slshngvlfp
      481 nlktvqpvlp fyrspatpae lantpgmlps lpllsssipe qlasnetpfd tlpkkksrks
      541 smpikiekea vetadekrqp lssdedmplq vvsedeletc spqsdgapae phtpagsser
      601 prveeerpcy lgpgiessga irqtpeqath nseretgqks vlntvprdae edgrephltt
      661 rvepcvpfpd yiklqqhlla gglfgalstq gmafpcfeds kepehlgqpa svrskeenrf
      721 qcdickktfk nacgvkmhqk nmharemhtc tvegckatfp srrsrdrhss nlnlhqkvlp
      781 qealesgedp fraayllkdt aqeayqeaaf tpqasqtsvi fkgmsrmgsl vyplaqvhsa
      841 glqsytsglp segtvldlst tssvksesss hsswdsdgas eegavltedc dgncdgpglv
      901 pgedyplcvl mgkadqslas lpsglpltch lcqktysnkg tfrahyktvh lrqlhkckvp
      961 gcntmfssvr srnrhsqnpn lhrsltssps hlr
//
LOCUS       XP_061015601            1257 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-specific guanine nucleotide-releasing factor 1 [Dama dama].
ACCESSION   XP_061015601
VERSION     XP_061015601.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159618.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1257
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1257
                     /product="ras-specific guanine nucleotide-releasing factor
                     1"
                     /calculated_mol_wt=142925
     Region          19..154
                     /region_name="PH_RasGRF1_2"
                     /note="Ras-specific guanine nucleotide-releasing factors 1
                     and 2 Pleckstrin homology (PH) domain; cd13261"
                     /db_xref="CDD:270081"
     Region          244..425
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; smart00325"
                     /db_xref="CDD:214619"
     Site            order(247,251,348,375..376,379..380,382..383,386..387,
                     390..391,394,420,424)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          431..582
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          634..>683
                     /region_name="RasGEF_N"
                     /note="RasGEF N-terminal motif; pfam00618"
                     /db_xref="CDD:459873"
     Region          <922..991
                     /region_name="REM"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     GTPases; N-terminal domain (RasGef_N), also called REM
                     domain (Ras exchanger motif). This domain is common in
                     nucleotide exchange factors for Ras-like small GTPases and
                     is typically found immediately...; cl02520"
                     /db_xref="CDD:470601"
     Region          1018..1254
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases; smart00147"
                     /db_xref="CDD:214539"
     Site            order(1051..1053,1063..1064,1066..1068,1070..1071,
                     1074..1075,1078,1111,1114..1115,1117..1119,1121..1124,
                     1126..1127,1147,1150,1155..1157,1160,1173..1175,
                     1178..1180,1182..1184,1186..1189,1204,1208,1242,
                     1245..1246)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     CDS             1..1257
                     /gene="RASGRF1"
                     /coded_by="XM_061159618.1:1..3774"
                     /db_xref="GeneID:133068376"
ORIGIN      
        1 mqkgirlndg hvaslgllar kdgtrkgyls krssdntkwq tkwfallqnl lfyfesdsss
       61 rpsglylleg cvcdrapspk ptlsakeple kqhyftvnfs henqkalelr tedakdcdew
      121 vaaiahasyr tlatehealm qkylhllqiv etektvakql rqqiedgeve ierlkaeias
      181 llkdneriqs tqtvtpnded sdikkikkvq sflrgwlcrr kwktiiqdyi rsphadsmrk
      241 rnqvvfsmle aeaeyvqqlh ilvnnflrpl rmaasskkpp ithddvssif lnsetimflh
      301 qifyqglkar isswptlvla dlfdillpml niyqefvrnh qyslqilahc kqnrdfdkll
      361 khyeakpdce ertletflty pmfqipryil tlhellahtp hehvernsld yakskleels
      421 rimhdevset enirknlaie rmiiegceil ldtsqtfvrq gsliqvpmse kgkitrgrlg
      481 slslkkeger qcflfskhli ictrgsggkl hltkngvisl idctlleepe steeeakgsg
      541 qdvdhldfki gvepkdsppf tvilvassrq ekaawtsdis qcvdnircng lmmnafeens
      601 kvtvpqmiks daslycddvd irfsktmnsc kvlqiryasv erllerltdl rflsidflnt
      661 flhsyrvftt avvvldklit iyrkpisaip arslellfas gqnnkllyge ppkspratrk
      721 fssppplsit ktsspsrrrk lslnipiitg gkaldlaals cssngytsmy samspfgkat
      781 ldpsklyvss sfankipdeg dantekseep salskqssev smreesdndq nqsddgdaet
      841 sptkspttpk svksknssef plfsynngvv mtscreldsn rsalsaasaf aiataganeg
      901 tpnkekyrrm slasagfppd qrngdkefvi rraatnrvln vlrhwvskhs qdfetndelk
      961 ckvisfleev mhdpelltqe rkaaaniirt ltqddpgdnq itleeitqma egvkaepfen
     1021 hsaleiaeql tlldhlvfkk ipyeeffgqg wmkleksert pyimkttkhf ndisnliase
     1081 ivrnedinar vstiekwvav adicrclhny navleitssm nrsaifrlkk twlkvskqtk
     1141 alidklqklv ssegrfknlr ealkncdppc vpylgmyltd lafieegtpn ytedglvnfs
     1201 kmrmishiir eirqfqqtay kiehqakvtq ylldqsfvmd eeslyesslr iepklpt
//
LOCUS       XP_061015602             535 aa            linear   MAM 02-DEC-2023
DEFINITION  ankyrin repeat domain-containing protein 34C [Dama dama].
ACCESSION   XP_061015602
VERSION     XP_061015602.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159619.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..535
                     /product="ankyrin repeat domain-containing protein 34C"
                     /calculated_mol_wt=57852
     Region          <34..155
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          43..82
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          84..116
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..535
                     /gene="ANKRD34C"
                     /coded_by="XM_061159619.1:1..1608"
                     /db_xref="GeneID:133068379"
ORIGIN      
        1 mmdndtelrt dgnsllkavw lgrlrltrll leggayines ndkgetalmv acitkhvdqq
       61 siskskmvky lldnradpni qdksgktali hacirraggd vvslllenga dpsledrtga
      121 salvyainad dkdalrhlld ackakgkevi iittdksssg tkttkqylnv ppspkeedrq
      181 spppcaspse velkapglgs ppsekeddff slqsghpssc ntakalnepg sparkvgnlk
      241 rarlpqlkrl qsepwgltap svlaascvrq dethgmgmdg evksigdvsf prrgplsrts
      301 sidgkdaslv hmvteqvvki pvssapaswk aayektqaph prlarrgtlp idqekvgicp
      361 tgpsalkdav tlkrlendly dlelqpgadl pnpislesgk gpldrkklns shlslfqgsr
      421 esldavssts pnsarrrpph llerrgsgtl lldrisqtrp gflpplnvnl nppipdirvs
      481 skpssplasg lksivpvaps spkrvdlrsk kkllrrhsmq veqmkqlsdf eeimt
//
LOCUS       XP_061015603             917 aa            linear   MAM 02-DEC-2023
DEFINITION  major intrinsically disordered Notch2-binding receptor 1 [Dama
            dama].
ACCESSION   XP_061015603
VERSION     XP_061015603.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159620.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..917
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..917
                     /product="major intrinsically disordered Notch2-binding
                     receptor 1"
                     /calculated_mol_wt=102366
     Region          760..912
                     /region_name="MINAR1_C"
                     /note="MINAR1 C-terminal domain; pfam06789"
                     /db_xref="CDD:462010"
     CDS             1..917
                     /gene="MINAR1"
                     /coded_by="XM_061159620.1:128..2881"
                     /db_xref="GeneID:133068380"
ORIGIN      
        1 metnqetslf lvkileelds kqntvsyqdl ckslcarfdl sqlaklrsvl fytacldpnf
       61 patlfkdkmk cavnnqqskk imvaadivti fnliqmngga akeklpggqq kmrkkdasfd
      121 scrsdteics vaeceplnce lsdrpfsrgy psrqsskcrk vdckdcpqfi pasepdfllg
      181 vskdvknraa sldrlqalap ysvaspqpce mqrtyfpmnl esesmsdqds lplpqgikqn
      241 fisndepfvv qscvqkrnif kedfhnlmav spglaspank aegerrksqa rkeshktpfp
      301 hhsfempyss qylnpeyspv pdkrrakhes lddlqastyf gptpvmgtqe arrcpgksgk
      361 qtpwpaksws lnteevpdfe rsffnrnpse eklrypnsns qtpnfptpdr cpayltpqdq
      421 qpilpvgysa kpnglkskei pppvdlekhe pvkkfkdksi scasgqlssd tssvgtqtdl
      481 hvlepktgkd lctpgqgkys drhavkhsdd dsevvsddis difrflddms isgstgvmqs
      541 scynstgsls qlhksdcdss pehhltritn glpggqgekg srpenshhse eelktsvckl
      601 vlrigeierk leslsgvree isqvlgklnk ldqkmqqpek vsvqidlnsl tseapsdesa
      661 sprmfrahkg ahgpklenta dwccsdasgs nseslrvqal kkslftrpss rslteensat
      721 eskiasisns prdwrtitys nrmgiseeei kergpgdskd whrkskeadr qydippqhrl
      781 pkqpkdgflv eqvfsphpyp aslkahmksn plytdmrlte laevkrgqps wtieeyarns
      841 gdkgkltald lqtqeslnpn nleywmediy tpgydsllkr keaefrrakv ckiaaliaaa
      901 actvilvivv pictmks
//
LOCUS       XP_061015605             419 aa            linear   MAM 02-DEC-2023
DEFINITION  fumarylacetoacetase [Dama dama].
ACCESSION   XP_061015605
VERSION     XP_061015605.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159622.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..419
                     /product="fumarylacetoacetase"
                     /calculated_mol_wt=45938
     Region          2..416
                     /region_name="fum_ac_acetase"
                     /note="fumarylacetoacetase; TIGR01266"
                     /db_xref="CDD:162276"
     CDS             1..419
                     /gene="FAH"
                     /coded_by="XM_061159622.1:54..1313"
                     /db_xref="GeneID:133068381"
ORIGIN      
        1 msfvpvaeds dfpihnlpyg vfstrgnprp rigvaigdqi ldlsvikhlf tgpilsghqd
       61 vfdkptlnsf mglgqaawke araflqnlls asqarlrddv elrqraftsq asatmylpaa
      121 igdytdfyss rhhatnvgvm frgkenalmp nwlhlpvgyh grassvvvsg tpirrplgqi
      181 rpddskppvy gacklldfel emaffvgpgn klgepipisk ahehifgmvl mndwsardiq
      241 kweyvplgpf lgksfgttis pwvvpmdalm pfalpnpdqd pkplpylchd qpytfdinls
      301 valkgegmsq aaticrsnfk ymywtmlqql thhsvngcnl qpgdllasgt isgpepesfg
      361 cmlelswrgt kavelgngqt rkflldgdev imtghcqgdg yrigfgqcag kvlpalspa
//
LOCUS       XP_061015606            1088 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane channel-like protein 3 [Dama dama].
ACCESSION   XP_061015606
VERSION     XP_061015606.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159623.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1088
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1088
                     /product="transmembrane channel-like protein 3"
                     /calculated_mol_wt=123702
     Region          497..612
                     /region_name="TMC"
                     /note="TMC domain; pfam07810"
                     /db_xref="CDD:462275"
     CDS             1..1088
                     /gene="TMC3"
                     /coded_by="XM_061159623.1:103..3369"
                     /db_xref="GeneID:133068383"
ORIGIN      
        1 mkppkasqhf rsirrnanqh yfyqesllls nledsftade tgdshdpeqi fqniqfqkdl
       61 manircrpwt mgqklralrr akdivlkfeg rltrtrgyqa agaelwrkfa rlacnfvvif
      121 ipwemrikri eshfgsgvas yfiflrwlfg inivlmimtg afivlpelia gqpfgstask
      181 tipkehiasa qdldtvwslg gylqysvlfy gyygrerrig ragyrlplay flvgmavfay
      241 sfiillkkma knsrtslasa ssenytfcwr vfcawdylig npeaaeskta aivnsireai
      301 leeqekkksk nlavticlrv vanilvlvsl agsiyliyfv vdrsqklaqs kkeltlwekn
      361 evsvvvslvt mlapsafdli aalemyhprt tlrfqlarvl vlylgnlysl iialldkvns
      421 msieeatpqn stshwidstf atraapgeer wstlgpgigl rrnstwalee aniptyispl
      481 sgankttvst rspqdqcwet yvgqemlkls iidmlftvas illidffrgl fvrylsdywc
      541 wdleskfpey gefkiaenvl hlvynqgmiw mgaffspclp afnvlkligl mylrswavlt
      601 cnaphqqvfr asrsnnfyla mllfmlflcm lptifaivry kpslncgpfs gqekmydivs
      661 etiekdfpaw fgsvigyiss pvvilpavll lfmliyylqs iarslklsnh qlrmqiqnar
      721 sedrkkvaqm veariqtqde ttkrfpkdsd lgsqlssahs atpqnngtvv nfdssssrss
      781 rvetvaqptt pspqpgpgsp ssplpgfsrs rhystrypcg pcmstsdlhr srsctpgmft
      841 khiedvhsep lfrkdlqpin hgsvvsalvp hsprshapry ylinerdsqq kkhstfwper
      901 hfkidtsrdt admyprnmrr ceplaspqls eeeeevprrq vsrqafhprs ltdlhgvhhf
      961 yvgessgsqa ltpelqrpth ytswndgfgg qldrpmymhk karsqnfqyp qhplkpraka
     1021 kfepsitesd fmsaassrdq qnsgtnqyfq vthsqpkwpr sagqfgrrka isrqeltagl
     1081 ndlicsnv
//
LOCUS       XP_061015607             752 aa            linear   MAM 02-DEC-2023
DEFINITION  amyloid-beta A4 precursor protein-binding family A member 2 [Dama
            dama].
ACCESSION   XP_061015607
VERSION     XP_061015607.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159624.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..752
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..752
                     /product="amyloid-beta A4 precursor protein-binding family
                     A member 2"
                     /calculated_mol_wt=82608
     Region          366..538
                     /region_name="PTB_X11"
                     /note="X11-like Phosphotyrosine-binding (PTB) domain;
                     cd01208"
                     /db_xref="CDD:269919"
     Site            order(378,468,508)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269919"
     Site            order(396,457,460..465,516,527,530)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269919"
     Region          570..655
                     /region_name="PDZ1_APBA1_3-like"
                     /note="PDZ domain 1 of amyloid-beta A4 precursor
                     protein-binding family A member 1 (APBA1), APBA2, APBA3,
                     and related domains; cd06720"
                     /db_xref="CDD:467203"
     Site            order(581..587,601,604,634,638,641..642)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467203"
     Region          659..736
                     /region_name="PDZ2_APBA1_3-like"
                     /note="PDZ domain 2 of amyloid-beta A4 precursor
                     protein-binding family A member 1 (APBA1), APBA2, APBA3,
                     and related domains; cd06793"
                     /db_xref="CDD:467255"
     Site            order(673..679,684,687,716,720,723..724)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467255"
     CDS             1..752
                     /gene="APBA2"
                     /coded_by="XM_061159624.1:280..2538"
                     /db_xref="GeneID:133068386"
ORIGIN      
        1 msptmahrkr qsvasslldh rarpgpepes edaelaleey vptdlelaal rpespvpaeq
       61 ggpdqspdgd sssdyvnnts eeedydeglp eeeegityyi rycpeddsyl qgtdcdgqgy
      121 lthdtrhlet decqeaveew teptgphahg hsdpgspgyr dshlsvpede asvldsrdqe
      181 egvhycpgee ayqdyypaea ngnagstspy rprrrdgdpe dqeedidqiv aeikmslsms
      241 sitsggeasp ehtprgpepg prdspeacpq aeasrgpsrh egrpkslnlp peakhptdpq
      301 rsfktktrtp eerpkwpqee vcngleqprk qqrsdlngpv dnnnipetkk vasfpsfvav
      361 pgpcepedli dgiifaanyl gstqllsern psknirmmqa qeavsrvkrm qkaakikkka
      421 nsegdaqtlt evdlfistqr ikvlnadtqe tmmdhalrti syiadigniv vlmarrrmpr
      481 sasqdciett pgaqegkkqy kmichvfese daqliaqsig qafsvayqef lranginped
      541 lsqkeysdii ntqemynddl ihfsnsenck elqlekhkge ilgvvvvesg wgsilptvil
      601 anmmnggpaa rsgklsigdq imsingtslv glplatcqgi ikglknqtqv klnivscppv
      661 ttvlikrpdl kyqlgfsvqn giicslmrgg iaerggvrvg hriieingqs vvatahekiv
      721 qalsnsvgei hmktmpaamf rlltgqetpl yi
//
LOCUS       XP_061015608             494 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger protein PLAGL2-like [Dama dama].
ACCESSION   XP_061015608
VERSION     XP_061015608.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159625.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..494
                     /product="zinc finger protein PLAGL2-like"
                     /calculated_mol_wt=54103
     Region          40..60
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(45,47,49,51..52,55..56,59,75,77,81..82,85..86,89,
                     103,105,107,109..110,113..114,117)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          68..90
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(68,73,86,90)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          83..105
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          96..118
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          98..118
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          127..147
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          156..176
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(161,163,165,167..168,171..172,175,196,198,202..203,
                     206..207,210,224,226,228,230..231,234..235)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          191..211
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(191,194,207,211)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          219..237
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..494
                     /gene="LOC133068387"
                     /coded_by="XM_061159625.1:187..1671"
                     /db_xref="GeneID:133068387"
ORIGIN      
        1 mttfftsvpp wiqdakqeee vgwklvprpr greaesqvkc eisgtpfsng eklrphslph
       61 peqrpyscpq lhcgkafask yklyrhmath saqkphqcmy cnkmfhrkdh lrnhlqthdp
      121 nkealhcsec gknyntklgy rrhlamhaas sgdlscklcl qtfestqall ehlkahsrrv
      181 aggakekkhp cdhcdrrfyt rkdvrrhlvv htgrkdflcq ycaqrfgrkd hltrhvkksh
      241 sqellkikte pvdmlgllsc ssavsvkeel spvlcvasrd vvgakafpgt lpmgmygahi
      301 pampsagvph slvhntlpmg msyplesspi sspaqlppky qlgstsylpd klpkvevdsf
      361 laelpgslsl ssaepqptsp qpaaaaalld ealltkspan lsealcaanv dfshllgflp
      421 lnlppcnppg atgglvmgys qaeaqplltt lqaqpqdspg aggplnfgpl hslppvftsg
      481 lstttlprfh qafq
//
LOCUS       XP_061015609             800 aa            linear   MAM 02-DEC-2023
DEFINITION  threonine--tRNA ligase 2, cytoplasmic [Dama dama].
ACCESSION   XP_061015609
VERSION     XP_061015609.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159626.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..800
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..800
                     /product="threonine--tRNA ligase 2, cytoplasmic"
                     /calculated_mol_wt=91581
     Region          118..793
                     /region_name="PLN02908"
                     /note="threonyl-tRNA synthetase"
                     /db_xref="CDD:178496"
     CDS             1..800
                     /gene="TARS3"
                     /coded_by="XM_061159626.1:1..2403"
                     /db_xref="GeneID:133068389"
ORIGIN      
        1 maaealaaea vasrlarqek dirwlwaevh rlrdeqlnap drcqaegpcl trevaqlrae
       61 nrelrhrlhr lrlcleeels hqarlegaer sgagrgaaga qpspsqspee dvrkeiepdn
      121 evkkppnfvk erlklfeilk kdhqlllavy ekkgdssdvi tvrvadgrtv kgeawkttpy
      181 qvaaeisqel aettvvakvn gelwdldrpl egdatvellt feneeaqavy whssahvlge
      241 alelhyggll ccsppgdggf hcdvyledra vsstelpvle smcqaiikeq qpferlevst
      301 evlldlfkyn kfkcrilkek vdtptttvyr cgplvelckg phirhtgnik vikifknsla
      361 ywednpemem lqrvygvsfp deqrmavwee lqekarardh rtigkeqelf ffhdlspgsc
      421 fflprgafiy ntlidfireq hhqrnftevl spnmyscklw easghwqhys enmftfdidk
      481 dtfalkpmnc pghclmfahr prswrempir ladfgvlhrn epsgalsglt rvrrfqqdda
      541 hifctvgqie eeikgclqfl qsvystfgfc fqlnlstrpe nflgeielwd eaekhlrnsl
      601 mefgkpwkin pgdgafygpk idieikdalg ryhqcatiql dfqlpirfnl tyvskdgddk
      661 knpviihqai lgsvermiai llenyggkwp fwlsprqvmv ipvgptceky alqissdffe
      721 egfmadvdld rgctlnnkir naqlaqynfi fvvgekeetn navnvrtrdn kihgeisvts
      781 aidklknlkq srtlnaeeef
//
LOCUS       XP_061015610             499 aa            linear   MAM 02-DEC-2023
DEFINITION  neuronal acetylcholine receptor subunit alpha-7 [Dama dama].
ACCESSION   XP_061015610
VERSION     XP_061015610.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159627.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..499
                     /product="neuronal acetylcholine receptor subunit alpha-7"
                     /calculated_mol_wt=55899
     Region          5..487
                     /region_name="LIC"
                     /note="Cation transporter family protein; TIGR00860"
                     /db_xref="CDD:273305"
     CDS             1..499
                     /gene="CHRNA7"
                     /coded_by="XM_061159627.1:2..1501"
                     /db_xref="GeneID:133068390"
ORIGIN      
        1 mrgslclala asilhvslqg efqrklykdl vknynplerp vandslpltv yfslsllqim
       61 dvdeknqvlt tniwlqmtwt dhylqwnase ypgvktvrfp dgqiwkpdil lynsaderfd
      121 atfhtnvlvn ssghcqylpp gifksscyid vrwfpfdvqq cklkfgswsy ggwsldlqmq
      181 eadisgyipn gewdlvgilg krsekfyecc kepypdvtft vtirrrtlyy glnllipcvl
      241 isalallvfl lpadsgekis lgitvllslt vfmllvaeim patsdsvpli aqyfastmii
      301 vglsvvvtvi vlqyhhhdpd ggkmpkwtrv illnwcawfl rmkrpgedkv rpacqhkqrr
      361 cslasvemsa vagppatngn llyigfrgld smhcaptpds gvvcgrvacs pthdehllhg
      421 gqpsegdpdl akileevryi ahrfrcqdes eavcsewkfa acvvdrlclm afsvftilct
      481 igilmsapnf veavskdfa
//
LOCUS       XP_061015612             110 aa            linear   MAM 02-DEC-2023
DEFINITION  small ribosomal subunit protein bS16m-like [Dama dama].
ACCESSION   XP_061015612
VERSION     XP_061015612.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159629.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..110
                     /product="small ribosomal subunit protein bS16m-like"
                     /calculated_mol_wt=12000
     Region          17..97
                     /region_name="rpsP"
                     /note="30S ribosomal protein S16; Provisional; cl42308"
                     /db_xref="CDD:478112"
     CDS             1..110
                     /gene="LOC133068391"
                     /coded_by="XM_061159629.1:1..333"
                     /db_xref="GeneID:133068391"
ORIGIN      
        1 mvqltpvlyk ayhgghltic lalggctkwp fhhivaspnk cpmdghfmeq lgsydplsss
       61 ygkklislnl dqiwhcigcg ahlskpvekl lglsgyfpqh ltvvtnaerl
//
LOCUS       XP_061015613             939 aa            linear   MAM 02-DEC-2023
DEFINITION  OTU domain-containing protein 7A [Dama dama].
ACCESSION   XP_061015613
VERSION     XP_061015613.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159630.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..939
                     /product="OTU domain-containing protein 7A"
                     /calculated_mol_wt=101568
     Region          26..68
                     /region_name="UBA_Cezanne_like"
                     /note="UBA-like domain found in OTU domain-containing
                     proteins OTU7A, OTU7B and similar proteins; cd14347"
                     /db_xref="CDD:270532"
     Region          175..381
                     /region_name="OTU_OTUD7A"
                     /note="OTU (ovarian tumor) domain of OTU domain-containing
                     protein 7A; cd22773"
                     /db_xref="CDD:438610"
     Site            order(210..211,255,274,281,309..312,334,337,342..344,348,
                     374,376)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438610"
     Region          901..924
                     /region_name="zf-A20"
                     /note="A20-like zinc finger; pfam01754"
                     /db_xref="CDD:460313"
     CDS             1..939
                     /gene="OTUD7A"
                     /coded_by="XM_061159630.1:368..3187"
                     /db_xref="GeneID:133068392"
ORIGIN      
        1 mvssllpnpt saecwaallh dpmtldmdav lsdfvrstga epglardlle gknwdltaal
       61 sdyeqlrqvh tanlppvfne grcpkqpere ppppghtaer pclprqddia qekrlsrgis
      121 hassaivsla rshvasecss eqfplempiy tfqlpdlsvy sedfrsfver dlieqatmva
      181 leqagrlnww stvctsckrl lplattgdgn cllhaaslgm wgfhdrdlvl rkalytmmrt
      241 gaerealkrr wrwqqtqqnk esglvyteee werewtellk lasseprthf sknggsgggm
      301 dnaedpvyes leefhvfvla hilrrpivvv adtmlrdsgg eafapipfgg iylplevppn
      361 rchcsplvla ydqahfsalv smeqrdqqre qavipltdse hkllplhfav dpgkdwewgk
      421 ddndnarlah lilsleakln llhsymnvtw iripsetrap laqpesptas agedvqslad
      481 sldsdrdsvc snsnsnngkn gkekekekqr kdkdktrads vanklgsfsk tlgiklkknm
      541 gglgglvhgk msransangk hgdapergke kkakarkgsk eesgpsasts psekttpspt
      601 dkaagaspad kgggprgdaw kystdvklsl nilraamqge rkfifaglll tshrhqfhee
      661 migyyltsaq erfsaeqeqr rrdaaaaaaa aaaaastakr pqrrpeaega pgperaspgp
      721 pagqptqlvl klkerpspgp gtgsraaraa aggsaspvpg gsarrsgasg pvpgrsppap
      781 grqsvihvqa agardepcvp avgalrpcat ypqqnrslss qsysparaaa lrtvntvesl
      841 aravpgalpg aagaaepksq tytngfgaar dglefadada paarsngegg rggpgagpaq
      901 rrcqrencaf ygraetehyc sycyreelrr rrearavrp
//
LOCUS       XP_061015614             223 aa            linear   MAM 02-DEC-2023
DEFINITION  adenylate kinase 4, mitochondrial-like [Dama dama].
ACCESSION   XP_061015614
VERSION     XP_061015614.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159631.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..223
                     /product="adenylate kinase 4, mitochondrial-like"
                     /calculated_mol_wt=25164
     Region          10..188
                     /region_name="ADK"
                     /note="Adenylate kinase; pfam00406"
                     /db_xref="CDD:395329"
     CDS             1..223
                     /gene="LOC133068393"
                     /coded_by="XM_061159631.1:108..779"
                     /db_xref="GeneID:133068393"
ORIGIN      
        1 maskllravi lgppgsgkgt vcqriaqnfg lqhlssghfl renikadtev gdmakqyiek
       61 gllvpdhvit rlmlselenr rgehwlldgf prtlvqaeal dricdldlvi tlnipfetlk
      121 drlsrrwihp psgrvynldf npphvhgidd vtgeplvqqe ddkpeavaar lrqykdvaks
      181 vielyksrgv lhqfsgtetn kiwpyvytlf snkitpvqsk eay
//
LOCUS       XP_061015615             169 aa            linear   MAM 02-DEC-2023
DEFINITION  cellular retinoic acid-binding protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061015615
VERSION     XP_061015615.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159632.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..169
                     /product="cellular retinoic acid-binding protein 1 isoform
                     X1"
                     /calculated_mol_wt=19324
     Region          2..121
                     /region_name="lipocalin_FABP"
                     /note="lipocalin/cytosolic fatty acid-binding protein
                     family; cl10502"
                     /db_xref="CDD:471979"
     Site            order(4,8,42,44,51,53,55,62,64,66,96,98,108,110,112,119,
                     121)
                     /site_type="other"
                     /note="ligand binding cavity [chemical binding]"
                     /db_xref="CDD:381182"
     CDS             1..169
                     /gene="CRABP1"
                     /coded_by="XM_061159632.1:324..833"
                     /db_xref="GeneID:133068394"
ORIGIN      
        1 mpnfagtwkm rssenfdell kalgvnamlr kvavaaaskp hveirqdgdq fyiktsttvr
       61 tteinfkvge gfeeetvdgr kcrslptwen enkihctqtl legdgpktyw trelandeli
      121 lerfqkfqya csgslftlpp rprpppwtyr lqrlsgrqtr naklrqseg
//
LOCUS       XP_061015616             169 aa            linear   MAM 02-DEC-2023
DEFINITION  cellular retinoic acid-binding protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061015616
VERSION     XP_061015616.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159633.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..169
                     /product="cellular retinoic acid-binding protein 1 isoform
                     X1"
                     /calculated_mol_wt=19324
     Region          2..121
                     /region_name="lipocalin_FABP"
                     /note="lipocalin/cytosolic fatty acid-binding protein
                     family; cl10502"
                     /db_xref="CDD:471979"
     Site            order(4,8,42,44,51,53,55,62,64,66,96,98,108,110,112,119,
                     121)
                     /site_type="other"
                     /note="ligand binding cavity [chemical binding]"
                     /db_xref="CDD:381182"
     CDS             1..169
                     /gene="CRABP1"
                     /coded_by="XM_061159633.1:250..759"
                     /db_xref="GeneID:133068394"
ORIGIN      
        1 mpnfagtwkm rssenfdell kalgvnamlr kvavaaaskp hveirqdgdq fyiktsttvr
       61 tteinfkvge gfeeetvdgr kcrslptwen enkihctqtl legdgpktyw trelandeli
      121 lerfqkfqya csgslftlpp rprpppwtyr lqrlsgrqtr naklrqseg
//
LOCUS       XP_061015617             137 aa            linear   MAM 02-DEC-2023
DEFINITION  cellular retinoic acid-binding protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061015617
VERSION     XP_061015617.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159634.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..137
                     /product="cellular retinoic acid-binding protein 1 isoform
                     X2"
                     /calculated_mol_wt=15460
     Region          2..137
                     /region_name="CRABP1"
                     /note="cellular retinoic acid-binding protein 1; cd19460"
                     /db_xref="CDD:381235"
     Site            order(4,16,19..20,23,25,29..30,32..33,40,42,44,51,53,55,
                     57,59..60,62,64,66,74,76..79,94,96,110,112,119,121,123,
                     132,134)
                     /site_type="other"
                     /note="ligand binding cavity [chemical binding]"
                     /db_xref="CDD:381235"
     Site            order(16,25,29,32,40,55,57,59..60,77..79,121,132,134)
                     /site_type="other"
                     /note="retinoid binding site [chemical binding]"
                     /db_xref="CDD:381235"
     CDS             1..137
                     /gene="CRABP1"
                     /coded_by="XM_061159634.1:305..718"
                     /db_xref="GeneID:133068394"
ORIGIN      
        1 mpnfagtwkm rssenfdell kalgvnamlr kvavaaaskp hveirqdgdq fyiktsttvr
       61 tteinfkvge gfeeetvdgr kcrslptwen enkihctqtl legdgpktyw trelandeli
      121 ltfgaddvvc triyvre
//
LOCUS       XP_061015618             496 aa            linear   MAM 02-DEC-2023
DEFINITION  neuronal acetylcholine receptor subunit beta-4 [Dama dama].
ACCESSION   XP_061015618
VERSION     XP_061015618.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159635.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..496
                     /product="neuronal acetylcholine receptor subunit beta-4"
                     /calculated_mol_wt=55719
     Region          7..484
                     /region_name="LIC"
                     /note="Cation transporter family protein; cl42365"
                     /db_xref="CDD:455710"
     Region          54..231
                     /region_name="LGIC_ECD"
                     /note="extracellular domain (ECD) of Cys-loop
                     neurotransmitter-gated ion channels (also known as
                     ligand-gated ion channel (LGIC)); cl28912"
                     /db_xref="CDD:475126"
     Site            order(64,66,72..73,80,102,104,113..114,116,118..119,
                     130..132,134,144,146,148,152,174,231)
                     /site_type="other"
                     /note="pentamer interface [polypeptide binding]"
                     /db_xref="CDD:349828"
     CDS             1..496
                     /gene="CHRNB4"
                     /coded_by="XM_061159635.1:110..1600"
                     /db_xref="GeneID:133068395"
ORIGIN      
        1 mrsalplllf slvalcgrgd crvanaeekl mddllnktry nnlirpatss sqlisiqlql
       61 slaqlisvne reqimttniw lkqewtdyrl awnssryegv nilripanrv wlpdivlynn
      121 adgtyevsly tnvvvrsngs vlwlppaick sackievkhf pfdqqnctlk frswtydhte
      181 idmvlktpsa smddftpsge wdivalpgrr tvnpqdpsyv dvtydfiikr kplfytinli
      241 ipcvlitsla ilvfylpsdc gekmtlcisv llaltvflll iskivpptsl nvpligkylm
      301 ftmvlvtfsi vtsvcvlnvh hrspsthtma pwvkrcflhk lptflfmkrp dsspsrvpqs
      361 sqarltksea tttttlamgp tsssnlygns myfvnpglaa pkspvasdsa giprdfrlrs
      421 sgrfrqdvqe alegvsfiaq hmksddldqs viedwkyvam vvdrlflwvf vvvcvlgtvg
      481 lflpplfqth tpseep
//
LOCUS       XP_061015619             359 aa            linear   MAM 02-DEC-2023
DEFINITION  insulin gene enhancer protein ISL-2 [Dama dama].
ACCESSION   XP_061015619
VERSION     XP_061015619.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159636.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..359
                     /product="insulin gene enhancer protein ISL-2"
                     /calculated_mol_wt=39710
     Region          27..81
                     /region_name="LIM1_Isl"
                     /note="The first LIM domain of Isl, a member of LHX
                     protein family; cd09366"
                     /db_xref="CDD:188752"
     Site            order(27,30,49,52,55,58,77,80)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188752"
     Region          89..143
                     /region_name="LIM2_Isl2"
                     /note="The second LIM domain of Isl2; cd09471"
                     /db_xref="CDD:188855"
     Site            order(89,92,111,114,117,120,139,142)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188855"
     Region          191..247
                     /region_name="HOX"
                     /note="Homeodomain; smart00389"
                     /db_xref="CDD:197696"
     Site            order(193..196,198,215,221,234,236..237,240..241,243..245,
                     247..248)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     Site            order(194,197,237,240..241,244)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     CDS             1..359
                     /gene="ISL2"
                     /coded_by="XM_061159636.1:133..1212"
                     /db_xref="GeneID:133068399"
ORIGIN      
        1 mvdiifhypf lgtmgdhskk kpgtamcvgc gsqihdqfil rvspdlewha aclkcaecsq
       61 yldetctcfv rdgktyckrd yvrlfgikca kcqvgfsssd lvmrardsvy hiecfrcsvc
      121 srqllpgdef slrehellcr adhglllera aagsprspgp lpgarglhlp dpgsgrqpsl
      181 rphvhkqtek ttrvrtvlne kqlhtlrtcy aanprpdalm keqlvemtgl sprvirvwfq
      241 nkrckdkkks ilmkqlqqqq hndktslqgl tgtplvagsp irhesavqgs avevqtyqpp
      301 wkalsefalq sdldqpafqq lvsfsesgsl gnssgsdvts lssqlpdtpn smvpspvet
//
LOCUS       XP_061015620             620 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat and immunoglobulin-like domain-containing nogo
            receptor-interacting protein 1 isoform X1 [Dama dama].
ACCESSION   XP_061015620
VERSION     XP_061015620.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159637.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..620
                     /product="leucine-rich repeat and immunoglobulin-like
                     domain-containing nogo receptor-interacting protein 1
                     isoform X1"
                     /calculated_mol_wt=69690
     Region          41..75
                     /region_name="LRRNT"
                     /note="Leucine rich repeat N-terminal domain; smart00013"
                     /db_xref="CDD:214470"
     Region          71..>371
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          73..96
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          97..120
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          121..144
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          145..192
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          193..216
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          217..264
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          265..288
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          289..312
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          313..336
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          337..357
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          341..>421
                     /region_name="PCC"
                     /note="polycystin cation channel protein; TIGR00864"
                     /db_xref="CDD:188093"
     Region          423..514
                     /region_name="IgI_Lingo-1"
                     /note="Immunoglobulin I-set domain of the Leucine-rich
                     repeat and immunoglobin-like domain-containing protein 1
                     (Lingo-1); cd20969"
                     /db_xref="CDD:409561"
     Region          423..426
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409561"
     Region          431..435
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409561"
     Region          441..450
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409561"
     Region          455..460
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409561"
     Region          463..465
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409561"
     Region          474..477
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409561"
     Region          480..487
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409561"
     Region          493..501
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409561"
     Region          504..514
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409561"
     CDS             1..620
                     /gene="LINGO1"
                     /coded_by="XM_061159637.1:82..1944"
                     /db_xref="GeneID:133068400"
ORIGIN      
        1 mqvsermlag garsmpspll acwqpilllv lgsvlsgsat gcpprcecsa qdravlchrk
       61 rfvavpegip tetrlldlgk nriktlnqde fasfphleel elnenivsav epgafnnlfn
      121 lrtlglrsnr lkliplgvft glsnltkldi senkivilld ymfqdlynlk slevgdndlv
      181 yishrafsgl nsleqltlek cnltsiptea lshlhglivl rlrhlninai rdysfkrlyr
      241 lkvleishwp yldtmtpncl yglnltslsi thcnltavpy lavrhlvylr flnlsynpis
      301 tiegsmlhel lrlqeiqlvg gqlavvepya frglnylrvl nvsgnqlttl eesafhsvgn
      361 letlildsnp lacdcrllwv frrrwrlnfn rqqptcatpe fvqgkefkdf pdvllpnyft
      421 crrarirdrk aqqvfvdegh tvqfvcradg dpppailwls prkhlvsaks ngrltvfpdg
      481 tlevryaqvq dngtylciaa naggndsmpa hlhvrsyspd wphqpnktfa fisnqpgege
      541 anstratvpf pfdiktliia ttmgfisflg vvlfclvllf lwsrgkgntk hnieieyvpr
      601 ksdagissad aprkfnmkmi
//
LOCUS       XP_061015621             614 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat and immunoglobulin-like domain-containing nogo
            receptor-interacting protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061015621
VERSION     XP_061015621.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159638.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..614
                     /product="leucine-rich repeat and immunoglobulin-like
                     domain-containing nogo receptor-interacting protein 1
                     isoform X2"
                     /calculated_mol_wt=68959
     Region          35..69
                     /region_name="LRRNT"
                     /note="Leucine rich repeat N-terminal domain; smart00013"
                     /db_xref="CDD:214470"
     Region          65..>365
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          67..90
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          91..114
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          115..138
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          139..186
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          187..210
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          211..258
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          259..282
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          283..306
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          307..330
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          331..351
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          335..>415
                     /region_name="PCC"
                     /note="polycystin cation channel protein; TIGR00864"
                     /db_xref="CDD:188093"
     Region          417..508
                     /region_name="IgI_Lingo-1"
                     /note="Immunoglobulin I-set domain of the Leucine-rich
                     repeat and immunoglobin-like domain-containing protein 1
                     (Lingo-1); cd20969"
                     /db_xref="CDD:409561"
     Region          417..420
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409561"
     Region          425..429
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409561"
     Region          435..444
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409561"
     Region          449..454
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409561"
     Region          457..459
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409561"
     Region          468..471
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409561"
     Region          474..481
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409561"
     Region          487..495
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409561"
     Region          498..508
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409561"
     CDS             1..614
                     /gene="LINGO1"
                     /coded_by="XM_061159638.1:399..2243"
                     /db_xref="GeneID:133068400"
ORIGIN      
        1 mlaggarsmp spllacwqpi lllvlgsvls gsatgcpprc ecsaqdravl chrkrfvavp
       61 egiptetrll dlgknriktl nqdefasfph leelelneni vsavepgafn nlfnlrtlgl
      121 rsnrlklipl gvftglsnlt kldisenkiv illdymfqdl ynlkslevgd ndlvyishra
      181 fsglnsleql tlekcnltsi ptealshlhg livlrlrhln inairdysfk rlyrlkvlei
      241 shwpyldtmt pnclyglnlt slsithcnlt avpylavrhl vylrflnlsy npistiegsm
      301 lhellrlqei qlvggqlavv epyafrglny lrvlnvsgnq lttleesafh svgnletlil
      361 dsnplacdcr llwvfrrrwr lnfnrqqptc atpefvqgke fkdfpdvllp nyftcrrari
      421 rdrkaqqvfv deghtvqfvc radgdpppai lwlsprkhlv saksngrltv fpdgtlevry
      481 aqvqdngtyl ciaanaggnd smpahlhvrs yspdwphqpn ktfafisnqp gegeanstra
      541 tvpfpfdikt liiattmgfi sflgvvlfcl vllflwsrgk gntkhnieie yvprksdagi
      601 ssadaprkfn mkmi
//
LOCUS       XP_061015622             614 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat and immunoglobulin-like domain-containing nogo
            receptor-interacting protein 1 isoform X2 [Dama dama].
ACCESSION   XP_061015622
VERSION     XP_061015622.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159639.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..614
                     /product="leucine-rich repeat and immunoglobulin-like
                     domain-containing nogo receptor-interacting protein 1
                     isoform X2"
                     /calculated_mol_wt=68959
     Region          35..69
                     /region_name="LRRNT"
                     /note="Leucine rich repeat N-terminal domain; smart00013"
                     /db_xref="CDD:214470"
     Region          65..>365
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          67..90
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          91..114
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          115..138
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          139..186
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          187..210
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          211..258
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          259..282
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          283..306
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          307..330
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          331..351
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          335..>415
                     /region_name="PCC"
                     /note="polycystin cation channel protein; TIGR00864"
                     /db_xref="CDD:188093"
     Region          417..508
                     /region_name="IgI_Lingo-1"
                     /note="Immunoglobulin I-set domain of the Leucine-rich
                     repeat and immunoglobin-like domain-containing protein 1
                     (Lingo-1); cd20969"
                     /db_xref="CDD:409561"
     Region          417..420
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409561"
     Region          425..429
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409561"
     Region          435..444
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409561"
     Region          449..454
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409561"
     Region          457..459
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409561"
     Region          468..471
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409561"
     Region          474..481
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409561"
     Region          487..495
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409561"
     Region          498..508
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409561"
     CDS             1..614
                     /gene="LINGO1"
                     /coded_by="XM_061159639.1:173..2017"
                     /db_xref="GeneID:133068400"
ORIGIN      
        1 mlaggarsmp spllacwqpi lllvlgsvls gsatgcpprc ecsaqdravl chrkrfvavp
       61 egiptetrll dlgknriktl nqdefasfph leelelneni vsavepgafn nlfnlrtlgl
      121 rsnrlklipl gvftglsnlt kldisenkiv illdymfqdl ynlkslevgd ndlvyishra
      181 fsglnsleql tlekcnltsi ptealshlhg livlrlrhln inairdysfk rlyrlkvlei
      241 shwpyldtmt pnclyglnlt slsithcnlt avpylavrhl vylrflnlsy npistiegsm
      301 lhellrlqei qlvggqlavv epyafrglny lrvlnvsgnq lttleesafh svgnletlil
      361 dsnplacdcr llwvfrrrwr lnfnrqqptc atpefvqgke fkdfpdvllp nyftcrrari
      421 rdrkaqqvfv deghtvqfvc radgdpppai lwlsprkhlv saksngrltv fpdgtlevry
      481 aqvqdngtyl ciaanaggnd smpahlhvrs yspdwphqpn ktfafisnqp gegeanstra
      541 tvpfpfdikt liiattmgfi sflgvvlfcl vllflwsrgk gntkhnieie yvprksdagi
      601 ssadaprkfn mkmi
//
LOCUS       XP_061015623             274 aa            linear   MAM 02-DEC-2023
DEFINITION  protein CIMAP1C [Dama dama].
ACCESSION   XP_061015623
VERSION     XP_061015623.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159640.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..274
                     /product="protein CIMAP1C"
                     /calculated_mol_wt=30498
     CDS             1..274
                     /gene="CIMAP1C"
                     /coded_by="XM_061159640.1:1..825"
                     /db_xref="GeneID:133068401"
ORIGIN      
        1 mklskgvknp vfygqqpekk vpvssgheik qipvvlamlk gpgpakylrp sctgyidhdv
       61 smfqepaytl haqhsekrim dirspgpcyf ldpkitrfgm ascpqvpmae hisnlrlspt
      121 papchyhlek thppgerrap eysfgfrcpy rvmdpnpgpn qyqmplllgp nlpankaapc
      181 yslahldknw fyknmatgpg paaytrpeps vyqnrgpvys makrfgylad htprpgpgsh
      241 nvqqvmvhkp rppaftmgik hsahlcpliv dvrd
//
LOCUS       XP_061015624             184 aa            linear   MAM 02-DEC-2023
DEFINITION  U3 small nucleolar ribonucleoprotein protein IMP3 [Dama dama].
ACCESSION   XP_061015624
VERSION     XP_061015624.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159641.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..184
                     /product="U3 small nucleolar ribonucleoprotein protein
                     IMP3"
                     /calculated_mol_wt=21690
     Region          30..167
                     /region_name="uS4_arch"
                     /note="ribosomal protein uS4, eukaryotic/archaeal type;
                     TIGR01018"
                     /db_xref="CDD:273397"
     CDS             1..184
                     /gene="IMP3"
                     /coded_by="XM_061159641.1:80..634"
                     /db_xref="GeneID:133068402"
ORIGIN      
        1 mvrklkfheq kllkqvdfln wevtdhnlhe lrvlrryrlq rredytrynq lsravrelar
       61 rlrdlperdp frvrssaall dklyalglvp trgslelcdf vtassfcrrr lptvllklrm
      121 aqhlqaavaf veqghvrvgp dvvtdpaflv trsmedfvtw vdsskikrhv leyneerddf
      181 dlda
//
LOCUS       XP_061015625             158 aa            linear   MAM 02-DEC-2023
DEFINITION  complexin-3 [Dama dama].
ACCESSION   XP_061015625
VERSION     XP_061015625.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159642.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..158
                     /product="complexin-3"
                     /calculated_mol_wt=17485
     Region          1..139
                     /region_name="Synaphin"
                     /note="Synaphin protein; pfam05835"
                     /db_xref="CDD:461755"
     CDS             1..158
                     /gene="CPLX3"
                     /coded_by="XM_061159642.1:1..477"
                     /db_xref="GeneID:133068404"
ORIGIN      
        1 mafmvktmvg gqlknltgsl gggedkgdgd ksaaeaqgms reeyeeyqkq lveekmerda
       61 qftqrkaera tlrshfrdky rlpknetdes qiqmaggdve lprelakmie edteeeeera
      121 svlgqlaslp gldlgslkdk aqstlgdlkq saekchim
//
LOCUS       XP_061015626             578 aa            linear   MAM 02-DEC-2023
DEFINITION  cytochrome P450 1A2 [Dama dama].
ACCESSION   XP_061015626
VERSION     XP_061015626.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159643.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..578
                     /product="cytochrome P450 1A2"
                     /calculated_mol_wt=65142
     Region          134..568
                     /region_name="CYP1A"
                     /note="cytochrome P450 family 1, subfamily A; cd20676"
                     /db_xref="CDD:410769"
     Site            order(170,186,195,199,376,379..380,383..384,443..444,
                     447..448,450,473,512..513,518,520..522,526)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410769"
     Site            order(179..180,184,186..187,285..289,315,318..319,322,
                     374..375,378..379,381..383,444,447..448,559..560,562)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410769"
     CDS             1..578
                     /gene="LOC133068405"
                     /coded_by="XM_061159643.1:194..1930"
                     /db_xref="GeneID:133068405"
ORIGIN      
        1 mgtmgkwsgl aqrlslpapc pacvrrkhsl ltldperswi flprdiaptp artapgpwew
       61 vqmalsqpsp fsameillas avfclvfwvv rawrprvpqg lksppepwgw pllghvltlg
      121 knphlvlsql sqrygdvlqi rigctpvlvl sgldtirqal vrqgddfkgr pdlysftlis
      181 dgqsmtfnpd sgpvwaarrr laqnalntfs vasdpsssss cyledhvske aeallgkfqe
      241 lmagpghfdp yghvvasvas vigamcfgqh fpqsseemls lvesshefve sassgnpvdf
      301 fpilrylpnp alqrfksfnq rflhflrkmv qehyqdfdkn svqdiigalf khsednsqas
      361 srlisqektv nlvndlfgag fdtittaisw slmylvtnpk iqrkiqeeld rvigrarrpr
      421 lsdrpqlpyl eafiletfrh ssfvpftiph sttrdttlng ffipkercvf inqwqvnhdp
      481 klwgdpsefr perfltsdgt aidkissekv llfglgkrrc igevmarwev flflaillqr
      541 lefsvppgvk vdltptyglt mkharckhvq arlrfpik
//
LOCUS       XP_061015627             516 aa            linear   MAM 02-DEC-2023
DEFINITION  cytochrome P450 1A1 [Dama dama].
ACCESSION   XP_061015627
VERSION     XP_061015627.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159644.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..516
                     /product="cytochrome P450 1A1"
                     /calculated_mol_wt=58455
     Region          74..509
                     /region_name="CYP1A"
                     /note="cytochrome P450 family 1, subfamily A; cd20676"
                     /db_xref="CDD:410769"
     Site            order(110,126,135,139,318,321..322,325..326,385..386,
                     389..390,392,415,453..454,459,461..463,467)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410769"
     Site            order(119..120,124,126..127,225..229,255,258..259,262,
                     316..317,320..321,323..325,386,389..390,500..501,503)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410769"
     CDS             1..516
                     /gene="LOC133068406"
                     /coded_by="XM_061159644.1:3..1553"
                     /db_xref="GeneID:133068406"
ORIGIN      
        1 mfsvfglpip isatelllas avfclvfwvv rawrprvpqg lksppepwgw pllghvltlg
       61 knphlvlsql sqrygdvlqi rigctpvlvl sgldtirqal vrqgddfkgr pdlysftlis
      121 dgqsmtfnpd sgpvwaarrr laqnalksfs iasdpsssss cyleehvske aeallgkfqe
      181 lmagpgcfdp fkyvvvsvan vicaicfgrr ydhddkefls lidlnnefge itasgnpadf
      241 ipvlrylpnt aldlfkdlnr rfhvfvqkiv tehyktfekg hirditdsli ehcqdkrlde
      301 naniqlsdek iinvvidlfg agfdtvttai swsllylvts prvqkkiqee ldtvigrarr
      361 prlsdrpqlp yleafiletf rhssfipfti phsttrdtsl ngfyipkgrc vfvnqwqinh
      421 dqklwedpse frperfltad gtinkvlsek viifglgkrk cigetiarle vflflaillh
      481 qvefrvtpgv kvdmtplygl tmkyarcehf qvhvrp
//
LOCUS       XP_061015628             750 aa            linear   MAM 02-DEC-2023
DEFINITION  immunoglobulin superfamily containing leucine-rich repeat protein 2
            [Dama dama].
ACCESSION   XP_061015628
VERSION     XP_061015628.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159645.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..750
                     /product="immunoglobulin superfamily containing
                     leucine-rich repeat protein 2"
                     /calculated_mol_wt=79148
     Region          36..52
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <51..>183
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          53..76
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          77..100
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          101..124
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          125..148
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          149..172
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          154..>229
                     /region_name="PCC"
                     /note="polycystin cation channel protein; TIGR00864"
                     /db_xref="CDD:188093"
     Region          <331..372
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          338..342
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          352..357
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          365..368
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..750
                     /gene="ISLR2"
                     /coded_by="XM_061159645.1:115..2367"
                     /db_xref="GeneID:133068409"
ORIGIN      
        1 mvplrtlcla wallgaaaac pepcacvdky ahqfadcayk elrevpeglp anvttlslsa
       61 nkitvlrrga fadvtqvtsl wlahnevrtv epgslavlsq lknldlshnl issfpwsdlr
      121 nlsalqllkm nhnrlgslpr dalgalpdlr slrinnnrlr tlapgtfdal salshlqlyh
      181 npfhcscslv wlqawaastr vslpepdsia casppalqgv pvhrlpalsc vppgvrlsve
      241 pppeapgspl psgltlmvhc vaeghptprl qwqlqipggt vvlaplvlsg edggdgaegg
      301 eeegdgdgpt qteaptptpa hawpappatp rflaltngsl lvpflsakea gvytcrahne
      361 lganstsvrv avaapgppkh apgaggdpdg qaptserkst aktrgnsvlt skpegkikgq
      421 glgrvsvlgd semgpeqeea eeeagegeea edqvpadpme eqrcghgdps ryvsnhafnq
      481 saelkphvfe lgvialdvae rearvqltpl aarwgpgpgg atgggrpgrr plrllylcpa
      541 gggaavqwsr veegvnaywf rglrpgtnys vclalageac hvqvvfatkk elpsllviva
      601 vsvfllvlat vpllgaacch llakhpgkpy rlilrpqapd pmekriaadf dprasylese
      661 ksyppggeag geepeeapge gldedveqgd ptgdlqrees laacslvesq skanqeefea
      721 gseysdrlpl gaeavdiaqe ingnyrqtag
//
LOCUS       XP_061015629             252 aa            linear   MAM 02-DEC-2023
DEFINITION  mast cell protease 3-like [Dama dama].
ACCESSION   XP_061015629
VERSION     XP_061015629.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159646.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..252
                     /product="mast cell protease 3-like"
                     /calculated_mol_wt=27762
     Region          21..242
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            21
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(64,108,202)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(196,217,219)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..252
                     /gene="LOC133068410"
                     /coded_by="XM_061159646.1:49..807"
                     /db_xref="GeneID:133068410"
ORIGIN      
        1 mvlflllval llsptgeagk iiggheakph srpymaflrf kisgkphmcg gflvredfvl
       61 taahclgssi dvtlgahnir eqertqqvip vrrafphphy ndktfvndim llqltrkadm
      121 tdavspislp rsfekpkpgm mcsvagwgrl dvdippadkl qevdlevqkd ekciarfkdy
      181 ipimqicagd pnkrkssfsg dsggplvcdg vaqgivsygd vygtppnvyt rvssfltwiq
      241 ktmrqykqqg sa
//
LOCUS       XP_061015630             252 aa            linear   MAM 02-DEC-2023
DEFINITION  mast cell protease 1A-like [Dama dama].
ACCESSION   XP_061015630
VERSION     XP_061015630.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159647.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..252
                     /product="mast cell protease 1A-like"
                     /calculated_mol_wt=28053
     Region          21..242
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            21
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(64,108,202)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(196,217,219)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..252
                     /gene="LOC133068411"
                     /coded_by="XM_061159647.1:1..759"
                     /db_xref="GeneID:133068411"
ORIGIN      
        1 mvlflllavl llfptgeagk iiggheakph shpymafvey qvsediffcg gflvcedfvl
       61 taahclgssi nvtlgahnir eqertqqvip vrramlhpwy ndktwandim llqlawkadm
      121 tdaaspinlp rrwqkvkpgk mcsvagwgql evdmpsadkl qevdlevqse ekciarfrny
      181 npitqicagd pnkrknffsg dsggplvcdg vaqgivsygr ddgttpdvyt rissflpwiq
      241 ttmrqykrqg sa
//
LOCUS       XP_061015631              91 aa            linear   MAM 02-DEC-2023
DEFINITION  non-histone chromosomal protein HMG-14-like [Dama dama].
ACCESSION   XP_061015631
VERSION     XP_061015631.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159648.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..91
                     /product="non-histone chromosomal protein HMG-14-like"
                     /calculated_mol_wt=9619
     Region          2..90
                     /region_name="HMG14_17"
                     /note="HMG14 and HMG17; pfam01101"
                     /db_xref="CDD:460064"
     CDS             1..91
                     /gene="LOC133068412"
                     /coded_by="XM_061159648.1:90..365"
                     /db_xref="GeneID:133068412"
ORIGIN      
        1 mpkrkvssae gaakeepkrr larlsakpap akvetkpkka agkdkssdkk vqtngkrgak
       61 gkqaevanqe tkedlpaeng etkneespps l
//
LOCUS       XP_061015632             166 aa            linear   MAM 02-DEC-2023
DEFINITION  cathepsin G-like [Dama dama].
ACCESSION   XP_061015632
VERSION     XP_061015632.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159649.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..166
                     /product="cathepsin G-like"
                     /calculated_mol_wt=18326
     Region          21..156
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            21
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(64,108,116)
                     /site_type="active"
                     /db_xref="CDD:238113"
     CDS             1..166
                     /gene="LOC133068415"
                     /coded_by="XM_061159649.1:1..501"
                     /db_xref="GeneID:133068415"
ORIGIN      
        1 mrpllllvaf scspglgqvs iirgrearph srpymafili rtpiglkvcg vflvredfvm
       61 taahclgsqm nvilgahnvr tlegtqqrip vlrpiphpgy spqshrndil llqgdvggpg
      121 vcnnvaqgiv sygdrmgtpp avftrissfl pwirrtmrcf kewrpe
//
LOCUS       XP_061015633             251 aa            linear   MAM 02-DEC-2023
DEFINITION  mast cell protease 1A-like isoform X1 [Dama dama].
ACCESSION   XP_061015633
VERSION     XP_061015633.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159650.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..251
                     /product="mast cell protease 1A-like isoform X1"
                     /calculated_mol_wt=27727
     Region          21..241
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            21
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(63,107,201)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(195,216,218)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..251
                     /gene="LOC133068417"
                     /coded_by="XM_061159650.1:59..814"
                     /db_xref="GeneID:133068417"
ORIGIN      
        1 mvlllllaal llspteeagk iiggheakph srpymaylqi htaenmfcgg flvredfvlt
       61 aahclgssis vtlgahnikk qertqqiitv rraiphpryn dktwtndiml lqlkrkakvt
      121 tavspislpr dwdtvnpgml csvagwgrld vdmshpnklq evqlevqrae kctsrykyyr
      181 tttqicagdp gkrkssfkgd sggplvcngv aqgivsygtk dgsppqvftr issflpwiqt
      241 tmkqyelqgp d
//
LOCUS       XP_061015634             223 aa            linear   MAM 02-DEC-2023
DEFINITION  mast cell protease 3-like isoform X2 [Dama dama].
ACCESSION   XP_061015634
VERSION     XP_061015634.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159651.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..223
                     /product="mast cell protease 3-like isoform X2"
                     /calculated_mol_wt=25084
     Region          21..213
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            21
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     CDS             1..223
                     /gene="LOC133068417"
                     /coded_by="XM_061159651.1:59..730"
                     /db_xref="GeneID:133068417"
ORIGIN      
        1 mvlllllaal llspteeagk iiggheakph srpymaylqi htaenmfcgg flvredfvlt
       61 aahclgssis vtlgahnikk qertqqiitv rraiphpryn dktwtndiml lqlkrkakvt
      121 tavspislpr dwdtvnpgml csvagwgrld vdmshpnklq evqlevqrae kctsrykyyr
      181 tttqicagdp gkrkssfkvf trissflpwi qttmkqyelq gpd
//
LOCUS       XP_061015635             136 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: mast cell protease 2-like [Dama dama].
ACCESSION   XP_061015635
VERSION     XP_061015635.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159652.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..136
                     /product="LOW QUALITY PROTEIN: mast cell protease 2-like"
                     /calculated_mol_wt=14729
     Region          <1..132
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            order(86,107,109)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..136
                     /gene="LOC133068419"
                     /coded_by="XM_061159652.1:1..411"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /db_xref="GeneID:133068419"
ORIGIN      
        1 mllklkekas ltlamgtlcl ptqftfirpw rmcwvagwgk tdvkepasst lqevelrime
       61 pqacslfpaf dhslqlcvgh pqstksafkg dsggpllcag vaqgivsxqq snakppavft
      121 qishyrpwid evlnen
//
LOCUS       XP_061015636             252 aa            linear   MAM 02-DEC-2023
DEFINITION  mast cell protease 1A-like [Dama dama].
ACCESSION   XP_061015636
VERSION     XP_061015636.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159653.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..252
                     /product="mast cell protease 1A-like"
                     /calculated_mol_wt=27945
     Region          21..242
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            21
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(64,108,202)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(196,217,219)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..252
                     /gene="LOC133068420"
                     /coded_by="XM_061159653.1:18..776"
                     /db_xref="GeneID:133068420"
ORIGIN      
        1 mvlflllaal llfptgeagk iiggheakph shpymafvey qvsediffcg gflvcedfvl
       61 taahclgssi nvtlgahnir eqertqqvip vrramlhpwy ndktwandim llqlawkadm
      121 tdaaspinlp rrwqkvnpgm mcsvagwgrl evdmpsadkl qevdlevqse ekciarfrny
      181 npitqicagd pnkrknsysg dsggplvcdg vaqgivsygr ddgttpdvyt rissflpwiq
      241 ttmrqykcqg sa
//
LOCUS       XP_061015637             215 aa            linear   MAM 02-DEC-2023
DEFINITION  duodenase-1-like isoform X1 [Dama dama].
ACCESSION   XP_061015637
VERSION     XP_061015637.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159654.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..215
                     /product="duodenase-1-like isoform X1"
                     /calculated_mol_wt=23998
     Region          21..>197
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            21
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     CDS             1..215
                     /gene="LOC133068421"
                     /coded_by="XM_061159654.1:14..661"
                     /db_xref="GeneID:133068421"
ORIGIN      
        1 mvlflllval llsptgeagk iiggheakph srpymaflrf kisgkphicg gflvredfvl
       61 taahclgssi dvtlgahsim erertqqvip vrrafphphy ndktfendim llqlawkadm
      121 tdavspislp rsfekvnpgm mcsvagwgrl evnmpsadkl qevdlevqse erciarfrny
      181 ipvtqicagd pnkrknsfsl tgnkptderl qnrrn
//
LOCUS       XP_061015639             252 aa            linear   MAM 02-DEC-2023
DEFINITION  mast cell protease 1A-like isoform X2 [Dama dama].
ACCESSION   XP_061015639
VERSION     XP_061015639.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159656.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..252
                     /product="mast cell protease 1A-like isoform X2"
                     /calculated_mol_wt=27744
     Region          21..242
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            21
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(64,108,202)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(196,217,219)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..252
                     /gene="LOC133068421"
                     /coded_by="XM_061159656.1:49..807"
                     /db_xref="GeneID:133068421"
ORIGIN      
        1 mvlflllval llsptgeagk iiggheakph srpymaflrf kisgkphicg gflvredfvl
       61 taahclgssi dvtlgahsim erertqqvip vrrafphphy ndktfendim llqlawkadm
      121 tdavspislp rsfekvnpgm mcsvagwgrl evnmpsadkl qevdlevqse erciarfrny
      181 ipvtqicagd pnkrknsfsg dsggplvcdg vaqgivsygd vygtapnvyt rvssfltwiq
      241 ktmrqykqqg sa
//
LOCUS       XP_061015640             252 aa            linear   MAM 02-DEC-2023
DEFINITION  mast cell protease 1A-like [Dama dama].
ACCESSION   XP_061015640
VERSION     XP_061015640.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159657.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..252
                     /product="mast cell protease 1A-like"
                     /calculated_mol_wt=27601
     Region          21..242
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            21
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(64,108,202)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(196,217,219)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..252
                     /gene="LOC133068422"
                     /coded_by="XM_061159657.1:140..898"
                     /db_xref="GeneID:133068422"
ORIGIN      
        1 mvlllllaal llsptgeagk iiggheakph srpymaylqi htaenilicg gflvrgdfvl
       61 taahclgssi nvtlgahnik kqertqqvia vrraiphpry ndktwtndim llqlkrkakv
      121 ttavspislp rdwdtvnpgm lcsvagwgrl dvdmshpnkl qevelevqsa ekctsrykyy
      181 rtttqicagd pgkrkssfkg dsggplvcng vaqgivsygt kdgtpprvft rissflpwiq
      241 ttmkqyelqg pd
//
LOCUS       XP_061015641             247 aa            linear   MAM 02-DEC-2023
DEFINITION  cathepsin G-like [Dama dama].
ACCESSION   XP_061015641
VERSION     XP_061015641.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159658.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..247
                     /product="cathepsin G-like"
                     /calculated_mol_wt=27726
     Region          21..241
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            21
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(64,108,201)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(195,216,218)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..247
                     /gene="LOC133068424"
                     /coded_by="XM_061159658.1:38..781"
                     /db_xref="GeneID:133068424"
ORIGIN      
        1 mrallllvaf llfpraragq iiggrearph srpymafili rtpvglkvcg gflvrddfvm
       61 taahclgsqm nvilgahnvr tlegtqqrip vlrpiphpgy spqshrndim llqlanrvqr
      121 nrfvrpvplp qtqnrlrpgt rctvagwglt glntrtdtlq yvqlrvqrdr lcsrrftsyn
      181 grtqicvgdp rqrksaflgd sggplvcnnv aqgvvsygdr mgtppavftr issflpwirr
      241 tmrrfke
//
LOCUS       XP_061015642             250 aa            linear   MAM 02-DEC-2023
DEFINITION  mast cell protease 3-like isoform X1 [Dama dama].
ACCESSION   XP_061015642
VERSION     XP_061015642.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159659.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..250
                     /product="mast cell protease 3-like isoform X1"
                     /calculated_mol_wt=27450
     Region          21..240
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            21
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(64,108,202)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(196,217,219)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..250
                     /gene="LOC133068425"
                     /coded_by="XM_061159659.1:110..862"
                     /db_xref="GeneID:133068425"
ORIGIN      
        1 mvlflllaal llfptgeagk iiagqeakph srpymaylqf ktagrphicg gflvredfvl
       61 taahcqgrsm kvklgahdik kkektqqfiw vrraiphpgy nsetdvndlm llqlkrkakv
      121 tagvstiglp sgsdtvkpgm lcsvagwgll svngttankl qevelevqrd eeckahykny
      181 ntdiqicvgn prmrknameg dsggplvcng vaqgivsyga dtppdvytri srfqqwiket
      241 mkmyklqgpd
//
LOCUS       XP_061015643             227 aa            linear   MAM 02-DEC-2023
DEFINITION  duodenase-1-like isoform X2 [Dama dama].
ACCESSION   XP_061015643
VERSION     XP_061015643.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159660.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..227
                     /product="duodenase-1-like isoform X2"
                     /calculated_mol_wt=24829
     Region          21..217
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            21
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(173,194,196)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..227
                     /gene="LOC133068425"
                     /coded_by="XM_061159660.1:110..793"
                     /db_xref="GeneID:133068425"
ORIGIN      
        1 mvlflllaal llfptgeagk iiagqeakph srpymaylqf ktagrphicg gflvredfvl
       61 taahcqgrsm kvklgahdik kkektqqfiw lkrkakvtag vstiglpsgs dtvkpgmlcs
      121 vagwgllsvn gttanklqev elevqrdeec kahyknyntd iqicvgnprm rknamegdsg
      181 gplvcngvaq givsygadtp pdvytrisrf qqwiketmkm yklqgpd
//
LOCUS       XP_061015644             246 aa            linear   MAM 02-DEC-2023
DEFINITION  granzyme B-like [Dama dama].
ACCESSION   XP_061015644
VERSION     XP_061015644.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159661.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..246
                     /product="granzyme B-like"
                     /calculated_mol_wt=27332
     Region          21..242
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            21
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(64,108,202)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(196,217,219)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..246
                     /gene="LOC133068426"
                     /coded_by="XM_061159661.1:146..886"
                     /db_xref="GeneID:133068426"
ORIGIN      
        1 mqpflllvaf lltprakage iiggheakph srpymaylky wveddemtcg gflvrqdfvl
       61 taahckgssi svtlgahnik qrertqqvir vrraiphpdy npkdfsndim llklerkakq
      121 tsavkpvslp ramaqvkpgq tcsvagwgkd smttypetlq evklivqedr kceshlsnyy
      181 nhttqlcvgd pktkktsfqg dsggplmcgn vaqgivsygr kdgstprayt klssflpwik
      241 ktmksl
//
LOCUS       XP_061015645             493 aa            linear   MAM 02-DEC-2023
DEFINITION  forkhead box protein G1 [Dama dama].
ACCESSION   XP_061015645
VERSION     XP_061015645.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159662.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..493
                     /product="forkhead box protein G1"
                     /calculated_mol_wt=52580
     Region          185..263
                     /region_name="FH_FOXG"
                     /note="Forkhead (FH) domain found in the Forkhead box
                     protein G (FOXG) subfamily; cd20021"
                     /db_xref="CDD:410795"
     Region          <188..>360
                     /region_name="COG5025"
                     /note="Transcription factor of the Forkhead/HNF3 family
                     [Transcription]"
                     /db_xref="CDD:227358"
     Site            order(190,208..209,212,231..232,234..235,238,245,255..257,
                     259)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410795"
     CDS             1..493
                     /gene="FOXG1"
                     /coded_by="XM_061159662.1:1..1482"
                     /db_xref="GeneID:133068429"
ORIGIN      
        1 mldmgdrkev kmipkssfsi nslvpeavqn dnhhashghh nshhpqhhhh hhhhhhhppp
       61 papqpppqqq pppppppppq apqppqarga paadddkgpq qlllpppppp ppppppaaal
      121 dgakadglgg kgepgggpge lapvgpdeke kgagaggeek kgageggkdg eggkegekkn
      181 gkyekppfsy nalimmairq spekrltlng iyefimknfp yyrenkqgwq nsirhnlsln
      241 kcfvkvprhy ddpgkgnywm ldpssddvfi ggttgklrrr sttsraklaf krgarltstg
      301 ltfmdragsl ywpmspflsl hhprasstls yngttsayps hpmpyssvlt qnslgnnhsf
      361 stanglsvdr lvngeipyat hhltaaalaa svpcglsvpc sgtyslnpcs vnllagqtsy
      421 ffphvphpsm tsqsstsmsa raassstspq apstlpcesl rpslpsfttg lsgglsdyft
      481 hqnqgsssnp lih
//
LOCUS       XP_061015647             340 aa            linear   MAM 02-DEC-2023
DEFINITION  probable G-protein coupled receptor 33 [Dama dama].
ACCESSION   XP_061015647
VERSION     XP_061015647.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159664.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..340
                     /product="probable G-protein coupled receptor 33"
                     /calculated_mol_wt=39175
     Region          30..310
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          32..56
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320248"
     Region          64..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320248"
     Region          102..124
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320248"
     Region          147..163
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320248"
     Region          203..226
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320248"
     Region          244..266
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320248"
     Region          278..303
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320248"
     CDS             1..340
                     /gene="GPR33"
                     /coded_by="XM_061159664.1:1..1023"
                     /db_xref="GeneID:133068431"
ORIGIN      
        1 mdltnstdyl lndstlirnr thistsasav ivvvllfmsf ligtitngly lwvlkfkmkk
       61 tvntllyfhl ilsyfisilf lpvlaishlq dnhwsfgrat ckifnsilya amfasvffis
      121 aisvdryllt fhpvwsqlhr tprwassiil giwifaaalg mpyvvfreth adhrgrvtcq
      181 nnyavstnwe skkmqtlrkw ihvacfssrf llgfllpfli itfcyekvak kmkergllks
      241 skpfkvmmta ivsffvcwmp yhvyqglllt enrslffqvt llltvvtttf ntvfsptlyl
      301 figenfrkvf kksvlvlfes tfsedssser tenlnseadm
//
LOCUS       XP_061015648             346 aa            linear   MAM 02-DEC-2023
DEFINITION  myeloid-associated differentiation marker-like [Dama dama].
ACCESSION   XP_061015648
VERSION     XP_061015648.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159665.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 13% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..346
                     /product="myeloid-associated differentiation marker-like"
                     /calculated_mol_wt=38582
     Region          57..180
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     Region          192..337
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     CDS             1..346
                     /gene="LOC133068434"
                     /coded_by="XM_061159665.1:1..1041"
                     /db_xref="GeneID:133068434"
ORIGIN      
        1 mliysavssr hsslgsywve vslpnekesh vkaklggrgf tiattshvis sprlcshpig
       61 vyrllqlfst caafslvasl gtgmgavshw smfiwcfcfv itlitfivql geyqpslpfs
      121 grsflftyac laavfclsas imyaityiqf lphgpfrdqa taatafscia cvlyalegvf
      181 lwllflgett fyfatihglf klletsvaci ifafisstyl hqhqpalvwc vavysvcftl
      241 gavamllklv kfenrlytff prfllgqtvl svllyasalv lwplyqfnee fggqpqrssd
      301 ascsdellst lciwdqkltv ailtainlli yvadmaywih fifiry
//
LOCUS       XP_061015649             161 aa            linear   MAM 02-DEC-2023
DEFINITION  taste receptor cell protein 1-like [Dama dama].
ACCESSION   XP_061015649
VERSION     XP_061015649.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159666.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 40% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..161
                     /product="taste receptor cell protein 1-like"
                     /calculated_mol_wt=17539
     CDS             1..161
                     /gene="LOC133068439"
                     /coded_by="XM_061159666.1:1..486"
                     /db_xref="GeneID:133068439"
ORIGIN      
        1 mgekaelvlc evwlqildqp faealkdkts pqsqrlrgql trwlttvlrp lqtfgqvvve
       61 kfqpdpltar vtatffsptp aqalvqgcvl qglralrete glsvqmvipd lasgqpdtfi
      121 pcyavaliil gllflvltlv lvsvclgqrc lperqagplt l
//
LOCUS       XP_061015650              94 aa            linear   MAM 02-DEC-2023
DEFINITION  cytochrome c oxidase subunit 7C, mitochondrial-like [Dama dama].
ACCESSION   XP_061015650
VERSION     XP_061015650.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159667.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 38% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..94
                     /product="cytochrome c oxidase subunit 7C,
                     mitochondrial-like"
                     /calculated_mol_wt=10604
     Region          48..93
                     /region_name="Cyt_c_Oxidase_VIIc"
                     /note="Cytochrome c oxidase subunit VIIc. Cytochrome c
                     oxidase (CcO), the terminal oxidase in the respiratory
                     chains of eukaryotes and most bacteria, is a multi-chain
                     transmembrane protein located in the inner membrane of
                     mitochondria and the cell membrane of...; cd00929"
                     /db_xref="CDD:238469"
     Site            order(50..52,54,56..57,59,62..63,65,75,78..80,83..84,86,
                     89..90,93)
                     /site_type="other"
                     /note="Subunit VIIc/I interface [polypeptide binding]"
                     /db_xref="CDD:238469"
     Site            order(65,80,84,88)
                     /site_type="other"
                     /note="Subunit VIIc/VIIIb interface [polypeptide binding]"
                     /db_xref="CDD:238469"
     Site            order(89,93)
                     /site_type="other"
                     /note="Subunit VIIc/VIIa interface [polypeptide binding]"
                     /db_xref="CDD:238469"
     CDS             1..94
                     /gene="LOC133068441"
                     /coded_by="XM_061159667.1:1..285"
                     /db_xref="GeneID:133068441"
ORIGIN      
        1 mvptstsevp tgfclssscy kinnlyafcr asnsatlgqn iwkfttwshy eegpwknipf
       61 saenkwrllt mmtllfgsgf aapfftvrhq llkk
//
LOCUS       XP_061015652             687 aa            linear   MAM 02-DEC-2023
DEFINITION  A-kinase anchor protein 8-like [Dama dama].
ACCESSION   XP_061015652
VERSION     XP_061015652.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159669.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..687
                     /product="A-kinase anchor protein 8-like"
                     /calculated_mol_wt=75608
     Region          416..547
                     /region_name="AKAP95"
                     /note="A-kinase anchoring protein 95 (AKAP95); pfam04988"
                     /db_xref="CDD:461509"
     CDS             1..687
                     /gene="LOC133068442"
                     /coded_by="XM_061159669.1:1..2064"
                     /db_xref="GeneID:133068442"
ORIGIN      
        1 mylrerrlcr gygawsagpt ntqgtygtgv aswqgyenyn yygaqntsvt agatynygpa
       61 sweatkasdg lapggpamhm asygpepctd ssdsliakin qrldmmskeg grggsssgge
      121 gmqdressfr fqsfesydsr pclpehnpyr psysydydfd lgpdrnggfg gqysdcrdpa
      181 rergaldgfm rgrgqgrfqd rsnpstfmrg dpfmppaass eplstpwtem nyvggrglgg
      241 pspgrpppsl fsqsmapdfg mmgmqgaggy dnpvpygcgr sqtrirdqpr rrgfnrcgpe
      301 slgrkrkqlq iydepdtkqa radsegefse nddgagdfrs gdeefkgede ffdsgrqrge
      361 kddeddevkk rrekqrrrdr mrdraadriq facsvckfrs fedeeiqkhl qskfhketlr
      421 fistklpdkt veflqeyiin rnkkiekrrq elmekestkp kpdpfkgigq ehffkkieaa
      481 hclacdmlip aqpqllqrhl hsvdhnhnrl laaeqfkkts lhvaksvlnn rhivkmleky
      541 lkgedpftse agdaeiegde nlggedkeet peevaaqvla evitaavrav dgeeapapes
      601 gemlakrddp adtaeaasgp hpeaetpcgm apekgnteae aggeaaeagv aaeamaaqse
      661 stvtvtaaae atagqtdaes rdavpte
//
LOCUS       XP_061015653             227 aa            linear   MAM 02-DEC-2023
DEFINITION  cleavage and polyadenylation specificity factor subunit 5-like
            [Dama dama].
ACCESSION   XP_061015653
VERSION     XP_061015653.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159670.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..227
                     /product="cleavage and polyadenylation specificity factor
                     subunit 5-like"
                     /calculated_mol_wt=25665
     Region          39..221
                     /region_name="NUDIX_Cfim25_Nudt21"
                     /note="25 kDa subunit of cleavage factor Im; cd18871"
                     /db_xref="CDD:467583"
     CDS             1..227
                     /gene="LOC133068443"
                     /coded_by="XM_061159670.1:1..684"
                     /db_xref="GeneID:133068443"
ORIGIN      
        1 mavvppnrsq ngwprgvtqf snkyiqqakp ltlertinly plihslfgtk eplyekassv
       61 aarfqhmrke fdkigmrrav epvliihehr lphvlllqlg ttffklpggg lntgedeveg
      121 lqclmteisg hqggvlqdwv fdncignwwr pnfeppqypy ipvhitkpke hkklflvqlq
      181 ekallavpkn yklvaaplfe lcnnapgcgp iissfpqlls rvsfiyn
//
LOCUS       XP_061015654             543 aa            linear   MAM 02-DEC-2023
DEFINITION  insulinoma-associated protein 2 [Dama dama].
ACCESSION   XP_061015654
VERSION     XP_061015654.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159671.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..543
                     /product="insulinoma-associated protein 2"
                     /calculated_mol_wt=57297
     Region          <28..201
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          247..267
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          273..295
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          275..295
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(275,278,291,295)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          403..425
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          405..425
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(410,412,414,416..417,420..421,424,454,456,460..461,
                     464..465,468,509,511,513,515..516,519..520,524)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          449..469
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(449,452,465,469)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          504..525
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..543
                     /gene="INSM2"
                     /coded_by="XM_061159671.1:1..1632"
                     /db_xref="GeneID:133068445"
ORIGIN      
        1 mprgflvkrt krtggsyrvr laervfplle ppgappfpee assapqpgve reapptleee
       61 aarelsgssc raarvspaag gregvewrad gregpgpsps ptkpagvelr raflerclss
      121 pvsaesfpgg aaavasfscs vapaaaptsg eqfllplrap fpepalhpdp aplkratggd
      181 rrakapsgca sgpaaagvkk pkamrklsfa devttspvlg lkikeeepga psrgpggsrt
      241 plgeficqlc keqyadpfal aqhrcsrivr veyrcpecdk vfscpanlas hrrwhrprpa
      301 aanaatissa dgklppssss pdsrtvacfl aegkensrae rtadqhprar dssgeeqhqd
      361 sasqpglqvl shpepplpys agllgrrvpe pssasgvggp eifvcpychk kfrrqaylrk
      421 hlgtheagsa ralgagfgse rggplafacp lcgahfpsad irdkhrlwha vrdelllpal
      481 agappdapnp ggasdgsaqq ifsckhcpst ffsspgltrh iskchpsesr qvlllqmplr
      541 pgc
//
LOCUS       XP_061015655             400 aa            linear   MAM 02-DEC-2023
DEFINITION  homeobox protein Nkx-2.1 [Dama dama].
ACCESSION   XP_061015655
VERSION     XP_061015655.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159672.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..400
                     /product="homeobox protein Nkx-2.1"
                     /calculated_mol_wt=41588
     Region          192..248
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..400
                     /gene="NKX2-1"
                     /coded_by="XM_061159672.1:1..1203"
                     /db_xref="GeneID:133068446"
ORIGIN      
        1 mwsggsgkar gweaaaggrs gpgrlsrrri msmspkhttp fsvsdilspl eesykkvgme
       61 ggglgaplaa yrqgqaappa aamqqhavgh hgavtaayhm taagvpqlsh savggycngn
      121 lgnmselppy qdtmrnsasg pgwyganpdp rfpaisrfmg pasgmnmsgm gglgslgdvs
      181 knmaplpsap rrkrrvlfsq aqvyelerrf kqqkylsape rehlasmihl tptqvkiwfq
      241 nhrykmkrqa kdkaaqqqlq qdsgggggga gcqqqqqqaq qqsprrvavp vlvkdgkpcq
      301 agapapgaas lqghaqqqaq qqaqaaqaaa aaisvgsggp glgahpghqp gsagqspdla
      361 hhaaspaalq gqvsslphln ssgsdygtms cstllygrtw
//
LOCUS       XP_061015656             237 aa            linear   MAM 02-DEC-2023
DEFINITION  homeobox protein Nkx-2.8 [Dama dama].
ACCESSION   XP_061015656
VERSION     XP_061015656.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159673.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..237
                     /product="homeobox protein Nkx-2.8"
                     /calculated_mol_wt=25794
     Region          85..141
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..237
                     /gene="NKX2-8"
                     /coded_by="XM_061159673.1:1..714"
                     /db_xref="GeneID:133068447"
ORIGIN      
        1 matsgrlsft vrrlldlpeq daqhlrrrep elrapapgpc atwlesergh ypssdesspe
       61 asprdssqrp sarpaspgsd aekrkkrrvl fskaqtlele rrfrqqryls apereqlarl
      121 lrltptqvki wfqnhryklk rarapgvaea pdlaaaaevr aapgllrrvv vpvlvrdgqp
      181 cggsaqggta aardksaapp aaacpvpgya afgpgsafgl fpayqhlapp alvswnw
//
LOCUS       XP_061015657            1883 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: tetratricopeptide repeat protein 6 [Dama
            dama].
ACCESSION   XP_061015657
VERSION     XP_061015657.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159674.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1883
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1883
                     /product="LOW QUALITY PROTEIN: tetratricopeptide repeat
                     protein 6"
                     /calculated_mol_wt=214518
     Region          <41..271
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          914..942
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          921..1820
                     /region_name="PEP_TPR_lipo"
                     /note="putative PEP-CTERM system TPR-repeat lipoprotein;
                     TIGR02917"
                     /db_xref="CDD:274350"
     Region          947..977
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          982..1010
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          1015..1044
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(1050,1053..1054,1057..1058,1060,1084,1087..1088,
                     1091..1092,1094..1095,1118,1121..1122,1125,1128)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          1050..1077
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          1082..1112
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          1151..1181
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          1188..1215
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(1190..1191,1194..1195,1197,1222,1225..1226,
                     1229..1230,1232..1233,1256,1259..1260,1263..1264,1267)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          1220..1250
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          1255..1283
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          1294..1317
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          1326..1351
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          1367..1395
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(1368,1371..1372,1375..1376,1378,1402,1405..1406,
                     1409..1410,1412..1413,1435,1438..1439,1442..1443,1446)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          1394..>1566
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          1400..1429
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          1434..1462
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          1467..1497
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          1502..1525
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          1541..1567
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(1543..1544,1547..1548,1550,1574,1577..1578,
                     1581..1582,1584..1585,1608,1611..1612,1615..1616,1619)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          1545..1840
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          1572..1602
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          1607..1637
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          1643..1673
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          1680..1706
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          1711..>1880
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          1711..1739
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(1712,1715..1716,1719..1720,1722,1746,1749..1750,
                     1753..1754,1756..1757,1780,1783..1784,1787..1788,1791)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          1744..1774
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          1779..1802
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          1813..1841
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          1846..1876
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..1883
                     /gene="TTC6"
                     /coded_by="XM_061159674.1:1..5652"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /db_xref="GeneID:133068450"
ORIGIN      
        1 mstiskhfgl kykeesyifk elekvrketk keflrikekl aakpavgevp vfglrvpnpa
       61 rhgakgstsr vgsqkpsgsp rvkgrappta tlpqpapqga prppgrrevv apgkgrpfrp
      121 qdfylrssaf lrhrpqkppv iapragtsrp vvlmpprvpt gkarahrgsr spppadskpv
      181 ldpargrvps lepaqlaevg qarerlpdsl fsdegdaeaa grrrrvrina rflpedsdge
      241 sreapgsask tdresippsd sreaapqapq pvrvipksie eiiaslqsea qlasdqtike
      301 liqsvlgqny nikmedislm gkmywqkapq mqaeqgsqis mketqtnvle rlpetlsstl
      361 qieqedvlew gtsdaesslf kpqeasevqs asesskpleg sqpigdskmt kriplkvkss
      421 ellqikgkev krrrkskfgv ipqrpkkisk pmcdqklpkk kipedystwt lhnlctaipa
      481 kelpidlrva srvyhtadkk ghntvlgvfg tsllddrytd keqrdrilhg apvkdvsqeh
      541 vavvptrpgi lpelipgtgq sahkpqlqlf geevstypgv tklfxnltsp kfsvpvsvmk
      601 etvypkyesa qtsriliekf aseskesiit lnqhrkssrl fflrkaasfe nvqkhfstqs
      661 tqlkrvksav elikeettvl sgiqddmqsn ikevmlqkak elerwmteqn etkesvseke
      721 nidsildymh srygsrdlsf tlieasrqag ityivypkkk kmrrrrglrl skltlvydel
      781 skppnilkrs vshgilpgek kcllrvplye rvlrcpsvpl glnsdkcaqi krilehsdpq
      841 twspemvsqp kqkkttprvk isvdedsseg vkqspklels dsltcglppa vikhyeseve
      901 ilteeinskk kypaflycrr galyrklgkl qsamndlqea ifleplflna ywhrhfiylf
      961 qdkinealdd lnfinkynkn nadayfsrae ifrekneitl ailnytqaik crpmdadmyf
     1021 rrgemyeien kmlaiddfsk cifydpkrtd alfkrgmfyy enenwiaaeq dftallnidp
     1081 qnsqarmyrg rtyfqrhfyk qavqdlsiav hlepnnwlal yyraclfrks nplralqdys
     1141 vsalindgye nlscflhrgi lyadlklwwl aicdfeavic lertitlayi nigliyllhl
     1201 dnyieatsyf seairhdpmy iqsyicraea ysklhklkks vrelsyaihl qpdgiqlyii
     1261 rgqyllrmrc ydlakftiyq vaemnkglie lspiqqaliy sfcenhdkav qvldgimvnk
     1321 pdvpmcilla kaqmkakrnk eamrmfkkal dlisysdkgl nplaasadcl yhlglcymee
     1381 gslqlafdsf tkavranpdf pevfyhrglc kvrlhksgsi ldfnraitld pkhyqaylsr
     1441 vayyglkgry skailscnea ikiypqsvra yvyrgvlkyy srtyklaitd lttainmdkn
     1501 syiafynral cytkinelqm altdygivll lnagetvtln tfinrgliya eleqfsfale
     1561 dfkqaalisk tnvnlcqata icyhrnkefe eavnfftwav ridprflday igrgnsymey
     1621 ghdeatkqaq kdflkalhfn pvytkaricl gynlqaqgkf qkawnhftia mevdpksyla
     1681 yegravvclq mgdnfaafqd inaaikinat aefltnrgvi hefmgqkqna mrdyqeaisl
     1741 nptyslayfn agniyfhhrq fsqasdyfsk alkfdpenec aamnraiant vlkryeeake
     1801 dfayvvescp swaavyfnra yfycclkqya laeedlskal slkpndaliy nlraevrgki
     1861 glieeamady nkaldlqeha svv
//
LOCUS       XP_061015658              92 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein eL43 [Dama dama].
ACCESSION   XP_061015658
VERSION     XP_061015658.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159675.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..92
                     /product="large ribosomal subunit protein eL43"
                     /calculated_mol_wt=10144
     Region          1..90
                     /region_name="PTZ00255"
                     /note="60S ribosomal protein L37a; Provisional"
                     /db_xref="CDD:240332"
     CDS             1..92
                     /gene="LOC133068452"
                     /coded_by="XM_061159675.1:30..308"
                     /db_xref="GeneID:133068452"
ORIGIN      
        1 makrtkkvgi vgkygtryga slrkmvkkie isqhakytcs fcgktkmkrr avgiwhcgsc
       61 mktvaggawt ynttsavtvk sairrlkelk dq
//
LOCUS       XP_061015659             323 aa            linear   MAM 02-DEC-2023
DEFINITION  CLOCK-interacting pacemaker-like [Dama dama].
ACCESSION   XP_061015659
VERSION     XP_061015659.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159676.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..323
                     /product="CLOCK-interacting pacemaker-like"
                     /calculated_mol_wt=34531
     Region          29..300
                     /region_name="CiPC"
                     /note="Clock interacting protein circadian; pfam15800"
                     /db_xref="CDD:464879"
     CDS             1..323
                     /gene="LOC133068453"
                     /coded_by="XM_061159676.1:1..972"
                     /db_xref="GeneID:133068453"
ORIGIN      
        1 mtgvkladdf tgvdqqfpvd rfkvlllgds sqlqswtvqp sfevisaqpq llflhppvps
       61 pvspchagek ksdsrnylpi lnsytkiaph pgkrglsrsp eergeggmqk kvcterlgpg
      121 lsareptktg agpprpptpa ppsaklaeds alqgvpslva ggspqtlqpv ssshvakaps
      181 ltfaspaspv casdstlhgv esssplsppa asyssalwaa ehfcrspdsf peqrqskhrr
      241 fqntlvvlhk sglleitlkt kelirqnqat qveldqlkeq trlfieatks rapqawarlq
      301 asltsgsght ssdleafseq pdi
//
LOCUS       XP_061015661             208 aa            linear   MAM 02-DEC-2023
DEFINITION  large ribosomal subunit protein uL30-like [Dama dama].
ACCESSION   XP_061015661
VERSION     XP_061015661.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159678.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..208
                     /product="large ribosomal subunit protein uL30-like"
                     /calculated_mol_wt=24052
     Region          3..208
                     /region_name="uL30_euk"
                     /note="60S ribosomal protein uL30, eukaryotic form;
                     TIGR01310"
                     /db_xref="CDD:273548"
     CDS             1..208
                     /gene="LOC133068457"
                     /coded_by="XM_061159678.1:16..642"
                     /db_xref="GeneID:133068457"
ORIGIN      
        1 mlqkarrkli yekakhyhke yrqmyrtelr marlaqkagn fyvpvepkla fvirirging
       61 vspkarkvlq llclrqifsg tfvklnkasi dmlrivepyi awgyphlksv neliykhgyg
      121 kinkkrialt dnaliarslg kygiicmedl iheiytvgks fkeannflwp frlssppggm
      181 kkktthfveg gdagnredqi nrlirrmn
//
LOCUS       XP_061015662             462 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat and fibronectin type-III domain-containing
            protein 5 [Dama dama].
ACCESSION   XP_061015662
VERSION     XP_061015662.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159679.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..462
                     /product="leucine-rich repeat and fibronectin type-III
                     domain-containing protein 5"
                     /calculated_mol_wt=51528
     Region          53..76
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <69..>211
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          77..100
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          101..124
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          125..148
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          149..172
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          173..196
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          197..215
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          240..>272
                     /region_name="LRRCT"
                     /note="Leucine rich repeat C-terminal domain; smart00082"
                     /db_xref="CDD:214507"
     Region          287..374
                     /region_name="IgI_SALM5_like"
                     /note="Immunoglobulin domain of human Synaptic
                     Adhesion-Like Molecule 5 (SALM5) and similar proteins;
                     member of the I-set of IgSF domains; cd05764"
                     /db_xref="CDD:409421"
     Region          287..290
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409421"
     Region          294..297
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409421"
     Region          303..311
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409421"
     Site            order(309,311,319,326,361..363,365)
                     /site_type="other"
                     /note="PTPdelta binding site [polypeptide binding]"
                     /db_xref="CDD:409421"
     Region          317..322
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409421"
     Region          325..327
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409421"
     Region          333..337
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409421"
     Region          340..344
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409421"
     Region          354..361
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409421"
     Region          364..374
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409421"
     CDS             1..462
                     /gene="LRFN5"
                     /coded_by="XM_061159679.1:303..1691"
                     /db_xref="GeneID:133068458"
ORIGIN      
        1 mekflfylff igiavkaqic pkrcvcqils pnlatlcakk gllfvppnid rrtvelrlad
       61 nfvtnikrkd fanmtslvdl tlsrntisfi tphafadlrn lralhlnsnr ltkitndmfs
      121 glsnlhhlil nnnqltliss tafddvfale eldlsynnle tipwdavekm vslhtlsldh
      181 nmidnipkgt fshlhkmtrl dvtsnklqkl ppdplfqraq vlatsgiisp stfalsfggn
      241 plhcncellw lrrlsreddl etcaspallt gryfwsipee eflcepplit rhthemrvle
      301 gqratlrcka rgdpepaihw ispegklisn atrslvydng tldilittvk dtgaftcias
      361 npageatqtv dlhiiklphl lnstnhihep dpgssdists tksgsnasss ngdtklsqdk
      421 ivvaeatsst allkfnfqrn ipgirmfqiq yngtyddtlv yr
//
LOCUS       XP_061015663             389 aa            linear   MAM 02-DEC-2023
DEFINITION  nucleosome assembly protein 1-like 1 [Dama dama].
ACCESSION   XP_061015663
VERSION     XP_061015663.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159680.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..389
                     /product="nucleosome assembly protein 1-like 1"
                     /calculated_mol_wt=44745
     Region          74..343
                     /region_name="NAP"
                     /note="Nucleosome assembly protein (NAP); pfam00956"
                     /db_xref="CDD:460010"
     CDS             1..389
                     /gene="LOC133068459"
                     /coded_by="XM_061159680.1:76..1245"
                     /db_xref="GeneID:133068459"
ORIGIN      
        1 magidnkers eldqdlddve eveetgeemk ikarqltvqm mqnpqilaal qerldgllet
       61 ptgyieslps vvkrrvnalk nlqvkcaqie akfyedvhdl erkyavlyqp lfdkrfeiin
      121 aicepteeec ewkpdeedei seelkekaki edekkdeeke dpkgipefwl tvfknvdlls
      181 dmvqerdepi lkhlkdikvk fsdagqsmsf vlefhfepse yftnevltkt yrmrsepdds
      241 dpfsfdgpei mgctgcqidw kkgknvtlkt vkkkqkhkgr gtvrtvtktv sndsffnffa
      301 ppevpesgdl dddsetilta dfvighflce riiprsvlyf tgeaigdddd dydeegeead
      361 eegeeegdee ndpdydpkkd qnpaeckqq
//
LOCUS       XP_061015664             819 aa            linear   MAM 02-DEC-2023
DEFINITION  fibrous sheath CABYR-binding protein [Dama dama].
ACCESSION   XP_061015664
VERSION     XP_061015664.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159681.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..819
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..819
                     /product="fibrous sheath CABYR-binding protein"
                     /calculated_mol_wt=87807
     Region          <260..463
                     /region_name="rne"
                     /note="ribonuclease E; Reviewed; PRK10811"
                     /db_xref="CDD:236766"
     Region          672..>799
                     /region_name="Agg_substance"
                     /note="LPXTG-anchored aggregation substance; NF033875"
                     /db_xref="CDD:411439"
     CDS             1..819
                     /gene="FSCB"
                     /coded_by="XM_061159681.1:1..2460"
                     /db_xref="GeneID:133068462"
ORIGIN      
        1 meekdeseqs isagrqeirk rrrpsqpmvd ksqqtevtek kkqlsipqss gpkaalsign
       61 ipgsklnyec hrvssqlqqt wikrkrvqdm adkslqteti aeekkeeikl vceavvpeek
      121 paavevgpef pesvqevevp psrysaqvkt drsqqtsctg dwtmmnfpqk dkldkeqqty
      181 fseseivaig wltnsfsksk egaqkrkssg sifvsehpef qpttssseet rrqsisrtls
      241 ipptkkdspv pledekdvpv evqppaaeei saeeqlplye tiaeavpvev qpppseeapl
      301 evqpspaeea pgdeapakve pmpaeealse eppaeeapve iqpspveeaa gyeapakvea
      361 tsseetllke pltevqppea eeastqeape lqlspavesp aeeapaeaep ppaeespaee
      421 ppevqsppae qapaeeapev epppateapa eeppevqspp peqapageap aeaepppaee
      481 ahveeapevq fppaeeapae eapaeaeppp aeeapaeeap evqsppaeqt laeeapgeae
      541 pppaeeapte eplevqslpa eealekeape vqsvpagqap aeeglgfqsp padkapeeea
      601 pevqsppvdk gpeeegqglq slpaeeapee eapevqsppv eeapeeaape vqslpaeeap
      661 aeeppevqsl padeapaeea pevqspptee apaeetpael qspsteetts emvsvekqps
      721 lteepfitpi sleetsaevl lppseqtpad ealvenvspv dqapkeadvl vaklesgnle
      781 dkpkseeple rdtvpkdssd tkneavsfei qgvihiele
//
LOCUS       XP_061015666              67 aa            linear   MAM 02-DEC-2023
DEFINITION  thymosin beta-4-like [Dama dama].
ACCESSION   XP_061015666
VERSION     XP_061015666.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159683.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..67
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..67
                     /product="thymosin beta-4-like"
                     /calculated_mol_wt=7250
     Region          26..64
                     /region_name="Thymosin"
                     /note="Thymosin beta-4 family; pfam01290"
                     /db_xref="CDD:396038"
     CDS             1..67
                     /gene="LOC133068465"
                     /coded_by="XM_061159683.1:1..204"
                     /db_xref="GeneID:133068465"
ORIGIN      
        1 meedsvaqtr phslaacsap tttmsdkpcm aeienldksk lnktetqekn plpskemteq
       61 qkqages
//
LOCUS       XP_061015667            1764 aa            linear   MAM 02-DEC-2023
DEFINITION  stereocilin [Dama dama].
ACCESSION   XP_061015667
VERSION     XP_061015667.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159684.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1764
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1764
                     /product="stereocilin"
                     /calculated_mol_wt=191003
     CDS             1..1764
                     /gene="STRC"
                     /coded_by="XM_061159684.1:1..5295"
                     /db_xref="GeneID:133068466"
ORIGIN      
        1 malslrplll lscavtlvpt gsqsldsgls llksalsald qapqgslsrs rfsaflanis
       61 ssfepgrmge gpvgeppplq ppalrlhdfl vtlrgspdwe pmlgllgdvl allgqeqtpr
      121 dflghqagvl sglvevllga lvpggppapt rppctrdgps dcvlaadwlp slllllegtr
      181 wqalvrvqpg vdpanatgld grepaphllq gllgllapvg elgseealwg gllrtvgapl
      241 yatfqevllr itdslqdevf silgqpepda ngrcqggnlq qlllwgirhn lswdvralgf
      301 lsgspppppa llhclstgvp lprtsqpsah isprqrrais vealcenlsg pappysisnf
      361 siqllcqhak pvtprpppst pavcqtavwy avswapgaqg wlqachdqfp eqfldaicgn
      421 lsfstlsgpn rrlvkrlcag llppptscpe glppvpltpe ifwgcflene tlwaerlcge
      481 aslqavppsn qawvqhvcqg ptpdvtafpp cyigpcgerc pdggsfllmv candtmyeal
      541 vpswpwlagq crisrggndt cflegllgpl lpslpplgps plclapgpfl lgmlsqlprc
      601 qssvpalahp trlhyllrll tfllgpgagg neaqgmlgqa lmlsslpdnc sfwdafrpeg
      661 rrsvlrtvge fleqeeqptp gfdpadsprp alskmellac fspvlwdllq reksvwalqi
      721 lvqaylhmpp enlqqlvlsa ekeaaqgflt lmhrswaqlq vppseeqalg rltalllqry
      781 prltsqlfid lsplipflav sdlmrfppsl landsvlaai rdyspgmrpe qkealarrll
      841 apelfgevpa wpqellwaal pllphlplen flqlsphqiq aledswpaag lgpgharhvl
      901 rslvnqsved geeqvrrlgp lacfltpeel qslvplndpm gpvergllec aangtlspqg
      961 rvayellgvl rssggavlsp relrvwaplf pqlglrflqe lsepqlraml palrgaritp
     1021 aqavlllgrl lprrdlslee lcslhpllpg lssqtlqaip rrvllracpc lapelarlsa
     1081 cqtaallqtf rvkdgvkntg aagagaavci pgqpiptiwp dcllpllplk llqldsaall
     1141 adgrryrelt wseqqaqflw kkmqvptnlt lrnlqalgtl aggmsceflq qidsmadfle
     1201 vvhmiyqlpt gvrgslrici waelqrrmam pepelatlgp elsgldtkll ldlpvqlmdr
     1261 lsnesimlvv elvrgapeql laltplhraa laeralqnla pkettvsrev letlgplvgf
     1321 lgiestrrip lqillahlsq lqgfclgglf atelgwlllq epvlgkpelw sqdeveqagr
     1381 lvftlspeai sliprealgp etlerllekq rsweqsragq lcagpqlapk kaalvaglvr
     1441 paaenlpepv pncadvrgtf psawsvtqia kmklldfedc ltlfagdpgl gpeelraamg
     1501 kakqlwgppq gfrpeqilql grlliglger elqelslvdw gvlstlgqid gwsssqlrvv
     1561 vssflrqsgr hvshldflhl talgyalcgl rpeelqhins wefsqaalfl gnlhlpcsee
     1621 qlevlaellv lpggfgpvsn wgpeifteig tiaagipdla lsallrgqiq gltplaisvi
     1681 papkfavvfs ptqlssltsv qavavtpkqm aflspeqrra vawaqyegme sleqegrsta
     1741 wglqdwsqps walalticfl gnll
//
LOCUS       XP_061015668            1111 aa            linear   MAM 02-DEC-2023
DEFINITION  cation channel sperm-associated auxiliary subunit beta [Dama dama].
ACCESSION   XP_061015668
VERSION     XP_061015668.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159685.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1111
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1111
                     /product="cation channel sperm-associated auxiliary
                     subunit beta"
                     /calculated_mol_wt=126586
     Region          572..1090
                     /region_name="CATSPERB"
                     /note="Cation channel sperm-associated protein subunit
                     beta protein family; pfam15149"
                     /db_xref="CDD:464533"
     CDS             1..1111
                     /gene="CATSPERB"
                     /coded_by="XM_061159685.1:1..3336"
                     /db_xref="GeneID:133068468"
ORIGIN      
        1 melphlyvli lllnvfdfss gitynkgdte shfacdskgi ppkdemikly lssddlkiec
       61 ffqseveftt keflsvftsa glapsleiin stytgifhfn ltlysdrvyw lidiprenit
      121 kntdiatvee wlvritlqyg lniyttegtl ldtvrepilh wklgtmmnkr tiqrlyphvv
      181 dlkttkcpca ndvallgfvm nttfngvyig lsfsgfwdyd dtqwynltdm iysqvgeehk
      241 qlsvvdmvlt nhflviltsl glfisgdlry psssvlmlsr vdfcgfervd yikgklwyne
      301 rcfanrehfe vdyvtitfdr nrtlseansc fyskepflew lpclppvpkg tktilstvit
      361 vlvdqeqssa vylfhnqvgl kkntivsvri lkhnkpdliq rfpffsfpss fssplgmvfh
      421 prshflyayg nqvwlsidgg ntfdliadfh ddiikntyhs fytsditlvs qsgkvyltka
      481 glekysyigs isdkiftlyy dhmgfihklt pdhfeaggsl aafgnskgif gqafdmgfdt
      541 alapqyltln emifyayvpk nepkdrvytk rfydihfgkl ihsrktgtay irkvfqhntp
      601 egflssviae lidpfgteev nessclsssl siseagnysy klslqlqsvi ssfqdsdiek
      661 tvvipgyssl littildnen alavatmpei vphnmtfqkd swflynfgrr ngqtwniyan
      721 pcnywfqqhd dslslsvlky idlgkshtlk mkvipntkvl rlleipllqv ivgnpnllev
      781 kvegyfdesd syimevsaas ktlhqgstsl efivwgaste cyvttfvpml ksscsylksm
      841 hhipseiipl edwmsgvyin sqgfnmikvl pinyrppsnm giaipltdnf yhadpskpip
      901 rnlfykskrs gkfkqcanat trkecnctnd qkfsyavafs dcrekvprfk fpviqypisl
      961 qvysedgnfp vetpylvtvt evnnrenwnl rhtvpenvkk mknylesils apvynplgln
     1021 lsikgselfh frvsvvpgvs fcnlveefqi yvdevplpfp ghtliavaaa vllgglifia
     1081 fmfqirnihp wdtfkklirr nnvnptntta n
//
LOCUS       XP_061015669             109 aa            linear   MAM 02-DEC-2023
DEFINITION  ribosomal biogenesis factor-like [Dama dama].
ACCESSION   XP_061015669
VERSION     XP_061015669.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159686.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..109
                     /product="ribosomal biogenesis factor-like"
                     /calculated_mol_wt=12427
     Region          45..>86
                     /region_name="DUF4665"
                     /note="Domain of unknown function (DUF4665); pfam15679"
                     /db_xref="CDD:464797"
     CDS             1..109
                     /gene="LOC133068469"
                     /coded_by="XM_061159686.1:738..1067"
                     /db_xref="GeneID:133068469"
ORIGIN      
        1 meiteekdse lenrsilpnl knteemrtyg vtwnlnsctr lpemmaknkl rgqksrnifq
       61 iasqksfkik nkakpattnl nkintvipqq cheskpanvd etirlvvql
//
LOCUS       XP_061015670             603 aa            linear   MAM 02-DEC-2023
DEFINITION  sodium/potassium/calcium exchanger 4 [Dama dama].
ACCESSION   XP_061015670
VERSION     XP_061015670.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159687.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..603
                     /product="sodium/potassium/calcium exchanger 4"
                     /calculated_mol_wt=66881
     Region          <80..587
                     /region_name="2A1904"
                     /note="K+-dependent Na+/Ca+ exchanger; TIGR00927"
                     /db_xref="CDD:273344"
     CDS             1..603
                     /gene="SLC24A4"
                     /coded_by="XM_061159687.1:73..1884"
                     /db_xref="GeneID:133068470"
ORIGIN      
        1 malrgppgpr kvrrrremlp qqvgfvcail alvccasglf gswghrtasv skyvlpdtwr
       61 nrrlmapvng teaaknctdp aihefpadlf snnerqhgav llhilgalym fyalaivcdd
      121 ffvpslekic eklhlsedva gatfmaagss tpelfasvig vfithgdvgv gtivgsavfn
      181 ilciigvcgl fagqvvrltw wavcrdsvyy tlsvivliaf iydeeivwwe glvliilyvf
      241 yilimkynvk mqafftikqk tvangntvns eledvkeepq ynknpvvmvd evmsssppkf
      301 tfpeaglrvm itnkfgprtr lrmasriiin erqrlinsan gvsskplqng rhesiengnv
      361 pvenleepqr dqepppqppp ppqepepvea aflspfsmpe argdkvkwvf twplifllcv
      421 tipncskprw ekffmltfvi atlwiavfsy lmvwlvtiig ytlgipdvim gitflaagts
      481 vpdcmasliv arqglgdmav sntigsnvfd ilvglgipwg lqtmvvnygs tvkinsrglv
      541 ysvalllgsv altvlgihln kwkldrklgv yvlvlyavfl cfsimiefnv ftfvnlpmcr
      601 edd
//
LOCUS       XP_061015671             293 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM181A [Dama dama].
ACCESSION   XP_061015671
VERSION     XP_061015671.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159688.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..293
                     /product="protein FAM181A"
                     /calculated_mol_wt=31515
     Region          1..281
                     /region_name="FAM181"
                     /note="pfam15238"
                     /db_xref="CDD:434560"
     CDS             1..293
                     /gene="FAM181A"
                     /coded_by="XM_061159688.1:31..912"
                     /db_xref="GeneID:133068474"
ORIGIN      
        1 masdsdvkml lnfvnlassd ikaaldksap crrsvdhrky lqkqlkrfsq kysrlprglp
       61 vrgaephlkr gpedrpgrll plesghgssp gggggckeka lgnpdreesl skertlhgld
      121 pgaarpgqvp mrkrqlpasf weeprpthsy pvglegglgp regppyegkk hckgleplgp
      181 etapvpaspr apaekeplkm pgvslvgrvs awsccpfqyh gqpvypsppg alpqspmpsl
      241 glwrksaasp gelahfckda egpgqkvyrp vvlkpiptkp avpppifnvf gyl
//
LOCUS       XP_061015673             133 aa            linear   MAM 02-DEC-2023
DEFINITION  interferon alpha-inducible protein 27-like protein 2 isoform X1
            [Dama dama].
ACCESSION   XP_061015673
VERSION     XP_061015673.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159690.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..133
                     /product="interferon alpha-inducible protein 27-like
                     protein 2 isoform X1"
                     /calculated_mol_wt=12380
     Region          <27..87
                     /region_name="Ifi-6-16"
                     /note="Interferon-induced 6-16 family; pfam06140"
                     /db_xref="CDD:461837"
     CDS             1..133
                     /gene="LOC133068475"
                     /coded_by="XM_061159690.1:32..433"
                     /db_xref="GeneID:133068475"
ORIGIN      
        1 mikraaaaai ggalavaavp avlgavgftg agiaassiaa kmmsaaavan gggvaagslv
       61 atlqsvgaag lstssnillg svgsvfgall ggakrappsp ppggsrpege qpgenvpqve
      121 ppkpplrsek hek
//
LOCUS       XP_061015674             133 aa            linear   MAM 02-DEC-2023
DEFINITION  interferon alpha-inducible protein 27-like protein 2A isoform X2
            [Dama dama].
ACCESSION   XP_061015674
VERSION     XP_061015674.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159691.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..133
                     /product="interferon alpha-inducible protein 27-like
                     protein 2A isoform X2"
                     /calculated_mol_wt=13007
     Region          <27..>66
                     /region_name="Ifi-6-16"
                     /note="Interferon-induced 6-16 family; pfam06140"
                     /db_xref="CDD:461837"
     CDS             1..133
                     /gene="LOC133068475"
                     /coded_by="XM_061159691.1:32..433"
                     /db_xref="GeneID:133068475"
ORIGIN      
        1 mikraaaaai ggalavaavp avlgavgftg agiaassiaa kmmsaaavan gggvaagslv
       61 atlqsvdlmd csppgssvhg isqaripewv aisfssgssh qesnphllhw qvpyhgarre
      121 awalglalpk sdt
//
LOCUS       XP_061015675             906 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein phosphatase 4 regulatory subunit 4 isoform
            X1 [Dama dama].
ACCESSION   XP_061015675
VERSION     XP_061015675.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159692.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..906
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..906
                     /product="serine/threonine-protein phosphatase 4
                     regulatory subunit 4 isoform X1"
                     /calculated_mol_wt=102769
     Region          168..192
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            order(184..185,188,191..192,224..225,228,231..232,235,
                     263..264,267,270..271,274,302..303,306,309..310)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          206..235
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          245..275
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          284..310
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          429..455
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          466..493
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     CDS             1..906
                     /gene="PPP4R4"
                     /coded_by="XM_061159692.1:39..2759"
                     /db_xref="GeneID:133068476"
ORIGIN      
        1 mhplspaaaa amdfsqnslf gymedlqelt iierpvrrsl ktpeeierlt vdedlsdier
       61 avyllsagqd iqgtsvianl pllmrqnpae tlrrvlpkvr vhedahlftq rvwislclsr
      121 gcdsveekqe ldalhvagve mqltaavsfl tilqdesvsv htyahsflqv illnldhrda
      181 gvsnawletl lsvievlpkd tlrheilnpl vskaqlsqtv qsrlvsckil gkltnkfdal
      241 aikreilplv kslcqdveye vrscmcrqle niaqgigtel tksvvlpeli elsrdegssv
      301 rlaafetlvn lldifdtddr sqtilpvvks fceksfkade silislsfhl gklchglygi
      361 ftpdqhlrfl efykklctlg lqqenghnen qippqileqe kkyisvrknc aynfpamivf
      421 vdpknfhmel ystffclchd pevpvrytia icfyevskll nsgvylihke litllqdesl
      481 evldalidhl peilelmstg gessvqenkl sslpdlvpal taaeqraaas lkwrthekll
      541 qkyaclpqvi ssdqiyyrfl qrmftimmtn nvlpvqkaas rtlciflryn rkqeqrhevi
      601 qklieqlgqg ksywnrlrfl dtcefiieif sksffckyff lpaielthdp vanvrmklcy
      661 llpkvkstlk ipadkhllqq lemcvrkllc qekdkdvlai vkrtvleldr memsmdafqk
      721 kfyekdlldq ekereellll emeqlekekq qndgrpmsdk tfekkrrdsk tptslpkslp
      781 ipvpgsssat pstskeikks klirsqsfnn qafhakygnl dkcttsksst aaytpsvsgl
      841 sktsmisltd dsfrtrntns apssfssnts lpstsrgtgn svdpkssgsk dtqprkatlk
      901 srksnp
//
LOCUS       XP_061015676             875 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein phosphatase 4 regulatory subunit 4 isoform
            X2 [Dama dama].
ACCESSION   XP_061015676
VERSION     XP_061015676.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159693.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..875
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..875
                     /product="serine/threonine-protein phosphatase 4
                     regulatory subunit 4 isoform X2"
                     /calculated_mol_wt=99158
     Region          137..161
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            order(153..154,157,160..161,193..194,197,200..201,204,
                     232..233,236,239..240,243,271..272,275,278..279)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          175..204
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          214..244
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          253..279
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          398..424
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          435..462
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     CDS             1..875
                     /gene="PPP4R4"
                     /coded_by="XM_061159693.1:39..2666"
                     /db_xref="GeneID:133068476"
ORIGIN      
        1 mhplspaaaa amdfsqnslf gymedlqelt iierpvrrsl ktpeeierlt vdedlsdier
       61 avyllsagqd iqgtsvianl pllmrqnpae tlrrvlpkvr dalhvagvem qltaavsflt
      121 ilqdesvsvh tyahsflqvi llnldhrdag vsnawletll svievlpkdt lrheilnplv
      181 skaqlsqtvq srlvsckilg kltnkfdala ikreilplvk slcqdveyev rscmcrqlen
      241 iaqgigtelt ksvvlpelie lsrdegssvr laafetlvnl ldifdtddrs qtilpvvksf
      301 ceksfkades ilislsfhlg klchglygif tpdqhlrfle fykklctlgl qqenghnenq
      361 ippqileqek kyisvrknca ynfpamivfv dpknfhmely stffclchdp evpvrytiai
      421 cfyevsklln sgvylihkel itllqdesle vldalidhlp eilelmstgg essvqenkls
      481 slpdlvpalt aaeqraaasl kwrthekllq kyaclpqvis sdqiyyrflq rmftimmtnn
      541 vlpvqkaasr tlciflrynr kqeqrheviq klieqlgqgk sywnrlrfld tcefiieifs
      601 ksffckyffl paielthdpv anvrmklcyl lpkvkstlki padkhllqql emcvrkllcq
      661 ekdkdvlaiv krtvleldrm emsmdafqkk fyekdlldqe kereelllle meqlekekqq
      721 ndgrpmsdkt fekkrrdskt ptslpkslpi pvpgsssatp stskeikksk lirsqsfnnq
      781 afhakygnld kcttskssta aytpsvsgls ktsmisltdd sfrtrntnsa pssfssntsl
      841 pstsrgtgns vdpkssgskd tqprkatlks rksnp
//
LOCUS       XP_061015677             155 aa            linear   MAM 02-DEC-2023
DEFINITION  serine/threonine-protein phosphatase 4 regulatory subunit 4 isoform
            X3 [Dama dama].
ACCESSION   XP_061015677
VERSION     XP_061015677.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159694.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..155
                     /product="serine/threonine-protein phosphatase 4
                     regulatory subunit 4 isoform X3"
                     /calculated_mol_wt=17607
     CDS             1..155
                     /gene="PPP4R4"
                     /coded_by="XM_061159694.1:39..506"
                     /db_xref="GeneID:133068476"
ORIGIN      
        1 mhplspaaaa amdfsqnslf gymedlqelt iierpvrrsl ktpeeierlt vdedlsdier
       61 avyllsagqd iqgtsvianl pllmrqnpae tlrrvlpkvr clprsmrmht ylpreygshy
      121 vcpegvtlwr rnrncgqsqm lksaqqeknp npdkt
//
LOCUS       XP_061015678             444 aa            linear   MAM 02-DEC-2023
DEFINITION  protein Z-dependent protease inhibitor [Dama dama].
ACCESSION   XP_061015678
VERSION     XP_061015678.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159695.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..444
                     /product="protein Z-dependent protease inhibitor"
                     /calculated_mol_wt=50726
     Region          65..442
                     /region_name="serpinA10_PZI"
                     /note="serpin family A member 10, protein Z-dependent
                     protease inhibitor; cd02055"
                     /db_xref="CDD:381011"
     Site            order(89..90,92..93,96,259..261,282..283,306,308..311,
                     314..315)
                     /site_type="other"
                     /note="protein Z binding site [polypeptide binding]"
                     /db_xref="CDD:381011"
     Site            order(394..404,411..419)
                     /site_type="other"
                     /note="reactive center loop (RCL)"
                     /db_xref="CDD:381011"
     CDS             1..444
                     /gene="SERPINA10"
                     /coded_by="XM_061159695.1:1..1335"
                     /db_xref="GeneID:133068477"
ORIGIN      
        1 mwavrslpla cllaqawlap gstlasrspe eqggletllt artqnktnqt serlwapgee
       61 egeedspwls tegqklsgea snlgfsllrk islkhdgnvv fsplglawam aaltlgargh
      121 sraqleelll qtlnqtrppr lpalfkrlre slshnpelgl aqgsfafihk dfdiretfln
      181 lskryfdtec vtvnfrntsq akrlmnhymn qqtqgklpkl fdeinpdtel ilvdyilfkg
      241 kwlipfdpal temdtfyldk yktvkvpmmy rsgkfastfd knfrchvlkl pyrgnasmlv
      301 vlmgrigdhl tledylttdl vdmwlrnmka rkmevffpkf kldqkykmhe llkqmgvrki
      361 fspwadlsnl vvternlkvs kvlqramiev deegteamag tlseitayym ppiirvdrpf
      421 lfivyeetsr tvlflgrvvn ptll
//
LOCUS       XP_061015679             404 aa            linear   MAM 02-DEC-2023
DEFINITION  corticosteroid-binding globulin [Dama dama].
ACCESSION   XP_061015679
VERSION     XP_061015679.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159696.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..404
                     /product="corticosteroid-binding globulin"
                     /calculated_mol_wt=45046
     Region          32..404
                     /region_name="serpinA6_CBG"
                     /note="serpin family A member 6, corticosteroid-binding
                     globulin; cd19554"
                     /db_xref="CDD:381022"
     Site            order(39..40,43,253,261,263,281,284..285,288,387,389,392)
                     /site_type="other"
                     /note="cortisol binding site [polypeptide binding]"
                     /db_xref="CDD:381022"
     Site            order(356..373,375..381)
                     /site_type="other"
                     /note="reactive center loop (RCL)"
                     /db_xref="CDD:381022"
     CDS             1..404
                     /gene="SERPINA6"
                     /coded_by="XM_061159696.1:93..1307"
                     /db_xref="GeneID:133068478"
ORIGIN      
        1 mlptlctcll wlstsglwtv qakgsgtdvs trnphrdlap nnvdfaftly khlvasapgk
       61 nvfispvsis talamlslga rgytreqllq glgfnltems eaeihrafrh lhhllresnt
      121 tlemtmgnal fldhslelle sfsadtkhyy eleslttdfq dwagasrqin eyiknktqgk
      181 ivdlfsesds samlilvnyi ffkgmwahsf dlestreedf yvnemttvkv pmmfqsntvk
      241 ylndsvlpcq lvqldytgne tvffvlpvkg kmdsvitals rdtiqrwsks ltisqvdlyi
      301 pkisisgayd lggimgdmgi adllrnrthf sgitqealpk vskvvhkaal qvdekgleaa
      361 aptrlslsaa peplalrfnr pfiimifddf twsslflgkv vnpt
//
LOCUS       XP_061015680             416 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-1-antiproteinase [Dama dama].
ACCESSION   XP_061015680
VERSION     XP_061015680.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159697.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..416
                     /product="alpha-1-antiproteinase"
                     /calculated_mol_wt=45847
     Region          48..415
                     /region_name="serpinA1_A1AT"
                     /note="serpin family A member 1, alpha-1-antitrypsin;
                     cd02056"
                     /db_xref="CDD:381012"
     Site            order(49,53,57,60,66..68,70..77,121,125,212,229..232,
                     234..235,238,242,251,262,265,268..279,282,285..286,289,
                     294,306..311,313..314,360,369..371,384..399,401..413)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:381012"
     Site            order(246,302,375..383)
                     /site_type="other"
                     /note="trypsin binding site [polypeptide binding]"
                     /db_xref="CDD:381012"
     Site            366..391
                     /site_type="other"
                     /note="reactive center loop (RCL)"
                     /db_xref="CDD:381012"
     CDS             1..416
                     /gene="LOC133068479"
                     /coded_by="XM_061159697.1:259..1509"
                     /db_xref="GeneID:133068479"
ORIGIN      
        1 mapsitqgll llaalcclvp islagvlhgh avqetddtsh qeaachkiap nlanfafsiy
       61 hqlahesnts niffspvsia safamlslga rgnthteile glgfnltela eteihkgfqh
      121 llhtlnqpnh qlqlttgngl finesaklvd tfledvknly hseafsinfr daeeakkkin
      181 dyvergshgk ivdlvkvldq dtvfalvnyi sfkgkwekpf evehttekdf hvdeqttvkv
      241 pmmnrlglfd lrycdtlsgw vllldyvgnv tacfilpdsg klqqledkln nellakflek
      301 kyassanlhl pklsisetyd lktvlgklgv tkvfsngadl sgitedqplk vskalhkaal
      361 tidekgteaa gatileaipm slppevefnr pflyiiydrn tksplfvgkv vnptqa
//
LOCUS       XP_061015681             416 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-1-antiproteinase [Dama dama].
ACCESSION   XP_061015681
VERSION     XP_061015681.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159698.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..416
                     /product="alpha-1-antiproteinase"
                     /calculated_mol_wt=45847
     Region          48..415
                     /region_name="serpinA1_A1AT"
                     /note="serpin family A member 1, alpha-1-antitrypsin;
                     cd02056"
                     /db_xref="CDD:381012"
     Site            order(49,53,57,60,66..68,70..77,121,125,212,229..232,
                     234..235,238,242,251,262,265,268..279,282,285..286,289,
                     294,306..311,313..314,360,369..371,384..399,401..413)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:381012"
     Site            order(246,302,375..383)
                     /site_type="other"
                     /note="trypsin binding site [polypeptide binding]"
                     /db_xref="CDD:381012"
     Site            366..391
                     /site_type="other"
                     /note="reactive center loop (RCL)"
                     /db_xref="CDD:381012"
     CDS             1..416
                     /gene="LOC133068479"
                     /coded_by="XM_061159698.1:251..1501"
                     /db_xref="GeneID:133068479"
ORIGIN      
        1 mapsitqgll llaalcclvp islagvlhgh avqetddtsh qeaachkiap nlanfafsiy
       61 hqlahesnts niffspvsia safamlslga rgnthteile glgfnltela eteihkgfqh
      121 llhtlnqpnh qlqlttgngl finesaklvd tfledvknly hseafsinfr daeeakkkin
      181 dyvergshgk ivdlvkvldq dtvfalvnyi sfkgkwekpf evehttekdf hvdeqttvkv
      241 pmmnrlglfd lrycdtlsgw vllldyvgnv tacfilpdsg klqqledkln nellakflek
      301 kyassanlhl pklsisetyd lktvlgklgv tkvfsngadl sgitedqplk vskalhkaal
      361 tidekgteaa gatileaipm slppevefnr pflyiiydrn tksplfvgkv vnptqa
//
LOCUS       XP_061015682             416 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-1-antiproteinase [Dama dama].
ACCESSION   XP_061015682
VERSION     XP_061015682.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159699.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..416
                     /product="alpha-1-antiproteinase"
                     /calculated_mol_wt=45847
     Region          48..415
                     /region_name="serpinA1_A1AT"
                     /note="serpin family A member 1, alpha-1-antitrypsin;
                     cd02056"
                     /db_xref="CDD:381012"
     Site            order(49,53,57,60,66..68,70..77,121,125,212,229..232,
                     234..235,238,242,251,262,265,268..279,282,285..286,289,
                     294,306..311,313..314,360,369..371,384..399,401..413)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:381012"
     Site            order(246,302,375..383)
                     /site_type="other"
                     /note="trypsin binding site [polypeptide binding]"
                     /db_xref="CDD:381012"
     Site            366..391
                     /site_type="other"
                     /note="reactive center loop (RCL)"
                     /db_xref="CDD:381012"
     CDS             1..416
                     /gene="LOC133068479"
                     /coded_by="XM_061159699.1:71..1321"
                     /db_xref="GeneID:133068479"
ORIGIN      
        1 mapsitqgll llaalcclvp islagvlhgh avqetddtsh qeaachkiap nlanfafsiy
       61 hqlahesnts niffspvsia safamlslga rgnthteile glgfnltela eteihkgfqh
      121 llhtlnqpnh qlqlttgngl finesaklvd tfledvknly hseafsinfr daeeakkkin
      181 dyvergshgk ivdlvkvldq dtvfalvnyi sfkgkwekpf evehttekdf hvdeqttvkv
      241 pmmnrlglfd lrycdtlsgw vllldyvgnv tacfilpdsg klqqledkln nellakflek
      301 kyassanlhl pklsisetyd lktvlgklgv tkvfsngadl sgitedqplk vskalhkaal
      361 tidekgteaa gatileaipm slppevefnr pflyiiydrn tksplfvgkv vnptqa
//
LOCUS       XP_061015683             416 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-1-antiproteinase [Dama dama].
ACCESSION   XP_061015683
VERSION     XP_061015683.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159700.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..416
                     /product="alpha-1-antiproteinase"
                     /calculated_mol_wt=45847
     Region          48..415
                     /region_name="serpinA1_A1AT"
                     /note="serpin family A member 1, alpha-1-antitrypsin;
                     cd02056"
                     /db_xref="CDD:381012"
     Site            order(49,53,57,60,66..68,70..77,121,125,212,229..232,
                     234..235,238,242,251,262,265,268..279,282,285..286,289,
                     294,306..311,313..314,360,369..371,384..399,401..413)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:381012"
     Site            order(246,302,375..383)
                     /site_type="other"
                     /note="trypsin binding site [polypeptide binding]"
                     /db_xref="CDD:381012"
     Site            366..391
                     /site_type="other"
                     /note="reactive center loop (RCL)"
                     /db_xref="CDD:381012"
     CDS             1..416
                     /gene="LOC133068479"
                     /coded_by="XM_061159700.1:107..1357"
                     /db_xref="GeneID:133068479"
ORIGIN      
        1 mapsitqgll llaalcclvp islagvlhgh avqetddtsh qeaachkiap nlanfafsiy
       61 hqlahesnts niffspvsia safamlslga rgnthteile glgfnltela eteihkgfqh
      121 llhtlnqpnh qlqlttgngl finesaklvd tfledvknly hseafsinfr daeeakkkin
      181 dyvergshgk ivdlvkvldq dtvfalvnyi sfkgkwekpf evehttekdf hvdeqttvkv
      241 pmmnrlglfd lrycdtlsgw vllldyvgnv tacfilpdsg klqqledkln nellakflek
      301 kyassanlhl pklsisetyd lktvlgklgv tkvfsngadl sgitedqplk vskalhkaal
      361 tidekgteaa gatileaipm slppevefnr pflyiiydrn tksplfvgkv vnptqa
//
LOCUS       XP_061015684             422 aa            linear   MAM 02-DEC-2023
DEFINITION  serpin A11 [Dama dama].
ACCESSION   XP_061015684
VERSION     XP_061015684.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159701.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..422
                     /product="serpin A11"
                     /calculated_mol_wt=47133
     Region          50..422
                     /region_name="serpin"
                     /note="SERine Proteinase INhibitors (serpin) family;
                     cl38926"
                     /db_xref="CDD:476815"
     Site            order(368..378,397)
                     /site_type="other"
                     /note="reactive center loop (RCL)"
                     /db_xref="CDD:381000"
     CDS             1..422
                     /gene="SERPINA11"
                     /coded_by="XM_061159701.1:47..1315"
                     /db_xref="GeneID:133068481"
ORIGIN      
        1 mgpawlwllg agilvsvhcq pfpahgeksp rvpeaphsql setlpayqki tptltsfalr
       61 lykqlaaetp gniffspvsl sstlallslg aqadtrtqil eglgfnltet peadihrgfq
      121 slihtldlps pklelklgns lfldmqlkpq qhildnirel ygvfafsanf tnsdatrkqi
      181 ndyvrrqtyg qvvdcleeft qdtfmvllny mffkakwkhp fdryqtrkqe sffvdgrtsl
      241 ripmmhqkem hrflydqeva ctvlkleysg naqallilpd pgkmaqveaa lqpdtlkkwd
      301 klllpslldl hlpkfsisgt ynleeilphi gltslfnsea dysgitgqln rtisrvshka
      361 tvdvsergte agvasgllsq prslkatlap harfnrpfll llwevttesp lflgkvvnpa
      421 ag
//
LOCUS       XP_061015686             420 aa            linear   MAM 02-DEC-2023
DEFINITION  uterine milk protein-like [Dama dama].
ACCESSION   XP_061015686
VERSION     XP_061015686.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159703.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..420
                     /product="uterine milk protein-like"
                     /calculated_mol_wt=47864
     Region          39..418
                     /region_name="serpin"
                     /note="SERine Proteinase INhibitors (serpin) family;
                     cl38926"
                     /db_xref="CDD:476815"
     Site            order(364..374,395)
                     /site_type="other"
                     /note="reactive center loop (RCL)"
                     /db_xref="CDD:381000"
     CDS             1..420
                     /gene="LOC133068482"
                     /coded_by="XM_061159703.1:59..1321"
                     /db_xref="GeneID:133068482"
ORIGIN      
        1 mshrrmhlal slvlilcglf nsifsekqqh sqqhmdltll kkiaalsqkm eahpkafaqe
       61 lfkaliiedp rkntifspva mtttlatlsl vikstmstnh pedlkldpel ldvhkhiqhl
      121 vhmghelvkk kqlkhhdilf insktvvhqm llqqisklqg vdiqmidftd kekakkaish
      181 hmtekthtki tdlitdlnpe tilylvnhvf fkgilktafq akltqkedff vndqtkvqvd
      241 mmrktermmy srseellatm vkmpckenvs lilvlpdagq fdsvlkkmtt kraklqktsd
      301 frlvhlvlpk fkisvkinlk hllhkidpkh mltttaisrd itlkaplpnl ealhqaeiev
      361 sehglaadaa mhtenllkip lnakevpvvv kvnrpfllfv edemtqrdll vgtvvnpqvd
//
LOCUS       XP_061015687             414 aa            linear   MAM 02-DEC-2023
DEFINITION  serpin A12 [Dama dama].
ACCESSION   XP_061015687
VERSION     XP_061015687.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159704.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..414
                     /product="serpin A12"
                     /calculated_mol_wt=47024
     Region          45..411
                     /region_name="serpin"
                     /note="SERine Proteinase INhibitors (serpin) family;
                     cl38926"
                     /db_xref="CDD:476815"
     Site            order(364..374,389)
                     /site_type="other"
                     /note="reactive center loop (RCL)"
                     /db_xref="CDD:381000"
     CDS             1..414
                     /gene="SERPINA12"
                     /coded_by="XM_061159704.1:1..1245"
                     /db_xref="GeneID:133068483"
ORIGIN      
        1 mnpllglgll laglltvegl lkpnfspenh eamsqgqggk gkgtaqelak rnadfglklf
       61 kklsfhtpdn niffspwsis mafsmlslga qdstlaeike gfnfrsipek dlhegfhyli
      121 rrlnqrnpdh rlelgnalfi dqkvkpqqkf ltevknmyea dtiptnfqns enaqkqinny
      181 vsqktqgkin nlvknidpgt vmllinciff rarwkhefdp ketkeddfll drnktvkvpm
      241 mfhvgmykvg rddqlsctvl empyqsdfta ifvlpdegkm kqveealgld tfdrwqkllv
      301 rrvadvfvpr ltitsnydlk kmlshlgisk ifeehgdltr isphrnlkvg eavhkatlkm
      361 dekgtegaag sgaqtlpmet pirvkinhrf llmiwetkmn nllffgkivn psgr
//
LOCUS       XP_061015688             421 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: kallistatin [Dama dama].
ACCESSION   XP_061015688
VERSION     XP_061015688.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159705.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts          :: corrected 4 indels
            internal stop codons :: corrected 3 genomic stop codons
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..421
                     /product="LOW QUALITY PROTEIN: kallistatin"
                     /calculated_mol_wt=46855
     Region          43..420
                     /region_name="serpin"
                     /note="SERine Proteinase INhibitors (serpin) family;
                     cl38926"
                     /db_xref="CDD:476815"
     Site            order(370..380,397)
                     /site_type="other"
                     /note="reactive center loop (RCL)"
                     /db_xref="CDD:381000"
     CDS             1..421
                     /gene="SERPINA4"
                     /coded_by="XM_061159705.1:10..1275"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 3 bases in 2 codons;
                     deleted 2 bases in 2 codons; substituted 3 bases at 3
                     genomic stop codons"
                     /db_xref="GeneID:133068484"
ORIGIN      
        1 mqlagfllll lagrlvlsqg qlhpkhygqg qahrphqapg tgegfsslki tpgittfalg
       61 fhhlmasqap ggsiffspls isadxgccpx rsahtaglrs eglgfslmxv sefdshqgfq
      121 nllhtlylpg nrleicmgna lflsnxllpr flkesetfye trlfcsnfxk tvsvtqlinh
      181 ylreetrgki vnlvsklnad ttmmlvnyvy fkalwekpfi pslttphnfy vdevttvkvp
      241 mmlqdiqlhw ylhnrnllcl vlgtdyqgni ttlfilpnrg kmeqveevlt pkiltrwnnl
      301 pwksyfyrkl klylpkfsis gsynldqilp klgitdlffq rvdlsgiteq lnlrvsksfr
      361 kailevgevg tqaavvtsss vtfwsrdnrq alwlnwlflv ifsanaqsil flgkvvnatk
      421 p
//
LOCUS       XP_061015689             404 aa            linear   MAM 02-DEC-2023
DEFINITION  plasma serine protease inhibitor [Dama dama].
ACCESSION   XP_061015689
VERSION     XP_061015689.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159706.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..404
                     /product="plasma serine protease inhibitor"
                     /calculated_mol_wt=45212
     Region          40..404
                     /region_name="serpinA5_PCI"
                     /note="serpin family A member 5, protein C inhibitor;
                     cd19553"
                     /db_xref="CDD:381021"
     Site            order(237,291..293,364..374)
                     /site_type="other"
                     /note="thrombin binding site [polypeptide binding]"
                     /db_xref="CDD:381021"
     Site            order(244,249,281..287,290..293,377)
                     /site_type="other"
                     /note="putative heparin binding site [chemical binding]"
                     /db_xref="CDD:381021"
     Site            355..383
                     /site_type="other"
                     /note="reactive center loop (RCL)"
                     /db_xref="CDD:381021"
     CDS             1..404
                     /gene="SERPINA5"
                     /coded_by="XM_061159706.1:50..1264"
                     /db_xref="GeneID:133068485"
ORIGIN      
        1 mrlclflclm llgprmatlr rpqkkkiqel ppavttappg sgdfvfdlyr tlaaatpdrn
       61 iffsplsisv slamlslgar sntkaqileg lgicpgegse eelhgasqrl lrelqqpqgs
      121 lqlslgnalf tkptlpiqea flgasrtlyl adtfptdfed pegakkkind yvakqtkgki
      181 vdliksldgt qvmvmvnyif fkakwetsfn lkstheqdfy vtpetvvrvp mmkqedqfyy
      241 fldrnlsckv vgvpyqgnat affilphege meqvenglke ktlkkwlrmp mkrrlelylp
      301 kfsiegsyql eevlpklgir diftsdadlt gisnhstiwv semvhkavve vdesgtqaaa
      361 atgtvitfks arlgsqrvvf nrpflmlive nskhilffgk vtrp
//
LOCUS       XP_061015690             409 aa            linear   MAM 02-DEC-2023
DEFINITION  serpin A3-1 [Dama dama].
ACCESSION   XP_061015690
VERSION     XP_061015690.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159707.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..409
                     /product="serpin A3-1"
                     /calculated_mol_wt=45943
     Region          33..409
                     /region_name="serpinA3_A1AC"
                     /note="serpin family A member 3, alpha 1-antichymotrypsin;
                     cd19551"
                     /db_xref="CDD:381019"
     Site            order(359..371,373..375,378..386)
                     /site_type="other"
                     /note="reactive center loop (RCL)"
                     /db_xref="CDD:381019"
     CDS             1..409
                     /gene="LOC133068486"
                     /coded_by="XM_061159707.1:43..1272"
                     /db_xref="GeneID:133068486"
ORIGIN      
        1 mraertsfll vlglllagic svhclpenvm vkdqrrrvdd htlassntdf afslykqlal
       61 enpnknvifs plsvsialaf lslgargstl teileglkfn lteiqekeih qgfqhllqtl
      121 nrpsnqlqls vgnamfvqee lelldkfied arvlysseaf stnfrdpeaa krlineyvkn
      181 ktqgkieelf kylspntvlv lvnyiyfkaq wktpfdpkht qqaefhvsen ktvevpmmsi
      241 gletpyfrde elgctlvelt ytsndsalli lpdegkmqdl eaklnpetlt rwrkslqpsr
      301 ihelylpkfs iksdyvlnki lsqlgikkif adpdlsgitg tgdlvvsqvv hsaaldvdee
      361 gtegaaatgi smertilrit vrfdrpflia ivlkdtqsii flgkvtnps
//
LOCUS       XP_061015691             144 aa            linear   MAM 02-DEC-2023
DEFINITION  AP-4 complex subunit sigma-1-like [Dama dama].
ACCESSION   XP_061015691
VERSION     XP_061015691.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159708.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..144
                     /product="AP-4 complex subunit sigma-1-like"
                     /calculated_mol_wt=16871
     Region          3..140
                     /region_name="AP4_sigma"
                     /note="AP-4 complex subunit sigma; cd14832"
                     /db_xref="CDD:341436"
     Site            order(9..10,15,62..65,88..89,92,97..101)
                     /site_type="other"
                     /note="dileucine motif interface [polypeptide binding]"
                     /db_xref="CDD:341436"
     Site            order(14..17,19..20,45..49,74..79,81..83,86,97,104..107,
                     111..112,115..116,119..130)
                     /site_type="other"
                     /note="putative AP-4 epsilon interface [polypeptide
                     binding]"
                     /db_xref="CDD:341436"
     Site            order(26,30,34,37,51..54)
                     /site_type="other"
                     /note="putative AP-4 mu interface [polypeptide binding]"
                     /db_xref="CDD:341436"
     CDS             1..144
                     /gene="LOC133068487"
                     /coded_by="XM_061159708.1:49..483"
                     /db_xref="GeneID:133068487"
ORIGIN      
        1 mikfflmvnk qgqtrlskyy ehveinkctl letevikscl srsneqcsfi eykdfkliyr
       61 qytalfivvg vndtenemai yefihnfvev lddyfsrvse ldimfnldkv hfildemvln
      121 gcivetnrar ilapllildk msds
//
LOCUS       XP_061015692             418 aa            linear   MAM 02-DEC-2023
DEFINITION  serpin A3-8 [Dama dama].
ACCESSION   XP_061015692
VERSION     XP_061015692.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159709.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..418
                     /product="serpin A3-8"
                     /calculated_mol_wt=46762
     Region          36..416
                     /region_name="serpinA3_A1AC"
                     /note="serpin family A member 3, alpha 1-antichymotrypsin;
                     cd19551"
                     /db_xref="CDD:381019"
     Site            order(365..377,379..382,385..393)
                     /site_type="other"
                     /note="reactive center loop (RCL)"
                     /db_xref="CDD:381019"
     CDS             1..418
                     /gene="LOC133068488"
                     /coded_by="XM_061159709.1:33..1289"
                     /db_xref="GeneID:133068488"
ORIGIN      
        1 mraermstll alvllvaglc ssvhclpenm tpeeqhkgas vddhslassn tnfafslykk
       61 lalenpnknv ifsplsisia laflslgarg stlteilegl kfnltetpet eihqgfqhll
      121 qtlnrpsnql qlsvgnalfv qeelklldkf iedawvlyas qafstnfkds eaakrlindy
      181 vknktqgkie dlfkdldplt kvilvnyiyf kaqwrtpfdp ketyksyfyv senkrvevpm
      241 mstgglvtpy frdeelgctl valtytsnds alfilpdegk mqdleaklnp etltrwresl
      301 yprrihelnl prfsissdyd klenilsqle ikkvftqead lsgitddhkl evsqvvhkav
      361 ldvgeegteg aaatgikvgi tsineiplsf nrpfliavvl kdtqsiiflg kvtnpsqa
//
LOCUS       XP_061015693             416 aa            linear   MAM 02-DEC-2023
DEFINITION  serpin A3-1-like [Dama dama].
ACCESSION   XP_061015693
VERSION     XP_061015693.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159710.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..416
                     /product="serpin A3-1-like"
                     /calculated_mol_wt=46345
     Region          36..414
                     /region_name="serpinA3_A1AC"
                     /note="serpin family A member 3, alpha 1-antichymotrypsin;
                     cd19551"
                     /db_xref="CDD:381019"
     Site            order(363..375,377..381,383..391)
                     /site_type="other"
                     /note="reactive center loop (RCL)"
                     /db_xref="CDD:381019"
     CDS             1..416
                     /gene="LOC133068490"
                     /coded_by="XM_061159710.1:106..1356"
                     /db_xref="GeneID:133068490"
ORIGIN      
        1 mraermstll algllvaglc ssvhcltenv tleephkgas vddhslassn tdfafslykq
       61 lalenpnknv ifsplsvsia lgflslgarg stlteilegl kfnlteiqek eihqgfqhll
      121 qtlnrpsnql qlsmgnamfv qdqlklldkf iedarvlyas qafptefnds naamklindy
      181 vknktqgkie dlfkdldrft kiilvnyiyf kaqwktrfdp khtqqaefhv senktvevpm
      241 msiglktpyf rdeelgctlv eltytsndsa ifilpdegkm qdleaklnre tltrwrgslq
      301 pslidtlylp kfsissdynl philcklgiq kvftakadls gitdvmdlrv sqvvhsavld
      361 vdeegtegaa atgvelspks almtivrfnr pfliavvlkd tqsiiflgkv tnpsqa
//
LOCUS       XP_061015694             416 aa            linear   MAM 02-DEC-2023
DEFINITION  serpin A3-1-like [Dama dama].
ACCESSION   XP_061015694
VERSION     XP_061015694.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159711.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..416
                     /product="serpin A3-1-like"
                     /calculated_mol_wt=46345
     Region          36..414
                     /region_name="serpinA3_A1AC"
                     /note="serpin family A member 3, alpha 1-antichymotrypsin;
                     cd19551"
                     /db_xref="CDD:381019"
     Site            order(363..375,377..381,383..391)
                     /site_type="other"
                     /note="reactive center loop (RCL)"
                     /db_xref="CDD:381019"
     CDS             1..416
                     /gene="LOC133068490"
                     /coded_by="XM_061159711.1:62..1312"
                     /db_xref="GeneID:133068490"
ORIGIN      
        1 mraermstll algllvaglc ssvhcltenv tleephkgas vddhslassn tdfafslykq
       61 lalenpnknv ifsplsvsia lgflslgarg stlteilegl kfnlteiqek eihqgfqhll
      121 qtlnrpsnql qlsmgnamfv qdqlklldkf iedarvlyas qafptefnds naamklindy
      181 vknktqgkie dlfkdldrft kiilvnyiyf kaqwktrfdp khtqqaefhv senktvevpm
      241 msiglktpyf rdeelgctlv eltytsndsa ifilpdegkm qdleaklnre tltrwrgslq
      301 pslidtlylp kfsissdynl philcklgiq kvftakadls gitdvmdlrv sqvvhsavld
      361 vdeegtegaa atgvelspks almtivrfnr pfliavvlkd tqsiiflgkv tnpsqa
//
LOCUS       XP_061015695             257 aa            linear   MAM 02-DEC-2023
DEFINITION  homeobox protein goosecoid [Dama dama].
ACCESSION   XP_061015695
VERSION     XP_061015695.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159712.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..257
                     /product="homeobox protein goosecoid"
                     /calculated_mol_wt=27853
     Region          162..218
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..257
                     /gene="GSC"
                     /coded_by="XM_061159712.1:1..774"
                     /db_xref="GeneID:133068491"
ORIGIN      
        1 mpasmfsidn ilaarprckd svppvassaa apvvfpalhg dslyggaggg assdygafyp
       61 rpvapggagl paavggsrlg ysnyfygqlh vqaapvgpac cgavpplgaq qcscvptppg
      121 yegpgsvlvs pvphqmmpym nvgtlsrtel qllnqlhcrr krrhrtiftd eqlealenlf
      181 qetkypdvgt reqlarkvhl reekvevwfk nrrakwrrqk rssseesena ekwnktsska
      241 spekreeegk sdldsds
//
LOCUS       XP_061015696              65 aa            linear   MAM 02-DEC-2023
DEFINITION  protein TUNAR isoform X1 [Dama dama].
ACCESSION   XP_061015696
VERSION     XP_061015696.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159713.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..65
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..65
                     /product="protein TUNAR isoform X1"
                     /calculated_mol_wt=7134
     CDS             1..65
                     /gene="TUNAR"
                     /coded_by="XM_061159713.1:76..273"
                     /db_xref="GeneID:133068492"
ORIGIN      
        1 mrcwvslgrk iktfatkmvi tggndedrgg qekeskeesv lamlgiigti lnliviifvy
       61 iyttl
//
LOCUS       XP_061015697              48 aa            linear   MAM 02-DEC-2023
DEFINITION  protein TUNAR isoform X2 [Dama dama].
ACCESSION   XP_061015697
VERSION     XP_061015697.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159714.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..48
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..48
                     /product="protein TUNAR isoform X2"
                     /calculated_mol_wt=5127
     CDS             1..48
                     /gene="TUNAR"
                     /coded_by="XM_061159714.1:169..315"
                     /db_xref="GeneID:133068492"
ORIGIN      
        1 mvitggnded rggqekeske esvlamlgii gtilnlivii fvyiyttl
//
LOCUS       XP_061015698             724 aa            linear   MAM 02-DEC-2023
DEFINITION  adenylate kinase 7 isoform X1 [Dama dama].
ACCESSION   XP_061015698
VERSION     XP_061015698.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159715.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..724
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..724
                     /product="adenylate kinase 7 isoform X1"
                     /calculated_mol_wt=82804
     Region          71..297
                     /region_name="WcaG"
                     /note="Nucleoside-diphosphate-sugar epimerase [Cell
                     wall/membrane/envelope biogenesis]; COG0451"
                     /db_xref="CDD:440220"
     Region          369..>549
                     /region_name="ADK"
                     /note="Adenylate kinase (ADK) catalyzes the reversible
                     phosphoryl transfer from adenosine triphosphates (ATP) to
                     adenosine monophosphates (AMP) and to yield adenosine
                     diphosphates (ADP). This enzyme is required for the
                     biosynthesis of ADP and is essential for...; cd01428"
                     /db_xref="CDD:238713"
     Site            order(398,403,456,482..483,485..486,490)
                     /site_type="other"
                     /note="AMP-binding site [chemical binding]"
                     /db_xref="CDD:238713"
     Region          680..720
                     /region_name="DD_AK7"
                     /note="dimerization/docking (D/D) domain found in
                     adenylate kinase 7 and similar proteins; cd22967"
                     /db_xref="CDD:438536"
     CDS             1..724
                     /gene="AK7"
                     /coded_by="XM_061159715.1:1..2175"
                     /db_xref="GeneID:133068496"
ORIGIN      
        1 mgeeeegaap aekairiqrv finlldsyss rnigkflsnc vvgasleeit eeeeeddetk
       61 sampeasmak lkegtfqivg tlskldvprp efavetycgi sqedlllrll ecdvivynit
      121 enpqqaeeai wavsalnees shfekrkvfi lvstvmtwar skpldpddse vpfteedyrr
      181 rkqhpnfldh inaekmvlkf gknvrkftty vvaaglqygm eggilhaffk lawlgevpal
      241 pvfgdgtnvi paihildlag viqniidhvp klhylvavde svhtledfvk ciskstgpgk
      301 iqkipkenaf ltkdltqeni dhllvnlrme alfvkenfni rwfaqagfve ninsilkeyk
      361 qsrrllpiki cilgppavgk ssiaevlaky yklhhiklkd viseaiakle aiitpkdvme
      421 ggeeegeeee eednvedaqe llegikesmd qnaghledqy iirfmkeklk smpcrnqgyi
      481 ldgfpktydq akdlfsqede eeeeegrgkm fpydkliipe fvcsldasde flkervmnlp
      541 esvvtgthys qdrflralsn yrdintedet vlnyfdelei hpihidvgrl edaqnrlaik
      601 qlikevgepr nygltdeeka eeerkaaeer lakeameeae rehkeaveta ekiarweewn
      661 kqleevkree relleaqsip lrnylmtyvm ptlmqglnec ckvrpddpvd flaeylfknn
      721 petq
//
LOCUS       XP_061015699             701 aa            linear   MAM 02-DEC-2023
DEFINITION  adenylate kinase 7 isoform X2 [Dama dama].
ACCESSION   XP_061015699
VERSION     XP_061015699.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159716.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..701
                     /product="adenylate kinase 7 isoform X2"
                     /calculated_mol_wt=80039
     Region          71..297
                     /region_name="WcaG"
                     /note="Nucleoside-diphosphate-sugar epimerase [Cell
                     wall/membrane/envelope biogenesis]; COG0451"
                     /db_xref="CDD:440220"
     Region          369..>526
                     /region_name="ADK"
                     /note="Adenylate kinase (ADK) catalyzes the reversible
                     phosphoryl transfer from adenosine triphosphates (ATP) to
                     adenosine monophosphates (AMP) and to yield adenosine
                     diphosphates (ADP). This enzyme is required for the
                     biosynthesis of ADP and is essential for...; cd01428"
                     /db_xref="CDD:238713"
     Site            order(398,403,456,482..483,485..486,490)
                     /site_type="other"
                     /note="AMP-binding site [chemical binding]"
                     /db_xref="CDD:238713"
     Region          657..697
                     /region_name="DD_AK7"
                     /note="dimerization/docking (D/D) domain found in
                     adenylate kinase 7 and similar proteins; cd22967"
                     /db_xref="CDD:438536"
     CDS             1..701
                     /gene="AK7"
                     /coded_by="XM_061159716.1:1..2106"
                     /db_xref="GeneID:133068496"
ORIGIN      
        1 mgeeeegaap aekairiqrv finlldsyss rnigkflsnc vvgasleeit eeeeeddetk
       61 sampeasmak lkegtfqivg tlskldvprp efavetycgi sqedlllrll ecdvivynit
      121 enpqqaeeai wavsalnees shfekrkvfi lvstvmtwar skpldpddse vpfteedyrr
      181 rkqhpnfldh inaekmvlkf gknvrkftty vvaaglqygm eggilhaffk lawlgevpal
      241 pvfgdgtnvi paihildlag viqniidhvp klhylvavde svhtledfvk ciskstgpgk
      301 iqkipkenaf ltkdltqeni dhllvnlrme alfvkenfni rwfaqagfve ninsilkeyk
      361 qsrrllpiki cilgppavgk ssiaevlaky yklhhiklkd viseaiakle aiitpkdvme
      421 ggeeegeeee eednvedaqe llegikesmd qnaghledqy iirfmkeklk smpcrnqgyi
      481 ldgfpktydq akdlfsqfvc sldasdeflk ervmnlpesv vtgthysqdr flralsnyrd
      541 intedetvln yfdeleihpi hidvgrleda qnrlaikqli kevgeprnyg ltdeekaeee
      601 rkaaeerlak eameeaereh keavetaeki arweewnkql eevkreerel leaqsiplrn
      661 ylmtyvmptl mqglnecckv rpddpvdfla eylfknnpet q
//
LOCUS       XP_061015700             658 aa            linear   MAM 02-DEC-2023
DEFINITION  adenylate kinase 7 isoform X3 [Dama dama].
ACCESSION   XP_061015700
VERSION     XP_061015700.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159717.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..658
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..658
                     /product="adenylate kinase 7 isoform X3"
                     /calculated_mol_wt=74932
     Region          71..297
                     /region_name="WcaG"
                     /note="Nucleoside-diphosphate-sugar epimerase [Cell
                     wall/membrane/envelope biogenesis]; COG0451"
                     /db_xref="CDD:440220"
     Region          369..>483
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Site            order(374,379..382)
                     /site_type="active"
                     /db_xref="CDD:238977"
     Region          614..654
                     /region_name="DD_AK7"
                     /note="dimerization/docking (D/D) domain found in
                     adenylate kinase 7 and similar proteins; cd22967"
                     /db_xref="CDD:438536"
     CDS             1..658
                     /gene="AK7"
                     /coded_by="XM_061159717.1:1..1977"
                     /db_xref="GeneID:133068496"
ORIGIN      
        1 mgeeeegaap aekairiqrv finlldsyss rnigkflsnc vvgasleeit eeeeeddetk
       61 sampeasmak lkegtfqivg tlskldvprp efavetycgi sqedlllrll ecdvivynit
      121 enpqqaeeai wavsalnees shfekrkvfi lvstvmtwar skpldpddse vpfteedyrr
      181 rkqhpnfldh inaekmvlkf gknvrkftty vvaaglqygm eggilhaffk lawlgevpal
      241 pvfgdgtnvi paihildlag viqniidhvp klhylvavde svhtledfvk ciskstgpgk
      301 iqkipkenaf ltkdltqeni dhllvnlrme alfvkenfni rwfaqagfve ninsilkeyk
      361 qsrrllpiki cilgppavgk ssiaevlaky yklhhiklkd viseaiakle aiitpkdvme
      421 ggeeegeeee eednvedaqe llegikesmd qnaefvcsld asdeflkerv mnlpesvvtg
      481 thysqdrflr alsnyrdint edetvlnyfd eleihpihid vgrledaqnr laikqlikev
      541 geprnygltd eekaeeerka aeerlakeam eeaerehkea vetaekiarw eewnkqleev
      601 kreerellea qsiplrnylm tyvmptlmqg lnecckvrpd dpvdflaeyl fknnpetq
//
LOCUS       XP_061015701             390 aa            linear   MAM 02-DEC-2023
DEFINITION  ceramide synthase 3 [Dama dama].
ACCESSION   XP_061015701
VERSION     XP_061015701.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159718.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..390
                     /product="ceramide synthase 3"
                     /calculated_mol_wt=46642
     Region          <83..126
                     /region_name="homeodomain"
                     /note="Homeodomain; DNA binding domains involved in the
                     transcriptional regulation of key eukaryotic developmental
                     processes; may bind to DNA as monomers or as homo- and/or
                     heterodimers, in a sequence-specific manner; cd00086"
                     /db_xref="CDD:238039"
     Region          131..331
                     /region_name="TLC"
                     /note="TRAM, LAG1 and CLN8 homology domains; smart00724"
                     /db_xref="CDD:214789"
     CDS             1..390
                     /gene="CERS3"
                     /coded_by="XM_061159718.1:1..1173"
                     /db_xref="GeneID:133068501"
ORIGIN      
        1 mfqtfkewfw lerfwlppti kwsdledhdg lifvkpshly mtipyafvli iirhffqkfi
       61 asplaktfgi keevqkkitp ntvlenffkh strkpsqtdi yglakkcnlt erqverwfrs
      121 rqnqdrpcrm kkfqeacwrf tfyliitiag iaflydkpwv ydlwevwngy prqpllpsqy
      181 wyyilemsfy wsllfslgsd vkrkdflahv ihhlaavslm sfswcanyir sgtlvmivhd
      241 vadiwlesak mfsyagwkqt cntlffifst vflisrliif pfwilyctli lplhylqpff
      301 syiflnlqlm vlqvlnlyws yfilkmlkrs iftksirdvr sdsegeyeee edeeeeeeek
      361 eeatggketd hlknslgadr hlipngqhgc
//
LOCUS       XP_061015702             501 aa            linear   MAM 02-DEC-2023
DEFINITION  cholesterol 24-hydroxylase [Dama dama].
ACCESSION   XP_061015702
VERSION     XP_061015702.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159719.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..501
                     /product="cholesterol 24-hydroxylase"
                     /calculated_mol_wt=56855
     Region          62..485
                     /region_name="CYP46A1-like"
                     /note="cytochrome P450 family 46, subfamily A, polypeptide
                     1, also called cholesterol 24-hydroxylase, and similar
                     cytochrome P450s; cd20613"
                     /db_xref="CDD:410706"
     Site            order(81..82,109..112,122,127,223,226,227,303,368..370,
                     372,475..476)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410706"
     Site            order(105,110,126..127,135,139,146,193,300,303..304,
                     307..308,311,368,371,430..432,436..440,443..444,447)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410706"
     CDS             1..501
                     /gene="LOC133068504"
                     /coded_by="XM_061159719.1:1..1506"
                     /db_xref="GeneID:133068504"
ORIGIN      
        1 mshgllmllg savlvvfglc ctfvhrarsr yehipgpprp sfllghlpyf wkkdevcgrv
       61 lqdvfldwak kygpvvrvnv fhktsvivts pesvkkflms tkynkdskmy haiqtvfger
      121 lfgqglvsec dyerwhkqrr vmdlafsrss lvglmgtfne kaeqlveile aqadgqtpvs
      181 mqdmltcatm dilakaafgm etsmllgaqk plsrkvklil egisasrntl akfmpgkwkq
      241 lretresvrf lrqvgkewvq rrrealqrge dvpadiltqi lkaeegaqdd eilldnfvtf
      301 fiaghetsan hlaftvmels rqpeilarlq aevdevigsk rhldcedlgr lqylsqvlke
      361 slrlyppawg tfrlleeetl idgvrvpgnt pllfstyvmg rmdtyfedpl tfnpdrfgpk
      421 apkpkftyfp fslgprscig qqfaqmevkv vmakllqrle frlvpgqrfg lqeqatlkpl
      481 dpvictlqpr gwqpappppp c
//
LOCUS       XP_061015703            1235 aa            linear   MAM 02-DEC-2023
DEFINITION  A disintegrin and metalloproteinase with thrombospondin motifs 17
            [Dama dama].
ACCESSION   XP_061015703
VERSION     XP_061015703.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159720.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 9% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1235
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1235
                     /product="A disintegrin and metalloproteinase with
                     thrombospondin motifs 17"
                     /calculated_mol_wt=135209
     Region          <197..292
                     /region_name="Pep_M12B_propep"
                     /note="Reprolysin family propeptide; pfam01562"
                     /db_xref="CDD:460254"
     Region          343..560
                     /region_name="ZnMc_ADAMTS_like"
                     /note="Zinc-dependent metalloprotease, ADAMTS_like
                     subgroup. ADAMs (A Disintegrin And Metalloprotease) are
                     glycoproteins, which play roles in cell signaling, cell
                     fusion, and cell-cell interactions. This particular
                     subfamily represents domain architectures that...;
                     cd04273"
                     /db_xref="CDD:239801"
     Site            order(500..501,504,510)
                     /site_type="active"
                     /db_xref="CDD:239801"
     Region          577..644
                     /region_name="ADAMTS_CR_2"
                     /note="ADAMTS cysteine-rich domain 2; pfam17771"
                     /db_xref="CDD:465496"
     Region          657..709
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          <741..810
                     /region_name="ADAMTS_CR_3"
                     /note="ADAMTS cysteine-rich domain; pfam19236"
                     /db_xref="CDD:437068"
     Region          812..921
                     /region_name="ADAMTS_spacer1"
                     /note="ADAM-TS Spacer 1; pfam05986"
                     /db_xref="CDD:461796"
     Region          947..999
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1003..1059
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1063..1105
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1114..1166
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     CDS             1..1235
                     /gene="ADAMTS17"
                     /coded_by="XM_061159720.1:1..3708"
                     /db_xref="GeneID:133068505"
ORIGIN      
        1 mcdgallppl alpllllllw gldpgtgsap lppplrprlp rppsacpprr pppacaaapr
       61 rpaadsrgve garaaagglg sgrppgvrlp raprprrgpg grvrsgagpg rrrwparrcp
      121 gegrdegavs gprwrwmpga gppvgdaaad vevvlprrvr ledvhlpplp gapgprrrrr
      181 prappaapra rlgeralllh lpafgrdlyl qmrrdlrfls ggfeveeaga ggrrgrsael
      241 cfysgsvlgh pgsivslsac gaagglvgli qlgqeqvliq plnssqgqeh lvsrkwsltp
      301 spspetqmpg qlckvltekk srrgrpsrdg rrrrnairlt sehtvetlvv adadmvqyhg
      361 aeaaqrfilt vmnmvynmfq hqslgikvni qvtklvllrq rpaklsighh gerslesfch
      421 wqneeyggar ylgnnqvpgg kddtppvdaa vfvtrtdfcv hkdepcdtvg iaylggvcsa
      481 krkcvlaedn glnlaftiah elghnlgmnh dddhsscagr shimsgewvk grspsdlsws
      541 scsrddlenf lkskvstcll vtdprsqhav rlphklpgmh ysaneqcqil fgtnatfcrn
      601 mehlmcaglw clvegdtsck tkldppldgt ecgadkwcra gecvsktpip ehvdgdwspw
      661 gawsmcsrtc gtgarfrqrk cdnpppgpgg thclgasveh tvcenlpcpk glpsfrdqqc
      721 qthdrlsskk kglltavvvd dkpcelycsp lgkespllva drvldgtpcg pyetdlcvhg
      781 rcqkigcdgi igsaakedrc gvcsgdgktc rvvkgdfsht rgtgyieaai ipagarrirv
      841 vedkpahsfl alkdsskrsi nsdwkielpg efqiagttvr yvrrglweki sakgptkmpl
      901 hlmvllfhdq nygihyeyti pvnyttenqs epekpqdslf iwthsgwegc svqcgggerr
      961 sivsctrivn ktttlvndsd cpqasrpepq vrrcnlhpcq srwvagpwsp csatcekgiq
     1021 hrevtcvyql qngthvatrp lycpvprpsp vqscegqdcl siweasewsq csatcgkgtq
     1081 krtvtctnsq gkcdastrpr aeepcedysg cyewktgsws kcsstcgkgl qsrvvqcmhk
     1141 vtgrhgnecp alakpaaykq chqevcndki nvntitsprl aaltykctrd qwtvycrvir
     1201 eknlcqdmrw yqrccqtcrd fyankmrqpp pppss
//
LOCUS       XP_061015704             307 aa            linear   MAM 02-DEC-2023
DEFINITION  solute carrier family 25 member 47 [Dama dama].
ACCESSION   XP_061015704
VERSION     XP_061015704.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159721.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..307
                     /product="solute carrier family 25 member 47"
                     /calculated_mol_wt=32936
     Region          <18..77
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          100..207
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          220..301
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     CDS             1..307
                     /gene="SLC25A47"
                     /coded_by="XM_061159721.1:1..924"
                     /db_xref="GeneID:133068506"
ORIGIN      
        1 mdfvagavgg vcgvavgypl dtvkvriqte pkytgiwdcv rdtyhreqlr gfyrglslpv
       61 ctvslvssvs fgtyrhclah icrvrygsad akpaktditl sgfasglvrv fltaptevak
      121 vrlqtqaqqr rrpsasgpla tpptcpeppa glpagpkyrg plhclatvar eeglrglykg
      181 ssallfrdgh sfatyflsya ilcewltpag hsrpdvsgvl vaggcagala wavatpmdvi
      241 karlqadgrg hcryqgllhc vltsvreegp rvlfkgllln ccrafpvnmv vfvayeavlr
      301 ltqgllt
//
LOCUS       XP_061015705             539 aa            linear   MAM 02-DEC-2023
DEFINITION  brain-enriched guanylate kinase-associated protein [Dama dama].
ACCESSION   XP_061015705
VERSION     XP_061015705.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159722.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..539
                     /product="brain-enriched guanylate kinase-associated
                     protein"
                     /calculated_mol_wt=57491
     CDS             1..539
                     /gene="BEGAIN"
                     /coded_by="XM_061159722.1:220..1839"
                     /db_xref="GeneID:133068507"
ORIGIN      
        1 malqrinqel edklfrmgqh yeeekralsh eivalnshll eakvtidkls ednelyrkdc
       61 slaaqllqcs qtygrghkma elpaefqerm nlhaekpgcs lpaplcrpay adsvppcvla
      121 kvlekpdpgs lsshlseasa qdlgfpegle kpgprppykg diycsdtaly cpeerrrdrr
      181 psvegpgsdv gflqaqnstd staeeeeeee easeagaaay pasyrheafg gyaaslptss
      241 syssfsatse ekehaqastl tasqqaiyln srdelfgrkp pvaygsspry aaaaaavatp
      301 leaavapgfp rtvspfpaep frfplspgpq palmppnlwn lrakpgsarl vagagrgqwr
      361 plsvddigay pfpaaaaapa pslaspsgfn dryfgarggp genaegrasp lyasykadsf
      421 segddlsqgh lveprylraa gdlslspgrs adplpsyaas egdrerlgvq llgasgspep
      481 elslrssrds lepssmeasp emhpgarlsp qpafpragss glsrkdsltk aqlygtlln
//
LOCUS       XP_061015706             383 aa            linear   MAM 02-DEC-2023
DEFINITION  protein delta homolog 1 isoform X1 [Dama dama].
ACCESSION   XP_061015706
VERSION     XP_061015706.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159723.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..383
                     /product="protein delta homolog 1 isoform X1"
                     /calculated_mol_wt=41172
     Region          88..125
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(88,91,105)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          135..168
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          175..205
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     CDS             1..383
                     /gene="DLK1"
                     /coded_by="XM_061159723.1:66..1217"
                     /db_xref="GeneID:133068508"
ORIGIN      
        1 mtataallpv lllllafgrs ahgaecfpac hpengfcddd svcrcqpgwq gplcdqcvtf
       61 pgcmhglcve pwqcickdgw dghlcdldir actstpcann gtclnledgq yecscapgfs
      121 gkdcqkmdgp cvvngspcqh ggscvddegq aphaaclcpp gfsgnfceim tnscspnpce
      181 nqgictdigg dfrcrcpagf mdktcsrpvn tctsepclng gtclqhsqvr feclctpafa
      241 gprcgrkraa gppqvtrvps gygltyrltp gvhelpvqqp ehrvlkvsmk elnkstplls
      301 egqaicftil gvltslvilg tlgivflnkc eawvsnlryn hmlrkkknll lhynsgeela
      361 vnivfpekid mttftkeage eei
//
LOCUS       XP_061015707             310 aa            linear   MAM 02-DEC-2023
DEFINITION  protein delta homolog 1 isoform X2 [Dama dama].
ACCESSION   XP_061015707
VERSION     XP_061015707.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159724.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..310
                     /product="protein delta homolog 1 isoform X2"
                     /calculated_mol_wt=33132
     Region          88..125
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(88,91,105)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          175..205
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     CDS             1..310
                     /gene="DLK1"
                     /coded_by="XM_061159724.1:66..998"
                     /db_xref="GeneID:133068508"
ORIGIN      
        1 mtataallpv lllllafgrs ahgaecfpac hpengfcddd svcrcqpgwq gplcdqcvtf
       61 pgcmhglcve pwqcickdgw dghlcdldir actstpcann gtclnledgq yecscapgfs
      121 gkdcqkmdgp cvvngspcqh ggscvddegq aphaaclcpp gfsgnfceim tnscspnpce
      181 nqgictdigg dfrcrcpagf mdktcsrpvn tctsepclng gtclqhsqgq aicftilgvl
      241 tslvilgtlg ivflnkceaw vsnlrynhml rkkknlllhy nsgeelavni vfpekidmtt
      301 ftkeageeei
//
LOCUS       XP_061015708             308 aa            linear   MAM 02-DEC-2023
DEFINITION  protein delta homolog 1 isoform X3 [Dama dama].
ACCESSION   XP_061015708
VERSION     XP_061015708.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159725.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..308
                     /product="protein delta homolog 1 isoform X3"
                     /calculated_mol_wt=32947
     Region          88..125
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(88,91,105)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          175..205
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     CDS             1..308
                     /gene="DLK1"
                     /coded_by="XM_061159725.1:66..992"
                     /db_xref="GeneID:133068508"
ORIGIN      
        1 mtataallpv lllllafgrs ahgaecfpac hpengfcddd svcrcqpgwq gplcdqcvtf
       61 pgcmhglcve pwqcickdgw dghlcdldir actstpcann gtclnledgq yecscapgfs
      121 gkdcqkmdgp cvvngspcqh ggscvddegq aphaaclcpp gfsgnfceim tnscspnpce
      181 nqgictdigg dfrcrcpagf mdktcsrpvn tctsepclng gtclqhsqai cftilgvlts
      241 lvilgtlgiv flnkceawvs nlrynhmlrk kknlllhyns geelavnivf pekidmttft
      301 keageeei
//
LOCUS       XP_061015709             304 aa            linear   MAM 02-DEC-2023
DEFINITION  thyroxine 5-deiodinase [Dama dama].
ACCESSION   XP_061015709
VERSION     XP_061015709.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159726.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..304
                     /product="thyroxine 5-deiodinase"
                     /calculated_mol_wt=33936
     Region          39..293
                     /region_name="T4_deiodinase"
                     /note="Iodothyronine deiodinase; pfam00837"
                     /db_xref="CDD:279210"
     CDS             1..304
                     /gene="DIO3"
                     /coded_by="XM_061159726.1:1..915"
                     /db_xref="GeneID:133068512"
ORIGIN      
        1 mprqaaprwv vgegrgsqga lggaatmlrs lllhslrlca qtasclalfp rflgtafvlw
       61 lldflcirkh llgrrrrgqp etevelnsdg eevppddppv cvsddnrlct laslravwhg
      121 qkldffkqah eggpapnsev vlpdgfqnqh ildyargnrp lvlnfgsctu ppfmarmsaf
      181 qrlvtkyqrd vdfliiyiee ahpsdgwvtt dspysipqhr sledrvsaar vlqqgapeca
      241 lvldtmtnss ssaygayfer lyiiqsgtvm yqggrgpdgy qvselrswle rydeqlhgpr
      301 prrv
//
LOCUS       XP_061015711             217 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133068515 [Dama dama].
ACCESSION   XP_061015711
VERSION     XP_061015711.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159728.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..217
                     /product="uncharacterized protein LOC133068515"
                     /calculated_mol_wt=23633
     CDS             1..217
                     /gene="LOC133068515"
                     /coded_by="XM_061159728.1:1..654"
                     /db_xref="GeneID:133068515"
ORIGIN      
        1 maglrnghrs ciraaftast ragfqkrqrn rlhrlkashr knhldfvegi wrelldpyda
       61 dweearghas chfngcslga vncdgplhtl ksrgpgdvsl edplsanlpl lvltatgwap
      121 aapegsdvdm qpaeagglea rgqmarlpgp pedtgmmeed rgspeagrpq grargsrppp
      181 rlgterdrgp klilskrkle lllaepeksk rkkqyva
//
LOCUS       XP_061015712             360 aa            linear   MAM 02-DEC-2023
DEFINITION  MAPK/MAK/MRK overlapping kinase isoform X1 [Dama dama].
ACCESSION   XP_061015712
VERSION     XP_061015712.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159729.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..360
                     /product="MAPK/MAK/MRK overlapping kinase isoform X1"
                     /calculated_mol_wt=41124
     Region          4..236
                     /region_name="STKc_MOK"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     MAPK/MAK/MRK Overlapping Kinase; cd07831"
                     /db_xref="CDD:270825"
     Site            order(10..14,18,31,33,49,64,82..85,88,90..91,128,130,
                     132..133,135,145,148,159,161..164,166,204)
                     /site_type="active"
                     /db_xref="CDD:270825"
     Site            order(10..14,18,31,33,64,82..85,88,128,130,132..133,135,
                     145)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270825"
     Site            order(49,90,128,130,148,159,161..164,166,204)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270825"
     Site            144..166
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270825"
     CDS             1..360
                     /gene="MOK"
                     /coded_by="XM_061159729.1:167..1249"
                     /db_xref="GeneID:133068516"
ORIGIN      
        1 mknykaigki gegtfsevmk mqnlrdgnyy ackqmkqhfe sieqvnnlre iqalrrlnph
       61 pniltlhevv fdrksgslal icelmemniy elirgrrhpl sekkithymy qlcksldhmh
      121 rngifhrdvk penilvkqdv lklgdfgscr svysrqpyte yistrwyrap eclltdgfyg
      181 fkmdlwsagc vlyemaslqp lfpganeldq isrihdvmgt paektltkfk qaaekqalar
      241 arrkapapfp erptapelns twqtaqegrk qkqpsrpeen hprrqgpayl melprvklsg
      301 aatlasyssp alqsvfapkv pllrplkcag aaqktdtqkd ikpslkqyrl ptierrgggy
//
LOCUS       XP_061015713             418 aa            linear   MAM 02-DEC-2023
DEFINITION  MAPK/MAK/MRK overlapping kinase isoform X2 [Dama dama].
ACCESSION   XP_061015713
VERSION     XP_061015713.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159730.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..418
                     /product="MAPK/MAK/MRK overlapping kinase isoform X2"
                     /calculated_mol_wt=47611
     Region          4..285
                     /region_name="STKc_MOK"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     MAPK/MAK/MRK Overlapping Kinase; cd07831"
                     /db_xref="CDD:270825"
     Site            order(10..14,18,31,33,49,64,82..85,88,90..91,128,130,
                     132..133,135,145,148,159,161..164,166,204)
                     /site_type="active"
                     /db_xref="CDD:270825"
     Site            order(10..14,18,31,33,64,82..85,88,128,130,132..133,135,
                     145)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270825"
     Site            order(49,90,128,130,148,159,161..164,166,204)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270825"
     Site            144..166
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270825"
     CDS             1..418
                     /gene="MOK"
                     /coded_by="XM_061159730.1:175..1431"
                     /db_xref="GeneID:133068516"
ORIGIN      
        1 mknykaigki gegtfsevmk mqnlrdgnyy ackqmkqhfe sieqvnnlre iqalrrlnph
       61 pniltlhevv fdrksgslal icelmemniy elirgrrhpl sekkithymy qlcksldhmh
      121 rngifhrdvk penilvkqdv lklgdfgscr svysrqpyte yistrwyrap eclltdgfyg
      181 fkmdlwsagc vlyemaslqp lfpganeldq isrihdvmgt paektltkfk qsramsfdfp
      241 fkkgsgipll ttslspqcls llhamvaydp deritahqal qhpyfqgqra aekqalarar
      301 rkapapfper ptapelnstw qtaqegrkqk qpsrpeenhp rrqgpaylme lprvklsgaa
      361 tlasysspal qsvfapkvpl lrplkcagaa qktdtqkdik pslkqyrlpt ierrgggy
//
LOCUS       XP_061015714              79 aa            linear   MAM 02-DEC-2023
DEFINITION  reactive oxygen species modulator 1-like [Dama dama].
ACCESSION   XP_061015714
VERSION     XP_061015714.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159731.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..79
                     /product="reactive oxygen species modulator 1-like"
                     /calculated_mol_wt=8110
     Region          14..79
                     /region_name="Romo1"
                     /note="Reactive mitochondrial oxygen species modulator 1;
                     pfam10247"
                     /db_xref="CDD:431168"
     CDS             1..79
                     /gene="LOC133068519"
                     /coded_by="XM_061159731.1:34..273"
                     /db_xref="GeneID:133068519"
ORIGIN      
        1 mpvavgpygq sqpscfdrvk mgflmgcamg maagalfgtf sclrigmrgr elmggigktm
       61 mqsggifgtf maigmgirc
//
LOCUS       XP_061015715             624 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133068521 isoform X1 [Dama dama].
ACCESSION   XP_061015715
VERSION     XP_061015715.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159732.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..624
                     /product="uncharacterized protein LOC133068521 isoform X1"
                     /calculated_mol_wt=70098
     CDS             1..624
                     /gene="LOC133068521"
                     /coded_by="XM_061159732.1:142..2016"
                     /db_xref="GeneID:133068521"
ORIGIN      
        1 mgrrkkksre eregadrkfk gqprnkrwki lawfrrhryp qtaavplaes segfsqlvle
       61 gcfleacrsi sslaedgqdr gsqyqivaqg mwqvireale ggggsrelqr klrsvaaave
      121 wargssrelg gdlaswdcql rtqlrndaen rvppsprdrv plspgdqlgg ylaelaeavd
      181 cgldprragw lgarlsatyr ecfqevlldr lsvllirsgd pdscrelytw arktlfgqla
      241 ktpepaatrk lldplmfvtw msqvqsrlve liqkelekql edvltcdqke satsscqafl
      301 kifqllkgti dsvqdigppi tsrvqamvln tfleflkryr gegaphflqq qagagpapql
      361 hvlqnccvlr ktwqdlgqar tpladvvlrt isaiedrsqd dlvsvvrsqy rsllghhfgr
      421 edeelaqalr slrrglehyp tllppptyks lvqslykavf teylqalvth lkrlkprkwe
      481 dhrgqvetdf qelheafgrq eglgdgapgq eafmevfqls gkqgnpclde wldsfrdrfp
      541 dyvrreskar dgqgfaqgpp qagagpslvs llpdteiypa gpsewpspdp fpvtrtpgtq
      601 gqseeselrs ccpcswgflm pftm
//
LOCUS       XP_061015716             624 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133068521 isoform X1 [Dama dama].
ACCESSION   XP_061015716
VERSION     XP_061015716.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159733.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..624
                     /product="uncharacterized protein LOC133068521 isoform X1"
                     /calculated_mol_wt=70098
     CDS             1..624
                     /gene="LOC133068521"
                     /coded_by="XM_061159733.1:142..2016"
                     /db_xref="GeneID:133068521"
ORIGIN      
        1 mgrrkkksre eregadrkfk gqprnkrwki lawfrrhryp qtaavplaes segfsqlvle
       61 gcfleacrsi sslaedgqdr gsqyqivaqg mwqvireale ggggsrelqr klrsvaaave
      121 wargssrelg gdlaswdcql rtqlrndaen rvppsprdrv plspgdqlgg ylaelaeavd
      181 cgldprragw lgarlsatyr ecfqevlldr lsvllirsgd pdscrelytw arktlfgqla
      241 ktpepaatrk lldplmfvtw msqvqsrlve liqkelekql edvltcdqke satsscqafl
      301 kifqllkgti dsvqdigppi tsrvqamvln tfleflkryr gegaphflqq qagagpapql
      361 hvlqnccvlr ktwqdlgqar tpladvvlrt isaiedrsqd dlvsvvrsqy rsllghhfgr
      421 edeelaqalr slrrglehyp tllppptyks lvqslykavf teylqalvth lkrlkprkwe
      481 dhrgqvetdf qelheafgrq eglgdgapgq eafmevfqls gkqgnpclde wldsfrdrfp
      541 dyvrreskar dgqgfaqgpp qagagpslvs llpdteiypa gpsewpspdp fpvtrtpgtq
      601 gqseeselrs ccpcswgflm pftm
//
LOCUS       XP_061015717             624 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133068521 isoform X1 [Dama dama].
ACCESSION   XP_061015717
VERSION     XP_061015717.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159734.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..624
                     /product="uncharacterized protein LOC133068521 isoform X1"
                     /calculated_mol_wt=70098
     CDS             1..624
                     /gene="LOC133068521"
                     /coded_by="XM_061159734.1:142..2016"
                     /db_xref="GeneID:133068521"
ORIGIN      
        1 mgrrkkksre eregadrkfk gqprnkrwki lawfrrhryp qtaavplaes segfsqlvle
       61 gcfleacrsi sslaedgqdr gsqyqivaqg mwqvireale ggggsrelqr klrsvaaave
      121 wargssrelg gdlaswdcql rtqlrndaen rvppsprdrv plspgdqlgg ylaelaeavd
      181 cgldprragw lgarlsatyr ecfqevlldr lsvllirsgd pdscrelytw arktlfgqla
      241 ktpepaatrk lldplmfvtw msqvqsrlve liqkelekql edvltcdqke satsscqafl
      301 kifqllkgti dsvqdigppi tsrvqamvln tfleflkryr gegaphflqq qagagpapql
      361 hvlqnccvlr ktwqdlgqar tpladvvlrt isaiedrsqd dlvsvvrsqy rsllghhfgr
      421 edeelaqalr slrrglehyp tllppptyks lvqslykavf teylqalvth lkrlkprkwe
      481 dhrgqvetdf qelheafgrq eglgdgapgq eafmevfqls gkqgnpclde wldsfrdrfp
      541 dyvrreskar dgqgfaqgpp qagagpslvs llpdteiypa gpsewpspdp fpvtrtpgtq
      601 gqseeselrs ccpcswgflm pftm
//
LOCUS       XP_061015718             615 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133068521 isoform X2 [Dama dama].
ACCESSION   XP_061015718
VERSION     XP_061015718.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159735.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..615
                     /product="uncharacterized protein LOC133068521 isoform X2"
                     /calculated_mol_wt=69345
     CDS             1..615
                     /gene="LOC133068521"
                     /coded_by="XM_061159735.1:142..1989"
                     /db_xref="GeneID:133068521"
ORIGIN      
        1 mgrrkkksre eregadrkfk gqprnkrwki lawfrrhryp qtaavplaes segfsqlvle
       61 gcfleacrsi sslaedgqdr gsqyqivaqg mwqvireale ggggsrelqr klrsvaaave
      121 wargssrelg gdlaswdcql rtqlrndaen rvppsprdrv plspgdqlgg ylaelaeavd
      181 cgldprragw lgarlsatyr ecfqevlldr lsvllirsgd pdscrelytw arktlfgqla
      241 ktpepaatrk lldplmfvtw msqvqsrlve liqkelekql edvltcdqke satsscqafl
      301 kifqllkgti dsvqdigppi tsrvqamvln tfleflkryr gegaphflqq qagagpapql
      361 hvlqnccvlr ktwqdlgqar tpladvvlrt isaiedrsqd dlvsvvrsqy rsllghhfgr
      421 edeelaqalr slrrglehyp tllppptyks lvqslykavf teylqalvth lkrlkprkwe
      481 dhrgqvetdf qelheafgrq eeafmevfql sgkqgnpcld ewldsfrdrf pdyvrreska
      541 rdgqgfaqgp pqagagpslv sllpdteiyp agpsewpspd pfpvtrtpgt qgqseeselr
      601 sccpcswgfl mpftm
//
LOCUS       XP_061015719             198 aa            linear   MAM 02-DEC-2023
DEFINITION  protein RD3-like [Dama dama].
ACCESSION   XP_061015719
VERSION     XP_061015719.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159736.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..198
                     /product="protein RD3-like"
                     /calculated_mol_wt=22672
     Region          6..129
                     /region_name="RD3"
                     /note="RD3 protein; pfam14473"
                     /db_xref="CDD:464183"
     CDS             1..198
                     /gene="RD3L"
                     /coded_by="XM_061159736.1:1..597"
                     /db_xref="GeneID:133068523"
ORIGIN      
        1 mpffgwmkwp kydsyksthy pdsdvvtktl lrelkwhlke rerliqeien eqkvkktgvd
       61 ynwlrsyqsp haaipateqr qlevlcsqvq pcqtgtvlsr frevlaendv lpweivyifk
      121 qvlrdflssa draspqegpe gapsaarpgl sgtpgggpeg pdkdeiptis syvdrntknr
      181 fptlshriwn lpyyypss
//
LOCUS       XP_061015720            1302 aa            linear   MAM 02-DEC-2023
DEFINITION  ATP-dependent RNA helicase TDRD9 [Dama dama].
ACCESSION   XP_061015720
VERSION     XP_061015720.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159737.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1302
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1302
                     /product="ATP-dependent RNA helicase TDRD9"
                     /calculated_mol_wt=147012
     Region          50..>670
                     /region_name="HrpA"
                     /note="HrpA-like RNA helicase [Translation, ribosomal
                     structure and biogenesis]; COG1643"
                     /db_xref="CDD:441249"
     Region          52..235
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            order(77..83,174)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350746"
     Region          825..925
                     /region_name="Tudor_TDRD9"
                     /note="Tudor domain found in Tudor domain-containing
                     protein 9 (TDRD9) and similar proteins; cd20431"
                     /db_xref="CDD:410502"
     Site            order(875,884,900,903,905)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410502"
     CDS             1..1302
                     /gene="TDRD9"
                     /coded_by="XM_061159737.1:146..4054"
                     /db_xref="GeneID:133068524"
ORIGIN      
        1 meyvdkyrql eaqefylyfl dhlisgsgpr ppvakssnvi cipqtaykyp dlpisrckee
       61 visliesnsv viihgatgsg kssqlpqyvl dhalqrsayc nivvtqprki gassiarwis
      121 rergwvlggl vgyqvgleki atedtkliym ttgvllqkiv saksltefth vfidevhert
      181 eemdflllvv rkllrtnsrf vkvvlmsati ncrefadyfa vpvqnkmnpa yvfevegkpf
      241 sieeyylndl ehihhgrlsp hlleepvitk avyevavsli qmfddldmke sgaktrpgtl
      301 fvserssvlv flpglgeiny mhelltnmvh krlqvyplhs svtleeqnnv flspvpgyrk
      361 iilstniaes svtvpdvkyv idfcltrtlv cdedtnyqsl rlswasktsc eqrkgragrv
      421 skgycyrlvh kdfwdnsips hvipemlrcp lgstilkvkl ldmgeprall atalsppsls
      481 diertilllk evgalavsgq redenphdge ltflgrvlaq lpvsqqlgkl ivlghvfgcl
      541 decliiaasl slknffampf rqhldgyrnk vnfagssrsd cialveafra wqtcrqrgel
      601 rhpkdelewg rlnyiqikri revaelyeel ktrisqfnmy vdsrrpvmdq eythkqrfil
      661 qavlagafyp nyftfgqpde eiamrelagk dpkttvvlkh ippygflyhq qlqslfrqcg
      721 qvksivfdga kafvefsrnp terfktlpav ymaikmsqrk vsldlsvhsa eeieakvpgg
      781 avsklrntrv nvdfqkqtvd pmqvsfntld ksrtitdlll tievtevvev ghfwgyrtde
      841 knweflkrlt aeinrltlvp lpvhphpdlv clapfadndk esyfraqily vsgdsaevff
      901 vdygnrarva lgvlmeipcq flelpfqale fkickmrpsa qclvcgerws gaagrrfsvl
      961 vggrtllvkv fsvvhsvlhv daylpsglqd tvsvrgilig qgyaepaeep yeskqshevl
     1021 kglfsksven ltdmsmvspg kedekyliri llesfssnkl gnpnckavlh gpfnpyelkc
     1081 hsltriskfr cvwiekesin svvisdsped vhqrllvaas lsvnttgstm llrettlmph
     1141 ipglpallsm lfapvmelrv nqdgkcytgv lcglgcnltt gapilpehdm elafdvqfsv
     1201 edvmeinilr aainklvcdg pngskclgpe riaqlqdnsr qkllglfcql kprqkvvpkw
     1261 hekpyewnqv dpklvmeqad ressrgkntf lyqlhklivl ss
//
LOCUS       XP_061015721             159 aa            linear   MAM 02-DEC-2023
DEFINITION  nutritionally-regulated adipose and cardiac enriched protein
            homolog [Dama dama].
ACCESSION   XP_061015721
VERSION     XP_061015721.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159738.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..159
                     /product="nutritionally-regulated adipose and cardiac
                     enriched protein homolog"
                     /calculated_mol_wt=17193
     Region          33..154
                     /region_name="DUF4658"
                     /note="Domain of unknown function (DUF4658); pfam15555"
                     /db_xref="CDD:464765"
     CDS             1..159
                     /gene="C13H14orf180"
                     /coded_by="XM_061159738.1:78..557"
                     /db_xref="GeneID:133068525"
ORIGIN      
        1 mktaahalsp nsrpetqhqt rkneeaapgs pmpraaregr kspasilrrs pqehcgrgde
       61 prrptrhvrf replevavhy iacreptata kapsrprprg gslllrltac illvlalgvc
      121 cgqagpvaga leglrvrlla allrlrlaal acwrcllql
//
LOCUS       XP_061015722             184 aa            linear   MAM 02-DEC-2023
DEFINITION  apoptosis regulatory protein Siva isoform X1 [Dama dama].
ACCESSION   XP_061015722
VERSION     XP_061015722.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159739.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..184
                     /product="apoptosis regulatory protein Siva isoform X1"
                     /calculated_mol_wt=19068
     Region          1..184
                     /region_name="Siva"
                     /note="Cd27 binding protein (Siva); pfam05458"
                     /db_xref="CDD:283184"
     CDS             1..184
                     /gene="SIVA1"
                     /coded_by="XM_061159739.1:54..608"
                     /db_xref="GeneID:133068526"
ORIGIN      
        1 mpkrgcpfad aaplqlkvrv gqrelsrgvc aerltreife kttqllfrga qacmdpawee
       61 gcaivhtpes prpgpteapr aargqmligp dgrltrsraq aseadpagta sgacsscvra
      121 vdgkaacgqc eralcarcvr tccscgavac alcahvdssa arslscggdl hervlcsgca
      181 vfea
//
LOCUS       XP_061015723             176 aa            linear   MAM 02-DEC-2023
DEFINITION  apoptosis regulatory protein Siva isoform X2 [Dama dama].
ACCESSION   XP_061015723
VERSION     XP_061015723.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159740.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..176
                     /product="apoptosis regulatory protein Siva isoform X2"
                     /calculated_mol_wt=18308
     Region          1..176
                     /region_name="Siva"
                     /note="Cd27 binding protein (Siva); pfam05458"
                     /db_xref="CDD:283184"
     CDS             1..176
                     /gene="SIVA1"
                     /coded_by="XM_061159740.1:54..584"
                     /db_xref="GeneID:133068526"
ORIGIN      
        1 mpkrgcpfad aaplqlkvrv gqrelsrgvc aerltreife kttqllfrga qacmdpawee
       61 gcaivhtpes prpgpteapr aargqmligp dgrltrsraq aseadpagta sgacsscvra
      121 vdgkaacgqc eralcarcvr tccscgavac alcahvdcgg dlhervlcsg cavfea
//
LOCUS       XP_061015724             352 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein CLBA1 [Dama dama].
ACCESSION   XP_061015724
VERSION     XP_061015724.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159741.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..352
                     /product="uncharacterized protein CLBA1"
                     /calculated_mol_wt=37925
     Region          224..299
                     /region_name="Clathrin_bdg"
                     /note="Clathrin-binding box of Aftiphilin, vesicle
                     trafficking; pfam15045"
                     /db_xref="CDD:464467"
     CDS             1..352
                     /gene="CLBA1"
                     /coded_by="XM_061159741.1:506..1564"
                     /db_xref="GeneID:133068527"
ORIGIN      
        1 msperlpias vrargtnmqd qrelrgtpgq glpvcaflsd lpeqaggcsl hqvskdlgap
       61 grqsgdavew arphstlppl dgearisgds feglststar gpdpgehsga wgefegfres
      121 sasseqfsqs felrerpsas qpwrtasaqk ehcssqphqg gvtgtgaiap sepivscedv
      181 frsafqevpv pqapegistl dhfletrnee nsglesvhkl csesrklwra lhntgtmtis
      241 rcvwsesrsr enflpvlgvd aaqkslsgsp grtlgepglh epeelgfrlq rcraliqtkl
      301 sgtpgggqgs lityslflkt pvhgngqyit iprkkifspr nlkltlfnsd ic
//
LOCUS       XP_061015725             352 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein CLBA1 [Dama dama].
ACCESSION   XP_061015725
VERSION     XP_061015725.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159742.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..352
                     /product="uncharacterized protein CLBA1"
                     /calculated_mol_wt=37925
     Region          224..299
                     /region_name="Clathrin_bdg"
                     /note="Clathrin-binding box of Aftiphilin, vesicle
                     trafficking; pfam15045"
                     /db_xref="CDD:464467"
     CDS             1..352
                     /gene="CLBA1"
                     /coded_by="XM_061159742.1:229..1287"
                     /db_xref="GeneID:133068527"
ORIGIN      
        1 msperlpias vrargtnmqd qrelrgtpgq glpvcaflsd lpeqaggcsl hqvskdlgap
       61 grqsgdavew arphstlppl dgearisgds feglststar gpdpgehsga wgefegfres
      121 sasseqfsqs felrerpsas qpwrtasaqk ehcssqphqg gvtgtgaiap sepivscedv
      181 frsafqevpv pqapegistl dhfletrnee nsglesvhkl csesrklwra lhntgtmtis
      241 rcvwsesrsr enflpvlgvd aaqkslsgsp grtlgepglh epeelgfrlq rcraliqtkl
      301 sgtpgggqgs lityslflkt pvhgngqyit iprkkifspr nlkltlfnsd ic
//
LOCUS       XP_061015726             352 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein CLBA1 [Dama dama].
ACCESSION   XP_061015726
VERSION     XP_061015726.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159743.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..352
                     /product="uncharacterized protein CLBA1"
                     /calculated_mol_wt=37925
     Region          224..299
                     /region_name="Clathrin_bdg"
                     /note="Clathrin-binding box of Aftiphilin, vesicle
                     trafficking; pfam15045"
                     /db_xref="CDD:464467"
     CDS             1..352
                     /gene="CLBA1"
                     /coded_by="XM_061159743.1:211..1269"
                     /db_xref="GeneID:133068527"
ORIGIN      
        1 msperlpias vrargtnmqd qrelrgtpgq glpvcaflsd lpeqaggcsl hqvskdlgap
       61 grqsgdavew arphstlppl dgearisgds feglststar gpdpgehsga wgefegfres
      121 sasseqfsqs felrerpsas qpwrtasaqk ehcssqphqg gvtgtgaiap sepivscedv
      181 frsafqevpv pqapegistl dhfletrnee nsglesvhkl csesrklwra lhntgtmtis
      241 rcvwsesrsr enflpvlgvd aaqkslsgsp grtlgepglh epeelgfrlq rcraliqtkl
      301 sgtpgggqgs lityslflkt pvhgngqyit iprkkifspr nlkltlfnsd ic
//
LOCUS       XP_061015727             352 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein CLBA1 [Dama dama].
ACCESSION   XP_061015727
VERSION     XP_061015727.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159744.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..352
                     /product="uncharacterized protein CLBA1"
                     /calculated_mol_wt=37925
     Region          224..299
                     /region_name="Clathrin_bdg"
                     /note="Clathrin-binding box of Aftiphilin, vesicle
                     trafficking; pfam15045"
                     /db_xref="CDD:464467"
     CDS             1..352
                     /gene="CLBA1"
                     /coded_by="XM_061159744.1:289..1347"
                     /db_xref="GeneID:133068527"
ORIGIN      
        1 msperlpias vrargtnmqd qrelrgtpgq glpvcaflsd lpeqaggcsl hqvskdlgap
       61 grqsgdavew arphstlppl dgearisgds feglststar gpdpgehsga wgefegfres
      121 sasseqfsqs felrerpsas qpwrtasaqk ehcssqphqg gvtgtgaiap sepivscedv
      181 frsafqevpv pqapegistl dhfletrnee nsglesvhkl csesrklwra lhntgtmtis
      241 rcvwsesrsr enflpvlgvd aaqkslsgsp grtlgepglh epeelgfrlq rcraliqtkl
      301 sgtpgggqgs lityslflkt pvhgngqyit iprkkifspr nlkltlfnsd ic
//
LOCUS       XP_061015729             222 aa            linear   MAM 02-DEC-2023
DEFINITION  uridine diphosphate glucose pyrophosphatase NUDT14 [Dama dama].
ACCESSION   XP_061015729
VERSION     XP_061015729.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159746.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..222
                     /product="uridine diphosphate glucose pyrophosphatase
                     NUDT14"
                     /calculated_mol_wt=23572
     Region          25..212
                     /region_name="NUDIX_UGPPase_Nudt14"
                     /note="UDP-glucose pyrophosphatase; cd18887"
                     /db_xref="CDD:467597"
     CDS             1..222
                     /gene="NUDT14"
                     /coded_by="XM_061159746.1:39..707"
                     /db_xref="GeneID:133068530"
ORIGIN      
        1 mervegaavs rcaaspyllp ltlhyrqnga qkswdfmkth dsvtillfns srrslvlvkq
       61 frpavyagev erlfpgslaa aeldgpralp avlpgsagvt yelcaglldq pglspeevac
      121 keaweecgyr lapsdlrrva syksgvglts ssqtmfyaev tnaqrggpgg glaeegelie
      181 vvhlpldgar afaddpdvpk tlgvifgisw ffscvapglg pq
//
LOCUS       XP_061015730             318 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 121 [Dama dama].
ACCESSION   XP_061015730
VERSION     XP_061015730.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159747.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..318
                     /product="transmembrane protein 121"
                     /calculated_mol_wt=35473
     Region          73..267
                     /region_name="CECR6_TMEM121"
                     /note="CECR6/TMEM121 family; pfam14997"
                     /db_xref="CDD:464432"
     CDS             1..318
                     /gene="TMEM121"
                     /coded_by="XM_061159747.1:201..1157"
                     /db_xref="GeneID:133068531"
ORIGIN      
        1 mvlpppdrrh vclttlvimg smavmdaylv eqnqgprkig vciivlvgdv cfllvlryva
       61 vwvgaevrta krgyamilwf lyifvleikl yfifqnykaa rrgaadpvar kaltlllsvc
      121 vpglflllva ldrmeyvrtf rkredlrgrl fwvaldlldl ldmqaslwep prsglplwae
      181 gltffycyml llvlpcvals evsmqgehia pqkmmlypvl slatvnvvav laraanmalf
      241 rdsrvsaifv gknvvalatk actfleyrrq vrdfpppala lelqppapqr nsvppppplh
      301 gppgrprgps ptrdaldt
//
LOCUS       XP_061015731             212 aa            linear   MAM 02-DEC-2023
DEFINITION  pyroglutamyl-peptidase 1-like protein [Dama dama].
ACCESSION   XP_061015731
VERSION     XP_061015731.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159748.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..212
                     /product="pyroglutamyl-peptidase 1-like protein"
                     /calculated_mol_wt=23293
     Region          16..186
                     /region_name="Peptidase_C15"
                     /note="Pyroglutamyl peptidase (PGP) type I, also known as
                     pyrrolidone carboxyl peptidase (pcp) type I: Enzymes
                     responsible for cleaving pyroglutamate (pGlu) from the
                     N-terminal end of specialized proteins. The N-terminal
                     pGlu protects these proteins from...; cl00237"
                     /db_xref="CDD:444776"
     Site            order(68..70,119,122..126,164..165,167,173,175)
                     /site_type="active"
                     /note="AC domain interface [active]"
                     /db_xref="CDD:238279"
     Site            order(74,136,160)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238279"
     Site            order(75..76,80,82,83,93..94,103..106,112,129..130,133)
                     /site_type="active"
                     /note="AB domain interface [active]"
                     /db_xref="CDD:238279"
     Site            175
                     /site_type="active"
                     /note="interchain disulfide [active]"
                     /db_xref="CDD:238279"
     CDS             1..212
                     /gene="PGPEP1L"
                     /coded_by="XM_061159748.1:1..639"
                     /db_xref="GeneID:133068532"
ORIGIN      
        1 mlpqakdygg cqklkeelsk lglgsdmqve lrilqlpvdy revkqrvari wedlrpqfvv
       61 hvgvdpaaka ifleqcsknr gyrdadirgf rpecgvclpd gpeviasevs mkavsrraav
      121 qgvevafsrd agryvcdyay ylslhhgngc aalihvpqls pwlpasllgk alqviiqeml
      181 eeiekarapn lvhrklslcs ssqgeptggl ll
//
LOCUS       XP_061015732              75 aa            linear   MAM 02-DEC-2023
DEFINITION  cytochrome b-c1 complex subunit 10-like [Dama dama].
ACCESSION   XP_061015732
VERSION     XP_061015732.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159749.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 27% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..75
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..75
                     /product="cytochrome b-c1 complex subunit 10-like"
                     /calculated_mol_wt=8294
     Region          21..71
                     /region_name="UCR_6-4kD"
                     /note="Ubiquinol-cytochrome C reductase complex, 6.4kD
                     protein; pfam08997"
                     /db_xref="CDD:462652"
     CDS             1..75
                     /gene="LOC133068538"
                     /coded_by="XM_061159749.1:1..228"
                     /db_xref="GeneID:133068538"
ORIGIN      
        1 mlafdmsrdw itlswdgaei lsrflgphsw elagswiptv gmwgavgtvg lawgtawqli
       61 lgwvpyinsk fkknv
//
LOCUS       XP_061015733             443 aa            linear   MAM 02-DEC-2023
DEFINITION  OTU domain-containing protein 6A-like [Dama dama].
ACCESSION   XP_061015733
VERSION     XP_061015733.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159750.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 34% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..443
                     /product="OTU domain-containing protein 6A-like"
                     /calculated_mol_wt=49949
     Region          6..247
                     /region_name="COG5539"
                     /note="Predicted cysteine protease (OTU family)
                     [Posttranslational modification, protein turnover,
                     chaperones]"
                     /db_xref="CDD:227826"
     Region          135..276
                     /region_name="OTU"
                     /note="OTU (ovarian tumor) domain family; cl45892"
                     /db_xref="CDD:459237"
     Site            order(155,209,212,219..222,246,248,261,270..272)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438581"
     CDS             1..443
                     /gene="LOC133068539"
                     /coded_by="XM_061159750.1:34..1365"
                     /db_xref="GeneID:133068539"
ORIGIN      
        1 medsrsekqr mlrrhhrekk glqariqlmr ssvpksdkkk rkqlhldvar leaemeqkhq
       61 qelekfqedf pgisnldsvt edlakmdlen qpphllraqr krerraaler trqeriaevn
      121 meylasfrqd eeeklgaile akhlemkdtp tdshcmyrai qdqlvfsvtv eslrnrtaey
      181 mrkhvddflp fssdpetgda dsrdrffsyc ddivcsaswg gqrglralsh ilqtpvevsq
      241 adspaivtgg eytrqplilv cvrsacnfge hsksvkpqea gatggatprl fqaglcrrcg
      301 gchrsrsqry hpelepsshp ghlapaashh lltklnprdl dntqricrrp splcstqalh
      361 taapaqgdcl prswghgapv ptslptllpn erskikteap pfsfrgtnsi psvtqrhpth
      421 stltthttqr hllpkhtgla vll
//
LOCUS       XP_061015734            1157 aa            linear   MAM 02-DEC-2023
DEFINITION  cytosolic carboxypeptidase 4 [Dama dama].
ACCESSION   XP_061015734
VERSION     XP_061015734.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159751.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083693) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1157
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="13"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1157
                     /product="cytosolic carboxypeptidase 4"
                     /calculated_mol_wt=129550
     Region          630..764
                     /region_name="Pepdidase_M14_N"
                     /note="Cytosolic carboxypeptidase N-terminal domain;
                     pfam18027"
                     /db_xref="CDD:407865"
     Region          788..1055
                     /region_name="M14_Nna1"
                     /note="Peptidase M14-like domain of ATP/GTP binding
                     proteins and cytosolic carboxypeptidases; cd06906"
                     /db_xref="CDD:349477"
     Site            order(838,841,888,897..898,935..936,945,1020)
                     /site_type="active"
                     /db_xref="CDD:349477"
     CDS             1..1157
                     /gene="AGBL1"
                     /coded_by="XM_061159751.1:1..3474"
                     /db_xref="GeneID:133068540"
ORIGIN      
        1 mastsrrpak gmigdhtrwe tveedaeths fpavgctlac llkdgcllsl qsssdresil
       61 tilqllgdll sigtdrriry miskggseal lrtlvetart aspdyvillp lfrllakvgl
      121 rdkkfgqkal elealdvtli larknlchsq nllhclwalr vfassvttga mlgingamel
      181 llkvitpytq khtqviraaa evlaallksk snsrravnrs yvpsllrlhq dwhshdtans
      241 fvlirwalll clkriaklrs greaflaaqg meilfstiqs clddqslepv isialqilrq
      301 cypksplplv ttssaysfpv pgiitsetpc vlteedyedd geeeedkdsd sedvkeeddd
      361 letdvnklss kpgldrpeee lmqykamcle lscsfeeles kpgddlnsde teyanhrhip
      421 taaspkglcl nkdqisegqe kevpvqtsll srvkmgrsni hltskrgpgm nshqnvhsng
      481 pgidssgsdv sniqasfqed awdmdaiscp risasfsnsa ktretakfid qllqthlkpv
      541 vfhdpylyma karitrsvad ftrmafpdfw ghcpplsaqp mlqrkcgvqr ikiledvqrl
      601 iqpsdiinkv vfsldepwpl qdtasdclqf fsafesgnlr kaiqvrqfey dllvnadvns
      661 mqhqqwfyfk vsgmraavpy rfniincekp nsqfnygmql tlysvkdall grptwvrtgy
      721 dicyyknhyr qrtaitgaas gkcyytltft itfphaedtc ylayhypyty salmthldil
      781 eksvnhkqvy fqqevlcqtl ggnscplvti tampesnsad hleqfrqrpy qvitarvhpg
      841 esnaswvmkg tleflvssdp vakllrenfi fkiipmlnpd gvingnhrcs lrgedlnrqw
      901 lspsarlqpt iyhakgllhy ldsvgrspvv fcdfhghsqk knvflygcsi ketlwqaest
      961 vgtsnllenv syrtlpkild klapaftmss csflveksra starvvvwre mgvsrsytme
     1021 ssycgcnqgp yqglqfgtse leemgamfcl gllvlelksg scshqlltra aallnaeees
     1081 ldfylqkcss cssnssiase lddeppclee idygtdinsd qegsfseldr qiqecafhkd
     1141 egeeeeegtg qgrntip
//
LOCUS       XP_061015747             855 aa            linear   MAM 02-DEC-2023
DEFINITION  HHIP-like protein 2 [Dama dama].
ACCESSION   XP_061015747
VERSION     XP_061015747.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159764.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 17% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..855
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..855
                     /product="HHIP-like protein 2"
                     /calculated_mol_wt=94550
     Region          44..>182
                     /region_name="Folate_rec"
                     /note="Folate receptor family; pfam03024"
                     /db_xref="CDD:397250"
     Region          207..598
                     /region_name="YliI"
                     /note="Glucose/arabinose dehydrogenase, beta-propeller
                     fold [Carbohydrate transport and metabolism]; COG2133"
                     /db_xref="CDD:441736"
     Region          <644..845
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..855
                     /gene="HHIPL2"
                     /coded_by="XM_061159764.1:1..2568"
                     /db_xref="GeneID:133068818"
ORIGIN      
        1 mlrrsiprgg wswrtpwllt sprifclsli vllglvgllq ghpqcldyrp pfqplqhlqf
       61 csdyesfgcc dqrkdhriaa rywdimeyfd lkghelcggy ikdilcqecs pyaahlydae
      121 nprtplrnlp glcsdycsaf hsnchsaial ltddrrlres pgedgtrfch llnlpdedyc
      181 fpsilrrghl nrnlgavaed prgclqlcla evanglrnpv smvhagdgth rffvaeqvgv
      241 vwvylpdgsr leqpfldlks lvlttpwigd ergflglafh prfrrnrkfy iyysclgkkr
      301 vekirisemk vsradpnkad pkservilei eepasnhngg qllfgldgym yiftgdggqa
      361 gdpfgkfgna qnkssllgkv lridvngags ggkryrvpvd npfvsepgah paiyaygvrn
      421 mwrcavdrgd pvtrqgrgrm fcgdvgqnrf eevdiivkgg nygwrakegf acydkklcqn
      481 aslddilpiy ayghavgksv tggyvyrgce spnlnglyif gdfmsgrlma lqedrrtkkw
      541 kkqdiclgst escafpglis shskfiisfa edeagelyfl atsypsayap rgsiykfvdp
      601 srrappgkck ykpvpvktks krvqfrplak mvldllkeqs ekaarklssa tlasspnras
      661 sqkdsfrkpa sptssrktsp rpgakkrarv wspgsqgkrk gipkrpggrt rqaawqrrag
      721 rslppplgsr wplrgpeaph hveaaaaaer dlrragsqgw rgrasepgwp pkpgrprvit
      781 aqasvqatla klgvpesaqn aqagrgqasg llatalpagc aaqlqaqhrf rarpargavp
      841 gasrplcpfv aqcra
//
LOCUS       XP_061015748             154 aa            linear   MAM 02-DEC-2023
DEFINITION  protein cornichon homolog 3, partial [Dama dama].
ACCESSION   XP_061015748
VERSION     XP_061015748.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159765.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         <1..154
                     /product="protein cornichon homolog 3"
     Region          20..145
                     /region_name="Cornichon"
                     /note="Cornichon protein; pfam03311"
                     /db_xref="CDD:460883"
     CDS             1..154
                     /gene="CNIH3"
                     /coded_by="XM_061159765.1:<1..465"
                     /db_xref="GeneID:133068820"
ORIGIN      
        1 spgarvtgna ytallthfrw qiiafdelrt dfkspidqcn pvharerlrn iericfllrk
       61 lvlpeysihs lfcvmflcaq ewltlglnvp llfyhfwryf hcpadssela ydppvvmnad
      121 tlsycqkeaw cklafyllsf fyylycmiyt lvss
//
LOCUS       XP_061015749            4593 aa            linear   MAM 02-DEC-2023
DEFINITION  dynein axonemal heavy chain 14 [Dama dama].
ACCESSION   XP_061015749
VERSION     XP_061015749.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159766.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4593
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..4593
                     /product="dynein axonemal heavy chain 14"
                     /calculated_mol_wt=529045
     Region          966..1371
                     /region_name="DHC_N2"
                     /note="Dynein heavy chain, N-terminal region 2; pfam08393"
                     /db_xref="CDD:462462"
     Region          1195..4197
                     /region_name="DYN1"
                     /note="Dynein, heavy chain [Cytoskeleton]; COG5245"
                     /db_xref="CDD:227570"
     Region          1504..1837
                     /region_name="AAA_6"
                     /note="Hydrolytic ATP binding site of dynein motor region;
                     pfam12774"
                     /db_xref="CDD:463697"
     Region          4192..4588
                     /region_name="Dynein_C"
                     /note="Dynein heavy chain C-terminal domain; pfam18199"
                     /db_xref="CDD:465677"
     CDS             1..4593
                     /gene="DNAH14"
                     /coded_by="XM_061159766.1:1..13782"
                     /db_xref="GeneID:133068823"
ORIGIN      
        1 maqeglglvl aywrrvlkyk egryyqdvlp sgnrpagket lkhktlgtis vplksekaee
       61 iyqdytpgil qqdvltsepl pskkkekske kdqthacpnv rkkrltsydr tvpndddvic
      121 hiirlreklg wqtvlpqhsl eyrcfktatq killkeplkd dgefiycllr knskalynpy
      181 dlhvvsahra rhckefwiit asfiskvtki gaeeeielvp tlewllerrf yyllqqfkif
      241 snfrinklfv twkltvkrik tdksrsllyr nlffadelfq acllyikglc edavslkkgd
      301 ednsnaiclv kldkfrtysl hefceeqlhq atqalkqled irdkaiseik ltilkvaekk
      361 dikeyfesnl sedmthfklp tyrrllevif rfltlvdymf qeltrqlmnt avtlllelfn
      421 gsarmpvsve kknenlikih kdsfaftgkm tsdydeidns nlyaypvlks evktqdneil
      481 nsikvdtdlr kipapifevn lqlrtpaesd ssenseenlh esdecseksa iygdtsenev
      541 nvfikqsske llpmkkskrm sysyeilsel dfetefeknc msdellefpt nlfitpnrle
      601 fsiqiqnmva aiekcitkii plcqdprlsi ftestlimdl pnknksvidc qtrwpdcqvl
      661 femdpayqdk ivsfltiigt smgqvniysc qfrkyctmve kakimgtkis smeeltsaqf
      721 ksilskfrny lrqivnmaie krigifkvms fdyqlqclpy veniidmsqn llrsvierkn
      781 anllevidss lqkleytpte iqefleyftf ldaisskisk lekeytivaq lysvvryyqi
      841 hvseeqiaiy killikfgql ktsvklsetn kdaaiskfrd nlesyitglr ievsnlkaki
      901 rnsvllcast pvstamemiq nlseeaasla vkaktysnyq dcfddsqshm qflnveeiiq
      961 ivlseiadid ydltlrkilw daqeewgtvf wewrnstlds idtesvyrnv skwmqiifvl
     1021 ekglpkndmv thlkqsvidf kqelpiiial gnpclkprhw ealqeiigks vsldknctve
     1081 nllalkmfqy eneineists atneaalekm lyriidlwnt tplhlvlhht eaysiliiss
     1141 iddtlaqlee sqiilatvkg ssylgpikdl vdewdqnlal fsytleewmn cqrnwlylep
     1201 ifhsteiqrq lpaeaklfsq vismwkeiml kihnkldalh iatsagvlei lqncnihley
     1261 ikknledyle tkrmifprfy flsnaelldi lsdsrnpeci qphlvkcfen irhlliwkqe
     1321 igppavimfi saegetlvlp kkirirsgie qwlvnvektm fdlvkkfisq gvddwyyqqf
     1381 slwvlshpgq vvltvskiif yndciksfvs shpkkevekv harmihglee vaelvvldth
     1441 nsrakvvlga lltlyvhcrd ivrdlllksi fnaddfewtr hlqykwnekq klcyvsqgda
     1501 sftygyeylg ctprlvitpl tdrcwltltg alhlnlggcp agpagtgkte sikdlakslg
     1561 khcvvfncfe nldykimgkf ffglvetgaw ccfdefnrid vevlsviasq mltikaakds
     1621 ysvrfvlegk eirinmscav fvtlnpgykg rvelpdnlks lfrpvammap hyqmiaevml
     1681 fsvgfksakl lsgklvniye laskqlsqqd hydfglrslk tvlvmagkkk relkcsisdi
     1741 seteetliii ealreaslpk flpkdvllfe kimrdifcga tvskvnqivl eklieiatqq
     1801 lglqqwpaqk eriiqfynql qacvgvmlvg ptgggkttvr rileraltll pieeflliee
     1861 rdsisqisgr rgkidiciln pkcitisely ghldpntmew adgllsatir nyvylnttky
     1921 snkdseskis dsanvfkldf sdaadsdyhi fekemekdik ipesqnfdwq wivldgpvdn
     1981 fwvenlnsml ddtrtlclan seritltski rvifevdsla qaspaivsrc amvymnpvdl
     2041 gwepyvkswl lknskimnks evdclefmik ssvtdglqfi kkhqkfqpfp vqditivttl
     2101 crildaffef msktgifelr edlkdissee iishskvslk fkdmenrgen awpmeknpik
     2161 lkktiqklfv faftwafggt lqredehedd iifypssepd sparvtydfd nlvrelfesn
     2221 aqiginlpng ehsifayfvd iqqcefipws ellpniqtli qrgssiladp qgssenllkm
     2281 tecgesinyi atrdttclsf lvslllknsc pvlltgdfgv gktaainqml eklegsgald
     2341 vkygsilgev llyneikksr ffkqnisill sethktatgg ldkitkkaed ktgessfkng
     2401 nkgiivsain fnintsaakt kemilkklvr rsqdslgapk nnrvvifidd lnmpesdmyg
     2461 aqpplelirq lldmggiydt ekiawkniqd lslvaacvfp vsrryisprl lkhfsilvlp
     2521 hlpqtaikti fqvhlgmyfs innfvpevqk tkdqiisccl avyyqvcqtm lptpmkchym
     2581 fnlrdifkll qgllqadkfv vnskelaalf fvheatrvfh drlleqaeqv lfyqilskel
     2641 enyfqiqwtk eklmndpiif vdfldvnksh rkktyqytnd ynklaevlte fqmklnsasl
     2701 eishslvffk eaiehiarat rilrqsgshm lligidgcgk etcatlacyl aehkiyrvpl
     2761 shnyaylefk edfkkvfmqa glegnpsali vsnlnldqel fmedlnsiin lgkipdlfen
     2821 eeldaialrl rslaeqsgyv dnrqillsff qkrihknlhi fmtmsptrpn fhqncrlyps
     2881 listctvdwy ekwpeealli vadaflrekv diesrenlke klaptcvqih rsikelniky
     2941 fqttrrpyyi tpsnylrfmd tfayilksre kemqkkrerf hmglskilet talvtdmqee
     3001 llilgpqieq ktkekeilme klqkdsqvve kvqmlvkqde eimaeevriv eeyaqkadke
     3061 lksvlpaldk afvalnaldk advselrvyt rppylvltvm navcillqkk pnwttaklll
     3121 setgflkkli nidkdnipek afiklkkilv lpdfnpnkia lvsvaccsmc qwvialnnyh
     3181 eaqkllgpkq iqvaeaqnvl kiaqqrldek qrglqlveeh lqflqeayke ivaekellah
     3241 rrklatkrlq casilltale dektrwqeti dqidnklegi lgdilisaac ivysgvltae
     3301 frqlivekwq nlctennism ssdfslievm aqkheirqwh hqglplgqhs tenailikng
     3361 lqwpllidph kqahswirqm egsrlqelst kdgnyiqtie namktggsil lqnlpekldp
     3421 slkeilkkdi yqrrgqyfik indseieyns kfrlyvstei dnpyfppfly sfvtminftv
     3481 tfqgfqdqll sivlshevph lenqrfqlle sisldaktle eleqktlnll qnaqgfvldd
     3541 eeivdilrks kmtsneiskr ikatrkaese ieetrklylp iatrgallyf lvsnlakidy
     3601 myqfsldwfr qifvssvvsk skeqeehslk rermflkkgh eitnlskepk lesekrtldr
     3661 hlknsidtlt rnifkvvssa lfnrhklcfs fglcttimqn nangnlmqdd vgslpeeewn
     3721 iflnssmlvn ikgvmpqpkl nnkyetcknk hlqwvsdsrw kqclyisnal epfsllcksl
     3781 lsnvsqwnaf knskavyllm stafssenas leesekspei aqvfneneei yssinfpwek
     3841 ltpfqrlili kilkpeglkn svkrfiteki gneyihstgt slkesyeesn artplilihs
     3901 hgidltntll kfaqelmgtt shvtmislgr gqaakaeali vkaltkteqw vflqnchlaa
     3961 sfmprlctiv esfnspymti epkfrlwlss ksdssfpisi lqkslkiave npqglknnll
     4021 qtfgysgsge vteelfekpd cgpwwkkilf slcffnalin erkiygilgw niayafsssd
     4081 levaikvlen ilsaqssipw qtlryligev vyggwvtdsw drrclntlly kfcnpevlkd
     4141 dfsfytdeva lplpksgsmk dyiriiqslp dddppellel hpeatrgfre iqaqkfiddl
     4201 iamqprftit nlmfgheksk delvmeilsd mlkrlpvsve keewagtqst lkyimlspiw
     4261 esihkdpkgy dplihcvllt fliqeierfd qllsiihksl kdlqlaikge iiltqeleei
     4321 cdsllnikvp klwqkyayrs ckalsswvnd liqrlnffnt wakmaytaih hrymrhvtaw
     4381 khcstspsqd pkysteqnse fsegfparyw lpafffpqaf litvlqdygr sqgistdalt
     4441 fthhvisdtt dvkdkefsii iqkklnivrr afkgtdpthv gvhvfglfie garwnhkekv
     4501 ledslpceic cdfpeiyflp tkistersna skqtepelyt fecpvyqtpe rsgiltaagl
     4561 ssnfltsvyl stkkppshwi tmqvallcee nek
//
LOCUS       XP_061015751             341 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: opsin-3, partial [Dama dama].
ACCESSION   XP_061015751
VERSION     XP_061015751.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159768.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 26% of CDS bases
            frameshifts          :: corrected 1 indel
            internal stop codons :: corrected 2 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         <1..341
                     /product="LOW QUALITY PROTEIN: opsin-3"
     Region          <51..>155
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          84..100
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320206"
     Region          128..148
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320206"
     CDS             1..341
                     /gene="OPN3"
                     /coded_by="XM_061159768.1:<1..1026"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon;
                     substituted 2 bases at 2 genomic stop codons"
                     /db_xref="GeneID:133068827"
ORIGIN      
        1 nvspvefpad cealflliyf gfwstllflf gllpfpcipt vpcyavplsl lagivsiitl
       61 trlvyecyic vihvrvihfp qawrsipciw lssivwsgas llgwnnhild mhgpgctgdw
      121 pskdtshsss vlflflgclx gviahcqghi lfsiqnkkea kvfwtdpind npqnptfsst
      181 lriekphkgd falpiikfae salkngtdtl sgnhflshkr qeltmagfvl nllarklrak
      241 lllniqlyfl ptqfxrallq llhfxllrcq tpakdisafg remclrsivm skkerdkpkq
      301 kvtfnsssii fitndeslsv gnsdrtngsk vdvtqvyplq e
//
LOCUS       XP_061015752             404 aa            linear   MAM 02-DEC-2023
DEFINITION  small ribosomal subunit protein eS4, X isoform-like [Dama dama].
ACCESSION   XP_061015752
VERSION     XP_061015752.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159769.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 35% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..404
                     /product="small ribosomal subunit protein eS4, X
                     isoform-like"
                     /calculated_mol_wt=44831
     Region          138..401
                     /region_name="PLN00036"
                     /note="40S ribosomal protein S4; Provisional"
                     /db_xref="CDD:177670"
     CDS             1..404
                     /gene="LOC133068829"
                     /coded_by="XM_061159769.1:1..1215"
                     /db_xref="GeneID:133068829"
ORIGIN      
        1 maatvsqqlt qepaaqawrw lallsescsc pgrlcstppr pcgclgngva ppchdlnvqs
       61 fvtlkislqm ellvprsekg vvpvhirfgl qnktvlpape ligkmyiqqv gtgdvghtpq
      121 qptyfllaei veqsekvgkk aglqnieapk hwmldkltgv fapcpstash klreclplii
      181 flksrfkyal tgdemkkicm qhfikikgkv htnttyptvf mnvisvdkig enfhliydtk
      241 drfavhcier qpfsiipeea kyklckvrki fvgikgiphl vthdartihy pnplikvndt
      301 iqidlgtgki tdfikfdtgn lcmmmgganl gricvitnre rhpgsfdvvh vkdangnnfa
      361 twlsnifiig kgnirwislp rgkgicltia eerdkrlaak qssg
//
LOCUS       XP_061015753             879 aa            linear   MAM 02-DEC-2023
DEFINITION  maestro heat-like repeat-containing protein family member 9 [Dama
            dama].
ACCESSION   XP_061015753
VERSION     XP_061015753.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159770.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..879
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..879
                     /product="maestro heat-like repeat-containing protein
                     family member 9"
                     /calculated_mol_wt=99625
     Site            order(471..472,475,478..479,508,511,514..515,518,546..547,
                     550,553..554,557,585..586,589,592..593,627..628,631,
                     634..635)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          492..518
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          528..558
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          567..593
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          604..636
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     CDS             1..879
                     /gene="MROH9"
                     /coded_by="XM_061159770.1:209..2848"
                     /db_xref="GeneID:133068831"
ORIGIN      
        1 mrehlatslw dtysglisnq amilalnssf vdpalqfetq lkiikssfkm afavtnldev
       61 reirmnedde ddleslyrti lnlfedtlli lvskdvyklq ilkemvvwmn edssymqeea
      121 mvvisrvlsf aarkvkgsas vnapclgvla aelsllcshs dpsitqqafv gmyhllciak
      181 cqsegtaksk nkkydkpenh ciqpsssgte flpknlqkdk skiaqsvgkt llpplltdfv
      241 wsllmklsvp dqttaseaat ilkltlecna hkvtmvskiv dtiykqlcgd dspilreaml
      301 rvitlltrts pkkvifqlmd ypvpaddili lmwyaagaes svvphvlkti llilkgkpre
      361 mekiterkhf slnatnmmpv aasqalctll plgpykkava qffpqllmal mlqlfyssnl
      421 rlmtedrpfy ardalrvlln csglqevdta lnkkncwnqf sqvlfhhhgv ylvaktlsey
      481 kfpqfpetlh ylyklavegp rrsedsviti tfltellnnf fkdpfpekfl vlfrnwvndp
      541 dpavcklslq kiasmapvin eienvcsllt sildaflskd ttviiralit lrklldrldk
      601 vtysslstri assycplmdh anggirsmai hhfgqllmdm sqytwmlndv vyaglvplil
      661 fledteervv kackytleic aselkwstly flkdeyynfe lvvlnicnnl lishqkyitd
      721 lisetlgfle ssrrylkrgs villgylakl gghlllrdei dvmleaidrv irdedpvire
      781 laeitnkill eiahklttst ikqsfqrlfn fiylkklkll ykynlpkdlt gspmgikeir
      841 ndkeaitsdh yedglvknes asvknagfps alehsseek
//
LOCUS       XP_061015754             194 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C1orf105 homolog [Dama dama].
ACCESSION   XP_061015754
VERSION     XP_061015754.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159771.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..194
                     /product="uncharacterized protein C1orf105 homolog"
                     /calculated_mol_wt=21957
     Region          25..192
                     /region_name="DUF4548"
                     /note="Domain of unknown function (DUF4548); pfam15081"
                     /db_xref="CDD:373540"
     CDS             1..194
                     /gene="C14H1orf105"
                     /coded_by="XM_061159771.1:1..585"
                     /db_xref="GeneID:133068833"
ORIGIN      
        1 mwhrkgkgek pgwkkvsvpr fdkipwfsea sftnkplvls lpkryphssa tflvaskkgm
       61 nlpilfqvpd vlskagwnqn qndptlirnk qlcptcrdvk mvqpktliip ddlklsfani
      121 mnhrmmslhl pkaqtvpkrs rddiltenvh yrlpilgprt avfhgllsda yetlketqls
      181 slprkepvgk avsq
//
LOCUS       XP_061015755             398 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: arylacetamide deacetylase-like 4 [Dama dama].
ACCESSION   XP_061015755
VERSION     XP_061015755.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159772.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 1% of CDS bases
            frameshifts          :: corrected 1 indel
            internal stop codons :: corrected 2 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..398
                     /product="LOW QUALITY PROTEIN: arylacetamide
                     deacetylase-like 4"
                     /calculated_mol_wt=44470
     Region          115..368
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
     CDS             1..398
                     /gene="AADACL4"
                     /coded_by="XM_061159772.1:1..1197"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon;
                     substituted 2 bases at 2 genomic stop codons"
                     /db_xref="GeneID:133068835"
ORIGIN      
        1 mvvlwlvlpa tlgsfvlgvf vravfehflt tdvpsalrhp akfrflhcif vyqvtlgnif
       61 ekigvcslpr flqflqnsvr ikedpalvvt nlhfgtipvr lfqpkaaspn pqrgiiffhg
      121 ggalmgslaw etdsvllvvg yrklpdhhyc tlscdclnas ihflktleth gvdssqvvlc
      181 gdslgagiva lisqtlvgrl dlpqiraxvp iypllqlinf qlpsfhqnsr ipxltqklmi
      241 tsvfkyllid fswwdaivsg afippevwkk ywkwlstdnl pnrfkktgcq pvfpapfnea
      301 aylenkhlld veyslllkdd giiaqlleaf lvscendilr ddallyrkrl edqgvpvmxy
      361 hvedgfhgsl lffdnksfsf pcslkimnav vcyiksil
//
LOCUS       XP_061015757             129 aa            linear   MAM 02-DEC-2023
DEFINITION  natriuretic peptides B [Dama dama].
ACCESSION   XP_061015757
VERSION     XP_061015757.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159774.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..129
                     /product="natriuretic peptides B"
                     /calculated_mol_wt=14038
     Region          93..123
                     /region_name="ANP"
                     /note="Atrial natriuretic peptide; pfam00212"
                     /db_xref="CDD:459713"
     CDS             1..129
                     /gene="NPPB"
                     /coded_by="XM_061159774.1:1..390"
                     /db_xref="GeneID:133068836"
ORIGIN      
        1 mdpqtalsra lllilflhls llgcrshplg gpspaselpg lqelldrlrd rvselqaeql
       61 gvehlqqgqg leetwdspaa apagflrphh silralrgpk mmrdsgcfgr rldrigslsg
      121 lgcnvlrry
//
LOCUS       XP_061015758            1480 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein C1orf167 homolog [Dama dama].
ACCESSION   XP_061015758
VERSION     XP_061015758.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159775.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 26% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1480
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1480
                     /product="uncharacterized protein C1orf167 homolog"
                     /calculated_mol_wt=164219
     Region          <663..1064
                     /region_name="COG3903"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443109"
     Region          903..1445
                     /region_name="DUF4684"
                     /note="Domain of unknown function (DUF4684); pfam15736"
                     /db_xref="CDD:464833"
     CDS             1..1480
                     /gene="C14H1orf167"
                     /coded_by="XM_061159775.1:1..4443"
                     /db_xref="GeneID:133068837"
ORIGIN      
        1 melrpdashk envpprpats lrpeprrlrk slgvglasrr gwwvpvgpae rggpaatpcp
       61 gtalrqepcr vqsnlaspnp slglvlrdmt grltnssfqq qdnlqplvgr pqgrvqdfai
      121 qqsnlcaret htaecgrlts pqlwsepqes frphlmpqgs plprgplahp ssnlrqswll
      181 atdiscpdir latglaplkg ptwsdprsrc glggwtsrlv gepltlkdla vpaqspprap
      241 sqaaihqllv cvqrlecqav rlrcqvsref pgpvrqepwt ragqtlpvrp qlsqpvldsw
      301 derrrhsrgl rettsfpetp gpqevlsdsq asskhaslgt tlemlpgdal dpeqvvlsac
      361 plrqgeqgsp gtthgwgqrg dplrppgvds rearlcssas sssaqgilpg reggdgtpre
      421 risrekerpa srnalqskar ntvnlepelg rwqwlsrcfr awwrwaqrrr avaaavalgr
      481 rqllrrglra lrwalwlrea qleaawgrht qallartfqk wrhliqqhkq gqphfhagpr
      541 plcsggdqdq gpsgrkpvvd gawrsrgwgg ppppntwhsp aagaawvall dpqhqraclc
      601 rcfgawqrfv qrgtryrahv anlqagtlrt clqqwvqmkq lrasdgakva qlslcwrkag
      661 nmalfssvpe gatvhglrlm atarvlpqeq gwgslqeacr rlalqralll wrtrlsqhqq
      721 adsffegmqw ralrhilrgw rlrardagsa riasapdplg galggeappg hsthrrsswd
      781 kasrapalle mlqlsllcav grrqqgqcll lwraraqqsr daarwqqskl qrrilldwsh
      841 wataqgarrg laarwawnrr cratlglwrq rlvqrrevew rarewgrrlq qralghwhcy
      901 wqrqvflqek cqrwvqarlq glrsavfwgw qqaaarrrpv aaspeqlllq rgpgptppgs
      961 htipgslpsa araaplplfc rhfqawcgam kasraersaf qdglrrripr atfaseaqvp
     1021 taqprelrva rascwrsreq gcqadrqlrr twaqqafvar rvalgqccka hqqtgetsra
     1081 qalcwmlwar escqhrvlrd ravptvsarw vpsslrsvpy cvgpawtlnl frvrvqsiww
     1141 lvaglwglgv mgenilviaa spgvkrqlci lqprhpllgv lktwtqsatq ghvqrtaith
     1201 fqqagprrfl rthwaqwrta llrvwlepqa qeasrahpar rraslqrwpg latrgrllvl
     1261 mnppalkrqt rscrpsamgp sptqhrspsg qmrgevswaq spaapaaelp agqapgshva
     1321 algrcswgre agmdtrewga psqphadrpp rpfpspnpwt hglskaagge rqrrgwglpg
     1381 tavgsargll vtvptaqava semglatvag arpavaggsa vtafnkwhqc laarglraka
     1441 sssmrpwska glrrpgsrpe aarapalggp gaekgaqlql
//
LOCUS       XP_061015759             605 aa            linear   MAM 02-DEC-2023
DEFINITION  draxin [Dama dama].
ACCESSION   XP_061015759
VERSION     XP_061015759.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159776.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 43% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..605
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..605
                     /product="draxin"
                     /calculated_mol_wt=64775
     Region          <14..>154
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          296..605
                     /region_name="Draxin"
                     /note="pfam15550"
                     /db_xref="CDD:464760"
     CDS             1..605
                     /gene="DRAXIN"
                     /coded_by="XM_061159776.1:1..1818"
                     /db_xref="GeneID:133068838"
ORIGIN      
        1 mgarpprgrp ptrllprasr strgrallrd vrgappgpna gsshahspls qprpgrsrga
       61 taactppvpr apgraeaalt hreewarlsr cpqgrpaapa fvyllclpra laaaaaarpl
      121 gsrtgtpsaa gegalagsal gparpraapr lgaaepsppp plplpspcsr plpsrpppsp
      181 fppaplslgt sscrprtspr gpgfaalpsa algsrrrsar spsapappvr qlrawtkvgy
      241 lersgarrag drgwkkkpsa eptthpapml llalllllel slagslgpgs saqnlpenhi
      301 dlsgpalwtp qashhrrrgl gkkergpgtp gwtqdgavvt atkqasrlpg aegllrgpsp
      361 agllqdkgll rgltrpypek esrapgserv kkrgrehkrr kerlrlhrgr alvrgpsslm
      421 kkaelsedqs pdalmeesst slaptilylt tfeapatees lilpvtslwp qahprpdgev
      481 mptldmalfd wtdyedlkpe vwpstkkkek hrgklssdgn etspakgepc dhhqdclpgt
      541 ccdlrehlct phnrglnnkc fddcmcvegl rcyakfhrnr rvtrrkgrcv epetangdqg
      601 sfinv
//
LOCUS       XP_061015760             468 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiA prenyltransferase domain-containing protein 1 [Dama dama].
ACCESSION   XP_061015760
VERSION     XP_061015760.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159777.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..468
                     /product="ubiA prenyltransferase domain-containing protein
                     1"
                     /calculated_mol_wt=49381
     Region          180..456
                     /region_name="PT_UbiA_UBIAD1"
                     /note="1,4-Dihydroxy-2-naphthoate octaprenyltransferase;
                     cd13962"
                     /db_xref="CDD:260125"
     CDS             1..468
                     /gene="UBIAD1"
                     /coded_by="XM_061159777.1:1..1407"
                     /db_xref="GeneID:133068839"
ORIGIN      
        1 mhlrsfprlg pgpspgprcr pvfpgglkva daqdggrggp gspgeavaar aralgraglg
       61 sgsrltqvtg grggaagppg vpgplaaapg srrllipvgg gteegqvrrp apsvlalart
      121 lrsgwltttd ntraasmaek inihagetak vedrdllgng cpqqdrlpqr swrqkcasyv
      181 lalrpwsfsa sltpvalgsa layrsqgvld prllvgcaia vlavhgagnl vntyydfskg
      241 idhkksddrt lvdrilepqd vvrfgvflyt lgcvcaacly clsplklehl aliyfgglsg
      301 sflytggigl kylalgdlvi litfgplavm fayavqvgsl avfpllyaip lalsteailh
      361 snntrdmesd reagivtlai ligptlsyvl yntllflpyl vfsilavhcs islalpllti
      421 pmafslerqf rsqtfnklpq ktaklnlllg lfyvfgiila pagslpkl
//
LOCUS       XP_061015761             686 aa            linear   MAM 02-DEC-2023
DEFINITION  mannan-binding lectin serine protease 2 [Dama dama].
ACCESSION   XP_061015761
VERSION     XP_061015761.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159778.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..686
                     /product="mannan-binding lectin serine protease 2"
                     /calculated_mol_wt=76154
     Region          25..136
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(27,29,31,58,63,105,131,133,135..136)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          152..180
                     /region_name="FXa_inhibition"
                     /note="Coagulation Factor Xa inhibitory site; pfam14670"
                     /db_xref="CDD:464251"
     Region          184..295
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(193,195,197,224,230,266,290,292,294..295)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          300..361
                     /region_name="CCP"
                     /note="Domain abundant in complement control proteins;
                     SUSHI repeat; short complement-like repeat (SCR);
                     smart00032"
                     /db_xref="CDD:214478"
     Site            order(310,329)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          366..429
                     /region_name="Sushi"
                     /note="Sushi repeat (SCR repeat); pfam00084"
                     /db_xref="CDD:459664"
     Region          444..681
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            444
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(482,531,632)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(626,653,655)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..686
                     /gene="MASP2"
                     /coded_by="XM_061159778.1:1..2061"
                     /db_xref="GeneID:133068840"
ORIGIN      
        1 mrllvflgll wgstaassgp qwpkpvfgrl aspgfpdkya nnqerrwalt appgyrlrly
       61 fthfqlepsy lceydfvkls agtkelatlc gsestdtera pgndtfrspg sslevtfrsd
      121 ysnekpftgf eafysaedid ecqvppgetp tcdhhchnhl ggfycscrvg yvlhrdkrtc
      181 salcsgqvft arsgefsspe ypqpypklss ctysihleeg fhvildfves fdvethpetl
      241 cpydslkirt dkaeygpfcg ktlpgrietn sntvtitftt dqsgdhmgwk vrysstaqpc
      301 pdplappngh ispvqakyil kdhfsvfcet gyellqgnlp lksfaaacqk dgswdrpmpe
      361 crivdcgppd nlpsgqveyi tgpavttyra vvkyrcdefy tmttndskyv ceadgfwtss
      421 kgekslpvce pvcgistrtt egriyggqna klgyfpwqal llgktmaaga llhdnwilta
      481 ahavydqred aaslqirmga lkrispnytq awaeaifihe syihdagydn dialiklknk
      541 vvinsnimpi clprkeaesf mrtndigtas gwgltqrgfl arnlkfvdip vvdhqkctaa
      601 yekksypegr vtdnmlcagl qsggkdscrg dsggalvfld netqkwfvgg ivswgsincg
      661 eadqygvytk vinyipwikr iinsnf
//
LOCUS       XP_061015762             241 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133068841 [Dama dama].
ACCESSION   XP_061015762
VERSION     XP_061015762.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159779.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 29% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..241
                     /product="uncharacterized protein LOC133068841"
                     /calculated_mol_wt=27504
     CDS             1..241
                     /gene="LOC133068841"
                     /coded_by="XM_061159779.1:1..726"
                     /db_xref="GeneID:133068841"
ORIGIN      
        1 mptsspitlr edkqsykygi iaklsiindh ltmiqeeflv vekpcdnade khyqkliisd
       61 ngalfedksk qskteeqrks rgqqaketvt wpaqgreapa ldsrlprhar pppgtpaskp
      121 tprarptpap ktrghncrqt praghsethl prmrytinge yimrnaglee aqagikiarr
      181 ninnfryadd ttlmaeseee lkrllmkvke lrealayriw klgntqvqrt tffmippfen
      241 i
//
LOCUS       XP_061015763             678 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: period circadian protein homolog 3 [Dama
            dama].
ACCESSION   XP_061015763
VERSION     XP_061015763.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159780.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 12% of CDS bases
            frameshifts          :: corrected 1 indel
            internal stop codons :: corrected 2 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..678
                     /product="LOW QUALITY PROTEIN: period circadian protein
                     homolog 3"
                     /calculated_mol_wt=74785
     Region          200..277
                     /region_name="PAS_3"
                     /note="PAS fold; pfam08447"
                     /db_xref="CDD:430001"
     Site            order(212,216,224,227..228,259,261)
                     /site_type="other"
                     /note="heme pocket [chemical binding]"
                     /db_xref="CDD:238075"
     Region          <561..659
                     /region_name="Period_C"
                     /note="Period protein 2/3C-terminal region; pfam12114"
                     /db_xref="CDD:463464"
     CDS             1..678
                     /gene="PER3"
                     /coded_by="XM_061159780.1:1..2037"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon;
                     substituted 2 bases at 2 genomic stop codons"
                     /db_xref="GeneID:133068842"
ORIGIN      
        1 mrspqaespa lqlaeaanrg prgrgrvtwr agvgvvpava whaagletar grvrwkglvv
       61 nlrtpggnqr helegpqasg peapgndaae lwrqkcelrs kfvqtsnseq qdrnrvseel
      121 imvvqemkkc fpserhgkps tldalnyalr cvhsvqanse sfqipsqnra pqadvtlcsl
      181 eelatiaseh tskntgrpfl gylpqdligt silaylhped rslmlavhqk vlkyagyppf
      241 ehlpirfcsq ngdyiildss wssfvnpwsr kvsfiigrhk vrtsplnkdv fatrvkkmts
      301 ddkditeiqe qiqklllqpi hgtmssgygs lgssrsqepq vslvsssess rprhgxgaeg
      361 tgeqltlqqi casvnkiknl gqqlciklra ksanrpmsga rsgrpgdeqd tcssfqtvkn
      421 nsiytesced lrkdqhspsy qqincidsvi rylksyhlpa lkrkcissan ttsssseedr
      481 qshraddvqa lqavsqisav paseiptngq stdaeggapw tlstatlsld tsqcssssvl
      541 vdipppdsvq vgnsqklpdy sseisqngqq sqdiqkketf pklaeesiwr mikqtpdcil
      601 mtyqvpervk evvlkedlee lesmrrqqpq fslgqteeia nvhsxirrrt ipqeidtqgi
      661 gfrtpggfqn prmfkplm
//
LOCUS       XP_061015764             623 aa            linear   MAM 02-DEC-2023
DEFINITION  coiled-coil domain-containing protein 27 [Dama dama].
ACCESSION   XP_061015764
VERSION     XP_061015764.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159781.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 16% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..623
                     /product="coiled-coil domain-containing protein 27"
                     /calculated_mol_wt=72549
     Region          369..>566
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     CDS             1..623
                     /gene="CCDC27"
                     /coded_by="XM_061159781.1:1..1872"
                     /db_xref="GeneID:133068845"
ORIGIN      
        1 mlpirasepk kkslvpnlie kglivlrkva srdeqapewk fsqqqrshsk saqaichyyk
       61 klrdfnqdas pqdsgfmsem eelrrkflkr pgcpqfstrs tsishygsam tlslpedtgv
      121 spetwkgaen llssqqgldv kvdgrllpls ksacefnylr kksesqvlsp tssspdlgqs
      181 yprkrvpwyi svihekevqr llemeaqvqk rqeeilalqe erealrkqlk cllkskslea
      241 vpshvlqewp sefvpklqgr qstlrtfrde edaehwrqlq eecdrgkele ggdyeeeehp
      301 egqakraadk gararasrre tlqenrseee aveeedkeev meldeekelq eeeamarrrg
      361 gfvddtfeee lmaqleeyeq viqefqfqle itrtryslat gaikslqrqv efqesqllki
      421 ntenemlqke lrerkkqlqa msdkfsnlre dkkyqemmgl iennnlllrq qvselesela
      481 krektilele akvnqlqdqv nqsqnhlqrw kqlqeemqnk nemiqhaeqq arealeyaqa
      541 rlerlrnkii qatfntigik nlateisdnd ileglqriis dridyynqlk qkgvkvpplq
      601 qmeilsspnk skkisskeaq lrp
//
LOCUS       XP_061015765            1458 aa            linear   MAM 02-DEC-2023
DEFINITION  tetratricopeptide repeat protein 34 [Dama dama].
ACCESSION   XP_061015765
VERSION     XP_061015765.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159782.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 26% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1458
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1458
                     /product="tetratricopeptide repeat protein 34"
                     /calculated_mol_wt=157139
     Region          <615..989
                     /region_name="COG3899"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443106"
     Region          936..>1304
                     /region_name="PEP_TPR_lipo"
                     /note="putative PEP-CTERM system TPR-repeat lipoprotein;
                     TIGR02917"
                     /db_xref="CDD:274350"
     Region          1068..1099
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          1104..1132
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          1197..1227
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          1232..1256
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..1458
                     /gene="TTC34"
                     /coded_by="XM_061159782.1:1..4377"
                     /db_xref="GeneID:133068846"
ORIGIN      
        1 mgwprhpsvr cppevalqgq awmlkrqasq eglgpaaphp cpshpirgdi setrskapss
       61 qslqkaaphp tptfacpcpr raahpasrtp qaasagrtkl cvergrallv pvcndhares
      121 gcrfdkvqra asrtrrprqt ksffhhilgd slnsgersrr pleaehpati aallpiirll
      181 svesahgfqg igavlsgrgv rhqkqssaer dpqlelvlae elqvptgaga nlentdspld
      241 wildrlrapd srevlclqfl pagsrdeklk fhlvtsrlsp tlvpgillvf ptsalvylaa
      301 tpqspgkrtr plnpgrlrep rsadppaeph lqplhlaapk sgwrgfsfra fpahpaqprs
      361 tgecervcrc cedghgpigv agvmsaqelv aclcregdqh lalgetplat afylaafsch
      421 apsalrsira alpetrgssv vatleawcrg dsqipaihwd gmavvsltgt lacaflatlc
      481 pdhpvaalhs lasllahghh gevvrrcgvl ldahsqqsle lrltralawv lsgtqvhtgv
      541 agylqafves adrtmafirm hqqpylpalv ralqdyiseh qeagdgasqq vtncqgllaa
      601 ldpggtwsit lspeallqhg ryedcraacs qaleaaptgc rpqgerlatl lvtraaatff
      661 ldsgaqdllr dlhqafresp sgarrqfqav lsagdrerlh aqvqeaadvg fshfqetvrs
      721 rpelredsgr ellvpvtqal rvlcrvappg arpalgarla eclllagdaa garalcerll
      781 rpsrtgdrag draplmalrg fcalhsgdsg saqedfqavv elgpphlsgc vralcgrgll
      841 rvlagsaflg aldyvtacrl gpeetllvtk tyvpwnqrgl lltvlreegr kmlqrrpepg
      901 pkswrgrrtk atetdspavq egdahgvhql atllmeldte deasrllaad alyrlgrldd
      961 thkallaals rrpqaapvlt rlallqlrrg fsynanqlvk kvvqsgdtac lqstlavfch
     1021 edrqllwghc hakalailra rpggaeggah treaiaylsl aifasgnrat esllararcy
     1081 gflgqkktam fdftsvlrae pgnaqalcgr allhlaldeq keavddilsa lrlsprtavp
     1141 eicslkpetq alitqslssh crallnqlpd tgarlndkda qnllaagkal ieidarqplw
     1201 hmlladalaa vgsfeeagah lqkvlhptpp seaararrgl lrlkkgdvva aaqdlqclae
     1261 mdaqdlgfll clleaserqs ltqaatqead tllnsgqprq algycslavl aggssnchlr
     1321 rratclaelr efsralgdld hvlregsrds nlqtqvedfc srgrlllglg deagaagafa
     1381 qalhlaptqa ksslwerpgr apathillcq arcclveqry seawtaaeag llldpghssl
     1441 krlkarirre assgcrlh
//
LOCUS       XP_061015766            1737 aa            linear   MAM 02-DEC-2023
DEFINITION  cilia- and flagella-associated protein 74 [Dama dama].
ACCESSION   XP_061015766
VERSION     XP_061015766.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159783.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1737
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1737
                     /product="cilia- and flagella-associated protein 74"
                     /calculated_mol_wt=193453
     Region          <48..315
                     /region_name="DUF5401"
                     /note="Family of unknown function (DUF5401); pfam17380"
                     /db_xref="CDD:375164"
     Region          <192..364
                     /region_name="DUF4670"
                     /note="Domain of unknown function (DUF4670); pfam15709"
                     /db_xref="CDD:464815"
     Region          <398..>522
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          713..>742
                     /region_name="choice_anch_D"
                     /note="choice-of-anchor D domain; NF012200"
                     /db_xref="CDD:467954"
     CDS             1..1737
                     /gene="CFAP74"
                     /coded_by="XM_061159783.1:61..5274"
                     /db_xref="GeneID:133068847"
ORIGIN      
        1 meedeklldd kplveddtee ledpevvldc vpreaeqkag lgsscpgieq skdkqklrlt
       61 aqkkmqasql rrdlrhldql heekdlfiqk trgelracrr rmellvkqqe smaaemaaer
      121 aannmaamgr leaalqrlcs elenerdlqa qmmavlqqne stlwqievqe gqledtrksa
      181 qeeaaaarrg lqeraakqlh remgasrkae rnrllrarrc vhlqkelglr qqklveeaqk
      241 nhrkalrflk aslgkireqq qkeeletreh mrrrmdavla lknsisanre tlrkfqawgq
      301 aktelaeqka qaekkailaq ggdafkhlch qrrrqeleaq nrafeeeqkr rkqeivsrll
      361 keeavedrrr prpepprptg qrslrdqtws yvatfcdgqs teappccplv sgcpgstgpc
      421 lpakisttes alapgpflpv plsalpswav ptctsccllp vvshlpttqs apallhggpf
      481 shlqqpqppp sslfqpdvpg qrpgpaqeqi kenrprsyqs splltaisse svqgdgsslg
      541 geedtlawpe ipglwkedyk pfqvakedvd rkpvggtkmd kdilarttqr lrsglihkqv
      601 asgrefrgcp fnskpkfihf kdfdvgkvyk kkitlinaty tinycklvgv eeslqdfvhv
      661 dfdppgplsa gmscevlvtf kpminkdleg nvsflaqtgr fsvplkcstk kcslsldkel
      721 idfgsytvge tairtitltn tgglgtkfrf llasescemd ttqsavklss ifiyedksfy
      781 dkittsfseh qtegnesspt dvpsqkesgk ldvkeqeegh piegvtltti mtippneeqm
      841 efslgeiteg digpfssikv pviftpivpg tvynsfkvvf knqqcptlyf kvvgvaidvp
      901 vwvpkpnvdl kicmydrlyq dsilvhtrsk aalrlkfevc kelrghmell petgyiqals
      961 sysvqlkflp rhslpedagk yfdketrvle apmtirvadq ikpvgftvha vvttsdlefs
     1021 pagldfgyct iyeairtqis lcnhsllpqe fgfvglpkfv diqpndgfgt ilpletlqld
     1081 vifqptkake ynfelickse inrcfklacr avgvypplel shhqikfaat slydtsvatl
     1141 yvinshqsmn slthsvprig sedafpvgpt sfefllppds pitisplvgt vwpgkrclvr
     1201 vafrpvlpse lihqeafqal srkaeiklsl ketvtqrkdq qrpsfsmlrl qnqdrllqas
     1261 asqppelqke dlasssqeyq laqaslirsf qgkfdkfvvp cvvasgdtkd rkgtemlsfs
     1321 phntlylelw cpavapsivv tsdkgktvin fgdiaaghrg ikkvsiqnis pedlnleysm
     1381 lnpdgpfvll nptmrlpsge tqvldlsfsp resilaqetl diitkkgtls lalmgtgvas
     1441 titcsiegdv lnmgyviare svslgfklqn nsllpikfsm qldslssrsr dqhrlpqfla
     1501 spdqrtevvg tqnysgqsvf svvpvkgime pgkaqdftvt fspdheslyf sdrlqvvlfe
     1561 kkvshcillk gaarehmmfv eggdpldvpv esltmipafd lehregeppp gppspeaeel
     1621 kpilvtldya qldpdtqapp atrelqvgci rttqlsakkt vefsmdniva lqhkgftiep
     1681 skgsvergqt kaisiswmpp idfdpdhplv asallqlrgd vketykvlfv aqvvtgp
//
LOCUS       XP_061015767             244 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 52 [Dama dama].
ACCESSION   XP_061015767
VERSION     XP_061015767.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159784.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 21% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..244
                     /product="transmembrane protein 52"
                     /calculated_mol_wt=25871
     Region          105..243
                     /region_name="TMEM52"
                     /note="Transmembrane 52; pfam14979"
                     /db_xref="CDD:464418"
     CDS             1..244
                     /gene="TMEM52"
                     /coded_by="XM_061159784.1:1..735"
                     /db_xref="GeneID:133068848"
ORIGIN      
        1 melrpthnpp geaseqgggf rlqrpgspla pccsqvpeap skdlwragfa lgaaqgrgph
       61 iaagppgslp lwapsmfsra padrgllllp pllplqqval gfvegscgps dqcppqarws
      121 slwhvglill talllllcgv sascvrfchl rkrahtqphl ppapepcdlt aipvnsdspv
      181 hstvtsyssv qcplgmqlpl pfgeldldtt tppayslyap epppsyeevi kmtktrqeep
      241 ppsl
//
LOCUS       XP_061015768             244 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: calmodulin-like protein 6 [Dama dama].
ACCESSION   XP_061015768
VERSION     XP_061015768.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159785.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 32% of CDS bases
            frameshifts          :: corrected 1 indel
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..244
                     /product="LOW QUALITY PROTEIN: calmodulin-like protein 6"
                     /calculated_mol_wt=26748
     Region          80..217
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..244
                     /gene="CALML6"
                     /coded_by="XM_061159785.1:1..735"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon;
                     substituted 1 base at 1 genomic stop codon"
                     /db_xref="GeneID:133068849"
ORIGIN      
        1 mpppplelnp qqlvchsags sqlaqtwqsc ygclveepqw agwvaqrelg qrprervgrp
       61 ldpgiswgca rrygapvtgq iqdykgvsem fdeegrgqvk mdeleqlmsf lginstksel
      121 astakdvdrv kkglfncsnf lalmgvxlek aqnqegelra afcvfdkeak gyidwdmiky
      181 vlmnvgeplk eveaeqmmke adengdgtld yegeqrmgpg tleagqsgra adlslcsqss
      241 chdd
//
LOCUS       XP_061015769             639 aa            linear   MAM 02-DEC-2023
DEFINITION  amiloride-sensitive sodium channel subunit delta [Dama dama].
ACCESSION   XP_061015769
VERSION     XP_061015769.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159786.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..639
                     /product="amiloride-sensitive sodium channel subunit
                     delta"
                     /calculated_mol_wt=71516
     Region          42..629
                     /region_name="ENaC"
                     /note="sodium channel transporter; TIGR00859"
                     /db_xref="CDD:273304"
     CDS             1..639
                     /gene="SCNN1D"
                     /coded_by="XM_061159786.1:1..1920"
                     /db_xref="GeneID:133068851"
ORIGIN      
        1 mqaegtgqtv gggpgtwtcs qappptlpke ergerlvelh tsfrelvtff ctnstihgti
       61 rlvcssqnrl ktaswgllla galgvlywqf allfeqywry pvimtvsvhs erklfpsvtl
      121 cdmnphrphl arhhlrvldd fareniysly qfnfsdsrda lgaevpgpep afqldrrirl
      181 qrlrpldgqn rvgfklcnst ggdcvqqays sgmvaaqewy rfhyinilal lptahedshg
      241 shfvfscryd drdchaqhfq tshhptygsc ytfnsvwath rpgvthrisl vlraeqqdhl
      301 pllstkagik vmihpqdhtp flehqgfsir pgtettidir edevhrlgsp ygqcmdstgs
      361 vdvqllynts ytrqaclvsc fqqlmvqtcs cgyffyplpa gaeycsymrh pawghcfhhl
      421 yqklkthqlp cttrcpqpcr essyklsagt srwpsstsad wvlavlgets rrnpwppsas
      481 ikswplplps spsractegp tsrsraqpls pvpcprisla kvnifyqeln yrmvnetpvy
      541 svsqllsamg slwslwlgss vlsvvevlel lldamaltll lccrwlrgsq gqpraatrvp
      601 plsqrptsgp vaagttsnap gpgclrlprc crdfsrslg
//
LOCUS       XP_061015770             804 aa            linear   MAM 02-DEC-2023
DEFINITION  inactive polyglycylase TTLL10 [Dama dama].
ACCESSION   XP_061015770
VERSION     XP_061015770.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159787.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..804
                     /product="inactive polyglycylase TTLL10"
                     /calculated_mol_wt=90316
     Region          354..655
                     /region_name="CPSase_L_D2"
                     /note="Carbamoyl-phosphate synthase L chain, ATP binding
                     domain; cl17255"
                     /db_xref="CDD:473076"
     CDS             1..804
                     /gene="TTLL10"
                     /coded_by="XM_061159787.1:376..2790"
                     /db_xref="GeneID:133068852"
ORIGIN      
        1 medpggscac ntplptlvip cprpqaslqp lpihllpsgp lghgcwetva wsplllpgqr
       61 ahttlwgsft kvfhssqqga vscgsfyltr pdssppysrp hsrvqrhrpp tnrpcrggla
      121 pdrqdaemal pprgtrpqsh hrdrnqtrvq hsrqhpsphr vgptgcpvqg lgpqvarrar
      181 rgvgamssqr ypcpgtpvsv arshthflhr rglpprtqvg tkrgkrsrma girrgharap
      241 gwaherpmgs hgqegllhql sqldqdaeld dseairpqat llekhflege kqppstgqgp
      301 ffyiggtnga siissycksk gwrriqdnrr edyklkwcev kcrdtycnfr egkqllyqlp
      361 nnkllttkig llsalrehsr vlsktskpah caqtkvlkme dffpetyrld irdereafft
      421 lfdetemwic kptasnqgkg ifllrnqeev ttlqaktqsi eddpiyrkmp frapqarvvq
      481 ryiknpllld gkkfdvrsyl liacampymv ffghgyarlt lglydphssd lsghltnqfm
      541 qkksplyvll kedtvwsmeh lnryindkfh ktkglprdwv fttftkrmqq ivahcflavk
      601 aklecklgyf dligcdflid enfkvwllem nsnpalhtnc evlkevipgv vmetldlale
      661 tfqkslrsek mlpllsqrrf vllhngetdl wpclggsrnv prpplpplrp tcdaaplepp
      721 llratdrpga rrpaphrdlg rgpgrpssaq rrprppvpap dgalsggpea qgggqprvgd
      781 edrvrelspg paeeerktag hrgs
//
LOCUS       XP_061015771             599 aa            linear   MAM 02-DEC-2023
DEFINITION  pleckstrin homology domain-containing family N member 1 [Dama
            dama].
ACCESSION   XP_061015771
VERSION     XP_061015771.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159788.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..599
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..599
                     /product="pleckstrin homology domain-containing family N
                     member 1"
                     /calculated_mol_wt=64704
     Region          80..173
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          212..328
                     /region_name="PH_PLEKHN1"
                     /note="Pleckstrin homology domain containing family N
                     member 1Pleckstrin homology-like domain; cd13323"
                     /db_xref="CDD:270132"
     Region          <319..594
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..599
                     /gene="PLEKHN1"
                     /coded_by="XM_061159788.1:1..1800"
                     /db_xref="GeneID:133068853"
ORIGIN      
        1 mgtqtclpal lredgarkla glfgteagad gnttadkifh yipgtnipgl qsqqeileqp
       61 flsvfkegrr raavrslgkv vhyakvqlrf qhsqnvsdcy lelfpshlyf qahgpegltf
      121 qgllplmels vcplegsreh afqitgplpa pllvlcpsqa eldhwlyhle kqialvggvp
      181 rcspeplqgp tedalprtlq hrltrlrtas ghqvmgsaic asrvklqhlp lqeqwdrllv
      241 lyptslaifs eeadglcfkg elplsaihin leerekqirs fliegrlint irvvcasyed
      301 yshwllclqt vchgdraspp pgpeslpglr astqvvvsgr gslssdarts wdsgcpapps
      361 tctthslpes saastagcpa qppseqanpg ctsvgghrak lrrggssrsp rnkpraekpg
      421 paallrldlt klsldsspea pdhsletphs plyadpytpp atshrkitdv qsldeflsvm
      481 qsslgpepss pfrsvpvsmp vsdsscglsg phflsekaap rarasrhhra sskgwgprpp
      541 dppqrvspek easpdpsppp pdggpprgys svqdealsps qwqgpqgtpe pergliqwi
//
LOCUS       XP_061015772             268 aa            linear   MAM 02-DEC-2023
DEFINITION  chymotrypsin-C [Dama dama].
ACCESSION   XP_061015772
VERSION     XP_061015772.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159789.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..268
                     /product="chymotrypsin-C"
                     /calculated_mol_wt=28973
     Region          30..265
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            30
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(74,121,216)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(210,236,238)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..268
                     /gene="CTRC"
                     /coded_by="XM_061159789.1:1..807"
                     /db_xref="GeneID:133068856"
ORIGIN      
        1 mlgitvftaf layasscgip ifqpnlsarv vggedaiphs wpwqislqyl kddtwrhtcg
       61 gtlitpshvl taahcisntl tyrvglgknn levedeagsl yvgvdtifvh ekwnsflirn
      121 dialiklaet velsdtiqva clpeagallt qdypcyvtgw grlytngpia aelqqglqpv
      181 vdyatcsqrd wwgstvketm vcaggdgvis acngdsggpl ncqaengnwd vqgivsfgsg
      241 lgcntykkpt vftrvsayid wineklql
//
LOCUS       XP_061015773             299 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat-containing protein 38 [Dama dama].
ACCESSION   XP_061015773
VERSION     XP_061015773.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159790.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..299
                     /product="leucine-rich repeat-containing protein 38"
                     /calculated_mol_wt=32622
     Region          43..61
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <44..>171
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          63..121
                     /region_name="LRR_8"
                     /note="Leucine rich repeat; pfam13855"
                     /db_xref="CDD:404697"
     Region          63..86
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          87..110
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          111..134
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          135..158
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          159..171
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          183..202
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          191..245
                     /region_name="LRRCT"
                     /note="Leucine rich repeat C-terminal domain; smart00082"
                     /db_xref="CDD:214507"
     CDS             1..299
                     /gene="LRRC38"
                     /coded_by="XM_061159790.1:1..900"
                     /db_xref="GeneID:133068857"
ORIGIN      
        1 mrpraaprap tgaaaaalgl fsfllllrpg hacpagcact dphtvdcrdr glpsvpdpfp
       61 ldvrkllvag nriqhipedf fifygdlvyl dfrnnslrsl eegtfsgsak lafldlsynn
      121 ltqlgagafr sagrlvklsl annnlagvhe aafetleslq vlelndnnlr slsvaalaal
      181 palrtlrldg npwlcdcdfa hlfswiqenv sklpkgldei qcslpmenrr iflhelseas
      241 fseckfslsl tdlfviifsg vavsiaaiis sfflatvvqc fqrcapnkdt ededededd
//
LOCUS       XP_061015774             469 aa            linear   MAM 02-DEC-2023
DEFINITION  PRAME family member 15-like [Dama dama].
ACCESSION   XP_061015774
VERSION     XP_061015774.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159791.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 47% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..469
                     /product="PRAME family member 15-like"
                     /calculated_mol_wt=53045
     Region          233..258
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          262..290
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          291..311
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          312..342
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          <313..400
                     /region_name="RNA1"
                     /note="Ran GTPase-activating protein (RanGAP) involved in
                     mRNA processing and transport [Translation, ribosomal
                     structure and biogenesis]; COG5238"
                     /db_xref="CDD:444072"
     Region          344..371
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          372..399
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..469
                     /gene="LOC133068858"
                     /coded_by="XM_061159791.1:1..1410"
                     /db_xref="GeneID:133068858"
ORIGIN      
        1 mslwapprll dlaaisllrn edlamsalef lpielfpplf meafygshsk tlktmvhawp
       61 fvrlplgglm elphlitlqa vldgldvlla qkehprrckl rvldlrntgq nfwsmwsgdi
      121 ehmsssslta pvpedrsrte qplaplevfv emslkewamd efltylmrwa eqrkdsihlc
      181 ckklkifgmp venimkvlsv vqldciqdie vnqnwhlssl atfapllgqm snvqrlilsv
      241 seeqeqhvvv qftsqflklh hlrdlclqsp fflsghldqm lrclvsplgn laithcllte
      301 sdlthlsqcp sisqlkgldl sgitladfsp ellqvlleqv adtlqeldln qceimdshie
      361 ailaalnhcs qlrslslcgn slsmaamekl lrhtsglpsl shefypaple syssqavlse
      421 erlaqlrael leilrdlghp rtiwlntiff asygyddysh leiieynpa
//
LOCUS       XP_061015775             460 aa            linear   MAM 02-DEC-2023
DEFINITION  PRAME family member 8-like [Dama dama].
ACCESSION   XP_061015775
VERSION     XP_061015775.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159792.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 58% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..460
                     /product="PRAME family member 8-like"
                     /calculated_mol_wt=52471
     CDS             1..460
                     /gene="LOC133068859"
                     /coded_by="XM_061159792.1:1..1383"
                     /db_xref="GeneID:133068859"
ORIGIN      
        1 msvqnplrll nlagktlltn ealaisaley lpielfpplf meafcgrhrk tlkalvqawp
       61 fvrlplgglm qtphvvtlqa vlegldvllt qkdrprrckl rvldlrntgq dfwrmwsgss
      121 vhvsssfsva pgaedrsste tvlapfevfi elhlkersmd gfliclmrwv eqrkasihlc
      181 ckrlrilsfs mdkimrvlsm vqldciqevy mnrswhlstl amfapllgqm snlqrllish
      241 inlpdpeeqe ehhivkitsq flrlhhlrdl hlespfylkg cldqmlrclm tpldnlgitr
      301 clltdsdlth lcqspnisql kglylsgvtm tysspellpa llekvsatlq elyleqcgir
      361 dshlesilhi lsrcfqlmsf slrgnllsma imekllrnts glprlskely papqesfssd
      421 gilqprrlaq sqtelleile dlghprtiwi iftplstlrr
//
LOCUS       XP_061015776             447 aa            linear   MAM 02-DEC-2023
DEFINITION  melanoma antigen preferentially expressed in tumors-like [Dama
            dama].
ACCESSION   XP_061015776
VERSION     XP_061015776.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159793.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..447
                     /product="melanoma antigen preferentially expressed in
                     tumors-like"
                     /calculated_mol_wt=50724
     Region          <193..>358
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     CDS             1..447
                     /gene="LOC133068860"
                     /coded_by="XM_061159793.1:1..1344"
                     /db_xref="GeneID:133068860"
ORIGIN      
        1 msvqnplrll nlagktlltn ealaisaley lpielfprlf meafygrhrk tlkalvqawp
       61 fvrlplgglm qtphvvtlqa vleglgillt rkdrpsssmv pmaedgsrie kplvpfevft
      121 elhlkertms efltyllkwv eqrdpfihly ckklkmvsfp mdnimkvlsm vqldciqelh
      181 vnctwhlstl amiapllgqm snvqklfvsh thlpdpeewn eqhtvkitsq flrlhhlqdl
      241 hlesrlyleg cldqmlrclm npldnlsiih clltdsdlth lsqspnisql kslnlsgatm
      301 tysspellps llekvsatlq elyleqsgir dshleailpa lshcfqltsf sthgnllsmp
      361 imekmlrhis elpslgrely tdpqesfssl gilqpgrlaq craelleilk dlgcprtiwi
      421 cftpcphhgd ntfyhpepii ygsnipg
//
LOCUS       XP_061015777             460 aa            linear   MAM 02-DEC-2023
DEFINITION  PRAME family member 8-like [Dama dama].
ACCESSION   XP_061015777
VERSION     XP_061015777.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159794.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..460
                     /product="PRAME family member 8-like"
                     /calculated_mol_wt=52523
     CDS             1..460
                     /gene="LOC133068861"
                     /coded_by="XM_061159794.1:1..1383"
                     /db_xref="GeneID:133068861"
ORIGIN      
        1 msvrnplrll nlagktlltn ealaisaley lpielfpplf meafcgrhrk tlkalvqawp
       61 fvrlplgglm qtphvvtlqa vlegldvllt qkdrprrckl rvldlrntgq dfwrmwsgss
      121 vhvsssfsva pgaedrsste kvlapfevfi elhlkersmd gfltclmrwv eqrkasihlc
      181 ckrlrilsfs mdkimrvlsm vqldciqevy vnrswhlstl amfapllgqm snlqkllish
      241 inlpdpeeqe ehhivkitsq flrlhhlrdl hlespfyleg cldqmlrclm tpldnlgitr
      301 clltdsdlth lcqspnirql kgldlsgvtm tysspellpa llekvsatlq elyleqcgir
      361 dshlesilri lsrcfqlmsf sllgnllsma imekllrhts glprlskely papqesfssd
      421 gilqprrlaq cqselleile dlghpriiwi sfmplstlwr
//
LOCUS       XP_061015778             410 aa            linear   MAM 02-DEC-2023
DEFINITION  PRAME family member 8-like [Dama dama].
ACCESSION   XP_061015778
VERSION     XP_061015778.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159795.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 65% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..410
                     /product="PRAME family member 8-like"
                     /calculated_mol_wt=45591
     CDS             1..410
                     /gene="LOC133068862"
                     /coded_by="XM_061159795.1:1..1233"
                     /db_xref="GeneID:133068862"
ORIGIN      
        1 msaynpprlv tlaamslvrd ealaissley lpmelypplf maafsgrhse tlkamvqawp
       61 farlplgglm qkphqgtiqa vlggldvlla qkvhprrckl qvldlrntgq dfwniwsgdm
      121 dhvsatslma pvakdmsrtk hpltplveve lsltqelstl akfasllgkm rnvqrlllsp
      181 ihgsvaeeqd hqalvqftsq ilrlqylqdl rmegpafleg rlnqmlrclk tslynisitn
      241 clltesdlih lsqcrnicql kglnlngvtl tnfrpellqv llekvagtle eldlnlcgim
      301 dshlmailpv lsscsqlrvl sicgnlisma vlerllrhtd glsdlslely papresyssl
      361 gilhqerlaq lkaelweilt dlgrprkiwv spspcphcgd dmcnhlspna
//
LOCUS       XP_061015779             435 aa            linear   MAM 02-DEC-2023
DEFINITION  melanoma antigen preferentially expressed in tumors-like [Dama
            dama].
ACCESSION   XP_061015779
VERSION     XP_061015779.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159796.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..435
                     /product="melanoma antigen preferentially expressed in
                     tumors-like"
                     /calculated_mol_wt=49208
     CDS             1..435
                     /gene="LOC133068863"
                     /coded_by="XM_061159796.1:1..1308"
                     /db_xref="GeneID:133068863"
ORIGIN      
        1 msvrnplrll nlagkslltd etlsisaley lpielfpplf meafcgrrrk tlkalvqawp
       61 fvrlplgglm qtphlgtlqa vldgldvlla qkdqprrckl rvldlrntgq dfwrmwsgss
      121 vhvsssssma pgaedrsrte qpsapfevfi elhlkersmd gfltylmrwv eqrkasihlc
      181 ckklriisss mdnimkvlnm vqldciqelh vnctwhlstl amfapllgqm snlqrllish
      241 ihlpdpkeqe eehvvkitsq flrlhclrdl qlespfyleg cldqmlrylm tpldnleith
      301 clltdsdlth lsqspnishl rgldlsgvtm tysssellpa llekiastlq elyleqcgir
      361 dshleailpa lshciqltcf nlcalsnplc wmrhlmtsev krhsfdlldp rhtlisgtgf
      421 eidgtgiala ppqil
//
LOCUS       XP_061015780             478 aa            linear   MAM 02-DEC-2023
DEFINITION  PRAME family member 8-like [Dama dama].
ACCESSION   XP_061015780
VERSION     XP_061015780.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159797.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..478
                     /product="PRAME family member 8-like"
                     /calculated_mol_wt=54271
     Region          <229..>389
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          235..267
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          268..293
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          294..317
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          321..349
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          350..377
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          378..402
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..478
                     /gene="LOC133068864"
                     /coded_by="XM_061159797.1:1..1437"
                     /db_xref="GeneID:133068864"
ORIGIN      
        1 msvptpprll dlagmhllre dalvcsalef lptelfpplf mdafhgrhik tlkamvqawp
       61 fvclplggli dlphvgplqa mlealdvlla qnvrsrrckl qvldlqntgq sfwrmwsgas
      121 thvvwsqhlg mapvaeqssr ihqplaplkv yielclkkrt ldnfltyllr wmeqrkasih
      181 lcckkltifa mpmenvtkvl nmvqldyiqe lqvnwiwhls tlakfapllg qmsnmqrlhv
      241 srihmssleq qeqqvvqfts qfpklhhlqd lyldspsfle gcldqmlrfl ktpldhlais
      301 nchltesdlt hlsqcpnihq lkgldlsgvt mtdfspeilh illeqvaatl qelnleqcgi
      361 tesqlesvlp vlsccsqlrt fslcgnvlsm aimekllsrt tglinlsdef ypapqesysp
      421 hgvlhlgqla qlrdklikii qdlgrpraiw lssspcprwc nktfypedpf lchcymsa
//
LOCUS       XP_061015781             476 aa            linear   MAM 02-DEC-2023
DEFINITION  PRAME family member 8-like [Dama dama].
ACCESSION   XP_061015781
VERSION     XP_061015781.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159798.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..476
                     /product="PRAME family member 8-like"
                     /calculated_mol_wt=53775
     Region          <227..449
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          233..265
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          266..291
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          292..315
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          319..347
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          348..375
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          376..400
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..476
                     /gene="LOC133068867"
                     /coded_by="XM_061159798.1:1..1431"
                     /db_xref="GeneID:133068867"
ORIGIN      
        1 msvltpprll dlagmhllre dalvcsalef lptelfpplf mdafhgrhik tlkamvqawp
       61 fvclplggli dlphvgplqa vlealdvlla qnvrsrrckl qvldlqntgq sfwriwsgas
      121 thgfsslgma pvaeqssrth qplaplkvyi elclkkrtld nfltyllrwm eqrkasihlc
      181 ckkltifamp venvmkvlnm vqldciqelq vnwiwhlstl akfapllgqm snmqrlhvsr
      241 ihmssleqqe qqvvqftsqf pklhhlqdly ldspsflegc ldqmlrclmt pldhlaitnc
      301 rltesdlthl sqcpnirqlk gldlsgvtmt dfspeilhil leqvaatlqe lnleqcgite
      361 sqlesilpvl sccsqlrtfs lcgnvlsmai mekllshttg linlsdefyp apqesysphg
      421 vlhlgqlaql wdklikiiqd lghpraiwls sspcprwgnk tfypedpflc hcymsa
//
LOCUS       XP_061015782             477 aa            linear   MAM 02-DEC-2023
DEFINITION  PRAME family member 8-like [Dama dama].
ACCESSION   XP_061015782
VERSION     XP_061015782.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159799.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..477
                     /product="PRAME family member 8-like"
                     /calculated_mol_wt=54143
     Region          138..>402
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     CDS             1..477
                     /gene="LOC133068868"
                     /coded_by="XM_061159799.1:1..1434"
                     /db_xref="GeneID:133068868"
ORIGIN      
        1 msvhtpprlv dlagmrllrd ndldfstles lpielfpplf leafhgrrve tlkamvqtwp
       61 fvrlpvgali dpphvgplqa mlealdalla qkvrsrrckl rvldlrntgq nfwnmwsgas
      121 sygcsssrma qvteprsmtk qhlaplkvfi dlclkektld nfltyflwwv eqrkssihlc
      181 ckklkiismp mdnivkilsm vqlgciqemq vsctwnlstl atfapflgem cnlqrlvlfp
      241 ihvsafkkqe ehhivqitsq flklghlrdl hlespsfleg hldqmlrclk spldslsiis
      301 cwltesdlth lsqspdisql ksldlsgvtm tdfkpellqf llekvaanmq eldfdmcgim
      361 dsqleaslpa lsrcsqlrsf slcgnllsta gmekllqhtt vlpclrqery papqetyrpw
      421 gvllearlaq lraqlleilr dlgrlriiwi slspcprcde avchhmepii yscpapa
//
LOCUS       XP_061015783             477 aa            linear   MAM 02-DEC-2023
DEFINITION  melanoma antigen preferentially expressed in tumors-like [Dama
            dama].
ACCESSION   XP_061015783
VERSION     XP_061015783.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159800.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 88% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..477
                     /product="melanoma antigen preferentially expressed in
                     tumors-like"
                     /calculated_mol_wt=54222
     Region          <315..>450
                     /region_name="PPP1R42"
                     /note="protein phosphatase 1 regulatory subunit 42;
                     cl42388"
                     /db_xref="CDD:455733"
     CDS             1..477
                     /gene="LOC133068869"
                     /coded_by="XM_061159800.1:1..1434"
                     /db_xref="GeneID:133068869"
ORIGIN      
        1 msvqnplrlq nlagkslltd ealaistley lpielfpqlf meafcgrhrk tlkalvqawp
       61 fvrlplgglm qtphlgtlqa vldgldvlla qkdqprrckl rvldlrnsgq dfwrmwsgsk
      121 ihvsssssmv pcavdslrae kplapfkvfi elhlkersmd gfltyllkwv eerkasihlc
      181 ckrlrilsfp menimkvlsm vrldciqevh vnctwylptl amfapllgqi skvqrllish
      241 ihlpapmeqd kqhvvkitsq flrmhhlrdl hlespfyleg cldqmlrclm tpldtltitr
      301 clltdsdlth lsqspkisql kglnlsgvtm tysspellpa llqkvsatlq elyleqcgir
      361 dfhlefllpa lslciqltsf slrgnflsma tmekmlrhts gmlsssrely tvpqeslscq
      421 gilqpsrlaq crtelleilk dlgrprtiwi cftpcphcgd ntfyhpepii yssntlt
//
LOCUS       XP_061015784             472 aa            linear   MAM 02-DEC-2023
DEFINITION  PRAME family member 12-like [Dama dama].
ACCESSION   XP_061015784
VERSION     XP_061015784.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159801.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..472
                     /product="PRAME family member 12-like"
                     /calculated_mol_wt=53537
     Region          <262..>407
                     /region_name="PPP1R42"
                     /note="protein phosphatase 1 regulatory subunit 42;
                     cl42388"
                     /db_xref="CDD:455733"
     CDS             1..472
                     /gene="LOC133068870"
                     /coded_by="XM_061159801.1:1..1419"
                     /db_xref="GeneID:133068870"
ORIGIN      
        1 mslqtrprll nlaavsllrd easaitaley lpielfpplf meafcgsrse tlkamvyawp
       61 fvrlplgglm qkphmgtlqa vldgldilia qkkhskrckl rvldlrntgq dfwkmwsgss
      121 vhvsssssmt pvaevrsrte qplaplevfi elhfkesttd dfliyltrwv eqrkasihlc
      181 snklkvtsms lenivqvlgi vqldciqeve vnciwhlstl amfalflgqm sniqrlhlsh
      241 ihglaieeee eyyhivqiis qfrklyhlrd lyletpsfle gclnpmlrcl mtpldnlait
      301 hslltdsdlt hlsqcpnisq lkgldmsgdl ltysnaells vllekvagtl etldlnmcgi
      361 rdfhleailp alshcfqlks fsmrgnilsm aimekmlrht stlpslnkel ypvpqslqsr
      421 gihqpqrlaq craelfeilk dlgrprtiwi ssiscpqceg hafyhpepii yq
//
LOCUS       XP_061015785             442 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: putative PRAME family member 26 [Dama dama].
ACCESSION   XP_061015785
VERSION     XP_061015785.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159802.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 38% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..442
                     /product="LOW QUALITY PROTEIN: putative PRAME family
                     member 26"
                     /calculated_mol_wt=49969
     CDS             1..442
                     /gene="LOC133068871"
                     /coded_by="XM_061159802.1:1..1329"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 2 bases in 1 codon"
                     /db_xref="GeneID:133068871"
ORIGIN      
        1 mvrawpfvhl plgglmhtph kgtveailgg lnallthkvh prrrklwvln lrntgqnfws
       61 mwsgdmdhgs ssslmapvse gslrkgrplt plevfielcl kertmdeflt ylirwiadrk
      121 dlihlcckkl miesipfkni mkflhlmpld slqevqvnci wqlstlslfa pllgqmrsvq
      181 rlilshscvs afeeqeqqvv qftsqflklh hlrdlsmecp fflrgcldqi lrclktglen
      241 ltimhcllte sdlthlsqcp sisqlkgldl sgvvvtnfrs avlqillekv aatvwelgld
      301 ecaildsqle avlpalslcf qlrsfslrgn ilsmaamekl llhtaglpnl skefypapre
      361 syssqgvllq grlaqlqagl keilkvlgqp rtiwlssspf fhcsddifyh mepiayhcns
      421 saflmpltka fleikfrysg iv
//
LOCUS       XP_061015786             477 aa            linear   MAM 02-DEC-2023
DEFINITION  PRAME family member 8-like [Dama dama].
ACCESSION   XP_061015786
VERSION     XP_061015786.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159803.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 12% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..477
                     /product="PRAME family member 8-like"
                     /calculated_mol_wt=53595
     Region          <220..>388
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     CDS             1..477
                     /gene="LOC133068872"
                     /coded_by="XM_061159803.1:1..1434"
                     /db_xref="GeneID:133068872"
ORIGIN      
        1 msvrtppsll dlagmhllrd ddlafsaleq lpvelfpplf teafngrhtn ilkamvqawp
       61 fvrlplggli dlphvgplqa vlealdvlli qkvcsrrckl rvldlrdtgh nfwsmwsgas
      121 ahrctssgra pvpeprsvtk qhvaplkvfi dlslkkrtld nfptyllrwv eqrkasihlc
      181 ckklkisamp mdnivkvlsm vqldciqevq vsctwnlstl atfapflghm snlqrlrlfp
      241 iqvsafrkqe hdlavqitsq flrlghlrdl hlespsfleg rldqmlrclt ttldnlsitn
      301 cqlmesdlth lsqcpnicql kslelngvtl tdfnpellqv llekvaatlq elyldqcgir
      361 nsqfeailpa lsrcsqlrsf slcgnllsma vmekmlrqta glsclsqewy papqesyspq
      421 gvpldgrlpq lqaelleilr dlgqprtvwl tfspcphcgd dicthmepii ysctnpa
//
LOCUS       XP_061015787             477 aa            linear   MAM 02-DEC-2023
DEFINITION  PRAME family member 8-like [Dama dama].
ACCESSION   XP_061015787
VERSION     XP_061015787.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159804.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..477
                     /product="PRAME family member 8-like"
                     /calculated_mol_wt=53895
     Region          <227..>388
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     CDS             1..477
                     /gene="LOC133068873"
                     /coded_by="XM_061159804.1:1..1434"
                     /db_xref="GeneID:133068873"
ORIGIN      
        1 msvrnpsrll dlagkhllrd dalafsvled lptelfpplf meafhgrhie tlkamvqawp
       61 fvrlplggli dmphmgplqa vlealdglla qkvrsrkckl qvldlrntgq nfwsmwsgas
      121 syecsssrma pvaeqssmak qhlaplkifi dlclkkrtlg nfltyllrwv eqrkasvhlc
      181 ckklkisamp mdnivkvlsm vqldciqevq vnwiwhlstl atfasllgkm snlqrlrlsp
      241 ihlsafteqe qdhlaqitsq flrlghlqdl hldypsfleg cldqmlrclk shldnlsitn
      301 cwltesdlth lsqspnisql kgldlsgitm tdfnpellrv llekvaatlq eldldlcgik
      361 dsqleailpa lsrcsrlryf slcqnflsma vmekllrhtt glpcltqery papqesyrsq
      421 gvllearlaq lraqlleilk dlgrprviwi spspclrcge nicyhlepii ysctasa
//
LOCUS       XP_061015788             476 aa            linear   MAM 02-DEC-2023
DEFINITION  PRAME family member 8-like [Dama dama].
ACCESSION   XP_061015788
VERSION     XP_061015788.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159805.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 42% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..476
                     /product="PRAME family member 8-like"
                     /calculated_mol_wt=53625
     Region          60..404
                     /region_name="RNA1"
                     /note="Ran GTPase-activating protein (RanGAP) involved in
                     mRNA processing and transport [Translation, ribosomal
                     structure and biogenesis]; COG5238"
                     /db_xref="CDD:444072"
     CDS             1..476
                     /gene="LOC133068874"
                     /coded_by="XM_061159805.1:1..1431"
                     /db_xref="GeneID:133068874"
ORIGIN      
        1 msvltpprvl dmagmhllre dalvcsalel lptelfpclf mdafhgkhik tlkamvqawp
       61 fvclplggli dlphvgplqa vlealdvllv qkvrsrrckl qaldlrntgq nfwsmwpgas
      121 thgfsslgma pvaeqssrih qplaplkvyi elclkkrtld nfltyllrwv kqrkasihlc
      181 ckkltifamp venimkvlnm vqldciqevq vnwiwhlsal akfapllgqm snmqrlnlsr
      241 ihvsaheeqe qkvvqftsqf lklhhlqdls lhapsffegc ldqmlsclrt pldhlaitnc
      301 qltesdliyl sqclnicqlk gldlsgvtmt dfspeilhvl leqvaatlqe lnleqcgipe
      361 sqlefilpil sccsqlrtfs lcgnvlsmai mekllshttg linlseefyp apqesysphg
      421 alhlgqmaql qdklikimrd lghpraiwls sspcprwgnk tfypedpflc hcymsa
//
LOCUS       XP_061015789             509 aa            linear   MAM 02-DEC-2023
DEFINITION  PRAME family member 8-like [Dama dama].
ACCESSION   XP_061015789
VERSION     XP_061015789.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159806.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..509
                     /product="PRAME family member 8-like"
                     /calculated_mol_wt=57401
     Region          336..362
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          363..387
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          388..418
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          420..446
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          447..470
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          476..503
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..509
                     /gene="LOC133068877"
                     /coded_by="XM_061159806.1:1..1530"
                     /db_xref="GeneID:133068877"
ORIGIN      
        1 msllrdeala icsleylpme lypplfmaaf slrrsetlma mvqawpfgrl plgglmkrph
       61 qetleavldg ldvllaqevh srksklrvld lrntgqdfwn mwsgdkyhes ssslmalmak
      121 dmsgtkhpla plevyvdlcl kektwgkfit ylfrwveqrk gsihlcckkm kiisrsketi
      181 kkvfrivkld ciqevelnft qklstlakfa sllgkmsnvq rlllspihgs aveeqdqqal
      241 lrftsqilrl qhlrylrmeg psfleghlnq mlrclkiply nisitncqlt esdlthlsqc
      301 peicqlrgln lsgvtltnfh pkliqgllek vadtveelnl nvcgimdsll tallpalscc
      361 sqlrvlsmcg nlismavles llrhthglsa lrlefypapr esysslgcld qmlrclrtpl
      421 dhlaitkcwl tesdlthlsq cpdllqlkgl dlsgvtminf steilhvlpk qvaatlqeln
      481 leqcgitesq lesilpvlsc csqlrsfsl
//
LOCUS       XP_061015790              73 aa            linear   MAM 02-DEC-2023
DEFINITION  small ribosomal subunit protein uS14-like [Dama dama].
ACCESSION   XP_061015790
VERSION     XP_061015790.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159807.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 17% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..73
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..73
                     /product="small ribosomal subunit protein uS14-like"
                     /calculated_mol_wt=8563
     Region          23..73
                     /region_name="PTZ00218"
                     /note="40S ribosomal protein S29; Provisional"
                     /db_xref="CDD:185518"
     CDS             1..73
                     /gene="LOC133068878"
                     /coded_by="XM_061159807.1:1..222"
                     /db_xref="GeneID:133068878"
ORIGIN      
        1 mrtlsrsfyl vatekatwvt kqlywshprk fgqgsrscrv csnrhglirk yglnmcrqcf
       61 rqyakdigfi kld
//
LOCUS       XP_061015791            1114 aa            linear   MAM 02-DEC-2023
DEFINITION  sodium/hydrogen exchanger 11 [Dama dama].
ACCESSION   XP_061015791
VERSION     XP_061015791.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159808.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1114
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1114
                     /product="sodium/hydrogen exchanger 11"
                     /calculated_mol_wt=127859
     Region          35..>437
                     /region_name="NhaP"
                     /note="NhaP-type Na+/H+ or K+/H+ antiporter [Inorganic ion
                     transport and metabolism]; COG0025"
                     /db_xref="CDD:439796"
     Region          878..985
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(953..954,963..965)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     CDS             1..1114
                     /gene="SLC9C2"
                     /coded_by="XM_061159808.1:1..3345"
                     /db_xref="GeneID:133068879"
ORIGIN      
        1 mskanvsfwv qkegnrpdll cgraadypvv kghflilvws tlvlggllra flknsdvivl
       61 tilslfglli gqlaydfvem hqivypllrt ssfslycyfs pliifmaald vdfyilknvf
      121 wqvfltglis fatafiiigy vvlkfnkhsw dlescllfsm algitdpiys vnslktigis
      181 kmytdiirge smiicgftsi ffsvfqrgil qmsnfrelhv ivgltldilg sivcgywcar
      241 iiqfiltdlf sntltniifc ismvymtfyi veflgmsgtv alatvglnld slsfkprikl
      301 iitkflimfs cifqhliytf fgivigcgqi kdfqfhtvvf msilfvtvnf vrfvtvvlvs
      361 pilmhssyey nwrwgiviaw sgikgvfsll fapevhnlae ervespelfi lyiqvislmt
      421 lginsymmtr lartldlcal siprqmamqn aikhiqemiq sritlfktek lltnvnwtlv
      481 eektkieyii ptphvssdnk akeefptdev lleearlhvv miqissfekq cndgvlsvea
      541 artligatks ychiqgkfms iydvstyvra rswlvkfkht ltfleyhkdk tsailyghnr
      601 flifiyhivf seefenaehi igimyiypmi mhlwptarkl nvsglifvny yfvclylles
      661 alkiiilkkk yfhqhwntle ffiviigivd vfciyfvrlr pdnliliqft viigyfriir
      721 ffpllkiiip llinivdvqi kkrlsltysi tkgyvksled tkflirqiss rksidqklye
      781 iletnkqdav kelglieheg rdvvialktk qairnviaka lksltflssr giidkyesle
      841 mnkvllekik slnnfpmaip lptpdkylhn iiwlenkdal ieffkerakl ayfdygdvic
      901 kegempqgiy liisgmaile sspptfgidr slrpdrestt rfteyctsgd vigelscllk
      961 reieytaice tilqacfisl edlyegfdff wpsleykiwl klalsiayqy fesslvdedl
     1021 kfqkcvtlnh ayvetlssyn emsidnvnmk fvilvygsvi dtktevpyfa pcilpktceq
     1081 vqgtsdlskl lviqapapdk nddnakvmgk gval
//
LOCUS       XP_061015793             976 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: tudor domain-containing protein 5 [Dama dama].
ACCESSION   XP_061015793
VERSION     XP_061015793.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159810.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 2% of CDS bases
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..976
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..976
                     /product="LOW QUALITY PROTEIN: tudor domain-containing
                     protein 5"
                     /calculated_mol_wt=109313
     Region          4..98
                     /region_name="LOTUS_1_TDRD5"
                     /note="The first LOTUS domain on Tudor-containing protein
                     5 (TDRD5); cd09985"
                     /db_xref="CDD:193599"
     Region          132..201
                     /region_name="LOTUS_2_TDRD5"
                     /note="The second LOTUS domain on Tudor-containing protein
                     5 (TDRD5); cd09975"
                     /db_xref="CDD:193589"
     Region          <331..375
                     /region_name="LabA_like_C"
                     /note="C-terminal domain of LabA_like proteins; cl14879"
                     /db_xref="CDD:472713"
     Region          482..599
                     /region_name="Tudor_TDRD5"
                     /note="Tudor domain found in Tudor domain-containing
                     protein 5 (TDRD5) and similar proteins; cd20419"
                     /db_xref="CDD:410490"
     Site            order(542,549,566,569,571)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410490"
     CDS             1..976
                     /gene="TDRD5"
                     /coded_by="XM_061159810.1:1..2931"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /db_xref="GeneID:133068880"
ORIGIN      
        1 mseqeriqec lrkeirslli stkdgltpqq lekeyllmvg nhlplrilgy rstmelvldm
       61 pdvvsvcpcg dgtvilkaip destkgianl vakqksnhkv gnsvqkgras vcsgpssrqr
      121 vpyrgrvppi lpavvkselk dllalspvll sdfekafanr fgrsfqyvqy gflsmfevln
      181 aasdvisveq tragslltlk ksvseekqrg wpagkhiskg kiftqpfrmk qqgscpigfp
      241 vakacfsqpa snmeppkqil gmerntrsnv metsrlnqse klnqinterl qddiygyian
      301 nkslakkhka mytlkxftqs pmvcclfnes lifkeqlspk klgflnviel vgalsdilhv
      361 efregqqdll vfdadmkpla svqsdkkiea kacvsspprn slstaiiket twdcpsknhk
      421 epeqkifkkp nlvvkplqlq veinksqlnl amanhdippd avrdkklcrl ppldtstlvg
      481 vfveyiisps qfyiriysrd sselledmmi emrrcysnql vsdryampec fiqpghlccv
      541 risedkwwyr viihrilgrq evevfypdfg nigtvqkssl rflkccytkl paqaipcsla
      601 wvrpveehwt prailqfqkl cglkplvgvv deyvdgilni flcdtssned vyfhhvlrte
      661 ghaivcrenv pskgfrdlnp lalytkssvr pedivlkelg yssqqhyfne dreispqske
      721 sdlytldeip tgmpclesvt igddiwdenw lplqakmgke sdaashlfts slggkkpyss
      781 rkelpqkdwc fstpkdiwdd swqpsglvng mkevqipegl ggqekhidtt rvqkqpnvks
      841 asdspmlpkl eefyisliqs qqsaessqfe pssiqtppkq iqlsstpalv tsgsvegspk
      901 slenedfsss saitvfkdts qgavdqlsli lspehqisqk lyiprstata algaaarlat
      961 sksllhwyps vkkvet
//
LOCUS       XP_061015794             582 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized protein LOC133068896 [Dama dama].
ACCESSION   XP_061015794
VERSION     XP_061015794.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159811.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 47% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..582
                     /product="uncharacterized protein LOC133068896"
                     /calculated_mol_wt=62464
     Region          <108..244
                     /region_name="PTZ00436"
                     /note="60S ribosomal protein L19-like protein;
                     Provisional"
                     /db_xref="CDD:185616"
     Region          299..548
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     CDS             1..582
                     /gene="LOC133068896"
                     /coded_by="XM_061159811.1:1..1749"
                     /db_xref="GeneID:133068896"
ORIGIN      
        1 msgqsgmpqv qtavlrgvwp tvtrclglgf ypqvdaldsl iqtsrkgtmm tapaldsfpp
       61 slrrvitvcs prggepnipa esprlsfrsa grgtrhpmcr rrrtdvcapk gnplqrrapl
      121 lqargpplqr rapplqahgp plrahgpslr vqgpalqahg rplqcrdrps sigtappgag
      181 tappgagtap kaqgpplqar drpsrvgtap pgagtapgae appcsppigp arpsprprhg
      241 patpsallrr tpcesgdccr lsyraspllv aprvpffwcl vgmllvvlvf llptvseacg
      301 dpprfdtmrl qgapkpnyrp gecvqyecrl gfkpkvptlp rsavcqdnnt wsslqdacve
      361 kscpnvgepv ngqvnfvngs alfgsqvhfa cnpgfyliga kilyceisgd nvawsdnipi
      421 ceiivcaapg nitngrftvy kevyqysevv mykcnpsngp deysligett licvdhnrws
      481 sappeckvvk cdypiveygt iasgvrrkyy ynaqvvfqch dgfylhgsst vvcgangtwe
      541 pelpkctkea iatttvstts sasgfikscl ylsisfkflv if
//
LOCUS       XP_061015795            1391 aa            linear   MAM 02-DEC-2023
DEFINITION  protein crumbs homolog 1 [Dama dama].
ACCESSION   XP_061015795
VERSION     XP_061015795.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159812.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1391
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1391
                     /product="protein crumbs homolog 1"
                     /calculated_mol_wt=148219
     Region          131..166
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(131,134,148)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          170..205
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          208..243
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          245..282
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(245,248,262)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          289..320
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          380..>407
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(380,383,397)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          468..633
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cd00110"
                     /db_xref="CDD:238058"
     Region          660..691
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          727..844
                     /region_name="Laminin_G_2"
                     /note="Laminin G domain; pfam02210"
                     /db_xref="CDD:460494"
     Region          875..904
                     /region_name="EGF"
                     /note="EGF-like domain; pfam00008"
                     /db_xref="CDD:394967"
     Region          936..1084
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cd00110"
                     /db_xref="CDD:238058"
     Region          1125..1159
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          1282..1318
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(1282,1285,1299)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..1391
                     /gene="CRB1"
                     /coded_by="XM_061159812.1:1..4176"
                     /db_xref="GeneID:133068897"
ORIGIN      
        1 mlmignrsfc nkndtkcvsd scqsnstckd fskdkscrcs dtavhadkdc geeedpclss
       61 pcpghatcvr vpgerrslcr cppghsgagc dtsagpcgpr sclhggachq dpgppvcvcp
      121 agytgrfcel dldecasspc lhgavcrdgg dgyfcfcvpg yqgrrcdvev decvsepcrn
      181 aatclneigr ytcvcprgfs gvncelevde crsqpclnga tcqdvvgayl cdcapgflgd
      241 rcelntdeca sgpclhgglc vdganrysct cagsgftgtr cetlmppcss epchnnatce
      301 dradsyachc qpgytgvqce tdldgcgsgp cqaggqcvel ssetarerla qlqsasgrpe
      361 asgyvcvcpp gltgvhceed vdecssspcr nggtcenspe gytchcpldp rsgvvyggrd
      421 csdtllgcad rpclnngtcv phvhdgrhgf dclcpaghtg srcgtvttls fegsgflwvp
      481 sgsapardsg ctvalrfqtv qpaalllfrg drdafvmlev lagfvhltlq vgdrpkvvll
      541 ipqdtsdggw haveatfaea vtlalgddac sgaciasaps pferdgssac tlqnsflggl
      601 pegsahsgda llhvyeipsa pslvgclqdv qldsnavtae nissdaalnv ragctrkdwc
      661 esqpchnrgr clnlwlghrc ecrrpyrgrn chgeyvagrf gqddspgyav fhlgkdyeed
      721 ltlsmfvrtr rpsglllalg ngtyqhlrvr lehgrlavlt pgspkllvtf vlsdgqvrlv
      781 slkikpnkie lyqssqnlgf lsaptwklqr gdvlyvgglp drqetevsgg ffkgciqdir
      841 lnnenleffp nstgsaahsa vlvnvtegcp gdnlcepnpc hhggvcyllw ddfscscpan
      901 tagkacqelr wcelgpcppg aqclqlprgf ecianavlng qsreiifrss gnitreltni
      961 tfgfrtrdah viilraekep eflrihirds rllfqlrsgn sfytlsltsl qpvsdgvwhq
     1021 atvsmtdpga qasrwqmevd gqtppvtsav aagslgflkd dtdiyvgdra sdsaraprgc
     1081 lstiaisgly lsylgnvrgl msrpqegrfl kvsvravetg cpqldacrsg pclhggrced
     1141 tysahrctcp agrsgphcel avdaclsspc ihgncsargg aayhcrcepg ftgvncesev
     1201 dgcqrhqcan gatcvsdatg yscrcpgnft grfcrylrlp stvcgnektn ltcynggnct
     1261 efqgemkcac wpgftgercd mdidecasdp clhggrcqdl lggfrcacal afagprceld
     1321 laddllsdvf aaigsvtlal llilflavva svvtsnkrat qgsyspsrqe kdgsrvemws
     1381 mmdapaaerl i
//
LOCUS       XP_061015796             707 aa            linear   MAM 02-DEC-2023
DEFINITION  collagen alpha-1(II) chain-like [Dama dama].
ACCESSION   XP_061015796
VERSION     XP_061015796.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159813.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..707
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..707
                     /product="collagen alpha-1(II) chain-like"
                     /calculated_mol_wt=74016
     CDS             1..707
                     /gene="LOC133068898"
                     /coded_by="XM_061159813.1:1..2124"
                     /db_xref="GeneID:133068898"
ORIGIN      
        1 mpspgegarr praarqprgg erraaspapa rgrrlqpagr aggggaagaa rrerlltlhv
       61 frhlplvpmr psqsqgfrlh fgqhdkaaar graapqpppn reeeaagter rprpgagarl
      121 gegaaaggag arpaelpars ggggraaaaa aapgrlgsat rtppsardpq glplarslas
      181 vssplrpspv saslpltlwr gvgssnlppp prplpsgrgp lqprgsetgg ggeggeedrv
      241 geagmrgedr gwgrgfrtrv gpqapaneee aqasrplaap tssprlapsh parpgagdvr
      301 aaglraaerr plsergeagw rcrreegkpa gvrplcapge glqgelnafq qarrekkswp
      361 aleglrapfp salslqspph pprgaqrrgp palegtaasp rawheppgmh lsphkrerrq
      421 cqkggpgqgf lksalkrmrr rvtaerfrla lklvsrltar pgqlraqrap nakealdpek
      481 tslpenprpr glvpgtgper gvprarampi ppgdvepppl vdkagnlpqe kaegtvifpr
      541 gaprgvwaag aeggaagrlh pgsgrtlplr alppvlarsi lrgrgpppep gtrspcdlgw
      601 awasprtpwr kqsagrrrpa rprcrgylgm vpggsgrsar rgyggradaw kggevglrgr
      661 awvvyssrpg gsalsevyth rlgitkpgpa grrlppsard vspaasr
//
LOCUS       XP_061015797            1872 aa            linear   MAM 02-DEC-2023
DEFINITION  voltage-dependent L-type calcium channel subunit alpha-1S [Dama
            dama].
ACCESSION   XP_061015797
VERSION     XP_061015797.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159814.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1872
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1872
                     /product="voltage-dependent L-type calcium channel subunit
                     alpha-1S"
                     /calculated_mol_wt=211003
     Region          50..345
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          431..672
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          798..1075
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          1117..1392
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          1401..1454
                     /region_name="GPHH"
                     /note="Voltage-dependent L-type calcium channel,
                     IQ-associated; pfam16905"
                     /db_xref="CDD:465306"
     Region          1464..1536
                     /region_name="Ca_chan_IQ"
                     /note="Voltage gated calcium channel IQ domain; pfam08763"
                     /db_xref="CDD:462591"
     Region          <1615..>1781
                     /region_name="PHA03378"
                     /note="EBNA-3B; Provisional"
                     /db_xref="CDD:223065"
     CDS             1..1872
                     /gene="CACNA1S"
                     /coded_by="XM_061159814.1:1..5619"
                     /db_xref="GeneID:133068899"
ORIGIN      
        1 mepspaqdeg lrrkqakkpv pevlprppra lfcltlqnpv rkacisivew kpfetiillt
       61 ifancvalav ylpmpeddsn rlnlglekle yfflivfsie aamkiiaygf lfhqdaylrs
      121 gwnvldfiiv flgvftvile qvnliqsnta pmsskgagld vkalrafrvl rplrlvsgvp
      181 slqvvlnsif kamlplfhia llvlfmvviy aiiglelfkg kmhktcyfig tdivatvene
      241 kpspcartgs grpctisgse crggwpgpnh githfdnfgf smltvyqcit megwtdvlyw
      301 vndaignewp wiyfvtlill gsffilnlvl gvlsgeftke rekaksrgtf qklrekqqld
      361 edlrgylswi tqgevmdvdd lregklalde ggsdteslye iaglnkviqf vrhwrqwnrv
      421 frwkchdvvk srvfywlvil ivalntlsia sehhhqplwl thlqdvanrv llalftveml
      481 mkmyglglrq yfmsifnrfd cfvvcsglle illvesgamt plgisvlrci rllrifkitk
      541 ywtslsnlva sllnsirsia slllllflfi vifallgmql fggrydfedt evrrsnfdsf
      601 pqalisvfqv ltgedwnsvm yngimayggp sypgvlvciy fiilfvcgny illnvflaia
      661 vdnlaeaesl tsaqkakaee rrrrkmskgl pdkseeekat vakkleqkpk gegipttakl
      721 kidefesnvn evkdpypsad fpgddeedep evpisprprp laelqlkeka vpipeasaff
      781 ifsptnkirv lchrivnatw ftnfillfil lssaalaaed plraesvrnq ilgyfdigft
      841 svftveivlk mttygaflhk gsfcrnyfni ldlvvvavsl ismglessai svvkilrvlr
      901 vlrplrainr akglkhvvqc vfvairtign ivlvttllqf mfacigvqlf kgkffscndl
      961 skmteeecrg yyyvykdgdp tqievrprqw vhnafhfdnv lsammslftv stfegwpell
     1021 ykaidsheed kgpvynhrve maiffiiyii liaffmmnif vgfvivtfqe qgeteyknce
     1081 ldknqrqcvq yalkarplrc yipknpyqyk vwyivtssyf eylmfaliml nticlgmqhy
     1141 nqseqmnhis dilnvaftii ftlemilklm afkargyfgd pwnvfdfliv igsiidvils
     1201 eidtflassg glyclgggcg nvdpdesari ssaffrlfrv mrlikllsra egvrtllwtf
     1261 iksfqalpyv allivmlffi yavigmqmfg kialvdgtqi nrnnnfqtfp qavlllfrca
     1321 tgeawqeill acsygqlcdp esdyapgeeh tcgtdfayyy flsfymlcaf liinlfvavi
     1381 mdnfdyltrd wsilgphhld efkaiwaeyd peatgrikhl dvvtllrriq pplgfgkfcp
     1441 hrvackrlvg mnmplnsdgt vtfnatlfal vrtalkikte gnfeqaneel raiikkvwkr
     1501 tsmklldqvi ppigddevtv gkfyatfliq ehfrkfmrrq eeyygyrpkk dtvqiqaglr
     1561 tieeeaapei rrtisgdlta eeeleramve aameegifrr tgglfgqvds flertnslap
     1621 hmanqrplqf teiemeemes pvfledfpqr psthplaran tnnananvas gnsnhgnsqa
     1681 fpsvhyegel aeetetpatr ggpfgrpqga lgphsksrve rlqgqqpwrr mpgaqapaas
     1741 cqlmgeespv pearsptpgs lpgeappgsr medgtpggpa patallirea lvrggldsla
     1801 vdanfvmatg qalaeacqme prevevaaae llqgreapeg vpgaqgwsgl gsslgsidqr
     1861 egsqetlipr rp
//
LOCUS       XP_061015798            1336 aa            linear   MAM 02-DEC-2023
DEFINITION  immunoglobulin-like and fibronectin type III domain-containing
            protein 1 [Dama dama].
ACCESSION   XP_061015798
VERSION     XP_061015798.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159815.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1336
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1336
                     /product="immunoglobulin-like and fibronectin type III
                     domain-containing protein 1"
                     /calculated_mol_wt=145824
     Region          30..121
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          47..51
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          60..64
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          87..91
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          101..106
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          114..117
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          169..201
                     /region_name="THB"
                     /note="Tri-helix bundle domain; pfam18362"
                     /db_xref="CDD:465725"
     Region          242..306
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cd00096"
                     /db_xref="CDD:409353"
     Region          246..250
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          275..279
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          289..294
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          303..306
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          311..>383
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          459..542
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          475..479
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          487..491
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          512..516
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          526..531
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          535..538
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          560..642
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          568..572
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          581..585
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          608..612
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          <622..939
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          622..627
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          635..638
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          960..1039
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          968..972
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          981..985
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1004..1008
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1018..1023
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1032..1035
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1043..1132
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(1043,1110,1125)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(1126..1127,1129..1130)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          1162..1251
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          1179..1183
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1192..1196
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1217..1221
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1231..1236
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1244..1247
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..1336
                     /gene="IGFN1"
                     /coded_by="XM_061159815.1:1..4011"
                     /db_xref="GeneID:133068900"
ORIGIN      
        1 magkslkkss tpgvsiwqlv eevpkgcstp dfvqrpiala lqegknatfr avvcgeprpr
       61 vrwhcskgdl sssskyqvss gtgsrehvlq inkltgedtd vyrctavnay geatcsarlt
      121 vievgfrknr krpkepqedl rkelvdfrkm lkkrepppap kkevdmervw qllmtadrkd
      181 yeqiclkygi vdfrgmlrrl qrmskereek lapylntian lrhvrvnkeg iatfgleldl
      241 kspeskiyly kdgemvpygf dnqtkhslrr lgkhyqfqiq dlkpedagiy qvrvedahvf
      301 tteleasaip phvvvpladv rceergdaif ectlsspcss atwrfqhrpl hlsdkyetfv
      361 spdglrhrll vrgvrfsdmg lyslgtklha ssawlvveag kdksllttsa dhqrqaqeag
      421 rdggsdaygq rrdatlsprs rrkpgtggfs edargpaghf sqgladmeve rgepavlsct
      481 ltrdlgpgaw fkdgvklsaq dgltleqdgl ahrlviaqad gtragrysfa aggqqseatl
      541 tvhdppviap dvsaklrepl vvkagkpvtm kvpfqsclpv qatwrkdgee vaggsgrgaq
      601 vavgdgftrl clpsasrqdr gqysvtlrsq ggstqaeltl qvldkpqppq gplevqdghg
      661 aglslrwrpp kddggraleq yvverrqagr stwlkvgepr sdstsftdah teqgkkyayr
      721 vravtaegps ealeseevlv apearpgpps ppsilsassq gvtlswtapr gpgsahilgy
      781 liekrkkgsn awvavnqkpv pekkwtvgdl rqgwqyefrv tavapsgrge pgppseavfa
      841 rdpmrppgpv rdlqvtdtsh tsitlswarp dsqdgdepqg yvvelrgaas pqwgpchagt
      901 ipgttytakg lrpresyllr vtavndggpg qptalgsave ampvsvrprf cmdasmkdll
      961 tvragdtvrv pvyfeaaptp evtwlkdglp lpkrsvasvk dgltqllips aslddsgiyt
     1021 vvlrsprgee atysfrlrva arprapgpvv lregtlgsvt vewepspdet eagaaplhya
     1081 vlmrtsahap wcpaaerlhn crftlvgvlp gheyhfrvva knelgaseps dtrqpwvvpr
     1141 qppdkaaarg lsyrepdlsq kprflvglrp hllplgtecr mtcavqgqpr phvswfkndq
     1201 slanhpaayt tdvmgvcslv ipsvsatdgg qykavaentl gqavstatli vveprdeprr
     1261 tlewpcpapq lledrgslkl hssrhaglgs pskgvedagh aqslrgrrar gkllqggvea
     1321 sgktkrkraf rlpals
//
LOCUS       XP_061015799             272 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-1,3-mannosyl-glycoprotein
            4-beta-N-acetylglucosaminyltransferase-like protein MGAT4E [Dama
            dama].
ACCESSION   XP_061015799
VERSION     XP_061015799.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159816.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..272
                     /product="alpha-1,3-mannosyl-glycoprotein
                     4-beta-N-acetylglucosaminyltransferase-like protein
                     MGAT4E"
                     /calculated_mol_wt=30607
     Region          <1..122
                     /region_name="PGAP4-like"
                     /note="Post-GPI attachment to proteins factor 4 and
                     similar proteins; cl04660"
                     /db_xref="CDD:471077"
     CDS             1..272
                     /gene="LOC133068901"
                     /coded_by="XM_061159816.1:1..819"
                     /db_xref="GeneID:133068901"
ORIGIN      
        1 mnfaanlsey flmlddrvrc mpkfissiyr tlsawkelpw vtlefsslsf agkvfrssdl
       61 prlasfllvf pkdtpthlll sefplllaqn tpirfgssvf yhvgnhsgpe sacfpadkek
      121 vfgepdnpta svrtdmvvls tntpqyaytl nresfatlsp vrgnhltvil eepqkvvrie
      181 vltgsdkesk yqlqqghvel gygpledlgg carytllgpv vegrldqmvs yeedslealg
      241 cirllvleaq eswllirqir vwtteyeeee eg
//
LOCUS       XP_061015800             519 aa            linear   MAM 02-DEC-2023
DEFINITION  alpha-1,3-mannosyl-glycoprotein
            4-beta-N-acetylglucosaminyltransferase-like protein MGAT4E [Dama
            dama].
ACCESSION   XP_061015800
VERSION     XP_061015800.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159817.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 20% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..519
                     /product="alpha-1,3-mannosyl-glycoprotein
                     4-beta-N-acetylglucosaminyltransferase-like protein
                     MGAT4E"
                     /calculated_mol_wt=57427
     Region          <171..359
                     /region_name="PGAP4-like"
                     /note="Post-GPI attachment to proteins factor 4 and
                     similar proteins; cl04660"
                     /db_xref="CDD:471077"
     Region          288..312
                     /region_name="putative TM2 helix"
                     /note="putative TM2 helix [structural motif]"
                     /db_xref="CDD:409189"
     Region          325..350
                     /region_name="putative TM3 helix"
                     /note="putative TM3 helix [structural motif]"
                     /db_xref="CDD:409189"
     CDS             1..519
                     /gene="LOC133068902"
                     /coded_by="XM_061159817.1:1..1560"
                     /db_xref="GeneID:133068902"
ORIGIN      
        1 maggksvltg qeqgagrpgq egpvrasqts avlgsltrsg lqercaprtl tpwaaraamh
       61 cplgrccivs vglgvlwllf tldvprgved dqarmavkvq edhvlplpvp qedsyrrrkd
      121 lgpledwqnl tskyleklqq rkktwltvgv ssrprpgpep sgllstllsl fratskveqk
      181 rltvlvhlag adpawlgetv lsisslfspq ilagqlllih appdayppag agrepyseqn
      241 vdhaflmssa sklseyflll ednafcapnf ishvqwkvdt lrsqpwvfle fanlgvlgkl
      301 frngdlqtla hflllfyrek plnrllahfr vllaqkdpil ctpflfyhra tyyplndrqe
      361 asgalrkspy apdnppaaaf tdmkvfevhf pweaytldes ffwthsvsag nhltvilnqp
      421 adlrrvqvlt gtivdgkyal gkgqvelgyg pegmpqrcss fvllgrlleg qldqevvprs
      481 vgyqvscvrl lananqtggl ivrhiylwee hargadhlg
//
LOCUS       XP_061015801             992 aa            linear   MAM 02-DEC-2023
DEFINITION  collagen alpha-1(I) chain-like [Dama dama].
ACCESSION   XP_061015801
VERSION     XP_061015801.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159818.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..992
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..992
                     /product="collagen alpha-1(I) chain-like"
                     /calculated_mol_wt=103335
     Region          <14..643
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..992
                     /gene="LOC133068903"
                     /coded_by="XM_061159818.1:1..2979"
                     /db_xref="GeneID:133068903"
ORIGIN      
        1 mgawiclllt isvpaemspp pqaftgpqqr gspqstlapq dpggppttal gppavpsggq
       61 phpllapvgs flegsgadgm npscnltgmg gpyrshgqqp lrtqhytkhr trapvgllah
      121 rpaptrphsp rgiaspegse rcggsskvtq hneqnlrayg tptsprslqa tplagipgpr
      181 fptywpragw srksfwerkg rkttppipdp dghrrargae rkrappgprr gptpaatlrr
      241 gvpgvipdsp pkpsgcsrsa rtpgapspta qhpsvpgghr lrpqpgrpra raltrrrfgv
      301 aarargdsgg qdavlpaplg asrrpaaaap papsrrssnt cpapaarqsr grsrpsalga
      361 gpasqrdprl ttrparargg gevcggrgrp rapgdtrrap pptgapslsr agigcegqra
      421 gasprsgtgs raggsrfapg lrmkaflvgk rkgrrrraae tkageaggvr peprffprpr
      481 gdrtraegpc gedtgpptpp pegtsvgplg kagpgpptpa qrpegqrgrg tpepllrprh
      541 papgpphpls rvelgrcrrp rpstrlsgap ssllapglqt rnpesslgfh pgsdtpkssv
      601 lgeslaglpg aphlcsgrae eppkapalhp lsvpsslrpq pashighrta arqrwrwapt
      661 sqararsaen adsgftgckr gsvwhlhswl gargrkggra dprrdplvrs adpsqasrga
      721 sahaapacav ilpvrvaghp wlsppppqta gsggstppqr lrgsqapgvl alplyavtla
      781 snastasphk prlakstlta qegaptpppq rppscprpel kpllrawqgg gcqkgpgela
      841 gadagtgtcs praspravar vppfaslrqa glescpgdtp hpqlsgtwaa gqgphhlpgn
      901 psdghftpeg shsprghatr rhlagqlwrl sggggflqeq trardagpek sgvwqrprrg
      961 kelglskeal prefrkppcd rvksslrpvf ra
//
LOCUS       XP_061015802            1178 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat-containing G-protein coupled receptor 6 [Dama
            dama].
ACCESSION   XP_061015802
VERSION     XP_061015802.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159819.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 13% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1178
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1178
                     /product="leucine-rich repeat-containing G-protein coupled
                     receptor 6"
                     /calculated_mol_wt=124975
     Region          199..220
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <212..>465
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          221..244
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          245..268
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          269..292
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          293..316
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          317..340
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          341..364
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          365..387
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          385..600
                     /region_name="PPP1R42"
                     /note="protein phosphatase 1 regulatory subunit 42;
                     cl42388"
                     /db_xref="CDD:455733"
     Region          388..411
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          412..433
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          459..482
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          483..504
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          505..528
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          529..552
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          553..566
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          684..960
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          686..711
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          720..741
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          765..787
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          810..826
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          852..875
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          894..916
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          928..953
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..1178
                     /gene="LGR6"
                     /coded_by="XM_061159819.1:1..3537"
                     /db_xref="GeneID:133068904"
ORIGIN      
        1 mgghrapvag aetpttqafp raclqgrahr eaaglrllly trgrretrkq egpelprqpg
       61 lvptgdpasa arsvpqaldl awptrlvepq lldwplgpgg adpptlspaq srysrqvppp
      121 raakmplalr llplwlcaaa lcaqpdapss aapgpappgp rpacpspcrc reagillwad
      181 cserglstvp agldpltayl dlsmnnltel wpgifrhlrf leelrlsgnr lshipgqafs
      241 glsslkilml qnnrlggipa ealwelpglq slrldanlis lvpdrsfegl tslrhlwldd
      301 nalteipvsa lghlralqav tlalnrigrv pdyafrnlss lvvlhlhnnr iqrlgahsfe
      361 glqnletldl nynqlhefpv airtlgrlqe lgfhnnnika ipekaflgnp llqtihfydn
      421 piqfvgrsaf rhlpglhtls lngatdiqef pdlrgttsle iltltgaglq rlppgmcqql
      481 prlrvlelsh nrieglpslh gcqkleeigl qhnriwevra dtfhqltslr sldlswnair
      541 svhpaafatl rslvkldltd nqlsalplag lgglvhlklr gnhallqafp kdsfprlrtl
      601 evpyayqcca ysgcpgffpa sgpwgpqqsp pdardpprrt ladrydldpe elqlemgdpr
      661 pppavqcspa pgpfqpcenl feswgvrlav waivllallc nglvllglst agpgplppak
      721 fvvgalagan altglscgll asvdaltfgr fseygahwea gpgcraagfl avlgseasvl
      781 llslgaahcs vaaacvrarg kalaagsvra galgclalag llaalplasv geygasplcl
      841 pyappagrpa algfavalvl lhaacllvaa lacivlscgl paagleaawd cvavrhvawl
      901 tfadgllycp vaflslasal gllpvtpeav kailllvlpl paclnpllyl lfsphsredl
      961 rrlrlcprgt sawepsscds tqalvafpdm eltagaseth glpsgalvpr qqpgglqleg
     1021 ghvaepegsr fgnpeppvsp rdtcdvlgcr echtgpgswv pqmgqdlvsv lvrhphtlph
     1081 prcrmssgnw gsgdgrlvpg tppsvtsgqd rgpppgavgr dgsgkvlrfs wlgdcclial
     1141 ttptgplvei lggvakaagr asrgarlrgg agtfdisf
//
LOCUS       XP_061015803            1737 aa            linear   MAM 02-DEC-2023
DEFINITION  receptor-type tyrosine-protein phosphatase V-like [Dama dama].
ACCESSION   XP_061015803
VERSION     XP_061015803.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159820.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1737
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1737
                     /product="receptor-type tyrosine-protein phosphatase
                     V-like"
                     /calculated_mol_wt=184988
     Region          <59..393
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          59..140
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; smart00060"
                     /db_xref="CDD:214495"
     Site            order(59,124,139)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          495..570
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; smart00060"
                     /db_xref="CDD:214495"
     Site            order(678,738,762)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          680..751
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     Site            order(763..764,766..767)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          970..1088
                     /region_name="PTP_tm"
                     /note="TM proximal of protein tyrosine phosphatase,
                     receptor type J; pfam18861"
                     /db_xref="CDD:465889"
     Region          1196..1425
                     /region_name="PTP_DSP_cys"
                     /note="cys-based protein tyrosine phosphatase and
                     dual-specificity phosphatase superfamily; cl28904"
                     /db_xref="CDD:475123"
     Region          1528..1728
                     /region_name="PTP_DSP_cys"
                     /note="cys-based protein tyrosine phosphatase and
                     dual-specificity phosphatase superfamily; cl28904"
                     /db_xref="CDD:475123"
     CDS             1..1737
                     /gene="LOC133068905"
                     /coded_by="XM_061159820.1:1..5214"
                     /db_xref="GeneID:133068905"
ORIGIN      
        1 mrppalfaal lwlpgflakv veegrtgpsl praasvlalp apasfraqgt grpddpcspg
       61 pplrvtvssr grsasltlsw aapgpggpgr tlrlsrlnpr gsperqllqa htntssfefr
      121 dlvpgsryql evtavrpcgq naslgltvlt apstvqdlql hgsespsslr aswgsapggq
      181 dgyqlvlchl esqtvvhnvs tsagtltynf shllpgseyv levttwaahl qaktsarqwt
      241 apvppgqlal ralgtralra swgsaggaaw lhllltdlls gsnltagvtr gvsshtfpcl
      301 spgtpytlil savagprwaa gpsatewtrp staldlrltp qtpglgaswk agpgawegyl
      361 lrlsgpvekt lslgpgalnv tfpgplpsgh yalelrvlag pyearaqata wlgdaaaqhp
      421 qgsgtelpld gpeaskepgs rtlphsegap cllrnvsgpp gatqvtlhgp garsqvdavs
      481 algtataspt ghagpptpqp levasrdsps altvgwapap gprggyrvsw hqeggqgspg
      541 glvnlgpdna sltlrglvpg scyavsvwtr vgnlsasiqr aractlpapp anlslglaar
      601 tpvlravwsp paggrdgfll rlyclqppal esqetlgpea qtfswarlap gteflvwlat
      661 lrgpdqssst natgwtrpla palvnvtseg atqlraswvh apggrdgyrv tlyqagvpvh
      721 sspvgaqvdg asfsaltpgt eyevevvtqa gplravaara agwtppvvpa ellvsmqags
      781 avvslawasg plgrgachaq lagagllsre qplalgqarl vlrdltpgrn lsltvrcrag
      841 prqasthpvl lpvepdpved vqcqpeatrl alvwtvpagd vdtclvvaeq laaagaaqlv
      901 frantsggal llarlapaas yrlslsvlgr nglwsrvvsl vcattpeawh ppelaaaprl
      961 epepgmgvli aqgmfgeedg qiqwygviat tnmslarppr eavnctwydh yyggrdayla
     1021 vllsnpfypg pwaaptswpv pvgtddcgrt rdicngrlrp gsryrfsvva fsrhspdtli
     1081 avsafseprp spswavplpv aagivagvla lgvllgllcw rrvngqraek slrsqeltay
     1141 nlwthrpipv hsfqqsfeak sahayqaffq efeelkevgk eqprleaehp ansaknryph
     1201 vlpydhsrvr lalldgkphs dyinasfipg ythpqefiat qgplkktlad fwrlvweqqv
     1261 rvivmltvgm engrvlcehy wpadsrpith gpvtirllae qpqdewttre fqlhhaaqqq
     1321 lrrvkqlqft twpdhsvpea pssllafvel vreqaratvd agpllvhcsa gvgrsgtfva
     1381 lwrllrqlee eqavdvfhav hvlrlhrplm iqtpsqyifl hscllsrvle gphstcaaqa
     1441 aethsghwaa pgtthaagap rrpqpipvrn faqvcaeraa ngnagfleeh qlllqalkde
     1501 agsgtppprg eqnegrchew spsvesgpag emleawlfpg gpsgrdhvvl tgpagpaefw
     1561 elvwehgacv maslcppdpq eeefwptetq pvttdavtvr wvadgsaagw pctflhvthk
     1621 asgkerpvqr lqfpcwepgq vlptktllpf laavgrccsr dteqpctlls hcskgaaqlg
     1681 tflaleqllq qagtegtvdv ftvalqqsqa cglmtptleq yvhlysclds alleglp
//
LOCUS       XP_061015804             359 aa            linear   MAM 02-DEC-2023
DEFINITION  troponin I, slow skeletal muscle [Dama dama].
ACCESSION   XP_061015804
VERSION     XP_061015804.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159821.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 49% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..359
                     /product="troponin I, slow skeletal muscle"
                     /calculated_mol_wt=39898
     Region          187..318
                     /region_name="Troponin"
                     /note="pfam00992"
                     /db_xref="CDD:460018"
     CDS             1..359
                     /gene="TNNI1"
                     /coded_by="XM_061159821.1:1..1080"
                     /db_xref="GeneID:133068909"
ORIGIN      
        1 msgqrdsspg phsrleplwl hvplswhtsv lelagcrelp wpsavsckpd spletkegec
       61 pppgprhwgf rlgagrgldv eeggsrlrgw aigglpemal qgqpagrlgw epcphrssln
      121 llpsvhplhr irsvqagpec gqpswnmpll wlkdsfldlt agrltapgpa saggagmrkp
      181 kitasrklll kslmlakake cweqeheere aekkrylaer ipalqtrgls lsalqdlcrd
      241 lhakvevvde erydieakcl hntreikdlk lkvldlrgkf krpplrrvrv sadamlrall
      301 gskhkvsmdl ranlksvkke dtekerpvev gdwrknveam sgmegrkkmf daakspttq
//
LOCUS       XP_061015805            1057 aa            linear   MAM 02-DEC-2023
DEFINITION  LOW QUALITY PROTEIN: patched domain-containing protein 3-like [Dama
            dama].
ACCESSION   XP_061015805
VERSION     XP_061015805.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159822.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 20% of CDS bases
            frameshifts          :: corrected 1 indel
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1057
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1057
                     /product="LOW QUALITY PROTEIN: patched domain-containing
                     protein 3-like"
                     /calculated_mol_wt=116358
     Region          279..1057
                     /region_name="Patched"
                     /note="Patched family; pfam02460"
                     /db_xref="CDD:308203"
     CDS             1..1057
                     /gene="LOC133068910"
                     /coded_by="XM_061159822.1:1..3174"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon;
                     substituted 1 base at 1 genomic stop codon"
                     /db_xref="GeneID:133068910"
ORIGIN      
        1 mrsvagrkav vagatgkgal gggplstphp qpsdptsrkr ggevgrkrdt gddatgrgar
       61 vggaprpame gssspttrea sgpncppgar rlpdvlpsll piprrtvedr lrswagrgea
      121 tvppsepttl mslsqvapep epereaeqep gseaqgpgpe resgppegpg pepelpsaag
      181 qdwepergra agpsaepppg peappplpas qsenlraprp rchtncleap lsrafrrlgr
      241 kvgahhwifl llpmaltavl gtglmylprd geedleeeyt pigspakaer rfvqghftan
      301 dslvfsisrk saevpyasil vvsntetlle pdileeiskv ddtvqaltvt qdngtqipyr
      361 evcaknqgsc vppnpllfaw krnkglnlrt itfpiyslag qivslanilg gtvlgesmgp
      421 sqlllqakam rlqyyletgg eenerskawm ihfltkassl eeslalkkiq vvyfsslsrq
      481 lefeatsmtv iplfhlayll iilfaivscy rcdcvrnkmw vavfgvisva lavvsgfglm
      541 fyxfvlivan spflilgvgv ddmfimisaw qktslmdnis ermsdvyskv avsitittvt
      601 nvlafytgim tsfrsvqyfc iytgttllfc yfynitcfga fmaldgkrev vclrwlxkpe
      661 tpdqkcsslk nscclpcnsl qdeykadihp mnlffrdcfg pflistkski fvvllyvsyi
      721 iasvygcfhv qegldlrtla sddsyitpyf nveedhfsty gpsimvivte aldywdknar
      781 qklekclanf enseyvdknl tefwlreyik ymenlrqdin dktaflsnip tflmefplfa
      841 ydinvtssqe iicsrafiqt igissstnkk lmllqfqdma ekcdvplmvy npafiyfdqy
      901 saiaentvrn vvvgsaamfi vsllliphpl cslwvtfaia svivgvtgfm afwnvnldsi
      961 fminlvicig fsfdfsahis yafvssseps vdrkaiealy llgypvlqsa vstiigvsvl
     1021 saakayifrt ffkimflvmv fgaahglifi pvfltff
//
LOCUS       XP_061015806             376 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 183A isoform X1 [Dama dama].
ACCESSION   XP_061015806
VERSION     XP_061015806.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159823.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..376
                     /product="transmembrane protein 183A isoform X1"
                     /calculated_mol_wt=42778
     CDS             1..376
                     /gene="TMEM183A"
                     /coded_by="XM_061159823.1:121..1251"
                     /db_xref="GeneID:133068911"
ORIGIN      
        1 margpgpltr prpdtvvmpk rgkrlkfraq dacsgrvtva dyansdpavv rsgrvkkava
       61 navqqevksl cgleasqvpa vealsgagep cdiidssget daqeesirer tisrkkkskr
      121 hredldgtgg eeypmdiwll lasyirpedi vnfslickna wtvtctaafw trlyrrhytl
      181 daslplrlrp esmeklhclr acvirslyhm yepfaarisk npaipestps tlknskcllf
      241 wcrkivgnrq epmwefnfkf kkqsprlksk cmgglqppiq yedvhtnpdq dccllqvttl
      301 nfifipivmg miftlftisv stdmrhhrvr lvfqdypvhg gqklrseqgv qvildpvhsi
      361 rlfdwwhpqy pfslra
//
LOCUS       XP_061015807             375 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 183A isoform X2 [Dama dama].
ACCESSION   XP_061015807
VERSION     XP_061015807.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159824.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..375
                     /product="transmembrane protein 183A isoform X2"
                     /calculated_mol_wt=42649
     CDS             1..375
                     /gene="TMEM183A"
                     /coded_by="XM_061159824.1:122..1249"
                     /db_xref="GeneID:133068911"
ORIGIN      
        1 margpgpltr prpdtvvmpk rgkrlkfraq dacsgrvtva dyansdpavv rsgrvkkava
       61 navqqevksl cgleasqvpa vealsgagep cdiidssget daqeesirer tisrkkkskr
      121 hrdldgtgge eypmdiwlll asyirpediv nfslicknaw tvtctaafwt rlyrrhytld
      181 aslplrlrpe smeklhclra cvirslyhmy epfaariskn paipestpst lknskcllfw
      241 crkivgnrqe pmwefnfkfk kqsprlkskc mgglqppiqy edvhtnpdqd ccllqvttln
      301 fifipivmgm iftlftisvs tdmrhhrvrl vfqdypvhgg qklrseqgvq vildpvhsir
      361 lfdwwhpqyp fslra
//
LOCUS       XP_061015808             368 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 183A isoform X3 [Dama dama].
ACCESSION   XP_061015808
VERSION     XP_061015808.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159825.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..368
                     /product="transmembrane protein 183A isoform X3"
                     /calculated_mol_wt=41948
     CDS             1..368
                     /gene="TMEM183A"
                     /coded_by="XM_061159825.1:122..1228"
                     /db_xref="GeneID:133068911"
ORIGIN      
        1 margpgpltr prpdtvvmpk rgkrlkfraq dacsgrvtva dyansdpavv rsgrvkkava
       61 navqqeasqv pavealsgag epcdiidssg etdaqeesir ertisrkkks krhredldgt
      121 ggeeypmdiw lllasyirpe divnfslick nawtvtctaa fwtrlyrrhy tldaslplrl
      181 rpesmeklhc lracvirsly hmyepfaari sknpaipest pstlknskcl lfwcrkivgn
      241 rqepmwefnf kfkkqsprlk skcmgglqpp iqyedvhtnp dqdccllqvt tlnfifipiv
      301 mgmiftlfti svstdmrhhr vrlvfqdypv hggqklrseq gvqvildpvh sirlfdwwhp
      361 qypfslra
//
LOCUS       XP_061015809             343 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 183A isoform X4 [Dama dama].
ACCESSION   XP_061015809
VERSION     XP_061015809.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159826.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..343
                     /product="transmembrane protein 183A isoform X4"
                     /calculated_mol_wt=38619
     CDS             1..343
                     /gene="TMEM183A"
                     /coded_by="XM_061159826.1:122..1153"
                     /db_xref="GeneID:133068911"
ORIGIN      
        1 margpgpltr prpdtvvmpk rgkrlkfraq dacsgrvtva dyansdpavv rsgrvkkava
       61 navqqevksl cgleasqvpa vealsgagep cdiidssget daqeesirer tisrkkkskr
      121 hredldgtgg eeypmdiwll lasyirpedi vnfslickna wtvtctaafw trlyrrhytl
      181 daslplrlrp esmeklhclr acvirslyhm yepfaarisk npaipestps tlknskcllf
      241 wcrkivgnrq epmwefnfkf kkqikeqvyg riaashsvrr csyqpgpgll ptaghhpqfh
      301 lysnchgndi ypvyyqrehg haasssetgv prlscpwwse taq
//
LOCUS       XP_061015810             342 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 183A isoform X5 [Dama dama].
ACCESSION   XP_061015810
VERSION     XP_061015810.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159827.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..342
                     /product="transmembrane protein 183A isoform X5"
                     /calculated_mol_wt=38490
     CDS             1..342
                     /gene="TMEM183A"
                     /coded_by="XM_061159827.1:124..1152"
                     /db_xref="GeneID:133068911"
ORIGIN      
        1 margpgpltr prpdtvvmpk rgkrlkfraq dacsgrvtva dyansdpavv rsgrvkkava
       61 navqqevksl cgleasqvpa vealsgagep cdiidssget daqeesirer tisrkkkskr
      121 hrdldgtgge eypmdiwlll asyirpediv nfslicknaw tvtctaafwt rlyrrhytld
      181 aslplrlrpe smeklhclra cvirslyhmy epfaariskn paipestpst lknskcllfw
      241 crkivgnrqe pmwefnfkfk kqikeqvygr iaashsvrrc syqpgpgllp taghhpqfhl
      301 ysnchgndiy pvyyqrehgh aasssetgvp rlscpwwset aq
//
LOCUS       XP_061015811            1218 aa            linear   MAM 02-DEC-2023
DEFINITION  liprin-alpha-4 [Dama dama].
ACCESSION   XP_061015811
VERSION     XP_061015811.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159828.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1218
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1218
                     /product="liprin-alpha-4"
                     /calculated_mol_wt=137406
     Region          <36..372
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <227..>513
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          861..931
                     /region_name="SAM_liprin-alpha1,2,3,4_repeat1"
                     /note="SAM domain of liprin-alpha1,2,3,4 proteins repeat
                     1; cd09562"
                     /db_xref="CDD:188961"
     Region          978..1043
                     /region_name="SAM_liprin-alpha1,2,3,4_repeat2"
                     /note="SAM domain of liprin-alpha1,2,3,4 proteins repeat
                     2; cd09565"
                     /db_xref="CDD:188964"
     Region          1063..1134
                     /region_name="SAM_liprin-alpha1,2,3,4_repeat3"
                     /note="SAM domain of liprin-alpha1,2,3,4 proteins repeat
                     3; cd09568"
                     /db_xref="CDD:188967"
     CDS             1..1218
                     /gene="PPFIA4"
                     /coded_by="XM_061159828.1:314..3970"
                     /db_xref="GeneID:133068912"
ORIGIN      
        1 mcevmptine gdplgpphea gadasfeqlm vdmlderekl leslresqea llatqsrlqd
       61 alherdqlqr hlnsahpqef ttltrelsmc reqllereee iselkaernn trlllehlec
      121 lvsrherslr mtvvkrqaqs psgvssevev lkalkslfeh hkaldekvre rlraalervt
      181 tleeqlacah qqvsslqqga gvrdgvaeee gtvelgpkal wkedvgqvee lqellekqnf
      241 elsqarerlv tltatvaele edlgtarrdl lkseelsskh qrdlrevsrg lgltlsfwal
      301 aqkedmeeri ttlekrylaa qreaasihdl ndklenelat keslhrqcee karylqelle
      361 vaeqklqqtm rkaetlpeve aelaqrvaal tkaeerhgni eehlqqlegq leeknqelar
      421 vrqrermnea hnkrlsdtvd rllseakerl qlhlrermaa leekntliqe letsqrqiee
      481 qhhhkgrlse eieklrqevd qlkgrggpfv dgihsraytg satdvrfsls taahasqglh
      541 rcysarreqs akdwepsppp evlvptatpa fdsdreisdv dedepgglvg stdvvspssh
      601 sdaqtlamml qeqldainee irmiqqekes telraeelet rvtsgsmeal dltqlhkrgs
      661 iptsltalsl asaspplsgr atpkltsrsa aqdldrmgvm tlpsdlrkhr rkllspvswe
      721 enredkatik cetsppsspr tlqleklghp arsqeegksa ledpgsnpss snssqdslhk
      781 gakrkgikss igrlfgkkek grliqpsrdg ptghvvlltd selglqepmv paklgtqaek
      841 drrlkkkhql ledarrkgms faqwdgptvv swlelwvgmp awyvaacran vksgaimsal
      901 sdteiqreig isnalhrlkl rlaiqemvsl tspsapptsr tssgnvwvth eemetlatst
      961 ktdseegswa qtlvygdmnh ewignqwlps lglpqyrsyf meclvdarml dhltkkdlrv
     1021 hlkmvdsshr tslqygimcl krlnydrkel ekrreesqhe ikdvlvwtnd qvvhwvqsig
     1081 lrdyagnlhe sgvhgallal denfdhntla lvlqiptqnt qarqvleref nnllalgtdr
     1141 klddgeekgl rrapswrkrf rprdphgrap lsaaadtlpa afrtsavgpv ppppppkkit
     1201 pearshylyg hmlsafrd
//
LOCUS       XP_061015812             485 aa            linear   MAM 02-DEC-2023
DEFINITION  myosin-binding protein H [Dama dama].
ACCESSION   XP_061015812
VERSION     XP_061015812.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159829.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..485
                     /product="myosin-binding protein H"
                     /calculated_mol_wt=52194
     Region          79..165
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(79,145,160)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(161..162,164..165)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          191..271
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          200..204
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          213..217
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          237..241
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          251..256
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          264..267
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          275..363
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(275,340,355)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(356..357,359..360)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          390..479
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          407..411
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          420..424
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          445..449
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          459..464
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          472..475
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..485
                     /gene="MYBPH"
                     /coded_by="XM_061159829.1:915..2372"
                     /db_xref="GeneID:133068914"
ORIGIN      
        1 mteqatseap acgleetase sarvpptgps gdtaapqapg gerasepqep apqppdpaas
       61 aapaaptasd palpredvps aplllavedv sessvtvswe pperlgrlgl qgyvlelrre
      121 galdwvpvna rpmmvtqqtv rnlavgdkff vrvaavssag agppavleql vhiqetieap
      181 kirvprhlrq tyirqvgesi nlqipfqgnp rpqalwthng haldsqrvsv rtgdqdsilf
      241 irsaqrsdsg cyeltvqlkg leakaainil viekpgppss irlldvwscn aalewtppqd
      301 tgntellgyt vqkadkktgr wftvleryhp ttctvsdliv gnsysfrvfs enlcglsasa
      361 avtkelahiv ktdvvakpks fverdfseap sftqpladht stpgystqls csvraspkpk
      421 iiwmknkmdi qgdpkyrals eqgvctleir kpspfdsgvy tckainvlge asvdcrlevk
      481 asath
//
LOCUS       XP_061015813             326 aa            linear   MAM 02-DEC-2023
DEFINITION  adenosine receptor A1 isoform X1 [Dama dama].
ACCESSION   XP_061015813
VERSION     XP_061015813.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159830.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..326
                     /product="adenosine receptor A1 isoform X1"
                     /calculated_mol_wt=36488
     Region          10..299
                     /region_name="7tmA_Adenosine_R_A1"
                     /note="adenosine receptor subtype A1, member of the class
                     A family of seven-transmembrane G protein-coupled
                     receptors; cd15071"
                     /db_xref="CDD:341323"
     Region          10..37
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:341323"
     Site            order(12,16,66,70,87..88,91,171..172,177,180,247,250..251,
                     254,270..271,274)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:341323"
     Region          44..71
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:341323"
     Region          80..110
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:341323"
     Region          124..142
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:341323"
     Region          177..207
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:341323"
     Region          227..257
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:341323"
     Region          267..292
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:341323"
     CDS             1..326
                     /gene="ADORA1"
                     /coded_by="XM_061159830.1:382..1362"
                     /db_xref="GeneID:133068915"
ORIGIN      
        1 mppsisafqa ayigievlia lvsvpgnvlv iwavkvnqal rdatfcfivs lavadvavga
       61 lviplailin igprtyfhtc lkvacpvlil tqssilalla iavdrylrvk iplryktvvt
      121 prravvaitg cwvlsfvvgl tpmfgwnnls vverdwlang svgepviecq fekvismeym
      181 vyfnffvwvl pplllmvliy mevfylirkq lnkkvsassg dpqkyygkel kiakslalil
      241 flfalswlpl hilncvtlfc pschmprili yiaiflshgn samnpivyaf riqkfrvtfl
      301 kiwndhfrcq pappvdedpp aerpdd
//
LOCUS       XP_061015814             326 aa            linear   MAM 02-DEC-2023
DEFINITION  adenosine receptor A1 isoform X1 [Dama dama].
ACCESSION   XP_061015814
VERSION     XP_061015814.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159831.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..326
                     /product="adenosine receptor A1 isoform X1"
                     /calculated_mol_wt=36488
     Region          10..299
                     /region_name="7tmA_Adenosine_R_A1"
                     /note="adenosine receptor subtype A1, member of the class
                     A family of seven-transmembrane G protein-coupled
                     receptors; cd15071"
                     /db_xref="CDD:341323"
     Region          10..37
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:341323"
     Site            order(12,16,66,70,87..88,91,171..172,177,180,247,250..251,
                     254,270..271,274)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:341323"
     Region          44..71
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:341323"
     Region          80..110
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:341323"
     Region          124..142
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:341323"
     Region          177..207
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:341323"
     Region          227..257
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:341323"
     Region          267..292
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:341323"
     CDS             1..326
                     /gene="ADORA1"
                     /coded_by="XM_061159831.1:212..1192"
                     /db_xref="GeneID:133068915"
ORIGIN      
        1 mppsisafqa ayigievlia lvsvpgnvlv iwavkvnqal rdatfcfivs lavadvavga
       61 lviplailin igprtyfhtc lkvacpvlil tqssilalla iavdrylrvk iplryktvvt
      121 prravvaitg cwvlsfvvgl tpmfgwnnls vverdwlang svgepviecq fekvismeym
      181 vyfnffvwvl pplllmvliy mevfylirkq lnkkvsassg dpqkyygkel kiakslalil
      241 flfalswlpl hilncvtlfc pschmprili yiaiflshgn samnpivyaf riqkfrvtfl
      301 kiwndhfrcq pappvdedpp aerpdd
//
LOCUS       XP_061015815             216 aa            linear   MAM 02-DEC-2023
DEFINITION  adenosine receptor A1 isoform X2 [Dama dama].
ACCESSION   XP_061015815
VERSION     XP_061015815.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159832.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..216
                     /product="adenosine receptor A1 isoform X2"
                     /calculated_mol_wt=24814
     Region          <4..189
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          16..32
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:341228"
     Region          68..91
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:341228"
     Region          123..145
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:341228"
     Region          157..182
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:341228"
     CDS             1..216
                     /gene="ADORA1"
                     /coded_by="XM_061159832.1:190..840"
                     /db_xref="GeneID:133068915"
ORIGIN      
        1 mlsryktvvt prravvaitg cwvlsfvvgl tpmfgwnnls vverdwlang svgepviecq
       61 fekvismeym vyfnffvwvl pplllmvliy mevfylirkq lnkkvsassg dpqkyygkel
      121 kiakslalil flfalswlpl hilncvtlfc pschmprili yiaiflshgn samnpivyaf
      181 riqkfrvtfl kiwndhfrcq pappvdedpp aerpdd
//
LOCUS       XP_061015816             383 aa            linear   MAM 02-DEC-2023
DEFINITION  chitinase-3-like protein 1 [Dama dama].
ACCESSION   XP_061015816
VERSION     XP_061015816.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159833.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..383
                     /product="chitinase-3-like protein 1"
                     /calculated_mol_wt=42860
     Region          24..380
                     /region_name="GH18_chitolectin_chitotriosidase"
                     /note="This conserved domain family includes a large
                     number of catalytically inactive chitinase-like lectins
                     (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1,
                     oviductin, and AMCase (acidic mammalian chitinase), as
                     well as catalytically active...; cd02872"
                     /db_xref="CDD:119351"
     Site            order(27,31,99..100,138,140..141,180..181,204,206..207,
                     212,261,263,290,352)
                     /site_type="active"
                     /db_xref="CDD:119351"
     CDS             1..383
                     /gene="CHI3L1"
                     /coded_by="XM_061159833.1:89..1240"
                     /db_xref="GeneID:133068917"
ORIGIN      
        1 mglraartgf vvlvllqsca ayklicyyts wsqyregdgs cfpdaidpfl cthviysfan
       61 isnneidtwe wndvtlydtl ntlknrnpnl ktllsvggwn fgpqrfskia sktqsrrtfi
      121 ksvppflrth gfdgldlawl ypgwrdkrhl talikemkae fvreaqagte qlllsaavpa
      181 gkiaidrgyd iaqisrhldf islltydfhg awrqtvghhs plfrgqedar sdrfsntdya
      241 vsymlrlgap anklvmgipt fgrsftlass ktdvgaptsg pgipgqftke kgilayyeic
      301 dflhgatvhr lrdqqvpyat kgnqwvaydd qesvknkary lrnrqlagam vwaldlddfr
      361 gtfcgqnlpf pltsavkdvl agv
//
LOCUS       XP_061015817             150 aa            linear   MAM 02-DEC-2023
DEFINITION  protein BTG2 [Dama dama].
ACCESSION   XP_061015817
VERSION     XP_061015817.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159834.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..150
                     /product="protein BTG2"
                     /calculated_mol_wt=16602
     Region          1..115
                     /region_name="BTG"
                     /note="BTG family; pfam07742"
                     /db_xref="CDD:462251"
     CDS             1..150
                     /gene="BTG2"
                     /coded_by="XM_061159834.1:135..587"
                     /db_xref="GeneID:133068918"
ORIGIN      
        1 mlpeiaaavg flssllrtrg cvneqrlqvf rgalqaalte hykhhwfpek pskgsgyrci
       61 rinhkmdpii skvasqigls qpqlhqllps eltlwvdpye vsyrigedgs icvlyqeapv
      121 atsyglltck nqmilgrssp sknyimavss
//
LOCUS       XP_061015818             376 aa            linear   MAM 02-DEC-2023
DEFINITION  fibromodulin [Dama dama].
ACCESSION   XP_061015818
VERSION     XP_061015818.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159835.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..376
                     /product="fibromodulin"
                     /calculated_mol_wt=42860
     Region          75..109
                     /region_name="LRRNT"
                     /note="Leucine rich repeat N-terminal domain; smart00013"
                     /db_xref="CDD:214470"
     Region          105..167
                     /region_name="LRR_8"
                     /note="Leucine rich repeat; pfam13855"
                     /db_xref="CDD:404697"
     Region          107..130
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          131..156
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <151..>356
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          157..177
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          178..201
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          202..224
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          225..245
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          246..269
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          270..314
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          315..334
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..376
                     /gene="FMOD"
                     /coded_by="XM_061159835.1:403..1533"
                     /db_xref="GeneID:133068919"
ORIGIN      
        1 mqwasillla glcslsraqy dedshwwfqf lrnqqstydd pydpypyepy epypyggeeg
       61 payaygsppp peprdcpqec dcppnfptam ycdnrnlkyl pfvpsrmkyv yfqnnqissi
      121 qegvfdnatg llwialhgnq itsdkvgkkv fsklrhlerl yldhnnltri psplprslre
      181 lhldhnqisr vpnnalegle nltalylhhn eiqevgssmr glrslilldl synhlrkvpd
      241 glpsaleqly lehnnvfsvp dsyfrgspkl lyvrlshnsl tnnglasntf nssslleldl
      301 synqlqkipp vstnlenlyl qgnrinefsi ssfctvvdvm nfsklqvlrl dgneikrsam
      361 padaplclrl asliei
//
LOCUS       XP_061015819             380 aa            linear   MAM 02-DEC-2023
DEFINITION  prolargin [Dama dama].
ACCESSION   XP_061015819
VERSION     XP_061015819.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159836.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..380
                     /product="prolargin"
                     /calculated_mol_wt=43471
     Region          70..105
                     /region_name="LRRNT"
                     /note="Leucine rich repeat N-terminal domain; smart00013"
                     /db_xref="CDD:214470"
     Region          102..125
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <104..>303
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          126..149
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          150..170
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          171..194
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          195..220
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          221..241
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          242..265
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          266..290
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          289..360
                     /region_name="LRR_8"
                     /note="Leucine rich repeat; pfam13855"
                     /db_xref="CDD:404697"
     CDS             1..380
                     /gene="PRELP"
                     /coded_by="XM_061159836.1:183..1325"
                     /db_xref="GeneID:133068920"
ORIGIN      
        1 mrsslcwlit llilasaaqg qptrrprprp rprprprlrp tpsfpqpdep teptdlpppl
       61 ppgppsvfpd cprecycppd fpsalycdsr nlrkvpvips rihylylqnn fitelpvesf
      121 knatglrwin ldnnrirkld qrvleklpsl vflymeknql eevpaalprn leqlrlsqnq
      181 isrippgvfs klenlllldl qhnklsdgvf kpdtfqglkn lmqlnlahnt lrkmppkvpa
      241 aihqlyldsn rieaipsgyf kgfpnlafir lnynqlsdrg lpknsfnisn llvlhlshnr
      301 issvptissr lehlylnnns iekingtqic pnnlvafhdf ssdlehvphl rylrldgnyl
      361 kppipldlmm cfrllqsvvi
//
LOCUS       XP_061015820            1207 aa            linear   MAM 02-DEC-2023
DEFINITION  plasma membrane calcium-transporting ATPase 4 isoform X1 [Dama
            dama].
ACCESSION   XP_061015820
VERSION     XP_061015820.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159837.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1207
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1207
                     /product="plasma membrane calcium-transporting ATPase 4
                     isoform X1"
                     /calculated_mol_wt=133672
     Region          20..1052
                     /region_name="ATPase-IIB_Ca"
                     /note="plasma-membrane calcium-translocating P-type
                     ATPase; TIGR01517"
                     /db_xref="CDD:273668"
     Region          1089..1135
                     /region_name="ATP_Ca_trans_C"
                     /note="Plasma membrane calcium transporter ATPase C
                     terminal; pfam12424"
                     /db_xref="CDD:463575"
     CDS             1..1207
                     /gene="ATP2B4"
                     /coded_by="XM_061159837.1:888..4511"
                     /db_xref="GeneID:133068921"
ORIGIN      
        1 mtnptehtlp ansilesreg efgctvmdlr klmelrssda idqinvhygg vmnlcsrlkt
       61 npveglsgnp adlekrkqvf gqnfippkkp ktflelvwea lqdvtliile iaaiislvls
      121 fyrppggene qcglavsspe degeaeagwi egaailfsvi ivvlvtafnd wskekqfrgl
      181 qnriekeqkf svirnghiiq lpvaeivvgd iaqikygdll padgiliqgn dlkidesslt
      241 gesdhvkksv erdpmllsgt hvmegsgrmv vtavginsqt giiftllgas egeeeekkkk
      301 gkkqgvpenr nkaktqdgva leiqplnsqe gidseekekk aaklpkkeks vlqgkltrla
      361 vqigkaglim saitvlilil yfvidnfviq rrpwlaectp iyvqyfvkff iigvtvlvva
      421 vpeglplavt islaysvkkm mkdnnlvrhl dacetmgnat aicsdktgtl tmnrmtvvqa
      481 yvgdtryhqi pnpedlvpkv ldlivngisi nsaytskilp pekegglprq vgnktecall
      541 gfvadlkqdy havrsevpee klykvytfns vrksmstvve rpgggfrmys kgaseiilrk
      601 cnrildkkge avpfknkdrd emvrtviepm aceglrtlci ayrdfsdgep pwdneseilt
      661 eltciavvgi edpvrpevpe aiakckragi tvrmvtgdni ntaraiatkc givtpgddfl
      721 clegkefnrl irnekgeveq ekldkiwpkl rvlarssptd khtlvkgiid stvgdqrqvv
      781 avtgdgtndg palkkadvgf amgiagtdva keasdiiltd dnftsivkav mwgrnvydsi
      841 skflqfqltv nvvavivaft gacitqdspl kavqmlwvnl imdtfaslal atepptdsll
      901 krrpygrnkp lisrtmmkni lghavyqlsv ifflvfagek ffdidsgrra plhsppsqhy
      961 tivfntfvlm qlfneinsrk ihgernvfsg ifrnlifcsv vlgtfvsqii ivefggkpfs
     1021 ctkltlsqwf wclfigigel lwgqvistip tqslkflkea ghgttkeeit kdaegldeid
     1081 haemelrrgq ilwfrglnri qtqikvvkaf hsslhesiqk prnqnsihnf mthpeftide
     1141 egprtpllde qeeeifekvs kpgtkmpspd gevtpqtnrn nnsvdccqvq ivashsdspl
     1201 hsletsv
//
LOCUS       XP_061015821            1207 aa            linear   MAM 02-DEC-2023
DEFINITION  plasma membrane calcium-transporting ATPase 4 isoform X1 [Dama
            dama].
ACCESSION   XP_061015821
VERSION     XP_061015821.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159838.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1207
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1207
                     /product="plasma membrane calcium-transporting ATPase 4
                     isoform X1"
                     /calculated_mol_wt=133672
     Region          20..1052
                     /region_name="ATPase-IIB_Ca"
                     /note="plasma-membrane calcium-translocating P-type
                     ATPase; TIGR01517"
                     /db_xref="CDD:273668"
     Region          1089..1135
                     /region_name="ATP_Ca_trans_C"
                     /note="Plasma membrane calcium transporter ATPase C
                     terminal; pfam12424"
                     /db_xref="CDD:463575"
     CDS             1..1207
                     /gene="ATP2B4"
                     /coded_by="XM_061159838.1:753..4376"
                     /db_xref="GeneID:133068921"
ORIGIN      
        1 mtnptehtlp ansilesreg efgctvmdlr klmelrssda idqinvhygg vmnlcsrlkt
       61 npveglsgnp adlekrkqvf gqnfippkkp ktflelvwea lqdvtliile iaaiislvls
      121 fyrppggene qcglavsspe degeaeagwi egaailfsvi ivvlvtafnd wskekqfrgl
      181 qnriekeqkf svirnghiiq lpvaeivvgd iaqikygdll padgiliqgn dlkidesslt
      241 gesdhvkksv erdpmllsgt hvmegsgrmv vtavginsqt giiftllgas egeeeekkkk
      301 gkkqgvpenr nkaktqdgva leiqplnsqe gidseekekk aaklpkkeks vlqgkltrla
      361 vqigkaglim saitvlilil yfvidnfviq rrpwlaectp iyvqyfvkff iigvtvlvva
      421 vpeglplavt islaysvkkm mkdnnlvrhl dacetmgnat aicsdktgtl tmnrmtvvqa
      481 yvgdtryhqi pnpedlvpkv ldlivngisi nsaytskilp pekegglprq vgnktecall
      541 gfvadlkqdy havrsevpee klykvytfns vrksmstvve rpgggfrmys kgaseiilrk
      601 cnrildkkge avpfknkdrd emvrtviepm aceglrtlci ayrdfsdgep pwdneseilt
      661 eltciavvgi edpvrpevpe aiakckragi tvrmvtgdni ntaraiatkc givtpgddfl
      721 clegkefnrl irnekgeveq ekldkiwpkl rvlarssptd khtlvkgiid stvgdqrqvv
      781 avtgdgtndg palkkadvgf amgiagtdva keasdiiltd dnftsivkav mwgrnvydsi
      841 skflqfqltv nvvavivaft gacitqdspl kavqmlwvnl imdtfaslal atepptdsll
      901 krrpygrnkp lisrtmmkni lghavyqlsv ifflvfagek ffdidsgrra plhsppsqhy
      961 tivfntfvlm qlfneinsrk ihgernvfsg ifrnlifcsv vlgtfvsqii ivefggkpfs
     1021 ctkltlsqwf wclfigigel lwgqvistip tqslkflkea ghgttkeeit kdaegldeid
     1081 haemelrrgq ilwfrglnri qtqikvvkaf hsslhesiqk prnqnsihnf mthpeftide
     1141 egprtpllde qeeeifekvs kpgtkmpspd gevtpqtnrn nnsvdccqvq ivashsdspl
     1201 hsletsv
//
LOCUS       XP_061015822            1207 aa            linear   MAM 02-DEC-2023
DEFINITION  plasma membrane calcium-transporting ATPase 4 isoform X1 [Dama
            dama].
ACCESSION   XP_061015822
VERSION     XP_061015822.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159839.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1207
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1207
                     /product="plasma membrane calcium-transporting ATPase 4
                     isoform X1"
                     /calculated_mol_wt=133672
     Region          20..1052
                     /region_name="ATPase-IIB_Ca"
                     /note="plasma-membrane calcium-translocating P-type
                     ATPase; TIGR01517"
                     /db_xref="CDD:273668"
     Region          1089..1135
                     /region_name="ATP_Ca_trans_C"
                     /note="Plasma membrane calcium transporter ATPase C
                     terminal; pfam12424"
                     /db_xref="CDD:463575"
     CDS             1..1207
                     /gene="ATP2B4"
                     /coded_by="XM_061159839.1:637..4260"
                     /db_xref="GeneID:133068921"
ORIGIN      
        1 mtnptehtlp ansilesreg efgctvmdlr klmelrssda idqinvhygg vmnlcsrlkt
       61 npveglsgnp adlekrkqvf gqnfippkkp ktflelvwea lqdvtliile iaaiislvls
      121 fyrppggene qcglavsspe degeaeagwi egaailfsvi ivvlvtafnd wskekqfrgl
      181 qnriekeqkf svirnghiiq lpvaeivvgd iaqikygdll padgiliqgn dlkidesslt
      241 gesdhvkksv erdpmllsgt hvmegsgrmv vtavginsqt giiftllgas egeeeekkkk
      301 gkkqgvpenr nkaktqdgva leiqplnsqe gidseekekk aaklpkkeks vlqgkltrla
      361 vqigkaglim saitvlilil yfvidnfviq rrpwlaectp iyvqyfvkff iigvtvlvva
      421 vpeglplavt islaysvkkm mkdnnlvrhl dacetmgnat aicsdktgtl tmnrmtvvqa
      481 yvgdtryhqi pnpedlvpkv ldlivngisi nsaytskilp pekegglprq vgnktecall
      541 gfvadlkqdy havrsevpee klykvytfns vrksmstvve rpgggfrmys kgaseiilrk
      601 cnrildkkge avpfknkdrd emvrtviepm aceglrtlci ayrdfsdgep pwdneseilt
      661 eltciavvgi edpvrpevpe aiakckragi tvrmvtgdni ntaraiatkc givtpgddfl
      721 clegkefnrl irnekgeveq ekldkiwpkl rvlarssptd khtlvkgiid stvgdqrqvv
      781 avtgdgtndg palkkadvgf amgiagtdva keasdiiltd dnftsivkav mwgrnvydsi
      841 skflqfqltv nvvavivaft gacitqdspl kavqmlwvnl imdtfaslal atepptdsll
      901 krrpygrnkp lisrtmmkni lghavyqlsv ifflvfagek ffdidsgrra plhsppsqhy
      961 tivfntfvlm qlfneinsrk ihgernvfsg ifrnlifcsv vlgtfvsqii ivefggkpfs
     1021 ctkltlsqwf wclfigigel lwgqvistip tqslkflkea ghgttkeeit kdaegldeid
     1081 haemelrrgq ilwfrglnri qtqikvvkaf hsslhesiqk prnqnsihnf mthpeftide
     1141 egprtpllde qeeeifekvs kpgtkmpspd gevtpqtnrn nnsvdccqvq ivashsdspl
     1201 hsletsv
//
LOCUS       XP_061015823            1195 aa            linear   MAM 02-DEC-2023
DEFINITION  plasma membrane calcium-transporting ATPase 4 isoform X2 [Dama
            dama].
ACCESSION   XP_061015823
VERSION     XP_061015823.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159840.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1195
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1195
                     /product="plasma membrane calcium-transporting ATPase 4
                     isoform X2"
                     /calculated_mol_wt=132335
     Region          20..1040
                     /region_name="ATPase-IIB_Ca"
                     /note="plasma-membrane calcium-translocating P-type
                     ATPase; TIGR01517"
                     /db_xref="CDD:273668"
     Region          1077..1123
                     /region_name="ATP_Ca_trans_C"
                     /note="Plasma membrane calcium transporter ATPase C
                     terminal; pfam12424"
                     /db_xref="CDD:463575"
     CDS             1..1195
                     /gene="ATP2B4"
                     /coded_by="XM_061159840.1:889..4476"
                     /db_xref="GeneID:133068921"
ORIGIN      
        1 mtnptehtlp ansilesreg efgctvmdlr klmelrssda idqinvhygg vmnlcsrlkt
       61 npveglsgnp adlekrkqvf gqnfippkkp ktflelvwea lqdvtliile iaaiislvls
      121 fyrppggene qcglavsspe degeaeagwi egaailfsvi ivvlvtafnd wskekqfrgl
      181 qnriekeqkf svirnghiiq lpvaeivvgd iaqikygdll padgiliqgn dlkidesslt
      241 gesdhvkksv erdpmllsgt hvmegsgrmv vtavginsqt giiftllgas egeeeekkkk
      301 aktqdgvale iqplnsqegi dseekekkaa klpkkeksvl qgkltrlavq igkaglimsa
      361 itvlililyf vidnfviqrr pwlaectpiy vqyfvkffii gvtvlvvavp eglplavtis
      421 laysvkkmmk dnnlvrhlda cetmgnatai csdktgtltm nrmtvvqayv gdtryhqipn
      481 pedlvpkvld livngisins aytskilppe kegglprqvg nktecallgf vadlkqdyha
      541 vrsevpeekl ykvytfnsvr ksmstvverp gggfrmyskg aseiilrkcn rildkkgeav
      601 pfknkdrdem vrtviepmac eglrtlciay rdfsdgeppw dneseiltel tciavvgied
      661 pvrpevpeai akckragitv rmvtgdnint araiatkcgi vtpgddflcl egkefnrlir
      721 nekgeveqek ldkiwpklrv larssptdkh tlvkgiidst vgdqrqvvav tgdgtndgpa
      781 lkkadvgfam giagtdvake asdiiltddn ftsivkavmw grnvydsisk flqfqltvnv
      841 vavivaftga citqdsplka vqmlwvnlim dtfaslalat epptdsllkr rpygrnkpli
      901 srtmmknilg havyqlsvif flvfagekff didsgrrapl hsppsqhyti vfntfvlmql
      961 fneinsrkih gernvfsgif rnlifcsvvl gtfvsqiiiv efggkpfsct kltlsqwfwc
     1021 lfigigellw gqvistiptq slkflkeagh gttkeeitkd aegldeidha emelrrgqil
     1081 wfrglnriqt qikvvkafhs slhesiqkpr nqnsihnfmt hpeftideeg prtplldeqe
     1141 eeifekvskp gtkmpspdge vtpqtnrnnn svdccqvqiv ashsdsplhs letsv
//
LOCUS       XP_061015824            1171 aa            linear   MAM 02-DEC-2023
DEFINITION  plasma membrane calcium-transporting ATPase 4 isoform X3 [Dama
            dama].
ACCESSION   XP_061015824
VERSION     XP_061015824.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159841.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1171
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1171
                     /product="plasma membrane calcium-transporting ATPase 4
                     isoform X3"
                     /calculated_mol_wt=129003
     Region          20..1052
                     /region_name="ATPase-IIB_Ca"
                     /note="plasma-membrane calcium-translocating P-type
                     ATPase; TIGR01517"
                     /db_xref="CDD:273668"
     Region          1089..1150
                     /region_name="ATP_Ca_trans_C"
                     /note="Plasma membrane calcium transporter ATPase C
                     terminal; pfam12424"
                     /db_xref="CDD:463575"
     CDS             1..1171
                     /gene="ATP2B4"
                     /coded_by="XM_061159841.1:896..4411"
                     /db_xref="GeneID:133068921"
ORIGIN      
        1 mtnptehtlp ansilesreg efgctvmdlr klmelrssda idqinvhygg vmnlcsrlkt
       61 npveglsgnp adlekrkqvf gqnfippkkp ktflelvwea lqdvtliile iaaiislvls
      121 fyrppggene qcglavsspe degeaeagwi egaailfsvi ivvlvtafnd wskekqfrgl
      181 qnriekeqkf svirnghiiq lpvaeivvgd iaqikygdll padgiliqgn dlkidesslt
      241 gesdhvkksv erdpmllsgt hvmegsgrmv vtavginsqt giiftllgas egeeeekkkk
      301 gkkqgvpenr nkaktqdgva leiqplnsqe gidseekekk aaklpkkeks vlqgkltrla
      361 vqigkaglim saitvlilil yfvidnfviq rrpwlaectp iyvqyfvkff iigvtvlvva
      421 vpeglplavt islaysvkkm mkdnnlvrhl dacetmgnat aicsdktgtl tmnrmtvvqa
      481 yvgdtryhqi pnpedlvpkv ldlivngisi nsaytskilp pekegglprq vgnktecall
      541 gfvadlkqdy havrsevpee klykvytfns vrksmstvve rpgggfrmys kgaseiilrk
      601 cnrildkkge avpfknkdrd emvrtviepm aceglrtlci ayrdfsdgep pwdneseilt
      661 eltciavvgi edpvrpevpe aiakckragi tvrmvtgdni ntaraiatkc givtpgddfl
      721 clegkefnrl irnekgeveq ekldkiwpkl rvlarssptd khtlvkgiid stvgdqrqvv
      781 avtgdgtndg palkkadvgf amgiagtdva keasdiiltd dnftsivkav mwgrnvydsi
      841 skflqfqltv nvvavivaft gacitqdspl kavqmlwvnl imdtfaslal atepptdsll
      901 krrpygrnkp lisrtmmkni lghavyqlsv ifflvfagek ffdidsgrra plhsppsqhy
      961 tivfntfvlm qlfneinsrk ihgernvfsg ifrnlifcsv vlgtfvsqii ivefggkpfs
     1021 ctkltlsqwf wclfigigel lwgqvistip tqslkflkea ghgttkeeit kdaegldeid
     1081 haemelrrgq ilwfrglnri qtqidvintf qtgasfkgvl krqtmgqhld vkhvpsssyv
     1141 tvapvksppt tsvaaavssp tlgnqsgqsv p
//
LOCUS       XP_061015825            1159 aa            linear   MAM 02-DEC-2023
DEFINITION  plasma membrane calcium-transporting ATPase 4 isoform X4 [Dama
            dama].
ACCESSION   XP_061015825
VERSION     XP_061015825.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159842.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1159
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1159
                     /product="plasma membrane calcium-transporting ATPase 4
                     isoform X4"
                     /calculated_mol_wt=127666
     Region          20..1040
                     /region_name="ATPase-IIB_Ca"
                     /note="plasma-membrane calcium-translocating P-type
                     ATPase; TIGR01517"
                     /db_xref="CDD:273668"
     Region          1077..1138
                     /region_name="ATP_Ca_trans_C"
                     /note="Plasma membrane calcium transporter ATPase C
                     terminal; pfam12424"
                     /db_xref="CDD:463575"
     CDS             1..1159
                     /gene="ATP2B4"
                     /coded_by="XM_061159842.1:896..4375"
                     /db_xref="GeneID:133068921"
ORIGIN      
        1 mtnptehtlp ansilesreg efgctvmdlr klmelrssda idqinvhygg vmnlcsrlkt
       61 npveglsgnp adlekrkqvf gqnfippkkp ktflelvwea lqdvtliile iaaiislvls
      121 fyrppggene qcglavsspe degeaeagwi egaailfsvi ivvlvtafnd wskekqfrgl
      181 qnriekeqkf svirnghiiq lpvaeivvgd iaqikygdll padgiliqgn dlkidesslt
      241 gesdhvkksv erdpmllsgt hvmegsgrmv vtavginsqt giiftllgas egeeeekkkk
      301 aktqdgvale iqplnsqegi dseekekkaa klpkkeksvl qgkltrlavq igkaglimsa
      361 itvlililyf vidnfviqrr pwlaectpiy vqyfvkffii gvtvlvvavp eglplavtis
      421 laysvkkmmk dnnlvrhlda cetmgnatai csdktgtltm nrmtvvqayv gdtryhqipn
      481 pedlvpkvld livngisins aytskilppe kegglprqvg nktecallgf vadlkqdyha
      541 vrsevpeekl ykvytfnsvr ksmstvverp gggfrmyskg aseiilrkcn rildkkgeav
      601 pfknkdrdem vrtviepmac eglrtlciay rdfsdgeppw dneseiltel tciavvgied
      661 pvrpevpeai akckragitv rmvtgdnint araiatkcgi vtpgddflcl egkefnrlir
      721 nekgeveqek ldkiwpklrv larssptdkh tlvkgiidst vgdqrqvvav tgdgtndgpa
      781 lkkadvgfam giagtdvake asdiiltddn ftsivkavmw grnvydsisk flqfqltvnv
      841 vavivaftga citqdsplka vqmlwvnlim dtfaslalat epptdsllkr rpygrnkpli
      901 srtmmknilg havyqlsvif flvfagekff didsgrrapl hsppsqhyti vfntfvlmql
      961 fneinsrkih gernvfsgif rnlifcsvvl gtfvsqiiiv efggkpfsct kltlsqwfwc
     1021 lfigigellw gqvistiptq slkflkeagh gttkeeitkd aegldeidha emelrrgqil
     1081 wfrglnriqt qidvintfqt gasfkgvlkr qtmgqhldvk hvpsssyvtv apvkspptts
     1141 vaaavssptl gnqsgqsvp
//
LOCUS       XP_061015826            1243 aa            linear   MAM 02-DEC-2023
DEFINITION  plasma membrane calcium-transporting ATPase 4 isoform X5 [Dama
            dama].
ACCESSION   XP_061015826
VERSION     XP_061015826.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159843.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1243
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1243
                     /product="plasma membrane calcium-transporting ATPase 4
                     isoform X5"
                     /calculated_mol_wt=137644
     Region          20..1052
                     /region_name="ATPase-IIB_Ca"
                     /note="plasma-membrane calcium-translocating P-type
                     ATPase; TIGR01517"
                     /db_xref="CDD:273668"
     Region          1089..1171
                     /region_name="ATP_Ca_trans_C"
                     /note="Plasma membrane calcium transporter ATPase C
                     terminal; pfam12424"
                     /db_xref="CDD:463575"
     CDS             1..1243
                     /gene="ATP2B4"
                     /coded_by="XM_061159843.1:892..4623"
                     /db_xref="GeneID:133068921"
ORIGIN      
        1 mtnptehtlp ansilesreg efgctvmdlr klmelrssda idqinvhygg vmnlcsrlkt
       61 npveglsgnp adlekrkqvf gqnfippkkp ktflelvwea lqdvtliile iaaiislvls
      121 fyrppggene qcglavsspe degeaeagwi egaailfsvi ivvlvtafnd wskekqfrgl
      181 qnriekeqkf svirnghiiq lpvaeivvgd iaqikygdll padgiliqgn dlkidesslt
      241 gesdhvkksv erdpmllsgt hvmegsgrmv vtavginsqt giiftllgas egeeeekkkk
      301 gkkqgvpenr nkaktqdgva leiqplnsqe gidseekekk aaklpkkeks vlqgkltrla
      361 vqigkaglim saitvlilil yfvidnfviq rrpwlaectp iyvqyfvkff iigvtvlvva
      421 vpeglplavt islaysvkkm mkdnnlvrhl dacetmgnat aicsdktgtl tmnrmtvvqa
      481 yvgdtryhqi pnpedlvpkv ldlivngisi nsaytskilp pekegglprq vgnktecall
      541 gfvadlkqdy havrsevpee klykvytfns vrksmstvve rpgggfrmys kgaseiilrk
      601 cnrildkkge avpfknkdrd emvrtviepm aceglrtlci ayrdfsdgep pwdneseilt
      661 eltciavvgi edpvrpevpe aiakckragi tvrmvtgdni ntaraiatkc givtpgddfl
      721 clegkefnrl irnekgeveq ekldkiwpkl rvlarssptd khtlvkgiid stvgdqrqvv
      781 avtgdgtndg palkkadvgf amgiagtdva keasdiiltd dnftsivkav mwgrnvydsi
      841 skflqfqltv nvvavivaft gacitqdspl kavqmlwvnl imdtfaslal atepptdsll
      901 krrpygrnkp lisrtmmkni lghavyqlsv ifflvfagek ffdidsgrra plhsppsqhy
      961 tivfntfvlm qlfneinsrk ihgernvfsg ifrnlifcsv vlgtfvsqii ivefggkpfs
     1021 ctkltlsqwf wclfigigel lwgqvistip tqslkflkea ghgttkeeit kdaegldeid
     1081 haemelrrgq ilwfrglnri qtqidvintf qtgasfkgvl krqtmgqhld vkhvpsssyi
     1141 kvvkafhssl hesiqkprnq nsihnfmthp eftideegpr tplldeqeee ifekvskpgt
     1201 kmpspdgevt pqtnrnnnsv dccqvqivas hsdsplhsle tsv
//
LOCUS       XP_061015827             378 aa            linear   MAM 02-DEC-2023
DEFINITION  lymphocyte transmembrane adapter 1 isoform X1 [Dama dama].
ACCESSION   XP_061015827
VERSION     XP_061015827.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159844.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..378
                     /product="lymphocyte transmembrane adapter 1 isoform X1"
                     /calculated_mol_wt=40847
     Region          29..378
                     /region_name="LAX"
                     /note="Lymphocyte activation family X; pfam15681"
                     /db_xref="CDD:464799"
     CDS             1..378
                     /gene="LAX1"
                     /coded_by="XM_061159844.1:470..1606"
                     /db_xref="GeneID:133068923"
ORIGIN      
        1 mdvttsvhse ttgrtsepst lqgtlgsldk aedhsssifs gfaallaill vvavfcvlwn
       61 cskrkkrqvp ylrvtlmpll tlprprqrak niydllprrq eepgrhpsrs irivstesll
      121 srnsdsppse hvpsqagdal hmhgahtham gyavgiydna mrpqlcgnla psahyvnvra
      181 srgypstsse esrdyvnipt akeiaetlas tsnppgnlfi lpstkelals eeidegcgna
      241 sdctslgspg tensdplsdg egssqtsndy vnvaeldlgt pqgkqlrgmf qcrrdyenvp
      301 pgpssnkqqe eevtssntdh vegrtdgpet hvppavqsgs flalkdyvac qssahsengp
      361 wkraeetsse dshdyenv
//
LOCUS       XP_061015828             378 aa            linear   MAM 02-DEC-2023
DEFINITION  lymphocyte transmembrane adapter 1 isoform X1 [Dama dama].
ACCESSION   XP_061015828
VERSION     XP_061015828.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159845.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..378
                     /product="lymphocyte transmembrane adapter 1 isoform X1"
                     /calculated_mol_wt=40847
     Region          29..378
                     /region_name="LAX"
                     /note="Lymphocyte activation family X; pfam15681"
                     /db_xref="CDD:464799"
     CDS             1..378
                     /gene="LAX1"
                     /coded_by="XM_061159845.1:467..1603"
                     /db_xref="GeneID:133068923"
ORIGIN      
        1 mdvttsvhse ttgrtsepst lqgtlgsldk aedhsssifs gfaallaill vvavfcvlwn
       61 cskrkkrqvp ylrvtlmpll tlprprqrak niydllprrq eepgrhpsrs irivstesll
      121 srnsdsppse hvpsqagdal hmhgahtham gyavgiydna mrpqlcgnla psahyvnvra
      181 srgypstsse esrdyvnipt akeiaetlas tsnppgnlfi lpstkelals eeidegcgna
      241 sdctslgspg tensdplsdg egssqtsndy vnvaeldlgt pqgkqlrgmf qcrrdyenvp
      301 pgpssnkqqe eevtssntdh vegrtdgpet hvppavqsgs flalkdyvac qssahsengp
      361 wkraeetsse dshdyenv
//
LOCUS       XP_061015829             340 aa            linear   MAM 02-DEC-2023
DEFINITION  lymphocyte transmembrane adapter 1 isoform X2 [Dama dama].
ACCESSION   XP_061015829
VERSION     XP_061015829.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159846.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..340
                     /product="lymphocyte transmembrane adapter 1 isoform X2"
                     /calculated_mol_wt=36883
     Region          29..340
                     /region_name="LAX"
                     /note="Lymphocyte activation family X; pfam15681"
                     /db_xref="CDD:464799"
     CDS             1..340
                     /gene="LAX1"
                     /coded_by="XM_061159846.1:474..1496"
                     /db_xref="GeneID:133068923"
ORIGIN      
        1 msphqctrrp qggpqspalc repsavwtrq vpylrvtlmp lltlprprqr akniydllpr
       61 rqeepgrhps rsirivstes llsrnsdspp sehvpsqagd alhmhgahth amgyavgiyd
      121 namrpqlcgn lapsahyvnv rasrgypsts seesrdyvni ptakeiaetl astsnppgnl
      181 filpstkela lseeidegcg nasdctslgs pgtensdpls dgegssqtsn dyvnvaeldl
      241 gtpqgkqlrg mfqcrrdyen vppgpssnkq qeeevtssnt dhvegrtdgp ethvppavqs
      301 gsflalkdyv acqssahsen gpwkraeets sedshdyenv
//
LOCUS       XP_061015830             340 aa            linear   MAM 02-DEC-2023
DEFINITION  lymphocyte transmembrane adapter 1 isoform X2 [Dama dama].
ACCESSION   XP_061015830
VERSION     XP_061015830.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159847.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..340
                     /product="lymphocyte transmembrane adapter 1 isoform X2"
                     /calculated_mol_wt=36883
     Region          29..340
                     /region_name="LAX"
                     /note="Lymphocyte activation family X; pfam15681"
                     /db_xref="CDD:464799"
     CDS             1..340
                     /gene="LAX1"
                     /coded_by="XM_061159847.1:471..1493"
                     /db_xref="GeneID:133068923"
ORIGIN      
        1 msphqctrrp qggpqspalc repsavwtrq vpylrvtlmp lltlprprqr akniydllpr
       61 rqeepgrhps rsirivstes llsrnsdspp sehvpsqagd alhmhgahth amgyavgiyd
      121 namrpqlcgn lapsahyvnv rasrgypsts seesrdyvni ptakeiaetl astsnppgnl
      181 filpstkela lseeidegcg nasdctslgs pgtensdpls dgegssqtsn dyvnvaeldl
      241 gtpqgkqlrg mfqcrrdyen vppgpssnkq qeeevtssnt dhvegrtdgp ethvppavqs
      301 gsflalkdyv acqssahsen gpwkraeets sedshdyenv
//
LOCUS       XP_061015831             979 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger BED domain-containing protein 6 [Dama dama].
ACCESSION   XP_061015831
VERSION     XP_061015831.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159848.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..979
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..979
                     /product="zinc finger BED domain-containing protein 6"
                     /calculated_mol_wt=109342
     Region          134..181
                     /region_name="ZnF_BED"
                     /note="BED zinc finger; smart00614"
                     /db_xref="CDD:214746"
     Region          268..314
                     /region_name="ZnF_BED"
                     /note="BED zinc finger; smart00614"
                     /db_xref="CDD:214746"
     Region          869..949
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     CDS             1..979
                     /gene="ZBED6"
                     /coded_by="XM_061159848.1:1046..3985"
                     /db_xref="GeneID:133068924"
ORIGIN      
        1 msvctlsvpv sslspgrrcs tysgagilgc vpipsntdee dvvegkmvag mdkeaelptk
       61 kkrkkglrik gkrrrkklil akkfskdlvs grsvadaptl ldssapeqde eslfesniek
      121 qiylpstrak tsivwhffhv dpqytwraic nlceksvsrg kpgshlgtst lqrhlqarhs
      181 phwtrankfg vtsgeedftl daplspssag ssgsfeyipa dplengmgkk rdksvsdalr
      241 aqrgrfliks nivkhalipg traktsavwn ffytdpqhis ravcnickrs vsrgrpgshl
      301 gtstlqrhlq athpihwava nkdsgavgng ldeaeternd llsdtlrgek saggqdvaae
      361 hlsdsdsdep pvlevenrrs esptpvaeqd tqmhaqeqet aycenstssq isqaiiqmiv
      421 edmhpynyfs tpafqrflqi vapdyrlpse tyfftkavpq lydsvrekif ltlenvqtqk
      481 ihltvdmwth dpstdyfivt vhwvslettt sfnngripnf rrwavlcvtg laknclitni
      541 lqelndqvgl wlspnflips fivsdsssnv vhavkdggft hvpcflrcln iviqdffceh
      601 ksienmlvaa rktchhfshs vkarqilqef qndhqlpwkn lkqdeaghwi stfymlkwll
      661 ehcysvhhsl grasgvvlts lqwtlmtyvc dilkpfeeat qkvsvktigl nhvlplihhl
      721 llslqklred fqvrgitqal nlvdslslkl etdtllsaml kskpcilatl ldpcfknslg
      781 dffpqgadle tykqilaeev cnymesspev chiatseasg psaivgadsf tssiregtsi
      841 sgsvdssaad nvavggkslm fpsamaivde yfkekyseis ggddplfywq kkvnvwpalt
      901 qvaiqylscp mcswqsecvf tanshfhpkq imsldfdnie qlmflkmnlk nvnydysalv
      961 lswdpenevi qsnekeils
//
LOCUS       XP_061015832             816 aa            linear   MAM 02-DEC-2023
DEFINITION  zinc finger CCCH domain-containing protein 11A [Dama dama].
ACCESSION   XP_061015832
VERSION     XP_061015832.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159849.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..816
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..816
                     /product="zinc finger CCCH domain-containing protein 11A"
                     /calculated_mol_wt=89827
     Region          1..110
                     /region_name="zf-CCCH_3"
                     /note="Zinc-finger containing family; pfam15663"
                     /db_xref="CDD:464787"
     Region          <304..583
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     CDS             1..816
                     /gene="ZC3H11A"
                     /coded_by="XM_061159849.1:269..2719"
                     /db_xref="GeneID:133068925"
ORIGIN      
        1 mpnqgedcyf ffystctkgd scpfrhceaa lgnetvctlw qegrcfrqvc rfrhmeidkk
       61 rseipcywen qpmgcqklnc afhhnrgryv dglflppskt vlptvpespe eevkasqltv
      121 qqsklsvqsn pspqlrsvmk vessenvpsp thppvvinaa dddeddddqf seegdetktp
      181 tlqptlevhn glrmtstrkp gvnlkqgesl nfgiktleei kskkmkeksk kqgegssgvs
      241 slllqsqpmp gpekenvrtv vrtvtlsnkq gdeplvrlsl terlgkrkfs vggdndpplk
      301 rslaqrlgrk ieapetntdk apkkvqvsks lkerlgmstg pnseeaaekv tkvgeihvkt
      361 leeilleran qkrgelqtkl ktegpskvdd stsgartsst iriktfsevl aekkhrqqea
      421 erqkgkkdms cvklktdnei kktvilpptv asrgqseepa graksmqevh iktleeikle
      481 kalrvqqsse sstssqpqpe ttpaakrllr itkktgikee kklqeesdva sqssvsraea
      541 kkasdetttv gmtkiqvkrc ktmrekyvpk lpekgasqke ksiltplrgd llsystelae
      601 kpvlttvlgi trhltkrlps kssqkakvet sgigdsvlnv kcatqplekr skakpkvnvk
      661 psvvkvvssp klapkrkame ahpaviaavk plnsssvlqe spakkaavai vpllsedksv
      721 ivpetekprd sfllppaqss sepptpevsg psssqmatkt rrlssastgk pplsmeddfe
      781 kliweisggk leaeidldpg kdeddlllel semids
//
LOCUS       XP_061015833              32 aa            linear   MAM 02-DEC-2023
DEFINITION  uncharacterized LOC128031836 homolog [Dama dama].
ACCESSION   XP_061015833
VERSION     XP_061015833.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159850.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..32
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..32
                     /product="uncharacterized LOC128031836 homolog"
                     /calculated_mol_wt=3551
     CDS             1..32
                     /gene="LOC133068926"
                     /coded_by="XM_061159850.1:1..99"
                     /db_xref="GeneID:133068926"
ORIGIN      
        1 mavmllclrq laaplcsysv tihlylfwln tp
//
LOCUS       XP_061015834              92 aa            linear   MAM 02-DEC-2023
DEFINITION  small nuclear ribonucleoprotein E isoform X1 [Dama dama].
ACCESSION   XP_061015834
VERSION     XP_061015834.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159851.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..92
                     /product="small nuclear ribonucleoprotein E isoform X1"
                     /calculated_mol_wt=10672
     Region          11..89
                     /region_name="Sm_E"
                     /note="Sm protein E; cd01718"
                     /db_xref="CDD:212465"
     Site            order(24,36,38,41,48..51,55,63,72,74,76..80,83..89)
                     /site_type="other"
                     /note="heptamer interface [polypeptide binding]"
                     /db_xref="CDD:212465"
     Site            order(33..39,41..53,55..59)
                     /site_type="other"
                     /note="Sm1 motif"
                     /db_xref="CDD:212465"
     Site            order(51,53..55,80,82)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:212465"
     Site            76..87
                     /site_type="other"
                     /note="Sm2 motif"
                     /db_xref="CDD:212465"
     CDS             1..92
                     /gene="SNRPE"
                     /coded_by="XM_061159851.1:88..366"
                     /db_xref="GeneID:133068927"
ORIGIN      
        1 mayrgqgqkv qkvmvqpinl ifrylqnrsr iqvwlyeqvn mriegciigf deymnlvldd
       61 aeeihsktks rkqlgrimlk gdnitllqsv sn
//
LOCUS       XP_061015835              86 aa            linear   MAM 02-DEC-2023
DEFINITION  small nuclear ribonucleoprotein E isoform X2 [Dama dama].
ACCESSION   XP_061015835
VERSION     XP_061015835.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159852.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..86
                     /product="small nuclear ribonucleoprotein E isoform X2"
                     /calculated_mol_wt=10005
     Region          13..83
                     /region_name="Sm_E"
                     /note="Sm protein E; cd01718"
                     /db_xref="CDD:212465"
     Site            order(18,30,32,35,42..45,49,57,66,68,70..74,77..83)
                     /site_type="other"
                     /note="heptamer interface [polypeptide binding]"
                     /db_xref="CDD:212465"
     Site            order(27..33,35..47,49..53)
                     /site_type="other"
                     /note="Sm1 motif"
                     /db_xref="CDD:212465"
     Site            order(45,47..49,74,76)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:212465"
     Site            70..81
                     /site_type="other"
                     /note="Sm2 motif"
                     /db_xref="CDD:212465"
     CDS             1..86
                     /gene="SNRPE"
                     /coded_by="XM_061159852.1:68..328"
                     /db_xref="GeneID:133068927"
ORIGIN      
        1 mayrgqgqkv qknlifrylq nrsriqvwly eqvnmriegc iigfdeymnl vlddaeeihs
       61 ktksrkqlgr imlkgdnitl lqsvsn
//
LOCUS       XP_061015836              77 aa            linear   MAM 02-DEC-2023
DEFINITION  small nuclear ribonucleoprotein E isoform X3 [Dama dama].
ACCESSION   XP_061015836
VERSION     XP_061015836.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159853.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..77
                     /product="small nuclear ribonucleoprotein E isoform X3"
                     /calculated_mol_wt=8842
     Region          11..74
                     /region_name="Sm_E"
                     /note="Sm protein E; cd01718"
                     /db_xref="CDD:212465"
     Site            order(18..24,26..38,40..44)
                     /site_type="other"
                     /note="Sm1 motif"
                     /db_xref="CDD:212465"
     Site            order(21,23,26,33..36,40,48,57,59,61..65,68..74)
                     /site_type="other"
                     /note="heptamer interface [polypeptide binding]"
                     /db_xref="CDD:212465"
     Site            order(36,38..40,65,67)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:212465"
     Site            61..72
                     /site_type="other"
                     /note="Sm2 motif"
                     /db_xref="CDD:212465"
     CDS             1..77
                     /gene="SNRPE"
                     /coded_by="XM_061159853.1:72..305"
                     /db_xref="GeneID:133068927"
ORIGIN      
        1 mayrgqgqkv qkrsriqvwl yeqvnmrieg ciigfdeymn lvlddaeeih sktksrkqlg
       61 rimlkgdnit llqsvsn
//
LOCUS       XP_061015837             624 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor SOX-13 isoform X1 [Dama dama].
ACCESSION   XP_061015837
VERSION     XP_061015837.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159854.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..624
                     /product="transcription factor SOX-13 isoform X1"
                     /calculated_mol_wt=69110
     Region          <235..>342
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          425..501
                     /region_name="HMG-box_SoxD"
                     /note="high mobility group (HMG)-box found in group D
                     SRY-related high-mobility group (HMG) box (Sox)
                     transcription factors; cd22030"
                     /db_xref="CDD:438839"
     Site            order(425,427..428,430..431,433..434,438,441,445,452..454,
                     457..458,461,464..465,483,493,495..498)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438839"
     CDS             1..624
                     /gene="SOX13"
                     /coded_by="XM_061159854.1:2..1876"
                     /db_xref="GeneID:133068928"
ORIGIN      
        1 msmrspgsaq lvldevgtmv nctvkaegkk epcheaprgs asadelqpgd parppqdgad
       61 qqapaqgdrd iqsvlqdgsp lensespepr rpggseaasg sqerldfnrn lkevvpaiek
      121 llssdwkekf lgrssvetkd vkgtkeslae kelqllvmih qlsalrdqll tahseqknma
      181 amllekqqqq melarqqqeq iakqqqqliq qqhkinllqq qiqvnmpyvm ipafppshqp
      241 lpvtpdsqla lpiqpipckp veyplqllhs ppapvvkrpg alsahhplqe psqplnltak
      301 pkaselpnss sspnlklsnc gprppshgap tldlqanpps lplgflgegd avtkaiqdar
      361 qllhshsgal daspsapfrk dligvdtspa kerledscvh pleeamlgcd mdgsrhfpes
      421 rnsshikrpm nafmvwakde rrkilqafpd mhnssiskil gsrwksmsnq ekqpyyeeqa
      481 rlsrqhleky pdykykprpk rtcivegkrl rvgeykalmr trrqdarqsy atpqqtgqvq
      541 tspsevlypr vaglplaqpl vehyvprgld pnmpvivntc slreegegpe drhsvadgem
      601 frfsededse geeksdgelv vltd
//
LOCUS       XP_061015838             619 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor SOX-13 isoform X2 [Dama dama].
ACCESSION   XP_061015838
VERSION     XP_061015838.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159855.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..619
                     /product="transcription factor SOX-13 isoform X2"
                     /calculated_mol_wt=68554
     Region          420..496
                     /region_name="HMG-box_SoxD"
                     /note="high mobility group (HMG)-box found in group D
                     SRY-related high-mobility group (HMG) box (Sox)
                     transcription factors; cd22030"
                     /db_xref="CDD:438839"
     Site            order(420,422..423,425..426,428..429,433,436,440,447..449,
                     452..453,456,459..460,478,488,490..493)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438839"
     CDS             1..619
                     /gene="SOX13"
                     /coded_by="XM_061159855.1:2..1861"
                     /db_xref="GeneID:133068928"
ORIGIN      
        1 msmrspgsaq lvldevgtmv nctvkaegkk epcheaprgs asadelqpgd parppqdgad
       61 qqapaqsvlq dgsplenses peprrpggse aasgsqerld fnrnlkevvp aiekllssdw
      121 kekflgrssv etkdvkgtke slaekelqll vmihqlsalr dqlltahseq knmaamllek
      181 qqqqmelarq qqeqiakqqq qliqqqhkin llqqqiqqvn mpyvmipafp pshqplpvtp
      241 dsqlalpiqp ipckpveypl qllhsppapv vkrpgalsah hplqepsqpl nltakpkase
      301 lpnsssspnl klsncgprpp shgaptldlq anppslplgf lgegdavtka iqdarqllhs
      361 hsgaldasps apfrkdligv dtspakerle dscvhpleea mlgcdmdgsr hfpesrnssh
      421 ikrpmnafmv wakderrkil qafpdmhnss iskilgsrwk smsnqekqpy yeeqarlsrq
      481 hlekypdyky kprpkrtciv egkrlrvgey kalmrtrrqd arqsyatpqq tgqvqtspse
      541 vlyprvaglp laqplvehyv prgldpnmpv ivntcslree gegpedrhsv adgemfrfse
      601 dedsegeeks dgelvvltd
//
LOCUS       XP_061015839             615 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor SOX-13 isoform X3 [Dama dama].
ACCESSION   XP_061015839
VERSION     XP_061015839.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159856.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..615
                     /product="transcription factor SOX-13 isoform X3"
                     /calculated_mol_wt=68126
     Region          416..492
                     /region_name="HMG-box_SoxD"
                     /note="high mobility group (HMG)-box found in group D
                     SRY-related high-mobility group (HMG) box (Sox)
                     transcription factors; cd22030"
                     /db_xref="CDD:438839"
     Site            order(416,418..419,421..422,424..425,429,432,436,443..445,
                     448..449,452,455..456,474,484,486..489)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438839"
     CDS             1..615
                     /gene="SOX13"
                     /coded_by="XM_061159856.1:2..1849"
                     /db_xref="GeneID:133068928"
ORIGIN      
        1 msmrspgsaq lvldevgtmv nctvkaegkk epcheaprgs asadelqpgd parppqdgad
       61 qqapaqdgsp lensespepr rpggseaasg sqerldfnrn lkevvpaiek llssdwkekf
      121 lgrssvetkd vkgtkeslae kelqllvmih qlsalrdqll tahseqknma amllekqqqq
      181 melarqqqeq iakqqqqliq qqhkinllqq qiqqvnmpyv mipafppshq plpvtpdsql
      241 alpiqpipck pveyplqllh sppapvvkrp galsahhplq epsqplnlta kpkaselpns
      301 ssspnlklsn cgprppshga ptldlqanpp slplgflgeg davtkaiqda rqllhshsga
      361 ldaspsapfr kdligvdtsp akerledscv hpleeamlgc dmdgsrhfpe srnsshikrp
      421 mnafmvwakd errkilqafp dmhnssiski lgsrwksmsn qekqpyyeeq arlsrqhlek
      481 ypdykykprp krtcivegkr lrvgeykalm rtrrqdarqs yatpqqtgqv qtspsevlyp
      541 rvaglplaqp lvehyvprgl dpnmpvivnt cslreegegp edrhsvadge mfrfsededs
      601 egeeksdgel vvltd
//
LOCUS       XP_061015840             614 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor SOX-13 isoform X4 [Dama dama].
ACCESSION   XP_061015840
VERSION     XP_061015840.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159857.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..614
                     /product="transcription factor SOX-13 isoform X4"
                     /calculated_mol_wt=67998
     Region          <225..>332
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          415..491
                     /region_name="HMG-box_SoxD"
                     /note="high mobility group (HMG)-box found in group D
                     SRY-related high-mobility group (HMG) box (Sox)
                     transcription factors; cd22030"
                     /db_xref="CDD:438839"
     Site            order(415,417..418,420..421,423..424,428,431,435,442..444,
                     447..448,451,454..455,473,483,485..488)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438839"
     CDS             1..614
                     /gene="SOX13"
                     /coded_by="XM_061159857.1:2..1846"
                     /db_xref="GeneID:133068928"
ORIGIN      
        1 msmrspgsaq lvldevgtmv nctvkaegkk epcheaprgs asadelqpgd parppqdgad
       61 qqapaqdgsp lensespepr rpggseaasg sqerldfnrn lkevvpaiek llssdwkekf
      121 lgrssvetkd vkgtkeslae kelqllvmih qlsalrdqll tahseqknma amllekqqqq
      181 melarqqqeq iakqqqqliq qqhkinllqq qiqvnmpyvm ipafppshqp lpvtpdsqla
      241 lpiqpipckp veyplqllhs ppapvvkrpg alsahhplqe psqplnltak pkaselpnss
      301 sspnlklsnc gprppshgap tldlqanpps lplgflgegd avtkaiqdar qllhshsgal
      361 daspsapfrk dligvdtspa kerledscvh pleeamlgcd mdgsrhfpes rnsshikrpm
      421 nafmvwakde rrkilqafpd mhnssiskil gsrwksmsnq ekqpyyeeqa rlsrqhleky
      481 pdykykprpk rtcivegkrl rvgeykalmr trrqdarqsy atpqqtgqvq tspsevlypr
      541 vaglplaqpl vehyvprgld pnmpvivntc slreegegpe drhsvadgem frfsededse
      601 geeksdgelv vltd
//
LOCUS       XP_061015841             598 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor SOX-13 isoform X5 [Dama dama].
ACCESSION   XP_061015841
VERSION     XP_061015841.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159858.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..598
                     /product="transcription factor SOX-13 isoform X5"
                     /calculated_mol_wt=65586
     Region          426..>463
                     /region_name="HMG-box_SF"
                     /note="high mobility group (HMG)-box domain superfamily;
                     cl00082"
                     /db_xref="CDD:469606"
     CDS             1..598
                     /gene="SOX13"
                     /coded_by="XM_061159858.1:19..1815"
                     /db_xref="GeneID:133068928"
ORIGIN      
        1 msmrspgsaq lvldevgtmv nctvkaegkk epcheaprgs asadelqpgd parppqdgad
       61 qqapaqgdrd iqsvlqdgsp lensespepr rpggseaasg sqerldfnrn lkevvpaiek
      121 llssdwkekf lgrssvetkd vkgtkeslae kelqllvmih qlsalrdqll tahseqknma
      181 amllekqqqq melarqqqeq iakqqqqliq qqhkinllqq qiqqvnmpyv mipafppshq
      241 plpvtpdsql alpiqpipck pveyplqllh sppapvvkrp galsahhplq epsqplnlta
      301 kpkaselpns ssspnlklsn cgprppshga ptldlqanpp slplgflgeg davtkaiqda
      361 rqllhshsga ldaspsapfr kdligvdtsp akerledscv hpleeamlgc dmdgsrhfpe
      421 srnsshikrp mnafmvwakd errkilqafp dmhnssiski lasrparcrr aprksctrgw
      481 qacpshspww sttcpaawtq tcpssstpaa sgrraraqrt gtrwlmvrcs gsartrtrra
      541 rrrataswwc srtdpggpsp allpaetwaq pprplvlglg parrwaqlcv wrcirggr
//
LOCUS       XP_061015842             625 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor SOX-13 isoform X6 [Dama dama].
ACCESSION   XP_061015842
VERSION     XP_061015842.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159859.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..625
                     /product="transcription factor SOX-13 isoform X6"
                     /calculated_mol_wt=69238
     Region          426..502
                     /region_name="HMG-box_SoxD"
                     /note="high mobility group (HMG)-box found in group D
                     SRY-related high-mobility group (HMG) box (Sox)
                     transcription factors; cd22030"
                     /db_xref="CDD:438839"
     Site            order(426,428..429,431..432,434..435,439,442,446,453..455,
                     458..459,462,465..466,484,494,496..499)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438839"
     CDS             1..625
                     /gene="SOX13"
                     /coded_by="XM_061159859.1:116..1993"
                     /db_xref="GeneID:133068928"
ORIGIN      
        1 msmrspgsaq lvldevgtmv nctvkaegkk epcheaprgs asadelqpgd parppqdgad
       61 qqapaqgdrd iqsvlqdgsp lensespepr rpggseaasg sqerldfnrn lkevvpaiek
      121 llssdwkekf lgrssvetkd vkgtkeslae kelqllvmih qlsalrdqll tahseqknma
      181 amllekqqqq melarqqqeq iakqqqqliq qqhkinllqq qiqqvnmpyv mipafppshq
      241 plpvtpdsql alpiqpipck pveyplqllh sppapvvkrp galsahhplq epsqplnlta
      301 kpkaselpns ssspnlklsn cgprppshga ptldlqanpp slplgflgeg davtkaiqda
      361 rqllhshsga ldaspsapfr kdligvdtsp akerledscv hpleeamlgc dmdgsrhfpe
      421 srnsshikrp mnafmvwakd errkilqafp dmhnssiski lgsrwksmsn qekqpyyeeq
      481 arlsrqhlek ypdykykprp krtcivegkr lrvgeykalm rtrrqdarqs yatpqqtgqv
      541 qtspsevlyp rvaglplaqp lvehyvprgl dpnmpvivnt cslreegegp edrhsvadge
      601 mfrfsededs egeeksdgel vvltd
//
LOCUS       XP_061015843             534 aa            linear   MAM 02-DEC-2023
DEFINITION  transcription factor SOX-13 isoform X7 [Dama dama].
ACCESSION   XP_061015843
VERSION     XP_061015843.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159860.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..534
                     /product="transcription factor SOX-13 isoform X7"
                     /calculated_mol_wt=59246
     Region          426..502
                     /region_name="HMG-box_SoxD"
                     /note="high mobility group (HMG)-box found in group D
                     SRY-related high-mobility group (HMG) box (Sox)
                     transcription factors; cd22030"
                     /db_xref="CDD:438839"
     Site            order(426,428..429,431..432,434..435,439,442,446,453..455,
                     458..459,462,465..466,484,494,496..499)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438839"
     CDS             1..534
                     /gene="SOX13"
                     /coded_by="XM_061159860.1:19..1623"
                     /db_xref="GeneID:133068928"
ORIGIN      
        1 msmrspgsaq lvldevgtmv nctvkaegkk epcheaprgs asadelqpgd parppqdgad
       61 qqapaqgdrd iqsvlqdgsp lensespepr rpggseaasg sqerldfnrn lkevvpaiek
      121 llssdwkekf lgrssvetkd vkgtkeslae kelqllvmih qlsalrdqll tahseqknma
      181 amllekqqqq melarqqqeq iakqqqqliq qqhkinllqq qiqqvnmpyv mipafppshq
      241 plpvtpdsql alpiqpipck pveyplqllh sppapvvkrp galsahhplq epsqplnlta
      301 kpkaselpns ssspnlklsn cgprppshga ptldlqanpp slplgflgeg davtkaiqda
      361 rqllhshsga ldaspsapfr kdligvdtsp akerledscv hpleeamlgc dmdgsrhfpe
      421 srnsshikrp mnafmvwakd errkilqafp dmhnssiski lgsrwksmsn qekqpyyeeq
      481 arlsrqhlek ypdykykprp krtcivegkr lrvgeykalm rtrrqdarqs yatp
//
LOCUS       XP_061015845             205 aa            linear   MAM 02-DEC-2023
DEFINITION  metastasis-suppressor KiSS-1 [Dama dama].
ACCESSION   XP_061015845
VERSION     XP_061015845.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159862.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..205
                     /product="metastasis-suppressor KiSS-1"
                     /calculated_mol_wt=21561
     Region          116..190
                     /region_name="Kisspeptin"
                     /note="pfam15152"
                     /db_xref="CDD:434504"
     CDS             1..205
                     /gene="KISS1"
                     /coded_by="XM_061159862.1:799..1416"
                     /db_xref="GeneID:133068930"
ORIGIN      
        1 mgggarggcv pgdvtlgfir avirapvsvs pgaqlaslqv pycpsgaitp rplrtqprqg
       61 hfqdlhlltr mnlllswqlm lllcatsfme tlekvvpmen prttgsqlgp atlqapweqs
      121 prcaaekpaa agprprgaal cppdssagpq rpgpcaprsr liqaprgavl vqrekdasay
      181 nwnsfglryg rrqaalpggr gaarg
//
LOCUS       XP_061015846             138 aa            linear   MAM 02-DEC-2023
DEFINITION  vesicle transport protein GOT1A isoform X1 [Dama dama].
ACCESSION   XP_061015846
VERSION     XP_061015846.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159863.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..138
                     /product="vesicle transport protein GOT1A isoform X1"
                     /calculated_mol_wt=15207
     Region          15..117
                     /region_name="Got1"
                     /note="Got1/Sft2-like family; cl02130"
                     /db_xref="CDD:470475"
     CDS             1..138
                     /gene="GOLT1A"
                     /coded_by="XM_061159863.1:1352..1768"
                     /db_xref="GeneID:133068931"
ORIGIN      
        1 mwaepnssfq vlngeigvgt agfgiffilf gtllyfdsvl lafgnllflt glsliiglrr
       61 tfsfffqrhk lkgtsfflgg vavvllrwpl lgmiletygf fslfrgffpv afgflgstcn
      121 ipflsalfrr lqgtssmv
//
LOCUS       XP_061015847             132 aa            linear   MAM 02-DEC-2023
DEFINITION  vesicle transport protein GOT1A isoform X2 [Dama dama].
ACCESSION   XP_061015847
VERSION     XP_061015847.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159864.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..132
                     /product="vesicle transport protein GOT1A isoform X2"
                     /calculated_mol_wt=14634
     Region          4..111
                     /region_name="Got1"
                     /note="Got1/Sft2-like family; cl02130"
                     /db_xref="CDD:470475"
     CDS             1..132
                     /gene="GOLT1A"
                     /coded_by="XM_061159864.1:118..516"
                     /db_xref="GeneID:133068931"
ORIGIN      
        1 misitewqki gvgtagfgif filfgtllyf dsvllafgnl lfltglslii glrrtfsfff
       61 qrhklkgtsf flggvavvll rwpllgmile tygffslfrg ffpvafgflg stcnipflsa
      121 lfrrlqgtss mv
//
LOCUS       XP_061015848            1296 aa            linear   MAM 02-DEC-2023
DEFINITION  pleckstrin homology domain-containing family A member 6 isoform X1
            [Dama dama].
ACCESSION   XP_061015848
VERSION     XP_061015848.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159865.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1296
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1296
                     /product="pleckstrin homology domain-containing family A
                     member 6 isoform X1"
                     /calculated_mol_wt=144125
     Region          10..39
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          171..294
                     /region_name="PH_PEPP1_2_3"
                     /note="Phosphoinositol 3-phosphate binding proteins 1, 2,
                     and 3 pleckstrin homology (PH) domain; cd13248"
                     /db_xref="CDD:270068"
     Site            order(185,187..188,195,197,208,271)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:270068"
     Region          <299..702
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          382..>572
                     /region_name="dnaA"
                     /note="chromosomal replication initiator protein DnaA;
                     cl42516"
                     /db_xref="CDD:455861"
     Region          734..>854
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     CDS             1..1296
                     /gene="PLEKHA6"
                     /coded_by="XM_061159865.1:112..4002"
                     /db_xref="GeneID:133068932"
ORIGIN      
        1 madeidwldl pgrwtygvdr ggrvffinde ekstswvhpg taspiqsghs scpglpkgwe
       61 mdstqegavy fikacclrkv akgqwshner rntflhpltg qapeenkkfd lkisaldmsn
      121 kaggrrsttt ssdltnhsmv sevpperpsv raarpsrkai afgkrshsmk rnpsapvtka
      181 gwlfkqassg vkqwnkrwfv lvdrclfyyk dekeesvlgs vpllsfrvaa vqpsdnisrk
      241 htfkvtvcwv deagassthc lspqaehagv rtyffsaesp eeqeawiqam geaarvqipp
      301 aqksappqas rhnhekpdse nippgkhhhq lphnsvpkpe peaktrgegd grgcekverr
      361 perpdrpdak seplakangv lagpepasep gspfpegprv pgggerpaqp ngwqysspsr
      421 pgstafppqd sesgghrrsf ppcanpdkia qrkssmnqlq qwvnlrrgip ppedlrspsr
      481 fypvsrrvpe yyspyssqyp ddyqyyppgv rpdsicsmpa ydrisppwal edkrhsfrng
      541 ggpafqlrew kepagygrpd gtvwipspsr qpvyydelea asgslrrlsl qprshsvprs
      601 pgqgsygrgr vysparspra hferlpprse diytdpaayv mrrsisspky dylgdrrpvp
      661 aglfpynypp sptvrdkmms esealisvvn rmvessspsa qlfmqvppyp evfqdslhay
      721 klneqgtdkl lgklceqnka vreqerlvqq lraekesles almgthqele mfgsqpaype
      781 kllhkkeslq nqlinirvel sqattalans sleyenleae vsalhdelwe qlsldlqnev
      841 lnrqiqkeiw riqdvmeglr knnpsrgtdt akhrgglgps gtyssnspas plssasltsp
      901 lspfslvsgs qgsptkpgfs eepgpprppl pkayvplesp ptvpplpses rfwphpnsps
      961 whrggetarg qpkanyeqsk rdpqqtspld tsrdislvst rqeveaekqa alnkvgivpp
     1021 rtksptdeev tpsrvvrrsa ngltnglssr qerpksavfp gegkakmsve eqmdrmrrrq
     1081 sgsardkrrs lqlpsspapd paarpaykvv rrhrsihevd isnleaalra eepggqayet
     1141 preeiarlrk melepqhydv dinkelstpd kvliperyid lepdmplspe elkekqkkve
     1201 riktliakss mqnvvpvgeg dfvdvpqdse sqlqeqekri eiscalatea srrgrmlsvq
     1261 catpspptsp aspappanpl psepprgtds shvmrv
//
LOCUS       XP_061015849            1295 aa            linear   MAM 02-DEC-2023
DEFINITION  pleckstrin homology domain-containing family A member 6 isoform X2
            [Dama dama].
ACCESSION   XP_061015849
VERSION     XP_061015849.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159866.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1295
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1295
                     /product="pleckstrin homology domain-containing family A
                     member 6 isoform X2"
                     /calculated_mol_wt=143997
     Region          10..39
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          171..294
                     /region_name="PH_PEPP1_2_3"
                     /note="Phosphoinositol 3-phosphate binding proteins 1, 2,
                     and 3 pleckstrin homology (PH) domain; cd13248"
                     /db_xref="CDD:270068"
     Site            order(185,187..188,195,197,208,271)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:270068"
     Region          <299..702
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          382..>572
                     /region_name="dnaA"
                     /note="chromosomal replication initiator protein DnaA;
                     cl42516"
                     /db_xref="CDD:455861"
     Region          734..>854
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     CDS             1..1295
                     /gene="PLEKHA6"
                     /coded_by="XM_061159866.1:112..3999"
                     /db_xref="GeneID:133068932"
ORIGIN      
        1 madeidwldl pgrwtygvdr ggrvffinde ekstswvhpg taspiqsghs scpglpkgwe
       61 mdstqegavy fikacclrkv akgqwshner rntflhpltg qapeenkkfd lkisaldmsn
      121 kaggrrsttt ssdltnhsmv sevpperpsv raarpsrkai afgkrshsmk rnpsapvtka
      181 gwlfkqassg vkqwnkrwfv lvdrclfyyk dekeesvlgs vpllsfrvaa vqpsdnisrk
      241 htfkvtvcwv deagassthc lspqaehagv rtyffsaesp eeqeawiqam geaarvqipp
      301 aqksappqas rhnhekpdse nippgkhhhq lphnsvpkpe peaktrgegd grgcekverr
      361 perpdrpdak seplakangv lagpepasep gspfpegprv pgggerpaqp ngwqysspsr
      421 pgstafppqd sesgghrrsf ppcanpdkia qrkssmnqlq qwvnlrrgip ppedlrspsr
      481 fypvsrrvpe yyspyssqyp ddyqyyppgv rpdsicsmpa ydrisppwal edkrhsfrng
      541 ggpafqlrew kepagygrpd gtvwipspsr qpvyydelea asgslrrlsl qprshsvprs
      601 pgqgsygrgr vysparspra hferlpprse diytdpaayv mrrsisspky dylgdrrpvp
      661 aglfpynypp sptvrdkmms esealisvvn rmvessspsa qlfmqvppyp evfqdslhay
      721 klneqgtdkl lgklceqnka vreqerlvqq lraekesles almgthqele mfgsqpaype
      781 kllhkkeslq nqlinirvel sqattalans sleyenleae vsalhdelwe qlsldlqnev
      841 lnrqiqkeiw riqdvmeglr knnpsrgtdt akhrgglgps gtyssnspas plssasltsp
      901 lspfslvsgs qgsptkpgfs eepgpprppl pkayvplesp ptvpplpses rfwphpnsps
      961 whrggetarg qpkanyeqsk rdpqqtspld tsrdislvst rqeveaekqa alnkvgivpp
     1021 rtksptdeev tpsrvvrrsa ngltnglssr erpksavfpg egkakmsvee qmdrmrrrqs
     1081 gsardkrrsl qlpsspapdp aarpaykvvr rhrsihevdi snleaalrae epggqayetp
     1141 reeiarlrkm elepqhydvd inkelstpdk vliperyidl epdmplspee lkekqkkver
     1201 iktliakssm qnvvpvgegd fvdvpqdses qlqeqekrie iscalateas rrgrmlsvqc
     1261 atpspptspa spappanplp sepprgtdss hvmrv
//
LOCUS       XP_061015850            1283 aa            linear   MAM 02-DEC-2023
DEFINITION  pleckstrin homology domain-containing family A member 6 isoform X3
            [Dama dama].
ACCESSION   XP_061015850
VERSION     XP_061015850.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159867.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1283
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1283
                     /product="pleckstrin homology domain-containing family A
                     member 6 isoform X3"
                     /calculated_mol_wt=142679
     Region          10..39
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          56..84
                     /region_name="WW"
                     /note="Two conserved tryptophans domain; also known as the
                     WWP or rsp5 domain; around 40 amino acids; functions as an
                     interaction module in a diverse set of signalling
                     proteins; binds specific proline-rich sequences but at low
                     affinities compared to other...; cd00201"
                     /db_xref="CDD:238122"
     Site            order(70,81)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          158..281
                     /region_name="PH_PEPP1_2_3"
                     /note="Phosphoinositol 3-phosphate binding proteins 1, 2,
                     and 3 pleckstrin homology (PH) domain; cd13248"
                     /db_xref="CDD:270068"
     Site            order(172,174..175,182,184,195,258)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:270068"
     Region          <286..689
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          369..>559
                     /region_name="dnaA"
                     /note="chromosomal replication initiator protein DnaA;
                     cl42516"
                     /db_xref="CDD:455861"
     Region          721..>841
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     CDS             1..1283
                     /gene="PLEKHA6"
                     /coded_by="XM_061159867.1:111..3962"
                     /db_xref="GeneID:133068932"
ORIGIN      
        1 madeidwldl pgrwtygvdr ggrvffinde ekstswvhpg taspiqsghs scpglpkgwe
       61 mdstqegavy finhnerrnt flhpltgqap eenkkfdlki saldmsnkag grrstttssd
      121 ltnhsmvsev pperpsvraa rpsrkaiafg krshsmkrnp sapvtkagwl fkqassgvkq
      181 wnkrwfvlvd rclfyykdek eesvlgsvpl lsfrvaavqp sdnisrkhtf kvtvcwvdea
      241 gassthclsp qaehagvrty ffsaespeeq eawiqamgea arvqippaqk sappqasrhn
      301 hekpdsenip pgkhhhqlph nsvpkpepea ktrgegdgrg cekverrper pdrpdaksep
      361 lakangvlag pepasepgsp fpegprvpgg gerpaqpngw qysspsrpgs tafppqdses
      421 gghrrsfppc anpdkiaqrk ssmnqlqqwv nlrrgipppe dlrspsrfyp vsrrvpeyys
      481 pyssqypddy qyyppgvrpd sicsmpaydr isppwaledk rhsfrngggp afqlrewkep
      541 agygrpdgtv wipspsrqpv yydeleaasg slrrlslqpr shsvprspgq gsygrgrvys
      601 parsprahfe rlpprsediy tdpaayvmrr sisspkydyl gdrrpvpagl fpynyppspt
      661 vrdkmmsese alisvvnrmv essspsaqlf mqvppypevf qdslhaykln eqgtdkllgk
      721 lceqnkavre qerlvqqlra ekeslesalm gthqelemfg sqpaypekll hkkeslqnql
      781 inirvelsqa ttalanssle yenleaevsa lhdelweqls ldlqnevlnr qiqkeiwriq
      841 dvmeglrknn psrgtdtakh rgglgpsgty ssnspaspls sasltsplsp fslvsgsqgs
      901 ptkpgfseep gpprpplpka yvplespptv pplpsesrfw phpnspswhr ggetargqpk
      961 anyeqskrdp qqtspldtsr dislvstrqe veaekqaaln kvgivpprtk sptdeevtps
     1021 rvvrrsangl tnglssrqer pksavfpgeg kakmsveeqm drmrrrqsgs ardkrrslql
     1081 psspapdpaa rpaykvvrrh rsihevdisn leaalraeep ggqayetpre eiarlrkmel
     1141 epqhydvdin kelstpdkvl iperyidlep dmplspeelk ekqkkverik tliakssmqn
     1201 vvpvgegdfv dvpqdsesql qeqekrieis calateasrr grmlsvqcat pspptspasp
     1261 appanplpse pprgtdsshv mrv
//
LOCUS       XP_061015851            1276 aa            linear   MAM 02-DEC-2023
DEFINITION  pleckstrin homology domain-containing family A member 6 isoform X4
            [Dama dama].
ACCESSION   XP_061015851
VERSION     XP_061015851.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159868.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1276
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1276
                     /product="pleckstrin homology domain-containing family A
                     member 6 isoform X4"
                     /calculated_mol_wt=142053
     Region          10..39
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          171..274
                     /region_name="PH_PEPP1_2_3"
                     /note="Phosphoinositol 3-phosphate binding proteins 1, 2,
                     and 3 pleckstrin homology (PH) domain; cd13248"
                     /db_xref="CDD:270068"
     Site            order(185,187..188,195,197,208,251)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:270068"
     Region          <279..682
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          362..>552
                     /region_name="dnaA"
                     /note="chromosomal replication initiator protein DnaA;
                     cl42516"
                     /db_xref="CDD:455861"
     Region          714..>834
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     CDS             1..1276
                     /gene="PLEKHA6"
                     /coded_by="XM_061159868.1:112..3942"
                     /db_xref="GeneID:133068932"
ORIGIN      
        1 madeidwldl pgrwtygvdr ggrvffinde ekstswvhpg taspiqsghs scpglpkgwe
       61 mdstqegavy fikacclrkv akgqwshner rntflhpltg qapeenkkfd lkisaldmsn
      121 kaggrrsttt ssdltnhsmv sevpperpsv raarpsrkai afgkrshsmk rnpsapvtka
      181 gwlfkqassg vkqwnkrwfv lvdrclfyyk dekeesvlgs vpllsfrvaa vqpsdnisrk
      241 htfkaehagv rtyffsaesp eeqeawiqam geaarvqipp aqksappqas rhnhekpdse
      301 nippgkhhhq lphnsvpkpe peaktrgegd grgcekverr perpdrpdak seplakangv
      361 lagpepasep gspfpegprv pgggerpaqp ngwqysspsr pgstafppqd sesgghrrsf
      421 ppcanpdkia qrkssmnqlq qwvnlrrgip ppedlrspsr fypvsrrvpe yyspyssqyp
      481 ddyqyyppgv rpdsicsmpa ydrisppwal edkrhsfrng ggpafqlrew kepagygrpd
      541 gtvwipspsr qpvyydelea asgslrrlsl qprshsvprs pgqgsygrgr vysparspra
      601 hferlpprse diytdpaayv mrrsisspky dylgdrrpvp aglfpynypp sptvrdkmms
      661 esealisvvn rmvessspsa qlfmqvppyp evfqdslhay klneqgtdkl lgklceqnka
      721 vreqerlvqq lraekesles almgthqele mfgsqpaype kllhkkeslq nqlinirvel
      781 sqattalans sleyenleae vsalhdelwe qlsldlqnev lnrqiqkeiw riqdvmeglr
      841 knnpsrgtdt akhrgglgps gtyssnspas plssasltsp lspfslvsgs qgsptkpgfs
      901 eepgpprppl pkayvplesp ptvpplpses rfwphpnsps whrggetarg qpkanyeqsk
      961 rdpqqtspld tsrdislvst rqeveaekqa alnkvgivpp rtksptdeev tpsrvvrrsa
     1021 ngltnglssr qerpksavfp gegkakmsve eqmdrmrrrq sgsardkrrs lqlpsspapd
     1081 paarpaykvv rrhrsihevd isnleaalra eepggqayet preeiarlrk melepqhydv
     1141 dinkelstpd kvliperyid lepdmplspe elkekqkkve riktliakss mqnvvpvgeg
     1201 dfvdvpqdse sqlqeqekri eiscalatea srrgrmlsvq catpspptsp aspappanpl
     1261 psepprgtds shvmrv
//
LOCUS       XP_061015852            1275 aa            linear   MAM 02-DEC-2023
DEFINITION  pleckstrin homology domain-containing family A member 6 isoform X5
            [Dama dama].
ACCESSION   XP_061015852
VERSION     XP_061015852.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159869.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1275
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1275
                     /product="pleckstrin homology domain-containing family A
                     member 6 isoform X5"
                     /calculated_mol_wt=142121
     Region          10..39
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          171..294
                     /region_name="PH_PEPP1_2_3"
                     /note="Phosphoinositol 3-phosphate binding proteins 1, 2,
                     and 3 pleckstrin homology (PH) domain; cd13248"
                     /db_xref="CDD:270068"
     Site            order(185,187..188,195,197,208,271)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:270068"
     Region          <299..702
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          382..>572
                     /region_name="dnaA"
                     /note="chromosomal replication initiator protein DnaA;
                     cl42516"
                     /db_xref="CDD:455861"
     Region          734..>854
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     CDS             1..1275
                     /gene="PLEKHA6"
                     /coded_by="XM_061159869.1:112..3939"
                     /db_xref="GeneID:133068932"
ORIGIN      
        1 madeidwldl pgrwtygvdr ggrvffinde ekstswvhpg taspiqsghs scpglpkgwe
       61 mdstqegavy fikacclrkv akgqwshner rntflhpltg qapeenkkfd lkisaldmsn
      121 kaggrrsttt ssdltnhsmv sevpperpsv raarpsrkai afgkrshsmk rnpsapvtka
      181 gwlfkqassg vkqwnkrwfv lvdrclfyyk dekeesvlgs vpllsfrvaa vqpsdnisrk
      241 htfkvtvcwv deagassthc lspqaehagv rtyffsaesp eeqeawiqam geaarvqipp
      301 aqksappqas rhnhekpdse nippgkhhhq lphnsvpkpe peaktrgegd grgcekverr
      361 perpdrpdak seplakangv lagpepasep gspfpegprv pgggerpaqp ngwqysspsr
      421 pgstafppqd sesgghrrsf ppcanpdkia qrkssmnqlq qwvnlrrgip ppedlrspsr
      481 fypvsrrvpe yyspyssqyp ddyqyyppgv rpdsicsmpa ydrisppwal edkrhsfrng
      541 ggpafqlrew kepagygrpd gtvwipspsr qpvyydelea asgslrrlsl qprshsvprs
      601 pgqgsygrgr vysparspra hferlpprse diytdpaayv mrrsisspky dylgdrrpvp
      661 aglfpynypp sptvrdkmms esealisvvn rmvessspsa qlfmqvppyp evfqdslhay
      721 klneqgtdkl lgklceqnka vreqerlvqq lraekesles almgthqele mfgsqpaype
      781 kllhkkeslq nqlinirvel sqattalans sleyenleae vsalhdelwe qlsldlqnev
      841 lnrqiqkeiw riqdvmeglr knnpsrgtdt akhrgglgps gtyssnspas plssasltsp
      901 lspfslvsgs qgsptkpgfs eepgpprppl pkayvplesp ptvpplpses rfwphpnsps
      961 whrggetarg qpkanyeqsk rdpqqtspld tsrdislvst rqeveaekqa alnkvgivpp
     1021 rtksptdeev tpsrvvrrsa ngltnglssr qerpksavfp gegkakmsve eqmdrmrrrq
     1081 sgsardkrrs lqlpsspapd paarpaykvv rrhrsihevd isnleaalra eepggqayet
     1141 preeiarlrk melepqhydv dinkelstpd kvliperyid lepdmplspe elkekqkkve
     1201 riktliakss mqnvvpvgeg dfvdvpqdse sqlqeqekri eiscalatea srrgrmlsvq
     1261 alaeanavkl qratf
//
LOCUS       XP_061015853            1269 aa            linear   MAM 02-DEC-2023
DEFINITION  pleckstrin homology domain-containing family A member 6 isoform X6
            [Dama dama].
ACCESSION   XP_061015853
VERSION     XP_061015853.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159870.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1269
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1269
                     /product="pleckstrin homology domain-containing family A
                     member 6 isoform X6"
                     /calculated_mol_wt=141185
     Region          10..39
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          171..294
                     /region_name="PH_PEPP1_2_3"
                     /note="Phosphoinositol 3-phosphate binding proteins 1, 2,
                     and 3 pleckstrin homology (PH) domain; cd13248"
                     /db_xref="CDD:270068"
     Site            order(185,187..188,195,197,208,271)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:270068"
     Region          382..>572
                     /region_name="dnaA"
                     /note="chromosomal replication initiator protein DnaA;
                     cl42516"
                     /db_xref="CDD:455861"
     Region          707..>827
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     CDS             1..1269
                     /gene="PLEKHA6"
                     /coded_by="XM_061159870.1:111..3920"
                     /db_xref="GeneID:133068932"
ORIGIN      
        1 madeidwldl pgrwtygvdr ggrvffinde ekstswvhpg taspiqsghs scpglpkgwe
       61 mdstqegavy fikacclrkv akgqwshner rntflhpltg qapeenkkfd lkisaldmsn
      121 kaggrrsttt ssdltnhsmv sevpperpsv raarpsrkai afgkrshsmk rnpsapvtka
      181 gwlfkqassg vkqwnkrwfv lvdrclfyyk dekeesvlgs vpllsfrvaa vqpsdnisrk
      241 htfkvtvcwv deagassthc lspqaehagv rtyffsaesp eeqeawiqam geaarvqipp
      301 aqksappqas rhnhekpdse nippgkhhhq lphnsvpkpe peaktrgegd grgcekverr
      361 perpdrpdak seplakangv lagpepasep gspfpegprv pgggerpaqp ngwqysspsr
      421 pgstafppqd sesgghrrsf ppcanpdkia qrkssmnqlq qwvnlrrgip ppedlrspsr
      481 fypvsrrvpe yyspyssqyp ddyqyyppgv rpdsicsmpa ydrisppwal edkrhsfrng
      541 ggpafqlrew kepagygrpd gtvwipspsr qpvyydelea asgslrrlsl qprshsvprs
      601 pgqgsygrgr vysparspra hferlpprse diytdpaayv mrrsisspky dylgdrrpvp
      661 aglfpynypp sptvrdkmvp pypevfqdsl hayklneqgt dkllgklceq nkavreqerl
      721 vqqlraekes lesalmgthq elemfgsqpa ypekllhkke slqnqlinir velsqattal
      781 anssleyenl eaevsalhde lweqlsldlq nevlnrqiqk eiwriqdvme glrknnpsrg
      841 tdtakhrggl gpsgtyssns pasplssasl tsplspfslv sgsqgsptkp gfseepgppr
      901 pplpkayvpl espptvpplp sesrfwphpn spswhrgget argqpkanye qskrdpqqts
      961 pldtsrdisl vstrqeveae kqaalnkvgi vpprtksptd eevtpsrvvr rsangltngl
     1021 ssrqerpksa vfpgegkakm sveeqmdrmr rrqsgsardk rrslqlpssp apdpaarpay
     1081 kvvrrhrsih evdisnleaa lraeepggqa yetpreeiar lrkmelepqh ydvdinkels
     1141 tpdkvliper yidlepdmpl speelkekqk kveriktlia kssmqnvvpv gegdfvdvpq
     1201 dsesqlqeqe krieiscala teasrrgrml svqcatpspp tspaspappa nplpsepprg
     1261 tdsshvmrv
//
LOCUS       XP_061015854            1246 aa            linear   MAM 02-DEC-2023
DEFINITION  pleckstrin homology domain-containing family A member 6 isoform X7
            [Dama dama].
ACCESSION   XP_061015854
VERSION     XP_061015854.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159871.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1246
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1246
                     /product="pleckstrin homology domain-containing family A
                     member 6 isoform X7"
                     /calculated_mol_wt=138654
     Region          10..39
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          171..294
                     /region_name="PH_PEPP1_2_3"
                     /note="Phosphoinositol 3-phosphate binding proteins 1, 2,
                     and 3 pleckstrin homology (PH) domain; cd13248"
                     /db_xref="CDD:270068"
     Site            order(185,187..188,195,197,208,271)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:270068"
     Region          <299..702
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          382..>572
                     /region_name="dnaA"
                     /note="chromosomal replication initiator protein DnaA;
                     cl42516"
                     /db_xref="CDD:455861"
     Region          734..>854
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     CDS             1..1246
                     /gene="PLEKHA6"
                     /coded_by="XM_061159871.1:110..3850"
                     /db_xref="GeneID:133068932"
ORIGIN      
        1 madeidwldl pgrwtygvdr ggrvffinde ekstswvhpg taspiqsghs scpglpkgwe
       61 mdstqegavy fikacclrkv akgqwshner rntflhpltg qapeenkkfd lkisaldmsn
      121 kaggrrsttt ssdltnhsmv sevpperpsv raarpsrkai afgkrshsmk rnpsapvtka
      181 gwlfkqassg vkqwnkrwfv lvdrclfyyk dekeesvlgs vpllsfrvaa vqpsdnisrk
      241 htfkvtvcwv deagassthc lspqaehagv rtyffsaesp eeqeawiqam geaarvqipp
      301 aqksappqas rhnhekpdse nippgkhhhq lphnsvpkpe peaktrgegd grgcekverr
      361 perpdrpdak seplakangv lagpepasep gspfpegprv pgggerpaqp ngwqysspsr
      421 pgstafppqd sesgghrrsf ppcanpdkia qrkssmnqlq qwvnlrrgip ppedlrspsr
      481 fypvsrrvpe yyspyssqyp ddyqyyppgv rpdsicsmpa ydrisppwal edkrhsfrng
      541 ggpafqlrew kepagygrpd gtvwipspsr qpvyydelea asgslrrlsl qprshsvprs
      601 pgqgsygrgr vysparspra hferlpprse diytdpaayv mrrsisspky dylgdrrpvp
      661 aglfpynypp sptvrdkmms esealisvvn rmvessspsa qlfmqvppyp evfqdslhay
      721 klneqgtdkl lgklceqnka vreqerlvqq lraekesles almgthqele mfgsqpaype
      781 kllhkkeslq nqlinirvel sqattalans sleyenleae vsalhdelwe qlsldlqnev
      841 lnrqiqkeiw riqdvmeglr knnpsrgtdt akhrgglgps gtyssnspas plssasltsp
      901 lspfslvsgs qgsptkpgfs epkanyeqsk rdpqqtspld tsrdislvst rqeveaekqa
      961 alnkvgivpp rtksptdeev tpsrvvrrsa ngltnglssr qerpksavfp gegkakmsve
     1021 eqmdrmrrrq sgsardkrrs lqlpsspapd paarpaykvv rrhrsihevd isnleaalra
     1081 eepggqayet preeiarlrk melepqhydv dinkelstpd kvliperyid lepdmplspe
     1141 elkekqkkve riktliakss mqnvvpvgeg dfvdvpqdse sqlqeqekri eiscalatea
     1201 srrgrmlsvq catpspptsp aspappanpl psepprgtds shvmrv
//
LOCUS       XP_061015855            1240 aa            linear   MAM 02-DEC-2023
DEFINITION  pleckstrin homology domain-containing family A member 6 isoform X8
            [Dama dama].
ACCESSION   XP_061015855
VERSION     XP_061015855.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159872.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1240
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1240
                     /product="pleckstrin homology domain-containing family A
                     member 6 isoform X8"
                     /calculated_mol_wt=137817
     Region          10..39
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          171..294
                     /region_name="PH_PEPP1_2_3"
                     /note="Phosphoinositol 3-phosphate binding proteins 1, 2,
                     and 3 pleckstrin homology (PH) domain; cd13248"
                     /db_xref="CDD:270068"
     Site            order(185,187..188,195,197,208,271)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:270068"
     Region          382..>572
                     /region_name="dnaA"
                     /note="chromosomal replication initiator protein DnaA;
                     cl42516"
                     /db_xref="CDD:455861"
     Region          678..>798
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     CDS             1..1240
                     /gene="PLEKHA6"
                     /coded_by="XM_061159872.1:111..3833"
                     /db_xref="GeneID:133068932"
ORIGIN      
        1 madeidwldl pgrwtygvdr ggrvffinde ekstswvhpg taspiqsghs scpglpkgwe
       61 mdstqegavy fikacclrkv akgqwshner rntflhpltg qapeenkkfd lkisaldmsn
      121 kaggrrsttt ssdltnhsmv sevpperpsv raarpsrkai afgkrshsmk rnpsapvtka
      181 gwlfkqassg vkqwnkrwfv lvdrclfyyk dekeesvlgs vpllsfrvaa vqpsdnisrk
      241 htfkvtvcwv deagassthc lspqaehagv rtyffsaesp eeqeawiqam geaarvqipp
      301 aqksappqas rhnhekpdse nippgkhhhq lphnsvpkpe peaktrgegd grgcekverr
      361 perpdrpdak seplakangv lagpepasep gspfpegprv pgggerpaqp ngwqysspsr
      421 pgstafppqd sesgghrrsf ppcanpdkia qrkssmnqlq qwvnlrrgip ppedlrspsr
      481 fypvsrrvpe yyspyssqyp ddyqyyppgv rpdsicsmpa ydrisppwal edkrhsfrng
      541 ggpafqlrew kepagygrpd gtvwipspsr qpvyydelea asgslrrlsl qprshsvprs
      601 pgqgsygrgr vysparspra hferlpprse diytdpaayv mrrsisspkv ppypevfqds
      661 lhayklneqg tdkllgklce qnkavreqer lvqqlraeke slesalmgth qelemfgsqp
      721 aypekllhkk eslqnqlini rvelsqatta lanssleyen leaevsalhd elweqlsldl
      781 qnevlnrqiq keiwriqdvm eglrknnpsr gtdtakhrgg lgpsgtyssn spasplssas
      841 ltsplspfsl vsgsqgsptk pgfseepgpp rpplpkayvp lespptvppl psesrfwphp
      901 nspswhrgge targqpkany eqskrdpqqt spldtsrdis lvstrqevea ekqaalnkvg
      961 ivpprtkspt deevtpsrvv rrsangltng lssrqerpks avfpgegkak msveeqmdrm
     1021 rrrqsgsard krrslqlpss papdpaarpa ykvvrrhrsi hevdisnlea alraeepggq
     1081 ayetpreeia rlrkmelepq hydvdinkel stpdkvlipe ryidlepdmp lspeelkekq
     1141 kkveriktli akssmqnvvp vgegdfvdvp qdsesqlqeq ekrieiscal ateasrrgrm
     1201 lsvqcatpsp ptspaspapp anplpseppr gtdsshvmrv
//
LOCUS       XP_061015856            1190 aa            linear   MAM 02-DEC-2023
DEFINITION  pleckstrin homology domain-containing family A member 6 isoform X9
            [Dama dama].
ACCESSION   XP_061015856
VERSION     XP_061015856.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159873.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1190
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1190
                     /product="pleckstrin homology domain-containing family A
                     member 6 isoform X9"
                     /calculated_mol_wt=132346
     Region          10..39
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          171..294
                     /region_name="PH_PEPP1_2_3"
                     /note="Phosphoinositol 3-phosphate binding proteins 1, 2,
                     and 3 pleckstrin homology (PH) domain; cd13248"
                     /db_xref="CDD:270068"
     Site            order(185,187..188,195,197,208,271)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:270068"
     Region          382..>572
                     /region_name="dnaA"
                     /note="chromosomal replication initiator protein DnaA;
                     cl42516"
                     /db_xref="CDD:455861"
     Region          678..>798
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     CDS             1..1190
                     /gene="PLEKHA6"
                     /coded_by="XM_061159873.1:110..3682"
                     /db_xref="GeneID:133068932"
ORIGIN      
        1 madeidwldl pgrwtygvdr ggrvffinde ekstswvhpg taspiqsghs scpglpkgwe
       61 mdstqegavy fikacclrkv akgqwshner rntflhpltg qapeenkkfd lkisaldmsn
      121 kaggrrsttt ssdltnhsmv sevpperpsv raarpsrkai afgkrshsmk rnpsapvtka
      181 gwlfkqassg vkqwnkrwfv lvdrclfyyk dekeesvlgs vpllsfrvaa vqpsdnisrk
      241 htfkvtvcwv deagassthc lspqaehagv rtyffsaesp eeqeawiqam geaarvqipp
      301 aqksappqas rhnhekpdse nippgkhhhq lphnsvpkpe peaktrgegd grgcekverr
      361 perpdrpdak seplakangv lagpepasep gspfpegprv pgggerpaqp ngwqysspsr
      421 pgstafppqd sesgghrrsf ppcanpdkia qrkssmnqlq qwvnlrrgip ppedlrspsr
      481 fypvsrrvpe yyspyssqyp ddyqyyppgv rpdsicsmpa ydrisppwal edkrhsfrng
      541 ggpafqlrew kepagygrpd gtvwipspsr qpvyydelea asgslrrlsl qprshsvprs
      601 pgqgsygrgr vysparspra hferlpprse diytdpaayv mrrsisspkv ppypevfqds
      661 lhayklneqg tdkllgklce qnkavreqer lvqqlraeke slesalmgth qelemfgsqp
      721 aypekllhkk eslqnqlini rvelsqatta lanssleyen leaevsalhd elweqlsldl
      781 qnevlnrqiq keiwriqdvm eglrknnpsr gtdtakhrgg lgpsgtyssn spasplssas
      841 ltsplspfsl vsgsqgsptk pgfsepkany eqskrdpqqt spldtsrdis lvstrqevea
      901 ekqaalnkvg ivpprtkspt deevtpsrvv rrsangltng lssrqerpks avfpgegkak
      961 msveeqmdrm rrrqsgsard krrslqlpss papdpaarpa ykvvrrhrsi hevdisnlea
     1021 alraeepggq ayetpreeia rlrkmelepq hydvdinkel stpdkvlipe ryidlepdmp
     1081 lspeelkekq kkveriktli akssmqnvvp vgegdfvdvp qdsesqlqeq ekrieiscal
     1141 ateasrrgrm lsvqcatpsp ptspaspapp anplpseppr gtdsshvmrv
//
LOCUS       XP_061015857            1179 aa            linear   MAM 02-DEC-2023
DEFINITION  pleckstrin homology domain-containing family A member 6 isoform X10
            [Dama dama].
ACCESSION   XP_061015857
VERSION     XP_061015857.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159874.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1179
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1179
                     /product="pleckstrin homology domain-containing family A
                     member 6 isoform X10"
                     /calculated_mol_wt=130964
     Region          54..177
                     /region_name="PH_PEPP1_2_3"
                     /note="Phosphoinositol 3-phosphate binding proteins 1, 2,
                     and 3 pleckstrin homology (PH) domain; cd13248"
                     /db_xref="CDD:270068"
     Site            order(68,70..71,78,80,91,154)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:270068"
     Region          <182..585
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          265..>455
                     /region_name="dnaA"
                     /note="chromosomal replication initiator protein DnaA;
                     cl42516"
                     /db_xref="CDD:455861"
     Region          617..>737
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     CDS             1..1179
                     /gene="PLEKHA6"
                     /coded_by="XM_061159874.1:228..3767"
                     /db_xref="GeneID:133068932"
ORIGIN      
        1 msnkaggrrs tttssdltnh smvsevpper psvraarpsr kaiafgkrsh smkrnpsapv
       61 tkagwlfkqa ssgvkqwnkr wfvlvdrclf yykdekeesv lgsvpllsfr vaavqpsdni
      121 srkhtfkvtv cwvdeagass thclspqaeh agvrtyffsa espeeqeawi qamgeaarvq
      181 ippaqksapp qasrhnhekp dsenippgkh hhqlphnsvp kpepeaktrg egdgrgcekv
      241 errperpdrp dakseplaka ngvlagpepa sepgspfpeg prvpgggerp aqpngwqyss
      301 psrpgstafp pqdsesgghr rsfppcanpd kiaqrkssmn qlqqwvnlrr gipppedlrs
      361 psrfypvsrr vpeyyspyss qypddyqyyp pgvrpdsics mpaydrispp waledkrhsf
      421 rngggpafql rewkepagyg rpdgtvwips psrqpvyyde leaasgslrr lslqprshsv
      481 prspgqgsyg rgrvyspars prahferlpp rsediytdpa ayvmrrsiss pkydylgdrr
      541 pvpaglfpyn yppsptvrdk mmsesealis vvnrmvesss psaqlfmqvp pypevfqdsl
      601 hayklneqgt dkllgklceq nkavreqerl vqqlraekes lesalmgthq elemfgsqpa
      661 ypekllhkke slqnqlinir velsqattal anssleyenl eaevsalhde lweqlsldlq
      721 nevlnrqiqk eiwriqdvme glrknnpsrg tdtakhrggl gpsgtyssns pasplssasl
      781 tsplspfslv sgsqgsptkp gfseepgppr pplpkayvpl espptvpplp sesrfwphpn
      841 spswhrgget argqpkanye qskrdpqqts pldtsrdisl vstrqeveae kqaalnkvgi
      901 vpprtksptd eevtpsrvvr rsangltngl ssrqerpksa vfpgegkakm sveeqmdrmr
      961 rrqsgsardk rrslqlpssp apdpaarpay kvvrrhrsih evdisnleaa lraeepggqa
     1021 yetpreeiar lrkmelepqh ydvdinkels tpdkvliper yidlepdmpl speelkekqk
     1081 kveriktlia kssmqnvvpv gegdfvdvpq dsesqlqeqe krieiscala teasrrgrml
     1141 svqcatpspp tspaspappa nplpsepprg tdsshvmrv
//
LOCUS       XP_061015859            1179 aa            linear   MAM 02-DEC-2023
DEFINITION  pleckstrin homology domain-containing family A member 6 isoform X10
            [Dama dama].
ACCESSION   XP_061015859
VERSION     XP_061015859.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159876.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1179
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1179
                     /product="pleckstrin homology domain-containing family A
                     member 6 isoform X10"
                     /calculated_mol_wt=130964
     Region          54..177
                     /region_name="PH_PEPP1_2_3"
                     /note="Phosphoinositol 3-phosphate binding proteins 1, 2,
                     and 3 pleckstrin homology (PH) domain; cd13248"
                     /db_xref="CDD:270068"
     Site            order(68,70..71,78,80,91,154)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:270068"
     Region          <182..585
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          265..>455
                     /region_name="dnaA"
                     /note="chromosomal replication initiator protein DnaA;
                     cl42516"
                     /db_xref="CDD:455861"
     Region          617..>737
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     CDS             1..1179
                     /gene="PLEKHA6"
                     /coded_by="XM_061159876.1:244..3783"
                     /db_xref="GeneID:133068932"
ORIGIN      
        1 msnkaggrrs tttssdltnh smvsevpper psvraarpsr kaiafgkrsh smkrnpsapv
       61 tkagwlfkqa ssgvkqwnkr wfvlvdrclf yykdekeesv lgsvpllsfr vaavqpsdni
      121 srkhtfkvtv cwvdeagass thclspqaeh agvrtyffsa espeeqeawi qamgeaarvq
      181 ippaqksapp qasrhnhekp dsenippgkh hhqlphnsvp kpepeaktrg egdgrgcekv
      241 errperpdrp dakseplaka ngvlagpepa sepgspfpeg prvpgggerp aqpngwqyss
      301 psrpgstafp pqdsesgghr rsfppcanpd kiaqrkssmn qlqqwvnlrr gipppedlrs
      361 psrfypvsrr vpeyyspyss qypddyqyyp pgvrpdsics mpaydrispp waledkrhsf
      421 rngggpafql rewkepagyg rpdgtvwips psrqpvyyde leaasgslrr lslqprshsv
      481 prspgqgsyg rgrvyspars prahferlpp rsediytdpa ayvmrrsiss pkydylgdrr
      541 pvpaglfpyn yppsptvrdk mmsesealis vvnrmvesss psaqlfmqvp pypevfqdsl
      601 hayklneqgt dkllgklceq nkavreqerl vqqlraekes lesalmgthq elemfgsqpa
      661 ypekllhkke slqnqlinir velsqattal anssleyenl eaevsalhde lweqlsldlq
      721 nevlnrqiqk eiwriqdvme glrknnpsrg tdtakhrggl gpsgtyssns pasplssasl
      781 tsplspfslv sgsqgsptkp gfseepgppr pplpkayvpl espptvpplp sesrfwphpn
      841 spswhrgget argqpkanye qskrdpqqts pldtsrdisl vstrqeveae kqaalnkvgi
      901 vpprtksptd eevtpsrvvr rsangltngl ssrqerpksa vfpgegkakm sveeqmdrmr
      961 rrqsgsardk rrslqlpssp apdpaarpay kvvrrhrsih evdisnleaa lraeepggqa
     1021 yetpreeiar lrkmelepqh ydvdinkels tpdkvliper yidlepdmpl speelkekqk
     1081 kveriktlia kssmqnvvpv gegdfvdvpq dsesqlqeqe krieiscala teasrrgrml
     1141 svqcatpspp tspaspappa nplpsepprg tdsshvmrv
//
LOCUS       XP_061015860            1179 aa            linear   MAM 02-DEC-2023
DEFINITION  pleckstrin homology domain-containing family A member 6 isoform X10
            [Dama dama].
ACCESSION   XP_061015860
VERSION     XP_061015860.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159877.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1179
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1179
                     /product="pleckstrin homology domain-containing family A
                     member 6 isoform X10"
                     /calculated_mol_wt=130964
     Region          54..177
                     /region_name="PH_PEPP1_2_3"
                     /note="Phosphoinositol 3-phosphate binding proteins 1, 2,
                     and 3 pleckstrin homology (PH) domain; cd13248"
                     /db_xref="CDD:270068"
     Site            order(68,70..71,78,80,91,154)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:270068"
     Region          <182..585
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          265..>455
                     /region_name="dnaA"
                     /note="chromosomal replication initiator protein DnaA;
                     cl42516"
                     /db_xref="CDD:455861"
     Region          617..>737
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     CDS             1..1179
                     /gene="PLEKHA6"
                     /coded_by="XM_061159877.1:250..3789"
                     /db_xref="GeneID:133068932"
ORIGIN      
        1 msnkaggrrs tttssdltnh smvsevpper psvraarpsr kaiafgkrsh smkrnpsapv
       61 tkagwlfkqa ssgvkqwnkr wfvlvdrclf yykdekeesv lgsvpllsfr vaavqpsdni
      121 srkhtfkvtv cwvdeagass thclspqaeh agvrtyffsa espeeqeawi qamgeaarvq
      181 ippaqksapp qasrhnhekp dsenippgkh hhqlphnsvp kpepeaktrg egdgrgcekv
      241 errperpdrp dakseplaka ngvlagpepa sepgspfpeg prvpgggerp aqpngwqyss
      301 psrpgstafp pqdsesgghr rsfppcanpd kiaqrkssmn qlqqwvnlrr gipppedlrs
      361 psrfypvsrr vpeyyspyss qypddyqyyp pgvrpdsics mpaydrispp waledkrhsf
      421 rngggpafql rewkepagyg rpdgtvwips psrqpvyyde leaasgslrr lslqprshsv
      481 prspgqgsyg rgrvyspars prahferlpp rsediytdpa ayvmrrsiss pkydylgdrr
      541 pvpaglfpyn yppsptvrdk mmsesealis vvnrmvesss psaqlfmqvp pypevfqdsl
      601 hayklneqgt dkllgklceq nkavreqerl vqqlraekes lesalmgthq elemfgsqpa
      661 ypekllhkke slqnqlinir velsqattal anssleyenl eaevsalhde lweqlsldlq
      721 nevlnrqiqk eiwriqdvme glrknnpsrg tdtakhrggl gpsgtyssns pasplssasl
      781 tsplspfslv sgsqgsptkp gfseepgppr pplpkayvpl espptvpplp sesrfwphpn
      841 spswhrgget argqpkanye qskrdpqqts pldtsrdisl vstrqeveae kqaalnkvgi
      901 vpprtksptd eevtpsrvvr rsangltngl ssrqerpksa vfpgegkakm sveeqmdrmr
      961 rrqsgsardk rrslqlpssp apdpaarpay kvvrrhrsih evdisnleaa lraeepggqa
     1021 yetpreeiar lrkmelepqh ydvdinkels tpdkvliper yidlepdmpl speelkekqk
     1081 kveriktlia kssmqnvvpv gegdfvdvpq dsesqlqeqe krieiscala teasrrgrml
     1141 svqcatpspp tspaspappa nplpsepprg tdsshvmrv
//
LOCUS       XP_061015861            1179 aa            linear   MAM 02-DEC-2023
DEFINITION  pleckstrin homology domain-containing family A member 6 isoform X10
            [Dama dama].
ACCESSION   XP_061015861
VERSION     XP_061015861.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159878.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1179
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1179
                     /product="pleckstrin homology domain-containing family A
                     member 6 isoform X10"
                     /calculated_mol_wt=130964
     Region          54..177
                     /region_name="PH_PEPP1_2_3"
                     /note="Phosphoinositol 3-phosphate binding proteins 1, 2,
                     and 3 pleckstrin homology (PH) domain; cd13248"
                     /db_xref="CDD:270068"
     Site            order(68,70..71,78,80,91,154)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:270068"
     Region          <182..585
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          265..>455
                     /region_name="dnaA"
                     /note="chromosomal replication initiator protein DnaA;
                     cl42516"
                     /db_xref="CDD:455861"
     Region          617..>737
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     CDS             1..1179
                     /gene="PLEKHA6"
                     /coded_by="XM_061159878.1:120..3659"
                     /db_xref="GeneID:133068932"
ORIGIN      
        1 msnkaggrrs tttssdltnh smvsevpper psvraarpsr kaiafgkrsh smkrnpsapv
       61 tkagwlfkqa ssgvkqwnkr wfvlvdrclf yykdekeesv lgsvpllsfr vaavqpsdni
      121 srkhtfkvtv cwvdeagass thclspqaeh agvrtyffsa espeeqeawi qamgeaarvq
      181 ippaqksapp qasrhnhekp dsenippgkh hhqlphnsvp kpepeaktrg egdgrgcekv
      241 errperpdrp dakseplaka ngvlagpepa sepgspfpeg prvpgggerp aqpngwqyss
      301 psrpgstafp pqdsesgghr rsfppcanpd kiaqrkssmn qlqqwvnlrr gipppedlrs
      361 psrfypvsrr vpeyyspyss qypddyqyyp pgvrpdsics mpaydrispp waledkrhsf
      421 rngggpafql rewkepagyg rpdgtvwips psrqpvyyde leaasgslrr lslqprshsv
      481 prspgqgsyg rgrvyspars prahferlpp rsediytdpa ayvmrrsiss pkydylgdrr
      541 pvpaglfpyn yppsptvrdk mmsesealis vvnrmvesss psaqlfmqvp pypevfqdsl
      601 hayklneqgt dkllgklceq nkavreqerl vqqlraekes lesalmgthq elemfgsqpa
      661 ypekllhkke slqnqlinir velsqattal anssleyenl eaevsalhde lweqlsldlq
      721 nevlnrqiqk eiwriqdvme glrknnpsrg tdtakhrggl gpsgtyssns pasplssasl
      781 tsplspfslv sgsqgsptkp gfseepgppr pplpkayvpl espptvpplp sesrfwphpn
      841 spswhrgget argqpkanye qskrdpqqts pldtsrdisl vstrqeveae kqaalnkvgi
      901 vpprtksptd eevtpsrvvr rsangltngl ssrqerpksa vfpgegkakm sveeqmdrmr
      961 rrqsgsardk rrslqlpssp apdpaarpay kvvrrhrsih evdisnleaa lraeepggqa
     1021 yetpreeiar lrkmelepqh ydvdinkels tpdkvliper yidlepdmpl speelkekqk
     1081 kveriktlia kssmqnvvpv gegdfvdvpq dsesqlqeqe krieiscala teasrrgrml
     1141 svqcatpspp tspaspappa nplpsepprg tdsshvmrv
//
LOCUS       XP_061015862            1179 aa            linear   MAM 02-DEC-2023
DEFINITION  pleckstrin homology domain-containing family A member 6 isoform X10
            [Dama dama].
ACCESSION   XP_061015862
VERSION     XP_061015862.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159879.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1179
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1179
                     /product="pleckstrin homology domain-containing family A
                     member 6 isoform X10"
                     /calculated_mol_wt=130964
     Region          54..177
                     /region_name="PH_PEPP1_2_3"
                     /note="Phosphoinositol 3-phosphate binding proteins 1, 2,
                     and 3 pleckstrin homology (PH) domain; cd13248"
                     /db_xref="CDD:270068"
     Site            order(68,70..71,78,80,91,154)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:270068"
     Region          <182..585
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          265..>455
                     /region_name="dnaA"
                     /note="chromosomal replication initiator protein DnaA;
                     cl42516"
                     /db_xref="CDD:455861"
     Region          617..>737
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     CDS             1..1179
                     /gene="PLEKHA6"
                     /coded_by="XM_061159879.1:116..3655"
                     /db_xref="GeneID:133068932"
ORIGIN      
        1 msnkaggrrs tttssdltnh smvsevpper psvraarpsr kaiafgkrsh smkrnpsapv
       61 tkagwlfkqa ssgvkqwnkr wfvlvdrclf yykdekeesv lgsvpllsfr vaavqpsdni
      121 srkhtfkvtv cwvdeagass thclspqaeh agvrtyffsa espeeqeawi qamgeaarvq
      181 ippaqksapp qasrhnhekp dsenippgkh hhqlphnsvp kpepeaktrg egdgrgcekv
      241 errperpdrp dakseplaka ngvlagpepa sepgspfpeg prvpgggerp aqpngwqyss
      301 psrpgstafp pqdsesgghr rsfppcanpd kiaqrkssmn qlqqwvnlrr gipppedlrs
      361 psrfypvsrr vpeyyspyss qypddyqyyp pgvrpdsics mpaydrispp waledkrhsf
      421 rngggpafql rewkepagyg rpdgtvwips psrqpvyyde leaasgslrr lslqprshsv
      481 prspgqgsyg rgrvyspars prahferlpp rsediytdpa ayvmrrsiss pkydylgdrr
      541 pvpaglfpyn yppsptvrdk mmsesealis vvnrmvesss psaqlfmqvp pypevfqdsl
      601 hayklneqgt dkllgklceq nkavreqerl vqqlraekes lesalmgthq elemfgsqpa
      661 ypekllhkke slqnqlinir velsqattal anssleyenl eaevsalhde lweqlsldlq
      721 nevlnrqiqk eiwriqdvme glrknnpsrg tdtakhrggl gpsgtyssns pasplssasl
      781 tsplspfslv sgsqgsptkp gfseepgppr pplpkayvpl espptvpplp sesrfwphpn
      841 spswhrgget argqpkanye qskrdpqqts pldtsrdisl vstrqeveae kqaalnkvgi
      901 vpprtksptd eevtpsrvvr rsangltngl ssrqerpksa vfpgegkakm sveeqmdrmr
      961 rrqsgsardk rrslqlpssp apdpaarpay kvvrrhrsih evdisnleaa lraeepggqa
     1021 yetpreeiar lrkmelepqh ydvdinkels tpdkvliper yidlepdmpl speelkekqk
     1081 kveriktlia kssmqnvvpv gegdfvdvpq dsesqlqeqe krieiscala teasrrgrml
     1141 svqcatpspp tspaspappa nplpsepprg tdsshvmrv
//
LOCUS       XP_061015863            1169 aa            linear   MAM 02-DEC-2023
DEFINITION  pleckstrin homology domain-containing family A member 6 isoform X11
            [Dama dama].
ACCESSION   XP_061015863
VERSION     XP_061015863.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159880.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1169
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1169
                     /product="pleckstrin homology domain-containing family A
                     member 6 isoform X11"
                     /calculated_mol_wt=130145
     Region          10..39
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          171..274
                     /region_name="PH_PEPP1_2_3"
                     /note="Phosphoinositol 3-phosphate binding proteins 1, 2,
                     and 3 pleckstrin homology (PH) domain; cd13248"
                     /db_xref="CDD:270068"
     Site            order(185,187..188,195,197,208,251)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:270068"
     Region          362..>552
                     /region_name="dnaA"
                     /note="chromosomal replication initiator protein DnaA;
                     cl42516"
                     /db_xref="CDD:455861"
     Region          658..>778
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     CDS             1..1169
                     /gene="PLEKHA6"
                     /coded_by="XM_061159880.1:111..3620"
                     /db_xref="GeneID:133068932"
ORIGIN      
        1 madeidwldl pgrwtygvdr ggrvffinde ekstswvhpg taspiqsghs scpglpkgwe
       61 mdstqegavy fikacclrkv akgqwshner rntflhpltg qapeenkkfd lkisaldmsn
      121 kaggrrsttt ssdltnhsmv sevpperpsv raarpsrkai afgkrshsmk rnpsapvtka
      181 gwlfkqassg vkqwnkrwfv lvdrclfyyk dekeesvlgs vpllsfrvaa vqpsdnisrk
      241 htfkaehagv rtyffsaesp eeqeawiqam geaarvqipp aqksappqas rhnhekpdse
      301 nippgkhhhq lphnsvpkpe peaktrgegd grgcekverr perpdrpdak seplakangv
      361 lagpepasep gspfpegprv pgggerpaqp ngwqysspsr pgstafppqd sesgghrrsf
      421 ppcanpdkia qrkssmnqlq qwvnlrrgip ppedlrspsr fypvsrrvpe yyspyssqyp
      481 ddyqyyppgv rpdsicsmpa ydrisppwal edkrhsfrng ggpafqlrew kepagygrpd
      541 gtvwipspsr qpvyydelea asgslrrlsl qprshsvprs pgqgsygrgr vysparspra
      601 hferlpprse diytdpaayv mrrsisspkv ppypevfqds lhayklneqg tdkllgklce
      661 qnkavreqer lvqqlraeke slesalmgth qelemfgsqp aypekllhkk eslqnqlini
      721 rvelsqatta lanssleyen leaevsalhd elweqlsldl qnevlnrqiq keiwriqdvm
      781 eglrknnpsr gtdtakhrgg lgpsgtyssn spasplssas ltsplspfsl vsgsqgsptk
      841 pgfsepkany eqskrdpqqt spldtsrdis lvstrqevea ekqaalnkvg ivpprtkspt
      901 deevtpsrvv rrsangltng lssrerpksa vfpgegkakm sveeqmdrmr rrqsgsardk
      961 rrslqlpssp apdpaarpay kvvrrhrsih evdisnleaa lraeepggqa yetpreeiar
     1021 lrkmelepqh ydvdinkels tpdkvliper yidlepdmpl speelkekqk kveriktlia
     1081 kssmqnvvpv gegdfvdvpq dsesqlqeqe krieiscala teasrrgrml svqcatpspp
     1141 tspaspappa nplpsepprg tdsshvmrv
//
LOCUS       XP_061015864             707 aa            linear   MAM 02-DEC-2023
DEFINITION  protein phosphatase 1 regulatory subunit 15B isoform X1 [Dama
            dama].
ACCESSION   XP_061015864
VERSION     XP_061015864.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159881.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..707
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..707
                     /product="protein phosphatase 1 regulatory subunit 15B
                     isoform X1"
                     /calculated_mol_wt=77985
     Region          9..397
                     /region_name="CReP_N"
                     /note="eIF2-alpha phosphatase phosphorylation constitutive
                     repressor; pfam10472"
                     /db_xref="CDD:371074"
     Region          410..693
                     /region_name="PP1c_bdg"
                     /note="Phosphatase-1 catalytic subunit binding region;
                     pfam10488"
                     /db_xref="CDD:431311"
     CDS             1..707
                     /gene="PPP1R15B"
                     /coded_by="XM_061159881.1:453..2576"
                     /db_xref="GeneID:133068935"
ORIGIN      
        1 mrdcrqqeme paadgsrepd prfrlpsffp rlsrpgtsrf paplapepdp rlapspppea
       61 rssswiqlls qllaplpgll qkllvwsqlf ggmiptrwld faggygllra reepaapsap
      121 kalssmrldp sadsaagpld wlegglrwqc sppdlelelk akggasdpaa haflleqplw
      181 gvelvprsvq aslfsdpelg pspcgplnvq rlsnvsvvsy llnpsyldcl prvelsyqss
      241 vgscelvdfq alspesgyld eapsypqpln aemapaswqg cpplsreglp eihhlrmkrl
      301 eflqqaskgq alptpdqdhg yhsleeehsl lrmepkhfgd sstqcvpaag avpgtaqept
      361 eektellire vpfglerqgl sggipscetg qelgedqisv vdssdidddl pistrpacsn
      421 klidyilgga asdletssds ededwgedve ddgfdsdssf sesdleqdse glhlwnsfys
      481 vdpynpqnft atirtaakil pgnpsdsekd lsdksdlgns pqtgslpesp dhnsgddddw
      541 essadeaesl klwnsfcnsd dpynllnfka pfqtagknwk scldserpse pisechtlls
      601 ckgqllgsqe skcpdlvqdv flsgerhthi rrkkvtflee vteyyisgde drkgpweefa
      661 rdgcrfqkri qeteeaigyc ltfehrekmf nrlqqtcfkg lnvfeqh
//
LOCUS       XP_061015865             287 aa            linear   MAM 02-DEC-2023
DEFINITION  protein phosphatase 1 regulatory subunit 15B isoform X2 [Dama
            dama].
ACCESSION   XP_061015865
VERSION     XP_061015865.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159882.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..287
                     /product="protein phosphatase 1 regulatory subunit 15B
                     isoform X2"
                     /calculated_mol_wt=31937
     Region          9..>215
                     /region_name="CReP_N"
                     /note="eIF2-alpha phosphatase phosphorylation constitutive
                     repressor; pfam10472"
                     /db_xref="CDD:371074"
     Region          <211..273
                     /region_name="PP1c_bdg"
                     /note="Phosphatase-1 catalytic subunit binding region;
                     pfam10488"
                     /db_xref="CDD:431311"
     CDS             1..287
                     /gene="PPP1R15B"
                     /coded_by="XM_061159882.1:469..1332"
                     /db_xref="GeneID:133068935"
ORIGIN      
        1 mrdcrqqeme paadgsrepd prfrlpsffp rlsrpgtsrf paplapepdp rlapspppea
       61 rssswiqlls qllaplpgll qkllvwsqlf ggmiptrwld faggygllra reepaapsap
      121 kalssmrldp sadsaagpld wlegglrwqc sppdlelelk akggasdpaa haflleqplw
      181 gvelvprsvq aslfsdpelg pspcgplnvq rlsnvtflee vteyyisgde drkgpweefa
      241 rdgcrfqkri qeteeaigyc ltfehrekmf nrlqqtcfkg lnvfeqh
//
LOCUS       XP_061015866            1634 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing
            subunit beta isoform X1 [Dama dama].
ACCESSION   XP_061015866
VERSION     XP_061015866.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159883.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1634
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1634
                     /product="phosphatidylinositol 4-phosphate 3-kinase C2
                     domain-containing subunit beta isoform X1"
                     /calculated_mol_wt=184436
     Region          364..466
                     /region_name="PI3K_rbd"
                     /note="PI3-kinase family, ras-binding domain; pfam00794"
                     /db_xref="CDD:395642"
     Region          622..794
                     /region_name="C2A_PI3K_class_II"
                     /note="C2 domain first repeat present in class II
                     phosphatidylinositol 3-kinases (PI3Ks); cd04012"
                     /db_xref="CDD:175979"
     Region          813..981
                     /region_name="PI3Ka_II"
                     /note="Phosphoinositide 3-kinase (PI3K) class II,
                     accessory domain (PIK domain); PIK domain is conserved in
                     all PI3 and PI4-kinases. Its role is unclear but it has
                     been suggested to be involved in substrate presentation.
                     In general, class II PI3-kinases...; cd00869"
                     /db_xref="CDD:238441"
     Region          987..1340
                     /region_name="PI3Kc_C2_beta"
                     /note="Catalytic domain of Class II Phosphoinositide
                     3-kinase beta; cd00895"
                     /db_xref="CDD:119421"
     Site            order(1057,1059..1061,1063,1081,1083,1086,1117,1129..1132,
                     1137,1140,1200,1202,1212..1213)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:119421"
     Site            1192..1200
                     /site_type="active"
                     /note="catalytic loop [active]"
                     /db_xref="CDD:119421"
     Site            1213..1237
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:119421"
     Region          1369..1477
                     /region_name="PX_PI3K_C2_beta"
                     /note="The phosphoinositide binding Phox Homology Domain
                     of the Beta Isoform of Class II Phosphoinositide
                     3-Kinases; cd07290"
                     /db_xref="CDD:132823"
     Site            order(1405..1407,1431..1432,1446)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132823"
     Region          1505..1627
                     /region_name="C2B_PI3K_class_II"
                     /note="C2 domain second repeat present in class II
                     phosphatidylinositol 3-kinases (PI3Ks); cd08381"
                     /db_xref="CDD:176027"
     Site            1555..1565
                     /site_type="active"
                     /note="nuclear localization signal [active]"
                     /db_xref="CDD:176027"
     CDS             1..1634
                     /gene="PIK3C2B"
                     /coded_by="XM_061159883.1:399..5303"
                     /db_xref="GeneID:133068936"
ORIGIN      
        1 msstqgsgeh wkslesvgis rkelamaeal qmeydalsrl rhdkeesrak rnadpslisw
       61 depvldfysk pvgrrkdlkl lrglsgsdpt lnynsvspqe glpnhstsqg sqpgpdpwpk
      121 gslaedylyi fdgsdrglsl spgprdredy skklsppplp prvsiwdtpp lpprkgspss
      181 skvsqpsdin tlslveqppg kllgpqilee eeepgggspg rplgsvdydg indaitrlnl
      241 kstydaemlr datrgwkegr gpldfakdtp gkpvarsktm ppqvpprtya sryanrknaa
      301 pgknrrisaa pvgsrphtia nghelfevse erdeevaafc hmldvlrsgs dvrdysltgy
      361 vwsavtpspe hlgdevnlkv tvlcdslrep ltftcncsst vdlliyqtlc ytrdelrdvd
      421 vgdfvlkpcg leeflqnkha lgsheyiqyc rkfdidirlq lmerkavrsd lartanddqs
      481 psslnylvhl qerpvkqtis rqalsllfdt yhnevdafll adgdfplkad rvvqsvkaic
      541 nalaavetpe itsalnqlpp cpsrmkpkiq kdptvlavre nrekvvealt aaildlvely
      601 cntfnadfqt aapgsrkhav vqeachlsgp laftvyathr ipivwatsye efylscslsh
      661 ggkelcsplq trrvhfskyl fhlviwdqqi cfpvqvnrlp retllcatly alpvpppgss
      721 seankqrrvp ealgwvtapl fnfrqvltcg rkllglwpat qespsarwsa pnfhqpdsvi
      781 lqidfptsaf dikftspagd kfspryefgs lreedqhvlk nimqkeslhw ltdadkkrlw
      841 ekryychaev salplvlasa pswewaclpd tyallaqwtp mnhqdalgll hatfpdqevr
      901 rmavqwigsl sdaelldylp qlvqalkyec yldsplvrfl lkravsdlrv thyffwllkd
      961 glkdsqfsir yqyllaallc ccgkglreef nrqcwlvntl aklaqqvrea apsarqgilr
     1021 tgleeveqff tlngscrlpl spsllvkgiv prdcsyfnsn avplklsfqn vdplgenirv
     1081 ifkcgddlrq dmltlqmiri mskiwvqegl dmrmvifrcf stgrgrgmve mipnsetlrk
     1141 iqvehgvtgs fkdrpladwl qkhnpgedey ekavenfiys cagccvatyv lgicdrhndn
     1201 imlkttghmf hidfgrflgh aqmfgnikrd rapfvftsdm ayvinggdkp ssrfhdfvdl
     1261 ccqaynlirk hthlflnllg lmlscgipel sdledlkyvy dalrpqdtea nattyftrli
     1321 esslgsvatk lnffihnlaq mkflgsddrl tlsfaprtht lkssgrisdv flcrhekvfh
     1381 pnkgyiyvvk vmrenaheat yiqrtfeefq elhnklrllf pssllpsfps rfvigrsrge
     1441 agaerrreel ngyiwhlvha apevaecdlv ytffhplprd ekatgsslap rssegtwarp
     1501 vgkvggevkl sisyknnklf imvmhirglq llqdgndpdp yvkiyllpdp qkttkkktkv
     1561 arktcnptyn emlvydgipk gdlrqrelql svlseqgfwe nvllgevhir lreldlaqek
     1621 tgwfalgsrs petl
//
LOCUS       XP_061015868            1634 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing
            subunit beta isoform X1 [Dama dama].
ACCESSION   XP_061015868
VERSION     XP_061015868.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159885.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1634
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1634
                     /product="phosphatidylinositol 4-phosphate 3-kinase C2
                     domain-containing subunit beta isoform X1"
                     /calculated_mol_wt=184436
     Region          364..466
                     /region_name="PI3K_rbd"
                     /note="PI3-kinase family, ras-binding domain; pfam00794"
                     /db_xref="CDD:395642"
     Region          622..794
                     /region_name="C2A_PI3K_class_II"
                     /note="C2 domain first repeat present in class II
                     phosphatidylinositol 3-kinases (PI3Ks); cd04012"
                     /db_xref="CDD:175979"
     Region          813..981
                     /region_name="PI3Ka_II"
                     /note="Phosphoinositide 3-kinase (PI3K) class II,
                     accessory domain (PIK domain); PIK domain is conserved in
                     all PI3 and PI4-kinases. Its role is unclear but it has
                     been suggested to be involved in substrate presentation.
                     In general, class II PI3-kinases...; cd00869"
                     /db_xref="CDD:238441"
     Region          987..1340
                     /region_name="PI3Kc_C2_beta"
                     /note="Catalytic domain of Class II Phosphoinositide
                     3-kinase beta; cd00895"
                     /db_xref="CDD:119421"
     Site            order(1057,1059..1061,1063,1081,1083,1086,1117,1129..1132,
                     1137,1140,1200,1202,1212..1213)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:119421"
     Site            1192..1200
                     /site_type="active"
                     /note="catalytic loop [active]"
                     /db_xref="CDD:119421"
     Site            1213..1237
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:119421"
     Region          1369..1477
                     /region_name="PX_PI3K_C2_beta"
                     /note="The phosphoinositide binding Phox Homology Domain
                     of the Beta Isoform of Class II Phosphoinositide
                     3-Kinases; cd07290"
                     /db_xref="CDD:132823"
     Site            order(1405..1407,1431..1432,1446)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132823"
     Region          1505..1627
                     /region_name="C2B_PI3K_class_II"
                     /note="C2 domain second repeat present in class II
                     phosphatidylinositol 3-kinases (PI3Ks); cd08381"
                     /db_xref="CDD:176027"
     Site            1555..1565
                     /site_type="active"
                     /note="nuclear localization signal [active]"
                     /db_xref="CDD:176027"
     CDS             1..1634
                     /gene="PIK3C2B"
                     /coded_by="XM_061159885.1:194..5098"
                     /db_xref="GeneID:133068936"
ORIGIN      
        1 msstqgsgeh wkslesvgis rkelamaeal qmeydalsrl rhdkeesrak rnadpslisw
       61 depvldfysk pvgrrkdlkl lrglsgsdpt lnynsvspqe glpnhstsqg sqpgpdpwpk
      121 gslaedylyi fdgsdrglsl spgprdredy skklsppplp prvsiwdtpp lpprkgspss
      181 skvsqpsdin tlslveqppg kllgpqilee eeepgggspg rplgsvdydg indaitrlnl
      241 kstydaemlr datrgwkegr gpldfakdtp gkpvarsktm ppqvpprtya sryanrknaa
      301 pgknrrisaa pvgsrphtia nghelfevse erdeevaafc hmldvlrsgs dvrdysltgy
      361 vwsavtpspe hlgdevnlkv tvlcdslrep ltftcncsst vdlliyqtlc ytrdelrdvd
      421 vgdfvlkpcg leeflqnkha lgsheyiqyc rkfdidirlq lmerkavrsd lartanddqs
      481 psslnylvhl qerpvkqtis rqalsllfdt yhnevdafll adgdfplkad rvvqsvkaic
      541 nalaavetpe itsalnqlpp cpsrmkpkiq kdptvlavre nrekvvealt aaildlvely
      601 cntfnadfqt aapgsrkhav vqeachlsgp laftvyathr ipivwatsye efylscslsh
      661 ggkelcsplq trrvhfskyl fhlviwdqqi cfpvqvnrlp retllcatly alpvpppgss
      721 seankqrrvp ealgwvtapl fnfrqvltcg rkllglwpat qespsarwsa pnfhqpdsvi
      781 lqidfptsaf dikftspagd kfspryefgs lreedqhvlk nimqkeslhw ltdadkkrlw
      841 ekryychaev salplvlasa pswewaclpd tyallaqwtp mnhqdalgll hatfpdqevr
      901 rmavqwigsl sdaelldylp qlvqalkyec yldsplvrfl lkravsdlrv thyffwllkd
      961 glkdsqfsir yqyllaallc ccgkglreef nrqcwlvntl aklaqqvrea apsarqgilr
     1021 tgleeveqff tlngscrlpl spsllvkgiv prdcsyfnsn avplklsfqn vdplgenirv
     1081 ifkcgddlrq dmltlqmiri mskiwvqegl dmrmvifrcf stgrgrgmve mipnsetlrk
     1141 iqvehgvtgs fkdrpladwl qkhnpgedey ekavenfiys cagccvatyv lgicdrhndn
     1201 imlkttghmf hidfgrflgh aqmfgnikrd rapfvftsdm ayvinggdkp ssrfhdfvdl
     1261 ccqaynlirk hthlflnllg lmlscgipel sdledlkyvy dalrpqdtea nattyftrli
     1321 esslgsvatk lnffihnlaq mkflgsddrl tlsfaprtht lkssgrisdv flcrhekvfh
     1381 pnkgyiyvvk vmrenaheat yiqrtfeefq elhnklrllf pssllpsfps rfvigrsrge
     1441 agaerrreel ngyiwhlvha apevaecdlv ytffhplprd ekatgsslap rssegtwarp
     1501 vgkvggevkl sisyknnklf imvmhirglq llqdgndpdp yvkiyllpdp qkttkkktkv
     1561 arktcnptyn emlvydgipk gdlrqrelql svlseqgfwe nvllgevhir lreldlaqek
     1621 tgwfalgsrs petl
//
LOCUS       XP_061015869            1612 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing
            subunit beta isoform X2 [Dama dama].
ACCESSION   XP_061015869
VERSION     XP_061015869.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159886.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1612
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1612
                     /product="phosphatidylinositol 4-phosphate 3-kinase C2
                     domain-containing subunit beta isoform X2"
                     /calculated_mol_wt=181912
     Region          364..466
                     /region_name="PI3K_rbd"
                     /note="PI3-kinase family, ras-binding domain; pfam00794"
                     /db_xref="CDD:395642"
     Region          622..794
                     /region_name="C2A_PI3K_class_II"
                     /note="C2 domain first repeat present in class II
                     phosphatidylinositol 3-kinases (PI3Ks); cd04012"
                     /db_xref="CDD:175979"
     Region          813..981
                     /region_name="PI3Ka_II"
                     /note="Phosphoinositide 3-kinase (PI3K) class II,
                     accessory domain (PIK domain); PIK domain is conserved in
                     all PI3 and PI4-kinases. Its role is unclear but it has
                     been suggested to be involved in substrate presentation.
                     In general, class II PI3-kinases...; cd00869"
                     /db_xref="CDD:238441"
     Region          987..1340
                     /region_name="PI3Kc_C2_beta"
                     /note="Catalytic domain of Class II Phosphoinositide
                     3-kinase beta; cd00895"
                     /db_xref="CDD:119421"
     Site            order(1057,1059..1061,1063,1081,1083,1086,1117,1129..1132,
                     1137,1140,1200,1202,1212..1213)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:119421"
     Site            1192..1200
                     /site_type="active"
                     /note="catalytic loop [active]"
                     /db_xref="CDD:119421"
     Site            1213..1237
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:119421"
     Region          1369..1477
                     /region_name="PX_PI3K_C2_beta"
                     /note="The phosphoinositide binding Phox Homology Domain
                     of the Beta Isoform of Class II Phosphoinositide
                     3-Kinases; cd07290"
                     /db_xref="CDD:132823"
     Site            order(1405..1407,1431..1432,1446)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132823"
     Region          1505..1605
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     CDS             1..1612
                     /gene="PIK3C2B"
                     /coded_by="XM_061159886.1:400..5238"
                     /db_xref="GeneID:133068936"
ORIGIN      
        1 msstqgsgeh wkslesvgis rkelamaeal qmeydalsrl rhdkeesrak rnadpslisw
       61 depvldfysk pvgrrkdlkl lrglsgsdpt lnynsvspqe glpnhstsqg sqpgpdpwpk
      121 gslaedylyi fdgsdrglsl spgprdredy skklsppplp prvsiwdtpp lpprkgspss
      181 skvsqpsdin tlslveqppg kllgpqilee eeepgggspg rplgsvdydg indaitrlnl
      241 kstydaemlr datrgwkegr gpldfakdtp gkpvarsktm ppqvpprtya sryanrknaa
      301 pgknrrisaa pvgsrphtia nghelfevse erdeevaafc hmldvlrsgs dvrdysltgy
      361 vwsavtpspe hlgdevnlkv tvlcdslrep ltftcncsst vdlliyqtlc ytrdelrdvd
      421 vgdfvlkpcg leeflqnkha lgsheyiqyc rkfdidirlq lmerkavrsd lartanddqs
      481 psslnylvhl qerpvkqtis rqalsllfdt yhnevdafll adgdfplkad rvvqsvkaic
      541 nalaavetpe itsalnqlpp cpsrmkpkiq kdptvlavre nrekvvealt aaildlvely
      601 cntfnadfqt aapgsrkhav vqeachlsgp laftvyathr ipivwatsye efylscslsh
      661 ggkelcsplq trrvhfskyl fhlviwdqqi cfpvqvnrlp retllcatly alpvpppgss
      721 seankqrrvp ealgwvtapl fnfrqvltcg rkllglwpat qespsarwsa pnfhqpdsvi
      781 lqidfptsaf dikftspagd kfspryefgs lreedqhvlk nimqkeslhw ltdadkkrlw
      841 ekryychaev salplvlasa pswewaclpd tyallaqwtp mnhqdalgll hatfpdqevr
      901 rmavqwigsl sdaelldylp qlvqalkyec yldsplvrfl lkravsdlrv thyffwllkd
      961 glkdsqfsir yqyllaallc ccgkglreef nrqcwlvntl aklaqqvrea apsarqgilr
     1021 tgleeveqff tlngscrlpl spsllvkgiv prdcsyfnsn avplklsfqn vdplgenirv
     1081 ifkcgddlrq dmltlqmiri mskiwvqegl dmrmvifrcf stgrgrgmve mipnsetlrk
     1141 iqvehgvtgs fkdrpladwl qkhnpgedey ekavenfiys cagccvatyv lgicdrhndn
     1201 imlkttghmf hidfgrflgh aqmfgnikrd rapfvftsdm ayvinggdkp ssrfhdfvdl
     1261 ccqaynlirk hthlflnllg lmlscgipel sdledlkyvy dalrpqdtea nattyftrli
     1321 esslgsvatk lnffihnlaq mkflgsddrl tlsfaprtht lkssgrisdv flcrhekvfh
     1381 pnkgyiyvvk vmrenaheat yiqrtfeefq elhnklrllf pssllpsfps rfvigrsrge
     1441 agaerrreel ngyiwhlvha apevaecdlv ytffhplprd ekatgsslap rssegtwarp
     1501 vgkvggevkl sisyknnklf imvmhirglk ttkkktkvar ktcnptynem lvydgipkgd
     1561 lrqrelqlsv lseqgfwenv llgevhirlr eldlaqektg wfalgsrspe tl
//
LOCUS       XP_061015870            1471 aa            linear   MAM 02-DEC-2023
DEFINITION  phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing
            subunit beta isoform X3 [Dama dama].
ACCESSION   XP_061015870
VERSION     XP_061015870.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159887.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1471
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1471
                     /product="phosphatidylinositol 4-phosphate 3-kinase C2
                     domain-containing subunit beta isoform X3"
                     /calculated_mol_wt=165854
     Region          364..466
                     /region_name="PI3K_rbd"
                     /note="PI3-kinase family, ras-binding domain; pfam00794"
                     /db_xref="CDD:395642"
     Region          622..794
                     /region_name="C2A_PI3K_class_II"
                     /note="C2 domain first repeat present in class II
                     phosphatidylinositol 3-kinases (PI3Ks); cd04012"
                     /db_xref="CDD:175979"
     Region          813..981
                     /region_name="PI3Ka_II"
                     /note="Phosphoinositide 3-kinase (PI3K) class II,
                     accessory domain (PIK domain); PIK domain is conserved in
                     all PI3 and PI4-kinases. Its role is unclear but it has
                     been suggested to be involved in substrate presentation.
                     In general, class II PI3-kinases...; cd00869"
                     /db_xref="CDD:238441"
     Region          987..1340
                     /region_name="PI3Kc_C2_beta"
                     /note="Catalytic domain of Class II Phosphoinositide
                     3-kinase beta; cd00895"
                     /db_xref="CDD:119421"
     Site            order(1057,1059..1061,1063,1081,1083,1086,1117,1129..1132,
                     1137,1140,1200,1202,1212..1213)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:119421"
     Site            1192..1200
                     /site_type="active"
                     /note="catalytic loop [active]"
                     /db_xref="CDD:119421"
     Site            1213..1237
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:119421"
     Region          1369..>1427
                     /region_name="PX_domain"
                     /note="The Phox Homology domain, a phosphoinositide
                     binding module; cl02563"
                     /db_xref="CDD:470617"
     CDS             1..1471
                     /gene="PIK3C2B"
                     /coded_by="XM_061159887.1:402..4817"
                     /db_xref="GeneID:133068936"
ORIGIN      
        1 msstqgsgeh wkslesvgis rkelamaeal qmeydalsrl rhdkeesrak rnadpslisw
       61 depvldfysk pvgrrkdlkl lrglsgsdpt lnynsvspqe glpnhstsqg sqpgpdpwpk
      121 gslaedylyi fdgsdrglsl spgprdredy skklsppplp prvsiwdtpp lpprkgspss
      181 skvsqpsdin tlslveqppg kllgpqilee eeepgggspg rplgsvdydg indaitrlnl
      241 kstydaemlr datrgwkegr gpldfakdtp gkpvarsktm ppqvpprtya sryanrknaa
      301 pgknrrisaa pvgsrphtia nghelfevse erdeevaafc hmldvlrsgs dvrdysltgy
      361 vwsavtpspe hlgdevnlkv tvlcdslrep ltftcncsst vdlliyqtlc ytrdelrdvd
      421 vgdfvlkpcg leeflqnkha lgsheyiqyc rkfdidirlq lmerkavrsd lartanddqs
      481 psslnylvhl qerpvkqtis rqalsllfdt yhnevdafll adgdfplkad rvvqsvkaic
      541 nalaavetpe itsalnqlpp cpsrmkpkiq kdptvlavre nrekvvealt aaildlvely
      601 cntfnadfqt aapgsrkhav vqeachlsgp laftvyathr ipivwatsye efylscslsh
      661 ggkelcsplq trrvhfskyl fhlviwdqqi cfpvqvnrlp retllcatly alpvpppgss
      721 seankqrrvp ealgwvtapl fnfrqvltcg rkllglwpat qespsarwsa pnfhqpdsvi
      781 lqidfptsaf dikftspagd kfspryefgs lreedqhvlk nimqkeslhw ltdadkkrlw
      841 ekryychaev salplvlasa pswewaclpd tyallaqwtp mnhqdalgll hatfpdqevr
      901 rmavqwigsl sdaelldylp qlvqalkyec yldsplvrfl lkravsdlrv thyffwllkd
      961 glkdsqfsir yqyllaallc ccgkglreef nrqcwlvntl aklaqqvrea apsarqgilr
     1021 tgleeveqff tlngscrlpl spsllvkgiv prdcsyfnsn avplklsfqn vdplgenirv
     1081 ifkcgddlrq dmltlqmiri mskiwvqegl dmrmvifrcf stgrgrgmve mipnsetlrk
     1141 iqvehgvtgs fkdrpladwl qkhnpgedey ekavenfiys cagccvatyv lgicdrhndn
     1201 imlkttghmf hidfgrflgh aqmfgnikrd rapfvftsdm ayvinggdkp ssrfhdfvdl
     1261 ccqaynlirk hthlflnllg lmlscgipel sdledlkyvy dalrpqdtea nattyftrli
     1321 esslgsvatk lnffihnlaq mkflgsddrl tlsfaprtht lkssgrisdv flcrhekvfh
     1381 pnkgyiyvvk vmrenaheat yiqrtfeefq elhnklrllf pssllpsvrc carvlaqawg
     1441 agpgvqsgrg pwngrpgemr irwlkmkaew d
//
LOCUS       XP_061015871             491 aa            linear   MAM 02-DEC-2023
DEFINITION  protein Mdm4 isoform X1 [Dama dama].
ACCESSION   XP_061015871
VERSION     XP_061015871.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159888.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..491
                     /product="protein Mdm4 isoform X1"
                     /calculated_mol_wt=55018
     Region          29..107
                     /region_name="MDM4"
                     /note="p53-binding domain found in MDM4 and similar
                     proteins; cd17673"
                     /db_xref="CDD:349492"
     Site            order(53,56..57,60..61,66,71..72,74,92,95,98..99)
                     /site_type="other"
                     /note="p53 binding site [polypeptide binding]"
                     /db_xref="CDD:349492"
     Region          300..329
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          433..491
                     /region_name="mRING-HC-C2H2C4_MDM4"
                     /note="Modified RING finger, HC subclass (C2H2C4-type),
                     found in protein MDM4 and similar proteins; cd16784"
                     /db_xref="CDD:319698"
     Site            order(449,451,453..459,477,484,486..487)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:319698"
     CDS             1..491
                     /gene="MDM4"
                     /coded_by="XM_061159888.1:136..1611"
                     /db_xref="GeneID:133068937"
ORIGIN      
        1 mtsfstsaqc sasdsacris peqtnqvrpk lpllkilqaa gaqgemftvk evmhylgqyi
       61 mvkqlydqqe qhmvycggdl lgellgrqsf svkdpsplyd mlrknlvtla tattdaaqtl
      121 aiaqehsmdi psqdrpkqsv eespssrkrt eegnipalpt sqykcrssra dedlvanltq
      181 eetsrldlgf eewdvaglpw wflgnlrnny tprsngstdl qtnqdigtai vsdttddlwf
      241 lnesvseqfg vgikveaadp eqtseevgkv rdkkvvdmgk nddledpesi sddtdtevts
      301 edewqcteck kfnspskryc frcwalrkdw ysdcsklths lstsaitaip ekqesegidv
      361 pdcrrtvsap vvrpkdiyik eensehfdpc nsvefldlah ssesqetvss mveqsdnlfe
      421 qrkdtenmed cqnllkpcsl cekrprdgni ihgrtghlvt cfhcarrlkk agascpickk
      481 eiqlvikvfv a
//
LOCUS       XP_061015872             491 aa            linear   MAM 02-DEC-2023
DEFINITION  protein Mdm4 isoform X1 [Dama dama].
ACCESSION   XP_061015872
VERSION     XP_061015872.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159889.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..491
                     /product="protein Mdm4 isoform X1"
                     /calculated_mol_wt=55018
     Region          29..107
                     /region_name="MDM4"
                     /note="p53-binding domain found in MDM4 and similar
                     proteins; cd17673"
                     /db_xref="CDD:349492"
     Site            order(53,56..57,60..61,66,71..72,74,92,95,98..99)
                     /site_type="other"
                     /note="p53 binding site [polypeptide binding]"
                     /db_xref="CDD:349492"
     Region          300..329
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          433..491
                     /region_name="mRING-HC-C2H2C4_MDM4"
                     /note="Modified RING finger, HC subclass (C2H2C4-type),
                     found in protein MDM4 and similar proteins; cd16784"
                     /db_xref="CDD:319698"
     Site            order(449,451,453..459,477,484,486..487)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:319698"
     CDS             1..491
                     /gene="MDM4"
                     /coded_by="XM_061159889.1:166..1641"
                     /db_xref="GeneID:133068937"
ORIGIN      
        1 mtsfstsaqc sasdsacris peqtnqvrpk lpllkilqaa gaqgemftvk evmhylgqyi
       61 mvkqlydqqe qhmvycggdl lgellgrqsf svkdpsplyd mlrknlvtla tattdaaqtl
      121 aiaqehsmdi psqdrpkqsv eespssrkrt eegnipalpt sqykcrssra dedlvanltq
      181 eetsrldlgf eewdvaglpw wflgnlrnny tprsngstdl qtnqdigtai vsdttddlwf
      241 lnesvseqfg vgikveaadp eqtseevgkv rdkkvvdmgk nddledpesi sddtdtevts
      301 edewqcteck kfnspskryc frcwalrkdw ysdcsklths lstsaitaip ekqesegidv
      361 pdcrrtvsap vvrpkdiyik eensehfdpc nsvefldlah ssesqetvss mveqsdnlfe
      421 qrkdtenmed cqnllkpcsl cekrprdgni ihgrtghlvt cfhcarrlkk agascpickk
      481 eiqlvikvfv a
//
LOCUS       XP_061015873             491 aa            linear   MAM 02-DEC-2023
DEFINITION  protein Mdm4 isoform X1 [Dama dama].
ACCESSION   XP_061015873
VERSION     XP_061015873.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159890.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..491
                     /product="protein Mdm4 isoform X1"
                     /calculated_mol_wt=55018
     Region          29..107
                     /region_name="MDM4"
                     /note="p53-binding domain found in MDM4 and similar
                     proteins; cd17673"
                     /db_xref="CDD:349492"
     Site            order(53,56..57,60..61,66,71..72,74,92,95,98..99)
                     /site_type="other"
                     /note="p53 binding site [polypeptide binding]"
                     /db_xref="CDD:349492"
     Region          300..329
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          433..491
                     /region_name="mRING-HC-C2H2C4_MDM4"
                     /note="Modified RING finger, HC subclass (C2H2C4-type),
                     found in protein MDM4 and similar proteins; cd16784"
                     /db_xref="CDD:319698"
     Site            order(449,451,453..459,477,484,486..487)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:319698"
     CDS             1..491
                     /gene="MDM4"
                     /coded_by="XM_061159890.1:417..1892"
                     /db_xref="GeneID:133068937"
ORIGIN      
        1 mtsfstsaqc sasdsacris peqtnqvrpk lpllkilqaa gaqgemftvk evmhylgqyi
       61 mvkqlydqqe qhmvycggdl lgellgrqsf svkdpsplyd mlrknlvtla tattdaaqtl
      121 aiaqehsmdi psqdrpkqsv eespssrkrt eegnipalpt sqykcrssra dedlvanltq
      181 eetsrldlgf eewdvaglpw wflgnlrnny tprsngstdl qtnqdigtai vsdttddlwf
      241 lnesvseqfg vgikveaadp eqtseevgkv rdkkvvdmgk nddledpesi sddtdtevts
      301 edewqcteck kfnspskryc frcwalrkdw ysdcsklths lstsaitaip ekqesegidv
      361 pdcrrtvsap vvrpkdiyik eensehfdpc nsvefldlah ssesqetvss mveqsdnlfe
      421 qrkdtenmed cqnllkpcsl cekrprdgni ihgrtghlvt cfhcarrlkk agascpickk
      481 eiqlvikvfv a
//
LOCUS       XP_061015874             491 aa            linear   MAM 02-DEC-2023
DEFINITION  protein Mdm4 isoform X1 [Dama dama].
ACCESSION   XP_061015874
VERSION     XP_061015874.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159891.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..491
                     /product="protein Mdm4 isoform X1"
                     /calculated_mol_wt=55018
     Region          29..107
                     /region_name="MDM4"
                     /note="p53-binding domain found in MDM4 and similar
                     proteins; cd17673"
                     /db_xref="CDD:349492"
     Site            order(53,56..57,60..61,66,71..72,74,92,95,98..99)
                     /site_type="other"
                     /note="p53 binding site [polypeptide binding]"
                     /db_xref="CDD:349492"
     Region          300..329
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          433..491
                     /region_name="mRING-HC-C2H2C4_MDM4"
                     /note="Modified RING finger, HC subclass (C2H2C4-type),
                     found in protein MDM4 and similar proteins; cd16784"
                     /db_xref="CDD:319698"
     Site            order(449,451,453..459,477,484,486..487)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:319698"
     CDS             1..491
                     /gene="MDM4"
                     /coded_by="XM_061159891.1:203..1678"
                     /db_xref="GeneID:133068937"
ORIGIN      
        1 mtsfstsaqc sasdsacris peqtnqvrpk lpllkilqaa gaqgemftvk evmhylgqyi
       61 mvkqlydqqe qhmvycggdl lgellgrqsf svkdpsplyd mlrknlvtla tattdaaqtl
      121 aiaqehsmdi psqdrpkqsv eespssrkrt eegnipalpt sqykcrssra dedlvanltq
      181 eetsrldlgf eewdvaglpw wflgnlrnny tprsngstdl qtnqdigtai vsdttddlwf
      241 lnesvseqfg vgikveaadp eqtseevgkv rdkkvvdmgk nddledpesi sddtdtevts
      301 edewqcteck kfnspskryc frcwalrkdw ysdcsklths lstsaitaip ekqesegidv
      361 pdcrrtvsap vvrpkdiyik eensehfdpc nsvefldlah ssesqetvss mveqsdnlfe
      421 qrkdtenmed cqnllkpcsl cekrprdgni ihgrtghlvt cfhcarrlkk agascpickk
      481 eiqlvikvfv a
//
LOCUS       XP_061015875             491 aa            linear   MAM 02-DEC-2023
DEFINITION  protein Mdm4 isoform X1 [Dama dama].
ACCESSION   XP_061015875
VERSION     XP_061015875.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159892.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..491
                     /product="protein Mdm4 isoform X1"
                     /calculated_mol_wt=55018
     Region          29..107
                     /region_name="MDM4"
                     /note="p53-binding domain found in MDM4 and similar
                     proteins; cd17673"
                     /db_xref="CDD:349492"
     Site            order(53,56..57,60..61,66,71..72,74,92,95,98..99)
                     /site_type="other"
                     /note="p53 binding site [polypeptide binding]"
                     /db_xref="CDD:349492"
     Region          300..329
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          433..491
                     /region_name="mRING-HC-C2H2C4_MDM4"
                     /note="Modified RING finger, HC subclass (C2H2C4-type),
                     found in protein MDM4 and similar proteins; cd16784"
                     /db_xref="CDD:319698"
     Site            order(449,451,453..459,477,484,486..487)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:319698"
     CDS             1..491
                     /gene="MDM4"
                     /coded_by="XM_061159892.1:148..1623"
                     /db_xref="GeneID:133068937"
ORIGIN      
        1 mtsfstsaqc sasdsacris peqtnqvrpk lpllkilqaa gaqgemftvk evmhylgqyi
       61 mvkqlydqqe qhmvycggdl lgellgrqsf svkdpsplyd mlrknlvtla tattdaaqtl
      121 aiaqehsmdi psqdrpkqsv eespssrkrt eegnipalpt sqykcrssra dedlvanltq
      181 eetsrldlgf eewdvaglpw wflgnlrnny tprsngstdl qtnqdigtai vsdttddlwf
      241 lnesvseqfg vgikveaadp eqtseevgkv rdkkvvdmgk nddledpesi sddtdtevts
      301 edewqcteck kfnspskryc frcwalrkdw ysdcsklths lstsaitaip ekqesegidv
      361 pdcrrtvsap vvrpkdiyik eensehfdpc nsvefldlah ssesqetvss mveqsdnlfe
      421 qrkdtenmed cqnllkpcsl cekrprdgni ihgrtghlvt cfhcarrlkk agascpickk
      481 eiqlvikvfv a
//
LOCUS       XP_061015877             491 aa            linear   MAM 02-DEC-2023
DEFINITION  protein Mdm4 isoform X1 [Dama dama].
ACCESSION   XP_061015877
VERSION     XP_061015877.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159894.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..491
                     /product="protein Mdm4 isoform X1"
                     /calculated_mol_wt=55018
     Region          29..107
                     /region_name="MDM4"
                     /note="p53-binding domain found in MDM4 and similar
                     proteins; cd17673"
                     /db_xref="CDD:349492"
     Site            order(53,56..57,60..61,66,71..72,74,92,95,98..99)
                     /site_type="other"
                     /note="p53 binding site [polypeptide binding]"
                     /db_xref="CDD:349492"
     Region          300..329
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          433..491
                     /region_name="mRING-HC-C2H2C4_MDM4"
                     /note="Modified RING finger, HC subclass (C2H2C4-type),
                     found in protein MDM4 and similar proteins; cd16784"
                     /db_xref="CDD:319698"
     Site            order(449,451,453..459,477,484,486..487)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:319698"
     CDS             1..491
                     /gene="MDM4"
                     /coded_by="XM_061159894.1:414..1889"
                     /db_xref="GeneID:133068937"
ORIGIN      
        1 mtsfstsaqc sasdsacris peqtnqvrpk lpllkilqaa gaqgemftvk evmhylgqyi
       61 mvkqlydqqe qhmvycggdl lgellgrqsf svkdpsplyd mlrknlvtla tattdaaqtl
      121 aiaqehsmdi psqdrpkqsv eespssrkrt eegnipalpt sqykcrssra dedlvanltq
      181 eetsrldlgf eewdvaglpw wflgnlrnny tprsngstdl qtnqdigtai vsdttddlwf
      241 lnesvseqfg vgikveaadp eqtseevgkv rdkkvvdmgk nddledpesi sddtdtevts
      301 edewqcteck kfnspskryc frcwalrkdw ysdcsklths lstsaitaip ekqesegidv
      361 pdcrrtvsap vvrpkdiyik eensehfdpc nsvefldlah ssesqetvss mveqsdnlfe
      421 qrkdtenmed cqnllkpcsl cekrprdgni ihgrtghlvt cfhcarrlkk agascpickk
      481 eiqlvikvfv a
//
LOCUS       XP_061015878             173 aa            linear   MAM 02-DEC-2023
DEFINITION  protein Mdm4 isoform X2 [Dama dama].
ACCESSION   XP_061015878
VERSION     XP_061015878.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159895.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..173
                     /product="protein Mdm4 isoform X2"
                     /calculated_mol_wt=18872
     Region          75..153
                     /region_name="MDM4"
                     /note="p53-binding domain found in MDM4 and similar
                     proteins; cd17673"
                     /db_xref="CDD:349492"
     Site            order(99,102..103,106..107,112,117..118,120,138,141,
                     144..145)
                     /site_type="other"
                     /note="p53 binding site [polypeptide binding]"
                     /db_xref="CDD:349492"
     CDS             1..173
                     /gene="MDM4"
                     /coded_by="XM_061159895.1:25..546"
                     /db_xref="GeneID:133068937"
ORIGIN      
        1 mrresaeddg gsavtrhgsa gglptgsrdg wcsigrkqts hhftakmtsf stsaqcsasd
       61 sacrispeqt nqvrpklpll kilqaagaqg emftvkevmh ylgqyimvkq lydqqeqhmv
      121 ycggdllgel lgrqsfsvkd psplydmlrk nlvtlatatt akcrgkpqfq ekn
//
LOCUS       XP_061015879             168 aa            linear   MAM 02-DEC-2023
DEFINITION  protein Mdm4 isoform X3 [Dama dama].
ACCESSION   XP_061015879
VERSION     XP_061015879.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159896.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..168
                     /product="protein Mdm4 isoform X3"
                     /calculated_mol_wt=18396
     Region          75..153
                     /region_name="MDM4"
                     /note="p53-binding domain found in MDM4 and similar
                     proteins; cd17673"
                     /db_xref="CDD:349492"
     Site            order(99,102..103,106..107,112,117..118,120,138,141,
                     144..145)
                     /site_type="other"
                     /note="p53 binding site [polypeptide binding]"
                     /db_xref="CDD:349492"
     CDS             1..168
                     /gene="MDM4"
                     /coded_by="XM_061159896.1:29..535"
                     /db_xref="GeneID:133068937"
ORIGIN      
        1 mrresaeddg gsavtrhgsa gglptgsrdg wcsigrkqts hhftakmtsf stsaqcsasd
       61 sacrispeqt nqvrpklpll kilqaagaqg emftvkevmh ylgqyimvkq lydqqeqhmv
      121 ycggdllgel lgrqsfsvkd psplydmlrk nlvtlatatt efnmlyik
//
LOCUS       XP_061015880             712 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat neuronal protein 2 [Dama dama].
ACCESSION   XP_061015880
VERSION     XP_061015880.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159897.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..712
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..712
                     /product="leucine-rich repeat neuronal protein 2"
                     /calculated_mol_wt=78531
     Region          28..72
                     /region_name="LRRNT"
                     /note="Leucine rich repeat N-terminal domain; smart00013"
                     /db_xref="CDD:214470"
     Region          72..94
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <85..>324
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          95..118
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          119..142
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          143..166
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          167..190
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          191..214
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          215..238
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          239..262
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          263..286
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          287..311
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          310..371
                     /region_name="LRR_8"
                     /note="Leucine rich repeat; pfam13855"
                     /db_xref="CDD:404697"
     Region          312..334
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          337..360
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          342..>420
                     /region_name="PCC"
                     /note="polycystin cation channel protein; TIGR00864"
                     /db_xref="CDD:188093"
     Region          361..373
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          422..514
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          441..445
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          454..458
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          480..484
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          494..499
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          507..510
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..712
                     /gene="LRRN2"
                     /coded_by="XM_061159897.1:303..2441"
                     /db_xref="GeneID:133068938"
ORIGIN      
        1 mrllvaplll awvagatatv pvvpwhvpcp pgcacqirpw ytprssyrea ttvdcndlfl
       61 tavppalpag tqtlllqsns ivrvdqselg ylanlteldl sqnsfsdprd cdlralpqll
      121 slhleenrlt rledhsfagl aslqelylnh nqlyriapra faglsnllrl hlnsnllrav
      181 dnrwfemlps leilmiggnk vdaildmnfr planlrslvl agmslreisd yaleglqsle
      241 slsfydnrla rvprraleqv pglkfldlnk nplqrvgpgd fanmlhlkel glnnmeelvs
      301 idkfalvnlp eltklditnn prlsfihpra fhhlpqmetl mlnnnalsal hqqtveslpn
      361 lqevglhgnp ircdcvirwa natstrirfi epqstlcaep pdlqrlpvre vafremtdhc
      421 lplisprsfp rrlqvasgas lvlhcralae pepeiywvtp agvrltaawa ghkyrvypeg
      481 tlelrrvtaq eaglytcvaq nlvgadtktv svvvgrappq hgrdkgwgle lrvqethpyh
      541 illswvsppn tvstnltwas astlqghgat tlarlprgth synitrllqa teywaclqva
      601 fadahtqlac vwartteaas crrglgdqpg liailalavl llaaglaahl gagqprqgvg
      661 grpllpvwaf wgwstpsarv vsaplvlhwd pgrkwprsse ggtlsppssq ss
//
LOCUS       XP_061015881             712 aa            linear   MAM 02-DEC-2023
DEFINITION  leucine-rich repeat neuronal protein 2 [Dama dama].
ACCESSION   XP_061015881
VERSION     XP_061015881.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159898.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..712
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..712
                     /product="leucine-rich repeat neuronal protein 2"
                     /calculated_mol_wt=78531
     Region          28..72
                     /region_name="LRRNT"
                     /note="Leucine rich repeat N-terminal domain; smart00013"
                     /db_xref="CDD:214470"
     Region          72..94
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <85..>324
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          95..118
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          119..142
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          143..166
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          167..190
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          191..214
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          215..238
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          239..262
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          263..286
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          287..311
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          310..371
                     /region_name="LRR_8"
                     /note="Leucine rich repeat; pfam13855"
                     /db_xref="CDD:404697"
     Region          312..334
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          337..360
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          342..>420
                     /region_name="PCC"
                     /note="polycystin cation channel protein; TIGR00864"
                     /db_xref="CDD:188093"
     Region          361..373
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          422..514
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          441..445
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          454..458
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          480..484
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          494..499
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          507..510
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..712
                     /gene="LRRN2"
                     /coded_by="XM_061159898.1:919..3057"
                     /db_xref="GeneID:133068938"
ORIGIN      
        1 mrllvaplll awvagatatv pvvpwhvpcp pgcacqirpw ytprssyrea ttvdcndlfl
       61 tavppalpag tqtlllqsns ivrvdqselg ylanlteldl sqnsfsdprd cdlralpqll
      121 slhleenrlt rledhsfagl aslqelylnh nqlyriapra faglsnllrl hlnsnllrav
      181 dnrwfemlps leilmiggnk vdaildmnfr planlrslvl agmslreisd yaleglqsle
      241 slsfydnrla rvprraleqv pglkfldlnk nplqrvgpgd fanmlhlkel glnnmeelvs
      301 idkfalvnlp eltklditnn prlsfihpra fhhlpqmetl mlnnnalsal hqqtveslpn
      361 lqevglhgnp ircdcvirwa natstrirfi epqstlcaep pdlqrlpvre vafremtdhc
      421 lplisprsfp rrlqvasgas lvlhcralae pepeiywvtp agvrltaawa ghkyrvypeg
      481 tlelrrvtaq eaglytcvaq nlvgadtktv svvvgrappq hgrdkgwgle lrvqethpyh
      541 illswvsppn tvstnltwas astlqghgat tlarlprgth synitrllqa teywaclqva
      601 fadahtqlac vwartteaas crrglgdqpg liailalavl llaaglaahl gagqprqgvg
      661 grpllpvwaf wgwstpsarv vsaplvlhwd pgrkwprsse ggtlsppssq ss
//
LOCUS       XP_061015882            1339 aa            linear   MAM 02-DEC-2023
DEFINITION  neurofascin [Dama dama].
ACCESSION   XP_061015882
VERSION     XP_061015882.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159899.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1339
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1339
                     /product="neurofascin"
                     /calculated_mol_wt=148780
     Region          40..134
                     /region_name="IgI_hNeurofascin_like"
                     /note="Immunoglobulin (Ig)-like domain of human
                     neurofascin (NF); member of the I-set of Ig superfamily
                     (IgSF) domains; cd05875"
                     /db_xref="CDD:409459"
     Region          40..44
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409459"
     Region          49..53
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409459"
     Region          58..65
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409459"
     Region          71..76
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409459"
     Region          79..81
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409459"
     Region          88..91
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409459"
     Region          96..100
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409459"
     Region          113..121
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409459"
     Region          124..134
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409459"
     Region          143..233
                     /region_name="IgI_2_L1-CAM_like"
                     /note="Second immunoglobulin (Ig)-like domain of the L1
                     cell adhesion molecule (CAM), and similar domains; member
                     of the I-set of Ig superfamily (IgSF) domains; cd05845"
                     /db_xref="CDD:409432"
     Region          143..146
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409432"
     Region          148..152
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409432"
     Region          155..163
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409432"
     Region          170..176
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409432"
     Region          179..182
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409432"
     Region          188..192
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409432"
     Region          194..198
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409432"
     Region          209..217
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409432"
     Region          220..233
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409432"
     Region          251..333
                     /region_name="Ig3_L1-CAM_like"
                     /note="Third immunoglobulin (Ig)-like domain of the L1
                     cell adhesion molecule (CAM), and similar domains;
                     cd05731"
                     /db_xref="CDD:409394"
     Region          263..267
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409394"
     Region          276..280
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409394"
     Region          298..302
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409394"
     Region          312..317
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409394"
     Region          325..328
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409394"
     Region          337..425
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          353..357
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          366..370
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          390..394
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          404..409
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          417..420
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          <449..517
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          460..464
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          483..487
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          497..502
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          510..513
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          527..608
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          538..542
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          553..556
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          574..578
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          588..593
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          601..604
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          627..717
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(627,693,708)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          <688..>869
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Site            order(709..710,712..713)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          827..926
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(915..916,918..919)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          931..1022
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(931,998,1013)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(1014..1015,1017..1018)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          1113..1185
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     Region          1231..1315
                     /region_name="Bravo_FIGEY"
                     /note="Bravo-like intracellular region; pfam13882"
                     /db_xref="CDD:464016"
     CDS             1..1339
                     /gene="NFASC"
                     /coded_by="XM_061159899.1:271..4290"
                     /db_xref="GeneID:133068939"
ORIGIN      
        1 magppppwac tavllcalsl sgaieipmdp siqnelsqpp titkqsvkdh ivdprdnili
       61 eceakgnpap sfhwtrnskf fniakdprvs mrrrsgtlvi dfrsggrpee yegeyqcfar
      121 nkfgtalsnr irlqvskspl wpkenldpvv vqegapltlq cnpppglpsp vifwmsssme
      181 pitqdkrvsq ghngdlyfsn vmlqdmqtdy scnarfhfth tiqqknpfnl kvlttrgvae
      241 rtpsfmypqg tassqmvlrg mdlllecias gvptpdiawy kkggdlpsdk akfenfnkal
      301 ritnvseeds geyfclasnk mgsirhtisv rvkaapywld epknlilapg edgrlvcran
      361 gnpkptvqwm vngeplqsap pnpnrevagd tiifrdtqis sravyqcnts nehgyllana
      421 fvsvldvppr mlsprnqlir vilynrtrld cpffgspipt lrwfkngqgs nldggnyhvy
      481 engsleikmi rkedqgiytc vatnilgkae nqvrlevkdp triyrmpedq vakrgttvql
      541 ecrvkhdpsl klsvswlkdd eplyisnrmk keedsltifg vaerdqgsyt cvasteldqd
      601 lakahltvla dqatptnrla alpkgrpdrp rdleltdlae rsvrltwipg ddnnspitdy
      661 vvqfeedqfq pgvwhdhskf pgsvnsavlr lspyvnyqfr viainevgss hpslpseryr
      721 tsgappesnp sdvkgegsrk nnmeitwtpm natsafgpnl ryivkwrrre treawnnvtv
      781 wgsryvvgqt pvyvpyeirv qaendfgkgp epdtvigysg edypraaptd vkirvlnsta
      841 islqwnrvys dtvqgqlrey rayywressl lknlwvsqkr qqagfpgdrl rgvvsrlfpy
      901 snyklemvvv ngrgdgprse tkefttpegv psaprrfrvr qpnletinle wdhpehpngi
      961 ligytlkyva fngtkvgkqi venfspnqtk ftvqradpvs ryrfslsart qvgsgeavte
     1021 espappneat ptaapptspp ttvgvprtvs stdapataat teattvptvp pvapataaat
     1081 eatataastt ttespaatrt eiresapdeq siwnvtvlsn skwanitwkh nfgpgtdfvv
     1141 eyidsnhtkk tvpvkaqaqp lqltdlypgm tytlriysrd negissavit fmtsaaytnn
     1201 qadiatqgwf iglmcavall vlillivcfi krsrggkypv rekkdvplgp edpkeedgsf
     1261 dysdednkpl qgsqtsldgt ikqqesddsl vdygeggegq fnedgsfigq ytvkkdkeet
     1321 egnesseats pvnaiysla
//
LOCUS       XP_061015883             563 aa            linear   MAM 02-DEC-2023
DEFINITION  retinoblastoma-binding protein 5 isoform X1 [Dama dama].
ACCESSION   XP_061015883
VERSION     XP_061015883.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159900.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..563
                     /product="retinoblastoma-binding protein 5 isoform X1"
                     /calculated_mol_wt=61908
     Region          29..64
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <31..321
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          70..106
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          111..146
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          154..190
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          201..246
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          254..291
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          298..321
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..563
                     /gene="RBBP5"
                     /coded_by="XM_061159900.1:112..1803"
                     /db_xref="GeneID:133068940"
ORIGIN      
        1 mnlellesfg qnypeeadgt ldcismaltc tfnrwgtlla vgcndgrivi wdfltrgiak
       61 iisahihpvc slcwsrdghk lvsastdniv sqwdvlsgdc dqrfrfpspi lkvqyhprdq
      121 nkvlvcpmks apvmltlsds khvvlpvddd sdlnvvasfd rrgeyiytgn akgkilvlkt
      181 dsqdlvasfr vttgtsntta iksiefarkg scflintadr iirvydgrei ltcgrdgepe
      241 pmqklqdlvn rtpwkkccfs gdgeyivags arqhalyiwe ksignlvkil hgtrgellld
      301 vawhpvrpii asissgvvsi waqnqvenws afapdfkeld enveyeeres efdiededks
      361 epeqtgadaa edeevdvtsv dpiaafcssd eeledskall ylpiapeved peenpygppp
      421 davqtslmde gassekkrqs sadgsqppkk kpkttnielq gvpndevhpl lgvkgdgksk
      481 kkqagrpkgs kgkekdspfk pklykgdrgl plegsakgkv qaelsqpltg dtwktnrapv
      541 evtshlesga rkffavkqlv svg
//
LOCUS       XP_061015884             538 aa            linear   MAM 02-DEC-2023
DEFINITION  retinoblastoma-binding protein 5 isoform X2 [Dama dama].
ACCESSION   XP_061015884
VERSION     XP_061015884.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159901.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..538
                     /product="retinoblastoma-binding protein 5 isoform X2"
                     /calculated_mol_wt=59022
     Region          29..64
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <31..321
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          70..106
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          154..190
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          201..246
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          254..291
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          298..321
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..538
                     /gene="RBBP5"
                     /coded_by="XM_061159901.1:112..1728"
                     /db_xref="GeneID:133068940"
ORIGIN      
        1 mnlellesfg qnypeeadgt ldcismaltc tfnrwgtlla vgcndgrivi wdfltrgiak
       61 iisahihpvc slcwsrdghk lvsastdniv sqwdvlsgdc dqrfrfpspi lkvqyhprdq
      121 nkvlvcpmks apvmltlsds khvvlpvddd sdlnvvasfd rrgeyiytgn akgkilvlkt
      181 dsqdlvasfr vttgtsntta iksiefarkg scflintadr iirvydgrei ltcgrdgepe
      241 pmqklqdlvn rtpwkkccfs gdgeyivags arqhalyiwe ksignlvkil hgtrgellld
      301 vawhpvrpii asissgvvsi waqnqvenws afapdfkeld enveyeeres efdiededks
      361 epeqtgadaa edeevdvtsv dpiaafcssd eeledskall ylpiapeved peenpygppp
      421 davqtslmde gassekkrqs sadgsqppkk kpkttnielq gvpndevhpl lgvkgdgksk
      481 kkqagrpkgs kgkekdspfk pklykgdrgl plegsakgkv qaelsqplta ggaisell
//
LOCUS       XP_061015885             538 aa            linear   MAM 02-DEC-2023
DEFINITION  retinoblastoma-binding protein 5 isoform X3 [Dama dama].
ACCESSION   XP_061015885
VERSION     XP_061015885.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159902.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..538
                     /product="retinoblastoma-binding protein 5 isoform X3"
                     /calculated_mol_wt=59137
     Region          4..39
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <6..296
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          45..81
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          86..121
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          129..165
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          176..221
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          229..266
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          273..296
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..538
                     /gene="RBBP5"
                     /coded_by="XM_061159902.1:233..1849"
                     /db_xref="GeneID:133068940"
ORIGIN      
        1 maltctfnrw gtllavgcnd griviwdflt rgiakiisah ihpvcslcws rdghklvsas
       61 tdnivsqwdv lsgdcdqrfr fpspilkvqy hprdqnkvlv cpmksapvml tlsdskhvvl
      121 pvdddsdlnv vasfdrrgey iytgnakgki lvlktdsqdl vasfrvttgt snttaiksie
      181 farkgscfli ntadriirvy dgreiltcgr dgepepmqkl qdlvnrtpwk kccfsgdgey
      241 ivagsarqha lyiweksign lvkilhgtrg ellldvawhp vrpiiasiss gvvsiwaqnq
      301 venwsafapd fkeldenvey eeresefdie dedksepeqt gadaaedeev dvtsvdpiaa
      361 fcssdeeled skallylpia pevedpeenp ygpppdavqt slmdegasse kkrqssadgs
      421 qppkkkpktt nielqgvpnd evhpllgvkg dgkskkkqag rpkgskgkek dspfkpklyk
      481 gdrglplegs akgkvqaels qpltgdtwkt nrapvevtsh lesgarkffa vkqlvsvg
//
LOCUS       XP_061015887             525 aa            linear   MAM 02-DEC-2023
DEFINITION  retinoblastoma-binding protein 5 isoform X4 [Dama dama].
ACCESSION   XP_061015887
VERSION     XP_061015887.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159904.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..525
                     /product="retinoblastoma-binding protein 5 isoform X4"
                     /calculated_mol_wt=57827
     Region          29..64
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <31..321
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          70..106
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          111..146
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          154..190
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          201..246
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          254..291
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          298..321
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <340..510
                     /region_name="PTZ00441"
                     /note="sporozoite surface protein 2 (SSP2); Provisional"
                     /db_xref="CDD:240420"
     CDS             1..525
                     /gene="RBBP5"
                     /coded_by="XM_061159904.1:111..1688"
                     /db_xref="GeneID:133068940"
ORIGIN      
        1 mnlellesfg qnypeeadgt ldcismaltc tfnrwgtlla vgcndgrivi wdfltrgiak
       61 iisahihpvc slcwsrdghk lvsastdniv sqwdvlsgdc dqrfrfpspi lkvqyhprdq
      121 nkvlvcpmks apvmltlsds khvvlpvddd sdlnvvasfd rrgeyiytgn akgkilvlkt
      181 dsqdlvasfr vttgtsntta iksiefarkg scflintadr iirvydgrei ltcgrdgepe
      241 pmqklqdlvn rtpwkkccfs gdgeyivags arqhalyiwe ksignlvkil hgtrgellld
      301 vawhpvrpii asissgvvsi waqnqvenws afapdfkeld enveyeeres efdiededks
      361 epeqtgadaa edeevdvtsv dpiaafcssd eeledskall ylpiapeved peenpygppp
      421 davqtslmde gassekkrqs sadgsqppkk kpkttnielq gvpndevhpl lgvkgdgksk
      481 kkqagrpkgs kgdtwktnra pvevtshles garkffavkq lvsvg
//
LOCUS       XP_061015888             500 aa            linear   MAM 02-DEC-2023
DEFINITION  retinoblastoma-binding protein 5 isoform X5 [Dama dama].
ACCESSION   XP_061015888
VERSION     XP_061015888.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159905.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..500
                     /product="retinoblastoma-binding protein 5 isoform X5"
                     /calculated_mol_wt=54941
     Region          29..64
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <31..321
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          70..106
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          111..146
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          154..190
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          201..246
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          254..291
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          298..321
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..500
                     /gene="RBBP5"
                     /coded_by="XM_061159905.1:112..1614"
                     /db_xref="GeneID:133068940"
ORIGIN      
        1 mnlellesfg qnypeeadgt ldcismaltc tfnrwgtlla vgcndgrivi wdfltrgiak
       61 iisahihpvc slcwsrdghk lvsastdniv sqwdvlsgdc dqrfrfpspi lkvqyhprdq
      121 nkvlvcpmks apvmltlsds khvvlpvddd sdlnvvasfd rrgeyiytgn akgkilvlkt
      181 dsqdlvasfr vttgtsntta iksiefarkg scflintadr iirvydgrei ltcgrdgepe
      241 pmqklqdlvn rtpwkkccfs gdgeyivags arqhalyiwe ksignlvkil hgtrgellld
      301 vawhpvrpii asissgvvsi waqnqvenws afapdfkeld enveyeeres efdiededks
      361 epeqtgadaa edeevdvtsv dpiaafcssd eeledskall ylpiapeved peenpygppp
      421 davqtslmde gassekkrqs sadgsqppkk kpkttnielq gvpndevhpl lgvkgdgksk
      481 kkqagrpkgs kaggaisell
//
LOCUS       XP_061015889             276 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane protein 81 [Dama dama].
ACCESSION   XP_061015889
VERSION     XP_061015889.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159906.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..276
                     /product="transmembrane protein 81"
                     /calculated_mol_wt=30241
     Region          100..163
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cd00096"
                     /db_xref="CDD:409353"
     Region          100..104
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          118..122
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          143..147
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          157..162
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..276
                     /gene="TMEM81"
                     /coded_by="XM_061159906.1:1339..2169"
                     /db_xref="GeneID:133068941"
ORIGIN      
        1 mktlatsfil gslvlafclp lvvtlpktla ipeklqeavg kvvvnattct vtcglgfkee
       61 tvcevgpdgv rrkcksqrle cltswvcgml hftvligkef klsclspdil eigqeafrft
      121 wrlargiist ddevfkpfqa ssyfikfqsi qeydsgtyrc dvqllknlrl vkrlyfglrv
      181 lppnlvnlnf hqsltehqkl vdeglevsld nysrpqpppw rkkvavavgv gvaggvtagv
      241 lvstalcgrl raahssssle tlqpllpkgg mlrtpd
//
LOCUS       XP_061015890             928 aa            linear   MAM 02-DEC-2023
DEFINITION  dual serine/threonine and tyrosine protein kinase [Dama dama].
ACCESSION   XP_061015890
VERSION     XP_061015890.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159907.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..928
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..928
                     /product="dual serine/threonine and tyrosine protein
                     kinase"
                     /calculated_mol_wt=104613
     Region          650..911
                     /region_name="PKc_Dusty"
                     /note="Catalytic domain of the Dual-specificity Protein
                     Kinase, Dusty; cd13975"
                     /db_xref="CDD:270877"
     Site            order(657..661,665,678,680,710,733..736,739,741,776,778,
                     780..781,783,794,797,810..813)
                     /site_type="active"
                     /db_xref="CDD:270877"
     Site            order(657..661,665,678,680,710,733..736,739,776,778,
                     780..781,783,794)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270877"
     Site            order(661,739,741,776,778,780,797,810..813)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270877"
     Site            793..813
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270877"
     CDS             1..928
                     /gene="DSTYK"
                     /coded_by="XM_061159907.1:68..2854"
                     /db_xref="GeneID:133068942"
ORIGIN      
        1 megdwvpwgs epesgpgpgg gggirelcrg fgryrrylgr lrqnlrdtqk ffrdlrgsqp
       61 rdclsspaeg geagrgpagd vagtglpagq lscisfppke ekrlqqmvdc lpcvlilgqd
      121 cnvkcqllnl llgvqvlpts klggencklr rlrftygtqt rvslalpgqy elvhtlvahq
      181 gdwetipeed levqedseda ahvlaelevt mrhallqevd ivvapcqglr pavdvlgdlm
      241 ndflpvitya lhkdelserd eqelqeirky fsfpifffkv pkpgseitds stermesers
      301 plhrqltdlg ylssshcnca apgqdtkaqs mlvehggklr hlntfshqvl qarlvdaaka
      361 lnlvhcrcld ifinqafdmq rdlqitpkrl eytrkkenel yeslmnianr kqeemkdmiv
      421 etlnamkeel lddaanmefk dvivpengep vgtreikcci rqiqeliisr lnqavankli
      481 ssvdylresf vgtlerclqs leksqdvsvh itsnylkqil naayhvevtf hsgssvtrml
      541 weqikqiiqr itwvsppait lewkrkvaqe aieslsaskl aksicsqfrt rlnssheafa
      601 aslrqleagh sgrlektedl wlkvrkdhap rlarlslesr slqdvllhrk pklgqelgrg
      661 qygvvylcdn wgghfpcalk svvppdekhw ndlalefhym rslpkherlv dlhgsvidys
      721 ygggssiavl limerlhrdl ytglkaglal etrlqialdv vegirflhsq glvhrdvklk
      781 nvlldkqnra kitdlgfckp eammsgsivg tpihmapelf tgkydnsvdv yafgilfwyi
      841 csgsvklpea fercaskdhl wnnvrrgarp erlpvfdeec wqlmeacwdg dpsqrpllgi
      901 vqpmlqgimd rlckshserp nrglddst
//
LOCUS       XP_061015891             704 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane and coiled-coil domains protein 2 isoform X1 [Dama
            dama].
ACCESSION   XP_061015891
VERSION     XP_061015891.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159908.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..704
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..704
                     /product="transmembrane and coiled-coil domains protein 2
                     isoform X1"
                     /calculated_mol_wt=76153
     Region          279..690
                     /region_name="Tmemb_cc2"
                     /note="Predicted transmembrane and coiled-coil 2 protein;
                     pfam10267"
                     /db_xref="CDD:463036"
     CDS             1..704
                     /gene="TMCC2"
                     /coded_by="XM_061159908.1:404..2518"
                     /db_xref="GeneID:133068943"
ORIGIN      
        1 mkrcksdelq qqqgeedgag ledatchlpg adlrpgeaag ansaggptsd agaaaapnpg
       61 prskppdlkk iqqlsegsmf ghglkhlfhs rrrsrerehp ssqdpqqqqq qgmsdhespd
      121 ekerspemhr vsyamslhdl parptafnrv lqqirarpsi krgaslhggg gggsrrakss
      181 slepqrgsph llrkapqdsg laailhqhqg rprsssttdt alllpdggsl laeeaeglgd
      241 kvdkgdfval nlaggpghgd adgpisldvp dgapdpqrtk aaiehlhqki lkiteqikie
      301 qearddnvae ylklannadk qqasrikqvf ekknqksaqt iaqlhkkleh yrrrlreieq
      361 ngpsrqpkdv lrdmqqglkd vganvragis gfgggvvegv kgslsglsqa thsavvskpr
      421 efaslirnkf gsadniahlk dplddgppee aaralsgsat lvsspkyasd decssasass
      481 agagsnsgag paaaapgspk sgplygapgn vdavleelre ikegqshled smedlkaqlq
      541 rdytymtqcl qeeryryerl eeqlndltel hqnemtnlkq elasmeekva yqsyerardi
      601 qeavescltr vtklelqqqq qqvvqlegve nanarallgk finvilalma vllvfvstva
      661 sfitplvktr lrvsstalla lvllllwkhw dsltyllehv llps
//
LOCUS       XP_061015892             477 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane and coiled-coil domains protein 2 isoform X2 [Dama
            dama].
ACCESSION   XP_061015892
VERSION     XP_061015892.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159909.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..477
                     /product="transmembrane and coiled-coil domains protein 2
                     isoform X2"
                     /calculated_mol_wt=51994
     Region          52..463
                     /region_name="Tmemb_cc2"
                     /note="Predicted transmembrane and coiled-coil 2 protein;
                     pfam10267"
                     /db_xref="CDD:463036"
     CDS             1..477
                     /gene="TMCC2"
                     /coded_by="XM_061159909.1:434..1867"
                     /db_xref="GeneID:133068943"
ORIGIN      
        1 mkrkrllttp gsgkvdkgdf valnlaggpg hgdadgpisl dvpdgapdpq rtkaaiehlh
       61 qkilkiteqi kieqearddn vaeylklann adkqqasrik qvfekknqks aqtiaqlhkk
      121 lehyrrrlre ieqngpsrqp kdvlrdmqqg lkdvganvra gisgfgggvv egvkgslsgl
      181 sqathsavvs kprefaslir nkfgsadnia hlkdplddgp peeaaralsg satlvsspky
      241 asddecssas assagagsns gagpaaaapg spksgplyga pgnvdavlee lreikegqsh
      301 ledsmedlka qlqrdytymt qclqeeryry erleeqlndl telhqnemtn lkqelasmee
      361 kvayqsyera rdiqeavesc ltrvtklelq qqqqqvvqle gvenanaral lgkfinvila
      421 lmavllvfvs tvasfitplv ktrlrvssta llalvllllw khwdsltyll ehvllps
//
LOCUS       XP_061015893             472 aa            linear   MAM 02-DEC-2023
DEFINITION  transmembrane and coiled-coil domains protein 2 isoform X3 [Dama
            dama].
ACCESSION   XP_061015893
VERSION     XP_061015893.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159910.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..472
                     /product="transmembrane and coiled-coil domains protein 2
                     isoform X3"
                     /calculated_mol_wt=51500
     Region          47..458
                     /region_name="Tmemb_cc2"
                     /note="Predicted transmembrane and coiled-coil 2 protein;
                     pfam10267"
                     /db_xref="CDD:463036"
     CDS             1..472
                     /gene="TMCC2"
                     /coded_by="XM_061159910.1:166..1584"
                     /db_xref="GeneID:133068943"
ORIGIN      
        1 mkskeeekav dkgdfvalnl aggpghgdad gpisldvpdg apdpqrtkaa iehlhqkilk
       61 iteqikieqe arddnvaeyl klannadkqq asrikqvfek knqksaqtia qlhkklehyr
      121 rrlreieqng psrqpkdvlr dmqqglkdvg anvragisgf gggvvegvkg slsglsqath
      181 savvskpref aslirnkfgs adniahlkdp lddgppeeaa ralsgsatlv sspkyasdde
      241 cssasassag agsnsgagpa aaapgspksg plygapgnvd avleelreik egqshledsm
      301 edlkaqlqrd ytymtqclqe eryryerlee qlndltelhq nemtnlkqel asmeekvayq
      361 syerardiqe avescltrvt klelqqqqqq vvqlegvena narallgkfi nvilalmavl
      421 lvfvstvasf itplvktrlr vsstallalv llllwkhwds ltyllehvll ps
//
LOCUS       XP_061015894             633 aa            linear   MAM 02-DEC-2023
DEFINITION  NUAK family SNF1-like kinase 2 [Dama dama].
ACCESSION   XP_061015894
VERSION     XP_061015894.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159911.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..633
                     /product="NUAK family SNF1-like kinase 2"
                     /calculated_mol_wt=69160
     Region          54..308
                     /region_name="STKc_NUAK2"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     novel (nua) kinase family NUAK 2; cd14161"
                     /db_xref="CDD:271063"
     Site            order(64..68,72,84,86,118,134..137,141,143..144,146,
                     179..180,182,184..185,187,197..198,201,214..219,221,
                     251..254,256)
                     /site_type="active"
                     /db_xref="CDD:271063"
     Site            order(64..67,72,84,86,118,134..137,141,184..185,187,
                     197..198)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271063"
     Site            order(141,143..144,146,180,182,184,201,214..219,221,
                     251..254,256)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271063"
     Site            197..219
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271063"
     CDS             1..633
                     /gene="NUAK2"
                     /coded_by="XM_061159911.1:124..2025"
                     /db_xref="GeneID:133068944"
ORIGIN      
        1 meslpfprrl gpapsataal aaelvrplad gllkspkplm kkqavkrhhh khnlrhryef
       61 letlgkgtyg kvkkaressg rlvaiksirk dkikdeqdlm hirreieims slnhphiiai
      121 hevfensgri vivmeyasrg dlydhiserq rlserearhf frqivsavqy chqngvvhrd
      181 lklenillda ngnikiadfg lsnlyhqgkf lqtfcgsply aspeivngkp ytgpevdsws
      241 lgvllyilvh gsmpfdgqdh ktlvkqisng ayrqppkpsd acglirwllm vnptrratle
      301 dvashwwvnw gyatrvgeqg aphegghpgs dpgrasvaqw lrrssrplle ngakvcsflk
      361 qqapggrgla pglerqhslk ksrkenamaq tlqgapaada sprpgkgglk lpkgilkkkt
      421 snptegared pepgpspanp gqagpllpkk gilkkarqre sgyysspeps esgelldagd
      481 vfvsgdtvep kpppasgrlp hrkgilkhng kfshaaleht apatfgslde ltsphppara
      541 srpsgavsed silssesfdq ldlpkrlpep plrgcvsvdd lmgleappse gpgsrglrrw
      601 rqdslgtscf slldcpegte gcqqglrvcs els
//
LOCUS       XP_061015896             471 aa            linear   MAM 02-DEC-2023
DEFINITION  cyclin-dependent kinase 18 [Dama dama].
ACCESSION   XP_061015896
VERSION     XP_061015896.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159913.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..471
                     /product="cyclin-dependent kinase 18"
                     /calculated_mol_wt=53961
     Region          135..422
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(147..150,153,155,168,170,200,216..219,262,266..267,
                     269,279..280)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..471
                     /gene="CDK18"
                     /coded_by="XM_061159913.1:67..1482"
                     /db_xref="GeneID:133068945"
ORIGIN      
        1 mnkmknfkrr fslsvprtet ieeslaefte qfnqlhnrrn edlqlgplgg dtqpesstfs
       61 ptdsgedrgq pspgvqyrrq nqrrfsmedi skrlslpmdi rlpqeflqkl qlespdlpkp
      121 ltrmsrrasl sdigfgklet yvkldklgeg tyatvfkgrs kltenlvalk eirleheega
      181 pctairevsl lrnlkhaniv tlhdlvhter sltlvfeyld rdlkqyldhc gnlmsmhnvk
      241 ifmfqllrgl aychrrkilh rdlkpqnlli nergelklad fglaraksvp tktysnevvt
      301 lwyrppdvll gsteystpld mwgvgcihye matgrplfpg stvkeelhli frllgtptee
      361 twpgvtalse fraynfpryl pqpllshapr ldpdginlls glllyesksr vsaeaalrhp
      421 yfrslgervh qledtaslfs lkeiqlqkdp gyrglafqqp grgknrrqsi f
//
LOCUS       XP_061015897             471 aa            linear   MAM 02-DEC-2023
DEFINITION  cyclin-dependent kinase 18 [Dama dama].
ACCESSION   XP_061015897
VERSION     XP_061015897.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159914.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..471
                     /product="cyclin-dependent kinase 18"
                     /calculated_mol_wt=53961
     Region          135..422
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(147..150,153,155,168,170,200,216..219,262,266..267,
                     269,279..280)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..471
                     /gene="CDK18"
                     /coded_by="XM_061159914.1:94..1509"
                     /db_xref="GeneID:133068945"
ORIGIN      
        1 mnkmknfkrr fslsvprtet ieeslaefte qfnqlhnrrn edlqlgplgg dtqpesstfs
       61 ptdsgedrgq pspgvqyrrq nqrrfsmedi skrlslpmdi rlpqeflqkl qlespdlpkp
      121 ltrmsrrasl sdigfgklet yvkldklgeg tyatvfkgrs kltenlvalk eirleheega
      181 pctairevsl lrnlkhaniv tlhdlvhter sltlvfeyld rdlkqyldhc gnlmsmhnvk
      241 ifmfqllrgl aychrrkilh rdlkpqnlli nergelklad fglaraksvp tktysnevvt
      301 lwyrppdvll gsteystpld mwgvgcihye matgrplfpg stvkeelhli frllgtptee
      361 twpgvtalse fraynfpryl pqpllshapr ldpdginlls glllyesksr vsaeaalrhp
      421 yfrslgervh qledtaslfs lkeiqlqkdp gyrglafqqp grgknrrqsi f
//
LOCUS       XP_061015898             512 aa            linear   MAM 02-DEC-2023
DEFINITION  major facilitator superfamily domain-containing protein 4A [Dama
            dama].
ACCESSION   XP_061015898
VERSION     XP_061015898.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159915.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..512
                     /product="major facilitator superfamily domain-containing
                     protein 4A"
                     /calculated_mol_wt=55527
     Region          18..481
                     /region_name="MFS_MFSD4A"
                     /note="Major facilitator superfamily domain-containing
                     protein 4A; cd17453"
                     /db_xref="CDD:341011"
     Site            order(28..29,32..33,36,68,119..120,122..124,127,146,
                     149..150,153,316,319..320,323..325,328,357,361,411..412,
                     416,420,435,438..439,442..443,446)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:341011"
     CDS             1..512
                     /gene="MFSD4A"
                     /coded_by="XM_061159915.1:1..1539"
                     /db_xref="GeneID:133068946"
ORIGIN      
        1 mgcdvrvsgl lrrnlqptlt ywsvffsfgl ciaflgptll dlrcqtrssl peiswvffsq
       61 qlclllgsal ggvfkrtlaq slwalfassl aislvfatip fcrdvkvlas vmalaglamg
      121 cidtvanmql vriyqkdsav flqvlhffvg fgallsplia dpflseascl panstanats
      181 gshlfhasrv lsrqhpeaqp wpnrtlpglp sqdgagtrvs yafwimalin lpvplavlyl
      241 lskerllacc pqrrplllsa deltletqpp ekedvsslsp kfhpghedlf sccqrknfrg
      301 vpssffaihi taalvlfmtd gltgaysafv ysyavekpls vghkvagylp slfwgfitlg
      361 rlisipvssr vkpatmvfin vvgvvvtflv llvfshnvaf lfvgtaslgl slsstfpsml
      421 aytedalqyr gcattvlvtg agvgemvlqm lvgsifqaqg sysflvcgvi fgglaftfyi
      481 lllffhrmhp glssgpttdr algmeslesy qr
//
LOCUS       XP_061015899             431 aa            linear   MAM 02-DEC-2023
DEFINITION  ETS domain-containing protein Elk-4 [Dama dama].
ACCESSION   XP_061015899
VERSION     XP_061015899.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159916.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..431
                     /product="ETS domain-containing protein Elk-4"
                     /calculated_mol_wt=46416
     Region          5..88
                     /region_name="ETS"
                     /note="erythroblast transformation specific domain;
                     smart00413"
                     /db_xref="CDD:197710"
     Region          <172..369
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..431
                     /gene="ELK4"
                     /coded_by="XM_061159916.1:169..1464"
                     /db_xref="GeneID:133068948"
ORIGIN      
        1 mdsaitlwqf llqllkepqn dhmicwtsdn gefkllqaee varlwgirkn kpnmnydkls
       61 ralryyyvkn iikkvngqkf vykfvsypei lnmdpmtvgr vegecealsl selssssskd
      121 venggkekpp qpgaktssrn dyihsglyss ftlnslnssn rklfksikve npaeklaekk
      181 spqeptpsvi kfvttpskkp pveppaasis agpgispsse etiqaletla sprlpsleap
      241 tsasgvtapv tttppvssvs plqepprtps pplssnpdmd tdmesvasqs mqlpenlsle
      301 pkdqdsalqe kdktnssrsk kpkglelapt lvitgsdpsp lgilspslpt asltpalfsq
      361 tpilltpspl lssihfwstl spvaplspar lqgantlfqf psvlnshgpf tlsgldgpst
      421 pgpfspdlqk t
//
LOCUS       XP_061015900             550 aa            linear   MAM 02-DEC-2023
DEFINITION  solute carrier family 45 member 3 [Dama dama].
ACCESSION   XP_061015900
VERSION     XP_061015900.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159917.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..550
                     /product="solute carrier family 45 member 3"
                     /calculated_mol_wt=58706
     Region          18..534
                     /region_name="MFS_SLC45_SUC"
                     /note="Solute carrier family 45 and similar sugar
                     transporters of the Major Facilitator Superfamily of
                     transporters; cd17313"
                     /db_xref="CDD:340871"
     Site            order(28..29,32..33,36,68,136..137,139..141,144,165,
                     168..169,172,277,280..281,284..286,289,334,338,387..388,
                     392,396,489,492..493,496..497,500)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340871"
     CDS             1..550
                     /gene="SLC45A3"
                     /coded_by="XM_061159917.1:297..1949"
                     /db_xref="GeneID:133068949"
ORIGIN      
        1 mlqrlwasrl lrhrkaqlll vnlltfglev claagityvp plllevgvee kfmtmvlgig
       61 pvlglvsvpl lgsasdhwrg rygrrrpfiw alslgvllsl fliprasrla gllcpdtrpl
      121 elallilgvg llaycgqlcf tpleallsdl frdpdhcrqa fsvyafmigl ggclgyllpa
      181 idwdasalap ylgtqeeclf gllalifltc vaatafvaee aalgptepve glsapsvppc
      241 cpcrarlalr slgtlcprlr rlccrmpral rrlfmaelcs wmafmtftlf ytdfvgegly
      301 qgvpgaepgt earrhydegv rmgslglflq caisllfslv mdrlvqrfgt ravylasvva
      361 fpvaagatcl srslavvtas aaltgvtfsa lqilpytlas lyhrekqvfl pkyrgddggg
      421 agedgvmtsf lpgpkaaapf phghggpggl laappalcga sacdssvrav vaepqearav
      481 pgrgicldla ildsafllsq vapslfmgfi vqlsqsvtay mvsaaglglv aiyfvtqvvf
      541 dkndlakysv
//
LOCUS       XP_061015901             550 aa            linear   MAM 02-DEC-2023
DEFINITION  solute carrier family 45 member 3 [Dama dama].
ACCESSION   XP_061015901
VERSION     XP_061015901.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159918.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..550
                     /product="solute carrier family 45 member 3"
                     /calculated_mol_wt=58706
     Region          18..534
                     /region_name="MFS_SLC45_SUC"
                     /note="Solute carrier family 45 and similar sugar
                     transporters of the Major Facilitator Superfamily of
                     transporters; cd17313"
                     /db_xref="CDD:340871"
     Site            order(28..29,32..33,36,68,136..137,139..141,144,165,
                     168..169,172,277,280..281,284..286,289,334,338,387..388,
                     392,396,489,492..493,496..497,500)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340871"
     CDS             1..550
                     /gene="SLC45A3"
                     /coded_by="XM_061159918.1:324..1976"
                     /db_xref="GeneID:133068949"
ORIGIN      
        1 mlqrlwasrl lrhrkaqlll vnlltfglev claagityvp plllevgvee kfmtmvlgig
       61 pvlglvsvpl lgsasdhwrg rygrrrpfiw alslgvllsl fliprasrla gllcpdtrpl
      121 elallilgvg llaycgqlcf tpleallsdl frdpdhcrqa fsvyafmigl ggclgyllpa
      181 idwdasalap ylgtqeeclf gllalifltc vaatafvaee aalgptepve glsapsvppc
      241 cpcrarlalr slgtlcprlr rlccrmpral rrlfmaelcs wmafmtftlf ytdfvgegly
      301 qgvpgaepgt earrhydegv rmgslglflq caisllfslv mdrlvqrfgt ravylasvva
      361 fpvaagatcl srslavvtas aaltgvtfsa lqilpytlas lyhrekqvfl pkyrgddggg
      421 agedgvmtsf lpgpkaaapf phghggpggl laappalcga sacdssvrav vaepqearav
      481 pgrgicldla ildsafllsq vapslfmgfi vqlsqsvtay mvsaaglglv aiyfvtqvvf
      541 dkndlakysv
//
LOCUS       XP_061015902             243 aa            linear   MAM 02-DEC-2023
DEFINITION  nuclear ubiquitous casein and cyclin-dependent kinase substrate 1
            isoform X1 [Dama dama].
ACCESSION   XP_061015902
VERSION     XP_061015902.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159919.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..243
                     /product="nuclear ubiquitous casein and cyclin-dependent
                     kinase substrate 1 isoform X1"
                     /calculated_mol_wt=27194
     Region          <35..237
                     /region_name="PTZ00108"
                     /note="DNA topoisomerase 2-like protein; Provisional"
                     /db_xref="CDD:240271"
     CDS             1..243
                     /gene="NUCKS1"
                     /coded_by="XM_061159919.1:217..948"
                     /db_xref="GeneID:133068951"
ORIGIN      
        1 msrpvrnrkv vdysqfqesd dadedygrds gppakkirss preaknkrrs gknsqedsed
       61 seekdvktkk ddshsaedse dekedhknvr qqrqaaskaa skqremlmed vgseeeqeee
      121 detpfqekds gsdedflved dddsdygssk kknkkmvkks kperkekkmp kprlkatvtp
      181 spvkgkgkvg rptaskaske ktpspkeede epesplekkt ssspppeksg degseeeaqs
      241 ged
//
LOCUS       XP_061015903             242 aa            linear   MAM 02-DEC-2023
DEFINITION  nuclear ubiquitous casein and cyclin-dependent kinase substrate 1
            isoform X2 [Dama dama].
ACCESSION   XP_061015903
VERSION     XP_061015903.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159920.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..242
                     /product="nuclear ubiquitous casein and cyclin-dependent
                     kinase substrate 1 isoform X2"
                     /calculated_mol_wt=27065
     Region          <35..236
                     /region_name="PTZ00108"
                     /note="DNA topoisomerase 2-like protein; Provisional"
                     /db_xref="CDD:240271"
     CDS             1..242
                     /gene="NUCKS1"
                     /coded_by="XM_061159920.1:220..948"
                     /db_xref="GeneID:133068951"
ORIGIN      
        1 msrpvrnrkv vdysqfqesd dadedygrds gppakkirss preaknkrrs gknsqedsed
       61 seekdvktkk ddshsaedse dekedhknvr qqrqaaskaa skqremlmed vgseeeqeee
      121 detpfqensg sdedflvedd ddsdygsskk knkkmvkksk perkekkmpk prlkatvtps
      181 pvkgkgkvgr ptaskaskek tpspkeedee pesplekkts sspppeksgd egseeeaqsg
      241 ed
//
LOCUS       XP_061015904             341 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-related protein Rab-7L1 isoform X1 [Dama dama].
ACCESSION   XP_061015904
VERSION     XP_061015904.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159921.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..341
                     /product="ras-related protein Rab-7L1 isoform X1"
                     /calculated_mol_wt=39206
     Region          67..286
                     /region_name="RT_nLTR_like"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; cd01650"
                     /db_xref="CDD:238827"
     Site            order(121..126,180..181,221,223..224,282..283)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238827"
     Site            order(121..126,180,223)
                     /site_type="other"
                     /note="putative NTP binding site [chemical binding]"
                     /db_xref="CDD:238827"
     Site            181
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:238827"
     CDS             1..341
                     /gene="RAB29"
                     /coded_by="XM_061159921.1:2278..3303"
                     /db_xref="GeneID:133068952"
ORIGIN      
        1 mtkimsskcs dchlilnisf lvckyrnfkk lffsiivyhk tlnsflyytv rpcflfyick
       61 yrdfmlkilq vrlqqyvnre lpdiqagfrq grgtrdqian ipwiiekare fqkniyfcfi
      121 dyakafncvd hnklwkilke mgipdhltcl lrnlyagqea tvrtghgttd wfqigkgvrq
      181 gcilspclfn lyaeyimrna gleeaqagik iagrninnfr yaddttlmae sedelksllm
      241 kvkeesekvg lklniqktki masgpitswq idgqtvsdfi flgskitadg dcsheikrhl
      301 llgrkfmtnl dsilksrdit lpkqkgpssq gygfssghvw m
//
LOCUS       XP_061015905             337 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-related protein Rab-7L1 isoform X2 [Dama dama].
ACCESSION   XP_061015905
VERSION     XP_061015905.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159922.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..337
                     /product="ras-related protein Rab-7L1 isoform X2"
                     /calculated_mol_wt=38769
     Region          63..282
                     /region_name="RT_nLTR_like"
                     /note="RT_nLTR: Non-LTR (long terminal repeat)
                     retrotransposon and non-LTR retrovirus reverse
                     transcriptase (RT). This subfamily contains both non-LTR
                     retrotransposons and non-LTR retrovirus RTs. RTs catalyze
                     the conversion of single-stranded RNA into...; cd01650"
                     /db_xref="CDD:238827"
     Site            order(117..122,176..177,217,219..220,278..279)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238827"
     Site            order(117..122,176,219)
                     /site_type="other"
                     /note="putative NTP binding site [chemical binding]"
                     /db_xref="CDD:238827"
     Site            177
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:238827"
     CDS             1..337
                     /gene="RAB29"
                     /coded_by="XM_061159922.1:3503..4516"
                     /db_xref="GeneID:133068952"
ORIGIN      
        1 mgcqpfvlfr sstdwmspty iresnlpygi yqfyhktlns flyytvrpcf lfyickyrdf
       61 mlkilqvrlq qyvnrelpdi qagfrqgrgt rdqianipwi iekarefqkn iyfcfidyak
      121 afncvdhnkl wkilkemgip dhltcllrnl yagqeatvrt ghgttdwfqi gkgvrqgcil
      181 spclfnlyae yimrnaglee aqagikiagr ninnfryadd ttlmaesede lksllmkvke
      241 esekvglkln iqktkimasg pitswqidgq tvsdfiflgs kitadgdcsh eikrhlllgr
      301 kfmtnldsil ksrditlpkq kgpssqgygf ssghvwm
//
LOCUS       XP_061015907             203 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-related protein Rab-7L1 isoform X3 [Dama dama].
ACCESSION   XP_061015907
VERSION     XP_061015907.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159924.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..203
                     /product="ras-related protein Rab-7L1 isoform X3"
                     /calculated_mol_wt=22976
     Region          8..203
                     /region_name="Rab32_Rab38"
                     /note="Rab GTPase families 18 (Rab18) and 32 (Rab32);
                     cd04107"
                     /db_xref="CDD:206692"
     Site            8..9
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206692"
     Site            14..21
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206692"
     Site            order(16..22,32..33,38..39,66,125..126,128,155..157)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206692"
     Site            order(22..33,37..38)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206692"
     Site            order(32,37..45)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206692"
     Site            order(37,41..48,56,58)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206692"
     Site            39
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206692"
     Site            order(40,42..44,60,62,69..70,73,77,79..82,173)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206692"
     Site            order(40..41,43,62..63,70,72,74..76)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206692"
     Site            40..44
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206692"
     Site            58..62
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206692"
     Site            63..66
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206692"
     Site            order(66,68..78)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206692"
     Site            69..74
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206692"
     Site            77..81
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206692"
     Site            86..91
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206692"
     Site            118..122
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206692"
     Site            125..128
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206692"
     Site            155..157
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206692"
     Site            171..173
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206692"
     Site            201..203
                     /site_type="other"
                     /note="putative lipid modification site [posttranslational
                     modification]"
                     /db_xref="CDD:206692"
     CDS             1..203
                     /gene="RAB29"
                     /coded_by="XM_061159924.1:347..958"
                     /db_xref="GeneID:133068952"
ORIGIN      
        1 mssrdhlfkv lvvgdaavgk tslvqrysqd sfskhykstv gvdfalkvlq wsdsemvrlq
       61 lwdiagqerf tsmtrlyyrd asacvimfdv tnattfrnsq kwkqdldskl tlpngepvpc
      121 lllankcdls pwavsrdqvd rfskengftg wtetsvkenk nineamrvli ekmmsnsred
      181 mslstqgnyi nlqtkpsssw acc
//
LOCUS       XP_061015908             203 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-related protein Rab-7L1 isoform X3 [Dama dama].
ACCESSION   XP_061015908
VERSION     XP_061015908.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159925.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..203
                     /product="ras-related protein Rab-7L1 isoform X3"
                     /calculated_mol_wt=22976
     Region          8..203
                     /region_name="Rab32_Rab38"
                     /note="Rab GTPase families 18 (Rab18) and 32 (Rab32);
                     cd04107"
                     /db_xref="CDD:206692"
     Site            8..9
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206692"
     Site            14..21
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206692"
     Site            order(16..22,32..33,38..39,66,125..126,128,155..157)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206692"
     Site            order(22..33,37..38)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206692"
     Site            order(32,37..45)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206692"
     Site            order(37,41..48,56,58)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206692"
     Site            39
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206692"
     Site            order(40,42..44,60,62,69..70,73,77,79..82,173)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206692"
     Site            order(40..41,43,62..63,70,72,74..76)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206692"
     Site            40..44
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206692"
     Site            58..62
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206692"
     Site            63..66
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206692"
     Site            order(66,68..78)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206692"
     Site            69..74
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206692"
     Site            77..81
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206692"
     Site            86..91
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206692"
     Site            118..122
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206692"
     Site            125..128
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206692"
     Site            155..157
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206692"
     Site            171..173
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206692"
     Site            201..203
                     /site_type="other"
                     /note="putative lipid modification site [posttranslational
                     modification]"
                     /db_xref="CDD:206692"
     CDS             1..203
                     /gene="RAB29"
                     /coded_by="XM_061159925.1:289..900"
                     /db_xref="GeneID:133068952"
ORIGIN      
        1 mssrdhlfkv lvvgdaavgk tslvqrysqd sfskhykstv gvdfalkvlq wsdsemvrlq
       61 lwdiagqerf tsmtrlyyrd asacvimfdv tnattfrnsq kwkqdldskl tlpngepvpc
      121 lllankcdls pwavsrdqvd rfskengftg wtetsvkenk nineamrvli ekmmsnsred
      181 mslstqgnyi nlqtkpsssw acc
//
LOCUS       XP_061015909             514 aa            linear   MAM 02-DEC-2023
DEFINITION  solute carrier family 41 member 1 [Dama dama].
ACCESSION   XP_061015909
VERSION     XP_061015909.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159926.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..514
                     /product="solute carrier family 41 member 1"
                     /calculated_mol_wt=54733
     Region          140..274
                     /region_name="MgtE"
                     /note="Divalent cation transporter; pfam01769"
                     /db_xref="CDD:460317"
     Region          354..484
                     /region_name="MgtE"
                     /note="Divalent cation transporter; pfam01769"
                     /db_xref="CDD:460317"
     CDS             1..514
                     /gene="SLC41A1"
                     /coded_by="XM_061159926.1:1016..2560"
                     /db_xref="GeneID:133068953"
ORIGIN      
        1 msskpepkdt hqlngtgpaa sacssegpsr eplagtsefl gpdgaevevv lpesranakg
       61 lreedallen gsqsnesddv stdhgpaaps plketsfsig lqvlfpflla gfgtvaagmv
      121 ldivqhwevf qkvtevfilv pallglkgnl emtlasrlst aanighmdtp telwrmitgn
      181 maliqvqatv vgflasiaav vfgwipdghf siphafllca ssvatasias lvlgmimigv
      241 iigsrkigin pdnvatpiaa slgdlitlal lsgiswglyl eqgiwqyiyp lvcaffvall
      301 pvwvmlarrs patrevlysg wepviiamai ssvgglildk tvsdpnfagm avftpvingv
      361 ggnlvavqas ristflhmng tpgenseqap rrcpspcttf fspdvnsrsa rvlfllvvpg
      421 hlvflytisc mqgghttltl ifiifymtaa llqvlillyi adwmvhwmwg rgldpdnfsi
      481 pyltalgdll gtgllalsfh vlwligdrdt dvgd
//
LOCUS       XP_061015910             503 aa            linear   MAM 02-DEC-2023
DEFINITION  N-fatty-acyl-amino acid synthase/hydrolase PM20D1 [Dama dama].
ACCESSION   XP_061015910
VERSION     XP_061015910.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159927.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..503
                     /product="N-fatty-acyl-amino acid synthase/hydrolase
                     PM20D1"
                     /calculated_mol_wt=55613
     Region          53..488
                     /region_name="M20_yscS"
                     /note="M20 Peptidase, carboxypeptidase yscS; cd05674"
                     /db_xref="CDD:349923"
     CDS             1..503
                     /gene="PM20D1"
                     /coded_by="XM_061159927.1:92..1603"
                     /db_xref="GeneID:133068955"
ORIGIN      
        1 marpsvclla slsalllgia avsrskglrg tesqkelrip sqfsqeqria mkealkgaiq
       61 iptvsfspke lnttalaefg eyirkvfptv fhtsfirhev ignyshlftv kgsdpsmqpy
      121 mllahidvvp apdrgwdvpp fsglerdgfi ygrgtldnkn slmailqale lllirsyipr
      181 rsffialghd eevsgvngaq kisallqarg vqlaflvdeg sfildgffpn lkkpfamvsv
      241 sekgainlml qvnmtpghss appketsigi laaavsrleq tpmpnmfgdg plrtaleqla
      301 defpfptniv lnnlwlfrpl vsrlmernyi tnslvrttma ltmfnagvkv nvippvaeai
      361 infrihpaqt vqevlklakd ivaddrvqfh vldafdplpv spsddqalgy qllrqtiqsv
      421 fpevnivapg tcigntdsrh ylnlttsiyr fnpvylqpqg fssihginek isvqayetqv
      481 kfifefiqng dtdmepvphl hel
//
LOCUS       XP_061015911             200 aa            linear   MAM 02-DEC-2023
DEFINITION  ras-related protein Rab-7b [Dama dama].
ACCESSION   XP_061015911
VERSION     XP_061015911.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159928.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..200
                     /product="ras-related protein Rab-7b"
                     /calculated_mol_wt=22538
     Region          9..169
                     /region_name="Rab"
                     /note="Ras-related in brain (Rab) family of small
                     guanosine triphosphatases (GTPases); cd00154"
                     /db_xref="CDD:206640"
     Site            9..10
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206640"
     Site            15..22
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206640"
     Site            order(17..23,33,40,66,124..125,127,153..155)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206640"
     Site            23..33
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206640"
     Site            order(33,40..46)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206640"
     Site            40
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206640"
     Site            order(41,43..45,60,62,69..70,73,77,82)
                     /site_type="active"
                     /note="effector interaction site [active]"
                     /db_xref="CDD:206640"
     Site            order(41..42,44,62..63,70,74..76)
                     /site_type="active"
                     /note="GDI interaction site [active]"
                     /db_xref="CDD:206640"
     Site            41..45
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206640"
     Site            order(42..49,56,58)
                     /site_type="other"
                     /note="GEF interaction site [polypeptide binding]"
                     /db_xref="CDD:206640"
     Site            58..62
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206640"
     Site            63..66
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206640"
     Site            order(66,68..71,73..78)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206640"
     Site            order(69..71,73..74)
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206640"
     Site            77..78
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206640"
     Site            86..91
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206640"
     Site            117..121
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206640"
     Site            124..127
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206640"
     Site            153..155
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206640"
     Site            169
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206640"
     CDS             1..200
                     /gene="RAB7B"
                     /coded_by="XM_061159928.1:248..850"
                     /db_xref="GeneID:133068956"
ORIGIN      
        1 mnprkkvdlk liiigalgvg ktsllhryvh ktfyedyqtt lgasilskii ilddttlklq
       61 iwdtggqerf rsmvstfykg sdgcvlafdv tdlesfeale twrgdvlakt ipmeqsypmv
      121 vlgnkidlad rqvpqevaqg wckekdipyf evsakndinv vqafemlasr alsryrsile
      181 syltdsikls pedqpksrcc
//
LOCUS       XP_061015912             193 aa            linear   MAM 02-DEC-2023
DEFINITION  regulator of hemoglobinization and erythroid cell expansion protein
            isoform X1 [Dama dama].
ACCESSION   XP_061015912
VERSION     XP_061015912.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159929.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..193
                     /product="regulator of hemoglobinization and erythroid
                     cell expansion protein isoform X1"
                     /calculated_mol_wt=21140
     Region          7..193
                     /region_name="DUF4692"
                     /note="Regulator of human erythroid cell expansion (RHEX);
                     pfam15763"
                     /db_xref="CDD:434917"
     CDS             1..193
                     /gene="RHEX"
                     /coded_by="XM_061159929.1:402..983"
                     /db_xref="GeneID:133068959"
ORIGIN      
        1 mlaqvmevwh giviavvsli lqacllavin yllsrhmdag cawpgehpll tlalspaake
       61 nerilkgars qapsvspahc cppaakerke traernvlvp epryqhdsdt ssdssdssds
      121 sppttcqvnk dvnytqvvfa apgdrrndsv ldyenikeat dyvnvkpksh kpnfwtfvnp
      181 avsepveysq vvm
//
LOCUS       XP_061015914             193 aa            linear   MAM 02-DEC-2023
DEFINITION  regulator of hemoglobinization and erythroid cell expansion protein
            isoform X1 [Dama dama].
ACCESSION   XP_061015914
VERSION     XP_061015914.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159931.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..193
                     /product="regulator of hemoglobinization and erythroid
                     cell expansion protein isoform X1"
                     /calculated_mol_wt=21140
     Region          7..193
                     /region_name="DUF4692"
                     /note="Regulator of human erythroid cell expansion (RHEX);
                     pfam15763"
                     /db_xref="CDD:434917"
     CDS             1..193
                     /gene="RHEX"
                     /coded_by="XM_061159931.1:309..890"
                     /db_xref="GeneID:133068959"
ORIGIN      
        1 mlaqvmevwh giviavvsli lqacllavin yllsrhmdag cawpgehpll tlalspaake
       61 nerilkgars qapsvspahc cppaakerke traernvlvp epryqhdsdt ssdssdssds
      121 sppttcqvnk dvnytqvvfa apgdrrndsv ldyenikeat dyvnvkpksh kpnfwtfvnp
      181 avsepveysq vvm
//
LOCUS       XP_061015915             188 aa            linear   MAM 02-DEC-2023
DEFINITION  regulator of hemoglobinization and erythroid cell expansion protein
            isoform X2 [Dama dama].
ACCESSION   XP_061015915
VERSION     XP_061015915.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159932.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..188
                     /product="regulator of hemoglobinization and erythroid
                     cell expansion protein isoform X2"
                     /calculated_mol_wt=20597
     Region          2..188
                     /region_name="DUF4692"
                     /note="Regulator of human erythroid cell expansion (RHEX);
                     pfam15763"
                     /db_xref="CDD:434917"
     CDS             1..188
                     /gene="RHEX"
                     /coded_by="XM_061159932.1:348..914"
                     /db_xref="GeneID:133068959"
ORIGIN      
        1 mevwhgivia vvslilqacl lavinyllsr hmdagcawpg ehplltlals paakeneril
       61 kgarsqapsv spahccppaa kerketraer nvlvpepryq hdsdtssdss dssdsspptt
      121 cqvnkdvnyt qvvfaapgdr rndsvldyen ikeatdyvnv kpkshkpnfw tfvnpavsep
      181 veysqvvm
//
LOCUS       XP_061015916             173 aa            linear   MAM 02-DEC-2023
DEFINITION  regulator of hemoglobinization and erythroid cell expansion protein
            isoform X3 [Dama dama].
ACCESSION   XP_061015916
VERSION     XP_061015916.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159933.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..173
                     /product="regulator of hemoglobinization and erythroid
                     cell expansion protein isoform X3"
                     /calculated_mol_wt=19139
     Region          7..173
                     /region_name="DUF4692"
                     /note="Regulator of human erythroid cell expansion (RHEX);
                     pfam15763"
                     /db_xref="CDD:434917"
     CDS             1..173
                     /gene="RHEX"
                     /coded_by="XM_061159933.1:402..923"
                     /db_xref="GeneID:133068959"
ORIGIN      
        1 mlaqvmevwh giviavvsli lqacllavin yllsrhmake nerilkgars qapsvspahc
       61 cppaakerke traernvlvp epryqhdsdt ssdssdssds sppttcqvnk dvnytqvvfa
      121 apgdrrndsv ldyenikeat dyvnvkpksh kpnfwtfvnp avsepveysq vvm
//
LOCUS       XP_061015917             168 aa            linear   MAM 02-DEC-2023
DEFINITION  regulator of hemoglobinization and erythroid cell expansion protein
            isoform X4 [Dama dama].
ACCESSION   XP_061015917
VERSION     XP_061015917.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159934.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..168
                     /product="regulator of hemoglobinization and erythroid
                     cell expansion protein isoform X4"
                     /calculated_mol_wt=18596
     Region          2..168
                     /region_name="DUF4692"
                     /note="Regulator of human erythroid cell expansion (RHEX);
                     pfam15763"
                     /db_xref="CDD:434917"
     CDS             1..168
                     /gene="RHEX"
                     /coded_by="XM_061159934.1:132..638"
                     /db_xref="GeneID:133068959"
ORIGIN      
        1 mevwhgivia vvslilqacl lavinyllsr hmakeneril kgarsqapsv spahccppaa
       61 kerketraer nvlvpepryq hdsdtssdss dssdsspptt cqvnkdvnyt qvvfaapgdr
      121 rndsvldyen ikeatdyvnv kpkshkpnfw tfvnpavsep veysqvvm
//
LOCUS       XP_061015918            1084 aa            linear   MAM 02-DEC-2023
DEFINITION  SLIT-ROBO Rho GTPase-activating protein 2 isoform X1 [Dama dama].
ACCESSION   XP_061015918
VERSION     XP_061015918.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159935.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1084
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1084
                     /product="SLIT-ROBO Rho GTPase-activating protein 2
                     isoform X1"
                     /calculated_mol_wt=121904
     Region          26..289
                     /region_name="F-BAR_srGAP2"
                     /note="The F-BAR (FES-CIP4 Homology and
                     Bin/Amphiphysin/Rvs) domain of Slit-Robo GTPase Activating
                     Protein 2; cd07682"
                     /db_xref="CDD:153366"
     Site            order(31,34,41,44..45,48,51..52,55..56,59,63,66,70,109,
                     112,222,226,251,255,258,261..262,265,269,272,276,281,
                     284..285,288)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153366"
     Region          487..674
                     /region_name="RhoGAP_srGAP"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in srGAPs. srGAPs are
                     components of the intracellular part of Slit-Robo
                     signalling pathway that is important for axon guidance and
                     cell migration. srGAPs contain an...; cd04383"
                     /db_xref="CDD:239848"
     Site            order(527,566,570,639,642..643,665)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239848"
     Site            527
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239848"
     Region          732..784
                     /region_name="SH3_srGAP1-3"
                     /note="Src homology 3 domain of Slit-Robo GTPase
                     Activating Proteins 1, 2, and 3; cd11955"
                     /db_xref="CDD:212888"
     Site            order(737,739,742,746,764..765,778,780..781)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212888"
     Region          976..>1078
                     /region_name="PHA03269"
                     /note="envelope glycoprotein C; Provisional"
                     /db_xref="CDD:165527"
     CDS             1..1084
                     /gene="SRGAP2"
                     /coded_by="XM_061159935.1:673..3927"
                     /db_xref="GeneID:133068960"
ORIGIN      
        1 mtspakfkkd keiiaeydtq vkeiraqlie qmkcldqqce lrvqllqdlq dffrkkaeie
       61 mdysrnlekl aerflaktrs tkdqqfkkdq nvlspvncwn lllnqvkres rdhttlsdiy
      121 lnniiprfvq vsedsgrlfk kskevgqqlq ddllkvlnel ysvmktyhmy nadsisaqsk
      181 lkeaekqeek qigksvkqed rqtprspdst snvrieekhv rrssvkkiek mkekrqakyt
      241 enklkaikar neyllaleat nasvfkyyih dlsdlidqcc dlgyhaslnr alrtflsael
      301 nleqskhegl daienavenl datsdkqrlm emynnvfcpp mkfefqphmg dmasqlcaqq
      361 pvqselvqrc qqlqsrlstl kieneevkkt meatlqtiqd ivtvedfdvs dcfqysnsme
      421 svkstvsetf mskpsiakrr anqqeteqfy ftkmkeyleg rnlitklqak hdllqktlge
      481 sqrtdcslar rsstvrkqds sqaiplvves cirfisrhgl qhegifrvsg sqvevndikn
      541 afergedpla gdqndhdmds iagvlklyfr glehplfpkd ifhdlmacvt mdslqeralh
      601 irkvllalpk ttlivmrylf aflnhlsqfs eenmmdpynl aicfgpslms vpeghdqvsc
      661 qahvnelikt iiiqhenvfp sprelegpiy srggstedyc dsphgettsa edstqdvtae
      721 hhtsddecep ieaiakfdyv grtarelsfk kgaslllyqr asddwwegrh ngidgliphq
      781 yivvqdtedg vversspkse ieviseppee kvtaragasc psgghvadiy laninntlhl
      841 kkskpmttkq rkrpesgsir ktfrsdghgl sssltdsasp gvgascrpss qpilsqslpk
      901 egpdkcsisg hgslnsisrh sslknrldsp qirktvtagr sksfnnhrpm dpeviaqdie
      961 atmnsalnel relerqssvk hapdvvldtl eplktspvva ptsepssplh aqllkdpepa
     1021 fqrsastagd iacafrpvks vkmaaplkpp atrpkpavfp ktnatspgvg ssaspqstdk
     1081 sctv
//
LOCUS       XP_061015919            1083 aa            linear   MAM 02-DEC-2023
DEFINITION  SLIT-ROBO Rho GTPase-activating protein 2 isoform X2 [Dama dama].
ACCESSION   XP_061015919
VERSION     XP_061015919.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159936.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1083
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1083
                     /product="SLIT-ROBO Rho GTPase-activating protein 2
                     isoform X2"
                     /calculated_mol_wt=121776
     Region          26..288
                     /region_name="F-BAR_srGAP2"
                     /note="The F-BAR (FES-CIP4 Homology and
                     Bin/Amphiphysin/Rvs) domain of Slit-Robo GTPase Activating
                     Protein 2; cd07682"
                     /db_xref="CDD:153366"
     Site            order(31,34,41,44..45,48,51..52,55..56,59,63,66,70,109,
                     112,222,226,251,255,258,261..262,265,269,272,276,280,
                     283..284,287)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153366"
     Region          486..673
                     /region_name="RhoGAP_srGAP"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in srGAPs. srGAPs are
                     components of the intracellular part of Slit-Robo
                     signalling pathway that is important for axon guidance and
                     cell migration. srGAPs contain an...; cd04383"
                     /db_xref="CDD:239848"
     Site            order(526,565,569,638,641..642,664)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239848"
     Site            526
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239848"
     Region          731..783
                     /region_name="SH3_srGAP1-3"
                     /note="Src homology 3 domain of Slit-Robo GTPase
                     Activating Proteins 1, 2, and 3; cd11955"
                     /db_xref="CDD:212888"
     Site            order(736,738,741,745,763..764,777,779..780)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212888"
     Region          975..>1077
                     /region_name="PHA03269"
                     /note="envelope glycoprotein C; Provisional"
                     /db_xref="CDD:165527"
     CDS             1..1083
                     /gene="SRGAP2"
                     /coded_by="XM_061159936.1:673..3924"
                     /db_xref="GeneID:133068960"
ORIGIN      
        1 mtspakfkkd keiiaeydtq vkeiraqlie qmkcldqqce lrvqllqdlq dffrkkaeie
       61 mdysrnlekl aerflaktrs tkdqqfkkdq nvlspvncwn lllnqvkres rdhttlsdiy
      121 lnniiprfvq vsedsgrlfk kskevgqqlq ddllkvlnel ysvmktyhmy nadsisaqsk
      181 lkeaekqeek qigksvkqed rqtprspdst snvrieekhv rrssvkkiek mkekrqakyt
      241 enklkaikar neyllaleat nasvfkyyih dlsdlidccd lgyhaslnra lrtflsaeln
      301 leqskhegld aienavenld atsdkqrlme mynnvfcppm kfefqphmgd masqlcaqqp
      361 vqselvqrcq qlqsrlstlk ieneevkktm eatlqtiqdi vtvedfdvsd cfqysnsmes
      421 vkstvsetfm skpsiakrra nqqeteqfyf tkmkeylegr nlitklqakh dllqktlges
      481 qrtdcslarr sstvrkqdss qaiplvvesc irfisrhglq hegifrvsgs qvevndikna
      541 fergedplag dqndhdmdsi agvlklyfrg lehplfpkdi fhdlmacvtm dslqeralhi
      601 rkvllalpkt tlivmrylfa flnhlsqfse enmmdpynla icfgpslmsv peghdqvscq
      661 ahvnelikti iiqhenvfps prelegpiys rggstedycd sphgettsae dstqdvtaeh
      721 htsddecepi eaiakfdyvg rtarelsfkk gaslllyqra sddwwegrhn gidgliphqy
      781 ivvqdtedgv versspksei eviseppeek vtaragascp sgghvadiyl aninntlhlk
      841 kskpmttkqr krpesgsirk tfrsdghgls ssltdsaspg vgascrpssq pilsqslpke
      901 gpdkcsisgh gslnsisrhs slknrldspq irktvtagrs ksfnnhrpmd peviaqdiea
      961 tmnsalnelr elerqssvkh apdvvldtle plktspvvap tsepssplha qllkdpepaf
     1021 qrsastagdi acafrpvksv kmaaplkppa trpkpavfpk tnatspgvgs saspqstdks
     1081 ctv
//
LOCUS       XP_061015920            1071 aa            linear   MAM 02-DEC-2023
DEFINITION  SLIT-ROBO Rho GTPase-activating protein 2 isoform X3 [Dama dama].
ACCESSION   XP_061015920
VERSION     XP_061015920.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159937.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1071
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1071
                     /product="SLIT-ROBO Rho GTPase-activating protein 2
                     isoform X3"
                     /calculated_mol_wt=120424
     Region          26..289
                     /region_name="F-BAR_srGAP2"
                     /note="The F-BAR (FES-CIP4 Homology and
                     Bin/Amphiphysin/Rvs) domain of Slit-Robo GTPase Activating
                     Protein 2; cd07682"
                     /db_xref="CDD:153366"
     Site            order(31,34,41,44..45,48,51..52,55..56,59,63,66,70,109,
                     112,222,226,251,255,258,261..262,265,269,272,276,281,
                     284..285,288)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153366"
     Region          487..674
                     /region_name="RhoGAP_srGAP"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in srGAPs. srGAPs are
                     components of the intracellular part of Slit-Robo
                     signalling pathway that is important for axon guidance and
                     cell migration. srGAPs contain an...; cd04383"
                     /db_xref="CDD:239848"
     Site            order(527,566,570,639,642..643,665)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239848"
     Site            527
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239848"
     Region          732..784
                     /region_name="SH3_srGAP1-3"
                     /note="Src homology 3 domain of Slit-Robo GTPase
                     Activating Proteins 1, 2, and 3; cd11955"
                     /db_xref="CDD:212888"
     Site            order(737,739,742,746,764..765,778,780..781)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212888"
     Region          963..>1065
                     /region_name="PHA03269"
                     /note="envelope glycoprotein C; Provisional"
                     /db_xref="CDD:165527"
     CDS             1..1071
                     /gene="SRGAP2"
                     /coded_by="XM_061159937.1:673..3888"
                     /db_xref="GeneID:133068960"
ORIGIN      
        1 mtspakfkkd keiiaeydtq vkeiraqlie qmkcldqqce lrvqllqdlq dffrkkaeie
       61 mdysrnlekl aerflaktrs tkdqqfkkdq nvlspvncwn lllnqvkres rdhttlsdiy
      121 lnniiprfvq vsedsgrlfk kskevgqqlq ddllkvlnel ysvmktyhmy nadsisaqsk
      181 lkeaekqeek qigksvkqed rqtprspdst snvrieekhv rrssvkkiek mkekrqakyt
      241 enklkaikar neyllaleat nasvfkyyih dlsdlidqcc dlgyhaslnr alrtflsael
      301 nleqskhegl daienavenl datsdkqrlm emynnvfcpp mkfefqphmg dmasqlcaqq
      361 pvqselvqrc qqlqsrlstl kieneevkkt meatlqtiqd ivtvedfdvs dcfqysnsme
      421 svkstvsetf mskpsiakrr anqqeteqfy ftkmkeyleg rnlitklqak hdllqktlge
      481 sqrtdcslar rsstvrkqds sqaiplvves cirfisrhgl qhegifrvsg sqvevndikn
      541 afergedpla gdqndhdmds iagvlklyfr glehplfpkd ifhdlmacvt mdslqeralh
      601 irkvllalpk ttlivmrylf aflnhlsqfs eenmmdpynl aicfgpslms vpeghdqvsc
      661 qahvnelikt iiiqhenvfp sprelegpiy srggstedyc dsphgettsa edstqdvtae
      721 hhtsddecep ieaiakfdyv grtarelsfk kgaslllyqr asddwwegrh ngidgliphq
      781 yivvqdtedg vversspkse ieviseppee kvtaragasc psgghvadiy laninkqrkr
      841 pesgsirktf rsdghglsss ltdsaspgvg ascrpssqpi lsqslpkegp dkcsisghgs
      901 lnsisrhssl knrldspqir ktvtagrsks fnnhrpmdpe viaqdieatm nsalnelrel
      961 erqssvkhap dvvldtlepl ktspvvapts epssplhaql lkdpepafqr sastagdiac
     1021 afrpvksvkm aaplkppatr pkpavfpktn atspgvgssa spqstdksct v
//
LOCUS       XP_061015921            1070 aa            linear   MAM 02-DEC-2023
DEFINITION  SLIT-ROBO Rho GTPase-activating protein 2 isoform X4 [Dama dama].
ACCESSION   XP_061015921
VERSION     XP_061015921.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159938.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1070
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1070
                     /product="SLIT-ROBO Rho GTPase-activating protein 2
                     isoform X4"
                     /calculated_mol_wt=120295
     Region          26..288
                     /region_name="F-BAR_srGAP2"
                     /note="The F-BAR (FES-CIP4 Homology and
                     Bin/Amphiphysin/Rvs) domain of Slit-Robo GTPase Activating
                     Protein 2; cd07682"
                     /db_xref="CDD:153366"
     Site            order(31,34,41,44..45,48,51..52,55..56,59,63,66,70,109,
                     112,222,226,251,255,258,261..262,265,269,272,276,280,
                     283..284,287)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153366"
     Region          486..673
                     /region_name="RhoGAP_srGAP"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in srGAPs. srGAPs are
                     components of the intracellular part of Slit-Robo
                     signalling pathway that is important for axon guidance and
                     cell migration. srGAPs contain an...; cd04383"
                     /db_xref="CDD:239848"
     Site            order(526,565,569,638,641..642,664)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239848"
     Site            526
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239848"
     Region          731..783
                     /region_name="SH3_srGAP1-3"
                     /note="Src homology 3 domain of Slit-Robo GTPase
                     Activating Proteins 1, 2, and 3; cd11955"
                     /db_xref="CDD:212888"
     Site            order(736,738,741,745,763..764,777,779..780)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212888"
     Region          962..>1064
                     /region_name="PHA03269"
                     /note="envelope glycoprotein C; Provisional"
                     /db_xref="CDD:165527"
     CDS             1..1070
                     /gene="SRGAP2"
                     /coded_by="XM_061159938.1:673..3885"
                     /db_xref="GeneID:133068960"
ORIGIN      
        1 mtspakfkkd keiiaeydtq vkeiraqlie qmkcldqqce lrvqllqdlq dffrkkaeie
       61 mdysrnlekl aerflaktrs tkdqqfkkdq nvlspvncwn lllnqvkres rdhttlsdiy
      121 lnniiprfvq vsedsgrlfk kskevgqqlq ddllkvlnel ysvmktyhmy nadsisaqsk
      181 lkeaekqeek qigksvkqed rqtprspdst snvrieekhv rrssvkkiek mkekrqakyt
      241 enklkaikar neyllaleat nasvfkyyih dlsdlidccd lgyhaslnra lrtflsaeln
      301 leqskhegld aienavenld atsdkqrlme mynnvfcppm kfefqphmgd masqlcaqqp
      361 vqselvqrcq qlqsrlstlk ieneevkktm eatlqtiqdi vtvedfdvsd cfqysnsmes
      421 vkstvsetfm skpsiakrra nqqeteqfyf tkmkeylegr nlitklqakh dllqktlges
      481 qrtdcslarr sstvrkqdss qaiplvvesc irfisrhglq hegifrvsgs qvevndikna
      541 fergedplag dqndhdmdsi agvlklyfrg lehplfpkdi fhdlmacvtm dslqeralhi
      601 rkvllalpkt tlivmrylfa flnhlsqfse enmmdpynla icfgpslmsv peghdqvscq
      661 ahvnelikti iiqhenvfps prelegpiys rggstedycd sphgettsae dstqdvtaeh
      721 htsddecepi eaiakfdyvg rtarelsfkk gaslllyqra sddwwegrhn gidgliphqy
      781 ivvqdtedgv versspksei eviseppeek vtaragascp sgghvadiyl aninkqrkrp
      841 esgsirktfr sdghglsssl tdsaspgvga scrpssqpil sqslpkegpd kcsisghgsl
      901 nsisrhsslk nrldspqirk tvtagrsksf nnhrpmdpev iaqdieatmn salnelrele
      961 rqssvkhapd vvldtleplk tspvvaptse pssplhaqll kdpepafqrs astagdiaca
     1021 frpvksvkma aplkppatrp kpavfpktna tspgvgssas pqstdksctv
//
LOCUS       XP_061015922             790 aa            linear   MAM 02-DEC-2023
DEFINITION  SLIT-ROBO Rho GTPase-activating protein 2 isoform X5 [Dama dama].
ACCESSION   XP_061015922
VERSION     XP_061015922.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159939.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..790
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..790
                     /product="SLIT-ROBO Rho GTPase-activating protein 2
                     isoform X5"
                     /calculated_mol_wt=90789
     Region          26..289
                     /region_name="BAR"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain, a
                     dimerization module that binds membranes and detects
                     membrane curvature; cl12013"
                     /db_xref="CDD:472257"
     Site            order(31,34..35,39,41..42,45..46,48..49,59..60,62..63,
                     66..67,69..70,73,112,115..116,247,250..251,253,255,
                     258..259,261..262,265..266,269..270,272..273,276..277,
                     280..281)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153366"
     Region          487..674
                     /region_name="RhoGAP_srGAP"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in srGAPs. srGAPs are
                     components of the intracellular part of Slit-Robo
                     signalling pathway that is important for axon guidance and
                     cell migration. srGAPs contain an...; cd04383"
                     /db_xref="CDD:239848"
     Site            order(527,566,570,639,642..643,665)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239848"
     Site            527
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239848"
     Region          732..784
                     /region_name="SH3_srGAP1-3"
                     /note="Src homology 3 domain of Slit-Robo GTPase
                     Activating Proteins 1, 2, and 3; cd11955"
                     /db_xref="CDD:212888"
     Site            order(737,739,742,746,764..765,778,780..781)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212888"
     CDS             1..790
                     /gene="SRGAP2"
                     /coded_by="XM_061159939.1:673..3045"
                     /db_xref="GeneID:133068960"
ORIGIN      
        1 mtspakfkkd keiiaeydtq vkeiraqlie qmkcldqqce lrvqllqdlq dffrkkaeie
       61 mdysrnlekl aerflaktrs tkdqqfkkdq nvlspvncwn lllnqvkres rdhttlsdiy
      121 lnniiprfvq vsedsgrlfk kskevgqqlq ddllkvlnel ysvmktyhmy nadsisaqsk
      181 lkeaekqeek qigksvkqed rqtprspdst snvrieekhv rrssvkkiek mkekrqakyt
      241 enklkaikar neyllaleat nasvfkyyih dlsdlidqcc dlgyhaslnr alrtflsael
      301 nleqskhegl daienavenl datsdkqrlm emynnvfcpp mkfefqphmg dmasqlcaqq
      361 pvqselvqrc qqlqsrlstl kieneevkkt meatlqtiqd ivtvedfdvs dcfqysnsme
      421 svkstvsetf mskpsiakrr anqqeteqfy ftkmkeyleg rnlitklqak hdllqktlge
      481 sqrtdcslar rsstvrkqds sqaiplvves cirfisrhgl qhegifrvsg sqvevndikn
      541 afergedpla gdqndhdmds iagvlklyfr glehplfpkd ifhdlmacvt mdslqeralh
      601 irkvllalpk ttlivmrylf aflnhlsqfs eenmmdpynl aicfgpslms vpeghdqvsc
      661 qahvnelikt iiiqhenvfp sprelegpiy srggstedyc dsphgettsa edstqdvtae
      721 hhtsddecep ieaiakfdyv grtarelsfk kgaslllyqr asddwwegrh ngidgliphq
      781 yivvqdtlis
//
LOCUS       XP_061015924             149 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM72A isoform X1 [Dama dama].
ACCESSION   XP_061015924
VERSION     XP_061015924.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159941.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..149
                     /product="protein FAM72A isoform X1"
                     /calculated_mol_wt=16535
     Region          6..149
                     /region_name="FAM72"
                     /note="FAM72 protein; pfam14976"
                     /db_xref="CDD:405641"
     CDS             1..149
                     /gene="FAM72A"
                     /coded_by="XM_061159941.1:864..1313"
                     /db_xref="GeneID:133068961"
ORIGIN      
        1 mstssctfkd rrvsilcckf ckqvlssrgm kavlladtei dlfstdippt navdfigrcy
       61 fteickcklk diaclkcgni vgyhvivpcc scllscnngh fwmfhsqavy ginrldstgv
      121 nfllwgnlpe veentdedvl disaeecir
//
LOCUS       XP_061015925              94 aa            linear   MAM 02-DEC-2023
DEFINITION  protein FAM72A isoform X2 [Dama dama].
ACCESSION   XP_061015925
VERSION     XP_061015925.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159942.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..94
                     /product="protein FAM72A isoform X2"
                     /calculated_mol_wt=10612
     Region          6..>76
                     /region_name="FAM72"
                     /note="FAM72 protein; pfam14976"
                     /db_xref="CDD:405641"
     CDS             1..94
                     /gene="FAM72A"
                     /coded_by="XM_061159942.1:995..1279"
                     /db_xref="GeneID:133068961"
ORIGIN      
        1 mstssctfkd rrvsilcckf ckqvlssrgm kavlladtei dlfstdippt navdfigrcy
       61 fteickcklk diaclkwcef ptlgqlargr reyr
//
LOCUS       XP_061015926             718 aa            linear   MAM 02-DEC-2023
DEFINITION  inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform
            X1 [Dama dama].
ACCESSION   XP_061015926
VERSION     XP_061015926.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159943.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..718
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..718
                     /product="inhibitor of nuclear factor kappa-B kinase
                     subunit epsilon isoform X1"
                     /calculated_mol_wt=80610
     Region          15..330
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(15..18,21,23,36,38,68,86..89,135,139..140,142,
                     156..157)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          308..395
                     /region_name="TBK1_ULD"
                     /note="TANK binding kinase 1 ubiquitin-like domain;
                     pfam18396"
                     /db_xref="CDD:465744"
     Region          402..648
                     /region_name="TBK1_CCD1"
                     /note="TANK-binding kinase 1 coiled-coil domain 1;
                     pfam18394"
                     /db_xref="CDD:465742"
     Region          679..717
                     /region_name="TBK1_IKKE-like_C"
                     /note="C-terminal domain of non-canonical Inhibitor of
                     kappa B kinases, IKK-E and TBK1, and similar proteins;
                     cl41735"
                     /db_xref="CDD:425366"
     Site            order(680..682,684..685,688..689,691..692,695..696,
                     698..699,702..703,705..706,708..710,712..714)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:409261"
     CDS             1..718
                     /gene="IKBKE"
                     /coded_by="XM_061159943.1:340..2496"
                     /db_xref="GeneID:133068962"
ORIGIN      
        1 mqstvnylwh tddllgqgat asvykarnkk sgelvavkvf ntasylrpre vqvrefevlr
       61 klnhqniikl faveetgagr qkvlvmeycs sgsllsvles penafglped eflvvlrcvv
      121 agmnhlreng ivhrdikpgn imrllgeegq siykltdfga areldddekf vsvygteeyl
      181 hpdmyeravl rkpqqkvfgv tvdlwsigvt lyhaatgslp fvpfggprrn keimyritte
      241 kpagaiagtq rrengplews ytlpitcqls mglqnqlvpi lanileaeqa kcwgfdqffa
      301 etsdilqrgv vhvfslpqav lhrvyvhahn tiaifleavy eqtsvapqhq eylfeghlcv
      361 lepglsaqhi ahttassplt lfsmaseppk glafrdpald vpkfvpkvdl qadystakgi
      421 lgagyqalrl artllggqel mirglhwfve mlqatcrrtl evtrmallfl ssslgterfs
      481 gvagvpelqe lkrttelrsr lrnlaevlsr cshnitetqk tlsdlrselv knrdqvhedr
      541 siqqiqccld kmyltykqfk ksrmrpglgy neeqihkldk mnfshlakrl lqvfqeecvq
      601 kyqaslvthg krmrlvhetr nhlrllgcsv aacnaeaqga qeslskildr lshqllqdrt
      661 qgapaspppt apypssalkd lvlhmqelyg emkvlasdlq dnnriiegls rvplapdi
//
LOCUS       XP_061015927             718 aa            linear   MAM 02-DEC-2023
DEFINITION  inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform
            X1 [Dama dama].
ACCESSION   XP_061015927
VERSION     XP_061015927.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159944.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..718
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..718
                     /product="inhibitor of nuclear factor kappa-B kinase
                     subunit epsilon isoform X1"
                     /calculated_mol_wt=80610
     Region          15..330
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(15..18,21,23,36,38,68,86..89,135,139..140,142,
                     156..157)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          308..395
                     /region_name="TBK1_ULD"
                     /note="TANK binding kinase 1 ubiquitin-like domain;
                     pfam18396"
                     /db_xref="CDD:465744"
     Region          402..648
                     /region_name="TBK1_CCD1"
                     /note="TANK-binding kinase 1 coiled-coil domain 1;
                     pfam18394"
                     /db_xref="CDD:465742"
     Region          679..717
                     /region_name="TBK1_IKKE-like_C"
                     /note="C-terminal domain of non-canonical Inhibitor of
                     kappa B kinases, IKK-E and TBK1, and similar proteins;
                     cl41735"
                     /db_xref="CDD:425366"
     Site            order(680..682,684..685,688..689,691..692,695..696,
                     698..699,702..703,705..706,708..710,712..714)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:409261"
     CDS             1..718
                     /gene="IKBKE"
                     /coded_by="XM_061159944.1:449..2605"
                     /db_xref="GeneID:133068962"
ORIGIN      
        1 mqstvnylwh tddllgqgat asvykarnkk sgelvavkvf ntasylrpre vqvrefevlr
       61 klnhqniikl faveetgagr qkvlvmeycs sgsllsvles penafglped eflvvlrcvv
      121 agmnhlreng ivhrdikpgn imrllgeegq siykltdfga areldddekf vsvygteeyl
      181 hpdmyeravl rkpqqkvfgv tvdlwsigvt lyhaatgslp fvpfggprrn keimyritte
      241 kpagaiagtq rrengplews ytlpitcqls mglqnqlvpi lanileaeqa kcwgfdqffa
      301 etsdilqrgv vhvfslpqav lhrvyvhahn tiaifleavy eqtsvapqhq eylfeghlcv
      361 lepglsaqhi ahttassplt lfsmaseppk glafrdpald vpkfvpkvdl qadystakgi
      421 lgagyqalrl artllggqel mirglhwfve mlqatcrrtl evtrmallfl ssslgterfs
      481 gvagvpelqe lkrttelrsr lrnlaevlsr cshnitetqk tlsdlrselv knrdqvhedr
      541 siqqiqccld kmyltykqfk ksrmrpglgy neeqihkldk mnfshlakrl lqvfqeecvq
      601 kyqaslvthg krmrlvhetr nhlrllgcsv aacnaeaqga qeslskildr lshqllqdrt
      661 qgapaspppt apypssalkd lvlhmqelyg emkvlasdlq dnnriiegls rvplapdi
//
LOCUS       XP_061015928             716 aa            linear   MAM 02-DEC-2023
DEFINITION  inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform
            X2 [Dama dama].
ACCESSION   XP_061015928
VERSION     XP_061015928.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159945.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..716
                     /product="inhibitor of nuclear factor kappa-B kinase
                     subunit epsilon isoform X2"
                     /calculated_mol_wt=80307
     Region          15..330
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(15..18,21,23,36,38,68,86..89,135,139..140,142,
                     156..157)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          308..395
                     /region_name="TBK1_ULD"
                     /note="TANK binding kinase 1 ubiquitin-like domain;
                     pfam18396"
                     /db_xref="CDD:465744"
     Region          402..646
                     /region_name="TBK1_CCD1"
                     /note="TANK-binding kinase 1 coiled-coil domain 1;
                     pfam18394"
                     /db_xref="CDD:465742"
     Region          677..715
                     /region_name="TBK1_IKKE-like_C"
                     /note="C-terminal domain of non-canonical Inhibitor of
                     kappa B kinases, IKK-E and TBK1, and similar proteins;
                     cl41735"
                     /db_xref="CDD:425366"
     Site            order(678..680,682..683,686..687,689..690,693..694,
                     696..697,700..701,703..704,706..708,710..712)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:409261"
     CDS             1..716
                     /gene="IKBKE"
                     /coded_by="XM_061159945.1:341..2491"
                     /db_xref="GeneID:133068962"
ORIGIN      
        1 mqstvnylwh tddllgqgat asvykarnkk sgelvavkvf ntasylrpre vqvrefevlr
       61 klnhqniikl faveetgagr qkvlvmeycs sgsllsvles penafglped eflvvlrcvv
      121 agmnhlreng ivhrdikpgn imrllgeegq siykltdfga areldddekf vsvygteeyl
      181 hpdmyeravl rkpqqkvfgv tvdlwsigvt lyhaatgslp fvpfggprrn keimyritte
      241 kpagaiagtq rrengplews ytlpitcqls mglqnqlvpi lanileaeqa kcwgfdqffa
      301 etsdilqrgv vhvfslpqav lhrvyvhahn tiaifleavy eqtsvapqhq eylfeghlcv
      361 lepglsaqhi ahttassplt lfsmaseppk glafrdpald vpkfvpkvdl qadystakgi
      421 lgagyqalrl artllggqel mirglhwfve mlqatcrrtl evtrmallfl ssslgtesgv
      481 agvpelqelk rttelrsrlr nlaevlsrcs hnitetqktl sdlrselvkn rdqvhedrsi
      541 qqiqccldkm yltykqfkks rmrpglgyne eqihkldkmn fshlakrllq vfqeecvqky
      601 qaslvthgkr mrlvhetrnh lrllgcsvaa cnaeaqgaqe slskildrls hqllqdrtqg
      661 apasppptap ypssalkdlv lhmqelygem kvlasdlqdn nriieglsrv plapdi
//
LOCUS       XP_061015929             580 aa            linear   MAM 02-DEC-2023
DEFINITION  inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform
            X3 [Dama dama].
ACCESSION   XP_061015929
VERSION     XP_061015929.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159946.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..580
                     /product="inhibitor of nuclear factor kappa-B kinase
                     subunit epsilon isoform X3"
                     /calculated_mol_wt=65263
     Region          15..330
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(15..18,21,23,36,38,68,86..89,135,139..140,142,
                     156..157)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          308..395
                     /region_name="TBK1_ULD"
                     /note="TANK binding kinase 1 ubiquitin-like domain;
                     pfam18396"
                     /db_xref="CDD:465744"
     Region          402..>580
                     /region_name="TBK1_CCD1"
                     /note="TANK-binding kinase 1 coiled-coil domain 1;
                     pfam18394"
                     /db_xref="CDD:465742"
     CDS             1..580
                     /gene="IKBKE"
                     /coded_by="XM_061159946.1:342..2084"
                     /db_xref="GeneID:133068962"
ORIGIN      
        1 mqstvnylwh tddllgqgat asvykarnkk sgelvavkvf ntasylrpre vqvrefevlr
       61 klnhqniikl faveetgagr qkvlvmeycs sgsllsvles penafglped eflvvlrcvv
      121 agmnhlreng ivhrdikpgn imrllgeegq siykltdfga areldddekf vsvygteeyl
      181 hpdmyeravl rkpqqkvfgv tvdlwsigvt lyhaatgslp fvpfggprrn keimyritte
      241 kpagaiagtq rrengplews ytlpitcqls mglqnqlvpi lanileaeqa kcwgfdqffa
      301 etsdilqrgv vhvfslpqav lhrvyvhahn tiaifleavy eqtsvapqhq eylfeghlcv
      361 lepglsaqhi ahttassplt lfsmaseppk glafrdpald vpkfvpkvdl qadystakgi
      421 lgagyqalrl artllggqel mirglhwfve mlqatcrrtl evtrmallfl ssslgterfs
      481 gvagvpelqe lkrttelrsr lrnlaevlsr cshnitetqk tlsdlrselv knrdqvhedr
      541 siqqiqccld kmyltykqfk ksrmrpglgy neeqihkldk
//
LOCUS       XP_061015930             416 aa            linear   MAM 02-DEC-2023
DEFINITION  ras association domain-containing protein 5 isoform X1 [Dama dama].
ACCESSION   XP_061015930
VERSION     XP_061015930.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159947.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..416
                     /product="ras association domain-containing protein 5
                     isoform X1"
                     /calculated_mol_wt=46796
     Region          118..168
                     /region_name="C1_RASSF5"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in Ras association domain-containing protein 5
                     (RASSF5) and similar proteins; cd20886"
                     /db_xref="CDD:410436"
     Region          205..360
                     /region_name="RA_RASSF5"
                     /note="Ras-associating (RA) domain of Ras-association
                     domain family 5 (RASSF5); cd17220"
                     /db_xref="CDD:340740"
     Site            order(221,223..224,237,280,282..287,289,306..308)
                     /site_type="other"
                     /note="RA-Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:340740"
     Region          363..409
                     /region_name="SARAH_RASSF5"
                     /note="C-terminal SARAH domain found in Ras-association
                     domain-containing protein 5 (RASSF5); cd21892"
                     /db_xref="CDD:439186"
     Site            order(367..368,370,372,375,379,382..383,385..386,389..390,
                     393..394,396..397,400..401,404,407..408)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:439186"
     CDS             1..416
                     /gene="RASSF5"
                     /coded_by="XM_061159947.1:38..1288"
                     /db_xref="GeneID:133068965"
ORIGIN      
        1 mamaspaigq rpyrlllepe pprylqslsg peppppghss rrcapaplst apgaherrgs
       61 rraargdpep qprasrharp lrpglqqrlr rrpgaprprd vrsifeqpqd prvpaergeg
      121 hcfaelalrg grgwcdlcgr evwrralrca nckftchpec rsliqldcaq qdgasrdrps
      181 pestlavtfs qndckppeep qrpptlqeik qkiesynare kdclgmklse dgsytgfikv
      241 hlklrrpvtv pagirpqsiy daikdvdpaa ttdkrtsfyl pldavkqlhi sssttvsevi
      301 qgllkkfmvv dnpqkfalfk rihkdgqvlf qklsiadcpl ylrllagpdt dvlsfvlken
      361 etgevewdaf sipelqnflt ilekeeqdkv qqvqkkynkf rqkleealrk sqgkpa
//
LOCUS       XP_061015931             265 aa            linear   MAM 02-DEC-2023
DEFINITION  ras association domain-containing protein 5 isoform X2 [Dama dama].
ACCESSION   XP_061015931
VERSION     XP_061015931.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159948.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..265
                     /product="ras association domain-containing protein 5
                     isoform X2"
                     /calculated_mol_wt=30128
     Region          54..209
                     /region_name="RA_RASSF5"
                     /note="Ras-associating (RA) domain of Ras-association
                     domain family 5 (RASSF5); cd17220"
                     /db_xref="CDD:340740"
     Site            order(70,72..73,86,129,131..136,138,155..157)
                     /site_type="other"
                     /note="RA-Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:340740"
     Region          212..258
                     /region_name="SARAH_RASSF5"
                     /note="C-terminal SARAH domain found in Ras-association
                     domain-containing protein 5 (RASSF5); cd21892"
                     /db_xref="CDD:439186"
     Site            order(216..217,219,221,224,228,231..232,234..235,238..239,
                     242..243,245..246,249..250,253,256..257)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:439186"
     CDS             1..265
                     /gene="RASSF5"
                     /coded_by="XM_061159948.1:340..1137"
                     /db_xref="GeneID:133068965"
ORIGIN      
        1 mtvdssmssg ycsleeeled cfftakttff rnvqskrpsk ndckppeepq rpptlqeikq
       61 kiesynarek dclgmklsed gsytgfikvh lklrrpvtvp agirpqsiyd aikdvdpaat
      121 tdkrtsfylp ldavkqlhis ssttvseviq gllkkfmvvd npqkfalfkr ihkdgqvlfq
      181 klsiadcply lrllagpdtd vlsfvlkene tgevewdafs ipelqnflti lekeeqdkvq
      241 qvqkkynkfr qkleealrks qgkpa
//
LOCUS       XP_061015932             584 aa            linear   MAM 02-DEC-2023
DEFINITION  eukaryotic translation initiation factor 2D isoform X1 [Dama dama].
ACCESSION   XP_061015932
VERSION     XP_061015932.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159949.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..584
                     /product="eukaryotic translation initiation factor 2D
                     isoform X1"
                     /calculated_mol_wt=64316
     Region          6..81
                     /region_name="eIF2D_N"
                     /note="N-terminal domain of eIF2D and related proteins;
                     cd11610"
                     /db_xref="CDD:211423"
     Site            order(29..30,73,75,78..81)
                     /site_type="other"
                     /note="PUA domain interface [polypeptide binding]"
                     /db_xref="CDD:211423"
     Region          92..173
                     /region_name="PUA_eIF2d-like"
                     /note="PUA RNA-binding domain of eukaryotic translation
                     initiation factor 2D and similar proteins; cd21156"
                     /db_xref="CDD:409298"
     Site            order(101..102,105,110..111,113)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:409298"
     Region          490..574
                     /region_name="eIF2D_C"
                     /note="C-terminal domain of eIF2D and related proteins;
                     cd11608"
                     /db_xref="CDD:211321"
     Site            order(498,501..502,504,522,525..527,529..531,533,549,552)
                     /site_type="other"
                     /note="putative rRNA binding site [nucleotide binding]"
                     /db_xref="CDD:211321"
     CDS             1..584
                     /gene="EIF2D"
                     /coded_by="XM_061159949.1:164..1918"
                     /db_xref="GeneID:133068967"
ORIGIN      
        1 mfakafrvks ntaikgsdrr klradvaavf ptlgtdqvse lvpgkeelni vklyahrgda
       61 vtvyvsggnp ilfeleknly ptvytlwsyp dllptfttwp lvleklvgga dlmlpglvvp
      121 paglpqvqkg dlcavalvgn rapvavgvaa mstaemltsg lkgrgfsvlh tyqdhlwrsg
      181 nkssppsiap laldapdlse gkgcvkadtt legdmrqltl eeeeeeeeev qrrcekspse
      241 akedpgpggl hvdptdsktl qeqmdellqr cflhalkccv rkadlpllts tllgshmfsc
      301 cpegrqldik kssykklskf lqhmqqeqii qvqelskgve sivavdwkhp ritsfvipep
      361 sltsqtiqeg srgqpyhppd ikplycvpas mtllfqesgh kkgsvlegse vrtvvinyak
      421 kndlvdadnk nlvnldpilc dcilekdeqh tvrklpwdsl lsrclerlqp ayqvtfpgqe
      481 ptvkkgrvcp ieitlaqras nkkvtvvrnl eaygldpcsv aatlqqrcqa sttvtaapgl
      541 kdslqvqiqg nqihhlgrll leeyrlprky iqglekapkp gkkk
//
LOCUS       XP_061015933             472 aa            linear   MAM 02-DEC-2023
DEFINITION  eukaryotic translation initiation factor 2D isoform X2 [Dama dama].
ACCESSION   XP_061015933
VERSION     XP_061015933.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159950.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..472
                     /product="eukaryotic translation initiation factor 2D
                     isoform X2"
                     /calculated_mol_wt=51920
     Region          <1..61
                     /region_name="PUA_eIF2d-like"
                     /note="PUA RNA-binding domain of eukaryotic translation
                     initiation factor 2D and similar proteins; cd21156"
                     /db_xref="CDD:409298"
     Region          378..462
                     /region_name="eIF2D_C"
                     /note="C-terminal domain of eIF2D and related proteins;
                     cd11608"
                     /db_xref="CDD:211321"
     Site            order(386,389..390,392,410,413..415,417..419,421,437,440)
                     /site_type="other"
                     /note="putative rRNA binding site [nucleotide binding]"
                     /db_xref="CDD:211321"
     CDS             1..472
                     /gene="EIF2D"
                     /coded_by="XM_061159950.1:570..1988"
                     /db_xref="GeneID:133068967"
ORIGIN      
        1 mlpglvvppa glpqvqkgdl cavalvgnra pvavgvaams taemltsglk grgfsvlhty
       61 qdhlwrsgnk ssppsiapla ldapdlsegk gcvkadttle gdmrqltlee eeeeeeevqr
      121 rcekspseak edpgpgglhv dptdsktlqe qmdellqrcf lhalkccvrk adlplltstl
      181 lgshmfsccp egrqldikks sykklskflq hmqqeqiiqv qelskgvesi vavdwkhpri
      241 tsfvipepsl tsqtiqegsr gqpyhppdik plycvpasmt llfqesghkk gsvlegsevr
      301 tvvinyakkn dlvdadnknl vnldpilcdc ilekdeqhtv rklpwdslls rclerlqpay
      361 qvtfpgqept vkkgrvcpie itlaqrasnk kvtvvrnlea ygldpcsvaa tlqqrcqast
      421 tvtaapglkd slqvqiqgnq ihhlgrllle eyrlprkyiq glekapkpgk kk
//
LOCUS       XP_061015934             587 aa            linear   MAM 02-DEC-2023
DEFINITION  dual specificity tyrosine-phosphorylation-regulated kinase 3 [Dama
            dama].
ACCESSION   XP_061015934
VERSION     XP_061015934.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159951.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..587
                     /product="dual specificity
                     tyrosine-phosphorylation-regulated kinase 3"
                     /calculated_mol_wt=65462
     Region          143..522
                     /region_name="PKc_DYRK2_3"
                     /note="Catalytic domain of the protein kinases,
                     Dual-specificity tYrosine-phosphorylated and -Regulated
                     Kinases 2 and 3; cd14224"
                     /db_xref="CDD:271126"
     Site            order(215..219,223,236,238,252,272,288..291,294,296..297,
                     335,337,339..340,342,355,358,367,369..372,374,411)
                     /site_type="active"
                     /db_xref="CDD:271126"
     Site            order(215..219,223,236,238,272,288..291,294,335,337,
                     339..340,342,355)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271126"
     Site            order(252,296,335,337,358,367,369..372,374,411)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271126"
     Site            354..374
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271126"
     CDS             1..587
                     /gene="DYRK3"
                     /coded_by="XM_061159951.1:80..1843"
                     /db_xref="GeneID:133068968"
ORIGIN      
        1 mggtargpgr kdegppgaal ppqqrrlgdg vydtfmmide tkcppcsnvl cnpsepplpr
       61 rlnittehlt rdptqrflng gemkveqlfq efgsgradnl qsdgindsek cspstsqgks
      121 sdslntvkas ssskaskmvp ltpeqalkqy khhltayekl eivnypeiyf vgpnakkrhg
      181 viggpnnggy ddadgsyihv prdhlayrye vlkiigkgsf gqvarvydhk lrqyvalkmv
      241 rnekrfhrqa aeeirilehl kkqdktgsmn vihmlesftf rnhvcmafel lsidlyelik
      301 knkfqgfsiq lvrkfaqsil qsldalhknk iihcdlkpen illkqhgrsa tkvidfgssc
      361 feyqklytyi qsrfyrapei ilgsrystpi diwsfgcila elltgqplfp gedegdqlac
      421 mmellgmppa klleqskrak yfinskglpr ycsvttqadg ravlvggrsr rgkkrgppgs
      481 kdwgtalkgc edylfieflk rclqwdpsar ltpaqalrhp wisksvprpl tiekvsgkrv
      541 vnpanafqgl gsklppvvgi anklkanlms etnggiplcs vlpklin
//
LOCUS       XP_061015936             270 aa            linear   MAM 02-DEC-2023
DEFINITION  interleukin-10 [Dama dama].
ACCESSION   XP_061015936
VERSION     XP_061015936.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159953.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..270
                     /product="interleukin-10"
                     /calculated_mol_wt=30617
     Region          97..266
                     /region_name="IL10"
                     /note="Interleukin 10; pfam00726"
                     /db_xref="CDD:334228"
     CDS             1..270
                     /gene="IL10"
                     /coded_by="XM_061159953.1:72..884"
                     /db_xref="GeneID:133068969"
ORIGIN      
        1 mqkfifhphv fclrsnifkv lsknakless regregqrnl cqeicdtvaf ceweashnik
       61 ggtvgegqhn rglllqnqtt gptqrrrqss ampsssallc clvflagvaa srdasapsds
      121 scthfsnslp lmlrelrtaf grvktffqmk dqldsmlltq sllddfkgyl gcqalsemiq
      181 fyleevmpqa enhgpeikeh vnslgeklkt lrlrlrrchr flpcenkska veqvksvfsk
      241 lqergvykam sefdifinyi etyttmkmkn
//
LOCUS       XP_061015937             426 aa            linear   MAM 02-DEC-2023
DEFINITION  fas apoptotic inhibitory molecule 3 isoform X1 [Dama dama].
ACCESSION   XP_061015937
VERSION     XP_061015937.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159954.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..426
                     /product="fas apoptotic inhibitory molecule 3 isoform X1"
                     /calculated_mol_wt=46873
     Region          24..121
                     /region_name="IgV_pIgR_like"
                     /note="Immunoglobulin (Ig)-like domain in the polymeric Ig
                     receptor (pIgR) and similar proteins; cd05716"
                     /db_xref="CDD:409381"
     Region          24..37
                     /region_name="FR1"
                     /note="FR1 [structural motif]"
                     /db_xref="CDD:409381"
     Region          24..29
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409381"
     Region          31..38
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409381"
     Region          38..44
                     /region_name="CDR1"
                     /note="CDR1 [structural motif]"
                     /db_xref="CDD:409381"
     Region          44..49
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409381"
     Site            44..46
                     /site_type="other"
                     /note="CDR1-dIgA binding residues [polypeptide binding]"
                     /db_xref="CDD:409381"
     Region          45..49
                     /region_name="FR2"
                     /note="FR2 [structural motif]"
                     /db_xref="CDD:409381"
     Region          50..69
                     /region_name="CDR2"
                     /note="CDR2 [structural motif]"
                     /db_xref="CDD:409381"
     Region          59..63
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409381"
     Region          67..69
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409381"
     Region          75..106
                     /region_name="FR3"
                     /note="FR3 [structural motif]"
                     /db_xref="CDD:409381"
     Region          75..81
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409381"
     Region          85..93
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409381"
     Region          99..106
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409381"
     Region          107..115
                     /region_name="CDR3"
                     /note="CDR3 [structural motif]"
                     /db_xref="CDD:409381"
     Region          115..121
                     /region_name="FR4"
                     /note="FR4 [structural motif]"
                     /db_xref="CDD:409381"
     Region          115..121
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409381"
     CDS             1..426
                     /gene="FCMR"
                     /coded_by="XM_061159954.1:148..1428"
                     /db_xref="GeneID:133068970"
ORIGIN      
        1 mdlwlwalyf fpvvgalkvl pevkmegmlg gsitiecplp ethvriylcr tigksgrctt
       61 vvssskfvre efkhrvtleq hpdrnlflve mtelaksdng vyacgvgwnt dqgktqqitl
      121 tvhsvyepsw eeaptpgppa wfhrflqmhm pswfqmpaha sslefiskvt tpaqrtdspq
      181 ahqasptpsi thrpqvsras svataeptif lpsittskts aqkgllrlqt asynhqtwlh
      241 rqrasnqgpg avsgmedqgv fvliptilgl illallgllv krifqrrkal srrvrrlavr
      301 mrtldasqpa lsrrprvcrr prtpsniysa cprrprgada agggaapppd pgapaasapp
      361 rvspapsqvp eipwphvpsl kidceyvsfc hqpaakgedm dsddyinvpc lthlsscapg
      421 prpwcq
//
LOCUS       XP_061015938             382 aa            linear   MAM 02-DEC-2023
DEFINITION  fas apoptotic inhibitory molecule 3 isoform X2 [Dama dama].
ACCESSION   XP_061015938
VERSION     XP_061015938.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159955.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..382
                     /product="fas apoptotic inhibitory molecule 3 isoform X2"
                     /calculated_mol_wt=41704
     Region          24..121
                     /region_name="IgV_pIgR_like"
                     /note="Immunoglobulin (Ig)-like domain in the polymeric Ig
                     receptor (pIgR) and similar proteins; cd05716"
                     /db_xref="CDD:409381"
     Region          24..37
                     /region_name="FR1"
                     /note="FR1 [structural motif]"
                     /db_xref="CDD:409381"
     Region          24..29
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409381"
     Region          31..38
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409381"
     Region          38..44
                     /region_name="CDR1"
                     /note="CDR1 [structural motif]"
                     /db_xref="CDD:409381"
     Region          44..49
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409381"
     Site            44..46
                     /site_type="other"
                     /note="CDR1-dIgA binding residues [polypeptide binding]"
                     /db_xref="CDD:409381"
     Region          45..49
                     /region_name="FR2"
                     /note="FR2 [structural motif]"
                     /db_xref="CDD:409381"
     Region          50..69
                     /region_name="CDR2"
                     /note="CDR2 [structural motif]"
                     /db_xref="CDD:409381"
     Region          59..63
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409381"
     Region          67..69
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409381"
     Region          75..106
                     /region_name="FR3"
                     /note="FR3 [structural motif]"
                     /db_xref="CDD:409381"
     Region          75..81
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409381"
     Region          85..93
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409381"
     Region          99..106
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409381"
     Region          107..115
                     /region_name="CDR3"
                     /note="CDR3 [structural motif]"
                     /db_xref="CDD:409381"
     Region          115..121
                     /region_name="FR4"
                     /note="FR4 [structural motif]"
                     /db_xref="CDD:409381"
     Region          115..121
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409381"
     CDS             1..382
                     /gene="FCMR"
                     /coded_by="XM_061159955.1:149..1297"
                     /db_xref="GeneID:133068970"
ORIGIN      
        1 mdlwlwalyf fpvvgalkvl pevkmegmlg gsitiecplp ethvriylcr tigksgrctt
       61 vvssskfvre efkhrvtleq hpdrnlflve mtelaksdng vyacgvgwnt dqgktqqitl
      121 tvhsvttpaq rtdspqahqa sptpsithrp qvsrassvat aeptiflpsi ttsktsaqkg
      181 llrlqtasyn hqtwlhrqra snqgpgavsg medqgvfvli ptilglilla llgllvkrif
      241 qrrkalsrrv rrlavrmrtl dasqpalsrr prvcrrprtp sniysacprr prgadaaggg
      301 aapppdpgap aasapprvsp apsqvpeipw phvpslkidc eyvsfchqpa akgedmdsdd
      361 yinvpclthl sscapgprpw cq
//
LOCUS       XP_061015939             270 aa            linear   MAM 02-DEC-2023
DEFINITION  fas apoptotic inhibitory molecule 3 isoform X3 [Dama dama].
ACCESSION   XP_061015939
VERSION     XP_061015939.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159956.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..270
                     /product="fas apoptotic inhibitory molecule 3 isoform X3"
                     /calculated_mol_wt=29319
     CDS             1..270
                     /gene="FCMR"
                     /coded_by="XM_061159956.1:149..961"
                     /db_xref="GeneID:133068970"
ORIGIN      
        1 mdlwlwalyf fpvttpaqrt dspqahqasp tpsithrpqv srassvatae ptiflpsitt
       61 sktsaqkgll rlqtasynhq twlhrqrasn qgpgavsgme dqgvfvlipt ilglillall
      121 gllvkrifqr rkalsrrvrr lavrmrtlda sqpalsrrpr vcrrprtpsn iysacprrpr
      181 gadaagggaa pppdpgapaa sapprvspap sqvpeipwph vpslkidcey vsfchqpaak
      241 gedmdsddyi nvpclthlss capgprpwcq
//
LOCUS       XP_061015940             811 aa            linear   MAM 02-DEC-2023
DEFINITION  polymeric immunoglobulin receptor isoform X1 [Dama dama].
ACCESSION   XP_061015940
VERSION     XP_061015940.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159957.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..811
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..811
                     /product="polymeric immunoglobulin receptor isoform X1"
                     /calculated_mol_wt=88112
     Region          77..175
                     /region_name="IgV_pIgR_like"
                     /note="Immunoglobulin (Ig)-like domain in the polymeric Ig
                     receptor (pIgR) and similar proteins; cd05716"
                     /db_xref="CDD:409381"
     Region          77..93
                     /region_name="FR1"
                     /note="FR1 [structural motif]"
                     /db_xref="CDD:409381"
     Region          80..85
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409381"
     Region          87..94
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409381"
     Region          94..104
                     /region_name="CDR1"
                     /note="CDR1 [structural motif]"
                     /db_xref="CDD:409381"
     Region          104..109
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409381"
     Site            104..106
                     /site_type="other"
                     /note="CDR1-dIgA binding residues [polypeptide binding]"
                     /db_xref="CDD:409381"
     Region          105..109
                     /region_name="FR2"
                     /note="FR2 [structural motif]"
                     /db_xref="CDD:409381"
     Region          110..128
                     /region_name="CDR2"
                     /note="CDR2 [structural motif]"
                     /db_xref="CDD:409381"
     Region          118..122
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409381"
     Region          126..128
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409381"
     Region          134..165
                     /region_name="FR3"
                     /note="FR3 [structural motif]"
                     /db_xref="CDD:409381"
     Region          134..140
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409381"
     Region          144..152
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409381"
     Region          158..165
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409381"
     Region          166..174
                     /region_name="CDR3"
                     /note="CDR3 [structural motif]"
                     /db_xref="CDD:409381"
     Region          189..278
                     /region_name="IgV_pIgR_like"
                     /note="Immunoglobulin (Ig)-like domain in the polymeric Ig
                     receptor (pIgR) and similar proteins; cd05716"
                     /db_xref="CDD:409381"
     Region          189..205
                     /region_name="FR1"
                     /note="FR1 [structural motif]"
                     /db_xref="CDD:409381"
     Region          192..197
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409381"
     Region          199..206
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409381"
     Region          206..214
                     /region_name="CDR1"
                     /note="CDR1 [structural motif]"
                     /db_xref="CDD:409381"
     Region          214..219
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409381"
     Site            214..216
                     /site_type="other"
                     /note="CDR1-dIgA binding residues [polypeptide binding]"
                     /db_xref="CDD:409381"
     Region          215..219
                     /region_name="FR2"
                     /note="FR2 [structural motif]"
                     /db_xref="CDD:409381"
     Region          220..237
                     /region_name="CDR2"
                     /note="CDR2 [structural motif]"
                     /db_xref="CDD:409381"
     Region          227..231
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409381"
     Region          235..237
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409381"
     Region          243..275
                     /region_name="FR3"
                     /note="FR3 [structural motif]"
                     /db_xref="CDD:409381"
     Region          243..249
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409381"
     Region          254..262
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409381"
     Region          268..275
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409381"
     Region          293..393
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          306..310
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          320..324
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          360..364
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          374..379
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          388..391
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          408..510
                     /region_name="IgV_pIgR_like"
                     /note="Immunoglobulin (Ig)-like domain in the polymeric Ig
                     receptor (pIgR) and similar proteins; cd05716"
                     /db_xref="CDD:409381"
     Region          410..423
                     /region_name="FR1"
                     /note="FR1 [structural motif]"
                     /db_xref="CDD:409381"
     Region          410..415
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409381"
     Region          417..424
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409381"
     Region          424..432
                     /region_name="CDR1"
                     /note="CDR1 [structural motif]"
                     /db_xref="CDD:409381"
     Region          432..437
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409381"
     Site            432..434
                     /site_type="other"
                     /note="CDR1-dIgA binding residues [polypeptide binding]"
                     /db_xref="CDD:409381"
     Region          433..437
                     /region_name="FR2"
                     /note="FR2 [structural motif]"
                     /db_xref="CDD:409381"
     Region          438..458
                     /region_name="CDR2"
                     /note="CDR2 [structural motif]"
                     /db_xref="CDD:409381"
     Region          448..452
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409381"
     Region          456..458
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409381"
     Region          464..495
                     /region_name="FR3"
                     /note="FR3 [structural motif]"
                     /db_xref="CDD:409381"
     Region          464..470
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409381"
     Region          474..482
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409381"
     Region          488..495
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409381"
     Region          496..504
                     /region_name="CDR3"
                     /note="CDR3 [structural motif]"
                     /db_xref="CDD:409381"
     Region          504..510
                     /region_name="FR4"
                     /note="FR4 [structural motif]"
                     /db_xref="CDD:409381"
     Region          504..510
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409381"
     Region          516..612
                     /region_name="IgV_pIgR_like"
                     /note="Immunoglobulin (Ig)-like domain in the polymeric Ig
                     receptor (pIgR) and similar proteins; cd05716"
                     /db_xref="CDD:409381"
     Region          516..534
                     /region_name="FR1"
                     /note="FR1 [structural motif]"
                     /db_xref="CDD:409381"
     Region          516..518
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409381"
     Region          521..526
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409381"
     Region          528..535
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409381"
     Region          535..543
                     /region_name="CDR1"
                     /note="CDR1 [structural motif]"
                     /db_xref="CDD:409381"
     Region          543..548
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409381"
     Site            543..545
                     /site_type="other"
                     /note="CDR1-dIgA binding residues [polypeptide binding]"
                     /db_xref="CDD:409381"
     Region          544..548
                     /region_name="FR2"
                     /note="FR2 [structural motif]"
                     /db_xref="CDD:409381"
     Region          549..564
                     /region_name="CDR2"
                     /note="CDR2 [structural motif]"
                     /db_xref="CDD:409381"
     Region          556..560
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409381"
     Region          567..598
                     /region_name="FR3"
                     /note="FR3 [structural motif]"
                     /db_xref="CDD:409381"
     Region          567..573
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409381"
     Region          577..585
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409381"
     Region          591..598
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409381"
     Region          599..607
                     /region_name="CDR3"
                     /note="CDR3 [structural motif]"
                     /db_xref="CDD:409381"
     Region          607..612
                     /region_name="FR4"
                     /note="FR4 [structural motif]"
                     /db_xref="CDD:409381"
     Region          607..612
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409381"
     CDS             1..811
                     /gene="PIGR"
                     /coded_by="XM_061159957.1:3..2438"
                     /db_xref="GeneID:133068971"
ORIGIN      
        1 mfitgdaksn ryyrgqkvse swtteashpl vplsfsnhag rwpggrapqe ppamsrlfla
       61 cllavfpvvs mkspifgpee vasvegrsvs itcyypptsv nrhtrkywcr qgarghcttl
      121 issggyvssd yvgranltnf pesgtfvvdi shltrndsgr ykcglgissr glnfdvslav
      181 sqdpaqtsdv hvypvelgrt vtincpftka nsqkikslcq migqtcvrii dstgykgsgy
      241 aerahlsilg tdtsvfsvvi nqikrsdagt yvcqagddak adksnavlqv lepepeliyg
      301 dlrssvtfdc tlgpevanmd kflcrqknge acdvvintlg kkakdfqgri lfqaktngvv
      361 svhitslrke dagryvcgaq pegepqegwp vqvwqlfvne etmipaspsv vkgvtggsvt
      421 iscpynpkda nslkywcrwe eaqngrcpql vqsqglvkeq yegrlallae pgngtytvil
      481 nqlteqdtgf ywcvtdgdsr wmstvelkvv ggepslkapk nvtawlgepf klschfpckf
      541 ysfekywckw snkgcsalpt qddgpsqafv ncdqnsqivs lnlntvtkad egwywcgvke
      601 ghqygetvav yvavenrvkg sqdtkqvkaa pggaaiesra raieskvipe psffeeesav
      661 rgaaggpgap adtsrpaehg gsskvlvstl vplglvlaag vvaigvvrar hrknvdrisi
      721 rsyrtdisms dfensrdfeg rdnmgaspea qetslggkde fatttedtve skepkkakrs
      781 skeeadeaft tfllqannlv saatqdgpke a
//
LOCUS       XP_061015941             758 aa            linear   MAM 02-DEC-2023
DEFINITION  polymeric immunoglobulin receptor isoform X2 [Dama dama].
ACCESSION   XP_061015941
VERSION     XP_061015941.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159958.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..758
                     /product="polymeric immunoglobulin receptor isoform X2"
                     /calculated_mol_wt=82259
     Region          24..122
                     /region_name="IgV_pIgR_like"
                     /note="Immunoglobulin (Ig)-like domain in the polymeric Ig
                     receptor (pIgR) and similar proteins; cd05716"
                     /db_xref="CDD:409381"
     Region          24..40
                     /region_name="FR1"
                     /note="FR1 [structural motif]"
                     /db_xref="CDD:409381"
     Region          27..32
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409381"
     Region          34..41
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409381"
     Region          41..51
                     /region_name="CDR1"
                     /note="CDR1 [structural motif]"
                     /db_xref="CDD:409381"
     Region          51..56
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409381"
     Site            51..53
                     /site_type="other"
                     /note="CDR1-dIgA binding residues [polypeptide binding]"
                     /db_xref="CDD:409381"
     Region          52..56
                     /region_name="FR2"
                     /note="FR2 [structural motif]"
                     /db_xref="CDD:409381"
     Region          57..75
                     /region_name="CDR2"
                     /note="CDR2 [structural motif]"
                     /db_xref="CDD:409381"
     Region          65..69
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409381"
     Region          73..75
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409381"
     Region          81..112
                     /region_name="FR3"
                     /note="FR3 [structural motif]"
                     /db_xref="CDD:409381"
     Region          81..87
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409381"
     Region          91..99
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409381"
     Region          105..112
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409381"
     Region          113..121
                     /region_name="CDR3"
                     /note="CDR3 [structural motif]"
                     /db_xref="CDD:409381"
     Region          136..225
                     /region_name="IgV_pIgR_like"
                     /note="Immunoglobulin (Ig)-like domain in the polymeric Ig
                     receptor (pIgR) and similar proteins; cd05716"
                     /db_xref="CDD:409381"
     Region          136..152
                     /region_name="FR1"
                     /note="FR1 [structural motif]"
                     /db_xref="CDD:409381"
     Region          139..144
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409381"
     Region          146..153
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409381"
     Region          153..161
                     /region_name="CDR1"
                     /note="CDR1 [structural motif]"
                     /db_xref="CDD:409381"
     Region          161..166
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409381"
     Site            161..163
                     /site_type="other"
                     /note="CDR1-dIgA binding residues [polypeptide binding]"
                     /db_xref="CDD:409381"
     Region          162..166
                     /region_name="FR2"
                     /note="FR2 [structural motif]"
                     /db_xref="CDD:409381"
     Region          167..184
                     /region_name="CDR2"
                     /note="CDR2 [structural motif]"
                     /db_xref="CDD:409381"
     Region          174..178
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409381"
     Region          182..184
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409381"
     Region          190..222
                     /region_name="FR3"
                     /note="FR3 [structural motif]"
                     /db_xref="CDD:409381"
     Region          190..196
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409381"
     Region          201..209
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409381"
     Region          215..222
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409381"
     Region          240..340
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          253..257
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          267..271
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          307..311
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          321..326
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          335..338
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          355..457
                     /region_name="IgV_pIgR_like"
                     /note="Immunoglobulin (Ig)-like domain in the polymeric Ig
                     receptor (pIgR) and similar proteins; cd05716"
                     /db_xref="CDD:409381"
     Region          357..370
                     /region_name="FR1"
                     /note="FR1 [structural motif]"
                     /db_xref="CDD:409381"
     Region          357..362
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409381"
     Region          364..371
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409381"
     Region          371..379
                     /region_name="CDR1"
                     /note="CDR1 [structural motif]"
                     /db_xref="CDD:409381"
     Region          379..384
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409381"
     Site            379..381
                     /site_type="other"
                     /note="CDR1-dIgA binding residues [polypeptide binding]"
                     /db_xref="CDD:409381"
     Region          380..384
                     /region_name="FR2"
                     /note="FR2 [structural motif]"
                     /db_xref="CDD:409381"
     Region          385..405
                     /region_name="CDR2"
                     /note="CDR2 [structural motif]"
                     /db_xref="CDD:409381"
     Region          395..399
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409381"
     Region          403..405
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409381"
     Region          411..442
                     /region_name="FR3"
                     /note="FR3 [structural motif]"
                     /db_xref="CDD:409381"
     Region          411..417
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409381"
     Region          421..429
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409381"
     Region          435..442
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409381"
     Region          443..451
                     /region_name="CDR3"
                     /note="CDR3 [structural motif]"
                     /db_xref="CDD:409381"
     Region          451..457
                     /region_name="FR4"
                     /note="FR4 [structural motif]"
                     /db_xref="CDD:409381"
     Region          451..457
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409381"
     Region          463..559
                     /region_name="IgV_pIgR_like"
                     /note="Immunoglobulin (Ig)-like domain in the polymeric Ig
                     receptor (pIgR) and similar proteins; cd05716"
                     /db_xref="CDD:409381"
     Region          463..481
                     /region_name="FR1"
                     /note="FR1 [structural motif]"
                     /db_xref="CDD:409381"
     Region          463..465
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409381"
     Region          468..473
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409381"
     Region          475..482
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409381"
     Region          482..490
                     /region_name="CDR1"
                     /note="CDR1 [structural motif]"
                     /db_xref="CDD:409381"
     Region          490..495
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409381"
     Site            490..492
                     /site_type="other"
                     /note="CDR1-dIgA binding residues [polypeptide binding]"
                     /db_xref="CDD:409381"
     Region          491..495
                     /region_name="FR2"
                     /note="FR2 [structural motif]"
                     /db_xref="CDD:409381"
     Region          496..511
                     /region_name="CDR2"
                     /note="CDR2 [structural motif]"
                     /db_xref="CDD:409381"
     Region          503..507
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409381"
     Region          514..545
                     /region_name="FR3"
                     /note="FR3 [structural motif]"
                     /db_xref="CDD:409381"
     Region          514..520
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409381"
     Region          524..532
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409381"
     Region          538..545
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409381"
     Region          546..554
                     /region_name="CDR3"
                     /note="CDR3 [structural motif]"
                     /db_xref="CDD:409381"
     Region          554..559
                     /region_name="FR4"
                     /note="FR4 [structural motif]"
                     /db_xref="CDD:409381"
     Region          554..559
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409381"
     CDS             1..758
                     /gene="PIGR"
                     /coded_by="XM_061159958.1:212..2488"
                     /db_xref="GeneID:133068971"
ORIGIN      
        1 msrlflacll avfpvvsmks pifgpeevas vegrsvsitc yypptsvnrh trkywcrqga
       61 rghcttliss ggyvssdyvg ranltnfpes gtfvvdishl trndsgrykc glgissrgln
      121 fdvslavsqd paqtsdvhvy pvelgrtvti ncpftkansq kikslcqmig qtcvriidst
      181 gykgsgyaer ahlsilgtdt svfsvvinqi krsdagtyvc qagddakadk snavlqvlep
      241 epeliygdlr ssvtfdctlg pevanmdkfl crqkngeacd vvintlgkka kdfqgrilfq
      301 aktngvvsvh itslrkedag ryvcgaqpeg epqegwpvqv wqlfvneetm ipaspsvvkg
      361 vtggsvtisc pynpkdansl kywcrweeaq ngrcpqlvqs qglvkeqyeg rlallaepgn
      421 gtytvilnql teqdtgfywc vtdgdsrwms tvelkvvgge pslkapknvt awlgepfkls
      481 chfpckfysf ekywckwsnk gcsalptqdd gpsqafvncd qnsqivslnl ntvtkadegw
      541 ywcgvkeghq ygetvavyva venrvkgsqd tkqvkaapgg aaiesrarai eskvipepsf
      601 feeesavrga aggpgapadt srpaehggss kvlvstlvpl glvlaagvva igvvrarhrk
      661 nvdrisirsy rtdismsdfe nsrdfegrdn mgaspeaqet slggkdefat ttedtveske
      721 pkkakrsske eadeafttfl lqannlvsaa tqdgpkea
//
LOCUS       XP_061015942             758 aa            linear   MAM 02-DEC-2023
DEFINITION  polymeric immunoglobulin receptor isoform X2 [Dama dama].
ACCESSION   XP_061015942
VERSION     XP_061015942.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159959.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..758
                     /product="polymeric immunoglobulin receptor isoform X2"
                     /calculated_mol_wt=82259
     Region          24..122
                     /region_name="IgV_pIgR_like"
                     /note="Immunoglobulin (Ig)-like domain in the polymeric Ig
                     receptor (pIgR) and similar proteins; cd05716"
                     /db_xref="CDD:409381"
     Region          24..40
                     /region_name="FR1"
                     /note="FR1 [structural motif]"
                     /db_xref="CDD:409381"
     Region          27..32
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409381"
     Region          34..41
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409381"
     Region          41..51
                     /region_name="CDR1"
                     /note="CDR1 [structural motif]"
                     /db_xref="CDD:409381"
     Region          51..56
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409381"
     Site            51..53
                     /site_type="other"
                     /note="CDR1-dIgA binding residues [polypeptide binding]"
                     /db_xref="CDD:409381"
     Region          52..56
                     /region_name="FR2"
                     /note="FR2 [structural motif]"
                     /db_xref="CDD:409381"
     Region          57..75
                     /region_name="CDR2"
                     /note="CDR2 [structural motif]"
                     /db_xref="CDD:409381"
     Region          65..69
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409381"
     Region          73..75
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409381"
     Region          81..112
                     /region_name="FR3"
                     /note="FR3 [structural motif]"
                     /db_xref="CDD:409381"
     Region          81..87
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409381"
     Region          91..99
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409381"
     Region          105..112
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409381"
     Region          113..121
                     /region_name="CDR3"
                     /note="CDR3 [structural motif]"
                     /db_xref="CDD:409381"
     Region          136..225
                     /region_name="IgV_pIgR_like"
                     /note="Immunoglobulin (Ig)-like domain in the polymeric Ig
                     receptor (pIgR) and similar proteins; cd05716"
                     /db_xref="CDD:409381"
     Region          136..152
                     /region_name="FR1"
                     /note="FR1 [structural motif]"
                     /db_xref="CDD:409381"
     Region          139..144
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409381"
     Region          146..153
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409381"
     Region          153..161
                     /region_name="CDR1"
                     /note="CDR1 [structural motif]"
                     /db_xref="CDD:409381"
     Region          161..166
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409381"
     Site            161..163
                     /site_type="other"
                     /note="CDR1-dIgA binding residues [polypeptide binding]"
                     /db_xref="CDD:409381"
     Region          162..166
                     /region_name="FR2"
                     /note="FR2 [structural motif]"
                     /db_xref="CDD:409381"
     Region          167..184
                     /region_name="CDR2"
                     /note="CDR2 [structural motif]"
                     /db_xref="CDD:409381"
     Region          174..178
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409381"
     Region          182..184
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409381"
     Region          190..222
                     /region_name="FR3"
                     /note="FR3 [structural motif]"
                     /db_xref="CDD:409381"
     Region          190..196
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409381"
     Region          201..209
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409381"
     Region          215..222
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409381"
     Region          240..340
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          253..257
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          267..271
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          307..311
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          321..326
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          335..338
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          355..457
                     /region_name="IgV_pIgR_like"
                     /note="Immunoglobulin (Ig)-like domain in the polymeric Ig
                     receptor (pIgR) and similar proteins; cd05716"
                     /db_xref="CDD:409381"
     Region          357..370
                     /region_name="FR1"
                     /note="FR1 [structural motif]"
                     /db_xref="CDD:409381"
     Region          357..362
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409381"
     Region          364..371
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409381"
     Region          371..379
                     /region_name="CDR1"
                     /note="CDR1 [structural motif]"
                     /db_xref="CDD:409381"
     Region          379..384
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409381"
     Site            379..381
                     /site_type="other"
                     /note="CDR1-dIgA binding residues [polypeptide binding]"
                     /db_xref="CDD:409381"
     Region          380..384
                     /region_name="FR2"
                     /note="FR2 [structural motif]"
                     /db_xref="CDD:409381"
     Region          385..405
                     /region_name="CDR2"
                     /note="CDR2 [structural motif]"
                     /db_xref="CDD:409381"
     Region          395..399
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409381"
     Region          403..405
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409381"
     Region          411..442
                     /region_name="FR3"
                     /note="FR3 [structural motif]"
                     /db_xref="CDD:409381"
     Region          411..417
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409381"
     Region          421..429
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409381"
     Region          435..442
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409381"
     Region          443..451
                     /region_name="CDR3"
                     /note="CDR3 [structural motif]"
                     /db_xref="CDD:409381"
     Region          451..457
                     /region_name="FR4"
                     /note="FR4 [structural motif]"
                     /db_xref="CDD:409381"
     Region          451..457
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409381"
     Region          463..559
                     /region_name="IgV_pIgR_like"
                     /note="Immunoglobulin (Ig)-like domain in the polymeric Ig
                     receptor (pIgR) and similar proteins; cd05716"
                     /db_xref="CDD:409381"
     Region          463..481
                     /region_name="FR1"
                     /note="FR1 [structural motif]"
                     /db_xref="CDD:409381"
     Region          463..465
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409381"
     Region          468..473
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409381"
     Region          475..482
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409381"
     Region          482..490
                     /region_name="CDR1"
                     /note="CDR1 [structural motif]"
                     /db_xref="CDD:409381"
     Region          490..495
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409381"
     Site            490..492
                     /site_type="other"
                     /note="CDR1-dIgA binding residues [polypeptide binding]"
                     /db_xref="CDD:409381"
     Region          491..495
                     /region_name="FR2"
                     /note="FR2 [structural motif]"
                     /db_xref="CDD:409381"
     Region          496..511
                     /region_name="CDR2"
                     /note="CDR2 [structural motif]"
                     /db_xref="CDD:409381"
     Region          503..507
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409381"
     Region          514..545
                     /region_name="FR3"
                     /note="FR3 [structural motif]"
                     /db_xref="CDD:409381"
     Region          514..520
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409381"
     Region          524..532
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409381"
     Region          538..545
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409381"
     Region          546..554
                     /region_name="CDR3"
                     /note="CDR3 [structural motif]"
                     /db_xref="CDD:409381"
     Region          554..559
                     /region_name="FR4"
                     /note="FR4 [structural motif]"
                     /db_xref="CDD:409381"
     Region          554..559
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409381"
     CDS             1..758
                     /gene="PIGR"
                     /coded_by="XM_061159959.1:286..2562"
                     /db_xref="GeneID:133068971"
ORIGIN      
        1 msrlflacll avfpvvsmks pifgpeevas vegrsvsitc yypptsvnrh trkywcrqga
       61 rghcttliss ggyvssdyvg ranltnfpes gtfvvdishl trndsgrykc glgissrgln
      121 fdvslavsqd paqtsdvhvy pvelgrtvti ncpftkansq kikslcqmig qtcvriidst
      181 gykgsgyaer ahlsilgtdt svfsvvinqi krsdagtyvc qagddakadk snavlqvlep
      241 epeliygdlr ssvtfdctlg pevanmdkfl crqkngeacd vvintlgkka kdfqgrilfq
      301 aktngvvsvh itslrkedag ryvcgaqpeg epqegwpvqv wqlfvneetm ipaspsvvkg
      361 vtggsvtisc pynpkdansl kywcrweeaq ngrcpqlvqs qglvkeqyeg rlallaepgn
      421 gtytvilnql teqdtgfywc vtdgdsrwms tvelkvvgge pslkapknvt awlgepfkls
      481 chfpckfysf ekywckwsnk gcsalptqdd gpsqafvncd qnsqivslnl ntvtkadegw
      541 ywcgvkeghq ygetvavyva venrvkgsqd tkqvkaapgg aaiesrarai eskvipepsf
      601 feeesavrga aggpgapadt srpaehggss kvlvstlvpl glvlaagvva igvvrarhrk
      661 nvdrisirsy rtdismsdfe nsrdfegrdn mgaspeaqet slggkdefat ttedtveske
      721 pkkakrsske eadeafttfl lqannlvsaa tqdgpkea
//
LOCUS       XP_061015943             485 aa            linear   MAM 02-DEC-2023
DEFINITION  high affinity immunoglobulin alpha and immunoglobulin mu Fc
            receptor [Dama dama].
ACCESSION   XP_061015943
VERSION     XP_061015943.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159960.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..485
                     /product="high affinity immunoglobulin alpha and
                     immunoglobulin mu Fc receptor"
                     /calculated_mol_wt=51181
     Region          38..143
                     /region_name="IgV_pIgR_like"
                     /note="Immunoglobulin (Ig)-like domain in the polymeric Ig
                     receptor (pIgR) and similar proteins; cd05716"
                     /db_xref="CDD:409381"
     Region          38..56
                     /region_name="FR1"
                     /note="FR1 [structural motif]"
                     /db_xref="CDD:409381"
     Region          38..40
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409381"
     Region          43..48
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409381"
     Region          50..57
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409381"
     Region          57..67
                     /region_name="CDR1"
                     /note="CDR1 [structural motif]"
                     /db_xref="CDD:409381"
     Region          67..72
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409381"
     Site            67..69
                     /site_type="other"
                     /note="CDR1-dIgA binding residues [polypeptide binding]"
                     /db_xref="CDD:409381"
     Region          68..72
                     /region_name="FR2"
                     /note="FR2 [structural motif]"
                     /db_xref="CDD:409381"
     Region          73..92
                     /region_name="CDR2"
                     /note="CDR2 [structural motif]"
                     /db_xref="CDD:409381"
     Region          82..86
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409381"
     Region          90..92
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409381"
     Region          98..129
                     /region_name="FR3"
                     /note="FR3 [structural motif]"
                     /db_xref="CDD:409381"
     Region          98..104
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409381"
     Region          108..116
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409381"
     Region          122..129
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409381"
     Region          130..137
                     /region_name="CDR3"
                     /note="CDR3 [structural motif]"
                     /db_xref="CDD:409381"
     Region          137..143
                     /region_name="FR4"
                     /note="FR4 [structural motif]"
                     /db_xref="CDD:409381"
     Region          137..143
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409381"
     Region          <215..>400
                     /region_name="PRK07003"
                     /note="DNA polymerase III subunit gamma/tau"
                     /db_xref="CDD:235906"
     CDS             1..485
                     /gene="FCAMR"
                     /coded_by="XM_061159960.1:1202..2659"
                     /db_xref="GeneID:133068972"
ORIGIN      
        1 mglespakpg dpkvtsqrag wrmllfllmc llqaasalkg prlvsgepgg avtiqcwypr
       61 lainshqrky wcrlgppagv crtvvstnry thlryrgrva ladfpqrglf vvrlsrlspe
      121 degryrcglg ssnnalffsm nltvspglsr tiptatlayg elitesseta sppaaktctq
      181 antqttgrqt tgwdtvaltp garktmasat erqtpgptat vapgtgsqve rsvratvptv
      241 qspastgrgv tsaaarglvw stgdseatra raskrkrett pgadrpreet esvsttpgta
      301 etatgtirps tlaserwmwe tlqeetsase pqslgsiegt tpavavwtse pthvemasae
      361 gsgevdldtp agdggpqvmp sqalaagppg ppakessvks apleeknfsg iltpvssalc
      421 plllvtlvlw krklqkkrss qktgkspgvt liqmtqvpdl glqpaqppqv grkrlqadsp
      481 plhaa
//
LOCUS       XP_061015945             590 aa            linear   MAM 02-DEC-2023
DEFINITION  specifically androgen-regulated gene protein [Dama dama].
ACCESSION   XP_061015945
VERSION     XP_061015945.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159962.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..590
                     /product="specifically androgen-regulated gene protein"
                     /calculated_mol_wt=61942
     Region          40..590
                     /region_name="SARG"
                     /note="Specifically androgen-regulated gene protein;
                     pfam15385"
                     /db_xref="CDD:464692"
     CDS             1..590
                     /gene="C14H1orf116"
                     /coded_by="XM_061159962.1:237..2009"
                     /db_xref="GeneID:133068974"
ORIGIN      
        1 mperelwpag pglepatrvg scdsmmstts arsgssdssy dflsaeekec llfleetigs
       61 ldaeadsgls tgeseqattp rgpralpptq papqghpeet tvrgpepkrv tpfssahppr
      121 pqslglrsgs sslprnihig rnqnlrksst ltnshnpggs eglvsgpeta rvsqspeysq
      181 aaleldgpli pppeafqdaq peqrgqgslp rgpgelsprp qahpslssqr nrepapeams
      241 qkasekgstg epappgsppl vssrdagard aavpsaghpn grpapvtapk prklppnivl
      301 kssrgsfhsd pqnrlsrrse aapgdpspas sslqeqrkar realeklglp qdqeepsprl
      361 srpsvrlket gaqavspapa qvpgralapa ptrgpspgka palaqppspg kvpvpsqept
      421 qgtapaakst pipipkgpra qspltqrkpd sgltlqesgv pglrqmsfks stlersgigl
      481 ssylsaekap spqtstslek gslldrisps vlrnsrprpa slgtgkdfeg irvgkladle
      541 qegrpkhlsy qgpsrdklpr ppcvsvrisp kgvsdehrre alkklgllke
//
LOCUS       XP_061015946             590 aa            linear   MAM 02-DEC-2023
DEFINITION  specifically androgen-regulated gene protein [Dama dama].
ACCESSION   XP_061015946
VERSION     XP_061015946.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159963.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..590
                     /product="specifically androgen-regulated gene protein"
                     /calculated_mol_wt=61942
     Region          40..590
                     /region_name="SARG"
                     /note="Specifically androgen-regulated gene protein;
                     pfam15385"
                     /db_xref="CDD:464692"
     CDS             1..590
                     /gene="C14H1orf116"
                     /coded_by="XM_061159963.1:296..2068"
                     /db_xref="GeneID:133068974"
ORIGIN      
        1 mperelwpag pglepatrvg scdsmmstts arsgssdssy dflsaeekec llfleetigs
       61 ldaeadsgls tgeseqattp rgpralpptq papqghpeet tvrgpepkrv tpfssahppr
      121 pqslglrsgs sslprnihig rnqnlrksst ltnshnpggs eglvsgpeta rvsqspeysq
      181 aaleldgpli pppeafqdaq peqrgqgslp rgpgelsprp qahpslssqr nrepapeams
      241 qkasekgstg epappgsppl vssrdagard aavpsaghpn grpapvtapk prklppnivl
      301 kssrgsfhsd pqnrlsrrse aapgdpspas sslqeqrkar realeklglp qdqeepsprl
      361 srpsvrlket gaqavspapa qvpgralapa ptrgpspgka palaqppspg kvpvpsqept
      421 qgtapaakst pipipkgpra qspltqrkpd sgltlqesgv pglrqmsfks stlersgigl
      481 ssylsaekap spqtstslek gslldrisps vlrnsrprpa slgtgkdfeg irvgkladle
      541 qegrpkhlsy qgpsrdklpr ppcvsvrisp kgvsdehrre alkklgllke
//
LOCUS       XP_061015947             535 aa            linear   MAM 02-DEC-2023
DEFINITION  6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2 isoform X1
            [Dama dama].
ACCESSION   XP_061015947
VERSION     XP_061015947.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159964.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..535
                     /product="6-phosphofructo-2-kinase/fructose-2,
                     6-bisphosphatase 2 isoform X1"
                     /calculated_mol_wt=61107
     Region          27..250
                     /region_name="6PF2K"
                     /note="6-phosphofructo-2-kinase; pfam01591"
                     /db_xref="CDD:396253"
     Region          253..436
                     /region_name="His_Phos_1"
                     /note="Histidine phosphatase superfamily (branch 1);
                     pfam00300"
                     /db_xref="CDD:459751"
     CDS             1..535
                     /gene="PFKFB2"
                     /coded_by="XM_061159964.1:159..1766"
                     /db_xref="GeneID:133068975"
ORIGIN      
        1 msgnpassse qnnnsyetka nlrmsekkcs wasymtnspt livmiglpar gktyvskklt
       61 rylnwigvpt kvfnlgvyrr qavksyksyd ffrhdneeam kirkqcalva ledvkaylte
      121 esgqiavfda tnttrerrdl ilnfaeensf kvffvesvcd dpdviaanil evkvsspdyp
      181 ernrenvmdd flkriecykv tyqpldpdsh dkdlsfikvi nvgqrflvnk vqdyiqskiv
      241 yylmnihvhp rtiylcrhge sefnlvgkig gdsglsargk qfaqalrkfl eeqeiadlkv
      301 wtsqlkrtiq taeslgvtye qwkilneida gvceemtyae iqerypdefa lrdeekylyr
      361 ypggesyqdl vqrlepvime lerqgnvlvi shqavmrcll ayfldkgade lpylrcplht
      421 ifrltpvayg ckvetiklnv eavnthrdkp tnnfpksqtp vrmrrnsftp lsssntirrp
      481 rnysvgsrpl qplsplrald tqegadqpkt qvsipaetsr aahrlpspap pasps
//
LOCUS       XP_061015948             535 aa            linear   MAM 02-DEC-2023
DEFINITION  6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2 isoform X1
            [Dama dama].
ACCESSION   XP_061015948
VERSION     XP_061015948.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159965.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..535
                     /product="6-phosphofructo-2-kinase/fructose-2,
                     6-bisphosphatase 2 isoform X1"
                     /calculated_mol_wt=61107
     Region          27..250
                     /region_name="6PF2K"
                     /note="6-phosphofructo-2-kinase; pfam01591"
                     /db_xref="CDD:396253"
     Region          253..436
                     /region_name="His_Phos_1"
                     /note="Histidine phosphatase superfamily (branch 1);
                     pfam00300"
                     /db_xref="CDD:459751"
     CDS             1..535
                     /gene="PFKFB2"
                     /coded_by="XM_061159965.1:100..1707"
                     /db_xref="GeneID:133068975"
ORIGIN      
        1 msgnpassse qnnnsyetka nlrmsekkcs wasymtnspt livmiglpar gktyvskklt
       61 rylnwigvpt kvfnlgvyrr qavksyksyd ffrhdneeam kirkqcalva ledvkaylte
      121 esgqiavfda tnttrerrdl ilnfaeensf kvffvesvcd dpdviaanil evkvsspdyp
      181 ernrenvmdd flkriecykv tyqpldpdsh dkdlsfikvi nvgqrflvnk vqdyiqskiv
      241 yylmnihvhp rtiylcrhge sefnlvgkig gdsglsargk qfaqalrkfl eeqeiadlkv
      301 wtsqlkrtiq taeslgvtye qwkilneida gvceemtyae iqerypdefa lrdeekylyr
      361 ypggesyqdl vqrlepvime lerqgnvlvi shqavmrcll ayfldkgade lpylrcplht
      421 ifrltpvayg ckvetiklnv eavnthrdkp tnnfpksqtp vrmrrnsftp lsssntirrp
      481 rnysvgsrpl qplsplrald tqegadqpkt qvsipaetsr aahrlpspap pasps
//
LOCUS       XP_061015949             535 aa            linear   MAM 02-DEC-2023
DEFINITION  6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2 isoform X1
            [Dama dama].
ACCESSION   XP_061015949
VERSION     XP_061015949.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159966.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..535
                     /product="6-phosphofructo-2-kinase/fructose-2,
                     6-bisphosphatase 2 isoform X1"
                     /calculated_mol_wt=61107
     Region          27..250
                     /region_name="6PF2K"
                     /note="6-phosphofructo-2-kinase; pfam01591"
                     /db_xref="CDD:396253"
     Region          253..436
                     /region_name="His_Phos_1"
                     /note="Histidine phosphatase superfamily (branch 1);
                     pfam00300"
                     /db_xref="CDD:459751"
     CDS             1..535
                     /gene="PFKFB2"
                     /coded_by="XM_061159966.1:127..1734"
                     /db_xref="GeneID:133068975"
ORIGIN      
        1 msgnpassse qnnnsyetka nlrmsekkcs wasymtnspt livmiglpar gktyvskklt
       61 rylnwigvpt kvfnlgvyrr qavksyksyd ffrhdneeam kirkqcalva ledvkaylte
      121 esgqiavfda tnttrerrdl ilnfaeensf kvffvesvcd dpdviaanil evkvsspdyp
      181 ernrenvmdd flkriecykv tyqpldpdsh dkdlsfikvi nvgqrflvnk vqdyiqskiv
      241 yylmnihvhp rtiylcrhge sefnlvgkig gdsglsargk qfaqalrkfl eeqeiadlkv
      301 wtsqlkrtiq taeslgvtye qwkilneida gvceemtyae iqerypdefa lrdeekylyr
      361 ypggesyqdl vqrlepvime lerqgnvlvi shqavmrcll ayfldkgade lpylrcplht
      421 ifrltpvayg ckvetiklnv eavnthrdkp tnnfpksqtp vrmrrnsftp lsssntirrp
      481 rnysvgsrpl qplsplrald tqegadqpkt qvsipaetsr aahrlpspap pasps
//
LOCUS       XP_061015950             531 aa            linear   MAM 02-DEC-2023
DEFINITION  6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2 isoform X2
            [Dama dama].
ACCESSION   XP_061015950
VERSION     XP_061015950.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159967.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..531
                     /product="6-phosphofructo-2-kinase/fructose-2,
                     6-bisphosphatase 2 isoform X2"
                     /calculated_mol_wt=60710
     Region          27..250
                     /region_name="6PF2K"
                     /note="6-phosphofructo-2-kinase; pfam01591"
                     /db_xref="CDD:396253"
     Region          253..436
                     /region_name="His_Phos_1"
                     /note="Histidine phosphatase superfamily (branch 1);
                     pfam00300"
                     /db_xref="CDD:459751"
     CDS             1..531
                     /gene="PFKFB2"
                     /coded_by="XM_061159967.1:159..1754"
                     /db_xref="GeneID:133068975"
ORIGIN      
        1 msgnpassse qnnnsyetka nlrmsekkcs wasymtnspt livmiglpar gktyvskklt
       61 rylnwigvpt kvfnlgvyrr qavksyksyd ffrhdneeam kirkqcalva ledvkaylte
      121 esgqiavfda tnttrerrdl ilnfaeensf kvffvesvcd dpdviaanil evkvsspdyp
      181 ernrenvmdd flkriecykv tyqpldpdsh dkdlsfikvi nvgqrflvnk vqdyiqskiv
      241 yylmnihvhp rtiylcrhge sefnlvgkig gdsglsargk qfaqalrkfl eeqeiadlkv
      301 wtsqlkrtiq taeslgvtye qwkilneida gvceemtyae iqerypdefa lrdeekylyr
      361 ypggesyqdl vqrlepvime lerqgnvlvi shqavmrcll ayfldkgade lpylrcplht
      421 ifrltpvayg ckvetiklnv eavnthrdkp tnnfpksqtp vrmrrnsftp lsssntirrp
      481 rnysvgsrpl qplsplrald tqegadqpkt qaetsraahr lpspappasp s
//
LOCUS       XP_061015952             471 aa            linear   MAM 02-DEC-2023
DEFINITION  6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2 isoform X3
            [Dama dama].
ACCESSION   XP_061015952
VERSION     XP_061015952.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159969.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..471
                     /product="6-phosphofructo-2-kinase/fructose-2,
                     6-bisphosphatase 2 isoform X3"
                     /calculated_mol_wt=53933
     Region          27..250
                     /region_name="6PF2K"
                     /note="6-phosphofructo-2-kinase; pfam01591"
                     /db_xref="CDD:396253"
     Region          253..436
                     /region_name="His_Phos_1"
                     /note="Histidine phosphatase superfamily (branch 1);
                     pfam00300"
                     /db_xref="CDD:459751"
     CDS             1..471
                     /gene="PFKFB2"
                     /coded_by="XM_061159969.1:159..1574"
                     /db_xref="GeneID:133068975"
ORIGIN      
        1 msgnpassse qnnnsyetka nlrmsekkcs wasymtnspt livmiglpar gktyvskklt
       61 rylnwigvpt kvfnlgvyrr qavksyksyd ffrhdneeam kirkqcalva ledvkaylte
      121 esgqiavfda tnttrerrdl ilnfaeensf kvffvesvcd dpdviaanil evkvsspdyp
      181 ernrenvmdd flkriecykv tyqpldpdsh dkdlsfikvi nvgqrflvnk vqdyiqskiv
      241 yylmnihvhp rtiylcrhge sefnlvgkig gdsglsargk qfaqalrkfl eeqeiadlkv
      301 wtsqlkrtiq taeslgvtye qwkilneida gvceemtyae iqerypdefa lrdeekylyr
      361 ypggesyqdl vqrlepvime lerqgnvlvi shqavmrcll ayfldkgade lpylrcplht
      421 ifrltpvayg ckvetiklnv eavnthrdkp taetsraahr lpspappasp s
//
LOCUS       XP_061015953             348 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin thioesterase OTU1 isoform X1 [Dama dama].
ACCESSION   XP_061015953
VERSION     XP_061015953.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159970.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..348
                     /product="ubiquitin thioesterase OTU1 isoform X1"
                     /calculated_mol_wt=37977
     Region          47..121
                     /region_name="Ubl_OTU1"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin
                     thioesterase OTU1 and similar proteins; cd17059"
                     /db_xref="CDD:340579"
     Site            order(50,59,90,93,95,97,113..117,121)
                     /site_type="other"
                     /note="VCP interaction site [polypeptide binding]"
                     /db_xref="CDD:340579"
     Region          148..307
                     /region_name="OTU_OTU1"
                     /note="OTU (ovarian tumor) domain of ubiquitin
                     thioesterase OTU1 and similar proteins; cd22745"
                     /db_xref="CDD:438582"
     Site            order(160,200..201,203,209,212,219..224,245,247,249..252,
                     263,265..268)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438582"
     CDS             1..348
                     /gene="YOD1"
                     /coded_by="XM_061159970.1:19..1065"
                     /db_xref="GeneID:133068976"
ORIGIN      
        1 mfrpakgghf gvhpaagcpg gvcqpaagtk agptgvcpvg grtnamwrlr ckakegthvl
       61 qglssrtrvr elqgqiaait gispgcqril vgyppecldl sngdtilgdl piqsgdmliv
      121 eedqsrpkts ptftkygaps yvretlpvlt rmavpadnsc lftsvyyvve ggvlnpacap
      181 emrrliaqiv asdpdfysea ilgktneeyc dwikrddtwg gaieisilsk fyqceicvvd
      241 tqtvridrfg edagytkrvl liydgihydp lqhvfpdpdt ppltifssyd divlvqalel
      301 adearkkrqf tdvnrftlrc mvcqkgltgq aeardhaket ghtnfgev
//
LOCUS       XP_061015954             304 aa            linear   MAM 02-DEC-2023
DEFINITION  ubiquitin thioesterase OTU1 isoform X2 [Dama dama].
ACCESSION   XP_061015954
VERSION     XP_061015954.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159971.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..304
                     /product="ubiquitin thioesterase OTU1 isoform X2"
                     /calculated_mol_wt=33811
     Region          13..77
                     /region_name="Ubl_OTU1"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin
                     thioesterase OTU1 and similar proteins; cd17059"
                     /db_xref="CDD:340579"
     Site            order(15,46,49,51,53,69..73,77)
                     /site_type="other"
                     /note="VCP interaction site [polypeptide binding]"
                     /db_xref="CDD:340579"
     Region          104..263
                     /region_name="OTU_OTU1"
                     /note="OTU (ovarian tumor) domain of ubiquitin
                     thioesterase OTU1 and similar proteins; cd22745"
                     /db_xref="CDD:438582"
     Site            order(116,156..157,159,165,168,175..180,201,203,205..208,
                     219,221..224)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438582"
     CDS             1..304
                     /gene="YOD1"
                     /coded_by="XM_061159971.1:1..915"
                     /db_xref="GeneID:133068976"
ORIGIN      
        1 mlcfhiiyse aetftvlgls srtrvrelqg qiaaitgisp gcqrilvgyp pecldlsngd
       61 tilgdlpiqs gdmliveedq srpktsptft kygapsyvre tlpvltrmav padnsclfts
      121 vyyvveggvl npacapemrr liaqivasdp dfyseailgk tneeycdwik rddtwggaie
      181 isilskfyqc eicvvdtqtv ridrfgedag ytkrvlliyd gihydplqhv fpdpdtpplt
      241 ifssyddivl vqaleladea rkkrqftdvn rftlrcmvcq kgltgqaear dhaketghtn
      301 fgev
//
LOCUS       XP_061015955             198 aa            linear   MAM 02-DEC-2023
DEFINITION  C4b-binding protein beta chain [Dama dama].
ACCESSION   XP_061015955
VERSION     XP_061015955.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159972.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..198
                     /product="C4b-binding protein beta chain"
                     /calculated_mol_wt=22782
     Region          <23..>143
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     CDS             1..198
                     /gene="C4BPB"
                     /coded_by="XM_061159972.1:370..966"
                     /db_xref="GeneID:133068977"
ORIGIN      
        1 mffwlmcylv dvwlisasdv ghcpdpllvt defsslepvn vndtimfkcn ehcilkgsnw
       61 sqcqenhtwv thfpvcksrd cgppetpthg yfegrdfksg stityycear yrlvgtqhqq
      121 cidgewtstp piceliqeap kpaeleleka flafqeskel ckaikkftqr lkksdltmek
      181 vkyflerkka klkakmlp
//
LOCUS       XP_061015956             198 aa            linear   MAM 02-DEC-2023
DEFINITION  C4b-binding protein beta chain [Dama dama].
ACCESSION   XP_061015956
VERSION     XP_061015956.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159973.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..198
                     /product="C4b-binding protein beta chain"
                     /calculated_mol_wt=22782
     Region          <23..>143
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     CDS             1..198
                     /gene="C4BPB"
                     /coded_by="XM_061159973.1:319..915"
                     /db_xref="GeneID:133068977"
ORIGIN      
        1 mffwlmcylv dvwlisasdv ghcpdpllvt defsslepvn vndtimfkcn ehcilkgsnw
       61 sqcqenhtwv thfpvcksrd cgppetpthg yfegrdfksg stityycear yrlvgtqhqq
      121 cidgewtstp piceliqeap kpaeleleka flafqeskel ckaikkftqr lkksdltmek
      181 vkyflerkka klkakmlp
//
LOCUS       XP_061015957             681 aa            linear   MAM 02-DEC-2023
DEFINITION  C4b-binding protein alpha chain isoform X1 [Dama dama].
ACCESSION   XP_061015957
VERSION     XP_061015957.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159974.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..681
                     /product="C4b-binding protein alpha chain isoform X1"
                     /calculated_mol_wt=75740
     Region          106..365
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          395..610
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          613..661
                     /region_name="C4bp_oligo"
                     /note="Oligomerization domain of C4b-binding protein
                     alpha; pfam18453"
                     /db_xref="CDD:436513"
     CDS             1..681
                     /gene="C4BPA"
                     /coded_by="XM_061159974.1:16..2061"
                     /db_xref="GeneID:133068978"
ORIGIN      
        1 mlpgpimrfl sdpmawvclq rshprawpha vllcpqhcvc ghdvnlspqq gvwmcvwlpv
       61 sschglcrkm smkhqrvpav irhskgtmas wpfsrlwsis dpilfqvtlv atllatvlgs
      121 cgippylefa ypvnelnett fetgttlryn crpgyrissk sysltcevtg nwkyrefcvk
      181 krcgnpgell ngqvivktdy sfgseiefsc segyiligsa nsyceiqdkg vgwsdplpqc
      241 iiakcepppt isngrhnggd edfytygssi tyscdpdfsm lgqasiscrv enktigvwsp
      301 sppsckkvic vqpvvkdgki tsgfgptyty qqsivyacdk gfrlegnsli rceadnswnp
      361 ppptcelngc vglphiphas wgrygyrtqt kqevhdigtv lryscdsgyr pkadgpttvt
      421 cqsdlkwspy ieceevccpv pnlnndgsit lrrrhstgth ciyfsgdeis fschnkhisq
      481 atctkygtws pripecspdc esppgiahgq hkivskyfer eaeykcdegy ilvganrlsc
      541 tssgwspatp qckalclkpt iehgrlsvek vryveperit iqcksgyrlv gsenitcsed
      601 rtwspaapkc eweypegceq vitgrkllqc lsspeevkla levyklslei allelqidkp
      661 kdasleaser ekyvpaafnp i
//
LOCUS       XP_061015958             668 aa            linear   MAM 02-DEC-2023
DEFINITION  C4b-binding protein alpha chain isoform X2 [Dama dama].
ACCESSION   XP_061015958
VERSION     XP_061015958.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159975.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..668
                     /product="C4b-binding protein alpha chain isoform X2"
                     /calculated_mol_wt=74284
     Region          93..352
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          382..597
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          600..648
                     /region_name="C4bp_oligo"
                     /note="Oligomerization domain of C4b-binding protein
                     alpha; pfam18453"
                     /db_xref="CDD:436513"
     CDS             1..668
                     /gene="C4BPA"
                     /coded_by="XM_061159975.1:220..2226"
                     /db_xref="GeneID:133068978"
ORIGIN      
        1 mawvclqrsh prawphavll cpqhcvcghd vnlspqqgvw mcvwlpvssc hglcrkmsmk
       61 hqrvpavirh skgtmaswpf srlwsisdpi lfqvtlvatl latvlgscgi ppylefaypv
      121 nelnettfet gttlryncrp gyrissksys ltcevtgnwk yrefcvkkrc gnpgellngq
      181 vivktdysfg seiefscseg yiligsansy ceiqdkgvgw sdplpqciia kceppptisn
      241 grhnggdedf ytygssitys cdpdfsmlgq asiscrvenk tigvwspspp sckkvicvqp
      301 vvkdgkitsg fgptytyqqs ivyacdkgfr legnslirce adnswnpppp tcelngcvgl
      361 phiphaswgr ygyrtqtkqe vhdigtvlry scdsgyrpka dgpttvtcqs dlkwspyiec
      421 eevccpvpnl nndgsitlrr rhstgthciy fsgdeisfsc hnkhisqatc tkygtwspri
      481 pecspdcesp pgiahgqhki vskyfereae ykcdegyilv ganrlsctss gwspatpqck
      541 alclkptieh grlsvekvry veperitiqc ksgyrlvgse nitcsedrtw spaapkcewe
      601 ypegceqvit grkllqclss peevklalev yklsleiall elqidkpkda sleasereky
      661 vpaafnpi
//
LOCUS       XP_061015959             628 aa            linear   MAM 02-DEC-2023
DEFINITION  C4b-binding protein alpha chain isoform X3 [Dama dama].
ACCESSION   XP_061015959
VERSION     XP_061015959.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159976.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..628
                     /product="C4b-binding protein alpha chain isoform X3"
                     /calculated_mol_wt=69627
     Region          53..312
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          342..557
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          560..608
                     /region_name="C4bp_oligo"
                     /note="Oligomerization domain of C4b-binding protein
                     alpha; pfam18453"
                     /db_xref="CDD:436513"
     CDS             1..628
                     /gene="C4BPA"
                     /coded_by="XM_061159976.1:169..2055"
                     /db_xref="GeneID:133068978"
ORIGIN      
        1 miessssavc ssfsrkmsmk hqrvpavirh skgtmaswpf srlwsisdpi lfqvtlvatl
       61 latvlgscgi ppylefaypv nelnettfet gttlryncrp gyrissksys ltcevtgnwk
      121 yrefcvkkrc gnpgellngq vivktdysfg seiefscseg yiligsansy ceiqdkgvgw
      181 sdplpqciia kceppptisn grhnggdedf ytygssitys cdpdfsmlgq asiscrvenk
      241 tigvwspspp sckkvicvqp vvkdgkitsg fgptytyqqs ivyacdkgfr legnslirce
      301 adnswnpppp tcelngcvgl phiphaswgr ygyrtqtkqe vhdigtvlry scdsgyrpka
      361 dgpttvtcqs dlkwspyiec eevccpvpnl nndgsitlrr rhstgthciy fsgdeisfsc
      421 hnkhisqatc tkygtwspri pecspdcesp pgiahgqhki vskyfereae ykcdegyilv
      481 ganrlsctss gwspatpqck alclkptieh grlsvekvry veperitiqc ksgyrlvgse
      541 nitcsedrtw spaapkcewe ypegceqvit grkllqclss peevklalev yklsleiall
      601 elqidkpkda sleasereky vpaafnpi
//
LOCUS       XP_061015960             625 aa            linear   MAM 02-DEC-2023
DEFINITION  C4b-binding protein alpha chain isoform X4 [Dama dama].
ACCESSION   XP_061015960
VERSION     XP_061015960.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159977.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..625
                     /product="C4b-binding protein alpha chain isoform X4"
                     /calculated_mol_wt=69306
     Region          50..309
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          339..554
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          557..605
                     /region_name="C4bp_oligo"
                     /note="Oligomerization domain of C4b-binding protein
                     alpha; pfam18453"
                     /db_xref="CDD:436513"
     CDS             1..625
                     /gene="C4BPA"
                     /coded_by="XM_061159977.1:169..2046"
                     /db_xref="GeneID:133068978"
ORIGIN      
        1 miessssavc srkmsmkhqr vpavirhskg tmaswpfsrl wsisdpilfq vtlvatllat
       61 vlgscgippy lefaypvnel nettfetgtt lryncrpgyr issksysltc evtgnwkyre
      121 fcvkkrcgnp gellngqviv ktdysfgsei efscsegyil igsansycei qdkgvgwsdp
      181 lpqciiakce ppptisngrh nggdedfyty gssityscdp dfsmlgqasi scrvenktig
      241 vwspsppsck kvicvqpvvk dgkitsgfgp tytyqqsivy acdkgfrleg nslirceadn
      301 swnpppptce lngcvglphi phaswgrygy rtqtkqevhd igtvlryscd sgyrpkadgp
      361 ttvtcqsdlk wspyieceev ccpvpnlnnd gsitlrrrhs tgthciyfsg deisfschnk
      421 hisqatctky gtwspripec spdcesppgi ahgqhkivsk yfereaeykc degyilvgan
      481 rlsctssgws patpqckalc lkptiehgrl svekvryvep eritiqcksg yrlvgsenit
      541 csedrtwspa apkceweype gceqvitgrk llqclsspee vklalevykl sleiallelq
      601 idkpkdasle aserekyvpa afnpi
//
LOCUS       XP_061015962             624 aa            linear   MAM 02-DEC-2023
DEFINITION  C4b-binding protein alpha chain isoform X5 [Dama dama].
ACCESSION   XP_061015962
VERSION     XP_061015962.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159979.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..624
                     /product="C4b-binding protein alpha chain isoform X5"
                     /calculated_mol_wt=69219
     Region          49..308
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          338..553
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          556..604
                     /region_name="C4bp_oligo"
                     /note="Oligomerization domain of C4b-binding protein
                     alpha; pfam18453"
                     /db_xref="CDD:436513"
     CDS             1..624
                     /gene="C4BPA"
                     /coded_by="XM_061159979.1:169..2043"
                     /db_xref="GeneID:133068978"
ORIGIN      
        1 miessssavc rkmsmkhqrv pavirhskgt maswpfsrlw sisdpilfqv tlvatllatv
       61 lgscgippyl efaypvneln ettfetgttl ryncrpgyri ssksysltce vtgnwkyref
      121 cvkkrcgnpg ellngqvivk tdysfgseie fscsegyili gsansyceiq dkgvgwsdpl
      181 pqciiakcep pptisngrhn ggdedfytyg ssityscdpd fsmlgqasis crvenktigv
      241 wspsppsckk vicvqpvvkd gkitsgfgpt ytyqqsivya cdkgfrlegn slirceadns
      301 wnpppptcel ngcvglphip haswgrygyr tqtkqevhdi gtvlryscds gyrpkadgpt
      361 tvtcqsdlkw spyieceevc cpvpnlnndg sitlrrrhst gthciyfsgd eisfschnkh
      421 isqatctkyg twspripecs pdcesppgia hgqhkivsky fereaeykcd egyilvganr
      481 lsctssgwsp atpqckalcl kptiehgrls vekvryvepe ritiqcksgy rlvgsenitc
      541 sedrtwspaa pkceweypeg ceqvitgrkl lqclsspeev klalevykls leiallelqi
      601 dkpkdaslea serekyvpaa fnpi
//
LOCUS       XP_061015963            1472 aa            linear   MAM 02-DEC-2023
DEFINITION  complement receptor type 2 isoform X1 [Dama dama].
ACCESSION   XP_061015963
VERSION     XP_061015963.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159980.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1472
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1472
                     /product="complement receptor type 2 isoform X1"
                     /calculated_mol_wt=161888
     Region          10..274
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          295..524
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          549..784
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          729..1035
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          1061..1283
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          <1216..1406
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     CDS             1..1472
                     /gene="CR2"
                     /coded_by="XM_061159980.1:109..4527"
                     /db_xref="GeneID:133068979"
ORIGIN      
        1 mgaagpiwvf ltllapgvlg qckslprypf akpkiqsdqs efavgetwey eclpgyfkks
       61 fivtclktsk wsnaqqvckr kpcsvprell hgsvhtpqgi mfgaritfsc dngyrliggs
      121 satcvfldnt vtwdtdlplc esipcepppa ilngdfyssn rdyfyygmvv tyqchvgqng
      181 kklfdlvgek siyctskdnq vgiwnspapq cipvvkcpip evengimesg frhsfslnds
      241 vmfkckpgft mkgsntvrcq pnskwnpplp kcfkgclppp htlhgnydql deeffavgqe
      301 vfyscepgyt ligtnpirct slgtwshlvp kcevkscddi pnqllngrvv tppnfqlgae
      361 vsfvcdkgfr lngqsssqcv segmrvfwsn kfpvcerifc dpppsikngr ssyhsgpval
      421 navvtyscps afrligekrl fciskdnvng iwdkappice yynrdsvcse pivpggyrik
      481 tsrppfrhgh svtfscyanf tmkgnktvwc qanrtwgptp lpicesdipv ecpspptian
      541 ghhtgesvas fapgltvtys cepgylifgk ntihclslgd wsdaaptcke alcepprpfl
      601 ngqikrptsf gvgatvnfsc negyrlqgpl ssqcvivgqr tfwtrmptce eifcpspppv
      661 lngrhtgtss vifpyghtvs ytcdpgpekg vsfiligert ihcttgsqkt gawsgpaprc
      721 elsvsevwcp ppqiprgqis sgqkdrysyn dtvvfacvfg ftmkgskavr cnaqgtweps
      781 ipvcekdcqa ppkilhgrke drhrvrfdpg tsikyscdlg yvlvgeesir ctpdgvwipt
      841 aptckvaece pvgkqvfkkp knqfirpdvn sscdegyrlg esvyqqcqgt ipwfmeirlc
      901 kditcppppa idngvhtgss sevvlygttv tytcnpgper gvkydliges tircisndqe
      961 tgiwsgpapt cnislpavqc spvnvanghk isgkeapysy ndsvilecdd gfilkgssqv
     1021 rckanntwdp eipvcekgcq ppsglhhgqh tggnrvlfvs gmtvdytcdp gyllvgnrsi
     1081 qcmpsgnwsp svprceeasc qplkdgqepp dgslvipvnt scqdgyrktg qhtyqkcqdd
     1141 enavwfqkip lceiincqsp pgikngrhrs vlandfqygn evfyecdqgf dllgeksirc
     1201 isdseghvfw sgpapqcvks spvthcpdpe vmhgkkinkt qspyshndil hiacnpgfim
     1261 ngshlircht nnkwvpgvpt cirkafvgcq rpfrishgnh tggditrfsp gmsilyscdq
     1321 gyllvgeall lctyegtwnr papyckevnc sfpehtngiq nglepgrmyq ygavvtlvce
     1381 dgytlegspq sqcqedhrwn pplavcksps slapliagfs agvvalfclg avtlrmilkh
     1441 rernyytntn hkedvhleal dlysvdpysp an
//
LOCUS       XP_061015964            1422 aa            linear   MAM 02-DEC-2023
DEFINITION  complement receptor type 2 isoform X2 [Dama dama].
ACCESSION   XP_061015964
VERSION     XP_061015964.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159981.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1422
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1422
                     /product="complement receptor type 2 isoform X2"
                     /calculated_mol_wt=156624
     Region          <64..224
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          245..474
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          499..734
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          679..985
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          1011..1233
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          <1166..1356
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     CDS             1..1422
                     /gene="CR2"
                     /coded_by="XM_061159981.1:145..4413"
                     /db_xref="GeneID:133068979"
ORIGIN      
        1 mlsksvnvnh vrflenssma lsthlrvscl gpelhfhvtm vgkelsfskt sswemithlf
       61 ifryrliggs satcvfldnt vtwdtdlplc esipcepppa ilngdfyssn rdyfyygmvv
      121 tyqchvgqng kklfdlvgek siyctskdnq vgiwnspapq cipvvkcpip evengimesg
      181 frhsfslnds vmfkckpgft mkgsntvrcq pnskwnpplp kcfkgclppp htlhgnydql
      241 deeffavgqe vfyscepgyt ligtnpirct slgtwshlvp kcevkscddi pnqllngrvv
      301 tppnfqlgae vsfvcdkgfr lngqsssqcv segmrvfwsn kfpvcerifc dpppsikngr
      361 ssyhsgpval navvtyscps afrligekrl fciskdnvng iwdkappice yynrdsvcse
      421 pivpggyrik tsrppfrhgh svtfscyanf tmkgnktvwc qanrtwgptp lpicesdipv
      481 ecpspptian ghhtgesvas fapgltvtys cepgylifgk ntihclslgd wsdaaptcke
      541 alcepprpfl ngqikrptsf gvgatvnfsc negyrlqgpl ssqcvivgqr tfwtrmptce
      601 eifcpspppv lngrhtgtss vifpyghtvs ytcdpgpekg vsfiligert ihcttgsqkt
      661 gawsgpaprc elsvsevwcp ppqiprgqis sgqkdrysyn dtvvfacvfg ftmkgskavr
      721 cnaqgtweps ipvcekdcqa ppkilhgrke drhrvrfdpg tsikyscdlg yvlvgeesir
      781 ctpdgvwipt aptckvaece pvgkqvfkkp knqfirpdvn sscdegyrlg esvyqqcqgt
      841 ipwfmeirlc kditcppppa idngvhtgss sevvlygttv tytcnpgper gvkydliges
      901 tircisndqe tgiwsgpapt cnislpavqc spvnvanghk isgkeapysy ndsvilecdd
      961 gfilkgssqv rckanntwdp eipvcekgcq ppsglhhgqh tggnrvlfvs gmtvdytcdp
     1021 gyllvgnrsi qcmpsgnwsp svprceeasc qplkdgqepp dgslvipvnt scqdgyrktg
     1081 qhtyqkcqdd enavwfqkip lceiincqsp pgikngrhrs vlandfqygn evfyecdqgf
     1141 dllgeksirc isdseghvfw sgpapqcvks spvthcpdpe vmhgkkinkt qspyshndil
     1201 hiacnpgfim ngshlircht nnkwvpgvpt cirkafvgcq rpfrishgnh tggditrfsp
     1261 gmsilyscdq gyllvgeall lctyegtwnr papyckevnc sfpehtngiq nglepgrmyq
     1321 ygavvtlvce dgytlegspq sqcqedhrwn pplavcksps slapliagfs agvvalfclg
     1381 avtlrmilkh rernyytntn hkedvhleal dlysvdpysp an
//
LOCUS       XP_061015965            1413 aa            linear   MAM 02-DEC-2023
DEFINITION  complement receptor type 2 isoform X3 [Dama dama].
ACCESSION   XP_061015965
VERSION     XP_061015965.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159982.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1413
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1413
                     /product="complement receptor type 2 isoform X3"
                     /calculated_mol_wt=155604
     Region          10..274
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          295..524
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          549..784
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          729..1035
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          971..1224
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          <1157..1347
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     CDS             1..1413
                     /gene="CR2"
                     /coded_by="XM_061159982.1:108..4349"
                     /db_xref="GeneID:133068979"
ORIGIN      
        1 mgaagpiwvf ltllapgvlg qckslprypf akpkiqsdqs efavgetwey eclpgyfkks
       61 fivtclktsk wsnaqqvckr kpcsvprell hgsvhtpqgi mfgaritfsc dngyrliggs
      121 satcvfldnt vtwdtdlplc esipcepppa ilngdfyssn rdyfyygmvv tyqchvgqng
      181 kklfdlvgek siyctskdnq vgiwnspapq cipvvkcpip evengimesg frhsfslnds
      241 vmfkckpgft mkgsntvrcq pnskwnpplp kcfkgclppp htlhgnydql deeffavgqe
      301 vfyscepgyt ligtnpirct slgtwshlvp kcevkscddi pnqllngrvv tppnfqlgae
      361 vsfvcdkgfr lngqsssqcv segmrvfwsn kfpvcerifc dpppsikngr ssyhsgpval
      421 navvtyscps afrligekrl fciskdnvng iwdkappice yynrdsvcse pivpggyrik
      481 tsrppfrhgh svtfscyanf tmkgnktvwc qanrtwgptp lpicesdipv ecpspptian
      541 ghhtgesvas fapgltvtys cepgylifgk ntihclslgd wsdaaptcke alcepprpfl
      601 ngqikrptsf gvgatvnfsc negyrlqgpl ssqcvivgqr tfwtrmptce eifcpspppv
      661 lngrhtgtss vifpyghtvs ytcdpgpekg vsfiligert ihcttgsqkt gawsgpaprc
      721 elsvsevwcp ppqiprgqis sgqkdrysyn dtvvfacvfg ftmkgskavr cnaqgtweps
      781 ipvcekdcqa ppkilhgrke drhrvrfdpg tsikyscdlg yvlvgeesir ctpdgvwipt
      841 aptckvaece pvgkqvfkkp knqfirpdvn sscdegyrlg esvyqqcqgt ipwfmeirlc
      901 kditcppppa idngvhtgss sevvlygttv tytcnpgper gvkydliges tircisndqe
      961 tgiwsgpapt cnislpavqc spvnvanghk isgkeapysy ndsvilecdd gfilkgssqv
     1021 rckanntwdp eipvcekeas cqplkdgqep pdgslvipvn tscqdgyrkt gqhtyqkcqd
     1081 denavwfqki plceiincqs ppgikngrhr svlandfqyg nevfyecdqg fdllgeksir
     1141 cisdseghvf wsgpapqcvk sspvthcpdp evmhgkkink tqspyshndi lhiacnpgfi
     1201 mngshlirch tnnkwvpgvp tcirkafvgc qrpfrishgn htggditrfs pgmsilyscd
     1261 qgyllvgeal llctyegtwn rpapyckevn csfpehtngi qnglepgrmy qygavvtlvc
     1321 edgytlegsp qsqcqedhrw npplavcksp sslapliagf sagvvalfcl gavtlrmilk
     1381 hrernyytnt nhkedvhlea ldlysvdpys pan
//
LOCUS       XP_061015966            1095 aa            linear   MAM 02-DEC-2023
DEFINITION  complement receptor type 2 isoform X4 [Dama dama].
ACCESSION   XP_061015966
VERSION     XP_061015966.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159983.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1095
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..1095
                     /product="complement receptor type 2 isoform X4"
                     /calculated_mol_wt=119724
     Region          17..>211
                     /region_name="PHA02639"
                     /note="EEV host range protein; Provisional"
                     /db_xref="CDD:165022"
     Region          172..407
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          352..658
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          684..906
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          <839..1029
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     CDS             1..1095
                     /gene="CR2"
                     /coded_by="XM_061159983.1:105..3392"
                     /db_xref="GeneID:133068979"
ORIGIN      
        1 mgaagpiwvf ltllapgvlg ifcdpppsik ngrssyhsgp valnavvtys cpsafrlige
       61 krlfciskdn vngiwdkapp iceyynrdsv csepivpggy riktsrppfr hghsvtfscy
      121 anftmkgnkt vwcqanrtwg ptplpicesd ipvecpsppt ianghhtges vasfapgltv
      181 tyscepgyli fgkntihcls lgdwsdaapt ckealceppr pflngqikrp tsfgvgatvn
      241 fscnegyrlq gplssqcviv gqrtfwtrmp tceeifcpsp ppvlngrhtg tssvifpygh
      301 tvsytcdpgp ekgvsfilig ertihcttgs qktgawsgpa prcelsvsev wcpppqiprg
      361 qissgqkdry syndtvvfac vfgftmkgsk avrcnaqgtw epsipvcekd cqappkilhg
      421 rkedrhrvrf dpgtsikysc dlgyvlvgee sirctpdgvw iptaptckva ecepvgkqvf
      481 kkpknqfirp dvnsscdegy rlgesvyqqc qgtipwfmei rlckditcpp ppaidngvht
      541 gsssevvlyg ttvtytcnpg pergvkydli gestircisn dqetgiwsgp aptcnislpa
      601 vqcspvnvan ghkisgkeap ysyndsvile cddgfilkgs sqvrckannt wdpeipvcek
      661 gcqppsglhh gqhtggnrvl fvsgmtvdyt cdpgyllvgn rsiqcmpsgn wspsvprcee
      721 ascqplkdgq eppdgslvip vntscqdgyr ktgqhtyqkc qddenavwfq kiplceiinc
      781 qsppgikngr hrsvlandfq ygnevfyecd qgfdllgeks ircisdsegh vfwsgpapqc
      841 vksspvthcp dpevmhgkki nktqspyshn dilhiacnpg fimngshlir chtnnkwvpg
      901 vptcirkafv gcqrpfrish gnhtggditr fspgmsilys cdqgyllvge alllctyegt
      961 wnrpapycke vncsfpehtn giqnglepgr myqygavvtl vcedgytleg spqsqcqedh
     1021 rwnpplavck spsslaplia gfsagvvalf clgavtlrmi lkhrernyyt ntnhkedvhl
     1081 ealdlysvdp yspan
//
LOCUS       XP_061015967             623 aa            linear   MAM 02-DEC-2023
DEFINITION  complement decay-accelerating factor isoform X1 [Dama dama].
ACCESSION   XP_061015967
VERSION     XP_061015967.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159984.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..623
                     /product="complement decay-accelerating factor isoform X1"
                     /calculated_mol_wt=66852
     Region          36..93
                     /region_name="CCP"
                     /note="Domain abundant in complement control proteins;
                     SUSHI repeat; short complement-like repeat (SCR);
                     smart00032"
                     /db_xref="CDD:214478"
     Site            order(46,66)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          97..300
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          <295..>530
                     /region_name="Not5"
                     /note="CCR4-NOT transcriptional regulation complex, NOT5
                     subunit [Transcription]; COG5665"
                     /db_xref="CDD:444384"
     CDS             1..623
                     /gene="CD55"
                     /coded_by="XM_061159984.1:297..2168"
                     /db_xref="GeneID:133068980"
ORIGIN      
        1 msparprarv llsllgglgp qllllllrpp aasgdcglpp dvpnaqatlg srtsfaegqk
       61 vdykcnkgfv kvpgkadsvv cqnnkwsela efcnrscdfp trlrfaslkk sytqqnyfpe
      121 gstveyecrp gyirdpslsg nitclqnfmw skpegfckkr scpkpgeien ghvnittdil
      181 fgaeiyfscn tgyklvgaas afcaamgntv gwaeefpkcq eilcpeppkv dhgmiqekqn
      241 syaygqsvty kcmegftlhg essiyctved dqgvwsgplp qcretfynvi pkvpkptevn
      301 vpgtkvlstp qkpttvnvsa tetpstpqkp ttvnvpatei sptpqkptti nisatetppt
      361 pqkpttvnvp atetsptpqk pttvnvpate tsptpqkptt vnisatetpp tpqkpttvnv
      421 patetsptpq klitinssat kptlvsqtyt tvnvpatkvp spsqksstan dsamtawnsp
      481 isntvstaaq npimanastt tpttqrftpa kslltqnlka tqkstsihtt kglritqrlt
      541 sahvtaakst aiprtsprfh ttstpkgrgs apsvasiias gcvpvsviic iiilvkisrd
      601 sgksgsyytr edkthrcrdn hnw
//
LOCUS       XP_061015968             616 aa            linear   MAM 02-DEC-2023
DEFINITION  complement decay-accelerating factor isoform X2 [Dama dama].
ACCESSION   XP_061015968
VERSION     XP_061015968.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159985.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..616
                     /product="complement decay-accelerating factor isoform X2"
                     /calculated_mol_wt=66210
     Region          36..93
                     /region_name="CCP"
                     /note="Domain abundant in complement control proteins;
                     SUSHI repeat; short complement-like repeat (SCR);
                     smart00032"
                     /db_xref="CDD:214478"
     Site            order(46,66)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          97..300
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          <295..>530
                     /region_name="Not5"
                     /note="CCR4-NOT transcriptional regulation complex, NOT5
                     subunit [Transcription]; COG5665"
                     /db_xref="CDD:444384"
     CDS             1..616
                     /gene="CD55"
                     /coded_by="XM_061159985.1:299..2149"
                     /db_xref="GeneID:133068980"
ORIGIN      
        1 msparprarv llsllgglgp qllllllrpp aasgdcglpp dvpnaqatlg srtsfaegqk
       61 vdykcnkgfv kvpgkadsvv cqnnkwsela efcnrscdfp trlrfaslkk sytqqnyfpe
      121 gstveyecrp gyirdpslsg nitclqnfmw skpegfckkr scpkpgeien ghvnittdil
      181 fgaeiyfscn tgyklvgaas afcaamgntv gwaeefpkcq eilcpeppkv dhgmiqekqn
      241 syaygqsvty kcmegftlhg essiyctved dqgvwsgplp qcretfynvi pkvpkptevn
      301 vpgtkvlstp qkpttvnvsa tetpstpqkp ttvnvpatei sptpqkptti nisatetppt
      361 pqkpttvnvp atetsptpqk pttvnvpate tsptpqkptt vnisatetpp tpqkpttvnv
      421 patetsptpq klitinssat kptlvsqtyt tvnvpatkvp spsqksstan dsamtawnsp
      481 isntvstaaq npimanastt tpttqrftpa kslltqnlka tqkstsihtt kglritqrlt
      541 sahvtaakst aiprtsprfh ttstpkgrgs apsgcvpvsv iiciiilvki srdsgksgsy
      601 ytredkthrc rdnhnw
//
LOCUS       XP_061015969             613 aa            linear   MAM 02-DEC-2023
DEFINITION  complement decay-accelerating factor isoform X3 [Dama dama].
ACCESSION   XP_061015969
VERSION     XP_061015969.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159986.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..613
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..613
                     /product="complement decay-accelerating factor isoform X3"
                     /calculated_mol_wt=66291
     Region          36..93
                     /region_name="CCP"
                     /note="Domain abundant in complement control proteins;
                     SUSHI repeat; short complement-like repeat (SCR);
                     smart00032"
                     /db_xref="CDD:214478"
     Site            order(46,66)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          97..300
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          <295..>530
                     /region_name="Not5"
                     /note="CCR4-NOT transcriptional regulation complex, NOT5
                     subunit [Transcription]; COG5665"
                     /db_xref="CDD:444384"
     CDS             1..613
                     /gene="CD55"
                     /coded_by="XM_061159986.1:301..2142"
                     /db_xref="GeneID:133068980"
ORIGIN      
        1 msparprarv llsllgglgp qllllllrpp aasgdcglpp dvpnaqatlg srtsfaegqk
       61 vdykcnkgfv kvpgkadsvv cqnnkwsela efcnrscdfp trlrfaslkk sytqqnyfpe
      121 gstveyecrp gyirdpslsg nitclqnfmw skpegfckkr scpkpgeien ghvnittdil
      181 fgaeiyfscn tgyklvgaas afcaamgntv gwaeefpkcq eilcpeppkv dhgmiqekqn
      241 syaygqsvty kcmegftlhg essiyctved dqgvwsgplp qcretfynvi pkvpkptevn
      301 vpgtkvlstp qkpttvnvsa tetpstpqkp ttvnvpatei sptpqkptti nisatetppt
      361 pqkpttvnvp atetsptpqk pttvnvpate tsptpqkptt vnisatetpp tpqkpttvnv
      421 patetsptpq klitinssat kptlvsqtyt tvnvpatkvp spsqksstan dsamtawnsp
      481 isntvstaaq npimanastt tpttqrftpa kslltqnlka tqkstsihtt kglritqrlt
      541 sahvtaakst aiprtsprfh ttstpkgrgs apsvasiias gkcvflrvrr ichrfwiyns
      601 wkrmwffycl cch
//
LOCUS       XP_061015970             591 aa            linear   MAM 02-DEC-2023
DEFINITION  complement decay-accelerating factor isoform X4 [Dama dama].
ACCESSION   XP_061015970
VERSION     XP_061015970.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159987.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..591
                     /product="complement decay-accelerating factor isoform X4"
                     /calculated_mol_wt=63236
     Region          36..93
                     /region_name="CCP"
                     /note="Domain abundant in complement control proteins;
                     SUSHI repeat; short complement-like repeat (SCR);
                     smart00032"
                     /db_xref="CDD:214478"
     Site            order(46,66)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          97..300
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          <295..>530
                     /region_name="Not5"
                     /note="CCR4-NOT transcriptional regulation complex, NOT5
                     subunit [Transcription]; COG5665"
                     /db_xref="CDD:444384"
     CDS             1..591
                     /gene="CD55"
                     /coded_by="XM_061159987.1:299..2074"
                     /db_xref="GeneID:133068980"
ORIGIN      
        1 msparprarv llsllgglgp qllllllrpp aasgdcglpp dvpnaqatlg srtsfaegqk
       61 vdykcnkgfv kvpgkadsvv cqnnkwsela efcnrscdfp trlrfaslkk sytqqnyfpe
      121 gstveyecrp gyirdpslsg nitclqnfmw skpegfckkr scpkpgeien ghvnittdil
      181 fgaeiyfscn tgyklvgaas afcaamgntv gwaeefpkcq eilcpeppkv dhgmiqekqn
      241 syaygqsvty kcmegftlhg essiyctved dqgvwsgplp qcretfynvi pkvpkptevn
      301 vpgtkvlstp qkpttvnvsa tetpstpqkp ttvnvpatei sptpqkptti nisatetppt
      361 pqkpttvnvp atetsptpqk pttvnvpate tsptpqkptt vnisatetpp tpqkpttvnv
      421 patetsptpq klitinssat kptlvsqtyt tvnvpatkvp spsqksstan dsamtawnsp
      481 isntvstaaq npimanastt tpttqrftpa kslltqnlka tqkstsihtt kglritqrlt
      541 sahvtaakst aiprtsprfh ttstpkgrgs apsghmcitl tillmmlvtv g
//
LOCUS       XP_061015973             663 aa            linear   MAM 02-DEC-2023
DEFINITION  complement decay-accelerating factor isoform X5 [Dama dama].
ACCESSION   XP_061015973
VERSION     XP_061015973.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159990.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..663
                     /product="complement decay-accelerating factor isoform X5"
                     /calculated_mol_wt=71863
     Region          36..93
                     /region_name="CCP"
                     /note="Domain abundant in complement control proteins;
                     SUSHI repeat; short complement-like repeat (SCR);
                     smart00032"
                     /db_xref="CDD:214478"
     Site            order(46,66)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          97..300
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          <295..>530
                     /region_name="Not5"
                     /note="CCR4-NOT transcriptional regulation complex, NOT5
                     subunit [Transcription]; COG5665"
                     /db_xref="CDD:444384"
     CDS             1..663
                     /gene="CD55"
                     /coded_by="XM_061159990.1:164..2155"
                     /db_xref="GeneID:133068980"
ORIGIN      
        1 msparprarv llsllgglgp qllllllrpp aasgdcglpp dvpnaqatlg srtsfaegqk
       61 vdykcnkgfv kvpgkadsvv cqnnkwsela efcnrscdfp trlrfaslkk sytqqnyfpe
      121 gstveyecrp gyirdpslsg nitclqnfmw skpegfckkr scpkpgeien ghvnittdil
      181 fgaeiyfscn tgyklvgaas afcaamgntv gwaeefpkcq eilcpeppkv dhgmiqekqn
      241 syaygqsvty kcmegftlhg essiyctved dqgvwsgplp qcretfynvi pkvpkptevn
      301 vpgtkvlstp qkpttvnvsa tetpstpqkp ttvnvpatei sptpqkptti nisatetppt
      361 pqkpttvnvp atetsptpqk pttvnvpate tsptpqkptt vnisatetpp tpqkpttvnv
      421 patetsptpq klitinssat kptlvsqtyt tvnvpatkvp spsqksstan dsamtawnsp
      481 isntvstaaq npimanastt tpttqrftpa kslltqnlka tqkstsihtt kglritqrlt
      541 sahvtaakst aiprtsprfh ttstpkgrgs apsalttrvr tkhigvviti tgdaaevrpl
      601 viykrtyvyn idnfaydasn rwltepkklr rkcfacylvf kmrrnvhkar kdesvlesqs
      661 qhs
//
LOCUS       XP_061015974             420 aa            linear   MAM 02-DEC-2023
DEFINITION  complement decay-accelerating factor isoform X6 [Dama dama].
ACCESSION   XP_061015974
VERSION     XP_061015974.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159991.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..420
                     /product="complement decay-accelerating factor isoform X6"
                     /calculated_mol_wt=46531
     Region          36..93
                     /region_name="CCP"
                     /note="Domain abundant in complement control proteins;
                     SUSHI repeat; short complement-like repeat (SCR);
                     smart00032"
                     /db_xref="CDD:214478"
     Site            order(46,66)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          97..300
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     CDS             1..420
                     /gene="CD55"
                     /coded_by="XM_061159991.1:229..1491"
                     /db_xref="GeneID:133068980"
ORIGIN      
        1 msparprarv llsllgglgp qllllllrpp aasgdcglpp dvpnaqatlg srtsfaegqk
       61 vdykcnkgfv kvpgkadsvv cqnnkwsela efcnrscdfp trlrfaslkk sytqqnyfpe
      121 gstveyecrp gyirdpslsg nitclqnfmw skpegfckkr scpkpgeien ghvnittdil
      181 fgaeiyfscn tgyklvgaas afcaamgntv gwaeefpkcq eilcpeppkv dhgmiqekqn
      241 syaygqsvty kcmegftlhg essiyctved dqgvwsgplp qcretfynvi pkvpkptevn
      301 vpaakstaip rtsprfhtts tpkgrgsaps alttrvrtkh igvvititgd aaevrplviy
      361 krtyvynidn faydasnrwl tepkklrrkc facylvfkmr rnvhkarkde svlesqsqhs
//
LOCUS       XP_061015975             380 aa            linear   MAM 02-DEC-2023
DEFINITION  complement decay-accelerating factor isoform X7 [Dama dama].
ACCESSION   XP_061015975
VERSION     XP_061015975.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159992.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..380
                     /product="complement decay-accelerating factor isoform X7"
                     /calculated_mol_wt=41521
     Region          36..93
                     /region_name="CCP"
                     /note="Domain abundant in complement control proteins;
                     SUSHI repeat; short complement-like repeat (SCR);
                     smart00032"
                     /db_xref="CDD:214478"
     Site            order(46,66)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          97..300
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     CDS             1..380
                     /gene="CD55"
                     /coded_by="XM_061159992.1:234..1376"
                     /db_xref="GeneID:133068980"
ORIGIN      
        1 msparprarv llsllgglgp qllllllrpp aasgdcglpp dvpnaqatlg srtsfaegqk
       61 vdykcnkgfv kvpgkadsvv cqnnkwsela efcnrscdfp trlrfaslkk sytqqnyfpe
      121 gstveyecrp gyirdpslsg nitclqnfmw skpegfckkr scpkpgeien ghvnittdil
      181 fgaeiyfscn tgyklvgaas afcaamgntv gwaeefpkcq eilcpeppkv dhgmiqekqn
      241 syaygqsvty kcmegftlhg essiyctved dqgvwsgplp qcretfynvi pkvpkptevn
      301 vpaakstaip rtsprfhtts tpkgrgsaps vasiiasgcv pvsviiciii lvkisrdsgk
      361 sgsyytredk thrcrdnhnw
//
LOCUS       XP_061015976             379 aa            linear   MAM 02-DEC-2023
DEFINITION  complement decay-accelerating factor isoform X8 [Dama dama].
ACCESSION   XP_061015976
VERSION     XP_061015976.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159993.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..379
                     /product="complement decay-accelerating factor isoform X8"
                     /calculated_mol_wt=41450
     Region          36..93
                     /region_name="CCP"
                     /note="Domain abundant in complement control proteins;
                     SUSHI repeat; short complement-like repeat (SCR);
                     smart00032"
                     /db_xref="CDD:214478"
     Site            order(46,66)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          97..300
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     CDS             1..379
                     /gene="CD55"
                     /coded_by="XM_061159993.1:240..1379"
                     /db_xref="GeneID:133068980"
ORIGIN      
        1 msparprarv llsllgglgp qllllllrpp aasgdcglpp dvpnaqatlg srtsfaegqk
       61 vdykcnkgfv kvpgkadsvv cqnnkwsela efcnrscdfp trlrfaslkk sytqqnyfpe
      121 gstveyecrp gyirdpslsg nitclqnfmw skpegfckkr scpkpgeien ghvnittdil
      181 fgaeiyfscn tgyklvgaas afcaamgntv gwaeefpkcq eilcpeppkv dhgmiqekqn
      241 syaygqsvty kcmegftlhg essiyctved dqgvwsgplp qcretfynvi pkvpkptevn
      301 vpakstaipr tsprfhttst pkgrgsapsv asiiasgcvp vsviiciiil vkisrdsgks
      361 gsyytredkt hrcrdnhnw
//
LOCUS       XP_061015977             370 aa            linear   MAM 02-DEC-2023
DEFINITION  complement decay-accelerating factor isoform X9 [Dama dama].
ACCESSION   XP_061015977
VERSION     XP_061015977.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159994.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
     Protein         1..370
                     /product="complement decay-accelerating factor isoform X9"
                     /calculated_mol_wt=40959
     Region          36..93
                     /region_name="CCP"
                     /note="Domain abundant in complement control proteins;
                     SUSHI repeat; short complement-like repeat (SCR);
                     smart00032"
                     /db_xref="CDD:214478"
     Site            order(46,66)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          97..300
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     CDS             1..370
                     /gene="CD55"
                     /coded_by="XM_061159994.1:238..1350"
                     /db_xref="GeneID:133068980"
ORIGIN      
        1 msparprarv llsllgglgp qllllllrpp aasgdcglpp dvpnaqatlg srtsfaegqk
       61 vdykcnkgfv kvpgkadsvv cqnnkwsela efcnrscdfp trlrfaslkk sytqqnyfpe
      121 gstveyecrp gyirdpslsg nitclqnfmw skpegfckkr scpkpgeien ghvnittdil
      181 fgaeiyfscn tgyklvgaas afcaamgntv gwaeefpkcq eilcpeppkv dhgmiqekqn
      241 syaygqsvty kcmegftlhg essiyctved dqgvwsgplp qcretfynvi pkvpkptevn
      301 vpaakstaip rtsprfhtts tpkgrgsaps vasiiasgkc vflrvrrich rfwiynswkr
      361 mwffyclcch
//
LOCUS       XP_061015978             195 aa            linear   MAM 02-DEC-2023
DEFINITION  apolipoprotein R-like [Dama dama].
ACCESSION   XP_061015978
VERSION     XP_061015978.1
DBLINK      BioProject: PRJNA1045691
DBSOURCE    REFSEQ: accession XM_061159995.1
KEYWORDS    RefSeq.
SOURCE      Dama dama (fallow deer)
  ORGANISM  Dama dama
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Cervinae; Dama.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083694) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033118175.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/29/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Dama dama"
                     /isolate="Ldn47"
                     /isolation_source="Tissue"
                     /db_xref="taxon:30532"
                     /chromosome="14"
                     /sex="male"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.450387 N 0.285828 W"
                     /collection_date="2022-02-23"
